rank	Chr	Start	End	Ref	Alt	Func.refgene	Gene.refgene	GeneDetail.refgene	ExonicFunc.refgene	AAChange.refgene	Func.ensGene	Gene.ensGene	GeneDetail.ensGene	ExonicFunc.ensGene	AAChange.ensGene	phastConsElements46way	gwasCatalog	cytoband	tfbsConsSites	wgEncodeRegTfbsClustered	wgEncodeRegDnaseClustered	evofold	snp138	1000g2012feb_all	1000g2012apr_all	1000g2010nov_all	1000g2014sep_all	1000g2014sep_eur	1000g2014sep_eas	1000g2014sep_amr	1000g2014sep_afr	1000g2014sep_sas	1000g2012apr_eur	1000g2012apr_asn	1000g2012apr_amr	1000g2012apr_afr	exac03	popfreq_max	SIFT_score	SIFT_pred	Polyphen2_HDIV_score	Polyphen2_HDIV_pred	Polyphen2_HVAR_score	Polyphen2_HVAR_pred	LRT_score	LRT_pred	MutationTaster_score	MutationTaster_pred	MutationAssessor_score	MutationAssessor_pred	FATHMM_score	FATHMM_pred	RadialSVM_score	RadialSVM_pred	LR_score	LR_pred	VEST3_score	CADD_raw	CADD_phred	GERP++_RS	phyloP46way_placental	phyloP100way_vertebrate	SiPhy_29way_logOdds	cadd	caddgt10	avsift	esp6500_ea	esp6500_aa	cosmic67	cg69	clinvar_20140929	rank.score
1	3	111795803	111795803	G	T	exonic	TMPRSS7	NA	nonsynonymous SNV	TMPRSS7:NM_001042575:exon14:c.G1658T:p.R553I	exonic	ENSG00000176040	NA	nonsynonymous SNV	ENSG00000176040:ENST00000419127:exon14:c.G1658T:p.R553I,ENSG00000176040:ENST00000452346:exon16:c.G2036T:p.R679I	Score=525;Name=lod=181	NA	3q13.2	Score=844;Name=V$FOXJ2_02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	D	1.0	D	0.999	D	0.000	D	1.000	D	2.235	M	-2.48	D	0.750	D	0.819	D	0.884	5.143	32	6.11	2.906	8.810	17.651	5.142991	5.142991	0	NA	NA	NA	NA	NA	22.3333334
1	14	75472653	75472653	A	G	exonic	EIF2B2	NA	nonsynonymous SNV	EIF2B2:NM_014239:exon5:c.A682G:p.R228G	exonic	ENSG00000119718	NA	nonsynonymous SNV	ENSG00000119718:ENST00000554748:exon1:c.A46G:p.R16G,ENSG00000119718:ENST00000266126:exon5:c.A682G:p.R228G	Score=626;Name=lod=466	NA	14q24.3	Score=827;Name=V$FOXO3_01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000008236	NA	0	D	1.0	D	0.999	D	0.000	D	1.000	D	3.08	M	-3.96	D	1.064	D	0.940	D	0.955	3.76	19.09	4.36	1.065	2.543	12.131	3.760111	3.760111	0	NA	NA	NA	NA	NA	22.3333252
1	1	205744020	205744020	G	A	exonic	RAB7L1	NA	nonsynonymous SNV	RAB7L1:NM_001135663:exon1:c.C65T:p.S22L,RAB7L1:NM_001135662:exon2:c.C65T:p.S22L,RAB7L1:NM_003929:exon2:c.C65T:p.S22L	exonic	ENSG00000117280	NA	nonsynonymous SNV	ENSG00000117280:ENST00000414729:exon1:c.C65T:p.S22L,ENSG00000117280:ENST00000446390:exon1:c.C65T:p.S22L,ENSG00000117280:ENST00000235932:exon2:c.C65T:p.S22L,ENSG00000117280:ENST00000367139:exon2:c.C65T:p.S22L,ENSG00000117280:ENST00000528078:exon2:c.C65T:p.S22L	Score=472;Name=lod=111	NA	1q32.1	NA	Name=ZBTB7A_(SC-34508)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0000663	NA	0.03	D	0.999	D	0.96	D	0.000	D	1.000	D	4.085	H	-1.71	D	0.898	D	0.825	D	0.885	5.579	35	5.71	2.692	5.399	17.613	5.5793	5.5793	0	NA	NA	NA	NA	NA	22.3332671
2	12	121416797	121416797	G	A	exonic	HNF1A	NA	nonsynonymous SNV	HNF1A:NM_000545:exon1:c.G226A:p.D76N	exonic	ENSG00000135100	NA	nonsynonymous SNV	ENSG00000135100:ENST00000257555:exon1:c.G226A:p.D76N,ENSG00000135100:ENST00000400024:exon1:c.G226A:p.D76N,ENSG00000135100:ENST00000402929:exon1:c.G226A:p.D76N,ENSG00000135100:ENST00000538646:exon1:c.G226A:p.D76N,ENSG00000135100:ENST00000540108:exon1:c.G226A:p.D76N,ENSG00000135100:ENST00000541395:exon1:c.G226A:p.D76N,ENSG00000135100:ENST00000541924:exon1:c.G226A:p.D76N,ENSG00000135100:ENST00000544413:exon1:c.G226A:p.D76N	Score=456;Name=lod=95	NA	12q24.31	Score=950;Name=V$GATA1_01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.03	D	0.999	D	0.994	D	0.000	D	1.000	D	1.7	L	-4.98	D	1.099	D	0.947	D	0.163	4.842	27.6	4.34	1.954	6.435	15.836	4.84233	4.84233	0.01	NA	NA	NA	NA	NA	21.3333334
2	19	2415775	2415775	C	A	exonic	TMPRSS9	NA	nonsynonymous SNV	TMPRSS9:NM_182973:exon10:c.C1579A:p.H527N	exonic	ENSG00000178297	NA	nonsynonymous SNV	ENSG00000178297:ENST00000332578:exon10:c.C1579A:p.H527N	Score=343;Name=lod=33	NA	19p13.3	NA	Name=CCNT2,Pol2(phosphoS2)	Name=3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00004201	NA	0	D	0.993	D	0.936	D	0.000	D	1.000	D	3.42	M	0.12	T	0.164	D	0.457	T	0.486	3.381	17.4	3.8	1.976	5.665	14.415	3.38052	3.38052	0	NA	NA	NA	NA	NA	21.3332914
2	16	72050942	72050942	G	A	exonic	DHODH	NA	nonsynonymous SNV	DHODH:NM_001361:exon4:c.G454A:p.G152R	exonic	ENSG00000102967	NA	nonsynonymous SNV	ENSG00000102967:ENST00000219240:exon4:c.G454A:p.G152R,ENSG00000102967:ENST00000572887:exon4:c.G454A:p.G152R,ENSG00000102967:ENST00000576145:exon4:c.G370A:p.G124R	Score=505;Name=lod=150	NA	16q22.2	NA	NA	NA	NA	rs267606766	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00009937	0.0001	0	D	1.0	D	1.0	D	0.000	D	1.000	D	4.64	H	-4.22	D	1.059	D	0.976	D	0.989	1.93	12.41	5.82	2.757	9.135	19.089	1.929849	1.929849	0	0.00012	0	NA	NA	CLINSIG=pathogenic;CLNDBN=Miller_syndrome;CLNREVSTAT=single;CLNACC=RCV000018294.26;CLNDSDB=MedGen:OMIM:Orphanet:SNOMED_CT;CLNDSDBID=C0265257:263750:ORPHA246:66038001	21.333114
2	13	110855918	110855918	C	G	exonic	COL4A1	NA	nonsynonymous SNV	COL4A1:NM_001845:exon18:c.G994C:p.G332R	exonic	ENSG00000187498	NA	nonsynonymous SNV	ENSG00000187498:ENST00000375820:exon18:c.G994C:p.G332R,ENSG00000187498:ENST00000543140:exon18:c.G994C:p.G332R	Score=410;Name=lod=62	NA	13q34	NA	Name=ZNF263	NA	NA	rs150182714	0.0005	0.0005	NA	0.000199681	0.001	NA	NA	NA	NA	0.0013	NA	NA	NA	0.00004942	0.0013	0.04	D	1.0	D	1.0	D	0.000	D	1.000	D	3.515	H	-4.63	D	1.032	D	0.985	D	0.991	2.269	13.54	4.79	2.376	5.196	17.816	2.269008	2.269008	0.09	0.000233	0	NA	NA	NA	21.332051
2	11	77553595	77553595	G	C	exonic	AAMDC	NA	nonsynonymous SNV	AAMDC:NM_024684:exon2:c.G53C:p.G18A	exonic	ENSG00000087884	NA	nonsynonymous SNV	ENSG00000087884:ENST00000393427:exon2:c.G53C:p.G18A,ENSG00000087884:ENST00000525034:exon2:c.G110C:p.G37A,ENSG00000087884:ENST00000526164:exon2:c.G53C:p.G18A,ENSG00000087884:ENST00000532481:exon2:c.G53C:p.G18A,ENSG00000087884:ENST00000533193:exon2:c.G53C:p.G18A,ENSG00000087884:ENST00000304716:exon3:c.G53C:p.G18A,ENSG00000087884:ENST00000525409:exon3:c.G53C:p.G18A,ENSG00000087884:ENST00000526415:exon3:c.G53C:p.G18A,ENSG00000087884:ENST00000527134:exon3:c.G53C:p.G18A	Score=633;Name=lod=500	NA	11q14.1	NA	Name=c-Fos,c-Jun	Name=47	NA	rs138381967	0.0005	0.0005	NA	0.000199681	0.001	NA	NA	NA	NA	0.0013	NA	NA	NA	0.0002	0.0013	0.04	D	0.999	D	0.912	D	0.000	D	1.000	D	2.005	M	0.7	T	0.109	D	0.558	D	0.695	4.276	22.3	4.67	2.941	6.477	14.855	4.276383	4.276383	0.04	0.000466	0.000227	NA	NA	NA	21.3316674
3	7	47331594	47331594	G	A	exonic	TNS3	NA	nonsynonymous SNV	TNS3:NM_022748:exon27:c.C3887T:p.T1296M	exonic	ENSG00000136205	NA	nonsynonymous SNV	ENSG00000136205:ENST00000355730:exon24:c.C3167T:p.T1056M,ENSG00000136205:ENST00000311160:exon27:c.C3887T:p.T1296M,ENSG00000136205:ENST00000398879:exon27:c.C3887T:p.T1296M	Score=243;Name=lod=13	NA	7p12.3	Score=728;Name=V$PAX4_04	Name=Pol2	Name=124	NA	rs41280696	0.0023	0.0023	0.001	0.00179712	0.006	NA	0.0043	NA	NA	0.004	NA	0.01	NA	0.0046	0.01	0.02	D	1.0	D	0.964	D	0.020	N	1.000	D	1.795	L	-3.05	D	0.782	D	0.844	D	0.364	3.88	19.72	5.86	2.775	6.828	17.680	3.880412	3.880412	0.01	0.008402	0.00161	NA	NA	NA	21.3143314
4	19	17396344	17396344	G	A	exonic	ANKLE1	NA	nonsynonymous SNV	ANKLE1:NM_152363:exon7:c.G1481A:p.R494Q	exonic	ENSG00000160117	NA	nonsynonymous SNV	ENSG00000160117:ENST00000394458:exon7:c.G1481A:p.R494Q,ENSG00000160117:ENST00000404085:exon7:c.G1469A:p.R490Q,ENSG00000160117:ENST00000594072:exon7:c.G1370A:p.R457Q,ENSG00000160117:ENST00000598347:exon7:c.G1403A:p.R468Q	Score=548;Name=lod=225	NA	19p13.11	Score=874;Name=V$TAL1ALPHAE47_01	NA	NA	NA	rs77683348	0.01	0.01	0.012	0.0101837	0.0199	0.006	0.013	0.003	0.0123	0.02	0.01	0.01	0.0041	0.0175	0.027	0	D	1.0	D	0.999	D	0.000	D	1.000	D	3.045	M	-3.52	D	0.550	D	0.801	D	0.278	4.286	22.4	4.35	2.252	8.502	14.417	4.285566	4.285566	0	0.026977	0.004085	NA	NA	NA	21.2689564
5	9	140777306	140777306	C	G	exonic	CACNA1B	NA	nonsynonymous SNV	CACNA1B:NM_000718:exon3:c.C501G:p.N167K,CACNA1B:NM_001243812:exon3:c.C501G:p.N167K	exonic	ENSG00000148408	NA	nonsynonymous SNV	ENSG00000148408:ENST00000277551:exon3:c.C501G:p.N167K,ENSG00000148408:ENST00000371355:exon3:c.C501G:p.N167K,ENSG00000148408:ENST00000371357:exon3:c.C501G:p.N167K,ENSG00000148408:ENST00000371363:exon3:c.C501G:p.N167K,ENSG00000148408:ENST00000371372:exon3:c.C501G:p.N167K	Score=572;Name=lod=281	NA	9q34.3	NA	Name=SUZ12,NRSF	Name=9	NA	rs4422842	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4999	0.49	0.02	D	1.0	D	0.999	D	0.000	D	1.000	D	4.925	H	-5.66	D	1.009	D	0.987	D	0.542	1.491	10.93	-4.66	-0.938	-1.175	13.215	1.490893	1.490893	0.03	NA	NA	NA	0.486	NA	20.8334334
6	12	7280850	7280850	C	T	exonic	RBP5	NA	nonsynonymous SNV	RBP5:NM_031491:exon2:c.G238A:p.G80R	exonic	ENSG00000139194	NA	nonsynonymous SNV	ENSG00000139194:ENST00000266560:exon2:c.G238A:p.G80R,ENSG00000139194:ENST00000542370:exon2:c.G238A:p.G80R	Score=391;Name=lod=52	NA	12p13.31	NA	Name=GABP,TAF1,Pol2	Name=7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.01	D	0.999	D	0.981	D	0.000	D	1.000	D	2.29	M	1.49	T	-0.663	T	0.190	T	0.307	2.962	15.87	3.55	2.270	3.664	16.422	2.961973	2.961973	0.01	NA	NA	NA	NA	NA	20.3333334
6	20	44579206	44579206	C	T	exonic	ZNF335	NA	nonsynonymous SNV	ZNF335:NM_022095:exon21:c.G3218A:p.R1073Q	exonic	ENSG00000198026	NA	nonsynonymous SNV	ENSG00000198026:ENST00000426788:exon18:c.G2753A:p.R918Q,ENSG00000198026:ENST00000322927:exon21:c.G3218A:p.R1073Q	Score=644;Name=lod=551	NA	20q13.12	NA	Name=Pol2	Name=8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000008252	NA	0.01	D	1.0	D	0.998	D	0.000	D	1.000	D	2.475	M	2.31	T	-0.902	T	0.137	T	0.803	4.953	28.8	4.82	2.681	7.239	17.438	4.952853	4.952853	0	NA	NA	NA	NA	NA	20.3333251
6	6	35259091	35259091	G	T	exonic	ZNF76	NA	nonsynonymous SNV	ZNF76:NM_003427:exon8:c.G662T:p.G221V	exonic	ENSG00000065029	NA	nonsynonymous SNV	ENSG00000065029:ENST00000440666:exon7:c.G584T:p.G195V,ENSG00000065029:ENST00000339411:exon8:c.G662T:p.G221V,ENSG00000065029:ENST00000373953:exon8:c.G662T:p.G221V,ENSG00000065029:ENST00000469195:exon8:c.G662T:p.G221V	Score=637;Name=lod=517	NA	6p21.31	Score=878;Name=V$AREB6_01	NA	Name=5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0000286	NA	0	D	1.0	D	0.992	D	0.001	D	1.000	D	2.51	M	1.9	T	-0.866	T	0.151	T	0.751	5.209	33	5.11	2.816	9.601	18.069	5.208544	5.208544	0	NA	NA	NA	NA	NA	20.3333048
6	2	204053267	204053267	G	C	exonic	NBEAL1	NA	nonsynonymous SNV	NBEAL1:NM_001114132:exon44:c.G6691C:p.A2231P	exonic	ENSG00000144426	NA	nonsynonymous SNV	ENSG00000144426:ENST00000414576:exon7:c.G736C:p.A246P,ENSG00000144426:ENST00000449802:exon44:c.G6691C:p.A2231P	Score=592;Name=lod=338	NA	2q33.2	Score=932;Name=V$LMO2COM_01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000058	NA	0.16	T	0.997	D	0.95	D	0.000	D	1.000	D	2.08	M	-1.44	T	0.198	D	0.649	D	0.578	5.15	32	5.85	2.773	9.751	19.761	5.150183	5.150183	0.04	NA	NA	NA	NA	NA	20.3332754
6	6	38256069	38256069	G	A	exonic	BTBD9	NA	nonsynonymous SNV	BTBD9:NM_152733:exon7:c.C1229T:p.P410L,BTBD9:NM_001099272:exon8:c.C1433T:p.P478L,BTBD9:NM_001172418:exon8:c.C1343T:p.P448L,BTBD9:NM_052893:exon9:c.C1433T:p.P478L	exonic	ENSG00000183826	NA	nonsynonymous SNV	ENSG00000183826:ENST00000408958:exon6:c.C1229T:p.P410L,ENSG00000183826:ENST00000314100:exon7:c.C1229T:p.P410L,ENSG00000183826:ENST00000403056:exon7:c.C1433T:p.P478L,ENSG00000183826:ENST00000419706:exon8:c.C1343T:p.P448L,ENSG00000183826:ENST00000481247:exon8:c.C1433T:p.P478L	Score=505;Name=lod=150	NA	6p21.2	NA	NA	NA	NA	rs375379024	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0001	0.0001	0	D	1.0	D	1.0	D	0.000	D	1.000	D	2.68	M	-4.91	D	1.105	D	0.960	D	0.636	3.745	19.01	5.31	1.636	9.323	15.660	3.744885	3.744885	0	0.000118	0	NA	NA	NA	20.3331154
6	7	33061694	33061694	T	G	exonic	NT5C3A	NA	nonsynonymous SNV	NT5C3A:NM_001002010:exon4:c.A340C:p.K114Q,NT5C3A:NM_001002009:exon5:c.A223C:p.K75Q,NT5C3A:NM_016489:exon5:c.A223C:p.K75Q,NT5C3A:NM_001166118:exon6:c.A187C:p.K63Q	exonic	ENSG00000122643	NA	nonsynonymous SNV	ENSG00000122643:ENST00000242210:exon4:c.A340C:p.K114Q,ENSG00000122643:ENST00000405342:exon4:c.A223C:p.K75Q,ENSG00000122643:ENST00000409787:exon4:c.A223C:p.K75Q,ENSG00000122643:ENST00000396152:exon5:c.A223C:p.K75Q,ENSG00000122643:ENST00000381626:exon6:c.A187C:p.K63Q,ENSG00000122643:ENST00000409467:exon6:c.A187C:p.K63Q	Score=575;Name=lod=289	NA	7p14.3	Score=798;Name=V$COMP1_01	NA	NA	NA	rs144452782	0.0005	0.0005	NA	0.000599042	0.003	NA	NA	NA	NA	0.0013	NA	NA	NA	0.001	0.0019	0.16	T	0.999	D	0.989	D	0.000	D	1.000	D	2.14	M	-1.9	D	0.474	D	0.725	D	0.225	4.197	21.8	5.4	2.058	4.731	15.418	4.196983	4.196983	0.09	0.001862	0.000683	NA	NA	NA	20.3274714
7	1	32674927	32674927	T	C	exonic	DCDC2B	NA	nonsynonymous SNV	DCDC2B:NM_001099434:exon1:c.T233C:p.V78A	exonic	ENSG00000222046	NA	nonsynonymous SNV	ENSG00000222046:ENST00000409358:exon1:c.T233C:p.V78A	Score=489;Name=lod=130	NA	1p35.1	NA	Name=Pol2	NA	NA	rs144804850	0.0032	0.0032	0.01	0.00139776	0.005	NA	0.0029	NA	NA	0.01	NA	0.0028	NA	0.0053	0.01	0	D	1.0	D	1.0	D	.	.	1.000	D	3.045	M	-4.22	D	0.919	D	0.936	D	0.861	4.771	26.8	5.16	2.078	7.399	14.958	4.770833	4.770833	0	0.008095	0.001212	NA	NA	NA	20.3149384
8	12	30878976	30878976	G	C	exonic	CAPRIN2	NA	nonsynonymous SNV	CAPRIN2:NM_001002259:exon9:c.C1829G:p.P610R,CAPRIN2:NM_001206856:exon9:c.C1829G:p.P610R,CAPRIN2:NM_023925:exon9:c.C1829G:p.P610R,CAPRIN2:NM_032156:exon9:c.C1829G:p.P610R	exonic	ENSG00000110888	NA	nonsynonymous SNV	ENSG00000110888:ENST00000433722:exon6:c.C1067G:p.P356R,ENSG00000110888:ENST00000308433:exon8:c.C830G:p.P277R,ENSG00000110888:ENST00000251071:exon9:c.C1829G:p.P610R,ENSG00000110888:ENST00000298892:exon9:c.C1829G:p.P610R,ENSG00000110888:ENST00000395805:exon9:c.C1829G:p.P610R,ENSG00000110888:ENST00000417045:exon9:c.C1829G:p.P610R,ENSG00000110888:ENST00000537108:exon10:c.C1586G:p.P529R	Score=432;Name=lod=76	NA	12p11.21	NA	Name=p300,CEBPB,p300_(N-15),eGFP-FOS,STAT3,c-Jun,GATA-2,c-Fos,JunD	Name=113	NA	rs73079976	0.01	0.01	0.003	0.0111821	0.0109	NA	0.0173	0.0008	0.0327	0.01	NA	0.01	NA	0.0092	0.01	0.01	D	1.0	D	1.0	D	0.001	D	0.980	D	1.65	L	2.21	T	0.305	D	0.569	D	0.82	3.816	19.38	4.72	1.348	4.493	15.950	3.816391	3.816391	0	0.008721	0.001135	NA	0.043	NA	20.3045124
9	2	170129547	170129547	C	T	exonic	LRP2	NA	nonsynonymous SNV	LRP2:NM_004525:exon15:c.G2006A:p.G669D	exonic	ENSG00000081479	NA	nonsynonymous SNV	ENSG00000081479:ENST00000443831:exon14:c.G1799A:p.G600D,ENSG00000081479:ENST00000263816:exon15:c.G2006A:p.G669D	Score=602;Name=lod=373	NA	2q31.1	NA	NA	NA	NA	rs34291900	0.02	0.02	0.013	0.014976	0.0368	NA	0.013	0.0015	0.0276	0.04	NA	0.02	0.002	0.0285	0.04	0.07	T	1.0	D	1.0	D	0.000	D	1.000	D	2.58	M	-2.33	D	0.205	D	0.520	D	0.465	4.937	28.6	5.38	2.681	7.729	19.496	4.937022	4.937022	0	0.035233	0.005674	NA	NA	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117514.2;CLNDSDB=.;CLNDSDBID=.	20.2328004
9	1	104117921	104117921	G	A	exonic	AMY2B	NA	nonsynonymous SNV	AMY2B:NM_020978:exon8:c.G955A:p.G319R	exonic	ENSG00000240038	NA	nonsynonymous SNV	ENSG00000240038:ENST00000477657:exon7:c.G955A:p.G319R,ENSG00000240038:ENST00000361355:exon8:c.G955A:p.G319R	Score=637;Name=lod=516	NA	1p21.1	Score=767;Name=V$HTF_01	NA	NA	NA	rs140978983	0.02	0.02	0.008	0.0173722	0.0457	NA	0.0389	0.0023	0.0112	0.04	NA	0.04	0.002	0.023	0.04	0	D	1.0	D	1.0	D	0.000	D	1.000	D	3.655	H	.	.	0.440	D	0.592	D	0.521	4.701	26.1	5.26	2.462	6.711	18.939	4.701339	4.701339	0	0.033388	0.006355	NA	0.022	NA	20.2312454
10	6	111913262	111913262	C	T	exonic	TRAF3IP2	NA	nonsynonymous SNV	TRAF3IP2:NM_001164281:exon2:c.G28A:p.D10N,TRAF3IP2:NM_147686:exon2:c.G28A:p.D10N	exonic	ENSG00000056972	NA	nonsynonymous SNV	ENSG00000056972:ENST00000359831:exon2:c.G28A:p.D10N,ENSG00000056972:ENST00000368761:exon2:c.G28A:p.D10N,ENSG00000056972:ENST00000340026:exon3:c.G55A:p.D19N	Score=493;Name=lod=135	Name=Psoriatic arthritis,Psoriasis	6q21	Score=682;Name=V$P53_01	NA	Name=70	NA	rs33980500	0.08	0.08	0.075	0.0836661	0.0855	0.004	0.1196	0.143	0.0583	0.09	0.01	0.13	0.12	0.0825	0.14	0	D	1.0	D	1.0	D	0.000	D	0.000	P	2.045	M	0.66	T	-0.609	T	0.245	T	0.14	4.785	26.9	5.5	2.588	5.038	17.582	4.785261	4.785261	0	0.077442	0.14049	NA	0.058	CLINSIG=other;CLNDBN=Psoriasis_susceptibility_13;CLNREVSTAT=single;CLNACC=RCV000023605.2;CLNDSDB=MedGen:OMIM;CLNDSDBID=C3279754:614070	20.0878914
11	17	21319208	21319208	C	T	exonic	KCNJ12,KCNJ18	NA	nonsynonymous SNV	KCNJ18:NM_001194958:exon3:c.C554T:p.A185V,KCNJ12:NM_021012:exon3:c.C554T:p.A185V	exonic	ENSG00000184185	NA	nonsynonymous SNV	ENSG00000184185:ENST00000331718:exon3:c.C554T:p.A185V,ENSG00000184185:ENST00000583088:exon3:c.C554T:p.A185V	Score=523;Name=lod=178	NA	17p11.2	Score=798;Name=V$YY1_02	NA	NA	NA	rs73979896	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4643	0.11	0.02	D	0.984	D	0.435	B	0.000	D	1.000	D	2.34	M	-3.76	D	0.890	D	0.851	D	0.905	4.568	24.8	5.32	2.496	7.680	18.998	4.568141	4.568141	0.04	NA	NA	NA	0.101	NA	19.8690334
12	17	21319087	21319087	G	A	exonic	KCNJ12,KCNJ18	NA	nonsynonymous SNV	KCNJ18:NM_001194958:exon3:c.G433A:p.G145S,KCNJ12:NM_021012:exon3:c.G433A:p.G145S	exonic	ENSG00000184185	NA	nonsynonymous SNV	ENSG00000184185:ENST00000331718:exon3:c.G433A:p.G145S,ENSG00000184185:ENST00000583088:exon3:c.G433A:p.G145S	Score=598;Name=lod=358	NA	17p11.2	NA	NA	NA	NA	rs75029097	NA	NA	NA	0.000199681	NA	0.001	NA	NA	NA	NA	NA	NA	NA	0.4905	0.087	0.01	D	1.0	D	1.0	D	0.000	D	1.000	D	4.135	H	-7.9	D	0.899	D	0.997	D	0.982	5.047	29.9	5.23	2.448	9.690	18.791	5.047022	5.047022	0.01	NA	NA	NA	0.087	NA	19.8428334
12	17	21319943	21319943	A	G	exonic	KCNJ12,KCNJ18	NA	nonsynonymous SNV	KCNJ18:NM_001194958:exon3:c.A1289G:p.E430G,KCNJ12:NM_021012:exon3:c.A1289G:p.E430G	exonic	ENSG00000184185	NA	nonsynonymous SNV	ENSG00000184185:ENST00000331718:exon3:c.A1289G:p.E430G,ENSG00000184185:ENST00000583088:exon3:c.A1289G:p.E430G	Score=500;Name=lod=144	NA	17p11.2	Score=860;Name=V$P300_01	NA	NA	NA	rs5021699	NA	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4972	0.3	0.04	D	1.0	D	0.999	D	0.023	N	1.000	D	2.175	M	-2.63	D	0.810	D	0.829	D	0.594	3.516	17.96	5.41	2.066	9.091	15.454	3.515652	3.515652	0.06	NA	NA	NA	0.304	NA	19.8361334
13	1	160011512	160011512	G	A	exonic	KCNJ10	NA	nonsynonymous SNV	KCNJ10:NM_002241:exon2:c.C811T:p.R271C	exonic	ENSG00000177807	NA	nonsynonymous SNV	ENSG00000177807:ENST00000368089:exon2:c.C811T:p.R271C	Score=651;Name=lod=591	NA	1q23.2	NA	NA	NA	NA	rs1130183	0.02	0.02	0.016	0.0147764	0.0477	NA	0.0259	NA	0.0082	0.05	NA	0.03	NA	0.0457	0.066	0.02	D	0.999	D	0.862	P	0.000	D	1.000	D	1.585	L	-2.94	D	0.651	D	0.775	D	0.246	3.549	18.1	5.44	2.837	2.919	16.811	3.54874	3.54874	0.05	0.065465	0.012937	NA	0.087	CLINSIG=probable-non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000117320.2|RCV000126411.1;CLNDSDB=.|.;CLNDSDBID=.|.	19.6744684
14	19	40421270	40421270	C	T	exonic	FCGBP	NA	nonsynonymous SNV	FCGBP:NM_003890:exon5:c.G2651A:p.G884D	exonic	ENSG00000090920	NA	nonsynonymous SNV	ENSG00000090920:ENST00000221347:exon5:c.G2651A:p.G884D	Score=449;Name=lod=89	NA	19q13.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000009676	NA	0	D	1.0	D	1.0	D	0.000	D	1.000	D	2.91	M	-0.15	T	0.129	D	0.496	T	0.699	5.266	33	4.94	2.449	7.747	17.284	5.265948	5.265948	NA	NA	NA	NA	NA	NA	19.3333237
14	9	35733406	35733406	T	C	exonic	CREB3	NA	nonsynonymous SNV	CREB3:NM_006368:exon4:c.T359C:p.L120P	exonic	ENSG00000107175	NA	nonsynonymous SNV	ENSG00000107175:ENST00000353704:exon4:c.T359C:p.L120P	NA	NA	9p13.3	NA	Name=CTCF_(C-20),Sin3Ak-20,CTCF,PU.1,Pol2	Name=130	NA	rs138981526	0	0	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0004	0.0002	0	D	1.0	D	0.998	D	0.001	N	0.950	D	2.295	M	-1.86	D	0.443	D	0.700	D	0.532	3.212	16.76	3.62	0.768	3.688	8.684	3.212464	3.212464	0	0.000233	0	NA	NA	NA	19.3327004
14	1	37947235	37947235	A	T	exonic	ZC3H12A	NA	nonsynonymous SNV	ZC3H12A:NM_025079:exon4:c.A617T:p.K206M	exonic	ENSG00000163874	NA	nonsynonymous SNV	ENSG00000163874:ENST00000373087:exon4:c.A617T:p.K206M	Score=534;Name=lod=198	NA	1p34.3	NA	Name=Egr-1	Name=29	NA	rs201388317	NA	NA	NA	0.000199681	0.001	NA	NA	NA	NA	NA	NA	NA	NA	0.00007415	0.0001	0.03	D	1.0	D	0.994	D	0.000	D	1.000	D	1.935	M	0.89	T	-0.630	T	0.240	T	0.665	4.957	28.9	5.42	2.054	5.267	15.466	4.957246	4.957246	0	0.000116	0	NA	NA	NA	19.3321433
15	11	117979606	117979606	G	C	exonic	TMPRSS4	NA	nonsynonymous SNV	TMPRSS4:NM_001173552:exon6:c.G458C:p.C153S,TMPRSS4:NM_001083947:exon7:c.G563C:p.C188S,TMPRSS4:NM_001173551:exon7:c.G572C:p.C191S,TMPRSS4:NM_019894:exon7:c.G578C:p.C193S	exonic	ENSG00000137648	NA	nonsynonymous SNV	ENSG00000137648:ENST00000522151:exon6:c.G419C:p.C140S,ENSG00000137648:ENST00000523251:exon6:c.G458C:p.C153S,ENSG00000137648:ENST00000437212:exon7:c.G578C:p.C193S,ENSG00000137648:ENST00000519236:exon7:c.G572C:p.C191S,ENSG00000137648:ENST00000522307:exon7:c.G137C:p.C46S,ENSG00000137648:ENST00000522824:exon7:c.G563C:p.C188S,ENSG00000137648:ENST00000534111:exon7:c.G572C:p.C191S	Score=391;Name=lod=52	NA	11q23.3	NA	NA	NA	NA	rs45441097	0.0032	0.0032	0.001	0.00259585	0.006	NA	0.0086	NA	0.001	0.01	NA	0.01	NA	0.0042	0.01	0	D	1.0	D	0.999	D	0.000	D	1.000	D	2.97	M	0.26	T	0.898	D	0.961	D	0.893	4.036	20.7	4.93	2.564	5.377	15.172	4.036391	4.036391	0	0.005121	0.000909	NA	0.051	NA	19.3180124
15	13	45589616	45589616	C	G	exonic	KIAA1704	NA	nonsynonymous SNV	KIAA1704:NM_018559:exon6:c.C590G:p.P197R	exonic	ENSG00000133114	NA	nonsynonymous SNV	ENSG00000133114:ENST00000357537:exon5:c.C80G:p.P27R,ENSG00000133114:ENST00000361121:exon6:c.C590G:p.P197R,ENSG00000133114:ENST00000379151:exon6:c.C590G:p.P197R,ENSG00000133114:ENST00000497558:exon6:c.C590G:p.P197R	Score=599;Name=lod=361	NA	13q14.12	NA	Name=c-Fos,GATA-2	Name=27	NA	rs151309735	0.0018	0.0018	0.002	0.00199681	0.006	NA	NA	NA	0.0041	0.004	NA	0.0028	NA	0.004	0.0077	0.05	D	0.999	D	0.984	D	0.000	D	1.000	D	2.42	M	.	.	-0.205	T	0.374	T	0.592	4.548	24.6	5.51	2.746	7.192	18.782	4.548355	4.548355	0.01	0.007674	0.001589	NA	NA	NA	19.3156594
16	6	33281504	33281504	C	A	exonic	TAPBP	NA	nonsynonymous SNV	TAPBP:NM_003190:exon2:c.G175T:p.D59Y,TAPBP:NM_172208:exon2:c.G175T:p.D59Y,TAPBP:NM_172209:exon2:c.G175T:p.D59Y	exonic	ENSG00000231925	NA	nonsynonymous SNV	ENSG00000231925:ENST00000426633:exon2:c.G175T:p.D59Y,ENSG00000231925:ENST00000434618:exon2:c.G175T:p.D59Y,ENSG00000231925:ENST00000456592:exon2:c.G175T:p.D59Y,ENSG00000231925:ENST00000475304:exon2:c.G175T:p.D59Y,ENSG00000231925:ENST00000489157:exon2:c.G175T:p.D59Y	Score=321;Name=lod=27	NA	6p21.32	NA	Name=EBF1_(C-8),TBP,BAF155,CEBPB,Pol2,EBF	Name=111	NA	rs45583737	0.0014	0.0014	0.003	0.00339457	0.0089	NA	0.0029	0.0008	0.0051	0.004	NA	NA	NA	0.0051	0.0076	0	D	1.0	D	0.996	D	0.000	D	0.996	D	2.28	M	1.14	T	-0.631	T	0.222	T	0.777	1.795	11.96	4.15	2.300	1.961	12.127	1.795345	1.795345	0	0.007572	0.001365	NA	NA	NA	19.3117614
16	4	96762158	96762158	G	C	exonic	PDHA2	NA	nonsynonymous SNV	PDHA2:NM_005390:exon1:c.G857C:p.R286P	exonic	ENSG00000163114	NA	nonsynonymous SNV	ENSG00000163114:ENST00000295266:exon1:c.G857C:p.R286P	Score=488;Name=lod=128	NA	4q22.3	NA	NA	NA	NA	rs147966234	0.0037	0.0037	0.002	0.00479233	0.007	NA	0.0043	NA	0.0143	0.01	NA	0.01	NA	0.0091	0.011	0	D	1.0	D	1.0	D	0.000	D	1.000	D	4.685	H	-6.13	D	0.850	D	0.988	D	0.493	3.384	17.42	3.17	0.785	3.345	8.906	3.384493	3.384493	0	0.010581	0.000681	NA	NA	NA	19.3066524
17	6	7581032	7581032	C	T	exonic	DSP	NA	nonsynonymous SNV	DSP:NM_004415:exon23:c.C4609T:p.R1537C	exonic	ENSG00000096696	NA	nonsynonymous SNV	ENSG00000096696:ENST00000379802:exon23:c.C4609T:p.R1537C	Score=304;Name=lod=23	NA	6p24.3	NA	Name=FOXA1_(C-20),FOXA1_(SC-101058),FOXA2_(SC-6554)	Name=9	NA	rs28763967	0.01	0.01	0.002	0.00359425	0.0159	NA	0.0014	0.0008	NA	0.01	NA	0.01	0.002	0.0091	0.014	0.04	D	1.0	D	0.965	D	0.000	D	1.000	D	1.1	L	-0.87	T	-0.245	T	0.393	T	0.328	3.224	16.8	5.85	2.772	2.051	15.812	3.224244	3.224244	0.01	0.014302	0.002951	NA	0.014	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000038052.1;CLNDSDB=.;CLNDSDBID=.	19.2940314
17	22	18566288	18566288	C	G	exonic	PEX26	NA	nonsynonymous SNV	PEX26:NM_001127649:exon3:c.C457G:p.L153V,PEX26:NM_001199319:exon4:c.C457G:p.L153V,PEX26:NM_017929:exon4:c.C457G:p.L153V	exonic	ENSG00000215193	NA	nonsynonymous SNV	ENSG00000215193:ENST00000399744:exon3:c.C457G:p.L153V,ENSG00000215193:ENST00000428061:exon3:c.C457G:p.L153V,ENSG00000215193:ENST00000329627:exon4:c.C457G:p.L153V	Score=358;Name=lod=38	NA	22q11.21	NA	NA	NA	NA	rs12484657	0.01	0.01	0.003	0.00439297	0.0119	NA	0.0144	NA	NA	0.01	NA	0.01	NA	0.01	0.018	0.05	D	1.0	D	0.998	D	0.391	U	0.652	N	2.34	M	-3.2	D	0.569	D	0.801	D	0.423	3.523	17.99	5.47	2.724	2.405	16.856	3.522788	3.522788	0.03	0.017558	0.003631	NA	0.072	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000081925.1;CLNDSDB=.;CLNDSDBID=.	19.2938754
18	12	6458350	6458350	A	G	exonic	SCNN1A	NA	nonsynonymous SNV	SCNN1A:NM_001159576:exon9:c.T1654C:p.W552R,SCNN1A:NM_001038:exon10:c.T1477C:p.W493R,SCNN1A:NM_001159575:exon10:c.T1546C:p.W516R	exonic	ENSG00000111319	NA	nonsynonymous SNV	ENSG00000111319:ENST00000540037:exon8:c.T577C:p.W193R,ENSG00000111319:ENST00000360168:exon9:c.T1654C:p.W552R,ENSG00000111319:ENST00000228916:exon10:c.T1477C:p.W493R,ENSG00000111319:ENST00000358945:exon10:c.T1543C:p.W515R,ENSG00000111319:ENST00000543768:exon10:c.T1546C:p.W516R	Score=358;Name=lod=38	NA	12p13.31	NA	NA	NA	NA	rs5742912	0.01	0.01	0.004	0.0133786	0.0249	NA	0.0259	0.003	0.0204	0.02	NA	0.03	0.002	0.0182	0.03	0	D	1.0	D	1.0	D	0.000	D	1.000	A	3.305	M	-0.15	T	0.047	D	0.266	T	0.939	3.934	20.1	5.19	1.984	5.594	11.522	3.933539	3.933539	0	0.023721	0.00522	NA	0.007	CLINSIG=pathogenic;CLNDBN=Bronchiectasis_with_or_without_elevated_sweat_chloride_2;CLNREVSTAT=single;CLNACC=RCV000009851.1;CLNDSDB=MedGen:OMIM;CLNDSDBID=C2751666:613021	19.2665124
19	1	43223489	43223489	C	T	exonic	LEPRE1	NA	nonsynonymous SNV	LEPRE1:NM_001146289:exon5:c.G1045A:p.G349R,LEPRE1:NM_001243246:exon5:c.G1045A:p.G349R,LEPRE1:NM_022356:exon5:c.G1045A:p.G349R	exonic	ENSG00000117385	NA	nonsynonymous SNV	ENSG00000117385:ENST00000236040:exon5:c.G1045A:p.G349R,ENSG00000117385:ENST00000296388:exon5:c.G1045A:p.G349R,ENSG00000117385:ENST00000397054:exon5:c.G1045A:p.G349R	Score=437;Name=lod=80	NA	1p34.2	NA	NA	Name=7	NA	rs6700677	0.04	0.04	0.046	0.0549121	0.0388	0.001	0.0389	0.112	0.0613	0.04	NA	0.05	0.1	0.0448	0.11	0	D	1.0	D	1.0	D	0.000	D	1.000	D	2.89	M	-1.66	D	-0.536	T	0.067	T	0.492	4.366	23	5.84	2.769	7.487	17.643	4.365718	4.365718	0	0.043488	0.108488	ID=COSM1342736,COSM1342737;OCCURENCE=2(large_intestine)	0.058	NA	19.2062454
20	22	35478529	35478529	G	A	exonic	ISX	NA	nonsynonymous SNV	ISX:NM_001008494:exon2:c.G248A:p.R83Q	exonic	ENSG00000175329	NA	nonsynonymous SNV	ENSG00000175329:ENST00000308700:exon2:c.G248A:p.R83Q,ENSG00000175329:ENST00000404699:exon3:c.G248A:p.R83Q	Score=366;Name=lod=41	NA	22q12.3	NA	NA	NA	NA	rs8140287	0.03	0.03	0.022	0.0307508	0.0557	0.003	0.0317	0.0023	0.0716	0.06	0.0017	0.02	NA	0.043	0.06	0.16	T	1.0	D	0.999	D	0.000	D	1.000	D	3.47	M	-4.29	D	0.107	D	0.743	D	0.374	4.916	28.4	4.94	2.545	8.758	15.683	4.916181	4.916181	0	0.053721	0.011575	NA	0.022	NA	19.1809124
20	5	89914925	89914925	T	G	exonic	GPR98	NA	nonsynonymous SNV	GPR98:NM_032119:exon4:c.T380G:p.L127R	exonic	ENSG00000164199	NA	nonsynonymous SNV	ENSG00000164199:ENST00000405460:exon4:c.T380G:p.L127R	Score=630;Name=lod=485	NA	5q14.3	Score=846;Name=V$IRF1_01	NA	NA	NA	rs41311333	0.02	0.02	0.016	0.0163738	0.0497	NA	0.0346	NA	0.0082	0.05	NA	0.04	NA	0.0618	0.05	0	D	0.999	D	0.972	D	0.000	D	1.000	D	1.935	M	1.35	T	-0.952	T	0.044	T	0.281	3.935	20.1	5.43	2.063	7.492	15.490	3.935363	3.935363	0	0.045868	0.006656	NA	0.022	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000039577.1|RCV000125292.1;CLNDSDB=.|.;CLNDSDBID=.|.	19.1759654
21	17	45214605	45214605	T	C	exonic	CDC27	NA	nonsynonymous SNV	CDC27:NM_001114091:exon14:c.A1844G:p.H615R,CDC27:NM_001256:exon14:c.A1826G:p.H609R	exonic	ENSG00000004897	NA	nonsynonymous SNV	ENSG00000004897:ENST00000446365:exon13:c.A1643G:p.H548R,ENSG00000004897:ENST00000066544:exon14:c.A1826G:p.H609R,ENSG00000004897:ENST00000527547:exon14:c.A1823G:p.H608R,ENSG00000004897:ENST00000531206:exon14:c.A1844G:p.H615R	Score=658;Name=lod=631	NA	17q21.32	Score=721;Name=V$SRF_01	Name=STAT1,CTCF,TAF1,CTCFL_(SC-98982),ZBTB33,GABP,TAF7_(SQ-8),SUZ12,IRF3,ZNF274,EBF,ZZZ3,GCN5,YY1,c-Jun,c-Fos,GATA-2	Name=148	NA	rs76926116	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4987	0.022	0	D	0.848	P	0.513	P	0.000	D	1.000	D	3.425	M	0.32	T	-0.114	T	0.354	T	0.89	4.752	26.6	5.81	2.228	6.308	14.108	4.752269	4.752269	0	NA	NA	NA	0.029	NA	18.8346334
21	17	21319121	21319121	C	T	exonic	KCNJ12,KCNJ18	NA	nonsynonymous SNV	KCNJ18:NM_001194958:exon3:c.C467T:p.P156L,KCNJ12:NM_021012:exon3:c.C467T:p.P156L	exonic	ENSG00000184185	NA	nonsynonymous SNV	ENSG00000184185:ENST00000331718:exon3:c.C467T:p.P156L,ENSG00000184185:ENST00000583088:exon3:c.C467T:p.P156L	Score=455;Name=lod=94	NA	17p11.2	Score=894;Name=V$USF_Q6	NA	NA	NA	rs1714864	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.4997	0.5	0.01	D	1.0	D	1.0	D	0.000	D	1.000	D	2.795	M	-3.43	D	-1.369	T	0.000	T	0.942	4.638	25.4	5.32	2.496	7.680	18.998	4.637763	4.637763	0.01	NA	NA	NA	0.341	NA	18.8336334
21	4	82369284	82369284	T	G	exonic	RASGEF1B	NA	nonsynonymous SNV	RASGEF1B:NM_152545:exon5:c.A593C:p.D198A	exonic	ENSG00000138670	NA	nonsynonymous SNV	ENSG00000138670:ENST00000504863:exon2:c.A128C:p.D43A,ENSG00000138670:ENST00000335927:exon4:c.A467C:p.D156A,ENSG00000138670:ENST00000264400:exon5:c.A593C:p.D198A,ENSG00000138670:ENST00000509081:exon5:c.A590C:p.D197A	Score=558;Name=lod=248	NA	4q21.21	NA	Name=FOSL1_(SC-183)	Name=7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00006589	NA	0.06	T	0.972	D	0.844	P	0.000	D	1.000	D	2.085	M	1.58	T	-0.886	T	0.156	T	0.912	4.644	25.5	5.31	2.243	5.820	15.100	4.643658	4.643658	0.01	NA	NA	NA	NA	NA	18.8332675
21	3	154886383	154886383	A	G	exonic	MME	NA	nonsynonymous SNV	MME:NM_000902:exon19:c.A1883G:p.N628S,MME:NM_007287:exon19:c.A1883G:p.N628S,MME:NM_007288:exon19:c.A1883G:p.N628S,MME:NM_007289:exon19:c.A1883G:p.N628S	exonic	ENSG00000196549	NA	nonsynonymous SNV	ENSG00000196549:ENST00000360490:exon19:c.A1883G:p.N628S,ENSG00000196549:ENST00000460393:exon19:c.A1883G:p.N628S,ENSG00000196549:ENST00000462745:exon19:c.A1883G:p.N628S,ENSG00000196549:ENST00000492661:exon19:c.A1883G:p.N628S,ENSG00000196549:ENST00000493237:exon19:c.A1883G:p.N628S	Score=496;Name=lod=138	NA	3q25.2	Score=862;Name=V$OCT1_07	NA	NA	NA	rs181745819	0.0005	0.0005	NA	0.000399361	0.001	NA	0.0014	NA	NA	NA	NA	0.0028	NA	0.00003301	0.0028	0.12	T	0.976	D	0.739	P	0.000	D	1.000	D	1	L	-1.64	D	0.011	D	0.512	D	0.258	3.865	19.64	5.25	1.988	7.082	15.182	3.865446	3.865446	0.07	NA	NA	NA	NA	NA	18.8323004
21	11	18047154	18047154	C	T	exonic	TPH1	NA	nonsynonymous SNV	TPH1:NM_004179:exon7:c.G898A:p.A300T	exonic	ENSG00000129167	NA	nonsynonymous SNV	ENSG00000129167:ENST00000250018:exon7:c.G898A:p.A300T,ENSG00000129167:ENST00000341556:exon7:c.G898A:p.A300T	Score=659;Name=lod=635	NA	11p15.1	NA	NA	NA	NA	rs145855109	NA	NA	NA	0.000399361	NA	NA	NA	NA	0.002	NA	NA	NA	NA	0.0007	0.0007	0.02	D	0.808	P	0.298	B	0.000	D	1.000	D	3.28	M	-6.41	D	1.111	D	0.981	D	0.979	4.904	28.3	5.71	2.692	7.773	19.834	4.904046	4.904046	0.03	0.000699	0	NA	NA	NA	18.8319344
21	18	19153835	19153835	C	T	exonic	ESCO1	NA	nonsynonymous SNV	ESCO1:NM_052911:exon4:c.G970A:p.E324K	exonic	ENSG00000141446	NA	nonsynonymous SNV	ENSG00000141446:ENST00000269214:exon4:c.G970A:p.E324K,ENSG00000141446:ENST00000383276:exon4:c.G970A:p.E324K	Score=586;Name=lod=322	NA	18q11.2	Score=824;Name=V$FOXO3_01	Name=MafK_(ab50322)	NA	NA	rs148536942	0.0023	0.0023	0.001	0.00119808	0.003	NA	0.0029	0.0008	NA	0.0026	NA	0.01	0.002	0.0012	0.01	0.03	D	0.996	D	0.837	P	0.000	D	0.998	D	1.935	M	1.44	T	-0.398	T	0.296	T	0.561	4.078	21	5.74	2.715	5.038	18.116	4.078169	4.078169	NA	0.001628	0.000227	NA	NA	NA	18.8275054
22	16	2287649	2287649	A	C	exonic	DNASE1L2	NA	nonsynonymous SNV	DNASE1L2:NM_001374:exon5:c.A590C:p.D197A	exonic	ENSG00000167968	NA	nonsynonymous SNV	ENSG00000167968:ENST00000564065:exon4:c.A590C:p.D197A,ENSG00000167968:ENST00000569184:exon4:c.A581C:p.D194A,ENSG00000167968:ENST00000320700:exon5:c.A590C:p.D197A,ENSG00000167968:ENST00000382437:exon5:c.A527C:p.D176A,ENSG00000167968:ENST00000567494:exon5:c.A590C:p.D197A	Score=403;Name=lod=58	NA	16p13.3	NA	Name=Pol2	Name=10	NA	rs62621282	0.0041	0.0041	NA	0.00259585	0.005	NA	0.0115	NA	NA	0.01	NA	0.01	NA	0.0026	0.01	0.14	T	0.984	D	0.831	P	0.000	D	0.528	N	2.56	M	-1.28	T	0.199	D	0.502	D	0.388	2.54	14.45	4.37	1.833	4.650	9.904	2.539914	2.539914	0.02	0.002908	0.000761	NA	NA	NA	18.8228254
23	21	33975515	33975515	C	T	exonic	C21orf59	NA	nonsynonymous SNV	C21orf59:NM_021254:exon5:c.G622A:p.V208M	exonic	ENSG00000159079,ENSG00000265590	NA	nonsynonymous SNV	ENSG00000159079:ENST00000540881:exon4:c.G454A:p.V152M,ENSG00000159079:ENST00000290155:exon5:c.G622A:p.V208M,ENSG00000159079:ENST00000382549:exon5:c.G622A:p.V208M,ENSG00000159079:ENST00000440966:exon5:c.G622A:p.V208M,ENSG00000265590:ENST00000553001:exon5:c.G622A:p.V208M	Score=554;Name=lod=239	NA	21q22.11	Score=959;Name=V$MZF1_01	NA	NA	NA	rs61735781	0.0041	0.0041	0.007	0.00379393	0.0099	NA	0.0014	NA	0.0082	0.01	NA	NA	NA	0.0045	0.011	0.02	D	0.999	D	0.907	P	0.000	D	0.999	D	2.77	M	.	.	0.014	D	0.434	T	0.604	4.317	22.6	5.38	2.677	2.548	19.501	4.316671	4.316671	0.01	0.007209	0.001362	NA	0.065	NA	18.8117244
24	2	241808314	241808314	C	T	exonic	AGXT	NA	nonsynonymous SNV	AGXT:NM_000030:exon1:c.C32T:p.P11L	exonic	ENSG00000172482	NA	nonsynonymous SNV	ENSG00000172482:ENST00000307503:exon1:c.C32T:p.P11L	Score=251;Name=lod=14	NA	2q37.3	NA	Name=HEY1,HDAC2_(SC-6296)	NA	NA	rs34116584	0.11	0.11	0.086	0.0808706	0.2048	NA	0.1311	0.0363	0.0613	0.21	NA	0.14	0.05	0.1545	0.21	0.02	D	1.0	D	1.0	D	0.000	D	0.000	P	2.43	M	-2.36	D	-1.138	T	0.003	T	0.523	2.737	15.11	4.42	2.014	6.302	11.635	2.736816	2.736816	0.06	0.203419	0.061164	NA	0.094	CLINSIG=other;CLNDBN=Primary_hyperoxaluria\x2c_type_I;CLNREVSTAT=mult;CLNACC=RCV000005995.2;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet:Orphanet:SNOMED_CT;CLNDSDBID=NBK1283:C0268164:259900:ORPHA416:ORPHA93598:65520001	18.7706144
25	15	45695445	45695445	C	G	exonic	SPATA5L1	NA	nonsynonymous SNV	SPATA5L1:NM_024063:exon1:c.C818G:p.S273C	exonic	ENSG00000171763	NA	nonsynonymous SNV	ENSG00000171763:ENST00000305560:exon1:c.C818G:p.S273C,ENSG00000171763:ENST00000531970:exon1:c.C818G:p.S273C,ENSG00000171763:ENST00000559860:exon1:c.C818G:p.S273C	NA	NA	15q21.1	NA	Name=CCNT2,HA-E2F1,TAF1	Name=114	NA	rs143453038	0.02	0.02	0.02	0.00998403	0.0298	NA	0.0202	0.0023	0.0031	0.03	NA	0.02	0.02	0.0487	0.03	0	D	0.974	D	0.812	P	0.015	N	1.000	N	2.09	M	-3.22	D	0.109	D	0.662	D	0.106	3.999	20.5	4.9	2.536	7.247	16.826	3.999282	3.999282	0.01	0.020671	0.005012	NA	0.043	NA	18.7341624
25	1	78392446	78392446	G	A	exonic	NEXN	NA	nonsynonymous SNV	NEXN:NM_001172309:exon7:c.G541A:p.G181R,NEXN:NM_144573:exon8:c.G733A:p.G245R	exonic	ENSG00000162614	NA	nonsynonymous SNV	ENSG00000162614:ENST00000330010:exon7:c.G541A:p.G181R,ENSG00000162614:ENST00000401035:exon7:c.G541A:p.G181R,ENSG00000162614:ENST00000440324:exon7:c.G691A:p.G231R,ENSG00000162614:ENST00000457030:exon7:c.G691A:p.G231R,ENSG00000162614:ENST00000334785:exon8:c.G733A:p.G245R	Score=558;Name=lod=247	NA	1p31.1	Score=933;Name=V$STAT_01	Name=MEF2A,PU.1	Name=20	NA	rs1166698	0.2	0.2	0.194	0.150759	0.2107	0.38	0.1167	0.0106	0.0665	0.2	0.41	0.14	0.01	0.1846	0.41	0.31	T	1.0	D	1.0	D	0.000	D	0.000	P	2.63	M	-0.06	T	-0.291	T	0.460	T	0.422	4.442	23.7	5.64	2.643	8.915	19.694	4.442499	4.442499	0.02	0.207311	0.046582	NA	0.152	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000041182.1|RCV000127191.1;CLNDSDB=.|.;CLNDSDBID=.|.	18.7307224
26	7	66453476	66453476	A	G	exonic	SBDS	NA	nonsynonymous SNV	SBDS:NM_016038:exon5:c.T635C:p.I212T	exonic	ENSG00000126524	NA	nonsynonymous SNV	ENSG00000126524:ENST00000246868:exon5:c.T635C:p.I212T	Score=363;Name=lod=40	NA	7q11.21	NA	NA	NA	NA	rs79344818	0.02	0.02	0.018	0.0169728	0.0457	NA	0.036	0.0045	0.0082	0.04	NA	0.04	0.002	0.0248	0.04	0.01	D	0.154	B	0.599	P	0.000	D	1.000	D	2.805	M	-4.1	D	0.405	D	0.718	D	0.281	3.525	18	2.65	0.394	6.487	5.317	3.524518	3.524518	0.05	0.038837	0.006582	NA	0.014	CLINSIG=non-pathogenic;CLNDBN=Shwachman_syndrome;CLNREVSTAT=single;CLNACC=RCV000020733.1;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet:SNOMED_CT;CLNDSDBID=NBK1756:C0272170:260400:ORPHA811:89454001	18.7239964
27	19	46181392	46181392	G	C	exonic	GIPR	NA	nonsynonymous SNV	GIPR:NM_000164:exon12:c.G1060C:p.E354Q	exonic	ENSG00000010310	NA	nonsynonymous SNV	ENSG00000010310:ENST00000304207:exon11:c.G952C:p.E318Q,ENSG00000010310:ENST00000263281:exon12:c.G1060C:p.E354Q,ENSG00000010310:ENST00000590918:exon12:c.G1060C:p.E354Q	Score=578;Name=lod=297	Name=Obesity	19q13.32	Score=874;Name=V$NMYC_01	Name=c-Myc,CTCF_(SC-5916),CTCF	Name=21	NA	rs1800437	0.18	0.18	0.165	0.161142	0.2137	0.2073	0.1268	0.1233	0.135	0.21	0.22	0.14	0.13	0.2019	0.22	0.07	T	1.0	D	0.999	D	0.000	D	0.021	P	2.545	M	0.9	T	-1.097	T	0.000	T	0.134	4.468	23.9	3.14	0.954	3.265	11.062	4.46782	4.46782	0.01	0.203488	0.113482	NA	0.167	NA	18.7142454
28	20	61451332	61451332	C	T	exonic	COL9A3	NA	nonsynonymous SNV	COL9A3:NM_001853:exon5:c.C307T:p.R103W	exonic	ENSG00000092758	NA	nonsynonymous SNV	ENSG00000092758:ENST00000452372:exon4:c.C196T:p.R66W,ENSG00000092758:ENST00000343916:exon5:c.C307T:p.R103W	Score=457;Name=lod=96	NA	20q13.33	Score=795;Name=V$OLF1_01	NA	NA	NA	rs61734651	0.03	0.03	0.026	0.0219649	0.0636	NA	0.0274	0.0038	0.0225	0.07	NA	0.04	0.0041	0.0479	0.07	0.02	D	0.997	D	0.761	P	0.052	U	0.816	D	2.92	M	-1.78	D	0.001	D	0.323	T	0.598	2.993	15.98	3.59	2.106	0.835	8.333	2.992611	2.992611	0.01	0.067209	0.014526	NA	0.058	CLINSIG=other;CLNDBN=Intervertebral_disc_disease\x2c_susceptibility_to;CLNREVSTAT=single;CLNACC=RCV000018677.1;CLNDSDB=.;CLNDSDBID=.	18.6546244
29	12	52913668	52913668	C	T	exonic	KRT5	NA	nonsynonymous SNV	KRT5:NM_000424:exon1:c.G413A:p.G138E	exonic	ENSG00000186081	NA	nonsynonymous SNV	ENSG00000186081:ENST00000252242:exon1:c.G413A:p.G138E,ENSG00000186081:ENST00000549420:exon2:c.G83A:p.G28E,ENSG00000186081:ENST00000551275:exon2:c.G308A:p.G103E	Score=451;Name=lod=91	NA	12q13.13	NA	Name=Pol2	NA	NA	rs11170164	0.03	0.03	0.029	0.0265575	0.0676	NA	0.0173	0.0045	0.0481	0.07	NA	0.01	0.0041	0.0582	0.074	0.01	D	0.959	D	0.503	P	0.000	D	0.999	D	3.09	M	-1.02	T	0.002	D	0.391	T	0.521	3.255	16.92	5.45	2.559	.	19.286	3.25526	3.25526	0.01	0.074302	0.016114	NA	0.007	CLINSIG=untested;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000056586.1;CLNDSDB=.;CLNDSDBID=.	18.6332314
30	8	101718965	101718965	G	A	exonic	PABPC1	NA	nonsynonymous SNV	PABPC1:NM_002568:exon11:c.C1516T:p.R506C	exonic	ENSG00000070756	NA	nonsynonymous SNV	ENSG00000070756:ENST00000517990:exon1:c.C43T:p.R15C,ENSG00000070756:ENST00000522658:exon2:c.C157T:p.R53C,ENSG00000070756:ENST00000318607:exon11:c.C1516T:p.R506C,ENSG00000070756:ENST00000519004:exon12:c.C1381T:p.R461C,ENSG00000070756:ENST00000522387:exon12:c.C1420T:p.R474C	Score=624;Name=lod=459	NA	8q22.3	NA	Name=CTCF_(SC-5916)	Name=2	NA	rs62513921	NA	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4118	NA	0.03	D	0.97	D	0.711	P	0.000	D	1.000	D	2.095	M	0.89	T	-0.833	T	0.164	T	0.616	2.967	15.89	4.52	1.427	6.013	9.489	2.966636	2.966636	0	NA	NA	NA	NA	NA	18.4215334
31	17	45214527	45214527	T	C	exonic	CDC27	NA	nonsynonymous SNV	CDC27:NM_001114091:exon14:c.A1922G:p.Y641C,CDC27:NM_001256:exon14:c.A1904G:p.Y635C	exonic	ENSG00000004897	NA	nonsynonymous SNV	ENSG00000004897:ENST00000446365:exon13:c.A1721G:p.Y574C,ENSG00000004897:ENST00000066544:exon14:c.A1904G:p.Y635C,ENSG00000004897:ENST00000527547:exon14:c.A1901G:p.Y634C,ENSG00000004897:ENST00000531206:exon14:c.A1922G:p.Y641C	Score=658;Name=lod=631	NA	17q21.32	NA	Name=IRF3,SUZ12,ZNF274,ZZZ3,EBF,c-Fos,GATA-2,c-Jun,YY1,CTCFL_(SC-98982),TAF1	Name=148	NA	rs62075618	NA	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4763	0.087	0	D	0.985	D	0.79	P	0.000	D	0.000	P	3.91	H	0.26	T	0.329	D	0.469	T	0.933	5.004	29.4	5.98	2.293	6.308	14.409	5.004463	5.004463	0	NA	NA	NA	0.087	NA	18.3570334
32	9	37711382	37711382	G	C	exonic	FRMPD1	NA	nonsynonymous SNV	FRMPD1:NM_014907:exon5:c.G398C:p.R133P	exonic	ENSG00000070601	NA	nonsynonymous SNV	ENSG00000070601:ENST00000377765:exon5:c.G398C:p.R133P,ENSG00000070601:ENST00000539465:exon5:c.G398C:p.R133P	Score=472;Name=lod=111	NA	9p13.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	D	1.0	D	0.984	D	0.000	D	1.000	D	2.53	M	0.63	T	-0.384	T	0.311	T	0.948	4.135	21.3	5.31	2.486	5.331	14.482	4.135137	4.135137	0	NA	NA	NA	NA	NA	18.3333334
32	11	45891977	45891977	T	G	exonic	CRY2	NA	nonsynonymous SNV	CRY2:NM_001127457:exon9:c.T1260G:p.I420M,CRY2:NM_021117:exon9:c.T1506G:p.I502M	exonic	ENSG00000121671	NA	nonsynonymous SNV	ENSG00000121671:ENST00000417225:exon9:c.T1260G:p.I420M,ENSG00000121671:ENST00000443527:exon9:c.T1506G:p.I502M	Score=538;Name=lod=204	NA	11p11.2	Score=764;Name=V$HOX13_01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	D	0.923	P	0.85	P	0.000	D	0.997	D	3.075	M	.	.	0.057	D	0.461	T	0.487	3.783	19.2	-2.88	-0.421	-1.309	15.300	3.78254	3.78254	0	NA	NA	NA	NA	NA	18.3333334
32	16	23456431	23456431	G	C	exonic	COG7	NA	nonsynonymous SNV	COG7:NM_153603:exon3:c.C373G:p.L125V	exonic	ENSG00000168434	NA	nonsynonymous SNV	ENSG00000168434:ENST00000307149:exon3:c.C373G:p.L125V	Score=533;Name=lod=195	NA	16p12.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.04	D	0.999	D	0.964	D	0.000	D	1.000	D	2.22	M	0.01	T	-0.175	T	0.430	T	0.925	4.863	27.8	5.55	2.601	6.753	18.498	4.863331	4.863331	0	NA	NA	NA	NA	NA	18.3333334
32	5	140209597	140209597	G	T	exonic	PCDHA6	NA	nonsynonymous SNV	PCDHA6:NM_018909:exon1:c.G1921T:p.D641Y,PCDHA6:NM_031848:exon1:c.G1921T:p.D641Y	exonic	ENSG00000081842	NA	nonsynonymous SNV	ENSG00000081842:ENST00000529310:exon1:c.G1921T:p.D641Y	Score=259;Name=lod=15	NA	5q31.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00002487	NA	0	D	1.0	D	0.99	D	0.002	U	1.000	D	3.355	M	0.69	T	0.010	D	0.385	T	0.531	1.802	11.98	3.98	2.216	5.619	16.652	1.801839	1.801839	0	NA	NA	NA	NA	NA	18.3333085
32	18	21494777	21494777	C	A	exonic	LAMA3	NA	nonsynonymous SNV	LAMA3:NM_001127718:exon20:c.C2602A:p.P868T,LAMA3:NM_000227:exon21:c.C2770A:p.P924T,LAMA3:NM_001127717:exon57:c.C7429A:p.P2477T,LAMA3:NM_198129:exon58:c.C7597A:p.P2533T	exonic	ENSG00000053747	NA	nonsynonymous SNV	ENSG00000053747:ENST00000587184:exon20:c.C2602A:p.P868T,ENSG00000053747:ENST00000269217:exon21:c.C2770A:p.P924T,ENSG00000053747:ENST00000399516:exon57:c.C7429A:p.P2477T,ENSG00000053747:ENST00000313654:exon58:c.C7597A:p.P2533T	Score=361;Name=lod=39	NA	18q11.2	NA	NA	NA	NA	rs201547061	0.0009	0.0009	NA	0.000399361	NA	NA	0.0029	NA	NA	0.0013	NA	0.0028	NA	0.00004956	0.0028	0.01	D	1.0	D	1.0	D	.	.	1.000	D	2.52	M	-0.81	T	0.325	D	0.608	D	0.742	3.39	17.44	4.87	2.513	4.889	18.201	3.39001	3.39001	0	NA	NA	NA	NA	NA	18.3332838
32	12	21028181	21028181	T	A	exonic	SLCO1B3	NA	nonsynonymous SNV	SLCO1B3:NM_019844:exon9:c.T740A:p.I247K	exonic	ENSG00000111700,ENSG00000257046	NA	nonsynonymous SNV	ENSG00000111700:ENST00000544370:exon3:c.T212A:p.I71K,ENSG00000257046:ENST00000540229:exon7:c.T740A:p.I247K,ENSG00000111700:ENST00000553473:exon7:c.T740A:p.I247K,ENSG00000111700:ENST00000261196:exon8:c.T740A:p.I247K,ENSG00000111700:ENST00000540853:exon8:c.T740A:p.I247K,ENSG00000111700:ENST00000381545:exon9:c.T740A:p.I247K	Score=355;Name=lod=37	NA	12p12.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0001	NA	0	D	1.0	D	0.998	D	0.000	D	1.000	D	3.42	M	0.87	T	-0.245	T	0.323	T	0.823	2.492	14.29	3.92	1.653	6.000	11.126	2.492348	2.492348	0	NA	NA	NA	NA	NA	18.3332334
32	17	39620376	39620376	C	T	exonic	KRT32	NA	nonsynonymous SNV	KRT32:NM_002278:exon5:c.G950A:p.R317H	exonic	ENSG00000108759	NA	nonsynonymous SNV	ENSG00000108759:ENST00000225899:exon5:c.G950A:p.R317H	Score=399;Name=lod=56	NA	17q21.2	NA	NA	NA	NA	rs144111267	0.0005	0.0005	NA	0.00179712	NA	NA	NA	0.0068	NA	NA	NA	NA	0.002	0.001	0.0089	0.01	D	1.0	D	0.997	D	0.005	N	0.812	D	1.8	L	-2.68	D	0.706	D	0.728	D	0.542	3.85	19.56	5.04	2.492	3.649	11.270	3.849917	3.849917	0.03	0	0.008852	NA	NA	NA	18.3323334
32	1	211836799	211836799	A	G	exonic	NEK2	NA	nonsynonymous SNV	NEK2:NM_002497:exon8:c.T1307C:p.L436P	exonic	ENSG00000117650	NA	nonsynonymous SNV	ENSG00000117650:ENST00000366999:exon8:c.T1307C:p.L436P,ENSG00000117650:ENST00000540251:exon9:c.T1178C:p.L393P	Score=374;Name=lod=44	NA	1q32.3	NA	NA	NA	NA	rs202099146	0.0005	0.0005	NA	0.000199681	0.001	NA	NA	NA	NA	0.0013	NA	NA	NA	0.00008719	0.0013	0.29	T	1.0	D	0.977	D	0.001	D	1.000	D	1.43	L	-2.4	D	0.438	D	0.742	D	0.867	3.989	20.4	5.46	2.195	7.714	15.834	3.988833	3.988833	0.09	0.000349	0	NA	NA	NA	18.3318972
32	5	76029285	76029285	C	A	exonic	F2R	NA	nonsynonymous SNV	F2R:NM_001992:exon2:c.C1235A:p.S412Y	exonic	ENSG00000181104	NA	nonsynonymous SNV	ENSG00000181104:ENST00000319211:exon2:c.C1235A:p.S412Y	NA	NA	5q13.3	Score=719;Name=V$SEF1_C	NA	NA	NA	rs2227799	0.0005	0.0005	NA	0.00119808	0.003	NA	0.0014	0.0015	NA	NA	NA	NA	0.002	0.0003	0.011	0.04	D	1.0	D	0.972	D	0.342	N	0.872	D	1.995	M	-1.06	T	0.314	D	0.605	D	0.234	3.121	16.43	4.79	2.641	5.039	18.378	3.121071	3.121071	0	0.000233	0.000227	NA	0.007	NA	18.3298004
32	16	16208928	16208928	G	A	exonic	ABCC1	NA	nonsynonymous SNV	ABCC1:NM_004996:exon23:c.G3385A:p.V1129I	exonic	ENSG00000103222	NA	nonsynonymous SNV	ENSG00000103222:ENST00000349029:exon21:c.G3040A:p.V1014I,ENSG00000103222:ENST00000346370:exon22:c.G3217A:p.V1073I,ENSG00000103222:ENST00000351154:exon22:c.G3208A:p.V1070I,ENSG00000103222:ENST00000345148:exon23:c.G3385A:p.V1129I,ENSG00000103222:ENST00000399410:exon23:c.G3385A:p.V1129I,ENSG00000103222:ENST00000399408:exon24:c.G3415A:p.V1139I	Score=497;Name=lod=139	NA	16p13.11	NA	NA	NA	NA	rs74985930	0.0009	0.0009	NA	0.000399361	0.001	NA	NA	NA	0.001	0.0013	0.0017	NA	NA	0.0015	0.0017	0.35	T	1.0	D	0.997	D	0.000	D	1.000	D	0.105	N	-2.67	D	0.355	D	0.686	D	0.473	3.406	17.5	5.18	2.417	7.992	17.686	3.40567	3.40567	0.12	0.001299	0	ID=COSM702670;OCCURENCE=1(lung)	NA	NA	18.3295344
32	7	103969537	103969537	G	T	exonic	LHFPL3	NA	nonsynonymous SNV	LHFPL3:NM_199000:exon1:c.G310T:p.A104S	exonic	ENSG00000187416	NA	nonsynonymous SNV	ENSG00000187416:ENST00000401970:exon1:c.G268T:p.A90S,ENSG00000187416:ENST00000424859:exon1:c.G268T:p.A90S,ENSG00000187416:ENST00000535008:exon1:c.G310T:p.A104S,ENSG00000187416:ENST00000543266:exon1:c.G310T:p.A104S	Score=831;Name=lod=3182	NA	7q22.2	NA	NA	Name=3	NA	rs190167677	0.0014	0.0014	NA	0.000599042	0.002	NA	0.0014	NA	NA	0.0026	NA	0.0028	NA	0.0009	0.0028	0.46	T	0.991	D	0.962	D	0.020	N	1.000	D	2.62	M	-0.69	T	0.125	D	0.629	D	0.562	4.5	24.2	5.06	2.339	9.490	18.455	4.499961	4.499961	0.21	0.000949	0	NA	NA	NA	18.3294844
32	15	44856827	44856827	G	A	exonic	SPG11	NA	nonsynonymous SNV	SPG11:NM_001160227:exon37:c.C6730T:p.L2244F,SPG11:NM_025137:exon39:c.C7069T:p.L2357F	exonic	ENSG00000104133	NA	nonsynonymous SNV	ENSG00000104133:ENST00000535302:exon37:c.C6730T:p.L2244F,ENSG00000104133:ENST00000261866:exon39:c.C7069T:p.L2357F	Score=569;Name=lod=274	NA	15q21.1	Score=768;Name=V$MEF2_01	NA	NA	NA	rs139334167	0.0027	0.0027	0.003	0.00179712	0.004	NA	0.0072	NA	NA	0.004	NA	0.01	NA	0.0013	0.011	0.07	T	0.999	D	0.967	D	0.028	N	1.000	D	2.125	M	-1.12	T	0.215	D	0.560	D	0.452	3.749	19.04	5.26	1.611	1.327	15.147	3.749209	3.749209	0.05	0.00221	0.000682	NA	0.007	NA	18.3258234
32	2	103334983	103334983	G	C	exonic	MFSD9	NA	nonsynonymous SNV	MFSD9:NM_032718:exon6:c.C1321G:p.P441A	exonic	ENSG00000135953	NA	nonsynonymous SNV	ENSG00000135953:ENST00000258436:exon6:c.C1321G:p.P441A	Score=346;Name=lod=34	NA	2q12.1	Score=779;Name=V$PAX5_01	NA	NA	NA	rs34977505	0.02	0.02	0.017	0.0217652	0.001	NA	0.0058	0.0787	NA	NA	NA	0.01	0.07	0.0059	0.07	0.05	D	1.0	D	0.999	D	0.000	D	1.000	D	2.215	M	-1.24	T	-0.444	T	0.119	T	0.212	4.291	22.4	4.6	1.462	9.203	14.575	4.290996	4.290996	0.12	0.001047	0.057195	NA	0.022	NA	18.3253864
33	17	10354727	10354727	T	G	exonic	MYH4	NA	nonsynonymous SNV	MYH4:NM_017533:exon28:c.A3781C:p.S1261R	exonic	ENSG00000264424	NA	nonsynonymous SNV	ENSG00000264424:ENST00000255381:exon28:c.A3781C:p.S1261R	Score=401;Name=lod=57	NA	17p13.1	NA	NA	NA	NA	rs34610503	0.0005	0.0005	0.001	0.00239617	0.002	NA	0.0029	NA	0.0082	NA	NA	0.0028	NA	0.0032	0.0033	0.01	D	0.849	P	0.649	P	0.001	U	0.979	D	2.865	M	-1.65	D	0.444	D	0.646	D	0.629	4.172	21.6	5.62	2.263	2.043	11.245	4.17248	4.17248	NA	0.003256	0.000681	NA	NA	NA	18.3248774
33	12	58018668	58018668	T	G	exonic	SLC26A10	NA	nonsynonymous SNV	SLC26A10:NM_133489:exon10:c.T1247G:p.L416R	exonic	ENSG00000135502	NA	nonsynonymous SNV	ENSG00000135502:ENST00000320442:exon10:c.T1247G:p.L416R,ENSG00000135502:ENST00000379218:exon11:c.T1354G:p.S452A	Score=340;Name=lod=32	NA	12q13.3	NA	NA	NA	NA	rs111924104	0.0032	0.0032	0.001	0.00359425	0.003	NA	0.0058	0.0053	0.0041	0.01	NA	0.01	0.002	0.0054	0.01	0.03	D	0.997	D	0.952	D	.	.	1.000	D	1.735	L	-2.4	D	0.394	D	0.697	D	0.659	2.246	13.47	3.65	2.029	4.422	7.261	2.246357	2.246357	0.02	0.00686	0.004085	NA	NA	NA	18.3180734
34	16	89986091	89986091	G	A	exonic	MC1R	NA	nonsynonymous SNV	MC1R:NM_002386:exon1:c.G425A:p.R142H	exonic	ENSG00000198211,ENSG00000258839	NA	nonsynonymous SNV	ENSG00000258839:ENST00000555147:exon1:c.G425A:p.R142H,ENSG00000198211:ENST00000556922:exon1:c.G425A:p.R142H,ENSG00000258839:ENST00000555427:exon3:c.G425A:p.R142H	Score=538;Name=lod=204	NA	16q24.3	NA	NA	NA	NA	rs11547464	0.0037	0.0037	0.003	0.00279553	0.0089	NA	0.0058	0.0008	NA	0.01	NA	0.01	NA	0.005	0.01	.	.	1.0	D	1.0	D	0.001	U	1.000	D	4.11	H	-4.27	D	0.907	D	0.957	D	0.884	5.507	35	4.81	2.234	6.453	16.852	5.507412	5.507412	0	0.007442	0.000682	NA	NA	NA	18.3119914
35	2	179643775	179643775	C	T	exonic	TTN	NA	nonsynonymous SNV	TTN:NM_003319:exon23:c.G3896A:p.G1299D,TTN:NM_133432:exon23:c.G3896A:p.G1299D,TTN:NM_133437:exon23:c.G3896A:p.G1299D,TTN:NM_001256850:exon24:c.G4034A:p.G1345D,TTN:NM_001267550:exon24:c.G4034A:p.G1345D,TTN:NM_133378:exon24:c.G4034A:p.G1345D,TTN:NM_133379:exon24:c.G4034A:p.G1345D	exonic	ENSG00000155657	NA	nonsynonymous SNV	ENSG00000155657:ENST00000342175:exon23:c.G3896A:p.G1299D,ENSG00000155657:ENST00000359218:exon23:c.G3896A:p.G1299D,ENSG00000155657:ENST00000460472:exon23:c.G3896A:p.G1299D,ENSG00000155657:ENST00000342992:exon24:c.G4034A:p.G1345D,ENSG00000155657:ENST00000360870:exon24:c.G4034A:p.G1345D,ENSG00000155657:ENST00000589042:exon24:c.G4034A:p.G1345D,ENSG00000155657:ENST00000591111:exon24:c.G4034A:p.G1345D	Score=638;Name=lod=524	NA	2q31.2	Score=855;Name=V$ZID_01	NA	NA	NA	rs36021856	0.01	0.01	0.004	0.00379393	0.0159	NA	0.0043	NA	NA	0.02	NA	0.01	NA	0.0099	0.02	0	D	1.0	D	1.0	D	.	.	1.000	D	2.38	M	-0.24	T	-0.120	T	0.356	T	0.783	3.312	17.13	5.72	2.711	7.781	19.895	3.311645	3.311645	0.03	0.007326	0.000681	NA	NA	CLINSIG=probable-non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000040288.1|RCV000126011.1;CLNDSDB=.|.;CLNDSDBID=.|.	18.3002074
35	6	31598523	31598523	C	T	exonic	PRRC2A	NA	nonsynonymous SNV	PRRC2A:NM_004638:exon15:c.C2410T:p.R804C,PRRC2A:NM_080686:exon15:c.C2410T:p.R804C	exonic	ENSG00000204469	NA	nonsynonymous SNV	ENSG00000204469:ENST00000376007:exon15:c.C2410T:p.R804C,ENSG00000204469:ENST00000376033:exon15:c.C2410T:p.R804C	Score=355;Name=lod=37	NA	6p21.33	NA	Name=Pol2-4H8,Pol2(b)	Name=4	NA	rs11538262	0.01	0.01	0	0.00638978	0.0159	0.003	0.0058	0.0015	0.0072	0.01	0.01	0.01	0.002	0.0076	0.011	0	D	1.0	D	0.996	D	0.000	D	1.000	D	0.975	L	3.15	T	-1.105	T	0.026	T	0.253	1.64	11.44	4.2	1.359	1.916	11.851	1.639968	1.639968	0	0.011047	0.00227	NA	0.007	NA	18.2987864
36	19	7708058	7708058	C	T	exonic	STXBP2	NA	nonsynonymous SNV	STXBP2:NM_001127396:exon13:c.C1025T:p.T342M,STXBP2:NM_001272034:exon13:c.C1067T:p.T356M,STXBP2:NM_006949:exon13:c.C1034T:p.T345M	exonic	ENSG00000076944	NA	nonsynonymous SNV	ENSG00000076944:ENST00000221283:exon13:c.C1034T:p.T345M,ENSG00000076944:ENST00000414284:exon13:c.C1025T:p.T342M,ENSG00000076944:ENST00000441779:exon13:c.C1067T:p.T356M	Score=259;Name=lod=15	NA	19p13.2	Score=904;Name=V$AREB6_01	NA	NA	NA	rs117761837	0.01	0.01	0.006	0.00459265	0.0139	NA	0.0072	0.0015	0.002	0.02	NA	0.01	NA	0.0109	0.02	0.02	D	1.0	D	0.992	D	0.000	D	1.000	D	2.045	M	-0.99	T	-0.144	T	0.353	T	0.361	2.642	14.8	4.31	2.513	7.661	12.170	2.642346	2.642346	0.02	0.016163	0.003404	NA	0.007	NA	18.2923704
36	1	63902524	63902524	C	G	exonic	ALG6	NA	nonsynonymous SNV	ALG6:NM_013339:exon15:c.C1357G:p.L453V	exonic	ENSG00000088035	NA	nonsynonymous SNV	ENSG00000088035:ENST00000263440:exon14:c.C1363G:p.L455V,ENSG00000088035:ENST00000371108:exon15:c.C1357G:p.L453V	Score=407;Name=lod=60	NA	1p31.3	NA	NA	NA	NA	rs41285372	0.01	0.01	0.003	0.00419329	0.0159	NA	0.0043	0.0008	0.001	0.01	NA	0.01	0.002	0.0121	0.018	0.12	T	1.0	D	0.998	D	0.000	D	1.000	D	2.25	M	-1.76	D	0.120	D	0.585	D	0.241	3.125	16.45	3.19	0.647	2.010	11.104	3.125406	3.125406	0	0.017674	0.005447	NA	NA	NA	18.2876594
37	2	20130259	20130259	G	A	exonic	WDR35	NA	nonsynonymous SNV	WDR35:NM_020779:exon25:c.C3019T:p.R1007C,WDR35:NM_001006657:exon26:c.C3052T:p.R1018C	exonic	ENSG00000118965	NA	nonsynonymous SNV	ENSG00000118965:ENST00000416055:exon17:c.C1471T:p.R491C,ENSG00000118965:ENST00000281405:exon25:c.C3019T:p.R1007C,ENSG00000118965:ENST00000345530:exon26:c.C3052T:p.R1018C	Score=284;Name=lod=19	NA	2p24.1	NA	NA	NA	NA	rs56395266	0.01	0.01	0.005	0.00519169	0.0209	NA	0.0058	0.0008	NA	0.02	NA	0.01	NA	0.01	0.022	0.01	D	1.0	D	0.931	D	0.000	D	1.000	D	2.445	M	-0.21	T	0.075	D	0.412	T	0.429	2.565	14.54	5.52	2.596	5.619	18.411	2.564551	2.564551	0.01	0.018488	0.004312	NA	0.014	NA	18.2839454
38	2	178545566	178545566	C	T	exonic	PDE11A	NA	nonsynonymous SNV	PDE11A:NM_001077196:exon13:c.G1079A:p.R360H,PDE11A:NM_001077358:exon15:c.G1337A:p.R446H,PDE11A:NM_016953:exon16:c.G2411A:p.R804H,PDE11A:NM_001077197:exon17:c.G1661A:p.R554H	exonic	ENSG00000128655	NA	nonsynonymous SNV	ENSG00000128655:ENST00000389683:exon13:c.G1079A:p.R360H,ENSG00000128655:ENST00000409504:exon15:c.G1337A:p.R446H,ENSG00000128655:ENST00000449286:exon15:c.G1337A:p.R446H,ENSG00000128655:ENST00000286063:exon16:c.G2411A:p.R804H,ENSG00000128655:ENST00000358450:exon17:c.G1661A:p.R554H	Score=606;Name=lod=388	NA	2q31.2	NA	NA	NA	NA	rs75127279	0.01	0.01	0.002	0.0131789	0.0249	0.001	0.0101	NA	0.0337	0.03	NA	0.01	NA	0.0202	0.03	0	D	0.995	D	0.918	D	0.000	D	1.000	D	2.205	M	-1.65	D	-0.582	T	0.198	T	0.506	4.425	23.5	5.77	2.884	4.613	20.347	4.425447	4.425447	0	0.022103	0.004316	NA	0.007	NA	18.2661304
39	4	57248716	57248716	G	C	exonic	AASDH	NA	nonsynonymous SNV	AASDH:NM_181806:exon3:c.C278G:p.P93R	exonic	ENSG00000157426	NA	nonsynonymous SNV	ENSG00000157426:ENST00000205214:exon3:c.C278G:p.P93R,ENSG00000157426:ENST00000451613:exon3:c.C278G:p.P93R,ENSG00000157426:ENST00000502617:exon3:c.C278G:p.P93R,ENSG00000157426:ENST00000514745:exon3:c.C278G:p.P93R	Score=278;Name=lod=18	NA	4q12	Score=855;Name=V$HAND1E47_01	Name=MafK_(ab50322)	NA	NA	rs34228795	0.07	0.07	0.064	0.0646965	0.0179	0.1905	0.0231	0.0129	0.0828	0.02	0.21	0.04	0.02	0.043	0.21	0.02	D	0.995	D	0.962	D	0.000	D	0.000	P	3.24	M	0.8	T	-1.042	T	0.001	T	0.276	2.399	13.98	5.03	1.468	4.194	12.111	2.39934	2.39934	0.07	0.020814	0.013164	NA	0.058	NA	18.2516194
40	13	114088074	114088074	G	A	exonic	ADPRHL1	NA	nonsynonymous SNV	ADPRHL1:NM_138430:exon3:c.C488T:p.T163I,ADPRHL1:NM_199162:exon3:c.C242T:p.T81I	exonic	ENSG00000153531	NA	nonsynonymous SNV	ENSG00000153531:ENST00000356501:exon3:c.C242T:p.T81I,ENSG00000153531:ENST00000375418:exon3:c.C488T:p.T163I,ENSG00000153531:ENST00000413169:exon3:c.C242T:p.T81I	Score=557;Name=lod=244	NA	13q34	Score=952;Name=V$TCF11_01	NA	NA	NA	rs139075628	0.02	0.02	0.012	0.013778	0.0368	NA	0.0144	0.0008	0.0215	0.04	NA	0.02	0.01	0.0358	0.04	0	D	0.998	D	0.913	D	0.000	D	1.000	D	3.005	M	-0.69	T	-0.081	T	0.251	T	0.759	4.832	27.4	4.66	2.167	8.544	17.218	4.83249	4.83249	0.01	0.024796	0.005239	NA	0.007	NA	18.2359374
41	8	32611970	32611970	G	T	exonic	NRG1	NA	nonsynonymous SNV	NRG1:NM_001159996:exon4:c.G319T:p.V107L,NRG1:NM_001160004:exon8:c.G772T:p.V258L,NRG1:NM_001160008:exon8:c.G772T:p.V258L,NRG1:NM_013957:exon8:c.G772T:p.V258L,NRG1:NM_013960:exon8:c.G781T:p.V261L,NRG1:NM_013964:exon8:c.G781T:p.V261L,NRG1:NM_013956:exon9:c.G796T:p.V266L	exonic	ENSG00000157168	NA	nonsynonymous SNV	ENSG00000157168:ENST00000519240:exon4:c.G310T:p.V104L,ENSG00000157168:ENST00000522402:exon4:c.G319T:p.V107L,ENSG00000157168:ENST00000539990:exon4:c.G310T:p.V104L,ENSG00000157168:ENST00000287845:exon7:c.G694T:p.V232L,ENSG00000157168:ENST00000519301:exon7:c.G631T:p.V211L,ENSG00000157168:ENST00000287840:exon8:c.G781T:p.V261L,ENSG00000157168:ENST00000287842:exon8:c.G772T:p.V258L,ENSG00000157168:ENST00000518104:exon8:c.G682T:p.V228L,ENSG00000157168:ENST00000521670:exon8:c.G781T:p.V261L,ENSG00000157168:ENST00000523079:exon8:c.G772T:p.V258L,ENSG00000157168:ENST00000338921:exon9:c.G805T:p.V269L,ENSG00000157168:ENST00000356819:exon9:c.G796T:p.V266L,ENSG00000157168:ENST00000405005:exon9:c.G781T:p.V261L,ENSG00000157168:ENST00000523534:exon9:c.G1000T:p.V334L	Score=604;Name=lod=379	NA	8p12	Score=1000;Name=V$AML1_01	NA	NA	NA	rs74942016	0.02	0.02	0.022	0.014377	0.0467	NA	0.0259	0.0008	0.0061	0.04	NA	0.02	NA	0.029	0.047	0.01	D	0.998	D	0.997	D	0.000	D	1.000	D	2.25	M	2.63	T	-0.560	T	0.114	T	0.72	5.559	35	5.62	2.639	9.869	19.657	5.558867	5.558867	0.01	0.047093	0.010667	NA	0.022	NA	18.2105404
42	16	14029033	14029033	G	A	exonic	ERCC4	NA	nonsynonymous SNV	ERCC4:NM_005236:exon8:c.G1244A:p.R415Q	exonic	ENSG00000175595	NA	nonsynonymous SNV	ENSG00000175595:ENST00000311895:exon8:c.G1244A:p.R415Q	Score=489;Name=lod=129	NA	16p13.12	Score=710;Name=V$P53_01	NA	NA	NA	rs1800067	0.03	0.03	0.026	0.0285543	0.0865	NA	0.0389	0.0038	0.0245	0.07	NA	0.04	0.01	0.0557	0.076	0.01	D	1.0	D	0.98	D	0.000	D	1.000	D	2.44	M	-0.02	T	-0.679	T	0.052	T	0.442	5.806	36	5.77	2.726	9.476	18.989	5.806123	5.806123	0	0.076512	0.012289	NA	0.087	NA	18.1146214
42	X	135956506	135956506	C	G	exonic	RBMX	NA	nonsynonymous SNV	RBMX:NM_002139:exon9:c.G971C:p.R324P	exonic	ENSG00000147274	NA	nonsynonymous SNV	ENSG00000147274:ENST00000565438:exon7:c.G587C:p.R196P,ENSG00000147274:ENST00000570135:exon8:c.G566C:p.R189P,ENSG00000147274:ENST00000320676:exon9:c.G971C:p.R324P	Score=861;Name=lod=4226	NA	Xq26.3	Score=807;Name=V$PAX3_01	Name=Pol2-4H8	NA	NA	rs77794331	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.228	0.022	0.06	T	0.996	D	0.969	D	0.000	U	1.000	D	1.845	L	-1.18	T	0.185	D	0.586	D	0.86	3.288	17.04	5.4	2.380	7.717	18.431	3.287583	3.287583	0.05	NA	NA	NA	0.022	NA	18.1053334
43	12	64173807	64173807	G	A	exonic	TMEM5	NA	nonsynonymous SNV	TMEM5:NM_014254:exon1:c.G67A:p.A23T	exonic	ENSG00000118600	NA	nonsynonymous SNV	ENSG00000118600:ENST00000261234:exon1:c.G67A:p.A23T,ENSG00000118600:ENST00000543342:exon1:c.G67A:p.A23T	Score=462;Name=lod=101	NA	12q14.2	NA	Name=HMGN3,GABP,TAF1,YY1_(C-20),Pol2,ELF1_(SC-631),STAT1,Pol2(b),HA-E2F1,YY1,Egr-1,NFKB,c-Myc,CCNT2,IRF1,TBP	Name=146	NA	rs61935924	0.06	0.06	0.063	0.0523163	0.1044	0.0129	0.0562	0.0166	0.0849	0.1	0.01	0.07	0.02	0.0898	0.1	.	.	1.0	D	0.997	D	0.000	D	1.000	D	1.555	L	1.47	T	-1.203	T	0.004	T	0.158	4.54	24.5	2.5	1.009	4.363	6.754	4.540086	4.540086	0.15	0.105	0.02837	NA	NA	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118638.1;CLNDSDB=.;CLNDSDBID=.	18.0341334
44	6	123122464	123122464	C	T	exonic	SMPDL3A	NA	nonsynonymous SNV	SMPDL3A:NM_006714:exon4:c.C481T:p.P161S	exonic	ENSG00000172594	NA	nonsynonymous SNV	ENSG00000172594:ENST00000539041:exon3:c.C88T:p.P30S,ENSG00000172594:ENST00000368440:exon4:c.C481T:p.P161S	Score=414;Name=lod=64	NA	6q22.31	NA	NA	Name=13	NA	rs28385609	0.08	0.08	0.076	0.100639	0.1372	0.0248	0.0749	0.0507	0.227	0.15	0.02	0.07	0.05	0.1349	0.15	0.2	T	1.0	D	1.0	D	0.000	D	0.000	P	1.685	L	-1.84	D	0.187	D	0.676	D	0.494	3.255	16.92	5.72	2.857	6.514	20.241	3.255243	3.255243	0	0.145698	0.046074	NA	0.08	NA	17.9155354
45	2	211060050	211060050	T	G	exonic	ACADL	NA	nonsynonymous SNV	ACADL:NM_001608:exon9:c.A997C:p.K333Q	exonic	ENSG00000115361	NA	nonsynonymous SNV	ENSG00000115361:ENST00000233710:exon9:c.A997C:p.K333Q	Score=519;Name=lod=171	Name=Metabolite levels	2q34	Score=793;Name=V$OCT1_01	NA	Name=28	NA	rs2286963	0.23	0.23	0.228	0.211062	0.3131	0.1865	0.2248	0.0893	0.2863	0.32	0.18	0.28	0.11	0.3011	0.34	0.26	T	0.978	D	0.841	P	0.000	D	0.000	P	1.785	L	-3.95	D	-1.577	T	0.000	T	0.584	3.576	18.22	5.77	2.213	6.842	16.148	3.576473	3.576473	0.1	0.341395	0.150023	NA	0.261	CLINSIG=unknown;CLNDBN=not_provided;CLNREVSTAT=single;CLNACC=RCV000115027.1;CLNDSDB=.;CLNDSDBID=.	17.8777384
46	22	24579157	24579157	G	T	exonic	SUSD2	NA	nonsynonymous SNV	SUSD2:NM_019601:exon2:c.G209T:p.G70V	exonic	ENSG00000099994	NA	nonsynonymous SNV	ENSG00000099994:ENST00000358321:exon2:c.G209T:p.G70V	Score=393;Name=lod=53	NA	22q11.23	NA	NA	NA	NA	rs79232038	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4683	NA	0.31	T	1.0	D	0.999	D	0.000	D	1.000	D	2.33	M	-1.28	T	0.119	D	0.617	D	0.947	3.942	20.2	3.33	2.208	3.237	13.123	3.942095	3.942095	0	NA	NA	ID=COSM1180264;OCCURENCE=1(prostate)	NA	NA	17.8650334
47	17	21204192	21204192	C	T	exonic	MAP2K3	NA	nonsynonymous SNV	MAP2K3:NM_002756:exon5:c.C199T:p.R67W,MAP2K3:NM_145109:exon5:c.C286T:p.R96W	exonic	ENSG00000034152	NA	nonsynonymous SNV	ENSG00000034152:ENST00000342679:exon5:c.C286T:p.R96W,ENSG00000034152:ENST00000361818:exon5:c.C199T:p.R67W,ENSG00000034152:ENST00000496046:exon5:c.C286T:p.R96W,ENSG00000034152:ENST00000526076:exon5:c.C199T:p.R67W,ENSG00000034152:ENST00000316920:exon6:c.C199T:p.R67W	Score=461;Name=lod=100	NA	17p11.2	Score=801;Name=V$ER_Q6	NA	NA	NA	rs56216806	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.4998	0.5	0.01	D	1.0	D	0.994	D	0.000	D	1.000	D	2.375	M	-0.23	T	-0.944	T	0.000	T	0.939	2.698	14.98	5.08	2.359	2.458	13.451	2.698443	2.698443	0	NA	NA	NA	0.5	NA	17.8335334
47	11	48347067	48347067	C	T	exonic	OR4C3	NA	nonsynonymous SNV	OR4C3:NM_001004702:exon1:c.C575T:p.P192L	exonic	ENSG00000176547	NA	nonsynonymous SNV	ENSG00000176547:ENST00000319856:exon1:c.C575T:p.P192L	Score=381;Name=lod=47	NA	11p11.2	Score=743;Name=V$SRF_01	NA	NA	NA	rs73464001	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	0	D	1.0	D	0.998	D	0.000	D	0.997	D	2.51	M	8.65	T	-0.533	T	0.000	T	0.764	3.68	18.7	5.78	2.782	2.481	17.680	3.679921	3.679921	0.01	NA	NA	NA	0.377	NA	17.8333334
47	14	75416073	75416073	T	C	exonic	PGF	NA	nonsynonymous SNV	PGF:NM_001207012:exon3:c.A302G:p.N101S,PGF:NM_002632:exon3:c.A302G:p.N101S	exonic	ENSG00000119630	NA	nonsynonymous SNV	ENSG00000119630:ENST00000238607:exon3:c.A299G:p.N100S,ENSG00000119630:ENST00000405431:exon3:c.A302G:p.N101S,ENSG00000119630:ENST00000553716:exon3:c.A302G:p.N101S,ENSG00000119630:ENST00000555567:exon3:c.A302G:p.N101S	Score=483;Name=lod=123	NA	14q24.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00001789	NA	0	D	0.999	D	0.888	P	0.000	D	0.976	D	1.965	M	.	.	-0.440	T	0.292	T	0.257	3.616	18.4	4.16	1.753	4.210	10.189	3.615925	3.615925	0	NA	NA	NA	NA	NA	17.8333155
47	9	109692959	109692959	G	C	exonic	ZNF462	NA	nonsynonymous SNV	ZNF462:NM_021224:exon4:c.G6001C:p.A2001P	exonic	ENSG00000148143	NA	nonsynonymous SNV	ENSG00000148143:ENST00000374686:exon2:c.G2650C:p.A884P,ENSG00000148143:ENST00000441147:exon2:c.G2536C:p.A846P,ENSG00000148143:ENST00000277225:exon4:c.G6001C:p.A2001P,ENSG00000148143:ENST00000457913:exon4:c.G6001C:p.A2001P	Score=419;Name=lod=67	NA	9q31.2	Score=758;Name=V$HEN1_02	NA	Name=7	NA	NA	NA	NA	NA	0.000199681	0.001	NA	NA	NA	NA	NA	NA	NA	NA	0.00002474	NA	0.1	T	0.991	D	0.766	P	0.000	D	1.000	D	0.55	N	3.9	T	-1.035	T	0.024	T	0.8	3.262	16.95	5.09	2.359	2.745	13.474	3.262111	3.262111	0.01	NA	NA	NA	NA	NA	17.8323087
47	5	39311336	39311336	A	T	exonic	C9	NA	nonsynonymous SNV	C9:NM_001737:exon7:c.T1014A:p.F338L	exonic	ENSG00000113600	NA	nonsynonymous SNV	ENSG00000113600:ENST00000263408:exon7:c.T1014A:p.F338L	Score=533;Name=lod=195	NA	5p13.1	Score=741;Name=V$MEF2_04	NA	NA	NA	rs141600725	0.0005	0.0005	NA	0.000399361	NA	NA	0.0014	NA	0.001	NA	NA	0.0028	NA	0.0008	0.0028	0.48	T	0.957	D	0.67	P	0.000	D	0.981	D	1.75	L	-2.07	D	-0.125	T	0.536	D	0.679	4.201	21.8	4.31	2.082	1.646	9.879	4.201417	4.201417	0.04	0.002093	0.000681	NA	NA	NA	17.8304404
48	11	16824599	16824599	C	T	exonic	PLEKHA7	NA	nonsynonymous SNV	PLEKHA7:NM_175058:exon15:c.G2077A:p.V693I	exonic	ENSG00000166689	NA	nonsynonymous SNV	ENSG00000166689:ENST00000525581:exon3:c.G70A:p.V24I,ENSG00000166689:ENST00000355661:exon15:c.G2077A:p.V693I,ENSG00000166689:ENST00000448080:exon15:c.G2077A:p.V693I,ENSG00000166689:ENST00000531066:exon15:c.G2077A:p.V693I	Score=595;Name=lod=349	NA	11p15.1	Score=795;Name=V$ER_Q6	NA	NA	NA	rs34556458	0.01	0.01	0.005	0.0061901	0.0119	NA	0.0202	0.0008	0.0041	0.01	NA	0.03	0.002	0.0068	0.03	0.04	D	0.995	D	0.867	P	0.000	D	1.000	D	2.215	M	1.41	T	-0.980	T	0.075	T	0.497	5.112	32	5.84	2.768	7.272	19.738	5.112012	5.112012	0.18	0.007802	0.001591	NA	NA	NA	17.8068314
49	10	95093619	95093619	G	A	exonic	MYOF	NA	nonsynonymous SNV	MYOF:NM_133337:exon41:c.C4576T:p.P1526S,MYOF:NM_013451:exon42:c.C4615T:p.P1539S	exonic	ENSG00000138119	NA	nonsynonymous SNV	ENSG00000138119:ENST00000358334:exon41:c.C4576T:p.P1526S,ENSG00000138119:ENST00000359263:exon42:c.C4615T:p.P1539S,ENSG00000138119:ENST00000371501:exon42:c.C4615T:p.P1539S,ENSG00000138119:ENST00000371502:exon43:c.C4672T:p.P1558S	Score=543;Name=lod=214	NA	10q23.33	Score=760;Name=V$LUN1_01	Name=STAT3,JunD	Name=23	NA	rs61861290	0.01	0.01	0.006	0.0061901	0.0189	NA	0.0144	0.0008	0.001	0.02	NA	0.02	0.002	0.0109	0.02	0.12	T	0.973	D	0.749	P	0.000	D	1.000	D	1.67	L	1.1	T	-0.954	T	0.103	T	0.339	4.797	27.1	5.23	2.721	9.263	18.999	4.797467	4.797467	0.02	0.016845	0.003406	NA	0.007	NA	17.7866884
50	1	150940625	150940625	T	G	exonic	CERS2	NA	nonsynonymous SNV	CERS2:NM_022075:exon4:c.A344C:p.E115A,CERS2:NM_181746:exon4:c.A344C:p.E115A	exonic	ENSG00000143418	NA	nonsynonymous SNV	ENSG00000143418:ENST00000558062:exon3:c.A344C:p.E115A,ENSG00000143418:ENST00000561294:exon3:c.A317C:p.E106A,ENSG00000143418:ENST00000271688:exon4:c.A344C:p.E115A,ENSG00000143418:ENST00000361419:exon4:c.A344C:p.E115A,ENSG00000143418:ENST00000368949:exon4:c.A344C:p.E115A,ENSG00000143418:ENST00000368954:exon4:c.A344C:p.E115A,ENSG00000143418:ENST00000421609:exon4:c.A344C:p.E115A,ENSG00000143418:ENST00000457392:exon4:c.A344C:p.E115A	Score=636;Name=lod=511	Name=Rhegmatogenous retinal detachment	1q21.3	NA	NA	NA	NA	rs267738	0.1	0.1	0.074	0.0680911	0.1909	0.0258	0.0951	0.0061	0.0501	0.2	0.03	0.11	0.01	0.1469	0.21	0.28	T	0.863	P	0.756	P	0.000	D	0.000	P	2.565	M	-3.89	D	0.822	D	0.867	D	0.322	5.158	32	4.9	2.058	7.460	14.374	5.158232	5.158232	0.01	0.211744	0.039946	ID=COSM1333906;OCCURENCE=1(large_intestine)	0.058	NA	17.7837894
51	8	145006992	145006992	C	T	exonic	PLEC	NA	nonsynonymous SNV	PLEC:NM_201378:exon14:c.G1664A:p.R555Q,PLEC:NM_201379:exon14:c.G1640A:p.R547Q,PLEC:NM_201380:exon14:c.G2117A:p.R706Q,PLEC:NM_201381:exon14:c.G1610A:p.R537Q,PLEC:NM_201382:exon14:c.G1706A:p.R569Q,PLEC:NM_201383:exon14:c.G1718A:p.R573Q,PLEC:NM_201384:exon14:c.G1706A:p.R569Q,PLEC:NM_000445:exon15:c.G1787A:p.R596Q	exonic	ENSG00000178209	NA	nonsynonymous SNV	ENSG00000178209:ENST00000322810:exon14:c.G2117A:p.R706Q,ENSG00000178209:ENST00000345136:exon14:c.G1706A:p.R569Q,ENSG00000178209:ENST00000354589:exon14:c.G1706A:p.R569Q,ENSG00000178209:ENST00000354958:exon14:c.G1640A:p.R547Q,ENSG00000178209:ENST00000356346:exon14:c.G1664A:p.R555Q,ENSG00000178209:ENST00000357649:exon14:c.G1718A:p.R573Q,ENSG00000178209:ENST00000398774:exon14:c.G1610A:p.R537Q,ENSG00000178209:ENST00000527096:exon14:c.G1775A:p.R592Q,ENSG00000178209:ENST00000436759:exon15:c.G1787A:p.R596Q,ENSG00000178209:ENST00000528025:exon16:c.G1838A:p.R613Q	Score=587;Name=lod=325	NA	8q24.3	NA	NA	NA	NA	rs3135103	0.01	0.01	0.008	0.00658946	0.0258	0.001	0.0058	NA	0.002	0.02	0.0017	0.01	NA	0.015	0.02	0.12	T	0.993	D	0.494	P	0.029	U	1.000	D	1.01	L	-3.06	D	0.174	D	0.506	D	0.346	3.252	16.91	5.12	2.390	4.329	17.322	3.252136	3.252136	0.06	0.019533	0.005024	NA	0.007	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117956.2;CLNDSDB=.;CLNDSDBID=.	17.7730004
52	15	79083120	79083120	G	A	exonic	ADAMTS7	NA	nonsynonymous SNV	ADAMTS7:NM_014272:exon6:c.C920T:p.T307M	exonic	ENSG00000136378	NA	nonsynonymous SNV	ENSG00000136378:ENST00000388820:exon6:c.C920T:p.T307M	Score=467;Name=lod=105	NA	15q25.1	Score=733;Name=V$PAX4_04	NA	NA	NA	rs2127898	0.25	0.25	0.257	NA	NA	NA	NA	NA	NA	0.23	0.28	0.3	0.21	0.3215	0.3	0.01	D	1.0	D	0.98	D	0.000	D	0.031	P	2.645	M	-2.36	D	-1.272	T	0.000	T	0.1	3.084	16.3	2.85	1.060	4.633	7.958	3.084407	3.084407	0	0.261822	0.286885	NA	0.261	NA	17.7500114
53	19	54662043	54662043	C	T	exonic	LENG1	NA	nonsynonymous SNV	LENG1:NM_024316:exon2:c.G289A:p.E97K	exonic	ENSG00000105617	NA	nonsynonymous SNV	ENSG00000105617:ENST00000222224:exon2:c.G289A:p.E97K	Score=440;Name=lod=82	NA	19q13.42	Score=780;Name=V$MEF2_02	NA	NA	NA	rs35089861	0.03	0.03	0.021	0.0173722	0.0616	0.001	0.0245	0.0023	0.0041	0.06	NA	0.02	NA	0.0379	0.06	0.04	D	0.975	D	0.632	P	0.000	D	1.000	D	3.405	M	0.57	T	-0.548	T	0.063	T	0.308	5.073	31	5.14	2.578	3.341	17.825	5.072531	5.072531	0	0.05407	0.006809	NA	0.029	NA	17.6797634
53	9	15459821	15459821	A	C	exonic	SNAPC3	NA	nonsynonymous SNV	SNAPC3:NM_001039697:exon9:c.A1193C:p.E398A	exonic	ENSG00000164975	NA	nonsynonymous SNV	ENSG00000164975:ENST00000380821:exon9:c.A1193C:p.E398A,ENSG00000164975:ENST00000467062:exon9:c.A1193C:p.E398A,ENSG00000164975:ENST00000490969:exon9:c.A1193C:p.E398A	Score=689;Name=lod=840	NA	9p22.3	Score=965;Name=V$CREL_01	NA	NA	NA	rs3087653	0.04	0.04	0.037	0.0385383	0.0596	NA	0.0231	0.0416	0.0634	0.05	NA	0.03	0.05	0.0451	0.076	0.05	D	0.98	D	0.721	P	0.000	D	1.000	D	2.005	M	0.93	T	-0.994	T	0.042	T	0.347	5.082	31	5.86	2.367	7.283	16.560	5.081553	5.081553	0.05	0.049419	0.03291	NA	0.051	NA	17.6792144
54	11	89017961	89017961	G	A	exonic	TYR	NA	nonsynonymous SNV	TYR:NM_000372:exon4:c.G1205A:p.R402Q	exonic	ENSG00000077498	NA	nonsynonymous SNV	ENSG00000077498:ENST00000263321:exon4:c.G1205A:p.R402Q	Score=505;Name=lod=150	Name=Tanning,Sunburns	11q14.3	NA	NA	NA	NA	rs1126809	0.11	0.11	0.099	0.08127	0.2525	0.001	0.1254	0.0091	0.0542	0.25	NA	0.15	0.01	0.177	0.28	.	.	0.999	D	0.994	D	0.000	D	0.000	P	2.025	M	-4.81	D	-1.761	T	0.001	T	0.836	5.014	29.5	4.68	2.166	7.499	17.625	5.013726	5.013726	0.02	0.281228	0.050659	NA	0.188	CLINSIG=other|pathogenic|other|other|other|pathogenic|untested;CLNDBN=Oculocutaneous_albinism_type_1B|Oca1-ts|Cutaneous_malignant_melanoma_8|Skin/hair/eye_pigmentation\x2c_variation_in\x2c_3|Skin/hair/eye_pigmentation_3\x2c_blue/green_eyes|WAARDENBURG_SYNDROME_2_AND_OCULAR_ALBINISM\x2c_DIGENIC|not_provided;CLNREVSTAT=mult|single|single|single|single|single|not;CLNACC=RCV000003978.5|RCV000003979.3|RCV000003980.3|RCV000003981.4|RCV000003982.4|RCV000023596.3|RCV000085910.1;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet:Orphanet:Orphanet|.|MedGen:OMIM:Orphanet|MedGen:OMIM|.|.|.;CLNDSDBID=NBK1166:C1847024:606952:ORPHA352731:ORPHA352737:ORPHA79434|.|C3152204:614456:ORPHA293822|C2677190:601800|.|.|.	17.6226054
55	8	101719121	101719121	G	A	exonic	PABPC1	NA	nonsynonymous SNV	PABPC1:NM_002568:exon10:c.C1441T:p.R481C	exonic	ENSG00000070756	NA	nonsynonymous SNV	ENSG00000070756:ENST00000522658:exon1:c.C82T:p.R28C,ENSG00000070756:ENST00000318607:exon10:c.C1441T:p.R481C,ENSG00000070756:ENST00000519004:exon11:c.C1306T:p.R436C,ENSG00000070756:ENST00000522387:exon11:c.C1345T:p.R449C	Score=494;Name=lod=136	NA	8q22.3	Score=833;Name=V$FREAC4_01	NA	Name=2	NA	rs79986761	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2769	NA	0.03	D	0.87	P	0.368	B	0.000	D	1.000	D	2.345	M	2.54	T	-0.696	T	0.189	T	0.929	3.493	17.86	5.63	2.816	8.991	20.034	3.492858	3.492858	0	NA	NA	NA	NA	NA	17.5564334
56	10	73558952	73558952	C	T	exonic	CDH23	NA	nonsynonymous SNV	CDH23:NM_001171933:exon4:c.C419T:p.P140L,CDH23:NM_001171934:exon4:c.C419T:p.P140L,CDH23:NM_022124:exon49:c.C7139T:p.P2380L	exonic	ENSG00000107736	NA	nonsynonymous SNV	ENSG00000107736:ENST00000398788:exon4:c.C419T:p.P140L,ENSG00000107736:ENST00000224721:exon50:c.C7154T:p.P2385L	Score=387;Name=lod=50	NA	10q22.1	Score=990;Name=V$MZF1_01	NA	NA	NA	rs4747195	0.34	0.34	0.294	0.328275	0.2744	0.5298	0.3473	0.2443	0.2761	0.27	0.52	0.3	0.27	0.2997	0.52	0.03	D	1.0	D	0.981	D	0.000	D	0.000	P	2.605	M	5.69	T	-0.845	T	0.000	T	0.331	4.305	22.5	5.55	2.623	7.786	19.516	4.304758	4.304758	0	0.261241	0.24006	ID=COSM146955;OCCURENCE=1(stomach)	0.326	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000039264.1|RCV000124204.1;CLNDSDB=.|.;CLNDSDBID=.|.	17.4979924
57	2	152476028	152476028	C	G	exonic	NEB	NA	nonsynonymous SNV	NEB:NM_004543:exon69:c.G10044C:p.W3348C,NEB:NM_001164507:exon73:c.G10809C:p.W3603C,NEB:NM_001164508:exon73:c.G10809C:p.W3603C,NEB:NM_001271208:exon73:c.G10809C:p.W3603C	exonic	ENSG00000183091	NA	nonsynonymous SNV	ENSG00000183091:ENST00000172853:exon69:c.G10080C:p.W3360C,ENSG00000183091:ENST00000409198:exon70:c.G10080C:p.W3360C,ENSG00000183091:ENST00000603639:exon71:c.G10809C:p.W3603C,ENSG00000183091:ENST00000604864:exon71:c.G10809C:p.W3603C,ENSG00000183091:ENST00000397345:exon73:c.G10809C:p.W3603C,ENSG00000183091:ENST00000427231:exon73:c.G10809C:p.W3603C	Score=457;Name=lod=96	NA	2q23.3	NA	Name=CTCF,JunD,c-Jun,HA-E2F1,eGFP-JunD,GATA-2,c-Fos,NRSF	Name=67	NA	rs10172023	0.25	0.25	0.233	0.219848	0.3062	0.244	0.2478	0.1316	0.2055	0.32	0.25	0.23	0.14	0.2891	0.33	0.07	T	1.0	D	0.995	D	0.000	D	0.000	P	2.885	M	1.46	T	-1.099	T	0.000	T	0.788	2.387	13.94	5.61	2.793	1.494	16.270	2.387416	2.387416	0.03	0.331429	0.138985	NA	0.167	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000081108.3;CLNDSDB=.;CLNDSDBID=.	17.4066044
58	7	27856536	27856536	A	G	exonic	TAX1BP1	NA	nonsynonymous SNV	TAX1BP1:NM_001206902:exon14:c.A1367G:p.D456G,TAX1BP1:NM_001079864:exon15:c.A1838G:p.D613G,TAX1BP1:NM_001206901:exon15:c.A1838G:p.D613G,TAX1BP1:NM_006024:exon15:c.A1964G:p.D655G	exonic	ENSG00000106052	NA	nonsynonymous SNV	ENSG00000106052:ENST00000457186:exon7:c.A575G:p.D192G,ENSG00000106052:ENST00000433216:exon14:c.A1367G:p.D456G,ENSG00000106052:ENST00000265393:exon15:c.A1838G:p.D613G,ENSG00000106052:ENST00000396319:exon15:c.A1964G:p.D655G,ENSG00000106052:ENST00000543117:exon15:c.A1838G:p.D613G,ENSG00000106052:ENST00000409980:exon16:c.A2036G:p.D679G	Score=573;Name=lod=283	NA	7p15.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.08	T	0.999	D	0.985	D	0.000	D	1.000	D	2.085	M	2.55	T	-0.649	T	0.246	T	0.811	4.056	20.8	5.67	2.178	7.141	15.915	4.055665	4.055665	0	NA	NA	NA	NA	NA	17.3333334
58	16	72055110	72055110	G	C	exonic	DHODH	NA	nonsynonymous SNV	DHODH:NM_001361:exon5:c.G605C:p.G202A	exonic	ENSG00000102967	NA	nonsynonymous SNV	ENSG00000102967:ENST00000219240:exon5:c.G605C:p.G202A,ENSG00000102967:ENST00000572887:exon5:c.G605C:p.G202A	Score=449;Name=lod=89	NA	16q22.2	NA	Name=CTCF,Rad21,GABP	Name=4	NA	rs267606767	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.46	T	0.158	B	0.12	B	0.000	D	1.000	D	0.255	N	-2.08	D	-0.390	T	0.436	T	0.951	2.111	13.01	5.23	2.596	9.697	19.193	2.110802	2.110802	0.16	NA	NA	NA	NA	CLINSIG=pathogenic;CLNDBN=Miller_syndrome,Miller_syndrome;CLNREVSTAT=single,single;CLNACC=RCV000018296.26,RCV000018295.26;CLNDSDB=MedGen:OMIM:Orphanet:SNOMED_CT,MedGen:OMIM:Orphanet:SNOMED_CT;CLNDSDBID=C0265257:263750:ORPHA246:66038001,C0265257:263750:ORPHA246:66038001	17.3333334
58	2	73746975	73746975	A	G	exonic	ALMS1	NA	nonsynonymous SNV	ALMS1:NM_015120:exon11:c.A9610G:p.T3204A	exonic	ENSG00000116127	NA	nonsynonymous SNV	ENSG00000116127:ENST00000409009:exon10:c.A9484G:p.T3162A,ENSG00000116127:ENST00000264448:exon11:c.A9610G:p.T3204A	Score=459;Name=lod=98	NA	2p13.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000008286	NA	0.01	D	0.999	D	0.996	D	0.000	D	1.000	D	1.525	L	2.69	T	-1.141	T	0.075	T	0.775	4.154	21.5	5.62	2.277	4.868	12.513	4.153814	4.153814	0	NA	NA	NA	NA	NA	17.3333251
58	11	73809278	73809278	G	C	exonic	C2CD3	NA	nonsynonymous SNV	C2CD3:NM_015531:exon16:c.C2755G:p.L919V	exonic	ENSG00000168014	NA	nonsynonymous SNV	ENSG00000168014:ENST00000313663:exon16:c.C2755G:p.L919V,ENSG00000168014:ENST00000334126:exon16:c.C2755G:p.L919V	Score=652;Name=lod=593	NA	11q13.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000008256	NA	0.13	T	0.998	D	0.996	D	0.000	D	1.000	D	2.26	M	0.23	T	-0.331	T	0.408	T	0.756	4.852	27.7	5.62	2.794	5.570	19.625	4.852433	4.852433	0	NA	NA	NA	NA	NA	17.3333251
58	3	100605051	100605051	C	A	exonic	ABI3BP	NA	nonsynonymous SNV	ABI3BP:NM_015429:exon5:c.G599T:p.G200V	exonic	ENSG00000154175	NA	nonsynonymous SNV	ENSG00000154175:ENST00000527258:exon4:c.G356T:p.G119V,ENSG00000154175:ENST00000530539:exon4:c.G419T:p.G140V,ENSG00000154175:ENST00000284322:exon5:c.G599T:p.G200V,ENSG00000154175:ENST00000471714:exon5:c.G599T:p.G200V,ENSG00000154175:ENST00000495063:exon5:c.G599T:p.G200V	Score=502;Name=lod=146	NA	3q12.2	NA	NA	NA	NA	rs199740093	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00001666	NA	0.01	D	1.0	D	1.0	D	0.000	D	1.000	D	1.905	M	1.14	T	-0.713	T	0.230	T	0.97	4.713	26.2	5.71	2.695	6.753	19.853	4.713332	4.713332	0	NA	NA	NA	NA	NA	17.3333167
58	14	45400737	45400737	G	A	exonic	KLHL28	NA	nonsynonymous SNV	KLHL28:NM_017658:exon4:c.C1351T:p.R451C	exonic	ENSG00000179454	NA	nonsynonymous SNV	ENSG00000179454:ENST00000355081:exon4:c.C1393T:p.R465C,ENSG00000179454:ENST00000396128:exon4:c.C1351T:p.R451C	Score=733;Name=lod=1274	NA	14q21.2	Score=834;Name=V$PAX3_01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00001687	NA	0.18	T	1.0	D	0.999	D	0.000	D	1.000	D	0.33	N	-1.33	T	-0.016	T	0.489	T	0.954	2.337	13.77	4.72	2.321	5.164	17.631	2.33746	2.33746	0.19	NA	NA	NA	NA	NA	17.3333165
58	17	33457364	33457364	C	T	exonic	FNDC8	NA	nonsynonymous SNV	FNDC8:NM_017559:exon4:c.C886T:p.R296W	exonic	ENSG00000073598	NA	nonsynonymous SNV	ENSG00000073598:ENST00000158009:exon4:c.C886T:p.R296W	Score=426;Name=lod=72	NA	17q12	Score=694;Name=V$PPARG_02	Name=Pol2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00002472	NA	0	D	0.993	D	0.353	B	0.111	N	1.000	D	0.345	N	1.38	T	-1.087	T	0.053	T	0.28	2.499	14.32	3.92	1.399	2.161	10.565	2.498818	2.498818	NA	NA	NA	NA	NA	NA	17.3333087
58	19	13869786	13869786	G	A	exonic	CCDC130	NA	nonsynonymous SNV	CCDC130:NM_030818:exon7:c.G362A:p.R121H	exonic	ENSG00000104957	NA	nonsynonymous SNV	ENSG00000104957:ENST00000589096:exon1:c.G65A:p.R22H,ENSG00000104957:ENST00000586666:exon6:c.G215A:p.R72H,ENSG00000104957:ENST00000221554:exon7:c.G362A:p.R121H,ENSG00000104957:ENST00000586600:exon8:c.G362A:p.R121H	Score=529;Name=lod=188	NA	19p13.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0000254	NA	0.12	T	1.0	D	0.996	D	0.000	D	1.000	D	2.295	M	1.46	T	-0.822	T	0.194	T	0.761	5.029	29.7	5.06	2.645	8.591	15.954	5.028667	5.028667	0	NA	NA	ID=COSM991728;OCCURENCE=1(endometrium)	NA	NA	17.333308
58	1	26161677	26161677	C	T	exonic	AUNIP	NA	nonsynonymous SNV	AUNIP:NM_024037:exon3:c.G881A:p.G294D	exonic	ENSG00000127423	NA	nonsynonymous SNV	ENSG00000127423:ENST00000374298:exon3:c.G881A:p.G294D,ENSG00000127423:ENST00000538789:exon3:c.G881A:p.G294D	Score=494;Name=lod=136	NA	1p36.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00004123	NA	0	D	1.0	D	1.0	D	0.000	D	0.997	D	1.1	L	-0.43	T	-0.311	T	0.372	T	0.853	4.158	21.5	5.39	2.826	3.943	14.588	4.158297	4.158297	NA	NA	NA	NA	NA	NA	17.3332922
58	5	172341813	172341813	G	A	exonic	ERGIC1	NA	nonsynonymous SNV	ERGIC1:NM_001031711:exon5:c.G347A:p.R116H	exonic	ENSG00000113719	NA	nonsynonymous SNV	ENSG00000113719:ENST00000326654:exon3:c.G212A:p.R71H,ENSG00000113719:ENST00000518247:exon3:c.G212A:p.R71H,ENSG00000113719:ENST00000393784:exon5:c.G347A:p.R116H,ENSG00000113719:ENST00000520326:exon5:c.G347A:p.R116H,ENSG00000113719:ENST00000523291:exon5:c.G347A:p.R116H	Score=567;Name=lod=269	NA	5q35.1	NA	NA	NA	NA	rs369010301	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000008286	0.0001	0.02	D	1.0	D	0.999	D	0.000	D	1.000	D	2.375	M	.	.	-0.042	T	0.465	T	0.942	5.204	33	5.37	2.505	9.356	18.749	5.204417	5.204417	0.01	0.000116	0	NA	NA	NA	17.3332091
58	11	88911696	88911696	C	A	exonic	TYR	NA	nonsynonymous SNV	TYR:NM_000372:exon1:c.C575A:p.S192Y	exonic	ENSG00000077498	NA	nonsynonymous SNV	ENSG00000077498:ENST00000263321:exon1:c.C575A:p.S192Y	NA	Name=Skin pigmentation,Freckles	11q14.3	Score=929;Name=V$ZIC3_01	NA	NA	NA	rs1042602	0.18	0.18	0.171	0.123403	0.3718	0.001	0.2378	0.0121	0.0634	0.37	0.0017	0.31	0.01	0.2518	0.38	.	.	0.997	D	0.974	D	0.000	D	1.000	P	2.135	M	-5.1	D	-1.784	T	0.000	T	0.455	3.276	17	6.07	2.885	4.436	15.385	3.27596	3.27596	0.07	0.376716	0.075647	ID=COSM430000;OCCURENCE=1(breast)	0.232	CLINSIG=other|non-pathogenic|untested;CLNDBN=Skin/hair/eye_pigmentation\x2c_variation_in\x2c_3|Oculocutaneous_albinism_type_1A|not_provided;CLNREVSTAT=single|single|not;CLNACC=RCV000003977.4|RCV000055807.1|RCV000085955.1;CLNDSDB=MedGen:OMIM|GeneReviews:MedGen:OMIM:Orphanet:Orphanet:SNOMED_CT|.;CLNDSDBID=C2677190:601800|NBK1166:C0268494:203100:ORPHA352731:ORPHA79431:6483008|.	17.3330174
58	1	161681057	161681057	C	T	exonic	FCRLA	NA	nonsynonymous SNV	FCRLA:NM_032738:exon3:c.C343T:p.R115C,FCRLA:NM_001184866:exon4:c.C361T:p.R121C	exonic	ENSG00000132185	NA	nonsynonymous SNV	ENSG00000132185:ENST00000236938:exon3:c.C343T:p.R115C,ENSG00000132185:ENST00000349527:exon3:c.C292T:p.R98C,ENSG00000132185:ENST00000367953:exon4:c.C310T:p.R104C,ENSG00000132185:ENST00000367959:exon4:c.C361T:p.R121C,ENSG00000132185:ENST00000540926:exon4:c.C310T:p.R104C	Score=295;Name=lod=21	NA	1q23.3	Score=798;Name=V$PAX5_02	NA	NA	NA	rs147592382	NA	NA	NA	0.000199681	NA	NA	0.0014	NA	NA	NA	NA	NA	NA	0.00009095	0.0002	0	D	1.0	D	0.949	D	0.541	N	1.000	D	3.42	M	2.6	T	-0.952	T	0.087	T	0.495	3.694	18.77	4.07	1.312	1.376	9.271	3.694062	3.694062	0	0.000233	0	NA	NA	NA	17.3330094
58	6	128303989	128303989	T	A	exonic	PTPRK	NA	nonsynonymous SNV	PTPRK:NM_002844:exon24:c.A3524T:p.K1175M,PTPRK:NM_001135648:exon25:c.A3542T:p.K1181M	exonic	ENSG00000152894	NA	nonsynonymous SNV	ENSG00000152894:ENST00000368215:exon24:c.A3521T:p.K1174M,ENSG00000152894:ENST00000368226:exon24:c.A3524T:p.K1175M,ENSG00000152894:ENST00000368213:exon25:c.A3542T:p.K1181M,ENSG00000152894:ENST00000368227:exon25:c.A3575T:p.K1192M,ENSG00000152894:ENST00000368210:exon26:c.A3578T:p.K1193M,ENSG00000152894:ENST00000532331:exon27:c.A3590T:p.K1197M,ENSG00000152894:ENST00000368207:exon28:c.A3620T:p.K1207M	Score=583;Name=lod=312	NA	6q22.33	NA	NA	NA	NA	rs144386522	NA	NA	NA	0.000599042	NA	NA	NA	NA	0.0031	NA	NA	NA	NA	0.0004	0.0003	0	D	0.999	D	0.984	D	0.000	D	1.000	D	1.935	M	1.54	T	-0.906	T	0.137	T	0.833	4.502	24.2	5.98	2.289	8.040	16.456	4.502096	4.502096	0	0.000349	0	NA	NA	NA	17.3325844
59	4	79432453	79432453	G	A	exonic	FRAS1	NA	nonsynonymous SNV	FRAS1:NM_025074:exon64:c.G9806A:p.R3269Q	exonic	ENSG00000138759	NA	nonsynonymous SNV	ENSG00000138759:ENST00000264895:exon64:c.G9806A:p.R3269Q	Score=627;Name=lod=469	NA	4q21.21	NA	NA	NA	NA	rs61729366	0.0037	0.0037	0.004	0.00139776	0.006	NA	NA	0.0008	NA	0.01	NA	NA	0.002	0.0057	0.011	0.04	D	1.0	D	0.999	D	0.000	D	1.000	D	2.175	M	2.46	T	-1.046	T	0.097	T	0.758	5.455	35	5.7	2.698	9.657	19.831	5.454638	5.454638	0	0.009813	0.00119	NA	0.007	NA	17.3118204
59	16	16295863	16295863	T	C	exonic	ABCC6	NA	nonsynonymous SNV	ABCC6:NM_001171:exon9:c.A1171G:p.R391G	exonic	ENSG00000091262	NA	nonsynonymous SNV	ENSG00000091262:ENST00000205557:exon9:c.A1171G:p.R391G,ENSG00000091262:ENST00000456970:exon9:c.A1171G:p.R391G	Score=537;Name=lod=203	NA	16p13.11	NA	Name=PU.1	NA	NA	rs72653762	0.0032	0.0032	NA	0.00279553	0.0099	NA	0.0029	NA	0.002	0.01	NA	0.0028	NA	0.0061	0.01	0	D	1.0	D	1.0	D	0.000	U	1.000	D	2.68	M	-2.8	D	0.533	D	0.760	D	0.972	2.833	15.44	1.8	0.510	0.549	9.238	2.832967	2.832967	0	0.009186	0.001821	NA	NA	NA	17.3081474
60	7	92763720	92763720	G	A	exonic	SAMD9L	NA	nonsynonymous SNV	SAMD9L:NM_152703:exon5:c.C1565T:p.A522V	exonic	ENSG00000177409	NA	nonsynonymous SNV	ENSG00000177409:ENST00000318238:exon5:c.C1565T:p.A522V,ENSG00000177409:ENST00000411955:exon6:c.C1565T:p.A522V,ENSG00000177409:ENST00000437805:exon6:c.C1565T:p.A522V	Score=415;Name=lod=65	NA	7q21.2	NA	NA	NA	NA	rs151304501	0.01	0.01	0.005	0.00698882	0.0139	NA	0.0187	0.0015	0.0061	0.01	NA	0.02	0.002	0.0143	0.022	0.01	D	0.996	D	0.929	D	0.000	D	0.974	D	1.955	M	2.28	T	-1.047	T	0.055	T	0.149	3.606	18.36	4.59	2.384	1.276	17.161	3.606454	3.606454	0.01	0.022093	0.004766	NA	0.007	NA	17.2830404
60	16	14042077	14042077	A	G	exonic	ERCC4	NA	nonsynonymous SNV	ERCC4:NM_005236:exon11:c.A2624G:p.E875G	exonic	ENSG00000175595	NA	nonsynonymous SNV	ENSG00000175595:ENST00000311895:exon11:c.A2624G:p.E875G	Score=289;Name=lod=20	NA	16p13.12	NA	NA	NA	NA	rs1800124	0.01	0.01	0.008	0.00579073	0.0199	NA	0.0043	0.0008	0.0051	0.02	NA	0.01	0.002	0.0131	0.02	0	D	0.937	P	0.585	P	0.000	D	1.000	D	2.715	M	2.44	T	-1.045	T	0.050	T	0.252	4.589	25	6.16	2.367	8.711	15.987	4.588915	4.588915	0	0.017442	0.004324	NA	0.007	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116989.3;CLNDSDB=.;CLNDSDBID=.	17.2828914
61	16	8906914	8906914	A	C	exonic	PMM2	NA	nonsynonymous SNV	PMM2:NM_000303:exon7:c.A590C:p.E197A	exonic	ENSG00000140650	NA	nonsynonymous SNV	ENSG00000140650:ENST00000569958:exon4:c.A317C:p.E106A,ENSG00000140650:ENST00000537352:exon5:c.A215C:p.E72A,ENSG00000140650:ENST00000539622:exon6:c.A341C:p.E114A,ENSG00000140650:ENST00000268261:exon7:c.A590C:p.E197A,ENSG00000140650:ENST00000566983:exon7:c.A509C:p.E170A	Score=295;Name=lod=21	NA	16p13.2	NA	NA	NA	NA	rs34258285	0.01	0.01	0.006	0.00898562	0.0249	NA	0.0216	0.0015	0.0031	0.02	NA	0.03	NA	0.0193	0.03	0.47	T	0.018	B	0.024	B	0.000	D	1.000	D	1.645	L	-4.95	D	0.363	D	0.691	D	0.505	1.189	9.835	4.89	1.839	2.489	10.262	1.189414	NA	0.11	0.025465	0.004779	NA	NA	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000078593.1;CLNDSDB=.;CLNDSDBID=.	17.2636684
62	12	51208122	51208122	C	G	exonic	ATF1	NA	nonsynonymous SNV	ATF1:NM_005171:exon6:c.C571G:p.P191A	exonic	ENSG00000123268	NA	nonsynonymous SNV	ENSG00000123268:ENST00000539132:exon5:c.C166G:p.P56A,ENSG00000123268:ENST00000262053:exon6:c.C571G:p.P191A,ENSG00000123268:ENST00000552487:exon6:c.C571G:p.P191A	Score=487;Name=lod=127	NA	12q13.12	NA	NA	NA	NA	rs2230674	0.01	0.01	0.007	0.0091853	0.0258	NA	0.0187	NA	0.0072	0.03	NA	0.02	NA	0.025	0.031	0.03	D	0.999	D	0.994	D	0.000	D	1.000	D	2.175	M	0.21	T	-0.359	T	0.214	T	0.227	2.77	15.22	4.79	2.375	4.463	18.211	2.770176	2.770176	0.03	0.030814	0.006355	NA	0.007	NA	17.2517194
63	X	2835863	2835863	G	T	exonic	ARSD	NA	nonsynonymous SNV	ARSD:NM_001669:exon5:c.C845A:p.A282D	exonic	ENSG00000006756	NA	nonsynonymous SNV	ENSG00000006756:ENST00000381154:exon5:c.C845A:p.A282D	Score=329;Name=lod=29	NA	Xp22.33	NA	NA	NA	NA	rs78034736	0.08	0.08	NA	NA	NA	NA	NA	NA	NA	0.07	0.04	0.09	0.12	0.1017	0.12	0	D	1.0	D	0.993	D	0.001	U	0.000	P	4.72	H	-3.86	D	-0.813	T	0.163	T	0.757	2.89	15.63	3.36	1.338	6.148	14.320	2.889517	2.889517	0	NA	NA	ID=COSM1319458;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	NA	CLINSIG=other;CLNDBN=Malignant_melanoma;CLNREVSTAT=not;CLNACC=RCV000073163.2;CLNDSDB=MedGen:SNOMED_CT;CLNDSDBID=C0025202:2092003	17.2316334
64	1	94473846	94473846	G	A	exonic	ABCA4	NA	nonsynonymous SNV	ABCA4:NM_000350:exon42:c.C5843T:p.P1948L	exonic	ENSG00000198691	NA	nonsynonymous SNV	ENSG00000198691:ENST00000535881:exon5:c.C200T:p.P67L,ENSG00000198691:ENST00000536513:exon7:c.C653T:p.P218L,ENSG00000198691:ENST00000370225:exon42:c.C5843T:p.P1948L	Score=389;Name=lod=51	NA	1p22.1	NA	NA	NA	NA	rs56142141	0.02	0.02	0.007	0.0165735	0.0467	0.001	0.0346	0.0053	0.0041	0.03	NA	0.02	0.0041	0.0306	0.037	0.05	D	0.01	B	0.009	B	0.566	N	1.000	D	1.19	L	-4.04	D	0.044	D	0.764	D	0.172	2.787	15.28	5.35	2.941	2.654	19.614	2.787396	2.787396	0.1	0.037442	0.009759	NA	NA	CLINSIG=non-pathogenic;CLNDBN=not_provided;CLNREVSTAT=single;CLNACC=RCV000085768.2;CLNDSDB=.;CLNDSDBID=.	17.2185914
65	10	101829514	101829514	C	T	exonic	CPN1	NA	nonsynonymous SNV	CPN1:NM_001308:exon3:c.G533A:p.G178D	exonic	ENSG00000120054	NA	nonsynonymous SNV	ENSG00000120054:ENST00000370418:exon3:c.G533A:p.G178D	Score=552;Name=lod=233	NA	10q24.2	Score=826;Name=V$CMYB_01	NA	NA	NA	rs61751507	0.03	0.03	0.029	0.0265575	0.0437	0.0248	0.0634	0.0023	0.0174	0.04	0.03	0.06	0.002	0.0418	0.06	0.2	T	0.863	P	0.764	P	0.000	D	1.000	D	2.075	M	2.58	T	-1.190	T	0.010	T	0.543	2.176	13.23	4.25	1.316	6.045	16.175	2.175745	2.175745	0.02	0.048023	0.010894	NA	0.022	CLINSIG=pathogenic;CLNDBN=Anaphylotoxin_inactivator_deficiency;CLNREVSTAT=single;CLNACC=RCV000007002.1;CLNDSDB=MedGen:OMIM:SNOMED_CT:SNOMED_CT;CLNDSDBID=C0398782:212070:124493003:234627009	17.1998104
66	1	38397423	38397423	C	G	intronic	INPP5B	NA	NA	NA	exonic	ENSG00000204084	NA	nonsynonymous SNV	ENSG00000204084:ENST00000373021:exon6:c.G694C:p.G232R,ENSG00000204084:ENST00000373026:exon6:c.G694C:p.G232R,ENSG00000204084:ENST00000373023:exon7:c.G694C:p.G232R	Score=403;Name=lod=58	NA	1p34.3	Score=881;Name=V$AP2_Q6	Name=TAF1,E2F6_(H-50),ETS1,SP2_(SC-643),HMGN3,GABP,Pol2,YY1,Pol2(phosphoS2),Egr-1,HA-E2F1,YY1_(C-20),Pol2-4H8,USF1_(SC-8983),CCNT2,ELF1_(SC-631),IRF3,USF-1,CHD2_(N-1250)	Name=148	NA	rs199551269	NA	NA	NA	0.000599042	0.002	NA	0.0014	NA	NA	NA	NA	NA	NA	0.007	NA	0	D	0.992	D	0.938	D	0.081	N	1.000	D	.	.	-0.42	T	0.116	D	0.865	D	0.454	1.88	12.25	2.97	0.714	0.207	10.143	1.880272	1.880272	0	NA	NA	NA	NA	NA	17.1576667
67	6	100957344	100957344	T	C	exonic	ASCC3	NA	nonsynonymous SNV	ASCC3:NM_006828:exon42:c.A6527G:p.Y2176C	exonic	ENSG00000112249	NA	nonsynonymous SNV	ENSG00000112249:ENST00000369162:exon42:c.A6527G:p.Y2176C	Score=620;Name=lod=442	Name=Economic and political preferences (immigration/crime)	6q16.3	Score=862;Name=V$OCT1_06	Name=ERalpha_a	Name=7	NA	rs240768	0.11	0.11	0.113	0.136382	0.0517	0.1607	0.1138	0.23	0.0879	0.05	0.13	0.12	0.18	0.082	0.2	0.04	D	0.538	P	0.591	P	0.008	N	0.000	P	1.845	L	0.2	T	-0.741	T	0.172	T	0.123	2.634	14.77	4.84	1.057	3.713	11.233	2.634304	2.634304	0.14	0.046279	0.195188	NA	0.159	NA	17.1533544
68	5	70798541	70798541	A	G	exonic	BDP1	NA	nonsynonymous SNV	BDP1:NM_018429:exon15:c.A2164G:p.K722E	exonic	ENSG00000145734	NA	nonsynonymous SNV	ENSG00000145734:ENST00000358731:exon15:c.A2164G:p.K722E	Score=393;Name=lod=53	NA	5q13.2	NA	NA	NA	NA	rs36009281	0.03	0.03	0.029	0.0325479	0.0885	NA	0.0432	0.003	0.0409	0.07	NA	0.04	0.0041	0.0561	0.084	0.02	D	0.998	D	0.994	D	0.000	D	1.000	D	1.995	M	2.7	T	-1.233	T	0.006	T	0.328	2.981	15.94	4.7	2.109	1.185	10.729	2.98056	2.98056	0	0.083456	0.015046	NA	0.029	NA	17.1052774
69	X	135956467	135956467	C	T	exonic	RBMX	NA	nonsynonymous SNV	RBMX:NM_002139:exon9:c.G1010A:p.S337N	exonic	ENSG00000147274	NA	nonsynonymous SNV	ENSG00000147274:ENST00000565438:exon7:c.G626A:p.S209N,ENSG00000147274:ENST00000570135:exon8:c.G605A:p.S202N,ENSG00000147274:ENST00000320676:exon9:c.G1010A:p.S337N	Score=861;Name=lod=4226	NA	Xq26.3	Score=1000;Name=V$NKX25_01	Name=Pol2-4H8	NA	NA	rs35899675	NA	NA	0.17806	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2332	0.043	0.13	T	0.981	D	0.954	D	0.000	U	0.000	P	1.355	L	-1.08	T	0.014	D	0.537	D	0.085	2.524	14.4	5.4	2.380	4.933	18.431	2.523817	2.523817	0.28	NA	NA	ID=COSM292203;OCCURENCE=1(liver),1(large_intestine)	0.058	NA	17.1001334
69	6	32024395	32024395	C	T	exonic	TNXB	NA	nonsynonymous SNV	TNXB:NM_019105:exon23:c.G8111A:p.R2704H	exonic	ENSG00000168477	NA	nonsynonymous SNV	ENSG00000168477:ENST00000375244:exon23:c.G8111A:p.R2704H,ENSG00000168477:ENST00000375247:exon23:c.G8111A:p.R2704H	Score=304;Name=lod=23	NA	6p21.33	Score=776;Name=V$HEN1_01	NA	NA	NA	rs10947230	0.12	0.12	0.085	0.105431	0.0934	0.0823	0.0749	0.202	0.0327	0.1	0.1	0.1	0.21	0.0785	0.21	0.03	D	1.0	D	0.998	D	0.000	D	0.000	P	3.595	H	3.51	T	-0.946	T	0.064	T	0.195	2.865	15.54	4.61	2.099	2.361	14.409	2.864793	2.864793	0	0.061982	0.157831	NA	0.087	NA	17.0994514
70	X	135956408	135956408	A	G	exonic	RBMX	NA	nonsynonymous SNV	RBMX:NM_002139:exon9:c.T1069C:p.Y357H	exonic	ENSG00000147274	NA	nonsynonymous SNV	ENSG00000147274:ENST00000565438:exon7:c.T685C:p.Y229H,ENSG00000147274:ENST00000570135:exon8:c.T664C:p.Y222H,ENSG00000147274:ENST00000320676:exon9:c.T1069C:p.Y357H	Score=861;Name=lod=4226	NA	Xq26.3	Score=895;Name=V$SPZ1_01	Name=USF-1,Pol2-4H8	NA	NA	rs76876438	NA	NA	0.15739	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2433	0.022	0.08	T	0.995	D	0.969	D	0.000	U	0.000	P	1.7	L	-1.1	T	0.188	D	0.557	D	0.735	1.938	12.44	5.66	1.900	9.184	14.898	1.937872	1.937872	0.04	NA	NA	NA	0.036	NA	17.0900334
71	22	29885016	29885016	G	A	exonic	NEFH	NA	nonsynonymous SNV	NEFH:NM_021076:exon4:c.G1387A:p.E463K	exonic	ENSG00000100285	NA	nonsynonymous SNV	ENSG00000100285:ENST00000310624:exon4:c.G1387A:p.E463K	Score=517;Name=lod=169	NA	22q12.2	NA	NA	NA	NA	rs59371099	0.04	0.04	0.031	0.029353	0.0855	NA	0.0519	0.0053	0.0184	0.08	NA	0.05	0.01	0.0687	0.098	0	D	1.0	D	0.984	D	0.000	D	0.000	P	1.61	L	-1.77	D	-0.521	T	0.062	T	0.272	4.579	24.9	5.79	2.746	6.354	20.031	4.578565	4.578565	0.01	0.09814	0.01566	NA	0.036	CLINSIG=untested;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000057181.1;CLNDSDB=.;CLNDSDBID=.	17.0809934
72	9	131483551	131483551	T	A	exonic	ZDHHC12	NA	nonsynonymous SNV	ZDHHC12:NM_032799:exon5:c.A713T:p.N238I	exonic	ENSG00000160446	NA	nonsynonymous SNV	ENSG00000160446:ENST00000372663:exon5:c.A713T:p.N238I,ENSG00000160446:ENST00000372667:exon5:c.A755T:p.N252I	Score=506;Name=lod=152	NA	9q34.11	NA	NA	NA	NA	rs11539209	0.05	0.05	0.041	0.0561102	0.0706	0.0546	0.0519	0.0159	0.1002	0.06	0.04	0.05	0.03	0.1147	0.077	0	D	1.0	D	0.999	D	0.000	D	1.000	D	2.16	M	0.24	T	-0.755	T	0.042	T	0.379	4.474	23.9	4.94	1.848	7.416	12.542	4.473739	4.473739	0	0.077201	0.019143	NA	0.036	NA	17.0708324
73	8	101719004	101719004	G	A	exonic	PABPC1	NA	nonsynonymous SNV	PABPC1:NM_002568:exon11:c.C1477T:p.R493C	exonic	ENSG00000070756	NA	nonsynonymous SNV	ENSG00000070756:ENST00000517990:exon1:c.C4T:p.R2C,ENSG00000070756:ENST00000522658:exon2:c.C118T:p.R40C,ENSG00000070756:ENST00000318607:exon11:c.C1477T:p.R493C,ENSG00000070756:ENST00000519004:exon12:c.C1342T:p.R448C,ENSG00000070756:ENST00000522387:exon12:c.C1381T:p.R461C	Score=624;Name=lod=459	NA	8q22.3	Score=824;Name=V$AP4_01	Name=CTCF_(SC-5916)	Name=2	NA	rs62513924	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3078	NA	0.03	D	0.452	B	0.302	B	0.000	D	1.000	D	1.565	L	2.5	T	-0.838	T	0.165	T	0.955	3.729	18.94	5.3	2.658	7.248	19.321	3.729404	3.729404	0.02	NA	NA	NA	NA	NA	17.0255334
74	13	39422624	39422624	C	T	exonic	FREM2	NA	nonsynonymous SNV	FREM2:NM_207361:exon8:c.C6196T:p.R2066C	exonic	ENSG00000150893	NA	nonsynonymous SNV	ENSG00000150893:ENST00000280481:exon8:c.C6196T:p.R2066C	Score=525;Name=lod=182	NA	13q13.3	NA	Name=FOXA1_(C-20)	NA	NA	rs9548505	0.09	0.09	0.076	0.109625	0.0895	0.001	0.2522	0.1445	0.0941	0.07	0.0017	0.2	0.12	0.1224	0.2	0.01	D	0.999	D	0.927	D	0.000	D	0.000	P	2.79	M	1.66	T	-1.204	T	0.000	T	0.561	4.615	25.2	5.66	2.690	4.804	19.754	4.614809	4.614809	0.01	0.10907	0.141625	NA	0.087	NA	17.0123634
75	17	526907	526907	G	T	exonic	VPS53	NA	nonsynonymous SNV	VPS53:NM_018289:exon10:c.C895A:p.L299I,VPS53:NM_001128159:exon11:c.C982A:p.L328I	exonic	ENSG00000141252	NA	nonsynonymous SNV	ENSG00000141252:ENST00000570650:exon3:c.C295A:p.L99I,ENSG00000141252:ENST00000291074:exon10:c.C895A:p.L299I,ENSG00000141252:ENST00000389040:exon10:c.C838A:p.L280I,ENSG00000141252:ENST00000437048:exon11:c.C982A:p.L328I,ENSG00000141252:ENST00000571805:exon11:c.C982A:p.L328I,ENSG00000141252:ENST00000446250:exon12:c.C388A:p.L130I	Score=478;Name=lod=117	NA	17p13.3	Score=880;Name=V$HSF1_01	NA	NA	NA	rs16954056	0.14	0.14	0.132	0.0942492	0.1093	0.1855	0.0821	0.0582	0.0419	0.11	0.23	0.12	0.08	0.1116	0.23	0.01	D	0.999	D	0.973	D	0.000	D	0.000	P	2.31	M	1.02	T	-1.214	T	0.000	T	0.549	4.979	29.1	5.7	2.683	9.476	18.829	4.978662	4.978662	0	0.107674	0.066046	NA	0.08	NA	17.0047594
75	11	77583266	77583266	G	A	exonic	AAMDC	NA	nonsynonymous SNV	AAMDC:NM_024684:exon4:c.G274A:p.V92M	exonic	ENSG00000087884	NA	nonsynonymous SNV	ENSG00000087884:ENST00000393427:exon4:c.G274A:p.V92M,ENSG00000087884:ENST00000525034:exon4:c.G331A:p.V111M,ENSG00000087884:ENST00000525409:exon4:c.G178A:p.V60M,ENSG00000087884:ENST00000526415:exon5:c.G274A:p.V92M,ENSG00000087884:ENST00000533193:exon5:c.G412A:p.V138M	Score=417;Name=lod=66	NA	11q14.1	Score=919;Name=V$CDPCR3HD_01	NA	NA	NA	rs2186564	0.15	0.15	0.142	0.140974	0.1004	0.1766	0.1888	0.1286	0.1288	0.1	0.2	0.15	0.15	0.1335	0.2	0.06	T	0.998	D	0.953	D	0.000	D	0.000	P	2.28	M	-1.51	D	-1.099	T	0.002	T	0.524	4.245	22.1	5.28	2.746	6.493	14.341	4.244571	4.244571	0.01	0.096342	0.119545	ID=COSM147295;OCCURENCE=1(stomach)	0.152	NA	17.0030914
75	12	52713088	52713088	G	A	exonic	KRT83	NA	nonsynonymous SNV	KRT83:NM_002282:exon2:c.C445T:p.R149C	exonic	ENSG00000170523	NA	nonsynonymous SNV	ENSG00000170523:ENST00000293670:exon2:c.C445T:p.R149C	Score=633;Name=lod=498	NA	12q13.13	NA	Name=CTCF_(SC-5916),SMC3_(ab9263),CTCF,Rad21	Name=17	NA	rs2857663	0.1	0.1	0.113	0.127796	0.1034	0.0804	0.0576	0.1589	0.2096	0.1	0.07	0.08	0.16	0.119	0.16	0.01	D	0.067	B	0.077	B	0.048	U	1.000	D	3.115	M	-2.54	D	-0.757	T	0.010	T	0.306	3.343	17.25	4.39	2.157	9.621	12.453	3.342823	3.342823	0.01	0.111977	0.146164	NA	0.203	NA	16.9989564
75	11	5510598	5510598	A	T	exonic	OR52D1	NA	nonsynonymous SNV	OR52D1:NM_001005163:exon1:c.A662T:p.Y221F	exonic	ENSG00000181609	NA	nonsynonymous SNV	ENSG00000181609:ENST00000322641:exon1:c.A662T:p.Y221F	Score=346;Name=lod=34	NA	11p15.4	NA	Name=Pol2(b)	NA	NA	rs7950082	0.08	0.08	0.078	0.0754792	0.1163	0.003	0.0735	0.084	0.0982	0.13	0.01	0.07	0.11	0.1013	0.13	0	D	0.999	D	0.98	D	0.000	D	0.000	P	4.35	H	6.99	T	-1.148	T	0.000	T	0.244	3.591	18.29	5.58	2.343	8.853	14.723	3.590815	3.590815	0	0.120084	0.095184	NA	0.094	NA	16.9956494
76	2	152500449	152500449	C	G	exonic	NEB	NA	nonsynonymous SNV	NEB:NM_001164507:exon57:c.G7839C:p.K2613N,NEB:NM_001164508:exon57:c.G7839C:p.K2613N,NEB:NM_001271208:exon57:c.G7839C:p.K2613N,NEB:NM_004543:exon57:c.G7839C:p.K2613N	exonic	ENSG00000183091	NA	nonsynonymous SNV	ENSG00000183091:ENST00000603639:exon55:c.G7839C:p.K2613N,ENSG00000183091:ENST00000604864:exon55:c.G7839C:p.K2613N,ENSG00000183091:ENST00000172853:exon57:c.G7839C:p.K2613N,ENSG00000183091:ENST00000397345:exon57:c.G7839C:p.K2613N,ENSG00000183091:ENST00000409198:exon57:c.G7839C:p.K2613N,ENSG00000183091:ENST00000427231:exon57:c.G7839C:p.K2613N	Score=574;Name=lod=286	NA	2q23.3	Score=876;Name=V$NF1_Q6	NA	NA	NA	rs13013209	0.3	0.3	0.28	0.293331	0.4662	0.2609	0.4438	0.031	0.3967	0.46	0.27	0.39	0.03	0.415	0.47	0.02	D	0.999	D	0.998	D	0.000	D	0.000	P	2.98	M	1.13	T	-0.977	T	0.000	T	0.227	4.324	22.7	5.77	2.729	4.897	19.994	4.323892	4.323892	0	0.47369	0.098309	NA	0.29	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000081143.3;CLNDSDB=.;CLNDSDBID=.	16.9784434
76	16	58768129	58768129	C	A	exonic	GOT2	NA	nonsynonymous SNV	GOT2:NM_002080:exon1:c.G4T:p.A2S	exonic	ENSG00000125166	NA	nonsynonymous SNV	ENSG00000125166:ENST00000245206:exon1:c.G4T:p.A2S,ENSG00000125166:ENST00000434819:exon1:c.G4T:p.A2S,ENSG00000125166:ENST00000568368:exon1:c.G4T:p.A2S	Score=429;Name=lod=74	NA	16q21	Score=802;Name=V$YY1_02	Name=NRSF,PU.1,Pol2,TCF4,Pol2(phosphoS2),TAF1,POU2F2,E2F4,HMGN3,GABP,CTCF,GTF2F1_(RAP-74),Oct-2,Ini1,Pol2-4H8,ZNF263,TBP,c-Myc,NFKB,HEY1	NA	NA	rs11558171	0.05	0.05	0.046	0.0433307	0.1203	NA	0.0432	0.0045	0.0613	0.12	NA	0.05	0.01	0.1218	0.12	.	.	0.984	D	0.935	D	0.000	D	0.954	D	1.1	L	2.14	T	-1.175	T	0.002	T	0.23	3.449	17.68	4.94	2.558	3.168	13.550	3.449346	3.449346	0.08	0.112958	0.023245	ID=COSM435472;OCCURENCE=1(breast)	0.022	NA	16.9782754
77	8	53852871	53852871	A	T	exonic	NPBWR1	NA	nonsynonymous SNV	NPBWR1:NM_005285:exon1:c.A404T:p.Y135F	exonic	ENSG00000183729	NA	nonsynonymous SNV	ENSG00000183729:ENST00000331251:exon1:c.A404T:p.Y135F	Score=558;Name=lod=247	NA	8q11.23	NA	NA	NA	NA	rs33977775	0.09	0.09	0.102	0.0870607	0.1302	0.12	0.085	0.0038	0.1227	0.13	0.12	0.09	0.01	0.1146	0.13	0	D	1.0	D	0.999	D	0.000	D	0.000	P	2.425	M	-2.2	D	-0.710	T	0.039	T	0.243	4.817	27.3	5.06	2.120	6.875	14.971	4.816662	4.816662	0	0.118277	0.029759	NA	0.014	NA	16.9702564
77	16	56602798	56602798	G	A	exonic	MT4	NA	nonsynonymous SNV	MT4:NM_032935:exon3:c.G143A:p.G48D	exonic	ENSG00000102891	NA	nonsynonymous SNV	ENSG00000102891:ENST00000219162:exon3:c.G143A:p.G48D	Score=428;Name=lod=73	NA	16q12.2	Score=993;Name=V$AP2ALPHA_01	NA	NA	NA	rs11643815	0.06	0.06	0.04	0.0563099	0.1252	0.0079	0.098	0.0076	0.0716	0.12	0.0017	0.07	0.01	0.1108	0.13	0	D	1.0	D	1.0	D	0.000	D	1.000	D	.	.	2.65	T	-1.273	T	0.001	T	0.356	3.472	17.77	5.92	2.810	6.701	15.821	3.471985	3.471985	0	0.132007	0.029197	NA	0.029	NA	16.9653264
78	17	20108184	20108184	C	G	exonic	SPECC1	NA	nonsynonymous SNV	SPECC1:NM_001033554:exon2:c.C579G:p.S193R,SPECC1:NM_001033555:exon2:c.C579G:p.S193R,SPECC1:NM_001243438:exon2:c.C579G:p.S193R,SPECC1:NM_001033553:exon4:c.C822G:p.S274R,SPECC1:NM_001243439:exon4:c.C822G:p.S274R,SPECC1:NM_152904:exon4:c.C822G:p.S274R	exonic	ENSG00000128487	NA	nonsynonymous SNV	ENSG00000128487:ENST00000395522:exon2:c.C579G:p.S193R,ENSG00000128487:ENST00000395525:exon2:c.C579G:p.S193R,ENSG00000128487:ENST00000395530:exon2:c.C579G:p.S193R,ENSG00000128487:ENST00000261503:exon4:c.C822G:p.S274R,ENSG00000128487:ENST00000395527:exon4:c.C822G:p.S274R,ENSG00000128487:ENST00000395529:exon4:c.C822G:p.S274R	Score=405;Name=lod=59	NA	17p11.2	Score=936;Name=V$LMO2COM_01	NA	NA	NA	rs9908032	0.1	0.1	0.097	0.113618	0.1223	0.0942	0.1455	0.093	0.1299	0.13	0.08	0.12	0.09	0.1182	0.13	0.04	D	1.0	D	0.999	D	0.000	D	0.000	P	2.005	M	2.77	T	-0.961	T	0.010	T	0.145	4.032	20.7	5.38	2.698	3.068	17.005	4.031537	4.031537	0.13	0.134186	0.114843	NA	0.152	NA	16.9586474
79	8	101718968	101718968	C	T	exonic	PABPC1	NA	nonsynonymous SNV	PABPC1:NM_002568:exon11:c.G1513A:p.V505I	exonic	ENSG00000070756	NA	nonsynonymous SNV	ENSG00000070756:ENST00000517990:exon1:c.G40A:p.V14I,ENSG00000070756:ENST00000522658:exon2:c.G154A:p.V52I,ENSG00000070756:ENST00000318607:exon11:c.G1513A:p.V505I,ENSG00000070756:ENST00000519004:exon12:c.G1378A:p.V460I,ENSG00000070756:ENST00000522387:exon12:c.G1417A:p.V473I	Score=624;Name=lod=459	NA	8q22.3	NA	Name=CTCF_(SC-5916)	Name=2	Score=67;Name=2348421_0_+_67	rs62513922	NA	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4114	NA	0.4	T	0.003	B	0.008	B	0.000	D	1.000	D	1.955	M	0.95	T	-0.998	T	0.128	T	0.534	4.874	27.9	5.4	2.706	7.233	19.528	4.873827	4.873827	0.31	NA	NA	NA	NA	NA	16.9219334
79	3	63967900	63967900	A	G	exonic	ATXN7	NA	nonsynonymous SNV	ATXN7:NM_001128149:exon3:c.A356G:p.K119R,ATXN7:NM_001177387:exon6:c.A791G:p.K264R,ATXN7:NM_000333:exon7:c.A791G:p.K264R	exonic	ENSG00000163635	NA	nonsynonymous SNV	ENSG00000163635:ENST00000484332:exon3:c.A356G:p.K119R,ENSG00000163635:ENST00000538065:exon5:c.A791G:p.K264R,ENSG00000163635:ENST00000487717:exon6:c.A791G:p.K264R,ENSG00000163635:ENST00000295900:exon7:c.A791G:p.K264R,ENSG00000163635:ENST00000398590:exon7:c.A791G:p.K264R	Score=582;Name=lod=310	NA	3p14.1	Score=896;Name=V$YY1_01	Name=c-Myc,PU.1	NA	NA	rs1053338	0.13	0.13	0.104	0.114617	0.1471	0.1478	0.1916	0.0121	0.1309	0.15	0.18	0.17	0.01	0.1344	0.18	0.11	T	0.997	D	0.985	D	0.000	D	0.000	P	1.185	L	1.35	T	-1.101	T	0.000	T	0.16	3.251	16.9	4.57	1.005	4.062	11.602	3.251328	3.251328	0.03	0.130941	0.035123	NA	0.08	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116489.2;CLNDSDB=.;CLNDSDBID=.	16.9208924
80	21	28305212	28305212	C	T	exonic	ADAMTS5	NA	nonsynonymous SNV	ADAMTS5:NM_007038:exon5:c.G1841A:p.R614H	exonic	ENSG00000154736	NA	nonsynonymous SNV	ENSG00000154736:ENST00000284987:exon5:c.G1841A:p.R614H	Score=516;Name=lod=167	NA	21q21.3	Score=869;Name=V$YY1_01	NA	NA	NA	rs2830585	0.12	0.12	0.12	0.0988419	0.1799	0.0992	0.1138	0.0484	0.0726	0.18	0.11	0.11	0.05	0.1258	0.18	0	D	1.0	D	0.999	D	0.000	D	0.000	P	2.87	M	0.49	T	-1.067	T	0.002	T	0.456	5.474	35	6.03	2.854	7.487	20.567	5.473629	5.473629	NA	0.159535	0.072401	ID=COSM1413521;OCCURENCE=3(large_intestine)	0.188	NA	16.8680984
81	6	154360797	154360797	A	G	exonic	OPRM1	NA	nonsynonymous SNV	OPRM1:NM_000914:exon1:c.A118G:p.N40D,OPRM1:NM_001008503:exon1:c.A118G:p.N40D,OPRM1:NM_001008504:exon1:c.A118G:p.N40D,OPRM1:NM_001008505:exon1:c.A118G:p.N40D,OPRM1:NM_001145282:exon1:c.A118G:p.N40D,OPRM1:NM_001145283:exon1:c.A118G:p.N40D,OPRM1:NM_001145284:exon1:c.A118G:p.N40D,OPRM1:NM_001145285:exon1:c.A118G:p.N40D,OPRM1:NM_001145286:exon1:c.A118G:p.N40D,OPRM1:NM_001145279:exon3:c.A397G:p.N133D	exonic	ENSG00000112038	NA	nonsynonymous SNV	ENSG00000112038:ENST00000229768:exon1:c.A118G:p.N40D,ENSG00000112038:ENST00000330432:exon1:c.A118G:p.N40D,ENSG00000112038:ENST00000337049:exon1:c.A118G:p.N40D,ENSG00000112038:ENST00000360422:exon1:c.A118G:p.N40D,ENSG00000112038:ENST00000414028:exon1:c.A118G:p.N40D,ENSG00000112038:ENST00000419506:exon1:c.A118G:p.N40D,ENSG00000112038:ENST00000428397:exon1:c.A118G:p.N40D,ENSG00000112038:ENST00000435918:exon1:c.A118G:p.N40D,ENSG00000112038:ENST00000452687:exon1:c.A118G:p.N40D,ENSG00000112038:ENST00000519083:exon1:c.A118G:p.N40D,ENSG00000112038:ENST00000522739:exon1:c.A118G:p.N40D,ENSG00000112038:ENST00000524150:exon1:c.A118G:p.N40D,ENSG00000112038:ENST00000524163:exon1:c.A118G:p.N40D,ENSG00000112038:ENST00000520282:exon2:c.A262G:p.N88D,ENSG00000112038:ENST00000434900:exon3:c.A397G:p.N133D	Score=431;Name=lod=75	NA	6q25.2	Score=693;Name=V$BRACH_01	Name=CtBP2,NRSF	Name=44	NA	rs1799971	0.19	0.19	0.172	0.223442	0.162	0.3929	0.2003	0.0091	0.4182	0.16	0.38	0.19	0.01	0.1856	0.38	0.01	D	0.95	P	0.775	P	0.137	N	0.000	P	0	N	2.16	T	-0.989	T	0.037	T	0.363	4.356	22.9	5.75	2.200	2.322	15.041	4.355925	4.355925	0.02	0.128792	0.030622	NA	0.094	CLINSIG=unknown;CLNDBN=Opioid_dependence_1;CLNREVSTAT=single;CLNACC=RCV000010146.2;CLNDSDB=MedGen:OMIM;CLNDSDBID=C1864733:610064	16.8569414
82	7	151945007	151945007	C	T	exonic	MLL3	NA	nonsynonymous SNV	MLL3:NM_170606:exon14:c.G2512A:p.G838S	exonic	ENSG00000055609	NA	nonsynonymous SNV	ENSG00000055609:ENST00000262189:exon14:c.G2512A:p.G838S,ENSG00000055609:ENST00000355193:exon14:c.G2512A:p.G838S	Score=651;Name=lod=589	NA	7q36.1	Score=766;Name=V$MYOGNF1_01	NA	NA	NA	rs2479172	NA	NA	0.581	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4944	NA	0.43	T	1.0	D	0.999	D	0.000	D	1.000	D	1.04	L	-2.3	D	-0.835	T	0.230	T	0.622	4.381	23.1	5.67	2.658	7.484	19.769	4.381186	4.381186	0.01	NA	NA	NA	NA	NA	16.8389334
83	17	45214604	45214604	A	T	exonic	CDC27	NA	nonsynonymous SNV	CDC27:NM_001114091:exon14:c.T1845A:p.H615Q,CDC27:NM_001256:exon14:c.T1827A:p.H609Q	exonic	ENSG00000004897	NA	nonsynonymous SNV	ENSG00000004897:ENST00000446365:exon13:c.T1644A:p.H548Q,ENSG00000004897:ENST00000066544:exon14:c.T1827A:p.H609Q,ENSG00000004897:ENST00000527547:exon14:c.T1824A:p.H608Q,ENSG00000004897:ENST00000531206:exon14:c.T1845A:p.H615Q	Score=658;Name=lod=631	NA	17q21.32	Score=721;Name=V$SRF_01	Name=CTCF,STAT1,TAF7_(SQ-8),CTCFL_(SC-98982),TAF1,GABP,ZBTB33,ZNF274,IRF3,SUZ12,YY1,GCN5,c-Fos,GATA-2,c-Jun,EBF,ZZZ3	Name=148	NA	rs75661039	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4987	NA	0	D	0.999	D	0.983	D	0.000	D	1.000	D	3.08	M	0.34	T	-0.378	T	0.345	T	0.879	4.388	23.2	-1.66	-0.648	0.088	11.920	4.38775	4.38775	0	NA	NA	NA	NA	NA	16.8346334
83	1	144994658	144994658	C	A	exonic	PDE4DIP	NA	nonsynonymous SNV	PDE4DIP:NM_001002810:exon1:c.G74T:p.R25L,PDE4DIP:NM_001002812:exon1:c.G74T:p.R25L,PDE4DIP:NM_001198834:exon1:c.G74T:p.R25L,PDE4DIP:NM_014644:exon1:c.G74T:p.R25L,PDE4DIP:NM_001195261:exon2:c.G83T:p.R28L,PDE4DIP:NM_001198832:exon4:c.G272T:p.R91L,PDE4DIP:NM_022359:exon4:c.G485T:p.R162L	exonic	ENSG00000178104	NA	nonsynonymous SNV	ENSG00000178104:ENST00000369347:exon1:c.G74T:p.R25L,ENSG00000178104:ENST00000369349:exon1:c.G74T:p.R25L,ENSG00000178104:ENST00000369351:exon1:c.G74T:p.R25L,ENSG00000178104:ENST00000369354:exon1:c.G74T:p.R25L,ENSG00000178104:ENST00000369356:exon1:c.G74T:p.R25L,ENSG00000178104:ENST00000526445:exon1:c.G74T:p.R25L,ENSG00000178104:ENST00000528129:exon2:c.G83T:p.R28L,ENSG00000178104:ENST00000534536:exon2:c.G83T:p.R28L,ENSG00000178104:ENST00000313382:exon4:c.G272T:p.R91L,ENSG00000178104:ENST00000369348:exon4:c.G485T:p.R162L,ENSG00000178104:ENST00000369359:exon4:c.G485T:p.R162L,ENSG00000178104:ENST00000530740:exon4:c.G485T:p.R162L,ENSG00000178104:ENST00000530822:exon4:c.G272T:p.R91L,ENSG00000178104:ENST00000531369:exon4:c.G275T:p.R92L	Score=720;Name=lod=1125	NA	1q21.1	NA	NA	Name=52	NA	rs1664022	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.4998	0.5	0	D	1.0	D	1.0	D	.	.	1.000	D	2.945	M	1.47	T	-0.625	T	0.209	T	0.997	5.72	36	5.78	2.731	7.708	17.500	5.719624	5.719624	0	NA	NA	NA	0.5	NA	16.8335334
83	1	144871738	144871738	C	A	exonic	PDE4DIP	NA	nonsynonymous SNV	PDE4DIP:NM_001198834:exon32:c.G5224T:p.A1742S,PDE4DIP:NM_014644:exon32:c.G5224T:p.A1742S	exonic	ENSG00000178104	NA	nonsynonymous SNV	ENSG00000178104:ENST00000369354:exon32:c.G5224T:p.A1742S,ENSG00000178104:ENST00000369356:exon32:c.G5224T:p.A1742S,ENSG00000178104:ENST00000530740:exon34:c.G5479T:p.A1827S,ENSG00000178104:ENST00000369359:exon35:c.G5632T:p.A1878S	Score=574;Name=lod=288	NA	1q21.1	Score=881;Name=V$NF1_Q6	Name=PU.1	NA	NA	rs1698605	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	0.48	T	0.997	D	0.985	D	.	.	1.000	D	1.995	M	4.7	T	-0.798	T	0.015	T	0.179	5.071	31	5.97	2.834	6.650	17.918	5.071375	5.071375	0.06	NA	NA	NA	0.442	NA	16.8333334
83	1	144931330	144931330	C	T	exonic	PDE4DIP	NA	nonsynonymous SNV	PDE4DIP:NM_001002811:exon1:c.G379A:p.A127T	exonic	ENSG00000178104	NA	nonsynonymous SNV	ENSG00000178104:ENST00000313431:exon1:c.G379A:p.A127T,ENSG00000178104:ENST00000529945:exon1:c.G379A:p.A127T	Score=500;Name=lod=143	NA	1q21.1	NA	Name=c-Myc,HA-E2F1,ZNF263	Name=134	NA	rs2762745	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	0.02	D	1.0	D	0.988	D	.	.	1.000	D	1.87	L	2.56	T	-1.152	T	0.064	T	0.303	4.031	20.7	5.3	2.467	6.056	16.437	4.031493	4.031493	0.08	NA	NA	NA	0.5	NA	16.8333334
83	4	154279631	154279631	A	G	exonic	MND1	NA	nonsynonymous SNV	MND1:NM_001253861:exon4:c.A133G:p.M45V,MND1:NM_032117:exon4:c.A133G:p.M45V	exonic	ENSG00000121211	NA	nonsynonymous SNV	ENSG00000121211:ENST00000504860:exon3:c.A88G:p.M30V,ENSG00000121211:ENST00000240488:exon4:c.A133G:p.M45V,ENSG00000121211:ENST00000508731:exon4:c.A88G:p.M30V,ENSG00000121211:ENST00000509752:exon4:c.A133G:p.M45V	Score=603;Name=lod=377	NA	4q31.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.06	T	0.973	D	0.848	P	0.000	D	1.000	D	2.34	M	.	.	-0.224	T	0.395	T	0.896	2.993	15.98	5.7	2.165	7.047	15.959	2.992863	2.992863	0.03	NA	NA	NA	NA	NA	16.8333334
83	11	92531088	92531088	T	A	exonic	FAT3	NA	nonsynonymous SNV	FAT3:NM_001008781:exon9:c.T4909A:p.F1637I	exonic	ENSG00000165323	NA	nonsynonymous SNV	ENSG00000165323:ENST00000298047:exon9:c.T4909A:p.F1637I,ENSG00000165323:ENST00000409404:exon9:c.T4909A:p.F1637I,ENSG00000165323:ENST00000525166:exon9:c.T4459A:p.F1487I	Score=435;Name=lod=78	NA	11q14.3	Score=836;Name=V$ER_Q6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.01	D	0.962	D	0.604	P	.	.	1.000	D	1.54	L	0.64	T	-0.787	T	0.177	T	0.605	3.834	19.47	5.81	2.224	7.975	16.167	3.83398	3.83398	0.01	NA	NA	NA	NA	NA	16.8333334
83	16	24834847	24834847	C	A	exonic	TNRC6A	NA	nonsynonymous SNV	TNRC6A:NM_014494:exon25:c.C5608A:p.P1870T	exonic	ENSG00000090905	NA	nonsynonymous SNV	ENSG00000090905:ENST00000432286:exon8:c.C1042A:p.P348T,ENSG00000090905:ENST00000450465:exon18:c.C2440A:p.P814T,ENSG00000090905:ENST00000315183:exon24:c.C5461A:p.P1821T,ENSG00000090905:ENST00000395799:exon25:c.C5608A:p.P1870T	Score=695;Name=lod=890	NA	16p12.1	Score=745;Name=V$MYOGNF1_01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.17	T	0.976	D	0.761	P	0.000	D	1.000	D	0.415	N	2.76	T	-0.681	T	0.204	T	0.468	1.806	12	5.64	2.638	3.601	19.710	1.806007	1.806007	0.47	NA	NA	NA	NA	NA	16.8333334
83	2	209010521	209010521	G	A	exonic	CRYGB	NA	nonsynonymous SNV	CRYGB:NM_005210:exon2:c.C229T:p.R77C	exonic	ENSG00000182187	NA	nonsynonymous SNV	ENSG00000182187:ENST00000260988:exon2:c.C229T:p.R77C	Score=464;Name=lod=103	NA	2q34	Score=801;Name=V$TCF11MAFG_01	NA	NA	NA	rs201502749	0.0005	0.0005	NA	0.000199681	NA	0.001	NA	NA	NA	NA	0.0017	NA	NA	0.00004222	0.0017	0.04	D	0.777	P	0.343	B	0.000	D	1.000	D	2.71	M	-1.05	T	-0.125	T	0.427	T	0.413	2.277	13.57	2.74	1.314	1.516	10.103	2.276697	2.276697	0.05	NA	NA	ID=COSM573104;OCCURENCE=1(lung)	NA	NA	16.8332912
83	3	54933874	54933874	C	T	exonic	CACNA2D3	NA	nonsynonymous SNV	CACNA2D3:NM_018398:exon27:c.C2428T:p.R810W	exonic	ENSG00000157445	NA	nonsynonymous SNV	ENSG00000157445:ENST00000490478:exon26:c.C2146T:p.R716W,ENSG00000157445:ENST00000288197:exon27:c.C2428T:p.R810W,ENSG00000157445:ENST00000474759:exon27:c.C2428T:p.R810W,ENSG00000157445:ENST00000415676:exon28:c.C2428T:p.R810W	Score=537;Name=lod=203	NA	3p14.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00009301	NA	0.03	D	0.998	D	0.644	P	0.000	D	1.000	D	1.245	L	-0.53	T	-0.497	T	0.291	T	0.837	4.382	23.2	4.63	2.624	3.589	10.541	4.381507	4.381507	0.02	NA	NA	NA	NA	NA	16.8332404
83	1	202126900	202126900	C	T	exonic	PTPN7	NA	nonsynonymous SNV	PTPN7:NM_080588:exon3:c.G475A:p.A159T,PTPN7:NM_001199797:exon4:c.G580A:p.A194T,PTPN7:NM_002832:exon4:c.G673A:p.A225T	exonic	ENSG00000143851	NA	nonsynonymous SNV	ENSG00000143851:ENST00000367279:exon3:c.G475A:p.A159T,ENSG00000143851:ENST00000308986:exon4:c.G358A:p.A120T,ENSG00000143851:ENST00000309017:exon4:c.G673A:p.A225T,ENSG00000143851:ENST00000435759:exon4:c.G377A:p.R126H,ENSG00000143851:ENST00000464870:exon4:c.G358A:p.A120T,ENSG00000143851:ENST00000467283:exon4:c.G355A:p.A119T,ENSG00000143851:ENST00000476061:exon4:c.G355A:p.A119T,ENSG00000143851:ENST00000477554:exon4:c.G601A:p.A201T,ENSG00000143851:ENST00000486116:exon4:c.G358A:p.A120T,ENSG00000143851:ENST00000495688:exon4:c.G358A:p.A120T,ENSG00000143851:ENST00000496197:exon4:c.G305A:p.R102H	Score=516;Name=lod=167	NA	1q32.1	Score=761;Name=V$P53_01	NA	Name=3	NA	rs149783764	0.0005	0.0005	NA	0.000399361	0.002	NA	NA	NA	NA	0.0013	NA	NA	NA	0.0004	0.0013	0.11	T	0.983	D	0.713	P	0.000	D	1.000	D	0.945	L	2.76	T	-0.603	T	0.237	T	0.549	2.399	13.98	5.18	2.400	1.862	18.677	2.399048	2.399048	0.08	0.000349	0.000227	NA	NA	NA	16.8305844
83	2	179597590	179597590	T	C	exonic	TTN	NA	nonsynonymous SNV	TTN:NM_133378:exon52:c.A12581G:p.K4194R,TTN:NM_001256850:exon53:c.A15362G:p.K5121R,TTN:NM_001267550:exon55:c.A16313G:p.K5438R	exonic	ENSG00000155657	NA	nonsynonymous SNV	ENSG00000155657:ENST00000342992:exon52:c.A12581G:p.K4194R,ENSG00000155657:ENST00000591111:exon53:c.A15362G:p.K5121R,ENSG00000155657:ENST00000589042:exon55:c.A16313G:p.K5438R	Score=463;Name=lod=102	NA	2q31.2	Score=777;Name=V$HEN1_01	NA	NA	NA	rs190636272	0.0005	0.0005	NA	0.000199681	0.001	NA	NA	NA	NA	0.0013	NA	NA	NA	0.0008	0.0013	0	D	0.98	D	0.819	P	.	.	1.000	D	0.3	N	-0.26	T	-0.428	T	0.279	T	0.468	2.052	12.82	6.17	2.371	6.036	16.822	2.051998	2.051998	NA	0.000964	0.000254	NA	NA	CLINSIG=unknown;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000039885.1;CLNDSDB=.;CLNDSDBID=.	16.8305694
84	4	57829669	57829669	G	A	exonic	NOA1	NA	nonsynonymous SNV	NOA1:NM_032313:exon7:c.C2044T:p.P682S	exonic	ENSG00000084092	NA	nonsynonymous SNV	ENSG00000084092:ENST00000264230:exon7:c.C2044T:p.P682S	Score=439;Name=lod=81	NA	4q12	NA	NA	NA	NA	rs61747375	0.0027	0.0027	NA	0.00379393	0.004	NA	0.0043	NA	0.0123	0.01	NA	0.01	NA	0.0031	0.011	0.01	D	0.997	D	0.861	P	0.000	D	1.000	D	2.585	M	1.1	T	-0.540	T	0.211	T	0.246	3.875	19.69	5.41	2.681	5.124	19.159	3.875361	3.875361	0	0.002326	0.001135	NA	0.007	NA	16.8239074
84	1	151374025	151374025	T	C	exonic	PSMB4	NA	nonsynonymous SNV	PSMB4:NM_002796:exon6:c.T701C:p.I234T	exonic	ENSG00000159377	NA	nonsynonymous SNV	ENSG00000159377:ENST00000290541:exon6:c.T701C:p.I234T	Score=431;Name=lod=75	NA	1q21.3	Score=822;Name=V$IRF7_01	NA	Name=28	NA	rs4603	0.2	0.2	0.18	0.192093	0.1461	0.3165	0.3026	0.0666	0.2025	0.15	0.35	0.28	0.05	0.1937	0.35	0	D	0.836	P	0.776	P	0.000	D	0.000	P	2.845	M	1.74	T	-0.840	T	0.120	T	0.29	3.972	20.3	5.99	2.291	7.791	13.867	3.972373	3.972373	0	0.172791	0.09419	NA	0.152	NA	16.8207424
84	15	41679685	41679685	G	C	exonic	NDUFAF1	NA	nonsynonymous SNV	NDUFAF1:NM_016013:exon5:c.C941G:p.A314G	exonic	ENSG00000137806	NA	nonsynonymous SNV	ENSG00000137806:ENST00000260361:exon5:c.C941G:p.A314G	Score=539;Name=lod=207	NA	15q15.1	Score=895;Name=V$PAX4_02	NA	NA	NA	rs12900702	0.09	0.09	0.068	0.0720847	0.1849	NA	0.111	0.0121	0.0838	0.19	NA	0.13	0.01	0.1382	0.19	0.01	D	0.952	P	0.683	P	0.000	D	0.000	P	2.18	M	-0.14	T	-1.176	T	0.001	T	0.174	5.19	32	5.58	2.644	8.859	19.592	5.189559	5.189559	0.01	0.19	0.036995	NA	0.08	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117704.2;CLNDSDB=.;CLNDSDBID=.	16.8202334
85	17	17697404	17697404	C	T	exonic	RAI1	NA	nonsynonymous SNV	RAI1:NM_030665:exon3:c.C1142T:p.A381V	exonic	ENSG00000108557	NA	nonsynonymous SNV	ENSG00000108557:ENST00000261641:exon1:c.C1142T:p.A381V,ENSG00000108557:ENST00000395774:exon2:c.C1142T:p.A381V,ENSG00000108557:ENST00000353383:exon3:c.C1142T:p.A381V	Score=422;Name=lod=69	NA	17p11.2	NA	NA	NA	NA	rs113208290	0.01	0.01	NA	0.00299521	0.0109	NA	0.0043	NA	0.001	0.01	NA	0.01	NA	0.0036	0.011	0.04	D	0.976	D	0.696	P	0.005	N	1.000	D	1.935	M	1.44	T	-0.975	T	0.106	T	0.67	3.01	16.04	5.55	2.621	3.141	19.494	3.010211	3.010211	0.01	0.004651	0.001589	NA	0.007	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000082255.3;CLNDSDB=.;CLNDSDBID=.	16.8141824
85	2	170029657	170029657	C	T	exonic	LRP2	NA	nonsynonymous SNV	LRP2:NM_004525:exon57:c.G11092A:p.V3698M	exonic	ENSG00000081479	NA	nonsynonymous SNV	ENSG00000081479:ENST00000263816:exon57:c.G11092A:p.V3698M	Score=429;Name=lod=74	NA	2q31.1	Score=830;Name=V$CHOP_01	NA	NA	NA	rs34355135	0.0041	0.0041	0.005	0.00379393	0.006	NA	0.0115	NA	0.0051	0.01	NA	0.01	0.0041	0.0055	0.01	0.23	T	0.607	P	0.145	B	0.000	N	1.000	D	3.27	M	-3.93	D	0.063	D	0.724	D	0.149	1.279	10.18	-0.879	-0.167	1.262	3.473	1.279458	1.279458	0.04	0.007791	0.001589	NA	NA	CLINSIG=unknown;CLNDBN=not_provided;CLNREVSTAT=single;CLNACC=RCV000117500.1;CLNDSDB=.;CLNDSDBID=.	16.8140424
86	3	167320010	167320010	T	C	exonic	WDR49	NA	nonsynonymous SNV	WDR49:NM_178824:exon3:c.A157G:p.K53E	exonic	ENSG00000174776	NA	nonsynonymous SNV	ENSG00000174776:ENST00000308378:exon3:c.A157G:p.K53E,ENSG00000174776:ENST00000453925:exon3:c.A316G:p.K106E,ENSG00000174776:ENST00000479765:exon7:c.A1180G:p.K394E	Score=532;Name=lod=193	NA	3q26.1	NA	Name=NANOG_(SC-33759),SP1	Name=3	NA	rs75218075	0.07	0.07	0.07	0.0726837	0.005	0.2034	0.0101	0.087	0.0327	0.01	0.19	0.01	0.08	0.0228	0.19	0.17	T	0.997	D	0.905	P	0.001	D	1.000	D	1.66	L	0.23	T	-1.063	T	0.001	T	0.496	4.219	21.9	5.4	2.038	2.996	14.431	4.219294	4.219294	0	0.001977	0.063323	NA	0.051	NA	16.8035564
86	20	25259006	25259006	G	T	exonic	PYGB	NA	nonsynonymous SNV	PYGB:NM_002862:exon8:c.G907T:p.A303S	exonic	ENSG00000100994	NA	nonsynonymous SNV	ENSG00000100994:ENST00000216962:exon8:c.G907T:p.A303S	Score=630;Name=lod=484	NA	20p11.21	Score=797;Name=V$PAX5_02	NA	NA	NA	rs2228976	0.2	0.2	0.195	0.16234	0.1849	0.3512	0.1297	0.053	0.1155	0.19	0.35	0.16	0.06	0.1666	0.35	0.06	T	0.971	D	0.941	D	0.000	D	0.000	P	3.005	M	-4.02	D	-1.863	T	0.000	T	0.261	5.036	29.8	3.61	2.027	9.378	15.424	5.036398	5.036398	0.01	0.185698	0.079891	ID=COSM149154;OCCURENCE=1(breast),1(stomach)	0.094	NA	16.7961354
86	12	53216989	53216989	G	A	exonic	KRT79	NA	nonsynonymous SNV	KRT79:NM_175834:exon7:c.C1178T:p.A393V	exonic	ENSG00000185640	NA	nonsynonymous SNV	ENSG00000185640:ENST00000330553:exon7:c.C1178T:p.A393V	Score=289;Name=lod=20	NA	12q13.13	NA	NA	NA	NA	rs17688627	0.1	0.1	0.09	0.0720847	0.2147	NA	0.1268	0.0053	0.0511	0.22	NA	0.14	0.01	0.1326	0.22	0	D	0.997	D	0.937	D	0.001	D	0.025	P	2.455	M	-2.38	D	-1.167	T	0.002	T	0.063	2.755	15.17	3.8	2.412	7.742	11.559	2.755149	2.755149	0	0.190698	0.034271	NA	0.036	NA	16.7953354
87	3	132218075	132218075	C	T	exonic	DNAJC13	NA	nonsynonymous SNV	DNAJC13:NM_015268:exon37:c.C4262T:p.A1421V	exonic	ENSG00000138246	NA	nonsynonymous SNV	ENSG00000138246:ENST00000260818:exon37:c.C4262T:p.A1421V	Score=514;Name=lod=164	NA	3q22.1	NA	NA	NA	NA	rs61748102	0.02	0.02	0.015	0.0127796	0.0209	NA	0.0101	0.0242	0.0041	0.02	NA	0.02	0.03	0.0177	0.033	0.01	D	0.998	D	0.803	P	0.000	D	1.000	D	2.56	M	0.65	T	-0.635	T	0.127	T	0.602	5.361	34	5.42	2.706	7.535	19.579	5.360586	5.360586	0	0.018837	0.02542	NA	0.043	NA	16.7758964
88	11	124180359	124180359	A	C	exonic	OR8D1	NA	nonsynonymous SNV	OR8D1:NM_001002917:exon1:c.T304G:p.F102V	exonic	ENSG00000196341	NA	nonsynonymous SNV	ENSG00000196341:ENST00000357821:exon1:c.T304G:p.F102V	Score=371;Name=lod=43	NA	11q24.2	NA	NA	Name=5	NA	rs2510433	0.01	0.01	0.008	0.0105831	0.0219	NA	0.0231	0.0008	0.0143	0.02	NA	0.04	NA	0.017	0.04	0.01	D	0.991	D	0.881	P	0.051	U	0.855	D	3.005	M	7.56	T	-0.816	T	0.001	T	0.161	1.692	11.62	4.29	1.813	4.020	8.849	1.69203	1.69203	0	0.025006	0.004316	NA	0.036	NA	16.7694274
89	4	2906707	2906707	G	T	exonic	ADD1	NA	nonsynonymous SNV	ADD1:NM_001119:exon10:c.G1378T:p.G460W,ADD1:NM_014189:exon10:c.G1378T:p.G460W,ADD1:NM_014190:exon10:c.G1378T:p.G460W,ADD1:NM_176801:exon10:c.G1378T:p.G460W	exonic	ENSG00000087274	NA	nonsynonymous SNV	ENSG00000087274:ENST00000398123:exon9:c.G1378T:p.G460W,ENSG00000087274:ENST00000398129:exon9:c.G1378T:p.G460W,ENSG00000087274:ENST00000264758:exon10:c.G1378T:p.G460W,ENSG00000087274:ENST00000398125:exon10:c.G1378T:p.G460W,ENSG00000087274:ENST00000446856:exon10:c.G1378T:p.G460W,ENSG00000087274:ENST00000503455:exon10:c.G1378T:p.G460W,ENSG00000087274:ENST00000513328:exon10:c.G1378T:p.G460W,ENSG00000087274:ENST00000355842:exon11:c.G1378T:p.G460W	Score=766;Name=lod=1731	NA	4p16.3	NA	NA	NA	NA	rs4961	0.25	0.25	0.238	0.208466	0.2048	0.4524	0.1744	0.0492	0.2004	0.22	0.5	0.18	0.05	0.2019	0.5	0.02	D	1.0	D	1.0	D	0.000	D	0.000	P	1.975	M	2.05	T	-0.946	T	0.000	T	0.633	4.049	20.8	5.55	2.610	6.521	19.496	4.049487	4.049487	0.02	0.195116	0.085565	NA	0.275	CLINSIG=other;CLNDBN=Hypertension\x2c_salt-sensitive_essential\x2c_susceptibility_to;CLNREVSTAT=single;CLNACC=RCV000019936.1;CLNDSDB=.;CLNDSDBID=.	16.7315174
89	13	31221106	31221106	C	T	exonic	USPL1	NA	nonsynonymous SNV	USPL1:NM_005800:exon7:c.C1150T:p.P384S	exonic	ENSG00000132952	NA	nonsynonymous SNV	ENSG00000132952:ENST00000255304:exon7:c.C1150T:p.P384S	Score=547;Name=lod=223	NA	13q12.3	NA	NA	NA	NA	rs3742303	0.03	0.03	0.029	0.0407348	0.0328	0.0585	0.0245	0.0015	0.0951	0.03	0.07	0.03	NA	0.0398	0.07	0	D	0.988	D	0.68	P	0.000	D	0.986	D	2.28	M	0.79	T	-0.967	T	0.024	T	0.222	3.944	20.2	4.72	1.489	1.710	12.920	3.943633	3.943633	0	0.033256	0.006809	NA	0.101	NA	16.7274774
90	2	179650408	179650408	G	A	exonic	TTN	NA	nonsynonymous SNV	TTN:NM_003319:exon14:c.C2294T:p.T765I,TTN:NM_133432:exon14:c.C2294T:p.T765I,TTN:NM_133437:exon14:c.C2294T:p.T765I,TTN:NM_001256850:exon15:c.C2432T:p.T811I,TTN:NM_001267550:exon15:c.C2432T:p.T811I,TTN:NM_133378:exon15:c.C2432T:p.T811I,TTN:NM_133379:exon15:c.C2432T:p.T811I	exonic	ENSG00000155657	NA	nonsynonymous SNV	ENSG00000155657:ENST00000342175:exon14:c.C2294T:p.T765I,ENSG00000155657:ENST00000359218:exon14:c.C2294T:p.T765I,ENSG00000155657:ENST00000460472:exon14:c.C2294T:p.T765I,ENSG00000155657:ENST00000342992:exon15:c.C2432T:p.T811I,ENSG00000155657:ENST00000360870:exon15:c.C2432T:p.T811I,ENSG00000155657:ENST00000589042:exon15:c.C2432T:p.T811I,ENSG00000155657:ENST00000591111:exon15:c.C2432T:p.T811I	Score=570;Name=lod=277	NA	2q31.2	Score=943;Name=V$EGR1_01	Name=Egr-1	NA	NA	rs35813871	0.13	0.13	0.122	0.100439	0.2157	0.001	0.1499	0.0862	0.0685	0.22	NA	0.17	0.12	0.1691	0.23	0	D	0.999	D	0.951	D	.	.	0.062	P	0.895	L	0.25	T	-1.116	T	0.000	T	0.639	2.46	14.19	5.51	2.738	5.619	19.784	2.460217	2.460217	0	0.234535	0.102133	NA	0.13	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=mult|single;CLNACC=RCV000040075.2|RCV000125850.1;CLNDSDB=.|.;CLNDSDBID=.|.	16.7139984
91	19	33490566	33490566	T	C	exonic	RHPN2	NA	nonsynonymous SNV	RHPN2:NM_033103:exon10:c.A1151G:p.Q384R	exonic	ENSG00000131941	NA	nonsynonymous SNV	ENSG00000131941:ENST00000400226:exon9:c.A698G:p.Q233R,ENSG00000131941:ENST00000254260:exon10:c.A1151G:p.Q384R	Score=548;Name=lod=224	NA	19q13.11	Score=884;Name=V$ZID_01	NA	NA	NA	rs74582927	NA	NA	0.11	0.278155	0.2883	0.2401	0.2176	0.3003	0.32	NA	NA	NA	NA	0.3653	NA	0.2	T	1.0	D	0.982	D	0.000	D	1.000	D	2.34	M	2.26	T	-1.024	T	0.112	T	0.724	4.389	23.2	4.72	1.765	7.278	14.205	4.389444	4.389444	0.08	NA	NA	ID=COSM1480906;OCCURENCE=2(breast)	NA	NA	16.6797334
92	11	124294377	124294377	A	G	exonic	OR8B4	NA	nonsynonymous SNV	OR8B4:NM_001005196:exon1:c.T391C:p.Y131H	exonic	ENSG00000198657	NA	nonsynonymous SNV	ENSG00000198657:ENST00000356130:exon1:c.T391C:p.Y131H	Score=389;Name=lod=51	NA	11q24.2	NA	Name=MafK_(ab50322),MafK_(SC-477),MafF_(M8194)	NA	NA	rs4057750	0.25	0.25	0.266	0.259984	0.1978	0.2163	0.1931	0.3843	0.2485	0.2	0.19	0.19	0.43	0.2325	0.43	0.01	D	1.0	D	0.999	D	0.000	D	0.001	P	3.38	M	7.58	T	-0.931	T	0.000	T	0.334	3.53	18.02	4.62	2.073	8.756	14.135	3.530106	3.530106	0.01	0.228309	0.341209	NA	0.341	NA	16.6747244
92	11	124294236	124294236	A	G	exonic	OR8B4	NA	nonsynonymous SNV	OR8B4:NM_001005196:exon1:c.T532C:p.C178R	exonic	ENSG00000198657	NA	nonsynonymous SNV	ENSG00000198657:ENST00000356130:exon1:c.T532C:p.C178R	Score=355;Name=lod=37	NA	11q24.2	Score=887;Name=V$GATA1_02	NA	NA	NA	rs4057749	0.27	0.27	0.281	0.28155	0.1988	0.2163	0.196	0.4637	0.2485	0.2	0.19	0.2	0.51	0.2378	0.51	0.01	D	1.0	D	0.995	D	0.000	D	0.000	P	3.76	H	0.02	T	-0.966	T	0.000	T	0.299	3.011	16.05	4.02	2.070	7.016	13.713	3.011484	3.011484	0.01	0.228658	0.389368	NA	0.355	NA	16.6680754
93	15	91326099	91326099	C	T	exonic	BLM	NA	nonsynonymous SNV	BLM:NM_000057:exon13:c.C2603T:p.P868L	exonic	ENSG00000197299	NA	nonsynonymous SNV	ENSG00000197299:ENST00000355112:exon13:c.C2603T:p.P868L,ENSG00000197299:ENST00000560509:exon13:c.C2603T:p.P868L	Score=593;Name=lod=343	NA	15q26.1	Score=817;Name=V$CEBP_C	NA	NA	NA	rs2227935	0.05	0.05	0.047	0.0513179	0.0736	NA	0.049	0.0749	0.0511	0.07	NA	0.06	0.09	0.0559	0.09	0.02	D	0.81	P	0.342	B	0.000	D	0.000	P	2.395	M	0.66	T	-0.918	T	0.010	T	0.668	3.829	19.45	5.54	2.603	5.647	16.975	3.829246	3.829246	0	0.065263	0.073476	NA	0.029	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000078058.4;CLNDSDB=.;CLNDSDBID=.	16.6385704
94	19	1079959	1079959	G	A	exonic	HMHA1	NA	nonsynonymous SNV	HMHA1:NM_001258328:exon13:c.G1593A:p.M531I,HMHA1:NM_012292:exon13:c.G1545A:p.M515I	exonic	ENSG00000180448	NA	nonsynonymous SNV	ENSG00000180448:ENST00000590577:exon3:c.G450A:p.M150I,ENSG00000180448:ENST00000536472:exon12:c.G1065A:p.M355I,ENSG00000180448:ENST00000543365:exon12:c.G1194A:p.M398I,ENSG00000180448:ENST00000313093:exon13:c.G1545A:p.M515I,ENSG00000180448:ENST00000539243:exon13:c.G1593A:p.M531I,ENSG00000180448:ENST00000586866:exon13:c.G1557A:p.M519I,ENSG00000180448:ENST00000590214:exon13:c.G1626A:p.M542I	Score=573;Name=lod=284	NA	19p13.3	Score=867;Name=V$OCT1_02	Name=USF1_(SC-8983),Rad21,CTCF	Name=6	NA	rs36084354	0.04	0.04	0.039	0.0291534	0.0855	0.0069	0.0548	0.0045	0.0092	0.08	0.01	0.07	0.01	0.0584	0.082	0.29	T	0.649	P	0.21	B	0.000	U	1.000	D	2.045	M	1.0	T	-1.131	T	0.008	T	0.281	3.34	17.24	4.41	2.021	2.741	14.494	3.339832	3.339832	0.24	0.082093	0.018611	ID=COSM438502;OCCURENCE=2(breast)	0.08	NA	16.6073404
95	15	82574879	82574879	T	C	exonic	FAM154B	NA	nonsynonymous SNV	FAM154B:NM_001008226:exon3:c.T673C:p.W225R	exonic	ENSG00000188659	NA	nonsynonymous SNV	ENSG00000188659:ENST00000339465:exon3:c.T673C:p.W225R,ENSG00000188659:ENST00000427381:exon4:c.T628C:p.W210R	Score=300;Name=lod=22	NA	15q25.2	Score=919;Name=V$NFKB_C	Name=NFKB,CTCF	NA	NA	rs11630197	0.21	0.21	0.202	0.234824	0.2873	0.1647	0.17	0.146	0.4192	0.3	0.17	0.19	0.12	0.2535	0.3	0.33	T	1.0	D	0.998	D	0.000	D	0.000	P	2.67	M	2.16	T	-1.009	T	0.000	T	0.548	3.43	17.6	3.9	1.751	6.255	13.153	3.429838	3.429838	0	0.255698	0.167272	NA	0.246	NA	16.5368354
96	1	103379918	103379918	G	A	exonic	COL11A1	NA	nonsynonymous SNV	COL11A1:NM_080630:exon50:c.C3620T:p.P1207L,COL11A1:NM_001190709:exon51:c.C3851T:p.P1284L,COL11A1:NM_001854:exon52:c.C3968T:p.P1323L,COL11A1:NM_080629:exon52:c.C4004T:p.P1335L	exonic	ENSG00000060718	NA	nonsynonymous SNV	ENSG00000060718:ENST00000512756:exon50:c.C3620T:p.P1207L,ENSG00000060718:ENST00000353414:exon51:c.C3851T:p.P1284L,ENSG00000060718:ENST00000358392:exon52:c.C4004T:p.P1335L,ENSG00000060718:ENST00000370096:exon52:c.C3968T:p.P1323L	Score=603;Name=lod=376	Name=Glaucoma (primary open-angle)	1p21.1	NA	NA	NA	NA	rs3753841	0.53	0.53	0.452	0.496605	0.6123	0.7034	0.755	0.0492	0.5859	0.61	0.71	0.73	0.06	0.5916	0.73	0.09	T	0.935	P	0.715	P	0.000	D	0.000	P	2.75	M	-4.09	D	0.969	D	0.915	D	0.527	4.107	21.2	5.75	2.716	9.365	19.960	4.107244	4.107244	0.12	0.611628	0.139582	NA	0.348	NA	16.5178054
96	6	160952838	160952838	G	A	exonic	LPA	NA	nonsynonymous SNV	LPA:NM_005577:exon40:c.C6046T:p.R2016C	exonic	ENSG00000198670	NA	nonsynonymous SNV	ENSG00000198670:ENST00000316300:exon39:c.C6046T:p.R2016C,ENSG00000198670:ENST00000447678:exon40:c.C6046T:p.R2016C	Score=619;Name=lod=437	NA	6q25.3	Score=837;Name=V$AHRARNT_01	NA	NA	NA	rs3124784	0.21	0.21	0.227	0.202676	0.2942	0.1081	0.1398	0.2421	0.1973	0.29	0.11	0.16	0.25	0.2456	0.29	0.1	T	1.0	D	0.994	D	.	.	0.840	P	1.35	L	-2.5	D	0.354	D	0.664	D	0.154	0.61	7.285	3.02	1.412	2.791	13.963	0.609824	NA	0.02	0.276395	0.232864	NA	0.167	NA	16.5171384
97	11	47470345	47470345	G	A	exonic	RAPSN	NA	nonsynonymous SNV	RAPSN:NM_005055:exon1:c.C172T:p.R58C,RAPSN:NM_032645:exon1:c.C172T:p.R58C	exonic	ENSG00000165917	NA	nonsynonymous SNV	ENSG00000165917:ENST00000298854:exon1:c.C172T:p.R58C,ENSG00000165917:ENST00000352508:exon1:c.C172T:p.R58C,ENSG00000165917:ENST00000524487:exon1:c.C172T:p.R58C,ENSG00000165917:ENST00000529341:exon1:c.C172T:p.R58C	Score=546;Name=lod=221	NA	11p11.2	NA	NA	NA	NA	rs34312154	0.06	0.06	0.035	0.0577077	0.1163	0.005	0.1023	0.003	0.0941	0.12	0.01	0.1	0.0041	0.1008	0.12	0.04	D	0.999	D	0.862	P	0.000	D	0.000	P	1.1	L	-1.58	D	-0.705	T	0.019	T	0.359	4.777	26.8	5.45	2.553	5.474	13.34	4.776946	4.776946	0	0.106794	0.02249	NA	0.036	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118118.2;CLNDSDB=.;CLNDSDBID=.	16.5094394
98	17	45214558	45214558	G	A	exonic	CDC27	NA	stopgain	CDC27:NM_001114091:exon14:c.C1891T:p.R631X,CDC27:NM_001256:exon14:c.C1873T:p.R625X	exonic	ENSG00000004897	NA	stopgain	ENSG00000004897:ENST00000446365:exon13:c.C1690T:p.R564X,ENSG00000004897:ENST00000066544:exon14:c.C1873T:p.R625X,ENSG00000004897:ENST00000527547:exon14:c.C1870T:p.R624X,ENSG00000004897:ENST00000531206:exon14:c.C1891T:p.R631X	Score=658;Name=lod=631	NA	17q21.32	Score=917;Name=V$FOXO4_01	Name=STAT1,CTCF,TAF1,CTCFL_(SC-98982),GABP,SUZ12,IRF3,ZNF274,EBF,ZZZ3,YY1,c-Jun,GATA-2,c-Fos	Name=148	NA	rs77685276	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4968	NA	1	T	.	.	.	.	0.000	D	1.000	A	.	.	.	.	.	.	.	.	.	7.519	39	4.79	2.761	2.041	10.719	7.518532	7.518532	1	NA	NA	NA	NA	NA	16.5032
99	5	40841741	40841741	C	T	exonic	CARD6	NA	nonsynonymous SNV	CARD6:NM_032587:exon1:c.C257T:p.S86L	exonic	ENSG00000132357	NA	nonsynonymous SNV	ENSG00000132357:ENST00000254691:exon1:c.C257T:p.S86L,ENSG00000132357:ENST00000381677:exon1:c.C257T:p.S86L	Score=309;Name=lod=24	NA	5p13.1	Score=831;Name=V$CEBP_C	Name=YY1,Pol2,MafK_(SC-477),TAF1,MafF_(M8194),FOXA1_(C-20),p300,CTCF,GTF2F1_(RAP-74),TBP,HEY1,FOXA2_(SC-6554),FOXA1_(SC-101058),MafK_(ab50322)	Name=105	NA	rs10512747	0.06	0.06	0.058	0.048123	0.1272	0.005	0.0605	0.0068	0.0583	0.13	0.0017	0.07	0.01	0.0913	0.13	0	D	0.989	D	0.845	P	0.135	N	0.677	P	1.935	M	2.76	T	-1.091	T	0.001	T	0.363	3.841	19.51	4.01	1.275	0.479	8.544	3.840641	3.840641	0	0.120465	0.024512	NA	0.072	NA	16.4943684
100	5	118811533	118811533	G	A	exonic	HSD17B4	NA	nonsynonymous SNV	HSD17B4:NM_001199292:exon5:c.G263A:p.R88H,HSD17B4:NM_000414:exon6:c.G317A:p.R106H,HSD17B4:NM_001199291:exon7:c.G392A:p.R131H	exonic	ENSG00000133835	NA	nonsynonymous SNV	ENSG00000133835:ENST00000515320:exon5:c.G263A:p.R88H,ENSG00000133835:ENST00000256216:exon6:c.G317A:p.R106H,ENSG00000133835:ENST00000442060:exon6:c.G317A:p.R106H,ENSG00000133835:ENST00000504811:exon7:c.G392A:p.R131H,ENSG00000133835:ENST00000510025:exon7:c.G245A:p.R82H	Score=592;Name=lod=340	NA	5q23.1	Score=887;Name=V$HSF1_01	NA	NA	NA	rs25640	0.4	0.4	0.36	0.36262	0.4493	0.5069	0.5086	0.1097	0.363	0.47	0.48	0.5	0.12	0.44	0.5	0.02	D	0.996	D	0.687	P	0.000	D	0.000	P	0.6	N	-2.29	D	-0.975	T	0.000	T	0.647	4.38	23.1	5.67	2.676	7.633	19.358	4.380296	4.380296	0.01	0.459981	0.176203	ID=COSM1432658;OCCURENCE=1(large_intestine)	0.239	CLINSIG=pathogenic;CLNDBN=Bifunctional_peroxisomal_enzyme_deficiency;CLNREVSTAT=single;CLNACC=RCV000008096.1;CLNDSDB=MedGen:OMIM:SNOMED_CT;CLNDSDBID=C0342870:261515:238068007	16.4840524
100	10	115410234	115410234	T	C	exonic	NRAP	NA	nonsynonymous SNV	NRAP:NM_001261463:exon8:c.A746G:p.Y249C,NRAP:NM_006175:exon8:c.A746G:p.Y249C,NRAP:NM_198060:exon8:c.A746G:p.Y249C	exonic	ENSG00000197893	NA	nonsynonymous SNV	ENSG00000197893:ENST00000359988:exon8:c.A746G:p.Y249C,ENSG00000197893:ENST00000360478:exon8:c.A746G:p.Y249C,ENSG00000197893:ENST00000369358:exon8:c.A746G:p.Y249C,ENSG00000197893:ENST00000369360:exon8:c.A746G:p.Y249C	Score=519;Name=lod=171	NA	10q25.3	Score=885;Name=V$GATA1_04	NA	NA	NA	rs2185913	0.24	0.24	0.231	0.203474	0.3012	0.3343	0.245	0.0182	0.1892	0.29	0.35	0.28	0.03	0.2598	0.35	0.02	D	1.0	D	1.0	D	0.000	D	0.000	P	2.44	M	2.32	T	-1.062	T	0.000	T	0.478	4.513	24.3	6.17	2.371	7.283	16.822	4.512888	4.512888	0.02	0.292093	0.058103	ID=COSM147049;OCCURENCE=1(stomach)	0.174	NA	16.4802404
101	1	9324213	9324213	C	T	exonic	H6PD	NA	nonsynonymous SNV	H6PD:NM_004285:exon5:c.C1661T:p.P554L	exonic	ENSG00000049239	NA	nonsynonymous SNV	ENSG00000049239:ENST00000377403:exon5:c.C1661T:p.P554L,ENSG00000049239:ENST00000602477:exon5:c.C1694T:p.P565L	Score=304;Name=lod=23	NA	1p36.22	Score=979;Name=V$AP2REP_01	NA	NA	NA	rs17368528	0.08	0.08	0.06	0.096845	0.1302	0.0685	0.1138	0.0053	0.2035	0.13	0.07	0.12	0.01	0.1185	0.13	0.02	D	0.913	P	0.208	B	0.001	D	0.000	P	2.075	M	-4.76	D	-0.514	T	0.077	T	0.183	2.424	14.06	4.76	2.677	1.817	13.147	2.423691	2.423691	NA	0.122615	0.022727	NA	0.094	NA	16.4620184
102	11	5510688	5510688	T	C	exonic	OR52D1	NA	nonsynonymous SNV	OR52D1:NM_001005163:exon1:c.T752C:p.I251T	exonic	ENSG00000181609	NA	nonsynonymous SNV	ENSG00000181609:ENST00000322641:exon1:c.T752C:p.I251T	Score=278;Name=lod=18	NA	11p15.4	NA	Name=Pol2(b)	NA	NA	rs7101919	0.18	0.18	0.165	0.154353	0.3111	0.0397	0.2767	0.0567	0.1564	0.31	0.05	0.27	0.09	0.2611	0.32	0	D	1.0	D	0.99	D	0.000	D	0.000	P	3.255	M	8.52	T	-0.783	T	0.000	T	0.231	3.455	17.7	5.58	2.343	2.095	14.723	3.454892	3.454892	0	0.321969	0.096547	NA	0.275	NA	16.4391644
103	1	226019633	226019633	T	C	exonic	EPHX1	NA	nonsynonymous SNV	EPHX1:NM_000120:exon3:c.T337C:p.Y113H,EPHX1:NM_001136018:exon3:c.T337C:p.Y113H	exonic	ENSG00000143819	NA	nonsynonymous SNV	ENSG00000143819:ENST00000272167:exon3:c.T337C:p.Y113H,ENSG00000143819:ENST00000366837:exon3:c.T337C:p.Y113H,ENSG00000143819:ENST00000445856:exon3:c.T337C:p.Y113H,ENSG00000143819:ENST00000448202:exon3:c.T337C:p.Y113H	Score=468;Name=lod=106	NA	1q42.12	NA	NA	NA	NA	rs1051740	0.32	0.32	0.287	0.313299	0.3042	0.4821	0.3199	0.1407	0.3773	0.3	0.45	0.33	0.16	0.3134	0.45	0	D	0.998	D	0.986	D	0.000	D	0.000	P	2.185	M	3.7	T	-0.886	T	0.000	T	0.678	4.99	29.3	5.58	2.136	7.809	15.758	4.990224	4.990224	0	0.299651	0.176123	NA	0.326	CLINSIG=other|other|other|other;CLNDBN=Lymphoproliferative_disorders\x2c_susceptibility_to|Preeclampsia\x2c_susceptibility_to|Emphysema\x2c_susceptibility_to|Pulmonary_disease\x2c_chronic_obstructive\x2c_susceptibility_to;CLNREVSTAT=single|single|single|single;CLNACC=RCV000018075.1|RCV000018076.1|RCV000018077.1|RCV000018078.1;CLNDSDB=.|.|.|.;CLNDSDBID=.|.|.|.	16.4160824
104	16	71683718	71683718	A	G	exonic	PHLPP2	NA	nonsynonymous SNV	PHLPP2:NM_015020:exon18:c.T3047C:p.L1016S	exonic	ENSG00000040199	NA	nonsynonymous SNV	ENSG00000040199:ENST00000393524:exon17:c.T2846C:p.L949S,ENSG00000040199:ENST00000356272:exon18:c.T3047C:p.L1016S,ENSG00000040199:ENST00000567016:exon19:c.T3152C:p.L1051S,ENSG00000040199:ENST00000568954:exon19:c.T3047C:p.L1016S	Score=547;Name=lod=223	NA	16q22.2	NA	NA	NA	Score=92;Name=928795_0_+_92	rs61733127	0.1	0.1	0.08	0.086861	0.1481	0.0665	0.0634	0.028	0.1411	0.16	0.07	0.09	0.02	0.1214	0.16	0.02	D	0.975	D	0.853	P	0.000	D	0.000	P	2.99	M	2.28	T	-1.146	T	0.001	T	0.879	3.826	19.43	5.9	2.251	9.339	15.513	3.826151	3.826151	0.02	0.149884	0.045723	NA	0.051	NA	16.4139494
105	17	34077232	34077232	G	A	exonic	GAS2L2	NA	nonsynonymous SNV	GAS2L2:NM_139285:exon2:c.C491T:p.A164V	exonic	ENSG00000132139	NA	nonsynonymous SNV	ENSG00000132139:ENST00000254466:exon2:c.C491T:p.A164V,ENSG00000132139:ENST00000587565:exon2:c.C491T:p.A164V	Score=550;Name=lod=229	NA	17q12	Score=769;Name=V$PAX5_01	Name=Egr-1,ZBTB7A_(SC-34508),E2F6_(H-50),ELF1_(SC-631)	Name=42	NA	rs11654604	0.16	0.16	0.13	0.143371	0.162	0.1567	0.2046	0.1014	0.1237	0.18	0.14	0.2	0.12	0.156	0.2	0.4	T	0.998	D	0.773	P	0.318	N	0.584	P	1.95	M	0.98	T	-1.087	T	0.000	T	0.191	2.583	14.6	5.11	2.370	1.608	12.733	2.583429	2.583429	0.04	0.14736	0.108715	NA	0.196	NA	16.3679734
106	9	8465666	8465666	C	G	exonic	PTPRD	NA	nonsynonymous SNV	PTPRD:NM_001171025:exon14:c.G2251C:p.E751Q,PTPRD:NM_001040712:exon15:c.G2272C:p.E758Q,PTPRD:NM_130393:exon15:c.G2266C:p.E756Q,PTPRD:NM_130391:exon16:c.G2281C:p.E761Q,PTPRD:NM_130392:exon16:c.G2281C:p.E761Q,PTPRD:NM_002839:exon32:c.G3514C:p.E1172Q	exonic	ENSG00000153707	NA	nonsynonymous SNV	ENSG00000153707:ENST00000397606:exon14:c.G2251C:p.E751Q,ENSG00000153707:ENST00000397617:exon14:c.G2251C:p.E751Q,ENSG00000153707:ENST00000537002:exon14:c.G2272C:p.E758Q,ENSG00000153707:ENST00000397611:exon15:c.G2272C:p.E758Q,ENSG00000153707:ENST00000355233:exon16:c.G2281C:p.E761Q,ENSG00000153707:ENST00000486161:exon16:c.G2281C:p.E761Q,ENSG00000153707:ENST00000358503:exon17:c.G3448C:p.E1150Q,ENSG00000153707:ENST00000360074:exon18:c.G3475C:p.E1159Q,ENSG00000153707:ENST00000356435:exon21:c.G3514C:p.E1172Q,ENSG00000153707:ENST00000540109:exon21:c.G3514C:p.E1172Q,ENSG00000153707:ENST00000381196:exon29:c.G3514C:p.E1172Q	Score=616;Name=lod=425	NA	9p24.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	.	.	0.981	D	0.932	D	0.000	D	1.000	D	1.78	L	0.91	T	-0.619	T	0.306	T	0.782	4.144	21.4	5.5	2.746	7.445	19.757	4.144176	4.144176	0.25	NA	NA	NA	NA	NA	16.3333334
106	17	21217513	21217513	G	A	exonic	MAP2K3	NA	nonsynonymous SNV	MAP2K3:NM_002756:exon12:c.G928A:p.V310M,MAP2K3:NM_145109:exon12:c.G1015A:p.V339M	exonic	ENSG00000034152	NA	nonsynonymous SNV	ENSG00000034152:ENST00000342679:exon12:c.G1015A:p.V339M,ENSG00000034152:ENST00000361818:exon12:c.G928A:p.V310M,ENSG00000034152:ENST00000316920:exon13:c.G928A:p.V310M	Score=522;Name=lod=177	NA	17p11.2	Score=747;Name=V$STAT5A_02	NA	NA	NA	rs2363198	0.49	0.49	NA	NA	NA	NA	NA	NA	NA	0.49	0.49	0.5	0.5	0.5	0.5	0	D	0.997	D	0.789	P	0.000	D	1.000	D	1.655	L	-0.77	T	-0.986	T	0.000	T	0.308	3.586	18.26	3.94	1.057	7.174	10.666	3.58578	3.58578	0	NA	NA	NA	0.42	NA	16.3333334
106	19	9296702	9296702	T	C	exonic	OR7D2	NA	nonsynonymous SNV	OR7D2:NM_175883:exon1:c.T245C:p.L82P	exonic	ENSG00000188000	NA	nonsynonymous SNV	ENSG00000188000:ENST00000344248:exon1:c.T245C:p.L82P	NA	NA	19p13.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	D	0.999	D	0.967	D	0.007	U	0.992	D	4.13	H	7.41	T	-1.048	T	0.006	T	0.809	2.851	15.5	2.21	1.296	6.633	9.517	2.85105	2.85105	0	NA	NA	NA	NA	NA	16.3333334
106	6	35258481	35258481	G	T	exonic	ZNF76	NA	nonsynonymous SNV	ZNF76:NM_003427:exon7:c.G613T:p.A205S	exonic	ENSG00000065029	NA	nonsynonymous SNV	ENSG00000065029:ENST00000440666:exon6:c.G535T:p.A179S,ENSG00000065029:ENST00000339411:exon7:c.G613T:p.A205S,ENSG00000065029:ENST00000373953:exon7:c.G613T:p.A205S,ENSG00000065029:ENST00000469195:exon7:c.G613T:p.A205S	Score=589;Name=lod=329	NA	6p21.31	Score=960;Name=V$CEBP_01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000008238	NA	0.4	T	0.956	P	0.622	P	0.000	D	0.962	D	1.01	L	1.28	T	-1.145	T	0.056	T	0.309	3.213	16.76	5.36	2.797	5.944	13.575	3.212611	3.212611	0.18	NA	NA	NA	NA	NA	16.3333252
106	5	140209598	140209598	A	T	exonic	PCDHA6	NA	nonsynonymous SNV	PCDHA6:NM_018909:exon1:c.A1922T:p.D641V,PCDHA6:NM_031848:exon1:c.A1922T:p.D641V	exonic	ENSG00000081842	NA	nonsynonymous SNV	ENSG00000081842:ENST00000529310:exon1:c.A1922T:p.D641V	Score=259;Name=lod=15	NA	5q31.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00002487	NA	0	D	0.998	D	0.96	D	0.002	U	1.000	D	2.035	M	0.74	T	-0.681	T	0.236	T	0.612	1.748	11.8	2.8	0.692	8.187	9.474	1.747703	1.747703	0	NA	NA	NA	NA	NA	16.3333085
106	14	39868794	39868794	C	T	exonic	FBXO33	NA	nonsynonymous SNV	FBXO33:NM_203301:exon4:c.G1594A:p.E532K	exonic	ENSG00000165355	NA	nonsynonymous SNV	ENSG00000165355:ENST00000298097:exon4:c.G1594A:p.E532K	Score=654;Name=lod=609	NA	14q21.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00003489	NA	.	.	0.999	D	0.972	D	0.000	D	1.000	D	0.345	N	0.89	T	-0.935	T	0.153	T	0.653	2.384	13.93	5.85	2.767	4.383	20.154	2.384205	2.384205	0	NA	NA	NA	NA	NA	16.3332985
106	6	155606327	155606327	T	C	exonic	TFB1M	NA	nonsynonymous SNV	TFB1M:NM_016020:exon5:c.A631G:p.T211A	exonic	ENSG00000029639	NA	nonsynonymous SNV	ENSG00000029639:ENST00000367166:exon5:c.A631G:p.T211A	Score=336;Name=lod=31	NA	6q25.3	Score=752;Name=V$STAT3_01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00009887	NA	0.74	T	0.372	B	0.216	B	0.001	D	0.999	D	2.045	M	1.58	T	-1.100	T	0.042	T	0.431	1.667	11.53	5.9	2.254	2.609	12.174	1.666688	1.666688	0.94	NA	NA	NA	NA	NA	16.3332345
106	18	21104425	21104425	A	G	exonic	C18orf8	NA	nonsynonymous SNV	C18orf8:NM_001276342:exon10:c.A895G:p.I299V,C18orf8:NM_013326:exon12:c.A1039G:p.I347V	exonic	ENSG00000141452	NA	nonsynonymous SNV	ENSG00000141452:ENST00000590868:exon10:c.A895G:p.I299V,ENSG00000141452:ENST00000269221:exon12:c.A1039G:p.I347V	Score=525;Name=lod=182	NA	18q11.2	NA	NA	NA	NA	rs147982431	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0002	0.001	0.22	T	0.994	D	0.978	D	0.000	D	1.000	D	2.14	M	.	.	-0.304	T	0.408	T	0.526	4.538	24.5	5.4	2.032	8.857	15.412	4.538377	4.538377	0	0.001047	0	NA	NA	NA	16.3320864
106	3	57303603	57303603	C	G	exonic	APPL1	NA	nonsynonymous SNV	APPL1:NM_012096:exon22:c.C2018G:p.S673C	exonic	ENSG00000157500	NA	nonsynonymous SNV	ENSG00000157500:ENST00000288266:exon22:c.C2018G:p.S673C	Score=689;Name=lod=844	NA	3p14.3	NA	NA	NA	NA	rs138485817	0.0005	0.0005	NA	0.000199681	NA	NA	0.0014	NA	NA	NA	NA	0.0028	NA	0.0006	0.0028	0.02	D	0.999	D	0.99	D	0.000	D	1.000	D	0.975	L	2.74	T	-1.150	T	0.076	T	0.587	2.898	15.66	5.65	2.817	7.436	20.078	2.897885	2.897885	0.01	0.001977	0	NA	NA	NA	16.3307564
106	13	46538118	46538118	G	T	exonic	ZC3H13	NA	nonsynonymous SNV	ZC3H13:NM_015070:exon17:c.C4534A:p.P1512T	exonic	ENSG00000123200	NA	nonsynonymous SNV	ENSG00000123200:ENST00000378921:exon4:c.C1399A:p.P467T,ENSG00000123200:ENST00000242848:exon17:c.C4531A:p.P1511T,ENSG00000123200:ENST00000282007:exon17:c.C4534A:p.P1512T	Score=635;Name=lod=507	NA	13q14.13	NA	NA	NA	NA	rs143461574	0.0009	0.0009	NA	0.000399361	0.002	NA	NA	NA	NA	0.0026	NA	NA	NA	0.0007	0.0026	0	D	1.0	D	0.999	D	0.000	D	1.000	D	1.7	L	2.3	T	-0.557	T	0.286	T	0.695	3.7	18.8	5.73	2.713	5.284	19.898	3.70006	3.70006	0	0.000465	0	NA	NA	NA	16.3301684
106	2	101643904	101643904	C	G	exonic	TBC1D8	NA	nonsynonymous SNV	TBC1D8:NM_001102426:exon15:c.G2416C:p.V806L	exonic	ENSG00000204634	NA	nonsynonymous SNV	ENSG00000204634:ENST00000376840:exon15:c.G2416C:p.V806L,ENSG00000204634:ENST00000409318:exon15:c.G2461C:p.V821L	Score=295;Name=lod=21	NA	2q11.2	Score=759;Name=V$STAT3_01	NA	NA	NA	rs201720097	0.0009	0.0009	NA	0.000599042	0.002	NA	NA	NA	0.001	0.0026	NA	NA	NA	0.0007	0.0026	0.81	T	1.0	D	0.998	D	0.000	D	0.945	D	1.78	L	0.82	T	-0.787	T	0.238	T	0.511	3.891	19.78	5.18	2.554	3.810	17.238	3.891088	3.891088	0.01	0.000484	0	NA	NA	NA	16.3301494
106	4	70361182	70361182	T	C	exonic	UGT2B4	NA	nonsynonymous SNV	UGT2B4:NM_021139:exon1:c.A398G:p.N133S	exonic	ENSG00000156096	NA	nonsynonymous SNV	ENSG00000156096:ENST00000305107:exon1:c.A398G:p.N133S,ENSG00000156096:ENST00000512583:exon1:c.A398G:p.N133S	Score=272;Name=lod=17	NA	4q13.2	NA	NA	NA	NA	rs181603790	0.0014	0.0014	NA	0.000998403	NA	NA	0.0058	0.0008	NA	NA	NA	0.01	NA	0.0016	0.01	0.05	D	1.0	D	0.999	D	0.003	U	0.999	D	2.305	M	-0.06	T	-0.445	T	0.293	T	0.038	1.7	11.64	2.4	1.101	3.264	8.360	1.699937	1.699937	0.03	0.002234	0.00048	NA	NA	NA	16.3294994
106	6	132061420	132061420	G	A	exonic	ENPP3	NA	nonsynonymous SNV	ENPP3:NM_005021:exon24:c.G2357A:p.S786N	exonic	ENSG00000154269	NA	nonsynonymous SNV	ENSG00000154269:ENST00000357639:exon24:c.G2357A:p.S786N,ENSG00000154269:ENST00000414305:exon25:c.G2357A:p.S786N	Score=295;Name=lod=21	NA	6q23.2	NA	NA	Name=37	NA	rs17601580	0.1	0.1	0.092	0.0892572	0.1998	0.0129	0.0879	0.0106	0.1616	0.21	0.01	0.11	0.02	0.142	0.21	0.03	D	0.965	D	0.819	P	0.000	D	0.000	P	2.61	M	-0.48	T	-0.024	T	0.479	T	0.143	4.528	24.4	5.45	2.716	8.015	19.663	4.527897	4.527897	0.01	0.16314	0.028597	NA	0.116	NA	16.3283934
106	13	53049198	53049198	G	C	exonic	CKAP2	NA	nonsynonymous SNV	CKAP2:NM_001098525:exon9:c.G1974C:p.L658F,CKAP2:NM_018204:exon9:c.G1971C:p.L657F	exonic	ENSG00000136108	NA	nonsynonymous SNV	ENSG00000136108:ENST00000258607:exon9:c.G1971C:p.L657F,ENSG00000136108:ENST00000378037:exon9:c.G1974C:p.L658F,ENSG00000136108:ENST00000490903:exon9:c.G1827C:p.L609F	Score=340;Name=lod=32	NA	13q14.3	Score=947;Name=V$LYF1_01	NA	NA	NA	rs34624748	0	0	NA	0.000199681	0.001	NA	NA	NA	NA	NA	NA	NA	NA	0.002	0.002	0.01	D	1.0	D	0.996	D	0.000	D	1.000	D	2.485	M	1.69	T	-0.804	T	0.159	T	0.574	3.047	16.17	3.86	0.607	0.748	9.738	3.047053	3.047053	0	0.001977	0	NA	NA	NA	16.3283564
106	9	94486381	94486381	G	A	exonic	ROR2	NA	nonsynonymous SNV	ROR2:NM_004560:exon9:c.C2395T:p.P799S	exonic	ENSG00000169071	NA	nonsynonymous SNV	ENSG00000169071:ENST00000375708:exon9:c.C2395T:p.P799S	Score=563;Name=lod=260	NA	9q22.31	Score=824;Name=V$CEBP_C	NA	NA	NA	rs141235720	NA	NA	NA	0.000399361	0.001	NA	NA	0.0008	NA	NA	NA	NA	NA	0.0021	0.0034	0.33	T	1.0	D	0.996	D	0.001	D	1.000	D	0.805	L	-1.13	T	-0.210	T	0.474	T	0.467	2.77	15.22	4.65	2.415	4.347	17.751	2.770186	2.770186	0.19	0.003372	0.000908	ID=COSM48755;OCCURENCE=1(lung),1(large_intestine)	NA	NA	16.3268614
107	9	134308126	134308126	G	A	exonic	PRRC2B	NA	nonsynonymous SNV	PRRC2B:NM_013318:exon2:c.G238A:p.V80I	exonic	ENSG00000130723	NA	nonsynonymous SNV	ENSG00000130723:ENST00000357304:exon2:c.G238A:p.V80I,ENSG00000130723:ENST00000458550:exon2:c.G238A:p.V80I,ENSG00000130723:ENST00000405995:exon3:c.G238A:p.V80I	Score=720;Name=lod=1122	NA	9q34.13	NA	NA	NA	NA	rs41302675	0.0018	0.0018	0	0.00139776	0.003	NA	0.0043	NA	0.001	0.004	NA	0.0028	NA	0.0038	0.004	0.02	D	0.997	D	0.992	D	0.002	U	1.000	D	2.7	M	1.08	T	-0.418	T	0.323	T	0.589	5.537	35	6.03	2.861	9.476	19.545	5.537088	5.537088	0	0.002959	0.001207	NA	NA	NA	16.3235744
107	11	62295149	62295149	T	G	exonic	AHNAK	NA	nonsynonymous SNV	AHNAK:NM_001620:exon5:c.A6740C:p.K2247T	exonic	ENSG00000124942	NA	nonsynonymous SNV	ENSG00000124942:ENST00000378024:exon5:c.A6740C:p.K2247T	Score=547;Name=lod=223	NA	11q12.3	NA	NA	NA	NA	rs61524789	0.03	0.03	0.042	0.0295527	0.002	NA	0.0101	0.1051	NA	0.0026	NA	0.01	0.14	0.0082	0.14	0.03	D	0.997	D	0.99	D	0.001	U	1.000	D	3.675	H	2.71	T	-1.128	T	0.001	T	0.133	3.039	16.14	3.38	1.546	5.886	12.011	3.038892	3.038892	0.28	0.000349	0.085831	NA	0.036	NA	16.3227844
107	16	89620328	89620328	G	A	exonic	SPG7	NA	nonsynonymous SNV	SPG7:NM_003119:exon15:c.G2063A:p.R688Q	exonic	ENSG00000197912	NA	nonsynonymous SNV	ENSG00000197912:ENST00000268704:exon15:c.G2063A:p.R688Q	Score=509;Name=lod=156	NA	16q24.3	Score=809;Name=V$PAX4_01	Name=c-Myc	NA	NA	rs12960	0.12	0.12	0.099	0.105831	0.166	0.131	0.1124	0.0098	0.1431	0.17	0.13	0.12	0.02	0.1509	0.19	0.42	T	0.818	P	0.258	B	0.000	D	0.000	P	0.505	N	-1.69	D	-1.051	T	0.001	T	0.289	4.264	22.2	5.21	2.423	9.423	17.776	4.264034	4.264034	0.05	0.193882	0.037534	NA	0.087	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118410.2;CLNDSDB=.;CLNDSDBID=.	16.3225514
107	5	140362125	140362125	C	G	exonic	PCDHA1,PCDHA10,PCDHA11,PCDHA12,PCDHA13,PCDHA2,PCDHA3,PCDHA4,PCDHA5,PCDHA6,PCDHA7,PCDHA8,PCDHA9,PCDHAC1,PCDHAC2	NA	nonsynonymous SNV	PCDHAC1:NM_018898:exon3:c.C2558G:p.P853R,PCDHAC2:NM_018899:exon3:c.C2690G:p.P897R,PCDHA1:NM_018900:exon3:c.C2519G:p.P840R,PCDHA10:NM_018901:exon3:c.C2513G:p.P838R,PCDHA11:NM_018902:exon3:c.C2516G:p.P839R,PCDHA12:NM_018903:exon3:c.C2492G:p.P831R,PCDHA13:NM_018904:exon3:c.C2519G:p.P840R,PCDHA2:NM_018905:exon3:c.C2513G:p.P838R,PCDHA3:NM_018906:exon3:c.C2519G:p.P840R,PCDHA4:NM_018907:exon3:c.C2510G:p.P837R,PCDHA5:NM_018908:exon3:c.C2477G:p.P826R,PCDHA6:NM_018909:exon3:c.C2519G:p.P840R,PCDHA7:NM_018910:exon3:c.C2480G:p.P827R,PCDHA8:NM_018911:exon3:c.C2519G:p.P840R,PCDHA1:NM_031411:exon3:c.C1727G:p.P576R,PCDHA6:NM_031849:exon3:c.C1727G:p.P576R,PCDHA9:NM_031857:exon3:c.C2519G:p.P840R,PCDHA10:NM_031860:exon3:c.C1724G:p.P575R	exonic	ENSG00000081842,ENSG00000204961,ENSG00000204962,ENSG00000204963,ENSG00000204965,ENSG00000204967,ENSG00000204969,ENSG00000204970,ENSG00000239389,ENSG00000243232,ENSG00000248383,ENSG00000249158,ENSG00000250120,ENSG00000251664,ENSG00000255408	NA	nonsynonymous SNV	ENSG00000248383:ENST00000253807:exon3:c.C2558G:p.P853R,ENSG00000243232:ENST00000289269:exon3:c.C2690G:p.P897R,ENSG00000239389:ENST00000289272:exon3:c.C2519G:p.P840R,ENSG00000250120:ENST00000307360:exon3:c.C2513G:p.P838R,ENSG00000204970:ENST00000394633:exon3:c.C1727G:p.P576R,ENSG00000251664:ENST00000398631:exon3:c.C2492G:p.P831R,ENSG00000249158:ENST00000398640:exon3:c.C2516G:p.P839R,ENSG00000239389:ENST00000409494:exon3:c.C2519G:p.P840R,ENSG00000204970:ENST00000504120:exon3:c.C2519G:p.P840R,ENSG00000250120:ENST00000506939:exon3:c.C1724G:p.P575R,ENSG00000204967:ENST00000512229:exon3:c.C2510G:p.P837R,ENSG00000255408:ENST00000522353:exon3:c.C2519G:p.P840R,ENSG00000204963:ENST00000525929:exon3:c.C2480G:p.P827R,ENSG00000204969:ENST00000526136:exon3:c.C2513G:p.P838R,ENSG00000081842:ENST00000527624:exon3:c.C1727G:p.P576R,ENSG00000081842:ENST00000529310:exon3:c.C2519G:p.P840R,ENSG00000204965:ENST00000529619:exon3:c.C2477G:p.P826R,ENSG00000204965:ENST00000529859:exon3:c.C2477G:p.P826R,ENSG00000204967:ENST00000530339:exon3:c.C2510G:p.P837R,ENSG00000204962:ENST00000531613:exon3:c.C2519G:p.P840R,ENSG00000204961:ENST00000532602:exon3:c.C2519G:p.P840R	Score=608;Name=lod=396	NA	5q31.3	NA	Name=POU2F2,Pbx3,PU.1,Oct-2	NA	NA	rs79247475	0.0023	0.0023	NA	0.00159744	0.005	NA	NA	NA	0.0031	0.01	NA	NA	NA	0.0055	0.011	0.08	T	1.0	D	0.998	D	0.001	D	1.000	D	1.845	L	0.78	T	-0.605	T	0.247	T	0.913	4.546	24.6	5.9	2.802	4.950	17.179	4.545576	4.545576	0	0.004302	0.000454	NA	0.007	NA	16.3185314
107	2	242742842	242742842	A	G	exonic	GAL3ST2	NA	nonsynonymous SNV	GAL3ST2:NM_022134:exon4:c.A458G:p.Y153C	exonic	ENSG00000154252	NA	nonsynonymous SNV	ENSG00000154252:ENST00000192314:exon4:c.A458G:p.Y153C	Score=340;Name=lod=32	NA	2q37.3	NA	Name=Egr-1	NA	NA	rs139344622	0.0005	0.0005	NA	0.00119808	0.003	NA	0.0029	NA	0.001	NA	NA	0.0028	NA	0.0051	0.008	0	D	1.0	D	0.988	D	0.011	N	0.877	N	3.46	M	1.7	T	-0.689	T	0.166	T	0.872	3.283	17.02	3.83	1.737	5.339	13.089	3.28302	3.28302	0	0.008025	0.001589	NA	0.007	NA	16.3172084
107	20	31756954	31756954	G	A	exonic	BPIFA2	NA	nonsynonymous SNV	BPIFA2:NM_080574:exon2:c.G3A:p.M1I	exonic	ENSG00000131050	NA	nonsynonymous SNV	ENSG00000131050:ENST00000253362:exon2:c.G3A:p.M1I,ENSG00000131050:ENST00000354932:exon2:c.G3A:p.M1I	Score=383;Name=lod=48	NA	20q11.21	NA	Name=CTCF	NA	NA	rs17124277	0.03	0.03	0.034	0.0279553	0.005	NA	0.0058	0.0991	NA	0.01	NA	0.01	0.11	0.0099	0.11	0	D	1.0	D	0.994	D	0.000	D	0.000	P	.	.	1.4	T	-0.981	T	0.006	T	0.411	3.615	18.4	4.22	2.633	3.596	12.378	3.615032	3.615032	0	0.001977	0.090785	NA	0.029	NA	16.3164564
108	20	51871502	51871502	G	A	exonic	TSHZ2	NA	nonsynonymous SNV	TSHZ2:NM_001193421:exon2:c.G1496A:p.R499K,TSHZ2:NM_173485:exon2:c.G1505A:p.R502K	exonic	ENSG00000182463	NA	nonsynonymous SNV	ENSG00000182463:ENST00000329613:exon2:c.G1496A:p.R499K,ENSG00000182463:ENST00000371497:exon2:c.G1505A:p.R502K,ENSG00000182463:ENST00000603338:exon2:c.G1496A:p.R499K	Score=488;Name=lod=128	NA	20q13.2	NA	NA	NA	NA	rs45479792	0.0041	0.0041	NA	0.00299521	0.008	NA	0.0072	0.0008	0.001	0.01	NA	0.01	0.002	0.0066	0.01	0.11	T	0.994	D	0.97	D	0.000	D	1.000	D	2.31	M	1.6	T	-0.800	T	0.148	T	0.581	3.908	19.87	4.98	1.482	7.604	17.083	3.907598	3.907598	0.02	0.007558	0.002043	NA	NA	NA	16.3111754
108	10	101591737	101591737	T	C	exonic	ABCC2	NA	nonsynonymous SNV	ABCC2:NM_000392:exon23:c.T3107C:p.I1036T	exonic	ENSG00000023839	NA	nonsynonymous SNV	ENSG00000023839:ENST00000370449:exon23:c.T3107C:p.I1036T	NA	NA	10q24.2	NA	NA	NA	NA	rs45441199	0.0027	0.0027	0.002	0.00219649	0.0099	NA	0.0014	NA	NA	0.01	NA	0.0028	NA	0.0053	0.01	0.03	D	0.316	B	0.232	B	0.510	N	1.000	D	1.985	M	-3.61	D	0.452	D	0.762	D	0.316	2.093	12.96	5.64	2.149	2.195	15.833	2.093462	2.093462	0.04	0.008721	0.001362	NA	0.014	NA	16.3094124
108	10	43318589	43318589	A	C	exonic	BMS1	NA	nonsynonymous SNV	BMS1:NM_014753:exon20:c.A3156C:p.E1052D	exonic	ENSG00000165733	NA	nonsynonymous SNV	ENSG00000165733:ENST00000374518:exon20:c.A3156C:p.E1052D	Score=638;Name=lod=522	NA	10q11.21	NA	NA	NA	NA	rs138847020	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0244	NA	0.58	T	0.999	D	0.994	D	0.000	D	1.000	D	3.065	M	2.61	T	-0.932	T	0.098	T	0.693	4.15	21.4	4.54	1.825	1.940	8.055	4.149608	4.149608	0	NA	NA	ID=COSM1347789;OCCURENCE=1(large_intestine)	NA	NA	16.3089334
108	12	121416650	121416650	A	C	exonic	HNF1A	NA	nonsynonymous SNV	HNF1A:NM_000545:exon1:c.A79C:p.I27L	exonic	ENSG00000135100	NA	nonsynonymous SNV	ENSG00000135100:ENST00000257555:exon1:c.A79C:p.I27L,ENSG00000135100:ENST00000400024:exon1:c.A79C:p.I27L,ENSG00000135100:ENST00000402929:exon1:c.A79C:p.I27L,ENSG00000135100:ENST00000538646:exon1:c.A79C:p.I27L,ENSG00000135100:ENST00000540108:exon1:c.A79C:p.I27L,ENSG00000135100:ENST00000541395:exon1:c.A79C:p.I27L,ENSG00000135100:ENST00000541924:exon1:c.A79C:p.I27L,ENSG00000135100:ENST00000544413:exon1:c.A79C:p.I27L	Score=479;Name=lod=118	Name=LDL cholesterol,Cholesterol, total,Gamma gluatamyl transferase levels	12q24.31	Score=755;Name=V$PPARA_01	Name=TAF1	NA	NA	rs1169288	0.3	0.3	0.285	0.298522	0.339	0.3889	0.33	0.0832	0.4325	0.33	0.42	0.34	0.07	0.3533	0.42	0.33	T	0.025	B	0.047	B	0.001	D	0.000	P	1.445	L	-4.99	D	-1.199	T	0.000	T	0.491	2.485	14.27	4.45	1.637	3.135	12.900	2.485259	2.485259	0.09	0.335156	0.120744	ID=COSM430522;OCCURENCE=1(breast)	0.21	CLINSIG=other|other|probable-non-pathogenic|non-pathogenic;CLNDBN=Insulin_resistance\x2c_susceptibility_to|Serum_hdl_cholesterol_level\x2c_modifier_of|not_specified|not_provided;CLNREVSTAT=single|single|single|single;CLNACC=RCV000016074.1|RCV000016075.25|RCV000117233.3|RCV000125370.1;CLNDSDB=MedGen|.|.|.;CLNDSDBID=C1852091|.|.|.	16.3058774
109	8	143816828	143816828	G	A	exonic	THEM6	NA	nonsynonymous SNV	THEM6:NM_016647:exon2:c.G598A:p.G200R	exonic	ENSG00000130193	NA	nonsynonymous SNV	ENSG00000130193:ENST00000336138:exon2:c.G598A:p.G200R	Score=325;Name=lod=28	NA	8q24.3	NA	NA	NA	NA	rs11540544	0.0027	0.0027	0.005	0.00219649	0.008	NA	0.0029	NA	0.001	0.01	NA	NA	NA	0.0194	0.013	0.05	D	1.0	D	1.0	D	0.000	D	1.000	D	1.67	L	0.93	T	-0.814	T	0.152	T	0.323	1.492	10.94	4.07	2.104	2.712	11.646	1.491689	1.491689	0.02	0.012704	0.001366	NA	NA	NA	16.2932294
109	10	100017453	100017453	T	G	exonic	LOXL4	NA	nonsynonymous SNV	LOXL4:NM_032211:exon8:c.A1214C:p.D405A	exonic	ENSG00000138131	NA	nonsynonymous SNV	ENSG00000138131:ENST00000260702:exon8:c.A1214C:p.D405A	Score=420;Name=lod=68	NA	10q24.2	Score=847;Name=V$OCT_C	NA	NA	NA	rs1983864	0.36	0.36	0.316	0.36222	0.341	0.6081	0.5231	0.0575	0.4284	0.35	0.59	0.44	0.08	0.3737	0.59	0	D	1.0	D	1.0	D	0.000	D	0.000	P	2.59	M	0.62	T	-0.872	T	0.000	T	0.347	4.649	25.5	5.55	2.104	6.298	15.692	4.648533	4.648533	0	0.326512	0.104857	NA	0.312	NA	16.2921214
109	22	25301142	25301142	A	G	exonic	SGSM1	NA	nonsynonymous SNV	SGSM1:NM_001098498:exon20:c.A2623G:p.I875V,SGSM1:NM_001098497:exon21:c.A2806G:p.I936V,SGSM1:NM_133454:exon21:c.A2788G:p.I930V,SGSM1:NM_001039948:exon22:c.A2971G:p.I991V	exonic	ENSG00000167037	NA	nonsynonymous SNV	ENSG00000167037:ENST00000400358:exon21:c.A2806G:p.I936V,ENSG00000167037:ENST00000400359:exon22:c.A2971G:p.I991V	Score=529;Name=lod=189	NA	22q11.23	Score=962;Name=V$TCF11_01	NA	NA	NA	rs61742274	0.01	0.01	0.004	0.00419329	0.0169	NA	0.0043	NA	0.001	0.01	NA	0.01	0.002	0.0101	0.015	0.53	T	0.981	D	0.916	D	0.000	D	1.000	D	0.175	N	3.96	T	-0.708	T	0.012	T	0.218	3.549	18.1	5.62	2.278	6.177	15.321	3.548895	3.548895	0.02	0.014685	0.004425	NA	NA	NA	16.2916484
110	9	139946040	139946040	G	A	exonic	ENTPD2	NA	nonsynonymous SNV	ENTPD2:NM_001246:exon3:c.C308T:p.A103V,ENTPD2:NM_203468:exon3:c.C308T:p.A103V	exonic	ENSG00000054179	NA	nonsynonymous SNV	ENSG00000054179:ENST00000312665:exon3:c.C308T:p.A103V,ENSG00000054179:ENST00000355097:exon3:c.C308T:p.A103V	Score=381;Name=lod=47	NA	9q34.3	NA	NA	NA	NA	rs34618694	0.01	0.01	0.006	0.00599042	0.0249	NA	0.0029	NA	0.0031	0.03	NA	0.0028	NA	0.0104	0.03	0.12	T	1.0	D	1.0	D	0.000	D	1.000	D	2.695	M	2.24	T	-0.980	T	0.056	T	0.362	4.063	20.9	4.78	2.203	7.483	16.790	4.063199	4.063199	0	0.014419	0.003636	NA	NA	NA	16.2836144
111	3	32533246	32533246	T	C	exonic	CMTM6	NA	nonsynonymous SNV	CMTM6:NM_017801:exon2:c.A271G:p.T91A	exonic	ENSG00000091317	NA	nonsynonymous SNV	ENSG00000091317:ENST00000205636:exon2:c.A271G:p.T91A	Score=358;Name=lod=38	NA	3p22.3	NA	NA	NA	NA	rs35574803	0.01	0.01	0.009	0.00698882	0.0239	NA	0.0072	NA	0.0061	0.02	NA	0.01	NA	0.0161	0.026	0.07	T	1.0	D	0.998	D	0.000	D	1.000	D	2.545	M	2.95	T	-1.140	T	0.036	T	0.314	2.824	15.41	5.74	2.193	5.542	15.033	2.823896	2.823896	0	0.026512	0.003177	NA	0.043	NA	16.2668214
112	12	122618042	122618042	G	A	exonic	MLXIP	NA	nonsynonymous SNV	MLXIP:NM_014938:exon9:c.G1240A:p.D414N	exonic	ENSG00000175727	NA	nonsynonymous SNV	ENSG00000175727:ENST00000377037:exon1:c.G61A:p.D21N,ENSG00000175727:ENST00000538698:exon1:c.G61A:p.D21N,ENSG00000175727:ENST00000319080:exon9:c.G1240A:p.D414N	Score=278;Name=lod=18	NA	12q24.31	Score=814;Name=V$HNF4_01_B	Name=CTCF,CTCF_(SC-5916)	Name=12	NA	rs113336247	0.01	0.01	0.008	0.00838658	0.0288	NA	0.0101	0.0023	0.0031	0.03	NA	0.01	0.002	0.0233	0.033	0.36	T	0.948	P	0.642	P	0.111	N	0.989	D	.	.	2.45	T	-1.111	T	0.050	T	0.052	1.977	12.57	5.23	2.437	4.150	12.191	1.977335	1.977335	0.01	0.033309	0.006265	NA	0.014	NA	16.2479244
113	14	24533474	24533474	G	A	exonic	LRRC16B	NA	nonsynonymous SNV	LRRC16B:NM_138360:exon32:c.G2999A:p.R1000H	exonic	ENSG00000186648	NA	nonsynonymous SNV	ENSG00000186648:ENST00000334420:exon32:c.G287A:p.R96H,ENSG00000186648:ENST00000342740:exon32:c.G2999A:p.R1000H	Score=568;Name=lod=271	NA	14q11.2	Score=865;Name=V$ATF_01	NA	NA	NA	rs117092113	0.02	0.02	0.025	0.0145767	0.0427	NA	0.0202	0.003	0.0123	0.04	NA	0.02	0.0041	0.0325	0.043	0.15	T	0.999	D	0.989	D	0.001	D	0.519	D	1.1	L	0.98	T	-0.867	T	0.053	T	0.333	2.844	15.47	5.28	2.467	1.176	14.436	2.843857	2.843857	0.16	0.042791	0.010894	NA	0.022	NA	16.2153424
114	11	66358274	66358274	A	C	exonic	CCDC87	NA	nonsynonymous SNV	CCDC87:NM_018219:exon1:c.T2213G:p.L738R	exonic	ENSG00000182791	NA	nonsynonymous SNV	ENSG00000182791:ENST00000333861:exon1:c.T2213G:p.L738R	Score=352;Name=lod=36	NA	11q13.2	NA	NA	NA	NA	rs62000969	0.03	0.03	0.015	0.014976	0.0378	NA	0.0259	0.003	0.0153	0.05	0.01	0.03	0.02	0.0317	0.05	0	D	1.0	D	0.999	D	0.004	N	0.986	D	2.425	M	1.6	T	-0.954	T	0.040	T	0.585	2.846	15.48	5.07	2.132	5.171	11.138	2.846324	2.846324	0	0.049942	0.011818	NA	0.022	NA	16.2138914
115	7	30880413	30880413	G	A	exonic	FAM188B	NA	nonsynonymous SNV	FAM188B:NM_032222:exon9:c.G1394A:p.C465Y	exonic	ENSG00000106125	NA	nonsynonymous SNV	ENSG00000106125:ENST00000265299:exon9:c.G1394A:p.C465Y	Score=446;Name=lod=87	NA	7p14.3	NA	Name=GATA-2	Name=14	NA	rs34970833	0.02	0.02	0.017	0.0161741	0.0427	NA	0.0187	0.0008	0.0245	0.04	NA	0.02	0.002	0.0398	0.053	0	D	0.155	B	0.111	B	0.000	D	1.000	D	0.11	N	1.68	T	-1.072	T	0.008	T	0.493	2.848	15.49	4.93	2.571	3.468	15.684	2.848205	2.848205	0	0.052613	0.010579	NA	0.08	NA	16.1982204
115	6	160196343	160196343	A	G	exonic	ACAT2	NA	nonsynonymous SNV	ACAT2:NM_005891:exon5:c.A632G:p.K211R	exonic	ENSG00000120437	NA	nonsynonymous SNV	ENSG00000120437:ENST00000367048:exon5:c.A632G:p.K211R,ENSG00000120437:ENST00000541436:exon5:c.A719G:p.K240R	Score=444;Name=lod=85	NA	6q25.3	NA	NA	NA	NA	rs25683	0.37	0.37	0.332	0.365216	0.5457	0.1637	0.5965	0.1679	0.4898	0.56	0.15	0.57	0.17	0.516	0.57	0.05	D	0.969	D	0.621	P	0.000	D	0.000	P	1.68	L	-2.84	D	0.433	D	0.657	D	0.118	4.986	29.2	5.65	2.166	8.691	15.880	4.986498	4.986498	0.06	0.574419	0.219927	NA	0.312	NA	16.1972144
115	8	41566438	41566438	C	T	exonic	ANK1	NA	nonsynonymous SNV	ANK1:NM_000037:exon17:c.G1856A:p.R619H,ANK1:NM_001142446:exon17:c.G1955A:p.R652H,ANK1:NM_020475:exon17:c.G1856A:p.R619H,ANK1:NM_020476:exon17:c.G1856A:p.R619H,ANK1:NM_020477:exon17:c.G1856A:p.R619H	exonic	ENSG00000029534	NA	nonsynonymous SNV	ENSG00000029534:ENST00000265709:exon17:c.G1955A:p.R652H,ENSG00000029534:ENST00000289734:exon17:c.G1856A:p.R619H,ENSG00000029534:ENST00000347528:exon17:c.G1856A:p.R619H,ENSG00000029534:ENST00000352337:exon17:c.G1856A:p.R619H,ENSG00000029534:ENST00000379758:exon17:c.G1856A:p.R619H,ENSG00000029534:ENST00000396942:exon17:c.G1856A:p.R619H,ENSG00000029534:ENST00000396945:exon17:c.G1856A:p.R619H	Score=569;Name=lod=275	NA	8p11.21	Score=777;Name=V$ER_Q6	Name=MafF_(M8194),MafK_(SC-477),MafK_(ab50322)	NA	NA	rs2304877	0.05	0.05	0.05	0.0403355	0.0437	0.0397	0.0504	0.0575	0.0072	0.04	0.05	0.04	0.07	0.0436	0.076	0.04	D	0.02	B	0.005	B	0.000	D	1.000	D	2.55	M	-0.21	T	-0.884	T	0.035	T	0.182	2.4	13.98	3.72	0.701	2.589	11.781	2.400068	2.400068	0.01	0.048837	0.054698	NA	0.138	NA	16.1971964
116	12	71533534	71533534	C	G	exonic	TSPAN8	NA	nonsynonymous SNV	TSPAN8:NM_004616:exon4:c.G218C:p.G73A	exonic	ENSG00000127324	NA	nonsynonymous SNV	ENSG00000127324:ENST00000546561:exon3:c.G218C:p.G73A,ENSG00000127324:ENST00000247829:exon4:c.G218C:p.G73A,ENSG00000127324:ENST00000393330:exon7:c.G218C:p.G73A	Score=533;Name=lod=195	NA	12q21.1	NA	NA	NA	NA	rs3763978	0.27	0.27	0.261	0.227037	0.3956	0.2847	0.2233	0.0378	0.2526	0.39	0.31	0.25	0.06	0.3332	0.41	0.01	D	0.999	D	0.989	D	0.000	D	0.000	P	3.59	H	-3.52	D	-1.673	T	0.000	T	0.381	3.885	19.74	5.09	2.525	4.362	16.363	3.884505	3.884505	0.08	0.41	0.109623	ID=COSM1364054;OCCURENCE=1(large_intestine)	0.225	NA	16.1945334
117	3	49737954	49737954	G	A	exonic	RNF123	NA	nonsynonymous SNV	RNF123:NM_022064:exon14:c.G1160A:p.R387Q	exonic	ENSG00000164068	NA	nonsynonymous SNV	ENSG00000164068:ENST00000432042:exon11:c.G722A:p.R241Q,ENSG00000164068:ENST00000327697:exon14:c.G1160A:p.R387Q,ENSG00000164068:ENST00000457726:exon14:c.G1160A:p.R387Q	Score=605;Name=lod=382	NA	3p21.31	NA	Name=CTCF	NA	NA	rs35620248	0.04	0.04	0.032	0.0223642	0.0716	0.006	0.0259	0.0068	0.0072	0.07	0.01	0.04	0.01	0.0497	0.07	0.23	T	0.999	D	0.978	D	0.001	D	1.000	D	0.695	N	-0.63	T	-0.697	T	0.063	T	0.383	4.095	21.1	5.4	2.529	9.053	18.147	4.095435	4.095435	0.08	0.060581	0.009759	NA	0.014	NA	16.1514524
117	14	20837033	20837033	T	C	exonic	TEP1	NA	nonsynonymous SNV	TEP1:NM_007110:exon54:c.A7685G:p.H2562R	exonic	ENSG00000129566	NA	nonsynonymous SNV	ENSG00000129566:ENST00000555008:exon42:c.A5692G:p.M1898V,ENSG00000129566:ENST00000556935:exon52:c.A7361G:p.H2454R,ENSG00000129566:ENST00000262715:exon54:c.A7685G:p.H2562R	Score=472;Name=lod=111	NA	14q11.2	Score=731;Name=V$SEF1_C	NA	NA	NA	rs2104978	0.03	0.03	0.029	0.0345447	0.0656	0.002	0.0317	0.003	0.0808	0.07	NA	0.03	NA	0.0557	0.07	0.6	T	0.999	D	0.977	D	0.001	D	1.000	D	1.24	L	0.35	T	-1.021	T	0.026	T	0.558	4.151	21.4	5.81	2.226	3.917	13.684	4.151048	4.151048	0.12	0.066279	0.014072	NA	0.014	NA	16.1457544
118	1	67518534	67518534	C	T	exonic	SLC35D1	NA	nonsynonymous SNV	SLC35D1:NM_015139:exon3:c.G244A:p.A82T	exonic	ENSG00000116704	NA	nonsynonymous SNV	ENSG00000116704:ENST00000506472:exon2:c.G7A:p.A3T,ENSG00000116704:ENST00000235345:exon3:c.G244A:p.A82T	Score=501;Name=lod=145	NA	1p31.3	Score=899;Name=V$TAL1ALPHAE47_01	Name=FOXA1_(SC-101058),FOXA2_(SC-6554),FOXA1_(C-20)	Name=9	NA	rs10157422	0.09	0.09	0.095	0.104233	0.0577	NA	0.062	0.267	0.0695	0.06	NA	0.07	0.24	0.075	0.24	0.56	T	0.402	B	0.109	B	0.000	D	0.000	P	1.935	M	0.28	T	-0.903	T	0.125	T	0.443	5.022	29.6	5.05	2.342	7.390	17.161	5.022245	5.022245	0.25	0.06593	0.233999	NA	0.167	NA	16.1347034
119	2	166152389	166152389	G	A	exonic	SCN2A	NA	nonsynonymous SNV	SCN2A:NM_001040143:exon1:c.G56A:p.R19K,SCN2A:NM_001040142:exon2:c.G56A:p.R19K,SCN2A:NM_021007:exon2:c.G56A:p.R19K	exonic	ENSG00000136531	NA	nonsynonymous SNV	ENSG00000136531:ENST00000375427:exon1:c.G56A:p.R19K,ENSG00000136531:ENST00000283256:exon2:c.G56A:p.R19K,ENSG00000136531:ENST00000357398:exon2:c.G56A:p.R19K,ENSG00000136531:ENST00000375437:exon2:c.G56A:p.R19K,ENSG00000136531:ENST00000424833:exon2:c.G56A:p.R19K	Score=785;Name=lod=2057	NA	2q24.3	Score=890;Name=V$NFKAPPAB50_01	NA	NA	NA	rs17183814	0.07	0.07	0.054	0.0838658	0.0567	0.1379	0.0821	0.0212	0.1421	0.06	0.13	0.08	0.02	0.082	0.13	0.13	T	0.002	B	0.015	B	0.000	D	0.846	P	2.015	M	-4.0	D	-0.458	T	0.055	T	0.141	1.76	11.85	5.55	2.619	2.409	13.755	1.760255	1.760255	0.18	0.071628	0.033591	NA	0.08	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118260.2;CLNDSDB=.;CLNDSDBID=.	16.1230054
120	1	24409191	24409191	C	T	exonic	MYOM3	NA	nonsynonymous SNV	MYOM3:NM_152372:exon17:c.G1984A:p.G662R	exonic	ENSG00000142661	NA	nonsynonymous SNV	ENSG00000142661:ENST00000329601:exon17:c.G1984A:p.G662R,ENSG00000142661:ENST00000330966:exon17:c.G1987A:p.G663R,ENSG00000142661:ENST00000374434:exon17:c.G1984A:p.G662R	Score=309;Name=lod=24	NA	1p36.11	Score=794;Name=V$ARP1_01	NA	NA	NA	rs4320729	0.32	0.32	0.274	0.256789	0.4364	0.4266	0.3213	0.0159	0.1769	0.45	0.43	0.3	0.02	0.3683	0.45	0.03	D	1.0	D	0.999	D	0.000	D	0.000	P	2.425	M	0.06	T	-1.025	T	0.000	T	0.454	3.702	18.8	5.41	2.546	5.783	19.197	3.701981	3.701981	0	0.419447	0.08288	NA	0.188	NA	16.1091864
121	9	125377734	125377734	A	G	exonic	OR1Q1	NA	nonsynonymous SNV	OR1Q1:NM_012364:exon1:c.A718G:p.T240A	exonic	ENSG00000165202	NA	nonsynonymous SNV	ENSG00000165202:ENST00000297913:exon1:c.A718G:p.T240A	Score=464;Name=lod=103	NA	9q33.2	NA	NA	NA	NA	rs727913	0.12	0.12	0.097	0.11901	0.0646	0.3165	0.1715	0.0227	0.0644	0.06	0.27	0.14	0.03	0.1028	0.27	0	D	1.0	D	1.0	D	0.000	D	0.035	P	3.7	H	1.01	T	-1.093	T	0.000	T	0.346	4.197	21.8	5.57	2.340	8.871	14.857	4.196836	4.196836	0	0.063605	0.027916	NA	0.058	NA	16.1023284
122	8	101718932	101718932	C	G	exonic	PABPC1	NA	nonsynonymous SNV	PABPC1:NM_002568:exon11:c.G1549C:p.V517L	exonic	ENSG00000070756	NA	nonsynonymous SNV	ENSG00000070756:ENST00000517990:exon1:c.G76C:p.V26L,ENSG00000070756:ENST00000522658:exon2:c.G190C:p.V64L,ENSG00000070756:ENST00000318607:exon11:c.G1549C:p.V517L,ENSG00000070756:ENST00000519004:exon12:c.G1414C:p.V472L,ENSG00000070756:ENST00000522387:exon12:c.G1453C:p.V485L	Score=596;Name=lod=351	NA	8q22.3	Score=846;Name=V$MRF2_01	Name=CTCF_(SC-5916)	NA	NA	rs62513920	NA	NA	0.061	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2544	NA	0.32	T	0.0	B	0.003	B	0.001	D	1.000	D	1.915	M	1.01	T	-1.002	T	0.128	T	0.822	5.122	32	5.3	2.658	7.233	19.321	5.122361	5.122361	0.09	NA	NA	NA	NA	NA	16.0789334
123	1	110766454	110766454	G	A	exonic	KCNC4	NA	nonsynonymous SNV	KCNC4:NM_001039574:exon2:c.G1547A:p.R516Q,KCNC4:NM_004978:exon2:c.G1547A:p.R516Q	exonic	ENSG00000116396	NA	nonsynonymous SNV	ENSG00000116396:ENST00000369787:exon2:c.G1547A:p.R516Q,ENSG00000116396:ENST00000413138:exon2:c.G1547A:p.R516Q,ENSG00000116396:ENST00000438661:exon2:c.G1547A:p.R516Q,ENSG00000116396:ENST00000469655:exon2:c.G1547A:p.R516Q	Score=547;Name=lod=222	NA	1p13.3	NA	NA	NA	NA	rs59123361	0.07	0.07	0.067	0.0503195	0.0924	0.0437	0.0821	0.0265	0.0235	0.09	0.06	0.08	0.03	0.0827	0.11	0.57	T	0.861	P	0.531	P	0.015	N	0.992	D	1.59	L	-4.24	D	0.110	D	0.831	D	0.137	2.249	13.48	4.89	2.422	3.299	12.519	2.248558	2.248558	0.34	0.105233	0.036768	NA	0.065	NA	16.0530004
124	17	41879074	41879074	T	C	exonic	MPP3	NA	nonsynonymous SNV	MPP3:NM_001932:exon20:c.A1753G:p.R585G	exonic	ENSG00000161647	NA	nonsynonymous SNV	ENSG00000161647:ENST00000398393:exon18:c.A1828G:p.R610G,ENSG00000161647:ENST00000398389:exon20:c.A1753G:p.R585G	Score=437;Name=lod=80	NA	17q21.31	NA	NA	NA	NA	rs17742683	0.06	0.06	0.053	0.0676917	0.1133	0.0367	0.0764	0.0061	0.1299	0.11	0.02	0.08	0.01	0.0901	0.11	0.01	D	0.999	D	0.994	D	0.000	D	0.001	P	1.975	M	2.18	T	-1.098	T	0.003	T	0.357	3.682	18.71	5.33	2.238	2.739	12.904	3.682451	3.682451	0	0.098722	0.01749	ID=COSM1579573;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.152	NA	16.0312114
124	6	75797302	75797302	C	T	exonic	COL12A1	NA	nonsynonymous SNV	COL12A1:NM_080645:exon50:c.G5680A:p.G1894S,COL12A1:NM_004370:exon65:c.G9172A:p.G3058S	exonic	ENSG00000111799	NA	nonsynonymous SNV	ENSG00000111799:ENST00000425443:exon21:c.G2086A:p.G696S,ENSG00000111799:ENST00000345356:exon50:c.G5680A:p.G1894S,ENSG00000111799:ENST00000416123:exon62:c.G8944A:p.G2982S,ENSG00000111799:ENST00000322507:exon65:c.G9172A:p.G3058S,ENSG00000111799:ENST00000483888:exon65:c.G9160A:p.G3054S	Score=584;Name=lod=316	NA	6q13	NA	NA	NA	NA	rs970547	0.72	0.72	0.713	0.711861	0.7744	0.6796	0.7738	0.6831	0.6759	0.77	0.68	0.79	0.65	0.7451	0.79	0.05	D	1.0	D	0.999	D	0.000	D	0.000	P	1.65	L	-2.08	D	0.557	D	0.755	D	0.507	5.487	35	5.75	2.719	7.463	19.548	5.48679	5.48679	0.08	0.784281	0.659067	ID=COSM150125;OCCURENCE=1(stomach)	0.826	NA	16.0295524
125	17	4689313	4689313	G	C	exonic	VMO1	NA	nonsynonymous SNV	VMO1:NM_001144939:exon2:c.C230G:p.T77S,VMO1:NM_001144940:exon2:c.C230G:p.T77S,VMO1:NM_182566:exon2:c.C230G:p.T77S	exonic	ENSG00000182853	NA	nonsynonymous SNV	ENSG00000182853:ENST00000328739:exon2:c.C230G:p.T77S,ENSG00000182853:ENST00000416307:exon2:c.C230G:p.T77S,ENSG00000182853:ENST00000441199:exon2:c.C230G:p.T77S	Score=343;Name=lod=33	NA	17p13.2	NA	NA	NA	NA	rs2279961	0.11	0.11	0.097	0.0946486	0.0994	0.0992	0.1052	0.115	0.0501	0.1	0.11	0.1	0.13	0.1043	0.13	0.02	D	1.0	D	1.0	D	0.000	D	0.000	P	2.575	M	0.67	T	-0.929	T	0.005	T	0.387	3.073	16.26	4.43	2.286	7.187	12.404	3.073061	3.073061	0	0.106279	0.125057	NA	0.072	NA	16.0233544
126	12	125348263	125348263	C	T	exonic	SCARB1	NA	nonsynonymous SNV	SCARB1:NM_001082959:exon1:c.G4A:p.G2S,SCARB1:NM_005505:exon1:c.G4A:p.G2S	exonic	ENSG00000073060	NA	nonsynonymous SNV	ENSG00000073060:ENST00000261693:exon1:c.G4A:p.G2S,ENSG00000073060:ENST00000339570:exon1:c.G4A:p.G2S,ENSG00000073060:ENST00000376788:exon1:c.G4A:p.G2S,ENSG00000073060:ENST00000415380:exon1:c.G4A:p.G2S,ENSG00000073060:ENST00000545493:exon1:c.G4A:p.G2S,ENSG00000073060:ENST00000546215:exon1:c.G4A:p.G2S	Score=371;Name=lod=43	NA	12q24.31	NA	Name=AP-2alpha,Pol2-4H8,AP-2gamma,CCNT2,POU2F2,E2F6_(H-50),TAF1,E2F6,Mxi1_(bHLH),Pol2,Oct-2,Rad21	Name=138	NA	rs4238001	0.08	0.08	0.101	0.0642971	0.1163	0.003	0.0994	0.0666	0.046	0.11	NA	0.1	0.09	0.1084	0.11	0.03	D	1.0	D	0.994	D	0.776	U	0.000	P	1.87	L	0.18	T	-0.739	T	0.030	T	0.153	3.635	18.49	3.22	1.734	1.365	10.591	3.635365	3.635365	0	0.099133	0.052494	NA	NA	NA	16.0095004
127	12	48367976	48367976	C	T	exonic	COL2A1	NA	nonsynonymous SNV	COL2A1:NM_033150:exon52:c.G4006A:p.G1336S,COL2A1:NM_001844:exon53:c.G4213A:p.G1405S	exonic	ENSG00000139219	NA	nonsynonymous SNV	ENSG00000139219:ENST00000337299:exon52:c.G4006A:p.G1336S,ENSG00000139219:ENST00000380518:exon53:c.G4213A:p.G1405S	Score=495;Name=lod=137	NA	12q13.11	Score=846;Name=V$RFX1_01	NA	NA	NA	rs2070739	0.2	0.2	0.16	0.170927	0.0964	0.4286	0.2896	0.0038	0.1237	0.11	0.43	0.27	0.01	0.15	0.43	0.17	T	1.0	D	0.999	D	0.000	D	0.000	P	2.835	M	-0.8	T	-1.115	T	0.000	T	0.497	4.51	24.2	5.06	2.500	4.064	18.380	4.509832	4.509832	0.03	0.094186	0.022242	NA	0.101	NA	15.9927474
127	7	36438709	36438709	C	G	exonic	ANLN	NA	nonsynonymous SNV	ANLN:NM_018685:exon3:c.C194G:p.S65W	exonic	ENSG00000011426	NA	nonsynonymous SNV	ENSG00000011426:ENST00000265748:exon3:c.C194G:p.S65W,ENSG00000011426:ENST00000396068:exon3:c.C194G:p.S65W,ENSG00000011426:ENST00000424865:exon3:c.C128G:p.S43W	Score=499;Name=lod=142	NA	7p14.2	NA	NA	NA	NA	rs3735400	0.12	0.12	0.095	0.126997	0.0984	0.1806	0.1686	0.1036	0.1033	0.11	0.16	0.13	0.09	0.1307	0.16	0	D	1.0	D	0.999	D	0.000	D	0.000	P	2.255	M	3.82	T	-1.035	T	0.002	T	0.425	3.481	17.81	4.59	1.453	4.346	14.312	3.481073	3.481073	0	0.113256	0.121652	ID=COSM1131590;OCCURENCE=1(prostate)	0.159	NA	15.9909774
128	1	236175327	236175327	C	A	exonic	NID1	NA	nonsynonymous SNV	NID1:NM_002508:exon12:c.G2421T:p.Q807H	exonic	ENSG00000116962	NA	nonsynonymous SNV	ENSG00000116962:ENST00000264187:exon12:c.G2421T:p.Q807H	Score=479;Name=lod=118	NA	1q42.3	Score=787;Name=V$PPARG_03	NA	Name=6	NA	rs3738531	0.16	0.16	0.14	0.194489	0.0885	0.2589	0.3127	0.1104	0.2669	0.08	0.26	0.23	0.12	0.1655	0.26	0.11	T	0.953	P	0.895	P	0.000	D	0.000	P	1.15	L	-1.77	D	-1.131	T	0.000	T	0.15	3.082	16.29	3.58	1.425	1.145	9.729	3.081801	3.081801	NA	0.098372	0.110077	NA	0.145	NA	15.9809614
129	5	162896650	162896650	C	T	exonic	HMMR	NA	nonsynonymous SNV	HMMR:NM_001142557:exon2:c.C16T:p.R6C,HMMR:NM_012485:exon4:c.C229T:p.R77C,HMMR:NM_001142556:exon5:c.C277T:p.R93C,HMMR:NM_012484:exon5:c.C274T:p.R92C	exonic	ENSG00000072571	NA	nonsynonymous SNV	ENSG00000072571:ENST00000432118:exon2:c.C16T:p.R6C,ENSG00000072571:ENST00000353866:exon4:c.C229T:p.R77C,ENSG00000072571:ENST00000358715:exon5:c.C274T:p.R92C,ENSG00000072571:ENST00000393915:exon5:c.C277T:p.R93C	Score=363;Name=lod=40	NA	5q34	NA	NA	NA	NA	rs299284	0.08	0.08	0.09	0.0746805	0.1402	0.0119	0.0663	0.0688	0.0859	0.14	0.01	0.08	0.08	0.1037	0.14	0.02	D	1.0	D	0.983	D	0.000	D	0.000	P	2.135	M	1.36	T	-0.881	T	0.013	T	0.535	4.458	23.8	5.31	1.626	5.623	15.756	4.457728	4.457728	0.01	0.117674	0.088743	NA	0.087	NA	15.9717594
130	11	4945199	4945199	C	T	exonic	OR51G1	NA	nonsynonymous SNV	OR51G1:NM_001005237:exon1:c.G371A:p.R124H	exonic	ENSG00000176879	NA	nonsynonymous SNV	ENSG00000176879:ENST00000321961:exon1:c.G371A:p.R124H	Score=371;Name=lod=43	NA	11p15.4	Score=820;Name=V$HNF4_01_B	NA	NA	NA	rs34742470	0.08	0.08	0.063	0.0489217	0.1441	NA	0.0937	0.0144	0.0164	0.14	NA	0.13	0.02	0.0937	0.14	0.01	D	1.0	D	0.996	D	0.001	U	0.000	P	3.33	M	-1.1	T	-0.687	T	0.016	T	0.106	2.662	14.86	3.3	0.988	2.992	11.045	2.66219	2.66219	0.02	0.132271	0.036801	NA	0.123	NA	15.9632624
130	2	43732823	43732823	T	C	exonic	THADA	NA	nonsynonymous SNV	THADA:NM_001083953:exon24:c.A3559G:p.T1187A,THADA:NM_022065:exon24:c.A3559G:p.T1187A	exonic	ENSG00000115970	NA	nonsynonymous SNV	ENSG00000115970:ENST00000330266:exon15:c.A2689G:p.T897A,ENSG00000115970:ENST00000405006:exon24:c.A3559G:p.T1187A,ENSG00000115970:ENST00000405975:exon24:c.A3559G:p.T1187A,ENSG00000115970:ENST00000415080:exon24:c.A2689G:p.T897A	Score=549;Name=lod=228	Name=Type 2 diabetes	2p21	Score=934;Name=V$SOX5_01	NA	NA	NA	rs7578597	0.12	0.12	0.137	0.137181	0.0905	0.006	0.0749	0.3094	0.1319	0.09	0.01	0.07	0.34	0.1733	0.34	0.11	T	1.0	D	0.998	D	0.000	D	0.000	P	1.045	L	1.15	T	-0.995	T	0.000	T	0.434	3.099	16.35	5.54	2.323	4.611	14.795	3.099337	3.099337	0.12	0.109738	0.260215	NA	0.152	NA	15.9597954
131	16	55862883	55862883	C	A	exonic	CES1	NA	nonsynonymous SNV	CES1:NM_001025194:exon2:c.G53T:p.G18V,CES1:NM_001025195:exon2:c.G56T:p.G19V,CES1:NM_001266:exon2:c.G53T:p.G18V	exonic	ENSG00000198848	NA	nonsynonymous SNV	ENSG00000198848:ENST00000360526:exon2:c.G56T:p.G19V,ENSG00000198848:ENST00000361503:exon2:c.G53T:p.G18V,ENSG00000198848:ENST00000422046:exon2:c.G53T:p.G18V	Score=251;Name=lod=14	NA	16q12.2	NA	NA	NA	NA	rs3826190	0.37	0.37	0.32	NA	NA	NA	NA	NA	NA	0.44	0.2	0.39	0.45	0.3912	0.45	0.01	D	0.992	D	0.969	D	0.000	N	1.000	D	1.96	M	-0.17	T	-0.842	T	0.000	T	0.599	3.604	18.35	3.52	2.051	1.881	9.530	3.604104	3.604104	0	NA	NA	ID=COSM1128928;OCCURENCE=1(prostate)	0.007	NA	15.9421334
132	9	132580901	132580901	C	G	exonic	TOR1A	NA	nonsynonymous SNV	TOR1A:NM_000113:exon4:c.G646C:p.D216H	exonic	ENSG00000136827	NA	nonsynonymous SNV	ENSG00000136827:ENST00000351698:exon4:c.G646C:p.D216H	Score=391;Name=lod=52	NA	9q34.11	NA	NA	NA	NA	rs1801968	0.08	0.08	0.082	0.0836661	0.1382	0.0556	0.1095	0.0023	0.1483	0.15	0.05	0.07	0.01	0.1228	0.15	0.02	D	0.904	P	0.615	P	0.000	D	0.039	P	1.935	M	1.0	T	-1.035	T	0.001	T	0.374	3.635	18.49	5.17	1.557	1.255	9.879	3.634709	3.634709	0.01	0.139884	0.027463	NA	0.051	CLINSIG=other|pathogenic;CLNDBN=Dystonia_1\x2c_torsion\x2c_modifier_of|Dystonia_1;CLNREVSTAT=single|single;CLNACC=RCV000005490.3|RCV000020122.1;CLNDSDB=.|GeneReviews:MedGen:OMIM:Orphanet;CLNDSDBID=.|NBK1492:C1851945:128100:ORPHA256	15.9324494
133	19	11526765	11526765	G	T	exonic	RGL3	NA	nonsynonymous SNV	RGL3:NM_001035223:exon5:c.C485A:p.P162H,RGL3:NM_001161616:exon5:c.C485A:p.P162H	exonic	ENSG00000205517	NA	nonsynonymous SNV	ENSG00000205517:ENST00000567431:exon4:c.C377A:p.P126H,ENSG00000205517:ENST00000380456:exon5:c.C485A:p.P162H,ENSG00000205517:ENST00000393423:exon5:c.C485A:p.P162H,ENSG00000205517:ENST00000567080:exon5:c.C451A:p.P151T	Score=417;Name=lod=66	NA	19p13.2	Score=863;Name=V$STAT5A_01	NA	NA	NA	rs167479	0.4	0.4	0.362	0.445687	0.4602	0.4782	0.5476	0.1861	0.6759	0.45	0.46	0.52	0.17	0.4952	0.52	0	D	1.0	D	0.993	D	0.000	D	0.046	P	2.215	M	1.54	T	-0.901	T	0.000	T	0.292	3.842	19.51	3.81	0.990	3.633	13.199	3.8419	3.8419	0	0.485	0.235134	NA	0.355	NA	15.8929334
133	19	19413092	19413092	C	T	exonic	SUGP1	NA	nonsynonymous SNV	SUGP1:NM_172231:exon7:c.G869A:p.R290H	exonic	ENSG00000105705	NA	nonsynonymous SNV	ENSG00000105705:ENST00000247001:exon7:c.G869A:p.R290H	Score=509;Name=lod=156	NA	19p13.11	Score=715;Name=V$NRSF_01	NA	NA	NA	rs17751061	0.07	0.07	0.074	0.0688898	0.164	NA	0.1037	0.0061	0.1022	0.15	NA	0.12	0.01	0.1197	0.16	0.06	T	1.0	D	0.999	D	0.000	D	0.000	P	2.28	M	0.93	T	-1.154	T	0.002	T	0.581	4.974	29.1	5.03	2.350	5.788	16.924	4.97375	4.97375	0.01	0.158023	0.030413	NA	0.08	NA	15.8916104
134	6	133789728	133789728	G	A	exonic	EYA4	NA	nonsynonymous SNV	EYA4:NM_172103:exon10:c.G760A:p.G254S,EYA4:NM_004100:exon11:c.G829A:p.G277S,EYA4:NM_172105:exon11:c.G829A:p.G277S	exonic	ENSG00000112319	NA	nonsynonymous SNV	ENSG00000112319:ENST00000430974:exon9:c.G667A:p.G223S,ENSG00000112319:ENST00000355286:exon10:c.G760A:p.G254S,ENSG00000112319:ENST00000431403:exon10:c.G829A:p.G277S,ENSG00000112319:ENST00000452339:exon10:c.G667A:p.G223S,ENSG00000112319:ENST00000525849:exon10:c.G760A:p.G254S,ENSG00000112319:ENST00000355167:exon11:c.G829A:p.G277S,ENSG00000112319:ENST00000367895:exon11:c.G829A:p.G277S,ENSG00000112319:ENST00000531901:exon11:c.G829A:p.G277S	Score=617;Name=lod=430	NA	6q23.2	NA	NA	NA	NA	rs9493627	0.39	0.39	0.378	0.409545	0.3111	0.3442	0.3429	0.5688	0.41	0.31	0.38	0.33	0.57	0.3417	0.57	0.42	T	0.969	D	0.868	P	0.000	D	0.000	P	1.535	L	-1.69	D	-0.202	T	0.533	D	0.599	5.55	35	5.49	2.739	9.420	19.744	5.550184	5.550184	0.09	0.312791	0.519973	NA	0.5	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000037882.1;CLNDSDB=.;CLNDSDBID=.	15.8677424
134	15	74219546	74219546	G	T	exonic	LOXL1	NA	nonsynonymous SNV	LOXL1:NM_005576:exon1:c.G422T:p.R141L	exonic	ENSG00000129038	NA	nonsynonymous SNV	ENSG00000129038:ENST00000261921:exon1:c.G422T:p.R141L,ENSG00000129038:ENST00000566011:exon1:c.G422T:p.R141L	Score=614;Name=lod=419	NA	15q24.1	Score=835;Name=V$AHRARNT_01	Name=Pol2,c-Myc	Name=31	NA	rs1048661	0.32	0.32	0.317	0.311302	0.3201	0.5179	0.3055	0.1536	0.3067	0.32	0.51	0.27	0.13	0.3374	0.51	0.01	D	0.914	P	0.325	B	0.366	N	0.292	P	1.67	L	1.6	T	-0.911	T	0.000	T	0.414	4.335	22.8	4.1	1.818	2.792	13.824	4.334587	4.334587	0	0.309667	0.160208	NA	0.007	CLINSIG=other;CLNDBN=Exfoliation_syndrome\x2c_susceptibility_to;CLNREVSTAT=single;CLNACC=RCV000015434.1;CLNDSDB=.;CLNDSDBID=.	15.8661664
135	9	38396002	38396002	C	T	exonic	ALDH1B1	NA	nonsynonymous SNV	ALDH1B1:NM_000692:exon2:c.C257T:p.A86V	exonic	ENSG00000137124	NA	nonsynonymous SNV	ENSG00000137124:ENST00000377698:exon2:c.C257T:p.A86V	Score=457;Name=lod=96	NA	9p13.2	NA	NA	NA	NA	rs2228093	0.22	0.22	0.187	0.230431	0.1511	0.3929	0.2853	0.0809	0.3078	0.15	0.4	0.25	0.11	0.1851	0.4	0	D	1.0	D	0.996	D	0.000	D	0.000	P	3.07	M	1.73	T	-1.015	T	0.000	T	0.221	4.857	27.7	5.51	2.598	7.201	16.901	4.856835	4.856835	0	0.132907	0.107127	NA	0.123	NA	15.8642264
136	2	1168781	1168781	C	A	exonic	SNTG2	NA	nonsynonymous SNV	SNTG2:NM_018968:exon8:c.C503A:p.S168Y	exonic	ENSG00000172554	NA	nonsynonymous SNV	ENSG00000172554:ENST00000308624:exon8:c.C503A:p.S168Y	Score=472;Name=lod=111	NA	2p25.3	NA	NA	NA	NA	rs28505970	0.18	0.18	0.191	0.20627	0.169	0.1042	0.098	0.3608	0.2178	0.17	0.1	0.1	0.35	0.1629	0.35	0.02	D	0.999	D	0.996	D	0.000	D	0.000	P	2.2	M	0.55	T	-1.085	T	0.000	T	0.14	2.55	14.49	4.58	2.067	4.969	15.167	2.550271	2.550271	0.02	0.150754	0.301595	ID=COSM148791;OCCURENCE=1(stomach)	0.254	NA	15.8506794
136	3	183861243	183861243	A	G	exonic	EIF2B5	NA	nonsynonymous SNV	EIF2B5:NM_003907:exon13:c.A1759G:p.I587V	exonic	ENSG00000145191	NA	nonsynonymous SNV	ENSG00000145191:ENST00000273783:exon13:c.A1759G:p.I587V,ENSG00000145191:ENST00000444495:exon13:c.A1759G:p.I587V	Score=627;Name=lod=471	NA	3q27.1	NA	Name=USF2,USF-1,NFKB	Name=6	NA	rs843358	0.37	0.37	0.353	0.389976	0.3042	0.5288	0.3646	0.3268	0.4387	0.29	0.53	0.34	0.33	0.3498	0.53	1	T	0.591	P	0.163	B	0.000	D	0.000	P	1.385	L	-1.55	D	-0.973	T	0.000	T	0.256	1.988	12.6	5.72	2.183	5.214	16.015	1.988085	1.988085	0.14	0.328721	0.327054	NA	0.275	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000080353.3;CLNDSDB=.;CLNDSDBID=.	15.8506124
136	15	40308859	40308859	G	T	exonic	EIF2AK4	NA	nonsynonymous SNV	EIF2AK4:NM_001013703:exon28:c.G3916T:p.G1306C	exonic	ENSG00000128829	NA	nonsynonymous SNV	ENSG00000128829:ENST00000382727:exon27:c.G3832T:p.G1278C,ENSG00000128829:ENST00000263791:exon28:c.G3916T:p.G1306C	Score=504;Name=lod=149	NA	15q15.1	NA	NA	Name=59	NA	rs35602605	0.09	0.09	0.075	0.0698882	0.1769	0.006	0.0965	0.0234	0.0695	0.18	0.01	0.1	0.03	0.1306	0.18	0.08	T	1.0	D	0.995	D	0.000	D	0.000	P	2.265	M	1.18	T	-1.223	T	0.001	T	0.383	4.234	22	5.52	2.751	7.807	19.818	4.23406	4.23406	0	0.177505	0.050449	NA	0.072	NA	15.8483284
136	17	45234417	45234417	A	G	exonic	CDC27	NA	nonsynonymous SNV	CDC27:NM_001114091:exon7:c.T704C:p.I235T,CDC27:NM_001256:exon7:c.T704C:p.I235T	exonic	ENSG00000004897	NA	nonsynonymous SNV	ENSG00000004897:ENST00000446365:exon6:c.T521C:p.I174T,ENSG00000004897:ENST00000066544:exon7:c.T704C:p.I235T,ENSG00000004897:ENST00000526866:exon7:c.T704C:p.I235T,ENSG00000004897:ENST00000527547:exon7:c.T704C:p.I235T,ENSG00000004897:ENST00000531206:exon7:c.T704C:p.I235T	Score=731;Name=lod=1246	NA	17q21.32	Score=790;Name=V$GFI1_01	Name=HDAC2_(SC-6296),GATA-2,HA-E2F1,YY1,TAL1_(SC-12984),ZZZ3,EBF,BRF2,Pol2(b),ZNF274,TBP,Nrf1,SETDB1,MafK_(ab50322),IRF3,NFKB,SUZ12,TR4,TAF7_(SQ-8),SMC3_(ab9263),Mxi1_(bHLH),PU.1,BDP1,RPC155,ZBTB33,CTCFL_(SC-98982),p300_(F-4),TAF1,RXRA,GTF2F1_(RAP-74),CHD2_(N-1250),p300,CTCF,BRF1,STAT1	Name=145	NA	rs193061947	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4881	NA	0.56	T	0.131	B	0.046	B	0.000	D	1.000	D	0.695	N	0.81	T	-0.916	T	0.162	T	0.93	3.169	16.6	5.44	2.066	8.754	13.444	3.168932	3.168932	0.01	NA	NA	NA	NA	NA	15.8452334
137	6	136582417	136582417	G	A	exonic	BCLAF1	NA	nonsynonymous SNV	BCLAF1:NM_001077440:exon11:c.C2590T:p.R864C,BCLAF1:NM_001077441:exon12:c.C2224T:p.R742C,BCLAF1:NM_014739:exon12:c.C2743T:p.R915C	exonic	ENSG00000029363	NA	nonsynonymous SNV	ENSG00000029363:ENST00000031135:exon4:c.C397T:p.R133C,ENSG00000029363:ENST00000392348:exon9:c.C2590T:p.R864C,ENSG00000029363:ENST00000353331:exon11:c.C2590T:p.R864C,ENSG00000029363:ENST00000527536:exon11:c.C2596T:p.R866C,ENSG00000029363:ENST00000527759:exon12:c.C2737T:p.R913C,ENSG00000029363:ENST00000530767:exon12:c.C2224T:p.R742C,ENSG00000029363:ENST00000531224:exon12:c.C2743T:p.R915C	Score=733;Name=lod=1274	NA	6q23.3	NA	NA	NA	NA	rs62431283	NA	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4925	NA	0.04	D	1.0	D	0.997	D	0.000	D	1.000	D	0	N	4.26	T	-0.997	T	0.084	T	0.875	2.705	15.01	5.71	2.691	5.363	18.034	2.70494	2.70494	0.03	NA	NA	NA	NA	NA	15.8408334
137	9	286593	286593	C	A	exonic	DOCK8	NA	nonsynonymous SNV	DOCK8:NM_001190458:exon2:c.C85A:p.P29T,DOCK8:NM_001193536:exon2:c.C85A:p.P29T,DOCK8:NM_203447:exon3:c.C289A:p.P97T	exonic	ENSG00000107099	NA	nonsynonymous SNV	ENSG00000107099:ENST00000469391:exon2:c.C85A:p.P29T,ENSG00000107099:ENST00000483757:exon2:c.C85A:p.P29T,ENSG00000107099:ENST00000432829:exon3:c.C85A:p.P29T,ENSG00000107099:ENST00000453981:exon3:c.C289A:p.P97T,ENSG00000107099:ENST00000479404:exon3:c.C85A:p.P29T,ENSG00000107099:ENST00000487230:exon3:c.C85A:p.P29T	Score=556;Name=lod=242	NA	9p24.3	NA	NA	Name=2	NA	rs529208	0.52	0.52	0.502	0.529752	0.4841	0.7212	0.5231	0.3918	0.5706	0.47	0.72	0.51	0.39	0.5206	0.72	0.05	D	0.996	D	0.978	D	0.000	D	0.000	P	2.085	M	0.72	T	-0.961	T	0.000	T	0.443	3.734	18.96	4.57	1.315	3.149	9.993	3.734202	3.734202	0.08	0.489884	0.414208	NA	0.442	NA	15.8387494
137	17	21319230	21319230	G	C	exonic	KCNJ12,KCNJ18	NA	nonsynonymous SNV	KCNJ18:NM_001194958:exon3:c.G576C:p.Q192H,KCNJ12:NM_021012:exon3:c.G576C:p.Q192H	exonic	ENSG00000184185	NA	nonsynonymous SNV	ENSG00000184185:ENST00000331718:exon3:c.G576C:p.Q192H,ENSG00000184185:ENST00000583088:exon3:c.G576C:p.Q192H	Score=512;Name=lod=161	NA	17p11.2	NA	NA	NA	NA	rs1657742	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4975	0.28	0.03	D	0.004	B	0.009	B	0.000	N	0.998	D	1.6	L	-3.38	D	0.178	D	0.691	D	0.731	1.781	11.91	5.32	2.496	2.586	9.678	1.781011	1.781011	0.06	NA	NA	ID=COSM436189;OCCURENCE=1(breast)	0.254	NA	15.8358334
137	6	136582497	136582497	G	T	exonic	BCLAF1	NA	nonsynonymous SNV	BCLAF1:NM_001077440:exon11:c.C2510A:p.T837N,BCLAF1:NM_001077441:exon12:c.C2144A:p.T715N,BCLAF1:NM_014739:exon12:c.C2663A:p.T888N	exonic	ENSG00000029363	NA	nonsynonymous SNV	ENSG00000029363:ENST00000031135:exon4:c.C317A:p.T106N,ENSG00000029363:ENST00000392348:exon9:c.C2510A:p.T837N,ENSG00000029363:ENST00000353331:exon11:c.C2510A:p.T837N,ENSG00000029363:ENST00000527536:exon11:c.C2516A:p.T839N,ENSG00000029363:ENST00000527759:exon12:c.C2657A:p.T886N,ENSG00000029363:ENST00000530767:exon12:c.C2144A:p.T715N,ENSG00000029363:ENST00000531224:exon12:c.C2663A:p.T888N	Score=733;Name=lod=1274	NA	6q23.3	Score=879;Name=V$YY1_01	NA	NA	NA	rs62431284	NA	NA	0.052	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4976	0.011	0.06	T	1.0	D	0.999	D	0.001	D	1.000	D	0.46	N	4.32	T	-0.818	T	0.147	T	0.491	3.988	20.4	5.5	2.581	8.020	19.396	3.987729	3.987729	0.02	NA	NA	NA	0.014	NA	15.8357334
138	6	136599822	136599822	C	G	exonic	BCLAF1	NA	nonsynonymous SNV	BCLAF1:NM_001077440:exon4:c.G191C:p.G64A,BCLAF1:NM_001077441:exon4:c.G197C:p.G66A,BCLAF1:NM_014739:exon4:c.G197C:p.G66A	exonic	ENSG00000029363	NA	nonsynonymous SNV	ENSG00000029363:ENST00000392348:exon2:c.G191C:p.G64A,ENSG00000029363:ENST00000353331:exon4:c.G191C:p.G64A,ENSG00000029363:ENST00000527536:exon4:c.G197C:p.G66A,ENSG00000029363:ENST00000527613:exon4:c.G197C:p.G66A,ENSG00000029363:ENST00000527759:exon4:c.G191C:p.G64A,ENSG00000029363:ENST00000529826:exon4:c.G197C:p.G66A,ENSG00000029363:ENST00000530429:exon4:c.G191C:p.G64A,ENSG00000029363:ENST00000530767:exon4:c.G197C:p.G66A,ENSG00000029363:ENST00000531224:exon4:c.G197C:p.G66A,ENSG00000029363:ENST00000532384:exon4:c.G197C:p.G66A,ENSG00000029363:ENST00000534269:exon4:c.G191C:p.G64A	Score=741;Name=lod=1365	NA	6q23.3	Score=877;Name=V$TST1_01	NA	Name=2	NA	rs9942517	0.5	0.5	0.46	0	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.4999	0.5	0.09	T	0.999	D	0.992	D	0.000	D	0.000	P	1.79	L	0.12	T	-0.334	T	0.400	T	0.91	3.166	16.59	5.64	2.660	5.655	19.699	3.165888	3.165888	0	NA	NA	NA	0.5	NA	15.8334334
138	1	144918957	144918957	T	A	exonic	PDE4DIP	NA	nonsynonymous SNV	PDE4DIP:NM_001002811:exon6:c.A1718T:p.E573V,PDE4DIP:NM_001002812:exon10:c.A1229T:p.E410V,PDE4DIP:NM_001198834:exon10:c.A1229T:p.E410V,PDE4DIP:NM_014644:exon10:c.A1229T:p.E410V,PDE4DIP:NM_001198832:exon13:c.A1427T:p.E476V	exonic	ENSG00000178104	NA	nonsynonymous SNV	ENSG00000178104:ENST00000313431:exon6:c.A1718T:p.E573V,ENSG00000178104:ENST00000479408:exon6:c.A590T:p.E197V,ENSG00000178104:ENST00000529945:exon6:c.A1718T:p.E573V,ENSG00000178104:ENST00000369349:exon10:c.A1229T:p.E410V,ENSG00000178104:ENST00000369351:exon10:c.A1229T:p.E410V,ENSG00000178104:ENST00000369354:exon10:c.A1229T:p.E410V,ENSG00000178104:ENST00000369356:exon10:c.A1229T:p.E410V,ENSG00000178104:ENST00000313382:exon13:c.A1427T:p.E476V,ENSG00000178104:ENST00000369359:exon13:c.A1640T:p.E547V,ENSG00000178104:ENST00000530740:exon13:c.A1640T:p.E547V	Score=393;Name=lod=53	NA	1q21.1	NA	NA	NA	NA	rs1061308	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	0	D	1.0	D	0.998	D	.	.	1.000	D	1.935	M	4.41	T	-1.092	T	0.075	T	0.591	4.482	24	5.64	2.144	6.310	13.796	4.482075	4.482075	0	NA	NA	NA	0.5	NA	15.8333334
138	10	82363337	82363337	C	T	exonic	SH2D4B	NA	nonsynonymous SNV	SH2D4B:NM_001145719:exon5:c.C499T:p.R167C,SH2D4B:NM_207372:exon5:c.C646T:p.R216C	exonic	ENSG00000178217	NA	nonsynonymous SNV	ENSG00000178217:ENST00000313455:exon5:c.C499T:p.R167C,ENSG00000178217:ENST00000339284:exon5:c.C646T:p.R216C,ENSG00000178217:ENST00000470604:exon5:c.C643T:p.R215C	Score=361;Name=lod=39	NA	10q23.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	NA	0.05	D	0.581	P	0.123	B	0.000	N	1.000	D	2.24	M	1.97	T	-1.087	T	0.059	T	0.554	3.44	17.64	5.12	1.567	3.181	12.934	3.43968	3.43968	0.08	NA	NA	NA	NA	NA	15.8333334
138	11	48346932	48346932	G	A	exonic	OR4C3	NA	nonsynonymous SNV	OR4C3:NM_001004702:exon1:c.G440A:p.R147H	exonic	ENSG00000176547	NA	nonsynonymous SNV	ENSG00000176547:ENST00000319856:exon1:c.G440A:p.R147H	Score=557;Name=lod=244	NA	11p11.2	Score=740;Name=V$PPARG_01	NA	NA	NA	rs80285195	NA	NA	NA	0.00279553	NA	NA	0.0014	0.0068	0.0041	NA	NA	NA	NA	0.5	0.21	0.03	D	0.007	B	0.013	B	0.002	N	0.999	D	3.42	M	-1.1	T	-0.029	T	0.547	D	0.359	3.598	18.32	5.78	2.782	6.507	17.680	3.598179	3.598179	0.06	NA	NA	NA	0.196	NA	15.8333334
138	1	36755247	36755247	G	A	exonic	THRAP3	NA	nonsynonymous SNV	THRAP3:NM_005119:exon5:c.G1627A:p.E543K	exonic	ENSG00000054118	NA	nonsynonymous SNV	ENSG00000054118:ENST00000354618:exon5:c.G1627A:p.E543K,ENSG00000054118:ENST00000469141:exon6:c.G1627A:p.E543K	Score=512;Name=lod=160	NA	1p34.3	Score=739;Name=V$SEF1_C	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0000083	NA	0.08	T	0.486	P	0.356	B	0.000	D	1.000	D	1.525	L	2.55	T	-1.178	T	0.052	T	0.491	3.876	19.69	6.06	2.882	7.827	19.609	3.875563	3.875563	0.01	NA	NA	NA	NA	NA	15.8333251
138	14	105413326	105413326	G	A	exonic	AHNAK2	NA	nonsynonymous SNV	AHNAK2:NM_138420:exon7:c.C8462T:p.P2821L	exonic	ENSG00000185567	NA	nonsynonymous SNV	ENSG00000185567:ENST00000333244:exon7:c.C8462T:p.P2821L	Score=431;Name=lod=75	NA	14q32.33	NA	NA	NA	NA	rs369899617	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00004142	0.0003	0.01	D	0.998	D	0.827	P	.	.	1.000	D	3.64	H	4.6	T	-0.969	T	0.038	T	0.287	2.279	13.58	3.64	1.581	4.333	14.976	2.278753	2.278753	0	0	0.000254	ID=COSM953891;OCCURENCE=1(endometrium)	NA	NA	15.833292
138	10	5011081	5011081	A	T	exonic	AKR1C1	NA	nonsynonymous SNV	AKR1C1:NM_001353:exon5:c.A515T:p.Q172L	exonic	ENSG00000187134	NA	nonsynonymous SNV	ENSG00000187134:ENST00000380859:exon5:c.A521T:p.Q174L,ENSG00000187134:ENST00000380872:exon5:c.A515T:p.Q172L,ENSG00000187134:ENST00000434459:exon10:c.A515T:p.Q172L	Score=487;Name=lod=127	NA	10p15.1	Score=959;Name=V$MYOD_Q6	Name=Pol2	NA	NA	rs11474	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00006589	NA	0.05	D	0.111	B	0.448	P	0.006	N	0.999	D	1.405	L	1.79	T	-0.913	T	0.178	T	0.699	1.79	11.95	2.1	1.209	4.413	8.103	1.79043	1.79043	0.04	NA	NA	NA	NA	NA	15.8332675
138	12	56629033	56629033	C	T	exonic	SLC39A5	NA	nonsynonymous SNV	SLC39A5:NM_001135195:exon5:c.C727T:p.R243W,SLC39A5:NM_173596:exon7:c.C727T:p.R243W	exonic	ENSG00000139540	NA	nonsynonymous SNV	ENSG00000139540:ENST00000266980:exon5:c.C727T:p.R243W,ENSG00000139540:ENST00000436633:exon7:c.C640T:p.R214W,ENSG00000139540:ENST00000454355:exon7:c.C727T:p.R243W	Score=615;Name=lod=421	NA	12q13.3	NA	NA	NA	NA	rs147133811	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00008886	0.0007	0	D	0.998	D	0.88	P	0.008	N	0.994	D	2.18	M	0.74	T	-0.148	T	0.388	T	0.478	3.387	17.43	4.44	2.420	3.808	16.703	3.38651	3.38651	0	0	0.000681	NA	NA	NA	15.8332445
138	1	232942679	232942679	T	C	exonic	MAP10	NA	nonsynonymous SNV	MAP10:NM_019090:exon1:c.T1910C:p.L637P	exonic	ENSG00000212916	NA	nonsynonymous SNV	ENSG00000212916:ENST00000418460:exon1:c.T1910C:p.L637P	Score=265;Name=lod=16	NA	1q42.2	NA	NA	NA	NA	rs202096626	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0005	0.0006	0	D	0.998	D	0.9	P	0.008	U	1.000	D	2.175	M	.	.	-0.370	T	0.324	T	0.948	3.052	16.19	4.87	2.291	4.898	11.556	3.051735	3.051735	0	0.000613	0	NA	NA	NA	15.8322204
138	1	36553609	36553609	G	A	exonic	TEKT2	NA	nonsynonymous SNV	TEKT2:NM_014466:exon10:c.G1115A:p.R372Q	exonic	ENSG00000092850	NA	nonsynonymous SNV	ENSG00000092850:ENST00000207457:exon10:c.G1115A:p.R372Q	Score=539;Name=lod=207	NA	1p34.3	NA	Name=Max	Name=5	NA	rs141119805	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0007	0.0007	0.39	T	0.997	D	0.728	P	0.003	N	0.987	D	1.305	L	4.31	T	-0.823	T	0.017	T	0.348	4.411	23.4	4.95	2.266	2.984	17.793	4.411327	4.411327	0.59	0.000698	0	NA	NA	NA	15.8319354
138	17	44249199	44249199	T	G	exonic	KANSL1	NA	nonsynonymous SNV	KANSL1:NM_001193466:exon2:c.A311C:p.K104T,KANSL1:NM_015443:exon2:c.A311C:p.K104T,KANSL1:NM_001193465:exon3:c.A311C:p.K104T	exonic	ENSG00000120071	NA	nonsynonymous SNV	ENSG00000120071:ENST00000432791:exon1:c.A311C:p.K104T,ENSG00000120071:ENST00000575318:exon1:c.A311C:p.K104T,ENSG00000120071:ENST00000262419:exon2:c.A311C:p.K104T,ENSG00000120071:ENST00000571698:exon2:c.A311C:p.K104T,ENSG00000120071:ENST00000572904:exon2:c.A311C:p.K104T,ENSG00000120071:ENST00000574590:exon2:c.A311C:p.K104T,ENSG00000120071:ENST00000574655:exon3:c.A311C:p.K104T	Score=827;Name=lod=3069	NA	17q21.31	NA	NA	NA	NA	rs17585974	0.1	0.1	0.081	0.0726837	0.1998	0.001	0.1398	0.0113	0.0511	0.19	0.0017	0.16	0.02	0.1204	0.19	0	D	0.999	D	0.996	D	0.000	D	1.000	D	0.895	L	1.73	T	-1.162	T	0.000	T	0.655	3.414	17.53	5.87	2.244	6.677	13.665	3.413865	3.413865	0	0.183256	0.038357	NA	0.051	NA	15.8298774
138	17	39633354	39633354	C	T	exonic	KRT35	NA	nonsynonymous SNV	KRT35:NM_002280:exon7:c.G1322A:p.C441Y	exonic	ENSG00000197079	NA	nonsynonymous SNV	ENSG00000197079:ENST00000246639:exon7:c.G1232A:p.C411Y,ENSG00000197079:ENST00000393989:exon7:c.G1322A:p.C441Y	Score=378;Name=lod=46	NA	17q21.2	Score=834;Name=V$CHOP_01	NA	NA	NA	rs12451652	0.17	0.17	0.156	0.173922	0.172	0.2956	0.1225	0.0741	0.2219	0.17	0.29	0.14	0.07	0.1635	0.29	0.01	D	0.011	B	0.022	B	0.000	D	0.163	P	2.685	M	-1.6	D	-1.060	T	0.000	T	0.221	2.096	12.96	4.43	1.496	1.906	11.993	2.095527	2.095527	0	0.169251	0.090627	NA	0.123	NA	15.8285824
138	14	91357007	91357007	C	T	exonic	RPS6KA5	NA	nonsynonymous SNV	RPS6KA5:NM_004755:exon14:c.G1660A:p.D554N	exonic	ENSG00000100784	NA	nonsynonymous SNV	ENSG00000100784:ENST00000261991:exon14:c.G1660A:p.D554N,ENSG00000100784:ENST00000536315:exon14:c.G1423A:p.D475N	Score=563;Name=lod=258	NA	14q32.11	NA	NA	NA	NA	rs55911249	0.0005	0.0005	0.001	0.000998403	0.002	NA	0.0043	NA	NA	NA	NA	0.0028	NA	0.0021	0.0028	0.04	D	0.994	D	0.831	P	0.000	D	1.000	D	1.005	L	-0.08	T	-0.481	T	0.300	T	0.135	5	29.4	5.45	2.535	7.780	19.284	4.999614	4.999614	0.08	0.001977	0.000681	NA	NA	NA	15.8272564
138	15	74219582	74219582	G	A	exonic	LOXL1	NA	nonsynonymous SNV	LOXL1:NM_005576:exon1:c.G458A:p.G153D	exonic	ENSG00000129038	NA	nonsynonymous SNV	ENSG00000129038:ENST00000261921:exon1:c.G458A:p.G153D,ENSG00000129038:ENST00000566011:exon1:c.G458A:p.G153D	Score=614;Name=lod=419	Name=Glaucoma (exfoliation)	15q24.1	Score=929;Name=V$ZIC3_01	Name=Pol2,c-Myc	Name=31	NA	rs3825942	0.22	0.22	0.204	0.247604	0.1769	0.1399	0.1686	0.41	0.2679	0.18	0.14	0.2	0.41	0.1849	0.41	0.2	T	0.001	B	0.002	B	0.007	N	0.012	P	1.245	L	1.43	T	-0.936	T	0.000	T	0.385	3.674	18.67	3.17	1.818	2.700	5.508	3.673592	3.673592	0	0.145302	0.36097	NA	0.007	CLINSIG=other;CLNDBN=Exfoliation_syndrome\x2c_susceptibility_to;CLNREVSTAT=single;CLNACC=RCV000015435.1;CLNDSDB=.;CLNDSDBID=.	15.8262314
139	11	58170712	58170712	C	T	exonic	OR5B3	NA	nonsynonymous SNV	OR5B3:NM_001005469:exon1:c.G171A:p.M57I	exonic	ENSG00000172769	NA	nonsynonymous SNV	ENSG00000172769:ENST00000309403:exon1:c.G171A:p.M57I	Score=468;Name=lod=106	NA	11q12.1	NA	NA	NA	NA	rs138976101	0.0027	0.0027	0.003	0.000998403	0.005	NA	NA	NA	NA	0.01	NA	NA	NA	0.0029	0.01	0	D	0.98	D	0.782	P	0.016	N	0.998	D	3.945	H	2.99	T	-0.705	T	0.084	T	0.412	3.179	16.64	4.19	2.338	4.651	15.583	3.17872	3.17872	0	0.005122	0.001817	NA	NA	NA	15.8203114
140	10	73055607	73055607	G	A	exonic	UNC5B	NA	nonsynonymous SNV	UNC5B:NM_001244889:exon13:c.G2182A:p.V728M,UNC5B:NM_170744:exon14:c.G2215A:p.V739M	exonic	ENSG00000107731	NA	nonsynonymous SNV	ENSG00000107731:ENST00000373192:exon13:c.G2182A:p.V728M,ENSG00000107731:ENST00000335350:exon14:c.G2215A:p.V739M	Score=613;Name=lod=412	NA	10q22.1	Score=885;Name=V$ZID_01	NA	NA	NA	rs61749231	0.0037	0.0037	NA	0.00319489	0.006	NA	0.0086	NA	0.0041	0.004	NA	0.01	NA	0.0044	0.01	0.04	D	0.934	P	0.208	B	0.000	D	0.989	D	0.55	N	0.85	T	-1.066	T	0.048	T	0.207	2.069	12.87	3.76	2.437	1.640	9.707	2.068509	2.068509	0.05	0.008605	0.001589	NA	0.007	NA	15.8143284
140	1	216108128	216108128	T	C	exonic	USH2A	NA	nonsynonymous SNV	USH2A:NM_206933:exon38:c.A7130G:p.N2377S	exonic	ENSG00000042781	NA	nonsynonymous SNV	ENSG00000042781:ENST00000307340:exon38:c.A7130G:p.N2377S,ENSG00000042781:ENST00000366943:exon38:c.A7130G:p.N2377S	Score=374;Name=lod=44	NA	1q41	NA	NA	NA	NA	rs111033394	0.0041	0.0041	NA	0.00299521	0.0119	NA	0.0043	NA	NA	0.01	NA	0.0028	NA	0.0038	0.01	0.3	T	0.919	P	0.375	B	0.000	D	1.000	D	2.125	M	2.71	T	-0.994	T	0.031	T	0.111	3.126	16.45	5.81	2.210	3.793	12.071	3.125586	3.125586	0.09	0.004537	0.00227	NA	NA	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000041903.1;CLNDSDB=.;CLNDSDBID=.	15.8130964
140	10	90429652	90429652	A	G	exonic	LIPF	NA	nonsynonymous SNV	LIPF:NM_001198828:exon5:c.A382G:p.T128A,LIPF:NM_004190:exon5:c.A481G:p.T161A,LIPF:NM_001198829:exon6:c.A511G:p.T171A,LIPF:NM_001198830:exon6:c.A412G:p.T138A	exonic	ENSG00000182333	NA	nonsynonymous SNV	ENSG00000182333:ENST00000238983:exon5:c.A481G:p.T161A,ENSG00000182333:ENST00000355843:exon6:c.A382G:p.T128A,ENSG00000182333:ENST00000394375:exon6:c.A511G:p.T171A	Score=374;Name=lod=44	NA	10q23.31	NA	NA	NA	NA	rs814628	0.17	0.17	0.161	0.167931	0.174	0.3056	0.2046	0.0098	0.2076	0.18	0.31	0.16	0.01	0.1759	0.31	0	D	0.995	D	0.954	D	0.000	D	0.000	P	3.805	H	0.06	T	-1.153	T	0.000	T	0.43	3.665	18.63	5.24	2.194	8.620	14.264	3.665012	3.665012	0.01	0.175581	0.045166	NA	0.087	NA	15.8078524
140	10	81372166	81372166	C	G	exonic	SFTPA1	NA	nonsynonymous SNV	SFTPA1:NM_001164647:exon3:c.C271G:p.P91A,SFTPA1:NM_001093770:exon4:c.C316G:p.P106A,SFTPA1:NM_001164644:exon4:c.C271G:p.P91A,SFTPA1:NM_001164645:exon4:c.C169G:p.P57A,SFTPA1:NM_001164646:exon4:c.C124G:p.P42A,SFTPA1:NM_005411:exon4:c.C271G:p.P91A	exonic	ENSG00000122852	NA	nonsynonymous SNV	ENSG00000122852:ENST00000372313:exon2:c.C94G:p.P32A,ENSG00000122852:ENST00000428376:exon3:c.C271G:p.P91A,ENSG00000122852:ENST00000429958:exon3:c.C271G:p.P91A,ENSG00000122852:ENST00000372308:exon4:c.C271G:p.P91A,ENSG00000122852:ENST00000398636:exon4:c.C271G:p.P91A,ENSG00000122852:ENST00000419470:exon4:c.C316G:p.P106A,ENSG00000122852:ENST00000439264:exon4:c.C271G:p.P91A	Score=363;Name=lod=40	NA	10q22.3	NA	Name=ZNF263	NA	NA	rs1136452	0.0046	0.0046	NA	0.00539137	0.008	NA	0.0014	0.0113	0.0031	0.01	NA	0.0028	0.01	0.0072	0.014	0.16	T	0.972	D	0.673	P	0.015	N	0.817	N	0.9	L	-3.16	D	0.040	D	0.612	D	0.418	0.847	8.424	2.73	1.840	0.938	9.116	0.847037	NA	0.1	0.01094	0.013845	NA	NA	NA	15.8071934
141	19	55693469	55693469	C	T	exonic	PTPRH	NA	nonsynonymous SNV	PTPRH:NM_001161440:exon17:c.G2579A:p.R860Q,PTPRH:NM_002842:exon19:c.G3113A:p.R1038Q	exonic	ENSG00000080031	NA	nonsynonymous SNV	ENSG00000080031:ENST00000263434:exon17:c.G2579A:p.R860Q,ENSG00000080031:ENST00000376350:exon19:c.G3113A:p.R1038Q	Score=500;Name=lod=143	NA	19q13.42	Score=959;Name=V$MYOD_Q6	NA	NA	NA	rs45541434	0.01	0.01	0.004	0.00519169	0.0119	NA	0.013	0.0008	0.0041	0.01	NA	0.02	0.002	0.0075	0.02	0.99	T	0.975	D	0.655	P	0.004	N	0.521	D	-0.45	N	-1.59	D	-0.594	T	0.154	T	0.114	3.685	18.72	3.82	1.196	1.793	8.962	3.684827	3.684827	0.21	0.009186	0.003404	NA	0.007	NA	15.8047474
142	15	52536596	52536596	C	T	exonic	MYO5C	NA	nonsynonymous SNV	MYO5C:NM_018728:exon19:c.G2347A:p.A783T	exonic	ENSG00000128833	NA	nonsynonymous SNV	ENSG00000128833:ENST00000261839:exon19:c.G2347A:p.A783T	Score=284;Name=lod=19	NA	15q21.2	NA	Name=ELF1_(SC-631)	NA	NA	rs55712142	0.04	0.04	0.026	0.0339457	0.0099	0.1002	0.0375	NA	0.0337	0.01	0.11	0.03	NA	0.0224	0.11	0.5	T	0.788	P	0.126	B	0.000	D	1.000	D	1.855	L	-3.82	D	-0.408	T	0.066	T	0.684	3.927	19.98	5.07	2.634	5.616	18.241	3.926667	3.926667	0.46	0.009631	0.003122	NA	0.022	NA	15.7914024
143	11	123777302	123777302	T	G	exonic	OR8D4	NA	nonsynonymous SNV	OR8D4:NM_001005197:exon1:c.T164G:p.L55R	exonic	ENSG00000181518	NA	nonsynonymous SNV	ENSG00000181518:ENST00000321355:exon1:c.T164G:p.L55R	Score=284;Name=lod=19	NA	11q24.1	NA	NA	NA	NA	rs17127947	0.19	0.19	0.197	0.186502	0.1829	0.0933	0.1455	0.2844	0.183	0.19	0.13	0.16	0.27	0.1772	0.27	0	D	1.0	D	0.992	D	0.001	D	0.000	P	4.335	H	2.48	T	-1.019	T	0.000	T	0.394	2.926	15.75	5.67	2.143	7.872	14.889	2.926498	2.926498	0	0.190277	0.245459	ID=COSM147343;OCCURENCE=1(stomach)	0.196	NA	15.7829564
143	15	90144615	90144615	T	C	exonic	TICRR	NA	nonsynonymous SNV	TICRR:NM_152259:exon10:c.T2240C:p.V747A	exonic	ENSG00000140534	NA	nonsynonymous SNV	ENSG00000140534:ENST00000268138:exon10:c.T2240C:p.V747A,ENSG00000140534:ENST00000560985:exon10:c.T2237C:p.V746A	Score=412;Name=lod=63	NA	15q26.1	NA	NA	NA	NA	rs12905387	0.01	0.01	0.004	0.00658946	0.0209	0.001	0.0086	NA	0.0051	0.02	NA	0.01	NA	0.011	0.02	0.01	D	0.972	D	0.673	P	0.025	N	0.906	D	2.095	M	1.81	T	-0.991	T	0.053	T	0.341	3.243	16.87	4.39	1.006	3.500	10.819	3.242645	3.242645	0.02	0.019551	0.003363	NA	NA	NA	15.7818824
143	13	41323397	41323397	C	T	exonic	MRPS31	NA	nonsynonymous SNV	MRPS31:NM_005830:exon6:c.G835A:p.D279N	exonic	ENSG00000102738	NA	nonsynonymous SNV	ENSG00000102738:ENST00000323563:exon6:c.G835A:p.D279N	Score=483;Name=lod=123	NA	13q14.11	Score=951;Name=V$LYF1_01	NA	NA	NA	rs13508	0.14	0.14	0.129	0.166933	0.1839	0.0675	0.2061	0.1278	0.2771	0.19	0.06	0.19	0.13	0.1933	0.19	0.02	D	0.999	D	0.951	D	0.000	D	0.000	P	1.87	L	1.47	T	-1.203	T	0.000	T	0.032	4.631	25.4	5.17	2.406	6.719	17.260	4.631462	4.631462	0.02	0.177907	0.128234	NA	0.109	NA	15.7782264
143	18	13826391	13826391	C	G	exonic	MC5R	NA	nonsynonymous SNV	MC5R:NM_005913:exon1:c.C627G:p.F209L	exonic	ENSG00000176136	NA	nonsynonymous SNV	ENSG00000176136:ENST00000324750:exon1:c.C627G:p.F209L	Score=495;Name=lod=137	NA	18p11.21	Score=793;Name=V$MYOGNF1_01	NA	NA	NA	rs2236700	0.27	0.27	0.256	0.265375	0.172	0.3433	0.3573	0.3154	0.1483	0.17	0.37	0.3	0.29	0.2071	0.37	0.61	T	1.0	D	0.996	D	0.000	D	0.000	P	2.51	M	1.35	T	-0.949	T	0.000	T	0.479	3.736	18.97	3.18	1.086	1.790	10.588	3.736421	3.736421	NA	0.178721	0.29596	NA	0.196	NA	15.7755124
144	11	48239182	48239182	C	A	exonic	OR4B1	NA	nonsynonymous SNV	OR4B1:NM_001005470:exon1:c.C821A:p.T274K	exonic	ENSG00000175619	NA	nonsynonymous SNV	ENSG00000175619:ENST00000309562:exon1:c.C821A:p.T274K	Score=366;Name=lod=41	NA	11p11.2	NA	NA	NA	NA	rs7130086	0.21	0.21	0.204	0.262181	0.174	0.3869	0.1844	0.1293	0.4591	0.19	0.34	0.18	0.14	0.2177	0.34	0	D	0.994	D	0.952	D	0.000	D	0.477	P	4.1	H	8.39	T	-1.047	T	0.000	T	0.299	2.185	13.26	4.63	1.347	1.092	12.482	2.184673	2.184673	0	0.169846	0.140845	NA	0.196	NA	15.7717874
145	1	118644524	118644524	T	A	exonic	SPAG17	NA	nonsynonymous SNV	SPAG17:NM_206996:exon5:c.A473T:p.E158V	exonic	ENSG00000155761	NA	nonsynonymous SNV	ENSG00000155761:ENST00000336338:exon5:c.A473T:p.E158V	Score=343;Name=lod=33	NA	1p12	NA	NA	NA	NA	rs17185492	0.14	0.14	0.112	0.115815	0.2078	0.1329	0.147	0.0212	0.1094	0.22	0.12	0.17	0.01	0.167	0.22	0.01	D	1.0	D	0.998	D	0.000	D	0.535	P	2.19	M	-0.0	T	-0.261	T	0.338	T	0.245	3.735	18.97	5.39	2.168	3.050	13.067	3.734811	3.734811	0.14	0.199302	0.049705	ID=COSM1178400;OCCURENCE=1(prostate)	0.116	NA	15.7592314
146	17	6513329	6513329	G	A	exonic	KIAA0753	NA	nonsynonymous SNV	KIAA0753:NM_014804:exon9:c.C1697T:p.P566L	exonic	ENSG00000198920	NA	nonsynonymous SNV	ENSG00000198920:ENST00000589033:exon2:c.C65T:p.P22L,ENSG00000198920:ENST00000542606:exon7:c.C800T:p.P267L,ENSG00000198920:ENST00000572370:exon8:c.C800T:p.P267L,ENSG00000198920:ENST00000361413:exon9:c.C1697T:p.P566L	Score=409;Name=lod=61	NA	17p13.1	NA	NA	Name=7	NA	rs2304977	0.28	0.28	0.252	0.271765	0.3459	0.3562	0.3876	0.0303	0.3528	0.34	0.31	0.41	0.04	0.3575	0.41	0.31	T	0.979	D	0.747	P	0.000	D	0.000	P	2.43	M	-2.02	D	-1.136	T	0.000	T	0.315	3.689	18.74	4.15	1.275	2.037	11.292	3.688818	3.688818	0	0.37573	0.085302	NA	0.232	NA	15.7542034
146	11	46893108	46893108	T	C	exonic	LRP4	NA	nonsynonymous SNV	LRP4:NM_002334:exon31:c.A4660G:p.S1554G	exonic	ENSG00000134569	NA	nonsynonymous SNV	ENSG00000134569:ENST00000378623:exon31:c.A4660G:p.S1554G	Score=617;Name=lod=429	Name=D-dimer levels	11p11.2	Score=906;Name=V$AP1_Q2	NA	NA	NA	rs2306029	0.35	0.35	0.322	0.367612	0.5417	0.2569	0.4841	0.1142	0.5624	0.53	0.27	0.45	0.11	0.4942	0.54	0.04	D	0.233	B	0.3	B	0.000	D	0.000	P	2.015	M	-3.81	D	-1.117	T	0.000	T	0.353	3.634	18.48	5.81	2.210	7.437	12.391	3.633739	3.633739	0.16	0.543266	0.194911	NA	0.478	NA	15.7541674
146	11	46886077	46886077	A	T	exonic	LRP4	NA	nonsynonymous SNV	LRP4:NM_002334:exon36:c.T5165A:p.L1722H	exonic	ENSG00000134569	NA	nonsynonymous SNV	ENSG00000134569:ENST00000378623:exon36:c.T5165A:p.L1722H	Score=508;Name=lod=155	NA	11p11.2	NA	NA	NA	NA	rs117936904	0.02	0.02	0.015	0.0121805	0.0408	NA	0.0202	0.0015	0.0041	0.04	NA	0.02	0.002	0.0186	0.04	0.48	T	0.992	D	0.707	P	0.000	D	1.000	D	0.695	N	-2.76	D	-0.212	T	0.304	T	0.462	4.265	22.3	5.99	2.291	6.753	14.736	4.265248	4.265248	0.01	0.022098	0.004543	NA	NA	NA	15.7518354
147	2	170060603	170060603	T	C	exonic	LRP2	NA	nonsynonymous SNV	LRP2:NM_004525:exon42:c.A7894G:p.N2632D	exonic	ENSG00000081479	NA	nonsynonymous SNV	ENSG00000081479:ENST00000263816:exon42:c.A7894G:p.N2632D	Score=278;Name=lod=18	NA	2q31.1	NA	Name=FOXA1_(C-20),GATA3_(SC-268),ERalpha_a,FOXA2_(SC-6554)	Name=4	NA	rs17848169	0.02	0.02	0.019	0.0171725	0.0398	0.0129	0.0115	0.0015	0.0235	0.04	0.01	0.01	0.002	0.0295	0.04	0.87	T	0.514	P	0.053	B	0.007	N	1.000	D	0.815	L	-2.73	D	-0.588	T	0.166	T	0.023	-0.501	1.705	3.13	0.374	2.342	12.377	-0.50059	NA	0.74	0.037442	0.007036	NA	0.007	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117548.2;CLNDSDB=.;CLNDSDBID=.	15.7265914
147	7	143633157	143633157	T	C	exonic	OR2F2	NA	nonsynonymous SNV	OR2F2:NM_001004685:exon1:c.T832C:p.Y278H	exonic	ENSG00000221910	NA	nonsynonymous SNV	ENSG00000221910:ENST00000408955:exon1:c.T832C:p.Y278H	Score=265;Name=lod=16	NA	7q35	NA	NA	NA	NA	rs13235235	0.17	0.17	0.169	0.165535	0.2028	0.002	0.1657	0.3464	0.0511	0.19	NA	0.19	0.32	0.1816	0.33	0	D	1.0	D	0.999	D	0.001	D	0.963	P	3.185	M	8.11	T	-0.948	T	0.000	T	0.081	1.14	9.646	3.57	1.626	4.377	10.420	1.140355	NA	0.01	0.223657	0.333181	NA	0.239	NA	15.7252764
148	19	38055612	38055612	A	T	exonic	ZNF571	NA	nonsynonymous SNV	ZNF571:NM_016536:exon4:c.T1718A:p.L573H	exonic	ENSG00000180479	NA	nonsynonymous SNV	ENSG00000180479:ENST00000328550:exon4:c.T1718A:p.L573H,ENSG00000180479:ENST00000451802:exon4:c.T1718A:p.L573H,ENSG00000180479:ENST00000593133:exon4:c.T1718A:p.L573H,ENSG00000180479:ENST00000358744:exon5:c.T1718A:p.L573H	NA	NA	19q13.12	NA	Name=KAP1,ZNF274,SETDB1	Name=4	NA	rs4802029	0.36	0.36	0.356	0.368211	0.168	0.6528	0.2637	0.3555	0.3722	0.17	0.65	0.25	0.41	0.2613	0.65	0.01	D	1.0	D	1.0	D	.	.	0.000	P	4.02	H	0.59	T	-0.888	T	0.000	T	0.468	3.364	17.34	3.78	1.556	4.732	11.596	3.363795	3.363795	0.02	0.185581	0.315252	NA	0.297	NA	15.7184524
149	19	10085054	10085054	G	A	exonic	COL5A3	NA	nonsynonymous SNV	COL5A3:NM_015719:exon46:c.C3373T:p.P1125S	exonic	ENSG00000080573	NA	nonsynonymous SNV	ENSG00000080573:ENST00000264828:exon46:c.C3373T:p.P1125S	Score=538;Name=lod=205	NA	19p13.2	Score=920;Name=V$NFKAPPAB50_01	NA	NA	NA	rs3815745	0.18	0.18	0.17	0.145966	0.2078	0.2202	0.1282	0.0688	0.1227	0.21	0.25	0.14	0.08	0.1939	0.25	0.62	T	0.993	D	0.953	D	0.000	D	0.030	P	1.075	L	-3.8	D	-1.025	T	0.001	T	0.109	4.047	20.8	4.89	2.246	6.794	15.533	4.046628	4.046628	0.15	0.226628	0.090331	NA	0.145	NA	15.7050054
150	18	72176083	72176083	T	C	exonic	CNDP2	NA	nonsynonymous SNV	CNDP2:NM_018235:exon5:c.T376C:p.Y126H	exonic	ENSG00000133313	NA	nonsynonymous SNV	ENSG00000133313:ENST00000580672:exon3:c.T322C:p.Y108H,ENSG00000133313:ENST00000582666:exon3:c.T247C:p.Y83H,ENSG00000133313:ENST00000583785:exon4:c.T376C:p.Y126H,ENSG00000133313:ENST00000324262:exon5:c.T376C:p.Y126H,ENSG00000133313:ENST00000579847:exon5:c.T376C:p.Y126H,ENSG00000133313:ENST00000581272:exon5:c.T376C:p.Y126H,ENSG00000133313:ENST00000582589:exon5:c.T376C:p.Y126H,ENSG00000133313:ENST00000583216:exon5:c.T376C:p.Y126H	Score=437;Name=lod=80	NA	18q22.3	NA	Name=TAL1_(SC-12984),GATA2_(CG2-96)	NA	NA	rs2278161	0.2	0.2	0.166	0.215855	0.1899	0.3006	0.3156	0.0802	0.2679	0.18	0.3	0.26	0.08	0.2269	0.3	0.01	D	0.535	P	0.778	P	0.000	D	0.000	P	4.02	H	0.61	T	-1.136	T	0.000	T	0.592	2.119	13.04	5.57	2.114	7.629	15.743	2.119143	2.119143	0.01	0.22314	0.118248	ID=COSM148445;OCCURENCE=1(stomach)	0.225	NA	15.6933934
151	22	30888527	30888527	C	T	exonic	SEC14L4	NA	nonsynonymous SNV	SEC14L4:NM_001161368:exon8:c.G598A:p.V200M,SEC14L4:NM_174977:exon8:c.G598A:p.V200M	exonic	ENSG00000133488	NA	nonsynonymous SNV	ENSG00000133488:ENST00000255858:exon8:c.G598A:p.V200M,ENSG00000133488:ENST00000381982:exon8:c.G598A:p.V200M,ENSG00000133488:ENST00000392772:exon8:c.G436A:p.V146M,ENSG00000133488:ENST00000540456:exon9:c.G553A:p.V185M	Score=569;Name=lod=275	NA	22q12.2	Score=831;Name=V$HNF4_01	NA	NA	NA	rs17738540	0.15	0.15	0.144	0.147165	0.2296	0.0397	0.2824	0.1036	0.136	0.22	0.04	0.23	0.12	0.1938	0.23	0.05	D	1.0	D	0.91	D	0.000	D	0.000	P	1.74	L	-1.05	T	-1.106	T	0.000	T	0.448	2.783	15.27	2.76	1.199	1.804	11.461	2.783085	2.783085	0.05	0.225116	0.123014	NA	0.065	NA	15.6848174
152	17	33286664	33286664	A	G	exonic	CCT6B	NA	nonsynonymous SNV	CCT6B:NM_001193529:exon2:c.T143C:p.V48A,CCT6B:NM_001193530:exon2:c.T143C:p.V48A,CCT6B:NM_006584:exon2:c.T143C:p.V48A	exonic	ENSG00000132141	NA	nonsynonymous SNV	ENSG00000132141:ENST00000314144:exon2:c.T143C:p.V48A,ENSG00000132141:ENST00000421975:exon2:c.T143C:p.V48A,ENSG00000132141:ENST00000436961:exon2:c.T143C:p.V48A	Score=604;Name=lod=379	NA	17q12	NA	NA	NA	NA	rs2230552	0.29	0.29	0.277	0.290935	0.2018	0.5278	0.2968	0.1225	0.362	0.2	0.56	0.28	0.13	0.2447	0.56	0	D	0.999	D	0.979	D	0.000	D	0.000	P	4.555	H	-1.39	T	-1.028	T	0.000	T	0.256	4.379	23.1	4.29	1.909	8.208	11.701	4.379366	4.379366	0	0.212674	0.124149	NA	0.232	NA	15.6741594
153	6	100966006	100966006	C	T	exonic	ASCC3	NA	nonsynonymous SNV	ASCC3:NM_006828:exon38:c.G5788A:p.V1930M	exonic	ENSG00000112249	NA	nonsynonymous SNV	ENSG00000112249:ENST00000369162:exon38:c.G5788A:p.V1930M	Score=580;Name=lod=303	NA	6q16.3	NA	NA	NA	NA	rs3213542	0.11	0.11	0.111	0.124002	0.0507	0.1597	0.1081	0.1891	0.0859	0.05	0.13	0.1	0.16	0.0782	0.16	0.03	D	0.975	D	0.819	P	0.000	D	0.000	P	2.86	M	0.09	T	-0.243	T	0.342	T	0.238	4.325	22.7	4.93	2.433	3.942	18.505	4.324912	4.324912	0.03	0.046279	0.152065	NA	0.138	NA	15.6581544
154	13	39266484	39266484	G	A	exonic	FREM2	NA	nonsynonymous SNV	FREM2:NM_207361:exon1:c.G5003A:p.R1668H	exonic	ENSG00000150893	NA	nonsynonymous SNV	ENSG00000150893:ENST00000280481:exon1:c.G5003A:p.R1668H	Score=321;Name=lod=27	NA	13q13.3	NA	NA	NA	NA	rs1868463	0.11	0.11	0.116	0.121206	0.0547	0.246	0.0576	0.053	0.1984	0.05	0.26	0.06	0.07	0.0808	0.26	0.02	D	0.998	D	0.791	P	0.000	D	0.000	P	2.48	M	1.17	T	-1.109	T	0.000	T	0.144	4.295	22.5	4.55	1.284	5.481	14.122	4.295451	4.295451	0.01	0.05093	0.043123	NA	0.08	NA	15.6469034
154	1	118657952	118657952	C	T	exonic	SPAG17	NA	nonsynonymous SNV	SPAG17:NM_206996:exon4:c.G428A:p.R143Q	exonic	ENSG00000155761	NA	nonsynonymous SNV	ENSG00000155761:ENST00000336338:exon4:c.G428A:p.R143Q	Score=289;Name=lod=20	NA	1p12	Score=799;Name=V$E2F_01	NA	NA	NA	rs12133381	0.09	0.09	0.079	0.10603	0.0586	0.2728	0.0346	0.0038	0.1718	0.06	0.23	0.04	0.01	0.074	0.23	0	D	0.681	P	0.102	B	0.000	D	0.995	P	2.395	M	-0.32	T	-0.614	T	0.168	T	0.091	1.868	12.2	5.02	1.522	2.496	14.170	1.867742	1.867742	0.07	0.054535	0.015213	NA	0.022	NA	15.6461984
155	14	57755564	57755564	G	A	exonic	AP5M1	NA	nonsynonymous SNV	AP5M1:NM_018229:exon8:c.G1435A:p.A479T	exonic	ENSG00000053770	NA	nonsynonymous SNV	ENSG00000053770:ENST00000556377:exon2:c.G142A:p.A48T,ENSG00000053770:ENST00000261558:exon8:c.G1435A:p.A479T,ENSG00000053770:ENST00000431972:exon9:c.G1477A:p.A493T	Score=600;Name=lod=366	NA	14q22.3	Score=845;Name=V$TST1_01	NA	NA	NA	rs35759976	0.05	0.05	0.04	0.034345	0.0736	NA	0.1254	0.0023	0.0082	0.07	NA	0.13	0.002	0.0612	0.13	0.01	D	0.773	P	0.321	B	0.000	D	1.000	D	1.79	L	1.4	T	-1.187	T	0.002	T	0.514	5.107	32	5.63	2.814	7.054	20.053	5.106553	5.106553	0.02	0.070995	0.015441	NA	0.022	NA	15.6275384
156	11	116662407	116662407	G	C	exonic	APOA5	NA	nonsynonymous SNV	APOA5:NM_001166598:exon3:c.C56G:p.S19W,APOA5:NM_052968:exon3:c.C56G:p.S19W	exonic	ENSG00000110243	NA	nonsynonymous SNV	ENSG00000110243:ENST00000227665:exon2:c.C56G:p.S19W,ENSG00000110243:ENST00000433069:exon3:c.C56G:p.S19W,ENSG00000110243:ENST00000542499:exon3:c.C56G:p.S19W	NA	NA	11q23.3	NA	NA	Name=2	NA	rs3135506	0.05	0.05	0.03	0.0557109	0.0676	NA	0.1167	0.0673	0.0419	0.06	NA	0.09	0.05	0.079	0.09	0	D	0.993	D	0.823	P	0.827	N	1.000	N	2.075	M	-0.46	T	-0.839	T	0.048	T	0.386	4.007	20.5	5.41	2.826	2.796	14.577	4.006633	4.006633	0	0.064944	0.061109	NA	0.029	CLINSIG=other;CLNDBN=Hypertriglyceridemia\x2c_susceptibility_to;CLNREVSTAT=single;CLNACC=RCV000004653.1;CLNDSDB=.;CLNDSDBID=.	15.6217894
156	19	33517515	33517515	C	T	exonic	RHPN2	NA	nonsynonymous SNV	RHPN2:NM_033103:exon3:c.G209A:p.R70Q	exonic	ENSG00000131941	NA	nonsynonymous SNV	ENSG00000131941:ENST00000254260:exon3:c.G209A:p.R70Q,ENSG00000131941:ENST00000588388:exon3:c.G209A:p.R70Q	Score=629;Name=lod=481	NA	19q13.11	NA	NA	NA	NA	rs28626308	0.08	0.08	0.069	0.116214	0.0596	0.1508	0.0735	0.0575	0.2485	0.06	0.14	0.08	0.05	0.0977	0.14	0.04	D	0.986	D	0.624	P	0.000	D	0.000	P	2.11	M	2.13	T	-1.066	T	0.001	T	0.112	2.367	13.87	2.82	0.953	2.820	11.687	2.366555	2.366555	0.04	0.054302	0.065138	NA	0.072	NA	15.6217314
156	2	118743630	118743630	G	A	exonic	CCDC93	NA	nonsynonymous SNV	CCDC93:NM_019044:exon7:c.C535T:p.R179C	exonic	ENSG00000125633	NA	nonsynonymous SNV	ENSG00000125633:ENST00000319432:exon7:c.C535T:p.R179C,ENSG00000125633:ENST00000376300:exon7:c.C535T:p.R179C	Score=444;Name=lod=85	NA	2q14.1	NA	NA	Name=3	NA	rs33975708	0.06	0.06	0.052	0.0407348	0.0855	NA	0.0706	0.0424	0.0133	0.09	NA	0.08	0.04	0.0568	0.09	0.01	D	0.994	D	0.79	P	0.002	N	0.000	P	2.045	M	0.83	T	-0.894	T	0.013	T	0.191	4.191	21.7	4.81	2.497	3.980	13.251	4.190677	4.190677	0	0.073953	0.047208	NA	0.029	NA	15.6170804
157	17	76200965	76200965	C	T	exonic	AFMID	NA	nonsynonymous SNV	AFMID:NM_001010982:exon6:c.C451T:p.R151W,AFMID:NM_001145526:exon6:c.C451T:p.R151W	exonic	ENSG00000183077	NA	nonsynonymous SNV	ENSG00000183077:ENST00000586542:exon5:c.C365T:p.A122V,ENSG00000183077:ENST00000327898:exon6:c.C451T:p.R151W,ENSG00000183077:ENST00000409257:exon6:c.C451T:p.R151W,ENSG00000183077:ENST00000591256:exon6:c.C451T:p.R151W	Score=304;Name=lod=23	NA	17q25.3	NA	NA	NA	NA	rs72897843	0.05	0.05	0.043	0.0391374	0.0835	0.001	0.0533	0.0068	0.0665	0.1	0.0017	0.07	0.01	0.0656	0.1	0.02	D	0.999	D	0.877	P	0.357	N	1.000	D	2.295	M	2.7	T	-1.224	T	0.003	T	0.125	3.578	18.23	3.89	1.224	4.622	12.491	3.57845	3.57845	0	0.098372	0.021562	NA	0.051	NA	15.5858614
158	X	135956462	135956462	G	C	exonic	RBMX	NA	nonsynonymous SNV	RBMX:NM_002139:exon9:c.C1015G:p.R339G	exonic	ENSG00000147274	NA	nonsynonymous SNV	ENSG00000147274:ENST00000565438:exon7:c.C631G:p.R211G,ENSG00000147274:ENST00000570135:exon8:c.C610G:p.R204G,ENSG00000147274:ENST00000320676:exon9:c.C1015G:p.R339G	Score=861;Name=lod=4226	NA	Xq26.3	Score=878;Name=V$NKX22_01	Name=Pol2-4H8	NA	NA	rs74463481	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2719	0.043	0.01	D	0.889	P	0.319	B	0.000	U	0.000	P	1.845	L	-1.47	T	0.063	D	0.412	T	0.865	1.824	12.06	4.54	1.168	4.693	13.840	1.824057	1.824057	0.04	NA	NA	ID=COSM1636400;OCCURENCE=1(liver)	0.065	NA	15.5614334
159	16	3405986	3405986	G	A	exonic	OR2C1	NA	nonsynonymous SNV	OR2C1:NM_012368:exon1:c.G46A:p.G16S	exonic	ENSG00000168158	NA	nonsynonymous SNV	ENSG00000168158:ENST00000304936:exon1:c.G46A:p.G16S	Score=336;Name=lod=31	NA	16p13.3	NA	NA	NA	NA	rs1218762	0.26	0.26	0.258	0.252596	0.2614	0.1429	0.2435	0.3389	0.2464	0.27	0.14	0.25	0.37	0.2644	0.37	0.02	D	0.998	D	0.922	D	0.001	D	0.005	P	3.72	H	5.96	T	-0.963	T	0.000	T	0.306	2.842	15.47	4.35	2.241	7.449	14.413	2.841769	2.841769	0.01	0.274884	0.345926	NA	0.384	NA	15.5326494
159	6	133045902	133045902	A	G	ncRNA_exonic	VNN3	NA	NA	NA	exonic	ENSG00000093134	NA	nonsynonymous SNV	ENSG00000093134:ENST00000207771:exon6:c.T1043C:p.F348S	Score=363;Name=lod=40	NA	6q23.2	NA	NA	NA	NA	rs2294759	0.27	0.27	0.246	0.269369	0.33	0.2232	0.4135	0.1467	0.318	0.3	0.23	0.4	0.16	0.3168	0.4	0.42	T	1.0	D	0.979	D	0.000	D	0.000	P	.	.	-2.27	D	0.245	D	0.673	D	0.748	3.658	18.6	5.1	2.049	4.686	15.177	3.658274	3.658274	0	0.320693	0.166667	NA	0.203	NA	15.532507
160	11	124294349	124294349	C	A	exonic	OR8B4	NA	nonsynonymous SNV	OR8B4:NM_001005196:exon1:c.G419T:p.C140F	exonic	ENSG00000198657	NA	nonsynonymous SNV	ENSG00000198657:ENST00000356130:exon1:c.G419T:p.C140F	Score=251;Name=lod=14	NA	11q24.2	NA	Name=MafF_(M8194),MafK_(ab50322)	NA	NA	rs7116575	0.15	0.15	0.165	0.160743	0.0875	0.1984	0.111	0.2648	0.092	0.09	0.18	0.08	0.28	0.1185	0.28	0.01	D	0.529	P	0.443	B	0.000	D	0.000	P	3.5	M	8.52	T	-0.903	T	0.000	T	0.325	1.642	11.45	4.62	2.564	2.958	17.603	1.641959	1.641959	0.01	0.107002	0.223989	NA	0.167	NA	15.5203314
160	7	100371417	100371417	G	A	exonic	ZAN	NA	unknown	UNKNOWN	exonic	ENSG00000146839	NA	nonsynonymous SNV	ENSG00000146839:ENST00000538115:exon30:c.G5708A:p.C1903Y,ENSG00000146839:ENST00000542585:exon30:c.G5708A:p.C1903Y,ENSG00000146839:ENST00000546213:exon30:c.G1241A:p.C414Y,ENSG00000146839:ENST00000546292:exon30:c.G5708A:p.C1903Y	Score=340;Name=lod=32	NA	7q22.1	NA	NA	NA	NA	rs12673041	0.07	0.07	0.072	0.107428	0.0368	0.1012	0.0562	0.1528	0.1616	0.03	0.07	0.05	0.16	0.0754	0.16	0	D	1.0	D	0.999	D	0.000	D	0.354	P	3.435	M	0.11	T	-1.124	T	0.083	T	0.647	2.874	15.58	4.56	2.469	5.896	13.539	2.874327	2.874327	NA	0.037787	0.145441	NA	0.036	NA	15.5166797
161	17	40722029	40722029	A	G	exonic	MLX	NA	nonsynonymous SNV	MLX:NM_198205:exon6:c.A416G:p.Q139R,MLX:NM_170607:exon7:c.A668G:p.Q223R,MLX:NM_198204:exon7:c.A506G:p.Q169R	exonic	ENSG00000108788	NA	nonsynonymous SNV	ENSG00000108788:ENST00000346833:exon6:c.A416G:p.Q139R,ENSG00000108788:ENST00000591024:exon6:c.A578G:p.Q193R,ENSG00000108788:ENST00000246912:exon7:c.A668G:p.Q223R,ENSG00000108788:ENST00000435881:exon7:c.A506G:p.Q169R	Score=587;Name=lod=325	NA	17q21.2	NA	NA	Name=8	NA	rs665268	0.29	0.29	0.276	0.321486	0.2654	0.4355	0.2075	0.1952	0.5133	0.28	0.42	0.2	0.22	0.2903	0.42	0.35	T	1.0	D	0.982	D	0.000	D	0.000	P	2.045	M	-1.08	T	-1.047	T	0.000	T	0.121	2.728	15.08	4.65	1.014	7.525	11.437	2.72769	2.72769	0.05	0.273256	0.199047	NA	0.391	NA	15.5043774
162	8	18258103	18258103	G	A	exonic	NAT2	NA	nonsynonymous SNV	NAT2:NM_000015:exon2:c.G590A:p.R197Q	exonic	ENSG00000156006	NA	nonsynonymous SNV	ENSG00000156006:ENST00000286479:exon2:c.G590A:p.R197Q,ENSG00000156006:ENST00000520116:exon2:c.G200A:p.R67Q	Score=369;Name=lod=42	NA	8p22	NA	NA	NA	NA	rs1799930	0.24	0.24	0.245	0.264976	0.2823	0.256	0.1715	0.2375	0.3599	0.28	0.23	0.18	0.26	0.2773	0.29	0.08	T	1.0	D	0.991	D	0.000	D	0.002	P	2.33	M	4.43	T	-0.935	T	0.000	T	0.503	2.204	13.33	2.51	1.706	1.291	8.621	2.204474	2.204474	0.08	0.290349	0.265774	NA	0.261	CLINSIG=drug-response;CLNDBN=Slow_acetylator_due_to_N-acetyltransferase_enzyme_variant;CLNREVSTAT=single;CLNACC=RCV000000758.1;CLNDSDB=MedGen:OMIM:SNOMED_CT;CLNDSDBID=C1827377:243400:425079005	15.4833844
163	1	79357360	79357360	G	C	exonic	ELTD1	NA	nonsynonymous SNV	ELTD1:NM_022159:exon14:c.C1859G:p.A620G	exonic	ENSG00000162618	NA	nonsynonymous SNV	ENSG00000162618:ENST00000401034:exon4:c.C233G:p.A78G,ENSG00000162618:ENST00000370742:exon14:c.C1859G:p.A620G	Score=452;Name=lod=92	NA	1p31.1	NA	NA	Name=2	NA	rs2275902	0.26	0.26	0.268	0.252796	0.3091	0.2312	0.2046	0.2905	0.2004	0.31	0.21	0.23	0.28	0.2663	0.31	.	.	0.999	D	0.992	D	0.000	D	0.000	P	2.84	M	0.78	T	-0.409	T	0.316	T	0.372	4.843	27.6	5.59	2.612	9.835	19.583	4.843199	4.843199	0.02	0.294182	0.260406	NA	0.196	NA	15.4637514
164	4	187004074	187004074	C	T	exonic	TLR3	NA	nonsynonymous SNV	TLR3:NM_003265:exon4:c.C1234T:p.L412F	exonic	ENSG00000164342	NA	nonsynonymous SNV	ENSG00000164342:ENST00000504367:exon2:c.C403T:p.L135F,ENSG00000164342:ENST00000296795:exon4:c.C1234T:p.L412F,ENSG00000164342:ENST00000513189:exon5:c.C1042T:p.L348F	Score=426;Name=lod=72	NA	4q35.1	NA	NA	NA	NA	rs3775291	0.25	0.25	0.221	0.231829	0.3241	0.3284	0.3055	0.0265	0.2628	0.32	0.31	0.3	0.04	0.2712	0.32	0.02	D	1.0	D	1.0	D	0.000	N	0.000	P	4.52	H	0.95	T	-1.355	T	0.000	T	0.481	2.888	15.62	4.95	1.458	4.031	14.798	2.888156	2.888156	0	0.290233	0.071039	ID=COSM149771;OCCURENCE=1(stomach)	0.21	CLINSIG=pathogenic;CLNDBN=Congenital_human_immunodeficiency_virus;CLNREVSTAT=single;CLNACC=RCV000034357.2;CLNDSDB=MedGen:OMIM;CLNDSDBID=C1836230:609423	15.4478004
164	20	18513372	18513372	C	T	exonic	SEC23B	NA	nonsynonymous SNV	SEC23B:NM_001172745:exon11:c.C1298T:p.P433L,SEC23B:NM_001172746:exon11:c.C1244T:p.P415L,SEC23B:NM_006363:exon11:c.C1298T:p.P433L,SEC23B:NM_032985:exon11:c.C1298T:p.P433L,SEC23B:NM_032986:exon11:c.C1298T:p.P433L	exonic	ENSG00000101310	NA	nonsynonymous SNV	ENSG00000101310:ENST00000262544:exon11:c.C1298T:p.P433L,ENSG00000101310:ENST00000336714:exon11:c.C1298T:p.P433L,ENSG00000101310:ENST00000377465:exon11:c.C1298T:p.P433L,ENSG00000101310:ENST00000377475:exon11:c.C1298T:p.P433L	Score=478;Name=lod=117	NA	20p11.23	NA	NA	NA	NA	rs17807673	0.06	0.06	0.057	0.0613019	0.1302	0.003	0.1095	0.0061	0.091	0.13	0.0017	0.09	0.01	0.1122	0.14	0.01	D	0.5	P	0.382	B	0.000	D	0.000	P	3.13	M	-0.91	T	-0.774	T	0.009	T	0.155	3.861	19.62	4.75	2.631	7.109	17.270	3.860872	3.860872	0.01	0.143605	0.030186	NA	0.022	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000081399.1;CLNDSDB=.;CLNDSDBID=.	15.4473284
165	17	56448297	56448297	C	T	exonic	RNF43	NA	nonsynonymous SNV	RNF43:NM_017763:exon3:c.G350A:p.R117H	exonic	ENSG00000108375	NA	nonsynonymous SNV	ENSG00000108375:ENST00000584437:exon2:c.G350A:p.R117H,ENSG00000108375:ENST00000407977:exon3:c.G350A:p.R117H,ENSG00000108375:ENST00000577716:exon3:c.G350A:p.R117H	Score=527;Name=lod=185	Name=Pancreatic cancer	17q22	Score=794;Name=V$PAX5_01	NA	NA	NA	rs2257205	0.19	0.19	0.179	0.226238	0.1163	0.373	0.1009	0.1831	0.3354	0.12	0.35	0.11	0.18	0.1641	0.35	0	D	1.0	D	0.902	P	0.023	N	0.000	P	0.695	N	0.91	T	-0.981	T	0.000	T	0.388	3.863	19.62	5.45	2.555	2.818	7.990	3.86256	3.86256	0	0.108837	0.185202	NA	0.181	NA	15.4440964
166	16	20441053	20441053	C	G	exonic	ACSM5	NA	nonsynonymous SNV	ACSM5:NM_017888:exon8:c.C1055G:p.P352R	exonic	ENSG00000183549	NA	nonsynonymous SNV	ENSG00000183549:ENST00000331849:exon8:c.C1055G:p.P352R	Score=448;Name=lod=88	NA	16p12.3	Score=789;Name=V$PAX2_01	NA	NA	NA	rs8062344	0.44	0.44	0.426	0.439097	0.2813	0.5774	0.2046	0.6846	0.2935	0.3	0.58	0.23	0.67	0.3238	0.67	0	D	0.994	D	0.94	D	0.001	N	0.000	P	2.15	M	0.87	T	-0.906	T	0.000	T	0.261	3.098	16.35	4.44	2.149	6.068	16.206	3.098109	3.098109	0	0.294535	0.60985	NA	0.493	NA	15.4336984
166	22	38877461	38877461	T	G	exonic	KDELR3	NA	nonsynonymous SNV	KDELR3:NM_006855:exon4:c.T596G:p.V199G,KDELR3:NM_016657:exon4:c.T596G:p.V199G	exonic	ENSG00000100196	NA	nonsynonymous SNV	ENSG00000100196:ENST00000216014:exon4:c.T596G:p.V199G,ENSG00000100196:ENST00000409006:exon4:c.T596G:p.V199G	Score=641;Name=lod=539	NA	22q13.1	NA	Name=Pol2(phosphoS2),Pol2,Pol2-4H8	Name=44	NA	rs12004	0.29	0.29	0.296	0.255192	0.3062	0.3542	0.1974	0.1657	0.2628	0.32	0.38	0.22	0.18	0.2884	0.38	0.03	D	0.823	P	0.568	P	0.001	N	0.000	P	2.56	M	-0.96	T	-1.143	T	0.000	T	0.545	3.194	16.69	4.65	1.950	7.868	14.226	3.193945	3.193945	0	0.306279	0.187018	NA	0.261	NA	15.4324544
166	10	126715436	126715436	C	T	exonic	CTBP2	NA	nonsynonymous SNV	CTBP2:NM_022802:exon1:c.G893A:p.R298Q	exonic	ENSG00000175029	NA	nonsynonymous SNV	ENSG00000175029:ENST00000309035:exon1:c.G893A:p.R298Q	Score=333;Name=lod=30	NA	10q26.13	NA	NA	NA	NA	rs3781411	0.12	0.12	0.08	0.122005	0.1352	0.0456	0.2896	0.1089	0.0859	0.13	0.05	0.24	0.1	0.1395	0.24	0	D	0.999	D	0.873	P	0.000	D	0.000	P	.	.	-2.27	D	-1.254	T	0.001	T	0.243	4.25	22.1	3.96	2.423	3.859	14.173	4.249659	4.249659	0	0.131047	0.101906	NA	0.101	NA	15.4275864
167	12	32908237	32908237	C	A	exonic	YARS2	NA	nonsynonymous SNV	YARS2:NM_001040436:exon1:c.G572T:p.G191V	exonic	ENSG00000139131	NA	nonsynonymous SNV	ENSG00000139131:ENST00000324868:exon1:c.G572T:p.G191V,ENSG00000139131:ENST00000548490:exon1:c.G494T:p.G165V	Score=566;Name=lod=266	NA	12p11.21	NA	Name=GABP,Znf143_(16618-1-AP),TAF1,YY1_(C-20),BCLAF1_(M33-P5B11),Pol2(phosphoS2),SMC3_(ab9263),Pol2,PU.1,Rad21,ELF1_(SC-631),Max,GTF2F1_(RAP-74),RXRA,BAF155,CTCF,AP-2alpha,ZNF263,GATA-2,Pol2-4H8,Sin3Ak-20,YY1,CTCF_(SC-5916),CTCF_(C-20),PAX5-N19,PAX5-C20,AP-2gamma,HEY1,c-Myc,CCNT2,TBP,USF-1,TCF12	Name=147	NA	rs11539445	0.13	0.13	0.091	0.126597	0.162	0.0833	0.0937	0.177	0.09	0.16	0.07	0.09	0.17	0.1259	0.17	0.01	D	0.617	P	0.188	B	0.000	D	0.000	P	-0.255	N	0.72	T	-1.067	T	0.000	T	0.063	2.978	15.93	4.2	1.384	4.211	11.588	2.97849	2.97849	0.21	0.14314	0.162052	NA	0.08	NA	15.4022934
168	5	68695940	68695940	T	G	exonic	RAD17	NA	nonsynonymous SNV	RAD17:NM_133339:exon14:c.T1670G:p.L557R,RAD17:NM_133340:exon14:c.T1142G:p.L381R,RAD17:NM_133341:exon14:c.T1379G:p.L460R,RAD17:NM_002873:exon15:c.T1637G:p.L546R,RAD17:NM_133344:exon15:c.T1637G:p.L546R,RAD17:NM_133342:exon16:c.T1637G:p.L546R,RAD17:NM_133343:exon16:c.T1637G:p.L546R,RAD17:NM_133338:exon17:c.T1637G:p.L546R	exonic	ENSG00000152942	NA	nonsynonymous SNV	ENSG00000152942:ENST00000513214:exon5:c.T494G:p.L165R,ENSG00000152942:ENST00000282891:exon14:c.T1379G:p.L460R,ENSG00000152942:ENST00000358030:exon14:c.T1142G:p.L381R,ENSG00000152942:ENST00000380774:exon14:c.T1670G:p.L557R,ENSG00000152942:ENST00000305138:exon15:c.T1637G:p.L546R,ENSG00000152942:ENST00000345306:exon15:c.T1637G:p.L546R,ENSG00000152942:ENST00000521422:exon15:c.T1142G:p.L381R,ENSG00000152942:ENST00000354312:exon16:c.T1637G:p.L546R,ENSG00000152942:ENST00000361732:exon16:c.T1637G:p.L546R,ENSG00000152942:ENST00000509734:exon16:c.T1670G:p.L557R,ENSG00000152942:ENST00000354868:exon17:c.T1637G:p.L546R	Score=603;Name=lod=375	NA	5q13.2	NA	NA	NA	NA	rs1045051	0.26	0.26	0.207	0.254792	0.3231	0.3155	0.3012	0.0446	0.3732	0.31	0.34	0.27	0.06	0.2992	0.34	0	D	1.0	D	1.0	D	0.000	D	0.000	P	2.05	M	1.79	T	-1.039	T	0.000	T	0.695	4.291	22.4	5.73	2.203	7.248	15.060	4.29121	4.29121	0	0.321744	0.083976	NA	0.225	NA	15.3892894
169	8	24339679	24339679	G	A	exonic	ADAM7	NA	nonsynonymous SNV	ADAM7:NM_003817:exon9:c.G730A:p.V244M	exonic	ENSG00000069206	NA	nonsynonymous SNV	ENSG00000069206:ENST00000520720:exon3:c.G46A:p.V16M,ENSG00000069206:ENST00000175238:exon9:c.G730A:p.V244M,ENSG00000069206:ENST00000380789:exon9:c.G730A:p.V244M	Score=444;Name=lod=85	NA	8p21.2	NA	NA	NA	NA	rs13255694	0.25	0.25	0.216	0.261382	0.3032	0.1875	0.428	0.1006	0.3937	0.31	0.19	0.41	0.1	0.3261	0.41	0	D	1.0	D	1.0	D	0.000	D	0.000	P	3.595	H	-0.7	T	-1.131	T	0.000	T	0.427	3.357	17.31	5.63	2.652	4.064	15.176	3.357026	3.357026	0	0.329572	0.127099	NA	0.181	NA	15.3744614
169	8	110413762	110413762	T	C	exonic	PKHD1L1	NA	nonsynonymous SNV	PKHD1L1:NM_177531:exon14:c.T1318C:p.Y440H	exonic	ENSG00000205038	NA	nonsynonymous SNV	ENSG00000205038:ENST00000378402:exon14:c.T1318C:p.Y440H	Score=576;Name=lod=291	NA	8q23.1	Score=768;Name=V$MEF2_01	NA	NA	NA	rs964307	0.32	0.32	0.264	0.3123	0.3111	0.3929	0.4741	0.1483	0.3374	0.31	0.41	0.42	0.16	0.3309	0.42	0	D	0.998	D	0.972	D	0.002	N	0.997	P	1.955	M	2.03	T	-0.921	T	0.000	T	0.239	3.698	18.78	5.75	2.193	5.614	14.007	3.697657	3.697657	0	0.319029	0.188974	NA	0.29	NA	15.3723044
170	3	81698130	81698130	T	C	exonic	GBE1	NA	nonsynonymous SNV	GBE1:NM_000158:exon5:c.A568G:p.R190G	exonic	ENSG00000114480	NA	nonsynonymous SNV	ENSG00000114480:ENST00000429644:exon5:c.A568G:p.R190G,ENSG00000114480:ENST00000489715:exon5:c.A445G:p.R149G	Score=710;Name=lod=1022	NA	3p12.2	Score=856;Name=V$HAND1E47_01	NA	NA	NA	rs2229519	0.33	0.33	0.297	0.321486	0.3052	0.4425	0.3026	0.2579	0.3129	0.3	0.44	0.28	0.27	0.3746	0.44	0.02	D	0.028	B	0.009	B	0.004	N	0.423	P	2.91	M	-2.15	D	-0.925	T	0.000	T	0.244	2.273	13.56	4.81	2.255	3.477	3.475	2.272762	2.272762	0.03	0.300542	0.276631	NA	0.326	CLINSIG=other;CLNDBN=Malignant_melanoma;CLNREVSTAT=not;CLNACC=RCV000066196.2;CLNDSDB=MedGen:SNOMED_CT;CLNDSDBID=C0025202:2092003	15.3529914
171	16	28603655	28603655	T	G	exonic	SULT1A2	NA	nonsynonymous SNV	SULT1A2:NM_001054:exon7:c.A704C:p.N235T,SULT1A2:NM_177528:exon7:c.A704C:p.N235T	exonic	ENSG00000197165	NA	nonsynonymous SNV	ENSG00000197165:ENST00000533150:exon3:c.A605C:p.N202T,ENSG00000197165:ENST00000335715:exon7:c.A704C:p.N235T,ENSG00000197165:ENST00000395630:exon7:c.A704C:p.N235T	Score=454;Name=lod=93	NA	16p11.2	NA	NA	NA	NA	rs1059491	0.24	0.24	0.204	0.22484	0.3171	0.0744	0.3977	0.2209	0.1677	0.33	0.09	0.32	0.22	0.3126	0.36	0.01	D	1.0	D	1.0	D	0.000	D	0.022	P	2.82	M	4.45	T	-0.944	T	0.000	T	0.258	3.95	20.2	4.98	1.864	7.957	12.659	3.950088	3.950088	0.01	0.360814	0.246472	ID=COSM1579553;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.174	NA	15.3428194
172	1	27686399	27686399	G	T	exonic	MAP3K6	NA	nonsynonymous SNV	MAP3K6:NM_004672:exon17:c.C2269A:p.Q757K	exonic	ENSG00000142733	NA	nonsynonymous SNV	ENSG00000142733:ENST00000374040:exon16:c.C2245A:p.Q749K,ENSG00000142733:ENST00000357582:exon17:c.C2269A:p.Q757K,ENSG00000142733:ENST00000493901:exon18:c.C2269A:p.Q757K	Score=620;Name=lod=442	NA	1p36.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.03	D	0.906	P	0.542	P	.	.	0.991	D	0.565	N	-0.08	T	-0.769	T	0.177	T	0.714	3.813	19.36	5.03	2.610	5.201	12.037	3.812996	3.812996	NA	NA	NA	NA	NA	NA	15.3333334
172	1	144930940	144930940	T	C	exonic	PDE4DIP	NA	nonsynonymous SNV	PDE4DIP:NM_001002811:exon1:c.A769G:p.K257E	exonic	ENSG00000178104	NA	nonsynonymous SNV	ENSG00000178104:ENST00000313431:exon1:c.A769G:p.K257E,ENSG00000178104:ENST00000529945:exon1:c.A769G:p.K257E	Score=265;Name=lod=16	NA	1q21.1	Score=844;Name=V$FAC1_01	Name=KAP1	Name=134	NA	rs2147326	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	1	T	0.763	P	0.311	B	.	.	1.000	D	1.7	L	2.72	T	-1.113	T	0.015	T	0.327	0.892	8.625	5.53	2.100	3.061	13.604	0.89225	NA	1	NA	NA	NA	0.5	NA	15.3333334
172	6	38810663	38810663	A	C	exonic	DNAH8	NA	nonsynonymous SNV	DNAH8:NM_001206927:exon35:c.A4829C:p.H1610P	exonic	ENSG00000124721	NA	nonsynonymous SNV	ENSG00000124721:ENST00000441566:exon31:c.A4178C:p.H1393P,ENSG00000124721:ENST00000359357:exon33:c.A4178C:p.H1393P,ENSG00000124721:ENST00000327475:exon34:c.A4793C:p.H1598P,ENSG00000124721:ENST00000449981:exon35:c.A4829C:p.H1610P	Score=593;Name=lod=343	NA	6p21.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.04	D	0.1	B	0.279	B	0.001	D	0.995	N	3.18	M	0.05	T	-0.656	T	0.242	T	0.434	1.998	12.64	5.12	2.047	6.176	9.721	1.998387	1.998387	0.02	NA	NA	NA	NA	NA	15.3333334
172	17	38560731	38560731	C	T	exonic	TOP2A	NA	nonsynonymous SNV	TOP2A:NM_001067:exon18:c.G2059A:p.G687R	exonic	ENSG00000131747	NA	nonsynonymous SNV	ENSG00000131747:ENST00000423485:exon18:c.G2059A:p.G687R	Score=459;Name=lod=98	NA	17q21.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00004198	NA	0.01	D	0.273	B	0.23	B	0.000	D	1.000	D	1.745	L	1.93	T	-1.046	T	0.090	T	0.948	4.064	20.9	5.5	2.592	7.760	19.383	4.064383	4.064383	0.03	NA	NA	NA	NA	NA	15.3332914
172	2	160706630	160706630	G	A	exonic	LY75,LY75-CD302	NA	nonsynonymous SNV	LY75-CD302:NM_001198759:exon23:c.C3011T:p.P1004L,LY75-CD302:NM_001198760:exon23:c.C3011T:p.P1004L,LY75:NM_002349:exon23:c.C3011T:p.P1004L	exonic	ENSG00000054219,ENSG00000248672	NA	nonsynonymous SNV	ENSG00000054219:ENST00000263636:exon23:c.C3011T:p.P1004L,ENSG00000248672:ENST00000504764:exon23:c.C3011T:p.P1004L,ENSG00000248672:ENST00000505052:exon23:c.C3011T:p.P1004L,ENSG00000054219:ENST00000553424:exon23:c.C3011T:p.P1004L,ENSG00000054219:ENST00000554112:exon23:c.C3011T:p.P1004L	Score=431;Name=lod=75	NA	2q24.2	Score=949;Name=V$CETS1P54_01	NA	NA	NA	rs145262865	0.0005	0.0005	NA	0.000199681	NA	0.001	NA	NA	NA	NA	0.0017	NA	NA	0.00002491	0.0017	0.1	T	1.0	D	0.999	D	0.005	U	1.000	D	1.825	L	2.21	T	-1.107	T	0.107	T	0.694	3.637	18.5	5.54	2.609	4.305	16.373	3.636931	3.636931	0.01	0.000116	0.000227	ID=COSM1008195;OCCURENCE=1(endometrium)	NA	NA	15.3331925
172	18	77659045	77659045	G	C	exonic	KCNG2	NA	nonsynonymous SNV	KCNG2:NM_012283:exon2:c.G630C:p.E210D	exonic	ENSG00000178342	NA	nonsynonymous SNV	ENSG00000178342:ENST00000316249:exon2:c.G630C:p.E210D	Score=679;Name=lod=765	NA	18q23	NA	NA	NA	NA	rs200870939	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0002	0.0001	0.34	T	0.793	P	0.459	P	0.120	U	1.000	D	2.045	M	-4.42	D	0.434	D	0.834	D	0.169	1.849	12.14	1.31	0.638	1.858	4.322	1.849026	1.849026	0.09	0.000116	0	NA	NA	NA	15.3330174
172	3	49147760	49147760	C	T	exonic	USP19	NA	nonsynonymous SNV	USP19:NM_006677:exon25:c.G3586A:p.V1196I,USP19:NM_001199160:exon26:c.G3889A:p.V1297I,USP19:NM_001199161:exon26:c.G3895A:p.V1299I,USP19:NM_001199162:exon26:c.G3859A:p.V1287I	exonic	ENSG00000172046	NA	nonsynonymous SNV	ENSG00000172046:ENST00000398896:exon23:c.G3010A:p.V1004I,ENSG00000172046:ENST00000398888:exon25:c.G3586A:p.V1196I,ENSG00000172046:ENST00000398898:exon25:c.G3706A:p.V1236I,ENSG00000172046:ENST00000398892:exon26:c.G3706A:p.V1236I,ENSG00000172046:ENST00000417901:exon26:c.G3895A:p.V1299I,ENSG00000172046:ENST00000434032:exon26:c.G3889A:p.V1297I,ENSG00000172046:ENST00000453664:exon26:c.G3859A:p.V1287I	Score=602;Name=lod=374	NA	3p21.31	NA	NA	NA	NA	rs185755099	0.0009	0.0009	NA	0	NA	NA	NA	NA	NA	NA	NA	0.01	NA	0.0003	0.01	0.17	T	0.999	D	0.997	D	0.000	D	1.000	D	1.24	L	1.4	T	-0.967	T	0.136	T	0.483	4.869	27.9	5.67	2.666	7.476	19.763	4.86895	4.86895	0.03	0.000236	0	NA	NA	NA	15.3327974
172	3	38049774	38049774	C	A	exonic	PLCD1	NA	nonsynonymous SNV	PLCD1:NM_001130964:exon13:c.G2050T:p.V684L,PLCD1:NM_006225:exon13:c.G1987T:p.V663L	exonic	ENSG00000187091	NA	nonsynonymous SNV	ENSG00000187091:ENST00000334661:exon13:c.G1987T:p.V663L,ENSG00000187091:ENST00000463876:exon13:c.G2050T:p.V684L	Score=340;Name=lod=32	NA	3p22.2	NA	NA	NA	NA	rs78426951	0.0009	0.0009	NA	0.000399361	0.001	NA	0.0014	NA	NA	0.0013	NA	0.0028	NA	0.0009	0.0028	0.51	T	0.998	D	0.955	D	0.000	D	1.000	D	1.335	L	-0.36	T	-0.642	T	0.328	T	0.666	3.975	20.3	4.05	2.477	1.717	12.705	3.974526	3.974526	0.01	0.001395	0.000454	NA	NA	NA	15.3300384
172	12	4870233	4870233	A	G	exonic	GALNT8	NA	nonsynonymous SNV	GALNT8:NM_017417:exon7:c.A1283G:p.N428S	exonic	ENSG00000130035	NA	nonsynonymous SNV	ENSG00000130035:ENST00000252318:exon7:c.A1283G:p.N428S	Score=505;Name=lod=150	NA	12p13.32	NA	NA	NA	NA	rs143807268	0.0009	0.0009	0	0.000798722	0.002	0.001	NA	NA	0.001	0.0013	0.0017	NA	NA	0.0009	0.0017	0	D	0.943	P	0.543	P	0.044	N	0.882	D	3.235	M	0.2	T	-0.194	T	0.296	T	0.274	3.82	19.4	3.27	1.389	8.531	9.672	3.819813	3.819813	0	0.001744	0.001135	NA	NA	NA	15.3286894
172	7	38574539	38574539	G	A	exonic	AMPH	NA	nonsynonymous SNV	AMPH:NM_001635:exon2:c.C142T:p.R48W,AMPH:NM_139316:exon2:c.C142T:p.R48W	exonic	ENSG00000078053	NA	nonsynonymous SNV	ENSG00000078053:ENST00000325590:exon2:c.C142T:p.R48W,ENSG00000078053:ENST00000356264:exon2:c.C142T:p.R48W,ENSG00000078053:ENST00000428293:exon2:c.C142T:p.R48W	Score=608;Name=lod=394	NA	7p14.1	NA	NA	NA	NA	rs147234401	0.0009	0.0009	NA	0.000399361	0.001	NA	NA	0.0008	NA	0.0013	NA	NA	0.002	0.0012	0.0028	0	D	1.0	D	0.997	D	0.000	D	1.000	D	2.135	M	-0.02	T	-0.224	T	0.386	T	0.774	3.654	18.58	-0.747	-0.037	1.238	15.376	3.653729	3.653729	0	0.002791	0.000227	ID=COSM1450618;OCCURENCE=1(large_intestine)	NA	NA	15.3283424
172	7	143701389	143701389	A	T	exonic	OR6B1	NA	nonsynonymous SNV	OR6B1:NM_001005281:exon1:c.A300T:p.Q100H	exonic	ENSG00000221813	NA	nonsynonymous SNV	ENSG00000221813:ENST00000408922:exon1:c.A300T:p.Q100H	Score=295;Name=lod=21	NA	7q35	NA	NA	NA	NA	rs182442940	0.0023	0.0023	NA	0.00259585	0.004	NA	0.0086	0.0015	0.001	0.0013	NA	0.01	NA	0.0018	0.01	0	D	1.0	D	1.0	D	0.003	U	0.599	D	3.865	H	4.44	T	-0.976	T	0.030	T	0.811	3.587	18.27	-3.13	-0.425	-1.271	13.911	3.587495	3.587495	0	0.002107	0.001631	NA	0.007	NA	15.3254264
173	2	228102723	228102723	G	C	exonic	COL4A3	NA	nonsynonymous SNV	COL4A3:NM_000091:exon2:c.G127C:p.G43R	exonic	ENSG00000169031	NA	nonsynonymous SNV	ENSG00000169031:ENST00000396578:exon2:c.G127C:p.G43R	NA	NA	2q36.3	NA	Name=FOXA1_(SC-101058)	NA	NA	rs13424243	0.25	0.25	0.237	0.230232	0.3539	0.0516	0.2637	0.32	0.1421	0.35	0.07	0.27	0.29	0.2884	0.37	0.01	D	1.0	D	0.997	D	0.008	N	1.000	P	3.85	H	-4.63	D	-1.817	T	0.000	T	0.163	3.005	16.02	4.31	1.315	1.245	9.784	3.004856	3.004856	0	0.371296	0.306486	NA	0.217	NA	15.3197374
174	6	144184227	144184227	A	C	exonic	LTV1	NA	nonsynonymous SNV	LTV1:NM_032860:exon10:c.A1121C:p.K374T	exonic	ENSG00000135521	NA	nonsynonymous SNV	ENSG00000135521:ENST00000367576:exon10:c.A1121C:p.K374T	Score=432;Name=lod=76	NA	6q24.2	NA	NA	NA	NA	rs41285031	0.0023	0.0023	NA	0.00179712	0.0089	NA	NA	NA	NA	0.01	NA	NA	NA	0.0042	0.01	0.18	T	0.899	P	0.826	P	0.000	D	1.000	D	2.85	M	.	.	-0.452	T	0.310	T	0.514	3.653	18.57	4.45	0.965	5.846	11.336	3.653331	3.653331	0.01	0.005698	0.000454	NA	NA	NA	15.3145354
174	16	23702246	23702246	G	C	exonic	ERN2	NA	nonsynonymous SNV	ERN2:NM_033266:exon22:c.C2831G:p.A944G	exonic	ENSG00000134398	NA	nonsynonymous SNV	ENSG00000134398:ENST00000457008:exon21:c.C2531G:p.A844G,ENSG00000134398:ENST00000256797:exon22:c.C2831G:p.A944G	Score=401;Name=lod=57	NA	16p12.2	NA	NA	NA	NA	rs56129167	0.0023	0.0023	NA	0.00379393	0.007	NA	0.0072	NA	0.0072	0.004	NA	0.01	NA	0.0061	0.01	0	D	0.955	P	0.871	P	0.000	D	1.000	D	3.165	M	1.46	T	-0.652	T	0.163	T	0.268	2.281	13.58	3.25	0.306	6.648	12.983	2.281059	2.281059	0.01	0.008605	0.001138	NA	NA	NA	15.3116284
174	1	29527028	29527028	G	A	exonic	MECR	NA	nonsynonymous SNV	MECR:NM_001024732:exon7:c.C602T:p.A201V,MECR:NM_016011:exon7:c.C830T:p.A277V	exonic	ENSG00000116353	NA	nonsynonymous SNV	ENSG00000116353:ENST00000463412:exon5:c.C449T:p.A150V,ENSG00000116353:ENST00000263702:exon7:c.C830T:p.A277V,ENSG00000116353:ENST00000373791:exon7:c.C602T:p.A201V	Score=531;Name=lod=191	NA	1p35.3	Score=808;Name=V$TCF11MAFG_01	NA	NA	NA	rs148978800	0.0018	0.0018	0.002	0.00179712	0.008	NA	NA	0.0008	NA	0.01	NA	NA	NA	0.005	0.01	0.08	T	0.965	D	0.335	B	0.022	N	0.951	D	2.22	M	3.44	T	-1.063	T	0.016	T	0.271	3.225	16.81	4.75	2.696	4.282	10.263	3.224512	3.224512	0.19	0.008721	0.000681	ID=COSM908048;OCCURENCE=1(endometrium)	NA	NA	15.3116124
174	17	38935876	38935876	C	T	exonic	KRT27	NA	nonsynonymous SNV	KRT27:NM_181537:exon5:c.G850A:p.A284T	exonic	ENSG00000171446	NA	nonsynonymous SNV	ENSG00000171446:ENST00000301656:exon5:c.G850A:p.A284T	Score=371;Name=lod=43	NA	17q21.2	NA	Name=TBP,E2F6_(H-50)	Name=12	NA	rs17558532	0.14	0.14	0.11	0.161342	0.1849	0.0625	0.1571	0.1611	0.2423	0.19	0.05	0.17	0.13	0.1698	0.19	0.08	T	0.525	P	0.177	B	0.000	D	0.000	P	0.935	L	-2.48	D	-0.971	T	0.002	T	0.146	4.403	23.3	5.52	2.754	2.482	18.777	4.403329	4.403329	0.19	0.170814	0.173173	NA	0.159	NA	15.3078194
174	13	33629393	33629393	C	T	exonic	KL	NA	nonsynonymous SNV	KL:NM_004795:exon3:c.C1540T:p.P514S	exonic	ENSG00000133116	NA	nonsynonymous SNV	ENSG00000133116:ENST00000380099:exon3:c.C1540T:p.P514S,ENSG00000133116:ENST00000426690:exon3:c.C619T:p.P207S	Score=412;Name=lod=63	NA	13q13.1	NA	NA	NA	NA	rs3752472	0.04	0.04	0.032	0.0389377	NA	0.0863	0.0692	0.028	0.0235	0.0013	0.07	0.06	0.03	0.0259	0.07	0.85	T	1.0	D	0.996	D	0.000	D	1.000	D	1.155	L	1.62	T	-1.140	T	0.014	T	0.669	3.707	18.83	6.03	2.861	7.418	20.557	3.707344	3.707344	0.01	0.001163	0.009986	NA	0.022	NA	15.3062704
174	9	15874585	15874585	T	G	exonic	CCDC171	NA	nonsynonymous SNV	CCDC171:NM_173550:exon24:c.T3524G:p.L1175R	exonic	ENSG00000164989	NA	nonsynonymous SNV	ENSG00000164989:ENST00000297641:exon24:c.T3524G:p.L1175R,ENSG00000164989:ENST00000380701:exon24:c.T3524G:p.L1175R	Score=812;Name=lod=2661	NA	9p22.3	NA	NA	NA	NA	rs149814894	0.01	0.01	0.004	0.00678914	0.0109	NA	0.0058	NA	0.0194	0.01	NA	0.01	NA	0.0095	0.01	0.12	T	1.0	D	0.999	D	0.000	D	1.000	D	0.805	L	2.14	T	-0.907	T	0.142	T	0.897	3.602	18.34	5.74	2.205	5.172	16.105	3.602189	3.602189	0	0.007093	0.001135	ID=COSM1235977,COSM1235976;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	NA	NA	15.3058404
175	7	129663496	129663496	C	T	exonic	ZC3HC1	NA	nonsynonymous SNV	ZC3HC1:NM_016478:exon8:c.G1088A:p.R363H	exonic	ENSG00000091732	NA	nonsynonymous SNV	ENSG00000091732:ENST00000358303:exon8:c.G1088A:p.R363H,ENSG00000091732:ENST00000481503:exon8:c.G959A:p.R320H,ENSG00000091732:ENST00000311873:exon9:c.G1025A:p.R342H	Score=457;Name=lod=96	Name=Coronary heart disease	7q32.2	Score=809;Name=V$ER_Q6	NA	NA	NA	rs11556924	0.19	0.19	0.193	0.155751	0.3767	0.0496	0.2089	0.0265	0.1748	0.38	0.05	0.22	0.05	0.2729	0.38	0.48	T	1.0	D	0.959	D	0.000	D	0.000	P	1.79	L	1.28	T	-0.984	T	0.000	T	0.287	4.497	24.1	5.49	2.590	2.567	16.096	4.49715	4.49715	0	0.382558	0.08148	NA	0.145	NA	15.3011754
175	6	97058553	97058553	A	G	exonic	FHL5	NA	nonsynonymous SNV	FHL5:NM_001170807:exon5:c.A610G:p.R204G,FHL5:NM_020482:exon6:c.A610G:p.R204G	exonic	ENSG00000112214	NA	nonsynonymous SNV	ENSG00000112214:ENST00000450218:exon5:c.A610G:p.R204G,ENSG00000112214:ENST00000541107:exon5:c.A610G:p.R204G,ENSG00000112214:ENST00000326771:exon6:c.A610G:p.R204G	Score=439;Name=lod=81	NA	6q16.1	NA	NA	NA	NA	rs2273621	0.39	0.39	0.423	0.398163	0.3519	0.3522	0.3026	0.5499	0.3558	0.34	0.35	0.35	0.56	0.3485	0.56	0.02	D	0.051	B	0.12	B	0.007	N	0.127	P	2.955	M	-2.32	D	0.066	D	0.573	D	0.27	2.958	15.86	4.7	1.019	4.670	13.127	2.95837	2.95837	0	0.334419	0.506128	NA	0.449	NA	15.2985144
175	2	38298139	38298139	T	C	exonic	CYP1B1	NA	nonsynonymous SNV	CYP1B1:NM_000104:exon3:c.A1358G:p.N453S	exonic	ENSG00000138061	NA	nonsynonymous SNV	ENSG00000138061:ENST00000260630:exon3:c.A1358G:p.N453S,ENSG00000138061:ENST00000407341:exon3:c.A1358G:p.N453S	Score=502;Name=lod=146	NA	2p22.2	Score=953;Name=V$FOXO1_01	NA	Name=9	NA	rs1800440	0.1	0.1	0.078	0.0996406	0.1958	0.005	0.1311	0.0068	0.2014	0.2	0.01	0.16	0.01	0.1547	0.2	0.04	D	0.596	P	0.306	B	0.000	D	0.000	P	1.725	L	-0.22	T	-1.072	T	0.000	T	0.039	3.651	18.56	5.95	2.279	6.035	14.376	3.651256	3.651256	0.01	0.186977	0.033364	ID=COSM1408011;OCCURENCE=2(large_intestine)	0.109	NA	15.2958564
176	17	73263012	73263012	C	T	exonic	MIF4GD	NA	nonsynonymous SNV	MIF4GD:NM_001242501:exon5:c.G478A:p.E160K,MIF4GD:NM_001242500:exon6:c.G580A:p.E194K,MIF4GD:NM_001242498:exon7:c.G601A:p.E201K,MIF4GD:NM_020679:exon7:c.G580A:p.E194K	exonic	ENSG00000125457	NA	nonsynonymous SNV	ENSG00000125457:ENST00000579119:exon5:c.G565A:p.E189K,ENSG00000125457:ENST00000580571:exon5:c.G322A:p.E108K,ENSG00000125457:ENST00000325102:exon6:c.G478A:p.E160K,ENSG00000125457:ENST00000580717:exon6:c.G478A:p.E160K,ENSG00000125457:ENST00000245551:exon7:c.G580A:p.E194K,ENSG00000125457:ENST00000577542:exon7:c.G601A:p.E201K,ENSG00000125457:ENST00000579297:exon7:c.G601A:p.E201K	Score=611;Name=lod=405	NA	17q25.1	Score=925;Name=V$LMO2COM_01	Name=Pol2-4H8,Pol2	Name=8	NA	rs61739324	0.08	0.08	0.081	0.103435	0.001	0.0992	0.072	0.2133	0.0869	0.0026	0.06	0.07	0.25	0.0364	0.25	0.59	T	0.896	P	0.519	P	.	.	0.000	P	1.78	L	2.28	T	-0.942	T	0.000	T	0.261	3.256	16.92	4.76	1.428	7.450	14.690	3.255635	3.255635	0.04	0.002791	0.154789	NA	0.109	NA	15.2931424
176	4	187518041	187518041	T	C	exonic	FAT1	NA	nonsynonymous SNV	FAT1:NM_005245:exon25:c.A12653G:p.D4218G	exonic	ENSG00000083857	NA	nonsynonymous SNV	ENSG00000083857:ENST00000441802:exon25:c.A12653G:p.D4218G	Score=395;Name=lod=54	NA	4q35.2	NA	NA	NA	NA	rs72716244	0.01	0.01	0.011	0.00599042	0.0169	NA	0.0144	0.0008	0.002	0.01	NA	0.02	NA	0.0107	0.02	0.26	T	1.0	D	0.998	D	0.000	D	1.000	D	1.21	L	-0.55	T	-0.476	T	0.265	T	0.288	2.44	14.12	5.23	2.206	4.029	15.287	2.439535	2.439535	0.09	0.014268	0.001597	NA	0.087	NA	15.2914654
176	16	3458609	3458609	G	A	exonic	ZNF174	NA	nonsynonymous SNV	ZNF174:NM_003450:exon3:c.G914A:p.R305Q	exonic	ENSG00000103343	NA	nonsynonymous SNV	ENSG00000103343:ENST00000268655:exon3:c.G914A:p.R305Q,ENSG00000103343:ENST00000571936:exon4:c.G914A:p.R305Q	NA	NA	16p13.3	NA	Name=MafK_(SC-477),MafK_(ab50322),SETDB1,KAP1	NA	NA	rs11640177	0.01	0.01	0.01	0.00399361	0.0149	NA	0.0043	NA	0.002	0.02	NA	0.0028	NA	0.0116	0.02	0	D	1.0	D	0.982	D	0.021	N	1.000	D	0.695	N	5.47	T	-0.543	T	0.004	T	0.375	2.086	12.93	4.11	2.604	2.178	12.151	2.086368	2.086368	0.33	0.017791	0.004779	NA	NA	NA	15.2890424
176	11	86663296	86663296	G	A	exonic	FZD4	NA	nonsynonymous SNV	FZD4:NM_012193:exon2:c.C502T:p.P168S	exonic	ENSG00000174804	NA	nonsynonymous SNV	ENSG00000174804:ENST00000531380:exon2:c.C502T:p.P168S	Score=581;Name=lod=306	NA	11q14.2	Score=900;Name=V$CEBPB_01	NA	Name=50	NA	rs61735303	0.01	0.01	0.007	0.0147764	0.0109	NA	0.0245	0.0076	0.0368	0.01	NA	0.02	0.01	0.0166	0.022	.	.	0.146	B	0.024	B	0.000	D	1.000	D	0	N	-1.46	T	-0.771	T	0.156	T	0.309	2.898	15.66	5.82	2.760	6.399	20.100	2.897848	2.897848	0.02	0.018027	0.008632	NA	0.014	NA	15.2878064
176	3	136664737	136664737	C	T	exonic	NCK1	NA	nonsynonymous SNV	NCK1:NM_001190796:exon2:c.C347T:p.A116V,NCK1:NM_006153:exon3:c.C539T:p.A180V	exonic	ENSG00000158092	NA	nonsynonymous SNV	ENSG00000158092:ENST00000469404:exon2:c.C347T:p.A116V,ENSG00000158092:ENST00000288986:exon3:c.C539T:p.A180V,ENSG00000158092:ENST00000481752:exon3:c.C539T:p.A180V	Score=726;Name=lod=1195	NA	3q22.3	Score=686;Name=V$PPARG_02	NA	NA	NA	rs13320485	0.01	0.01	0.006	0.00858626	0.0179	NA	0.0274	0.0023	0.0031	0.01	NA	0.03	0.01	0.0117	0.03	0.06	T	0.415	B	0.119	B	0.000	D	1.000	D	1.995	M	-0.32	T	-0.751	T	0.120	T	0.245	4.836	27.5	6.16	2.937	4.451	18.354	4.836165	4.836165	0.05	0.016628	0.002724	NA	0.014	NA	15.2871054
177	11	47599322	47599322	T	C	exonic	KBTBD4	NA	nonsynonymous SNV	KBTBD4:NM_016506:exon2:c.A230G:p.N77S,KBTBD4:NM_018095:exon2:c.A278G:p.N93S	exonic	ENSG00000123444,ENSG00000231880	NA	nonsynonymous SNV	ENSG00000231880:ENST00000450908:exon1:c.T44C:p.V15A,ENSG00000123444:ENST00000533290:exon1:c.A305G:p.N102S,ENSG00000123444:ENST00000395288:exon2:c.A230G:p.N77S,ENSG00000123444:ENST00000430070:exon2:c.A278G:p.N93S,ENSG00000123444:ENST00000525720:exon2:c.A377G:p.N126S,ENSG00000123444:ENST00000526005:exon2:c.A230G:p.N77S,ENSG00000123444:ENST00000529499:exon2:c.A230G:p.N77S,ENSG00000123444:ENST00000529946:exon2:c.A230G:p.N77S,ENSG00000123444:ENST00000531067:exon2:c.A230G:p.N77S,ENSG00000123444:ENST00000534239:exon2:c.A305G:p.N102S	Score=715;Name=lod=1078	NA	11p11.2	NA	Name=ZNF274,eGFP-GATA2	Name=27	NA	rs75352463	0.01	0.01	0.006	0.00519169	0.0219	NA	0.0029	NA	0.002	0.02	NA	0.0028	NA	0.012	0.02	0.06	T	0.271	B	0.148	B	0.000	D	1.000	D	1.1	L	-0.5	T	-0.733	T	0.133	T	0.355	3.06	16.21	5.43	2.047	7.647	15.468	3.059969	3.059969	0.01	0.01617	0.004089	NA	0.007	NA	15.2832634
178	5	112178795	112178795	G	A	exonic	APC	NA	nonsynonymous SNV	APC:NM_001127511:exon14:c.G7450A:p.G2484S,APC:NM_000038:exon16:c.G7504A:p.G2502S,APC:NM_001127510:exon17:c.G7504A:p.G2502S	exonic	ENSG00000134982	NA	nonsynonymous SNV	ENSG00000134982:ENST00000257430:exon16:c.G7504A:p.G2502S,ENSG00000134982:ENST00000457016:exon16:c.G7504A:p.G2502S,ENSG00000134982:ENST00000508376:exon17:c.G7504A:p.G2502S	Score=366;Name=lod=41	NA	5q22.2	NA	NA	NA	NA	rs2229995	0.01	0.01	0.006	0.00838658	0.0209	NA	0.0043	0.0008	0.0174	0.02	NA	0.01	NA	0.0199	0.02	.	.	0.234	B	0.156	B	0.000	D	0.995	D	0	N	-1.71	D	-0.723	T	0.172	T	0.191	2.886	15.62	5.95	2.825	2.616	11.309	2.8862	2.8862	0.23	0.02	0.00386	NA	NA	CLINSIG=non-pathogenic|non-pathogenic|non-pathogenic;CLNDBN=not_provided|not_specified|Adenomatous_polyposis_coli;CLNREVSTAT=mult|single|single;CLNACC=RCV000034399.2|RCV000077994.2|RCV000119135.1;CLNDSDB=.|.|GeneReviews:MedGen:OMIM:Orphanet:SNOMED_CT;CLNDSDBID=.|.|NBK1345:CN074282:175100:ORPHA733:70921007	15.2725334
178	1	67450431	67450431	A	G	exonic	MIER1	NA	nonsynonymous SNV	MIER1:NM_001077701:exon13:c.A1387G:p.R463G,MIER1:NM_001077700:exon14:c.A1546G:p.R516G,MIER1:NM_001146110:exon15:c.A1438G:p.R480G,MIER1:NM_001146112:exon15:c.A1306G:p.R436G,MIER1:NM_020948:exon15:c.A1438G:p.R480G	exonic	ENSG00000198160	NA	nonsynonymous SNV	ENSG00000198160:ENST00000355356:exon13:c.A1387G:p.R463G,ENSG00000198160:ENST00000401041:exon14:c.A1546G:p.R516G,ENSG00000198160:ENST00000357692:exon15:c.A1438G:p.R480G	Score=498;Name=lod=141	NA	1p31.3	NA	Name=BATF,NFKB,BCL11A	Name=12	NA	rs17129563	0.01	0.01	0.01	0.00658946	0.0209	NA	0.013	NA	0.0031	0.02	NA	0.01	NA	0.0149	0.026	0.2	T	0.156	B	0.016	B	0.000	D	1.000	D	0.55	N	0.53	T	-1.073	T	0.055	T	0.254	2.628	14.75	5.55	2.236	4.302	14.582	2.628286	2.628286	0.01	0.026033	0.004355	NA	NA	NA	15.2715004
178	17	58824617	58824617	G	A	exonic	BCAS3	NA	nonsynonymous SNV	BCAS3:NM_001099432:exon6:c.G380A:p.R127K,BCAS3:NM_017679:exon6:c.G380A:p.R127K	exonic	ENSG00000141376	NA	nonsynonymous SNV	ENSG00000141376:ENST00000408905:exon5:c.G380A:p.R127K,ENSG00000141376:ENST00000588462:exon5:c.G380A:p.R127K,ENSG00000141376:ENST00000390652:exon6:c.G380A:p.R127K,ENSG00000141376:ENST00000407086:exon6:c.G380A:p.R127K,ENSG00000141376:ENST00000588168:exon6:c.G380A:p.R127K,ENSG00000141376:ENST00000589222:exon6:c.G380A:p.R127K	Score=584;Name=lod=315	NA	17q23.2	NA	NA	NA	NA	rs34431714	0.01	0.01	0.017	0.0091853	0.0229	0.002	0.0173	0.0008	0.0082	0.03	0.0017	0.01	NA	0.0191	0.03	0.15	T	0.974	D	0.969	D	0.000	D	1.000	D	1.205	L	3.24	T	-1.194	T	0.018	T	0.262	3.357	17.31	5.47	2.585	6.859	14.883	3.356755	3.356755	0.15	0.02483	0.007547	NA	NA	NA	15.2665034
179	12	25311489	25311489	G	T	exonic	CASC1	NA	nonsynonymous SNV	CASC1:NM_001082973:exon3:c.C97A:p.R33S,CASC1:NM_001082972:exon4:c.C289A:p.R97S,CASC1:NM_018272:exon4:c.C115A:p.R39S	exonic	ENSG00000118307	NA	nonsynonymous SNV	ENSG00000118307:ENST00000320267:exon3:c.C97A:p.R33S,ENSG00000118307:ENST00000354189:exon4:c.C289A:p.R97S,ENSG00000118307:ENST00000395987:exon4:c.C115A:p.R39S	Score=401;Name=lod=57	NA	12p12.1	NA	NA	NA	NA	rs10842496	0.27	0.27	0.261	0.253794	0.3757	0.1925	0.3487	0.1293	0.2924	0.37	0.24	0.31	0.14	0.3321	0.37	0.02	D	1.0	D	0.999	D	0.000	D	0.000	P	2.125	M	1.99	T	-1.027	T	0.000	T	0.302	3.402	17.49	5.42	2.535	3.836	14.726	3.401556	3.401556	0	0.36168	0.154562	NA	0.254	NA	15.2638534
179	19	2039727	2039727	C	T	exonic	MKNK2	NA	nonsynonymous SNV	MKNK2:NM_199054:exon14:c.G1283A:p.R428Q	exonic	ENSG00000099875	NA	nonsynonymous SNV	ENSG00000099875:ENST00000589441:exon3:c.G341A:p.R114Q,ENSG00000099875:ENST00000541165:exon12:c.G890A:p.R297Q,ENSG00000099875:ENST00000591601:exon13:c.G1283A:p.R428Q,ENSG00000099875:ENST00000250896:exon14:c.G1283A:p.R428Q	Score=618;Name=lod=432	NA	19p13.3	Score=730;Name=V$LUN1_01	Name=Pol2-4H8	Name=5	NA	rs34475638	0.01	0.01	0.01	0.0107827	0.0338	NA	0.0159	NA	0.0092	0.03	NA	0.02	NA	0.0192	0.03	0.44	T	0.342	B	0.027	B	0.015	N	1.000	D	0.895	L	-0.22	T	-1.060	T	0.046	T	0.093	2.64	14.79	2.49	1.980	2.700	3.816	2.639543	2.639543	0.5	0.024546	0.003858	NA	0.014	NA	15.2557874
180	17	56348106	56348106	T	C	exonic	MPO	NA	nonsynonymous SNV	MPO:NM_000250:exon12:c.A2149G:p.I717V	exonic	ENSG00000005381	NA	nonsynonymous SNV	ENSG00000005381:ENST00000577220:exon3:c.A244G:p.I82V,ENSG00000005381:ENST00000340482:exon11:c.A2245G:p.I749V,ENSG00000005381:ENST00000225275:exon12:c.A2149G:p.I717V	Score=462;Name=lod=101	NA	17q22	Score=761;Name=V$MEF2_01	Name=ZEB1_(SC-25388),CTCF_(SC-5916),ELF1_(SC-631),CTCF,GABP	Name=11	NA	rs2759	0.02	0.02	0.016	0.0133786	0.0298	NA	0.0245	0.0106	0.0061	0.02	NA	0.04	0.02	0.0247	0.043	1	T	0.118	B	0.117	B	0.000	D	0.995	D	-0.19	N	-0.15	T	-1.038	T	0.024	T	0.092	0.87	8.528	4.24	2.137	0.614	10.034	0.870326	NA	0.52	0.028605	0.010894	NA	0.029	NA	15.2502284
180	20	42355169	42355169	G	C	exonic	GTSF1L	NA	nonsynonymous SNV	GTSF1L:NM_001008901:exon1:c.C166G:p.L56V,GTSF1L:NM_176791:exon1:c.C166G:p.L56V	exonic	ENSG00000124196	NA	nonsynonymous SNV	ENSG00000124196:ENST00000373003:exon1:c.C166G:p.L56V,ENSG00000124196:ENST00000373005:exon1:c.C166G:p.L56V	Score=522;Name=lod=177	NA	20q13.12	NA	NA	NA	NA	rs17826038	0.02	0.02	0.013	0.014377	0.0328	NA	0.036	0.0015	0.0123	0.03	NA	0.04	0.002	0.0215	0.04	0.06	T	1.0	D	0.998	D	0.001	D	0.869	D	2.6	M	-0.18	T	-0.474	T	0.141	T	0.155	2.38	13.92	2.74	1.137	0.781	7.110	2.380239	2.380239	0.01	0.030349	0.006355	NA	0.014	NA	15.2486844
180	6	3012778	3012778	G	A	exonic	NQO2	NA	nonsynonymous SNV	NQO2:NM_000904:exon4:c.G173A:p.G58D	exonic	ENSG00000124588	NA	nonsynonymous SNV	ENSG00000124588:ENST00000380430:exon4:c.G173A:p.G58D,ENSG00000124588:ENST00000380454:exon4:c.G173A:p.G58D,ENSG00000124588:ENST00000380455:exon4:c.G173A:p.G58D,ENSG00000124588:ENST00000380441:exon5:c.G173A:p.G58D,ENSG00000124588:ENST00000380472:exon5:c.G173A:p.G58D,ENSG00000124588:ENST00000397717:exon5:c.G173A:p.G58D,ENSG00000124588:ENST00000426637:exon6:c.G173A:p.G58D,ENSG00000124588:ENST00000338130:exon7:c.G173A:p.G58D	Score=340;Name=lod=32	NA	6p25.2	NA	NA	NA	NA	rs17300141	0.02	0.02	0.015	0.0177716	0.0268	NA	0.0101	0.0015	0.0542	0.03	NA	0.01	0.0041	0.0294	0.03	.	.	1.0	D	0.98	D	0.000	D	0.997	D	3.055	M	2.94	T	-0.929	T	0.079	T	0.378	2.522	14.39	4.48	0.752	5.151	17.652	2.521675	2.521675	0	0.029767	0.004312	NA	NA	NA	15.2473664
181	6	4996543	4996543	C	T	exonic	RPP40	NA	nonsynonymous SNV	RPP40:NM_006638:exon6:c.G671A:p.S224N	exonic	ENSG00000124787	NA	nonsynonymous SNV	ENSG00000124787:ENST00000319533:exon5:c.G602A:p.S201N,ENSG00000124787:ENST00000380051:exon6:c.G671A:p.S224N,ENSG00000124787:ENST00000464646:exon6:c.G491A:p.S164N	Score=325;Name=lod=28	NA	6p25.1	Score=814;Name=V$PAX5_01	NA	NA	NA	rs62385118	0.04	0.04	0.033	0.0465256	0.0278	0.0387	0.036	0.0673	0.0532	0.03	0.04	0.04	0.04	0.0343	0.065	0.5	T	0.074	B	0.034	B	0.000	D	0.986	D	2.48	M	0.94	T	-1.022	T	0.070	T	0.267	1.412	10.66	4.45	1.223	2.169	14.398	1.412049	1.412049	0.01	0.03407	0.064458	NA	0.036	NA	15.2371634
182	3	184099050	184099050	C	T	exonic	CHRD	NA	nonsynonymous SNV	CHRD:NM_003741:exon3:c.C280T:p.P94S	exonic	ENSG00000090539	NA	nonsynonymous SNV	ENSG00000090539:ENST00000204604:exon3:c.C280T:p.P94S,ENSG00000090539:ENST00000348986:exon3:c.C280T:p.P94S,ENSG00000090539:ENST00000420973:exon3:c.C280T:p.P94S,ENSG00000090539:ENST00000450923:exon3:c.C280T:p.P94S	Score=537;Name=lod=203	NA	3q27.1	Score=683;Name=V$P53_01	Name=E2F6_(H-50)	Name=7	NA	rs34095724	0.04	0.04	0.051	0.0389377	0.0378	0.002	0.0173	0.093	0.0204	0.04	0.0017	0.02	0.11	0.0335	0.11	0.43	T	0.004	B	0.014	B	0.001	D	1.000	D	0.205	N	2.83	T	-0.888	T	0.000	T	0.079	-0.14	3.315	4.3	1.169	0.462	7.737	-0.140029	NA	0.72	0.033977	0.093097	NA	0.051	NA	15.2280564
183	1	29320013	29320013	G	A	exonic	EPB41	NA	nonsynonymous SNV	EPB41:NM_001166005:exon3:c.G640A:p.V214I,EPB41:NM_001166006:exon3:c.G640A:p.V214I,EPB41:NM_001166007:exon3:c.G13A:p.V5I,EPB41:NM_203343:exon3:c.G640A:p.V214I,EPB41:NM_004437:exon4:c.G13A:p.V5I,EPB41:NM_203342:exon4:c.G13A:p.V5I	exonic	ENSG00000159023	NA	nonsynonymous SNV	ENSG00000159023:ENST00000343067:exon3:c.G640A:p.V214I,ENSG00000159023:ENST00000347529:exon3:c.G640A:p.V214I,ENSG00000159023:ENST00000356093:exon3:c.G640A:p.V214I,ENSG00000159023:ENST00000373797:exon3:c.G640A:p.V214I,ENSG00000159023:ENST00000373798:exon3:c.G640A:p.V214I,ENSG00000159023:ENST00000398863:exon3:c.G640A:p.V214I,ENSG00000159023:ENST00000349460:exon4:c.G13A:p.V5I,ENSG00000159023:ENST00000373800:exon4:c.G13A:p.V5I	Score=560;Name=lod=252	NA	1p35.3	Score=691;Name=V$P53_01	Name=CEBPB	NA	NA	rs111642750	0.02	0.02	0.013	0.0155751	0.0408	NA	0.0346	0.0023	0.0102	0.03	NA	0.03	0.0041	0.0341	0.051	.	.	0.896	P	0.87	P	0.008	N	1.000	D	1.735	L	-1.0	T	-0.313	T	0.245	T	0.16	3.293	17.06	4.31	1.189	4.671	12.426	3.293288	3.293288	0	0.051395	0.011348	NA	0.094	NA	15.2070384
184	16	58318604	58318604	T	C	exonic	PRSS54	NA	nonsynonymous SNV	PRSS54:NM_001080492:exon6:c.A544G:p.S182G	exonic	ENSG00000103023	NA	nonsynonymous SNV	ENSG00000103023:ENST00000543437:exon5:c.A247G:p.S83G,ENSG00000103023:ENST00000569079:exon5:c.A247G:p.S83G,ENSG00000103023:ENST00000219301:exon6:c.A544G:p.S182G,ENSG00000103023:ENST00000567164:exon6:c.A544G:p.S182G,ENSG00000103023:ENST00000569727:exon6:c.A544G:p.S182G	Score=519;Name=lod=172	NA	16q21	Score=901;Name=V$OCT1_06	Name=Egr-1,USF-1	Name=7	NA	rs3815803	0.53	0.53	0.546	0.536941	0.5537	0.3929	0.3718	0.767	0.4744	0.56	0.37	0.41	0.73	0.5209	0.74	0.46	T	0.767	P	0.262	B	0.000	D	0.512	P	1.92	M	0.29	T	-0.948	T	0.000	T	0.375	1.189	9.832	3.28	1.046	1.893	7.458	1.188593	NA	0.12	0.558256	0.742721	ID=COSM148088;OCCURENCE=1(stomach)	0.58	NA	15.2004774
185	22	26222454	26222454	C	T	exonic	MYO18B	NA	nonsynonymous SNV	MYO18B:NM_032608:exon14:c.C2774T:p.S925L	exonic	ENSG00000133454	NA	nonsynonymous SNV	ENSG00000133454:ENST00000335473:exon14:c.C2774T:p.S925L,ENSG00000133454:ENST00000407587:exon14:c.C2774T:p.S925L,ENSG00000133454:ENST00000536101:exon14:c.C2774T:p.S925L	Score=361;Name=lod=39	NA	22q12.1	Score=850;Name=V$ZID_01	NA	NA	NA	rs9624909	0.16	0.16	0.141	0.140974	0.2386	NA	0.1801	0.1838	0.1002	0.25	0.0035	0.21	0.18	0.1851	0.25	0.07	T	0.982	D	0.842	P	0.000	D	0.001	P	1.78	L	-2.32	D	-1.289	T	0.000	T	0.596	4.398	23.3	4.26	1.923	4.541	15.248	4.397818	4.397818	0	0.217124	0.18932	NA	0.203	NA	15.1925094
185	10	91522548	91522548	A	G	exonic	KIF20B	NA	nonsynonymous SNV	KIF20B:NM_016195:exon29:c.A4825G:p.K1609E	exonic	ENSG00000138182	NA	nonsynonymous SNV	ENSG00000138182:ENST00000260753:exon29:c.A4825G:p.K1609E,ENSG00000138182:ENST00000371728:exon29:c.A4945G:p.K1649E,ENSG00000138182:ENST00000394289:exon29:c.A4945G:p.K1649E,ENSG00000138182:ENST00000416354:exon29:c.A5035G:p.K1679E	Score=459;Name=lod=98	NA	10q23.31	Score=963;Name=V$NKX25_02	NA	NA	NA	rs34354493	0.12	0.12	0.119	0.10643	0.2276	0.001	0.1801	0.0098	0.1687	0.23	0.0017	0.2	0.02	0.1845	0.23	0	D	0.971	D	0.814	P	0.001	N	0.000	P	2.095	M	0.24	T	-1.172	T	0.000	T	0.255	5.019	29.6	6.06	2.324	8.147	15.592	5.019322	5.019322	0	0.233953	0.051748	NA	0.145	NA	15.1872804
186	17	28505174	28505174	A	C	exonic	NSRP1	NA	nonsynonymous SNV	NSRP1:NM_001261467:exon3:c.A95C:p.K32T,NSRP1:NM_032141:exon4:c.A257C:p.K86T	exonic	ENSG00000126653	NA	nonsynonymous SNV	ENSG00000126653:ENST00000585881:exon3:c.A95C:p.K32T,ENSG00000126653:ENST00000588614:exon3:c.A95C:p.K32T,ENSG00000126653:ENST00000247026:exon4:c.A257C:p.K86T,ENSG00000126653:ENST00000580103:exon4:c.A95C:p.K32T	Score=633;Name=lod=497	NA	17q11.2	NA	NA	NA	NA	rs11544945	0.03	0.03	0.017	0.0211661	0.0666	0.001	0.036	0.0038	0.0082	0.06	0.0017	0.04	0.01	0.0369	0.06	0.02	D	0.992	D	0.938	D	0.000	D	1.000	D	1.33	L	0.83	T	-1.045	T	0.030	T	0.158	3.723	18.91	3.9	0.829	3.209	9.493	3.723239	3.723239	0.01	0.0569	0.011575	NA	0.014	NA	15.1729334
186	12	10163375	10163375	C	A	exonic	CLEC12B	NA	nonsynonymous SNV	CLEC12B:NM_001129998:exon1:c.C17A:p.T6N,CLEC12B:NM_205852:exon1:c.C17A:p.T6N	exonic	ENSG00000256660	NA	nonsynonymous SNV	ENSG00000256660:ENST00000338896:exon1:c.C17A:p.T6N,ENSG00000256660:ENST00000396502:exon1:c.C17A:p.T6N,ENSG00000256660:ENST00000539155:exon1:c.C17A:p.T6N,ENSG00000256660:ENST00000544853:exon1:c.C17A:p.T6N	Score=395;Name=lod=54	NA	12p13.2	NA	NA	NA	NA	rs1359082	0.34	0.34	0.346	0.3125	0.4245	0.1538	0.3775	0.3896	0.2106	0.43	0.15	0.38	0.39	0.3527	0.43	0.02	D	1.0	D	0.998	D	0.000	D	0.000	P	2.125	M	4.73	T	-0.857	T	0.000	T	0.317	3.543	18.07	4.88	2.652	1.818	14.269	3.542762	3.542762	0.28	0.384419	0.373808	NA	0.413	NA	15.1717144
186	14	20846950	20846950	C	T	exonic	TEP1	NA	nonsynonymous SNV	TEP1:NM_007110:exon37:c.G5315A:p.R1772Q	exonic	ENSG00000129566	NA	nonsynonymous SNV	ENSG00000129566:ENST00000545983:exon8:c.G329A:p.R110Q,ENSG00000129566:ENST00000555008:exon25:c.G3344A:p.R1115Q,ENSG00000129566:ENST00000556935:exon35:c.G4991A:p.R1664Q,ENSG00000129566:ENST00000262715:exon37:c.G5315A:p.R1772Q	Score=448;Name=lod=88	NA	14q11.2	Score=762;Name=V$YY1_02	NA	NA	NA	rs8022805	0.03	0.03	0.029	0.0307508	0.0586	NA	0.0303	0.003	0.0716	0.07	NA	0.03	NA	0.0495	0.07	0.26	T	1.0	D	0.96	D	0.000	D	0.990	D	1.135	L	0.29	T	-1.041	T	0.028	T	0.522	4.29	22.4	4.87	2.724	0.601	9.735	4.290462	4.290462	0.17	0.057791	0.010894	NA	0.007	NA	15.1674424
187	4	25125703	25125703	C	G	exonic	SEPSECS	NA	nonsynonymous SNV	SEPSECS:NM_016955:exon11:c.G1356C:p.K452N	exonic	ENSG00000109618	NA	nonsynonymous SNV	ENSG00000109618:ENST00000302922:exon10:c.G1119C:p.K373N,ENSG00000109618:ENST00000382103:exon11:c.G1356C:p.K452N	Score=557;Name=lod=244	NA	4p15.2	NA	NA	NA	NA	rs2302566	0.1	0.1	0.096	0.11222	0.0567	0.1101	0.1095	0.1626	0.1053	0.06	0.11	0.1	0.15	0.0668	0.15	0.19	T	0.995	D	0.912	D	0.000	D	0.000	P	2.395	M	-1.64	D	-0.825	T	0.008	T	0.054	3.362	17.33	1.05	0.244	1.045	2.888	3.361994	3.361994	0.11	0.045708	0.137767	NA	0.13	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118326.1;CLNDSDB=.;CLNDSDBID=.	15.1641254
187	16	1272750	1272750	G	A	exonic	TPSG1	NA	nonsynonymous SNV	TPSG1:NM_012467:exon4:c.C413T:p.S138F	exonic	ENSG00000116176	NA	nonsynonymous SNV	ENSG00000116176:ENST00000234798:exon4:c.C413T:p.S138F	NA	NA	16p13.3	NA	NA	NA	NA	rs113856625	0.03	0.03	0.023	0.0271565	0.0557	NA	0.0375	NA	0.0552	0.06	NA	0.04	NA	0.0535	0.065	0	D	0.999	D	0.939	D	.	.	0.573	N	3.67	H	-3.43	D	0.025	D	0.512	D	0.195	2.97	15.9	2.47	0.519	0.774	10.531	2.969525	2.969525	0.01	0.065116	0.010687	ID=COSM434651;OCCURENCE=1(breast)	0.043	NA	15.1590174
187	17	39619115	39619115	G	A	exonic	KRT32	NA	nonsynonymous SNV	KRT32:NM_002278:exon6:c.C1184T:p.T395M	exonic	ENSG00000108759	NA	nonsynonymous SNV	ENSG00000108759:ENST00000225899:exon6:c.C1184T:p.T395M	Score=412;Name=lod=63	NA	17q21.2	NA	NA	NA	NA	rs2071563	0.4	0.4	0.372	0.36881	0.4245	0.3363	0.402	0.4259	0.2444	0.43	0.36	0.35	0.43	0.3754	0.43	0.01	D	1.0	D	1.0	D	0.001	N	0.285	P	3.625	H	-2.95	D	-1.530	T	0.000	T	0.395	3.401	17.48	5.07	2.493	2.380	17.801	3.400513	3.400513	0.01	0.375116	0.410576	NA	0.413	NA	15.1583174
187	14	24534916	24534916	G	T	exonic	LRRC16B	NA	nonsynonymous SNV	LRRC16B:NM_138360:exon34:c.G3482T:p.G1161V	exonic	ENSG00000186648	NA	nonsynonymous SNV	ENSG00000186648:ENST00000342740:exon34:c.G3482T:p.G1161V	Score=366;Name=lod=41	NA	14q11.2	NA	NA	NA	NA	rs79328356	0.03	0.03	0.026	0.0195687	0.0616	0.003	0.0245	0.003	0.0123	0.06	0.0017	0.03	0.0041	0.0476	0.067	0.01	D	1.0	D	0.998	D	0.005	N	1.000	D	0.55	N	2.25	T	-1.150	T	0.006	T	0.242	3.645	18.54	4.51	1.272	1.806	9.756	3.645209	3.645209	0.01	0.066744	0.014299	NA	0.007	NA	15.1573894
188	20	44352620	44352620	G	A	exonic	SPINT4	NA	nonsynonymous SNV	SPINT4:NM_178455:exon2:c.G217A:p.G73S	exonic	ENSG00000149651	NA	nonsynonymous SNV	ENSG00000149651:ENST00000279058:exon2:c.G217A:p.G73S	Score=381;Name=lod=47	NA	20q13.12	Score=887;Name=V$RFX1_02	NA	NA	NA	rs6017667	0.47	0.47	0.488	0.519768	0.3857	0.4742	0.3199	0.7231	0.5716	0.36	0.48	0.35	0.74	0.4262	0.74	0	D	1.0	D	1.0	D	0.000	D	0.296	P	.	.	-0.36	T	-0.881	T	0.000	T	0.296	2.927	15.75	4.47	2.486	3.976	12.851	2.926993	2.926993	0	0.374767	0.641171	NA	0.442	NA	15.1466664
189	2	3392295	3392295	A	G	exonic	TRAPPC12	NA	nonsynonymous SNV	TRAPPC12:NM_016030:exon2:c.A901G:p.S301G	exonic	ENSG00000171853	NA	nonsynonymous SNV	ENSG00000171853:ENST00000324266:exon2:c.A901G:p.S301G,ENSG00000171853:ENST00000382110:exon2:c.A901G:p.S301G	Score=556;Name=lod=242	NA	2p25.3	NA	NA	NA	NA	rs11686212	0.44	0.44	0.425	0.467851	0.4006	0.6081	0.3141	0.4175	0.5695	0.39	0.61	0.35	0.4	0.4144	0.61	0.02	D	0.998	D	0.969	D	0.000	D	0.000	P	2.215	M	0.24	T	-0.854	T	0.000	T	0.258	4.89	28.1	5.07	2.248	8.568	14.455	4.889728	4.889728	0	0.37407	0.412846	ID=COSM442851;OCCURENCE=2(breast)	0.493	NA	15.1442634
189	2	197521750	197521750	G	A	exonic	CCDC150	NA	nonsynonymous SNV	CCDC150:NM_001080539:exon4:c.G466A:p.E156K	exonic	ENSG00000144395	NA	nonsynonymous SNV	ENSG00000144395:ENST00000472405:exon3:c.G157A:p.E53K,ENSG00000144395:ENST00000389175:exon4:c.G466A:p.E156K	Score=474;Name=lod=113	NA	2q33.1	NA	NA	NA	NA	rs34133636	0.08	0.08	0.065	0.105431	0.0596	0.0238	0.0634	0.1929	0.1483	0.06	0.03	0.07	0.15	0.0788	0.16	0.4	T	1.0	D	0.994	D	0.000	D	0.000	P	1.935	M	1.54	T	-1.093	T	0.001	T	0.439	2.179	13.24	3.88	1.199	4.205	12.594	2.178777	2.178777	0	0.053309	0.160051	ID=COSM149033;OCCURENCE=1(stomach)	0.188	NA	15.1416244
190	9	104152846	104152846	G	A	exonic	MRPL50	NA	nonsynonymous SNV	MRPL50:NM_019051:exon2:c.C379T:p.L127F	exonic	ENSG00000136897	NA	nonsynonymous SNV	ENSG00000136897:ENST00000374865:exon2:c.C379T:p.L127F	Score=525;Name=lod=181	NA	9q31.1	NA	NA	NA	NA	rs8131	0.06	0.06	0.056	0.0654952	0.0736	0.1111	0.0375	0.0038	0.1135	0.07	0.11	0.04	0.01	0.0658	0.11	0.05	D	0.999	D	0.972	D	0.007	N	0.000	P	2.215	M	0.8	T	-1.008	T	0.009	T	0.177	3.688	18.74	4.96	2.793	1.279	15.775	3.687591	3.687591	0.07	0.064798	0.011802	NA	0.065	NA	15.1291354
190	3	167068256	167068256	T	A	exonic	ZBBX	NA	nonsynonymous SNV	ZBBX:NM_001199201:exon9:c.A480T:p.K160N,ZBBX:NM_001199202:exon9:c.A393T:p.K131N,ZBBX:NM_024687:exon9:c.A480T:p.K160N	exonic	ENSG00000169064	NA	nonsynonymous SNV	ENSG00000169064:ENST00000307529:exon6:c.A480T:p.K160N,ENSG00000169064:ENST00000392767:exon6:c.A480T:p.K160N,ENSG00000169064:ENST00000455345:exon8:c.A480T:p.K160N,ENSG00000169064:ENST00000474464:exon8:c.A480T:p.K160N,ENSG00000169064:ENST00000392764:exon9:c.A393T:p.K131N,ENSG00000169064:ENST00000392766:exon9:c.A480T:p.K160N	Score=542;Name=lod=212	NA	3q26.1	NA	Name=SMC3_(ab9263),CTCF_(SC-5916),Rad21,CTCF	Name=52	NA	rs4619784	0.27	0.27	0.26	0.255192	0.4076	0.1756	0.3343	0.0756	0.3671	0.4	0.18	0.35	0.12	0.3725	0.43	0.01	D	0.997	D	0.972	D	0.089	U	0.033	P	1.1	L	1.54	T	-0.920	T	0.000	T	0.162	4.066	20.9	5.54	2.101	2.674	13.640	4.065775	4.065775	0.01	0.426362	0.130867	NA	0.326	NA	15.1268714
191	16	56660816	56660816	G	A	exonic	MT1E	NA	nonsynonymous SNV	MT1E:NM_175617:exon3:c.G119A:p.G40D	exonic	ENSG00000169715	NA	nonsynonymous SNV	ENSG00000169715:ENST00000568293:exon2:c.G53A:p.G18D,ENSG00000169715:ENST00000306061:exon3:c.G119A:p.G40D	Score=532;Name=lod=194	NA	16q12.2	NA	Name=Pol2	NA	NA	rs72818417	0.04	0.04	0.024	0.0375399	0.0775	NA	0.0648	0.0008	0.0654	0.08	NA	0.06	0.002	0.0691	0.08	0.02	D	0.854	P	0.746	P	.	.	1.000	D	.	.	2.89	T	-1.162	T	0.003	T	0.274	1.955	12.49	2.39	1.334	4.596	6.545	1.955021	1.955021	0.02	0.076279	0.015469	NA	0.123	NA	15.1104544
191	14	20444026	20444026	T	G	exonic	OR4K15	NA	nonsynonymous SNV	OR4K15:NM_001005486:exon1:c.T349G:p.S117A	exonic	ENSG00000169488	NA	nonsynonymous SNV	ENSG00000169488:ENST00000305051:exon1:c.T349G:p.S117A	Score=243;Name=lod=13	NA	14q11.2	NA	NA	NA	NA	rs3861513	0.18	0.18	0.164	0.218251	0.2227	0.123	0.1715	0.2141	0.3507	0.23	0.12	0.18	0.19	0.2369	0.27	0.01	D	0.998	D	0.872	P	0.000	D	0.976	P	3.31	M	5.82	T	-0.992	T	0.000	T	0.141	2.823	15.4	3.8	1.578	1.743	10.536	2.823282	2.823282	0.01	0.265589	0.240127	NA	0.196	NA	15.1081444
192	2	233243586	233243586	C	T	exonic	ALPP	NA	nonsynonymous SNV	ALPP:NM_001632:exon1:c.C74T:p.P25L	exonic	ENSG00000163283	NA	nonsynonymous SNV	ENSG00000163283:ENST00000392027:exon1:c.C74T:p.P25L	NA	NA	2q37.1	NA	NA	NA	NA	rs1130335	0.1	0.1	0.069	0.0844649	0.0726	0.2153	0.0533	0.025	0.0644	0.08	0.21	0.04	0.03	0.0819	0.21	0.03	D	1.0	D	0.994	D	0.000	D	0.148	P	2.815	M	-1.75	D	-1.033	T	0.002	T	0.106	2.46	14.18	1.8	1.299	-0.094	7.512	2.459635	2.459635	0.03	0.081163	0.041534	NA	0.152	CLINSIG=non-pathogenic|pathogenic;CLNDBN=ALKALINE_PHOSPHATASE\x2c_PLACENTAL\x2c_ALLELE-1_POLYMORPHISM|ALPP*1,ALKALINE_PHOSPHATASE\x2c_PLACENTAL\x2c_ALLELE-3_POLYMORPHISM|ALPP*3;CLNREVSTAT=single|single,single|single;CLNACC=RCV000014644.1|RCV000014645.24,RCV000014646.1|RCV000014647.24;CLNDSDB=.|.,.|.;CLNDSDBID=.|.,.|.	15.0976704
193	7	142750147	142750147	C	T	exonic	OR6V1	NA	nonsynonymous SNV	OR6V1:NM_001001667:exon1:c.C710T:p.S237F	exonic	ENSG00000225781	NA	nonsynonymous SNV	ENSG00000225781:ENST00000418316:exon1:c.C710T:p.S237F	Score=317;Name=lod=26	NA	7q34	NA	NA	NA	NA	rs10245778	0.08	0.08	0.079	0.081869	0.0815	0.0347	0.0663	0.1225	0.0869	0.07	0.04	0.08	0.13	0.0803	0.13	0	D	1.0	D	1.0	D	.	.	0.989	P	3.115	M	8.15	T	-0.909	T	0.000	T	0.126	2.555	14.5	3.84	1.216	1.563	10.300	2.555326	2.555326	0	0.082678	0.122803	NA	0.058	NA	15.0888554
194	3	10331457	10331457	G	T	exonic	GHRL	NA	nonsynonymous SNV	GHRL:NM_001134944:exon2:c.C178A:p.L60M,GHRL:NM_001134945:exon2:c.C175A:p.L59M,GHRL:NM_001134941:exon3:c.C211A:p.L71M,GHRL:NM_016362:exon3:c.C214A:p.L72M	exonic	ENSG00000157017	NA	nonsynonymous SNV	ENSG00000157017:ENST00000422159:exon2:c.C214A:p.L72M,ENSG00000157017:ENST00000437422:exon2:c.C178A:p.L60M,ENSG00000157017:ENST00000449238:exon2:c.C175A:p.L59M,ENSG00000157017:ENST00000449554:exon3:c.C211A:p.L71M,ENSG00000157017:ENST00000450603:exon3:c.C214A:p.L72M,ENSG00000157017:ENST00000287656:exon4:c.C211A:p.L71M,ENSG00000157017:ENST00000335542:exon4:c.C214A:p.L72M,ENSG00000157017:ENST00000429122:exon4:c.C214A:p.L72M,ENSG00000157017:ENST00000430179:exon4:c.C211A:p.L71M,ENSG00000157017:ENST00000457360:exon4:c.C214A:p.L72M	Score=259;Name=lod=15	NA	3p25.3	NA	NA	NA	NA	rs696217	0.09	0.09	0.099	0.0832668	0.0875	0.1915	0.0476	0.0091	0.093	0.08	0.19	0.06	0.01	0.0856	0.19	0.13	T	1.0	D	0.999	D	0.068	N	0.000	P	2.34	M	1.38	T	-1.041	T	0.001	T	0.323	2.305	13.66	3.44	2.261	1.622	8.378	2.30467	2.30467	0.02	0.077093	0.02315	NA	0.087	CLINSIG=pathogenic|other;CLNDBN=Obesity\x2c_age_at_onset_of|Metabolic_syndrome\x2c_susceptibility_to;CLNREVSTAT=single|single;CLNACC=RCV000005365.1|RCV000005366.1;CLNDSDB=.|.;CLNDSDBID=.|.	15.0831404
194	2	24439048	24439048	A	G	exonic	ITSN2	NA	nonsynonymous SNV	ITSN2:NM_019595:exon31:c.T3779C:p.I1260T,ITSN2:NM_006277:exon32:c.T3860C:p.I1287T	exonic	ENSG00000198399	NA	nonsynonymous SNV	ENSG00000198399:ENST00000361999:exon31:c.T3779C:p.I1260T,ENSG00000198399:ENST00000355123:exon32:c.T3860C:p.I1287T	Score=440;Name=lod=82	NA	2p23.3	Score=787;Name=V$COMP1_01	NA	NA	NA	rs3731625	0.07	0.07	0.068	0.0654952	0.0895	0.0784	0.0548	0.0401	0.0695	0.09	0.08	0.07	0.05	0.0785	0.09	0.01	D	0.4	B	0.382	B	0.080	U	1.000	D	3.065	M	-0.46	T	-0.704	T	0.034	T	0.347	3.883	19.74	5.38	2.189	8.850	15.759	3.883479	3.883479	0	0.083721	0.047662	ID=COSM148811;OCCURENCE=1(stomach)	0.036	NA	15.0816124
195	10	129690826	129690826	A	T	exonic	CLRN3	NA	nonsynonymous SNV	CLRN3:NM_152311:exon1:c.T223A:p.F75I	exonic	ENSG00000180745	NA	nonsynonymous SNV	ENSG00000180745:ENST00000368671:exon1:c.T223A:p.F75I	Score=371;Name=lod=43	NA	10q26.2	NA	NA	NA	NA	rs35070529	0.05	0.05	0.042	0.0365415	0.1083	NA	0.062	0.0106	0.0174	0.1	NA	0.06	0.02	0.0651	0.1	0.32	T	1.0	D	0.999	D	0.000	D	0.000	P	2.31	M	-1.12	T	-0.644	T	0.044	T	0.269	3.113	16.4	5.52	2.323	4.942	13.273	3.113079	3.113079	0	0.091977	0.017703	NA	0.116	NA	15.0679564
196	12	31256517	31256517	C	T	exonic	DDX11	NA	nonsynonymous SNV	DDX11:NM_004399:exon25:c.C2393T:p.A798V,DDX11:NM_001257145:exon26:c.C2465T:p.A822V,DDX11:NM_030653:exon26:c.C2543T:p.A848V	exonic	ENSG00000013573	NA	nonsynonymous SNV	ENSG00000013573:ENST00000350437:exon25:c.C2393T:p.A798V,ENSG00000013573:ENST00000228264:exon26:c.C2465T:p.A822V,ENSG00000013573:ENST00000542838:exon26:c.C2543T:p.A848V	Score=511;Name=lod=159	NA	12p11.21	Score=924;Name=V$HOXA3_01	NA	NA	NA	rs140335402	0.05	0.05	NA	0.0423323	0.1113	0.002	0.0778	0.0098	0.0317	0.1	0.0017	0.08	0.02	0.0725	0.1	0.01	D	1.0	D	0.999	D	0.489	N	0.000	P	1.385	L	-0.8	T	-1.053	T	0.005	T	.	0.074	4.403	3.14	1.582	6.568	11.816	0.074498	NA	0	0.099324	0.016018	ID=COSM1318019,COSM1318020;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	NA	NA	15.0502094
197	5	78181477	78181477	C	T	exonic	ARSB	NA	nonsynonymous SNV	ARSB:NM_000046:exon5:c.G1072A:p.V358M,ARSB:NM_198709:exon6:c.G1072A:p.V358M	exonic	ENSG00000113273	NA	nonsynonymous SNV	ENSG00000113273:ENST00000264914:exon5:c.G1072A:p.V358M,ENSG00000113273:ENST00000396151:exon6:c.G1072A:p.V358M,ENSG00000113273:ENST00000565165:exon6:c.G1072A:p.V358M	Score=272;Name=lod=17	NA	5q14.1	NA	NA	NA	NA	rs1065757	0.34	0.34	0.301	0.285543	0.4662	0.372	0.4294	0.0371	0.2444	0.45	0.39	0.43	0.04	0.3907	0.45	0.13	T	1.0	D	0.994	D	0.000	D	0.000	P	1.57	L	-4.96	D	-1.542	T	0.000	T	0.323	4.122	21.3	5.46	2.555	3.985	18.284	4.12179	4.12179	0.13	0.432442	0.114389	NA	0.29	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000077997.1;CLNDSDB=.;CLNDSDBID=.	15.0439914
197	6	136589448	136589448	C	A	exonic	BCLAF1	NA	nonsynonymous SNV	BCLAF1:NM_001077440:exon10:c.G2243T:p.R748L,BCLAF1:NM_001077441:exon10:c.G1730T:p.R577L,BCLAF1:NM_014739:exon10:c.G2249T:p.R750L	exonic	ENSG00000029363	NA	nonsynonymous SNV	ENSG00000029363:ENST00000392348:exon8:c.G2243T:p.R748L,ENSG00000029363:ENST00000353331:exon10:c.G2243T:p.R748L,ENSG00000029363:ENST00000527536:exon10:c.G2249T:p.R750L,ENSG00000029363:ENST00000527759:exon10:c.G2243T:p.R748L,ENSG00000029363:ENST00000530767:exon10:c.G1730T:p.R577L,ENSG00000029363:ENST00000531224:exon10:c.G2249T:p.R750L	Score=683;Name=lod=793	NA	6q23.3	NA	NA	NA	NA	rs78267720	NA	NA	0.128	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2922	NA	0.21	T	0.998	D	0.965	D	0.000	D	1.000	D	1.495	L	2.54	T	-1.158	T	0.049	T	0.752	3.53	18.02	4.97	2.478	4.587	16.767	3.529872	3.529872	0.09	NA	NA	NA	NA	NA	15.0411334
197	6	31118898	31118898	A	T	exonic	CCHCR1	NA	nonsynonymous SNV	CCHCR1:NM_001105563:exon5:c.T695A:p.L232Q,CCHCR1:NM_001105564:exon5:c.T803A:p.L268Q,CCHCR1:NM_019052:exon5:c.T536A:p.L179Q	exonic	ENSG00000204536	NA	nonsynonymous SNV	ENSG00000204536:ENST00000507459:exon4:c.T232A:p.C78S,ENSG00000204536:ENST00000508852:exon4:c.T232A:p.C78S,ENSG00000204536:ENST00000512418:exon4:c.T124A:p.C42S,ENSG00000204536:ENST00000376266:exon5:c.T536A:p.L179Q,ENSG00000204536:ENST00000396263:exon5:c.T536A:p.L179Q,ENSG00000204536:ENST00000396268:exon5:c.T803A:p.L268Q,ENSG00000204536:ENST00000448141:exon5:c.T428A:p.L143Q,ENSG00000204536:ENST00000448162:exon5:c.T536A:p.L179Q,ENSG00000204536:ENST00000451521:exon5:c.T695A:p.L232Q,ENSG00000204536:ENST00000508683:exon5:c.T428A:p.L143Q	Score=265;Name=lod=16	NA	6p21.33	NA	NA	NA	NA	rs11540822	0.08	0.08	0.043	0.0640974	0.1123	0.0347	0.134	0.0076	0.0716	0.12	0.04	0.14	0.01	0.0955	0.14	0.01	D	1.0	D	0.999	D	0.380	N	0.924	P	2.08	M	3.51	T	-1.125	T	0.031	T	0.482	2.905	15.68	4.34	1.638	4.235	10.012	2.90538	2.90538	0	0.085456	0.023541	NA	0.022	NA	15.0400774
197	2	71163086	71163086	T	C	exonic	ATP6V1B1	NA	nonsynonymous SNV	ATP6V1B1:NM_001692:exon1:c.T2C:p.M1T	exonic	ENSG00000116039	NA	nonsynonymous SNV	ENSG00000116039:ENST00000234396:exon1:c.T2C:p.M1T,ENSG00000116039:ENST00000412314:exon1:c.T2C:p.M1T,ENSG00000116039:ENST00000432367:exon1:c.T2C:p.M1T	Score=309;Name=lod=24	NA	2p13.3	NA	NA	NA	NA	rs11681642	0.39	0.39	0.382	0.36881	0.4473	0.3591	0.2939	0.3714	0.3476	0.46	0.36	0.31	0.4	0.4095	0.46	0	D	0.826	P	0.599	P	0.000	D	1.000	P	.	.	-1.61	D	-1.075	T	0.000	T	0.381	2.252	13.49	4.9	1.834	2.696	12.500	2.251676	2.251676	0	0.436512	0.373128	NA	0.13	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000037207.1;CLNDSDB=.;CLNDSDBID=.	15.0400214
197	7	47913560	47913560	G	T	exonic	PKD1L1	NA	nonsynonymous SNV	PKD1L1:NM_138295:exon24:c.C3833A:p.P1278Q	exonic	ENSG00000158683	NA	nonsynonymous SNV	ENSG00000158683:ENST00000289672:exon24:c.C3833A:p.P1278Q	Score=272;Name=lod=17	NA	7p12.3	Score=726;Name=V$PPARG_01	NA	Name=67	NA	rs78833972	0.07	0.07	0.054	0.0922524	0.0905	0.0823	0.1643	0.003	0.1738	0.09	0.07	0.13	0.002	0.1077	0.13	0.06	T	1.0	D	0.997	D	0.010	N	0.000	P	1.845	L	-0.29	T	-0.904	T	0.008	T	0.186	3.221	16.79	4.28	2.300	1.433	15.005	3.220644	3.220644	0.08	0.098605	0.018384	NA	0.036	NA	15.0365284
197	1	207109116	207109116	C	T	exonic	PIGR	NA	nonsynonymous SNV	PIGR:NM_002644:exon5:c.G1093A:p.G365S	exonic	ENSG00000162896	NA	nonsynonymous SNV	ENSG00000162896:ENST00000356495:exon5:c.G1093A:p.G365S	Score=349;Name=lod=35	NA	1q32.1	Score=734;Name=V$SEF1_C	Name=CTCF,Rad21,SMC3_(ab9263),CTCF_(SC-5916),YY1_(C-20)	Name=63	NA	rs2275531	0.35	0.35	0.339	0.296326	0.4563	0.3284	0.3271	0.1944	0.2147	0.45	0.31	0.37	0.23	0.3833	0.46	0.13	T	1.0	D	1.0	D	0.001	N	0.357	P	2.305	M	3.66	T	-0.911	T	0.000	T	0.07	2.778	15.25	4.64	1.352	0.601	8.687	2.77791	2.77791	0.13	0.457907	0.218665	ID=COSM425158;OCCURENCE=1(breast)	0.449	NA	15.0358264
198	16	57735900	57735900	G	C	exonic	CCDC135	NA	nonsynonymous SNV	CCDC135:NM_032269:exon5:c.G557C:p.C186S	exonic	ENSG00000159625	NA	nonsynonymous SNV	ENSG00000159625:ENST00000569167:exon4:c.G146C:p.C49S,ENSG00000159625:ENST00000394337:exon5:c.G557C:p.C186S,ENSG00000159625:ENST00000360716:exon6:c.G557C:p.C186S	Score=433;Name=lod=77	NA	16q21	Score=830;Name=V$ISRE_01	Name=PU.1	Name=6	NA	rs7196016	0.28	0.28	0.275	0.284545	0.2604	0.376	0.2824	0.2368	0.2812	0.27	0.38	0.27	0.19	0.285	0.38	0.28	T	0.585	P	0.12	B	0.000	D	0.000	P	0.735	N	0.41	T	-0.951	T	0.000	T	0.499	2.172	13.22	4.11	1.095	9.207	14.472	2.171631	2.171631	0.19	0.253256	0.263876	NA	0.196	NA	15.0346774
198	2	170003432	170003432	T	G	exonic	LRP2	NA	nonsynonymous SNV	LRP2:NM_004525:exon69:c.A12628C:p.I4210L	exonic	ENSG00000081479	NA	nonsynonymous SNV	ENSG00000081479:ENST00000263816:exon69:c.A12628C:p.I4210L	Score=536;Name=lod=202	NA	2q31.1	NA	NA	NA	NA	rs4667591	0.54	0.54	0.5	0.555911	0.7932	0.4901	0.7277	0.146	0.8119	0.79	0.45	0.72	0.14	0.7176	0.79	0.03	D	0.995	D	0.992	D	0.000	N	0.000	P	3.105	M	-3.03	D	-0.903	T	0.000	T	0.301	4.841	27.5	4.5	0.957	6.284	12.950	4.841405	4.841405	0.07	0.790116	0.24217	ID=COSM1401028;OCCURENCE=1(large_intestine)	0.587	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117509.2;CLNDSDB=.;CLNDSDBID=.	15.0324174
199	2	138759649	138759649	C	T	exonic	HNMT	NA	nonsynonymous SNV	HNMT:NM_006895:exon4:c.C314T:p.T105I	exonic	ENSG00000150540	NA	nonsynonymous SNV	ENSG00000150540:ENST00000280097:exon4:c.C314T:p.T105I,ENSG00000150540:ENST00000410115:exon5:c.C314T:p.T105I	Score=487;Name=lod=127	NA	2q22.1	NA	NA	NA	NA	rs11558538	0.06	0.06	0.056	0.0595048	0.1044	0.0317	0.0778	0.003	0.1053	0.1	0.03	0.07	0.0041	0.1017	0.1	0.4	T	0.729	P	0.602	P	0.001	N	1.000	D	2.125	M	0.99	T	-1.146	T	0.007	T	0.396	4.102	21.1	5.27	1.580	5.284	15.171	4.101588	4.101588	0.01	0.104767	0.023831	NA	0.08	CLINSIG=other;CLNDBN=Asthma\x2c_susceptibility_to;CLNREVSTAT=single;CLNACC=RCV000005467.1;CLNDSDB=MedGen:OMIM;CLNDSDBID=C1869116:600807	15.0224664
199	20	34218673	34218673	G	C	exonic	CPNE1	NA	nonsynonymous SNV	CPNE1:NM_001198863:exon12:c.C1040G:p.P347R,CPNE1:NM_003915:exon12:c.C1055G:p.P352R,CPNE1:NM_152925:exon12:c.C1040G:p.P347R,CPNE1:NM_152926:exon12:c.C1040G:p.P347R,CPNE1:NM_152927:exon13:c.C1040G:p.P347R,CPNE1:NM_152928:exon13:c.C1040G:p.P347R	exonic	ENSG00000214078	NA	nonsynonymous SNV	ENSG00000214078:ENST00000430570:exon11:c.C968G:p.P323R,ENSG00000214078:ENST00000317677:exon12:c.C1055G:p.P352R,ENSG00000214078:ENST00000397442:exon12:c.C1040G:p.P347R,ENSG00000214078:ENST00000397443:exon12:c.C1040G:p.P347R,ENSG00000214078:ENST00000401607:exon12:c.C1040G:p.P347R,ENSG00000214078:ENST00000437340:exon12:c.C1040G:p.P347R,ENSG00000214078:ENST00000397445:exon13:c.C1040G:p.P347R,ENSG00000214078:ENST00000397446:exon13:c.C1040G:p.P347R,ENSG00000214078:ENST00000317619:exon14:c.C1040G:p.P347R,ENSG00000214078:ENST00000352393:exon14:c.C1040G:p.P347R	Score=547;Name=lod=222	NA	20q11.22	Score=902;Name=V$NFY_C	NA	NA	NA	rs12481228	0.09	0.09	0.068	0.103634	0.1004	0.0833	0.1225	0.0749	0.1534	0.1	0.07	0.13	0.06	0.1061	0.13	0.02	D	0.763	P	0.656	P	0.000	U	0.000	P	2.55	M	2.0	T	-1.219	T	0.002	T	0.566	4.759	26.7	5.32	2.767	9.577	18.785	4.759408	4.759408	0.01	0.106395	0.087154	NA	0.094	NA	15.0204384
199	1	156351699	156351699	G	A	exonic	RHBG	NA	nonsynonymous SNV	RHBG:NM_020407:exon6:c.G943A:p.G315R,RHBG:NM_001256395:exon7:c.G736A:p.G246R,RHBG:NM_001256396:exon7:c.G853A:p.G285R	exonic	ENSG00000132677	NA	nonsynonymous SNV	ENSG00000132677:ENST00000537040:exon3:c.G457A:p.G153R,ENSG00000132677:ENST00000368246:exon6:c.G943A:p.G315R,ENSG00000132677:ENST00000368249:exon6:c.G943A:p.G315R,ENSG00000132677:ENST00000400992:exon6:c.G847A:p.G283R,ENSG00000132677:ENST00000255013:exon7:c.G736A:p.G246R	Score=595;Name=lod=348	NA	1q22	NA	NA	NA	NA	rs3748569	0.55	0.55	0.555	0.544728	0.4095	0.7014	0.6037	0.5719	0.4438	0.41	0.7	0.57	0.58	0.48	0.7	0.01	D	1.0	D	1.0	D	0.000	D	0.000	P	3.455	M	1.12	T	-0.251	T	0.288	T	0.829	4.745	26.5	4.44	2.286	7.438	14.590	4.744673	4.744673	0	0.425291	0.526125	NA	0.616	NA	15.0185424
199	1	28282292	28282292	T	C	exonic	SMPDL3B	NA	nonsynonymous SNV	SMPDL3B:NM_001009568:exon6:c.T788C:p.V263A,SMPDL3B:NM_014474:exon6:c.T788C:p.V263A	exonic	ENSG00000130768	NA	nonsynonymous SNV	ENSG00000130768:ENST00000549094:exon5:c.T644C:p.V215A,ENSG00000130768:ENST00000373888:exon6:c.T788C:p.V263A,ENSG00000130768:ENST00000373894:exon6:c.T788C:p.V263A	Score=336;Name=lod=31	NA	1p35.3	NA	NA	NA	NA	rs3813803	0.22	0.22	0.176	0.186302	0.2684	0.2123	0.255	0.0703	0.183	0.28	0.24	0.25	0.08	0.2507	0.3	0.06	T	0.992	D	0.814	P	0.000	D	0.420	P	2.095	M	-3.1	D	-1.516	T	0.000	T	0.33	3.409	17.52	5.34	2.009	7.608	15.291	3.409377	3.409377	0.01	0.296395	0.105311	NA	0.13	NA	15.0178384
199	22	50319170	50319170	A	G	exonic	CRELD2	NA	nonsynonymous SNV	CRELD2:NM_024324:exon9:c.A974G:p.E325G,CRELD2:NM_001135101:exon10:c.A1121G:p.E374G	exonic	ENSG00000184164	NA	nonsynonymous SNV	ENSG00000184164:ENST00000403427:exon8:c.A890G:p.E297G,ENSG00000184164:ENST00000407217:exon8:c.A878G:p.E293G,ENSG00000184164:ENST00000328268:exon9:c.A974G:p.E325G,ENSG00000184164:ENST00000404488:exon10:c.A1121G:p.E374G	Score=259;Name=lod=15	NA	22q13.33	NA	Name=EBF,NFKB,EBF1_(C-8)	NA	NA	rs11545763	0.08	0.08	0.076	0.067492	0.1193	0.0546	0.0735	0.0045	0.1084	0.13	0.06	0.09	0.01	0.093	0.13	0.28	T	0.998	D	0.947	D	0.042	U	0.042	P	-1.18	N	-3.05	D	-0.520	T	0.016	T	0.213	3.084	16.3	4.41	1.667	5.457	12.782	3.083826	3.083826	0.07	0.104419	0.02315	ID=COSM149319;OCCURENCE=1(stomach)	0.174	NA	15.0166144
200	1	111857208	111857208	G	A	exonic	CHIA	NA	nonsynonymous SNV	CHIA:NM_201653:exon5:c.G304A:p.G102R	exonic	ENSG00000134216	NA	nonsynonymous SNV	ENSG00000134216:ENST00000422815:exon2:c.G136A:p.G46R,ENSG00000134216:ENST00000343320:exon4:c.G304A:p.G102R,ENSG00000134216:ENST00000369740:exon5:c.G304A:p.G102R	Score=547;Name=lod=222	NA	1p13.2	NA	NA	NA	NA	rs3818822	0.11	0.11	0.099	0.129593	0.0984	0.0933	0.0807	0.1936	0.1472	0.08	0.09	0.09	0.17	0.1131	0.17	0	D	1.0	D	0.998	D	0.000	N	0.000	P	3.725	H	3.38	T	-0.895	T	0.070	T	0.49	3.918	19.93	4.56	2.233	8.823	15.193	3.918008	3.918008	0	0.107291	0.16284	NA	0.159	NA	15.0145424
200	12	114282496	114282496	C	T	exonic	RBM19	NA	nonsynonymous SNV	RBM19:NM_001146698:exon23:c.G2762A:p.R921Q,RBM19:NM_001146699:exon23:c.G2762A:p.R921Q,RBM19:NM_016196:exon23:c.G2762A:p.R921Q	exonic	ENSG00000122965	NA	nonsynonymous SNV	ENSG00000122965:ENST00000552384:exon2:c.G212A:p.R71Q,ENSG00000122965:ENST00000261741:exon23:c.G2762A:p.R921Q,ENSG00000122965:ENST00000392561:exon23:c.G2762A:p.R921Q,ENSG00000122965:ENST00000545145:exon23:c.G2762A:p.R921Q	Score=492;Name=lod=133	NA	12q24.13	NA	NA	NA	NA	rs2075387	0.22	0.22	0.196	0.219649	0.3002	0.131	0.2032	0.1815	0.2914	0.31	0.14	0.2	0.2	0.2493	0.31	0.05	D	0.997	D	0.86	P	0.000	D	0.000	P	1.935	M	3.47	T	-0.939	T	0.000	T	0.699	4.144	21.4	5.11	2.368	4.408	18.155	4.143675	4.143675	0.02	0.269884	0.176123	NA	0.232	NA	15.0139494
200	5	42719239	42719239	A	C	exonic	GHR	NA	nonsynonymous SNV	GHR:NM_001242460:exon8:c.A1564C:p.I522L,GHR:NM_001242406:exon9:c.A1630C:p.I544L,GHR:NM_000163:exon10:c.A1630C:p.I544L,GHR:NM_001242399:exon10:c.A1651C:p.I551L,GHR:NM_001242402:exon10:c.A1630C:p.I544L,GHR:NM_001242403:exon10:c.A1630C:p.I544L,GHR:NM_001242404:exon10:c.A1630C:p.I544L,GHR:NM_001242405:exon10:c.A1630C:p.I544L,GHR:NM_001242400:exon11:c.A1630C:p.I544L,GHR:NM_001242401:exon11:c.A1630C:p.I544L	exonic	ENSG00000112964	NA	nonsynonymous SNV	ENSG00000112964:ENST00000537449:exon8:c.A1069C:p.I357L,ENSG00000112964:ENST00000357703:exon9:c.A1564C:p.I522L,ENSG00000112964:ENST00000230882:exon10:c.A1630C:p.I544L	Score=429;Name=lod=74	NA	5p12	Score=727;Name=V$PAX4_04	NA	Name=2	NA	rs6180	0.44	0.44	0.432	0.444489	0.4185	0.5694	0.4006	0.379	0.4622	0.4	0.58	0.41	0.37	0.4434	0.58	0.08	T	0.933	P	0.897	P	0.074	N	1.000	P	3.585	H	1.3	T	-0.908	T	0.000	T	0.286	2.482	14.26	3.43	1.135	1.574	5.415	2.482225	2.482225	0.01	0.460581	0.389015	NA	0.406	CLINSIG=other;CLNDBN=Familial_hypercholesterolemia;CLNREVSTAT=single;CLNACC=RCV000009190.1;CLNDSDB=MedGen:OMIM:OMIM:SNOMED_CT:SNOMED_CT;CLNDSDBID=C0020445:143890:144400:397915002:398036000	15.0108524
200	4	162307312	162307312	C	A	exonic	FSTL5	NA	nonsynonymous SNV	FSTL5:NM_001128428:exon15:c.G2101T:p.D701Y,FSTL5:NM_001128427:exon16:c.G2128T:p.D710Y,FSTL5:NM_020116:exon16:c.G2131T:p.D711Y	exonic	ENSG00000168843	NA	nonsynonymous SNV	ENSG00000168843:ENST00000427802:exon15:c.G2101T:p.D701Y,ENSG00000168843:ENST00000536695:exon15:c.G2128T:p.D710Y,ENSG00000168843:ENST00000306100:exon16:c.G2131T:p.D711Y,ENSG00000168843:ENST00000379164:exon16:c.G2128T:p.D710Y	Score=446;Name=lod=87	NA	4q32.2	NA	NA	NA	NA	rs3749598	0.09	0.09	0.084	0.0910543	0.1203	0.0704	0.121	0.0628	0.0992	0.12	0.06	0.1	0.08	0.1085	0.12	0.01	D	1.0	D	0.976	D	0.000	D	0.000	P	1.995	M	1.6	T	-1.046	T	0.003	T	0.818	3.021	16.08	3.98	0.771	4.524	11.527	3.02145	3.02145	0.01	0.09686	0.067181	NA	0.08	NA	15.0076734
200	10	123970722	123970722	T	A	exonic	TACC2	NA	nonsynonymous SNV	TACC2:NM_006997:exon3:c.T1016A:p.L339H,TACC2:NM_206860:exon3:c.T1016A:p.L339H,TACC2:NM_206861:exon6:c.T1220A:p.L407H,TACC2:NM_206862:exon9:c.T6782A:p.L2261H	exonic	ENSG00000138162	NA	nonsynonymous SNV	ENSG00000138162:ENST00000260733:exon3:c.T1016A:p.L339H,ENSG00000138162:ENST00000360561:exon3:c.T1016A:p.L339H,ENSG00000138162:ENST00000368999:exon3:c.T1016A:p.L339H,ENSG00000138162:ENST00000369004:exon3:c.T1016A:p.L339H,ENSG00000138162:ENST00000514539:exon3:c.T1067A:p.L356H,ENSG00000138162:ENST00000358010:exon5:c.T1220A:p.L407H,ENSG00000138162:ENST00000513429:exon6:c.T1220A:p.L407H,ENSG00000138162:ENST00000453444:exon7:c.T6794A:p.L2265H,ENSG00000138162:ENST00000334433:exon8:c.T6782A:p.L2261H,ENSG00000138162:ENST00000515273:exon8:c.T6794A:p.L2265H,ENSG00000138162:ENST00000515603:exon8:c.T6647A:p.L2216H,ENSG00000138162:ENST00000369005:exon9:c.T6782A:p.L2261H	Score=333;Name=lod=30	NA	10q26.13	Score=755;Name=V$NRSF_01	NA	NA	NA	rs2295876	0.08	0.08	0.06	0.0890575	0.0835	0.1151	0.1311	0.0045	0.1524	0.08	0.13	0.11	0.01	0.1197	0.13	0.12	T	1.0	D	0.988	D	0.009	N	0.000	P	1.95	M	4.09	T	-1.091	T	0.001	T	0.406	2.024	12.73	5.0	2.016	3.088	9.291	2.024084	2.024084	0.01	0.12407	0.026555	NA	0.138	NA	15.0060634
201	12	110011230	110011230	C	T	exonic	MMAB	NA	nonsynonymous SNV	MMAB:NM_052845:exon1:c.G56A:p.R19H	exonic	ENSG00000139428	NA	nonsynonymous SNV	ENSG00000139428:ENST00000420167:exon1:c.G56A:p.R19H,ENSG00000139428:ENST00000503497:exon1:c.G56A:p.R19H,ENSG00000139428:ENST00000537496:exon1:c.G56A:p.R19H,ENSG00000139428:ENST00000540016:exon1:c.G56A:p.R19H,ENSG00000139428:ENST00000541763:exon1:c.G56A:p.R19H,ENSG00000139428:ENST00000544051:exon1:c.G56A:p.R19H,ENSG00000139428:ENST00000545712:exon1:c.G56A:p.R19H	Score=300;Name=lod=22	NA	12q24.11	NA	Name=ZEB1_(SC-25388),HEY1,c-Myc,CCNT2,TBP,YY1,NANOG_(SC-33759),Pol2-4H8,Sin3Ak-20,ELF1_(SC-631),Oct-2,TAF1,E2F6_(H-50),ETS1,HMGN3,POU2F2,Pol2(phosphoS2),Pol2,E2F6,YY1_(C-20)	Name=114	NA	rs10774775	0.29	0.29	0.283	0.284944	0.2853	0.1607	0.2939	0.438	0.1994	0.28	0.15	0.31	0.45	0.2902	0.45	.	.	0.989	D	0.556	P	0.034	N	0.000	P	0.895	L	-1.76	D	-1.001	T	0.000	T	0.545	2.368	13.88	3.89	1.351	1.236	11.184	2.368378	2.368378	0.01	0.266938	0.389699	NA	NA	NA	14.9908954
202	2	136409574	136409574	A	C	exonic	R3HDM1	NA	nonsynonymous SNV	R3HDM1:NM_015361:exon17:c.A1895C:p.Q632P	exonic	ENSG00000048991	NA	nonsynonymous SNV	ENSG00000048991:ENST00000329971:exon14:c.A1508C:p.Q503P,ENSG00000048991:ENST00000409478:exon14:c.A1511C:p.Q504P,ENSG00000048991:ENST00000410054:exon14:c.A1730C:p.Q577P,ENSG00000048991:ENST00000264160:exon17:c.A1895C:p.Q632P,ENSG00000048991:ENST00000409606:exon17:c.A1898C:p.Q633P	Score=566;Name=lod=266	NA	2q21.3	NA	NA	NA	NA	rs2305165	0.14	0.14	0.117	0.188498	0.1322	0.1756	0.2291	0.0923	0.3609	0.13	0.15	0.19	0.1	0.139	0.19	0.27	T	0.997	D	0.979	D	0.000	D	0.001	P	2.045	M	0.56	T	-1.145	T	0.001	T	0.355	4.09	21.1	5.42	2.039	7.954	15.113	4.090264	4.090264	0.04	0.082907	0.112347	NA	0.094	NA	14.9792264
202	8	39840234	39840234	A	G	exonic	IDO2	NA	nonsynonymous SNV	IDO2:NM_194294:exon5:c.A418G:p.I140V	exonic	ENSG00000188676	NA	nonsynonymous SNV	ENSG00000188676:ENST00000389060:exon4:c.A379G:p.I127V,ENSG00000188676:ENST00000502986:exon5:c.A418G:p.I140V	Score=407;Name=lod=60	NA	8p11.21	Score=896;Name=V$GATA1_03	NA	NA	NA	rs4736794	0.16	0.16	0.152	0.159744	0.1014	0.3343	0.2118	0.0227	0.1881	0.1	0.36	0.19	0.02	0.1603	0.36	.	.	0.999	D	0.996	D	0.000	D	0.016	P	1.14	L	0.99	T	-0.965	T	0.000	T	0.177	4.057	20.8	5.29	2.009	6.903	11.640	4.056992	4.056992	NA	0.094937	0.030472	NA	0.159	NA	14.9766964
203	17	76121318	76121318	G	A	exonic	TMC6	NA	nonsynonymous SNV	TMC6:NM_001127198:exon6:c.C457T:p.L153F,TMC6:NM_007267:exon6:c.C457T:p.L153F	exonic	ENSG00000141524	NA	nonsynonymous SNV	ENSG00000141524:ENST00000392467:exon5:c.C457T:p.L153F,ENSG00000141524:ENST00000306591:exon6:c.C457T:p.L153F,ENSG00000141524:ENST00000322914:exon6:c.C457T:p.L153F,ENSG00000141524:ENST00000589271:exon6:c.C457T:p.L153F,ENSG00000141524:ENST00000590602:exon6:c.C457T:p.L153F,ENSG00000141524:ENST00000592063:exon6:c.C457T:p.L153F	Score=480;Name=lod=119	NA	17q25.3	NA	NA	Name=15	NA	rs12449858	0.14	0.14	0.128	0.105032	0.0924	0.2063	0.255	0.0083	0.0378	0.09	0.27	0.22	0.01	0.1842	0.27	0.02	D	1.0	D	0.989	D	0.000	U	0.000	P	1.795	L	0.18	T	-1.066	T	0.000	T	0.275	4.113	21.2	3.37	1.580	7.533	12.859	4.112597	4.112597	0.03	0.093874	0.025705	NA	0.101	NA	14.9628594
203	2	220417266	220417266	C	T	exonic	OBSL1	NA	nonsynonymous SNV	OBSL1:NM_015311:exon18:c.G5300A:p.R1767Q	exonic	ENSG00000124006	NA	nonsynonymous SNV	ENSG00000124006:ENST00000373876:exon17:c.G5024A:p.R1675Q,ENSG00000124006:ENST00000404537:exon18:c.G5300A:p.R1767Q	Score=464;Name=lod=103	NA	2q35	Score=864;Name=V$ELK1_02	Name=HA-E2F1,CCNT2,HEY1	Name=136	NA	rs59332477	0.42	0.42	0.394	0.376597	0.4583	0.3819	0.5202	0.3495	0.2219	0.47	0.4	0.46	0.33	0.4683	0.47	0.43	T	1.0	D	0.997	D	.	.	0.000	P	1.27	L	-0.24	T	-0.929	T	0.000	T	0.174	4.252	22.2	4.61	2.390	3.585	14.290	4.252406	4.252406	0.17	0.445586	0.365784	NA	0.37	NA	14.9611474
203	17	45249335	45249335	T	G	exonic	CDC27	NA	nonsynonymous SNV	CDC27:NM_001114091:exon3:c.A199C:p.T67P,CDC27:NM_001256:exon3:c.A199C:p.T67P	exonic	ENSG00000004897	NA	nonsynonymous SNV	ENSG00000004897:ENST00000570818:exon1:c.A79C:p.T27P,ENSG00000004897:ENST00000066544:exon3:c.A199C:p.T67P,ENSG00000004897:ENST00000526866:exon3:c.A199C:p.T67P,ENSG00000004897:ENST00000527547:exon3:c.A199C:p.T67P,ENSG00000004897:ENST00000531206:exon3:c.A199C:p.T67P,ENSG00000004897:ENST00000575483:exon3:c.A199C:p.T67P	Score=690;Name=lod=850	NA	17q21.32	Score=836;Name=V$GR_Q6	Name=BRF2,YY1,c-Jun,STAT2,Nrf1,TBP,ZNF274,TAF1,BDP1,TR4	Name=123	NA	rs76782714	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3761	NA	0.31	T	0.0	B	0.001	B	0.002	N	1.000	D	-0.145	N	-0.81	T	-0.975	T	0.158	T	0.802	1.914	12.36	4.6	0.985	3.185	7.199	1.91376	1.91376	0.17	NA	NA	NA	NA	NA	14.9572334
204	21	34059352	34059352	T	C	exonic	SYNJ1	NA	nonsynonymous SNV	SYNJ1:NM_001160302:exon8:c.A884G:p.K295R,SYNJ1:NM_001160306:exon8:c.A884G:p.K295R,SYNJ1:NM_003895:exon8:c.A1001G:p.K334R,SYNJ1:NM_203446:exon8:c.A1001G:p.K334R	exonic	ENSG00000159082	NA	nonsynonymous SNV	ENSG00000159082:ENST00000322229:exon7:c.A884G:p.K295R,ENSG00000159082:ENST00000357345:exon8:c.A884G:p.K295R,ENSG00000159082:ENST00000382491:exon8:c.A884G:p.K295R,ENSG00000159082:ENST00000382499:exon8:c.A1001G:p.K334R,ENSG00000159082:ENST00000429236:exon8:c.A884G:p.K295R,ENSG00000159082:ENST00000433931:exon8:c.A1001G:p.K334R	Score=643;Name=lod=548	NA	21q22.11	Score=873;Name=V$FOXO3_01	NA	NA	NA	rs2254562	0.29	0.29	0.307	0.304113	0.2873	0.3284	0.2882	0.2988	0.3149	0.29	0.34	0.28	0.25	0.2934	0.34	0.03	D	0.992	D	0.843	P	0.000	D	0.000	P	1.5	L	0.29	T	-1.097	T	0.000	T	0.339	5.106	32	5.85	2.239	7.888	16.239	5.106299	5.106299	0.04	0.297905	0.297045	NA	0.326	NA	14.9547284
204	4	187542755	187542755	T	C	exonic	FAT1	NA	nonsynonymous SNV	FAT1:NM_005245:exon10:c.A4985G:p.N1662S	exonic	ENSG00000083857	NA	nonsynonymous SNV	ENSG00000083857:ENST00000441802:exon10:c.A4985G:p.N1662S	Score=444;Name=lod=85	NA	4q35.2	NA	NA	NA	NA	rs28489116	0.23	0.23	0.213	0.200479	0.1113	0.3849	0.1988	0.2141	0.0849	0.12	0.4	0.21	0.21	0.1517	0.4	0.19	T	0.998	D	0.993	D	0.000	D	0.000	P	2.38	M	0.17	T	-1.037	T	0.000	T	0.054	3.063	16.23	5.19	2.304	7.825	15.510	3.063325	3.063325	0.18	0.118012	0.160648	ID=COSM1131155,COSM1131153;OCCURENCE=1(prostate)	0.225	NA	14.9523214
204	16	334543	334543	C	G	exonic	PDIA2	NA	nonsynonymous SNV	PDIA2:NM_006849:exon2:c.C356G:p.T119R	exonic	ENSG00000185615	NA	nonsynonymous SNV	ENSG00000185615:ENST00000219406:exon2:c.C356G:p.T119R,ENSG00000185615:ENST00000404312:exon2:c.C356G:p.T119R	Score=409;Name=lod=61	NA	16p13.3	NA	NA	NA	NA	rs45614840	0.06	0.06	0.063	0.0479233	0.1421	NA	0.0749	0.0045	0.0399	0.14	NA	0.09	0.01	0.1043	0.14	0	D	1.0	D	0.999	D	0.006	N	0.007	P	3.63	H	3.47	T	-1.050	T	0.001	T	0.569	2.342	13.79	3.17	1.873	1.869	11.246	2.341804	2.341804	0	0.134783	0.025475	NA	0.123	NA	14.9521504
205	1	201009182	201009182	A	G	exonic	CACNA1S	NA	nonsynonymous SNV	CACNA1S:NM_000069:exon44:c.T5399C:p.L1800S	exonic	ENSG00000081248	NA	nonsynonymous SNV	ENSG00000081248:ENST00000367338:exon43:c.T5342C:p.L1781S,ENSG00000081248:ENST00000362061:exon44:c.T5399C:p.L1800S	Score=313;Name=lod=25	NA	1q32.1	NA	NA	NA	NA	rs12139527	0.21	0.21	0.198	0.229233	0.1054	0.1091	0.1023	0.6059	0.0613	0.11	0.11	0.1	0.57	0.1549	0.57	0.02	D	0.999	D	0.994	D	.	.	0.128	P	1.905	M	0.56	T	-0.869	T	0.000	T	0.11	3.696	18.77	4.93	1.851	5.618	8.908	3.695757	3.695757	0	0.130698	0.541307	NA	0.246	NA	14.9423354
205	18	59174759	59174759	C	A	exonic	CDH20	NA	nonsynonymous SNV	CDH20:NM_031891:exon5:c.C983A:p.P328H	exonic	ENSG00000101542	NA	nonsynonymous SNV	ENSG00000101542:ENST00000536675:exon5:c.C983A:p.P328H,ENSG00000101542:ENST00000262717:exon6:c.C983A:p.P328H,ENSG00000101542:ENST00000538374:exon6:c.C983A:p.P328H	Score=454;Name=lod=93	NA	18q21.33	NA	NA	NA	NA	rs1943330	0.08	0.08	0.071	0.0593051	0.1461	0.0317	0.0793	0.0121	0.0481	0.14	0.03	0.09	0.02	0.1036	0.14	0.07	T	0.999	D	0.981	D	0.000	D	0.001	P	2.54	M	0.61	T	-1.047	T	0.004	T	0.447	3.264	16.95	4.89	1.411	3.904	16.427	3.263748	3.263748	0.12	0.14186	0.028143	NA	0.109	NA	14.9417734
205	6	33153528	33153528	C	T	exonic	COL11A2	NA	nonsynonymous SNV	COL11A2:NM_080680:exon6:c.G826A:p.E276K	exonic	ENSG00000204248	NA	nonsynonymous SNV	ENSG00000204248:ENST00000341947:exon6:c.G826A:p.E276K,ENSG00000204248:ENST00000357486:exon6:c.G826A:p.E276K,ENSG00000204248:ENST00000374712:exon6:c.G826A:p.E276K,ENSG00000204248:ENST00000395197:exon6:c.G826A:p.E276K,ENSG00000204248:ENST00000457788:exon6:c.G826A:p.E276K	Score=512;Name=lod=160	NA	6p21.32	Score=788;Name=V$COMP1_01	NA	NA	NA	rs9277934	0.29	0.29	0.306	0.321885	0.2773	0.2421	0.2738	0.3858	0.3978	0.27	0.26	0.22	0.39	0.3037	0.39	0.81	T	0.976	D	0.651	P	0.360	U	0.000	P	0.69	N	-2.32	D	-0.520	T	0.387	T	0.269	1.362	10.48	3.8	2.121	3.916	11.346	1.361885	1.361885	0.58	0.314323	0.367131	NA	0.254	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000039839.1;CLNDSDB=.;CLNDSDBID=.	14.9380104
205	9	138516190	138516190	T	C	exonic	GLT6D1	NA	nonsynonymous SNV	GLT6D1:NM_182974:exon5:c.A584G:p.H195R	exonic	ENSG00000204007	NA	nonsynonymous SNV	ENSG00000204007:ENST00000371763:exon5:c.A584G:p.H195R	Score=259;Name=lod=15	NA	9q34.3	Score=757;Name=V$HEN1_02	NA	NA	NA	rs35762223	0.12	0.12	0.117	0.123403	0.1372	0.1538	0.1369	0.1157	0.0787	0.12	0.13	0.15	0.1	0.1309	0.15	0	D	0.999	D	0.986	D	0.021	N	0.647	P	3.115	M	5.08	T	-1.097	T	0.000	T	0.27	3.126	16.45	2.34	0.719	5.890	7.320	3.125657	3.125657	0.02	0.129216	0.125	ID=COSM150746;OCCURENCE=1(stomach)	0.094	NA	14.9360174
206	7	126542667	126542667	A	T	exonic	GRM8	NA	nonsynonymous SNV	GRM8:NM_000845:exon5:c.T1085A:p.F362Y,GRM8:NM_001127323:exon6:c.T1085A:p.F362Y	exonic	ENSG00000179603	NA	nonsynonymous SNV	ENSG00000179603:ENST00000341617:exon5:c.T1085A:p.F362Y,ENSG00000179603:ENST00000405249:exon5:c.T1085A:p.F362Y,ENSG00000179603:ENST00000444921:exon5:c.T1085A:p.F362Y,ENSG00000179603:ENST00000339582:exon6:c.T1085A:p.F362Y,ENSG00000179603:ENST00000358373:exon6:c.T1085A:p.F362Y,ENSG00000179603:ENST00000472701:exon6:c.T1085A:p.F362Y	Score=676;Name=lod=747	NA	7q31.33	Score=992;Name=V$LYF1_01	NA	NA	NA	rs78124913	0.13	0.13	0.127	0.122604	0.1481	0.2083	0.1369	0.0098	0.1503	0.15	0.21	0.14	0.01	0.1309	0.21	0.38	T	0.75	P	0.473	P	0.000	D	0.000	P	1.1	L	-2.33	D	-1.097	T	0.001	T	0.366	3.135	16.48	4.88	1.827	9.283	13.682	3.135052	3.135052	0.22	0.124186	0.03064	ID=COSM150386;OCCURENCE=1(stomach)	0.065	NA	14.9301474
207	13	42465713	42465713	C	T	exonic	VWA8	NA	nonsynonymous SNV	VWA8:NM_001009814:exon5:c.G494A:p.R165H,VWA8:NM_015058:exon5:c.G494A:p.R165H	exonic	ENSG00000102763	NA	nonsynonymous SNV	ENSG00000102763:ENST00000281496:exon5:c.G494A:p.R165H,ENSG00000102763:ENST00000379310:exon5:c.G494A:p.R165H	Score=544;Name=lod=216	NA	13q14.11	NA	NA	NA	NA	rs9562362	0.22	0.22	0.213	0.202077	0.3171	0.1786	0.2954	0.0151	0.2945	0.33	0.2	0.31	0.02	0.2796	0.33	0	D	0.989	D	0.832	P	0.000	D	0.000	P	3.27	M	0.29	T	-1.158	T	0.000	T	0.492	5.663	36	5.71	2.861	7.536	20.224	5.662997	5.662997	0	0.318256	0.059464	NA	0.232	NA	14.9183774
207	11	4842866	4842866	A	G	exonic	OR51F2	NA	nonsynonymous SNV	OR51F2:NM_001004753:exon1:c.A251G:p.D84G	exonic	ENSG00000176925	NA	nonsynonymous SNV	ENSG00000176925:ENST00000322110:exon1:c.A251G:p.D84G	Score=317;Name=lod=26	NA	11p15.4	NA	NA	NA	NA	rs35003053	0.09	0.09	0.072	0.0605032	0.163	NA	0.1023	0.0371	0.0194	0.16	NA	0.14	0.03	0.1039	0.16	0	D	1.0	D	0.991	D	0.001	U	0.000	P	3.54	H	-0.27	T	-0.812	T	0.005	T	0.291	3.656	18.59	4.43	1.991	5.659	12.924	3.656456	3.656456	0	0.148557	0.060654	NA	0.123	NA	14.9178764
208	20	6759115	6759115	A	T	exonic	BMP2	NA	nonsynonymous SNV	BMP2:NM_001200:exon3:c.A570T:p.R190S	exonic	ENSG00000125845	NA	nonsynonymous SNV	ENSG00000125845:ENST00000378827:exon3:c.A570T:p.R190S	Score=534;Name=lod=198	NA	20p12.3	Score=804;Name=V$ER_Q6	NA	NA	NA	rs235768	0.76	0.76	0.773	0.766773	0.6223	0.8284	0.7291	0.9803	0.59	0.63	0.8	0.69	0.98	0.6743	0.98	0.01	D	0.978	D	0.871	P	0.000	D	0.000	P	2.855	M	-0.45	T	-1.044	T	0.000	T	0.329	2.955	15.85	5.72	2.319	4.861	16.363	2.955336	2.955336	0	0.627674	0.927793	NA	0.674	NA	14.9090594
209	12	55846623	55846623	T	C	exonic	OR6C2	NA	nonsynonymous SNV	OR6C2:NM_054105:exon1:c.T626C:p.L209P	exonic	ENSG00000179695	NA	nonsynonymous SNV	ENSG00000179695:ENST00000322678:exon1:c.T626C:p.L209P	NA	NA	12q13.2	NA	NA	NA	NA	rs11171467	0.1	0.1	0.11	0.091254	0.1571	NA	0.0937	0.1346	0.0573	0.16	NA	0.1	0.14	0.1236	0.16	0	D	0.992	D	0.929	D	0.000	D	1.000	P	3.195	M	0.78	T	-0.891	T	0.002	T	0.467	2.39	13.95	5.42	2.275	2.168	11.079	2.389734	2.389734	0	0.164535	0.132093	NA	0.145	NA	14.8880984
210	12	55715048	55715048	C	T	exonic	OR6C1	NA	nonsynonymous SNV	OR6C1:NM_001005182:exon1:c.C665T:p.T222I	exonic	ENSG00000205330	NA	nonsynonymous SNV	ENSG00000205330:ENST00000379668:exon1:c.C665T:p.T222I	NA	NA	12q13.2	NA	NA	NA	NA	rs7132600	0.12	0.12	0.126	0.107428	0.1571	NA	0.0951	0.1982	0.0532	0.16	NA	0.1	0.2	0.1298	0.2	0	D	0.997	D	0.984	D	0.000	D	1.000	P	3.055	M	8.58	T	-0.600	T	0.000	T	0.204	1.974	12.56	4.62	2.380	3.185	17.244	1.974087	1.974087	0	0.164302	0.201316	NA	0.159	NA	14.8821314
211	9	286491	286491	G	A	exonic	DOCK8	NA	nonsynonymous SNV	DOCK8:NM_203447:exon3:c.G187A:p.D63N	exonic	ENSG00000107099	NA	nonsynonymous SNV	ENSG00000107099:ENST00000453981:exon3:c.G187A:p.D63N	Score=533;Name=lod=196	NA	9p24.3	NA	NA	Name=2	NA	rs3209441	0.07	0.07	0.076	0.0700879	0.165	0.0069	0.0807	0.0091	0.1125	0.16	NA	0.08	0.02	0.1234	0.18	0.07	T	1.0	D	0.992	D	.	.	0.000	P	2.24	M	1.56	T	-1.229	T	0.001	T	0.123	5.384	34	5.47	2.574	9.479	19.343	5.383843	5.383843	0	0.17593	0.031548	NA	0.094	NA	14.8690034
212	3	56628031	56628031	G	A	exonic	CCDC66	NA	nonsynonymous SNV	CCDC66:NM_001012506:exon10:c.G1277A:p.R426Q,CCDC66:NM_001141947:exon10:c.G1379A:p.R460Q	exonic	ENSG00000180376	NA	nonsynonymous SNV	ENSG00000180376:ENST00000422222:exon9:c.G1247A:p.R416Q,ENSG00000180376:ENST00000326595:exon10:c.G1277A:p.R426Q,ENSG00000180376:ENST00000394672:exon10:c.G1379A:p.R460Q,ENSG00000180376:ENST00000436465:exon10:c.G1379A:p.R460Q	Score=587;Name=lod=323	NA	3p14.3	NA	NA	NA	NA	rs7637449	0.28	0.28	0.27	0.215056	0.5388	0.0486	0.2839	0.0741	0.1953	0.56	0.06	0.33	0.09	0.3961	0.56	0.01	D	1.0	D	0.999	D	0.000	D	0.000	P	2.045	M	0.49	T	-0.870	T	0.000	T	0.4	5.038	29.8	5.81	2.739	4.880	17.852	5.038495	5.038495	0.01	0.537326	0.153881	NA	0.319	NA	14.8611074
212	5	176382995	176382995	G	A	exonic	UIMC1	NA	nonsynonymous SNV	UIMC1:NM_001199298:exon8:c.C1304T:p.P435L,UIMC1:NM_016290:exon8:c.C1304T:p.P435L,UIMC1:NM_001199297:exon9:c.C1304T:p.P435L	exonic	ENSG00000087206	NA	nonsynonymous SNV	ENSG00000087206:ENST00000510698:exon6:c.C461T:p.P154L,ENSG00000087206:ENST00000377219:exon8:c.C1304T:p.P435L,ENSG00000087206:ENST00000377227:exon8:c.C1304T:p.P435L,ENSG00000087206:ENST00000506128:exon8:c.C806T:p.P269L,ENSG00000087206:ENST00000511320:exon8:c.C1304T:p.P435L	Score=480;Name=lod=119	NA	5q35.2	NA	NA	Name=42	NA	rs3733876	0.13	0.13	0.121	0.102636	0.1571	0.1944	0.0879	0.0189	0.0757	0.17	0.17	0.1	0.03	0.1425	0.17	0.04	D	1.0	D	0.999	D	0.001	N	0.001	P	1.355	L	2.58	T	-1.162	T	0.000	T	0.219	2.048	12.8	5.53	2.775	2.389	15.188	2.047947	2.047947	0.01	0.173953	0.043577	NA	0.123	NA	14.8597804
212	19	44377669	44377669	G	A	exonic	ZNF404	NA	nonsynonymous SNV	ZNF404:NM_001033719:exon2:c.C688T:p.H230Y	exonic	ENSG00000176222	NA	nonsynonymous SNV	ENSG00000176222:ENST00000324394:exon2:c.C691T:p.H231Y,ENSG00000176222:ENST00000587539:exon3:c.C697T:p.H233Y	Score=435;Name=lod=78	NA	19q13.31	NA	NA	NA	NA	rs12977303	0.43	0.43	0.378	0.389976	0.507	0.5536	0.5692	0.0855	0.3855	0.51	0.57	0.5	0.11	0.4746	0.57	0	D	1.0	D	0.999	D	.	.	0.867	P	3.99	H	-2.17	D	-1.108	T	0.000	T	0.476	2.071	12.88	2.56	1.444	5.111	12.257	2.070859	2.070859	0.02	0.49342	0.139971	NA	0.37	NA	14.8583134
213	1	145281543	145281543	C	T	exonic	NOTCH2NL	NA	nonsynonymous SNV	NOTCH2NL:NM_203458:exon4:c.C473T:p.T158I	exonic	ENSG00000213240,ENSG00000255168	NA	nonsynonymous SNV	ENSG00000213240:ENST00000344859:exon4:c.C473T:p.T158I,ENSG00000213240:ENST00000362074:exon4:c.C473T:p.T158I,ENSG00000255168:ENST00000468030:exon4:c.C473T:p.T158I,ENSG00000213240:ENST00000369340:exon5:c.C473T:p.T158I	Score=641;Name=lod=535	NA	1q21.1	Score=997;Name=V$MYOD_Q6	Name=CTCF,p300,c-Myc,FOXA1_(C-20)	Name=13	NA	rs8002	NA	NA	0.288	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4808	NA	0.06	T	1.0	D	0.996	D	.	.	0.997	N	1.43	L	-3.12	D	-0.067	T	0.699	D	0.205	3.321	17.17	1.87	0.473	0.859	8.586	3.320895	3.320895	0.04	NA	NA	NA	NA	NA	14.8525334
214	17	45234420	45234420	T	G	exonic	CDC27	NA	nonsynonymous SNV	CDC27:NM_001114091:exon7:c.A701C:p.Y234S,CDC27:NM_001256:exon7:c.A701C:p.Y234S	exonic	ENSG00000004897	NA	nonsynonymous SNV	ENSG00000004897:ENST00000446365:exon6:c.A518C:p.Y173S,ENSG00000004897:ENST00000066544:exon7:c.A701C:p.Y234S,ENSG00000004897:ENST00000526866:exon7:c.A701C:p.Y234S,ENSG00000004897:ENST00000527547:exon7:c.A701C:p.Y234S,ENSG00000004897:ENST00000531206:exon7:c.A701C:p.Y234S	Score=731;Name=lod=1246	NA	17q21.32	Score=790;Name=V$GFI1_01	Name=SETDB1,MafK_(ab50322),SUZ12,IRF3,NFKB,TBP,ZNF274,Nrf1,ZZZ3,TAL1_(SC-12984),BRF2,Pol2(b),EBF,HA-E2F1,HDAC2_(SC-6296),GATA-2,YY1,BRF1,STAT1,RXRA,GTF2F1_(RAP-74),CHD2_(N-1250),CTCF,p300,RPC155,ZBTB33,TAF1,CTCFL_(SC-98982),p300_(F-4),TAF7_(SQ-8),TR4,PU.1,Mxi1_(bHLH),BDP1,SMC3_(ab9263)	Name=145	NA	rs78493795	NA	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4898	NA	0.4	T	0.003	B	0.006	B	0.000	D	0.000	P	0.55	N	0.9	T	-0.853	T	0.139	T	0.936	2.265	13.53	5.44	2.066	7.522	13.444	2.264783	2.264783	0.11	NA	NA	NA	NA	NA	14.8435334
214	19	44418680	44418680	G	C	exonic	ZNF45	NA	nonsynonymous SNV	ZNF45:NM_003425:exon10:c.C908G:p.P303R	exonic	ENSG00000124459	NA	nonsynonymous SNV	ENSG00000124459:ENST00000589703:exon4:c.C908G:p.P303R,ENSG00000124459:ENST00000269973:exon10:c.C908G:p.P303R	Score=383;Name=lod=48	NA	19q13.31	NA	Name=SETDB1	NA	NA	rs388685	0.47	0.47	0.43	0.414337	0.5119	0.5486	0.5764	0.174	0.3855	0.51	0.57	0.51	0.25	0.4789	0.57	0.01	D	1.0	D	0.999	D	0.003	N	0.000	P	2.375	M	2.29	T	-0.893	T	0.000	T	0.195	1.86	12.18	3.39	1.915	2.850	14.050	1.86014	1.86014	0.1	0.500698	0.225601	NA	0.413	NA	14.8418354
215	6	136599393	136599393	G	C	exonic	BCLAF1	NA	nonsynonymous SNV	BCLAF1:NM_001077440:exon4:c.C620G:p.S207C,BCLAF1:NM_001077441:exon4:c.C626G:p.S209C,BCLAF1:NM_014739:exon4:c.C626G:p.S209C	exonic	ENSG00000029363	NA	nonsynonymous SNV	ENSG00000029363:ENST00000392348:exon2:c.C620G:p.S207C,ENSG00000029363:ENST00000353331:exon4:c.C620G:p.S207C,ENSG00000029363:ENST00000527536:exon4:c.C626G:p.S209C,ENSG00000029363:ENST00000527613:exon4:c.C626G:p.S209C,ENSG00000029363:ENST00000527759:exon4:c.C620G:p.S207C,ENSG00000029363:ENST00000529826:exon4:c.C626G:p.S209C,ENSG00000029363:ENST00000530429:exon4:c.C620G:p.S207C,ENSG00000029363:ENST00000530767:exon4:c.C626G:p.S209C,ENSG00000029363:ENST00000531224:exon4:c.C626G:p.S209C,ENSG00000029363:ENST00000532384:exon4:c.C626G:p.S209C,ENSG00000029363:ENST00000534269:exon4:c.C620G:p.S207C	Score=810;Name=lod=2601	NA	6q23.3	Score=731;Name=V$PPARG_01	NA	NA	NA	rs6940018	0.53	0.53	0.545	0.498203	0.499	0.5	0.5	0.4985	0.4939	0.52	0.51	0.55	0.55	0.4999	0.55	0.07	T	0.998	D	0.896	P	0.000	D	1.000	D	1.15	L	2.83	T	-1.182	T	0.050	T	0.732	3.217	16.78	5.97	2.834	3.271	15.175	3.21667	3.21667	0.01	NA	NA	NA	0.493	NA	14.8344334
215	1	144866643	144866643	G	A	exonic	PDE4DIP	NA	nonsynonymous SNV	PDE4DIP:NM_001198834:exon34:c.C5599T:p.R1867C,PDE4DIP:NM_014644:exon34:c.C5599T:p.R1867C,PDE4DIP:NM_001198832:exon36:c.C5281T:p.R1761C	exonic	ENSG00000178104	NA	nonsynonymous SNV	ENSG00000178104:ENST00000369354:exon34:c.C5599T:p.R1867C,ENSG00000178104:ENST00000369356:exon34:c.C5599T:p.R1867C,ENSG00000178104:ENST00000313382:exon36:c.C5281T:p.R1761C,ENSG00000178104:ENST00000530740:exon36:c.C5854T:p.R1952C,ENSG00000178104:ENST00000369359:exon37:c.C6007T:p.R2003C	Score=597;Name=lod=357	NA	1q21.1	NA	NA	NA	NA	rs1620560	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	0.01	D	1.0	D	0.995	D	.	.	1.000	D	2.365	M	3.99	T	-1.099	T	0.019	T	0.513	2.135	13.1	2.24	0.330	1.088	6.287	2.13496	2.13496	0.03	NA	NA	NA	0.493	NA	14.8333334
215	1	144916748	144916748	C	G	exonic	PDE4DIP	NA	nonsynonymous SNV	PDE4DIP:NM_001002811:exon9:c.G2096C:p.S699T,PDE4DIP:NM_001002812:exon13:c.G1607C:p.S536T,PDE4DIP:NM_001198834:exon13:c.G1607C:p.S536T,PDE4DIP:NM_014644:exon13:c.G1607C:p.S536T,PDE4DIP:NM_001198832:exon16:c.G1805C:p.S602T	exonic	ENSG00000178104	NA	nonsynonymous SNV	ENSG00000178104:ENST00000313431:exon9:c.G2096C:p.S699T,ENSG00000178104:ENST00000479408:exon9:c.G968C:p.S323T,ENSG00000178104:ENST00000529945:exon9:c.G2096C:p.S699T,ENSG00000178104:ENST00000369349:exon13:c.G1607C:p.S536T,ENSG00000178104:ENST00000369351:exon13:c.G1607C:p.S536T,ENSG00000178104:ENST00000369354:exon13:c.G1607C:p.S536T,ENSG00000178104:ENST00000369356:exon13:c.G1607C:p.S536T,ENSG00000178104:ENST00000313382:exon16:c.G1805C:p.S602T,ENSG00000178104:ENST00000369359:exon16:c.G2018C:p.S673T,ENSG00000178104:ENST00000530740:exon16:c.G2018C:p.S673T	Score=602;Name=lod=374	NA	1q21.1	NA	NA	NA	NA	rs1747930	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	0.06	T	0.998	D	0.991	D	.	.	1.000	D	2.045	M	4.57	T	-0.400	T	0.367	T	0.609	4.583	24.9	5.73	2.886	4.319	17.817	4.583315	4.583315	0.01	NA	NA	NA	0.5	NA	14.8333334
215	16	341206	341206	C	G	exonic	AXIN1	NA	nonsynonymous SNV	AXIN1:NM_003502:exon9:c.G2278C:p.E760Q	exonic	ENSG00000103126	NA	nonsynonymous SNV	ENSG00000103126:ENST00000262320:exon9:c.G2278C:p.E760Q	Score=567;Name=lod=270	NA	16p13.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.39	T	0.501	P	0.086	B	0.000	D	1.000	D	1.39	L	0.19	T	-0.948	T	0.131	T	0.092	1.519	11.03	3.57	1.836	3.574	14.066	1.519165	1.519165	0.43	NA	NA	NA	NA	NA	14.8333334
215	20	17600316	17600316	T	C	exonic	RRBP1	NA	nonsynonymous SNV	RRBP1:NM_004587:exon19:c.A2338G:p.S780G,RRBP1:NM_001042576:exon20:c.A2338G:p.S780G	exonic	ENSG00000125844	NA	nonsynonymous SNV	ENSG00000125844:ENST00000246043:exon17:c.A3637G:p.S1213G,ENSG00000125844:ENST00000455029:exon18:c.A1660G:p.S554G,ENSG00000125844:ENST00000360807:exon19:c.A2338G:p.S780G,ENSG00000125844:ENST00000377813:exon19:c.A3637G:p.S1213G,ENSG00000125844:ENST00000377807:exon20:c.A2338G:p.S780G	NA	NA	20p12.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.11	T	0.989	D	0.889	P	0.000	D	0.999	N	2.19	M	2.04	T	-0.946	T	0.152	T	0.219	2.496	14.31	4.75	1.048	2.772	10.79	2.495797	2.495797	0.01	NA	NA	NA	NA	NA	14.8333334
215	11	119243493	119243493	C	T	exonic	USP2	NA	nonsynonymous SNV	USP2:NM_004205:exon2:c.G698A:p.R233H	exonic	ENSG00000036672	NA	nonsynonymous SNV	ENSG00000036672:ENST00000260187:exon2:c.G698A:p.R233H	Score=309;Name=lod=24	NA	11q23.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00002701	NA	0.07	T	0.998	D	0.743	P	0.049	N	1.000	D	0.345	N	2.14	T	-1.102	T	0.057	T	0.447	2.721	15.06	5.37	2.501	1.679	16.265	2.720804	2.720804	0	NA	NA	NA	NA	NA	14.8333064
215	4	110618781	110618781	C	T	exonic	CASP6	NA	nonsynonymous SNV	CASP6:NM_001226:exon3:c.G227A:p.R76H	exonic	ENSG00000138794	NA	nonsynonymous SNV	ENSG00000138794:ENST00000265164:exon3:c.G227A:p.R76H,ENSG00000138794:ENST00000503684:exon3:c.G173A:p.R58H,ENSG00000138794:ENST00000505486:exon3:c.G227A:p.R76H	Score=358;Name=lod=38	NA	4q25	NA	NA	NA	NA	rs377499378	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00003395	0.0001	0.01	D	0.72	P	0.234	B	0.000	D	1.000	D	1.8	L	1.89	T	-1.063	T	0.068	T	0.547	2.587	14.61	4.3	1.561	1.325	8.445	2.587369	2.587369	0.06	0.000116	0	NA	NA	NA	14.8331835
215	14	64610629	64610629	G	A	exonic	SYNE2	NA	nonsynonymous SNV	SYNE2:NM_015180:exon83:c.G15446A:p.R5149H,SYNE2:NM_182914:exon83:c.G15446A:p.R5149H	exonic	ENSG00000054654	NA	nonsynonymous SNV	ENSG00000054654:ENST00000555612:exon3:c.G332A:p.R111H,ENSG00000054654:ENST00000394768:exon31:c.G4601A:p.R1534H,ENSG00000054654:ENST00000555002:exon34:c.G5348A:p.R1783H,ENSG00000054654:ENST00000554584:exon81:c.G15197A:p.R5066H,ENSG00000054654:ENST00000344113:exon83:c.G15446A:p.R5149H,ENSG00000054654:ENST00000358025:exon83:c.G15446A:p.R5149H,ENSG00000054654:ENST00000357395:exon84:c.G4601A:p.R1534H	Score=561;Name=lod=253	NA	14q23.2	NA	NA	NA	NA	rs142206385	0.0009	0.0009	NA	0.000399361	NA	0.001	NA	0.0008	NA	NA	0.0017	NA	0.002	0.0002	0.002	0.03	D	0.763	P	0.143	B	0.013	N	1.000	D	2.395	M	1.31	T	-0.906	T	0.120	T	0.383	2.792	15.3	4.44	1.240	3.926	7.484	2.791982	2.791982	0	0.000349	0	NA	NA	NA	14.8327844
215	22	19184095	19184095	T	C	exonic	CLTCL1	NA	nonsynonymous SNV	CLTCL1:NM_001835:exon25:c.A3946G:p.M1316V,CLTCL1:NM_007098:exon25:c.A3946G:p.M1316V	exonic	ENSG00000070371	NA	nonsynonymous SNV	ENSG00000070371:ENST00000263200:exon25:c.A3946G:p.M1316V,ENSG00000070371:ENST00000353891:exon25:c.A3946G:p.M1316V,ENSG00000070371:ENST00000427926:exon26:c.A3946G:p.M1316V	Score=614;Name=lod=419	NA	22q11.21	NA	Name=eGFP-NR4A1	NA	NA	rs1061325	0.38	0.38	0.366	0.403554	0.5149	0.3075	0.4568	0.2277	0.5879	0.52	0.29	0.41	0.25	0.4897	0.52	0.14	T	0.975	D	0.994	D	0.000	D	0.000	P	2.295	M	2.55	T	-0.901	T	0.000	T	0.634	3.458	17.71	3.5	1.469	7.144	12.152	3.457621	3.457621	0.04	0.497029	0.261745	NA	0.333	NA	14.8317044
215	1	235324212	235324212	G	A	exonic	RBM34	NA	nonsynonymous SNV	RBM34:NM_001161533:exon2:c.C224T:p.P75L,RBM34:NM_015014:exon2:c.C224T:p.P75L	exonic	ENSG00000188739	NA	nonsynonymous SNV	ENSG00000188739:ENST00000366606:exon2:c.C209T:p.P70L,ENSG00000188739:ENST00000408888:exon2:c.C224T:p.P75L,ENSG00000188739:ENST00000429912:exon2:c.C224T:p.P75L,ENSG00000188739:ENST00000447801:exon2:c.C218T:p.P73L	NA	NA	1q42.3	NA	Name=Sin3Ak-20,Pol2,CHD2_(N-1250)	Name=115	NA	rs184349413	0.0009	0.0009	NA	0.00179712	0.001	NA	0.0086	0.0015	NA	NA	NA	0.01	NA	0.0004	0.01	0.2	T	0.969	D	0.691	P	0.001	N	0.687	N	2.215	M	2.35	T	-1.091	T	0.057	T	0.267	3.959	20.3	3.17	1.287	2.429	8.907	3.959016	3.959016	0.01	0.000364	0.000785	NA	NA	NA	14.8315694
215	13	39262826	39262826	C	G	exonic	FREM2	NA	nonsynonymous SNV	FREM2:NM_207361:exon1:c.C1345G:p.L449V	exonic	ENSG00000150893	NA	nonsynonymous SNV	ENSG00000150893:ENST00000280481:exon1:c.C1345G:p.L449V	Score=496;Name=lod=138	NA	13q13.3	NA	NA	NA	NA	rs190063725	0.0005	0.0005	NA	0.000399361	0.002	NA	NA	NA	NA	0.0013	NA	NA	NA	0.0001	0.0013	0.25	T	0.988	D	0.751	P	0.000	D	1.000	D	0.93	L	1.71	T	-1.141	T	0.087	T	0.77	2.633	14.77	5.6	2.648	2.597	19.623	2.633404	2.633404	0.13	NA	NA	NA	NA	NA	14.8312334
215	10	73544086	73544086	G	A	exonic	CDH23	NA	nonsynonymous SNV	CDH23:NM_022124:exon40:c.G5411A:p.R1804Q	exonic	ENSG00000107736	NA	nonsynonymous SNV	ENSG00000107736:ENST00000224721:exon41:c.G5426A:p.R1809Q	Score=547;Name=lod=223	NA	10q22.1	NA	NA	NA	NA	rs3802711	0.15	0.15	0.14	0.138978	0.1839	0.2401	0.1282	0.0575	0.1063	0.19	0.21	0.11	0.07	0.1548	0.21	0.37	T	1.0	D	0.993	D	0.000	D	0.000	P	1.145	L	.	.	-1.158	T	0.000	T	0.417	5.596	35	5.44	2.556	6.676	18.895	5.596016	5.596016	0.09	0.164461	0.07785	NA	0.087	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000039213.1|RCV000124200.1;CLNDSDB=.|.;CLNDSDBID=.|.	14.8301724
215	1	223285200	223285200	G	A	exonic	TLR5	NA	stopgain	TLR5:NM_003268:exon6:c.C1174T:p.R392X	exonic	ENSG00000187554	NA	stopgain	ENSG00000187554:ENST00000342210:exon4:c.C1174T:p.R392X,ENSG00000187554:ENST00000540964:exon4:c.C1174T:p.R392X,ENSG00000187554:ENST00000366881:exon6:c.C1174T:p.R392X	Score=343;Name=lod=33	NA	1q41	Score=755;Name=V$SEF1_C	NA	NA	NA	rs5744168	0.04	0.04	0.036	0.0503195	0.0606	0.0387	0.0303	0.0227	0.1033	0.06	0.03	0.04	0.03	0.0556	0.06	1	T	.	.	.	.	0.138	N	1.000	D	.	.	.	.	.	.	.	.	.	7.367	39	4.67	1.330	1.885	10.079	7.367396	7.367396	NA	0.054651	0.024058	NA	0.029	CLINSIG=other|pathogenic|pathogenic;CLNDBN=Legionellosis|Systemic_lupus_erythematosus\x2c_resistance_to\x2c_1|Melioidosis\x2c_resistance_to;CLNREVSTAT=single|single|single;CLNACC=RCV000007037.2|RCV000007038.2|RCV000074501.2;CLNDSDB=MedGen:OMIM|MedGen|MedGen;CLNDSDBID=C1837872:608556|C1864265|CN182252	14.829149
215	8	39862881	39862881	C	T	exonic	IDO2	NA	nonsynonymous SNV	IDO2:NM_194294:exon9:c.C742T:p.R248W	exonic	ENSG00000188676	NA	nonsynonymous SNV	ENSG00000188676:ENST00000389060:exon8:c.C703T:p.R235W,ENSG00000188676:ENST00000502986:exon9:c.C742T:p.R248W	Score=598;Name=lod=358	NA	8p11.21	NA	NA	Name=5	NA	rs10109853	0.41	0.41	0.398	0.418131	0.5139	0.2877	0.4582	0.326	0.5501	0.53	0.27	0.46	0.35	0.4843	0.53	.	.	1.0	D	1.0	D	0.000	D	0.003	P	3.69	H	-0.32	T	-0.914	T	0.000	T	0.556	3.901	19.83	6.03	2.861	3.023	15.934	3.900616	3.900616	NA	0.50608	0.357105	NA	0.362	NA	14.8290534
215	7	23383339	23383339	T	C	exonic	IGF2BP3	NA	nonsynonymous SNV	IGF2BP3:NM_006547:exon9:c.A1075G:p.N359D	exonic	ENSG00000136231	NA	nonsynonymous SNV	ENSG00000136231:ENST00000258729:exon9:c.A1075G:p.N359D	Score=630;Name=lod=484	NA	7p15.3	NA	NA	NA	NA	rs150697725	0.0018	0.0018	NA	0.00139776	0.003	0.001	NA	NA	0.0031	0.004	0.0017	NA	NA	0.0016	0.004	0.4	T	0.57	P	0.196	B	0.000	D	1.000	D	2.085	M	2.47	T	-1.107	T	0.051	T	0.36	3.433	17.61	5.64	2.145	6.155	15.862	3.432779	3.432779	0.2	0.001977	0.000227	NA	NA	NA	14.8267564
216	7	76903907	76903907	C	T	exonic	CCDC146	NA	nonsynonymous SNV	CCDC146:NM_020879:exon11:c.C1378T:p.R460C	exonic	ENSG00000135205	NA	nonsynonymous SNV	ENSG00000135205:ENST00000431197:exon10:c.C520T:p.R174C,ENSG00000135205:ENST00000285871:exon11:c.C1378T:p.R460C	NA	NA	7q11.23	Score=824;Name=V$BACH1_01	NA	NA	NA	rs148164233	0.0014	0.0014	0.002	0.00419329	0.003	0.001	NA	NA	0.0174	0.004	NA	NA	NA	0.0037	0.004	0.03	D	0.99	D	0.727	P	0.001	D	0.997	N	1.39	L	1.04	T	-0.903	T	0.169	T	0.553	1.23	9.989	5.71	2.698	4.057	19.430	1.230341	NA	0	0.002558	0.000681	NA	NA	NA	14.8240754
216	6	161491684	161491684	G	T	exonic	MAP3K4	NA	nonsynonymous SNV	MAP3K4:NM_005922:exon4:c.G1752T:p.Q584H,MAP3K4:NM_006724:exon4:c.G1752T:p.Q584H	exonic	ENSG00000085511	NA	nonsynonymous SNV	ENSG00000085511:ENST00000542952:exon2:c.G197T:p.S66I,ENSG00000085511:ENST00000348824:exon4:c.G1752T:p.Q584H,ENSG00000085511:ENST00000366919:exon4:c.G1752T:p.Q584H,ENSG00000085511:ENST00000366920:exon4:c.G1752T:p.Q584H,ENSG00000085511:ENST00000392142:exon4:c.G1752T:p.Q584H,ENSG00000085511:ENST00000544041:exon4:c.G1752T:p.Q584H,ENSG00000085511:ENST00000490904:exon5:c.G1850T:p.S617I	NA	NA	6q26	NA	NA	Name=2	NA	rs34018542	0.0005	0.0005	NA	0.000798722	0.001	NA	0.0029	0.0008	NA	NA	NA	0.0028	NA	0.0029	0.0056	0.04	D	0.974	D	0.646	P	0.000	D	0.749	N	1.59	L	2.22	T	-1.105	T	0.030	T	0.548	1.105	9.51	4.69	1.363	3.268	9.976	1.105499	NA	0.01	0.005581	0.000908	NA	NA	NA	14.8238524
216	9	79323853	79323853	C	T	exonic	PRUNE2	NA	nonsynonymous SNV	PRUNE2:NM_015225:exon8:c.G3337A:p.D1113N	exonic	ENSG00000106772	NA	nonsynonymous SNV	ENSG00000106772:ENST00000376718:exon8:c.G3337A:p.D1113N,ENSG00000106772:ENST00000428286:exon8:c.G2260A:p.D754N	NA	NA	9q21.2	NA	NA	NA	NA	rs200875180	0.0009	0.0009	NA	0.000998403	0.005	NA	NA	NA	NA	0.0026	NA	NA	NA	0.0038	0.0038	0	D	1.0	D	0.829	P	0.000	D	1.000	D	0.975	L	0.31	T	-0.885	T	0.201	T	0.202	2.621	14.72	5.94	2.826	4.165	14.954	2.620639	2.620639	0	0.003769	0.000319	NA	NA	NA	14.8207644
216	19	35790493	35790493	C	T	exonic	MAG	NA	nonsynonymous SNV	MAG:NM_001199216:exon5:c.C377T:p.A126V,MAG:NM_002361:exon5:c.C452T:p.A151V,MAG:NM_080600:exon5:c.C452T:p.A151V	exonic	ENSG00000105695	NA	nonsynonymous SNV	ENSG00000105695:ENST00000600291:exon4:c.C377T:p.A126V,ENSG00000105695:ENST00000361922:exon5:c.C452T:p.A151V,ENSG00000105695:ENST00000392213:exon5:c.C452T:p.A151V,ENSG00000105695:ENST00000537831:exon5:c.C377T:p.A126V,ENSG00000105695:ENST00000595791:exon5:c.C452T:p.A151V	Score=501;Name=lod=145	NA	19q13.12	NA	NA	NA	NA	rs144553163	0.0027	0.0027	NA	0.00239617	0.005	NA	0.0014	0.0008	0.0051	0.01	NA	NA	0.002	0.0044	0.01	1	T	0.98	D	0.79	P	0.000	D	0.919	D	1.245	L	-1.0	T	-0.510	T	0.274	T	0.433	3.859	19.6	4.57	2.361	1.742	14.866	3.858571	3.858571	0.03	0.004302	0.002497	NA	NA	NA	14.8196314
216	12	49498284	49498284	T	G	exonic	LMBR1L	NA	nonsynonymous SNV	LMBR1L:NM_018113:exon5:c.A382C:p.M128L	exonic	ENSG00000139636	NA	nonsynonymous SNV	ENSG00000139636:ENST00000550137:exon3:c.A208C:p.M70L,ENSG00000139636:ENST00000395141:exon4:c.A367C:p.M123L,ENSG00000139636:ENST00000267102:exon5:c.A382C:p.M128L,ENSG00000139636:ENST00000547382:exon5:c.A382C:p.M128L,ENSG00000139636:ENST00000551854:exon5:c.A397C:p.M133L	Score=622;Name=lod=449	NA	12q13.12	NA	NA	NA	NA	rs35343771	0.0018	0.0018	0	0.00159744	0.005	0.001	0.0029	NA	NA	0.004	0.0017	NA	NA	0.0044	0.0048	1	T	0.91	P	0.909	D	0.000	D	1.000	D	0.8	N	2.07	T	-1.118	T	0.068	T	0.789	3.026	16.1	6.07	2.326	8.005	15.611	3.025943	3.025943	0.55	0.004767	0.001589	NA	NA	NA	14.8191664
216	1	226555302	226555302	A	G	exonic	PARP1	NA	nonsynonymous SNV	PARP1:NM_001618:exon17:c.T2285C:p.V762A	exonic	ENSG00000143799	NA	nonsynonymous SNV	ENSG00000143799:ENST00000366794:exon17:c.T2285C:p.V762A	Score=616;Name=lod=424	NA	1q42.12	NA	NA	NA	Score=100;Name=216809_0_+_100	rs1136410	0.24	0.24	0.204	0.196885	0.1541	0.4365	0.3516	0.0371	0.1002	0.17	0.46	0.33	0.05	0.2018	0.46	0.24	T	0.728	P	0.731	P	0.000	D	0.000	P	2.11	M	2.69	T	-0.836	T	0.000	T	0.428	4.06	20.9	5.56	2.122	8.957	15.709	4.059621	4.059621	0.02	0.159419	0.052882	NA	0.196	NA	14.8180144
217	20	45878118	45878118	C	G	exonic	ZMYND8	NA	nonsynonymous SNV	ZMYND8:NM_012408:exon13:c.G1687C:p.V563L,ZMYND8:NM_183047:exon13:c.G1687C:p.V563L,ZMYND8:NM_183048:exon13:c.G1612C:p.V538L	exonic	ENSG00000101040	NA	nonsynonymous SNV	ENSG00000101040:ENST00000446994:exon12:c.G1438C:p.V480L,ENSG00000101040:ENST00000540497:exon12:c.G1471C:p.V491L,ENSG00000101040:ENST00000311275:exon13:c.G1627C:p.V543L,ENSG00000101040:ENST00000352431:exon13:c.G1687C:p.V563L,ENSG00000101040:ENST00000360911:exon13:c.G1612C:p.V538L,ENSG00000101040:ENST00000372023:exon13:c.G1612C:p.V538L,ENSG00000101040:ENST00000458360:exon13:c.G1612C:p.V538L,ENSG00000101040:ENST00000461685:exon13:c.G1687C:p.V563L,ENSG00000101040:ENST00000471951:exon13:c.G1687C:p.V563L,ENSG00000101040:ENST00000536340:exon13:c.G1708C:p.V570L,ENSG00000101040:ENST00000262975:exon14:c.G1627C:p.V543L,ENSG00000101040:ENST00000355972:exon14:c.G1627C:p.V543L,ENSG00000101040:ENST00000396281:exon15:c.G1627C:p.V543L	NA	NA	20q13.12	NA	Name=Pol2(b)	NA	NA	rs77137073	0.01	0.01	0.003	0.00379393	0.0149	NA	0.0043	NA	0.001	0.01	NA	0.01	NA	0.0085	0.013	0.14	T	0.881	P	0.338	B	0.001	D	1.000	N	1.355	L	-1.73	D	-0.158	T	0.515	D	0.536	0.928	8.782	5.7	2.683	3.209	13.083	0.928382	NA	0.01	0.013256	0.003404	ID=COSM221041;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	NA	NA	14.7966774
217	6	35285719	35285719	A	C	exonic	DEF6	NA	nonsynonymous SNV	DEF6:NM_022047:exon6:c.A859C:p.N287H	exonic	ENSG00000023892	NA	nonsynonymous SNV	ENSG00000023892:ENST00000542066:exon5:c.A94C:p.N32H,ENSG00000023892:ENST00000316637:exon6:c.A859C:p.N287H	Score=371;Name=lod=43	NA	6p21.31	NA	Name=CTCF,c-Myc,HA-E2F1	Name=127	NA	rs61734579	0.01	0.01	0.004	0.00479233	0.0189	NA	0.0072	NA	NA	0.02	NA	0.01	NA	0.0088	0.02	0.06	T	0.985	D	0.67	P	0.001	D	1.000	N	0.64	N	2.64	T	-1.102	T	0.033	T	0.078	4.619	25.3	2.83	0.869	1.349	8.701	4.618935	4.618935	0.05	0.00907	0.001816	NA	NA	NA	14.7965634
218	3	148880043	148880043	G	A	exonic	HPS3	NA	nonsynonymous SNV	HPS3:NM_032383:exon12:c.G2215A:p.G739R	exonic	ENSG00000163755	NA	nonsynonymous SNV	ENSG00000163755:ENST00000460822:exon2:c.G343A:p.G115R,ENSG00000163755:ENST00000460120:exon11:c.G1720A:p.G574R,ENSG00000163755:ENST00000296051:exon12:c.G2215A:p.G739R	Score=407;Name=lod=60	NA	3q24	NA	Name=GR	NA	NA	rs78336249	0.01	0.01	0.004	0.00379393	0.0139	NA	0.0072	NA	NA	0.01	NA	0.01	NA	0.0096	0.016	0.05	D	0.457	P	0.244	B	0.000	N	1.000	D	1.445	L	-0.35	T	-0.727	T	0.144	T	0.115	3.701	18.8	5.11	1.542	5.703	15.002	3.701103	3.701103	0.03	0.015698	0.004539	NA	NA	NA	14.7941354
218	1	186050417	186050417	A	G	exonic	HMCN1	NA	nonsynonymous SNV	HMCN1:NM_031935:exon56:c.A8678G:p.E2893G	exonic	ENSG00000143341	NA	nonsynonymous SNV	ENSG00000143341:ENST00000271588:exon56:c.A8678G:p.E2893G,ENSG00000143341:ENST00000367492:exon56:c.A8678G:p.E2893G	Score=385;Name=lod=49	NA	1q31.1	NA	NA	NA	NA	rs10798035	0.59	0.59	0.563	0.582668	0.499	0.5694	0.6311	0.6952	0.4959	0.51	0.6	0.63	0.66	0.5453	0.67	0.1	T	0.999	D	0.996	D	0.000	D	0.000	P	2.24	M	1.54	T	-0.918	T	0.000	T	0.195	4.808	27.2	5.86	2.241	8.904	14.816	4.808057	4.808057	0.02	0.497558	0.667045	ID=COSM424810;OCCURENCE=1(breast)	0.63	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000082286.1;CLNDSDB=.;CLNDSDBID=.	14.7914754
218	12	108012066	108012066	G	A	exonic	BTBD11	NA	nonsynonymous SNV	BTBD11:NM_001017523:exon8:c.G974A:p.S325N,BTBD11:NM_001018072:exon10:c.G2363A:p.S788N	exonic	ENSG00000151136	NA	nonsynonymous SNV	ENSG00000151136:ENST00000357167:exon8:c.G974A:p.S325N,ENSG00000151136:ENST00000280758:exon10:c.G2363A:p.S788N,ENSG00000151136:ENST00000490090:exon10:c.G2363A:p.S788N	Score=760;Name=lod=1629	NA	12q23.3	NA	NA	NA	NA	rs61753394	0.01	0.01	0.011	0.00658946	0.0209	NA	0.0115	NA	0.0041	0.02	NA	0.03	NA	0.0108	0.03	0.74	T	0.979	D	0.798	P	0.000	D	1.000	D	0.175	N	1.36	T	-1.095	T	0.041	T	0.091	3.926	19.97	5.07	2.509	9.813	18.808	3.925728	3.925728	0.58	0.015581	0.001589	NA	0.007	NA	14.7860524
219	6	46593224	46593224	A	G	exonic	CYP39A1	NA	nonsynonymous SNV	CYP39A1:NM_016593:exon7:c.T862C:p.Y288H	exonic	ENSG00000146233	NA	nonsynonymous SNV	ENSG00000146233:ENST00000275016:exon7:c.T862C:p.Y288H	NA	NA	6p12.3	Score=839;Name=V$OCT1_01	NA	NA	NA	rs17856332	0.01	0.01	0.006	0.00738818	0.0249	NA	0.0115	0.0023	0.001	0.03	NA	0.02	0.0041	0.0124	0.03	0.71	T	0.97	D	0.827	P	0.000	D	1.000	N	0.97	L	-1.96	D	-0.597	T	0.380	T	0.177	2.167	13.2	5.2	1.970	4.960	11.458	2.166504	2.166504	0.1	0.01907	0.00522	NA	NA	NA	14.7769634
219	1	17265507	17265507	C	T	exonic	CROCC	NA	nonsynonymous SNV	CROCC:NM_014675:exon12:c.C1478T:p.P493L	exonic	ENSG00000058453	NA	nonsynonymous SNV	ENSG00000058453:ENST00000375541:exon12:c.C1478T:p.P493L	Score=383;Name=lod=48	NA	1p36.13	NA	NA	Name=9	NA	rs201951425	0.02	0.02	0.016	NA	NA	NA	NA	NA	NA	0.03	NA	0.02	0.02	0.027	0.03	0.31	T	0.995	D	0.852	P	.	.	1.000	D	1.735	L	2.78	T	-1.193	T	0.021	T	0.169	2.848	15.49	5.39	2.702	5.113	14.606	2.847709	2.847709	0.07	0.02968	0.012881	ID=COSM424609;OCCURENCE=1(breast)	0.014	NA	14.7766534
220	19	15918802	15918802	C	G	exonic	OR10H1	NA	nonsynonymous SNV	OR10H1:NM_013940:exon1:c.G46C:p.G16R	exonic	ENSG00000186723	NA	nonsynonymous SNV	ENSG00000186723:ENST00000334920:exon1:c.G46C:p.G16R	Score=278;Name=lod=18	NA	19p13.12	NA	NA	NA	NA	rs4808383	0.15	0.15	0.134	0.152955	0.1779	0.12	0.1124	0.1331	0.2168	0.18	0.13	0.1	0.13	0.1874	0.2	0.01	D	1.0	D	0.97	D	0.000	D	0.270	P	3.475	M	5.94	T	-1.045	T	0.000	T	0.333	2.106	13	2.28	0.323	1.939	6.958	2.105991	2.105991	0.01	0.197093	0.138901	NA	0.239	NA	14.7709404
220	6	116943975	116943975	G	A	exonic	RSPH4A	NA	nonsynonymous SNV	RSPH4A:NM_001010892:exon2:c.G731A:p.R244H,RSPH4A:NM_001161664:exon2:c.G731A:p.R244H	exonic	ENSG00000111834	NA	nonsynonymous SNV	ENSG00000111834:ENST00000229554:exon2:c.G731A:p.R244H,ENSG00000111834:ENST00000368580:exon2:c.G731A:p.R244H,ENSG00000111834:ENST00000368581:exon2:c.G731A:p.R244H	Score=652;Name=lod=594	NA	6q22.1	NA	NA	NA	NA	rs41289942	0.01	0.01	0.013	0.0119808	0.0249	0.001	0.0216	NA	0.0194	0.03	NA	0.02	NA	0.0196	0.03	0.09	T	0.868	P	0.427	B	0.000	D	1.000	D	3.075	M	2.09	T	-1.040	T	0.064	T	0.596	3.293	17.06	4.8	2.661	1.835	13.533	3.292948	3.292948	0	0.023256	0.004312	NA	0.007	NA	14.7655774
221	12	9312951	9312951	G	A	exonic	PZP	NA	nonsynonymous SNV	PZP:NM_002864:exon24:c.C3008T:p.T1003M	exonic	ENSG00000126838	NA	nonsynonymous SNV	ENSG00000126838:ENST00000381997:exon19:c.C2366T:p.T789M,ENSG00000126838:ENST00000261336:exon24:c.C3008T:p.T1003M	Score=358;Name=lod=38	NA	12p13.31	NA	NA	NA	NA	rs57006764	0.26	0.26	0.246	0.270767	0.1909	0.4762	0.2695	0.1619	0.2894	0.17	0.44	0.25	0.21	0.2101	0.44	0	D	1.0	D	0.996	D	0.000	U	0.983	P	3.11	M	1.04	T	-0.968	T	0.000	T	0.13	1.514	11.01	3.67	1.044	2.458	8.644	1.5143	1.5143	0	0.169302	0.161144	NA	0.167	NA	14.7630314
221	1	25291010	25291010	A	T	exonic	RUNX3	NA	nonsynonymous SNV	RUNX3:NM_001031680:exon1:c.T53A:p.I18N	exonic	ENSG00000020633	NA	nonsynonymous SNV	ENSG00000020633:ENST00000399916:exon1:c.T53A:p.I18N,ENSG00000020633:ENST00000338888:exon2:c.T53A:p.I18N	Score=509;Name=lod=156	NA	1p36.11	NA	Name=Pol2,Pol2-4H8	NA	NA	rs6672420	0.55	0.55	0.527	0.577676	0.5209	0.6885	0.719	0.3873	0.6789	0.49	0.66	0.66	0.4	0.5703	0.66	0.01	D	1.0	D	0.994	D	0.414	N	0.000	P	0.69	N	-4.2	D	-0.903	T	0.000	T	0.11	1.947	12.47	5.67	2.163	5.452	12.316	1.947479	1.947479	0	0.483953	0.423706	NA	0.384	NA	14.7581804
221	11	6007899	6007899	C	T	exonic	OR52L1	NA	nonsynonymous SNV	OR52L1:NM_001005173:exon1:c.G262A:p.D88N	exonic	ENSG00000183313	NA	nonsynonymous SNV	ENSG00000183313:ENST00000332249:exon1:c.G262A:p.D88N	Score=486;Name=lod=126	NA	11p15.4	NA	NA	NA	NA	rs4501959	0.19	0.19	0.17	0.167332	0.1879	0.3264	0.2954	0.0121	0.1012	0.19	0.31	0.25	0.02	0.1968	0.31	0.01	D	1.0	D	0.99	D	0.001	N	0.015	P	3.19	M	-0.2	T	-1.111	T	0.000	T	0.063	3.795	19.27	2.7	1.747	1.845	9.429	3.795375	3.795375	0.01	0.192689	0.043664	NA	0.065	NA	14.7559444
222	11	7949707	7949707	A	G	exonic	OR10A6	NA	nonsynonymous SNV	OR10A6:NM_001004461:exon1:c.T503C:p.F168S	exonic	ENSG00000175393	NA	nonsynonymous SNV	ENSG00000175393:ENST00000309838:exon1:c.T503C:p.F168S	Score=346;Name=lod=34	NA	11p15.4	NA	NA	NA	NA	rs111488559	0.02	0.02	0.013	0.0183706	0.0258	NA	0.0648	0.0015	0.0194	0.02	NA	0.04	0.0041	0.0343	0.04	0	D	0.981	D	0.832	P	0.000	D	0.932	N	3.505	H	8.58	T	-1.038	T	0.001	T	0.316	1.828	12.07	3.24	0.792	1.052	7.024	1.828003	1.828003	0	0.039348	0.009768	NA	0.007	NA	14.7338854
222	17	40714804	40714804	C	A	exonic	COASY	NA	nonsynonymous SNV	COASY:NM_025233:exon1:c.C164A:p.S55Y,COASY:NM_001042529:exon2:c.C164A:p.S55Y,COASY:NM_001042532:exon3:c.C251A:p.S84Y	exonic	ENSG00000068120	NA	nonsynonymous SNV	ENSG00000068120:ENST00000393818:exon1:c.C164A:p.S55Y,ENSG00000068120:ENST00000420359:exon2:c.C164A:p.S55Y,ENSG00000068120:ENST00000421097:exon2:c.C164A:p.S55Y,ENSG00000068120:ENST00000585811:exon2:c.C164A:p.S55Y,ENSG00000068120:ENST00000585909:exon2:c.C251A:p.S84Y,ENSG00000068120:ENST00000586771:exon2:c.C164A:p.S55Y,ENSG00000068120:ENST00000587214:exon2:c.C164A:p.S55Y,ENSG00000068120:ENST00000587858:exon3:c.C251A:p.S84Y,ENSG00000068120:ENST00000590958:exon3:c.C251A:p.S84Y	Score=483;Name=lod=122	NA	17q21.2	NA	Name=Pol2,CEBPB	Name=41	NA	rs615942	0.47	0.47	0.435	0.506989	0.5239	0.4524	0.487	0.4289	0.6656	0.53	0.45	0.44	0.45	0.539	0.58	0.01	D	0.944	P	0.66	P	0.001	D	0.000	P	0.695	N	1.45	T	-0.903	T	0.000	T	0.309	3.845	19.53	5.69	2.693	5.153	17.298	3.845183	3.845183	0.04	0.542927	0.43094	ID=COSM1383389;OCCURENCE=1(large_intestine)	0.601	NA	14.7275064
223	1	94512565	94512565	C	T	exonic	ABCA4	NA	nonsynonymous SNV	ABCA4:NM_000350:exon19:c.G2828A:p.R943Q	exonic	ENSG00000198691	NA	nonsynonymous SNV	ENSG00000198691:ENST00000535735:exon18:c.G2606A:p.R869Q,ENSG00000198691:ENST00000370225:exon19:c.G2828A:p.R943Q	Score=366;Name=lod=41	NA	1p22.1	Score=882;Name=V$AP4_01	NA	NA	NA	rs1801581	0.01	0.01	0.014	0.0153754	0.0368	NA	0.0086	0.0023	0.0317	0.04	NA	0.01	0.002	0.0307	0.041	0.16	T	0.519	P	0.163	B	0.003	N	1.000	N	0.855	L	-2.81	D	-0.481	T	0.429	T	0.366	1.513	11.01	3.54	1.294	1.065	7.555	1.512669	1.512669	0.35	0.041047	0.014299	NA	0.072	CLINSIG=other|pathogenic|non-pathogenic;CLNDBN=MACULAR_DEGENERATION\x2c_AGE-RELATED\x2c_2\x2c_SUSCEPTIBILITY_TO|Stargardt_disease_1|not_provided;CLNREVSTAT=single|single|single;CLNACC=RCV000008374.1|RCV000008375.1|RCV000085512.2;CLNDSDB=.|MedGen:OMIM:Orphanet|.;CLNDSDBID=.|C1855465:248200:ORPHA827|.	14.7247864
223	19	39915758	39915758	C	G	exonic	PLEKHG2	NA	nonsynonymous SNV	PLEKHG2:NM_022835:exon19:c.C3985G:p.P1329A	exonic	ENSG00000090924	NA	nonsynonymous SNV	ENSG00000090924:ENST00000425673:exon17:c.C3898G:p.P1300A,ENSG00000090924:ENST00000409794:exon19:c.C3985G:p.P1329A	Score=409;Name=lod=61	NA	19q13.2	NA	Name=Pol2	NA	NA	rs31728	0.56	0.56	0.555	0.592252	0.5338	0.6002	0.5058	0.677	0.591	0.53	0.55	0.51	0.65	0.5527	0.68	.	.	0.999	D	0.991	D	0.001	D	0.000	P	2.015	M	-1.23	T	-0.846	T	0.000	T	0.252	2.899	15.66	3.03	2.481	1.115	9.195	2.898814	2.898814	0.02	0.5298	0.6787	NA	0.478	NA	14.7170334
224	1	19600406	19600406	C	T	ncRNA_exonic	AKR7L	NA	NA	NA	exonic	ENSG00000211454	NA	unknown	UNKNOWN	Score=482;Name=lod=121	NA	1p36.13	NA	NA	NA	NA	rs149246656	0.01	0.01	0.007	0.0195687	0.0348	NA	0.0317	0.0008	0.0409	0.02	NA	0.04	NA	0.0431	0.041	0.02	D	1.0	D	1.0	D	0.000	D	1.000	D	.	.	.	.	-0.441	T	0.152	T	0.535	3.906	19.86	3.15	1.772	4.619	13.301	3.906027	3.906027	NA	0.040541	0.006522	NA	NA	NA	14.7148923
225	22	37581422	37581422	G	C	exonic	C1QTNF6	NA	nonsynonymous SNV	C1QTNF6:NM_031910:exon2:c.C125G:p.P42R,C1QTNF6:NM_182486:exon2:c.C125G:p.P42R	exonic	ENSG00000133466	NA	nonsynonymous SNV	ENSG00000133466:ENST00000337843:exon2:c.C125G:p.P42R,ENSG00000133466:ENST00000397110:exon2:c.C125G:p.P42R,ENSG00000133466:ENST00000434784:exon2:c.C125G:p.P42R	Score=358;Name=lod=38	Name=Hypothyroidism	22q12.3	NA	NA	NA	NA	rs229526	0.18	0.18	0.173	0.189097	0.2068	0.1071	0.1369	0.2769	0.1738	0.19	0.1	0.16	0.28	0.1999	0.28	0.13	T	0.919	P	0.483	P	0.001	D	0.000	P	2.24	M	1.08	T	-1.056	T	0.000	T	0.298	1.557	11.16	4.49	2.039	3.883	15.369	1.557493	1.557493	0.11	0.22314	0.26532	NA	0.196	NA	14.7034934
225	4	93511396	93511396	C	T	exonic	GRID2	NA	nonsynonymous SNV	GRID2:NM_001510:exon2:c.C203T:p.T68M	exonic	ENSG00000152208	NA	nonsynonymous SNV	ENSG00000152208:ENST00000282020:exon2:c.C203T:p.T68M,ENSG00000152208:ENST00000510992:exon2:c.C203T:p.T68M	Score=534;Name=lod=197	NA	4q22.1	NA	NA	NA	NA	rs34144324	0.03	0.03	0.027	0.0227636	0.0447	0.002	0.0533	0.0121	0.0143	0.05	0.0017	0.06	0.01	0.0351	0.06	0	D	0.963	D	0.595	P	0.000	D	0.528	N	0	N	2.38	T	-0.717	T	0.075	T	0.222	3.828	19.44	5.96	2.826	5.085	15.948	3.828449	3.828449	0.02	0.050581	0.020881	ID=COSM1130995;OCCURENCE=1(prostate)	0.029	NA	14.7029524
225	9	104385711	104385711	C	T	exonic	GRIN3A	NA	nonsynonymous SNV	GRIN3A:NM_133445:exon5:c.G2503A:p.D835N	exonic	ENSG00000198785	NA	nonsynonymous SNV	ENSG00000198785:ENST00000361820:exon5:c.G2503A:p.D835N	Score=660;Name=lod=640	NA	9q31.1	Score=926;Name=V$HSF2_01	NA	NA	NA	rs10989563	0.11	0.11	0.126	0.131589	0.2386	0.0466	0.1671	0.0703	0.1667	0.19	0.04	0.17	0.05	0.2034	0.19	0.34	T	0.999	D	0.977	D	0.000	D	0.000	P	1.79	L	1.69	T	-1.211	T	0.000	T	0.051	4.921	28.4	5.72	2.716	7.818	19.894	4.92116	4.92116	0.23	0.191744	0.089877	NA	NA	NA	14.6995894
225	7	89938680	89938680	C	T	exonic	C7orf63	NA	nonsynonymous SNV	C7orf63:NM_001039706:exon22:c.C2654T:p.T885M,C7orf63:NM_001160138:exon22:c.C2600T:p.T867M	exonic	ENSG00000105792	NA	nonsynonymous SNV	ENSG00000105792:ENST00000449577:exon10:c.C1265T:p.T422M,ENSG00000105792:ENST00000316089:exon21:c.C2516T:p.T839M,ENSG00000105792:ENST00000389297:exon22:c.C2654T:p.T885M,ENSG00000105792:ENST00000497910:exon22:c.C2600T:p.T867M	Score=474;Name=lod=113	NA	7q21.13	NA	NA	NA	NA	rs1134956	0.38	0.38	0.365	0.380591	0.5577	0.2024	0.3991	0.2859	0.4969	0.57	0.18	0.41	0.29	0.5071	0.57	0.01	D	1.0	D	1.0	D	0.000	D	0.000	P	2.395	M	1.55	T	-0.886	T	0.000	T	0.522	4.164	21.5	5.51	2.601	4.335	19.421	4.163953	4.163953	0.01	0.571902	0.346494	NA	0.449	NA	14.6966314
226	17	39643340	39643340	T	G	exonic	KRT36	NA	nonsynonymous SNV	KRT36:NM_003771:exon6:c.A1070C:p.N357T	exonic	ENSG00000126337	NA	nonsynonymous SNV	ENSG00000126337:ENST00000328119:exon6:c.A1070C:p.N357T,ENSG00000126337:ENST00000393986:exon7:c.A920C:p.N307T	NA	NA	17q21.2	Score=765;Name=V$HTF_01	Name=TCF12,CTCF,Rad21	Name=29	NA	rs11657323	0.15	0.15	0.15	0.142173	0.2316	0.004	0.1239	0.1755	0.1605	0.24	0.0017	0.14	0.19	0.1923	0.24	0.02	D	0.286	B	0.395	B	0.000	D	1.000	P	2.015	M	-2.43	D	-0.986	T	0.001	T	0.078	2.491	14.29	3.84	0.520	-0.770	5.603	2.491425	2.491425	0.02	0.216395	0.169542	NA	0.196	NA	14.6930384
226	4	75248505	75248505	G	T	exonic	EREG	NA	nonsynonymous SNV	EREG:NM_001432:exon4:c.G422T:p.C141F	exonic	ENSG00000124882	NA	nonsynonymous SNV	ENSG00000124882:ENST00000244869:exon4:c.G422T:p.C141F	Score=441;Name=lod=83	NA	4q13.3	Score=874;Name=V$TAL1ALPHAE47_01	NA	NA	NA	rs78803121	0.02	0.02	0.024	0.0181709	0.0527	NA	0.0202	0.0008	0.0235	0.05	NA	0.03	0.002	0.0369	0.055	0.46	T	0.85	P	0.424	B	0.005	N	0.895	D	2.165	M	2.61	T	-1.050	T	0.007	T	0.277	2	12.64	3.84	1.436	0.953	7.992	1.99957	1.99957	0.16	0.054884	0.013845	NA	0.007	NA	14.6888494
226	4	48037926	48037926	A	G	exonic	NIPAL1	NA	nonsynonymous SNV	NIPAL1:NM_207330:exon6:c.A970G:p.I324V	exonic	ENSG00000163293	NA	nonsynonymous SNV	ENSG00000163293:ENST00000295461:exon6:c.A970G:p.I324V	Score=514;Name=lod=163	NA	4p12	Score=766;Name=V$YY1_02	NA	NA	NA	rs13116684	0.21	0.21	0.196	0.204073	0.2187	0.1637	0.1916	0.2262	0.2096	0.21	0.19	0.2	0.24	0.2097	0.28	.	.	0.994	D	0.974	D	0.000	N	0.014	P	2.255	M	-3.11	D	-1.183	T	0.001	T	0.066	2.24	13.45	2.24	0.168	6.085	12.221	2.240068	2.240068	0.06	0.217093	0.203813	NA	0.239	NA	14.6878404
226	22	30888494	30888494	C	T	exonic	SEC14L4	NA	nonsynonymous SNV	SEC14L4:NM_001161368:exon8:c.G631A:p.E211K,SEC14L4:NM_174977:exon8:c.G631A:p.E211K	exonic	ENSG00000133488	NA	nonsynonymous SNV	ENSG00000133488:ENST00000255858:exon8:c.G631A:p.E211K,ENSG00000133488:ENST00000381982:exon8:c.G631A:p.E211K,ENSG00000133488:ENST00000392772:exon8:c.G469A:p.E157K,ENSG00000133488:ENST00000540456:exon9:c.G586A:p.E196K	Score=569;Name=lod=275	NA	22q12.2	NA	NA	NA	NA	rs17738527	0.15	0.15	0.132	0.14397	0.2296	0.0397	0.281	0.0923	0.136	0.22	0.04	0.23	0.11	0.1928	0.23	0.06	T	0.992	D	0.917	D	0.000	D	0.000	P	2.445	M	1.6	T	-1.202	T	0.000	T	0.513	5.495	35	5.09	2.527	5.662	17.602	5.495305	5.495305	0	0.225116	0.113482	NA	0.058	NA	14.6858174
227	3	132226100	132226100	A	G	exonic	DNAJC13	NA	nonsynonymous SNV	DNAJC13:NM_015268:exon43:c.A5018G:p.Y1673C	exonic	ENSG00000138246	NA	nonsynonymous SNV	ENSG00000138246:ENST00000260818:exon43:c.A5018G:p.Y1673C	Score=663;Name=lod=662	NA	3q22.1	NA	NA	NA	NA	rs79953286	0.03	0.03	0.033	0.0241613	0.0586	NA	0.0461	0.0023	0.0276	0.07	NA	0.04	0.01	0.0447	0.07	0.06	T	0.992	D	0.62	P	0.000	D	1.000	D	1.15	L	2.21	T	-1.201	T	0.005	T	0.327	2.156	13.17	5.75	2.181	5.344	16.050	2.15641	2.15641	0.16	0.060349	0.013618	NA	0.036	NA	14.6696844
227	2	108875198	108875198	G	A	exonic	SULT1C3	NA	nonsynonymous SNV	SULT1C3:NM_001008743:exon5:c.G535A:p.G179R	exonic	ENSG00000196228	NA	nonsynonymous SNV	ENSG00000196228:ENST00000329106:exon5:c.G535A:p.G179R,ENSG00000196228:ENST00000376700:exon5:c.G535A:p.G179R	Score=460;Name=lod=99	NA	2q12.3	NA	NA	NA	NA	rs2219078	0.39	0.39	0.384	0.34984	0.1918	0.6766	0.3876	0.3064	0.2076	0.21	0.73	0.37	0.3	0.2803	0.73	0	D	1.0	D	1.0	D	0.002	N	0.000	P	4.02	H	-2.23	D	-0.903	T	0.000	T	0.393	2.156	13.17	2.21	0.617	5.240	9.208	2.156047	2.156047	0	0.193023	0.293917	NA	0.275	NA	14.6682104
228	14	81251255	81251255	T	C	exonic	CEP128	NA	nonsynonymous SNV	CEP128:NM_152446:exon14:c.A2195G:p.H732R	exonic	ENSG00000100629	NA	nonsynonymous SNV	ENSG00000100629:ENST00000281129:exon14:c.A2195G:p.H732R,ENSG00000100629:ENST00000555265:exon15:c.A2195G:p.H732R	Score=358;Name=lod=38	NA	14q31.1	NA	Name=CTCF	Name=59	NA	rs327463	0.29	0.29	0.289	0.332268	0.3827	0.1806	0.3602	0.2383	0.544	0.38	0.19	0.35	0.23	0.3854	0.4	0.49	T	0.996	D	0.89	P	0.001	D	0.000	P	1.5	L	1.55	T	-0.913	T	0.000	T	0.286	1.638	11.43	4.88	2.326	2.088	12.780	1.637792	1.637792	0.36	0.40407	0.268271	ID=COSM147825;OCCURENCE=1(stomach)	0.377	NA	14.6611634
229	1	113098534	113098534	C	T	exonic	ST7L	NA	nonsynonymous SNV	ST7L:NM_017744:exon12:c.G1352A:p.R451Q,ST7L:NM_138727:exon12:c.G1301A:p.R434Q,ST7L:NM_138728:exon12:c.G1352A:p.R451Q,ST7L:NM_138729:exon12:c.G1352A:p.R451Q	exonic	ENSG00000007341	NA	nonsynonymous SNV	ENSG00000007341:ENST00000544629:exon10:c.G1157A:p.R386Q,ENSG00000007341:ENST00000369669:exon11:c.G803A:p.R268Q,ENSG00000007341:ENST00000343210:exon12:c.G1352A:p.R451Q,ENSG00000007341:ENST00000358039:exon12:c.G1352A:p.R451Q,ENSG00000007341:ENST00000360743:exon12:c.G1352A:p.R451Q,ENSG00000007341:ENST00000361846:exon12:c.G1352A:p.R451Q,ENSG00000007341:ENST00000369666:exon12:c.G1301A:p.R434Q,ENSG00000007341:ENST00000369668:exon12:c.G1352A:p.R451Q,ENSG00000007341:ENST00000490067:exon12:c.G1301A:p.R434Q,ENSG00000007341:ENST00000538187:exon12:c.G1184A:p.R395Q,ENSG00000007341:ENST00000490715:exon13:c.G1352A:p.R451Q	Score=718;Name=lod=1107	NA	1p13.2	NA	NA	NA	Score=73;Name=123186_0_-_73	rs6658555	0.16	0.16	0.152	0.1248	0.2406	0.0893	0.1196	0.093	0.089	0.26	0.07	0.15	0.11	0.1931	0.26	0.14	T	1.0	D	0.998	D	0.000	D	0.000	P	1.765	L	2.05	T	-1.128	T	0.093	T	0.791	5.171	32	5.59	2.625	6.086	19.188	5.171196	5.171196	0.13	0.248721	0.118021	ID=COSM146584;OCCURENCE=1(stomach)	0.101	NA	14.6509124
229	6	42977092	42977092	T	C	exonic	PPP2R5D	NA	synonymous SNV	PPP2R5D:NM_180977:exon10:c.T966C:p.N322N,PPP2R5D:NM_001270476:exon12:c.T831C:p.N277N,PPP2R5D:NM_006245:exon12:c.T1284C:p.N428N,PPP2R5D:NM_180976:exon12:c.T1188C:p.N396N	exonic	ENSG00000112640	NA	synonymous SNV	ENSG00000112640:ENST00000461010:exon10:c.T966C:p.N322N,ENSG00000112640:ENST00000394110:exon12:c.T1188C:p.N396N,ENSG00000112640:ENST00000472118:exon12:c.T1260C:p.N420N,ENSG00000112640:ENST00000485511:exon12:c.T1284C:p.N428N	Score=606;Name=lod=386	NA	6p21.1	Score=909;Name=V$SOX9_B1	Name=CTCF,Rad21,CTCF_(C-20),SMC3_(ab9263),CTCF_(SC-5916),ZNF263,CTCFL_(SC-98982)	Name=87	NA	rs114970216	0.0023	0.0023	0	0.00119808	0.005	NA	0.0014	NA	NA	0.01	NA	0.0028	NA	0.0048	0.011	.	.	.	.	.	.	.	.	1.000	D	.	.	.	.	.	.	.	.	.	0.714	7.805	-6.84	-1.363	-1.143	18.214	0.714379	NA	NA	0.007209	0.002724	NA	0.014	NA	14.6496576
230	21	42852497	42852497	C	T	exonic	TMPRSS2	NA	nonsynonymous SNV	TMPRSS2:NM_001135099:exon6:c.G589A:p.V197M,TMPRSS2:NM_005656:exon6:c.G478A:p.V160M	exonic	ENSG00000184012	NA	nonsynonymous SNV	ENSG00000184012:ENST00000424093:exon5:c.G358A:p.V120M,ENSG00000184012:ENST00000332149:exon6:c.G478A:p.V160M,ENSG00000184012:ENST00000398585:exon6:c.G589A:p.V197M,ENSG00000184012:ENST00000458356:exon6:c.G478A:p.V160M,ENSG00000184012:ENST00000454499:exon7:c.G478A:p.V160M	Score=466;Name=lod=104	NA	21q22.3	NA	NA	NA	NA	rs12329760	0.29	0.29	0.302	0.261382	0.2356	0.3621	0.1542	0.2867	0.226	0.25	0.4	0.19	0.29	0.2502	0.4	0.02	D	0.999	D	0.938	D	0.022	N	0.077	P	2.755	M	-0.75	T	-1.061	T	0.000	T	0.274	3.616	18.4	4.23	2.392	1.578	9.916	3.615593	3.615593	0.03	0.216279	0.290286	ID=COSM149228;OCCURENCE=1(stomach)	0.21	NA	14.6312544
230	7	34874038	34874038	C	G	exonic	NPSR1	NA	nonsynonymous SNV	NPSR1:NM_207172:exon6:c.C723G:p.S241R,NPSR1:NM_207173:exon6:c.C723G:p.S241R	exonic	ENSG00000187258	NA	nonsynonymous SNV	ENSG00000187258:ENST00000381542:exon4:c.C525G:p.S175R,ENSG00000187258:ENST00000359791:exon6:c.C723G:p.S241R,ENSG00000187258:ENST00000360581:exon6:c.C723G:p.S241R,ENSG00000187258:ENST00000381539:exon6:c.C723G:p.S241R,ENSG00000187258:ENST00000531252:exon6:c.C690G:p.S230R	Score=497;Name=lod=139	NA	7p14.3	Score=863;Name=V$IRF1_01	NA	NA	NA	rs727162	0.28	0.28	0.265	0.317692	0.2177	0.3512	0.3516	0.2708	0.4254	0.22	0.33	0.32	0.3	0.2777	0.33	0.15	T	0.999	D	0.974	D	0.000	D	0.000	P	1.755	L	1.22	T	-0.996	T	0.000	T	0.381	2.111	13.02	4.75	2.456	1.415	10.144	2.111304	2.111304	0.07	0.210698	0.26759	NA	0.254	NA	14.6272354
231	15	43256191	43256191	T	C	exonic	UBR1	NA	nonsynonymous SNV	UBR1:NM_174916:exon42:c.A4642G:p.T1548A	exonic	ENSG00000159459	NA	nonsynonymous SNV	ENSG00000159459:ENST00000290650:exon42:c.A4642G:p.T1548A	Score=516;Name=lod=166	NA	15q15.2	Score=799;Name=V$FREAC3_01	NA	NA	NA	rs3917223	0.03	0.03	0.04	0.033147	0.0736	0.001	0.0259	0.0023	0.0716	0.08	0.0017	0.03	NA	0.0638	0.08	0.3	T	0.702	P	0.217	B	0.000	D	1.000	D	0.995	L	0.8	T	-1.153	T	0.006	T	0.084	2.472	14.23	4.65	1.969	3.860	12.458	2.472063	2.472063	0.21	0.073505	0.016568	NA	0.036	NA	14.6224284
231	11	116633862	116633862	G	A	exonic	BUD13	NA	nonsynonymous SNV	BUD13:NM_001159736:exon4:c.C443T:p.P148L,BUD13:NM_032725:exon4:c.C443T:p.P148L	exonic	ENSG00000137656	NA	nonsynonymous SNV	ENSG00000137656:ENST00000260210:exon4:c.C443T:p.P148L,ENSG00000137656:ENST00000375445:exon4:c.C443T:p.P148L	Score=265;Name=lod=16	Name=Metabolic syndrome (bivariate traits)	11q23.3	NA	NA	NA	NA	rs11820589	0.08	0.08	0.066	0.0888578	0.0696	NA	0.134	0.1808	0.044	0.06	NA	0.1	0.18	0.0787	0.18	0	D	0.733	P	0.229	B	0.002	N	0.000	P	2.31	M	2.15	T	-1.061	T	0.000	T	0.046	1.347	10.42	4.08	2.597	4.403	12.959	1.346601	1.346601	0.01	0.068219	0.164698	NA	0.072	NA	14.6168144
231	11	43940602	43940602	C	G	exonic	ALKBH3	NA	nonsynonymous SNV	ALKBH3:NM_139178:exon9:c.C684G:p.D228E	exonic	ENSG00000166199	NA	nonsynonymous SNV	ENSG00000166199:ENST00000302708:exon9:c.C684G:p.D228E	Score=477;Name=lod=116	NA	11p11.2	NA	NA	NA	NA	rs1130290	0.16	0.16	0.15	0.138978	0.2575	0.0933	0.1398	0.0802	0.1431	0.26	0.08	0.15	0.1	0.1985	0.26	0.01	D	0.898	P	0.779	P	0.000	D	0.000	P	2.085	M	2.58	T	-1.210	T	0.000	T	0.221	4.659	25.6	5.91	2.793	2.591	15.799	4.658695	4.658695	0	0.261047	0.097821	ID=COSM1127789;OCCURENCE=1(prostate)	0.145	NA	14.6162864
231	1	27239920	27239920	C	G	exonic	NR0B2	NA	nonsynonymous SNV	NR0B2:NM_021969:exon1:c.G512C:p.G171A	exonic	ENSG00000131910	NA	nonsynonymous SNV	ENSG00000131910:ENST00000254227:exon1:c.G512C:p.G171A	Score=580;Name=lod=304	NA	1p36.11	NA	NA	NA	NA	rs6659176	0.05	0.05	0.042	0.0465256	0.0746	0.006	0.049	0.0552	0.046	0.07	0.01	0.06	0.05	0.0615	0.081	0.61	T	0.991	D	0.894	P	0.000	D	1.000	D	0.965	L	-3.43	D	-0.331	T	0.189	T	0.24	4.021	20.6	3.43	0.588	3.826	11.346	4.020611	4.020611	0.02	0.081279	0.061734	NA	0.043	NA	14.6159544
232	22	30762140	30762140	G	A	exonic	CCDC157	NA	nonsynonymous SNV	CCDC157:NM_001017437:exon3:c.G151A:p.D51N	exonic	ENSG00000187860	NA	nonsynonymous SNV	ENSG00000187860:ENST00000445005:exon2:c.G151A:p.D51N,ENSG00000187860:ENST00000338306:exon3:c.G151A:p.D51N,ENSG00000187860:ENST00000399824:exon3:c.G151A:p.D51N,ENSG00000187860:ENST00000405659:exon3:c.G151A:p.D51N,ENSG00000187860:ENST00000430839:exon3:c.G151A:p.D51N	Score=540;Name=lod=208	NA	22q12.2	Score=909;Name=V$RORA1_01	NA	NA	NA	rs740223	0.17	0.17	0.184	0.159145	0.2694	0.1468	0.1571	0.1415	0.0838	0.24	0.12	0.16	0.14	0.1961	0.26	0.15	T	1.0	D	1.0	D	.	.	0.000	P	1.905	M	1.46	T	-1.212	T	0.000	T	0.301	5.589	35	5.25	2.613	9.060	17.382	5.588928	5.588928	0.04	0.256279	0.151384	NA	0.275	NA	14.6115544
232	11	59189912	59189912	G	A	exonic	OR5A2	NA	nonsynonymous SNV	OR5A2:NM_001001954:exon1:c.C515T:p.P172L	exonic	ENSG00000172324	NA	nonsynonymous SNV	ENSG00000172324:ENST00000302040:exon1:c.C515T:p.P172L	Score=346;Name=lod=34	NA	11q12.1	NA	NA	NA	NA	rs1453547	0.16	0.16	0.153	0.125998	0.2515	0.1121	0.1311	0.0242	0.1452	0.26	0.12	0.16	0.04	0.209	0.26	0.01	D	0.997	D	0.993	D	0.004	U	0.259	P	2.45	M	8.76	T	-0.551	T	0.000	T	0.201	3.866	19.64	4.55	1.428	3.157	13.889	3.86568	3.86568	0.02	0.262864	0.058155	NA	0.109	NA	14.6099694
232	11	59224608	59224608	A	G	exonic	OR4D6	NA	nonsynonymous SNV	OR4D6:NM_001004708:exon1:c.A175G:p.M59V	exonic	ENSG00000166884	NA	nonsynonymous SNV	ENSG00000166884:ENST00000300127:exon1:c.A175G:p.M59V	Score=410;Name=lod=62	NA	11q12.1	NA	NA	NA	NA	rs1453544	0.16	0.16	0.16	0.1252	0.2525	0.1141	0.1326	0.0197	0.1431	0.27	0.12	0.16	0.04	0.2092	0.27	0	D	0.939	P	0.76	P	0.000	D	0.403	P	3.205	M	2.99	T	-1.061	T	0.000	T	0.242	2.193	13.29	4.88	1.088	7.516	11.149	2.19261	2.19261	0	0.263562	0.055429	ID=COSM1178424;OCCURENCE=1(prostate)	0.094	NA	14.6080714
233	1	55273580	55273580	G	T	exonic	C1orf177	NA	nonsynonymous SNV	C1orf177:NM_001110533:exon4:c.G376T:p.G126C,C1orf177:NM_152607:exon4:c.G376T:p.G126C	exonic	ENSG00000162398	NA	nonsynonymous SNV	ENSG00000162398:ENST00000358193:exon4:c.G376T:p.G126C,ENSG00000162398:ENST00000371273:exon4:c.G376T:p.G126C	Score=403;Name=lod=58	NA	1p32.3	NA	NA	NA	NA	rs9782980	0.48	0.48	0.497	0.498003	0.5905	0.2708	0.4568	0.5023	0.6605	0.59	0.28	0.48	0.52	0.5604	0.6	0	D	1.0	D	0.999	D	0.000	D	0.000	P	2.135	M	1.76	T	-0.903	T	0.000	T	0.395	2.589	14.62	4.45	2.531	3.474	9.007	2.589442	2.589442	0	0.598256	0.509532	NA	0.565	NA	14.5841774
234	1	205814485	205814485	G	A	exonic	PM20D1	NA	nonsynonymous SNV	PM20D1:NM_152491:exon3:c.C457T:p.R153W	exonic	ENSG00000162877	NA	nonsynonymous SNV	ENSG00000162877:ENST00000367136:exon3:c.C457T:p.R153W	Score=514;Name=lod=164	NA	1q32.1	NA	NA	NA	NA	rs1104899	0.23	0.23	0.221	0.2498	0.2515	0.255	0.2536	0.1868	0.3252	0.25	0.23	0.21	0.21	0.2634	0.25	0.01	D	0.996	D	0.962	D	0.000	D	0.000	P	3.38	M	0.06	T	-1.022	T	0.000	T	0.367	2.027	12.74	3.96	0.793	2.648	5.217	2.027395	2.027395	0.02	0.249419	0.203132	NA	0.188	NA	14.5690144
234	6	29523952	29523952	A	G	exonic	UBD	NA	nonsynonymous SNV	UBD:NM_006398:exon2:c.T203C:p.I68T	exonic	ENSG00000213886	NA	nonsynonymous SNV	ENSG00000213886:ENST00000377050:exon2:c.T203C:p.I68T	Score=251;Name=lod=14	NA	6p22.1	NA	NA	NA	NA	rs2076485	0.17	0.17	0.154	0.18151	0.2495	0.1756	0.2089	0.0295	0.3037	0.26	0.17	0.19	0.03	0.2536	0.26	0	D	1.0	D	0.99	D	0.727	N	0.003	P	3.14	M	-1.39	T	-0.189	T	0.597	D	0.168	3.017	16.06	3.0	0.352	1.033	7.034	3.016838	3.016838	0.02	0.262643	0.067836	ID=COSM1442903;OCCURENCE=1(large_intestine)	0.123	NA	14.5675904
235	17	649547	649547	G	C	exonic	GEMIN4	NA	nonsynonymous SNV	GEMIN4:NM_015721:exon2:c.C1736G:p.A579G	exonic	ENSG00000179409	NA	nonsynonymous SNV	ENSG00000179409:ENST00000576778:exon1:c.C1703G:p.A568G,ENSG00000179409:ENST00000319004:exon2:c.C1736G:p.A579G	Score=409;Name=lod=61	NA	17p13.3	NA	NA	NA	NA	rs910925	0.69	0.69	0.71	0.710064	0.5885	0.7232	0.6412	0.8858	0.6329	0.59	0.71	0.61	0.88	0.6244	0.88	0.03	D	1.0	D	0.997	D	0.000	D	0.000	P	2.095	M	2.35	T	-1.080	T	0.000	T	0.581	4.442	23.7	5.84	2.779	9.633	19.135	4.442024	4.442024	0.1	0.56253	0.832337	NA	0.565	NA	14.5579034
236	15	74560776	74560776	G	T	exonic	CCDC33	NA	nonsynonymous SNV	CCDC33:NM_025055:exon5:c.G523T:p.G175C	exonic	ENSG00000140481	NA	nonsynonymous SNV	ENSG00000140481:ENST00000398814:exon5:c.G523T:p.G175C,ENSG00000140481:ENST00000321288:exon7:c.G1132T:p.G378C	NA	NA	15q24.1	Score=731;Name=V$LUN1_01	NA	NA	NA	rs56107695	0.07	0.07	0.075	0.0820687	0.0845	0.0774	0.1297	0.0113	0.1462	0.08	0.07	0.14	0.02	0.0969	0.14	0.01	D	0.967	D	0.876	P	0.016	N	1.000	P	2.075	M	2.1	T	-1.079	T	0.001	T	0.428	1.208	9.905	3.78	0.978	2.465	9.166	1.207964	NA	0.01	0.099398	0.021156	NA	0.036	NA	14.5525354
237	18	33848581	33848581	T	C	exonic	MOCOS	NA	nonsynonymous SNV	MOCOS:NM_017947:exon15:c.T2600C:p.V867A	exonic	ENSG00000075643	NA	nonsynonymous SNV	ENSG00000075643:ENST00000261326:exon15:c.T2600C:p.V867A	Score=466;Name=lod=104	NA	18q12.2	Score=845;Name=V$ELK1_01	NA	NA	NA	rs1057251	0.08	0.08	0.053	0.072484	0.0775	0.0704	0.1758	0.0378	0.0429	0.07	0.07	0.17	0.03	0.0977	0.17	0.03	D	0.835	P	0.144	B	0.052	N	0.961	P	2.175	M	2.41	T	-1.035	T	0.000	T	0.228	2.756	15.18	5.74	2.323	4.257	12.760	2.755988	2.755988	0	0.116279	0.04562	NA	0.051	NA	14.5418544
237	19	18304700	18304700	A	G	exonic	MPV17L2	NA	nonsynonymous SNV	MPV17L2:NM_032683:exon2:c.A214G:p.M72V	exonic	ENSG00000254858	NA	nonsynonymous SNV	ENSG00000254858:ENST00000534474:exon2:c.A214G:p.M72V,ENSG00000254858:ENST00000599612:exon2:c.A214G:p.M72V	Score=552;Name=lod=234	Name=Multiple sclerosis	19p13.11	NA	NA	Name=22	NA	rs874628	0.19	0.19	0.194	0.17472	0.2813	0.0655	0.1974	0.1967	0.1319	0.28	0.07	0.22	0.19	0.2345	0.28	1	T	0.799	P	0.587	P	0.000	D	0.062	P	0.82	L	0.97	T	-0.903	T	0.000	T	0.244	2.239	13.44	4.45	1.758	2.477	9.802	2.238933	2.238933	0.02	0.275755	0.190313	NA	0.225	NA	14.5417784
238	11	5364450	5364450	A	G	exonic	OR51B5	NA	nonsynonymous SNV	OR51B5:NM_001005567:exon5:c.T305C:p.I102T	exonic	ENSG00000242180	NA	nonsynonymous SNV	ENSG00000242180:ENST00000300773:exon1:c.T305C:p.I102T	Score=259;Name=lod=15	NA	11p15.4	NA	NA	NA	NA	rs11036912	0.33	0.33	0.298	0.325679	0.4404	0.1796	0.4035	0.2595	0.3926	0.44	0.16	0.42	0.27	0.4139	0.45	0	D	0.991	D	0.881	P	0.000	D	0.000	P	2.78	M	3.99	T	-0.910	T	0.000	T	0.256	3.514	17.95	4.76	2.017	2.296	13.295	3.513868	3.513868	0	0.447172	0.279191	NA	0.362	NA	14.5318614
239	11	77301341	77301341	G	A	exonic	AQP11	NA	nonsynonymous SNV	AQP11:NM_173039:exon1:c.G304A:p.G102S	exonic	ENSG00000178301	NA	nonsynonymous SNV	ENSG00000178301:ENST00000313578:exon1:c.G304A:p.G102S	Score=482;Name=lod=121	NA	11q14.1	Score=822;Name=V$PAX3_01	NA	Name=60	NA	rs2276415	0.14	0.14	0.131	0.145966	0.0964	0.1825	0.1902	0.1377	0.1391	0.09	0.2	0.16	0.15	0.1357	0.21	0.32	T	0.952	P	0.334	B	0.000	N	0.000	P	1.955	M	-1.92	D	-1.077	T	0.001	T	0.103	3.402	17.49	3.68	0.715	2.719	9.864	3.402396	3.402396	0.02	0.093313	0.135	NA	0.159	NA	14.5079204
239	3	164793758	164793758	C	A	exonic	SI	NA	nonsynonymous SNV	SI:NM_001041:exon2:c.G43T:p.V15F	exonic	ENSG00000090402	NA	nonsynonymous SNV	ENSG00000090402:ENST00000264382:exon2:c.G43T:p.V15F,ENSG00000090402:ENST00000476593:exon2:c.G43T:p.V15F	Score=361;Name=lod=39	NA	3q26.1	NA	NA	NA	NA	rs9290264	0.21	0.21	0.203	0.199481	0.2753	0.1111	0.1787	0.2118	0.2106	0.28	0.11	0.22	0.23	0.2551	0.3	0.07	T	0.955	P	0.649	P	0.001	D	0.012	P	2.19	M	-2.84	D	-1.400	T	0.000	T	0.636	2.742	15.13	5.68	2.702	2.195	15.296	2.742371	2.742371	0.01	0.296857	0.214934	NA	0.159	NA	14.5060764
240	1	145075683	145075683	C	T	exonic	PDE4DIP	NA	stopgain	PDE4DIP:NM_022359:exon1:c.G180A:p.W60X	exonic	ENSG00000178104	NA	stopgain	ENSG00000178104:ENST00000369345:exon1:c.G180A:p.W60X,ENSG00000178104:ENST00000369348:exon1:c.G180A:p.W60X,ENSG00000178104:ENST00000369359:exon1:c.G180A:p.W60X,ENSG00000178104:ENST00000526359:exon1:c.G180A:p.W60X,ENSG00000178104:ENST00000528661:exon1:c.G180A:p.W60X,ENSG00000178104:ENST00000530740:exon1:c.G180A:p.W60X	Score=329;Name=lod=29	NA	1q21.1	NA	Name=TBP,ZNF274,SUZ12,CCNT2,CtBP2,Pol2,TAF1	Name=117	NA	rs2762779	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.51	0.49	0.4999	0.51	1	T	.	.	.	.	.	.	1.000	A	.	.	.	.	.	.	.	.	.	4.419	23.5	3.72	2.068	2.191	11.187	4.418607	4.418607	0	NA	NA	ID=COSM423677;OCCURENCE=1(breast)	0.442	NA	14.5001
240	1	144852390	144852390	C	T	exonic	PDE4DIP	NA	stopgain	PDE4DIP:NM_001198834:exon44:c.G7053A:p.W2351X	exonic	ENSG00000178104	NA	stopgain	ENSG00000178104:ENST00000369356:exon44:c.G7053A:p.W2351X	Score=289;Name=lod=20	NA	1q21.1	Score=948;Name=V$P53_02	Name=CTCF	NA	NA	rs2455986	NA	NA	0.449	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	0.21	1	T	.	.	.	.	.	.	1.000	D	.	.	.	.	.	.	.	.	.	15.108	49	3.48	2.216	2.282	10.259	15.107742	15.107742	NA	NA	NA	NA	0.181	NA	14.5
240	11	48347014	48347014	G	A	exonic	OR4C3	NA	stopgain	OR4C3:NM_001004702:exon1:c.G522A:p.W174X	exonic	ENSG00000176547	NA	stopgain	ENSG00000176547:ENST00000319856:exon1:c.G522A:p.W174X	Score=313;Name=lod=25	NA	11p11.2	Score=817;Name=V$RREB1_01	NA	NA	NA	rs72473368	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	1	T	.	.	.	.	0.000	D	1.000	D	.	.	.	.	.	.	.	.	.	4.667	25.7	5.78	2.782	1.461	17.680	4.667316	4.667316	0	NA	NA	NA	0.486	NA	14.5
241	1	237841390	237841390	A	G	exonic	RYR2	NA	nonsynonymous SNV	RYR2:NM_001035:exon61:c.A8873G:p.Q2958R	exonic	ENSG00000198626	NA	nonsynonymous SNV	ENSG00000198626:ENST00000542537:exon60:c.A8825G:p.Q2942R,ENSG00000198626:ENST00000366574:exon61:c.A8873G:p.Q2958R,ENSG00000198626:ENST00000360064:exon62:c.A8867G:p.Q2956R	Score=609;Name=lod=398	NA	1q43	NA	Name=p300_(N-15),CTCF,Rad21,CTCF_(SC-5916),SMC3_(ab9263)	Name=81	NA	rs34967813	0.14	0.14	0.123	0.0992412	0.2942	NA	0.1988	0.0113	0.0491	0.3	NA	0.21	0.02	0.2533	0.3	0.42	T	0.287	B	0.032	B	0.000	D	0.000	P	1.16	L	-0.29	T	-1.093	T	0.000	T	0.538	3.368	17.35	5.67	2.164	7.168	10.287	3.367905	3.367905	0.38	0.304163	0.052618	NA	0.13	CLINSIG=probable-non-pathogenic|non-pathogenic|non-pathogenic;CLNDBN=Cardiomyopathy|not_specified|not_provided;CLNREVSTAT=single|mult|single;CLNACC=RCV000030429.1|RCV000036801.2|RCV000127843.1;CLNDSDB=MedGen:SNOMED_CT|.|.;CLNDSDBID=C0878544:85898001|.|.	14.4816704
241	19	15990431	15990431	C	T	exonic	CYP4F2	NA	nonsynonymous SNV	CYP4F2:NM_001082:exon11:c.G1297A:p.V433M	exonic	ENSG00000186115	NA	nonsynonymous SNV	ENSG00000186115:ENST00000221700:exon11:c.G1297A:p.V433M,ENSG00000186115:ENST00000592328:exon11:c.G1297A:p.V433M	Score=503;Name=lod=147	Name=Vitamin E levels,Acenocoumarol maintenance dosage,Warfarin maintenance dose,Response to Vitamin E supplementation,Metabolite levels	19p13.12	NA	Name=ZNF263	NA	NA	rs2108622	0.22	0.22	0.207	0.236821	0.2903	0.2143	0.2378	0.0825	0.4131	0.27	0.21	0.28	0.09	0.2726	0.29	0.01	D	1.0	D	0.98	D	0.000	U	0.000	P	3.08	M	-0.51	T	-1.120	T	0.000	T	0.18	2.408	14.01	1.72	0.476	1.995	7.54	2.407803	2.407803	0.01	0.291163	0.09714	NA	0.152	NA	14.4792704
241	22	39134207	39134207	C	T	exonic	SUN2	NA	nonsynonymous SNV	SUN2:NM_001199579:exon17:c.G2074A:p.G692S,SUN2:NM_015374:exon17:c.G2011A:p.G671S,SUN2:NM_001199580:exon18:c.G2011A:p.G671S	exonic	ENSG00000100242	NA	nonsynonymous SNV	ENSG00000100242:ENST00000455125:exon4:c.G430A:p.G144S,ENSG00000100242:ENST00000216064:exon17:c.G2011A:p.G671S,ENSG00000100242:ENST00000405018:exon17:c.G2074A:p.G692S,ENSG00000100242:ENST00000411587:exon17:c.G1978A:p.G660S,ENSG00000100242:ENST00000405510:exon18:c.G2011A:p.G671S,ENSG00000100242:ENST00000406622:exon18:c.G2011A:p.G671S	Score=437;Name=lod=80	NA	22q13.1	NA	Name=ZNF263,Pol2-4H8	NA	NA	rs2072797	0.11	0.11	0.098	0.0950479	0.1312	0.1677	0.0519	0.0068	0.1329	0.14	0.19	0.07	0.01	0.1093	0.19	0.1	T	0.969	D	0.86	P	0.002	N	0.000	P	2.335	M	0.93	T	-1.196	T	0.001	T	0.481	4.574	24.8	4.89	2.284	5.529	17.754	4.573738	4.573738	0	0.113605	0.021335	ID=COSM149297;OCCURENCE=1(stomach)	0.087	NA	14.4792284
241	6	152772264	152772264	A	G	exonic	SYNE1	NA	nonsynonymous SNV	SYNE1:NM_033071:exon26:c.T3125C:p.V1042A,SYNE1:NM_182961:exon26:c.T3104C:p.V1035A	exonic	ENSG00000131018	NA	nonsynonymous SNV	ENSG00000131018:ENST00000367253:exon24:c.T3104C:p.V1035A,ENSG00000131018:ENST00000413186:exon24:c.T3104C:p.V1035A,ENSG00000131018:ENST00000367248:exon25:c.T3074C:p.V1025A,ENSG00000131018:ENST00000265368:exon26:c.T3104C:p.V1035A,ENSG00000131018:ENST00000367255:exon26:c.T3104C:p.V1035A,ENSG00000131018:ENST00000423061:exon26:c.T3125C:p.V1042A,ENSG00000131018:ENST00000448038:exon27:c.T3125C:p.V1042A,ENSG00000131018:ENST00000341594:exon29:c.T3302C:p.V1101A	Score=391;Name=lod=52	NA	6q25.2	NA	NA	NA	NA	rs214976	0.59	0.59	0.621	0.607228	0.4473	0.749	0.3732	0.8086	0.5194	0.44	0.74	0.4	0.77	0.4811	0.77	0.06	T	0.481	P	0.164	B	0.325	N	0.000	P	1.955	M	0.63	T	0.108	D	0.536	D	0.276	3.746	19.02	5.84	2.367	8.644	16.560	3.745785	3.745785	0.01	0.429535	0.733545	NA	0.587	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118478.2;CLNDSDB=.;CLNDSDBID=.	14.4753984
242	11	34969112	34969112	A	G	exonic	PDHX	NA	nonsynonymous SNV	PDHX:NM_001135024:exon3:c.A256G:p.T86A,PDHX:NM_001166158:exon3:c.A301G:p.T101A,PDHX:NM_003477:exon3:c.A301G:p.T101A	exonic	ENSG00000110435	NA	nonsynonymous SNV	ENSG00000110435:ENST00000533262:exon2:c.A220G:p.T74A,ENSG00000110435:ENST00000227868:exon3:c.A301G:p.T101A,ENSG00000110435:ENST00000430469:exon3:c.A301G:p.T101A,ENSG00000110435:ENST00000448838:exon3:c.A256G:p.T86A,ENSG00000110435:ENST00000533550:exon3:c.A121G:p.T41A	Score=500;Name=lod=143	NA	11p13	Score=830;Name=V$FREAC4_01	NA	NA	NA	rs11539202	0.15	0.15	0.162	0.108826	0.3191	NA	0.1527	0.0257	0.0859	0.33	NA	0.16	0.03	0.2197	0.33	0.33	T	0.999	D	0.996	D	0.000	D	0.000	P	-0.135	N	2.0	T	-0.914	T	0.000	T	0.696	3.228	16.82	4.93	1.091	8.129	11.872	3.228063	3.228063	0.12	0.321545	0.086512	NA	0.094	NA	14.4729884
242	9	92003679	92003679	C	T	exonic	SEMA4D	NA	nonsynonymous SNV	SEMA4D:NM_001142287:exon13:c.G979A:p.A327T,SEMA4D:NM_006378:exon13:c.G979A:p.A327T	exonic	ENSG00000187764	NA	nonsynonymous SNV	ENSG00000187764:ENST00000339861:exon11:c.G979A:p.A327T,ENSG00000187764:ENST00000422704:exon11:c.G979A:p.A327T,ENSG00000187764:ENST00000450295:exon11:c.G979A:p.A327T,ENSG00000187764:ENST00000356444:exon12:c.G979A:p.A327T,ENSG00000187764:ENST00000420987:exon12:c.G979A:p.A327T,ENSG00000187764:ENST00000429836:exon12:c.G979A:p.A327T,ENSG00000187764:ENST00000455551:exon12:c.G979A:p.A327T,ENSG00000187764:ENST00000343780:exon13:c.G979A:p.A327T,ENSG00000187764:ENST00000438547:exon13:c.G979A:p.A327T,ENSG00000187764:ENST00000537934:exon13:c.G979A:p.A327T	Score=450;Name=lod=90	NA	9q22.2	NA	NA	NA	NA	rs11526468	0.26	0.26	0.233	0.22524	0.3072	0.3294	0.2723	0.0174	0.2812	0.31	0.38	0.3	0.03	0.2715	0.38	0.15	T	1.0	D	0.98	D	0.000	D	0.000	P	3.595	H	2.52	T	-0.985	T	0.000	T	0.554	4.679	25.8	4.03	1.250	5.521	14.473	4.67851	4.67851	0.11	0.28907	0.063096	NA	0.246	NA	14.4655634
243	8	1514009	1514009	C	A	exonic	DLGAP2	NA	nonsynonymous SNV	DLGAP2:NM_001277161:exon3:c.C1151A:p.P384Q,DLGAP2:NM_004745:exon3:c.C1151A:p.P384Q	exonic	ENSG00000198010	NA	nonsynonymous SNV	ENSG00000198010:ENST00000421627:exon3:c.C1151A:p.P384Q	Score=278;Name=lod=18	NA	8p23.3	Score=828;Name=V$AP4_01	NA	NA	NA	rs2301963	0.44	0.44	0.384	0.460663	0.4503	0.4484	0.5749	0.3434	0.5613	0.43	0.45	0.55	0.35	0.4943	0.55	0.03	D	0.976	D	0.636	P	0.003	N	0.561	P	2.2	M	1.98	T	-0.891	T	0.000	T	0.184	2.695	14.97	4.55	2.238	3.412	17.716	2.69538	2.69538	0.1	0.447405	0.373023	NA	0.486	NA	14.4413284
244	22	42912097	42912097	C	T	exonic	RRP7A	NA	nonsynonymous SNV	RRP7A:NM_015703:exon3:c.G262A:p.V88I	exonic	ENSG00000189306	NA	nonsynonymous SNV	ENSG00000189306:ENST00000323013:exon3:c.G262A:p.V88I	Score=295;Name=lod=21	NA	22q13.2	NA	Name=TCF4	Name=6	NA	rs11553441	0.09	0.09	0.064	0.0760783	0.1461	0.003	0.1772	0.0567	0.0337	0.14	0.0017	0.2	0.05	0.1271	0.2	0.12	T	0.941	P	0.373	B	0.000	D	0.000	P	2	M	2.21	T	-1.004	T	0.000	T	0.133	1.212	9.919	2.9	0.946	3.845	12.115	1.211667	NA	0	0.137442	0.077621	NA	0.167	NA	14.4226914
245	1	248224216	248224216	C	T	exonic	OR2L3	NA	nonsynonymous SNV	OR2L3:NM_001004687:exon1:c.C233T:p.P78L	exonic	ENSG00000198128	NA	nonsynonymous SNV	ENSG00000198128:ENST00000359959:exon1:c.C233T:p.P78L	Score=278;Name=lod=18	NA	1q44	NA	NA	NA	NA	rs6658227	0.21	0.21	0.195	0.187899	0.1441	0.254	0.098	0.298	0.0798	0.14	0.3	0.1	0.3	0.1479	0.3	0	D	0.969	D	0.883	P	0.007	U	0.000	P	3.465	M	4.6	T	-0.993	T	0.000	T	0.299	2.544	14.47	2.05	1.124	2.852	11.965	2.544357	2.544357	0	0.138023	0.273718	NA	0.152	NA	14.4033104
245	1	9305445	9305445	A	C	exonic	H6PD	NA	nonsynonymous SNV	H6PD:NM_004285:exon2:c.A452C:p.D151A	exonic	ENSG00000049239	NA	nonsynonymous SNV	ENSG00000049239:ENST00000377403:exon2:c.A452C:p.D151A,ENSG00000049239:ENST00000602477:exon2:c.A485C:p.D162A	Score=401;Name=lod=57	NA	1p36.22	Score=755;Name=V$STAT1_01	NA	NA	NA	rs34603401	0.08	0.08	0.047	0.0760783	0.163	0.001	0.1023	0.0053	0.1411	0.16	0.0017	0.12	0.01	0.1203	0.16	0.19	T	0.698	P	0.338	B	0.000	D	0.000	P	1.535	L	-4.72	D	-0.833	T	0.023	T	0.166	2.353	13.83	4.17	2.134	5.824	11.008	2.353386	2.353386	NA	0.151977	0.027236	NA	0.101	NA	14.3980564
245	12	124427306	124427306	T	A	exonic	CCDC92	NA	nonsynonymous SNV	CCDC92:NM_025140:exon4:c.A208T:p.S70C	exonic	ENSG00000119242	NA	nonsynonymous SNV	ENSG00000119242:ENST00000545135:exon2:c.A157T:p.S53C,ENSG00000119242:ENST00000545891:exon3:c.A157T:p.S53C,ENSG00000119242:ENST00000238156:exon4:c.A208T:p.S70C,ENSG00000119242:ENST00000535556:exon4:c.A157T:p.S53C,ENSG00000119242:ENST00000539551:exon5:c.A208T:p.S70C,ENSG00000119242:ENST00000539761:exon6:c.A208T:p.S70C	Score=361;Name=lod=39	NA	12q24.31	NA	NA	NA	NA	rs11057401	0.26	0.26	0.253	0.250399	0.3489	0.0794	0.3184	0.3109	0.1953	0.34	0.09	0.31	0.31	0.2797	0.34	0.01	D	1.0	D	0.971	D	0.001	D	0.000	P	2.44	M	0.86	T	-1.056	T	0.000	T	0.269	4.43	23.5	3.44	0.469	3.019	9.493	4.429598	4.429598	0.01	0.309419	0.32433	ID=COSM1359878;OCCURENCE=1(large_intestine)	0.29	NA	14.3953144
246	11	4608542	4608542	C	T	exonic	OR52I2	NA	nonsynonymous SNV	OR52I2:NM_001005170:exon1:c.C500T:p.T167M	exonic	ENSG00000226288	NA	nonsynonymous SNV	ENSG00000226288:ENST00000312614:exon1:c.C500T:p.T167M	Score=259;Name=lod=15	NA	11p15.4	NA	NA	NA	NA	rs1847632	0.39	0.39	0.331	0.411542	0.326	0.5585	0.4121	0.2852	0.5184	0.35	0.58	0.39	0.24	0.3486	0.58	0	D	1.0	D	0.961	D	0.000	D	0.984	P	3.705	H	0.89	T	-0.906	T	0.000	T	0.287	0.926	8.772	3.26	0.984	0.878	6.997	0.926203	NA	0	0.281061	0.274875	NA	0.239	NA	14.3776724
247	12	121691096	121691096	G	A	exonic	CAMKK2	NA	nonsynonymous SNV	CAMKK2:NM_001270486:exon9:c.C1087T:p.R363C,CAMKK2:NM_001270485:exon10:c.C1087T:p.R363C,CAMKK2:NM_006549:exon10:c.C1087T:p.R363C,CAMKK2:NM_153499:exon10:c.C1087T:p.R363C,CAMKK2:NM_153500:exon10:c.C1087T:p.R363C,CAMKK2:NM_172214:exon10:c.C1087T:p.R363C,CAMKK2:NM_172215:exon10:c.C1087T:p.R363C,CAMKK2:NM_172216:exon10:c.C1087T:p.R363C,CAMKK2:NM_172226:exon10:c.C1087T:p.R363C	exonic	ENSG00000110931	NA	nonsynonymous SNV	ENSG00000110931:ENST00000545538:exon4:c.C448T:p.R150C,ENSG00000110931:ENST00000392474:exon9:c.C1087T:p.R363C,ENSG00000110931:ENST00000324774:exon10:c.C1087T:p.R363C,ENSG00000110931:ENST00000337174:exon10:c.C1087T:p.R363C,ENSG00000110931:ENST00000347034:exon10:c.C1087T:p.R363C,ENSG00000110931:ENST00000392473:exon10:c.C1087T:p.R363C,ENSG00000110931:ENST00000402834:exon10:c.C1087T:p.R363C,ENSG00000110931:ENST00000404169:exon10:c.C1087T:p.R363C,ENSG00000110931:ENST00000412367:exon10:c.C1087T:p.R363C,ENSG00000110931:ENST00000446440:exon10:c.C1087T:p.R363C,ENSG00000110931:ENST00000538733:exon10:c.C1087T:p.R363C	Score=500;Name=lod=144	NA	12q24.31	NA	NA	NA	NA	rs1132780	0.23	0.23	0.205	0.241214	0.1491	0.2778	0.2839	0.2799	0.2157	0.15	0.26	0.26	0.29	0.1825	0.29	0.01	D	0.981	D	0.729	P	0.000	D	0.000	P	1.045	L	-0.25	T	-1.067	T	0.000	T	0.348	2.17	13.21	4.47	1.279	2.049	9.037	2.169524	2.169524	0.01	0.129535	0.280073	NA	0.225	NA	14.3721984
248	4	106859549	106859549	G	C	exonic	NPNT	NA	nonsynonymous SNV	NPNT:NM_001033047:exon5:c.G477C:p.Q159H,NPNT:NM_001184692:exon5:c.G477C:p.Q159H,NPNT:NM_001184690:exon6:c.G528C:p.Q176H,NPNT:NM_001184691:exon6:c.G567C:p.Q189H,NPNT:NM_001184693:exon6:c.G567C:p.Q189H	exonic	ENSG00000168743	NA	nonsynonymous SNV	ENSG00000168743:ENST00000305572:exon5:c.G477C:p.Q159H,ENSG00000168743:ENST00000379987:exon5:c.G477C:p.Q159H,ENSG00000168743:ENST00000504304:exon5:c.G165C:p.Q55H,ENSG00000168743:ENST00000514622:exon5:c.G477C:p.Q159H,ENSG00000168743:ENST00000427316:exon6:c.G567C:p.Q189H,ENSG00000168743:ENST00000453617:exon6:c.G528C:p.Q176H,ENSG00000168743:ENST00000506666:exon6:c.G567C:p.Q189H,ENSG00000168743:ENST00000503451:exon7:c.G618C:p.Q206H	Score=521;Name=lod=174	NA	4q24	NA	NA	NA	NA	rs35132891	0.32	0.32	0.31	0.324681	0.334	0.1825	0.3329	0.4607	0.272	0.32	0.2	0.35	0.43	0.3141	0.43	0.01	D	0.997	D	0.947	D	0.000	D	0.032	P	2.015	M	1.3	T	-1.148	T	0.000	T	0.227	3.345	17.26	3.49	0.698	3.803	8.696	3.344923	3.344923	0.04	0.325233	0.410803	NA	0.377	NA	14.3600004
249	4	47901476	47901476	G	A	exonic	NFXL1	NA	nonsynonymous SNV	NFXL1:NM_152995:exon6:c.C737T:p.P246L	exonic	ENSG00000170448	NA	nonsynonymous SNV	ENSG00000170448:ENST00000329043:exon6:c.C737T:p.P246L,ENSG00000170448:ENST00000381538:exon6:c.C737T:p.P246L,ENSG00000170448:ENST00000464756:exon6:c.C737T:p.P246L,ENSG00000170448:ENST00000507489:exon6:c.C737T:p.P246L	Score=544;Name=lod=216	NA	4p12	NA	NA	NA	NA	rs12651301	0.42	0.42	0.423	0.388778	0.327	0.6002	0.3415	0.329	0.3487	0.35	0.63	0.35	0.33	0.3513	0.63	0.32	T	1.0	D	1.0	D	0.000	D	0.000	P	2.255	M	0.91	T	-0.904	T	0.000	T	0.358	3.343	17.25	5.58	2.625	9.434	19.558	3.343126	3.343126	0	0.31	0.332501	NA	0.471	NA	14.3450334
250	17	21204187	21204187	G	T	exonic	MAP2K3	NA	nonsynonymous SNV	MAP2K3:NM_002756:exon5:c.G194T:p.R65L,MAP2K3:NM_145109:exon5:c.G281T:p.R94L	exonic	ENSG00000034152	NA	nonsynonymous SNV	ENSG00000034152:ENST00000342679:exon5:c.G281T:p.R94L,ENSG00000034152:ENST00000361818:exon5:c.G194T:p.R65L,ENSG00000034152:ENST00000496046:exon5:c.G281T:p.R94L,ENSG00000034152:ENST00000526076:exon5:c.G194T:p.R65L,ENSG00000034152:ENST00000316920:exon6:c.G194T:p.R65L	Score=461;Name=lod=100	NA	17p11.2	NA	NA	NA	NA	rs56067280	0.5	0.5	0.52	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.4998	0.5	0.01	D	0.982	D	0.671	P	0.000	D	0.000	P	0.595	N	1.09	T	-1.001	T	0.000	T	0.953	3.314	17.14	5.08	2.359	7.845	18.482	3.314111	3.314111	0	NA	NA	ID=COSM288153;OCCURENCE=1(large_intestine)	0.5	NA	14.3335334
250	17	21202191	21202191	C	A	exonic	MAP2K3	NA	nonsynonymous SNV	MAP2K3:NM_002756:exon3:c.C31A:p.P11T,MAP2K3:NM_145109:exon3:c.C118A:p.P40T	exonic	ENSG00000034152	NA	nonsynonymous SNV	ENSG00000034152:ENST00000342679:exon3:c.C118A:p.P40T,ENSG00000034152:ENST00000361818:exon3:c.C31A:p.P11T,ENSG00000034152:ENST00000496046:exon3:c.C118A:p.P40T,ENSG00000034152:ENST00000526076:exon3:c.C31A:p.P11T,ENSG00000034152:ENST00000316920:exon4:c.C31A:p.P11T	Score=381;Name=lod=47	NA	17p11.2	Score=964;Name=V$ZIC1_01	NA	NA	NA	rs33911218	0.5	0.5	NA	0.000199681	NA	NA	NA	0.0008	NA	0.5	0.5	0.5	0.5	0.5	0.5	0.15	T	0.734	P	0.326	B	0.000	D	1.000	D	0.95	L	-0.65	T	-0.940	T	0.000	T	0.453	2.558	14.51	4.95	1.500	7.043	17.133	2.557959	2.557959	0.06	NA	NA	NA	0.5	NA	14.3333334
250	17	49072486	49072486	C	T	exonic	SPAG9	NA	nonsynonymous SNV	SPAG9:NM_001251971:exon14:c.G1687A:p.D563N,SPAG9:NM_003971:exon17:c.G2116A:p.D706N,SPAG9:NM_001130527:exon18:c.G2128A:p.D710N,SPAG9:NM_001130528:exon18:c.G2158A:p.D720N	exonic	ENSG00000008294	NA	nonsynonymous SNV	ENSG00000008294:ENST00000510283:exon14:c.G1687A:p.D563N,ENSG00000008294:ENST00000357122:exon17:c.G2116A:p.D706N,ENSG00000008294:ENST00000262013:exon18:c.G2158A:p.D720N,ENSG00000008294:ENST00000505279:exon18:c.G2128A:p.D710N	Score=325;Name=lod=28	NA	17q21.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.03	D	0.449	B	0.265	B	0.001	N	1.000	D	1.75	L	1.88	T	-1.067	T	0.087	T	0.055	4.233	22	5.59	2.621	7.135	19.596	4.2328	4.2328	0.01	NA	NA	NA	NA	NA	14.3333334
250	4	126373317	126373317	C	T	exonic	FAT4	NA	nonsynonymous SNV	FAT4:NM_024582:exon9:c.C11146T:p.R3716C	exonic	ENSG00000196159	NA	nonsynonymous SNV	ENSG00000196159:ENST00000335110:exon9:c.C6040T:p.R2014C,ENSG00000196159:ENST00000394329:exon9:c.C11146T:p.R3716C	Score=343;Name=lod=33	NA	4q28.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00001647	NA	0.01	D	0.219	B	0.034	B	0.003	U	1.000	D	1.845	L	0.53	T	-0.862	T	0.156	T	0.941	2.938	15.79	4.92	1.445	4.651	14.756	2.937846	2.937846	0	NA	NA	ID=COSM232313,COSM232312;OCCURENCE=2(skin)	NA	NA	14.3333169
250	8	22267473	22267473	T	G	exonic	SLC39A14	NA	nonsynonymous SNV	SLC39A14:NM_015359:exon4:c.T472G:p.F158V	exonic	ENSG00000104635	NA	nonsynonymous SNV	ENSG00000104635:ENST00000359741:exon4:c.T472G:p.F158V	Score=568;Name=lod=272	NA	8p21.3	Score=836;Name=V$RREB1_01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00001648	NA	0.28	T	0.007	B	0.039	B	.	.	1.000	D	.	.	0.9	T	-1.077	T	0.073	T	0.165	2.572	14.56	4.08	0.995	3.230	6.333	2.571512	2.571512	0.3	NA	NA	NA	NA	NA	14.3333169
250	9	95263039	95263039	T	C	exonic	ECM2	NA	nonsynonymous SNV	ECM2:NM_001197295:exon9:c.A1835G:p.H612R,ECM2:NM_001197296:exon9:c.A1835G:p.H612R,ECM2:NM_001393:exon9:c.A1901G:p.H634R	exonic	ENSG00000106823	NA	nonsynonymous SNV	ENSG00000106823:ENST00000344604:exon9:c.A1901G:p.H634R,ENSG00000106823:ENST00000444490:exon9:c.A1835G:p.H612R	Score=568;Name=lod=272	NA	9q22.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00001655	NA	0.46	T	0.158	B	0.065	B	0.000	D	1.000	D	-0.93	N	0.72	T	-1.061	T	0.043	T	0.195	1.868	12.2	3.96	2.058	3.539	9.821	1.867649	1.867649	0.51	NA	NA	NA	NA	NA	14.3333168
250	7	26224829	26224829	C	G	exonic	NFE2L3	NA	nonsynonymous SNV	NFE2L3:NM_004289:exon4:c.C1511G:p.P504R	exonic	ENSG00000050344	NA	nonsynonymous SNV	ENSG00000050344:ENST00000056233:exon4:c.C1511G:p.P504R	NA	NA	7p15.2	NA	Name=Pol2-4H8,RXRA,Pol2	Name=52	NA	rs143155770	0.0005	0.0005	NA	NA	NA	NA	NA	NA	NA	0.0013	NA	NA	NA	0.00004942	0.0013	0.02	D	0.083	B	0.024	B	0.095	N	1.000	N	2.165	M	1.39	T	-0.952	T	0.123	T	0.244	2.739	15.12	5.13	2.564	1.796	18.960	2.73945	2.73945	0.01	0.000233	0	NA	NA	NA	14.333051
250	14	105353232	105353232	A	G	exonic	CEP170B	NA	nonsynonymous SNV	CEP170B:NM_015005:exon11:c.A2446G:p.I816V,CEP170B:NM_001112726:exon12:c.A2656G:p.I886V	exonic	ENSG00000099814	NA	nonsynonymous SNV	ENSG00000099814:ENST00000418279:exon11:c.A2446G:p.I816V,ENSG00000099814:ENST00000556508:exon11:c.A2446G:p.I816V,ENSG00000099814:ENST00000414716:exon12:c.A2656G:p.I886V,ENSG00000099814:ENST00000453495:exon12:c.A2659G:p.I887V	Score=278;Name=lod=18	NA	14q32.33	NA	NA	NA	NA	rs373327078	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00004316	0.0002	0.02	D	0.985	D	0.952	D	0.000	N	1.000	D	1.655	L	0.4	T	-0.652	T	0.262	T	0.177	1.781	11.92	2.15	0.592	3.784	7.858	1.781197	1.781197	0	0.000243	0	NA	NA	NA	14.3330472
250	1	159410402	159410402	C	T	exonic	OR10J1	NA	nonsynonymous SNV	OR10J1:NM_012351:exon1:c.C854T:p.S285L	exonic	ENSG00000196184	NA	nonsynonymous SNV	ENSG00000196184:ENST00000423932:exon1:c.C854T:p.S285L	NA	NA	1q23.2	NA	NA	NA	NA	rs144480627	NA	NA	NA	0.000399361	NA	NA	NA	0.0015	NA	NA	NA	NA	NA	0.0003	0.0018	0	D	1.0	D	0.99	D	0.004	N	1.000	N	2.925	M	8.39	T	-1.040	T	0.001	T	0.325	3.114	16.41	3.51	1.189	3.629	10.227	3.114426	3.114426	0	0	0.001816	NA	NA	NA	14.3330334
250	17	44248783	44248783	G	T	exonic	KANSL1	NA	nonsynonymous SNV	KANSL1:NM_001193466:exon2:c.C727A:p.Q243K,KANSL1:NM_015443:exon2:c.C727A:p.Q243K,KANSL1:NM_001193465:exon3:c.C727A:p.Q243K	exonic	ENSG00000120071	NA	nonsynonymous SNV	ENSG00000120071:ENST00000432791:exon1:c.C727A:p.Q243K,ENSG00000120071:ENST00000575318:exon1:c.C727A:p.Q243K,ENSG00000120071:ENST00000262419:exon2:c.C727A:p.Q243K,ENSG00000120071:ENST00000572904:exon2:c.C727A:p.Q243K,ENSG00000120071:ENST00000574590:exon2:c.C727A:p.Q243K	Score=472;Name=lod=110	NA	17q21.31	Score=767;Name=V$STAT3_01	NA	NA	NA	rs142096969	NA	NA	NA	0.000798722	0.001	NA	0.0043	NA	NA	NA	NA	NA	NA	0.0018	0.0024	0.5	T	0.103	B	0.058	B	0.000	D	1.000	D	0.345	N	2.72	T	-0.977	T	0.022	T	0.492	1.556	11.16	6.04	2.873	2.286	13.678	1.556207	1.556207	0.47	0.002442	0.000227	NA	NA	NA	14.3280914
250	8	110131553	110131553	G	A	exonic	TRHR	NA	nonsynonymous SNV	TRHR:NM_003301:exon2:c.G1066A:p.V356I	exonic	ENSG00000174417	NA	nonsynonymous SNV	ENSG00000174417:ENST00000311762:exon2:c.G1066A:p.V356I,ENSG00000174417:ENST00000518632:exon3:c.G1066A:p.V356I	Score=426;Name=lod=72	NA	8q23.1	Score=912;Name=V$TCF11_01	NA	NA	NA	rs147019235	0.0014	0.0014	0	0.000798722	0.003	NA	NA	0.0008	NA	0.004	NA	NA	NA	0.0021	0.004	0.28	T	0.448	B	0.091	B	0.000	N	1.000	D	2.22	M	-0.23	T	-0.689	T	0.247	T	0.064	3.02	16.07	4.93	1.471	4.569	14.268	3.02009	3.02009	0.03	0.001861	0.002497	NA	NA	NA	14.3263724
251	17	4863540	4863540	T	C	exonic	SPAG7	NA	nonsynonymous SNV	SPAG7:NM_004890:exon4:c.A316G:p.I106V	exonic	ENSG00000091640	NA	nonsynonymous SNV	ENSG00000091640:ENST00000206020:exon4:c.A316G:p.I106V,ENSG00000091640:ENST00000573366:exon4:c.A163G:p.I55V,ENSG00000091640:ENST00000575142:exon4:c.A283G:p.I95V	Score=613;Name=lod=415	NA	17p13.2	Score=760;Name=V$TCF11MAFG_01	NA	NA	NA	rs73343382	0.02	0.02	0.023	0.0307508	0.001	NA	0.0058	0.1127	NA	0.0013	NA	0.0028	0.09	0.0092	0.09	1	T	0.003	B	0.008	B	0.000	D	0.987	D	0.76	N	0.94	T	-1.113	T	0.003	T	0.09	-0.732	0.871	5.3	2.225	1.809	13.238	-0.732127	NA	0.85	0.000477	0.089985	NA	0.058	NA	14.3226564
251	15	69328226	69328226	C	T	exonic	NOX5	NA	nonsynonymous SNV	NOX5:NM_001184779:exon7:c.C1054T:p.L352F,NOX5:NM_001184780:exon7:c.C1033T:p.L345F,NOX5:NM_024505:exon7:c.C1138T:p.L380F	exonic	ENSG00000255346	NA	nonsynonymous SNV	ENSG00000255346:ENST00000525143:exon4:c.C538T:p.L180F,ENSG00000255346:ENST00000388866:exon7:c.C1138T:p.L380F,ENSG00000255346:ENST00000455873:exon7:c.C1033T:p.L345F,ENSG00000255346:ENST00000530406:exon7:c.C1054T:p.L352F,ENSG00000255346:ENST00000260364:exon8:c.C1084T:p.L362F,ENSG00000255346:ENST00000448182:exon8:c.C1000T:p.L334F	Score=530;Name=lod=190	NA	15q23	NA	Name=CTCF,Max,Rad21,SMC3_(ab9263),E2F6_(H-50),Znf143_(16618-1-AP),CTCFL_(SC-98982),c-Myc,CTCF_(C-20),CTCF_(SC-5916)	Name=30	NA	rs12907196	0.31	0.31	0.294	0.271166	0.5358	0.124	0.33	0.1135	0.3221	0.54	0.14	0.35	0.11	0.4233	0.56	0.12	T	0.975	D	0.791	P	0.039	N	0.003	P	2.105	M	-3.14	D	-1.022	T	0.000	T	0.148	2.599	14.65	1.18	1.433	0.984	6.601	2.599053	2.599053	0.01	0.555142	0.171818	NA	0.304	NA	14.3190914
251	8	94738629	94738629	G	A	exonic	FAM92A1	NA	unknown	UNKNOWN	exonic	ENSG00000188343	NA	nonsynonymous SNV	ENSG00000188343:ENST00000519679:exon3:c.G200A:p.R67Q,ENSG00000188343:ENST00000517718:exon4:c.G200A:p.R67Q,ENSG00000188343:ENST00000521641:exon4:c.G200A:p.R67Q,ENSG00000188343:ENST00000423990:exon7:c.G551A:p.R184Q,ENSG00000188343:ENST00000452913:exon8:c.G665A:p.R222Q,ENSG00000188343:ENST00000518322:exon8:c.G665A:p.R222Q,ENSG00000188343:ENST00000518116:exon9:c.G751A:p.E251K	Score=628;Name=lod=474	NA	8q22.1	NA	NA	NA	NA	rs36117362	0.08	0.08	0.067	0.0623003	0.1252	NA	0.1037	0.0492	0.0501	0.13	NA	0.14	0.04	0.1015	0.14	0.01	D	0.325	B	0.041	B	0.000	D	1.000	D	2.135	M	2.54	T	-1.149	T	0.001	T	0.793	3.49	17.85	5.5	2.732	7.835	19.762	3.490072	3.490072	0	0.124049	0.050633	NA	0.094	NA	14.3159177
252	3	97983711	97983711	T	C	exonic	OR5H6	NA	nonsynonymous SNV	OR5H6:NM_001005479:exon1:c.T583C:p.C195R	exonic	ENSG00000230301	NA	nonsynonymous SNV	ENSG00000230301:ENST00000383696:exon1:c.T583C:p.C195R	Score=352;Name=lod=36	NA	3q11.2	NA	NA	NA	NA	rs9853887	0.64	0.64	0.65	0.625	0.6849	0.621	0.598	0.587	0.638	0.68	0.68	0.57	0.59	0.656	0.68	0	D	0.999	D	0.991	D	0.000	D	0.000	P	4.42	H	0.02	T	-0.900	T	0.000	T	0.21	2.723	15.07	2.19	1.006	6.506	7.966	2.722741	2.722741	0	0.678771	0.631244	NA	0.457	NA	14.3136624
252	7	143657232	143657232	A	G	exonic	OR2F1	NA	nonsynonymous SNV	OR2F1:NM_012369:exon1:c.A169G:p.T57A	exonic	ENSG00000213215	NA	nonsynonymous SNV	ENSG00000213215:ENST00000392899:exon1:c.A169G:p.T57A	Score=304;Name=lod=23	NA	7q35	NA	NA	NA	NA	rs61731392	0.04	0.04	0.034	0.0491214	0.003	NA	0.0216	0.1717	0.001	0.0013	NA	0.03	0.17	0.0155	0.17	0	D	0.409	B	0.11	B	0.000	D	0.772	P	2.595	M	7.19	T	-0.866	T	0.000	T	0.272	2.526	14.41	5.65	2.371	2.957	13.874	2.525848	2.525848	0.01	0.002211	0.148888	NA	0.058	NA	14.3126224
252	7	94946084	94946084	A	T	exonic	PON1	NA	nonsynonymous SNV	PON1:NM_000446:exon3:c.T163A:p.L55M	exonic	ENSG00000005421	NA	nonsynonymous SNV	ENSG00000005421:ENST00000222381:exon3:c.T163A:p.L55M,ENSG00000005421:ENST00000433729:exon3:c.T163A:p.L55M,ENSG00000005421:ENST00000542556:exon3:c.T163A:p.L55M	Score=505;Name=lod=151	NA	7q21.3	NA	Name=PU.1	Name=4	NA	rs854560	0.2	0.2	0.199	0.182708	0.3579	0.0337	0.2061	0.1498	0.184	0.35	0.03	0.24	0.15	0.2913	0.37	0.02	D	0.983	D	0.925	D	0.001	D	0.500	P	1.845	L	0.79	T	-1.032	T	0.000	T	0.226	3.71	18.84	-1.76	-0.066	0.196	4.210	3.7095	3.7095	0.04	0.373023	0.172946	NA	0.275	CLINSIG=other|other|pathogenic;CLNDBN=Coronary_artery_disease\x2c_susceptibility_to|Microvascular_complications_of_diabetes_5|Enzyme_activity_finding;CLNREVSTAT=single|single|single;CLNACC=RCV000014742.1|RCV000014743.1|RCV000133465.1;CLNDSDB=MedGen|MedGen:OMIM|MedGen:SNOMED_CT;CLNDSDBID=C1840169|C2674665:612633|C1827841:424017009	14.3111104
252	11	59211188	59211188	G	A	exonic	OR5A1	NA	nonsynonymous SNV	OR5A1:NM_001004728:exon1:c.G547A:p.D183N	exonic	ENSG00000172320	NA	nonsynonymous SNV	ENSG00000172320:ENST00000302030:exon1:c.G547A:p.D183N	Score=436;Name=lod=79	NA	11q12.1	Score=939;Name=V$ZIC3_01	NA	NA	NA	rs6591536	0.62	0.62	0.615	0.635383	0.6938	0.7609	0.5836	0.4433	0.7423	0.68	0.73	0.57	0.46	0.66	0.73	0.02	D	1.0	D	1.0	D	0.001	N	0.001	P	2.755	M	8.59	T	-1.097	T	0.000	T	0.132	3.92	19.94	5.98	2.835	7.834	14.736	3.920313	3.920313	0	0.673458	0.4791	NA	0.659	NA	14.3060754
252	3	436384	436384	A	T	exonic	CHL1	NA	nonsynonymous SNV	CHL1:NM_001253388:exon22:c.A2923T:p.T975S,CHL1:NM_001253387:exon23:c.A2875T:p.T959S,CHL1:NM_006614:exon24:c.A2923T:p.T975S	exonic	ENSG00000134121	NA	nonsynonymous SNV	ENSG00000134121:ENST00000397491:exon23:c.A2875T:p.T959S,ENSG00000134121:ENST00000256509:exon24:c.A2923T:p.T975S	Score=428;Name=lod=73	NA	3p26.3	NA	NA	NA	NA	rs145162591	0.01	0.01	0.004	0.00299521	0.0099	NA	0.0058	0.0008	NA	0.01	NA	0.01	0.002	0.0062	0.012	0.17	T	0.609	P	0.565	P	0.000	D	1.000	D	1.435	L	0.44	T	-0.843	T	0.157	T	0.25	3.709	18.84	5.47	2.060	8.158	15.509	3.708601	3.708601	0.15	0.01186	0.002724	NA	0.007	NA	14.3053734
252	4	169369920	169369920	C	T	exonic	DDX60L	NA	nonsynonymous SNV	DDX60L:NM_001012967:exon9:c.G1007A:p.C336Y	exonic	ENSG00000181381	NA	nonsynonymous SNV	ENSG00000181381:ENST00000505863:exon3:c.G191A:p.C64Y,ENSG00000181381:ENST00000260184:exon9:c.G1007A:p.C336Y,ENSG00000181381:ENST00000505890:exon9:c.G1007A:p.C336Y,ENSG00000181381:ENST00000511577:exon9:c.G1007A:p.C336Y	Score=358;Name=lod=38	NA	4q32.3	NA	NA	NA	NA	rs12507582	0.37	0.37	0.333	0.328474	0.3429	0.619	0.5159	0.0212	0.2965	0.34	0.65	0.47	0.03	0.3539	0.65	0	D	1.0	D	0.999	D	0.001	U	0.989	P	2.08	M	2.41	T	-0.954	T	0.000	T	0.386	2.402	13.99	2.46	1.346	3.413	9.910	2.402486	2.402486	0	0.331199	0.072808	NA	0.29	NA	14.3053344
253	1	92163646	92163646	G	A	exonic	TGFBR3	NA	nonsynonymous SNV	TGFBR3:NM_001195683:exon15:c.C2326T:p.P776S,TGFBR3:NM_003243:exon15:c.C2329T:p.P777S,TGFBR3:NM_001195684:exon16:c.C2326T:p.P776S	exonic	ENSG00000069702	NA	nonsynonymous SNV	ENSG00000069702:ENST00000525962:exon14:c.C2329T:p.P777S,ENSG00000069702:ENST00000212355:exon15:c.C2329T:p.P777S,ENSG00000069702:ENST00000465892:exon15:c.C2326T:p.P776S,ENSG00000069702:ENST00000370399:exon16:c.C2326T:p.P776S	Score=456;Name=lod=95	NA	1p22.1	NA	Name=CEBPB	Name=68	NA	rs2228363	0.01	0.01	0.004	0.00419329	0.0099	NA	0.0086	NA	0.0051	0.01	NA	0.01	NA	0.0066	0.012	.	.	0.01	B	0.009	B	0.075	N	0.876	D	-1.1	N	1.5	T	-0.998	T	0.012	T	0.212	2.033	12.76	5.03	2.470	4.431	14.219	2.03337	2.03337	0.61	0.012093	0.001589	NA	NA	NA	14.3047404
253	11	111635566	111635566	C	T	exonic	PPP2R1B	NA	nonsynonymous SNV	PPP2R1B:NM_001177562:exon3:c.G269A:p.G90D,PPP2R1B:NM_001177563:exon3:c.G269A:p.G90D,PPP2R1B:NM_002716:exon3:c.G269A:p.G90D,PPP2R1B:NM_181699:exon3:c.G269A:p.G90D	exonic	ENSG00000137713	NA	nonsynonymous SNV	ENSG00000137713:ENST00000311129:exon3:c.G269A:p.G90D,ENSG00000137713:ENST00000341980:exon3:c.G269A:p.G90D,ENSG00000137713:ENST00000393055:exon3:c.G269A:p.G90D,ENSG00000137713:ENST00000527614:exon3:c.G269A:p.G90D,ENSG00000137713:ENST00000531373:exon3:c.G224A:p.G75D,ENSG00000137713:ENST00000534521:exon3:c.G269A:p.G90D	Score=654;Name=lod=606	NA	11q23.1	NA	NA	Name=53	NA	rs1805076	0.01	0.01	0.006	0.00359425	0.0139	NA	0.0043	NA	0.001	0.02	NA	0.01	NA	0.0063	0.02	0.27	T	0.0	B	0.0	B	0.031	N	1.000	D	-1.415	N	3.45	T	-1.061	T	0.011	T	0.302	0.444	6.409	3.22	1.383	2.531	9.573	0.443517	NA	0.31	0.012218	0.002726	NA	0.007	CLINSIG=pathogenic;CLNDBN=Lung_cancer;CLNREVSTAT=single;CLNACC=RCV000007000.1;CLNDSDB=MedGen:OMIM:SNOMED_CT;CLNDSDBID=C0684249:211980:187875007	14.3009154
254	1	26665873	26665873	C	G	exonic	AIM1L	NA	nonsynonymous SNV	AIM1L:NM_001039775:exon6:c.G3252C:p.K1084N	exonic	ENSG00000176092	NA	nonsynonymous SNV	ENSG00000176092:ENST00000308182:exon5:c.G117C:p.K39N,ENSG00000176092:ENST00000527815:exon5:c.G630C:p.K210N	Score=504;Name=lod=149	NA	1p36.11	NA	Name=CTCF,ELF1_(SC-631),CTCF_(SC-5916)	Name=5	NA	rs142035096	0.01	0.01	NA	0.0071885	0.0159	NA	0.0101	0.0015	0.0112	0.02	NA	0.01	0.002	0.0125	0.02	0.39	T	0.837	P	0.597	P	0.000	D	1.000	D	2.25	M	-1.04	T	-0.656	T	0.244	T	0.044	2.343	13.79	0.98	-0.014	-0.070	4.136	2.342862	2.342862	0.21	0.011047	0.004085	NA	NA	NA	14.2938864
254	16	72831111	72831111	G	C	exonic	ZFHX3	NA	nonsynonymous SNV	ZFHX3:NM_001164766:exon8:c.C2728G:p.L910V,ZFHX3:NM_006885:exon9:c.C5470G:p.L1824V	exonic	ENSG00000140836	NA	nonsynonymous SNV	ENSG00000140836:ENST00000397992:exon8:c.C2728G:p.L910V,ENSG00000140836:ENST00000268489:exon9:c.C5470G:p.L1824V	Score=361;Name=lod=39	NA	16q22.2	NA	NA	NA	NA	rs79037957	0.01	0.01	0.009	0.00439297	0.0189	NA	0.0014	0.0008	0.001	0.02	0.0017	NA	0.002	0.0111	0.02	0.02	D	0.948	P	0.458	P	0.001	N	0.999	D	1.04	L	-1.28	T	-0.463	T	0.221	T	0.394	0.137	4.736	5.07	1.528	1.629	10.661	0.136913	NA	NA	0.012674	0.002502	NA	NA	NA	14.2906594
254	2	96798440	96798440	C	T	exonic	ASTL	NA	nonsynonymous SNV	ASTL:NM_001002036:exon6:c.G476A:p.R159H	exonic	ENSG00000188886	NA	nonsynonymous SNV	ENSG00000188886:ENST00000342380:exon6:c.G476A:p.R159H	NA	NA	2q11.1	NA	NA	NA	NA	rs61735195	0.01	0.01	0.002	0.00658946	0.0129	NA	0.0173	0.0015	0.0061	0.01	NA	0.02	NA	0.0124	0.02	0.04	D	0.952	P	0.507	P	0.000	D	0.982	N	2.25	M	-0.24	T	-0.710	T	0.177	T	0.127	3.591	18.29	3.69	2.211	2.049	11.246	3.591213	3.591213	0.04	0.018953	0.00227	NA	NA	NA	14.2890804
254	15	91827271	91827271	A	G	exonic	SV2B	NA	nonsynonymous SNV	SV2B:NM_001167580:exon10:c.A1075G:p.I359V,SV2B:NM_014848:exon12:c.A1528G:p.I510V	exonic	ENSG00000185518	NA	nonsynonymous SNV	ENSG00000185518:ENST00000330276:exon10:c.A1528G:p.I510V,ENSG00000185518:ENST00000545111:exon10:c.A1075G:p.I359V,ENSG00000185518:ENST00000394232:exon11:c.A1528G:p.I510V,ENSG00000185518:ENST00000557410:exon12:c.A1528G:p.I510V	Score=618;Name=lod=433	NA	15q26.1	NA	Name=CTCF	NA	NA	rs117361551	0.01	0.01	0.004	0.0111821	0.0169	NA	0.013	0.0008	0.0297	0.02	NA	0.01	NA	0.0126	0.022	0.61	T	0.094	B	0.123	B	0.000	D	0.999	D	1.2	L	1.0	T	-1.070	T	0.051	T	0.123	1.275	10.16	5.61	2.152	2.317	14.687	1.274723	1.274723	0.5	0.014774	0.00273	NA	0.014	NA	14.2890594
254	1	26110236	26110236	G	A	exonic	MAN1C1	NA	nonsynonymous SNV	MAN1C1:NM_020379:exon12:c.G1849A:p.V617M	exonic	ENSG00000117643	NA	nonsynonymous SNV	ENSG00000117643:ENST00000374329:exon11:c.G1162A:p.V388M,ENSG00000117643:ENST00000374332:exon12:c.G1849A:p.V617M,ENSG00000117643:ENST00000263979:exon13:c.G1309A:p.V437M	NA	NA	1p36.11	Score=756;Name=V$STAT3_01	NA	NA	NA	rs79507311	0.01	0.01	0.011	0.0061901	0.0239	0.001	0.0043	0.0008	0.002	0.02	0.0017	0.01	0.002	0.0104	0.02	0.04	D	0.999	D	0.988	D	0.004	N	0.852	N	2.685	M	-0.74	T	-0.347	T	0.372	T	0.251	3.489	17.85	2.26	0.182	1.342	8.806	3.489365	3.489365	0	0.013837	0.001362	NA	0.029	NA	14.2851964
255	17	33269648	33269648	C	G	exonic	CCT6B	NA	nonsynonymous SNV	CCT6B:NM_001193529:exon6:c.G629C:p.G210A,CCT6B:NM_001193530:exon6:c.G605C:p.G202A,CCT6B:NM_006584:exon7:c.G740C:p.G247A	exonic	ENSG00000132141	NA	nonsynonymous SNV	ENSG00000132141:ENST00000585073:exon5:c.G314C:p.G105A,ENSG00000132141:ENST00000421975:exon6:c.G629C:p.G210A,ENSG00000132141:ENST00000436961:exon6:c.G605C:p.G202A,ENSG00000132141:ENST00000314144:exon7:c.G740C:p.G247A	Score=630;Name=lod=484	NA	17q12	NA	NA	NA	NA	rs2230553	0.27	0.27	0.258	0.243211	0.3728	0.2639	0.1859	0.149	0.2566	0.38	0.23	0.21	0.18	0.3089	0.38	0.03	D	0.588	P	0.458	P	0.000	D	0.000	P	3.255	M	-0.27	T	-1.074	T	0.000	T	0.211	3.245	16.88	4.06	2.220	7.019	14.094	3.244978	3.244978	0.01	0.367109	0.173864	NA	0.225	NA	14.2845244
255	2	218747073	218747073	A	C	exonic	TNS1	NA	nonsynonymous SNV	TNS1:NM_022648:exon15:c.T933G:p.I311M	exonic	ENSG00000079308	NA	nonsynonymous SNV	ENSG00000079308:ENST00000310858:exon12:c.T1026G:p.I342M,ENSG00000079308:ENST00000413554:exon12:c.T1137G:p.I379M,ENSG00000079308:ENST00000419504:exon14:c.T933G:p.I311M,ENSG00000079308:ENST00000430930:exon14:c.T933G:p.I311M,ENSG00000079308:ENST00000171887:exon15:c.T933G:p.I311M,ENSG00000079308:ENST00000446903:exon17:c.T1308G:p.I436M	Score=489;Name=lod=130	NA	2q35	Score=835;Name=V$OCT1_02	NA	NA	NA	rs11680854	0.01	0.01	0.005	0.0103834	0.0169	0.001	0.036	0.0023	0.0061	0.02	0.0017	0.03	0.0041	0.0157	0.03	0.06	T	1.0	D	0.997	D	0.003	U	0.999	D	2.165	M	-3.17	D	-0.941	T	0.093	T	0.589	2.998	16	0.438	-0.060	0.027	5.747	2.998004	2.998004	0	0.01907	0.004766	NA	NA	NA	14.2816634
255	19	7573098	7573098	T	A	exonic	C19orf45	NA	nonsynonymous SNV	C19orf45:NM_198534:exon9:c.T1300A:p.Y434N	exonic	ENSG00000198723	NA	nonsynonymous SNV	ENSG00000198723:ENST00000361664:exon9:c.T1300A:p.Y434N	Score=346;Name=lod=34	NA	19p13.2	Score=917;Name=V$MSX1_01	Name=Pol2,eGFP-JunD,FOSL1_(SC-183),c-Jun,c-Fos,Pol2-4H8,eGFP-FOS	NA	NA	rs475923	0.32	0.32	0.298	0.288339	0.3628	0.1746	0.3833	0.295	0.2526	0.37	0.2	0.42	0.3	0.327	0.42	0.8	T	1.0	D	0.999	D	0.020	N	0.556	P	1.905	M	1.24	T	-0.972	T	0.000	T	0.285	2.437	14.11	4.05	1.839	0.047	9.577	2.436592	2.436592	0.87	0.363922	0.298457	ID=COSM440623;OCCURENCE=1(breast)	0.362	NA	14.2796114
255	2	55544736	55544736	T	C	exonic	CCDC88A	NA	nonsynonymous SNV	CCDC88A:NM_001135597:exon20:c.A3563G:p.K1188R,CCDC88A:NM_001254943:exon20:c.A3563G:p.K1188R,CCDC88A:NM_018084:exon20:c.A3566G:p.K1189R	exonic	ENSG00000115355	NA	nonsynonymous SNV	ENSG00000115355:ENST00000412148:exon4:c.A701G:p.K234R,ENSG00000115355:ENST00000426576:exon6:c.A1091G:p.K364R,ENSG00000115355:ENST00000263630:exon20:c.A3566G:p.K1189R,ENSG00000115355:ENST00000336838:exon20:c.A3563G:p.K1188R,ENSG00000115355:ENST00000413716:exon20:c.A3563G:p.K1188R,ENSG00000115355:ENST00000436346:exon20:c.A3566G:p.K1189R	Score=581;Name=lod=306	NA	2p16.1	NA	NA	NA	NA	rs41281501	0.01	0.01	0.01	0.00798722	0.0308	NA	0.0043	NA	0.0061	0.04	NA	0.01	NA	0.0118	0.04	0.57	T	0.999	D	0.995	D	0.000	U	1.000	D	0.105	N	3.06	T	-1.098	T	0.026	T	0.115	1.298	10.25	4.77	1.066	4.970	11.906	1.297787	1.297787	0.54	0.011977	0.003858	NA	NA	NA	14.2787564
255	2	74699595	74699595	G	T	exonic	MRPL53	NA	nonsynonymous SNV	MRPL53:NM_053050:exon2:c.C95A:p.T32N	exonic	ENSG00000204822	NA	nonsynonymous SNV	ENSG00000204822:ENST00000258105:exon2:c.C95A:p.T32N	Score=504;Name=lod=149	NA	2p13.1	NA	Name=Pol2,Sin3Ak-20,KAP1,E2F6,ETS1,E2F6_(H-50)	Name=56	NA	rs78834087	0.01	0.01	0.007	0.00778754	0.0258	NA	0.0173	NA	0.001	0.02	NA	0.01	NA	0.0126	0.02	0.3	T	0.213	B	0.096	B	0.000	D	1.000	D	-0.345	N	0.91	T	-1.089	T	0.023	T	0.044	0.533	6.887	3.63	1.367	0.674	7.890	0.533193	NA	0.54	0.017093	0.002951	NA	NA	NA	14.2778404
256	6	29910572	29910572	C	T	exonic	HLA-A	NA	nonsynonymous SNV	HLA-A:NM_001242758:exon2:c.C112T:p.R38W,HLA-A:NM_002116:exon2:c.C112T:p.R38W	exonic	ENSG00000206503	NA	nonsynonymous SNV	ENSG00000206503:ENST00000376802:exon2:c.C112T:p.R38W,ENSG00000206503:ENST00000376806:exon2:c.C112T:p.R38W,ENSG00000206503:ENST00000376809:exon2:c.C112T:p.R38W,ENSG00000206503:ENST00000396634:exon4:c.C112T:p.R38W	Score=295;Name=lod=21	NA	6p22.1	NA	Name=CTCF,Pol2-4H8	Name=11	NA	rs45569434	0.04	0.04	0.067	NA	NA	NA	NA	NA	NA	0.03	0.01	0.06	0.06	0.0603	0.06	0	D	1.0	D	0.98	D	0.690	U	0.991	N	3.54	H	5.54	T	-0.994	T	0.009	T	0.742	2.152	13.15	1.87	0.363	0.209	5.323	2.151849	2.151849	0	NA	NA	ID=COSM1442948;OCCURENCE=1(large_intestine)	NA	NA	14.2730334
256	2	11927238	11927238	G	A	exonic	LPIN1	NA	nonsynonymous SNV	LPIN1:NM_145693:exon10:c.G1480A:p.V494M,LPIN1:NM_001261427:exon11:c.G1498A:p.V500M,LPIN1:NM_001261428:exon12:c.G1735A:p.V579M	exonic	ENSG00000134324	NA	nonsynonymous SNV	ENSG00000134324:ENST00000396097:exon6:c.G670A:p.V224M,ENSG00000134324:ENST00000256720:exon10:c.G1480A:p.V494M,ENSG00000134324:ENST00000425416:exon11:c.G1498A:p.V500M,ENSG00000134324:ENST00000396099:exon12:c.G1606A:p.V536M,ENSG00000134324:ENST00000449576:exon12:c.G1735A:p.V579M	Score=497;Name=lod=139	NA	2p25.1	NA	NA	NA	NA	rs33997857	0.01	0.01	0.009	0.0071885	0.0229	NA	0.013	0.0008	0.0031	0.02	NA	0.02	0.002	0.0157	0.022	0.02	D	0.947	P	0.847	P	0.020	N	1.000	D	1.83	L	-0.56	T	-0.257	T	0.310	T	0.225	4.18	21.6	5.57	2.630	4.249	19.553	4.179907	4.179907	0	0.022093	0.004993	NA	0.014	NA	14.2726404
256	2	74690378	74690378	C	T	exonic	MOGS	NA	nonsynonymous SNV	MOGS:NM_006302:exon3:c.G715A:p.D239N,MOGS:NM_001146158:exon4:c.G397A:p.D133N	exonic	ENSG00000115275	NA	nonsynonymous SNV	ENSG00000115275:ENST00000233616:exon3:c.G715A:p.D239N,ENSG00000115275:ENST00000414701:exon3:c.G358A:p.D120N,ENSG00000115275:ENST00000448666:exon4:c.G397A:p.D133N,ENSG00000115275:ENST00000452063:exon4:c.G397A:p.D133N	Score=500;Name=lod=144	NA	2p13.1	Score=881;Name=V$CREB_02	NA	NA	NA	rs1063588	0.49	0.49	0.51	0.51877	0.1581	0.8214	0.3127	0.8086	0.3323	0.15	0.82	0.26	0.79	0.2669	0.82	0.42	T	0.561	P	0.23	B	0.001	D	0.000	P	0.525	N	1.23	T	-1.077	T	0.000	T	0.068	1.983	12.59	4.85	2.504	0.994	13.347	1.983034	1.983034	0.75	0.13632	0.674012	NA	0.413	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000081381.1;CLNDSDB=.;CLNDSDBID=.	14.2720134
257	19	38673353	38673353	G	A	exonic	SIPA1L3	NA	nonsynonymous SNV	SIPA1L3:NM_015073:exon16:c.G4403A:p.R1468Q	exonic	ENSG00000105738	NA	nonsynonymous SNV	ENSG00000105738:ENST00000601054:exon2:c.G242A:p.R81Q,ENSG00000105738:ENST00000222345:exon16:c.G4403A:p.R1468Q	Score=300;Name=lod=22	NA	19q13.13	Score=906;Name=V$P300_01	NA	NA	NA	rs61729145	0.01	0.01	0.01	0.00778754	0.0268	0.001	0.0072	0.0023	0.0031	0.02	NA	0.01	0.0041	0.0178	0.029	0.37	T	0.972	D	0.25	B	0.240	N	0.667	D	0.205	N	-0.95	T	-0.787	T	0.073	T	0.195	2.69	14.95	5.39	2.515	3.634	13.642	2.689767	2.689767	0.06	0.028488	0.003404	NA	0.007	NA	14.2602454
257	5	149509446	149509446	C	T	exonic	PDGFRB	NA	nonsynonymous SNV	PDGFRB:NM_002609:exon10:c.G1453A:p.E485K	exonic	ENSG00000113721	NA	nonsynonymous SNV	ENSG00000113721:ENST00000261799:exon10:c.G1453A:p.E485K	Score=395;Name=lod=54	NA	5q32	NA	Name=E2F6_(H-50),Egr-1,ZNF263,E2F6,c-Myc,CTCF	Name=145	NA	rs41287110	0.02	0.02	0.02	0.0107827	0.0328	NA	0.0216	0.0015	0.0041	0.04	NA	0.03	0.0041	0.0187	0.04	0.38	T	0.126	B	0.034	B	0.001	N	0.952	D	0.69	N	-0.98	T	-0.921	T	0.063	T	0.191	2.214	13.36	3.73	2.409	1.826	12.511	2.214386	2.214386	0.47	0.026047	0.004766	NA	NA	NA	14.2557864
258	9	19290794	19290794	A	C	exonic	DENND4C	NA	nonsynonymous SNV	DENND4C:NM_017925:exon5:c.A721C:p.I241L	exonic	ENSG00000137145	NA	nonsynonymous SNV	ENSG00000137145:ENST00000380432:exon1:c.A13C:p.I5L,ENSG00000137145:ENST00000434457:exon5:c.A721C:p.I241L,ENSG00000137145:ENST00000602925:exon5:c.A721C:p.I241L	Score=676;Name=lod=748	NA	9p22.1	NA	NA	NA	NA	rs41269019	0.02	0.02	0.013	0.0115815	0.0338	NA	0.0274	0.0015	0.0031	0.03	NA	0.04	NA	0.0195	0.04	0.41	T	0.996	D	0.915	D	0.003	U	1.000	D	1.62	L	.	.	-0.871	T	0.093	T	0.7	4.716	26.2	5.44	2.287	6.109	15.656	4.716165	4.716165	0.01	0.029433	0.007069	NA	0.022	NA	14.2506004
258	11	6891758	6891758	A	C	exonic	OR10A2	NA	nonsynonymous SNV	OR10A2:NM_001004460:exon1:c.A773C:p.K258T	exonic	ENSG00000170790	NA	nonsynonymous SNV	ENSG00000170790:ENST00000307322:exon1:c.A773C:p.K258T	Score=361;Name=lod=39	NA	11p15.4	NA	NA	NA	NA	rs7926083	0.31	0.31	0.307	0.324481	0.3569	0.3135	0.3732	0.2073	0.4264	0.36	0.31	0.35	0.2	0.3533	0.37	0.01	D	0.999	D	0.993	D	0.001	D	0.791	P	0.805	L	8.71	T	-0.606	T	0.000	T	0.232	1.658	11.5	4.18	1.908	2.229	11.568	1.657657	1.657657	0.02	0.373021	0.201045	NA	0.268	NA	14.2501124
258	21	43505436	43505436	G	A	exonic	UMODL1	NA	nonsynonymous SNV	UMODL1:NM_001004416:exon4:c.G517A:p.V173I,UMODL1:NM_001199527:exon4:c.G301A:p.V101I,UMODL1:NM_001199528:exon4:c.G301A:p.V101I,UMODL1:NM_173568:exon4:c.G517A:p.V173I	exonic	ENSG00000177398	NA	nonsynonymous SNV	ENSG00000177398:ENST00000400424:exon4:c.G301A:p.V101I,ENSG00000177398:ENST00000400427:exon4:c.G301A:p.V101I,ENSG00000177398:ENST00000408910:exon4:c.G517A:p.V173I,ENSG00000177398:ENST00000408989:exon4:c.G517A:p.V173I	Score=369;Name=lod=42	NA	21q22.3	NA	NA	NA	NA	rs73371577	0.07	0.07	0.069	0.0609026	0.0258	0.1567	0.0432	0.028	0.0552	0.02	0.17	0.05	0.02	0.0434	0.17	0.01	D	1.0	D	0.966	D	0.002	N	0.567	P	2.045	M	-1.05	T	-0.919	T	0.003	T	0.133	3.408	17.51	3.01	0.926	2.780	9.273	3.407549	3.407549	0	0.018841	0.017969	NA	0.065	NA	14.2452924
259	15	43020983	43020983	G	A	exonic	CDAN1	NA	nonsynonymous SNV	CDAN1:NM_138477:exon20:c.C2671T:p.R891C	exonic	ENSG00000140326	NA	nonsynonymous SNV	ENSG00000140326:ENST00000562465:exon7:c.C664T:p.R222C,ENSG00000140326:ENST00000356231:exon20:c.C2671T:p.R891C	Score=493;Name=lod=134	NA	15q15.2	NA	NA	Name=3	NA	rs8023524	0.21	0.21	0.238	0.262979	0.1859	0.0496	0.1282	0.4924	0.3476	0.2	0.06	0.14	0.45	0.2158	0.45	0.05	D	0.993	D	0.491	P	0.457	N	0.164	P	1.39	L	-1.13	T	-0.995	T	0.000	T	0.172	3.65	18.56	3.79	1.447	0.862	8.391	3.650453	3.650453	0.01	0.188416	0.428053	NA	0.261	CLINSIG=non-pathogenic;CLNDBN=Congenital_dyserythropoietic_anemia\x2c_type_I;CLNREVSTAT=single;CLNACC=RCV000020955.1;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet:SNOMED_CT;CLNDSDBID=NBK5313:C0271933:224120:ORPHA98869:59548005	14.2432174
259	7	11871406	11871406	G	C	exonic	THSD7A	NA	nonsynonymous SNV	THSD7A:NM_015204:exon1:c.C167G:p.P56R	exonic	ENSG00000005108	NA	nonsynonymous SNV	ENSG00000005108:ENST00000423059:exon1:c.C167G:p.P56R	Score=415;Name=lod=65	NA	7p21.3	Score=917;Name=V$PAX4_03	Name=Rad21,CTCF,Pol2	Name=105	NA	rs140474426	0.02	0.02	0.008	0.019369	0.0209	0.001	0.0519	0.0008	0.0389	0.02	0.0017	0.06	0.002	0.0377	0.06	0.53	T	0.099	B	0.04	B	0.358	U	0.959	N	0.46	N	0.3	T	-1.098	T	0.019	T	0.28	1.235	10.02	4.79	2.482	4.202	13.112	1.235474	1.235474	0.6	0.033084	0.006801	ID=COSM1235712;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	NA	NA	14.2416494
259	12	109936056	109936056	T	C	exonic	UBE3B	NA	nonsynonymous SNV	UBE3B:NM_130466:exon11:c.T838C:p.S280P,UBE3B:NM_183415:exon11:c.T838C:p.S280P	exonic	ENSG00000151148	NA	nonsynonymous SNV	ENSG00000151148:ENST00000539599:exon10:c.T838C:p.S280P,ENSG00000151148:ENST00000280774:exon11:c.T838C:p.S280P,ENSG00000151148:ENST00000342494:exon11:c.T838C:p.S280P,ENSG00000151148:ENST00000434735:exon11:c.T838C:p.S280P,ENSG00000151148:ENST00000449510:exon11:c.T838C:p.S280P	Score=483;Name=lod=122	NA	12q24.11	NA	NA	Name=5	NA	rs61748069	0.02	0.02	0.015	0.0111821	0.0378	0.001	0.0058	0.0015	0.0112	0.05	NA	0.01	0.002	0.0247	0.05	0.01	D	0.232	B	0.229	B	0.001	N	1.000	D	1.59	L	1.42	T	-1.000	T	0.028	T	0.559	3.156	16.56	4.65	2.236	2.732	11.341	3.156228	3.156228	0.02	0.030465	0.007717	ID=COSM1178430;OCCURENCE=1(prostate)	NA	NA	14.2403684
259	17	6524298	6524298	T	A	exonic	KIAA0753	NA	nonsynonymous SNV	KIAA0753:NM_014804:exon7:c.A1125T:p.E375D	exonic	ENSG00000198920	NA	nonsynonymous SNV	ENSG00000198920:ENST00000542606:exon5:c.A228T:p.E76D,ENSG00000198920:ENST00000572370:exon6:c.A228T:p.E76D,ENSG00000198920:ENST00000361413:exon7:c.A1125T:p.E375D	Score=440;Name=lod=82	NA	17p13.1	NA	NA	NA	NA	rs9889363	0.31	0.31	0.291	0.307907	0.3489	0.3562	0.4006	0.1581	0.3528	0.34	0.31	0.43	0.17	0.3695	0.43	0.03	D	0.999	D	0.994	D	0.017	N	0.000	P	2.34	M	-2.19	D	-1.146	T	0.000	T	0.163	4.484	24	3.84	0.991	0.810	7.626	4.484199	4.484199	0.09	0.377206	0.202093	NA	0.261	NA	14.2377274
259	3	178968634	178968634	C	T	exonic	KCNMB3	NA	nonsynonymous SNV	KCNMB3:NM_171830:exon1:c.G145A:p.A49T,KCNMB3:NM_001163677:exon2:c.G151A:p.A51T,KCNMB3:NM_014407:exon2:c.G157A:p.A53T,KCNMB3:NM_171828:exon2:c.G151A:p.A51T,KCNMB3:NM_171829:exon2:c.G91A:p.A31T	exonic	ENSG00000171121	NA	nonsynonymous SNV	ENSG00000171121:ENST00000392685:exon1:c.G145A:p.A49T,ENSG00000171121:ENST00000314235:exon2:c.G157A:p.A53T,ENSG00000171121:ENST00000349697:exon2:c.G151A:p.A51T,ENSG00000171121:ENST00000392686:exon2:c.G91A:p.A31T,ENSG00000171121:ENST00000485523:exon2:c.G91A:p.A31T,ENSG00000171121:ENST00000497599:exon2:c.G151A:p.A51T	Score=466;Name=lod=104	NA	3q26.32	NA	NA	NA	NA	rs7645550	0.29	0.29	0.298	0.315296	0.3708	0.123	0.3127	0.416	0.3221	0.37	0.08	0.31	0.41	0.3456	0.41	0.17	T	1.0	D	0.996	D	0.000	D	0.004	P	2.34	M	2.89	T	-0.920	T	0.000	T	0.247	3.544	18.08	6.08	2.894	4.589	18.157	3.544434	3.544434	0.01	0.38186	0.388107	ID=COSM149519;OCCURENCE=1(stomach)	0.319	NA	14.2350734
260	17	10348354	10348354	T	C	exonic	MYH4	NA	nonsynonymous SNV	MYH4:NM_017533:exon37:c.A5405G:p.D1802G	exonic	ENSG00000264424	NA	nonsynonymous SNV	ENSG00000264424:ENST00000255381:exon37:c.A5405G:p.D1802G	Score=542;Name=lod=212	NA	17p13.1	NA	NA	NA	NA	rs2277649	0.45	0.45	0.431	0.454872	0.3181	0.8214	0.4755	0.233	0.5031	0.31	0.83	0.45	0.22	0.4282	0.83	0	D	0.993	D	0.969	D	0.002	U	0.000	P	3.62	H	-1.18	T	-0.909	T	0.000	T	0.348	3.809	19.34	5.5	2.214	6.257	15.887	3.809062	3.809062	NA	0.354651	0.258057	NA	0.522	NA	14.2323824
261	3	39228676	39228676	T	G	exonic	XIRP1	NA	nonsynonymous SNV	XIRP1:NM_001198621:exon2:c.A2261C:p.Q754P,XIRP1:NM_194293:exon2:c.A2261C:p.Q754P	exonic	ENSG00000168334	NA	nonsynonymous SNV	ENSG00000168334:ENST00000340369:exon2:c.A2261C:p.Q754P,ENSG00000168334:ENST00000396251:exon2:c.A2261C:p.Q754P	Score=346;Name=lod=34	NA	3p22.2	NA	NA	NA	NA	rs62244166	0.02	0.02	0.016	0.0201677	0.0507	0.001	0.0346	0.0045	0.0194	0.05	NA	0.04	0.0041	0.0316	0.05	0.11	T	0.997	D	0.942	D	0.001	N	1.000	D	2.08	M	3.71	T	-1.178	T	0.007	T	0.364	1.685	11.59	4.11	1.873	0.168	6.303	1.685117	1.685117	0.05	0.044186	0.008852	NA	0.087	NA	14.2068474
262	11	124180282	124180282	A	C	exonic	OR8D1	NA	nonsynonymous SNV	OR8D1:NM_001002917:exon1:c.T381G:p.C127W	exonic	ENSG00000196341	NA	nonsynonymous SNV	ENSG00000196341:ENST00000357821:exon1:c.T381G:p.C127W	NA	NA	11q24.2	Score=909;Name=V$TAL1BETAITF2_01	NA	Name=5	NA	rs7107539	0.32	0.32	0.282	0.267572	0.4066	0.4177	0.3372	0.0893	0.1616	0.39	0.42	0.36	0.07	0.3387	0.42	0.01	D	1.0	D	1.0	D	0.001	U	0.621	P	3.835	H	3.2	T	-0.998	T	0.000	T	0.281	2.67	14.89	-3.22	-0.868	-1.117	14.372	2.67023	2.67023	0	0.393231	0.140618	NA	0.188	NA	14.1948024
262	13	102220193	102220193	G	T	exonic	ITGBL1	NA	nonsynonymous SNV	ITGBL1:NM_001271754:exon2:c.G37T:p.A13S,ITGBL1:NM_001271756:exon2:c.G181T:p.A61S,ITGBL1:NM_004791:exon3:c.G460T:p.A154S	exonic	ENSG00000198542	NA	nonsynonymous SNV	ENSG00000198542:ENST00000376162:exon2:c.G181T:p.A61S,ENSG00000198542:ENST00000545560:exon2:c.G37T:p.A13S,ENSG00000198542:ENST00000376180:exon3:c.G460T:p.A154S	Score=489;Name=lod=129	NA	13q33.1	Score=916;Name=V$AREB6_01	NA	NA	NA	rs1140605	0.11	0.11	0.11	0.116014	0.0338	0.125	0.0692	0.2148	0.091	0.03	0.15	0.07	0.22	0.0698	0.22	0.03	D	0.165	B	0.056	B	0.000	N	0.000	P	0.915	L	-2.58	D	-0.998	T	0.001	T	0.106	2.719	15.05	4.58	1.417	3.744	14.133	2.718934	2.718934	0.07	0.043488	0.17635	NA	0.13	NA	14.1862454
262	10	102006625	102006625	G	A	exonic	CWF19L1	NA	nonsynonymous SNV	CWF19L1:NM_018294:exon8:c.C776T:p.P259L	exonic	ENSG00000095485	NA	nonsynonymous SNV	ENSG00000095485:ENST00000370379:exon1:c.C41T:p.P14L,ENSG00000095485:ENST00000354105:exon8:c.C776T:p.P259L	Score=626;Name=lod=467	NA	10q24.31	Score=941;Name=V$CETS1P54_01	NA	NA	NA	rs7073610	0.07	0.07	0.059	0.0800719	0.0487	0.0615	0.0519	0.1233	0.093	0.05	0.07	0.06	0.1	0.0526	0.1	0.34	T	0.066	B	0.01	B	0.000	D	0.000	P	1.445	L	1.57	T	-1.094	T	0.002	T	0.129	2.421	14.05	4.6	2.634	2.511	6.437	2.420734	2.420734	0.23	0.046279	0.095325	NA	0.051	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116860.2;CLNDSDB=.;CLNDSDBID=.	14.1857544
263	17	10355371	10355371	C	T	exonic	MYH4	NA	nonsynonymous SNV	MYH4:NM_017533:exon27:c.G3625A:p.E1209K	exonic	ENSG00000264424	NA	nonsynonymous SNV	ENSG00000264424:ENST00000255381:exon27:c.G3625A:p.E1209K	Score=612;Name=lod=409	NA	17p13.1	NA	NA	NA	NA	rs11651295	0.49	0.49	0.447	0.507987	0.334	0.8631	0.4841	0.3011	0.6176	0.34	0.87	0.47	0.3	0.4522	0.87	0	D	0.984	D	0.911	D	0.002	U	0.000	P	3.59	H	-1.38	T	-0.903	T	0.000	T	0.329	5.3	34	5.51	2.745	7.722	19.777	5.299995	5.299995	NA	0.363953	0.315706	NA	0.5	NA	14.1831804
263	1	205031116	205031116	C	T	exonic	CNTN2	NA	nonsynonymous SNV	CNTN2:NM_005076:exon9:c.C1097T:p.P366L	exonic	ENSG00000184144	NA	nonsynonymous SNV	ENSG00000184144:ENST00000331830:exon9:c.C1097T:p.P366L	Score=529;Name=lod=188	NA	1q32.1	Score=802;Name=V$ARP1_01	NA	NA	NA	rs2229866	0.5	0.5	0.446	0.551118	0.339	0.876	0.5591	0.323	0.7372	0.33	0.87	0.5	0.31	0.4754	0.87	0.03	D	0.029	B	0.023	B	0.000	D	0.000	P	2.04	M	-0.3	T	-0.957	T	0.000	T	0.222	4.055	20.8	4.94	2.284	4.643	17.744	4.055142	4.055142	0.42	0.343612	0.336058	NA	0.377	NA	14.1753214
264	13	97484830	97484830	A	G	exonic	HS6ST3	NA	nonsynonymous SNV	HS6ST3:NM_153456:exon2:c.A794G:p.K265R	exonic	ENSG00000185352	NA	nonsynonymous SNV	ENSG00000185352:ENST00000376705:exon2:c.A794G:p.K265R	Score=574;Name=lod=288	NA	13q32.1	NA	NA	NA	NA	rs9516771	0.03	0.03	0.021	0.0377396	0.0487	0.0208	0.0375	0.0038	0.09	0.05	0.01	0.04	0.01	0.0568	0.058	0.1	T	0.433	B	0.103	B	0.000	D	1.000	D	2.205	M	-0.9	T	-0.746	T	0.065	T	0.323	4.345	22.9	5.7	2.157	9.335	15.962	4.345489	4.345489	0.08	0.057907	0.014072	NA	0.029	NA	14.1699264
264	7	128363287	128363287	G	A	exonic	FAM71F1	NA	nonsynonymous SNV	FAM71F1:NM_032599:exon4:c.G724A:p.E242K	exonic	ENSG00000135248	NA	nonsynonymous SNV	ENSG00000135248:ENST00000466842:exon2:c.G292A:p.E98K,ENSG00000135248:ENST00000315184:exon4:c.G724A:p.E242K,ENSG00000135248:ENST00000471558:exon4:c.G724A:p.E242K,ENSG00000135248:ENST00000484425:exon5:c.G295A:p.E99K,ENSG00000135248:ENST00000485070:exon5:c.G427A:p.E143K	Score=537;Name=lod=203	NA	7q32.1	NA	NA	NA	NA	rs6971091	0.15	0.15	0.156	0.159545	0.2336	0.1052	0.1628	0.0598	0.272	0.24	0.12	0.15	0.07	0.2039	0.24	0.2	T	0.998	D	0.892	P	0.001	D	0.026	P	2.095	M	2.87	T	-1.144	T	0.000	T	0.22	3.748	19.03	5.2	2.868	4.046	14.431	3.748148	3.748148	0.05	0.229419	0.079664	NA	0.109	NA	14.1664144
265	16	3073240	3073240	G	T	exonic	HCFC1R1	NA	nonsynonymous SNV	HCFC1R1:NM_001002017:exon2:c.C218A:p.P73Q,HCFC1R1:NM_017885:exon3:c.C275A:p.P92Q,HCFC1R1:NM_001002018:exon4:c.C275A:p.P92Q	exonic	ENSG00000103145	NA	nonsynonymous SNV	ENSG00000103145:ENST00000354679:exon2:c.C269A:p.P90Q,ENSG00000103145:ENST00000574151:exon2:c.C218A:p.P73Q,ENSG00000103145:ENST00000248089:exon3:c.C275A:p.P92Q,ENSG00000103145:ENST00000572355:exon3:c.C155A:p.P52Q,ENSG00000103145:ENST00000396916:exon4:c.C275A:p.P92Q,ENSG00000103145:ENST00000573842:exon4:c.C275A:p.P92Q,ENSG00000103145:ENST00000574980:exon4:c.C275A:p.P92Q	Score=289;Name=lod=20	NA	16p13.3	Score=803;Name=V$ARP1_01	Name=Pol2-4H8,Pol2(phosphoS2),Pol2	Name=104	NA	rs10508	0.17	0.17	0.141	0.189097	0.2356	0.1181	0.1916	0.1354	0.2853	0.23	0.1	0.21	0.11	0.224	0.23	0.09	T	0.571	P	0.183	B	0.667	N	0.013	P	0.55	N	0.91	T	-1.048	T	0.000	T	0.269	1.228	9.981	3.14	1.172	2.458	7.493	1.228065	NA	0.13	0.229767	0.137853	ID=COSM1478796,COSM435123;OCCURENCE=1(breast)	0.232	NA	14.1439664
265	2	39088323	39088323	G	A	exonic	DHX57	NA	nonsynonymous SNV	DHX57:NM_198963:exon5:c.C1229T:p.S410F	exonic	ENSG00000163214	NA	nonsynonymous SNV	ENSG00000163214:ENST00000457308:exon4:c.C923T:p.S308F,ENSG00000163214:ENST00000295373:exon5:c.C1229T:p.S410F	Score=512;Name=lod=161	NA	2p22.1	NA	NA	NA	NA	rs11893062	0.03	0.03	0.024	0.0233626	0.0765	NA	0.0447	0.0045	0.0031	0.07	NA	0.04	0.01	0.0478	0.07	0.08	T	0.998	D	0.968	D	0.002	N	1.000	D	1.385	L	1.82	T	-1.192	T	0.014	T	0.322	4.261	22.2	5.67	2.677	7.637	19.773	4.260554	4.260554	0	0.068488	0.013618	NA	0.036	NA	14.1405454
265	11	116655600	116655600	G	A	exonic	ZNF259	NA	nonsynonymous SNV	ZNF259:NM_003904:exon8:c.C791T:p.A264V	exonic	ENSG00000109917	NA	nonsynonymous SNV	ENSG00000109917:ENST00000449430:exon4:c.C257T:p.A86V,ENSG00000109917:ENST00000227322:exon8:c.C791T:p.A264V	Score=456;Name=lod=95	NA	11q23.3	Score=915;Name=V$CHOP_01	NA	NA	NA	rs35120633	0.04	0.04	0.03	0.0467252	0.0666	NA	0.1153	0.0333	0.044	0.06	NA	0.09	0.03	0.0615	0.09	0.15	T	0.134	B	0.046	B	0.000	D	1.000	D	1.715	L	0.91	T	-1.101	T	0.016	T	0.224	3.158	16.56	5.92	2.795	6.269	13.500	3.157904	3.157904	0.14	0.064711	0.029532	NA	0.036	NA	14.1405224
265	11	32955122	32955122	A	G	exonic	QSER1	NA	nonsynonymous SNV	QSER1:NM_001076786:exon4:c.A1931G:p.Q644R	exonic	ENSG00000060749	NA	nonsynonymous SNV	ENSG00000060749:ENST00000399302:exon4:c.A1931G:p.Q644R,ENSG00000060749:ENST00000527788:exon5:c.A1214G:p.Q405R	Score=395;Name=lod=54	NA	11p13	NA	NA	NA	NA	rs2297781	0.07	0.07	0.05	0.0788738	0.0577	0.0595	0.0778	0.0772	0.1237	0.06	0.07	0.07	0.07	0.0726	0.087	0.01	D	0.996	D	0.986	D	0.000	D	0.008	P	1.04	L	2.2	T	-1.031	T	0.010	T	0.347	2.317	13.71	3.83	0.815	5.632	11.828	2.317458	2.317458	0	0.064496	0.072732	ID=COSM147173;OCCURENCE=1(stomach)	0.058	NA	14.1385374
265	19	44376937	44376937	G	A	exonic	ZNF404	NA	nonsynonymous SNV	ZNF404:NM_001033719:exon2:c.C1420T:p.R474C	exonic	ENSG00000176222	NA	nonsynonymous SNV	ENSG00000176222:ENST00000324394:exon2:c.C1423T:p.R475C,ENSG00000176222:ENST00000587539:exon3:c.C1429T:p.R477C	NA	NA	19q13.31	NA	Name=KAP1,SETDB1,p300_(N-15)	Name=13	NA	rs76311065	0.03	0.03	0.028	0.0223642	0.0805	0.001	0.0259	0.0045	0.0061	0.08	0.0017	0.02	0.0041	0.0495	0.08	0.05	D	0.999	D	0.918	D	.	.	1.000	N	1.36	L	3.19	T	-1.071	T	0.002	T	0.446	0.023	4.133	-3.98	-0.530	-2.781	5.372	0.023005	NA	0.03	0.065489	0.009553	NA	0.007	NA	14.1378444
266	22	46643023	46643023	A	C	exonic	CDPF1	NA	nonsynonymous SNV	CDPF1:NM_207327:exon3:c.T209G:p.L70R	exonic	ENSG00000205643	NA	nonsynonymous SNV	ENSG00000205643:ENST00000404583:exon2:c.T209G:p.L70R,ENSG00000205643:ENST00000404744:exon2:c.T209G:p.L70R,ENSG00000205643:ENST00000314567:exon3:c.T209G:p.L70R,ENSG00000205643:ENST00000381037:exon3:c.T209G:p.L70R	Score=454;Name=lod=93	NA	22q13.31	Score=829;Name=V$AHRARNT_02	NA	NA	NA	rs55641018	0.09	0.09	0.092	0.106629	0.0696	NA	0.0519	0.295	0.0389	0.06	NA	0.06	0.27	0.0709	0.27	0.46	T	0.998	D	0.944	D	0.051	N	0.940	P	1.175	L	0.93	T	-1.020	T	0.000	T	0.461	0.733	7.895	4.28	1.998	1.072	5.964	0.733169	NA	0.58	0.06314	0.246482	NA	0.181	NA	14.1296934
266	12	30906358	30906358	G	A	exonic	CAPRIN2	NA	nonsynonymous SNV	CAPRIN2:NM_001002259:exon1:c.C340T:p.P114S,CAPRIN2:NM_001206856:exon1:c.C340T:p.P114S,CAPRIN2:NM_023925:exon1:c.C340T:p.P114S,CAPRIN2:NM_032156:exon1:c.C340T:p.P114S	exonic	ENSG00000110888	NA	nonsynonymous SNV	ENSG00000110888:ENST00000251071:exon1:c.C340T:p.P114S,ENSG00000110888:ENST00000298892:exon1:c.C340T:p.P114S,ENSG00000110888:ENST00000395805:exon1:c.C340T:p.P114S,ENSG00000110888:ENST00000417045:exon1:c.C340T:p.P114S,ENSG00000110888:ENST00000454014:exon1:c.C340T:p.P114S,ENSG00000110888:ENST00000537108:exon2:c.C97T:p.P33S,ENSG00000110888:ENST00000540436:exon2:c.C97T:p.P33S,ENSG00000110888:ENST00000540584:exon2:c.C97T:p.P33S,ENSG00000110888:ENST00000542550:exon2:c.C97T:p.P33S	Score=602;Name=lod=373	NA	12p11.21	NA	Name=CTCF_(SC-5916),KAP1,CTCF_(C-20),SMC3_(ab9263),CTCF,Rad21	Name=126	NA	rs17688567	0.04	0.04	0.029	0.0375399	0.0746	0.003	0.072	0.0045	0.0552	0.07	0.01	0.07	0.01	0.0559	0.073	0.17	T	0.136	B	0.05	B	0.008	N	1.000	D	0.145	N	1.88	T	-1.054	T	0.003	T	0.202	1.895	12.29	4.29	2.520	2.359	10.657	1.894903	1.894903	0.06	0.073372	0.011575	NA	0.051	NA	14.1294614
266	6	18122506	18122506	G	A	exonic	NHLRC1	NA	nonsynonymous SNV	NHLRC1:NM_198586:exon1:c.C332T:p.P111L	exonic	ENSG00000187566	NA	nonsynonymous SNV	ENSG00000187566:ENST00000340650:exon1:c.C332T:p.P111L	NA	NA	6p22.3	NA	NA	NA	NA	rs10949483	0.37	0.37	0.302	0.342851	0.3996	0.3869	0.4914	0.2042	0.3211	0.41	0.41	0.44	0.2	0.4211	0.44	0.19	T	0.164	B	0.04	B	0.001	D	0.930	P	1.87	L	-4.18	D	0.499	D	0.769	D	0.16	2.814	15.37	5.23	2.418	1.492	17.581	2.813953	2.813953	0.02	0.385015	0.243062	NA	0.21	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000117782.1|RCV000127205.1;CLNDSDB=.|.;CLNDSDBID=.|.	14.1276184
267	7	150554553	150554553	C	T	exonic	ABP1	NA	nonsynonymous SNV	ABP1:NM_001091:exon2:c.C995T:p.S332F,ABP1:NM_001272072:exon2:c.C995T:p.S332F	exonic	ENSG00000002726	NA	nonsynonymous SNV	ENSG00000002726:ENST00000360937:exon2:c.C995T:p.S332F,ENSG00000002726:ENST00000416793:exon2:c.C995T:p.S332F,ENSG00000002726:ENST00000483043:exon3:c.C995T:p.S332F,ENSG00000002726:ENST00000467291:exon4:c.C995T:p.S332F,ENSG00000002726:ENST00000493429:exon4:c.C995T:p.S332F	NA	NA	7q36.1	NA	NA	NA	NA	rs1049742	0.06	0.06	0.042	0.053115	0.0785	0.002	0.0605	0.0877	0.0276	0.08	NA	0.07	0.09	0.0602	0.09	0.01	D	0.991	D	0.973	D	0.015	N	1.000	N	2.89	M	3.68	T	-1.234	T	0.003	T	0.343	3.312	17.14	4.96	2.735	2.255	16.083	3.312468	3.312468	0	0.073755	0.086136	NA	0.174	NA	14.1208784
267	14	23504021	23504021	G	A	exonic	PSMB5	NA	nonsynonymous SNV	PSMB5:NM_001144932:exon1:c.C70T:p.R24C,PSMB5:NM_002797:exon1:c.C70T:p.R24C	exonic	ENSG00000100804	NA	nonsynonymous SNV	ENSG00000100804:ENST00000334454:exon1:c.C70T:p.R24C,ENSG00000100804:ENST00000361611:exon1:c.C70T:p.R24C,ENSG00000100804:ENST00000460922:exon1:c.C70T:p.R24C,ENSG00000100804:ENST00000493471:exon1:c.C70T:p.R24C	Score=461;Name=lod=100	NA	14q11.2	NA	Name=Oct-2,TAF7_(SQ-8),YY1_(C-20),TR4,Pol2,Pol2(phosphoS2),POU2F2,TAF1,TBP,THAP1_(SC-98174),c-Myc,HEY1,NFKB,Sin3Ak-20,Pol2-4H8,KAP1,YY1,Pol2(b)	Name=148	NA	rs11543947	0.03	0.03	0.022	0.0359425	0.0626	0.001	0.0288	0.0234	0.0665	0.06	0.0017	0.03	0.02	0.0677	0.083	0.04	D	0.007	B	0.003	B	0.048	N	1.000	D	0.55	N	0.72	T	-1.098	T	0.005	T	0.201	2.825	15.41	3.37	0.570	1.316	4.426	2.824549	2.824549	0.01	0.082674	0.038357	NA	0.007	NA	14.1203594
268	2	230861519	230861519	G	T	exonic	FBXO36	NA	nonsynonymous SNV	FBXO36:NM_174899:exon3:c.G258T:p.L86F	exonic	ENSG00000153832	NA	nonsynonymous SNV	ENSG00000153832:ENST00000283946:exon3:c.G258T:p.L86F,ENSG00000153832:ENST00000373652:exon4:c.G165T:p.L55F	Score=358;Name=lod=38	NA	2q36.3	Score=797;Name=V$OCT1_04	Name=MafK_(ab50322)	NA	NA	rs1035834	0.21	0.21	0.186	0.179712	0.2654	0.1042	0.268	0.1959	0.0849	0.27	0.11	0.29	0.2	0.213	0.29	0.05	D	0.987	D	0.864	P	0.000	D	0.000	P	2.555	M	0.44	T	-1.060	T	0.000	T	0.187	2.254	13.49	0.962	0.125	0.765	12.425	2.254163	2.254163	0.04	0.24	0.18906	ID=COSM149087;OCCURENCE=1(stomach)	0.13	NA	14.1149334
268	17	62496670	62496670	A	C	exonic	DDX5	NA	nonsynonymous SNV	DDX5:NM_004396:exon12:c.T1438G:p.S480A	exonic	ENSG00000108654	NA	nonsynonymous SNV	ENSG00000108654:ENST00000450599:exon11:c.T1201G:p.S401A,ENSG00000108654:ENST00000225792:exon12:c.T1438G:p.S480A,ENSG00000108654:ENST00000578804:exon12:c.T1438G:p.S480A	Score=625;Name=lod=464	NA	17q23.3	NA	Name=Pol2-4H8,Pol2(b),Pol2	Name=15	NA	rs1140409	0.04	0.04	0.04	0.0291534	0.0835	NA	0.0461	0.003	0.0266	0.09	NA	0.05	0.01	0.0644	0.09	0.47	T	0.024	B	0.01	B	0.010	N	0.943	D	0.895	L	.	.	-1.097	T	0.006	T	0.147	0.094	4.506	4.64	1.096	4.358	7.547	0.093795	NA	0.67	0.071512	0.011575	NA	0.022	NA	14.1139214
269	20	21494184	21494184	C	T	exonic	NKX2-2	NA	nonsynonymous SNV	NKX2-2:NM_002509:exon1:c.G124A:p.A42T	exonic	ENSG00000125820	NA	nonsynonymous SNV	ENSG00000125820:ENST00000377142:exon1:c.G124A:p.A42T	Score=583;Name=lod=313	NA	20p11.22	Score=843;Name=V$YY1_02	Name=SUZ12	Name=9	NA	rs8192562	0.04	0.04	0.023	0.0299521	0.0944	NA	0.0418	0.003	0.0225	0.08	NA	0.06	0.01	0.056	0.08	0.59	T	0.0	B	0.001	B	0.013	N	0.765	N	-0.895	N	-2.71	D	-0.908	T	0.026	T	0.011	1.228	9.981	1.46	1.050	1.396	4.556	1.228068	NA	0.36	0.078953	0.014753	NA	0.014	NA	14.1039804
269	1	6705944	6705944	C	T	exonic	DNAJC11	NA	nonsynonymous SNV	DNAJC11:NM_018198:exon8:c.G799A:p.V267M	exonic	ENSG00000007923	NA	nonsynonymous SNV	ENSG00000007923:ENST00000349363:exon7:c.G685A:p.V229M,ENSG00000007923:ENST00000377573:exon7:c.G529A:p.V177M,ENSG00000007923:ENST00000451196:exon7:c.G727A:p.V243M,ENSG00000007923:ENST00000294401:exon8:c.G799A:p.V267M,ENSG00000007923:ENST00000377577:exon8:c.G799A:p.V267M,ENSG00000007923:ENST00000426784:exon8:c.G889A:p.V297M,ENSG00000007923:ENST00000542246:exon8:c.G685A:p.V229M	Score=502;Name=lod=146	NA	1p36.31	NA	Name=ZNF263	NA	NA	rs12137794	0.04	0.04	0.022	0.0441294	0.0795	NA	0.1282	0.0038	0.0481	0.08	NA	0.07	0.0041	0.0692	0.082	0.42	T	0.222	B	0.019	B	0.000	D	0.996	D	-0.345	N	2.53	T	-0.999	T	0.002	T	0.218	2.073	12.89	4.25	2.472	5.648	3.838	2.072584	2.072584	0.32	0.082326	0.017022	NA	0.022	NA	14.1023074
270	10	29784072	29784072	G	C	exonic	SVIL	NA	nonsynonymous SNV	SVIL:NM_003174:exon17:c.C2425G:p.P809A,SVIL:NM_021738:exon19:c.C3703G:p.P1235A	exonic	ENSG00000197321	NA	nonsynonymous SNV	ENSG00000197321:ENST00000538146:exon2:c.C79G:p.P27A,ENSG00000197321:ENST00000535393:exon5:c.C445G:p.P149A,ENSG00000197321:ENST00000375400:exon17:c.C2425G:p.P809A,ENSG00000197321:ENST00000355867:exon19:c.C3703G:p.P1235A,ENSG00000197321:ENST00000375398:exon21:c.C3703G:p.P1235A	Score=317;Name=lod=26	NA	10p11.23	NA	NA	NA	NA	rs2368406	0.64	0.64	0.655	NA	NA	NA	NA	NA	NA	0.7	0.53	0.66	0.68	0.751	0.7	0.1	T	0.968	D	0.853	P	0.000	D	0.000	P	2.215	M	2.69	T	-0.976	T	0.000	T	0.523	4.03	20.7	4.37	2.267	6.346	17.153	4.030226	4.030226	0.07	NA	NA	ID=COSM1599890;OCCURENCE=1(central_nervous_system)	0.725	NA	14.0823334
270	1	19635011	19635011	C	T	exonic	AKR7A2	NA	nonsynonymous SNV	AKR7A2:NM_003689:exon2:c.G424A:p.A142T	exonic	ENSG00000053371	NA	nonsynonymous SNV	ENSG00000053371:ENST00000235835:exon2:c.G424A:p.A142T,ENSG00000053371:ENST00000330072:exon2:c.G394A:p.A132T	NA	NA	1p36.13	Score=853;Name=V$AHRARNT_01	NA	NA	NA	rs1043657	0.05	0.05	0.047	0.0375399	0.0974	0.003	0.0605	0.0257	0.0112	0.1	NA	0.07	0.02	0.0639	0.1	0.02	D	0.999	D	0.952	D	0.000	D	1.000	P	2.02	M	3.66	T	-1.098	T	0.001	T	0.331	1.272	10.15	0.911	0.384	2.267	5.664	1.272395	1.272395	0.01	0.093721	0.030867	NA	0.022	NA	14.0783124
270	2	98277090	98277090	T	C	exonic	ACTR1B	NA	nonsynonymous SNV	ACTR1B:NM_005735:exon3:c.A133G:p.M45V	exonic	ENSG00000115073	NA	nonsynonymous SNV	ENSG00000115073:ENST00000289228:exon3:c.A133G:p.M45V	Score=579;Name=lod=302	NA	2q11.2	NA	NA	Name=5	NA	rs79616802	0.12	0.12	0.131	0.133187	0.0885	0.0159	0.0965	0.3517	0.0307	0.09	0.02	0.11	0.3	0.0847	0.3	0.29	T	0.0	B	0.0	B	0.000	D	0.035	P	-1.84	N	-4.2	D	-0.975	T	0.000	T	0.068	0.569	7.077	4.33	2.094	2.574	8.862	0.569383	NA	0.64	0.082558	0.288243	NA	0.13	NA	14.0775754
271	1	17593316	17593316	G	A	exonic	PADI3	NA	nonsynonymous SNV	PADI3:NM_016233:exon5:c.G511A:p.V171M	exonic	ENSG00000142619	NA	nonsynonymous SNV	ENSG00000142619:ENST00000375460:exon5:c.G511A:p.V171M	Score=395;Name=lod=54	NA	1p36.13	NA	NA	NA	NA	rs2272629	0.1	0.1	0.082	0.119808	0.0875	0.1508	0.1239	0.0287	0.2413	0.08	0.15	0.13	0.04	0.1009	0.15	0.11	T	0.999	D	0.921	D	0.008	N	0.481	P	2.12	M	2.01	T	-1.094	T	0.001	T	0.133	1.701	11.65	3.94	1.176	1.770	9.398	1.701419	1.701419	0.1	0.08	0.033364	NA	0.087	NA	14.0649334
271	15	52903772	52903772	T	C	exonic	FAM214A	NA	nonsynonymous SNV	FAM214A:NM_019600:exon4:c.A404G:p.Q135R	exonic	ENSG00000047346	NA	nonsynonymous SNV	ENSG00000047346:ENST00000399202:exon3:c.A140G:p.Q47R,ENSG00000047346:ENST00000546305:exon3:c.A425G:p.Q142R,ENSG00000047346:ENST00000261844:exon4:c.A404G:p.Q135R,ENSG00000047346:ENST00000534964:exon4:c.A404G:p.Q135R,ENSG00000047346:ENST00000562135:exon4:c.A404G:p.Q135R	Score=562;Name=lod=256	NA	15q21.3	NA	NA	NA	NA	rs8036680	0.07	0.07	0.074	0.0780751	0.0865	0.001	0.0706	0.1377	0.0736	0.09	NA	0.09	0.13	0.0889	0.13	.	.	0.999	D	0.995	D	0.000	D	0.000	P	1.155	L	1.42	T	-1.186	T	0.002	T	0.775	4.958	28.9	6.16	2.367	5.981	16.806	4.958215	4.958215	0.1	0.098097	0.125948	NA	0.08	NA	14.0598364
271	1	118565953	118565953	G	A	exonic	SPAG17	NA	nonsynonymous SNV	SPAG17:NM_206996:exon28:c.C4043T:p.P1348L	exonic	ENSG00000155761	NA	nonsynonymous SNV	ENSG00000155761:ENST00000336338:exon28:c.C4043T:p.P1348L	NA	NA	1p12	NA	Name=Rad21,CTCF	NA	NA	rs10923472	0.29	0.29	0.249	0.28734	0.4314	0.1567	0.4107	0.1551	0.365	0.44	0.12	0.43	0.15	0.3948	0.45	0.01	D	1.0	D	0.998	D	0.030	N	0.226	P	2.045	M	2.07	T	-1.040	T	0.099	T	0.248	3.567	18.18	5.63	2.669	2.084	15.189	3.566922	3.566922	0	0.448488	0.203586	NA	0.377	NA	14.0586454
272	1	9009451	9009451	G	C	exonic	CA6	NA	nonsynonymous SNV	CA6:NM_001215:exon2:c.G209C:p.G70A,CA6:NM_001270500:exon2:c.G209C:p.G70A	exonic	ENSG00000131686	NA	nonsynonymous SNV	ENSG00000131686:ENST00000319474:exon2:c.G209C:p.G70A,ENSG00000131686:ENST00000377436:exon2:c.G209C:p.G70A,ENSG00000131686:ENST00000377443:exon2:c.G209C:p.G70A,ENSG00000131686:ENST00000480186:exon2:c.G209C:p.G70A	Score=289;Name=lod=20	NA	1p36.23	NA	NA	NA	NA	rs2274329	0.09	0.09	0.077	0.0946486	0.1054	0.1647	0.0461	0.0053	0.1667	0.11	0.17	0.05	0.01	0.0924	0.17	.	.	1.0	D	0.987	D	0.009	N	0.000	P	2.24	M	0.57	T	-0.965	T	0.002	T	0.174	3.472	17.77	3.39	1.348	4.333	8.018	3.471661	3.471661	0	0.095349	0.020881	NA	0.072	NA	14.0401844
272	6	31112484	31112484	C	T	exonic	CCHCR1	NA	nonsynonymous SNV	CCHCR1:NM_001105563:exon15:c.G2039A:p.R680Q,CCHCR1:NM_001105564:exon15:c.G2147A:p.R716Q,CCHCR1:NM_019052:exon15:c.G1880A:p.R627Q	exonic	ENSG00000204536	NA	nonsynonymous SNV	ENSG00000204536:ENST00000396263:exon13:c.G1721A:p.R574Q,ENSG00000204536:ENST00000376266:exon15:c.G1880A:p.R627Q,ENSG00000204536:ENST00000396268:exon15:c.G2147A:p.R716Q,ENSG00000204536:ENST00000451521:exon15:c.G2039A:p.R680Q	Score=381;Name=lod=47	NA	6p21.33	NA	NA	NA	NA	rs130072	0.09	0.09	0.074	0.0784744	0.1123	0.0347	0.1369	0.0567	0.0767	0.12	0.04	0.15	0.05	0.099	0.15	0.22	T	1.0	D	0.998	D	0.005	N	0.390	P	2.28	M	3.26	T	-1.099	T	0.034	T	0.368	4.346	22.9	4.2	1.144	2.178	9.343	4.346238	4.346238	0	0.086744	0.053109	NA	0.043	NA	14.0352894
273	12	58015494	58015494	G	A	exonic	SLC26A10	NA	nonsynonymous SNV	SLC26A10:NM_133489:exon4:c.G577A:p.A193T	exonic	ENSG00000135502	NA	nonsynonymous SNV	ENSG00000135502:ENST00000320442:exon4:c.G577A:p.A193T,ENSG00000135502:ENST00000379218:exon4:c.G577A:p.A193T,ENSG00000135502:ENST00000474359:exon5:c.G799A:p.A267T	Score=435;Name=lod=78	NA	12q13.3	NA	Name=CTCF,E2F6,Pol2,HMGN3	Name=85	NA	rs923828	0.29	0.29	0.275	0.265176	0.4374	0.2778	0.3242	0.1399	0.2025	0.41	0.21	0.37	0.14	0.4373	0.43	0.25	T	0.734	P	0.501	P	.	.	0.737	P	0.975	L	-2.99	D	-1.169	T	0.000	T	0.195	3.441	17.65	3.89	2.197	4.390	11.585	3.441194	3.441194	0.45	0.434008	0.186078	NA	0.29	NA	14.0246254
273	12	56494998	56494998	A	T	exonic	ERBB3	NA	nonsynonymous SNV	ERBB3:NM_001982:exon27:c.A3355T:p.S1119C	exonic	ENSG00000065361	NA	nonsynonymous SNV	ENSG00000065361:ENST00000549832:exon5:c.A715T:p.S239C,ENSG00000065361:ENST00000553131:exon10:c.A1078T:p.S360C,ENSG00000065361:ENST00000550070:exon12:c.A1276T:p.S426C,ENSG00000065361:ENST00000450146:exon14:c.A1426T:p.S476C,ENSG00000065361:ENST00000267101:exon27:c.A3355T:p.S1119C,ENSG00000065361:ENST00000415288:exon28:c.A3178T:p.S1060C	Score=432;Name=lod=76	NA	12q13.2	NA	NA	NA	NA	rs773123	0.06	0.06	0.058	0.0664936	0.1123	0.002	0.0663	0.0787	0.0695	0.11	0.0017	0.07	0.05	0.0908	0.11	0.07	T	1.0	D	0.998	D	0.000	D	0.000	P	0	N	-1.06	T	-0.609	T	0.018	T	0.715	4.127	21.3	5.87	2.371	6.234	14.096	4.12679	4.12679	0.01	0.106512	0.087154	NA	0.101	NA	14.0237214
273	1	89479063	89479063	G	A	exonic	GBP3	NA	nonsynonymous SNV	GBP3:NM_018284:exon6:c.C673T:p.R225W	exonic	ENSG00000117226	NA	nonsynonymous SNV	ENSG00000117226:ENST00000370481:exon6:c.C673T:p.R225W,ENSG00000117226:ENST00000489444:exon6:c.C673T:p.R225W	Score=391;Name=lod=52	NA	1p22.2	NA	NA	NA	NA	rs4656077	0.32	0.32	0.288	0.333666	0.4404	0.3075	0.2925	0.1793	0.4888	0.45	0.28	0.34	0.16	0.4172	0.45	.	.	1.0	D	0.99	D	0.006	N	1.000	P	3.63	H	-1.13	T	0.418	D	0.631	D	0.176	3.3	17.09	2.92	0.940	2.438	10.834	3.299634	3.299634	0.01	0.453721	0.261008	NA	0.246	NA	14.0220124
273	16	53481010	53481010	A	G	exonic	RBL2	NA	nonsynonymous SNV	RBL2:NM_005611:exon4:c.A629G:p.Y210C	exonic	ENSG00000103479	NA	nonsynonymous SNV	ENSG00000103479:ENST00000262133:exon4:c.A629G:p.Y210C,ENSG00000103479:ENST00000544405:exon4:c.A407G:p.Y136C,ENSG00000103479:ENST00000567964:exon4:c.A236G:p.Y79C	Score=590;Name=lod=332	NA	16q12.2	Score=819;Name=V$OCT1_04	NA	NA	NA	rs17800727	0.14	0.14	0.127	0.108027	0.2883	0.001	0.2075	0.0189	0.0828	0.28	0.0017	0.22	0.03	0.2157	0.31	0.19	T	0.997	D	0.87	P	0.000	D	0.000	P	0.16	N	-0.71	T	-1.058	T	0.000	T	0.603	3.289	17.05	5.38	2.047	5.903	15.388	3.289226	3.289226	0.15	0.307791	0.053027	NA	0.21	NA	14.0215424
273	21	32253513	32253513	A	T	exonic	KRTAP11-1	NA	nonsynonymous SNV	KRTAP11-1:NM_175858:exon1:c.T331A:p.C111S	exonic	ENSG00000182591	NA	nonsynonymous SNV	ENSG00000182591:ENST00000332378:exon1:c.T331A:p.C111S	Score=349;Name=lod=35	NA	21q22.11	NA	NA	NA	NA	rs9636845	0.18	0.18	0.161	0.17492	0.0885	0.4663	0.2032	0.0045	0.1738	0.09	0.43	0.2	0.01	0.1356	0.43	0.08	T	1.0	D	0.999	D	0.013	N	0.002	P	2.445	M	3.61	T	-0.877	T	0.000	T	0.316	2.992	15.98	5.4	2.197	4.106	13.723	2.992318	2.992318	NA	0.08907	0.02542	NA	0.254	NA	14.0201634
273	13	23907909	23907909	A	G	exonic	SACS	NA	nonsynonymous SNV	SACS:NM_014363:exon10:c.T10106C:p.V3369A	exonic	ENSG00000151835	NA	nonsynonymous SNV	ENSG00000151835:ENST00000402364:exon8:c.T7856C:p.V2619A,ENSG00000151835:ENST00000382292:exon9:c.T10106C:p.V3369A,ENSG00000151835:ENST00000382298:exon10:c.T10106C:p.V3369A	Score=462;Name=lod=101	NA	13q12.12	NA	NA	NA	NA	rs17078605	0.27	0.27	0.22	0.258986	0.2783	0.3145	0.3617	0.0552	0.3845	0.28	0.36	0.36	0.07	0.2778	0.36	0.12	T	0.745	P	0.251	B	0.000	D	0.062	P	0.55	N	-2.19	D	-1.113	T	0.000	T	0.267	3.1	16.35	5.94	2.279	9.339	16.398	3.099588	3.099588	0.02	0.26006	0.096232	NA	0.152	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118228.2;CLNDSDB=.;CLNDSDBID=.	14.0171734
273	14	39650924	39650924	A	G	exonic	PNN	NA	nonsynonymous SNV	PNN:NM_002687:exon9:c.A2011G:p.S671G	exonic	ENSG00000100941	NA	nonsynonymous SNV	ENSG00000100941:ENST00000216832:exon9:c.A2011G:p.S671G	Score=733;Name=lod=1267	NA	14q21.1	NA	Name=HEY1,Pol2(b)	NA	NA	rs13021	0.15	0.15	0.151	0.125998	0.1024	0.3145	0.0591	0.0696	0.0798	0.11	0.34	0.07	0.07	0.1066	0.34	0.08	T	0.924	P	0.827	P	0.000	D	0.000	P	0.425	N	2.53	T	-0.902	T	0.000	T	0.213	1.518	11.03	4.74	2.364	5.380	10.986	1.518375	1.518375	0.04	0.109302	0.075579	NA	0.043	NA	14.0150314
274	12	129559421	129559421	C	T	exonic	TMEM132D	NA	nonsynonymous SNV	TMEM132D:NM_133448:exon9:c.G2299A:p.V767I	exonic	ENSG00000151952	NA	nonsynonymous SNV	ENSG00000151952:ENST00000389441:exon4:c.G913A:p.V305I,ENSG00000151952:ENST00000422113:exon9:c.G2299A:p.V767I	Score=460;Name=lod=99	NA	12q24.33	Score=794;Name=V$ER_Q6	NA	NA	NA	rs73159540	0.09	0.09	0.08	0.0826677	0.1173	0.1161	0.0778	0.0045	0.1217	0.12	0.11	0.09	0.01	0.0975	0.12	.	.	0.936	P	0.797	P	0.000	D	0.000	P	0.48	N	2.54	T	-0.972	T	0.001	T	0.115	1.066	9.353	4.2	2.033	2.480	16.884	1.066018	NA	0.53	0.107791	0.019973	NA	0.087	NA	14.0107424
275	14	96730313	96730313	G	A	exonic	BDKRB1	NA	stopgain	BDKRB1:NM_000710:exon3:c.G294A:p.W98X	exonic	ENSG00000100739	NA	stopgain	ENSG00000100739:ENST00000216629:exon3:c.G294A:p.W98X,ENSG00000100739:ENST00000553356:exon3:c.G294A:p.W98X	NA	NA	14q32.2	Score=837;Name=V$GRE_C	Name=HA-E2F1,c-Myc	Name=4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.1	T	.	.	.	.	0.784	U	1.000	A	.	.	.	.	.	.	.	.	.	4.949	28.8	3.49	0.616	-0.154	6.591	4.948566	4.948566	0.57	NA	NA	NA	NA	NA	14
275	1	145606274	145606274	C	T	splicing	POLR3C	NM_006468:exon6:c.678+1G>A	NA	NA	splicing	ENSG00000186141	ENST00000334163:exon6:c.678+1G>A,ENST00000369294:exon6:c.678+1G>A	NA	NA	Score=355;Name=lod=37	NA	1q21.1	NA	Name=GATA-1	Name=3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00005772	NA	.	.	.	.	.	.	.	.	1.000	D	.	.	.	.	.	.	.	.	.	3.79	19.24	4.96	1.485	4.254	10.815	3.79044	3.79044	NA	NA	NA	NA	NA	NA	13.9999423
275	9	108366734	108366734	G	A	exonic	FKTN	NA	nonsynonymous SNV	FKTN:NM_006731:exon5:c.G608A:p.R203Q,FKTN:NM_001079802:exon6:c.G608A:p.R203Q,FKTN:NM_001198963:exon6:c.G608A:p.R203Q	exonic	ENSG00000106692	NA	nonsynonymous SNV	ENSG00000106692:ENST00000357998:exon4:c.G608A:p.R203Q,ENSG00000106692:ENST00000223528:exon5:c.G608A:p.R203Q,ENSG00000106692:ENST00000374705:exon5:c.G539A:p.R180Q,ENSG00000106692:ENST00000540160:exon5:c.G608A:p.R203Q,ENSG00000106692:ENST00000448551:exon6:c.G608A:p.R203Q,ENSG00000106692:ENST00000602661:exon6:c.G608A:p.R203Q	Score=575;Name=lod=289	NA	9q31.2	NA	NA	NA	NA	rs34787999	0.2	0.2	0.178	0.158147	0.2724	0.0913	0.2205	0.1339	0.0982	0.29	0.1	0.24	0.13	0.2446	0.32	0.16	T	0.947	P	0.197	B	0.003	N	0.078	P	2.075	M	-1.61	D	-1.150	T	0.000	T	0.114	3.357	17.31	5.36	2.496	4.399	11.545	3.356859	3.356859	0.05	0.318953	0.15842	NA	0.123	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000079437.3;CLNDSDB=.;CLNDSDBID=.	13.9973804
275	13	52676275	52676275	T	G	exonic	NEK5	NA	nonsynonymous SNV	NEK5:NM_199289:exon10:c.A763C:p.K255Q	exonic	ENSG00000197168	NA	nonsynonymous SNV	ENSG00000197168:ENST00000465811:exon8:c.A763C:p.K255Q,ENSG00000197168:ENST00000355568:exon10:c.A763C:p.K255Q	Score=478;Name=lod=117	NA	13q14.3	NA	NA	NA	NA	rs34756139	0.09	0.09	0.075	0.0720847	0.1173	0.0546	0.1167	0.0197	0.0828	0.13	0.06	0.13	0.03	0.1068	0.13	0.31	T	0.995	D	0.92	D	0.000	D	0.235	P	0.495	N	-0.19	T	-1.010	T	0.004	T	0.257	2.391	13.95	4.81	1.093	3.451	11.992	2.391323	2.391323	0.04	0.113953	0.039492	ID=COSM147693;OCCURENCE=1(stomach)	0.022	NA	13.9952804
276	10	115352005	115352005	A	G	exonic	NRAP	NA	nonsynonymous SNV	NRAP:NM_006175:exon38:c.T4487C:p.L1496P,NRAP:NM_001261463:exon39:c.T4592C:p.L1531P,NRAP:NM_198060:exon39:c.T4592C:p.L1531P	exonic	ENSG00000197893	NA	nonsynonymous SNV	ENSG00000197893:ENST00000360478:exon38:c.T4487C:p.L1496P,ENSG00000197893:ENST00000369360:exon38:c.T4511C:p.L1504P,ENSG00000197893:ENST00000359988:exon39:c.T4592C:p.L1531P,ENSG00000197893:ENST00000369358:exon39:c.T4616C:p.L1539P	Score=502;Name=lod=146	NA	10q25.3	NA	NA	NA	NA	rs11196389	0.09	0.09	0.063	0.0876597	0.1193	0.1062	0.0735	0.0439	0.1053	0.11	0.11	0.07	0.04	0.1039	0.12	0.37	T	0.998	D	0.982	D	0.000	D	0.000	P	1.565	L	2.29	T	-1.160	T	0.002	T	0.792	3.396	17.47	5.67	2.288	7.076	16.204	3.396449	3.396449	0.05	0.122326	0.052882	NA	0.043	NA	13.9878074
276	17	5366947	5366947	G	A	exonic	DHX33	NA	nonsynonymous SNV	DHX33:NM_020162:exon2:c.C352T:p.R118C	exonic	ENSG00000005100	NA	nonsynonymous SNV	ENSG00000005100:ENST00000225296:exon2:c.C352T:p.R118C	Score=563;Name=lod=259	NA	17p13.2	NA	NA	NA	NA	rs8069315	0.11	0.11	0.116	0.108227	0.1233	0.0228	0.0677	0.233	0.0409	0.13	0.02	0.09	0.22	0.1086	0.22	0.01	D	0.136	B	0.032	B	0.000	D	0.000	P	2.55	M	3.16	T	-1.044	T	0.000	T	0.311	4.826	27.4	5.04	2.340	4.532	17.368	4.825669	4.825669	0.03	0.114186	0.205175	NA	0.109	NA	13.9872474
276	10	96702047	96702047	C	T	exonic	CYP2C9	NA	nonsynonymous SNV	CYP2C9:NM_000771:exon3:c.C430T:p.R144C	exonic	ENSG00000138109	NA	nonsynonymous SNV	ENSG00000138109:ENST00000260682:exon3:c.C430T:p.R144C	Score=532;Name=lod=194	Name=Warfarin maintenance dose	10q23.33	NA	NA	NA	NA	rs1799853	0.07	0.07	0.045	0.0479233	0.1243	0.001	0.0994	0.0083	0.0348	0.12	0.0035	0.12	0.02	0.0914	0.13	0.01	D	1.0	D	0.995	D	0.000	U	0.002	P	2.275	M	-0.44	T	-0.866	T	0.007	T	0.648	3.015	16.06	1.42	0.194	-0.307	5.909	3.014845	3.014845	0.03	0.130789	0.026782	NA	0.094	CLINSIG=other;CLNDBN=Warfarin_response;CLNREVSTAT=single;CLNACC=RCV000008920.1;CLNDSDB=MedGen:OMIM;CLNDSDBID=CN078029:122700	13.9868444
276	4	107845794	107845794	C	T	exonic	DKK2	NA	nonsynonymous SNV	DKK2:NM_014421:exon3:c.G437A:p.R146Q	exonic	ENSG00000155011	NA	nonsynonymous SNV	ENSG00000155011:ENST00000285311:exon3:c.G437A:p.R146Q,ENSG00000155011:ENST00000513208:exon4:c.G137A:p.R46Q,ENSG00000155011:ENST00000510463:exon5:c.G299A:p.R100Q	Score=550;Name=lod=230	NA	4q25	NA	NA	NA	NA	rs17037102	0.17	0.17	0.15	0.165535	0.1083	0.3859	0.3069	0.0053	0.1135	0.13	0.34	0.24	0.01	0.1365	0.34	0.1	T	1.0	D	0.992	D	0.000	D	0.051	P	0.895	L	0.94	T	-1.041	T	0.000	T	0.391	3.264	16.95	5.75	2.717	2.645	19.946	3.263558	3.263558	0.41	0.102442	0.032002	ID=COSM149724;OCCURENCE=1(stomach),2(prostate)	0.087	NA	13.9860914
276	16	81241100	81241100	G	C	exonic	PKD1L2	NA	nonsynonymous SNV	PKD1L2:NM_001076780:exon5:c.C901G:p.P301A	exonic	ENSG00000166473,ENSG00000269323	NA	nonsynonymous SNV	ENSG00000166473:ENST00000337114:exon5:c.C901G:p.P301A,ENSG00000269323:ENST00000599697:exon5:c.C901G:p.P301A	Score=410;Name=lod=62	NA	16q23.2	NA	NA	NA	NA	rs11150370	0.51	0.51	0.457	0.473642	0.4384	0.8661	0.4784	0.177	0.5031	0.46	0.84	0.48	0.22	0.482	0.84	0.03	D	1.0	D	0.977	D	0.000	D	0.000	P	.	.	-0.2	T	-0.975	T	0.000	T	0.351	2.742	15.13	4.93	2.277	6.049	18.154	2.741991	2.741991	0	0.427427	0.207368	NA	NA	NA	13.9855064
277	2	10930903	10930903	T	C	exonic	PDIA6	NA	nonsynonymous SNV	PDIA6:NM_005742:exon7:c.A641G:p.K214R	exonic	ENSG00000143870	NA	nonsynonymous SNV	ENSG00000143870:ENST00000272227:exon7:c.A641G:p.K214R,ENSG00000143870:ENST00000381611:exon8:c.A656G:p.K219R,ENSG00000143870:ENST00000404824:exon8:c.A785G:p.K262R,ENSG00000143870:ENST00000540494:exon8:c.A632G:p.K211R,ENSG00000143870:ENST00000404371:exon9:c.A797G:p.K266R	Score=429;Name=lod=74	NA	2p25.1	Score=926;Name=V$ISRE_01	Name=MEF2A	Name=8	NA	rs4807	0.27	0.27	0.224	0.28135	0.2654	0.3948	0.3372	0.1059	0.3783	0.27	0.35	0.36	0.12	0.298	0.36	0.06	T	0.049	B	0.469	P	0.000	N	0.000	P	1.215	L	3.9	T	-0.867	T	0.000	T	0.289	3.381	17.41	4.56	1.016	5.144	11.426	3.381466	3.381466	0.04	0.285233	0.124149	ID=COSM1398675;OCCURENCE=1(large_intestine)	0.232	NA	13.9847004
277	2	179432185	179432185	A	G	exonic	TTN	NA	nonsynonymous SNV	TTN:NM_003319:exon154:c.T51479C:p.I17160T,TTN:NM_133432:exon155:c.T51854C:p.I17285T,TTN:NM_133437:exon155:c.T52055C:p.I17352T,TTN:NM_133378:exon275:c.T70970C:p.I23657T,TTN:NM_001256850:exon276:c.T73751C:p.I24584T,TTN:NM_001267550:exon326:c.T78674C:p.I26225T	exonic	ENSG00000155657	NA	nonsynonymous SNV	ENSG00000155657:ENST00000460472:exon154:c.T51479C:p.I17160T,ENSG00000155657:ENST00000342175:exon155:c.T52055C:p.I17352T,ENSG00000155657:ENST00000359218:exon155:c.T51854C:p.I17285T,ENSG00000155657:ENST00000342992:exon275:c.T70970C:p.I23657T,ENSG00000155657:ENST00000591111:exon276:c.T73751C:p.I24584T,ENSG00000155657:ENST00000589042:exon326:c.T78674C:p.I26225T	Score=609;Name=lod=398	NA	2q31.2	NA	NA	NA	NA	rs12463674	0.15	0.15	0.143	0.129992	0.3091	0.0427	0.1124	0.0053	0.2168	0.32	0.04	0.15	0.01	0.2368	0.32	0	D	0.801	P	0.192	B	.	.	0.000	P	2.34	M	-0.64	T	-1.099	T	0.000	T	0.626	2.876	15.58	5.65	2.140	5.989	15.874	2.875811	2.875811	NA	0.302956	0.054348	NA	0.174	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=mult|single;CLNACC=RCV000040637.3|RCV000125894.1;CLNDSDB=.|.;CLNDSDBID=.|.	13.9844774
277	22	50297888	50297888	T	C	exonic	ALG12	NA	nonsynonymous SNV	ALG12:NM_024105:exon9:c.A1177G:p.I393V	exonic	ENSG00000182858	NA	nonsynonymous SNV	ENSG00000182858:ENST00000330817:exon9:c.A1177G:p.I393V	Score=358;Name=lod=38	NA	22q13.33	NA	NA	NA	NA	rs3922872	0.09	0.09	0.079	0.0916534	0.1243	0.0565	0.0821	0.0386	0.1728	0.13	0.06	0.1	0.04	0.1122	0.13	0.17	T	0.999	D	0.998	D	0.000	D	0.000	P	1.655	L	0.5	T	-1.009	T	0.004	T	0.13	2.725	15.07	4.27	0.855	4.972	11.073	2.724709	2.724709	0	0.114767	0.04562	NA	0.174	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000082161.1;CLNDSDB=.;CLNDSDBID=.	13.9820664
277	4	103964529	103964529	A	C	exonic	SLC9B2	NA	nonsynonymous SNV	SLC9B2:NM_178833:exon9:c.T1070G:p.F357C	exonic	ENSG00000164038	NA	nonsynonymous SNV	ENSG00000164038:ENST00000506288:exon6:c.T770G:p.F257C,ENSG00000164038:ENST00000503103:exon8:c.T899G:p.F300C,ENSG00000164038:ENST00000503230:exon8:c.T899G:p.F300C,ENSG00000164038:ENST00000339611:exon9:c.T1070G:p.F357C,ENSG00000164038:ENST00000362026:exon9:c.T1070G:p.F357C,ENSG00000164038:ENST00000394785:exon9:c.T1070G:p.F357C	Score=412;Name=lod=63	NA	4q24	NA	NA	NA	NA	rs2276976	0.12	0.12	0.106	0.14357	0.1064	0.1806	0.1628	0.062	0.2403	0.1	0.16	0.16	0.08	0.1313	0.16	0.18	T	0.995	D	0.911	D	0.066	N	0.004	P	2.135	M	2.33	T	-1.187	T	0.001	T	0.45	2.917	15.72	5.93	2.270	6.434	16.387	2.917232	2.917232	0.07	0.115814	0.059918	NA	0.123	NA	13.9798194
277	3	12393125	12393125	C	G	exonic	PPARG	NA	nonsynonymous SNV	PPARG:NM_015869:exon1:c.C34G:p.P12A	exonic	ENSG00000132170	NA	nonsynonymous SNV	ENSG00000132170:ENST00000287820:exon1:c.C34G:p.P12A,ENSG00000132170:ENST00000397023:exon1:c.C34G:p.P12A	Score=300;Name=lod=22	Name=Type 2 diabetes,Fasting insulin-related traits (interaction with BMI)	3p25.2	Score=843;Name=V$RORA2_01	NA	NA	NA	rs1801282	0.07	0.07	0.054	0.0702875	0.1203	0.0258	0.1167	0.0053	0.1196	0.12	0.04	0.07	0.01	0.1101	0.12	0.02	D	0.0	B	0.0	B	0.541	N	0.000	P	0.695	N	-2.99	D	-0.726	T	0.019	T	0.154	2.182	13.25	2.93	0.859	0.376	5.341	2.181534	2.181534	0	0.123605	0.026101	NA	0.051	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118044.2;CLNDSDB=.;CLNDSDBID=.	13.9793284
278	5	7897191	7897191	C	T	exonic	MTRR	NA	nonsynonymous SNV	MTRR:NM_002454:exon14:c.C1783T:p.H595Y,MTRR:NM_024010:exon14:c.C1864T:p.H622Y	exonic	ENSG00000124275	NA	nonsynonymous SNV	ENSG00000124275:ENST00000264668:exon14:c.C1864T:p.H622Y,ENSG00000124275:ENST00000440940:exon14:c.C1783T:p.H595Y	NA	NA	5p15.31	Score=682;Name=V$P53_01	Name=CTCF,YY1_(C-20)	NA	NA	rs10380	0.19	0.19	0.18	0.219449	0.1103	0.1399	0.3199	0.3684	0.1411	0.1	0.15	0.26	0.32	0.1509	0.32	0.04	D	0.001	B	0.004	B	0.438	N	0.965	P	2.02	M	-2.14	D	-1.095	T	0.000	T	0.051	-2.516	0.003	4.53	1.264	0.532	11.123	-2.516189	NA	0.15	0.097791	0.320018	NA	0.283	NA	13.9743424
278	3	49721532	49721532	G	A	exonic	MST1	NA	nonsynonymous SNV	MST1:NM_020998:exon18:c.C2107T:p.R703C	exonic	ENSG00000173531	NA	nonsynonymous SNV	ENSG00000173531:ENST00000449682:exon18:c.C2107T:p.R703C	NA	Name=Ulcerative colitis,Inflammatory bowel disease,Crohn's disease,Primary sclerosing cholangitis	3p21.31	Score=761;Name=V$PAX5_02	NA	NA	NA	rs3197999	0.22	0.22	0.203	0.191893	0.3131	0.0565	0.1686	0.2179	0.1881	0.31	0.06	0.22	0.24	0.2557	0.31	0.02	D	0.727	P	0.338	B	0.290	N	0.998	P	2.26	M	-2.48	D	-1.025	T	0.000	T	0.381	3.327	17.19	-2.82	-0.545	1.075	12.694	3.327308	3.327308	0.03	0.293605	0.235134	ID=COSM149393;OCCURENCE=1(stomach)	0.109	NA	13.9709284
279	16	70164334	70164334	A	G	exonic	PDPR	NA	nonsynonymous SNV	PDPR:NM_017990:exon7:c.A616G:p.I206V	exonic	ENSG00000090857	NA	nonsynonymous SNV	ENSG00000090857:ENST00000398122:exon5:c.A316G:p.I106V,ENSG00000090857:ENST00000565186:exon5:c.A616G:p.I206V,ENSG00000090857:ENST00000288050:exon7:c.A616G:p.I206V,ENSG00000090857:ENST00000568530:exon7:c.A616G:p.I206V	Score=500;Name=lod=143	NA	16q22.1	NA	NA	NA	NA	rs10852462	0.33	0.33	0.313	NA	NA	NA	NA	NA	NA	0.4	0.23	0.32	0.37	0.4008	0.4	0.37	T	0.071	B	0.074	B	0.000	D	1.000	D	0.12	N	-1.51	D	-1.042	T	0.000	T	0.122	1.707	11.67	4.93	1.843	5.916	8.479	1.706647	1.706647	0.42	NA	NA	ID=COSM148098;OCCURENCE=1(stomach)	0.167	NA	13.9325334
279	8	101719138	101719138	C	T	exonic	PABPC1	NA	nonsynonymous SNV	PABPC1:NM_002568:exon10:c.G1424A:p.R475Q	exonic	ENSG00000070756	NA	nonsynonymous SNV	ENSG00000070756:ENST00000522658:exon1:c.G65A:p.R22Q,ENSG00000070756:ENST00000318607:exon10:c.G1424A:p.R475Q,ENSG00000070756:ENST00000519004:exon11:c.G1289A:p.R430Q,ENSG00000070756:ENST00000522387:exon11:c.G1328A:p.R443Q	Score=668;Name=lod=693	NA	8q22.3	Score=876;Name=V$MYCMAX_02	NA	Name=2	NA	rs79940439	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4025	NA	0.53	T	0.032	B	0.004	B	0.003	N	1.000	D	0.86	L	2.73	T	-1.063	T	0.088	T	0.852	4.677	25.8	5.63	2.816	7.212	20.034	4.676811	4.676811	0.15	NA	NA	NA	NA	NA	13.9308334
280	19	6312290	6312290	T	C	exonic	ACER1	NA	nonsynonymous SNV	ACER1:NM_133492:exon3:c.A220G:p.M74V	exonic	ENSG00000167769	NA	nonsynonymous SNV	ENSG00000167769:ENST00000301452:exon3:c.A220G:p.M74V	Score=576;Name=lod=291	NA	19p13.3	NA	Name=CTCF_(SC-5916),CTCF,Rad21	Name=4	NA	rs72981971	0.17	0.17	0.141	0.159944	0.1332	0.3194	0.1354	0.0113	0.2413	0.14	0.38	0.14	0.02	0.158	0.38	0.81	T	0.01	B	0.018	B	0.001	D	0.242	P	0.455	N	1.01	T	-0.937	T	0.000	T	0.104	-0.541	1.543	2.4	1.884	1.588	3.792	-0.541318	NA	1	0.125349	0.036314	NA	0.152	NA	13.9167844
280	14	100795139	100795139	G	T	exonic	SLC25A47	NA	nonsynonymous SNV	SLC25A47:NM_207117:exon5:c.G404T:p.R135L	exonic	ENSG00000140107	NA	nonsynonymous SNV	ENSG00000140107:ENST00000361529:exon5:c.G404T:p.R135L	NA	NA	14q32.2	Score=771;Name=V$HEN1_02	Name=HNF4A_(H-171),HEY1,TBP,TAF1,HNF4A,Pol2,HNF4G_(SC-6558)	Name=4	NA	rs35007880	0.28	0.28	0.252	0.327276	0.492	0.2262	0.3127	0.0424	0.6575	0.48	0.18	0.33	0.05	0.4446	0.48	0.68	T	0.936	P	0.541	P	0.042	N	0.000	P	1.01	L	-1.52	D	-0.944	T	0.000	T	0.249	0.907	8.69	3.93	2.262	1.603	3.200	0.907281	NA	0.3	0.479952	0.101711	ID=COSM432666;OCCURENCE=1(breast)	0.319	NA	13.9167814
281	18	28720147	28720147	C	T	exonic	DSC1	NA	nonsynonymous SNV	DSC1:NM_004948:exon10:c.G1378A:p.V460I,DSC1:NM_024421:exon10:c.G1378A:p.V460I	exonic	ENSG00000134765	NA	nonsynonymous SNV	ENSG00000134765:ENST00000257197:exon10:c.G1378A:p.V460I,ENSG00000134765:ENST00000257198:exon10:c.G1378A:p.V460I	Score=363;Name=lod=40	NA	18q12.1	NA	NA	NA	NA	rs17800159	0.21	0.21	0.189	0.186302	0.1332	0.4792	0.232	0.0091	0.1462	0.12	0.49	0.21	0.02	0.1594	0.49	0.56	T	0.999	D	0.995	D	0.000	D	0.005	P	1.62	L	-0.09	T	-0.931	T	0.000	T	0.099	2.631	14.76	5.83	2.761	3.858	17.903	2.631257	2.631257	0.16	0.128837	0.024966	ID=COSM148417,COSM148416;OCCURENCE=1(stomach)	0.275	NA	13.9118964
281	8	101719201	101719201	A	G	exonic	PABPC1	NA	nonsynonymous SNV	PABPC1:NM_002568:exon10:c.T1361C:p.I454T	exonic	ENSG00000070756	NA	nonsynonymous SNV	ENSG00000070756:ENST00000522658:exon1:c.T2C:p.I1T,ENSG00000070756:ENST00000318607:exon10:c.T1361C:p.I454T,ENSG00000070756:ENST00000519004:exon11:c.T1226C:p.I409T,ENSG00000070756:ENST00000522387:exon11:c.T1265C:p.I422T	Score=668;Name=lod=693	NA	8q22.3	Score=942;Name=V$GATA2_01	NA	NA	NA	rs72681439	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4216	NA	.	.	0.0	B	0.004	B	0.000	D	0.999	D	1.485	L	2.61	T	-0.727	T	0.252	T	0.67	3.423	17.57	5.63	2.272	8.628	16.125	3.422927	3.422927	0.26	NA	NA	NA	NA	NA	13.9117334
281	12	29617550	29617550	G	A	exonic	OVCH1	NA	nonsynonymous SNV	OVCH1:NM_183378:exon18:c.C2015T:p.S672F	exonic	ENSG00000187950	NA	nonsynonymous SNV	ENSG00000187950:ENST00000318184:exon18:c.C2015T:p.S672F	Score=259;Name=lod=15	NA	12p11.22	NA	NA	NA	NA	rs11050243	0.16	0.16	0.155	0.182109	0.1352	0.0853	0.1023	0.3585	0.1483	0.14	0.1	0.08	0.33	0.1502	0.34	0.12	T	1.0	D	0.995	D	.	.	0.986	P	2.185	M	0.07	T	-1.050	T	0.000	T	0.193	3.195	16.7	2.73	1.836	1.776	7.077	3.194855	3.194855	0.07	0.141072	0.338918	ID=COSM147461;OCCURENCE=1(stomach)	0.254	NA	13.9068614
282	17	37814080	37814080	G	A	exonic	STARD3	NA	nonsynonymous SNV	STARD3:NM_001165937:exon4:c.G350A:p.R117Q,STARD3:NM_001165938:exon4:c.G350A:p.R117Q,STARD3:NM_006804:exon4:c.G350A:p.R117Q	exonic	ENSG00000131748	NA	nonsynonymous SNV	ENSG00000131748:ENST00000580611:exon3:c.G272A:p.R91Q,ENSG00000131748:ENST00000336308:exon4:c.G350A:p.R117Q,ENSG00000131748:ENST00000394250:exon4:c.G350A:p.R117Q,ENSG00000131748:ENST00000443521:exon4:c.G350A:p.R117Q,ENSG00000131748:ENST00000544210:exon4:c.G350A:p.R117Q,ENSG00000131748:ENST00000577248:exon4:c.G350A:p.R117Q,ENSG00000131748:ENST00000578577:exon4:c.G350A:p.R117Q,ENSG00000131748:ENST00000583419:exon4:c.G350A:p.R117Q,ENSG00000131748:ENST00000583718:exon4:c.G350A:p.R117Q,ENSG00000131748:ENST00000581894:exon5:c.G350A:p.R117Q	Score=545;Name=lod=219	NA	17q12	Score=883;Name=V$ZID_01	Name=ZNF263	NA	NA	rs1877031	0.49	0.49	0.498	0.46905	0.673	0.4157	0.5043	0.1853	0.6728	0.68	0.48	0.53	0.18	0.6146	0.68	0.31	T	0.97	D	0.637	P	0.000	D	0.000	P	1.245	L	0.94	T	-0.978	T	0.000	T	0.531	3.169	16.6	4.38	2.125	3.666	17.305	3.168811	3.168811	0.12	0.652674	0.236723	ID=COSM148258;OCCURENCE=1(stomach),1(large_intestine)	0.471	NA	13.8930594
283	16	15111218	15111218	C	T	exonic	PDXDC1	NA	nonsynonymous SNV	PDXDC1:NM_015027:exon11:c.C902T:p.P301L	exonic	ENSG00000179889	NA	nonsynonymous SNV	ENSG00000179889:ENST00000447912:exon10:c.C629T:p.P210L,ENSG00000179889:ENST00000450288:exon10:c.C818T:p.P273L,ENSG00000179889:ENST00000455313:exon10:c.C833T:p.P278L,ENSG00000179889:ENST00000567306:exon10:c.C788T:p.P263L,ENSG00000179889:ENST00000569715:exon10:c.C821T:p.P274L,ENSG00000179889:ENST00000325823:exon11:c.C857T:p.P286L,ENSG00000179889:ENST00000396410:exon11:c.C902T:p.P301L,ENSG00000179889:ENST00000535621:exon11:c.C902T:p.P301L,ENSG00000179889:ENST00000563679:exon11:c.C956T:p.P319L	Score=346;Name=lod=34	NA	16p13.11	Score=740;Name=V$PPARA_01	Name=p300,FOXA1_(SC-101058),FOXA2_(SC-6554),FOXA1_(C-20)	Name=90	NA	rs4985162	0.27	0.27	0.164	NA	NA	NA	NA	NA	NA	0.2	0.43	0.35	0.12	0.2654	0.43	0.35	T	0.015	B	0.016	B	0.000	N	0.001	P	0.55	N	1.19	T	-0.920	T	0.000	T	0.368	2.317	13.7	4.49	1.260	3.082	12.440	2.316841	2.316841	0.33	0.183151	0.145426	NA	0.051	NA	13.8847824
283	5	120021817	120021817	C	A	exonic	PRR16	NA	nonsynonymous SNV	PRR16:NM_016644:exon3:c.C259A:p.P87T	exonic	ENSG00000184838	NA	nonsynonymous SNV	ENSG00000184838:ENST00000407149:exon2:c.C328A:p.P110T,ENSG00000184838:ENST00000509923:exon2:c.C118A:p.P40T,ENSG00000184838:ENST00000379551:exon3:c.C259A:p.P87T,ENSG00000184838:ENST00000446965:exon3:c.C118A:p.P40T,ENSG00000184838:ENST00000505123:exon4:c.C118A:p.P40T	Score=355;Name=lod=37	NA	5q23.1	NA	NA	NA	NA	rs17853861	0.1	0.1	0.092	0.091853	0.162	0.0536	0.085	0.0711	0.092	0.16	0.06	0.09	0.05	0.1291	0.16	.	.	1.0	D	0.999	D	0.000	D	0.000	P	1.845	L	0.83	T	-1.203	T	0.002	T	0.481	3.74	18.99	5.58	2.640	3.306	18.398	3.740256	3.740256	0	0.158488	0.079891	ID=COSM149903;OCCURENCE=1(stomach)	NA	NA	13.8837454
284	16	65025718	65025718	G	A	exonic	CDH11	NA	nonsynonymous SNV	CDH11:NM_001797:exon6:c.C764T:p.T255M	exonic	ENSG00000140937	NA	nonsynonymous SNV	ENSG00000140937:ENST00000566827:exon5:c.C386T:p.T129M,ENSG00000140937:ENST00000268603:exon6:c.C764T:p.T255M,ENSG00000140937:ENST00000394156:exon6:c.C764T:p.T255M	Score=636;Name=lod=513	NA	16q21	NA	NA	NA	NA	rs35195	0.22	0.22	0.196	0.18151	0.331	0.2044	0.2075	0.0234	0.1994	0.32	0.23	0.25	0.03	0.2728	0.36	0.01	D	0.996	D	0.88	P	0.000	N	0.000	P	2.205	M	3.92	T	-0.899	T	0.000	T	0.227	3.782	19.2	4.59	1.344	3.388	13.283	3.782474	3.782474	0	0.356047	0.072855	NA	0.159	NA	13.8734864
285	16	72184566	72184566	C	T	exonic	PMFBP1	NA	nonsynonymous SNV	PMFBP1:NM_031293:exon5:c.G577A:p.E193K,PMFBP1:NM_001160213:exon6:c.G142A:p.E48K	exonic	ENSG00000118557	NA	nonsynonymous SNV	ENSG00000118557:ENST00000237353:exon5:c.G577A:p.E193K,ENSG00000118557:ENST00000355636:exon5:c.G142A:p.E48K,ENSG00000118557:ENST00000537465:exon5:c.G577A:p.E193K	Score=440;Name=lod=82	NA	16q22.2	NA	NA	NA	NA	rs35370634	0.08	0.08	0.079	0.0876597	0.162	0.0218	0.0634	0.0151	0.1943	0.17	0.02	0.07	0.02	0.1449	0.17	0.75	T	1.0	D	0.989	D	0.000	D	0.000	P	0.695	N	2.47	T	-0.986	T	0.002	T	0.432	5.204	33	6.17	2.941	3.761	16.380	5.203928	5.203928	0	0.163256	0.035942	NA	0.138	NA	13.8631774
286	17	39622068	39622068	G	T	exonic	KRT32	NA	nonsynonymous SNV	KRT32:NM_002278:exon3:c.C665A:p.S222Y	exonic	ENSG00000108759	NA	nonsynonymous SNV	ENSG00000108759:ENST00000225899:exon3:c.C665A:p.S222Y	Score=538;Name=lod=205	NA	17q21.2	NA	NA	NA	NA	rs2071561	0.47	0.47	0.431	0.499601	0.4761	0.6369	0.5187	0.2413	0.7178	0.46	0.59	0.57	0.25	0.512	0.59	0	D	0.983	D	0.977	D	0.002	N	0.268	P	3.725	H	-2.74	D	-1.064	T	0.000	T	0.369	3.514	17.95	4.12	1.285	0.600	9.139	3.513733	3.513733	0	0.498605	0.287789	NA	0.42	NA	13.8466284
286	12	124826462	124826462	C	T	exonic	NCOR2	NA	nonsynonymous SNV	NCOR2:NM_001077261:exon35:c.G5065A:p.A1689T,NCOR2:NM_001206654:exon35:c.G5065A:p.A1689T,NCOR2:NM_006312:exon36:c.G5095A:p.A1699T	exonic	ENSG00000196498	NA	nonsynonymous SNV	ENSG00000196498:ENST00000397355:exon34:c.G5068A:p.A1690T,ENSG00000196498:ENST00000404121:exon34:c.G3778A:p.A1260T,ENSG00000196498:ENST00000404621:exon34:c.G5065A:p.A1689T,ENSG00000196498:ENST00000405201:exon34:c.G5095A:p.A1699T,ENSG00000196498:ENST00000429285:exon34:c.G5065A:p.A1689T,ENSG00000196498:ENST00000356219:exon35:c.G5116A:p.A1706T	Score=512;Name=lod=161	NA	12q24.31	NA	NA	NA	NA	rs2229840	0.15	0.15	0.125	0.160942	0.1551	0.1071	0.2637	0.112	0.2157	0.16	0.11	0.23	0.1	0.1705	0.23	0.34	T	1.0	D	0.99	D	0.000	D	0.000	P	0.665	N	2.37	T	-1.025	T	0.000	T	0.378	2.976	15.92	4.37	1.985	4.646	10.589	2.976007	2.976007	0.38	0.162465	0.115932	NA	0.123	NA	13.8452684
287	21	47545768	47545768	G	A	exonic	COL6A2	NA	nonsynonymous SNV	COL6A2:NM_001849:exon26:c.G2039A:p.R680H,COL6A2:NM_058174:exon26:c.G2039A:p.R680H,COL6A2:NM_058175:exon26:c.G2039A:p.R680H	exonic	ENSG00000142173	NA	nonsynonymous SNV	ENSG00000142173:ENST00000413758:exon11:c.G710A:p.R237H,ENSG00000142173:ENST00000397763:exon25:c.G2039A:p.R680H,ENSG00000142173:ENST00000409416:exon25:c.G2039A:p.R680H,ENSG00000142173:ENST00000300527:exon26:c.G2039A:p.R680H,ENSG00000142173:ENST00000310645:exon26:c.G2039A:p.R680H,ENSG00000142173:ENST00000357838:exon26:c.G2039A:p.R680H	Score=584;Name=lod=316	NA	21q22.3	NA	NA	NA	NA	rs1042917	0.44	0.44	0.42	0.39397	0.5099	0.4306	0.6398	0.208	0.3139	0.53	0.41	0.62	0.23	0.4784	0.62	0.09	T	1.0	D	0.982	D	0.000	D	0.000	P	1.39	L	-1.15	T	-0.854	T	0.000	T	0.385	2.613	14.7	4.4	1.998	4.764	16.994	2.613296	2.613296	0.09	0.501163	0.240808	NA	0.268	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000079868.2;CLNDSDB=.;CLNDSDBID=.	13.8438704
287	14	100615961	100615961	C	T	exonic	DEGS2	NA	nonsynonymous SNV	DEGS2:NM_206918:exon2:c.G169A:p.A57T	exonic	ENSG00000168350	NA	nonsynonymous SNV	ENSG00000168350:ENST00000305631:exon2:c.G169A:p.A57T	Score=483;Name=lod=122	NA	14q32.2	Score=718;Name=V$NRSF_01	NA	NA	NA	rs4905937	0.14	0.14	0.115	0.142372	0.167	0.1825	0.1599	0.0749	0.1544	0.16	0.17	0.15	0.08	0.1648	0.17	0.39	T	0.908	P	0.449	P	0.000	D	0.000	P	1.515	L	1.42	T	-1.057	T	0.000	T	0.216	3.522	17.99	4.4	2.154	5.961	17.313	3.521991	3.521991	0.21	0.160224	0.086482	NA	0.072	NA	13.8413094
287	1	205812912	205812912	A	G	exonic	PM20D1	NA	nonsynonymous SNV	PM20D1:NM_152491:exon6:c.T710C:p.I237T	exonic	ENSG00000162877	NA	nonsynonymous SNV	ENSG00000162877:ENST00000367136:exon6:c.T710C:p.I237T	NA	NA	1q32.1	NA	NA	NA	NA	rs7518979	0.27	0.27	0.282	0.254593	0.169	0.3829	0.1398	0.3691	0.137	0.16	0.38	0.12	0.39	0.1782	0.39	0.07	T	0.996	D	0.97	D	0.000	D	0.448	P	3.02	M	2.93	T	-0.977	T	0.000	T	0.359	1.951	12.48	4.92	1.085	6.988	13.217	1.950833	1.950833	0.02	0.145116	0.332728	NA	0.203	NA	13.8410174
288	1	144877176	144877176	C	T	exonic	PDE4DIP	NA	nonsynonymous SNV	PDE4DIP:NM_001198834:exon28:c.G4511A:p.R1504Q,PDE4DIP:NM_014644:exon28:c.G4511A:p.R1504Q,PDE4DIP:NM_001198832:exon31:c.G4379A:p.R1460Q	exonic	ENSG00000178104	NA	nonsynonymous SNV	ENSG00000178104:ENST00000369354:exon28:c.G4511A:p.R1504Q,ENSG00000178104:ENST00000369356:exon28:c.G4511A:p.R1504Q,ENSG00000178104:ENST00000313382:exon31:c.G4379A:p.R1460Q,ENSG00000178104:ENST00000369359:exon31:c.G4919A:p.R1640Q,ENSG00000178104:ENST00000530740:exon31:c.G4919A:p.R1640Q	Score=522;Name=lod=177	NA	1q21.1	Score=827;Name=V$SREBP1_02	Name=HEY1,CTCF	NA	NA	rs2762875	0.5	0.5	0.44	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	1	T	0.0	B	0.0	B	.	.	1.000	D	-2.325	N	5.54	T	-0.991	T	0.000	T	0.307	0.264	5.425	5.18	0.994	5.444	9.320	0.263515	NA	1	NA	NA	NA	0.5	NA	13.8333334
288	1	144882823	144882823	C	T	exonic	PDE4DIP	NA	nonsynonymous SNV	PDE4DIP:NM_001198834:exon24:c.G3196A:p.A1066T,PDE4DIP:NM_014644:exon24:c.G3196A:p.A1066T,PDE4DIP:NM_001198832:exon27:c.G3394A:p.A1132T	exonic	ENSG00000178104	NA	nonsynonymous SNV	ENSG00000178104:ENST00000369354:exon24:c.G3196A:p.A1066T,ENSG00000178104:ENST00000369356:exon24:c.G3196A:p.A1066T,ENSG00000178104:ENST00000313382:exon27:c.G3394A:p.A1132T,ENSG00000178104:ENST00000369359:exon27:c.G3607A:p.A1203T,ENSG00000178104:ENST00000530740:exon27:c.G3607A:p.A1203T	Score=559;Name=lod=249	NA	1q21.1	NA	NA	NA	NA	rs1698647	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	0.58	T	0.998	D	0.995	D	.	.	1.000	D	0.805	L	4.69	T	-0.530	T	0.009	T	0.429	5.06	31	5.76	2.736	3.310	17.451	5.060447	5.060447	0.07	NA	NA	NA	0.5	NA	13.8333334
288	1	144912233	144912233	C	T	exonic	PDE4DIP	NA	nonsynonymous SNV	PDE4DIP:NM_001002811:exon11:c.G2531A:p.R844H,PDE4DIP:NM_001002812:exon15:c.G2042A:p.R681H,PDE4DIP:NM_001198834:exon15:c.G2042A:p.R681H,PDE4DIP:NM_014644:exon15:c.G2042A:p.R681H,PDE4DIP:NM_001198832:exon18:c.G2240A:p.R747H	exonic	ENSG00000178104	NA	nonsynonymous SNV	ENSG00000178104:ENST00000313431:exon11:c.G2531A:p.R844H,ENSG00000178104:ENST00000479408:exon11:c.G1403A:p.R468H,ENSG00000178104:ENST00000529945:exon11:c.G2531A:p.R844H,ENSG00000178104:ENST00000369349:exon15:c.G2042A:p.R681H,ENSG00000178104:ENST00000369351:exon15:c.G2042A:p.R681H,ENSG00000178104:ENST00000369354:exon15:c.G2042A:p.R681H,ENSG00000178104:ENST00000369356:exon15:c.G2042A:p.R681H,ENSG00000178104:ENST00000313382:exon18:c.G2240A:p.R747H,ENSG00000178104:ENST00000369359:exon18:c.G2453A:p.R818H,ENSG00000178104:ENST00000530740:exon18:c.G2453A:p.R818H	Score=476;Name=lod=115	NA	1q21.1	Score=735;Name=V$MYOGNF1_01	NA	NA	NA	rs1629011	0.42	0.42	0.45	NA	NA	NA	NA	NA	NA	0.43	0.44	0.44	0.38	0.5	0.5	0.12	T	1.0	D	0.998	D	.	.	1.000	D	0.975	L	4.35	T	-1.123	T	0.052	T	0.571	1.457	10.82	4.62	0.743	2.224	12.264	1.456915	1.456915	0	NA	NA	NA	0.5	NA	13.8333334
288	19	55677895	55677895	A	C	exonic	DNAAF3	NA	nonsynonymous SNV	DNAAF3:NM_001256714:exon1:c.T122G:p.I41R,DNAAF3:NM_178837:exon1:c.T122G:p.I41R	exonic	ENSG00000167646	NA	nonsynonymous SNV	ENSG00000167646:ENST00000391720:exon1:c.T122G:p.I41R,ENSG00000167646:ENST00000527223:exon1:c.T122G:p.I41R	Score=336;Name=lod=31	NA	19q13.42	NA	Name=NF-YB,Pol2,NF-YA,E2F6_(H-50),STAT3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000008294	NA	0.04	D	0.729	P	0.354	B	0.890	N	1.000	D	0.69	N	2.05	T	-1.092	T	0.040	T	0.189	1.47	10.86	2.91	0.864	0.427	5.976	1.469847	1.469847	0	NA	NA	NA	NA	NA	13.8333251
288	16	2150254	2150254	G	A	exonic	PKD1	NA	nonsynonymous SNV	PKD1:NM_000296:exon28:c.C9625T:p.R3209C,PKD1:NM_001009944:exon28:c.C9625T:p.R3209C	exonic	ENSG00000008710	NA	nonsynonymous SNV	ENSG00000008710:ENST00000262304:exon28:c.C9625T:p.R3209C,ENSG00000008710:ENST00000423118:exon28:c.C9625T:p.R3209C	Score=544;Name=lod=217	NA	16p13.3	NA	NA	NA	NA	rs147967021	0.0005	0.0005	0.001	0.000199681	NA	NA	0.0014	NA	NA	NA	NA	0.0028	NA	0.00009404	0.0028	0	D	0.891	P	0.283	B	0.002	N	0.998	D	1.265	L	-0.24	T	-0.685	T	0.188	T	0.589	2.133	13.09	4.69	2.424	2.193	10.831	2.133364	2.133364	0	NA	NA	NA	NA	NA	13.8332394
288	6	109954427	109954427	C	T	exonic	AK9	NA	nonsynonymous SNV	AK9:NM_001145128:exon11:c.G1033A:p.D345N,AK9:NM_145025:exon11:c.G1033A:p.D345N	exonic	ENSG00000155085	NA	nonsynonymous SNV	ENSG00000155085:ENST00000285397:exon11:c.G1033A:p.D345N,ENSG00000155085:ENST00000368948:exon11:c.G1033A:p.D345N,ENSG00000155085:ENST00000424296:exon11:c.G1033A:p.D345N	Score=414;Name=lod=64	NA	6q21	NA	NA	NA	NA	rs200088189	NA	NA	NA	0.000399361	NA	NA	NA	NA	0.002	NA	NA	NA	NA	0.0001	NA	.	.	0.536	P	0.246	B	0.000	D	1.000	D	1.15	L	-0.04	T	-1.005	T	0.099	T	0.044	2.271	13.55	4.8	1.389	2.106	12.515	2.271427	2.271427	0.02	NA	NA	NA	NA	NA	13.8332334
288	15	70949424	70949424	T	C	exonic	UACA	NA	nonsynonymous SNV	UACA:NM_001008224:exon19:c.A4183G:p.I1395V,UACA:NM_018003:exon19:c.A4222G:p.I1408V	exonic	ENSG00000137831	NA	nonsynonymous SNV	ENSG00000137831:ENST00000539319:exon16:c.A3895G:p.I1299V,ENSG00000137831:ENST00000322954:exon19:c.A4222G:p.I1408V,ENSG00000137831:ENST00000379983:exon19:c.A4183G:p.I1395V,ENSG00000137831:ENST00000560441:exon19:c.A4177G:p.I1393V	Score=595;Name=lod=350	NA	15q23	NA	NA	NA	NA	rs143220817	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00008257	0.0002	0.04	D	0.783	P	0.205	B	0.043	N	1.000	D	1.61	L	1.58	T	-0.963	T	0.103	T	0.695	3.457	17.71	5.5	2.216	5.765	15.914	3.456784	3.456784	0	0.000116	0.000227	NA	NA	NA	13.8331348
288	2	71163173	71163173	C	T	exonic	ATP6V1B1	NA	nonsynonymous SNV	ATP6V1B1:NM_001692:exon1:c.C89T:p.T30I	exonic	ENSG00000116039	NA	nonsynonymous SNV	ENSG00000116039:ENST00000234396:exon1:c.C89T:p.T30I,ENSG00000116039:ENST00000412314:exon1:c.C89T:p.T30I,ENSG00000116039:ENST00000432367:exon1:c.C89T:p.T30I	Score=470;Name=lod=108	NA	2p13.3	NA	NA	NA	NA	rs17720303	0.17	0.17	0.138	0.158546	0.1531	0.1865	0.2147	0.115	0.1544	0.14	0.2	0.24	0.11	0.1802	0.24	0.15	T	0.0	B	0.001	B	0.000	D	0.000	P	0.805	L	-1.64	D	-1.098	T	0.000	T	0.335	2.772	15.23	4.89	2.256	2.279	15.559	2.7721	2.7721	0.08	0.167791	0.14049	NA	0.13	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000037210.1;CLNDSDB=.;CLNDSDBID=.	13.8322424
288	17	44248837	44248837	T	C	exonic	KANSL1	NA	nonsynonymous SNV	KANSL1:NM_001193466:exon2:c.A673G:p.N225D,KANSL1:NM_015443:exon2:c.A673G:p.N225D,KANSL1:NM_001193465:exon3:c.A673G:p.N225D	exonic	ENSG00000120071	NA	nonsynonymous SNV	ENSG00000120071:ENST00000432791:exon1:c.A673G:p.N225D,ENSG00000120071:ENST00000575318:exon1:c.A673G:p.N225D,ENSG00000120071:ENST00000262419:exon2:c.A673G:p.N225D,ENSG00000120071:ENST00000572904:exon2:c.A673G:p.N225D,ENSG00000120071:ENST00000574590:exon2:c.A673G:p.N225D	Score=699;Name=lod=924	NA	17q21.31	Score=782;Name=V$MEF2_02	NA	NA	NA	rs35643216	0.1	0.1	0.078	0.0726837	0.1998	0.001	0.1398	0.0113	0.0511	0.19	0.0017	0.16	0.02	0.1205	0.19	0.13	T	0.42	B	0.128	B	0.000	D	1.000	D	0.205	N	2.85	T	-0.711	T	0.000	T	0.271	1.907	12.33	4.97	2.317	3.265	9.254	1.907105	1.907105	0.1	0.181977	0.037903	NA	0.051	NA	13.8310564
288	14	93649713	93649713	T	C	exonic	MOAP1	NA	nonsynonymous SNV	MOAP1:NM_022151:exon3:c.A875G:p.Q292R	exonic	ENSG00000165943	NA	nonsynonymous SNV	ENSG00000165943:ENST00000556883:exon2:c.A875G:p.Q292R,ENSG00000165943:ENST00000298894:exon3:c.A875G:p.Q292R	Score=329;Name=lod=29	NA	14q32.12	Score=926;Name=V$AP1_C	NA	Name=4	NA	rs74075220	0.01	0.01	0.006	0.00758786	0.001	NA	0.0043	0.0257	NA	NA	NA	0.01	0.03	0.0026	0.03	0.2	T	0.784	P	0.391	B	.	.	0.964	N	1.445	L	2.88	T	-1.065	T	0.011	T	0.146	1.711	11.68	3.45	1.816	2.514	8.672	1.710811	1.710811	0.15	0.001163	0.015433	NA	0.022	NA	13.8285704
288	15	78295765	78295765	T	C	exonic	TBC1D2B	NA	nonsynonymous SNV	TBC1D2B:NM_015079:exon11:c.A2456G:p.Q819R,TBC1D2B:NM_144572:exon11:c.A2456G:p.Q819R	exonic	ENSG00000167202	NA	nonsynonymous SNV	ENSG00000167202:ENST00000300584:exon11:c.A2456G:p.Q819R,ENSG00000167202:ENST00000409931:exon11:c.A2456G:p.Q819R	Score=461;Name=lod=100	NA	15q24.3	NA	NA	NA	NA	rs138988358	0.0023	0.0023	NA	0.00359425	0.005	NA	0.0029	0.0083	NA	0.0026	NA	0.01	0.002	0.0018	0.01	0.11	T	0.642	P	0.412	B	0.000	D	1.000	D	1.005	L	2.0	T	-0.892	T	0.147	T	0.579	2.462	14.19	5.29	1.988	6.116	14.405	2.462446	2.462446	0.01	0.001514	0.004326	NA	NA	NA	13.8250194
289	11	5080844	5080844	T	C	exonic	OR52E2	NA	nonsynonymous SNV	OR52E2:NM_001005164:exon1:c.A14G:p.N5S	exonic	ENSG00000176787	NA	nonsynonymous SNV	ENSG00000176787:ENST00000321522:exon1:c.A14G:p.N5S	NA	NA	11p15.4	Score=805;Name=V$BRN2_01	NA	NA	NA	rs16909440	0.32	0.32	0.301	0.309105	0.3241	0.3829	0.353	0.1853	0.3538	0.32	0.38	0.39	0.21	0.3369	0.39	0.01	D	0.963	D	0.601	P	0.000	D	0.947	P	2.125	M	-0.07	T	-0.983	T	0.000	T	0.103	2.633	14.76	3.61	1.885	0.736	7.002	2.632936	2.632936	0.01	0.350977	0.220127	NA	0.304	NA	13.8213564
289	22	26157068	26157068	C	G	exonic	MYO18B	NA	nonsynonymous SNV	MYO18B:NM_032608:exon2:c.C9G:p.I3M	exonic	ENSG00000133454	NA	nonsynonymous SNV	ENSG00000133454:ENST00000539302:exon1:c.C9G:p.I3M,ENSG00000133454:ENST00000335473:exon2:c.C9G:p.I3M,ENSG00000133454:ENST00000407587:exon2:c.C9G:p.I3M,ENSG00000133454:ENST00000536101:exon2:c.C9G:p.I3M	Score=521;Name=lod=175	NA	22q12.1	NA	Name=GATA-2	Name=5	NA	rs61734946	0.09	0.09	0.083	0.0770767	0.1839	0.002	0.1225	0.0129	0.0992	0.19	0.0035	0.14	0.02	0.1419	0.19	0	D	0.999	D	0.998	D	0.002	N	0.984	P	1.78	L	-2.59	D	-0.843	T	0.003	T	0.388	3.538	18.05	-0.902	0.029	0.036	2.609	3.537953	3.537953	0	0.189309	0.040301	NA	0.058	NA	13.8182244
290	17	78073485	78073485	G	A	exonic	CCDC40	NA	nonsynonymous SNV	CCDC40:NM_017950:exon20:c.G3340A:p.V1114M	exonic	ENSG00000141519	NA	nonsynonymous SNV	ENSG00000141519:ENST00000397545:exon20:c.G3340A:p.V1114M	NA	NA	17q25.3	Score=773;Name=V$PAX2_01	NA	NA	NA	rs61740509	0.02	0.02	0.005	0.0133786	0.007	0.001	0.0778	0.0008	0.0041	0.01	0.0017	0.07	0.002	0.0119	0.07	0.07	T	0.99	D	0.814	P	.	.	0.992	N	1.935	M	0.68	T	-1.120	T	0.021	T	0.503	3.057	16.2	2.42	1.239	0.732	6.333	3.056628	3.056628	0.29	0.002381	0.001213	NA	0.007	CLINSIG=unknown;CLNDBN=not_provided;CLNREVSTAT=single;CLNACC=RCV000081928.1;CLNDSDB=.;CLNDSDBID=.	13.8120524
291	1	45795084	45795084	G	A	exonic	MUTYH	NA	nonsynonymous SNV	MUTYH:NM_001048171:exon16:c.C1502T:p.S501F,MUTYH:NM_001048172:exon16:c.C1463T:p.S488F,MUTYH:NM_001048173:exon16:c.C1460T:p.S487F,MUTYH:NM_001048174:exon16:c.C1460T:p.S487F,MUTYH:NM_001128425:exon16:c.C1544T:p.S515F,MUTYH:NM_012222:exon16:c.C1535T:p.S512F	exonic	ENSG00000132781	NA	nonsynonymous SNV	ENSG00000132781:ENST00000488731:exon7:c.C545T:p.S182F,ENSG00000132781:ENST00000528332:exon7:c.C587T:p.S196F,ENSG00000132781:ENST00000529984:exon7:c.C545T:p.S182F,ENSG00000132781:ENST00000354383:exon16:c.C1463T:p.S488F,ENSG00000132781:ENST00000355498:exon16:c.C1460T:p.S487F,ENSG00000132781:ENST00000372098:exon16:c.C1535T:p.S512F,ENSG00000132781:ENST00000372100:exon16:c.C1493T:p.S498F,ENSG00000132781:ENST00000372110:exon16:c.C1505T:p.S502F,ENSG00000132781:ENST00000372115:exon16:c.C1502T:p.S501F,ENSG00000132781:ENST00000448481:exon16:c.C1493T:p.S498F,ENSG00000132781:ENST00000450313:exon16:c.C1544T:p.S515F,ENSG00000132781:ENST00000456914:exon16:c.C1460T:p.S487F,ENSG00000132781:ENST00000372104:exon17:c.C1460T:p.S487F	NA	NA	1p34.1	Score=824;Name=V$HEN1_01	Name=BAF155,Pol2	Name=19	NA	rs140118273	0.0046	0.0046	0.007	0.00459265	0.008	NA	0.0086	0.0038	0.0041	0.01	NA	0.01	0.0041	0.0079	0.022	0.04	D	0.908	P	0.351	B	0.638	N	1.000	N	1.1	L	-0.34	T	-0.963	T	0.131	T	0.244	0.728	7.869	0.173	-0.048	1.741	6.802	0.727764	NA	0.03	0.012558	0.008171	NA	0.022	CLINSIG=non-pathogenic|non-pathogenic|untested|non-pathogenic;CLNDBN=not_provided|MYH-associated_polyposis|not_specified|Neoplastic_Syndromes\x2c_Hereditary;CLNREVSTAT=mult|single|not|single;CLNACC=RCV000034672.2|RCV000119200.1|RCV000121601.1|RCV000132436.1;CLNDSDB=.|GeneReviews:MedGen:OMIM:Orphanet|.|MedGen;CLNDSDBID=.|NBK107219:C1837991:608456:ORPHA220460|.|C0027672	13.8048754
291	3	12857493	12857493	C	T	exonic	CAND2	NA	nonsynonymous SNV	CAND2:NM_012298:exon7:c.C1148T:p.P383L,CAND2:NM_001162499:exon9:c.C1427T:p.P476L	exonic	ENSG00000144712	NA	nonsynonymous SNV	ENSG00000144712:ENST00000295989:exon7:c.C1148T:p.P383L,ENSG00000144712:ENST00000456430:exon9:c.C1427T:p.P476L	Score=401;Name=lod=57	NA	3p25.2	NA	Name=Rad21,CTCF	Name=4	NA	rs2305397	0.37	0.37	0.376	0.322883	0.5775	0.1766	0.366	0.3154	0.1912	0.57	0.15	0.34	0.33	0.4258	0.57	0.11	T	0.137	B	0.147	B	0.000	D	0.000	P	2.105	M	2.79	T	-0.928	T	0.000	T	0.204	1.841	12.11	5.12	2.395	5.984	16.085	1.841013	1.841013	0.18	0.525938	0.346267	ID=COSM1418693,COSM1418692;OCCURENCE=1(large_intestine)	0.406	NA	13.8040954
291	20	25262769	25262769	G	A	exonic	PYGB	NA	nonsynonymous SNV	PYGB:NM_002862:exon12:c.G1504A:p.D502N	exonic	ENSG00000100994	NA	nonsynonymous SNV	ENSG00000100994:ENST00000216962:exon12:c.G1504A:p.D502N	Score=284;Name=lod=19	NA	20p11.21	NA	Name=HA-E2F1	NA	NA	rs2227891	0.19	0.19	0.165	0.162141	0.1849	0.3502	0.1297	0.0514	0.1176	0.19	0.34	0.16	0.05	0.1672	0.34	0.2	T	0.009	B	0.012	B	0.000	D	0.000	P	1.2	L	-3.18	D	-1.124	T	0.000	T	0.172	2.449	14.15	3.93	2.182	7.572	16.101	2.448638	2.448638	0.14	0.185276	0.079318	NA	0.094	NA	13.7959574
292	20	36993333	36993333	A	G	exonic	LBP	NA	nonsynonymous SNV	LBP:NM_004139:exon8:c.A848G:p.D283G	exonic	ENSG00000129988	NA	nonsynonymous SNV	ENSG00000129988:ENST00000217407:exon8:c.A848G:p.D283G	NA	NA	20q11.23	NA	NA	NA	NA	rs2232607	0.01	0.01	0.01	0.00459265	0.0129	NA	0.0058	0.0023	0.0031	0.01	NA	0.01	0.0041	0.0112	0.017	0.01	D	0.987	D	0.842	P	0.023	N	1.000	N	2.54	M	2.4	T	-1.054	T	0.051	T	0.259	1.84	12.11	4.46	1.129	1.925	9.510	1.840067	1.840067	0.01	0.016744	0.003404	NA	NA	NA	13.7924894
292	1	19596124	19596124	C	T	ncRNA_exonic	AKR7L	NA	NA	NA	exonic	ENSG00000211454	NA	unknown	UNKNOWN	Score=567;Name=lod=268	NA	1p36.13	Score=808;Name=V$CEBP_C	Name=CTCF	NA	NA	rs2235794	0.66	0.66	0.625	0.664936	0.6918	0.8016	0.7334	0.3964	0.8108	0.68	0.81	0.72	0.41	0.6867	0.81	0.01	D	1.0	D	0.997	D	0.000	D	0.000	P	.	.	.	.	-0.962	T	0.000	T	0.414	4.145	21.4	3.88	2.161	7.077	14.909	4.144836	4.144836	NA	0.663419	0.434249	NA	0.428	NA	13.7914143
292	7	151680072	151680072	T	C	exonic	GALNTL5	NA	nonsynonymous SNV	GALNTL5:NM_145292:exon4:c.T370C:p.C124R	exonic	ENSG00000106648	NA	nonsynonymous SNV	ENSG00000106648:ENST00000392800:exon4:c.T370C:p.C124R,ENSG00000106648:ENST00000431418:exon5:c.T370C:p.C124R	Score=300;Name=lod=22	NA	7q36.1	NA	NA	NA	NA	rs6960270	0.83	0.83	0.805	0.801118	0.8449	0.8403	0.8602	0.739	0.7577	0.86	0.8	0.86	0.78	0.8414	0.86	0	D	1.0	D	0.997	D	0.000	D	0.000	P	2.89	M	0.32	T	-1.019	T	0.000	T	0.316	3.978	20.4	4.65	2.056	3.525	12.349	3.97756	3.97756	0.01	0.855814	0.748071	NA	0.812	NA	13.7912194
292	2	168931636	168931636	C	T	exonic	STK39	NA	nonsynonymous SNV	STK39:NM_013233:exon11:c.G1195A:p.A399T	exonic	ENSG00000198648	NA	nonsynonymous SNV	ENSG00000198648:ENST00000355999:exon11:c.G1195A:p.A399T	Score=624;Name=lod=457	NA	2q24.3	NA	NA	NA	NA	rs56031549	0.01	0.01	0.006	0.00638978	0.0169	NA	0.0159	NA	0.0041	0.01	NA	0.03	NA	0.0108	0.03	0.25	T	0.599	P	0.266	B	0.000	D	1.000	D	1.7	L	-0.74	T	-0.703	T	0.146	T	0.25	4.874	27.9	5.58	2.638	5.930	14.417	4.874365	4.874365	0.04	0.01442	0.002011	NA	NA	NA	13.7912134
292	19	15853080	15853080	G	A	exonic	OR10H3	NA	nonsynonymous SNV	OR10H3:NM_013938:exon1:c.G878A:p.S293N	exonic	ENSG00000171936	NA	nonsynonymous SNV	ENSG00000171936:ENST00000305892:exon1:c.G878A:p.S293N	Score=403;Name=lod=58	NA	19p13.12	NA	NA	NA	NA	rs2240229	0.15	0.15	0.146	0.157348	0.169	0.122	0.111	0.1505	0.2239	0.17	0.14	0.1	0.16	0.1877	0.2	0.01	D	1.0	D	0.999	D	0.031	U	0.949	P	3.39	M	1.1	T	-0.992	T	0.001	T	0.144	1.583	11.25	2.37	1.330	0.941	10.392	1.582703	1.582703	0.01	0.188721	0.173854	NA	0.181	NA	13.7879124
293	6	30890483	30890483	G	T	exonic	VARS2	NA	nonsynonymous SNV	VARS2:NM_001167733:exon21:c.G1618T:p.V540L,VARS2:NM_001167734:exon22:c.G2128T:p.V710L,VARS2:NM_020442:exon22:c.G2038T:p.V680L	exonic	ENSG00000137411	NA	nonsynonymous SNV	ENSG00000137411:ENST00000321897:exon21:c.G2038T:p.V680L,ENSG00000137411:ENST00000542001:exon21:c.G1618T:p.V540L,ENSG00000137411:ENST00000416670:exon22:c.G2038T:p.V680L,ENSG00000137411:ENST00000541562:exon22:c.G2128T:p.V710L	Score=504;Name=lod=149	NA	6p21.33	Score=967;Name=V$LMO2COM_01	Name=CTCF	Name=15	NA	rs2074506	0.24	0.24	0.245	0.222045	0.3559	0.247	0.2075	0.0983	0.2362	0.35	0.28	0.2	0.06	0.324	0.38	0.14	T	0.594	P	0.283	B	0.002	N	0.000	P	0.95	L	3.56	T	-0.906	T	0.010	T	0.262	2.058	12.84	5.31	2.505	3.911	16.462	2.057783	2.057783	0.31	0.376616	0.145792	NA	0.283	NA	13.7768174
294	6	29407970	29407970	T	C	exonic	OR10C1	NA	nonsynonymous SNV	OR10C1:NM_013941:exon1:c.T178C:p.F60L	exonic	ENSG00000206474	NA	nonsynonymous SNV	ENSG00000206474:ENST00000444197:exon1:c.T178C:p.F60L	Score=443;Name=lod=84	NA	6p22.1	Score=864;Name=V$NKX3A_01	NA	NA	NA	rs2074469	0.18	0.18	0.162	0.178714	0.1839	0.249	0.245	0.0756	0.1933	0.19	0.24	0.24	0.07	0.19	0.24	0.07	T	0.997	D	0.995	D	0.002	U	0.000	P	2.05	M	6.65	T	-0.668	T	0.003	T	0.133	2.177	13.24	3.6	1.634	0.455	12.35	2.177007	2.177007	NA	0.187846	0.083388	NA	0.152	NA	13.7715874
294	2	98373842	98373842	A	T	exonic	TMEM131	NA	nonsynonymous SNV	TMEM131:NM_015348:exon41:c.T5372A:p.V1791D	exonic	ENSG00000075568	NA	nonsynonymous SNV	ENSG00000075568:ENST00000186436:exon41:c.T5372A:p.V1791D	Score=321;Name=lod=27	NA	2q11.2	Score=790;Name=V$MIF1_01	NA	NA	NA	rs149630938	0.01	0.01	0.009	0.0123802	0.0239	NA	0.0216	0.0166	0.001	0.02	NA	0.02	0.02	0.0175	0.023	0.13	T	0.731	P	0.241	B	0.001	N	1.000	D	0	N	1.31	T	-1.086	T	0.027	T	0.085	3.244	16.88	5.48	2.304	8.012	15.729	3.243662	3.243662	0	0.022781	0.014971	NA	0.007	NA	13.7691524
295	20	46365636	46365636	C	T	exonic	SULF2	NA	nonsynonymous SNV	SULF2:NM_001161841:exon3:c.G226A:p.A76T,SULF2:NM_018837:exon3:c.G226A:p.A76T,SULF2:NM_198596:exon3:c.G226A:p.A76T	exonic	ENSG00000196562	NA	nonsynonymous SNV	ENSG00000196562:ENST00000359930:exon3:c.G226A:p.A76T,ENSG00000196562:ENST00000361612:exon3:c.G226A:p.A76T,ENSG00000196562:ENST00000437955:exon3:c.G226A:p.A76T,ENSG00000196562:ENST00000467815:exon3:c.G226A:p.A76T,ENSG00000196562:ENST00000484875:exon3:c.G226A:p.A76T	Score=628;Name=lod=474	NA	20q13.12	Score=915;Name=V$SP1_Q6	NA	NA	NA	rs56218501	0.1	0.1	0.1	0.0776757	0.2167	0.001	0.1354	0.0061	0.0695	0.21	NA	0.17	0.0041	0.143	0.21	0.31	T	0.002	B	0.004	B	0.000	D	0.003	P	-0.03	N	-4.94	D	-0.815	T	0.003	T	0.172	2.362	13.86	5.44	2.559	2.973	8.508	2.362478	2.362478	0.31	0.214884	0.03813	ID=COSM1412272;OCCURENCE=1(large_intestine)	0.138	NA	13.7587494
296	3	137849888	137849888	C	T	exonic	A4GNT	NA	nonsynonymous SNV	A4GNT:NM_016161:exon2:c.G211A:p.V71I	exonic	ENSG00000118017	NA	nonsynonymous SNV	ENSG00000118017:ENST00000236709:exon2:c.G211A:p.V71I	Score=428;Name=lod=73	NA	3q22.3	NA	NA	NA	NA	rs79791762	0.02	0.02	0.013	0.0121805	0.0318	0.004	0.0216	0.0038	0.0051	0.03	0.0017	0.03	0.01	0.0205	0.03	0.62	T	0.993	D	0.62	P	0.002	N	0.725	D	1.355	L	-0.87	T	-0.614	T	0.136	T	0.07	2.313	13.69	4.55	1.281	3.791	10.331	2.312966	2.312966	0.18	0.027674	0.007717	NA	NA	NA	13.7533594
296	11	130784396	130784396	G	A	exonic	SNX19	NA	nonsynonymous SNV	SNX19:NM_014758:exon1:c.C1439T:p.P480L	exonic	ENSG00000120451	NA	nonsynonymous SNV	ENSG00000120451:ENST00000265909:exon1:c.C1439T:p.P480L,ENSG00000120451:ENST00000533214:exon1:c.C1439T:p.P480L	Score=272;Name=lod=17	NA	11q24.3	NA	NA	NA	NA	rs62621284	0.14	0.14	0.136	0.127596	0.1988	0.1538	0.0893	0.0492	0.1605	0.2	0.17	0.1	0.05	0.1752	0.21	0.37	T	1.0	D	0.978	D	0.022	N	0.000	P	2.075	M	2.51	T	-1.163	T	0.000	T	0.526	3.042	16.15	5.63	2.660	6.284	17.854	3.041915	3.041915	0.01	0.208052	0.071558	NA	0.217	NA	13.7512814
297	6	36287312	36287312	G	C	exonic	C6orf222	NA	nonsynonymous SNV	C6orf222:NM_001010903:exon11:c.C1744G:p.L582V	exonic	ENSG00000189325	NA	nonsynonymous SNV	ENSG00000189325:ENST00000437635:exon11:c.C1744G:p.L582V	NA	NA	6p21.31	NA	Name=Max,c-Myc,CTCF,ZNF263	Name=8	NA	rs743852	0.39	0.39	0.379	0.388379	0.5596	0.2183	0.3689	0.3737	0.4213	0.55	0.19	0.38	0.39	0.4756	0.56	0.02	D	1.0	D	0.993	D	0.002	N	0.993	P	2.42	M	0.02	T	-0.454	T	0.289	T	0.21	3.704	18.82	3.6	1.398	0.853	7.043	3.704316	3.704316	NA	0.556163	0.397186	NA	0.449	NA	13.7419704
297	21	43510437	43510437	A	G	exonic	UMODL1	NA	nonsynonymous SNV	UMODL1:NM_001004416:exon6:c.A820G:p.N274D,UMODL1:NM_001199527:exon6:c.A604G:p.N202D,UMODL1:NM_001199528:exon6:c.A604G:p.N202D,UMODL1:NM_173568:exon6:c.A820G:p.N274D	exonic	ENSG00000177398	NA	nonsynonymous SNV	ENSG00000177398:ENST00000400424:exon6:c.A604G:p.N202D,ENSG00000177398:ENST00000400427:exon6:c.A604G:p.N202D,ENSG00000177398:ENST00000408910:exon6:c.A820G:p.N274D,ENSG00000177398:ENST00000408989:exon6:c.A820G:p.N274D	NA	NA	21q22.3	NA	NA	NA	NA	rs17114359	NA	NA	NA	0.0790735	0.0467	NA	0.0331	0.2148	0.0429	NA	NA	NA	NA	0.0486	0.11	0.04	D	0.983	D	0.79	P	0.878	N	1.000	P	0.695	N	-2.96	D	0.127	D	0.695	D	0.114	1.714	11.69	1.51	0.188	1.864	8.693	1.714101	1.714101	0.11	NA	NA	NA	0.08	NA	13.7380334
297	12	48501161	48501161	A	T	exonic	PFKM	NA	nonsynonymous SNV	PFKM:NM_001166686:exon2:c.A5T:p.H2L	exonic	ENSG00000152556	NA	nonsynonymous SNV	ENSG00000152556:ENST00000340802:exon2:c.A5T:p.H2L,ENSG00000152556:ENST00000546755:exon2:c.A5T:p.H2L,ENSG00000152556:ENST00000547581:exon2:c.A5T:p.H2L,ENSG00000152556:ENST00000548288:exon2:c.A5T:p.H2L,ENSG00000152556:ENST00000549366:exon2:c.A5T:p.H2L,ENSG00000152556:ENST00000552792:exon2:c.A5T:p.H2L	Score=441;Name=lod=83	NA	12q13.11	Score=809;Name=V$BRN2_01	Name=PAX5-C20,PAX5-N19	Name=9	NA	rs11609399	0.35	0.35	0.318	0.35623	0.162	0.6468	0.4568	0.233	0.3517	0.16	0.6	0.45	0.27	0.2663	0.6	0.05	D	.	.	.	.	0.209	N	0.000	P	0	N	-1.33	T	-0.924	T	0.000	T	0.131	1.036	9.231	-2.34	-0.434	-1.232	8.661	1.035795	NA	0	0.169877	0.227679	NA	0.203	NA	13.7351564
298	17	26096597	26096597	G	A	exonic	NOS2	NA	nonsynonymous SNV	NOS2:NM_000625:exon16:c.C1823T:p.S608L	exonic	ENSG00000007171	NA	nonsynonymous SNV	ENSG00000007171:ENST00000313735:exon16:c.C1823T:p.S608L	Score=458;Name=lod=97	NA	17q11.2	Score=816;Name=V$GFI1_01	NA	NA	NA	rs2297518	0.17	0.17	0.145	0.165335	0.2316	0.1518	0.1744	0.1271	0.1564	0.23	0.13	0.19	0.13	0.1777	0.23	0.16	T	0.918	P	0.623	P	0.001	D	0.001	P	1.315	L	-0.83	T	-1.190	T	0.000	T	0.198	3.41	17.52	5.27	2.464	6.204	17.460	3.409541	3.409541	0.05	0.195349	0.113482	NA	0.174	NA	13.7286844
298	12	123806219	123806219	C	T	exonic	SBNO1	NA	nonsynonymous SNV	SBNO1:NM_001167856:exon16:c.G2186A:p.S729N,SBNO1:NM_018183:exon16:c.G2183A:p.S728N	exonic	ENSG00000139697	NA	nonsynonymous SNV	ENSG00000139697:ENST00000267176:exon16:c.G2183A:p.S728N,ENSG00000139697:ENST00000420886:exon16:c.G2186A:p.S729N,ENSG00000139697:ENST00000602398:exon17:c.G2186A:p.S729N,ENSG00000139697:ENST00000602750:exon17:c.G2183A:p.S728N	Score=594;Name=lod=346	NA	12q24.31	NA	NA	NA	NA	rs1060105	0.13	0.13	0.121	0.124601	0.2227	0.002	0.1888	0.0514	0.2035	0.23	NA	0.19	0.06	0.187	0.23	0.48	T	0.981	D	0.943	D	0.000	D	0.000	P	1.39	L	1.45	T	-1.120	T	0.000	T	0.063	4.065	20.9	5.48	2.551	6.921	19.361	4.064827	4.064827	0.17	0.197442	0.082388	NA	0.145	NA	13.7261914
299	11	51516000	51516000	C	T	exonic	OR4C46	NA	nonsynonymous SNV	OR4C46:NM_001004703:exon1:c.C719T:p.S240F	exonic	ENSG00000185926	NA	nonsynonymous SNV	ENSG00000185926:ENST00000328188:exon1:c.C719T:p.S240F	Score=397;Name=lod=55	NA	11p11.12	NA	NA	NA	NA	rs11246607	0.47	0.47	0.434	0.433307	0.5467	0.5427	0.5893	0.202	0.4059	0.56	0.53	0.6	0.16	0.5183	0.6	0.01	D	0.884	P	0.68	P	0.000	D	0.917	P	3.045	M	1.1	T	-0.903	T	0.000	T	0.264	1.461	10.83	2.33	1.345	5.273	10.462	1.460606	1.460606	0.01	0.545624	0.261018	NA	0.341	NA	13.7227094
299	12	56814653	56814653	G	A	exonic	TIMELESS	NA	nonsynonymous SNV	TIMELESS:NM_003920:exon25:c.C3053T:p.P1018L	exonic	ENSG00000111602	NA	nonsynonymous SNV	ENSG00000111602:ENST00000554616:exon15:c.C1544T:p.P515L,ENSG00000111602:ENST00000229201:exon25:c.C3050T:p.P1017L,ENSG00000111602:ENST00000553532:exon25:c.C3053T:p.P1018L	Score=436;Name=lod=79	NA	12q13.3	NA	NA	NA	NA	rs2291739	0.42	0.42	0.436	0.391573	0.5636	0.2768	0.3703	0.3124	0.455	0.56	0.32	0.4	0.32	0.4924	0.56	0.06	T	1.0	D	0.977	D	0.000	D	0.000	P	1.955	M	2.69	T	-0.871	T	0.000	T	0.808	3.541	18.07	5.4	2.708	9.170	18.318	3.54119	3.54119	0.1	0.556512	0.35429	NA	0.464	NA	13.7208214
300	12	48919659	48919659	T	C	exonic	OR8S1	NA	nonsynonymous SNV	OR8S1:NM_001005203:exon1:c.T245C:p.L82P	exonic	ENSG00000197376	NA	nonsynonymous SNV	ENSG00000197376:ENST00000310194:exon1:c.T245C:p.L82P	Score=278;Name=lod=18	NA	12q13.11	NA	NA	NA	NA	rs4075258	0.54	0.54	0.553	0.578275	0.5139	0.6905	0.6599	0.4849	0.5971	0.44	0.71	0.62	0.46	0.5744	0.71	0	D	1.0	D	0.992	D	0.006	N	0.000	P	3.885	H	7.41	T	-1.097	T	0.000	T	0.485	3.831	19.46	5.03	2.105	4.302	12.762	3.831371	3.831371	0	0.53093	0.495461	NA	0.246	NA	13.7141034
300	10	44052903	44052903	A	C	exonic	ZNF239	NA	nonsynonymous SNV	ZNF239:NM_001099283:exon2:c.T625G:p.C209G,ZNF239:NM_005674:exon2:c.T625G:p.C209G,ZNF239:NM_001099284:exon3:c.T625G:p.C209G,ZNF239:NM_001099282:exon4:c.T625G:p.C209G	exonic	ENSG00000196793	NA	nonsynonymous SNV	ENSG00000196793:ENST00000306006:exon2:c.T625G:p.C209G,ENSG00000196793:ENST00000535642:exon2:c.T625G:p.C209G,ENSG00000196793:ENST00000426961:exon3:c.T625G:p.C209G,ENSG00000196793:ENST00000374446:exon4:c.T625G:p.C209G	Score=284;Name=lod=19	NA	10q11.21	NA	Name=SETDB1	NA	NA	rs2230661	0.52	0.52	0.499	0.544928	0.5308	0.5506	0.513	0.4917	0.6483	0.55	0.57	0.48	0.45	0.5573	0.58	0.01	D	0.998	D	0.991	D	.	.	0.157	P	3.895	H	-0.97	T	-0.961	T	0.000	T	0.314	1.92	12.38	2.88	0.900	4.452	7.281	1.920041	1.920041	0.03	0.534581	0.532512	NA	0.543	NA	13.7106524
301	6	31238909	31238909	G	A	exonic	HLA-C	NA	nonsynonymous SNV	HLA-C:NM_001243042:exon3:c.C560T:p.T187M,HLA-C:NM_002117:exon3:c.C560T:p.T187M	exonic	ENSG00000204525	NA	nonsynonymous SNV	ENSG00000204525:ENST00000376228:exon3:c.C560T:p.T187M,ENSG00000204525:ENST00000383329:exon3:c.C560T:p.T187M	NA	NA	6p21.33	NA	Name=Pol2-4H8	NA	NA	rs1050686	NA	NA	0.01	0.378794	0.3141	0.3641	0.3761	0.413	0.4162	NA	NA	NA	NA	0.3147	NA	0.05	D	0.925	P	0.676	P	0.000	U	1.000	N	3.535	H	5.67	T	-0.885	T	0.004	T	0.575	-0.666	1.083	-5.41	-5.533	-9.317	7.012	-0.666291	NA	0.03	NA	NA	NA	NA	NA	13.7045334
301	5	13811775	13811775	T	C	exonic	DNAH5	NA	nonsynonymous SNV	DNAH5:NM_001369:exon44:c.A7388G:p.Q2463R	exonic	ENSG00000039139	NA	nonsynonymous SNV	ENSG00000039139:ENST00000265104:exon44:c.A7388G:p.Q2463R	Score=414;Name=lod=64	NA	5p15.2	NA	NA	NA	NA	rs10078391	0.28	0.28	0.276	0.262181	0.2147	0.5585	0.1758	0.1884	0.1667	0.22	0.51	0.17	0.2	0.2149	0.51	0.02	D	0.389	B	0.194	B	0.000	D	0.000	P	2.65	M	1.79	T	-0.922	T	0.000	T	0.28	2.73	15.09	5.78	2.204	7.977	16.119	2.730316	2.730316	0.01	0.204767	0.201543	NA	0.261	NA	13.6989664
302	22	30891294	30891294	G	C	exonic	SEC14L4	NA	nonsynonymous SNV	SEC14L4:NM_001161368:exon5:c.C370G:p.R124G,SEC14L4:NM_174977:exon5:c.C370G:p.R124G	exonic	ENSG00000133488	NA	nonsynonymous SNV	ENSG00000133488:ENST00000255858:exon5:c.C370G:p.R124G,ENSG00000133488:ENST00000381982:exon5:c.C370G:p.R124G,ENSG00000133488:ENST00000392772:exon5:c.C208G:p.R70G,ENSG00000133488:ENST00000540456:exon6:c.C325G:p.R109G	Score=355;Name=lod=37	NA	22q12.2	Score=985;Name=V$STAT3_02	NA	NA	NA	rs9606739	0.16	0.16	0.125	0.148562	0.2296	0.0397	0.2839	0.1082	0.136	0.22	0.04	0.23	0.13	0.1953	0.23	0.33	T	0.868	P	0.525	P	0.000	D	0.000	P	1.7	L	-0.99	T	-1.115	T	0.000	T	0.312	1.898	12.3	2.62	1.161	2.707	11.674	1.89792	1.89792	0	0.225233	0.12778	NA	0.065	NA	13.6832004
303	2	223559089	223559089	T	C	exonic	MOGAT1	NA	nonsynonymous SNV	MOGAT1:NM_058165:exon4:c.T487C:p.S163P	exonic	ENSG00000124003	NA	nonsynonymous SNV	ENSG00000124003:ENST00000446656:exon4:c.T487C:p.S163P	Score=361;Name=lod=39	NA	2q36.1	Score=852;Name=V$IRF7_01	NA	NA	NA	rs1868024	0.23	0.23	0.229	0.229832	0.2336	0.1161	0.2349	0.3654	0.1564	0.22	0.11	0.26	0.34	0.2135	0.34	0.37	T	0.022	B	0.104	B	0.000	D	0.000	P	1.025	L	-2.93	D	-1.104	T	0.000	T	0.085	-1.247	0.052	2.96	1.049	2.651	7.694	-1.247371	NA	0.41	0.218391	0.343432	NA	0.232	NA	13.6678424
303	11	60893235	60893235	C	T	exonic	CD5	NA	nonsynonymous SNV	CD5:NM_014207:exon10:c.C1412T:p.A471V	exonic	ENSG00000110448	NA	nonsynonymous SNV	ENSG00000110448:ENST00000347785:exon10:c.C1412T:p.A471V	Score=423;Name=lod=70	NA	11q12.2	NA	NA	NA	NA	rs2229177	0.67	0.67	0.649	0.691094	0.5517	0.9881	0.6628	0.5083	0.7955	0.54	0.99	0.65	0.51	0.6105	0.99	0.01	D	1.0	D	0.952	D	0.000	D	0.010	P	1.04	L	1.49	T	-1.050	T	0.000	T	0.227	4.129	21.3	5.01	2.313	4.534	16.482	4.129368	4.129368	0	0.503373	0.530413	ID=COSM1355182;OCCURENCE=1(large_intestine)	0.681	NA	13.6677604
303	14	64557734	64557734	A	C	exonic	SYNE2	NA	nonsynonymous SNV	SYNE2:NM_015180:exon60:c.A11944C:p.N3982H,SYNE2:NM_182914:exon60:c.A11944C:p.N3982H	exonic	ENSG00000054654	NA	nonsynonymous SNV	ENSG00000054654:ENST00000394768:exon8:c.A1099C:p.N367H,ENSG00000054654:ENST00000555002:exon11:c.A1846C:p.N616H,ENSG00000054654:ENST00000344113:exon60:c.A11944C:p.N3982H,ENSG00000054654:ENST00000358025:exon60:c.A11944C:p.N3982H,ENSG00000054654:ENST00000554584:exon60:c.A12043C:p.N4015H,ENSG00000054654:ENST00000357395:exon61:c.A1099C:p.N367H	Score=425;Name=lod=71	NA	14q23.2	NA	NA	NA	NA	rs10137972	0.09	0.09	0.098	0.0924521	0.0467	0.0843	0.049	0.1884	0.0491	0.05	0.08	0.05	0.2	0.0659	0.2	0.12	T	0.958	D	0.66	P	0.000	D	0.000	P	1.79	L	4.53	T	-1.097	T	0.000	T	0.079	1.885	12.26	3.42	0.449	5.986	8.450	1.884559	1.884559	0.58	0.055465	0.146391	NA	0.123	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118501.1;CLNDSDB=.;CLNDSDBID=.	13.6652684
304	1	236413230	236413230	T	A	exonic	ERO1LB	NA	nonsynonymous SNV	ERO1LB:NM_019891:exon5:c.A386T:p.D129V	exonic	ENSG00000086619	NA	nonsynonymous SNV	ENSG00000086619:ENST00000327333:exon5:c.A386T:p.D129V,ENSG00000086619:ENST00000354619:exon5:c.A386T:p.D129V,ENSG00000086619:ENST00000366589:exon5:c.A29T:p.D10V	Score=369;Name=lod=42	NA	1q42.3	Score=694;Name=V$PPARG_02	NA	NA	NA	rs2477599	0.35	0.35	0.337	0.335463	0.6014	0.1329	0.3646	0.1354	0.5204	0.62	0.13	0.36	0.15	0.4791	0.62	0.05	D	0.92	P	0.491	P	0.000	D	0.000	P	1.59	L	0.88	T	-0.890	T	0.000	T	0.612	3.236	16.85	4.72	1.025	4.282	11.204	3.23606	3.23606	0.05	0.59597	0.194823	NA	0.341	NA	13.6568634
305	12	53242440	53242440	A	G	exonic	KRT78	NA	nonsynonymous SNV	KRT78:NM_173352:exon1:c.T275C:p.L92P	exonic	ENSG00000170423	NA	nonsynonymous SNV	ENSG00000170423:ENST00000304620:exon1:c.T275C:p.L92P	Score=363;Name=lod=40	NA	12q13.13	NA	NA	NA	NA	rs2013335	0.5	0.5	0.489	0.515375	0.5785	0.5188	0.5519	0.2965	0.7168	0.57	0.53	0.52	0.33	0.5469	0.57	0	D	1.0	D	0.998	D	.	.	0.000	P	3.45	M	-1.2	T	-0.972	T	0.000	T	0.42	3.942	20.2	5.18	2.081	7.510	14.153	3.942107	3.942107	0	0.554186	0.341126	NA	0.493	NA	13.6537474
305	1	111861974	111861974	T	C	exonic	CHIA	NA	nonsynonymous SNV	CHIA:NM_001258002:exon7:c.T578C:p.F193S,CHIA:NM_021797:exon8:c.T737C:p.F246S,CHIA:NM_001040623:exon9:c.T578C:p.F193S,CHIA:NM_001258003:exon9:c.T737C:p.F246S,CHIA:NM_001258001:exon10:c.T737C:p.F246S,CHIA:NM_001258005:exon10:c.T578C:p.F193S,CHIA:NM_001258004:exon11:c.T578C:p.F193S,CHIA:NM_201653:exon11:c.T1061C:p.F354S	exonic	ENSG00000134216	NA	nonsynonymous SNV	ENSG00000134216:ENST00000483391:exon7:c.T578C:p.F193S,ENSG00000134216:ENST00000422815:exon8:c.T893C:p.F298S,ENSG00000134216:ENST00000489524:exon8:c.T578C:p.F193S,ENSG00000134216:ENST00000353665:exon9:c.T578C:p.F193S,ENSG00000134216:ENST00000430615:exon9:c.T737C:p.F246S,ENSG00000134216:ENST00000343320:exon10:c.T1061C:p.F354S,ENSG00000134216:ENST00000451398:exon10:c.T578C:p.F193S,ENSG00000134216:ENST00000369740:exon11:c.T1061C:p.F354S	Score=548;Name=lod=224	NA	1p13.2	NA	Name=NFKB	NA	NA	rs2275254	0.43	0.43	0.454	0.442292	0.5954	0.38	0.3098	0.3154	0.6145	0.62	0.33	0.38	0.31	0.5082	0.62	0.02	D	1.0	D	0.997	D	0.099	N	0.215	P	3.275	M	3.4	T	-1.055	T	0.046	T	0.529	2.522	14.39	3.8	0.796	3.465	9.355	2.521585	2.521585	0.05	0.576279	0.34975	NA	0.464	NA	13.6534544
305	13	41495618	41495618	C	G	ncRNA_exonic	SUGT1P3	NA	NA	NA	ncRNA_exonic	ENSG00000168852,ENSG00000239827	NA	NA	NA	Score=423;Name=lod=70	NA	13q14.11	Score=807;Name=V$AHR_01	Name=Pol2(b),Pol2-4H8,Rad21,CTCF,TAF1,GATA-1,Pol2	Name=116	NA	rs149467900	0.01	0.01	0.003	0.00359425	0.0089	NA	0.0029	0.0008	0.0061	0.01	NA	0.0028	0.002	0.0093	0.01	0	D	.	.	.	.	.	.	0.970	N	.	.	.	.	-0.918	T	0.134	T	0.811	2.664	14.87	3.26	2.117	1.333	12.283	2.66411	2.66411	0	NA	NA	NA	NA	NA	13.6484666
306	7	138602916	138602916	G	C	exonic	KIAA1549	NA	nonsynonymous SNV	KIAA1549:NM_001164665:exon2:c.C1456G:p.P486A,KIAA1549:NM_020910:exon2:c.C1456G:p.P486A	exonic	ENSG00000122778	NA	nonsynonymous SNV	ENSG00000122778:ENST00000242365:exon1:c.C1306G:p.P436A,ENSG00000122778:ENST00000422774:exon2:c.C1456G:p.P486A,ENSG00000122778:ENST00000440172:exon2:c.C1456G:p.P486A	Score=309;Name=lod=24	NA	7q34	NA	NA	NA	NA	rs2718131	0.22	0.22	0.226	0.210463	0.2555	0.0655	0.1556	0.388	0.1125	0.25	0.08	0.15	0.4	0.215	0.4	0.18	T	1.0	D	0.998	D	0.000	D	0.001	P	1.04	L	0.21	T	-0.975	T	0.000	T	0.357	2.425	14.07	4.58	2.388	4.557	14.706	2.42482	2.42482	0.04	0.230065	0.36266	NA	0.261	NA	13.6327684
306	19	19329924	19329924	C	T	exonic	NCAN	NA	nonsynonymous SNV	NCAN:NM_004386:exon3:c.C274T:p.P92S	exonic	ENSG00000130287	NA	nonsynonymous SNV	ENSG00000130287:ENST00000252575:exon3:c.C274T:p.P92S	Score=536;Name=lod=201	NA	19p13.11	NA	NA	NA	NA	rs2228603	0.05	0.05	0.042	0.0439297	0.0676	0.0556	0.0231	0.0061	0.0736	0.07	0.06	0.02	0.01	0.0643	0.074	0.72	T	0.957	D	0.752	P	0.002	N	1.000	D	0.315	N	4.33	T	-0.601	T	0.001	T	0.039	2.382	13.92	4.66	2.119	1.319	15.042	2.382116	2.382116	0.23	0.07407	0.013845	ID=COSM439006,COSM439007;OCCURENCE=2(breast)	0.051	NA	13.6273634
306	1	151062957	151062957	G	A	exonic	GABPB2	NA	nonsynonymous SNV	GABPB2:NM_144618:exon3:c.G184A:p.V62I	exonic	ENSG00000143458	NA	nonsynonymous SNV	ENSG00000143458:ENST00000368916:exon2:c.G184A:p.V62I,ENSG00000143458:ENST00000368917:exon3:c.G184A:p.V62I,ENSG00000143458:ENST00000368918:exon3:c.G184A:p.V62I	Score=585;Name=lod=318	NA	1q21.3	NA	NA	NA	NA	rs11204774	0.06	0.06	0.061	0.0549121	0.0656	NA	0.0346	0.1339	0.0082	0.07	NA	0.03	0.12	0.0602	0.15	0.25	T	0.915	P	0.93	D	0.000	D	0.000	P	0.68	N	1.04	T	-1.059	T	0.114	T	0.343	3.86	19.61	5.46	2.861	9.368	18.097	3.860454	3.860454	0.17	0.081977	0.150931	NA	0.058	NA	13.6255564
307	13	52524488	52524488	T	C	exonic	ATP7B	NA	nonsynonymous SNV	ATP7B:NM_001005918:exon7:c.A2009G:p.K670R,ATP7B:NM_000053:exon10:c.A2495G:p.K832R,ATP7B:NM_001243182:exon11:c.A2162G:p.K721R	exonic	ENSG00000123191	NA	nonsynonymous SNV	ENSG00000123191:ENST00000417240:exon4:c.A311G:p.K104R,ENSG00000123191:ENST00000344297:exon7:c.A2009G:p.K670R,ENSG00000123191:ENST00000448424:exon9:c.A2261G:p.K754R,ENSG00000123191:ENST00000242839:exon10:c.A2495G:p.K832R,ENSG00000123191:ENST00000418097:exon10:c.A2495G:p.K832R,ENSG00000123191:ENST00000400366:exon11:c.A2162G:p.K721R	Score=432;Name=lod=76	NA	13q14.3	NA	NA	NA	NA	rs1061472	0.49	0.49	0.492	0.502396	0.5954	0.4008	0.4769	0.4977	0.5358	0.58	0.4	0.52	0.45	0.5384	0.59	0.09	T	0.954	P	0.789	P	0.000	D	0.000	P	0.16	N	-2.64	D	-0.931	T	0.000	T	0.55	3.417	17.55	5.54	2.107	6.206	15.657	3.416769	3.416769	0.14	0.586337	0.483719	NA	0.464	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=Wilson's_disease|not_specified;CLNREVSTAT=single|single;CLNACC=RCV000029356.1|RCV000078043.1;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet:SNOMED_CT|.;CLNDSDBID=NBK1512:C0019202:277900:ORPHA905:88518009|.	13.6131964
307	3	121415720	121415720	T	C	exonic	GOLGB1	NA	nonsynonymous SNV	GOLGB1:NM_001256488:exon12:c.A3410G:p.Y1137C,GOLGB1:NM_001256486:exon13:c.A3650G:p.Y1217C,GOLGB1:NM_001256487:exon13:c.A3533G:p.Y1178C,GOLGB1:NM_004487:exon13:c.A3635G:p.Y1212C	exonic	ENSG00000173230	NA	nonsynonymous SNV	ENSG00000173230:ENST00000494517:exon12:c.A3527G:p.Y1176C,ENSG00000173230:ENST00000340645:exon13:c.A3635G:p.Y1212C,ENSG00000173230:ENST00000393667:exon13:c.A3650G:p.Y1217C	Score=272;Name=lod=17	NA	3q13.33	NA	NA	NA	NA	rs3732410	0.26	0.26	0.231	0.219848	0.2505	0.4841	0.1585	0.0522	0.1861	0.25	0.47	0.19	0.07	0.2311	0.47	0.17	T	0.999	D	0.969	D	0.000	D	0.154	P	0.975	L	2.09	T	-0.897	T	0.000	T	0.5	1.349	10.43	4.59	2.210	1.966	10.852	1.349415	1.349415	0.24	0.245698	0.074217	NA	0.138	NA	13.6060354
308	22	24468386	24468386	G	A	exonic	CABIN1	NA	nonsynonymous SNV	CABIN1:NM_001201429:exon17:c.G2408A:p.R803Q,CABIN1:NM_001199281:exon18:c.G2558A:p.R853Q,CABIN1:NM_012295:exon18:c.G2558A:p.R853Q	exonic	ENSG00000099991	NA	nonsynonymous SNV	ENSG00000099991:ENST00000405822:exon17:c.G2408A:p.R803Q,ENSG00000099991:ENST00000263119:exon18:c.G2558A:p.R853Q,ENSG00000099991:ENST00000398319:exon18:c.G2558A:p.R853Q	Score=557;Name=lod=244	NA	22q11.23	NA	NA	NA	NA	rs17854874	0.09	0.09	0.089	0.0613019	0.0974	0.1587	0.0317	0.0038	0.0225	0.1	0.17	0.04	0.002	0.0628	0.17	0.31	T	0.996	D	0.638	P	0.000	D	0.000	P	1.845	L	0.34	T	-1.132	T	0.001	T	0.457	3.148	16.53	4.57	2.300	5.903	16.800	3.148196	3.148196	0.08	0.071279	0.015887	NA	0.123	NA	13.6018544
308	15	85448875	85448875	C	A	exonic	SLC28A1	NA	nonsynonymous SNV	SLC28A1:NM_004213:exon8:c.C709A:p.Q237K	exonic	ENSG00000156222	NA	nonsynonymous SNV	ENSG00000156222:ENST00000286749:exon7:c.C709A:p.Q237K,ENSG00000156222:ENST00000538177:exon7:c.C709A:p.Q237K,ENSG00000156222:ENST00000394573:exon8:c.C709A:p.Q237K,ENSG00000156222:ENST00000537216:exon8:c.C709A:p.Q237K,ENSG00000156222:ENST00000537624:exon8:c.C709A:p.Q237K,ENSG00000156222:ENST00000537703:exon8:c.C475A:p.Q159K	Score=446;Name=lod=87	NA	15q25.3	NA	NA	NA	NA	rs8187758	0.25	0.25	0.229	0.300519	0.2366	0.3075	0.3646	0.1573	0.5072	0.24	0.28	0.35	0.16	0.2738	0.35	0.39	T	0.999	D	0.999	D	0.000	D	0.000	P	1.475	L	2.6	T	-0.895	T	0.000	T	0.407	1.292	10.23	4.03	2.240	5.575	11.882	1.292038	1.292038	0.12	0.224006	0.170676	NA	0.29	NA	13.5989274
309	20	10030452	10030452	G	A	exonic	ANKEF1	NA	nonsynonymous SNV	ANKEF1:NM_198798:exon6:c.G1235A:p.G412E,ANKEF1:NM_022096:exon7:c.G1235A:p.G412E	exonic	ENSG00000132623	NA	nonsynonymous SNV	ENSG00000132623:ENST00000378380:exon6:c.G1235A:p.G412E,ENSG00000132623:ENST00000378392:exon7:c.G1235A:p.G412E	Score=441;Name=lod=83	NA	20p12.2	NA	NA	NA	NA	rs524625	0.18	0.18	0.192	0.195687	0.2604	0.0069	0.1556	0.2799	0.2382	0.26	0.01	0.18	0.25	0.2202	0.26	0.33	T	1.0	D	0.973	D	0.000	D	0.000	P	1.625	L	-0.13	T	-1.184	T	0.000	T	0.326	2.006	12.66	5.86	2.937	1.841	20.563	2.005879	2.005879	0.26	0.258785	0.262381	NA	0.159	NA	13.5939484
309	19	14038791	14038791	C	T	exonic	CC2D1A	NA	nonsynonymous SNV	CC2D1A:NM_017721:exon23:c.C2402T:p.T801M	exonic	ENSG00000132024	NA	nonsynonymous SNV	ENSG00000132024:ENST00000318003:exon23:c.C2402T:p.T801M,ENSG00000132024:ENST00000589606:exon23:c.C2402T:p.T801M	Score=405;Name=lod=59	NA	19p13.12	NA	NA	NA	NA	rs2305777	0.15	0.15	0.142	0.125	0.2644	0.0615	0.1816	0.0174	0.1524	0.27	0.07	0.2	0.03	0.2104	0.27	0.16	T	1.0	D	0.992	D	0.001	N	0.015	P	1.185	L	1.98	T	-1.014	T	0.000	T	0.205	3.106	16.38	5.22	2.447	3.945	13.312	3.105779	3.105779	0.13	0.267198	0.043783	NA	0.21	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116591.2;CLNDSDB=.;CLNDSDBID=.	13.5913354
310	11	108040484	108040484	G	T	exonic	NPAT	NA	nonsynonymous SNV	NPAT:NM_002519:exon15:c.C2997A:p.N999K	exonic	ENSG00000149308	NA	nonsynonymous SNV	ENSG00000149308:ENST00000278612:exon15:c.C2997A:p.N999K	Score=468;Name=lod=106	NA	11q22.3	NA	NA	NA	NA	rs34052882	0.04	0.04	0.027	0.0425319	0.0855	0.0119	0.0403	0.0068	0.0798	0.08	0.0035	0.04	0.01	0.0686	0.095	0.01	D	0.925	P	0.439	B	0.000	D	0.992	D	2.175	M	3.55	T	-0.985	T	0.001	T	0.053	3.087	16.31	2.46	0.325	0.827	4.803	3.086852	3.086852	0.03	0.09483	0.018589	NA	0.007	NA	13.5844034
310	7	30795331	30795331	A	G	exonic	INMT	NA	nonsynonymous SNV	INMT:NM_001199219:exon3:c.A653G:p.E218G,INMT:NM_006774:exon3:c.A656G:p.E219G	exonic	ENSG00000241644	NA	nonsynonymous SNV	ENSG00000241644:ENST00000013222:exon3:c.A656G:p.E219G,ENSG00000241644:ENST00000409539:exon3:c.A653G:p.E218G	Score=376;Name=lod=45	NA	7p14.3	NA	Name=p300,CTCF,NRSF	NA	NA	rs2302340	0.39	0.39	0.347	0.329273	0.4294	0.5476	0.5086	0.059	0.2393	0.43	0.55	0.49	0.08	0.404	0.55	0.07	T	0.969	D	0.847	P	0.002	N	0.015	P	2.24	M	2.77	T	-0.926	T	0.000	T	0.298	3.191	16.68	3.67	1.635	3.452	10.601	3.190717	3.190717	0.11	0.41593	0.125511	ID=COSM150255;OCCURENCE=1(stomach)	0.261	NA	13.5840034
310	6	117724379	117724379	C	T	exonic	ROS1	NA	nonsynonymous SNV	ROS1:NM_002944:exon6:c.G500A:p.R167Q	exonic	ENSG00000047936	NA	nonsynonymous SNV	ENSG00000047936:ENST00000368508:exon6:c.G500A:p.R167Q,ENSG00000047936:ENST00000368507:exon7:c.G527A:p.R176Q	Score=473;Name=lod=112	NA	6q22.1	NA	NA	NA	NA	rs2243380	0.06	0.06	0.055	0.0501198	0.0934	0.0407	0.0865	0.0038	0.0521	0.1	0.04	0.09	0.01	0.071	0.1	0.06	T	0.908	P	0.222	B	0.000	D	0.000	P	2.125	M	0.24	T	-0.846	T	0.102	T	0.921	3.881	19.72	4.44	2.687	2.643	9.653	3.880534	3.880534	0.1	0.091744	0.01793	NA	0.101	NA	13.5771894
310	1	201934578	201934578	G	A	exonic	TIMM17A	NA	nonsynonymous SNV	TIMM17A:NM_006335:exon5:c.G337A:p.V113I	exonic	ENSG00000134375	NA	nonsynonymous SNV	ENSG00000134375:ENST00000367287:exon5:c.G337A:p.V113I	Score=524;Name=lod=179	NA	1q32.1	Score=812;Name=V$CDPCR3_01	NA	NA	NA	rs4648	0.06	0.06	0.048	0.0615016	0.0855	0.0377	0.0793	0.0348	0.0849	0.08	0.04	0.08	0.03	0.0794	0.091	0.35	T	0.456	P	0.307	B	0.000	D	0.000	P	0.975	L	1.53	T	-1.083	T	0.004	T	0.178	2.963	15.88	5.36	2.663	6.121	16.925	2.962682	2.962682	0.4	0.091279	0.046074	ID=COSM146732;OCCURENCE=1(stomach)	0.138	NA	13.5771544
311	15	22368862	22368862	G	A	exonic	OR4M2	NA	nonsynonymous SNV	OR4M2:NM_001004719:exon1:c.G287A:p.G96E	exonic	ENSG00000182974	NA	nonsynonymous SNV	ENSG00000182974:ENST00000332663:exon1:c.G287A:p.G96E	NA	NA	15q11.2	NA	Name=GATA3_(SC-268)	NA	NA	rs1835183	0.6	0.6	0.576	NA	NA	NA	NA	NA	NA	0.68	0.6	0.69	0.43	0.6277	0.69	0.04	D	0.97	D	0.735	P	0.000	D	1.000	P	2.42	M	2.95	T	-1.046	T	0.000	T	0.18	2.146	13.13	2.5	1.422	0.394	10.808	2.146421	2.146421	0.01	0.635233	0.41035	NA	0.652	NA	13.5704004
311	4	1018705	1018705	C	A	exonic	FGFRL1	NA	nonsynonymous SNV	FGFRL1:NM_021923:exon6:c.C1085A:p.P362Q,FGFRL1:NM_001004356:exon7:c.C1085A:p.P362Q,FGFRL1:NM_001004358:exon7:c.C1085A:p.P362Q	exonic	ENSG00000127418	NA	nonsynonymous SNV	ENSG00000127418:ENST00000264748:exon6:c.C1085A:p.P362Q,ENSG00000127418:ENST00000504138:exon7:c.C1085A:p.P362Q,ENSG00000127418:ENST00000510644:exon7:c.C1085A:p.P362Q,ENSG00000127418:ENST00000398484:exon8:c.C1085A:p.P362Q	Score=278;Name=lod=18	NA	4p16.3	Score=840;Name=V$RREB1_01	NA	NA	NA	rs4647930	0.14	0.14	0.153	0.136981	0.2674	0.0823	0.1383	0.031	0.2014	0.27	0.07	0.15	0.03	0.2281	0.27	0.16	T	0.105	B	0.03	B	0.000	D	0.000	P	1.355	L	-1.89	D	-1.107	T	0.000	T	0.207	2.615	14.7	3.86	0.988	2.056	11.910	2.614939	2.614939	0.35	0.269688	0.074192	NA	0.138	NA	13.5681454
312	22	18905964	18905964	C	T	exonic	PRODH	NA	nonsynonymous SNV	PRODH:NM_001195226:exon11:c.G968A:p.R323H,PRODH:NM_016335:exon12:c.G1292A:p.R431H	exonic	ENSG00000100033	NA	nonsynonymous SNV	ENSG00000100033:ENST00000334029:exon11:c.G968A:p.R323H,ENSG00000100033:ENST00000357068:exon11:c.G1292A:p.R431H,ENSG00000100033:ENST00000420436:exon11:c.G968A:p.R323H	Score=588;Name=lod=328	NA	22q11.21	NA	NA	NA	NA	rs2904552	0.05	0.05	0.041	0.0429313	0.1054	0.001	0.0576	0.0234	0.0378	0.1	NA	0.05	0.02	0.0794	0.1	0.16	T	0.996	D	0.87	P	0.000	N	0.999	D	2.34	M	1.31	T	-1.182	T	0.006	T	0.184	3.914	19.91	1.16	0.474	1.178	8.739	3.913871	3.913871	0	0.104651	0.036558	NA	0.022	CLINSIG=pathogenic|other;CLNDBN=Proline_dehydrogenase_deficiency|Schizophrenia_4;CLNREVSTAT=single|single;CLNACC=RCV000004224.1|RCV000004225.1;CLNDSDB=MedGen:OMIM:Orphanet:SNOMED_CT|MedGen:OMIM;CLNDSDBID=C0268529:239500:ORPHA419:61071003|C1833247:600850	13.5438824
312	12	95604290	95604290	T	C	exonic	FGD6	NA	nonsynonymous SNV	FGD6:NM_018351:exon2:c.A770G:p.Q257R	exonic	ENSG00000180263	NA	nonsynonymous SNV	ENSG00000180263:ENST00000343958:exon2:c.A770G:p.Q257R,ENSG00000180263:ENST00000546711:exon2:c.A770G:p.Q257R,ENSG00000180263:ENST00000549499:exon2:c.A770G:p.Q257R	NA	NA	12q22	Score=784;Name=V$YY1_02	NA	NA	NA	rs10507047	0.14	0.14	0.122	0.128594	0.0775	0.2331	0.1571	0.0983	0.0941	0.08	0.24	0.16	0.1	0.1173	0.24	0.09	T	0.483	P	0.084	B	0.000	D	1.000	P	1.935	M	-0.45	T	-1.075	T	0.000	T	0.171	0.186	5	4.85	1.093	1.955	7.720	0.185724	NA	0.03	0.097209	0.095778	ID=COSM1128444;OCCURENCE=1(prostate)	0.094	NA	13.5413244
313	9	2718654	2718654	G	A	exonic	KCNV2	NA	synonymous SNV	KCNV2:NM_133497:exon1:c.G915A:p.V305V	exonic	ENSG00000168263	NA	synonymous SNV	ENSG00000168263:ENST00000382082:exon1:c.G915A:p.V305V	Score=600;Name=lod=366	NA	9p24.2	Score=1000;Name=V$USF_C	NA	Name=4	NA	rs7859993	0.03	0.03	0.026	0.0265575	0.0467	NA	0.0317	0.0386	0.0133	0.05	NA	0.04	0.04	0.0356	0.05	0.03	D	.	.	.	.	.	.	1.000	D	.	.	.	.	-0.820	T	0.066	T	.	0.858	8.471	4.18	2.362	0.314	11.425	0.85755	NA	0	0.049895	0.040891	NA	0.022	NA	13.5344716
313	9	35712003	35712003	G	A	exonic	TLN1	NA	nonsynonymous SNV	TLN1:NM_006289:exon28:c.C3680T:p.S1227L	exonic	ENSG00000137076	NA	nonsynonymous SNV	ENSG00000137076:ENST00000314888:exon28:c.C3680T:p.S1227L,ENSG00000137076:ENST00000540444:exon28:c.C3680T:p.S1227L	Score=615;Name=lod=420	NA	9p13.3	Score=916;Name=V$AP1FJ_Q2	Name=ERalpha_a,AP-2gamma,c-Myc	Name=14	NA	rs2295795	0.24	0.24	0.217	0.201478	0.2704	0.3383	0.268	0.0197	0.1881	0.26	0.37	0.28	0.02	0.2498	0.37	0.25	T	0.002	B	0.001	B	0.010	N	0.000	P	1.7	L	2.71	T	-0.915	T	0.000	T	0.356	2.999	16	4.92	1.466	7.695	16.389	2.999336	2.999336	0.2	0.28	0.06355	NA	0.188	NA	13.5331334
314	10	95441272	95441272	G	A	exonic	FRA10AC1	NA	nonsynonymous SNV	FRA10AC1:NM_145246:exon11:c.C752T:p.S251F	exonic	ENSG00000148690	NA	nonsynonymous SNV	ENSG00000148690:ENST00000359204:exon11:c.C752T:p.S251F,ENSG00000148690:ENST00000371430:exon11:c.C752T:p.S251F,ENSG00000148690:ENST00000394100:exon11:c.C752T:p.S251F,ENSG00000148690:ENST00000536233:exon11:c.C752T:p.S251F	Score=403;Name=lod=58	NA	10q23.33	Score=851;Name=V$HAND1E47_01	NA	NA	NA	rs11187583	0.09	0.09	0.067	0.0816693	0.1193	0.0337	0.0965	0.093	0.0665	0.11	0.02	0.13	0.09	0.0932	0.13	0.02	D	0.91	P	0.424	B	0.002	N	0.953	P	1.845	L	1.81	T	-1.107	T	0.001	T	0.223	2.734	15.1	5.17	2.572	4.748	15.746	2.73405	2.73405	0.01	0.113282	0.087421	NA	0.058	NA	13.5075514
315	17	21204210	21204210	C	T	exonic	MAP2K3	NA	stopgain	MAP2K3:NM_002756:exon5:c.C217T:p.Q73X,MAP2K3:NM_145109:exon5:c.C304T:p.Q102X	exonic	ENSG00000034152	NA	stopgain	ENSG00000034152:ENST00000342679:exon5:c.C304T:p.Q102X,ENSG00000034152:ENST00000361818:exon5:c.C217T:p.Q73X,ENSG00000034152:ENST00000496046:exon5:c.C304T:p.Q102X,ENSG00000034152:ENST00000526076:exon5:c.C217T:p.Q73X,ENSG00000034152:ENST00000316920:exon6:c.C217T:p.Q73X	Score=586;Name=lod=320	NA	17p11.2	NA	NA	NA	NA	rs55796947	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.4997	0.5	0.74	T	.	.	.	.	0.000	D	1.000	A	.	.	.	.	.	.	.	.	.	4.876	27.9	5.08	2.359	5.826	18.482	4.876226	4.876226	0.78	NA	NA	NA	0.5	NA	13.5003
316	12	48359984	48359984	C	T	exonic	TMEM106C	NA	nonsynonymous SNV	TMEM106C:NM_001143842:exon5:c.C524T:p.S175F,TMEM106C:NM_024056:exon5:c.C524T:p.S175F	exonic	ENSG00000134291	NA	nonsynonymous SNV	ENSG00000134291:ENST00000552546:exon4:c.C311T:p.S104F,ENSG00000134291:ENST00000429772:exon5:c.C524T:p.S175F,ENSG00000134291:ENST00000546749:exon5:c.C116T:p.S39F,ENSG00000134291:ENST00000552561:exon5:c.C524T:p.S175F	Score=363;Name=lod=40	NA	12q13.11	NA	NA	NA	NA	rs2286025	0.19	0.19	0.162	0.168331	0.1014	0.376	0.3372	0.0038	0.1258	0.11	0.39	0.3	0.01	0.1515	0.39	.	.	0.985	D	0.831	P	0.000	D	0.000	P	1.59	L	2.03	T	-0.903	T	0.000	T	0.494	3.298	17.08	3.47	1.409	3.082	13.808	3.29802	3.29802	0.01	0.099651	0.023831	NA	0.101	NA	13.4807824
316	17	1703543	1703543	G	C	exonic	SMYD4	NA	nonsynonymous SNV	SMYD4:NM_052928:exon5:c.C1145G:p.P382R	exonic	ENSG00000186532	NA	nonsynonymous SNV	ENSG00000186532:ENST00000491788:exon1:c.C557G:p.P186R,ENSG00000186532:ENST00000305513:exon5:c.C1145G:p.P382R	NA	NA	17p13.3	Score=879;Name=V$OCT1_03	NA	NA	NA	rs3809875	0.28	0.28	0.295	0.279353	0.2773	0.1905	0.2305	0.3926	0.2546	0.25	0.21	0.28	0.41	0.2779	0.41	0.51	T	0.986	D	0.936	D	0.016	N	1.000	P	2.105	M	2.92	T	-0.857	T	0.000	T	0.427	1.626	11.4	4.83	2.941	3.500	16.852	1.626284	1.626284	0	0.300349	0.393327	NA	0.391	NA	13.4777844
317	2	88913273	88913273	G	C	exonic	EIF2AK3	NA	nonsynonymous SNV	EIF2AK3:NM_004836:exon2:c.C407G:p.S136C	exonic	ENSG00000172071	NA	nonsynonymous SNV	ENSG00000172071:ENST00000303236:exon2:c.C407G:p.S136C	Score=558;Name=lod=247	NA	2p11.2	Score=828;Name=V$RFX1_01	NA	NA	NA	rs867529	0.29	0.29	0.251	0.280551	0.2982	0.4851	0.3343	0.0166	0.3701	0.29	0.48	0.34	0.02	0.2983	0.48	0.17	T	0.002	B	0.003	B	0.000	D	0.000	P	0.995	L	1.51	T	-0.898	T	0.000	T	0.25	2.527	14.41	5.38	2.507	5.704	19.138	2.527371	2.527371	0.24	0.270233	0.058103	NA	0.196	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116969.2;CLNDSDB=.;CLNDSDBID=.	13.4666004
317	17	65052304	65052304	G	A	exonic	CACNG1	NA	nonsynonymous SNV	CACNG1:NM_000727:exon4:c.G586A:p.G196S	exonic	ENSG00000108878	NA	nonsynonymous SNV	ENSG00000108878:ENST00000226021:exon4:c.G586A:p.G196S	Score=272;Name=lod=17	NA	17q24.2	NA	NA	NA	NA	rs1799938	0.1	0.1	0.083	0.0944489	0.1322	0.0873	0.17	0.0083	0.1258	0.13	0.09	0.15	0.01	0.1196	0.15	0.03	D	0.956	P	0.368	B	0.000	N	0.000	P	2.665	M	-0.5	T	-0.912	T	0.003	T	0.278	3.338	17.23	4.03	1.244	7.606	12.718	3.337553	3.337553	0.03	0.115	0.024739	NA	0.13	NA	13.4665334
318	22	30688659	30688659	C	T	exonic	TBC1D10A	NA	nonsynonymous SNV	TBC1D10A:NM_001204240:exon9:c.G1253A:p.R418H,TBC1D10A:NM_031937:exon9:c.G1232A:p.R411H	exonic	ENSG00000099992	NA	nonsynonymous SNV	ENSG00000099992:ENST00000215790:exon9:c.G1232A:p.R411H,ENSG00000099992:ENST00000403362:exon9:c.G968A:p.R323H,ENSG00000099992:ENST00000403477:exon9:c.G1253A:p.R418H	Score=389;Name=lod=51	NA	22q12.2	NA	NA	NA	NA	rs4823086	0.06	0.06	0.078	0.0453275	0.1461	0.001	0.0692	0.0045	0.0256	0.14	0.0017	0.06	0.0041	0.0909	0.14	0.05	D	0.99	D	0.469	P	0.003	N	0.000	P	1.61	L	3.51	T	-1.019	T	0.000	T	0.2	2.525	14.4	5.51	2.768	1.726	12.190	2.524925	2.524925	0.14	0.136744	0.026101	NA	0.159	NA	13.4595894
318	2	1499899	1499899	C	T	exonic	TPO	NA	synonymous SNV	TPO:NM_175722:exon10:c.C1626T:p.P542P,TPO:NM_001206745:exon11:c.C1974T:p.P658P,TPO:NM_175719:exon11:c.C1974T:p.P658P,TPO:NM_175721:exon11:c.C2145T:p.P715P,TPO:NM_000547:exon12:c.C2145T:p.P715P,TPO:NM_001206744:exon12:c.C2145T:p.P715P	exonic	ENSG00000115705	NA	synonymous SNV	ENSG00000115705:ENST00000469607:exon3:c.C567T:p.P189P,ENSG00000115705:ENST00000422464:exon9:c.C1932T:p.P644P,ENSG00000115705:ENST00000382198:exon10:c.C1626T:p.P542P,ENSG00000115705:ENST00000349624:exon11:c.C1626T:p.P542P,ENSG00000115705:ENST00000382201:exon11:c.C1974T:p.P658P,ENSG00000115705:ENST00000329066:exon12:c.C2145T:p.P715P,ENSG00000115705:ENST00000337415:exon12:c.C2145T:p.P715P,ENSG00000115705:ENST00000345913:exon12:c.C2145T:p.P715P,ENSG00000115705:ENST00000346956:exon12:c.C2145T:p.P715P	NA	NA	2p25.3	Score=839;Name=V$NFKB_Q6	Name=AP-2gamma	Name=7	NA	rs732608	0.42	0.42	0.43	0.438898	0.4016	0.4087	0.4265	0.4349	0.5225	0.39	0.43	0.42	0.46	0.4109	0.46	0	D	.	.	.	.	0.000	D	0.000	P	.	.	-0.65	T	-0.999	T	0.000	T	.	-1.38	0.025	-5.71	-1.146	-1.559	2.751	-1.379854	NA	NA	0.398488	0.441443	ID=COSM1685440;OCCURENCE=1(skin)	0.406	NA	13.4556786
319	2	68607947	68607947	G	T	exonic	PLEK	NA	nonsynonymous SNV	PLEK:NM_002664:exon3:c.G291T:p.K97N	exonic	ENSG00000115956	NA	nonsynonymous SNV	ENSG00000115956:ENST00000234313:exon3:c.G291T:p.K97N	Score=645;Name=lod=555	NA	2p13.3	NA	NA	NA	NA	rs3816281	0.4	0.4	0.381	0.427117	0.2704	0.6885	0.415	0.2958	0.5051	0.28	0.67	0.41	0.27	0.3537	0.67	0.46	T	0.999	D	0.947	D	0.000	D	0.000	P	0.565	N	2.73	T	-1.123	T	0.000	T	0.126	3.329	17.2	4.0	1.469	2.172	9.895	3.328837	3.328837	0.41	0.257093	0.288243	NA	0.333	NA	13.4521404
319	19	10224548	10224548	G	A	exonic	P2RY11,PPAN-P2RY11	NA	nonsynonymous SNV	P2RY11:NM_002566:exon2:c.G259A:p.A87T,PPAN-P2RY11:NM_001040664:exon13:c.G1519A:p.A507T	exonic	ENSG00000130810,ENSG00000243207,ENSG00000244165	NA	nonsynonymous SNV	ENSG00000244165:ENST00000321826:exon2:c.G259A:p.A87T,ENSG00000243207:ENST00000393796:exon13:c.G1519A:p.A507T,ENSG00000130810:ENST00000556468:exon13:c.G1519A:p.A507T	Score=474;Name=lod=113	NA	19p13.2	NA	Name=Pol2,Pol2-4H8	Name=38	NA	rs3745601	0.18	0.18	0.147	0.182508	0.1083	0.3304	0.1585	0.1142	0.2157	0.11	0.34	0.15	0.13	0.1592	0.34	0.39	T	0.992	D	0.788	P	0.670	U	0.000	P	1.46	L	1.17	T	-0.975	T	0.000	T	0.189	3.239	16.86	3.53	2.411	-0.044	11.812	3.239499	3.239499	0.02	0.113747	0.108715	NA	0.08	NA	13.4520864
320	4	189061106	189061106	G	A	exonic	TRIML1	NA	nonsynonymous SNV	TRIML1:NM_178556:exon1:c.G394A:p.E132K	exonic	ENSG00000184108	NA	nonsynonymous SNV	ENSG00000184108:ENST00000332517:exon1:c.G394A:p.E132K	Score=329;Name=lod=29	NA	4q35.2	NA	NA	Name=4	NA	rs13131525	0.29	0.29	0.256	0.255591	0.4672	0.0655	0.4942	0.1157	0.2536	0.47	0.09	0.49	0.11	0.4383	0.5	0.01	D	0.99	D	0.868	P	0.038	N	0.023	P	1.79	L	0.06	T	-0.898	T	0.000	T	0.18	2.188	13.27	4.85	2.625	2.607	14.195	2.187911	2.187911	0.15	0.500581	0.178166	NA	0.333	NA	13.4272524
321	14	88407888	88407888	A	G	exonic	GALC	NA	nonsynonymous SNV	GALC:NM_001201401:exon14:c.T1616C:p.I539T,GALC:NM_000153:exon15:c.T1685C:p.I562T,GALC:NM_001201402:exon15:c.T1607C:p.I536T	exonic	ENSG00000054983	NA	nonsynonymous SNV	ENSG00000054983:ENST00000555000:exon10:c.T1052C:p.I351T,ENSG00000054983:ENST00000393568:exon14:c.T1616C:p.I539T,ENSG00000054983:ENST00000261304:exon15:c.T1685C:p.I562T,ENSG00000054983:ENST00000393569:exon15:c.T1607C:p.I536T,ENSG00000054983:ENST00000544807:exon15:c.T1517C:p.I506T	NA	NA	14q31.3	NA	NA	NA	NA	rs398607	0.43	0.43	0.45	0.447484	0.4881	0.2312	0.379	0.6452	0.41	0.47	0.22	0.4	0.61	0.4406	0.61	0.03	D	0.656	P	0.345	B	0.002	N	0.992	P	1.905	M	-3.33	D	-1.005	T	0.000	T	0.483	3.951	20.2	5.73	2.195	9.270	16.026	3.950939	3.950939	0.04	0.481282	0.614208	NA	0.428	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000078194.1;CLNDSDB=.;CLNDSDBID=.	13.4233514
321	1	151735576	151735576	T	C	exonic	MRPL9	NA	nonsynonymous SNV	MRPL9:NM_031420:exon2:c.A200G:p.E67G	exonic	ENSG00000143436	NA	nonsynonymous SNV	ENSG00000143436:ENST00000368829:exon2:c.A200G:p.E67G,ENSG00000143436:ENST00000368830:exon2:c.A200G:p.E67G	NA	NA	1q21.3	Score=804;Name=V$CEBP_C	Name=CTCF,c-Myc,ELF1_(SC-631),Pol2	Name=39	NA	rs7007	0.13	0.13	0.102	0.122404	0.1322	0.1101	0.121	0.1271	0.1196	0.14	0.1	0.14	0.14	0.1392	0.14	0.12	T	0.937	P	0.347	B	0.008	N	0.000	P	1.955	M	1.36	T	-1.085	T	0.045	T	0.176	2.528	14.41	3.7	0.861	1.076	8.532	2.5278	2.5278	0.21	0.139567	0.116205	NA	0.051	NA	13.4223664
322	6	38729511	38729511	T	C	exonic	DNAH8	NA	nonsynonymous SNV	DNAH8:NM_001206927:exon11:c.T1549C:p.Y517H	exonic	ENSG00000124721	NA	nonsynonymous SNV	ENSG00000124721:ENST00000441566:exon7:c.T898C:p.Y300H,ENSG00000124721:ENST00000359357:exon9:c.T898C:p.Y300H,ENSG00000124721:ENST00000327475:exon10:c.T1513C:p.Y505H,ENSG00000124721:ENST00000449981:exon11:c.T1549C:p.Y517H	Score=559;Name=lod=250	NA	6p21.2	Score=835;Name=V$POU6F1_01	NA	NA	NA	rs61748600	0.1	0.1	0.081	0.0838658	0.1372	0.0198	0.2334	0.0469	0.0389	0.14	0.02	0.22	0.05	0.1288	0.22	0.21	T	0.429	B	0.46	P	0.000	D	0.000	P	1.81	L	0.35	T	-0.865	T	0.141	T	0.322	4.115	21.2	6.0	2.297	4.287	14.031	4.114753	4.114753	0.1	0.15271	0.063323	NA	0.188	NA	13.4146234
322	17	15496727	15496727	T	G	exonic	CDRT1	NA	nonsynonymous SNV	CDRT1:NM_006382:exon11:c.A1930C:p.N644H	exonic	ENSG00000241322	NA	nonsynonymous SNV	ENSG00000241322:ENST00000354433:exon4:c.A430C:p.N144H,ENSG00000241322:ENST00000395906:exon11:c.A1930C:p.N644H	Score=625;Name=lod=464	NA	17p12	NA	NA	NA	NA	rs79385100	0.18	0.18	0.135	0.197085	0.1213	0.2331	0.281	0.1936	0.183	0.13	0.22	0.26	0.17	0.1703	0.26	.	.	0.995	D	0.908	P	.	.	0.000	P	1.905	M	2.13	T	-1.043	T	0.000	T	0.111	3.416	17.55	3.61	1.781	4.784	9.886	3.41643	3.41643	0.01	0.128256	0.188379	NA	0.181	NA	13.4134774
323	20	42747247	42747247	C	T	exonic	JPH2	NA	nonsynonymous SNV	JPH2:NM_020433:exon3:c.G1186A:p.A396T	exonic	ENSG00000149596	NA	nonsynonymous SNV	ENSG00000149596:ENST00000372980:exon3:c.G1186A:p.A396T	Score=510;Name=lod=158	NA	20q13.12	Score=679;Name=V$P53_01	NA	NA	NA	rs3810510	0.24	0.24	0.257	0.270367	0.1163	0.3571	0.1009	0.3933	0.2935	0.11	0.38	0.11	0.38	0.1846	0.38	0.19	T	0.967	D	0.605	P	0.097	N	0.000	P	1.53	L	0.06	T	-1.000	T	0.000	T	0.102	4.195	21.7	3.84	1.005	4.050	11.654	4.194721	4.194721	0.12	0.128953	0.330232	ID=COSM1411944;OCCURENCE=1(large_intestine)	0.319	NA	13.4034804
324	3	41952852	41952852	T	C	exonic	ULK4	NA	nonsynonymous SNV	ULK4:NM_017886:exon11:c.A1042G:p.S348G	exonic	ENSG00000168038	NA	nonsynonymous SNV	ENSG00000168038:ENST00000301831:exon11:c.A1042G:p.S348G,ENSG00000168038:ENST00000420927:exon11:c.A1042G:p.S348G	Score=358;Name=lod=38	NA	3p22.1	NA	NA	NA	NA	rs35263917	0.09	0.09	0.094	0.0840655	0.166	0.002	0.0908	0.0635	0.1074	0.18	0.0035	0.09	0.06	0.1244	0.18	0.03	D	0.917	P	0.437	B	0.275	N	0.000	P	2.175	M	0.42	T	-1.026	T	0.001	T	0.081	4.164	21.5	5.22	1.979	5.411	14.126	4.16415	4.16415	0.01	0.15022	0.077154	NA	0.13	NA	13.3927134
325	8	8234219	8234219	G	A	exonic	SGK223	NA	nonsynonymous SNV	SGK223:NM_001080826:exon2:c.C1700T:p.P567L	exonic	ENSG00000182319	NA	nonsynonymous SNV	ENSG00000182319:ENST00000330777:exon2:c.C1700T:p.P567L,ENSG00000182319:ENST00000520004:exon3:c.C1700T:p.P567L	NA	NA	8p23.1	NA	Name=Pol2	NA	NA	rs4840955	0.41	0.41	0.395	0.453275	0.3002	0.6409	0.4323	0.388	0.5204	0.28	0.64	0.36	0.39	0.3855	0.64	0.05	D	0.123	B	0.023	B	0.000	D	0.422	P	1.935	M	0.23	T	-0.899	T	0.000	T	0.346	2.44	14.12	4.91	2.446	4.250	7.819	2.440334	2.440334	0.21	0.274096	0.319891	NA	NA	NA	13.3735374
325	15	43170793	43170793	A	G	exonic	TTBK2	NA	nonsynonymous SNV	TTBK2:NM_173500:exon2:c.T23C:p.L8P	exonic	ENSG00000128881	NA	nonsynonymous SNV	ENSG00000128881:ENST00000267890:exon2:c.T23C:p.L8P,ENSG00000128881:ENST00000562880:exon2:c.T23C:p.L8P,ENSG00000128881:ENST00000564431:exon2:c.T23C:p.L8P,ENSG00000128881:ENST00000566931:exon2:c.T23C:p.L8P,ENSG00000128881:ENST00000567274:exon2:c.T23C:p.L8P,ENSG00000128881:ENST00000567840:exon2:c.T23C:p.L8P	Score=544;Name=lod=217	NA	15q15.2	NA	Name=TAL1_(SC-12984)	Name=11	NA	rs6493068	0.48	0.48	0.524	0.514776	0.2803	0.4157	0.2867	0.9592	0.4192	0.29	0.42	0.33	0.95	0.3784	0.95	0.35	T	0.0	B	0.0	B	.	.	0.001	P	-0.11	N	1.21	T	-1.008	T	0.000	T	0.364	2.474	14.23	5.29	1.242	5.237	14.210	2.474363	2.474363	0.14	0.303983	0.811663	NA	0.58	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118718.2;CLNDSDB=.;CLNDSDBID=.	13.3706504
326	1	18807938	18807938	C	A	exonic	KLHDC7A	NA	nonsynonymous SNV	KLHDC7A:NM_152375:exon1:c.C463A:p.P155T	exonic	ENSG00000179023	NA	nonsynonymous SNV	ENSG00000179023:ENST00000400664:exon1:c.C463A:p.P155T	NA	NA	1p36.13	Score=913;Name=V$SPZ1_01	Name=PAX5-N19,TCF12,ERalpha_a	Name=11	NA	rs2992754	0.29	0.29	0.263	0.266773	0.1252	0.623	0.2464	0.174	0.1851	0.12	0.62	0.25	0.19	0.2014	0.62	0.47	T	0.845	P	0.421	B	0.242	U	1.000	P	0.345	N	-0.84	T	-0.985	T	0.000	T	0.031	2.785	15.27	5.4	2.680	2.052	16.241	2.784993	2.784993	0.86	0.143434	0.191679	NA	0.167	NA	13.3632994
326	12	121435427	121435427	G	A	exonic	HNF1A	NA	nonsynonymous SNV	HNF1A:NM_000545:exon7:c.G1460A:p.S487N	exonic	ENSG00000135100	NA	nonsynonymous SNV	ENSG00000135100:ENST00000535955:exon2:c.G176A:p.S59N,ENSG00000135100:ENST00000538626:exon2:c.G206A:p.S69N,ENSG00000135100:ENST00000257555:exon7:c.G1460A:p.S487N,ENSG00000135100:ENST00000400024:exon7:c.G1460A:p.S487N,ENSG00000135100:ENST00000541395:exon7:c.G1460A:p.S487N,ENSG00000135100:ENST00000544413:exon7:c.G1460A:p.S487N	Score=586;Name=lod=322	NA	12q24.31	Score=785;Name=V$TAXCREB_02	NA	NA	NA	rs2464196	0.33	0.33	0.309	0.317692	0.3161	0.4732	0.3501	0.112	0.4141	0.31	0.52	0.36	0.11	0.3465	0.52	0.14	T	0.106	B	0.147	B	0.000	N	0.000	P	1.245	L	-4.39	D	-1.097	T	0.000	T	0.098	1.925	12.39	3.53	0.976	1.527	10.495	1.924644	1.924644	0.06	0.311163	0.122787	NA	0.196	CLINSIG=probable-non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000117227.3|RCV000125374.1;CLNDSDB=.|.;CLNDSDBID=.|.	13.3595704
326	11	64026639	64026639	G	A	exonic	PLCB3	NA	nonsynonymous SNV	PLCB3:NM_001184883:exon11:c.G1247A:p.R416H,PLCB3:NM_000932:exon13:c.G1448A:p.R483H	exonic	ENSG00000149782	NA	nonsynonymous SNV	ENSG00000149782:ENST00000325234:exon11:c.G1247A:p.R416H,ENSG00000149782:ENST00000279230:exon13:c.G1448A:p.R483H,ENSG00000149782:ENST00000540288:exon13:c.G1448A:p.R483H	Score=376;Name=lod=45	NA	11q13.1	Score=777;Name=V$E2F_01	NA	NA	NA	rs12146487	0.1	0.1	0.093	0.076877	0.1551	0.0565	0.0836	0.0272	0.0798	0.16	0.07	0.09	0.03	0.1653	0.16	0.14	T	0.983	D	0.782	P	0.001	N	0.000	P	1.245	L	0.62	T	-1.100	T	0.001	T	0.361	4.075	21	4.61	2.112	3.459	9.977	4.074922	4.074922	0.01	0.157612	0.05553	NA	0.116	NA	13.3553214
327	15	98513845	98513845	T	C	exonic	ARRDC4	NA	nonsynonymous SNV	ARRDC4:NM_183376:exon7:c.T1072C:p.S358P	exonic	ENSG00000140450	NA	nonsynonymous SNV	ENSG00000140450:ENST00000268042:exon7:c.T1072C:p.S358P,ENSG00000140450:ENST00000538249:exon7:c.T811C:p.S271P	Score=499;Name=lod=142	NA	15q26.3	NA	NA	Name=3	NA	rs2130882	0.41	0.41	0.397	0.419129	0.4811	0.5486	0.5043	0.0545	0.6544	0.49	0.56	0.48	0.08	0.5021	0.56	0.49	T	0.998	D	0.878	P	0.000	D	0.002	P	1.345	L	3.05	T	-0.998	T	0.000	T	0.304	2.484	14.26	4.35	0.994	3.886	12.081	2.483797	2.483797	0.49	0.507445	0.116295	ID=COSM1375590;OCCURENCE=1(large_intestine)	0.435	NA	13.3426884
328	8	101718987	101718987	G	A	exonic	PABPC1	NA	synonymous SNV	PABPC1:NM_002568:exon11:c.C1494T:p.A498A	exonic	ENSG00000070756	NA	synonymous SNV	ENSG00000070756:ENST00000517990:exon1:c.C21T:p.A7A,ENSG00000070756:ENST00000522658:exon2:c.C135T:p.A45A,ENSG00000070756:ENST00000318607:exon11:c.C1494T:p.A498A,ENSG00000070756:ENST00000519004:exon12:c.C1359T:p.A453A,ENSG00000070756:ENST00000522387:exon12:c.C1398T:p.A466A	Score=624;Name=lod=459	NA	8q22.3	Score=824;Name=V$AP4_01	Name=CTCF_(SC-5916)	Name=2	Score=67;Name=2348421_0_+_67	rs62513923	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.332	NA	.	.	.	.	.	.	.	.	1.000	D	.	.	.	.	-0.946	T	0.162	T	.	1.419	10.68	-2.54	-0.681	0.353	7.045	1.419134	1.419134	NA	NA	NA	NA	NA	NA	13.3346666
328	6	136597281	136597281	A	T	exonic	BCLAF1	NA	nonsynonymous SNV	BCLAF1:NM_001077440:exon5:c.T1376A:p.L459H,BCLAF1:NM_014739:exon5:c.T1382A:p.L461H	exonic	ENSG00000029363	NA	nonsynonymous SNV	ENSG00000029363:ENST00000392348:exon3:c.T1376A:p.L459H,ENSG00000029363:ENST00000353331:exon5:c.T1376A:p.L459H,ENSG00000029363:ENST00000527536:exon5:c.T1382A:p.L461H,ENSG00000029363:ENST00000527613:exon5:c.T1382A:p.L461H,ENSG00000029363:ENST00000527759:exon5:c.T1376A:p.L459H,ENSG00000029363:ENST00000529826:exon5:c.T1382A:p.L461H,ENSG00000029363:ENST00000530429:exon5:c.T1376A:p.L459H,ENSG00000029363:ENST00000531224:exon5:c.T1382A:p.L461H,ENSG00000029363:ENST00000532384:exon5:c.T1382A:p.L461H	Score=841;Name=lod=3476	NA	6q23.3	NA	NA	NA	NA	rs1967445	0.48	0.48	NA	NA	NA	NA	NA	NA	NA	0.49	0.49	0.49	0.45	0.4988	0.49	0.54	T	0.99	D	0.723	P	0.039	N	1.000	D	1.15	L	2.48	T	-1.000	T	0.018	T	0.597	1.207	9.902	4.06	0.958	1.632	8.539	1.207187	NA	0.01	NA	NA	NA	0.486	NA	13.3345334
328	6	136597288	136597288	A	C	exonic	BCLAF1	NA	nonsynonymous SNV	BCLAF1:NM_001077440:exon5:c.T1369G:p.Y457D,BCLAF1:NM_014739:exon5:c.T1375G:p.Y459D	exonic	ENSG00000029363	NA	nonsynonymous SNV	ENSG00000029363:ENST00000392348:exon3:c.T1369G:p.Y457D,ENSG00000029363:ENST00000353331:exon5:c.T1369G:p.Y457D,ENSG00000029363:ENST00000527536:exon5:c.T1375G:p.Y459D,ENSG00000029363:ENST00000527613:exon5:c.T1375G:p.Y459D,ENSG00000029363:ENST00000527759:exon5:c.T1369G:p.Y457D,ENSG00000029363:ENST00000529826:exon5:c.T1375G:p.Y459D,ENSG00000029363:ENST00000530429:exon5:c.T1369G:p.Y457D,ENSG00000029363:ENST00000531224:exon5:c.T1375G:p.Y459D,ENSG00000029363:ENST00000532384:exon5:c.T1375G:p.Y459D	Score=841;Name=lod=3476	NA	6q23.3	NA	NA	NA	NA	rs1967446	0.48	0.48	0.293	NA	NA	NA	NA	NA	NA	0.49	0.49	0.49	0.45	0.4989	0.49	0.62	T	0.886	P	0.439	B	0.000	D	1.000	D	0.69	N	2.62	T	-0.952	T	0.013	T	0.837	1.736	11.77	5.21	2.111	4.111	14.019	1.736471	1.736471	0.64	NA	NA	NA	0.486	NA	13.3344334
328	1	144922583	144922583	G	A	exonic	PDE4DIP	NA	nonsynonymous SNV	PDE4DIP:NM_001002811:exon3:c.C1313T:p.S438L,PDE4DIP:NM_001002812:exon7:c.C824T:p.S275L,PDE4DIP:NM_001198834:exon7:c.C824T:p.S275L,PDE4DIP:NM_014644:exon7:c.C824T:p.S275L,PDE4DIP:NM_001198832:exon10:c.C1022T:p.S341L	exonic	ENSG00000178104	NA	nonsynonymous SNV	ENSG00000178104:ENST00000313431:exon3:c.C1313T:p.S438L,ENSG00000178104:ENST00000479408:exon3:c.C185T:p.S62L,ENSG00000178104:ENST00000529945:exon3:c.C1313T:p.S438L,ENSG00000178104:ENST00000369349:exon7:c.C824T:p.S275L,ENSG00000178104:ENST00000369351:exon7:c.C824T:p.S275L,ENSG00000178104:ENST00000369354:exon7:c.C824T:p.S275L,ENSG00000178104:ENST00000369356:exon7:c.C824T:p.S275L,ENSG00000178104:ENST00000313382:exon10:c.C1022T:p.S341L,ENSG00000178104:ENST00000369359:exon10:c.C1235T:p.S412L,ENSG00000178104:ENST00000530740:exon10:c.C1235T:p.S412L	Score=471;Name=lod=109	NA	1q21.1	Score=874;Name=V$BACH2_01	NA	NA	NA	rs1359300	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	0.01	D	0.723	P	0.172	B	.	.	1.000	D	0.69	N	4.82	T	-0.958	T	0.009	T	0.134	2.115	13.03	3.2	0.896	2.152	4.776	2.115089	2.115089	0.07	NA	NA	NA	0.5	NA	13.3333334
328	10	3141542	3141542	G	A	exonic	PFKP	NA	nonsynonymous SNV	PFKP:NM_002627:exon3:c.G262A:p.V88M,PFKP:NM_001242339:exon4:c.G158A:p.S53N	exonic	ENSG00000067057	NA	nonsynonymous SNV	ENSG00000067057:ENST00000381125:exon3:c.G262A:p.V88M,ENSG00000067057:ENST00000407806:exon3:c.G148A:p.V50M,ENSG00000067057:ENST00000421751:exon3:c.G148A:p.V50M,ENSG00000067057:ENST00000381075:exon4:c.G158A:p.S53N	Score=476;Name=lod=115	NA	10p15.2	NA	Name=STAT3,CEBPB	Name=93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.07	T	0.063	B	0.069	B	0.010	N	1.000	D	-0.255	N	-1.35	T	-0.879	T	0.222	T	0.279	3.061	16.22	0.519	0.060	2.311	10.329	3.061138	3.061138	0.42	NA	NA	NA	NA	NA	13.3333334
328	12	57863479	57863479	C	G	exonic	GLI1	NA	nonsynonymous SNV	GLI1:NM_001160045:exon9:c.C1190G:p.T397S,GLI1:NM_001167609:exon10:c.C1451G:p.T484S,GLI1:NM_005269:exon11:c.C1574G:p.T525S	exonic	ENSG00000111087	NA	nonsynonymous SNV	ENSG00000111087:ENST00000528467:exon9:c.C1451G:p.T484S,ENSG00000111087:ENST00000543426:exon9:c.C1190G:p.T397S,ENSG00000111087:ENST00000546141:exon10:c.C1451G:p.T484S,ENSG00000111087:ENST00000228682:exon11:c.C1574G:p.T525S	Score=461;Name=lod=100	NA	12q13.3	Score=688;Name=V$BRACH_01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1	T	0.005	B	0.031	B	0.039	N	0.995	N	-0.235	N	2.79	T	-0.942	T	0.013	T	0.278	1.048	9.281	3.73	1.296	1.427	6.867	1.048264	NA	0.23	NA	NA	NA	NA	NA	13.3333334
328	13	75900394	75900394	C	T	exonic	TBC1D4	NA	nonsynonymous SNV	TBC1D4:NM_014832:exon10:c.G1972A:p.D658N	exonic	ENSG00000136111	NA	nonsynonymous SNV	ENSG00000136111:ENST00000413735:exon5:c.G508A:p.D170N,ENSG00000136111:ENST00000377625:exon10:c.G1972A:p.D658N,ENSG00000136111:ENST00000377636:exon10:c.G1972A:p.D658N,ENSG00000136111:ENST00000431480:exon10:c.G1972A:p.D658N	Score=300;Name=lod=22	NA	13q22.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.55	T	0.015	B	0.009	B	0.089	N	1.000	D	1.175	L	0.91	T	-1.077	T	0.079	T	0.033	2.431	14.09	4.64	1.446	2.833	11.345	2.431135	2.431135	0.4	NA	NA	NA	NA	NA	13.3333334
328	17	77078115	77078115	C	A	exonic	ENGASE	NA	nonsynonymous SNV	ENGASE:NM_001042573:exon7:c.C1008A:p.N336K	exonic	ENSG00000167280	NA	nonsynonymous SNV	ENSG00000167280:ENST00000539857:exon6:c.C450A:p.N150K,ENSG00000167280:ENST00000579016:exon7:c.C1008A:p.N336K	NA	NA	17q25.3	Score=851;Name=V$ARNT_01	Name=Egr-1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	.	.	0.068	B	0.038	B	0.046	N	0.999	N	1.155	L	.	.	-1.057	T	0.046	T	0.187	-0.085	3.584	-7.57	-1.356	-3.209	1.142	-0.085074	NA	0.23	NA	NA	NA	NA	NA	13.3333334
328	6	32036743	32036743	C	T	exonic	TNXB	NA	nonsynonymous SNV	TNXB:NM_019105:exon16:c.G5758A:p.G1920R	exonic	ENSG00000168477	NA	nonsynonymous SNV	ENSG00000168477:ENST00000375244:exon16:c.G5758A:p.G1920R,ENSG00000168477:ENST00000375247:exon16:c.G5758A:p.G1920R	NA	NA	6p21.33	Score=793;Name=V$CDPCR3_01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000008655	NA	0.14	T	0.926	P	0.638	P	0.007	N	0.999	N	1.65	L	3.64	T	-0.979	T	0.010	T	0.261	2.557	14.51	4.07	1.226	1.769	8.106	2.557304	2.557304	0	NA	NA	NA	NA	NA	13.3333247
328	12	129293353	129293353	A	G	exonic	SLC15A4	NA	nonsynonymous SNV	SLC15A4:NM_145648:exon5:c.T1238C:p.M413T	exonic	ENSG00000139370	NA	nonsynonymous SNV	ENSG00000139370:ENST00000544112:exon2:c.T227C:p.M76T,ENSG00000139370:ENST00000266771:exon5:c.T1238C:p.M413T,ENSG00000139370:ENST00000376740:exon5:c.T338C:p.M113T	Score=498;Name=lod=141	NA	12q24.32	Score=796;Name=V$PAX2_01	NA	NA	NA	rs189625027	0.0005	0.0005	NA	0.000199681	NA	NA	0.0014	NA	NA	NA	NA	0.0028	NA	0.0000165	0.0028	0.31	T	0.001	B	0.004	B	0.000	N	1.000	D	1.35	L	3.85	T	-1.020	T	0.124	T	0.629	2.907	15.69	4.32	0.983	6.555	11.840	2.906903	2.906903	0.27	NA	NA	NA	NA	NA	13.3333169
328	17	6483131	6483131	T	C	exonic	KIAA0753	NA	nonsynonymous SNV	KIAA0753:NM_014804:exon19:c.A2840G:p.Q947R	exonic	ENSG00000198920	NA	nonsynonymous SNV	ENSG00000198920:ENST00000589033:exon12:c.A1208G:p.Q403R,ENSG00000198920:ENST00000542606:exon17:c.A1943G:p.Q648R,ENSG00000198920:ENST00000572370:exon18:c.A1943G:p.Q648R,ENSG00000198920:ENST00000361413:exon19:c.A2840G:p.Q947R	Score=313;Name=lod=25	NA	17p13.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00001657	NA	0.31	T	0.008	B	0.009	B	0.001	N	0.592	D	1.5	L	0.97	T	-0.983	T	0.082	T	0.271	3.359	17.32	3.22	1.008	2.671	7.931	3.35874	3.35874	0.15	NA	NA	NA	NA	NA	13.3333168
328	20	51870120	51870120	A	T	exonic	TSHZ2	NA	nonsynonymous SNV	TSHZ2:NM_001193421:exon2:c.A114T:p.Q38H,TSHZ2:NM_173485:exon2:c.A123T:p.Q41H	exonic	ENSG00000182463	NA	nonsynonymous SNV	ENSG00000182463:ENST00000329613:exon2:c.A114T:p.Q38H,ENSG00000182463:ENST00000371497:exon2:c.A123T:p.Q41H,ENSG00000182463:ENST00000603338:exon2:c.A114T:p.Q38H	NA	NA	20q13.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00001662	NA	0.04	D	0.001	B	0.001	B	0.000	D	0.998	N	1.61	L	2.49	T	-1.088	T	0.026	T	0.202	0.315	5.706	-6.08	-1.856	-1.194	11.778	0.314831	NA	0.02	NA	NA	NA	NA	NA	13.3333168
328	17	10547753	10547753	G	A	exonic	MYH3	NA	nonsynonymous SNV	MYH3:NM_002470:exon14:c.C1325T:p.T442I	exonic	ENSG00000109063	NA	nonsynonymous SNV	ENSG00000109063:ENST00000226209:exon13:c.C1325T:p.T442I,ENSG00000109063:ENST00000583535:exon14:c.C1325T:p.T442I	Score=521;Name=lod=174	NA	17p13.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00003295	NA	0.27	T	0.003	B	0.008	B	.	.	0.646	N	0.91	L	-2.28	D	-0.326	T	0.453	T	0.18	1.496	10.95	4.5	2.496	3.328	11.758	1.495821	1.495821	NA	NA	NA	NA	NA	NA	13.3333004
328	X	2833643	2833643	C	A	exonic	ARSD	NA	nonsynonymous SNV	ARSD:NM_001669:exon6:c.G954T:p.Q318H	exonic	ENSG00000006756	NA	nonsynonymous SNV	ENSG00000006756:ENST00000381154:exon6:c.G954T:p.Q318H	NA	NA	Xp22.33	NA	NA	Name=4	NA	rs115332247	NA	NA	0.06598	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0001	NA	0.06	T	0.005	B	0.02	B	0.914	N	1.000	P	1.39	L	-3.26	D	-0.434	T	0.591	D	0.062	0.787	8.15	-6.79	-1.408	-2.691	2.444	0.787191	NA	0.06	NA	NA	ID=COSM1467377;OCCURENCE=1(large_intestine)	NA	NA	13.3332334
328	6	17794837	17794837	T	C	exonic	KIF13A	NA	nonsynonymous SNV	KIF13A:NM_001105566:exon24:c.A3041G:p.D1014G,KIF13A:NM_001105567:exon24:c.A3041G:p.D1014G,KIF13A:NM_001105568:exon24:c.A3041G:p.D1014G,KIF13A:NM_022113:exon24:c.A3041G:p.D1014G	exonic	ENSG00000137177	NA	nonsynonymous SNV	ENSG00000137177:ENST00000502297:exon1:c.A92G:p.D31G,ENSG00000137177:ENST00000506044:exon2:c.A221G:p.D74G,ENSG00000137177:ENST00000259711:exon24:c.A3041G:p.D1014G,ENSG00000137177:ENST00000378814:exon24:c.A3041G:p.D1014G,ENSG00000137177:ENST00000378816:exon24:c.A3041G:p.D1014G,ENSG00000137177:ENST00000378826:exon24:c.A3041G:p.D1014G,ENSG00000137177:ENST00000378843:exon24:c.A3041G:p.D1014G	Score=456;Name=lod=95	NA	6p22.3	NA	NA	NA	NA	rs201793412	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0001	0.0002	0.13	T	0.14	B	0.247	B	0.000	D	1.000	D	1.895	L	1.21	T	-0.649	T	0.257	T	0.94	3.336	17.23	5.55	2.233	5.030	15.984	3.336158	3.336158	0.07	0.000242	0	NA	NA	NA	13.3329914
328	12	2907914	2907914	G	A	exonic	FKBP4	NA	nonsynonymous SNV	FKBP4:NM_002014:exon4:c.G436A:p.E146K	exonic	ENSG00000004478	NA	nonsynonymous SNV	ENSG00000004478:ENST00000001008:exon4:c.G436A:p.E146K	Score=389;Name=lod=51	NA	12p13.33	NA	NA	NA	NA	rs191293085	0.0009	0.0009	NA	0.000599042	0.002	NA	0.0014	NA	NA	0.0013	NA	0.0028	NA	0.0000906	0.0028	0.32	T	0.307	B	0.065	B	0.000	D	1.000	D	0.68	N	0.56	T	-1.024	T	0.105	T	0.666	3.726	18.92	4.87	2.242	9.383	16.577	3.725768	3.725768	0.54	NA	NA	NA	NA	NA	13.3312428
328	14	64604650	64604650	A	G	exonic	SYNE2	NA	nonsynonymous SNV	SYNE2:NM_015180:exon79:c.A14792G:p.K4931R,SYNE2:NM_182914:exon79:c.A14792G:p.K4931R	exonic	ENSG00000054654	NA	nonsynonymous SNV	ENSG00000054654:ENST00000394768:exon27:c.A3947G:p.K1316R,ENSG00000054654:ENST00000555002:exon30:c.A4694G:p.K1565R,ENSG00000054654:ENST00000554584:exon77:c.A14543G:p.K4848R,ENSG00000054654:ENST00000344113:exon79:c.A14792G:p.K4931R,ENSG00000054654:ENST00000358025:exon79:c.A14792G:p.K4931R,ENSG00000054654:ENST00000357395:exon80:c.A3947G:p.K1316R	Score=444;Name=lod=85	NA	14q23.2	NA	Name=CTCF,Rad21,SMC3_(ab9263),CTCF_(C-20),CTCF_(SC-5916)	Name=50	NA	rs147640636	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0007	0.0014	0.41	T	0.282	B	0.159	B	0.006	N	1.000	D	1.295	L	1.36	T	-1.101	T	0.068	T	0.143	2.214	13.36	2.12	0.117	2.659	9.838	2.214493	2.214493	0.12	0.001395	0.000227	NA	NA	NA	13.3312384
328	7	29966229	29966229	T	C	exonic	SCRN1	NA	nonsynonymous SNV	SCRN1:NM_001145515:exon6:c.A721G:p.I241V,SCRN1:NM_001145513:exon7:c.A925G:p.I309V,SCRN1:NM_001145514:exon7:c.A985G:p.I329V,SCRN1:NM_014766:exon7:c.A925G:p.I309V	exonic	ENSG00000136193	NA	nonsynonymous SNV	ENSG00000136193:ENST00000416113:exon4:c.A403G:p.I135V,ENSG00000136193:ENST00000409497:exon6:c.A925G:p.I309V,ENSG00000136193:ENST00000425819:exon6:c.A721G:p.I241V,ENSG00000136193:ENST00000242059:exon7:c.A925G:p.I309V,ENSG00000136193:ENST00000426154:exon7:c.A925G:p.I309V,ENSG00000136193:ENST00000434476:exon7:c.A985G:p.I329V	Score=545;Name=lod=218	NA	7p14.3	NA	NA	NA	NA	rs151249549	0.0009	0.0009	NA	0.000399361	0.001	NA	NA	0.0008	NA	0.0013	NA	NA	0.002	0.0012	0.002	.	.	0.103	B	0.031	B	0.000	D	1.000	D	1.63	L	3.18	T	-1.086	T	0.036	T	0.142	1.872	12.22	5.68	2.185	3.404	14.796	1.872421	1.872421	0.08	0.001395	0.000908	NA	NA	NA	13.3297384
328	15	52643564	52643564	G	A	exonic	MYO5A	NA	nonsynonymous SNV	MYO5A:NM_000259:exon28:c.C3736T:p.R1246C,MYO5A:NM_001142495:exon28:c.C3736T:p.R1246C	exonic	ENSG00000197535	NA	nonsynonymous SNV	ENSG00000197535:ENST00000399228:exon1:c.C115T:p.R39C,ENSG00000197535:ENST00000399229:exon1:c.C16T:p.R6C,ENSG00000197535:ENST00000568914:exon1:c.C115T:p.R39C,ENSG00000197535:ENST00000356338:exon28:c.C3736T:p.R1246C,ENSG00000197535:ENST00000358212:exon28:c.C3736T:p.R1246C,ENSG00000197535:ENST00000399231:exon28:c.C3736T:p.R1246C,ENSG00000197535:ENST00000399233:exon28:c.C3736T:p.R1246C,ENSG00000197535:ENST00000553916:exon28:c.C3736T:p.R1246C	Score=378;Name=lod=46	NA	15q21.2	NA	Name=CEBPB	NA	NA	rs1058219	0.17	0.17	0.149	0.148562	0.1819	0.1716	0.1499	0.0991	0.1564	0.18	0.2	0.19	0.1	0.1543	0.21	0.01	D	0.997	D	0.648	P	0.006	N	0.000	P	0	N	3.53	T	-1.013	T	0.000	T	0.29	3.709	18.84	2.26	0.734	2.503	8.587	3.70896	3.70896	0	0.167543	0.102475	NA	0.174	NA	13.3295904
328	18	215504	215504	G	A	exonic	THOC1	NA	nonsynonymous SNV	THOC1:NM_005131:exon20:c.C1603T:p.P535S	exonic	ENSG00000079134	NA	nonsynonymous SNV	ENSG00000079134:ENST00000261600:exon20:c.C1603T:p.P535S	Score=645;Name=lod=556	NA	18p11.32	NA	NA	NA	NA	rs138671246	0.0009	0.0009	0.001	0.000399361	0.001	NA	0.0014	NA	NA	0.0013	NA	0.0028	NA	0.0014	0.0028	0.59	T	0.029	B	0.022	B	0.000	D	1.000	D	0.665	N	.	.	-0.940	T	0.157	T	0.489	1.903	12.32	5.44	2.560	6.757	19.261	1.902522	1.902522	NA	0.001954	0.00027	NA	NA	NA	13.3289794
328	5	110096992	110096992	A	G	exonic	SLC25A46	NA	nonsynonymous SNV	SLC25A46:NM_138773:exon8:c.A767G:p.K256R	exonic	ENSG00000164209	NA	nonsynonymous SNV	ENSG00000164209:ENST00000509432:exon4:c.A128G:p.K43R,ENSG00000164209:ENST00000504098:exon7:c.A329G:p.K110R,ENSG00000164209:ENST00000355943:exon8:c.A767G:p.K256R,ENSG00000164209:ENST00000509442:exon8:c.A494G:p.K165R,ENSG00000164209:ENST00000513807:exon8:c.A281G:p.K94R	Score=502;Name=lod=146	NA	5q22.1	NA	NA	NA	NA	rs141213807	0.0005	0.0005	NA	0.000399361	0.001	NA	NA	0.0008	NA	0.0013	NA	NA	NA	0.002	0.003	0.38	T	0.008	B	0.009	B	0.000	D	1.000	D	1.32	L	-1.15	T	-0.343	T	0.471	T	0.191	1.528	11.06	5.96	2.284	5.902	16.445	1.528277	1.528277	0.67	0.003024	0.001135	NA	NA	NA	13.3273094
329	16	1308156	1308156	G	A	exonic	TPSD1	NA	nonsynonymous SNV	TPSD1:NM_012217:exon4:c.G617A:p.G206D	exonic	ENSG00000095917	NA	nonsynonymous SNV	ENSG00000095917:ENST00000211076:exon4:c.G617A:p.G206D,ENSG00000095917:ENST00000397534:exon5:c.G596A:p.G199D	NA	NA	16p13.3	NA	NA	NA	NA	rs139855296	0.0014	0.0014	0.003	0.000998403	0.005	NA	NA	NA	NA	0.004	NA	NA	NA	0.0014	0.004	0.55	T	0.607	P	0.505	P	0.000	D	1.000	N	1.41	L	-2.42	D	-0.420	T	0.562	D	0.558	1.422	10.69	2.09	1.537	-0.018	8.856	1.422312	1.422312	0.35	0.002094	0.000456	NA	NA	NA	13.3248394
329	14	92253952	92253952	T	G	exonic	TC2N	NA	nonsynonymous SNV	TC2N:NM_001128595:exon10:c.A1067C:p.E356A,TC2N:NM_001128596:exon10:c.A1067C:p.E356A,TC2N:NM_152332:exon10:c.A1067C:p.E356A	exonic	ENSG00000165929	NA	nonsynonymous SNV	ENSG00000165929:ENST00000556590:exon4:c.A323C:p.E108A,ENSG00000165929:ENST00000556018:exon9:c.A875C:p.E292A,ENSG00000165929:ENST00000340892:exon10:c.A1067C:p.E356A,ENSG00000165929:ENST00000360594:exon10:c.A1067C:p.E356A,ENSG00000165929:ENST00000435962:exon10:c.A1067C:p.E356A	Score=474;Name=lod=113	NA	14q32.12	NA	NA	NA	NA	rs144110131	0.0009	0.0009	0.001	0.000599042	0.002	NA	NA	0.0008	NA	0.0026	NA	NA	NA	0.0023	0.0055	0.21	T	0.874	P	0.641	P	0.000	D	0.923	N	0.345	N	3.42	T	-1.099	T	0.026	T	0.475	2.582	14.59	5.73	2.308	6.602	16.312	2.581856	2.581856	0.2	0.005465	0	NA	NA	NA	13.3235684
329	11	116728630	116728630	G	C	exonic	SIK3	NA	nonsynonymous SNV	SIK3:NM_025164:exon20:c.C3233G:p.P1078R	exonic	ENSG00000160584	NA	nonsynonymous SNV	ENSG00000160584:ENST00000375288:exon19:c.C1238G:p.P413R,ENSG00000160584:ENST00000292055:exon20:c.C3233G:p.P1078R,ENSG00000160584:ENST00000375300:exon20:c.C3407G:p.P1136R,ENSG00000160584:ENST00000446921:exon20:c.C3227G:p.P1076R,ENSG00000160584:ENST00000542607:exon20:c.C3053G:p.P1018R,ENSG00000160584:ENST00000434315:exon21:c.C2750G:p.P917R	Score=532;Name=lod=193	NA	11q23.3	NA	NA	NA	NA	rs12225230	0.15	0.15	0.136	0.170727	0.1511	0.0972	0.1902	0.1513	0.2791	0.14	0.11	0.19	0.18	0.187	0.19	0	D	0.967	D	0.663	P	0.001	U	0.001	P	0.805	L	1.37	T	-1.055	T	0.001	T	0.425	1.653	11.49	5.54	2.585	5.065	13.745	1.65334	1.65334	0	0.173184	0.136983	NA	0.065	NA	13.3220494
329	16	10775932	10775932	A	G	exonic	TEKT5	NA	nonsynonymous SNV	TEKT5:NM_144674:exon4:c.T781C:p.C261R	exonic	ENSG00000153060	NA	nonsynonymous SNV	ENSG00000153060:ENST00000576638:exon3:c.T100C:p.C34R,ENSG00000153060:ENST00000283025:exon4:c.T781C:p.C261R	Score=300;Name=lod=22	NA	16p13.13	NA	Name=HNF4A_(H-171),HNF4G_(SC-6558)	NA	NA	rs138988373	0.0018	0.0018	0.002	0.00219649	0.006	NA	0.0058	NA	0.001	0.004	NA	0.0028	NA	0.0025	0.004	0.53	T	0.0	B	0.0	B	0.038	N	0.931	D	-1.28	N	4.43	T	-0.868	T	0.003	T	0.387	-0.58	1.395	3.88	1.889	1.120	5.513	-0.579606	NA	0.41	0.003372	0.000683	NA	NA	NA	13.3214614
329	16	10788200	10788200	C	G	exonic	TEKT5	NA	nonsynonymous SNV	TEKT5:NM_144674:exon1:c.G531C:p.E177D	exonic	ENSG00000153060	NA	nonsynonymous SNV	ENSG00000153060:ENST00000283025:exon1:c.G531C:p.E177D	Score=429;Name=lod=74	NA	16p13.13	NA	NA	NA	NA	rs148185751	0.0023	0.0023	0	0.00259585	0.006	NA	0.0058	0.0015	0.001	0.004	NA	0.0028	0.002	0.0027	0.004	0.02	D	0.319	B	0.364	B	0.003	N	0.997	D	2.81	M	3.97	T	-1.173	T	0.028	T	0.49	1.905	12.33	4.68	1.368	0.283	8.029	1.905042	1.905042	0.01	0.003372	0.001138	NA	NA	NA	13.3212614
329	8	39695677	39695677	C	A	exonic	ADAM2	NA	nonsynonymous SNV	ADAM2:NM_001464:exon1:c.G28T:p.G10W	exonic	ENSG00000104755	NA	nonsynonymous SNV	ENSG00000104755:ENST00000265708:exon1:c.G28T:p.G10W,ENSG00000104755:ENST00000347580:exon1:c.G28T:p.G10W,ENSG00000104755:ENST00000379853:exon1:c.G28T:p.G10W,ENSG00000104755:ENST00000521880:exon1:c.G28T:p.G10W	NA	NA	8p11.22	NA	NA	NA	NA	rs34800519	0.02	0.02	0.032	0.0263578	0.003	NA	0.0101	0.0923	NA	0.004	NA	0.01	0.1	0.0075	0.1	.	.	1.0	D	0.999	D	.	.	1.000	N	2.52	M	5.24	T	-1.098	T	0.001	T	0.43	2.752	15.16	3.26	2.114	1.104	10.285	2.751827	2.751827	0	0.00186	0.067862	NA	0.007	NA	13.3209734
329	16	2296927	2296927	G	A	exonic	ECI1	NA	nonsynonymous SNV	ECI1:NM_001178029:exon3:c.C227T:p.T76M,ECI1:NM_001919:exon3:c.C227T:p.T76M	exonic	ENSG00000167969	NA	nonsynonymous SNV	ENSG00000167969:ENST00000566379:exon2:c.C50T:p.T17M,ENSG00000167969:ENST00000301729:exon3:c.C227T:p.T76M,ENSG00000167969:ENST00000562238:exon3:c.C227T:p.T76M,ENSG00000167969:ENST00000570258:exon3:c.C50T:p.T17M	Score=304;Name=lod=23	NA	16p13.3	NA	NA	NA	NA	rs112729404	0.0005	0.0005	NA	0.00658946	0.002	0.001	NA	NA	0.0307	0.0013	NA	NA	NA	0.0083	0.0042	0.1	T	0.962	D	0.344	B	0.000	N	1.000	D	2.01	M	-0.37	T	-0.712	T	0.228	T	0.795	1.171	9.763	3.22	0.761	6.033	9.082	1.17056	NA	0.01	0.004186	0.000227	NA	NA	NA	13.3188474
329	2	136620315	136620315	T	C	exonic	MCM6	NA	nonsynonymous SNV	MCM6:NM_005915:exon8:c.A1082G:p.N361S	exonic	ENSG00000076003	NA	nonsynonymous SNV	ENSG00000076003:ENST00000264156:exon8:c.A1082G:p.N361S	Score=698;Name=lod=919	NA	2q21.3	NA	NA	NA	NA	rs141448886	0.0027	0.0027	0.001	0.00239617	0.008	0.001	0.0014	NA	0.002	0.01	0.0017	NA	NA	0.004	0.01	0.24	T	0.399	B	0.34	B	0.000	D	1.000	D	1.32	L	2.8	T	-1.082	T	0.026	T	0.235	4.198	21.8	5.27	1.973	7.589	15.208	4.19751	4.19751	0.05	0.004535	0.000908	NA	NA	NA	13.3167984
330	11	65314277	65314277	G	C	exonic	LTBP3	NA	nonsynonymous SNV	LTBP3:NM_001130144:exon15:c.C2222G:p.A741G,LTBP3:NM_001164266:exon15:c.C1871G:p.A624G,LTBP3:NM_021070:exon15:c.C2222G:p.A741G	exonic	ENSG00000168056	NA	nonsynonymous SNV	ENSG00000168056:ENST00000527339:exon2:c.C242G:p.A81G,ENSG00000168056:ENST00000532932:exon4:c.C512G:p.A171G,ENSG00000168056:ENST00000536982:exon10:c.C1100G:p.A367G,ENSG00000168056:ENST00000301873:exon15:c.C2222G:p.A741G,ENSG00000168056:ENST00000322147:exon15:c.C2222G:p.A741G,ENSG00000168056:ENST00000530866:exon16:c.C1955G:p.A652G	Score=439;Name=lod=81	NA	11q13.1	Score=987;Name=V$SP1_Q6	Name=USF-1,IRF1,Pbx3,E2F6_(H-50),TAF1,SP1	Name=71	NA	rs148780991	0.01	0.01	NA	0.00878594	0.0109	0.002	0.0101	0.0182	NA	0.01	NA	0.01	0.01	0.0074	0.015	0.36	T	0.234	B	0.11	B	0.001	N	1.000	N	-0.39	N	1.95	T	-1.000	T	0.011	T	0.172	1.888	12.27	4.08	1.109	0.698	9.287	1.887566	1.887566	0.21	0.007009	0.015539	NA	NA	NA	13.3080244
331	15	41819716	41819716	C	T	exonic	RPAP1	NA	nonsynonymous SNV	RPAP1:NM_015540:exon12:c.G1516A:p.E506K	exonic	ENSG00000103932	NA	nonsynonymous SNV	ENSG00000103932:ENST00000304330:exon12:c.G1516A:p.E506K,ENSG00000103932:ENST00000561603:exon12:c.G1516A:p.E506K,ENSG00000103932:ENST00000562303:exon12:c.G1516A:p.E506K	Score=432;Name=lod=76	NA	15q15.1	NA	NA	NA	NA	rs1200345	0.51	0.51	0.514	0.509984	0.5179	0.3512	0.5692	0.6437	0.4427	0.53	0.34	0.56	0.65	0.5073	0.65	0.06	T	0.995	D	0.454	P	0.000	D	0.000	P	2.62	M	-0.2	T	-0.875	T	0.000	T	0.322	4.643	25.5	5.37	2.692	5.647	18.251	4.642865	4.642865	0.01	0.503721	0.63232	ID=COSM147884;OCCURENCE=1(stomach)	0.493	NA	13.3044124
331	2	179393691	179393691	G	A	exonic	TTN	NA	nonsynonymous SNV	TTN:NM_003319:exon188:c.C79592T:p.T26531I,TTN:NM_133432:exon189:c.C79967T:p.T26656I,TTN:NM_133437:exon189:c.C80168T:p.T26723I,TTN:NM_133378:exon309:c.C99083T:p.T33028I,TTN:NM_001256850:exon310:c.C101864T:p.T33955I,TTN:NM_001267550:exon360:c.C106787T:p.T35596I	exonic	ENSG00000155657	NA	nonsynonymous SNV	ENSG00000155657:ENST00000460472:exon188:c.C79592T:p.T26531I,ENSG00000155657:ENST00000342175:exon189:c.C80168T:p.T26723I,ENSG00000155657:ENST00000359218:exon189:c.C79967T:p.T26656I,ENSG00000155657:ENST00000342992:exon309:c.C99083T:p.T33028I,ENSG00000155657:ENST00000591111:exon310:c.C101864T:p.T33955I,ENSG00000155657:ENST00000589042:exon360:c.C106787T:p.T35596I	Score=510;Name=lod=157	NA	2q31.2	NA	NA	NA	NA	rs55842557	0.01	0.01	0.004	0.00379393	0.0159	NA	0.0043	NA	NA	0.02	NA	0.01	NA	0.0098	0.02	0	D	0.257	B	0.068	B	.	.	1.000	N	0.695	N	0.25	T	-0.944	T	0.084	T	0.158	2.625	14.74	4.74	2.677	3.452	13.248	2.624609	2.624609	NA	0.006818	0.000793	NA	NA	CLINSIG=probable-non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000040981.1|RCV000126004.1;CLNDSDB=.|.;CLNDSDBID=.|.	13.3008154
331	10	72517830	72517830	G	A	exonic	ADAMTS14	NA	nonsynonymous SNV	ADAMTS14:NM_080722:exon20:c.G3050A:p.S1017N,ADAMTS14:NM_139155:exon20:c.G3059A:p.S1020N	exonic	ENSG00000138316	NA	nonsynonymous SNV	ENSG00000138316:ENST00000373207:exon20:c.G3050A:p.S1017N,ENSG00000138316:ENST00000373208:exon20:c.G3059A:p.S1020N	Score=410;Name=lod=62	NA	10q22.1	Score=782;Name=V$MYOGNF1_01	Name=CCNT2	NA	NA	rs10999516	0.23	0.23	0.213	0.213458	0.1849	0.37	0.2262	0.1543	0.1524	0.19	0.37	0.19	0.15	0.1882	0.37	0.7	T	0.464	P	0.288	B	0.057	N	0.952	P	-0.785	N	0.65	T	-0.978	T	0.000	T	0.014	1.703	11.65	3.39	2.250	2.373	5.864	1.702981	1.702981	0.32	0.16093	0.174535	NA	0.261	NA	13.2993034
331	8	128428823	128428823	G	C	exonic	POU5F1B	NA	nonsynonymous SNV	POU5F1B:NM_001159542:exon1:c.G712C:p.E238Q	exonic	ENSG00000212993	NA	nonsynonymous SNV	ENSG00000212993:ENST00000391675:exon1:c.G712C:p.E238Q,ENSG00000212993:ENST00000465342:exon2:c.G712C:p.E238Q	Score=251;Name=lod=14	NA	8q24.21	NA	NA	NA	NA	rs7002225	0.5	0.5	0.448	0.484026	0.5239	0.5982	0.6023	0.2428	0.5675	0.52	0.62	0.57	0.25	0.5106	0.62	0.06	T	1.0	D	1.0	D	0.000	D	0.000	P	2.89	M	-3.95	D	-1.005	T	0.000	T	0.29	2.881	15.6	0.201	0.077	6.555	5.455	2.880629	2.880629	0	NA	NA	NA	0.507	NA	13.2988334
331	2	71740897	71740897	C	A	exonic	DYSF	NA	nonsynonymous SNV	DYSF:NM_001130455:exon6:c.C512A:p.A171E,DYSF:NM_001130976:exon6:c.C509A:p.A170E,DYSF:NM_001130977:exon6:c.C509A:p.A170E,DYSF:NM_001130978:exon6:c.C509A:p.A170E,DYSF:NM_001130983:exon6:c.C512A:p.A171E,DYSF:NM_001130984:exon6:c.C512A:p.A171E,DYSF:NM_001130986:exon6:c.C512A:p.A171E,DYSF:NM_003494:exon6:c.C509A:p.A170E,DYSF:NM_001130979:exon7:c.C602A:p.A201E,DYSF:NM_001130980:exon7:c.C602A:p.A201E,DYSF:NM_001130981:exon7:c.C602A:p.A201E,DYSF:NM_001130982:exon7:c.C605A:p.A202E,DYSF:NM_001130985:exon7:c.C605A:p.A202E,DYSF:NM_001130987:exon7:c.C605A:p.A202E	exonic	ENSG00000135636	NA	nonsynonymous SNV	ENSG00000135636:ENST00000258104:exon6:c.C509A:p.A170E,ENSG00000135636:ENST00000394120:exon6:c.C512A:p.A171E,ENSG00000135636:ENST00000409366:exon6:c.C512A:p.A171E,ENSG00000135636:ENST00000409744:exon6:c.C512A:p.A171E,ENSG00000135636:ENST00000429174:exon6:c.C509A:p.A170E,ENSG00000135636:ENST00000409582:exon7:c.C602A:p.A201E,ENSG00000135636:ENST00000409651:exon7:c.C605A:p.A202E,ENSG00000135636:ENST00000409762:exon7:c.C602A:p.A201E,ENSG00000135636:ENST00000410020:exon7:c.C605A:p.A202E,ENSG00000135636:ENST00000410041:exon7:c.C605A:p.A202E,ENSG00000135636:ENST00000413539:exon7:c.C602A:p.A201E	Score=452;Name=lod=92	NA	2p13.2	NA	Name=ZNF263	NA	NA	rs34999029	0.01	0.01	0.006	0.00419329	0.0109	NA	0.0101	0.0008	0.002	0.01	NA	0.01	NA	0.0098	0.022	0.99	T	0.187	B	0.278	B	0.032	N	0.969	N	0.55	N	-1.61	D	-0.847	T	0.208	T	0.323	0.611	7.291	3.5	1.142	0.098	12.783	0.611124	NA	0.76	0.015349	0.000681	NA	0.014	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000080300.3;CLNDSDB=.;CLNDSDBID=.	13.2972844
332	16	82182418	82182418	T	C	exonic	MPHOSPH6	NA	nonsynonymous SNV	MPHOSPH6:NM_005792:exon5:c.A401G:p.D134G	exonic	ENSG00000135698	NA	nonsynonymous SNV	ENSG00000135698:ENST00000258169:exon5:c.A401G:p.D134G,ENSG00000135698:ENST00000563504:exon5:c.A314G:p.D105G,ENSG00000135698:ENST00000563100:exon6:c.A347G:p.D116G	Score=538;Name=lod=204	NA	16q23.3	NA	NA	NA	NA	rs34375324	0.01	0.01	0.007	0.00419329	0.0159	0.001	0.0029	NA	0.002	0.02	0.0017	0.0028	NA	0.0089	0.02	0.07	T	0.346	B	0.077	B	0.000	D	1.000	D	1.39	L	0.87	T	-1.072	T	0.052	T	0.306	3.408	17.51	5.84	2.232	5.874	15.376	3.408034	3.408034	0.09	0.015465	0.003862	NA	0.007	NA	13.2930684
332	16	55703498	55703498	C	T	exonic	SLC6A2	NA	nonsynonymous SNV	SLC6A2:NM_001043:exon2:c.C296T:p.T99I,SLC6A2:NM_001172504:exon2:c.C296T:p.T99I,SLC6A2:NM_001172501:exon3:c.C296T:p.T99I	exonic	ENSG00000103546	NA	nonsynonymous SNV	ENSG00000103546:ENST00000219833:exon2:c.C296T:p.T99I,ENSG00000103546:ENST00000379906:exon2:c.C296T:p.T99I,ENSG00000103546:ENST00000561820:exon2:c.C296T:p.T99I,ENSG00000103546:ENST00000566163:exon2:c.C296T:p.T99I,ENSG00000103546:ENST00000414754:exon3:c.C296T:p.T99I,ENSG00000103546:ENST00000568529:exon3:c.C296T:p.T99I,ENSG00000103546:ENST00000568655:exon3:c.C296T:p.T99I,ENSG00000103546:ENST00000568943:exon3:c.C296T:p.T99I	Score=461;Name=lod=100	NA	16q12.2	Score=711;Name=V$HOX13_01	NA	NA	NA	rs1805065	0.0032	0.0032	0.002	0.00559105	0.0129	NA	0.0144	0.0015	0.0031	0.01	NA	0.01	NA	0.0094	0.018	0.82	T	0.001	B	0.008	B	0.000	D	1.000	D	-0.205	N	-0.71	T	-0.942	T	0.064	T	0.398	1.401	10.62	4.9	2.778	0.923	8.967	1.400808	1.400808	0.51	0.018372	0.004777	NA	NA	NA	13.2926614
332	6	29323905	29323905	A	C	exonic	OR5V1	NA	nonsynonymous SNV	OR5V1:NM_030876:exon1:c.T68G:p.L23W	exonic	ENSG00000243729	NA	nonsynonymous SNV	ENSG00000243729:ENST00000543825:exon1:c.T68G:p.L23W,ENSG00000243729:ENST00000377154:exon4:c.T68G:p.L23W	NA	NA	6p22.1	NA	NA	NA	NA	rs6930033	0.24	0.24	0.214	0.251198	0.17	0.4038	0.2478	0.1672	0.2935	0.15	0.4	0.26	0.15	0.2113	0.4	0.05	D	0.997	D	0.817	P	0.205	N	1.000	P	2.325	M	3.42	T	-1.124	T	0.029	T	0.176	2.869	15.56	4.37	1.953	1.174	13.664	2.86885	2.86885	0.12	0.160298	0.148089	NA	0.261	NA	13.2917354
332	17	46607958	46607958	T	A	exonic	HOXB1	NA	nonsynonymous SNV	HOXB1:NM_002144:exon1:c.A309T:p.Q103H	exonic	ENSG00000120094	NA	nonsynonymous SNV	ENSG00000120094:ENST00000239174:exon1:c.A309T:p.Q103H,ENSG00000120094:ENST00000577092:exon1:c.A309T:p.Q103H	NA	NA	17q21.32	NA	NA	NA	NA	rs12939811	0.11	0.11	0.104	0.114417	0.1928	0.0982	0.1023	0.0651	0.1258	0.2	0.07	0.09	0.05	0.1622	0.2	0.03	D	0.641	P	0.19	B	0.001	D	1.000	P	1.625	L	-2.58	D	-0.903	T	0.001	T	0.091	0.848	8.428	-5.68	-1.633	-1.050	11.797	0.847945	NA	0.18	0.188488	0.077848	NA	0.174	NA	13.2898454
332	11	124440362	124440362	C	G	exonic	OR8A1	NA	nonsynonymous SNV	OR8A1:NM_001005194:exon1:c.C398G:p.T133R	exonic	ENSG00000196119	NA	nonsynonymous SNV	ENSG00000196119:ENST00000284287:exon1:c.C398G:p.T133R	Score=366;Name=lod=41	NA	11q24.2	NA	NA	NA	NA	rs55861866	0.28	0.28	0.261	0.272165	0.3598	0.2659	0.3847	0.0726	0.3783	0.35	0.28	0.38	0.09	0.3368	0.38	0	D	0.956	P	0.836	P	0.000	D	0.046	P	3.635	H	4.98	T	-0.988	T	0.000	T	0.312	3.553	18.12	3.17	0.707	3.401	7.485	3.552723	3.552723	0	0.347174	0.131304	NA	0.254	NA	13.2895594
332	1	186026474	186026474	T	C	exonic	HMCN1	NA	nonsynonymous SNV	HMCN1:NM_031935:exon46:c.T7253C:p.I2418T	exonic	ENSG00000143341	NA	nonsynonymous SNV	ENSG00000143341:ENST00000271588:exon46:c.T7253C:p.I2418T,ENSG00000143341:ENST00000367492:exon46:c.T7253C:p.I2418T	Score=567;Name=lod=270	NA	1q31.1	Score=857;Name=V$E4BP4_01	NA	NA	NA	rs12129650	0.55	0.55	0.552	0.529952	0.496	0.5675	0.6124	0.5393	0.455	0.51	0.6	0.6	0.52	0.5389	0.6	0.05	D	0.918	P	0.446	B	0.000	N	0.000	P	2.76	M	-0.64	T	-0.910	T	0.000	T	0.183	3.57	18.19	4.67	1.020	5.743	11.765	3.569521	3.569521	0.04	0.510116	0.555152	NA	0.514	NA	13.2883174
332	9	97055310	97055310	C	T	exonic	ZNF169	NA	nonsynonymous SNV	ZNF169:NM_194320:exon4:c.C215T:p.P72L	exonic	ENSG00000175787	NA	nonsynonymous SNV	ENSG00000175787:ENST00000375354:exon3:c.C215T:p.P72L,ENSG00000175787:ENST00000480716:exon3:c.C215T:p.P72L,ENSG00000175787:ENST00000481550:exon3:c.C215T:p.P72L,ENSG00000175787:ENST00000340911:exon4:c.C215T:p.P72L,ENSG00000175787:ENST00000395395:exon4:c.C215T:p.P72L	Score=289;Name=lod=20	NA	9q22.32	NA	NA	NA	NA	rs1536690	0.16	0.16	0.159	0.183506	0.1759	0.0565	0.1571	0.2526	0.2474	0.17	0.08	0.16	0.26	0.1862	0.26	0	D	0.997	D	0.88	P	.	.	0.000	P	1.815	L	5.45	T	-1.007	T	0.000	T	0.317	1.516	11.02	3.09	1.754	1.624	9.822	1.516372	1.516372	0	0.183488	0.246255	NA	0.159	NA	13.2877454
332	18	44559844	44559844	G	A	exonic	TCEB3B	NA	nonsynonymous SNV	TCEB3B:NM_016427:exon1:c.C1792T:p.P598S	exonic	ENSG00000206181	NA	nonsynonymous SNV	ENSG00000206181:ENST00000332567:exon1:c.C1792T:p.P598S	NA	NA	18q21.1	NA	NA	NA	NA	rs61743415	0.01	0.01	0.007	0.00758786	0.0209	0.006	0.0101	0.0008	0.0031	0.02	0.01	0.01	0.002	0.0119	0.02	0.01	D	0.99	D	0.929	D	0.003	N	1.000	N	2.745	M	1.46	T	-1.034	T	0.092	T	0.121	2.519	14.38	1.4	1.090	5.083	8.764	2.518739	2.518739	0.01	0.014302	0.004085	NA	0.022	NA	13.2862314
332	18	44560038	44560038	C	A	exonic	TCEB3B	NA	nonsynonymous SNV	TCEB3B:NM_016427:exon1:c.G1598T:p.C533F	exonic	ENSG00000206181	NA	nonsynonymous SNV	ENSG00000206181:ENST00000332567:exon1:c.G1598T:p.C533F	NA	NA	18q21.1	NA	NA	NA	NA	rs72921303	0.01	0.01	0.006	0.00758786	0.0209	0.006	0.0101	0.0008	0.0031	0.02	0.01	0.01	0.002	0.0119	0.02	0	D	1.0	D	0.999	D	0.792	N	0.976	N	2.38	M	1.12	T	-0.991	T	0.135	T	0.297	1.992	12.62	1.65	1.258	1.461	6.791	1.991813	1.991813	0	0.014535	0.004085	NA	0.022	NA	13.2859984
332	12	6153534	6153534	T	C	exonic	VWF	NA	nonsynonymous SNV	VWF:NM_000552:exon18:c.A2365G:p.T789A	exonic	ENSG00000110799	NA	nonsynonymous SNV	ENSG00000110799:ENST00000261405:exon18:c.A2365G:p.T789A	Score=525;Name=lod=181	Name=Coagulation factor levels	12p13.31	NA	Name=AP-2gamma,c-Myc,AP-2alpha,JunD,c-Fos	Name=29	NA	rs1063856	0.34	0.34	0.336	0.336262	0.3668	0.0913	0.2406	0.6377	0.2178	0.37	0.08	0.27	0.65	0.3232	0.65	1	T	0.0	B	0.0	B	0.040	N	0.000	P	-0.895	N	-2.64	D	-0.956	T	0.000	T	0.091	-0.204	3.009	2.17	0.446	0.890	9.244	-0.204232	NA	1	0.357442	0.568316	NA	0.442	CLINSIG=untested;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000086605.1;CLNDSDB=.;CLNDSDBID=.	13.2858914
332	4	46995366	46995366	G	T	exonic	GABRA4	NA	nonsynonymous SNV	GABRA4:NM_000809:exon1:c.C76A:p.L26M	exonic	ENSG00000109158	NA	nonsynonymous SNV	ENSG00000109158:ENST00000264318:exon1:c.C76A:p.L26M,ENSG00000109158:ENST00000502874:exon1:c.C76A:p.L26M	Score=682;Name=lod=787	NA	4p12	Score=884;Name=V$ELK1_01	Name=SUZ12	Name=16	NA	rs2229940	0.34	0.34	0.334	0.300719	0.3668	0.3879	0.2968	0.2526	0.2106	0.37	0.37	0.3	0.28	0.3144	0.37	0.09	T	0.091	B	0.103	B	0.108	N	0.808	P	0.695	N	-1.56	D	-1.052	T	0.000	T	0.206	2.179	13.24	2.98	0.588	2.533	6.801	2.178732	2.178732	0.01	0.366744	0.256922	ID=COSM1131120;OCCURENCE=1(prostate)	0.326	NA	13.2853894
333	17	8700982	8700982	C	T	exonic	MFSD6L	NA	nonsynonymous SNV	MFSD6L:NM_152599:exon1:c.G1457A:p.R486H	exonic	ENSG00000185156	NA	nonsynonymous SNV	ENSG00000185156:ENST00000329805:exon1:c.G1457A:p.R486H	Score=366;Name=lod=41	NA	17p13.1	NA	NA	NA	NA	rs2242373	0.18	0.18	0.205	0.19988	0.1759	0.1915	0.1182	0.2156	0.2699	0.17	0.18	0.14	0.22	0.1855	0.22	0.16	T	0.995	D	0.684	P	0.038	N	0.830	P	1.5	L	-3.48	D	-1.260	T	0.002	T	0.076	3.204	16.73	4.9	2.531	4.132	17.013	3.204461	3.204461	0.18	0.188953	0.208579	NA	0.217	NA	13.2829804
333	15	52521383	52521383	C	T	exonic	MYO5C	NA	nonsynonymous SNV	MYO5C:NM_018728:exon25:c.G3154A:p.V1052I	exonic	ENSG00000128833	NA	nonsynonymous SNV	ENSG00000128833:ENST00000261839:exon25:c.G3154A:p.V1052I	NA	NA	15q21.2	Score=769;Name=V$TAXCREB_02	Name=PU.1,eGFP-JunD,CEBPB,ELF1_(SC-631),HA-E2F1,c-Jun,ZEB1_(SC-25388),c-Myc,PAX5-C20	Name=47	NA	rs62623565	0.07	0.07	0.061	0.0754792	0.0099	0.1042	0.0576	0.1422	0.0358	0.01	0.11	0.04	0.13	0.0342	0.13	0.19	T	0.0	B	0.001	B	0.169	N	1.000	P	0.345	N	2.18	T	-1.010	T	0.000	T	0.004	0.51	6.767	-5.82	-0.981	-1.925	8.719	0.510495	NA	0.22	0.010073	0.117617	NA	0.065	NA	13.2791604
333	19	12089743	12089743	C	T	exonic	ZNF763	NA	nonsynonymous SNV	ZNF763:NM_001012753:exon4:c.C1013T:p.T338M	exonic	ENSG00000197054,ENSG00000267179	NA	nonsynonymous SNV	ENSG00000197054:ENST00000545530:exon2:c.C638T:p.T213M,ENSG00000197054:ENST00000343949:exon4:c.C1013T:p.T338M,ENSG00000197054:ENST00000358987:exon4:c.C1004T:p.T335M,ENSG00000197054:ENST00000538752:exon4:c.C1064T:p.T355M,ENSG00000267179:ENST00000590798:exon4:c.C1064T:p.T355M	Score=371;Name=lod=43	NA	19p13.2	NA	NA	NA	NA	rs7250795	0.02	0.02	0.018	0.019369	0.0229	0.006	0.0144	0.0257	0.0245	0.02	0.01	0.02	0.03	0.0168	0.03	0	D	0.965	D	0.408	B	.	.	1.000	N	2.92	M	1.74	T	-1.092	T	0.029	T	0.059	1.301	10.26	-2.81	-2.203	0.028	4.350	1.300818	1.300818	0	0.018385	0.02793	NA	0.014	NA	13.2752484
334	1	208390469	208390469	C	T	exonic	PLXNA2	NA	nonsynonymous SNV	PLXNA2:NM_025179:exon2:c.G799A:p.A267T	exonic	ENSG00000076356	NA	nonsynonymous SNV	ENSG00000076356:ENST00000367033:exon2:c.G799A:p.A267T	Score=444;Name=lod=85	NA	1q32.2	Score=916;Name=V$CDPCR3HD_01	Name=CTCF	NA	NA	rs3748735	0.14	0.14	0.144	0.139577	0.1988	0.1458	0.1715	0.0673	0.1472	0.18	0.14	0.15	0.07	0.1674	0.2	0.83	T	0.649	P	0.359	B	0.057	N	0.015	P	0	N	2.83	T	-0.945	T	0.000	T	0.115	2.435	14.1	4.91	1.433	3.531	14.088	2.434528	2.434528	0.03	0.196047	0.087608	NA	0.051	NA	13.2710864
334	11	95713077	95713077	C	T	exonic	MAML2	NA	nonsynonymous SNV	MAML2:NM_032427:exon5:c.G2506A:p.V836I	exonic	ENSG00000184384	NA	nonsynonymous SNV	ENSG00000184384:ENST00000524717:exon5:c.G2506A:p.V836I	Score=492;Name=lod=133	NA	11q21	NA	NA	NA	NA	rs34520053	0.01	0.01	0.007	0.0061901	0.0229	0.001	0.0014	NA	0.0061	0.02	NA	0.0028	NA	0.0192	0.025	0.41	T	0.176	B	0.07	B	0.000	D	0.812	D	0.345	N	0.93	T	-1.025	T	0.031	T	0.033	0.511	6.771	5.33	2.655	3.735	10.589	0.511215	NA	0.25	0.024515	0.006088	NA	0.007	NA	13.2667184
335	9	121971069	121971069	C	T	exonic	DBC1	NA	nonsynonymous SNV	DBC1:NM_014618:exon7:c.G1073A:p.R358H	exonic	ENSG00000078725	NA	nonsynonymous SNV	ENSG00000078725:ENST00000265922:exon7:c.G1073A:p.R358H	Score=514;Name=lod=163	NA	9q33.1	NA	NA	NA	NA	rs17476783	0.01	0.01	0.012	0.00778754	0.0298	NA	0.0086	0.0015	0.001	0.03	NA	0.01	0.002	0.0179	0.03	0.08	T	0.004	B	0.001	B	0.000	D	1.000	D	0.9	L	2.35	T	-1.113	T	0.015	T	0.119	3.533	18.03	5.79	2.731	3.797	19.032	3.532696	3.532696	0.08	0.026628	0.006128	NA	NA	NA	13.2590054
336	11	82895826	82895826	A	G	exonic	PCF11	NA	nonsynonymous SNV	PCF11:NM_015885:exon16:c.A4558G:p.S1520G	exonic	ENSG00000165494	NA	nonsynonymous SNV	ENSG00000165494:ENST00000298281:exon16:c.A4558G:p.S1520G	Score=697;Name=lod=904	NA	11q14.1	NA	NA	NA	NA	rs118001085	0.01	0.01	0.011	0.00978435	0.0288	NA	0.0245	0.0015	0.001	0.03	NA	0.02	NA	0.0211	0.032	.	.	0.01	B	0.026	B	0.000	D	0.985	D	1.1	L	1.69	T	-1.071	T	0.018	T	0.146	2.28	13.58	6.16	2.367	2.428	11.197	2.279966	2.279966	0.22	0.032168	0.005826	ID=COSM1196689,COSM1196688;OCCURENCE=1(lung)	NA	NA	13.2512654
336	11	6891113	6891113	A	G	exonic	OR10A2	NA	nonsynonymous SNV	OR10A2:NM_001004460:exon1:c.A128G:p.H43R	exonic	ENSG00000170790	NA	nonsynonymous SNV	ENSG00000170790:ENST00000307322:exon1:c.A128G:p.H43R	Score=289;Name=lod=20	NA	11p15.4	Score=754;Name=V$TAXCREB_02	NA	NA	NA	rs3930075	0.31	0.31	0.275	0.324281	0.3569	0.3135	0.3732	0.2073	0.4254	0.36	0.31	0.35	0.2	0.3533	0.37	0.02	D	0.001	B	0.002	B	0.002	N	0.936	P	2.265	M	2.38	T	-0.971	T	0.000	T	0.188	0.509	6.758	4.3	1.942	5.036	6.623	0.508631	NA	0.07	0.373487	0.201045	NA	0.261	NA	13.2496464
337	7	127668769	127668769	G	T	exonic	LRRC4	NA	nonsynonymous SNV	LRRC4:NM_022143:exon2:c.C1925A:p.T642N	exonic	ENSG00000128594	NA	nonsynonymous SNV	ENSG00000128594:ENST00000249363:exon2:c.C1925A:p.T642N	Score=749;Name=lod=1481	NA	7q32.1	NA	NA	NA	NA	rs117070316	0.02	0.02	0.008	0.0133786	0.0368	NA	0.0245	0.0053	0.0061	0.03	NA	0.03	0.0041	0.0211	0.031	0.04	D	0.047	B	0.012	B	0.000	U	1.000	D	1.59	L	1.01	T	-1.026	T	0.039	T	0.151	1.455	10.81	3.85	2.140	2.520	13.646	1.455145	1.455145	0.16	0.030814	0.007036	NA	0.014	NA	13.2446194
337	2	128388862	128388862	G	C	exonic	MYO7B	NA	nonsynonymous SNV	MYO7B:NM_001080527:exon36:c.G4941C:p.E1647D	exonic	ENSG00000169994	NA	nonsynonymous SNV	ENSG00000169994:ENST00000409090:exon12:c.G1500C:p.E500D,ENSG00000169994:ENST00000409816:exon35:c.G4941C:p.E1647D,ENSG00000169994:ENST00000389524:exon36:c.G4941C:p.E1647D,ENSG00000169994:ENST00000428314:exon36:c.G4941C:p.E1647D	Score=448;Name=lod=88	NA	2q14.3	Score=816;Name=V$OLF1_01	NA	NA	NA	rs13025959	0.14	0.14	0.138	0.168131	0.2018	0.1349	0.1239	0.0499	0.3589	0.2	0.15	0.13	0.05	0.198	0.2	0.35	T	0.849	P	0.276	B	0.000	D	0.001	P	1.47	L	-0.28	T	-1.054	T	0.000	T	0.422	1.856	12.16	4.89	1.447	2.170	6.796	1.855954	1.855954	0.14	0.188957	0.075463	NA	0.109	NA	13.2445764
338	1	226924642	226924642	C	T	exonic	ITPKB	NA	nonsynonymous SNV	ITPKB:NM_002221:exon2:c.G518A:p.R173H	exonic	ENSG00000143772	NA	nonsynonymous SNV	ENSG00000143772:ENST00000272117:exon1:c.G518A:p.R173H,ENSG00000143772:ENST00000366784:exon2:c.G518A:p.R173H,ENSG00000143772:ENST00000429204:exon2:c.G518A:p.R173H	Score=455;Name=lod=94	NA	1q42.12	Score=851;Name=V$ZID_01	NA	NA	NA	rs3754415	0.24	0.24	0.243	0.227037	0.2127	0.3393	0.2032	0.1694	0.2209	0.22	0.33	0.22	0.18	0.2073	0.33	0.06	T	0.946	P	0.224	B	0.000	D	0.418	P	0.805	L	1.24	T	-0.958	T	0.000	T	0.149	4.025	20.6	4.6	2.374	2.942	9.190	4.025053	4.025053	0.05	0.181893	0.176162	ID=COSM425466;OCCURENCE=1(breast)	0.326	NA	13.2314404
338	16	58743454	58743454	A	C	exonic	GOT2	NA	nonsynonymous SNV	GOT2:NM_002080:exon9:c.T1037G:p.V346G	exonic	ENSG00000125166	NA	nonsynonymous SNV	ENSG00000125166:ENST00000434819:exon8:c.T908G:p.V303G,ENSG00000125166:ENST00000245206:exon9:c.T1037G:p.V346G	Score=501;Name=lod=145	NA	16q21	Score=796;Name=V$BACH1_01	Name=ERalpha_a	Name=11	NA	rs30842	0.74	0.74	0.728	0.755192	0.7097	0.6607	0.7824	0.8994	0.6851	0.69	0.66	0.77	0.89	0.7117	0.89	.	.	0.0	B	0.0	B	0.000	N	0.642	P	-1.64	N	-2.64	D	-0.944	T	0.000	T	0.125	-0.149	3.27	5.31	1.252	3.160	14.655	-0.149293	NA	0.55	0.686163	0.86101	NA	0.826	NA	13.2257704
339	15	65676726	65676726	C	T	exonic	IGDCC4	NA	nonsynonymous SNV	IGDCC4:NM_020962:exon20:c.G3374A:p.C1125Y	exonic	ENSG00000103742	NA	nonsynonymous SNV	ENSG00000103742:ENST00000352385:exon20:c.G3374A:p.C1125Y	Score=475;Name=lod=114	NA	15q22.31	NA	NA	NA	NA	rs33918653	0.26	0.26	0.243	0.234026	0.1869	0.4444	0.2579	0.1475	0.1656	0.19	0.46	0.22	0.14	0.2264	0.46	0.05	D	0.981	D	0.592	P	0.002	N	0.113	P	1.5	L	0.22	T	-0.916	T	0.000	T	0.274	3.708	18.83	4.27	1.187	2.349	10.550	3.707798	3.707798	0	0.195278	0.139936	NA	0.275	NA	13.2247554
339	1	19595194	19595194	A	G	ncRNA_exonic	AKR7L	NA	NA	NA	exonic	ENSG00000211454	NA	nonsynonymous SNV	ENSG00000211454:ENST00000420396:exon4:c.T172C:p.F58L	Score=467;Name=lod=105	NA	1p36.13	NA	NA	NA	NA	rs75616155	0.12	0.12	0.114	0.115016	0.0944	NA	0.0778	0.3154	0.0102	0.09	NA	0.09	0.3	0.0868	0.3	0.01	D	0.824	P	0.654	P	0.000	D	0.978	P	.	.	3.77	T	-0.908	T	0.000	T	0.254	3.442	17.65	3.49	1.587	8.284	11.225	3.442406	3.442406	0.01	0.094651	0.274626	NA	0.138	NA	13.224149
339	16	2018578	2018578	C	G	exonic	RNF151	NA	nonsynonymous SNV	RNF151:NM_174903:exon4:c.C390G:p.H130Q	exonic	ENSG00000179580	NA	nonsynonymous SNV	ENSG00000179580:ENST00000321392:exon3:c.C387G:p.H129Q,ENSG00000179580:ENST00000569714:exon4:c.C390G:p.H130Q	NA	NA	16p13.3	NA	NA	NA	NA	rs45488492	0.04	0.04	0.028	0.0503195	0.0239	NA	0.0245	0.0991	0.0818	0.03	NA	0.02	0.11	0.0563	0.11	0	D	1.0	D	0.999	D	0.000	D	0.000	P	2.865	M	-3.1	D	-0.337	T	0.111	T	0.341	1.619	11.37	0.546	0.235	-0.044	7.805	1.61932	1.61932	0	0.029028	0.079597	NA	0.043	NA	13.2241054
340	16	75690279	75690279	A	G	exonic	TERF2IP	NA	nonsynonymous SNV	TERF2IP:NM_018975:exon3:c.A970G:p.K324E	exonic	ENSG00000166848	NA	nonsynonymous SNV	ENSG00000166848:ENST00000300086:exon3:c.A970G:p.K324E	Score=519;Name=lod=171	NA	16q23.1	NA	NA	NA	NA	rs4888444	0.02	0.02	0.016	0.0229633	0.0398	0.001	0.0288	0.0015	0.0532	0.04	NA	0.04	0.002	0.0351	0.046	1	T	0.008	B	0.005	B	0.000	D	0.704	D	-0.625	N	1.11	T	-1.027	T	0.006	T	0.092	0.193	5.039	4.63	2.183	2.219	6.293	0.192905	NA	1	0.046395	0.008872	NA	0.022	NA	13.2120384
340	11	89880604	89880604	G	A	exonic	NAALAD2	NA	nonsynonymous SNV	NAALAD2:NM_005467:exon3:c.G301A:p.V101I	exonic	ENSG00000077616	NA	nonsynonymous SNV	ENSG00000077616:ENST00000321955:exon3:c.G301A:p.V101I,ENSG00000077616:ENST00000375944:exon3:c.G301A:p.V101I,ENSG00000077616:ENST00000525171:exon3:c.G301A:p.V101I,ENSG00000077616:ENST00000526637:exon3:c.G139A:p.V47I,ENSG00000077616:ENST00000527493:exon3:c.G301A:p.V101I,ENSG00000077616:ENST00000534061:exon3:c.G301A:p.V101I	Score=552;Name=lod=233	NA	11q14.3	NA	NA	NA	NA	rs11018879	0.04	0.04	0.025	0.0373403	0.0437	0.0694	0.0331	0.0023	0.0481	0.04	0.06	0.04	0.002	0.0393	0.06	.	.	0.034	B	0.007	B	0.003	N	1.000	D	2.33	M	1.36	T	-1.056	T	0.022	T	0.053	3.03	16.11	4.12	1.242	6.121	14.076	3.030389	3.030389	0.24	0.038381	0.009087	NA	0.014	NA	13.2119524
340	13	25887811	25887811	T	C	exonic	NUPL1	NA	nonsynonymous SNV	NUPL1:NM_001008564:exon4:c.T460C:p.S154P,NUPL1:NM_014089:exon5:c.T496C:p.S166P	exonic	ENSG00000139496	NA	nonsynonymous SNV	ENSG00000139496:ENST00000394327:exon3:c.T337C:p.S113P,ENSG00000139496:ENST00000381718:exon4:c.T460C:p.S154P,ENSG00000139496:ENST00000381736:exon5:c.T496C:p.S166P,ENSG00000139496:ENST00000381747:exon5:c.T496C:p.S166P,ENSG00000139496:ENST00000463407:exon5:c.T496C:p.S166P	Score=489;Name=lod=129	NA	13q12.13	NA	NA	NA	NA	rs12871608	0.02	0.02	0.013	0.0147764	0.0517	NA	0.0101	0.0053	0.0082	0.05	NA	0.01	0.01	0.0294	0.05	0.08	T	0.005	B	0.009	B	0.000	D	1.000	D	1.78	L	1.37	T	-1.084	T	0.026	T	0.308	3.395	17.46	4.64	1.041	2.613	12.062	3.395078	3.395078	0.03	0.043488	0.008171	NA	0.007	NA	13.2087454
340	4	106156163	106156163	G	A	exonic	TET2	NA	nonsynonymous SNV	TET2:NM_001127208:exon3:c.G1064A:p.G355D,TET2:NM_017628:exon3:c.G1064A:p.G355D	exonic	ENSG00000168769	NA	nonsynonymous SNV	ENSG00000168769:ENST00000413648:exon2:c.G1064A:p.G355D,ENSG00000168769:ENST00000265149:exon3:c.G1064A:p.G355D,ENSG00000168769:ENST00000305737:exon3:c.G1064A:p.G355D,ENSG00000168769:ENST00000380013:exon3:c.G1064A:p.G355D,ENSG00000168769:ENST00000394764:exon3:c.G1064A:p.G355D,ENSG00000168769:ENST00000513237:exon3:c.G1127A:p.G376D,ENSG00000168769:ENST00000540549:exon3:c.G1064A:p.G355D,ENSG00000168769:ENST00000545826:exon3:c.G1064A:p.G355D	Score=405;Name=lod=59	NA	4q24	NA	NA	NA	NA	rs61744960	0.02	0.02	0.022	0.0167732	0.0557	NA	0.0231	0.0023	0.0092	0.06	NA	0.02	0.002	0.0268	0.06	0.01	D	0.944	P	0.79	P	0.000	N	0.999	N	0.805	L	4.26	T	-0.996	T	0.004	T	0.473	3.225	16.81	3.11	1.099	3.430	9.100	3.224528	3.224528	0.01	0.043721	0.007036	NA	0.014	NA	13.2071124
341	5	90151589	90151589	G	A	exonic	GPR98	NA	nonsynonymous SNV	GPR98:NM_032119:exon82:c.G17626A:p.V5876I	exonic	ENSG00000164199	NA	nonsynonymous SNV	ENSG00000164199:ENST00000425867:exon18:c.G4609A:p.V1537I,ENSG00000164199:ENST00000405460:exon82:c.G17626A:p.V5876I	Score=594;Name=lod=346	NA	5q14.3	NA	NA	Name=4	NA	rs2247870	0.5	0.5	0.444	0.459065	0.5606	0.5665	0.6931	0.1309	0.5215	0.57	0.58	0.67	0.15	0.5393	0.67	.	.	0.576	P	0.178	B	0.000	D	0.000	P	1.295	L	-0.46	T	-0.916	T	0.000	T	0.053	1.992	12.62	4.64	1.465	2.899	11.347	1.991585	1.991585	0.13	0.547222	0.195216	ID=COSM149886;OCCURENCE=1(stomach)	0.435	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000039547.1;CLNDSDB=.;CLNDSDBID=.	13.1862114
342	12	52994896	52994896	A	G	exonic	KRT72	NA	nonsynonymous SNV	KRT72:NM_001146225:exon1:c.T341C:p.M114T,KRT72:NM_001146226:exon1:c.T341C:p.M114T,KRT72:NM_080747:exon1:c.T341C:p.M114T	exonic	ENSG00000170486	NA	nonsynonymous SNV	ENSG00000170486:ENST00000293745:exon1:c.T341C:p.M114T,ENSG00000170486:ENST00000354310:exon1:c.T341C:p.M114T,ENSG00000170486:ENST00000537672:exon1:c.T341C:p.M114T	Score=542;Name=lod=212	NA	12q13.13	Score=855;Name=V$ZID_01	NA	NA	NA	rs56207115	0.08	0.08	0.081	0.0802716	0.0477	0.0218	0.0576	0.1982	0.0307	0.04	0.02	0.07	0.18	0.0516	0.18	0	D	0.001	B	0.013	B	0.023	N	0.000	P	0	N	-0.89	T	-1.059	T	0.000	T	0.407	3.124	16.44	4.49	2.244	9.084	14.843	3.123859	3.123859	0	0.049651	0.164775	NA	0.109	NA	13.1843824
342	2	10908893	10908893	A	G	exonic	ATP6V1C2	NA	nonsynonymous SNV	ATP6V1C2:NM_001039362:exon6:c.A427G:p.N143D,ATP6V1C2:NM_144583:exon6:c.A427G:p.N143D	exonic	ENSG00000143882	NA	nonsynonymous SNV	ENSG00000143882:ENST00000272238:exon6:c.A427G:p.N143D,ENSG00000143882:ENST00000381661:exon6:c.A427G:p.N143D	Score=419;Name=lod=67	NA	2p25.1	NA	NA	NA	NA	rs1198849	0.44	0.44	0.407	0.452476	0.3648	0.6597	0.438	0.3434	0.4867	0.38	0.62	0.44	0.34	0.4212	0.62	0.01	D	0.112	B	0.266	B	0.000	D	0.001	P	3.265	M	0.6	T	-0.934	T	0.000	T	0.054	2.63	14.76	4.48	0.951	5.384	10.718	2.630472	2.630472	0.01	0.370465	0.332047	NA	0.319	NA	13.1768684
342	13	44411432	44411432	A	G	exonic	CCDC122	NA	nonsynonymous SNV	CCDC122:NM_144974:exon7:c.T806C:p.I269T	exonic	ENSG00000151773	NA	nonsynonymous SNV	ENSG00000151773:ENST00000444614:exon7:c.T806C:p.I269T	NA	NA	13q14.11	NA	Name=CEBPB	NA	NA	rs9567280	0.06	0.06	0.048	0.061901	0.0577	0.1111	0.0447	0.0023	0.1084	0.06	0.11	0.04	0.0041	0.0524	0.11	0.01	D	0.835	P	0.466	P	.	.	0.000	P	1.78	L	0.9	T	-1.005	T	0.004	T	0.246	2.92	15.73	5.35	2.143	4.507	13.008	2.919662	2.919662	0.01	0.047456	0.006702	NA	0.014	NA	13.1757774
343	6	26056604	26056604	G	A	exonic	HIST1H1C	NA	nonsynonymous SNV	HIST1H1C:NM_005319:exon1:c.C53T:p.A18V	exonic	ENSG00000187837	NA	nonsynonymous SNV	ENSG00000187837:ENST00000343677:exon1:c.C53T:p.A18V	Score=349;Name=lod=35	NA	6p22.2	Score=829;Name=V$OLF1_01	Name=PAX5-C20,POU5F1_(SC-9081),Oct-2,SRF,CCNT2,FOSL1_(SC-183),c-Myc,ZBTB7A_(SC-34508),BCL3,HEY1,ZEB1_(SC-25388),NFKB,ELF1_(SC-631),TBP,CHD2_(N-1250),BATF,GATA2_(CG2-96),GTF2F1_(RAP-74),p300_(N-15),GTF2B,USF-1,TCF12,Nrf1,EBF1_(C-8),POU2F2,ZBTB33,GABP,HMGN3,ETS1,E2F6_(H-50),Pol2(b),TAF1,GATA-1,FOSL2,JunD,p300_(F-4),SP2_(SC-643),TAF7_(SQ-8),BCLAF1_(M33-P5B11),YY1_(C-20),Sin3Ak-20,eGFP-JunD,Pol2-4H8,SP1,NRSF,Pol2,GCN5,MEF2C_(SC-13268),Egr-1,Pol2(phosphoS2),YY1	Name=148	NA	rs2230653	0.19	0.19	0.139	0.17492	0.0308	0.5089	0.2233	0.0008	0.18	0.04	0.55	0.18	0.002	0.1051	0.55	0.11	T	0.0	B	0.001	B	0.400	N	0.688	P	0	N	2.87	T	-0.966	T	0.008	T	0.122	0.976	8.984	4.85	0.896	3.457	16.939	0.976138	NA	0.2	0.022934	0.009099	NA	0.08	NA	13.1744994
343	11	6221214	6221214	T	A	exonic	OR52W1	NA	nonsynonymous SNV	OR52W1:NM_001005178:exon1:c.T761A:p.L254Q	exonic	ENSG00000175485	NA	nonsynonymous SNV	ENSG00000175485:ENST00000311352:exon1:c.T761A:p.L254Q	Score=516;Name=lod=167	NA	11p15.4	NA	NA	NA	NA	rs11040799	0.62	0.62	0.586	0.569888	0.7475	0.7976	0.598	0.2133	0.6145	0.74	0.78	0.67	0.22	0.6795	0.78	0	D	0.999	D	0.972	D	0.009	N	0.112	P	3.315	M	1.02	T	-0.965	T	0.000	T	0.293	3.358	17.31	5.11	2.036	3.012	14.368	3.357877	3.357877	0.01	0.73615	0.302135	NA	0.616	NA	13.1701834
343	1	47607785	47607785	G	A	exonic	CYP4A22	NA	nonsynonymous SNV	CYP4A22:NM_001010969:exon4:c.G388A:p.G130S	exonic	ENSG00000162365	NA	nonsynonymous SNV	ENSG00000162365:ENST00000294337:exon4:c.G388A:p.G130S,ENSG00000162365:ENST00000371890:exon4:c.G388A:p.G130S,ENSG00000162365:ENST00000371891:exon4:c.G388A:p.G130S	Score=300;Name=lod=22	NA	1p33	NA	NA	NA	NA	rs2056900	0.29	0.29	0.295	0.336262	0.1928	0.5546	0.232	0.2073	0.5072	0.19	0.55	0.24	0.2	0.2694	0.55	0.01	D	0.997	D	0.893	P	0.000	D	0.001	P	2.875	M	-0.65	T	-0.924	T	0.000	T	0.327	3.738	18.98	0.679	0.034	3.218	8.275	3.738385	3.738385	0.02	0.201512	0.228098	NA	0.21	NA	13.1696214
343	11	27384585	27384585	G	A	exonic	CCDC34	NA	nonsynonymous SNV	CCDC34:NM_030771:exon1:c.C157T:p.P53S,CCDC34:NM_080654:exon1:c.C157T:p.P53S	exonic	ENSG00000109881	NA	nonsynonymous SNV	ENSG00000109881:ENST00000317945:exon1:c.C157T:p.P53S,ENSG00000109881:ENST00000328697:exon1:c.C157T:p.P53S	NA	NA	11p14.1	NA	Name=Max,CHD2_(N-1250),TAF1,Pol2,E2F6,USF1_(SC-8983),HEY1,c-Myc,USF-1,HA-E2F1	Name=4	NA	rs11549824	0.04	0.04	0.026	0.0295527	0.0557	0.002	0.0418	0.0408	0.0072	0.06	NA	0.05	0.04	0.0511	0.06	0.53	T	0.893	P	0.461	P	0.078	N	1.000	P	0.55	N	3.23	T	-1.042	T	0.008	T	0.12	0.926	8.772	2.08	1.060	0.962	8.599	0.926153	NA	0.36	0.059084	0.041326	ID=COSM428874,COSM428873;OCCURENCE=1(breast)	0.029	NA	13.1674494
343	17	78184679	78184679	C	T	exonic	SGSH	NA	nonsynonymous SNV	SGSH:NM_000199:exon8:c.G1081A:p.V361I	exonic	ENSG00000181523	NA	nonsynonymous SNV	ENSG00000181523:ENST00000534910:exon7:c.G472A:p.V158I,ENSG00000181523:ENST00000326317:exon8:c.G1081A:p.V361I	Score=586;Name=lod=322	NA	17q25.3	NA	NA	NA	NA	rs9894254	0.07	0.07	0.086	0.0634984	0.0616	NA	0.0403	0.1573	0.0204	0.06	NA	0.04	0.18	0.0536	0.18	0.24	T	0.065	B	0.127	B	0.000	D	0.000	P	1.17	L	-1.39	T	-1.014	T	0.001	T	0.126	3.261	16.94	4.45	2.009	3.164	16.696	3.260852	3.260852	0.21	0.050814	0.14276	NA	0.043	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000078348.1;CLNDSDB=.;CLNDSDBID=.	13.1673194
344	19	12876964	12876964	G	C	exonic	HOOK2	NA	nonsynonymous SNV	HOOK2:NM_001100176:exon15:c.C1464G:p.H488Q,HOOK2:NM_013312:exon15:c.C1464G:p.H488Q	exonic	ENSG00000095066	NA	nonsynonymous SNV	ENSG00000095066:ENST00000264827:exon15:c.C1464G:p.H488Q,ENSG00000095066:ENST00000397668:exon15:c.C1464G:p.H488Q	Score=510;Name=lod=157	NA	19p13.2	Score=946;Name=V$LMO2COM_01	Name=CTCFL_(SC-98982),Znf143_(16618-1-AP),Pol2(phosphoS2),SMC3_(ab9263),YY1_(C-20),Rad21,ELF1_(SC-631),CTCF,ZNF263,ZEB1_(SC-25388),PAX5-C20,CTCF_(C-20)	Name=132	NA	rs897804	0.27	0.27	0.249	0.216853	0.4394	0.2321	0.2939	0.0325	0.1667	0.45	0.21	0.33	0.04	0.3365	0.45	0.44	T	0.013	B	0.01	B	0.056	N	0.476	P	-0.14	N	2.4	T	-0.908	T	0.000	T	0.024	2.256	13.5	3.69	2.174	1.363	6.3	2.255926	2.255926	0.48	0.393645	0.083592	ID=COSM438629;OCCURENCE=1(breast)	0.196	NA	13.1637884
344	4	38776491	38776491	T	G	exonic	TLR10	NA	nonsynonymous SNV	TLR10:NM_001017388:exon2:c.A721C:p.N241H,TLR10:NM_001195106:exon3:c.A721C:p.N241H,TLR10:NM_001195107:exon3:c.A721C:p.N241H,TLR10:NM_001195108:exon3:c.A679C:p.N227H,TLR10:NM_030956:exon4:c.A721C:p.N241H	exonic	ENSG00000174123	NA	nonsynonymous SNV	ENSG00000174123:ENST00000361424:exon2:c.A721C:p.N241H,ENSG00000174123:ENST00000506111:exon2:c.A721C:p.N241H,ENSG00000174123:ENST00000508334:exon2:c.A721C:p.N241H,ENSG00000174123:ENST00000308973:exon4:c.A721C:p.N241H	NA	NA	4p14	NA	NA	NA	NA	rs11096957	0.48	0.48	0.5	0.5	0.3976	0.5546	0.4179	0.5492	0.5409	0.37	0.62	0.41	0.55	0.4301	0.66	0.02	D	0.864	P	0.669	P	0.004	N	1.000	P	2.28	M	-1.73	D	-0.915	T	0.000	T	0.055	0.994	9.059	4.91	1.841	0.982	14.544	0.993939	NA	0	0.34314	0.506355	NA	0.594	NA	13.1624934
344	7	150645534	150645534	T	G	exonic	KCNH2	NA	nonsynonymous SNV	KCNH2:NM_172057:exon7:c.A1670C:p.K557T,KCNH2:NM_000238:exon11:c.A2690C:p.K897T	exonic	ENSG00000055118	NA	nonsynonymous SNV	ENSG00000055118:ENST00000330883:exon7:c.A1670C:p.K557T,ENSG00000055118:ENST00000392968:exon9:c.A2402C:p.K801T,ENSG00000055118:ENST00000262186:exon11:c.A2690C:p.K897T	Score=399;Name=lod=56	NA	7q36.1	NA	NA	Name=3	NA	rs1805123	0.13	0.13	0.111	0.136182	0.2535	0.0536	0.17	0.0068	0.2515	0.24	0.03	0.2	0.02	0.1871	0.24	0.11	T	0.952	P	0.305	B	0.004	N	0.000	P	1.935	M	-4.79	D	-1.076	T	0.002	T	0.403	2.663	14.87	-0.036	-0.079	2.069	7.206	2.663067	2.663067	0.17	0.232558	0.045166	ID=COSM1449213;OCCURENCE=1(large_intestine)	0.109	CLINSIG=unknown;CLNDBN=not_provided;CLNREVSTAT=single;CLNACC=RCV000058152.2;CLNDSDB=.;CLNDSDBID=.	13.1601754
344	1	247752161	247752161	T	C	exonic	OR2G2	NA	nonsynonymous SNV	OR2G2:NM_001001915:exon1:c.T500C:p.L167P	exonic	ENSG00000177489	NA	nonsynonymous SNV	ENSG00000177489:ENST00000320065:exon1:c.T500C:p.L167P	Score=329;Name=lod=29	NA	1q44	NA	NA	NA	NA	rs10925085	0.35	0.35	0.329	0.307508	0.4125	0.5228	0.3501	0.0582	0.2843	0.41	0.53	0.35	0.06	0.3623	0.53	0	D	0.999	D	0.99	D	0.009	U	0.726	P	2.865	M	8.48	T	-1.097	T	0.000	T	0.385	2.655	14.84	4.29	1.789	0.342	11.468	2.655025	2.655025	0	0.402791	0.105538	NA	0.297	NA	13.1557424
344	7	45217015	45217015	T	C	exonic	RAMP3	NA	nonsynonymous SNV	RAMP3:NM_005856:exon2:c.T166C:p.W56R	exonic	ENSG00000122679	NA	nonsynonymous SNV	ENSG00000122679:ENST00000242249:exon2:c.T166C:p.W56R,ENSG00000122679:ENST00000481345:exon2:c.T166C:p.W56R,ENSG00000122679:ENST00000496212:exon2:c.T166C:p.W56R	Score=393;Name=lod=53	NA	7p13	Score=931;Name=V$CEBPB_02	NA	NA	NA	rs2074654	0.06	0.06	0.057	0.0640974	0.0547	0.1071	0.0807	0.0234	0.0726	0.05	0.1	0.09	0.02	0.0637	0.1	0.02	D	1.0	D	1.0	D	0.000	N	0.023	P	3.03	M	0.39	T	-0.822	T	0.015	T	0.232	2.838	15.45	1.79	0.075	0.834	6.103	2.838217	2.838217	0.04	0.059767	0.026328	ID=COSM150281;OCCURENCE=1(stomach)	0.123	NA	13.1551664
345	7	148963652	148963652	C	T	exonic	ZNF783	NA	nonsynonymous SNV	ZNF783:NM_001195220:exon2:c.C251T:p.T84I	exonic	ENSG00000204946	NA	nonsynonymous SNV	ENSG00000204946:ENST00000378052:exon2:c.C251T:p.T84I,ENSG00000204946:ENST00000434415:exon2:c.C251T:p.T84I,ENSG00000204946:ENST00000476295:exon2:c.C251T:p.T84I	Score=309;Name=lod=24	NA	7q36.1	NA	NA	NA	NA	rs61729506	0.06	0.06	0.057	0.0549121	0.0557	NA	0.0706	0.1241	0.0061	0.06	NA	0.09	0.11	0.0555	0.11	0	D	.	.	.	.	0.004	N	0.000	P	2.515	M	1.82	T	-1.034	T	0.003	T	0.146	2.449	14.15	3.62	2.190	0.985	8.745	2.448779	2.448779	0	0.069767	0.106673	NA	0.043	NA	13.1523664
346	16	22319517	22319517	T	G	exonic	POLR3E	NA	nonsynonymous SNV	POLR3E:NM_001258035:exon3:c.T28G:p.S10A,POLR3E:NM_001258033:exon4:c.T136G:p.S46A,POLR3E:NM_001258036:exon4:c.T136G:p.S46A,POLR3E:NM_018119:exon4:c.T136G:p.S46A	exonic	ENSG00000058600	NA	nonsynonymous SNV	ENSG00000058600:ENST00000563024:exon3:c.T28G:p.S10A,ENSG00000058600:ENST00000564750:exon3:c.T136G:p.S46A,ENSG00000058600:ENST00000299853:exon4:c.T136G:p.S46A,ENSG00000058600:ENST00000359210:exon4:c.T136G:p.S46A,ENSG00000058600:ENST00000564209:exon4:c.T136G:p.S46A,ENSG00000058600:ENST00000565358:exon4:c.T154G:p.S52A,ENSG00000058600:ENST00000564883:exon5:c.T136G:p.S46A	Score=542;Name=lod=212	NA	16p12.2	NA	NA	NA	NA	rs2347	0.03	0.03	0.026	0.0513179	0.0716	0.003	0.0274	0.0106	0.1524	0.07	0.0017	0.04	0.01	0.0613	0.07	0	D	0.153	B	0.07	B	0.041	N	1.000	D	0.535	N	0.85	T	-1.090	T	0.010	T	0.58	2.249	13.48	5.6	2.145	3.172	14.808	2.248808	2.248808	0.36	0.057093	0.015476	NA	0.029	NA	13.1433404
346	7	100374087	100374087	A	G	exonic	ZAN	NA	unknown	UNKNOWN	exonic	ENSG00000146839	NA	nonsynonymous SNV	ENSG00000146839:ENST00000538115:exon34:c.A6215G:p.N2072S,ENSG00000146839:ENST00000542585:exon34:c.A6215G:p.N2072S,ENSG00000146839:ENST00000546213:exon34:c.A1748G:p.N583S,ENSG00000146839:ENST00000546292:exon34:c.A6215G:p.N2072S	Score=420;Name=lod=68	NA	7q22.1	NA	NA	NA	NA	rs314300	0.28	0.28	0.26	0.245208	0.5408	0.0327	0.2839	0.1316	0.2863	0.54	0.03	0.31	0.15	0.4658	0.54	0.01	D	1.0	D	0.998	D	0.000	D	0.815	P	.	.	-0.14	T	-0.871	T	0.000	T	0.216	2.766	15.21	4.82	2.118	7.130	11.376	2.765624	2.765624	NA	0.520843	0.196909	NA	0.312	NA	13.1392237
346	3	37574951	37574951	G	A	exonic	ITGA9	NA	nonsynonymous SNV	ITGA9:NM_002207:exon14:c.G1520A:p.G507E	exonic	ENSG00000144668	NA	nonsynonymous SNV	ENSG00000144668:ENST00000264741:exon14:c.G1520A:p.G507E,ENSG00000144668:ENST00000422441:exon14:c.G1520A:p.G507E	Score=395;Name=lod=54	NA	3p22.2	Score=768;Name=V$STAT5A_02	NA	NA	NA	rs267561	0.61	0.61	0.574	0.559105	0.5427	0.8046	0.6844	0.4486	0.3834	0.54	0.82	0.7	0.42	0.5728	0.82	0.35	T	0.529	P	0.443	B	0.000	D	0.000	P	2.31	M	0.85	T	-1.034	T	0.000	T	0.407	3.787	19.23	5.86	2.775	7.753	20.186	3.78746	3.78746	0	0.580349	0.471403	NA	0.63	NA	13.1374844
347	16	84485677	84485677	T	A	exonic	ATP2C2	NA	nonsynonymous SNV	ATP2C2:NM_014861:exon18:c.T1811A:p.L604Q	exonic	ENSG00000064270	NA	nonsynonymous SNV	ENSG00000064270:ENST00000262429:exon18:c.T1811A:p.L604Q,ENSG00000064270:ENST00000416219:exon18:c.T1811A:p.L604Q	Score=435;Name=lod=78	NA	16q24.1	NA	NA	NA	NA	rs62640926	0.04	0.04	0.023	0.0291534	0.0765	0.0069	0.0447	0.0068	0.0225	0.07	0.0017	0.07	0.01	0.0497	0.072	0.98	T	0.01	B	0.042	B	0.000	D	0.994	D	-0.38	N	-3.8	D	-0.563	T	0.105	T	0.226	0.143	4.768	3.95	0.753	6.105	10.453	0.142831	NA	0.53	0.072406	0.019941	NA	0.065	NA	13.1347274
347	3	10264480	10264480	C	G	exonic	IRAK2	NA	nonsynonymous SNV	IRAK2:NM_001570:exon9:c.C1174G:p.L392V	exonic	ENSG00000134070	NA	nonsynonymous SNV	ENSG00000134070:ENST00000256458:exon9:c.C1174G:p.L392V	Score=481;Name=lod=120	NA	3p25.3	NA	NA	NA	NA	rs3844283	0.3	0.3	0.286	0.288139	0.4185	0.1339	0.464	0.2126	0.2904	0.44	0.15	0.44	0.18	0.3612	0.44	0.03	D	1.0	D	0.998	D	0.002	N	0.000	P	1.76	L	1.35	T	-0.918	T	0.000	T	0.167	3.812	19.36	5.14	2.369	1.933	14.105	3.812335	3.812335	0	0.419186	0.232864	NA	0.435	NA	13.1344474
347	9	21816758	21816758	G	A	exonic	MTAP	NA	nonsynonymous SNV	MTAP:NM_002451:exon3:c.G166A:p.V56I	exonic	ENSG00000099810,ENSG00000264545	NA	nonsynonymous SNV	ENSG00000099810:ENST00000380172:exon3:c.G166A:p.V56I,ENSG00000264545:ENST00000404796:exon3:c.G166A:p.V56I,ENSG00000099810:ENST00000460874:exon3:c.G217A:p.V73I,ENSG00000099810:ENST00000580718:exon3:c.G166A:p.V56I,ENSG00000099810:ENST00000580900:exon3:c.G166A:p.V56I	Score=588;Name=lod=327	NA	9p21.3	NA	NA	NA	NA	rs7023954	0.41	0.41	0.372	0.388179	0.3946	0.4375	0.4438	0.4334	0.2301	0.4	0.4	0.41	0.44	0.3944	0.44	0.09	T	0.179	B	0.182	B	0.000	D	0.000	P	2.38	M	-2.6	D	-1.124	T	0.000	T	0.279	3.406	17.5	5.44	2.711	6.620	18.392	3.405531	3.405531	0.11	0.415	0.434862	NA	0.406	NA	13.1293334
348	1	153277423	153277423	C	T	exonic	PGLYRP3	NA	nonsynonymous SNV	PGLYRP3:NM_052891:exon3:c.G376A:p.G126S	exonic	ENSG00000159527	NA	nonsynonymous SNV	ENSG00000159527:ENST00000290722:exon3:c.G376A:p.G126S	Score=295;Name=lod=21	NA	1q21.3	Score=878;Name=V$GATA1_04	NA	NA	NA	rs843971	0.45	0.45	0.455	0.469848	0.3996	0.5833	0.4553	0.385	0.5501	0.38	0.55	0.45	0.44	0.4235	0.55	.	.	0.911	P	0.6	P	0.000	D	0.428	P	1.11	L	2.6	T	-1.058	T	0.022	T	0.228	2.989	15.97	4.48	2.307	2.539	12.509	2.988634	2.988634	0.1	0.385581	0.383568	NA	0.457	NA	13.1246524
348	1	228412228	228412228	G	A	exonic	OBSCN	NA	nonsynonymous SNV	OBSCN:NM_001098623:exon9:c.G2722A:p.A908T,OBSCN:NM_052843:exon9:c.G2722A:p.A908T,OBSCN:NM_001271223:exon10:c.G2998A:p.A1000T	exonic	ENSG00000154358	NA	nonsynonymous SNV	ENSG00000154358:ENST00000284548:exon9:c.G2722A:p.A908T,ENSG00000154358:ENST00000422127:exon9:c.G2722A:p.A908T,ENSG00000154358:ENST00000570156:exon10:c.G2998A:p.A1000T	Score=325;Name=lod=28	NA	1q42.13	NA	NA	NA	NA	rs1757153	0.26	0.26	NA	0.284145	0.3618	0.1756	0.3559	0.3351	0.1963	0.3	0.16	0.33	0.25	0.3471	0.33	0.28	T	0.978	D	0.695	P	0.006	N	0.000	P	2.64	M	3.36	T	-0.879	T	0.000	T	0.224	1.944	12.46	3.5	1.211	2.707	12.898	1.944173	1.944173	NA	NA	NA	NA	NA	NA	13.1244334
348	1	48764419	48764419	C	T	exonic	SPATA6	NA	nonsynonymous SNV	SPATA6:NM_019073:exon13:c.G1433A:p.C478Y	exonic	ENSG00000132122	NA	nonsynonymous SNV	ENSG00000132122:ENST00000396199:exon12:c.G1217A:p.C406Y,ENSG00000132122:ENST00000371843:exon13:c.G1385A:p.C462Y,ENSG00000132122:ENST00000371847:exon13:c.G1433A:p.C478Y	Score=600;Name=lod=366	NA	1p33	NA	NA	NA	NA	rs1056042	0.31	0.31	0.297	0.273962	0.4254	0.3492	0.3329	0.025	0.3354	0.43	0.36	0.35	0.05	0.3636	0.43	0.15	T	0.997	D	0.994	D	0.000	D	0.104	P	0.69	N	2.64	T	-0.865	T	0.000	T	0.858	3.846	19.54	4.78	2.474	1.488	13.188	3.846395	3.846395	0.07	0.421395	0.08897	ID=COSM146506;OCCURENCE=1(stomach)	0.319	NA	13.1229384
348	5	52201722	52201722	C	T	exonic	ITGA1	NA	nonsynonymous SNV	ITGA1:NM_181501:exon12:c.C1439T:p.T480M	exonic	ENSG00000213949	NA	nonsynonymous SNV	ENSG00000213949:ENST00000282588:exon12:c.C1439T:p.T480M	Score=391;Name=lod=52	NA	5q11.2	NA	NA	NA	NA	rs4145748	0.1	0.1	0.082	0.0960463	0.0596	0.1488	0.2695	0.0189	0.0603	0.06	0.16	0.2	0.02	0.09	0.2	0.1	T	0.941	P	0.587	P	0.000	D	0.002	P	1.79	L	2.7	T	-1.085	T	0.000	T	0.165	3.285	17.03	5.77	2.890	1.784	15.830	3.28452	3.28452	0.01	0.062907	0.031094	ID=COSM149831;OCCURENCE=1(stomach)	0.08	NA	13.1208264
348	16	57756643	57756643	C	T	exonic	CCDC135	NA	nonsynonymous SNV	CCDC135:NM_032269:exon10:c.C1298T:p.P433L	exonic	ENSG00000159625	NA	nonsynonymous SNV	ENSG00000159625:ENST00000336825:exon9:c.C1103T:p.P368L,ENSG00000159625:ENST00000394337:exon10:c.C1298T:p.P433L,ENSG00000159625:ENST00000360716:exon11:c.C1298T:p.P433L	Score=441;Name=lod=83	NA	16q21	NA	NA	NA	NA	rs3809611	0.2	0.2	0.205	0.210663	0.2465	0.1548	0.1441	0.2322	0.2495	0.25	0.15	0.16	0.2	0.231	0.25	0.09	T	0.826	P	0.201	B	0.000	D	0.000	P	2.92	M	3.22	T	-0.974	T	0.000	T	0.422	3.162	16.58	5.12	2.384	3.831	17.142	3.162039	3.162039	0	0.235116	0.220655	NA	0.145	NA	13.1207174
348	1	159854251	159854251	T	C	exonic	CCDC19	NA	nonsynonymous SNV	CCDC19:NM_012337:exon7:c.A872G:p.E291G	exonic	ENSG00000213085	NA	nonsynonymous SNV	ENSG00000213085:ENST00000368099:exon7:c.A872G:p.E291G,ENSG00000213085:ENST00000426543:exon7:c.A617G:p.E206G	Score=304;Name=lod=23	NA	1q23.2	NA	NA	NA	NA	rs16842789	0.11	0.11	0.106	0.104433	0.0666	0.0556	0.0591	0.2284	0.0583	0.07	0.09	0.06	0.24	0.0774	0.24	.	.	0.892	P	0.657	P	0.017	N	0.007	P	2.275	M	2.73	T	-1.116	T	0.041	T	0.107	2.907	15.69	5.09	2.032	6.500	13.108	2.906712	2.906712	0	0.070465	0.195869	NA	0.159	NA	13.1188684
348	5	52214581	52214581	G	A	exonic	ITGA1	NA	nonsynonymous SNV	ITGA1:NM_181501:exon16:c.G2008A:p.V670I	exonic	ENSG00000213949	NA	nonsynonymous SNV	ENSG00000213949:ENST00000282588:exon16:c.G2008A:p.V670I	Score=594;Name=lod=346	NA	5q11.2	NA	NA	NA	NA	rs2279587	0.1	0.1	0.083	0.0976438	0.0616	0.1548	0.2709	0.0182	0.0603	0.06	0.16	0.19	0.02	0.0909	0.19	0.46	T	0.722	P	0.576	P	0.000	D	0.019	P	1.21	L	1.12	T	-1.086	T	0.000	T	0.095	2.817	15.38	5.51	2.738	1.855	13.053	2.817003	2.817003	0.22	0.063503	0.032002	ID=COSM149832;OCCURENCE=1(stomach)	0.08	NA	13.1173304
349	21	43281767	43281767	C	A	exonic	PRDM15	NA	nonsynonymous SNV	PRDM15:NM_022115:exon7:c.G796T:p.V266L	exonic	ENSG00000141956	NA	nonsynonymous SNV	ENSG00000141956:ENST00000269844:exon7:c.G796T:p.V266L,ENSG00000141956:ENST00000433067:exon7:c.G796T:p.V266L	NA	NA	21q22.3	NA	Name=BATF	Name=5	NA	rs62621406	0.04	0.04	0.024	0.0467252	0.0626	0.005	0.0476	0.0083	0.1247	0.07	0.0017	0.06	0.01	0.0701	0.088	0.02	D	0.0	B	0.0	B	.	.	1.000	N	0	N	2.96	T	-0.980	T	0.001	T	0.023	-0.043	3.797	-4.84	-3.390	-3.706	2.647	-0.042558	NA	0	0.087674	0.01566	NA	0.065	NA	13.1129594
349	8	144994888	144994888	G	A	exonic	PLEC	NA	nonsynonymous SNV	PLEC:NM_201378:exon32:c.C9059T:p.A3020V,PLEC:NM_201379:exon32:c.C9035T:p.A3012V,PLEC:NM_201380:exon32:c.C9512T:p.A3171V,PLEC:NM_201381:exon32:c.C9005T:p.A3002V,PLEC:NM_201382:exon32:c.C9101T:p.A3034V,PLEC:NM_201383:exon32:c.C9113T:p.A3038V,PLEC:NM_201384:exon32:c.C9101T:p.A3034V,PLEC:NM_000445:exon33:c.C9182T:p.A3061V	exonic	ENSG00000178209	NA	nonsynonymous SNV	ENSG00000178209:ENST00000322810:exon32:c.C9512T:p.A3171V,ENSG00000178209:ENST00000345136:exon32:c.C9101T:p.A3034V,ENSG00000178209:ENST00000354589:exon32:c.C9101T:p.A3034V,ENSG00000178209:ENST00000354958:exon32:c.C9035T:p.A3012V,ENSG00000178209:ENST00000356346:exon32:c.C9059T:p.A3020V,ENSG00000178209:ENST00000357649:exon32:c.C9113T:p.A3038V,ENSG00000178209:ENST00000398774:exon32:c.C9005T:p.A3002V,ENSG00000178209:ENST00000527096:exon32:c.C9170T:p.A3057V,ENSG00000178209:ENST00000436759:exon33:c.C9182T:p.A3061V	NA	NA	8q24.3	Score=784;Name=V$HEN1_01	NA	NA	NA	rs35858667	0.04	0.04	0.039	0.0275559	0.0905	NA	0.0519	0.003	0.0072	0.08	0.0035	0.06	0.01	0.0568	0.08	0.01	D	0.072	B	0.04	B	0.025	U	1.000	N	0.69	N	-0.68	T	-0.989	T	0.015	T	0.154	-0.123	3.399	2.84	1.849	3.149	12.553	-0.122623	NA	0.02	0.073086	0.014068	NA	0.029	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000078904.3;CLNDSDB=.;CLNDSDBID=.	13.1129474
349	1	118482149	118482149	C	T	exonic	WDR3	NA	nonsynonymous SNV	WDR3:NM_006784:exon6:c.C629T:p.A210V	exonic	ENSG00000065183	NA	nonsynonymous SNV	ENSG00000065183:ENST00000349139:exon6:c.C629T:p.A210V	NA	NA	1p12	NA	NA	NA	NA	rs34973445	0.04	0.04	0.033	0.0247604	0.0855	NA	0.0403	0.0038	0.0051	0.08	NA	0.06	0.01	0.0554	0.081	0.01	D	0.015	B	0.051	B	0.005	N	1.000	D	2.785	M	0.14	T	-0.692	T	0.184	T	0.148	3.27	16.97	5.0	2.476	5.589	15.762	3.270047	3.270047	0.09	0.080698	0.01566	NA	0.043	NA	13.1117354
349	5	38955796	38955796	G	A	exonic	RICTOR	NA	nonsynonymous SNV	RICTOR:NM_152756:exon26:c.C2510T:p.S837F	exonic	ENSG00000164327	NA	nonsynonymous SNV	ENSG00000164327:ENST00000296782:exon26:c.C2510T:p.S837F,ENSG00000164327:ENST00000357387:exon26:c.C2510T:p.S837F	Score=675;Name=lod=735	Name=Obesity-related traits	5p13.1	NA	NA	NA	NA	rs2043112	0.39	0.39	0.398	0.363818	0.4284	0.4494	0.3631	0.2648	0.3436	0.43	0.49	0.36	0.25	0.3933	0.49	0	D	0.207	B	0.074	B	0.000	D	0.433	P	0	N	0.93	T	-0.951	T	0.000	T	0.216	0.53	6.873	4.77	1.258	4.186	7.101	0.530458	NA	0.08	0.401047	0.285293	NA	0.413	NA	13.1105864
349	9	107456892	107456892	C	G	exonic	OR13D1	NA	nonsynonymous SNV	OR13D1:NM_001004484:exon1:c.C190G:p.L64V	exonic	ENSG00000179055	NA	nonsynonymous SNV	ENSG00000179055:ENST00000318763:exon1:c.C190G:p.L64V	Score=289;Name=lod=20	NA	9q31.1	Score=796;Name=V$BACH1_01	NA	NA	NA	rs13294411	0.04	0.04	0.034	0.0533147	0.0686	0.002	0.0533	0.0068	0.1534	0.07	0.0017	0.06	0.01	0.0734	0.086	0.02	D	0.946	P	0.486	P	0.000	D	0.983	N	3.36	M	4.57	T	-1.036	T	0.001	T	0.138	2.253	13.49	1.74	0.730	-0.206	6.769	2.253189	2.253189	0.04	0.086279	0.015207	NA	0.043	NA	13.1050544
350	7	73097720	73097720	G	C	exonic	DNAJC30	NA	nonsynonymous SNV	DNAJC30:NM_032317:exon1:c.C34G:p.L12V	exonic	ENSG00000176410	NA	nonsynonymous SNV	ENSG00000176410:ENST00000395176:exon1:c.C34G:p.L12V	NA	NA	7q11.23	Score=774;Name=V$PAX5_01	Name=TBP,USF-1,Pol2-4H8,YY1,FOXA1_(C-20),CHD2_(N-1250),GTF2F1_(RAP-74),NF-YB,Max,YY1_(C-20),SP1,Pol2,NF-YA	Name=13	NA	rs28494095	0.09	0.09	0.107	0.0958466	0.0785	0.0198	0.1239	0.171	0.0706	0.08	0.02	0.12	0.15	0.0835	0.15	0.21	T	0.002	B	0.005	B	0.199	N	1.000	P	0.695	N	0.28	T	-1.119	T	0.001	T	0.049	2.136	13.1	-9.05	-2.087	-1.088	3.705	2.135786	2.135786	0.25	0.070933	0.152265	NA	0.065	NA	13.1004004
350	2	128477084	128477084	G	C	exonic	WDR33	NA	nonsynonymous SNV	WDR33:NM_018383:exon16:c.C2515G:p.P839A	exonic	ENSG00000136709	NA	nonsynonymous SNV	ENSG00000136709:ENST00000322313:exon16:c.C2515G:p.P839A	Score=533;Name=lod=196	NA	2q14.3	NA	NA	NA	NA	rs61730415	0.05	0.05	0.055	0.0571086	0.0716	0.0427	0.049	0.0582	0.0613	0.07	0.02	0.04	0.06	0.0754	0.088	0.59	T	0.056	B	0.012	B	0.000	D	0.000	P	0.345	N	-2.45	D	-0.732	T	0.034	T	0.174	3.168	16.6	4.5	1.377	5.164	15.503	3.167656	3.167656	0.01	0.087579	0.065138	NA	0.065	NA	13.0987544
351	1	26527951	26527951	G	A	exonic	CATSPER4	NA	nonsynonymous SNV	CATSPER4:NM_198137:exon9:c.G1306A:p.D436N	exonic	ENSG00000188782	NA	nonsynonymous SNV	ENSG00000188782:ENST00000338855:exon9:c.G1306A:p.D436N,ENSG00000188782:ENST00000456354:exon9:c.G1306A:p.D436N	NA	NA	1p36.11	NA	Name=GABP,TAL1_(SC-12984),E2F4,SP2_(SC-643),JunD,E2F6_(H-50),eGFP-JunD,E2F6,c-Jun,CTCF_(SC-5916),NF-YB,Max,CCNT2,c-Myc,CEBPB,CHD2_(N-1250),USF-1,CTCF	Name=91	NA	rs6657616	0.21	0.21	0.209	0.210264	0.2654	0.0218	0.1657	0.3744	0.1575	0.28	0.02	0.19	0.36	0.2235	0.36	0.12	T	0.779	P	0.251	B	0.029	N	1.000	P	1.355	L	-4.36	D	-1.190	T	0.000	T	0.08	3.634	18.48	3.1	2.393	1.622	5.74	3.633953	3.633953	NA	0.257674	0.342714	NA	0.217	NA	13.0867594
352	7	150490376	150490376	C	T	exonic	TMEM176B	NA	nonsynonymous SNV	TMEM176B:NM_001101314:exon4:c.G289A:p.A97T,TMEM176B:NM_001101311:exon5:c.G400A:p.A134T,TMEM176B:NM_001101312:exon5:c.G400A:p.A134T,TMEM176B:NM_014020:exon5:c.G400A:p.A134T	exonic	ENSG00000106565	NA	nonsynonymous SNV	ENSG00000106565:ENST00000429904:exon4:c.G400A:p.A134T,ENSG00000106565:ENST00000450753:exon4:c.G289A:p.A97T,ENSG00000106565:ENST00000326442:exon5:c.G400A:p.A134T,ENSG00000106565:ENST00000434545:exon5:c.G400A:p.A134T,ENSG00000106565:ENST00000447204:exon5:c.G400A:p.A134T,ENSG00000106565:ENST00000492607:exon6:c.G400A:p.A134T	Score=300;Name=lod=22	NA	7q36.1	NA	NA	NA	NA	rs2072443	0.4	0.4	0.401	0.407548	0.4155	0.5278	0.3357	0.2935	0.4806	0.41	0.55	0.34	0.27	0.4188	0.55	0.04	D	0.999	D	0.985	D	0.705	N	0.644	P	2.17	M	4.23	T	-0.902	T	0.000	T	0.237	1.955	12.5	2.33	2.139	0.396	4.849	1.955452	1.955452	0.02	0.417442	0.311847	NA	0.297	NA	13.0815914
352	15	81598269	81598269	T	G	exonic	IL16	NA	nonsynonymous SNV	IL16:NM_004513:exon5:c.T1338G:p.N446K,IL16:NM_172217:exon16:c.T3441G:p.N1147K,IL16:NM_001172128:exon17:c.T3441G:p.N1147K	exonic	ENSG00000172349	NA	nonsynonymous SNV	ENSG00000172349:ENST00000394652:exon5:c.T1338G:p.N446K,ENSG00000172349:ENST00000302987:exon16:c.T3441G:p.N1147K,ENSG00000172349:ENST00000394660:exon17:c.T3441G:p.N1147K,ENSG00000172349:ENST00000559388:exon19:c.T3303G:p.N1101K	NA	NA	15q25.1	Score=860;Name=V$YY1_01	NA	NA	NA	rs11556218	0.15	0.15	0.153	0.146366	0.0746	0.1647	0.1614	0.2398	0.0644	0.07	0.19	0.14	0.24	0.0969	0.24	0.07	T	1.0	D	0.997	D	0.003	N	0.010	P	0.48	N	1.65	T	-1.076	T	0.000	T	0.122	0.96	8.917	-6.3	-1.160	-1.379	11.181	0.96014	NA	0.01	0.083605	0.200182	NA	0.21	NA	13.0782284
353	3	179322385	179322385	A	C	exonic	MRPL47	NA	nonsynonymous SNV	MRPL47:NM_020409:exon1:c.T28G:p.C10G	exonic	ENSG00000136522	NA	nonsynonymous SNV	ENSG00000136522:ENST00000259038:exon1:c.T28G:p.C10G,ENSG00000136522:ENST00000476781:exon1:c.T28G:p.C10G	NA	NA	3q26.33	NA	Name=ELK4,POU2F2,GABP,TAF1,Pol2(b),MafK_(SC-477),Sin3Ak-20,YY1_(C-20),TAF7_(SQ-8),Pol2-4H8,eGFP-JunD,Pol2,SP1,TCF4,YY1,MafK_(ab50322),Oct-2,ELF1_(SC-631),NFKB,ZEB1_(SC-25388),HEY1,TBP,GTF2F1_(RAP-74),IRF1,THAP1_(SC-98174),GTF2B	Name=148	NA	rs2339844	0.1	0.1	0.095	0.120807	0.0795	0.1002	0.1455	0.1044	0.1892	0.08	0.1	0.14	0.12	0.1018	0.23	0.15	T	0.005	B	0.004	B	0.000	D	0.000	P	1.5	L	1.26	T	-1.095	T	0.001	T	0.252	1.992	12.62	5.12	2.276	2.637	11.489	1.991639	1.991639	0.04	0.078488	0.092374	NA	0.167	NA	13.0735454
353	10	129906427	129906427	C	A	exonic	MKI67	NA	nonsynonymous SNV	MKI67:NM_001145966:exon12:c.G2597T:p.G866V,MKI67:NM_002417:exon13:c.G3677T:p.G1226V	exonic	ENSG00000148773	NA	nonsynonymous SNV	ENSG00000148773:ENST00000368653:exon12:c.G2597T:p.G866V,ENSG00000148773:ENST00000368654:exon13:c.G3677T:p.G1226V	NA	NA	10q26.2	NA	NA	NA	NA	rs41306015	0.04	0.04	0.037	0.0397364	0.0944	NA	0.0648	0.0008	0.0593	0.09	0.0017	0.06	0.0041	0.0698	0.099	0.21	T	1.0	D	1.0	D	0.331	N	0.999	P	2.165	M	4.0	T	-1.050	T	0.001	T	0.366	2.499	14.32	3.33	1.875	1.029	13.353	2.499339	2.499339	0.03	0.098488	0.019065	NA	0.051	NA	13.0706454
354	11	73020846	73020846	G	T	exonic	ARHGEF17	NA	nonsynonymous SNV	ARHGEF17:NM_014786:exon1:c.G1163T:p.R388L	exonic	ENSG00000110237	NA	nonsynonymous SNV	ENSG00000110237:ENST00000263674:exon1:c.G1163T:p.R388L	Score=336;Name=lod=31	NA	11q13.4	Score=823;Name=V$OLF1_01	NA	NA	NA	rs3741151	0.05	0.05	0.036	0.0489217	0.0924	0.0099	0.0403	0.0295	0.0767	0.1	0.01	0.02	0.02	0.0829	0.1	0	D	0.001	B	0.001	B	0.106	N	1.000	P	0.895	L	-0.55	T	-0.880	T	0.009	T	0.113	2.802	15.33	3.1	2.244	2.467	12.005	2.802497	2.802497	0.01	0.095673	0.036106	NA	0.08	NA	13.0623604
354	12	49691250	49691250	A	G	exonic	PRPH	NA	synonymous SNV	PRPH:NM_006262:exon6:c.A1107G:p.K369K	exonic	ENSG00000135406	NA	synonymous SNV	ENSG00000135406:ENST00000257860:exon6:c.A1107G:p.K369K	Score=675;Name=lod=739	NA	12q13.12	Score=772;Name=V$HTF_01	Name=CTCFL_(SC-98982),YY1_(C-20),SMC3_(ab9263),Pol2,CTCF,Pol2-4H8,ZNF263,CTCF_(SC-5916),c-Myc	Name=42	NA	rs73112143	0.2	0.2	0.197	0.205272	0.2048	0.0367	0.1484	0.3979	0.1595	0.21	0.05	0.17	0.38	0.2012	0.38	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.964	T	0.000	T	.	3.596	18.31	3.65	0.690	4.851	9.756	3.596407	3.596407	NA	0.200279	0.351566	NA	0.246	CLINSIG=untested;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000057157.1;CLNDSDB=.;CLNDSDBID=.	13.0603876
354	10	102016044	102016044	C	T	exonic	CWF19L1	NA	nonsynonymous SNV	CWF19L1:NM_018294:exon5:c.G479A:p.C160Y	exonic	ENSG00000095485	NA	nonsynonymous SNV	ENSG00000095485:ENST00000354105:exon5:c.G479A:p.C160Y	Score=558;Name=lod=248	NA	10q24.31	Score=860;Name=V$HMX1_01	NA	NA	NA	rs2270962	0.22	0.22	0.215	0.250998	0.0775	0.1419	0.1311	0.5998	0.1554	0.09	0.15	0.13	0.56	0.1306	0.56	0.25	T	0.0	B	0.0	B	0.000	N	0.000	P	-0.895	N	1.67	T	-0.961	T	0.000	T	0.114	1.678	11.57	4.85	1.152	1.883	9.637	1.677721	1.677721	0.16	0.066163	0.515207	ID=COSM147028;OCCURENCE=1(stomach)	0.181	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116858.2;CLNDSDB=.;CLNDSDBID=.	13.0590704
354	16	72156842	72156842	T	G	exonic	PMFBP1	NA	nonsynonymous SNV	PMFBP1:NM_031293:exon19:c.A2739C:p.K913N,PMFBP1:NM_001160213:exon20:c.A2304C:p.K768N	exonic	ENSG00000118557	NA	nonsynonymous SNV	ENSG00000118557:ENST00000537792:exon3:c.A237C:p.K79N,ENSG00000118557:ENST00000237353:exon19:c.A2739C:p.K913N,ENSG00000118557:ENST00000355636:exon19:c.A2304C:p.K768N,ENSG00000118557:ENST00000537465:exon19:c.A2754C:p.K918N	Score=525;Name=lod=182	NA	16q22.2	NA	NA	NA	NA	rs16973716	0.43	0.43	0.435	0.481629	0.4105	0.3413	0.3112	0.6263	0.6247	0.42	0.35	0.35	0.59	0.442	0.59	0.06	T	0.999	D	0.996	D	0.000	D	0.447	P	2.08	M	2.3	T	-0.886	T	0.000	T	0.13	3.456	17.71	3.78	0.893	1.490	7.127	3.45639	3.45639	0.03	0.422209	0.55232	NA	0.536	NA	13.0586244
354	7	11509561	11509561	G	C	exonic	THSD7A	NA	nonsynonymous SNV	THSD7A:NM_015204:exon9:c.C2313G:p.D771E	exonic	ENSG00000005108	NA	nonsynonymous SNV	ENSG00000005108:ENST00000423059:exon9:c.C2313G:p.D771E	Score=508;Name=lod=155	NA	7p21.3	NA	NA	NA	NA	rs2285744	0.27	0.27	0.275	0.278754	0.4125	0.2252	0.2435	0.1195	0.4366	0.4	0.22	0.28	0.14	0.4303	0.43	0.38	T	1.0	D	0.999	D	0.000	D	0.000	P	3.13	M	2.08	T	-0.927	T	0.000	T	0.411	4.157	21.5	3.74	0.801	2.051	8.898	4.156823	4.156823	0	0.432825	0.158281	NA	0.384	NA	13.0577084
354	17	648186	648186	G	A	exonic	GEMIN4	NA	nonsynonymous SNV	GEMIN4:NM_015721:exon2:c.C3097T:p.R1033C	exonic	ENSG00000179409	NA	nonsynonymous SNV	ENSG00000179409:ENST00000576778:exon1:c.C3064T:p.R1022C,ENSG00000179409:ENST00000319004:exon2:c.C3097T:p.R1033C	Score=516;Name=lod=166	NA	17p13.3	NA	NA	NA	NA	rs7813	0.69	0.69	0.726	0.707069	0.5905	0.7232	0.6398	0.8782	0.6268	0.59	0.71	0.61	0.87	0.6245	0.87	0.01	D	0.995	D	0.528	P	0.000	D	0.000	P	1.61	L	3.24	T	-1.158	T	0.000	T	0.431	3.373	17.37	5.71	2.709	7.130	18.856	3.372854	3.372854	0.01	0.562831	0.835938	NA	0.63	NA	13.0555024
355	11	67202156	67202156	C	T	exonic	RPS6KB2	NA	nonsynonymous SNV	RPS6KB2:NM_003952:exon14:c.C1259T:p.A420V	exonic	ENSG00000175634	NA	nonsynonymous SNV	ENSG00000175634:ENST00000312629:exon14:c.C1259T:p.A420V	Score=441;Name=lod=83	NA	11q13.2	NA	Name=Pol2-4H8,Oct-2,POU2F2,Pol2	Name=6	NA	rs13859	0.5	0.5	0.503	0.486821	0.4225	0.3264	0.5692	0.8079	0.226	0.44	0.32	0.54	0.77	0.4291	0.77	0.08	T	0.003	B	0.009	B	0.000	D	0.000	P	0	N	-0.32	T	-0.963	T	0.000	T	0.067	2.597	14.64	4.45	2.300	6.850	15.058	2.596768	2.596768	0.01	0.42784	0.734837	ID=COSM1475816,COSM429715;OCCURENCE=1(breast)	0.58	NA	13.0538934
355	19	18285944	18285944	G	A	exonic	IFI30	NA	nonsynonymous SNV	IFI30:NM_006332:exon2:c.G227A:p.R76Q	exonic	ENSG00000216490	NA	nonsynonymous SNV	ENSG00000216490:ENST00000407280:exon2:c.G227A:p.R76Q,ENSG00000216490:ENST00000597802:exon3:c.G227A:p.R76Q	Score=333;Name=lod=30	NA	19p13.11	NA	NA	Name=2	NA	rs11554159	0.19	0.19	0.213	0.181709	0.2704	0.0655	0.1816	0.2398	0.1319	0.27	0.07	0.2	0.22	0.2554	0.27	0.15	T	0.997	D	0.757	P	.	.	0.000	P	1.525	L	.	.	-1.089	T	0.000	T	0.364	3.402	17.49	4.22	1.230	5.701	12.498	3.402221	3.402221	0.07	0.25648	0.219128	NA	0.225	NA	13.0510534
355	9	32634467	32634467	T	C	exonic	TAF1L	NA	nonsynonymous SNV	TAF1L:NM_153809:exon1:c.A1111G:p.M371V	exonic	ENSG00000122728	NA	nonsynonymous SNV	ENSG00000122728:ENST00000242310:exon1:c.A1111G:p.M371V	Score=719;Name=lod=1119	NA	9p21.1	NA	NA	NA	NA	rs17219559	0.05	0.05	0.054	0.0397364	0.1113	0.001	0.0951	0.0038	0.0153	0.11	0.0017	0.09	0.01	0.071	0.11	0.01	D	0.896	P	0.54	P	0.000	D	0.000	P	2.485	M	0.71	T	-1.020	T	0.004	T	0.198	2.446	14.14	1.04	0.426	5.066	5.860	2.445506	2.445506	NA	0.102442	0.015887	NA	0.058	NA	13.0485914
356	16	70170222	70170222	G	T	exonic	PDPR	NA	nonsynonymous SNV	PDPR:NM_017990:exon10:c.G1123T:p.V375L	exonic	ENSG00000090857	NA	nonsynonymous SNV	ENSG00000090857:ENST00000398122:exon8:c.G823T:p.V275L,ENSG00000090857:ENST00000565186:exon8:c.G1123T:p.V375L,ENSG00000090857:ENST00000288050:exon10:c.G1123T:p.V375L,ENSG00000090857:ENST00000568530:exon10:c.G1123T:p.V375L	NA	NA	16q22.1	NA	NA	NA	NA	rs59034887	0.14	0.14	0.118	NA	NA	NA	NA	NA	NA	0.15	0.09	0.12	0.18	0.1536	0.18	0.81	T	0.004	B	0.015	B	0.000	D	1.000	D	0.365	N	-1.96	D	-1.101	T	0.001	T	0.133	2.031	12.75	4.42	1.985	7.777	11.983	2.030632	2.030632	0.15	0.136211	0.152108	ID=COSM148099;OCCURENCE=1(stomach)	0.087	NA	13.0435224
356	6	42891022	42891022	G	A	exonic	PTCRA	NA	nonsynonymous SNV	PTCRA:NM_001243168:exon2:c.G316A:p.V106I,PTCRA:NM_138296:exon2:c.G316A:p.V106I,PTCRA:NM_001243169:exon3:c.G241A:p.V81I	exonic	ENSG00000171611	NA	nonsynonymous SNV	ENSG00000171611:ENST00000304672:exon2:c.G316A:p.V106I,ENSG00000171611:ENST00000441198:exon3:c.G241A:p.V81I	Score=358;Name=lod=38	NA	6p21.1	NA	NA	NA	NA	rs9471966	0.23	0.23	0.257	0.240415	0.2893	0.0238	0.2133	0.3994	0.2178	0.28	0.03	0.23	0.41	0.2383	0.41	0.07	T	0.995	D	0.894	P	0.001	D	0.000	P	1.1	L	0.58	T	-0.864	T	0.141	T	0.104	4.363	23	4.82	2.668	3.635	9.602	4.362653	4.362653	0.1	0.264884	0.345438	NA	0.254	NA	13.0408494
356	5	80600619	80600619	C	G	exonic	ZCCHC9	NA	nonsynonymous SNV	ZCCHC9:NM_001131035:exon2:c.C43G:p.P15A,ZCCHC9:NM_001131036:exon2:c.C43G:p.P15A,ZCCHC9:NM_032280:exon2:c.C43G:p.P15A	exonic	ENSG00000131732	NA	nonsynonymous SNV	ENSG00000131732:ENST00000254037:exon1:c.C43G:p.P15A,ENSG00000131732:ENST00000380199:exon2:c.C43G:p.P15A,ENSG00000131732:ENST00000407610:exon2:c.C43G:p.P15A,ENSG00000131732:ENST00000438268:exon2:c.C43G:p.P15A	Score=304;Name=lod=23	NA	5q14.1	NA	NA	NA	NA	rs16878594	0.06	0.06	0.058	0.0654952	0.1123	0.0069	0.0692	0.0605	0.0818	0.1	0.0035	0.08	0.05	0.0824	0.1	0.93	T	0.002	B	0.002	B	0.000	D	0.941	D	0.235	N	0.97	T	-1.102	T	0.002	T	0.051	0.755	7.999	4.59	2.559	2.765	12.468	0.754886	NA	0.89	0.100465	0.064458	NA	0.101	NA	13.0381684
356	5	125887715	125887715	T	G	exonic	ALDH7A1	NA	nonsynonymous SNV	ALDH7A1:NM_001202404:exon12:c.A1204C:p.K402Q,ALDH7A1:NM_001182:exon14:c.A1315C:p.K439Q,ALDH7A1:NM_001201377:exon14:c.A1231C:p.K411Q	exonic	ENSG00000164904	NA	nonsynonymous SNV	ENSG00000164904:ENST00000447989:exon12:c.A1204C:p.K402Q,ENSG00000164904:ENST00000553117:exon12:c.A1123C:p.K375Q,ENSG00000164904:ENST00000409134:exon14:c.A1315C:p.K439Q	Score=556;Name=lod=242	NA	5q23.2	Score=750;Name=V$STAT5A_02	NA	NA	NA	rs12514417	0.1	0.1	0.077	0.096845	0.1014	0.1667	0.1571	0.0219	0.0787	0.09	0.15	0.13	0.02	0.1059	0.15	0.24	T	0.019	B	0.026	B	0.000	N	0.000	P	1.475	L	-2.85	D	-0.814	T	0.008	T	0.24	1.974	12.56	3.52	0.900	4.745	11.714	1.974123	1.974123	0.24	0.088721	0.044485	NA	0.058	CLINSIG=probable-non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000116310.2|RCV000123625.1;CLNDSDB=.|.;CLNDSDBID=.|.	13.0373124
357	2	225362478	225362478	C	T	exonic	CUL3	NA	nonsynonymous SNV	CUL3:NM_001257197:exon11:c.G1501A:p.V501I,CUL3:NM_001257198:exon12:c.G1717A:p.V573I,CUL3:NM_003590:exon12:c.G1699A:p.V567I	exonic	ENSG00000036257	NA	nonsynonymous SNV	ENSG00000036257:ENST00000344951:exon11:c.G1501A:p.V501I,ENSG00000036257:ENST00000264414:exon12:c.G1699A:p.V567I,ENSG00000036257:ENST00000409096:exon12:c.G1627A:p.V543I,ENSG00000036257:ENST00000409777:exon12:c.G1627A:p.V543I	Score=645;Name=lod=558	NA	2q36.2	Score=848;Name=V$NKX61_01	NA	NA	NA	rs3738952	0.13	0.13	0.104	0.139377	0.0845	0.2391	0.1859	0.0129	0.2311	0.08	0.24	0.17	0.02	0.128	0.24	0.16	T	0.0	B	0.014	B	0.000	D	0.000	P	-0.345	N	-0.76	T	-1.111	T	0.000	T	0.174	3.015	16.06	6.16	2.937	2.648	20.860	3.015369	3.015369	0.19	0.094302	0.026101	NA	0.123	NA	13.0265314
358	5	96363459	96363459	A	G	exonic	LNPEP	NA	nonsynonymous SNV	LNPEP:NM_005575:exon17:c.A2887G:p.I963V,LNPEP:NM_175920:exon17:c.A2845G:p.I949V	exonic	ENSG00000113441	NA	nonsynonymous SNV	ENSG00000113441:ENST00000231368:exon17:c.A2887G:p.I963V,ENSG00000113441:ENST00000395770:exon17:c.A2845G:p.I949V	Score=485;Name=lod=125	NA	5q15	NA	NA	NA	NA	rs11746232	0.06	0.06	0.057	0.0706869	0.1262	0.003	0.0692	0.0265	0.1442	0.12	0.01	0.07	0.02	0.0938	0.12	0.04	D	0.006	B	0.038	B	0.000	D	0.000	P	1.67	L	3.54	T	-1.050	T	0.000	T	0.098	3.007	16.03	5.83	2.229	4.550	15.846	3.007313	3.007313	0.01	0.096047	0.032229	NA	0.181	NA	13.0172864
359	14	64908845	64908845	G	A	exonic	MTHFD1	NA	nonsynonymous SNV	MTHFD1:NM_005956:exon20:c.G1958A:p.R653Q	exonic	ENSG00000100714	NA	nonsynonymous SNV	ENSG00000100714:ENST00000216605:exon20:c.G2126A:p.R709Q,ENSG00000100714:ENST00000545908:exon20:c.G2126A:p.R709Q,ENSG00000100714:ENST00000555709:exon20:c.G1958A:p.R653Q	Score=456;Name=lod=95	NA	14q23.3	Score=869;Name=V$CHOP_01	NA	NA	NA	rs2236225	0.35	0.35	0.304	0.341853	0.4294	0.1984	0.5447	0.1581	0.5041	0.43	0.23	0.53	0.21	0.4354	0.53	0.15	T	0.33	B	0.026	B	0.000	D	0.000	P	1.02	L	1.98	T	-0.909	T	0.000	T	0.398	2.668	14.88	4.97	2.941	5.247	5.933	2.667518	2.667518	0.09	0.457442	0.214026	NA	0.428	CLINSIG=other;CLNDBN=Neural_tube_defects\x2c_folate-sensitive\x2c_susceptibility_to;CLNREVSTAT=single;CLNACC=RCV000014603.1;CLNDSDB=.;CLNDSDBID=.	13.0110914
359	1	207074905	207074905	T	C	exonic	IL24	NA	nonsynonymous SNV	IL24:NM_001185156:exon5:c.T373C:p.Y125H,IL24:NM_006850:exon5:c.T370C:p.Y124H	exonic	ENSG00000162892	NA	nonsynonymous SNV	ENSG00000162892:ENST00000294984:exon5:c.T370C:p.Y124H,ENSG00000162892:ENST00000391929:exon5:c.T373C:p.Y125H	Score=300;Name=lod=22	NA	1q32.1	NA	NA	NA	NA	rs1150258	0.36	0.36	0.353	0.315695	0.4533	0.2123	0.438	0.2905	0.228	0.45	0.23	0.5	0.3	0.3976	0.5	0.13	T	1.0	D	0.999	D	0.000	D	0.000	P	2.14	M	2.25	T	-0.915	T	0.000	T	0.225	2.461	14.19	2.38	0.322	1.076	3.697	2.460607	2.460607	NA	0.471512	0.295733	NA	0.478	NA	13.0109214
360	14	20295627	20295627	C	G	exonic	OR4N2	NA	nonsynonymous SNV	OR4N2:NM_001004723:exon1:c.C20G:p.T7R	exonic	ENSG00000176294	NA	nonsynonymous SNV	ENSG00000176294:ENST00000315947:exon1:c.C20G:p.T7R,ENSG00000176294:ENST00000568211:exon1:c.C20G:p.T7R,ENSG00000176294:ENST00000557677:exon2:c.C20G:p.T7R,ENSG00000176294:ENST00000557414:exon5:c.C20G:p.T7R	NA	NA	14q11.2	NA	NA	NA	NA	rs72663752	0.08	0.08	0.063	0.0726837	0.1093	0.1002	0.1023	0.0174	0.0603	0.11	0.09	0.1	0.01	0.1092	0.11	0.09	T	0.857	P	0.517	P	0.000	D	1.000	N	2.25	M	5.72	T	-1.147	T	0.006	T	0.431	1.467	10.85	4.41	2.431	2.603	14.877	1.467128	1.467128	0	0.114767	0.044258	NA	0.08	NA	13.0000664
360	19	2396611	2396611	C	T	exonic	TMPRSS9	NA	nonsynonymous SNV	TMPRSS9:NM_182973:exon2:c.C217T:p.R73W	exonic	ENSG00000178297	NA	nonsynonymous SNV	ENSG00000178297:ENST00000332578:exon2:c.C217T:p.R73W	Score=265;Name=lod=16	NA	19p13.3	NA	NA	NA	NA	rs17685098	0.38	0.38	0.343	0.389377	0.2286	0.504	0.4524	0.4206	0.3497	0.24	0.53	0.4	0.41	0.359	0.53	0.01	D	0.997	D	0.817	P	0.220	N	0.984	P	0.69	N	-2.36	D	-0.986	T	0.000	T	0.123	2.554	14.5	2.94	0.795	1.370	10.228	2.553839	2.553839	0	0.246279	0.38851	NA	0.355	NA	12.9994544
360	18	14537949	14537949	A	G	exonic	POTEC	NA	nonsynonymous SNV	POTEC:NM_001137671:exon3:c.T661C:p.C221R	exonic	ENSG00000183206	NA	nonsynonymous SNV	ENSG00000183206:ENST00000358970:exon3:c.T661C:p.C221R,ENSG00000183206:ENST00000511306:exon3:c.T661C:p.C221R	Score=410;Name=lod=62	NA	18p11.21	NA	NA	NA	NA	rs7505568	0.25	0.25	0.134	NA	NA	NA	NA	NA	NA	0.15	0.47	0.25	0.13	0.1981	0.47	0	D	0.996	D	0.996	D	.	.	0.000	P	2.52	M	-0.13	T	-0.991	T	0.000	T	0.495	1.905	12.33	1.4	0.898	5.428	4.972	1.905479	1.905479	NA	0.139849	0.142341	NA	NA	NA	12.9953844
360	16	70182390	70182390	T	G	exonic	PDPR	NA	nonsynonymous SNV	PDPR:NM_017990:exon17:c.T1986G:p.N662K	exonic	ENSG00000090857	NA	nonsynonymous SNV	ENSG00000090857:ENST00000567896:exon2:c.T60G:p.N20K,ENSG00000090857:ENST00000563930:exon3:c.T60G:p.N20K,ENSG00000090857:ENST00000567046:exon3:c.T60G:p.N20K,ENSG00000090857:ENST00000569042:exon3:c.T135G:p.N45K,ENSG00000090857:ENST00000542659:exon4:c.T21G:p.N7K,ENSG00000090857:ENST00000398122:exon15:c.T1686G:p.N562K,ENSG00000090857:ENST00000288050:exon17:c.T1986G:p.N662K,ENSG00000090857:ENST00000568530:exon17:c.T1986G:p.N662K	Score=528;Name=lod=187	NA	16q22.1	Score=880;Name=V$OCT_C	NA	NA	NA	rs62050978	NA	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.338	0.18	0.34	T	0.037	B	0.021	B	0.000	D	1.000	D	1.59	L	-0.31	T	-0.497	T	0.555	D	0.392	2.518	14.38	-1.15	-0.552	-1.180	11.278	2.518492	2.518492	0.07	NA	NA	NA	0.145	NA	12.9953334
361	11	123886984	123886984	A	G	exonic	OR10G4	NA	nonsynonymous SNV	OR10G4:NM_001004462:exon1:c.A703G:p.R235G	exonic	ENSG00000254737	NA	nonsynonymous SNV	ENSG00000254737:ENST00000320891:exon1:c.A703G:p.R235G	Score=378;Name=lod=46	NA	11q24.1	NA	NA	NA	NA	rs4936880	0.45	0.45	0.416	0.427316	0.4404	0.3591	0.5014	0.4682	0.3763	0.44	0.41	0.54	0.45	0.4471	0.54	0	D	0.88	P	0.843	P	0.006	N	0.908	P	2.88	M	8.63	T	-1.162	T	0.000	T	0.181	2.819	15.39	3.33	1.529	2.582	11.874	2.819021	2.819021	0	0.455571	0.476147	NA	0.37	NA	12.9902624
361	2	160310246	160310246	A	G	exonic	BAZ2B	NA	nonsynonymous SNV	BAZ2B:NM_013450:exon4:c.T212C:p.M71T	exonic	ENSG00000123636	NA	nonsynonymous SNV	ENSG00000123636:ENST00000343439:exon4:c.T212C:p.M71T,ENSG00000123636:ENST00000355831:exon4:c.T212C:p.M71T,ENSG00000123636:ENST00000392782:exon4:c.T212C:p.M71T,ENSG00000123636:ENST00000392783:exon4:c.T212C:p.M71T,ENSG00000123636:ENST00000437839:exon4:c.T212C:p.M71T	Score=755;Name=lod=1565	NA	2q24.2	Score=973;Name=V$IK2_01	NA	NA	NA	rs10202670	0.07	0.07	0.059	0.0714856	0.1153	0.0129	0.0605	0.0287	0.1524	0.12	0.01	0.08	0.04	0.1084	0.12	0	D	0.187	B	0.059	B	.	.	0.523	P	1.7	L	2.79	T	-1.082	T	0.002	T	0.333	3.276	17	5.46	2.066	8.256	14.500	3.276231	3.276231	0.03	0.121389	0.035266	NA	0.043	NA	12.9882444
361	10	115644040	115644040	G	A	exonic	NHLRC2	NA	nonsynonymous SNV	NHLRC2:NM_198514:exon5:c.G940A:p.V314I	exonic	ENSG00000196865	NA	nonsynonymous SNV	ENSG00000196865:ENST00000369301:exon5:c.G940A:p.V314I	Score=407;Name=lod=60	NA	10q25.3	NA	NA	NA	NA	rs7913176	0.24	0.24	0.206	0.223442	0.2932	0.3125	0.2291	0.121	0.1943	0.29	0.31	0.2	0.12	0.272	0.31	0.79	T	0.552	P	0.064	B	0.000	D	0.059	P	1.085	L	-2.59	D	-0.986	T	0.000	T	0.064	2.338	13.78	5.03	2.345	2.574	16.589	2.338147	2.338147	0.43	0.281628	0.155243	ID=COSM427091;OCCURENCE=1(breast)	0.188	NA	12.9865054
362	14	74876355	74876355	G	C	exonic	SYNDIG1L	NA	nonsynonymous SNV	SYNDIG1L:NM_001105579:exon2:c.C93G:p.S31R	exonic	ENSG00000183379	NA	nonsynonymous SNV	ENSG00000183379:ENST00000554823:exon1:c.C93G:p.S31R,ENSG00000183379:ENST00000331628:exon2:c.C93G:p.S31R,ENSG00000183379:ENST00000554953:exon2:c.C93G:p.S31R	Score=437;Name=lod=80	NA	14q24.3	NA	NA	NA	NA	rs61734850	0.13	0.13	0.104	0.104034	0.1203	0.0813	0.1945	0.0983	0.0542	0.13	0.1	0.17	0.12	0.1179	0.17	0.01	D	0.232	B	0.147	B	0.009	N	0.732	P	0.55	N	-3.69	D	-0.726	T	0.007	T	0.072	1.117	9.554	3.46	2.298	1.104	9.878	1.116787	NA	0.03	0.111071	0.102372	NA	0.167	NA	12.9840624
362	11	17118687	17118687	T	C	exonic	PIK3C2A	NA	nonsynonymous SNV	PIK3C2A:NM_002645:exon26:c.A4243G:p.T1415A	exonic	ENSG00000011405	NA	nonsynonymous SNV	ENSG00000011405:ENST00000265970:exon26:c.A4243G:p.T1415A,ENSG00000011405:ENST00000540361:exon26:c.A3103G:p.T1035A	Score=646;Name=lod=563	NA	11p15.1	NA	NA	NA	NA	rs11604561	0.08	0.08	0.074	0.0802716	0.1243	0.0109	0.1081	0.0968	0.0644	0.12	0.01	0.13	0.09	0.1002	0.13	0.24	T	0.018	B	0.012	B	0.000	D	0.000	P	2.175	M	0.37	T	-0.997	T	0.003	T	0.242	2.95	15.83	4.96	2.326	4.121	11.685	2.950077	2.950077	0.05	0.125204	0.097955	NA	0.138	NA	12.9836294
362	20	6011934	6011934	C	T	exonic	CRLS1	NA	nonsynonymous SNV	CRLS1:NM_001127458:exon4:c.C281T:p.P94L,CRLS1:NM_019095:exon4:c.C578T:p.P193L	exonic	ENSG00000088766	NA	nonsynonymous SNV	ENSG00000088766:ENST00000378863:exon4:c.C578T:p.P193L,ENSG00000088766:ENST00000378868:exon4:c.C281T:p.P94L	Score=612;Name=lod=409	NA	20p12.3	NA	NA	NA	NA	rs41282950	0.07	0.07	0.049	0.0517173	0.1292	0.0099	0.0908	0.0038	0.0521	0.13	0.01	0.1	0.002	0.0965	0.13	0.65	T	0.952	P	0.725	P	0.000	D	0.000	P	1.06	L	.	.	-1.126	T	0.003	T	0.18	3.795	19.27	5.74	2.716	6.175	17.415	3.795241	3.795241	0.14	0.125843	0.022923	NA	0.065	NA	12.9817904
362	4	17829990	17829990	G	C	exonic	NCAPG	NA	nonsynonymous SNV	NCAPG:NM_022346:exon12:c.G1743C:p.M581I	exonic	ENSG00000109805	NA	nonsynonymous SNV	ENSG00000109805:ENST00000510063:exon4:c.G438C:p.M146I,ENSG00000109805:ENST00000251496:exon12:c.G1743C:p.M581I	Score=500;Name=lod=143	NA	4p15.31	Score=815;Name=V$POU3F2_01	NA	NA	NA	rs3795243	0.1	0.1	0.086	0.141174	0.0905	0.1617	0.1167	0.0877	0.2618	0.09	0.12	0.12	0.09	0.1288	0.13	0.69	T	0.015	B	0.02	B	0.000	D	0.055	P	0.63	N	1.2	T	-1.053	T	0.001	T	0.059	-0.589	1.362	5.01	2.309	3.187	7.943	-0.588596	NA	0.41	0.132326	0.088289	NA	0.138	NA	12.9817074
362	6	32548026	32548026	G	C	exonic	HLA-DRB1	NA	nonsynonymous SNV	HLA-DRB1:NM_002124:exon5:c.C785G:p.T262R	exonic	ENSG00000196126	NA	nonsynonymous SNV	ENSG00000196126:ENST00000360004:exon5:c.C785G:p.T262R	Score=389;Name=lod=51	NA	6p21.32	NA	NA	NA	NA	rs9269744	NA	NA	0.278	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3575	0.098	0.07	T	1.0	D	0.997	D	0.231	N	1.000	D	.	.	6.11	T	-0.679	T	0.004	T	0.73	2.404	14	3.06	0.736	2.243	9.689	2.40378	2.40378	0.08	NA	NA	NA	0.101	NA	12.9758334
363	17	1704296	1704296	C	A	exonic	SMYD4	NA	nonsynonymous SNV	SMYD4:NM_052928:exon5:c.G392T:p.R131I	exonic	ENSG00000186532	NA	nonsynonymous SNV	ENSG00000186532:ENST00000305513:exon5:c.G392T:p.R131I,ENSG00000186532:ENST00000570368:exon5:c.G392T:p.R131I,ENSG00000186532:ENST00000571854:exon5:c.G392T:p.R131I	Score=313;Name=lod=25	NA	17p13.3	NA	NA	Name=5	NA	rs7224496	0.34	0.34	0.326	0.28734	0.4851	0.2688	0.2594	0.2073	0.2311	0.51	0.27	0.3	0.18	0.3875	0.51	0.21	T	0.993	D	0.961	D	0.041	N	0.000	P	2.79	M	2.19	T	-0.913	T	0.000	T	0.461	2.149	13.14	3.97	0.844	3.005	9.787	2.148721	2.148721	0.07	0.48814	0.22719	NA	0.261	NA	12.9725934
363	16	81242198	81242198	G	A	exonic	PKD1L2	NA	stopgain	PKD1L2:NM_001076780:exon4:c.C658T:p.Q220X	exonic	ENSG00000166473,ENSG00000269323	NA	stopgain	ENSG00000166473:ENST00000337114:exon4:c.C658T:p.Q220X,ENSG00000269323:ENST00000599697:exon4:c.C658T:p.Q220X	Score=459;Name=lod=98	NA	16q23.2	NA	NA	NA	NA	rs7499011	0.2	0.2	0.182	0.161741	0.3837	0.003	0.2349	0.0923	0.1391	0.37	0.0017	0.3	0.08	0.2809	0.37	0.04	D	.	.	.	.	0.000	D	0.000	P	.	.	.	.	.	.	.	.	.	5.056	30	4.31	1.957	7.373	16.402	5.056326	5.056326	0.01	0.363959	0.142008	NA	0.196	NA	12.971441
363	2	113537223	113537223	C	A	exonic	IL1A	NA	nonsynonymous SNV	IL1A:NM_000575:exon5:c.G340T:p.A114S	exonic	ENSG00000115008	NA	nonsynonymous SNV	ENSG00000115008:ENST00000263339:exon5:c.G340T:p.A114S	NA	NA	2q13	NA	Name=Pol2(b)	Name=6	NA	rs17561	0.2	0.2	0.201	0.217452	0.2873	0.0734	0.2666	0.1672	0.3272	0.3	0.08	0.25	0.17	0.2733	0.3	0.4	T	0.982	D	0.637	P	0.171	N	1.000	P	1.75	L	2.28	T	-0.912	T	0.000	T	0.064	3.462	17.73	4.44	2.761	2.817	12.884	3.461982	3.461982	0.25	0.301744	0.183386	NA	0.232	NA	12.9709894
364	17	39471778	39471778	C	T	exonic	KRTAP17-1	NA	nonsynonymous SNV	KRTAP17-1:NM_031964:exon1:c.G125A:p.G42D	exonic	ENSG00000186860	NA	nonsynonymous SNV	ENSG00000186860:ENST00000334202:exon1:c.G125A:p.G42D	Score=265;Name=lod=16	NA	17q21.2	Score=865;Name=V$SPZ1_01	NA	NA	NA	rs78413710	0.18	0.18	0.055	0.187899	0.1809	0.3165	0.1354	0.1354	0.1708	0.17	0.28	0.14	0.13	0.1916	0.28	0	D	0.015	B	0.018	B	.	.	0.999	P	0.55	N	.	.	-1.042	T	0.000	T	0.364	0.257	5.391	3.29	1.004	1.496	7.677	0.257268	NA	NA	NA	NA	NA	0.007	NA	12.9608334
364	1	205554085	205554085	G	C	exonic	MFSD4	NA	nonsynonymous SNV	MFSD4:NM_181644:exon5:c.G941C:p.G314A	exonic	ENSG00000174514	NA	nonsynonymous SNV	ENSG00000174514:ENST00000536357:exon4:c.G680C:p.G227A,ENSG00000174514:ENST00000367147:exon5:c.G941C:p.G314A,ENSG00000174514:ENST00000539267:exon5:c.G941C:p.G314A	Score=251;Name=lod=14	NA	1q32.1	Score=816;Name=V$GFI1_01	Name=CTCF,CTCF_(SC-5916)	Name=7	NA	rs7526132	0.42	0.42	0.394	0.425919	0.4503	0.0813	0.4942	0.708	0.3262	0.47	0.09	0.49	0.66	0.4449	0.66	0.52	T	0.042	B	0.035	B	0.000	N	0.997	P	0.785	N	-1.35	T	-0.945	T	0.000	T	0.064	-0.242	2.834	4.8	1.594	4.195	15.565	-0.241878	NA	1	0.479535	0.652746	NA	0.464	NA	12.9585984
365	6	31239501	31239501	G	T	exonic	HLA-C	NA	nonsynonymous SNV	HLA-C:NM_001243042:exon2:c.C218A:p.A73E,HLA-C:NM_002117:exon2:c.C218A:p.A73E	exonic	ENSG00000204525	NA	nonsynonymous SNV	ENSG00000204525:ENST00000376228:exon2:c.C218A:p.A73E,ENSG00000204525:ENST00000376237:exon2:c.C218A:p.A73E,ENSG00000204525:ENST00000383329:exon2:c.C218A:p.A73E	Score=340;Name=lod=32	NA	6p21.33	Score=980;Name=V$AP2GAMMA_01	Name=CTCF,NFKB,Pol2-4H8,RFX5_(N-494),Pol2	Name=31	NA	rs1050409	0.14	0.14	0.11	0.141973	0.1382	0.0367	0.1873	0.2436	0.0849	0.13	0.05	0.19	0.22	0.1286	0.22	0.02	D	0.054	B	0.1	B	0.749	U	0.976	P	4.815	H	5.56	T	-1.058	T	0.006	T	0.537	1.739	11.77	1.93	0.751	0.281	5.723	1.738587	1.738587	0.02	0.112629	0.18994	ID=COSM451201,COSM451202;OCCURENCE=1(breast)	0.007	NA	12.9539044
365	1	41485902	41485902	C	G	exonic	SLFNL1	NA	nonsynonymous SNV	SLFNL1:NM_144990:exon2:c.G431C:p.R144T,SLFNL1:NM_001168247:exon3:c.G431C:p.R144T	exonic	ENSG00000171790	NA	nonsynonymous SNV	ENSG00000171790:ENST00000359345:exon1:c.G431C:p.R144T,ENSG00000171790:ENST00000372613:exon1:c.G431C:p.R144T,ENSG00000171790:ENST00000302946:exon2:c.G431C:p.R144T,ENSG00000171790:ENST00000372611:exon3:c.G431C:p.R144T,ENSG00000171790:ENST00000397197:exon3:c.G431C:p.R144T,ENSG00000171790:ENST00000439569:exon3:c.G431C:p.R144T	Score=272;Name=lod=17	NA	1p34.2	Score=851;Name=V$GATA1_03	Name=Pol2-4H8	NA	NA	rs3738368	0.2	0.2	0.159	0.182109	0.3042	0.1687	0.2896	0.0166	0.2178	0.29	0.18	0.3	0.02	0.275	0.31	0.01	D	0.972	D	0.592	P	0.045	N	0.906	P	1.845	L	0.24	T	-1.062	T	0.000	T	0.19	1.197	9.864	3.77	0.746	0.322	8.589	1.197201	NA	0	0.307558	0.074671	NA	0.268	NA	12.9465754
365	19	8160897	8160897	G	C	exonic	FBN3	NA	nonsynonymous SNV	FBN3:NM_032447:exon44:c.C5607G:p.N1869K	exonic	ENSG00000142449	NA	nonsynonymous SNV	ENSG00000142449:ENST00000270509:exon44:c.C5607G:p.N1869K,ENSG00000142449:ENST00000600128:exon45:c.C5607G:p.N1869K,ENSG00000142449:ENST00000601739:exon45:c.C5607G:p.N1869K	Score=537;Name=lod=203	NA	19p13.2	NA	Name=KAP1	NA	NA	rs12150963	0.15	0.15	0.131	0.132188	0.1153	0.245	0.2594	0.0159	0.1002	0.12	0.26	0.23	0.02	0.1401	0.26	0.31	T	0.334	B	0.138	B	0.000	U	0.000	P	0.245	N	-2.88	D	-1.091	T	0.000	T	0.053	1.885	12.26	3.71	1.748	6.946	15.833	1.885399	1.885399	0.18	0.132674	0.036087	NA	0.058	NA	12.9452594
366	5	141309824	141309824	G	A	exonic	KIAA0141	NA	nonsynonymous SNV	KIAA0141:NM_001142603:exon7:c.G739A:p.A247T,KIAA0141:NM_014773:exon7:c.G739A:p.A247T	exonic	ENSG00000081791	NA	nonsynonymous SNV	ENSG00000081791:ENST00000194118:exon7:c.G739A:p.A247T,ENSG00000081791:ENST00000432126:exon7:c.G739A:p.A247T,ENSG00000081791:ENST00000508751:exon7:c.G739A:p.A247T	Score=512;Name=lod=161	NA	5q31.3	Score=820;Name=V$IRF7_01	NA	NA	NA	rs351260	0.19	0.19	0.16	0.163139	0.3062	0.1329	0.2161	0.0234	0.1984	0.3	0.13	0.25	0.04	0.2619	0.34	0.13	T	0.742	P	0.227	B	0.001	N	0.979	P	3.26	M	0.53	T	-1.067	T	0.000	T	0.292	2.258	13.51	3.97	1.243	2.644	9.366	2.258234	2.258234	0.37	0.337209	0.072628	NA	0.174	NA	12.9280244
367	1	64095111	64095111	A	G	exonic	PGM1	NA	nonsynonymous SNV	PGM1:NM_001172818:exon2:c.A316G:p.I106V,PGM1:NM_002633:exon2:c.A262G:p.I88V	exonic	ENSG00000079739	NA	nonsynonymous SNV	ENSG00000079739:ENST00000371083:exon2:c.A316G:p.I106V,ENSG00000079739:ENST00000371084:exon2:c.A262G:p.I88V	Score=407;Name=lod=60	NA	1p31.3	Score=821;Name=V$CDP_01	NA	NA	NA	rs855314	0.13	0.13	0.127	0.129792	0.1431	0.0109	0.1138	0.2519	0.0849	0.14	0.01	0.11	0.25	0.1304	0.25	1	T	0.107	B	0.059	B	0.000	D	0.000	P	-0.53	N	0.02	T	-1.049	T	0.042	T	0.251	1.673	11.55	5.48	2.210	9.210	15.892	1.672935	1.672935	1	0.14093	0.2399	NA	0.13	NA	12.9189034
367	8	87567193	87567193	C	T	exonic	CPNE3	NA	nonsynonymous SNV	CPNE3:NM_003909:exon15:c.C1235T:p.T412M	exonic	ENSG00000085719	NA	nonsynonymous SNV	ENSG00000085719:ENST00000198765:exon14:c.C1235T:p.T412M,ENSG00000085719:ENST00000521271:exon15:c.C1235T:p.T412M	Score=559;Name=lod=249	NA	8q21.3	Score=765;Name=V$PAX5_02	NA	NA	NA	rs2304789	0.22	0.22	0.207	0.212859	0.332	0.0139	0.17	0.2829	0.2311	0.32	0.02	0.19	0.32	0.2666	0.32	0.14	T	0.471	P	0.149	B	0.000	D	0.000	P	1.16	L	1.91	T	-0.930	T	0.000	T	0.392	2.55	14.49	5.66	2.814	3.088	20.111	2.550189	2.550189	0.12	0.318605	0.313209	NA	0.268	NA	12.9161284
368	1	11854476	11854476	T	G	exonic	MTHFR	NA	nonsynonymous SNV	MTHFR:NM_005957:exon8:c.A1286C:p.E429A	exonic	ENSG00000177000	NA	nonsynonymous SNV	ENSG00000177000:ENST00000376592:exon7:c.A1286C:p.E429A,ENSG00000177000:ENST00000376583:exon8:c.A1409C:p.E470A,ENSG00000177000:ENST00000376590:exon8:c.A1286C:p.E429A,ENSG00000177000:ENST00000376585:exon9:c.A1409C:p.E470A	Score=575;Name=lod=289	NA	1p36.22	NA	NA	NA	NA	rs1801131	0.23	0.23	0.224	0.249401	0.3131	0.2192	0.1513	0.1513	0.4172	0.32	0.19	0.18	0.17	0.295	0.32	0.18	T	0.462	P	0.065	B	0.000	D	0.000	P	1.375	L	-0.78	T	-1.076	T	0.000	T	0.397	2.791	15.29	4.74	1.898	3.792	13.742	2.790872	2.790872	0.12	0.31314	0.155016	NA	0.203	CLINSIG=non-pathogenic|other;CLNDBN=MTHFR_deficiency\x2c_thermolabile_type|Schizophrenia\x2c_susceptibility_to;CLNREVSTAT=single|single;CLNACC=RCV000003698.1|RCV000003699.1;CLNDSDB=MedGen|.;CLNDSDBID=C1856059|.	12.9120934
368	3	170732300	170732300	G	A	exonic	SLC2A2	NA	nonsynonymous SNV	SLC2A2:NM_000340:exon3:c.C329T:p.T110I	exonic	ENSG00000163581	NA	nonsynonymous SNV	ENSG00000163581:ENST00000314251:exon3:c.C329T:p.T110I,ENSG00000163581:ENST00000497642:exon3:c.C329T:p.T110I	Score=595;Name=lod=350	NA	3q26.2	NA	Name=CEBPB	NA	NA	rs5400	0.19	0.19	0.204	0.215256	0.1352	0.0159	0.1715	0.4894	0.1636	0.14	0.02	0.19	0.46	0.154	0.46	1	T	0.0	B	0.0	B	0.013	N	0.000	P	-2.86	N	-0.48	T	-0.948	T	0.000	T	0.029	0.881	8.575	6.08	1.126	7.036	12.113	0.880856	NA	1	0.133372	0.447118	NA	0.341	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118387.2;CLNDSDB=.;CLNDSDBID=.	12.9107614
368	1	247695427	247695427	C	G	exonic	OR2C3	NA	nonsynonymous SNV	OR2C3:NM_198074:exon2:c.G387C:p.R129S	exonic	ENSG00000196242	NA	nonsynonymous SNV	ENSG00000196242:ENST00000366487:exon2:c.G387C:p.R129S	Score=500;Name=lod=144	NA	1q44	NA	Name=CTCF,CTCF_(SC-5916)	Name=3	NA	rs34220133	0.07	0.07	0.063	0.0690895	0.1372	0.002	0.0504	0.0333	0.1299	0.14	0.0035	0.07	0.02	0.1225	0.16	0	D	0.421	B	0.086	B	0.213	U	0.000	P	1.445	L	5.03	T	-0.912	T	0.000	T	0.178	3.347	17.27	2.0	0.418	-2.208	7.899	3.347422	3.347422	0	0.16407	0.049705	NA	0.123	NA	12.9095634
369	17	29161503	29161503	A	G	exonic	ATAD5	NA	nonsynonymous SNV	ATAD5:NM_024857:exon2:c.A404G:p.E135G	exonic	ENSG00000176208	NA	nonsynonymous SNV	ENSG00000176208:ENST00000321990:exon2:c.A404G:p.E135G,ENSG00000176208:ENST00000578295:exon2:c.A404G:p.E135G	Score=336;Name=lod=31	NA	17q11.2	Score=789;Name=V$CART1_01	NA	NA	NA	rs11080134	0.17	0.17	0.14	0.151558	0.327	0.001	0.2594	0.0673	0.1636	0.33	0.0017	0.28	0.06	0.2609	0.34	0.18	T	0.977	D	0.647	P	0.007	N	0.201	P	1.735	L	2.21	T	-1.033	T	0.000	T	0.232	0.479	6.597	4.24	1.067	1.536	6.678	0.47855	NA	0	0.341131	0.109396	NA	0.246	NA	12.9043024
369	19	46998236	46998236	C	T	exonic	PNMAL2	NA	nonsynonymous SNV	PNMAL2:NM_020709:exon1:c.G487A:p.G163S	exonic	ENSG00000204850,ENSG00000204851	NA	nonsynonymous SNV	ENSG00000204850:ENST00000377652:exon1:c.C347T:p.P116L,ENSG00000204851:ENST00000377655:exon1:c.G487A:p.G163S,ENSG00000204851:ENST00000599531:exon1:c.G487A:p.G163S	NA	NA	19q13.32	Score=766;Name=V$YY1_02	NA	NA	NA	rs4803967	0.11	0.11	0.096	0.0824681	0.1551	0.0069	0.1311	0.0976	0.0307	0.16	0.01	0.16	0.1	0.1166	0.16	0.43	T	0.996	D	0.923	D	.	.	1.000	P	0.55	N	1.33	T	-1.068	T	0.001	T	0.116	3.645	18.53	2.93	1.922	1.437	9.557	3.644613	3.644613	0	0.158256	0.124376	NA	0.116	NA	12.9033774
369	11	20648364	20648364	G	C	exonic	SLC6A5	NA	nonsynonymous SNV	SLC6A5:NM_004211:exon8:c.G1371C:p.K457N	exonic	ENSG00000165970	NA	nonsynonymous SNV	ENSG00000165970:ENST00000525748:exon8:c.G1371C:p.K457N	Score=476;Name=lod=115	NA	11p15.1	Score=765;Name=V$BRACH_01	NA	NA	NA	rs3740870	0.09	0.09	0.076	0.0904553	0.1392	0.0744	0.0922	0.0091	0.1656	0.14	0.08	0.1	0.02	0.1339	0.16	0.71	T	0.043	B	0.03	B	0.000	D	0.000	P	0.49	N	-0.74	T	-1.089	T	0.001	T	0.235	1.659	11.51	5.12	2.873	1.250	10.623	1.659351	1.659351	0.09	0.16093	0.030413	ID=COSM1353176;OCCURENCE=1(large_intestine)	0.138	NA	12.8993034
369	16	77323235	77323235	C	G	exonic	ADAMTS18	NA	nonsynonymous SNV	ADAMTS18:NM_199355:exon22:c.G3476C:p.S1159T	exonic	ENSG00000140873	NA	nonsynonymous SNV	ENSG00000140873:ENST00000282849:exon22:c.G3476C:p.S1159T	NA	NA	16q23.1	NA	Name=GR	Name=110	NA	rs3743749	0.17	0.17	0.166	0.181909	0.1451	0.2212	0.1254	0.2103	0.181	0.13	0.18	0.15	0.22	0.1499	0.22	0.3	T	0.116	B	0.115	B	0.000	D	0.999	P	1.275	L	0.12	T	-1.078	T	0.000	T	0.098	3.928	19.99	4.82	1.443	3.104	13.782	3.928362	3.928362	0.18	0.141512	0.209964	NA	0.152	NA	12.8968214
369	15	36946303	36946303	C	G	exonic	C15orf41	NA	nonsynonymous SNV	C15orf41:NM_001130010:exon4:c.C217G:p.L73V	exonic	ENSG00000186073	NA	nonsynonymous SNV	ENSG00000186073:ENST00000564586:exon2:c.C106G:p.L36V,ENSG00000186073:ENST00000437989:exon4:c.C217G:p.L73V,ENSG00000186073:ENST00000566621:exon4:c.C217G:p.L73V,ENSG00000186073:ENST00000569302:exon4:c.C217G:p.L73V	Score=626;Name=lod=466	NA	15q14	Score=896;Name=V$AREB6_01	NA	Name=8	NA	rs3784678	0.49	0.49	0.49	0.497005	0.4423	0.6815	0.3818	0.3782	0.6053	0.47	0.66	0.38	0.42	0.5352	0.66	0.16	T	0.879	P	0.503	P	.	.	0.000	P	1.465	L	0.85	T	-0.913	T	0.000	T	0.33	2.814	15.37	5.5	2.854	3.645	12.854	2.813509	2.813509	0.1	0.459195	0.395594	NA	0.572	NA	12.8966384
370	1	186316488	186316488	C	T	exonic	TPR	NA	nonsynonymous SNV	TPR:NM_003292:exon22:c.G2879A:p.S960N	exonic	ENSG00000047410	NA	nonsynonymous SNV	ENSG00000047410:ENST00000367478:exon22:c.G2879A:p.S960N	Score=561;Name=lod=253	NA	1q31.1	NA	NA	NA	NA	rs3753565	0.1	0.1	0.106	0.0980431	0.1501	0.13	0.0634	0.0242	0.136	0.15	0.11	0.07	0.03	0.1341	0.16	0.08	T	0.956	P	0.63	P	0.000	D	0.035	P	1.7	L	1.84	T	-1.188	T	0.001	T	0.111	4.675	25.8	5.25	2.445	3.539	18.845	4.6754	4.6754	0.07	0.156129	0.043837	NA	0.094	NA	12.8930044
370	18	56203074	56203074	G	A	exonic	ALPK2	NA	nonsynonymous SNV	ALPK2:NM_052947:exon5:c.C4345T:p.P1449S	exonic	ENSG00000198796	NA	nonsynonymous SNV	ENSG00000198796:ENST00000361673:exon5:c.C4345T:p.P1449S	NA	NA	18q21.32	NA	Name=EBF1_(C-8),Oct-2,ELF1_(SC-631),BCL11A,YY1_(C-20),Pol2,POU2F2,TAF1,PAX5-C20,Pol2-4H8,Pbx3,YY1	Name=5	NA	rs3809982	0.38	0.38	0.363	0.329273	0.5308	0.2381	0.3847	0.2088	0.3395	0.54	0.24	0.45	0.23	0.4259	0.54	0.14	T	0.999	D	0.96	D	0.002	N	1.000	P	1.65	L	0.72	T	-0.984	T	0.000	T	0.193	2.866	15.55	3.37	1.415	1.301	10.886	2.865878	2.865878	0	0.484997	0.25931	NA	0.457	NA	12.8916364
371	3	16327909	16327909	C	T	exonic	OXNAD1	NA	nonsynonymous SNV	OXNAD1:NM_138381:exon5:c.C244T:p.R82C	exonic	ENSG00000154814	NA	nonsynonymous SNV	ENSG00000154814:ENST00000544043:exon4:c.C298T:p.R100C,ENSG00000154814:ENST00000285083:exon5:c.C244T:p.R82C,ENSG00000154814:ENST00000435829:exon5:c.C298T:p.R100C,ENSG00000154814:ENST00000605932:exon5:c.C244T:p.R82C,ENSG00000154814:ENST00000606098:exon5:c.C244T:p.R82C	Score=366;Name=lod=41	NA	3p25.1	NA	Name=BATF,Pol2-4H8	Name=10	NA	rs6777976	0.18	0.18	0.198	0.177316	0.162	0.1696	0.1081	0.2663	0.1299	0.16	0.19	0.11	0.27	0.1449	0.27	0.17	T	0.02	B	0.011	B	0.000	N	0.000	P	2.64	M	2.39	T	-1.044	T	0.000	T	0.41	2.186	13.27	4.38	1.204	0.332	13.880	2.185915	2.185915	0.07	0.14186	0.232183	NA	0.196	NA	12.8845734
371	2	133540605	133540605	G	T	exonic	NCKAP5	NA	nonsynonymous SNV	NCKAP5:NM_207363:exon14:c.C3779A:p.P1260Q	exonic	ENSG00000176771	NA	nonsynonymous SNV	ENSG00000176771:ENST00000317721:exon12:c.C3779A:p.P1260Q,ENSG00000176771:ENST00000409261:exon14:c.C3779A:p.P1260Q	Score=415;Name=lod=65	NA	2q21.2	NA	NA	NA	NA	rs13016342	0.12	0.12	0.123	0.121006	0.1441	0.0655	0.1225	0.1702	0.0869	0.13	0.06	0.15	0.16	0.1393	0.17	0.21	T	0.996	D	0.931	D	0.042	U	0.000	P	0.975	L	2.4	T	-1.056	T	0.000	T	0.074	3.458	17.72	4.61	1.500	6.500	14.048	3.458367	3.458367	0.06	0.165428	0.174273	NA	0.196	NA	12.8845054
371	10	61552692	61552692	G	T	exonic	CCDC6	NA	nonsynonymous SNV	CCDC6:NM_005436:exon9:c.C1408A:p.P470T	exonic	ENSG00000108091	NA	nonsynonymous SNV	ENSG00000108091:ENST00000263102:exon9:c.C1408A:p.P470T	Score=574;Name=lod=287	NA	10q21.2	NA	NA	NA	NA	rs1053266	0.46	0.46	0.402	0.435304	0.4503	0.6121	0.598	0.1989	0.4417	0.47	0.57	0.58	0.22	0.502	0.58	0.02	D	0.998	D	0.987	D	0.030	N	0.000	P	1.39	L	0.54	T	-0.870	T	0.000	T	0.262	3.312	17.13	5.6	2.786	8.852	19.985	3.311702	3.311702	0	0.503372	0.264185	ID=COSM146940;OCCURENCE=1(stomach)	0.42	NA	12.8776614
371	12	117383320	117383320	G	A	exonic	FBXW8	NA	nonsynonymous SNV	FBXW8:NM_012174:exon3:c.G377A:p.R126Q,FBXW8:NM_153348:exon3:c.G575A:p.R192Q	exonic	ENSG00000174989	NA	nonsynonymous SNV	ENSG00000174989:ENST00000309909:exon3:c.G575A:p.R192Q,ENSG00000174989:ENST00000455858:exon3:c.G377A:p.R126Q	Score=503;Name=lod=148	NA	12q24.22	NA	NA	NA	NA	rs4076700	0.68	0.68	0.642	0.641773	0.8201	0.7302	0.8429	0.2315	0.7791	0.83	0.75	0.83	0.27	0.7886	0.85	0.17	T	1.0	D	0.977	D	0.000	D	0.005	P	1.935	M	1.82	T	-1.116	T	0.000	T	0.58	4.031	20.7	5.19	1.585	4.602	13.006	4.031213	4.031213	0.14	0.847558	0.313436	NA	0.638	NA	12.8770754
372	15	90170237	90170237	C	T	exonic	TICRR	NA	nonsynonymous SNV	TICRR:NM_152259:exon22:c.C5653T:p.R1885C	exonic	ENSG00000140534	NA	nonsynonymous SNV	ENSG00000140534:ENST00000268138:exon22:c.C5653T:p.R1885C,ENSG00000140534:ENST00000560985:exon22:c.C5650T:p.R1884C	Score=363;Name=lod=40	NA	15q26.1	NA	NA	NA	NA	rs3743372	0.26	0.26	0.267	0.267372	0.33	0.3958	0.2839	0.0514	0.3507	0.34	0.35	0.25	0.06	0.302	0.35	0.03	D	0.998	D	0.804	P	0.391	N	0.000	P	1.87	L	3.02	T	-0.904	T	0.000	T	0.343	2.882	15.6	3.49	1.328	0.993	8.464	2.881889	2.881889	0.05	0.334147	0.086364	NA	0.254	NA	12.8671864
372	8	2046700	2046700	C	T	exonic	MYOM2	NA	nonsynonymous SNV	MYOM2:NM_003970:exon19:c.C2327T:p.T776M	exonic	ENSG00000036448	NA	nonsynonymous SNV	ENSG00000036448:ENST00000523438:exon6:c.C602T:p.T201M,ENSG00000036448:ENST00000262113:exon19:c.C2327T:p.T776M	Score=321;Name=lod=27	NA	8p23.3	NA	NA	NA	NA	rs2294066	0.19	0.19	0.169	0.165935	0.166	0.2629	0.1945	0.1195	0.1084	0.16	0.27	0.23	0.1	0.1563	0.27	0.04	D	0.999	D	0.967	D	0.002	N	0.666	P	2.32	M	0.32	T	-1.115	T	0.000	T	0.275	1.457	10.81	3.72	0.700	0.029	11.114	1.456847	1.456847	0.07	0.144186	0.125965	NA	0.174	NA	12.8668474
373	19	44156472	44156472	T	C	exonic	PLAUR	NA	nonsynonymous SNV	PLAUR:NM_001005377:exon5:c.A524G:p.K175R,PLAUR:NM_001005376:exon6:c.A659G:p.K220R,PLAUR:NM_002659:exon6:c.A659G:p.K220R	exonic	ENSG00000011422	NA	nonsynonymous SNV	ENSG00000011422:ENST00000221264:exon5:c.A524G:p.K175R,ENSG00000011422:ENST00000339082:exon6:c.A659G:p.K220R,ENSG00000011422:ENST00000340093:exon6:c.A659G:p.K220R,ENSG00000011422:ENST00000599892:exon6:c.A584G:p.K195R	Score=426;Name=lod=72	NA	19q13.31	NA	Name=eGFP-JunD,HEY1,YY1	Name=142	NA	rs2302524	0.17	0.17	0.142	0.165136	0.1412	0.0833	0.2666	0.208	0.1442	0.14	0.08	0.24	0.25	0.1629	0.25	0.06	T	0.158	B	0.062	B	0.851	N	0.585	P	0.55	N	-0.43	T	-1.104	T	0.000	T	0.104	2.931	15.77	4.49	2.014	3.565	10.344	2.930532	2.930532	0.03	0.166512	0.197458	ID=COSM148659;OCCURENCE=1(stomach)	0.21	NA	12.8627214
373	17	42987523	42987523	G	A	exonic	GFAP	NA	nonsynonymous SNV	GFAP:NM_001131019:exon8:c.C1277T:p.T426M	exonic	ENSG00000131095	NA	nonsynonymous SNV	ENSG00000131095:ENST00000586125:exon2:c.C128T:p.T43M,ENSG00000131095:ENST00000435360:exon8:c.C1277T:p.T426M	Score=374;Name=lod=44	NA	17q21.31	NA	NA	NA	NA	rs9908084	0.08	0.08	0.115	0.105631	0.167	0.005	0.1081	0.1021	0.1493	0.13	0.0035	0.13	0.07	0.1375	0.17	0.01	D	0.007	B	0.001	B	.	.	0.000	P	0	N	-1.89	D	-0.989	T	0.001	T	0.064	2.267	13.54	3.8	1.599	1.941	9.513	2.267411	2.267411	0	0.166946	0.095344	NA	NA	NA	12.8618874
373	18	34324091	34324091	G	A	exonic	FHOD3	NA	nonsynonymous SNV	FHOD3:NM_025135:exon20:c.G3451A:p.V1151I	exonic	ENSG00000134775	NA	nonsynonymous SNV	ENSG00000134775:ENST00000592128:exon5:c.G388A:p.V130I,ENSG00000134775:ENST00000591635:exon12:c.G1039A:p.V347I,ENSG00000134775:ENST00000359247:exon19:c.G3400A:p.V1134I,ENSG00000134775:ENST00000445677:exon19:c.G3337A:p.V1113I,ENSG00000134775:ENST00000257209:exon20:c.G3451A:p.V1151I,ENSG00000134775:ENST00000590592:exon23:c.G3976A:p.V1326I	Score=579;Name=lod=302	NA	18q12.2	NA	NA	NA	NA	rs2303510	0.33	0.33	0.335	0.376198	0.3042	0.3204	0.389	0.41	0.453	0.29	0.33	0.36	0.38	0.3415	0.46	0.18	T	0.976	D	0.622	P	0.000	D	0.000	P	0.73	N	2.36	T	-0.803	T	0.000	T	0.107	4.066	20.9	5.29	2.451	7.884	17.505	4.06619	4.06619	0.18	0.326279	0.412392	NA	0.391	NA	12.8613544
374	6	166579270	166579270	C	T	exonic	T	NA	nonsynonymous SNV	T:NM_001270484:exon4:c.G530A:p.G177D,T:NM_003181:exon4:c.G530A:p.G177D	exonic	ENSG00000164458	NA	nonsynonymous SNV	ENSG00000164458:ENST00000366876:exon3:c.G530A:p.G177D,ENSG00000164458:ENST00000296946:exon4:c.G530A:p.G177D,ENSG00000164458:ENST00000366871:exon4:c.G530A:p.G177D,ENSG00000164458:ENST00000461348:exon4:c.G530A:p.G177D	Score=278;Name=lod=18	NA	6q27	Score=839;Name=V$PAX4_01	NA	Name=3	NA	rs2305089	0.39	0.39	0.352	0.391773	0.495	0.3423	0.5288	0.2042	0.4928	0.47	0.32	0.53	0.24	0.4745	0.53	0.8	T	0.168	B	0.201	B	0.000	D	0.000	P	1.145	L	-1.31	T	-0.824	T	0.210	T	0.342	1.171	9.764	4.06	1.059	5.496	14.432	1.170949	NA	0.02	0.512442	0.264185	NA	0.486	NA	12.8513914
374	5	129040056	129040056	A	T	exonic	ADAMTS19	NA	nonsynonymous SNV	ADAMTS19:NM_133638:exon21:c.A3266T:p.Y1089F	exonic	ENSG00000145808	NA	nonsynonymous SNV	ENSG00000145808:ENST00000274487:exon21:c.A3266T:p.Y1089F	Score=528;Name=lod=186	NA	5q23.3	Score=835;Name=V$PAX3_01	NA	NA	NA	rs11749126	0.08	0.08	0.087	0.0708866	0.163	0.002	0.1009	0.0083	0.1104	0.16	NA	0.12	0.02	0.1357	0.18	.	.	0.058	B	0.022	B	0.000	D	0.000	P	0.985	L	0.19	T	-1.088	T	0.000	T	0.289	2.357	13.84	4.29	2.166	4.259	14.489	2.356939	2.356939	0.29	0.18407	0.039946	NA	0.029	NA	12.8505634
374	1	186273994	186273994	C	T	exonic	PRG4	NA	nonsynonymous SNV	PRG4:NM_001127708:exon5:c.C415T:p.R139W,PRG4:NM_005807:exon6:c.C538T:p.R180W	exonic	ENSG00000116690	NA	nonsynonymous SNV	ENSG00000116690:ENST00000533951:exon4:c.C265T:p.R89W,ENSG00000116690:ENST00000367483:exon5:c.C415T:p.R139W,ENSG00000116690:ENST00000367484:exon5:c.C415T:p.R139W,ENSG00000116690:ENST00000445192:exon6:c.C538T:p.R180W	Score=646;Name=lod=561	NA	1q31.1	NA	NA	NA	NA	rs2273779	0.25	0.25	0.223	0.231629	0.33	0.129	0.4063	0.149	0.2239	0.35	0.13	0.4	0.13	0.305	0.4	0.03	D	0.97	D	0.529	P	0.033	U	0.000	P	0.55	N	2.96	T	-0.947	T	0.000	T	0.382	3.678	18.69	4.26	1.188	1.402	9.740	3.677565	3.677565	0	0.352524	0.186903	NA	0.21	NA	12.8458094
375	11	193865	193865	T	G	exonic	LOC653486,SCGB1C1	NA	nonsynonymous SNV	LOC653486:NM_001097610:exon2:c.T209G:p.I70R,SCGB1C1:NM_145651:exon2:c.T209G:p.I70R	exonic	ENSG00000188076	NA	nonsynonymous SNV	ENSG00000188076:ENST00000342878:exon2:c.T209G:p.I70R	Score=399;Name=lod=56	NA	11p15.5	NA	NA	NA	NA	rs2686894	0.5	0.5	NA	0.493011	0.4901	0.4812	0.4942	0.4992	0.499	0.5	0.5	0.49	0.5	0.5	0.5	0.03	D	0.96	D	0.776	P	0.002	N	1.000	D	.	.	2.48	T	-0.833	T	0.000	T	0.703	2.385	13.94	3.96	0.885	2.284	8.159	2.3855	2.3855	0.11	NA	NA	NA	NA	NA	12.8432334
375	7	44444122	44444122	G	A	exonic	NUDCD3	NA	nonsynonymous SNV	NUDCD3:NM_015332:exon4:c.C703T:p.R235C	exonic	ENSG00000015676	NA	nonsynonymous SNV	ENSG00000015676:ENST00000355451:exon4:c.C703T:p.R235C	Score=358;Name=lod=38	NA	7p13	NA	NA	NA	NA	rs11550029	0.08	0.08	0.059	0.0716853	0.165	0.005	0.0807	0.0174	0.1115	0.16	0.01	0.1	0.01	0.1418	0.19	0.05	D	0.041	B	0.125	B	0.001	D	0.000	P	1.32	L	2.5	T	-1.009	T	0.000	T	0.247	3.493	17.86	5.39	2.519	5.089	18.752	3.492703	3.492703	0.05	0.186279	0.044939	ID=COSM453111;OCCURENCE=1(breast)	0.051	NA	12.8402544
376	17	21203893	21203893	T	C	exonic	MAP2K3	NA	nonsynonymous SNV	MAP2K3:NM_002756:exon4:c.T115C:p.S39P,MAP2K3:NM_145109:exon4:c.T202C:p.S68P	exonic	ENSG00000034152	NA	nonsynonymous SNV	ENSG00000034152:ENST00000342679:exon4:c.T202C:p.S68P,ENSG00000034152:ENST00000361818:exon4:c.T115C:p.S39P,ENSG00000034152:ENST00000496046:exon4:c.T202C:p.S68P,ENSG00000034152:ENST00000526076:exon4:c.T115C:p.S39P,ENSG00000034152:ENST00000316920:exon5:c.T115C:p.S39P	NA	NA	17p11.2	Score=864;Name=V$YY1_01	NA	NA	NA	rs34105301	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.4995	0.5	0.05	D	0.266	B	0.056	B	0.001	N	1.000	N	2.555	M	1.02	T	-1.097	T	0.000	T	0.715	1.507	10.99	5.47	2.087	1.894	11.148	1.50703	1.50703	0.09	NA	NA	NA	0.42	NA	12.8338334
376	11	48346962	48346962	A	G	exonic	OR4C3	NA	nonsynonymous SNV	OR4C3:NM_001004702:exon1:c.A470G:p.N157S	exonic	ENSG00000176547	NA	nonsynonymous SNV	ENSG00000176547:ENST00000319856:exon1:c.A470G:p.N157S	Score=557;Name=lod=244	NA	11p11.2	Score=861;Name=V$MRF2_01	NA	NA	NA	rs74589050	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4999	NA	0	D	0.0	B	0.0	B	0.006	N	0.849	N	0.345	N	2.15	T	-1.067	T	0.036	T	0.194	2.055	12.83	5.78	2.245	9.088	14.203	2.055245	2.055245	0	NA	NA	NA	NA	NA	12.8334334
376	11	48346791	48346791	C	T	exonic	OR4C3	NA	nonsynonymous SNV	OR4C3:NM_001004702:exon1:c.C299T:p.S100F	exonic	ENSG00000176547	NA	nonsynonymous SNV	ENSG00000176547:ENST00000319856:exon1:c.C299T:p.S100F	NA	NA	11p11.2	NA	NA	NA	NA	rs73463994	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	0	D	0.007	B	0.044	B	0.000	D	0.994	N	2.325	M	4.02	T	-1.000	T	0.000	T	0.762	1.821	12.05	5.88	2.829	2.146	17.887	1.820639	1.820639	0	NA	NA	NA	0.239	NA	12.8333334
376	11	57947223	57947223	C	A	exonic	OR9Q1	NA	nonsynonymous SNV	OR9Q1:NM_001005212:exon3:c.C307A:p.L103M	exonic	ENSG00000186509	NA	nonsynonymous SNV	ENSG00000186509:ENST00000335397:exon3:c.C307A:p.L103M	Score=378;Name=lod=46	NA	11q12.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.01	D	0.552	P	0.12	B	0.218	N	0.840	N	1.815	L	7.54	T	-0.971	T	0.001	T	0.214	2.148	13.14	2.91	1.436	0.205	1.371	2.147802	2.147802	0.04	NA	NA	NA	NA	NA	12.8333334
376	17	21202237	21202237	G	C	exonic	MAP2K3	NA	nonsynonymous SNV	MAP2K3:NM_002756:exon3:c.G77C:p.R26T,MAP2K3:NM_145109:exon3:c.G164C:p.R55T	exonic	ENSG00000034152	NA	nonsynonymous SNV	ENSG00000034152:ENST00000342679:exon3:c.G164C:p.R55T,ENSG00000034152:ENST00000361818:exon3:c.G77C:p.R26T,ENSG00000034152:ENST00000496046:exon3:c.G164C:p.R55T,ENSG00000034152:ENST00000526076:exon3:c.G77C:p.R26T,ENSG00000034152:ENST00000316920:exon4:c.G77C:p.R26T	Score=573;Name=lod=283	NA	17p11.2	NA	NA	NA	NA	rs36047035	0.5	0.5	0.44	0.000199681	0.001	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	0.1	T	0.087	B	0.03	B	0.000	D	0.970	D	0.625	N	1.08	T	-0.968	T	0.000	T	0.387	2.755	15.17	3.5	1.261	4.728	4.543	2.754779	2.754779	0.03	NA	NA	NA	0.478	NA	12.8323334
376	22	50898827	50898827	G	A	exonic	SBF1	NA	nonsynonymous SNV	SBF1:NM_002972:exon25:c.C3157T:p.R1053W	exonic	ENSG00000100241	NA	nonsynonymous SNV	ENSG00000100241:ENST00000348911:exon25:c.C3160T:p.R1054W,ENSG00000100241:ENST00000380817:exon25:c.C3157T:p.R1053W,ENSG00000100241:ENST00000390679:exon25:c.C3157T:p.R1053W	Score=591;Name=lod=336	NA	22q13.33	NA	NA	NA	NA	rs202156491	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0007	0.0009	0	D	0.998	D	0.9	P	0.004	N	0.961	D	0.895	L	2.85	T	-1.134	T	0.041	T	0.521	3.261	16.94	1.58	0.251	2.910	11.43	3.261272	3.261272	0	0.000936	0	NA	NA	NA	12.8316974
376	10	47000079	47000079	T	C	exonic	GPRIN2	NA	nonsynonymous SNV	GPRIN2:NM_014696:exon3:c.T1199C:p.L400P	exonic	ENSG00000204175	NA	nonsynonymous SNV	ENSG00000204175:ENST00000374314:exon1:c.T1199C:p.L400P,ENSG00000204175:ENST00000374317:exon3:c.T1199C:p.L400P	Score=387;Name=lod=50	NA	10q11.22	NA	Name=CTCF	NA	NA	rs3127823	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5017	0.5	1	T	0.0	B	0.0	B	0.001	N	0.992	D	-2.295	N	2.17	T	-0.855	T	0.000	T	0.21	-0.61	1.282	4.65	1.108	2.609	11.112	-0.610062	NA	1	NA	NA	NA	0.5	NA	12.8316334
376	1	235324219	235324219	G	A	exonic	RBM34	NA	nonsynonymous SNV	RBM34:NM_001161533:exon2:c.C217T:p.P73S,RBM34:NM_015014:exon2:c.C217T:p.P73S	exonic	ENSG00000188739	NA	nonsynonymous SNV	ENSG00000188739:ENST00000366606:exon2:c.C202T:p.P68S,ENSG00000188739:ENST00000408888:exon2:c.C217T:p.P73S,ENSG00000188739:ENST00000429912:exon2:c.C217T:p.P73S,ENSG00000188739:ENST00000447801:exon2:c.C211T:p.P71S	NA	NA	1q42.3	NA	Name=CHD2_(N-1250),Pol2,Sin3Ak-20	Name=115	NA	rs181926176	0.0009	0.0009	NA	0.00179712	0.001	NA	0.0086	0.0015	NA	NA	NA	0.01	NA	0.0004	0.01	0.38	T	0.64	P	0.146	B	0.001	N	0.988	D	2.255	M	2.08	T	-1.084	T	0.030	T	0.148	3.302	17.1	0.896	0.273	1.087	6.016	3.301935	3.301935	0.02	0.000364	0.000779	NA	NA	NA	12.8315694
376	10	1230968	1230968	C	T	exonic	ADARB2	NA	nonsynonymous SNV	ADARB2:NM_018702:exon9:c.G1876A:p.A626T	exonic	ENSG00000185736	NA	nonsynonymous SNV	ENSG00000185736:ENST00000381310:exon2:c.G403A:p.A135T,ENSG00000185736:ENST00000381305:exon3:c.G82A:p.A28T,ENSG00000185736:ENST00000381312:exon9:c.G1876A:p.A626T	Score=278;Name=lod=18	NA	10p15.3	Score=893;Name=V$BACH2_01	NA	NA	NA	rs2271275	0.56	0.56	0.544	0.543131	0.6809	0.6696	0.5115	0.2504	0.6892	0.68	0.65	0.56	0.24	0.6403	0.68	0.22	T	0.623	P	0.376	B	0.000	D	0.000	P	1.68	L	-3.3	D	-0.926	T	0.000	T	0.383	2.281	13.59	4.81	2.220	1.502	17.899	2.28143	2.28143	0.05	0.68241	0.322742	ID=COSM1560925;OCCURENCE=1(large_intestine)	0.449	NA	12.8297234
376	22	46932032	46932032	T	A	exonic	CELSR1	NA	nonsynonymous SNV	CELSR1:NM_014246:exon1:c.A1036T:p.T346S	exonic	ENSG00000075275	NA	nonsynonymous SNV	ENSG00000075275:ENST00000262738:exon1:c.A1036T:p.T346S,ENSG00000075275:ENST00000395964:exon1:c.A1036T:p.T346S	Score=498;Name=lod=141	NA	22q13.31	NA	NA	NA	NA	rs142090496	0.0014	0.0014	0.001	0.000798722	0.002	NA	0.0014	NA	0.001	0.0026	NA	0.0028	NA	0.0011	0.0028	0.06	T	0.972	D	0.694	P	0.000	U	0.868	N	1.785	L	4.66	T	-1.100	T	0.013	T	0.512	3.017	16.06	4.21	1.553	4.777	12.956	3.016895	3.016895	0.12	0.002674	0.000454	NA	NA	NA	12.8275594
376	4	37591783	37591783	G	A	exonic	C4orf19	NA	nonsynonymous SNV	C4orf19:NM_018302:exon3:c.G106A:p.D36N,C4orf19:NM_001104629:exon4:c.G106A:p.D36N	exonic	ENSG00000154274	NA	nonsynonymous SNV	ENSG00000154274:ENST00000284437:exon3:c.G106A:p.D36N,ENSG00000154274:ENST00000381980:exon4:c.G106A:p.D36N	Score=278;Name=lod=18	NA	4p14	NA	NA	NA	NA	rs75469859	0.0014	0.0014	NA	0.00119808	0.003	NA	0.0014	NA	0.002	0.004	NA	NA	NA	0.0014	0.004	0.08	T	0.977	D	0.787	P	0.462	N	1.000	N	1.59	L	1.49	T	-0.973	T	0.129	T	0.104	4.191	21.7	5.54	2.884	3.783	13.080	4.191373	4.191373	0.01	0.001744	0	NA	NA	NA	12.8271894
377	7	89854446	89854446	T	G	exonic	STEAP2	NA	nonsynonymous SNV	STEAP2:NM_001244945:exon2:c.T50G:p.F17C,STEAP2:NM_152999:exon2:c.T50G:p.F17C,STEAP2:NM_001040665:exon3:c.T50G:p.F17C,STEAP2:NM_001040666:exon3:c.T50G:p.F17C,STEAP2:NM_001244944:exon3:c.T50G:p.F17C,STEAP2:NM_001244946:exon3:c.T50G:p.F17C	exonic	ENSG00000157214	NA	nonsynonymous SNV	ENSG00000157214:ENST00000287908:exon2:c.T50G:p.F17C,ENSG00000157214:ENST00000394626:exon2:c.T50G:p.F17C,ENSG00000157214:ENST00000402625:exon2:c.T50G:p.F17C,ENSG00000157214:ENST00000428074:exon2:c.T50G:p.F17C,ENSG00000157214:ENST00000394621:exon3:c.T50G:p.F17C,ENSG00000157214:ENST00000394622:exon3:c.T50G:p.F17C,ENSG00000157214:ENST00000394629:exon3:c.T50G:p.F17C,ENSG00000157214:ENST00000394632:exon3:c.T50G:p.F17C,ENSG00000157214:ENST00000426158:exon3:c.T50G:p.F17C	Score=507;Name=lod=153	NA	7q21.13	NA	NA	NA	NA	rs194520	0.37	0.37	0.335	0.33726	0.5119	0.1825	0.3862	0.2859	0.3517	0.52	0.19	0.4	0.3	0.4686	0.53	0.12	T	0.999	D	0.995	D	0.000	D	0.000	P	0	N	3.4	T	-0.903	T	0.000	T	0.387	3.259	16.93	5.83	2.236	5.041	16.213	3.259318	3.259318	0.03	0.528372	0.339764	NA	0.428	NA	12.8244614
377	22	17590180	17590180	G	A	exonic	IL17RA	NA	nonsynonymous SNV	IL17RA:NM_014339:exon13:c.G2071A:p.A691T	exonic	ENSG00000177663	NA	nonsynonymous SNV	ENSG00000177663:ENST00000319363:exon13:c.G2071A:p.A691T	NA	NA	22q11.1	NA	NA	NA	NA	rs41323645	0.1	0.1	0.107	0.113818	0.1064	NA	0.0778	0.2352	0.1002	0.11	NA	0.11	0.22	0.3023	0.22	0.2	T	1.0	D	0.926	D	0.039	N	1.000	P	2.14	M	3.27	T	-1.045	T	0.000	T	0.075	3.372	17.37	3.56	2.261	1.290	7.722	3.372199	3.372199	0.59	0.100745	0.180666	NA	0.094	NA	12.8238884
377	10	15256194	15256194	G	A	exonic	FAM171A1	NA	nonsynonymous SNV	FAM171A1:NM_001010924:exon8:c.C1393T:p.P465S	exonic	ENSG00000148468	NA	nonsynonymous SNV	ENSG00000148468:ENST00000378116:exon8:c.C1393T:p.P465S	Score=423;Name=lod=70	NA	10p13	NA	NA	NA	NA	rs3814165	0.12	0.12	0.111	0.124201	0.1859	0.1448	0.1254	0.0129	0.1892	0.19	0.14	0.11	0.02	0.1497	0.19	0.41	T	0.891	P	0.596	P	0.000	D	0.000	P	1.655	L	1.53	T	-1.058	T	0.000	T	0.083	2.075	12.9	4.35	1.445	7.060	14.242	2.075108	2.075108	0.33	0.174884	0.042215	NA	0.094	NA	12.8228494
377	16	89613123	89613123	A	G	exonic	SPG7	NA	nonsynonymous SNV	SPG7:NM_003119:exon11:c.A1507G:p.T503A	exonic	ENSG00000197912	NA	nonsynonymous SNV	ENSG00000197912:ENST00000561911:exon1:c.A52G:p.T18A,ENSG00000197912:ENST00000268704:exon11:c.A1507G:p.T503A	Score=609;Name=lod=399	NA	16q24.3	NA	NA	NA	NA	rs2292954	0.12	0.12	0.102	0.10643	0.168	0.131	0.1124	0.0106	0.1431	0.17	0.13	0.12	0.02	0.1507	0.19	0.27	T	0.0	B	0.002	B	0.000	D	0.000	P	0.2	N	-3.48	D	-0.928	T	0.002	T	0.126	2.204	13.33	4.33	0.915	2.181	10.941	2.204196	2.204196	0.37	0.193721	0.038217	NA	0.094	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118409.2;CLNDSDB=.;CLNDSDBID=.	12.8209124
377	11	1605957	1605957	C	T	exonic	KRTAP5-1	NA	nonsynonymous SNV	KRTAP5-1:NM_001005922:exon1:c.G523A:p.G175R	exonic	ENSG00000205869	NA	nonsynonymous SNV	ENSG00000205869:ENST00000382171:exon1:c.G523A:p.G175R	Score=405;Name=lod=59	NA	11p15.5	NA	NA	NA	NA	rs151275365	0.01	0.01	NA	NA	NA	NA	NA	NA	NA	0.02	NA	NA	NA	0.0052	0.02	0.63	T	0.713	P	0.327	B	.	.	0.982	N	1.93	M	3.48	T	-1.036	T	0.009	T	0.142	-1.292	0.039	2.91	1.185	-1.117	5.975	-1.291524	NA	0	0.01291	0.002726	NA	NA	NA	12.8152234
378	11	124756982	124756982	G	A	exonic	ROBO4	NA	nonsynonymous SNV	ROBO4:NM_019055:exon15:c.C2326T:p.R776C	exonic	ENSG00000154133	NA	nonsynonymous SNV	ENSG00000154133:ENST00000306534:exon15:c.C2326T:p.R776C,ENSG00000154133:ENST00000533054:exon15:c.C1891T:p.R631C	Score=358;Name=lod=38	NA	11q24.2	NA	NA	NA	NA	rs138481093	0.0037	0.0037	0.005	0.00199681	0.006	0.001	0.0029	0.0008	NA	0.01	0.0017	0.0028	0.0041	0.005	0.01	0.1	T	0.986	D	0.534	P	0.303	N	0.997	N	1.78	L	0.18	T	-0.922	T	0.206	T	0.267	2.484	14.26	3.83	0.955	1.196	7.800	2.483817	2.483817	0.04	0.007444	0.002499	NA	NA	NA	12.8148894
378	6	154567863	154567863	C	T	exonic	IPCEF1,OPRM1	NA	stopgain	OPRM1:NM_001008503:exon4:c.C1201T:p.R401X	exonic	ENSG00000074706,ENSG00000112038	NA	stopgain	ENSG00000112038:ENST00000337049:exon4:c.C1201T:p.R401X	NA	NA	6q25.2	NA	Name=EBF1_(C-8),Pol2	Name=4	NA	rs34427887	0.03	0.03	0.026	0.029353	0.0636	NA	0.0476	0.0061	0.0429	0.05	NA	0.06	0.01	0.0517	0.071	0.36	T	.	.	.	.	.	.	1.000	D	.	.	.	.	.	.	.	.	.	4.341	22.8	-11.0	-3.247	-5.945	6.589	4.341008	4.341008	0.76	0.071512	0.016568	NA	0.036	NA	12.813188
378	4	154709854	154709854	G	A	exonic	SFRP2	NA	nonsynonymous SNV	SFRP2:NM_003013:exon1:c.C134T:p.A45V	exonic	ENSG00000145423	NA	nonsynonymous SNV	ENSG00000145423:ENST00000274063:exon1:c.C134T:p.A45V	Score=763;Name=lod=1676	NA	4q31.3	NA	Name=TAF7_(SQ-8)	NA	NA	rs4643790	0.16	0.16	0.143	0.149361	0.1879	0.005	0.1066	0.2784	0.1145	0.19	0.01	0.13	0.3	0.1486	0.3	0.34	T	0.013	B	0.038	B	0.000	D	0.000	P	0.72	N	-0.63	T	-1.090	T	0.000	T	0.168	2.692	14.96	4.63	2.288	5.407	17.889	2.692402	2.692402	0.12	0.183721	0.264866	NA	NA	NA	12.8131124
379	3	120976051	120976051	C	G	exonic	STXBP5L	NA	nonsynonymous SNV	STXBP5L:NM_014980:exon17:c.C1703G:p.T568S	exonic	ENSG00000145087	NA	nonsynonymous SNV	ENSG00000145087:ENST00000471262:exon16:c.C1703G:p.T568S,ENSG00000145087:ENST00000273666:exon17:c.C1703G:p.T568S,ENSG00000145087:ENST00000471454:exon17:c.C1703G:p.T568S,ENSG00000145087:ENST00000472879:exon17:c.C1703G:p.T568S,ENSG00000145087:ENST00000492541:exon17:c.C1703G:p.T568S,ENSG00000145087:ENST00000497029:exon17:c.C1703G:p.T568S	Score=651;Name=lod=592	NA	3q13.33	Score=889;Name=V$FOXJ2_02	NA	NA	NA	rs17249244	0.1	0.1	0.085	0.0898562	0.2048	0.004	0.1023	0.0908	0.0501	0.2	0.0017	0.12	0.07	0.1411	0.2	1	T	0.013	B	0.006	B	0.000	D	0.002	P	-0.62	N	1.56	T	-1.058	T	0.000	T	0.219	0.63	7.387	5.49	2.732	4.931	16.033	0.62996	NA	0.77	0.185753	0.103815	NA	0.167	NA	12.8016804
379	16	31374535	31374535	C	G	exonic	ITGAX	NA	nonsynonymous SNV	ITGAX:NM_000887:exon14:c.C1550G:p.P517R	exonic	ENSG00000140678	NA	nonsynonymous SNV	ENSG00000140678:ENST00000268296:exon14:c.C1550G:p.P517R,ENSG00000140678:ENST00000562522:exon14:c.C1550G:p.P517R	Score=420;Name=lod=68	NA	16p11.2	Score=744;Name=V$ROAZ_01	NA	NA	NA	rs2230429	0.41	0.41	0.383	0.298722	0.339	0.6766	0.3184	0.1014	0.1207	0.35	0.74	0.36	0.13	0.3313	0.74	0	D	0.996	D	0.727	P	.	.	0.900	P	1.88	L	1.35	T	-1.032	T	0.000	T	0.389	2.682	14.93	4.03	1.952	0.907	13.447	2.681501	2.681501	0.01	0.365465	0.155894	NA	0.312	NA	12.7975684
380	18	44560123	44560123	C	T	exonic	TCEB3B	NA	nonsynonymous SNV	TCEB3B:NM_016427:exon1:c.G1513A:p.G505R	exonic	ENSG00000206181	NA	nonsynonymous SNV	ENSG00000206181:ENST00000332567:exon1:c.G1513A:p.G505R	NA	NA	18q21.1	NA	NA	NA	NA	rs72921305	0.01	0.01	0.006	0.00758786	0.0209	0.006	0.0101	0.0008	0.0031	0.02	0.01	0.01	0.002	0.012	0.02	0.01	D	0.783	P	0.439	B	0.003	N	0.616	N	2.11	M	2.36	T	-1.092	T	0.026	T	0.073	2.416	14.04	2.1	1.505	2.357	7.761	2.416024	2.416024	0	0.014535	0.003858	NA	0.022	NA	12.7858984
381	11	123777412	123777412	A	G	exonic	OR8D4	NA	nonsynonymous SNV	OR8D4:NM_001005197:exon1:c.A274G:p.I92V	exonic	ENSG00000181518	NA	nonsynonymous SNV	ENSG00000181518:ENST00000321355:exon1:c.A274G:p.I92V	Score=259;Name=lod=15	NA	11q24.1	Score=908;Name=V$GATA_C	NA	NA	NA	rs17127950	0.19	0.19	0.196	0.186502	0.1829	0.0933	0.1455	0.2844	0.183	0.19	0.13	0.16	0.27	0.1772	0.27	0.01	D	0.019	B	0.033	B	0.006	N	0.921	P	2.42	M	3.42	T	-1.014	T	0.000	T	0.037	0.688	7.674	3.53	0.480	3.218	7.826	0.687645	NA	0.01	0.190161	0.245459	NA	0.196	NA	12.7830724
381	19	21606429	21606429	G	T	exonic	ZNF493	NA	nonsynonymous SNV	ZNF493:NM_175910:exon2:c.G584T:p.C195F,ZNF493:NM_001076678:exon4:c.G968T:p.C323F	exonic	ENSG00000196268	NA	nonsynonymous SNV	ENSG00000196268:ENST00000355504:exon2:c.G584T:p.C195F,ENSG00000196268:ENST00000392288:exon4:c.G968T:p.C323F	NA	NA	19p12	NA	Name=ZNF274	NA	NA	rs4621113	0.59	0.59	0.563	0.58766	0.5	0.6319	0.5476	0.6589	0.5644	0.49	0.66	0.56	0.68	0.536	0.68	0	D	1.0	D	1.0	D	.	.	0.000	P	3.495	M	-1.94	D	-0.915	T	0.000	T	0.099	0.336	5.82	0.985	0.399	6.598	8.758	0.335504	NA	0	0.516651	0.626876	NA	0.435	NA	12.7806824
381	16	58713798	58713798	G	A	exonic	SLC38A7	NA	nonsynonymous SNV	SLC38A7:NM_018231:exon3:c.C233T:p.T78I	exonic	ENSG00000103042	NA	nonsynonymous SNV	ENSG00000103042:ENST00000562397:exon2:c.C233T:p.T78I,ENSG00000103042:ENST00000564100:exon2:c.C233T:p.T78I,ENSG00000103042:ENST00000564391:exon2:c.C233T:p.T78I,ENSG00000103042:ENST00000566598:exon2:c.C233T:p.T78I,ENSG00000103042:ENST00000570101:exon2:c.C233T:p.T78I,ENSG00000103042:ENST00000219320:exon3:c.C233T:p.T78I,ENSG00000103042:ENST00000563196:exon3:c.C233T:p.T78I	Score=422;Name=lod=69	NA	16q21	Score=891;Name=V$AP2_Q6	NA	NA	NA	rs7191331	0.12	0.12	0.112	0.11262	0.1948	0.0228	0.0778	0.0998	0.1626	0.2	0.02	0.09	0.11	0.1645	0.2	.	.	0.006	B	0.014	B	0.000	D	0.000	P	0	N	4.35	T	-0.769	T	0.000	T	0.306	1.435	10.74	5.91	2.813	2.320	12.495	1.434544	1.434544	0.23	0.194302	0.116015	ID=COSM435471;OCCURENCE=1(breast)	0.072	NA	12.7797314
381	19	5455990	5455990	G	A	exonic	ZNRF4	NA	nonsynonymous SNV	ZNRF4:NM_181710:exon1:c.G488A:p.R163H	exonic	ENSG00000105428	NA	nonsynonymous SNV	ENSG00000105428:ENST00000222033:exon1:c.G488A:p.R163H	NA	NA	19p13.3	NA	NA	NA	NA	rs17304380	0.21	0.21	0.158	0.186701	0.1948	0.3671	0.1916	0.0227	0.2106	0.2	0.36	0.21	0.03	0.1944	0.36	0.03	D	1.0	D	0.984	D	0.000	U	1.000	P	4.355	H	2.71	T	-1.008	T	0.000	T	0.285	2.695	14.97	3.57	0.907	2.500	11.461	2.694842	2.694842	0.02	0.166941	0.050093	NA	0.188	NA	12.7771924
382	6	33131501	33131501	G	A	exonic	COL11A2	NA	nonsynonymous SNV	COL11A2:NM_080679:exon63:c.C4844T:p.P1615L,COL11A2:NM_080681:exon64:c.C4907T:p.P1636L,COL11A2:NM_080680:exon66:c.C5165T:p.P1722L	exonic	ENSG00000204248	NA	nonsynonymous SNV	ENSG00000204248:ENST00000361917:exon63:c.C4844T:p.P1615L,ENSG00000204248:ENST00000374708:exon64:c.C4907T:p.P1636L,ENSG00000204248:ENST00000374712:exon64:c.C4922T:p.P1641L,ENSG00000204248:ENST00000374713:exon64:c.C5024T:p.P1675L,ENSG00000204248:ENST00000357486:exon65:c.C5102T:p.P1701L,ENSG00000204248:ENST00000374714:exon65:c.C5087T:p.P1696L,ENSG00000204248:ENST00000395197:exon65:c.C4985T:p.P1662L,ENSG00000204248:ENST00000341947:exon66:c.C5165T:p.P1722L	NA	NA	6p21.32	NA	NA	NA	NA	rs2229792	0.01	0.01	0.014	0.00678914	0.0179	0.003	0.0159	NA	0.002	0.02	0.0035	0.02	0.0041	0.0193	0.025	0.05	D	0.861	P	0.163	B	0.117	N	1.000	N	0.55	N	-0.69	T	-1.037	T	0.089	T	0.326	1.424	10.7	4.06	1.288	1.031	13.065	1.424038	1.424038	0	0.025471	0.002982	NA	0.051	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000039838.1;CLNDSDB=.;CLNDSDBID=.	12.7706624
382	6	159178345	159178345	C	T	exonic	SYTL3	NA	nonsynonymous SNV	SYTL3:NM_001242395:exon12:c.C1036T:p.P346S,SYTL3:NM_001009991:exon13:c.C1036T:p.P346S,SYTL3:NM_001242394:exon14:c.C1240T:p.P414S,SYTL3:NM_001242384:exon15:c.C1240T:p.P414S	exonic	ENSG00000164674	NA	nonsynonymous SNV	ENSG00000164674:ENST00000367081:exon6:c.C418T:p.P140S,ENSG00000164674:ENST00000297239:exon13:c.C1240T:p.P414S,ENSG00000164674:ENST00000360448:exon13:c.C1036T:p.P346S	Score=374;Name=lod=44	NA	6q25.3	NA	NA	NA	NA	rs901363	0.46	0.46	0.457	0.449081	0.328	0.7361	0.598	0.2753	0.407	0.32	0.76	0.52	0.3	0.3987	0.76	0.43	T	0.853	P	0.395	B	0.000	D	0.000	P	2.28	M	3.1	T	-1.001	T	0.017	T	0.34	3.572	18.21	5.07	2.356	2.629	12.838	3.572424	3.572424	0.17	0.336395	0.281661	NA	0.428	NA	12.7702384
383	20	47273726	47273726	C	T	exonic	PREX1	NA	nonsynonymous SNV	PREX1:NM_020820:exon18:c.G1975A:p.V659M	exonic	ENSG00000124126	NA	nonsynonymous SNV	ENSG00000124126:ENST00000371941:exon18:c.G1975A:p.V659M,ENSG00000124126:ENST00000396220:exon18:c.G1975A:p.V659M	Score=405;Name=lod=59	NA	20q13.13	Score=829;Name=V$AHRARNT_01	Name=SMC3_(ab9263),CTCF	Name=19	NA	rs55904123	0.15	0.15	0.133	0.160343	0.1839	0.1587	0.2133	0.0363	0.2679	0.18	0.15	0.22	0.04	0.1971	0.22	1	T	0.0	B	0.001	B	0.000	N	0.575	P	-0.895	N	2.29	T	-0.919	T	0.000	T	0.065	-1.987	0.007	2.8	-0.281	3.541	8.526	-1.987474	NA	1	0.188023	0.077394	ID=COSM1178474,COSM1178473;OCCURENCE=1(prostate)	0.13	NA	12.7643104
383	10	47087078	47087078	G	T	exonic	NPY4R	NA	nonsynonymous SNV	NPY4R:NM_005972:exon3:c.G295T:p.A99S	exonic	ENSG00000204174	NA	nonsynonymous SNV	ENSG00000204174:ENST00000395716:exon2:c.G295T:p.A99S,ENSG00000204174:ENST00000374312:exon3:c.G295T:p.A99S	Score=525;Name=lod=182	NA	10q11.22	NA	NA	NA	NA	rs2229967	0.27	0.27	0.214	NA	NA	NA	NA	NA	NA	0.27	0.23	0.33	0.27	0.2985	0.33	0.02	D	0.687	P	0.624	P	0.015	N	1.000	N	1.46	L	1.14	T	-1.150	T	0.000	T	0.111	1.83	12.08	3.89	2.418	1.524	13.643	1.829727	1.829727	0.01	0.270814	0.2803	NA	0.203	NA	12.7640194
383	9	75315438	75315438	G	A	exonic	TMC1	NA	nonsynonymous SNV	TMC1:NM_138691:exon8:c.G241A:p.E81K	exonic	ENSG00000165091	NA	nonsynonymous SNV	ENSG00000165091:ENST00000396237:exon4:c.G241A:p.E81K,ENSG00000165091:ENST00000340019:exon7:c.G241A:p.E81K,ENSG00000165091:ENST00000297784:exon8:c.G241A:p.E81K	Score=611;Name=lod=404	NA	9q21.13	NA	NA	NA	NA	rs1796993	0.28	0.28	0.271	0.276358	0.163	0.381	0.2493	0.2708	0.3119	0.17	0.41	0.27	0.29	0.2381	0.41	0.74	T	0.155	B	0.023	B	0.000	D	0.000	P	1.28	L	0.67	T	-0.975	T	0.000	T	0.143	3.065	16.23	5.48	2.730	5.552	18.494	3.0649	3.0649	0.34	0.168645	0.262596	NA	0.174	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000041139.1;CLNDSDB=.;CLNDSDBID=.	12.7635884
383	14	24771285	24771285	G	A	exonic	NOP9	NA	nonsynonymous SNV	NOP9:NM_174913:exon4:c.G923A:p.S308N	exonic	ENSG00000196943	NA	nonsynonymous SNV	ENSG00000196943:ENST00000267425:exon4:c.G923A:p.S308N,ENSG00000196943:ENST00000396802:exon4:c.G923A:p.S308N	Score=363;Name=lod=40	NA	14q12	NA	NA	NA	NA	rs4280164	0.15	0.15	0.142	0.150359	0.1849	0.004	0.3473	0.1581	0.1155	0.2	0.01	0.3	0.15	0.183	0.3	0.5	T	0.939	P	0.639	P	0.000	D	0.129	P	1.7	L	2.54	T	-0.870	T	0.000	T	0.075	3.531	18.02	5.21	2.717	3.940	13.422	3.531149	3.531149	0.07	0.207326	0.167045	NA	0.13	NA	12.7581074
383	3	165491280	165491280	C	T	exonic	BCHE	NA	nonsynonymous SNV	BCHE:NM_000055:exon4:c.G1699A:p.A567T	exonic	ENSG00000114200	NA	nonsynonymous SNV	ENSG00000114200:ENST00000479451:exon3:c.G289A:p.A97T,ENSG00000114200:ENST00000540653:exon3:c.G85A:p.A29T,ENSG00000114200:ENST00000264381:exon4:c.G1699A:p.A567T	Score=636;Name=lod=513	Name=Cardiovascular disease risk factors,Butyrylcholinesterase levels	3q26.1	NA	NA	NA	NA	rs1803274	0.16	0.16	0.164	0.158546	0.1859	0.1339	0.1225	0.1725	0.1626	0.19	0.16	0.13	0.14	0.1891	0.25	0.07	T	0.001	B	0.012	B	0.019	N	0.933	P	1.895	L	-0.18	T	-1.017	T	0.001	T	0.246	2.97	15.9	4.14	1.206	4.872	11.972	2.969877	2.969877	0.08	0.201791	0.1896	NA	0.29	CLINSIG=other|pathogenic;CLNDBN=BCHE\x2c_K_variant|CHE*539T;CLNREVSTAT=single|single;CLNACC=RCV000014120.26|RCV000014122.16;CLNDSDB=.|.;CLNDSDBID=.|.	12.7565424
383	2	241817516	241817516	A	G	exonic	AGXT	NA	nonsynonymous SNV	AGXT:NM_000030:exon10:c.A1020G:p.I340M	exonic	ENSG00000172482	NA	nonsynonymous SNV	ENSG00000172482:ENST00000307503:exon10:c.A1020G:p.I340M	Score=304;Name=lod=23	NA	2q37.3	Score=829;Name=V$XBP1_01	NA	NA	NA	rs4426527	0.14	0.14	0.125	0.111222	0.2038	0.0883	0.1571	0.0356	0.1094	0.21	0.09	0.17	0.06	0.1653	0.21	0.81	T	0.0	B	0.001	B	0.000	N	1.000	P	-2.14	N	-2.16	D	-1.061	T	0.000	T	0.2	-2.217	0.005	2.21	0.010	2.787	8.273	-2.216946	NA	0.38	0.207907	0.064004	NA	0.116	CLINSIG=other;CLNDBN=Primary_hyperoxaluria\x2c_type_I;CLNREVSTAT=mult;CLNACC=RCV000032682.2;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet:Orphanet:SNOMED_CT;CLNDSDBID=NBK1283:C0268164:259900:ORPHA416:ORPHA93598:65520001	12.7563264
384	4	2916762	2916762	C	G	exonic	ADD1	NA	nonsynonymous SNV	ADD1:NM_001119:exon13:c.C1757G:p.S586C,ADD1:NM_014189:exon13:c.C1850G:p.S617C,ADD1:NM_014190:exon13:c.C1757G:p.S586C,ADD1:NM_176801:exon13:c.C1850G:p.S617C	exonic	ENSG00000087274	NA	nonsynonymous SNV	ENSG00000087274:ENST00000398123:exon12:c.C1850G:p.S617C,ENSG00000087274:ENST00000398129:exon12:c.C1757G:p.S586C,ENSG00000087274:ENST00000264758:exon13:c.C1850G:p.S617C,ENSG00000087274:ENST00000398125:exon13:c.C1850G:p.S617C,ENSG00000087274:ENST00000446856:exon13:c.C1757G:p.S586C,ENSG00000087274:ENST00000503455:exon13:c.C1850G:p.S617C,ENSG00000087274:ENST00000513328:exon13:c.C1757G:p.S586C,ENSG00000087274:ENST00000355842:exon15:c.C1850G:p.S617C	NA	NA	4p16.3	NA	Name=MEF2A,PAX5-N19,EBF1_(C-8)	Name=8	NA	rs4963	0.27	0.27	0.264	0.237819	0.1909	0.4524	0.1772	0.1702	0.1994	0.2	0.5	0.19	0.17	0.2136	0.5	0.14	T	0.94	P	0.694	P	0.355	N	1.000	P	1.04	L	2.16	T	-0.888	T	0.000	T	0.239	1.701	11.65	4.6	1.306	1.284	16.421	1.700709	1.700709	0.05	0.183953	0.17635	NA	0.333	NA	12.7448804
384	12	122186317	122186317	G	A	exonic	TMEM120B	NA	nonsynonymous SNV	TMEM120B:NM_001080825:exon3:c.G274A:p.D92N	exonic	ENSG00000188735	NA	nonsynonymous SNV	ENSG00000188735:ENST00000541467:exon2:c.G211A:p.D71N,ENSG00000188735:ENST00000342607:exon3:c.G274A:p.D92N,ENSG00000188735:ENST00000449592:exon3:c.G274A:p.D92N	Score=584;Name=lod=314	NA	12q24.31	NA	Name=Pol2	Name=7	NA	rs28655666	0.47	0.47	0.46	0.425919	0.5467	0.5179	0.4481	0.2103	0.4826	0.56	0.54	0.48	0.23	0.4962	0.56	0.06	T	0.007	B	0.022	B	0.000	D	0.000	P	1.59	L	1.26	T	-0.934	T	0.000	T	0.072	3.18	16.64	3.45	1.384	5.310	11.992	3.18021	3.18021	0.03	0.545584	0.255243	ID=COSM1599921,COSM1599922;OCCURENCE=1(central_nervous_system)	0.333	NA	12.7448494
384	12	25243115	25243115	G	C	exonic	LRMP	NA	nonsynonymous SNV	LRMP:NM_001204126:exon12:c.G590C:p.C197S,LRMP:NM_001204127:exon12:c.G590C:p.C197S,LRMP:NM_006152:exon13:c.G590C:p.C197S	exonic	ENSG00000118308	NA	nonsynonymous SNV	ENSG00000118308:ENST00000536173:exon9:c.G431C:p.C144S,ENSG00000118308:ENST00000547044:exon12:c.G590C:p.C197S,ENSG00000118308:ENST00000548766:exon12:c.G590C:p.C197S,ENSG00000118308:ENST00000354454:exon13:c.G590C:p.C197S,ENSG00000118308:ENST00000361433:exon13:c.G590C:p.C197S	Score=352;Name=lod=36	NA	12p12.1	NA	NA	NA	NA	rs1908946	0.53	0.53	0.505	0.499401	0.5189	0.8095	0.5231	0.1657	0.5941	0.53	0.78	0.56	0.21	0.5386	0.78	0.07	T	0.943	P	0.674	P	0.000	D	0.000	P	2.215	M	2.39	T	-0.924	T	0.000	T	0.51	4.833	27.5	5.76	2.732	5.897	17.468	4.832726	4.832726	0.09	0.53186	0.229687	NA	0.413	NA	12.7439734
385	17	40818699	40818699	A	G	exonic	TUBG2	NA	nonsynonymous SNV	TUBG2:NM_016437:exon11:c.A1237G:p.M413V	exonic	ENSG00000037042	NA	nonsynonymous SNV	ENSG00000037042:ENST00000251412:exon11:c.A1237G:p.M413V	Score=686;Name=lod=819	NA	17q21.2	NA	Name=Pol2	NA	NA	rs1046097	0.46	0.46	0.439	0.477835	0.5258	0.4643	0.4697	0.3147	0.6687	0.53	0.46	0.43	0.36	0.5287	0.56	0.66	T	0.0	B	0.0	B	0.000	D	0.155	P	1.265	L	-1.93	D	-0.986	T	0.000	T	0.097	1.499	10.96	5.07	2.132	7.164	14.989	1.498948	1.498948	0.45	0.544535	0.340445	NA	0.594	NA	12.7342984
385	3	9970121	9970121	C	T	exonic	IL17RC	NA	nonsynonymous SNV	IL17RC:NM_001203265:exon10:c.C965T:p.P322L,IL17RC:NM_032732:exon10:c.C965T:p.P322L,IL17RC:NM_001203263:exon11:c.C1010T:p.P337L,IL17RC:NM_001203264:exon11:c.C1010T:p.P337L,IL17RC:NM_153460:exon11:c.C1010T:p.P337L,IL17RC:NM_153461:exon11:c.C1223T:p.P408L	exonic	ENSG00000163702	NA	nonsynonymous SNV	ENSG00000163702:ENST00000416074:exon9:c.C578T:p.P193L,ENSG00000163702:ENST00000438091:exon9:c.C890T:p.P297L,ENSG00000163702:ENST00000383812:exon10:c.C965T:p.P322L,ENSG00000163702:ENST00000436503:exon10:c.C935T:p.P312L,ENSG00000163702:ENST00000455057:exon10:c.C965T:p.P322L,ENSG00000163702:ENST00000295981:exon11:c.C1223T:p.P408L,ENSG00000163702:ENST00000403601:exon11:c.C1010T:p.P337L,ENSG00000163702:ENST00000413608:exon11:c.C1010T:p.P337L	Score=321;Name=lod=27	NA	3p25.3	Score=874;Name=V$NF1_Q6	NA	NA	NA	rs115419420	0.02	0.02	0.025	0.0153754	0.0398	NA	0.0173	0.0174	0.002	0.05	NA	0.01	0.02	0.026	0.05	1	T	0.799	P	0.276	B	0.022	N	0.985	D	1.23	L	2.66	T	-1.004	T	0.004	T	0.487	1.099	9.485	2.73	1.222	0.855	5.503	1.099131	NA	0.31	0.037674	0.027916	ID=COSM1567088;OCCURENCE=1(large_intestine)	0.007	NA	12.7298594
385	18	43497710	43497710	A	G	exonic	EPG5	NA	nonsynonymous SNV	EPG5:NM_020964:exon17:c.T3173C:p.V1058A	exonic	ENSG00000152223	NA	nonsynonymous SNV	ENSG00000152223:ENST00000282041:exon17:c.T3173C:p.V1058A	Score=612;Name=lod=408	NA	18q12.3	NA	NA	NA	NA	rs3744998	0.49	0.49	0.463	0.426917	0.5497	0.5734	0.4222	0.2602	0.3783	0.55	0.56	0.48	0.31	0.4909	0.57	0.01	D	0.884	P	0.636	P	0.000	D	0.000	P	1.845	L	2.48	T	-0.921	T	0.000	T	0.33	3.644	18.53	5.4	2.178	6.681	15.712	3.644132	3.644132	0.01	0.56508	0.293103	NA	0.464	NA	12.7276534
386	6	31323337	31323337	T	C	exonic	HLA-B	NA	nonsynonymous SNV	HLA-B:NM_005514:exon4:c.A652G:p.I218V	exonic	ENSG00000234745	NA	nonsynonymous SNV	ENSG00000234745:ENST00000434333:exon3:c.A685G:p.I229V,ENSG00000234745:ENST00000412585:exon4:c.A652G:p.I218V	NA	NA	6p21.33	Score=833;Name=V$SREBP1_02	Name=USF-1,Pol2,Pol2-4H8	Name=4	NA	rs1050341	0.27	0.27	0.262	0.292532	0.2097	0.2034	0.2853	0.3994	0.3303	0.2	0.25	0.3	0.36	0.2329	0.36	1	T	0.0	B	0.001	B	0.060	N	1.000	P	1.19	L	2.59	T	-1.003	T	0.006	T	0.138	-0.331	2.431	-6.41	-1.842	-3.036	8.999	-0.330915	NA	0.39	0.166395	0.321153	NA	0.246	NA	12.7243384
386	11	102651313	102651313	G	C	exonic	MMP10	NA	nonsynonymous SNV	MMP10:NM_002425:exon1:c.C10G:p.L4V	exonic	ENSG00000166670	NA	nonsynonymous SNV	ENSG00000166670:ENST00000279441:exon1:c.C10G:p.L4V,ENSG00000166670:ENST00000539681:exon1:c.C10G:p.L4V	NA	NA	11q22.2	NA	Name=CTCF,Rad21,SMC3_(ab9263),CTCF_(C-20),NANOG_(SC-33759),CTCF_(SC-5916),c-Jun,JunD	Name=123	NA	rs17435959	0.08	0.08	0.075	0.0834665	0.0358	0.0486	0.0389	0.1982	0.045	0.04	0.05	0.03	0.2	0.051	0.2	0.04	D	0.914	P	0.351	B	0.019	N	1.000	P	2.85	M	2.58	T	-1.076	T	0.000	T	0.191	1.21	9.913	1.59	0.478	1.532	8.088	1.209925	NA	0.09	0.030472	0.153881	NA	0.058	NA	12.7160614
387	4	72433545	72433545	A	C	exonic	SLC4A4	NA	nonsynonymous SNV	SLC4A4:NM_001134742:exon25:c.A3220C:p.I1074L	exonic	ENSG00000080493	NA	nonsynonymous SNV	ENSG00000080493:ENST00000425175:exon25:c.A3220C:p.I1074L	Score=672;Name=lod=715	NA	4q13.3	Score=904;Name=V$OCT1_07	NA	NA	NA	rs1062677	0.16	0.16	0.144	0.171725	0.1849	0.1181	0.3487	0.0998	0.1851	0.17	0.09	0.3	0.11	0.2603	0.3	0.02	D	0.0	B	0.0	B	.	.	0.000	P	0.345	N	-1.21	T	-1.090	T	0.000	T	0.062	2.372	13.89	4.42	1.053	3.445	13.123	2.371522	2.371522	0.05	0.186659	0.126204	NA	0.152	NA	12.7014744
387	14	73989145	73989145	G	A	exonic	HEATR4	NA	nonsynonymous SNV	HEATR4:NM_203309:exon2:c.C712T:p.R238C,HEATR4:NM_001220484:exon3:c.C712T:p.R238C	exonic	ENSG00000187105	NA	nonsynonymous SNV	ENSG00000187105:ENST00000334988:exon2:c.C712T:p.R238C,ENSG00000187105:ENST00000560393:exon2:c.C571T:p.R191C,ENSG00000187105:ENST00000553558:exon3:c.C712T:p.R238C	NA	NA	14q24.3	NA	NA	NA	NA	rs78901745	0.03	0.03	0.029	0.0303514	0.0487	0.002	0.0403	0.0431	0.0164	0.04	NA	0.06	0.04	0.0385	0.06	0	D	0.995	D	0.609	P	0.364	N	1.000	N	0.895	L	0.88	T	-1.112	T	0.016	T	0.387	3.263	16.95	4.97	2.815	1.142	13.091	3.263202	3.263202	0.02	0.048488	0.040399	NA	0.029	NA	12.6976454
388	20	47859217	47859217	G	A	exonic	DDX27	NA	nonsynonymous SNV	DDX27:NM_017895:exon19:c.G2296A:p.G766S	exonic	ENSG00000124228	NA	nonsynonymous SNV	ENSG00000124228:ENST00000371764:exon19:c.G2296A:p.G766S	Score=531;Name=lod=191	NA	20q13.13	NA	NA	NA	NA	rs1130146	0.29	0.29	0.255	0.272564	0.4085	0.3234	0.3271	0.0567	0.3333	0.41	0.29	0.34	0.07	0.3498	0.41	0.37	T	0.983	D	0.748	P	0.000	D	0.000	P	1.04	L	4.89	T	-0.652	T	0.000	T	0.193	4.86	27.8	4.95	1.487	7.104	14.258	4.860053	4.860053	0.05	0.381744	0.106219	NA	0.225	NA	12.6932894
388	12	6635274	6635274	G	A	exonic	NCAPD2	NA	nonsynonymous SNV	NCAPD2:NM_014865:exon19:c.G2389A:p.V797M	exonic	ENSG00000010292	NA	nonsynonymous SNV	ENSG00000010292:ENST00000382457:exon16:c.G2005A:p.V669M,ENSG00000010292:ENST00000545962:exon18:c.G2254A:p.V752M,ENSG00000010292:ENST00000315579:exon19:c.G2389A:p.V797M	Score=505;Name=lod=150	NA	12p13.31	NA	NA	NA	NA	rs10849482	0.11	0.11	0.092	0.107827	0.2107	0.0089	0.1354	0.0242	0.1973	0.21	0.01	0.18	0.04	0.1933	0.24	0.11	T	0.947	P	0.66	P	0.000	D	0.245	P	1.74	L	0.46	T	-1.123	T	0.000	T	0.622	4.01	20.6	5.62	2.653	2.367	13.892	4.010233	4.010233	0.01	0.236047	0.056514	NA	0.087	NA	12.6932864
388	2	55436934	55436934	G	A	exonic	CLHC1	NA	nonsynonymous SNV	CLHC1:NM_001135598:exon4:c.C167T:p.A56V,CLHC1:NM_152385:exon6:c.C533T:p.A178V	exonic	ENSG00000162994	NA	nonsynonymous SNV	ENSG00000162994:ENST00000406076:exon4:c.C167T:p.A56V,ENSG00000162994:ENST00000407122:exon5:c.C533T:p.A178V,ENSG00000162994:ENST00000401408:exon6:c.C533T:p.A178V	Score=278;Name=lod=18	NA	2p16.1	NA	NA	NA	NA	rs9677948	0.21	0.21	0.226	0.210264	0.2137	0.0853	0.1715	0.3699	0.1472	0.21	0.08	0.17	0.4	0.2075	0.4	0.24	T	0.953	P	0.556	P	0.052	N	0.000	P	1.935	M	2.15	T	-0.912	T	0.000	T	0.062	3.768	19.13	3.33	1.195	2.381	5.118	3.767599	3.767599	0.06	0.219339	0.359737	NA	0.254	NA	12.6927944
388	16	78420775	78420775	G	A	exonic	WWOX	NA	nonsynonymous SNV	WWOX:NM_016373:exon6:c.G535A:p.A179T	exonic	ENSG00000186153	NA	nonsynonymous SNV	ENSG00000186153:ENST00000408984:exon6:c.G535A:p.A179T,ENSG00000186153:ENST00000566780:exon6:c.G535A:p.A179T	Score=686;Name=lod=818	NA	16q23.1	Score=779;Name=V$PAX2_01	NA	NA	NA	rs11545029	0.33	0.33	0.302	0.263379	0.6064	0.0635	0.4035	0.1067	0.229	0.6	0.08	0.42	0.13	0.4507	0.6	0.14	T	0.098	B	0.076	B	0.000	D	0.000	P	0.7	N	-2.28	D	-0.928	T	0.000	T	0.664	3.128	16.46	5.52	2.597	8.072	19.451	3.128484	3.128484	0.05	0.583474	0.195003	NA	0.232	NA	12.6927594
388	6	29910759	29910759	T	C	exonic	HLA-A	NA	nonsynonymous SNV	HLA-A:NM_001242758:exon2:c.T299C:p.V100A,HLA-A:NM_002116:exon2:c.T299C:p.V100A	exonic	ENSG00000206503	NA	nonsynonymous SNV	ENSG00000206503:ENST00000376802:exon2:c.T299C:p.V100A,ENSG00000206503:ENST00000376806:exon2:c.T299C:p.V100A,ENSG00000206503:ENST00000376809:exon2:c.T299C:p.V100A,ENSG00000206503:ENST00000396634:exon4:c.T299C:p.V100A	NA	NA	6p22.1	NA	Name=CTCF,Pol2-4H8	Name=11	NA	rs1071742	NA	NA	0.146	0.154553	0.1928	0.0704	0.1225	0.1445	0.2382	NA	NA	NA	NA	0.1853	0.27	0.18	T	0.0	B	0.004	B	0.035	N	1.000	P	2.065	M	5.69	T	-0.920	T	0.001	T	0.174	0.281	5.521	-6.67	-1.834	-2.538	0.464	0.280982	NA	0.26	0.266807	0.149499	NA	NA	NA	12.6884264
388	20	34596371	34596371	C	T	exonic	CNBD2	NA	nonsynonymous SNV	CNBD2:NM_001207076:exon9:c.C1123T:p.P375S,CNBD2:NM_080834:exon9:c.C1123T:p.P375S	exonic	ENSG00000149646	NA	nonsynonymous SNV	ENSG00000149646:ENST00000349339:exon9:c.C1123T:p.P375S,ENSG00000149646:ENST00000373973:exon9:c.C1123T:p.P375S,ENSG00000149646:ENST00000538900:exon9:c.C1123T:p.P375S	Score=265;Name=lod=16	NA	20q11.23	Score=849;Name=V$LUN1_01	NA	NA	NA	rs6060750	0.24	0.24	0.243	0.309904	0.2018	0.3135	0.1859	0.3359	0.4703	0.2	0.25	0.22	0.31	0.2429	0.31	0.34	T	0.42	B	0.09	B	0.003	N	0.175	P	2.075	M	2.75	T	-0.923	T	0.000	T	0.299	1.724	11.72	4.5	2.797	2.944	13.009	1.723698	1.723698	0.46	0.201977	0.30345	NA	0.188	NA	12.6866564
388	8	33246591	33246591	G	C	exonic	FUT10	NA	nonsynonymous SNV	FUT10:NM_032664:exon4:c.C1102G:p.L368V	exonic	ENSG00000172728	NA	nonsynonymous SNV	ENSG00000172728:ENST00000518672:exon3:c.C1018G:p.L340V,ENSG00000172728:ENST00000327671:exon4:c.C1102G:p.L368V,ENSG00000172728:ENST00000524021:exon4:c.C1018G:p.L340V,ENSG00000172728:ENST00000335589:exon5:c.C916G:p.L306V	Score=419;Name=lod=67	NA	8p12	NA	NA	NA	NA	rs17855838	0.22	0.22	0.224	0.272963	0.1938	0.4683	0.1671	0.0855	0.4816	0.18	0.44	0.15	0.07	0.2509	0.44	0.08	T	0.918	P	0.596	P	0.005	N	0.000	P	2.81	M	1.81	T	-0.902	T	0.000	T	0.225	2.799	15.32	4.09	2.493	1.797	10.244	2.799234	2.799234	0.02	0.202907	0.120291	ID=COSM150482;OCCURENCE=1(stomach)	0.203	NA	12.6857264
389	5	32786389	32786389	A	G	exonic	NPR3	NA	nonsynonymous SNV	NPR3:NM_000908:exon8:c.A1561G:p.N521D,NPR3:NM_001204375:exon8:c.A1564G:p.N522D,NPR3:NM_001204376:exon8:c.A913G:p.N305D	exonic	ENSG00000113389	NA	nonsynonymous SNV	ENSG00000113389:ENST00000265074:exon8:c.A1564G:p.N522D,ENSG00000113389:ENST00000415167:exon8:c.A1561G:p.N521D,ENSG00000113389:ENST00000415685:exon8:c.A913G:p.N305D,ENSG00000113389:ENST00000434067:exon8:c.A916G:p.N306D	Score=663;Name=lod=662	NA	5p13.3	NA	Name=BAF155,BAF170,STAT1,PRDM1_(Val90),EBF,AP-2alpha	NA	NA	rs2270915	0.18	0.18	0.152	0.195487	0.1879	0.2024	0.2147	0.0991	0.3129	0.2	0.21	0.19	0.1	0.2587	0.21	0.23	T	0.001	B	0.003	B	0.000	D	0.039	P	0	N	0.92	T	-1.064	T	0.000	T	0.054	1.976	12.56	5.0	1.137	4.122	13.745	1.975892	1.975892	0.25	0.201885	0.116876	NA	0.145	NA	12.6848484
389	12	52995020	52995020	C	T	exonic	KRT72	NA	nonsynonymous SNV	KRT72:NM_001146225:exon1:c.G217A:p.G73S,KRT72:NM_001146226:exon1:c.G217A:p.G73S,KRT72:NM_080747:exon1:c.G217A:p.G73S	exonic	ENSG00000170486	NA	nonsynonymous SNV	ENSG00000170486:ENST00000293745:exon1:c.G217A:p.G73S,ENSG00000170486:ENST00000354310:exon1:c.G217A:p.G73S,ENSG00000170486:ENST00000537672:exon1:c.G217A:p.G73S,ENSG00000170486:ENST00000550829:exon1:c.G197A:p.R66Q	Score=399;Name=lod=56	NA	12q13.13	NA	NA	NA	NA	rs57242225	0.08	0.08	0.082	0.0804712	0.0477	0.0218	0.0591	0.1982	0.0307	0.04	0.02	0.07	0.18	0.0649	0.18	0.19	T	0.618	P	0.177	B	0.112	N	0.000	P	2.13	M	-1.79	D	-0.982	T	0.001	T	0.388	2.955	15.85	3.09	1.269	0.532	2.837	2.954785	2.954785	0.09	0.044744	0.148105	NA	0.116	NA	12.6759894
390	17	39637244	39637244	A	G	exonic	KRT35	NA	nonsynonymous SNV	KRT35:NM_002280:exon1:c.T106C:p.S36P	exonic	ENSG00000197079	NA	nonsynonymous SNV	ENSG00000197079:ENST00000246639:exon1:c.T16C:p.S6P,ENSG00000197079:ENST00000393989:exon1:c.T106C:p.S36P	Score=346;Name=lod=34	NA	17q21.2	NA	NA	NA	NA	rs743686	0.53	0.53	0.519	0.574481	0.5398	0.3333	0.5591	0.7352	0.6524	0.54	0.3	0.61	0.74	0.5732	0.74	0.07	T	0.999	D	0.933	D	0.027	N	0.221	P	2.11	M	-1.58	D	-0.853	T	0.000	T	0.48	3.235	16.84	5.31	2.231	0.577	9.117	3.234991	3.234991	0.05	0.548226	0.708952	NA	0.594	NA	12.6721074
390	12	52981627	52981627	A	T	exonic	KRT72	NA	nonsynonymous SNV	KRT72:NM_001146226:exon6:c.T972A:p.D324E,KRT72:NM_001146225:exon7:c.T1098A:p.D366E,KRT72:NM_080747:exon7:c.T1098A:p.D366E	exonic	ENSG00000170486	NA	nonsynonymous SNV	ENSG00000170486:ENST00000354310:exon6:c.T972A:p.D324E,ENSG00000170486:ENST00000293745:exon7:c.T1098A:p.D366E,ENSG00000170486:ENST00000537672:exon7:c.T1098A:p.D366E,ENSG00000170486:ENST00000398066:exon8:c.T534A:p.D178E	Score=376;Name=lod=45	NA	12q13.13	Score=860;Name=V$YY1_01	Name=CTCF	NA	NA	rs7310138	0.17	0.17	0.165	0.142372	0.2465	0.1349	0.1455	0.1127	0.0808	0.24	0.12	0.16	0.11	0.1854	0.24	0.03	D	0.008	B	0.063	B	0.001	D	1.000	P	-0.695	N	-2.36	D	-1.030	T	0.000	T	0.104	1.196	9.862	0.958	0.055	-0.414	9.489	1.196455	NA	0.08	0.229767	0.136632	NA	0.225	NA	12.6716664
390	21	43708422	43708422	G	A	exonic	ABCG1	NA	synonymous SNV	ABCG1:NM_004915:exon10:c.G1260A:p.S420S,ABCG1:NM_016818:exon10:c.G1224A:p.S408S,ABCG1:NM_207174:exon10:c.G1257A:p.S419S,ABCG1:NM_207629:exon10:c.G1215A:p.S405S,ABCG1:NM_207627:exon11:c.G1230A:p.S410S,ABCG1:NM_207628:exon12:c.G1158A:p.S386S	exonic	ENSG00000160179	NA	synonymous SNV	ENSG00000160179:ENST00000343687:exon10:c.G1257A:p.S419S,ENSG00000160179:ENST00000347800:exon10:c.G1215A:p.S405S,ENSG00000160179:ENST00000361802:exon10:c.G1260A:p.S420S,ENSG00000160179:ENST00000398449:exon10:c.G1224A:p.S408S,ENSG00000160179:ENST00000340588:exon11:c.G1584A:p.S528S,ENSG00000160179:ENST00000398437:exon11:c.G1698A:p.S566S,ENSG00000160179:ENST00000398457:exon11:c.G1230A:p.S410S	Score=596;Name=lod=353	NA	21q22.3	Score=819;Name=V$PAX2_01	NA	Name=33	NA	rs141061143	0.0009	0.0009	NA	0.00139776	NA	NA	0.0014	0.0045	NA	NA	NA	NA	0.0041	0.0002	0.0041	.	.	.	.	.	.	.	.	1.000	D	.	.	.	.	-0.818	T	0.217	T	.	1.669	11.54	2.3	0.883	3.009	9.973	1.669497	1.669497	NA	0	0.000681	NA	NA	NA	12.6664666
390	18	48331553	48331553	T	C	exonic	MRO	NA	nonsynonymous SNV	MRO:NM_001127174:exon4:c.A400G:p.T134A,MRO:NM_001127175:exon4:c.A442G:p.T148A,MRO:NM_001127176:exon4:c.A442G:p.T148A,MRO:NM_031939:exon5:c.A400G:p.T134A	exonic	ENSG00000134042	NA	nonsynonymous SNV	ENSG00000134042:ENST00000431965:exon4:c.A442G:p.T148A,ENSG00000134042:ENST00000436348:exon4:c.A442G:p.T148A,ENSG00000134042:ENST00000588444:exon4:c.A400G:p.T134A,ENSG00000134042:ENST00000592966:exon4:c.A400G:p.T134A,ENSG00000134042:ENST00000256425:exon5:c.A400G:p.T134A,ENSG00000134042:ENST00000398439:exon5:c.A400G:p.T134A,ENSG00000134042:ENST00000428869:exon6:c.A400G:p.T134A	Score=485;Name=lod=125	NA	18q21.2	NA	NA	NA	NA	rs2849233	0.29	0.29	0.27	0.25639	0.4056	0.2798	0.3401	0.0484	0.3006	0.42	0.28	0.37	0.05	0.3613	0.42	1	T	0.978	D	0.719	P	0.002	N	0.194	P	2.135	M	1.49	T	-0.919	T	0.000	T	0.412	3.04	16.14	5.71	2.177	2.464	12.350	3.039804	3.039804	0.09	0.400814	0.116659	NA	0.268	NA	12.6656194
391	3	38645420	38645420	T	C	exonic	SCN5A	NA	nonsynonymous SNV	SCN5A:NM_000335:exon12:c.A1673G:p.H558R,SCN5A:NM_001099404:exon12:c.A1673G:p.H558R,SCN5A:NM_001099405:exon12:c.A1673G:p.H558R,SCN5A:NM_001160160:exon12:c.A1673G:p.H558R,SCN5A:NM_001160161:exon12:c.A1673G:p.H558R,SCN5A:NM_198056:exon12:c.A1673G:p.H558R	exonic	ENSG00000183873	NA	nonsynonymous SNV	ENSG00000183873:ENST00000414099:exon11:c.A1673G:p.H558R,ENSG00000183873:ENST00000423572:exon11:c.A1673G:p.H558R,ENSG00000183873:ENST00000449557:exon11:c.A1673G:p.H558R,ENSG00000183873:ENST00000450102:exon11:c.A1673G:p.H558R,ENSG00000183873:ENST00000455624:exon11:c.A1673G:p.H558R,ENSG00000183873:ENST00000333535:exon12:c.A1673G:p.H558R,ENSG00000183873:ENST00000413689:exon12:c.A1673G:p.H558R,ENSG00000183873:ENST00000425664:exon12:c.A1673G:p.H558R,ENSG00000183873:ENST00000443581:exon12:c.A1673G:p.H558R,ENSG00000183873:ENST00000451551:exon12:c.A1673G:p.H558R	Score=481;Name=lod=120	NA	3p22.2	Score=817;Name=V$GFI1_01	NA	NA	NA	rs1805124	0.21	0.21	0.217	0.230431	0.2167	0.1012	0.2277	0.3094	0.273	0.22	0.11	0.21	0.3	0.2217	0.3	1	T	0.0	B	0.0	B	0.009	N	0.998	P	-2.085	N	-3.39	D	-0.924	T	0.000	T	0.29	-0.946	0.349	2.44	0.109	1.656	15.575	-0.945829	NA	1	0.232092	0.274833	ID=COSM1422826,COSM1422824,COSM1422825;OCCURENCE=1(large_intestine)	0.188	CLINSIG=pathogenic|non-pathogenic|non-pathogenic;CLNDBN=Progressive_familial_heart_block_type_1A|not_specified|not_provided;CLNREVSTAT=single|single|single;CLNACC=RCV000010000.1|RCV000041604.1|RCV000058440.2;CLNDSDB=MedGen:OMIM:Orphanet|.|.;CLNDSDBID=C1879286:113900:ORPHA871|.|.	12.6628414
391	17	39579059	39579059	G	A	exonic	KRT37	NA	stopgain	KRT37:NM_003770:exon3:c.C703T:p.Q235X	exonic	ENSG00000108417	NA	stopgain	ENSG00000108417:ENST00000225550:exon3:c.C703T:p.Q235X	Score=455;Name=lod=94	NA	17q21.2	NA	NA	NA	NA	rs78158550	0.17	0.17	0.092	0.172125	0.1759	0.3214	0.1268	0.034	0.2331	0.18	0.31	0.13	0.04	0.1619	0.31	0	D	.	.	.	.	0.512	N	0.000	P	.	.	.	.	.	.	.	.	.	4.683	25.9	3.87	1.016	3.380	13.752	4.682848	4.682848	0	NA	NA	NA	0.109	NA	12.6622
392	2	142567910	142567910	T	C	exonic	LRP1B	NA	nonsynonymous SNV	LRP1B:NM_018557:exon2:c.A143G:p.Q48R	exonic	ENSG00000168702	NA	nonsynonymous SNV	ENSG00000168702:ENST00000389484:exon2:c.A143G:p.Q48R,ENSG00000168702:ENST00000434794:exon2:c.A143G:p.Q48R	Score=670;Name=lod=703	NA	2q22.2	Score=968;Name=V$LYF1_01	Name=USF2,USF-1	NA	NA	rs12990449	0.22	0.22	0.231	0.217452	0.2296	0.3532	0.1787	0.0658	0.2975	0.22	0.37	0.16	0.06	0.2338	0.37	0.54	T	0.001	B	0.005	B	0.002	N	0.797	P	0.315	N	-3.68	D	-1.072	T	0.000	T	0.269	2.335	13.77	4.45	0.946	3.525	7.876	2.335108	2.335108	0.15	0.215349	0.096913	NA	0.196	NA	12.6545844
392	1	27332466	27332466	T	C	exonic	FAM46B	NA	nonsynonymous SNV	FAM46B:NM_052943:exon2:c.A1247G:p.H416R	exonic	ENSG00000158246	NA	nonsynonymous SNV	ENSG00000158246:ENST00000289166:exon2:c.A1247G:p.H416R	Score=537;Name=lod=203	NA	1p36.11	NA	Name=Pol2	Name=42	NA	rs61737590	0.04	0.04	0.026	0.0457268	0.0577	0.0069	0.0403	0.0628	0.0542	0.04	0.01	0.04	0.06	0.0559	0.067	0.64	T	0.67	P	0.231	B	0.937	N	0.998	N	-0.695	N	1.99	T	-1.026	T	0.002	T	0.037	-0.365	2.28	3.54	0.418	1.382	8.960	-0.364833	NA	0.13	0.067093	0.057649	NA	0.022	NA	12.6526404
392	1	12339619	12339619	A	T	exonic	VPS13D	NA	nonsynonymous SNV	VPS13D:NM_015378:exon20:c.A4514T:p.E1505V,VPS13D:NM_018156:exon20:c.A4514T:p.E1505V	exonic	ENSG00000048707	NA	nonsynonymous SNV	ENSG00000048707:ENST00000356315:exon20:c.A4514T:p.E1505V,ENSG00000048707:ENST00000358136:exon20:c.A4514T:p.E1505V	Score=596;Name=lod=354	NA	1p36.22	NA	NA	NA	NA	rs4845898	0.17	0.17	0.151	0.161142	0.2356	0.1964	0.2118	0.0151	0.2096	0.23	0.2	0.21	0.03	0.2162	0.23	0.18	T	0.925	P	0.491	P	0.000	D	0.000	P	0.695	N	0.59	T	-1.097	T	0.000	T	0.238	3.472	17.77	6.02	2.304	4.771	16.542	3.471713	3.471713	0.09	0.22907	0.043123	NA	0.101	NA	12.6524634
392	5	147593497	147593497	C	A	exonic	SPINK6	NA	nonsynonymous SNV	SPINK6:NM_205841:exon3:c.C106A:p.P36T,SPINK6:NM_001195290:exon4:c.C106A:p.P36T	exonic	ENSG00000178172	NA	nonsynonymous SNV	ENSG00000178172:ENST00000325630:exon3:c.C106A:p.P36T,ENSG00000178172:ENST00000514389:exon4:c.C106A:p.P36T	Score=562;Name=lod=256	NA	5q32	NA	NA	NA	NA	rs12186491	0.7	0.7	0.659	0.679313	0.9185	0.6954	0.8833	0.2489	0.8538	0.91	0.67	0.88	0.26	0.8441	0.92	0.04	D	1.0	D	0.999	D	0.000	D	0.044	P	.	.	-0.84	T	-0.934	T	0.000	T	0.3	2.024	12.72	5.75	2.885	1.358	15.818	2.02375	2.02375	0.27	0.923023	0.384022	NA	0.659	NA	12.6477104
392	2	68364478	68364478	T	C	exonic	WDR92	NA	nonsynonymous SNV	WDR92:NM_001256476:exon6:c.A721G:p.M241V,WDR92:NM_138458:exon6:c.A721G:p.M241V	exonic	ENSG00000243667	NA	nonsynonymous SNV	ENSG00000243667:ENST00000295121:exon6:c.A721G:p.M241V,ENSG00000243667:ENST00000406245:exon6:c.A418G:p.M140V,ENSG00000243667:ENST00000409164:exon6:c.A721G:p.M241V	Score=643;Name=lod=545	NA	2p14	NA	NA	Name=2	NA	rs13009282	0.17	0.17	0.166	0.177316	0.2177	0.1538	0.1988	0.1641	0.1626	0.22	0.16	0.17	0.13	0.2123	0.26	0.23	T	0.0	B	0.001	B	0.000	D	0.000	P	1.4	L	1.71	T	-1.091	T	0.000	T	0.368	2.063	12.86	4.81	2.308	3.431	12.234	2.063138	2.063138	0.05	0.257558	0.159555	ID=COSM148870;OCCURENCE=1(stomach)	0.319	NA	12.6457754
393	6	31239082	31239082	G	C	exonic	HLA-C	NA	synonymous SNV	HLA-C:NM_001243042:exon3:c.C387G:p.P129P,HLA-C:NM_002117:exon3:c.C387G:p.P129P	exonic	ENSG00000204525	NA	nonsynonymous SNV	ENSG00000204525:ENST00000376237:exon3:c.C370G:p.R124G	NA	NA	6p21.33	NA	Name=Pol2-4H8	Name=74	NA	rs1050384	0.21	0.21	0.126	0.223043	0.2157	0.1766	0.2651	0.2625	0.1953	0.2	0.19	0.21	0.23	0.1398	0.23	0	D	.	.	.	.	.	.	0.011	P	.	.	.	.	-0.972	T	0.046	T	.	-0.665	1.086	-5.62	-4.526	-6.812	5.265	-0.665366	NA	0	NA	NA	NA	0.051	NA	12.6445
393	11	4510587	4510587	C	T	exonic	OR52K1	NA	nonsynonymous SNV	OR52K1:NM_001005171:exon1:c.C457T:p.R153W	exonic	ENSG00000196778	NA	nonsynonymous SNV	ENSG00000196778:ENST00000307632:exon1:c.C457T:p.R153W	NA	NA	11p15.4	Score=743;Name=V$PAX4_04	NA	NA	NA	rs331510	0.2	0.2	0.173	0.220647	0.2416	0.2282	0.1441	0.115	0.3885	0.22	0.25	0.19	0.11	0.2259	0.25	0.01	D	0.067	B	0.034	B	0.001	D	1.000	P	2.57	M	8.9	T	-0.990	T	0.000	T	0.177	0.284	5.539	2.18	0.661	-2.560	7.901	0.284441	NA	0.01	0.229874	0.130622	NA	0.138	NA	12.6359594
394	1	207872595	207872595	A	G	exonic	CR1L	NA	nonsynonymous SNV	CR1L:NM_175710:exon8:c.A1204G:p.N402D	exonic	ENSG00000197721	NA	nonsynonymous SNV	ENSG00000197721:ENST00000294997:exon7:c.A1036G:p.N346D,ENSG00000197721:ENST00000508064:exon8:c.A1204G:p.N402D	Score=304;Name=lod=23	NA	1q32.2	NA	Name=CTCF	NA	NA	rs12729569	0.14	0.14	0.105	0.111621	0.2535	0.0317	0.1441	0.053	0.1043	0.26	0.04	0.18	0.05	0.1888	0.26	0.3	T	0.994	D	0.968	D	.	.	1.000	P	1.25	L	-0.03	T	-1.083	T	0.000	T	0.04	2.416	14.04	1.65	1.027	3.166	5.443	2.416352	2.416352	0.19	0.262844	0.089532	NA	0.051	NA	12.6281894
394	7	550467	550467	G	A	exonic	PDGFA	NA	synonymous SNV	PDGFA:NM_002607:exon4:c.C432T:p.R144R,PDGFA:NM_033023:exon4:c.C432T:p.R144R	exonic	ENSG00000197461	NA	synonymous SNV	ENSG00000197461:ENST00000354513:exon4:c.C432T:p.R144R,ENSG00000197461:ENST00000400761:exon4:c.C459T:p.R153R,ENSG00000197461:ENST00000402802:exon4:c.C432T:p.R144R	Score=387;Name=lod=50	NA	7p22.3	Score=809;Name=V$PAX4_01	NA	Name=3	NA	rs149090369	0.02	0.02	0.008	0.0323482	0.003	NA	0.1398	0.0439	0.0041	0.01	NA	0.07	0.03	0.0336	0.07	0.02	D	.	.	.	.	0.000	D	0.846	D	.	.	.	.	-0.801	T	0.028	T	.	-0.929	0.381	-1.84	-0.293	-0.053	10.925	-0.928605	NA	NA	0.00291	0.042935	NA	0.014	NA	12.6271566
395	1	151015868	151015868	G	A	exonic	BNIPL	NA	nonsynonymous SNV	BNIPL:NM_001159642:exon6:c.G431A:p.S144N,BNIPL:NM_138278:exon6:c.G677A:p.S226N	exonic	ENSG00000163141	NA	nonsynonymous SNV	ENSG00000163141:ENST00000485855:exon3:c.G431A:p.S144N,ENSG00000163141:ENST00000295294:exon6:c.G431A:p.S144N,ENSG00000163141:ENST00000368931:exon6:c.G677A:p.S226N	Score=577;Name=lod=296	NA	1q21.3	NA	NA	NA	NA	rs12068365	0.06	0.06	0.076	0.0583067	0.0656	NA	0.036	0.146	0.0082	0.07	NA	0.04	0.15	0.0611	0.16	0.32	T	0.722	P	0.358	B	0.000	D	0.818	P	0.38	N	1.78	T	-1.023	T	0.016	T	0.027	3.267	16.96	4.36	1.160	3.521	7.167	3.267359	3.267359	0.06	0.082442	0.156605	NA	0.065	NA	12.6241914
395	12	101587518	101587518	C	T	exonic	SLC5A8	NA	nonsynonymous SNV	SLC5A8:NM_145913:exon5:c.G577A:p.V193I	exonic	ENSG00000256870	NA	nonsynonymous SNV	ENSG00000256870:ENST00000536262:exon5:c.G577A:p.V193I	Score=558;Name=lod=247	NA	12q23.1	NA	NA	NA	NA	rs1709189	0.29	0.29	0.317	0.279353	0.2475	0.5437	0.1268	0.2224	0.2249	0.23	0.52	0.15	0.22	0.2393	0.52	0.14	T	0.0	B	0.008	B	0.000	D	0.018	P	0.525	N	-2.3	D	-0.956	T	0.000	T	0.062	2.545	14.47	3.6	1.291	1.947	12.077	2.54487	2.54487	0.08	0.224419	0.185883	NA	0.232	NA	12.6221144
395	14	60976537	60976537	C	A	exonic	SIX6	NA	nonsynonymous SNV	SIX6:NM_007374:exon1:c.C421A:p.H141N	exonic	ENSG00000184302	NA	nonsynonymous SNV	ENSG00000184302:ENST00000327720:exon1:c.C421A:p.H141N	Score=547;Name=lod=222	NA	14q23.1	Score=895;Name=V$MYOD_01	NA	NA	NA	rs33912345	0.39	0.39	0.354	0.341454	0.5974	0.2133	0.6599	0.0318	0.4029	0.61	0.24	0.6	0.04	0.5153	0.61	0.1	T	0.0	B	0.002	B	0.000	D	0.000	P	-1.37	N	-3.86	D	-0.959	T	0.000	T	0.091	0.917	8.731	5.38	2.804	3.798	14.842	0.916682	NA	0.59	0.599093	0.116659	NA	0.42	NA	12.6215404
395	1	12389953	12389953	T	C	exonic	VPS13D	NA	synonymous SNV	VPS13D:NM_015378:exon37:c.T8265C:p.D2755D,VPS13D:NM_018156:exon37:c.T8265C:p.D2755D	exonic	ENSG00000048707	NA	synonymous SNV	ENSG00000048707:ENST00000356315:exon37:c.T8265C:p.D2755D,ENSG00000048707:ENST00000358136:exon37:c.T8265C:p.D2755D	Score=560;Name=lod=251	NA	1p36.22	Score=684;Name=V$BRACH_01	NA	NA	NA	rs79566132	0.02	0.02	0.02	0.0221645	0.0099	NA	0.0144	0.0628	0.0082	0.01	NA	0.02	0.07	0.0176	0.07	.	.	.	.	.	.	.	.	1.000	D	.	.	.	.	-1.041	T	0.029	T	.	1.2	9.877	4.63	1.108	1.658	11.833	1.20047	NA	NA	0.01907	0.065365	NA	0.014	NA	12.6200966
395	3	154018887	154018887	G	C	exonic	DHX36	NA	nonsynonymous SNV	DHX36:NM_001114397:exon10:c.C1247G:p.S416C,DHX36:NM_020865:exon10:c.C1247G:p.S416C	exonic	ENSG00000174953	NA	nonsynonymous SNV	ENSG00000174953:ENST00000308361:exon10:c.C1247G:p.S416C,ENSG00000174953:ENST00000329463:exon10:c.C1247G:p.S416C,ENSG00000174953:ENST00000481941:exon10:c.C989G:p.S330C,ENSG00000174953:ENST00000496811:exon10:c.C1247G:p.S416C,ENSG00000174953:ENST00000544526:exon10:c.C1247G:p.S416C	Score=621;Name=lod=444	NA	3q25.2	NA	NA	NA	NA	rs9438	0.41	0.41	0.378	0.414337	0.4115	0.4841	0.4049	0.3949	0.3783	0.4	0.46	0.4	0.38	0.4018	0.46	0.14	T	0.97	D	0.698	P	0.000	D	0.044	P	1.24	L	2.49	T	-0.816	T	0.000	T	0.257	2.232	13.42	5.89	2.788	4.847	16.498	2.23161	2.23161	0.12	0.402442	0.357694	NA	0.355	NA	12.6175914
396	8	145114844	145114844	C	T	exonic	OPLAH	NA	nonsynonymous SNV	OPLAH:NM_017570:exon2:c.G92A:p.R31Q	exonic	ENSG00000178814	NA	nonsynonymous SNV	ENSG00000178814:ENST00000426825:exon2:c.G92A:p.R31Q	Score=526;Name=lod=183	NA	8q24.3	Score=849;Name=V$HMX1_01	NA	NA	NA	rs7004867	0.07	0.07	0.077	0.0617013	0.0865	0.001	0.0504	0.1195	0.0286	0.08	0.0017	0.06	0.14	0.0624	0.14	0.29	T	0.8	P	0.243	B	0.000	N	0.004	P	.	.	.	.	-1.073	T	0.001	T	0.084	1.295	10.24	4.37	1.221	4.204	11.898	1.294808	1.294808	0.36	0.070925	0.110016	ID=COSM454210;OCCURENCE=2(breast)	0.058	NA	12.6135084
396	1	206634526	206634526	T	A	exonic	SRGAP2	NA	unknown	UNKNOWN	exonic	ENSG00000163486	NA	nonsynonymous SNV	ENSG00000163486:ENST00000414007:exon19:c.T2557A:p.S853T	Score=579;Name=lod=301	NA	1q32.1	Score=816;Name=V$ARP1_01	NA	NA	NA	rs116377172	0.01	0.01	0.013	0.0071885	0.0229	NA	0.0159	0.0015	NA	0.03	NA	0.03	0.0041	0.0131	0.03	0.33	T	.	.	.	.	0.000	D	.	.	.	.	2.99	T	-1.094	T	0.018	T	0.425	2.461	14.19	5.96	2.285	4.946	16.448	2.461103	2.461103	0.15	0.02027	0.004757	NA	NA	NA	12.6103967
396	10	99125949	99125949	C	T	exonic	RRP12	NA	nonsynonymous SNV	RRP12:NM_001145114:exon27:c.G3250A:p.G1084S,RRP12:NM_015179:exon29:c.G3433A:p.G1145S	exonic	ENSG00000052749	NA	nonsynonymous SNV	ENSG00000052749:ENST00000536831:exon23:c.G2587A:p.G863S,ENSG00000052749:ENST00000315563:exon26:c.G3133A:p.G1045S,ENSG00000052749:ENST00000414986:exon27:c.G3250A:p.G1084S,ENSG00000052749:ENST00000370992:exon29:c.G3433A:p.G1145S	Score=456;Name=lod=95	NA	10q24.1	NA	NA	NA	NA	rs2275580	0.44	0.44	0.393	0.395966	0.5934	0.3968	0.562	0.1271	0.4376	0.6	0.43	0.57	0.12	0.5342	0.6	0.52	T	0.991	D	0.359	B	0.000	D	0.000	P	2.045	M	1.5	T	-0.932	T	0.000	T	0.25	3.819	19.39	4.28	2.422	5.615	12.141	3.819004	3.819004	0.11	0.597209	0.210622	NA	0.399	NA	12.6085244
396	12	112471090	112471090	G	T	exonic	NAA25	NA	nonsynonymous SNV	NAA25:NM_024953:exon23:c.C2743A:p.L915I	exonic	ENSG00000111300	NA	nonsynonymous SNV	ENSG00000111300:ENST00000261745:exon23:c.C2743A:p.L915I	Score=637;Name=lod=518	NA	12q24.13	NA	NA	NA	NA	rs12298022	0.11	0.11	0.12	0.11242	0.0706	NA	0.098	0.298	0.0307	0.06	NA	0.12	0.3	0.0811	0.3	0.16	T	0.957	D	0.458	P	0.004	N	0.023	P	0.55	N	1.31	T	-0.985	T	0.000	T	0.074	2.622	14.73	5.01	2.816	3.008	14.549	2.621707	2.621707	0.24	0.07314	0.257149	NA	0.109	NA	12.6084934
396	14	20444607	20444607	C	G	exonic	OR4K15	NA	nonsynonymous SNV	OR4K15:NM_001005486:exon1:c.C930G:p.I310M	exonic	ENSG00000169488	NA	nonsynonymous SNV	ENSG00000169488:ENST00000305051:exon1:c.C930G:p.I310M	Score=336;Name=lod=31	NA	14q11.2	NA	NA	NA	NA	rs10135467	0.18	0.18	0.174	0.219449	0.2227	0.123	0.1715	0.2186	0.3507	0.23	0.12	0.18	0.2	0.2371	0.27	0	D	1.0	D	0.988	D	0.000	D	0.935	P	2.195	M	0.41	T	-1.081	T	0.000	T	0.334	2.005	12.66	-0.451	-0.217	-0.927	3.784	2.004692	2.004692	0.01	0.265581	0.240009	NA	0.196	NA	12.6079524
397	5	118861713	118861713	A	G	exonic	HSD17B4	NA	nonsynonymous SNV	HSD17B4:NM_001199292:exon18:c.A1621G:p.I541V,HSD17B4:NM_000414:exon19:c.A1675G:p.I559V,HSD17B4:NM_001199291:exon20:c.A1750G:p.I584V	exonic	ENSG00000133835	NA	nonsynonymous SNV	ENSG00000133835:ENST00000513628:exon14:c.A1264G:p.I422V,ENSG00000133835:ENST00000509514:exon15:c.A889G:p.I297V,ENSG00000133835:ENST00000515320:exon18:c.A1621G:p.I541V,ENSG00000133835:ENST00000256216:exon19:c.A1675G:p.I559V,ENSG00000133835:ENST00000414835:exon19:c.A1255G:p.I419V,ENSG00000133835:ENST00000504811:exon20:c.A1750G:p.I584V,ENSG00000133835:ENST00000510025:exon20:c.A1603G:p.I535V	Score=461;Name=lod=100	NA	5q23.1	Score=935;Name=V$NKX25_02	NA	NA	NA	rs11205	0.41	0.41	0.384	0.40016	0.4125	0.4177	0.4683	0.4092	0.3088	0.44	0.37	0.45	0.37	0.411	0.45	0.17	T	0.791	P	0.332	B	0.000	D	0.000	P	0.885	L	-1.4	T	-0.983	T	0.000	T	0.329	2.588	14.61	5.39	2.050	3.836	14.383	2.58774	2.58774	0.08	0.40907	0.395322	ID=COSM1130959;OCCURENCE=1(prostate)	0.333	NA	12.6007634
397	9	36087876	36087876	G	A	exonic	RECK	NA	nonsynonymous SNV	RECK:NM_021111:exon9:c.G823A:p.V275I	exonic	ENSG00000122707	NA	nonsynonymous SNV	ENSG00000122707:ENST00000377966:exon9:c.G823A:p.V275I	Score=480;Name=lod=119	NA	9p13.3	NA	NA	NA	NA	rs16932912	0.15	0.15	0.129	0.129593	0.0785	0.2659	0.1225	0.0968	0.091	0.08	0.28	0.11	0.11	0.0888	0.28	0.03	D	0.665	P	0.103	B	0.008	N	0.652	P	-0.345	N	0.94	T	-1.019	T	0.000	T	0.107	2.634	14.77	5.48	2.575	4.794	16.841	2.63429	2.63429	0.51	0.066512	0.091693	NA	0.101	NA	12.5995214
397	10	61831271	61831271	T	C	exonic	ANK3	NA	nonsynonymous SNV	ANK3:NM_020987:exon37:c.A9368G:p.K3123R	exonic	ENSG00000151150	NA	nonsynonymous SNV	ENSG00000151150:ENST00000280772:exon37:c.A9368G:p.K3123R	Score=652;Name=lod=597	NA	10q21.2	NA	NA	NA	NA	rs10821668	0.15	0.15	0.126	0.125799	0.2724	0.0347	0.2104	0.0204	0.1513	0.27	0.04	0.22	0.03	0.2019	0.27	0.54	T	0.001	B	0.004	B	0.000	D	0.000	P	-0.895	N	-0.03	T	-1.059	T	0.000	T	0.078	-1.292	0.039	5.23	1.983	4.653	9.621	-1.291949	NA	0.85	0.26093	0.051294	NA	0.174	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116349.2;CLNDSDB=.;CLNDSDBID=.	12.5981034
398	20	43547677	43547677	T	G	exonic	PABPC1L	NA	nonsynonymous SNV	PABPC1L:NM_001124756:exon4:c.T634G:p.S212A	exonic	ENSG00000101104	NA	nonsynonymous SNV	ENSG00000101104:ENST00000217073:exon4:c.T634G:p.S212A,ENSG00000101104:ENST00000217074:exon4:c.T634G:p.S212A,ENSG00000101104:ENST00000255136:exon4:c.T634G:p.S212A,ENSG00000101104:ENST00000537323:exon4:c.T634G:p.S212A	Score=505;Name=lod=151	NA	20q13.12	Score=824;Name=V$GRE_C	NA	NA	NA	rs2075960	0.23	0.23	0.205	0.23143	0.2515	0.2123	0.3458	0.1838	0.2137	0.24	0.22	0.33	0.17	0.2465	0.33	0.29	T	0.013	B	0.066	B	0.001	D	0.000	P	0.68	N	-2.0	D	-1.093	T	0.000	T	0.075	1.411	10.66	3.94	0.929	3.107	12.128	1.411498	1.411498	0.33	0.243439	0.172513	NA	0.152	NA	12.5918944
398	15	85341859	85341859	G	A	exonic	ZNF592	NA	nonsynonymous SNV	ZNF592:NM_014630:exon8:c.G2777A:p.S926N	exonic	ENSG00000166716	NA	nonsynonymous SNV	ENSG00000166716:ENST00000299927:exon5:c.G2777A:p.S926N,ENSG00000166716:ENST00000560079:exon8:c.G2777A:p.S926N	Score=417;Name=lod=66	NA	15q25.3	Score=897;Name=V$MEIS1_01	NA	NA	NA	rs8182086	0.34	0.34	0.324	0.378395	0.2326	0.4782	0.3602	0.3775	0.4397	0.24	0.45	0.34	0.38	0.2926	0.45	0.55	T	0.208	B	0.038	B	0.016	N	0.848	P	0.345	N	6.26	T	-0.973	T	0.000	T	0.113	2.74	15.12	4.75	2.439	1.816	15.291	2.740064	2.740064	0.18	0.21947	0.328189	ID=COSM1375070;OCCURENCE=1(large_intestine)	0.406	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118956.2;CLNDSDB=.;CLNDSDBID=.	12.5886634
399	3	57902639	57902639	G	A	exonic	SLMAP	NA	synonymous SNV	SLMAP:NM_007159:exon19:c.G2043A:p.Q681Q	exonic	ENSG00000163681	NA	synonymous SNV	ENSG00000163681:ENST00000442599:exon6:c.G498A:p.Q166Q,ENSG00000163681:ENST00000494088:exon7:c.G573A:p.Q191Q,ENSG00000163681:ENST00000495364:exon8:c.G696A:p.Q232Q,ENSG00000163681:ENST00000416870:exon18:c.G573A:p.Q191Q,ENSG00000163681:ENST00000449503:exon18:c.G1980A:p.Q660Q,ENSG00000163681:ENST00000295952:exon19:c.G2043A:p.Q681Q,ENSG00000163681:ENST00000295951:exon20:c.G2043A:p.Q681Q,ENSG00000163681:ENST00000428312:exon20:c.G2094A:p.Q698Q	Score=698;Name=lod=916	NA	3p14.3	Score=881;Name=V$STAT5A_01	NA	NA	NA	rs17745496	0.02	0.02	0.013	0.0133786	0.0388	NA	0.0259	0.0023	0.0072	0.03	NA	0.02	0.002	0.0233	0.033	.	.	.	.	.	.	.	.	1.000	D	.	.	.	.	-0.701	T	0.147	T	.	0.222	5.196	4.99	1.482	2.674	14.727	0.221671	NA	NA	0.032209	0.004766	NA	0.022	NA	12.5723576
399	11	125769354	125769354	T	C	exonic	HYLS1	NA	nonsynonymous SNV	HYLS1:NM_001134793:exon3:c.T91C:p.C31R,HYLS1:NM_145014:exon4:c.T91C:p.C31R	exonic	ENSG00000198331	NA	nonsynonymous SNV	ENSG00000198331:ENST00000425380:exon3:c.T91C:p.C31R,ENSG00000198331:ENST00000526028:exon3:c.T91C:p.C31R,ENSG00000198331:ENST00000356438:exon4:c.T91C:p.C31R	Score=397;Name=lod=55	NA	11q24.2	NA	NA	NA	NA	rs667782	0.3	0.3	0.306	0.299321	0.2416	0.3542	0.2291	0.3177	0.3272	0.26	0.37	0.19	0.35	0.2831	0.37	0.01	D	0.853	P	0.549	P	0.010	N	0.000	P	1.61	L	-0.81	T	-1.095	T	0.000	T	0.391	3.646	18.54	6.17	2.371	4.052	15.052	3.646288	3.646288	0	0.237962	0.301	NA	0.304	NA	12.5706714
399	10	115489167	115489167	G	A	exonic	CASP7	NA	nonsynonymous SNV	CASP7:NM_033340:exon8:c.G746A:p.R249K	exonic	ENSG00000165806	NA	nonsynonymous SNV	ENSG00000165806:ENST00000369331:exon8:c.G746A:p.R249K	Score=544;Name=lod=216	NA	10q25.3	Score=853;Name=V$OCT1_05	NA	NA	NA	rs2227309	0.27	0.27	0.257	0.2498	0.2525	0.4087	0.2579	0.1346	0.2331	0.24	0.42	0.28	0.14	0.2595	0.42	0	D	0.176	B	0.066	B	.	.	0.000	P	.	.	3.07	T	-0.927	T	0.000	T	.	2.737	15.11	3.97	1.450	4.005	11.314	2.736679	2.736679	0	0.252674	0.14798	NA	0.21	NA	12.5686594
399	15	86278309	86278309	G	A	exonic	AKAP13	NA	nonsynonymous SNV	AKAP13:NM_001270546:exon23:c.G3232A:p.G1078S,AKAP13:NM_006738:exon31:c.G7381A:p.G2461S,AKAP13:NM_007200:exon31:c.G7369A:p.G2457S	exonic	ENSG00000170776	NA	nonsynonymous SNV	ENSG00000170776:ENST00000394510:exon18:c.G2104A:p.G702S,ENSG00000170776:ENST00000361243:exon31:c.G7381A:p.G2461S,ENSG00000170776:ENST00000394518:exon31:c.G7369A:p.G2457S	Score=343;Name=lod=33	NA	15q25.3	NA	NA	NA	NA	rs2241268	0.16	0.16	0.147	0.136581	0.2793	0.0486	0.2248	0.0098	0.1892	0.28	0.06	0.23	0.01	0.2189	0.28	0.12	T	0.999	D	0.965	D	.	.	0.000	P	1.075	L	2.14	T	-0.999	T	0.000	T	0.274	3.418	17.55	4.86	1.458	2.615	14.2	3.418288	3.418288	0.07	0.266574	0.044959	NA	0.217	NA	12.5685594
399	17	39742807	39742807	C	T	exonic	KRT14	NA	nonsynonymous SNV	KRT14:NM_000526:exon1:c.G280A:p.A94T	exonic	ENSG00000186847	NA	nonsynonymous SNV	ENSG00000186847:ENST00000167586:exon1:c.G280A:p.A94T	Score=295;Name=lod=21	NA	17q21.2	NA	NA	Name=2	NA	rs3826550	0.3	0.3	0.288	0.290735	0.4145	0.0575	0.2709	0.4153	0.2495	0.42	0.05	0.3	0.41	0.3525	0.42	0.39	T	0.048	B	0.08	B	0.714	N	0.999	P	1.795	L	-2.51	D	-1.073	T	0.000	T	0.317	0.497	6.698	5.11	2.541	0.065	14.229	0.497409	NA	0.5	NA	NA	NA	0.333	CLINSIG=untested;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000056702.1;CLNDSDB=.;CLNDSDBID=.	12.5663334
400	3	193081122	193081122	G	T	exonic	ATP13A5	NA	nonsynonymous SNV	ATP13A5:NM_198505:exon3:c.C287A:p.S96Y	exonic	ENSG00000187527	NA	nonsynonymous SNV	ENSG00000187527:ENST00000342358:exon3:c.C287A:p.S96Y,ENSG00000187527:ENST00000446087:exon4:c.C353A:p.S118Y	Score=414;Name=lod=64	NA	3q29	NA	NA	NA	NA	rs12637558	0.41	0.41	0.38	0.415935	0.4125	0.5764	0.4337	0.2133	0.5153	0.41	0.56	0.4	0.24	0.4347	0.56	0.04	D	0.567	P	0.366	B	0.002	N	0.133	P	2.25	M	0.91	T	-0.899	T	0.000	T	0.151	3.255	16.92	4.17	1.428	3.546	13.298	3.255259	3.255259	0.02	0.426279	0.2601	ID=COSM77312;OCCURENCE=1(ovary)	0.319	NA	12.5598544
401	8	86021994	86021994	G	A	exonic	LRRCC1	NA	nonsynonymous SNV	LRRCC1:NM_033402:exon2:c.G269A:p.C90Y	exonic	ENSG00000133739	NA	nonsynonymous SNV	ENSG00000133739:ENST00000414626:exon1:c.G209A:p.C70Y,ENSG00000133739:ENST00000360375:exon2:c.G269A:p.C90Y	Score=561;Name=lod=254	NA	8q21.2	NA	NA	NA	NA	rs62525422	0.05	0.05	0.04	0.0565096	0.0905	0.0149	0.0389	0.0083	0.1421	0.09	0.01	0.04	0.01	0.0945	0.11	0.06	T	0.969	D	0.66	P	0.022	N	0.549	P	0	N	3.01	T	-0.995	T	0.001	T	0.156	2.457	14.18	5.52	2.582	5.294	12.742	2.457495	2.457495	0.08	0.110103	0.019859	NA	0.043	NA	12.5382304
401	11	7079038	7079038	G	A	exonic	NLRP14	NA	nonsynonymous SNV	NLRP14:NM_176822:exon7:c.G2422A:p.E808K	exonic	ENSG00000158077	NA	nonsynonymous SNV	ENSG00000158077:ENST00000299481:exon7:c.G2422A:p.E808K	Score=336;Name=lod=31	NA	11p15.4	NA	Name=GATA-2	NA	NA	rs10839708	0.56	0.56	0.552	0.565895	0.6024	0.7063	0.6124	0.3502	0.6421	0.6	0.67	0.59	0.35	0.6051	0.67	0.3	T	0.955	P	0.721	P	0.000	D	0.226	P	1.58	L	1.0	T	-0.966	T	0.000	T	0.174	4.279	22.4	3.98	1.205	3.157	9.472	4.278511	4.278511	0.03	0.588338	0.360745	NA	0.478	NA	12.5374954
401	5	145499996	145499996	C	T	exonic	LARS	NA	nonsynonymous SNV	LARS:NM_020117:exon31:c.G3263A:p.R1088K	exonic	ENSG00000133706	NA	nonsynonymous SNV	ENSG00000133706:ENST00000274562:exon30:c.G3182A:p.R1061K,ENSG00000133706:ENST00000510191:exon30:c.G3101A:p.R1034K,ENSG00000133706:ENST00000545646:exon30:c.G3125A:p.R1042K,ENSG00000133706:ENST00000394434:exon31:c.G3263A:p.R1088K	Score=617;Name=lod=430	NA	5q32	NA	NA	NA	NA	rs10988	0.2	0.2	0.169	0.184904	0.2535	0.1984	0.3775	0.0189	0.1881	0.25	0.2	0.3	0.04	0.2643	0.3	0.3	T	0.073	B	0.045	B	0.000	D	0.000	P	1.95	M	0.0	T	-1.066	T	0.000	T	0.197	2.82	15.39	4.46	1.371	4.941	14.386	2.819804	2.819804	0.31	0.278721	0.067862	ID=COSM149961;OCCURENCE=1(stomach)	0.275	NA	12.5368124
402	19	52876385	52876385	G	A	exonic	ZNF880	NA	nonsynonymous SNV	ZNF880:NM_001145434:exon2:c.G34A:p.V12M	exonic	ENSG00000221923	NA	nonsynonymous SNV	ENSG00000221923:ENST00000344085:exon2:c.G34A:p.V12M,ENSG00000221923:ENST00000422689:exon2:c.G34A:p.V12M,ENSG00000221923:ENST00000424032:exon2:c.G34A:p.V12M,ENSG00000221923:ENST00000597976:exon2:c.G34A:p.V12M,ENSG00000221923:ENST00000600321:exon2:c.G34A:p.V12M	Score=355;Name=lod=37	NA	19q13.41	NA	NA	NA	NA	rs14048	0.05	0.05	0.052	0.0403355	0.1163	NA	0.0303	0.0061	0.0573	0.12	NA	0.04	0.01	0.0755	0.12	0.02	D	0.999	D	0.856	P	.	.	1.000	P	3.685	H	2.88	T	-1.059	T	0.002	T	0.305	1.038	9.241	1.61	0.870	1.214	8.247	1.038238	NA	0	0.107794	0.023844	NA	0.022	NA	12.5337394
402	3	108189627	108189627	C	T	exonic	MYH15	NA	nonsynonymous SNV	MYH15:NM_014981:exon14:c.G1361A:p.R454Q	exonic	ENSG00000144821	NA	nonsynonymous SNV	ENSG00000144821:ENST00000273353:exon14:c.G1361A:p.R454Q	NA	NA	3q13.13	NA	NA	NA	NA	rs4299484	0.15	0.15	0.136	0.100839	0.2932	NA	0.1873	0.0098	0.0685	0.3	NA	0.22	0.02	0.207	0.3	0	D	1.0	D	0.999	D	.	.	1.000	P	2.935	M	-2.38	D	-1.239	T	0.000	T	0.238	4.411	23.4	2.58	0.557	0.405	7.019	4.411069	4.411069	0	0.300747	0.055611	ID=COSM1130381;OCCURENCE=1(prostate)	0.167	NA	12.5323864
402	1	171753039	171753039	A	G	exonic	METTL13	NA	nonsynonymous SNV	METTL13:NM_001007239:exon2:c.A313G:p.M105V,METTL13:NM_014955:exon2:c.A55G:p.M19V,METTL13:NM_015935:exon2:c.A313G:p.M105V	exonic	ENSG00000010165	NA	nonsynonymous SNV	ENSG00000010165:ENST00000367736:exon1:c.A64G:p.M22V,ENSG00000010165:ENST00000361735:exon2:c.A313G:p.M105V,ENSG00000010165:ENST00000362019:exon2:c.A55G:p.M19V,ENSG00000010165:ENST00000367737:exon2:c.A313G:p.M105V,ENSG00000010165:ENST00000458517:exon3:c.A310G:p.M104V	Score=500;Name=lod=144	NA	1q24.3	Score=862;Name=V$BACH2_01	NA	NA	NA	rs2232816	0.34	0.34	0.321	0.306909	0.2445	0.5238	0.2867	0.2829	0.1943	0.24	0.53	0.29	0.3	0.2858	0.53	1	T	0.023	B	0.02	B	0.000	D	0.726	P	-0.05	N	1.07	T	-1.067	T	0.037	T	0.096	0.723	7.848	5.33	1.987	3.514	7.714	0.723345	NA	0.8	0.272093	0.309578	NA	0.362	NA	12.5309404
402	17	6441376	6441376	G	A	exonic	PITPNM3	NA	nonsynonymous SNV	PITPNM3:NM_001165966:exon2:c.C49T:p.P17S,PITPNM3:NM_031220:exon2:c.C49T:p.P17S	exonic	ENSG00000091622	NA	nonsynonymous SNV	ENSG00000091622:ENST00000262483:exon2:c.C49T:p.P17S,ENSG00000091622:ENST00000421306:exon2:c.C49T:p.P17S	Score=493;Name=lod=135	NA	17p13.2	Score=800;Name=V$ARP1_01	NA	NA	NA	rs28493751	0.06	0.06	0.055	0.0533147	0.1103	0.002	0.0648	0.0265	0.0757	0.11	0.0017	0.08	0.03	0.0842	0.11	0.1	T	0.782	P	0.349	B	0.002	N	0.874	P	0	N	1.03	T	-1.071	T	0.002	T	0.077	3.534	18.04	4.89	2.439	3.677	13.931	3.534439	3.534439	0.13	0.109186	0.044485	ID=COSM39259;OCCURENCE=1(central_nervous_system)	0.08	NA	12.5296474
402	16	15178499	15178499	G	A	exonic	RRN3	NA	nonsynonymous SNV	RRN3:NM_018427:exon7:c.C596T:p.S199L	exonic	ENSG00000085721	NA	nonsynonymous SNV	ENSG00000085721:ENST00000540462:exon4:c.C149T:p.S50L,ENSG00000085721:ENST00000429751:exon6:c.C506T:p.S169L,ENSG00000085721:ENST00000198767:exon7:c.C596T:p.S199L,ENSG00000085721:ENST00000327307:exon7:c.C497T:p.S166L,ENSG00000085721:ENST00000563559:exon7:c.C596T:p.S199L,ENSG00000085721:ENST00000564131:exon7:c.C596T:p.S199L	Score=564;Name=lod=262	NA	16p13.11	NA	NA	NA	NA	rs2541719	NA	NA	0.189	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3038	NA	.	.	0.496	P	0.099	B	0.004	U	1.000	D	1.22	L	1.14	T	-1.066	T	0.076	T	0.615	1.466	10.85	3.86	1.700	4.366	12.516	1.465668	1.465668	0.31	NA	NA	NA	NA	NA	12.5295334
402	17	55182878	55182878	C	T	exonic	AKAP1	NA	nonsynonymous SNV	AKAP1:NM_003488:exon2:c.C53T:p.A18V,AKAP1:NM_001242902:exon3:c.C53T:p.A18V,AKAP1:NM_001242903:exon3:c.C53T:p.A18V	exonic	ENSG00000121057	NA	nonsynonymous SNV	ENSG00000121057:ENST00000314126:exon2:c.C53T:p.A18V,ENSG00000121057:ENST00000337714:exon2:c.C53T:p.A18V,ENSG00000121057:ENST00000481416:exon2:c.C53T:p.A18V,ENSG00000121057:ENST00000539273:exon2:c.C53T:p.A18V,ENSG00000121057:ENST00000572156:exon2:c.C53T:p.A18V,ENSG00000121057:ENST00000572557:exon2:c.C53T:p.A18V,ENSG00000121057:ENST00000572814:exon2:c.C53T:p.A18V,ENSG00000121057:ENST00000573085:exon2:c.C53T:p.A18V,ENSG00000121057:ENST00000574683:exon2:c.C53T:p.A18V,ENSG00000121057:ENST00000575322:exon2:c.C53T:p.A18V,ENSG00000121057:ENST00000571629:exon3:c.C53T:p.A18V,ENSG00000121057:ENST00000576591:exon3:c.C53T:p.A18V	Score=435;Name=lod=78	NA	17q22	NA	NA	NA	NA	rs17761023	0.06	0.06	0.055	0.0609026	0.1143	0.005	0.0476	0.0643	0.0685	0.11	0.01	0.04	0.05	0.0885	0.11	0	D	0.545	P	0.068	B	0.000	D	0.000	P	1.31	L	2.21	T	-1.067	T	0.001	T	0.406	2.568	14.55	3.65	0.737	3.292	11.434	2.567697	2.567697	0	0.102209	0.068997	NA	0.174	NA	12.5283244
403	1	89479074	89479074	C	T	exonic	GBP3	NA	nonsynonymous SNV	GBP3:NM_018284:exon6:c.G662A:p.R221Q	exonic	ENSG00000117226	NA	nonsynonymous SNV	ENSG00000117226:ENST00000370481:exon6:c.G662A:p.R221Q,ENSG00000117226:ENST00000489444:exon6:c.G662A:p.R221Q	Score=391;Name=lod=52	NA	1p22.2	NA	NA	NA	NA	rs4656078	0.32	0.32	0.284	0.333866	0.4404	0.3075	0.2925	0.1793	0.4898	0.45	0.28	0.34	0.16	0.4182	0.45	.	.	0.997	D	0.693	P	0.096	N	1.000	P	3.41	M	-1.87	D	-0.152	T	0.555	D	0.051	3.535	18.04	-0.523	-0.185	2.143	4.647	3.535117	3.535117	0.04	0.45314	0.260218	NA	0.246	NA	12.5215934
404	9	215269	215269	A	C	exonic	C9orf66	NA	nonsynonymous SNV	C9orf66:NM_152569:exon1:c.T128G:p.L43R	exonic	ENSG00000183784	NA	nonsynonymous SNV	ENSG00000183784:ENST00000382387:exon1:c.T128G:p.L43R	NA	NA	9p24.3	NA	Name=CTCF,SMC3_(ab9263),Pol2,CCNT2,TBP,ZNF263	Name=8	NA	rs636922	0.21	0.21	0.2	0.179513	0.2634	0.3185	0.2104	0.0083	0.1595	0.25	0.32	0.21	0.01	0.3102	0.32	0	D	0.089	B	0.023	B	.	.	1.000	P	0	N	2.03	T	-0.931	T	0.000	T	0.141	1.737	11.77	-6.2	-1.934	-3.285	1.217	1.737391	1.737391	NA	0.24779	0.054595	NA	0.123	NA	12.5119434
404	7	133848257	133848257	G	T	exonic	LRGUK	NA	nonsynonymous SNV	LRGUK:NM_144648:exon7:c.G904T:p.D302Y	exonic	ENSG00000155530	NA	nonsynonymous SNV	ENSG00000155530:ENST00000285928:exon7:c.G904T:p.D302Y	Score=381;Name=lod=47	NA	7q33	NA	NA	NA	NA	rs17167553	0.17	0.17	0.157	0.177516	0.0795	0.3234	0.1599	0.1619	0.1616	0.06	0.31	0.17	0.17	0.1406	0.31	0.01	D	0.902	P	0.332	B	0.456	N	0.966	P	1.355	L	1.86	T	-0.934	T	0.000	T	0.127	3.251	16.9	3.77	1.349	1.524	4.382	3.250766	3.250766	0.02	0.101395	0.172492	NA	0.123	NA	12.5118384
404	1	98348885	98348885	G	A	exonic	DPYD	NA	nonsynonymous SNV	DPYD:NM_000110:exon2:c.C85T:p.R29C,DPYD:NM_001160301:exon2:c.C85T:p.R29C	exonic	ENSG00000188641	NA	nonsynonymous SNV	ENSG00000188641:ENST00000306031:exon2:c.C85T:p.R29C,ENSG00000188641:ENST00000370192:exon2:c.C85T:p.R29C	Score=321;Name=lod=27	NA	1p21.3	NA	NA	NA	NA	rs1801265	0.77	0.77	0.758	0.739816	0.7853	0.9137	0.7752	0.5582	0.7342	0.78	0.94	0.77	0.55	0.7652	0.94	0.18	T	0.964	D	0.663	P	0.006	N	0.000	P	.	.	-1.59	D	-0.126	T	0.456	T	0.478	3.585	18.26	5.84	2.763	2.235	12.592	3.585293	3.585293	0.17	0.775116	0.600318	NA	0.732	CLINSIG=pathogenic;CLNDBN=Dihydropyrimidine_dehydrogenase_deficiency,not_provided;CLNREVSTAT=single,not;CLNACC=RCV000000464.1,RCV000086506.1;CLNDSDB=MedGen:OMIM,.;CLNDSDBID=C2720286:274270,.	12.5077174
405	1	144915561	144915561	G	A	exonic	PDE4DIP	NA	stopgain	PDE4DIP:NM_001002811:exon10:c.C2353T:p.R785X,PDE4DIP:NM_001002812:exon14:c.C1864T:p.R622X,PDE4DIP:NM_001198834:exon14:c.C1864T:p.R622X,PDE4DIP:NM_014644:exon14:c.C1864T:p.R622X,PDE4DIP:NM_001198832:exon17:c.C2062T:p.R688X	exonic	ENSG00000178104	NA	stopgain	ENSG00000178104:ENST00000313431:exon10:c.C2353T:p.R785X,ENSG00000178104:ENST00000479408:exon10:c.C1225T:p.R409X,ENSG00000178104:ENST00000529945:exon10:c.C2353T:p.R785X,ENSG00000178104:ENST00000369349:exon14:c.C1864T:p.R622X,ENSG00000178104:ENST00000369351:exon14:c.C1864T:p.R622X,ENSG00000178104:ENST00000369354:exon14:c.C1864T:p.R622X,ENSG00000178104:ENST00000369356:exon14:c.C1864T:p.R622X,ENSG00000178104:ENST00000313382:exon17:c.C2062T:p.R688X,ENSG00000178104:ENST00000369359:exon17:c.C2275T:p.R759X,ENSG00000178104:ENST00000530740:exon17:c.C2275T:p.R759X	Score=412;Name=lod=63	NA	1q21.1	NA	NA	NA	NA	rs1778111	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	1	T	.	.	.	.	.	.	1.000	D	.	.	.	.	.	.	.	.	.	8.123	40	3.29	1.327	2.184	4.430	8.122839	8.122839	0.32	NA	NA	NA	0.493	NA	12.5
406	9	123860689	123860689	C	T	exonic	CNTRL	NA	nonsynonymous SNV	CNTRL:NM_007018:exon5:c.C647T:p.P216L	exonic	ENSG00000119397	NA	nonsynonymous SNV	ENSG00000119397:ENST00000238341:exon5:c.C647T:p.P216L,ENSG00000119397:ENST00000373865:exon6:c.C647T:p.P216L,ENSG00000119397:ENST00000373855:exon7:c.C647T:p.P216L	Score=527;Name=lod=185	NA	9q33.2	NA	NA	NA	NA	rs10818504	0.42	0.42	0.388	0.430911	0.4503	0.5704	0.4957	0.1233	0.637	0.45	0.59	0.49	0.13	0.4586	0.59	0.03	D	0.998	D	0.75	P	.	.	0.000	P	1.15	L	0.56	T	-0.900	T	0.000	T	0.098	4.019	20.6	4.73	1.382	1.322	13.889	4.01853	4.01853	0.1	0.435581	0.180436	NA	0.384	NA	12.4888524
407	1	151512895	151512895	A	G	exonic	TUFT1	NA	nonsynonymous SNV	TUFT1:NM_001126337:exon1:c.A53G:p.Q18R,TUFT1:NM_020127:exon1:c.A53G:p.Q18R	exonic	ENSG00000143367	NA	nonsynonymous SNV	ENSG00000143367:ENST00000353024:exon1:c.A53G:p.Q18R,ENSG00000143367:ENST00000368848:exon1:c.A53G:p.Q18R,ENSG00000143367:ENST00000368849:exon1:c.A53G:p.Q18R,ENSG00000143367:ENST00000392712:exon1:c.A53G:p.Q18R	Score=494;Name=lod=136	NA	1q21.3	NA	Name=c-Myc,CCNT2,HEY1,ELF1_(SC-631),TCF12,GTF2B,TBP,GTF2F1_(RAP-74),Pol2(b),TAF1,HMGN3,NRSF,SP1,Pol2,STAT3,Ini1,Pol2(phosphoS2),TAF7_(SQ-8),Sin3Ak-20,HA-E2F1,Pol2-4H8,E2F6	Name=144	NA	rs3828054	0.1	0.1	0.096	0.111821	0.1133	0.0526	0.098	0.1641	0.1104	0.12	0.03	0.1	0.17	0.1159	0.17	0.77	T	0.688	P	0.218	B	0.205	N	0.000	P	1.79	L	2.28	T	-1.046	T	0.024	T	0.135	2.634	14.77	2.54	0.335	1.688	9.012	2.634094	2.634094	0.01	0.124302	0.153881	ID=COSM423832;OCCURENCE=1(breast)	0.101	NA	12.4798314
407	1	94544234	94544234	T	C	exonic	ABCA4	NA	nonsynonymous SNV	ABCA4:NM_000350:exon10:c.A1268G:p.H423R	exonic	ENSG00000198691	NA	nonsynonymous SNV	ENSG00000198691:ENST00000370225:exon10:c.A1268G:p.H423R,ENSG00000198691:ENST00000535735:exon10:c.A1268G:p.H423R	Score=467;Name=lod=105	NA	1p22.1	NA	NA	NA	NA	rs3112831	0.25	0.25	0.209	0.220847	0.2913	0.254	0.3026	0.1316	0.1769	0.29	0.23	0.29	0.16	0.2553	0.31	0.39	T	0.0	B	0.0	B	0.000	N	0.000	P	-2.255	N	-1.74	D	-1.070	T	0.075	T	0.443	1.795	11.96	5.49	1.341	2.204	14.540	1.795287	1.795287	0.08	0.309419	0.165456	NA	0.246	CLINSIG=other;CLNDBN=not_provided,not_provided;CLNREVSTAT=mult,not;CLNACC=RCV000085383.3,RCV000085382.1;CLNDSDB=.,.;CLNDSDBID=.,.	12.4773144
408	11	123676231	123676231	G	T	exonic	OR6M1	NA	nonsynonymous SNV	OR6M1:NM_001005325:exon1:c.C827A:p.T276K	exonic	ENSG00000196099	NA	nonsynonymous SNV	ENSG00000196099:ENST00000309154:exon1:c.C827A:p.T276K	NA	NA	11q24.1	NA	NA	NA	NA	rs4936845	0.24	0.24	0.214	0.243411	0.2853	0.2946	0.317	0.1029	0.2853	0.29	0.28	0.26	0.11	0.277	0.3	0	D	0.741	P	0.735	P	0.004	U	1.000	P	3.365	M	8.39	T	-1.097	T	0.000	T	0.233	2.251	13.48	3.48	1.754	1.794	6.579	2.251267	2.251267	0.01	0.298674	0.122616	ID=COSM1352200;OCCURENCE=1(large_intestine)	0.341	NA	12.4723594
408	6	56420538	56420538	C	T	exonic	DST	NA	nonsynonymous SNV	DST:NM_015548:exon41:c.G6872A:p.R2291H,DST:NM_183380:exon51:c.G7850A:p.R2617H,DST:NM_001144770:exon52:c.G7970A:p.R2657H,DST:NM_001144769:exon54:c.G8384A:p.R2795H	exonic	ENSG00000151914	NA	nonsynonymous SNV	ENSG00000151914:ENST00000244364:exon41:c.G6872A:p.R2291H,ENSG00000151914:ENST00000446842:exon47:c.G13136A:p.R4379H,ENSG00000151914:ENST00000370788:exon51:c.G7850A:p.R2617H,ENSG00000151914:ENST00000421834:exon51:c.G7850A:p.R2617H,ENSG00000151914:ENST00000361203:exon56:c.G14108A:p.R4703H,ENSG00000151914:ENST00000370769:exon57:c.G14114A:p.R4705H,ENSG00000151914:ENST00000370754:exon60:c.G14648A:p.R4883H	Score=611;Name=lod=407	NA	6p12.1	NA	Name=KAP1	Name=66	NA	rs11756977	0.31	0.31	0.316	0.335463	0.2744	0.3482	0.2767	0.388	0.3558	0.25	0.32	0.3	0.4	0.2982	0.4	0.3	T	0.002	B	0.002	B	0.000	N	1.000	P	-1.61	N	1.32	T	-1.012	T	0.010	T	0.318	2.145	13.13	5.67	1.083	1.649	9.192	2.144711	2.144711	0.12	0.295318	0.346449	NA	0.275	NA	12.4654154
409	11	4790396	4790396	G	A	exonic	OR51F1	NA	nonsynonymous SNV	OR51F1:NM_001004752:exon1:c.C752T:p.A251V	exonic	ENSG00000188069	NA	nonsynonymous SNV	ENSG00000188069:ENST00000343430:exon1:c.C752T:p.A251V,ENSG00000188069:ENST00000380383:exon1:c.C773T:p.A258V	NA	NA	11p15.4	NA	NA	NA	NA	rs17324609	0.07	0.07	0.057	0.0459265	0.1412	NA	0.0951	0.0061	0.0143	0.14	NA	0.13	0.0041	0.0925	0.14	0.01	D	0.984	D	0.886	P	0.559	N	0.000	P	1.075	L	1.52	T	-1.102	T	0.001	T	0.187	3.964	20.3	5.24	2.728	2.740	11.825	3.963905	3.963905	0.06	0.13483	0.031804	NA	0.116	NA	12.4648034
409	19	49378994	49378994	A	G	exonic	PPP1R15A	NA	nonsynonymous SNV	PPP1R15A:NM_014330:exon3:c.A1789G:p.T597A	exonic	ENSG00000087074	NA	nonsynonymous SNV	ENSG00000087074:ENST00000200453:exon3:c.A1789G:p.T597A	Score=440;Name=lod=82	NA	19q13.33	Score=757;Name=V$TAXCREB_02	Name=Pol2,HMGN3,Pol2-4H8,Ini1,YY1,CCNT2	Name=66	NA	rs500079	0.34	0.34	0.33	0.358626	0.2813	0.1984	0.2896	0.5832	0.3487	0.28	0.24	0.29	0.58	0.3005	0.58	1	T	0.0	B	0.0	B	0.227	N	1.000	P	-1.81	N	2.11	T	-0.924	T	0.000	T	0.019	-1.313	0.035	2.81	0.355	1.174	7.697	-1.312913	NA	1	0.28716	0.524739	NA	0.319	NA	12.4643734
409	11	56510623	56510623	A	G	exonic	OR9G4	NA	nonsynonymous SNV	OR9G4:NM_001005284:exon1:c.T665C:p.V222A	exonic	ENSG00000172457	NA	nonsynonymous SNV	ENSG00000172457:ENST00000302957:exon1:c.T665C:p.V222A	Score=272;Name=lod=17	NA	11q12.1	NA	NA	NA	NA	rs513873	0.2	0.2	0.22	0.188698	0.2992	0.0853	0.1599	0.2163	0.1646	0.31	0.08	0.15	0.23	0.2537	0.32	0.45	T	0.999	D	0.994	D	0.003	N	0.554	P	1.07	L	1.16	T	-0.992	T	0.000	T	0.191	2.453	14.16	5.07	2.131	3.072	13.822	2.452759	2.452759	0.41	0.319483	0.238982	NA	0.145	NA	12.4609504
409	11	125617610	125617610	A	G	exonic	PATE1	NA	nonsynonymous SNV	PATE1:NM_138294:exon4:c.A140G:p.Q47R	exonic	ENSG00000171053	NA	nonsynonymous SNV	ENSG00000171053:ENST00000437148:exon3:c.A104G:p.Q35R,ENSG00000171053:ENST00000305738:exon4:c.A140G:p.Q47R	Score=333;Name=lod=30	NA	11q24.2	NA	NA	NA	NA	rs2114084	0.33	0.33	0.333	0.33746	0.2893	0.4375	0.2219	0.3797	0.3088	0.28	0.39	0.27	0.39	0.2967	0.39	0.25	T	0.998	D	0.929	D	0.060	N	0.957	P	1.245	L	1.37	T	-0.934	T	0.000	T	0.294	1.149	9.678	4.19	2.115	1.778	9.922	1.148572	NA	0.32	0.288439	0.377328	NA	0.261	NA	12.4588944
410	17	67081830	67081830	T	C	exonic	ABCA6	NA	nonsynonymous SNV	ABCA6:NM_080284:exon31:c.A3965G:p.N1322S	exonic	ENSG00000154262	NA	nonsynonymous SNV	ENSG00000154262:ENST00000284425:exon31:c.A3965G:p.N1322S	Score=512;Name=lod=161	NA	17q24.2	Score=822;Name=V$ROAZ_01	NA	NA	NA	rs2302134	0.45	0.45	0.41	0.459864	0.6481	0.375	0.6729	0.1619	0.6053	0.65	0.32	0.63	0.17	0.5867	0.65	0	D	0.841	P	0.45	P	0.313	N	0.000	P	2.64	M	-3.59	D	-1.011	T	0.000	T	0.064	3.008	16.03	1.13	0.059	2.103	8.291	3.008083	3.008083	NA	0.646628	0.256922	NA	0.377	NA	12.4519054
410	6	29694680	29694680	A	C	exonic	HLA-F	NA	nonsynonymous SNV	HLA-F:NM_001098479:exon7:c.A1057C:p.N353H	exonic	ENSG00000204642	NA	nonsynonymous SNV	ENSG00000204642:ENST00000440587:exon6:c.A670C:p.N224H,ENSG00000204642:ENST00000259951:exon7:c.A1057C:p.N353H	Score=737;Name=lod=1318	NA	6p22.1	NA	Name=Pol2-4H8	NA	NA	rs3734814	0.18	0.18	0.156	0.230831	0.1183	0.2917	0.1628	0.2632	0.2883	0.11	0.27	0.14	0.22	0.1778	0.27	0	D	0.982	D	0.712	P	.	.	0.000	P	1.525	L	5.82	T	-0.785	T	0.002	T	0.034	0.143	4.769	0.62	0.488	4.474	5.455	0.142916	NA	0	0.087328	0.164531	NA	NA	NA	12.4499054
410	6	29694681	29694681	A	T	exonic	HLA-F	NA	nonsynonymous SNV	HLA-F:NM_001098479:exon7:c.A1058T:p.N353I	exonic	ENSG00000204642	NA	nonsynonymous SNV	ENSG00000204642:ENST00000440587:exon6:c.A671T:p.N224I,ENSG00000204642:ENST00000259951:exon7:c.A1058T:p.N353I	Score=737;Name=lod=1318	NA	6p22.1	NA	Name=Pol2-4H8	NA	NA	rs3734815	0.18	0.18	0.16	0.230831	0.1183	0.2917	0.1628	0.2632	0.2883	0.11	0.27	0.14	0.23	0.1778	0.27	0	D	0.982	D	0.844	P	.	.	0.000	P	1.525	L	5.82	T	-1.060	T	0.059	T	0.095	0.297	5.607	0.62	0.488	6.207	5.455	0.296758	NA	0	0.088848	0.16813	NA	NA	NA	12.4483854
410	1	1650845	1650845	G	A	exonic	CDK11A,CDK11B	NA	nonsynonymous SNV	CDK11A:NM_024011:exon4:c.C277T:p.R93W,CDK11B:NM_033486:exon4:c.C277T:p.R93W,CDK11B:NM_033492:exon4:c.C277T:p.R93W,CDK11B:NM_033493:exon4:c.C277T:p.R93W,CDK11A:NM_033529:exon4:c.C277T:p.R93W,CDK11B:NM_033488:exon5:c.C175T:p.R59W,CDK11B:NM_033489:exon5:c.C175T:p.R59W	exonic	ENSG00000008128	NA	nonsynonymous SNV	ENSG00000008128:ENST00000356200:exon3:c.C175T:p.R59W,ENSG00000008128:ENST00000509982:exon3:c.C277T:p.R93W,ENSG00000008128:ENST00000357760:exon4:c.C277T:p.R93W,ENSG00000008128:ENST00000358779:exon4:c.C277T:p.R93W,ENSG00000008128:ENST00000378633:exon4:c.C277T:p.R93W,ENSG00000008128:ENST00000378635:exon4:c.C277T:p.R93W,ENSG00000008128:ENST00000378638:exon4:c.C175T:p.R59W,ENSG00000008128:ENST00000404249:exon4:c.C277T:p.R93W,ENSG00000008128:ENST00000460465:exon4:c.C277T:p.R93W,ENSG00000008128:ENST00000479362:exon4:c.C277T:p.R93W	Score=624;Name=lod=456	NA	1p36.33	NA	NA	NA	NA	rs1059831	0.46	0.46	0.462	0.747404	0.9215	0.7788	0.879	0.4992	0.7781	0.49	0.47	0.48	0.4	0.4784	0.54	0.08	T	1.0	D	0.999	D	0.082	U	0.990	D	0.975	L	3.65	T	-0.768	T	0.000	T	0.574	3.297	17.08	5.3	2.462	6.450	17.983	3.297294	3.297294	0	0.487974	0.366227	NA	0.587	NA	12.4454594
411	1	228525008	228525008	G	A	exonic	OBSCN	NA	nonsynonymous SNV	OBSCN:NM_001098623:exon66:c.G16724A:p.R5575H,OBSCN:NM_052843:exon66:c.G16724A:p.R5575H,OBSCN:NM_001271223:exon77:c.G19595A:p.R6532H	exonic	ENSG00000154358	NA	nonsynonymous SNV	ENSG00000154358:ENST00000284548:exon66:c.G16724A:p.R5575H,ENSG00000154358:ENST00000366709:exon66:c.G8081A:p.R2694H,ENSG00000154358:ENST00000422127:exon66:c.G16724A:p.R5575H,ENSG00000154358:ENST00000366707:exon72:c.G9626A:p.R3209H,ENSG00000154358:ENST00000570156:exon77:c.G19595A:p.R6532H	Score=410;Name=lod=62	NA	1q42.13	Score=773;Name=V$P53_01	NA	NA	NA	rs3795809	0.09	0.09	0.078	0.0766773	0.1252	0.0556	0.1744	0.0189	0.0573	0.13	0.06	0.18	0.02	0.1335	0.18	0.15	T	0.545	P	0.049	B	0.001	N	0.022	P	1.39	L	1.31	T	-1.055	T	0.000	T	0.422	3.516	17.96	4.37	2.437	6.878	17.467	3.516358	3.516358	0.02	0.135591	0.035558	ID=COSM1339809,COSM1339808,COSM1339807;OCCURENCE=1(large_intestine)	0.101	NA	12.4390424
411	1	228402121	228402121	A	G	exonic	OBSCN	NA	nonsynonymous SNV	OBSCN:NM_001098623:exon4:c.A1505G:p.Q502R,OBSCN:NM_001271223:exon4:c.A1505G:p.Q502R,OBSCN:NM_052843:exon4:c.A1505G:p.Q502R	exonic	ENSG00000154358	NA	nonsynonymous SNV	ENSG00000154358:ENST00000284548:exon4:c.A1505G:p.Q502R,ENSG00000154358:ENST00000422127:exon4:c.A1505G:p.Q502R,ENSG00000154358:ENST00000570156:exon4:c.A1505G:p.Q502R	Score=452;Name=lod=92	NA	1q42.13	Score=942;Name=V$ZIC3_01	NA	Name=2	NA	rs1771487	0.7	0.7	0.707	0.719649	0.6362	0.8244	0.6427	0.6815	0.8037	0.63	0.83	0.62	0.71	0.6539	0.83	0.75	T	0.018	B	0.016	B	0.000	D	0.000	P	0.31	N	-1.0	T	-1.001	T	0.000	T	0.247	3.468	17.76	5.27	1.979	3.871	15.165	3.467805	3.467805	NA	0.606544	0.66319	NA	0.572	NA	12.4366894
411	6	32948426	32948426	C	T	exonic	BRD2	NA	synonymous SNV	BRD2:NM_001199456:exon12:c.C2196T:p.S732S,BRD2:NM_001113182:exon13:c.C2337T:p.S779S,BRD2:NM_001199455:exon13:c.C2442T:p.S814S,BRD2:NM_005104:exon13:c.C2337T:p.S779S	exonic	ENSG00000204256	NA	synonymous SNV	ENSG00000204256:ENST00000449085:exon12:c.C2196T:p.S732S,ENSG00000204256:ENST00000374825:exon13:c.C2337T:p.S779S,ENSG00000204256:ENST00000374831:exon13:c.C2337T:p.S779S,ENSG00000204256:ENST00000395287:exon13:c.C2442T:p.S814S,ENSG00000204256:ENST00000395289:exon14:c.C2442T:p.S814S,ENSG00000204256:ENST00000443797:exon14:c.C1977T:p.S659S	Score=538;Name=lod=205	NA	6p21.32	NA	Name=Pol2-4H8,Pol2	Name=12	NA	rs2071876	0.06	0.06	0.058	0.0605032	0.0805	0.0397	0.0591	0.028	0.1063	0.08	0.05	0.06	0.02	0.07	0.08	.	.	.	.	.	.	.	.	1.000	D	.	.	.	.	-0.885	T	0.162	T	.	1.406	10.64	4.34	0.871	3.126	11.739	1.405612	1.405612	NA	0.079734	0.034083	NA	0.051	NA	12.4364326
412	10	22839628	22839628	T	C	exonic	PIP4K2A	NA	nonsynonymous SNV	PIP4K2A:NM_005028:exon7:c.A752G:p.N251S	exonic	ENSG00000150867	NA	nonsynonymous SNV	ENSG00000150867:ENST00000604912:exon4:c.A290G:p.N97S,ENSG00000150867:ENST00000323883:exon5:c.A332G:p.N111S,ENSG00000150867:ENST00000376573:exon7:c.A752G:p.N251S,ENSG00000150867:ENST00000545335:exon7:c.A575G:p.N192S	Score=633;Name=lod=496	NA	10p12.2	Score=862;Name=V$FAC1_01	NA	NA	NA	rs2230469	0.26	0.26	0.256	0.21226	0.3131	0.3839	0.134	0.0696	0.18	0.33	0.41	0.12	0.08	0.2694	0.41	0.55	T	0.001	B	0.006	B	0.000	D	0.000	P	0.155	N	1.37	T	-0.924	T	0.000	T	0.088	1.132	9.613	6.07	2.330	5.912	16.628	1.131741	NA	0.71	0.318605	0.103542	NA	0.29	NA	12.4322284
412	20	43933021	43933021	G	T	exonic	MATN4	NA	nonsynonymous SNV	MATN4:NM_003833:exon3:c.C490A:p.R164S,MATN4:NM_030590:exon3:c.C490A:p.R164S,MATN4:NM_030592:exon3:c.C490A:p.R164S	exonic	ENSG00000124159	NA	nonsynonymous SNV	ENSG00000124159:ENST00000372754:exon2:c.C490A:p.R164S,ENSG00000124159:ENST00000372756:exon2:c.C490A:p.R164S,ENSG00000124159:ENST00000342716:exon3:c.C490A:p.R164S,ENSG00000124159:ENST00000353917:exon3:c.C490A:p.R164S,ENSG00000124159:ENST00000360607:exon3:c.C490A:p.R164S,ENSG00000124159:ENST00000537548:exon4:c.C490A:p.R164S	NA	NA	20q13.12	Score=785;Name=V$AHRARNT_02	NA	NA	NA	rs2072788	0.38	0.38	0.366	0.395767	0.2634	0.755	0.3444	0.1959	0.4683	0.26	0.73	0.34	0.18	0.3755	0.73	1	T	0.149	B	0.095	B	0.001	D	1.000	P	-0.73	N	-1.72	D	-0.947	T	0.000	T	0.217	-0.228	2.899	3.82	1.258	1.582	7.358	-0.228035	NA	1	0.268128	0.193616	NA	0.21	NA	12.4263054
413	11	48285906	48285906	C	T	exonic	OR4X1	NA	nonsynonymous SNV	OR4X1:NM_001004726:exon1:c.C494T:p.P165L	exonic	ENSG00000176567	NA	nonsynonymous SNV	ENSG00000176567:ENST00000320048:exon1:c.C494T:p.P165L	NA	NA	11p11.2	NA	NA	NA	NA	rs16905753	0.17	0.17	0.162	0.182708	0.1252	0.1627	0.1268	0.3185	0.1186	0.13	0.16	0.12	0.27	0.149	0.29	0	D	0.604	P	0.299	B	.	.	0.919	P	2.71	M	8.65	T	-0.932	T	0.000	T	0.301	3.117	16.41	4.28	2.404	3.311	14.773	3.116671	3.116671	0.01	0.134365	0.286461	ID=COSM147191;OCCURENCE=1(stomach)	0.181	NA	12.4247684
413	11	1780205	1780205	A	G	exonic	CTSD	NA	synonymous SNV	CTSD:NM_001909:exon4:c.T465C:p.T155T	exonic	ENSG00000117984,ENSG00000250644	NA	synonymous SNV	ENSG00000117984:ENST00000438213:exon3:c.T420C:p.T140T,ENSG00000117984:ENST00000236671:exon4:c.T465C:p.T155T,ENSG00000117984:ENST00000367196:exon4:c.T360C:p.T120T,ENSG00000117984:ENST00000433655:exon4:c.T465C:p.T155T	Score=503;Name=lod=147	NA	11p15.5	Score=814;Name=V$GRE_C	NA	NA	NA	rs11555039	0.07	0.07	0.078	0.076278	0.0795	0.0367	0.0605	0.0893	0.1074	0.08	0.03	0.07	0.1	0.0784	0.1	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.020	T	0.002	T	.	1.191	9.842	-6.7	-0.997	-3.061	7.640	1.191211	NA	NA	0.084206	0.099909	NA	0.058	CLINSIG=probable-non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000116856.2|RCV000124646.1;CLNDSDB=.|.;CLNDSDBID=.|.	12.4245606
413	11	68840160	68840160	A	G	exonic	TPCN2	NA	nonsynonymous SNV	TPCN2:NM_139075:exon12:c.A1127G:p.K376R	exonic	ENSG00000162341	NA	nonsynonymous SNV	ENSG00000162341:ENST00000294309:exon12:c.A1127G:p.K376R,ENSG00000162341:ENST00000542467:exon12:c.A1127G:p.K376R	NA	Name=Hair color	11q13.3	Score=909;Name=V$FOXO4_01,V$HFH3_01	Name=NRSF	NA	NA	rs3750965	0.26	0.26	0.256	0.290735	0.3032	0.2063	0.1945	0.2322	0.5123	0.31	0.24	0.23	0.21	0.2934	0.32	0.35	T	0.41	B	0.103	B	0.000	N	0.628	P	1.995	M	-4.16	D	-1.154	T	0.000	T	0.066	-0.818	0.628	2.61	0.327	0.272	6.529	-0.818239	NA	0.46	0.315557	0.245	ID=COSM1356592;OCCURENCE=1(large_intestine)	0.297	NA	12.4211764
414	7	89983808	89983808	T	G	exonic	GTPBP10	NA	nonsynonymous SNV	GTPBP10:NM_033107:exon3:c.T264G:p.C88W	exonic	ENSG00000105793	NA	nonsynonymous SNV	ENSG00000105793:ENST00000222511:exon3:c.T264G:p.C88W,ENSG00000105793:ENST00000380058:exon3:c.T264G:p.C88W,ENSG00000105793:ENST00000417207:exon3:c.T264G:p.C88W,ENSG00000105793:ENST00000426366:exon3:c.T237G:p.C79W,ENSG00000105793:ENST00000453512:exon3:c.T237G:p.C79W,ENSG00000105793:ENST00000450619:exon4:c.T315G:p.C105W	Score=481;Name=lod=120	NA	7q21.13	NA	NA	Name=2	NA	rs42663	0.82	0.82	0.818	0.80012	0.8161	0.8899	0.8012	0.7277	0.7883	0.82	0.88	0.8	0.77	0.8097	0.88	.	.	0.959	D	0.781	P	0.036	N	0.000	P	2.415	M	1.99	T	-1.097	T	0.000	T	0.238	2.594	14.63	3.22	0.974	1.544	5.858	2.594094	2.594094	0.1	0.794487	0.731276	NA	0.79	NA	12.4130464
414	22	50722134	50722134	T	C	exonic	PLXNB2	NA	nonsynonymous SNV	PLXNB2:NM_012401:exon15:c.A2467G:p.I823V	exonic	ENSG00000196576	NA	nonsynonymous SNV	ENSG00000196576:ENST00000359337:exon15:c.A2467G:p.I823V,ENSG00000196576:ENST00000449103:exon15:c.A2467G:p.I823V	Score=378;Name=lod=46	NA	22q13.33	NA	NA	NA	NA	rs11547731	0.63	0.63	0.65	0.654353	0.6392	0.5813	0.5548	0.7602	0.6728	0.64	0.53	0.59	0.76	0.6374	0.76	0.11	T	0.999	D	0.998	D	0.014	N	0.003	P	2.295	M	-0.09	T	-0.942	T	0.000	T	0.131	3.074	16.26	4.22	1.780	2.064	11.353	3.074368	3.074368	0	0.646389	0.761771	ID=COSM445170;OCCURENCE=1(breast)	0.558	NA	12.4103444
414	2	133542585	133542585	C	G	exonic	NCKAP5	NA	nonsynonymous SNV	NCKAP5:NM_207363:exon14:c.G1799C:p.S600T	exonic	ENSG00000176771	NA	nonsynonymous SNV	ENSG00000176771:ENST00000317721:exon12:c.G1799C:p.S600T,ENSG00000176771:ENST00000409261:exon14:c.G1799C:p.S600T	Score=472;Name=lod=110	NA	2q21.2	NA	NA	NA	NA	rs17325719	0.09	0.09	0.086	0.081869	0.1412	0.0526	0.1052	0.0582	0.0665	0.13	0.04	0.12	0.06	0.1242	0.16	0.01	D	0.882	P	0.367	B	0.026	U	0.000	P	0.895	L	0.97	T	-1.129	T	0.001	T	0.122	3.953	20.2	5.64	2.937	5.761	18.068	3.953142	3.953142	0.01	0.157971	0.076026	NA	0.145	NA	12.4099624
415	1	151733335	151733335	T	G	exonic	MRPL9	NA	nonsynonymous SNV	MRPL9:NM_031420:exon6:c.A629C:p.E210A	exonic	ENSG00000143436	NA	nonsynonymous SNV	ENSG00000143436:ENST00000368829:exon5:c.A527C:p.E176A,ENSG00000143436:ENST00000368830:exon6:c.A629C:p.E210A	Score=536;Name=lod=201	NA	1q21.3	NA	NA	NA	NA	rs8480	0.52	0.52	0.494	0.511981	0.4642	0.4365	0.5951	0.6936	0.3344	0.46	0.4	0.58	0.71	0.4899	0.71	0.16	T	0.968	D	0.581	P	0.003	N	0.014	P	2.135	M	1.41	T	-0.991	T	0.081	T	0.267	3.625	18.44	5.27	2.198	4.818	11.508	3.625299	3.625299	0.03	0.478023	0.630277	NA	0.464	NA	12.4012104
415	16	27472772	27472772	C	T	exonic	GTF3C1	NA	nonsynonymous SNV	GTF3C1:NM_001520:exon37:c.G6229A:p.E2077K	exonic	ENSG00000077235	NA	nonsynonymous SNV	ENSG00000077235:ENST00000356183:exon37:c.G6229A:p.E2077K,ENSG00000077235:ENST00000561623:exon37:c.G6154A:p.E2052K	NA	NA	16p12.1	NA	NA	NA	NA	rs2228248	0.09	0.09	0.067	0.0696885	0.16	0.001	0.1844	0.0098	0.047	0.16	NA	0.16	0.01	0.1214	0.16	0.02	D	0.948	P	0.311	B	0.011	N	1.000	P	1.95	M	1.79	T	-1.074	T	0.000	T	0.287	3.591	18.29	5.22	2.450	3.221	15.544	3.5905	3.5905	0.02	0.151047	0.038234	NA	0.036	NA	12.4008864
415	11	17409572	17409572	T	C	exonic	KCNJ11	NA	nonsynonymous SNV	KCNJ11:NM_000525:exon1:c.A67G:p.K23E	exonic	ENSG00000187486	NA	nonsynonymous SNV	ENSG00000187486:ENST00000339994:exon1:c.A67G:p.K23E	Score=410;Name=lod=62	Name=Type 2 diabetes	11p15.1	Score=820;Name=V$PPARG_03	NA	NA	NA	rs5219	0.73	0.73	0.738	0.737021	0.6471	0.6617	0.7075	0.9766	0.6043	0.66	0.62	0.7	0.97	0.6471	0.97	0.38	T	0.0	B	0.001	B	0.001	N	0.002	P	.	.	-2.18	D	-0.974	T	0.000	T	0.349	-0.32	2.478	4.3	0.810	2.065	8.471	-0.320351	NA	0.36	0.639413	0.930682	NA	0.775	CLINSIG=other|drug-response|non-pathogenic;CLNDBN=Diabetes_mellitus_type_2|Exercise_stress_response\x2c_impaired\x2c_association_with|Permanent_neonatal_diabetes_mellitus;CLNREVSTAT=single|single|single;CLNACC=RCV000009214.1|RCV000009215.1|RCV000020356.1;CLNDSDB=MedGen:OMIM:SNOMED_CT|.|GeneReviews:MedGen:OMIM:Orphanet:Orphanet;CLNDSDBID=C0011860:125853:44054006|.|NBK1447:C1833104:606176:ORPHA79134:ORPHA99885	12.3997204
415	10	96066341	96066341	A	G	exonic	PLCE1	NA	nonsynonymous SNV	PLCE1:NM_001165979:exon25:c.A4856G:p.H1619R,PLCE1:NM_016341:exon26:c.A5780G:p.H1927R	exonic	ENSG00000138193	NA	nonsynonymous SNV	ENSG00000138193:ENST00000371375:exon25:c.A4856G:p.H1619R,ENSG00000138193:ENST00000371380:exon25:c.A5780G:p.H1927R,ENSG00000138193:ENST00000371385:exon25:c.A4856G:p.H1619R,ENSG00000138193:ENST00000260766:exon26:c.A5780G:p.H1927R	Score=607;Name=lod=391	Name=Esophageal cancer	10q23.33	Score=909;Name=V$ISRE_01	NA	NA	NA	rs2274223	0.28	0.28	0.299	0.298522	0.338	0.2391	0.2133	0.3797	0.2699	0.32	0.19	0.22	0.35	0.2846	0.39	1	T	0.0	B	0.0	B	0.002	N	1.000	P	0.08	N	-0.31	T	-1.071	T	0.000	T	0.105	-0.14	3.314	5.43	1.456	3.020	14.426	-0.140122	NA	1	0.311122	0.334078	NA	0.297	NA	12.3996114
415	17	37884037	37884037	C	G	exonic	ERBB2	NA	nonsynonymous SNV	ERBB2:NM_004448:exon27:c.C3508G:p.P1170A,ERBB2:NM_001005862:exon30:c.C3418G:p.P1140A	exonic	ENSG00000141736	NA	nonsynonymous SNV	ENSG00000141736:ENST00000445658:exon21:c.C2680G:p.P894A,ENSG00000141736:ENST00000269571:exon27:c.C3508G:p.P1170A,ENSG00000141736:ENST00000540147:exon27:c.C3418G:p.P1140A,ENSG00000141736:ENST00000541774:exon27:c.C3463G:p.P1155A,ENSG00000141736:ENST00000406381:exon29:c.C3418G:p.P1140A,ENSG00000141736:ENST00000584601:exon31:c.C3418G:p.P1140A	Score=514;Name=lod=163	NA	17q12	NA	NA	NA	NA	rs1058808	0.49	0.49	0.486	0.452077	0.673	0.4018	0.4784	0.1921	0.6094	0.68	0.48	0.5	0.2	0.607	0.68	0.03	D	0.953	P	0.607	P	.	.	0.000	P	2.05	M	-0.81	T	-0.881	T	0.000	T	0.26	4.265	22.3	5.04	2.326	3.926	18.007	4.264979	4.264979	0.02	0.656512	0.234453	NA	0.486	NA	12.3968214
416	1	144916676	144916676	C	T	exonic	PDE4DIP	NA	stopgain	PDE4DIP:NM_001002811:exon9:c.G2168A:p.W723X,PDE4DIP:NM_001002812:exon13:c.G1679A:p.W560X,PDE4DIP:NM_001198834:exon13:c.G1679A:p.W560X,PDE4DIP:NM_014644:exon13:c.G1679A:p.W560X,PDE4DIP:NM_001198832:exon16:c.G1877A:p.W626X	exonic	ENSG00000178104	NA	stopgain	ENSG00000178104:ENST00000313431:exon9:c.G2168A:p.W723X,ENSG00000178104:ENST00000479408:exon9:c.G1040A:p.W347X,ENSG00000178104:ENST00000529945:exon9:c.G2168A:p.W723X,ENSG00000178104:ENST00000369349:exon13:c.G1679A:p.W560X,ENSG00000178104:ENST00000369351:exon13:c.G1679A:p.W560X,ENSG00000178104:ENST00000369354:exon13:c.G1679A:p.W560X,ENSG00000178104:ENST00000369356:exon13:c.G1679A:p.W560X,ENSG00000178104:ENST00000313382:exon16:c.G1877A:p.W626X,ENSG00000178104:ENST00000369359:exon16:c.G2090A:p.W697X,ENSG00000178104:ENST00000530740:exon16:c.G2090A:p.W697X	Score=602;Name=lod=374	NA	1q21.1	NA	NA	NA	NA	rs1698683	0.27	0.27	0.214	NA	NA	NA	NA	NA	NA	0.35	0.04	0.26	0.4	0.2947	0.4	0.16	T	.	.	.	.	.	.	1.000	D	.	.	.	.	.	.	.	.	.	7.266	38	5.83	2.932	4.323	18.033	7.265646	7.265646	0.05	0.311685	0.339764	NA	0.188	NA	12.393615
416	2	120438515	120438515	G	C	exonic	TMEM177	NA	nonsynonymous SNV	TMEM177:NM_001105198:exon2:c.G86C:p.G29A,TMEM177:NM_001105199:exon2:c.G86C:p.G29A,TMEM177:NM_030577:exon2:c.G86C:p.G29A	exonic	ENSG00000144120	NA	nonsynonymous SNV	ENSG00000144120:ENST00000272521:exon2:c.G86C:p.G29A,ENSG00000144120:ENST00000401466:exon2:c.G86C:p.G29A,ENSG00000144120:ENST00000409951:exon2:c.G86C:p.G29A,ENSG00000144120:ENST00000424086:exon2:c.G86C:p.G29A,ENSG00000144120:ENST00000445518:exon2:c.G86C:p.G29A	Score=412;Name=lod=63	NA	2q14.2	NA	NA	NA	NA	rs11684353	0.15	0.15	0.166	0.139976	0.1511	0.119	0.134	0.1589	0.1288	0.15	0.14	0.16	0.17	0.1408	0.17	0.81	T	0.518	P	0.147	B	0.000	D	0.028	P	0.805	L	2.11	T	-1.039	T	0.000	T	0.105	-0.307	2.536	3.95	2.509	3.461	9.915	-0.307404	NA	0.64	0.148605	0.172038	NA	0.13	NA	12.3928284
416	9	104449098	104449098	C	T	exonic	GRIN3A	NA	nonsynonymous SNV	GRIN3A:NM_133445:exon2:c.G1084A:p.V362M	exonic	ENSG00000198785	NA	nonsynonymous SNV	ENSG00000198785:ENST00000361820:exon2:c.G1084A:p.V362M	Score=612;Name=lod=410	NA	9q31.1	NA	NA	NA	NA	rs10989591	0.3	0.3	0.314	0.319688	0.326	0.1081	0.2824	0.5295	0.274	0.32	0.12	0.28	0.49	0.3033	0.49	0.12	T	0.429	B	0.438	B	0.000	D	0.000	P	1.67	L	-2.11	D	-1.048	T	0.000	T	0.204	4.104	21.1	5.83	2.763	4.796	20.137	4.103988	4.103988	0.03	0.314302	0.47458	NA	0.275	NA	12.3897314
416	2	28821613	28821613	C	T	exonic	PLB1	NA	synonymous SNV	PLB1:NM_001170585:exon34:c.C2427T:p.P809P,PLB1:NM_153021:exon35:c.C2460T:p.P820P	exonic	ENSG00000163803	NA	synonymous SNV	ENSG00000163803:ENST00000422425:exon34:c.C2427T:p.P809P,ENSG00000163803:ENST00000327757:exon35:c.C2460T:p.P820P	Score=457;Name=lod=96	NA	2p23.2	Score=844;Name=V$HNF4_01	NA	Name=2	NA	rs35746006	0.06	0.06	0.048	0.0373403	0.1034	NA	0.062	0.0061	0.0327	0.11	NA	0.09	0.01	0.0706	0.11	0.06	T	.	.	.	.	0.001	D	0.000	P	.	.	1.92	T	-1.077	T	0.001	T	.	0.441	6.397	-3.04	-0.131	-1.888	1.069	0.441408	NA	NA	0.106047	0.020427	ID=COSM1565603,COSM1565604;OCCURENCE=1(large_intestine)	0.007	NA	12.3866196
417	1	55136529	55136529	T	C	exonic	MROH7	NA	nonsynonymous SNV	MROH7:NM_001039464:exon7:c.T1526C:p.V509A	exonic	ENSG00000184313,ENSG00000271723	NA	nonsynonymous SNV	ENSG00000184313:ENST00000409996:exon5:c.T230C:p.V77A,ENSG00000184313:ENST00000438846:exon5:c.T1526C:p.V509A,ENSG00000184313:ENST00000454855:exon5:c.T80C:p.V27A,ENSG00000184313:ENST00000545244:exon5:c.T230C:p.V77A,ENSG00000184313:ENST00000413188:exon6:c.T1526C:p.V509A,ENSG00000184313:ENST00000422659:exon6:c.T1526C:p.V509A,ENSG00000184313:ENST00000339553:exon7:c.T1526C:p.V509A,ENSG00000184313:ENST00000395690:exon7:c.T1526C:p.V509A,ENSG00000271723:ENST00000414150:exon7:c.T1526C:p.V509A,ENSG00000184313:ENST00000421030:exon7:c.T1526C:p.V509A,ENSG00000184313:ENST00000440047:exon7:c.T1526C:p.V509A,ENSG00000271723:ENST00000606515:exon7:c.T1526C:p.V509A,ENSG00000271723:ENST00000425300:exon8:c.T1601C:p.V534A	Score=395;Name=lod=54	NA	1p32.3	NA	NA	NA	NA	rs480963	0.34	0.34	0.29	0.378994	0.2863	0.372	0.4669	0.267	0.5706	0.29	0.37	0.44	0.29	0.3769	0.44	0.15	T	0.999	D	0.962	D	0.010	N	0.000	P	1.79	L	3.42	T	-0.863	T	0.000	T	0.335	2.988	15.96	5.08	1.931	3.724	11.296	2.98755	2.98755	0.24	0.285226	0.263048	NA	0.268	NA	12.3849074
417	20	9288522	9288522	G	A	exonic	PLCB4	NA	nonsynonymous SNV	PLCB4:NM_000933:exon1:c.G61A:p.A21T,PLCB4:NM_182797:exon2:c.G61A:p.A21T,PLCB4:NM_001172646:exon3:c.G61A:p.A21T	exonic	ENSG00000101333	NA	nonsynonymous SNV	ENSG00000101333:ENST00000378493:exon1:c.G61A:p.A21T,ENSG00000101333:ENST00000378501:exon1:c.G61A:p.A21T,ENSG00000101333:ENST00000414679:exon1:c.G61A:p.A21T,ENSG00000101333:ENST00000278655:exon2:c.G61A:p.A21T,ENSG00000101333:ENST00000334005:exon3:c.G61A:p.A21T,ENSG00000101333:ENST00000378473:exon3:c.G61A:p.A21T,ENSG00000101333:ENST00000416836:exon3:c.G61A:p.A21T,ENSG00000101333:ENST00000441846:exon3:c.G61A:p.A21T,ENSG00000101333:ENST00000407043:exon4:c.G61A:p.A21T,ENSG00000101333:ENST00000437503:exon4:c.G61A:p.A21T	Score=621;Name=lod=446	NA	20p12.2	NA	NA	NA	NA	rs6077510	0.48	0.48	0.474	0.471446	0.6819	0.4692	0.5922	0.1203	0.6462	0.66	0.47	0.59	0.15	0.5965	0.67	1	T	0.993	D	0.956	D	0.000	D	0.000	P	1.185	L	0.96	T	-1.075	T	0.000	T	0.403	2.086	12.93	5.86	2.781	7.072	18.970	2.085975	2.085975	0.04	0.673144	0.211076	NA	0.507	NA	12.3817894
417	9	74332970	74332970	G	A	exonic	TMEM2	NA	nonsynonymous SNV	TMEM2:NM_001135820:exon12:c.C2104T:p.P702S,TMEM2:NM_013390:exon13:c.C2293T:p.P765S	exonic	ENSG00000135048	NA	nonsynonymous SNV	ENSG00000135048:ENST00000377066:exon12:c.C2104T:p.P702S,ENSG00000135048:ENST00000377044:exon13:c.C2293T:p.P765S	Score=510;Name=lod=157	NA	9q21.13	NA	NA	NA	NA	rs25692	0.12	0.12	0.082	0.112819	0.161	0.1458	0.1138	0.0068	0.1718	0.17	0.14	0.13	0.01	0.13	0.17	0.3	T	0.57	P	0.142	B	0.000	D	0.000	P	1.655	L	0.48	T	-1.119	T	0.001	T	0.232	2.79	15.29	5.47	2.577	7.250	19.393	2.789688	2.789688	0.36	0.164884	0.039038	NA	0.058	NA	12.3774494
418	10	72307101	72307101	C	T	exonic	PALD1	NA	nonsynonymous SNV	PALD1:NM_014431:exon18:c.C2161T:p.R721C	exonic	ENSG00000107719	NA	nonsynonymous SNV	ENSG00000107719:ENST00000263563:exon18:c.C2161T:p.R721C	Score=346;Name=lod=34	NA	10q22.1	NA	NA	NA	NA	rs3740447	0.21	0.21	0.168	0.204073	0.1481	0.5079	0.1686	0.0151	0.229	0.14	0.47	0.17	0.02	0.1687	0.47	0	D	0.997	D	0.857	P	0.054	N	0.002	P	2.215	M	1.85	T	-0.919	T	0.000	T	0.427	3.32	17.16	3.12	0.928	-0.056	6.620	3.319934	3.319934	0	0.141628	0.040626	NA	0.174	NA	12.3749054
418	21	38117308	38117308	C	A	exonic	SIM2	NA	nonsynonymous SNV	SIM2:NM_005069:exon10:c.C1447A:p.L483M,SIM2:NM_009586:exon10:c.C1447A:p.L483M	exonic	ENSG00000159263	NA	nonsynonymous SNV	ENSG00000159263:ENST00000290399:exon10:c.C1447A:p.L483M,ENSG00000159263:ENST00000430056:exon10:c.C1447A:p.L483M	Score=471;Name=lod=109	NA	21q22.13	NA	NA	Name=23	NA	rs2073601	0.17	0.17	0.158	0.171925	0.326	0.0427	0.1729	0.0514	0.3088	0.33	0.04	0.2	0.07	0.2778	0.36	0.22	T	0.998	D	0.983	D	0.000	N	0.733	P	1.845	L	1.21	T	-0.996	T	0.000	T	0.266	3.421	17.56	3.55	2.194	0.413	11.046	3.420969	3.420969	0.18	0.356047	0.095098	NA	0.094	NA	12.3734864
418	11	65386206	65386206	C	G	exonic	PCNXL3	NA	nonsynonymous SNV	PCNXL3:NM_032223:exon6:c.C1373G:p.S458C	exonic	ENSG00000197136	NA	nonsynonymous SNV	ENSG00000197136:ENST00000355703:exon6:c.C1373G:p.S458C	Score=512;Name=lod=161	NA	11q13.1	Score=871;Name=V$OLF1_01	NA	NA	NA	rs1193851	0.26	0.26	0.262	0.23742	0.336	0.1329	0.245	0.3336	0.1084	0.34	0.12	0.26	0.3	0.2804	0.35	0.02	D	0.983	D	0.431	B	0.002	N	0.995	P	0.345	N	5.38	T	-0.813	T	0.000	T	0.102	2.996	15.99	4.13	2.384	0.682	10.049	2.995718	2.995718	0.06	0.345459	0.329151	NA	0.239	NA	12.3714744
418	1	23847464	23847464	C	A	exonic	E2F2	NA	nonsynonymous SNV	E2F2:NM_004091:exon4:c.G678T:p.Q226H	exonic	ENSG00000007968	NA	nonsynonymous SNV	ENSG00000007968:ENST00000361729:exon4:c.G678T:p.Q226H	Score=472;Name=lod=111	NA	1p36.12	NA	NA	NA	NA	rs2075995	0.42	0.42	0.422	0.355232	0.5089	0.5992	0.4092	0.062	0.3037	0.52	0.64	0.38	0.07	0.4514	0.64	0.36	T	0.985	D	0.669	P	0.000	D	0.024	P	1.7	L	-2.0	D	-0.876	T	0.000	T	0.132	2.68	14.92	5.06	1.521	0.027	14.136	2.679578	2.679578	NA	0.502791	0.128007	NA	0.341	NA	12.3702424
418	6	32726803	32726803	C	T	exonic	HLA-DQB2	NA	nonsynonymous SNV	HLA-DQB2:NM_001198858:exon3:c.G470A:p.R157Q	exonic	ENSG00000232629	NA	nonsynonymous SNV	ENSG00000232629:ENST00000411527:exon3:c.G470A:p.R157Q,ENSG00000232629:ENST00000435145:exon3:c.G470A:p.R157Q,ENSG00000232629:ENST00000437316:exon3:c.G470A:p.R157Q	NA	Name=IgG glycosylation	6p21.32	Score=824;Name=V$HNF4_01	NA	NA	NA	rs1049110	NA	NA	0.489	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4656	0.65	0.02	D	0.666	P	0.057	B	0.527	N	1.000	P	2.1	M	4.19	T	-0.925	T	0.003	T	0.274	1.005	9.106	-2.23	-0.273	-0.503	4.658	1.005354	NA	0.09	NA	NA	NA	0.609	NA	12.3677334
419	16	81249927	81249927	C	T	exonic	PKD1L2	NA	nonsynonymous SNV	PKD1L2:NM_001076780:exon2:c.G386A:p.G129D	exonic	ENSG00000166473,ENSG00000269323	NA	nonsynonymous SNV	ENSG00000166473:ENST00000337114:exon2:c.G386A:p.G129D,ENSG00000269323:ENST00000599697:exon2:c.G386A:p.G129D	Score=340;Name=lod=32	NA	16q23.2	NA	NA	NA	NA	rs7185774	0.18	0.18	0.177	0.149361	0.3598	0.0089	0.2219	0.0598	0.1472	0.34	0.0035	0.29	0.06	0.2632	0.35	0.09	T	0.998	D	0.947	D	0.795	N	0.000	P	.	.	2.2	T	-1.003	T	0.000	T	0.495	3.316	17.15	5.09	2.391	3.983	18.583	3.316419	3.316419	0.02	0.345524	0.115904	NA	0.174	NA	12.3648094
419	12	89916811	89916811	C	T	exonic	GALNT4,POC1B-GALNT4	NA	nonsynonymous SNV	GALNT4:NM_003774:exon1:c.G1516A:p.V506I,POC1B-GALNT4:NM_001199781:exon3:c.G1507A:p.V503I,POC1B-GALNT4:NM_001199782:exon3:c.G1000A:p.V334I	exonic	ENSG00000257594,ENSG00000259075	NA	nonsynonymous SNV	ENSG00000257594:ENST00000529983:exon1:c.G1516A:p.V506I,ENSG00000259075:ENST00000413530:exon3:c.G1000A:p.V334I,ENSG00000259075:ENST00000548729:exon3:c.G1507A:p.V503I	Score=284;Name=lod=19	NA	12q21.33	Score=898;Name=V$CEBP_01	NA	NA	NA	rs2230283	0.24	0.24	0.23	0.205272	0.3529	0.1369	0.2435	0.1536	0.1667	0.36	0.15	0.23	0.18	0.2766	0.36	0.06	T	0.88	P	0.794	P	.	.	0.000	P	1.89	L	1.41	T	-1.066	T	0.000	T	0.181	4.431	23.6	5.93	2.814	7.429	19.338	4.430637	4.430637	0.07	0.342857	0.17863	ID=COSM1128449;OCCURENCE=1(prostate)	0.261	NA	12.3609764
419	3	125854409	125854409	T	C	exonic	ALDH1L1	NA	nonsynonymous SNV	ALDH1L1:NM_001270365:exon10:c.A1138G:p.S380G,ALDH1L1:NM_001270364:exon12:c.A1471G:p.S491G,ALDH1L1:NM_012190:exon12:c.A1441G:p.S481G	exonic	ENSG00000144908	NA	nonsynonymous SNV	ENSG00000144908:ENST00000452905:exon10:c.A1138G:p.S380G,ENSG00000144908:ENST00000273450:exon12:c.A1471G:p.S491G,ENSG00000144908:ENST00000393431:exon12:c.A1441G:p.S481G,ENSG00000144908:ENST00000393434:exon12:c.A1441G:p.S481G,ENSG00000144908:ENST00000472186:exon12:c.A1441G:p.S481G	Score=510;Name=lod=157	NA	3q21.3	NA	NA	NA	NA	rs2276724	0.18	0.18	0.155	0.154353	0.167	0.2381	0.1499	0.1346	0.0849	0.17	0.23	0.17	0.12	0.1428	0.23	0.01	D	0.494	P	0.392	B	0.007	N	0.000	P	1.83	L	2.96	T	-1.044	T	0.000	T	0.23	1.843	12.12	3.74	1.714	6.863	10.722	1.843443	1.843443	0.04	0.163256	0.130277	NA	0.087	NA	12.3602774
419	7	21628242	21628242	C	G	exonic	DNAH11	NA	nonsynonymous SNV	DNAH11:NM_001277115:exon11:c.C1961G:p.S654C	exonic	ENSG00000105877	NA	nonsynonymous SNV	ENSG00000105877:ENST00000328843:exon11:c.C1961G:p.S654C,ENSG00000105877:ENST00000409508:exon11:c.C1961G:p.S654C	Score=374;Name=lod=44	NA	7p15.3	NA	NA	NA	NA	rs62441683	0.09	0.09	0.082	0.0772764	0.1819	0.0308	0.1009	0.0038	0.1002	0.17	0.04	0.12	0.002	0.1251	0.17	0.07	T	0.958	D	0.67	P	0.104	N	0.876	P	.	.	0.42	T	-1.012	T	0.001	T	0.339	0.132	4.709	3.67	1.553	2.449	1.782	0.131783	NA	0.08	0.16764	0.027034	NA	0.203	NA	12.3586934
420	1	159175527	159175527	G	A	exonic	DARC	NA	nonsynonymous SNV	DARC:NM_001122951:exon1:c.G304A:p.A102T,DARC:NM_002036:exon2:c.G298A:p.A100T	exonic	ENSG00000213088	NA	nonsynonymous SNV	ENSG00000213088:ENST00000368121:exon1:c.G304A:p.A102T,ENSG00000213088:ENST00000368122:exon2:c.G298A:p.A100T,ENSG00000213088:ENST00000435307:exon2:c.G304A:p.A102T,ENSG00000213088:ENST00000537147:exon3:c.G298A:p.A100T	NA	Name=IgE levels	1q23.2	Score=741;Name=V$SEF1_C	NA	NA	NA	rs13962	0.08	0.08	0.074	0.0688898	0.1839	NA	0.0937	0.0045	0.091	0.18	NA	0.1	0.002	0.1267	0.18	0.12	T	0.968	D	0.763	P	0.173	U	1.000	P	1.15	L	1.66	T	-1.082	T	0.054	T	0.384	2.438	14.11	3.07	1.259	0.380	5.803	2.438188	2.438188	0.12	0.170581	0.031775	NA	0.029	NA	12.3521524
421	19	18329784	18329784	C	T	exonic	PDE4C	NA	nonsynonymous SNV	PDE4C:NM_001098818:exon9:c.G935A:p.R312Q,PDE4C:NM_001098819:exon9:c.G713A:p.R238Q,PDE4C:NM_000923:exon10:c.G1031A:p.R344Q	exonic	ENSG00000105650	NA	nonsynonymous SNV	ENSG00000105650:ENST00000539010:exon5:c.G338A:p.R113Q,ENSG00000105650:ENST00000262805:exon9:c.G935A:p.R312Q,ENSG00000105650:ENST00000447275:exon9:c.G713A:p.R238Q,ENSG00000105650:ENST00000594465:exon9:c.G1031A:p.R344Q,ENSG00000105650:ENST00000594617:exon10:c.G1031A:p.R344Q,ENSG00000105650:ENST00000355502:exon13:c.G1031A:p.R344Q	Score=487;Name=lod=127	NA	19p13.11	NA	NA	NA	NA	rs2229228	0.26	0.26	0.25	0.209864	0.3638	0.1032	0.2493	0.1989	0.1483	0.38	0.1	0.27	0.23	0.2894	0.38	0.01	D	0.98	D	0.436	B	0.000	N	0.681	P	3.045	M	-0.49	T	-1.084	T	0.000	T	0.051	2.909	15.69	2.33	0.284	1.092	7.446	2.909073	2.909073	0.01	0.33686	0.225828	ID=COSM148535;OCCURENCE=1(stomach)	0.181	NA	12.3432734
421	3	124369744	124369744	C	T	exonic	KALRN	NA	synonymous SNV	KALRN:NM_007064:exon5:c.C660T:p.N220N,KALRN:NM_001024660:exon38:c.C5751T:p.N1917N	exonic	ENSG00000160145	NA	synonymous SNV	ENSG00000160145:ENST00000459915:exon2:c.C27T:p.N9N,ENSG00000160145:ENST00000428018:exon4:c.C564T:p.N188N,ENSG00000160145:ENST00000454902:exon4:c.C564T:p.N188N,ENSG00000160145:ENST00000291478:exon5:c.C660T:p.N220N,ENSG00000160145:ENST00000393496:exon5:c.C774T:p.N258N,ENSG00000160145:ENST00000360013:exon38:c.C5751T:p.N1917N	Score=583;Name=lod=312	NA	3q21.2	NA	Name=ELF1_(SC-631),NFKB,BCL3,PAX5-N19,Oct-2,EBF1_(C-8),TCF12,BATF,EBF,POU2F2,SP1,PU.1,Egr-1,BCL11A,MEF2A,Pol2-4H8	Name=9	NA	rs12106716	0.09	0.09	0.088	0.0890575	0.1014	0.001	0.111	0.1339	0.091	0.09	NA	0.12	0.15	0.106	0.15	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.049	T	0.002	T	.	-0.496	1.724	3.96	1.250	2.823	12.888	-0.495982	NA	NA	0.12186	0.145937	NA	0.181	NA	12.3374066
421	6	136590698	136590698	C	T	exonic	BCLAF1	NA	nonsynonymous SNV	BCLAF1:NM_001077440:exon9:c.G2090A:p.R697H,BCLAF1:NM_001077441:exon9:c.G1577A:p.R526H,BCLAF1:NM_014739:exon9:c.G2096A:p.R699H	exonic	ENSG00000029363	NA	nonsynonymous SNV	ENSG00000029363:ENST00000392348:exon7:c.G2090A:p.R697H,ENSG00000029363:ENST00000353331:exon9:c.G2090A:p.R697H,ENSG00000029363:ENST00000527536:exon9:c.G2096A:p.R699H,ENSG00000029363:ENST00000527613:exon9:c.G2096A:p.R699H,ENSG00000029363:ENST00000527759:exon9:c.G2090A:p.R697H,ENSG00000029363:ENST00000529826:exon9:c.G2093A:p.R698H,ENSG00000029363:ENST00000530429:exon9:c.G2090A:p.R697H,ENSG00000029363:ENST00000530767:exon9:c.G1577A:p.R526H,ENSG00000029363:ENST00000531224:exon9:c.G2096A:p.R699H,ENSG00000029363:ENST00000532384:exon9:c.G2096A:p.R699H	Score=825;Name=lod=3015	NA	6q23.3	NA	NA	NA	NA	rs62431287	NA	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4978	NA	0.07	T	0.993	D	0.829	P	0.003	N	0.000	P	1.405	L	1.52	T	-1.074	T	0.074	T	0.8	2.042	12.78	5.01	2.496	4.959	12.089	2.042067	2.042067	0.01	NA	NA	ID=COSM1579171;OCCURENCE=1(breast)	NA	NA	12.3355334
422	3	183976103	183976103	C	T	exonic	ECE2	NA	nonsynonymous SNV	ECE2:NM_032331:exon3:c.C508T:p.R170W	exonic	ENSG00000145194	NA	nonsynonymous SNV	ENSG00000145194:ENST00000324557:exon3:c.C508T:p.R170W	Score=535;Name=lod=200	NA	3q27.1	NA	NA	NA	NA	rs11546878	0.11	0.11	0.107	0.0884585	0.1799	0.0694	0.1138	0.0061	0.1074	0.19	0.07	0.13	0.01	0.1451	0.19	0.18	T	0.996	D	0.649	P	.	.	0.000	P	.	.	-0.17	T	-1.073	T	0.000	T	0.16	3.227	16.82	3.1	1.325	2.415	3.725	3.227219	3.227219	0.02	0.174651	0.035406	NA	0.072	NA	12.3336824
422	3	48669454	48669454	G	C	exonic	SLC26A6	NA	nonsynonymous SNV	SLC26A6:NM_001040454:exon5:c.C546G:p.F182L,SLC26A6:NM_022911:exon6:c.C609G:p.F203L,SLC26A6:NM_134263:exon6:c.C609G:p.F203L,SLC26A6:NM_134426:exon6:c.C609G:p.F203L	exonic	ENSG00000225697	NA	nonsynonymous SNV	ENSG00000225697:ENST00000421649:exon2:c.C147G:p.F49L,ENSG00000225697:ENST00000444531:exon2:c.C117G:p.F39L,ENSG00000225697:ENST00000358747:exon5:c.C546G:p.F182L,ENSG00000225697:ENST00000426599:exon5:c.C505G:p.R169G,ENSG00000225697:ENST00000431739:exon5:c.C457G:p.R153G,ENSG00000225697:ENST00000455886:exon5:c.C505G:p.R169G,ENSG00000225697:ENST00000383733:exon6:c.C609G:p.F203L,ENSG00000225697:ENST00000395550:exon6:c.C609G:p.F203L,ENSG00000225697:ENST00000420764:exon6:c.C609G:p.F203L	Score=534;Name=lod=197	NA	3p21.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.1	T	0.36	B	0.119	B	.	.	1.000	D	0.395	N	-2.71	D	-0.432	T	0.508	D	0.203	2.937	15.79	-1.36	-0.230	-0.296	9.944	2.937282	2.937282	0.08	NA	NA	NA	NA	NA	12.3333334
422	5	79739010	79739010	A	G	exonic	ZFYVE16	NA	nonsynonymous SNV	ZFYVE16:NM_014733:exon5:c.A2488G:p.T830A,ZFYVE16:NM_001105251:exon6:c.A2488G:p.T830A	exonic	ENSG00000039319	NA	nonsynonymous SNV	ENSG00000039319:ENST00000509558:exon1:c.A40G:p.T14A,ENSG00000039319:ENST00000338008:exon5:c.A2488G:p.T830A,ENSG00000039319:ENST00000505560:exon6:c.A2488G:p.T830A,ENSG00000039319:ENST00000510158:exon6:c.A2488G:p.T830A	Score=422;Name=lod=69	NA	5q14.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.22	T	0.0	B	0.0	B	0.101	N	0.993	N	-1.01	N	1.23	T	-1.047	T	0.029	T	0.052	-0.917	0.403	3.54	1.322	2.711	6.840	-0.917387	NA	0.45	NA	NA	NA	NA	NA	12.3333334
422	19	48343000	48343000	G	A	exonic	CRX	NA	nonsynonymous SNV	CRX:NM_000554:exon4:c.G676A:p.V226M	exonic	ENSG00000105392	NA	nonsynonymous SNV	ENSG00000105392:ENST00000221996:exon4:c.G676A:p.V226M,ENSG00000105392:ENST00000539067:exon4:c.G676A:p.V226M	Score=450;Name=lod=90	NA	19q13.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.16	T	0.026	B	0.017	B	0.050	N	1.000	N	0.69	N	-2.03	D	-0.769	T	0.328	T	0.135	2.765	15.21	2.04	0.415	3.937	4.446	2.765373	2.765373	0.13	NA	NA	ID=COSM439884;OCCURENCE=1(breast)	NA	NA	12.3333334
422	19	37619496	37619496	G	C	exonic	ZNF420	NA	nonsynonymous SNV	ZNF420:NM_144689:exon5:c.G1603C:p.E535Q	exonic	ENSG00000197050	NA	nonsynonymous SNV	ENSG00000197050:ENST00000337995:exon5:c.G1603C:p.E535Q	NA	NA	19q13.12	NA	Name=KAP1,ZNF274,SETDB1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000008241	NA	.	.	0.821	P	0.57	P	.	.	1.000	N	1.275	L	3.19	T	-1.027	T	0.027	T	0.114	-0.695	0.987	2.01	0.980	0.447	9.288	-0.695326	NA	0.24	NA	NA	NA	NA	NA	12.3333252
422	10	131965213	131965213	A	G	exonic	GLRX3	NA	nonsynonymous SNV	GLRX3:NM_001199868:exon6:c.A682G:p.I228V,GLRX3:NM_006541:exon6:c.A682G:p.I228V	exonic	ENSG00000108010	NA	nonsynonymous SNV	ENSG00000108010:ENST00000331244:exon6:c.A682G:p.I228V,ENSG00000108010:ENST00000368644:exon6:c.A682G:p.I228V,ENSG00000108010:ENST00000481034:exon6:c.A682G:p.I228V	Score=549;Name=lod=227	NA	10q26.3	Score=827;Name=V$GR_Q6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000008284	NA	0.5	T	0.002	B	0.002	B	0.002	N	0.742	N	0.015	N	3.2	T	-0.975	T	0.011	T	0.111	-0.79	0.704	2.65	0.259	2.013	8.717	-0.789589	NA	0.74	NA	NA	NA	NA	NA	12.3333251
422	12	32490627	32490627	T	C	exonic	BICD1	NA	nonsynonymous SNV	BICD1:NM_001003398:exon7:c.T2447C:p.I816T,BICD1:NM_001714:exon7:c.T2447C:p.I816T	exonic	ENSG00000151746	NA	nonsynonymous SNV	ENSG00000151746:ENST00000281474:exon7:c.T2447C:p.I816T,ENSG00000151746:ENST00000395758:exon7:c.T2447C:p.I816T,ENSG00000151746:ENST00000548411:exon7:c.T2447C:p.I816T	Score=780;Name=lod=1975	NA	12p11.21	NA	NA	NA	NA	rs200867915	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00004119	NA	0.48	T	0.008	B	0.007	B	0.001	N	1.000	D	0	N	1.01	T	-1.071	T	0.052	T	0.462	-0.171	3.168	4.66	1.968	2.694	10.447	-0.170539	NA	0.83	NA	NA	NA	NA	NA	12.3332922
422	15	75131031	75131031	T	C	exonic	ULK3	NA	nonsynonymous SNV	ULK3:NM_001099436:exon10:c.A1055G:p.N352S	exonic	ENSG00000140474	NA	nonsynonymous SNV	ENSG00000140474:ENST00000440863:exon10:c.A1055G:p.N352S,ENSG00000140474:ENST00000568667:exon10:c.A1088G:p.N363S,ENSG00000140474:ENST00000569437:exon10:c.A1055G:p.N352S	Score=446;Name=lod=87	NA	15q24.1	Score=920;Name=V$HOXA3_01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00005975	NA	0.39	T	0.017	B	0.007	B	.	.	0.815	D	1.085	L	2.06	T	-1.034	T	0.033	T	0.073	2.008	12.67	1.63	0.022	2.325	5.607	2.008193	2.008193	0.23	NA	NA	ID=COSM1478352;OCCURENCE=1(breast)	NA	NA	12.3332736
422	20	33584521	33584521	G	A	exonic	MYH7B	NA	nonsynonymous SNV	MYH7B:NM_020884:exon30:c.G3352A:p.A1118T	exonic	ENSG00000078814	NA	nonsynonymous SNV	ENSG00000078814:ENST00000262873:exon28:c.G3352A:p.A1118T	NA	NA	20q11.22	NA	NA	Name=3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0003	NA	0.01	D	0.425	B	0.237	B	0.438	N	1.000	N	0.69	N	-1.66	D	-0.690	T	0.310	T	0.062	1.258	10.1	2.09	0.375	0.109	1.085	1.258267	1.258267	0.02	NA	NA	NA	NA	NA	12.3330334
422	10	105104826	105104826	C	T	exonic	PCGF6	NA	nonsynonymous SNV	PCGF6:NM_001011663:exon6:c.G737A:p.R246H	exonic	ENSG00000156374	NA	nonsynonymous SNV	ENSG00000156374:ENST00000369847:exon6:c.G737A:p.R246H	Score=629;Name=lod=480	NA	10q24.33	Score=842;Name=V$IRF7_01	NA	NA	NA	rs137910892	NA	NA	NA	0.000199681	NA	NA	NA	NA	0.001	NA	NA	NA	NA	0.0002	0.0006	0.47	T	0.002	B	0.001	B	0.001	N	1.000	D	0.59	N	1.38	T	-1.098	T	0.054	T	0.234	2.458	14.18	3.84	0.763	4.684	11.892	2.457667	2.457667	0.32	0.000581	0	NA	NA	NA	12.3325524
422	10	102738626	102738626	G	A	exonic	SEMA4G	NA	nonsynonymous SNV	SEMA4G:NM_001203244:exon7:c.G664A:p.V222I,SEMA4G:NM_017893:exon7:c.G664A:p.V222I	exonic	ENSG00000095539	NA	nonsynonymous SNV	ENSG00000095539:ENST00000210633:exon7:c.G664A:p.V222I,ENSG00000095539:ENST00000370250:exon7:c.G664A:p.V222I,ENSG00000095539:ENST00000517724:exon7:c.G664A:p.V222I,ENSG00000095539:ENST00000519649:exon8:c.G664A:p.V222I,ENSG00000095539:ENST00000521006:exon8:c.G664A:p.V222I	Score=440;Name=lod=82	NA	10q24.31	NA	NA	NA	NA	rs138710515	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0003	0.0006	0.38	T	0.208	B	0.052	B	0.000	N	1.000	D	1.015	L	2.83	T	-1.021	T	0.021	T	0.171	2.339	13.78	4.73	1.380	4.521	11.636	2.339296	2.339296	0.13	0.000581	0	NA	NA	NA	12.3324524
422	8	8749895	8749895	G	A	exonic	MFHAS1	NA	nonsynonymous SNV	MFHAS1:NM_004225:exon1:c.C674T:p.A225V	exonic	ENSG00000147324	NA	nonsynonymous SNV	ENSG00000147324:ENST00000276282:exon1:c.C674T:p.A225V	Score=452;Name=lod=92	NA	8p23.1	NA	Name=Pol2	Name=113	NA	rs140544252	0	0	NA	0.000199681	0.001	NA	NA	NA	NA	NA	NA	NA	NA	0.0003	0.0007	0.37	T	0.146	B	0.038	B	0.004	N	0.926	N	1.58	L	1.81	T	-1.046	T	0.050	T	0.187	0.541	6.931	3.45	0.573	3.018	9.058	0.541412	NA	0.79	0.000698	0	NA	NA	NA	12.3313354
422	10	46999019	46999019	G	A	exonic	GPRIN2	NA	nonsynonymous SNV	GPRIN2:NM_014696:exon3:c.G139A:p.V47M	exonic	ENSG00000204175	NA	nonsynonymous SNV	ENSG00000204175:ENST00000374314:exon1:c.G139A:p.V47M,ENSG00000204175:ENST00000374317:exon3:c.G139A:p.V47M	NA	NA	10q11.22	NA	NA	NA	NA	rs3127819	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.502	0.5	0.1	T	1.0	D	0.882	P	0.019	N	1.000	N	1.995	M	3.27	T	-1.062	T	0.000	T	0.374	3.977	20.4	5.43	2.723	2.595	15.109	3.977383	3.977383	0.15	NA	NA	ID=COSM1560779;OCCURENCE=1(large_intestine)	0.471	NA	12.3313334
422	12	108686280	108686280	G	A	exonic	CMKLR1	NA	nonsynonymous SNV	CMKLR1:NM_001142344:exon3:c.C460T:p.R154C,CMKLR1:NM_001142345:exon3:c.C460T:p.R154C,CMKLR1:NM_004072:exon3:c.C454T:p.R152C,CMKLR1:NM_001142343:exon4:c.C460T:p.R154C	exonic	ENSG00000174600	NA	nonsynonymous SNV	ENSG00000174600:ENST00000312143:exon3:c.C460T:p.R154C,ENSG00000174600:ENST00000397688:exon3:c.C454T:p.R152C,ENSG00000174600:ENST00000412676:exon3:c.C460T:p.R154C,ENSG00000174600:ENST00000552995:exon3:c.C454T:p.R152C,ENSG00000174600:ENST00000550402:exon4:c.C460T:p.R154C	NA	NA	12q23.3	NA	NA	NA	NA	rs146650378	0.0005	0.0005	0.001	0.000199681	0.001	NA	NA	NA	NA	0.0013	NA	NA	NA	0.0005	0.0013	0.01	D	0.947	P	0.567	P	0.007	N	0.998	N	1.91	M	0.95	T	-0.900	T	0.147	T	0.675	0.755	8	2.29	0.163	1.409	14.505	0.755197	NA	0.02	0.000588	0	NA	NA	NA	12.3312454
422	1	110882499	110882499	T	G	exonic	RBM15	NA	nonsynonymous SNV	RBM15:NM_001201545:exon1:c.T472G:p.S158A,RBM15:NM_022768:exon1:c.T472G:p.S158A	exonic	ENSG00000162775	NA	nonsynonymous SNV	ENSG00000162775:ENST00000369784:exon1:c.T472G:p.S158A,ENSG00000162775:ENST00000487146:exon1:c.T472G:p.S158A,ENSG00000162775:ENST00000602849:exon1:c.T472G:p.S158A	Score=435;Name=lod=78	NA	1p13.3	NA	Name=E2F6_(H-50),ELK4,Pol2,Egr-1,Sin3Ak-20,USF1_(SC-8983)	Name=72	NA	rs200933258	0.0014	0.0014	NA	0.000599042	0.002	NA	0.0014	NA	NA	0.0026	NA	0.0028	NA	0.0002	0.0028	0.59	T	0.039	B	0.013	B	0.001	N	0.969	N	-0.345	N	0.9	T	-0.959	T	0.014	T	0.17	0.918	8.735	2.79	0.954	0.908	6.709	0.917509	NA	0.78	NA	NA	NA	NA	NA	12.3311334
422	12	52962157	52962157	G	A	exonic	KRT74	NA	nonsynonymous SNV	KRT74:NM_175053:exon7:c.C1151T:p.T384M	exonic	ENSG00000170484	NA	nonsynonymous SNV	ENSG00000170484:ENST00000305620:exon7:c.C1151T:p.T384M,ENSG00000170484:ENST00000549343:exon8:c.C1193T:p.T398M	Score=371;Name=lod=43	NA	12q13.13	NA	NA	NA	NA	NA	NA	NA	NA	0.000599042	0.002	0.001	NA	NA	NA	NA	NA	NA	NA	0.0003	NA	0.05	D	0.926	P	0.507	P	0.004	N	1.000	N	1.415	L	-0.97	T	-0.249	T	0.563	D	0.108	2.385	13.93	1.3	0.137	0.560	10.230	2.385147	2.385147	0.1	NA	NA	ID=COSM124031;OCCURENCE=1(upper_aerodigestive_tract)	NA	NA	12.3310334
422	18	47463727	47463727	G	A	exonic	MYO5B	NA	nonsynonymous SNV	MYO5B:NM_001080467:exon15:c.C1793T:p.P598L	exonic	ENSG00000167306	NA	nonsynonymous SNV	ENSG00000167306:ENST00000285039:exon15:c.C1793T:p.P598L	NA	NA	18q21.1	NA	NA	NA	NA	rs75107667	0.01	0.01	0.008	0.0091853	NA	0.001	0.0029	0.0325	NA	NA	0.0035	0.0028	0.03	0.0023	0.03	0.08	T	0.002	B	0.014	B	0.531	N	0.824	D	0.435	N	-3.62	D	-0.408	T	0.460	T	0.031	1.509	11	4.39	1.229	3.859	12.897	1.509013	1.509013	0.14	0.00012	0.021378	NA	0.022	NA	12.3309134
422	7	45104131	45104131	G	A	exonic	CCM2	NA	nonsynonymous SNV	CCM2:NM_001167934:exon3:c.G184A:p.V62I,CCM2:NM_001029835:exon4:c.G421A:p.V141I,CCM2:NM_001167935:exon4:c.G358A:p.V120I,CCM2:NM_031443:exon4:c.G358A:p.V120I	exonic	ENSG00000136280	NA	nonsynonymous SNV	ENSG00000136280:ENST00000541586:exon3:c.G184A:p.V62I,ENSG00000136280:ENST00000258781:exon4:c.G358A:p.V120I,ENSG00000136280:ENST00000381112:exon4:c.G421A:p.V141I,ENSG00000136280:ENST00000474617:exon4:c.G340A:p.V114I,ENSG00000136280:ENST00000475551:exon4:c.G340A:p.V114I,ENSG00000136280:ENST00000488727:exon4:c.G358A:p.V120I,ENSG00000136280:ENST00000544363:exon4:c.G358A:p.V120I	Score=630;Name=lod=485	NA	7p13	Score=805;Name=V$ER_Q6	NA	NA	NA	rs11552377	0.12	0.12	0.117	0.108027	0.174	0.1091	0.1671	0.0166	0.1207	0.17	0.09	0.18	0.02	0.1461	0.18	0.47	T	0.699	P	0.099	B	0.001	N	0.162	P	0.83	L	0.93	T	-1.055	T	0.000	T	0.063	1.458	10.82	3.15	1.244	2.274	9.673	1.458249	1.458249	0.61	0.183953	0.039946	NA	0.051	NA	12.3292804
422	16	72831132	72831132	C	A	exonic	ZFHX3	NA	nonsynonymous SNV	ZFHX3:NM_001164766:exon8:c.G2707T:p.V903L,ZFHX3:NM_006885:exon9:c.G5449T:p.V1817L	exonic	ENSG00000140836	NA	nonsynonymous SNV	ENSG00000140836:ENST00000397992:exon8:c.G2707T:p.V903L,ENSG00000140836:ENST00000268489:exon9:c.G5449T:p.V1817L	Score=343;Name=lod=33	NA	16q22.2	NA	NA	NA	NA	rs148334947	0.0009	0.0009	0.002	0.000399361	0.002	NA	NA	NA	NA	0.0026	NA	NA	NA	0.0009	0.0026	0.71	T	0.002	B	0.002	B	0.000	D	0.798	N	0.345	N	-0.7	T	-0.966	T	0.172	T	0.167	0.787	8.149	6.03	2.854	2.503	15.258	0.786921	NA	NA	0.001512	0.000227	NA	NA	NA	12.3289214
422	12	39724052	39724052	A	G	exonic	KIF21A	NA	nonsynonymous SNV	KIF21A:NM_001173465:exon22:c.T3224C:p.V1075A,KIF21A:NM_017641:exon23:c.T3293C:p.V1098A,KIF21A:NM_001173464:exon24:c.T3332C:p.V1111A	exonic	ENSG00000139116	NA	nonsynonymous SNV	ENSG00000139116:ENST00000551066:exon4:c.T395C:p.V132A,ENSG00000139116:ENST00000541463:exon22:c.T3224C:p.V1075A,ENSG00000139116:ENST00000361961:exon23:c.T3293C:p.V1098A,ENSG00000139116:ENST00000361418:exon24:c.T3332C:p.V1111A	Score=623;Name=lod=454	NA	12q12	NA	NA	NA	NA	rs150294289	0.0027	0.0027	NA	0.00139776	0.004	NA	0.0043	NA	NA	0.01	NA	0.01	NA	0.0011	0.01	0.78	T	0.0	B	0.002	B	.	.	1.000	D	0	N	-0.38	T	-1.059	T	0.067	T	0.2	1.483	10.91	4.82	1.089	4.647	11.237	1.482908	1.482908	0.36	0.001628	0.000681	NA	NA	NA	12.3266054
422	17	5087054	5087054	T	G	exonic	ZNF594	NA	nonsynonymous SNV	ZNF594:NM_032530:exon2:c.A498C:p.Q166H	exonic	ENSG00000180626	NA	nonsynonymous SNV	ENSG00000180626:ENST00000399604:exon1:c.A498C:p.Q166H,ENSG00000180626:ENST00000575779:exon2:c.A498C:p.Q166H	Score=376;Name=lod=45	NA	17p13.2	NA	Name=ZNF274	NA	NA	rs59197486	0.02	0.02	0.026	0.0259585	NA	NA	0.0029	0.0968	NA	NA	NA	0.0028	0.09	0.0072	0.09	0.29	T	1.0	D	0.919	D	.	.	1.000	N	0.775	N	1.27	T	-1.079	T	0.005	T	0.199	-0.748	0.822	-1.34	-0.203	-5.229	7.134	-0.748155	NA	0.35	0.000238	0.071895	NA	0.043	NA	12.3258954
422	10	95931011	95931011	A	G	exonic	PLCE1	NA	nonsynonymous SNV	PLCE1:NM_001165979:exon3:c.A643G:p.I215V,PLCE1:NM_016341:exon4:c.A1567G:p.I523V	exonic	ENSG00000138193	NA	nonsynonymous SNV	ENSG00000138193:ENST00000371375:exon3:c.A643G:p.I215V,ENSG00000138193:ENST00000371380:exon3:c.A1567G:p.I523V,ENSG00000138193:ENST00000371385:exon3:c.A643G:p.I215V,ENSG00000138193:ENST00000260766:exon4:c.A1567G:p.I523V	Score=497;Name=lod=140	NA	10q23.33	Score=949;Name=V$CDPCR3HD_01	NA	NA	NA	rs61751494	NA	NA	NA	0.000798722	0.003	NA	0.0014	NA	NA	NA	NA	NA	NA	0.0016	0.0035	0.44	T	0.006	B	0.004	B	0.001	D	0.930	N	0.46	N	1.45	T	-1.047	T	0.038	T	0.089	0.552	6.986	5.71	2.172	0.905	5.729	0.55195	NA	0.15	0.003481	0.000249	NA	NA	NA	12.3252524
423	17	5462215	5462215	T	A	exonic	NLRP1	NA	nonsynonymous SNV	NLRP1:NM_001033053:exon4:c.A1801T:p.I601F,NLRP1:NM_014922:exon4:c.A1801T:p.I601F,NLRP1:NM_033004:exon4:c.A1801T:p.I601F,NLRP1:NM_033006:exon4:c.A1801T:p.I601F,NLRP1:NM_033007:exon4:c.A1801T:p.I601F	exonic	ENSG00000091592	NA	nonsynonymous SNV	ENSG00000091592:ENST00000262467:exon4:c.A1801T:p.I601F,ENSG00000091592:ENST00000345221:exon4:c.A1801T:p.I601F,ENSG00000091592:ENST00000354411:exon4:c.A1801T:p.I601F,ENSG00000091592:ENST00000544378:exon4:c.A1801T:p.I601F,ENSG00000091592:ENST00000571451:exon4:c.A1801T:p.I601F,ENSG00000091592:ENST00000572272:exon4:c.A1801T:p.I601F,ENSG00000091592:ENST00000577119:exon4:c.A1801T:p.I601F,ENSG00000091592:ENST00000269280:exon5:c.A1801T:p.I601F	NA	NA	17p13.2	NA	NA	NA	NA	rs73973843	0.02	0.02	0.024	0.0299521	NA	NA	0.0043	0.1112	NA	NA	NA	0.01	0.11	0.0081	0.11	0	D	0.997	D	0.967	D	0.135	N	1.000	P	2.145	M	-0.48	T	-0.771	T	0.017	T	0.605	2.679	14.92	2.13	0.841	-0.077	5.318	2.678747	2.678747	0.04	0.000465	0.078983	NA	0.072	NA	12.3247684
423	3	124456742	124456742	G	C	exonic	UMPS	NA	nonsynonymous SNV	UMPS:NM_000373:exon3:c.G638C:p.G213A	exonic	ENSG00000114491	NA	nonsynonymous SNV	ENSG00000114491:ENST00000413078:exon2:c.G104C:p.G35A,ENSG00000114491:ENST00000538242:exon2:c.G104C:p.G35A,ENSG00000114491:ENST00000232607:exon3:c.G638C:p.G213A,ENSG00000114491:ENST00000479719:exon3:c.G638C:p.G213A,ENSG00000114491:ENST00000536109:exon4:c.G362C:p.G121A	Score=259;Name=lod=15	NA	3q21.2	Score=856;Name=V$FOXJ2_02	NA	NA	NA	rs1801019	0.17	0.17	0.162	0.185903	0.1491	0.1677	0.2622	0.152	0.2342	0.14	0.19	0.24	0.15	0.1888	0.24	0.75	T	0.91	P	0.388	B	0.000	D	0.003	P	1.675	L	0.59	T	-1.035	T	0.000	T	0.176	-0.127	3.378	2.95	0.503	3.284	9.664	-0.126888	NA	0.16	0.17093	0.154562	NA	0.174	NA	12.3245034
423	17	2203175	2203175	C	G	exonic	SMG6	NA	nonsynonymous SNV	SMG6:NM_017575:exon2:c.G872C:p.R291P	exonic	ENSG00000070366	NA	nonsynonymous SNV	ENSG00000070366:ENST00000263073:exon2:c.G872C:p.R291P,ENSG00000070366:ENST00000544865:exon2:c.G779C:p.R260P	Score=346;Name=lod=34	NA	17p13.3	NA	NA	NA	NA	rs1885986	0.23	0.23	0.201	0.184704	0.3569	0.0893	0.4222	0.0318	0.1442	0.34	0.13	0.43	0.04	0.2929	0.43	0.06	T	0.998	D	0.921	D	0.004	N	0.000	P	0.895	L	2.89	T	-0.817	T	0.000	T	0.777	2.872	15.57	5.35	2.490	3.931	19.057	2.871802	2.871802	0	0.359419	0.072855	NA	0.232	NA	12.3241144
423	16	4033436	4033436	T	C	exonic	ADCY9	NA	nonsynonymous SNV	ADCY9:NM_001116:exon7:c.A2316G:p.I772M	exonic	ENSG00000162104	NA	nonsynonymous SNV	ENSG00000162104:ENST00000294016:exon7:c.A2316G:p.I772M	NA	NA	16p13.3	Score=786;Name=V$ER_Q6	Name=NRSF	NA	NA	rs2230739	0.28	0.28	0.275	0.260383	0.341	0.3819	0.2334	0.1172	0.2648	0.32	0.4	0.25	0.1	0.3572	0.4	0.45	T	0.001	B	0.001	B	0.086	N	1.000	P	0.205	N	-1.61	D	-1.058	T	0.000	T	0.12	0.514	6.786	-7.94	-1.914	-1.685	11.379	0.513906	NA	0.25	0.312558	0.147701	ID=COSM1162178;OCCURENCE=1(pancreas)	0.333	NA	12.3225754
423	20	31812206	31812206	A	G	exonic	BPIFA3	NA	nonsynonymous SNV	BPIFA3:NM_178466:exon3:c.A324G:p.I108M	exonic	ENSG00000131059	NA	nonsynonymous SNV	ENSG00000131059:ENST00000375454:exon3:c.A324G:p.I108M	Score=235;Name=lod=12	NA	20q11.21	Score=838;Name=V$HAND1E47_01	NA	NA	NA	rs112731808	0.03	0.03	0.023	0.0197684	0.004	0.0308	0.0072	0.0446	NA	0.01	0.03	0.01	0.06	0.0075	0.087	0.27	T	0.0	B	0.001	B	0.017	N	0.996	D	-0.975	N	3.52	T	-0.821	T	0.001	T	0.029	-2.099	0.006	3.41	0.804	1.446	7.016	-2.099179	NA	0.95	0.001512	0.042442	NA	0.058	NA	12.3203214
423	4	5620263	5620263	G	A	exonic	EVC2	NA	nonsynonymous SNV	EVC2:NM_001166136:exon15:c.C2408T:p.A803V,EVC2:NM_147127:exon15:c.C2648T:p.A883V	exonic	ENSG00000173040	NA	nonsynonymous SNV	ENSG00000173040:ENST00000310917:exon15:c.C2408T:p.A803V,ENSG00000173040:ENST00000344408:exon15:c.C2648T:p.A883V,ENSG00000173040:ENST00000344938:exon15:c.C2648T:p.A883V,ENSG00000173040:ENST00000475313:exon15:c.C2408T:p.A803V	NA	NA	4p16.2	NA	NA	NA	NA	rs140951974	0.0027	0.0027	NA	0.00179712	0.006	NA	0.0029	NA	0.001	0.01	NA	0.01	NA	0.004	0.01	0.21	T	0.97	D	0.265	B	0.000	D	1.000	N	0.695	N	-1.04	T	-0.822	T	0.168	T	0.311	2.833	15.44	4.37	2.488	1.943	9.876	2.832975	2.832975	0.05	0.003953	0.000227	NA	NA	NA	12.3193804
423	2	233243981	233243981	A	T	exonic	ALPP	NA	nonsynonymous SNV	ALPP:NM_001632:exon3:c.A265T:p.I89L	exonic	ENSG00000163283	NA	nonsynonymous SNV	ENSG00000163283:ENST00000392027:exon3:c.A265T:p.I89L	Score=317;Name=lod=26	NA	2q37.1	Score=683;Name=V$P53_01	Name=NRSF	NA	NA	rs13026692	0.37	0.37	0.327	0.388778	0.337	0.5377	0.4611	0.2496	0.4254	0.34	0.53	0.42	0.22	0.3619	0.53	0.02	D	0.0	B	0.001	B	0.002	N	1.000	P	-0.695	N	-3.79	D	-0.912	T	0.000	T	0.03	1.782	11.92	-0.159	-0.152	2.236	4.362	1.781661	1.781661	0	0.315581	0.268724	ID=COSM1162692;OCCURENCE=1(pancreas)	0.333	NA	12.3188524
423	17	5085637	5085637	G	A	exonic	ZNF594	NA	nonsynonymous SNV	ZNF594:NM_032530:exon2:c.C1915T:p.L639F	exonic	ENSG00000180626	NA	nonsynonymous SNV	ENSG00000180626:ENST00000399604:exon1:c.C1915T:p.L639F,ENSG00000180626:ENST00000575779:exon2:c.C1915T:p.L639F	NA	NA	17p13.2	NA	Name=SETDB1,KAP1	NA	NA	rs189770499	0.0023	0.0023	NA	0.00239617	0.004	NA	0.0029	NA	0.0061	0.004	NA	0.01	NA	0.0048	0.01	0.05	D	1.0	D	0.996	D	.	.	1.000	N	2.325	M	0.68	T	-0.924	T	0.180	T	0.123	1.264	10.12	-0.665	0.034	0.296	5.464	1.26438	1.26438	0.04	0.006534	0.001159	NA	NA	NA	12.3179994
423	10	119043458	119043458	T	G	exonic	PDZD8	NA	nonsynonymous SNV	PDZD8:NM_173791:exon5:c.A2786C:p.N929T	exonic	ENSG00000165650	NA	nonsynonymous SNV	ENSG00000165650:ENST00000334464:exon5:c.A2786C:p.N929T	NA	NA	10q25.3	Score=810;Name=V$PBX1_02	NA	NA	NA	rs140922572	0.0014	0.0014	0.001	0.000798722	0.004	NA	NA	NA	NA	0.004	NA	NA	NA	0.0052	0.0067	0.37	T	0.132	B	0.051	B	0.001	N	0.975	N	0.805	L	-2.03	D	-0.798	T	0.278	T	0.065	-0.23	2.889	3.17	1.011	2.484	8.570	-0.230091	NA	0.36	0.006744	0.00227	NA	NA	NA	12.3173894
424	4	8605860	8605860	C	A	exonic	CPZ	NA	nonsynonymous SNV	CPZ:NM_003652:exon3:c.C621A:p.D207E,CPZ:NM_001014447:exon4:c.C654A:p.D218E,CPZ:NM_001014448:exon4:c.C243A:p.D81E	exonic	ENSG00000109625	NA	nonsynonymous SNV	ENSG00000109625:ENST00000315782:exon3:c.C621A:p.D207E,ENSG00000109625:ENST00000360986:exon4:c.C654A:p.D218E,ENSG00000109625:ENST00000382480:exon4:c.C243A:p.D81E	Score=581;Name=lod=307	NA	4p16.1	NA	Name=E2F6_(H-50)	NA	NA	rs28421391	NA	NA	NA	0.00359425	0.0109	NA	0.0043	0.0008	0.0031	NA	NA	NA	NA	0.0113	NA	1	T	0.001	B	0.002	B	0.031	N	1.000	D	-2.56	N	3.38	T	-0.937	T	0.002	T	0.109	-0.153	3.251	-3.98	-0.863	-0.989	0.154	-0.153244	NA	1	NA	NA	ID=COSM1670900;OCCURENCE=1(kidney)	0.014	NA	12.3111334
424	2	148716428	148716428	T	C	exonic	ORC4	NA	nonsynonymous SNV	ORC4:NM_001190882:exon4:c.A11G:p.N4S,ORC4:NM_002552:exon5:c.A233G:p.N78S,ORC4:NM_181741:exon5:c.A233G:p.N78S,ORC4:NM_181742:exon5:c.A233G:p.N78S,ORC4:NM_001190879:exon6:c.A233G:p.N78S	exonic	ENSG00000115947	NA	nonsynonymous SNV	ENSG00000115947:ENST00000540442:exon4:c.A11G:p.N4S,ENSG00000115947:ENST00000264169:exon5:c.A233G:p.N78S,ENSG00000115947:ENST00000392857:exon5:c.A233G:p.N78S,ENSG00000115947:ENST00000392858:exon5:c.A233G:p.N78S,ENSG00000115947:ENST00000416719:exon5:c.A233G:p.N78S,ENSG00000115947:ENST00000440042:exon5:c.A233G:p.N78S,ENSG00000115947:ENST00000457954:exon6:c.A233G:p.N78S,ENSG00000115947:ENST00000535373:exon6:c.A233G:p.N78S	Score=556;Name=lod=243	Name=Urate levels	2q23.1	Score=851;Name=V$POU6F1_01	NA	NA	NA	rs2307394	0.39	0.39	0.362	0.355831	0.325	0.4762	0.4611	0.2859	0.2832	0.35	0.48	0.44	0.3	0.3865	0.48	0.46	T	0.082	B	0.033	B	0.028	N	0.000	P	0.935	L	0.45	T	-0.953	T	0.000	T	0.134	2.286	13.6	5.48	2.069	2.450	9.147	2.286415	2.286415	0.14	0.31285	0.30871	NA	0.471	NA	12.3089834
424	3	41877414	41877414	T	C	exonic	ULK4	NA	nonsynonymous SNV	ULK4:NM_017886:exon18:c.A1706G:p.K569R	exonic	ENSG00000168038	NA	nonsynonymous SNV	ENSG00000168038:ENST00000301831:exon18:c.A1706G:p.K569R	Score=586;Name=lod=322	Name=Blood pressure	3p22.1	NA	NA	NA	NA	rs3774372	0.18	0.18	0.167	0.172724	0.1849	0.1458	0.1369	0.1974	0.18	0.2	0.15	0.14	0.21	0.1714	0.22	0.57	T	0.78	P	0.288	B	0.000	U	0.000	P	1.01	L	-0.1	T	-1.069	T	0.000	T	0.298	2.4	13.98	5.48	2.204	4.095	14.100	2.400184	2.400184	0.34	0.168301	0.208833	NA	0.203	NA	12.3087324
424	19	15760883	15760883	G	A	exonic	CYP4F3	NA	nonsynonymous SNV	CYP4F3:NM_000896:exon7:c.G808A:p.V270I,CYP4F3:NM_001199208:exon7:c.G808A:p.V270I,CYP4F3:NM_001199209:exon7:c.G808A:p.V270I	exonic	ENSG00000186529	NA	nonsynonymous SNV	ENSG00000186529:ENST00000585846:exon6:c.G808A:p.V270I,ENSG00000186529:ENST00000221307:exon7:c.G808A:p.V270I,ENSG00000186529:ENST00000586182:exon7:c.G808A:p.V270I,ENSG00000186529:ENST00000591058:exon7:c.G808A:p.V270I	Score=295;Name=lod=21	NA	19p13.12	Score=933;Name=V$TCF11_01	NA	NA	NA	rs28371536	0.0032	0.0032	0.003	0.00299521	0.0099	NA	0.0043	NA	0.002	0.01	NA	NA	NA	0.0063	0.01	0.07	T	0.05	B	0.19	B	0.004	U	0.971	D	0.395	N	-0.34	T	-0.899	T	0.131	T	0.126	1.854	12.16	2.94	0.667	4.257	9.454	1.853745	1.853745	0.07	0.009302	0.001135	NA	NA	NA	12.3078314
425	1	12342990	12342990	G	A	exonic	VPS13D	NA	nonsynonymous SNV	VPS13D:NM_015378:exon21:c.G4831A:p.E1611K,VPS13D:NM_018156:exon21:c.G4831A:p.E1611K	exonic	ENSG00000048707	NA	nonsynonymous SNV	ENSG00000048707:ENST00000356315:exon21:c.G4831A:p.E1611K,ENSG00000048707:ENST00000358136:exon21:c.G4831A:p.E1611K	Score=349;Name=lod=35	NA	1p36.22	NA	NA	NA	NA	rs41279452	0.0041	0.0041	0.004	0.00219649	0.008	NA	0.0043	NA	NA	0.01	NA	0.01	NA	0.0092	0.012	0.33	T	0.4	B	0.121	B	0.004	N	1.000	D	0.345	N	0.59	T	-1.051	T	0.069	T	0.328	2.65	14.82	5.82	2.756	3.743	15.560	2.649755	2.649755	0.05	0.012209	0.00227	NA	0.007	NA	12.3039244
425	17	74075984	74075984	C	T	exonic	ZACN	NA	nonsynonymous SNV	ZACN:NM_180990:exon4:c.C283T:p.R95C	exonic	ENSG00000186919	NA	nonsynonymous SNV	ENSG00000186919:ENST00000334586:exon4:c.C283T:p.R95C,ENSG00000186919:ENST00000425015:exon4:c.C283T:p.R95C	NA	NA	17q25.1	NA	Name=FOSL2,CTCF,Pol2	Name=24	NA	rs113860382	0.0041	0.0041	0.005	0.00259585	0.0119	NA	0.0014	NA	NA	0.01	NA	NA	NA	0.0101	0.01	0	D	0.155	B	0.033	B	0.242	N	1.000	N	2.015	M	-1.6	D	-0.563	T	0.316	T	0.473	1.759	11.84	1.88	0.899	0.331	2.786	1.759335	1.759335	0.02	0.00814	0.001362	NA	NA	NA	12.3031934
425	19	53268990	53268990	C	G	exonic	ZNF600	NA	nonsynonymous SNV	ZNF600:NM_198457:exon3:c.G2019C:p.K673N	exonic	ENSG00000189190	NA	nonsynonymous SNV	ENSG00000189190:ENST00000338230:exon3:c.G2019C:p.K673N	NA	NA	19q13.41	NA	NA	NA	NA	rs117125329	0.0041	0.0041	0.002	0.00299521	0.0139	NA	0.0014	NA	NA	0.01	NA	NA	NA	0.0063	0.01	0	D	1.0	D	0.995	D	.	.	1.000	N	2.77	M	3.15	T	-1.094	T	0.046	T	0.034	1.549	11.13	0.575	0.072	-1.409	4.988	1.549407	1.549407	0	0.010116	0.00227	NA	NA	NA	12.3030174
425	14	64564680	64564680	G	A	exonic	SYNE2	NA	nonsynonymous SNV	SYNE2:NM_015180:exon62:c.G12122A:p.R4041H,SYNE2:NM_182914:exon62:c.G12122A:p.R4041H	exonic	ENSG00000054654	NA	nonsynonymous SNV	ENSG00000054654:ENST00000394768:exon10:c.G1277A:p.R426H,ENSG00000054654:ENST00000555002:exon13:c.G2024A:p.R675H,ENSG00000054654:ENST00000344113:exon62:c.G12122A:p.R4041H,ENSG00000054654:ENST00000358025:exon62:c.G12122A:p.R4041H,ENSG00000054654:ENST00000554584:exon62:c.G12221A:p.R4074H,ENSG00000054654:ENST00000357395:exon63:c.G1277A:p.R426H	NA	NA	14q23.2	NA	NA	NA	NA	rs17101661	0.01	0.01	0.008	0.0105831	0.004	NA	0.0086	0.031	0.002	0.01	NA	0.02	0.03	0.012	0.03	0.12	T	0.958	D	0.278	B	0.044	N	1.000	N	0.345	N	4.11	T	-0.942	T	0.029	T	0.096	2.11	13.01	-6.11	-1.796	-3.312	8.328	2.109711	2.109711	0.35	0.016163	0.023831	NA	0.007	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118505.2;CLNDSDB=.;CLNDSDBID=.	12.3011704
425	7	150747896	150747896	C	T	exonic	ASIC3	NA	nonsynonymous SNV	ASIC3:NM_004769:exon4:c.C865T:p.P289S,ASIC3:NM_020321:exon4:c.C865T:p.P289S,ASIC3:NM_020322:exon4:c.C865T:p.P289S	exonic	ENSG00000213199	NA	nonsynonymous SNV	ENSG00000213199:ENST00000297512:exon4:c.C865T:p.P289S,ENSG00000213199:ENST00000349064:exon4:c.C865T:p.P289S,ENSG00000213199:ENST00000357922:exon4:c.C865T:p.P289S,ENSG00000213199:ENST00000377904:exon4:c.C865T:p.P289S,ENSG00000213199:ENST00000468325:exon4:c.C865T:p.P289S	Score=363;Name=lod=40	NA	7q36.1	NA	NA	NA	NA	rs114024820	0.01	0.01	NA	0.00379393	0.0109	NA	0.0043	NA	0.0051	0.01	NA	0.01	NA	0.009	0.014	0.51	T	0.058	B	0.043	B	0.758	U	0.942	D	0.55	N	-0.07	T	-0.998	T	0.119	T	0.386	0.132	4.709	5.06	2.501	1.103	16.296	0.131841	NA	0.33	0.014422	0.001362	NA	0.007	NA	12.2990114
425	4	169362557	169362557	C	G	exonic	DDX60L	NA	nonsynonymous SNV	DDX60L:NM_001012967:exon10:c.G1225C:p.V409L	exonic	ENSG00000181381	NA	nonsynonymous SNV	ENSG00000181381:ENST00000505863:exon4:c.G409C:p.V137L,ENSG00000181381:ENST00000260184:exon10:c.G1225C:p.V409L,ENSG00000181381:ENST00000505890:exon10:c.G1225C:p.V409L,ENSG00000181381:ENST00000511577:exon10:c.G1225C:p.V409L	Score=251;Name=lod=14	NA	4q32.3	NA	NA	Name=22	NA	rs13151700	0.37	0.37	0.35	0.334265	0.3439	0.6141	0.5159	0.0469	0.2955	0.34	0.64	0.47	0.05	0.3579	0.64	0.74	T	0.378	B	0.065	B	0.121	U	0.999	P	2.015	M	2.86	T	-1.026	T	0.000	T	0.248	1.575	11.22	3.1	1.411	3.471	9.976	1.574833	1.574833	0.14	0.332598	0.095954	NA	0.29	NA	12.2989354
426	11	116693871	116693871	C	T	exonic	APOA4	NA	nonsynonymous SNV	APOA4:NM_000482:exon1:c.G37A:p.V13M	exonic	ENSG00000110244	NA	nonsynonymous SNV	ENSG00000110244:ENST00000357780:exon1:c.G37A:p.V13M	Score=477;Name=lod=116	NA	11q23.3	NA	NA	NA	NA	rs12721041	0.01	0.01	0.005	0.00299521	0.0129	NA	0.0014	NA	0.001	0.01	NA	0.01	NA	0.01	0.017	0.01	D	0.241	B	0.284	B	0.171	N	0.999	N	2.62	M	-1.07	T	-0.441	T	0.314	T	0.197	2.287	13.6	3.39	1.383	0.411	10.192	2.286795	2.286795	0.01	0.016775	0.002726	NA	NA	NA	12.2936584
426	2	179393859	179393859	A	G	exonic	TTN	NA	nonsynonymous SNV	TTN:NM_003319:exon188:c.T79424C:p.I26475T,TTN:NM_133432:exon189:c.T79799C:p.I26600T,TTN:NM_133437:exon189:c.T80000C:p.I26667T,TTN:NM_133378:exon309:c.T98915C:p.I32972T,TTN:NM_001256850:exon310:c.T101696C:p.I33899T,TTN:NM_001267550:exon360:c.T106619C:p.I35540T	exonic	ENSG00000155657	NA	nonsynonymous SNV	ENSG00000155657:ENST00000460472:exon188:c.T79424C:p.I26475T,ENSG00000155657:ENST00000342175:exon189:c.T80000C:p.I26667T,ENSG00000155657:ENST00000359218:exon189:c.T79799C:p.I26600T,ENSG00000155657:ENST00000342992:exon309:c.T98915C:p.I32972T,ENSG00000155657:ENST00000591111:exon310:c.T101696C:p.I33899T,ENSG00000155657:ENST00000589042:exon360:c.T106619C:p.I35540T	Score=391;Name=lod=52	NA	2q31.2	Score=823;Name=V$NFKB_Q6	NA	NA	NA	rs55880440	0.01	0.01	0.009	0.00459265	0.0109	NA	0.0144	NA	0.002	0.02	NA	0.02	NA	0.0142	0.02	0	D	0.0	B	0.0	B	.	.	1.000	N	0.55	N	0.13	T	-0.981	T	0.081	T	0.516	1.983	12.59	1.63	0.412	1.884	6.346	1.983058	1.983058	NA	0.017835	0.004137	NA	0.007	CLINSIG=other|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=mult|single;CLNACC=RCV000040979.3|RCV000126003.1;CLNDSDB=.|.;CLNDSDBID=.|.	12.2903984
426	12	125467158	125467158	C	T	exonic	DHX37	NA	nonsynonymous SNV	DHX37:NM_032656:exon3:c.G288A:p.M96I	exonic	ENSG00000150990	NA	nonsynonymous SNV	ENSG00000150990:ENST00000308736:exon3:c.G288A:p.M96I	Score=440;Name=lod=82	NA	12q24.31	NA	NA	NA	NA	rs11558556	0.37	0.37	0.371	0.374002	0.339	0.4147	0.2507	0.4123	0.4039	0.35	0.41	0.27	0.42	0.3608	0.45	0.05	D	0.0	B	0.0	B	0.001	D	0.000	P	1.265	L	2.89	T	-0.915	T	0.000	T	0.04	1.859	12.17	4.05	2.382	1.912	13.481	1.858647	1.858647	0.13	0.347093	0.392646	NA	0.348	NA	12.2864404
426	20	52573971	52573971	T	G	exonic	BCAS1	NA	nonsynonymous SNV	BCAS1:NM_003657:exon10:c.A1416C:p.Q472H	exonic	ENSG00000064787	NA	nonsynonymous SNV	ENSG00000064787:ENST00000395961:exon10:c.A1416C:p.Q472H	Score=387;Name=lod=50	NA	20q13.2	Score=785;Name=V$MIF1_01	NA	Name=77	NA	rs35575210	0.13	0.13	0.109	0.132188	0.1899	0.1429	0.1354	0.0265	0.2025	0.19	0.12	0.16	0.02	0.1658	0.19	.	.	0.496	P	0.178	B	.	.	0.000	P	1.795	L	2.01	T	-1.025	T	0.000	T	0.2	3.718	18.88	4.43	0.908	1.178	6.56	3.717957	3.717957	0.01	0.191279	0.046527	NA	0.094	NA	12.2863544
427	8	95541459	95541459	A	C	exonic	KIAA1429	NA	nonsynonymous SNV	KIAA1429:NM_015496:exon7:c.T719G:p.V240G,KIAA1429:NM_183009:exon7:c.T719G:p.V240G	exonic	ENSG00000164944	NA	nonsynonymous SNV	ENSG00000164944:ENST00000297591:exon7:c.T719G:p.V240G,ENSG00000164944:ENST00000421249:exon7:c.T719G:p.V240G,ENSG00000164944:ENST00000437199:exon7:c.T719G:p.V240G	Score=682;Name=lod=790	NA	8q22.1	NA	NA	NA	NA	rs76706433	0.01	0.01	0.007	0.0091853	0.0348	NA	0.0144	NA	0.001	0.02	NA	0.02	NA	0.0106	0.02	0.06	T	0.001	B	0.002	B	0.011	N	1.000	D	0.55	N	0.72	T	-1.082	T	0.045	T	0.204	2.16	13.18	5.23	2.098	3.497	11.147	2.15982	2.15982	0.34	0.014535	0.002724	NA	NA	NA	12.2733984
427	19	17922666	17922666	G	A	exonic	B3GNT3	NA	nonsynonymous SNV	B3GNT3:NM_014256:exon3:c.G854A:p.R285H	exonic	ENSG00000179913	NA	nonsynonymous SNV	ENSG00000179913:ENST00000318683:exon3:c.G854A:p.R285H,ENSG00000179913:ENST00000595387:exon3:c.G854A:p.R285H	Score=343;Name=lod=33	NA	19p13.11	Score=772;Name=V$PAX5_01	NA	NA	NA	rs77134098	0.02	0.02	0.013	0.0109824	0.0278	0.001	0.0173	0.0076	0.0041	0.03	0.0017	0.02	0.01	0.0144	0.033	0.27	T	0.026	B	0.016	B	0.006	N	0.887	D	1.69	L	0.96	T	-1.033	T	0.037	T	0.126	0.406	6.204	5.23	2.452	0.363	9.841	0.405851	NA	0.39	0.019651	0.014526	NA	0.022	NA	12.2714824
427	15	42032383	42032383	C	G	exonic	MGA	NA	nonsynonymous SNV	MGA:NM_001080541:exon14:c.C4567G:p.P1523A,MGA:NM_001164273:exon14:c.C4567G:p.P1523A	exonic	ENSG00000174197	NA	nonsynonymous SNV	ENSG00000174197:ENST00000566586:exon13:c.C4567G:p.P1523A,ENSG00000174197:ENST00000570161:exon13:c.C4567G:p.P1523A,ENSG00000174197:ENST00000219905:exon14:c.C4567G:p.P1523A,ENSG00000174197:ENST00000389936:exon14:c.C4567G:p.P1523A,ENSG00000174197:ENST00000545763:exon14:c.C4567G:p.P1523A	Score=528;Name=lod=187	NA	15q15.1	NA	NA	NA	NA	rs17677991	0.3	0.3	0.277	0.301318	0.3797	0.1875	0.4597	0.2141	0.3436	0.39	0.17	0.44	0.22	0.3371	0.44	0.02	D	0.942	P	0.573	P	0.006	N	0.312	P	0.55	N	-2.08	D	-1.140	T	0.000	T	0.345	1.52	11.03	4.22	0.919	1.448	8.768	1.520149	1.520149	0.04	0.345203	0.227296	NA	0.181	NA	12.2713304
427	20	4705274	4705274	C	T	exonic	PRND	NA	nonsynonymous SNV	PRND:NM_012409:exon2:c.C77T:p.T26M	exonic	ENSG00000171864	NA	nonsynonymous SNV	ENSG00000171864:ENST00000305817:exon2:c.C77T:p.T26M	NA	NA	20p13	NA	NA	NA	NA	rs41279424	0.01	0.01	0.006	0.00738818	0.0199	NA	0.0072	NA	0.0123	0.01	NA	0.01	NA	0.0202	0.022	0	D	0.088	B	0.016	B	0.000	D	1.000	N	0	N	1.97	T	-1.031	T	0.016	T	0.063	1.001	9.089	5.47	2.560	3.545	14.825	1.001333	NA	0	0.022209	0.005447	NA	NA	NA	12.2710244
427	9	91606812	91606812	G	A	exonic	C9orf47	NA	nonsynonymous SNV	C9orf47:NM_001001938:exon3:c.G518A:p.S173N,C9orf47:NM_001142413:exon3:c.G461A:p.S154N	exonic	ENSG00000186354	NA	nonsynonymous SNV	ENSG00000186354:ENST00000375850:exon2:c.G617A:p.S206N,ENSG00000186354:ENST00000334490:exon3:c.G518A:p.S173N,ENSG00000186354:ENST00000375851:exon3:c.G461A:p.S154N	NA	NA	9q22.1	NA	Name=HA-E2F1	Name=21	NA	rs34421923	0.01	0.01	0.009	0.00798722	0.0308	NA	0.0086	0.0008	0.002	0.03	NA	0.01	0.002	0.014	0.03	0	D	0.995	D	0.918	D	.	.	1.000	N	0	N	.	.	-1.095	T	0.031	T	0.041	1.722	11.72	1.95	0.776	-0.034	5.757	1.721699	1.721699	0.02	0.023372	0.002497	NA	0.007	NA	12.2651614
428	14	23861811	23861811	A	G	exonic	MYH6	NA	nonsynonymous SNV	MYH6:NM_002471:exon25:c.T3302C:p.V1101A	exonic	ENSG00000197616	NA	nonsynonymous SNV	ENSG00000197616:ENST00000356287:exon24:c.T3302C:p.V1101A,ENSG00000197616:ENST00000405093:exon25:c.T3302C:p.V1101A	Score=578;Name=lod=297	Name=Heart rate,Electrocardiographic traits	14q11.2	NA	NA	NA	NA	rs365990	0.36	0.36	0.372	0.3748	0.3489	0.1597	0.2925	0.6437	0.318	0.35	0.16	0.34	0.63	0.3461	0.63	1	T	0.0	B	0.0	B	.	.	1.000	P	-0.935	N	-0.95	T	-0.949	T	0.000	T	0.021	-0.194	3.06	4.69	1.118	2.250	9.475	-0.193522	NA	1	0.373721	0.615524	NA	0.391	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000037473.1;CLNDSDB=.;CLNDSDBID=.	12.2646124
428	14	69697289	69697289	G	A	exonic	EXD2	NA	nonsynonymous SNV	EXD2:NM_018199:exon3:c.G316A:p.D106N,EXD2:NM_001193361:exon4:c.G691A:p.D231N,EXD2:NM_001193363:exon4:c.G691A:p.D231N,EXD2:NM_001193360:exon5:c.G691A:p.D231N,EXD2:NM_001193362:exon5:c.G691A:p.D231N	exonic	ENSG00000081177	NA	nonsynonymous SNV	ENSG00000081177:ENST00000409675:exon3:c.G316A:p.D106N,ENSG00000081177:ENST00000449989:exon3:c.G316A:p.D106N,ENSG00000081177:ENST00000312994:exon4:c.G691A:p.D231N,ENSG00000081177:ENST00000409018:exon4:c.G691A:p.D231N,ENSG00000081177:ENST00000409242:exon4:c.G316A:p.D106N,ENSG00000081177:ENST00000409949:exon5:c.G316A:p.D106N,ENSG00000081177:ENST00000409014:exon6:c.G316A:p.D106N,ENSG00000081177:ENST00000413191:exon6:c.G316A:p.D106N	Score=592;Name=lod=341	NA	14q24.1	NA	NA	NA	NA	rs35010854	0.01	0.01	0.004	0.00798722	0.0229	NA	0.0086	0.0015	0.0092	0.02	NA	0.01	0.002	0.0195	0.029	0.11	T	0.346	B	0.166	B	0.000	N	1.000	D	1.7	L	-0.13	T	-0.868	T	0.089	T	0.021	5.215	33	4.44	1.359	4.444	14.038	5.215178	5.215178	0.01	0.029535	0.006355	NA	0.014	NA	12.2613984
429	11	309127	309127	A	G	exonic	IFITM2	NA	nonsynonymous SNV	IFITM2:NM_006435:exon2:c.A361G:p.I121V	exonic	ENSG00000185201	NA	nonsynonymous SNV	ENSG00000185201:ENST00000399817:exon2:c.A361G:p.I121V,ENSG00000185201:ENST00000602569:exon2:c.A301G:p.I101V,ENSG00000185201:ENST00000533141:exon3:c.A301G:p.I101V	NA	NA	11p15.5	NA	Name=Pol2	Name=7	NA	rs1059091	0.5	0.5	0.5	0.540535	0.332	0.6944	0.4553	0.5976	0.5798	0.34	0.69	0.44	0.58	0.4185	0.69	0.21	T	0.0	B	0.002	B	.	.	1.000	P	2.115	M	-2.15	D	-0.947	T	0.000	T	0.075	0.838	8.381	-3.77	-1.307	-0.264	4.320	0.837569	NA	0	0.329548	0.545631	NA	0.457	NA	12.2532854
429	4	57250285	57250285	T	C	exonic	AASDH	NA	nonsynonymous SNV	AASDH:NM_181806:exon2:c.A181G:p.I61V	exonic	ENSG00000157426	NA	nonsynonymous SNV	ENSG00000157426:ENST00000205214:exon2:c.A181G:p.I61V,ENSG00000157426:ENST00000451613:exon2:c.A181G:p.I61V,ENSG00000157426:ENST00000502617:exon2:c.A181G:p.I61V,ENSG00000157426:ENST00000503808:exon2:c.A181G:p.I61V,ENSG00000157426:ENST00000514745:exon2:c.A181G:p.I61V	Score=548;Name=lod=224	NA	4q12	Score=763;Name=V$STAT1_01	NA	NA	NA	rs34543011	0.07	0.07	0.064	0.0646965	0.0179	0.1905	0.0231	0.0129	0.0828	0.02	0.21	0.04	0.02	0.0422	0.21	0.8	T	0.068	B	0.088	B	0.000	N	0.000	P	0.295	N	3.92	T	-1.010	T	0.000	T	0.152	1.834	12.09	4.74	1.058	1.273	11.013	1.833908	1.833908	0.14	0.020814	0.013164	NA	0.058	NA	12.2524194
429	2	54135936	54135936	T	C	exonic	PSME4	NA	nonsynonymous SNV	PSME4:NM_014614:exon22:c.A2614G:p.I872V	exonic	ENSG00000068878	NA	nonsynonymous SNV	ENSG00000068878:ENST00000404125:exon22:c.A2614G:p.I872V	Score=583;Name=lod=312	NA	2p16.2	NA	NA	NA	NA	rs2302878	0.1	0.1	0.096	0.105232	0.0109	0.2163	0.0922	0.0923	0.1145	0.01	0.24	0.07	0.09	0.0613	0.24	0.11	T	0.001	B	0.002	B	0.000	D	0.000	P	0.55	N	-0.09	T	-1.110	T	0.000	T	0.05	1.497	10.95	4.79	2.263	3.818	7.493	1.496838	1.496838	0.17	0.01013	0.088783	NA	0.072	NA	12.2510034
429	2	80530062	80530062	T	C	exonic	LRRTM1	NA	nonsynonymous SNV	LRRTM1:NM_178839:exon2:c.A883G:p.I295V	exonic	ENSG00000162951	NA	nonsynonymous SNV	ENSG00000162951:ENST00000295057:exon2:c.A883G:p.I295V,ENSG00000162951:ENST00000409148:exon2:c.A883G:p.I295V,ENSG00000162951:ENST00000417012:exon2:c.A883G:p.I295V,ENSG00000162951:ENST00000433224:exon2:c.A883G:p.I295V	Score=750;Name=lod=1483	NA	2p12	Score=850;Name=V$RORA2_01	NA	NA	NA	rs76300062	0.03	0.03	0.022	0.0229633	0.0358	0.0397	0.0144	0.0061	0.0215	0.04	0.04	0.02	0.0041	0.0252	0.04	.	.	0.001	B	0.005	B	0.009	N	1.000	D	0.42	N	0.02	T	-1.055	T	0.024	T	0.04	-0.731	0.873	-8.12	-2.019	0.178	11.500	-0.731247	NA	0.4	0.022442	0.008398	NA	0.014	NA	12.2498914
430	12	53086645	53086645	G	A	exonic	KRT77	NA	nonsynonymous SNV	KRT77:NM_175078:exon6:c.C1100T:p.T367M	exonic	ENSG00000189182	NA	nonsynonymous SNV	ENSG00000189182:ENST00000341809:exon6:c.C1100T:p.T367M,ENSG00000189182:ENST00000537195:exon7:c.C401T:p.T134M	NA	NA	12q13.13	NA	NA	NA	NA	rs3782489	0.33	0.33	0.321	0.379393	0.3499	0.245	0.3703	0.4584	0.4479	0.36	0.22	0.33	0.43	0.3699	0.43	0.01	D	0.999	D	0.964	D	.	.	1.000	P	3.3	M	-1.64	D	-1.245	T	0.000	T	0.059	3.073	16.26	1.41	0.371	1.188	8.836	3.073422	3.073422	0	0.368883	0.420073	NA	0.384	NA	12.2446504
430	13	23928671	23928671	C	T	exonic	SACS	NA	nonsynonymous SNV	SACS:NM_014363:exon8:c.G2080A:p.A694T	exonic	ENSG00000151835	NA	nonsynonymous SNV	ENSG00000151835:ENST00000423156:exon1:c.G952A:p.A318T,ENSG00000151835:ENST00000382292:exon7:c.G2080A:p.A694T,ENSG00000151835:ENST00000382298:exon8:c.G2080A:p.A694T	Score=450;Name=lod=90	NA	13q12.12	NA	NA	NA	NA	rs17325713	0.01	0.01	0.011	0.0081869	0.0318	NA	0.0043	NA	0.0061	0.03	NA	0.01	NA	0.0233	0.037	0.67	T	0.003	B	0.012	B	0.000	D	1.000	N	0	N	2.3	T	-1.075	T	0.008	T	0.213	2.171	13.22	5.17	1.524	6.006	17.208	2.170806	2.170806	0.02	0.036977	0.003858	NA	0.058	NA	12.2412564
430	5	178555097	178555097	C	T	exonic	ADAMTS2	NA	nonsynonymous SNV	ADAMTS2:NM_014244:exon17:c.G2480A:p.R827Q	exonic	ENSG00000087116	NA	nonsynonymous SNV	ENSG00000087116:ENST00000251582:exon17:c.G2480A:p.R827Q	Score=336;Name=lod=31	NA	5q35.3	NA	NA	NA	NA	rs35445112	0.02	0.02	0.018	0.0113818	0.0348	NA	0.0288	0.0008	0.001	0.04	NA	0.03	NA	0.0253	0.04	0.27	T	0.038	B	0.013	B	0.004	N	0.998	D	1.7	L	0.68	T	-1.041	T	0.025	T	0.135	1.557	11.16	3.4	2.232	3.942	3.729	1.556824	1.556824	0.03	0.037674	0.006355	NA	0.022	NA	12.2355594
431	10	88719789	88719789	C	G	exonic	SNCG	NA	synonymous SNV	SNCG:NM_003087:exon3:c.C195G:p.A65A	exonic	ENSG00000173267	NA	nonsynonymous SNV	ENSG00000173267:ENST00000348795:exon3:c.C247G:p.R83G	NA	NA	10q23.2	NA	Name=HEY1	NA	NA	rs760113	0.21	0.21	0.219	0.230032	0.2346	0.0615	0.2262	0.2693	0.3487	0.24	0.07	0.27	0.27	0.2827	0.3	0	D	.	.	.	.	.	.	0.000	P	.	.	-2.41	D	-0.917	T	0.000	T	.	1.185	9.818	-8.16	-1.414	-1.896	1.049	1.184969	NA	0	0.248837	0.274172	NA	0.283	NA	12.233863
431	3	3887508	3887508	C	G	exonic	LRRN1	NA	nonsynonymous SNV	LRRN1:NM_020873:exon2:c.C1183G:p.L395V	exonic	ENSG00000175928	NA	nonsynonymous SNV	ENSG00000175928:ENST00000319331:exon2:c.C1183G:p.L395V	NA	NA	3p26.2	Score=895;Name=V$YY1_01	NA	NA	Score=184;Name=1515397.10_1_+_184	rs35362954	0.02	0.02	0.01	0.0139776	0.0398	NA	0.036	0.0008	0.0041	0.03	NA	0.04	0.002	0.0257	0.042	0.39	T	0.323	B	0.079	B	0.000	D	0.976	N	1.79	L	0.5	T	-1.061	T	0.037	T	0.189	1.171	9.763	-6.55	-0.996	-0.207	23.043	1.170701	NA	0.04	0.042209	0.007036	NA	0.014	NA	12.2256244
432	6	52343899	52343899	T	C	exonic	EFHC1	NA	nonsynonymous SNV	EFHC1:NM_018100:exon8:c.T1343C:p.M448T,EFHC1:NM_001172420:exon9:c.T1286C:p.M429T	exonic	ENSG00000096093	NA	nonsynonymous SNV	ENSG00000096093:ENST00000371068:exon8:c.T1343C:p.M448T,ENSG00000096093:ENST00000433625:exon8:c.T1070C:p.M357T,ENSG00000096093:ENST00000538167:exon8:c.T1286C:p.M429T	Score=523;Name=lod=178	NA	6p12.2	NA	NA	NA	NA	rs1266787	0.07	0.07	0.077	0.0722843	0.0408	NA	0.0317	0.2194	0.0092	0.04	NA	0.03	0.21	0.0389	0.21	1	T	0.063	B	0.034	B	0.000	N	0.026	P	-0.28	N	2.06	T	-0.949	T	0.007	T	0.184	0.988	9.035	3.56	1.066	2.699	9.492	0.988215	NA	0.35	0.029767	0.196096	NA	0.145	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116943.2;CLNDSDB=.;CLNDSDBID=.	12.2238664
432	2	69736561	69736561	A	G	exonic	AAK1	NA	nonsynonymous SNV	AAK1:NM_014911:exon14:c.T1808C:p.V603A	exonic	ENSG00000115977	NA	nonsynonymous SNV	ENSG00000115977:ENST00000406297:exon14:c.T1808C:p.V603A,ENSG00000115977:ENST00000409068:exon14:c.T1808C:p.V603A,ENSG00000115977:ENST00000409085:exon14:c.T1808C:p.V603A	Score=659;Name=lod=635	NA	2p13.3	NA	Name=MafF_(M8194)	NA	NA	rs56038532	0.02	0.02	0.015	0.0141773	0.0417	NA	0.0259	0.0015	0.0092	0.04	NA	0.04	NA	0.0245	0.043	0.57	T	0.001	B	0.001	B	0.120	N	0.750	N	-0.205	N	1.86	T	-1.033	T	0.006	T	0.054	1.52	11.03	4.6	2.179	2.356	3.879	1.519829	1.519829	0.22	0.043288	0.010576	NA	0.007	NA	12.2238454
432	9	215296	215296	A	G	exonic	C9orf66	NA	nonsynonymous SNV	C9orf66:NM_152569:exon1:c.T101C:p.V34A	exonic	ENSG00000183784	NA	nonsynonymous SNV	ENSG00000183784:ENST00000382387:exon1:c.T101C:p.V34A	NA	NA	9p24.3	NA	Name=TBP,CCNT2,ZNF263,CTCF,Pol2	Name=8	NA	rs73370597	0.02	0.02	0.023	0.0353435	0.0298	0.001	0.0418	0.0333	0.0746	0.02	NA	0.05	0.04	0.0426	0.05	0	D	0.08	B	0.032	B	.	.	1.000	N	0	N	2.13	T	-0.996	T	0.004	T	0.079	1.304	10.27	-5.9	-1.583	-0.752	1.803	1.304136	1.304136	NA	0.041182	0.031392	NA	0.036	NA	12.2197514
432	11	34910397	34910397	C	T	exonic	APIP	NA	nonsynonymous SNV	APIP:NM_015957:exon4:c.G227A:p.C76Y	exonic	ENSG00000149089	NA	nonsynonymous SNV	ENSG00000149089:ENST00000532428:exon2:c.G86A:p.C29Y,ENSG00000149089:ENST00000395787:exon4:c.G227A:p.C76Y,ENSG00000149089:ENST00000278359:exon5:c.G278A:p.C93Y	Score=592;Name=lod=338	NA	11p13	Score=933;Name=V$HFH3_01	NA	NA	NA	rs1977420	0.46	0.46	0.411	0.457468	0.3559	0.7371	0.4035	0.3056	0.5174	0.36	0.71	0.4	0.36	0.4042	0.71	0.31	T	0.012	B	0.036	B	0.000	D	0.000	P	1.085	L	2.03	T	-0.965	T	0.000	T	0.595	2.895	15.65	5.85	2.771	4.655	20.177	2.895387	2.895387	0.5	0.357376	0.30895	NA	0.493	NA	12.2158574
433	15	81665021	81665021	T	A	exonic	TMC3	NA	nonsynonymous SNV	TMC3:NM_001080532:exon2:c.A147T:p.Q49H	exonic	ENSG00000188869	NA	nonsynonymous SNV	ENSG00000188869:ENST00000359440:exon2:c.A147T:p.Q49H,ENSG00000188869:ENST00000558726:exon2:c.A147T:p.Q49H	Score=621;Name=lod=445	NA	15q25.1	Score=776;Name=V$PAX6_01	NA	Name=2	NA	rs76902501	0.05	0.05	0.053	0.0577077	0.0278	0.0694	0.0231	0.0923	0.0542	0.03	0.08	0.03	0.08	0.0496	0.08	0.01	D	0.898	P	0.553	P	0.002	N	0.069	P	1.75	L	-0.2	T	-0.937	T	0.015	T	0.075	3.338	17.23	1.45	0.046	0.464	1.050	3.337639	3.337639	0.01	0.041494	0.066684	NA	0.036	NA	12.2144394
433	5	127873094	127873094	G	A	exonic	FBN2	NA	nonsynonymous SNV	FBN2:NM_001999:exon1:c.C203T:p.A68V	exonic	ENSG00000138829	NA	nonsynonymous SNV	ENSG00000138829:ENST00000262464:exon1:c.C203T:p.A68V,ENSG00000138829:ENST00000502468:exon1:c.C203T:p.A68V,ENSG00000138829:ENST00000508989:exon1:c.C203T:p.A68V,ENSG00000138829:ENST00000508053:exon7:c.C203T:p.A68V	NA	NA	5q23.3	NA	NA	Name=70	NA	rs62390671	0.02	0.02	0.013	0.0147764	0.0417	NA	0.0187	0.0076	0.0092	0.04	NA	0.03	0.0041	0.0331	0.047	0.27	T	0.0	B	0.001	B	0.177	N	0.998	N	-0.69	N	-0.67	T	-0.942	T	0.064	T	0.044	2.411	14.02	2.94	1.155	1.937	7.027	2.411265	2.411265	0.05	0.046609	0.013895	NA	0.007	CLINSIG=other|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=mult|single;CLNACC=RCV000079963.3|RCV000125030.1;CLNDSDB=.|.;CLNDSDBID=.|.	12.2119244
434	6	31238910	31238910	T	G	exonic	HLA-C	NA	nonsynonymous SNV	HLA-C:NM_001243042:exon3:c.A559C:p.T187P,HLA-C:NM_002117:exon3:c.A559C:p.T187P	exonic	ENSG00000204525	NA	nonsynonymous SNV	ENSG00000204525:ENST00000376228:exon3:c.A559C:p.T187P,ENSG00000204525:ENST00000383329:exon3:c.A559C:p.T187P	NA	NA	6p21.33	NA	Name=Pol2-4H8	NA	NA	rs1050685	0.22	0.22	NA	0.378794	0.3141	0.3641	0.3761	0.413	0.4162	0.2	0.24	0.2	0.25	0.3163	0.25	0.11	T	0.213	B	0.577	P	0.000	U	1.000	N	2.585	M	5.7	T	-0.972	T	0.003	T	0.701	-0.28	2.661	-5.41	-4.140	-2.856	8.140	-0.27981	NA	0.07	NA	NA	NA	NA	NA	12.2029334
434	1	216051125	216051125	G	A	exonic	USH2A	NA	nonsynonymous SNV	USH2A:NM_206933:exon43:c.C8656T:p.L2886F	exonic	ENSG00000042781	NA	nonsynonymous SNV	ENSG00000042781:ENST00000307340:exon43:c.C8656T:p.L2886F,ENSG00000042781:ENST00000366943:exon43:c.C8656T:p.L2886F	Score=742;Name=lod=1377	NA	1q41	NA	NA	NA	NA	rs41277200	0.07	0.07	0.055	0.0776757	0.0457	0.1458	0.0576	0.0582	0.0808	0.04	0.12	0.05	0.06	0.052	0.12	0.25	T	0.0	B	0.0	B	0.000	N	0.000	P	-2.08	N	0.45	T	-1.096	T	0.001	T	0.091	0.68	7.636	5.9	1.063	6.926	12.131	0.679967	NA	NA	0.03814	0.062415	NA	0.051	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000041933.1;CLNDSDB=.;CLNDSDBID=.	12.1974934
434	9	18639300	18639300	G	A	exonic	ADAMTSL1	NA	nonsynonymous SNV	ADAMTSL1:NM_001040272:exon7:c.G725A:p.S242N,ADAMTSL1:NM_052866:exon7:c.G725A:p.S242N	exonic	ENSG00000178031	NA	nonsynonymous SNV	ENSG00000178031:ENST00000276935:exon7:c.G725A:p.S242N,ENSG00000178031:ENST00000327883:exon7:c.G725A:p.S242N,ENSG00000178031:ENST00000380548:exon7:c.G725A:p.S242N,ENSG00000178031:ENST00000380566:exon7:c.G725A:p.S242N	Score=669;Name=lod=695	NA	9p22.1	NA	NA	NA	NA	rs776755	0.06	0.06	0.059	0.0625	0.0497	NA	0.0432	0.174	0.0031	0.05	NA	0.04	0.16	0.0446	0.16	0.37	T	0.915	P	0.468	P	.	.	0.000	P	-0.015	N	0.58	T	-1.085	T	0.001	T	0.194	1.255	10.09	4.87	1.580	4.426	15.239	1.255422	1.255422	0.57	0.042219	0.161598	NA	0.058	NA	12.1968144
435	11	119185677	119185677	T	C	exonic	MCAM	NA	nonsynonymous SNV	MCAM:NM_006500:exon3:c.A266G:p.E89G	exonic	ENSG00000076706	NA	nonsynonymous SNV	ENSG00000076706:ENST00000264036:exon3:c.A266G:p.E89G	Score=439;Name=lod=81	NA	11q23.3	Score=856;Name=V$TST1_01	NA	NA	NA	rs34587557	0.02	0.02	0.013	0.0207668	0.0477	NA	0.049	NA	0.0225	0.04	NA	0.04	NA	0.0372	0.054	0.23	T	0.018	B	0.098	B	.	.	1.000	D	1.245	L	-0.14	T	-1.011	T	0.040	T	0.06	3.347	17.27	5.41	2.040	0.893	11.83	3.347132	3.347132	0.13	0.054133	0.008189	ID=COSM428543;OCCURENCE=1(breast)	0.072	NA	12.1943004
435	19	8183871	8183871	G	A	exonic	FBN3	NA	nonsynonymous SNV	FBN3:NM_032447:exon25:c.C3247T:p.R1083W	exonic	ENSG00000142449	NA	nonsynonymous SNV	ENSG00000142449:ENST00000270509:exon25:c.C3247T:p.R1083W,ENSG00000142449:ENST00000600128:exon26:c.C3247T:p.R1083W,ENSG00000142449:ENST00000601739:exon26:c.C3247T:p.R1083W	Score=437;Name=lod=80	NA	19p13.2	NA	NA	NA	NA	rs35579498	0.1	0.1	0.07	0.0798722	0.0388	0.1796	0.1988	0.0061	0.0348	0.04	0.22	0.15	0.01	0.0635	0.22	0	D	0.039	B	0.005	B	0.000	U	0.003	P	2.095	M	-3.03	D	-0.954	T	0.001	T	0.075	3.081	16.29	0.394	-0.036	2.788	6.274	3.080514	3.080514	0	0.038721	0.014526	NA	0.036	NA	12.1923124
436	1	183099560	183099560	G	A	exonic	LAMC1	NA	nonsynonymous SNV	LAMC1:NM_002293:exon19:c.G3362A:p.R1121Q	exonic	ENSG00000135862	NA	nonsynonymous SNV	ENSG00000135862:ENST00000258341:exon19:c.G3362A:p.R1121Q	Score=571;Name=lod=278	NA	1q25.3	NA	NA	NA	NA	rs20559	0.02	0.02	0.018	0.0155751	0.0467	NA	0.0144	0.0008	0.0204	0.05	NA	0.02	0.002	0.0419	0.063	0.6	T	0.014	B	0.002	B	0.005	N	0.998	D	0.885	L	1.98	T	-1.046	T	0.004	T	0.071	2.509	14.35	4.76	2.339	4.810	9.970	2.509314	2.509314	0.37	0.063023	0.013391	NA	0.08	NA	12.1817104
436	8	145007187	145007187	G	A	exonic	PLEC	NA	nonsynonymous SNV	PLEC:NM_201378:exon14:c.C1469T:p.A490V,PLEC:NM_201379:exon14:c.C1445T:p.A482V,PLEC:NM_201380:exon14:c.C1922T:p.A641V,PLEC:NM_201381:exon14:c.C1415T:p.A472V,PLEC:NM_201382:exon14:c.C1511T:p.A504V,PLEC:NM_201383:exon14:c.C1523T:p.A508V,PLEC:NM_201384:exon14:c.C1511T:p.A504V,PLEC:NM_000445:exon15:c.C1592T:p.A531V	exonic	ENSG00000178209	NA	nonsynonymous SNV	ENSG00000178209:ENST00000322810:exon14:c.C1922T:p.A641V,ENSG00000178209:ENST00000345136:exon14:c.C1511T:p.A504V,ENSG00000178209:ENST00000354589:exon14:c.C1511T:p.A504V,ENSG00000178209:ENST00000354958:exon14:c.C1445T:p.A482V,ENSG00000178209:ENST00000356346:exon14:c.C1469T:p.A490V,ENSG00000178209:ENST00000357649:exon14:c.C1523T:p.A508V,ENSG00000178209:ENST00000398774:exon14:c.C1415T:p.A472V,ENSG00000178209:ENST00000527096:exon14:c.C1580T:p.A527V,ENSG00000178209:ENST00000436759:exon15:c.C1592T:p.A531V,ENSG00000178209:ENST00000528025:exon16:c.C1643T:p.A548V	Score=378;Name=lod=46	NA	8q24.3	Score=759;Name=V$TCF11MAFG_01	NA	NA	NA	rs11136336	0.24	0.24	0.219	0.23143	0.4066	0.1399	0.2867	0.0605	0.3374	0.4	0.16	0.29	0.06	0.3669	0.4	0.12	T	0.0	B	0.0	B	0.028	U	1.000	P	-0.55	N	-1.03	T	-1.073	T	0.000	T	0.052	1.073	9.379	3.92	2.261	1.952	7.883	1.072611	NA	0.01	0.37909	0.10286	NA	0.283	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117955.2;CLNDSDB=.;CLNDSDBID=.	12.1807434
436	11	67288594	67288594	C	T	exonic	CABP2	NA	nonsynonymous SNV	CABP2:NM_016366:exon4:c.G281A:p.R94Q	exonic	ENSG00000167791	NA	nonsynonymous SNV	ENSG00000167791:ENST00000353903:exon3:c.G110A:p.R37Q,ENSG00000167791:ENST00000294288:exon4:c.G281A:p.R94Q	Score=621;Name=lod=447	NA	11q13.2	Score=777;Name=V$PAX5_02	NA	NA	NA	rs2276118	0.44	0.44	0.415	0.429712	0.5606	0.6558	0.3775	0.0303	0.6391	0.54	0.67	0.41	0.04	0.5289	0.67	0.02	D	0.771	P	0.204	B	0.000	D	0.113	P	0.495	N	-0.04	T	-0.958	T	0.000	T	0.051	1.034	9.221	3.61	1.256	0.618	6.202	1.033505	NA	0.19	0.567986	0.126818	NA	0.37	NA	12.1758474
437	19	1043103	1043103	G	A	exonic	ABCA7	NA	nonsynonymous SNV	ABCA7:NM_019112:exon8:c.G643A:p.G215S	exonic	ENSG00000064687	NA	nonsynonymous SNV	ENSG00000064687:ENST00000435683:exon2:c.G229A:p.G77S,ENSG00000064687:ENST00000433129:exon7:c.G643A:p.G215S,ENSG00000064687:ENST00000263094:exon8:c.G643A:p.G215S	NA	NA	19p13.3	NA	Name=Pol2	Name=14	NA	rs72973581	0.02	0.02	0.031	0.0197684	0.0547	NA	0.0202	0.0053	0.0235	0.05	NA	0.02	0.01	0.0432	0.062	0.44	T	0.048	B	0.005	B	.	.	1.000	N	1.29	L	-2.0	D	-0.949	T	0.061	T	0.045	0.262	5.418	-5.86	-1.248	0.841	5.684	0.26222	NA	0.4	0.062442	0.014766	NA	0.065	NA	12.1729914
437	2	85824251	85824251	T	C	exonic	RNF181	NA	nonsynonymous SNV	RNF181:NM_016494:exon4:c.T352C:p.Y118H	exonic	ENSG00000168894	NA	nonsynonymous SNV	ENSG00000168894:ENST00000306368:exon4:c.T352C:p.Y118H,ENSG00000168894:ENST00000441634:exon4:c.T352C:p.Y118H	Score=589;Name=lod=329	NA	2p11.2	Score=814;Name=V$HNF4_01	NA	NA	NA	rs6643	0.23	0.23	0.23	0.227436	0.0358	0.2966	0.0807	0.5189	0.0634	0.04	0.32	0.08	0.54	0.098	0.54	0.88	T	0.0	B	0.0	B	0.005	N	1.000	P	0.07	N	-0.24	T	-0.975	T	0.000	T	0.119	0.317	5.72	4.31	1.276	2.607	10.751	0.317352	NA	1	0.027093	0.437358	NA	0.261	NA	12.1724404
437	2	128394955	128394955	A	G	exonic	MYO7B	NA	nonsynonymous SNV	MYO7B:NM_001080527:exon47:c.A6314G:p.Q2105R	exonic	ENSG00000169994	NA	nonsynonymous SNV	ENSG00000169994:ENST00000409090:exon23:c.A2873G:p.Q958R,ENSG00000169994:ENST00000409816:exon46:c.A6314G:p.Q2105R,ENSG00000169994:ENST00000389524:exon47:c.A6317G:p.Q2106R,ENSG00000169994:ENST00000428314:exon47:c.A6314G:p.Q2105R	Score=243;Name=lod=13	NA	2q14.3	NA	NA	Name=5	NA	rs11686946	0.16	0.16	0.135	0.206669	0.1968	0.1865	0.1239	0.1135	0.4223	0.2	0.2	0.13	0.09	0.2828	0.2	0.19	T	0.546	P	0.115	B	0.359	N	0.425	P	1.67	L	-2.1	D	-1.096	T	0.001	T	0.088	2.406	14	2.65	0.819	6.232	8.260	2.406269	2.406269	0.08	0.186644	0.123932	ID=COSM330409,COSM330410;OCCURENCE=1(breast),1(haematopoietic_and_lymphoid_tissue)	0.123	NA	12.1670894
437	1	19612477	19612477	C	T	exonic	AKR7A3	NA	nonsynonymous SNV	AKR7A3:NM_012067:exon3:c.G412A:p.V138M	exonic	ENSG00000162482	NA	nonsynonymous SNV	ENSG00000162482:ENST00000361640:exon3:c.G412A:p.V138M	Score=489;Name=lod=130	NA	1p36.13	Score=825;Name=V$HMX1_01	NA	NA	NA	rs2231198	0.49	0.49	0.45	0.463259	0.3817	0.6905	0.5432	0.3646	0.3896	0.37	0.72	0.54	0.38	0.4239	0.72	0.15	T	0.375	B	0.057	B	0.001	N	0.988	P	2.61	M	1.91	T	-0.983	T	0.000	T	0.06	0.523	6.831	3.04	1.542	2.346	5.909	0.52256	NA	0.12	0.361628	0.366985	NA	0.435	NA	12.1661054
437	17	78079669	78079669	G	A	exonic	GAA	NA	nonsynonymous SNV	GAA:NM_000152:exon3:c.G668A:p.R223H,GAA:NM_001079804:exon3:c.G668A:p.R223H,GAA:NM_001079803:exon4:c.G668A:p.R223H	exonic	ENSG00000171298	NA	nonsynonymous SNV	ENSG00000171298:ENST00000302262:exon3:c.G668A:p.R223H,ENSG00000171298:ENST00000570803:exon3:c.G668A:p.R223H,ENSG00000171298:ENST00000390015:exon4:c.G668A:p.R223H	NA	NA	17q25.3	NA	Name=E2F6_(H-50)	Name=43	NA	rs1042395	0.61	0.61	0.618	0.602436	0.7535	0.5437	0.5418	0.5212	0.6605	0.75	0.57	0.55	0.5	0.676	0.75	0.58	T	0.206	B	0.022	B	0.000	D	1.000	P	2.27	M	-2.0	D	-0.910	T	0.000	T	0.37	0.241	5.299	1.76	1.113	-0.044	10.855	0.240631	NA	0.29	0.73814	0.544051	NA	0.645	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000078185.2;CLNDSDB=.;CLNDSDBID=.	12.1656934
437	6	31239417	31239417	C	T	exonic	HLA-C	NA	nonsynonymous SNV	HLA-C:NM_001243042:exon2:c.G302A:p.S101N,HLA-C:NM_002117:exon2:c.G302A:p.S101N	exonic	ENSG00000204525	NA	nonsynonymous SNV	ENSG00000204525:ENST00000376228:exon2:c.G302A:p.S101N,ENSG00000204525:ENST00000376237:exon2:c.G302A:p.S101N,ENSG00000204525:ENST00000383329:exon2:c.G302A:p.S101N	NA	NA	6p21.33	Score=795;Name=V$ARP1_01	Name=NFKB,CTCF,RFX5_(N-494),Pol2,Pol2-4H8	Name=31	NA	rs2308557	0.36	0.36	0.353	0.38738	0.4125	0.1399	0.3862	0.5408	0.41	0.41	0.14	0.39	0.54	0.3785	0.54	0.75	T	0.0	B	0.003	B	0.082	U	1.000	P	-0.81	N	5.85	T	-0.939	T	0.000	T	0.416	0.495	6.683	-4.12	-0.960	-3.592	4.736	0.494653	NA	0.46	0.376707	0.535738	NA	0.167	NA	12.1656264
438	16	84256410	84256410	C	T	exonic	KCNG4	NA	nonsynonymous SNV	KCNG4:NM_172347:exon3:c.G973A:p.G325R	exonic	ENSG00000168418	NA	nonsynonymous SNV	ENSG00000168418:ENST00000308251:exon3:c.G973A:p.G325R	NA	NA	16q24.1	NA	NA	NA	NA	rs7196482	0.17	0.17	0.15	0.176717	0.2266	0.0506	0.1686	0.2156	0.2086	0.24	0.05	0.17	0.21	0.2206	0.28	0.01	D	0.976	D	0.672	P	0.004	N	1.000	P	2.285	M	-4.22	D	-0.880	T	0.002	T	0.059	0.795	8.185	-2.74	-0.433	-0.117	8.171	0.794792	NA	NA	0.223488	0.214091	NA	0.304	NA	12.1626454
438	6	31324064	31324064	T	A	exonic	HLA-B	NA	nonsynonymous SNV	HLA-B:NM_005514:exon3:c.A499T:p.T167S	exonic	ENSG00000234745	NA	nonsynonymous SNV	ENSG00000234745:ENST00000434333:exon2:c.A532T:p.T178S,ENSG00000234745:ENST00000412585:exon3:c.A499T:p.T167S	NA	NA	6p21.33	NA	Name=Pol2-4H8	Name=6	NA	rs1050367	0.08	0.08	0.04	0.0682907	0.0577	0.12	0.0576	0.0749	0.0245	0.06	0.12	0.05	0.07	0.065	0.12	0.01	D	0.001	B	0.005	B	0.144	U	1.000	P	2.78	M	5.52	T	-0.983	T	0.002	T	0.58	0.368	5.999	-0.943	-0.714	1.078	4.691	0.368207	NA	0.01	0.049443	0.05343	NA	0.007	NA	12.1611904
438	11	35201842	35201842	C	T	exonic	CD44	NA	synonymous SNV	CD44:NM_000610:exon3:c.C255T:p.H85H,CD44:NM_001001389:exon3:c.C255T:p.H85H,CD44:NM_001001390:exon3:c.C255T:p.H85H,CD44:NM_001001391:exon3:c.C255T:p.H85H,CD44:NM_001202555:exon3:c.C255T:p.H85H,CD44:NM_001202556:exon3:c.C255T:p.H85H,CD44:NM_001202557:exon3:c.C255T:p.H85H	exonic	ENSG00000026508	NA	synonymous SNV	ENSG00000026508:ENST00000279452:exon2:c.C135T:p.H45H,ENSG00000026508:ENST00000525211:exon2:c.C192T:p.H64H,ENSG00000026508:ENST00000526000:exon2:c.C189T:p.H63H,ENSG00000026508:ENST00000263398:exon3:c.C255T:p.H85H,ENSG00000026508:ENST00000352818:exon3:c.C255T:p.H85H,ENSG00000026508:ENST00000360158:exon3:c.C255T:p.H85H,ENSG00000026508:ENST00000415148:exon3:c.C255T:p.H85H,ENSG00000026508:ENST00000428726:exon3:c.C255T:p.H85H,ENSG00000026508:ENST00000433354:exon3:c.C255T:p.H85H,ENSG00000026508:ENST00000433892:exon3:c.C255T:p.H85H,ENSG00000026508:ENST00000434472:exon3:c.C255T:p.H85H,ENSG00000026508:ENST00000437706:exon3:c.C255T:p.H85H,ENSG00000026508:ENST00000449691:exon3:c.C255T:p.H85H,ENSG00000026508:ENST00000526669:exon3:c.C255T:p.H85H	NA	NA	11p13	Score=921;Name=V$MYCMAX_02	Name=Pol2-4H8	Name=3	NA	rs1071695	0.15	0.15	0.151	0.139377	0.173	0.0714	0.2205	0.149	0.1043	0.17	0.08	0.22	0.15	0.161	0.22	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.034	T	0.000	T	.	0.088	4.473	-8.16	-1.565	-3.037	17.435	0.087625	NA	NA	0.171824	0.161671	ID=COSM1353673;OCCURENCE=1(large_intestine)	0.116	NA	12.1608426
438	12	106460938	106460938	G	C	exonic	NUAK1	NA	nonsynonymous SNV	NUAK1:NM_014840:exon7:c.C1628G:p.P543R	exonic	ENSG00000074590	NA	nonsynonymous SNV	ENSG00000074590:ENST00000261402:exon7:c.C1628G:p.P543R	Score=346;Name=lod=34	NA	12q23.3	NA	NA	NA	NA	rs3741883	0.23	0.23	0.211	0.221446	0.2207	0.4177	0.2133	0.0408	0.2699	0.22	0.42	0.21	0.04	0.2248	0.42	0.32	T	0.93	P	0.383	B	0.000	D	0.029	P	0	N	-0.76	T	-0.996	T	0.000	T	0.1	1.139	9.64	5.53	2.596	3.525	12.754	1.138832	NA	0.02	0.228023	0.069451	ID=COSM147601,COSM147600;OCCURENCE=1(stomach)	0.101	NA	12.1598104
438	4	126241335	126241335	C	G	exonic	FAT4	NA	nonsynonymous SNV	FAT4:NM_024582:exon1:c.C3769G:p.Q1257E	exonic	ENSG00000196159	NA	nonsynonymous SNV	ENSG00000196159:ENST00000394329:exon1:c.C3769G:p.Q1257E	Score=495;Name=lod=137	NA	4q28.1	Score=732;Name=V$MEF2_04	NA	NA	NA	rs36052762	0.1	0.1	0.079	0.108626	0.0477	0.2014	0.1571	0.0234	0.1564	0.04	0.2	0.13	0.02	0.0852	0.2	0.34	T	0.054	B	0.08	B	0.005	U	0.000	P	0.84	L	5.33	T	-0.679	T	0.000	T	0.131	-0.083	3.596	3.89	2.503	3.553	15.618	-0.082671	NA	0.2	0.044358	0.025067	NA	0.08	NA	12.1560754
438	19	10402938	10402938	G	A	exonic	ICAM5	NA	nonsynonymous SNV	ICAM5:NM_003259:exon4:c.G901A:p.V301I	exonic	ENSG00000105376	NA	nonsynonymous SNV	ENSG00000105376:ENST00000221980:exon4:c.G901A:p.V301I	Score=313;Name=lod=25	NA	19p13.2	Score=748;Name=V$TCF11MAFG_01	Name=ZBTB7A_(SC-34508),Pol2-4H8	Name=126	NA	rs1056538	0.29	0.29	0.269	0.289537	0.4056	0.2371	0.5202	0.0439	0.3926	0.41	0.25	0.48	0.02	0.3829	0.48	0.28	T	0.006	B	0.006	B	0.325	N	0.999	P	1.87	L	3.44	T	-0.951	T	0.000	T	0.07	3.266	16.96	3.27	1.336	0.359	5.044	3.265958	3.265958	0.29	0.389044	0.098956	NA	0.29	NA	12.1557894
439	10	100148176	100148176	A	G	exonic	PYROXD2	NA	nonsynonymous SNV	PYROXD2:NM_032709:exon13:c.T1382C:p.M461T	exonic	ENSG00000119943	NA	nonsynonymous SNV	ENSG00000119943:ENST00000370575:exon13:c.T1382C:p.M461T	Score=503;Name=lod=147	NA	10q24.2	NA	Name=CTCF_(SC-5916),CTCF	Name=9	NA	rs2147896	0.56	0.56	0.542	0.599641	0.3479	0.5833	0.5418	0.8752	0.544	0.35	0.59	0.51	0.87	0.4745	0.87	1	T	0.0	B	0.0	B	0.000	N	0.999	P	-2.28	N	2.07	T	-0.968	T	0.000	T	0.142	-0.744	0.834	4.92	1.095	6.425	13.121	-0.744101	NA	1	0.358023	0.767136	NA	0.486	NA	12.1529104
439	8	144995494	144995494	C	T	exonic	PLEC	NA	nonsynonymous SNV	PLEC:NM_201378:exon32:c.G8453A:p.R2818H,PLEC:NM_201379:exon32:c.G8429A:p.R2810H,PLEC:NM_201380:exon32:c.G8906A:p.R2969H,PLEC:NM_201381:exon32:c.G8399A:p.R2800H,PLEC:NM_201382:exon32:c.G8495A:p.R2832H,PLEC:NM_201383:exon32:c.G8507A:p.R2836H,PLEC:NM_201384:exon32:c.G8495A:p.R2832H,PLEC:NM_000445:exon33:c.G8576A:p.R2859H	exonic	ENSG00000178209	NA	nonsynonymous SNV	ENSG00000178209:ENST00000322810:exon32:c.G8906A:p.R2969H,ENSG00000178209:ENST00000345136:exon32:c.G8495A:p.R2832H,ENSG00000178209:ENST00000354589:exon32:c.G8495A:p.R2832H,ENSG00000178209:ENST00000354958:exon32:c.G8429A:p.R2810H,ENSG00000178209:ENST00000356346:exon32:c.G8453A:p.R2818H,ENSG00000178209:ENST00000357649:exon32:c.G8507A:p.R2836H,ENSG00000178209:ENST00000398774:exon32:c.G8399A:p.R2800H,ENSG00000178209:ENST00000527096:exon32:c.G8564A:p.R2855H,ENSG00000178209:ENST00000436759:exon33:c.G8576A:p.R2859H	Score=535;Name=lod=200	NA	8q24.3	Score=772;Name=V$MIF1_01	NA	NA	NA	rs6558407	0.25	0.25	0.205	0.230631	0.4294	0.1419	0.2939	0.028	0.3466	0.42	0.16	0.3	0.03	0.3444	0.42	0.06	T	0.116	B	0.01	B	0.005	U	0.236	P	3.305	M	-1.25	T	-1.069	T	0.000	T	0.142	1.19	9.838	2.11	0.222	2.910	7.380	1.190145	NA	0.01	0.41168	0.092323	NA	0.239	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000078902.3;CLNDSDB=.;CLNDSDBID=.	12.1478534
439	6	152470752	152470752	C	A	exonic	SYNE1	NA	nonsynonymous SNV	SYNE1:NM_033071:exon135:c.G24289T:p.A8097S,SYNE1:NM_182961:exon136:c.G24502T:p.A8168S	exonic	ENSG00000131018	NA	nonsynonymous SNV	ENSG00000131018:ENST00000354674:exon7:c.G967T:p.A323S,ENSG00000131018:ENST00000539504:exon7:c.G967T:p.A323S,ENSG00000131018:ENST00000367257:exon16:c.G2440T:p.A814S,ENSG00000131018:ENST00000367251:exon21:c.G3268T:p.A1090S,ENSG00000131018:ENST00000356820:exon51:c.G8074T:p.A2692S,ENSG00000131018:ENST00000423061:exon135:c.G24289T:p.A8097S,ENSG00000131018:ENST00000265368:exon136:c.G24502T:p.A8168S,ENSG00000131018:ENST00000367255:exon136:c.G24502T:p.A8168S,ENSG00000131018:ENST00000448038:exon136:c.G24289T:p.A8097S,ENSG00000131018:ENST00000341594:exon137:c.G23338T:p.A7780S	Score=497;Name=lod=139	NA	6q25.1	Score=880;Name=V$CEBPA_01	NA	NA	NA	rs17082236	0.1	0.1	0.11	0.115615	0.0646	0.001	0.0865	0.3283	0.0194	0.06	NA	0.09	0.29	0.0677	0.29	0.78	T	0.003	B	0.016	B	0.009	N	0.000	P	0.345	N	0.63	T	-1.055	T	0.027	T	0.054	2.819	15.39	3.96	0.760	1.542	10.982	2.819315	2.819315	0.14	0.054767	0.285747	NA	0.065	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118466.2;CLNDSDB=.;CLNDSDBID=.	12.1462664
439	11	63991581	63991581	G	A	exonic	TRPT1	NA	nonsynonymous SNV	TRPT1:NM_001160393:exon6:c.C664T:p.R222C,TRPT1:NM_031472:exon6:c.C514T:p.R172C,TRPT1:NM_001033678:exon7:c.C661T:p.R221C,TRPT1:NM_001160389:exon7:c.C667T:p.R223C,TRPT1:NM_001160390:exon7:c.C661T:p.R221C	exonic	ENSG00000149743	NA	nonsynonymous SNV	ENSG00000149743:ENST00000546133:exon3:c.C235T:p.R79C,ENSG00000149743:ENST00000394547:exon6:c.C514T:p.R172C,ENSG00000149743:ENST00000317459:exon7:c.C661T:p.R221C,ENSG00000149743:ENST00000394546:exon7:c.C667T:p.R223C	NA	NA	11q13.1	Score=781;Name=V$HEN1_02	Name=Pol2(b),Pol2	Name=28	NA	rs11549690	0.03	0.03	0.018	0.0209665	0.0646	NA	0.0476	0.003	0.0031	0.06	NA	0.05	NA	0.0506	0.073	0.01	D	0.083	B	0.026	B	0.351	N	0.969	N	0.975	L	1.88	T	-1.084	T	0.009	T	0.413	0.907	8.688	1.97	0.688	1.659	8.363	0.906698	NA	0	0.073074	0.01522	NA	0.014	NA	12.1450594
440	17	61987570	61987570	G	T	exonic	CSHL1	NA	nonsynonymous SNV	CSHL1:NM_001318:exon3:c.C141A:p.D47E,CSHL1:NM_022580:exon3:c.C174A:p.D58E,CSHL1:NM_022579:exon4:c.C423A:p.D141E,CSHL1:NM_022581:exon4:c.C354A:p.D118E	exonic	ENSG00000204414	NA	nonsynonymous SNV	ENSG00000204414:ENST00000346606:exon3:c.C141A:p.D47E,ENSG00000204414:ENST00000438387:exon3:c.C174A:p.D58E,ENSG00000204414:ENST00000450719:exon3:c.C141A:p.D47E,ENSG00000204414:ENST00000561003:exon3:c.C174A:p.D58E,ENSG00000204414:ENST00000259003:exon4:c.C237A:p.D79E,ENSG00000204414:ENST00000309894:exon4:c.C423A:p.D141E	Score=528;Name=lod=186	NA	17q23.3	NA	NA	NA	NA	rs2727307	0.32	0.32	0.276	0.277955	0.4185	0.4196	0.3256	0.059	0.2495	0.42	0.38	0.37	0.08	0.3593	0.42	0	D	0.389	B	0.266	B	0.008	N	0.000	P	0.895	L	-2.64	D	-1.072	T	0.000	T	0.403	0.843	8.404	3.07	1.730	1.431	8.274	0.842563	NA	0.06	0.414186	0.125965	ID=COSM1178446,COSM1178445;OCCURENCE=1(prostate)	0.362	NA	12.1413474
440	11	18743180	18743180	C	G	exonic	IGSF22	NA	nonsynonymous SNV	IGSF22:NM_173588:exon4:c.G280C:p.A94P	exonic	ENSG00000179057	NA	nonsynonymous SNV	ENSG00000179057:ENST00000319338:exon4:c.G280C:p.A94P,ENSG00000179057:ENST00000513874:exon4:c.G280C:p.A94P	Score=381;Name=lod=47	NA	11p15.1	Score=880;Name=V$NFKAPPAB50_01	Name=Rad21,CTCF,CTCF_(C-20)	Name=4	NA	rs10832975	0.35	0.35	0.318	0.360024	0.3897	0.3224	0.5187	0.171	0.5112	0.41	0.31	0.51	0.19	0.4102	0.51	1	T	0.0	B	0.0	B	0.092	N	1.000	P	-2.68	N	0.37	T	-0.895	T	0.000	T	0.106	0.617	7.324	4.39	0.606	5.417	13.175	0.617487	NA	1	0.393691	0.217118	ID=COSM428799,COSM428800;OCCURENCE=1(breast)	0.442	NA	12.1397424
441	12	1553797	1553797	A	G	exonic	ERC1	NA	nonsynonymous SNV	ERC1:NM_178039:exon17:c.A3010G:p.T1004A,ERC1:NM_178040:exon18:c.A3094G:p.T1032A	exonic	ENSG00000082805	NA	nonsynonymous SNV	ENSG00000082805:ENST00000355446:exon17:c.A3094G:p.T1032A,ENSG00000082805:ENST00000543086:exon17:c.A3010G:p.T1004A,ENSG00000082805:ENST00000589028:exon17:c.A3094G:p.T1032A,ENSG00000082805:ENST00000360905:exon18:c.A3094G:p.T1032A,ENSG00000082805:ENST00000397203:exon18:c.A3094G:p.T1032A,ENSG00000082805:ENST00000546231:exon20:c.A3106G:p.T1036A	Score=703;Name=lod=957	NA	12p13.33	Score=914;Name=V$USF_02	NA	NA	NA	rs12319376	0.16	0.16	0.169	0.189297	0.0567	0.006	0.0994	0.587	0.0409	0.05	0.01	0.09	0.55	0.0907	0.55	1	T	0.0	B	0.0	B	0.001	N	1.000	P	-0.55	N	2.11	T	-0.950	T	0.000	T	0.089	0.203	5.093	4.56	1.368	3.033	12.242	0.202824	NA	1	0.052674	0.543804	NA	0.232	NA	12.1332594
441	14	75230953	75230953	C	T	exonic	YLPM1	NA	nonsynonymous SNV	YLPM1:NM_019589:exon1:c.C761T:p.P254L	exonic	ENSG00000119596	NA	nonsynonymous SNV	ENSG00000119596:ENST00000238571:exon1:c.C761T:p.P254L,ENSG00000119596:ENST00000325680:exon1:c.C761T:p.P254L,ENSG00000119596:ENST00000552421:exon1:c.C761T:p.P254L	Score=530;Name=lod=190	NA	14q24.3	NA	NA	Name=73	NA	rs45599947	0.03	0.03	0.027	0.0267572	0.0736	0.001	0.0288	0.0015	0.0378	0.08	NA	0.03	0.002	0.0544	0.08	0.69	T	0.004	B	0.01	B	0.089	N	0.962	N	0	N	2.04	T	-1.027	T	0.002	T	0.085	-0.088	3.571	4.31	2.218	2.015	12.174	-0.087629	NA	0.07	0.073705	0.016241	NA	0.087	NA	12.1316284
442	19	39229089	39229089	A	G	exonic	CAPN12	NA	nonsynonymous SNV	CAPN12:NM_144691:exon7:c.T859C:p.C287R	exonic	ENSG00000182472	NA	nonsynonymous SNV	ENSG00000182472:ENST00000601953:exon6:c.T412C:p.C138R,ENSG00000182472:ENST00000328867:exon7:c.T859C:p.C287R	Score=470;Name=lod=108	NA	19q13.2	Score=774;Name=V$PAX5_01	NA	NA	NA	rs12983010	0.1	0.1	0.072	0.113219	0.0646	0.0982	0.1326	0.1483	0.1176	0.07	0.12	0.1	0.14	0.081	0.14	0.44	T	0.0	B	0.0	B	0.031	N	0.873	P	-2.135	N	-2.15	D	-1.012	T	0.002	T	0.06	1.122	9.575	5.02	1.272	0.179	7.656	1.122059	NA	0.5	0.063968	0.110732	NA	0.123	NA	12.1237654
442	11	64009879	64009879	G	A	exonic	FKBP2	NA	nonsynonymous SNV	FKBP2:NM_001135208:exon2:c.G20A:p.R7Q,FKBP2:NM_004470:exon2:c.G20A:p.R7Q,FKBP2:NM_057092:exon2:c.G20A:p.R7Q	exonic	ENSG00000173486	NA	nonsynonymous SNV	ENSG00000173486:ENST00000309366:exon2:c.G20A:p.R7Q,ENSG00000173486:ENST00000394540:exon2:c.G20A:p.R7Q,ENSG00000173486:ENST00000449942:exon2:c.G20A:p.R7Q,ENSG00000173486:ENST00000535135:exon2:c.G20A:p.R7Q	Score=510;Name=lod=158	NA	11q13.1	NA	Name=ELF1_(SC-631),Pol2,Pol2-4H8	Name=72	NA	rs4672	0.03	0.03	0.027	0.0249601	0.0736	NA	0.0533	0.0038	0.0092	0.06	NA	0.06	NA	0.0569	0.08	0.3	T	0.0	B	0.0	B	0.443	N	1.000	N	0	N	1.27	T	-1.047	T	0.003	T	0.071	1.926	12.4	2.3	0.931	-1.217	5.793	1.925613	1.925613	0.63	0.079474	0.016583	NA	0.022	NA	12.1233594
442	12	11183108	11183108	G	C	exonic	TAS2R31	NA	nonsynonymous SNV	TAS2R31:NM_176885:exon1:c.C827G:p.P276R	exonic	ENSG00000256436	NA	nonsynonymous SNV	ENSG00000256436:ENST00000390675:exon1:c.C827G:p.P276R	NA	NA	12p13.2	NA	NA	NA	NA	rs12318612	0.16	0.16	0.122	0.122604	0.2734	NA	0.2161	0.1051	0.0511	0.28	NA	0.2	0.14	0.1867	0.28	0	D	0.741	P	0.356	B	.	.	0.999	P	1.975	M	-0.08	T	-1.077	T	0.000	T	0.172	1.045	9.268	2.41	1.376	1.677	8.345	1.04489	NA	NA	0.253585	0.124688	NA	0.094	NA	12.1196484
442	6	70961833	70961833	T	C	exonic	COL9A1	NA	nonsynonymous SNV	COL9A1:NM_078485:exon22:c.A1133G:p.Q378R,COL9A1:NM_001851:exon28:c.A1862G:p.Q621R	exonic	ENSG00000112280	NA	nonsynonymous SNV	ENSG00000112280:ENST00000320755:exon22:c.A1133G:p.Q378R,ENSG00000112280:ENST00000370499:exon22:c.A1133G:p.Q378R,ENSG00000112280:ENST00000357250:exon28:c.A1862G:p.Q621R	Score=374;Name=lod=44	NA	6q13	Score=866;Name=V$ELK1_01	NA	NA	NA	rs1135056	0.35	0.35	0.323	0.326677	0.4274	0.2917	0.2522	0.3646	0.2607	0.42	0.26	0.3	0.39	0.3753	0.42	0.76	T	0.001	B	0.003	B	0.001	N	0.000	P	-0.14	N	-3.18	D	-0.684	T	0.339	T	0.019	0.374	6.03	4.93	1.459	1.631	13.120	0.373878	NA	0.4	0.413837	0.347935	NA	0.464	NA	12.1167964
443	5	161128627	161128627	C	T	exonic	GABRA6	NA	nonsynonymous SNV	GABRA6:NM_000811:exon9:c.C1210T:p.P404S	exonic	ENSG00000145863	NA	nonsynonymous SNV	ENSG00000145863:ENST00000274545:exon9:c.C1210T:p.P404S,ENSG00000145863:ENST00000523217:exon9:c.C1180T:p.P394S	Score=358;Name=lod=38	NA	5q34	NA	NA	NA	NA	rs34907804	0.07	0.07	0.059	0.0728834	0.0765	NA	0.085	0.1369	0.0491	0.07	NA	0.11	0.13	0.0663	0.16	0.43	T	0.005	B	0.002	B	0.004	N	0.837	P	0.895	L	-1.71	D	-0.963	T	0.006	T	0.158	0.84	8.391	5.16	2.571	3.751	9.259	0.839816	NA	0.14	0.077442	0.122787	NA	0.152	NA	12.1130914
443	17	66364691	66364691	C	G	exonic	ARSG	NA	nonsynonymous SNV	ARSG:NM_001267727:exon7:c.C707G:p.T236S,ARSG:NM_014960:exon7:c.C707G:p.T236S	exonic	ENSG00000141337	NA	nonsynonymous SNV	ENSG00000141337:ENST00000452479:exon6:c.C215G:p.T72S,ENSG00000141337:ENST00000448504:exon7:c.C707G:p.T236S	Score=417;Name=lod=66	NA	17q24.2	NA	Name=AP-2alpha,AP-2gamma	Name=5	NA	rs1558876	0.29	0.29	0.255	0.275958	0.4076	0.126	0.3934	0.1914	0.3262	0.42	0.14	0.38	0.19	0.3784	0.44	0.18	T	0.026	B	0.023	B	0.372	N	0.994	P	0.41	N	.	.	-0.972	T	0.000	T	0.1	-0.195	3.051	4.24	2.733	2.123	13.000	-0.195352	NA	0.23	0.438256	0.223332	NA	0.254	NA	12.1090774
443	4	42895308	42895308	G	A	exonic	GRXCR1	NA	nonsynonymous SNV	GRXCR1:NM_001080476:exon1:c.G25A:p.E9K	exonic	ENSG00000215203	NA	nonsynonymous SNV	ENSG00000215203:ENST00000399770:exon1:c.G25A:p.E9K	Score=329;Name=lod=29	NA	4p13	NA	NA	NA	NA	rs78136490	0.13	0.13	0.126	0.123203	0.0716	0.1567	0.0648	0.2307	0.0378	0.07	0.14	0.06	0.24	0.0883	0.24	0.38	T	0.155	B	0.014	B	0.001	U	0.002	P	1.59	L	1.23	T	-1.045	T	0.000	T	0.16	1.769	11.87	4.99	1.451	5.087	16.148	1.769118	1.769118	0.02	0.065566	0.180473	NA	0.116	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000036856.1;CLNDSDB=.;CLNDSDBID=.	12.1078674
443	11	111754574	111754574	A	C	exonic	C11orf1	NA	synonymous SNV	C11orf1:NM_022761:exon4:c.A423C:p.S141S	exonic	ENSG00000137720	NA	nonsynonymous SNV	ENSG00000137720:ENST00000530214:exon3:c.A356C:p.Q119P	Score=383;Name=lod=48	NA	11q23.1	Score=792;Name=V$OCT1_04	NA	NA	NA	rs1045282	0.27	0.27	0.256	0.239617	0.3231	0.1905	0.3069	0.1952	0.2168	0.32	0.18	0.35	0.23	0.27	0.35	0.03	D	.	.	.	.	.	.	0.000	P	.	.	1.82	T	-0.941	T	0.000	T	.	1.389	10.58	4.22	1.017	1.708	5.789	1.389114	1.389114	NA	0.300093	0.218764	NA	0.304	NA	12.106807
443	1	64097432	64097432	C	T	exonic	PGM1	NA	nonsynonymous SNV	PGM1:NM_001172818:exon4:c.C715T:p.R239C,PGM1:NM_001172819:exon4:c.C70T:p.R24C,PGM1:NM_002633:exon4:c.C661T:p.R221C	exonic	ENSG00000079739	NA	nonsynonymous SNV	ENSG00000079739:ENST00000371083:exon4:c.C715T:p.R239C,ENSG00000079739:ENST00000371084:exon4:c.C661T:p.R221C,ENSG00000079739:ENST00000540265:exon4:c.C70T:p.R24C	Score=410;Name=lod=62	NA	1p31.3	NA	NA	NA	NA	rs1126728	0.24	0.24	0.212	0.241414	0.2505	0.2688	0.2478	0.1876	0.272	0.25	0.29	0.25	0.17	0.2428	0.29	0.26	T	0.679	P	0.143	B	0.000	D	0.000	P	1.015	L	-0.0	T	-0.970	T	0.107	T	0.567	4.263	22.2	5.75	2.885	2.557	20.327	4.263036	4.263036	0.23	0.234419	0.201089	NA	0.261	NA	12.1056144
444	1	93073228	93073228	C	A	exonic	EVI5	NA	nonsynonymous SNV	EVI5:NM_005665:exon15:c.G1836T:p.Q612H	exonic	ENSG00000067208	NA	nonsynonymous SNV	ENSG00000067208:ENST00000370331:exon15:c.G1836T:p.Q612H,ENSG00000067208:ENST00000540033:exon15:c.G1836T:p.Q612H,ENSG00000067208:ENST00000543509:exon16:c.G1869T:p.Q623H	Score=460;Name=lod=99	NA	1p22.1	NA	NA	NA	NA	rs11808092	0.15	0.15	0.141	0.123403	0.2744	0.0159	0.1873	0.0696	0.1063	0.27	0.02	0.22	0.06	0.1994	0.27	0.05	D	0.589	P	0.439	B	0.000	N	0.000	P	2.255	M	1.4	T	-0.984	T	0.080	T	0.298	3.072	16.26	4.67	1.342	0.689	10.749	3.071826	3.071826	0.04	0.256571	0.10604	NA	0.239	NA	12.1029624
444	4	187539588	187539588	T	C	exonic	FAT1	NA	nonsynonymous SNV	FAT1:NM_005245:exon10:c.A8152G:p.I2718V	exonic	ENSG00000083857	NA	nonsynonymous SNV	ENSG00000083857:ENST00000441802:exon10:c.A8152G:p.I2718V	Score=437;Name=lod=80	NA	4q35.2	NA	NA	NA	NA	rs3733406	0.07	0.07	0.071	0.0571086	0.0905	0.0268	0.049	0.0696	0.0429	0.1	0.03	0.07	0.06	0.0663	0.1	0.7	T	0.004	B	0.01	B	0.000	D	0.080	P	-0.215	N	0.78	T	-1.060	T	0.002	T	0.024	-0.242	2.835	5.0	2.225	1.644	8.607	-0.241701	NA	0.89	0.073848	0.069341	NA	0.051	NA	12.1026854
444	2	1499927	1499927	A	C	exonic	TPO	NA	nonsynonymous SNV	TPO:NM_175722:exon10:c.A1654C:p.T552P,TPO:NM_001206745:exon11:c.A2002C:p.T668P,TPO:NM_175719:exon11:c.A2002C:p.T668P,TPO:NM_175721:exon11:c.A2173C:p.T725P,TPO:NM_000547:exon12:c.A2173C:p.T725P,TPO:NM_001206744:exon12:c.A2173C:p.T725P	exonic	ENSG00000115705	NA	nonsynonymous SNV	ENSG00000115705:ENST00000469607:exon3:c.A595C:p.T199P,ENSG00000115705:ENST00000422464:exon9:c.A1960C:p.T654P,ENSG00000115705:ENST00000382198:exon10:c.A1654C:p.T552P,ENSG00000115705:ENST00000349624:exon11:c.A1654C:p.T552P,ENSG00000115705:ENST00000382201:exon11:c.A2002C:p.T668P,ENSG00000115705:ENST00000329066:exon12:c.A2173C:p.T725P,ENSG00000115705:ENST00000337415:exon12:c.A2173C:p.T725P,ENSG00000115705:ENST00000345913:exon12:c.A2173C:p.T725P,ENSG00000115705:ENST00000346956:exon12:c.A2173C:p.T725P	Score=259;Name=lod=15	NA	2p25.3	NA	Name=AP-2gamma	Name=7	NA	rs732609	0.47	0.47	0.482	0.498403	0.4026	0.4087	0.438	0.6498	0.5276	0.39	0.43	0.43	0.67	0.428	0.67	1	T	0.0	B	0.0	B	0.000	N	0.000	P	-2.755	N	-0.5	T	-0.913	T	0.000	T	0.408	-1.591	0.014	4.39	0.993	3.471	11.196	-1.590934	NA	1	0.400116	0.607354	NA	0.449	NA	12.1026174
444	17	47783663	47783663	C	T	exonic	SLC35B1	NA	nonsynonymous SNV	SLC35B1:NM_005827:exon3:c.G242A:p.R81H	exonic	ENSG00000121073	NA	nonsynonymous SNV	ENSG00000121073:ENST00000511763:exon2:c.G113A:p.R38H,ENSG00000121073:ENST00000240333:exon3:c.G242A:p.R81H,ENSG00000121073:ENST00000415270:exon3:c.G353A:p.R118H,ENSG00000121073:ENST00000507773:exon3:c.G217A:p.V73I,ENSG00000121073:ENST00000511657:exon3:c.G41A:p.R14H,ENSG00000121073:ENST00000514907:exon3:c.G149A:p.R50H,ENSG00000121073:ENST00000503334:exon4:c.G41A:p.R14H,ENSG00000121073:ENST00000508520:exon4:c.G251A:p.R84H,ENSG00000121073:ENST00000515850:exon4:c.G344A:p.R115H	Score=693;Name=lod=876	NA	17q21.33	NA	NA	NA	NA	rs1135034	0.05	0.05	0.053	0.0519169	0.0865	NA	0.036	0.1006	0.0153	0.08	NA	0.05	0.07	0.0628	0.086	0.13	T	0.014	B	0.013	B	0.000	D	0.000	P	0.15	N	1.54	T	-0.990	T	0.007	T	0.327	2.582	14.6	4.77	2.465	4.511	17.599	2.582492	2.582492	0.21	0.085233	0.085792	NA	0.043	NA	12.0988004
444	2	228128568	228128568	G	A	exonic	COL4A3	NA	nonsynonymous SNV	COL4A3:NM_000091:exon21:c.G1223A:p.R408H	exonic	ENSG00000169031	NA	nonsynonymous SNV	ENSG00000169031:ENST00000396578:exon21:c.G1223A:p.R408H	Score=343;Name=lod=33	NA	2q36.3	NA	NA	NA	NA	rs34505188	0.1	0.1	0.063	0.100639	0.0686	0.1577	0.1772	0.028	0.1186	0.06	0.15	0.16	0.03	0.091	0.16	0.3	T	0.999	D	0.912	D	0.019	N	0.998	P	0.98	L	-3.33	D	-0.722	T	0.010	T	0.111	0.886	8.597	2.07	0.456	0.671	2.641	0.88596	NA	0.16	0.077036	0.033011	NA	0.051	NA	12.0966974
444	15	100269680	100269680	G	C	exonic	LYSMD4	NA	nonsynonymous SNV	LYSMD4:NM_152449:exon6:c.C542G:p.A181G	exonic	ENSG00000183060	NA	nonsynonymous SNV	ENSG00000183060:ENST00000409796:exon3:c.C539G:p.A180G,ENSG00000183060:ENST00000332728:exon4:c.C539G:p.A180G,ENSG00000183060:ENST00000545021:exon4:c.C161G:p.A54G,ENSG00000183060:ENST00000344791:exon6:c.C542G:p.A181G	Score=309;Name=lod=24	NA	15q26.3	NA	NA	NA	NA	rs2061007	0.42	0.42	0.389	0.38119	0.5905	0.374	0.451	0.0726	0.5409	0.61	0.39	0.49	0.1	0.5391	0.61	0.21	T	0.996	D	0.852	P	0.000	D	0.372	P	2.38	M	1.99	T	-0.937	T	0.000	T	0.199	1.963	12.52	2.2	0.183	1.382	10.647	1.962662	1.962662	0.23	0.608372	0.15842	NA	0.442	NA	12.0953614
445	21	46066764	46066764	C	T	exonic	KRTAP10-11	NA	nonsynonymous SNV	KRTAP10-11:NM_198692:exon1:c.C389T:p.S130F	exonic	ENSG00000243489	NA	nonsynonymous SNV	ENSG00000243489:ENST00000334670:exon1:c.C389T:p.S130F	Score=251;Name=lod=14	NA	21q22.3	NA	NA	NA	NA	rs4818952	0.76	0.76	0.742	0.777356	0.7694	0.6548	0.7493	0.8896	0.7802	0.77	0.63	0.77	0.89	0.7484	0.89	0	D	1.0	D	0.999	D	.	.	0.000	P	3.325	M	4.52	T	-1.103	T	0.000	T	0.233	1.79	11.95	3.32	1.583	0.618	10.528	1.790471	1.790471	0.01	0.722791	0.865411	NA	0.543	NA	12.0927424
445	9	107562804	107562804	T	C	exonic	ABCA1	NA	nonsynonymous SNV	ABCA1:NM_005502:exon35:c.A4760G:p.K1587R	exonic	ENSG00000165029	NA	nonsynonymous SNV	ENSG00000165029:ENST00000374736:exon35:c.A4760G:p.K1587R	Score=614;Name=lod=418	NA	9q31.1	NA	NA	Name=3	NA	rs2230808	0.59	0.59	0.559	0.538339	0.7922	0.5883	0.7478	0.1324	0.6258	0.79	0.61	0.71	0.17	0.6936	0.79	1	T	0.018	B	0.034	B	0.000	D	0.000	P	0.19	N	-2.23	D	-0.978	T	0.000	T	0.235	1.465	10.84	5.93	2.271	5.978	16.380	1.465085	1.465085	0.54	0.760465	0.242624	NA	0.522	NA	12.0870684
445	11	4945196	4945196	T	G	exonic	OR51G1	NA	nonsynonymous SNV	OR51G1:NM_001005237:exon1:c.A374C:p.Y125S	exonic	ENSG00000176879	NA	nonsynonymous SNV	ENSG00000176879:ENST00000321961:exon1:c.A374C:p.Y125S	Score=371;Name=lod=43	NA	11p15.4	Score=794;Name=V$PPARG_01	NA	NA	NA	rs1378739	0.66	0.66	0.664	0.657348	0.5686	0.7222	0.6484	0.7231	0.5992	0.55	0.72	0.67	0.76	0.5993	0.76	0	D	0.761	P	0.247	B	0.059	U	0.000	P	2.85	M	0.4	T	-0.966	T	0.000	T	0.338	1.063	9.34	2.99	1.760	0.375	9.016	1.062863	NA	0	0.579921	0.699228	NA	0.659	NA	12.0855124
446	4	69681936	69681936	G	T	exonic	UGT2B10	NA	nonsynonymous SNV	UGT2B10:NM_001075:exon1:c.G199T:p.D67Y,UGT2B10:NM_001144767:exon1:c.G199T:p.D67Y	exonic	ENSG00000109181	NA	nonsynonymous SNV	ENSG00000109181:ENST00000265403:exon1:c.G199T:p.D67Y,ENSG00000109181:ENST00000458688:exon1:c.G199T:p.D67Y	NA	NA	4q13.2	NA	Name=HEY1	NA	NA	rs61750900	0.05	0.05	0.046	0.0439297	0.0915	0.001	0.072	0.0356	0.0307	0.1	NA	0.07	0.03	0.0655	0.1	0.02	D	0.937	P	0.746	P	0.397	U	1.000	P	1.1	L	3.32	T	-1.026	T	0.006	T	0.044	0.171	4.922	-4.37	-1.398	-0.013	1.778	0.171385	NA	0.03	0.091671	0.041761	NA	0.094	NA	12.0846624
446	10	64415184	64415184	A	G	exonic	ZNF365	NA	nonsynonymous SNV	ZNF365:NM_199452:exon4:c.A184G:p.T62A	exonic	ENSG00000138311	NA	nonsynonymous SNV	ENSG00000138311:ENST00000395251:exon4:c.A184G:p.T62A	NA	Name=Crohn's disease	10q21.2	NA	Name=SRF,NFKB,Pol2-4H8,Pol2	NA	NA	rs7076156	0.85	0.85	0.865	0.871206	0.7266	0.8968	0.8329	0.9826	0.8701	0.73	0.91	0.81	0.97	0.7939	0.97	0	D	0.0	B	0.001	B	.	.	1.000	P	0	N	0.71	T	-0.989	T	0.000	T	0.078	0.099	4.534	-6.85	-2.089	-2.262	10.440	0.099119	NA	0.8	0.733837	0.945756	NA	0.841	CLINSIG=other;CLNDBN=Uric_acid_nephrolithiasis\x2c_susceptibility_to;CLNREVSTAT=single;CLNACC=RCV000002951.1;CLNDSDB=MedGen:OMIM;CLNDSDBID=C2700426:605990	12.0789964
446	14	21623836	21623836	G	A	exonic	OR5AU1	NA	nonsynonymous SNV	OR5AU1:NM_001004731:exon1:c.C349T:p.L117F	exonic	ENSG00000169327	NA	nonsynonymous SNV	ENSG00000169327:ENST00000304418:exon1:c.C349T:p.L117F	Score=475;Name=lod=114	NA	14q11.2	NA	NA	NA	NA	rs4982419	0.65	0.65	0.66	0.664736	0.7624	0.4851	0.6916	0.6702	0.7229	0.75	0.47	0.72	0.66	0.7147	0.78	0.01	D	1.0	D	1.0	D	.	.	0.000	P	1.22	L	6.89	T	-1.212	T	0.000	T	0.3	2.471	14.22	4.34	2.265	0.954	14.412	2.471261	2.471261	0.03	0.779767	0.665456	NA	0.674	NA	12.0764664
446	9	32526146	32526146	G	A	exonic	DDX58	NA	nonsynonymous SNV	DDX58:NM_014314:exon1:c.C19T:p.R7C	exonic	ENSG00000107201	NA	nonsynonymous SNV	ENSG00000107201:ENST00000379882:exon1:c.C19T:p.R7C,ENSG00000107201:ENST00000379883:exon1:c.C19T:p.R7C	NA	NA	9p21.1	NA	Name=Pol2,TAF1,GATA-1,TBP,c-Myc,STAT2,HEY1,NFKB,STAT3,HA-E2F1,Sin3Ak-20,Pol2-4H8	Name=144	NA	rs10813831	0.19	0.19	0.197	0.184105	0.2773	0.1052	0.1628	0.2073	0.1534	0.27	0.07	0.19	0.2	0.2228	0.27	0	D	0.998	D	0.736	P	0.560	N	1.000	P	1.78	L	3.4	T	-0.978	T	0.000	T	0.146	2.744	15.14	-2.08	-0.381	-0.144	8.097	2.743956	2.743956	0	0.257326	0.231049	NA	0.123	NA	12.0759074
447	9	36169723	36169723	G	A	exonic	CCIN	NA	nonsynonymous SNV	CCIN:NM_005893:exon1:c.G224A:p.S75N	exonic	ENSG00000185972	NA	nonsynonymous SNV	ENSG00000185972:ENST00000335119:exon1:c.G224A:p.S75N	Score=542;Name=lod=213	NA	9p13.3	Score=801;Name=V$PPARG_01	NA	NA	NA	rs34789048	0.06	0.06	0.07	0.0555112	0.0934	NA	0.0375	0.0779	0.0562	0.09	NA	0.04	0.1	0.0715	0.1	0.74	T	0.0	B	0.0	B	0.018	N	0.998	N	0.3	N	-0.26	T	-1.122	T	0.004	T	0.012	-1.249	0.051	3.26	0.957	2.016	6.056	-1.248935	NA	0.77	0.094302	0.089877	NA	0.087	NA	12.0741314
448	1	77685042	77685042	T	C	exonic	PIGK	NA	nonsynonymous SNV	PIGK:NM_005482:exon1:c.A46G:p.T16A	exonic	ENSG00000142892	NA	nonsynonymous SNV	ENSG00000142892:ENST00000359130:exon1:c.A46G:p.T16A,ENSG00000142892:ENST00000370812:exon1:c.A46G:p.T16A,ENSG00000142892:ENST00000370813:exon1:c.A46G:p.T16A,ENSG00000142892:ENST00000445065:exon1:c.A46G:p.T16A	NA	NA	1p31.1	NA	Name=CTCF,THAP1_(SC-98174),TBP,CEBPB,IRF1,GTF2F1_(RAP-74),Max,c-Myc,ELF1_(SC-631),FOXA1_(SC-101058),HEY1,ZEB1_(SC-25388),NFKB,Oct-2,Pol2,ATF3,Pol2(phosphoS2),Ini1,STAT3,YY1,Egr-1,YY1_(C-20),Sin3Ak-20,TAF7_(SQ-8),USF1_(SC-8983),c-Fos,Pol2-4H8,Pol2(b),TAF1,GATA-1,ETS1,FOXA1_(C-20),E2F4,POU2F2	Name=148	NA	rs12723684	0.17	0.17	0.159	0.191693	0.0706	0.0387	0.2305	0.4644	0.0777	0.06	0.04	0.19	0.45	0.1228	0.45	0.62	T	0.0	B	0.0	B	0.309	N	1.000	P	-0.55	N	1.0	T	-1.014	T	0.019	T	0.013	0.012	4.075	4.58	1.549	1.006	9.016	0.011714	NA	0	0.077227	0.379709	NA	0.196	NA	12.0627064
448	8	53537316	53537316	A	G	exonic	RB1CC1	NA	synonymous SNV	RB1CC1:NM_001083617:exon23:c.T4659C:p.L1553L,RB1CC1:NM_014781:exon23:c.T4668C:p.L1556L	exonic	ENSG00000023287	NA	synonymous SNV	ENSG00000023287:ENST00000539297:exon21:c.T4659C:p.L1553L,ENSG00000023287:ENST00000025008:exon23:c.T4668C:p.L1556L,ENSG00000023287:ENST00000435644:exon23:c.T4659C:p.L1553L	Score=625;Name=lod=462	NA	8q11.23	NA	NA	NA	NA	rs1129660	0.32	0.32	0.299	0.285343	0.2058	0.6558	0.3184	0.0794	0.2403	0.21	0.69	0.28	0.11	0.2329	0.69	0	D	.	.	.	.	0.000	D	0.000	P	.	.	.	.	-0.904	T	0.000	T	.	1.105	9.506	4.21	2.154	1.334	1.776	1.10458	NA	NA	0.166085	0.088289	NA	0.304	NA	12.0618816
448	8	145001031	145001031	T	C	exonic	PLEC	NA	nonsynonymous SNV	PLEC:NM_201378:exon30:c.A3923G:p.H1308R,PLEC:NM_201379:exon30:c.A3899G:p.H1300R,PLEC:NM_201380:exon30:c.A4376G:p.H1459R,PLEC:NM_201381:exon30:c.A3869G:p.H1290R,PLEC:NM_201382:exon30:c.A3965G:p.H1322R,PLEC:NM_201383:exon30:c.A3977G:p.H1326R,PLEC:NM_201384:exon30:c.A3965G:p.H1322R,PLEC:NM_000445:exon31:c.A4046G:p.H1349R	exonic	ENSG00000178209	NA	nonsynonymous SNV	ENSG00000178209:ENST00000322810:exon30:c.A4376G:p.H1459R,ENSG00000178209:ENST00000345136:exon30:c.A3965G:p.H1322R,ENSG00000178209:ENST00000354589:exon30:c.A3965G:p.H1322R,ENSG00000178209:ENST00000354958:exon30:c.A3899G:p.H1300R,ENSG00000178209:ENST00000356346:exon30:c.A3923G:p.H1308R,ENSG00000178209:ENST00000357649:exon30:c.A3977G:p.H1326R,ENSG00000178209:ENST00000398774:exon30:c.A3869G:p.H1290R,ENSG00000178209:ENST00000527096:exon30:c.A4034G:p.H1345R,ENSG00000178209:ENST00000436759:exon31:c.A4046G:p.H1349R	Score=376;Name=lod=45	NA	8q24.3	NA	NA	Name=4	NA	rs55895668	0.45	0.45	0.488	0.466653	0.4344	0.1429	0.3674	0.8782	0.3476	0.42	0.16	0.38	0.86	0.4128	0.86	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-1.935	N	1.71	T	-1.000	T	0.000	T	0.273	0.865	8.506	3.9	1.009	1.623	7.478	0.865407	NA	1	0.429375	0.822767	ID=COSM150562,COSM150563;OCCURENCE=1(stomach)	0.543	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117968.2;CLNDSDB=.;CLNDSDBID=.	12.0567584
449	4	89311962	89311962	T	C	exonic	HERC6	NA	nonsynonymous SNV	HERC6:NM_001165136:exon4:c.T595C:p.C199R,HERC6:NM_017912:exon4:c.T595C:p.C199R	exonic	ENSG00000138642	NA	nonsynonymous SNV	ENSG00000138642:ENST00000264346:exon4:c.T595C:p.C199R,ENSG00000138642:ENST00000273960:exon4:c.T595C:p.C199R,ENSG00000138642:ENST00000380265:exon4:c.T595C:p.C199R	Score=567;Name=lod=268	NA	4q22.1	Score=768;Name=V$TCF11MAFG_01	NA	NA	NA	rs12510688	0.09	0.09	0.066	0.0822684	0.0934	0.1181	0.1844	0.0038	0.0675	0.1	0.09	0.19	0.01	0.0966	0.19	0.02	D	0.202	B	0.19	B	0.007	N	0.001	P	0.07	N	-1.29	T	-1.019	T	0.001	T	0.402	3.678	18.69	3.42	0.873	5.565	9.622	3.678447	3.678447	0	0.089767	0.021788	NA	0.058	NA	12.0535664
449	9	130165973	130165973	T	C	exonic	SLC2A8	NA	nonsynonymous SNV	SLC2A8:NM_001271712:exon4:c.T269C:p.I90T,SLC2A8:NM_001271711:exon6:c.T758C:p.I253T,SLC2A8:NM_014580:exon6:c.T758C:p.I253T	exonic	ENSG00000136856	NA	nonsynonymous SNV	ENSG00000136856:ENST00000430147:exon3:c.T275C:p.I92T,ENSG00000136856:ENST00000423934:exon4:c.T353C:p.I118T,ENSG00000136856:ENST00000451404:exon4:c.T269C:p.I90T,ENSG00000136856:ENST00000419917:exon5:c.T551C:p.I184T,ENSG00000136856:ENST00000373360:exon6:c.T758C:p.I253T,ENSG00000136856:ENST00000373371:exon6:c.T758C:p.I253T	Score=441;Name=lod=83	NA	9q33.3	NA	NA	NA	NA	rs34064803	0.06	0.06	0.047	0.0453275	0.1054	NA	0.0821	0.0272	0.0286	0.1	NA	0.09	0.03	0.0715	0.1	0.37	T	0.878	P	0.661	P	0.016	N	0.000	P	0.82	L	-0.82	T	-0.903	T	0.015	T	0.532	3.465	17.75	5.42	2.063	7.338	14.460	3.465299	3.465299	0	0.103023	0.03064	NA	0.036	NA	12.0534104
449	19	54744799	54744799	G	C	exonic	LILRA6	NA	nonsynonymous SNV	LILRA6:NM_024318:exon5:c.C863G:p.P288R	exonic	ENSG00000244482	NA	nonsynonymous SNV	ENSG00000244482:ENST00000245621:exon5:c.C863G:p.P288R,ENSG00000244482:ENST00000396365:exon5:c.C863G:p.P288R,ENSG00000244482:ENST00000419410:exon5:c.C863G:p.P288R,ENSG00000244482:ENST00000440558:exon5:c.C863G:p.P288R	NA	NA	19q13.42	NA	NA	NA	NA	rs1052975	0.18	0.18	0.091	NA	NA	NA	NA	NA	NA	0.21	0.22	0.15	0.14	0.2825	0.22	0.88	T	0.991	D	0.932	D	0.000	N	1.000	N	0.005	N	2.62	T	-0.903	T	0.000	T	0.15	-1.431	0.021	-4.75	-4.910	-3.366	3.320	-1.430762	NA	0.69	NA	NA	NA	0.007	NA	12.0508334
449	11	60704213	60704213	C	T	exonic	TMEM132A	NA	nonsynonymous SNV	TMEM132A:NM_017870:exon11:c.C2909T:p.A970V,TMEM132A:NM_178031:exon11:c.C2906T:p.A969V	exonic	ENSG00000006118	NA	nonsynonymous SNV	ENSG00000006118:ENST00000005286:exon11:c.C2909T:p.A970V,ENSG00000006118:ENST00000453848:exon11:c.C2906T:p.A969V	Score=439;Name=lod=81	NA	11q12.2	Score=829;Name=V$HNF4_01	NA	NA	NA	rs2469887	0.41	0.41	0.431	0.421925	0.4225	0.3165	0.4467	0.4735	0.4427	0.42	0.32	0.45	0.47	0.4304	0.51	0	D	0.098	B	0.008	B	0.026	N	0.890	P	1.845	L	3.28	T	-0.924	T	0.000	T	0.099	2.128	13.07	3.7	1.312	4.120	5.148	2.127516	2.127516	0.01	0.430565	0.466863	NA	0.493	NA	12.0498684
449	17	1782952	1782952	A	G	exonic	RPA1	NA	nonsynonymous SNV	RPA1:NM_002945:exon11:c.A1051G:p.T351A	exonic	ENSG00000132383	NA	nonsynonymous SNV	ENSG00000132383:ENST00000574049:exon3:c.A319G:p.T107A,ENSG00000132383:ENST00000254719:exon11:c.A1051G:p.T351A	Score=419;Name=lod=67	NA	17p13.3	Score=817;Name=V$PBX1_02	NA	NA	NA	rs5030755	0.04	0.04	0.042	0.0291534	0.1024	NA	0.0202	0.0045	0.0235	0.11	NA	0.03	0.0041	0.0742	0.11	0.53	T	0.0	B	0.001	B	0.005	N	0.995	P	0.865	L	2.37	T	-1.008	T	0.001	T	0.09	0.478	6.596	5.93	2.273	4.639	10.181	0.478367	NA	0.78	0.110116	0.021108	NA	0.043	NA	12.0466174
449	4	119952955	119952955	C	T	exonic	SYNPO2	NA	nonsynonymous SNV	SYNPO2:NM_001128933:exon4:c.C3025T:p.R1009W,SYNPO2:NM_001128934:exon4:c.C3025T:p.R1009W,SYNPO2:NM_133477:exon4:c.C3025T:p.R1009W	exonic	ENSG00000172403	NA	nonsynonymous SNV	ENSG00000172403:ENST00000307142:exon4:c.C3025T:p.R1009W,ENSG00000172403:ENST00000429713:exon4:c.C3025T:p.R1009W,ENSG00000172403:ENST00000434046:exon4:c.C3025T:p.R1009W	NA	NA	4q26	NA	Name=FOXA2_(SC-6554),FOXA1_(C-20)	NA	NA	rs61732241	0.05	0.05	0.04	0.0359425	0.1113	0.001	0.0562	0.0023	0.0256	0.11	NA	0.05	0.0041	0.0746	0.11	.	.	1.0	D	0.936	D	0.046	N	1.000	P	1.79	L	2.98	T	-1.101	T	0.001	T	0.201	0.935	8.808	3.41	0.538	-2.009	8.293	0.934621	NA	0.01	0.101512	0.019746	NA	0.065	NA	12.0459214
450	13	28624294	28624294	G	A	exonic	FLT3	NA	nonsynonymous SNV	FLT3:NM_004119:exon6:c.C680T:p.T227M	exonic	ENSG00000122025	NA	nonsynonymous SNV	ENSG00000122025:ENST00000241453:exon6:c.C680T:p.T227M,ENSG00000122025:ENST00000380982:exon6:c.C680T:p.T227M,ENSG00000122025:ENST00000380987:exon6:c.C680T:p.T227M,ENSG00000122025:ENST00000537084:exon6:c.C680T:p.T227M	Score=496;Name=lod=138	NA	13q12.2	NA	NA	Name=6	NA	rs1933437	0.57	0.57	0.554	0.558706	0.5805	0.7688	0.6066	0.2844	0.6564	0.58	0.75	0.61	0.3	0.5988	0.75	0.15	T	0.999	D	0.879	P	0.001	D	0.509	P	0.895	L	-1.03	T	-0.903	T	0.000	T	0.334	1.942	12.45	3.85	0.687	3.696	11.157	1.941805	1.941805	0	0.614884	0.343395	NA	0.486	NA	12.0391494
450	2	228855866	228855866	G	C	exonic	SPHKAP	NA	nonsynonymous SNV	SPHKAP:NM_030623:exon10:c.C4722G:p.S1574R,SPHKAP:NM_001142644:exon11:c.C4809G:p.S1603R	exonic	ENSG00000153820	NA	nonsynonymous SNV	ENSG00000153820:ENST00000344657:exon10:c.C4722G:p.S1574R,ENSG00000153820:ENST00000392056:exon11:c.C4809G:p.S1603R	NA	NA	2q36.3	Score=849;Name=V$OLF1_01	NA	NA	NA	rs16824283	0.2	0.2	0.164	0.175519	0.3022	0.2282	0.1931	0.0303	0.1748	0.29	0.21	0.21	0.03	0.2227	0.29	0.04	D	0.966	D	0.787	P	0.001	D	1.000	P	1.52	L	3.28	T	-1.030	T	0.000	T	0.07	1.699	11.64	-2.19	-0.511	0.210	13.899	1.699048	1.699048	0.09	0.269535	0.067181	ID=COSM1406006,COSM1406005;OCCURENCE=1(large_intestine)	0.225	NA	12.0388984
450	11	49080565	49080565	A	C	exonic	TRIM64C	NA	nonsynonymous SNV	TRIM64C:NM_001206631:exon1:c.T100G:p.F34V	exonic	ENSG00000214891	NA	nonsynonymous SNV	ENSG00000214891:ENST00000530230:exon1:c.T100G:p.F34V	Score=378;Name=lod=46	NA	11p11.12	NA	NA	NA	NA	rs7932738	0.17	0.17	0.142	0.180511	0.1352	0.1607	0.1268	0.3185	0.0992	0.14	0.16	0.12	0.29	0.1603	0.29	0.02	D	.	.	.	.	.	.	0.997	P	2.36	M	1.44	T	-1.038	T	0.000	T	0.666	2.613	14.7	1.55	0.994	4.322	5.259	2.612876	2.612876	0	NA	NA	ID=COSM147195;OCCURENCE=1(stomach)	0.181	NA	12.0378334
450	6	31129707	31129707	C	T	exonic	TCF19	NA	nonsynonymous SNV	TCF19:NM_001077511:exon3:c.C722T:p.P241L,TCF19:NM_007109:exon3:c.C722T:p.P241L	exonic	ENSG00000137310	NA	nonsynonymous SNV	ENSG00000137310:ENST00000542218:exon1:c.C482T:p.P161L,ENSG00000137310:ENST00000376255:exon3:c.C722T:p.P241L,ENSG00000137310:ENST00000376257:exon3:c.C722T:p.P241L	NA	NA	6p21.33	NA	NA	Name=4	NA	rs2073724	0.09	0.09	0.065	0.0810703	0.1123	0.0347	0.1383	0.0666	0.0757	0.12	0.04	0.15	0.06	0.099	0.15	0.33	T	0.906	P	0.521	P	0.408	N	1.000	P	1.61	L	1.96	T	-1.097	T	0.034	T	0.099	2.111	13.01	3.56	2.573	0.980	7.417	2.110858	2.110858	0.19	0.085552	0.053318	NA	0.051	NA	12.0364814
450	11	102562700	102562700	C	T	exonic	MMP27	NA	nonsynonymous SNV	MMP27:NM_022122:exon10:c.G1339A:p.D447N	exonic	ENSG00000137675	NA	nonsynonymous SNV	ENSG00000137675:ENST00000260229:exon10:c.G1339A:p.D447N	Score=507;Name=lod=153	NA	11q22.2	NA	NA	NA	NA	rs2509010	0.18	0.18	0.173	0.163738	0.2744	0.1081	0.2435	0.0696	0.1779	0.29	0.1	0.22	0.07	0.24	0.29	0.47	T	0.576	P	0.031	B	0.000	D	0.244	P	1.255	L	2.53	T	-0.903	T	0.000	T	0.039	2.422	14.06	3.86	2.819	1.080	10.216	2.422247	2.422247	0.32	0.283636	0.107808	NA	0.138	NA	12.0352974
451	11	19077765	19077765	T	C	exonic	MRGPRX2	NA	nonsynonymous SNV	MRGPRX2:NM_054030:exon2:c.A185G:p.N62S	exonic	ENSG00000183695	NA	nonsynonymous SNV	ENSG00000183695:ENST00000329773:exon2:c.A185G:p.N62S	NA	NA	11p15.1	Score=879;Name=V$IK3_01	Name=PU.1,Nrf1	NA	NA	rs10833049	0.32	0.32	0.293	0.31849	0.2614	0.2659	0.2781	0.5265	0.1789	0.25	0.25	0.28	0.52	0.2727	0.52	0.02	D	0.976	D	0.817	P	0.000	D	1.000	P	1.81	L	3.02	T	-0.902	T	0.000	T	0.012	2.515	14.37	1.41	0.130	0.390	2.945	2.515471	2.515471	0.02	0.265898	0.471578	ID=COSM147163;OCCURENCE=1(stomach)	0.283	NA	12.0333354
451	6	29913037	29913037	G	A	exonic	HLA-A	NA	nonsynonymous SNV	HLA-A:NM_001242758:exon7:c.G1072A:p.V358M,HLA-A:NM_002116:exon7:c.G1072A:p.V358M	exonic	ENSG00000206503	NA	nonsynonymous SNV	ENSG00000206503:ENST00000376806:exon7:c.G1090A:p.V364M,ENSG00000206503:ENST00000376809:exon7:c.G1072A:p.V358M,ENSG00000206503:ENST00000396634:exon9:c.G1072A:p.V358M	NA	NA	6p22.1	NA	Name=Pol2,Pol2-4H8	NA	NA	rs1137631	0.19	0.19	0.153	NA	NA	NA	NA	NA	NA	0.15	0.18	0.18	0.27	0.1569	0.27	0	D	0.999	D	0.998	D	0.837	U	1.000	P	3.015	M	4.12	T	-1.088	T	0.019	T	0.385	0.142	4.763	0.003	-0.132	-0.040	5.556	0.141947	NA	0.09	0.145	0.209033	ID=COSM1442961;OCCURENCE=1(large_intestine)	0.101	NA	12.0314334
452	22	39147235	39147235	A	C	exonic	SUN2	NA	nonsynonymous SNV	SUN2:NM_001199579:exon3:c.T266G:p.L89R,SUN2:NM_015374:exon3:c.T266G:p.L89R,SUN2:NM_001199580:exon4:c.T266G:p.L89R	exonic	ENSG00000100242	NA	nonsynonymous SNV	ENSG00000100242:ENST00000216064:exon3:c.T266G:p.L89R,ENSG00000100242:ENST00000405018:exon3:c.T266G:p.L89R,ENSG00000100242:ENST00000417332:exon3:c.T266G:p.L89R,ENSG00000100242:ENST00000433561:exon3:c.T266G:p.L89R,ENSG00000100242:ENST00000456894:exon3:c.T266G:p.L89R,ENSG00000100242:ENST00000405510:exon4:c.T266G:p.L89R,ENSG00000100242:ENST00000406622:exon4:c.T266G:p.L89R,ENSG00000100242:ENST00000411587:exon4:c.T371G:p.L124R,ENSG00000100242:ENST00000420859:exon4:c.T266G:p.L89R,ENSG00000100242:ENST00000438058:exon4:c.T266G:p.L89R,ENSG00000100242:ENST00000439339:exon4:c.T266G:p.L89R,ENSG00000100242:ENST00000452294:exon4:c.T266G:p.L89R	NA	NA	22q13.1	NA	NA	NA	NA	rs35496634	0.06	0.06	0.053	0.0347444	0.1243	NA	0.0461	0.0061	0.0092	0.14	NA	0.06	0.01	0.0764	0.14	0.04	D	0.952	P	0.598	P	0.002	N	0.977	P	0.695	N	2.49	T	-1.047	T	0.002	T	0.332	0.773	8.085	4.01	1.917	2.683	9.571	0.773188	NA	0	0.111279	0.020654	NA	0.065	NA	12.0213544
452	16	77401545	77401545	A	G	exonic	ADAMTS18	NA	nonsynonymous SNV	ADAMTS18:NM_199355:exon4:c.T571C:p.Y191H	exonic	ENSG00000140873	NA	nonsynonymous SNV	ENSG00000140873:ENST00000282849:exon4:c.T571C:p.Y191H,ENSG00000140873:ENST00000449265:exon4:c.T571C:p.Y191H	Score=553;Name=lod=236	NA	16q23.1	NA	NA	NA	NA	rs11643211	0.36	0.36	0.331	0.366813	0.2495	0.5774	0.5187	0.2519	0.318	0.23	0.59	0.46	0.23	0.3157	0.59	0.53	T	0.599	P	0.345	B	0.000	D	0.000	P	1.21	L	3.39	T	-1.062	T	0.000	T	0.568	3.252	16.91	4.72	1.980	6.985	13.538	3.251844	3.251844	0.08	0.248605	0.260464	NA	0.268	NA	12.0195284
452	2	17946243	17946243	A	G	exonic	GEN1	NA	nonsynonymous SNV	GEN1:NM_001130009:exon4:c.A428G:p.N143S,GEN1:NM_182625:exon4:c.A428G:p.N143S	exonic	ENSG00000178295	NA	nonsynonymous SNV	ENSG00000178295:ENST00000317402:exon4:c.A428G:p.N143S,ENSG00000178295:ENST00000381254:exon4:c.A428G:p.N143S	Score=366;Name=lod=41	NA	2p24.2	NA	NA	NA	NA	rs16981869	0.13	0.13	0.134	0.127995	0.1074	0.0337	0.1153	0.2436	0.0992	0.11	0.03	0.12	0.27	0.1045	0.27	0.03	D	0.812	P	0.553	P	0.011	N	0.000	P	1.18	L	-0.45	T	-1.083	T	0.000	T	0.048	2.946	15.82	3.32	0.435	6.885	8.027	2.946009	2.946009	0	0.102674	0.228779	NA	0.109	NA	12.0187594
452	3	130361856	130361856	G	A	exonic	COL6A6	NA	nonsynonymous SNV	COL6A6:NM_001102608:exon30:c.G5216A:p.R1739Q	exonic	ENSG00000206384	NA	nonsynonymous SNV	ENSG00000206384:ENST00000358511:exon30:c.G5216A:p.R1739Q,ENSG00000206384:ENST00000453409:exon30:c.G5216A:p.R1739Q	Score=458;Name=lod=97	NA	3q22.1	NA	NA	NA	NA	rs16830494	0.12	0.12	0.116	0.121206	0.0934	0.1855	0.1614	0.0461	0.1564	0.09	0.19	0.16	0.05	0.1243	0.19	0.04	D	0.272	B	0.032	B	.	.	0.733	P	1.67	L	-2.63	D	-0.992	T	0.002	T	0.132	2.809	15.35	3.06	0.387	1.703	9.697	2.808812	2.808812	0.05	0.097641	0.061867	NA	0.08	NA	12.0179924
452	2	28854958	28854958	C	T	exonic	PLB1	NA	nonsynonymous SNV	PLB1:NM_001170585:exon54:c.C3920T:p.A1307V,PLB1:NM_153021:exon55:c.C3953T:p.A1318V	exonic	ENSG00000163803	NA	nonsynonymous SNV	ENSG00000163803:ENST00000541605:exon15:c.C848T:p.A283V,ENSG00000163803:ENST00000422425:exon54:c.C3920T:p.A1307V,ENSG00000163803:ENST00000327757:exon55:c.C3953T:p.A1318V	NA	NA	2p23.2	NA	NA	NA	NA	rs2199619	0.26	0.26	0.258	0.253395	0.2823	0.3204	0.1844	0.1921	0.2863	0.3	0.29	0.19	0.22	0.2672	0.3	0.11	T	0.993	D	0.766	P	0.125	N	0.997	P	2.06	M	1.4	T	-1.049	T	0.000	T	0.518	3.349	17.28	4.49	1.290	2.540	9.892	3.349364	3.349364	0.04	0.266395	0.219246	NA	0.268	NA	12.0174384
453	11	56949691	56949691	G	A	exonic	LRRC55	NA	nonsynonymous SNV	LRRC55:NM_001005210:exon1:c.G324A:p.M108I	exonic	ENSG00000183908	NA	nonsynonymous SNV	ENSG00000183908:ENST00000497933:exon1:c.G324A:p.M108I	Score=352;Name=lod=36	NA	11q12.1	Score=834;Name=V$AHRARNT_01	NA	NA	NA	rs12364102	0.07	0.07	0.07	0.0664936	0.1113	0.0714	0.0879	0.0144	0.0706	0.1	0.07	0.1	0.02	0.0902	0.12	0.11	T	0.002	B	0.004	B	0.154	N	0.002	P	-0.77	N	1.01	T	-1.098	T	0.001	T	0.089	2.902	15.67	4.89	1.455	4.049	13.596	2.901736	2.901736	0.05	0.122439	0.030895	NA	0.029	NA	12.0093944
454	1	156264000	156264000	G	A	exonic	C1orf85	NA	nonsynonymous SNV	C1orf85:NM_001256605:exon3:c.C349T:p.P117S,C1orf85:NM_001256604:exon4:c.C607T:p.P203S,C1orf85:NM_001256608:exon4:c.C607T:p.P203S,C1orf85:NM_001256609:exon4:c.C364T:p.P122S,C1orf85:NM_144580:exon4:c.C607T:p.P203S	exonic	ENSG00000198715	NA	nonsynonymous SNV	ENSG00000198715:ENST00000368264:exon3:c.C349T:p.P117S,ENSG00000198715:ENST00000362007:exon4:c.C607T:p.P203S	NA	NA	1q22	NA	NA	NA	NA	rs10908496	0.21	0.21	0.178	0.199281	0.2694	0.2272	0.2738	0.0681	0.2229	0.27	0.24	0.23	0.07	0.2661	0.29	0.63	T	0.959	D	0.675	P	0.005	N	1.000	P	2.075	M	2.12	T	-1.071	T	0.041	T	0.38	1.613	11.35	4.59	1.277	1.928	12.459	1.612711	1.612711	0.2	0.292907	0.096005	NA	0.196	NA	12.0049264
454	6	132203615	132203615	G	A	splicing	ENPP1	NM_006208:exon21:c.2230+1G>A	NA	NA	splicing	ENSG00000197594	ENST00000360971:exon21:c.2230+1G>A,ENST00000513998:exon21:c.2204+1G>A	NA	NA	Score=387;Name=lod=50	NA	6q23.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000008239	NA	.	.	.	.	.	.	.	.	1.000	D	.	.	.	.	.	.	.	.	.	4.254	22.2	6.16	2.937	6.338	18.633	4.253761	4.253761	NA	NA	NA	NA	NA	NA	11.9999918
454	4	165878621	165878621	G	A	exonic	FAM218A	NA	stopgain	FAM218A:NM_153027:exon1:c.G447A:p.W149X	exonic	ENSG00000250486	NA	stopgain	ENSG00000250486:ENST00000513876:exon1:c.G447A:p.W149X	NA	NA	4q32.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00001662	NA	0	D	.	.	.	.	.	.	1.000	N	.	.	.	.	.	.	.	.	.	1.594	11.29	-2.48	-1.270	-0.507	0.078	1.593966	1.593966	0	NA	NA	NA	NA	NA	11.9999834
454	2	10186419	10186419	A	G	exonic	KLF11	NA	nonsynonymous SNV	KLF11:NM_001177716:exon2:c.A134G:p.Q45R,KLF11:NM_001177718:exon2:c.A134G:p.Q45R,KLF11:NM_003597:exon2:c.A185G:p.Q62R	exonic	ENSG00000172059	NA	nonsynonymous SNV	ENSG00000172059:ENST00000305883:exon2:c.A185G:p.Q62R,ENSG00000172059:ENST00000401510:exon2:c.A134G:p.Q45R,ENSG00000172059:ENST00000440320:exon2:c.A134G:p.Q45R,ENSG00000172059:ENST00000448523:exon2:c.A134G:p.Q45R,ENSG00000172059:ENST00000535335:exon2:c.A134G:p.Q45R,ENSG00000172059:ENST00000540845:exon2:c.A134G:p.Q45R	Score=540;Name=lod=209	NA	2p25.1	NA	NA	NA	NA	rs35927125	0.06	0.06	0.052	0.0579073	0.1233	0.003	0.072	0.034	0.0695	0.11	0.0017	0.1	0.03	0.0926	0.12	0.04	D	0.003	B	0.003	B	0.075	N	0.776	P	2.215	M	2.54	T	-1.045	T	0.004	T	0.079	1.637	11.43	-0.464	-0.043	2.349	5.936	1.636632	1.636632	0.11	0.121395	0.042896	NA	0.043	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117438.2;CLNDSDB=.;CLNDSDBID=.	11.9960384
455	2	238243464	238243464	C	G	exonic	COL6A3	NA	nonsynonymous SNV	COL6A3:NM_057166:exon38:c.G7213C:p.A2405P,COL6A3:NM_057167:exon40:c.G8416C:p.A2806P,COL6A3:NM_004369:exon41:c.G9034C:p.A3012P	exonic	ENSG00000163359	NA	nonsynonymous SNV	ENSG00000163359:ENST00000472056:exon38:c.G7213C:p.A2405P,ENSG00000163359:ENST00000409809:exon39:c.G8416C:p.A2806P,ENSG00000163359:ENST00000346358:exon40:c.G8434C:p.A2812P,ENSG00000163359:ENST00000347401:exon40:c.G8431C:p.A2811P,ENSG00000163359:ENST00000353578:exon40:c.G8416C:p.A2806P,ENSG00000163359:ENST00000295550:exon41:c.G9034C:p.A3012P	Score=371;Name=lod=43	NA	2q37.3	Score=830;Name=V$OLF1_01	Name=PAX5-C20	NA	NA	rs2270669	0.8	0.8	0.823	0.792332	0.7873	0.7312	0.67	0.9841	0.6881	0.78	0.74	0.7	0.97	0.7729	0.97	1	T	0.0	B	0.0	B	0.000	N	0.000	P	-1.995	N	2.08	T	-0.939	T	0.000	T	0.091	2.183	13.26	5.29	1.247	5.502	16.149	2.183382	2.183382	NA	0.778372	0.945756	NA	0.87	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000081019.2;CLNDSDB=.;CLNDSDBID=.	11.9947614
455	9	27561628	27561628	T	C	exonic	C9orf72	NA	nonsynonymous SNV	C9orf72:NM_001256054:exon5:c.A620G:p.N207S,C9orf72:NM_018325:exon5:c.A620G:p.N207S,C9orf72:NM_145005:exon5:c.A620G:p.N207S	exonic	ENSG00000147894	NA	nonsynonymous SNV	ENSG00000147894:ENST00000379995:exon5:c.A620G:p.N207S,ENSG00000147894:ENST00000379997:exon5:c.A620G:p.N207S,ENSG00000147894:ENST00000380003:exon5:c.A620G:p.N207S	Score=633;Name=lod=496	NA	9p21.2	NA	NA	NA	NA	rs17769294	0.05	0.05	0.039	0.0491214	0.1083	0.001	0.0735	0.0189	0.0613	0.11	NA	0.07	0.02	0.1043	0.13	.	.	0.0	B	0.003	B	0.000	D	0.000	P	1.7	L	0.96	T	-1.083	T	0.001	T	0.048	2.602	14.66	4.95	2.330	1.986	9.708	2.602228	2.602228	0.07	0.126192	0.034044	NA	0.087	NA	11.9945414
455	3	40085760	40085760	G	A	exonic	MYRIP	NA	synonymous SNV	MYRIP:NM_015460:exon3:c.G330A:p.A110A	exonic	ENSG00000170011	NA	nonsynonymous SNV	ENSG00000170011:ENST00000396217:exon3:c.G200A:p.R67Q	Score=489;Name=lod=129	NA	3p22.1	Score=797;Name=V$COMP1_01	Name=FOXA1_(C-20)	NA	NA	rs56248790	0.0027	0.0027	NA	0.00219649	0.006	NA	0.0029	NA	0.0031	0.01	NA	0.0028	NA	0.0022	0.01	.	.	0.017	B	0.002	B	.	.	1.000	D	.	.	2.0	T	-1.012	T	0.018	T	.	2.746	15.14	-10.9	-2.763	0.008	12.247	2.745583	2.745583	0.02	0.002209	0.001135	NA	NA	NA	11.989591
456	10	73550969	73550969	G	A	exonic	CDH23	NA	nonsynonymous SNV	CDH23:NM_022124:exon45:c.G6130A:p.E2044K	exonic	ENSG00000107736	NA	nonsynonymous SNV	ENSG00000107736:ENST00000224721:exon46:c.G6145A:p.E2049K	Score=493;Name=lod=134	NA	10q22.1	NA	NA	NA	NA	rs10466026	0.35	0.35	0.324	0.332668	0.2763	0.5288	0.3473	0.261	0.2751	0.27	0.52	0.3	0.29	0.3111	0.52	0.78	T	0.635	P	0.32	B	0.002	N	0.000	P	-0.665	N	.	.	-1.032	T	0.000	T	0.232	4.131	21.3	5.91	2.793	2.222	11.484	4.130608	4.130608	1	0.262925	0.270473	ID=COSM146953;OCCURENCE=1(stomach),1(large_intestine)	0.333	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000039237.1|RCV000124202.1;CLNDSDB=.|.;CLNDSDBID=.|.	11.9830084
456	10	102056745	102056745	C	T	exonic	PKD2L1	NA	nonsynonymous SNV	PKD2L1:NM_001253837:exon6:c.G1036A:p.V346I,PKD2L1:NM_016112:exon6:c.G1177A:p.V393I	exonic	ENSG00000107593	NA	nonsynonymous SNV	ENSG00000107593:ENST00000338519:exon5:c.G952A:p.V318I,ENSG00000107593:ENST00000318222:exon6:c.G1177A:p.V393I,ENSG00000107593:ENST00000353274:exon6:c.G1177A:p.V393I	Score=537;Name=lod=203	NA	10q24.31	Score=923;Name=V$TCF11_01	NA	NA	NA	rs2278842	0.12	0.12	0.104	0.119409	0.1193	0.1101	0.1542	0.1006	0.1299	0.11	0.11	0.15	0.09	0.1191	0.15	1	T	0.067	B	0.058	B	0.004	N	0.000	P	0.3	N	-0.11	T	-1.096	T	0.001	T	0.244	1.449	10.79	4.04	1.439	1.178	12.735	1.449311	1.449311	0.5	0.112093	0.088289	NA	0.065	NA	11.9828404
456	2	203765756	203765756	T	C	exonic	WDR12	NA	nonsynonymous SNV	WDR12:NM_018256:exon3:c.A223G:p.I75V	exonic	ENSG00000138442	NA	nonsynonymous SNV	ENSG00000138442:ENST00000261015:exon3:c.A223G:p.I75V	Score=652;Name=lod=594	NA	2q33.2	NA	NA	NA	NA	rs35212307	0.07	0.07	0.07	0.0459265	0.1302	0.0159	0.0735	0.0136	0.0143	0.14	0.02	0.09	0.01	0.0905	0.14	0.27	T	0.001	B	0.002	B	0.000	D	0.000	P	1.415	L	0.48	T	-1.082	T	0.001	T	0.148	3.045	16.16	4.69	2.224	6.288	11.315	3.045462	3.045462	0.21	0.129884	0.033818	NA	0.036	NA	11.9827494
456	19	41292601	41292601	A	T	exonic	RAB4B	NA	synonymous SNV	RAB4B:NM_016154:exon6:c.A462T:p.T154T	exonic	ENSG00000167578,ENSG00000171570	NA	nonsynonymous SNV	ENSG00000167578:ENST00000378307:exon5:c.A307T:p.R103W	NA	NA	19q13.2	NA	Name=ZNF263	NA	NA	rs35573002	0.05	0.05	0.054	0.0579073	NA	NA	0.0216	0.208	NA	NA	NA	0.03	0.22	0.0172	0.22	0	D	.	.	.	.	.	.	1.000	N	.	.	-0.7	T	-1.010	T	0.000	T	.	-0.077	3.626	-8.58	-2.342	-3.624	0.306	-0.07657	NA	0.01	0.000581	0.174762	NA	0.043	NA	11.982219
456	7	120969769	120969769	G	A	exonic	WNT16	NA	nonsynonymous SNV	WNT16:NM_016087:exon2:c.G214A:p.G72R,WNT16:NM_057168:exon2:c.G244A:p.G82R	exonic	ENSG00000002745	NA	nonsynonymous SNV	ENSG00000002745:ENST00000222462:exon2:c.G244A:p.G82R,ENSG00000002745:ENST00000361301:exon2:c.G214A:p.G72R	Score=535;Name=lod=199	Name=Bone mineral density	7q31.31	Score=834;Name=V$PAX4_01	Name=CTCF,Rad21,CTCF_(SC-5916),CTCF_(C-20)	Name=39	NA	rs2908004	0.48	0.48	0.481	0.510383	0.4433	0.1766	0.4092	0.9228	0.4376	0.44	0.18	0.44	0.93	0.4577	0.93	0.21	T	0.001	B	0.001	B	0.000	N	1.000	P	-1.435	N	-0.88	T	-0.938	T	0.000	T	0.099	1.98	12.58	-0.765	-0.608	1.051	12.157	1.980316	1.980316	0.39	0.455	0.837948	ID=COSM1599875,COSM1599876;OCCURENCE=1(central_nervous_system)	0.645	NA	11.9773334
456	5	147286013	147286013	A	T	exonic	C5orf46	NA	nonsynonymous SNV	C5orf46:NM_206966:exon1:c.T52A:p.F18I	exonic	ENSG00000178776	NA	nonsynonymous SNV	ENSG00000178776:ENST00000318315:exon1:c.T52A:p.F18I,ENSG00000178776:ENST00000515291:exon1:c.T52A:p.F18I	Score=369;Name=lod=42	NA	5q32	NA	Name=STAT3,GATA3_(SC-268),TBP	Name=78	NA	rs7722926	0.26	0.26	0.293	0.294529	0.0905	0.2232	0.147	0.6619	0.1861	0.09	0.22	0.15	0.66	0.1622	0.66	1	T	0.0	B	0.0	B	0.000	N	1.000	P	.	.	1.26	T	-0.920	T	0.000	T	0.09	0.22	5.187	3.7	0.443	1.300	5.768	0.220059	NA	1	0.104767	0.610304	NA	0.37	NA	11.9758664
457	11	101359750	101359750	G	A	exonic	TRPC6	NA	nonsynonymous SNV	TRPC6:NM_004621:exon4:c.C1211T:p.A404V	exonic	ENSG00000137672	NA	nonsynonymous SNV	ENSG00000137672:ENST00000344327:exon4:c.C1211T:p.A404V,ENSG00000137672:ENST00000532133:exon4:c.C1211T:p.A404V	Score=329;Name=lod=29	NA	11q22.1	NA	NA	NA	NA	rs36111323	0.07	0.07	0.075	0.0642971	0.1382	0.0268	0.0764	0.0023	0.1022	0.15	0.03	0.07	0.002	0.0986	0.15	0.63	T	1.0	D	0.997	D	0.000	N	0.000	P	1.5	L	-0.34	T	-0.971	T	0.003	T	0.221	2.406	14	3.92	0.815	4.690	12.471	2.405544	2.405544	0.18	0.121773	0.022696	NA	0.116	NA	11.9747604
457	16	84212779	84212779	G	A	exonic	TAF1C	NA	nonsynonymous SNV	TAF1C:NM_001243158:exon11:c.C1382T:p.P461L,TAF1C:NM_001243157:exon12:c.C1382T:p.P461L,TAF1C:NM_001243160:exon12:c.C947T:p.P316L,TAF1C:NM_001243159:exon14:c.C1151T:p.P384L,TAF1C:NM_005679:exon14:c.C2378T:p.P793L,TAF1C:NM_001243156:exon15:c.C2300T:p.P767L,TAF1C:NM_139353:exon15:c.C2096T:p.P699L	exonic	ENSG00000103168	NA	nonsynonymous SNV	ENSG00000103168:ENST00000570117:exon11:c.C1382T:p.P461L,ENSG00000103168:ENST00000378541:exon13:c.C2378T:p.P793L,ENSG00000103168:ENST00000567759:exon14:c.C2378T:p.P793L,ENSG00000103168:ENST00000341690:exon15:c.C2096T:p.P699L,ENSG00000103168:ENST00000541676:exon15:c.C2099T:p.P700L,ENSG00000103168:ENST00000566732:exon15:c.C2300T:p.P767L	NA	NA	16q24.1	Score=805;Name=V$OLF1_01	NA	NA	NA	rs2230131	0.14	0.14	0.151	0.158746	0.1103	0.1508	0.0648	0.208	0.2168	0.11	0.14	0.08	0.21	0.1574	0.21	0.01	D	0.381	B	0.067	B	0.081	N	1.000	P	1.95	M	4.24	T	-0.928	T	0.000	T	0.178	1.563	11.18	2.21	0.219	1.120	4.762	1.563138	1.563138	0.01	0.093575	0.195771	NA	0.145	NA	11.9720584
457	6	3010390	3010390	C	T	exonic	NQO2	NA	nonsynonymous SNV	NQO2:NM_000904:exon3:c.C139T:p.L47F	exonic	ENSG00000124588	NA	nonsynonymous SNV	ENSG00000124588:ENST00000380430:exon3:c.C139T:p.L47F,ENSG00000124588:ENST00000380454:exon3:c.C139T:p.L47F,ENSG00000124588:ENST00000380455:exon3:c.C139T:p.L47F,ENSG00000124588:ENST00000380441:exon4:c.C139T:p.L47F,ENSG00000124588:ENST00000380472:exon4:c.C139T:p.L47F,ENSG00000124588:ENST00000397717:exon4:c.C139T:p.L47F,ENSG00000124588:ENST00000426637:exon5:c.C139T:p.L47F,ENSG00000124588:ENST00000338130:exon6:c.C139T:p.L47F	Score=419;Name=lod=67	NA	6p25.2	Score=876;Name=V$COUP_01	Name=FOSL2,JunD,HNF4A_(H-171)	Name=25	NA	rs1143684	0.8	0.8	0.799	0.797524	0.7893	0.6558	0.768	0.9849	0.7198	0.8	0.67	0.77	0.98	0.7906	0.98	1	T	0.001	B	0.002	B	0.000	N	1.000	P	-3.395	N	3.34	T	-0.962	T	0.001	T	0.262	-0.65	1.141	5.63	0.967	5.048	9.689	-0.649564	NA	1	0.782326	0.960962	NA	0.812	NA	11.9711074
457	6	29911228	29911228	A	C	exonic	HLA-A	NA	nonsynonymous SNV	HLA-A:NM_001242758:exon3:c.A527C:p.E176A,HLA-A:NM_002116:exon3:c.A527C:p.E176A	exonic	ENSG00000206503	NA	nonsynonymous SNV	ENSG00000206503:ENST00000376802:exon3:c.A527C:p.E176A,ENSG00000206503:ENST00000376806:exon3:c.A527C:p.E176A,ENSG00000206503:ENST00000376809:exon3:c.A527C:p.E176A,ENSG00000206503:ENST00000396634:exon5:c.A527C:p.E176A	NA	NA	6p22.1	NA	Name=Pol2-4H8	Name=10	NA	rs9256983	NA	NA	NA	0.189497	0.1819	0.2817	0.0879	0.0847	0.316	NA	NA	NA	NA	0.1836	0.17	0.39	T	0.0	B	0.003	B	0.003	N	1.000	N	0.29	N	9.59	T	-0.859	T	0.000	T	0.344	-1.396	0.023	-7.56	-7.540	1.149	8.368	-1.395936	NA	0.52	NA	NA	NA	0.203	NA	11.9678334
458	1	183201970	183201970	G	C	exonic	LAMC2	NA	nonsynonymous SNV	LAMC2:NM_005562:exon14:c.G2198C:p.S733T,LAMC2:NM_018891:exon14:c.G2198C:p.S733T	exonic	ENSG00000058085	NA	nonsynonymous SNV	ENSG00000058085:ENST00000264144:exon14:c.G2198C:p.S733T,ENSG00000058085:ENST00000493293:exon14:c.G2198C:p.S733T	NA	NA	1q25.3	Score=798;Name=V$ISRE_01	NA	Name=4	NA	rs2296303	0.15	0.15	0.144	0.144968	0.1024	0.1468	0.1556	0.2186	0.0798	0.11	0.16	0.15	0.22	0.1384	0.23	0.4	T	0.244	B	0.169	B	0.000	D	0.937	P	2.075	M	2.47	T	-0.984	T	0.000	T	0.06	0.455	6.469	1.73	0.063	1.207	6.354	0.454627	NA	0.04	0.128721	0.226282	NA	0.123	NA	11.9638124
458	15	44943757	44943757	A	G	exonic	SPG11	NA	nonsynonymous SNV	SPG11:NM_001160227:exon6:c.T1388C:p.F463S,SPG11:NM_025137:exon6:c.T1388C:p.F463S	exonic	ENSG00000104133	NA	nonsynonymous SNV	ENSG00000104133:ENST00000557866:exon1:c.T86C:p.F29S,ENSG00000104133:ENST00000261866:exon6:c.T1388C:p.F463S,ENSG00000104133:ENST00000427534:exon6:c.T1388C:p.F463S,ENSG00000104133:ENST00000535302:exon6:c.T1388C:p.F463S,ENSG00000104133:ENST00000558319:exon6:c.T1388C:p.F463S,ENSG00000104133:ENST00000559193:exon6:c.T1388C:p.F463S	NA	NA	15q21.1	Score=813;Name=V$GFI1_01	NA	NA	NA	rs3759871	0.49	0.49	0.489	0.47484	0.4513	0.4653	0.5893	0.5234	0.362	0.44	0.49	0.57	0.52	0.4659	0.57	0.33	T	0.066	B	0.022	B	0.001	D	1.000	P	1.61	L	-0.73	T	-0.903	T	0.000	T	0.418	1.234	10.01	4.93	1.092	1.226	3.101	1.234381	1.234381	0.4	0.455677	0.525478	ID=COSM147894;OCCURENCE=1(stomach)	0.449	CLINSIG=non-pathogenic|probable-non-pathogenic;CLNDBN=Spastic_paraplegia_11\x2c_autosomal_recessive|not_specified;CLNREVSTAT=single|single;CLNACC=RCV000034172.2|RCV000118403.2;CLNDSDB=GeneReviews:MedGen:OMIM|.;CLNDSDBID=NBK1210:C1858479:604360|.	11.9604564
458	6	29912348	29912348	A	G	exonic	HLA-A	NA	nonsynonymous SNV	HLA-A:NM_001242758:exon5:c.A967G:p.T323A,HLA-A:NM_002116:exon5:c.A967G:p.T323A	exonic	ENSG00000206503	NA	nonsynonymous SNV	ENSG00000206503:ENST00000376806:exon5:c.A967G:p.T323A,ENSG00000206503:ENST00000376809:exon5:c.A967G:p.T323A,ENSG00000206503:ENST00000396634:exon7:c.A967G:p.T323A	NA	NA	6p22.1	NA	Name=Pol2-4H8,Pol2	NA	NA	rs1137078	0.24	0.24	0.206	0.257987	0.1769	0.1984	0.2305	0.3994	0.2311	0.16	0.21	0.24	0.4	0.198	0.4	0	D	0.0	B	0.002	B	0.843	U	1.000	P	1.375	L	6.02	T	-0.962	T	0.001	T	0.208	-0.183	3.109	-6.18	-1.981	-1.200	5.305	-0.183024	NA	0.12	NA	NA	NA	0.08	NA	11.9584334
458	11	47370041	47370041	T	C	exonic	MYBPC3	NA	nonsynonymous SNV	MYBPC3:NM_000256:exon6:c.A706G:p.S236G	exonic	ENSG00000134571	NA	nonsynonymous SNV	ENSG00000134571:ENST00000256993:exon6:c.A706G:p.S236G,ENSG00000134571:ENST00000399249:exon6:c.A706G:p.S236G,ENSG00000134571:ENST00000544791:exon6:c.A706G:p.S236G,ENSG00000134571:ENST00000545968:exon6:c.A706G:p.S236G	Score=591;Name=lod=336	NA	11p11.2	NA	NA	NA	NA	rs3729989	0.09	0.09	0.085	0.0670927	0.1412	0.0268	0.0836	0.0431	0.0532	0.14	0.02	0.1	0.07	0.1079	0.14	1	T	0.0	B	0.0	B	.	.	0.999	P	-1.655	N	-0.3	T	-1.055	T	0.001	T	0.048	0.063	4.342	5.12	1.170	2.559	13.832	0.062968	NA	1	0.126281	0.057397	NA	0.072	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=mult|single;CLNACC=RCV000035662.2|RCV000126920.1;CLNDSDB=.|.;CLNDSDBID=.|.	11.9579524
459	17	12915009	12915009	G	A	exonic	ELAC2	NA	nonsynonymous SNV	ELAC2:NM_018127:exon7:c.C650T:p.S217L,ELAC2:NM_173717:exon7:c.C650T:p.S217L	exonic	ENSG00000006744	NA	nonsynonymous SNV	ENSG00000006744:ENST00000338034:exon7:c.C650T:p.S217L,ENSG00000006744:ENST00000395962:exon7:c.C593T:p.S198L,ENSG00000006744:ENST00000581499:exon7:c.C368T:p.S123L	NA	NA	17p12	NA	NA	NA	NA	rs4792311	0.21	0.21	0.205	0.214457	0.3151	0.0347	0.245	0.233	0.2495	0.33	0.03	0.23	0.21	0.2711	0.33	0.63	T	0.688	P	0.107	B	0.066	N	1.000	P	1.995	M	-0.16	T	-1.000	T	0.000	T	0.373	1.146	9.668	3.23	1.372	3.696	8.053	1.146016	NA	0.07	0.296744	0.23468	NA	0.21	CLINSIG=pathogenic;CLNDBN=Prostate_cancer\x2c_hereditary\x2c_2;CLNREVSTAT=single;CLNACC=RCV000005358.1;CLNDSDB=MedGen:OMIM:Orphanet;CLNDSDBID=CN130472:614731:ORPHA1331	11.9503894
459	3	57542173	57542173	C	T	exonic	PDE12	NA	nonsynonymous SNV	PDE12:NM_177966:exon1:c.C67T:p.R23W	exonic	ENSG00000174840	NA	nonsynonymous SNV	ENSG00000174840:ENST00000311180:exon1:c.C67T:p.R23W,ENSG00000174840:ENST00000487257:exon1:c.C67T:p.R23W	NA	NA	3p14.3	NA	Name=Pol2(phosphoS2),YY1,Pol2,Mxi1_(bHLH),Pol2-4H8,YY1_(C-20),GATA-1,Pol2(b),TAF1,HEY1	Name=148	NA	rs2241988	0.39	0.39	0.401	0.387979	0.4722	0.4306	0.451	0.1437	0.5429	0.47	0.42	0.47	0.15	0.4723	0.47	0.06	T	0.987	D	0.431	B	0.020	N	0.991	P	1.245	L	1.78	T	-0.889	T	0.000	T	0.088	1.752	11.82	3.66	2.641	3.766	10.908	1.751894	1.751894	0.02	0.440634	0.182749	NA	0.377	NA	11.9481994
460	2	207041053	207041053	T	C	exonic	GPR1	NA	nonsynonymous SNV	GPR1:NM_001098199:exon3:c.A919G:p.I307V,GPR1:NM_001261454:exon3:c.A919G:p.I307V,GPR1:NM_001261455:exon3:c.A919G:p.I307V,GPR1:NM_005279:exon3:c.A919G:p.I307V,GPR1:NM_001261452:exon4:c.A919G:p.I307V,GPR1:NM_001261453:exon4:c.A919G:p.I307V	exonic	ENSG00000183671	NA	nonsynonymous SNV	ENSG00000183671:ENST00000407325:exon3:c.A919G:p.I307V,ENSG00000183671:ENST00000437420:exon4:c.A919G:p.I307V	Score=549;Name=lod=227	NA	2q33.3	NA	NA	Name=41	NA	rs3732083	0.47	0.47	0.46	0.46246	0.4831	0.2579	0.5735	0.6483	0.3221	0.49	0.25	0.58	0.63	0.458	0.63	0.21	T	0.08	B	0.011	B	0.000	D	0.015	P	0	N	1.24	T	-0.979	T	0.000	T	0.111	1.325	10.35	5.7	2.177	3.455	12.485	1.32518	1.32518	0.27	0.45	0.630958	NA	0.464	NA	11.9422334
460	7	90001496	90001496	G	C	exonic	GTPBP10	NA	nonsynonymous SNV	GTPBP10:NM_001042717:exon3:c.G255C:p.L85F,GTPBP10:NM_033107:exon5:c.G492C:p.L164F	exonic	ENSG00000105793	NA	nonsynonymous SNV	ENSG00000105793:ENST00000257659:exon3:c.G255C:p.L85F,ENSG00000105793:ENST00000380058:exon4:c.G347C:p.C116S,ENSG00000105793:ENST00000453512:exon4:c.G320C:p.C107S,ENSG00000105793:ENST00000222511:exon5:c.G492C:p.L164F,ENSG00000105793:ENST00000426366:exon5:c.G465C:p.L155F,ENSG00000105793:ENST00000450619:exon6:c.G543C:p.L181F	Score=547;Name=lod=223	NA	7q21.13	NA	NA	NA	NA	rs35001814	0.06	0.06	0.06	0.0505192	0.1302	0.002	0.0965	0.0068	0.045	0.12	NA	0.11	0.01	0.1109	0.15	.	.	1.0	D	0.999	D	0.000	D	0.000	P	1.575	L	1.34	T	-1.093	T	0.001	T	0.432	2.366	13.87	1.58	0.399	1.259	11.810	2.366126	2.366126	0	0.150151	0.029505	NA	0.08	NA	11.9420824
460	16	28513403	28513403	A	G	exonic	IL27	NA	nonsynonymous SNV	IL27:NM_145659:exon4:c.T356C:p.L119P	exonic	ENSG00000197272	NA	nonsynonymous SNV	ENSG00000197272:ENST00000356897:exon4:c.T356C:p.L119P	NA	NA	16p11.2	NA	NA	NA	NA	rs181206	0.18	0.18	0.149	0.159944	0.2873	0.0833	0.3501	0.0151	0.1687	0.3	0.1	0.27	0.02	0.2851	0.32	0.01	D	0.99	D	0.836	P	0.383	N	1.000	P	1.245	L	1.13	T	-1.014	T	0.000	T	0.322	2.471	14.22	2.97	1.600	1.753	6.393	2.471119	2.471119	0.09	0.320116	0.072827	NA	0.13	NA	11.9408174
460	2	201736166	201736166	A	C	exonic	PPIL3	NA	nonsynonymous SNV	PPIL3:NM_032472:exon7:c.T450G:p.D150E,PPIL3:NM_130906:exon7:c.T438G:p.D146E	exonic	ENSG00000240344	NA	nonsynonymous SNV	ENSG00000240344:ENST00000409264:exon6:c.T495G:p.D165E,ENSG00000240344:ENST00000286175:exon7:c.T450G:p.D150E,ENSG00000240344:ENST00000392283:exon7:c.T438G:p.D146E,ENSG00000240344:ENST00000409361:exon7:c.T426G:p.D142E,ENSG00000240344:ENST00000409449:exon7:c.T450G:p.D150E	Score=592;Name=lod=338	NA	2q33.1	Score=880;Name=V$OCT1_03	Name=JunD,CEBPB	Name=26	NA	rs7562391	0.17	0.17	0.204	0.176118	0.1441	0.0139	0.1268	0.4523	0.0378	0.15	0.0035	0.12	0.41	0.1228	0.41	0.69	T	0.001	B	0.004	B	0.000	D	0.000	P	0.4	N	0.9	T	-0.919	T	0.000	T	0.086	0.977	8.989	1.14	0.509	0.345	6.039	0.977153	NA	0.55	0.127907	0.371993	NA	0.196	NA	11.9385264
461	5	141019830	141019830	C	G	exonic	RELL2	NA	nonsynonymous SNV	RELL2:NM_173828:exon5:c.C847G:p.Q283E,RELL2:NM_001130029:exon6:c.C847G:p.Q283E	exonic	ENSG00000164620	NA	nonsynonymous SNV	ENSG00000164620:ENST00000297164:exon5:c.C847G:p.Q283E,ENSG00000164620:ENST00000518856:exon5:c.C649G:p.Q217E,ENSG00000164620:ENST00000521367:exon5:c.C649G:p.Q217E,ENSG00000164620:ENST00000444782:exon6:c.C847G:p.Q283E	Score=440;Name=lod=82	NA	5q31.3	NA	NA	NA	NA	rs11742646	0.16	0.16	0.159	NA	NA	NA	NA	NA	NA	0.17	0.13	0.22	0.14	0.2028	0.22	0.35	T	0.073	B	0.037	B	0.000	D	0.000	P	0.805	L	2.43	T	-0.954	T	0.000	T	0.104	1.803	11.99	4.66	1.312	2.418	12.254	1.802654	1.802654	0.17	0.19686	0.139128	NA	0.116	NA	11.9336734
461	17	15217437	15217437	C	G	exonic	TEKT3	NA	nonsynonymous SNV	TEKT3:NM_031898:exon6:c.G845C:p.G282A	exonic	ENSG00000125409	NA	nonsynonymous SNV	ENSG00000125409:ENST00000338696:exon5:c.G845C:p.G282A,ENSG00000125409:ENST00000395930:exon6:c.G845C:p.G282A,ENSG00000125409:ENST00000539245:exon7:c.G347C:p.G116A	Score=403;Name=lod=58	NA	17p12	Score=780;Name=V$STAT3_01	NA	NA	NA	rs230898	0.42	0.42	0.392	0.427516	0.4652	0.4732	0.3919	0.2927	0.5491	0.5	0.47	0.39	0.25	0.4566	0.5	0.61	T	0.001	B	0.004	B	0.000	D	0.128	P	0.65	N	4.34	T	-0.938	T	0.000	T	0.336	1.833	12.09	5.43	2.549	5.786	14.451	1.832668	1.832668	0.28	0.481047	0.326146	NA	0.478	NA	11.9304864
461	19	13409696	13409696	C	G	exonic	CACNA1A	NA	nonsynonymous SNV	CACNA1A:NM_001127221:exon19:c.G2754C:p.E918D,CACNA1A:NM_001127222:exon19:c.G2751C:p.E917D	exonic	ENSG00000141837	NA	nonsynonymous SNV	ENSG00000141837:ENST00000360228:exon19:c.G2751C:p.E917D,ENSG00000141837:ENST00000573710:exon19:c.G2754C:p.E918D	Score=300;Name=lod=22	NA	19p13.2	Score=775;Name=V$PAX5_02	NA	Name=2	NA	rs16022	0.11	0.11	0.117	0.105831	0.1471	0.1171	0.1254	0.0605	0.0992	0.14	0.12	0.12	0.05	0.1435	0.14	0.27	T	0.115	B	0.056	B	0.000	N	0.001	P	-0.345	N	-3.96	D	-0.491	T	0.017	T	0.039	-0.269	2.711	1.49	0.091	0.109	5.84	-0.268795	NA	0.37	0.116032	0.058489	ID=COSM329213,COSM329212,COSM329211;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.014	CLINSIG=untested|probable-non-pathogenic;CLNDBN=not_provided|not_specified;CLNREVSTAT=not|single;CLNACC=RCV000059296.1|RCV000116520.2;CLNDSDB=.|.;CLNDSDBID=.|.	11.9267014
462	7	143632618	143632618	C	T	exonic	OR2F2	NA	nonsynonymous SNV	OR2F2:NM_001004685:exon1:c.C293T:p.A98V	exonic	ENSG00000221910	NA	nonsynonymous SNV	ENSG00000221910:ENST00000408955:exon1:c.C293T:p.A98V	Score=363;Name=lod=40	NA	7q35	NA	NA	NA	NA	rs2240359	0.46	0.46	0.46	0.435304	0.2783	0.5397	0.4006	0.6974	0.1595	0.27	0.53	0.43	0.69	0.3414	0.69	1	T	0.732	P	0.16	B	0.000	D	0.553	P	0.41	N	5.93	T	-1.167	T	0.000	T	0.099	0.1	4.54	3.66	2.048	2.487	7.147	0.100329	NA	1	0.291017	0.625965	NA	0.428	NA	11.9226164
462	16	69221510	69221510	C	G	exonic	SNTB2	NA	synonymous SNV	SNTB2:NM_006750:exon1:c.C441G:p.P147P	exonic	ENSG00000168807	NA	synonymous SNV	ENSG00000168807:ENST00000336278:exon1:c.C441G:p.P147P,ENSG00000168807:ENST00000467311:exon1:c.C441G:p.P147P	Score=686;Name=lod=820	NA	16q22.1	Score=851;Name=V$IK1_01	Name=TCF4,Pol2,GATA3_(SC-268),E2F6_(H-50),EBF1_(C-8),CEBPB,GATA-2,HA-E2F1,AP-2gamma,c-Myc	Name=133	NA	rs10650	0.18	0.18	0.125	0.180711	0.2296	0.0417	0.1671	0.3003	0.1217	0.22	0.05	0.17	0.29	0.2966	0.29	0	D	.	.	.	.	0.000	N	0.000	P	.	.	1.49	T	-1.035	T	0.000	T	.	2.138	13.11	2.86	0.564	0.499	8.631	2.137905	2.137905	NA	0.218184	0.264106	NA	0.007	NA	11.9222826
462	12	10588530	10588530	C	G	exonic	KLRC2	NA	nonsynonymous SNV	KLRC2:NM_002260:exon1:c.G56C:p.R19P	exonic	ENSG00000205809,ENSG00000255641	NA	nonsynonymous SNV	ENSG00000205809:ENST00000381901:exon1:c.G56C:p.R19P,ENSG00000205809:ENST00000381902:exon1:c.G56C:p.R19P,ENSG00000255641:ENST00000539033:exon1:c.G56C:p.R19P	NA	NA	12p13.2	NA	Name=STAT1,TCF4,p300_(N-15),TBP,IRF3,c-Fos	Name=54	NA	rs34195537	0.26	0.26	0.269	NA	NA	NA	NA	NA	NA	0.3	0.25	0.32	0.14	0.4118	0.32	0.01	D	0.999	D	0.971	D	0.109	N	1.000	N	1.9	L	3.36	T	-0.904	T	0.000	T	0.275	1.675	11.56	-0.058	-0.169	-0.155	4.909	1.674672	1.674672	0.02	NA	NA	ID=COSM1628343;OCCURENCE=1(liver)	NA	NA	11.9215334
462	1	211840498	211840498	T	C	exonic	NEK2	NA	nonsynonymous SNV	NEK2:NM_001204182:exon7:c.A1061G:p.N354S,NEK2:NM_001204183:exon7:c.A1061G:p.N354S,NEK2:NM_002497:exon7:c.A1061G:p.N354S	exonic	ENSG00000117650	NA	nonsynonymous SNV	ENSG00000117650:ENST00000366998:exon7:c.A1061G:p.N354S,ENSG00000117650:ENST00000366999:exon7:c.A1061G:p.N354S,ENSG00000117650:ENST00000540251:exon8:c.A932G:p.N311S	Score=426;Name=lod=72	NA	1q32.3	NA	NA	NA	NA	rs2230489	0.17	0.17	0.157	0.172324	0.1282	0.2242	0.2061	0.1778	0.1329	0.13	0.24	0.17	0.17	0.1526	0.24	0.43	T	0.002	B	0.003	B	0.000	D	0.007	P	1.43	L	1.25	T	-1.030	T	0.000	T	0.04	1.874	12.22	4.89	1.964	1.120	9.121	1.874092	1.874092	0.15	0.131512	0.16296	NA	0.123	NA	11.9210214
462	5	149006640	149006640	C	T	exonic	ARHGEF37	NA	nonsynonymous SNV	ARHGEF37:NM_001001669:exon11:c.C1466T:p.P489L	exonic	ENSG00000183111	NA	nonsynonymous SNV	ENSG00000183111:ENST00000333677:exon11:c.C1466T:p.P489L	Score=378;Name=lod=46	NA	5q32	NA	NA	NA	NA	rs9324624	0.4	0.4	0.426	0.375599	0.5109	0.1706	0.3617	0.4871	0.3067	0.5	0.16	0.4	0.54	0.4193	0.54	0.06	T	1.0	D	0.963	D	0.005	N	0.000	P	1.795	L	0.45	T	-0.886	T	0.000	T	0.094	3.945	20.2	4.53	1.281	5.321	12.358	3.944542	3.944542	0.15	0.484201	0.458881	NA	0.543	NA	11.9189324
463	16	88908306	88908306	G	A	exonic	GALNS	NA	synonymous SNV	GALNS:NM_000512:exon3:c.C318T:p.N106N	exonic	ENSG00000141012	NA	nonsynonymous SNV	ENSG00000141012:ENST00000567525:exon2:c.C143T:p.T48M	Score=420;Name=lod=68	NA	16q24.3	NA	NA	NA	NA	rs34278797	0.02	0.02	0.014	0.0115815	0.0368	NA	0.0216	0.0015	0.0041	0.03	NA	0.03	0.0041	0.0218	0.031	0	D	.	.	.	.	.	.	1.000	D	.	.	.	.	-0.505	T	0.142	T	.	1.551	11.14	-2.82	-0.434	-1.237	13.413	1.551197	1.551197	0	0.030705	0.006378	NA	NA	NA	11.910695
463	5	43039793	43039793	T	C	exonic	ANXA2R	NA	nonsynonymous SNV	ANXA2R:NM_001014279:exon1:c.A356G:p.Q119R	exonic	ENSG00000177721	NA	nonsynonymous SNV	ENSG00000177721:ENST00000314890:exon2:c.A356G:p.Q119R	NA	NA	5p12	NA	Name=CTCF,NFKB,ELF1_(SC-631),c-Myc,GR,TCF4,Pol2,HA-E2F1,YY1_(C-20),Sin3Ak-20	Name=146	NA	rs1054428	0.2	0.2	0.166	0.183506	0.334	0.0089	0.3487	0.115	0.184	0.32	0.01	0.36	0.11	0.2673	0.36	0.3	T	0.994	D	0.81	P	.	.	1.000	P	0.975	L	1.47	T	-1.097	T	0.000	T	0.049	1.34	10.4	-6.01	-2.514	-0.215	1.570	1.34023	1.34023	0.25	0.326977	0.149796	NA	0.21	NA	11.9050564
464	9	95887320	95887320	G	T	exonic	NINJ1	NA	nonsynonymous SNV	NINJ1:NM_004148:exon3:c.C329A:p.A110D	exonic	ENSG00000131669	NA	nonsynonymous SNV	ENSG00000131669:ENST00000375446:exon3:c.C329A:p.A110D	Score=527;Name=lod=184	Name=Obesity (early onset extreme)	9q22.31	Score=783;Name=V$AHRARNT_02	NA	NA	NA	rs2275848	0.8	0.8	0.754	0.789137	0.8101	0.874	0.8775	0.6248	0.8395	0.8	0.89	0.86	0.63	0.805	0.89	0.54	T	0.936	P	0.799	P	0.000	D	0.001	P	1.15	L	0.97	T	-1.030	T	0.000	T	0.059	2.785	15.27	2.51	0.571	1.597	12.090	2.785166	2.785166	0.39	0.813953	0.676577	NA	0.783	NA	11.9042804
465	17	66538239	66538239	G	T	exonic	FAM20A	NA	nonsynonymous SNV	FAM20A:NM_017565:exon7:c.C996A:p.N332K,FAM20A:NM_001243746:exon8:c.C582A:p.N194K	exonic	ENSG00000108950	NA	nonsynonymous SNV	ENSG00000108950:ENST00000592554:exon7:c.C996A:p.N332K	Score=446;Name=lod=87	NA	17q24.2	Score=928;Name=V$E47_01	NA	NA	NA	rs2302234	0.38	0.38	0.352	0.357827	0.3121	0.5446	0.4481	0.2716	0.2648	0.3	0.53	0.43	0.27	0.3236	0.53	0.79	T	0.811	P	0.341	B	0.003	N	0.000	P	0.965	L	.	.	-0.988	T	0.000	T	0.12	1.849	12.14	5.02	2.873	2.510	16.842	1.848673	1.848673	0.26	0.303023	0.274172	NA	0.413	NA	11.8946104
465	9	109689752	109689752	C	T	exonic	ZNF462	NA	nonsynonymous SNV	ZNF462:NM_021224:exon3:c.C3559T:p.P1187S	exonic	ENSG00000148143	NA	nonsynonymous SNV	ENSG00000148143:ENST00000374686:exon1:c.C208T:p.P70S,ENSG00000148143:ENST00000441147:exon1:c.C94T:p.P32S,ENSG00000148143:ENST00000277225:exon3:c.C3559T:p.P1187S,ENSG00000148143:ENST00000457913:exon3:c.C3559T:p.P1187S	Score=605;Name=lod=384	NA	9q31.2	NA	NA	NA	NA	rs3814541	0.1	0.1	0.091	0.103634	0.162	0.0794	0.0908	0.0151	0.1973	0.18	0.08	0.11	0.02	0.1331	0.18	0.14	T	0.062	B	0.046	B	0.000	D	0.000	P	1.87	L	3.93	T	-1.000	T	0.000	T	0.078	1.335	10.38	5.37	2.513	3.028	13.411	1.33508	1.33508	0	0.145698	0.030413	NA	0.101	NA	11.8925354
465	19	10129552	10129552	C	G	exonic	RDH8	NA	nonsynonymous SNV	RDH8:NM_015725:exon3:c.C468G:p.H156Q	exonic	ENSG00000080511	NA	nonsynonymous SNV	ENSG00000080511:ENST00000171214:exon3:c.C408G:p.H136Q,ENSG00000080511:ENST00000591589:exon3:c.C468G:p.H156Q	Score=519;Name=lod=171	NA	19p13.2	NA	NA	NA	NA	rs1122206	0.17	0.17	0.175	0.194289	0.1541	0.0853	0.1513	0.3381	0.184	0.15	0.09	0.14	0.34	0.1544	0.34	0.09	T	0.999	D	0.995	D	0.000	D	0.001	P	0.39	N	-3.18	D	-1.135	T	0.000	T	0.909	3.517	17.96	0.86	0.635	0.608	7.313	3.517049	3.517049	0.03	0.13407	0.303677	ID=COSM1130021;OCCURENCE=1(prostate)	0.203	NA	11.8907634
466	6	55142337	55142337	A	G	exonic	HCRTR2	NA	nonsynonymous SNV	HCRTR2:NM_001526:exon5:c.A922G:p.I308V	exonic	ENSG00000137252	NA	nonsynonymous SNV	ENSG00000137252:ENST00000370862:exon5:c.A922G:p.I308V	Score=656;Name=lod=618	NA	6p12.1	Score=727;Name=V$SEF1_C	NA	Name=11	Score=94;Name=2047481_0_+_94	rs2653349	0.87	0.87	0.87	0.878794	0.8161	0.9375	0.8761	0.8926	0.8661	0.81	0.94	0.87	0.88	0.8393	0.94	1	T	0.0	B	0.001	B	0.000	N	0.998	P	-0.545	N	1.36	T	-1.041	T	0.014	T	0.092	1.136	9.629	6.06	1.590	7.443	15.685	1.135918	NA	1	0.793605	0.884476	NA	0.891	NA	11.8843284
466	19	7573287	7573287	C	T	exonic	C19orf45	NA	nonsynonymous SNV	C19orf45:NM_198534:exon9:c.C1489T:p.P497S	exonic	ENSG00000198723	NA	nonsynonymous SNV	ENSG00000198723:ENST00000361664:exon9:c.C1489T:p.P497S	NA	NA	19p13.2	Score=812;Name=V$CDPCR3_01	NA	NA	NA	rs1133378	0.28	0.28	0.249	0.239217	0.337	0.1746	0.3285	0.1725	0.2321	0.35	0.2	0.37	0.2	0.2889	0.37	0.15	T	0.992	D	0.876	P	0.096	N	1.000	P	1.78	L	2.55	T	-0.905	T	0.000	T	0.166	3.24	16.86	3.62	2.325	1.017	11.066	3.239811	3.239811	0.13	0.331279	0.19119	NA	0.29	NA	11.8761544
466	6	29141632	29141632	T	C	exonic	OR2J2	NA	nonsynonymous SNV	OR2J2:NM_030905:exon1:c.T220C:p.Y74H	exonic	ENSG00000204700	NA	nonsynonymous SNV	ENSG00000204700:ENST00000377167:exon1:c.T220C:p.Y74H	Score=455;Name=lod=94	NA	6p22.1	NA	NA	NA	NA	rs3116855	0.36	0.36	0.313	0.316494	0.5149	0.3512	0.4035	0.0408	0.3875	0.54	0.35	0.41	0.04	0.4515	0.54	0.01	D	.	.	.	.	.	.	0.957	P	2.855	M	4.95	T	-1.071	T	0.009	T	0.05	1.637	11.43	2.3	1.039	2.328	9.076	1.636528	1.636528	0.03	0.491101	0.115731	NA	0.239	NA	11.8758324
467	1	241951329	241951329	C	T	exonic	WDR64	NA	nonsynonymous SNV	WDR64:NM_144625:exon23:c.C2854T:p.R952W	exonic	ENSG00000162843	NA	nonsynonymous SNV	ENSG00000162843:ENST00000414635:exon13:c.C1666T:p.R556W,ENSG00000162843:ENST00000472717:exon13:c.C1531T:p.R511W,ENSG00000162843:ENST00000437684:exon18:c.C2353T:p.R785W,ENSG00000162843:ENST00000366552:exon23:c.C2854T:p.R952W	NA	NA	1q43	Score=794;Name=V$COMP1_01	NA	NA	NA	rs12074374	0.13	0.13	0.122	0.11242	0.16	0.005	0.1254	0.2186	0.0215	0.15	0.0035	0.15	0.21	0.1326	0.21	0	D	1.0	D	0.928	D	0.047	N	0.545	P	1.87	L	1.17	T	-1.091	T	0.000	T	0.359	3.271	16.98	2.8	0.339	0.373	9.375	3.271363	3.271363	0	0.168605	0.214253	NA	0.21	NA	11.8721284
468	19	49377918	49377918	G	T	exonic	PPP1R15A	NA	nonsynonymous SNV	PPP1R15A:NM_014330:exon2:c.G1428T:p.R476S	exonic	ENSG00000087074	NA	nonsynonymous SNV	ENSG00000087074:ENST00000200453:exon2:c.G1428T:p.R476S	NA	NA	19q13.33	NA	Name=PU.1,Pol2,FOSL1_(SC-183),c-Fos,GATA-2,eGFP-JunB	Name=93	NA	rs35087747	0.09	0.09	0.083	0.0840655	0.164	0.003	0.0793	0.087	0.0849	0.16	0.0017	0.08	0.09	0.1281	0.18	1	T	0.0	B	0.0	B	0.776	N	1.000	P	-0.345	N	3.49	T	-0.981	T	0.000	T	0.017	-0.888	0.463	-5.56	-1.820	-2.597	3.004	-0.888184	NA	1	0.180116	0.131185	NA	0.138	NA	11.8611174
468	19	42213782	42213782	T	C	exonic	CEACAM5	NA	nonsynonymous SNV	CEACAM5:NM_004363:exon2:c.T248C:p.V83A	exonic	ENSG00000105388,ENSG00000267881	NA	nonsynonymous SNV	ENSG00000105388:ENST00000221992:exon2:c.T248C:p.V83A,ENSG00000105388:ENST00000398599:exon2:c.T248C:p.V83A,ENSG00000105388:ENST00000405816:exon2:c.T248C:p.V83A,ENSG00000267881:ENST00000598976:exon2:c.T248C:p.V83A	NA	NA	19q13.2	Score=823;Name=V$E4BP4_01	NA	NA	NA	rs28683503	0.14	0.14	0.132	0.16234	0.1958	NA	0.1037	0.3949	0.0225	0.17	NA	0.11	0.27	0.1443	0.31	0.11	T	0.016	B	0.084	B	.	.	1.000	P	2.035	M	-0.27	T	-0.979	T	0.000	T	0.066	-0.036	3.83	-4.68	-1.374	-2.465	1.288	-0.035887	NA	0	0.132442	0.305266	NA	0.232	NA	11.8607914
468	19	51918135	51918135	G	T	exonic	SIGLEC10	NA	nonsynonymous SNV	SIGLEC10:NM_001171156:exon8:c.C1384A:p.R462S,SIGLEC10:NM_033130:exon8:c.C1558A:p.R520S	exonic	ENSG00000142512	NA	nonsynonymous SNV	ENSG00000142512:ENST00000339313:exon8:c.C1558A:p.R520S,ENSG00000142512:ENST00000356298:exon8:c.C1558A:p.R520S,ENSG00000142512:ENST00000439889:exon8:c.C1384A:p.R462S	Score=304;Name=lod=23	NA	19q13.41	Score=780;Name=V$HEN1_01	NA	NA	NA	rs1833785	0.21	0.21	0.212	0.243011	0.1501	0.2113	0.1974	0.3828	0.2147	0.15	0.19	0.18	0.36	0.1781	0.36	1	T	0.001	B	0.003	B	0.120	N	0.000	P	-1.57	N	-1.99	D	-1.056	T	0.000	T	0.057	-0.235	2.864	-2.29	-0.803	-0.988	11.809	-0.235411	NA	1	0.149221	0.345141	NA	0.232	NA	11.8559124
469	11	56468720	56468720	T	C	exonic	OR9G1,OR9G9	NA	nonsynonymous SNV	OR9G1:NM_001005213:exon1:c.T857C:p.L286P,OR9G9:NM_001013358:exon1:c.T857C:p.L286P	exonic	ENSG00000174914	NA	nonsynonymous SNV	ENSG00000174914:ENST00000312153:exon1:c.T857C:p.L286P	Score=519;Name=lod=171	NA	11q12.1	NA	NA	NA	NA	rs66943455	NA	NA	0.379	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4847	NA	1	T	0.0	B	0.0	B	0.000	N	0.954	D	-4.28	N	2.5	T	-0.886	T	0.004	T	0.3	-0.318	2.488	4.62	1.281	3.981	13.155	-0.31812	NA	1	NA	NA	NA	0.014	NA	11.8486334
469	3	46729757	46729757	C	G	exonic	ALS2CL	NA	nonsynonymous SNV	ALS2CL:NM_001190707:exon3:c.G133C:p.E45Q,ALS2CL:NM_147129:exon3:c.G133C:p.E45Q	exonic	ENSG00000178038	NA	nonsynonymous SNV	ENSG00000178038:ENST00000318962:exon3:c.G133C:p.E45Q,ENSG00000178038:ENST00000415953:exon3:c.G133C:p.E45Q,ENSG00000178038:ENST00000431015:exon3:c.G133C:p.E45Q,ENSG00000178038:ENST00000434140:exon3:c.G133C:p.E45Q,ENSG00000178038:ENST00000450172:exon3:c.G133C:p.E45Q	Score=243;Name=lod=13	NA	3p21.31	NA	NA	NA	NA	rs7642448	0.4	0.4	0.404	0.448482	0.3161	0.3046	0.3991	0.736	0.3793	0.31	0.28	0.4	0.68	0.3641	0.68	0.17	T	0.988	D	0.69	P	0.001	N	0.000	P	1.04	L	0.47	T	-0.955	T	0.000	T	0.099	1.704	11.66	4.36	2.413	3.504	12.567	1.703594	1.703594	0.08	0.307093	0.644349	NA	0.507	NA	11.8460404
470	6	150212003	150212003	C	T	exonic	RAET1E	NA	nonsynonymous SNV	RAET1E:NM_001243325:exon1:c.G35A:p.R12H,RAET1E:NM_001243327:exon1:c.G35A:p.R12H,RAET1E:NM_139165:exon1:c.G35A:p.R12H,RAET1E:NM_001243328:exon2:c.G35A:p.R12H	exonic	ENSG00000164520	NA	nonsynonymous SNV	ENSG00000164520:ENST00000357183:exon1:c.G35A:p.R12H,ENSG00000164520:ENST00000367363:exon1:c.G35A:p.R12H,ENSG00000164520:ENST00000392270:exon1:c.G35A:p.R12H,ENSG00000164520:ENST00000529948:exon1:c.G35A:p.R12H,ENSG00000164520:ENST00000532335:exon2:c.G35A:p.R12H,ENSG00000164520:ENST00000531073:exon3:c.G35A:p.R12H	NA	NA	6q25.1	NA	Name=Pol2,TBP	Name=23	NA	rs9383583	0.26	0.26	0.269	0.267772	0.1581	0.5526	0.1182	0.2209	0.2566	0.14	0.55	0.14	0.19	0.1931	0.55	0.39	T	0.001	B	0.001	B	.	.	1.000	P	-0.345	N	5.18	T	-0.965	T	0.007	T	0.334	0.328	5.78	-4.39	-2.414	-2.057	7.046	0.328267	NA	0	0.139535	0.222197	NA	0.261	NA	11.8425984
470	11	56468368	56468368	C	T	exonic	OR9G1,OR9G9	NA	nonsynonymous SNV	OR9G1:NM_001005213:exon1:c.C505T:p.R169C,OR9G9:NM_001013358:exon1:c.C505T:p.R169C	exonic	ENSG00000174914	NA	nonsynonymous SNV	ENSG00000174914:ENST00000312153:exon1:c.C505T:p.R169C	NA	NA	11q12.1	NA	NA	NA	NA	rs11228733	0.49	0.49	NA	0.000798722	NA	NA	0.0043	0.0008	NA	0.5	0.48	0.5	0.5	0.4946	0.5	0.02	D	0.782	P	0.67	P	0.086	N	1.000	N	2.235	M	1.17	T	-0.978	T	0.000	T	0.159	1.623	11.38	-6.62	-1.435	-0.527	9.083	1.622619	1.622619	0.02	NA	NA	NA	0.123	NA	11.8387334
471	19	35422808	35422808	C	T	exonic	ZNF30	NA	nonsynonymous SNV	ZNF30:NM_001099437:exon3:c.C71T:p.S24F,ZNF30:NM_001099438:exon3:c.C71T:p.S24F,ZNF30:NM_194325:exon3:c.C71T:p.S24F	exonic	ENSG00000168661	NA	nonsynonymous SNV	ENSG00000168661:ENST00000303586:exon3:c.C71T:p.S24F,ENSG00000168661:ENST00000439785:exon3:c.C71T:p.S24F,ENSG00000168661:ENST00000601142:exon3:c.C71T:p.S24F,ENSG00000168661:ENST00000601957:exon3:c.C71T:p.S24F	Score=361;Name=lod=39	NA	19q13.11	NA	NA	NA	NA	rs10422961	0.29	0.29	0.294	0.288139	0.3618	0.2202	0.232	0.2693	0.3476	0.37	0.24	0.26	0.26	0.3122	0.37	0.01	D	0.694	P	0.351	B	.	.	0.000	P	4.305	H	4.1	T	-1.044	T	0.000	T	0.195	1.637	11.43	1.55	1.167	1.149	6.571	1.63739	1.63739	0.02	0.324643	0.254064	ID=COSM1392764;OCCURENCE=1(large_intestine)	0.196	NA	11.8346904
471	11	48346961	48346961	A	T	exonic	OR4C3	NA	nonsynonymous SNV	OR4C3:NM_001004702:exon1:c.A469T:p.N157Y	exonic	ENSG00000176547	NA	nonsynonymous SNV	ENSG00000176547:ENST00000319856:exon1:c.A469T:p.N157Y	Score=557;Name=lod=244	NA	11p11.2	Score=861;Name=V$MRF2_01	NA	NA	NA	rs75493089	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4996	NA	1	T	0.0	B	0.0	B	0.006	N	0.771	N	-4.415	N	2.87	T	-0.987	T	0.003	T	0.192	-1.328	0.032	4.66	1.048	6.104	10.809	-1.328244	NA	1	NA	NA	NA	NA	NA	11.8337334
471	1	144868170	144868170	C	T	exonic	PDE4DIP	NA	nonsynonymous SNV	PDE4DIP:NM_001198834:exon33:c.G5269A:p.A1757T,PDE4DIP:NM_014644:exon33:c.G5269A:p.A1757T,PDE4DIP:NM_001198832:exon35:c.G4951A:p.A1651T	exonic	ENSG00000178104	NA	nonsynonymous SNV	ENSG00000178104:ENST00000369354:exon33:c.G5269A:p.A1757T,ENSG00000178104:ENST00000369356:exon33:c.G5269A:p.A1757T,ENSG00000178104:ENST00000313382:exon35:c.G4951A:p.A1651T,ENSG00000178104:ENST00000530740:exon35:c.G5524A:p.A1842T,ENSG00000178104:ENST00000369359:exon36:c.G5677A:p.A1893T	Score=336;Name=lod=31	NA	1q21.1	Score=843;Name=V$TAL1BETAE47_01	NA	Name=2	NA	rs1628310	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	0.44	T	0.034	B	0.022	B	.	.	1.000	D	0.55	N	4.88	T	-0.924	T	0.002	T	0.026	1.492	10.94	2.4	0.870	0.085	6.363	1.491553	1.491553	0.17	NA	NA	NA	0.5	NA	11.8333334
471	1	144871782	144871782	A	G	exonic	PDE4DIP	NA	nonsynonymous SNV	PDE4DIP:NM_001198834:exon32:c.T5180C:p.L1727P,PDE4DIP:NM_014644:exon32:c.T5180C:p.L1727P	exonic	ENSG00000178104	NA	nonsynonymous SNV	ENSG00000178104:ENST00000369354:exon32:c.T5180C:p.L1727P,ENSG00000178104:ENST00000369356:exon32:c.T5180C:p.L1727P,ENSG00000178104:ENST00000530740:exon34:c.T5435C:p.L1812P,ENSG00000178104:ENST00000369359:exon35:c.T5588C:p.L1863P	Score=550;Name=lod=230	NA	1q21.1	NA	NA	NA	NA	rs1778158	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	0.42	1	T	0.0	B	0.0	B	.	.	1.000	D	-1.935	N	4.86	T	-0.939	T	0.001	T	0.116	0.261	5.413	5.97	1.549	3.094	13.280	0.261421	NA	1	NA	NA	NA	0.384	NA	11.8333334
471	1	144917841	144917841	T	C	exonic	PDE4DIP	NA	nonsynonymous SNV	PDE4DIP:NM_001002811:exon7:c.A1934G:p.H645R,PDE4DIP:NM_001002812:exon11:c.A1445G:p.H482R,PDE4DIP:NM_001198834:exon11:c.A1445G:p.H482R,PDE4DIP:NM_014644:exon11:c.A1445G:p.H482R,PDE4DIP:NM_001198832:exon14:c.A1643G:p.H548R	exonic	ENSG00000178104	NA	nonsynonymous SNV	ENSG00000178104:ENST00000313431:exon7:c.A1934G:p.H645R,ENSG00000178104:ENST00000479408:exon7:c.A806G:p.H269R,ENSG00000178104:ENST00000529945:exon7:c.A1934G:p.H645R,ENSG00000178104:ENST00000369349:exon11:c.A1445G:p.H482R,ENSG00000178104:ENST00000369351:exon11:c.A1445G:p.H482R,ENSG00000178104:ENST00000369354:exon11:c.A1445G:p.H482R,ENSG00000178104:ENST00000369356:exon11:c.A1445G:p.H482R,ENSG00000178104:ENST00000313382:exon14:c.A1643G:p.H548R,ENSG00000178104:ENST00000369359:exon14:c.A1856G:p.H619R,ENSG00000178104:ENST00000530740:exon14:c.A1856G:p.H619R	Score=433;Name=lod=77	NA	1q21.1	NA	NA	NA	NA	rs1698681	0.5	0.5	0.49	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	0.64	T	0.053	B	0.058	B	.	.	1.000	D	-0.55	N	4.99	T	-1.036	T	0.041	T	0.227	1.128	9.599	4.59	2.215	2.822	10.02	1.128116	NA	0.11	NA	NA	NA	0.493	NA	11.8333334
471	1	144931392	144931392	G	A	exonic	PDE4DIP	NA	nonsynonymous SNV	PDE4DIP:NM_001002811:exon1:c.C317T:p.A106V	exonic	ENSG00000178104	NA	nonsynonymous SNV	ENSG00000178104:ENST00000313431:exon1:c.C317T:p.A106V,ENSG00000178104:ENST00000529945:exon1:c.C317T:p.A106V	NA	NA	1q21.1	NA	Name=c-Myc,PAX5-C20,ZNF263,HA-E2F1	Name=134	NA	rs2798893	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	0.32	T	0.036	B	0.01	B	.	.	0.994	N	0.14	N	2.67	T	-0.938	T	0.008	T	0.039	0.239	5.292	4.35	1.154	1.217	12.594	0.239266	NA	0.25	NA	NA	NA	0.5	NA	11.8333334
471	2	167273315	167273315	G	A	exonic	SCN7A	NA	nonsynonymous SNV	SCN7A:NM_002976:exon20:c.C3316T:p.R1106W	exonic	ENSG00000136546	NA	nonsynonymous SNV	ENSG00000136546:ENST00000409855:exon20:c.C3316T:p.R1106W	NA	NA	2q24.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00002591	NA	0	D	0.669	P	0.04	B	0.736	N	1.000	N	-0.625	N	-4.09	D	-0.293	T	0.632	D	0.15	0.416	6.26	0.442	0.172	0.805	16.370	0.416089	NA	0	NA	NA	NA	NA	NA	11.8333075
471	10	13340236	13340236	G	A	exonic	PHYH	NA	nonsynonymous SNV	PHYH:NM_006214:exon2:c.C85T:p.P29S	exonic	ENSG00000107537	NA	nonsynonymous SNV	ENSG00000107537:ENST00000263038:exon2:c.C85T:p.P29S,ENSG00000107537:ENST00000396920:exon2:c.C28T:p.P10S,ENSG00000107537:ENST00000479604:exon2:c.C85T:p.P29S	Score=272;Name=lod=17	NA	10p13	NA	NA	NA	NA	rs28938169	0.11	0.11	0.088	0.0976438	0.173	0.0238	0.0965	0.1165	0.0716	0.17	0.02	0.11	0.1	0.1504	0.18	0.49	T	0.156	B	0.029	B	0.007	N	0.000	P	1.825	L	-2.66	D	-0.883	T	0.004	T	0.306	0.939	8.826	3.26	0.542	2.237	9.816	0.938836	NA	0.07	0.177209	0.122333	NA	0.043	CLINSIG=non-pathogenic|probable-non-pathogenic;CLNDBN=not_provided|not_specified;CLNREVSTAT=single|single;CLNACC=RCV000008020.2|RCV000117911.2;CLNDSDB=.|.;CLNDSDBID=.|.	11.8327244
471	11	130275749	130275749	T	C	exonic	ADAMTS8	NA	nonsynonymous SNV	ADAMTS8:NM_007037:exon9:c.A2374G:p.T792A	exonic	ENSG00000134917	NA	nonsynonymous SNV	ENSG00000134917:ENST00000257359:exon9:c.A2374G:p.T792A	Score=429;Name=lod=74	NA	11q24.3	NA	NA	NA	NA	rs11222085	0.1	0.1	0.089	0.0838658	0.175	NA	0.2464	0.0129	0.0573	0.19	NA	0.21	0.01	0.1441	0.21	0.53	T	0.044	B	0.052	B	0.001	D	0.150	P	1.115	L	0.75	T	-1.047	T	0.000	T	0.051	0.887	8.604	5.34	2.018	0.973	9.408	0.887485	NA	0.02	0.181536	0.032099	NA	0.196	NA	11.8326974
471	1	1650787	1650787	T	C	exonic	CDK11A,CDK11B	NA	nonsynonymous SNV	CDK11A:NM_024011:exon4:c.A335G:p.H112R,CDK11B:NM_033486:exon4:c.A335G:p.H112R,CDK11B:NM_033489:exon5:c.A233G:p.H78R	exonic	ENSG00000008128	NA	nonsynonymous SNV	ENSG00000008128:ENST00000356200:exon3:c.A233G:p.H78R,ENSG00000008128:ENST00000509982:exon3:c.A335G:p.H112R,ENSG00000008128:ENST00000378638:exon4:c.A233G:p.H78R,ENSG00000008128:ENST00000404249:exon4:c.A335G:p.H112R,ENSG00000008128:ENST00000460465:exon4:c.A335G:p.H112R	Score=336;Name=lod=31	NA	1p36.33	NA	NA	NA	NA	rs1137003	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5011	0.5	1	T	0.001	B	0.002	B	.	.	1.000	D	.	.	3.6	T	-0.873	T	0.000	T	0.243	0.491	6.665	4.87	1.053	5.293	12.456	0.491257	NA	1	NA	NA	NA	0.116	NA	11.8322334
471	5	122685727	122685727	C	G	exonic	CEP120	NA	nonsynonymous SNV	CEP120:NM_001166226:exon19:c.G2559C:p.Q853H,CEP120:NM_153223:exon20:c.G2637C:p.Q879H	exonic	ENSG00000168944	NA	nonsynonymous SNV	ENSG00000168944:ENST00000306467:exon19:c.G2637C:p.Q879H,ENSG00000168944:ENST00000306481:exon19:c.G2559C:p.Q853H,ENSG00000168944:ENST00000328236:exon20:c.G2637C:p.Q879H	Score=615;Name=lod=423	NA	5q23.2	Score=788;Name=V$HEN1_01	NA	NA	NA	rs1047437	0.19	0.19	0.165	0.185304	0.1581	0.244	0.2147	0.118	0.2229	0.17	0.25	0.2	0.14	0.1774	0.25	0.37	T	0.0	B	0.001	B	0.011	U	0.000	P	-1.175	N	1.97	T	-0.941	T	0.000	T	0.034	1.329	10.36	2.59	1.371	2.127	4.583	1.329111	1.329111	1	0.165736	0.134135	NA	0.152	NA	11.8320974
471	1	75702736	75702736	C	A	exonic	SLC44A5	NA	nonsynonymous SNV	SLC44A5:NM_001130058:exon11:c.G676T:p.D226Y,SLC44A5:NM_152697:exon11:c.G676T:p.D226Y	exonic	ENSG00000137968	NA	nonsynonymous SNV	ENSG00000137968:ENST00000535611:exon8:c.G286T:p.D96Y,ENSG00000137968:ENST00000370855:exon11:c.G676T:p.D226Y,ENSG00000137968:ENST00000370859:exon11:c.G676T:p.D226Y	NA	NA	1p31.1	NA	NA	NA	NA	rs143251034	0.0009	0.0009	0.002	0.000399361	0.001	NA	0.0014	NA	NA	0.0013	NA	0.0028	NA	0.0004	0.0028	0	D	0.982	D	0.891	P	0.202	N	0.998	D	2.175	M	2.84	T	-1.038	T	0.045	T	0.374	1.643	11.45	-1.47	0.010	0.671	6.567	1.643121	1.643121	0.02	0.000116	0	NA	NA	NA	11.8318174
471	12	14976375	14976375	C	T	exonic	C12orf60	NA	nonsynonymous SNV	C12orf60:NM_175874:exon2:c.C506T:p.T169I	exonic	ENSG00000182993	NA	nonsynonymous SNV	ENSG00000182993:ENST00000330828:exon2:c.C506T:p.T169I	NA	NA	12p12.3	Score=1000;Name=V$AML1_01	NA	NA	NA	rs149459242	NA	NA	NA	0.000199681	0.001	NA	NA	NA	NA	NA	NA	NA	NA	0.0006	0.001	0.01	D	0.893	P	0.432	B	0.061	N	1.000	N	1.1	L	2.24	T	-1.060	T	0.032	T	0.186	1.469	10.86	2.37	1.185	0.673	4.778	1.468777	1.468777	0.04	0.001047	0.000681	NA	NA	NA	11.8306864
471	17	76433899	76433899	G	A	exonic	DNAH17	NA	nonsynonymous SNV	DNAH17:NM_173628:exon74:c.C11857T:p.H3953Y	exonic	ENSG00000187775	NA	nonsynonymous SNV	ENSG00000187775:ENST00000389840:exon74:c.C11839T:p.H3947Y,ENSG00000187775:ENST00000585328:exon74:c.C11842T:p.H3948Y	Score=467;Name=lod=105	NA	17q25.3	NA	NA	NA	NA	rs61742072	0.13	0.13	0.093	0.105831	0.1889	0.1012	0.1095	0.0257	0.1309	0.19	0.1	0.13	0.06	0.1465	0.19	0.23	T	0.0	B	0.0	B	0.000	D	1.000	P	1.36	L	3.11	T	-0.971	T	0.000	T	0.066	1.912	12.35	2.96	1.112	2.564	14.073	1.912274	1.912274	0.46	0.167287	0.046094	NA	NA	NA	11.8306464
472	15	82563991	82563991	C	T	exonic	FAM154B	NA	nonsynonymous SNV	FAM154B:NM_001008226:exon2:c.C101T:p.P34L	exonic	ENSG00000188659	NA	nonsynonymous SNV	ENSG00000188659:ENST00000339465:exon2:c.C101T:p.P34L,ENSG00000188659:ENST00000427381:exon3:c.C56T:p.P19L,ENSG00000188659:ENST00000565432:exon4:c.C140T:p.P47L	Score=428;Name=lod=73	NA	15q25.2	NA	NA	NA	NA	rs16973457	0.37	0.37	0.383	0.373802	0.5497	0.1994	0.317	0.3154	0.4918	0.55	0.19	0.36	0.29	0.447	0.55	0.3	T	0.936	P	0.704	P	0.006	N	0.000	P	1.935	M	2.01	T	-0.907	T	0.000	T	0.274	2.688	14.95	3.93	2.481	3.564	7.259	2.68788	2.68788	0.13	0.515465	0.359737	NA	0.457	NA	11.8211684
472	11	63991801	63991801	T	C	exonic	TRPT1	NA	nonsynonymous SNV	TRPT1:NM_001160393:exon5:c.A515G:p.H172R,TRPT1:NM_031472:exon5:c.A368G:p.H123R,TRPT1:NM_001033678:exon6:c.A515G:p.H172R,TRPT1:NM_001160389:exon6:c.A521G:p.H174R,TRPT1:NM_001160390:exon6:c.A515G:p.H172R,TRPT1:NM_001160392:exon6:c.A515G:p.H172R	exonic	ENSG00000149743	NA	nonsynonymous SNV	ENSG00000149743:ENST00000546133:exon2:c.A137G:p.H46R,ENSG00000149743:ENST00000394547:exon5:c.A368G:p.H123R,ENSG00000149743:ENST00000546089:exon5:c.A368G:p.H123R,ENSG00000149743:ENST00000317459:exon6:c.A515G:p.H172R,ENSG00000149743:ENST00000394546:exon6:c.A521G:p.H174R,ENSG00000149743:ENST00000541278:exon6:c.A515G:p.H172R,ENSG00000149743:ENST00000545812:exon6:c.A521G:p.H174R	NA	Name=Attention deficit hyperactivity disorder	11q13.1	NA	Name=Pol2-4H8,Pol2(b)	Name=28	NA	rs1059440	0.17	0.17	0.144	0.153355	0.171	0.1766	0.3242	0.0915	0.0736	0.17	0.17	0.29	0.08	0.1698	0.29	0.14	T	0.103	B	0.047	B	0.002	N	1.000	P	0	N	1.06	T	-0.989	T	0.000	T	0.261	1.767	11.87	2.59	0.906	3.865	6.109	1.766573	1.766573	0.05	0.172562	0.105407	NA	0.116	NA	11.8199714
472	10	15008493	15008493	A	C	exonic	MEIG1	NA	nonsynonymous SNV	MEIG1:NM_001080836:exon2:c.A26C:p.K9T	exonic	ENSG00000197889	NA	nonsynonymous SNV	ENSG00000197889:ENST00000378240:exon1:c.A26C:p.K9T,ENSG00000197889:ENST00000407572:exon2:c.A26C:p.K9T	Score=667;Name=lod=682	NA	10p13	NA	NA	NA	NA	rs4750568	0.58	0.58	0.555	0.611222	0.668	0.4802	0.732	0.5439	0.6933	0.66	0.45	0.72	0.5	0.6597	0.72	0.3	T	0.99	D	0.709	P	0.000	D	0.000	P	.	.	0.7	T	-0.971	T	0.000	T	0.351	3.348	17.27	5.68	2.155	5.750	15.595	3.34787	3.34787	0.31	0.68814	0.584884	NA	0.623	NA	11.8174934
472	15	31294714	31294714	C	A	exonic	TRPM1	NA	stopgain	TRPM1:NM_001252020:exon27:c.G4240T:p.E1414X,TRPM1:NM_002420:exon27:c.G4123T:p.E1375X,TRPM1:NM_001252024:exon28:c.G4189T:p.E1397X	exonic	ENSG00000134160	NA	stopgain	ENSG00000134160:ENST00000559177:exon8:c.G1468T:p.E490X,ENSG00000134160:ENST00000558768:exon25:c.G3895T:p.E1299X,ENSG00000134160:ENST00000397795:exon27:c.G4123T:p.E1375X,ENSG00000134160:ENST00000542188:exon27:c.G4240T:p.E1414X,ENSG00000134160:ENST00000558445:exon27:c.G4123T:p.E1375X,ENSG00000134160:ENST00000256552:exon28:c.G4189T:p.E1397X	NA	NA	15q13.3	NA	NA	NA	NA	rs3784589	0.05	0.05	0.038	0.0682907	0.0616	0.0169	0.049	0.0772	0.1299	0.05	0.02	0.07	0.07	0.0653	0.079	0.25	T	.	.	.	.	0.072	N	1.000	D	.	.	.	.	.	.	.	.	.	7.318	39	5.05	2.341	2.601	11.870	7.318356	7.318356	0.41	0.056519	0.079275	NA	0.051	NA	11.816581
472	1	114680310	114680310	G	A	exonic	SYT6	NA	nonsynonymous SNV	SYT6:NM_001270805:exon3:c.C623T:p.T208I,SYT6:NM_205848:exon3:c.C623T:p.T208I	exonic	ENSG00000134207	NA	nonsynonymous SNV	ENSG00000134207:ENST00000369547:exon3:c.C623T:p.T208I,ENSG00000134207:ENST00000393296:exon3:c.C878T:p.T293I	Score=607;Name=lod=389	NA	1p13.2	NA	NA	NA	NA	rs41274114	0.17	0.17	0.165	0.164736	0.175	0.0784	0.1902	0.2042	0.1718	0.18	0.09	0.2	0.22	0.1644	0.22	0.27	T	0.022	B	0.101	B	0.000	D	0.000	P	0.515	N	-0.31	T	-0.973	T	0.128	T	0.243	2.721	15.06	5.45	2.567	5.813	19.29	2.721352	2.721352	0.38	0.177674	0.19882	NA	0.225	NA	11.8162594
473	1	152282311	152282311	C	T	exonic	FLG	NA	nonsynonymous SNV	FLG:NM_002016:exon3:c.G5051A:p.R1684H	exonic	ENSG00000143631	NA	nonsynonymous SNV	ENSG00000143631:ENST00000368799:exon3:c.G5051A:p.R1684H	NA	NA	1q21.3	NA	NA	NA	NA	rs12407807	0.27	0.27	0.229	0.296725	0.1421	0.5843	0.3905	0.0461	0.4315	0.15	0.59	0.33	0.07	0.232	0.59	0.3	T	0.999	D	0.974	D	.	.	1.000	P	0.255	N	3.73	T	-1.019	T	0.006	T	0.105	1.575	11.22	-5.01	-0.996	-2.483	5.650	1.575161	1.575161	0.26	0.144302	0.06877	NA	0.181	NA	11.8149314
473	12	121618257	121618257	C	G	exonic	P2RX7	NA	nonsynonymous SNV	P2RX7:NM_002562:exon12:c.C1289G:p.P430R	exonic	ENSG00000089041	NA	nonsynonymous SNV	ENSG00000089041:ENST00000541446:exon10:c.C422G:p.P141R,ENSG00000089041:ENST00000328963:exon11:c.C779G:p.P260R,ENSG00000089041:ENST00000546057:exon12:c.C1289G:p.P430R,ENSG00000089041:ENST00000535250:exon13:c.C1019G:p.P340R	Score=374;Name=lod=44	NA	12q24.31	NA	NA	NA	NA	rs10160951	0.04	0.04	0.036	0.0423323	0.003	NA	0.0058	0.1551	NA	0.0013	NA	0.01	0.15	0.0146	0.15	0.07	T	0.867	P	0.408	B	0.003	N	0.000	P	2.3	M	4.45	T	-1.011	T	0.000	T	0.765	2.582	14.59	4.71	1.374	0.650	10.498	2.581709	2.581709	0.07	0.003023	0.137767	NA	0.043	NA	11.8127104
473	12	52912909	52912909	G	T	exonic	KRT5	NA	nonsynonymous SNV	KRT5:NM_000424:exon2:c.C591A:p.D197E	exonic	ENSG00000186081	NA	nonsynonymous SNV	ENSG00000186081:ENST00000252242:exon2:c.C591A:p.D197E,ENSG00000186081:ENST00000549420:exon3:c.C261A:p.D87E	Score=569;Name=lod=273	NA	12q13.13	Score=708;Name=V$PPARG_02	NA	NA	NA	rs641615	0.25	0.25	0.085	0.215056	0.2823	0.3393	0.2233	0.1089	0.1554	0.27	0.35	0.25	0.12	0.2412	0.35	1	T	0.03	B	0.012	B	0.000	D	0.943	P	-3.76	N	-0.64	T	-0.921	T	0.000	T	0.535	0.268	5.448	2.41	0.792	0.484	7.437	0.267812	NA	1	NA	NA	NA	0.275	CLINSIG=untested;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000056634.1;CLNDSDB=.;CLNDSDBID=.	11.8098334
473	11	82564294	82564294	T	G	exonic	PRCP	NA	nonsynonymous SNV	PRCP:NM_005040:exon3:c.A336C:p.E112D,PRCP:NM_199418:exon4:c.A399C:p.E133D	exonic	ENSG00000137509	NA	nonsynonymous SNV	ENSG00000137509:ENST00000531128:exon2:c.A21C:p.E7D,ENSG00000137509:ENST00000534264:exon2:c.A21C:p.E7D,ENSG00000137509:ENST00000534631:exon2:c.A21C:p.E7D,ENSG00000137509:ENST00000535099:exon2:c.A21C:p.E7D,ENSG00000137509:ENST00000313010:exon3:c.A336C:p.E112D,ENSG00000137509:ENST00000527444:exon3:c.A21C:p.E7D,ENSG00000137509:ENST00000528082:exon3:c.A21C:p.E7D,ENSG00000137509:ENST00000529671:exon3:c.A213C:p.E71D,ENSG00000137509:ENST00000531801:exon3:c.A21C:p.E7D,ENSG00000137509:ENST00000532809:exon3:c.A174C:p.E58D,ENSG00000137509:ENST00000533126:exon3:c.A21C:p.E7D,ENSG00000137509:ENST00000393399:exon4:c.A399C:p.E133D,ENSG00000137509:ENST00000534396:exon4:c.A21C:p.E7D	Score=605;Name=lod=383	NA	11q14.1	NA	Name=PU.1	NA	NA	rs2229437	0.14	0.14	0.137	0.139377	0.1869	0.1131	0.1297	0.1051	0.1708	0.19	0.1	0.14	0.1	0.1581	0.19	.	.	0.087	B	0.081	B	0.000	D	0.000	P	2.01	M	2.4	T	-1.042	T	0.000	T	0.481	2.569	14.55	2.94	0.864	0.547	7.228	2.569018	2.569018	0.03	0.179651	0.128234	NA	0.188	NA	11.8086824
474	17	80543972	80543972	C	T	exonic	FOXK2	NA	nonsynonymous SNV	FOXK2:NM_004514:exon7:c.C1472T:p.A491V	exonic	ENSG00000141568	NA	nonsynonymous SNV	ENSG00000141568:ENST00000335255:exon7:c.C1472T:p.A491V,ENSG00000141568:ENST00000473637:exon7:c.C1472T:p.A491V	NA	NA	17q25.3	NA	NA	NA	NA	rs12150682	0.0041	0.0041	0.008	0.00379393	0.0159	NA	0.0014	0.0015	NA	0.01	NA	0.0028	NA	0.0055	0.011	0.05	D	0.83	P	0.221	B	0.005	N	1.000	N	0.69	N	-3.34	D	-0.295	T	0.481	T	0.665	2.139	13.11	3.37	0.824	2.432	9.069	2.138568	2.138568	0.06	0.008394	0.001137	NA	0.007	NA	11.8035394
474	15	63970456	63970456	T	C	exonic	HERC1	NA	nonsynonymous SNV	HERC1:NM_003922:exon37:c.A6658G:p.I2220V	exonic	ENSG00000103657	NA	nonsynonymous SNV	ENSG00000103657:ENST00000443617:exon37:c.A6658G:p.I2220V	Score=608;Name=lod=395	NA	15q22.31	NA	NA	NA	NA	rs2228510	0.36	0.36	0.328	0.366014	0.5368	0.0704	0.4395	0.4599	0.316	0.5	0.07	0.43	0.42	0.4493	0.55	0.01	D	0.001	B	0.001	B	0.001	D	0.009	P	1.1	L	1.6	T	-0.946	T	0.000	T	0.117	2.237	13.44	4.56	0.977	2.202	11.829	2.237397	2.237397	0.14	0.548107	0.470725	ID=COSM147939;OCCURENCE=1(stomach)	0.348	NA	11.7991264
474	1	159505101	159505101	G	A	exonic	OR10J5	NA	nonsynonymous SNV	OR10J5:NM_001004469:exon1:c.C697T:p.R233W	exonic	ENSG00000184155	NA	nonsynonymous SNV	ENSG00000184155:ENST00000334857:exon1:c.C697T:p.R233W	NA	NA	1q23.2	NA	NA	NA	NA	rs35393723	0.1	0.1	0.085	0.0984425	0.1869	0.0248	0.1556	0.0257	0.1411	0.2	0.01	0.14	0.01	0.1618	0.2	0.01	D	0.145	B	0.045	B	.	.	1.000	P	2.14	M	8.06	T	-1.027	T	0.000	T	0.038	-0.465	1.851	-7.29	-2.366	-1.216	5.142	-0.465148	NA	0.07	0.185581	0.050613	NA	0.116	NA	11.7990524
475	10	50531137	50531137	A	T	exonic	C10orf71	NA	nonsynonymous SNV	C10orf71:NM_001135196:exon3:c.A547T:p.S183C	exonic	ENSG00000177354	NA	nonsynonymous SNV	ENSG00000177354:ENST00000323868:exon3:c.A547T:p.S183C,ENSG00000177354:ENST00000374144:exon3:c.A547T:p.S183C	NA	NA	10q11.23	NA	NA	NA	NA	rs41281949	0.01	0.01	0.007	0.00758786	0.0179	NA	0.0144	0.0008	0.0092	0.02	NA	0.01	0.002	0.0079	0.02	0.01	D	0.992	D	0.613	P	0.003	N	1.000	N	0	N	3.55	T	-1.076	T	0.015	T	0.14	2.753	15.17	3.24	0.493	1.979	8.458	2.752975	2.752975	0.01	0.012713	0.002005	NA	NA	NA	11.7948204
475	2	11706672	11706672	C	T	exonic	GREB1	NA	nonsynonymous SNV	GREB1:NM_014668:exon4:c.C344T:p.A115V,GREB1:NM_033090:exon4:c.C344T:p.A115V,GREB1:NM_148903:exon4:c.C344T:p.A115V	exonic	ENSG00000196208	NA	nonsynonymous SNV	ENSG00000196208:ENST00000234142:exon3:c.C344T:p.A115V,ENSG00000196208:ENST00000389825:exon3:c.C14T:p.A5V,ENSG00000196208:ENST00000263834:exon4:c.C344T:p.A115V,ENSG00000196208:ENST00000381483:exon4:c.C344T:p.A115V,ENSG00000196208:ENST00000381486:exon4:c.C344T:p.A115V	NA	NA	2p25.1	NA	NA	NA	NA	rs142882892	0.0046	0.0046	0.006	0.00479233	0.0109	NA	0.0072	0.0008	0.0072	0.01	NA	0.0028	0.002	0.012	0.018	0.05	D	0.846	P	0.246	B	0.029	N	1.000	N	1.585	L	3.06	T	-1.014	T	0.063	T	0.044	2.597	14.65	4.63	1.337	5.952	14.603	2.597412	2.597412	0.03	0.018256	0.004539	NA	NA	NA	11.7921774
475	12	52863213	52863213	C	T	exonic	KRT6C	NA	nonsynonymous SNV	KRT6C:NM_173086:exon8:c.G1441A:p.V481I	exonic	ENSG00000170465	NA	nonsynonymous SNV	ENSG00000170465:ENST00000252250:exon8:c.G1441A:p.V481I	Score=431;Name=lod=75	NA	12q13.13	NA	NA	NA	NA	rs412533	0.33	0.33	0.313	0.249601	0.3628	0.4812	0.2637	0.0242	0.1892	0.36	0.56	0.32	0.04	0.3149	0.56	0.17	T	0.824	P	0.08	B	0.000	D	0.979	P	1.7	L	-3.05	D	-0.943	T	0.000	T	0.057	1.81	12.01	3.57	1.983	0.864	11.804	1.809706	1.809706	0.21	0.367791	0.07172	NA	0.304	NA	11.7878424
475	12	6567907	6567907	C	T	exonic	TAPBPL	NA	nonsynonymous SNV	TAPBPL:NM_018009:exon5:c.C1001T:p.T334M	exonic	ENSG00000139192	NA	nonsynonymous SNV	ENSG00000139192:ENST00000266556:exon5:c.C1001T:p.T334M	Score=363;Name=lod=40	NA	12p13.31	Score=1000;Name=V$ATF6_01	Name=Pol2	NA	NA	rs1045546	0.1	0.1	0.074	0.0970447	0.1819	0.0089	0.1196	0.0076	0.2055	0.19	0.01	0.16	0.01	0.1672	0.2	0.09	T	0.24	B	0.086	B	0.057	N	0.000	P	2.055	M	3.96	T	-0.984	T	0.000	T	0.138	1.192	9.846	3.38	0.691	-0.172	7.175	1.192328	NA	0.02	0.198605	0.039492	NA	0.072	NA	11.7856284
476	2	219507166	219507166	G	A	exonic	ZNF142	NA	nonsynonymous SNV	ZNF142:NM_001105537:exon8:c.C4073T:p.A1358V	exonic	ENSG00000115568	NA	nonsynonymous SNV	ENSG00000115568:ENST00000411696:exon7:c.C4073T:p.A1358V,ENSG00000115568:ENST00000449707:exon8:c.C4073T:p.A1358V	Score=425;Name=lod=71	NA	2q35	NA	NA	NA	NA	rs114603798	0.01	0.01	0.013	0.0145767	0.0179	NA	0.0159	NA	0.045	0.02	NA	0.02	NA	0.0181	0.02	0.2	T	0.78	P	0.265	B	0.001	N	0.950	N	-0.18	N	1.71	T	-1.080	T	0.014	T	0.047	2.219	13.38	3.51	1.497	2.126	8.817	2.218753	2.218753	0.07	0.018875	0.002581	NA	0.007	NA	11.7784584
477	5	141019569	141019569	G	C	exonic	RELL2	NA	nonsynonymous SNV	RELL2:NM_173828:exon5:c.G586C:p.G196R,RELL2:NM_001130029:exon6:c.G586C:p.G196R	exonic	ENSG00000164620	NA	nonsynonymous SNV	ENSG00000164620:ENST00000297164:exon5:c.G586C:p.G196R,ENSG00000164620:ENST00000518856:exon5:c.G388C:p.G130R,ENSG00000164620:ENST00000521367:exon5:c.G388C:p.G130R,ENSG00000164620:ENST00000444782:exon6:c.G586C:p.G196R	Score=455;Name=lod=94	NA	5q31.3	Score=772;Name=V$HEN1_01	NA	NA	NA	rs17855844	0.16	0.16	0.137	0.183906	0.161	0.1468	0.2205	0.1225	0.3027	0.17	0.13	0.22	0.14	0.2037	0.22	0.18	T	0.665	P	0.531	P	0.115	N	0.000	P	0.69	N	2.43	T	-0.976	T	0.000	T	0.164	2.923	15.74	3.11	1.026	-0.127	5.099	2.923004	2.923004	0.42	0.19458	0.137313	NA	0.116	NA	11.7740534
477	4	155491759	155491759	G	A	exonic	FGB	NA	nonsynonymous SNV	FGB:NM_001184741:exon8:c.G1256A:p.R419K,FGB:NM_005141:exon8:c.G1433A:p.R478K	exonic	ENSG00000171564	NA	nonsynonymous SNV	ENSG00000171564:ENST00000509493:exon6:c.G776A:p.R259K,ENSG00000171564:ENST00000302068:exon8:c.G1433A:p.R478K	Score=522;Name=lod=177	NA	4q31.3	NA	NA	NA	NA	rs4220	0.17	0.17	0.149	0.153355	0.1998	0.2242	0.1499	0.0756	0.1401	0.21	0.18	0.2	0.09	0.1732	0.21	1	T	0.0	B	0.002	B	0.000	N	1.000	P	-1.75	N	-1.19	T	-1.068	T	0.000	T	0.072	0.051	4.277	-2.97	-1.030	3.223	7.404	0.050543	NA	1	0.189884	0.088516	NA	0.167	CLINSIG=other;CLNDBN=FIBRINOGEN_BALTIMORE_2;CLNREVSTAT=single;CLNACC=RCV000017808.1;CLNDSDB=.;CLNDSDBID=.	11.7704494
478	4	844781	844781	G	A	exonic	GAK	NA	synonymous SNV	GAK:NM_005255:exon26:c.C3600T:p.T1200T	exonic	ENSG00000178950	NA	nonsynonymous SNV	ENSG00000178950:ENST00000504668:exon2:c.C197T:p.P66L	Score=391;Name=lod=52	NA	4p16.3	Score=865;Name=V$COUP_01	NA	NA	NA	rs75072999	0.03	0.03	0.033	0.0267572	0.0835	NA	0.036	0.0015	0.0235	0.07	NA	0.04	0.0041	0.0606	0.093	0	D	.	.	.	.	.	.	1.000	D	.	.	.	.	-0.950	T	0.021	T	.	1.853	12.15	2.33	0.625	0.666	11.037	1.852878	1.852878	NA	0.093256	0.020881	ID=COSM287830;OCCURENCE=1(large_intestine)	0.043	NA	11.762644
478	12	20905250	20905250	C	T	exonic	SLCO1C1	NA	nonsynonymous SNV	SLCO1C1:NM_001145944:exon13:c.C1676T:p.S559F,SLCO1C1:NM_001145946:exon16:c.C2030T:p.S677F	exonic	ENSG00000139155	NA	nonsynonymous SNV	ENSG00000139155:ENST00000545102:exon13:c.C1676T:p.S559F,ENSG00000139155:ENST00000381552:exon15:c.C2030T:p.S677F,ENSG00000139155:ENST00000545604:exon16:c.C2030T:p.S677F	Score=443;Name=lod=84	NA	12p12.2	NA	NA	NA	NA	rs6487138	0.48	0.48	0.444	0.469449	0.495	0.5923	0.5677	0.2012	0.6094	0.51	0.63	0.53	0.22	0.5359	0.63	0.04	D	0.946	P	0.789	P	0.004	N	0.000	P	.	.	1.11	T	-0.920	T	0.000	T	0.217	3.12	16.43	5.37	2.797	2.654	16.148	3.120305	3.120305	0	0.540833	0.247956	NA	0.536	NA	11.7616004
478	1	153271621	153271621	G	A	exonic	PGLYRP3	NA	nonsynonymous SNV	PGLYRP3:NM_052891:exon6:c.C815T:p.A272V	exonic	ENSG00000159527	NA	nonsynonymous SNV	ENSG00000159527:ENST00000290722:exon6:c.C815T:p.A272V	Score=426;Name=lod=72	NA	1q21.3	NA	NA	NA	NA	rs34391119	0.01	0.01	0.011	0.00778754	0.0298	NA	0.0072	0.0015	0.002	0.03	NA	0.01	0.01	0.0174	0.03	0	D	0.999	D	0.898	P	0.051	N	0.831	N	2.675	M	2.21	T	-1.055	T	0.064	T	0.261	3.455	17.7	1.15	0.332	0.737	13.095	3.454835	3.454835	0.01	0.027674	0.004312	NA	0.014	NA	11.7584594
478	3	125648356	125648356	T	C	exonic	ALG1L	NA	nonsynonymous SNV	ALG1L:NM_001015050:exon6:c.A403G:p.N135D,ALG1L:NM_001195223:exon7:c.A463G:p.N155D	exonic	ENSG00000189366	NA	nonsynonymous SNV	ENSG00000189366:ENST00000340333:exon6:c.A403G:p.N135D	Score=366;Name=lod=41	NA	3q21.2	NA	NA	NA	NA	rs3828357	0.29	0.29	0.291	0.277157	0.3738	0.245	0.2738	0.2262	0.2822	0.37	0.26	0.27	0.24	0.3402	0.37	0.19	T	0.594	P	0.164	B	0.001	D	0.000	P	1.005	L	-0.48	T	-0.998	T	0.000	T	0.019	1.952	12.49	2.3	1.057	4.720	8.154	1.952222	1.952222	0.16	0.361003	0.268978	NA	0.196	NA	11.7583304
479	1	231408091	231408091	A	G	exonic	GNPAT	NA	nonsynonymous SNV	GNPAT:NM_014236:exon11:c.A1556G:p.D519G	exonic	ENSG00000116906	NA	nonsynonymous SNV	ENSG00000116906:ENST00000366646:exon10:c.A1373G:p.D458G,ENSG00000116906:ENST00000366647:exon11:c.A1556G:p.D519G,ENSG00000116906:ENST00000416000:exon11:c.A1526G:p.D509G	NA	NA	1q42.2	NA	Name=c-Fos,c-Jun	Name=19	NA	rs11558492	0.14	0.14	0.126	0.135583	0.2127	0.1002	0.1729	0.0688	0.1564	0.19	0.1	0.2	0.08	0.1612	0.21	0.05	D	0.075	B	0.034	B	0.037	N	0.998	P	1.04	L	-0.1	T	-1.082	T	0.000	T	0.228	1.77	11.88	-0.263	-0.134	1.947	9.158	1.770311	1.770311	0.15	0.205814	0.091693	NA	0.101	CLINSIG=pathogenic;CLNDBN=Rhizomelic_chondrodysplasia_punctata_type_2;CLNREVSTAT=single;CLNACC=RCV000029140.1;CLNDSDB=MedGen:OMIM:Orphanet;CLNDSDBID=C1857242:222765:ORPHA177	11.7536194
479	1	32557486	32557486	A	G	exonic	TMEM39B	NA	synonymous SNV	TMEM39B:NM_018056:exon6:c.A801G:p.S267S	exonic	ENSG00000121775	NA	nonsynonymous SNV	ENSG00000121775:ENST00000441402:exon4:c.A562G:p.T188A,ENSG00000121775:ENST00000456834:exon5:c.A646G:p.T216A	Score=585;Name=lod=319	NA	1p35.1	NA	NA	Name=2	NA	rs744455	0.17	0.17	0.162	0.223642	0.0596	0.2351	0.232	0.2927	0.2812	0.06	0.23	0.14	0.3	0.1241	0.3	0	D	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.012	T	0.000	T	.	2.149	13.14	-10.3	-2.042	-1.285	2.614	2.14881	2.14881	0	0.065116	0.268724	NA	0.217	NA	11.751184
479	3	108634973	108634973	C	A	splicing	GUCA1C	NM_005459:exon4:c.442+1G>T	NA	NA	exonic;splicing	ENSG00000138472;ENSG00000138472	ENST00000261047:exon4:c.442+1G>T	nonsynonymous SNV	ENSG00000138472:ENST00000393963:exon3:c.G443T:p.G148V,ENSG00000138472:ENST00000471108:exon3:c.G443T:p.G148V	Score=321;Name=lod=27	NA	3q13.13	NA	NA	NA	NA	rs10933973	0.26	0.26	0.257	0.249601	0.3042	0.1806	0.3084	0.2519	0.2198	0.3	0.22	0.3	0.2	0.2991	0.31	0	D	1.0	D	0.995	D	.	.	0.000	P	.	.	-1.8	D	-1.079	T	0.000	T	0.622	2.434	14.1	-0.274	-0.323	1.417	7.715	2.433951	2.433951	0	0.313488	0.270767	NA	0.167	NA	11.7498787
479	21	37518706	37518706	G	A	exonic	CBR3	NA	nonsynonymous SNV	CBR3:NM_001236:exon3:c.G730A:p.V244M	exonic	ENSG00000159231	NA	nonsynonymous SNV	ENSG00000159231:ENST00000290354:exon3:c.G730A:p.V244M	Score=414;Name=lod=64	NA	21q22.12	NA	NA	NA	NA	rs1056892	0.38	0.38	0.392	0.427117	0.3539	0.4048	0.2608	0.5098	0.5317	0.36	0.41	0.29	0.47	0.3742	0.47	0.05	D	0.622	P	0.141	B	0.001	D	0.898	P	2.185	M	2.87	T	-0.904	T	0.000	T	0.063	2.341	13.78	0.552	0.567	2.055	11.334	2.340505	2.340505	0.07	0.359767	0.474807	NA	0.304	NA	11.7454664
480	1	152749091	152749091	C	T	exonic	LCE1F	NA	nonsynonymous SNV	LCE1F:NM_178354:exon1:c.C244T:p.R82W	exonic	ENSG00000240386	NA	nonsynonymous SNV	ENSG00000240386:ENST00000334371:exon1:c.C244T:p.R82W	Score=435;Name=lod=78	NA	1q21.3	NA	NA	NA	NA	rs41268480	0.1	0.1	0.079	0.0908546	0.2117	0.0278	0.1311	0.0053	0.1186	0.22	0.02	0.12	0.01	0.1691	0.22	0	D	0.968	D	0.335	B	.	.	0.982	P	1.59	L	3.79	T	-0.980	T	0.009	T	0.111	1.334	10.38	4.45	2.445	0.406	12.773	1.333655	1.333655	NA	0.214851	0.036574	NA	0.065	NA	11.7376824
480	6	47649265	47649265	T	A	exonic	GPR111	NA	nonsynonymous SNV	GPR111:NM_153839:exon7:c.T766A:p.L256M	exonic	ENSG00000164393	NA	nonsynonymous SNV	ENSG00000164393:ENST00000398742:exon5:c.T766A:p.L256M,ENSG00000164393:ENST00000296862:exon6:c.T970A:p.L324M,ENSG00000164393:ENST00000507065:exon6:c.T766A:p.L256M,ENSG00000164393:ENST00000467205:exon7:c.T766A:p.L256M	NA	NA	6p12.3	NA	NA	NA	NA	rs17541107	0.44	0.44	0.41	0.397564	0.3678	0.6915	0.5331	0.236	0.2474	0.38	0.7	0.48	0.22	0.3802	0.7	0.18	T	0.973	D	0.807	P	0.415	N	1.000	P	2.28	M	0.91	T	-0.992	T	0.086	T	0.091	2.287	13.6	-6.69	-1.925	-1.302	9.618	2.28673	2.28673	0.11	0.348058	0.280507	NA	0.442	NA	11.7372754
480	15	56208463	56208463	A	C	exonic	NEDD4	NA	nonsynonymous SNV	NEDD4:NM_198400:exon1:c.T567G:p.S189R	exonic	ENSG00000069869	NA	nonsynonymous SNV	ENSG00000069869:ENST00000338963:exon1:c.T567G:p.S189R,ENSG00000069869:ENST00000506154:exon1:c.T567G:p.S189R,ENSG00000069869:ENST00000508342:exon1:c.T567G:p.S189R	Score=399;Name=lod=56	NA	15q21.3	NA	NA	Name=68	NA	rs113176671	0.01	0.01	0.015	0.00998403	0.0368	0.001	0.0115	0.0015	0.002	0.04	NA	0.01	NA	0.0242	0.04	0	D	0.835	P	0.398	B	.	.	1.000	N	1.04	L	1.01	T	-1.008	T	0.024	T	0.275	3.24	16.86	-2.59	-0.280	0.639	13.311	3.23983	3.23983	0	0.035423	0.00456	NA	0.014	NA	11.7369104
480	17	6690164	6690164	A	G	exonic	FBXO39	NA	nonsynonymous SNV	FBXO39:NM_153230:exon3:c.A1089G:p.I363M	exonic	ENSG00000177294	NA	nonsynonymous SNV	ENSG00000177294:ENST00000321535:exon3:c.A1089G:p.I363M	Score=536;Name=lod=201	NA	17p13.1	NA	Name=CTCF,Pol2,c-Fos,c-Jun	Name=101	NA	rs7213731	0.15	0.15	0.146	0.150759	0.2167	0.002	0.2003	0.1989	0.136	0.22	0.0017	0.21	0.19	0.1825	0.22	0.27	T	0.001	B	0.004	B	0.062	N	1.000	P	0	N	0.63	T	-1.039	T	0.000	T	0.263	1.536	11.09	-6.49	-1.087	-0.129	12.722	1.536159	1.536159	0.22	0.198372	0.196096	NA	0.159	NA	11.7357614
481	17	39884065	39884065	C	A	exonic	HAP1	NA	nonsynonymous SNV	HAP1:NM_177977:exon8:c.G1224T:p.L408F	exonic	ENSG00000173805	NA	nonsynonymous SNV	ENSG00000173805:ENST00000310778:exon8:c.G1224T:p.L408F,ENSG00000173805:ENST00000347901:exon8:c.G1224T:p.L408F	Score=423;Name=lod=70	NA	17q21.2	NA	NA	NA	NA	rs35612698	0.26	0.26	0.259	0.236422	0.4016	0.1935	0.2493	0.1793	0.1789	0.39	0.15	0.29	0.17	0.3041	0.39	0.01	D	0.99	D	0.901	P	.	.	0.000	P	2.455	M	1.3	T	-0.976	T	0.000	T	0.156	2.506	14.34	1.28	1.809	0.135	3.458	2.50598	2.50598	0.05	0.39314	0.213118	NA	0.246	NA	11.7344934
482	17	4936898	4936898	C	T	exonic	SLC52A1	NA	nonsynonymous SNV	SLC52A1:NM_001104577:exon3:c.G886A:p.V296M,SLC52A1:NM_017986:exon3:c.G886A:p.V296M	exonic	ENSG00000132517	NA	nonsynonymous SNV	ENSG00000132517:ENST00000254853:exon3:c.G886A:p.V296M,ENSG00000132517:ENST00000424747:exon3:c.G886A:p.V296M,ENSG00000132517:ENST00000512825:exon3:c.G886A:p.V296M	Score=583;Name=lod=313	NA	17p13.2	NA	NA	NA	NA	rs2304445	0.27	0.27	0.263	0.30651	0.1909	0.506	0.2565	0.1172	0.5112	0.19	0.5	0.25	0.13	0.2482	0.5	0.05	D	1.0	D	0.983	D	0.000	D	0.001	P	1.69	L	-0.9	T	-0.957	T	0.000	T	0.136	2.108	13.01	-0.105	-0.032	0.399	3.634	2.108368	2.108368	0	0.171628	0.120971	ID=COSM1384504;OCCURENCE=1(large_intestine)	0.181	NA	11.7226054
482	12	4735969	4735969	G	A	exonic	AKAP3	NA	nonsynonymous SNV	AKAP3:NM_006422:exon4:c.C2099T:p.S700F	exonic	ENSG00000111254	NA	nonsynonymous SNV	ENSG00000111254:ENST00000228850:exon4:c.C2099T:p.S700F,ENSG00000111254:ENST00000545990:exon5:c.C2099T:p.S700F	Score=358;Name=lod=38	NA	12p13.32	NA	NA	Name=8	NA	rs2041291	NA	NA	NA	0.158347	0.1143	0.1647	0.1225	0.1248	0.2679	NA	NA	NA	NA	NA	NA	0.06	T	0.96	D	0.765	P	0.397	N	1.000	N	2.015	M	2.95	T	-1.018	T	0.061	T	0.392	1.359	10.47	0.415	-0.136	0.055	16.733	1.358997	1.358997	0.02	NA	NA	NA	NA	NA	11.7190334
482	19	38056574	38056574	T	A	exonic	ZNF571	NA	nonsynonymous SNV	ZNF571:NM_016536:exon4:c.A756T:p.E252D	exonic	ENSG00000180479	NA	nonsynonymous SNV	ENSG00000180479:ENST00000328550:exon4:c.A756T:p.E252D,ENSG00000180479:ENST00000451802:exon4:c.A756T:p.E252D,ENSG00000180479:ENST00000593133:exon4:c.A756T:p.E252D,ENSG00000180479:ENST00000358744:exon5:c.A756T:p.E252D	Score=300;Name=lod=22	NA	19q13.12	NA	Name=KAP1,ZNF274,SETDB1	NA	NA	rs28512414	0.36	0.36	0.353	0.368211	0.168	0.6528	0.2637	0.3555	0.3722	0.17	0.65	0.25	0.41	0.2613	0.65	0.07	T	0.003	B	0.031	B	.	.	0.000	P	1.685	L	1.97	T	-0.977	T	0.000	T	0.052	2.214	13.36	3.87	1.604	-1.471	7.564	2.213757	2.213757	0.01	0.185478	0.315252	NA	0.297	NA	11.7185554
483	9	4617999	4617999	G	C	exonic	SPATA6L	NA	nonsynonymous SNV	SPATA6L:NM_001039395:exon8:c.C745G:p.H249D	exonic	ENSG00000106686	NA	nonsynonymous SNV	ENSG00000106686:ENST00000475086:exon8:c.C745G:p.H249D,ENSG00000106686:ENST00000461761:exon9:c.C919G:p.H307D,ENSG00000106686:ENST00000454239:exon10:c.C919G:p.H307D,ENSG00000106686:ENST00000381895:exon12:c.C550G:p.H184D	NA	NA	9p24.1	NA	Name=JunD	Name=9	NA	rs41302077	0.08	0.08	0.051	0.0636981	0.0398	0.0169	0.0879	0.0794	0.0982	0.07	0.04	0.1	0.14	0.0472	0.14	0.25	T	0.989	D	0.836	P	0.123	N	1.000	N	1.845	L	1.83	T	-1.156	T	0.001	T	0.287	1.033	9.22	2.02	0.332	0.924	6.723	1.033151	NA	0.19	0.037064	0.06774	NA	0.101	NA	11.7092694
483	17	38935812	38935812	A	G	exonic	KRT27	NA	nonsynonymous SNV	KRT27:NM_181537:exon5:c.T914C:p.I305T	exonic	ENSG00000171446	NA	nonsynonymous SNV	ENSG00000171446:ENST00000301656:exon5:c.T914C:p.I305T	NA	NA	17q21.2	NA	Name=TBP,E2F6_(H-50)	Name=12	NA	rs981684	0.6	0.6	0.61	0.555711	0.5209	0.8254	0.6153	0.4531	0.41	0.52	0.83	0.58	0.45	0.5581	0.83	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-1.88	N	-2.26	D	-0.949	T	0.000	T	0.086	-0.748	0.822	5.52	1.483	2.487	14.010	-0.74815	NA	1	0.548023	0.458693	NA	0.464	NA	11.7063104
484	X	1314931	1314931	C	T	exonic	CRLF2	NA	nonsynonymous SNV	CRLF2:NM_022148:exon6:c.G730A:p.V244M	exonic	ENSG00000205755	NA	nonsynonymous SNV	ENSG00000205755:ENST00000381567:exon6:c.G730A:p.V244M,ENSG00000205755:ENST00000400841:exon6:c.G730A:p.V244M	NA	NA	Xp22.33	NA	NA	NA	NA	rs151218732	0.05	0.05	0.03418	NA	NA	NA	NA	NA	NA	0.07	NA	0.06	0.08	0.0616	0.089	0.15	T	0.981	D	0.867	P	0.076	U	1.000	N	.	.	-5.04	D	0.009	D	0.331	T	0.303	0.941	8.836	-2.96	-0.706	-0.399	0.322	0.941191	NA	0	0.067505	0.089381	NA	0.014	NA	11.7042284
485	21	47423509	47423509	C	T	exonic	COL6A1	NA	nonsynonymous SNV	COL6A1:NM_001848:exon35:c.C2669T:p.S890L	exonic	ENSG00000142156	NA	nonsynonymous SNV	ENSG00000142156:ENST00000361866:exon35:c.C2669T:p.S890L	NA	NA	21q22.3	NA	NA	Name=11	NA	rs13051496	0.15	0.15	0.164	0.108826	0.2604	0.0615	0.1196	0.0424	0.0838	0.27	0.07	0.14	0.07	0.1626	0.27	0.27	T	0.126	B	0.041	B	0.057	N	1.000	P	-0.805	N	-1.26	T	-1.091	T	0.000	T	0.077	1.462	10.83	4.03	1.035	3.945	11.892	1.462082	1.462082	0.04	0.216213	0.055833	ID=COSM444607;OCCURENCE=1(breast)	0.058	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000079802.2;CLNDSDB=.;CLNDSDBID=.	11.6941204
485	3	7494417	7494417	A	T	exonic	GRM7	NA	nonsynonymous SNV	GRM7:NM_000844:exon6:c.A1298T:p.Y433F,GRM7:NM_181874:exon6:c.A1298T:p.Y433F	exonic	ENSG00000196277	NA	nonsynonymous SNV	ENSG00000196277:ENST00000445087:exon3:c.A269T:p.Y90F,ENSG00000196277:ENST00000357716:exon6:c.A1298T:p.Y433F,ENSG00000196277:ENST00000389335:exon6:c.A1298T:p.Y433F,ENSG00000196277:ENST00000389336:exon6:c.A1298T:p.Y433F,ENSG00000196277:ENST00000402647:exon6:c.A1298T:p.Y433F,ENSG00000196277:ENST00000403881:exon6:c.A1298T:p.Y433F,ENSG00000196277:ENST00000440923:exon6:c.A1298T:p.Y433F,ENSG00000196277:ENST00000467425:exon6:c.A1298T:p.Y433F,ENSG00000196277:ENST00000486284:exon6:c.A1298T:p.Y433F	Score=289;Name=lod=20	NA	3p26.1	Score=879;Name=V$AP1_01	NA	NA	NA	rs2229902	0.22	0.22	0.189	0.157348	0.4046	0.0744	0.2507	0.0272	0.0982	0.41	0.07	0.28	0.04	0.3052	0.44	0.7	T	0.523	P	0.239	B	0.017	N	0.187	P	0.995	L	-1.66	D	-0.981	T	0.000	T	0.125	1.214	9.927	3.39	0.414	2.335	6.541	1.213739	NA	0.41	0.435233	0.097821	NA	0.116	NA	11.6883004
485	2	234432017	234432017	A	G	exonic	USP40	NA	nonsynonymous SNV	USP40:NM_018218:exon15:c.T2033C:p.V678A	exonic	ENSG00000085982	NA	nonsynonymous SNV	ENSG00000085982:ENST00000427112:exon15:c.T1997C:p.V666A,ENSG00000085982:ENST00000450966:exon15:c.T2033C:p.V678A,ENSG00000085982:ENST00000251722:exon16:c.T1997C:p.V666A	Score=313;Name=lod=25	NA	2q37.1	Score=911;Name=V$MYCMAX_02	NA	NA	NA	rs838543	0.19	0.19	0.181	0.180112	0.2435	0.1458	0.134	0.2284	0.1176	0.23	0.12	0.13	0.25	0.1909	0.25	0.13	T	0.107	B	0.023	B	.	.	0.000	P	1.725	L	0.63	T	-1.089	T	0.000	T	0.271	1.989	12.61	5.57	2.119	2.928	14.309	1.989024	1.989024	1	0.210696	0.21105	NA	0.159	NA	11.6882374
485	1	40363054	40363054	G	C	exonic	MYCL1	NA	nonsynonymous SNV	MYCL1:NM_001033081:exon2:c.C1085G:p.T362S,MYCL1:NM_001033082:exon3:c.C1175G:p.T392S	exonic	ENSG00000116990	NA	nonsynonymous SNV	ENSG00000116990:ENST00000372816:exon2:c.C1085G:p.T362S,ENSG00000116990:ENST00000397332:exon3:c.C1175G:p.T392S	Score=483;Name=lod=123	NA	1p34.2	Score=851;Name=V$NFY_C	Name=TAF7_(SQ-8),ZNF263,TBP,GTF2B,HEY1	Name=4	NA	rs3134614	0.95	0.95	0.954	0.935703	0.8917	1	0.9035	0.9962	0.8558	0.89	1	0.91	1	0.8865	1	0.71	T	0.0	B	0.0	B	0.000	N	0.000	P	-0.345	N	-0.9	T	-0.955	T	0.000	T	0.063	-1.019	0.234	4.53	1.316	0.985	5.637	-1.018913	NA	1	0.867209	0.974807	NA	0.971	NA	11.6879244
485	19	8138054	8138054	C	A	exonic	FBN3	NA	nonsynonymous SNV	FBN3:NM_032447:exon61:c.G7830T:p.E2610D	exonic	ENSG00000142449	NA	nonsynonymous SNV	ENSG00000142449:ENST00000270509:exon61:c.G7830T:p.E2610D,ENSG00000142449:ENST00000600128:exon62:c.G7830T:p.E2610D,ENSG00000142449:ENST00000601739:exon62:c.G7830T:p.E2610D	Score=484;Name=lod=124	NA	19p13.2	NA	Name=c-Myc,Max	Name=11	NA	rs7257948	0.6	0.6	0.595	0.579473	0.5586	0.3552	0.6441	0.8956	0.3589	0.57	0.4	0.64	0.87	0.5465	0.87	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-1.87	N	1.97	T	-0.995	T	0.000	T	0.112	-1.328	0.032	-3.82	-2.290	-1.163	10.101	-1.328437	NA	1	0.540465	0.845438	ID=COSM1397709;OCCURENCE=1(large_intestine)	0.652	NA	11.6877684
485	7	134889141	134889141	G	A	exonic	WDR91	NA	nonsynonymous SNV	WDR91:NM_014149:exon6:c.C770T:p.P257L	exonic	ENSG00000105875	NA	nonsynonymous SNV	ENSG00000105875:ENST00000344400:exon6:c.C770T:p.P257L,ENSG00000105875:ENST00000354475:exon6:c.C770T:p.P257L,ENSG00000105875:ENST00000423565:exon6:c.C665T:p.P222L	Score=349;Name=lod=35	NA	7q33	NA	NA	Name=74	NA	rs292592	0.65	0.65	0.639	0.655152	0.7087	0.6131	0.804	0.4955	0.7536	0.72	0.59	0.8	0.53	0.7135	0.8	0.42	T	0.899	P	0.365	B	0.000	D	0.000	P	0.975	L	1.37	T	-1.024	T	0.000	T	0.319	4.597	25	5.4	2.548	6.474	17.370	4.596691	4.596691	0.23	0.723605	0.549932	ID=COSM324308;OCCURENCE=1(lung)	0.703	NA	11.6875284
485	16	71773190	71773190	G	T	exonic	AP1G1	NA	nonsynonymous SNV	AP1G1:NM_001128:exon20:c.C2054A:p.P685H,AP1G1:NM_001030007:exon21:c.C2063A:p.P688H	exonic	ENSG00000166747	NA	nonsynonymous SNV	ENSG00000166747:ENST00000564155:exon4:c.C329A:p.P110H,ENSG00000166747:ENST00000299980:exon20:c.C2054A:p.P685H,ENSG00000166747:ENST00000393512:exon21:c.C2063A:p.P688H,ENSG00000166747:ENST00000423132:exon21:c.C2063A:p.P688H,ENSG00000166747:ENST00000433195:exon23:c.C2123A:p.P708H,ENSG00000166747:ENST00000569748:exon23:c.C2054A:p.P685H	Score=608;Name=lod=396	NA	16q22.2	NA	NA	NA	NA	rs904763	0.18	0.18	0.175	0.240815	0.2127	0.1895	0.1945	0.1112	0.5307	0.2	0.2	0.22	0.12	0.2344	0.25	0.46	T	0.36	B	0.182	B	0.000	D	0.000	P	1.15	L	2.43	T	-0.912	T	0.000	T	0.376	3.1	16.36	5.65	2.658	6.138	14.543	3.100175	3.100175	0.21	0.19907	0.125796	NA	0.174	NA	11.6871634
485	2	62067433	62067433	T	C	exonic	FAM161A	NA	nonsynonymous SNV	FAM161A:NM_001201543:exon3:c.A706G:p.I236V,FAM161A:NM_032180:exon3:c.A706G:p.I236V	exonic	ENSG00000170264	NA	nonsynonymous SNV	ENSG00000170264:ENST00000404929:exon3:c.A706G:p.I236V,ENSG00000170264:ENST00000405894:exon3:c.A706G:p.I236V	Score=395;Name=lod=54	NA	2p15	NA	NA	NA	NA	rs17513722	0.15	0.15	0.133	0.116414	0.2227	0.0863	0.1427	0.0408	0.1217	0.23	0.1	0.18	0.05	0.1842	0.24	0.5	T	0.924	P	0.52	P	0.000	D	0.677	P	1.81	L	1.51	T	-1.009	T	0.000	T	0.188	1.86	12.18	4.38	0.919	1.029	7.965	1.860464	1.860464	0.14	0.239588	0.074064	NA	0.072	NA	11.6868454
485	19	49116359	49116359	T	C	exonic	FAM83E	NA	nonsynonymous SNV	FAM83E:NM_017708:exon1:c.A271G:p.T91A	exonic	ENSG00000105523	NA	nonsynonymous SNV	ENSG00000105523:ENST00000263266:exon1:c.A271G:p.T91A,ENSG00000105523:ENST00000593772:exon2:c.A22G:p.T8A	NA	NA	19q13.33	NA	Name=Pol2	Name=5	NA	rs447802	0.49	0.49	NA	0.550919	0.2614	0.7431	0.4986	0.7277	0.4489	0.24	0.68	0.44	0.7	0.386	0.7	1	T	0.0	B	0.002	B	0.178	N	1.000	P	0.55	N	2.85	T	-0.944	T	0.000	T	0.016	-0.215	2.961	-5.7	-1.443	-1.799	10.325	-0.214627	NA	0.87	NA	NA	ID=COSM439909;OCCURENCE=1(breast),1(large_intestine)	0.522	NA	11.6859334
486	10	91479211	91479211	G	T	exonic	KIF20B	NA	nonsynonymous SNV	KIF20B:NM_016195:exon13:c.G1470T:p.E490D	exonic	ENSG00000138182	NA	nonsynonymous SNV	ENSG00000138182:ENST00000260753:exon13:c.G1470T:p.E490D,ENSG00000138182:ENST00000371728:exon13:c.G1470T:p.E490D,ENSG00000138182:ENST00000394289:exon13:c.G1470T:p.E490D,ENSG00000138182:ENST00000416354:exon13:c.G1470T:p.E490D	Score=363;Name=lod=40	NA	10q23.31	NA	NA	NA	NA	rs17484219	0.14	0.14	0.14	0.127196	0.2276	0.001	0.1859	0.0855	0.1687	0.23	0.0017	0.2	0.1	0.1905	0.23	0.46	T	0.602	P	0.491	P	0.002	N	0.987	P	2.33	M	-0.24	T	-1.033	T	0.000	T	0.055	1.173	9.772	3.72	0.668	1.059	3.831	1.17291	NA	0.35	0.230877	0.09673	NA	0.181	NA	11.6843564
486	17	39633349	39633349	G	C	exonic	KRT35	NA	nonsynonymous SNV	KRT35:NM_002280:exon7:c.C1327G:p.P443A	exonic	ENSG00000197079	NA	nonsynonymous SNV	ENSG00000197079:ENST00000246639:exon7:c.C1237G:p.P413A,ENSG00000197079:ENST00000393989:exon7:c.C1327G:p.P443A	Score=378;Name=lod=46	NA	17q21.2	Score=905;Name=V$SP1_Q6	NA	NA	NA	rs2071601	0.52	0.52	0.474	0.548323	0.5388	0.3462	0.5432	0.6354	0.6524	0.54	0.31	0.6	0.66	0.5675	0.66	0.08	T	0.038	B	0.022	B	0.001	D	0.021	P	1.795	L	-1.38	T	-0.897	T	0.000	T	0.248	2.905	15.68	5.41	2.816	4.118	14.573	2.905373	2.905373	0.02	0.544617	0.617678	NA	0.565	NA	11.6824164
486	20	31673846	31673846	A	G	exonic	BPIFB4	NA	nonsynonymous SNV	BPIFB4:NM_182519:exon5:c.A802G:p.I268V	exonic	ENSG00000186191	NA	nonsynonymous SNV	ENSG00000186191:ENST00000375483:exon5:c.A802G:p.I268V	Score=439;Name=lod=81	NA	20q11.21	Score=860;Name=V$STAT5A_01	NA	NA	NA	rs2070325	0.47	0.47	0.42	0.465455	0.3797	0.7569	0.4611	0.2693	0.5215	0.39	0.76	0.43	0.29	0.4094	0.76	0.15	T	0.677	P	0.42	B	0.001	N	0.457	P	1.445	L	3.29	T	-1.175	T	0.000	T	0.245	2.766	15.21	3.94	1.649	3.418	9.115	2.766176	2.766176	0.06	0.36186	0.266228	NA	0.435	NA	11.6823734
486	4	156289917	156289917	G	A	exonic	MAP9	NA	nonsynonymous SNV	MAP9:NM_001039580:exon5:c.C529T:p.R177W	exonic	ENSG00000164114	NA	nonsynonymous SNV	ENSG00000164114:ENST00000379248:exon4:c.C310T:p.R104W,ENSG00000164114:ENST00000311277:exon5:c.C529T:p.R177W,ENSG00000164114:ENST00000424373:exon5:c.C529T:p.R177W,ENSG00000164114:ENST00000433024:exon5:c.C526T:p.R176W,ENSG00000164114:ENST00000515654:exon5:c.C529T:p.R177W	Score=391;Name=lod=52	NA	4q32.1	NA	NA	NA	NA	rs3733391	0.16	0.16	0.156	0.169529	0.2406	0.2054	0.1282	0.0197	0.2914	0.22	0.21	0.14	0.02	0.2074	0.22	0.04	D	0.116	B	0.011	B	0.736	N	0.184	P	2.045	M	1.98	T	-1.088	T	0.000	T	0.256	1.968	12.54	3.12	0.496	2.687	6.310	1.968422	1.968422	0.06	0.206628	0.051067	ID=COSM1428168;OCCURENCE=1(large_intestine)	0.123	NA	11.6787054
486	8	121013770	121013770	A	G	exonic	DEPTOR	NA	nonsynonymous SNV	DEPTOR:NM_022783:exon5:c.A611G:p.N204S	exonic	ENSG00000155792	NA	nonsynonymous SNV	ENSG00000155792:ENST00000523492:exon3:c.A308G:p.N103S,ENSG00000155792:ENST00000286234:exon5:c.A611G:p.N204S	Score=483;Name=lod=122	NA	8q24.12	Score=759;Name=V$MEF2_01	NA	NA	NA	rs2271900	0.68	0.68	0.657	0.641174	0.7296	0.7093	0.7219	0.4743	0.6483	0.74	0.73	0.73	0.46	0.7032	0.74	0.39	T	0.507	P	0.338	B	0.000	D	0.000	P	1.175	L	2.49	T	-1.122	T	0.000	T	0.191	2.346	13.8	3.58	1.112	4.774	8.909	2.345632	2.345632	0.31	0.722093	0.509986	NA	0.725	NA	11.6784404
486	5	174156168	174156168	T	C	exonic	MSX2	NA	nonsynonymous SNV	MSX2:NM_002449:exon2:c.T386C:p.M129T	exonic	ENSG00000120149	NA	nonsynonymous SNV	ENSG00000120149:ENST00000239243:exon2:c.T386C:p.M129T	Score=571;Name=lod=278	NA	5q35.2	Score=864;Name=V$GR_Q6	NA	Name=3	NA	rs4242182	0.79	0.79	0.757	0.765775	0.8797	0.9821	0.8516	0.3578	0.9162	0.89	0.98	0.84	0.37	0.8757	0.98	0.2	T	0.0	B	0.001	B	0.005	N	0.000	P	0.805	L	-3.71	D	-0.907	T	0.000	T	0.076	1.698	11.64	5.28	2.219	4.549	15.368	1.698414	1.698414	0.14	0.901395	0.470041	NA	0.71	NA	11.6765384
486	15	82555242	82555242	A	G	exonic	FAM154B	NA	nonsynonymous SNV	FAM154B:NM_001008226:exon1:c.A22G:p.S8G	exonic	ENSG00000188659	NA	nonsynonymous SNV	ENSG00000188659:ENST00000339465:exon1:c.A22G:p.S8G,ENSG00000188659:ENST00000566205:exon1:c.A22G:p.S8G,ENSG00000188659:ENST00000566861:exon1:c.A22G:p.S8G	Score=309;Name=lod=24	NA	15q25.2	NA	Name=Sin3Ak-20,Pbx3,ZNF263,c-Fos,ELK4,Pol2,Mxi1_(bHLH),SREBP1,ELF1_(SC-631)	Name=145	NA	rs11631813	0.17	0.17	0.165	0.207867	0.2028	0.1637	0.1282	0.1354	0.4131	0.22	0.17	0.14	0.11	0.2836	0.22	0.95	T	0.042	B	0.029	B	0.756	U	0.000	P	0	N	2.46	T	-0.962	T	0.000	T	0.044	2.195	13.3	1.95	1.480	1.720	8.206	2.195442	2.195442	0.14	0.170698	0.144156	NA	0.217	NA	11.6762354
486	22	50686371	50686371	C	T	exonic	HDAC10	NA	nonsynonymous SNV	HDAC10:NM_001159286:exon12:c.G1225A:p.V409I,HDAC10:NM_032019:exon13:c.G1285A:p.V429I	exonic	ENSG00000100429	NA	nonsynonymous SNV	ENSG00000100429:ENST00000448072:exon11:c.G1135A:p.V379I,ENSG00000100429:ENST00000454936:exon11:c.G1135A:p.V379I,ENSG00000100429:ENST00000349505:exon12:c.G1225A:p.V409I,ENSG00000100429:ENST00000216271:exon13:c.G1285A:p.V429I	NA	NA	22q13.33	NA	Name=JunD,c-Fos,ZNF263,c-Jun,ELF1_(SC-631),eGFP-JunD,USF1_(SC-8983),Mxi1_(bHLH),Pol2	Name=104	NA	rs34402301	0.03	0.03	0.021	0.0191693	0.0557	NA	0.0432	0.003	0.0061	0.06	NA	0.05	0.0041	0.0418	0.06	0.37	T	0.99	D	0.555	P	0.295	N	1.000	N	2.34	M	1.57	T	-1.066	T	0.015	T	0.129	2.389	13.95	1.1	0.204	0.055	6.052	2.388992	2.388992	0.03	0.06	0.010894	NA	NA	NA	11.6758334
487	19	17366313	17366313	C	T	exonic	USHBP1	NA	nonsynonymous SNV	USHBP1:NM_031941:exon10:c.G1573A:p.V525M	exonic	ENSG00000130307	NA	nonsynonymous SNV	ENSG00000130307:ENST00000431146:exon9:c.G1381A:p.V461M,ENSG00000130307:ENST00000252597:exon10:c.G1573A:p.V525M	NA	NA	19p13.11	NA	Name=BHLHE40,USF-1	Name=39	NA	rs12459398	0.27	0.27	0.275	0.269169	0.2197	0.2788	0.268	0.3132	0.2515	0.21	0.27	0.24	0.36	0.2353	0.36	0.11	T	0.047	B	0.004	B	0.040	N	1.000	P	0.69	N	2.25	T	-0.956	T	0.000	T	0.063	0.423	6.299	-5.46	-1.191	-1.146	8.565	0.423219	NA	0.09	0.203488	0.305946	NA	0.283	NA	11.6748454
487	9	100823135	100823135	G	C	exonic	NANS	NA	nonsynonymous SNV	NANS:NM_018946:exon2:c.G204C:p.E68D	exonic	ENSG00000095380	NA	nonsynonymous SNV	ENSG00000095380:ENST00000210444:exon2:c.G204C:p.E68D	Score=597;Name=lod=356	NA	9q22.33	Score=753;Name=V$STAT5A_02	NA	NA	NA	rs1058446	0.23	0.23	0.233	0.192292	0.2207	0.2004	0.2622	0.2224	0.0644	0.22	0.22	0.24	0.24	0.1988	0.24	0.32	T	0.0	B	0.006	B	0.000	D	0.001	P	-0.505	N	0.95	T	-1.002	T	0.000	T	0.12	2.077	12.9	2.95	0.470	2.315	9.694	2.077207	2.077207	0.54	0.241279	0.212665	NA	0.239	NA	11.6725544
487	13	24167505	24167505	T	A	exonic	TNFRSF19	NA	nonsynonymous SNV	TNFRSF19:NM_001204458:exon3:c.T91A:p.S31T,TNFRSF19:NM_018647:exon3:c.T91A:p.S31T,TNFRSF19:NM_148957:exon3:c.T91A:p.S31T	exonic	ENSG00000127863	NA	nonsynonymous SNV	ENSG00000127863:ENST00000248484:exon3:c.T91A:p.S31T,ENSG00000127863:ENST00000382258:exon3:c.T91A:p.S31T,ENSG00000127863:ENST00000382263:exon3:c.T91A:p.S31T	Score=452;Name=lod=92	NA	13q12.12	NA	NA	Name=7	NA	rs9550987	0.26	0.26	0.271	0.27516	0.2217	0.2421	0.1888	0.413	0.2393	0.22	0.27	0.2	0.34	0.2269	0.37	1	T	0.0	B	0.0	B	0.000	N	0.000	P	-1.64	N	1.97	T	-0.937	T	0.000	T	0.05	0.39	6.12	5.3	0.962	3.731	9.796	0.390465	NA	1	0.216512	0.368588	NA	0.341	NA	11.6682214
487	1	227921376	227921376	C	T	exonic	JMJD4	NA	synonymous SNV	JMJD4:NM_001161465:exon4:c.G699A:p.P233P,JMJD4:NM_023007:exon4:c.G699A:p.P233P	exonic	ENSG00000081692	NA	synonymous SNV	ENSG00000081692:ENST00000366758:exon4:c.G699A:p.P233P,ENSG00000081692:ENST00000438896:exon4:c.G699A:p.P233P	NA	NA	1q42.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00002534	NA	.	.	.	.	.	.	.	.	1.000	D	.	.	.	.	-0.853	T	0.140	T	.	-0.045	3.784	-8.45	-1.873	-3.526	7.639	-0.045005	NA	NA	NA	NA	NA	NA	NA	11.6666413
488	17	56584508	56584508	T	C	exonic	MTMR4	NA	nonsynonymous SNV	MTMR4:NM_004687:exon9:c.A838G:p.S280G	exonic	ENSG00000108389	NA	nonsynonymous SNV	ENSG00000108389:ENST00000323456:exon9:c.A838G:p.S280G,ENSG00000108389:ENST00000579925:exon9:c.A838G:p.S280G	NA	NA	17q22	NA	Name=HNF4A	NA	NA	rs2302190	0.28	0.28	0.282	0.328075	0.2187	0.3214	0.1398	0.4652	0.3957	0.22	0.29	0.16	0.44	0.2462	0.44	0.64	T	0.0	B	0.005	B	0.000	D	0.998	P	0	N	-3.25	D	-1.056	T	0.000	T	0.095	0.585	7.155	4.09	0.914	1.581	10.708	0.584622	NA	0.62	0.203488	0.417612	NA	0.188	NA	11.6649454
488	18	66513615	66513615	A	G	exonic	CCDC102B	NA	nonsynonymous SNV	CCDC102B:NM_024781:exon4:c.A893G:p.K298R,CCDC102B:NM_001093729:exon6:c.A893G:p.K298R	exonic	ENSG00000150636	NA	nonsynonymous SNV	ENSG00000150636:ENST00000584156:exon3:c.A893G:p.K298R,ENSG00000150636:ENST00000319445:exon4:c.A893G:p.K298R,ENSG00000150636:ENST00000360242:exon4:c.A893G:p.K298R,ENSG00000150636:ENST00000584775:exon6:c.A893G:p.K298R	Score=435;Name=lod=78	NA	18q22.1	NA	NA	NA	NA	rs2187094	0.39	0.39	0.319	0.367812	0.4006	0.6438	0.4467	0.0703	0.3957	0.39	0.63	0.43	0.08	0.3888	0.63	0.47	T	0.889	P	0.399	B	0.000	D	0.000	P	1.125	L	2.44	T	-1.060	T	0.000	T	0.262	0.956	8.901	4.4	1.043	2.635	9.504	0.956416	NA	0.26	0.382442	0.127326	ID=COSM148442;OCCURENCE=1(breast),1(stomach)	0.384	NA	11.6614914
488	20	31652292	31652292	G	A	exonic	BPIFB3	NA	nonsynonymous SNV	BPIFB3:NM_182658:exon7:c.G682A:p.V228M	exonic	ENSG00000186190	NA	nonsynonymous SNV	ENSG00000186190:ENST00000375494:exon7:c.G682A:p.V228M	Score=397;Name=lod=55	NA	20q11.21	NA	NA	NA	NA	rs4911290	0.49	0.49	0.454	0.490016	0.3867	0.756	0.4755	0.3464	0.5266	0.39	0.75	0.44	0.36	0.4225	0.75	0	D	0.472	P	0.181	B	0.034	N	0.998	P	2.135	M	3.27	T	-1.117	T	0.000	T	0.194	0.779	8.111	2.63	0.569	1.284	13.137	0.778703	NA	0	0.365233	0.328416	NA	0.457	NA	11.6589004
488	11	102272839	102272839	C	A	exonic	TMEM123	NA	nonsynonymous SNV	TMEM123:NM_052932:exon3:c.G256T:p.V86F	exonic	ENSG00000152558	NA	nonsynonymous SNV	ENSG00000152558:ENST00000361236:exon2:c.G199T:p.V67F,ENSG00000152558:ENST00000398136:exon3:c.G256T:p.V86F,ENSG00000152558:ENST00000526676:exon4:c.G130T:p.V44F	NA	NA	11q22.2	NA	NA	NA	NA	rs11547915	0.03	0.03	0.026	0.0195687	0.0616	0.004	0.0274	0.0015	0.0112	0.07	0.0035	0.02	0.0041	0.0449	0.071	0.03	D	0.848	P	0.423	B	0.000	N	1.000	N	0.69	N	1.82	T	-1.063	T	0.010	T	0.274	3.117	16.42	-4.21	-1.099	-2.354	1.637	3.117415	3.117415	0.02	0.070559	0.011846	NA	0.014	NA	11.6562744
489	3	124438188	124438188	C	T	exonic	KALRN	NA	synonymous SNV	KALRN:NM_007064:exon27:c.C3741T:p.S1247S,KALRN:NM_001024660:exon60:c.C8832T:p.S2944S	exonic	ENSG00000160145	NA	synonymous SNV	ENSG00000160145:ENST00000428018:exon26:c.C3645T:p.S1215S,ENSG00000160145:ENST00000291478:exon27:c.C3741T:p.S1247S,ENSG00000160145:ENST00000360013:exon60:c.C8832T:p.S2944S	Score=573;Name=lod=285	NA	3q21.2	NA	NA	NA	NA	rs56410073	0.0005	0.0005	NA	0.00159744	0.005	0.001	0.0029	NA	NA	0.0013	NA	NA	NA	0.0028	0.0044	.	.	.	.	.	.	.	.	1.000	D	.	.	.	.	-0.772	T	0.223	T	.	0.525	6.844	4.42	1.445	1.953	9.625	0.524926	NA	NA	0.004419	0.001816	NA	NA	NA	11.6544476
489	10	4889403	4889403	C	T	exonic	AKR1E2	NA	stopgain	AKR1E2:NM_001271025:exon6:c.C607T:p.R203X,AKR1E2:NM_001271021:exon7:c.C730T:p.R244X,AKR1E2:NM_001040177:exon9:c.C901T:p.R301X	exonic	ENSG00000165568	NA	stopgain	ENSG00000165568:ENST00000345253:exon6:c.C607T:p.R203X,ENSG00000165568:ENST00000334019:exon7:c.C730T:p.R244X,ENSG00000165568:ENST00000532248:exon7:c.C730T:p.R244X,ENSG00000165568:ENST00000298375:exon9:c.C901T:p.R301X,ENSG00000165568:ENST00000463345:exon9:c.C901T:p.R301X,ENSG00000165568:ENST00000474119:exon9:c.C589T:p.R197X	NA	NA	10p15.1	NA	NA	NA	NA	rs12240276	0.08	0.08	0.069	0.0784744	0.1342	NA	0.0879	0.1006	0.0654	0.12	NA	0.09	0.09	0.0968	0.12	1	T	.	.	.	.	0.000	D	0.000	P	.	.	.	.	.	.	.	.	.	1.503	10.97	4.47	2.490	3.131	15.052	1.502954	1.502954	1	0.115116	0.098956	NA	0.174	NA	11.653884
489	2	130911901	130911901	C	T	exonic	SMPD4	NA	synonymous SNV	SMPD4:NM_001171083:exon13:c.G1419A:p.E473E,SMPD4:NM_017751:exon15:c.G1638A:p.E546E,SMPD4:NM_017951:exon16:c.G1725A:p.E575E	exonic	ENSG00000136699	NA	synonymous SNV	ENSG00000136699:ENST00000457039:exon5:c.G516A:p.E172E,ENSG00000136699:ENST00000426662:exon8:c.G633A:p.E211E,ENSG00000136699:ENST00000443958:exon9:c.G717A:p.E239E,ENSG00000136699:ENST00000453750:exon9:c.G972A:p.E324E,ENSG00000136699:ENST00000452225:exon11:c.G948A:p.E316E,ENSG00000136699:ENST00000431183:exon13:c.G1419A:p.E473E,ENSG00000136699:ENST00000339679:exon14:c.G1299A:p.E433E,ENSG00000136699:ENST00000351288:exon15:c.G1638A:p.E546E,ENSG00000136699:ENST00000409031:exon16:c.G1725A:p.E575E	Score=583;Name=lod=311	NA	2q21.1	NA	NA	NA	NA	rs11887653	0.03	0.03	0.013	0.0297524	0.004	0.001	0.0173	0.0998	NA	0.004	0.0017	0.01	0.09	0.0106	0.09	.	.	.	.	.	.	.	.	1.000	D	.	.	.	.	-1.078	T	0.015	T	.	0.821	8.308	3.77	1.623	1.816	13.096	0.821464	NA	NA	0.001977	0.0875	NA	0.022	NA	11.6500896
490	16	54318172	54318172	C	A	exonic	IRX3	NA	nonsynonymous SNV	IRX3:NM_024336:exon3:c.G1437T:p.Q479H	exonic	ENSG00000177508	NA	nonsynonymous SNV	ENSG00000177508:ENST00000558054:exon2:c.G125T:p.S42I,ENSG00000177508:ENST00000329734:exon3:c.G1437T:p.Q479H	Score=622;Name=lod=448	NA	16q12.2	Score=758;Name=V$E2F_01	NA	Name=28	NA	rs1126960	0.17	0.17	0.164	0.154553	0.2455	0.0169	0.1931	0.1732	0.1503	0.25	0.02	0.22	0.18	0.2021	0.25	0.08	T	0.053	B	0.016	B	0.268	N	0.768	P	1.095	L	0.58	T	-1.077	T	0.000	T	0.149	2.53	14.42	4.1	1.058	0.377	7.686	2.529864	2.529864	0.2	0.243023	0.193358	NA	0.268	NA	11.6427104
490	14	21790040	21790040	G	T	exonic	RPGRIP1	NA	nonsynonymous SNV	RPGRIP1:NM_020366:exon13:c.G1639T:p.A547S	exonic	ENSG00000092200	NA	nonsynonymous SNV	ENSG00000092200:ENST00000554303:exon2:c.G58T:p.A20S,ENSG00000092200:ENST00000555587:exon2:c.G64T:p.A22S,ENSG00000092200:ENST00000382933:exon4:c.G565T:p.A189S,ENSG00000092200:ENST00000206660:exon13:c.G1639T:p.A547S,ENSG00000092200:ENST00000400017:exon13:c.G1639T:p.A547S,ENSG00000092200:ENST00000556336:exon13:c.G1558T:p.A520S,ENSG00000092200:ENST00000557771:exon13:c.G1558T:p.A520S	Score=284;Name=lod=19	NA	14q11.2	NA	NA	NA	NA	rs10151259	0.16	0.16	0.167	0.167332	0.2366	0.004	0.1412	0.2315	0.1963	0.24	NA	0.15	0.23	0.2105	0.25	0.29	T	1.0	D	0.999	D	0.004	N	0.000	P	1.64	L	-0.1	T	-1.048	T	0.000	T	0.118	2.344	13.8	3.04	0.777	0.774	5.699	2.344142	2.344142	0.34	0.245258	0.204918	NA	0.167	CLINSIG=pathogenic|untested;CLNDBN=Cone-rod_dystrophy_13|not_provided;CLNREVSTAT=mult|not;CLNACC=RCV000005275.2|RCV000086240.1;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet|.;CLNDSDBID=NBK1298:C2750720:608194:ORPHA1872|.	11.6409754
490	19	5455800	5455800	G	A	exonic	ZNRF4	NA	nonsynonymous SNV	ZNRF4:NM_181710:exon1:c.G298A:p.V100I	exonic	ENSG00000105428	NA	nonsynonymous SNV	ENSG00000105428:ENST00000222033:exon1:c.G298A:p.V100I	NA	NA	19p13.3	NA	NA	NA	NA	rs2240745	0.08	0.08	0.072	0.0788738	0.0656	0.1845	0.0259	0.0045	0.1217	0.06	0.2	0.03	0.0041	0.07	0.2	0.78	T	0.989	D	0.696	P	0.334	U	1.000	P	0.74	N	3.59	T	-0.969	T	0.000	T	0.035	0.866	8.511	3.63	1.576	1.969	10.79	0.866465	NA	0.33	0.061273	0.014098	NA	0.094	NA	11.6364604
491	6	43100373	43100373	C	T	exonic	PTK7	NA	synonymous SNV	PTK7:NM_001270398:exon7:c.C1200T:p.H400H,PTK7:NM_002821:exon7:c.C1176T:p.H392H,PTK7:NM_152880:exon7:c.C1176T:p.H392H,PTK7:NM_152881:exon7:c.C1176T:p.H392H,PTK7:NM_152882:exon7:c.C1176T:p.H392H	exonic	ENSG00000112655	NA	synonymous SNV	ENSG00000112655:ENST00000481946:exon3:c.C435T:p.H145H,ENSG00000112655:ENST00000230418:exon7:c.C1176T:p.H392H,ENSG00000112655:ENST00000230419:exon7:c.C1176T:p.H392H,ENSG00000112655:ENST00000345201:exon7:c.C1176T:p.H392H,ENSG00000112655:ENST00000349241:exon7:c.C1176T:p.H392H,ENSG00000112655:ENST00000352931:exon7:c.C1176T:p.H392H,ENSG00000112655:ENST00000471863:exon7:c.C1176T:p.H392H,ENSG00000112655:ENST00000481273:exon7:c.C1200T:p.H400H	NA	NA	6p21.1	Score=891;Name=V$E47_02	NA	NA	NA	rs56004029	0.01	0.01	0.004	0.0129792	0.006	0.003	0.0259	0.0008	0.0378	0.01	NA	0.02	0.002	0.0205	0.022	0	D	.	.	.	.	.	.	1.000	D	.	.	.	.	-0.070	T	0.267	T	.	0.624	7.354	-10.0	-2.408	-1.211	17.759	0.623517	NA	NA	0.00593	0.001362	NA	0.029	NA	11.6342366
491	20	31676804	31676804	A	C	exonic	BPIFB4	NA	nonsynonymous SNV	BPIFB4:NM_182519:exon6:c.A959C:p.N320T	exonic	ENSG00000186191	NA	nonsynonymous SNV	ENSG00000186191:ENST00000375483:exon6:c.A959C:p.N320T	Score=485;Name=lod=125	NA	20q11.21	NA	NA	NA	NA	rs2889732	0.55	0.55	0.546	0.551518	0.3917	0.753	0.4971	0.5703	0.5215	0.4	0.76	0.47	0.6	0.4388	0.76	0.29	T	0.979	D	0.675	P	0.003	N	0.437	P	0.345	N	3.53	T	-1.248	T	0.000	T	0.182	4.102	21.1	5.01	1.887	3.261	11.107	4.101996	4.101996	0.2	0.370698	0.5202	NA	0.536	NA	11.6321354
491	3	133371471	133371471	G	A	exonic	TOPBP1	NA	nonsynonymous SNV	TOPBP1:NM_007027:exon8:c.C925T:p.R309C	exonic	ENSG00000163781	NA	nonsynonymous SNV	ENSG00000163781:ENST00000260810:exon8:c.C925T:p.R309C	Score=510;Name=lod=157	NA	3q22.1	NA	NA	NA	NA	rs55633281	0.05	0.05	0.044	0.0391374	0.0765	0.001	0.0591	0.0461	0.0164	0.07	0.0017	0.07	0.04	0.0533	0.076	0.06	T	0.488	P	0.074	B	0.001	N	0.011	P	1.59	L	2.64	T	-1.054	T	0.002	T	0.069	2.669	14.89	3.9	1.426	3.469	12.933	2.669114	2.669114	0.01	0.07629	0.04343	ID=COSM1419178,COSM1419177;OCCURENCE=1(large_intestine)	0.08	NA	11.6272434
492	15	43023482	43023482	T	C	exonic	CDAN1	NA	nonsynonymous SNV	CDAN1:NM_138477:exon12:c.A1787G:p.Q596R	exonic	ENSG00000140326	NA	nonsynonymous SNV	ENSG00000140326:ENST00000356231:exon12:c.A1787G:p.Q596R	Score=598;Name=lod=358	NA	15q15.2	NA	NA	NA	NA	rs12917189	0.39	0.39	0.429	0.453674	0.2068	0.2589	0.1729	0.9531	0.4325	0.22	0.25	0.18	0.95	0.2933	0.95	0.9	T	0.0	B	0.0	B	0.002	N	1.000	P	-1.06	N	-2.1	D	-0.944	T	0.000	T	0.086	0.36	5.952	4.05	0.421	2.077	4.659	0.359651	NA	0.47	0.209933	0.818883	NA	0.428	CLINSIG=non-pathogenic;CLNDBN=Congenital_dyserythropoietic_anemia\x2c_type_I;CLNREVSTAT=single;CLNACC=RCV000020952.1;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet:SNOMED_CT;CLNDSDBID=NBK5313:C0271933:224120:ORPHA98869:59548005	11.6233004
492	2	242707195	242707195	C	A	exonic	D2HGDH	NA	synonymous SNV	D2HGDH:NM_152783:exon10:c.C1377A:p.P459P	exonic	ENSG00000180902	NA	synonymous SNV	ENSG00000180902:ENST00000403782:exon9:c.C975A:p.P325P,ENSG00000180902:ENST00000321264:exon10:c.C1377A:p.P459P	Score=508;Name=lod=155	NA	2q37.3	NA	NA	NA	NA	rs143940595	0.01	0.01	0.004	0.00559105	0.0169	NA	0.0115	0.0015	0.001	0.02	NA	0.01	NA	0.0137	0.02	0.11	T	.	.	.	.	0.000	D	1.000	D	.	.	-1.75	D	-0.596	T	0.278	T	.	0.319	5.731	0.168	0.004	-1.633	2.366	0.319253	NA	NA	0.017113	0.003404	NA	0.007	NA	11.6189536
493	5	79027700	79027700	T	C	exonic	CMYA5	NA	nonsynonymous SNV	CMYA5:NM_153610:exon2:c.T3112C:p.F1038L	exonic	ENSG00000164309	NA	nonsynonymous SNV	ENSG00000164309:ENST00000446378:exon2:c.T3112C:p.F1038L	NA	NA	5q14.1	NA	NA	NA	NA	rs62621915	0.16	0.16	0.163	0.131789	0.0596	0.3621	0.0389	0.093	0.0869	0.06	0.41	0.04	0.11	0.0948	0.41	0.48	T	0.988	D	0.675	P	0.082	N	1.000	P	1.845	L	-0.25	T	-0.956	T	0.000	T	0.197	1.398	10.61	5.88	2.252	0.990	14.532	1.39822	1.39822	0.52	0.065007	0.078892	NA	0.167	NA	11.6139264
494	6	32548632	32548632	T	A	exonic	HLA-DRB1	NA	nonsynonymous SNV	HLA-DRB1:NM_002124:exon4:c.A654T:p.R218S	exonic	ENSG00000196126	NA	nonsynonymous SNV	ENSG00000196126:ENST00000360004:exon4:c.A654T:p.R218S	Score=333;Name=lod=30	NA	6p21.32	NA	NA	NA	NA	rs78817721	NA	NA	0.244	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2288	0.033	0.04	D	0.945	P	0.25	B	0.192	N	1.000	D	2.08	M	3.17	T	-0.941	T	0.010	T	0.627	0.751	7.979	1.02	-0.038	-0.892	7.066	0.750737	NA	0.05	NA	NA	NA	0.022	NA	11.6045334
494	13	53286950	53286950	C	T	exonic	LECT1	NA	nonsynonymous SNV	LECT1:NM_001011705:exon5:c.G523A:p.V175I,LECT1:NM_007015:exon5:c.G523A:p.V175I	exonic	ENSG00000136110	NA	nonsynonymous SNV	ENSG00000136110:ENST00000431550:exon4:c.G289A:p.V97I,ENSG00000136110:ENST00000377962:exon5:c.G523A:p.V175I,ENSG00000136110:ENST00000448904:exon5:c.G523A:p.V175I	Score=436;Name=lod=79	NA	13q14.3	NA	NA	NA	NA	rs7330220	0.06	0.06	0.066	0.0698882	0.0726	NA	0.0562	0.1452	0.047	0.08	NA	0.05	0.12	0.0726	0.14	0.02	D	0.679	P	0.348	B	0.016	N	0.999	P	0.69	N	-1.31	T	-0.949	T	0.004	T	0.106	2.958	15.86	3.36	0.545	2.845	9.504	2.958266	2.958266	0.01	0.084767	0.140944	NA	0.138	NA	11.6033664
494	3	14755572	14755572	A	G	exonic	C3orf20	NA	nonsynonymous SNV	C3orf20:NM_001184957:exon8:c.A853G:p.I285V,C3orf20:NM_001184958:exon8:c.A853G:p.I285V,C3orf20:NM_032137:exon8:c.A1219G:p.I407V	exonic	ENSG00000131379	NA	nonsynonymous SNV	ENSG00000131379:ENST00000253697:exon8:c.A1219G:p.I407V,ENSG00000131379:ENST00000412910:exon8:c.A853G:p.I285V,ENSG00000131379:ENST00000435614:exon8:c.A853G:p.I285V	Score=304;Name=lod=23	NA	3p25.1	Score=945;Name=V$GATA1_01	NA	NA	NA	rs6765537	0.41	0.41	0.398	0.378195	0.4155	0.3244	0.4524	0.4244	0.2802	0.42	0.33	0.43	0.47	0.3915	0.47	0.36	T	0.506	P	0.225	B	0.002	N	0.961	P	2.08	M	2.74	T	-0.917	T	0.000	T	0.063	3.123	16.44	4.41	0.942	2.190	8.233	3.123451	3.123451	0.43	0.42314	0.431003	NA	0.449	NA	11.6031934
495	11	48266736	48266736	C	G	exonic	OR4X2	NA	stopgain	OR4X2:NM_001004727:exon1:c.C81G:p.Y27X	exonic	ENSG00000172208	NA	stopgain	ENSG00000172208:ENST00000302329:exon1:c.C81G:p.Y27X	Score=346;Name=lod=34	NA	11p11.2	NA	NA	NA	NA	rs7120775	0.17	0.17	0.157	0.17472	0.1252	0.1627	0.1268	0.2882	0.1186	0.13	0.16	0.13	0.26	0.1476	0.27	1	T	.	.	.	.	0.000	D	0.000	P	.	.	.	.	.	.	.	.	.	3.645	18.54	2.46	1.255	-0.233	6.823	3.645426	3.645426	0	0.132271	0.268741	ID=COSM147190;OCCURENCE=1(stomach)	0.174	NA	11.594929
495	2	219509618	219509618	C	A	exonic	ZNF142	NA	nonsynonymous SNV	ZNF142:NM_001105537:exon8:c.G1621T:p.A541S	exonic	ENSG00000115568	NA	nonsynonymous SNV	ENSG00000115568:ENST00000411696:exon7:c.G1621T:p.A541S,ENSG00000115568:ENST00000449707:exon8:c.G1621T:p.A541S	NA	NA	2q35	Score=916;Name=V$E47_01	Name=CTCF	Name=5	NA	rs2230115	0.53	0.53	0.479	0.516374	0.5934	0.8194	0.5879	0.0711	0.6759	0.6	0.79	0.6	0.07	0.5741	0.79	0.55	T	0.732	P	0.505	P	0.036	N	1.000	P	1.7	L	2.78	T	-1.162	T	0.000	T	0.074	0.772	8.081	5.08	1.528	0.775	10.901	0.772438	NA	0.15	0.577488	0.166819	NA	0.37	NA	11.5883454
496	9	79324741	79324741	T	C	exonic	PRUNE2	NA	nonsynonymous SNV	PRUNE2:NM_015225:exon8:c.A2449G:p.N817D	exonic	ENSG00000106772	NA	nonsynonymous SNV	ENSG00000106772:ENST00000376718:exon8:c.A2449G:p.N817D,ENSG00000106772:ENST00000428286:exon8:c.A1372G:p.N458D	Score=391;Name=lod=52	NA	9q21.2	Score=766;Name=V$STAT5A_02	NA	NA	NA	rs557352	0.48	0.48	0.43	0.461861	0.5885	0.3601	0.6412	0.2995	0.5286	0.58	0.37	0.64	0.33	0.562	0.64	0.24	T	0.379	B	0.093	B	0.000	D	0.000	P	1.04	L	1.89	T	-0.987	T	0.000	T	0.116	0.686	7.668	5.65	2.152	1.282	10.486	0.686425	NA	0.25	0.60483	0.368622	NA	0.522	NA	11.5780034
496	1	11906068	11906068	A	G	exonic	NPPA	NA	stoploss	NPPA:NM_006172:exon3:c.T454C:p.X152R	exonic	ENSG00000175206	NA	stoploss	ENSG00000175206:ENST00000376476:exon3:c.T304C:p.X102R,ENSG00000175206:ENST00000376480:exon3:c.T454C:p.X152R	Score=378;Name=lod=46	NA	1p36.22	Score=767;Name=V$MEF2_04	Name=CTCF,NRSF	Name=68	NA	rs5065	0.14	0.14	0.143	0.179113	0.1233	0.0129	0.1138	0.4183	0.1309	0.11	0.01	0.11	0.35	0.1437	0.41	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	.	.	.	.	.	0.315	5.706	0.954	0.041	0.306	2.125	0.314728	NA	0.62	0.155233	0.408534	NA	0.188	NA	11.577767
496	10	15649698	15649698	T	G	exonic	ITGA8	NA	nonsynonymous SNV	ITGA8:NM_003638:exon17:c.A1742C:p.Q581P	exonic	ENSG00000077943	NA	nonsynonymous SNV	ENSG00000077943:ENST00000378076:exon17:c.A1742C:p.Q581P	Score=355;Name=lod=37	NA	10p13	Score=793;Name=V$GFI1_01	NA	NA	NA	rs9333269	0.05	0.05	0.037	0.0325479	0.0974	NA	0.0591	0.0053	0.0174	0.1	NA	0.08	0.01	0.0689	0.1	0.27	T	0.545	P	0.362	B	0.122	N	0.990	N	1.78	L	0.78	T	-1.085	T	0.004	T	0.352	0.958	8.908	-2.03	-1.017	0.007	7.953	0.958115	NA	0.04	0.090349	0.01566	ID=COSM146891;OCCURENCE=1(stomach)	0.065	NA	11.5766844
497	11	20648380	20648380	G	A	exonic	SLC6A5	NA	nonsynonymous SNV	SLC6A5:NM_004211:exon8:c.G1387A:p.D463N	exonic	ENSG00000165970	NA	nonsynonymous SNV	ENSG00000165970:ENST00000525748:exon8:c.G1387A:p.D463N	Score=464;Name=lod=103	NA	11p15.1	NA	NA	NA	NA	rs1805091	0.18	0.18	0.17	0.16274	0.2505	0.0883	0.1787	0.1165	0.2004	0.25	0.09	0.21	0.17	0.2258	0.29	0.18	T	0.094	B	0.145	B	0.000	D	0.000	P	1.05	L	-0.85	T	-1.128	T	0.000	T	0.114	4.096	21.1	6.04	2.873	9.869	20.174	4.096148	4.096148	0.21	0.287209	0.125057	ID=COSM1353177;OCCURENCE=1(large_intestine)	0.188	NA	11.5698244
497	5	68616331	68616331	C	T	exonic	CCDC125	NA	nonsynonymous SNV	CCDC125:NM_176816:exon1:c.G37A:p.V13M	exonic	ENSG00000183323	NA	nonsynonymous SNV	ENSG00000183323:ENST00000396499:exon1:c.G37A:p.V13M,ENSG00000183323:ENST00000383374:exon2:c.G37A:p.V13M,ENSG00000183323:ENST00000396496:exon2:c.G37A:p.V13M	NA	NA	5q13.2	NA	NA	Name=2	NA	rs10471774	0.31	0.31	0.274	0.260583	0.4543	0.2837	0.2968	0.062	0.2802	0.47	0.27	0.37	0.06	0.3684	0.47	0.11	T	0.994	D	0.649	P	0.631	N	0.987	P	1.39	L	0.91	T	-0.914	T	0.000	T	0.045	2.993	15.98	4.02	1.170	2.597	11.374	2.992915	2.992915	0.04	0.44314	0.131185	NA	0.239	NA	11.5674934
498	3	169514585	169514585	A	T	exonic	LRRC34	NA	nonsynonymous SNV	LRRC34:NM_153353:exon7:c.T760A:p.L254I,LRRC34:NM_001172779:exon8:c.T856A:p.L286I,LRRC34:NM_001172780:exon8:c.T856A:p.L286I	exonic	ENSG00000171757	NA	nonsynonymous SNV	ENSG00000171757:ENST00000528597:exon1:c.T103A:p.L35I,ENSG00000171757:ENST00000316515:exon7:c.T721A:p.L241I,ENSG00000171757:ENST00000522526:exon7:c.T760A:p.L254I,ENSG00000171757:ENST00000446859:exon8:c.T856A:p.L286I,ENSG00000171757:ENST00000522830:exon8:c.T673A:p.L225I	NA	NA	3q26.2	Score=902;Name=V$HLF_01	NA	NA	NA	rs10936600	0.31	0.31	0.268	0.272963	0.2425	0.5784	0.353	0.0598	0.2209	0.25	0.59	0.29	0.09	0.2834	0.59	0.44	T	1.0	D	0.994	D	0.000	D	0.939	P	1.585	L	0.29	T	-0.919	T	0.000	T	0.586	1.828	12.07	-0.438	-0.269	1.045	12.056	1.827537	1.827537	0.07	0.247558	0.095778	NA	0.167	NA	11.5598754
498	2	112614429	112614429	G	A	exonic	ANAPC1	NA	stopgain	ANAPC1:NM_022662:exon12:c.C1393T:p.Q465X	exonic	ENSG00000153107	NA	stopgain	ENSG00000153107:ENST00000341068:exon12:c.C1393T:p.Q465X	Score=535;Name=lod=199	NA	2q13	NA	NA	NA	NA	rs72936240	NA	NA	0.293	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4426	NA	.	.	.	.	.	.	0.001	U	0.000	P	.	.	.	.	.	.	.	.	.	12.789	46	4.09	1.972	6.767	16.629	12.789264	12.789264	0.04	NA	NA	NA	NA	NA	11.5574
498	12	32860302	32860302	G	A	exonic	DNM1L	NA	synonymous SNV	DNM1L:NM_005690:exon3:c.G252A:p.G84G,DNM1L:NM_012062:exon3:c.G252A:p.G84G,DNM1L:NM_012063:exon3:c.G252A:p.G84G	exonic	ENSG00000087470	NA	nonsynonymous SNV	ENSG00000087470:ENST00000414834:exon4:c.G86A:p.G29E	Score=395;Name=lod=54	NA	12p11.21	Score=781;Name=V$TAXCREB_01	NA	NA	NA	rs2272238	0.14	0.14	0.131	0.14397	0.164	0.0833	0.1037	0.2103	0.1247	0.16	0.07	0.1	0.22	0.1328	0.22	0	D	0.0	B	0.0	B	0.111	U	0.000	P	.	.	-3.71	D	-0.881	T	0.001	T	.	2.895	15.65	-3.54	-0.090	-0.519	2.061	2.895173	2.895173	0	0.145906	0.195504	NA	0.094	NA	11.557294
498	13	31891746	31891746	G	A	exonic	B3GALTL	NA	nonsynonymous SNV	B3GALTL:NM_194318:exon13:c.G1108A:p.E370K	exonic	ENSG00000187676	NA	nonsynonymous SNV	ENSG00000187676:ENST00000343307:exon13:c.G1108A:p.E370K	Score=284;Name=lod=19	NA	13q12.3	NA	NA	NA	NA	rs1041073	0.69	0.69	0.659	0.666733	0.7575	0.7798	0.7579	0.3873	0.7699	0.76	0.77	0.79	0.39	0.7425	0.79	0.28	T	0.964	D	0.472	P	0.000	N	0.001	P	0.82	L	-1.92	D	-0.913	T	0.000	T	0.174	3.616	18.4	3.21	0.602	5.974	7.087	3.616191	3.616191	0.04	0.778023	0.416024	NA	0.507	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000082784.1;CLNDSDB=.;CLNDSDBID=.	11.5553104
499	1	879317	879317	C	T	exonic	SAMD11	NA	synonymous SNV	SAMD11:NM_152486:exon14:c.C1830T:p.Y610Y	exonic	ENSG00000187634	NA	synonymous SNV	ENSG00000187634:ENST00000342066:exon14:c.C1830T:p.Y610Y	Score=483;Name=lod=123	NA	1p36.33	NA	Name=Pol2(phosphoS2)	NA	NA	rs7523549	0.09	0.09	0.077	0.091254	0.0398	0.0665	0.0778	0.2156	0.0112	0.04	0.07	0.07	0.21	0.048	0.21	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.180	T	0.000	T	.	-0.42	2.042	5.43	2.567	3.429	15.438	-0.419809	NA	NA	0.027027	0.190282	ID=COSM1344678;OCCURENCE=2(large_intestine)	0.072	NA	11.5518396
499	9	2718717	2718717	C	T	exonic	KCNV2	NA	synonymous SNV	KCNV2:NM_133497:exon1:c.C978T:p.D326D	exonic	ENSG00000168263	NA	synonymous SNV	ENSG00000168263:ENST00000382082:exon1:c.C978T:p.D326D	Score=622;Name=lod=450	NA	9p24.2	Score=735;Name=V$MYOGNF1_01	NA	Name=4	NA	rs7860945	0.03	0.03	0.034	0.0333466	0.0417	NA	0.0331	0.0681	0.0123	0.04	NA	0.04	0.06	0.0351	0.065	0.15	T	.	.	.	.	.	.	1.000	D	.	.	.	.	-1.070	T	0.027	T	.	0.348	5.887	3.39	0.600	0.343	9.714	0.347725	NA	0.01	0.04445	0.065138	NA	0.022	NA	11.5454166
500	11	1651555	1651555	C	A	exonic	KRTAP5-5	NA	nonsynonymous SNV	KRTAP5-5:NM_001001480:exon1:c.C485A:p.P162H	exonic	ENSG00000185940	NA	nonsynonymous SNV	ENSG00000185940:ENST00000399676:exon1:c.C485A:p.P162H	NA	NA	11p15.5	NA	NA	NA	NA	rs147101544	0.07	0.07	0.034	0.0748802	0.1054	0.003	0.0908	0.1399	0.0184	0.09	NA	0.08	0.09	0.0849	0.13	0	D	0.976	D	0.451	P	.	.	1.000	P	2.74	M	5.1	T	-0.986	T	0.000	T	0.094	-0.408	2.092	2.89	0.577	0.883	6.636	-0.408148	NA	0.01	0.099162	0.133515	NA	0.014	NA	11.5438714
500	9	140277826	140277826	C	T	exonic	EXD3	NA	nonsynonymous SNV	EXD3:NM_017820:exon3:c.G59A:p.R20Q	exonic	ENSG00000187609	NA	nonsynonymous SNV	ENSG00000187609:ENST00000340951:exon3:c.G59A:p.R20Q,ENSG00000187609:ENST00000460390:exon3:c.G59A:p.R20Q,ENSG00000187609:ENST00000479452:exon3:c.G59A:p.R20Q	Score=300;Name=lod=22	NA	9q34.3	NA	Name=Pol2(b),TAL1_(SC-12984),GATA-2,ZBTB7A_(SC-34508),CCNT2,GATA2_(CG2-96),GABP,HMGN3	Name=6	NA	rs13291830	0.55	0.55	NA	0.545327	0.6203	0.3849	0.4539	0.7776	0.3845	0.6	0.36	0.46	0.76	0.5744	0.77	0.57	T	0.003	B	0.001	B	0.004	N	0.000	P	-1.845	N	1.58	T	-1.004	T	0.000	T	0.022	1.996	12.63	-2.21	-1.248	-1.620	7.97	1.995825	1.995825	0.62	0.5979	0.772824	NA	0.652	NA	11.5407334
501	7	139026152	139026152	T	G	exonic	C7orf55,C7orf55-LUC7L2	NA	nonsynonymous SNV	C7orf55-LUC7L2:NM_001244584:exon1:c.T22G:p.S8A,C7orf55:NM_197964:exon1:c.T22G:p.S8A	exonic	ENSG00000164898,ENSG00000269955	NA	nonsynonymous SNV	ENSG00000164898:ENST00000297534:exon1:c.T22G:p.S8A,ENSG00000269955:ENST00000541515:exon1:c.T22G:p.S8A	Score=385;Name=lod=49	NA	7q34	NA	Name=BRCA1_(C-1863),YY1_(C-20),Pol2,SP1,Pol2(phosphoS2),HMGN3,TAF1,p300_(F-4),GTF2F1_(RAP-74),CHD2_(N-1250),CTCF,eGFP-HDAC8,Max,HA-E2F1,ZNF263,Pol2-4H8,CTCF_(SC-5916),YY1,FOXA1_(C-20),Pol2(b),IRF1,GTF2B,PAX5-C20,SIX5,c-Myc,AP-2gamma,NFKB,HEY1	Name=148	NA	rs10265	0.4	0.4	0.434	0.417133	0.2763	0.2024	0.2709	0.879	0.2628	0.27	0.22	0.3	0.87	0.2805	0.87	0.63	T	0.0	B	0.0	B	0.588	N	1.000	P	-0.205	N	1.63	T	-0.999	T	0.000	T	0.036	1.223	9.961	2.58	0.103	1.201	9.300	1.222766	NA	0.78	0.245581	0.781661	ID=COSM1600101;OCCURENCE=1(central_nervous_system)	0.471	NA	11.5309524
501	22	41790179	41790179	G	A	exonic	TEF	NA	synonymous SNV	TEF:NM_001145398:exon3:c.G465A:p.P155P,TEF:NM_003216:exon3:c.G555A:p.P185P	exonic	ENSG00000167074	NA	synonymous SNV	ENSG00000167074:ENST00000266304:exon3:c.G555A:p.P185P,ENSG00000167074:ENST00000406644:exon3:c.G465A:p.P155P	NA	NA	22q13.2	Score=824;Name=V$HNF4_01	NA	NA	NA	rs17365991	0.03	0.03	0.019	0.0179712	0.0507	0.003	0.0288	0.003	0.0123	0.06	0.01	0.03	0.0041	0.0366	0.06	.	.	.	.	.	.	.	.	1.000	D	.	.	.	.	-0.993	T	0.013	T	.	1.024	9.184	-6.36	-1.214	-2.554	1.456	1.02433	NA	NA	0.051977	0.009986	NA	0.029	NA	11.5273896
502	17	8243598	8243598	C	T	exonic	ODF4	NA	nonsynonymous SNV	ODF4:NM_153007:exon1:c.C229T:p.R77C	exonic	ENSG00000184650	NA	nonsynonymous SNV	ENSG00000184650:ENST00000328248:exon1:c.C229T:p.R77C	NA	NA	17p13.1	Score=772;Name=V$YY1_02	NA	NA	NA	rs73250854	0.1	0.1	0.106	0.0982428	0.1024	0.0139	0.098	0.1694	0.0849	0.1	0.02	0.1	0.17	0.1018	0.17	0	D	0.997	D	0.833	P	0.573	N	1.000	P	1.32	L	0.99	T	-1.082	T	0.001	T	0.158	1.916	12.36	2.84	0.615	0.702	5.650	1.916018	1.916018	NA	0.111744	0.142306	NA	0.159	NA	11.5173894
503	4	187209729	187209729	G	A	exonic	F11	NA	synonymous SNV	F11:NM_000128:exon15:c.G1839A:p.E613E	exonic	ENSG00000088926	NA	synonymous SNV	ENSG00000088926:ENST00000264692:exon15:c.G1683A:p.E561E,ENSG00000088926:ENST00000403665:exon15:c.G1839A:p.E613E	Score=259;Name=lod=15	NA	4q35.2	Score=833;Name=V$HMX1_01	NA	NA	NA	rs5976	0.06	0.06	0.061	0.0583067	0.0537	0.0843	0.0605	0.0303	0.0726	0.06	0.09	0.05	0.04	0.0546	0.098	.	.	.	.	.	.	.	.	1.000	D	.	.	.	.	-1.094	T	0.011	T	.	2.784	15.27	4.65	1.463	0.191	6.403	2.784293	2.784293	NA	0.046163	0.047435	ID=COSM149776;OCCURENCE=1(stomach)	0.065	NA	11.5122036
503	7	44800176	44800176	G	T	exonic	ZMIZ2	NA	nonsynonymous SNV	ZMIZ2:NM_174929:exon7:c.G1146T:p.L382F,ZMIZ2:NM_031449:exon9:c.G1224T:p.L408F	exonic	ENSG00000122515	NA	nonsynonymous SNV	ENSG00000122515:ENST00000265346:exon7:c.G1146T:p.L382F,ENSG00000122515:ENST00000413916:exon8:c.G1050T:p.L350F,ENSG00000122515:ENST00000433667:exon8:c.G1128T:p.L376F,ENSG00000122515:ENST00000441627:exon8:c.G1224T:p.L408F,ENSG00000122515:ENST00000309315:exon9:c.G1224T:p.L408F	Score=462;Name=lod=101	NA	7p13	NA	NA	NA	NA	rs3735478	0.18	0.18	0.152	0.15016	0.3042	0.1429	0.1873	0.0136	0.1575	0.32	0.13	0.18	0.0041	0.2418	0.32	0.35	T	1.0	D	0.991	D	0.000	D	0.001	P	1.61	L	0.68	T	-1.031	T	0.000	T	0.209	3.227	16.81	2.59	0.705	0.844	8.409	3.226875	3.226875	0.03	0.27583	0.05495	NA	0.152	NA	11.5115034
503	4	74451073	74451073	A	G	exonic	RASSF6	NA	nonsynonymous SNV	RASSF6:NM_001270392:exon5:c.T355C:p.S119P,RASSF6:NM_001270391:exon6:c.T391C:p.S131P,RASSF6:NM_177532:exon6:c.T391C:p.S131P,RASSF6:NM_201431:exon6:c.T487C:p.S163P	exonic	ENSG00000169435	NA	nonsynonymous SNV	ENSG00000169435:ENST00000335049:exon5:c.T355C:p.S119P,ENSG00000169435:ENST00000307439:exon6:c.T391C:p.S131P,ENSG00000169435:ENST00000342081:exon6:c.T487C:p.S163P,ENSG00000169435:ENST00000395777:exon6:c.T391C:p.S131P	Score=441;Name=lod=83	NA	4q13.3	Score=876;Name=V$GATA1_04	NA	NA	NA	rs12507775	0.25	0.25	0.231	0.263379	0.2833	0.1141	0.4712	0.2761	0.2321	0.28	0.11	0.41	0.25	0.2641	0.41	0.22	T	0.034	B	0.038	B	0.022	N	0.415	P	0.95	L	1.14	T	-0.937	T	0.000	T	0.114	0.981	9.003	4.74	2.254	1.490	4.841	0.98056	NA	0.27	0.276111	0.296641	NA	0.348	NA	11.5098224
503	13	47354101	47354101	C	T	exonic	ESD	NA	nonsynonymous SNV	ESD:NM_001984:exon8:c.G569A:p.G190E	exonic	ENSG00000139684	NA	nonsynonymous SNV	ENSG00000139684:ENST00000378720:exon8:c.G569A:p.G190E,ENSG00000139684:ENST00000378697:exon9:c.G482A:p.G161E	Score=533;Name=lod=195	NA	13q14.2	NA	NA	NA	NA	rs9778	0.17	0.17	0.167	0.192093	0.0775	0.4206	0.1383	0.0855	0.2566	0.06	0.4	0.15	0.1	0.1398	0.4	0.11	T	0.685	P	0.301	B	0.000	N	0.000	P	2.595	M	1.49	T	-0.961	T	0.000	T	0.397	4.072	20.9	4.42	0.912	4.842	10.904	4.07188	4.07188	0.02	0.106279	0.079437	NA	0.254	NA	11.5097544
504	5	121488506	121488506	C	G	exonic	ZNF474	NA	nonsynonymous SNV	ZNF474:NM_207317:exon2:c.C821G:p.S274C	exonic	ENSG00000164185	NA	nonsynonymous SNV	ENSG00000164185:ENST00000296600:exon2:c.C821G:p.S274C	NA	NA	5q23.2	NA	Name=ERalpha_a,GR	Name=22	NA	rs35262183	0.27	0.27	0.23	0.249401	0.2724	0.3909	0.2406	0.09	0.3016	0.27	0.41	0.3	0.09	0.2858	0.41	0.11	T	0.985	D	0.408	B	0.537	U	1.000	P	1.95	M	0.78	T	-0.957	T	0.000	T	0.06	0.247	5.333	2.52	0.216	0.799	7.621	0.24683	NA	0.05	0.28186	0.116205	NA	0.159	NA	11.4932734
504	6	52701143	52701143	C	T	exonic	GSTA5	NA	nonsynonymous SNV	GSTA5:NM_153699:exon4:c.G163A:p.V55I	exonic	ENSG00000182793	NA	nonsynonymous SNV	ENSG00000182793:ENST00000284562:exon4:c.G163A:p.V55I,ENSG00000182793:ENST00000370989:exon4:c.G163A:p.V55I	Score=614;Name=lod=417	NA	6p12.2	NA	NA	NA	NA	rs2397118	0.91	0.91	0.909	0.888578	0.9473	0.8681	0.9654	0.854	0.8415	0.94	0.87	0.97	0.87	0.9306	0.97	0.04	D	0.32	B	0.295	B	0.000	D	0.039	P	2.485	M	2.94	T	-1.125	T	0.024	T	0.045	2.89	15.63	2.63	1.456	4.168	10.674	2.890114	2.890114	0.02	0.96407	0.866546	NA	0.913	NA	11.4913634
504	6	31324036	31324036	T	A	exonic	HLA-B	NA	nonsynonymous SNV	HLA-B:NM_005514:exon3:c.A527T:p.E176V	exonic	ENSG00000234745	NA	nonsynonymous SNV	ENSG00000234745:ENST00000434333:exon2:c.A560T:p.E187V,ENSG00000234745:ENST00000412585:exon3:c.A527T:p.E176V	NA	NA	6p21.33	NA	Name=Pol2-4H8	Name=6	NA	rs151341293	0.41	0.41	0.344	0.425519	0.4294	0.3839	0.4553	0.4304	0.4366	0.4	0.41	0.44	0.41	0.4164	0.44	1	T	0.001	B	0.01	B	0.000	U	1.000	P	-0.175	N	9.57	T	-0.860	T	0.000	T	0.542	-1.683	0.012	-6.36	-6.376	-7.607	1.663	-1.683326	NA	1	NA	NA	NA	0.333	NA	11.4875334
504	3	16254172	16254172	G	A	exonic	GALNT15	NA	nonsynonymous SNV	GALNT15:NM_054110:exon6:c.G1294A:p.A432T	exonic	ENSG00000131386	NA	nonsynonymous SNV	ENSG00000131386:ENST00000339732:exon6:c.G1294A:p.A432T,ENSG00000131386:ENST00000437509:exon6:c.G1294A:p.A432T	Score=300;Name=lod=22	NA	3p25.1	NA	NA	NA	NA	rs17851238	0.15	0.15	0.139	0.153355	0.1133	0.002	0.1599	0.3396	0.0941	0.12	0.0017	0.15	0.35	0.117	0.35	0.21	T	0.651	P	0.154	B	0.935	N	0.730	P	0.745	N	0.28	T	-1.021	T	0.000	T	0.29	1.839	12.11	4.47	2.524	2.581	15.503	1.838866	1.838866	0.35	0.117558	0.288697	ID=COSM1420344;OCCURENCE=1(large_intestine)	0.21	NA	11.4854754
505	15	40564576	40564576	C	T	exonic	PAK6	NA	nonsynonymous SNV	PAK6:NM_001276717:exon4:c.C1010T:p.P337L,PAK6:NM_001128629:exon5:c.C1010T:p.P337L,PAK6:NM_001128628:exon6:c.C1010T:p.P337L,PAK6:NM_001276718:exon6:c.C1010T:p.P337L,PAK6:NM_020168:exon6:c.C1010T:p.P337L	exonic	ENSG00000137843	NA	nonsynonymous SNV	ENSG00000137843:ENST00000542403:exon4:c.C1010T:p.P337L,ENSG00000137843:ENST00000453867:exon5:c.C1010T:p.P337L,ENSG00000137843:ENST00000260404:exon6:c.C1010T:p.P337L,ENSG00000137843:ENST00000441369:exon6:c.C1010T:p.P337L,ENSG00000137843:ENST00000455577:exon6:c.C1010T:p.P337L,ENSG00000137843:ENST00000560346:exon6:c.C1010T:p.P337L	Score=251;Name=lod=14	NA	15q15.1	NA	NA	NA	NA	rs3743137	0.11	0.11	0.086	0.0940495	0.1252	0.119	0.0663	0.0348	0.136	0.14	0.12	0.09	0.07	0.1138	0.14	0.35	T	0.695	P	0.155	B	0.016	N	0.000	P	0.805	L	-0.92	T	-1.027	T	0.003	T	0.395	1.408	10.65	3.04	0.996	2.667	13.280	1.408476	1.408476	0.09	0.111628	0.046754	NA	0.094	NA	11.4827054
505	9	96080699	96080699	C	T	exonic	C9orf129	NA	nonsynonymous SNV	C9orf129:NM_001098808:exon5:c.G572A:p.R191H	exonic	ENSG00000204352	NA	nonsynonymous SNV	ENSG00000204352:ENST00000375419:exon5:c.G572A:p.R191H	NA	NA	9q22.31	NA	NA	NA	NA	rs36081907	0.11	0.11	0.113	0.0986422	0.1402	0.001	0.0937	0.1762	0.0552	0.14	0.0017	0.11	0.18	0.1019	0.18	0	D	0.931	P	0.099	B	.	.	1.000	P	0	N	0.62	T	-1.051	T	0.000	T	0.032	2.091	12.95	-3.08	-0.978	-1.366	3.485	2.091402	2.091402	0	0.110407	0.151804	NA	0.101	NA	11.4808264
505	8	67592152	67592152	T	C	exonic	C8orf44	NA	nonsynonymous SNV	C8orf44:NM_019607:exon3:c.T443C:p.F148S	exonic	ENSG00000213865	NA	nonsynonymous SNV	ENSG00000213865:ENST00000519561:exon3:c.T443C:p.F148S,ENSG00000213865:ENST00000390159:exon4:c.T443C:p.F148S	NA	NA	8q13.1	NA	Name=CEBPB,eGFP-FOS,MafK_(ab50322),c-Fos,c-Jun,JunD,eGFP-JunB	Name=111	NA	rs1057463	0.21	0.21	0.189	0.21845	0.2922	0.2401	0.2291	0.0514	0.3384	0.3	0.23	0.23	0.05	0.2655	0.3	0.48	T	0.713	P	0.522	P	.	.	1.000	P	0	N	1.12	T	-0.998	T	0.000	T	0.27	2.602	14.66	2.84	0.893	1.327	6.239	2.60237	2.60237	0.43	0.294884	0.091466	NA	0.297	NA	11.4807494
505	5	148206473	148206473	G	C	exonic	ADRB2	NA	nonsynonymous SNV	ADRB2:NM_000024:exon1:c.G79C:p.E27Q	exonic	ENSG00000169252	NA	nonsynonymous SNV	ENSG00000169252:ENST00000305988:exon1:c.G79C:p.E27Q	NA	NA	5q32	Score=791;Name=V$PAX2_01	NA	Name=10	NA	rs1042714	0.76	0.76	0.749	0.795727	0.5905	0.9266	0.7579	0.8638	0.8067	0.59	0.93	0.73	0.84	0.6834	0.93	0.45	T	0.009	B	0.009	B	0.133	N	1.000	P	0.345	N	1.19	T	-1.012	T	0.000	T	0.194	-0.276	2.677	4.04	1.387	1.400	11.190	-0.276314	NA	0.47	0.579884	0.816387	NA	0.565	CLINSIG=other|other|other;CLNDBN=Asthma\x2c_childhood\x2c_susceptibility_to|Metabolic_syndrome\x2c_susceptibility_to|Obesity;CLNREVSTAT=single|single|single;CLNACC=RCV000019318.1|RCV000019319.1|RCV000033191.1;CLNDSDB=.|.|MedGen:OMIM:Orphanet:SNOMED_CT;CLNDSDBID=.|.|C0028754:601665:ORPHA71529:414916001	11.4795494
506	6	2955802	2955802	T	C	exonic	SERPINB6	NA	nonsynonymous SNV	SERPINB6:NM_001271822:exon3:c.A310G:p.M104V,SERPINB6:NM_001271823:exon3:c.A325G:p.M109V,SERPINB6:NM_001271824:exon3:c.A268G:p.M90V,SERPINB6:NM_001271825:exon3:c.A268G:p.M90V,SERPINB6:NM_004568:exon3:c.A268G:p.M90V,SERPINB6:NM_001195291:exon4:c.A280G:p.M94V	exonic	ENSG00000124570	NA	nonsynonymous SNV	ENSG00000124570:ENST00000380520:exon2:c.A268G:p.M90V,ENSG00000124570:ENST00000335686:exon3:c.A268G:p.M90V,ENSG00000124570:ENST00000380524:exon3:c.A268G:p.M90V,ENSG00000124570:ENST00000380529:exon3:c.A268G:p.M90V,ENSG00000124570:ENST00000380539:exon3:c.A268G:p.M90V,ENSG00000124570:ENST00000380546:exon3:c.A268G:p.M90V	NA	NA	6p25.2	NA	NA	NA	NA	rs2295769	0.24	0.24	0.224	0.212859	0.2992	0.2728	0.2464	0.0295	0.2863	0.32	0.31	0.24	0.03	0.2645	0.32	1	T	0.0	B	0.004	B	0.040	N	1.000	P	-0.165	N	-1.79	D	-1.064	T	0.103	T	0.263	-0.603	1.306	3.8	0.984	2.224	9.206	-0.6034	NA	0.39	0.299302	0.066046	NA	0.239	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000037108.1;CLNDSDB=.;CLNDSDBID=.	11.4703314
506	6	46672943	46672943	A	G	exonic	PLA2G7	NA	nonsynonymous SNV	PLA2G7:NM_001168357:exon11:c.T1136C:p.V379A,PLA2G7:NM_005084:exon11:c.T1136C:p.V379A	exonic	ENSG00000146070	NA	nonsynonymous SNV	ENSG00000146070:ENST00000274793:exon11:c.T1136C:p.V379A,ENSG00000146070:ENST00000537365:exon11:c.T1136C:p.V379A	NA	NA	6p12.3	NA	NA	NA	NA	rs1051931	0.79	0.79	0.773	0.810304	0.7565	0.9087	0.8458	0.7239	0.8558	0.76	0.9	0.85	0.68	0.8033	0.9	0.73	T	0.99	D	0.814	P	0.029	N	0.000	P	2.015	M	0.63	T	-0.909	T	0.123	T	0.662	2.924	15.75	5.87	2.247	6.861	11.874	2.924347	2.924347	0.2	0.803953	0.747617	NA	0.804	CLINSIG=other|untested;CLNDBN=Asthma_and_atopy\x2c_susceptibility_to|not_provided;CLNREVSTAT=single|not;CLNACC=RCV000008378.1|RCV000049574.1;CLNDSDB=.|.;CLNDSDBID=.|.	11.4695804
506	3	172835290	172835290	C	T	exonic	SPATA16	NA	nonsynonymous SNV	SPATA16:NM_031955:exon2:c.G232A:p.E78K	exonic	ENSG00000144962	NA	nonsynonymous SNV	ENSG00000144962:ENST00000351008:exon2:c.G232A:p.E78K	Score=448;Name=lod=88	NA	3q26.31	NA	NA	NA	NA	rs1515441	0.17	0.17	0.149	0.170727	0.0994	0.3095	0.183	0.0968	0.1922	0.09	0.35	0.16	0.09	0.1434	0.35	0.07	T	0.634	P	0.167	B	0.043	N	0.994	P	0.695	N	2.2	T	-0.910	T	0.000	T	0.107	2.705	15.01	4.4	1.227	1.559	14.126	2.705345	2.705345	0.08	0.122558	0.103041	NA	0.152	NA	11.4679754
506	16	84228770	84228770	G	C	exonic	ADAD2	NA	nonsynonymous SNV	ADAD2:NM_001145400:exon4:c.G703C:p.G235R,ADAD2:NM_139174:exon5:c.G919C:p.G307R	exonic	ENSG00000140955	NA	nonsynonymous SNV	ENSG00000140955:ENST00000315906:exon4:c.G703C:p.G235R,ENSG00000140955:ENST00000268624:exon5:c.G919C:p.G307R	Score=381;Name=lod=47	NA	16q24.1	Score=899;Name=V$NCX_01	NA	NA	NA	rs11149631	0.3	0.3	0.285	0.276158	0.3101	0.1964	0.2363	0.4463	0.1217	0.31	0.18	0.26	0.47	0.2603	0.47	0.21	T	0.424	B	0.256	B	0.012	N	0.687	P	1.095	L	2.3	T	-0.893	T	0.000	T	0.24	1.544	11.12	2.82	2.419	1.829	5.638	1.544385	1.544385	0.12	0.295835	0.421364	NA	0.362	NA	11.4670984
506	8	118184783	118184783	C	T	exonic	SLC30A8	NA	nonsynonymous SNV	SLC30A8:NM_173851:exon8:c.C973T:p.R325W,SLC30A8:NM_001172814:exon9:c.C826T:p.R276W,SLC30A8:NM_001172811:exon10:c.C826T:p.R276W,SLC30A8:NM_001172813:exon11:c.C826T:p.R276W,SLC30A8:NM_001172815:exon11:c.C826T:p.R276W	exonic	ENSG00000164756	NA	nonsynonymous SNV	ENSG00000164756:ENST00000456015:exon8:c.C973T:p.R325W,ENSG00000164756:ENST00000519688:exon9:c.C826T:p.R276W,ENSG00000164756:ENST00000521243:exon10:c.C826T:p.R276W,ENSG00000164756:ENST00000427715:exon11:c.C826T:p.R276W	NA	Name=Type 2 diabetes,Type 2 diabetes and other traits,Glycated hemoglobin levels	8q24.11	NA	Name=CTCF,GATA2_(CG2-96),CCNT2,KAP1,GATA-2,TAL1_(SC-12984)	Name=23	NA	rs13266634	0.28	0.28	0.26	0.255192	0.2833	0.4573	0.2666	0.0741	0.2546	0.29	0.46	0.26	0.08	0.2849	0.46	0.03	D	0.002	B	0.001	B	0.734	N	1.000	P	1.585	L	-0.14	T	-0.942	T	0.000	T	0.139	1.783	11.92	-1.75	-0.224	-0.403	0.873	1.783088	1.783088	0.04	0.29814	0.096686	NA	0.152	CLINSIG=other;CLNDBN=DIABETES_MELLITUS\x2c_TYPE_2\x2c_SUSCEPTIBILITY_TO;CLNREVSTAT=single;CLNACC=RCV000001055.2;CLNDSDB=.;CLNDSDBID=.	11.4669934
507	6	47649694	47649694	A	G	exonic	GPR111	NA	nonsynonymous SNV	GPR111:NM_153839:exon7:c.A1195G:p.I399V	exonic	ENSG00000164393	NA	nonsynonymous SNV	ENSG00000164393:ENST00000398742:exon5:c.A1195G:p.I399V,ENSG00000164393:ENST00000296862:exon6:c.A1399G:p.I467V,ENSG00000164393:ENST00000507065:exon6:c.A1195G:p.I399V,ENSG00000164393:ENST00000467205:exon7:c.A1195G:p.I399V	Score=451;Name=lod=91	NA	6p12.3	NA	NA	NA	NA	rs9381594	0.48	0.48	0.475	0.520966	0.6272	0.3085	0.4352	0.4758	0.7526	0.62	0.3	0.49	0.49	0.5954	0.65	0.66	T	0.937	P	0.605	P	0.000	D	0.217	P	1.86	L	0.69	T	-0.999	T	0.095	T	0.293	2.65	14.82	5.39	2.040	6.083	14.577	2.649573	2.649573	0.2	0.647433	0.48443	NA	0.435	NA	11.4633004
507	4	79385632	79385632	C	T	exonic	FRAS1	NA	synonymous SNV	FRAS1:NM_025074:exon49:c.C6924T:p.V2308V	exonic	ENSG00000138759	NA	synonymous SNV	ENSG00000138759:ENST00000264895:exon49:c.C6924T:p.V2308V	Score=440;Name=lod=82	NA	4q21.21	NA	NA	Name=8	NA	rs13123710	0.03	0.03	0.041	0.024361	0.0646	0.001	0.036	0.0061	0.0235	0.07	NA	0.04	0.01	0.0583	0.081	.	.	.	.	.	.	.	.	1.000	D	.	.	.	.	.	.	.	.	.	-0.683	1.028	3.77	0.702	2.680	11.660	-0.682839	NA	NA	0.080603	0.016715	NA	0.051	NA	11.4631636
507	21	47423389	47423389	G	A	exonic	COL6A1	NA	nonsynonymous SNV	COL6A1:NM_001848:exon35:c.G2549A:p.R850H	exonic	ENSG00000142156	NA	nonsynonymous SNV	ENSG00000142156:ENST00000361866:exon35:c.G2549A:p.R850H	Score=524;Name=lod=179	NA	21q22.3	Score=835;Name=V$CEBP_C	NA	Name=9	NA	rs1053312	0.28	0.28	0.269	0.270168	0.2724	0.1339	0.281	0.4198	0.1984	0.27	0.15	0.3	0.42	0.2888	0.42	0.15	T	0.002	B	0.002	B	0.489	N	0.996	P	0.345	N	-1.75	D	-1.025	T	0.000	T	0.056	3.756	19.07	0.709	0.063	-0.001	3.456	3.755932	3.755932	0.15	0.30935	0.398488	NA	0.384	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000079798.2;CLNDSDB=.;CLNDSDBID=.	11.4627834
507	20	17950545	17950545	A	T	exonic	MGME1	NA	nonsynonymous SNV	MGME1:NM_052865:exon2:c.A43T:p.S15C	exonic	ENSG00000125871	NA	nonsynonymous SNV	ENSG00000125871:ENST00000377704:exon2:c.A43T:p.S15C,ENSG00000125871:ENST00000377709:exon2:c.A43T:p.S15C,ENSG00000125871:ENST00000377710:exon2:c.A43T:p.S15C	NA	NA	20p11.23	NA	Name=c-Myc,USF-1,TBP,Pol2(b),Sin3Ak-20,c-Fos,Max,ELF1_(SC-631),HNF4G_(SC-6558),USF2,Pol2,PU.1,USF1_(SC-8983)	Name=124	NA	rs11551768	0.08	0.08	0.065	0.0852636	0.1362	0.0288	0.1066	0.0582	0.1125	0.12	0.03	0.12	0.05	0.1041	0.13	0.03	D	0.985	D	0.527	P	0.025	N	1.000	N	1.39	L	0.79	T	-1.026	T	0.002	T	0.123	1.545	11.12	-0.887	-0.475	0.776	9.91	1.544737	1.544737	0.03	0.131279	0.071039	NA	0.174	NA	11.4617544
507	6	31239430	31239430	C	T	exonic	HLA-C	NA	nonsynonymous SNV	HLA-C:NM_001243042:exon2:c.G289A:p.A97T,HLA-C:NM_002117:exon2:c.G289A:p.A97T	exonic	ENSG00000204525	NA	nonsynonymous SNV	ENSG00000204525:ENST00000376228:exon2:c.G289A:p.A97T,ENSG00000204525:ENST00000376237:exon2:c.G289A:p.A97T,ENSG00000204525:ENST00000383329:exon2:c.G289A:p.A97T	NA	NA	6p21.33	NA	Name=Pol2,RFX5_(N-494),Pol2-4H8,NFKB,CTCF	Name=31	NA	rs41543814	0.48	0.48	0.429	0.462061	0.4404	0.6567	0.5202	0.3797	0.3538	0.43	0.65	0.51	0.37	0.4329	0.65	1	T	0.002	B	0.008	B	0.005	N	1.000	P	.	.	9.54	T	-0.994	T	0.014	T	0.52	0.631	7.393	-5.5	-1.130	-6.348	0.960	0.631156	NA	1	NA	NA	ID=COSM329393,COSM329394;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.254	NA	11.4600334
507	20	20493222	20493222	G	A	exonic	RALGAPA2	NA	synonymous SNV	RALGAPA2:NM_020343:exon32:c.C4791T:p.P1597P	exonic	ENSG00000188559	NA	synonymous SNV	ENSG00000188559:ENST00000417022:exon1:c.C81T:p.P27P,ENSG00000188559:ENST00000202677:exon32:c.C4791T:p.P1597P	Score=371;Name=lod=43	NA	20p11.23	Score=987;Name=V$AP2ALPHA_01	NA	NA	NA	rs35039408	0.28	0.28	0.227	0.270567	0.4195	0.2163	0.4395	0.0295	0.3793	0.41	0.21	0.42	0.04	0.3774	0.42	0.03	D	.	.	.	.	0.000	D	0.000	P	.	.	-3.37	D	-1.119	T	0.000	T	.	0.835	8.371	-1.68	-0.136	-1.513	5.947	0.835272	NA	NA	0.414133	0.09127	ID=COSM1130680,COSM149149;OCCURENCE=1(stomach),1(prostate)	0.268	NA	11.4556336
508	2	219602499	219602499	G	C	exonic	TTLL4	NA	nonsynonymous SNV	TTLL4:NM_014640:exon3:c.G100C:p.E34Q	exonic	ENSG00000135912	NA	nonsynonymous SNV	ENSG00000135912:ENST00000258398:exon1:c.G100C:p.E34Q,ENSG00000135912:ENST00000437755:exon2:c.G100C:p.E34Q,ENSG00000135912:ENST00000392102:exon3:c.G100C:p.E34Q,ENSG00000135912:ENST00000442769:exon3:c.G100C:p.E34Q,ENSG00000135912:ENST00000415717:exon4:c.G100C:p.E34Q,ENSG00000135912:ENST00000424644:exon4:c.G100C:p.E34Q	Score=329;Name=lod=29	NA	2q35	NA	NA	NA	NA	rs3731877	0.42	0.42	0.436	0.403355	0.4662	0.1409	0.4222	0.6006	0.3292	0.46	0.16	0.42	0.64	0.4387	0.64	0.02	D	0.59	P	0.159	B	0.001	N	0.000	P	1.04	L	1.75	T	-1.003	T	0.000	T	0.194	2.755	15.17	5.53	2.601	3.127	13.995	2.754812	2.754812	0	0.474651	0.585111	ID=COSM1600350;OCCURENCE=1(central_nervous_system)	0.522	NA	11.4537824
508	19	20229486	20229486	G	A	exonic	ZNF90	NA	nonsynonymous SNV	ZNF90:NM_007138:exon4:c.G1123A:p.G375S	exonic	ENSG00000213988	NA	nonsynonymous SNV	ENSG00000213988:ENST00000418063:exon4:c.G1123A:p.G375S	Score=329;Name=lod=29	NA	19p12	NA	Name=KAP1,ZNF274	NA	NA	rs1725935	0.24	0.24	0.233	0.229034	0.1103	0.495	0.2205	0.1316	0.2147	0.12	0.55	0.19	0.12	0.1746	0.55	.	.	0.994	D	0.768	P	.	.	0.778	P	0.63	N	3.21	T	-0.931	T	0.000	T	0.027	2.955	15.85	-1.68	0.293	4.888	6.538	2.955039	2.955039	0.03	0.100566	0.138006	NA	0.174	NA	11.4478674
509	2	165551201	165551201	T	C	exonic	COBLL1	NA	nonsynonymous SNV	COBLL1:NM_014900:exon12:c.A2815G:p.N939D	exonic	ENSG00000082438	NA	nonsynonymous SNV	ENSG00000082438:ENST00000375458:exon11:c.A2701G:p.N901D,ENSG00000082438:ENST00000342193:exon12:c.A2815G:p.N939D,ENSG00000082438:ENST00000409184:exon12:c.A2815G:p.N939D,ENSG00000082438:ENST00000392717:exon13:c.A2929G:p.N977D,ENSG00000082438:ENST00000194871:exon15:c.A3016G:p.N1006D	NA	Name=Fasting insulin-related traits (interaction with BMI)	2q24.3	NA	Name=c-Jun	Name=6	NA	rs7607980	0.11	0.11	0.123	0.107428	0.1541	0.001	0.0821	0.1861	0.0808	0.15	NA	0.09	0.21	0.1103	0.21	0.61	T	0.804	P	0.311	B	0.442	N	1.000	P	0.695	N	.	.	-1.012	T	0.000	T	0.056	0.327	5.776	-2.65	-0.224	0.534	6.031	0.327468	NA	0.22	0.124884	0.155924	NA	0.138	NA	11.4440494
509	7	141784326	141784326	G	C	intronic	MGAM	NA	NA	NA	exonic	ENSG00000257335	NA	nonsynonymous SNV	ENSG00000257335:ENST00000475668:exon54:c.G6389C:p.G2130A	Score=539;Name=lod=207	NA	7q34	Score=949;Name=V$PBX1_01	NA	NA	NA	rs10952514	0.27	0.27	0.214	0.2498	0.3777	0.2917	0.2291	0.1112	0.2771	0.36	0.29	0.29	0.09	0.345	0.36	0	D	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.061	T	0.000	T	0.444	3.2	16.71	4.31	1.341	7.557	12.911	3.199726	3.199726	NA	NA	NA	NA	0.29	NA	11.4439667
509	6	31324024	31324024	C	A	exonic	HLA-B	NA	nonsynonymous SNV	HLA-B:NM_005514:exon3:c.G539T:p.R180L	exonic	ENSG00000234745	NA	nonsynonymous SNV	ENSG00000234745:ENST00000434333:exon2:c.G572T:p.R191L,ENSG00000234745:ENST00000412585:exon3:c.G539T:p.R180L	NA	NA	6p21.33	NA	Name=Pol2-4H8	Name=6	NA	rs697742	0.48	0.48	0.432	0.4998	0.3877	0.5655	0.4813	0.4894	0.5746	0.4	0.58	0.49	0.49	0.5026	0.58	0.91	T	0.001	B	0.018	B	0.104	N	1.000	P	.	.	9.53	T	-0.941	T	0.000	T	0.561	0.874	8.545	-4.74	-1.333	-2.272	3.974	0.874227	NA	0.82	NA	NA	NA	0.333	NA	11.4430334
509	11	34916657	34916657	C	T	exonic	APIP	NA	nonsynonymous SNV	APIP:NM_015957:exon2:c.G58A:p.D20N	exonic	ENSG00000149089	NA	nonsynonymous SNV	ENSG00000149089:ENST00000395787:exon2:c.G58A:p.D20N,ENSG00000149089:ENST00000278359:exon3:c.G109A:p.D37N	Score=525;Name=lod=182	NA	11p13	NA	NA	NA	NA	rs61734605	0.15	0.15	0.148	0.114617	0.328	NA	0.1643	0.0204	0.1053	0.34	NA	0.17	0.02	0.2333	0.34	0.16	T	0.338	B	0.093	B	0.000	D	0.000	P	1.14	L	1.82	T	-0.937	T	0.000	T	0.034	3.668	18.64	5.17	2.417	6.770	18.655	3.668045	3.668045	0.08	0.334691	0.083106	NA	0.123	NA	11.4373424
509	1	24421950	24421950	C	G	exonic	MYOM3	NA	nonsynonymous SNV	MYOM3:NM_152372:exon8:c.G772C:p.D258H	exonic	ENSG00000142661	NA	nonsynonymous SNV	ENSG00000142661:ENST00000329601:exon8:c.G772C:p.D258H,ENSG00000142661:ENST00000330966:exon8:c.G775C:p.D259H,ENSG00000142661:ENST00000374434:exon8:c.G772C:p.D258H	Score=521;Name=lod=174	NA	1p36.11	NA	NA	NA	NA	rs4319261	0.46	0.46	0.441	0.410543	0.497	0.377	0.3386	0.5416	0.2301	0.52	0.35	0.38	0.56	0.4249	0.56	0.36	T	0.999	D	0.869	P	0.005	N	0.000	P	0.585	N	0.39	T	-0.903	T	0.000	T	0.637	0.784	8.135	5.81	2.764	4.329	17.041	0.783923	NA	0.57	0.474496	0.498407	NA	0.297	NA	11.4369374
509	12	132688115	132688115	C	T	exonic	GALNT9	NA	nonsynonymous SNV	GALNT9:NM_021808:exon3:c.G100A:p.A34T,GALNT9:NM_001122636:exon7:c.G1198A:p.A400T	exonic	ENSG00000182870	NA	nonsynonymous SNV	ENSG00000182870:ENST00000541995:exon2:c.G100A:p.A34T,ENSG00000182870:ENST00000542942:exon2:c.G100A:p.A34T,ENSG00000182870:ENST00000397325:exon3:c.G100A:p.A34T,ENSG00000182870:ENST00000538356:exon3:c.G100A:p.A34T,ENSG00000182870:ENST00000535228:exon4:c.G451A:p.A151T,ENSG00000182870:ENST00000328957:exon7:c.G1198A:p.A400T	Score=259;Name=lod=15	NA	12q24.33	NA	NA	NA	NA	rs11246991	0.07	0.07	0.065	0.0517173	0.1491	NA	0.0965	0.0068	0.0337	0.14	NA	0.1	0.01	0.1071	0.14	0.11	T	0.996	D	0.778	P	0.000	N	0.000	P	0.105	N	1.3	T	-0.971	T	0.002	T	0.331	4.304	22.5	2.97	0.726	5.780	11.222	4.303589	4.303589	0.01	0.141854	0.029817	NA	0.043	NA	11.4352794
510	6	26184102	26184102	G	A	exonic	HIST1H2BE	NA	nonsynonymous SNV	HIST1H2BE:NM_003523:exon1:c.G79A:p.G27S	exonic	ENSG00000197697	NA	nonsynonymous SNV	ENSG00000197697:ENST00000356530:exon1:c.G79A:p.G27S	Score=619;Name=lod=436	NA	6p22.2	NA	Name=TBP,Oct-2,HEY1,Pol2-4H8,Pol2,NRSF,POU2F2,TAF1,GATA-1	NA	NA	rs7766641	0.36	0.36	0.295	0.352835	0.2833	0.7579	0.3732	0.0204	0.4417	0.29	0.77	0.33	0.03	0.334	0.77	0.11	T	.	.	.	.	0.004	U	0.078	P	.	.	1.95	T	-1.115	T	0.049	T	0.107	2.728	15.08	4.18	1.280	7.554	12.907	2.728194	2.728194	0.18	0.281163	0.065138	NA	0.21	NA	11.4348704
510	1	114438951	114438951	A	G	exonic	AP4B1	NA	nonsynonymous SNV	AP4B1:NM_001253852:exon8:c.T1439C:p.L480S,AP4B1:NM_001253853:exon9:c.T1142C:p.L381S,AP4B1:NM_006594:exon9:c.T1439C:p.L480S	exonic	ENSG00000134262	NA	nonsynonymous SNV	ENSG00000134262:ENST00000369567:exon5:c.T935C:p.L312S,ENSG00000134262:ENST00000369569:exon8:c.T1439C:p.L480S,ENSG00000134262:ENST00000256658:exon9:c.T1439C:p.L480S	Score=443;Name=lod=84	NA	1p13.2	NA	NA	Name=27	NA	rs1217401	0.35	0.35	0.371	0.376997	0.2694	0.0794	0.2536	0.8003	0.3098	0.28	0.09	0.28	0.79	0.3186	0.79	0.07	T	0.071	B	0.111	B	0.017	N	0.000	P	0.05	N	1.85	T	-1.051	T	0.024	T	0.298	2.81	15.36	6.04	2.317	6.230	16.588	2.810246	2.810246	0.13	0.311512	0.684748	NA	0.312	NA	11.4338214
510	5	180046344	180046344	G	C	exonic	FLT4	NA	nonsynonymous SNV	FLT4:NM_002020:exon19:c.C2670G:p.H890Q,FLT4:NM_182925:exon19:c.C2670G:p.H890Q	exonic	ENSG00000037280	NA	nonsynonymous SNV	ENSG00000037280:ENST00000261937:exon19:c.C2670G:p.H890Q,ENSG00000037280:ENST00000393347:exon19:c.C2670G:p.H890Q,ENSG00000037280:ENST00000502649:exon19:c.C2670G:p.H890Q	Score=520;Name=lod=173	NA	5q35.3	Score=728;Name=V$SEF1_C	Name=HA-E2F1,Pol2-4H8,ZNF263,CTCF_(SC-5916),Pol2,TAF1,CTCF	Name=24	NA	rs448012	0.53	0.53	0.587	0.582668	0.6531	0.497	0.7464	0.5144	0.5746	0.58	0.44	0.64	0.46	0.6247	0.64	0.29	T	0.18	B	0.285	B	.	.	0.000	P	-0.295	N	-1.54	D	-0.907	T	0.000	T	0.438	3.023	16.09	1.22	0.126	3.431	8.832	3.023122	3.023122	0.09	0.623371	0.545496	ID=COSM449470,COSM1486680;OCCURENCE=1(breast)	0.246	NA	11.4321624
511	4	2160894	2160894	C	T	exonic	POLN	NA	synonymous SNV	POLN:NM_181808:exon12:c.G1599A:p.L533L	exonic	ENSG00000130997	NA	synonymous SNV	ENSG00000130997:ENST00000382865:exon12:c.G1599A:p.L533L,ENSG00000130997:ENST00000511885:exon14:c.G1599A:p.L533L	Score=456;Name=lod=95	NA	4p16.3	Score=702;Name=V$LUN1_01	NA	NA	NA	rs10488836	0.2	0.2	0.177	0.201478	0.0706	0.3363	0.1686	0.2579	0.1442	0.07	0.33	0.17	0.25	0.1132	0.33	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	1.019	9.161	3.6	2.460	2.431	7.645	1.01861	NA	NA	0.060581	0.229687	NA	0.167	NA	11.4222856
511	1	91782011	91782011	G	A	exonic	HFM1	NA	synonymous SNV	HFM1:NM_001017975:exon26:c.C2835T:p.I945I	exonic	ENSG00000162669	NA	synonymous SNV	ENSG00000162669:ENST00000370424:exon22:c.C1872T:p.I624I,ENSG00000162669:ENST00000294696:exon26:c.C531T:p.I177I,ENSG00000162669:ENST00000370425:exon26:c.C2835T:p.I945I	Score=631;Name=lod=490	NA	1p22.2	Score=843;Name=V$BRN2_01	NA	NA	NA	rs74843031	0.11	0.11	0.106	0.105631	0.0746	0.1726	0.1167	0.1021	0.0654	0.09	0.14	0.15	0.1	0.095	0.15	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.767	T	0.191	T	.	0.829	8.343	4.16	1.103	4.416	15.326	0.829136	NA	NA	0.078205	0.106721	ID=COSM146558;OCCURENCE=1(stomach)	0.08	NA	11.4188616
512	5	122359640	122359640	T	C	exonic	PPIC	NA	nonsynonymous SNV	PPIC:NM_000943:exon5:c.A569G:p.N190S	exonic	ENSG00000168938	NA	nonsynonymous SNV	ENSG00000168938:ENST00000306442:exon5:c.A569G:p.N190S	Score=448;Name=lod=88	NA	5q23.2	NA	NA	NA	NA	rs451195	0.16	0.16	0.161	0.141174	0.339	0.0129	0.1902	0.0348	0.1789	0.33	0.01	0.2	0.03	0.2435	0.35	0.17	T	0.001	B	0.001	B	0.000	D	0.000	P	0.055	N	1.31	T	-0.965	T	0.000	T	0.006	3.016	16.06	4.74	1.035	4.760	13.205	3.01551	3.01551	0.15	0.346744	0.085792	NA	0.138	NA	11.4040894
512	3	14175262	14175262	T	C	exonic	TMEM43	NA	nonsynonymous SNV	TMEM43:NM_024334:exon7:c.T536C:p.M179T	exonic	ENSG00000170876	NA	nonsynonymous SNV	ENSG00000170876:ENST00000306077:exon7:c.T536C:p.M179T	Score=321;Name=lod=27	NA	3p25.1	NA	NA	NA	NA	rs2340917	0.46	0.46	0.405	0.463259	0.2624	0.6756	0.5058	0.4508	0.4376	0.26	0.66	0.49	0.49	0.3724	0.66	1	T	0.0	B	0.0	B	0.000	N	0.999	P	-1.59	N	1.6	T	-0.943	T	0.000	T	0.146	-0.349	2.349	5.32	1.246	3.048	14.217	-0.349307	NA	1	0.295465	0.405583	NA	0.312	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=mult|single;CLNACC=RCV000039389.3|RCV000125539.1;CLNDSDB=.|.;CLNDSDBID=.|.	11.4030684
512	8	23021346	23021346	G	A	exonic	TNFRSF10D	NA	nonsynonymous SNV	TNFRSF10D:NM_003840:exon1:c.C103T:p.P35S	exonic	ENSG00000173530	NA	nonsynonymous SNV	ENSG00000173530:ENST00000312584:exon1:c.C103T:p.P35S	NA	NA	8p21.3	NA	Name=ZNF263,Pol2(b),Pol2	Name=135	NA	rs11135703	0.28	0.28	0.244	0.259984	0.1133	0.5655	0.33	0.2035	0.1227	0.12	0.55	0.28	0.18	0.2073	0.55	0.3	T	0.997	D	0.879	P	0.756	U	1.000	P	1.895	L	-1.55	D	-0.979	T	0.000	T	0.099	1.81	12.01	0.373	0.110	0.836	3.631	1.810184	1.810184	0.32	0.112209	0.209941	NA	0.196	NA	11.4005244
512	1	20915701	20915701	A	C	exonic	CDA	NA	nonsynonymous SNV	CDA:NM_001785:exon1:c.A79C:p.K27Q	exonic	ENSG00000158825	NA	nonsynonymous SNV	ENSG00000158825:ENST00000375071:exon1:c.A79C:p.K27Q	Score=472;Name=lod=110	NA	1p36.12	NA	Name=Pol2	NA	NA	rs2072671	0.21	0.21	0.215	0.192692	0.3141	0.122	0.3055	0.0673	0.2301	0.33	0.13	0.28	0.08	0.2758	0.35	0.42	T	0.004	B	0.005	B	0.001	N	0.000	P	0.465	N	0.98	T	-0.964	T	0.000	T	0.194	2.326	13.74	3.98	2.169	1.604	7.795	2.326085	2.326085	0.64	0.346279	0.103495	NA	0.138	NA	11.3971544
513	2	71043461	71043461	C	T	exonic	CLEC4F	NA	nonsynonymous SNV	CLEC4F:NM_001258027:exon4:c.G1052A:p.R351H,CLEC4F:NM_173535:exon4:c.G1052A:p.R351H	exonic	ENSG00000152672	NA	nonsynonymous SNV	ENSG00000152672:ENST00000272367:exon4:c.G1052A:p.R351H,ENSG00000152672:ENST00000426626:exon4:c.G1052A:p.R351H	NA	NA	2p13.3	Score=818;Name=V$OCT1_01	NA	NA	NA	rs722896	0.34	0.34	0.342	0.338059	0.3101	0.5248	0.4006	0.1195	0.4254	0.3	0.6	0.34	0.12	0.3313	0.6	0.59	T	0.006	B	0.001	B	0.298	N	1.000	P	-0.22	N	-1.66	D	-1.040	T	0.000	T	0.015	0.693	7.7	-5.05	-1.226	-1.034	11.540	0.692882	NA	0.45	0.301977	0.167726	NA	0.29	NA	11.3899564
513	16	15131962	15131962	A	G	exonic	NTAN1	NA	nonsynonymous SNV	NTAN1:NM_001270767:exon8:c.T544C:p.S182P,NTAN1:NM_001270766:exon9:c.T544C:p.S182P,NTAN1:NM_173474:exon10:c.T859C:p.S287P	exonic	ENSG00000157045	NA	nonsynonymous SNV	ENSG00000157045:ENST00000287706:exon10:c.T859C:p.S287P	Score=441;Name=lod=83	NA	16p13.11	Score=906;Name=V$STAT5B_01	NA	NA	NA	rs1135999	0.33	0.33	0.265	0.34405	0.3072	0.37	0.5331	0.1838	0.4376	0.32	0.38	0.48	0.19	0.3411	0.48	1	T	0.0	B	0.0	B	0.000	N	0.000	P	-2.54	N	1.9	T	-0.928	T	0.000	T	0.089	0.729	7.877	5.87	1.644	5.104	14.696	0.729487	NA	1	0.298256	0.224169	NA	0.406	NA	11.3867774
514	1	151315287	151315287	G	C	exonic	RFX5	NA	nonsynonymous SNV	RFX5:NM_000449:exon11:c.C1226G:p.P409R,RFX5:NM_001025603:exon11:c.C1226G:p.P409R	exonic	ENSG00000143390	NA	nonsynonymous SNV	ENSG00000143390:ENST00000452513:exon10:c.C1106G:p.P369R,ENSG00000143390:ENST00000290524:exon11:c.C1226G:p.P409R,ENSG00000143390:ENST00000368870:exon11:c.C1226G:p.P409R,ENSG00000143390:ENST00000392746:exon11:c.C1226G:p.P409R,ENSG00000143390:ENST00000452671:exon11:c.C1226G:p.P409R	Score=243;Name=lod=13	NA	1q21.3	NA	NA	NA	NA	rs2233854	0.08	0.08	0.07	0.0634984	0.171	NA	0.0994	0.003	0.0746	0.18	NA	0.1	0.002	0.1188	0.18	0	D	0.664	P	0.12	B	0.126	N	0.984	P	1.59	L	1.32	T	-1.093	T	0.033	T	0.312	1.252	10.08	3.26	0.749	1.746	8.749	1.252305	1.252305	0	0.16186	0.034952	NA	0.138	NA	11.3816734
514	7	21924014	21924014	A	G	exonic	DNAH11	NA	nonsynonymous SNV	DNAH11:NM_001277115:exon76:c.A12493G:p.M4165V	exonic	ENSG00000105877	NA	nonsynonymous SNV	ENSG00000105877:ENST00000409508:exon76:c.A12493G:p.M4165V,ENSG00000105877:ENST00000328843:exon77:c.A12514G:p.M4172V	Score=527;Name=lod=184	NA	7p15.3	Score=801;Name=V$POU3F2_01	NA	NA	NA	rs6461613	0.65	0.65	0.608	0.622404	0.8539	0.6617	0.634	0.326	0.7362	0.86	0.62	0.65	0.34	0.7558	0.86	0.09	T	0.716	P	0.268	B	0.000	D	0.000	P	.	.	3.14	T	-1.147	T	0.000	T	0.165	2.131	13.08	5.7	2.161	3.699	12.383	2.131495	2.131495	0.02	0.847759	0.439538	NA	0.674	NA	11.3758744
515	17	2091765	2091765	C	T	exonic	SMG6	NA	nonsynonymous SNV	SMG6:NM_001256828:exon3:c.G190A:p.A64T,SMG6:NM_001256827:exon4:c.G190A:p.A64T,SMG6:NM_017575:exon11:c.G2914A:p.A972T	exonic	ENSG00000070366	NA	nonsynonymous SNV	ENSG00000070366:ENST00000536871:exon3:c.G190A:p.A64T,ENSG00000070366:ENST00000570606:exon3:c.G190A:p.A64T,ENSG00000070366:ENST00000570668:exon3:c.G190A:p.A64T,ENSG00000070366:ENST00000571442:exon3:c.G190A:p.A64T,ENSG00000070366:ENST00000575663:exon3:c.G190A:p.A64T,ENSG00000070366:ENST00000354901:exon4:c.G190A:p.A64T,ENSG00000070366:ENST00000570659:exon4:c.G190A:p.A64T,ENSG00000070366:ENST00000263073:exon11:c.G2914A:p.A972T,ENSG00000070366:ENST00000544865:exon11:c.G2821A:p.A941T	Score=559;Name=lod=249	NA	17p13.3	NA	NA	NA	NA	rs903160	0.35	0.35	0.363	0.403754	0.3091	0.3264	0.3012	0.5499	0.456	0.32	0.28	0.3	0.54	0.3491	0.54	0.37	T	0.0	B	0.001	B	0.000	D	0.722	P	-0.55	N	1.63	T	-0.922	T	0.000	T	0.316	2.122	13.05	2.5	1.176	1.791	4.303	2.122399	2.122399	0.43	0.307442	0.491602	NA	0.362	NA	11.3676914
516	3	113379865	113379865	G	C	exonic	KIAA2018	NA	nonsynonymous SNV	KIAA2018:NM_001009899:exon7:c.C664G:p.P222A	exonic	ENSG00000176542	NA	nonsynonymous SNV	ENSG00000176542:ENST00000478658:exon5:c.C664G:p.P222A,ENSG00000176542:ENST00000316407:exon7:c.C664G:p.P222A	Score=623;Name=lod=455	NA	3q13.2	Score=868;Name=V$NF1_Q6	NA	Name=30	NA	rs9866806	0.26	0.26	0.231	0.206669	0.3519	0.2004	0.1758	0.1536	0.1575	0.38	0.21	0.21	0.16	0.2885	0.38	0.16	T	0.104	B	0.023	B	0.117	N	0.000	P	0	N	2.6	T	-0.901	T	0.000	T	0.085	0.649	7.481	3.04	1.179	0.716	1.794	0.648761	NA	0.42	0.332972	0.147797	NA	0.087	NA	11.3599614
516	12	117693817	117693817	G	A	exonic	NOS1	NA	nonsynonymous SNV	NOS1:NM_001204218:exon17:c.C2557T:p.P853S	exonic	ENSG00000089250	NA	nonsynonymous SNV	ENSG00000089250:ENST00000338101:exon16:c.C2557T:p.P853S	Score=561;Name=lod=254	NA	12q24.22	Score=781;Name=V$STAT1_01	NA	NA	NA	rs11068428	0.36	0.36	0.321	0.347444	0.3161	0.502	0.5231	0.2012	0.2935	0.33	0.46	0.5	0.19	0.3457	0.5	0.32	T	.	.	.	.	.	.	0.000	P	0	N	5.08	T	-1.087	T	0.000	T	0.165	1.296	10.24	5.05	1.529	2.955	11.083	1.296247	1.296247	0.8	0.314164	0.189498	NA	0.362	NA	11.3573694
517	7	100371474	100371474	G	A	exonic	ZAN	NA	unknown	UNKNOWN	exonic	ENSG00000146839	NA	nonsynonymous SNV	ENSG00000146839:ENST00000538115:exon30:c.G5765A:p.R1922H,ENSG00000146839:ENST00000542585:exon30:c.G5765A:p.R1922H,ENSG00000146839:ENST00000546213:exon30:c.G1298A:p.R433H,ENSG00000146839:ENST00000546292:exon30:c.G5765A:p.R1922H	Score=259;Name=lod=15	NA	7q22.1	NA	NA	NA	NA	rs78193191	NA	NA	NA	0.445487	0.3419	0.7867	0.5418	0.2141	0.4448	NA	NA	NA	NA	0.4724	0.33	0.22	T	0.793	P	0.169	B	0.570	N	1.000	N	2.34	M	2.44	T	-0.648	T	0.364	T	0.25	3.459	17.72	2.73	1.222	1.873	6.138	3.459247	3.459247	NA	NA	NA	NA	0.297	NA	11.3523667
517	2	238244963	238244963	A	G	exonic	COL6A3	NA	nonsynonymous SNV	COL6A3:NM_057166:exon37:c.T6959C:p.M2320T,COL6A3:NM_057167:exon39:c.T8162C:p.M2721T,COL6A3:NM_004369:exon40:c.T8780C:p.M2927T	exonic	ENSG00000163359	NA	nonsynonymous SNV	ENSG00000163359:ENST00000472056:exon37:c.T6959C:p.M2320T,ENSG00000163359:ENST00000409809:exon38:c.T8162C:p.M2721T,ENSG00000163359:ENST00000346358:exon39:c.T8180C:p.M2727T,ENSG00000163359:ENST00000347401:exon39:c.T8177C:p.M2726T,ENSG00000163359:ENST00000353578:exon39:c.T8162C:p.M2721T,ENSG00000163359:ENST00000295550:exon40:c.T8780C:p.M2927T	NA	NA	2q37.3	NA	Name=PAX5-C20	Name=5	NA	rs6728818	0.65	0.65	0.675	0.636581	0.6899	0.5417	0.549	0.8101	0.5072	0.66	0.55	0.58	0.79	0.6386	0.79	1	T	0.0	B	0.0	B	0.270	N	1.000	P	0.14	N	-2.18	D	-0.941	T	0.000	T	0.008	0.5	6.71	2.21	0.255	1.747	5.073	0.499605	NA	NA	0.653757	0.780073	NA	0.725	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000081013.2;CLNDSDB=.;CLNDSDBID=.	11.3510764
517	22	24579049	24579049	G	A	exonic	SUSD2	NA	nonsynonymous SNV	SUSD2:NM_019601:exon2:c.G101A:p.R34H	exonic	ENSG00000099994	NA	nonsynonymous SNV	ENSG00000099994:ENST00000358321:exon2:c.G101A:p.R34H	Score=295;Name=lod=21	NA	22q11.23	NA	NA	NA	NA	rs35660748	NA	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4841	NA	0.06	T	0.772	P	0.133	B	0.050	N	0.907	N	1.6	L	-0.0	T	-0.860	T	0.133	T	0.386	2.126	13.07	2.74	2.151	1.506	5.289	2.126204	2.126204	0.01	NA	NA	ID=COSM1178084;OCCURENCE=1(prostate)	NA	NA	11.3492334
517	9	126783433	126783433	G	C	exonic	LHX2	NA	synonymous SNV	LHX2:NM_004789:exon4:c.G783C:p.P261P	exonic	ENSG00000106689	NA	synonymous SNV	ENSG00000106689:ENST00000373615:exon4:c.G783C:p.P261P	Score=493;Name=lod=135	NA	9q33.3	Score=730;Name=V$PAX4_04	Name=Nrf1,PAX5-N19,PAX5-C20	Name=17	NA	rs1042486	0.39	0.39	0.352	0.359026	0.4433	0.4286	0.4712	0.1846	0.3569	0.45	0.41	0.44	0.21	0.4235	0.45	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.999	T	0.000	T	.	1.269	10.14	-3.77	-1.288	0.039	12.213	1.268589	1.268589	NA	0.453721	0.238311	NA	0.333	NA	11.3461456
518	9	78936358	78936358	G	A	exonic	PCSK5	NA	nonsynonymous SNV	PCSK5:NM_001190482:exon30:c.G3824A:p.G1275D	exonic	ENSG00000099139	NA	nonsynonymous SNV	ENSG00000099139:ENST00000424854:exon24:c.G2924A:p.G975D,ENSG00000099139:ENST00000545128:exon30:c.G3824A:p.G1275D	NA	NA	9q21.13	NA	Name=JunD,c-Jun	Name=102	NA	rs1110222	0.31	0.31	0.327	0.319089	0.341	0.1369	0.2378	0.4592	0.3528	0.34	0.13	0.27	0.48	0.3203	0.48	0.42	T	.	.	.	.	0.009	N	1.000	P	2.14	M	1.52	T	-0.885	T	0.000	T	0.053	0.946	8.856	4.61	1.334	0.922	8.559	0.945778	NA	0.34	0.329985	0.442352	NA	0.268	NA	11.3420484
518	11	56380134	56380134	C	G	exonic	OR5M1	NA	nonsynonymous SNV	OR5M1:NM_001004740:exon1:c.G845C:p.S282T	exonic	ENSG00000255012	NA	nonsynonymous SNV	ENSG00000255012:ENST00000526538:exon1:c.G845C:p.S282T	Score=265;Name=lod=16	NA	11q12.1	NA	NA	NA	NA	rs4939078	0.4	0.4	0.338	0.418331	0.3141	0.622	0.5605	0.1815	0.5348	0.31	0.62	0.55	0.16	0.3789	0.62	0.01	D	0.996	D	0.955	D	.	.	0.985	P	-1.85	N	1.15	T	-1.045	T	0.000	T	0.128	1.884	12.26	2.77	0.775	0.674	6.886	1.884258	1.884258	NA	0.29917	0.198144	NA	0.341	NA	11.3411634
518	17	37922259	37922259	G	A	exonic	IKZF3	NA	synonymous SNV	IKZF3:NM_001257413:exon4:c.C651T:p.S217S,IKZF3:NM_001257412:exon5:c.C768T:p.S256S,IKZF3:NM_001257414:exon5:c.C912T:p.S304S,IKZF3:NM_001257409:exon6:c.C1095T:p.S365S,IKZF3:NM_001257411:exon6:c.C885T:p.S295S,IKZF3:NM_183231:exon6:c.C1029T:p.S343S,IKZF3:NM_183232:exon6:c.C1080T:p.S360S,IKZF3:NM_001257408:exon7:c.C1212T:p.S404S,IKZF3:NM_001257410:exon7:c.C1053T:p.S351S,IKZF3:NM_183228:exon7:c.C1146T:p.S382S,IKZF3:NM_183229:exon7:c.C1197T:p.S399S,IKZF3:NM_183230:exon7:c.C1197T:p.S399S,IKZF3:NM_012481:exon8:c.C1314T:p.S438S	exonic	ENSG00000161405	NA	synonymous SNV	ENSG00000161405:ENST00000583368:exon3:c.C573T:p.S191S,ENSG00000161405:ENST00000377952:exon4:c.C651T:p.S217S,ENSG00000161405:ENST00000377945:exon5:c.C912T:p.S304S,ENSG00000161405:ENST00000394189:exon5:c.C768T:p.S256S,ENSG00000161405:ENST00000346243:exon6:c.C1080T:p.S360S,ENSG00000161405:ENST00000377944:exon6:c.C885T:p.S295S,ENSG00000161405:ENST00000439016:exon6:c.C1029T:p.S343S,ENSG00000161405:ENST00000439167:exon6:c.C1095T:p.S365S,ENSG00000161405:ENST00000350532:exon7:c.C1197T:p.S399S,ENSG00000161405:ENST00000351680:exon7:c.C1197T:p.S399S,ENSG00000161405:ENST00000377958:exon7:c.C1053T:p.S351S,ENSG00000161405:ENST00000467757:exon7:c.C1146T:p.S382S,ENSG00000161405:ENST00000535189:exon7:c.C1212T:p.S404S,ENSG00000161405:ENST00000346872:exon8:c.C1314T:p.S438S	Score=662;Name=lod=654	Name=Primary biliary cirrhosis	17q12	NA	Name=ZNF274	NA	NA	rs907092	0.35	0.35	0.345	0.298722	0.4732	0.2937	0.3401	0.1384	0.3119	0.48	0.35	0.36	0.13	0.4006	0.48	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.873	T	0.000	T	.	0.845	8.414	4.73	1.382	2.032	9.981	0.844787	NA	NA	0.453372	0.167045	ID=COSM148259;OCCURENCE=1(stomach)	0.333	NA	11.3394946
518	4	1164277	1164277	C	G	exonic	SPON2	NA	nonsynonymous SNV	SPON2:NM_012445:exon5:c.G724C:p.V242L,SPON2:NM_001128325:exon6:c.G724C:p.V242L,SPON2:NM_001199021:exon7:c.G724C:p.V242L	exonic	ENSG00000159674	NA	nonsynonymous SNV	ENSG00000159674:ENST00000290902:exon5:c.G724C:p.V242L,ENSG00000159674:ENST00000431380:exon6:c.G724C:p.V242L	Score=295;Name=lod=21	NA	4p16.3	NA	NA	NA	NA	rs2279279	0.58	0.58	0.535	0.553315	0.6829	0.6766	0.7089	0.2239	0.6278	0.67	0.7	0.67	0.23	0.6396	0.7	0.46	T	0.27	B	0.071	B	0.001	D	0.067	P	2.015	M	2.99	T	-1.010	T	0.000	T	0.102	2.136	13.1	3.83	2.180	2.473	7.163	2.135501	2.135501	0.61	0.671977	0.279165	NA	0.5	NA	11.3388564
518	1	46810530	46810530	A	G	exonic	NSUN4	NA	nonsynonymous SNV	NSUN4:NM_001256127:exon2:c.A4G:p.T2A,NSUN4:NM_001256128:exon2:c.A4G:p.T2A,NSUN4:NM_199044:exon2:c.A151G:p.T51A	exonic	ENSG00000117481	NA	nonsynonymous SNV	ENSG00000117481:ENST00000307089:exon2:c.A151G:p.T51A,ENSG00000117481:ENST00000474844:exon2:c.A151G:p.T51A,ENSG00000117481:ENST00000537428:exon2:c.A4G:p.T2A,ENSG00000117481:ENST00000536062:exon3:c.A4G:p.T2A	Score=497;Name=lod=139	NA	1p33	NA	NA	NA	NA	rs3737744	0.35	0.35	0.338	0.304513	0.3419	0.5169	0.3559	0.1415	0.2311	0.35	0.49	0.4	0.16	0.3227	0.49	0.5	T	0.004	B	0.005	B	0.000	D	0.002	P	1.445	L	2.54	T	-0.912	T	0.000	T	0.252	3.001	16.01	5.45	2.080	5.480	15.186	3.001459	3.001459	NA	0.331279	0.181798	NA	0.159	NA	11.3374544
518	19	9002504	9002504	T	C	exonic	MUC16	NA	nonsynonymous SNV	MUC16:NM_024690:exon51:c.A40312G:p.N13438D	exonic	ENSG00000181143	NA	nonsynonymous SNV	ENSG00000181143:ENST00000380951:exon3:c.A235G:p.N79D,ENSG00000181143:ENST00000397910:exon51:c.A40312G:p.N13438D	Score=278;Name=lod=18	NA	19p13.2	NA	NA	NA	NA	rs78327556	NA	NA	0.31	0.000798722	NA	NA	NA	0.003	NA	NA	NA	NA	NA	0.4965	NA	0.2	T	0.945	P	0.959	D	.	.	.	.	2.81	M	1.19	T	-0.730	T	0.198	T	0.281	2.075	12.89	1.72	0.474	1.298	4.463	2.074535	2.074535	0.34	NA	NA	NA	NA	NA	11.3368334
518	11	17351683	17351683	C	G	exonic	NUCB2	NA	nonsynonymous SNV	NUCB2:NM_005013:exon12:c.C1012G:p.Q338E	exonic	ENSG00000070081	NA	nonsynonymous SNV	ENSG00000070081:ENST00000458064:exon9:c.C922G:p.Q308E,ENSG00000070081:ENST00000323688:exon12:c.C1012G:p.Q338E,ENSG00000070081:ENST00000529010:exon12:c.C1012G:p.Q338E	Score=579;Name=lod=302	NA	11p15.1	NA	NA	NA	NA	rs757081	0.26	0.26	0.233	0.237819	0.3111	0.3552	0.2795	0.0182	0.3088	0.3	0.38	0.28	0.03	0.3665	0.38	0.64	T	0.054	B	0.05	B	0.000	D	0.000	P	1.225	L	2.38	T	-0.977	T	0.000	T	0.16	1.546	11.12	5.7	2.692	3.992	15.332	1.546059	1.546059	0.44	0.320453	0.058333	NA	0.188	NA	11.3352804
519	9	140611555	140611555	A	G	exonic	EHMT1	NA	nonsynonymous SNV	EHMT1:NM_001145527:exon3:c.A563G:p.D188G,EHMT1:NM_024757:exon3:c.A563G:p.D188G	exonic	ENSG00000181090	NA	nonsynonymous SNV	ENSG00000181090:ENST00000334856:exon3:c.A470G:p.D157G,ENSG00000181090:ENST00000460843:exon3:c.A563G:p.D188G,ENSG00000181090:ENST00000462484:exon3:c.A563G:p.D188G	NA	NA	9q34.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.39	T	0.005	B	0.003	B	0.137	N	1.000	N	1.39	L	1.69	T	-0.991	T	0.180	T	0.135	2.146	13.13	4.62	2.236	1.808	7.636	2.145627	2.145627	0.04	NA	NA	NA	NA	NA	11.3333334
519	20	33583331	33583331	A	G	exonic	MYH7B	NA	nonsynonymous SNV	MYH7B:NM_020884:exon28:c.A3019G:p.K1007E	exonic	ENSG00000078814	NA	nonsynonymous SNV	ENSG00000078814:ENST00000262873:exon26:c.A3019G:p.K1007E	Score=499;Name=lod=142	NA	20q11.22	Score=866;Name=V$RORA1_01	NA	NA	NA	rs2425015	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	T	0.0	B	0.0	B	0.003	N	0.992	P	-3.86	N	-1.64	D	-0.902	T	0.000	T	0.225	1.729	11.74	5.38	1.534	7.797	14.482	1.728772	1.728772	1	NA	NA	NA	1	NA	11.3333334
519	3	49841903	49841903	G	A	exonic	FAM212A	NA	nonsynonymous SNV	FAM212A:NM_203370:exon2:c.G347A:p.R116H	exonic	ENSG00000185614	NA	nonsynonymous SNV	ENSG00000185614:ENST00000333323:exon2:c.G347A:p.R116H	Score=278;Name=lod=18	NA	3p21.31	NA	Name=ZNF263,Max	Name=30	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000008259	NA	0.34	T	0.007	B	0.006	B	0.630	N	0.953	N	-0.115	N	.	.	-1.005	T	0.039	T	0.149	0.458	6.489	1.95	0.156	0.528	5.073	0.458382	NA	0.24	NA	NA	NA	NA	NA	11.3333251
519	1	44595144	44595144	G	T	exonic	KLF17	NA	nonsynonymous SNV	KLF17:NM_173484:exon2:c.G201T:p.M67I	exonic	ENSG00000171872	NA	nonsynonymous SNV	ENSG00000171872:ENST00000372299:exon2:c.G201T:p.M67I	NA	NA	1p34.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000008433	NA	0.09	T	0.16	B	0.027	B	0.233	N	1.000	N	0.55	N	3.2	T	-0.999	T	0.015	T	0.038	1.891	12.28	3.66	1.520	1.800	10.296	1.89087	1.89087	0.05	NA	NA	NA	NA	NA	11.333325
519	17	48435851	48435851	G	A	exonic	XYLT2	NA	nonsynonymous SNV	XYLT2:NM_022167:exon10:c.G2225A:p.R742H	exonic	ENSG00000015532	NA	nonsynonymous SNV	ENSG00000015532:ENST00000017003:exon10:c.G2225A:p.R742H	Score=587;Name=lod=324	NA	17q21.33	NA	NA	NA	NA	rs369581548	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00002489	NA	0.14	T	0.023	B	0.009	B	0.014	N	1.000	D	1.59	L	3.56	T	-1.002	T	0.014	T	0.235	3.337	17.23	2.62	0.571	1.659	7.786	3.337102	3.337102	0.03	NA	NA	NA	NA	NA	11.3333085
519	22	46804943	46804943	T	C	exonic	CELSR1	NA	nonsynonymous SNV	CELSR1:NM_014246:exon9:c.A5176G:p.S1726G	exonic	ENSG00000075275	NA	nonsynonymous SNV	ENSG00000075275:ENST00000262738:exon9:c.A5176G:p.S1726G	Score=235;Name=lod=12	NA	22q13.31	NA	NA	NA	NA	rs201049711	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00004212	NA	1	T	0.0	B	0.0	B	0.001	N	1.000	D	-2.12	N	-0.08	T	-0.939	T	0.044	T	0.061	-1.033	0.216	2.45	0.355	1.784	11.220	-1.032644	NA	1	NA	NA	NA	NA	NA	11.3332913
519	1	196963210	196963210	A	G	exonic	CFHR5	NA	nonsynonymous SNV	CFHR5:NM_030787:exon4:c.A431G:p.K144R	exonic	ENSG00000134389	NA	nonsynonymous SNV	ENSG00000134389:ENST00000256785:exon4:c.A431G:p.K144R,ENSG00000134389:ENST00000367414:exon4:c.A503G:p.K168R	Score=251;Name=lod=14	NA	1q31.3	NA	NA	NA	NA	rs201787238	NA	NA	NA	0.000199681	NA	NA	0.0014	NA	NA	NA	NA	NA	NA	0.00007569	0.0002	.	.	0.378	B	0.15	B	.	.	1.000	N	0.805	L	1.64	T	-0.902	T	0.224	T	0.106	1.534	11.08	3.98	1.448	1.781	9.268	1.533854	1.533854	0.01	0	0.000228	NA	NA	NA	11.3332577
519	4	159091777	159091777	C	G	exonic	FAM198B	NA	nonsynonymous SNV	FAM198B:NM_001031700:exon2:c.G751C:p.G251R,FAM198B:NM_001128424:exon2:c.G751C:p.G251R,FAM198B:NM_016613:exon2:c.G751C:p.G251R	exonic	ENSG00000164125	NA	nonsynonymous SNV	ENSG00000164125:ENST00000296530:exon2:c.G751C:p.G251R,ENSG00000164125:ENST00000393807:exon2:c.G751C:p.G251R,ENSG00000164125:ENST00000585682:exon2:c.G751C:p.G251R,ENSG00000164125:ENST00000592057:exon2:c.G751C:p.G251R	NA	NA	4q32.1	NA	Name=TAF1,CTCF_(SC-5916),Rad21,c-Myc,CTCF	Name=34	NA	NA	NA	NA	NA	0.000199681	NA	0.001	NA	NA	NA	NA	NA	NA	NA	0.0001	NA	0.29	T	0.01	B	0.022	B	0.124	N	1.000	N	1.845	L	1.6	T	-1.009	T	0.056	T	0.093	0.525	6.844	2.89	0.487	0.352	0.548	0.524885	NA	0.23	NA	NA	NA	NA	NA	11.3332334
519	10	135342118	135342118	C	T	exonic	CYP2E1	NA	nonsynonymous SNV	CYP2E1:NM_000773:exon2:c.C311T:p.P104L	exonic	ENSG00000130649	NA	nonsynonymous SNV	ENSG00000130649:ENST00000252945:exon2:c.C311T:p.P104L,ENSG00000130649:ENST00000463117:exon4:c.C311T:p.P104L	NA	NA	10q26.3	Score=861;Name=V$NFKB_C	NA	Name=7	NA	NA	NA	NA	NA	0.000199681	NA	NA	0.0014	NA	NA	NA	NA	NA	NA	0.0002	NA	0.01	D	0.122	B	0.036	B	0.020	N	1.000	N	1.685	L	-0.41	T	-0.909	T	0.175	T	0.271	2.605	14.67	-0.662	-0.189	0.769	3.784	2.604515	2.604515	0	NA	NA	NA	NA	NA	11.3331334
519	12	50366997	50366997	T	G	exonic	AQP6	NA	nonsynonymous SNV	AQP6:NM_001652:exon1:c.T41G:p.M14R	exonic	ENSG00000086159	NA	nonsynonymous SNV	ENSG00000086159:ENST00000315520:exon1:c.T41G:p.M14R	NA	NA	12q13.12	NA	NA	NA	NA	rs144813201	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0001	0.0002	0	D	0.003	B	0.001	B	0.297	N	0.977	N	1.355	L	-2.16	D	-0.607	T	0.473	T	0.174	1.221	9.954	-4.12	-0.913	-1.076	6.273	1.221033	NA	0	0.000233	0.000227	NA	NA	NA	11.3330004
519	11	102398322	102398322	C	G	exonic	MMP7	NA	nonsynonymous SNV	MMP7:NM_002423:exon3:c.G417C:p.E139D	exonic	ENSG00000137673	NA	nonsynonymous SNV	ENSG00000137673:ENST00000260227:exon3:c.G417C:p.E139D	Score=385;Name=lod=49	NA	11q22.2	NA	NA	NA	NA	rs141956671	0.0009	0.0009	NA	0.00219649	NA	NA	NA	0.0083	NA	NA	NA	NA	0.0041	0.0004	0.0041	0.06	T	0.934	P	0.725	P	0.271	N	1.000	N	1.965	M	0.71	T	-0.966	T	0.167	T	0.193	2.329	13.74	1.4	0.398	-1.476	5.537	2.328734	2.328734	0.43	0	0.001816	NA	NA	NA	11.3329334
519	14	31765138	31765138	T	G	exonic	HEATR5A	NA	nonsynonymous SNV	HEATR5A:NM_015473:exon34:c.A5596C:p.T1866P	exonic	ENSG00000129493	NA	nonsynonymous SNV	ENSG00000129493:ENST00000439727:exon28:c.A4717C:p.T1573P,ENSG00000129493:ENST00000439348:exon32:c.A5353C:p.T1785P,ENSG00000129493:ENST00000389961:exon33:c.A5578C:p.T1860P,ENSG00000129493:ENST00000543095:exon34:c.A5596C:p.T1866P	Score=631;Name=lod=490	NA	14q12	NA	NA	Name=2	NA	rs200160216	NA	NA	NA	0.000798722	NA	NA	0.0058	NA	NA	NA	NA	NA	NA	0.0004	NA	0.06	T	0.941	P	0.796	P	0.013	N	1.000	D	1.61	L	-0.16	T	-0.592	T	0.307	T	0.673	2.321	13.72	0.688	-0.108	0.367	10.246	2.320866	2.320866	0.02	NA	NA	NA	NA	NA	11.3329334
519	19	19675769	19675769	C	T	exonic	PBX4	NA	nonsynonymous SNV	PBX4:NM_025245:exon6:c.G898A:p.A300T	exonic	ENSG00000105717	NA	nonsynonymous SNV	ENSG00000105717:ENST00000251203:exon6:c.G898A:p.A300T	Score=343;Name=lod=33	NA	19p13.11	Score=967;Name=V$MYOD_Q6	NA	NA	NA	rs116791423	NA	NA	NA	0.000599042	NA	0.002	NA	NA	0.001	NA	NA	NA	NA	0.0003	0.0005	0.6	T	0.003	B	0.001	B	0.015	N	0.817	D	1.005	L	-2.69	D	-0.708	T	0.435	T	0.051	0.832	8.355	-1.5	-0.431	0.405	4.164	0.831761	NA	0.79	0.000116	0.000454	NA	NA	NA	11.3329174
519	19	17321596	17321596	G	A	exonic	MYO9B	NA	nonsynonymous SNV	MYO9B:NM_001130065:exon38:c.G5869A:p.G1957S,MYO9B:NM_004145:exon38:c.G5869A:p.G1957S	exonic	ENSG00000099331	NA	nonsynonymous SNV	ENSG00000099331:ENST00000598419:exon4:c.G277A:p.G93S,ENSG00000099331:ENST00000597073:exon5:c.G388A:p.G130S,ENSG00000099331:ENST00000595641:exon36:c.G5821A:p.G1941S,ENSG00000099331:ENST00000397274:exon37:c.G5869A:p.G1957S,ENSG00000099331:ENST00000594824:exon38:c.G5869A:p.G1957S,ENSG00000099331:ENST00000595618:exon38:c.G5869A:p.G1957S	NA	NA	19p13.11	NA	NA	NA	NA	rs199522818	NA	NA	NA	0.000199681	NA	NA	NA	0.0008	NA	NA	NA	NA	NA	0.0003	0.0007	0.73	T	0.051	B	0.004	B	0.387	N	1.000	N	0.695	N	-1.77	D	-0.867	T	0.320	T	0.079	1.4	10.62	5.01	2.321	3.151	12.407	1.399974	1.399974	0.5	0.000118	0.000712	NA	NA	NA	11.3329154
519	14	62249083	62249083	C	T	exonic	SNAPC1	NA	nonsynonymous SNV	SNAPC1:NM_003082:exon8:c.C944T:p.P315L	exonic	ENSG00000023608	NA	nonsynonymous SNV	ENSG00000023608:ENST00000216294:exon8:c.C944T:p.P315L	Score=304;Name=lod=23	NA	14q23.2	NA	NA	NA	NA	rs140945950	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0006	0.0003	0.33	T	0.181	B	0.074	B	0.481	N	0.995	D	1.1	L	.	.	-1.099	T	0.181	T	0.194	1.529	11.06	5.28	1.602	0.528	14.525	1.528943	1.528943	0.03	0.000349	0	NA	NA	NA	11.3323844
519	1	10068261	10068261	A	G	exonic	RBP7	NA	nonsynonymous SNV	RBP7:NM_052960:exon3:c.A283G:p.T95A	exonic	ENSG00000162444	NA	nonsynonymous SNV	ENSG00000162444:ENST00000294435:exon3:c.A283G:p.T95A	Score=558;Name=lod=246	NA	1p36.22	NA	NA	NA	NA	rs145618174	NA	NA	NA	0.000199681	0.001	NA	NA	NA	NA	NA	NA	NA	NA	0.0003	0.0005	0.03	D	0.042	B	0.031	B	0.012	N	0.658	N	1.65	L	3.13	T	-1.093	T	0.021	T	0.204	2.279	13.58	2.99	0.656	4.396	6.305	2.278853	2.278853	0.03	0.000349	0.000454	NA	NA	NA	11.3316844
519	2	27424636	27424636	G	A	exonic	SLC5A6	NA	nonsynonymous SNV	SLC5A6:NM_021095:exon14:c.C1442T:p.S481F	exonic	ENSG00000138074	NA	nonsynonymous SNV	ENSG00000138074:ENST00000310574:exon14:c.C1442T:p.S481F,ENSG00000138074:ENST00000408041:exon15:c.C1442T:p.S481F	Score=532;Name=lod=194	NA	2p23.3	NA	NA	NA	NA	rs1395	0.62	0.62	0.604	0.532548	0.6928	0.8492	0.5245	0.1626	0.547	0.71	0.89	0.57	0.19	0.6193	0.89	0.05	D	0.012	B	0.011	B	0.401	N	0.072	P	1.845	L	-2.11	D	-0.919	T	0.000	T	0.13	2.234	13.43	4.78	1.391	2.014	12.560	2.234358	2.234358	0.03	0.689884	0.251475	NA	0.442	NA	11.3313494
519	8	24774812	24774812	G	A	exonic	NEFM	NA	nonsynonymous SNV	NEFM:NM_001105541:exon3:c.G316A:p.V106I,NEFM:NM_005382:exon3:c.G1444A:p.V482I	exonic	ENSG00000104722	NA	nonsynonymous SNV	ENSG00000104722:ENST00000221166:exon3:c.G1444A:p.V482I,ENSG00000104722:ENST00000433454:exon3:c.G316A:p.V106I,ENSG00000104722:ENST00000437366:exon3:c.G1444A:p.V482I,ENSG00000104722:ENST00000518131:exon3:c.G1444A:p.V482I	NA	NA	8p21.2	NA	NA	NA	NA	rs61751047	NA	NA	NA	0.000998403	0.001	NA	NA	0.003	NA	NA	NA	NA	NA	0.0006	0.0034	0.29	T	0.002	B	0.001	B	0.075	N	1.000	N	2.35	M	-1.61	D	-0.171	T	0.702	D	0.036	-0.907	0.424	1.68	0.499	1.785	6.416	-0.906998	NA	0.05	0.000465	0.003404	ID=COSM454338;OCCURENCE=1(breast)	NA	NA	11.3312684
519	3	124418879	124418879	T	C	exonic	KALRN	NA	synonymous SNV	KALRN:NM_007064:exon23:c.T2904C:p.Y968Y,KALRN:NM_001024660:exon56:c.T7995C:p.Y2665Y	exonic	ENSG00000160145	NA	synonymous SNV	ENSG00000160145:ENST00000428018:exon22:c.T2808C:p.Y936Y,ENSG00000160145:ENST00000291478:exon23:c.T2904C:p.Y968Y,ENSG00000160145:ENST00000360013:exon56:c.T7995C:p.Y2665Y	NA	NA	3q21.2	Score=858;Name=V$AP1_01	Name=FOSL2,TAF1,TCF4,HNF4A,HEY1,HNF4G_(SC-6558),RXRA,TBP	Name=22	NA	rs56047676	0.1	0.1	0.098	0.110423	0.1024	0.0843	0.1182	0.1415	0.0982	0.09	0.07	0.13	0.14	0.1118	0.15	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.936	T	0.002	T	.	0.985	9.021	-3.82	-0.618	-3.477	16.087	0.984823	NA	NA	0.121744	0.15025	NA	0.174	NA	11.3307226
519	11	19854088	19854088	G	A	exonic	NAV2	NA	nonsynonymous SNV	NAV2:NM_001111018:exon2:c.G134A:p.R45K,NAV2:NM_001244963:exon2:c.G326A:p.R109K,NAV2:NM_145117:exon2:c.G326A:p.R109K,NAV2:NM_182964:exon2:c.G326A:p.R109K	exonic	ENSG00000166833	NA	nonsynonymous SNV	ENSG00000166833:ENST00000349880:exon2:c.G326A:p.R109K,ENSG00000166833:ENST00000360655:exon2:c.G134A:p.R45K,ENSG00000166833:ENST00000396085:exon2:c.G326A:p.R109K,ENSG00000166833:ENST00000396087:exon2:c.G326A:p.R109K,ENSG00000166833:ENST00000527559:exon3:c.G113A:p.R38K,ENSG00000166833:ENST00000540292:exon3:c.G119A:p.R40K	Score=567;Name=lod=268	NA	11p15.1	NA	NA	Name=2	NA	rs6483617	0.42	0.42	0.407	0.405751	0.337	0.3542	0.3804	0.6672	0.1943	0.35	0.36	0.39	0.61	0.3476	0.66	.	.	0.0	B	0.0	B	0.000	N	0.000	P	-1.24	N	0.43	T	-0.956	T	0.000	T	0.193	0.964	8.932	5.83	1.042	6.383	11.722	0.963756	NA	1	0.318425	0.656207	NA	0.384	NA	11.3303084
519	11	18740269	18740269	G	A	exonic	IGSF22	NA	nonsynonymous SNV	IGSF22:NM_173588:exon8:c.C703T:p.R235W	exonic	ENSG00000179057	NA	nonsynonymous SNV	ENSG00000179057:ENST00000319338:exon8:c.C703T:p.R235W,ENSG00000179057:ENST00000513874:exon8:c.C703T:p.R235W	NA	NA	11p15.1	NA	NA	NA	NA	rs201466035	NA	NA	0	0.000599042	0.002	NA	0.0014	NA	NA	NA	NA	NA	NA	0.0007	0.0009	0.03	D	0.999	D	0.96	D	0.073	U	1.000	N	1.965	M	0.61	T	-0.918	T	0.191	T	0.424	2.987	15.96	-0.237	-0.329	0.141	3.840	2.987141	2.987141	0.06	0.000855	0	NA	NA	NA	11.3297784
519	2	72359636	72359636	G	C	exonic	CYP26B1	NA	nonsynonymous SNV	CYP26B1:NM_001277742:exon5:c.C1034G:p.A345G,CYP26B1:NM_019885:exon6:c.C1259G:p.A420G	exonic	ENSG00000003137	NA	nonsynonymous SNV	ENSG00000003137:ENST00000412253:exon5:c.C686G:p.A229G,ENSG00000003137:ENST00000546307:exon5:c.C1034G:p.A345G,ENSG00000003137:ENST00000001146:exon6:c.C1259G:p.A420G	Score=340;Name=lod=32	NA	2p13.2	NA	NA	NA	NA	rs7568553	0.02	0.02	0.014	0.0175719	NA	NA	0.0029	0.0651	NA	NA	NA	0.01	0.07	0.0048	0.07	0.42	T	0.002	B	0.025	B	0.001	N	0.949	N	0.03	N	-0.41	T	-1.118	T	0.011	T	0.082	1.826	12.06	4.24	1.530	2.951	4.218	1.825723	1.825723	0.43	0.000581	0.044712	NA	0.022	NA	11.3279524
519	2	37599896	37599896	A	C	exonic	QPCT	NA	nonsynonymous SNV	QPCT:NM_012413:exon7:c.A1012C:p.N338H	exonic	ENSG00000115828	NA	nonsynonymous SNV	ENSG00000115828:ENST00000444022:exon4:c.A307C:p.N103H,ENSG00000115828:ENST00000537448:exon6:c.A865C:p.N289H,ENSG00000115828:ENST00000338415:exon7:c.A1012C:p.N338H	Score=577;Name=lod=295	NA	2p22.2	NA	NA	NA	NA	rs139934664	0.0014	0.0014	0.001	0.00119808	0.003	NA	0.0029	0.0008	NA	0.0026	NA	NA	0.002	0.0014	0.0026	0.26	T	0.149	B	0.125	B	0.000	N	1.000	D	1.28	L	0.79	T	-1.048	T	0.111	T	0.121	2.15	13.14	2.09	0.108	3.308	14.373	2.149554	2.149554	0.14	0.001279	0.000681	NA	NA	NA	11.3276544
519	1	111957583	111957583	A	G	exonic	OVGP1	NA	nonsynonymous SNV	OVGP1:NM_002557:exon11:c.T1540C:p.Y514H	exonic	ENSG00000085465	NA	nonsynonymous SNV	ENSG00000085465:ENST00000369732:exon11:c.T1540C:p.Y514H	NA	NA	1p13.2	NA	Name=FOSL2,RXRA	NA	NA	rs1126656	0.19	0.19	0.125	NA	NA	NA	NA	NA	NA	0.22	0.13	0.19	0.22	0.0065	0.22	0.47	T	0.0	B	0.0	B	.	.	1.000	P	-1.24	N	3.83	T	-0.937	T	0.001	T	0.027	-0.615	1.263	-5.76	-3.042	-2.105	1.698	-0.615397	NA	0.11	NA	NA	NA	0.051	NA	11.3268334
520	1	184023529	184023529	A	C	exonic	TSEN15	NA	nonsynonymous SNV	TSEN15:NM_001127394:exon2:c.A177C:p.Q59H,TSEN15:NM_052965:exon2:c.A177C:p.Q59H	exonic	ENSG00000198860	NA	nonsynonymous SNV	ENSG00000198860:ENST00000361641:exon2:c.A177C:p.Q59H,ENSG00000198860:ENST00000423085:exon2:c.A177C:p.Q59H,ENSG00000198860:ENST00000485209:exon2:c.A177C:p.Q59H,ENSG00000198860:ENST00000533373:exon2:c.A177C:p.Q59H	Score=572;Name=lod=282	Name=Height	1q25.3	NA	NA	NA	NA	rs1046934	0.32	0.32	0.319	0.302915	0.327	0.4504	0.3026	0.1233	0.3691	0.33	0.46	0.31	0.15	0.3349	0.46	0.01	D	0.007	B	0.021	B	0.000	N	0.000	P	1.905	M	0.79	T	-0.977	T	0.000	T	0.38	3.4	17.48	1.56	0.094	1.476	5.549	3.399957	3.399957	0	0.347558	0.162733	NA	0.399	NA	11.3238754
520	22	38219570	38219570	C	G	exonic	GALR3	NA	nonsynonymous SNV	GALR3:NM_003614:exon1:c.C157G:p.P53A	exonic	ENSG00000128310	NA	nonsynonymous SNV	ENSG00000128310:ENST00000249041:exon1:c.C157G:p.P53A	Score=415;Name=lod=65	NA	22q13.1	NA	NA	NA	NA	rs78650836	0.0005	0.0005	NA	0.000998403	0.001	NA	0.0029	0.0008	0.001	NA	NA	0.0028	NA	0.0037	0.006	0.61	T	0.12	B	0.023	B	0.001	N	0.986	N	0.595	N	1.23	T	-1.053	T	0.031	T	0.323	1.644	11.45	4.24	2.885	2.077	6.697	1.643789	1.643789	0.76	0.006047	0.001135	NA	NA	NA	11.3225864
520	19	49206286	49206286	A	G	exonic	FUT2	NA	nonsynonymous SNV	FUT2:NM_000511:exon2:c.A73G:p.I25V,FUT2:NM_001097638:exon2:c.A73G:p.I25V	exonic	ENSG00000176920	NA	nonsynonymous SNV	ENSG00000176920:ENST00000391876:exon2:c.A73G:p.I25V,ENSG00000176920:ENST00000425340:exon2:c.A73G:p.I25V,ENSG00000176920:ENST00000522966:exon2:c.A73G:p.I25V	NA	NA	19q13.33	NA	NA	NA	NA	rs1800021	0.03	0.03	0.028	0.0317492	NA	NA	0.0072	0.1165	NA	NA	NA	0.01	0.1	0.0113	0.12	0.44	T	0.009	B	0.02	B	.	.	1.000	N	0.74	N	-4.05	D	-0.652	T	0.036	T	0.037	0.353	5.916	-6.4	-1.565	-1.895	10.915	0.353094	NA	0.3	0.000698	0.118702	NA	0.043	NA	11.3213354
520	15	89169738	89169738	G	A	exonic	AEN	NA	nonsynonymous SNV	AEN:NM_022767:exon2:c.G298A:p.G100R	exonic	ENSG00000181026	NA	nonsynonymous SNV	ENSG00000181026:ENST00000332810:exon2:c.G298A:p.G100R,ENSG00000181026:ENST00000379231:exon2:c.G298A:p.G100R,ENSG00000181026:ENST00000559528:exon2:c.G298A:p.G100R	NA	NA	15q26.1	NA	Name=Pol2	NA	NA	rs147477549	0.0032	0.0032	NA	0.00159744	0.006	NA	0.0014	0.0008	NA	0.01	NA	0.0028	0.002	0.0028	0.01	0.76	T	0.006	B	0.002	B	0.007	N	1.000	N	-0.255	N	2.31	T	-1.010	T	0.011	T	0.062	-0.57	1.433	-6.78	-1.137	-1.168	3.393	-0.569745	NA	0.48	0.003838	0.000455	NA	NA	NA	11.3206954
520	12	132626668	132626668	T	C	exonic	DDX51	NA	nonsynonymous SNV	DDX51:NM_175066:exon5:c.A884G:p.Q295R	exonic	ENSG00000185163	NA	nonsynonymous SNV	ENSG00000185163:ENST00000397333:exon5:c.A884G:p.Q295R	Score=525;Name=lod=182	NA	12q24.33	NA	NA	NA	NA	rs1133690	0.61	0.61	0.557	0.542332	0.6958	0.753	0.6772	0.1989	0.5358	0.69	0.77	0.68	0.24	0.6338	0.77	0.06	T	0.907	P	0.788	P	0.000	D	0.000	P	0.81	L	2.44	T	-1.172	T	0.000	T	0.233	4.453	23.7	4.71	1.756	5.419	12.153	4.45307	4.45307	0.26	0.685216	0.309182	NA	0.543	NA	11.3185174
520	4	23815662	23815662	C	T	exonic	PPARGC1A	NA	nonsynonymous SNV	PPARGC1A:NM_013261:exon8:c.G1444A:p.G482S	exonic	ENSG00000109819	NA	nonsynonymous SNV	ENSG00000109819:ENST00000264867:exon8:c.G1444A:p.G482S	Score=736;Name=lod=1310	NA	4p15.2	Score=807;Name=V$EVI1_01	NA	NA	NA	rs8192678	0.29	0.29	0.285	0.265775	0.3608	0.4425	0.2565	0.0454	0.2904	0.36	0.45	0.23	0.05	0.3081	0.45	1	T	0.053	B	0.004	B	0.000	N	0.000	P	-0.805	N	2.09	T	-0.944	T	0.000	T	0.024	-0.176	3.141	6.02	1.099	2.170	10.887	-0.176377	NA	1	0.347442	0.103268	NA	0.362	NA	11.3169914
520	2	220097286	220097286	G	A	exonic	ANKZF1	NA	nonsynonymous SNV	ANKZF1:NM_001042410:exon5:c.G439A:p.E147K,ANKZF1:NM_018089:exon5:c.G439A:p.E147K	exonic	ENSG00000163516	NA	nonsynonymous SNV	ENSG00000163516:ENST00000453432:exon4:c.G244A:p.E82K,ENSG00000163516:ENST00000323348:exon5:c.G439A:p.E147K,ENSG00000163516:ENST00000410034:exon5:c.G439A:p.E147K	NA	NA	2q35	NA	NA	NA	NA	rs200506719	0.0018	0.0018	NA	0.00199681	0.004	NA	NA	NA	0.0061	0.004	NA	0.0028	NA	0.0066	0.011	0.79	T	0.176	B	0.037	B	0.120	N	1.000	N	2.125	M	1.76	T	-1.009	T	0.042	T	0.469	1.857	12.17	4.66	1.576	2.407	10.022	1.856758	1.856758	0.04	0.006072	0.002347	NA	0.007	NA	11.3166614
520	19	5772823	5772823	G	C	exonic	CATSPERD	NA	nonsynonymous SNV	CATSPERD:NM_152784:exon20:c.G1788C:p.E596D	exonic	ENSG00000174898	NA	nonsynonymous SNV	ENSG00000174898:ENST00000381624:exon20:c.G1788C:p.E596D	NA	NA	19p13.3	NA	NA	NA	NA	rs143660393	0.0032	0.0032	0.004	0.00239617	0.008	NA	0.0043	NA	0.001	0.01	NA	0.01	NA	0.0042	0.01	0.01	D	1.0	D	0.996	D	0.307	N	1.000	N	2.045	M	1.67	T	-1.055	T	0.106	T	0.392	2.591	14.63	1.95	0.803	0.810	5.300	2.591332	2.591332	0.01	0.00531	0.00141	NA	0.036	NA	11.3158234
520	5	477508	477508	C	T	exonic	SLC9A3	NA	nonsynonymous SNV	SLC9A3:NM_004174:exon11:c.G1699A:p.V567M	exonic	ENSG00000066230	NA	nonsynonymous SNV	ENSG00000066230:ENST00000264938:exon11:c.G1699A:p.V567M,ENSG00000066230:ENST00000514375:exon11:c.G1672A:p.V558M	Score=456;Name=lod=95	NA	5p15.33	Score=783;Name=V$ER_Q6	NA	NA	NA	rs41282627	0.01	0.01	0.009	0.0103834	0.005	NA	0.0014	0.0227	0.0164	0.01	NA	NA	0.02	0.0064	0.043	1	T	0.002	B	0.001	B	0.026	N	1.000	N	-1.63	N	1.0	T	-0.940	T	0.025	T	0.109	0.054	4.298	3.71	0.724	1.407	10.051	0.054464	NA	1	0.006744	0.018157	NA	0.029	NA	11.3151894
521	5	167929035	167929035	G	A	exonic	RARS	NA	nonsynonymous SNV	RARS:NM_002887:exon9:c.G982A:p.V328I	exonic	ENSG00000113643	NA	nonsynonymous SNV	ENSG00000113643:ENST00000538719:exon8:c.G364A:p.V122I,ENSG00000113643:ENST00000231572:exon9:c.G982A:p.V328I	Score=393;Name=lod=53	NA	5q34	Score=814;Name=V$CEBP_C	NA	NA	NA	rs62385662	0.0046	0.0046	0.007	0.0103834	0.007	NA	0.0058	0.0008	0.0409	0.01	NA	0.01	NA	0.0084	0.011	0.72	T	0.003	B	0.014	B	0.000	N	0.897	N	-0.025	N	-0.24	T	-1.032	T	0.083	T	0.072	-0.765	0.773	3.99	0.904	2.042	9.332	-0.765124	NA	1	0.005008	0.000908	NA	0.007	NA	11.3129254
521	17	34190069	34190069	C	A	exonic	C17orf66	NA	nonsynonymous SNV	C17orf66:NM_152781:exon8:c.G686T:p.G229V	exonic	ENSG00000172653	NA	nonsynonymous SNV	ENSG00000172653:ENST00000311880:exon8:c.G686T:p.G229V,ENSG00000172653:ENST00000585840:exon8:c.G686T:p.G229V,ENSG00000172653:ENST00000592980:exon8:c.G566T:p.G189V,ENSG00000172653:ENST00000587573:exon9:c.G464T:p.G155V,ENSG00000172653:ENST00000589015:exon9:c.G584T:p.G195V	NA	NA	17q12	Score=822;Name=V$HNF4_01_B	NA	NA	NA	rs115641363	0.0032	0.0032	0	0.00279553	0.0099	NA	0.0029	NA	0.002	0.01	NA	NA	NA	0.0048	0.011	0.54	T	0.386	B	0.232	B	0.382	N	1.000	N	0.805	L	0.82	T	-1.056	T	0.052	T	0.171	0.701	7.741	-5.35	-1.235	-1.167	2.722	0.701267	NA	0.17	0.006163	0.001589	NA	0.007	NA	11.3124704
521	15	41819367	41819367	T	C	exonic	RPAP1	NA	nonsynonymous SNV	RPAP1:NM_015540:exon13:c.A1744G:p.R582G	exonic	ENSG00000103932	NA	nonsynonymous SNV	ENSG00000103932:ENST00000304330:exon13:c.A1744G:p.R582G,ENSG00000103932:ENST00000561603:exon13:c.A1744G:p.R582G,ENSG00000103932:ENST00000562303:exon13:c.A1744G:p.R582G	Score=575;Name=lod=290	NA	15q15.1	NA	NA	NA	NA	rs11630901	0.09	0.09	0.083	0.0658946	0.2008	NA	0.1153	0.0098	0.0358	0.21	NA	0.12	0.01	0.132	0.21	0	D	0.704	P	0.197	B	0.002	N	0.251	P	1.39	L	-0.87	T	-1.065	T	0.000	T	0.46	2.977	15.93	3.43	0.862	1.747	5.368	2.977355	2.977355	0.02	0.188256	0.037903	ID=COSM1372787;OCCURENCE=1(large_intestine)	0.043	NA	11.3122774
521	3	44692564	44692564	C	G	exonic	ZNF35	NA	nonsynonymous SNV	ZNF35:NM_003420:exon2:c.C5G:p.T2S	exonic	ENSG00000169981	NA	nonsynonymous SNV	ENSG00000169981:ENST00000296092:exon2:c.C5G:p.T2S,ENSG00000169981:ENST00000396056:exon2:c.C5G:p.T2S,ENSG00000169981:ENST00000399560:exon2:c.C5G:p.T2S,ENSG00000169981:ENST00000415571:exon2:c.C5G:p.T2S,ENSG00000169981:ENST00000432115:exon2:c.C5G:p.T2S,ENSG00000169981:ENST00000453164:exon2:c.C5G:p.T2S	Score=333;Name=lod=30	NA	3p21.31	NA	NA	NA	NA	rs2272044	0.31	0.31	0.275	0.315296	0.1402	0.7907	0.2983	0.0076	0.4335	0.15	0.81	0.27	0.01	0.2404	0.81	0	D	0.779	P	0.191	B	.	.	0.000	P	0.805	L	2.78	T	-1.167	T	0.000	T	0.133	3.725	18.92	4.08	2.298	0.427	12.070	3.725294	3.725294	0	0.141977	0.038584	NA	0.159	NA	11.3107564
521	8	110456917	110456917	G	A	exonic	PKHD1L1	NA	nonsynonymous SNV	PKHD1L1:NM_177531:exon38:c.G4819A:p.V1607I	exonic	ENSG00000205038	NA	nonsynonymous SNV	ENSG00000205038:ENST00000378402:exon38:c.G4819A:p.V1607I	Score=486;Name=lod=126	NA	8q23.1	NA	NA	NA	NA	rs73700891	0.01	0.01	0.016	0.0181709	0.008	NA	0.0159	0.0522	0.0031	0.01	NA	0.01	0.04	0.0095	0.04	0.41	T	0.059	B	0.059	B	0.000	D	0.998	N	1.1	L	-1.01	T	-1.006	T	0.083	T	0.025	0.101	4.545	2.54	0.901	1.540	8.559	0.101185	NA	0.3	0.008682	0.034965	NA	NA	NA	11.3071514
521	19	44981862	44981862	A	G	exonic	ZNF180	NA	nonsynonymous SNV	ZNF180:NM_013256:exon5:c.T836C:p.I279T	exonic	ENSG00000167384	NA	nonsynonymous SNV	ENSG00000167384:ENST00000391956:exon4:c.T761C:p.I254T,ENSG00000167384:ENST00000221327:exon5:c.T836C:p.I279T,ENSG00000167384:ENST00000592529:exon5:c.T755C:p.I252T	NA	NA	19q13.31	NA	Name=SETDB1	NA	NA	rs74472964	0.0032	0.0032	0.003	0.00379393	0.007	NA	0.0072	NA	0.0072	0.01	NA	0.01	NA	0.0081	0.012	0.09	T	0.372	B	0.074	B	0.087	N	0.997	N	0	N	3.28	T	-0.976	T	0.007	T	0.081	0.377	6.049	3.08	1.993	1.434	5.237	0.377467	NA	0.05	0.011982	0.001589	NA	0.007	NA	11.3062514
521	11	57886280	57886280	C	T	exonic	OR9I1	NA	nonsynonymous SNV	OR9I1:NM_001005211:exon1:c.G637A:p.V213I	exonic	ENSG00000172377	NA	nonsynonymous SNV	ENSG00000172377:ENST00000302610:exon1:c.G637A:p.V213I	NA	NA	11q12.1	NA	NA	NA	NA	rs113763198	0.01	0.01	0.007	0.00359425	0.0099	0.002	0.0014	NA	0.0051	0.01	0.0035	0.0028	NA	0.0065	0.011	0.66	T	0.096	B	0.025	B	0.001	D	0.995	N	0.72	N	1.27	T	-1.041	T	0.032	T	0.038	-0.932	0.375	3.96	1.429	-1.723	4.527	-0.93161	NA	0.33	0.011057	0.002045	NA	NA	NA	11.3058764
522	1	34401453	34401453	A	G	exonic	CSMD2	NA	nonsynonymous SNV	CSMD2:NM_052896:exon4:c.T500C:p.L167P	exonic	ENSG00000121904	NA	nonsynonymous SNV	ENSG00000121904:ENST00000241312:exon4:c.T500C:p.L167P,ENSG00000121904:ENST00000373381:exon4:c.T620C:p.L207P	Score=578;Name=lod=297	NA	1p35.1	NA	NA	NA	NA	rs16836099	0.09	0.09	0.101	0.107428	0.002	NA	0.0389	0.385	NA	0.0013	NA	0.05	0.34	0.0327	0.34	1	T	0.0	B	0.0	B	0.000	N	0.000	P	-1.815	N	0.03	T	-1.012	T	0.000	T	0.093	-0.521	1.622	5.27	1.217	2.194	9.555	-0.521336	NA	0.28	0.001977	0.333409	NA	0.138	NA	11.2966564
522	8	8999039	8999039	G	T	exonic	PPP1R3B	NA	nonsynonymous SNV	PPP1R3B:NM_001201329:exon2:c.C123A:p.S41R,PPP1R3B:NM_024607:exon2:c.C123A:p.S41R	exonic	ENSG00000173281	NA	nonsynonymous SNV	ENSG00000173281:ENST00000310455:exon2:c.C123A:p.S41R,ENSG00000173281:ENST00000519699:exon2:c.C123A:p.S41R	Score=426;Name=lod=72	NA	8p23.1	NA	NA	NA	NA	rs61756425	0.02	0.02	0.019	0.0233626	0.007	0.0595	0.013	NA	0.0419	0.01	0.06	0.02	NA	0.0173	0.06	0.72	T	0.001	B	0.001	B	0.588	N	1.000	N	0.805	L	0.93	T	-1.060	T	0.010	T	0.046	2.594	14.64	3.94	1.425	2.459	9.210	2.594345	2.594345	0.21	0.013721	0.002497	NA	0.036	NA	11.2953124
523	1	38184382	38184382	C	T	exonic	EPHA10	NA	nonsynonymous SNV	EPHA10:NM_001099439:exon16:c.G2863A:p.A955T	exonic	ENSG00000183317	NA	nonsynonymous SNV	ENSG00000183317:ENST00000330210:exon12:c.G1348A:p.A450T,ENSG00000183317:ENST00000373048:exon16:c.G2863A:p.A955T,ENSG00000183317:ENST00000427468:exon16:c.G2863A:p.A955T	NA	NA	1p34.3	NA	NA	NA	NA	rs11583463	0.0046	0.0046	NA	0.00319489	0.0089	NA	0.0029	0.0008	0.0041	0.01	NA	0.0028	0.002	0.0118	0.019	1	T	0.0	B	0.001	B	0.836	N	0.931	D	-0.07	N	3.28	T	-0.946	T	0.004	T	0.061	-1.374	0.026	-8.76	-2.307	-1.739	8.703	-1.374266	NA	0.69	0.019111	0.003202	NA	NA	NA	11.2935224
523	11	86666031	86666031	G	A	exonic	FZD4	NA	nonsynonymous SNV	FZD4:NM_012193:exon1:c.C97T:p.P33S	exonic	ENSG00000174804	NA	nonsynonymous SNV	ENSG00000174804:ENST00000531380:exon1:c.C97T:p.P33S	NA	NA	11q14.2	NA	Name=Egr-1,ZBTB7A_(SC-34508),USF-1,E2F6	Name=42	NA	rs61735304	0.01	0.01	NA	0.0125799	0.0109	0.001	0.0245	0.0015	0.0327	0.01	NA	0.02	0.01	0.0153	0.02	.	.	0.0	B	0.0	B	0.207	N	1.000	N	0.345	N	-1.29	T	-0.977	T	0.137	T	0.067	1.547	11.13	3.34	1.152	0.183	7.955	1.547072	1.547072	0.34	0.016235	0.002516	NA	0.007	NA	11.2908984
523	21	44293744	44293744	C	G	exonic	WDR4	NA	nonsynonymous SNV	WDR4:NM_001260474:exon3:c.G213C:p.K71N,WDR4:NM_018669:exon3:c.G213C:p.K71N,WDR4:NM_033661:exon3:c.G213C:p.K71N	exonic	ENSG00000160193	NA	nonsynonymous SNV	ENSG00000160193:ENST00000330317:exon3:c.G213C:p.K71N,ENSG00000160193:ENST00000398208:exon3:c.G213C:p.K71N	Score=483;Name=lod=123	NA	21q22.3	NA	NA	NA	NA	rs2248490	0.49	0.49	0.521	0.502995	0.5258	0.3363	0.3199	0.7284	0.4765	0.53	0.34	0.37	0.72	0.4968	0.72	0.03	D	0.496	P	0.156	B	0.981	N	0.836	P	1.845	L	1.59	T	-0.914	T	0.000	T	0.122	1.773	11.89	3.52	2.302	1.906	5.791	1.772878	1.772878	0.49	0.520349	0.694734	NA	0.601	NA	11.2903844
523	1	16096934	16096934	C	T	exonic	FBLIM1	NA	nonsynonymous SNV	FBLIM1:NM_001024216:exon2:c.C281T:p.S94F,FBLIM1:NM_001024215:exon5:c.C572T:p.S191F,FBLIM1:NM_017556:exon6:c.C572T:p.S191F	exonic	ENSG00000162458	NA	nonsynonymous SNV	ENSG00000162458:ENST00000332305:exon2:c.C281T:p.S94F,ENSG00000162458:ENST00000400773:exon4:c.C281T:p.S94F,ENSG00000162458:ENST00000502739:exon4:c.C281T:p.S94F,ENSG00000162458:ENST00000441801:exon5:c.C572T:p.S191F,ENSG00000162458:ENST00000375766:exon6:c.C572T:p.S191F,ENSG00000162458:ENST00000375771:exon7:c.C572T:p.S191F	Score=581;Name=lod=305	NA	1p36.21	NA	NA	NA	NA	rs10927851	0.62	0.62	0.592	0.642372	0.6501	0.8284	0.6931	0.3843	0.7556	0.64	0.81	0.61	0.39	0.6816	0.81	0.73	T	0.997	D	0.916	D	0.059	N	0.025	P	1.125	L	0.93	T	-1.081	T	0.000	T	0.335	4.08	21	5.24	2.618	3.566	14.607	4.080246	4.080246	0.04	0.71186	0.430776	NA	0.696	NA	11.2897734
523	5	176308303	176308303	C	T	exonic	HK3	NA	nonsynonymous SNV	HK3:NM_002115:exon18:c.G2627A:p.R876H	exonic	ENSG00000160883	NA	nonsynonymous SNV	ENSG00000160883:ENST00000292432:exon18:c.G2627A:p.R876H	Score=405;Name=lod=59	NA	5q35.2	NA	NA	NA	NA	rs145827614	0.01	0.01	0.012	0.00778754	0.0169	NA	0.0086	0.0008	0.0153	0.02	NA	0.01	NA	0.0146	0.02	.	.	0.0	B	0.0	B	0.015	N	0.987	N	-1.94	N	-4.0	D	-0.496	T	0.312	T	0.098	-0.743	0.838	5.09	0.884	3.248	9.238	-0.742758	NA	1	0.015814	0.003177	NA	NA	NA	11.2860194
524	19	14499616	14499616	C	T	exonic	CD97	NA	nonsynonymous SNV	CD97:NM_001025160:exon3:c.C176T:p.T59M,CD97:NM_001784:exon3:c.C176T:p.T59M,CD97:NM_078481:exon3:c.C176T:p.T59M	exonic	ENSG00000123146	NA	nonsynonymous SNV	ENSG00000123146:ENST00000586517:exon2:c.C125T:p.T42M,ENSG00000123146:ENST00000242786:exon3:c.C176T:p.T59M,ENSG00000123146:ENST00000357355:exon3:c.C176T:p.T59M,ENSG00000123146:ENST00000358600:exon3:c.C176T:p.T59M,ENSG00000123146:ENST00000587606:exon3:c.C176T:p.T59M,ENSG00000123146:ENST00000591080:exon3:c.C176T:p.T59M,ENSG00000123146:ENST00000592261:exon3:c.C176T:p.T59M	NA	NA	19p13.12	NA	NA	NA	NA	rs139113505	0.04	0.04	0.003	0.0393371	0.0258	0.0188	0.1023	0.0416	0.0266	0.02	0.02	0.09	0.05	0.0246	0.09	0.23	T	0.987	D	0.391	B	.	.	1.000	N	1.5	L	-0.22	T	-1.041	T	0.010	T	0.088	0.944	8.85	-6.22	-2.299	-3.944	3.178	0.944315	NA	0.19	NA	NA	NA	0.007	NA	11.2829334
524	19	9968434	9968434	C	T	exonic	OLFM2	NA	nonsynonymous SNV	OLFM2:NM_058164:exon3:c.G317A:p.R106Q	exonic	ENSG00000105088	NA	nonsynonymous SNV	ENSG00000105088:ENST00000590841:exon2:c.G83A:p.R28Q,ENSG00000105088:ENST00000592448:exon2:c.G83A:p.R28Q,ENSG00000105088:ENST00000264833:exon3:c.G317A:p.R106Q,ENSG00000105088:ENST00000593091:exon3:c.G389A:p.R130Q	Score=336;Name=lod=31	NA	19p13.2	NA	NA	NA	NA	rs2303100	0.37	0.37	0.327	0.310503	0.5427	0.3095	0.5403	0.0401	0.2751	0.55	0.31	0.54	0.05	0.4593	0.55	.	.	0.942	P	0.329	B	0.000	D	0.906	P	1.1	L	0.88	T	-0.901	T	0.000	T	0.121	2.904	15.68	3.92	2.025	1.246	7.327	2.90424	2.90424	0.03	0.548605	0.128007	NA	0.319	NA	11.2827284
524	1	52854961	52854961	G	A	exonic	ORC1	NA	nonsynonymous SNV	ORC1:NM_001190818:exon7:c.C1115T:p.A372V,ORC1:NM_001190819:exon7:c.C1115T:p.A372V,ORC1:NM_004153:exon7:c.C1115T:p.A372V	exonic	ENSG00000085840	NA	nonsynonymous SNV	ENSG00000085840:ENST00000371566:exon7:c.C1115T:p.A372V,ENSG00000085840:ENST00000371568:exon7:c.C1115T:p.A372V	NA	NA	1p32.3	NA	NA	NA	NA	rs3087476	0.01	0.01	0.009	0.00798722	0.0169	NA	0.0274	0.0008	0.0031	0.02	NA	0.02	NA	0.0149	0.022	0.55	T	0.262	B	0.015	B	0.783	N	1.000	N	1.7	L	0.99	T	-1.052	T	0.044	T	0.012	0.154	4.83	3.18	1.325	2.075	7.872	0.154299	NA	0.19	0.021744	0.004766	NA	0.007	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117871.2;CLNDSDB=.;CLNDSDBID=.	11.2797894
524	11	95564259	95564259	A	G	exonic	CEP57	NA	nonsynonymous SNV	CEP57:NM_001243777:exon10:c.A1264G:p.R422G,CEP57:NM_014679:exon11:c.A1342G:p.R448G,CEP57:NM_001243776:exon12:c.A1315G:p.R439G	exonic	ENSG00000166037	NA	nonsynonymous SNV	ENSG00000166037:ENST00000325486:exon10:c.A1264G:p.R422G,ENSG00000166037:ENST00000325542:exon11:c.A1342G:p.R448G,ENSG00000166037:ENST00000537677:exon11:c.A1261G:p.R421G,ENSG00000166037:ENST00000541150:exon11:c.A1315G:p.R439G	Score=383;Name=lod=48	NA	11q21	NA	NA	NA	NA	rs644799	0.27	0.27	0.277	0.205871	0.3738	0.253	0.2363	0.0772	0.137	0.37	0.28	0.28	0.09	0.2976	0.38	0	D	0.0	B	0.0	B	0.096	N	0.000	P	-0.95	N	1.55	T	-0.980	T	0.000	T	0.304	0.098	4.527	4.92	1.511	1.006	6.424	0.097865	NA	0.64	0.382271	0.124035	ID=COSM1357997;OCCURENCE=1(large_intestine)	0.246	NA	11.2796624
524	1	53553754	53553754	T	C	exonic	SLC1A7	NA	nonsynonymous SNV	SLC1A7:NM_006671:exon11:c.A1610G:p.Q537R	exonic	ENSG00000162383	NA	nonsynonymous SNV	ENSG00000162383:ENST00000371494:exon11:c.A1610G:p.Q537R	Score=445;Name=lod=86	NA	1p32.3	NA	Name=Rad21,CTCF	Name=6	NA	rs1288401	0.46	0.46	0.414	0.410144	0.7336	0.2966	0.4798	0.1498	0.4969	0.74	0.28	0.54	0.16	0.5929	0.74	0.4	T	0.0	B	0.0	B	0.001	N	0.000	P	0.46	N	0.79	T	-1.000	T	0.000	T	0.127	1.897	12.3	5.76	2.186	4.223	16.092	1.89696	1.89696	0.43	0.728721	0.261916	ID=COSM146516;OCCURENCE=1(stomach)	0.507	NA	11.2781124
524	10	105824333	105824333	G	A	exonic	COL17A1	NA	nonsynonymous SNV	COL17A1:NM_000494:exon10:c.C629T:p.T210M	exonic	ENSG00000065618	NA	nonsynonymous SNV	ENSG00000065618:ENST00000353479:exon10:c.C629T:p.T210M,ENSG00000065618:ENST00000369733:exon10:c.C629T:p.T210M,ENSG00000065618:ENST00000393211:exon10:c.C629T:p.T210M	NA	NA	10q25.1	NA	NA	NA	NA	rs805708	0.6	0.6	0.56	0.564896	0.6799	0.6746	0.7061	0.2814	0.6166	0.68	0.71	0.71	0.27	0.6739	0.71	0.12	T	1.0	D	0.947	D	0.006	N	0.340	P	1.995	M	0.46	T	-0.910	T	0.000	T	0.489	3.586	18.27	5.57	2.627	6.834	19.139	3.586094	3.586094	0.1	0.703023	0.35497	NA	0.623	NA	11.2765104
525	16	74729219	74729219	C	T	exonic	MLKL	NA	nonsynonymous SNV	MLKL:NM_001142497:exon2:c.G437A:p.R146Q,MLKL:NM_152649:exon2:c.G437A:p.R146Q	exonic	ENSG00000168404	NA	nonsynonymous SNV	ENSG00000168404:ENST00000306247:exon2:c.G437A:p.R146Q,ENSG00000168404:ENST00000308807:exon2:c.G437A:p.R146Q,ENSG00000168404:ENST00000573267:exon3:c.G437A:p.R146Q	NA	NA	16q23.1	NA	NA	Name=3	NA	rs34515646	0.01	0.01	0.01	0.00519169	0.0179	NA	0.0058	0.0015	0.002	0.02	NA	0.01	0.002	0.0159	0.025	0.36	T	0.229	B	0.009	B	0.054	N	1.000	N	0	N	2.75	T	-0.966	T	0.092	T	0.26	0.79	8.163	-8.08	-1.323	-1.701	7.787	0.789953	NA	0.31	0.024767	0.005914	NA	0.007	NA	11.2747664
525	6	29910761	29910761	G	A	exonic	HLA-A	NA	nonsynonymous SNV	HLA-A:NM_001242758:exon2:c.G301A:p.D101N,HLA-A:NM_002116:exon2:c.G301A:p.D101N	exonic	ENSG00000206503	NA	nonsynonymous SNV	ENSG00000206503:ENST00000376802:exon2:c.G301A:p.D101N,ENSG00000206503:ENST00000376806:exon2:c.G301A:p.D101N,ENSG00000206503:ENST00000376809:exon2:c.G301A:p.D101N,ENSG00000206503:ENST00000396634:exon4:c.G301A:p.D101N	NA	NA	6p22.1	NA	Name=Pol2-4H8,CTCF	Name=11	NA	rs1136688	0.29	0.29	0.192	0.384984	0.3936	0.3115	0.3963	0.3812	0.4489	0.31	0.22	0.35	0.29	0.3543	0.35	0.83	T	0.0	B	0.007	B	0.102	N	1.000	P	-1.27	N	5.86	T	-0.939	T	0.000	T	0.111	0.519	6.812	-7.15	-3.195	-5.635	9.805	0.518999	NA	1	0.313725	0.268459	NA	NA	NA	11.2717084
525	3	73114003	73114003	T	C	exonic	PPP4R2	NA	synonymous SNV	PPP4R2:NM_174907:exon8:c.T639C:p.S213S	exonic	ENSG00000163605	NA	synonymous SNV	ENSG00000163605:ENST00000394284:exon7:c.T468C:p.S156S,ENSG00000163605:ENST00000488810:exon7:c.T564C:p.S188S,ENSG00000163605:ENST00000295862:exon8:c.T471C:p.S157S,ENSG00000163605:ENST00000356692:exon8:c.T639C:p.S213S	Score=409;Name=lod=61	NA	3p13	NA	NA	Name=2	NA	rs61188513	0.19	0.19	0.203	0.215655	0.1203	0.3542	0.0937	0.1483	0.3487	0.12	0.37	0.1	0.15	0.1681	0.37	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.084	T	0.000	T	.	2.051	12.81	5.56	2.237	3.746	16.005	2.050878	2.050878	NA	0.106834	0.127679	NA	0.13	NA	11.2714326
525	21	46011468	46011468	G	A	exonic	KRTAP10-6	NA	nonsynonymous SNV	KRTAP10-6:NM_198688:exon1:c.C898T:p.P300S	exonic	ENSG00000188155	NA	nonsynonymous SNV	ENSG00000188155:ENST00000400368:exon1:c.C898T:p.P300S	Score=417;Name=lod=66	NA	21q22.3	NA	NA	NA	NA	rs465279	0.53	0.53	0.5	0.501997	0.7286	0.4435	0.6311	0.236	0.5971	0.71	0.47	0.65	0.23	0.6373	0.71	0.02	D	1.0	D	1.0	D	.	.	0.000	P	1.795	L	4.58	T	-1.146	T	0.000	T	0.15	1.801	11.98	2.7	1.520	.	11.167	1.800987	1.800987	0.01	0.697347	0.299591	NA	0.072	NA	11.2700864
525	2	73491644	73491644	C	T	exonic	FBXO41	NA	nonsynonymous SNV	FBXO41:NM_001080410:exon5:c.G1568A:p.R523H	exonic	ENSG00000163013	NA	nonsynonymous SNV	ENSG00000163013:ENST00000295133:exon6:c.G1751A:p.R584H,ENSG00000163013:ENST00000520530:exon6:c.G1568A:p.R523H,ENSG00000163013:ENST00000521871:exon6:c.G1568A:p.R523H	Score=361;Name=lod=39	NA	2p13.2	NA	NA	NA	NA	rs61733550	0.02	0.02	0.023	0.0199681	0.0268	NA	0.013	0.0484	NA	0.03	NA	0.02	0.04	0.0178	0.044	0.25	T	0.008	B	0.002	B	0.000	N	1.000	D	1.59	L	.	.	-1.060	T	0.040	T	0.146	2.275	13.56	3.41	0.735	3.783	7.918	2.27477	2.27477	0.13	0.018943	0.044012	NA	0.022	NA	11.2697904
525	1	152083325	152083325	A	T	exonic	TCHH	NA	nonsynonymous SNV	TCHH:NM_007113:exon3:c.T2368A:p.L790M	exonic	ENSG00000159450	NA	nonsynonymous SNV	ENSG00000159450:ENST00000368804:exon2:c.T2368A:p.L790M	NA	Name=Hair morphology	1q21.3	NA	Name=CTCF,ZNF263,Pol2	Name=72	NA	rs11803731	0.1	0.1	0.088	0.0726837	0.2286	0.001	0.0937	0.0045	0.0634	0.22	0.0017	0.14	0.01	0.1571	0.22	0.08	T	0.989	D	0.737	P	.	.	1.000	P	0.695	N	3.1	T	-0.978	T	0.009	T	0.101	-0.863	0.52	-0.583	0.140	-0.142	1.528	-0.862595	NA	NA	0.178324	0.03598	NA	0.094	NA	11.2693094
525	1	114394689	114394689	C	T	exonic	PTPN22	NA	nonsynonymous SNV	PTPN22:NM_001193431:exon10:c.G788A:p.R263Q,PTPN22:NM_015967:exon10:c.G788A:p.R263Q	exonic	ENSG00000134242	NA	nonsynonymous SNV	ENSG00000134242:ENST00000525799:exon5:c.G407A:p.R136Q,ENSG00000134242:ENST00000538253:exon6:c.G56A:p.R19Q,ENSG00000134242:ENST00000359785:exon10:c.G788A:p.R263Q,ENSG00000134242:ENST00000420377:exon10:c.G788A:p.R263Q	Score=601;Name=lod=368	NA	1p13.2	NA	NA	NA	NA	rs33996649	0.01	0.01	0.012	0.0109824	0.0258	NA	0.0202	0.0023	0.0123	0.02	NA	0.02	0.002	0.0175	0.021	1	T	0.011	B	0.001	B	0.001	N	1.000	N	-0.785	N	-1.69	D	-0.969	T	0.080	T	0.099	0.524	6.84	3.43	0.460	3.684	13.045	0.524195	NA	1	0.021047	0.006355	NA	0.007	NA	11.2689864
525	9	35674053	35674053	G	A	exonic	CA9	NA	nonsynonymous SNV	CA9:NM_001216:exon1:c.G97A:p.V33M	exonic	ENSG00000107159	NA	nonsynonymous SNV	ENSG00000107159:ENST00000378357:exon1:c.G97A:p.V33M	Score=358;Name=lod=38	NA	9p13.3	NA	Name=Pol2,AP-2alpha,Ini1	NA	NA	rs2071676	0.32	0.32	0.284	0.323283	0.3569	0.4444	0.4078	0.0764	0.4376	0.34	0.46	0.37	0.11	0.3619	0.46	0	D	0.815	P	0.515	P	0.405	N	0.000	P	1.04	L	-0.66	T	-1.020	T	0.000	T	0.074	1.689	11.61	3.11	0.654	0.359	8.009	1.688594	1.688594	0	0.348023	0.11507	NA	0.246	NA	11.2665104
525	19	45854919	45854919	T	G	exonic	ERCC2	NA	nonsynonymous SNV	ERCC2:NM_000400:exon23:c.A2251C:p.K751Q	exonic	ENSG00000104884	NA	nonsynonymous SNV	ENSG00000104884:ENST00000391944:exon21:c.A2017C:p.K673Q,ENSG00000104884:ENST00000391945:exon23:c.A2251C:p.K751Q	Score=422;Name=lod=69	Name=Lung Cancer (DNA repair capacity)	19q13.32	NA	NA	NA	NA	rs13181	0.24	0.24	0.234	0.236621	0.3638	0.0764	0.2147	0.1921	0.3466	0.38	0.09	0.21	0.21	0.3308	0.38	0.89	T	0.0	B	0.001	B	0.200	N	0.000	P	0.62	N	-1.42	T	-1.087	T	0.000	T	0.075	-0.624	1.232	4.29	1.046	1.198	11.392	-0.623727	NA	0.71	0.372442	0.235361	NA	0.268	NA	11.2662914
525	2	125660609	125660609	C	T	exonic	CNTNAP5	NA	nonsynonymous SNV	CNTNAP5:NM_130773:exon22:c.C3584T:p.T1195M	exonic	ENSG00000155052	NA	nonsynonymous SNV	ENSG00000155052:ENST00000431078:exon22:c.C3584T:p.T1195M	NA	NA	2q14.3	NA	NA	NA	NA	rs34165507	0.01	0.01	0.009	0.0081869	0.0219	NA	0.0115	0.0015	0.0092	0.02	NA	0.01	0.002	0.0214	0.024	0.09	T	0.005	B	0.002	B	0.148	N	1.000	N	2.125	M	-2.38	D	-0.597	T	0.362	T	0.036	0.166	4.895	-5.46	-1.309	-0.082	8.671	0.166325	NA	0.07	0.024341	0.005176	NA	NA	NA	11.2656924
526	20	34022387	34022387	A	C	exonic	GDF5	NA	nonsynonymous SNV	GDF5:NM_000557:exon2:c.T826G:p.S276A	exonic	ENSG00000125965,ENSG00000204183	NA	nonsynonymous SNV	ENSG00000125965:ENST00000374369:exon2:c.T826G:p.S276A,ENSG00000204183:ENST00000374375:exon2:c.A431C:p.E144A,ENSG00000125965:ENST00000374372:exon4:c.T826G:p.S276A	Score=549;Name=lod=228	NA	20q11.22	NA	NA	Name=29	NA	rs224331	0.34	0.34	0.294	0.383986	0.3539	0.2857	0.2608	0.466	0.4928	0.36	0.24	0.29	0.45	0.3701	0.45	0.73	T	0.0	B	0.001	B	0.037	N	1.000	P	-0.69	N	-0.1	T	-0.939	T	0.000	T	0.141	0.786	8.146	3.54	1.145	1.594	1.889	0.786387	NA	0.31	0.345955	0.414736	ID=COSM1483572,COSM443713,COSM1483571;OCCURENCE=1(breast)	0.355	NA	11.2633784
526	8	125568623	125568623	A	G	exonic	MTSS1	NA	synonymous SNV	MTSS1:NM_014751:exon12:c.T1254C:p.Y418Y	exonic	ENSG00000170873	NA	synonymous SNV	ENSG00000170873:ENST00000395508:exon5:c.T576C:p.Y192Y,ENSG00000170873:ENST00000524090:exon6:c.T924C:p.Y308Y,ENSG00000170873:ENST00000378017:exon12:c.T1179C:p.Y393Y,ENSG00000170873:ENST00000518547:exon12:c.T1254C:p.Y418Y,ENSG00000170873:ENST00000325064:exon13:c.T1266C:p.Y422Y	Score=450;Name=lod=90	NA	8q24.13	Score=810;Name=V$ER_Q6	NA	NA	NA	rs3829036	0.17	0.17	0.154	0.138578	0.1431	0.1399	0.219	0.1626	0.0429	0.15	0.16	0.22	0.19	0.1331	0.22	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	1.311	10.3	-7.28	-1.551	-1.462	15.875	1.311018	1.311018	NA	0.128635	0.146391	NA	0.116	NA	11.2618316
526	18	56204932	56204932	T	G	exonic	ALPK2	NA	nonsynonymous SNV	ALPK2:NM_052947:exon5:c.A2487C:p.K829N	exonic	ENSG00000198796	NA	nonsynonymous SNV	ENSG00000198796:ENST00000361673:exon5:c.A2487C:p.K829N	NA	NA	18q21.32	NA	Name=Pol2-4H8	NA	NA	rs3809973	0.44	0.44	0.439	0.404353	0.5726	0.2361	0.4294	0.4319	0.3497	0.59	0.24	0.51	0.38	0.4688	0.59	0.06	T	0.995	D	0.891	P	0.705	N	1.000	P	1.7	L	0.73	T	-0.940	T	0.000	T	0.02	2.163	13.19	4.36	2.126	1.866	10.192	2.163361	2.163361	0	0.533488	0.450295	NA	0.522	NA	11.2584454
526	19	57863052	57863052	T	C	exonic	ZNF304	NA	nonsynonymous SNV	ZNF304:NM_020657:exon1:c.T20C:p.M7T	exonic	ENSG00000131845	NA	nonsynonymous SNV	ENSG00000131845:ENST00000282286:exon1:c.T20C:p.M7T,ENSG00000131845:ENST00000443917:exon1:c.T20C:p.M7T,ENSG00000131845:ENST00000391705:exon2:c.T20C:p.M7T	NA	NA	19q13.43	NA	NA	Name=4	NA	rs117111481	0.01	0.01	0.007	0.00738818	0.0308	NA	0.0072	0.0008	NA	0.03	NA	0.01	NA	0.02	0.03	0.87	T	0.0	B	0.0	B	.	.	1.000	N	0.97	L	3.35	T	-0.911	T	0.004	T	0.053	-2.125	0.005	-4.43	-1.491	-1.136	10.856	-2.12545	NA	0.47	0.026279	0.003631	NA	0.014	NA	11.2562544
526	15	49148192	49148192	T	G	exonic	SHC4	NA	nonsynonymous SNV	SHC4:NM_203349:exon8:c.A1200C:p.Q400H	exonic	ENSG00000185634	NA	nonsynonymous SNV	ENSG00000185634:ENST00000396535:exon5:c.A471C:p.Q157H,ENSG00000185634:ENST00000557797:exon5:c.A342C:p.Q114H,ENSG00000185634:ENST00000558220:exon5:c.A342C:p.Q114H,ENSG00000185634:ENST00000537958:exon6:c.A342C:p.Q114H,ENSG00000185634:ENST00000332408:exon8:c.A1200C:p.Q400H	Score=497;Name=lod=139	NA	15q21.1	NA	Name=CTCF_(C-20),HNF4A_(H-171),RXRA,CTCF,HNF4G_(SC-6558),Rad21,SMC3_(ab9263),HNF4A	Name=121	NA	rs16961728	0.04	0.04	0.032	0.0291534	0.0288	0.0823	0.0101	0.003	0.0235	0.03	0.09	0.01	0.0041	0.0295	0.09	0.12	T	0.019	B	0.038	B	0.637	N	0.699	D	1.15	L	3.45	T	-1.039	T	0.003	T	0.132	1.559	11.17	-0.005	-0.162	0.087	4.593	1.559255	1.559255	0.11	0.019329	0.004096	ID=COSM1178436;OCCURENCE=1(prostate)	0.007	NA	11.2557044
527	11	7091569	7091569	C	T	exonic	NLRP14	NA	nonsynonymous SNV	NLRP14:NM_176822:exon11:c.C3028T:p.L1010F	exonic	ENSG00000158077	NA	nonsynonymous SNV	ENSG00000158077:ENST00000299481:exon11:c.C3028T:p.L1010F	NA	NA	11p15.4	NA	NA	NA	NA	rs17280682	0.11	0.11	0.104	0.0960463	0.2147	0.0169	0.1297	0.0666	0.0716	0.21	0.02	0.13	0.05	0.1495	0.22	0.08	T	0.706	P	0.433	B	0.002	N	0.999	P	2.28	M	0.07	T	-1.077	T	0.000	T	0.193	2.575	14.57	4.13	2.602	2.377	12.195	2.575489	2.575489	0	0.215084	0.083598	NA	0.13	NA	11.2540494
527	10	17156151	17156151	A	G	exonic	CUBN	NA	nonsynonymous SNV	CUBN:NM_001081:exon8:c.T758C:p.F253S	exonic	ENSG00000107611	NA	nonsynonymous SNV	ENSG00000107611:ENST00000377833:exon8:c.T758C:p.F253S	NA	Name=Folate pathway vitamin levels	10p13	NA	Name=NRSF	Name=79	NA	rs1801222	0.77	0.77	0.77	0.799321	0.7107	0.8472	0.7997	0.8056	0.8323	0.7	0.82	0.8	0.78	0.7278	0.82	0.92	T	0.0	B	0.0	B	0.497	N	0.999	P	-1.7	N	-2.24	D	-0.951	T	0.000	T	0.055	-0.296	2.587	2.53	0.346	3.219	9.400	-0.296087	NA	0.83	0.646628	0.799591	NA	0.761	NA	11.2482054
527	12	8329700	8329700	A	C	exonic	ZNF705A	NA	nonsynonymous SNV	ZNF705A:NM_001004328:exon5:c.A424C:p.K142Q	exonic	ENSG00000196946	NA	nonsynonymous SNV	ENSG00000196946:ENST00000359286:exon5:c.A424C:p.K142Q,ENSG00000196946:ENST00000396570:exon6:c.A424C:p.K142Q	Score=329;Name=lod=29	NA	12p13.31	NA	NA	NA	NA	rs10743253	0.47	0.47	0.424	0.429712	0.5616	0.5198	0.4683	0.2882	0.365	0.55	0.52	0.47	0.28	0.4837	0.55	0	D	0.981	D	0.854	P	.	.	0.997	P	2.955	M	4.36	T	-0.959	T	0.000	T	0.097	3.111	16.4	1.35	0.891	3.275	6.812	3.111296	3.111296	0.02	0.541744	0.315479	ID=COSM147416;OCCURENCE=1(stomach)	NA	NA	11.2462894
527	1	43232504	43232504	C	A	exonic	LEPRE1	NA	nonsynonymous SNV	LEPRE1:NM_001146289:exon1:c.G139T:p.A47S,LEPRE1:NM_001243246:exon1:c.G139T:p.A47S,LEPRE1:NM_022356:exon1:c.G139T:p.A47S	exonic	ENSG00000117385	NA	nonsynonymous SNV	ENSG00000117385:ENST00000236040:exon1:c.G139T:p.A47S,ENSG00000117385:ENST00000296388:exon1:c.G139T:p.A47S,ENSG00000117385:ENST00000372526:exon1:c.G139T:p.A47S,ENSG00000117385:ENST00000397054:exon1:c.G139T:p.A47S	Score=629;Name=lod=480	NA	1p34.2	NA	Name=ZBTB7A_(SC-34508),NFKB,ETS1,TAF1,Pol2,YY1,Pol2(phosphoS2),Sin3Ak-20,YY1_(C-20),HA-E2F1,Pol2-4H8,ZNF263	NA	NA	rs55716016	0.03	0.03	0.026	0.0397364	0.0258	0.001	0.0216	0.0794	0.0532	0.03	NA	0.03	0.06	0.0327	0.068	0.4	T	0.047	B	0.02	B	0.023	N	0.983	N	-0.05	N	1.22	T	-1.056	T	0.004	T	0.164	2.105	13	3.23	0.940	2.122	9.280	2.105025	2.105025	0.37	0.029721	0.067614	NA	NA	NA	11.2451124
528	2	69650730	69650730	G	A	exonic	NFU1	NA	nonsynonymous SNV	NFU1:NM_001002755:exon3:c.C286T:p.R96C,NFU1:NM_015700:exon3:c.C214T:p.R72C	exonic	ENSG00000169599	NA	nonsynonymous SNV	ENSG00000169599:ENST00000303698:exon3:c.C214T:p.R72C,ENSG00000169599:ENST00000410022:exon3:c.C286T:p.R96C	Score=522;Name=lod=177	NA	2p13.3	NA	NA	NA	NA	rs74637005	0.02	0.02	0.011	0.0123802	0.0358	NA	0.0245	0.0015	0.0072	0.03	NA	0.03	NA	0.0199	0.037	0.08	T	0.012	B	0.006	B	0.000	N	1.000	D	-0.905	N	-0.08	T	-1.109	T	0.020	T	0.089	1.774	11.89	3.6	0.628	4.488	6.907	1.774476	1.774476	0.06	0.037326	0.009079	NA	0.007	NA	11.2403074
528	6	29911114	29911114	G	A	exonic	HLA-A	NA	nonsynonymous SNV	HLA-A:NM_001242758:exon3:c.G413A:p.R138Q,HLA-A:NM_002116:exon3:c.G413A:p.R138Q	exonic	ENSG00000206503	NA	nonsynonymous SNV	ENSG00000206503:ENST00000376802:exon3:c.G413A:p.R138Q,ENSG00000206503:ENST00000376806:exon3:c.G413A:p.R138Q,ENSG00000206503:ENST00000376809:exon3:c.G413A:p.R138Q,ENSG00000206503:ENST00000396634:exon5:c.G413A:p.R138Q	NA	NA	6p22.1	NA	Name=Pol2-4H8	Name=10	NA	rs3173420	0.64	0.64	0.562	0.64976	0.5895	0.6766	0.7003	0.7352	0.5327	0.53	0.71	0.66	0.7	0.5447	0.71	0.26	T	0.892	P	0.276	B	0.000	U	1.000	P	0.935	L	9.43	T	-0.921	T	0.000	T	0.079	0.292	5.582	-7.13	-2.037	-10.234	8.128	0.292193	NA	0.26	0.463093	0.579018	NA	0.101	NA	11.2360404
528	16	84476200	84476200	A	T	exonic	ATP2C2	NA	nonsynonymous SNV	ATP2C2:NM_014861:exon15:c.A1396T:p.M466L	exonic	ENSG00000064270	NA	nonsynonymous SNV	ENSG00000064270:ENST00000262429:exon15:c.A1396T:p.M466L,ENSG00000064270:ENST00000416219:exon15:c.A1396T:p.M466L	Score=469;Name=lod=107	NA	16q24.1	NA	NA	NA	NA	rs247897	0.4	0.4	0.391	0.408147	0.3499	0.4226	0.3401	0.4713	0.4162	0.35	0.41	0.36	0.51	0.3729	0.51	0.34	T	0.193	B	0.147	B	0.000	D	0.002	P	0.105	N	-3.68	D	-1.002	T	0.000	T	0.137	1.447	10.78	3.8	0.794	6.632	11.172	1.446866	1.446866	0.27	0.375122	0.421081	NA	0.37	NA	11.2354114
529	1	153390626	153390626	G	A	exonic	S100A7A	NA	nonsynonymous SNV	S100A7A:NM_176823:exon2:c.G68A:p.R23H	exonic	ENSG00000184330	NA	nonsynonymous SNV	ENSG00000184330:ENST00000329256:exon1:c.G68A:p.R23H,ENSG00000184330:ENST00000368728:exon2:c.G68A:p.R23H,ENSG00000184330:ENST00000368729:exon2:c.G68A:p.R23H	NA	NA	1q21.3	NA	NA	NA	NA	rs55985140	0.01	0.01	0.008	0.0105831	0.0348	NA	0.0144	0.0015	0.0061	0.03	NA	0.01	NA	0.0278	0.036	0.21	T	0.002	B	0.0	B	.	.	1.000	N	1.965	M	2.82	T	-0.980	T	0.008	T	0.037	-0.974	0.3	-4.92	-2.016	-2.796	5.587	-0.974224	NA	0.16	0.036512	0.005901	NA	0.058	NA	11.2342214
529	14	39818145	39818145	G	A	exonic	CTAGE5	NA	nonsynonymous SNV	CTAGE5:NM_001247988:exon22:c.G1996A:p.G666R,CTAGE5:NM_203355:exon22:c.G2083A:p.G695R,CTAGE5:NM_001247989:exon23:c.G2227A:p.G743R,CTAGE5:NM_001247990:exon23:c.G1987A:p.G663R,CTAGE5:NM_005930:exon23:c.G2212A:p.G738R,CTAGE5:NM_203354:exon23:c.G2176A:p.G726R,CTAGE5:NM_203356:exon23:c.G2125A:p.G709R	exonic	ENSG00000150527,ENSG00000258941	NA	nonsynonymous SNV	ENSG00000150527:ENST00000348007:exon22:c.G2083A:p.G695R,ENSG00000150527:ENST00000553352:exon22:c.G2125A:p.G709R,ENSG00000150527:ENST00000557038:exon22:c.G1972A:p.G658R,ENSG00000150527:ENST00000280083:exon23:c.G2212A:p.G738R,ENSG00000150527:ENST00000341502:exon23:c.G2212A:p.G738R,ENSG00000150527:ENST00000341749:exon23:c.G2176A:p.G726R,ENSG00000150527:ENST00000396158:exon23:c.G2227A:p.G743R,ENSG00000150527:ENST00000396165:exon23:c.G2125A:p.G709R,ENSG00000150527:ENST00000556148:exon23:c.G1987A:p.G663R,ENSG00000258941:ENST00000603904:exon23:c.G2125A:p.G709R,ENSG00000258941:ENST00000553728:exon27:c.G3817A:p.G1273R	Score=399;Name=lod=56	NA	14q21.1	Score=931;Name=V$NFKB_C	Name=NFKB	NA	NA	rs1060878	0.29	0.29	0.263	0.310703	0.3837	0.1587	0.2839	0.2973	0.4294	0.38	0.17	0.28	0.32	0.3511	0.39	.	.	0.0	B	0.001	B	0.003	N	1.000	P	-2.56	N	1.91	T	-0.949	T	0.000	T	0.155	-0.907	0.424	3.81	0.329	1.555	4.512	-0.907019	NA	1	0.369039	0.315168	NA	0.478	NA	11.2294944
529	2	182780307	182780307	G	A	exonic	SSFA2	NA	nonsynonymous SNV	SSFA2:NM_001130445:exon11:c.G1940A:p.G647D,SSFA2:NM_006751:exon11:c.G1940A:p.G647D	exonic	ENSG00000138434	NA	nonsynonymous SNV	ENSG00000138434:ENST00000409136:exon3:c.G467A:p.G156D,ENSG00000138434:ENST00000428267:exon10:c.G1481A:p.G494D,ENSG00000138434:ENST00000320370:exon11:c.G1940A:p.G647D,ENSG00000138434:ENST00000409001:exon11:c.G1940A:p.G647D,ENSG00000138434:ENST00000431877:exon11:c.G1940A:p.G647D	Score=393;Name=lod=53	NA	2q31.3	Score=705;Name=V$HOX13_01	NA	NA	NA	rs75716247	0.07	0.07	0.074	0.0844649	0.0348	0.0843	0.0403	0.1241	0.1135	0.03	0.11	0.04	0.12	0.0486	0.12	1	T	0.0	B	0.0	B	0.004	N	1.000	P	-2.125	N	3.05	T	-0.993	T	0.000	T	0.054	-0.017	3.925	5.56	0.948	3.857	11.349	-0.017296	NA	1	0.023721	0.11961	NA	0.065	NA	11.2262124
529	11	60776103	60776103	T	C	exonic	CD6	NA	synonymous SNV	CD6:NM_001254750:exon4:c.T567C:p.T189T,CD6:NM_001254751:exon4:c.T567C:p.T189T,CD6:NM_006725:exon4:c.T567C:p.T189T	exonic	ENSG00000013725	NA	synonymous SNV	ENSG00000013725:ENST00000313421:exon4:c.T567C:p.T189T,ENSG00000013725:ENST00000344028:exon4:c.T567C:p.T189T,ENSG00000013725:ENST00000344931:exon4:c.T567C:p.T189T,ENSG00000013725:ENST00000346437:exon4:c.T567C:p.T189T,ENSG00000013725:ENST00000352009:exon4:c.T567C:p.T189T,ENSG00000013725:ENST00000433107:exon4:c.T567C:p.T189T,ENSG00000013725:ENST00000452451:exon4:c.T567C:p.T189T,ENSG00000013725:ENST00000542157:exon4:c.T567C:p.T189T	NA	NA	11q12.2	Score=942;Name=V$NMYC_01	Name=USF-1	NA	NA	rs61899223	0.13	0.13	0.126	0.158746	0.1382	0.0764	0.1081	0.2693	0.1513	0.12	0.06	0.12	0.23	0.1682	0.25	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.045	T	0.000	T	.	-0.669	1.073	-8.0	-2.159	-0.993	6.244	-0.669235	NA	NA	0.134217	0.248067	NA	0.123	NA	11.2260496
530	14	64520020	64520020	A	G	exonic	SYNE2	NA	nonsynonymous SNV	SYNE2:NM_015180:exon48:c.A9389G:p.N3130S,SYNE2:NM_182914:exon48:c.A9389G:p.N3130S	exonic	ENSG00000054654	NA	nonsynonymous SNV	ENSG00000054654:ENST00000344113:exon48:c.A9389G:p.N3130S,ENSG00000054654:ENST00000358025:exon48:c.A9389G:p.N3130S,ENSG00000054654:ENST00000554584:exon48:c.A9488G:p.N3163S	NA	NA	14q23.2	NA	Name=c-Fos	Name=8	NA	rs11847087	0.06	0.06	0.064	0.0609026	0.0258	NA	0.0303	0.1884	0.0092	0.03	NA	0.04	0.18	0.042	0.18	0.41	T	0.021	B	0.008	B	0.343	N	1.000	P	0.895	L	0.85	T	-1.061	T	0.000	T	0.029	1.221	9.954	3.03	0.362	0.894	7.802	1.220848	NA	0.46	0.04056	0.144119	NA	0.101	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118559.1;CLNDSDB=.;CLNDSDBID=.	11.2249734
530	6	33169392	33169392	G	C	exonic	SLC39A7	NA	nonsynonymous SNV	SLC39A7:NM_006979:exon1:c.G370C:p.G124R,SLC39A7:NM_001077516:exon2:c.G370C:p.G124R	exonic	ENSG00000112473	NA	nonsynonymous SNV	ENSG00000112473:ENST00000374677:exon1:c.G370C:p.G124R,ENSG00000112473:ENST00000374675:exon2:c.G370C:p.G124R	Score=663;Name=lod=660	NA	6p21.32	Score=808;Name=V$ARP1_01	Name=Pol2	NA	NA	rs35690712	0.03	0.03	0.025	0.0265575	0.0368	0.0129	0.0274	0.0129	0.0481	0.03	0.01	0.04	0.02	0.0354	0.043	0.62	T	0.0	B	0.001	B	0.481	N	0.894	N	0.695	N	0.2	T	-1.020	T	0.037	T	0.02	1.848	12.14	2.26	0.308	0.245	5.012	1.847875	1.847875	0.01	0.039066	0.00689	NA	0.072	NA	11.2220674
530	19	44352639	44352639	G	A	exonic	ZNF283	NA	nonsynonymous SNV	ZNF283:NM_181845:exon7:c.G1886A:p.R629H	exonic	ENSG00000167637	NA	nonsynonymous SNV	ENSG00000167637:ENST00000588797:exon6:c.G1469A:p.R490H,ENSG00000167637:ENST00000324461:exon7:c.G1886A:p.R629H	NA	NA	19q13.31	NA	NA	NA	NA	rs1061768	0.16	0.16	0.159	0.14976	0.2227	0.0744	0.1787	0.1316	0.1564	0.23	0.08	0.15	0.17	0.1826	0.23	0	D	0.564	P	0.128	B	.	.	0.000	P	0.11	N	2.48	T	-0.944	T	0.000	T	0.053	1.805	12	2.61	1.440	3.677	12.363	1.805208	1.805208	0	0.207378	0.136605	NA	0.21	NA	11.2206554
530	1	21798144	21798144	C	T	exonic	NBPF3	NA	nonsynonymous SNV	NBPF3:NM_001256417:exon4:c.C319T:p.R107C,NBPF3:NM_001256416:exon5:c.C529T:p.R177C,NBPF3:NM_032264:exon5:c.C529T:p.R177C	exonic	ENSG00000142794	NA	nonsynonymous SNV	ENSG00000142794:ENST00000454000:exon4:c.C319T:p.R107C,ENSG00000142794:ENST00000318249:exon5:c.C529T:p.R177C,ENSG00000142794:ENST00000342104:exon5:c.C529T:p.R177C,ENSG00000142794:ENST00000318220:exon8:c.C361T:p.R121C,ENSG00000142794:ENST00000434838:exon9:c.C361T:p.R121C	NA	NA	1p36.12	NA	NA	NA	NA	rs142355608	0.02	0.02	0.014	0.0185703	0.0358	NA	0.0231	0.0136	0.0235	0.04	NA	0.03	0.01	0.0347	0.047	0.18	T	1.0	D	0.977	D	.	.	1.000	N	0.835	L	4.09	T	-1.064	T	0.027	T	0.443	-0.398	2.136	-2.25	-0.893	-2.305	2.689	-0.397871	NA	0.11	0.046882	0.016795	NA	0.022	NA	11.2159514
531	18	63530016	63530016	A	G	exonic	CDH7	NA	nonsynonymous SNV	CDH7:NM_004361:exon11:c.A1727G:p.N576S,CDH7:NM_033646:exon11:c.A1727G:p.N576S	exonic	ENSG00000081138	NA	nonsynonymous SNV	ENSG00000081138:ENST00000323011:exon11:c.A1727G:p.N576S,ENSG00000081138:ENST00000397968:exon11:c.A1727G:p.N576S,ENSG00000081138:ENST00000536984:exon11:c.A1727G:p.N576S	Score=522;Name=lod=177	NA	18q22.1	Score=734;Name=V$PAX4_04	NA	NA	NA	rs2291343	0.68	0.68	0.64	0.629593	0.7087	0.9196	0.7421	0.2814	0.6401	0.71	0.94	0.76	0.28	0.7023	0.94	1	T	0.022	B	0.027	B	0.000	D	0.000	P	0.11	N	0.77	T	-0.952	T	0.000	T	0.058	1.639	11.44	5.37	2.044	3.177	15.355	1.639132	1.639132	0.54	0.71	0.35429	NA	0.543	NA	11.2123334
531	9	2838470	2838470	C	T	exonic	KIAA0020	NA	nonsynonymous SNV	KIAA0020:NM_014878:exon2:c.G38A:p.S13N	exonic	ENSG00000080608	NA	nonsynonymous SNV	ENSG00000080608:ENST00000397885:exon2:c.G38A:p.S13N	Score=395;Name=lod=54	Name=Obesity-related traits	9p24.2	NA	NA	Name=99	NA	rs10968457	0.04	0.04	0.032	0.0385383	0.0437	0.0536	0.0533	0.0189	0.0337	0.04	0.07	0.04	0.01	0.0406	0.07	0.69	T	0.0	B	0.0	B	0.769	N	1.000	N	0.205	N	-2.11	D	-1.024	T	0.044	T	0.009	-0.44	1.958	-1.52	-0.419	0.029	10.248	-0.439506	NA	NA	0.041088	0.026044	NA	0.058	NA	11.2079454
532	15	63419699	63419699	A	C	exonic	LACTB	NA	nonsynonymous SNV	LACTB:NM_032857:exon4:c.A763C:p.K255Q,LACTB:NM_171846:exon4:c.A763C:p.K255Q	exonic	ENSG00000103642	NA	nonsynonymous SNV	ENSG00000103642:ENST00000557972:exon3:c.A286C:p.K96Q,ENSG00000103642:ENST00000261893:exon4:c.A763C:p.K255Q,ENSG00000103642:ENST00000413507:exon4:c.A763C:p.K255Q	NA	NA	15q22.2	NA	NA	NA	NA	rs34536322	0.02	0.02	0.012	0.0153754	0.0507	NA	0.0259	0.0015	0.0061	0.05	NA	0.02	0.0041	0.0311	0.05	0.31	T	0.09	B	0.015	B	0.011	N	0.937	D	0.805	L	0.82	T	-1.075	T	0.017	T	0.196	0.779	8.11	6.07	2.330	2.731	11.689	0.778652	NA	0.04	0.047242	0.010667	NA	0.014	NA	11.2042914
532	17	48437456	48437456	C	G	exonic	XYLT2	NA	nonsynonymous SNV	XYLT2:NM_022167:exon11:c.C2402G:p.T801R	exonic	ENSG00000015532	NA	nonsynonymous SNV	ENSG00000015532:ENST00000017003:exon11:c.C2402G:p.T801R	NA	NA	17q21.33	Score=824;Name=V$GR_Q6	Name=Pol2	NA	NA	rs6504649	0.27	0.27	0.241	0.250998	0.4006	0.0962	0.2767	0.1989	0.3088	0.41	0.09	0.32	0.23	0.3324	0.41	0	D	0.025	B	0.036	B	0.018	N	0.998	P	0.345	N	3.69	T	-0.908	T	0.000	T	0.184	0.282	5.524	1.87	0.273	3.021	5.830	0.281686	NA	0.01	0.397534	0.241489	ID=COSM1384191;OCCURENCE=1(large_intestine)	0.188	CLINSIG=other;CLNDBN=Pseudoxanthoma_elasticum\x2c_modifier_of_severity_of;CLNREVSTAT=single;CLNACC=RCV000002642.2;CLNDSDB=MedGen;CLNDSDBID=C1842481	11.2027994
532	12	56092668	56092668	C	T	exonic	ITGA7	NA	nonsynonymous SNV	ITGA7:NM_001144996:exon6:c.G836A:p.R279H,ITGA7:NM_001144997:exon6:c.G545A:p.R182H,ITGA7:NM_002206:exon6:c.G824A:p.R275H	exonic	ENSG00000135424	NA	nonsynonymous SNV	ENSG00000135424:ENST00000556273:exon3:c.G98A:p.R33H,ENSG00000135424:ENST00000557257:exon4:c.G350A:p.R117H,ENSG00000135424:ENST00000257879:exon6:c.G824A:p.R275H,ENSG00000135424:ENST00000347027:exon6:c.G824A:p.R275H,ENSG00000135424:ENST00000394229:exon6:c.G824A:p.R275H,ENSG00000135424:ENST00000394230:exon6:c.G836A:p.R279H,ENSG00000135424:ENST00000452168:exon6:c.G545A:p.R182H,ENSG00000135424:ENST00000553804:exon6:c.G836A:p.R279H,ENSG00000135424:ENST00000257880:exon7:c.G956A:p.R319H,ENSG00000135424:ENST00000555728:exon7:c.G956A:p.R319H	Score=640;Name=lod=530	NA	12q13.2	NA	NA	NA	NA	rs74867235	0.02	0.02	0.019	0.0155751	0.0427	0.001	0.0231	0.0038	0.0133	0.04	NA	0.02	0.01	0.0367	0.053	0.23	T	0.017	B	0.02	B	0.028	N	0.696	D	0.205	N	1.96	T	-0.982	T	0.032	T	0.255	2.063	12.85	2.64	0.643	-0.015	8.994	2.062739	2.062739	0.09	0.052791	0.010667	NA	0.007	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000079991.3;CLNDSDB=.;CLNDSDBID=.	11.2011424
532	12	52710721	52710721	G	C	exonic	KRT83	NA	nonsynonymous SNV	KRT83:NM_002282:exon5:c.C837G:p.I279M	exonic	ENSG00000170523	NA	nonsynonymous SNV	ENSG00000170523:ENST00000293670:exon5:c.C837G:p.I279M	Score=554;Name=lod=237	NA	12q13.13	NA	NA	NA	NA	rs2852464	0.34	0.34	0.361	0.359225	0.3877	0.1885	0.2997	0.4713	0.3967	0.38	0.19	0.31	0.48	0.3624	0.48	0.01	D	0.765	P	0.841	P	0.446	U	0.996	P	2.975	M	-2.68	D	-1.097	T	0.000	T	0.227	2.043	12.79	-0.295	-0.327	0.505	8.922	2.043241	2.043241	0.01	0.382209	0.457785	ID=COSM147525;OCCURENCE=1(stomach)	0.42	NA	11.2010244
532	6	96034844	96034844	C	T	exonic	MANEA	NA	nonsynonymous SNV	MANEA:NM_024641:exon2:c.C529T:p.R177C	exonic	ENSG00000172469	NA	nonsynonymous SNV	ENSG00000172469:ENST00000358812:exon2:c.C529T:p.R177C,ENSG00000172469:ENST00000369293:exon2:c.C529T:p.R177C	Score=561;Name=lod=255	NA	6q16.1	NA	NA	NA	NA	rs62619206	0.04	0.04	0.038	0.0341454	0.0517	NA	0.0375	0.0643	0.0082	0.04	NA	0.04	0.06	0.0372	0.061	0.04	D	0.038	B	0.01	B	0.023	N	1.000	D	1.455	L	.	.	-1.040	T	0.078	T	0.15	1.839	12.11	2.67	0.233	0.477	9.525	1.838805	1.838805	0.05	0.0436	0.060698	ID=COSM1446510;OCCURENCE=1(large_intestine)	0.036	NA	11.2008334
532	4	89772301	89772301	C	A	exonic	FAM13A	NA	nonsynonymous SNV	FAM13A:NM_014883:exon7:c.G877T:p.A293S	exonic	ENSG00000138640	NA	nonsynonymous SNV	ENSG00000138640:ENST00000264344:exon7:c.G877T:p.A293S	NA	NA	4q22.1	NA	Name=CTCF	NA	NA	rs7680970	0.06	0.06	0.071	0.071885	0.0398	NA	0.0202	0.208	0.0317	0.04	NA	0.02	0.19	0.0528	0.2	0.71	T	0.001	B	0.001	B	0.174	N	1.000	P	0.14	N	2.27	T	-1.004	T	0.000	T	0.033	-0.996	0.266	-8.65	-2.955	-2.226	1.815	-0.996427	NA	0.73	0.043256	0.199047	NA	0.094	NA	11.1974774
532	2	211456637	211456637	A	G	exonic	CPS1	NA	nonsynonymous SNV	CPS1:NM_001875:exon10:c.A1030G:p.T344A,CPS1:NM_001122633:exon11:c.A1048G:p.T350A	exonic	ENSG00000021826	NA	nonsynonymous SNV	ENSG00000021826:ENST00000233072:exon10:c.A1030G:p.T344A,ENSG00000021826:ENST00000430249:exon11:c.A1048G:p.T350A	Score=657;Name=lod=622	NA	2q34	NA	NA	NA	NA	rs1047883	0.56	0.56	0.572	NA	NA	NA	NA	NA	NA	0.55	0.53	0.48	0.69	0.5697	0.69	0.04	D	0.001	B	0.006	B	0.001	N	0.000	P	2.025	M	-2.59	D	-0.903	T	0.000	T	0.076	1.455	10.81	-0.92	-0.609	0.253	12.858	1.45497	1.45497	0.04	0.567558	0.638901	NA	NA	CLINSIG=probable-non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000116829.2|RCV000124588.1;CLNDSDB=.|.;CLNDSDBID=.|.	11.1960754
532	19	38912764	38912764	A	G	exonic	RASGRP4	NA	nonsynonymous SNV	RASGRP4:NM_001146202:exon2:c.T53C:p.I18T,RASGRP4:NM_001146203:exon2:c.T53C:p.I18T,RASGRP4:NM_001146204:exon2:c.T53C:p.I18T,RASGRP4:NM_001146205:exon2:c.T53C:p.I18T,RASGRP4:NM_001146206:exon2:c.T53C:p.I18T,RASGRP4:NM_001146207:exon2:c.T53C:p.I18T,RASGRP4:NM_170604:exon2:c.T53C:p.I18T	exonic	ENSG00000171777	NA	nonsynonymous SNV	ENSG00000171777:ENST00000293062:exon2:c.T53C:p.I18T,ENSG00000171777:ENST00000426920:exon2:c.T53C:p.I18T,ENSG00000171777:ENST00000433821:exon2:c.T53C:p.I18T,ENSG00000171777:ENST00000454404:exon2:c.T53C:p.I18T,ENSG00000171777:ENST00000586305:exon2:c.T53C:p.I18T,ENSG00000171777:ENST00000587738:exon2:c.T53C:p.I18T,ENSG00000171777:ENST00000587753:exon2:c.T53C:p.I18T,ENSG00000171777:ENST00000589358:exon2:c.T53C:p.I18T,ENSG00000171777:ENST00000589474:exon2:c.T53C:p.I18T	NA	Name=Asperger disorder	19q13.2	Score=874;Name=V$SPZ1_01	NA	NA	NA	rs892055	0.49	0.49	0.465	0.538339	0.3549	0.5536	0.4539	0.6604	0.6063	0.37	0.56	0.42	0.64	0.4307	0.64	1	T	0.019	B	0.011	B	0.832	N	1.000	P	-1.39	N	1.7	T	-0.935	T	0.000	T	0.016	-2.12	0.005	4.07	1.089	2.730	10.023	-2.119697	NA	1	0.352656	0.578687	NA	0.413	NA	11.1950774
533	12	121615103	121615103	G	A	exonic	P2RX7	NA	nonsynonymous SNV	P2RX7:NM_002562:exon11:c.G1042A:p.A348T	exonic	ENSG00000089041	NA	nonsynonymous SNV	ENSG00000089041:ENST00000541446:exon9:c.G175A:p.A59T,ENSG00000089041:ENST00000328963:exon10:c.G532A:p.A178T,ENSG00000089041:ENST00000546057:exon11:c.G1042A:p.A348T,ENSG00000089041:ENST00000535250:exon12:c.G772A:p.A258T	Score=349;Name=lod=35	NA	12q24.31	Score=751;Name=V$SEF1_C	NA	Name=16	NA	rs1718119	0.31	0.31	0.334	0.322484	0.3827	0.1419	0.2003	0.4599	0.3476	0.39	0.13	0.21	0.47	0.3582	0.47	1	T	0.001	B	0.0	B	0.044	N	0.000	P	-2.095	N	3.88	T	-0.964	T	0.000	T	0.399	0.482	6.616	5.62	0.980	0.672	7.451	0.482145	NA	1	0.397442	0.455515	ID=COSM430526;OCCURENCE=1(breast)	0.406	NA	11.1949914
533	2	220420785	220420785	G	A	exonic	OBSL1	NA	synonymous SNV	OBSL1:NM_001173431:exon14:c.C4566T:p.C1522C,OBSL1:NM_015311:exon14:c.C4566T:p.C1522C	exonic	ENSG00000124006	NA	nonsynonymous SNV	ENSG00000124006:ENST00000265318:exon13:c.C4166T:p.A1389V	Score=599;Name=lod=361	NA	2q35	NA	NA	NA	NA	rs3087971	0.26	0.26	0.204	0.229233	0.2734	0.2837	0.2983	0.2224	0.0879	0.27	0.3	0.29	0.19	0.2548	0.3	0	D	.	.	.	.	.	.	0.000	P	.	.	0.43	T	-0.959	T	0.000	T	.	-0.453	1.9	-6.84	-1.935	-2.148	14.848	-0.453356	NA	0	0.278369	0.223168	NA	0.145	NA	11.193431
533	4	69343287	69343287	A	G	exonic	TMPRSS11E	NA	nonsynonymous SNV	TMPRSS11E:NM_014058:exon8:c.A908G:p.Y303C	exonic	ENSG00000087128	NA	nonsynonymous SNV	ENSG00000087128:ENST00000305363:exon8:c.A908G:p.Y303C	NA	NA	4q13.2	NA	NA	NA	NA	rs976002	0.19	0.19	0.167	0.190296	0.1879	0.0873	0.317	0.2133	0.1779	0.19	0.08	0.28	0.23	0.2213	0.28	0.12	T	0.986	D	0.631	P	0.353	N	1.000	P	1.32	L	-2.4	D	-1.215	T	0.000	T	0.148	2.322	13.72	3.0	0.884	2.022	7.869	2.322425	2.322425	0.17	0.231163	0.219927	NA	0.13	NA	11.1929704
533	12	49390677	49390677	T	C	exonic	DDN	NA	nonsynonymous SNV	DDN:NM_015086:exon2:c.A1982G:p.E661G	exonic	ENSG00000181418	NA	nonsynonymous SNV	ENSG00000181418:ENST00000421952:exon2:c.A1982G:p.E661G	NA	NA	12q13.12	NA	Name=ELF1_(SC-631),Rad21,CTCF,CTCFL_(SC-98982),Znf143_(16618-1-AP),YY1_(C-20),PU.1,SMC3_(ab9263),CTCF_(C-20),ZBTB7A_(SC-34508),HEY1,CTCF_(SC-5916),YY1	Name=127	NA	rs10783299	0.4	0.4	0.423	0.438698	0.3539	0.4425	0.2939	0.553	0.4703	0.36	0.41	0.3	0.55	0.4141	0.55	0.78	T	0.0	B	0.0	B	0.293	N	1.000	P	-0.345	N	0.94	T	-0.986	T	0.000	T	0.01	-0.158	3.227	-5.81	-2.010	-1.178	2.493	-0.1582	NA	0.46	0.373372	0.511575	ID=COSM147494,COSM1476598;OCCURENCE=1(breast),1(stomach)	0.406	NA	11.1919614
533	1	228505204	228505204	G	A	exonic	OBSCN	NA	nonsynonymous SNV	OBSCN:NM_001098623:exon52:c.G13601A:p.R4534H,OBSCN:NM_052843:exon52:c.G13601A:p.R4534H,OBSCN:NM_001271223:exon63:c.G16472A:p.R5491H	exonic	ENSG00000154358	NA	nonsynonymous SNV	ENSG00000154358:ENST00000284548:exon52:c.G13601A:p.R4534H,ENSG00000154358:ENST00000366709:exon52:c.G4958A:p.R1653H,ENSG00000154358:ENST00000422127:exon52:c.G13601A:p.R4534H,ENSG00000154358:ENST00000366707:exon58:c.G6503A:p.R2168H,ENSG00000154358:ENST00000570156:exon63:c.G16472A:p.R5491H	NA	NA	1q42.13	NA	NA	NA	NA	rs4653942	0.34	0.34	0.336	0.315296	0.1869	0.499	0.2954	0.3941	0.1656	0.2	0.5	0.31	0.38	0.2619	0.5	0.12	T	0.994	D	0.706	P	0.229	N	1.000	P	0.875	L	0.37	T	-0.932	T	0.000	T	0.176	2.12	13.05	2.36	1.099	1.330	2.871	2.120013	2.120013	0.1	0.194378	0.376582	NA	0.254	NA	11.1901554
533	15	42171655	42171655	C	A	exonic	SPTBN5	NA	nonsynonymous SNV	SPTBN5:NM_016642:exon16:c.G2985T:p.Q995H	exonic	ENSG00000137877	NA	nonsynonymous SNV	ENSG00000137877:ENST00000320955:exon16:c.G2985T:p.Q995H	Score=284;Name=lod=19	NA	15q15.1	NA	NA	NA	NA	rs55637254	0.02	0.02	0.014	0.0307508	0.0368	0.0129	0.0519	NA	0.0695	0.04	0.01	0.05	NA	0.0699	0.05	0.03	D	0.267	B	0.079	B	0.019	N	0.986	N	1.52	L	0.66	T	-1.056	T	0.018	T	0.072	1.476	10.88	2.71	1.024	0.462	5.151	1.476158	1.476158	0.01	0.036685	0.00669	NA	NA	NA	11.1899484
533	11	8752598	8752598	G	C	exonic	ST5	NA	nonsynonymous SNV	ST5:NM_213618:exon3:c.C239G:p.P80R,ST5:NM_005418:exon6:c.C239G:p.P80R	exonic	ENSG00000166444	NA	nonsynonymous SNV	ENSG00000166444:ENST00000313726:exon3:c.C239G:p.P80R,ENSG00000166444:ENST00000527930:exon3:c.C329G:p.P110R,ENSG00000166444:ENST00000528523:exon3:c.C239G:p.P80R,ENSG00000166444:ENST00000533016:exon3:c.C299G:p.P100R,ENSG00000166444:ENST00000533580:exon3:c.C290G:p.P97R,ENSG00000166444:ENST00000533681:exon3:c.C239G:p.P80R,ENSG00000166444:ENST00000357665:exon4:c.C239G:p.P80R,ENSG00000166444:ENST00000526155:exon4:c.C239G:p.P80R,ENSG00000166444:ENST00000526241:exon4:c.C239G:p.P80R,ENSG00000166444:ENST00000527473:exon4:c.C239G:p.P80R,ENSG00000166444:ENST00000534248:exon4:c.C239G:p.P80R,ENSG00000166444:ENST00000527347:exon5:c.C239G:p.P80R,ENSG00000166444:ENST00000530959:exon5:c.C239G:p.P80R,ENSG00000166444:ENST00000527516:exon6:c.C239G:p.P80R,ENSG00000166444:ENST00000534127:exon6:c.C239G:p.P80R	NA	NA	11p15.4	NA	NA	NA	NA	rs61751342	0.02	0.02	0.022	0.0177716	0.0537	NA	0.0216	0.0008	0.0194	0.05	NA	0.02	0.0041	0.0384	0.055	0.12	T	0.838	P	0.466	P	0.005	N	0.961	N	1.15	L	3.5	T	-1.002	T	0.003	T	0.362	1.458	10.82	4.59	1.314	3.158	7.957	1.458111	1.458111	0.37	0.054702	0.01204	NA	NA	NA	11.1865314
533	6	70984436	70984436	A	G	exonic	COL9A1	NA	nonsynonymous SNV	COL9A1:NM_078485:exon5:c.T286C:p.S96P,COL9A1:NM_001851:exon11:c.T1015C:p.S339P	exonic	ENSG00000112280	NA	nonsynonymous SNV	ENSG00000112280:ENST00000320755:exon5:c.T286C:p.S96P,ENSG00000112280:ENST00000370499:exon5:c.T286C:p.S96P,ENSG00000112280:ENST00000357250:exon11:c.T1015C:p.S339P	Score=472;Name=lod=111	NA	6q13	NA	NA	NA	NA	rs592121	0.44	0.44	0.466	0.482428	0.3628	0.3145	0.4294	0.7231	0.4908	0.36	0.32	0.4	0.71	0.4065	0.71	0.92	T	0.001	B	0.0	B	0.000	N	0.000	P	-2.28	N	-2.63	D	-0.902	T	0.156	T	0.039	1.706	11.66	4.98	1.496	2.383	12.120	1.705769	1.705769	0.29	0.377558	0.679301	ID=COSM1179829,COSM1179830;OCCURENCE=1(prostate)	0.667	NA	11.1864754
534	18	7034508	7034508	T	G	exonic	LAMA1	NA	nonsynonymous SNV	LAMA1:NM_005559:exon14:c.A2021C:p.N674T	exonic	ENSG00000101680	NA	nonsynonymous SNV	ENSG00000101680:ENST00000389658:exon14:c.A2021C:p.N674T	Score=475;Name=lod=114	NA	18p11.31	NA	NA	NA	NA	rs566655	0.17	0.17	0.156	0.15016	0.2247	0.1042	0.1974	0.1467	0.092	0.23	0.13	0.18	0.14	0.1928	0.23	1	T	0.751	P	0.446	B	0.000	D	0.490	P	-0.12	N	1.55	T	-1.050	T	0.000	T	0.116	0.14	4.754	4.75	1.067	0.256	9.799	0.140128	NA	NA	0.231047	0.164321	NA	0.138	NA	11.1847864
534	9	103204577	103204577	C	G	exonic	MSANTD3,MSANTD3-TMEFF1	NA	synonymous SNV	MSANTD3-TMEFF1:NM_001198812:exon1:c.C357G:p.L119L,MSANTD3:NM_001198805:exon2:c.C357G:p.L119L,MSANTD3:NM_001198806:exon2:c.C357G:p.L119L,MSANTD3:NM_001198807:exon2:c.C357G:p.L119L,MSANTD3:NM_080655:exon2:c.C357G:p.L119L	exonic	ENSG00000066697,ENSG00000241697,ENSG00000251349	NA	synonymous SNV	ENSG00000241697:ENST00000334943:exon1:c.C18G:p.L6L,ENSG00000066697:ENST00000374885:exon2:c.C357G:p.L119L,ENSG00000066697:ENST00000374886:exon2:c.C357G:p.L119L,ENSG00000066697:ENST00000395067:exon2:c.C357G:p.L119L,ENSG00000066697:ENST00000398977:exon3:c.C357G:p.L119L	Score=452;Name=lod=92	NA	9q31.1	NA	Name=CTCF	NA	NA	rs35438121	0.08	0.08	0.075	0.0700879	0.167	0.001	0.1239	0.0129	0.0808	0.16	NA	0.14	0.02	0.1381	0.18	0.01	D	.	.	.	.	.	.	0.000	P	.	.	0.09	T	-0.943	T	0.001	T	.	1.359	10.47	-2.15	-0.203	-1.163	10.975	1.359305	1.359305	NA	0.17814	0.032229	NA	0.058	NA	11.1834266
534	1	201183424	201183424	G	A	exonic	IGFN1	NA	nonsynonymous SNV	IGFN1:NM_001164586:exon13:c.G8848A:p.V2950I	exonic	ENSG00000163395	NA	nonsynonymous SNV	ENSG00000163395:ENST00000295591:exon13:c.G328A:p.V110I,ENSG00000163395:ENST00000335211:exon13:c.G8848A:p.V2950I,ENSG00000163395:ENST00000437879:exon14:c.G1477A:p.V493I,ENSG00000163395:ENST00000451870:exon14:c.G1477A:p.V493I	Score=462;Name=lod=101	NA	1q32.1	Score=879;Name=V$YY1_01	NA	NA	NA	rs41304263	0.03	0.03	0.024	0.019369	0.0437	NA	0.0389	0.0076	0.0164	0.04	NA	0.04	0.02	0.046	0.061	0.13	T	0.433	B	0.286	B	0.199	N	1.000	N	1.98	M	-0.23	T	-0.968	T	0.035	T	0.127	2.08	12.91	2.75	0.748	0.563	2.109	2.079584	2.079584	0.26	0.060698	0.018157	NA	0.014	NA	11.1829354
534	19	51503285	51503285	C	T	exonic	KLK8	NA	nonsynonymous SNV	KLK8:NM_007196:exon4:c.G460A:p.V154I,KLK8:NM_144505:exon4:c.G595A:p.V199I	exonic	ENSG00000129455	NA	nonsynonymous SNV	ENSG00000129455:ENST00000291726:exon4:c.G460A:p.V154I,ENSG00000129455:ENST00000391806:exon4:c.G595A:p.V199I,ENSG00000129455:ENST00000600767:exon5:c.G460A:p.V154I	Score=333;Name=lod=30	NA	19q13.41	NA	NA	NA	NA	rs16988799	0.05	0.05	0.052	0.0497204	0.0547	NA	0.0375	0.1142	0.0174	0.06	NA	0.06	0.11	0.0464	0.11	1	T	0.052	B	0.04	B	0.016	N	1.000	D	0.385	N	-3.39	D	-0.842	T	0.021	T	0.074	-0.415	2.063	1.64	0.376	1.520	6.428	-0.414887	NA	0.57	0.051512	0.100545	NA	0.08	NA	11.1807214
534	2	26679362	26679362	G	A	exonic	DRC1	NA	nonsynonymous SNV	DRC1:NM_145038:exon17:c.G2200A:p.V734M	exonic	ENSG00000157856	NA	nonsynonymous SNV	ENSG00000157856:ENST00000288710:exon17:c.G2200A:p.V734M	Score=317;Name=lod=26	NA	2p23.3	NA	NA	NA	NA	rs35313480	0.03	0.03	0.018	0.0217652	0.0497	NA	0.0519	0.0023	0.0204	0.05	NA	0.07	0.0041	0.0406	0.07	0.11	T	0.063	B	0.037	B	0.829	N	0.996	N	1.565	L	2.38	T	-1.097	T	0.005	T	0.134	1.891	12.28	4.84	2.398	2.445	13.806	1.890752	1.890752	0.1	0.063953	0.009305	NA	0.014	NA	11.1790804
534	4	87770252	87770252	G	A	exonic	SLC10A6	NA	nonsynonymous SNV	SLC10A6:NM_197965:exon1:c.C17T:p.S6F	exonic	ENSG00000145283	NA	nonsynonymous SNV	ENSG00000145283:ENST00000273905:exon1:c.C17T:p.S6F	Score=378;Name=lod=46	NA	4q21.3	NA	NA	NA	NA	rs17694522	0.03	0.03	0.019	0.0165735	0.0577	NA	0.0245	NA	0.0082	0.07	NA	0.03	NA	0.0408	0.07	0.02	D	0.307	B	0.079	B	0.404	N	0.989	N	0.55	N	3.07	T	-0.969	T	0.002	T	0.151	2.831	15.43	4.1	0.771	1.957	9.904	2.830952	2.830952	0.01	0.057209	0.011121	NA	0.007	NA	11.1776244
535	2	160182302	160182302	C	T	exonic	BAZ2B	NA	nonsynonymous SNV	BAZ2B:NM_013450:exon35:c.G6071A:p.S2024N	exonic	ENSG00000123636	NA	nonsynonymous SNV	ENSG00000123636:ENST00000343439:exon34:c.G5771A:p.S1924N,ENSG00000123636:ENST00000355831:exon34:c.G5969A:p.S1990N,ENSG00000123636:ENST00000392782:exon34:c.G5963A:p.S1988N,ENSG00000123636:ENST00000392783:exon35:c.G6071A:p.S2024N	Score=508;Name=lod=155	NA	2q24.2	NA	NA	NA	NA	rs415793	0.25	0.25	0.228	0.250599	0.2097	0.2321	0.1801	0.329	0.2556	0.22	0.21	0.21	0.37	0.2304	0.37	0.33	T	0.763	P	0.229	B	0.001	U	0.047	P	0.695	N	0.32	T	-0.956	T	0.000	T	0.068	2.09	12.94	5.78	2.730	2.956	11.376	2.08969	2.08969	0.31	0.218926	0.283954	NA	0.232	NA	11.1743074
535	17	15611495	15611495	T	C	exonic	ZNF286A	NA	nonsynonymous SNV	ZNF286A:NM_001130842:exon5:c.T268C:p.Y90H,ZNF286A:NM_020652:exon5:c.T268C:p.Y90H	exonic	ENSG00000187607,ENSG00000255104	NA	nonsynonymous SNV	ENSG00000187607:ENST00000481540:exon3:c.T184C:p.Y62H,ENSG00000187607:ENST00000395893:exon4:c.T268C:p.Y90H,ENSG00000255104:ENST00000412988:exon4:c.T238C:p.Y80H,ENSG00000187607:ENST00000464847:exon4:c.T268C:p.Y90H,ENSG00000187607:ENST00000472486:exon4:c.T238C:p.Y80H,ENSG00000187607:ENST00000593105:exon4:c.T238C:p.Y80H,ENSG00000187607:ENST00000395894:exon5:c.T268C:p.Y90H,ENSG00000255104:ENST00000413242:exon5:c.T268C:p.Y90H,ENSG00000187607:ENST00000421016:exon5:c.T268C:p.Y90H,ENSG00000187607:ENST00000580393:exon5:c.T397C:p.Y133H,ENSG00000187607:ENST00000583566:exon5:c.T268C:p.Y90H,ENSG00000187607:ENST00000585194:exon5:c.T268C:p.Y90H	Score=433;Name=lod=77	NA	17p12	NA	NA	NA	NA	rs3760299	0.48	0.48	0.465	0.508187	0.3708	0.626	0.4207	0.5703	0.5061	0.38	0.6	0.39	0.58	0.4247	0.6	0.03	D	0.001	B	0.001	B	.	.	0.106	P	-0.145	N	5.68	T	-1.062	T	0.000	T	0.178	1.12	9.566	3.9	1.029	1.340	7.510	1.119785	NA	0.19	0.367326	0.558783	ID=COSM436076;OCCURENCE=1(breast)	0.362	NA	11.1705074
535	1	117576522	117576522	A	T	exonic	CD101	NA	nonsynonymous SNV	CD101:NM_001256106:exon9:c.A2865T:p.L955F,CD101:NM_001256109:exon9:c.A2865T:p.L955F,CD101:NM_001256111:exon9:c.A2679T:p.L893F,CD101:NM_004258:exon9:c.A2865T:p.L955F	exonic	ENSG00000134256	NA	nonsynonymous SNV	ENSG00000134256:ENST00000256652:exon9:c.A2865T:p.L955F,ENSG00000134256:ENST00000369470:exon9:c.A2865T:p.L955F	NA	NA	1p13.1	NA	NA	NA	NA	rs34223095	0.03	0.03	0.022	0.0455272	0.0477	0.002	0.0663	0.0008	0.1339	0.05	0.0017	0.07	NA	0.0566	0.07	0	D	0.386	B	0.101	B	0.049	N	1.000	N	1.1	L	3.16	T	-1.058	T	0.006	T	0.204	2.175	13.23	-8.22	-1.695	-1.784	12.139	2.174648	2.174648	0.09	0.05907	0.011348	NA	0.029	NA	11.1699634
535	8	32453358	32453358	G	A	exonic	NRG1	NA	nonsynonymous SNV	NRG1:NM_001160002:exon2:c.G113A:p.R38Q,NRG1:NM_001160004:exon2:c.G113A:p.R38Q,NRG1:NM_001160005:exon2:c.G113A:p.R38Q,NRG1:NM_001160007:exon2:c.G113A:p.R38Q,NRG1:NM_001160008:exon2:c.G113A:p.R38Q,NRG1:NM_004495:exon2:c.G113A:p.R38Q,NRG1:NM_013956:exon2:c.G113A:p.R38Q,NRG1:NM_013957:exon2:c.G113A:p.R38Q,NRG1:NM_013958:exon2:c.G113A:p.R38Q,NRG1:NM_013960:exon2:c.G113A:p.R38Q,NRG1:NM_013962:exon2:c.G758A:p.R253Q,NRG1:NM_013964:exon2:c.G113A:p.R38Q	exonic	ENSG00000157168	NA	nonsynonymous SNV	ENSG00000157168:ENST00000287840:exon2:c.G113A:p.R38Q,ENSG00000157168:ENST00000287842:exon2:c.G113A:p.R38Q,ENSG00000157168:ENST00000287845:exon2:c.G113A:p.R38Q,ENSG00000157168:ENST00000338921:exon2:c.G113A:p.R38Q,ENSG00000157168:ENST00000341377:exon2:c.G113A:p.R38Q,ENSG00000157168:ENST00000356819:exon2:c.G113A:p.R38Q,ENSG00000157168:ENST00000518104:exon2:c.G50A:p.R17Q,ENSG00000157168:ENST00000519301:exon2:c.G50A:p.R17Q,ENSG00000157168:ENST00000520407:exon2:c.G758A:p.R253Q,ENSG00000157168:ENST00000521670:exon2:c.G113A:p.R38Q,ENSG00000157168:ENST00000523079:exon2:c.G113A:p.R38Q,ENSG00000157168:ENST00000523534:exon2:c.G317A:p.R106Q,ENSG00000157168:ENST00000405005:exon3:c.G113A:p.R38Q	Score=496;Name=lod=138	NA	8p12	NA	NA	NA	NA	rs3924999	0.41	0.41	0.414	0.385184	0.3767	0.7589	0.3746	0.0666	0.4468	0.37	0.78	0.35	0.09	0.3913	0.78	0.08	T	0.966	D	0.245	B	0.020	N	0.000	P	0.895	L	1.02	T	-1.014	T	0.000	T	0.326	3.45	17.68	5.65	2.826	3.343	9.101	3.450326	3.450326	0.05	0.395814	0.133	NA	0.391	NA	11.1695194
536	10	102050242	102050242	C	A	exonic	PKD2L1	NA	nonsynonymous SNV	PKD2L1:NM_001253837:exon13:c.G1901T:p.R634L,PKD2L1:NM_016112:exon13:c.G2042T:p.R681L	exonic	ENSG00000107593	NA	nonsynonymous SNV	ENSG00000107593:ENST00000338519:exon12:c.G1817T:p.R606L,ENSG00000107593:ENST00000318222:exon13:c.G2042T:p.R681L,ENSG00000107593:ENST00000353274:exon13:c.G2042T:p.R681L	NA	NA	10q24.31	NA	NA	NA	NA	rs6584356	0.07	0.07	0.063	0.0836661	0.0577	0.0605	0.0591	0.1248	0.0961	0.06	0.07	0.07	0.1	0.0593	0.1	0.01	D	0.268	B	0.051	B	0.408	N	1.000	P	1.585	L	-0.82	T	-0.903	T	0.013	T	0.049	1.023	9.177	-6.23	-1.207	-1.306	14.653	1.02255	NA	0.01	0.054884	0.098048	NA	0.051	NA	11.1614494
536	16	1129010	1129010	C	A	exonic	SSTR5	NA	nonsynonymous SNV	SSTR5:NM_001053:exon1:c.C142A:p.L48M,SSTR5:NM_001172560:exon2:c.C142A:p.L48M	exonic	ENSG00000162009	NA	nonsynonymous SNV	ENSG00000162009:ENST00000293897:exon1:c.C142A:p.L48M,ENSG00000162009:ENST00000562758:exon1:c.C142A:p.L48M,ENSG00000162009:ENST00000397547:exon2:c.C142A:p.L48M	Score=389;Name=lod=51	NA	16p13.3	NA	NA	NA	NA	rs4988483	0.03	0.03	0.042	0.0213658	0.0646	NA	0.0403	0.003	0.0102	0.05	NA	0.04	0.01	0.0528	0.055	0.24	T	0.928	P	0.753	P	0.032	N	0.938	D	2.015	M	1.38	T	-1.092	T	0.025	T	0.276	1.638	11.44	1.39	0.035	0.345	6.154	1.638295	1.638295	0.12	0.054804	0.011494	NA	0.014	NA	11.1611294
536	1	248309356	248309356	A	G	exonic	OR2M5	NA	nonsynonymous SNV	OR2M5:NM_001004690:exon1:c.A907G:p.K303E	exonic	ENSG00000162727	NA	nonsynonymous SNV	ENSG00000162727:ENST00000366476:exon1:c.A907G:p.K303E	NA	NA	1q44	NA	NA	NA	NA	rs73141283	0.06	0.06	0.054	0.0545128	0.0646	0.0754	0.0187	0.0575	0.044	0.06	0.1	0.02	0.06	0.0555	0.1	0	D	0.011	B	0.023	B	.	.	1.000	P	2.615	M	1.03	T	-1.002	T	0.005	T	0.089	1.897	12.3	2.65	0.948	1.499	8.695	1.896938	1.896938	0	0.05314	0.056287	NA	0.072	NA	11.1600934
537	10	29581493	29581493	A	C	exonic	LYZL1	NA	nonsynonymous SNV	LYZL1:NM_032517:exon3:c.A323C:p.Q108P	exonic	ENSG00000120563	NA	nonsynonymous SNV	ENSG00000120563:ENST00000494304:exon2:c.A128C:p.Q43P,ENSG00000120563:ENST00000375500:exon3:c.A323C:p.Q108P	NA	NA	10p12.1	NA	NA	NA	NA	rs3818551	0.28	0.28	0.206	0.255192	0.2227	0.2748	0.2795	0.2504	0.2577	0.24	0.29	0.31	0.29	0.2423	0.31	0.05	D	0.731	P	0.3	B	0.399	N	0.999	P	1.24	L	-0.86	T	-1.087	T	0.000	T	0.443	0.669	7.583	4.4	1.937	0.971	10.610	0.669163	NA	0.12	0.213721	0.24512	NA	0.188	NA	11.1546124
537	18	9944960	9944960	A	G	exonic	VAPA	NA	nonsynonymous SNV	VAPA:NM_003574:exon5:c.A457G:p.M153V	exonic	ENSG00000101558	NA	nonsynonymous SNV	ENSG00000101558:ENST00000340541:exon5:c.A457G:p.M153V	NA	NA	18p11.22	NA	Name=CEBPB,FOXA2_(SC-6554)	Name=6	NA	rs29132	0.08	0.08	0.071	0.0840655	0.0527	0.0774	0.1052	0.1263	0.0511	0.06	0.07	0.07	0.15	0.0744	0.15	.	.	0.0	B	0.0	B	0.138	N	1.000	P	.	.	1.59	T	-1.093	T	0.000	T	0.013	-0.841	0.572	-11.3	-4.044	-2.575	5.383	-0.840846	NA	NA	0.054145	0.128186	NA	0.065	NA	11.1520884
537	20	61459315	61459315	C	T	exonic	COL9A3	NA	nonsynonymous SNV	COL9A3:NM_001853:exon17:c.C887T:p.P296L	exonic	ENSG00000092758	NA	nonsynonymous SNV	ENSG00000092758:ENST00000343916:exon17:c.C887T:p.P296L	Score=340;Name=lod=32	NA	20q13.33	Score=830;Name=V$COMP1_01	NA	NA	NA	rs45628843	0.04	0.04	0.038	0.024361	0.0865	NA	0.0461	0.0015	0.001	0.08	NA	0.05	0.0041	0.038	0.08	0.41	T	0.027	B	0.021	B	0.000	U	1.000	D	0.92	L	-4.09	D	-0.607	T	0.126	T	0.107	0.091	4.489	1.12	0.199	0.161	5.557	0.090672	NA	0.23	0.061279	0.013624	NA	0.029	NA	11.1475544
537	12	39713776	39713776	C	A	exonic	KIF21A	NA	nonsynonymous SNV	KIF21A:NM_001173463:exon26:c.G3651T:p.E1217D,KIF21A:NM_001173465:exon26:c.G3603T:p.E1201D,KIF21A:NM_017641:exon27:c.G3672T:p.E1224D,KIF21A:NM_001173464:exon28:c.G3711T:p.E1237D	exonic	ENSG00000139116	NA	nonsynonymous SNV	ENSG00000139116:ENST00000551264:exon7:c.G834T:p.E278D,ENSG00000139116:ENST00000541463:exon26:c.G3603T:p.E1201D,ENSG00000139116:ENST00000544797:exon26:c.G3651T:p.E1217D,ENSG00000139116:ENST00000361961:exon27:c.G3672T:p.E1224D,ENSG00000139116:ENST00000395670:exon27:c.G3711T:p.E1237D,ENSG00000139116:ENST00000361418:exon28:c.G3711T:p.E1237D	Score=420;Name=lod=68	NA	12q12	NA	NA	NA	NA	rs75223821	0.05	0.05	0.062	0.0549121	0.0596	0.1151	0.0288	0.0053	0.0736	0.06	0.1	0.03	0.01	0.0653	0.1	0.57	T	0.996	D	0.987	D	0.000	D	0.266	P	0.96	L	0.35	T	-1.042	T	0.004	T	0.473	1.94	12.45	1.43	0.376	0.500	8.279	1.940324	1.940324	0.22	0.063023	0.009541	NA	0.036	NA	11.1454104
538	19	54759361	54759361	T	C	exonic	LILRB5	NA	nonsynonymous SNV	LILRB5:NM_001081443:exon4:c.A440G:p.D147G,LILRB5:NM_001081442:exon5:c.A740G:p.D247G,LILRB5:NM_006840:exon5:c.A740G:p.D247G	exonic	ENSG00000105609	NA	nonsynonymous SNV	ENSG00000105609:ENST00000345866:exon4:c.A440G:p.D147G,ENSG00000105609:ENST00000316219:exon5:c.A740G:p.D247G,ENSG00000105609:ENST00000449561:exon5:c.A740G:p.D247G,ENSG00000105609:ENST00000450632:exon5:c.A713G:p.D238G	NA	NA	19q13.42	NA	NA	Name=2	NA	rs12975366	0.27	0.27	0.266	0.270767	0.4344	0.125	0.3213	0.1483	0.3824	0.41	0.08	0.37	0.18	0.3444	0.41	0.02	D	1.0	D	0.991	D	0.878	N	1.000	P	2.405	M	2.57	T	-0.960	T	0.000	T	0.208	2.356	13.84	1.52	0.372	0.165	5.559	2.356397	2.356397	0.01	0.410349	0.179301	ID=COSM1396264,COSM1396263;OCCURENCE=1(large_intestine)	0.239	NA	11.1441844
538	13	37583831	37583831	G	A	exonic	SUPT20H	NA	nonsynonymous SNV	SUPT20H:NM_001014286:exon26:c.C2318T:p.T773M	exonic	ENSG00000102710	NA	nonsynonymous SNV	ENSG00000102710:ENST00000350612:exon26:c.C2318T:p.T773M	Score=590;Name=lod=334	NA	13q13.3	Score=969;Name=V$P53_02	Name=Pol2-4H8	NA	NA	rs9469	0.42	0.42	0.401	0.413139	0.3787	0.7232	0.4222	0.0809	0.5716	0.39	0.7	0.43	0.11	0.4128	0.7	0.16	T	0.006	B	0.004	B	0.001	N	0.000	P	0.665	N	1.4	T	-1.003	T	0.000	T	0.193	0.874	8.546	4.18	0.832	3.130	10.349	0.874397	NA	NA	0.398256	0.140263	NA	0.348	NA	11.1435774
538	22	30163526	30163526	A	G	exonic	UQCR10	NA	nonsynonymous SNV	UQCR10:NM_001003684:exon1:c.A139G:p.I47V,UQCR10:NM_013387:exon1:c.A139G:p.I47V	exonic	ENSG00000184076	NA	nonsynonymous SNV	ENSG00000184076:ENST00000330029:exon1:c.A139G:p.I47V,ENSG00000184076:ENST00000401406:exon1:c.A139G:p.I47V	Score=433;Name=lod=77	NA	22q12.2	NA	Name=TAF7_(SQ-8),YY1_(C-20),Pol2(phosphoS2),NRSF,Pol2,ETS1,TAF1,TBP,NFKB,c-Myc,Pol2-4H8,Sin3Ak-20,Egr-1,YY1,CTCF_(SC-5916)	NA	NA	rs76013375	0.13	0.13	0.13	0.147564	0.0467	0.0853	0.0951	0.3389	0.0941	0.05	0.1	0.08	0.33	0.0932	0.33	0.52	T	0.194	B	0.107	B	.	.	0.911	P	.	.	0.96	T	-0.966	T	0.000	T	0.117	2.342	13.79	4.63	2.196	0.609	9.248	2.341566	2.341566	0.15	0.051156	0.26206	NA	0.145	NA	11.1422774
538	9	7799653	7799653	G	T	exonic	C9orf123	NA	nonsynonymous SNV	C9orf123:NM_033428:exon1:c.C82A:p.P28T	exonic	ENSG00000137038	NA	nonsynonymous SNV	ENSG00000137038:ENST00000358227:exon1:c.C82A:p.P28T	NA	NA	9p24.1	NA	Name=TAF7_(SQ-8),NRSF,Pol2,Pol2(phosphoS2),TAF1,Pol2-4H8,ELK4,TBP	NA	NA	rs1127430	0.38	0.38	0.32	0.374201	0.3926	0.371	0.5375	0.264	0.3916	0.38	0.34	0.55	0.28	0.4108	0.55	0.01	D	0.879	P	0.488	P	0.042	N	1.000	P	1.935	M	0.66	T	-0.903	T	0.000	T	0.09	3.467	17.75	3.45	0.773	-0.242	8.651	3.467238	3.467238	0.03	0.393256	0.277803	NA	0.239	NA	11.1366774
538	7	121653250	121653250	G	A	exonic	PTPRZ1	NA	nonsynonymous SNV	PTPRZ1:NM_002851:exon12:c.G4150A:p.D1384N	exonic	ENSG00000106278	NA	nonsynonymous SNV	ENSG00000106278:ENST00000393386:exon12:c.G4150A:p.D1384N	NA	NA	7q31.32	Score=924;Name=V$HSF2_01	NA	Name=12	NA	rs61732005	0.09	0.09	0.083	0.0784744	0.0557	0.2093	0.0447	0.0567	0.0204	0.05	0.2	0.05	0.04	0.0662	0.2	0.11	T	0.001	B	0.001	B	0.648	N	1.000	P	0.92	L	0.9	T	-1.072	T	0.000	T	0.008	1.808	12.01	3.29	0.732	3.354	7.981	1.808443	1.808443	0.15	0.075116	0.077621	NA	0.065	NA	11.1363174
539	19	19230816	19230816	T	C	exonic	TMEM161A	NA	nonsynonymous SNV	TMEM161A:NM_001256766:exon10:c.A1054G:p.I352V,TMEM161A:NM_017814:exon12:c.A1363G:p.I455V	exonic	ENSG00000064545	NA	nonsynonymous SNV	ENSG00000064545:ENST00000450333:exon10:c.A1054G:p.I352V,ENSG00000064545:ENST00000162044:exon12:c.A1363G:p.I455V,ENSG00000064545:ENST00000587583:exon12:c.A1288G:p.I430V	Score=469;Name=lod=107	NA	19p13.11	NA	NA	NA	NA	rs45467802	0.15	0.15	0.025	0.0485224	0.0437	0.0446	0.0331	0.0477	0.0695	0.15	0.11	0.1	0.21	0.1087	0.21	0.2	T	0.009	B	0.006	B	0.000	D	0.564	P	0.69	N	.	.	-1.061	T	0.000	T	0.052	1.736	11.76	3.48	0.602	1.729	7.550	1.735741	1.735741	0.35	0.047397	0.052716	NA	0.094	NA	11.1335364
539	1	197070521	197070521	C	G	exonic	ASPM	NA	nonsynonymous SNV	ASPM:NM_018136:exon18:c.G7860C:p.Q2620H	exonic	ENSG00000066279	NA	nonsynonymous SNV	ENSG00000066279:ENST00000367409:exon18:c.G7860C:p.Q2620H	NA	NA	1q31.3	NA	NA	NA	NA	rs12138336	0.03	0.03	0.025	0.028754	0.0825	0.001	0.0432	0.0023	0.0276	0.07	0.0017	0.04	0.002	0.0511	0.07	0.27	T	0.064	B	0.152	B	0.257	N	1.000	N	1.05	L	-0.6	T	-0.989	T	0.022	T	0.116	1.147	9.672	-8.33	-1.375	-1.094	6.539	1.146919	NA	0.12	0.069667	0.013164	NA	0.036	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=Primary_autosomal_recessive_microcephaly_5|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000020799.1|RCV000123704.1;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet|.;CLNDSDBID=NBK9587:C1837501:608716:ORPHA2512|.	11.1300664
539	16	84474484	84474484	G	A	exonic	ATP2C2	NA	nonsynonymous SNV	ATP2C2:NM_014861:exon14:c.G1231A:p.G411S	exonic	ENSG00000064270	NA	nonsynonymous SNV	ENSG00000064270:ENST00000262429:exon14:c.G1231A:p.G411S,ENSG00000064270:ENST00000416219:exon14:c.G1231A:p.G411S	Score=243;Name=lod=13	NA	16q24.1	NA	NA	NA	NA	rs2303853	0.05	0.05	0.035	0.0407348	0.0736	0.0258	0.0764	0.0061	0.044	0.07	0.02	0.09	0.01	0.0607	0.09	0.19	T	0.094	B	0.037	B	0.681	N	0.211	P	0.535	N	-0.41	T	-1.000	T	0.010	T	0.086	1.006	9.107	4.75	1.403	4.470	13.555	1.005591	NA	0.7	0.070163	0.018601	NA	0.029	NA	11.1288704
540	17	58121453	58121453	G	A	exonic	HEATR6	NA	nonsynonymous SNV	HEATR6:NM_022070:exon20:c.C3017T:p.S1006L	exonic	ENSG00000068097	NA	nonsynonymous SNV	ENSG00000068097:ENST00000585976:exon18:c.C2681T:p.S894L,ENSG00000068097:ENST00000184956:exon20:c.C3017T:p.S1006L	NA	NA	17q23.1	Score=845;Name=V$ATF_01	NA	NA	NA	rs16943991	0.1	0.1	0.106	0.0954473	0.0716	0.0625	0.0706	0.1967	0.0348	0.07	0.06	0.09	0.18	0.07	0.18	0.2	T	0.071	B	0.026	B	0.038	N	1.000	P	0.93	L	1.56	T	-1.054	T	0.000	T	0.096	0.961	8.919	4.19	1.321	4.156	12.914	0.960615	NA	0.25	0.06907	0.169995	NA	0.13	NA	11.1226634
540	2	220421417	220421417	C	G	exonic	OBSL1	NA	nonsynonymous SNV	OBSL1:NM_001173431:exon13:c.G4095C:p.E1365D,OBSL1:NM_015311:exon13:c.G4095C:p.E1365D	exonic	ENSG00000124006	NA	nonsynonymous SNV	ENSG00000124006:ENST00000265317:exon4:c.G792C:p.E264D,ENSG00000124006:ENST00000265318:exon12:c.G3819C:p.E1273D,ENSG00000124006:ENST00000373876:exon12:c.G3819C:p.E1273D,ENSG00000124006:ENST00000404537:exon13:c.G4095C:p.E1365D,ENSG00000124006:ENST00000603926:exon13:c.G4095C:p.E1365D	Score=385;Name=lod=49	NA	2q35	Score=845;Name=V$CREBP1_Q2	NA	NA	NA	rs1983210	0.7	0.7	0.715	0.724641	0.7366	0.7163	0.6873	0.6036	0.911	0.73	0.7	0.7	0.62	0.7461	0.76	0.38	T	0.846	P	0.759	P	.	.	0.000	P	2.215	M	-0.61	T	-0.967	T	0.000	T	0.246	1.802	11.98	2.11	0.954	0.902	10.104	1.801775	1.801775	0.03	0.7336	0.637725	ID=COSM442368;OCCURENCE=1(breast)	0.79	NA	11.1170334
541	17	43216472	43216472	A	G	exonic	ACBD4	NA	nonsynonymous SNV	ACBD4:NM_024722:exon8:c.A734G:p.Q245R,ACBD4:NM_001135705:exon9:c.A734G:p.Q245R,ACBD4:NM_001135706:exon9:c.A772G:p.R258G,ACBD4:NM_001135707:exon9:c.A724G:p.R242G,ACBD4:NM_001135704:exon11:c.A772G:p.R258G	exonic	ENSG00000181513	NA	nonsynonymous SNV	ENSG00000181513:ENST00000398322:exon8:c.A734G:p.Q245R,ENSG00000181513:ENST00000321854:exon9:c.A734G:p.Q245R,ENSG00000181513:ENST00000376955:exon9:c.A724G:p.R242G,ENSG00000181513:ENST00000586346:exon9:c.A772G:p.R258G,ENSG00000181513:ENST00000431281:exon11:c.A772G:p.R258G,ENSG00000181513:ENST00000591859:exon11:c.A772G:p.R258G	Score=435;Name=lod=78	NA	17q21.31	NA	NA	NA	NA	rs16939879	0.09	0.09	0.096	0.0882588	0.0805	0.0159	0.0504	0.205	0.0399	0.08	0.01	0.06	0.23	0.0691	0.23	0.21	T	0.0	B	0.002	B	0.384	N	0.357	P	.	.	2.19	T	-0.990	T	0.000	T	0.088	0.947	8.863	-6.01	-0.950	-0.984	9.755	0.947335	NA	0	0.075101	0.159481	NA	0.101	NA	11.1086324
541	10	55568972	55568972	T	G	exonic	PCDH15	NA	unknown	UNKNOWN	exonic	ENSG00000150275	NA	nonsynonymous SNV	ENSG00000150275:ENST00000395442:exon11:c.A1433C:p.E478A,ENSG00000150275:ENST00000395440:exon12:c.A1640C:p.E547A,ENSG00000150275:ENST00000395446:exon18:c.A2426C:p.E809A,ENSG00000150275:ENST00000395445:exon36:c.A4838C:p.E1613A	Score=329;Name=lod=29	NA	10q21.1	NA	NA	NA	NA	rs11003863	0.31	0.31	0.28	0.298123	0.1511	0.6796	0.2968	0.087	0.3425	0.16	0.73	0.26	0.1	0.2489	0.73	1	T	0.012	B	0.01	B	.	.	0.000	P	0.345	N	2.55	T	-0.924	T	0.000	T	0.114	2.582	14.59	4.56	2.159	4.736	5.579	2.581923	2.581923	0	0.160525	0.121492	NA	0.232	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000037010.1;CLNDSDB=.;CLNDSDBID=.	11.1061417
542	13	113479820	113479820	A	G	exonic	ATP11A	NA	nonsynonymous SNV	ATP11A:NM_015205:exon11:c.A949G:p.M317V,ATP11A:NM_032189:exon11:c.A949G:p.M317V	exonic	ENSG00000068650	NA	nonsynonymous SNV	ENSG00000068650:ENST00000283558:exon11:c.A949G:p.M317V,ENSG00000068650:ENST00000375630:exon11:c.A949G:p.M317V,ENSG00000068650:ENST00000375645:exon11:c.A949G:p.M317V,ENSG00000068650:ENST00000487903:exon11:c.A949G:p.M317V	Score=479;Name=lod=118	NA	13q34	Score=694;Name=V$PPARG_02	NA	NA	NA	rs368865	0.85	0.85	0.841	0.842252	0.7445	0.8661	0.8473	0.9894	0.7157	0.74	0.86	0.84	0.99	0.7648	0.99	0.68	T	0.0	B	0.0	B	0.001	N	1.000	P	-2.155	N	-2.43	D	-0.945	T	0.000	T	0.299	-0.672	1.065	5.14	1.176	3.156	10.121	-0.671815	NA	1	0.723605	0.944848	ID=COSM147717;OCCURENCE=1(stomach)	0.877	NA	11.1004284
542	22	26830285	26830285	A	G	exonic	ASPHD2	NA	nonsynonymous SNV	ASPHD2:NM_020437:exon2:c.A704G:p.N235S	exonic	ENSG00000128203	NA	nonsynonymous SNV	ENSG00000128203:ENST00000215906:exon2:c.A704G:p.N235S	Score=651;Name=lod=589	NA	22q12.1	Score=741;Name=V$PPARA_01	NA	NA	NA	rs34902186	0.04	0.04	0.032	0.0263578	0.0795	NA	0.049	0.0045	0.0123	0.09	NA	0.04	0.01	0.0614	0.094	0.78	T	0.006	B	0.019	B	0.000	N	0.000	P	1.04	L	1.0	T	-1.049	T	0.003	T	0.017	1.619	11.37	3.49	0.656	4.499	8.031	1.618941	1.618941	0.21	0.094302	0.014753	NA	0.043	NA	11.0981314
542	2	231036860	231036860	C	T	exonic	SP110	NA	nonsynonymous SNV	SP110:NM_004509:exon16:c.G1737A:p.M579I,SP110:NM_080424:exon16:c.G1737A:p.M579I	exonic	ENSG00000135899	NA	nonsynonymous SNV	ENSG00000135899:ENST00000258381:exon16:c.G1737A:p.M579I,ENSG00000135899:ENST00000358662:exon16:c.G1737A:p.M579I	Score=309;Name=lod=24	NA	2q37.1	NA	NA	NA	NA	rs3948463	0.05	0.05	0.038	0.0395367	0.0924	0.001	0.0476	0.0076	0.0624	0.09	0.0017	0.06	0.01	0.0606	0.09	0.46	T	0.046	B	0.008	B	.	.	1.000	D	-0.225	N	-2.18	D	-1.040	T	0.019	T	0.095	0.054	4.293	2.68	0.812	-0.052	7.669	0.053612	NA	0.19	0.082558	0.016795	NA	0.072	NA	11.0977754
542	19	48244401	48244401	G	A	exonic	EHD2	NA	synonymous SNV	EHD2:NM_014601:exon6:c.G1344A:p.K448K	exonic	ENSG00000024422	NA	synonymous SNV	ENSG00000024422:ENST00000538399:exon5:c.G936A:p.K312K,ENSG00000024422:ENST00000263277:exon6:c.G1344A:p.K448K	Score=541;Name=lod=210	NA	19q13.33	Score=904;Name=V$AP1_Q4	NA	NA	NA	rs35910701	0.1	0.1	0.091	0.0914537	0.2187	0.006	0.1052	0.0416	0.1063	0.21	0.01	0.12	0.04	0.1547	0.21	0.29	T	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.106	T	0.000	T	.	1.223	9.962	4.13	2.024	2.995	14.267	1.223109	NA	0.14	0.195698	0.070813	NA	0.051	NA	11.0975686
542	4	177082069	177082069	G	C	exonic	WDR17	NA	nonsynonymous SNV	WDR17:NM_181265:exon20:c.G2666C:p.C889S,WDR17:NM_170710:exon21:c.G2738C:p.C913S	exonic	ENSG00000150627	NA	nonsynonymous SNV	ENSG00000150627:ENST00000393643:exon20:c.G2666C:p.C889S,ENSG00000150627:ENST00000507824:exon20:c.G2687C:p.C896S,ENSG00000150627:ENST00000508596:exon20:c.G2666C:p.C889S,ENSG00000150627:ENST00000280190:exon21:c.G2738C:p.C913S	Score=482;Name=lod=121	NA	4q34.2	NA	NA	NA	NA	rs7693453	0.18	0.18	0.173	0.192093	0.2545	0.1677	0.1354	0.1422	0.2607	0.25	0.15	0.16	0.12	0.2218	0.26	0.53	T	0.727	P	0.165	B	0.000	D	0.000	P	1.845	L	0.52	T	-1.099	T	0.000	T	0.374	0.497	6.694	2.79	0.619	4.116	13.571	0.496597	NA	0.74	0.26	0.163414	NA	0.116	NA	11.0970334
542	2	238990388	238990388	G	A	exonic	SCLY	NA	nonsynonymous SNV	SCLY:NM_016510:exon5:c.G547A:p.A183T	exonic	ENSG00000132330	NA	nonsynonymous SNV	ENSG00000132330:ENST00000450965:exon1:c.G13A:p.A5T,ENSG00000132330:ENST00000413463:exon3:c.G265A:p.A89T,ENSG00000132330:ENST00000422984:exon3:c.G241A:p.A81T,ENSG00000132330:ENST00000254663:exon5:c.G547A:p.A183T,ENSG00000132330:ENST00000409736:exon5:c.G523A:p.A175T,ENSG00000132330:ENST00000555827:exon5:c.G523A:p.A175T,ENSG00000132330:ENST00000373332:exon6:c.G277A:p.A93T	NA	NA	2q37.3	NA	NA	NA	NA	rs3210400	0.3	0.3	0.25	0.253994	0.4563	0.2321	0.438	0.0393	0.228	0.46	0.21	0.43	0.04	0.3571	0.46	0	D	0.775	P	0.593	P	0.075	N	0.004	P	1.355	L	1.98	T	-0.877	T	0.000	T	0.404	2.296	13.64	4.96	1.464	4.874	10.015	2.296062	2.296062	0.02	0.423488	0.09419	NA	0.319	NA	11.0964454
542	2	69659126	69659126	A	T	exonic	NFU1	NA	nonsynonymous SNV	NFU1:NM_001002755:exon2:c.T74A:p.M25K,NFU1:NM_015700:exon2:c.T2A:p.M1K	exonic	ENSG00000169599	NA	nonsynonymous SNV	ENSG00000169599:ENST00000303698:exon2:c.T2A:p.M1K,ENSG00000169599:ENST00000410022:exon2:c.T74A:p.M25K,ENSG00000169599:ENST00000419370:exon2:c.T2A:p.M1K,ENSG00000169599:ENST00000438184:exon2:c.T2A:p.M1K	NA	NA	2p13.3	Score=910;Name=V$MEIS1_01	NA	NA	NA	rs4453725	0.31	0.31	0.301	0.317093	0.4185	0.2103	0.3818	0.2526	0.364	0.42	0.19	0.38	0.23	0.3928	0.43	0.01	D	0.039	B	0.019	B	0.865	N	0.000	P	0.345	N	0.01	T	-0.987	T	0.000	T	0.275	-0.031	3.853	3.94	1.066	0.978	6.884	-0.031371	NA	0	0.42686	0.2803	ID=COSM1130747;OCCURENCE=1(prostate)	0.399	NA	11.0951734
543	1	150280550	150280550	G	A	exonic	MRPS21	NA	nonsynonymous SNV	MRPS21:NM_018997:exon2:c.G152A:p.R51Q,MRPS21:NM_031901:exon3:c.G152A:p.R51Q	exonic	ENSG00000187145	NA	nonsynonymous SNV	ENSG00000187145:ENST00000369084:exon2:c.G152A:p.R51Q,ENSG00000187145:ENST00000309092:exon3:c.G152A:p.R51Q	Score=556;Name=lod=243	NA	1q21.2	NA	NA	NA	NA	rs4845	0.09	0.09	0.093	0.0878594	0.0706	0.001	0.0519	0.2337	0.0235	0.08	0.0017	0.04	0.25	0.0824	0.25	0.79	T	0.011	B	0.012	B	.	.	0.998	P	.	.	1.46	T	-1.020	T	0.015	T	0.197	1.682	11.58	4.94	2.572	1.483	9.104	1.681805	1.681805	0.52	0.089186	0.191784	NA	0.101	NA	11.0911474
543	1	167865871	167865871	G	A	exonic	ADCY10	NA	nonsynonymous SNV	ADCY10:NM_001167749:exon4:c.C242T:p.T81M,ADCY10:NM_018417:exon7:c.C701T:p.T234M	exonic	ENSG00000143199	NA	nonsynonymous SNV	ENSG00000143199:ENST00000545172:exon4:c.C242T:p.T81M,ENSG00000143199:ENST00000367848:exon7:c.C425T:p.T142M,ENSG00000143199:ENST00000367851:exon7:c.C701T:p.T234M	Score=389;Name=lod=51	NA	1q24.2	NA	NA	NA	NA	rs16859886	0.08	0.08	0.084	0.0758786	0.0905	NA	0.0735	0.1664	0.0184	0.08	NA	0.08	0.16	0.0719	0.16	0.22	T	0.0	B	0.0	B	0.001	N	1.000	P	-0.895	N	1.58	T	-1.010	T	0.011	T	0.185	-1.274	0.044	5.32	0.959	2.046	8.373	-1.274499	NA	0.83	0.080116	0.153427	NA	0.08	NA	11.0908174
543	22	42538508	42538508	A	G	ncRNA_exonic	CYP2D7P1	NA	NA	NA	exonic	ENSG00000205702	NA	unknown	UNKNOWN	NA	NA	22q13.2	NA	NA	NA	NA	rs3021082	0.36	0.36	0.064	0.38778	0.2942	0.5694	0.2277	0.4887	0.274	0.27	0.51	0.3	0.4	0.45	0.51	0	D	0.982	D	0.958	D	0.081	N	1.000	P	.	.	.	.	-0.905	T	0.000	T	.	0.165	4.886	3.82	1.730	3.001	9.209	0.164755	NA	0	NA	NA	NA	NA	NA	11.0891333
543	15	90347814	90347814	G	A	exonic	ANPEP	NA	nonsynonymous SNV	ANPEP:NM_001150:exon5:c.C932T:p.A311V	exonic	ENSG00000166825	NA	nonsynonymous SNV	ENSG00000166825:ENST00000300060:exon5:c.C932T:p.A311V	NA	NA	15q26.1	Score=777;Name=V$MYOGNF1_01	NA	NA	NA	rs17240268	0.08	0.08	0.079	0.071885	0.0924	0.002	0.0576	0.1362	0.046	0.09	0.0035	0.06	0.16	0.0722	0.16	0.27	T	0.907	P	0.509	P	0.056	N	1.000	P	2.605	M	4.1	T	-0.990	T	0.000	T	0.024	2.777	15.25	-2.78	-0.056	-0.465	8.837	2.77699	2.77699	0.22	0.081065	0.136818	NA	0.145	NA	11.0876684
544	19	33605312	33605312	T	C	exonic	GPATCH1	NA	nonsynonymous SNV	GPATCH1:NM_018025:exon15:c.T2183C:p.L728S	exonic	ENSG00000076650	NA	nonsynonymous SNV	ENSG00000076650:ENST00000170564:exon15:c.T2183C:p.L728S	NA	NA	19q13.11	NA	Name=PRDM1_(Val90),JunD	Name=7	NA	rs10421769	0.7	0.7	0.72	0.770168	0.3489	0.9901	0.7017	0.9697	0.7556	0.35	0.99	0.62	0.97	0.5403	0.99	0.75	T	0.001	B	0.0	B	0.334	N	1.000	P	-1.39	N	2.25	T	-0.980	T	0.000	T	0.018	-0.074	3.637	5.32	1.248	2.751	11.675	-0.074302	NA	0.26	0.362907	0.874035	NA	0.601	NA	11.0812264
544	22	42610099	42610099	T	C	exonic	TCF20	NA	nonsynonymous SNV	TCF20:NM_005650:exon1:c.A1213G:p.M405V,TCF20:NM_181492:exon1:c.A1213G:p.M405V	exonic	ENSG00000100207	NA	nonsynonymous SNV	ENSG00000100207:ENST00000335626:exon1:c.A1213G:p.M405V,ENSG00000100207:ENST00000359486:exon1:c.A1213G:p.M405V	Score=625;Name=lod=463	NA	22q13.2	NA	NA	NA	NA	rs34030679	0.07	0.07	0.077	0.0860623	0.0815	0.0308	0.062	0.1324	0.1022	0.07	0.02	0.07	0.14	0.0796	0.14	1	T	0.0	B	0.0	B	0.000	N	0.000	P	1.245	L	1.53	T	-1.028	T	0.000	T	0.112	-1.837	0.009	3.74	1.084	1.197	5.668	-1.837371	NA	1	0.091628	0.137767	NA	0.094	NA	11.0806054
544	10	129906980	129906980	C	T	exonic	MKI67	NA	nonsynonymous SNV	MKI67:NM_001145966:exon12:c.G2044A:p.G682S,MKI67:NM_002417:exon13:c.G3124A:p.G1042S	exonic	ENSG00000148773	NA	nonsynonymous SNV	ENSG00000148773:ENST00000368653:exon12:c.G2044A:p.G682S,ENSG00000148773:ENST00000368654:exon13:c.G3124A:p.G1042S	NA	NA	10q26.2	NA	NA	NA	NA	rs2152143	0.21	0.21	0.201	0.190495	0.2704	0.1181	0.3156	0.1172	0.1933	0.27	0.15	0.33	0.1	0.239	0.33	0.73	T	0.975	D	0.561	P	.	.	1.000	P	0.97	L	4.5	T	-1.018	T	0.000	T	0.031	1.117	9.554	-4.11	-1.001	-1.344	8.078	1.116707	NA	0.8	0.247442	0.130731	ID=COSM146357;OCCURENCE=1(stomach)	0.152	NA	11.0764914
545	3	167023738	167023738	G	C	exonic	ZBBX	NA	nonsynonymous SNV	ZBBX:NM_001199201:exon17:c.C1418G:p.A473G,ZBBX:NM_001199202:exon17:c.C1331G:p.A444G,ZBBX:NM_024687:exon17:c.C1418G:p.A473G	exonic	ENSG00000169064	NA	nonsynonymous SNV	ENSG00000169064:ENST00000307529:exon14:c.C1418G:p.A473G,ENSG00000169064:ENST00000392767:exon14:c.C1418G:p.A473G,ENSG00000169064:ENST00000455345:exon16:c.C1418G:p.A473G,ENSG00000169064:ENST00000392764:exon17:c.C1331G:p.A444G,ENSG00000169064:ENST00000392766:exon17:c.C1418G:p.A473G	Score=251;Name=lod=14	NA	3q26.1	NA	NA	NA	NA	rs13096767	0.33	0.33	0.326	0.334665	0.4195	0.1835	0.353	0.3548	0.363	0.41	0.18	0.37	0.37	0.4167	0.42	0.2	T	0.999	D	0.994	D	0.037	N	0.975	P	1.32	L	2.96	T	-0.839	T	0.000	T	0.138	0.867	8.513	4.76	2.332	0.607	13.640	0.866911	NA	0.16	0.424982	0.375763	ID=COSM149508,COSM149509;OCCURENCE=1(stomach)	0.457	NA	11.0721514
545	10	29578084	29578084	A	G	exonic	LYZL1	NA	nonsynonymous SNV	LYZL1:NM_032517:exon1:c.A38G:p.K13R	exonic	ENSG00000120563	NA	nonsynonymous SNV	ENSG00000120563:ENST00000375500:exon1:c.A38G:p.K13R	Score=317;Name=lod=26	NA	10p12.1	NA	NA	NA	NA	rs2532753	0.65	0.65	0.612	0.676917	0.6153	0.7897	0.7421	0.6006	0.681	0.6	0.8	0.64	0.58	0.6467	0.8	0.4	T	0.877	P	0.461	P	0.000	N	0.992	P	.	.	-0.36	T	-0.957	T	0.000	T	0.136	1.983	12.59	4.04	2.058	2.028	9.661	1.982645	1.982645	0.5	NA	NA	NA	0.514	NA	11.0713334
545	8	31024654	31024654	T	C	exonic	WRN	NA	nonsynonymous SNV	WRN:NM_000553:exon34:c.T4099C:p.C1367R	exonic	ENSG00000165392	NA	nonsynonymous SNV	ENSG00000165392:ENST00000298139:exon34:c.T4099C:p.C1367R	NA	NA	8p12	Score=866;Name=V$OCT1_06	NA	NA	NA	rs1346044	0.18	0.18	0.172	0.192692	0.2664	0.1042	0.1729	0.1475	0.2832	0.26	0.1	0.18	0.16	0.2416	0.26	0.1	T	0.744	P	0.289	B	0.365	N	0.055	P	2.14	M	0.93	T	-1.067	T	0.000	T	0.107	0.767	8.055	2.45	0.406	0.579	5.606	0.766747	NA	0.02	0.255814	0.171811	NA	0.152	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118880.3;CLNDSDB=.;CLNDSDBID=.	11.0695194
545	6	126661502	126661502	G	T	exonic	CENPW	NA	nonsynonymous SNV	CENPW:NM_001012507:exon1:c.G83T:p.R28L	exonic	ENSG00000203760	NA	nonsynonymous SNV	ENSG00000203760:ENST00000368325:exon1:c.G83T:p.R28L,ENSG00000203760:ENST00000368326:exon1:c.G83T:p.R28L,ENSG00000203760:ENST00000368328:exon1:c.G83T:p.R28L	NA	NA	6q22.32	NA	Name=HA-E2F1,Pol2-4H8,Pol2,GATA-1,Pol2(b),SETDB1	Name=148	NA	rs41285260	0.05	0.05	0.059	0.0515176	0.1093	NA	0.0735	0.025	0.0654	0.1	NA	0.08	0.02	0.0679	0.1	0.01	D	0.001	B	0.008	B	0.744	N	1.000	N	.	.	1.94	T	-0.929	T	0.012	T	0.132	2.688	14.95	-2.24	-0.711	-0.203	3.739	2.687974	2.687974	0	0.088605	0.032229	NA	0.058	NA	11.0675284
546	22	35481493	35481493	C	T	exonic	ISX	NA	nonsynonymous SNV	ISX:NM_001008494:exon4:c.C545T:p.T182M	exonic	ENSG00000175329	NA	nonsynonymous SNV	ENSG00000175329:ENST00000308700:exon4:c.C545T:p.T182M,ENSG00000175329:ENST00000404699:exon5:c.C545T:p.T182M	NA	NA	22q12.3	NA	NA	NA	NA	rs61735502	0.05	0.05	0.049	0.0654952	0.0994	0.0129	0.049	0.0507	0.1166	0.1	0.01	0.05	0.03	0.0806	0.1	0.23	T	0.007	B	0.003	B	0.865	N	1.000	P	0.83	L	-2.67	D	-0.903	T	0.027	T	0.058	1.485	10.91	-9.08	-1.704	-1.783	9.362	1.484734	1.484734	0.02	0.09314	0.059464	NA	0.065	NA	11.0601934
546	9	136555629	136555629	T	C	exonic	SARDH	NA	nonsynonymous SNV	SARDH:NM_001134707:exon16:c.A1942G:p.M648V,SARDH:NM_007101:exon16:c.A1942G:p.M648V	exonic	ENSG00000123453	NA	nonsynonymous SNV	ENSG00000123453:ENST00000371868:exon4:c.A226G:p.M76V,ENSG00000123453:ENST00000422262:exon15:c.A1438G:p.M480V,ENSG00000123453:ENST00000371872:exon16:c.A1942G:p.M648V,ENSG00000123453:ENST00000439388:exon16:c.A1942G:p.M648V	Score=343;Name=lod=33	NA	9q34.2	NA	Name=CTCF	NA	NA	rs886016	0.53	0.53	0.546	0.554513	0.4394	0.4444	0.4914	0.8404	0.4448	0.45	0.44	0.48	0.82	0.4415	0.82	0.65	T	0.0	B	0.0	B	0.000	N	0.000	P	-2.285	N	-0.59	T	-0.951	T	0.000	T	0.073	-0.731	0.874	5.02	1.114	2.882	8.554	-0.731017	NA	1	0.393488	0.759646	NA	0.514	NA	11.0589454
547	6	38773293	38773293	G	A	exonic	DNAH8	NA	nonsynonymous SNV	DNAH8:NM_001206927:exon23:c.G3071A:p.G1024E	exonic	ENSG00000124721	NA	nonsynonymous SNV	ENSG00000124721:ENST00000441566:exon19:c.G2420A:p.G807E,ENSG00000124721:ENST00000359357:exon21:c.G2420A:p.G807E,ENSG00000124721:ENST00000327475:exon22:c.G3035A:p.G1012E,ENSG00000124721:ENST00000449981:exon23:c.G3071A:p.G1024E	Score=251;Name=lod=14	NA	6p21.2	Score=754;Name=V$MYOGNF1_01	NA	NA	NA	rs874808	0.48	0.48	0.447	0.47504	0.3817	0.6994	0.5821	0.3245	0.4673	0.39	0.69	0.55	0.33	0.4585	0.69	1	T	0.0	B	0.0	B	0.088	N	1.000	P	0.69	N	1.96	T	-0.979	T	0.011	T	0.045	-0.46	1.874	4.22	1.018	2.661	7.081	-0.459527	NA	1	0.43814	0.338629	NA	0.543	NA	11.0549934
547	7	141673345	141673345	C	G	exonic	TAS2R38	NA	nonsynonymous SNV	TAS2R38:NM_176817:exon1:c.G145C:p.A49P	exonic	ENSG00000257138	NA	nonsynonymous SNV	ENSG00000257138:ENST00000547270:exon1:c.G145C:p.A49P	NA	Name=Bitter taste response	7q34	NA	NA	NA	NA	rs713598	0.53	0.53	0.483	0.504792	0.4225	0.6756	0.6585	0.475	0.3446	0.42	0.65	0.61	0.51	0.4459	0.65	0.38	T	0.001	B	0.005	B	0.005	N	0.945	P	-2.08	N	5.72	T	-1.116	T	0.000	T	0.165	-0.698	0.978	5.1	1.402	2.468	11.663	-0.697866	NA	1	0.410465	0.469814	NA	0.442	CLINSIG=drug-response;CLNDBN=Phenylthiocarbamide_tasting;CLNREVSTAT=single;CLNACC=RCV000003038.1;CLNDSDB=MedGen;CLNDSDBID=C1868398	11.0544684
547	4	2951804	2951804	A	G	exonic	NOP14	NA	nonsynonymous SNV	NOP14:NM_003703:exon8:c.T1139C:p.L380S	exonic	ENSG00000087269	NA	nonsynonymous SNV	ENSG00000087269:ENST00000314262:exon8:c.T1139C:p.L380S,ENSG00000087269:ENST00000398071:exon8:c.T1139C:p.L380S,ENSG00000087269:ENST00000416614:exon8:c.T1139C:p.L380S,ENSG00000087269:ENST00000502735:exon8:c.T1139C:p.L380S	Score=340;Name=lod=32	NA	4p16.3	NA	NA	NA	NA	rs2515960	0.42	0.42	0.41	0.407548	0.4433	0.1915	0.415	0.6815	0.2178	0.44	0.18	0.42	0.67	0.4067	0.67	0	D	0.0	B	0.0	B	0.002	N	0.988	P	-2.66	N	1.61	T	-0.971	T	0.000	T	0.11	-0.249	2.803	5.43	1.309	3.876	13.176	-0.248704	NA	1	0.429535	0.626645	NA	0.341	NA	11.0537984
547	21	47558552	47558552	G	A	exonic	FTCD	NA	nonsynonymous SNV	FTCD:NM_006657:exon12:c.C1313T:p.A438V,FTCD:NM_206965:exon12:c.C1313T:p.A438V	exonic	ENSG00000160282	NA	nonsynonymous SNV	ENSG00000160282:ENST00000291670:exon12:c.C1313T:p.A438V,ENSG00000160282:ENST00000359679:exon12:c.C1313T:p.A438V,ENSG00000160282:ENST00000397746:exon12:c.C1313T:p.A438V,ENSG00000160282:ENST00000397748:exon12:c.C1313T:p.A438V	NA	NA	21q22.3	NA	NA	NA	NA	rs61735841	0.04	0.04	0.043	0.0289537	0.0954	0.0069	0.0331	0.0068	0.0102	0.09	0.01	0.04	0.01	0.0826	0.1	0.17	T	0.281	B	0.067	B	0.023	N	1.000	D	1.735	L	0.83	T	-1.152	T	0.004	T	0.142	1.998	12.64	3.47	0.913	1.492	9.687	1.998345	1.998345	0.2	0.101721	0.021719	NA	0.022	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000081447.1;CLNDSDB=.;CLNDSDBID=.	11.0536124
547	14	93398031	93398031	G	C	exonic	CHGA	NA	nonsynonymous SNV	CHGA:NM_001275:exon6:c.G792C:p.E264D	exonic	ENSG00000100604	NA	nonsynonymous SNV	ENSG00000100604:ENST00000216492:exon6:c.G792C:p.E264D	NA	NA	14q32.12	NA	NA	NA	NA	rs9658655	0.15	0.15	0.149	0.183506	0.0736	0.2391	0.1859	0.2171	0.1922	0.07	0.21	0.17	0.22	0.1277	0.24	0.25	T	0.872	P	0.535	P	0.132	N	0.000	P	2.175	M	4.68	T	-0.763	T	0.000	T	0.052	3.15	16.53	3.98	1.940	0.676	13.148	3.149949	3.149949	0.28	0.083605	0.179528	NA	0.174	NA	11.0484284
547	8	52325767	52325767	T	G	exonic	PXDNL	NA	nonsynonymous SNV	PXDNL:NM_144651:exon15:c.A1847C:p.D616A	exonic	ENSG00000147485	NA	nonsynonymous SNV	ENSG00000147485:ENST00000356297:exon15:c.A1847C:p.D616A,ENSG00000147485:ENST00000543296:exon15:c.A1847C:p.D616A	Score=471;Name=lod=109	NA	8q11.22	NA	NA	NA	NA	rs16916207	0.16	0.16	0.164	0.158746	0.0865	0.2768	0.0793	0.1921	0.1227	0.09	0.27	0.08	0.19	0.1113	0.27	0.01	D	0.129	B	0.046	B	.	.	0.995	P	1.39	L	-0.06	T	-1.083	T	0.000	T	0.279	1.558	11.16	3.61	0.674	4.320	8.613	1.557645	1.557645	0.01	0.087188	0.181842	NA	0.116	NA	11.0483454
548	6	29912856	29912856	A	T	exonic	HLA-A	NA	nonsynonymous SNV	HLA-A:NM_001242758:exon6:c.A1033T:p.T345S,HLA-A:NM_002116:exon6:c.A1033T:p.T345S	exonic	ENSG00000206503	NA	nonsynonymous SNV	ENSG00000206503:ENST00000376806:exon6:c.A1051T:p.T351S,ENSG00000206503:ENST00000376809:exon6:c.A1033T:p.T345S,ENSG00000206503:ENST00000396634:exon8:c.A1033T:p.T345S	NA	NA	6p22.1	NA	Name=Pol2-4H8	NA	NA	rs2231119	NA	NA	0.522	0.686502	0.6342	0.6885	0.7752	0.73	0.6166	NA	NA	NA	NA	0.6563	0.62	0	D	0.0	B	0.001	B	0.002	N	1.000	P	.	.	4.97	T	-0.921	T	0.001	T	0.451	0.595	7.208	-6.63	-1.927	-3.514	3.845	0.594792	NA	1	NA	NA	ID=COSM1621366;OCCURENCE=1(liver)	0.529	NA	11.0428334
548	8	10467124	10467124	G	C	exonic	RP1L1	NA	nonsynonymous SNV	RP1L1:NM_178857:exon4:c.C4484G:p.P1495R	exonic	ENSG00000183638	NA	nonsynonymous SNV	ENSG00000183638:ENST00000382483:exon4:c.C4484G:p.P1495R	NA	NA	8p23.1	NA	NA	NA	NA	rs4841399	0.29	0.29	0.259	0.281749	0.2555	0.3938	0.353	0.2511	0.184	0.26	0.42	0.3	0.2	0.2945	0.42	0.05	D	0.851	P	0.314	B	0.066	N	1.000	P	0.345	N	3.69	T	-0.970	T	0.000	T	0.051	1.055	9.308	-5.06	-1.450	-1.416	1.985	1.054817	NA	0.03	0.241035	0.25	ID=COSM453785;OCCURENCE=1(breast)	0.217	NA	11.0422984
548	5	178415937	178415937	A	G	exonic	GRM6	NA	synonymous SNV	GRM6:NM_000843:exon6:c.T1353C:p.N451N	exonic	ENSG00000113262	NA	synonymous SNV	ENSG00000113262:ENST00000231188:exon6:c.T1353C:p.N451N,ENSG00000113262:ENST00000517717:exon7:c.T1353C:p.N451N	Score=463;Name=lod=102	NA	5q35.3	Score=763;Name=V$PAX6_01	NA	NA	NA	rs2067011	0.53	0.53	0.483	0.506989	0.5547	0.5913	0.5317	0.388	0.5143	0.55	0.59	0.5	0.45	0.5328	0.59	0	D	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.922	T	0.000	T	.	1.769	11.88	-4.44	-0.676	-1.561	15.244	1.769401	1.769401	0	0.537791	0.409896	NA	0.551	CLINSIG=untested;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000086024.1;CLNDSDB=.;CLNDSDBID=.	11.0413756
548	4	3215835	3215835	T	C	exonic	HTT	NA	nonsynonymous SNV	HTT:NM_002111:exon50:c.T6925C:p.Y2309H	exonic	ENSG00000197386	NA	nonsynonymous SNV	ENSG00000197386:ENST00000355072:exon50:c.T6925C:p.Y2309H	Score=472;Name=lod=110	NA	4p16.3	Score=753;Name=V$TCF11MAFG_01	NA	NA	NA	rs362331	0.46	0.46	0.427	0.441294	0.4334	0.3859	0.4294	0.5862	0.319	0.44	0.38	0.44	0.57	0.4386	0.57	0.58	T	0.0	B	0.0	B	0.000	N	0.999	P	-1.355	N	3.59	T	-1.024	T	0.000	T	0.275	1.119	9.562	5.7	1.427	3.175	8.214	1.118641	NA	0.93	0.420295	0.565019	ID=COSM447793;OCCURENCE=1(breast)	0.536	NA	11.0410384
548	7	82453708	82453708	A	C	exonic	PCLO	NA	nonsynonymous SNV	PCLO:NM_014510:exon19:c.T14440G:p.S4814A,PCLO:NM_033026:exon19:c.T14440G:p.S4814A	exonic	ENSG00000186472	NA	nonsynonymous SNV	ENSG00000186472:ENST00000333891:exon19:c.T14440G:p.S4814A,ENSG00000186472:ENST00000423517:exon19:c.T14440G:p.S4814A	Score=513;Name=lod=162	NA	7q21.11	NA	NA	NA	NA	rs2522833	0.42	0.42	0.41	0.402556	0.4324	0.6865	0.4164	0.0424	0.5562	0.45	0.7	0.41	0.07	0.4431	0.7	0	D	0.013	B	0.118	B	.	.	0.000	P	-0.145	N	1.01	T	-0.971	T	0.000	T	0.137	2.174	13.22	5.72	2.179	5.108	15.993	2.173542	2.173542	1	0.419207	0.102551	NA	0.297	NA	11.0386264
548	6	26108168	26108168	G	A	exonic	HIST1H1T	NA	nonsynonymous SNV	HIST1H1T:NM_005323:exon1:c.C154T:p.L52F	exonic	ENSG00000187475	NA	nonsynonymous SNV	ENSG00000187475:ENST00000338379:exon1:c.C154T:p.L52F	NA	NA	6p22.2	NA	NA	NA	NA	rs2051542	0.24	0.24	0.213	0.217053	0.0865	0.5506	0.2133	0.0734	0.2045	0.1	0.62	0.15	0.09	0.1469	0.62	0	D	0.997	D	0.968	D	0.034	N	1.000	P	2.14	M	1.5	T	-0.991	T	0.092	T	0.132	3.183	16.65	0.107	0.088	0.451	8.973	3.183196	3.183196	0	0.062674	0.089877	NA	0.116	NA	11.0372594
548	5	180057293	180057293	T	C	exonic	FLT4	NA	nonsynonymous SNV	FLT4:NM_002020:exon4:c.A445G:p.N149D,FLT4:NM_182925:exon4:c.A445G:p.N149D	exonic	ENSG00000037280	NA	nonsynonymous SNV	ENSG00000037280:ENST00000261937:exon4:c.A445G:p.N149D,ENSG00000037280:ENST00000393347:exon4:c.A445G:p.N149D,ENSG00000037280:ENST00000502649:exon4:c.A445G:p.N149D	Score=536;Name=lod=202	NA	5q35.3	Score=869;Name=V$ELK1_02	NA	NA	NA	rs34221241	0.05	0.05	0.053	0.0389377	0.1243	0.001	0.0331	0.0045	0.0409	0.13	0.0017	0.04	0.01	0.0751	0.13	0.55	T	0.012	B	0.005	B	.	.	0.473	P	1.1	L	1.12	T	-1.043	T	0.001	T	0.007	1.061	9.334	2.96	0.440	1.625	3.930	1.061203	NA	0.17	0.097465	0.021818	NA	0.014	NA	11.0364684
548	10	121436286	121436286	C	T	exonic	BAG3	NA	nonsynonymous SNV	BAG3:NM_004281:exon4:c.C1220T:p.P407L	exonic	ENSG00000151929	NA	nonsynonymous SNV	ENSG00000151929:ENST00000369085:exon4:c.C1220T:p.P407L	NA	NA	10q26.11	NA	NA	NA	NA	rs3858340	0.16	0.16	0.136	0.155551	0.0964	0.253	0.1744	0.1664	0.0879	0.09	0.24	0.13	0.16	0.1141	0.24	0.06	T	0.191	B	0.1	B	0.279	N	0.226	P	0.895	L	-0.21	T	-1.093	T	0.000	T	0.068	2.558	14.51	5.73	2.861	4.449	20.260	2.558206	2.558206	0.03	0.087674	0.170449	NA	0.145	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=mult|single;CLNACC=RCV000037885.2|RCV000123816.1;CLNDSDB=.|.;CLNDSDBID=.|.	11.0351594
549	17	57963537	57963537	A	G	exonic	TUBD1	NA	nonsynonymous SNV	TUBD1:NM_001193609:exon3:c.T227C:p.M76T,TUBD1:NM_001193610:exon3:c.T227C:p.M76T,TUBD1:NM_001193611:exon3:c.T227C:p.M76T,TUBD1:NM_016261:exon3:c.T227C:p.M76T	exonic	ENSG00000108423	NA	nonsynonymous SNV	ENSG00000108423:ENST00000376094:exon2:c.T227C:p.M76T,ENSG00000108423:ENST00000590498:exon2:c.T26C:p.M9T,ENSG00000108423:ENST00000592426:exon2:c.T227C:p.M76T,ENSG00000108423:ENST00000593110:exon2:c.T26C:p.M9T,ENSG00000108423:ENST00000325752:exon3:c.T227C:p.M76T,ENSG00000108423:ENST00000340993:exon3:c.T227C:p.M76T,ENSG00000108423:ENST00000394239:exon3:c.T227C:p.M76T,ENSG00000108423:ENST00000591548:exon3:c.T227C:p.M76T	Score=591;Name=lod=335	Name=Inflammatory bowel disease	17q23.1	Score=895;Name=V$PBX1_02	NA	NA	NA	rs1292053	0.49	0.49	0.503	0.48123	0.4175	0.5754	0.4597	0.5204	0.4121	0.42	0.6	0.44	0.53	0.4462	0.6	0.65	T	0.0	B	0.0	B	0.000	N	0.000	P	-1.095	N	-0.47	T	-0.926	T	0.000	T	0.082	-0.355	2.326	4.1	0.476	4.164	11.301	-0.354555	NA	1	0.436163	0.481843	ID=COSM148311;OCCURENCE=1(stomach)	0.507	NA	11.0334704
549	11	17035718	17035718	A	G	exonic	PLEKHA7	NA	synonymous SNV	PLEKHA7:NM_175058:exon2:c.T117C:p.H39H	exonic	ENSG00000166689	NA	nonsynonymous SNV	ENSG00000166689:ENST00000532079:exon2:c.T53C:p.I18T	Score=599;Name=lod=362	NA	11p15.1	NA	Name=USF-1,USF2	Name=12	NA	rs61881311	0.72	0.72	0.682	0.707867	0.6143	0.9653	0.7334	0.5408	0.7464	0.61	0.97	0.71	0.59	0.6942	0.97	0	D	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.061	T	0.000	T	.	0.886	8.595	3.15	0.316	1.878	8.259	0.8856	NA	NA	0.660025	0.5684	NA	NA	NA	11.031475
549	8	52321686	52321686	C	T	exonic	PXDNL	NA	nonsynonymous SNV	PXDNL:NM_144651:exon17:c.G2498A:p.S833N	exonic	ENSG00000147485	NA	nonsynonymous SNV	ENSG00000147485:ENST00000522628:exon1:c.G296A:p.S99N,ENSG00000147485:ENST00000356297:exon17:c.G2498A:p.S833N,ENSG00000147485:ENST00000543296:exon17:c.G2498A:p.S833N	Score=295;Name=lod=21	NA	8q11.22	NA	NA	NA	NA	rs11985241	0.15	0.15	0.14	0.153954	0.0905	0.2768	0.0778	0.1725	0.1217	0.09	0.27	0.08	0.17	0.1283	0.27	0.16	T	0.118	B	0.048	B	0.000	D	0.970	P	1.03	L	-0.71	T	-1.080	T	0.000	T	0.016	0.084	4.452	2.63	0.553	5.229	9.853	0.083708	NA	0.08	0.086186	0.161841	NA	0.087	NA	11.0283474
549	2	20189015	20189015	T	C	exonic	WDR35	NA	nonsynonymous SNV	WDR35:NM_001006657:exon2:c.A53G:p.Q18R,WDR35:NM_020779:exon2:c.A53G:p.Q18R	exonic	ENSG00000118965	NA	nonsynonymous SNV	ENSG00000118965:ENST00000281405:exon2:c.A53G:p.Q18R,ENSG00000118965:ENST00000345530:exon2:c.A53G:p.Q18R,ENSG00000118965:ENST00000414212:exon2:c.A53G:p.Q18R	Score=652;Name=lod=597	NA	2p24.1	NA	NA	NA	NA	rs1060742	0.1	0.1	0.087	0.11861	0.1123	0.1736	0.1196	0.0038	0.2229	0.11	0.17	0.12	0.01	0.1065	0.17	0.57	T	0.0	B	0.0	B	0.000	N	0.000	P	-1.845	N	1.61	T	-1.030	T	0.000	T	0.037	1.705	11.66	5.31	2.232	2.239	9.392	1.704882	1.704882	0.75	0.08814	0.021108	ID=COSM148806;OCCURENCE=1(stomach)	0.08	NA	11.0263934
550	19	17316782	17316782	T	C	exonic	MYO9B	NA	nonsynonymous SNV	MYO9B:NM_001130065:exon32:c.T5078C:p.V1693A,MYO9B:NM_004145:exon32:c.T5078C:p.V1693A	exonic	ENSG00000099331	NA	nonsynonymous SNV	ENSG00000099331:ENST00000397274:exon31:c.T5078C:p.V1693A,ENSG00000099331:ENST00000595641:exon31:c.T5078C:p.V1693A,ENSG00000099331:ENST00000594824:exon32:c.T5078C:p.V1693A,ENSG00000099331:ENST00000595618:exon32:c.T5078C:p.V1693A	NA	NA	19p13.11	NA	Name=Pol2-4H8	NA	NA	rs7248508	0.6	0.6	0.579	0.631589	0.3917	0.746	0.6772	0.708	0.6247	0.4	0.78	0.64	0.67	0.5198	0.78	0.93	T	0.0	B	0.0	B	0.011	N	1.000	P	-1.5	N	-1.85	D	-0.953	T	0.000	T	0.051	-0.277	2.673	4.74	1.136	1.204	10.878	-0.277158	NA	0.75	0.399857	0.645631	ID=COSM438877,COSM438878;OCCURENCE=1(breast)	0.587	NA	11.0219764
550	18	2724930	2724930	A	T	exonic	SMCHD1	NA	nonsynonymous SNV	SMCHD1:NM_015295:exon21:c.A2637T:p.K879N	exonic	ENSG00000101596	NA	nonsynonymous SNV	ENSG00000101596:ENST00000577880:exon10:c.A1050T:p.K350N,ENSG00000101596:ENST00000261598:exon21:c.A2637T:p.K879N,ENSG00000101596:ENST00000320876:exon21:c.A2637T:p.K879N	Score=597;Name=lod=356	NA	18p11.32	NA	NA	Name=2	NA	rs633422	0.28	0.28	0.231	0.20627	0.4553	0.1915	0.2925	0.0166	0.1605	0.44	0.24	0.33	0.02	0.418	0.44	0.28	T	0.0	B	0.0	B	0.001	D	0.284	P	0.805	L	1.8	T	-0.904	T	0.000	T	0.078	1.977	12.57	3.1	0.363	1.045	5.757	1.976754	1.976754	NA	0.438346	0.082642	NA	0.174	NA	11.0216874
550	8	196274	196274	T	G	exonic	ZNF596	NA	nonsynonymous SNV	ZNF596:NM_001042415:exon6:c.T1427G:p.V476G,ZNF596:NM_001042416:exon6:c.T1427G:p.V476G,ZNF596:NM_173539:exon6:c.T1427G:p.V476G	exonic	ENSG00000172748	NA	nonsynonymous SNV	ENSG00000172748:ENST00000320552:exon4:c.T1217G:p.V406G,ENSG00000172748:ENST00000308811:exon6:c.T1427G:p.V476G,ENSG00000172748:ENST00000398612:exon6:c.T1427G:p.V476G	NA	NA	8p23.3	NA	Name=KAP1,SETDB1,ZNF274	NA	NA	rs2072174	0.18	0.18	0.159	0.169329	0.0855	0.3294	0.1844	0.0862	0.1922	0.09	0.37	0.19	0.1	0.1381	0.37	0.05	D	0.069	B	0.054	B	.	.	1.000	P	0.745	N	2.19	T	-0.904	T	0.000	T	0.109	-0.658	1.112	-4.35	-0.910	-1.577	0.692	-0.6578	NA	0.05	0.089302	0.096232	NA	0.174	NA	11.0204314
550	20	34502107	34502107	G	A	exonic	PHF20	NA	nonsynonymous SNV	PHF20:NM_016436:exon12:c.G1813A:p.V605M	exonic	ENSG00000025293	NA	nonsynonymous SNV	ENSG00000025293:ENST00000374012:exon12:c.G1813A:p.V605M	Score=446;Name=lod=87	NA	20q11.23	Score=873;Name=V$IRF2_01	NA	NA	NA	rs17431878	0.09	0.09	0.074	0.105831	0.1034	0.0863	0.1153	0.0726	0.1667	0.1	0.07	0.13	0.06	0.1047	0.13	0.1	T	0.148	B	0.033	B	0.199	N	0.000	P	0	N	1.47	T	-1.051	T	0.001	T	0.024	0.947	8.86	3.18	0.694	1.275	8.456	0.946747	NA	0.09	0.105	0.074671	NA	0.08	NA	11.0202334
550	5	79026360	79026360	G	A	exonic	CMYA5	NA	nonsynonymous SNV	CMYA5:NM_153610:exon2:c.G1772A:p.G591D	exonic	ENSG00000164309	NA	nonsynonymous SNV	ENSG00000164309:ENST00000446378:exon2:c.G1772A:p.G591D	Score=272;Name=lod=17	NA	5q14.1	NA	NA	NA	NA	rs16877124	0.28	0.28	0.34	0.272364	0.0815	0.3621	0.0821	0.5787	0.0971	0.08	0.41	0.08	0.61	0.1466	0.61	1	T	0.0	B	0.0	B	0.020	N	0.999	P	-1.1	N	2.07	T	-0.942	T	0.000	T	0.131	-0.072	3.649	5.8	1.039	1.390	8.459	-0.071966	NA	1	0.085707	0.487703	ID=COSM149863;OCCURENCE=1(stomach)	0.304	NA	11.0195264
550	10	5136651	5136651	C	G	exonic	AKR1C3	NA	nonsynonymous SNV	AKR1C3:NM_001253909:exon1:c.C15G:p.H5Q,AKR1C3:NM_003739:exon1:c.C15G:p.H5Q	exonic	ENSG00000196139	NA	nonsynonymous SNV	ENSG00000196139:ENST00000380554:exon1:c.C15G:p.H5Q	NA	NA	10p15.1	NA	Name=HEY1,TBP,c-Fos,KAP1,Sin3Ak-20,GTF2F1_(RAP-74),p300,GATA-1,TAF1,SP1,Pol2	Name=91	NA	rs12529	0.57	0.57	0.558	0.579673	0.4046	0.8611	0.5447	0.4569	0.6605	0.41	0.87	0.55	0.5	0.4978	0.87	0.35	T	0.001	B	0.003	B	0.000	N	1.000	P	-0.55	N	0.85	T	-0.993	T	0.000	T	0.028	0.461	6.504	-4.36	-1.160	-1.565	6.266	0.461158	NA	0.34	0.412421	0.464367	NA	0.5	NA	11.0185124
550	7	27827103	27827103	T	A	exonic	TAX1BP1	NA	nonsynonymous SNV	TAX1BP1:NM_001206902:exon7:c.T448A:p.L150I,TAX1BP1:NM_001079864:exon8:c.T919A:p.L307I,TAX1BP1:NM_001206901:exon8:c.T919A:p.L307I,TAX1BP1:NM_006024:exon8:c.T919A:p.L307I	exonic	ENSG00000106052	NA	nonsynonymous SNV	ENSG00000106052:ENST00000433216:exon7:c.T448A:p.L150I,ENSG00000106052:ENST00000265393:exon8:c.T919A:p.L307I,ENSG00000106052:ENST00000396319:exon8:c.T919A:p.L307I,ENSG00000106052:ENST00000409980:exon8:c.T919A:p.L307I,ENSG00000106052:ENST00000543117:exon8:c.T919A:p.L307I	Score=663;Name=lod=657	NA	7p15.2	NA	NA	NA	NA	rs11540483	0.05	0.05	0.045	0.0379393	0.1173	0.001	0.0663	0.0061	0.0174	0.11	NA	0.08	0.01	0.0805	0.12	0.25	T	0.717	P	0.566	P	0.019	N	0.035	P	1.5	L	2.83	T	-1.088	T	0.001	T	0.071	2.844	15.47	2.28	0.460	2.318	2.990	2.843571	2.843571	0.03	0.117558	0.024058	NA	0.087	NA	11.0179754
550	1	248059476	248059476	A	C	exonic	OR2W3	NA	nonsynonymous SNV	OR2W3:NM_001001957:exon1:c.A588C:p.E196D	exonic	ENSG00000238243	NA	nonsynonymous SNV	ENSG00000238243:ENST00000360358:exon1:c.A588C:p.E196D,ENSG00000238243:ENST00000537741:exon3:c.A588C:p.E196D	NA	NA	1q44	NA	NA	NA	NA	rs12139390	0.59	0.59	0.559	0.576078	0.7962	0.5833	0.5965	0.2602	0.7546	0.79	0.54	0.61	0.29	0.7155	0.81	0.05	D	0.999	D	0.986	D	0.000	D	1.000	P	2.515	M	8.44	T	-0.914	T	0.000	T	0.208	2.059	12.84	-2.08	-0.240	-0.407	11.115	2.058771	2.058771	0.01	0.805465	0.363822	NA	0.572	NA	11.0161684
550	5	79024779	79024779	A	G	exonic	CMYA5	NA	nonsynonymous SNV	CMYA5:NM_153610:exon2:c.A191G:p.Y64C	exonic	ENSG00000164309	NA	nonsynonymous SNV	ENSG00000164309:ENST00000446378:exon2:c.A191G:p.Y64C	Score=651;Name=lod=591	NA	5q14.1	NA	NA	NA	NA	rs16877109	0.29	0.29	0.338	0.277356	0.0815	0.3621	0.085	0.5961	0.0971	0.08	0.41	0.09	0.62	0.1495	0.62	1	T	0.0	B	0.0	B	0.000	N	0.992	P	-1.1	N	2.01	T	-0.960	T	0.000	T	0.164	-0.333	2.421	5.7	1.415	5.366	10.364	-0.333065	NA	1	0.086564	0.515684	NA	0.319	NA	11.0157694
551	1	55182300	55182300	T	A	exonic	TTC4	NA	nonsynonymous SNV	TTC4:NM_004623:exon2:c.T139A:p.S47T	exonic	ENSG00000243725,ENSG00000271723	NA	stopgain	ENSG00000271723:ENST00000414150:exon25:c.T3846A:p.C1282X	Score=425;Name=lod=71	NA	1p32.3	Score=883;Name=V$FREAC7_01	NA	NA	NA	rs1147990	0.66	0.66	0.662	0.668331	0.5477	0.9683	0.6081	0.5038	0.7485	0.53	0.97	0.59	0.56	0.599	0.97	1	T	0.001	B	0.0	B	.	.	0.000	P	-0.425	N	2.67	T	-0.965	T	0.000	T	0.012	1.503	10.97	4.92	1.011	5.925	9.617	1.502706	1.502706	NA	0.511047	0.551975	NA	0.543	NA	11.0089197
551	14	68257352	68257352	T	A	exonic	ZFYVE26	NA	nonsynonymous SNV	ZFYVE26:NM_015346:exon15:c.A2692T:p.T898S	exonic	ENSG00000072121	NA	nonsynonymous SNV	ENSG00000072121:ENST00000347230:exon15:c.A2692T:p.T898S,ENSG00000072121:ENST00000555452:exon15:c.A2692T:p.T898S	Score=525;Name=lod=181	NA	14q24.1	NA	NA	NA	NA	rs17192170	0.05	0.05	0.039	0.0429313	0.1153	NA	0.0648	0.0061	0.047	0.1	NA	0.07	0.002	0.0903	0.12	0.89	T	0.08	B	0.027	B	0.113	N	0.000	P	2.015	M	1.73	T	-1.034	T	0.001	T	0.136	1.968	12.54	2.38	0.504	1.256	2.477	1.96792	1.96792	0.66	0.12	0.02769	NA	0.08	NA	11.0077334
551	2	43519977	43519977	C	T	exonic	THADA	NA	nonsynonymous SNV	THADA:NM_001083953:exon32:c.G4814A:p.C1605Y,THADA:NM_022065:exon32:c.G4814A:p.C1605Y	exonic	ENSG00000115970	NA	nonsynonymous SNV	ENSG00000115970:ENST00000405006:exon32:c.G4814A:p.C1605Y,ENSG00000115970:ENST00000405975:exon32:c.G4814A:p.C1605Y,ENSG00000115970:ENST00000415080:exon32:c.G3857A:p.C1286Y	Score=383;Name=lod=48	NA	2p21	NA	NA	NA	NA	rs35720761	0.08	0.08	0.071	0.0690895	0.1044	NA	0.1412	0.0772	0.0419	0.11	NA	0.14	0.07	0.098	0.14	0.08	T	0.322	B	0.061	B	0.011	N	0.000	P	0.625	N	2.91	T	-1.013	T	0.000	T	0.307	1.524	11.05	3.91	1.450	1.916	9.066	1.524467	1.524467	0	0.124246	0.077472	NA	0.123	NA	11.0066874
552	1	243329049	243329049	G	A	exonic	CEP170	NA	nonsynonymous SNV	CEP170:NM_001042404:exon12:c.C1919T:p.T640I,CEP170:NM_001042405:exon12:c.C1919T:p.T640I,CEP170:NM_014812:exon13:c.C2213T:p.T738I	exonic	ENSG00000143702	NA	nonsynonymous SNV	ENSG00000143702:ENST00000366543:exon12:c.C1919T:p.T640I,ENSG00000143702:ENST00000366544:exon12:c.C1919T:p.T640I,ENSG00000143702:ENST00000366542:exon13:c.C2213T:p.T738I	NA	NA	1q43	Score=918;Name=V$HSF2_01	NA	NA	NA	rs3766664	NA	NA	0.181	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3293	NA	0.13	T	0.441	B	0.2	B	0.876	N	0.973	N	0.55	N	0.87	T	-1.003	T	0.089	T	0.134	1.106	9.512	3.25	1.208	1.630	7.105	1.106068	NA	0.05	NA	NA	NA	NA	NA	11.0040334
552	1	183515428	183515428	G	A	exonic	SMG7	NA	nonsynonymous SNV	SMG7:NM_001174061:exon16:c.G2572A:p.V858I,SMG7:NM_173156:exon17:c.G2698A:p.V900I,SMG7:NM_201568:exon17:c.G2560A:p.V854I,SMG7:NM_201569:exon17:c.G2560A:p.V854I	exonic	ENSG00000116698	NA	nonsynonymous SNV	ENSG00000116698:ENST00000508461:exon16:c.G2572A:p.V858I,ENSG00000116698:ENST00000347615:exon17:c.G2698A:p.V900I,ENSG00000116698:ENST00000456731:exon17:c.G2434A:p.V812I,ENSG00000116698:ENST00000507469:exon17:c.G2560A:p.V854I,ENSG00000116698:ENST00000515829:exon17:c.G2560A:p.V854I,ENSG00000116698:ENST00000367537:exon18:c.G2647A:p.V883I	Score=572;Name=lod=282	NA	1q25.3	NA	NA	NA	NA	rs2298083	0.17	0.17	0.159	0.165535	0.0984	0.1052	0.2233	0.2935	0.0828	0.11	0.11	0.18	0.31	0.1231	0.31	0.18	T	0.255	B	0.106	B	0.921	N	0.000	P	0.695	N	0.82	T	-0.996	T	0.000	T	0.159	3.758	19.08	5.72	2.691	5.505	19.897	3.758164	3.758164	0.01	0.109535	0.256015	NA	0.196	NA	11.0022984
552	7	881668	881668	C	T	exonic	SUN1	NA	nonsynonymous SNV	SUN1:NM_001130965:exon3:c.C352T:p.H118Y,SUN1:NM_025154:exon3:c.C202T:p.H68Y,SUN1:NM_001171944:exon4:c.C352T:p.H118Y,SUN1:NM_001171946:exon4:c.C352T:p.H118Y,SUN1:NM_001171945:exon5:c.C415T:p.H139Y	exonic	ENSG00000164828	NA	nonsynonymous SNV	ENSG00000164828:ENST00000450881:exon2:c.C277T:p.H93Y,ENSG00000164828:ENST00000389574:exon3:c.C202T:p.H68Y,ENSG00000164828:ENST00000401592:exon3:c.C352T:p.H118Y,ENSG00000164828:ENST00000403868:exon3:c.C352T:p.H118Y,ENSG00000164828:ENST00000405266:exon3:c.C352T:p.H118Y,ENSG00000164828:ENST00000425407:exon3:c.C202T:p.H68Y,ENSG00000164828:ENST00000452783:exon4:c.C352T:p.H118Y,ENSG00000164828:ENST00000435699:exon5:c.C352T:p.H118Y,ENSG00000164828:ENST00000439679:exon5:c.C352T:p.H118Y,ENSG00000164828:ENST00000457378:exon5:c.C415T:p.H139Y,ENSG00000164828:ENST00000457598:exon5:c.C352T:p.H118Y,ENSG00000164828:ENST00000456758:exon6:c.C526T:p.H176Y	Score=321;Name=lod=27	NA	7p22.3	NA	NA	NA	NA	rs6461378	0.53	0.53	0.532	0.532947	0.4324	0.6399	0.4438	0.6233	0.4673	0.43	0.63	0.42	0.64	0.4667	0.64	0.38	T	0.945	P	0.558	P	0.276	N	0.000	P	1.1	L	0.7	T	-0.947	T	0.000	T	0.148	1.41	10.65	5.56	2.610	5.379	19.110	1.410311	1.410311	0.3	0.432012	0.563401	NA	0.514	NA	11.0022214
552	5	140793007	140793007	A	G	exonic	PCDHGA10	NA	nonsynonymous SNV	PCDHGA10:NM_018913:exon1:c.A265G:p.I89V,PCDHGA10:NM_032090:exon1:c.A265G:p.I89V	exonic	ENSG00000253846	NA	nonsynonymous SNV	ENSG00000253846:ENST00000398610:exon1:c.A265G:p.I89V	Score=397;Name=lod=55	NA	5q31.3	Score=766;Name=V$MIF1_01	NA	Name=4	NA	rs4912751	0.54	0.54	0.497	0.55611	0.4245	0.3254	0.6239	0.8941	0.4243	0.45	0.33	0.6	0.86	0.4782	0.86	1	T	0.0	B	0.002	B	.	.	0.000	P	-1.095	N	1.78	T	-0.972	T	0.000	T	0.012	-1.002	0.258	2.76	0.352	-2.080	10.693	-1.001608	NA	1	0.428622	0.833022	NA	0.543	NA	11.0020114
552	11	56143592	56143592	C	T	exonic	OR8U1,OR8U8	NA	nonsynonymous SNV	OR8U1:NM_001005204:exon1:c.C493T:p.R165C	exonic	ENSG00000172199	NA	nonsynonymous SNV	ENSG00000172199:ENST00000302270:exon1:c.C493T:p.R165C	NA	NA	11q12.1	NA	NA	NA	NA	rs17150411	0.32	0.32	0.281	NA	NA	NA	NA	NA	NA	0.29	0.43	0.42	0.16	0.3315	0.43	0.03	D	0.03	B	0.022	B	0.024	N	1.000	P	1.28	L	8.59	T	-1.050	T	0.000	T	0.555	0.108	4.583	2.79	1.472	-2.520	7.772	0.108223	NA	0.07	NA	NA	ID=COSM1354638;OCCURENCE=1(large_intestine)	0.239	NA	11.0018334
552	22	46719100	46719100	C	G	exonic	GTSE1	NA	nonsynonymous SNV	GTSE1:NM_016426:exon8:c.C1446G:p.D482E	exonic	ENSG00000075218	NA	nonsynonymous SNV	ENSG00000075218:ENST00000454366:exon8:c.C1446G:p.D482E	NA	NA	22q13.31	NA	Name=BRCA1_(C-1863),E2F1,c-Jun,HA-E2F1,p300_(N-15),TBP	Name=6	NA	rs6008684	0.12	0.12	0.128	0.114417	0.1223	0.001	0.0692	0.2791	0.0327	0.13	NA	0.09	0.27	0.0987	0.27	0.09	T	0.13	B	0.042	B	0.254	N	1.000	P	2.045	M	3.34	T	-0.943	T	0.000	T	0.051	0.183	4.984	-4.36	-0.816	-0.322	3.185	0.182775	NA	0.24	0.110814	0.258284	NA	0.138	NA	11.0015194
552	4	184190233	184190233	G	T	exonic	WWC2	NA	nonsynonymous SNV	WWC2:NM_024949:exon15:c.G2317T:p.A773S	exonic	ENSG00000151718	NA	nonsynonymous SNV	ENSG00000151718:ENST00000504005:exon8:c.G1363T:p.A455S,ENSG00000151718:ENST00000438543:exon14:c.G2023T:p.A675S,ENSG00000151718:ENST00000378925:exon15:c.G2023T:p.A675S,ENSG00000151718:ENST00000403733:exon15:c.G2317T:p.A773S,ENSG00000151718:ENST00000448232:exon15:c.G2317T:p.A773S,ENSG00000151718:ENST00000513834:exon15:c.G2170T:p.A724S	Score=446;Name=lod=87	NA	4q35.1	NA	NA	NA	NA	rs11941467	0.07	0.07	0.065	0.0998403	0.1143	0.0933	0.072	0.0166	0.2239	0.11	0.08	0.08	0.01	0.1076	0.13	0.57	T	0.099	B	0.04	B	0.005	N	1.000	N	0.22	N	2.46	T	-1.053	T	0.001	T	0.16	0.524	6.837	3.5	1.430	1.546	13.716	0.523552	NA	0.78	0.110116	0.037222	NA	0.087	NA	11.0013174
552	7	107834613	107834613	G	C	exonic	NRCAM	NA	nonsynonymous SNV	NRCAM:NM_001037132:exon14:c.C1633G:p.P545A,NRCAM:NM_001193583:exon16:c.C1576G:p.P526A,NRCAM:NM_001193584:exon16:c.C1576G:p.P526A,NRCAM:NM_005010:exon16:c.C1615G:p.P539A,NRCAM:NM_001193582:exon17:c.C1633G:p.P545A	exonic	ENSG00000091129	NA	nonsynonymous SNV	ENSG00000091129:ENST00000425651:exon14:c.C1633G:p.P545A,ENSG00000091129:ENST00000351718:exon16:c.C1615G:p.P539A,ENSG00000091129:ENST00000379024:exon16:c.C1576G:p.P526A,ENSG00000091129:ENST00000379028:exon17:c.C1633G:p.P545A,ENSG00000091129:ENST00000413765:exon17:c.C1576G:p.P526A,ENSG00000091129:ENST00000379022:exon18:c.C1633G:p.P545A	Score=426;Name=lod=72	NA	7q31.1	NA	Name=MafK_(ab50322),ERalpha_a,GR,MafK_(SC-477),MafF_(M8194)	Name=8	NA	rs6958498	0.73	0.73	0.703	0.698882	0.7992	0.8839	0.8012	0.441	0.681	0.8	0.89	0.8	0.4	0.7562	0.89	0.45	T	0.282	B	0.305	B	0.000	N	0.000	P	1.19	L	1.48	T	-1.097	T	0.000	T	0.246	2.438	14.11	4.82	1.381	7.583	16.795	2.438335	2.438335	0.23	0.779767	0.506582	NA	0.609	NA	10.9981664
552	16	81279120	81279120	T	C	exonic	BCMO1	NA	synonymous SNV	BCMO1:NM_017429:exon2:c.T105C:p.N35N	exonic	ENSG00000135697	NA	nonsynonymous SNV	ENSG00000135697:ENST00000425577:exon2:c.T28C:p.W10R	NA	NA	16q23.2	NA	NA	NA	NA	rs28370522	0.38	0.38	0.356	0.379593	0.341	0.3472	0.366	0.5484	0.2342	0.33	0.31	0.38	0.55	0.3405	0.55	0	D	0.0	B	0.0	B	.	.	0.000	P	.	.	-3.19	D	-1.038	T	0.000	T	.	0.577	7.118	-7.85	-2.283	-2.127	17.496	0.577439	NA	0	0.320698	0.517938	ID=COSM148124;OCCURENCE=1(stomach)	0.377	NA	10.997802
552	5	118969960	118969960	C	T	exonic	FAM170A	NA	nonsynonymous SNV	FAM170A:NM_001163991:exon2:c.C376T:p.P126S,FAM170A:NM_182761:exon3:c.C517T:p.P173S	exonic	ENSG00000164334	NA	nonsynonymous SNV	ENSG00000164334:ENST00000379555:exon2:c.C376T:p.P126S,ENSG00000164334:ENST00000504819:exon2:c.C376T:p.P126S,ENSG00000164334:ENST00000335286:exon3:c.C517T:p.P173S,ENSG00000164334:ENST00000515256:exon3:c.C517T:p.P173S	NA	NA	5q23.1	NA	NA	NA	NA	rs328694	0.43	0.43	0.416	0.44349	0.4453	0.495	0.3876	0.3495	0.5552	0.42	0.52	0.4	0.35	0.4473	0.52	.	.	1.0	D	0.999	D	0.000	D	1.000	P	2.075	M	0.98	T	-0.914	T	0.000	T	0.022	1.318	10.32	2.11	0.357	0.813	3.731	1.318429	1.318429	0.13	0.444856	0.340715	ID=COSM1130958;OCCURENCE=1(prostate)	0.464	NA	10.9958774
553	11	123887164	123887164	A	C	exonic	OR10G4	NA	nonsynonymous SNV	OR10G4:NM_001004462:exon1:c.A883C:p.K295Q	exonic	ENSG00000254737	NA	nonsynonymous SNV	ENSG00000254737:ENST00000320891:exon1:c.A883C:p.K295Q	Score=435;Name=lod=78	NA	11q24.1	NA	NA	NA	NA	rs4936881	0.45	0.45	0.377	0.427716	0.4404	0.3591	0.5029	0.469	0.3763	0.44	0.4	0.53	0.45	0.4472	0.53	0.01	D	0.265	B	0.128	B	0.014	N	0.989	P	1.34	L	1.08	T	-0.905	T	0.000	T	0.085	2.121	13.05	3.38	1.547	3.532	11.941	2.121331	2.121331	0	0.455793	0.478646	ID=COSM147352;OCCURENCE=1(stomach)	0.377	NA	10.9899404
553	16	23080634	23080634	C	A	exonic	USP31	NA	nonsynonymous SNV	USP31:NM_020718:exon16:c.G2792T:p.R931L	exonic	ENSG00000103404	NA	nonsynonymous SNV	ENSG00000103404:ENST00000567975:exon2:c.G671T:p.R224L,ENSG00000103404:ENST00000219689:exon16:c.G2792T:p.R931L	NA	NA	16p12.2	NA	NA	NA	NA	rs10083789	0.18	0.18	0.185	0.145567	0.3042	0.0546	0.1873	0.1157	0.0869	0.3	0.06	0.22	0.12	0.2319	0.31	0.39	T	0.982	D	0.691	P	0.102	N	1.000	P	1.59	L	2.95	T	-0.829	T	0.000	T	0.425	2.805	15.34	5.07	1.557	1.836	14.489	2.805061	2.805061	0.01	0.308837	0.153391	NA	0.145	NA	10.9883964
553	1	159409857	159409857	A	G	exonic	OR10J1	NA	nonsynonymous SNV	OR10J1:NM_012351:exon1:c.A309G:p.I103M	exonic	ENSG00000196184	NA	nonsynonymous SNV	ENSG00000196184:ENST00000423932:exon1:c.A309G:p.I103M	NA	NA	1q23.2	NA	NA	NA	NA	rs12048482	0.47	0.47	0.46	0.479633	0.6471	0.2381	0.5101	0.4297	0.6022	0.65	0.27	0.56	0.39	0.563	0.65	0.02	D	0.971	D	0.841	P	0.001	D	1.000	P	2.8	M	7.13	T	-0.903	T	0.001	T	0.284	1.13	9.605	-1.89	-0.511	-1.590	3.694	1.129702	NA	0	0.636512	0.493872	ID=COSM146659,COSM146660;OCCURENCE=1(stomach)	0.514	NA	10.9867214
554	1	152281228	152281228	C	G	exonic	FLG	NA	nonsynonymous SNV	FLG:NM_002016:exon3:c.G6134C:p.S2045T	exonic	ENSG00000143631	NA	nonsynonymous SNV	ENSG00000143631:ENST00000368799:exon3:c.G6134C:p.S2045T	NA	NA	1q21.3	NA	NA	NA	NA	rs7546186	NA	NA	0.188	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2189	0.33	0.54	T	0.899	P	0.722	P	.	.	1.000	N	2.045	M	3.14	T	-1.007	T	0.016	T	0.018	0.147	4.788	2.37	0.726	1.514	8.020	0.146596	NA	0.15	0.131138	0.327962	NA	NA	NA	10.9832954
554	11	69063510	69063510	G	A	exonic	MYEOV	NA	nonsynonymous SNV	MYEOV:NM_138768:exon3:c.G593A:p.R198Q	exonic	ENSG00000172927	NA	nonsynonymous SNV	ENSG00000172927:ENST00000535407:exon2:c.G419A:p.R140Q,ENSG00000172927:ENST00000308946:exon3:c.G593A:p.R198Q,ENSG00000172927:ENST00000441339:exon3:c.G593A:p.R198Q	NA	NA	11q13.3	NA	Name=Egr-1	NA	NA	rs11539762	0.13	0.13	0.138	0.160942	0.1083	0.2163	0.0893	0.1074	0.2812	0.1	0.2	0.1	0.11	0.1342	0.2	0	D	0.981	D	0.152	B	.	.	1.000	P	0	N	1.84	T	-0.985	T	0.000	T	0.067	1.565	11.19	1.41	1.070	-0.346	6.216	1.564823	1.564823	0.69	0.107708	0.098409	ID=COSM1356602;OCCURENCE=1(large_intestine)	0.174	NA	10.9831254
554	11	5536852	5536852	A	G	exonic	UBQLNL	NA	nonsynonymous SNV	UBQLNL:NM_145053:exon1:c.T820C:p.Y274H	exonic	ENSG00000175518	NA	nonsynonymous SNV	ENSG00000175518:ENST00000380184:exon1:c.T820C:p.Y274H	NA	NA	11p15.4	NA	NA	NA	NA	rs2017434	0.34	0.34	0.31	0.320887	0.2644	0.375	0.3487	0.3472	0.2679	0.28	0.41	0.31	0.37	0.3125	0.41	0.01	D	0.799	P	0.425	B	0.145	N	1.000	P	2.75	M	0.23	T	-1.008	T	0.000	T	0.139	0.651	7.494	3.94	0.925	1.024	8.845	0.651206	NA	0.04	0.275308	0.336211	NA	0.304	NA	10.9811254
554	2	160885442	160885442	T	C	exonic	PLA2R1	NA	nonsynonymous SNV	PLA2R1:NM_001007267:exon5:c.A874G:p.M292V,PLA2R1:NM_001195641:exon5:c.A874G:p.M292V,PLA2R1:NM_007366:exon5:c.A874G:p.M292V	exonic	ENSG00000153246	NA	nonsynonymous SNV	ENSG00000153246:ENST00000283243:exon5:c.A874G:p.M292V,ENSG00000153246:ENST00000392771:exon5:c.A874G:p.M292V	Score=329;Name=lod=29	NA	2q24.2	NA	NA	NA	NA	rs3749117	0.33	0.33	0.3	0.256989	0.4742	0.3542	0.2695	0.0552	0.1973	0.49	0.35	0.3	0.06	0.3886	0.49	0.04	D	0.002	B	0.011	B	0.587	N	0.995	P	1.125	L	2.44	T	-0.936	T	0.000	T	0.093	0.936	8.814	4.64	0.991	3.267	12.167	0.935883	NA	0.3	0.489767	0.121198	NA	0.254	NA	10.9807664
554	2	207820276	207820276	G	A	exonic	CPO	NA	nonsynonymous SNV	CPO:NM_173077:exon3:c.G255A:p.M85I	exonic	ENSG00000144410	NA	nonsynonymous SNV	ENSG00000144410:ENST00000272852:exon3:c.G255A:p.M85I	Score=317;Name=lod=26	NA	2q33.3	NA	NA	NA	NA	rs13420911	0.39	0.39	0.388	0.382388	0.4553	0.4067	0.2579	0.3843	0.3681	0.45	0.39	0.3	0.39	0.4222	0.48	0.7	T	0.021	B	0.014	B	0.000	D	0.965	P	-1.19	N	3.12	T	-0.961	T	0.000	T	0.171	-0.474	1.814	5.11	2.660	1.092	11.019	-0.473902	NA	0.99	0.475581	0.38788	NA	0.486	NA	10.9802524
554	19	48800914	48800914	G	A	exonic	CCDC114	NA	nonsynonymous SNV	CCDC114:NM_144577:exon13:c.C1403T:p.P468L	exonic	ENSG00000105479	NA	nonsynonymous SNV	ENSG00000105479:ENST00000315396:exon13:c.C1403T:p.P468L	Score=300;Name=lod=22	NA	19q13.33	NA	NA	NA	NA	rs35461177	0.2	0.2	0.169	0.167532	0.2803	0.1329	0.2277	0.1036	0.1309	0.26	0.14	0.28	0.1	0.2887	0.29	0.02	D	0.606	P	0.077	B	.	.	0.721	P	0.895	L	1.98	T	-0.927	T	0.000	T	0.032	2.823	15.4	1.84	0.965	1.490	5.469	2.822657	2.822657	0.07	0.285465	0.128688	ID=COSM148680;OCCURENCE=1(stomach)	0.217	NA	10.9788684
554	2	121726366	121726366	C	T	exonic	GLI2	NA	synonymous SNV	GLI2:NM_005270:exon5:c.C720T:p.D240D	exonic	ENSG00000074047	NA	nonsynonymous SNV	ENSG00000074047:ENST00000360874:exon3:c.C307T:p.R103C	Score=457;Name=lod=96	NA	2q14.2	NA	NA	NA	NA	rs142793481	0.01	0.01	0.001	0.00359425	0.0089	0.002	0.0014	NA	0.0061	0.01	0.0035	0.01	NA	0.0073	0.01	0	D	0.008	B	0.002	B	.	.	1.000	D	.	.	.	.	-0.994	T	0.122	T	.	4.124	21.3	-4.85	-0.744	-0.851	14.435	4.124312	4.124312	0	0.005465	0.001589	NA	NA	NA	10.978335
554	17	15554504	15554504	G	A	exonic	TRIM16	NA	synonymous SNV	TRIM16:NM_006470:exon4:c.C420T:p.A140A	exonic	ENSG00000221926,ENSG00000251537	NA	synonymous SNV	ENSG00000251537:ENST00000455584:exon1:c.C420T:p.A140A,ENSG00000221926:ENST00000336708:exon4:c.C420T:p.A140A,ENSG00000221926:ENST00000578237:exon6:c.C420T:p.A140A	Score=358;Name=lod=38	NA	17p12	NA	Name=CTCF,Pol2,SMC3_(ab9263)	Name=27	NA	rs4792642	0.25	0.25	0.226	0.276358	0.2107	0.3125	0.281	0.2829	0.2945	0.21	0.28	0.25	0.27	0.2511	0.3	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.077	T	0.000	T	.	1.305	10.27	4.44	2.563	0.296	13.537	1.304808	1.304808	NA	0.226628	0.299138	NA	0.152	NA	10.9782386
554	1	9074861	9074861	C	T	exonic	SLC2A7	NA	nonsynonymous SNV	SLC2A7:NM_207420:exon7:c.G782A:p.R261Q	exonic	ENSG00000197241	NA	nonsynonymous SNV	ENSG00000197241:ENST00000400906:exon7:c.G782A:p.R261Q	Score=358;Name=lod=38	NA	1p36.23	NA	NA	Name=6	NA	rs12402973	0.11	0.11	0.092	0.0950479	0.1123	0.1696	0.1527	0.0129	0.0706	0.1	0.16	0.14	0.01	0.1474	0.16	0.31	T	0.009	B	0.005	B	0.033	N	0.997	P	-0.045	N	-0.73	T	-1.087	T	0.001	T	0.067	-0.133	3.349	-2.98	-1.040	0.018	12.185	-0.132953	NA	0.23	0.097533	0.030923	ID=COSM1126929;OCCURENCE=1(prostate)	0.058	NA	10.9761004
554	3	193036783	193036783	G	A	exonic	ATP13A5	NA	nonsynonymous SNV	ATP13A5:NM_198505:exon17:c.C2030T:p.A677V	exonic	ENSG00000187527	NA	nonsynonymous SNV	ENSG00000187527:ENST00000342358:exon17:c.C2030T:p.A677V	Score=361;Name=lod=39	NA	3q29	NA	NA	NA	NA	rs73888252	0.19	0.19	0.183	0.205871	0.0974	0.2768	0.1326	0.2731	0.2055	0.1	0.29	0.13	0.24	0.1492	0.29	0.22	T	0.013	B	0.016	B	0.939	N	0.473	P	0.52	N	0.38	T	-1.048	T	0.000	T	0.056	0.661	7.543	5.0	1.454	1.902	12.263	0.661046	NA	0.27	0.111163	0.240581	NA	0.203	NA	10.9755704
554	8	144893084	144893084	G	A	exonic	SCRIB	NA	nonsynonymous SNV	SCRIB:NM_015356:exon11:c.C1265T:p.P422L,SCRIB:NM_182706:exon11:c.C1265T:p.P422L	exonic	ENSG00000180900	NA	nonsynonymous SNV	ENSG00000180900:ENST00000320476:exon11:c.C1265T:p.P422L,ENSG00000180900:ENST00000356994:exon11:c.C1265T:p.P422L,ENSG00000180900:ENST00000377533:exon11:c.C1022T:p.P341L	Score=407;Name=lod=60	NA	8q24.3	NA	NA	NA	NA	rs6558394	0.53	0.53	0.509	0.534145	0.6282	0.3502	0.6729	0.466	0.6207	0.64	0.36	0.64	0.5	0.5984	0.64	0.29	T	0.983	D	0.839	P	.	.	0.000	P	0.345	N	-1.07	T	-0.904	T	0.000	T	0.113	2.935	15.78	4.21	2.047	7.463	15.888	2.93456	2.93456	0.23	0.631518	0.484084	NA	0.551	NA	10.9752154
555	12	96312686	96312686	C	A	exonic	CCDC38	NA	nonsynonymous SNV	CCDC38:NM_182496:exon3:c.G106T:p.V36F	exonic	ENSG00000165972	NA	nonsynonymous SNV	ENSG00000165972:ENST00000344280:exon3:c.G106T:p.V36F	Score=458;Name=lod=97	NA	12q23.1	NA	NA	NA	NA	rs12368787	0.07	0.07	0.057	0.066893	0.1372	0.0278	0.0749	0.0401	0.0654	0.13	0.02	0.07	0.05	0.0977	0.13	0.62	T	0.0	B	0.0	B	0.004	N	0.000	P	-0.975	N	1.7	T	-1.016	T	0.000	T	0.098	-0.157	3.234	4.85	0.983	2.491	8.897	-0.156872	NA	0.75	0.124419	0.048365	NA	0.043	NA	10.9740144
555	1	89449390	89449390	T	C	exonic	RBMXL1	NA	nonsynonymous SNV	RBMXL1:NM_019610:exon2:c.A120G:p.I40M,RBMXL1:NM_001162536:exon3:c.A120G:p.I40M	exonic	ENSG00000213516	NA	nonsynonymous SNV	ENSG00000213516:ENST00000321792:exon2:c.A120G:p.I40M,ENSG00000213516:ENST00000399794:exon3:c.A120G:p.I40M	Score=671;Name=lod=711	NA	1p22.2	NA	NA	NA	NA	rs78952987	NA	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3607	0.033	1	T	0.0	B	0.01	B	0.000	N	1.000	N	0.305	N	-1.55	D	-1.001	T	0.090	T	0.15	-0.155	3.243	0.297	-0.006	3.335	4.201	-0.154977	NA	1	NA	NA	NA	0.029	CLINSIG=other;CLNDBN=Malignant_melanoma;CLNREVSTAT=not;CLNACC=RCV000064930.2;CLNDSDB=MedGen:SNOMED_CT;CLNDSDBID=C0025202:2092003	10.9726334
555	8	7218632	7218632	C	T	exonic	ZNF705G	NA	nonsynonymous SNV	ZNF705G:NM_001164457:exon2:c.G139A:p.G47R	exonic	ENSG00000215372	NA	nonsynonymous SNV	ENSG00000215372:ENST00000400078:exon2:c.G139A:p.G47R,ENSG00000215372:ENST00000400156:exon4:c.G139A:p.G47R	Score=251;Name=lod=14	NA	8p23.1	NA	NA	NA	NA	rs3989698	NA	NA	0.286	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3617	0.011	.	.	.	.	.	.	.	.	0.989	P	3.175	M	4.13	T	-1.072	T	0.032	T	0.154	0.086	4.466	1.24	1.034	2.931	8.534	0.086282	NA	0.05	NA	NA	NA	0.007	NA	10.9716334
555	12	31605044	31605044	G	T	exonic	DENND5B	NA	nonsynonymous SNV	DENND5B:NM_144973:exon5:c.C1459A:p.H487N	exonic	ENSG00000170456	NA	nonsynonymous SNV	ENSG00000170456:ENST00000546299:exon4:c.C1315A:p.H439N,ENSG00000170456:ENST00000389082:exon5:c.C1459A:p.H487N,ENSG00000170456:ENST00000306833:exon6:c.C1564A:p.H522N,ENSG00000170456:ENST00000354285:exon6:c.C1525A:p.H509N,ENSG00000170456:ENST00000536562:exon7:c.C1564A:p.H522N	Score=432;Name=lod=76	NA	12p11.21	NA	NA	NA	NA	rs1056320	0.18	0.18	0.178	0.177316	0.1233	0.247	0.1052	0.2284	0.1431	0.12	0.24	0.12	0.25	0.1386	0.25	0.46	T	0.006	B	0.026	B	0.022	N	0.998	P	0.345	N	1.05	T	-1.030	T	0.000	T	0.087	1.421	10.69	4.67	2.421	5.975	13.191	1.420867	1.420867	0.38	0.104837	0.199379	NA	0.181	NA	10.9665964
555	15	30018627	30018627	T	C	exonic	TJP1	NA	nonsynonymous SNV	TJP1:NM_003257:exon18:c.A2368G:p.I790V,TJP1:NM_175610:exon18:c.A2368G:p.I790V	exonic	ENSG00000104067	NA	nonsynonymous SNV	ENSG00000104067:ENST00000346128:exon18:c.A2368G:p.I790V,ENSG00000104067:ENST00000356107:exon18:c.A2368G:p.I790V,ENSG00000104067:ENST00000545208:exon18:c.A2368G:p.I790V,ENSG00000104067:ENST00000400011:exon19:c.A2380G:p.I794V	Score=611;Name=lod=406	NA	15q13.1	NA	NA	NA	NA	rs2229515	0.11	0.11	0.086	0.141773	0.1262	0.124	0.2003	0.0582	0.2474	0.11	0.11	0.18	0.07	0.1312	0.18	.	.	0.73	P	0.728	P	0.000	N	0.000	P	1.8	L	2.06	T	-1.081	T	0.000	T	0.093	3.304	17.1	3.52	0.475	2.833	8.452	3.303927	3.303927	0.04	0.110107	0.069962	NA	0.094	NA	10.9658264
556	12	31256546	31256546	G	A	exonic	DDX11	NA	nonsynonymous SNV	DDX11:NM_004399:exon25:c.G2422A:p.V808I,DDX11:NM_001257144:exon26:c.G2567A:p.R856H,DDX11:NM_001257145:exon26:c.G2494A:p.V832I,DDX11:NM_030653:exon26:c.G2572A:p.V858I,DDX11:NM_152438:exon26:c.G2567A:p.R856H	exonic	ENSG00000013573	NA	nonsynonymous SNV	ENSG00000013573:ENST00000350437:exon25:c.G2422A:p.V808I,ENSG00000013573:ENST00000228264:exon26:c.G2494A:p.V832I,ENSG00000013573:ENST00000407793:exon26:c.G2567A:p.R856H,ENSG00000013573:ENST00000542838:exon26:c.G2572A:p.V858I,ENSG00000013573:ENST00000545668:exon26:c.G2567A:p.R856H	Score=511;Name=lod=159	NA	12p11.21	NA	Name=ERalpha_a	NA	NA	rs1046457	0.53	0.53	0.523	0.634185	0.4384	0.8075	0.611	0.708	0.5736	0.34	0.74	0.53	0.6	0.5095	0.74	1	T	0.001	B	0.0	B	0.280	N	0.000	P	.	.	-2.76	D	-0.942	T	0.000	T	0.288	-1.428	0.021	3.14	0.313	2.796	6.492	-1.427665	NA	1	0.422406	0.646297	NA	0.058	NA	10.9630274
556	17	72350412	72350412	G	A	exonic	KIF19	NA	nonsynonymous SNV	KIF19:NM_153209:exon18:c.G2420A:p.R807H	exonic	ENSG00000196169	NA	nonsynonymous SNV	ENSG00000196169:ENST00000389916:exon18:c.G2420A:p.R807H	Score=439;Name=lod=81	NA	17q25.1	NA	Name=CTCF_(SC-5916),NANOG_(SC-33759),Pol2-4H8,ZNF263,JunD,TCF12,CCNT2,PAX5-C20,CTCF_(C-20),ATF3,SMC3_(ab9263),TAF7_(SQ-8),YY1_(C-20),Znf143_(16618-1-AP),CTCFL_(SC-98982),GABP,CTCF,Rad21	Name=48	NA	rs2271535	0.36	0.36	0.337	0.343051	0.4712	0.4008	0.4207	0.0756	0.4581	0.47	0.42	0.41	0.08	0.4392	0.47	0.19	T	0.008	B	0.002	B	.	.	0.985	P	1.7	L	-0.6	T	-0.967	T	0.000	T	0.1	2.037	12.77	1.78	1.141	1.286	6.784	2.036734	2.036734	0	0.467233	0.141127	ID=COSM437309;OCCURENCE=1(breast)	0.391	NA	10.9557004
557	18	55240505	55240505	C	T	exonic	FECH	NA	nonsynonymous SNV	FECH:NM_000140:exon3:c.G287A:p.R96Q,FECH:NM_001012515:exon3:c.G305A:p.R102Q	exonic	ENSG00000066926	NA	nonsynonymous SNV	ENSG00000066926:ENST00000262093:exon3:c.G287A:p.R96Q,ENSG00000066926:ENST00000382873:exon3:c.G305A:p.R102Q,ENSG00000066926:ENST00000585494:exon3:c.G287A:p.R96Q,ENSG00000066926:ENST00000585747:exon3:c.G287A:p.R96Q,ENSG00000066926:ENST00000592699:exon3:c.G287A:p.R96Q,ENSG00000066926:ENST00000591215:exon4:c.G71A:p.R24Q	Score=568;Name=lod=271	NA	18q21.31	NA	NA	NA	NA	rs1041951	0.06	0.06	0.062	0.0517173	0.1233	0.001	0.0793	0.0492	0.0143	0.13	NA	0.08	0.03	0.1029	0.15	0.2	T	0.117	B	0.005	B	0.000	N	0.028	P	1.805	L	-4.34	D	-0.565	T	0.026	T	0.08	2.558	14.52	4.38	1.630	0.503	10.347	2.558455	2.558455	0.33	0.152442	0.060826	NA	0.051	NA	10.9546914
557	7	48287840	48287840	G	A	exonic	ABCA13	NA	nonsynonymous SNV	ABCA13:NM_152701:exon14:c.G1664A:p.R555H	exonic	ENSG00000179869	NA	nonsynonymous SNV	ENSG00000179869:ENST00000435803:exon14:c.G1664A:p.R555H	NA	NA	7p12.3	NA	NA	NA	NA	rs2361519	0.19	0.19	0.2	0.198083	0.1123	0.1508	0.1873	0.3003	0.2045	0.11	0.18	0.18	0.32	0.1537	0.32	1	T	0.002	B	0.001	B	0.164	N	1.000	P	-0.145	N	-2.35	D	-0.916	T	0.000	T	0.052	-0.9	0.438	-8.57	-1.979	-1.368	15.131	-0.899834	NA	0.62	0.113069	0.270197	NA	0.188	NA	10.9542644
557	2	86433240	86433240	C	T	exonic	MRPL35	NA	nonsynonymous SNV	MRPL35:NM_016622:exon2:c.C55T:p.P19S,MRPL35:NM_145644:exon2:c.C55T:p.P19S	exonic	ENSG00000132313	NA	nonsynonymous SNV	ENSG00000132313:ENST00000254644:exon2:c.C55T:p.P19S,ENSG00000132313:ENST00000337109:exon2:c.C55T:p.P19S,ENSG00000132313:ENST00000409180:exon2:c.C55T:p.P19S,ENSG00000132313:ENST00000605125:exon2:c.C55T:p.P19S	Score=325;Name=lod=28	NA	2p11.2	NA	NA	NA	NA	rs10901	0.26	0.26	0.244	0.244609	0.4751	0.121	0.2781	0.0552	0.3671	0.46	0.12	0.33	0.06	0.4	0.51	0.33	T	0.192	B	0.033	B	0.000	N	0.038	P	2.295	M	2.65	T	-0.941	T	0.000	T	0.233	2.81	15.36	4.74	1.527	2.399	10.645	2.809597	2.809597	0.18	0.505	0.112801	ID=COSM148890;OCCURENCE=1(stomach),1(prostate)	0.319	NA	10.9532334
557	3	194061826	194061826	C	T	exonic	CPN2	NA	nonsynonymous SNV	CPN2:NM_001080513:exon2:c.G1606A:p.V536M	exonic	ENSG00000178772	NA	nonsynonymous SNV	ENSG00000178772:ENST00000323830:exon2:c.G1606A:p.V536M,ENSG00000178772:ENST00000429275:exon2:c.G1606A:p.V536M	Score=243;Name=lod=13	NA	3q29	NA	NA	NA	NA	rs11711157	0.3	0.3	0.294	0.284545	0.3121	0.3175	0.245	0.1702	0.4049	0.34	0.37	0.3	0.16	0.2944	0.37	0	D	0.918	P	0.063	B	0.083	N	0.775	P	0.895	L	0.38	T	-0.961	T	0.000	T	0.128	2.229	13.41	2.79	0.871	0.955	10.235	2.229251	2.229251	0	0.280116	0.186564	NA	0.232	NA	10.9467174
557	8	104337367	104337367	A	C	exonic	FZD6	NA	nonsynonymous SNV	FZD6:NM_001164615:exon4:c.A1033C:p.M345L,FZD6:NM_003506:exon4:c.A1033C:p.M345L,FZD6:NM_001164616:exon5:c.A937C:p.M313L	exonic	ENSG00000164930	NA	nonsynonymous SNV	ENSG00000164930:ENST00000540287:exon3:c.A118C:p.M40L,ENSG00000164930:ENST00000358755:exon4:c.A1033C:p.M345L,ENSG00000164930:ENST00000522484:exon4:c.A1033C:p.M345L,ENSG00000164930:ENST00000522566:exon4:c.A1033C:p.M345L,ENSG00000164930:ENST00000523739:exon5:c.A937C:p.M313L	Score=625;Name=lod=464	NA	8q22.3	NA	NA	NA	NA	rs3808553	0.46	0.46	0.444	0.448083	0.4583	0.6379	0.5086	0.2988	0.4008	0.45	0.6	0.49	0.28	0.4625	0.6	0.53	T	0.05	B	0.023	B	0.000	D	0.009	P	-0.02	N	-1.08	T	-0.969	T	0.000	T	0.267	1.221	9.953	6.17	2.371	3.769	16.822	1.220576	NA	0.25	0.466279	0.304358	NA	0.471	NA	10.9462544
557	3	8809222	8809222	C	T	exonic	OXTR	NA	nonsynonymous SNV	OXTR:NM_000916:exon3:c.G652A:p.A218T	exonic	ENSG00000180914	NA	nonsynonymous SNV	ENSG00000180914:ENST00000316793:exon3:c.G652A:p.A218T	Score=579;Name=lod=301	NA	3p25.3	NA	Name=GATA-2,GATA3_(SC-268)	Name=86	NA	rs4686302	0.15	0.15	0.111	0.142572	0.1183	0.1696	0.2695	0.0749	0.1411	0.13	0.17	0.24	0.09	0.149	0.24	0.33	T	0.002	B	0.01	B	0.020	N	0.000	P	0.18	N	1.22	T	-0.997	T	0.000	T	0.071	0.641	7.441	3.49	0.623	0.913	10.46	0.640665	NA	0.95	0.120144	0.071947	NA	0.094	NA	10.9458894
557	5	167933158	167933158	T	A	exonic	RARS	NA	nonsynonymous SNV	RARS:NM_002887:exon10:c.T1190A:p.F397Y	exonic	ENSG00000113643	NA	nonsynonymous SNV	ENSG00000113643:ENST00000538719:exon9:c.T572A:p.F191Y,ENSG00000113643:ENST00000231572:exon10:c.T1190A:p.F397Y	NA	NA	5q34	Score=759;Name=V$MEF2_04	NA	NA	NA	rs2305734	0.1	0.1	0.08	0.0439297	0.0785	0.0635	0.0418	0.0038	0.044	0.18	0.08	0.11	0.02	0.1372	0.18	0.04	D	0.001	B	0.024	B	0.021	N	1.000	P	1.3	L	-0.07	T	-1.087	T	0.000	T	0.077	-0.993	0.27	3.13	0.120	2.391	4.397	-0.993336	NA	1	0.172442	0.035633	NA	0.014	NA	10.9451914
558	5	178540975	178540975	G	A	exonic	ADAMTS2	NA	nonsynonymous SNV	ADAMTS2:NM_014244:exon22:c.C3529T:p.P1177S	exonic	ENSG00000087116	NA	nonsynonymous SNV	ENSG00000087116:ENST00000251582:exon22:c.C3529T:p.P1177S	Score=333;Name=lod=30	NA	5q35.3	NA	NA	NA	NA	rs1054480	0.25	0.25	0.242	0.263778	0.2952	0.3105	0.3833	0.0401	0.4008	0.3	0.31	0.34	0.05	0.2998	0.34	0.57	T	0.651	P	0.084	B	0.004	N	0.000	P	0.695	N	0.35	T	-0.969	T	0.000	T	0.061	1.386	10.57	5.05	2.308	3.893	17.394	1.386031	1.386031	0.2	0.293837	0.081026	NA	0.246	NA	10.9444964
558	19	6156510	6156510	A	G	exonic	ACSBG2	NA	nonsynonymous SNV	ACSBG2:NM_030924:exon5:c.A455G:p.K152R	exonic	ENSG00000130377	NA	nonsynonymous SNV	ENSG00000130377:ENST00000587227:exon1:c.A50G:p.K17R,ENSG00000130377:ENST00000252669:exon5:c.A455G:p.K152R,ENSG00000130377:ENST00000586696:exon5:c.A455G:p.K152R,ENSG00000130377:ENST00000588304:exon5:c.A305G:p.K102R,ENSG00000130377:ENST00000591403:exon5:c.A455G:p.K152R	Score=458;Name=lod=97	NA	19p13.3	NA	NA	NA	NA	rs33937754	0.06	0.06	0.053	0.0495208	0.1332	NA	0.0677	0.0068	0.0593	0.13	NA	0.07	0.0041	0.1025	0.15	0.93	T	0.004	B	0.029	B	0.019	N	0.000	P	0.87	L	2.84	T	-1.020	T	0.000	T	0.071	0.545	6.947	5.9	2.251	4.329	14.284	0.544588	NA	0.92	0.153372	0.026101	NA	0.087	NA	10.9442614
558	13	114175032	114175032	G	A	exonic	TMCO3	NA	nonsynonymous SNV	TMCO3:NM_017905:exon8:c.G1327A:p.A443T	exonic	ENSG00000150403	NA	nonsynonymous SNV	ENSG00000150403:ENST00000434316:exon8:c.G1327A:p.A443T	Score=361;Name=lod=39	NA	13q34	NA	NA	NA	NA	rs2260335	0.2	0.2	0.218	0.203674	0.1282	0.1498	0.1369	0.41	0.1053	0.12	0.16	0.14	0.4	0.1359	0.4	0.45	T	0.097	B	0.033	B	0.004	N	0.000	P	0.84	L	2.39	T	-0.899	T	0.000	T	0.015	-0.155	3.243	4.09	1.083	2.740	13.108	-0.154835	NA	0.34	0.125465	0.344303	NA	0.196	NA	10.9437684
558	5	74055209	74055209	T	C	exonic	GFM2	NA	nonsynonymous SNV	GFM2:NM_032380:exon4:c.A191G:p.N64S,GFM2:NM_170681:exon4:c.A191G:p.N64S,GFM2:NM_170691:exon4:c.A191G:p.N64S	exonic	ENSG00000164347	NA	nonsynonymous SNV	ENSG00000164347:ENST00000296805:exon4:c.A191G:p.N64S,ENSG00000164347:ENST00000345239:exon4:c.A191G:p.N64S,ENSG00000164347:ENST00000427854:exon4:c.A191G:p.N64S,ENSG00000164347:ENST00000509097:exon4:c.A191G:p.N64S,ENSG00000164347:ENST00000509430:exon5:c.A191G:p.N64S	Score=397;Name=lod=55	NA	5q13.3	NA	NA	NA	NA	rs957680	0.15	0.15	0.168	0.155751	0.1392	0.0208	0.1239	0.3427	0.0818	0.11	0.02	0.15	0.37	0.1285	0.37	0.41	T	0.072	B	0.032	B	0.000	N	0.516	P	0.13	N	0.26	T	-1.015	T	0.000	T	0.057	2.065	12.86	-4.89	-1.096	-1.041	13.336	2.06503	2.06503	0.1	0.124186	0.313209	NA	0.246	NA	10.9414474
558	19	2917287	2917287	C	A	exonic	ZNF57	NA	nonsynonymous SNV	ZNF57:NM_173480:exon4:c.C668A:p.T223N	exonic	ENSG00000171970	NA	nonsynonymous SNV	ENSG00000171970:ENST00000306908:exon4:c.C668A:p.T223N,ENSG00000171970:ENST00000523428:exon4:c.C572A:p.T191N	NA	NA	19p13.3	NA	Name=ZNF274	NA	NA	rs2288958	0.47	0.47	0.431	0.468251	0.4642	0.631	0.5447	0.2398	0.5593	0.47	0.65	0.52	0.23	0.4831	0.65	0.02	D	0.002	B	0.003	B	.	.	1.000	P	0.77	N	2.43	T	-0.962	T	0.000	T	0.029	2.112	13.02	-4.04	-1.718	-2.633	4.722	2.111658	2.111658	0.22	0.447093	0.273264	NA	0.522	NA	10.9389404
558	12	64746833	64746833	C	T	exonic	C12orf56	NA	nonsynonymous SNV	C12orf56:NM_001099676:exon2:c.G256A:p.D86N,C12orf56:NM_001170633:exon2:c.G256A:p.D86N	exonic	ENSG00000185306	NA	nonsynonymous SNV	ENSG00000185306:ENST00000333722:exon2:c.G256A:p.D86N,ENSG00000185306:ENST00000543259:exon2:c.G217A:p.D73N,ENSG00000185306:ENST00000543942:exon2:c.G256A:p.D86N	Score=472;Name=lod=111	NA	12q14.2	NA	NA	NA	NA	rs73118352	0.15	0.15	0.132	0.165335	0.1372	0.2669	0.1888	0.1014	0.1595	0.14	0.24	0.15	0.07	0.1402	0.24	.	.	0.213	B	0.126	B	0.010	N	0.959	P	1.275	L	.	.	-1.063	T	0.000	T	0.07	1.307	10.28	3.83	2.439	2.873	11.539	1.306739	1.306739	0.98	0.11746	0.093561	NA	0.065	NA	10.9384734
558	9	7174673	7174673	G	A	exonic	KDM4C	NA	nonsynonymous SNV	KDM4C:NM_015061:exon22:c.G3115A:p.V1039I	exonic	ENSG00000107077	NA	nonsynonymous SNV	ENSG00000107077:ENST00000428870:exon15:c.G2176A:p.V726I,ENSG00000107077:ENST00000442236:exon20:c.G2350A:p.V784I,ENSG00000107077:ENST00000381309:exon22:c.G3115A:p.V1039I	Score=459;Name=lod=98	NA	9p24.1	Score=747;Name=V$STAT5A_02	NA	NA	NA	rs913588	0.34	0.34	0.326	0.318291	0.4751	0.1151	0.3919	0.3215	0.3098	0.5	0.13	0.37	0.34	0.4226	0.5	0.25	T	0.278	B	0.057	B	0.005	N	0.000	P	-0.695	N	1.37	T	-0.987	T	0.000	T	0.129	1.741	11.78	4.74	2.671	2.329	11.194	1.740653	1.740653	0.41	0.497558	0.350885	NA	0.384	NA	10.9380754
558	2	130897218	130897218	T	C	exonic	CCDC74B	NA	synonymous SNV	CCDC74B:NM_001258307:exon8:c.A855G:p.A285A,CCDC74B:NM_207310:exon8:c.A1053G:p.A351A	exonic	ENSG00000152076	NA	synonymous SNV	ENSG00000152076:ENST00000392984:exon7:c.A1359G:p.A453A,ENSG00000152076:ENST00000310463:exon8:c.A1053G:p.A351A,ENSG00000152076:ENST00000409943:exon8:c.A855G:p.A285A	NA	NA	2q21.1	NA	NA	Name=4	NA	rs13006246	0.14	0.14	0.109	0.109625	0.2863	0.0288	0.1873	0.025	0.0706	0.25	0.04	0.22	0.03	0.1835	0.26	0	D	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.039	T	0.000	T	.	-1.04	0.207	-9.37	-3.106	-1.147	2.014	-1.039639	NA	0	0.261689	0.066561	NA	0.007	NA	10.9351776
559	11	56431216	56431216	C	T	exonic	OR5AR1	NA	stopgain	OR5AR1:NM_001004730:exon1:c.C55T:p.Q19X	exonic	ENSG00000172459	NA	stopgain	ENSG00000172459:ENST00000302969:exon1:c.C55T:p.Q19X	Score=471;Name=lod=109	NA	11q12.1	NA	NA	NA	NA	rs11228710	0.62	0.62	0.587	0.623003	0.6879	0.7857	0.7406	0.2716	0.7802	0.68	0.8	0.75	0.24	0.6887	0.8	0.02	D	.	.	.	.	0.000	D	0.000	P	.	.	.	.	.	.	.	.	.	3.835	19.48	5.33	2.780	0.906	14.481	3.834831	3.834831	0.01	0.689479	0.337801	NA	0.58	NA	10.933921
560	2	163208893	163208893	T	G	exonic	GCA	NA	nonsynonymous SNV	GCA:NM_012198:exon3:c.T238G:p.S80A	exonic	ENSG00000115271	NA	nonsynonymous SNV	ENSG00000115271:ENST00000233612:exon3:c.T181G:p.S61A,ENSG00000115271:ENST00000429691:exon3:c.T181G:p.S61A,ENSG00000115271:ENST00000437150:exon3:c.T238G:p.S80A,ENSG00000115271:ENST00000446271:exon3:c.T316G:p.S106A,ENSG00000115271:ENST00000453113:exon4:c.T181G:p.S61A	Score=621;Name=lod=445	NA	2q24.2	NA	NA	NA	NA	rs17783344	0.07	0.07	0.057	0.0521166	0.1571	0.003	0.0749	0.0068	0.0399	0.15	0.0017	0.09	0.002	0.1068	0.15	0.42	T	0.001	B	0.006	B	0.066	U	0.009	P	1.39	L	-1.06	T	-0.994	T	0.003	T	0.216	1.746	11.8	5.19	1.951	1.858	10.265	1.74638	1.74638	0.1	0.145	0.031775	NA	0.051	NA	10.9244334
560	9	33386510	33386510	C	T	exonic	AQP7	NA	nonsynonymous SNV	AQP7:NM_001170:exon5:c.G298A:p.A100T	exonic	ENSG00000165269	NA	nonsynonymous SNV	ENSG00000165269:ENST00000379503:exon2:c.G106A:p.A36T,ENSG00000165269:ENST00000439678:exon2:c.G22A:p.A8T,ENSG00000165269:ENST00000379506:exon3:c.G295A:p.A99T,ENSG00000165269:ENST00000379507:exon3:c.G295A:p.A99T,ENSG00000165269:ENST00000377425:exon4:c.G127A:p.A43T,ENSG00000165269:ENST00000537089:exon4:c.G22A:p.A8T,ENSG00000165269:ENST00000541274:exon4:c.G22A:p.A8T,ENSG00000165269:ENST00000297988:exon5:c.G298A:p.A100T,ENSG00000165269:ENST00000539936:exon5:c.G298A:p.A100T	NA	NA	9p13.3	Score=722;Name=V$HOX13_01	NA	NA	NA	rs77962308	NA	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4118	NA	0.42	T	0.022	B	0.077	B	0.001	N	1.000	P	.	.	-2.52	D	-0.587	T	0.452	T	0.523	-0.191	3.072	-2.38	-0.529	-1.493	9.755	-0.190807	NA	0.25	NA	NA	ID=COSM1716043;OCCURENCE=1(small_intestine)	NA	NA	10.9215334
560	10	12143105	12143105	C	G	exonic	DHTKD1	NA	nonsynonymous SNV	DHTKD1:NM_018706:exon10:c.C1821G:p.I607M	exonic	ENSG00000181192	NA	nonsynonymous SNV	ENSG00000181192:ENST00000263035:exon10:c.C1821G:p.I607M	Score=471;Name=lod=109	NA	10p14	Score=921;Name=V$OCT1_06	NA	NA	NA	rs2062988	0.72	0.72	0.727	0.724042	0.8191	0.7054	0.6873	0.5545	0.9008	0.82	0.71	0.73	0.59	0.7788	0.82	0.22	T	0.0	B	0.001	B	0.000	N	0.608	P	-1.3	N	-2.85	D	-1.044	T	0.000	T	0.353	0.86	8.483	5.48	1.336	7.152	14.857	0.860296	NA	1	0.814186	0.601226	NA	0.725	NA	10.9212474
561	6	24463020	24463020	G	C	exonic	GPLD1	NA	nonsynonymous SNV	GPLD1:NM_001503:exon11:c.C825G:p.D275E	exonic	ENSG00000112293	NA	nonsynonymous SNV	ENSG00000112293:ENST00000230036:exon11:c.C825G:p.D275E	Score=289;Name=lod=20	NA	6p22.3	NA	NA	NA	NA	rs17300770	0.11	0.11	0.084	0.0966454	0.169	0.1022	0.0965	0.0212	0.1186	0.17	0.1	0.1	0.02	0.121	0.17	0.87	T	0.418	B	0.154	B	0.281	N	0.000	P	1.845	L	-0.09	T	-1.038	T	0.072	T	0.034	-0.168	3.182	4.14	1.506	1.284	5.096	-0.167636	NA	0.47	0.128372	0.037676	NA	0.109	NA	10.9149614
561	6	7374207	7374207	T	G	exonic	CAGE1	NA	nonsynonymous SNV	CAGE1:NM_205864:exon4:c.A437C:p.E146A,CAGE1:NM_001170692:exon5:c.A845C:p.E282A,CAGE1:NM_001170693:exon5:c.A845C:p.E282A	exonic	ENSG00000164304	NA	nonsynonymous SNV	ENSG00000164304:ENST00000296742:exon4:c.A437C:p.E146A,ENSG00000164304:ENST00000338150:exon5:c.A845C:p.E282A,ENSG00000164304:ENST00000379918:exon5:c.A845C:p.E282A,ENSG00000164304:ENST00000458291:exon5:c.A845C:p.E282A,ENSG00000164304:ENST00000502583:exon5:c.A845C:p.E282A,ENSG00000164304:ENST00000512086:exon5:c.A845C:p.E282A,ENSG00000164304:ENST00000512691:exon5:c.A881C:p.E294A	NA	NA	6p24.3	NA	Name=PU.1,ELF1_(SC-631)	Name=9	NA	rs2876098	0.13	0.13	0.11	0.102436	0.1491	0.1062	0.1455	0.0703	0.0634	0.16	0.11	0.15	0.09	0.1341	0.16	0.06	T	0.908	P	0.453	P	0.154	N	1.000	P	1.735	L	1.33	T	-1.094	T	0.047	T	0.138	3.071	16.25	3.23	0.410	0.785	7.542	3.071426	3.071426	0.03	0.142151	0.09165	NA	0.094	NA	10.9079824
561	17	1540106	1540106	G	A	exonic	SCARF1	NA	nonsynonymous SNV	SCARF1:NM_145350:exon10:c.C1493T:p.S498L	exonic	ENSG00000074660	NA	nonsynonymous SNV	ENSG00000074660:ENST00000571272:exon10:c.C1493T:p.S498L	Score=552;Name=lod=233	NA	17p13.3	NA	NA	NA	NA	rs34849297	0.08	0.08	0.079	0.0527157	0.159	0.001	0.0865	0.0053	0.0368	0.16	NA	0.12	0.01	0.1072	0.16	0.03	D	0.083	B	0.017	B	.	.	0.000	P	.	.	.	.	-1.058	T	0.001	T	.	2.856	15.51	-2.06	-0.203	-1.417	11.084	2.855703	2.855703	0.04	0.159302	0.031094	NA	0.116	NA	10.9078314
561	5	7885959	7885959	A	G	exonic	MTRR	NA	nonsynonymous SNV	MTRR:NM_002454:exon7:c.A1049G:p.K350R,MTRR:NM_024010:exon7:c.A1130G:p.K377R	exonic	ENSG00000124275	NA	nonsynonymous SNV	ENSG00000124275:ENST00000264668:exon7:c.A1130G:p.K377R,ENSG00000124275:ENST00000440940:exon7:c.A1049G:p.K350R	Score=423;Name=lod=70	NA	5p15.31	NA	NA	NA	NA	rs162036	0.23	0.23	0.218	0.253195	0.1362	0.1687	0.3516	0.4365	0.1431	0.13	0.18	0.31	0.39	0.1711	0.39	0.35	T	0.281	B	0.139	B	0.006	N	0.000	P	2.07	M	1.45	T	-0.941	T	0.000	T	0.231	1.635	11.42	-2.24	-0.619	1.230	11.376	1.634585	1.634585	0.07	0.118488	0.377213	NA	0.348	NA	10.9075454
561	3	119150836	119150836	C	T	exonic	TMEM39A	NA	nonsynonymous SNV	TMEM39A:NM_018266:exon9:c.G1459A:p.A487T	exonic	ENSG00000176142	NA	nonsynonymous SNV	ENSG00000176142:ENST00000319172:exon9:c.G1459A:p.A487T	Score=762;Name=lod=1673	NA	3q13.33	NA	NA	NA	NA	rs1132200	0.09	0.09	0.086	0.0886581	0.1441	0.0724	0.0663	0.0083	0.1728	0.14	0.08	0.09	0.01	0.1227	0.16	0.22	T	0.043	B	0.027	B	0.020	N	0.026	P	0	N	0.82	T	-1.102	T	0.000	T	0.139	3.021	16.08	5.65	2.941	2.236	14.482	3.021427	3.021427	0.05	0.159572	0.035633	NA	0.051	NA	10.9069614
562	4	83582064	83582064	G	T	exonic	SCD5	NA	nonsynonymous SNV	SCD5:NM_024906:exon4:c.C736A:p.L246M	exonic	ENSG00000145284	NA	nonsynonymous SNV	ENSG00000145284:ENST00000273908:exon4:c.C736A:p.L246M	NA	NA	4q21.22	NA	NA	NA	NA	rs3733228	0.33	0.33	0.283	0.302716	0.2913	0.4762	0.487	0.0794	0.3067	0.3	0.49	0.45	0.1	0.3256	0.49	0.03	D	0.471	P	0.323	B	.	.	0.012	P	.	.	.	.	-0.883	T	0.000	T	0.03	0.735	7.902	3.92	2.502	1.546	11.799	0.734689	NA	0	0.311744	0.105311	NA	0.239	NA	10.9046894
562	4	2176454	2176454	G	A	exonic	POLN	NA	nonsynonymous SNV	POLN:NM_181808:exon8:c.C1273T:p.R425C	exonic	ENSG00000130997	NA	nonsynonymous SNV	ENSG00000130997:ENST00000382865:exon8:c.C1273T:p.R425C,ENSG00000130997:ENST00000511885:exon10:c.C1273T:p.R425C	Score=507;Name=lod=153	NA	4p16.3	NA	NA	NA	NA	rs9328764	0.31	0.31	0.312	0.321885	0.1243	0.373	0.2435	0.5703	0.1922	0.13	0.37	0.25	0.57	0.1905	0.57	0.31	T	0.0	B	0.001	B	0.008	N	0.999	P	0.745	N	3.0	T	-0.974	T	0.000	T	0.395	1.92	12.38	4.48	0.984	1.365	6.711	1.919595	1.919595	0.18	0.115698	0.503858	NA	0.384	NA	10.9028354
562	10	55955610	55955610	C	T	exonic	PCDH15	NA	nonsynonymous SNV	PCDH15:NM_001142767:exon10:c.G1027A:p.G343S,PCDH15:NM_001142768:exon10:c.G1072A:p.G358S,PCDH15:NM_001142773:exon10:c.G1072A:p.G358S,PCDH15:NM_001142764:exon11:c.G1138A:p.G380S,PCDH15:NM_001142765:exon11:c.G1138A:p.G380S,PCDH15:NM_001142766:exon11:c.G1138A:p.G380S,PCDH15:NM_033056:exon11:c.G1138A:p.G380S,PCDH15:NM_001142763:exon12:c.G1153A:p.G385S	exonic	ENSG00000150275	NA	nonsynonymous SNV	ENSG00000150275:ENST00000395432:exon10:c.G1027A:p.G343S,ENSG00000150275:ENST00000395433:exon10:c.G1072A:p.G358S,ENSG00000150275:ENST00000320301:exon11:c.G1138A:p.G380S,ENSG00000150275:ENST00000361849:exon11:c.G1138A:p.G380S,ENSG00000150275:ENST00000373955:exon11:c.G1138A:p.G380S,ENSG00000150275:ENST00000373965:exon11:c.G1138A:p.G380S,ENSG00000150275:ENST00000395430:exon11:c.G1138A:p.G380S,ENSG00000150275:ENST00000395438:exon11:c.G1138A:p.G380S,ENSG00000150275:ENST00000395440:exon11:c.G1138A:p.G380S,ENSG00000150275:ENST00000395445:exon11:c.G1138A:p.G380S,ENSG00000150275:ENST00000395446:exon11:c.G1138A:p.G380S,ENSG00000150275:ENST00000437009:exon11:c.G1138A:p.G380S,ENSG00000150275:ENST00000448885:exon11:c.G1138A:p.G380S,ENSG00000150275:ENST00000373957:exon13:c.G1072A:p.G358S,ENSG00000150275:ENST00000414778:exon13:c.G1153A:p.G385S	Score=432;Name=lod=76	NA	10q21.1	NA	NA	NA	NA	rs10825269	0.21	0.21	0.225	0.243211	0.1382	0.0863	0.2104	0.4871	0.2065	0.13	0.09	0.19	0.48	0.1656	0.48	0.93	T	0.017	B	0.004	B	.	.	0.000	P	0.11	N	2.53	T	-0.951	T	0.000	T	0.096	0.328	5.78	5.17	0.823	2.210	10.723	0.328284	NA	0.78	0.128023	0.441897	NA	0.217	CLINSIG=non-pathogenic|untested;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|not;CLNACC=RCV000039695.1|RCV000086940.1;CLNDSDB=.|.;CLNDSDBID=.|.	10.9015104
562	12	49580180	49580180	T	C	exonic	TUBA1A	NA	synonymous SNV	TUBA1A:NM_001270399:exon3:c.A288G:p.K96K,TUBA1A:NM_001270400:exon3:c.A183G:p.K61K,TUBA1A:NM_006009:exon3:c.A288G:p.K96K	exonic	ENSG00000167552	NA	nonsynonymous SNV	ENSG00000167552:ENST00000546918:exon2:c.A440G:p.K147R	Score=667;Name=lod=686	NA	12q13.12	NA	Name=ZNF263	NA	NA	rs1056875	0.49	0.49	0.496	0.55631	0.3439	0.6925	0.366	0.6952	0.5818	0.32	0.69	0.36	0.61	0.4258	0.69	0	D	.	.	.	.	0.000	D	0.000	P	.	.	0.02	T	-0.921	T	0.000	T	.	1.182	9.806	3.41	0.327	0.876	9.420	1.181768	NA	NA	0.33	0.66069	NA	0.536	NA	10.9003
562	12	52938497	52938497	A	C	exonic	KRT71	NA	nonsynonymous SNV	KRT71:NM_033448:exon9:c.T1391G:p.V464G	exonic	ENSG00000139648	NA	nonsynonymous SNV	ENSG00000139648:ENST00000267119:exon9:c.T1391G:p.V464G	Score=363;Name=lod=40	NA	12q13.13	NA	Name=CTCF,c-Myc	Name=8	NA	rs10783518	0.39	0.39	0.321	0.327276	0.507	0.5	0.4712	0.028	0.2669	0.51	0.47	0.5	0.05	0.4448	0.51	0.41	T	0.0	B	0.0	B	0.019	N	0.943	P	-1.04	N	-1.41	T	-0.923	T	0.000	T	0.094	0.067	4.361	2.61	0.136	2.480	6.539	0.06657	NA	0.37	0.481442	0.095172	NA	0.377	NA	10.9000914
562	7	27196113	27196113	C	T	exonic	HOXA7	NA	nonsynonymous SNV	HOXA7:NM_006896:exon1:c.G52A:p.A18T	exonic	ENSG00000122592	NA	nonsynonymous SNV	ENSG00000122592:ENST00000242159:exon1:c.G52A:p.A18T,ENSG00000122592:ENST00000519842:exon3:c.G52A:p.A18T	Score=794;Name=lod=2245	NA	7p15.2	NA	Name=TBP,GTF2F1_(RAP-74)	Name=73	NA	rs2301721	0.66	0.66	0.65	0.618411	0.83	0.8581	0.6499	0.1014	0.8303	0.83	0.84	0.67	0.16	0.7691	0.84	0.41	T	0.08	B	0.015	B	0.001	N	0.016	P	0.55	N	1.58	T	-1.013	T	0.000	T	0.262	2.174	13.23	4.34	1.341	2.781	13.662	2.173748	2.173748	0.26	0.835467	0.21	NA	0.601	NA	10.8987664
562	5	149759096	149759096	T	C	exonic	TCOF1	NA	nonsynonymous SNV	TCOF1:NM_000356:exon16:c.T2429C:p.V810A,TCOF1:NM_001135245:exon16:c.T2429C:p.V810A,TCOF1:NM_001008657:exon17:c.T2660C:p.V887A,TCOF1:NM_001135243:exon17:c.T2660C:p.V887A,TCOF1:NM_001135244:exon17:c.T2660C:p.V887A,TCOF1:NM_001195141:exon17:c.T2660C:p.V887A	exonic	ENSG00000070814	NA	nonsynonymous SNV	ENSG00000070814:ENST00000323668:exon16:c.T2429C:p.V810A,ENSG00000070814:ENST00000445265:exon16:c.T2429C:p.V810A,ENSG00000070814:ENST00000377797:exon17:c.T2660C:p.V887A,ENSG00000070814:ENST00000394269:exon17:c.T2660C:p.V887A,ENSG00000070814:ENST00000427724:exon17:c.T2660C:p.V887A,ENSG00000070814:ENST00000439160:exon17:c.T2660C:p.V887A,ENSG00000070814:ENST00000451292:exon17:c.T2660C:p.V887A,ENSG00000070814:ENST00000504761:exon17:c.T2660C:p.V887A,ENSG00000070814:ENST00000513346:exon17:c.T2660C:p.V887A	NA	NA	5q32	NA	NA	NA	NA	rs7713638	0.15	0.15	0.131	0.16274	0.1302	0.1448	0.0937	0.2534	0.1411	0.12	0.1	0.11	0.26	0.1466	0.26	0.34	T	0.0	B	0.004	B	0.723	N	1.000	P	1.185	L	-0.04	T	-1.093	T	0.000	T	0.247	1.117	9.555	-7.47	-1.851	-4.376	13.724	1.116955	NA	0.34	0.158372	0.255334	NA	0.13	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118610.2;CLNDSDB=.;CLNDSDBID=.	10.8981614
563	17	38028634	38028634	G	T	exonic	ZPBP2	NA	nonsynonymous SNV	ZPBP2:NM_198844:exon4:c.G452T:p.S151I,ZPBP2:NM_199321:exon5:c.G518T:p.S173I	exonic	ENSG00000186075	NA	nonsynonymous SNV	ENSG00000186075:ENST00000583811:exon2:c.G164T:p.S55I,ENSG00000186075:ENST00000377940:exon4:c.G452T:p.S151I,ENSG00000186075:ENST00000348931:exon5:c.G518T:p.S173I	Score=513;Name=lod=162	NA	17q12	Score=797;Name=V$GFI1_01	NA	NA	NA	rs11557467	0.41	0.41	0.399	0.379593	0.508	0.2817	0.3862	0.3865	0.3344	0.52	0.31	0.4	0.35	0.4459	0.52	0.02	D	0.295	B	0.266	B	0.005	N	0.973	P	0.345	N	0.57	T	-0.920	T	0.000	T	0.316	0.151	4.814	4.4	0.900	3.003	8.372	0.151266	NA	0.11	0.487442	0.326146	NA	0.37	NA	10.8919914
563	13	32371361	32371361	A	G	exonic	RXFP2	NA	nonsynonymous SNV	RXFP2:NM_001166058:exon16:c.A1738G:p.I580V,RXFP2:NM_130806:exon17:c.A1810G:p.I604V	exonic	ENSG00000133105	NA	nonsynonymous SNV	ENSG00000133105:ENST00000380314:exon16:c.A1738G:p.I580V,ENSG00000133105:ENST00000298386:exon17:c.A1810G:p.I604V	Score=593;Name=lod=343	NA	13q13.1	NA	Name=CTCF	Name=105	NA	rs17076657	0.15	0.15	0.127	0.139776	0.1551	0.1905	0.1657	0.1021	0.1043	0.15	0.19	0.15	0.11	0.1487	0.19	0.75	T	0.005	B	0.02	B	0.002	N	0.417	P	0.75	N	1.19	T	-1.010	T	0.000	T	0.097	1.408	10.64	1.75	0.439	1.108	6.411	1.408258	1.408258	0.33	0.142674	0.149796	NA	0.145	NA	10.8868594
563	7	48311563	48311563	T	G	exonic	ABCA13	NA	nonsynonymous SNV	ABCA13:NM_152701:exon17:c.T2300G:p.I767S	exonic	ENSG00000179869	NA	nonsynonymous SNV	ENSG00000179869:ENST00000435803:exon17:c.T2300G:p.I767S	NA	NA	7p12.3	NA	NA	NA	NA	rs17712293	0.18	0.18	0.163	0.194489	0.1322	0.2153	0.2709	0.1543	0.2372	0.13	0.23	0.25	0.17	0.1728	0.25	0.01	D	0.294	B	0.057	B	0.852	N	1.000	P	1.245	L	-2.16	D	-1.085	T	0.000	T	0.138	0.703	7.752	3.42	1.029	0.606	7.492	0.70348	NA	0	0.142524	0.161805	NA	0.159	NA	10.8858094
564	7	154379739	154379739	C	T	intronic	DPP6	NA	NA	NA	exonic	ENSG00000130226	NA	nonsynonymous SNV	ENSG00000130226:ENST00000406326:exon6:c.C1007T:p.P336L	NA	NA	7q36.2	NA	NA	Name=3	NA	rs75213895	0.07	0.07	0.06	0.0830671	0.0954	0.0069	0.2176	0.0681	0.0736	0.09	0.0017	0.18	0.05	0.0909	0.18	0	D	0.0	B	0.0	B	.	.	1.000	P	.	.	.	.	-1.004	T	0.000	T	0.028	0.367	5.993	-6.29	-1.780	-1.569	0.953	0.367225	NA	0	0.095681	0.07363	NA	0.08	NA	10.8846857
564	17	80352303	80352303	G	A	exonic	OGFOD3	NA	nonsynonymous SNV	OGFOD3:NM_175902:exon9:c.C940T:p.P314S	exonic	ENSG00000181396	NA	nonsynonymous SNV	ENSG00000181396:ENST00000329197:exon9:c.C940T:p.P314S	NA	NA	17q25.3	NA	Name=ERalpha_a	Name=3	NA	rs62079523	0.19	0.19	0.179	0.1873	0.325	0.003	0.1974	0.1543	0.273	0.33	0.0017	0.21	0.16	0.2772	0.35	0.04	D	0.648	P	0.127	B	0.001	D	1.000	P	.	.	1.41	T	-0.930	T	0.000	T	0.054	0.714	7.804	-0.635	-0.123	-0.380	3.661	0.714279	NA	0	0.348488	0.191784	NA	0.174	NA	10.8826454
564	5	80631642	80631642	C	T	exonic	ACOT12	NA	nonsynonymous SNV	ACOT12:NM_130767:exon12:c.G1207A:p.A403T	exonic	ENSG00000172497	NA	nonsynonymous SNV	ENSG00000172497:ENST00000307624:exon12:c.G1207A:p.A403T	NA	NA	5q14.1	Score=987;Name=V$GATA6_01	NA	NA	NA	rs10371	0.12	0.12	0.118	0.120208	0.159	0.002	0.134	0.1815	0.1094	0.15	0.0035	0.14	0.17	0.1359	0.19	0.22	T	0.051	B	0.077	B	0.002	N	0.041	P	0.77	N	1.5	T	-1.036	T	0.000	T	0.032	0.609	7.282	4.34	1.275	1.926	11.145	0.609265	NA	0.13	0.156395	0.192692	NA	0.203	NA	10.8820384
564	9	109687403	109687403	A	G	exonic	ZNF462	NA	nonsynonymous SNV	ZNF462:NM_021224:exon3:c.A1210G:p.M404V	exonic	ENSG00000148143	NA	nonsynonymous SNV	ENSG00000148143:ENST00000277225:exon3:c.A1210G:p.M404V,ENSG00000148143:ENST00000457913:exon3:c.A1210G:p.M404V	Score=646;Name=lod=564	NA	9q31.2	Score=880;Name=V$NKX22_01	NA	NA	NA	rs17723637	0.12	0.12	0.115	0.121406	0.167	0.0804	0.0994	0.0726	0.1984	0.18	0.08	0.12	0.07	0.1386	0.18	.	.	0.002	B	0.014	B	0.001	D	0.000	P	0.695	N	3.97	T	-0.899	T	0.000	T	0.14	1.32	10.33	0.684	-0.119	1.389	9.001	1.320087	1.320087	0	0.146512	0.079891	ID=COSM150663;OCCURENCE=1(stomach)	0.109	NA	10.8812214
564	12	52639302	52639302	G	C	exonic	KRT7	NA	nonsynonymous SNV	KRT7:NM_005556:exon7:c.G1091C:p.G364A	exonic	ENSG00000135480	NA	nonsynonymous SNV	ENSG00000135480:ENST00000331817:exon7:c.G1091C:p.G364A	Score=518;Name=lod=170	NA	12q13.13	NA	Name=Pol2,CTCF	Name=6	NA	rs2608009	0.87	0.87	0.892	0.892173	0.8171	0.9067	0.8458	0.9773	0.8722	0.83	0.89	0.79	0.98	0.8372	0.98	1	T	0.0	B	0.0	B	0.165	N	1.000	P	-3.39	N	-1.01	T	-0.915	T	0.000	T	0.043	0.198	5.066	3.43	1.232	4.688	15.086	0.197835	NA	1	0.802326	0.937131	NA	0.841	NA	10.8767074
564	6	29142064	29142064	A	G	exonic	OR2J2	NA	nonsynonymous SNV	OR2J2:NM_030905:exon1:c.A652G:p.T218A	exonic	ENSG00000204700	NA	nonsynonymous SNV	ENSG00000204700:ENST00000377167:exon1:c.A652G:p.T218A	Score=272;Name=lod=17	NA	6p22.1	NA	NA	NA	NA	rs3130743	0.36	0.36	0.33	0.316494	0.5149	0.3512	0.4035	0.0408	0.3875	0.54	0.35	0.41	0.04	0.4506	0.54	0.01	D	.	.	.	.	.	.	1.000	P	3.935	H	1.22	T	-0.825	T	0.167	T	0.021	1.927	12.4	2.0	0.045	1.946	6.152	1.926755	1.926755	0.01	0.492157	0.115484	NA	0.239	NA	10.8756764
565	22	46656479	46656479	A	G	exonic	PKDREJ	NA	nonsynonymous SNV	PKDREJ:NM_006071:exon1:c.T2741C:p.L914P	exonic	ENSG00000130943	NA	nonsynonymous SNV	ENSG00000130943:ENST00000253255:exon1:c.T2741C:p.L914P	Score=376;Name=lod=45	NA	22q13.31	NA	NA	NA	NA	rs6519993	0.22	0.22	0.24	0.245407	0.16	0.001	0.134	0.6785	0.0787	0.15	NA	0.15	0.63	0.1597	0.63	1	T	0.0	B	0.0	B	0.015	N	0.186	P	-1.555	N	1.52	T	-0.950	T	0.000	T	0.092	-0.561	1.467	5.33	1.411	4.073	13.324	-0.560725	NA	1	0.146047	0.601453	NA	0.304	NA	10.8675864
565	4	186111639	186111639	T	C	exonic	KIAA1430	NA	nonsynonymous SNV	KIAA1430:NM_020827:exon2:c.A712G:p.T238A	exonic	ENSG00000164323	NA	nonsynonymous SNV	ENSG00000164323:ENST00000296775:exon2:c.A712G:p.T238A,ENSG00000164323:ENST00000458385:exon2:c.A712G:p.T238A,ENSG00000164323:ENST00000514798:exon2:c.A712G:p.T238A	NA	NA	4q35.1	NA	Name=eGFP-GATA2,GATA-1	Name=2	NA	rs1133657	0.47	0.47	0.456	0.430511	0.4771	0.5823	0.5159	0.2489	0.411	0.46	0.61	0.48	0.29	0.4797	0.61	0.16	T	0.061	B	0.023	B	0.004	N	1.000	P	0.69	N	1.59	T	-0.953	T	0.000	T	0.011	0.372	6.022	4.35	1.020	3.595	11.184	0.372441	NA	0.32	0.511125	0.29621	NA	0.529	NA	10.8654084
566	11	1858572	1858572	C	T	exonic	SYT8	NA	nonsynonymous SNV	SYT8:NM_138567:exon9:c.C1117T:p.R373W	exonic	ENSG00000149043	NA	nonsynonymous SNV	ENSG00000149043:ENST00000341958:exon8:c.C1075T:p.R359W,ENSG00000149043:ENST00000381968:exon9:c.C1117T:p.R373W	Score=443;Name=lod=84	NA	11p15.5	Score=842;Name=V$HEN1_01	Name=CTCF	NA	NA	rs2292474	0.39	0.39	0.367	0.384984	0.498	0.378	0.415	0.1679	0.5481	0.5	0.4	0.45	0.17	0.4903	0.5	1	T	0.0	B	0.0	B	.	.	0.000	P	-3.275	N	3.77	T	-0.948	T	0.000	T	0.368	-0.659	1.107	2.68	0.174	3.304	8.520	-0.659353	NA	1	0.480756	0.208372	NA	0.326	NA	10.8642774
566	6	160113872	160113872	A	G	exonic	SOD2	NA	nonsynonymous SNV	SOD2:NM_000636:exon2:c.T47C:p.V16A,SOD2:NM_001024465:exon2:c.T47C:p.V16A,SOD2:NM_001024466:exon2:c.T47C:p.V16A	exonic	ENSG00000112096	NA	nonsynonymous SNV	ENSG00000112096:ENST00000337404:exon2:c.T47C:p.V16A,ENSG00000112096:ENST00000367054:exon2:c.T47C:p.V16A,ENSG00000112096:ENST00000367055:exon2:c.T47C:p.V16A,ENSG00000112096:ENST00000444946:exon2:c.T47C:p.V16A,ENSG00000112096:ENST00000452684:exon2:c.T47C:p.V16A,ENSG00000112096:ENST00000535561:exon2:c.T116C:p.V39A,ENSG00000112096:ENST00000538183:exon2:c.T47C:p.V16A,ENSG00000112096:ENST00000545162:exon2:c.T116C:p.V39A,ENSG00000112096:ENST00000546260:exon2:c.T47C:p.V16A	NA	NA	6q25.3	NA	Name=Pol2,c-Myc,Sin3Ak-20	Name=100	NA	rs4880	0.37	0.37	0.358	0.410743	0.4662	0.125	0.5836	0.4236	0.5082	0.46	0.11	0.54	0.41	0.5024	0.54	0.73	T	0.024	B	0.014	B	0.003	N	0.812	P	.	.	2.8	T	-0.931	T	0.008	T	0.209	1.174	9.777	3.08	0.205	2.565	9.062	1.174329	NA	0.81	0.500465	0.419655	NA	0.37	CLINSIG=non-pathogenic|other;CLNDBN=SUPEROXIDE_DISMUTASE_2_POLYMORPHISM|Microvascular_complications_of_diabetes_6;CLNREVSTAT=single|single;CLNACC=RCV000015872.1|RCV000015873.1;CLNDSDB=.|MedGen:OMIM;CLNDSDBID=.|CN031984:612634	10.8642684
566	11	100933412	100933412	C	A	exonic	PGR	NA	nonsynonymous SNV	PGR:NM_000926:exon4:c.G1978T:p.V660L,PGR:NM_001202474:exon4:c.G1486T:p.V496L,PGR:NM_001271162:exon4:c.G196T:p.V66L	exonic	ENSG00000082175	NA	nonsynonymous SNV	ENSG00000082175:ENST00000528960:exon3:c.G1861T:p.V621L,ENSG00000082175:ENST00000325455:exon4:c.G1978T:p.V660L,ENSG00000082175:ENST00000534013:exon4:c.G196T:p.V66L,ENSG00000082175:ENST00000534780:exon4:c.G1978T:p.V660L	Score=448;Name=lod=88	NA	11q22.1	NA	NA	NA	NA	rs1042838	0.09	0.09	0.084	0.0714856	0.1789	0.0099	0.1369	0.0061	0.0665	0.19	0.01	0.15	0.01	0.1258	0.19	0.32	T	0.006	B	0.004	B	0.357	N	0.000	P	1.38	L	-1.67	D	-1.017	T	0.001	T	0.049	1.681	11.58	4.49	2.512	0.674	5.311	1.681111	1.681111	0.09	0.164419	0.029959	NA	0.101	NA	10.8642144
566	7	30831082	30831082	C	T	exonic	FAM188B	NA	nonsynonymous SNV	FAM188B:NM_032222:exon5:c.C965T:p.T322M	exonic	ENSG00000106125	NA	nonsynonymous SNV	ENSG00000106125:ENST00000265299:exon5:c.C965T:p.T322M	NA	NA	7p14.3	NA	Name=CTCF	Name=7	NA	rs12701034	0.46	0.46	0.441	0.502995	0.4801	0.1627	0.4424	0.8048	0.5123	0.48	0.17	0.46	0.75	0.4887	0.76	0	D	0.012	B	0.003	B	0.347	N	1.000	P	0	N	4.1	T	-1.027	T	0.000	T	0.046	0.684	7.655	-2.83	-0.654	-1.912	1.041	0.683653	NA	0.03	0.50262	0.76395	NA	0.406	NA	10.8619134
566	19	10670184	10670184	C	G	exonic	KRI1	NA	nonsynonymous SNV	KRI1:NM_023008:exon12:c.G1063C:p.E355Q	exonic	ENSG00000129347	NA	nonsynonymous SNV	ENSG00000129347:ENST00000361821:exon11:c.G1051C:p.E351Q,ENSG00000129347:ENST00000312962:exon12:c.G1063C:p.E355Q	Score=546;Name=lod=221	NA	19p13.2	NA	NA	NA	NA	rs3826709	0.62	0.62	0.621	0.622204	0.4523	0.755	0.6441	0.7247	0.5061	0.47	0.77	0.59	0.73	0.5405	0.77	0.1	T	0.187	B	0.069	B	0.000	D	0.006	P	1.82	L	1.2	T	-1.021	T	0.000	T	0.164	1.832	12.08	4.97	2.306	4.333	17.055	1.83156	1.83156	0.17	0.478721	0.707898	NA	0.522	NA	10.8618124
566	21	43187167	43187167	G	C	exonic	RIPK4	NA	nonsynonymous SNV	RIPK4:NM_020639:exon1:c.C35G:p.A12G	exonic	ENSG00000183421	NA	nonsynonymous SNV	ENSG00000183421:ENST00000332512:exon1:c.C35G:p.A12G,ENSG00000183421:ENST00000352483:exon1:c.C35G:p.A12G	Score=490;Name=lod=131	NA	21q22.3	NA	Name=GABP,TAF1,Pol2,JunD,HA-E2F1,Pol2-4H8,HEY1,ZEB1_(SC-25388),TBP	NA	NA	rs6586239	0.12	0.12	0.127	0.122604	0.1561	NA	0.1095	0.2073	0.1094	0.16	NA	0.12	0.21	0.1602	0.21	1	T	0.0	B	0.0	B	0.002	N	0.000	P	-2.19	N	2.42	T	-0.944	T	0.000	T	0.074	1.037	9.236	3.68	0.548	4.871	12.165	1.0371	NA	1	0.158042	0.178832	ID=COSM1414217,COSM1414218;OCCURENCE=1(large_intestine)	0.014	NA	10.8589914
566	2	71351403	71351403	C	A	exonic	MCEE	NA	nonsynonymous SNV	MCEE:NM_032601:exon2:c.G311T:p.R104L	exonic	ENSG00000124370	NA	nonsynonymous SNV	ENSG00000124370:ENST00000244217:exon2:c.G311T:p.R104L,ENSG00000124370:ENST00000494660:exon2:c.G26T:p.R9L,ENSG00000124370:ENST00000486135:exon3:c.G26T:p.R9L	NA	NA	2p13.3	Score=756;Name=V$PAX6_01	NA	NA	NA	rs6748672	0.17	0.17	0.16	0.201478	0.1342	0.2282	0.1729	0.2277	0.228	0.14	0.18	0.17	0.22	0.1743	0.23	0.03	D	0.01	B	0.005	B	0.322	N	1.000	P	0.255	N	-0.1	T	-1.081	T	0.000	T	0.056	1.241	10.04	-4.61	-1.053	0.803	6.804	1.241494	1.241494	0.04	0.168488	0.227644	NA	0.203	NA	10.8563454
566	1	75214441	75214441	A	G	exonic	TYW3	NA	nonsynonymous SNV	TYW3:NM_001162916:exon3:c.A262G:p.M88V,TYW3:NM_138467:exon4:c.A361G:p.M121V	exonic	ENSG00000162623	NA	nonsynonymous SNV	ENSG00000162623:ENST00000457880:exon3:c.A262G:p.M88V,ENSG00000162623:ENST00000370867:exon4:c.A361G:p.M121V	Score=361;Name=lod=39	NA	1p31.1	NA	NA	NA	NA	rs1133891	0.33	0.33	0.302	0.359225	0.1262	0.7063	0.317	0.2496	0.4192	0.14	0.7	0.27	0.22	0.2399	0.7	1	T	0.0	B	0.0	B	0.000	N	0.000	P	-2.195	N	1.84	T	-0.958	T	0.005	T	0.068	-0.963	0.319	5.03	1.528	5.631	14.423	-0.962859	NA	1	0.11186	0.224013	NA	0.246	NA	10.8553734
567	8	125463250	125463250	T	C	exonic	TRMT12	NA	nonsynonymous SNV	TRMT12:NM_017956:exon1:c.T82C:p.W28R	exonic	ENSG00000183665	NA	nonsynonymous SNV	ENSG00000183665:ENST00000328599:exon1:c.T82C:p.W28R,ENSG00000183665:ENST00000522518:exon1:c.T82C:p.W28R	Score=383;Name=lod=48	NA	8q24.13	NA	Name=Pol2,NFKB,AP-2gamma,Pol2-4H8,ELK4	Name=3	NA	rs3812475	0.55	0.55	0.52	0.571086	0.495	0.4415	0.4798	0.7814	0.5634	0.5	0.42	0.52	0.8	0.5124	0.8	1	T	0.0	B	0.0	B	0.024	N	1.000	P	-2.045	N	1.13	T	-0.963	T	0.000	T	0.054	-0.892	0.456	5.15	1.515	0.518	10.538	-0.891521	NA	1	0.471977	0.694734	NA	0.5	NA	10.8539564
567	5	176637576	176637576	T	C	exonic	NSD1	NA	nonsynonymous SNV	NSD1:NM_022455:exon5:c.T2176C:p.S726P,NSD1:NM_172349:exon6:c.T1369C:p.S457P	exonic	ENSG00000165671	NA	nonsynonymous SNV	ENSG00000165671:ENST00000361032:exon2:c.T1867C:p.S623P,ENSG00000165671:ENST00000439151:exon5:c.T2176C:p.S726P,ENSG00000165671:ENST00000347982:exon6:c.T1369C:p.S457P,ENSG00000165671:ENST00000354179:exon6:c.T1369C:p.S457P	NA	NA	5q35.3	NA	NA	NA	NA	rs28932178	0.24	0.24	0.221	0.249601	0.1441	0.5119	0.2233	0.1059	0.3006	0.15	0.51	0.2	0.1	0.1987	0.51	.	.	0.999	D	0.929	D	0.125	N	1.000	P	0.695	N	-3.14	D	-1.012	T	0.000	T	0.049	0.945	8.852	1.28	0.130	0.397	4.185	0.944892	NA	0.07	0.138488	0.102587	NA	0.225	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000082108.1;CLNDSDB=.;CLNDSDBID=.	10.8520454
567	6	13801615	13801615	T	C	exonic	MCUR1	NA	nonsynonymous SNV	MCUR1:NM_001031713:exon4:c.A646G:p.T216A	exonic	ENSG00000050393	NA	nonsynonymous SNV	ENSG00000050393:ENST00000379170:exon4:c.A646G:p.T216A	Score=516;Name=lod=167	NA	6p23	Score=783;Name=V$STAT5A_02	NA	NA	NA	rs3180196	0.16	0.16	0.129	0.1248	0.1779	0.3026	0.0879	0.0068	0.0726	0.18	0.28	0.12	0.01	0.1523	0.28	0.75	T	0.267	B	0.055	B	0.007	N	0.000	P	0.145	N	1.02	T	-1.022	T	0.018	T	0.026	1.771	11.88	3.97	0.874	2.978	8.555	1.771192	1.771192	0.4	0.152594	0.03406	ID=COSM150055;OCCURENCE=1(stomach)	0.116	NA	10.8505394
567	11	124189729	124189729	C	T	exonic	OR8D2	NA	nonsynonymous SNV	OR8D2:NM_001002918:exon1:c.G365A:p.R122H	exonic	ENSG00000197263	NA	nonsynonymous SNV	ENSG00000197263:ENST00000357438:exon1:c.G365A:p.R122H	Score=472;Name=lod=110	NA	11q24.2	NA	NA	NA	NA	rs2512219	0.24	0.24	0.259	0.277556	0.1292	0.1895	0.2003	0.4531	0.3384	0.13	0.22	0.2	0.46	0.2068	0.46	0	D	0.001	B	0.001	B	0.028	N	0.305	P	2.53	M	-1.1	T	-1.006	T	0.000	T	0.038	0.938	8.823	1.61	0.473	5.273	9.523	0.938032	NA	0.02	0.14829	0.423217	NA	0.355	NA	10.8490434
568	3	182897920	182897920	A	G	exonic	MCF2L2	NA	nonsynonymous SNV	MCF2L2:NM_015078:exon28:c.T3044C:p.M1015T	exonic	ENSG00000053524	NA	nonsynonymous SNV	ENSG00000053524:ENST00000328913:exon28:c.T3044C:p.M1015T,ENSG00000053524:ENST00000473233:exon28:c.T3044C:p.M1015T	NA	NA	3q27.1	NA	Name=ZNF263	NA	NA	rs35070271	0.22	0.22	0.201	0.190495	0.171	0.3056	0.3559	0.0953	0.1033	0.18	0.33	0.3	0.1	0.1821	0.33	0.58	T	0.0	B	0.0	B	0.110	N	1.000	P	0.55	N	4.7	T	-0.913	T	0.000	T	0.095	0.749	7.97	-3.98	-1.047	-0.999	10.751	0.748863	NA	0.68	0.135349	0.123922	NA	0.283	NA	10.8448844
568	17	79089590	79089590	A	G	exonic	BAIAP2	NA	nonsynonymous SNV	BAIAP2:NM_001144888:exon14:c.A1556G:p.Q519R,BAIAP2:NM_017451:exon14:c.A1556G:p.Q519R	exonic	ENSG00000175866	NA	nonsynonymous SNV	ENSG00000175866:ENST00000392411:exon12:c.A1322G:p.Q441R,ENSG00000175866:ENST00000321300:exon14:c.A1556G:p.Q519R,ENSG00000175866:ENST00000428708:exon14:c.A1556G:p.Q519R	Score=397;Name=lod=55	NA	17q25.3	NA	NA	NA	NA	rs4969391	0.19	0.19	0.146	0.172324	0.1561	0.1478	0.3631	0.1059	0.1687	0.16	0.16	0.31	0.17	0.1823	0.31	0.27	T	0.0	B	0.001	B	0.405	N	0.000	P	-0.205	N	1.13	T	-1.032	T	0.000	T	0.216	2.343	13.79	4.96	1.862	4.516	8.529	2.343165	2.343165	0.33	0.154651	0.117113	ID=COSM1387194;OCCURENCE=1(large_intestine)	0.181	NA	10.8402824
568	9	139110654	139110654	C	T	exonic	QSOX2	NA	synonymous SNV	QSOX2:NM_181701:exon8:c.G957A:p.K319K	exonic	ENSG00000165661	NA	synonymous SNV	ENSG00000165661:ENST00000358701:exon8:c.G957A:p.K319K	Score=329;Name=lod=29	NA	9q34.3	NA	Name=CTCF,Rad21	NA	NA	rs12684650	0.17	0.17	0.162	0.153155	0.2873	0.121	0.2075	0.0098	0.2035	0.29	0.13	0.21	0.02	0.2442	0.3	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.031	T	0.000	T	.	0.262	5.417	3.96	1.032	1.654	10.232	0.262043	NA	NA	0.296744	0.062869	NA	0.123	NA	10.8384226
568	1	7913029	7913029	A	G	exonic	UTS2	NA	nonsynonymous SNV	UTS2:NM_006786:exon1:c.T35C:p.I12T	exonic	ENSG00000049247	NA	nonsynonymous SNV	ENSG00000049247:ENST00000361696:exon1:c.T35C:p.I12T,ENSG00000049247:ENST00000377516:exon2:c.T35C:p.I12T	NA	NA	1p36.23	NA	Name=GATA2_(CG2-96)	Name=11	NA	rs34305100	0.11	0.11	0.078	0.0830671	0.1839	0.0357	0.0994	0.0635	0.0429	0.18	0.03	0.12	0.06	0.1355	0.18	0.17	T	0.091	B	0.039	B	0.061	N	1.000	P	1.15	L	1.15	T	-1.065	T	0.000	T	0.081	1.517	11.02	2.83	0.370	1.875	4.342	1.517424	1.517424	0.08	0.177442	0.074898	NA	0.101	NA	10.8364914
568	15	42643529	42643529	T	C	exonic	GANC	NA	nonsynonymous SNV	GANC:NM_198141:exon23:c.T2534C:p.F845S	exonic	ENSG00000214013	NA	nonsynonymous SNV	ENSG00000214013:ENST00000566690:exon5:c.T161C:p.F54S,ENSG00000214013:ENST00000567596:exon5:c.T161C:p.F54S,ENSG00000214013:ENST00000318010:exon23:c.T2534C:p.F845S	Score=346;Name=lod=34	NA	15q15.1	NA	NA	NA	NA	rs7181742	0.28	0.28	0.297	0.378395	0.1332	0.1577	0.3847	0.7405	0.364	0.12	0.13	0.33	0.68	0.2251	0.68	1	T	0.0	B	0.0	B	0.027	N	0.000	P	-1.585	N	-2.03	D	-0.925	T	0.000	T	0.454	1.363	10.48	3.48	0.677	2.048	4.157	1.362931	1.362931	1	0.138986	0.627099	NA	0.319	NA	10.8360474
568	22	42537271	42537271	T	C	ncRNA_exonic	CYP2D7P1	NA	NA	NA	exonic	ENSG00000205702	NA	nonsynonymous SNV	ENSG00000205702:ENST00000435101:exon3:c.A26G:p.Y9C	NA	NA	22q13.2	NA	NA	NA	NA	rs28510588	0.24	0.24	0.17	0.261981	0.3131	0.2669	0.3617	0.025	0.454	0.3	0.27	0.36	0.03	0.3516	0.36	0	D	1.0	D	0.992	D	0.272	N	0.999	P	.	.	-1.0	T	-0.743	T	0.000	T	.	2.469	14.22	-6.81	-1.750	0.132	15.808	2.468957	2.468957	0	NA	NA	NA	0.13	NA	10.8353
569	11	48347124	48347124	A	G	exonic	OR4C3	NA	nonsynonymous SNV	OR4C3:NM_001004702:exon1:c.A632G:p.E211G	exonic	ENSG00000176547	NA	nonsynonymous SNV	ENSG00000176547:ENST00000319856:exon1:c.A632G:p.E211G	Score=378;Name=lod=46	NA	11p11.2	NA	NA	NA	NA	rs79019124	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4993	0.3	0.07	T	0.0	B	0.001	B	0.002	N	0.954	N	1.6	L	8.62	T	-1.005	T	0.001	T	0.4	2.266	13.54	4.65	1.046	1.362	10.016	2.266344	2.266344	0.05	NA	NA	NA	0.268	NA	10.8340334
569	4	38933859	38933859	G	A	exonic	FAM114A1	NA	nonsynonymous SNV	FAM114A1:NM_138389:exon12:c.G1327A:p.V443I	exonic	ENSG00000197712	NA	nonsynonymous SNV	ENSG00000197712:ENST00000515037:exon10:c.G706A:p.V236I,ENSG00000197712:ENST00000358869:exon12:c.G1327A:p.V443I	Score=534;Name=lod=198	NA	4p14	NA	NA	NA	NA	rs17429619	0.13	0.13	0.111	0.108826	0.1551	0.0764	0.2046	0.0507	0.1053	0.17	0.08	0.2	0.07	0.1652	0.2	1	T	0.012	B	0.007	B	0.002	N	0.004	P	0.63	N	3.05	T	-0.982	T	0.000	T	0.032	-0.784	0.718	4.38	1.435	1.397	3.702	-0.784474	NA	0.86	0.17907	0.078075	NA	0.036	NA	10.8339634
569	1	24417415	24417415	T	C	exonic	MYOM3	NA	nonsynonymous SNV	MYOM3:NM_152372:exon12:c.A1304G:p.Q435R	exonic	ENSG00000142661	NA	nonsynonymous SNV	ENSG00000142661:ENST00000329601:exon12:c.A1304G:p.Q435R,ENSG00000142661:ENST00000330966:exon12:c.A1307G:p.Q436R,ENSG00000142661:ENST00000374434:exon12:c.A1304G:p.Q435R	Score=358;Name=lod=38	NA	1p36.11	NA	NA	NA	NA	rs6700245	0.12	0.12	0.121	0.169529	0.1759	0.003	0.1311	0.239	0.2679	0.15	0.0035	0.16	0.18	0.1634	0.2	0.61	T	0.003	B	0.021	B	0.074	N	0.000	P	0.27	N	0.44	T	-1.052	T	0.000	T	0.042	1.752	11.82	3.03	2.007	1.310	3.636	1.751658	1.751658	0.11	0.160458	0.197776	NA	0.159	NA	10.8335754
569	1	144865850	144865850	G	T	exonic	PDE4DIP	NA	nonsynonymous SNV	PDE4DIP:NM_001198834:exon35:c.C5730A:p.D1910E,PDE4DIP:NM_014644:exon35:c.C5730A:p.D1910E,PDE4DIP:NM_001198832:exon37:c.C5412A:p.D1804E	exonic	ENSG00000178104	NA	nonsynonymous SNV	ENSG00000178104:ENST00000369354:exon35:c.C5730A:p.D1910E,ENSG00000178104:ENST00000369356:exon35:c.C5730A:p.D1910E,ENSG00000178104:ENST00000313382:exon37:c.C5412A:p.D1804E,ENSG00000178104:ENST00000530740:exon37:c.C5985A:p.D1995E,ENSG00000178104:ENST00000369359:exon38:c.C6138A:p.D2046E	Score=448;Name=lod=88	NA	1q21.1	NA	NA	Name=20	NA	rs1613780	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	1	T	0.0	B	0.0	B	.	.	1.000	D	-2.045	N	5.35	T	-0.963	T	0.007	T	0.209	-0.992	0.272	3.3	0.078	0.393	4.602	-0.992159	NA	1	NA	NA	NA	0.5	NA	10.8333334
569	1	144886197	144886197	A	T	exonic	PDE4DIP	NA	nonsynonymous SNV	PDE4DIP:NM_001198834:exon23:c.T3037A:p.F1013I,PDE4DIP:NM_014644:exon23:c.T3037A:p.F1013I,PDE4DIP:NM_001198832:exon26:c.T3235A:p.F1079I	exonic	ENSG00000178104	NA	nonsynonymous SNV	ENSG00000178104:ENST00000369354:exon23:c.T3037A:p.F1013I,ENSG00000178104:ENST00000369356:exon23:c.T3037A:p.F1013I,ENSG00000178104:ENST00000313382:exon26:c.T3235A:p.F1079I,ENSG00000178104:ENST00000369359:exon26:c.T3448A:p.F1150I,ENSG00000178104:ENST00000530740:exon26:c.T3448A:p.F1150I	Score=518;Name=lod=170	NA	1q21.1	NA	Name=PU.1	NA	NA	rs1698624	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	0.55	T	0.0	B	0.0	B	.	.	0.972	D	-0.345	N	5.01	T	-1.018	T	0.001	T	0.29	-1.049	0.196	-2.45	-0.810	-0.328	2.677	-1.049274	NA	1	NA	NA	NA	0.5	NA	10.8333334
569	11	48346916	48346916	G	C	exonic	OR4C3	NA	nonsynonymous SNV	OR4C3:NM_001004702:exon1:c.G424C:p.V142L	exonic	ENSG00000176547	NA	nonsynonymous SNV	ENSG00000176547:ENST00000319856:exon1:c.G424C:p.V142L	NA	NA	11p11.2	Score=740;Name=V$PPARG_01	NA	NA	NA	rs77069283	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	0.24	0.18	T	0.001	B	0.012	B	0.006	N	1.000	N	1.525	L	3.49	T	-1.033	T	0.020	T	0.663	1.913	12.35	4.87	1.493	1.564	12.531	1.912807	1.912807	0.15	NA	NA	ID=COSM1180649;OCCURENCE=1(upper_aerodigestive_tract)	0.225	NA	10.8333334
569	13	98829175	98829175	C	G	exonic	RNF113B	NA	nonsynonymous SNV	RNF113B:NM_178861:exon1:c.G316C:p.E106Q	exonic	ENSG00000139797	NA	nonsynonymous SNV	ENSG00000139797:ENST00000267291:exon1:c.G316C:p.E106Q	Score=702;Name=lod=953	NA	13q32.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.71	T	0.804	P	0.446	B	0.002	U	1.000	N	1.045	L	1.49	T	-1.027	T	0.050	T	0.074	2.047	12.8	1.16	0.936	4.951	8.184	2.046654	2.046654	0.65	NA	NA	NA	NA	NA	10.8333334
569	8	53586706	53586706	A	G	exonic	RB1CC1	NA	nonsynonymous SNV	RB1CC1:NM_001083617:exon7:c.T701C:p.M234T,RB1CC1:NM_014781:exon7:c.T701C:p.M234T	exonic	ENSG00000023287	NA	nonsynonymous SNV	ENSG00000023287:ENST00000539297:exon5:c.T701C:p.M234T,ENSG00000023287:ENST00000025008:exon7:c.T701C:p.M234T,ENSG00000023287:ENST00000435644:exon7:c.T701C:p.M234T	Score=671;Name=lod=714	NA	8q11.23	Score=872;Name=V$EVI1_04	NA	NA	NA	rs17337252	0.55	0.55	0.5	0.502995	0.5	0.8393	0.6095	0.2088	0.4816	0.51	0.84	0.59	0.23	0.511	0.84	0.67	T	0.0	B	0.0	B	0.310	N	0.963	P	-0.69	N	2.63	T	-1.034	T	0.000	T	0.136	1.013	9.138	2.99	0.976	2.354	3.679	1.013096	NA	0.56	0.489651	0.254653	NA	0.587	NA	10.8326824
569	7	100608370	100608370	A	C	intergenic	ACHE,MUC12	dist=114829;dist=4534	NA	NA	exonic	ENSG00000169894	NA	nonsynonymous SNV	ENSG00000169894:ENST00000422757:exon5:c.A575C:p.E192A,ENSG00000169894:ENST00000319509:exon6:c.A2105C:p.E702A	Score=272;Name=lod=17	NA	7q22.1	NA	NA	Name=2	NA	rs73714276	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5007	0.41	0.32	T	0.675	P	0.294	B	.	.	0.974	N	1.4	L	3.08	T	-1.058	T	0.027	T	0.277	2.806	15.34	2.09	1.200	1.884	6.166	2.806029	2.806029	0.07	NA	NA	ID=COSM1599879,COSM1599880;OCCURENCE=1(central_nervous_system)	0.406	NA	10.8326334
569	7	142637601	142637601	T	C	exonic	C7orf34	NA	nonsynonymous SNV	C7orf34:NM_178829:exon2:c.T371C:p.V124A	exonic	ENSG00000165131	NA	nonsynonymous SNV	ENSG00000165131:ENST00000409607:exon2:c.T371C:p.V124A	NA	NA	7q34	NA	NA	NA	NA	rs148010864	0.0009	0.0009	NA	0.000798722	NA	NA	0.0029	0.0015	NA	NA	NA	0.0028	0.002	0.0005	0.0028	0.01	D	0.597	P	0.199	B	0.003	N	1.000	N	0.69	N	.	.	-1.054	T	0.053	T	0.503	1.655	11.49	3.33	0.846	2.330	7.163	1.65483	1.65483	0.03	0.000698	0.000227	NA	NA	NA	10.8321354
569	2	73315604	73315604	C	T	exonic	RAB11FIP5	NA	nonsynonymous SNV	RAB11FIP5:NM_015470:exon3:c.G1142A:p.R381H	exonic	ENSG00000135631	NA	nonsynonymous SNV	ENSG00000135631:ENST00000258098:exon3:c.G1142A:p.R381H	NA	NA	2p13.2	NA	NA	NA	NA	rs199517071	0.0009	0.0009	NA	0.000399361	0.002	NA	NA	NA	NA	0.0026	NA	NA	NA	0.00008307	0.0026	0.34	T	0.998	D	0.747	P	0.258	N	1.000	N	1.61	L	0.91	T	-1.032	T	0.126	T	0.351	2.298	13.64	3.28	1.074	0.087	5.835	2.298396	2.298396	0.58	NA	NA	NA	NA	NA	10.8312503
569	12	121593936	121593936	C	T	exonic	P2RX7	NA	nonsynonymous SNV	P2RX7:NM_002562:exon3:c.C349T:p.R117W	exonic	ENSG00000089041	NA	nonsynonymous SNV	ENSG00000089041:ENST00000261826:exon3:c.C349T:p.R117W,ENSG00000089041:ENST00000377162:exon3:c.C349T:p.R117W,ENSG00000089041:ENST00000535600:exon3:c.C349T:p.R117W,ENSG00000089041:ENST00000541022:exon3:c.C349T:p.R117W,ENSG00000089041:ENST00000541564:exon3:c.C349T:p.R117W,ENSG00000089041:ENST00000541716:exon3:c.C349T:p.R117W,ENSG00000089041:ENST00000546057:exon3:c.C349T:p.R117W,ENSG00000089041:ENST00000535250:exon4:c.C79T:p.R27W	NA	NA	12q24.31	NA	NA	Name=3	NA	rs28360445	0.0018	0.0018	NA	0.000998403	0.002	NA	0.0043	NA	NA	0.0013	NA	0.01	NA	0.0013	0.01	0	D	0.976	D	0.657	P	0.544	N	1.000	N	0	N	3.64	T	-0.944	T	0.008	T	0.426	1.1	9.489	-1.17	-0.427	-0.106	5.973	1.100292	NA	0	0.001977	0.000454	NA	NA	NA	10.8280564
569	2	96993757	96993757	C	T	exonic	ITPRIPL1	NA	nonsynonymous SNV	ITPRIPL1:NM_178495:exon1:c.C1412T:p.T471M,ITPRIPL1:NM_001163523:exon2:c.C1364T:p.T455M,ITPRIPL1:NM_001163524:exon2:c.C1364T:p.T455M,ITPRIPL1:NM_001008949:exon3:c.C1388T:p.T463M	exonic	ENSG00000198885	NA	nonsynonymous SNV	ENSG00000198885:ENST00000361124:exon1:c.C1412T:p.T471M,ENSG00000198885:ENST00000536814:exon2:c.C1364T:p.T455M,ENSG00000198885:ENST00000542887:exon2:c.C1364T:p.T455M,ENSG00000198885:ENST00000439118:exon3:c.C1388T:p.T463M	NA	NA	2q11.2	NA	NA	NA	NA	rs2279105	0.27	0.27	0.293	0.360623	0.3191	0.2312	0.3141	0.2421	0.7301	0.32	0.21	0.31	0.22	0.351	0.34	0.12	T	0.998	D	0.664	P	0.045	N	1.000	P	0.205	N	3.11	T	-0.727	T	0.000	T	0.399	2.276	13.57	5.5	2.861	2.765	18.332	2.275854	2.275854	0.02	0.335233	0.249433	NA	0.196	NA	10.8280004
569	5	171765882	171765882	C	T	exonic	SH3PXD2B	NA	nonsynonymous SNV	SH3PXD2B:NM_001017995:exon13:c.G2227A:p.V743M	exonic	ENSG00000174705	NA	nonsynonymous SNV	ENSG00000174705:ENST00000311601:exon13:c.G2227A:p.V743M	NA	NA	5q35.1	Score=714;Name=V$P53_01	NA	NA	NA	rs141103005	0.0009	0.0009	NA	0.00239617	0.003	NA	NA	NA	0.0092	0.0026	NA	NA	NA	0.0013	0.0026	.	.	0.53	P	0.059	B	0.052	N	1.000	N	0.695	N	0.13	T	-1.055	T	0.083	T	0.026	-0.597	1.33	-4.75	-0.916	1.183	1.810	-0.59705	NA	0.06	0.001279	0.000454	NA	0.043	NA	10.8277544
569	5	67588148	67588148	G	A	exonic	PIK3R1	NA	nonsynonymous SNV	PIK3R1:NM_181504:exon2:c.G168A:p.M56I,PIK3R1:NM_181524:exon2:c.G78A:p.M26I,PIK3R1:NM_181523:exon8:c.G978A:p.M326I	exonic	ENSG00000145675	NA	nonsynonymous SNV	ENSG00000145675:ENST00000320694:exon2:c.G78A:p.M26I,ENSG00000145675:ENST00000336483:exon2:c.G168A:p.M56I,ENSG00000145675:ENST00000522084:exon3:c.G168A:p.M56I,ENSG00000145675:ENST00000523807:exon4:c.G168A:p.M56I,ENSG00000145675:ENST00000274335:exon7:c.G978A:p.M326I,ENSG00000145675:ENST00000396611:exon7:c.G978A:p.M326I,ENSG00000145675:ENST00000521381:exon8:c.G978A:p.M326I,ENSG00000145675:ENST00000521657:exon8:c.G978A:p.M326I	Score=634;Name=lod=503	NA	5q13.1	NA	NA	NA	NA	rs3730089	0.22	0.22	0.199	0.220447	0.167	0.1657	0.2133	0.416	0.0726	0.16	0.16	0.21	0.38	0.1742	0.38	0.28	T	0.0	B	0.0	B	0.000	N	0.000	P	1.32	L	1.99	T	-1.011	T	0.000	T	0.218	1.519	11.03	4.25	1.498	4.509	15.363	1.519262	1.519262	0.51	0.164535	0.382206	NA	0.188	NA	10.8275984
569	19	5783515	5783515	G	A	exonic	PRR22	NA	nonsynonymous SNV	PRR22:NM_001134316:exon3:c.C743T:p.P248L	exonic	ENSG00000212123	NA	nonsynonymous SNV	ENSG00000212123:ENST00000419421:exon3:c.C743T:p.P248L	NA	NA	19p13.3	NA	Name=Pol2,Pol2-4H8	NA	NA	rs34572934	0.0014	0.0014	0.002	0.000998403	0.003	NA	0.0029	NA	NA	0.0026	NA	0.0028	NA	0.0016	0.0028	0.17	T	0.999	D	0.889	P	.	.	1.000	N	0.975	L	-0.04	T	-0.890	T	0.246	T	0.213	2.499	14.32	2.36	0.717	0.436	7.774	2.4991	2.4991	0.02	0.002461	0.002537	NA	0.036	NA	10.8262724
569	2	71360431	71360431	G	A	exonic	MPHOSPH10	NA	nonsynonymous SNV	MPHOSPH10:NM_005791:exon2:c.G493A:p.V165I	exonic	ENSG00000124383	NA	nonsynonymous SNV	ENSG00000124383:ENST00000244230:exon2:c.G493A:p.V165I,ENSG00000124383:ENST00000498451:exon2:c.G493A:p.V165I	NA	NA	2p13.3	NA	NA	NA	NA	rs150757204	0.0009	0.0009	NA	0.000998403	0.003	NA	0.0029	NA	NA	0.0013	NA	0.0028	NA	0.0017	0.0031	0.18	T	0.753	P	0.195	B	0.622	N	1.000	N	1.355	L	2.93	T	-1.042	T	0.028	T	0.017	1.763	11.85	4.16	2.528	1.821	10.848	1.762625	1.762625	0.27	0.00314	0.000227	NA	NA	NA	10.8254934
569	1	156641746	156641746	C	G	exonic	NES	NA	nonsynonymous SNV	NES:NM_006617:exon4:c.G2234C:p.R745T	exonic	ENSG00000132688	NA	nonsynonymous SNV	ENSG00000132688:ENST00000368223:exon4:c.G2234C:p.R745T	NA	NA	1q23.1	NA	NA	NA	NA	rs140652000	0.0005	0.0005	NA	0.000199681	0.001	NA	NA	NA	NA	0.0013	NA	NA	NA	0.0032	0.0041	0	D	0.915	P	0.321	B	.	.	1.000	N	1.525	L	-2.27	D	-0.647	T	0.294	T	0.094	2.044	12.79	-3.54	-0.414	-0.784	7.417	2.043651	2.043651	0	0.00407	0	NA	NA	NA	10.8250634
570	5	121413208	121413208	C	T	exonic	LOX	NA	nonsynonymous SNV	LOX:NM_002317:exon1:c.G473A:p.R158Q	exonic	ENSG00000113083	NA	nonsynonymous SNV	ENSG00000113083:ENST00000231004:exon1:c.G473A:p.R158Q	Score=617;Name=lod=428	NA	5q23.2	Score=927;Name=V$ZIC1_01	NA	NA	NA	rs1800449	0.17	0.17	0.151	0.156749	0.162	0.1875	0.1599	0.1437	0.135	0.15	0.2	0.17	0.15	0.1728	0.2	0.73	T	0.0	B	0.0	B	0.218	N	1.000	P	1.5	L	1.97	T	-0.976	T	0.000	T	0.143	-0.27	2.703	2.41	-0.042	-0.034	9.841	-0.270433	NA	0.42	0.173761	0.178425	ID=COSM448489;OCCURENCE=1(breast)	0.13	CLINSIG=non-pathogenic;CLNDBN=LYSYL_OXIDASE_POLYMORPHISM;CLNREVSTAT=single;CLNACC=RCV000015437.1;CLNDSDB=.;CLNDSDBID=.	10.8247724
570	4	75695301	75695301	G	A	exonic	BTC	NA	nonsynonymous SNV	BTC:NM_001729:exon2:c.C130T:p.L44F	exonic	ENSG00000174808	NA	nonsynonymous SNV	ENSG00000174808:ENST00000395743:exon2:c.C130T:p.L44F	NA	NA	4q13.3	NA	NA	NA	NA	rs56320257	0.03	0.03	0.026	0.0285543	NA	NA	0.0115	0.1021	NA	NA	NA	0.01	0.11	0.0092	0.11	0.3	T	0.986	D	0.744	P	0.023	N	1.000	N	1.355	L	2.81	T	-1.036	T	0.001	T	0.154	2.144	13.13	2.27	0.640	1.497	5.981	2.144133	2.144133	0.07	0.000814	0.102133	NA	0.051	NA	10.8233194
570	12	7945640	7945640	G	T	exonic	NANOG	NA	nonsynonymous SNV	NANOG:NM_024865:exon2:c.G246T:p.K82N	exonic	ENSG00000111704	NA	nonsynonymous SNV	ENSG00000111704:ENST00000229307:exon2:c.G246T:p.K82N,ENSG00000111704:ENST00000526286:exon2:c.G246T:p.K82N,ENSG00000111704:ENST00000541267:exon4:c.G174T:p.K58N	NA	NA	12p13.31	NA	NA	NA	NA	rs2889551	0.33	0.33	0.306	NA	NA	NA	NA	NA	NA	0.52	0.04	0.48	0.27	0.5104	0.52	0.48	T	0.0	B	0.001	B	0.031	N	1.000	P	-0.345	N	-2.89	D	-1.054	T	0.000	T	0.07	0.426	6.311	-8.46	-2.317	-2.719	8.235	0.425557	NA	0.25	NA	NA	NA	0.442	NA	10.8229334
570	15	64970496	64970496	C	T	exonic	ZNF609	NA	nonsynonymous SNV	ZNF609:NM_015042:exon5:c.C3584T:p.T1195M	exonic	ENSG00000180357	NA	nonsynonymous SNV	ENSG00000180357:ENST00000326648:exon5:c.C3584T:p.T1195M	NA	NA	15q22.31	NA	NA	NA	NA	rs146522359	0.0009	0.0009	NA	0.00139776	0.004	NA	0.0029	0.0008	NA	0.0026	NA	NA	NA	0.0022	0.011	0.08	T	0.567	P	0.092	B	0.311	N	1.000	N	0.345	N	0.94	T	-1.039	T	0.062	T	0.108	1.999	12.64	5.62	2.640	2.921	12.937	1.999185	1.999185	0.02	0.004652	0.001362	NA	0.007	NA	10.8224814
570	6	29912333	29912333	C	T	exonic	HLA-A	NA	nonsynonymous SNV	HLA-A:NM_001242758:exon5:c.C952T:p.L318F,HLA-A:NM_002116:exon5:c.C952T:p.L318F	exonic	ENSG00000206503	NA	nonsynonymous SNV	ENSG00000206503:ENST00000376806:exon5:c.C952T:p.L318F,ENSG00000206503:ENST00000376809:exon5:c.C952T:p.L318F,ENSG00000206503:ENST00000396634:exon7:c.C952T:p.L318F	NA	NA	6p22.1	NA	Name=Pol2-4H8,Pol2	NA	NA	rs3179982	0.53	0.53	0.511	0.535343	0.5229	0.4881	0.6023	0.6044	0.456	0.51	0.48	0.54	0.62	0.5252	0.62	0	D	0.998	D	0.995	D	0.189	U	1.000	P	.	.	5.49	T	-0.913	T	0.004	T	0.174	-0.025	3.888	-0.987	-0.224	-2.297	6.412	-0.024559	NA	0.32	0.464747	0.524188	NA	0.232	NA	10.8204864
570	11	60777073	60777073	G	A	exonic	CD6	NA	nonsynonymous SNV	CD6:NM_001254750:exon5:c.G811A:p.A271T,CD6:NM_001254751:exon5:c.G811A:p.A271T,CD6:NM_006725:exon5:c.G811A:p.A271T	exonic	ENSG00000013725	NA	nonsynonymous SNV	ENSG00000013725:ENST00000313421:exon5:c.G811A:p.A271T,ENSG00000013725:ENST00000344028:exon5:c.G811A:p.A271T,ENSG00000013725:ENST00000344931:exon5:c.G811A:p.A271T,ENSG00000013725:ENST00000346437:exon5:c.G811A:p.A271T,ENSG00000013725:ENST00000352009:exon5:c.G811A:p.A271T,ENSG00000013725:ENST00000452451:exon5:c.G811A:p.A271T	NA	NA	11q12.2	NA	Name=CTCF,CTCF_(SC-5916)	NA	NA	rs12360861	0.1	0.1	0.076	0.0766773	0.1938	0.001	0.121	0.0401	0.0521	0.2	0.0017	0.14	0.04	0.1385	0.2	0.61	T	0.069	B	0.013	B	0.143	N	1.000	P	0.12	N	1.34	T	-1.095	T	0.000	T	0.013	-0.547	1.521	-9.81	-2.169	-7.571	5.943	-0.546883	NA	0.56	0.18167	0.060599	ID=COSM1561314,COSM1561313;OCCURENCE=1(large_intestine)	0.174	NA	10.8193634
570	2	29226512	29226512	A	G	exonic	FAM179A	NA	nonsynonymous SNV	FAM179A:NM_199280:exon6:c.A794G:p.Q265R	exonic	ENSG00000189350	NA	nonsynonymous SNV	ENSG00000189350:ENST00000379558:exon6:c.A794G:p.Q265R,ENSG00000189350:ENST00000403861:exon6:c.A794G:p.Q265R	Score=289;Name=lod=20	NA	2p23.2	NA	NA	NA	NA	rs12623297	0.78	0.78	0.771	0.744808	0.839	0.8274	0.8098	0.5998	0.7127	0.82	0.81	0.81	0.64	0.8124	0.86	0.11	T	0.999	D	0.994	D	.	.	0.973	P	1.04	L	2.43	T	-1.159	T	0.000	T	0.188	2.674	14.9	5.16	1.950	4.415	11.387	2.673574	2.673574	0.09	0.863735	0.657252	NA	0.855	NA	10.8181984
570	1	152281948	152281948	G	A	exonic	FLG	NA	nonsynonymous SNV	FLG:NM_002016:exon3:c.C5414T:p.A1805V	exonic	ENSG00000143631	NA	nonsynonymous SNV	ENSG00000143631:ENST00000368799:exon3:c.C5414T:p.A1805V	NA	NA	1q21.3	NA	NA	NA	NA	rs12405241	0.26	0.26	0.183	0.28754	0.1421	0.5843	0.3905	0.0113	0.4315	0.15	0.59	0.33	0.02	0.2288	0.59	0.35	T	0.999	D	0.959	D	.	.	1.000	P	1.555	L	4.62	T	-0.975	T	0.004	T	0.016	1.13	9.606	-3.56	-0.903	-5.623	0.762	1.13007	NA	0.6	0.144253	0.036541	NA	0.087	NA	10.8181804
570	5	13894894	13894894	T	A	exonic	DNAH5	NA	nonsynonymous SNV	DNAH5:NM_001369:exon16:c.A2296T:p.I766L	exonic	ENSG00000039139	NA	nonsynonymous SNV	ENSG00000039139:ENST00000265104:exon16:c.A2296T:p.I766L	Score=511;Name=lod=159	NA	5p15.2	NA	NA	NA	NA	rs4701997	0.44	0.44	0.417	0.487819	0.5	0.249	0.4654	0.5681	0.6288	0.49	0.24	0.48	0.57	0.5073	0.57	0.59	T	0.001	B	0.032	B	0.000	D	0.200	P	1.975	M	0.83	T	-0.929	T	0.000	T	0.101	1.635	11.42	4.37	0.935	3.012	8.531	1.634972	1.634972	0.31	0.507907	0.533137	ID=COSM149798;OCCURENCE=1(stomach)	0.457	NA	10.8181264
570	17	39579112	39579112	G	A	exonic	KRT37	NA	nonsynonymous SNV	KRT37:NM_003770:exon3:c.C650T:p.A217V	exonic	ENSG00000108417	NA	nonsynonymous SNV	ENSG00000108417:ENST00000225550:exon3:c.C650T:p.A217V	Score=317;Name=lod=26	NA	17q21.2	NA	NA	NA	NA	rs16966811	0.18	0.18	0.155	0.173323	0.1759	0.3224	0.1268	0.0378	0.2331	0.18	0.31	0.13	0.05	0.1638	0.31	0.01	D	0.003	B	0.003	B	0.390	N	1.000	P	1.11	L	-2.6	D	-1.055	T	0.000	T	0.076	1.493	10.94	1.39	0.233	2.537	8.168	1.492672	1.492672	0.01	0.176977	0.057876	NA	0.109	NA	10.8166564
570	20	31757078	31757078	G	A	exonic	BPIFA2	NA	nonsynonymous SNV	BPIFA2:NM_080574:exon2:c.G127A:p.G43R	exonic	ENSG00000131050	NA	nonsynonymous SNV	ENSG00000131050:ENST00000253362:exon2:c.G127A:p.G43R,ENSG00000131050:ENST00000354932:exon2:c.G127A:p.G43R	NA	NA	20q11.21	NA	Name=CTCF,CTCF_(SC-5916)	Name=20	NA	rs6059139	0.03	0.03	0.036	0.028155	0.005	NA	0.0058	0.0998	NA	0.01	NA	0.01	0.11	0.01	0.11	0.08	T	0.532	P	0.236	B	0.500	N	1.000	P	1.3	L	2.62	T	-1.029	T	0.001	T	0.102	-0.212	2.971	2.22	0.707	0.736	6.387	-0.212453	NA	0	0.001977	0.092601	NA	0.029	NA	10.8163564
570	5	135388663	135388663	A	G	exonic	TGFBI	NA	synonymous SNV	TGFBI:NM_000358:exon8:c.A981G:p.V327V	exonic	ENSG00000120708	NA	synonymous SNV	ENSG00000120708:ENST00000604555:exon3:c.A213G:p.V71V,ENSG00000120708:ENST00000305126:exon8:c.A981G:p.V327V,ENSG00000120708:ENST00000442011:exon8:c.A981G:p.V327V	Score=481;Name=lod=120	NA	5q31.1	NA	Name=Pol2	NA	NA	rs1054124	0.36	0.36	0.365	0.387181	0.2594	0.3433	0.3631	0.5446	0.3681	0.27	0.34	0.34	0.53	0.3213	0.53	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.902	T	0.000	T	.	0.313	5.696	5.65	1.532	5.704	15.162	0.31293	NA	NA	0.270146	0.495769	NA	0.341	NA	10.8158206
571	19	35435006	35435006	G	A	exonic	ZNF30	NA	nonsynonymous SNV	ZNF30:NM_001099437:exon5:c.G1139A:p.R380K,ZNF30:NM_001099438:exon5:c.G1139A:p.R380K,ZNF30:NM_194325:exon5:c.G1136A:p.R379K	exonic	ENSG00000168661	NA	nonsynonymous SNV	ENSG00000168661:ENST00000303586:exon5:c.G1139A:p.R380K,ENSG00000168661:ENST00000439785:exon5:c.G1139A:p.R380K,ENSG00000168661:ENST00000601142:exon5:c.G1136A:p.R379K,ENSG00000168661:ENST00000426813:exon6:c.G893A:p.R298K	Score=304;Name=lod=23	NA	19q13.11	NA	Name=ZNF274,SETDB1	Name=5	NA	rs1345658	0.63	0.63	0.662	0.652356	0.5129	0.6002	0.4049	0.9402	0.636	0.51	0.63	0.47	0.94	0.5334	0.94	1	T	0.0	B	0.0	B	.	.	1.000	P	-1.205	N	2.89	T	-1.020	T	0.000	T	0.055	-0.793	0.695	2.07	0.080	2.619	5.384	-0.793153	NA	1	0.472784	0.853703	NA	0.645	NA	10.8142494
571	2	135745129	135745129	G	A	exonic	MAP3K19	NA	nonsynonymous SNV	MAP3K19:NM_025052:exon7:c.C1313T:p.T438I	exonic	ENSG00000176601	NA	nonsynonymous SNV	ENSG00000176601:ENST00000358371:exon5:c.C974T:p.T325I,ENSG00000176601:ENST00000375845:exon7:c.C1313T:p.T438I,ENSG00000176601:ENST00000392915:exon7:c.C1364T:p.T455I	NA	NA	2q21.3	NA	NA	NA	NA	rs16831235	0.15	0.15	0.141	0.132388	0.2028	0.122	0.2262	0.0424	0.1258	0.2	0.14	0.21	0.04	0.1567	0.21	0	D	0.942	P	0.504	P	0.059	N	0.962	P	1.32	L	1.84	T	-1.094	T	0.000	T	0.106	3.689	18.74	2.11	0.663	2.295	8.471	3.689257	3.689257	0	0.163721	0.064231	NA	0.094	NA	10.8101124
571	3	47452676	47452676	G	A	exonic	PTPN23	NA	nonsynonymous SNV	PTPN23:NM_015466:exon20:c.G3388A:p.G1130S	exonic	ENSG00000076201	NA	nonsynonymous SNV	ENSG00000076201:ENST00000431726:exon19:c.G3010A:p.G1004S,ENSG00000076201:ENST00000265562:exon20:c.G3388A:p.G1130S	NA	NA	3p21.31	Score=866;Name=V$YY1_01	NA	NA	NA	rs138329311	0.01	0.01	0.005	0.00359425	0.0099	NA	0.0086	0.0008	0.001	0.01	NA	0.01	0.002	0.0078	0.01	0.54	T	0.909	P	0.128	B	0.000	N	1.000	N	0.345	N	3.92	T	-0.855	T	0.004	T	0.193	1.034	9.224	2.36	0.611	2.827	8.304	1.03403	NA	0.47	0.009848	0.00117	NA	NA	NA	10.8057854
572	14	69795199	69795199	G	A	exonic	GALNT16	NA	nonsynonymous SNV	GALNT16:NM_001168368:exon6:c.G601A:p.V201M,GALNT16:NM_020692:exon6:c.G601A:p.V201M	exonic	ENSG00000100626	NA	nonsynonymous SNV	ENSG00000100626:ENST00000337827:exon6:c.G601A:p.V201M,ENSG00000100626:ENST00000448469:exon6:c.G601A:p.V201M,ENSG00000100626:ENST00000553471:exon6:c.G601A:p.V201M,ENSG00000100626:ENST00000553669:exon6:c.G601A:p.V201M	Score=343;Name=lod=33	NA	14q24.1	NA	NA	NA	NA	rs12879377	0.2	0.2	0.19	0.175519	0.3569	0.1329	0.2032	0.0658	0.1616	0.33	0.14	0.23	0.07	0.2937	0.38	0.24	T	0.476	P	0.039	B	0.018	N	0.144	P	1.64	L	0.12	T	-0.950	T	0.000	T	0.197	0.798	8.202	4.49	1.272	2.850	6.000	0.798489	NA	0.15	0.381163	0.10168	NA	0.21	NA	10.8015704
572	6	130031215	130031215	T	C	exonic	ARHGAP18	NA	nonsynonymous SNV	ARHGAP18:NM_033515:exon1:c.A67G:p.T23A	exonic	ENSG00000146376	NA	nonsynonymous SNV	ENSG00000146376:ENST00000368149:exon1:c.A67G:p.T23A	Score=588;Name=lod=326	NA	6q22.33	Score=835;Name=V$PPARG_03	Name=HEY1,TBP,TAF1,Pol2,Sin3Ak-20,KAP1,ZNF263,Pol2-4H8	NA	NA	rs3752536	0.8	0.8	0.792	0.8127	0.835	0.7123	0.8199	0.8253	0.8712	0.85	0.72	0.82	0.8	0.8476	0.88	.	.	0.0	B	0.0	B	0.001	N	0.000	P	-0.345	N	.	.	-1.043	T	0.024	T	0.023	0.951	8.878	5.88	1.509	1.935	11.269	0.950939	NA	0.88	0.85093	0.8266	NA	0.906	NA	10.7998034
572	4	159601676	159601676	C	T	exonic	ETFDH	NA	nonsynonymous SNV	ETFDH:NM_004453:exon2:c.C92T:p.T31I	exonic	ENSG00000171503	NA	nonsynonymous SNV	ENSG00000171503:ENST00000511912:exon2:c.C92T:p.T31I	Score=409;Name=lod=61	NA	4q32.1	NA	NA	NA	NA	rs11559290	0.72	0.72	0.693	0.672724	0.8638	0.9732	0.7378	0.1452	0.8333	0.86	0.97	0.78	0.18	0.8119	0.97	0.47	T	0.0	B	0.005	B	0.015	N	0.000	P	0.69	N	-4.33	D	-0.906	T	0.000	T	0.079	1.513	11.01	5.63	2.818	1.121	8.929	1.513167	1.513167	0.31	0.859967	0.259646	NA	0.623	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000081080.1;CLNDSDB=.;CLNDSDBID=.	10.7976664
572	17	41223094	41223094	T	C	exonic	BRCA1	NA	nonsynonymous SNV	BRCA1:NM_007297:exon14:c.A4696G:p.S1566G,BRCA1:NM_007298:exon14:c.A1525G:p.S509G,BRCA1:NM_007294:exon15:c.A4837G:p.S1613G,BRCA1:NM_007299:exon15:c.A1525G:p.S509G,BRCA1:NM_007300:exon16:c.A4900G:p.S1634G	exonic	ENSG00000012048	NA	nonsynonymous SNV	ENSG00000012048:ENST00000591534:exon3:c.A310G:p.S104G,ENSG00000012048:ENST00000484087:exon9:c.A1150G:p.S384G,ENSG00000012048:ENST00000351666:exon11:c.A1288G:p.S430G,ENSG00000012048:ENST00000309486:exon14:c.A3949G:p.S1317G,ENSG00000012048:ENST00000352993:exon14:c.A1411G:p.S471G,ENSG00000012048:ENST00000493795:exon14:c.A4696G:p.S1566G,ENSG00000012048:ENST00000493919:exon14:c.A1387G:p.S463G,ENSG00000012048:ENST00000357654:exon15:c.A4837G:p.S1613G,ENSG00000012048:ENST00000468300:exon15:c.A1525G:p.S509G,ENSG00000012048:ENST00000478531:exon15:c.A1525G:p.S509G,ENSG00000012048:ENST00000491747:exon15:c.A1525G:p.S509G,ENSG00000012048:ENST00000471181:exon16:c.A4900G:p.S1634G	NA	NA	17q21.31	Score=876;Name=V$E47_02	NA	NA	NA	rs1799966	0.33	0.33	0.297	0.355831	0.3598	0.372	0.3746	0.2254	0.498	0.36	0.33	0.4	0.22	0.3496	0.4	0.05	D	0.459	P	0.115	B	0.372	N	1.000	P	1.04	L	-1.93	D	-1.080	T	0.000	T	0.454	1.652	11.48	1.5	0.128	-0.112	6.894	1.651916	1.651916	0.06	0.326628	0.242624	NA	0.268	CLINSIG=other|untested|probable-non-pathogenic;CLNDBN=Breast-ovarian_cancer\x2c_familial_1|Familial_cancer_of_breast|Neoplastic_Syndromes\x2c_Hereditary,not_provided|Familial_cancer_of_breast|Breast-ovarian_cancer\x2c_familial_1|BRCA1_and_BRCA2_Hereditary_Breast_and_Ovarian_Cancer|not_specified|Neoplastic_Syndromes\x2c_Hereditary;CLNREVSTAT=mult|not|single,mult|not|mult|single|not|single;CLNACC=RCV000031194.3|RCV000048673.2|RCV000130704.1,RCV000034753.2|RCV000048672.4|RCV000112410.2|RCV000119096.1|RCV000120260.1|RCV000128996.1;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet|GeneReviews:MedGen:OMIM:SNOMED_CT|MedGen,.|GeneReviews:MedGen:OMIM:SNOMED_CT|GeneReviews:MedGen:OMIM:Orphanet|GeneReviews:MedGen|.|MedGen;CLNDSDBID=NBK1247:C2676676:604370:ORPHA145|NBK1247:C0346153:114480:254843006|C0027672,.|NBK1247:C0346153:114480:254843006|NBK1247:C2676676:604370:ORPHA145|NBK1247:C0677776|.|C0027672	10.7973054
572	22	51117580	51117580	T	C	exonic	SHANK3	NA	nonsynonymous SNV	SHANK3:NM_033517:exon6:c.T734C:p.I245T	exonic	ENSG00000251322	NA	nonsynonymous SNV	ENSG00000251322:ENST00000262795:exon6:c.T734C:p.I245T,ENSG00000251322:ENST00000414786:exon6:c.T734C:p.I245T,ENSG00000251322:ENST00000445220:exon6:c.T734C:p.I245T	Score=649;Name=lod=577	NA	22q13.33	Score=725;Name=V$SEF1_C	NA	NA	NA	rs9616915	0.36	0.36	0.361	0.343251	0.5089	0.0754	0.353	0.4077	0.3548	0.51	0.1	0.39	0.4	0.5116	0.52	0.51	T	0.0	B	0.001	B	.	.	0.999	P	0.78	N	2.07	T	-0.935	T	0.000	T	0.102	1.282	10.19	4.65	1.190	1.469	6.717	1.281994	1.281994	0.26	0.517014	0.404448	ID=COSM445196;OCCURENCE=1(breast)	0.312	NA	10.7958194
572	3	9956279	9956279	G	A	exonic	IL17RE	NA	nonsynonymous SNV	IL17RE:NM_001193380:exon14:c.G1417A:p.G473R	exonic	ENSG00000163701	NA	nonsynonymous SNV	ENSG00000163701:ENST00000454190:exon14:c.G1417A:p.G473R	NA	NA	3p25.3	Score=949;Name=V$GATA1_01	NA	NA	NA	rs455863	0.37	0.37	0.377	0.362021	0.5447	0.0933	0.4625	0.4054	0.3211	0.54	0.07	0.46	0.39	0.4609	0.54	0	D	0.0	B	0.0	B	.	.	0.000	P	.	.	1.52	T	-0.993	T	0.000	T	.	-0.014	3.94	-9.87	-4.926	-5.110	6.235	-0.014333	NA	0	0.532442	0.415116	NA	0.254	NA	10.7952914
573	5	148747902	148747902	G	C	exonic	PCYOX1L	NA	nonsynonymous SNV	PCYOX1L:NM_024028:exon6:c.G1170C:p.E390D	exonic	ENSG00000145882	NA	nonsynonymous SNV	ENSG00000145882:ENST00000514349:exon5:c.G900C:p.E300D,ENSG00000145882:ENST00000274569:exon6:c.G1170C:p.E390D	Score=495;Name=lod=137	NA	5q32	NA	NA	NA	NA	rs4705336	0.1	0.1	0.069	0.0852636	0.1958	0.001	0.1499	0.0136	0.1094	0.2	NA	0.15	0.02	0.1533	0.2	0.55	T	0.999	D	0.994	D	0.000	D	0.000	P	1.3	L	2.48	T	-1.023	T	0.000	T	0.076	3.684	18.72	0.481	-0.223	0.648	5.324	3.684287	3.684287	0.18	0.190116	0.038811	ID=COSM149982;OCCURENCE=1(stomach)	0.058	NA	10.7941174
573	18	6977844	6977844	A	G	exonic	LAMA1	NA	nonsynonymous SNV	LAMA1:NM_005559:exon44:c.T6227C:p.I2076T	exonic	ENSG00000101680	NA	nonsynonymous SNV	ENSG00000101680:ENST00000389658:exon44:c.T6227C:p.I2076T	Score=555;Name=lod=240	NA	18p11.31	Score=838;Name=V$OCT1_02	NA	NA	NA	rs671871	0.25	0.25	0.278	0.273962	0.172	0.0893	0.2089	0.6309	0.1329	0.17	0.1	0.2	0.6	0.1947	0.6	0.53	T	0.0	B	0.0	B	0.181	N	1.000	P	-1.1	N	1.0	T	-0.943	T	0.000	T	0.049	0.291	5.574	2.15	0.209	1.200	5.082	0.290674	NA	NA	0.176977	0.544939	NA	0.312	NA	10.7896564
573	9	136029138	136029138	G	A	exonic	GBGT1	NA	synonymous SNV	GBGT1:NM_021996:exon7:c.C870T:p.G290G	exonic	ENSG00000148288	NA	nonsynonymous SNV	ENSG00000148288:ENST00000372043:exon7:c.C851T:p.A284V	Score=336;Name=lod=31	NA	9q34.2	NA	NA	NA	NA	rs35902535	0.05	0.05	0.062	0.0419329	0.0795	0.002	0.0403	0.0333	0.0573	0.09	0.0035	0.04	0.04	0.059	0.09	0	D	.	.	.	.	.	.	1.000	D	.	.	1.91	T	-1.173	T	0.004	T	.	2.022	12.72	2.31	0.542	0.761	5.091	2.02222	2.02222	NA	0.07186	0.045393	NA	0.029	NA	10.78964
573	1	152329435	152329435	C	T	exonic	FLG2	NA	nonsynonymous SNV	FLG2:NM_001014342:exon3:c.G827A:p.R276Q	exonic	ENSG00000143520	NA	nonsynonymous SNV	ENSG00000143520:ENST00000388718:exon3:c.G827A:p.R276Q	NA	NA	1q21.3	NA	NA	Name=3	NA	rs2282303	0.32	0.32	0.305	0.348243	0.1441	0.502	0.4164	0.3631	0.3313	0.15	0.5	0.36	0.34	0.2407	0.5	0.68	T	0.005	B	0.0	B	.	.	1.000	P	-0.49	N	5.81	T	-1.090	T	0.000	T	0.028	-1.684	0.012	3.44	1.051	1.178	7.919	-1.684393	NA	0.85	0.160233	0.325919	NA	0.29	NA	10.7883004
573	20	54941140	54941140	C	T	exonic	FAM210B	NA	nonsynonymous SNV	FAM210B:NM_080821:exon3:c.C376T:p.P126S	exonic	ENSG00000124098	NA	nonsynonymous SNV	ENSG00000124098:ENST00000371384:exon3:c.C376T:p.P126S	Score=401;Name=lod=57	NA	20q13.2	Score=989;Name=V$P53_02	Name=CTCF	NA	NA	rs6099115	0.21	0.21	0.207	0.229433	0.1938	0.001	0.1484	0.5499	0.1258	0.18	NA	0.16	0.54	0.1805	0.54	0.8	T	0.002	B	0.03	B	0.000	N	1.000	P	-0.09	N	1.64	T	-0.921	T	0.000	T	0.01	-0.616	1.259	3.28	0.373	0.723	4.021	-0.616284	NA	0.99	0.171163	0.492737	NA	0.232	NA	10.7878704
574	1	209785206	209785206	G	A	exonic	CAMK1G	NA	nonsynonymous SNV	CAMK1G:NM_020439:exon11:c.G985A:p.V329I	exonic	ENSG00000008118	NA	nonsynonymous SNV	ENSG00000008118:ENST00000009105:exon11:c.G985A:p.V329I,ENSG00000008118:ENST00000361322:exon11:c.G985A:p.V329I	NA	NA	1q32.2	Score=809;Name=V$PPARG_03	Name=CTCF,EBF1_(C-8),EBF	Name=10	NA	rs11119315	0.2	0.2	0.188	0.183107	0.1819	0.1062	0.1859	0.3064	0.0951	0.19	0.13	0.2	0.3	0.1876	0.3	0.19	T	0.008	B	0.006	B	0.110	N	1.000	P	0.205	N	-0.3	T	-1.076	T	0.000	T	0.055	1.555	11.15	-1.06	-0.529	-1.582	5.383	1.555376	1.555376	0.19	0.179186	0.291421	NA	0.196	NA	10.7846474
574	6	31238942	31238942	G	A	exonic	HLA-C	NA	nonsynonymous SNV	HLA-C:NM_001243042:exon3:c.C527T:p.A176V,HLA-C:NM_002117:exon3:c.C527T:p.A176V	exonic	ENSG00000204525	NA	nonsynonymous SNV	ENSG00000204525:ENST00000376228:exon3:c.C527T:p.A176V,ENSG00000204525:ENST00000383329:exon3:c.C527T:p.A176V	NA	NA	6p21.33	NA	Name=Pol2-4H8	NA	NA	rs2308590	0.56	0.56	NA	0.296725	0.2763	0.244	0.3098	0.3631	0.273	0.52	0.6	0.56	0.58	0.2731	0.6	0.35	T	0.001	B	0.005	B	0.000	N	1.000	N	-2.455	N	9.46	T	-0.887	T	0.000	T	0.505	-0.725	0.893	-5.62	-4.565	-15.955	2.384	-0.724867	NA	0.22	NA	NA	NA	NA	NA	10.7839334
574	1	75175886	75175886	T	C	exonic	CRYZ	NA	nonsynonymous SNV	CRYZ:NM_001134759:exon4:c.A115G:p.I39V,CRYZ:NM_001130043:exon6:c.A526G:p.I176V,CRYZ:NM_001889:exon6:c.A526G:p.I176V,CRYZ:NM_001130042:exon7:c.A526G:p.I176V	exonic	ENSG00000116791	NA	nonsynonymous SNV	ENSG00000116791:ENST00000370872:exon4:c.A115G:p.I39V,ENSG00000116791:ENST00000340866:exon6:c.A526G:p.I176V,ENSG00000116791:ENST00000370871:exon6:c.A526G:p.I176V,ENSG00000116791:ENST00000441120:exon6:c.A526G:p.I176V,ENSG00000116791:ENST00000370870:exon7:c.A526G:p.I176V,ENSG00000116791:ENST00000417775:exon7:c.A526G:p.I176V	Score=564;Name=lod=262	NA	1p31.1	NA	NA	NA	NA	rs3819946	0.42	0.42	0.419	0.460663	0.1421	0.7669	0.3386	0.525	0.4724	0.16	0.78	0.31	0.48	0.2799	0.78	1	T	0.0	B	0.001	B	0.000	N	1.000	P	-1.375	N	4.15	T	-0.946	T	0.004	T	0.139	-0.009	3.968	5.54	1.488	4.095	11.738	-0.0089	NA	1	0.130581	0.448933	NA	0.326	NA	10.7807524
574	9	37441650	37441650	T	C	exonic	ZBTB5	NA	nonsynonymous SNV	ZBTB5:NM_014872:exon2:c.A899G:p.D300G	exonic	ENSG00000168795	NA	nonsynonymous SNV	ENSG00000168795:ENST00000307750:exon2:c.A899G:p.D300G	Score=397;Name=lod=55	NA	9p13.2	NA	NA	NA	NA	rs17502738	0.11	0.11	0.107	0.0936502	0.2097	0.0099	0.1124	0.0393	0.1207	0.22	0.01	0.14	0.05	0.1545	0.22	0.34	T	0.0	B	0.0	B	0.009	N	0.781	P	0.55	N	3.0	T	-0.927	T	0.000	T	0.028	1.544	11.11	5.65	2.371	3.664	10.362	1.543531	1.543531	0.02	0.191628	0.056287	NA	0.232	NA	10.7775054
574	11	111749349	111749349	A	T	exonic	FDXACB1	NA	nonsynonymous SNV	FDXACB1:NM_138378:exon2:c.T260A:p.I87N	exonic	ENSG00000255561,ENSG00000258529	NA	nonsynonymous SNV	ENSG00000255561:ENST00000260257:exon2:c.T260A:p.I87N,ENSG00000258529:ENST00000524880:exon2:c.T260A:p.I87N	Score=490;Name=lod=131	NA	11q23.1	NA	Name=CTCF,Rad21,TCF4	Name=18	NA	rs611010	0.91	0.91	0.917	0.92472	0.832	0.9712	0.9049	0.9425	0.9622	0.84	0.99	0.89	0.94	0.8895	0.99	1	T	0.0	B	0.0	B	0.000	N	0.000	P	-3.63	N	2.03	T	-0.942	T	0.000	T	0.15	1.398	10.61	6.17	1.157	5.877	13.065	1.397531	1.397531	1	0.834755	0.9192	NA	0.906	NA	10.7770784
574	1	216172380	216172380	A	G	exonic	USH2A	NA	nonsynonymous SNV	USH2A:NM_206933:exon34:c.T6506C:p.I2169T	exonic	ENSG00000042781	NA	nonsynonymous SNV	ENSG00000042781:ENST00000307340:exon34:c.T6506C:p.I2169T,ENSG00000042781:ENST00000366943:exon34:c.T6506C:p.I2169T	Score=407;Name=lod=60	NA	1q41	NA	NA	NA	NA	rs10864219	0.59	0.59	0.582	0.59345	0.497	0.8343	0.6513	0.4206	0.637	0.5	0.85	0.62	0.43	0.5567	0.85	0.65	T	0.094	B	0.016	B	0.589	N	0.000	P	-0.55	N	0.66	T	-0.984	T	0.000	T	0.074	0.866	8.51	5.77	2.199	2.395	11.547	0.866247	NA	0.19	0.502674	0.438493	NA	0.551	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000041888.1|RCV000126249.1;CLNDSDB=.|.;CLNDSDBID=.|.	10.7769594
574	9	110084328	110084328	C	T	exonic	RAD23B	NA	nonsynonymous SNV	RAD23B:NM_001244713:exon7:c.C683T:p.A228V,RAD23B:NM_001244724:exon7:c.C530T:p.A177V,RAD23B:NM_002874:exon7:c.C746T:p.A249V	exonic	ENSG00000119318	NA	nonsynonymous SNV	ENSG00000119318:ENST00000358015:exon7:c.C746T:p.A249V,ENSG00000119318:ENST00000416373:exon7:c.C530T:p.A177V	Score=586;Name=lod=322	NA	9q31.2	NA	NA	NA	NA	rs1805329	0.17	0.17	0.13	0.152756	0.1789	0.2014	0.3055	0.0076	0.1636	0.21	0.19	0.24	0.02	0.1953	0.24	0.28	T	0.299	B	0.091	B	0.288	N	0.945	P	0.695	N	2.08	T	-0.913	T	0.000	T	0.064	3.455	17.7	5.28	2.626	3.697	19.280	3.455281	3.455281	0.09	0.183372	0.049024	NA	0.138	NA	10.7757614
575	5	151771852	151771852	G	A	exonic	NMUR2	NA	nonsynonymous SNV	NMUR2:NM_020167:exon4:c.C1148T:p.P383L	exonic	ENSG00000132911	NA	nonsynonymous SNV	ENSG00000132911:ENST00000255262:exon4:c.C1148T:p.P383L	NA	NA	5q33.1	NA	NA	NA	NA	rs4958532	0.13	0.13	0.105	0.122804	0.2038	0.0258	0.2954	0.0121	0.1667	0.21	0.04	0.27	0.01	0.1745	0.27	0.11	T	0.02	B	0.012	B	0.012	N	0.625	P	1.935	M	-0.42	T	-1.083	T	0.000	T	0.085	0.587	7.167	3.38	1.101	3.298	11.493	0.586858	NA	0.01	0.18093	0.053336	NA	0.152	NA	10.7741034
575	6	32629963	32629963	C	T	exonic	HLA-DQB1	NA	nonsynonymous SNV	HLA-DQB1:NM_001243961:exon3:c.G442A:p.V148I,HLA-DQB1:NM_002123:exon3:c.G442A:p.V148I	exonic	ENSG00000179344	NA	nonsynonymous SNV	ENSG00000179344:ENST00000399082:exon2:c.G172A:p.V58I,ENSG00000179344:ENST00000374943:exon3:c.G442A:p.V148I,ENSG00000179344:ENST00000399079:exon3:c.G442A:p.V148I,ENSG00000179344:ENST00000434651:exon3:c.G442A:p.V148I,ENSG00000179344:ENST00000399084:exon4:c.G442A:p.V148I	Score=395;Name=lod=54	NA	6p21.32	NA	NA	NA	NA	rs1049100	0.2	0.2	0.172	0.213059	0.2008	0.244	0.1527	0.2284	0.2157	0.22	0.16	0.19	0.24	0.1957	0.24	0	D	0.027	B	0.055	B	0.012	N	0.929	P	1.55	L	4.09	T	-1.002	T	0.005	T	0.375	2.166	13.2	3.64	2.065	0.196	6.057	2.166325	2.166325	0.02	0.163917	0.197016	NA	0.174	NA	10.7729164
575	20	47258763	47258763	C	T	exonic	PREX1	NA	nonsynonymous SNV	PREX1:NM_020820:exon29:c.G3718A:p.V1240I	exonic	ENSG00000124126	NA	nonsynonymous SNV	ENSG00000124126:ENST00000371941:exon29:c.G3718A:p.V1240I,ENSG00000124126:ENST00000396220:exon29:c.G3718A:p.V1240I	Score=393;Name=lod=53	NA	20q13.13	NA	NA	NA	NA	rs16993997	0.14	0.14	0.115	0.150759	0.1849	0.1528	0.2133	0.0182	0.2485	0.18	0.15	0.22	0.02	0.1899	0.22	0.17	T	0.005	B	0.008	B	0.308	U	0.995	P	0.49	N	1.21	T	-1.044	T	0.000	T	0.173	1.512	11.01	3.47	1.292	2.936	10.657	1.512329	1.512329	0.14	0.188721	0.056968	NA	0.123	NA	10.7698124
575	2	74699778	74699778	C	A	exonic	MRPL53	NA	nonsynonymous SNV	MRPL53:NM_053050:exon1:c.G10T:p.A4S	exonic	ENSG00000204822	NA	nonsynonymous SNV	ENSG00000204822:ENST00000258105:exon1:c.G10T:p.A4S,ENSG00000204822:ENST00000409710:exon1:c.G10T:p.A4S	NA	NA	2p13.1	Score=845;Name=V$RFX1_02	Name=Max,c-Myc,CCNT2,ELF1_(SC-631),NFKB,HEY1,BCL3,NF-YB,PAX5-N19,PAX5-C20,SRF,SETDB1,SIX5,Oct-2,THAP1_(SC-98174),p300,TCF12,USF-1,TBP,GTF2F1_(RAP-74),CEBPB,RXRA,CHD2_(N-1250),FOSL2,Pol2(b),TAF1,E2F6_(H-50),ETS1,ELK4,POU2F2,HMGN3,USF2,GABP,Pol2,NRSF,Mxi1_(bHLH),PU.1,YY1,Pol2(phosphoS2),Ini1,Egr-1,Sin3Ak-20,YY1_(C-20),MEF2A,HDAC2_(SC-6296),KAP1,Pol2-4H8,TR4,E2F6	Name=148	NA	rs1047911	0.5	0.5	0.508	0.516773	0.1581	0.8214	0.3098	0.8064	0.3272	0.16	0.83	0.27	0.8	0.268	0.83	0.82	T	0.0	B	0.0	B	0.077	N	1.000	P	0.345	N	0.76	T	-0.964	T	0.000	T	0.058	0.188	5.013	2.26	0.280	0.255	3.604	0.188132	NA	0.1	0.138055	0.70631	NA	0.413	NA	10.7691784
575	2	85893741	85893741	G	A	exonic	SFTPB	NA	nonsynonymous SNV	SFTPB:NM_000542:exon5:c.C428T:p.T143I,SFTPB:NM_198843:exon5:c.C428T:p.T143I	exonic	ENSG00000168878	NA	nonsynonymous SNV	ENSG00000168878:ENST00000519937:exon4:c.C392T:p.T131I,ENSG00000168878:ENST00000342375:exon5:c.C392T:p.T131I,ENSG00000168878:ENST00000393822:exon5:c.C428T:p.T143I,ENSG00000168878:ENST00000409383:exon5:c.C428T:p.T143I	Score=371;Name=lod=43	NA	2p11.2	NA	Name=ZNF263	Name=6	NA	rs1130866	0.51	0.51	0.543	0.519968	0.5388	0.2639	0.4193	0.8018	0.455	0.53	0.28	0.44	0.78	0.5037	0.78	0.9	T	0.0	B	0.001	B	0.149	N	0.151	P	-1.795	N	-0.69	T	-0.949	T	0.000	T	0.254	-1.964	0.007	3.33	0.561	3.237	6.990	-1.963919	NA	1	0.524884	0.743305	NA	0.587	NA	10.7659494
575	10	129905896	129905896	T	A	exonic	MKI67	NA	nonsynonymous SNV	MKI67:NM_001145966:exon12:c.A3128T:p.E1043V,MKI67:NM_002417:exon13:c.A4208T:p.E1403V	exonic	ENSG00000148773	NA	nonsynonymous SNV	ENSG00000148773:ENST00000368653:exon12:c.A3128T:p.E1043V,ENSG00000148773:ENST00000368654:exon13:c.A4208T:p.E1403V	NA	NA	10q26.2	NA	NA	NA	NA	rs3740423	0.16	0.16	0.126	0.139976	0.1958	0.1181	0.281	0.0098	0.181	0.2	0.15	0.29	0.01	0.1888	0.29	0.15	T	1.0	D	0.994	D	.	.	1.000	P	1.7	L	3.42	T	-0.945	T	0.000	T	0.16	2.392	13.96	2.66	0.650	-1.195	4.090	2.391928	2.391928	0.02	0.183023	0.030867	ID=COSM146355;OCCURENCE=1(stomach)	0.109	NA	10.7657104
576	6	46135489	46135489	T	C	exonic	ENPP5	NA	nonsynonymous SNV	ENPP5:NM_021572:exon2:c.A511G:p.I171V	exonic	ENSG00000112796	NA	nonsynonymous SNV	ENSG00000112796:ENST00000230565:exon2:c.A511G:p.I171V,ENSG00000112796:ENST00000371383:exon3:c.A511G:p.I171V	Score=567;Name=lod=270	NA	6p21.1	NA	NA	NA	NA	rs6926570	0.42	0.42	0.399	0.444489	0.5308	0.4494	0.4467	0.1899	0.6933	0.53	0.4	0.49	0.19	0.5128	0.53	0.46	T	0.379	B	0.241	B	0.000	D	0.003	P	1.08	L	-0.66	T	-0.860	T	0.156	T	0.205	2.903	15.67	5.33	2.145	7.618	15.624	2.903331	2.903331	0.33	0.529767	0.236269	NA	0.399	NA	10.7599664
576	4	123145751	123145751	T	A	exonic	KIAA1109	NA	synonymous SNV	KIAA1109:NM_015312:exon21:c.T2712A:p.P904P	exonic	ENSG00000138688	NA	synonymous SNV	ENSG00000138688:ENST00000449251:exon3:c.T336A:p.P112P,ENSG00000138688:ENST00000388738:exon21:c.T2712A:p.P904P,ENSG00000138688:ENST00000455637:exon21:c.T2712A:p.P904P,ENSG00000138688:ENST00000264501:exon23:c.T2712A:p.P904P	Score=696;Name=lod=897	NA	4q27	Score=774;Name=V$STAT5A_02	Name=CTCF	Name=29	NA	rs7658836	0.26	0.26	0.222	0.273762	0.2913	0.3562	0.3055	0.0408	0.4632	0.3	0.34	0.3	0.05	0.3132	0.34	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.987	T	0.000	T	.	1.177	9.787	3.87	0.892	0.023	9.020	1.176902	NA	NA	0.302314	0.085329	ID=COSM1131285;OCCURENCE=1(prostate)	0.174	NA	10.7598526
576	1	2444414	2444414	G	A	exonic	PANK4	NA	nonsynonymous SNV	PANK4:NM_018216:exon13:c.C1640T:p.A547V	exonic	ENSG00000157881	NA	nonsynonymous SNV	ENSG00000157881:ENST00000502512:exon3:c.C203T:p.A68V,ENSG00000157881:ENST00000378466:exon13:c.C1640T:p.A547V,ENSG00000157881:ENST00000435556:exon13:c.C1523T:p.A508V	NA	NA	1p36.32	NA	NA	NA	NA	rs7535528	0.28	0.28	0.256	0.225639	0.3867	0.3046	0.2983	0.0136	0.2137	0.38	0.35	0.32	0.02	0.3141	0.38	0.02	D	0.769	P	0.119	B	0.364	N	1.000	P	1.585	L	3.19	T	-0.867	T	0.000	T	0.359	1.822	12.05	5.59	2.635	3.927	18.568	1.822331	1.822331	0.03	0.374826	0.07172	NA	0.196	NA	10.7577074
576	9	115968797	115968797	C	T	exonic	FKBP15	NA	nonsynonymous SNV	FKBP15:NM_015258:exon4:c.G316A:p.A106T	exonic	ENSG00000119321	NA	nonsynonymous SNV	ENSG00000119321:ENST00000238256:exon4:c.G316A:p.A106T,ENSG00000119321:ENST00000414250:exon4:c.G391A:p.A131T,ENSG00000119321:ENST00000446284:exon4:c.G391A:p.A131T	Score=611;Name=lod=406	NA	9q32	Score=741;Name=V$MYOGNF1_01	NA	NA	NA	rs1133618	0.18	0.18	0.2	0.190096	0.2078	0.0228	0.2161	0.3298	0.137	0.22	0.02	0.21	0.3	0.177	0.3	0.69	T	0.006	B	0.015	B	.	.	0.988	P	0.175	N	0.97	T	-0.957	T	0.000	T	0.058	0.345	5.87	2.84	0.329	1.143	6.322	0.344614	NA	0.59	0.191169	0.277573	NA	0.196	NA	10.7573644
577	19	9006749	9006749	C	T	exonic	MUC16	NA	nonsynonymous SNV	MUC16:NM_024690:exon44:c.G39499A:p.V13167M	exonic	ENSG00000181143	NA	nonsynonymous SNV	ENSG00000181143:ENST00000397910:exon44:c.G39499A:p.V13167M	NA	NA	19p13.2	NA	NA	NA	NA	rs75444444	0.17	0.17	0.201	0.198283	0.1889	0.1399	0.1153	0.2859	0.2086	0.19	0.1	0.12	0.28	0.1957	0.28	0	D	0.932	P	0.539	P	.	.	.	.	1.575	L	0.97	T	-1.003	T	0.000	T	0.088	0.45	6.442	-3.6	-0.648	-3.453	3.475	0.449704	NA	0.1	0.193813	0.252196	NA	0.254	NA	10.7549204
577	11	6541225	6541225	C	G	exonic	DNHD1	NA	nonsynonymous SNV	DNHD1:NM_173589:exon8:c.C1678G:p.Q560E,DNHD1:NM_144666:exon9:c.C1678G:p.Q560E	exonic	ENSG00000179532	NA	nonsynonymous SNV	ENSG00000179532:ENST00000527990:exon7:c.C1678G:p.Q560E,ENSG00000179532:ENST00000354685:exon8:c.C1678G:p.Q560E,ENSG00000179532:ENST00000254579:exon9:c.C1678G:p.Q560E	NA	NA	11p15.4	Score=1000;Name=V$AP4_Q6	NA	NA	NA	rs11603869	0.13	0.13	0.127	0.142572	0.1909	0.0327	0.1628	0.1233	0.2178	0.2	0.04	0.14	0.13	0.1748	0.21	1	T	0.372	B	0.083	B	0.615	N	1.000	P	0.975	L	2.79	T	-1.052	T	0.000	T	0.104	1.42	10.69	3.63	1.401	1.531	9.850	1.420306	1.420306	0.06	0.214153	0.123807	NA	0.225	NA	10.7534804
577	6	144852201	144852201	G	A	exonic	UTRN	NA	nonsynonymous SNV	UTRN:NM_007124:exon41:c.G5920A:p.A1974T	exonic	ENSG00000152818	NA	nonsynonymous SNV	ENSG00000152818:ENST00000367545:exon41:c.G5920A:p.A1974T	Score=343;Name=lod=33	NA	6q24.2	NA	NA	NA	NA	rs12204734	0.1	0.1	0.098	0.128794	0.2018	0.0605	0.0965	0.0068	0.3119	0.19	0.06	0.12	0.01	0.1819	0.2	0.06	T	0.002	B	0.004	B	0.005	N	0.000	P	1.79	L	1.14	T	-1.076	T	0.038	T	0.088	1.975	12.56	3.62	1.296	1.641	5.997	1.975171	1.975171	0.13	0.196163	0.034498	NA	0.101	NA	10.7534704
577	8	143833850	143833850	G	A	exonic	LYPD2	NA	nonsynonymous SNV	LYPD2:NM_205545:exon1:c.C20T:p.A7V	exonic	ENSG00000197353	NA	nonsynonymous SNV	ENSG00000197353:ENST00000359228:exon1:c.C20T:p.A7V	NA	NA	8q24.3	NA	NA	NA	NA	rs11775636	0.24	0.24	0.256	0.249601	0.1899	0.4018	0.1628	0.205	0.2761	0.2	0.4	0.16	0.21	0.2128	0.4	0.66	T	0.002	B	0.001	B	0.084	N	1.000	P	0.13	N	-1.6	D	-1.097	T	0.000	T	0.007	-0.584	1.377	-8.41	-1.930	-2.198	8.505	-0.58438	NA	1	0.179777	0.20945	NA	0.21	NA	10.7508564
577	3	195615376	195615376	A	G	exonic	TNK2	NA	synonymous SNV	TNK2:NM_001010938:exon2:c.T273C:p.D91D,TNK2:NM_005781:exon2:c.T84C:p.D28D	exonic	ENSG00000061938	NA	synonymous SNV	ENSG00000061938:ENST00000316664:exon2:c.T84C:p.D28D,ENSG00000061938:ENST00000333602:exon2:c.T84C:p.D28D,ENSG00000061938:ENST00000381916:exon2:c.T273C:p.D91D,ENSG00000061938:ENST00000392400:exon2:c.T84C:p.D28D,ENSG00000061938:ENST00000428187:exon2:c.T180C:p.D60D,ENSG00000061938:ENST00000439230:exon2:c.T84C:p.D28D,ENSG00000061938:ENST00000447060:exon2:c.T84C:p.D28D,ENSG00000061938:ENST00000427576:exon3:c.T276C:p.D92D,ENSG00000061938:ENST00000433111:exon4:c.T84C:p.D28D	Score=638;Name=lod=523	NA	3q29	Score=900;Name=V$CREBP1CJUN_01	Name=NRSF	NA	NA	rs3747669	0.42	0.42	0.446	0.442692	0.2922	0.4583	0.4164	0.6694	0.2935	0.29	0.43	0.36	0.66	0.3383	0.66	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.095	T	0.000	T	.	-0.792	0.697	-5.99	-1.458	-0.816	16.029	-0.792193	NA	NA	0.286279	0.593509	NA	0.391	NA	10.7498876
577	22	26422980	26422980	A	G	exonic	MYO18B	NA	nonsynonymous SNV	MYO18B:NM_032608:exon43:c.A7040G:p.Q2347R	exonic	ENSG00000133454	NA	nonsynonymous SNV	ENSG00000133454:ENST00000335473:exon43:c.A7040G:p.Q2347R,ENSG00000133454:ENST00000407587:exon43:c.A7043G:p.Q2348R,ENSG00000133454:ENST00000536101:exon43:c.A7040G:p.Q2347R	NA	NA	22q12.1	NA	NA	NA	NA	rs2236005	0.35	0.35	0.384	0.426318	0.174	0.244	0.2522	0.9107	0.3425	0.16	0.24	0.23	0.86	0.257	0.86	1	T	0.0	B	0.0	B	0.051	N	1.000	P	-1.935	N	-1.86	D	-0.944	T	0.000	T	0.117	-2.419	0.003	3.78	1.056	2.406	4.701	-2.419485	NA	1	0.153967	0.768236	NA	0.514	NA	10.7483664
577	16	3447282	3447282	C	G	UTR5	ZSCAN32	NM_017810:c.-7158G>C	NA	NA	exonic	ENSG00000140987	NA	nonsynonymous SNV	ENSG00000140987:ENST00000396846:exon1:c.G276C:p.E92D,ENSG00000140987:ENST00000573719:exon1:c.G276C:p.E92D,ENSG00000140987:ENST00000574940:exon1:c.G276C:p.E92D,ENSG00000140987:ENST00000396852:exon2:c.G276C:p.E92D,ENSG00000140987:ENST00000571906:exon2:c.G276C:p.E92D,ENSG00000140987:ENST00000573327:exon2:c.G276C:p.E92D,ENSG00000140987:ENST00000576500:exon2:c.G276C:p.E92D	Score=317;Name=lod=26	NA	16p13.3	NA	NA	NA	NA	rs27241	0.25	0.25	0.243	0.257388	0.2475	0.131	0.2262	0.379	0.2556	0.25	0.13	0.23	0.39	0.3392	0.39	0.01	D	0.997	D	0.992	D	0.115	U	0.079	P	.	.	3.18	T	-0.933	T	0.000	T	0.171	1.703	11.65	2.35	0.285	0.238	5.310	1.70313	1.70313	0	NA	NA	NA	0.413	NA	10.7466334
577	10	26355906	26355906	G	A	exonic	MYO3A	NA	nonsynonymous SNV	MYO3A:NM_017433:exon11:c.G956A:p.R319H	exonic	ENSG00000095777	NA	nonsynonymous SNV	ENSG00000095777:ENST00000543632:exon10:c.G956A:p.R319H,ENSG00000095777:ENST00000265944:exon11:c.G956A:p.R319H	Score=488;Name=lod=128	NA	10p12.1	Score=857;Name=V$POU3F2_01	NA	NA	NA	rs3824700	0.4	0.4	0.399	0.39357	0.5527	0.2937	0.3473	0.3116	0.4765	0.57	0.29	0.34	0.3	0.485	0.57	1	T	0.0	B	0.0	B	0.000	N	0.000	P	-2.33	N	-0.87	T	-0.924	T	0.000	T	0.062	-0.156	3.24	5.56	0.949	4.608	6.739	-0.155574	NA	1	0.550116	0.367907	NA	0.457	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000039050.1;CLNDSDB=.;CLNDSDBID=.	10.7455174
578	16	4310468	4310468	C	G	exonic	TFAP4	NA	nonsynonymous SNV	TFAP4:NM_003223:exon5:c.G654C:p.Q218H	exonic	ENSG00000090447	NA	nonsynonymous SNV	ENSG00000090447:ENST00000204517:exon5:c.G654C:p.Q218H	Score=626;Name=lod=467	NA	16p13.3	NA	Name=GR,HA-E2F1,c-Myc	Name=10	NA	rs251732	0.67	0.67	0.633	0.672724	0.506	0.7589	0.6369	0.8336	0.5634	0.51	0.77	0.62	0.82	0.5832	0.82	0.57	T	0.0	B	0.0	B	0.079	N	1.000	P	-0.69	N	-5.09	D	-0.916	T	0.000	T	0.042	1.579	11.24	2.12	0.552	0.599	3.182	1.579246	1.579246	0.39	0.499186	0.786755	ID=COSM1377904;OCCURENCE=1(large_intestine)	0.63	NA	10.7449474
578	7	122078414	122078414	T	G	exonic	CADPS2	NA	synonymous SNV	CADPS2:NM_001009571:exon16:c.A2448C:p.T816T,CADPS2:NM_001167940:exon17:c.A2457C:p.T819T,CADPS2:NM_017954:exon17:c.A2457C:p.T819T	exonic	ENSG00000081803	NA	synonymous SNV	ENSG00000081803:ENST00000313070:exon16:c.A2448C:p.T816T,ENSG00000081803:ENST00000334010:exon16:c.A2460C:p.T820T,ENSG00000081803:ENST00000412584:exon16:c.A2448C:p.T816T,ENSG00000081803:ENST00000449022:exon17:c.A2457C:p.T819T	Score=762;Name=lod=1665	NA	7q31.32	Score=890;Name=V$OCT1_02	NA	NA	NA	rs2074589	0.3	0.3	0.273	0.284145	0.2982	0.3889	0.3761	0.1346	0.2986	0.28	0.43	0.37	0.12	0.315	0.43	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.877	T	0.000	T	.	0.555	7.004	5.71	2.172	1.420	11.122	0.55545	NA	NA	0.311371	0.144628	NA	0.297	NA	10.7420956
578	12	122380838	122380838	C	T	exonic	WDR66	NA	nonsynonymous SNV	WDR66:NM_001178003:exon7:c.C1148T:p.T383M,WDR66:NM_144668:exon7:c.C1148T:p.T383M	exonic	ENSG00000158023	NA	nonsynonymous SNV	ENSG00000158023:ENST00000288912:exon7:c.C1148T:p.T383M,ENSG00000158023:ENST00000397454:exon7:c.C1148T:p.T383M	NA	NA	12q24.31	NA	NA	NA	NA	rs34768683	0.08	0.08	0.087	0.118211	0.0239	0.0754	0.0303	0.2209	0.183	0.02	0.06	0.04	0.22	0.0543	0.22	0.09	T	0.989	D	0.648	P	0.022	N	1.000	P	1.78	L	0.65	T	-1.084	T	0.000	T	0.195	2.593	14.63	3.1	1.054	0.262	5.332	2.592619	2.592619	0.14	0.018766	0.182088	NA	0.101	NA	10.7363674
579	1	152286367	152286367	C	A	exonic	FLG	NA	nonsynonymous SNV	FLG:NM_002016:exon3:c.G995T:p.G332V	exonic	ENSG00000143631	NA	nonsynonymous SNV	ENSG00000143631:ENST00000368799:exon3:c.G995T:p.G332V	NA	NA	1q21.3	NA	NA	NA	NA	rs41267154	0.31	0.31	0.279	0.340655	0.171	0.6062	0.4193	0.115	0.4908	0.17	0.62	0.35	0.13	0.2603	0.62	0.24	T	1.0	D	0.995	D	.	.	1.000	P	2.14	M	4.69	T	-0.920	T	0.008	T	0.069	1.003	9.095	1.2	0.200	-1.020	5.380	1.002721	NA	0.28	0.167907	0.132093	NA	0.217	NA	10.7341264
579	20	61463522	61463522	C	A	exonic	COL9A3	NA	nonsynonymous SNV	COL9A3:NM_001853:exon25:c.C1304A:p.A435E	exonic	ENSG00000092758	NA	nonsynonymous SNV	ENSG00000092758:ENST00000343916:exon25:c.C1304A:p.A435E	NA	NA	20q13.33	NA	Name=FOXA2_(SC-6554)	NA	NA	rs751557	0.21	0.21	0.208	0.212859	0.2177	0.0496	0.1729	0.447	0.0879	0.21	0.06	0.18	0.41	0.182	0.41	0.83	T	0.081	B	0.061	B	0.657	N	1.000	P	-0.115	N	-3.27	D	-1.093	T	0.000	T	0.085	1.371	10.51	4.23	2.584	0.934	12.510	1.37113	1.37113	0.86	0.206279	0.396505	ID=COSM1413000;OCCURENCE=1(large_intestine)	0.167	NA	10.7273544
580	14	24901249	24901249	A	C	exonic	KHNYN	NA	nonsynonymous SNV	KHNYN:NM_015299:exon3:c.A782C:p.K261T	exonic	ENSG00000100441	NA	nonsynonymous SNV	ENSG00000100441:ENST00000251343:exon3:c.A782C:p.K261T,ENSG00000100441:ENST00000553935:exon3:c.A782C:p.K261T,ENSG00000100441:ENST00000556842:exon3:c.A782C:p.K261T	NA	NA	14q12	Score=949;Name=V$AREB6_04	Name=CTCF,ELF1_(SC-631),Rad21,BCLAF1_(M33-P5B11),Pol2,Pol2(phosphoS2),SMC3_(ab9263),CTCFL_(SC-98982),CTCF_(C-20),ZBTB7A_(SC-34508),NFKB,ZNF263	NA	NA	rs3742520	0.45	0.45	0.393	0.405152	0.5636	0.5208	0.5807	0.0552	0.4714	0.57	0.53	0.56	0.09	0.5036	0.57	0.02	D	0.028	B	0.007	B	0.324	U	1.000	P	0.805	L	1.8	T	-0.961	T	0.000	T	0.293	0.365	5.982	2.28	0.182	1.941	3.854	0.365043	NA	0.01	0.541977	0.13005	ID=COSM1562675;OCCURENCE=1(large_intestine)	0.413	NA	10.7241564
580	10	23297252	23297252	G	A	exonic	ARMC3	NA	nonsynonymous SNV	ARMC3:NM_173081:exon15:c.G1877A:p.R626Q	exonic	ENSG00000165309	NA	nonsynonymous SNV	ENSG00000165309:ENST00000376528:exon12:c.G1088A:p.R363Q,ENSG00000165309:ENST00000298032:exon15:c.G1877A:p.R626Q,ENSG00000165309:ENST00000409049:exon15:c.G1877A:p.R626Q,ENSG00000165309:ENST00000409983:exon15:c.G1877A:p.R626Q	Score=420;Name=lod=68	NA	10p12.2	NA	NA	NA	NA	rs10828395	0.16	0.16	0.149	0.188498	0.1859	0.12	0.0951	0.2821	0.2014	0.18	0.11	0.1	0.24	0.2459	0.27	0.66	T	0.287	B	0.036	B	0.385	N	0.000	P	0.625	N	2.42	T	-1.065	T	0.000	T	0.273	2.272	13.55	5.56	2.603	2.748	15.028	2.271992	2.271992	0.11	0.180839	0.273163	NA	0.109	NA	10.7206944
580	1	152957887	152957887	G	A	exonic	SPRR1A	NA	nonsynonymous SNV	SPRR1A:NM_001199828:exon2:c.G181A:p.V61I,SPRR1A:NM_005987:exon2:c.G181A:p.V61I	exonic	ENSG00000169474	NA	nonsynonymous SNV	ENSG00000169474:ENST00000368762:exon1:c.G181A:p.V61I,ENSG00000169474:ENST00000307122:exon2:c.G181A:p.V61I	Score=243;Name=lod=13	NA	1q21.3	NA	NA	NA	NA	rs1611764	0.58	0.58	0.568	0.561102	0.5348	0.6319	0.4524	0.6278	0.502	0.53	0.65	0.5	0.65	0.5345	0.65	0.12	T	0.828	P	0.542	P	0.817	N	1.000	P	.	.	2.48	T	-1.025	T	0.021	T	0.052	1.983	12.59	3.77	1.389	1.015	7.763	1.983175	1.983175	0.19	0.543488	0.636632	NA	0.522	NA	10.7205454
580	2	207569623	207569623	A	C	exonic	DYTN	NA	nonsynonymous SNV	DYTN:NM_001093730:exon5:c.T427G:p.S143A	exonic	ENSG00000232125	NA	nonsynonymous SNV	ENSG00000232125:ENST00000452335:exon5:c.T427G:p.S143A	NA	NA	2q33.3	Score=821;Name=V$PAX4_01	NA	NA	NA	rs116768218	0.02	0.02	0.01	0.0131789	0.0398	NA	0.0245	0.003	0.0051	0.04	NA	0.02	0.01	0.033	0.041	0.26	T	0.625	P	0.266	B	.	.	1.000	N	1.185	L	-0.72	T	-1.042	T	0.060	T	0.062	0.241	5.303	2.63	1.009	0.469	5.391	0.241324	NA	0.66	0.041029	0.007603	NA	NA	NA	10.7195044
580	7	87564497	87564497	C	G	exonic	ADAM22	NA	nonsynonymous SNV	ADAM22:NM_004194:exon2:c.C242G:p.P81R,ADAM22:NM_016351:exon2:c.C242G:p.P81R,ADAM22:NM_021721:exon2:c.C242G:p.P81R,ADAM22:NM_021722:exon2:c.C242G:p.P81R,ADAM22:NM_021723:exon2:c.C242G:p.P81R	exonic	ENSG00000008277	NA	nonsynonymous SNV	ENSG00000008277:ENST00000398203:exon1:c.C143G:p.P48R,ENSG00000008277:ENST00000265727:exon2:c.C242G:p.P81R,ENSG00000008277:ENST00000315984:exon2:c.C242G:p.P81R,ENSG00000008277:ENST00000398201:exon2:c.C242G:p.P81R,ENSG00000008277:ENST00000398204:exon2:c.C242G:p.P81R,ENSG00000008277:ENST00000398209:exon2:c.C242G:p.P81R,ENSG00000008277:ENST00000412441:exon2:c.C242G:p.P81R,ENSG00000008277:ENST00000439864:exon2:c.C242G:p.P81R	NA	NA	7q21.12	Score=892;Name=V$AREB6_01	NA	Name=24	NA	rs2279542	0.63	0.63	0.635	0.630391	0.5229	0.5407	0.6282	0.9834	0.3579	0.52	0.52	0.59	0.97	0.5761	0.97	0.7	T	0.002	B	0.009	B	0.154	N	1.000	P	1.27	L	4.56	T	-0.989	T	0.000	T	0.175	0.35	5.901	-5.26	-1.699	-1.004	1.067	0.350386	NA	0.16	0.516243	0.891913	NA	0.63	NA	10.7180904
581	12	48919796	48919796	C	T	exonic	OR8S1	NA	nonsynonymous SNV	OR8S1:NM_001005203:exon1:c.C382T:p.R128C	exonic	ENSG00000197376	NA	nonsynonymous SNV	ENSG00000197376:ENST00000310194:exon1:c.C382T:p.R128C	Score=433;Name=lod=77	NA	12q13.11	NA	Name=CTCF	NA	NA	rs12425460	0.59	0.59	0.588	0.578874	0.5139	0.6895	0.6599	0.4879	0.5971	0.54	0.72	0.65	0.48	0.5746	0.72	0.01	D	0.003	B	0.003	B	0.013	N	0.603	P	1.01	L	4.99	T	-1.059	T	0.000	T	0.117	1.692	11.62	3.07	1.345	-0.820	8.056	1.691514	1.691514	0.03	0.531163	0.495461	NA	0.572	NA	10.7136704
581	11	27720937	27720937	C	T	exonic	BDNF	NA	nonsynonymous SNV	BDNF:NM_170734:exon1:c.G16A:p.E6K	exonic	ENSG00000176697	NA	nonsynonymous SNV	ENSG00000176697:ENST00000395986:exon1:c.G16A:p.E6K	NA	NA	11p14.1	NA	Name=ZNF263,Pol2	Name=144	NA	rs66866077	0.02	0.02	0.012	0.0151757	0.0368	NA	0.0432	NA	0.0092	0.03	NA	0.05	NA	0.0357	0.05	0	D	0.938	P	0.248	B	0.658	U	1.000	N	.	.	0.52	T	-1.070	T	0.018	T	0.088	1.793	11.95	0.204	-0.056	0.277	3.743	1.792906	1.792906	0.03	0.047376	0.012355	NA	0.087	NA	10.7134574
581	10	26446312	26446312	G	A	exonic	MYO3A	NA	nonsynonymous SNV	MYO3A:NM_017433:exon26:c.G2867A:p.S956N	exonic	ENSG00000095777	NA	nonsynonymous SNV	ENSG00000095777:ENST00000265944:exon26:c.G2867A:p.S956N	Score=513;Name=lod=162	NA	10p12.1	NA	NA	NA	NA	rs3758449	0.46	0.46	0.458	0.455272	0.5646	0.3552	0.451	0.4304	0.4826	0.57	0.38	0.43	0.4	0.5064	0.57	0.84	T	0.0	B	0.001	B	0.000	N	0.000	P	-0.56	N	-0.56	T	-0.950	T	0.000	T	0.017	0.531	6.877	4.17	0.961	5.327	9.520	0.531306	NA	0.76	0.549186	0.466182	ID=COSM146910;OCCURENCE=1(stomach),2(large_intestine)	0.514	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000039031.1;CLNDSDB=.;CLNDSDBID=.	10.7131474
581	11	69063393	69063393	T	C	exonic	MYEOV	NA	nonsynonymous SNV	MYEOV:NM_138768:exon3:c.T476C:p.V159A	exonic	ENSG00000172927	NA	nonsynonymous SNV	ENSG00000172927:ENST00000535407:exon2:c.T302C:p.V101A,ENSG00000172927:ENST00000308946:exon3:c.T476C:p.V159A,ENSG00000172927:ENST00000441339:exon3:c.T476C:p.V159A	NA	NA	11q13.3	NA	Name=Egr-1,Pol2-4H8	NA	NA	rs7103126	0.4	0.4	0.404	0.454872	0.169	0.4643	0.1916	0.8533	0.3875	0.16	0.47	0.21	0.82	0.2767	0.82	0	D	0.0	B	0.0	B	.	.	1.000	P	0	N	1.87	T	-1.022	T	0.000	T	0.02	-0.52	1.627	-1.73	-1.628	-4.270	5.559	-0.520073	NA	1	0.176176	0.722045	NA	0.514	NA	10.7114574
581	14	104559922	104559922	C	G	exonic	ASPG	NA	nonsynonymous SNV	ASPG:NM_001080464:exon3:c.C286G:p.L96V	exonic	ENSG00000166183	NA	nonsynonymous SNV	ENSG00000166183:ENST00000455920:exon3:c.C286G:p.L96V,ENSG00000166183:ENST00000546892:exon3:c.C286G:p.L96V,ENSG00000166183:ENST00000551177:exon3:c.C286G:p.L96V	Score=425;Name=lod=71	NA	14q32.33	Score=928;Name=V$CEBPA_01	NA	NA	NA	rs1744284	0.4	0.4	0.394	0.41254	0.1809	0.3869	0.3314	0.6815	0.3712	0.19	0.4	0.36	0.75	0.2738	0.75	0.03	D	0.004	B	0.012	B	0.000	N	1.000	P	1.035	L	1.3	T	-0.999	T	0.000	T	0.365	-0.145	3.291	1.01	-0.348	2.059	5.606	-0.144993	NA	0.1	0.169771	0.550794	NA	0.188	NA	10.7088624
581	4	9922130	9922130	C	T	exonic	SLC2A9	NA	nonsynonymous SNV	SLC2A9:NM_020041:exon7:c.G881A:p.R294H,SLC2A9:NM_001001290:exon8:c.G794A:p.R265H	exonic	ENSG00000109667	NA	nonsynonymous SNV	ENSG00000109667:ENST00000264784:exon7:c.G881A:p.R294H,ENSG00000109667:ENST00000309065:exon8:c.G794A:p.R265H,ENSG00000109667:ENST00000506583:exon9:c.G794A:p.R265H	NA	NA	4p16.1	Score=874;Name=V$NF1_Q6	NA	NA	NA	rs3733591	0.29	0.29	0.278	0.294129	0.1909	0.6845	0.2075	0.0393	0.4039	0.21	0.69	0.18	0.05	0.2459	0.69	.	.	1.0	D	0.997	D	0.342	N	0.997	P	2.395	M	-0.81	T	-0.902	T	0.000	T	0.07	2.346	13.8	1.57	-0.019	0.218	9.255	2.345619	2.345619	0.05	0.189419	0.071266	NA	0.188	NA	10.7071144
581	11	102398593	102398593	C	T	exonic	MMP7	NA	nonsynonymous SNV	MMP7:NM_002423:exon2:c.G230A:p.R77H	exonic	ENSG00000137673	NA	nonsynonymous SNV	ENSG00000137673:ENST00000260227:exon2:c.G230A:p.R77H	NA	NA	11q22.2	NA	Name=CEBPB,p300_(N-15),JunD,c-Jun	Name=30	NA	rs10502001	0.18	0.18	0.163	0.133586	0.2237	0.248	0.1484	0.0076	0.0828	0.21	0.29	0.16	0.01	0.1854	0.29	0.17	T	0.021	B	0.007	B	0.062	N	1.000	P	1.195	L	1.26	T	-1.071	T	0.000	T	0.041	1.019	9.161	-7.85	-1.561	-0.363	18.316	1.018645	NA	0.29	0.219121	0.046074	NA	0.145	NA	10.7051124
581	11	6239344	6239344	G	A	exonic	FAM160A2	NA	nonsynonymous SNV	FAM160A2:NM_001098794:exon9:c.C1472T:p.T491M,FAM160A2:NM_032127:exon9:c.C1514T:p.T505M	exonic	ENSG00000051009	NA	nonsynonymous SNV	ENSG00000051009:ENST00000265978:exon9:c.C1514T:p.T505M,ENSG00000051009:ENST00000449352:exon9:c.C1472T:p.T491M,ENSG00000051009:ENST00000524416:exon9:c.C1472T:p.T491M	Score=491;Name=lod=132	NA	11p15.4	Score=739;Name=V$PAX4_04	NA	Name=3	NA	rs3750944	0.53	0.53	0.572	0.528954	0.5417	0.5	0.4294	0.6165	0.498	0.54	0.53	0.43	0.6	0.5308	0.6	0.24	T	0.051	B	0.013	B	0.030	N	1.000	P	0.69	N	3.1	T	-0.983	T	0.000	T	0.055	0.783	8.13	5.5	0.929	1.772	6.959	0.782895	NA	0.09	0.555763	0.579354	NA	0.435	NA	10.7050704
582	8	101648164	101648164	C	G	exonic	SNX31	NA	nonsynonymous SNV	SNX31:NM_152628:exon3:c.G217C:p.D73H	exonic	ENSG00000174226	NA	nonsynonymous SNV	ENSG00000174226:ENST00000520352:exon2:c.G19C:p.D7H,ENSG00000174226:ENST00000311812:exon3:c.G217C:p.D73H,ENSG00000174226:ENST00000520661:exon3:c.G220C:p.D74H,ENSG00000174226:ENST00000520743:exon4:c.G295C:p.D99H	Score=507;Name=lod=154	NA	8q22.3	NA	Name=MafK_(ab50322)	NA	NA	rs2187016	0.27	0.27	0.263	0.33127	0.165	0.2579	0.2795	0.5234	0.3548	0.17	0.22	0.28	0.48	0.2472	0.48	0.02	D	0.81	P	0.715	P	0.131	N	0.000	P	1.385	L	1.53	T	-0.903	T	0.000	T	0.345	2.789	15.29	1.95	0.079	0.190	8.866	2.788555	2.788555	0.05	0.216512	0.455288	NA	0.283	NA	10.7046214
582	6	31125257	31125257	C	A	exonic	CCHCR1	NA	stopgain	CCHCR1:NM_001105563:exon1:c.G121T:p.E41X,CCHCR1:NM_001105564:exon1:c.G121T:p.E41X	exonic	ENSG00000204536	NA	stopgain	ENSG00000204536:ENST00000396268:exon1:c.G121T:p.E41X,ENSG00000204536:ENST00000426967:exon1:c.G121T:p.E41X,ENSG00000204536:ENST00000451521:exon1:c.G121T:p.E41X,ENSG00000204536:ENST00000488920:exon1:c.G121T:p.E41X	Score=272;Name=lod=17	NA	6p21.33	NA	NA	NA	NA	rs72856718	0.09	0.09	0.076	0.08127	0.1123	0.0347	0.1383	0.0666	0.0767	0.12	0.04	0.15	0.06	0.0989	0.15	0.3	T	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	4.759	26.7	3.02	1.215	0.856	7.680	4.75863	4.75863	0	0.085422	0.054003	NA	0.051	NA	10.703378
582	11	34937813	34937813	G	A	exonic	APIP	NA	nonsynonymous SNV	APIP:NM_015957:exon1:c.C19T:p.R7W	exonic	ENSG00000149089	NA	nonsynonymous SNV	ENSG00000149089:ENST00000395787:exon1:c.C19T:p.R7W	NA	NA	11p13	NA	Name=EBF,HA-E2F1,Pol2-4H8,CCNT2,HEY1,AP-2gamma,TBP,TAF1,Pol2,ELF1_(SC-631)	Name=148	NA	rs2956114	0.43	0.43	0.384	0.434704	0.3539	0.7371	0.3977	0.2239	0.5174	0.36	0.71	0.39	0.26	0.4217	0.71	0.05	D	0.74	P	0.075	B	0.384	N	0.989	P	0	N	2.19	T	-0.944	T	0.000	T	0.048	2.476	14.24	2.5	0.561	0.295	10.852	2.476444	2.476444	0.13	0.354565	0.242721	NA	0.464	NA	10.7031684
582	2	80529956	80529956	T	C	exonic	LRRTM1	NA	nonsynonymous SNV	LRRTM1:NM_178839:exon2:c.A989G:p.N330S	exonic	ENSG00000162951	NA	nonsynonymous SNV	ENSG00000162951:ENST00000295057:exon2:c.A989G:p.N330S,ENSG00000162951:ENST00000409148:exon2:c.A989G:p.N330S,ENSG00000162951:ENST00000417012:exon2:c.A989G:p.N330S,ENSG00000162951:ENST00000433224:exon2:c.A989G:p.N330S	Score=664;Name=lod=666	NA	2p12	Score=742;Name=V$TCF11MAFG_01	NA	NA	NA	rs6733871	0.37	0.37	0.363	0.367412	0.1839	0.4831	0.3213	0.5076	0.2802	0.19	0.55	0.28	0.48	0.2693	0.55	.	.	0.0	B	0.0	B	0.000	N	0.000	P	-1.79	N	1.08	T	-0.926	T	0.000	T	0.024	-0.165	3.194	3.46	0.219	2.149	10.573	-0.16522	NA	0.56	0.178488	0.449841	NA	0.326	NA	10.7016454
583	19	15569378	15569378	G	C	exonic	RASAL3	NA	nonsynonymous SNV	RASAL3:NM_022904:exon7:c.C751G:p.L251V	exonic	ENSG00000105122	NA	nonsynonymous SNV	ENSG00000105122:ENST00000343625:exon7:c.C751G:p.L251V	Score=511;Name=lod=159	NA	19p13.12	NA	NA	NA	NA	rs58123634	0.03	0.03	0.039	0.038738	0.0447	0.005	0.0231	0.0522	0.0603	0.05	0.0017	0.02	0.04	0.046	0.051	0.79	T	0.633	P	0.234	B	0.022	U	0.573	N	0.095	N	-3.21	D	-0.400	T	0.154	T	0.065	1.326	10.35	3.42	0.874	0.013	10.225	1.325523	1.325523	0.68	0.048402	0.050787	NA	0.043	NA	10.6942314
583	7	155531080	155531080	A	G	exonic	RBM33	NA	nonsynonymous SNV	RBM33:NM_053043:exon11:c.A1720G:p.T574A	exonic	ENSG00000184863	NA	nonsynonymous SNV	ENSG00000184863:ENST00000401878:exon11:c.A1720G:p.T574A	Score=259;Name=lod=15	NA	7q36.3	Score=784;Name=V$AHRARNT_02	NA	NA	NA	rs3735576	0.36	0.36	0.354	0.365415	0.1869	0.3135	0.281	0.7239	0.1779	0.19	0.34	0.29	0.7	0.2575	0.7	1	T	0.0	B	0.001	B	0.285	N	0.001	P	0.6	N	1.01	T	-0.933	T	0.000	T	0.255	-0.815	0.637	2.89	0.503	1.813	7.324	-0.814922	NA	0.31	0.196377	0.613374	NA	0.384	NA	10.6925564
583	7	139746793	139746793	C	T	exonic	PARP12	NA	nonsynonymous SNV	PARP12:NM_022750:exon5:c.G877A:p.V293I	exonic	ENSG00000059378	NA	nonsynonymous SNV	ENSG00000059378:ENST00000263549:exon5:c.G877A:p.V293I,ENSG00000059378:ENST00000473341:exon5:c.G877A:p.V293I	Score=431;Name=lod=75	NA	7q34	NA	NA	NA	NA	rs34111764	0.08	0.08	0.085	0.0978435	0.0408	NA	0.0375	0.298	0.0297	0.04	NA	0.03	0.26	0.0561	0.26	0.35	T	0.714	P	0.288	B	0.011	N	1.000	P	1.675	L	3.22	T	-0.886	T	0.000	T	0.063	1.085	9.431	3.67	0.756	2.699	9.984	1.085463	NA	0.35	0.044535	0.263731	NA	0.109	NA	10.6918984
583	13	23898664	23898664	A	G	exonic	SGCG	NA	nonsynonymous SNV	SGCG:NM_000231:exon8:c.A860G:p.N287S	exonic	ENSG00000102683	NA	nonsynonymous SNV	ENSG00000102683:ENST00000218867:exon8:c.A860G:p.N287S,ENSG00000102683:ENST00000537476:exon9:c.A860G:p.N287S,ENSG00000102683:ENST00000545013:exon9:c.A860G:p.N287S	Score=278;Name=lod=18	NA	13q12.12	NA	NA	Name=20	NA	rs1800354	0.89	0.89	0.859	0.877796	0.8946	0.999	0.9308	0.7027	0.9346	0.9	1	0.93	0.72	0.8817	1	1	T	0.0	B	0.0	B	0.001	N	1.000	P	-1.95	N	-1.82	D	-0.928	T	0.000	T	0.072	-0.56	1.471	5.41	1.305	4.017	14.422	-0.559727	NA	1	0.867209	0.731049	NA	0.841	NA	10.6898244
583	1	119575818	119575818	C	G	exonic	WARS2	NA	nonsynonymous SNV	WARS2:NM_015836:exon6:c.G799C:p.A267P	exonic	ENSG00000116874	NA	nonsynonymous SNV	ENSG00000116874:ENST00000235521:exon6:c.G799C:p.A267P,ENSG00000116874:ENST00000537870:exon6:c.G517C:p.A173P	NA	NA	1p12	NA	NA	NA	NA	rs3790549	0.1	0.1	0.089	0.096845	0.0437	0.2143	0.0331	0.1127	0.0542	0.04	0.18	0.06	0.11	0.0569	0.18	0.1	T	0.507	P	0.433	B	0.070	N	1.000	P	-0.195	N	0.72	T	-1.044	T	0.049	T	0.144	1.789	11.94	4.88	2.785	2.312	11.814	1.789287	1.789287	0.25	0.04314	0.103041	NA	0.13	NA	10.6895934
583	9	90500909	90500909	C	T	exonic	SPATA31E1	NA	nonsynonymous SNV	SPATA31E1:NM_178828:exon4:c.C1507T:p.P503S	exonic	ENSG00000177992	NA	nonsynonymous SNV	ENSG00000177992:ENST00000325643:exon4:c.C1507T:p.P503S	NA	NA	9q22.1	NA	NA	NA	NA	rs75035814	0.09	0.09	0.099	0.0920527	0.0497	NA	0.0403	0.2852	0.0061	0.05	NA	0.05	0.28	0.0514	0.28	0.45	T	0.996	D	0.898	P	0.073	N	1.000	P	0.225	N	3.25	T	-1.036	T	0.000	T	0.044	-0.619	1.249	-4.39	-1.333	-0.226	3.838	-0.619035	NA	0.78	0.04407	0.230368	NA	0.101	NA	10.6881634
583	19	54327313	54327313	C	A	exonic	NLRP12	NA	nonsynonymous SNV	NLRP12:NM_001277126:exon1:c.G116T:p.G39V,NLRP12:NM_001277129:exon1:c.G116T:p.G39V,NLRP12:NM_144687:exon1:c.G116T:p.G39V	exonic	ENSG00000142405	NA	nonsynonymous SNV	ENSG00000142405:ENST00000324134:exon1:c.G116T:p.G39V,ENSG00000142405:ENST00000345770:exon1:c.G116T:p.G39V,ENSG00000142405:ENST00000351894:exon1:c.G116T:p.G39V,ENSG00000142405:ENST00000354278:exon1:c.G116T:p.G39V,ENSG00000142405:ENST00000391772:exon1:c.G116T:p.G39V,ENSG00000142405:ENST00000391773:exon1:c.G116T:p.G39V,ENSG00000142405:ENST00000391775:exon1:c.G116T:p.G39V,ENSG00000142405:ENST00000535162:exon1:c.G116T:p.G39V	NA	NA	19q13.42	Score=839;Name=V$EVI1_04	NA	NA	NA	rs34436714	0.25	0.25	0.236	0.255591	0.2008	0.1776	0.2291	0.3858	0.2352	0.2	0.15	0.24	0.43	0.2294	0.43	0.2	T	0.134	B	0.062	B	0.027	N	0.000	P	1.875	L	0.13	T	-0.965	T	0.000	T	0.497	2.131	13.08	4.48	2.224	1.465	13.021	2.130976	2.130976	0.01	0.215233	0.367453	NA	0.232	NA	10.6879004
584	14	68029313	68029313	G	A	exonic	PLEKHH1	NA	nonsynonymous SNV	PLEKHH1:NM_020715:exon7:c.G965A:p.R322Q	exonic	ENSG00000054690	NA	nonsynonymous SNV	ENSG00000054690:ENST00000329153:exon7:c.G965A:p.R322Q	Score=530;Name=lod=190	NA	14q24.1	NA	NA	NA	NA	rs2236235	0.18	0.18	0.161	0.173123	0.2207	0.2887	0.1758	0.0136	0.2188	0.22	0.3	0.17	0.01	0.2131	0.3	0.47	T	0.016	B	0.004	B	0.002	N	0.000	P	1.995	M	1.97	T	-0.948	T	0.000	T	0.032	0.914	8.718	2.26	0.310	2.565	8.094	0.913728	NA	0.1	0.214648	0.03881	NA	0.123	NA	10.6848854
584	6	97058574	97058574	G	A	exonic	FHL5	NA	nonsynonymous SNV	FHL5:NM_001170807:exon5:c.G631A:p.V211M,FHL5:NM_020482:exon6:c.G631A:p.V211M	exonic	ENSG00000112214	NA	nonsynonymous SNV	ENSG00000112214:ENST00000541107:exon5:c.G631A:p.V211M,ENSG00000112214:ENST00000326771:exon6:c.G631A:p.V211M	NA	NA	6q16.1	NA	NA	NA	NA	rs2252816	0.36	0.36	0.313	0.337859	0.3887	0.5625	0.4971	0.0371	0.3476	0.4	0.54	0.45	0.04	0.386	0.54	0.06	T	0.484	P	0.23	B	0.228	N	1.000	P	2.605	M	-2.24	D	-0.793	T	0.354	T	0.04	3.446	17.66	-11.8	-2.198	-1.087	8.879	3.445731	3.445731	0.11	0.377674	0.09714	NA	0.29	NA	10.6809594
584	3	16419309	16419309	C	T	exonic	RFTN1	NA	nonsynonymous SNV	RFTN1:NM_015150:exon5:c.G742A:p.E248K	exonic	ENSG00000131378	NA	nonsynonymous SNV	ENSG00000131378:ENST00000432519:exon4:c.G634A:p.E212K,ENSG00000131378:ENST00000334133:exon5:c.G742A:p.E248K,ENSG00000131378:ENST00000451036:exon5:c.G742A:p.E248K	NA	NA	3p24.3	NA	NA	NA	NA	rs34276015	0.03	0.03	0.026	0.0461262	0.0517	0.0119	0.0375	0.0008	0.1431	0.06	0.0035	0.04	0.0041	0.0513	0.06	0.56	T	0.617	P	0.121	B	0.128	N	1.000	N	1.59	L	1.53	T	-1.023	T	0.018	T	0.108	1.679	11.57	5.24	2.443	3.342	12.825	1.679255	1.679255	0.15	0.050581	0.009305	NA	0.087	NA	10.6797524
584	11	77825320	77825320	T	C	exonic	ALG8	NA	nonsynonymous SNV	ALG8:NM_001007027:exon6:c.A665G:p.N222S,ALG8:NM_024079:exon6:c.A665G:p.N222S	exonic	ENSG00000159063	NA	nonsynonymous SNV	ENSG00000159063:ENST00000532440:exon1:c.A119G:p.N40S,ENSG00000159063:ENST00000525755:exon5:c.A512G:p.N171S,ENSG00000159063:ENST00000299626:exon6:c.A665G:p.N222S,ENSG00000159063:ENST00000376156:exon6:c.A665G:p.N222S,ENSG00000159063:ENST00000525870:exon6:c.A401G:p.N134S,ENSG00000159063:ENST00000530454:exon6:c.A668G:p.N223S,ENSG00000159063:ENST00000527099:exon7:c.A401G:p.N134S	Score=505;Name=lod=151	NA	11q14.1	NA	NA	Name=2	NA	rs665278	0.15	0.15	0.13	0.146366	0.2286	0.0942	0.2003	0.0439	0.2157	0.23	0.1	0.21	0.04	0.1991	0.23	0.92	T	0.001	B	0.004	B	0.067	N	0.774	P	1.01	L	-1.72	D	-1.100	T	0.000	T	0.14	-0.269	2.71	1.56	0.064	0.541	5.020	-0.269072	NA	0.42	0.229147	0.073864	NA	0.181	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000082158.1;CLNDSDB=.;CLNDSDBID=.	10.6764864
585	11	1857751	1857751	C	G	exonic	SYT8	NA	nonsynonymous SNV	SYT8:NM_138567:exon6:c.C655G:p.P219A	exonic	ENSG00000149043	NA	nonsynonymous SNV	ENSG00000149043:ENST00000341958:exon5:c.C613G:p.P205A,ENSG00000149043:ENST00000381968:exon6:c.C655G:p.P219A	NA	NA	11p15.5	NA	NA	NA	NA	rs3741231	0.34	0.34	0.305	0.337859	0.3926	0.3026	0.3732	0.2398	0.4254	0.4	0.31	0.39	0.23	0.3886	0.4	0.04	D	0.666	P	0.162	B	.	.	0.121	P	1.93	M	2.99	T	-0.915	T	0.000	T	0.379	2.675	14.91	2.33	0.459	1.232	8.09	2.675253	2.675253	0.03	0.38047	0.261126	NA	0.261	NA	10.6716634
585	20	42089613	42089613	G	A	exonic	SRSF6	NA	synonymous SNV	SRSF6:NM_006275:exon6:c.G945A:p.V315V	exonic	ENSG00000124193	NA	synonymous SNV	ENSG00000124193:ENST00000244020:exon6:c.G945A:p.V315V	Score=536;Name=lod=201	NA	20q13.11	Score=879;Name=V$MAZR_01	Name=HEY1,Pol2-4H8	Name=6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.305371	NA	NA	NA	NA	NA	NA	NA	10.6665666
585	19	9006663	9006663	C	T	exonic	MUC16	NA	synonymous SNV	MUC16:NM_024690:exon44:c.G39585A:p.T13195T	exonic	ENSG00000181143	NA	synonymous SNV	ENSG00000181143:ENST00000397910:exon44:c.G39585A:p.T13195T	NA	NA	19p13.2	Score=748;Name=V$NRSF_01	NA	NA	NA	rs376322394	NA	NA	NA	0.000998403	NA	0.001	NA	0.0023	0.001	NA	NA	NA	NA	0.0004	0.0005	.	.	.	.	.	.	.	.	.	.	.	.	.	.	-1.037	T	0.059	T	.	-0.582	1.387	-5.98	-5.897	-11.109	4.038	-0.581746	NA	NA	0	0.000502	NA	NA	NA	10.6662666
585	15	33357262	33357262	A	G	exonic	FMN1	NA	nonsynonymous SNV	FMN1:NM_001103184:exon2:c.T1388C:p.L463P,FMN1:NM_001277313:exon6:c.T2057C:p.L686P	exonic	ENSG00000248905	NA	nonsynonymous SNV	ENSG00000248905:ENST00000334528:exon2:c.T1388C:p.L463P,ENSG00000248905:ENST00000558197:exon2:c.T1388C:p.L463P,ENSG00000248905:ENST00000559047:exon3:c.T2057C:p.L686P	Score=477;Name=lod=116	NA	15q13.3	NA	Name=p300	Name=68	NA	rs2306277	0.44	0.44	0.423	0.44988	0.5646	0.2054	0.5634	0.4342	0.5245	0.56	0.22	0.59	0.39	0.5306	0.59	0.89	T	0.0	B	0.0	B	0.000	N	.	.	-1.055	N	1.49	T	-0.950	T	0.000	T	0.147	-0.341	2.387	5.13	0.916	6.540	13.146	-0.34075	NA	1	0.572104	0.460616	ID=COSM147870;OCCURENCE=1(stomach)	0.457	NA	10.6660294
585	11	5968728	5968728	T	C	exonic	OR56A3	NA	nonsynonymous SNV	OR56A3:NM_001003443:exon1:c.T152C:p.M51T	exonic	ENSG00000184478	NA	nonsynonymous SNV	ENSG00000184478:ENST00000329564:exon1:c.T152C:p.M51T	Score=304;Name=lod=23	NA	11p15.4	NA	NA	NA	NA	rs1840178	0.57	0.57	0.524	0.560903	0.5408	0.6548	0.6412	0.4871	0.5276	0.54	0.65	0.65	0.47	0.5659	0.65	0.03	D	0.0	B	0.001	B	0.331	N	1.000	P	-1.09	N	4.06	T	-1.061	T	0.000	T	0.047	0.041	4.229	3.99	0.980	1.113	8.944	0.041428	NA	0.07	0.560638	0.509995	NA	0.522	NA	10.6659954
586	3	121416623	121416623	G	C	exonic	GOLGB1	NA	nonsynonymous SNV	GOLGB1:NM_001256488:exon12:c.C2507G:p.T836S,GOLGB1:NM_001256486:exon13:c.C2747G:p.T916S,GOLGB1:NM_001256487:exon13:c.C2630G:p.T877S,GOLGB1:NM_004487:exon13:c.C2732G:p.T911S	exonic	ENSG00000173230	NA	nonsynonymous SNV	ENSG00000173230:ENST00000494517:exon12:c.C2624G:p.T875S,ENSG00000173230:ENST00000340645:exon13:c.C2732G:p.T911S,ENSG00000173230:ENST00000393667:exon13:c.C2747G:p.T916S	Score=578;Name=lod=299	NA	3q13.33	NA	NA	NA	NA	rs3732407	0.14	0.14	0.121	0.105431	0.2435	0.0476	0.147	0.0121	0.1196	0.25	0.06	0.19	0.02	0.1842	0.25	0.71	T	0.012	B	0.027	B	0.003	N	0.996	P	0.29	N	3.16	T	-0.945	T	0.000	T	0.074	0.64	7.435	4.48	1.493	3.941	12.094	0.639547	NA	0.33	0.241103	0.04108	NA	0.065	NA	10.6645304
586	17	56247101	56247101	C	A	exonic	OR4D2	NA	nonsynonymous SNV	OR4D2:NM_001004707:exon1:c.C85A:p.L29I	exonic	ENSG00000255713	NA	nonsynonymous SNV	ENSG00000255713:ENST00000545221:exon1:c.C85A:p.L29I	Score=378;Name=lod=46	NA	17q22	Score=973;Name=V$AREB6_04	NA	NA	NA	rs60994383	0.23	0.23	0.232	0.235224	0.2147	0.1657	0.1599	0.3775	0.1892	0.22	0.16	0.18	0.36	0.2269	0.36	0.14	T	0.001	B	0.005	B	0.373	N	1.000	P	0.82	L	8.36	T	-0.994	T	0.000	T	0.056	0.003	4.031	-5.02	-0.561	-2.547	2.287	0.003271	NA	0.18	0.228256	0.355651	NA	0.138	NA	10.6634774
586	11	43357557	43357557	G	A	intronic	API5	NA	NA	NA	exonic	ENSG00000166181	NA	nonsynonymous SNV	ENSG00000166181:ENST00000534600:exon13:c.G1505A:p.R502H	Score=653;Name=lod=601	NA	11p12	NA	NA	NA	NA	rs188033951	0.0005	0.0005	NA	0.000199681	0.001	NA	NA	NA	NA	0.0013	NA	NA	NA	0.0006	0.0016	.	.	0.474	P	0.058	B	.	.	1.000	N	.	.	1.68	T	-1.064	T	0.039	T	0.361	2.894	15.64	5.6	2.639	3.748	13.605	2.89422	2.89422	NA	0.001628	0.000227	NA	NA	NA	10.6634387
586	2	182783550	182783550	A	G	exonic	SSFA2	NA	synonymous SNV	SSFA2:NM_001130445:exon13:c.A2934G:p.L978L,SSFA2:NM_006751:exon13:c.A2934G:p.L978L	exonic	ENSG00000138434	NA	synonymous SNV	ENSG00000138434:ENST00000409136:exon5:c.A1461G:p.L487L,ENSG00000138434:ENST00000428267:exon12:c.A2475G:p.L825L,ENSG00000138434:ENST00000320370:exon13:c.A2934G:p.L978L,ENSG00000138434:ENST00000409001:exon13:c.A2934G:p.L978L,ENSG00000138434:ENST00000431877:exon13:c.A2934G:p.L978L	Score=625;Name=lod=462	NA	2q31.3	NA	Name=MafK_(ab50322)	NA	NA	rs78894663	0.0027	0.0027	0.003	0.00579073	0.001	NA	0.0029	0.0197	NA	NA	NA	0.0028	0.01	0.0025	0.027	.	.	.	.	.	.	.	.	1.000	D	.	.	.	.	-0.998	T	0.087	T	.	1.205	9.892	2.52	0.205	0.624	9.081	1.204576	NA	NA	0.000116	0.026782	NA	NA	NA	10.6630506
586	4	153896358	153896358	C	T	exonic	FHDC1	NA	nonsynonymous SNV	FHDC1:NM_033393:exon11:c.C1915T:p.R639C	exonic	ENSG00000137460	NA	nonsynonymous SNV	ENSG00000137460:ENST00000260008:exon11:c.C1915T:p.R639C,ENSG00000137460:ENST00000511601:exon12:c.C1915T:p.R639C	NA	NA	4q31.3	NA	NA	NA	NA	rs3811833	0.55	0.55	0.528	0.48143	0.7565	0.5466	0.5937	0.1445	0.5072	0.76	0.55	0.61	0.17	0.654	0.76	0.02	D	0.997	D	0.563	P	0.763	N	1.000	P	2.08	M	1.39	T	-1.004	T	0.000	T	0.069	3.191	16.68	3.68	2.622	0.141	13.886	3.191286	3.191286	0.09	0.760526	0.234226	NA	0.5	NA	10.6623074
586	9	74360096	74360096	C	T	exonic	TMEM2	NA	nonsynonymous SNV	TMEM2:NM_001135820:exon4:c.G872A:p.R291H,TMEM2:NM_013390:exon4:c.G872A:p.R291H	exonic	ENSG00000135048	NA	nonsynonymous SNV	ENSG00000135048:ENST00000377044:exon4:c.G872A:p.R291H,ENSG00000135048:ENST00000377066:exon4:c.G872A:p.R291H,ENSG00000135048:ENST00000542935:exon4:c.G872A:p.R291H	Score=412;Name=lod=63	NA	9q21.13	NA	NA	NA	NA	rs25689	0.23	0.23	0.233	0.284145	0.2187	0.1766	0.2752	0.3608	0.365	0.21	0.18	0.22	0.34	0.2411	0.34	0.23	T	0.0	B	0.001	B	0.028	N	0.000	P	-0.205	N	-0.66	T	-1.035	T	0.000	T	0.053	1.252	10.08	6.03	1.106	1.925	9.001	1.25199	1.25199	0.22	0.211279	0.328416	NA	0.304	NA	10.6622544
586	3	187088656	187088656	C	T	exonic	RTP4	NA	nonsynonymous SNV	RTP4:NM_022147:exon2:c.C236T:p.T79I	exonic	ENSG00000136514	NA	nonsynonymous SNV	ENSG00000136514:ENST00000259030:exon2:c.C236T:p.T79I	NA	NA	3q27.3	NA	NA	NA	NA	rs1047584	0.18	0.18	0.158	0.179712	0.2376	0.0536	0.2363	0.1831	0.2055	0.22	0.06	0.27	0.19	0.2037	0.27	0.13	T	0.905	P	0.599	P	0.110	N	1.000	P	1.04	L	2.19	T	-1.016	T	0.000	T	0.021	0.498	6.698	-7.78	-3.035	-1.121	0.425	0.497523	NA	0.01	0.235698	0.194054	NA	0.174	NA	10.6563354
586	19	6850767	6850767	C	T	exonic	VAV1	NA	nonsynonymous SNV	VAV1:NM_001258206:exon23:c.C2150T:p.T717M,VAV1:NM_001258207:exon23:c.C2120T:p.T707M,VAV1:NM_005428:exon24:c.C2216T:p.T739M	exonic	ENSG00000141968	NA	nonsynonymous SNV	ENSG00000141968:ENST00000304076:exon23:c.C2150T:p.T717M,ENSG00000141968:ENST00000539284:exon23:c.C1925T:p.T642M,ENSG00000141968:ENST00000596764:exon23:c.C2120T:p.T707M,ENSG00000141968:ENST00000599806:exon24:c.C2051T:p.T684M,ENSG00000141968:ENST00000602142:exon24:c.C2216T:p.T739M	NA	NA	19p13.3	NA	NA	NA	NA	rs36097961	0.03	0.03	0.016	0.01877	0.0586	0.004	0.0173	0.0015	0.0174	0.06	NA	0.02	0.0041	0.0514	0.067	0.31	T	0.65	P	0.34	B	0.070	N	1.000	N	0.52	N	-2.43	D	-0.662	T	0.078	T	0.081	1.654	11.49	-5.12	-0.785	-1.136	10.404	1.653804	1.653804	0.4	0.067442	0.013391	NA	0.014	NA	10.6558914
587	5	102343291	102343291	C	A	exonic	PAM	NA	synonymous SNV	PAM:NM_138821:exon18:c.C1824A:p.T608T,PAM:NM_000919:exon19:c.C2145A:p.T715T,PAM:NM_001177306:exon19:c.C2145A:p.T715T,PAM:NM_138766:exon19:c.C2145A:p.T715T,PAM:NM_138822:exon19:c.C2145A:p.T715T	exonic	ENSG00000145730	NA	synonymous SNV	ENSG00000145730:ENST00000274392:exon18:c.C1854A:p.T618T,ENSG00000145730:ENST00000348126:exon18:c.C1824A:p.T608T,ENSG00000145730:ENST00000304400:exon19:c.C2145A:p.T715T,ENSG00000145730:ENST00000346918:exon19:c.C2145A:p.T715T,ENSG00000145730:ENST00000379787:exon19:c.C285A:p.T95T,ENSG00000145730:ENST00000438793:exon19:c.C2145A:p.T715T,ENSG00000145730:ENST00000455264:exon19:c.C2145A:p.T715T	Score=599;Name=lod=364	NA	5q21.1	Score=861;Name=V$IRF1_01	NA	NA	NA	rs34746026	0.0009	0.0009	NA	0.00559105	0.003	NA	0.0014	NA	0.0245	0.0026	NA	NA	NA	0.005	0.011	.	.	.	.	.	.	.	.	1.000	D	.	.	.	.	-0.979	T	0.124	T	.	0.911	8.706	3.35	0.720	0.328	0.892	0.910841	NA	NA	0.004419	0.000908	NA	0.007	NA	10.6542476
587	20	14066276	14066276	C	T	exonic	MACROD2	NA	nonsynonymous SNV	MACROD2:NM_080676:exon3:c.C173T:p.T58I	exonic	ENSG00000172264	NA	nonsynonymous SNV	ENSG00000172264:ENST00000217246:exon3:c.C173T:p.T58I,ENSG00000172264:ENST00000310348:exon3:c.C173T:p.T58I	Score=590;Name=lod=334	NA	20p12.1	NA	NA	NA	NA	rs2990505	0.25	0.25	0.229	0.257788	0.2346	0.1895	0.2983	0.3056	0.2587	0.23	0.2	0.27	0.32	0.237	0.32	0.1	T	0.165	B	0.111	B	0.216	N	0.000	P	1.1	L	1.05	T	-1.081	T	0.000	T	0.065	1.961	12.51	4.81	2.724	2.427	12.947	1.960781	1.960781	0.18	0.209956	0.295379	ID=COSM149145;OCCURENCE=1(stomach)	0.203	NA	10.6517774
587	7	87160618	87160618	A	C	exonic	ABCB1	NA	nonsynonymous SNV	ABCB1:NM_000927:exon22:c.T2677G:p.S893A	exonic	ENSG00000085563	NA	nonsynonymous SNV	ENSG00000085563:ENST00000543898:exon19:c.T2485G:p.S829A,ENSG00000085563:ENST00000265724:exon22:c.T2677G:p.S893A	Score=545;Name=lod=218	NA	7q21.12	Score=959;Name=V$HSF2_01	NA	NA	NA	rs2032582	0.66	0.66	0.694	0.617013	0.5726	0.4683	0.572	0.9796	0.3579	0.57	0.55	0.59	0.97	0.5432	0.97	1	T	0.0	B	0.005	B	0.000	N	0.999	P	-0.98	N	-2.24	D	-0.903	T	0.000	T	0.057	0.196	5.057	3.72	0.319	2.118	14.563	0.196173	NA	1	0.568488	0.891966	NA	0.652	NA	10.6490454
587	1	33820134	33820134	C	T	exonic	PHC2	NA	nonsynonymous SNV	PHC2:NM_198040:exon8:c.G1423A:p.V475M	exonic	ENSG00000134686	NA	nonsynonymous SNV	ENSG00000134686:ENST00000373422:exon2:c.G241A:p.V81M,ENSG00000134686:ENST00000431992:exon7:c.G1336A:p.V446M,ENSG00000134686:ENST00000257118:exon8:c.G1423A:p.V475M,ENSG00000134686:ENST00000419414:exon9:c.G1426A:p.V476M	Score=395;Name=lod=54	NA	1p35.1	NA	NA	NA	NA	rs12026290	0.17	0.17	0.151	0.171526	0.2346	0.2113	0.17	0.0182	0.274	0.23	0.2	0.17	0.03	0.2117	0.24	0.03	D	0.412	B	0.172	B	0.848	N	0.003	P	1.39	L	1.8	T	-1.067	T	0.000	T	0.059	0.884	8.589	3.93	1.457	0.612	9.164	0.884024	NA	0.03	0.241744	0.05084	NA	0.145	NA	10.6452894
588	8	21550800	21550800	A	T	exonic	GFRA2	NA	nonsynonymous SNV	GFRA2:NM_001165039:exon7:c.T986A:p.L329Q,GFRA2:NM_001165038:exon8:c.T1070A:p.L357Q,GFRA2:NM_001495:exon9:c.T1385A:p.L462Q	exonic	ENSG00000168546	NA	nonsynonymous SNV	ENSG00000168546:ENST00000518077:exon7:c.T986A:p.L329Q,ENSG00000168546:ENST00000400782:exon8:c.T1070A:p.L357Q,ENSG00000168546:ENST00000517892:exon8:c.T1070A:p.L357Q,ENSG00000168546:ENST00000524240:exon9:c.T1385A:p.L462Q,ENSG00000168546:ENST00000517328:exon11:c.T1385A:p.L462Q	Score=371;Name=lod=43	NA	8p21.3	NA	NA	NA	NA	rs1128397	0.38	0.38	0.396	0.372005	0.4026	0.4296	0.3228	0.3396	0.3599	0.41	0.44	0.31	0.34	0.3867	0.44	0.06	T	0.997	D	0.879	P	0.003	N	0.037	P	1.87	L	1.61	T	-0.931	T	0.000	T	0.234	3.462	17.73	2.85	0.299	2.372	9.679	3.462459	3.462459	0.04	0.39921	0.333417	NA	0.377	NA	10.6448234
588	17	61623052	61623052	C	T	exonic	KCNH6	NA	nonsynonymous SNV	KCNH6:NM_030779:exon14:c.C2774T:p.T925M,KCNH6:NM_173092:exon14:c.C2507T:p.T836M	exonic	ENSG00000173826	NA	nonsynonymous SNV	ENSG00000173826:ENST00000314672:exon13:c.C2666T:p.T889M,ENSG00000173826:ENST00000456941:exon14:c.C2507T:p.T836M,ENSG00000173826:ENST00000581784:exon14:c.C2507T:p.T836M,ENSG00000173826:ENST00000583023:exon14:c.C2774T:p.T925M	NA	NA	17q23.3	Score=858;Name=V$CEBP_C	NA	NA	NA	rs35819807	0.16	0.16	0.163	0.139976	0.2485	0.0367	0.1052	0.1626	0.1288	0.25	0.04	0.12	0.17	0.1953	0.25	0.28	T	0.009	B	0.004	B	0.426	N	1.000	P	0.41	N	-5.58	D	-0.394	T	0.001	T	0.032	1.057	9.316	-7.62	-1.025	0.188	6.958	1.056938	NA	0.1	0.246744	0.164094	NA	0.152	NA	10.6427894
588	7	89984409	89984409	A	G	exonic	GTPBP10	NA	nonsynonymous SNV	GTPBP10:NM_033107:exon4:c.A329G:p.N110S	exonic	ENSG00000105793	NA	nonsynonymous SNV	ENSG00000105793:ENST00000222511:exon4:c.A329G:p.N110S,ENSG00000105793:ENST00000426366:exon4:c.A302G:p.N101S,ENSG00000105793:ENST00000450619:exon5:c.A380G:p.N127S	Score=454;Name=lod=93	NA	7q21.13	NA	NA	NA	NA	rs42664	0.52	0.52	0.49	0.51258	0.5517	0.6468	0.5317	0.3109	0.593	0.56	0.62	0.54	0.32	0.5684	0.62	.	.	0.277	B	0.223	B	0.000	D	0.000	P	0.495	N	2.04	T	-0.982	T	0.000	T	0.096	2.751	15.16	5.93	2.258	6.499	16.384	2.750984	2.750984	0.15	0.574436	0.361099	NA	0.507	NA	10.6387974
588	12	78530991	78530991	C	T	exonic	NAV3	NA	synonymous SNV	NAV3:NM_014903:exon19:c.C4476T:p.P1492P	exonic	ENSG00000067798	NA	synonymous SNV	ENSG00000067798:ENST00000550788:exon3:c.C363T:p.P121P,ENSG00000067798:ENST00000266692:exon17:c.C3945T:p.P1315P,ENSG00000067798:ENST00000228327:exon19:c.C4476T:p.P1492P,ENSG00000067798:ENST00000397909:exon19:c.C4476T:p.P1492P,ENSG00000067798:ENST00000536525:exon19:c.C4476T:p.P1492P	Score=557;Name=lod=245	NA	12q21.2	NA	NA	NA	NA	rs61754236	0.01	0.01	0.003	0.00519169	0.0109	NA	0.0043	0.0053	0.0051	0.01	NA	0.01	0.002	0.0081	0.011	.	.	.	.	.	.	.	.	1.000	D	.	.	.	.	-0.918	T	0.117	T	.	0.053	4.289	-5.07	-1.265	-0.014	7.644	0.052786	NA	NA	0.011068	0.006952	ID=COSM147568;OCCURENCE=1(stomach)	0.007	NA	10.6365986
588	1	78585086	78585086	T	C	exonic	GIPC2	NA	nonsynonymous SNV	GIPC2:NM_017655:exon4:c.T617C:p.L206P	exonic	ENSG00000137960	NA	nonsynonymous SNV	ENSG00000137960:ENST00000370759:exon4:c.T617C:p.L206P	NA	NA	1p31.1	Score=830;Name=V$PPARA_01	NA	Name=12	NA	rs540742	0.34	0.34	0.339	0.307109	0.2266	0.6637	0.1758	0.2186	0.2352	0.22	0.65	0.19	0.26	0.2531	0.65	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-2.69	N	-1.39	T	-1.038	T	0.032	T	0.056	-2.457	0.003	4.68	0.867	2.060	9.103	-2.457311	NA	1	0.218372	0.224694	NA	0.261	NA	10.6352614
589	2	201768238	201768238	C	T	exonic	NIF3L1	NA	nonsynonymous SNV	NIF3L1:NM_001142356:exon5:c.C832T:p.L278F,NIF3L1:NM_001136039:exon7:c.C971T:p.T324I,NIF3L1:NM_001142355:exon7:c.C890T:p.T297I,NIF3L1:NM_021824:exon7:c.C890T:p.T297I	exonic	ENSG00000196290	NA	nonsynonymous SNV	ENSG00000196290:ENST00000409588:exon5:c.C832T:p.L278F,ENSG00000196290:ENST00000359683:exon7:c.C890T:p.T297I,ENSG00000196290:ENST00000409020:exon7:c.C971T:p.T324I,ENSG00000196290:ENST00000416651:exon7:c.C971T:p.T324I,ENSG00000196290:ENST00000409357:exon8:c.C971T:p.T324I	Score=543;Name=lod=214	NA	2q33.1	NA	NA	NA	NA	rs7917	0.26	0.26	0.298	0.283347	0.2555	0.0149	0.1772	0.6694	0.1421	0.26	0.01	0.2	0.62	0.2218	0.62	0.37	T	0.0	B	0.0	B	0.000	N	0.996	P	.	.	1.07	T	-0.951	T	0.000	T	0.048	0.621	7.341	5.33	0.968	5.883	11.529	0.620919	NA	0.67	0.221359	0.578809	NA	0.348	NA	10.6346744
589	12	104341103	104341103	C	T	exonic	HSP90B1	NA	synonymous SNV	HSP90B1:NM_003299:exon17:c.C2277T:p.P759P	exonic	ENSG00000166598	NA	synonymous SNV	ENSG00000166598:ENST00000299767:exon17:c.C2277T:p.P759P	Score=476;Name=lod=115	NA	12q23.3	NA	NA	NA	NA	rs7645	0.45	0.45	0.463	0.45627	0.336	0.4692	0.4582	0.6362	0.3221	0.33	0.47	0.43	0.63	0.3742	0.63	0.08	T	.	.	.	.	0.000	D	0.000	P	.	.	2.98	T	-0.991	T	0.000	T	.	0.873	8.541	-5.92	-1.182	-2.780	5.348	0.873248	NA	NA	0.322209	0.5867	NA	0.471	NA	10.6342576
589	16	50744624	50744624	C	T	exonic	NOD2	NA	nonsynonymous SNV	NOD2:NM_022162:exon4:c.C802T:p.P268S	exonic	ENSG00000167207	NA	nonsynonymous SNV	ENSG00000167207:ENST00000300589:exon4:c.C802T:p.P268S	NA	NA	16q12.1	Score=773;Name=V$HEN1_02	NA	NA	NA	rs2066842	0.12	0.12	0.122	0.102037	0.2465	0.0079	0.1671	0.0272	0.1053	0.24	0.0017	0.19	0.04	0.1844	0.27	0.71	T	0.029	B	0.01	B	0.217	N	1.000	P	1.175	L	-0.33	T	-1.098	T	0.000	T	0.045	-1.853	0.009	-8.34	-1.444	-1.762	7.107	-1.852658	NA	0.39	0.26907	0.058007	NA	0.203	NA	10.6333634
589	3	58382846	58382846	C	T	exonic	PXK	NA	synonymous SNV	PXK:NM_017771:exon10:c.C903T:p.C301C	exonic	ENSG00000168297	NA	synonymous SNV	ENSG00000168297:ENST00000536660:exon7:c.C492T:p.C164C,ENSG00000168297:ENST00000383716:exon8:c.C804T:p.C268C,ENSG00000168297:ENST00000463280:exon8:c.C804T:p.C268C,ENSG00000168297:ENST00000302779:exon9:c.C852T:p.C284C,ENSG00000168297:ENST00000383715:exon9:c.C852T:p.C284C,ENSG00000168297:ENST00000479241:exon9:c.C852T:p.C284C,ENSG00000168297:ENST00000356151:exon10:c.C903T:p.C301C,ENSG00000168297:ENST00000484288:exon10:c.C903T:p.C301C	Score=478;Name=lod=117	NA	3p14.3	Score=948;Name=V$NKX25_01	NA	NA	NA	rs3191903	0.23	0.23	0.21	0.200679	0.3777	0.001	0.2839	0.1959	0.1718	0.36	NA	0.3	0.22	0.2827	0.37	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.135	T	0.000	T	.	1.333	10.37	5.5	2.861	1.606	19.592	1.332515	1.332515	NA	0.373256	0.205856	NA	0.319	NA	10.6330106
589	8	145642002	145642002	C	T	exonic	SLC39A4	NA	nonsynonymous SNV	SLC39A4:NM_130849:exon1:c.G172A:p.A58T	exonic	ENSG00000147804	NA	nonsynonymous SNV	ENSG00000147804:ENST00000301305:exon1:c.G172A:p.A58T,ENSG00000147804:ENST00000526658:exon1:c.G172A:p.A58T	NA	NA	8q24.3	NA	Name=Pol2-4H8,HEY1,TCF12,TBP,Pol2,HNF4G_(SC-6558)	Name=11	NA	rs2280838	0.48	0.48	0.455	0.433506	0.5567	0.373	0.4236	0.416	0.3998	0.58	0.41	0.48	0.42	0.5757	0.58	0.7	T	0.0	B	0.0	B	0.100	N	0.803	P	0.345	N	0.38	T	-1.026	T	0.000	T	0.385	2.808	15.35	-9.42	-1.950	-2.408	5.707	2.807508	2.807508	0.67	0.569765	0.430987	NA	0.442	NA	10.6311684
589	1	183094547	183094547	T	C	exonic	LAMC1	NA	nonsynonymous SNV	LAMC1:NM_002293:exon15:c.T2663C:p.L888P	exonic	ENSG00000135862	NA	nonsynonymous SNV	ENSG00000135862:ENST00000258341:exon15:c.T2663C:p.L888P	Score=361;Name=lod=39	NA	1q25.3	NA	Name=USF-1	NA	NA	rs20558	0.53	0.53	0.49	0.531749	0.5636	0.628	0.6254	0.3321	0.6033	0.57	0.58	0.58	0.38	0.5723	0.58	1	T	0.0	B	0.0	B	0.000	N	0.002	P	-1.95	N	0.22	T	-0.940	T	0.000	T	0.167	0.436	6.37	5.64	1.396	4.396	14.475	0.43641	NA	0.28	0.569535	0.374489	NA	0.442	NA	10.6278984
590	16	57762401	57762401	T	C	exonic	CCDC135	NA	nonsynonymous SNV	CCDC135:NM_032269:exon16:c.T2296C:p.C766R	exonic	ENSG00000159625	NA	nonsynonymous SNV	ENSG00000159625:ENST00000336825:exon15:c.T2101C:p.C701R,ENSG00000159625:ENST00000394337:exon16:c.T2296C:p.C766R,ENSG00000159625:ENST00000360716:exon17:c.T2296C:p.C766R	NA	NA	16q21	Score=876;Name=V$NF1_Q6	NA	NA	NA	rs2923147	0.39	0.39	0.381	0.394569	0.2256	0.3839	0.2954	0.7133	0.2188	0.23	0.38	0.3	0.7	0.2842	0.7	1	T	0.0	B	0.0	B	0.002	N	1.000	P	-2.295	N	1.28	T	-0.941	T	0.000	T	0.38	-1.228	0.059	4.16	1.184	1.019	8.033	-1.228281	NA	0.53	0.199022	0.637067	ID=COSM435439;OCCURENCE=1(breast)	0.326	NA	10.6245114
590	6	43412865	43412865	T	C	exonic	ABCC10	NA	nonsynonymous SNV	ABCC10:NM_033450:exon12:c.T2759C:p.I920T,ABCC10:NM_001198934:exon14:c.T2843C:p.I948T	exonic	ENSG00000124574	NA	nonsynonymous SNV	ENSG00000124574:ENST00000244533:exon12:c.T2759C:p.I920T,ENSG00000124574:ENST00000372530:exon14:c.T2843C:p.I948T	Score=428;Name=lod=73	NA	6p21.1	NA	NA	NA	NA	rs2125739	0.19	0.19	0.187	0.20008	0.2316	0.0804	0.1859	0.3079	0.1554	0.22	0.07	0.2	0.26	0.2243	0.32	0.81	T	0.0	B	0.001	B	0.012	N	1.000	P	-0.205	N	-2.7	D	-0.956	T	0.209	T	0.024	0.304	5.646	4.99	1.106	0.701	8.263	0.303835	NA	1	0.254884	0.317295	NA	0.181	NA	10.6225494
590	2	163124051	163124051	C	T	exonic	IFIH1	NA	nonsynonymous SNV	IFIH1:NM_022168:exon15:c.G2836A:p.A946T	exonic	ENSG00000115267	NA	nonsynonymous SNV	ENSG00000115267:ENST00000263642:exon15:c.G2836A:p.A946T	Score=422;Name=lod=69	Name=Immunoglobulin A,Type 1 diabetes,Type 1 diabetes autoantibodies	2q24.2	Score=886;Name=V$SRY_02	NA	NA	NA	rs1990760	0.37	0.37	0.34	0.356629	0.6054	0.1865	0.3905	0.1256	0.5644	0.61	0.22	0.45	0.11	0.5047	0.61	0.61	T	0.105	B	0.027	B	0.030	N	0.000	P	1.245	L	0.95	T	-0.945	T	0.000	T	0.084	0.048	4.264	3.87	1.243	0.669	7.731	0.048	NA	0.32	0.602907	0.185202	NA	0.457	NA	10.6203264
590	6	32609806	32609806	C	T	exonic	HLA-DQA1	NA	nonsynonymous SNV	HLA-DQA1:NM_002122:exon3:c.C389T:p.T130I	exonic	ENSG00000196735	NA	nonsynonymous SNV	ENSG00000196735:ENST00000343139:exon3:c.C389T:p.T130I,ENSG00000196735:ENST00000374949:exon3:c.C389T:p.T130I,ENSG00000196735:ENST00000395363:exon3:c.C389T:p.T130I,ENSG00000196735:ENST00000496318:exon3:c.C389T:p.T130I	Score=393;Name=lod=53	NA	6p21.32	NA	Name=Pol2,Pol2-4H8	Name=3	NA	rs707952	0.2	0.2	0.206	0.187101	0.2286	0.12	0.2392	0.2209	0.1309	0.21	0.15	0.27	0.21	0.239	0.27	0.33	T	0.009	B	0.016	B	0.141	N	0.671	P	1.575	L	6.0	T	-0.953	T	0.001	T	0.524	0.745	7.95	2.07	0.410	0.300	4.838	0.744573	NA	0.33	0.247324	0.225017	NA	0.239	NA	10.6184094
591	12	109723233	109723233	G	A	exonic	FOXN4	NA	synonymous SNV	FOXN4:NM_213596:exon8:c.C777T:p.S259S	exonic	ENSG00000139445	NA	nonsynonymous SNV	ENSG00000139445:ENST00000423960:exon5:c.C532T:p.R178W	Score=381;Name=lod=47	NA	12q24.11	NA	NA	NA	NA	rs17177336	0.09	0.09	0.092	0.0998403	0.1352	0.0288	0.1037	0.0749	0.1677	0.14	0.02	0.1	0.09	0.117	0.14	0	D	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.535	T	0.003	T	.	1.59	11.27	-9.23	-2.813	-0.245	17.771	1.590006	1.590006	0	0.134302	0.068316	NA	0.159	NA	10.613498
591	7	1595068	1595068	G	A	exonic	TMEM184A	NA	nonsynonymous SNV	TMEM184A:NM_001097620:exon2:c.C53T:p.A18V	exonic	ENSG00000164855	NA	nonsynonymous SNV	ENSG00000164855:ENST00000414730:exon1:c.C53T:p.A18V,ENSG00000164855:ENST00000297477:exon2:c.C53T:p.A18V,ENSG00000164855:ENST00000319010:exon2:c.C53T:p.A18V,ENSG00000164855:ENST00000319018:exon2:c.C53T:p.A18V,ENSG00000164855:ENST00000421923:exon2:c.C53T:p.A18V,ENSG00000164855:ENST00000431208:exon2:c.C53T:p.A18V,ENSG00000164855:ENST00000441933:exon2:c.C53T:p.A18V	NA	NA	7p22.3	Score=850;Name=V$CREB_Q2	Name=ZNF263,Sin3Ak-20,FOSL2,p300,CTCF,ELF1_(SC-631),GR,SP1,Mxi1_(bHLH)	Name=125	NA	rs17852421	0.24	0.24	0.229	0.222045	0.2455	0.1915	0.3631	0.1936	0.1677	0.26	0.18	0.33	0.2	0.2486	0.33	0.35	T	0.001	B	0.0	B	0.751	U	1.000	P	0.345	N	1.42	T	-0.972	T	0.000	T	0.249	0.291	5.573	-2.47	-0.333	-0.512	6.154	0.290622	NA	0.17	0.22684	0.188656	NA	0.304	NA	10.6123934
591	8	76452313	76452313	G	A	exonic	HNF4G	NA	nonsynonymous SNV	HNF4G:NM_004133:exon1:c.G86A:p.S29N	exonic	ENSG00000164749	NA	nonsynonymous SNV	ENSG00000164749:ENST00000396423:exon1:c.G86A:p.S29N	Score=437;Name=lod=80	NA	8q21.11	NA	NA	Name=3	NA	rs2943549	0.62	0.62	0.653	0.611821	0.5785	0.3938	0.4827	0.9516	0.5031	0.58	0.44	0.5	0.97	0.5729	0.97	1	T	0.0	B	0.0	B	0.036	N	0.000	P	0.09	N	-2.95	D	-0.946	T	0.000	T	0.008	-1.98	0.007	3.58	0.925	1.740	8.075	-1.98006	NA	0.87	0.571464	0.894278	NA	0.63	NA	10.6104694
591	2	71012734	71012734	C	G	exonic	FIGLA	NA	nonsynonymous SNV	FIGLA:NM_001004311:exon3:c.G422C:p.S141T	exonic	ENSG00000183733	NA	nonsynonymous SNV	ENSG00000183733:ENST00000332372:exon3:c.G422C:p.S141T	NA	NA	2p13.3	NA	Name=GATA-1,Sin3Ak-20,SMC3_(ab9263),Max,c-Myc,CTCF	Name=87	NA	rs7566476	0.75	0.75	0.762	0.762979	0.5626	0.9077	0.6873	0.882	0.7127	0.57	0.94	0.66	0.88	0.6231	0.94	0.95	T	0.0	B	0.0	B	0.891	N	1.000	P	-1.67	N	-3.71	D	-0.942	T	0.000	T	0.023	-1.681	0.012	3.24	0.701	1.504	6.039	-1.681187	NA	1	0.537964	0.813572	NA	0.71	NA	10.6096694
591	10	78944590	78944590	G	A	exonic	KCNMA1	NA	synonymous SNV	KCNMA1:NM_001271518:exon3:c.C525T:p.F175F,KCNMA1:NM_001014797:exon4:c.C687T:p.F229F,KCNMA1:NM_001161352:exon4:c.C687T:p.F229F,KCNMA1:NM_001161353:exon4:c.C687T:p.F229F,KCNMA1:NM_001271519:exon4:c.C687T:p.F229F,KCNMA1:NM_002247:exon4:c.C687T:p.F229F	exonic	ENSG00000156113	NA	synonymous SNV	ENSG00000156113:ENST00000604624:exon3:c.C270T:p.F90F,ENSG00000156113:ENST00000286627:exon4:c.C687T:p.F229F,ENSG00000156113:ENST00000286628:exon4:c.C687T:p.F229F,ENSG00000156113:ENST00000354353:exon4:c.C687T:p.F229F,ENSG00000156113:ENST00000372408:exon4:c.C498T:p.F166F,ENSG00000156113:ENST00000372437:exon4:c.C492T:p.F164F,ENSG00000156113:ENST00000372440:exon4:c.C687T:p.F229F,ENSG00000156113:ENST00000372443:exon4:c.C687T:p.F229F,ENSG00000156113:ENST00000404771:exon4:c.C687T:p.F229F,ENSG00000156113:ENST00000404857:exon4:c.C687T:p.F229F,ENSG00000156113:ENST00000406533:exon4:c.C687T:p.F229F,ENSG00000156113:ENST00000457953:exon4:c.C609T:p.F203F	Score=708;Name=lod=1002	NA	10q22.3	NA	NA	NA	NA	rs1131824	0.38	0.38	0.408	0.40595	0.335	0.249	0.2695	0.705	0.3333	0.34	0.24	0.3	0.68	0.3605	0.68	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.927	T	0.000	T	.	0.55	6.974	5.31	1.101	1.408	10.553	0.549742	NA	NA	0.361512	0.620744	NA	0.413	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117331.2;CLNDSDB=.;CLNDSDBID=.	10.6096546
591	13	44457925	44457925	A	G	exonic	LACC1	NA	nonsynonymous SNV	LACC1:NM_001128303:exon4:c.A760G:p.I254V,LACC1:NM_153218:exon4:c.A760G:p.I254V	exonic	ENSG00000179630	NA	nonsynonymous SNV	ENSG00000179630:ENST00000325686:exon4:c.A760G:p.I254V,ENSG00000179630:ENST00000441843:exon4:c.A760G:p.I254V	Score=624;Name=lod=456	Name=Leprosy,Crohn's disease	13q14.11	NA	NA	Name=20	NA	rs3764147	0.3	0.3	0.283	0.305911	0.2266	0.3472	0.3646	0.3048	0.3047	0.24	0.32	0.37	0.33	0.2702	0.37	1	T	0.001	B	0.001	B	0.001	N	0.971	P	-0.925	N	1.42	T	-0.914	T	0.000	T	0.024	-0.658	1.113	1.94	0.041	2.664	8.856	-0.657608	NA	1	0.230349	0.294371	NA	0.268	NA	10.6061844
591	17	685752	685752	G	A	exonic	RNMTL1	NA	nonsynonymous SNV	RNMTL1:NM_018146:exon1:c.G134A:p.G45E	exonic	ENSG00000171861	NA	nonsynonymous SNV	ENSG00000171861:ENST00000304478:exon1:c.G134A:p.G45E,ENSG00000171861:ENST00000574509:exon1:c.G134A:p.G45E	NA	NA	17p13.3	NA	Name=CHD2_(N-1250),IRF4_(M-17),YY1_(C-20),Pol2(phosphoS2),Pol2,TAF1,TBP,Pol2-4H8,ZNF263,KAP1,HA-E2F1,YY1	NA	NA	rs2249542	0.16	0.16	0.13	0.152356	0.2525	0.0923	0.1787	0.0469	0.2352	0.25	0.09	0.2	0.06	0.2129	0.26	1	T	0.261	B	0.042	B	0.215	N	0.037	P	1.32	L	2.28	T	-1.066	T	0.000	T	0.37	4.081	21	5.5	2.737	1.415	11.768	4.081462	4.081462	0	0.262209	0.085565	NA	0.152	NA	10.6057244
592	13	113909339	113909339	A	G	exonic	CUL4A	NA	nonsynonymous SNV	CUL4A:NM_001008895:exon18:c.A1931G:p.K644R,CUL4A:NM_003589:exon18:c.A1631G:p.K544R	exonic	ENSG00000139842	NA	nonsynonymous SNV	ENSG00000139842:ENST00000326335:exon18:c.A1631G:p.K544R,ENSG00000139842:ENST00000375440:exon18:c.A1931G:p.K644R,ENSG00000139842:ENST00000375441:exon18:c.A1631G:p.K544R,ENSG00000139842:ENST00000451881:exon18:c.A1631G:p.K544R	Score=420;Name=lod=68	NA	13q34	NA	NA	NA	NA	rs2302757	0.22	0.22	0.183	0.251597	0.2326	0.3353	0.3228	0.0136	0.456	0.24	0.32	0.3	0.02	0.2663	0.32	0.16	T	0.009	B	0.054	B	0.000	D	0.001	P	1.45	L	-0.87	T	-1.072	T	0.000	T	0.019	0.888	8.608	3.77	0.817	3.974	9.167	0.888485	NA	0.17	0.230698	0.049478	NA	0.188	NA	10.6037354
592	9	38396065	38396065	G	T	exonic	ALDH1B1	NA	nonsynonymous SNV	ALDH1B1:NM_000692:exon2:c.G320T:p.R107L	exonic	ENSG00000137124	NA	nonsynonymous SNV	ENSG00000137124:ENST00000377698:exon2:c.G320T:p.R107L	Score=441;Name=lod=83	NA	9p13.2	NA	Name=JunD	NA	NA	rs2073478	0.42	0.42	0.446	0.394968	0.6093	0.3036	0.3646	0.2572	0.4765	0.6	0.29	0.43	0.28	0.5177	0.6	0.01	D	.	.	.	.	0.002	N	0.003	P	.	.	-1.16	T	-0.901	T	0.000	T	0.091	3.477	17.79	2.79	0.332	2.228	7.741	3.47651	3.47651	0.01	0.603721	0.307308	ID=COSM1462466;OCCURENCE=1(large_intestine)	0.507	NA	10.6026124
592	7	143043240	143043240	C	T	exonic	CLCN1	NA	nonsynonymous SNV	CLCN1:NM_000083:exon18:c.C2180T:p.P727L	exonic	ENSG00000188037	NA	nonsynonymous SNV	ENSG00000188037:ENST00000343257:exon18:c.C2180T:p.P727L	NA	NA	7q34	NA	Name=CTCF	NA	NA	rs13438232	0.36	0.36	0.363	0.369409	0.4076	0.2768	0.2939	0.4236	0.4059	0.4	0.26	0.34	0.45	0.3974	0.45	0.04	D	0.546	P	0.122	B	0.165	N	0.003	P	0.88	L	-1.93	D	-0.988	T	0.000	T	0.109	0.686	7.665	3.45	0.825	0.850	4.005	0.685684	NA	0.19	0.426163	0.417612	NA	0.442	NA	10.6021704
592	10	60146061	60146061	T	C	exonic	TFAM	NA	synonymous SNV	TFAM:NM_001270782:exon2:c.T183C:p.S61S,TFAM:NM_003201:exon2:c.T183C:p.S61S	exonic	ENSG00000108064	NA	synonymous SNV	ENSG00000108064:ENST00000373895:exon2:c.T183C:p.S61S,ENSG00000108064:ENST00000487519:exon2:c.T183C:p.S61S	Score=374;Name=lod=44	NA	10q21.1	Score=855;Name=V$IRF7_01	NA	NA	NA	rs78325627	0.01	0.01	0.011	0.0091853	0.0268	NA	0.0144	0.0008	0.0082	0.03	NA	0.02	NA	0.0168	0.03	.	.	.	.	.	.	.	.	0.843	D	.	.	.	.	.	.	.	.	.	1.557	11.16	-3.33	-0.165	-0.679	3.896	1.557243	1.557243	NA	0.021163	0.002043	NA	0.007	NA	10.6019036
592	17	62045555	62045555	G	A	exonic	SCN4A	NA	synonymous SNV	SCN4A:NM_000334:exon6:c.C864T:p.N288N	exonic	ENSG00000007314	NA	synonymous SNV	ENSG00000007314:ENST00000435607:exon6:c.C864T:p.N288N,ENSG00000007314:ENST00000578147:exon6:c.C864T:p.N288N	Score=657;Name=lod=625	NA	17q23.3	Score=809;Name=V$PAX4_01	Name=USF-1,c-Myc,E2F6,USF2,E2F6_(H-50),Max	Name=3	NA	rs7218917	0.06	0.06	0.07	0.0736821	0.0179	0.0218	0.0245	0.2103	0.0348	0.01	0.02	0.02	0.2	0.0312	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.387215	NA	NA	0.015899	0.154111	NA	0.051	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118277.1;CLNDSDB=.;CLNDSDBID=.	10.6016676
592	1	79095581	79095581	T	C	exonic	IFI44L	NA	nonsynonymous SNV	IFI44L:NM_006820:exon4:c.T704C:p.I235T	exonic	ENSG00000137959	NA	nonsynonymous SNV	ENSG00000137959:ENST00000450498:exon3:c.T635C:p.I212T,ENSG00000137959:ENST00000370751:exon4:c.T704C:p.I235T	NA	NA	1p31.1	NA	Name=Pol2-4H8	NA	NA	rs987495	0.21	0.21	0.2	0.214457	0.2505	0.245	0.2709	0.1195	0.2342	0.26	0.25	0.23	0.09	0.2367	0.28	0.62	T	0.0	B	0.0	B	0.070	N	1.000	P	-0.55	N	2.82	T	-0.978	T	0.003	T	0.026	-1.099	0.144	-5.64	-2.136	-1.687	4.079	-1.098806	NA	0.46	0.245465	0.144803	NA	0.341	NA	10.6006684
592	6	31238930	31238930	A	C	exonic	HLA-C	NA	nonsynonymous SNV	HLA-C:NM_001243042:exon3:c.T539G:p.L180R,HLA-C:NM_002117:exon3:c.T539G:p.L180R	exonic	ENSG00000204525	NA	nonsynonymous SNV	ENSG00000204525:ENST00000376228:exon3:c.T539G:p.L180R,ENSG00000204525:ENST00000383329:exon3:c.T539G:p.L180R	NA	NA	6p21.33	NA	Name=Pol2-4H8	NA	NA	rs79636386	0.3	0.3	0.181	0.371206	0.3857	0.372	0.3833	0.3396	0.3896	0.31	0.31	0.33	0.26	0.3478	0.33	0.54	T	0.035	B	0.04	B	0.000	N	1.000	P	-0.225	N	9.43	T	-0.986	T	0.000	T	0.641	-0.945	0.35	-5.62	-3.815	-5.015	0.750	-0.945417	NA	0.21	NA	NA	ID=COSM451200,COSM451199;OCCURENCE=1(breast)	0.065	NA	10.5998334
592	2	45169819	45169819	C	T	exonic	SIX3	NA	synonymous SNV	SIX3:NM_005413:exon1:c.C576T:p.R192R	exonic	ENSG00000138083	NA	synonymous SNV	ENSG00000138083:ENST00000260653:exon1:c.C576T:p.R192R	Score=756;Name=lod=1581	NA	2p21	Score=885;Name=V$NMYC_01	Name=SUZ12	Name=29	NA	rs182881	0.03	0.03	0.027	0.0267572	0.0258	0.003	0.013	0.053	0.0266	0.02	0.0035	0.02	0.07	0.0215	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.968779	NA	NA	0.021439	0.044643	NA	0.022	CLINSIG=non-pathogenic;CLNDBN=Holoprosencephaly_2;CLNREVSTAT=single;CLNACC=RCV000055687.1;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet;CLNDSDBID=NBK1530:C1834877:157170:ORPHA2162	10.5979276
592	11	2417935	2417935	T	C	exonic	CD81	NA	synonymous SNV	CD81:NM_004356:exon7:c.T639C:p.A213A	exonic	ENSG00000110651	NA	synonymous SNV	ENSG00000110651:ENST00000481687:exon5:c.T657C:p.A219A,ENSG00000110651:ENST00000263645:exon7:c.T639C:p.A213A,ENSG00000110651:ENST00000492252:exon7:c.T618C:p.A206A,ENSG00000110651:ENST00000492627:exon7:c.T426C:p.A142A,ENSG00000110651:ENST00000526072:exon7:c.T426C:p.A142A,ENSG00000110651:ENST00000527343:exon7:c.T606C:p.A202A,ENSG00000110651:ENST00000381036:exon8:c.T753C:p.A251A	NA	NA	11p15.5	Score=774;Name=V$YY1_02	NA	NA	NA	rs2229751	0.1	0.1	0.093	0.122005	0.0149	0.0317	0.0389	0.3797	0.0358	0.01	0.02	0.04	0.37	0.0437	0.37	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.961	T	0.000	T	.	1.213	9.923	-6.79	-2.053	-3.414	2.211	1.212674	NA	NA	0.011165	0.326975	NA	0.145	NA	10.5969016
592	2	73680508	73680508	G	C	exonic	ALMS1	NA	nonsynonymous SNV	ALMS1:NM_015120:exon8:c.G6851C:p.R2284P	exonic	ENSG00000116127	NA	nonsynonymous SNV	ENSG00000116127:ENST00000423048:exon1:c.G1685C:p.R562P,ENSG00000116127:ENST00000409009:exon7:c.G6725C:p.R2242P,ENSG00000116127:ENST00000264448:exon8:c.G6851C:p.R2284P,ENSG00000116127:ENST00000377715:exon8:c.G6851C:p.R2284P	Score=387;Name=lod=50	NA	2p13.1	NA	NA	NA	NA	rs6546839	0.34	0.34	0.351	0.364417	0.2276	0.0089	0.3919	0.8782	0.1575	0.23	0.01	0.35	0.86	0.2696	0.86	1	T	0.0	B	0.0	B	0.003	N	1.000	P	-1.525	N	3.65	T	-0.991	T	0.000	T	0.468	-0.08	3.609	5.49	1.481	2.660	12.855	-0.079949	NA	1	0.23945	0.741962	NA	0.435	NA	10.5966834
592	4	56874517	56874517	A	C	exonic	CEP135	NA	nonsynonymous SNV	CEP135:NM_025009:exon18:c.A2305C:p.I769L	exonic	ENSG00000174799	NA	nonsynonymous SNV	ENSG00000174799:ENST00000257287:exon18:c.A2305C:p.I769L	NA	NA	4q12	NA	NA	NA	NA	rs3214045	0.16	0.16	0.188	0.139177	0.2714	0.0913	0.1182	0.087	0.138	0.28	0.11	0.12	0.08	0.2095	0.28	0.32	T	0.0	B	0.0	B	0.580	N	0.957	P	-1.12	N	2.33	T	-0.903	T	0.000	T	0.013	-1.216	0.064	-6.14	-0.994	-1.014	7.631	-1.216297	NA	0.61	0.257269	0.120064	NA	0.145	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116668.2;CLNDSDB=.;CLNDSDBID=.	10.5951644
593	18	6997818	6997818	A	C	exonic	LAMA1	NA	nonsynonymous SNV	LAMA1:NM_005559:exon33:c.T4729G:p.S1577A	exonic	ENSG00000101680	NA	nonsynonymous SNV	ENSG00000101680:ENST00000389658:exon33:c.T4729G:p.S1577A	NA	NA	18p11.31	NA	NA	NA	NA	rs12961939	0.18	0.18	0.175	0.149561	0.2684	0.0575	0.1758	0.1513	0.1012	0.28	0.07	0.2	0.15	0.2025	0.28	0.56	T	0.364	B	0.161	B	0.003	N	1.000	P	1.995	M	2.72	T	-0.943	T	0.000	T	0.17	1.364	10.49	4.18	2.160	4.299	11.787	1.363916	1.363916	NA	0.268721	0.149342	NA	0.123	NA	10.5937124
593	11	4790268	4790268	C	A	exonic	OR51F1	NA	nonsynonymous SNV	OR51F1:NM_001004752:exon1:c.G880T:p.D294Y	exonic	ENSG00000188069	NA	nonsynonymous SNV	ENSG00000188069:ENST00000343430:exon1:c.G880T:p.D294Y,ENSG00000188069:ENST00000380383:exon1:c.G901T:p.D301Y	Score=397;Name=lod=55	NA	11p15.4	NA	NA	NA	NA	rs1030726	0.23	0.23	0.245	0.215655	0.2704	NA	0.2017	0.4569	0.0654	0.25	NA	0.23	0.46	0.218	0.46	1	T	0.0	B	0.0	B	0.000	N	0.000	P	-3.91	N	2.4	T	-0.908	T	0.000	T	0.12	-0.499	1.713	5.43	1.085	6.611	11.833	-0.498507	NA	1	0.253374	0.446842	NA	0.29	NA	10.5915594
593	13	103449202	103449202	T	C	exonic	KDELC1	NA	nonsynonymous SNV	KDELC1:NM_024089:exon2:c.A340G:p.I114V	exonic	ENSG00000134901	NA	nonsynonymous SNV	ENSG00000134901:ENST00000376004:exon2:c.A340G:p.I114V	Score=567;Name=lod=268	NA	13q33.1	NA	NA	NA	NA	rs1047740	0.43	0.43	0.444	0.417532	0.2316	0.4821	0.2752	0.7269	0.2249	0.24	0.53	0.28	0.72	0.2939	0.72	1	T	0.0	B	0.001	B	0.000	N	0.996	P	-1.245	N	-1.53	D	-0.937	T	0.000	T	0.032	-0.171	3.165	4.85	0.884	0.957	10.088	-0.171246	NA	1	0.22	0.652519	NA	0.37	NA	10.5878334
593	17	46847364	46847364	C	A	exonic	TTLL6	NA	nonsynonymous SNV	TTLL6:NM_173623:exon7:c.G1215T:p.E405D,TTLL6:NM_001130918:exon14:c.G2136T:p.E712D	exonic	ENSG00000170703	NA	nonsynonymous SNV	ENSG00000170703:ENST00000433608:exon7:c.G1215T:p.E405D,ENSG00000170703:ENST00000393382:exon14:c.G2136T:p.E712D	NA	NA	17q21.32	NA	NA	NA	NA	rs2032844	0.25	0.25	0.225	0.238219	0.2445	0.1736	0.3905	0.2602	0.1605	0.25	0.16	0.37	0.26	0.2531	0.37	0.09	T	0.999	D	0.994	D	0.000	N	1.000	P	1.845	L	.	.	-1.019	T	0.000	T	0.074	3.541	18.07	-3.84	-0.440	-1.741	5.684	3.541315	3.541315	0	0.249302	0.258057	NA	0.304	NA	10.5864314
593	22	38119213	38119213	G	A	exonic	TRIOBP	NA	nonsynonymous SNV	TRIOBP:NM_001039141:exon7:c.G650A:p.S217N	exonic	ENSG00000100106	NA	nonsynonymous SNV	ENSG00000100106:ENST00000406386:exon7:c.G650A:p.S217N	Score=243;Name=lod=13	NA	22q13.1	NA	NA	NA	NA	rs12628603	0.55	0.55	0.505	0.526558	0.5696	0.7073	0.611	0.3752	0.4407	0.56	0.66	0.6	0.39	0.5697	0.66	0.02	D	0.384	B	0.111	B	.	.	0.000	P	0.805	L	1.71	T	-0.982	T	0.000	T	0.074	2.213	13.36	3.16	1.910	3.006	6.973	2.21308	2.21308	0	0.608307	0.408401	NA	0.543	NA	10.5857264
593	7	23015831	23015831	T	C	exonic	FAM126A	NA	synonymous SNV	FAM126A:NM_032581:exon7:c.A624G:p.S208S	exonic	ENSG00000122591	NA	synonymous SNV	ENSG00000122591:ENST00000409923:exon7:c.A624G:p.S208S,ENSG00000122591:ENST00000432176:exon7:c.A624G:p.S208S	Score=461;Name=lod=100	NA	7p15.3	NA	NA	NA	NA	rs3735231	0.38	0.38	0.368	0.3748	0.3628	0.4663	0.33	0.3578	0.3476	0.36	0.47	0.36	0.31	0.3738	0.47	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.938	T	0.000	T	.	1.901	12.31	5.49	2.092	1.643	15.587	1.900832	1.900832	NA	0.344964	0.343622	NA	0.435	CLINSIG=non-pathogenic;CLNDBN=Hypomyelination_and_Congenital_Cataract;CLNREVSTAT=single;CLNACC=RCV000020929.2;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet;CLNDSDBID=NBK2587:C2674508:610532:ORPHA85163	10.5851026
594	7	82784456	82784456	A	G	exonic	PCLO	NA	nonsynonymous SNV	PCLO:NM_014510:exon2:c.T1501C:p.S501P,PCLO:NM_033026:exon2:c.T1501C:p.S501P	exonic	ENSG00000186472	NA	nonsynonymous SNV	ENSG00000186472:ENST00000333891:exon2:c.T1501C:p.S501P,ENSG00000186472:ENST00000423517:exon2:c.T1501C:p.S501P	NA	NA	7q21.11	Score=818;Name=V$PPARG_03	NA	NA	NA	rs6972461	0.16	0.16	0.141	0.147364	0.2704	0.005	0.183	0.1974	0.0746	0.25	0.01	0.18	0.18	0.2024	0.28	0	D	0.0	B	0.0	B	.	.	1.000	P	-0.35	N	2.38	T	-0.956	T	0.000	T	0.042	-2.268	0.004	-8.7	-5.602	-0.017	4.929	-2.268151	NA	0.51	0.27567	0.199177	NA	0.058	NA	10.5848634
594	1	35864571	35864571	A	G	exonic	ZMYM4	NA	synonymous SNV	ZMYM4:NM_005095:exon22:c.A3360G:p.Q1120Q	exonic	ENSG00000146463	NA	synonymous SNV	ENSG00000146463:ENST00000373297:exon20:c.A3093G:p.Q1031Q,ENSG00000146463:ENST00000314607:exon22:c.A3360G:p.Q1120Q	Score=630;Name=lod=484	NA	1p34.3	Score=711;Name=V$NRSF_01	NA	Name=11	NA	rs12040345	0.11	0.11	0.118	0.14397	0.0219	0.0923	0.0418	0.3623	0.1002	0.02	0.06	0.05	0.36	0.0498	0.36	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.948	T	0.000	T	.	0.928	8.779	3.17	0.889	0.366	6.190	0.927843	NA	NA	0.010465	0.276214	NA	0.094	NA	10.5845016
594	21	46057711	46057711	G	C	exonic	KRTAP10-10	NA	nonsynonymous SNV	KRTAP10-10:NM_181688:exon1:c.G377C:p.C126S	exonic	ENSG00000221859	NA	nonsynonymous SNV	ENSG00000221859:ENST00000380095:exon1:c.G377C:p.C126S	Score=376;Name=lod=45	NA	21q22.3	NA	NA	NA	NA	rs4818948	0.25	0.25	0.225	0.27516	0.2406	0.0526	0.2233	0.4781	0.3027	0.25	0.05	0.24	0.47	0.2571	0.47	0.16	T	0.157	B	0.114	B	.	.	0.000	P	3.295	M	4.88	T	-1.018	T	0.000	T	0.187	1.174	9.775	2.19	0.411	2.512	4.961	1.173863	NA	0.11	0.251744	0.448025	ID=COSM1130521;OCCURENCE=1(prostate)	0.13	NA	10.5838894
594	14	95912388	95912388	G	A	exonic	SYNE3	NA	nonsynonymous SNV	SYNE3:NM_152592:exon8:c.C1490T:p.T497M	exonic	ENSG00000176438	NA	nonsynonymous SNV	ENSG00000176438:ENST00000554873:exon4:c.C761T:p.T254M,ENSG00000176438:ENST00000334258:exon8:c.C1490T:p.T497M,ENSG00000176438:ENST00000553340:exon8:c.C1490T:p.T497M,ENSG00000176438:ENST00000557275:exon8:c.C1490T:p.T497M	NA	NA	14q32.13	NA	NA	NA	NA	rs61749972	0.06	0.06	0.057	0.0587061	0.0895	0.002	0.0605	0.0424	0.1063	0.09	0.0017	0.08	0.05	0.079	0.09	0.16	T	0.669	P	0.08	B	0.333	N	1.000	N	1.6	L	3.53	T	-0.986	T	0.001	T	0.131	2.167	13.2	3.12	1.239	0.954	4.667	2.166674	2.166674	0.27	0.085233	0.057195	NA	0.123	NA	10.5796004
594	5	89703641	89703641	C	G	exonic	CETN3	NA	nonsynonymous SNV	CETN3:NM_004365:exon2:c.G28C:p.V10L	exonic	ENSG00000153140	NA	nonsynonymous SNV	ENSG00000153140:ENST00000518458:exon1:c.G7C:p.V3L,ENSG00000153140:ENST00000283122:exon2:c.G28C:p.V10L,ENSG00000153140:ENST00000522083:exon2:c.G28C:p.V10L,ENSG00000153140:ENST00000522565:exon2:c.G28C:p.V10L,ENSG00000153140:ENST00000522842:exon2:c.G28C:p.V10L,ENSG00000153140:ENST00000522864:exon2:c.G28C:p.V10L	Score=673;Name=lod=722	NA	5q14.3	NA	Name=CEBPB	NA	NA	rs4873	0.18	0.18	0.172	0.185304	0.2565	0.2034	0.1585	0.0628	0.2781	0.25	0.2	0.17	0.04	0.2291	0.27	0.76	T	0.0	B	0.001	B	0.120	N	0.971	P	0	N	-0.13	T	-1.091	T	0.000	T	0.071	1.812	12.02	3.64	0.643	2.485	8.043	1.812032	1.812032	0.34	0.269383	0.093594	NA	0.145	NA	10.5783504
594	16	20638576	20638576	A	T	exonic	ACSM1	NA	synonymous SNV	ACSM1:NM_052956:exon10:c.T1362A:p.G454G	exonic;splicing	ENSG00000166743;ENSG00000166743	ENST00000519745:exon10:c.1195+2T>A	synonymous SNV	ENSG00000166743:ENST00000307493:exon10:c.T1362A:p.G454G,ENSG00000166743:ENST00000219151:exon11:c.T315A:p.G105G,ENSG00000166743:ENST00000520010:exon11:c.T1362A:p.G454G	NA	NA	16p12.3	Score=751;Name=V$HOX13_01	Name=JunD	NA	NA	rs1692729	0.58	0.58	0.607	0.605831	0.326	0.8512	0.3372	0.7844	0.59	0.34	0.88	0.36	0.76	0.4388	0.88	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-1.082	T	0.000	T	.	-1.945	0.007	-8.45	-2.291	-5.201	7.086	-1.945169	NA	NA	0.325233	0.73194	NA	0.565	NA	10.5766336
595	19	41512841	41512841	G	T	exonic	CYP2B6	NA	nonsynonymous SNV	CYP2B6:NM_000767:exon4:c.G516T:p.Q172H	exonic	ENSG00000197408	NA	nonsynonymous SNV	ENSG00000197408:ENST00000324071:exon4:c.G516T:p.Q172H	NA	NA	19q13.2	NA	NA	NA	NA	rs3745274	0.27	0.27	0.24	0.315695	0.2356	0.2153	0.3732	0.3744	0.3814	0.23	0.18	0.36	0.35	0.2732	0.37	0.12	T	0.001	B	0.005	B	0.000	N	1.000	P	0.53	N	-0.41	T	-1.034	T	0.000	T	0.07	0.704	7.755	-8.96	-1.641	-1.320	1.071	0.704176	NA	0.26	0.249767	0.369723	NA	0.239	CLINSIG=pathogenic|other;CLNDBN=Efavirenz\x2c_poor_metabolism_of|Efavirenz_central_nervous_system_toxicity\x2c_susceptibility_to;CLNREVSTAT=single|single;CLNACC=RCV000022520.23|RCV000022521.2;CLNDSDB=MedGen:OMIM|MedGen;CLNDSDBID=C3281153:614546|CN122725	10.5747664
595	12	4388084	4388084	C	G	exonic	CCND2	NA	synonymous SNV	CCND2:NM_001759:exon3:c.C570G:p.T190T	exonic	ENSG00000118971	NA	synonymous SNV	ENSG00000118971:ENST00000261254:exon3:c.C570G:p.T190T	Score=531;Name=lod=192	NA	12p13.32	NA	Name=Pol2,CEBPB,Pol2-4H8	Name=24	NA	rs3217805	0.25	0.25	0.251	0.219848	0.3787	0.0833	0.2781	0.1679	0.226	0.39	0.1	0.31	0.18	0.3226	0.39	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.937	T	0.000	T	.	-0.343	2.376	-7.54	-1.038	-0.106	2.657	-0.343256	NA	NA	0.392791	0.19655	NA	0.333	NA	10.5725756
595	2	241713646	241713646	A	G	exonic	KIF1A	NA	synonymous SNV	KIF1A:NM_004321:exon11:c.T991C:p.L331L,KIF1A:NM_001244008:exon12:c.T991C:p.L331L	exonic	ENSG00000130294	NA	synonymous SNV	ENSG00000130294:ENST00000404283:exon11:c.T991C:p.L331L,ENSG00000130294:ENST00000320389:exon12:c.T991C:p.L331L,ENSG00000130294:ENST00000498729:exon12:c.T991C:p.L331L	Score=555;Name=lod=241	NA	2q37.3	Score=807;Name=V$ARP1_01	NA	NA	NA	rs1063353	0.5	0.5	0.568	0.513578	0.3618	0.622	0.3631	0.7428	0.3548	0.36	0.61	0.32	0.72	0.3862	0.72	.	.	.	.	.	.	0.000	U	0.000	P	.	.	.	.	-0.957	T	0.000	T	.	0.266	5.44	4.33	0.820	6.463	12.066	0.266237	NA	NA	0.346616	0.650117	NA	0.652	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000117403.2;CLNDSDB=.;CLNDSDBID=.	10.5720506
595	19	35612159	35612159	C	G	exonic	FXYD3	NA	nonsynonymous SNV	FXYD3:NM_001136010:exon5:c.C107G:p.P36R,FXYD3:NM_001136009:exon6:c.C107G:p.P36R	exonic	ENSG00000089356	NA	nonsynonymous SNV	ENSG00000089356:ENST00000603449:exon4:c.C107G:p.P36R,ENSG00000089356:ENST00000454903:exon5:c.C107G:p.P36R,ENSG00000089356:ENST00000605552:exon5:c.C107G:p.P36R	NA	NA	19q13.12	NA	Name=BAF155	NA	NA	rs2290649	0.28	0.28	0.241	0.236821	0.2455	0.2798	0.415	0.1815	0.1319	0.25	0.33	0.38	0.21	0.2652	0.38	.	.	0.0	B	0.0	B	.	.	1.000	P	.	.	.	.	-0.980	T	0.000	T	0.004	-0.458	1.879	-8.32	-2.597	-1.795	4.253	-0.458439	NA	0	0.25314	0.198593	NA	0.312	NA	10.5694934
595	9	139929435	139929435	A	G	exonic	C9orf139	NA	nonsynonymous SNV	C9orf139:NM_207511:exon3:c.A502G:p.K168E	exonic	ENSG00000180539	NA	nonsynonymous SNV	ENSG00000180539:ENST00000314330:exon3:c.A502G:p.K168E	NA	NA	9q34.3	NA	Name=EBF,TBP,NFKB,IRF4_(M-17),BCL11A,EBF1_(C-8),BATF	Name=8	NA	rs12337910	0.08	0.08	0.082	0.0884585	0.1004	0.0337	0.0937	0.1604	0.0317	0.08	0.03	0.08	0.14	0.0804	0.18	0.87	T	0.612	P	0.181	B	.	.	1.000	P	0	N	0.56	T	-1.088	T	0.000	T	0.008	0.625	7.36	0.229	0.021	-2.228	2.346	0.624706	NA	NA	0.085797	0.179254	NA	0.203	NA	10.5667364
596	14	51225132	51225132	G	T	exonic	NIN	NA	synonymous SNV	NIN:NM_020921:exon18:c.C2616A:p.A872A,NIN:NM_182944:exon18:c.C2616A:p.A872A,NIN:NM_182946:exon18:c.C2616A:p.A872A	exonic	ENSG00000100503	NA	synonymous SNV	ENSG00000100503:ENST00000530997:exon16:c.C2616A:p.A872A,ENSG00000100503:ENST00000245441:exon18:c.C2616A:p.A872A,ENSG00000100503:ENST00000324330:exon18:c.C2616A:p.A872A,ENSG00000100503:ENST00000382041:exon18:c.C2616A:p.A872A,ENSG00000100503:ENST00000453196:exon18:c.C2616A:p.A872A,ENSG00000100503:ENST00000476352:exon18:c.C2616A:p.A872A	Score=369;Name=lod=42	NA	14q22.1	NA	NA	NA	NA	rs2073349	0.4	0.4	0.386	0.38758	0.3628	0.5099	0.4712	0.3033	0.3415	0.37	0.52	0.48	0.26	0.3775	0.52	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.886	T	0.000	T	.	0.627	7.37	4.85	2.756	2.971	16.768	0.62662	NA	NA	0.367791	0.288924	NA	0.29	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117798.2;CLNDSDB=.;CLNDSDBID=.	10.5585756
596	3	12859004	12859004	A	C	exonic	CAND2	NA	nonsynonymous SNV	CAND2:NM_012298:exon8:c.A2294C:p.H765P,CAND2:NM_001162499:exon10:c.A2573C:p.H858P	exonic	ENSG00000144712	NA	nonsynonymous SNV	ENSG00000144712:ENST00000295989:exon8:c.A2294C:p.H765P,ENSG00000144712:ENST00000456430:exon10:c.A2573C:p.H858P	Score=462;Name=lod=101	NA	3p25.2	Score=772;Name=V$PAX5_02	NA	NA	NA	rs3732678	0.57	0.57	0.609	0.572284	0.6382	0.2897	0.4755	0.9713	0.3252	0.62	0.26	0.46	0.94	0.542	0.94	0.29	T	0.0	B	0.0	B	0.204	N	0.000	P	-0.805	N	-0.11	T	-0.992	T	0.000	T	0.039	0.478	6.595	3.88	1.150	2.850	10.525	0.478073	NA	0.4	0.596667	0.905637	NA	0.659	NA	10.5564664
596	14	97321689	97321689	C	T	exonic	VRK1	NA	synonymous SNV	VRK1:NM_003384:exon8:c.C705T:p.G235G	exonic	ENSG00000100749	NA	synonymous SNV	ENSG00000100749:ENST00000216639:exon8:c.C705T:p.G235G	Score=551;Name=lod=232	NA	14q32.2	Score=810;Name=V$HMX1_01	NA	NA	NA	rs2230532	0.46	0.46	0.428	0.416733	0.3698	0.8442	0.4928	0.1649	0.3108	0.36	0.85	0.44	0.16	0.3892	0.85	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.060	T	0.000	T	.	1.05	9.288	-6.05	-1.420	-0.690	9.119	1.049864	NA	NA	0.351395	0.170903	NA	0.435	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118848.2;CLNDSDB=.;CLNDSDBID=.	10.5562716
597	3	196674749	196674749	C	T	exonic	PIGZ	NA	nonsynonymous SNV	PIGZ:NM_025163:exon3:c.G1019A:p.R340Q	exonic	ENSG00000119227	NA	nonsynonymous SNV	ENSG00000119227:ENST00000412723:exon3:c.G1019A:p.R340Q	Score=243;Name=lod=13	NA	3q29	Score=888;Name=V$RFX1_01	Name=CTCF,NRSF	NA	NA	rs4916589	0.65	0.65	0.674	0.632188	0.6034	0.7659	0.5692	0.6815	0.502	0.6	0.8	0.54	0.64	0.5911	0.8	0.61	T	0.0	B	0.0	B	0.103	N	0.002	P	-1.65	N	0.04	T	-0.954	T	0.000	T	0.046	-1.085	0.158	3.4	0.923	1.385	1.287	-1.08454	NA	NA	0.584478	0.652973	NA	0.529	NA	10.5543554
597	19	51957556	51957556	T	C	exonic	SIGLEC8	NA	nonsynonymous SNV	SIGLEC8:NM_014442:exon6:c.A1162G:p.R388G	exonic	ENSG00000105366	NA	nonsynonymous SNV	ENSG00000105366:ENST00000430817:exon4:c.A835G:p.R279G,ENSG00000105366:ENST00000340550:exon5:c.A883G:p.R295G,ENSG00000105366:ENST00000321424:exon6:c.A1162G:p.R388G	NA	NA	19q13.41	NA	NA	NA	NA	rs3829659	0.33	0.33	0.306	0.326877	0.2714	0.2321	0.255	0.5461	0.2362	0.29	0.24	0.3	0.53	0.2666	0.54	0.03	D	1.0	D	0.962	D	.	.	1.000	P	2.82	M	0.62	T	-0.968	T	0.000	T	0.036	1.608	11.33	-0.073	-0.079	-0.711	4.310	1.607566	1.607566	0.03	0.242907	0.536768	ID=COSM148699;OCCURENCE=1(stomach)	0.341	NA	10.5524264
597	20	42331457	42331457	A	G	exonic	MYBL2	NA	nonsynonymous SNV	MYBL2:NM_002466:exon8:c.A1279G:p.S427G	exonic	ENSG00000101057	NA	nonsynonymous SNV	ENSG00000101057:ENST00000396863:exon7:c.A1207G:p.S403G,ENSG00000101057:ENST00000217026:exon8:c.A1279G:p.S427G	Score=542;Name=lod=212	NA	20q13.12	NA	NA	NA	NA	rs2070235	0.15	0.15	0.165	0.15655	0.0885	0.1002	0.0807	0.3124	0.1278	0.09	0.12	0.08	0.33	0.108	0.33	0.41	T	0.78	P	0.192	B	0.019	N	0.480	P	0	N	2.53	T	-0.903	T	0.000	T	0.033	0.92	8.745	2.73	0.867	2.611	6.869	0.919897	NA	0.61	0.085814	0.282796	NA	0.138	NA	10.5510194
597	2	28827625	28827625	C	T	exonic	PLB1	NA	nonsynonymous SNV	PLB1:NM_001170585:exon40:c.C2927T:p.A976V,PLB1:NM_153021:exon41:c.C2960T:p.A987V	exonic	ENSG00000163803	NA	nonsynonymous SNV	ENSG00000163803:ENST00000444257:exon1:c.C32T:p.A11V,ENSG00000163803:ENST00000422425:exon40:c.C2927T:p.A976V,ENSG00000163803:ENST00000327757:exon41:c.C2960T:p.A987V	NA	NA	2p23.2	NA	NA	NA	NA	rs34289907	0.06	0.06	0.054	0.043131	0.1054	NA	0.0634	0.025	0.0337	0.11	NA	0.09	0.02	0.0733	0.11	0.1	T	0.966	D	0.513	P	0.289	N	0.000	P	1.905	M	0.5	T	-0.949	T	0.004	T	0.248	3.315	17.14	-5.37	-0.605	-0.209	8.837	3.31471	3.31471	0.16	0.107209	0.032229	NA	0.014	NA	10.5474244
597	6	144869785	144869785	A	G	exonic	UTRN	NA	nonsynonymous SNV	UTRN:NM_007124:exon46:c.A6605G:p.N2202S	exonic	ENSG00000152818	NA	nonsynonymous SNV	ENSG00000152818:ENST00000367545:exon46:c.A6605G:p.N2202S	NA	NA	6q24.2	NA	Name=GATA-2,Rad21,CTCF	Name=5	NA	rs1534443	0.36	0.36	0.357	0.373003	0.2515	0.5952	0.2147	0.3328	0.4356	0.24	0.62	0.24	0.33	0.3007	0.62	0.97	T	0.0	B	0.0	B	0.569	N	1.000	P	-0.205	N	0.34	T	-1.090	T	0.014	T	0.012	-0.427	2.009	-6.34	-1.221	-0.108	2.057	-0.427481	NA	0.89	0.234419	0.297549	NA	0.268	NA	10.5467144
597	7	143088867	143088867	T	C	exonic	EPHA1	NA	nonsynonymous SNV	EPHA1:NM_005232:exon17:c.A2698G:p.M900V	exonic	ENSG00000146904	NA	nonsynonymous SNV	ENSG00000146904:ENST00000275815:exon17:c.A2698G:p.M900V	Score=376;Name=lod=45	NA	7q34	Score=933;Name=V$TCF11_01	Name=Pol2-4H8	Name=77	NA	rs6967117	0.95	0.95	0.945	0.960264	0.9245	1	0.9798	0.9198	0.9969	0.91	1	0.98	0.93	0.9366	1	1	T	0.0	B	0.0	B	0.017	N	1.000	P	-1.955	N	0.14	T	-0.961	T	0.000	T	0.056	-1.962	0.007	3.78	0.704	1.959	8.653	-1.962456	NA	1	0.926047	0.916704	NA	0.913	NA	10.5461864
597	11	125891162	125891162	A	G	exonic	CDON	NA	synonymous SNV	CDON:NM_001243597:exon3:c.T330C:p.P110P,CDON:NM_016952:exon3:c.T330C:p.P110P	exonic	ENSG00000064309	NA	synonymous SNV	ENSG00000064309:ENST00000263577:exon3:c.T330C:p.P110P,ENSG00000064309:ENST00000392693:exon3:c.T330C:p.P110P,ENSG00000064309:ENST00000527967:exon3:c.T330C:p.P110P,ENSG00000064309:ENST00000531586:exon3:c.T330C:p.P110P,ENSG00000064309:ENST00000534818:exon3:c.T330C:p.P110P	Score=304;Name=lod=23	NA	11q24.2	Score=776;Name=V$PAX5_01	NA	NA	NA	rs35131477	0.02	0.02	0.015	0.0263578	0.0368	0.005	0.0331	0.0144	0.0491	0.04	0.01	0.04	0.01	0.0371	0.048	.	.	.	.	.	.	.	.	1.000	D	.	.	.	.	-1.078	T	0.025	T	.	-0.562	1.462	-0.615	-0.126	-0.611	3.771	-0.562135	NA	NA	0.047453	0.027033	NA	0.072	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000081796.1;CLNDSDB=.;CLNDSDBID=.	10.5453136
598	6	42906384	42906384	G	T	exonic	CNPY3	NA	nonsynonymous SNV	CNPY3:NM_006586:exon6:c.G692T:p.S231I	exonic	ENSG00000137161	NA	nonsynonymous SNV	ENSG00000137161:ENST00000372836:exon6:c.G692T:p.S231I	Score=553;Name=lod=236	NA	6p21.1	NA	NA	NA	NA	rs9471969	0.21	0.21	0.206	0.213858	0.2744	0.0149	0.2075	0.3328	0.2004	0.28	0.02	0.22	0.32	0.2603	0.32	0.17	T	0.38	B	0.085	B	0.029	N	0.000	P	0	N	1.84	T	-1.043	T	0.017	T	0.134	3.15	16.53	5.02	2.504	4.641	15.613	3.149626	3.149626	0.22	0.255757	0.322061	NA	0.246	NA	10.5428764
598	5	55407542	55407542	C	T	exonic	ANKRD55	NA	nonsynonymous SNV	ANKRD55:NM_024669:exon10:c.G1033A:p.V345M	exonic	ENSG00000164512	NA	nonsynonymous SNV	ENSG00000164512:ENST00000434982:exon2:c.G169A:p.V57M,ENSG00000164512:ENST00000504958:exon8:c.G904A:p.V302M,ENSG00000164512:ENST00000341048:exon10:c.G1033A:p.V345M	Score=495;Name=lod=137	NA	5q11.2	NA	Name=JunD	NA	NA	rs321776	0.22	0.22	0.205	0.207867	0.2803	0.2927	0.1254	0.0658	0.2965	0.28	0.31	0.17	0.06	0.243	0.31	0.35	T	0.003	B	0.001	B	0.000	N	0.007	P	-0.345	N	1.57	T	-0.942	T	0.000	T	0.068	-1.993	0.007	-3.45	-1.167	-0.316	13.739	-1.993416	NA	1	0.268953	0.09714	NA	0.116	NA	10.5410804
598	12	427575	427575	A	G	exonic	KDM5A	NA	nonsynonymous SNV	KDM5A:NM_001042603:exon19:c.T2594C:p.M865T	exonic	ENSG00000073614	NA	nonsynonymous SNV	ENSG00000073614:ENST00000544760:exon10:c.T1451C:p.M484T,ENSG00000073614:ENST00000382815:exon19:c.T2594C:p.M865T,ENSG00000073614:ENST00000399788:exon19:c.T2594C:p.M865T	Score=585;Name=lod=319	NA	12p13.33	Score=805;Name=V$PBX1_02	NA	NA	NA	rs11062385	0.35	0.35	0.335	0.353035	0.2326	0.5109	0.3199	0.3321	0.3661	0.24	0.51	0.32	0.37	0.3102	0.51	0.42	T	0.001	B	0.004	B	0.002	N	0.520	P	-0.695	N	1.05	T	-0.915	T	0.000	T	0.237	0.477	6.591	3.99	0.760	3.908	6.180	0.477457	NA	0.51	0.253773	0.316694	NA	0.29	NA	10.5367604
598	7	100373077	100373077	C	G	exonic	ZAN	NA	unknown	UNKNOWN	exonic	ENSG00000146839	NA	nonsynonymous SNV	ENSG00000146839:ENST00000538115:exon32:c.C5904G:p.F1968L,ENSG00000146839:ENST00000542585:exon32:c.C5904G:p.F1968L,ENSG00000146839:ENST00000546213:exon32:c.C1437G:p.F479L,ENSG00000146839:ENST00000546292:exon32:c.C5904G:p.F1968L	Score=378;Name=lod=46	NA	7q22.1	NA	NA	NA	NA	rs542137	0.47	0.47	0.416	0.445288	0.3419	0.7867	0.5418	0.2133	0.4448	0.35	0.82	0.52	0.21	0.4252	0.82	0.27	T	0.95	P	0.629	P	0.011	N	0.990	P	.	.	2.5	T	-1.137	T	0.000	T	0.428	1.947	12.47	4.26	2.303	1.241	12.873	1.947026	1.947026	NA	0.363288	0.223587	NA	0.297	NA	10.5362787
599	1	95330372	95330372	G	A	exonic	SLC44A3	NA	nonsynonymous SNV	SLC44A3:NM_001258342:exon10:c.G1204A:p.V402I,SLC44A3:NM_001258343:exon10:c.G1108A:p.V370I,SLC44A3:NM_152369:exon10:c.G1168A:p.V390I,SLC44A3:NM_001114106:exon11:c.G1312A:p.V438I,SLC44A3:NM_001258340:exon11:c.G1312A:p.V438I,SLC44A3:NM_001258341:exon11:c.G1216A:p.V406I	exonic	ENSG00000143036	NA	nonsynonymous SNV	ENSG00000143036:ENST00000446120:exon10:c.G1204A:p.V402I,ENSG00000143036:ENST00000467909:exon10:c.G1168A:p.V390I,ENSG00000143036:ENST00000527077:exon10:c.G1108A:p.V370I,ENSG00000143036:ENST00000532427:exon10:c.G1072A:p.V358I,ENSG00000143036:ENST00000271227:exon11:c.G1312A:p.V438I,ENSG00000143036:ENST00000529450:exon11:c.G1216A:p.V406I	NA	NA	1p21.3	NA	Name=GR	Name=51	NA	rs859098	0.78	0.78	0.759	0.754593	0.7813	0.9831	0.8141	0.4841	0.8149	0.78	0.99	0.82	0.52	0.7701	0.99	0.09	T	0.848	P	0.366	B	0.027	N	1.000	P	1.87	L	2.26	T	-1.103	T	0.030	T	0.056	1.269	10.14	5.63	2.644	3.330	13.912	1.269144	1.269144	0.08	0.747326	0.547662	NA	0.652	NA	10.5346074
599	17	27286851	27286851	T	C	exonic	SEZ6	NA	nonsynonymous SNV	SEZ6:NM_001098635:exon8:c.A1636G:p.T546A,SEZ6:NM_178860:exon8:c.A1636G:p.T546A	exonic	ENSG00000063015	NA	nonsynonymous SNV	ENSG00000063015:ENST00000540632:exon7:c.A1414G:p.T472A,ENSG00000063015:ENST00000317338:exon8:c.A1636G:p.T546A,ENSG00000063015:ENST00000360295:exon8:c.A1636G:p.T546A,ENSG00000063015:ENST00000442608:exon8:c.A1636G:p.T546A	Score=590;Name=lod=333	NA	17q11.2	NA	NA	NA	NA	rs1976165	0.31	0.31	0.297	0.360423	0.2525	0.244	0.317	0.4977	0.4366	0.23	0.25	0.31	0.49	0.2953	0.49	0.27	T	0.0	B	0.0	B	0.000	N	0.000	P	1.04	L	-0.06	T	-0.940	T	0.000	T	0.131	1.848	12.14	5.07	1.281	5.780	11.883	1.84811	1.84811	0.85	0.254953	0.428845	NA	0.406	NA	10.5305804
599	1	196642233	196642233	G	A	exonic	CFH	NA	nonsynonymous SNV	CFH:NM_000186:exon2:c.G184A:p.V62I,CFH:NM_001014975:exon2:c.G184A:p.V62I	exonic	ENSG00000000971	NA	nonsynonymous SNV	ENSG00000000971:ENST00000359637:exon2:c.G184A:p.V62I,ENSG00000000971:ENST00000367429:exon2:c.G184A:p.V62I,ENSG00000000971:ENST00000439155:exon2:c.G184A:p.V62I	NA	Name=Circulating myeloperoxidase levels (serum)	1q31.3	NA	NA	NA	NA	rs800292	0.43	0.43	0.435	0.468051	0.2604	0.4067	0.4193	0.7912	0.3425	0.26	0.41	0.38	0.78	0.321	0.78	0.3	T	0.0	B	0.0	B	.	.	1.000	P	-2.42	N	-0.09	T	-0.942	T	0.000	T	0.082	-0.457	1.885	5.12	0.801	1.734	7.815	-0.456897	NA	1	0.221977	0.707898	ID=COSM146716;OCCURENCE=1(stomach)	0.478	CLINSIG=other;CLNDBN=Age-related_macular_degeneration_4;CLNREVSTAT=single;CLNACC=RCV000018017.1;CLNDSDB=MedGen:OMIM;CLNDSDBID=C1853147:610698	10.5299564
600	10	88277457	88277457	C	T	exonic	WAPAL	NA	nonsynonymous SNV	WAPAL:NM_015045:exon2:c.G370A:p.V124I	exonic	ENSG00000062650	NA	nonsynonymous SNV	ENSG00000062650:ENST00000298767:exon2:c.G370A:p.V124I	Score=536;Name=lod=201	NA	10q23.2	Score=913;Name=V$TCF11_01	NA	Name=4	NA	rs10887621	0.18	0.18	0.16	0.192492	0.2803	0.1776	0.1239	0.0643	0.3395	0.28	0.17	0.13	0.08	0.2475	0.28	0.08	T	0.06	B	0.02	B	0.524	N	0.056	P	0	N	1.96	T	-0.951	T	0.000	T	0.01	0.904	8.675	1.12	0.323	1.529	10.075	0.90375	NA	0.08	0.282093	0.104857	NA	0.145	NA	10.5234404
600	11	7817852	7817852	C	G	exonic	OR5P2	NA	nonsynonymous SNV	OR5P2:NM_153444:exon1:c.G638C:p.C213S	exonic	ENSG00000183303	NA	nonsynonymous SNV	ENSG00000183303:ENST00000329434:exon1:c.G638C:p.C213S	Score=317;Name=lod=26	NA	11p15.4	NA	NA	NA	NA	rs76615008	0.27	0.27	0.257	0.236621	0.2763	0.128	0.2911	0.3472	0.1196	0.29	0.15	0.28	0.37	0.2552	0.37	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-3.99	N	1.33	T	-0.903	T	0.000	T	0.079	-0.573	1.419	5.5	1.580	3.226	14.363	-0.573385	NA	1	0.282386	0.325736	NA	0.261	NA	10.5194474
600	2	8871342	8871342	C	A	exonic	KIDINS220	NA	nonsynonymous SNV	KIDINS220:NM_020738:exon30:c.G4824T:p.Q1608H	exonic	ENSG00000134313	NA	nonsynonymous SNV	ENSG00000134313:ENST00000418530:exon28:c.G4527T:p.Q1509H,ENSG00000134313:ENST00000427284:exon29:c.G4767T:p.Q1589H,ENSG00000134313:ENST00000473731:exon29:c.G4767T:p.Q1589H,ENSG00000134313:ENST00000256707:exon30:c.G4824T:p.Q1608H	Score=304;Name=lod=23	NA	2p25.1	NA	NA	Name=3	NA	rs1044280	0.23	0.23	0.245	0.235024	0.2893	0.1637	0.2435	0.2368	0.2444	0.3	0.16	0.23	0.22	0.2626	0.3	0.07	T	0.002	B	0.009	B	0.006	N	0.000	P	0.895	L	-0.29	T	-1.054	T	0.000	T	0.063	1.714	11.69	2.88	1.481	-0.047	9.766	1.714197	1.714197	0.05	0.26329	0.21824	NA	0.377	NA	10.5181434
600	11	7818056	7818056	T	C	exonic	OR5P2	NA	nonsynonymous SNV	OR5P2:NM_153444:exon1:c.A434G:p.Y145C	exonic	ENSG00000183303	NA	nonsynonymous SNV	ENSG00000183303:ENST00000329434:exon1:c.A434G:p.Y145C	NA	NA	11p15.4	NA	NA	NA	NA	rs73406604	0.27	0.27	0.262	0.236422	0.2763	0.128	0.2911	0.3472	0.1186	0.29	0.15	0.28	0.37	0.2572	0.37	0.02	D	0.023	B	0.169	B	0.000	D	1.000	P	2.095	M	1.15	T	-0.991	T	0.000	T	0.261	0.266	5.438	3.18	0.511	0.078	4.477	0.265978	NA	0	0.282502	0.326108	ID=COSM1559363;OCCURENCE=1(central_nervous_system)	0.261	NA	10.5173314
600	11	59623378	59623378	C	A	exonic	TCN1	NA	nonsynonymous SNV	TCN1:NM_001062:exon6:c.G901T:p.D301Y	exonic	ENSG00000134827	NA	nonsynonymous SNV	ENSG00000134827:ENST00000257264:exon6:c.G901T:p.D301Y	Score=376;Name=lod=45	NA	11q12.1	NA	NA	NA	NA	rs34324219	0.07	0.07	0.065	0.0523163	0.1153	NA	0.0663	0.0454	0.0409	0.13	NA	0.08	0.05	0.0874	0.13	0.01	D	0.795	P	0.437	B	0.009	N	1.000	N	2.51	M	0.74	T	-1.098	T	0.002	T	0.196	2.178	13.24	1.77	0.072	-0.220	3.586	2.178076	2.178076	0	0.114668	0.068832	ID=COSM1579601;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.043	NA	10.5159654
600	10	115609915	115609915	C	G	exonic	DCLRE1A	NA	nonsynonymous SNV	DCLRE1A:NM_014881:exon2:c.G949C:p.D317H,DCLRE1A:NM_001271816:exon3:c.G949C:p.D317H	exonic	ENSG00000198924	NA	nonsynonymous SNV	ENSG00000198924:ENST00000361384:exon2:c.G949C:p.D317H,ENSG00000198924:ENST00000369305:exon3:c.G949C:p.D317H	Score=317;Name=lod=26	NA	10q25.3	Score=862;Name=V$BACH2_01	NA	NA	NA	rs3750898	0.7	0.7	0.651	0.657748	0.7942	0.8185	0.817	0.3086	0.7106	0.78	0.83	0.81	0.35	0.7562	0.83	0.07	T	0.993	D	0.72	P	0.656	N	0.936	P	1.79	L	-0.29	T	-1.003	T	0.000	T	0.078	3.705	18.82	4.13	1.517	0.905	10.130	3.704827	3.704827	0.02	0.767791	0.384249	NA	0.659	NA	10.5151424
601	21	31587793	31587793	A	G	exonic	CLDN8	NA	nonsynonymous SNV	CLDN8:NM_199328:exon1:c.T451C:p.S151P	exonic	ENSG00000156284	NA	nonsynonymous SNV	ENSG00000156284:ENST00000286809:exon1:c.T451C:p.S151P,ENSG00000156284:ENST00000399899:exon1:c.T451C:p.S151P	Score=540;Name=lod=208	NA	21q22.11	NA	NA	NA	NA	rs686364	0.4	0.4	0.445	0.41873	0.2773	0.4484	0.2651	0.7216	0.2331	0.26	0.42	0.28	0.69	0.2974	0.69	1	T	0.0	B	0.0	B	0.000	N	0.999	P	-2.91	N	-2.42	D	-0.903	T	0.000	T	0.07	-1.43	0.021	3.96	0.776	7.728	11.447	-1.42969	NA	1	0.243953	0.658193	NA	0.478	NA	10.5146804
601	8	99030280	99030280	T	C	exonic	MATN2	NA	synonymous SNV	MATN2:NM_002380:exon12:c.T1755C:p.D585D,MATN2:NM_030583:exon12:c.T1755C:p.D585D	exonic	ENSG00000132561	NA	synonymous SNV	ENSG00000132561:ENST00000520016:exon11:c.T1755C:p.D585D,ENSG00000132561:ENST00000522025:exon11:c.T903C:p.D301D,ENSG00000132561:ENST00000524308:exon11:c.T1632C:p.D544D,ENSG00000132561:ENST00000254898:exon12:c.T1755C:p.D585D,ENSG00000132561:ENST00000521689:exon12:c.T1755C:p.D585D	NA	NA	8q22.2	Score=801;Name=V$PAX3_01	Name=E2F6_(H-50)	Name=4	NA	rs2248014	0.67	0.67	0.669	0.654752	0.7167	0.4325	0.7435	0.8404	0.5061	0.73	0.41	0.72	0.85	0.6787	0.85	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	.	.	.	.	.	-1.06	0.184	-7.86	-1.622	-5.375	2.155	-1.059806	NA	NA	0.757106	0.843095	NA	0.761	NA	10.5141606
601	19	6904137	6904137	C	T	exonic	EMR1	NA	nonsynonymous SNV	EMR1:NM_001256254:exon5:c.C470T:p.A157V,EMR1:NM_001256252:exon7:c.C737T:p.A246V,EMR1:NM_001256253:exon8:c.C893T:p.A298V,EMR1:NM_001974:exon8:c.C893T:p.A298V	exonic	ENSG00000174837	NA	nonsynonymous SNV	ENSG00000174837:ENST00000381407:exon5:c.C470T:p.A157V,ENSG00000174837:ENST00000381404:exon7:c.C737T:p.A246V,ENSG00000174837:ENST00000250572:exon8:c.C893T:p.A298V,ENSG00000174837:ENST00000312053:exon8:c.C893T:p.A298V	NA	NA	19p13.2	NA	NA	NA	NA	rs370094	0.42	0.42	0.433	0.432708	0.2396	0.4554	0.4193	0.6664	0.3016	0.24	0.49	0.38	0.65	0.3229	0.65	0.1	T	0.001	B	0.006	B	.	.	1.000	P	0.615	N	-3.01	D	-1.044	T	0.000	T	0.026	-0.301	2.567	-7.78	-3.955	-2.439	3.682	-0.300602	NA	0.27	0.257209	0.588743	NA	0.428	NA	10.5136244
601	11	120175749	120175749	A	G	exonic	POU2F3	NA	nonsynonymous SNV	POU2F3:NM_001244682:exon7:c.A461G:p.H154R,POU2F3:NM_014352:exon7:c.A455G:p.H152R	exonic	ENSG00000137709	NA	nonsynonymous SNV	ENSG00000137709:ENST00000260264:exon7:c.A461G:p.H154R,ENSG00000137709:ENST00000543440:exon7:c.A455G:p.H152R	Score=399;Name=lod=56	NA	11q23.3	NA	NA	NA	NA	rs7110845	0.76	0.76	0.78	0.830272	0.5567	0.9405	0.7104	0.9682	0.8967	0.56	0.94	0.65	0.95	0.6878	0.95	1	T	0.0	B	0.0	B	0.000	N	0.000	P	-1.32	N	-1.51	D	-0.936	T	0.000	T	0.044	0.852	8.445	6.17	1.644	7.551	15.859	0.851801	NA	1	0.575599	0.891512	NA	0.877	NA	10.5132344
601	8	23423669	23423669	A	G	exonic	SLC25A37	NA	nonsynonymous SNV	SLC25A37:NM_016612:exon2:c.A259G:p.I87V	exonic	ENSG00000147454	NA	nonsynonymous SNV	ENSG00000147454:ENST00000290075:exon2:c.A259G:p.I87V,ENSG00000147454:ENST00000417331:exon2:c.A259G:p.I87V,ENSG00000147454:ENST00000519973:exon2:c.A259G:p.I87V,ENSG00000147454:ENST00000523930:exon2:c.A202G:p.I68V	Score=259;Name=lod=15	NA	8p21.2	Score=827;Name=V$FREAC3_01	NA	NA	NA	rs2942194	0.2	0.2	0.174	0.173123	0.2922	0.2163	0.2421	0.0197	0.1646	0.28	0.2	0.28	0.02	0.2538	0.28	1	T	0.0	B	0.003	B	0.000	N	0.190	P	-0.47	N	-1.26	T	-1.066	T	0.000	T	0.097	0.156	4.84	3.49	0.457	4.460	5.027	0.156136	NA	0.84	0.276492	0.059701	NA	0.174	NA	10.5108414
601	5	95236459	95236459	C	T	exonic	ELL2	NA	nonsynonymous SNV	ELL2:NM_012081:exon7:c.G892A:p.A298T	exonic	ENSG00000118985	NA	nonsynonymous SNV	ENSG00000118985:ENST00000513343:exon4:c.G346A:p.A116T,ENSG00000118985:ENST00000237853:exon7:c.G892A:p.A298T	Score=558;Name=lod=247	NA	5q15	NA	NA	NA	NA	rs3815768	0.33	0.33	0.323	0.341653	0.2803	0.4325	0.2392	0.3699	0.3456	0.29	0.43	0.23	0.35	0.2822	0.43	1	T	0.0	B	0.003	B	0.001	N	0.000	P	-1.555	N	2.06	T	-0.919	T	0.000	T	0.123	1.217	9.94	3.65	1.374	1.128	4.893	1.21735	NA	0.63	0.261395	0.349069	NA	0.377	NA	10.5094384
601	17	72588806	72588806	C	A	exonic	C17orf77	NA	stopgain	C17orf77:NM_152460:exon3:c.C621A:p.C207X	exonic	ENSG00000182352	NA	stopgain	ENSG00000182352:ENST00000328023:exon2:c.C621A:p.C207X,ENSG00000182352:ENST00000392620:exon3:c.C621A:p.C207X	NA	NA	17q25.1	NA	NA	Name=6	NA	rs545652	0.21	0.21	0.227	0.223642	0.1392	0.0476	0.1441	0.5189	0.1493	0.14	0.04	0.19	0.52	0.1788	0.52	.	.	.	.	.	.	.	.	0.895	P	.	.	.	.	.	.	.	.	.	4.352	22.9	2.38	1.642	-0.036	8.346	4.351629	4.351629	NA	0.172674	0.446891	NA	0.225	NA	10.509326
601	2	218683154	218683154	A	G	exonic	TNS1	NA	nonsynonymous SNV	TNS1:NM_022648:exon24:c.T3589C:p.W1197R	exonic	ENSG00000079308	NA	nonsynonymous SNV	ENSG00000079308:ENST00000446688:exon6:c.T1003C:p.W335R,ENSG00000079308:ENST00000430930:exon21:c.T3526C:p.W1176R,ENSG00000079308:ENST00000419504:exon22:c.T3550C:p.W1184R,ENSG00000079308:ENST00000171887:exon24:c.T3589C:p.W1197R	Score=397;Name=lod=55	Name=Pulmonary function,Pulmonary function (interaction)	2q35	Score=927;Name=V$AP2_Q6	NA	NA	NA	rs2571445	0.66	0.66	0.654	0.658946	0.5905	0.621	0.6167	0.8351	0.5603	0.6	0.62	0.64	0.82	0.6196	0.82	0.82	T	0.0	B	0.0	B	0.043	N	0.000	P	-1.355	N	2.52	T	-0.945	T	0.000	T	0.087	-1.21	0.067	3.71	0.552	1.368	7.287	-1.21036	NA	1	0.614419	0.80118	NA	0.674	NA	10.5088144
601	10	133761285	133761285	G	A	exonic	PPP2R2D	NA	unknown	UNKNOWN	exonic	ENSG00000175470	NA	nonsynonymous SNV	ENSG00000175470:ENST00000455566:exon6:c.G979A:p.G327S	Score=581;Name=lod=305	NA	10q26.3	NA	NA	NA	NA	rs34473884	0.16	0.16	0.146	0.184105	0.2068	0.1607	0.2392	0.0817	0.2843	0.2	0.17	0.21	0.05	0.2196	0.23	0.03	D	0.868	P	0.39	B	0.000	N	0.000	P	.	.	1.67	T	-1.042	T	0.000	T	0.693	3.015	16.06	2.58	0.820	8.740	10.560	3.015017	3.015017	0.03	0.234173	0.10019	NA	0.203	NA	10.5060937
602	11	59224885	59224885	G	C	exonic	OR4D6	NA	nonsynonymous SNV	OR4D6:NM_001004708:exon1:c.G452C:p.S151T	exonic	ENSG00000166884	NA	nonsynonymous SNV	ENSG00000166884:ENST00000300127:exon1:c.G452C:p.S151T	NA	NA	11q12.1	Score=806;Name=V$RREB1_01	NA	NA	NA	rs1453542	0.21	0.21	0.192	0.177316	0.2793	0.1746	0.2305	0.0477	0.2127	0.29	0.2	0.26	0.06	0.2554	0.3	0	D	0.022	B	0.088	B	0.055	N	1.000	P	0.49	N	1.24	T	-1.008	T	0.000	T	0.055	1.928	12.41	5.04	2.846	-0.059	15.506	1.928327	1.928327	0.01	0.295693	0.074739	NA	0.13	NA	10.5029404
602	3	98217178	98217178	T	A	exonic	OR5K2	NA	stopgain	OR5K2:NM_001004737:exon1:c.T654A:p.Y218X	exonic	ENSG00000231861	NA	stopgain	ENSG00000231861:ENST00000427338:exon1:c.T654A:p.Y218X	NA	NA	3q11.2	Score=899;Name=V$EVI1_05	NA	NA	NA	rs55639376	0.13	0.13	0.114	0.123802	0.16	0.0526	0.1412	0.1422	0.1227	0.15	0.07	0.17	0.13	0.154	0.18	1	T	.	.	.	.	0.002	N	0.000	P	.	.	.	.	.	.	.	.	.	1.357	10.46	-2.78	-0.629	-2.229	9.443	1.356721	1.356721	0	0.18388	0.13527	NA	0.145	NA	10.50212
602	22	42276742	42276742	G	C	exonic	SREBF2	NA	nonsynonymous SNV	SREBF2:NM_004599:exon10:c.G1784C:p.G595A	exonic	ENSG00000198911	NA	nonsynonymous SNV	ENSG00000198911:ENST00000361204:exon10:c.G1784C:p.G595A	NA	NA	22q13.2	Score=829;Name=V$COMP1_01	NA	NA	NA	rs2228314	0.37	0.37	0.371	0.405751	0.2316	0.2004	0.5893	0.6165	0.3814	0.22	0.23	0.54	0.62	0.3339	0.62	0.88	T	0.0	B	0.0	B	0.058	N	1.000	P	-0.55	N	2.24	T	-0.968	T	0.000	T	0.023	0.249	5.347	4.95	1.094	1.148	6.559	0.249403	NA	1	0.266047	0.570813	NA	0.42	NA	10.5017864
602	19	9060541	9060541	C	T	exonic	MUC16	NA	nonsynonymous SNV	MUC16:NM_024690:exon3:c.G26905A:p.V8969M	exonic	ENSG00000181143	NA	nonsynonymous SNV	ENSG00000181143:ENST00000397910:exon3:c.G26905A:p.V8969M	NA	NA	19p13.2	NA	NA	NA	NA	rs11882256	0.4	0.4	0.395	0.391773	0.2525	0.5933	0.4712	0.3427	0.3374	0.26	0.65	0.42	0.32	0.3219	0.65	0	D	0.001	B	0.002	B	.	.	.	.	0.69	N	2.04	T	-0.963	T	0.000	T	0.036	-0.37	2.257	-5.24	-3.677	-7.589	3.185	-0.370133	NA	0.03	0.260552	0.321752	NA	0.384	NA	10.4983814
602	2	171070912	171070912	T	C	exonic	MYO3B	NA	synonymous SNV	MYO3B:NM_001083615:exon4:c.T345C:p.T115T,MYO3B:NM_138995:exon4:c.T345C:p.T115T	exonic	ENSG00000071909	NA	synonymous SNV	ENSG00000071909:ENST00000317935:exon4:c.T345C:p.T115T,ENSG00000071909:ENST00000334231:exon4:c.T372C:p.T124T,ENSG00000071909:ENST00000408978:exon4:c.T345C:p.T115T,ENSG00000071909:ENST00000409044:exon4:c.T345C:p.T115T,ENSG00000071909:ENST00000484338:exon4:c.T372C:p.T124T	NA	NA	2q31.1	Score=854;Name=V$ZID_01	Name=Pbx3,YY1_(C-20)	Name=5	NA	rs13385825	0.41	0.41	0.402	0.417732	0.3787	0.4494	0.33	0.447	0.4479	0.38	0.46	0.39	0.4	0.4046	0.46	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	0.959	8.911	-11.0	-3.781	-3.150	3.259	0.958801	NA	NA	0.388022	0.409553	NA	0.261	NA	10.4953446
603	22	31998612	31998612	G	A	exonic	SFI1	NA	nonsynonymous SNV	SFI1:NM_001258325:exon15:c.G1481A:p.R494Q,SFI1:NM_001258326:exon15:c.G1400A:p.R467Q,SFI1:NM_001258327:exon15:c.G1400A:p.R467Q,SFI1:NM_014775:exon16:c.G1553A:p.R518Q,SFI1:NM_001007467:exon17:c.G1646A:p.R549Q	exonic	ENSG00000198089	NA	nonsynonymous SNV	ENSG00000198089:ENST00000417682:exon6:c.G491A:p.R164Q,ENSG00000198089:ENST00000414585:exon13:c.G1187A:p.R396Q,ENSG00000198089:ENST00000443011:exon13:c.G1187A:p.R396Q,ENSG00000198089:ENST00000400289:exon15:c.G1400A:p.R467Q,ENSG00000198089:ENST00000443326:exon15:c.G1400A:p.R467Q,ENSG00000198089:ENST00000540643:exon15:c.G1481A:p.R494Q,ENSG00000198089:ENST00000432498:exon16:c.G1553A:p.R518Q,ENSG00000198089:ENST00000400288:exon17:c.G1646A:p.R549Q	Score=251;Name=lod=14	NA	22q12.2	NA	Name=c-Fos,p300	Name=106	NA	rs2006771	0.35	0.35	0.356	0.351837	0.4612	0.12	0.3847	0.4138	0.3712	0.45	0.12	0.42	0.41	0.4146	0.46	0.65	T	0.733	P	0.117	B	0.726	N	1.000	P	0	N	1.59	T	-0.952	T	0.000	T	0.231	1.425	10.7	-3.74	-0.393	-0.421	11.677	1.424511	1.424511	0.42	0.463806	0.420253	NA	0.384	NA	10.4937274
603	3	135720540	135720540	A	G	exonic	PPP2R3A	NA	nonsynonymous SNV	PPP2R3A:NM_002718:exon2:c.A200G:p.D67G	exonic	ENSG00000073711	NA	nonsynonymous SNV	ENSG00000073711:ENST00000264977:exon2:c.A200G:p.D67G	NA	NA	3q22.3	NA	NA	NA	NA	rs9814557	0.14	0.14	0.131	0.142372	0.2773	0.0268	0.1369	0.0567	0.2423	0.27	0.02	0.15	0.06	0.254	0.31	0.05	D	0.085	B	0.026	B	0.008	N	1.000	P	1.245	L	2.51	T	-0.948	T	0.000	T	0.124	1.011	9.131	3.3	1.032	3.716	8.415	1.011458	NA	0.07	0.313256	0.10168	NA	0.174	NA	10.4887774
603	10	73558886	73558886	G	A	exonic	CDH23	NA	nonsynonymous SNV	CDH23:NM_001171933:exon4:c.G353A:p.R118Q,CDH23:NM_001171934:exon4:c.G353A:p.R118Q,CDH23:NM_022124:exon49:c.G7073A:p.R2358Q	exonic	ENSG00000107736	NA	nonsynonymous SNV	ENSG00000107736:ENST00000398788:exon4:c.G353A:p.R118Q,ENSG00000107736:ENST00000224721:exon50:c.G7088A:p.R2363Q	Score=512;Name=lod=160	NA	10q22.1	Score=786;Name=V$ER_Q6	NA	NA	NA	rs4747194	0.35	0.35	0.326	0.341254	0.2783	0.5298	0.3501	0.267	0.3057	0.28	0.52	0.3	0.29	0.3081	0.52	0.78	T	0.027	B	0.015	B	0.000	N	0.000	P	1.68	L	4.67	T	-1.020	T	0.000	T	0.096	2.477	14.24	2.71	0.314	0.823	10.597	2.477311	2.477311	0.15	0.261393	0.263289	ID=COSM146954;OCCURENCE=1(stomach)	0.333	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000039262.1|RCV000124203.1;CLNDSDB=.|.;CLNDSDBID=.|.	10.4855404
604	18	77246406	77246406	T	G	exonic	NFATC1	NA	nonsynonymous SNV	NFATC1:NM_172388:exon8:c.T835G:p.C279G,NFATC1:NM_006162:exon9:c.T2251G:p.C751G,NFATC1:NM_172387:exon9:c.T2212G:p.C738G,NFATC1:NM_172389:exon9:c.T2212G:p.C738G	exonic	ENSG00000131196	NA	nonsynonymous SNV	ENSG00000131196:ENST00000397790:exon8:c.T835G:p.C279G,ENSG00000131196:ENST00000545796:exon8:c.T835G:p.C279G,ENSG00000131196:ENST00000253506:exon9:c.T2251G:p.C751G,ENSG00000131196:ENST00000318065:exon9:c.T2212G:p.C738G,ENSG00000131196:ENST00000329101:exon9:c.T2212G:p.C738G,ENSG00000131196:ENST00000427363:exon9:c.T2251G:p.C751G	Score=300;Name=lod=22	NA	18q23	NA	NA	NA	NA	rs754093	0.38	0.38	0.353	0.338858	0.4722	0.3542	0.415	0.1566	0.3783	0.47	0.38	0.47	0.15	0.4172	0.47	0	D	0.872	P	0.325	B	0.001	N	0.000	P	1.73	L	2.03	T	-0.908	T	0.000	T	0.448	1.124	9.583	3.49	0.745	4.802	9.691	1.124206	NA	0.01	0.463471	0.183386	ID=COSM438403;OCCURENCE=1(breast)	0.297	NA	10.4804624
604	17	38131187	38131187	C	A	exonic	GSDMA	NA	nonsynonymous SNV	GSDMA:NM_178171:exon10:c.C941A:p.T314N	exonic	ENSG00000167914	NA	nonsynonymous SNV	ENSG00000167914:ENST00000301659:exon10:c.C941A:p.T314N	Score=507;Name=lod=153	NA	17q21.1	NA	NA	NA	NA	rs56030650	0.42	0.42	0.396	0.382788	0.4573	0.4742	0.3847	0.3132	0.3047	0.46	0.48	0.41	0.29	0.4271	0.48	0.34	T	0.968	D	0.637	P	0.062	N	0.617	P	1.79	L	1.91	T	-0.893	T	0.000	T	0.098	2.002	12.65	3.96	0.779	1.437	13.316	2.002462	2.002462	NA	0.471905	0.332454	NA	0.428	NA	10.4770284
605	8	120429024	120429024	G	A	exonic	NOV	NA	nonsynonymous SNV	NOV:NM_002514:exon2:c.G125A:p.R42Q	exonic	ENSG00000136999	NA	nonsynonymous SNV	ENSG00000136999:ENST00000259526:exon2:c.G125A:p.R42Q	NA	NA	8q24.12	NA	Name=E2F6	Name=125	NA	rs2279112	0.29	0.29	0.319	0.312899	0.2266	0.1538	0.1902	0.5681	0.3078	0.22	0.17	0.22	0.58	0.3636	0.58	1	T	0.0	B	0.0	B	0.778	N	1.000	P	-0.55	N	0.43	T	-0.996	T	0.000	T	0.049	1.708	11.67	-8.39	-1.696	-0.773	5.490	1.708383	1.708383	1	0.268281	0.523656	NA	0.261	NA	10.4748524
605	15	80263345	80263345	A	C	exonic	BCL2A1	NA	nonsynonymous SNV	BCL2A1:NM_001114735:exon1:c.T117G:p.N39K,BCL2A1:NM_004049:exon1:c.T117G:p.N39K	exonic	ENSG00000140379	NA	nonsynonymous SNV	ENSG00000140379:ENST00000267953:exon1:c.T117G:p.N39K,ENSG00000140379:ENST00000335661:exon1:c.T117G:p.N39K	NA	NA	15q25.1	NA	Name=Pol2-4H8,NFKB	Name=123	NA	rs1138358	0.43	0.43	0.441	0.458866	0.2624	0.5367	0.3127	0.6377	0.4427	0.26	0.55	0.37	0.63	0.3366	0.63	0.78	T	0.052	B	0.016	B	0.886	N	1.000	P	0.41	N	2.39	T	-0.920	T	0.000	T	0.007	0.027	4.156	-10.2	-1.753	-3.817	1.529	0.027388	NA	0.89	0.261395	0.561053	NA	0.435	NA	10.4729384
605	6	106999822	106999822	G	A	exonic	AIM1	NA	nonsynonymous SNV	AIM1:NM_001624:exon12:c.G4184A:p.C1395Y	exonic	ENSG00000112297	NA	nonsynonymous SNV	ENSG00000112297:ENST00000457437:exon6:c.G641A:p.C214Y,ENSG00000112297:ENST00000535438:exon6:c.G641A:p.C214Y,ENSG00000112297:ENST00000369066:exon12:c.G4184A:p.C1395Y	Score=582;Name=lod=310	NA	6q21	Score=845;Name=V$POU6F1_01	NA	NA	NA	rs2297970	0.18	0.18	0.172	0.199081	0.2873	0.0565	0.1988	0.121	0.3609	0.3	0.05	0.21	0.13	0.269	0.31	0.22	T	0.295	B	0.355	B	0.002	N	0.140	P	0.515	N	-0.95	T	-0.859	T	0.154	T	0.345	1.433	10.73	5.03	1.489	0.941	8.493	1.432797	1.432797	0.06	0.305769	0.149342	ID=COSM150149;OCCURENCE=1(stomach)	0.188	NA	10.4712644
605	1	26582091	26582091	G	A	exonic	CEP85	NA	nonsynonymous SNV	CEP85:NM_022778:exon4:c.G638A:p.S213N	exonic	ENSG00000130695	NA	nonsynonymous SNV	ENSG00000130695:ENST00000451429:exon3:c.G485A:p.S162N,ENSG00000130695:ENST00000252992:exon4:c.G638A:p.S213N,ENSG00000130695:ENST00000476272:exon4:c.G638A:p.S213N	NA	NA	1p36.11	NA	NA	NA	NA	rs3795686	0.23	0.23	0.216	0.186302	0.3022	0.2599	0.2363	0.0575	0.1299	0.3	0.25	0.24	0.07	0.2533	0.31	1	T	0.0	B	0.001	B	0.000	D	0.995	P	-0.205	N	2.78	T	-0.933	T	0.000	T	0.004	-1.134	0.115	4.24	1.069	1.327	9.919	-1.133765	NA	0.69	0.307558	0.094871	NA	0.232	NA	10.4702754
605	3	14174427	14174427	A	T	exonic	TMEM43	NA	nonsynonymous SNV	TMEM43:NM_024334:exon6:c.A504T:p.K168N	exonic	ENSG00000170876	NA	nonsynonymous SNV	ENSG00000170876:ENST00000306077:exon6:c.A504T:p.K168N	Score=569;Name=lod=275	NA	3p25.1	Score=830;Name=V$RREB1_01	NA	NA	NA	rs4685076	0.33	0.33	0.32	0.352636	0.2545	0.4613	0.366	0.3026	0.3998	0.26	0.41	0.35	0.34	0.3209	0.41	0.36	T	0.203	B	0.123	B	0.000	D	0.017	P	0.805	L	1.3	T	-0.896	T	0.000	T	0.122	2.835	15.44	1.56	0.298	0.905	7.874	2.834829	2.834829	0.23	0.287791	0.287108	NA	0.225	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=mult|single;CLNACC=RCV000039387.3|RCV000125538.1;CLNDSDB=.|.;CLNDSDBID=.|.	10.4701424
605	12	31256905	31256905	T	C	exonic	DDX11	NA	nonsynonymous SNV	DDX11:NM_001257144:exon27:c.T2851C:p.C951R,DDX11:NM_152438:exon27:c.T2851C:p.C951R	exonic	ENSG00000013573	NA	nonsynonymous SNV	ENSG00000013573:ENST00000407793:exon27:c.T2851C:p.C951R,ENSG00000013573:ENST00000545668:exon27:c.T2851C:p.C951R	NA	NA	12p11.21	NA	Name=FOXA1_(SC-101058),FOXA2_(SC-6554),FOXA1_(C-20)	Name=30	NA	rs1046458	0.54	0.54	0.517	0.638379	0.4553	0.8105	0.6153	0.708	0.5716	0.36	0.73	0.52	0.61	0.4082	0.73	.	.	0.0	B	0.0	B	.	.	1.000	P	0.345	N	-0.68	T	-0.962	T	0.000	T	0.104	-1.335	0.031	-2.53	-1.616	-0.876	4.767	-1.335212	NA	0	NA	NA	NA	0.116	NA	10.4698334
605	8	144406705	144406705	C	T	exonic	TOP1MT	NA	nonsynonymous SNV	TOP1MT:NM_001258447:exon6:c.G472A:p.V158I,TOP1MT:NM_052963:exon6:c.G766A:p.V256I,TOP1MT:NM_001258446:exon7:c.G472A:p.V158I	exonic	ENSG00000184428	NA	nonsynonymous SNV	ENSG00000184428:ENST00000329245:exon6:c.G766A:p.V256I,ENSG00000184428:ENST00000519139:exon6:c.G472A:p.V158I,ENSG00000184428:ENST00000519148:exon6:c.G472A:p.V158I,ENSG00000184428:ENST00000522041:exon6:c.G472A:p.V158I,ENSG00000184428:ENST00000519591:exon7:c.G472A:p.V158I,ENSG00000184428:ENST00000521193:exon7:c.G472A:p.V158I,ENSG00000184428:ENST00000523676:exon7:c.G472A:p.V158I	Score=543;Name=lod=215	NA	8q24.3	NA	NA	NA	NA	rs11544484	0.27	0.27	0.292	0.275759	0.3121	0.0754	0.1873	0.5015	0.2025	0.3	0.07	0.2	0.51	0.2706	0.51	1	T	0.042	B	0.026	B	0.353	N	0.999	P	-0.775	N	1.24	T	-1.042	T	0.000	T	0.208	-1.661	0.012	-7.1	-1.752	1.413	9.912	-1.660811	NA	1	0.282093	0.494553	NA	0.304	NA	10.4685404
605	18	61647069	61647069	G	A	exonic	SERPINB8	NA	nonsynonymous SNV	SERPINB8:NM_001031848:exon3:c.G203A:p.R68Q,SERPINB8:NM_002640:exon3:c.G203A:p.R68Q,SERPINB8:NM_198833:exon3:c.G203A:p.R68Q	exonic	ENSG00000166401	NA	nonsynonymous SNV	ENSG00000166401:ENST00000353706:exon3:c.G203A:p.R68Q,ENSG00000166401:ENST00000397985:exon3:c.G203A:p.R68Q,ENSG00000166401:ENST00000397988:exon3:c.G203A:p.R68Q,ENSG00000166401:ENST00000441827:exon3:c.G203A:p.R68Q,ENSG00000166401:ENST00000448851:exon3:c.G203A:p.R68Q	NA	NA	18q22.1	NA	NA	NA	NA	rs1944270	0.34	0.34	0.354	0.325879	0.2863	0.1944	0.2262	0.6445	0.1421	0.3	0.2	0.25	0.64	0.3009	0.64	1	T	0.0	B	0.001	B	0.276	N	1.000	P	-0.575	N	-1.77	D	-1.015	T	0.000	T	0.263	-1.263	0.047	-5.63	-1.431	-2.669	10.542	-1.263202	NA	1	0.280116	0.573309	NA	0.391	NA	10.4660174
606	21	46067180	46067180	C	T	exonic	KRTAP10-11	NA	nonsynonymous SNV	KRTAP10-11:NM_198692:exon1:c.C805T:p.R269C	exonic	ENSG00000243489	NA	nonsynonymous SNV	ENSG00000243489:ENST00000334670:exon1:c.C805T:p.R269C	NA	NA	21q22.3	Score=780;Name=V$HEN1_02	NA	NA	NA	rs462007	0.81	0.81	0.805	0.816094	0.8062	0.6796	0.7954	0.9887	0.7485	0.81	0.67	0.82	0.98	0.7801	0.98	0.06	T	1.0	D	0.895	P	.	.	0.001	P	1.955	M	5.85	T	-0.939	T	0.000	T	0.125	0.878	8.562	3.04	0.187	-1.248	6.258	0.877898	NA	0.03	0.782837	0.956176	NA	0.63	NA	10.4641964
606	9	15188106	15188106	T	C	exonic	TTC39B	NA	nonsynonymous SNV	TTC39B:NM_001168341:exon12:c.A1051G:p.I351V,TTC39B:NM_001168342:exon12:c.A763G:p.I255V,TTC39B:NM_001168340:exon13:c.A1219G:p.I407V,TTC39B:NM_001168339:exon14:c.A1252G:p.I418V,TTC39B:NM_152574:exon14:c.A1258G:p.I420V	exonic	ENSG00000155158	NA	nonsynonymous SNV	ENSG00000155158:ENST00000297615:exon12:c.A1051G:p.I351V,ENSG00000155158:ENST00000507993:exon12:c.A763G:p.I255V,ENSG00000155158:ENST00000380850:exon13:c.A1219G:p.I407V,ENSG00000155158:ENST00000355694:exon14:c.A1060G:p.I354V,ENSG00000155158:ENST00000507285:exon14:c.A763G:p.I255V,ENSG00000155158:ENST00000512701:exon14:c.A1258G:p.I420V	Score=631;Name=lod=491	NA	9p22.3	NA	NA	Name=3	NA	rs1407977	0.76	0.76	0.772	0.772564	0.5964	0.9236	0.7089	0.8548	0.7321	0.6	0.94	0.67	0.87	0.6816	0.94	0.55	T	0.002	B	0.012	B	0.000	N	0.000	P	2.24	M	0.99	T	-0.987	T	0.000	T	0.081	-0.491	1.742	2.85	0.342	1.742	12.630	-0.491464	NA	0.31	0.5913	0.804812	ID=COSM455697;OCCURENCE=1(breast)	0.739	NA	10.4640334
606	6	97626374	97626374	A	G	exonic	MMS22L	NA	nonsynonymous SNV	MMS22L:NM_198468:exon18:c.T2624C:p.V875A	exonic	ENSG00000146263	NA	nonsynonymous SNV	ENSG00000146263:ENST00000369251:exon16:c.T2504C:p.V835A,ENSG00000146263:ENST00000275053:exon18:c.T2624C:p.V875A	Score=389;Name=lod=51	NA	6q16.1	NA	NA	NA	NA	rs1737145	0.37	0.37	0.379	0.41254	0.4662	0.245	0.3746	0.4228	0.5429	0.45	0.21	0.37	0.43	0.4366	0.47	0.27	T	0.675	P	0.13	B	0.212	N	0.955	P	1.78	L	2.02	T	-1.057	T	0.022	T	0.104	2.313	13.69	3.37	1.052	3.642	7.626	2.313357	2.313357	0.27	0.472339	0.428214	NA	0.406	NA	10.4581944
606	7	123197691	123197691	G	C	intronic	NDUFA5	NA	NA	NA	exonic	ENSG00000128609	NA	stopgain	ENSG00000128609:ENST00000471770:exon1:c.C9G:p.Y3X	NA	NA	7q31.32	NA	Name=Oct-2,POU2F2,NRSF,Pol2,PAX5-C20,PAX5-N19,Pol2(b),HA-E2F1,Sin3Ak-20,Pol2-4H8	Name=32	NA	rs118062590	0.01	0.01	0.002	0.00419329	0.0199	NA	0.0014	NA	NA	0.02	NA	0.0028	NA	0.0099	0.02	0.32	T	.	.	.	.	.	.	1.000	N	.	.	.	.	.	.	.	.	.	3.443	17.66	-9.07	-1.498	-0.428	3.661	3.443469	3.443469	NA	0.013059	0.001712	NA	NA	NA	10.457141
607	11	4870284	4870284	G	C	exonic	OR51S1	NA	nonsynonymous SNV	OR51S1:NM_001004758:exon1:c.C155G:p.T52S	exonic	ENSG00000176922	NA	nonsynonymous SNV	ENSG00000176922:ENST00000322101:exon1:c.C155G:p.T52S	NA	NA	11p15.4	NA	Name=CTCF	NA	NA	rs35918613	0.08	0.08	0.058	0.0497204	0.1481	NA	0.0937	0.0136	0.0174	0.15	NA	0.13	0.02	0.0946	0.15	0.18	T	0.521	P	0.272	B	0.008	N	1.000	P	1.495	L	-0.63	T	-1.024	T	0.002	T	0.074	0.364	5.974	3.21	1.390	0.091	8.453	0.363637	NA	0.05	0.135761	0.037483	NA	0.109	NA	10.4548724
607	22	41548008	41548008	A	G	exonic	EP300	NA	nonsynonymous SNV	EP300:NM_001429:exon15:c.A2989G:p.I997V	exonic	ENSG00000100393	NA	nonsynonymous SNV	ENSG00000100393:ENST00000263253:exon15:c.A2989G:p.I997V	NA	NA	22q13.2	NA	NA	NA	NA	rs20551	0.21	0.21	0.153	0.223442	0.3032	0.0536	0.513	0.0227	0.3824	0.31	0.06	0.5	0.03	0.2959	0.5	0.32	T	0.0	B	0.0	B	0.299	N	1.000	P	0	N	-1.56	D	-0.944	T	0.000	T	0.018	0.581	7.139	3.62	0.432	2.165	10.289	0.581359	NA	0.29	0.280349	0.060372	NA	0.275	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000079673.2;CLNDSDB=.;CLNDSDBID=.	10.4538844
607	3	66434643	66434643	T	C	exonic	LRIG1	NA	nonsynonymous SNV	LRIG1:NM_015541:exon14:c.A1843G:p.M615V	exonic	ENSG00000144749	NA	nonsynonymous SNV	ENSG00000144749:ENST00000273261:exon14:c.A1843G:p.M615V,ENSG00000144749:ENST00000383703:exon15:c.A1915G:p.M639V	Score=439;Name=lod=81	NA	3p14.1	NA	NA	NA	NA	rs2306272	0.38	0.38	0.356	0.36222	0.2922	0.7341	0.2435	0.1513	0.4202	0.3	0.73	0.29	0.17	0.3133	0.73	0.32	T	0.007	B	0.026	B	0.007	N	0.000	P	-0.045	N	1.06	T	-0.970	T	0.000	T	0.113	0.839	8.389	5.0	1.126	6.232	12.850	0.839336	NA	0.25	0.274186	0.144576	NA	0.362	NA	10.4536474
607	19	8987218	8987218	G	T	exonic	MUC16	NA	nonsynonymous SNV	MUC16:NM_024690:exon68:c.C41869A:p.Q13957K	exonic	ENSG00000181143	NA	nonsynonymous SNV	ENSG00000181143:ENST00000380951:exon20:c.C1792A:p.Q598K,ENSG00000181143:ENST00000397910:exon68:c.C41869A:p.Q13957K	Score=309;Name=lod=24	NA	19p13.2	Score=952;Name=V$LMO2COM_01	NA	NA	NA	rs3764556	0.37	0.37	0.357	0.435104	0.2734	0.4286	0.2824	0.5885	0.5092	0.27	0.38	0.27	0.59	0.3399	0.59	0.09	T	0.071	B	0.277	B	0.004	N	.	.	2.925	M	1.68	T	-0.977	T	0.000	T	0.109	0.491	6.661	1.37	0.472	1.684	8.348	0.490582	NA	NA	0.272438	0.513456	NA	0.428	NA	10.4475954
608	19	56703248	56703248	G	A	exonic	ZSCAN5B	NA	nonsynonymous SNV	ZSCAN5B:NM_001080456:exon2:c.C559T:p.P187S	exonic	ENSG00000197213	NA	nonsynonymous SNV	ENSG00000197213:ENST00000358992:exon2:c.C559T:p.P187S,ENSG00000197213:ENST00000586855:exon3:c.C559T:p.P187S	NA	NA	19q13.43	NA	NA	NA	NA	rs527025	0.25	0.25	0.252	0.246006	0.2932	0.2798	0.2032	0.1936	0.2638	0.29	0.28	0.22	0.19	0.2872	0.31	0.25	T	1.0	D	0.996	D	.	.	1.000	P	2.595	M	3.3	T	-1.028	T	0.000	T	0.046	1.762	11.85	-2.51	-0.516	-0.393	3.894	1.762444	1.762444	0.15	0.313953	0.20404	NA	0.232	NA	10.4389804
608	19	2118692	2118692	C	T	exonic	AP3D1	NA	nonsynonymous SNV	AP3D1:NM_001261826:exon15:c.G1621A:p.G541R,AP3D1:NM_003938:exon15:c.G1621A:p.G541R	exonic	ENSG00000065000	NA	nonsynonymous SNV	ENSG00000065000:ENST00000350812:exon10:c.G1114A:p.G372R,ENSG00000065000:ENST00000356926:exon14:c.G1348A:p.G450R,ENSG00000065000:ENST00000345016:exon15:c.G1621A:p.G541R,ENSG00000065000:ENST00000355272:exon15:c.G1621A:p.G541R	NA	NA	19p13.3	NA	NA	NA	NA	rs34569645	0.07	0.07	0.064	0.0758786	0.1123	NA	0.0648	0.0734	0.1278	0.11	NA	0.08	0.08	0.1267	0.16	0.53	T	0.63	P	0.186	B	0.804	N	1.000	P	2.42	M	1.74	T	-1.041	T	0.000	T	0.084	-0.247	2.81	2.61	0.421	2.416	12.673	-0.247155	NA	0.4	0.155994	0.08627	NA	0.065	NA	10.4383394
608	22	44342116	44342116	A	G	exonic	PNPLA3	NA	nonsynonymous SNV	PNPLA3:NM_025225:exon9:c.A1300G:p.K434E	exonic	ENSG00000100344	NA	nonsynonymous SNV	ENSG00000100344:ENST00000216180:exon9:c.A1300G:p.K434E,ENSG00000100344:ENST00000423180:exon9:c.A1288G:p.K430E	NA	NA	22q13.31	NA	Name=CTCF	Name=138	NA	rs2294918	0.77	0.77	0.746	0.78774	0.6292	0.8185	0.7882	0.8964	0.772	0.64	0.85	0.76	0.89	0.6778	0.89	0.31	T	0.0	B	0.0	B	0.000	N	1.000	P	0	N	1.36	T	-0.993	T	0.000	T	0.017	-1.344	0.03	-5.47	-1.617	-2.202	1.474	-1.3437	NA	1	0.591047	0.854744	NA	0.783	NA	10.4352864
609	18	13068132	13068132	T	C	exonic	CEP192	NA	nonsynonymous SNV	CEP192:NM_032142:exon23:c.T4654C:p.S1552P	exonic	ENSG00000101639	NA	nonsynonymous SNV	ENSG00000101639:ENST00000430049:exon13:c.T3229C:p.S1077P,ENSG00000101639:ENST00000510237:exon14:c.T3454C:p.S1152P,ENSG00000101639:ENST00000325971:exon21:c.T2866C:p.S956P,ENSG00000101639:ENST00000506447:exon23:c.T4654C:p.S1552P	Score=410;Name=lod=62	NA	18p11.21	NA	NA	Name=15	NA	rs578208	0.74	0.74	0.776	0.747204	0.6203	0.8105	0.6354	0.8669	0.7301	0.62	0.81	0.65	0.88	0.6623	0.88	1	T	0.0	B	0.0	B	0.000	N	0.993	P	-2.215	N	1.86	T	-0.962	T	0.000	T	0.098	0.532	6.879	5.37	1.415	4.296	14.643	0.531696	NA	NA	0.619186	0.809805	NA	0.688	NA	10.4315474
609	11	118221350	118221350	G	T	exonic	CD3G	NA	nonsynonymous SNV	CD3G:NM_000073:exon4:c.G391T:p.V131F	exonic	ENSG00000160654	NA	nonsynonymous SNV	ENSG00000160654:ENST00000532917:exon4:c.G391T:p.V131F	Score=414;Name=lod=64	NA	11q23.3	NA	NA	NA	NA	rs3753058	0.21	0.21	NA	0.297524	0.1789	0.5119	0.1124	0.1611	0.5143	0.14	0.45	0.11	0.1	0.2189	0.45	0.09	T	0.986	D	0.669	P	0.008	N	0.000	P	2.215	M	-0.03	T	-0.961	T	0.000	T	0.71	4.042	20.7	1.63	0.046	0.322	9.204	4.042038	4.042038	0.02	0.004423	0.004318	NA	NA	NA	10.4311104
609	13	32811607	32811607	G	A	exonic	FRY	NA	nonsynonymous SNV	FRY:NM_023037:exon44:c.G5902A:p.G1968S	exonic	ENSG00000073910	NA	nonsynonymous SNV	ENSG00000073910:ENST00000380250:exon44:c.G5902A:p.G1968S	Score=358;Name=lod=38	NA	13q13.1	NA	NA	NA	NA	rs2806639	0.23	0.23	0.229	0.215855	0.3091	0.004	0.2392	0.3487	0.1421	0.32	0.01	0.25	0.32	0.2811	0.32	0.47	T	0.0	B	0.001	B	0.001	N	0.000	P	1.245	L	2.01	T	-0.917	T	0.000	T	0.154	0.024	4.136	6.17	2.941	1.858	15.946	0.023614	NA	0.61	0.313216	0.3215	NA	0.188	NA	10.4299174
609	16	81248745	81248745	A	G	exonic	PKD1L2	NA	nonsynonymous SNV	PKD1L2:NM_001076780:exon3:c.T518C:p.L173S	exonic	ENSG00000166473,ENSG00000269323	NA	nonsynonymous SNV	ENSG00000166473:ENST00000337114:exon3:c.T518C:p.L173S,ENSG00000269323:ENST00000599697:exon3:c.T518C:p.L173S	Score=466;Name=lod=104	NA	16q23.2	NA	NA	Name=36	NA	rs8060294	0.4	0.4	0.36	0.390176	0.2962	0.4345	0.3473	0.5454	0.2618	0.31	0.41	0.34	0.55	0.3318	0.55	1	T	0.0	B	0.0	B	0.026	N	0.000	P	.	.	2.42	T	-0.928	T	0.000	T	0.337	1.529	11.07	3.79	0.438	5.197	10.266	1.52924	1.52924	0.48	0.277778	0.506653	ID=COSM1563477,COSM1563476;OCCURENCE=1(large_intestine)	0.377	NA	10.4275554
610	2	133541575	133541575	C	T	exonic	NCKAP5	NA	nonsynonymous SNV	NCKAP5:NM_207363:exon14:c.G2809A:p.V937I	exonic	ENSG00000176771	NA	nonsynonymous SNV	ENSG00000176771:ENST00000317721:exon12:c.G2809A:p.V937I,ENSG00000176771:ENST00000409261:exon14:c.G2809A:p.V937I	Score=425;Name=lod=71	NA	2q21.2	Score=840;Name=V$OLF1_01	NA	NA	NA	rs12611515	0.39	0.39	0.413	0.372804	0.2952	0.497	0.3141	0.4554	0.2546	0.28	0.52	0.33	0.44	0.3256	0.52	0.25	T	0.003	B	0.003	B	0.715	U	0.000	P	0.805	L	2.82	T	-0.947	T	0.000	T	0.036	-0.051	3.753	3.36	0.753	2.178	3.561	-0.051168	NA	0.05	0.288158	0.44081	ID=COSM441142;OCCURENCE=2(breast)	0.341	NA	10.4243754
610	11	6898663	6898663	G	A	exonic	OR10A4	NA	nonsynonymous SNV	OR10A4:NM_207186:exon1:c.G785A:p.R262Q	exonic	ENSG00000170782	NA	nonsynonymous SNV	ENSG00000170782:ENST00000379829:exon1:c.G785A:p.R262Q	Score=440;Name=lod=82	NA	11p15.4	NA	NA	NA	NA	rs10839635	0.3	0.3	0.276	0.309105	0.325	0.3988	0.2882	0.2042	0.3569	0.33	0.35	0.28	0.19	0.3007	0.35	0.53	T	0.907	P	0.627	P	0.002	N	0.973	P	0.565	N	1.21	T	-0.978	T	0.000	T	0.238	1.152	9.692	4.04	2.554	0.803	7.878	1.152108	NA	0.15	0.284218	0.236256	NA	0.29	NA	10.4234154
610	20	18395988	18395988	C	T	exonic	DZANK1	NA	nonsynonymous SNV	DZANK1:NM_001099407:exon11:c.G1060A:p.G354S	exonic	ENSG00000089091	NA	nonsynonymous SNV	ENSG00000089091:ENST00000377630:exon10:c.G541A:p.G181S,ENSG00000089091:ENST00000262547:exon11:c.G1060A:p.G354S,ENSG00000089091:ENST00000329494:exon12:c.G1066A:p.G356S,ENSG00000089091:ENST00000357236:exon12:c.G718A:p.G240S	Score=410;Name=lod=62	NA	20p11.23	Score=784;Name=V$STAT5A_02	NA	NA	NA	rs6035037	0.24	0.24	0.223	0.2498	0.3151	0.1696	0.2983	0.1573	0.3558	0.31	0.18	0.27	0.16	0.2892	0.31	0.11	T	0.352	B	0.056	B	0.181	N	1.000	P	0.075	N	0.76	T	-1.013	T	0.000	T	0.362	2.563	14.53	3.54	0.619	3.120	8.633	2.562631	2.562631	0.1	0.306917	0.167973	ID=COSM443500,COSM443499;OCCURENCE=1(breast)	0.138	NA	10.4221164
610	10	63958112	63958112	T	C	exonic	RTKN2	NA	nonsynonymous SNV	RTKN2:NM_145307:exon12:c.A1385G:p.H462R	exonic	ENSG00000182010	NA	nonsynonymous SNV	ENSG00000182010:ENST00000315289:exon8:c.A791G:p.H264R,ENSG00000182010:ENST00000373789:exon12:c.A1385G:p.H462R,ENSG00000182010:ENST00000395265:exon13:c.A1448G:p.H483R	Score=419;Name=lod=67	Name=Rheumatoid arthritis	10q21.2	Score=736;Name=V$HOX13_01	NA	NA	NA	rs3125734	0.65	0.65	0.639	0.588858	0.6362	0.8998	0.7017	0.3132	0.5123	0.64	0.91	0.67	0.34	0.6339	0.91	0.16	T	0.001	B	0.001	B	0.057	N	0.000	P	0.84	L	1.63	T	-1.056	T	0.000	T	0.03	-0.528	1.595	2.33	0.379	1.674	9.116	-0.528166	NA	0.47	0.641163	0.382887	NA	0.478	NA	10.4220704
610	19	49949652	49949652	G	A	exonic	PIH1D1	NA	nonsynonymous SNV	PIH1D1:NM_017916:exon9:c.C860T:p.P287L	exonic	ENSG00000104872	NA	nonsynonymous SNV	ENSG00000104872:ENST00000262265:exon9:c.C860T:p.P287L,ENSG00000104872:ENST00000596049:exon10:c.C860T:p.P287L	NA	NA	19q13.33	NA	Name=ZNF263,CTCF	NA	NA	rs7462	0.22	0.22	0.226	0.185703	0.3231	0.005	0.2032	0.2746	0.0982	0.32	0.01	0.22	0.3	0.2531	0.34	0.08	T	0.0	B	0.0	B	0.023	N	1.000	P	0.55	N	2.34	T	-0.928	T	0.000	T	0.039	0.073	4.396	2.25	0.954	1.153	6.978	0.073136	NA	0.18	0.336628	0.252837	NA	0.239	NA	10.4205054
610	7	53103794	53103794	C	T	exonic	POM121L12	NA	nonsynonymous SNV	POM121L12:NM_182595:exon1:c.C430T:p.P144S	exonic	ENSG00000221900	NA	nonsynonymous SNV	ENSG00000221900:ENST00000408890:exon1:c.C430T:p.P144S	NA	NA	7p12.1	NA	NA	NA	NA	rs73357087	0.17	0.17	0.118	0.14377	0.1451	0.0982	0.2133	0.2073	0.0542	0.16	0.11	0.2	0.21	0.1359	0.21	0.05	D	0.998	D	0.681	P	.	.	1.000	P	1.545	L	-0.94	T	-1.094	T	0.000	T	0.092	1.849	12.14	0.674	0.171	2.258	6.499	1.849414	1.849414	0.1	0.132041	0.191572	NA	0.21	NA	10.4202924
611	4	38799710	38799710	T	C	exonic	TLR1	NA	nonsynonymous SNV	TLR1:NM_003263:exon4:c.A743G:p.N248S	exonic	ENSG00000174125	NA	nonsynonymous SNV	ENSG00000174125:ENST00000502213:exon3:c.A743G:p.N248S,ENSG00000174125:ENST00000308979:exon4:c.A743G:p.N248S	NA	NA	4p14	Score=824;Name=V$EVI1_04	NA	NA	NA	rs4833095	0.53	0.53	0.576	0.574681	0.2803	0.5992	0.4726	0.8797	0.5123	0.24	0.66	0.44	0.89	0.3921	0.89	0.28	T	0.001	B	0.003	B	0.147	N	1.000	P	0.915	L	1.55	T	-1.027	T	0.000	T	0.021	-0.465	1.852	-3.18	-1.061	-0.228	11.483	-0.464903	NA	0.52	0.249011	0.777122	NA	0.536	CLINSIG=other;CLNDBN=Leprosy_5;CLNREVSTAT=single;CLNACC=RCV000008866.1;CLNDSDB=MedGen:OMIM;CLNDSDBID=C2750733:613223	10.4119224
611	14	94933640	94933640	A	T	exonic	SERPINA9	NA	nonsynonymous SNV	SERPINA9:NM_175739:exon3:c.T762A:p.H254Q,SERPINA9:NM_001042518:exon4:c.T462A:p.H154Q	exonic	ENSG00000170054	NA	nonsynonymous SNV	ENSG00000170054:ENST00000337425:exon3:c.T762A:p.H254Q,ENSG00000170054:ENST00000380365:exon3:c.T708A:p.H236Q,ENSG00000170054:ENST00000448305:exon3:c.T468A:p.H156Q,ENSG00000170054:ENST00000546329:exon3:c.T654A:p.H218Q,ENSG00000170054:ENST00000298845:exon4:c.T462A:p.H154Q,ENSG00000170054:ENST00000424550:exon4:c.T315A:p.H105Q	NA	NA	14q32.13	Score=686;Name=V$P53_01	NA	NA	NA	rs28583900	0.33	0.33	0.306	0.322484	0.3101	0.4643	0.3847	0.146	0.3834	0.32	0.48	0.35	0.16	0.3141	0.48	0.61	T	0.002	B	0.007	B	0.943	N	1.000	P	-1.11	N	-1.68	D	-1.025	T	0.000	T	0.01	-0.576	1.41	-6.94	-1.227	-0.058	1.551	-0.575794	NA	0.67	0.300431	0.159341	NA	0.268	NA	10.4087024
611	19	33605300	33605300	A	G	exonic	GPATCH1	NA	nonsynonymous SNV	GPATCH1:NM_018025:exon15:c.A2171G:p.H724R	exonic	ENSG00000076650	NA	nonsynonymous SNV	ENSG00000076650:ENST00000170564:exon15:c.A2171G:p.H724R	NA	NA	19q13.11	NA	Name=PRDM1_(Val90),JunD	NA	NA	rs10416265	0.53	0.53	0.543	0.592452	0.2475	0.8433	0.3386	0.7239	0.6912	0.26	0.86	0.32	0.73	0.4063	0.86	0.56	T	0.0	B	0.0	B	0.049	N	1.000	P	0.69	N	2.08	T	-1.015	T	0.000	T	0.025	-0.073	3.646	-8.87	-2.702	-1.933	9.373	-0.07252	NA	0.22	0.272093	0.672492	NA	0.514	NA	10.4074404
611	19	57647236	57647236	T	C	exonic	ZIM3	NA	nonsynonymous SNV	ZIM3:NM_052882:exon5:c.A469G:p.N157D	exonic	ENSG00000141946	NA	nonsynonymous SNV	ENSG00000141946:ENST00000269834:exon5:c.A469G:p.N157D	NA	NA	19q13.43	NA	Name=MafK_(ab50322)	NA	NA	rs7252632	0.74	0.74	0.72	0.743211	0.6203	0.9276	0.7046	0.7466	0.7025	0.61	0.94	0.72	0.71	0.6781	0.94	0.04	D	0.0	B	0.0	B	.	.	1.000	P	-0.345	N	3.59	T	-0.902	T	0.000	T	0.003	-2.097	0.006	-4.36	-5.246	-2.390	1.868	-2.097396	NA	0.6	0.627791	0.752837	ID=COSM1396954;OCCURENCE=1(large_intestine)	0.601	NA	10.4071424
611	17	79255998	79255998	G	A	exonic	SLC38A10	NA	synonymous SNV	SLC38A10:NM_001037984:exon5:c.C492T:p.F164F,SLC38A10:NM_138570:exon5:c.C492T:p.F164F	exonic	ENSG00000157637	NA	nonsynonymous SNV	ENSG00000157637:ENST00000543204:exon1:c.C67T:p.H23Y	Score=414;Name=lod=64	NA	17q25.3	NA	NA	NA	NA	rs10871494	0.13	0.13	0.092	0.113219	0.2207	0.003	0.1931	0.1157	0.0562	0.22	0.0017	0.2	0.11	0.1648	0.22	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.091	T	0.000	T	.	1.569	11.2	4.36	2.485	3.645	11.612	1.569041	1.569041	NA	0.207791	0.128688	ID=COSM437772,COSM437773;OCCURENCE=1(breast)	0.123	NA	10.406709
612	17	3628212	3628212	T	C	exonic	GSG2	NA	nonsynonymous SNV	GSG2:NM_031965:exon1:c.T983C:p.I328T	exonic	ENSG00000177602	NA	nonsynonymous SNV	ENSG00000177602:ENST00000325418:exon1:c.T983C:p.I328T	NA	NA	17p13.2	NA	NA	NA	NA	rs220461	0.23	0.23	0.22	0.253594	0.3072	0.3006	0.1556	0.0219	0.5327	0.31	0.31	0.18	0.03	0.3046	0.32	0	D	0.001	B	0.0	B	0.857	N	1.000	P	0.345	N	3.24	T	-0.891	T	0.000	T	0.006	-0.663	1.096	-8.67	-2.050	-2.294	9.806	-0.662582	NA	1	0.318953	0.070132	NA	0.268	NA	10.4025804
612	11	17408630	17408630	C	T	exonic	KCNJ11	NA	nonsynonymous SNV	KCNJ11:NM_000525:exon1:c.G1009A:p.V337I,KCNJ11:NM_001166290:exon2:c.G748A:p.V250I	exonic	ENSG00000187486	NA	nonsynonymous SNV	ENSG00000187486:ENST00000339994:exon1:c.G1009A:p.V337I,ENSG00000187486:ENST00000528731:exon2:c.G748A:p.V250I	NA	Name=Type 2 diabetes	11p15.1	NA	Name=CTCF	NA	NA	rs5215	0.72	0.72	0.755	0.730631	0.6471	0.6617	0.7032	0.9546	0.6043	0.66	0.62	0.69	0.95	0.6448	0.95	0.1	T	0.004	B	0.009	B	0.105	N	1.000	P	.	.	-3.36	D	-0.825	T	0.000	T	0.023	1.801	11.98	-5.99	-1.420	-0.140	21.971	1.800702	1.800702	0.31	0.63918	0.913182	NA	0.754	NA	10.4022534
612	19	12502787	12502787	G	A	exonic	ZNF799	NA	nonsynonymous SNV	ZNF799:NM_001080821:exon4:c.C425T:p.T142M	exonic	ENSG00000196466,ENSG00000268870	NA	nonsynonymous SNV	ENSG00000196466:ENST00000419318:exon4:c.C329T:p.T110M,ENSG00000196466:ENST00000430385:exon4:c.C425T:p.T142M,ENSG00000268870:ENST00000595562:exon4:c.C425T:p.T142M	NA	NA	19p13.2	NA	NA	NA	NA	rs12974755	0.08	0.08	0.061	0.0884585	0.1501	0.0585	0.0793	0.0174	0.1585	0.15	0.05	0.09	0.02	0.1286	0.15	0.01	D	0.995	D	0.741	P	.	.	1.000	P	1.995	M	3.22	T	-1.042	T	0.000	T	0.041	1.529	11.07	-0.771	-0.311	-0.024	6.277	1.5293	1.5293	0.08	0.153372	0.04335	NA	0.043	NA	10.4012614
612	11	102495998	102495998	T	G	exonic	MMP20	NA	nonsynonymous SNV	MMP20:NM_004771:exon1:c.A53C:p.K18T	exonic	ENSG00000137674	NA	nonsynonymous SNV	ENSG00000137674:ENST00000260228:exon1:c.A53C:p.K18T	Score=329;Name=lod=29	NA	11q22.2	NA	Name=BHLHE40	NA	NA	rs2245803	0.68	0.68	0.668	0.676518	0.6262	0.8016	0.6816	0.6036	0.6943	0.62	0.81	0.68	0.61	0.6623	0.81	0.61	T	0.0	B	0.0	B	0.842	N	0.859	P	0	N	2.65	T	-1.012	T	0.000	T	0.226	0.362	5.964	4.12	0.999	2.004	11.56	0.361845	NA	0.58	0.644103	0.624376	NA	0.703	NA	10.4007304
612	1	66058513	66058513	A	G	exonic	LEPR	NA	nonsynonymous SNV	LEPR:NM_001198687:exon5:c.A668G:p.Q223R,LEPR:NM_001198688:exon5:c.A668G:p.Q223R,LEPR:NM_001198689:exon5:c.A668G:p.Q223R,LEPR:NM_001003679:exon6:c.A668G:p.Q223R,LEPR:NM_001003680:exon6:c.A668G:p.Q223R,LEPR:NM_002303:exon6:c.A668G:p.Q223R	exonic	ENSG00000116678	NA	nonsynonymous SNV	ENSG00000116678:ENST00000371058:exon4:c.A668G:p.Q223R,ENSG00000116678:ENST00000344610:exon6:c.A668G:p.Q223R,ENSG00000116678:ENST00000349533:exon6:c.A668G:p.Q223R,ENSG00000116678:ENST00000371059:exon6:c.A668G:p.Q223R,ENSG00000116678:ENST00000371060:exon6:c.A668G:p.Q223R	Score=358;Name=lod=38	NA	1p31.3	NA	NA	NA	NA	rs1137101	0.59	0.59	0.57	0.584265	0.4692	0.869	0.4366	0.5923	0.5031	0.49	0.87	0.42	0.54	0.5103	0.87	0.41	T	0.828	P	0.234	B	0.112	N	0.000	P	1.32	L	0.58	T	-1.102	T	0.050	T	0.208	2.271	13.55	3.66	0.513	2.850	9.228	2.271131	2.271131	0.12	0.454186	0.560826	NA	0.572	CLINSIG=non-pathogenic;CLNDBN=LEPTIN_RECEPTOR_POLYMORPHISM;CLNREVSTAT=single;CLNACC=RCV000009047.1;CLNDSDB=.;CLNDSDBID=.	10.3996474
612	19	49368843	49368843	T	C	exonic	PLEKHA4	NA	nonsynonymous SNV	PLEKHA4:NM_001161354:exon3:c.A109G:p.I37V,PLEKHA4:NM_020904:exon3:c.A109G:p.I37V	exonic	ENSG00000105559	NA	nonsynonymous SNV	ENSG00000105559:ENST00000263265:exon3:c.A109G:p.I37V,ENSG00000105559:ENST00000355496:exon3:c.A109G:p.I37V	Score=403;Name=lod=58	NA	19q13.33	NA	NA	NA	NA	rs506425	0.38	0.38	0.404	0.4377	0.3032	0.1111	0.3242	0.8661	0.4141	0.31	0.12	0.34	0.83	0.3297	0.83	1	T	0.0	B	0.0	B	0.000	N	0.998	P	-1.575	N	2.78	T	-0.994	T	0.000	T	0.011	0.012	4.078	3.98	1.270	3.044	10.498	0.012294	NA	1	0.30314	0.788697	NA	0.464	NA	10.3972934
612	11	6913243	6913243	T	C	exonic	OR2D2	NA	nonsynonymous SNV	OR2D2:NM_003700:exon1:c.A489G:p.I163M	exonic	ENSG00000166368	NA	nonsynonymous SNV	ENSG00000166368:ENST00000299459:exon1:c.A489G:p.I163M	NA	NA	11p15.4	NA	NA	NA	NA	rs1965207	0.11	0.11	0.117	0.133387	0.162	0.0764	0.0937	0.1293	0.1963	0.13	0.07	0.1	0.12	0.1368	0.14	0.04	D	0.395	B	0.54	P	0.003	N	1.000	P	1.26	L	8.72	T	-0.920	T	0.000	T	0.044	2.042	12.79	-10.2	-2.599	-2.769	4.355	2.04214	2.04214	0.08	0.138501	0.136983	NA	NA	NA	10.3960324
612	17	26694861	26694861	G	A	exonic	VTN	NA	nonsynonymous SNV	VTN:NM_000638:exon7:c.C1199T:p.T400M	exonic	ENSG00000109072,ENSG00000272099	NA	nonsynonymous SNV	ENSG00000109072:ENST00000555059:exon1:c.C173T:p.T58M,ENSG00000272099:ENST00000226218:exon7:c.C1199T:p.T400M	NA	NA	17q11.2	NA	NA	Name=2	NA	rs704	0.58	0.58	0.539	0.555112	0.4493	0.7083	0.5389	0.6097	0.4438	0.44	0.77	0.55	0.58	0.5082	0.77	0.22	T	0.943	P	0.115	B	0.004	N	1.000	P	1.15	L	3.67	T	-0.902	T	0.000	T	0.631	1.847	12.13	-8.94	-2.112	-3.133	6.426	1.846907	1.846907	0.29	0.480698	0.565819	NA	0.478	NA	10.3951354
613	8	23060256	23060256	T	C	exonic	TNFRSF10A	NA	nonsynonymous SNV	TNFRSF10A:NM_003844:exon3:c.A422G:p.H141R	exonic	ENSG00000104689	NA	nonsynonymous SNV	ENSG00000104689:ENST00000221132:exon3:c.A422G:p.H141R	NA	NA	8p21.3	NA	Name=GR	NA	NA	rs17620	0.56	0.56	0.533	0.571685	0.4553	0.9742	0.6153	0.2458	0.6861	0.46	0.98	0.57	0.23	0.5254	0.98	0.13	T	0.824	P	0.177	B	0.921	U	1.000	P	1.04	L	0.99	T	-0.910	T	0.000	T	0.018	-0.282	2.65	-6.96	-4.586	-2.096	2.080	-0.282244	NA	0.46	0.459302	0.284385	NA	0.384	NA	10.3933314
613	11	57798942	57798942	A	G	exonic	OR6Q1	NA	nonsynonymous SNV	OR6Q1:NM_001005186:exon1:c.A518G:p.Y173C	exonic	ENSG00000172381	NA	nonsynonymous SNV	ENSG00000172381:ENST00000302622:exon1:c.A518G:p.Y173C	Score=313;Name=lod=25	NA	11q12.1	NA	NA	NA	NA	rs2513726	0.38	0.38	0.356	0.408147	0.2913	0.6825	0.2651	0.3238	0.4611	0.28	0.66	0.27	0.31	0.3518	0.66	1	T	0.0	B	0.0	B	0.001	N	0.000	P	-3.245	N	9.05	T	-0.993	T	0.000	T	0.076	-0.527	1.599	5.04	1.136	5.148	9.753	-0.527015	NA	1	0.298534	0.336665	NA	0.326	NA	10.3916994
613	10	115393929	115393929	G	A	exonic	NRAP	NA	nonsynonymous SNV	NRAP:NM_006175:exon14:c.C1364T:p.S455L,NRAP:NM_001261463:exon15:c.C1469T:p.S490L,NRAP:NM_198060:exon15:c.C1469T:p.S490L	exonic	ENSG00000197893	NA	nonsynonymous SNV	ENSG00000197893:ENST00000360478:exon14:c.C1364T:p.S455L,ENSG00000197893:ENST00000369360:exon14:c.C1364T:p.S455L,ENSG00000197893:ENST00000359988:exon15:c.C1469T:p.S490L,ENSG00000197893:ENST00000369358:exon15:c.C1469T:p.S490L	Score=456;Name=lod=95	NA	10q25.3	NA	NA	NA	NA	rs3189030	0.3	0.3	0.308	0.290735	0.328	0.4266	0.2781	0.1203	0.3517	0.3	0.44	0.31	0.12	0.3061	0.44	0.29	T	0.083	B	0.018	B	0.016	N	0.167	P	2.005	M	2.48	T	-0.935	T	0.000	T	0.199	1.068	9.361	3.28	0.542	2.948	10.661	1.068063	NA	0.16	0.308372	0.139355	ID=COSM1179743;OCCURENCE=1(prostate)	0.239	NA	10.3908614
613	17	27959903	27959903	G	A	exonic	SSH2	NA	nonsynonymous SNV	SSH2:NM_033389:exon15:c.C2228T:p.S743L	exonic	ENSG00000141298	NA	nonsynonymous SNV	ENSG00000141298:ENST00000269033:exon15:c.C2228T:p.S743L,ENSG00000141298:ENST00000540801:exon16:c.C2309T:p.S770L	Score=595;Name=lod=349	NA	17q11.2	NA	NA	NA	NA	rs2289629	0.2	0.2	0.168	0.184704	0.335	0.0764	0.2983	0.1044	0.1697	0.32	0.06	0.3	0.1	0.2782	0.33	0.1	T	0.141	B	0.028	B	0.053	N	0.000	P	2.045	M	0.56	T	-1.067	T	0.000	T	0.163	2.653	14.83	4.1	0.907	3.615	17.957	2.653224	2.653224	0.02	0.332674	0.154335	NA	0.123	NA	10.3874594
613	2	182543455	182543455	T	C	exonic	NEUROD1	NA	nonsynonymous SNV	NEUROD1:NM_002500:exon2:c.A133G:p.T45A	exonic	ENSG00000162992	NA	nonsynonymous SNV	ENSG00000162992:ENST00000295108:exon2:c.A133G:p.T45A	Score=376;Name=lod=45	NA	2q31.3	NA	Name=ZNF263,NRSF	NA	NA	rs1801262	0.73	0.73	0.732	0.770767	0.6123	0.9196	0.745	0.7307	0.8528	0.6	0.92	0.7	0.74	0.7027	0.92	0.76	T	0.0	B	0.0	B	0.289	N	0.000	P	0.345	N	-3.57	D	-0.953	T	0.000	T	0.036	0.082	4.444	4.43	0.741	1.164	9.282	0.082289	NA	0.78	0.631512	0.743305	ID=COSM1179689;OCCURENCE=1(prostate)	0.739	NA	10.3868214
613	2	152352843	152352843	C	G	exonic	NEB	NA	nonsynonymous SNV	NEB:NM_004543:exon140:c.G18829C:p.A6277P,NEB:NM_001164507:exon173:c.G24433C:p.A8145P,NEB:NM_001164508:exon173:c.G24433C:p.A8145P,NEB:NM_001271208:exon174:c.G24538C:p.A8180P	exonic	ENSG00000183091	NA	nonsynonymous SNV	ENSG00000183091:ENST00000509223:exon5:c.G265C:p.A89P,ENSG00000183091:ENST00000397336:exon6:c.G358C:p.A120P,ENSG00000183091:ENST00000424585:exon9:c.G742C:p.A248P,ENSG00000183091:ENST00000413693:exon67:c.G8065C:p.A2689P,ENSG00000183091:ENST00000172853:exon140:c.G18865C:p.A6289P,ENSG00000183091:ENST00000409198:exon141:c.G18865C:p.A6289P,ENSG00000183091:ENST00000603639:exon171:c.G24433C:p.A8145P,ENSG00000183091:ENST00000604864:exon171:c.G24433C:p.A8145P,ENSG00000183091:ENST00000397345:exon173:c.G24433C:p.A8145P,ENSG00000183091:ENST00000427231:exon173:c.G24433C:p.A8145P	Score=641;Name=lod=537	NA	2q23.3	Score=913;Name=V$MEIS1_01	NA	NA	NA	rs7575451	0.68	0.68	0.671	0.627796	0.6541	0.751	0.6945	0.5862	0.4826	0.64	0.78	0.69	0.63	0.6499	0.78	0.85	T	0.0	B	0.001	B	.	.	0.000	P	-0.78	N	4.1	T	-1.033	T	0.000	T	0.698	0.967	8.946	4.11	0.607	3.099	10.384	0.967001	NA	0.31	0.644182	0.594762	NA	0.623	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000081126.3;CLNDSDB=.;CLNDSDBID=.	10.3851514
614	22	30953295	30953295	C	T	exonic	GAL3ST1	NA	nonsynonymous SNV	GAL3ST1:NM_004861:exon3:c.G85A:p.V29M	exonic	ENSG00000128242	NA	nonsynonymous SNV	ENSG00000128242:ENST00000453479:exon1:c.G85A:p.V29M,ENSG00000128242:ENST00000338911:exon2:c.G85A:p.V29M,ENSG00000128242:ENST00000402321:exon2:c.G85A:p.V29M,ENSG00000128242:ENST00000402369:exon2:c.G85A:p.V29M,ENSG00000128242:ENST00000406955:exon2:c.G85A:p.V29M,ENSG00000128242:ENST00000416358:exon2:c.G85A:p.V29M,ENSG00000128242:ENST00000427899:exon2:c.G85A:p.V29M,ENSG00000128242:ENST00000431313:exon2:c.G85A:p.V29M,ENSG00000128242:ENST00000441967:exon2:c.G85A:p.V29M,ENSG00000128242:ENST00000443111:exon2:c.G85A:p.V29M,ENSG00000128242:ENST00000443136:exon2:c.G85A:p.V29M,ENSG00000128242:ENST00000401975:exon3:c.G85A:p.V29M,ENSG00000128242:ENST00000406361:exon3:c.G85A:p.V29M,ENSG00000128242:ENST00000411821:exon3:c.G85A:p.V29M,ENSG00000128242:ENST00000423299:exon3:c.G85A:p.V29M,ENSG00000128242:ENST00000423371:exon3:c.G85A:p.V29M,ENSG00000128242:ENST00000426220:exon3:c.G85A:p.V29M,ENSG00000128242:ENST00000437282:exon3:c.G85A:p.V29M,ENSG00000128242:ENST00000452827:exon3:c.G85A:p.V29M,ENSG00000128242:ENST00000428682:exon4:c.G85A:p.V29M,ENSG00000128242:ENST00000445645:exon4:c.G85A:p.V29M,ENSG00000128242:ENST00000447224:exon4:c.G85A:p.V29M,ENSG00000128242:ENST00000448604:exon5:c.G85A:p.V29M	Score=497;Name=lod=139	NA	22q12.2	NA	Name=CTCF,CTCF_(SC-5916)	Name=3	NA	rs2267161	0.32	0.32	0.329	0.309904	0.326	0.3502	0.2536	0.3646	0.2178	0.31	0.34	0.25	0.34	0.3065	0.37	0.24	T	0.137	B	0.106	B	0.003	N	0.000	P	0.345	N	2.18	T	-0.893	T	0.000	T	0.371	2.327	13.74	1.09	0.316	1.007	7.679	2.327313	2.327313	0.07	0.317674	0.373808	NA	0.428	NA	10.3831594
614	3	45779136	45779136	A	T	exonic	SACM1L	NA	nonsynonymous SNV	SACM1L:NM_014016:exon15:c.A1301T:p.Y434F	exonic	ENSG00000211456	NA	nonsynonymous SNV	ENSG00000211456:ENST00000433336:exon5:c.A332T:p.Y111F,ENSG00000211456:ENST00000541314:exon14:c.A1118T:p.Y373F,ENSG00000211456:ENST00000389061:exon15:c.A1301T:p.Y434F,ENSG00000211456:ENST00000418611:exon16:c.A992T:p.Y331F	Score=618;Name=lod=432	NA	3p21.31	NA	NA	NA	NA	rs1468542	0.57	0.57	0.555	0.548323	0.6849	0.3958	0.5706	0.6505	0.411	0.7	0.35	0.58	0.62	0.6017	0.7	1	T	0.001	B	0.001	B	0.000	D	0.000	P	-0.48	N	2.0	T	-0.985	T	0.000	T	0.296	0.428	6.322	6.06	2.322	5.805	16.613	0.42752	NA	1	0.663721	0.628461	ID=COSM149368;OCCURENCE=1(stomach)	0.507	NA	10.3830124
614	3	124646837	124646837	G	A	exonic	MUC13	NA	nonsynonymous SNV	MUC13:NM_033049:exon2:c.C53T:p.A18V	exonic	ENSG00000173702	NA	nonsynonymous SNV	ENSG00000173702:ENST00000311075:exon2:c.C53T:p.A18V	NA	NA	3q21.2	NA	Name=IRF4_(M-17),BCL11A,PAX5-N19,TCF12	Name=5	NA	rs4679394	0.09	0.09	0.076	0.10623	0.1511	0.0298	0.2003	0.0159	0.1943	0.15	0.02	0.2	0.01	0.146	0.2	0.02	D	0.799	P	0.217	B	0.057	N	1.000	P	0.55	N	2.28	T	-1.034	T	0.000	T	0.035	1.548	11.13	-0.446	-0.111	0.130	3.488	1.548071	1.548071	0.05	0.155233	0.035179	NA	0.109	NA	10.3810004
614	19	54657069	54657069	C	T	intronic	CNOT3	NA	NA	NA	exonic	ENSG00000088038	NA	nonsynonymous SNV	ENSG00000088038:ENST00000358389:exon17:c.C1646T:p.S549L	NA	NA	19q13.42	NA	NA	Name=16	NA	rs42318	0.18	0.18	0.169	0.196286	0.2853	0.1637	0.2133	0.0734	0.2924	0.28	0.14	0.2	0.08	0.2381	0.28	0	D	.	.	.	.	.	.	1.000	P	.	.	.	.	-1.014	T	0.000	T	0.066	1.856	12.16	-4.41	-1.419	-1.469	1.421	1.856036	1.856036	0	0.263435	0.119863	NA	0.21	NA	10.3798317
614	6	130374102	130374102	C	A	exonic	L3MBTL3	NA	nonsynonymous SNV	L3MBTL3:NM_001007102:exon6:c.C473A:p.T158N,L3MBTL3:NM_032438:exon7:c.C548A:p.T183N	exonic	ENSG00000198945	NA	nonsynonymous SNV	ENSG00000198945:ENST00000368139:exon5:c.C473A:p.T158N,ENSG00000198945:ENST00000526019:exon6:c.C473A:p.T158N,ENSG00000198945:ENST00000533560:exon6:c.C473A:p.T158N,ENSG00000198945:ENST00000361794:exon7:c.C548A:p.T183N,ENSG00000198945:ENST00000368136:exon7:c.C548A:p.T183N,ENSG00000198945:ENST00000528385:exon7:c.C548A:p.T183N,ENSG00000198945:ENST00000529410:exon9:c.C548A:p.T183N	Score=403;Name=lod=58	NA	6q23.1	Score=764;Name=V$STAT5A_02	NA	NA	NA	rs9388768	0.54	0.54	0.502	0.503994	0.6461	0.7599	0.6124	0.1142	0.544	0.66	0.73	0.61	0.11	0.6266	0.73	0.3	T	0.0	B	0.001	B	0.041	N	1.000	P	0	N	2.58	T	-1.080	T	0.028	T	0.072	1.007	9.113	5.03	2.498	1.151	13.180	1.007105	NA	0.06	0.68093	0.211984	NA	0.428	NA	10.3797034
614	19	52497250	52497250	G	A	exonic	ZNF615	NA	nonsynonymous SNV	ZNF615:NM_198480:exon6:c.C1079T:p.T360I,ZNF615:NM_001199324:exon7:c.C1112T:p.T371I	exonic	ENSG00000197619	NA	nonsynonymous SNV	ENSG00000197619:ENST00000391795:exon4:c.C1094T:p.T365I,ENSG00000197619:ENST00000376716:exon6:c.C1079T:p.T360I,ENSG00000197619:ENST00000594083:exon6:c.C1112T:p.T371I,ENSG00000197619:ENST00000602063:exon6:c.C1079T:p.T360I,ENSG00000197619:ENST00000598071:exon7:c.C1112T:p.T371I	NA	NA	19q13.41	NA	Name=SETDB1	NA	NA	rs1978717	0.41	0.41	0.434	0.476038	0.3121	0.3929	0.3977	0.6074	0.6084	0.33	0.36	0.4	0.6	0.3666	0.6	1	T	0.0	B	0.001	B	.	.	1.000	P	0.21	N	3.15	T	-0.966	T	0.000	T	0.008	-4.047	0.001	-3.42	-2.010	-0.987	9.982	-4.047464	NA	1	0.277674	0.579664	ID=COSM148712,COSM148711;OCCURENCE=1(stomach)	0.457	NA	10.3769594
614	5	147480080	147480080	G	A	exonic	SPINK5	NA	nonsynonymous SNV	SPINK5:NM_001127698:exon13:c.G1156A:p.D386N,SPINK5:NM_001127699:exon13:c.G1156A:p.D386N,SPINK5:NM_006846:exon13:c.G1156A:p.D386N	exonic	ENSG00000133710	NA	nonsynonymous SNV	ENSG00000133710:ENST00000256084:exon13:c.G1156A:p.D386N,ENSG00000133710:ENST00000359874:exon13:c.G1156A:p.D386N,ENSG00000133710:ENST00000398454:exon13:c.G1156A:p.D386N,ENSG00000133710:ENST00000508733:exon13:c.G1099A:p.D367N	NA	NA	5q32	NA	NA	NA	NA	rs2303064	0.3	0.3	0.33	0.348243	0.1213	0.4246	0.1614	0.559	0.3507	0.13	0.45	0.16	0.5	0.2119	0.5	0.3	T	0.734	P	0.258	B	0.031	N	1.000	P	1.9	L	3.58	T	-0.967	T	0.000	T	0.045	1.477	10.88	3.82	1.349	1.896	9.194	1.47658	1.47658	0.01	0.12506	0.458482	NA	0.268	NA	10.3750734
615	15	99666979	99666979	G	A	exonic	SYNM	NA	unknown	UNKNOWN	exonic	ENSG00000182253	NA	nonsynonymous SNV	ENSG00000182253:ENST00000560674:exon3:c.G130A:p.V44I,ENSG00000182253:ENST00000328642:exon4:c.G985A:p.V329I,ENSG00000182253:ENST00000336292:exon4:c.G985A:p.V329I	NA	NA	15q26.3	NA	NA	Name=2	NA	rs5030691	0.07	0.07	0.088	0.0752796	0.0805	0.0466	0.0432	0.1021	0.0859	0.09	0.05	0.03	0.1	0.1342	0.1	1	T	0.0	B	0.0	B	.	.	1.000	P	.	.	-1.44	T	-0.996	T	0.007	T	0.089	-0.683	1.026	-7.36	-2.152	-1.740	11.008	-0.683404	NA	1	0.079435	0.08245	NA	0.029	NA	10.3725317
615	15	45661678	45661678	T	A	exonic	GATM	NA	nonsynonymous SNV	GATM:NM_001482:exon3:c.A330T:p.Q110H	exonic	ENSG00000171766	NA	nonsynonymous SNV	ENSG00000171766:ENST00000558163:exon2:c.A111T:p.Q37H,ENSG00000171766:ENST00000396659:exon3:c.A330T:p.Q110H,ENSG00000171766:ENST00000558336:exon3:c.A330T:p.Q110H	Score=581;Name=lod=306	NA	15q21.1	NA	NA	NA	NA	rs1288775	0.6	0.6	0.621	0.61861	0.2783	0.8185	0.5692	0.8676	0.4611	0.28	0.85	0.51	0.86	0.4185	0.86	0.55	T	0.0	B	0.0	B	0.116	N	1.000	P	-1.1	N	1.06	T	-1.011	T	0.000	T	0.251	1.279	10.18	3.5	0.129	1.947	4.948	1.278669	1.278669	0.55	0.267217	0.762966	NA	0.464	CLINSIG=probable-non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000117125.2|RCV000125215.1;CLNDSDB=.|.;CLNDSDBID=.|.	10.3693164
615	16	57016092	57016092	G	A	exonic	CETP	NA	nonsynonymous SNV	CETP:NM_000078:exon14:c.G1264A:p.V422I	exonic	ENSG00000087237	NA	nonsynonymous SNV	ENSG00000087237:ENST00000379780:exon13:c.G1084A:p.V362I,ENSG00000087237:ENST00000200676:exon14:c.G1264A:p.V422I,ENSG00000087237:ENST00000566128:exon14:c.G1069A:p.V357I	NA	NA	16q13	NA	Name=ZNF263	NA	NA	rs5882	0.55	0.55	0.532	0.533946	0.669	0.5635	0.5994	0.3623	0.5501	0.67	0.52	0.62	0.36	0.6165	0.68	0.37	T	0.001	B	0.003	B	0.776	N	1.000	P	-0.55	N	3.35	T	-0.987	T	0.000	T	0.043	-1.024	0.227	-6.67	-1.419	-2.553	8.142	-1.024059	NA	1	0.681395	0.414695	NA	0.63	CLINSIG=other;CLNDBN=High_density_lipoprotein_cholesterol_level_quantitative_trait_locus_10;CLNREVSTAT=single;CLNACC=RCV000019077.1;CLNDSDB=.;CLNDSDBID=.	10.3664384
616	8	6338306	6338306	C	A	exonic	MCPH1	NA	nonsynonymous SNV	MCPH1:NM_024596:exon11:c.C2045A:p.T682N	exonic	ENSG00000147316	NA	nonsynonymous SNV	ENSG00000147316:ENST00000344683:exon11:c.C2045A:p.T682N	NA	NA	8p23.1	NA	NA	Name=2	NA	rs12674488	0.14	0.14	0.14	0.146366	0.163	0.1806	0.1153	0.0938	0.1871	0.15	0.18	0.12	0.08	0.1522	0.18	0.13	T	0.981	D	0.873	P	0.021	N	1.000	P	1.545	L	1.6	T	-1.097	T	0.000	T	0.057	2.141	13.12	0.673	-0.152	1.013	18.576	2.140912	2.140912	0.04	0.156145	0.08434	NA	0.174	NA	10.3619884
616	9	96214928	96214928	G	A	exonic	FAM120AOS	NA	nonsynonymous SNV	FAM120AOS:NM_198841:exon1:c.C64T:p.L22F	exonic	ENSG00000188938	NA	nonsynonymous SNV	ENSG00000188938:ENST00000375412:exon1:c.C64T:p.L22F	NA	NA	9q22.31	NA	Name=CCNT2	NA	NA	rs1055710	0.36	0.36	0.359	0.289736	0.3509	0.4187	0.33	0.2247	0.1534	0.36	0.45	0.38	0.23	0.3201	0.45	0.25	T	0.048	B	0.015	B	.	.	1.000	P	0	N	0.51	T	-0.953	T	0.000	T	0.023	2.262	13.52	-6.63	-1.502	-1.624	2.120	2.262325	2.262325	0.57	0.301571	0.218449	NA	0.29	NA	10.3607624
616	17	39684321	39684321	G	C	exonic	KRT19	NA	nonsynonymous SNV	KRT19:NM_002276:exon1:c.C179G:p.A60G	exonic	ENSG00000171345	NA	nonsynonymous SNV	ENSG00000171345:ENST00000361566:exon1:c.C179G:p.A60G,ENSG00000171345:ENST00000455635:exon1:c.C179G:p.A60G	Score=387;Name=lod=50	NA	17q21.2	NA	Name=ZNF263,Pol2-4H8	NA	NA	rs4602	0.73	0.73	0.711	0.748003	0.6471	0.9187	0.7896	0.6445	0.7863	0.63	0.93	0.74	0.64	0.6944	0.93	0.58	T	0.0	B	0.0	B	0.103	N	1.000	P	-1.79	N	-1.07	T	-0.958	T	0.000	T	0.276	-0.265	2.73	4.39	1.213	0.256	14.859	-0.264716	NA	1	0.63279	0.630213	NA	0.58	CLINSIG=untested;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000056945.1;CLNDSDB=.;CLNDSDBID=.	10.3590434
616	6	32188640	32188640	T	C	exonic	NOTCH4	NA	nonsynonymous SNV	NOTCH4:NM_004557:exon5:c.A815G:p.D272G	exonic	ENSG00000204301	NA	nonsynonymous SNV	ENSG00000204301:ENST00000375023:exon5:c.A815G:p.D272G	Score=428;Name=lod=73	NA	6p21.32	NA	NA	NA	NA	rs520692	0.27	0.27	0.25	0.267772	0.3519	0.1935	0.2594	0.208	0.3446	0.34	0.19	0.3	0.22	0.3058	0.34	0.35	T	0.001	B	0.02	B	0.594	N	0.000	P	0.945	L	-2.85	D	-0.793	T	0.356	T	0.021	0.305	5.652	3.6	0.865	2.466	6.691	0.304853	NA	0.33	0.318837	0.212665	NA	NA	NA	10.3567964
617	14	88938652	88938652	A	G	exonic	PTPN21	NA	nonsynonymous SNV	PTPN21:NM_007039:exon15:c.T2807C:p.V936A	exonic	ENSG00000070778	NA	nonsynonymous SNV	ENSG00000070778:ENST00000328736:exon14:c.T2807C:p.V936A,ENSG00000070778:ENST00000556564:exon15:c.T2807C:p.V936A	Score=566;Name=lod=266	NA	14q31.3	NA	NA	NA	NA	rs2274736	0.37	0.37	0.373	0.395767	0.2962	0.38	0.2781	0.5227	0.4264	0.31	0.36	0.28	0.52	0.3431	0.52	0.3	T	0.0	B	0.0	B	0.000	N	1.000	P	-1.04	N	2.65	T	-0.940	T	0.000	T	0.075	1.298	10.25	5.86	1.502	3.948	15.262	1.298031	1.298031	0.42	0.341047	0.506128	NA	0.471	NA	10.3529864
617	9	116060221	116060221	C	T	exonic	RNF183	NA	nonsynonymous SNV	RNF183:NM_145051:exon2:c.G244A:p.A82T	exonic	ENSG00000165188	NA	nonsynonymous SNV	ENSG00000165188:ENST00000478815:exon1:c.G244A:p.A82T,ENSG00000165188:ENST00000416588:exon2:c.G244A:p.A82T,ENSG00000165188:ENST00000441031:exon2:c.G244A:p.A82T,ENSG00000165188:ENST00000297894:exon4:c.G244A:p.A82T	NA	NA	9q32	NA	NA	NA	NA	rs3750533	0.37	0.37	0.386	0.402157	0.3032	0.4226	0.196	0.4478	0.5675	0.31	0.43	0.23	0.48	0.3537	0.48	0.65	T	.	.	.	.	0.202	N	1.000	P	.	.	-3.13	D	-1.023	T	0.000	T	0.007	-0.251	2.79	5.17	0.996	1.729	9.276	-0.251487	NA	NA	0.325898	0.43663	NA	0.406	NA	10.3505354
617	7	20698270	20698270	A	G	exonic	ABCB5	NA	nonsynonymous SNV	ABCB5:NM_001163942:exon5:c.A343G:p.K115E,ABCB5:NM_001163993:exon5:c.A343G:p.K115E,ABCB5:NM_178559:exon5:c.A343G:p.K115E,ABCB5:NM_001163941:exon14:c.A1678G:p.K560E	exonic	ENSG00000004846	NA	nonsynonymous SNV	ENSG00000004846:ENST00000258738:exon5:c.A343G:p.K115E,ENSG00000004846:ENST00000406935:exon5:c.A343G:p.K115E,ENSG00000004846:ENST00000443026:exon5:c.A343G:p.K115E,ENSG00000004846:ENST00000404938:exon14:c.A1678G:p.K560E	Score=295;Name=lod=21	NA	7p21.1	NA	NA	NA	NA	rs2301641	0.34	0.34	0.362	0.363818	0.328	0.2024	0.3127	0.584	0.3057	0.33	0.2	0.31	0.52	0.3368	0.56	1	T	0.0	B	0.0	B	0.000	N	0.997	P	-2.635	N	-0.33	T	-0.943	T	0.000	T	0.158	-0.521	1.621	4.69	1.511	6.508	12.502	-0.521441	NA	1	0.318837	0.55833	NA	0.362	NA	10.3496964
617	10	128192985	128192985	C	T	exonic	C10orf90	NA	nonsynonymous SNV	C10orf90:NM_001004298:exon3:c.G784A:p.D262N	exonic	ENSG00000154493	NA	nonsynonymous SNV	ENSG00000154493:ENST00000284694:exon3:c.G784A:p.D262N,ENSG00000154493:ENST00000356858:exon3:c.G643A:p.D215N,ENSG00000154493:ENST00000392694:exon3:c.G643A:p.D215N,ENSG00000154493:ENST00000432642:exon3:c.G784A:p.D262N,ENSG00000154493:ENST00000454341:exon3:c.G784A:p.D262N,ENSG00000154493:ENST00000544758:exon4:c.G1075A:p.D359N	NA	NA	10q26.2	Score=778;Name=V$HEN1_02	Name=Rad21,CTCF	Name=130	NA	rs11245007	0.45	0.45	0.464	0.500599	0.3082	0.5099	0.4121	0.6876	0.499	0.3	0.48	0.39	0.67	0.3738	0.67	1	T	0.0	B	0.0	B	0.177	N	1.000	P	-1.735	N	2.83	T	-0.982	T	0.000	T	0.023	-0.372	2.249	1.59	-0.113	1.599	5.221	-0.371988	NA	1	0.30186	0.594644	NA	0.413	NA	10.3494734
617	6	32006886	32006886	G	A	exonic	CYP21A2	NA	nonsynonymous SNV	CYP21A2:NM_001128590:exon2:c.G218A:p.R73K,CYP21A2:NM_000500:exon3:c.G308A:p.R103K	exonic	ENSG00000231852	NA	nonsynonymous SNV	ENSG00000231852:ENST00000435122:exon2:c.G218A:p.R73K,ENSG00000231852:ENST00000418967:exon3:c.G308A:p.R103K,ENSG00000231852:ENST00000471671:exon3:c.G308A:p.R103K,ENSG00000231852:ENST00000478281:exon3:c.G341A:p.R114K	NA	NA	6p21.33	NA	NA	NA	NA	rs6474	0.25	0.25	0.205	0.214856	0.339	0.2173	0.3718	0.0227	0.2331	0.34	0.24	0.4	0.03	0.3341	0.4	0.83	T	0.0	B	0.002	B	0.402	N	1.000	P	.	.	-0.27	T	-1.072	T	0.052	T	0.107	-0.576	1.41	-4.44	-1.185	-1.034	0.523	-0.575885	NA	0.96	0.314535	0.069287	ID=COSM1319109;OCCURENCE=2(haematopoietic_and_lymphoid_tissue)	0.283	CLINSIG=non-pathogenic;CLNDBN=21-hydroxylase_deficiency;CLNREVSTAT=single;CLNACC=RCV000055817.1;CLNDSDB=GeneReviews:MedGen:OMIM;CLNDSDBID=NBK1171:C0852654:201910	10.3456984
617	5	32400266	32400266	A	G	exonic	ZFR	NA	nonsynonymous SNV	ZFR:NM_016107:exon9:c.T1559C:p.I520T	exonic	ENSG00000056097	NA	nonsynonymous SNV	ENSG00000056097:ENST00000265069:exon9:c.T1559C:p.I520T	Score=403;Name=lod=58	NA	5p13.3	NA	NA	NA	NA	rs1051489	0.26	0.26	0.276	0.232827	0.337	0.2698	0.2522	0.0779	0.2832	0.32	0.29	0.31	0.1	0.3087	0.34	0.57	T	0.0	B	0.0	B	0.047	N	1.000	P	-0.345	N	3.58	T	-0.851	T	0.000	T	0.01	1.351	10.44	6.16	2.367	3.036	12.626	1.351153	1.351153	0.49	0.342209	0.11507	NA	0.167	NA	10.3454244
618	22	42341308	42341308	A	G	exonic	CENPM	NA	synonymous SNV	CENPM:NM_001002876:exon4:c.T231C:p.S77S,CENPM:NM_024053:exon4:c.T231C:p.S77S	exonic	ENSG00000100162	NA	nonsynonymous SNV	ENSG00000100162:ENST00000402420:exon3:c.T214C:p.S72P	Score=304;Name=lod=23	NA	22q13.2	NA	NA	NA	NA	rs7293091	0.26	0.26	0.252	0.295927	0.2008	0.123	0.4496	0.3971	0.3262	0.2	0.13	0.42	0.4	0.2556	0.42	0.01	D	.	.	.	.	0.000	D	0.000	P	.	.	.	.	-0.954	T	0.000	T	.	2.715	15.04	1.19	0.148	0.950	9.887	2.714778	2.714778	0	0.19907	0.393781	NA	0.312	NA	10.34453
618	9	78936492	78936492	A	G	exonic	PCSK5	NA	nonsynonymous SNV	PCSK5:NM_001190482:exon30:c.A3958G:p.K1320E	exonic	ENSG00000099139	NA	nonsynonymous SNV	ENSG00000099139:ENST00000424854:exon24:c.A3058G:p.K1020E,ENSG00000099139:ENST00000545128:exon30:c.A3958G:p.K1320E	Score=340;Name=lod=32	NA	9q21.13	Score=837;Name=V$MYCMAX_03	NA	NA	NA	rs1110223	0.31	0.31	0.325	0.31889	0.341	0.1369	0.2378	0.4592	0.3517	0.34	0.13	0.27	0.48	0.3191	0.48	1	T	.	.	.	.	0.020	N	0.000	P	-0.51	N	1.64	T	-0.942	T	0.000	T	0.024	-0.564	1.456	4.78	0.753	2.286	9.362	-0.563675	NA	1	0.329985	0.44121	NA	0.268	NA	10.3432484
618	14	88862529	88862529	G	A	exonic	SPATA7	NA	nonsynonymous SNV	SPATA7:NM_001040428:exon3:c.G124A:p.V42M,SPATA7:NM_018418:exon4:c.G220A:p.V74M	exonic;splicing	ENSG00000042317;ENSG00000042317	ENST00000557248:exon4:c.219+1G>A	nonsynonymous SNV	ENSG00000042317:ENST00000555401:exon2:c.G49A:p.V17M,ENSG00000042317:ENST00000356583:exon3:c.G124A:p.V42M,ENSG00000042317:ENST00000553885:exon3:c.G124A:p.V42M,ENSG00000042317:ENST00000553908:exon3:c.G124A:p.V42M,ENSG00000042317:ENST00000556870:exon3:c.G124A:p.V42M,ENSG00000042317:ENST00000045347:exon4:c.G220A:p.V74M,ENSG00000042317:ENST00000393545:exon4:c.G220A:p.V74M,ENSG00000042317:ENST00000555515:exon4:c.G220A:p.V74M,ENSG00000042317:ENST00000555534:exon4:c.G220A:p.V74M,ENSG00000042317:ENST00000556553:exon4:c.G124A:p.V42M	Score=284;Name=lod=19	NA	14q31.3	Score=791;Name=V$STAT3_01	NA	NA	NA	rs3179969	0.38	0.38	0.407	0.407548	0.3002	0.3621	0.281	0.5749	0.4284	0.31	0.33	0.29	0.58	0.3473	0.58	1	T	0.001	B	0.002	B	0.355	N	1.000	P	-0.745	N	2.34	T	-0.917	T	0.000	T	0.266	1.218	9.944	2.45	-0.020	1.184	3.822	1.218398	NA	0.42	0.34287	0.543804	NA	0.486	NA	10.3429634
618	17	39535859	39535859	A	G	exonic	KRT34	NA	nonsynonymous SNV	KRT34:NM_021013:exon4:c.T839C:p.I280T	exonic	ENSG00000131737	NA	nonsynonymous SNV	ENSG00000131737:ENST00000394001:exon4:c.T839C:p.I280T	Score=535;Name=lod=200	NA	17q21.2	Score=772;Name=V$STAT5A_02	NA	NA	NA	rs2239710	0.72	0.72	0.731	0.744609	0.6451	0.5873	0.6744	0.9682	0.7566	0.66	0.6	0.7	0.95	0.6983	0.95	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-2.1	N	.	.	-0.978	T	0.000	T	0.046	-1.679	0.012	3.56	1.064	2.515	7.274	-1.67948	NA	0.4	0.651047	0.912392	ID=COSM1383139;OCCURENCE=1(large_intestine)	0.826	NA	10.3388864
618	9	100995721	100995721	A	G	exonic	TBC1D2	NA	nonsynonymous SNV	TBC1D2:NM_001267571:exon4:c.T758C:p.L253S,TBC1D2:NM_018421:exon4:c.T758C:p.L253S	exonic	ENSG00000095383	NA	nonsynonymous SNV	ENSG00000095383:ENST00000342112:exon3:c.T104C:p.L35S,ENSG00000095383:ENST00000375064:exon4:c.T758C:p.L253S,ENSG00000095383:ENST00000375066:exon4:c.T758C:p.L253S	NA	NA	9q22.33	Score=809;Name=V$HNF4_01	NA	NA	NA	rs879369	0.4	0.4	0.436	0.41234	0.339	0.1756	0.3372	0.8011	0.2597	0.36	0.17	0.36	0.78	0.3402	0.78	0.47	T	0.004	B	0.002	B	0.135	N	1.000	P	1.085	L	3.15	T	-0.984	T	0.000	T	0.021	-2.119	0.006	-5.96	-2.065	-1.964	15.990	-2.118793	NA	0.27	0.317442	0.735361	NA	0.478	NA	10.3366914
618	7	100608884	100608884	G	A	intergenic	ACHE,MUC12	dist=115343;dist=4020	NA	NA	exonic	ENSG00000169894	NA	nonsynonymous SNV	ENSG00000169894:ENST00000422757:exon6:c.G733A:p.A245T,ENSG00000169894:ENST00000319509:exon7:c.G2263A:p.A755T	NA	NA	7q22.1	NA	Name=HMGN3,GABP,E2F6_(H-50),ETS1,E2F6,Rad21,CTCF,Sin3Ak-20,HDAC2_(SC-6296),ZBTB7A_(SC-34508),c-Myc,USF-1	Name=5	NA	rs73163797	NA	NA	NA	0.000199681	NA	0.001	NA	NA	NA	NA	NA	NA	NA	0.4981	0.011	0.76	T	0.279	B	0.015	B	.	.	1.000	N	-0.145	N	0.99	T	-1.014	T	0.030	T	0.037	-0.858	0.53	-4.34	-1.380	-2.604	3.284	-0.858257	NA	0.59	NA	NA	ID=COSM86682,COSM1547618;OCCURENCE=1(ovary),1(lung)	0.007	NA	10.3352334
619	17	21319007	21319007	G	A	exonic	KCNJ12,KCNJ18	NA	nonsynonymous SNV	KCNJ18:NM_001194958:exon3:c.G353A:p.R118Q,KCNJ12:NM_021012:exon3:c.G353A:p.R118Q	exonic	ENSG00000184185	NA	nonsynonymous SNV	ENSG00000184185:ENST00000331718:exon3:c.G353A:p.R118Q,ENSG00000184185:ENST00000583088:exon3:c.G353A:p.R118Q	NA	NA	17p11.2	Score=858;Name=V$AP4_01	NA	NA	NA	rs1657740	NA	NA	NA	0.498203	0.5	0.5	0.5	0.4939	0.499	NA	NA	NA	NA	0.4994	NA	0.58	T	0.216	B	0.108	B	0.309	N	1.000	N	-0.345	N	-3.25	D	-0.463	T	0.428	T	0.092	0.334	5.809	-2.04	-0.020	1.199	5.726	0.333536	NA	0.61	NA	NA	ID=COSM1630088;OCCURENCE=1(liver)	NA	NA	10.3339334
619	20	9543622	9543622	C	T	exonic	PAK7	NA	nonsynonymous SNV	PAK7:NM_177990:exon6:c.G1532A:p.S511N,PAK7:NM_020341:exon7:c.G1532A:p.S511N	exonic	ENSG00000101349	NA	nonsynonymous SNV	ENSG00000101349:ENST00000353224:exon6:c.G1532A:p.S511N,ENSG00000101349:ENST00000378423:exon7:c.G1532A:p.S511N,ENSG00000101349:ENST00000378429:exon7:c.G1532A:p.S511N	Score=529;Name=lod=189	NA	20p12.2	NA	NA	NA	NA	rs2297345	0.52	0.52	0.542	0.514577	0.3151	0.5427	0.3833	0.8782	0.2924	0.31	0.55	0.41	0.87	0.3759	0.87	.	.	0.0	B	0.002	B	0.000	N	0.910	P	0.99	L	2.57	T	-1.057	T	0.000	T	0.047	1.138	9.638	5.87	1.158	6.239	12.329	1.138248	NA	1	0.308605	0.790513	NA	0.493	NA	10.3337284
619	3	167248948	167248948	T	C	exonic	WDR49	NA	nonsynonymous SNV	WDR49:NM_178824:exon9:c.A1117G:p.M373V	exonic	ENSG00000174776	NA	nonsynonymous SNV	ENSG00000174776:ENST00000476376:exon7:c.A592G:p.M198V,ENSG00000174776:ENST00000308378:exon9:c.A1117G:p.M373V,ENSG00000174776:ENST00000453925:exon9:c.A1309G:p.M437V	Score=431;Name=lod=75	NA	3q26.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.43	T	0.008	B	0.001	B	0.081	N	1.000	N	0.925	L	1.63	T	-1.032	T	0.066	T	0.248	-0.546	1.524	3.15	0.398	0.888	7.950	-0.546232	NA	0.12	NA	NA	NA	NA	NA	10.3333334
619	4	169393005	169393005	C	T	exonic	DDX60L	NA	nonsynonymous SNV	DDX60L:NM_001012967:exon4:c.G157A:p.V53I	exonic	ENSG00000181381	NA	nonsynonymous SNV	ENSG00000181381:ENST00000260184:exon4:c.G157A:p.V53I,ENSG00000181381:ENST00000505696:exon4:c.G157A:p.V53I,ENSG00000181381:ENST00000505890:exon4:c.G157A:p.V53I,ENSG00000181381:ENST00000511577:exon4:c.G157A:p.V53I,ENSG00000181381:ENST00000512371:exon4:c.G157A:p.V53I,ENSG00000181381:ENST00000514748:exon5:c.G157A:p.V53I	NA	NA	4q32.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.07	T	0.341	B	0.124	B	0.643	U	1.000	N	1.1	L	2.3	T	-1.024	T	0.035	T	0.187	2.264	13.53	2.31	0.176	4.759	9.113	2.264016	2.264016	0.02	NA	NA	NA	NA	NA	10.3333334
619	6	126210903	126210903	G	T	exonic	NCOA7	NA	nonsynonymous SNV	NCOA7:NM_001199621:exon8:c.G1358T:p.G453V,NCOA7:NM_001122842:exon9:c.G1670T:p.G557V,NCOA7:NM_181782:exon9:c.G1703T:p.G568V,NCOA7:NM_001199619:exon10:c.G1703T:p.G568V,NCOA7:NM_001199620:exon11:c.G1703T:p.G568V	exonic	ENSG00000111912	NA	nonsynonymous SNV	ENSG00000111912:ENST00000413085:exon3:c.G1097T:p.G366V,ENSG00000111912:ENST00000229634:exon8:c.G1358T:p.G453V,ENSG00000111912:ENST00000392477:exon9:c.G1703T:p.G568V,ENSG00000111912:ENST00000368357:exon10:c.G1703T:p.G568V	NA	NA	6q22.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.23	T	0.1	B	0.054	B	0.283	N	1.000	N	0.805	L	1.46	T	-1.028	T	0.018	T	0.428	-0.697	0.983	2.66	1.434	0.677	4.318	-0.696532	NA	0	NA	NA	NA	NA	NA	10.3333334
619	7	48545976	48545976	A	G	exonic	ABCA13	NA	nonsynonymous SNV	ABCA13:NM_152701:exon49:c.A13336G:p.K4446E	exonic	ENSG00000179869	NA	nonsynonymous SNV	ENSG00000179869:ENST00000411975:exon6:c.A655G:p.K219E,ENSG00000179869:ENST00000544596:exon6:c.A526G:p.K176E,ENSG00000179869:ENST00000435803:exon49:c.A13336G:p.K4446E	Score=436;Name=lod=79	NA	7p12.3	NA	NA	NA	NA	rs6583448	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-2.5	N	-2.24	D	-0.939	T	0.000	T	0.272	-1.009	0.247	5.04	1.122	4.263	11.109	-1.00949	NA	1	NA	NA	NA	1	NA	10.3333334
619	8	30706055	30706055	G	C	exonic	TEX15	NA	nonsynonymous SNV	TEX15:NM_031271:exon1:c.C479G:p.S160C	exonic	ENSG00000133863	NA	nonsynonymous SNV	ENSG00000133863:ENST00000256246:exon1:c.C479G:p.S160C	NA	NA	8p12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	D	0.004	B	0.006	B	0.082	N	1.000	N	-0.11	N	2.82	T	-1.004	T	0.010	T	0.1	1.374	10.52	-3.57	-0.583	-0.485	0.367	1.374262	1.374262	0.18	NA	NA	NA	NA	NA	10.3333334
619	1	235602095	235602095	G	C	exonic	TBCE	NA	nonsynonymous SNV	TBCE:NM_001079515:exon13:c.G1128C:p.E376D,TBCE:NM_003193:exon13:c.G1128C:p.E376D	exonic	ENSG00000116957	NA	nonsynonymous SNV	ENSG00000116957:ENST00000366601:exon13:c.G1128C:p.E376D,ENSG00000116957:ENST00000406207:exon13:c.G1128C:p.E376D,ENSG00000116957:ENST00000543662:exon14:c.G1281C:p.E427D	Score=389;Name=lod=51	NA	1q42.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000008239	NA	0.62	T	0.001	B	0.003	B	0.024	N	0.720	N	1.24	L	1.93	T	-1.028	T	0.040	T	0.16	0.322	5.748	2.56	0.906	-0.018	7.561	0.322375	NA	0.47	NA	NA	NA	NA	NA	10.3333252
619	8	145112442	145112442	G	A	exonic	OPLAH	NA	nonsynonymous SNV	OPLAH:NM_017570:exon10:c.C1331T:p.P444L	exonic	ENSG00000178814	NA	nonsynonymous SNV	ENSG00000178814:ENST00000426825:exon10:c.C1331T:p.P444L	NA	NA	8q24.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000039	NA	0.27	T	0.009	B	0.007	B	0.101	N	0.980	N	.	.	.	.	-0.900	T	0.106	T	0.245	2.496	14.3	3.2	2.025	-0.012	12.217	2.495536	2.495536	0.28	NA	NA	NA	NA	NA	10.3332944
619	15	56385886	56385886	T	C	exonic	RFX7	NA	nonsynonymous SNV	RFX7:NM_022841:exon9:c.A4040G:p.N1347S	exonic	ENSG00000181827	NA	nonsynonymous SNV	ENSG00000181827:ENST00000559847:exon7:c.A3749G:p.N1250S,ENSG00000181827:ENST00000317318:exon9:c.A4040G:p.N1347S,ENSG00000181827:ENST00000422057:exon9:c.A3749G:p.N1250S,ENSG00000181827:ENST00000423270:exon9:c.A4040G:p.N1347S,ENSG00000181827:ENST00000559447:exon9:c.A3749G:p.N1250S	Score=696;Name=lod=901	NA	15q21.3	NA	NA	NA	NA	rs375177046	NA	NA	NA	0.000199681	NA	NA	NA	0.0008	NA	NA	NA	NA	NA	0.00009958	0.0003	0.75	T	0.0	B	0.0	B	0.031	N	0.507	N	-0.55	N	0.77	T	-1.018	T	0.039	T	0.044	-1.133	0.115	-8.18	-1.633	-0.341	16.183	-1.132757	NA	0.82	0	0.000262	NA	NA	NA	10.3332338
619	1	175049305	175049305	C	A	exonic	TNN	NA	nonsynonymous SNV	TNN:NM_022093:exon4:c.C791A:p.T264N	exonic	ENSG00000120332	NA	nonsynonymous SNV	ENSG00000120332:ENST00000239462:exon4:c.C791A:p.T264N	NA	NA	1q25.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0001	NA	0.09	T	0.04	B	0.063	B	0.306	N	1.000	N	0.6	N	3.97	T	-0.954	T	0.011	T	0.044	2.004	12.66	3.7	0.704	1.392	12.292	2.004075	2.004075	0.03	NA	NA	NA	NA	NA	10.3332334
619	19	11486643	11486643	C	G	exonic	SWSAP1	NA	nonsynonymous SNV	SWSAP1:NM_175871:exon2:c.C641G:p.A214G	exonic	ENSG00000173928	NA	nonsynonymous SNV	ENSG00000173928:ENST00000312423:exon2:c.C641G:p.A214G	NA	NA	19p13.2	NA	Name=Pol2	NA	NA	rs150033461	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0002	NA	0.12	T	0.164	B	0.027	B	0.527	N	1.000	N	0.895	L	0.86	T	-1.034	T	0.076	T	0.062	2.15	13.15	2.86	1.051	0.002	3.343	2.150013	2.150013	0.05	NA	NA	NA	NA	NA	10.3331334
619	10	126715565	126715565	C	T	exonic	CTBP2	NA	nonsynonymous SNV	CTBP2:NM_022802:exon1:c.G764A:p.R255H	exonic	ENSG00000175029	NA	nonsynonymous SNV	ENSG00000175029:ENST00000309035:exon1:c.G764A:p.R255H	NA	NA	10q26.13	NA	NA	NA	NA	rs143281706	NA	NA	NA	0.000199681	NA	NA	NA	NA	0.001	NA	NA	NA	NA	0.00009146	0.0001	0	D	0.957	D	0.312	B	0.491	N	1.000	N	.	.	-1.7	D	-0.635	T	0.336	T	0.219	1.344	10.42	1.45	0.204	0.040	2.657	1.343945	1.343945	0	0.000116	0	NA	NA	NA	10.3331259
619	20	744428	744428	G	A	exonic	SLC52A3	NA	nonsynonymous SNV	SLC52A3:NM_033409:exon3:c.C787T:p.H263Y	exonic	ENSG00000101276	NA	nonsynonymous SNV	ENSG00000101276:ENST00000217254:exon3:c.C787T:p.H263Y,ENSG00000101276:ENST00000381944:exon3:c.C787T:p.H263Y	Score=333;Name=lod=30	NA	20p13	Score=847;Name=V$ER_Q6	NA	NA	NA	rs150159842	NA	NA	NA	0.000998403	NA	NA	0.0072	NA	NA	NA	NA	NA	NA	0.0002	0.0002	0.05	D	0.003	B	0.003	B	0.875	N	1.000	N	1.39	L	-0.59	T	-0.884	T	0.211	T	0.038	1.788	11.94	-0.151	0.077	0.503	4.446	1.788492	1.788492	0.04	0.000116	0.000227	NA	NA	NA	10.3330174
619	22	50298100	50298100	G	C	exonic	ALG12	NA	nonsynonymous SNV	ALG12:NM_024105:exon8:c.C1047G:p.I349M	exonic	ENSG00000182858	NA	nonsynonymous SNV	ENSG00000182858:ENST00000330817:exon8:c.C1047G:p.I349M	NA	NA	22q13.33	NA	NA	NA	NA	rs182006999	NA	NA	NA	0.000399361	NA	NA	NA	NA	0.002	NA	NA	NA	NA	0.0003	0.0001	0.12	T	0.26	B	0.207	B	0.400	N	1.000	N	1.33	L	-0.07	T	-1.077	T	0.061	T	0.235	-0.482	1.783	-9.54	-4.196	-4.606	1.528	-0.481512	NA	0.04	0.000116	0	NA	NA	NA	10.3329174
619	9	125673569	125673569	C	G	exonic	ZBTB6	NA	nonsynonymous SNV	ZBTB6:NM_006626:exon2:c.G783C:p.E261D	exonic	ENSG00000186130	NA	nonsynonymous SNV	ENSG00000186130:ENST00000373659:exon2:c.G783C:p.E261D	Score=608;Name=lod=394	NA	9q33.2	NA	NA	NA	NA	rs143894946	0.0005	0.0005	NA	0.000199681	NA	NA	0.0014	NA	NA	NA	NA	0.0028	NA	0.0002	0.0028	0.23	T	0.048	B	0.027	B	0.000	D	0.981	D	1.645	L	2.95	T	-1.040	T	0.024	T	0.716	1.612	11.35	-0.222	-0.008	0.800	10.387	1.612424	1.612424	0.07	0.000233	0	NA	NA	NA	10.3329004
619	10	101639648	101639648	C	T	exonic	DNMBP	NA	nonsynonymous SNV	DNMBP:NM_015221:exon16:c.G4468A:p.V1490I	exonic	ENSG00000107554	NA	nonsynonymous SNV	ENSG00000107554:ENST00000540316:exon8:c.G1276A:p.V426I,ENSG00000107554:ENST00000543621:exon13:c.G2206A:p.V736I,ENSG00000107554:ENST00000324109:exon16:c.G4468A:p.V1490I,ENSG00000107554:ENST00000342239:exon16:c.G4540A:p.V1514I	NA	NA	10q24.2	NA	NA	NA	NA	rs199968530	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0003	0.0003	0.48	T	0.001	B	0.001	B	0.184	N	1.000	N	0.345	N	2.8	T	-1.071	T	0.038	T	0.058	1.458	10.82	-9.7	-1.438	-5.963	5.072	1.458087	1.458087	0.68	0.000349	0	NA	NA	NA	10.3326844
619	19	39915896	39915896	A	G	exonic	PLEKHG2	NA	nonsynonymous SNV	PLEKHG2:NM_022835:exon19:c.A4123G:p.R1375G	exonic	ENSG00000090924	NA	nonsynonymous SNV	ENSG00000090924:ENST00000600210:exon3:c.A274G:p.R92G,ENSG00000090924:ENST00000596443:exon5:c.A310G:p.R104G,ENSG00000090924:ENST00000425673:exon17:c.A4036G:p.R1346G,ENSG00000090924:ENST00000378550:exon18:c.A1696G:p.R566G,ENSG00000090924:ENST00000409797:exon18:c.A1696G:p.R566G,ENSG00000090924:ENST00000409794:exon19:c.A4123G:p.R1375G	Score=333;Name=lod=30	NA	19q13.2	Score=846;Name=V$NFKB_C	Name=Pol2	NA	NA	rs199999525	NA	NA	NA	0.000798722	NA	NA	0.0058	NA	NA	NA	NA	NA	NA	0.0003	0.0004	.	.	0.005	B	0.011	B	0.083	N	0.977	N	1.185	L	-0.56	T	-0.982	T	0.183	T	0.448	1.914	12.36	1.57	0.265	0.641	6.420	1.913548	1.913548	0.13	0.000356	0	NA	NA	NA	10.3326774
619	11	57886441	57886441	C	T	exonic	OR9I1	NA	nonsynonymous SNV	OR9I1:NM_001005211:exon1:c.G476A:p.R159H	exonic	ENSG00000172377	NA	nonsynonymous SNV	ENSG00000172377:ENST00000302610:exon1:c.G476A:p.R159H	NA	NA	11q12.1	NA	NA	NA	NA	rs139300657	0.0005	0.0005	NA	0.000199681	NA	NA	0.0014	NA	NA	NA	NA	0.0028	NA	0.0003	0.0028	1	T	0.429	B	0.099	B	0.000	D	1.000	N	-0.915	N	9.1	T	-1.099	T	0.000	T	0.147	-0.802	0.672	4.03	1.433	0.034	7.138	-0.801673	NA	0.71	0.000582	0.000227	ID=COSM415544;OCCURENCE=1(urinary_tract)	NA	NA	10.3324514
619	6	24843131	24843131	C	T	exonic	FAM65B	NA	nonsynonymous SNV	FAM65B:NM_015864:exon13:c.G1729A:p.D577N,FAM65B:NM_014722:exon14:c.G1879A:p.D627N	exonic	ENSG00000111913	NA	nonsynonymous SNV	ENSG00000111913:ENST00000378023:exon13:c.G1729A:p.D577N,ENSG00000111913:ENST00000510784:exon13:c.G1831A:p.D611N,ENSG00000111913:ENST00000538035:exon13:c.G1816A:p.D606N,ENSG00000111913:ENST00000540914:exon13:c.G1729A:p.D577N,ENSG00000111913:ENST00000259698:exon14:c.G1879A:p.D627N	Score=516;Name=lod=166	NA	6p22.3	NA	NA	NA	NA	rs201962345	0.0005	0.0005	NA	0.000199681	NA	NA	0.0014	NA	NA	NA	NA	0.0028	NA	0.0003	0.0028	0.41	T	0.069	B	0.039	B	0.035	N	0.999	D	1.24	L	1.32	T	-1.087	T	0.029	T	0.036	2.801	15.33	1.96	0.607	2.841	9.142	2.801008	2.801008	0.01	0.000732	0	NA	NA	NA	10.3323014
619	22	17669306	17669306	T	C	exonic	CECR1	NA	nonsynonymous SNV	CECR1:NM_177405:exon4:c.A281G:p.H94R,CECR1:NM_017424:exon6:c.A1004G:p.H335R	exonic	ENSG00000093072	NA	nonsynonymous SNV	ENSG00000093072:ENST00000330232:exon4:c.A281G:p.H94R,ENSG00000093072:ENST00000262607:exon6:c.A1004G:p.H335R,ENSG00000093072:ENST00000399837:exon7:c.A1004G:p.H335R,ENSG00000093072:ENST00000399839:exon7:c.A1004G:p.H335R,ENSG00000093072:ENST00000449907:exon7:c.A878G:p.H293R	Score=251;Name=lod=14	NA	22q11.1	NA	Name=CTCF	NA	NA	rs2231495	0.33	0.33	0.337	0.364617	0.3211	0.2262	0.3156	0.5696	0.3098	0.33	0.21	0.27	0.52	0.3473	0.55	0.34	T	0.237	B	0.015	B	0.006	N	1.000	P	-0.315	N	-1.54	D	-0.919	T	0.000	T	0.09	-0.326	2.455	0.283	0.033	2.520	2.398	-0.325573	NA	0.32	0.333023	0.547208	NA	0.399	NA	10.3319104
619	19	10800258	10800258	C	T	UTR3	ILF3	NM_017620:c.*270C>T,NM_012218:c.*270C>T	NA	NA	UTR3	ENSG00000129351	ENST00000318511:c.*270C>T,ENST00000449870:c.*270C>T,ENST00000590261:c.*270C>T	NA	NA	Score=374;Name=lod=44	NA	19p13.2	NA	NA	NA	NA	rs201258602	NA	NA	NA	0.000399361	0.002	NA	NA	NA	NA	NA	NA	NA	NA	0.0005	NA	0	D	.	.	.	.	.	.	1.000	D	.	.	.	.	-0.487	T	0.286	T	.	2.294	13.63	4.22	1.392	0.398	10.399	2.293786	2.293786	0	NA	NA	NA	NA	NA	10.3308334
619	2	219695487	219695487	G	C	exonic	PRKAG3	NA	nonsynonymous SNV	PRKAG3:NM_017431:exon3:c.C211G:p.P71A	exonic	ENSG00000115592	NA	nonsynonymous SNV	ENSG00000115592:ENST00000233944:exon3:c.C211G:p.P71A,ENSG00000115592:ENST00000392098:exon3:c.C211G:p.P71A,ENSG00000115592:ENST00000430489:exon3:c.C211G:p.P71A,ENSG00000115592:ENST00000439262:exon3:c.C136G:p.P46A,ENSG00000115592:ENST00000470307:exon3:c.C211G:p.P71A,ENSG00000115592:ENST00000529249:exon3:c.C211G:p.P71A	NA	NA	2q35	NA	NA	NA	NA	rs692243	0.21	0.21	0.195	0.18131	0.1471	0.4018	0.1758	0.0605	0.1564	0.16	0.4	0.15	0.1	0.1784	0.4	0.46	T	0.993	D	0.778	P	0.045	N	1.000	P	0.805	L	0.79	T	-1.022	T	0.000	T	0.154	1.934	12.42	1.91	0.992	1.419	5.055	1.933641	1.933641	0.06	0.17814	0.082842	NA	0.159	NA	10.3296934
619	19	22156433	22156433	A	C	exonic	ZNF208	NA	nonsynonymous SNV	ZNF208:NM_007153:exon4:c.T1403G:p.L468R	exonic	ENSG00000160321	NA	nonsynonymous SNV	ENSG00000160321:ENST00000397126:exon4:c.T1403G:p.L468R	NA	NA	19p12	NA	NA	NA	NA	rs147590661	0.01	0.01	0.004	0.0113818	NA	NA	0.0029	0.0416	NA	NA	NA	0.0028	0.02	0.0035	0.036	0	D	.	.	.	.	.	.	1.000	N	.	.	0.61	T	-1.035	T	0.041	T	0.288	0.778	8.108	2.26	0.824	4.532	8.092	0.778256	NA	NA	0.000353	0.036201	NA	0.007	NA	10.3294804
619	19	22155884	22155884	G	T	exonic	ZNF208	NA	nonsynonymous SNV	ZNF208:NM_007153:exon4:c.C1952A:p.T651N	exonic	ENSG00000160321	NA	nonsynonymous SNV	ENSG00000160321:ENST00000397126:exon4:c.C1952A:p.T651N	NA	NA	19p12	NA	NA	NA	NA	rs148696573	0.01	0.01	0.003	0.0115815	NA	NA	0.0029	0.0424	NA	NA	NA	0.0028	0.02	0.0038	0.038	0.57	T	0.425	B	0.241	B	.	.	1.000	N	.	.	1.31	T	-1.112	T	0.012	T	0.023	-3.003	0.001	-4.98	-4.359	-9.131	3.369	-3.003217	NA	0.95	0.000469	0.038316	NA	NA	NA	10.3290644
619	15	43568715	43568715	T	C	exonic	TGM7	NA	nonsynonymous SNV	TGM7:NM_052955:exon13:c.A2071G:p.N691D	exonic	ENSG00000159495	NA	nonsynonymous SNV	ENSG00000159495:ENST00000452443:exon13:c.A2071G:p.N691D	Score=507;Name=lod=154	NA	15q15.2	NA	NA	NA	NA	rs148274809	0.0009	0.0009	0.001	0.000599042	0.001	NA	0.0014	NA	0.001	0.0013	NA	0.0028	NA	0.0018	0.011	1	T	0.003	B	0.007	B	0.336	N	0.951	N	0.915	L	-0.19	T	-0.993	T	0.122	T	0.097	2.343	13.79	3.3	0.647	1.305	8.539	2.343238	2.343238	0.54	0.001861	0.000227	NA	0.007	NA	10.3286724
619	10	115350597	115350597	G	A	exonic	NRAP	NA	nonsynonymous SNV	NRAP:NM_006175:exon39:c.C4591T:p.R1531C,NRAP:NM_001261463:exon40:c.C4696T:p.R1566C,NRAP:NM_198060:exon40:c.C4696T:p.R1566C	exonic	ENSG00000197893	NA	nonsynonymous SNV	ENSG00000197893:ENST00000360478:exon39:c.C4591T:p.R1531C,ENSG00000197893:ENST00000369360:exon39:c.C4615T:p.R1539C,ENSG00000197893:ENST00000359988:exon40:c.C4696T:p.R1566C,ENSG00000197893:ENST00000369358:exon40:c.C4720T:p.R1574C	Score=575;Name=lod=289	NA	10q25.3	NA	NA	NA	NA	rs1885434	0.35	0.35	0.339	0.360024	0.3042	0.2996	0.4683	0.4221	0.319	0.3	0.33	0.41	0.42	0.3535	0.42	0.07	T	0.035	B	0.019	B	0.001	N	0.000	P	2.065	M	2.4	T	-0.956	T	0.000	T	0.328	2.523	14.4	3.83	0.756	3.514	11.877	2.522821	2.522821	0.03	0.348372	0.407853	NA	0.297	NA	10.3272614
619	19	22155922	22155922	T	A	exonic	ZNF208	NA	nonsynonymous SNV	ZNF208:NM_007153:exon4:c.A1914T:p.K638N	exonic	ENSG00000160321	NA	nonsynonymous SNV	ENSG00000160321:ENST00000397126:exon4:c.A1914T:p.K638N	NA	NA	19p12	NA	NA	NA	NA	rs151216289	0.01	0.01	0.008	0.0179712	NA	NA	0.0043	0.0658	NA	NA	NA	0.0028	0.04	0.0058	0.058	0.1	T	1.0	D	0.99	D	.	.	1.000	N	.	.	0.36	T	-1.026	T	0.040	T	0.02	1.457	10.82	1.42	-0.058	-2.827	2.304	1.456902	1.456902	0.01	0.00047	0.057512	NA	NA	NA	10.3270634
619	5	94826655	94826655	C	A	exonic	TTC37	NA	nonsynonymous SNV	TTC37:NM_014639:exon37:c.G3888T:p.R1296S	exonic	ENSG00000198677	NA	nonsynonymous SNV	ENSG00000198677:ENST00000358746:exon37:c.G3888T:p.R1296S	Score=415;Name=lod=65	NA	5q15	NA	NA	NA	NA	rs2303650	0.21	0.21	0.211	0.227436	0.165	0.12	0.1787	0.4024	0.2004	0.16	0.13	0.2	0.38	0.1824	0.38	0.48	T	0.704	P	0.231	B	0.000	N	0.117	P	1.04	L	-1.18	T	-0.994	T	0.000	T	0.174	2.837	15.45	3.23	0.398	1.310	5.884	2.836743	2.836743	0.04	0.158953	0.374035	NA	0.254	NA	10.3269804
619	12	123187313	123187313	C	G	exonic	HCAR2	NA	nonsynonymous SNV	HCAR2:NM_177551:exon1:c.G518C:p.G173A	exonic	ENSG00000182782	NA	nonsynonymous SNV	ENSG00000182782:ENST00000328880:exon1:c.G518C:p.G173A	NA	NA	12q24.31	Score=815;Name=V$CDPCR3_01	NA	NA	NA	rs144376493	NA	NA	NA	0.00119808	0.005	NA	0.0014	NA	NA	NA	NA	NA	NA	0.0018	NA	0.3	T	0.008	B	0.016	B	0.324	N	1.000	N	1.15	L	1.06	T	-1.047	T	0.078	T	0.109	-0.45	1.915	-9.83	-2.003	-0.136	14.223	-0.449758	NA	0.61	NA	NA	NA	NA	NA	10.3265334
619	12	123187314	123187314	C	T	exonic	HCAR2	NA	nonsynonymous SNV	HCAR2:NM_177551:exon1:c.G517A:p.G173S	exonic	ENSG00000182782	NA	nonsynonymous SNV	ENSG00000182782:ENST00000328880:exon1:c.G517A:p.G173S	NA	NA	12q24.31	Score=815;Name=V$CDPCR3_01	NA	NA	NA	rs141052038	NA	NA	NA	0.00119808	0.005	NA	0.0014	NA	NA	NA	NA	NA	NA	0.0019	NA	0.26	T	0.005	B	0.004	B	0.324	N	1.000	N	0.645	N	1.07	T	-1.063	T	0.047	T	0.14	-0.363	2.29	-10.5	-2.694	-1.276	1.363	-0.362698	NA	0.6	NA	NA	NA	NA	NA	10.3264334
619	22	42486723	42486723	G	A	exonic	NDUFA6	NA	nonsynonymous SNV	NDUFA6:NM_002490:exon1:c.C104T:p.A35V	exonic	ENSG00000184983	NA	nonsynonymous SNV	ENSG00000184983:ENST00000498737:exon1:c.C104T:p.A35V,ENSG00000184983:ENST00000602404:exon1:c.C26T:p.A9V	NA	NA	22q13.2	NA	Name=GTF2F1_(RAP-74),Oct-2,Max,YY1_(C-20),BCLAF1_(M33-P5B11),TAF7_(SQ-8),Pol2,Pol2(phosphoS2),POU2F2,TAF1,E2F6_(H-50),NF-YA,TBP,IRF1,GTF2B,c-Myc,HEY1,Pol2-4H8,YY1,Pol2(b)	NA	NA	rs1801311	0.33	0.33	0.341	0.353834	0.335	0.1508	0.3271	0.5371	0.3538	0.33	0.17	0.32	0.55	0.3372	0.55	0.1	T	0.024	B	0.005	B	0.000	D	0.000	P	0.235	N	-0.42	T	-0.929	T	0.000	T	0.071	3.197	16.7	2.39	0.720	1.568	5.860	3.196846	3.196846	0.18	0.33593	0.493418	NA	0.362	NA	10.3252034
620	2	130931095	130931095	G	A	exonic	SMPD4	NA	synonymous SNV	SMPD4:NM_017751:exon4:c.C378T:p.L126L,SMPD4:NM_017951:exon4:c.C378T:p.L126L	exonic	ENSG00000136699	NA	stopgain	ENSG00000136699:ENST00000339679:exon4:c.C115T:p.R39X	Score=448;Name=lod=88	NA	2q21.1	NA	NA	NA	NA	rs145230616	0.0032	0.0032	0.004	0.00638978	0.004	NA	0.0043	0.0038	0.0204	0.004	NA	0.01	0.0041	0.004	0.011	0.92	T	.	.	.	.	.	.	1.000	D	.	.	.	.	.	.	.	.	.	4.102	21.1	-4.12	-0.677	0.362	1.129	4.102182	4.102182	1	0.001163	0.00227	NA	0.007	NA	10.3241703
620	3	39307832	39307832	T	C	exonic	CX3CR1	NA	nonsynonymous SNV	CX3CR1:NM_001171171:exon2:c.A169G:p.T57A,CX3CR1:NM_001171172:exon2:c.A169G:p.T57A,CX3CR1:NM_001171174:exon2:c.A265G:p.T89A,CX3CR1:NM_001337:exon2:c.A169G:p.T57A	exonic	ENSG00000168329	NA	nonsynonymous SNV	ENSG00000168329:ENST00000358309:exon2:c.A265G:p.T89A,ENSG00000168329:ENST00000399220:exon2:c.A169G:p.T57A,ENSG00000168329:ENST00000412814:exon2:c.A169G:p.T57A,ENSG00000168329:ENST00000435290:exon2:c.A169G:p.T57A,ENSG00000168329:ENST00000541347:exon2:c.A169G:p.T57A,ENSG00000168329:ENST00000542107:exon2:c.A169G:p.T57A	NA	NA	3p22.2	Score=790;Name=V$CMYB_01	NA	NA	NA	rs199811198	NA	NA	NA	0.000798722	0.003	NA	NA	NA	0.001	NA	NA	NA	NA	0.0029	0.0041	0	D	0.166	B	0.096	B	0.204	N	1.000	N	0.41	N	1.22	T	-1.029	T	0.054	T	0.205	1.992	12.62	4.23	0.897	-0.084	6.122	1.991676	1.991676	0.1	0.004063	0.000248	NA	NA	NA	10.3233704
620	4	70146423	70146423	G	A	exonic	UGT2B28	NA	nonsynonymous SNV	UGT2B28:NM_001207004:exon1:c.G205A:p.A69T,UGT2B28:NM_053039:exon1:c.G205A:p.A69T	exonic	ENSG00000135226	NA	nonsynonymous SNV	ENSG00000135226:ENST00000335568:exon1:c.G205A:p.A69T,ENSG00000135226:ENST00000511240:exon1:c.G205A:p.A69T	NA	NA	4q13.2	NA	NA	NA	NA	rs150261084	0.0023	0.0023	0.002	0.00139776	0.002	NA	0.0058	0.0008	NA	0.0026	NA	0.01	NA	0.0032	0.01	0.62	T	0.24	B	0.102	B	0.190	U	1.000	N	-0.345	N	0.06	T	-1.041	T	0.045	T	0.029	-2.019	0.006	-4.36	-4.831	-7.778	1.429	-2.019228	NA	0.53	0.005432	0.001719	NA	NA	NA	10.3227014
620	15	81592746	81592746	T	A	exonic	IL16	NA	nonsynonymous SNV	IL16:NM_004513:exon2:c.T976A:p.S326T,IL16:NM_172217:exon13:c.T3079A:p.S1027T,IL16:NM_001172128:exon14:c.T3079A:p.S1027T	exonic	ENSG00000172349	NA	nonsynonymous SNV	ENSG00000172349:ENST00000394652:exon2:c.T976A:p.S326T,ENSG00000172349:ENST00000302987:exon13:c.T3079A:p.S1027T,ENSG00000172349:ENST00000394660:exon14:c.T3079A:p.S1027T,ENSG00000172349:ENST00000559388:exon16:c.T2941A:p.S981T	NA	NA	15q25.1	NA	NA	NA	NA	rs34101586	0.03	0.03	0.024	0.0305511	0.001	NA	0.0115	0.1089	NA	NA	NA	0.02	0.1	0.0094	0.1	0.89	T	0.304	B	0.05	B	0.277	N	1.000	N	0.895	L	3.37	T	-0.997	T	0.001	T	0.108	1.254	10.09	-7.93	-1.675	-1.191	10.752	1.253775	1.253775	0.82	0.000349	0.097594	NA	0.029	NA	10.3225844
620	11	68747507	68747507	T	G	exonic	MRGPRD	NA	nonsynonymous SNV	MRGPRD:NM_198923:exon1:c.A949C:p.N317H	exonic	ENSG00000172938	NA	nonsynonymous SNV	ENSG00000172938:ENST00000309106:exon1:c.A949C:p.N317H	NA	NA	11q13.3	NA	Name=ELF1_(SC-631)	NA	NA	rs143309852	0.0027	0.0027	NA	0.00259585	0.004	NA	0.0043	0.0008	0.0051	0.01	NA	0.0028	0.002	0.0038	0.01	0.19	T	0.007	B	0.004	B	0.030	U	1.000	N	1.495	L	3.76	T	-1.009	T	0.010	T	0.118	1.234	10.01	-9.11	-1.649	0.162	9.018	1.233728	1.233728	0.04	0.003697	0.001205	NA	NA	NA	10.3218364
620	5	7878179	7878179	C	T	exonic	MTRR	NA	nonsynonymous SNV	MTRR:NM_002454:exon5:c.C524T:p.S175L,MTRR:NM_024010:exon5:c.C605T:p.S202L	exonic	ENSG00000124275	NA	nonsynonymous SNV	ENSG00000124275:ENST00000264668:exon5:c.C605T:p.S202L,ENSG00000124275:ENST00000440940:exon5:c.C524T:p.S175L	NA	NA	5p15.31	Score=781;Name=V$HEN1_02	NA	Name=46	NA	rs1532268	0.25	0.25	0.27	0.269968	0.336	0.129	0.2147	0.2708	0.3855	0.34	0.1	0.23	0.31	0.3155	0.36	0.3	T	0.0	B	0.0	B	0.001	N	1.000	P	0	N	4.37	T	-0.910	T	0.000	T	0.301	0.982	9.011	-10.6	-2.652	-1.590	3.722	0.982408	NA	0.31	0.360116	0.266001	NA	0.203	NA	10.3217174
620	3	171452701	171452701	C	T	exonic	PLD1	NA	nonsynonymous SNV	PLD1:NM_001130081:exon5:c.G494A:p.R165H,PLD1:NM_002662:exon5:c.G494A:p.R165H	exonic	ENSG00000075651	NA	nonsynonymous SNV	ENSG00000075651:ENST00000340989:exon5:c.G494A:p.R165H,ENSG00000075651:ENST00000342215:exon5:c.G494A:p.R165H,ENSG00000075651:ENST00000351298:exon5:c.G494A:p.R165H,ENSG00000075651:ENST00000356327:exon5:c.G494A:p.R165H	NA	NA	3q26.31	NA	NA	NA	NA	rs148972595	0.0027	0.0027	0.003	0.00239617	0.005	NA	0.0072	0.0008	0.001	0.0026	NA	0.01	NA	0.0025	0.01	0.28	T	0.013	B	0.022	B	0.000	N	1.000	N	1.115	L	3.32	T	-1.059	T	0.039	T	0.148	2.181	13.25	4.01	1.436	1.468	9.058	2.181483	2.181483	0.07	0.004419	0.000908	NA	0.007	NA	10.3214144
620	5	181730	181730	C	G	exonic	PLEKHG4B	NA	nonsynonymous SNV	PLEKHG4B:NM_052909:exon17:c.C3436G:p.R1146G	exonic	ENSG00000153404	NA	nonsynonymous SNV	ENSG00000153404:ENST00000283426:exon17:c.C3436G:p.R1146G	Score=395;Name=lod=54	NA	5p15.33	NA	NA	NA	NA	rs12519352	0.32	0.32	0.317	0.33147	0.503	0.256	0.3732	0.0817	0.5409	0.5	0.26	0.39	0.08	0.4659	0.55	0.08	T	0.997	D	0.859	P	.	.	1.000	P	0.345	N	1.17	T	-0.965	T	0.000	T	0.163	0.32	5.732	3.21	1.335	.	7.717	0.319585	NA	0	0.546047	0.163414	NA	0.399	NA	10.3183864
620	1	152281690	152281690	C	T	exonic	FLG	NA	nonsynonymous SNV	FLG:NM_002016:exon3:c.G5672A:p.R1891Q	exonic	ENSG00000143631	NA	nonsynonymous SNV	ENSG00000143631:ENST00000368799:exon3:c.G5672A:p.R1891Q	NA	NA	1q21.3	NA	NA	NA	NA	rs12407748	0.25	0.25	0.197	0.28754	0.1421	0.5843	0.3905	0.0113	0.4315	0.15	0.55	0.31	0.02	0.2286	0.55	0.76	T	0.665	P	0.172	B	.	.	1.000	P	0.315	N	3.96	T	-0.962	T	0.002	T	0.021	0.062	4.339	-3.57	-1.013	-4.006	7.831	0.062313	NA	0.5	0.144419	0.036768	NA	0.109	NA	10.3182144
620	22	36556823	36556823	G	T	exonic	APOL3	NA	nonsynonymous SNV	APOL3:NM_145640:exon1:c.C117A:p.S39R	exonic	ENSG00000128284	NA	nonsynonymous SNV	ENSG00000128284:ENST00000349314:exon1:c.C117A:p.S39R,ENSG00000128284:ENST00000397289:exon1:c.C117A:p.S39R,ENSG00000128284:ENST00000422426:exon1:c.C117A:p.S39R,ENSG00000128284:ENST00000432700:exon1:c.C117A:p.S39R,ENSG00000128284:ENST00000531095:exon1:c.C9A:p.S3R	NA	NA	22q12.3	NA	Name=Pol2-4H8,TBP,IRF1,NFKB,PRDM1_(Val90),Pol2,POU2F2,Oct-2	Name=97	NA	rs132653	0.8	0.8	0.78	0.784744	0.8588	0.9762	0.8919	0.4372	0.9049	0.86	0.97	0.89	0.46	0.8306	0.97	0.05	D	0.976	D	0.447	P	0.005	N	1.000	P	0	N	3.57	T	-0.824	T	0.000	T	0.051	0.512	6.774	-4.25	-0.934	-0.708	0.976	0.511823	NA	0	0.826395	0.500227	NA	0.71	NA	10.3175384
620	19	8171067	8171067	C	T	exonic	FBN3	NA	nonsynonymous SNV	FBN3:NM_032447:exon37:c.G4738A:p.V1580I	exonic	ENSG00000142449	NA	nonsynonymous SNV	ENSG00000142449:ENST00000270509:exon37:c.G4738A:p.V1580I,ENSG00000142449:ENST00000600128:exon38:c.G4738A:p.V1580I,ENSG00000142449:ENST00000601739:exon38:c.G4738A:p.V1580I	Score=572;Name=lod=281	NA	19p13.2	NA	NA	NA	NA	rs151274163	0.0023	0.0023	0.002	0.000998403	0.005	NA	NA	NA	NA	0.01	NA	NA	NA	0.0058	0.01	1	T	0.0	B	0.0	B	0.023	N	0.994	N	0.475	N	-3.77	D	-0.509	T	0.512	D	0.051	-1.831	0.009	-0.849	-0.252	-0.293	11.606	-1.830866	NA	1	0.005465	0.002724	ID=COSM1157870;OCCURENCE=1(pancreas)	NA	NA	10.3170684
620	2	220099713	220099713	C	T	exonic	ANKZF1	NA	nonsynonymous SNV	ANKZF1:NM_001042410:exon10:c.C1370T:p.T457I,ANKZF1:NM_018089:exon10:c.C1370T:p.T457I	exonic	ENSG00000163516	NA	nonsynonymous SNV	ENSG00000163516:ENST00000409849:exon7:c.C740T:p.T247I,ENSG00000163516:ENST00000323348:exon10:c.C1370T:p.T457I,ENSG00000163516:ENST00000410034:exon10:c.C1370T:p.T457I	NA	NA	2q35	NA	NA	NA	NA	rs140395841	0.0018	0.0018	0.002	0.00199681	0.004	NA	NA	NA	0.0061	0.004	NA	0.0028	NA	0.0066	0.011	0.21	T	0.048	B	0.01	B	0.106	N	1.000	N	1.87	L	1.9	T	-1.087	T	0.050	T	0.113	-0.372	2.247	5.2	2.705	1.800	15.585	-0.372488	NA	0.1	0.005978	0.002217	NA	0.007	NA	10.3167554
620	7	100486754	100486754	G	C	exonic	UFSP1	NA	nonsynonymous SNV	UFSP1:NM_001015072:exon1:c.C139G:p.L47V	exonic	ENSG00000176125	NA	nonsynonymous SNV	ENSG00000176125:ENST00000388761:exon1:c.C139G:p.L47V	NA	Name=Resting heart rate	7q22.1	NA	Name=Sin3Ak-20,Pol2-4H8	NA	NA	rs12666989	0.11	0.11	0.09	0.0884585	0.1829	0.0308	0.1023	0.0416	0.1043	0.2	0.03	0.12	0.04	0.156	0.2	0.62	T	0.77	P	0.353	B	0.268	N	1.000	P	0.535	N	1.56	T	-1.026	T	0.000	T	0.156	-1.34	0.03	2.54	0.567	0.527	7.534	-1.33953	NA	0.67	0.17814	0.056338	NA	0.109	NA	10.3162934
620	19	38056763	38056763	C	G	exonic	ZNF571	NA	nonsynonymous SNV	ZNF571:NM_016536:exon4:c.G567C:p.Q189H	exonic	ENSG00000180479	NA	nonsynonymous SNV	ENSG00000180479:ENST00000328550:exon4:c.G567C:p.Q189H,ENSG00000180479:ENST00000451802:exon4:c.G567C:p.Q189H,ENSG00000180479:ENST00000593133:exon4:c.G567C:p.Q189H,ENSG00000180479:ENST00000358744:exon5:c.G567C:p.Q189H	NA	NA	19q13.12	NA	Name=KAP1	NA	NA	rs8111790	0.2	0.2	0.184	0.179912	0.3618	0.0288	0.2651	0.0885	0.2117	0.37	0.04	0.26	0.09	0.2905	0.37	1	T	0.0	B	0.001	B	.	.	0.000	P	-2.725	N	4.75	T	-0.931	T	0.000	T	0.078	-0.696	0.983	-6.98	-1.791	-2.048	3.981	-0.696452	NA	1	0.364884	0.133227	ID=COSM1393235;OCCURENCE=1(large_intestine)	0.304	NA	10.3161494
620	8	38869207	38869207	G	A	exonic	ADAM9	NA	nonsynonymous SNV	ADAM9:NM_003816:exon3:c.G226A:p.E76K	exonic	ENSG00000168615	NA	nonsynonymous SNV	ENSG00000168615:ENST00000379917:exon3:c.G226A:p.E76K,ENSG00000168615:ENST00000466936:exon3:c.G226A:p.E76K,ENSG00000168615:ENST00000468065:exon3:c.G226A:p.E76K,ENSG00000168615:ENST00000481513:exon3:c.G226A:p.E76K,ENSG00000168615:ENST00000481873:exon3:c.G226A:p.E76K,ENSG00000168615:ENST00000487273:exon3:c.G226A:p.E76K	Score=498;Name=lod=141	NA	8p11.22	Score=833;Name=V$OCT1_02	NA	NA	NA	rs61753672	0.0027	0.0027	0	0.00399361	0.005	NA	0.0029	0.0008	0.0123	0.004	NA	0.01	0.002	0.0064	0.011	0.97	T	0.084	B	0.097	B	0.003	N	0.633	N	0.28	N	3.24	T	-0.951	T	0.008	T	0.218	0.349	5.892	1.19	0.469	1.084	6.302	0.348613	NA	0.3	0.00593	0.000454	NA	0.007	NA	10.3160034
620	3	197401952	197401952	T	C	exonic	KIAA0226	NA	synonymous SNV	KIAA0226:NM_014687:exon20:c.A2856G:p.S952S,KIAA0226:NM_001145642:exon21:c.A2721G:p.S907S	exonic	ENSG00000145016	NA	synonymous SNV	ENSG00000145016:ENST00000296343:exon20:c.A2856G:p.S952S,ENSG00000145016:ENST00000273582:exon21:c.A2721G:p.S907S	Score=343;Name=lod=33	NA	3q29	NA	NA	NA	NA	rs28562770	0.21	0.21	0.239	0.236022	0.1173	0.0327	0.0865	0.6475	0.1176	0.11	0.04	0.09	0.65	0.1315	0.65	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.928	T	0.000	T	.	0.3	5.623	-5.35	-0.833	-7.278	1.096	0.299568	NA	NA	0.101944	0.528594	NA	0.319	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117386.2;CLNDSDB=.;CLNDSDBID=.	10.3159226
620	16	723506	723506	C	T	exonic	RHOT2	NA	nonsynonymous SNV	RHOT2:NM_138769:exon19:c.C1757T:p.P586L	exonic	ENSG00000140983	NA	nonsynonymous SNV	ENSG00000140983:ENST00000315082:exon19:c.C1757T:p.P586L	NA	NA	16p13.3	NA	NA	Name=4	NA	rs147973504	0.0018	0.0018	0.001	0.00279553	0.006	NA	0.0029	NA	0.0061	0.004	NA	0.0028	NA	0.0053	0.011	0.12	T	0.021	B	0.017	B	0.007	N	0.733	N	0.345	N	2.58	T	-1.024	T	0.017	T	0.146	1.405	10.63	4.64	2.139	0.468	14.996	1.404865	1.404865	0.04	0.006401	0.000909	ID=COSM328360;OCCURENCE=1(pancreas)	0.007	NA	10.3156324
621	2	220354108	220354108	A	G	exonic	SPEG	NA	nonsynonymous SNV	SPEG:NM_005876:exon36:c.A8368G:p.R2790G	exonic	ENSG00000072195	NA	nonsynonymous SNV	ENSG00000072195:ENST00000312358:exon36:c.A8368G:p.R2790G	Score=437;Name=lod=80	NA	2q35	NA	NA	NA	NA	rs55760516	0.37	0.37	0.325	0.408347	0.334	0.2321	0.4092	0.5333	0.4969	0.33	0.25	0.43	0.52	0.3622	0.52	1	T	0.0	B	0.0	B	0.002	N	0.000	P	0	N	-0.03	T	-0.947	T	0.000	T	0.028	0.944	8.848	4.33	1.063	1.890	6.806	0.943804	NA	0.19	0.323814	0.480769	NA	0.261	NA	10.3133194
621	21	47614469	47614469	A	C	exonic	LSS	NA	nonsynonymous SNV	LSS:NM_001145437:exon19:c.T1684G:p.L562V,LSS:NM_001001438:exon20:c.T1924G:p.L642V,LSS:NM_001145436:exon20:c.T1891G:p.L631V,LSS:NM_002340:exon20:c.T1924G:p.L642V	exonic	ENSG00000160285	NA	nonsynonymous SNV	ENSG00000160285:ENST00000457828:exon19:c.T1684G:p.L562V,ENSG00000160285:ENST00000356396:exon20:c.T1924G:p.L642V,ENSG00000160285:ENST00000397728:exon20:c.T1924G:p.L642V,ENSG00000160285:ENST00000522411:exon20:c.T1891G:p.L631V	Score=391;Name=lod=52	NA	21q22.3	NA	Name=Rad21	Name=4	NA	rs2254524	0.74	0.74	0.773	0.732228	0.6809	0.6875	0.5821	0.9319	0.6677	0.68	0.72	0.6	0.94	0.675	0.94	1	T	0.0	B	0.0	B	0.044	N	1.000	P	-2.365	N	2.07	T	-0.995	T	0.000	T	0.188	-0.136	3.333	3.26	0.275	2.308	7.861	-0.136198	NA	1	0.666512	0.888561	ID=COSM444622;OCCURENCE=1(breast)	0.862	NA	10.3109214
621	19	14001206	14001206	G	A	exonic	C19orf57	NA	nonsynonymous SNV	C19orf57:NM_024323:exon6:c.C463T:p.L155F	exonic	ENSG00000132016	NA	nonsynonymous SNV	ENSG00000132016:ENST00000586783:exon5:c.C463T:p.L155F,ENSG00000132016:ENST00000346736:exon6:c.C463T:p.L155F,ENSG00000132016:ENST00000454313:exon6:c.C463T:p.L155F	NA	NA	19p13.12	NA	NA	NA	NA	rs144502446	0.0046	0.0046	0.01	0.00279553	0.0089	NA	0.0014	0.0023	0.001	0.01	NA	NA	0.0041	0.0072	0.011	0.25	T	0.0	B	0.001	B	.	.	1.000	N	0.145	N	1.67	T	-1.066	T	0.020	T	0.023	-0.896	0.447	-5.29	-3.561	-4.466	0.575	-0.895879	NA	0.27	0.006409	0.001136	NA	0.007	NA	10.3108244
621	13	103459861	103459861	A	G	exonic	BIVM,BIVM-ERCC5	NA	nonsynonymous SNV	BIVM-ERCC5:NM_001204425:exon1:c.A244G:p.I82V,BIVM:NM_017693:exon3:c.A244G:p.I82V	exonic	ENSG00000134897,ENSG00000270181	NA	nonsynonymous SNV	ENSG00000134897:ENST00000419638:exon2:c.A244G:p.I82V,ENSG00000134897:ENST00000257336:exon3:c.A244G:p.I82V	Score=609;Name=lod=399	NA	13q33.1	NA	NA	Name=5	NA	rs41281670	0.0023	0.0023	0.003	0.00159744	0.006	NA	0.0029	NA	NA	0.01	NA	NA	NA	0.0054	0.011	0.74	T	0.005	B	0.006	B	0.003	N	1.000	D	0	N	.	.	-1.059	T	0.029	T	0.1	0.929	8.784	-1.0	-0.318	0.150	1.398	0.928949	NA	0.95	0.011512	0.00227	NA	NA	NA	10.3104214
621	17	41244435	41244435	T	C	exonic	BRCA1	NA	nonsynonymous SNV	BRCA1:NM_007297:exon9:c.A2972G:p.E991G,BRCA1:NM_007294:exon10:c.A3113G:p.E1038G,BRCA1:NM_007300:exon10:c.A3113G:p.E1038G	exonic	ENSG00000012048	NA	nonsynonymous SNV	ENSG00000012048:ENST00000309486:exon9:c.A2225G:p.E742G,ENSG00000012048:ENST00000493795:exon9:c.A2972G:p.E991G,ENSG00000012048:ENST00000346315:exon10:c.A3113G:p.E1038G,ENSG00000012048:ENST00000354071:exon10:c.A3113G:p.E1038G,ENSG00000012048:ENST00000357654:exon10:c.A3113G:p.E1038G,ENSG00000012048:ENST00000471181:exon10:c.A3113G:p.E1038G	NA	NA	17q21.31	NA	NA	NA	NA	rs16941	0.3	0.3	0.271	0.335663	0.3569	0.371	0.3646	0.1573	0.498	0.36	0.33	0.38	0.13	0.3429	0.38	0.04	D	0.936	P	0.606	P	0.155	N	1.000	P	2.54	M	-1.24	T	-1.094	T	0.000	T	0.252	1.803	11.99	-0.974	0.112	-0.480	6.162	1.80339	1.80339	0.04	0.325465	0.188379	NA	0.254	CLINSIG=non-pathogenic|non-pathogenic|untested|untested|non-pathogenic;CLNDBN=not_provided|Breast-ovarian_cancer\x2c_familial_1|Familial_cancer_of_breast|not_specified|Neoplastic_Syndromes\x2c_Hereditary;CLNREVSTAT=mult|mult|not|not|single;CLNACC=RCV000034738.2|RCV000112006.2|RCV000114987.1|RCV000120276.1|RCV000128978.1;CLNDSDB=.|GeneReviews:MedGen:OMIM:Orphanet|GeneReviews:MedGen:OMIM:SNOMED_CT|.|MedGen;CLNDSDBID=.|NBK1247:C2676676:604370:ORPHA145|NBK1247:C0346153:114480:254843006|.|C0027672	10.3080684
621	19	57648277	57648277	A	T	exonic	ZIM3	NA	nonsynonymous SNV	ZIM3:NM_052882:exon4:c.T205A:p.L69M	exonic	ENSG00000141946	NA	nonsynonymous SNV	ENSG00000141946:ENST00000269834:exon4:c.T205A:p.L69M	NA	NA	19q13.43	NA	Name=PU.1	NA	NA	rs4801200	0.4	0.4	0.381	0.420927	0.5099	0.3621	0.4755	0.267	0.5593	0.49	0.36	0.51	0.24	0.4865	0.53	1	T	0.704	P	0.198	B	.	.	1.000	P	-0.91	N	3.57	T	-0.938	T	0.000	T	0.028	0.635	7.413	-4.65	-1.311	-1.600	3.276	0.635215	NA	0.11	0.529535	0.310259	NA	0.283	NA	10.3073984
621	3	58395863	58395863	A	G	exonic	PXK	NA	nonsynonymous SNV	PXK:NM_017771:exon16:c.A1442G:p.K481R	exonic	ENSG00000168297	NA	nonsynonymous SNV	ENSG00000168297:ENST00000493474:exon2:c.A50G:p.K17R,ENSG00000168297:ENST00000459676:exon7:c.A521G:p.K174R,ENSG00000168297:ENST00000536660:exon13:c.A1031G:p.K344R,ENSG00000168297:ENST00000383716:exon14:c.A1343G:p.K448R,ENSG00000168297:ENST00000463280:exon14:c.A1343G:p.K448R,ENSG00000168297:ENST00000302779:exon15:c.A1391G:p.K464R,ENSG00000168297:ENST00000383715:exon15:c.A1391G:p.K464R,ENSG00000168297:ENST00000479241:exon15:c.A1391G:p.K464R,ENSG00000168297:ENST00000356151:exon16:c.A1442G:p.K481R,ENSG00000168297:ENST00000484288:exon16:c.A1442G:p.K481R	Score=496;Name=lod=138	NA	3p14.3	NA	NA	NA	NA	rs56384862	0.2	0.2	0.184	0.177316	0.3777	0.001	0.2767	0.1112	0.1718	0.36	NA	0.3	0.13	0.2759	0.37	0.24	T	0.107	B	0.021	B	0.002	N	0.004	P	1.265	L	2.14	T	-0.978	T	0.000	T	0.241	2.69	14.95	5.9	2.268	4.760	14.945	2.689584	2.689584	0.03	0.372674	0.131639	ID=COSM446941;OCCURENCE=1(breast)	0.29	NA	10.3070594
621	13	103343230	103343230	C	G	exonic	METTL21C	NA	nonsynonymous SNV	METTL21C:NM_001010977:exon2:c.G215C:p.R72P	exonic	ENSG00000139780	NA	nonsynonymous SNV	ENSG00000139780:ENST00000267273:exon2:c.G215C:p.R72P	NA	NA	13q33.1	Score=845;Name=V$GATA1_02	NA	NA	NA	rs149948690	0.0032	0.0032	0.002	0.00359425	0.007	NA	0.0043	0.0008	0.0072	0.01	NA	0.0028	0.002	0.01	0.01	0.28	T	0.431	B	0.071	B	0.025	N	1.000	N	0.55	N	2.51	T	-1.035	T	0.013	T	0.11	1.59	11.27	-4.69	-0.770	-0.991	3.606	1.590051	1.590051	0.2	0.010116	0.001135	NA	NA	NA	10.3062174
621	5	52240850	52240850	C	A	exonic	ITGA1	NA	nonsynonymous SNV	ITGA1:NM_181501:exon27:c.C3363A:p.S1121R	exonic	ENSG00000213949	NA	nonsynonymous SNV	ENSG00000213949:ENST00000282588:exon27:c.C3363A:p.S1121R	Score=450;Name=lod=90	NA	5q11.2	Score=791;Name=V$MEF2_02	NA	Name=20	NA	rs151102756	0.01	0.01	0.005	0.00539137	0.0129	0.001	0.0014	NA	0.0123	0.01	0.0017	0.0028	NA	0.0072	0.01	0.41	T	0.136	B	0.017	B	0.042	N	0.860	N	0.64	N	0.79	T	-1.103	T	0.039	T	0.202	2.011	12.68	0.424	0.381	-0.592	0.543	2.010677	2.010677	0.12	0.007907	0.001362	NA	NA	NA	10.3053264
622	22	21133831	21133831	C	A	exonic	SERPIND1	NA	nonsynonymous SNV	SERPIND1:NM_000185:exon2:c.C231A:p.D77E	exonic	ENSG00000099937	NA	nonsynonymous SNV	ENSG00000099937:ENST00000406799:exon1:c.C231A:p.D77E,ENSG00000099937:ENST00000215727:exon2:c.C231A:p.D77E	NA	NA	22q11.21	NA	NA	NA	NA	rs5903	NA	NA	NA	0.00339457	0.0119	NA	0.0043	NA	0.002	NA	NA	NA	NA	0.0069	0.0097	1	T	0.0	B	0.0	B	0.001	N	1.000	N	-0.295	N	-1.53	D	-0.812	T	0.089	T	0.122	0.164	4.885	-11.5	-1.815	-2.171	7.576	0.164489	NA	1	0.009651	0.00227	NA	NA	NA	10.3048824
622	4	1165130	1165130	G	T	exonic	SPON2	NA	nonsynonymous SNV	SPON2:NM_012445:exon3:c.C365A:p.A122E,SPON2:NM_001128325:exon4:c.C365A:p.A122E,SPON2:NM_001199021:exon5:c.C365A:p.A122E	exonic	ENSG00000159674	NA	nonsynonymous SNV	ENSG00000159674:ENST00000290902:exon3:c.C365A:p.A122E,ENSG00000159674:ENST00000431380:exon4:c.C365A:p.A122E	NA	NA	4p16.3	Score=850;Name=V$AHRARNT_01	Name=CTCF	Name=25	NA	rs11247975	0.58	0.58	0.601	0.554513	0.6839	0.6756	0.7089	0.2284	0.6278	0.68	0.7	0.67	0.23	0.6624	0.7	0.91	T	0.009	B	0.019	B	0.036	N	0.998	P	.	.	1.04	T	-1.020	T	0.000	T	0.027	0.628	7.379	-8.23	-2.550	0.841	10.976	0.628442	NA	0.39	0.68635	0.313008	NA	0.174	NA	10.3006834
622	17	36959002	36959002	G	A	exonic	CWC25	NA	nonsynonymous SNV	CWC25:NM_017748:exon9:c.C1114T:p.R372W	exonic	ENSG00000108296	NA	nonsynonymous SNV	ENSG00000108296:ENST00000225428:exon9:c.C1114T:p.R372W,ENSG00000108296:ENST00000536127:exon10:c.C925T:p.R309W	Score=472;Name=lod=111	NA	17q12	NA	NA	NA	NA	rs139189793	0.0032	0.0032	0.003	0.00319489	0.008	NA	0.0029	0.0008	0.0051	0.01	NA	0.0028	0.002	0.0095	0.015	0.06	T	0.004	B	0.002	B	0.002	N	0.994	D	1.795	L	.	.	-0.920	T	0.100	T	0.102	2.871	15.57	1.4	0.367	3.333	8.846	2.871419	2.871419	0.08	0.015318	0.003	NA	0.007	NA	10.3005154
622	16	84270476	84270476	G	A	exonic	KCNG4	NA	nonsynonymous SNV	KCNG4:NM_172347:exon2:c.C616T:p.R206W	exonic	ENSG00000168418	NA	nonsynonymous SNV	ENSG00000168418:ENST00000308251:exon2:c.C616T:p.R206W,ENSG00000168418:ENST00000568181:exon2:c.C616T:p.R206W	NA	NA	16q24.1	Score=971;Name=V$AP4_Q6	NA	NA	NA	rs11646443	0.24	0.24	0.214	0.273762	0.3628	0.1161	0.2507	0.2262	0.4254	0.36	0.11	0.25	0.19	0.3357	0.36	0.17	T	0.055	B	0.011	B	0.808	U	1.000	P	0.805	L	-4.21	D	-1.095	T	0.000	T	0.092	1.675	11.56	3.0	0.386	1.442	5.841	1.675051	1.675051	0.15	0.334691	0.245905	NA	0.37	NA	10.3001424
622	11	55541019	55541019	G	A	exonic	OR5D13	NA	nonsynonymous SNV	OR5D13:NM_001001967:exon1:c.G106A:p.V36I	exonic	ENSG00000198877	NA	nonsynonymous SNV	ENSG00000198877:ENST00000361760:exon1:c.G106A:p.V36I	NA	NA	11q11	NA	NA	NA	NA	rs147031394	0.01	0.01	0.008	0.0071885	0.0139	0.001	0.0101	0.0038	0.0092	0.01	NA	0.01	0.01	0.0094	0.012	1	T	0.002	B	0.001	B	0.860	N	1.000	N	-0.37	N	7.44	T	-0.999	T	0.000	T	0.023	-1.392	0.024	-4.35	-0.957	-1.802	4.036	-1.392498	NA	1	0.012221	0.003864	NA	0.007	NA	10.2978124
622	6	27420048	27420048	G	C	exonic	ZNF184	NA	nonsynonymous SNV	ZNF184:NM_007149:exon6:c.C1290G:p.H430Q	exonic	ENSG00000096654	NA	nonsynonymous SNV	ENSG00000096654:ENST00000211936:exon6:c.C1290G:p.H430Q,ENSG00000096654:ENST00000377419:exon6:c.C1290G:p.H430Q	NA	NA	6p22.1	NA	Name=KAP1,SETDB1	NA	NA	rs61736956	0.01	0.01	0.005	0.00519169	0.0129	NA	0.013	NA	0.0041	0.01	NA	0.02	NA	0.0097	0.02	0.47	T	0.043	B	0.02	B	0.000	D	0.999	N	0.19	N	2.49	T	-0.914	T	0.006	T	0.235	1.071	9.372	2.49	0.810	-0.682	9.238	1.070845	NA	0.42	0.013488	0.004085	NA	0.058	NA	10.2972454
622	11	28119309	28119309	T	G	exonic	KIF18A	NA	nonsynonymous SNV	KIF18A:NM_031217:exon2:c.A186C:p.Q62H	exonic	ENSG00000121621	NA	nonsynonymous SNV	ENSG00000121621:ENST00000263181:exon2:c.A186C:p.Q62H	Score=587;Name=lod=324	NA	11p14.1	NA	NA	NA	NA	rs144868444	0.01	0.01	0.004	0.00359425	0.0159	NA	NA	NA	0.002	0.02	NA	NA	NA	0.0088	0.02	0.57	T	0.001	B	0.012	B	0.001	D	0.906	N	0.51	N	-0.91	T	-1.045	T	0.088	T	0.034	1.141	9.649	3.16	0.442	0.411	1.892	1.140934	NA	0.16	0.012448	0.002044	NA	0.007	NA	10.2961854
622	15	85447434	85447434	G	T	exonic	SLC28A1	NA	nonsynonymous SNV	SLC28A1:NM_004213:exon7:c.G568T:p.A190S	exonic	ENSG00000156222	NA	nonsynonymous SNV	ENSG00000156222:ENST00000286749:exon6:c.G568T:p.A190S,ENSG00000156222:ENST00000538177:exon6:c.G568T:p.A190S,ENSG00000156222:ENST00000394573:exon7:c.G568T:p.A190S,ENSG00000156222:ENST00000537216:exon7:c.G568T:p.A190S,ENSG00000156222:ENST00000537624:exon7:c.G568T:p.A190S,ENSG00000156222:ENST00000537703:exon7:c.G334T:p.A112S	NA	NA	15q25.3	NA	NA	NA	NA	rs45523532	0.01	0.01	0.007	0.0081869	0.0139	0.001	0.013	0.0129	NA	0.01	0.0017	0.01	0.02	0.0092	0.022	0.11	T	0.012	B	0.032	B	0.147	N	1.000	N	0.4	N	2.4	T	-1.031	T	0.010	T	0.097	-0.489	1.754	-8.76	-2.978	-4.106	1.207	-0.488578	NA	0.04	0.014422	0.013845	NA	0.014	NA	10.2958114
623	11	120973430	120973430	A	G	exonic	TECTA	NA	nonsynonymous SNV	TECTA:NM_005422:exon1:c.A56G:p.Q19R	exonic	ENSG00000109927	NA	nonsynonymous SNV	ENSG00000109927:ENST00000264037:exon1:c.A56G:p.Q19R,ENSG00000109927:ENST00000392793:exon2:c.A56G:p.Q19R	Score=637;Name=lod=518	NA	11q23.3	Score=773;Name=V$NRSF_01	NA	NA	NA	rs35507522	0.03	0.03	0.03	0.0413339	0.0099	NA	0.0101	0.1256	0.0245	0.01	NA	0.0028	0.12	0.0201	0.12	1	T	0.0	B	0.0	B	0.967	N	1.000	N	-1.095	N	1.3	T	-1.039	T	0.001	T	0.044	-0.714	0.926	-1.09	-0.408	0.028	12.607	-0.714189	NA	1	0.009537	0.10236	NA	0.036	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000038504.1;CLNDSDB=.;CLNDSDBID=.	10.2937964
623	9	112219474	112219474	C	G	exonic	PTPN3	NA	nonsynonymous SNV	PTPN3:NM_001145368:exon4:c.G268C:p.A90P,PTPN3:NM_002829:exon4:c.G268C:p.A90P	exonic	ENSG00000070159	NA	nonsynonymous SNV	ENSG00000070159:ENST00000262539:exon4:c.G20C:p.S7T,ENSG00000070159:ENST00000374541:exon4:c.G268C:p.A90P	Score=529;Name=lod=188	NA	9q31.3	NA	NA	NA	NA	rs3793524	0.38	0.38	0.399	0.408347	0.3439	0.3442	0.2939	0.5318	0.455	0.35	0.35	0.33	0.5	0.3568	0.5	1	T	0.0	B	0.0	B	0.000	N	0.000	P	-2.26	N	-1.04	T	-0.988	T	0.000	T	0.1	4.526	24.4	5.56	1.370	6.534	16.312	4.525557	4.525557	1	0.338953	0.48207	NA	0.42	NA	10.2936804
623	18	29793346	29793346	C	T	exonic	MEP1B	NA	nonsynonymous SNV	MEP1B:NM_005925:exon11:c.C1403T:p.A468V	exonic	ENSG00000141434	NA	nonsynonymous SNV	ENSG00000141434:ENST00000269202:exon11:c.C1403T:p.A468V,ENSG00000141434:ENST00000581447:exon11:c.C1403T:p.A468V	NA	NA	18q12.1	NA	NA	NA	NA	rs141050716	0.01	0.01	0.005	0.00878594	0.0159	NA	0.0274	0.0015	0.0072	0.01	NA	0.03	0.0041	0.0104	0.03	0.05	D	0.039	B	0.049	B	0.418	N	1.000	N	-0.55	N	0.97	T	-0.955	T	0.013	T	0.049	0.29	5.569	-11.4	-2.917	-1.797	11.117	0.289753	NA	0.28	0.015819	0.003185	NA	0.007	NA	10.2912144
623	19	14153293	14153293	T	C	exonic	IL27RA	NA	nonsynonymous SNV	IL27RA:NM_004843:exon5:c.T563C:p.L188P	exonic	ENSG00000104998	NA	nonsynonymous SNV	ENSG00000104998:ENST00000263379:exon5:c.T563C:p.L188P	NA	NA	19p13.12	NA	NA	NA	NA	rs35026308	0.16	0.16	0.132	0.141773	0.1968	0.2659	0.1311	0.0212	0.1278	0.19	0.26	0.14	0.02	0.1625	0.26	0.27	T	0.978	D	0.694	P	0.537	N	1.000	P	0.975	L	0.52	T	-1.073	T	0.000	T	0.142	1.708	11.67	2.52	0.330	1.225	7.559	1.708448	1.708448	0.06	0.186744	0.043577	NA	0.123	NA	10.2872894
623	2	228194480	228194480	A	T	exonic	MFF	NA	nonsynonymous SNV	MFF:NM_001277061:exon3:c.A19T:p.S7C,MFF:NM_020194:exon3:c.A19T:p.S7C	exonic	ENSG00000168958	NA	nonsynonymous SNV	ENSG00000168958:ENST00000353339:exon3:c.A19T:p.S7C,ENSG00000168958:ENST00000392059:exon3:c.A19T:p.S7C,ENSG00000168958:ENST00000436237:exon3:c.A19T:p.S7C,ENSG00000168958:ENST00000443428:exon3:c.A19T:p.S7C	Score=534;Name=lod=198	NA	2q36.3	NA	NA	NA	NA	rs3211097	0.2	0.2	0.201	0.269369	0.3678	0.2431	0.245	0.0961	0.4468	0.27	0.19	0.24	0.07	0.3291	0.35	.	.	0.0	B	0.001	B	0.013	N	0.000	P	0.69	N	1.33	T	-0.989	T	0.000	T	0.257	2.649	14.82	4.8	1.049	3.440	10.393	2.649436	2.649436	0	0.349186	0.118248	NA	NA	NA	10.2872474
624	1	26357656	26357656	C	A	exonic	EXTL1	NA	nonsynonymous SNV	EXTL1:NM_004455:exon5:c.C1135A:p.H379N	exonic	ENSG00000158008	NA	nonsynonymous SNV	ENSG00000158008:ENST00000374280:exon5:c.C1135A:p.H379N	NA	NA	1p36.11	Score=870;Name=V$SREBP1_02	NA	NA	NA	rs2736831	0.61	0.61	0.567	0.594249	0.6978	0.75	0.732	0.2027	0.7587	0.72	0.73	0.72	0.23	0.6742	0.73	0.27	T	0.029	B	0.01	B	0.019	N	0.557	P	1.5	L	-3.54	D	-0.903	T	0.000	T	0.057	4.233	22	4.7	2.453	1.294	16.601	4.233153	4.233153	NA	0.678256	0.289605	NA	0.377	NA	10.2830774
624	7	139715645	139715645	C	A	exonic	TBXAS1	NA	nonsynonymous SNV	TBXAS1:NM_001061:exon11:c.C1352A:p.T451N,TBXAS1:NM_030984:exon11:c.C1352A:p.T451N,TBXAS1:NM_001166253:exon12:c.C1490A:p.T497N,TBXAS1:NM_001166254:exon13:c.C1148A:p.T383N,TBXAS1:NM_001130966:exon15:c.C1352A:p.T451N	exonic	ENSG00000059377	NA	nonsynonymous SNV	ENSG00000059377:ENST00000411653:exon11:c.C1349A:p.T450N,ENSG00000059377:ENST00000414508:exon11:c.C1352A:p.T451N,ENSG00000059377:ENST00000436047:exon11:c.C1352A:p.T451N,ENSG00000059377:ENST00000448866:exon11:c.C1349A:p.T450N,ENSG00000059377:ENST00000416849:exon12:c.C1490A:p.T497N,ENSG00000059377:ENST00000458722:exon12:c.C1487A:p.T496N,ENSG00000059377:ENST00000425687:exon13:c.C1148A:p.T383N,ENSG00000059377:ENST00000263552:exon15:c.C1352A:p.T451N,ENSG00000059377:ENST00000336425:exon15:c.C1349A:p.T450N	Score=295;Name=lod=21	NA	7q34	Score=875;Name=V$HNF4_01	NA	NA	NA	rs5763	0.01	0.01	0.006	0.00539137	0.0149	NA	0.0072	0.0015	0.0051	0.01	NA	0.01	0.002	0.0148	0.021	0.07	T	0.011	B	0.07	B	0.019	N	1.000	D	1.495	L	-0.4	T	-0.987	T	0.100	T	0.094	-0.133	3.35	0.297	0.039	-0.032	4.204	-0.132775	NA	0.06	0.020698	0.003404	NA	0.007	NA	10.2829354
624	1	18807953	18807953	C	A	exonic	KLHDC7A	NA	nonsynonymous SNV	KLHDC7A:NM_152375:exon1:c.C478A:p.R160S	exonic	ENSG00000179023	NA	nonsynonymous SNV	ENSG00000179023:ENST00000400664:exon1:c.C478A:p.R160S	NA	NA	1p36.13	NA	Name=TCF12,ERalpha_a,PAX5-N19	Name=11	NA	rs11261022	0.31	0.31	0.299	0.279553	0.3628	0.2321	0.3401	0.2534	0.2352	0.38	0.24	0.29	0.28	0.3362	0.38	0.62	T	0.026	B	0.008	B	0.550	U	1.000	P	0	N	-0.62	T	-1.049	T	0.000	T	0.033	1.765	11.86	-3.99	-0.507	-4.138	2.446	1.764864	1.764864	0.26	0.351466	0.2494	NA	0.225	NA	10.2828674
624	2	207162033	207162033	A	G	exonic	ZDBF2	NA	nonsynonymous SNV	ZDBF2:NM_020923:exon4:c.A124G:p.S42G	exonic	ENSG00000204186	NA	nonsynonymous SNV	ENSG00000204186:ENST00000374423:exon4:c.A124G:p.S42G	NA	NA	2q33.3	NA	NA	NA	NA	rs116382753	0.01	0.01	0.006	0.00559105	0.0169	NA	0.0115	0.0008	0.002	0.02	NA	0.02	NA	0.0144	0.022	0.01	D	0.137	B	0.049	B	.	.	1.000	N	1.5	L	2.06	T	-1.044	T	0.024	T	0.091	3.498	17.88	3.66	0.804	5.597	8.266	3.498075	3.498075	0.01	0.019506	0.005529	NA	0.014	NA	10.2825274
624	5	174106	174106	G	A	exonic	PLEKHG4B	NA	nonsynonymous SNV	PLEKHG4B:NM_052909:exon16:c.G3227A:p.R1076Q	exonic	ENSG00000153404	NA	nonsynonymous SNV	ENSG00000153404:ENST00000283426:exon16:c.G3227A:p.R1076Q	Score=579;Name=lod=301	NA	5p15.33	NA	NA	Name=3	NA	rs4956987	0.33	0.33	0.303	0.338858	0.504	0.2659	0.3804	0.0877	0.5542	0.5	0.26	0.39	0.09	0.4992	0.55	0.08	T	0.994	D	0.862	P	.	.	0.981	P	0.95	L	2.79	T	-0.916	T	0.000	T	0.05	2.606	14.67	0.527	-0.290	3.436	7.067	2.605848	2.605848	0.02	0.54907	0.167953	NA	0.391	NA	10.2810634
624	4	79455714	79455714	C	G	exonic	FRAS1	NA	synonymous SNV	FRAS1:NM_025074:exon71:c.C11037G:p.P3679P	exonic	ENSG00000138759	NA	synonymous SNV	ENSG00000138759:ENST00000264895:exon71:c.C11037G:p.P3679P	Score=491;Name=lod=132	NA	4q21.21	Score=942;Name=V$CDPCR3HD_01	Name=ERalpha_a	NA	NA	rs4975070	0.52	0.52	0.52	0.514976	0.4632	0.7758	0.4395	0.3086	0.6319	0.47	0.79	0.45	0.35	0.4884	0.79	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.987	T	0.000	T	.	0.402	6.186	3.2	2.336	0.493	9.098	0.402486	NA	NA	0.435938	0.337645	NA	0.486	NA	10.2791286
624	15	42134416	42134416	C	T	exonic	JMJD7-PLA2G4B,PLA2G4B	NA	nonsynonymous SNV	PLA2G4B:NM_001114633:exon9:c.C647T:p.A216V,JMJD7-PLA2G4B:NM_001198588:exon14:c.C1340T:p.A447V,JMJD7-PLA2G4B:NM_005090:exon14:c.C1340T:p.A447V	exonic	ENSG00000168970,ENSG00000243708	NA	nonsynonymous SNV	ENSG00000168970:ENST00000458483:exon9:c.C647T:p.A216V,ENSG00000243708:ENST00000452633:exon10:c.C647T:p.A216V,ENSG00000168970:ENST00000342159:exon14:c.C1340T:p.A447V,ENSG00000168970:ENST00000382448:exon14:c.C1340T:p.A447V	Score=340;Name=lod=32	NA	15q15.1	NA	NA	NA	NA	rs117260632	0.01	0.01	0.007	0.00579073	0.0189	NA	0.0115	0.0015	NA	0.02	NA	0.02	NA	0.015	0.021	1	T	0.001	B	0.001	B	0.000	N	1.000	N	-2.25	N	5.25	T	-0.938	T	0.001	T	0.148	0.159	4.854	4.7	0.755	2.220	7.470	0.158741	NA	1	0.020581	0.002951	NA	NA	NA	10.2788524
624	21	22746187	22746187	T	C	exonic	NCAM2	NA	nonsynonymous SNV	NCAM2:NM_004540:exon9:c.T1049C:p.L350P	exonic	ENSG00000154654	NA	nonsynonymous SNV	ENSG00000154654:ENST00000284894:exon6:c.T623C:p.L208P,ENSG00000154654:ENST00000400546:exon9:c.T1049C:p.L350P,ENSG00000154654:ENST00000535285:exon10:c.T1124C:p.L375P	Score=428;Name=lod=73	NA	21q21.1	NA	NA	Name=20	NA	rs232518	0.4	0.4	0.395	0.389776	0.3539	0.5804	0.2939	0.3782	0.3139	0.36	0.53	0.31	0.36	0.35	0.53	0.27	T	0.0	B	0.001	B	0.000	N	0.024	P	-0.195	N	1.5	T	-0.917	T	0.000	T	0.045	1.492	10.94	4.54	0.679	1.490	6.180	1.491592	1.491592	0.24	0.350924	0.369336	NA	0.312	NA	10.2785094
624	3	186390627	186390627	C	T	exonic	HRG	NA	nonsynonymous SNV	HRG:NM_000412:exon5:c.C610T:p.P204S	exonic	ENSG00000113905	NA	nonsynonymous SNV	ENSG00000113905:ENST00000232003:exon5:c.C610T:p.P204S	Score=376;Name=lod=45	Name=Activated partial thromboplastin time	3q27.3	NA	NA	NA	NA	rs9898	0.46	0.46	0.487	0.491414	0.327	0.5724	0.3977	0.6278	0.4591	0.32	0.54	0.42	0.63	0.3854	0.63	1	T	0.0	B	0.0	B	0.001	N	1.000	P	-1.935	N	2.64	T	-0.951	T	0.000	T	0.133	-1.67	0.012	4.35	0.779	2.157	7.213	-1.670189	NA	1	0.342442	0.593509	ID=COSM1179693;OCCURENCE=1(prostate)	0.391	NA	10.2784914
624	11	85437226	85437226	T	C	exonic	SYTL2	NA	nonsynonymous SNV	SYTL2:NM_206927:exon1:c.A274G:p.I92V,SYTL2:NM_206928:exon1:c.A274G:p.I92V	exonic	ENSG00000137501	NA	nonsynonymous SNV	ENSG00000137501:ENST00000354566:exon1:c.A274G:p.I92V,ENSG00000137501:ENST00000359152:exon1:c.A1846G:p.I616V,ENSG00000137501:ENST00000389959:exon1:c.A274G:p.I92V,ENSG00000137501:ENST00000525423:exon1:c.A274G:p.I92V	NA	NA	11q14.1	NA	Name=eGFP-JunD,TCF4,c-Jun,GATA-2,c-Fos,STAT3,JunD,eGFP-JunB,p300_(N-15),eGFP-FOS,SETDB1	Name=119	NA	rs75207631	0.01	0.01	0.008	0.00599042	0.0189	NA	0.0086	NA	0.0051	0.02	NA	0.01	0.002	0.0134	0.024	.	.	0.008	B	0.002	B	0.963	N	1.000	N	0.695	N	1.61	T	-1.008	T	0.024	T	0.058	-0.26	2.751	2.32	0.475	-0.036	6.724	-0.26008	NA	0.44	0.024424	0.003631	NA	0.007	NA	10.2766094
624	19	12089805	12089805	C	G	exonic	ZNF763	NA	nonsynonymous SNV	ZNF763:NM_001012753:exon4:c.C1075G:p.R359G	exonic	ENSG00000197054,ENSG00000267179	NA	nonsynonymous SNV	ENSG00000197054:ENST00000545530:exon2:c.C700G:p.R234G,ENSG00000197054:ENST00000343949:exon4:c.C1075G:p.R359G,ENSG00000197054:ENST00000358987:exon4:c.C1066G:p.R356G,ENSG00000197054:ENST00000538752:exon4:c.C1126G:p.R376G,ENSG00000267179:ENST00000590798:exon4:c.C1126G:p.R376G	NA	NA	19p13.2	NA	NA	NA	NA	rs7250894	0.02	0.02	0.019	0.019369	0.0229	0.006	0.0144	0.0257	0.0245	0.02	0.01	0.02	0.03	0.0167	0.03	0.07	T	0.997	D	0.973	D	.	.	1.000	N	1.305	L	1.96	T	-1.072	T	0.024	T	0.044	1.257	10.1	-2.81	-0.819	0.127	1.016	1.256644	1.256644	0	0.018432	0.027239	NA	0.014	NA	10.2753014
625	11	111781047	111781047	A	C	intronic	CRYAB	NA	NA	NA	exonic	ENSG00000109846	NA	nonsynonymous SNV	ENSG00000109846:ENST00000533971:exon2:c.T328G:p.C110G	NA	NA	11q23.1	NA	NA	NA	NA	rs11603779	0.27	0.27	0.257	0.239816	0.3231	0.1905	0.3069	0.1952	0.2178	0.32	0.18	0.35	0.23	0.2695	0.35	0.04	D	0.0	B	0.001	B	.	.	1.000	P	.	.	-2.68	D	-1.030	T	0.000	T	0.083	-0.046	3.779	-6.74	-1.113	.	2.709	-0.045988	NA	NA	0.299977	0.218537	NA	0.304	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000037213.1|RCV000124611.1;CLNDSDB=.|.;CLNDSDBID=.|.	10.2740897
625	10	121679013	121679013	A	G	exonic	SEC23IP	NA	nonsynonymous SNV	SEC23IP:NM_007190:exon11:c.A1930G:p.K644E	exonic	ENSG00000107651	NA	nonsynonymous SNV	ENSG00000107651:ENST00000543134:exon10:c.A1297G:p.K433E,ENSG00000107651:ENST00000369075:exon11:c.A1930G:p.K644E	Score=507;Name=lod=153	NA	10q26.11	NA	NA	Name=25	NA	rs2475298	0.74	0.74	0.747	0.751398	0.671	0.8363	0.7248	0.7821	0.7239	0.68	0.84	0.69	0.75	0.7164	0.84	1	T	0.0	B	0.001	B	0.000	N	1.000	P	-1.59	N	1.0	T	-0.966	T	0.000	T	0.079	-0.503	1.697	5.15	1.326	3.883	10.432	-0.502512	NA	1	0.672442	0.778938	NA	0.739	NA	10.2734914
625	22	45255630	45255630	T	C	exonic	ARHGAP8,PRR5-ARHGAP8	NA	synonymous SNV	ARHGAP8:NM_181335:exon11:c.T897C:p.R299R,ARHGAP8:NM_001017526:exon12:c.T990C:p.R330R,PRR5-ARHGAP8:NM_181334:exon14:c.T1263C:p.R421R	exonic	ENSG00000241484,ENSG00000248405	NA	synonymous SNV	ENSG00000241484:ENST00000356099:exon11:c.T897C:p.R299R,ENSG00000241484:ENST00000389774:exon12:c.T990C:p.R330R,ENSG00000248405:ENST00000361473:exon14:c.T1290C:p.R430R,ENSG00000241484:ENST00000389773:exon14:c.T1263C:p.R421R,ENSG00000248405:ENST00000352766:exon16:c.T1527C:p.R509R,ENSG00000241484:ENST00000517296:exon16:c.T1527C:p.R509R	Score=466;Name=lod=104	NA	22q13.31	NA	NA	NA	NA	rs61756769	0.11	0.11	0.113	0.123602	0.1431	0.0526	0.0533	0.2269	0.0869	0.14	0.05	0.06	0.17	0.1221	0.22	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.989	T	0.000	T	.	-0.546	1.526	-8.28	-1.175	-1.137	0.973	-0.545531	NA	NA	0.12814	0.223332	NA	0.13	NA	10.2733266
625	7	156469133	156469133	C	G	exonic	RNF32	NA	nonsynonymous SNV	RNF32:NM_001184996:exon9:c.C873G:p.H291Q,RNF32:NM_001184997:exon9:c.C873G:p.H291Q,RNF32:NM_030936:exon9:c.C873G:p.H291Q	exonic	ENSG00000105982	NA	nonsynonymous SNV	ENSG00000105982:ENST00000343665:exon7:c.C801G:p.H267Q,ENSG00000105982:ENST00000317955:exon9:c.C873G:p.H291Q,ENSG00000105982:ENST00000392743:exon9:c.C873G:p.H291Q,ENSG00000105982:ENST00000432459:exon9:c.C873G:p.H291Q,ENSG00000105982:ENST00000405335:exon10:c.C873G:p.H291Q	NA	NA	7q36.3	NA	Name=Pol2	NA	NA	rs2302147	0.42	0.42	0.43	0.401158	0.3479	0.4097	0.4121	0.5303	0.2648	0.37	0.41	0.37	0.53	0.3681	0.53	0.31	T	0.033	B	0.006	B	0.329	N	0.000	P	-0.6	N	1.02	T	-0.961	T	0.000	T	0.041	0.866	8.51	-3.84	-0.967	-1.452	12.477	0.866371	NA	0.36	0.345349	0.488652	NA	0.022	NA	10.2719844
625	7	116528240	116528240	C	T	exonic	CAPZA2	NA	synonymous SNV	CAPZA2:NM_006136:exon2:c.C99T:p.F33F	exonic	ENSG00000198898	NA	nonsynonymous SNV	ENSG00000198898:ENST00000464223:exon2:c.C32T:p.S11L,ENSG00000198898:ENST00000484325:exon3:c.C32T:p.S11L	Score=599;Name=lod=361	NA	7q31.2	NA	NA	NA	NA	rs4808	0.31	0.31	0.309	0.323482	0.2346	0.3948	0.3098	0.3888	0.2628	0.24	0.37	0.29	0.38	0.2645	0.38	0	D	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.004	T	0.000	T	.	1.763	11.85	3.5	0.143	1.798	9.172	1.762539	1.762539	0.04	0.229525	0.372674	NA	0.362	NA	10.271375
625	4	2990499	2990499	G	T	exonic	GRK4	NA	nonsynonymous SNV	GRK4:NM_001004056:exon2:c.G98T:p.R33L,GRK4:NM_001004057:exon3:c.G194T:p.R65L,GRK4:NM_182982:exon3:c.G194T:p.R65L	exonic	ENSG00000125388	NA	nonsynonymous SNV	ENSG00000125388:ENST00000345167:exon2:c.G98T:p.R33L,ENSG00000125388:ENST00000398051:exon2:c.G98T:p.R33L,ENSG00000125388:ENST00000398052:exon3:c.G194T:p.R65L,ENSG00000125388:ENST00000504933:exon3:c.G194T:p.R65L	Score=479;Name=lod=118	NA	4p16.3	NA	NA	Name=3	NA	rs2960306	0.34	0.34	0.338	0.3125	0.3777	0.0942	0.3285	0.5371	0.1554	0.38	0.1	0.34	0.54	0.3256	0.54	0.53	T	0.0	B	0.001	B	0.000	N	0.000	P	-2.085	N	4.57	T	-1.046	T	0.000	T	0.052	1.493	10.94	5.56	0.934	3.228	11.195	1.492816	1.492816	0.55	0.358837	0.491829	NA	0.254	NA	10.2711964
625	21	43547873	43547873	G	A	exonic	UMODL1	NA	nonsynonymous SNV	UMODL1:NM_001199527:exon19:c.G3790A:p.D1264N,UMODL1:NM_173568:exon19:c.G4006A:p.D1336N,UMODL1:NM_001004416:exon20:c.G3622A:p.D1208N,UMODL1:NM_001199528:exon20:c.G3406A:p.D1136N	exonic	ENSG00000177398	NA	nonsynonymous SNV	ENSG00000177398:ENST00000400427:exon19:c.G3790A:p.D1264N,ENSG00000177398:ENST00000408989:exon19:c.G4006A:p.D1336N,ENSG00000177398:ENST00000400424:exon20:c.G3406A:p.D1136N,ENSG00000177398:ENST00000408910:exon20:c.G3622A:p.D1208N	Score=425;Name=lod=71	NA	21q22.3	Score=853;Name=V$ZID_01	NA	NA	NA	rs220159	0.37	0.37	0.352	0.357827	0.3499	0.369	0.4236	0.3253	0.3517	0.35	0.38	0.43	0.33	0.3655	0.43	.	.	0.001	B	0.003	B	0.000	N	1.000	P	-1.845	N	-1.54	D	-0.977	T	0.000	T	0.015	-1.856	0.009	2.42	0.263	0.913	6.734	-1.855586	NA	1	0.351723	0.307274	ID=COSM1414247,COSM1414248;OCCURENCE=1(large_intestine)	0.326	NA	10.2662104
625	11	68855363	68855363	G	A	exonic	TPCN2	NA	nonsynonymous SNV	TPCN2:NM_139075:exon25:c.G2201A:p.G734E	exonic	ENSG00000162341	NA	nonsynonymous SNV	ENSG00000162341:ENST00000542467:exon18:c.G1655A:p.G552E,ENSG00000162341:ENST00000294309:exon25:c.G2201A:p.G734E	NA	NA	11q13.3	NA	NA	NA	NA	rs3829241	0.24	0.24	0.199	0.176318	0.3817	0.2063	0.2205	0.0386	0.089	0.36	0.21	0.27	0.05	0.3025	0.38	1	T	0.001	B	0.001	B	0.229	N	1.000	P	0	N	-4.07	D	-0.966	T	0.000	T	0.102	-2.162	0.005	-3.6	-0.426	1.094	3.602	-2.162036	NA	0.79	0.383326	0.105909	NA	0.181	CLINSIG=pathogenic;CLNDBN=Skin/hair/eye_pigmentation\x2c_variation_in\x2c_10;CLNREVSTAT=single;CLNACC=RCV000000764.1;CLNDSDB=MedGen:OMIM;CLNDSDBID=C2677088:612267	10.2658074
625	1	6693097	6693097	A	G	exonic	THAP3	NA	nonsynonymous SNV	THAP3:NM_001195752:exon5:c.A677G:p.Q226R,THAP3:NM_001195753:exon6:c.A680G:p.Q227R	exonic	ENSG00000041988	NA	nonsynonymous SNV	ENSG00000041988:ENST00000307896:exon5:c.A677G:p.Q226R,ENSG00000041988:ENST00000054650:exon6:c.A680G:p.Q227R	NA	NA	1p36.31	NA	NA	NA	NA	rs3174820	0.33	0.33	0.291	0.370407	0.332	0.3889	0.3429	0.3086	0.4939	0.33	0.38	0.32	0.28	0.3911	0.4	0.83	T	0.0	B	0.0	B	0.000	N	1.000	P	-0.695	N	-3.4	D	-0.934	T	0.000	T	0.022	-1.511	0.017	-7.5	-3.278	-2.490	1.286	-1.510745	NA	0.07	0.34455	0.306857	NA	0.377	NA	10.2656834
625	20	31805464	31805464	C	A	exonic	BPIFA3	NA	nonsynonymous SNV	BPIFA3:NM_001042439:exon1:c.C122A:p.A41E,BPIFA3:NM_178466:exon1:c.C122A:p.A41E	exonic	ENSG00000131059	NA	nonsynonymous SNV	ENSG00000131059:ENST00000375452:exon1:c.C122A:p.A41E,ENSG00000131059:ENST00000375454:exon1:c.C122A:p.A41E	Score=363;Name=lod=40	NA	20q11.21	NA	NA	NA	NA	rs17124391	0.01	0.01	0.011	0.0081869	0.0239	0.001	0.0115	0.0008	0.0072	0.03	NA	0.02	NA	0.0173	0.03	0.09	T	0.999	D	0.956	D	0.010	N	0.763	N	0.975	L	1.8	T	-1.069	T	0.035	T	0.129	2.336	13.77	0.96	0.222	0.403	5.935	2.336467	2.336467	0	0.02686	0.004539	NA	0.014	NA	10.2652734
625	5	115177207	115177207	T	C	exonic	ATG12	NA	nonsynonymous SNV	ATG12:NM_001277783:exon1:c.A43G:p.I15V,ATG12:NM_004707:exon1:c.A43G:p.I15V	exonic	ENSG00000145782	NA	nonsynonymous SNV	ENSG00000145782:ENST00000274459:exon1:c.A184G:p.I62V,ENSG00000145782:ENST00000379594:exon1:c.A43G:p.I15V,ENSG00000145782:ENST00000500945:exon1:c.A43G:p.I15V,ENSG00000145782:ENST00000509910:exon1:c.A43G:p.I15V,ENSG00000145782:ENST00000513322:exon1:c.A43G:p.I15V	NA	NA	5q22.3	NA	Name=Pol2,NRSF,SP1,Mxi1_(bHLH),PU.1,YY1,Ini1,Pol2(phosphoS2),Egr-1,Sin3Ak-20,YY1_(C-20),HA-E2F1,TAF7_(SQ-8),ZNF263,Pol2-4H8,USF1_(SC-8983),E2F6,Pol2(b),TAF1,ETS1,EBF,WHIP,ELK4,POU2F2,GABP,EBF1_(C-8),TCF12,USF-1,BHLHE40,TBP,GTF2F1_(RAP-74),Max,SUZ12,c-Myc,ELF1_(SC-631),NFKB,HEY1,SETDB1,Oct-2	Name=148	NA	rs74844425	0.01	0.01	0.014	0.013778	0.0258	0.002	0.0159	0.0061	0.0225	0.02	0.0035	0.02	0.01	0.0165	0.033	0.34	T	0.0	B	0.0	B	0.107	N	0.990	N	0	N	.	.	-1.048	T	0.020	T	0.094	1.519	11.03	-4.3	-0.369	-0.491	9.182	1.518606	1.518606	0.44	0.025814	0.009764	NA	0.022	NA	10.2652194
626	3	46945000	46945000	G	A	exonic	PTH1R	NA	nonsynonymous SNV	PTH1R:NM_001184744:exon15:c.G1636A:p.E546K,PTH1R:NM_000316:exon16:c.G1636A:p.E546K	exonic	ENSG00000160801	NA	nonsynonymous SNV	ENSG00000160801:ENST00000422115:exon4:c.G403A:p.E135K,ENSG00000160801:ENST00000313049:exon14:c.G1636A:p.E546K,ENSG00000160801:ENST00000430002:exon15:c.G1636A:p.E546K,ENSG00000160801:ENST00000418619:exon16:c.G1636A:p.E546K,ENSG00000160801:ENST00000449590:exon16:c.G1636A:p.E546K	Score=369;Name=lod=42	NA	3p21.31	NA	NA	NA	NA	rs77048718	0.01	0.01	0.013	0.00858626	0.0278	NA	0.013	0.0015	0.0041	0.03	NA	0.01	0.002	0.0166	0.03	0.85	T	0.07	B	0.016	B	.	.	0.984	N	1.04	L	0.67	T	-0.990	T	0.087	T	0.075	1.742	11.78	1.79	1.319	1.840	3.723	1.741593	1.741593	0	0.025465	0.004085	NA	0.007	NA	10.2634684
626	2	218695102	218695102	G	A	exonic	TNS1	NA	nonsynonymous SNV	TNS1:NM_022648:exon21:c.C3010T:p.R1004W	exonic	ENSG00000079308	NA	nonsynonymous SNV	ENSG00000079308:ENST00000419504:exon20:c.C3010T:p.R1004W,ENSG00000079308:ENST00000171887:exon21:c.C3010T:p.R1004W	Score=399;Name=lod=56	NA	2q35	Score=819;Name=V$RFX1_01	NA	NA	NA	rs3796028	0.39	0.39	0.385	0.375399	0.3648	0.4276	0.4308	0.32	0.3681	0.35	0.45	0.4	0.36	0.363	0.45	0.04	D	0.0	B	0.0	B	0.000	N	0.000	P	0	N	-2.83	D	-0.982	T	0.000	T	0.181	-0.1	3.509	-1.23	-0.055	-0.422	4.230	-0.100132	NA	0.02	0.342558	0.312074	NA	0.37	NA	10.2629754
626	19	37488197	37488197	G	A	exonic	ZNF568	NA	nonsynonymous SNV	ZNF568:NM_001204839:exon9:c.G1412A:p.C471Y,ZNF568:NM_001204838:exon10:c.G1604A:p.C535Y	exonic	ENSG00000198453	NA	nonsynonymous SNV	ENSG00000198453:ENST00000455427:exon9:c.G1412A:p.C471Y,ENSG00000198453:ENST00000444991:exon10:c.G1604A:p.C535Y	Score=425;Name=lod=71	NA	19q13.12	Score=893;Name=V$NKX3A_01	Name=ZNF274	NA	NA	rs1345748	0.47	0.47	0.468	0.496605	0.5109	0.25	0.5346	0.6006	0.5685	0.52	0.26	0.52	0.61	0.5638	0.61	1	T	0.0	B	0.0	B	.	.	0.000	P	-2.3	N	2.72	T	-0.945	T	0.000	T	0.092	-1.145	0.106	3.79	0.628	.	3.457	-1.145078	NA	1	NA	NA	NA	0.493	NA	10.2586334
626	17	79169670	79169670	C	T	exonic	AZI1	NA	nonsynonymous SNV	AZI1:NM_001009811:exon16:c.G1981A:p.E661K,AZI1:NM_014984:exon16:c.G1981A:p.E661K	exonic	ENSG00000141577	NA	nonsynonymous SNV	ENSG00000141577:ENST00000573053:exon3:c.G298A:p.E100K,ENSG00000141577:ENST00000269392:exon16:c.G1990A:p.E664K,ENSG00000141577:ENST00000374782:exon16:c.G1981A:p.E661K,ENSG00000141577:ENST00000450824:exon16:c.G1981A:p.E661K,ENSG00000141577:ENST00000575907:exon16:c.G1990A:p.E664K	NA	NA	17q25.3	NA	NA	NA	NA	rs61741549	0.01	0.01	0.007	0.0175719	0.0278	0.002	0.0086	0.0015	0.0511	0.03	NA	0.01	NA	0.0234	0.03	0.96	T	0.195	B	0.043	B	0.098	N	1.000	N	0.605	N	2.63	T	-0.959	T	0.005	T	0.129	0.351	5.905	3.05	2.120	2.235	2.791	0.351152	NA	0.74	0.024651	0.003406	NA	0.007	NA	10.2574824
626	19	1068738	1068738	G	A	exonic	HMHA1	NA	nonsynonymous SNV	HMHA1:NM_001258328:exon2:c.G464A:p.R155H,HMHA1:NM_012292:exon2:c.G416A:p.R139H	exonic	ENSG00000180448	NA	nonsynonymous SNV	ENSG00000180448:ENST00000313093:exon2:c.G416A:p.R139H,ENSG00000180448:ENST00000539243:exon2:c.G464A:p.R155H,ENSG00000180448:ENST00000586866:exon2:c.G428A:p.R143H,ENSG00000180448:ENST00000587186:exon2:c.G431A:p.R144H,ENSG00000180448:ENST00000590214:exon2:c.G497A:p.R166H	NA	NA	19p13.3	NA	NA	Name=8	NA	rs1801284	0.4	0.4	0.388	0.404752	0.3449	0.3611	0.3862	0.5265	0.3599	0.36	0.4	0.38	0.48	0.3823	0.51	0.15	T	0.008	B	0.002	B	0.854	N	1.000	P	0.895	L	2.01	T	-0.946	T	0.000	T	0.051	-0.171	3.168	-8.44	-4.781	-1.052	16.357	-0.17062	NA	0.22	0.35071	0.509558	NA	0.319	NA	10.2554234
627	19	9060915	9060915	C	T	exonic	MUC16	NA	nonsynonymous SNV	MUC16:NM_024690:exon3:c.G26531A:p.R8844H	exonic	ENSG00000181143	NA	nonsynonymous SNV	ENSG00000181143:ENST00000397910:exon3:c.G26531A:p.R8844H	NA	NA	19p13.2	NA	NA	NA	NA	rs59168469	0.03	0.03	0.016	0.0393371	0.0189	0.0109	0.1182	0.0098	0.0736	0.02	0.01	0.1	0.0041	0.0389	0.1	0	D	0.0	B	0.0	B	.	.	.	.	0	N	1.99	T	-0.995	T	0.001	T	0.076	1.957	12.5	-3.49	-1.368	-0.245	0.807	1.957132	1.957132	0.1	0.021017	0.008354	NA	0.022	NA	10.2545164
627	11	7059981	7059981	G	A	exonic	NLRP14	NA	nonsynonymous SNV	NLRP14:NM_176822:exon2:c.G164A:p.R55Q	exonic	ENSG00000158077	NA	nonsynonymous SNV	ENSG00000158077:ENST00000299481:exon2:c.G164A:p.R55Q	NA	NA	11p15.4	NA	NA	NA	NA	rs61063081	0.11	0.11	0.109	0.096246	0.2147	0.0179	0.1297	0.0666	0.0716	0.21	0.02	0.13	0.05	0.15	0.21	0.46	T	0.999	D	0.898	P	0.238	N	1.000	P	2.415	M	0.6	T	-1.037	T	0.000	T	0.127	2.554	14.5	2.23	0.659	0.751	10.422	2.554234	2.554234	0.27	0.214153	0.084053	NA	0.13	NA	10.2544804
627	4	57176832	57176832	T	C	exonic	KIAA1211	NA	nonsynonymous SNV	KIAA1211:NM_020722:exon6:c.T286C:p.S96P	exonic	ENSG00000109265	NA	nonsynonymous SNV	ENSG00000109265:ENST00000504228:exon4:c.T286C:p.S96P,ENSG00000109265:ENST00000541073:exon5:c.T265C:p.S89P,ENSG00000109265:ENST00000264229:exon6:c.T286C:p.S96P	Score=343;Name=lod=33	NA	4q12	NA	Name=GR	NA	NA	rs79868722	0.07	0.07	0.06	0.0644968	0.0169	0.1875	0.0259	0.0038	0.0961	0.02	0.21	0.04	0.01	0.0428	0.21	.	.	0.008	B	0.009	B	.	.	0.294	P	0.95	L	2.58	T	-0.924	T	0.000	T	0.101	1.13	9.606	-2.32	-0.560	-0.371	6.228	1.129904	NA	0.27	0.019579	0.005227	NA	0.036	NA	10.2540544
627	17	46629593	46629593	G	T	exonic	HOXB3	NA	nonsynonymous SNV	HOXB3:NM_002146:exon3:c.C244A:p.P82T	exonic	ENSG00000120093	NA	nonsynonymous SNV	ENSG00000120093:ENST00000470495:exon1:c.C244A:p.P82T,ENSG00000120093:ENST00000476342:exon2:c.C244A:p.P82T,ENSG00000120093:ENST00000311626:exon3:c.C244A:p.P82T,ENSG00000120093:ENST00000471459:exon3:c.C25A:p.P9T,ENSG00000120093:ENST00000472863:exon3:c.C25A:p.P9T,ENSG00000120093:ENST00000489475:exon4:c.C25A:p.P9T,ENSG00000120093:ENST00000498678:exon4:c.C244A:p.P82T	Score=522;Name=lod=176	NA	17q21.32	NA	NA	Name=3	NA	rs2229304	0.66	0.66	0.636	0.603435	0.7068	0.7976	0.6599	0.3563	0.591	0.71	0.83	0.67	0.37	0.6686	0.83	0.63	T	0.072	B	0.021	B	0.327	U	0.000	P	0.55	N	1.53	T	-0.964	T	0.000	T	0.091	0.005	4.042	3.96	2.203	3.016	16.135	0.005447	NA	NA	0.704329	0.432303	NA	0.58	NA	10.2536044
627	2	37494591	37494591	A	G	exonic	PRKD3	NA	synonymous SNV	PRKD3:NM_005813:exon13:c.T1866C:p.N622N	exonic	ENSG00000115825	NA	synonymous SNV	ENSG00000115825:ENST00000443977:exon5:c.T471C:p.N157N,ENSG00000115825:ENST00000234179:exon13:c.T1866C:p.N622N,ENSG00000115825:ENST00000379066:exon14:c.T1866C:p.N622N	Score=618;Name=lod=435	NA	2p22.2	Score=797;Name=V$XBP1_01	NA	NA	NA	rs2302650	0.15	0.15	0.135	0.191294	0.1362	0.2292	0.1902	0.1074	0.3231	0.12	0.23	0.16	0.08	0.1544	0.23	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.084	T	0.000	T	.	0.79	8.165	3.5	0.707	2.234	10.703	0.790357	NA	NA	0.124535	0.113079	NA	0.246	NA	10.2515316
627	7	82581859	82581859	C	T	exonic	PCLO	NA	nonsynonymous SNV	PCLO:NM_014510:exon5:c.G8410A:p.A2804T,PCLO:NM_033026:exon5:c.G8410A:p.A2804T	exonic	ENSG00000186472	NA	nonsynonymous SNV	ENSG00000186472:ENST00000333891:exon5:c.G8410A:p.A2804T,ENSG00000186472:ENST00000423517:exon5:c.G8410A:p.A2804T	NA	NA	7q21.11	NA	NA	NA	NA	rs976714	0.33	0.33	0.305	0.320088	0.3608	0.4405	0.389	0.1029	0.3988	0.37	0.44	0.37	0.09	0.3614	0.44	0	D	0.001	B	0.001	B	.	.	1.000	P	-0.69	N	2.32	T	-0.905	T	0.000	T	0.014	0.463	6.515	-5.02	-0.998	-1.275	1.692	0.463151	NA	0.91	0.360401	0.137939	NA	0.268	NA	10.2507324
627	11	124947396	124947396	A	G	exonic	SLC37A2	NA	nonsynonymous SNV	SLC37A2:NM_001145290:exon4:c.A286G:p.I96V,SLC37A2:NM_198277:exon4:c.A286G:p.I96V	exonic	ENSG00000134955	NA	nonsynonymous SNV	ENSG00000134955:ENST00000298280:exon4:c.A286G:p.I96V,ENSG00000134955:ENST00000308074:exon4:c.A286G:p.I96V,ENSG00000134955:ENST00000403796:exon4:c.A286G:p.I96V,ENSG00000134955:ENST00000407458:exon4:c.A286G:p.I96V,ENSG00000134955:ENST00000532000:exon4:c.A175G:p.I59V	Score=517;Name=lod=169	NA	11q24.2	NA	NA	NA	NA	rs55752830	0.34	0.34	0.337	0.377196	0.3757	0.1468	0.3689	0.5348	0.409	0.37	0.14	0.39	0.5	0.3542	0.5	0.83	T	0.0	B	0.001	B	0.000	N	1.000	P	-1.445	N	0.41	T	-0.944	T	0.000	T	0.032	-1.091	0.151	3.56	1.128	2.952	10.899	-1.091165	NA	0.85	0.352873	0.485461	NA	0.478	NA	10.2505604
627	11	6891605	6891605	A	G	exonic	OR10A2	NA	nonsynonymous SNV	OR10A2:NM_001004460:exon1:c.A620G:p.H207R	exonic	ENSG00000170790	NA	nonsynonymous SNV	ENSG00000170790:ENST00000307322:exon1:c.A620G:p.H207R	NA	NA	11p15.4	Score=711;Name=V$HOX13_01	NA	NA	NA	rs10839631	0.29	0.29	0.267	0.324481	0.3569	0.3135	0.3732	0.2073	0.4264	0.34	0.3	0.35	0.18	0.3532	0.37	1	T	0.0	B	0.002	B	0.024	N	1.000	P	-0.145	N	8.78	T	-0.975	T	0.000	T	0.015	-3.295	0.001	-2.84	-1.081	-2.861	4.346	-3.294832	NA	1	0.372905	0.201045	NA	0.246	NA	10.2503284
627	14	20874411	20874411	T	C	exonic	TEP1	NA	nonsynonymous SNV	TEP1:NM_007110:exon3:c.A716G:p.H239R	exonic	ENSG00000129566	NA	nonsynonymous SNV	ENSG00000129566:ENST00000262715:exon3:c.A716G:p.H239R,ENSG00000129566:ENST00000555727:exon3:c.A716G:p.H239R,ENSG00000129566:ENST00000556935:exon3:c.A716G:p.H239R	Score=265;Name=lod=16	NA	14q11.2	NA	NA	NA	NA	rs61734876	0.01	0.01	0.011	0.0129792	0.0298	NA	0.0202	0.0023	0.0184	0.03	NA	0.02	NA	0.0245	0.033	0.41	T	0.0	B	0.0	B	0.375	N	1.000	D	-0.69	N	2.69	T	-0.952	T	0.005	T	0.088	-0.295	2.593	2.68	0.491	0.143	6.839	-0.294686	NA	0.46	0.033256	0.008398	ID=COSM328328;OCCURENCE=1(pancreas)	NA	NA	10.2457774
628	19	49407660	49407660	G	A	exonic	NUCB1	NA	synonymous SNV	NUCB1:NM_006184:exon3:c.G192A:p.T64T	exonic	ENSG00000104805	NA	synonymous SNV	ENSG00000104805:ENST00000263273:exon2:c.G192A:p.T64T,ENSG00000104805:ENST00000451312:exon2:c.G192A:p.T64T,ENSG00000104805:ENST00000405315:exon3:c.G192A:p.T64T,ENSG00000104805:ENST00000407032:exon3:c.G192A:p.T64T,ENSG00000104805:ENST00000411700:exon3:c.G192A:p.T64T,ENSG00000104805:ENST00000452087:exon3:c.G192A:p.T64T	Score=539;Name=lod=206	NA	19q13.33	NA	NA	NA	NA	rs1058483	0.06	0.06	0.065	0.0547125	0.1441	0.001	0.062	0.0076	0.0767	0.14	0.0017	0.07	0.01	0.1106	0.17	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.060	T	0.000	T	.	-0.919	0.4	-8.54	-1.883	-6.299	8.591	-0.918842	NA	NA	0.167674	0.03064	NA	0.123	NA	10.2442926
628	1	110466466	110466466	T	C	exonic	CSF1	NA	nonsynonymous SNV	CSF1:NM_000757:exon6:c.T1223C:p.L408P,CSF1:NM_172212:exon6:c.T1223C:p.L408P	exonic	ENSG00000184371	NA	nonsynonymous SNV	ENSG00000184371:ENST00000329608:exon6:c.T1223C:p.L408P,ENSG00000184371:ENST00000369802:exon6:c.T1223C:p.L408P	NA	NA	1p13.3	NA	Name=CTCF	NA	NA	rs1058885	0.43	0.43	0.42	0.421526	0.336	0.5972	0.3271	0.4554	0.3497	0.34	0.61	0.35	0.41	0.3815	0.61	0.33	T	0.002	B	0.007	B	0.584	N	1.000	P	-0.205	N	2.45	T	-0.974	T	0.004	T	0.017	0.858	8.471	-9.14	-2.705	-1.105	3.933	0.857555	NA	0.08	0.372558	0.440309	NA	0.355	NA	10.2432754
628	1	226074563	226074563	T	G	exonic	LEFTY1	NA	nonsynonymous SNV	LEFTY1:NM_020997:exon4:c.A965C:p.D322A	exonic	ENSG00000243709	NA	nonsynonymous SNV	ENSG00000243709:ENST00000272134:exon4:c.A965C:p.D322A	Score=358;Name=lod=38	NA	1q42.12	NA	NA	Name=2	NA	rs360057	0.29	0.29	0.265	0.254792	0.3946	0.2073	0.3415	0.1407	0.2526	0.41	0.21	0.36	0.15	0.3359	0.41	0.41	T	0.0	B	0.0	B	0.016	N	1.000	P	-1.385	N	-0.47	T	-0.965	T	0.000	T	0.093	-1.72	0.011	2.09	0.753	5.788	9.653	-1.720453	NA	0.77	0.360116	0.185429	ID=COSM1339274;OCCURENCE=1(large_intestine)	0.319	NA	10.2427174
628	11	5862845	5862845	A	G	exonic	OR52E6	NA	nonsynonymous SNV	OR52E6:NM_001005167:exon1:c.T283C:p.S95P	exonic	ENSG00000205409	NA	nonsynonymous SNV	ENSG00000205409:ENST00000329322:exon1:c.T283C:p.S95P,ENSG00000205409:ENST00000379946:exon2:c.T295C:p.S99P	NA	NA	11p15.4	NA	NA	NA	NA	rs4592451	0.4	0.4	0.403	0.383986	0.3728	0.4593	0.3184	0.3782	0.3722	0.39	0.46	0.33	0.41	0.3694	0.46	0.06	T	0.904	P	0.616	P	0.086	N	1.000	P	2.24	M	1.0	T	-1.007	T	0.000	T	0.309	2.484	14.27	-4.43	-0.345	-4.844	5.397	2.483961	2.483961	0.03	0.350209	0.367787	NA	0.406	NA	10.2409244
628	2	210905194	210905194	T	C	exonic	KANSL1L	NA	nonsynonymous SNV	KANSL1L:NM_152519:exon8:c.A1979G:p.N660S	exonic	ENSG00000144445	NA	nonsynonymous SNV	ENSG00000144445:ENST00000281772:exon8:c.A1979G:p.N660S,ENSG00000144445:ENST00000418791:exon8:c.A1979G:p.N660S,ENSG00000144445:ENST00000452086:exon8:c.A1979G:p.N660S,ENSG00000144445:ENST00000457374:exon8:c.A1979G:p.N660S	Score=488;Name=lod=128	NA	2q34	NA	NA	NA	NA	rs78815845	0.01	0.01	0.011	0.00938498	0.0278	NA	0.013	0.0008	0.0092	0.03	NA	0.01	NA	0.0282	0.039	0.64	T	0.178	B	0.03	B	0.178	N	0.995	N	0.345	N	.	.	-1.035	T	0.011	T	0.001	1.441	10.76	3.88	0.784	4.292	7.491	1.44062	1.44062	0.15	0.038623	0.007266	NA	0.072	NA	10.2387104
628	3	148757864	148757864	C	T	exonic	HLTF	NA	nonsynonymous SNV	HLTF:NM_003071:exon21:c.G2456A:p.R819H,HLTF:NM_139048:exon21:c.G2456A:p.R819H	exonic	ENSG00000071794	NA	nonsynonymous SNV	ENSG00000071794:ENST00000467858:exon7:c.G860A:p.R287H,ENSG00000071794:ENST00000310053:exon21:c.G2456A:p.R819H,ENSG00000071794:ENST00000392912:exon21:c.G2456A:p.R819H,ENSG00000071794:ENST00000465259:exon21:c.G2453A:p.R818H,ENSG00000071794:ENST00000494055:exon21:c.G2456A:p.R819H	NA	NA	3q24	Score=909;Name=V$USF_02	NA	Name=2	NA	rs2229361	0.02	0.02	0.01	0.0199681	0.0278	0.001	0.0231	0.0008	0.0552	0.03	0.0017	0.03	NA	0.0307	0.037	0.3	T	0.275	B	0.077	B	.	.	1.000	N	0.345	N	-2.36	D	-0.852	T	0.149	T	0.209	0.247	5.332	1.5	0.296	0.927	8.984	0.246511	NA	0.13	0.036761	0.008398	NA	0.029	NA	10.2380724
628	6	32609173	32609173	C	G	exonic	HLA-DQA1	NA	nonsynonymous SNV	HLA-DQA1:NM_002122:exon2:c.C169G:p.Q57E	exonic	ENSG00000196735	NA	nonsynonymous SNV	ENSG00000196735:ENST00000343139:exon2:c.C169G:p.Q57E,ENSG00000196735:ENST00000374949:exon2:c.C169G:p.Q57E,ENSG00000196735:ENST00000395363:exon2:c.C169G:p.Q57E,ENSG00000196735:ENST00000496318:exon2:c.C169G:p.Q57E	NA	NA	6p21.32	NA	Name=Pol2-4H8	NA	NA	rs10093	0.4	0.4	0.195	0.403355	0.4483	0.4216	0.4827	0.2958	0.4274	0.44	0.41	0.44	0.28	0.3552	0.44	0.4	T	0.007	B	0.027	B	0.206	N	1.000	P	0.08	N	5.83	T	-1.036	T	0.011	T	0.588	-2.454	0.003	-7.66	-5.868	-5.842	8.879	-2.453699	NA	0.21	0.292164	0.226488	NA	0.275	NA	10.2376694
628	11	6648424	6648424	G	A	exonic	DCHS1	NA	nonsynonymous SNV	DCHS1:NM_003737:exon14:c.C5846T:p.T1949M	exonic	ENSG00000166341	NA	nonsynonymous SNV	ENSG00000166341:ENST00000299441:exon14:c.C5846T:p.T1949M	NA	NA	11p15.4	Score=848;Name=V$COMP1_01	NA	NA	NA	rs4758443	0.33	0.33	0.315	0.297524	0.3728	0.4236	0.3372	0.1233	0.2975	0.38	0.44	0.34	0.12	0.3559	0.44	0.15	T	0.023	B	0.01	B	0.000	D	1.000	P	2.3	M	4.61	T	-0.948	T	0.000	T	0.068	-0.855	0.539	2.32	0.359	0.935	5.963	-0.85454	NA	0.23	0.367784	0.172194	ID=COSM1356235;OCCURENCE=1(large_intestine)	0.399	NA	10.2368494
628	3	182755209	182755209	T	G	exonic	MCCC1	NA	nonsynonymous SNV	MCCC1:NM_020166:exon13:c.A1391C:p.H464P	exonic	ENSG00000078070	NA	nonsynonymous SNV	ENSG00000078070:ENST00000539926:exon11:c.A986C:p.H329P,ENSG00000078070:ENST00000476176:exon12:c.A1250C:p.H417P,ENSG00000078070:ENST00000492597:exon12:c.A1064C:p.H355P,ENSG00000078070:ENST00000265594:exon13:c.A1391C:p.H464P	Score=431;Name=lod=75	NA	3q27.1	NA	NA	NA	NA	rs2270968	0.48	0.48	0.437	0.464856	0.7346	0.3323	0.6297	0.1929	0.5746	0.72	0.32	0.58	0.22	0.6248	0.74	0.3	T	0.001	B	0.004	B	0.000	D	0.887	P	-1.925	N	-1.43	T	-0.918	T	0.000	T	0.413	1.051	9.294	3.51	0.474	1.118	8.309	1.051243	NA	0.4	0.737093	0.287562	NA	0.406	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000081992.1;CLNDSDB=.;CLNDSDBID=.	10.2368404
629	9	139272045	139272045	C	A	exonic	SNAPC4	NA	nonsynonymous SNV	SNAPC4:NM_003086:exon21:c.G4234T:p.A1412S	exonic	ENSG00000165684	NA	nonsynonymous SNV	ENSG00000165684:ENST00000298532:exon21:c.G4234T:p.A1412S	NA	NA	9q34.3	NA	NA	NA	NA	rs79283598	0.02	0.02	0.02	0.0135783	0.0477	0.001	0.0187	0.0023	0.0031	0.05	0.0017	0.02	0.0041	0.0235	0.05	0.16	T	0.0	B	0.0	B	0.000	N	1.000	N	0.205	N	2.02	T	-1.052	T	0.004	T	0.011	-0.757	0.796	-7.47	-3.382	-2.362	1.689	-0.757231	NA	0.35	0.031781	0.005901	NA	0.094	NA	10.2303524
629	5	140186937	140186937	G	T	exonic	PCDHA4	NA	nonsynonymous SNV	PCDHA4:NM_018907:exon1:c.G165T:p.E55D,PCDHA4:NM_031500:exon1:c.G165T:p.E55D	exonic	ENSG00000204967	NA	nonsynonymous SNV	ENSG00000204967:ENST00000356878:exon1:c.G165T:p.E55D,ENSG00000204967:ENST00000512229:exon1:c.G165T:p.E55D,ENSG00000204967:ENST00000530339:exon1:c.G165T:p.E55D	Score=603;Name=lod=378	NA	5q31.3	Score=825;Name=V$AP4_01	NA	NA	NA	rs11167605	0.32	0.32	0.243	0.331869	0.3738	0.5139	0.415	0.0151	0.4703	0.35	0.52	0.36	0.02	0.3667	0.52	0.16	T	0.011	B	0.028	B	0.001	U	0.000	P	0.765	N	1.65	T	-0.929	T	0.000	T	0.03	1.06	9.328	4.73	2.369	0.274	7.801	1.059892	NA	0.22	0.364038	0.076975	NA	0.29	NA	10.2287954
629	15	66612965	66612965	T	C	exonic	DIS3L	NA	synonymous SNV	DIS3L:NM_001143688:exon9:c.T1221C:p.N407N,DIS3L:NM_133375:exon9:c.T972C:p.N324N	exonic	ENSG00000166938	NA	nonsynonymous SNV	ENSG00000166938:ENST00000441424:exon8:c.T649C:p.W217R	Score=468;Name=lod=106	NA	15q22.31	Score=835;Name=V$GRE_C	NA	NA	NA	rs17851970	0.17	0.17	0.14	0.187899	0.2614	0.1855	0.1686	0.0393	0.3292	0.26	0.13	0.22	0.03	0.2421	0.27	0.07	T	.	.	.	.	.	.	0.000	P	.	.	0.58	T	-1.011	T	0.000	T	.	2.594	14.64	-4.54	-0.986	0.232	8.864	2.594292	2.594292	0	0.268435	0.080191	NA	0.21	NA	10.228065
629	9	95993326	95993326	T	C	exonic	WNK2	NA	synonymous SNV	WNK2:NM_006648:exon3:c.T1011C:p.S337S	exonic	ENSG00000165238	NA	synonymous SNV	ENSG00000165238:ENST00000297954:exon3:c.T1011C:p.S337S,ENSG00000165238:ENST00000395475:exon3:c.T969C:p.S323S,ENSG00000165238:ENST00000395477:exon3:c.T1011C:p.S337S,ENSG00000165238:ENST00000448039:exon3:c.T1011C:p.S337S	Score=452;Name=lod=92	NA	9q22.31	NA	NA	NA	NA	rs11787888	0.11	0.11	0.098	0.148562	0.1541	0.0843	0.111	0.0983	0.3037	0.16	0.07	0.12	0.1	0.149	0.16	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.032	T	0.000	T	.	1.385	10.56	-6.68	-1.726	-1.965	3.288	1.385337	1.385337	NA	0.137326	0.105992	NA	0.152	NA	10.2262406
630	3	195452951	195452951	G	C	exonic	MUC20	NA	nonsynonymous SNV	MUC20:NM_001098516:exon2:c.G859C:p.D287H,MUC20:NM_152673:exon3:c.G964C:p.D322H	exonic	ENSG00000176945	NA	nonsynonymous SNV	ENSG00000176945:ENST00000445522:exon1:c.G1372C:p.D458H,ENSG00000176945:ENST00000436408:exon2:c.G1477C:p.D493H,ENSG00000176945:ENST00000447234:exon2:c.G1477C:p.D493H,ENSG00000176945:ENST00000320736:exon3:c.G964C:p.D322H	NA	NA	3q29	Score=761;Name=V$PAX5_02	NA	NA	NA	rs2688542	0.62	0.62	0.6	NA	NA	NA	NA	NA	NA	0.61	0.79	0.56	0.47	0.6086	0.79	0.2	T	0.969	D	0.642	P	0.291	N	1.000	P	0.895	L	2.67	T	-0.952	T	0.000	T	0.177	0.909	8.698	2.12	0.428	0.431	5.828	0.909135	NA	0.18	NA	NA	ID=COSM446212;OCCURENCE=1(breast)	0.145	NA	10.2247334
630	17	41244936	41244936	G	A	exonic	BRCA1	NA	nonsynonymous SNV	BRCA1:NM_007297:exon9:c.C2471T:p.P824L,BRCA1:NM_007294:exon10:c.C2612T:p.P871L,BRCA1:NM_007300:exon10:c.C2612T:p.P871L	exonic	ENSG00000012048	NA	nonsynonymous SNV	ENSG00000012048:ENST00000309486:exon9:c.C1724T:p.P575L,ENSG00000012048:ENST00000493795:exon9:c.C2471T:p.P824L,ENSG00000012048:ENST00000346315:exon10:c.C2612T:p.P871L,ENSG00000012048:ENST00000354071:exon10:c.C2612T:p.P871L,ENSG00000012048:ENST00000357654:exon10:c.C2612T:p.P871L,ENSG00000012048:ENST00000471181:exon10:c.C2612T:p.P871L	Score=399;Name=lod=56	NA	17q21.31	NA	NA	Name=52	NA	rs799917	0.48	0.48	0.497	0.54393	0.3628	0.371	0.428	0.885	0.5297	0.37	0.33	0.45	0.86	0.41	0.86	1	T	0.0	B	0.0	B	0.001	N	0.000	P	-3.395	N	-0.05	T	-0.937	T	0.000	T	0.255	-0.374	2.24	5.04	0.938	4.246	9.647	-0.374065	NA	1	0.33593	0.800045	ID=COSM148278;OCCURENCE=1(stomach)	0.507	NA	10.2246034
630	5	148680717	148680717	G	A	exonic	AFAP1L1	NA	nonsynonymous SNV	AFAP1L1:NM_001146337:exon4:c.G251A:p.R84Q,AFAP1L1:NM_152406:exon4:c.G251A:p.R84Q	exonic	ENSG00000157510	NA	nonsynonymous SNV	ENSG00000157510:ENST00000296721:exon4:c.G251A:p.R84Q,ENSG00000157510:ENST00000515000:exon4:c.G251A:p.R84Q	Score=489;Name=lod=130	NA	5q32	NA	NA	Name=2	NA	rs61734415	0.02	0.02	0.013	0.0091853	0.0338	NA	0.0101	0.0015	0.0031	0.04	NA	0.02	0.0041	0.0308	0.045	0.75	T	0.052	B	0.007	B	0.012	N	0.669	D	1.01	L	1.03	T	-1.011	T	0.016	T	0.11	0.79	8.165	0.557	0.162	0.499	10.301	0.790456	NA	0.6	0.044651	0.009759	NA	0.007	NA	10.2240824
630	7	143632984	143632984	G	A	exonic	OR2F2	NA	nonsynonymous SNV	OR2F2:NM_001004685:exon1:c.G659A:p.R220Q	exonic	ENSG00000221910	NA	nonsynonymous SNV	ENSG00000221910:ENST00000408955:exon1:c.G659A:p.R220Q	NA	NA	7q35	NA	NA	NA	NA	rs61740239	0.03	0.03	0.022	0.0297524	0.0408	0.0288	0.0202	0.0234	0.0348	0.04	0.03	0.03	0.02	0.0339	0.04	0.35	T	0.0	B	0.005	B	0.896	N	1.000	N	1.095	L	8.89	T	-1.105	T	0.000	T	0.035	-1.247	0.052	-7.02	-1.909	-1.199	8.249	-1.246956	NA	0.37	0.034884	0.028597	NA	0.022	NA	10.2237494
630	15	42148736	42148736	A	G	exonic	SPTBN5	NA	nonsynonymous SNV	SPTBN5:NM_016642:exon53:c.T8869C:p.Y2957H	exonic	ENSG00000137877	NA	nonsynonymous SNV	ENSG00000137877:ENST00000320955:exon53:c.T8869C:p.Y2957H	NA	NA	15q15.1	NA	NA	NA	NA	rs61733880	0.04	0.04	0.044	0.052516	0.0338	NA	0.0245	0.1165	0.0593	0.03	NA	0.02	0.13	0.0481	0.13	0.82	T	0.0	B	0.0	B	0.062	N	1.000	P	-1.845	N	1.39	T	-1.051	T	0.000	T	0.042	-0.199	3.035	5.19	1.196	3.505	13.978	-0.198706	NA	0.69	0.028259	0.089923	NA	0.058	NA	10.2231744
630	2	71297695	71297695	T	C	exonic	NAGK	NA	synonymous SNV	NAGK:NM_017567:exon2:c.T231C:p.D77D	exonic	ENSG00000124357	NA	synonymous SNV	ENSG00000124357:ENST00000244204:exon2:c.T93C:p.D31D,ENSG00000124357:ENST00000455662:exon2:c.T231C:p.D77D	Score=618;Name=lod=432	NA	2p13.3	NA	Name=Znf143_(16618-1-AP),SMC3_(ab9263),CTCF_(SC-5916),Rad21,CTCF	Name=102	NA	rs2287328	0.14	0.14	0.114	0.143371	0.1431	0.1438	0.1729	0.115	0.1605	0.14	0.12	0.18	0.12	0.1476	0.18	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.008	T	0.000	T	.	1.337	10.39	-3.11	-0.245	0.766	6.060	1.337451	1.337451	NA	0.156279	0.141625	NA	0.116	NA	10.2196876
630	7	20768077	20768077	A	T	exonic	ABCB5	NA	nonsynonymous SNV	ABCB5:NM_178559:exon14:c.A1531T:p.I511L,ABCB5:NM_001163941:exon23:c.A2866T:p.I956L	exonic	ENSG00000004846	NA	nonsynonymous SNV	ENSG00000004846:ENST00000441315:exon3:c.A367T:p.I123L,ENSG00000004846:ENST00000258738:exon14:c.A1531T:p.I511L,ENSG00000004846:ENST00000404938:exon23:c.A2866T:p.I956L	Score=512;Name=lod=160	NA	7p21.1	Score=831;Name=V$OCT1_02	NA	NA	NA	rs117497357	0.02	0.02	0.017	0.0139776	0.0378	0.001	0.0259	0.0023	0.0102	0.05	0.0017	0.02	0.002	0.0326	0.05	1	T	0.0	B	0.001	B	0.830	N	1.000	N	-1.225	N	-2.45	D	-0.879	T	0.053	T	0.109	-0.689	1.008	-1.13	-0.196	-0.287	5.759	-0.688653	NA	1	0.046163	0.009079	NA	0.007	NA	10.2167704
630	8	11188743	11188743	C	T	exonic	SLC35G5	NA	nonsynonymous SNV	SLC35G5:NM_054028:exon1:c.C128T:p.A43V	exonic	ENSG00000177710	NA	nonsynonymous SNV	ENSG00000177710:ENST00000382435:exon1:c.C128T:p.A43V	Score=569;Name=lod=273	NA	8p23.1	NA	NA	NA	NA	rs13260331	0.33	0.33	0.251	0.317093	0.3588	0.5833	0.3401	0.0197	0.3855	0.35	0.58	0.33	0.03	0.3688	0.58	0.47	T	0.997	D	0.985	D	0.000	D	0.604	P	0.895	L	1.49	T	-0.938	T	0.000	T	0.094	1.639	11.44	0.34	0.426	0.269	2.848	1.638949	1.638949	0.46	0.389535	0.087154	NA	0.065	NA	10.2161984
630	7	76889354	76889354	G	C	exonic	CCDC146	NA	nonsynonymous SNV	CCDC146:NM_020879:exon8:c.G787C:p.E263Q	exonic	ENSG00000135205	NA	nonsynonymous SNV	ENSG00000135205:ENST00000285871:exon8:c.G787C:p.E263Q,ENSG00000135205:ENST00000431197:exon8:c.G25C:p.E9Q	NA	NA	7q11.23	NA	NA	NA	NA	rs17853516	0.08	0.08	0.079	0.0948482	0.0288	0.0595	0.0375	0.202	0.0951	0.03	0.08	0.04	0.18	0.056	0.18	0.61	T	0.051	B	0.027	B	0.085	N	1.000	P	0.345	N	2.44	T	-0.998	T	0.000	T	0.027	0.183	4.987	4.56	2.741	1.956	15.559	0.183373	NA	0.2	0.032442	0.174081	NA	0.072	NA	10.2160914
630	11	2424541	2424541	C	G	exonic	TSSC4	NA	nonsynonymous SNV	TSSC4:NM_005706:exon2:c.C678G:p.H226Q	exonic	ENSG00000184281	NA	nonsynonymous SNV	ENSG00000184281:ENST00000451491:exon2:c.C678G:p.H226Q,ENSG00000184281:ENST00000333256:exon3:c.C678G:p.H226Q,ENSG00000184281:ENST00000380996:exon4:c.C486G:p.H162Q,ENSG00000184281:ENST00000440813:exon4:c.C486G:p.H162Q	NA	NA	11p15.5	NA	NA	NA	NA	rs2234279	0.13	0.13	0.149	0.133786	0.0258	0.1151	0.0735	0.3411	0.0266	0.02	0.12	0.08	0.34	0.0617	0.34	0.25	T	0.41	B	0.112	B	0.699	U	0.985	P	0.69	N	2.56	T	-1.014	T	0.000	T	0.152	-1.532	0.016	-7.33	-2.708	-1.962	4.793	-1.531603	NA	0.25	0.030123	0.286915	NA	0.101	NA	10.2157104
631	8	77616519	77616519	G	C	exonic	ZFHX4	NA	nonsynonymous SNV	ZFHX4:NM_024721:exon2:c.G196C:p.V66L	exonic	ENSG00000091656	NA	nonsynonymous SNV	ENSG00000091656:ENST00000518282:exon1:c.G196C:p.V66L,ENSG00000091656:ENST00000050961:exon2:c.G196C:p.V66L,ENSG00000091656:ENST00000455469:exon2:c.G196C:p.V66L,ENSG00000091656:ENST00000517585:exon2:c.G196C:p.V66L,ENSG00000091656:ENST00000520307:exon2:c.G196C:p.V66L,ENSG00000091656:ENST00000521891:exon2:c.G196C:p.V66L,ENSG00000091656:ENST00000523885:exon2:c.G196C:p.V66L,ENSG00000091656:ENST00000523809:exon3:c.G196C:p.V66L	Score=849;Name=lod=3768	NA	8q21.11	Score=816;Name=V$IRF1_01	NA	NA	NA	rs56261025	0.02	0.02	0.025	0.0139776	0.0487	NA	0.0187	0.0023	0.0051	0.06	NA	0.02	0.0041	0.0316	0.06	0.29	T	0.104	B	0.028	B	0.117	U	0.988	N	0	N	1.57	T	-1.052	T	0.003	T	0.16	-0.352	2.338	-2.56	-0.739	0.116	2.474	-0.351766	NA	0.19	0.038935	0.006718	NA	0.007	NA	10.2140984
631	1	156202173	156202173	A	G	exonic	PMF1,PMF1-BGLAP	NA	nonsynonymous SNV	PMF1:NM_001199653:exon2:c.A224G:p.Q75R,PMF1-BGLAP:NM_001199661:exon2:c.A224G:p.Q75R,PMF1-BGLAP:NM_001199662:exon2:c.A224G:p.Q75R,PMF1-BGLAP:NM_001199663:exon2:c.A224G:p.Q75R,PMF1:NM_007221:exon2:c.A224G:p.Q75R	exonic	ENSG00000160783,ENSG00000260238	NA	nonsynonymous SNV	ENSG00000260238:ENST00000320139:exon2:c.A224G:p.Q75R,ENSG00000260238:ENST00000368276:exon2:c.A224G:p.Q75R,ENSG00000160783:ENST00000368277:exon2:c.A224G:p.Q75R,ENSG00000160783:ENST00000368279:exon2:c.A224G:p.Q75R,ENSG00000260238:ENST00000490491:exon2:c.A224G:p.Q75R,ENSG00000160783:ENST00000565805:exon2:c.A224G:p.Q75R,ENSG00000160783:ENST00000567140:exon2:c.A224G:p.Q75R	NA	NA	1q22	NA	Name=E2F6_(H-50),MafK_(SC-477),MafK_(ab50322),NF-E2	NA	NA	rs1052053	0.44	0.44	0.437	0.447284	0.3708	0.3313	0.366	0.7065	0.3528	0.38	0.33	0.36	0.71	0.3852	0.71	1	T	0.0	B	0.0	B	0.030	N	1.000	P	-1.5	N	1.61	T	-0.942	T	0.006	T	0.103	-1.191	0.077	4.69	1.429	2.569	8.218	-1.191101	NA	1	0.364419	0.674308	NA	0.457	NA	10.2129144
631	20	44640225	44640225	A	G	exonic	MMP9	NA	nonsynonymous SNV	MMP9:NM_004994:exon6:c.A836G:p.Q279R	exonic	ENSG00000100985	NA	nonsynonymous SNV	ENSG00000100985:ENST00000372330:exon6:c.A836G:p.Q279R	Score=463;Name=lod=102	NA	20q13.12	NA	NA	NA	NA	rs17576	0.45	0.45	0.422	0.455471	0.3807	0.7391	0.2277	0.3442	0.5521	0.39	0.72	0.28	0.35	0.392	0.72	0.28	T	0.004	B	0.01	B	0.302	N	0.988	P	0.145	N	3.03	T	-1.052	T	0.000	T	0.118	1.754	11.82	2.71	1.778	2.309	9.352	1.753923	1.753923	0.31	0.347791	0.347935	NA	0.261	NA	10.2128424
631	12	6554628	6554628	G	A	exonic	CD27	NA	nonsynonymous SNV	CD27:NM_001242:exon2:c.G175A:p.A59T	exonic	ENSG00000139193	NA	nonsynonymous SNV	ENSG00000139193:ENST00000266557:exon2:c.G175A:p.A59T	NA	NA	12p13.31	NA	Name=Pol2	NA	NA	rs25680	0.12	0.12	0.116	0.167532	0.1968	0.0536	0.1239	0.1505	0.3088	0.18	0.02	0.16	0.12	0.1978	0.23	0.59	T	0.473	P	0.265	B	0.273	N	1.000	P	0.895	L	-1.74	D	-1.103	T	0.000	T	0.076	2.22	13.38	2.66	0.513	0.839	6.020	2.21984	2.21984	0.36	0.229884	0.17635	NA	0.188	NA	10.2088494
631	12	3147203	3147203	C	T	exonic	TEAD4	NA	nonsynonymous SNV	TEAD4:NM_201443:exon9:c.C580T:p.P194S,TEAD4:NM_201441:exon10:c.C838T:p.P280S,TEAD4:NM_003213:exon11:c.C967T:p.P323S	exonic	ENSG00000197905	NA	nonsynonymous SNV	ENSG00000197905:ENST00000397122:exon9:c.C580T:p.P194S,ENSG00000197905:ENST00000358409:exon10:c.C838T:p.P280S,ENSG00000197905:ENST00000359864:exon11:c.C967T:p.P323S	NA	NA	12p13.33	NA	NA	NA	NA	rs11550887	0.03	0.03	0.02	0.0239617	0.0467	NA	0.0879	NA	0.0123	0.04	NA	0.1	NA	0.035	0.1	0.98	T	0.007	B	0.002	B	0.000	D	1.000	N	-0.115	N	1.67	T	-1.070	T	0.001	T	0.153	-2.306	0.004	4.77	2.182	-0.052	16.802	-2.305616	NA	0.92	0.045	0.006582	NA	0.029	NA	10.2066334
632	2	11740961	11740961	C	T	exonic	GREB1	NA	nonsynonymous SNV	GREB1:NM_014668:exon16:c.C2369T:p.P790L	exonic	ENSG00000196208	NA	nonsynonymous SNV	ENSG00000196208:ENST00000432985:exon7:c.C1271T:p.P424L,ENSG00000196208:ENST00000234142:exon15:c.C2369T:p.P790L,ENSG00000196208:ENST00000381486:exon16:c.C2369T:p.P790L	NA	NA	2p25.1	Score=776;Name=V$MEF2_01	NA	NA	NA	rs76644468	0.03	0.03	0.02	0.024361	0.0487	NA	0.1009	0.0015	0.001	0.05	NA	0.1	0.0041	0.0412	0.1	0.22	T	0.013	B	0.003	B	0.066	N	0.927	N	1.1	L	3.21	T	-1.122	T	0.003	T	0.027	1.314	10.31	4.06	0.823	2.393	10.556	1.314289	1.314289	0.1	0.039717	0.00686	NA	0.022	NA	10.2037164
632	6	56417545	56417545	T	C	exonic	DST	NA	nonsynonymous SNV	DST:NM_015548:exon42:c.A8176G:p.T2726A,DST:NM_183380:exon52:c.A9154G:p.T3052A,DST:NM_001144770:exon53:c.A9274G:p.T3092A,DST:NM_001144769:exon55:c.A9688G:p.T3230A	exonic	ENSG00000151914	NA	nonsynonymous SNV	ENSG00000151914:ENST00000244364:exon42:c.A8176G:p.T2726A,ENSG00000151914:ENST00000446842:exon48:c.A14440G:p.T4814A,ENSG00000151914:ENST00000370788:exon52:c.A9154G:p.T3052A,ENSG00000151914:ENST00000421834:exon52:c.A9154G:p.T3052A,ENSG00000151914:ENST00000361203:exon57:c.A15412G:p.T5138A,ENSG00000151914:ENST00000370769:exon58:c.A15418G:p.T5140A,ENSG00000151914:ENST00000370754:exon61:c.A15952G:p.T5318A	Score=417;Name=lod=66	NA	6p12.1	NA	Name=MafF_(M8194),MafK_(SC-477)	Name=73	NA	rs4715631	0.69	0.69	0.668	0.662141	0.7247	0.6488	0.7233	0.6089	0.6401	0.75	0.68	0.7	0.6	0.704	0.75	1	T	0.005	B	0.02	B	0.011	N	0.999	P	1.065	L	1.58	T	-0.973	T	0.015	T	0.397	0.699	7.732	2.39	0.184	2.720	8.553	0.699473	NA	0.95	0.70189	0.641645	ID=COSM1445315,COSM1445314;OCCURENCE=1(large_intestine)	0.725	NA	10.2027434
632	1	216011361	216011361	T	C	exonic	USH2A	NA	nonsynonymous SNV	USH2A:NM_206933:exon47:c.A9343G:p.T3115A	exonic	ENSG00000042781	NA	nonsynonymous SNV	ENSG00000042781:ENST00000307340:exon47:c.A9343G:p.T3115A,ENSG00000042781:ENST00000366943:exon47:c.A9343G:p.T3115A	NA	NA	1q41	NA	NA	NA	NA	rs56032526	0.06	0.06	0.047	0.0646965	0.0457	0.1577	0.0533	0.0015	0.0818	0.04	0.14	0.04	0.01	0.0487	0.14	1	T	0.0	B	0.001	B	0.925	N	0.194	P	-0.255	N	0.66	T	-0.937	T	0.001	T	0.04	-0.499	1.71	-5.56	-1.017	0.126	17.253	-0.499351	NA	0.99	0.039767	0.012256	NA	0.036	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000041949.1|RCV000087015.2;CLNDSDB=.|.;CLNDSDBID=.|.	10.1991664
632	6	30131585	30131585	G	A	exonic	TRIM15	NA	nonsynonymous SNV	TRIM15:NM_033229:exon1:c.G124A:p.A42T	exonic	ENSG00000204610	NA	nonsynonymous SNV	ENSG00000204610:ENST00000376688:exon1:c.G124A:p.A42T,ENSG00000204610:ENST00000376694:exon1:c.G124A:p.A42T	NA	NA	6p22.1	NA	NA	NA	NA	rs17194467	0.02	0.02	0.022	0.0169728	0.0487	0.002	0.0317	0.0008	0.0112	0.05	0.01	0.03	0.002	0.0335	0.055	0.57	T	0.126	B	0.041	B	0.026	N	1.000	N	-0.185	N	-2.05	D	-0.891	T	0.114	T	0.027	-0.866	0.512	-7.52	-1.495	-0.915	7.365	-0.866102	NA	0.64	0.055002	0.011597	NA	0.123	NA	10.1961314
633	3	174951756	174951756	T	C	exonic	NAALADL2	NA	nonsynonymous SNV	NAALADL2:NM_207015:exon3:c.T581C:p.M194T	exonic	ENSG00000177694	NA	nonsynonymous SNV	ENSG00000177694:ENST00000454872:exon3:c.T581C:p.M194T	NA	NA	3q26.31	Score=887;Name=V$OCT1_07	NA	NA	NA	rs4371530	0.65	0.65	0.655	0.638778	0.7167	0.6181	0.5749	0.5764	0.7096	0.71	0.66	0.59	0.6	0.6928	0.73	0	D	0.0	B	0.006	B	0.709	N	1.000	P	0	N	1.13	T	-0.953	T	0.000	T	0.017	-0.42	2.04	-3.1	-1.349	-1.106	11.737	-0.420179	NA	0.64	0.733985	0.625682	ID=COSM149518;OCCURENCE=1(stomach)	0.536	NA	10.1898484
633	19	9058907	9058907	G	C	exonic	MUC16	NA	nonsynonymous SNV	MUC16:NM_024690:exon3:c.C28539G:p.H9513Q	exonic	ENSG00000181143	NA	nonsynonymous SNV	ENSG00000181143:ENST00000397910:exon3:c.C28539G:p.H9513Q	NA	NA	19p13.2	NA	NA	NA	NA	rs1833777	0.42	0.42	0.413	0.41893	0.3946	0.503	0.3934	0.3593	0.456	0.4	0.5	0.4	0.36	0.3838	0.5	0	D	0.0	B	0.0	B	.	.	.	.	0	N	1.77	T	-0.935	T	0.000	T	0.024	-0.689	1.009	-4.44	-3.470	-3.662	0.881	-0.688602	NA	0.34	0.365699	0.373676	NA	0.413	NA	10.1892344
633	3	48419897	48419897	C	T	exonic	FBXW12	NA	nonsynonymous SNV	FBXW12:NM_001159929:exon5:c.C439T:p.R147W,FBXW12:NM_207102:exon6:c.C496T:p.R166W	exonic	ENSG00000164049	NA	nonsynonymous SNV	ENSG00000164049:ENST00000436231:exon3:c.C25T:p.R9W,ENSG00000164049:ENST00000445170:exon5:c.C439T:p.R147W,ENSG00000164049:ENST00000296438:exon6:c.C496T:p.R166W	NA	NA	3p21.31	NA	NA	NA	NA	rs6442117	0.62	0.62	0.616	0.619409	0.5298	0.6597	0.6225	0.6021	0.6912	0.54	0.67	0.62	0.65	0.5907	0.67	0.03	D	0.616	P	0.011	B	0.000	N	1.000	P	0	N	1.51	T	-0.944	T	0.000	T	0.107	1.24	10.03	-8.47	-3.246	-1.945	0.454	1.240004	1.240004	0.02	0.527209	0.599864	NA	0.529	NA	10.1856244
634	19	9003618	9003618	C	T	exonic	MUC16	NA	nonsynonymous SNV	MUC16:NM_024690:exon49:c.G40022A:p.R13341H	exonic	ENSG00000181143	NA	nonsynonymous SNV	ENSG00000181143:ENST00000397910:exon49:c.G40022A:p.R13341H	NA	NA	19p13.2	Score=772;Name=V$TAXCREB_02	NA	NA	NA	rs11085776	0.65	0.65	0.55	0.620008	0.7177	0.6071	0.7291	0.4599	0.6718	0.69	0.67	0.72	0.5	0.6923	0.74	0	D	0.229	B	0.044	B	.	.	.	.	.	.	1.57	T	-1.102	T	0.000	T	0.046	0.047	4.257	-6.47	-2.840	-4.861	10.886	0.046692	NA	0.24	0.742059	0.549853	NA	0.543	NA	10.1812744
634	5	70858342	70858342	A	G	exonic	BDP1	NA	nonsynonymous SNV	BDP1:NM_018429:exon38:c.A7738G:p.T2580A	exonic	ENSG00000145734	NA	nonsynonymous SNV	ENSG00000145734:ENST00000525844:exon12:c.A1804G:p.T602A,ENSG00000145734:ENST00000358731:exon38:c.A7738G:p.T2580A	NA	NA	5q13.2	NA	NA	NA	NA	rs115185087	0.04	0.04	0.026	0.0367412	0.0507	0.001	0.1354	0.0015	0.0368	0.04	NA	0.13	0.0041	0.0525	0.13	1	T	0.001	B	0.002	B	0.923	N	0.876	D	0.055	N	3.92	T	-0.921	T	0.000	T	0.016	-0.786	0.715	-11.3	-1.884	-1.312	11.162	-0.785678	NA	1	0.049621	0.013022	NA	0.014	NA	10.1805124
634	19	12772165	12772165	G	A	exonic	MAN2B1	NA	nonsynonymous SNV	MAN2B1:NM_000528:exon7:c.C935T:p.T312I,MAN2B1:NM_001173498:exon7:c.C935T:p.T312I	exonic	ENSG00000104774	NA	nonsynonymous SNV	ENSG00000104774:ENST00000221363:exon7:c.C935T:p.T312I,ENSG00000104774:ENST00000456935:exon7:c.C935T:p.T312I	Score=529;Name=lod=189	NA	19p13.2	NA	NA	NA	NA	rs1054487	0.32	0.32	0.336	0.327875	0.4036	0.0615	0.281	0.584	0.2117	0.39	0.05	0.31	0.54	0.3398	0.54	1	T	0.003	B	0.023	B	0.263	N	0.996	P	-1.95	N	-0.96	T	-0.962	T	0.000	T	0.072	-1.241	0.054	-2.19	-0.506	1.938	11.254	-1.240886	NA	1	0.410814	0.536995	ID=COSM1178457;OCCURENCE=1(prostate)	0.399	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000079081.3;CLNDSDB=.;CLNDSDBID=.	10.1791194
634	3	124515509	124515509	G	A	exonic	ITGB5	NA	synonymous SNV	ITGB5:NM_002213:exon10:c.C1419T:p.S473S	exonic	ENSG00000082781	NA	synonymous SNV	ENSG00000082781:ENST00000296181:exon10:c.C1419T:p.S473S	Score=369;Name=lod=42	NA	3q21.2	Score=861;Name=V$HAND1E47_01	Name=Pol2	NA	NA	rs2291088	0.16	0.16	0.132	0.163139	0.1521	0.1657	0.2565	0.118	0.1667	0.14	0.19	0.23	0.12	0.175	0.23	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.064	T	0.000	T	.	-0.908	0.422	1.33	0.054	2.252	9.290	-0.907623	NA	NA	0.161279	0.123241	NA	0.116	NA	10.1782876
634	1	155019710	155019710	A	C	exonic	DCST1	NA	nonsynonymous SNV	DCST1:NM_001143687:exon13:c.A1459C:p.M487L,DCST1:NM_152494:exon14:c.A1534C:p.M512L	exonic	ENSG00000163357	NA	nonsynonymous SNV	ENSG00000163357:ENST00000368419:exon13:c.A1534C:p.M512L,ENSG00000163357:ENST00000423025:exon13:c.A1459C:p.M487L,ENSG00000163357:ENST00000295542:exon14:c.A1534C:p.M512L,ENSG00000163357:ENST00000392480:exon14:c.A1534C:p.M512L	Score=381;Name=lod=47	NA	1q22	NA	NA	NA	NA	rs11264300	0.53	0.53	0.506	0.554513	0.3569	0.8849	0.5865	0.3858	0.6227	0.36	0.9	0.53	0.36	0.4524	0.9	0.89	T	0.016	B	0.022	B	0.000	N	0.852	P	0.93	L	1.62	T	-1.017	T	0.017	T	0.109	1.757	11.83	3.73	0.960	3.293	8.753	1.756878	1.756878	0.14	0.346977	0.40808	ID=COSM1559945;OCCURENCE=1(large_intestine)	0.478	NA	10.1770564
634	1	12942990	12942990	A	G	exonic	PRAMEF4	NA	nonsynonymous SNV	PRAMEF4:NM_001009611:exon2:c.T226C:p.C76R	exonic	ENSG00000243073	NA	nonsynonymous SNV	ENSG00000243073:ENST00000235349:exon2:c.T226C:p.C76R	NA	NA	1p36.21	NA	NA	NA	NA	rs143934691	0.02	0.02	NA	0.0199681	0.0646	0.001	0.0303	0.0008	0.0123	0.04	NA	0.02	NA	0.041	0.051	0.12	T	0.919	P	0.586	P	0.032	N	1.000	N	1.04	L	3.73	T	-1.058	T	0.003	T	0.182	0.674	7.608	-2.96	-1.446	-0.437	3.695	0.674144	NA	0.11	0.051028	0.009835	NA	NA	NA	10.1767054
634	17	7366348	7366348	A	C	exonic	ZBTB4	NA	nonsynonymous SNV	ZBTB4:NM_001128833:exon4:c.T1953G:p.D651E,ZBTB4:NM_020899:exon4:c.T1953G:p.D651E	exonic	ENSG00000174282	NA	nonsynonymous SNV	ENSG00000174282:ENST00000311403:exon4:c.T1953G:p.D651E,ENSG00000174282:ENST00000380599:exon4:c.T1953G:p.D651E	NA	NA	17p13.1	NA	Name=ZNF263	NA	NA	rs78260319	0.1	0.1	0.057	0.124002	0.0427	0.2381	0.2536	0.0726	0.0675	0.04	0.16	0.15	0.09	0.0883	0.16	0.99	T	0.0	B	0.0	B	0.639	N	1.000	P	0	N	1.67	T	-1.079	T	0.000	T	0.123	-1.316	0.034	-10.2	-3.239	-2.586	5.424	-1.315815	NA	1	0.027093	0.071039	NA	0.014	NA	10.1752404
635	6	32629764	32629764	C	T	exonic	HLA-DQB1	NA	nonsynonymous SNV	HLA-DQB1:NM_001243961:exon3:c.G641A:p.S214N,HLA-DQB1:NM_002123:exon3:c.G641A:p.S214N	exonic	ENSG00000179344	NA	nonsynonymous SNV	ENSG00000179344:ENST00000399082:exon2:c.G371A:p.S124N,ENSG00000179344:ENST00000374943:exon3:c.G641A:p.S214N,ENSG00000179344:ENST00000399079:exon3:c.G641A:p.S214N,ENSG00000179344:ENST00000434651:exon3:c.G641A:p.S214N,ENSG00000179344:ENST00000399084:exon4:c.G641A:p.S214N	Score=414;Name=lod=64	NA	6p21.32	Score=792;Name=V$OLF1_01	Name=Pol2-4H8	NA	NA	rs1130398	0.43	0.43	0.383	0.395567	0.3946	0.4782	0.5476	0.3154	0.3119	0.4	0.49	0.52	0.31	0.4056	0.52	0.04	D	0.0	B	0.001	B	0.396	N	1.000	P	.	.	4.09	T	-0.922	T	0.003	T	0.054	0.352	5.911	1.62	0.319	-0.126	3.541	0.352128	NA	0.09	0.359637	0.296996	NA	0.036	NA	10.1734964
635	9	99581811	99581811	C	T	exonic	ZNF782	NA	nonsynonymous SNV	ZNF782:NM_001001662:exon6:c.G494A:p.R165H	exonic	ENSG00000196597	NA	nonsynonymous SNV	ENSG00000196597:ENST00000535338:exon3:c.G98A:p.R33H,ENSG00000196597:ENST00000478850:exon5:c.G494A:p.R165H,ENSG00000196597:ENST00000481138:exon6:c.G494A:p.R165H	NA	NA	9q22.33	NA	Name=SETDB1	NA	NA	rs4645656	0.25	0.25	0.307	0.272364	0.0318	0.3185	0.0735	0.6271	0.1339	0.03	0.34	0.07	0.62	0.1083	0.62	0.5	T	0.0	B	0.0	B	.	.	1.000	P	0.345	N	5.86	T	-0.984	T	0.000	T	0.258	0.34	5.842	-4.0	-1.320	-0.145	3.225	0.339619	NA	NA	0.020465	0.545166	ID=COSM150638;OCCURENCE=1(stomach)	0.225	NA	10.1727684
635	22	46644177	46644177	G	A	exonic	CDPF1	NA	nonsynonymous SNV	CDPF1:NM_207327:exon2:c.C5T:p.A2V	exonic	ENSG00000205643	NA	nonsynonymous SNV	ENSG00000205643:ENST00000404583:exon1:c.C5T:p.A2V,ENSG00000205643:ENST00000404744:exon1:c.C5T:p.A2V,ENSG00000205643:ENST00000314567:exon2:c.C5T:p.A2V,ENSG00000205643:ENST00000381037:exon2:c.C5T:p.A2V	Score=361;Name=lod=39	NA	22q13.31	Score=848;Name=V$TAL1BETAITF2_01	NA	NA	NA	rs61748935	0.06	0.06	0.061	0.0786741	0.0497	0.002	0.0389	0.2156	0.0307	0.03	0.0017	0.05	0.2	0.0613	0.2	0.07	T	0.055	B	0.02	B	0.183	N	0.000	P	1.61	L	1.35	T	-1.076	T	0.000	T	0.091	1.999	12.64	3.35	0.605	0.766	5.947	1.999342	1.999342	0.05	0.051628	0.180436	NA	0.145	NA	10.1707054
635	22	20074006	20074006	A	G	exonic	DGCR8	NA	nonsynonymous SNV	DGCR8:NM_001190326:exon2:c.A520G:p.I174V,DGCR8:NM_022720:exon2:c.A520G:p.I174V	exonic	ENSG00000128191	NA	nonsynonymous SNV	ENSG00000128191:ENST00000407755:exon1:c.A520G:p.I174V,ENSG00000128191:ENST00000351989:exon2:c.A520G:p.I174V,ENSG00000128191:ENST00000383024:exon2:c.A520G:p.I174V	NA	NA	22q11.21	NA	Name=Pol2(b)	NA	NA	rs35987994	0.04	0.04	0.04	0.0505192	0.0547	0.0813	0.0101	0.0045	0.1053	0.06	0.07	0.01	0.0041	0.054	0.07	0.49	T	0.0	B	0.0	B	0.336	N	1.000	N	0	N	1.59	T	-1.082	T	0.003	T	0.02	-1.13	0.118	-10.8	-3.838	-1.110	4.334	-1.129884	NA	1	0.054535	0.011802	NA	0.043	NA	10.1700984
635	1	210004199	210004199	C	G	exonic	DIEXF	NA	nonsynonymous SNV	DIEXF:NM_014388:exon3:c.C199G:p.Q67E	exonic	ENSG00000117597	NA	nonsynonymous SNV	ENSG00000117597:ENST00000491415:exon3:c.C199G:p.Q67E	Score=538;Name=lod=205	NA	1q32.2	NA	NA	Name=5	NA	rs585627	0.6	0.6	0.61	0.590056	0.7286	0.3859	0.5418	0.6074	0.6687	0.72	0.41	0.61	0.63	0.673	0.76	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-2.045	N	1.17	T	-0.936	T	0.000	T	0.06	-0.237	2.855	5.02	1.248	5.518	15.931	-0.237372	NA	1	0.76186	0.588516	ID=COSM1338527;OCCURENCE=1(large_intestine)	0.71	NA	10.1698734
635	11	102584104	102584104	T	G	exonic	MMP8	NA	nonsynonymous SNV	MMP8:NM_002424:exon10:c.A1379C:p.K460T	exonic	ENSG00000118113	NA	nonsynonymous SNV	ENSG00000118113:ENST00000236826:exon10:c.A1379C:p.K460T	NA	NA	11q22.2	Score=810;Name=V$RSRFC4_01	NA	NA	NA	rs35866072	0.08	0.08	0.079	0.0882588	0.0437	0.0089	0.0591	0.2224	0.0552	0.04	0.01	0.06	0.25	0.0663	0.25	0.19	T	0.004	B	0.01	B	.	.	1.000	P	-0.405	N	2.57	T	-0.916	T	0.000	T	0.052	0.473	6.566	-8.0	-1.793	-0.226	3.810	0.472756	NA	0.09	0.053617	0.199501	NA	0.087	NA	10.1697164
635	11	5221645	5221645	C	G	exonic	OR51V1	NA	nonsynonymous SNV	OR51V1:NM_001004760:exon1:c.G286C:p.G96R	exonic	ENSG00000176742	NA	nonsynonymous SNV	ENSG00000176742:ENST00000321255:exon1:c.G286C:p.G96R	Score=278;Name=lod=18	NA	11p15.4	NA	NA	NA	NA	rs11512276	NA	NA	NA	0.279952	0.3449	0.3423	0.2277	0.2436	0.2352	NA	NA	NA	NA	0.3192	0.32	0.01	D	0.529	P	0.443	B	0.059	N	0.999	N	1.385	L	4.37	T	-0.985	T	0.010	T	0.392	2.094	12.96	3.64	0.897	0.474	5.075	2.093996	2.093996	0.19	NA	NA	NA	0.326	NA	10.1692334
635	6	31239407	31239407	G	T	exonic	HLA-C	NA	nonsynonymous SNV	HLA-C:NM_001243042:exon2:c.C312A:p.N104K,HLA-C:NM_002117:exon2:c.C312A:p.N104K	exonic	ENSG00000204525	NA	nonsynonymous SNV	ENSG00000204525:ENST00000376228:exon2:c.C312A:p.N104K,ENSG00000204525:ENST00000376237:exon2:c.C312A:p.N104K,ENSG00000204525:ENST00000383329:exon2:c.C312A:p.N104K	NA	NA	6p21.33	Score=837;Name=V$NFY_C	Name=CTCF,NFKB,RFX5_(N-494),Pol2,Pol2-4H8	Name=31	NA	rs17408553	0.36	0.36	0.348	0.386981	0.4115	0.1399	0.3862	0.5408	0.409	0.41	0.14	0.39	0.53	0.3786	0.54	0.19	T	0.059	B	0.172	B	0.580	U	1.000	P	2.35	M	5.85	T	-1.018	T	0.086	T	0.452	0.569	7.072	-0.203	-0.060	-0.046	3.497	0.568503	NA	0.31	0.375784	0.535407	NA	0.101	NA	10.1674494
635	2	202490812	202490812	C	A	exonic	TMEM237	NA	nonsynonymous SNV	TMEM237:NM_001044385:exon11:c.G1096T:p.A366S,TMEM237:NM_152388:exon11:c.G1072T:p.A358S	exonic	ENSG00000155755	NA	nonsynonymous SNV	ENSG00000155755:ENST00000409444:exon12:c.G1072T:p.A358S,ENSG00000155755:ENST00000409883:exon12:c.G1096T:p.A366S	Score=551;Name=lod=232	NA	2q33.1	NA	NA	NA	NA	rs73989521	0.06	0.06	0.065	0.0625	0.0447	NA	0.0447	0.174	0.0072	0.05	NA	0.04	0.15	0.0686	0.15	0.17	T	0.126	B	0.031	B	0.000	D	0.002	P	0.885	L	.	.	-1.084	T	0.001	T	0.079	2.168	13.2	1.98	0.069	0.711	6.038	2.167621	2.167621	0.23	0.053733	0.149099	NA	0.058	CLINSIG=probable-non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000118633.2|RCV000125531.1;CLNDSDB=.|.;CLNDSDBID=.|.	10.1663004
635	20	45947853	45947853	T	A	ncRNA_exonic	LOC100131496	NA	NA	NA	exonic	ENSG00000267882	NA	synonymous SNV	ENSG00000267882:ENST00000599904:exon1:c.T489A:p.T163T	Score=415;Name=lod=65	NA	20q13.12	Score=955;Name=V$NCX_01	Name=Pol2-4H8,JunD,TCF4,Pol2,TAF1,ELF1_(SC-631)	Name=136	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0004	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.553066	2.553066	NA	NA	NA	NA	NA	NA	10.1662666
635	18	14105016	14105016	C	A	exonic	ZNF519	NA	nonsynonymous SNV	ZNF519:NM_145287:exon3:c.G1523T:p.R508I	exonic	ENSG00000175322	NA	nonsynonymous SNV	ENSG00000175322:ENST00000590202:exon3:c.G1523T:p.R508I	Score=446;Name=lod=87	NA	18p11.21	NA	Name=SETDB1	NA	NA	rs61609068	0.31	0.31	0.306	0.292133	0.1958	0.6597	0.2622	0.112	0.2771	0.19	0.67	0.24	0.11	0.2535	0.67	0.24	T	0.857	P	0.299	B	.	.	0.000	P	2.365	M	.	.	-0.928	T	0.000	T	0.12	0.332	5.798	0.646	0.661	0.368	7.223	0.331605	NA	NA	0.218837	0.13005	NA	0.232	NA	10.1651964
636	16	72107865	72107865	C	T	exonic	HPR	NA	nonsynonymous SNV	HPR:NM_020995:exon2:c.C80T:p.T27M	exonic	ENSG00000261701	NA	nonsynonymous SNV	ENSG00000261701:ENST00000228226:exon1:c.C191T:p.T64M,ENSG00000261701:ENST00000356967:exon2:c.C80T:p.T27M,ENSG00000261701:ENST00000540303:exon2:c.C80T:p.T27M,ENSG00000261701:ENST00000561690:exon2:c.C80T:p.T27M	NA	NA	16q22.2	NA	Name=Pol2	Name=22	NA	rs11642506	0.03	0.03	0.031	0.0245607	0.0567	NA	0.0259	0.0008	0.0481	0.06	NA	0.03	NA	0.0513	0.061	0.09	T	0.02	B	0.008	B	0.980	N	1.000	N	0.92	L	-2.4	D	-0.802	T	0.100	T	0.07	-0.629	1.213	0.581	0.222	0.396	4.141	-0.629181	NA	0.19	0.060652	0.012389	NA	0.022	NA	10.1646814
636	4	9922167	9922167	C	T	exonic	SLC2A9	NA	nonsynonymous SNV	SLC2A9:NM_020041:exon7:c.G844A:p.V282I,SLC2A9:NM_001001290:exon8:c.G757A:p.V253I	exonic	ENSG00000109667	NA	nonsynonymous SNV	ENSG00000109667:ENST00000264784:exon7:c.G844A:p.V282I,ENSG00000109667:ENST00000309065:exon8:c.G757A:p.V253I,ENSG00000109667:ENST00000506583:exon9:c.G757A:p.V253I	Score=304;Name=lod=23	Name=Uric acid levels,Urate levels	4p16.1	NA	NA	NA	NA	rs16890979	0.22	0.22	0.224	0.263778	0.2137	0.0129	0.3818	0.4803	0.1973	0.2	0.01	0.33	0.43	0.2395	0.43	.	.	0.693	P	0.206	B	0.000	N	0.905	P	1.56	L	-0.93	T	-0.980	T	0.000	T	0.027	0.959	8.913	1.61	-0.007	1.648	9.693	0.959077	NA	0.28	0.220698	0.414435	NA	0.188	NA	10.1594354
636	6	30458064	30458064	G	A	exonic	HLA-E	NA	nonsynonymous SNV	HLA-E:NM_005516:exon3:c.G382A:p.G128R	exonic	ENSG00000204592	NA	nonsynonymous SNV	ENSG00000204592:ENST00000376630:exon3:c.G382A:p.G128R	Score=284;Name=lod=19	NA	6p21.33	NA	Name=IRF1,RFX5_(N-494),Pol2-4H8,E2F6,E2F6_(H-50)	Name=119	NA	rs1264457	0.51	0.51	0.539	0.514377	0.5676	0.3433	0.5331	0.5726	0.544	0.58	0.36	0.51	0.57	0.5391	0.58	0.01	D	0.696	P	0.073	B	0.222	N	0.989	P	.	.	9.11	T	-1.271	T	0.000	T	0.021	2.084	12.92	0.764	0.265	0.815	4.3	2.083505	2.083505	0.05	0.567737	0.559973	NA	0.558	NA	10.1588964
636	10	102046380	102046380	T	G	exonic	BLOC1S2	NA	nonsynonymous SNV	BLOC1S2:NM_173809:exon1:c.A37C:p.S13R	exonic	ENSG00000196072	NA	nonsynonymous SNV	ENSG00000196072:ENST00000370372:exon1:c.A37C:p.S13R	NA	NA	10q24.31	NA	Name=Oct-2,ELF1_(SC-631),YY1_(C-20),Mxi1_(bHLH),Pol2,Pol2(phosphoS2),POU2F2,GABP,TAF1,TBP,Nrf1,NFKB,HEY1,ZEB1_(SC-25388),Sin3Ak-20,Pol2-4H8,YY1,ELK4	Name=145	NA	rs33965491	0.08	0.08	0.075	0.0952476	0.0586	0.0605	0.062	0.174	0.0859	0.06	0.07	0.07	0.13	0.0635	0.13	0.58	T	0.0	B	0.0	B	0.999	N	1.000	P	0	N	.	.	-1.037	T	0.001	T	0.055	0.217	5.17	2.66	0.234	0.309	10.690	0.216979	NA	0.77	0.05284	0.126706	NA	0.058	NA	10.1583934
636	19	58420699	58420699	C	A	exonic	ZNF417	NA	nonsynonymous SNV	ZNF417:NM_152475:exon3:c.G947T:p.R316L	exonic	ENSG00000173480	NA	nonsynonymous SNV	ENSG00000173480:ENST00000312026:exon3:c.G947T:p.R316L,ENSG00000173480:ENST00000595559:exon3:c.G944T:p.R315L,ENSG00000173480:ENST00000536263:exon4:c.G350T:p.R117L	NA	NA	19q13.43	NA	NA	NA	NA	rs3745133	0.3	0.3	0.248	0.33746	0.3499	0.2817	0.2911	0.4153	0.3098	0.33	0.21	0.3	0.34	0.3259	0.34	0.02	D	0.627	P	0.236	B	.	.	1.000	P	1.86	L	1.82	T	-0.989	T	0.000	T	0.174	0.881	8.577	-2.01	-0.691	-2.414	7.886	0.881369	NA	0.1	NA	NA	ID=COSM148790;OCCURENCE=1(stomach)	0.181	NA	10.1575334
637	19	10088271	10088271	C	G	exonic	COL5A3	NA	nonsynonymous SNV	COL5A3:NM_015719:exon42:c.G3125C:p.R1042P	exonic	ENSG00000080573	NA	nonsynonymous SNV	ENSG00000080573:ENST00000264828:exon42:c.G3125C:p.R1042P	Score=456;Name=lod=95	NA	19p13.2	NA	NA	NA	NA	rs2161468	0.36	0.36	0.362	0.35024	0.3946	0.3313	0.2522	0.3389	0.409	0.39	0.36	0.27	0.37	0.3803	0.4	1	T	0.018	B	0.001	B	0.001	N	1.000	P	-0.465	N	-2.61	D	-1.047	T	0.000	T	0.083	-1.324	0.033	2.68	0.256	4.928	6.561	-1.324178	NA	1	0.403953	0.36246	NA	0.268	NA	10.1544804
637	3	49343175	49343175	G	A	exonic	USP4	NA	synonymous SNV	USP4:NM_199443:exon8:c.C960T:p.D320D,USP4:NM_003363:exon9:c.C1101T:p.D367D	exonic	ENSG00000114316	NA	synonymous SNV	ENSG00000114316:ENST00000351842:exon8:c.C960T:p.D320D,ENSG00000114316:ENST00000265560:exon9:c.C1101T:p.D367D	NA	NA	3p21.31	Score=854;Name=V$ARNT_01	Name=EBF,EBF1_(C-8)	Name=5	NA	rs2230929	0.13	0.13	0.121	0.0916534	0.1968	0.0546	0.098	0.0651	0.0532	0.2	0.07	0.14	0.07	0.144	0.2	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.996	T	0.000	T	.	0.096	4.516	-11.4	-2.469	-0.668	16.227	0.095814	NA	NA	0.173372	0.096686	ID=COSM149389;OCCURENCE=1(stomach)	0.196	NA	10.1524946
637	1	152732106	152732106	A	T	exonic	KPRP	NA	nonsynonymous SNV	KPRP:NM_001025231:exon2:c.A42T:p.Q14H	exonic	ENSG00000203786	NA	nonsynonymous SNV	ENSG00000203786:ENST00000606109:exon1:c.A42T:p.Q14H,ENSG00000203786:ENST00000368773:exon2:c.A42T:p.Q14H	Score=363;Name=lod=40	NA	1q21.3	Score=821;Name=V$TCF11MAFG_01	NA	NA	NA	rs17612167	0.16	0.16	0.12	0.177117	0.2256	0.2262	0.1441	0.0106	0.3252	0.24	0.19	0.14	0.02	0.2249	0.24	0.02	D	0.681	P	0.264	B	0.051	N	1.000	P	0	N	2.71	T	-0.927	T	0.007	T	0.067	2.367	13.87	-0.206	0.066	-0.281	8.327	2.367214	2.367214	0.16	0.232209	0.04335	NA	0.101	NA	10.1506244
637	2	206305156	206305156	C	T	exonic	PARD3B	NA	nonsynonymous SNV	PARD3B:NM_057177:exon19:c.C2597T:p.T866I,PARD3B:NM_152526:exon19:c.C2618T:p.T873I	exonic	ENSG00000116117	NA	nonsynonymous SNV	ENSG00000116117:ENST00000351153:exon19:c.C2597T:p.T866I,ENSG00000116117:ENST00000358768:exon19:c.C2618T:p.T873I,ENSG00000116117:ENST00000406610:exon20:c.C2804T:p.T935I	NA	NA	2q33.3	NA	NA	NA	NA	rs10185378	0.07	0.07	0.064	0.0670927	0.0567	0.001	0.0461	0.1778	0.0112	0.05	0.0017	0.06	0.18	0.0582	0.18	0.36	T	0.051	B	0.027	B	0.071	N	1.000	P	1.59	L	1.57	T	-1.083	T	0.000	T	0.056	-2.065	0.006	4.42	2.670	1.819	8.742	-2.064669	NA	0.55	0.06875	0.175978	NA	0.087	NA	10.1496834
637	2	44071743	44071743	A	G	exonic	ABCG8	NA	nonsynonymous SNV	ABCG8:NM_022437:exon2:c.A161G:p.Y54C	exonic	ENSG00000143921	NA	nonsynonymous SNV	ENSG00000143921:ENST00000272286:exon2:c.A161G:p.Y54C	Score=601;Name=lod=371	NA	2p21	NA	NA	NA	NA	rs4148211	0.44	0.44	0.373	0.434704	0.3708	0.8512	0.3501	0.1293	0.544	0.39	0.86	0.32	0.12	0.4287	0.86	0.06	T	0.321	B	0.191	B	0.000	N	0.000	P	1.1	L	-2.38	D	-0.942	T	0.000	T	0.265	2.737	15.11	4.12	0.856	5.345	10.976	2.737366	2.737366	0.05	0.385233	0.195188	NA	0.304	NA	10.1486004
637	3	149468530	149468530	T	G	exonic	COMMD2	NA	nonsynonymous SNV	COMMD2:NM_016094:exon4:c.A337C:p.I113L	exonic	ENSG00000114744	NA	nonsynonymous SNV	ENSG00000114744:ENST00000473414:exon4:c.A337C:p.I113L,ENSG00000114744:ENST00000491617:exon4:c.A337C:p.I113L	Score=313;Name=lod=25	NA	3q25.1	NA	NA	NA	NA	rs9843784	0.26	0.26	0.238	0.239018	0.4085	0.25	0.268	0.0446	0.2955	0.42	0.23	0.26	0.04	0.3531	0.42	0.31	T	0.016	B	0.011	B	0.000	D	0.017	P	1.475	L	3.07	T	-0.913	T	0.000	T	0.141	2.663	14.86	2.7	0.927	2.382	11.807	2.662649	2.662649	0.17	0.423372	0.111439	NA	0.254	NA	10.1483614
637	3	133547692	133547692	G	A	exonic	RAB6B	NA	synonymous SNV	RAB6B:NM_016577:exon8:c.C567T:p.I189I	exonic	ENSG00000154917	NA	synonymous SNV	ENSG00000154917:ENST00000285208:exon8:c.C567T:p.I189I,ENSG00000154917:ENST00000543906:exon8:c.C567T:p.I189I,ENSG00000154917:ENST00000486858:exon9:c.C528T:p.I176I	Score=622;Name=lod=451	NA	3q22.1	Score=798;Name=V$COMP1_01	Name=SP2_(SC-643),NF-YA,c-Fos,NF-YB,IRF1	Name=9	Score=90;Name=1639988_0_-_90	rs2293373	0.2	0.2	0.165	0.202476	0.171	0.3869	0.2666	0.0091	0.2607	0.17	0.38	0.22	0.02	0.2001	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.501065	NA	NA	0.14814	0.034952	NA	0.13	NA	10.1474266
637	8	145001588	145001588	C	T	exonic	PLEC	NA	nonsynonymous SNV	PLEC:NM_201378:exon27:c.G3704A:p.R1235Q,PLEC:NM_201379:exon27:c.G3680A:p.R1227Q,PLEC:NM_201380:exon27:c.G4157A:p.R1386Q,PLEC:NM_201381:exon27:c.G3650A:p.R1217Q,PLEC:NM_201382:exon27:c.G3746A:p.R1249Q,PLEC:NM_201383:exon27:c.G3758A:p.R1253Q,PLEC:NM_201384:exon27:c.G3746A:p.R1249Q,PLEC:NM_000445:exon28:c.G3827A:p.R1276Q	exonic	ENSG00000178209	NA	nonsynonymous SNV	ENSG00000178209:ENST00000322810:exon27:c.G4157A:p.R1386Q,ENSG00000178209:ENST00000345136:exon27:c.G3746A:p.R1249Q,ENSG00000178209:ENST00000354589:exon27:c.G3746A:p.R1249Q,ENSG00000178209:ENST00000354958:exon27:c.G3680A:p.R1227Q,ENSG00000178209:ENST00000356346:exon27:c.G3704A:p.R1235Q,ENSG00000178209:ENST00000357649:exon27:c.G3758A:p.R1253Q,ENSG00000178209:ENST00000398774:exon27:c.G3650A:p.R1217Q,ENSG00000178209:ENST00000527096:exon27:c.G3815A:p.R1272Q,ENSG00000178209:ENST00000436759:exon28:c.G3827A:p.R1276Q	Score=507;Name=lod=154	NA	8q24.3	Score=959;Name=V$AP4_Q5	NA	Name=4	NA	rs11136334	0.25	0.25	0.222	0.230831	0.4274	0.1429	0.2954	0.028	0.3476	0.42	0.16	0.3	0.03	0.3489	0.42	0.45	T	0.0	B	0.0	B	0.606	N	0.981	P	-0.69	N	1.38	T	-0.932	T	0.000	T	0.078	1.989	12.61	-0.662	-0.040	0.002	4.689	1.989397	1.989397	0.19	0.411304	0.095519	ID=COSM1489106,COSM454196,COSM454197;OCCURENCE=1(breast)	0.232	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000078861.3;CLNDSDB=.;CLNDSDBID=.	10.1457294
638	19	40030704	40030704	C	T	exonic	EID2	NA	nonsynonymous SNV	EID2:NM_153232:exon1:c.G16A:p.A6T	exonic	ENSG00000176396	NA	nonsynonymous SNV	ENSG00000176396:ENST00000390658:exon1:c.G16A:p.A6T	NA	NA	19q13.2	Score=741;Name=V$SEF1_C	Name=GABP,E2F4,POU2F2,TAF1,E2F6,YY1_(C-20),Pol2(phosphoS2),Pol2,Oct-2,GTF2F1_(RAP-74),Pol2-4H8,HA-E2F1,YY1,PAX5-N19,HEY1,TBP	NA	NA	rs7252027	0.2	0.2	0.182	0.198682	0.2396	0.244	0.1686	0.0666	0.3098	0.26	0.26	0.22	0.04	0.2465	0.26	0.19	T	0.938	P	0.363	B	0.481	U	0.998	P	1.39	L	-2.25	D	-1.097	T	0.000	T	0.037	3.503	17.9	0.166	0.140	0.100	3.575	3.503009	3.503009	0.09	0.203822	0.086856	NA	0.094	NA	10.1434114
638	13	100518580	100518580	A	G	exonic	CLYBL	NA	nonsynonymous SNV	CLYBL:NM_206808:exon6:c.A721G:p.I241V	exonic	ENSG00000125246	NA	nonsynonymous SNV	ENSG00000125246:ENST00000419700:exon1:c.A10G:p.I4V,ENSG00000125246:ENST00000376354:exon5:c.A619G:p.I207V,ENSG00000125246:ENST00000376355:exon5:c.A619G:p.I207V,ENSG00000125246:ENST00000444838:exon5:c.A619G:p.I207V,ENSG00000125246:ENST00000339105:exon6:c.A721G:p.I241V,ENSG00000125246:ENST00000376360:exon6:c.A721G:p.I241V	Score=473;Name=lod=112	NA	13q32.3	Score=840;Name=V$CDPCR1_01	NA	NA	NA	rs3783185	0.81	0.81	0.814	0.82508	0.7356	0.877	0.7536	0.9047	0.8067	0.72	0.89	0.77	0.87	0.7473	0.89	0.16	T	0.102	B	0.437	B	0.000	N	0.000	P	1.91	M	1.37	T	-1.045	T	0.000	T	0.122	2.773	15.23	3.17	0.479	4.849	10.038	2.772797	2.772797	0.09	0.707093	0.87222	ID=COSM1179725;OCCURENCE=1(prostate)	0.877	NA	10.1433404
638	7	1478610	1478610	C	T	exonic	MICALL2	NA	nonsynonymous SNV	MICALL2:NM_182924:exon10:c.G1988A:p.R663H	exonic	ENSG00000164877	NA	nonsynonymous SNV	ENSG00000164877:ENST00000405088:exon6:c.G1352A:p.R451H,ENSG00000164877:ENST00000413446:exon9:c.G1858A:p.A620T,ENSG00000164877:ENST00000297508:exon10:c.G1988A:p.R663H	NA	NA	7p22.3	NA	NA	NA	NA	rs4580937	0.11	0.11	0.086	0.0990415	0.0507	0.0278	0.2176	0.1868	0.0194	0.06	0.04	0.2	0.18	0.0853	0.2	0.62	T	0.015	B	0.001	B	0.068	N	1.000	P	0	N	2.4	T	-1.089	T	0.000	T	0.128	1.158	9.715	-6.93	-2.572	-5.739	7.249	1.158115	NA	0.06	0.054429	0.171448	NA	0.152	NA	10.1429044
638	19	17025292	17025292	G	A	exonic	CPAMD8	NA	nonsynonymous SNV	CPAMD8:NM_015692:exon29:c.C3944T:p.T1315I	exonic	ENSG00000160111	NA	nonsynonymous SNV	ENSG00000160111:ENST00000443236:exon29:c.C3944T:p.T1315I	Score=461;Name=lod=100	NA	19p13.11	NA	NA	NA	NA	rs706761	0.65	0.65	0.665	0.643371	0.5835	0.7073	0.4597	0.8419	0.501	0.59	0.7	0.47	0.83	0.5629	0.83	0.18	T	0.572	P	0.285	B	0.000	U	0.000	P	1.915	M	.	.	-1.030	T	0.000	T	0.109	1.085	9.429	1.8	1.202	4.636	7.718	1.085015	NA	0.15	0.545476	0.805182	NA	0.565	NA	10.1414574
638	10	99439541	99439541	G	C	exonic	AVPI1	NA	nonsynonymous SNV	AVPI1:NM_021732:exon2:c.C122G:p.A41G	exonic	ENSG00000119986	NA	nonsynonymous SNV	ENSG00000119986:ENST00000370626:exon2:c.C122G:p.A41G	Score=458;Name=lod=97	NA	10q24.2	NA	NA	NA	NA	rs2275047	0.47	0.47	0.467	0.508187	0.3579	0.4742	0.438	0.6982	0.4908	0.35	0.46	0.41	0.69	0.4389	0.69	0.25	T	0.0	B	0.0	B	.	.	1.000	P	-1.1	N	1.59	T	-1.015	T	0.000	T	0.014	0.081	4.439	5.09	1.383	1.539	13.397	0.081327	NA	0	0.396279	0.645937	ID=COSM428249;OCCURENCE=2(breast)	0.543	NA	10.1402544
638	16	24918048	24918048	C	T	exonic	SLC5A11	NA	nonsynonymous SNV	SLC5A11:NM_001258414:exon10:c.C679T:p.R227C	exonic	ENSG00000158865	NA	nonsynonymous SNV	ENSG00000158865:ENST00000569071:exon9:c.C679T:p.R227C,ENSG00000158865:ENST00000449109:exon10:c.C679T:p.R227C	Score=371;Name=lod=43	NA	16p12.1	NA	NA	NA	NA	rs17772929	0.26	0.26	0.26	0.237021	0.4254	0.0169	0.2565	0.3026	0.1677	0.44	0.02	0.28	0.26	0.3384	0.44	0	D	0.007	B	0.001	B	.	.	0.000	P	.	.	-1.79	D	-0.979	T	0.000	T	.	2.903	15.67	-2.83	-0.302	-0.908	11.609	2.903209	2.903209	0.08	0.430465	0.335002	ID=COSM1162532;OCCURENCE=1(pancreas)	0.254	NA	10.1390684
638	12	133295353	133295353	C	T	exonic	PGAM5	NA	nonsynonymous SNV	PGAM5:NM_138575:exon6:c.C725T:p.P242L	exonic	ENSG00000247077	NA	nonsynonymous SNV	ENSG00000247077:ENST00000317555:exon6:c.C725T:p.P242L	NA	NA	12q24.33	NA	Name=Pol2(phosphoS2),Pol2	NA	NA	rs12423651	0.19	0.19	0.143	0.14996	0.0527	0.505	0.1873	0.0038	0.0552	0.06	0.52	0.2	0.01	0.1087	0.52	0	D	1.0	D	1.0	D	0.000	N	1.000	P	.	.	.	.	-0.918	T	0.000	T	0.023	1.054	9.305	-1.0	-0.434	-0.495	.	1.0541	NA	0	0.032907	0.012937	NA	0.058	NA	10.1390264
638	15	42643538	42643538	A	G	exonic	GANC	NA	nonsynonymous SNV	GANC:NM_198141:exon23:c.A2543G:p.Q848R	exonic	ENSG00000214013	NA	nonsynonymous SNV	ENSG00000214013:ENST00000566690:exon5:c.A170G:p.Q57R,ENSG00000214013:ENST00000567596:exon5:c.A170G:p.Q57R,ENSG00000214013:ENST00000318010:exon23:c.A2543G:p.Q848R	NA	NA	15q15.1	NA	NA	NA	NA	rs7180279	0.11	0.11	0.099	0.148562	0.0477	0.0972	0.2925	0.2035	0.1288	0.04	0.06	0.23	0.21	0.0917	0.23	0.3	T	0.002	B	0.002	B	0.833	N	1.000	P	-0.345	N	-2.1	D	-1.081	T	0.000	T	0.163	1.755	11.83	2.85	2.051	0.861	5.219	1.755487	1.755487	0.17	0.056525	0.177258	NA	0.152	NA	10.1374084
639	10	27459746	27459746	C	G	exonic	MASTL	NA	nonsynonymous SNV	MASTL:NM_001172303:exon8:c.C1858G:p.P620A,MASTL:NM_001172304:exon8:c.C1858G:p.P620A,MASTL:NM_032844:exon8:c.C1858G:p.P620A	exonic	ENSG00000120539	NA	nonsynonymous SNV	ENSG00000120539:ENST00000342386:exon8:c.C1858G:p.P620A,ENSG00000120539:ENST00000375940:exon8:c.C1858G:p.P620A,ENSG00000120539:ENST00000375946:exon8:c.C1858G:p.P620A	NA	NA	10p12.1	NA	Name=NRSF	NA	NA	rs3802526	0.1	0.1	0.09	0.110423	0.0646	0.1528	0.0432	0.0825	0.1994	0.06	0.2	0.05	0.06	0.0842	0.2	0.48	T	0.287	B	0.124	B	0.051	N	1.000	P	1.87	L	2.03	T	-1.013	T	0.000	T	0.086	0.167	4.898	4.32	2.617	0.314	14.799	0.166844	NA	0.11	0.052209	0.081934	NA	0.08	NA	10.1323244
639	19	55693244	55693244	T	C	exonic	PTPRH	NA	nonsynonymous SNV	PTPRH:NM_001161440:exon18:c.A2692G:p.I898V,PTPRH:NM_002842:exon20:c.A3226G:p.I1076V	exonic	ENSG00000080031	NA	nonsynonymous SNV	ENSG00000080031:ENST00000263434:exon18:c.A2692G:p.I898V,ENSG00000080031:ENST00000376350:exon20:c.A3226G:p.I1076V	Score=503;Name=lod=148	NA	19q13.42	Score=774;Name=V$PAX6_01	NA	NA	NA	rs2288419	0.34	0.34	0.345	0.401358	0.1928	0.4425	0.4193	0.472	0.4652	0.18	0.45	0.33	0.47	0.3099	0.48	1	T	0.775	P	0.426	B	0.001	N	0.001	P	0.95	L	2.9	T	-1.024	T	0.000	T	0.033	0.401	6.18	2.25	0.291	-0.083	6.251	0.401308	NA	0.3	0.202442	0.433954	NA	0.377	NA	10.1281914
639	19	49954803	49954803	C	T	exonic	PIH1D1	NA	nonsynonymous SNV	PIH1D1:NM_017916:exon1:c.G29A:p.G10E	exonic	ENSG00000104872	NA	nonsynonymous SNV	ENSG00000104872:ENST00000262265:exon1:c.G29A:p.G10E,ENSG00000104872:ENST00000596049:exon2:c.G29A:p.G10E,ENSG00000104872:ENST00000599366:exon2:c.G29A:p.G10E,ENSG00000104872:ENST00000601825:exon2:c.G29A:p.G10E	NA	NA	19q13.33	NA	Name=Pol2,NFKB	Name=15	NA	rs2293013	0.61	0.61	0.579	0.608826	0.7535	0.4117	0.6124	0.6475	0.6084	0.74	0.39	0.63	0.64	0.6862	0.77	1	T	0.0	B	0.0	B	0.225	N	1.000	P	-0.695	N	2.94	T	-0.997	T	0.000	T	0.108	-1.475	0.018	3.85	0.976	1.388	7.647	-1.474623	NA	1	0.765814	0.61734	NA	0.652	NA	10.1278194
639	5	141019110	141019110	C	A	exonic	RELL2	NA	nonsynonymous SNV	RELL2:NM_173828:exon4:c.C397A:p.L133I,RELL2:NM_001130029:exon5:c.C397A:p.L133I	exonic	ENSG00000164620	NA	nonsynonymous SNV	ENSG00000164620:ENST00000297164:exon4:c.C397A:p.L133I,ENSG00000164620:ENST00000518856:exon4:c.C199A:p.L67I,ENSG00000164620:ENST00000521367:exon4:c.C199A:p.L67I,ENSG00000164620:ENST00000444782:exon5:c.C397A:p.L133I	Score=605;Name=lod=383	NA	5q31.3	NA	NA	NA	NA	rs14251	0.37	0.37	0.381	0.397564	0.3807	0.1637	0.379	0.5772	0.4264	0.38	0.16	0.4	0.6	0.4086	0.6	1	T	0.0	B	0.0	B	0.000	N	0.000	P	-1.5	N	1.52	T	-0.930	T	0.000	T	0.129	0.355	5.924	5.7	0.990	3.514	12.860	0.354549	NA	1	0.417791	0.514072	NA	0.399	NA	10.1262424
639	1	248085124	248085124	G	A	exonic	OR2T8	NA	nonsynonymous SNV	OR2T8:NM_001005522:exon1:c.G805A:p.D269N	exonic	ENSG00000177462	NA	nonsynonymous SNV	ENSG00000177462:ENST00000319968:exon1:c.G805A:p.D269N	NA	NA	1q44	NA	NA	NA	NA	rs4590708	0.31	0.31	0.28	0.350439	0.1998	0.5387	0.2709	0.2769	0.4673	0.2	0.54	0.26	0.26	0.2865	0.54	0.02	D	0.734	P	0.415	B	0.004	U	1.000	P	1.895	L	8.53	T	-1.341	T	0.000	T	0.109	1.92	12.38	3.56	1.816	0.194	8.914	1.919763	1.919763	0	0.2208	0.252383	NA	0.203	NA	10.1262334
639	13	39424253	39424253	C	G	exonic	FREM2	NA	nonsynonymous SNV	FREM2:NM_207361:exon9:c.C6458G:p.T2153S	exonic	ENSG00000150893	NA	nonsynonymous SNV	ENSG00000150893:ENST00000280481:exon9:c.C6458G:p.T2153S	Score=426;Name=lod=72	NA	13q13.3	NA	NA	NA	NA	rs9548506	0.06	0.06	0	0.091853	0.0885	0.001	0.2478	0.0802	0.0941	0.05	0.0017	0.17	0.05	0.1172	0.17	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-1.07	N	1.55	T	-0.975	T	0.000	T	0.081	-1.069	0.174	3.13	0.100	3.496	8.984	-1.069032	NA	1	0.002558	0.001816	NA	NA	NA	10.1250754
639	19	41944237	41944237	T	C	exonic	ATP5SL	NA	nonsynonymous SNV	ATP5SL:NM_001167867:exon2:c.A119G:p.N40S,ATP5SL:NM_001167868:exon2:c.A119G:p.N40S,ATP5SL:NM_001167869:exon2:c.A101G:p.N34S,ATP5SL:NM_001167870:exon2:c.A101G:p.N34S,ATP5SL:NM_001167871:exon2:c.A101G:p.N34S,ATP5SL:NM_018035:exon2:c.A101G:p.N34S	exonic	ENSG00000105341	NA	nonsynonymous SNV	ENSG00000105341:ENST00000221943:exon2:c.A101G:p.N34S,ENSG00000105341:ENST00000301183:exon2:c.A119G:p.N40S,ENSG00000105341:ENST00000417807:exon2:c.A119G:p.N40S,ENSG00000105341:ENST00000438807:exon2:c.A101G:p.N34S,ENSG00000105341:ENST00000586786:exon2:c.A62G:p.N21S,ENSG00000105341:ENST00000589102:exon2:c.A101G:p.N34S,ENSG00000105341:ENST00000589970:exon2:c.A101G:p.N34S,ENSG00000105341:ENST00000590641:exon2:c.A119G:p.N40S,ENSG00000105341:ENST00000592922:exon2:c.A101G:p.N34S,ENSG00000105341:ENST00000595425:exon2:c.A101G:p.N34S,ENSG00000105341:ENST00000597457:exon2:c.A101G:p.N34S	NA	NA	19q13.2	NA	Name=CTCFL_(SC-98982)	NA	NA	rs2231940	0.4	0.4	0.366	0.385383	0.4066	0.5635	0.5144	0.1604	0.3926	0.42	0.54	0.43	0.17	0.4053	0.54	0.82	T	0.018	B	0.016	B	0.301	N	1.000	P	-0.09	N	3.12	T	-0.960	T	0.000	T	0.002	-0.77	0.758	-6.19	-1.890	-6.233	8.229	-0.770415	NA	0.2	0.396395	0.215388	ID=COSM148638;OCCURENCE=1(stomach)	0.341	NA	10.1250384
639	1	150737220	150737220	A	G	exonic	CTSS	NA	nonsynonymous SNV	CTSS:NM_001199739:exon2:c.T20C:p.V7A,CTSS:NM_004079:exon2:c.T20C:p.V7A	exonic	ENSG00000163131	NA	nonsynonymous SNV	ENSG00000163131:ENST00000368985:exon2:c.T20C:p.V7A,ENSG00000163131:ENST00000448301:exon2:c.T20C:p.V7A	NA	NA	1q21.3	Score=831;Name=V$GR_Q6	Name=p300_(N-15),c-Fos,RPC155	Name=125	NA	rs41271951	0.04	0.04	0.028	0.0217652	0.0765	NA	0.0331	0.0008	0.0082	0.09	NA	0.04	0.002	0.0503	0.09	0.37	T	0.0	B	0.0	B	0.008	N	1.000	N	-0.345	N	-1.13	T	-0.979	T	0.109	T	0.036	1.581	11.24	-1.64	-0.377	-0.018	6.373	1.580863	1.580863	0.13	0.081512	0.01498	NA	NA	NA	10.1250214
640	22	32756407	32756407	A	G	exonic	RFPL3	NA	nonsynonymous SNV	RFPL3:NM_001098535:exon2:c.A542G:p.Y181C,RFPL3:NM_006604:exon3:c.A455G:p.Y152C	exonic	ENSG00000128276	NA	nonsynonymous SNV	ENSG00000128276:ENST00000249007:exon2:c.A542G:p.Y181C,ENSG00000128276:ENST00000382088:exon2:c.A455G:p.Y152C,ENSG00000128276:ENST00000397468:exon3:c.A455G:p.Y152C	Score=385;Name=lod=49	NA	22q12.3	NA	NA	NA	NA	rs5749408	0.18	0.18	0.136	0.169928	0.0467	0.4583	0.1124	0.1059	0.1268	0.04	0.44	0.13	0.11	0.1087	0.44	0.06	T	0.411	B	0.093	B	.	.	0.000	P	2.545	M	-0.89	T	-1.021	T	0.000	T	0.243	0.87	8.527	0.704	0.528	1.786	5.601	0.870091	NA	0	0.055724	0.113255	ID=COSM149282,COSM149283;OCCURENCE=1(stomach)	0.116	NA	10.1222094
640	8	2021421	2021421	G	T	exonic	MYOM2	NA	nonsynonymous SNV	MYOM2:NM_003970:exon10:c.G961T:p.V321L	exonic	ENSG00000036448	NA	nonsynonymous SNV	ENSG00000036448:ENST00000262113:exon10:c.G961T:p.V321L	Score=358;Name=lod=38	NA	8p23.3	NA	NA	NA	NA	rs2272720	0.31	0.31	0.28	0.279952	0.4046	0.3601	0.379	0.0257	0.3425	0.41	0.36	0.41	0.03	0.3778	0.43	0.43	T	0.005	B	0.017	B	0.012	N	0.000	P	1.345	L	-0.23	T	-0.985	T	0.000	T	0.152	0.904	8.677	4.63	2.093	5.607	17.493	0.904279	NA	0.36	0.429186	0.095098	NA	0.355	NA	10.1217474
640	15	91354521	91354521	G	A	exonic	BLM	NA	nonsynonymous SNV	BLM:NM_000057:exon21:c.G3961A:p.V1321I	exonic	ENSG00000197299	NA	nonsynonymous SNV	ENSG00000197299:ENST00000560509:exon19:c.G3568A:p.V1190I,ENSG00000197299:ENST00000355112:exon21:c.G3961A:p.V1321I	NA	NA	15q26.1	NA	NA	NA	NA	rs7167216	0.07	0.07	0.064	0.0670927	0.0795	0.0238	0.0461	0.0953	0.0757	0.08	0.03	0.06	0.11	0.0663	0.11	0.24	T	0.01	B	0.003	B	0.670	N	1.000	P	0.455	N	0.89	T	-1.097	T	0.002	T	0.046	2.764	15.2	-4.78	-1.050	-0.668	17.092	2.7636	2.7636	0.66	0.066426	0.092812	NA	0.043	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116501.3;CLNDSDB=.;CLNDSDBID=.	10.1211074
640	6	56482801	56482801	C	G	exonic	DST	NA	nonsynonymous SNV	DST:NM_001723:exon23:c.G6031C:p.V2011L	exonic	ENSG00000151914	NA	nonsynonymous SNV	ENSG00000151914:ENST00000370765:exon23:c.G6031C:p.V2011L	Score=409;Name=lod=61	NA	6p12.1	NA	NA	NA	NA	rs6459166	0.4	0.4	0.403	0.401757	0.3976	0.2669	0.4063	0.5817	0.2986	0.38	0.25	0.43	0.59	0.3887	0.59	0.49	T	0.0	B	0.0	B	.	.	1.000	P	.	.	2.63	T	-0.975	T	0.010	T	0.033	-0.571	1.427	5.49	1.332	1.942	12.807	-0.571209	NA	0.48	0.427791	0.550159	NA	0.449	NA	10.1192424
640	5	149755744	149755744	G	C	exonic	TCOF1	NA	nonsynonymous SNV	TCOF1:NM_000356:exon12:c.G1762C:p.A588P,TCOF1:NM_001135245:exon12:c.G1762C:p.A588P,TCOF1:NM_001008657:exon13:c.G1993C:p.A665P,TCOF1:NM_001135243:exon13:c.G1993C:p.A665P,TCOF1:NM_001135244:exon13:c.G1993C:p.A665P,TCOF1:NM_001195141:exon13:c.G1993C:p.A665P	exonic	ENSG00000070814	NA	nonsynonymous SNV	ENSG00000070814:ENST00000323668:exon12:c.G1762C:p.A588P,ENSG00000070814:ENST00000445265:exon12:c.G1762C:p.A588P,ENSG00000070814:ENST00000377797:exon13:c.G1993C:p.A665P,ENSG00000070814:ENST00000394269:exon13:c.G1993C:p.A665P,ENSG00000070814:ENST00000427724:exon13:c.G1993C:p.A665P,ENSG00000070814:ENST00000439160:exon13:c.G1993C:p.A665P,ENSG00000070814:ENST00000451292:exon13:c.G1993C:p.A665P,ENSG00000070814:ENST00000504761:exon13:c.G1993C:p.A665P,ENSG00000070814:ENST00000513346:exon13:c.G1993C:p.A665P	NA	NA	5q32	NA	NA	NA	NA	rs2071240	0.05	0.05	0.04	0.0605032	0.0646	0.122	0.0274	0.0045	0.092	0.06	0.08	0.03	0.01	0.0693	0.081	0.43	T	1.0	D	0.999	D	0.140	N	1.000	P	1.445	L	-0.52	T	-0.797	T	0.033	T	0.273	2.779	15.25	1.85	0.125	0.180	3.913	2.778545	2.778545	0.09	0.080484	0.013845	NA	0.043	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118607.2;CLNDSDB=.;CLNDSDBID=.	10.1189494
640	7	21640361	21640361	T	C	exonic	DNAH11	NA	nonsynonymous SNV	DNAH11:NM_001277115:exon16:c.T3068C:p.V1023A	exonic	ENSG00000105877	NA	nonsynonymous SNV	ENSG00000105877:ENST00000328843:exon16:c.T3068C:p.V1023A,ENSG00000105877:ENST00000409508:exon16:c.T3068C:p.V1023A	Score=278;Name=lod=18	NA	7p15.3	NA	NA	NA	NA	rs10269582	0.24	0.24	0.216	0.220447	0.4274	0.0198	0.3112	0.149	0.2464	0.44	0.02	0.33	0.13	0.3529	0.44	0.93	T	0.029	B	0.012	B	0.001	N	0.085	P	.	.	1.97	T	-0.962	T	0.000	T	0.168	-1.709	0.011	4.49	2.161	2.368	10.789	-1.708807	NA	0.84	0.434418	0.177705	NA	0.246	NA	10.1186154
640	15	58838010	58838010	A	G	exonic	LIPC	NA	nonsynonymous SNV	LIPC:NM_000236:exon5:c.A644G:p.N215S	exonic	ENSG00000166035	NA	nonsynonymous SNV	ENSG00000166035:ENST00000433326:exon4:c.A461G:p.N154S,ENSG00000166035:ENST00000299022:exon5:c.A644G:p.N215S,ENSG00000166035:ENST00000414170:exon6:c.A644G:p.N215S,ENSG00000166035:ENST00000356113:exon7:c.A644G:p.N215S	NA	NA	15q21.3	Score=791;Name=V$CART1_01	NA	NA	NA	rs6083	0.59	0.59	0.583	0.608626	0.3847	0.7917	0.4928	0.7141	0.59	0.38	0.85	0.48	0.69	0.4703	0.85	0.04	D	0.028	B	0.014	B	0.109	N	1.000	P	1.495	L	-2.61	D	-0.994	T	0.000	T	0.013	1.396	10.6	-0.071	0.025	2.059	2.841	1.39631	1.39631	0.06	0.363117	0.678376	NA	0.486	NA	10.1152164
640	8	37728017	37728017	A	G	exonic	RAB11FIP1	NA	nonsynonymous SNV	RAB11FIP1:NM_025151:exon4:c.T1652C:p.M551T,RAB11FIP1:NM_001002814:exon5:c.T3554C:p.M1185T	exonic	ENSG00000156675	NA	nonsynonymous SNV	ENSG00000156675:ENST00000524118:exon3:c.T1208C:p.M403T,ENSG00000156675:ENST00000287263:exon4:c.T1652C:p.M551T,ENSG00000156675:ENST00000522727:exon4:c.T1208C:p.M403T,ENSG00000156675:ENST00000330843:exon5:c.T3554C:p.M1185T	Score=486;Name=lod=126	NA	8p11.23	NA	Name=GR,c-Jun	NA	NA	rs7817179	0.83	0.83	0.823	0.809505	0.7416	0.9752	0.781	0.8366	0.6922	0.76	0.98	0.75	0.85	0.7573	0.98	1	T	0.0	B	0.0	B	0.001	N	1.000	P	-1.61	N	2.43	T	-0.954	T	0.000	T	0.088	-0.976	0.298	5.42	1.295	1.543	10.847	-0.975855	NA	1	0.719302	0.79369	NA	0.014	NA	10.1151314
641	10	72520254	72520254	C	T	exonic	ADAMTS14	NA	nonsynonymous SNV	ADAMTS14:NM_080722:exon22:c.C3317T:p.P1106L,ADAMTS14:NM_139155:exon22:c.C3326T:p.P1109L	exonic	ENSG00000138316	NA	nonsynonymous SNV	ENSG00000138316:ENST00000373207:exon22:c.C3317T:p.P1106L,ENSG00000138316:ENST00000373208:exon22:c.C3326T:p.P1109L	NA	NA	10q22.1	NA	NA	NA	NA	rs61736607	0.04	0.04	0.025	0.0279553	0.0805	0.001	0.0461	0.0038	0.0215	0.07	NA	0.06	0.0041	0.0538	0.085	0.55	T	0.006	B	0.003	B	0.496	N	1.000	N	-0.46	N	0.1	T	-1.132	T	0.004	T	0.041	1.143	9.658	3.53	1.220	1.076	12.268	1.143274	NA	0.52	0.085233	0.014072	NA	0.022	NA	10.1138004
641	20	31590686	31590686	C	A	exonic	SUN5	NA	nonsynonymous SNV	SUN5:NM_080675:exon2:c.G117T:p.E39D	exonic	ENSG00000167098	NA	nonsynonymous SNV	ENSG00000167098:ENST00000356173:exon2:c.G117T:p.E39D,ENSG00000167098:ENST00000375519:exon2:c.G117T:p.E39D,ENSG00000167098:ENST00000375523:exon2:c.G117T:p.E39D,ENSG00000167098:ENST00000420875:exon2:c.G84T:p.E28D	NA	NA	20q11.21	NA	NA	NA	NA	rs1133358	0.18	0.18	0.175	0.191094	0.2535	0.0169	0.281	0.2315	0.1881	0.25	0.02	0.26	0.2	0.2236	0.26	0.03	D	0.533	P	0.237	B	0.076	N	1.000	P	1.995	M	2.27	T	-1.046	T	0.000	T	0.084	1.561	11.17	2.04	0.641	0.531	10.482	1.561289	1.561289	0	0.242558	0.238538	NA	0.268	NA	10.1136754
641	10	115391612	115391612	G	A	intronic	NRAP	NA	NA	NA	exonic	ENSG00000197893	NA	nonsynonymous SNV	ENSG00000197893:ENST00000369360:exon16:c.C1639T:p.H547Y,ENSG00000197893:ENST00000369358:exon17:c.C1744T:p.H582Y	Score=649;Name=lod=579	NA	10q25.3	NA	NA	Name=16	NA	rs17090786	0.01	0.01	0.006	0.0091853	0.0239	NA	0.0187	0.0008	0.0082	0.01	NA	0.02	0.0041	0.0131	0.02	.	.	.	.	.	.	0.034	N	1.000	D	.	.	2.56	T	-1.032	T	0.016	T	0.062	1.3	10.26	2.53	0.307	0.161	2.916	1.300209	1.300209	0.09	0.017209	0.002497	NA	NA	NA	10.1124577
641	14	54417522	54417522	A	G	exonic	BMP4	NA	nonsynonymous SNV	BMP4:NM_001202:exon4:c.T455C:p.V152A,BMP4:NM_130850:exon4:c.T455C:p.V152A,BMP4:NM_130851:exon4:c.T455C:p.V152A	exonic	ENSG00000125378	NA	stoploss	ENSG00000125378:ENST00000558961:exon2:c.T313C:p.X105R	Score=637;Name=lod=518	NA	14q22.2	NA	NA	NA	NA	rs17563	0.37	0.37	0.32	0.325679	0.5497	0.2857	0.3617	0.1831	0.3037	0.56	0.27	0.37	0.2	0.457	0.56	0.28	T	0.002	B	0.007	B	0.000	N	0.001	P	1.39	L	-0.08	T	-0.920	T	0.000	T	0.176	1.865	12.19	4.05	0.993	5.063	9.132	1.8645	1.8645	0.11	0.548256	0.258284	NA	0.384	NA	10.1117107
641	6	38650628	38650628	T	G	exonic	GLO1	NA	nonsynonymous SNV	GLO1:NM_006708:exon4:c.A332C:p.E111A	exonic	ENSG00000124767	NA	nonsynonymous SNV	ENSG00000124767:ENST00000373365:exon4:c.A332C:p.E111A	Score=512;Name=lod=160	NA	6p21.2	NA	NA	NA	NA	rs4746	0.3	0.3	0.269	0.28734	0.4185	0.1002	0.3818	0.3132	0.2434	0.42	0.09	0.37	0.33	0.3618	0.44	0.41	T	0.0	B	0.002	B	0.000	N	0.000	P	0.515	N	1.68	T	-1.049	T	0.017	T	0.107	1.659	11.51	3.5	0.518	4.247	14.942	1.659204	1.659204	0.2	0.44186	0.349296	NA	0.326	CLINSIG=unknown;CLNDBN=Autism_1;CLNREVSTAT=single;CLNACC=RCV000017412.1;CLNDSDB=MedGen;CLNDSDBID=C1968924	10.1111734
641	3	39323163	39323163	A	C	exonic	CX3CR1	NA	nonsynonymous SNV	CX3CR1:NM_001171174:exon1:c.T24G:p.F8L	exonic	ENSG00000168329	NA	nonsynonymous SNV	ENSG00000168329:ENST00000358309:exon1:c.T24G:p.F8L	NA	NA	3p22.2	NA	Name=PU.1	Name=4	NA	rs11715522	0.46	0.46	0.424	0.422923	0.4135	0.6895	0.487	0.1694	0.455	0.41	0.71	0.51	0.21	0.4235	0.71	1	T	.	.	.	.	.	.	1.000	P	.	.	-0.06	T	-0.957	T	0.000	T	0.037	1.188	9.831	-2.35	-0.414	-1.109	4.902	1.188448	NA	1	0.385678	0.198342	NA	0.478	NA	10.1106554
641	14	20444012	20444012	A	T	exonic	OR4K15	NA	nonsynonymous SNV	OR4K15:NM_001005486:exon1:c.A335T:p.E112V	exonic	ENSG00000169488	NA	nonsynonymous SNV	ENSG00000169488:ENST00000305051:exon1:c.A335T:p.E112V	NA	NA	14q11.2	NA	NA	NA	NA	rs3861512	0.18	0.18	0.162	0.218251	0.2227	0.123	0.1715	0.2141	0.3507	0.23	0.12	0.18	0.19	0.2368	0.27	0.02	D	0.608	P	0.273	B	0.072	N	1.000	P	2.16	M	4.76	T	-0.907	T	0.000	T	0.16	0.46	6.499	-0.288	-0.252	0.973	7.247	0.46028	NA	0.04	0.265534	0.240127	ID=COSM1368755;OCCURENCE=1(large_intestine)	0.196	NA	10.1082994
641	5	140801104	140801104	T	C	exonic	PCDHGA11	NA	nonsynonymous SNV	PCDHGA11:NM_018914:exon1:c.T310C:p.F104L,PCDHGA11:NM_032091:exon1:c.T310C:p.F104L,PCDHGA11:NM_032092:exon1:c.T310C:p.F104L	exonic	ENSG00000253873	NA	nonsynonymous SNV	ENSG00000253873:ENST00000398587:exon1:c.T310C:p.F104L,ENSG00000253873:ENST00000518882:exon1:c.T310C:p.F104L	NA	NA	5q31.3	NA	Name=ZNF263	NA	NA	rs11167744	0.1	0.1	0.077	0.113219	0.0596	0.1181	0.1499	0.1195	0.1288	0.07	0.12	0.13	0.11	0.095	0.13	1	T	0.0	B	0.0	B	0.714	N	1.000	P	-1.685	N	1.86	T	-0.989	T	0.000	T	0.095	-0.407	2.098	-3.06	-0.129	-3.692	0.919	-0.406756	NA	1	0.073239	0.113395	NA	0.08	NA	10.1054944
641	16	20802172	20802172	C	T	exonic	ERI2	NA	nonsynonymous SNV	ERI2:NM_080663:exon9:c.G815A:p.G272D	exonic	ENSG00000196678	NA	nonsynonymous SNV	ENSG00000196678:ENST00000300005:exon9:c.G815A:p.G272D	NA	NA	16p12.3	NA	NA	NA	NA	rs2301770	0.11	0.11	0.118	0.106629	0.0755	0.1329	0.0663	0.1263	0.1135	0.08	0.15	0.09	0.14	0.0825	0.15	.	.	0.999	D	0.982	D	.	.	1.000	P	.	.	.	.	-1.055	T	0.002	T	0.106	0.444	6.413	-0.5	-0.080	-1.022	5.237	0.444309	NA	0	0.070233	0.114721	NA	0.101	NA	10.1051004
642	19	41633980	41633980	C	T	exonic	CYP2F1	NA	nonsynonymous SNV	CYP2F1:NM_000774:exon10:c.C1469T:p.P490L	exonic	ENSG00000197446	NA	nonsynonymous SNV	ENSG00000197446:ENST00000331105:exon10:c.C1469T:p.P490L	NA	NA	19q13.2	NA	Name=Rad21,CTCF,RXRA,Pol2,c-Myc,NFKB,CTCF_(C-20),HA-E2F1,ZNF263	Name=109	NA	rs7246981	0.06	0.06	0.035	0.0557109	0.0875	0.001	0.2161	0.0015	0.0389	0.09	0.0017	0.15	0.002	0.0736	0.15	0.01	D	0.004	B	0.001	B	0.032	U	1.000	P	1.65	L	2.43	T	-1.044	T	0.000	T	0.06	1.332	10.37	-0.195	-0.211	-0.276	2.873	1.332271	1.332271	0.01	0.070614	0.013495	NA	0.007	NA	10.1016194
642	19	15996820	15996820	G	A	exonic	CYP4F2	NA	synonymous SNV	CYP4F2:NM_001082:exon9:c.C1029T:p.H343H	exonic	ENSG00000186115	NA	nonsynonymous SNV	ENSG00000186115:ENST00000011989:exon7:c.C515T:p.T172I	Score=510;Name=lod=158	NA	19p13.12	NA	Name=NRSF	NA	NA	rs2074900	0.25	0.25	0.239	0.233027	0.2972	0.2222	0.2421	0.1725	0.2536	0.31	0.24	0.22	0.22	0.2864	0.31	0	D	0.004	B	0.009	B	.	.	0.000	P	.	.	1.8	T	-0.978	T	0.000	T	.	1.085	9.429	1.49	0.379	2.531	5.187	1.085048	NA	0.37	0.314884	0.189741	NA	0.384	NA	10.101516
642	20	60968547	60968547	A	G	exonic	CABLES2	NA	nonsynonymous SNV	CABLES2:NM_031215:exon6:c.T829C:p.S277P	exonic	ENSG00000149679	NA	nonsynonymous SNV	ENSG00000149679:ENST00000279101:exon6:c.T829C:p.S277P	NA	NA	20q13.33	NA	NA	NA	NA	rs41284972	0.05	0.05	0.059	0.0858626	0.0815	0.0089	0.0447	0.0522	0.2444	0.09	0.01	0.05	0.06	0.0837	0.09	0.26	T	0.885	P	0.53	P	0.135	N	1.000	P	1.385	L	0.82	T	-1.069	T	0.005	T	0.283	0.97	8.957	2.44	0.176	1.250	2.950	0.969725	NA	0.24	0.067674	0.057876	NA	0.109	NA	10.1004594
642	6	150114745	150114745	G	A	exonic	PCMT1	NA	nonsynonymous SNV	PCMT1:NM_001252050:exon4:c.G427A:p.V143I,PCMT1:NM_001252051:exon4:c.G427A:p.V143I,PCMT1:NM_001252052:exon4:c.G427A:p.V143I,PCMT1:NM_001252049:exon5:c.G532A:p.V178I,PCMT1:NM_001252053:exon5:c.G532A:p.V178I,PCMT1:NM_005389:exon5:c.G532A:p.V178I	exonic	ENSG00000120265	NA	nonsynonymous SNV	ENSG00000120265:ENST00000544496:exon4:c.G253A:p.V85I,ENSG00000120265:ENST00000367378:exon5:c.G532A:p.V178I,ENSG00000120265:ENST00000367380:exon5:c.G358A:p.V120I,ENSG00000120265:ENST00000367384:exon5:c.G532A:p.V178I,ENSG00000120265:ENST00000464889:exon5:c.G532A:p.V178I,ENSG00000120265:ENST00000495487:exon5:c.G265A:p.V89I	Score=631;Name=lod=490	NA	6q25.1	Score=872;Name=V$BACH2_01	NA	NA	NA	rs4816	0.64	0.64	0.629	0.667332	0.3678	0.8343	0.6715	0.9009	0.4847	0.35	0.8	0.63	0.89	0.4918	0.89	0.39	T	0.0	B	0.001	B	0.000	N	1.000	P	-0.575	N	1.98	T	-1.025	T	0.017	T	0.078	1.576	11.22	4.61	0.453	2.084	10.463	1.575546	1.575546	1	0.373343	0.79596	NA	0.717	NA	10.1003904
642	5	79032666	79032666	C	T	exonic	CMYA5	NA	nonsynonymous SNV	CMYA5:NM_153610:exon2:c.C8078T:p.T2693I	exonic	ENSG00000164309	NA	nonsynonymous SNV	ENSG00000164309:ENST00000446378:exon2:c.C8078T:p.T2693I	NA	NA	5q14.1	NA	NA	NA	NA	rs28362541	0.21	0.21	0.245	0.181909	0.0596	0.3621	0.0476	0.2776	0.0879	0.06	0.41	0.04	0.33	0.1076	0.41	0.02	D	0.007	B	0.0	B	.	.	1.000	P	0	N	2.25	T	-0.906	T	0.000	T	0.02	-0.283	2.648	-3.19	-1.139	0.094	0.154	-0.282578	NA	0.65	0.065886	0.232806	NA	0.21	NA	10.1002474
642	5	140595343	140595343	G	C	exonic	PCDHB13	NA	nonsynonymous SNV	PCDHB13:NM_018933:exon1:c.G1648C:p.V550L	exonic	ENSG00000187372	NA	nonsynonymous SNV	ENSG00000187372:ENST00000341948:exon1:c.G1648C:p.V550L	NA	NA	5q31.3	NA	NA	NA	NA	rs56309578	0.06	0.06	0.028	0.0684904	0.0795	0.003	0.0663	0.1377	0.0327	0.06	0.0035	0.05	0.14	0.0684	0.14	1	T	0.0	B	0.003	B	.	.	1.000	N	0.24	N	4.66	T	-0.951	T	0.000	T	0.064	-1.352	0.028	-3.54	-1.078	-2.965	4.891	-1.351816	NA	0.56	0.085389	0.118529	NA	0.058	NA	10.1000444
642	1	152129087	152129087	T	C	exonic	RPTN	NA	nonsynonymous SNV	RPTN:NM_001122965:exon3:c.A488G:p.K163R	exonic	ENSG00000215853	NA	nonsynonymous SNV	ENSG00000215853:ENST00000316073:exon3:c.A488G:p.K163R	NA	NA	1q21.3	NA	NA	NA	NA	rs78544048	0.23	0.23	0.17	0.27476	0.1779	0.2996	0.4741	0.2216	0.2791	0.17	0.27	0.35	0.18	0.0002	0.35	0.69	T	0.0	B	0.001	B	0.585	N	1.000	P	-2.175	N	2.63	T	-0.962	T	0.002	T	0.004	-0.794	0.693	-4.06	-1.459	-1.098	5.483	-0.793571	NA	1	0.056411	0.070562	NA	0.167	NA	10.0988224
642	3	191093310	191093310	A	G	exonic	CCDC50	NA	nonsynonymous SNV	CCDC50:NM_178335:exon6:c.A908G:p.K303R	exonic	ENSG00000152492	NA	nonsynonymous SNV	ENSG00000152492:ENST00000392456:exon6:c.A908G:p.K303R	Score=475;Name=lod=114	NA	3q28	NA	NA	NA	NA	rs4677728	0.5	0.5	0.51	0.502196	0.4105	0.4702	0.4697	0.7247	0.3517	0.42	0.44	0.46	0.72	0.4294	0.72	1	T	0.11	B	0.025	B	0.125	N	0.000	P	.	.	1.56	T	-0.950	T	0.000	T	0.039	0.545	6.952	2.32	0.168	1.352	7.377	0.545436	NA	0.85	0.395116	0.670527	NA	0.464	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000041449.1;CLNDSDB=.;CLNDSDBID=.	10.0983174
642	12	122392038	122392038	C	T	exonic	WDR66	NA	nonsynonymous SNV	WDR66:NM_001178003:exon10:c.C1333T:p.L445F,WDR66:NM_144668:exon10:c.C1333T:p.L445F	exonic	ENSG00000158023	NA	nonsynonymous SNV	ENSG00000158023:ENST00000288912:exon10:c.C1333T:p.L445F,ENSG00000158023:ENST00000397454:exon10:c.C1333T:p.L445F	Score=428;Name=lod=73	NA	12q24.31	NA	NA	NA	NA	rs11043265	0.24	0.24	0.255	0.310503	0.0527	0.2937	0.0749	0.6309	0.3272	0.06	0.26	0.09	0.62	0.1371	0.62	0.65	T	0.424	B	0.223	B	0.703	N	0.999	P	1.59	L	0.61	T	-0.955	T	0.000	T	0.071	1.624	11.39	3.52	1.295	0.184	9.323	1.624335	1.624335	0.05	0.045355	0.526709	NA	0.246	NA	10.0981784
642	3	14755617	14755617	C	G	exonic	C3orf20	NA	nonsynonymous SNV	C3orf20:NM_001184957:exon8:c.C898G:p.L300V,C3orf20:NM_001184958:exon8:c.C898G:p.L300V,C3orf20:NM_032137:exon8:c.C1264G:p.L422V	exonic	ENSG00000131379	NA	nonsynonymous SNV	ENSG00000131379:ENST00000253697:exon8:c.C1264G:p.L422V,ENSG00000131379:ENST00000412910:exon8:c.C898G:p.L300V,ENSG00000131379:ENST00000435614:exon8:c.C898G:p.L300V	Score=414;Name=lod=64	NA	3p25.1	Score=705;Name=V$HOX13_01	NA	NA	NA	rs6790129	0.41	0.41	0.416	0.378994	0.4175	0.3234	0.4568	0.4244	0.2802	0.42	0.33	0.44	0.47	0.3927	0.47	0.28	T	0.873	P	0.49	P	0.001	N	0.922	P	1.905	M	2.55	T	-0.928	T	0.000	T	0.139	2.702	14.99	1.57	0.306	-0.090	2.053	2.701572	2.701572	0.3	0.425581	0.431003	NA	0.449	NA	10.0975524
642	19	41939297	41939297	C	G	exonic	ATP5SL	NA	nonsynonymous SNV	ATP5SL:NM_001167871:exon4:c.G395C:p.C132S,ATP5SL:NM_001167867:exon5:c.G494C:p.C165S,ATP5SL:NM_018035:exon5:c.G476C:p.C159S	exonic	ENSG00000105341	NA	nonsynonymous SNV	ENSG00000105341:ENST00000590641:exon4:c.G413C:p.C138S,ENSG00000105341:ENST00000592922:exon4:c.G395C:p.C132S,ENSG00000105341:ENST00000595425:exon4:c.G395C:p.C132S,ENSG00000105341:ENST00000221943:exon5:c.G476C:p.C159S,ENSG00000105341:ENST00000417807:exon5:c.G494C:p.C165S,ENSG00000105341:ENST00000589102:exon5:c.G422C:p.C141S	Score=414;Name=lod=64	NA	19q13.2	NA	Name=Pol2	NA	NA	rs1043413	0.5	0.5	0.525	0.506789	0.4095	0.5694	0.5504	0.5938	0.3937	0.42	0.54	0.48	0.6	0.4368	0.6	0.32	T	0.001	B	0.001	B	0.000	N	0.000	P	-0.505	N	1.64	T	-0.960	T	0.000	T	0.033	0.873	8.539	3.39	0.617	2.613	7.807	0.872772	NA	0.47	0.391395	0.558103	NA	0.457	NA	10.0956384
643	2	228131169	228131169	A	G	exonic	COL4A3	NA	nonsynonymous SNV	COL4A3:NM_000091:exon22:c.A1352G:p.H451R	exonic	ENSG00000169031	NA	nonsynonymous SNV	ENSG00000169031:ENST00000396578:exon22:c.A1352G:p.H451R	NA	NA	2q36.3	NA	NA	NA	NA	rs11677877	0.1	0.1	0.079	0.111422	0.0686	0.1577	0.183	0.0666	0.1176	0.06	0.15	0.17	0.05	0.0944	0.17	0.86	T	0.145	B	0.1	B	0.417	N	1.000	P	-1.665	N	-4.07	D	-0.661	T	0.003	T	0.035	0.261	5.41	-4.09	-1.113	-0.285	4.196	0.260736	NA	0.5	0.076679	0.06654	NA	0.051	NA	10.0936544
643	6	32783086	32783086	A	G	exonic	HLA-DOB	NA	synonymous SNV	HLA-DOB:NM_002120:exon2:c.T96C:p.D32D	exonic	ENSG00000241106	NA	synonymous SNV	ENSG00000241106:ENST00000438763:exon2:c.T96C:p.D32D	Score=500;Name=lod=144	NA	6p21.32	NA	NA	Name=46	NA	rs7383287	0.12	0.12	0.111	0.132388	0.1839	0.0308	0.1268	0.1831	0.1196	0.19	0.03	0.12	0.12	0.1776	0.21	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.949	T	0.122	T	.	1.339	10.4	4.28	1.907	0.298	11.651	1.339479	1.339479	NA	0.21186	0.182932	NA	0.167	NA	10.0933066
643	1	161088583	161088583	T	G	exonic	NIT1	NA	nonsynonymous SNV	NIT1:NM_001185092:exon2:c.T10G:p.F4V,NIT1:NM_005600:exon2:c.T10G:p.F4V	exonic	ENSG00000158793	NA	nonsynonymous SNV	ENSG00000158793:ENST00000368008:exon2:c.T10G:p.F4V,ENSG00000158793:ENST00000368009:exon2:c.T10G:p.F4V	Score=444;Name=lod=85	NA	1q23.3	Score=892;Name=V$ZID_01	NA	NA	NA	rs41270017	0.07	0.07	0.087	0.0928514	0.0736	0.0675	0.0663	0.1067	0.1391	0.07	0.06	0.06	0.1	0.0877	0.12	0.26	T	0.0	B	0.0	B	0.452	N	0.000	P	0.345	N	-0.94	T	-1.061	T	0.137	T	0.103	1.542	11.11	2.52	0.903	0.594	9.211	1.542148	1.542148	0.28	0.079186	0.115751	NA	0.051	NA	10.0928474
643	22	36123083	36123083	C	T	exonic	APOL5	NA	nonsynonymous SNV	APOL5:NM_030642:exon3:c.C968T:p.T323M	exonic	ENSG00000128313	NA	nonsynonymous SNV	ENSG00000128313:ENST00000249044:exon3:c.C968T:p.T323M	NA	NA	22q12.3	NA	NA	NA	NA	rs2076672	0.18	0.18	0.167	0.148562	0.2545	0.0804	0.2032	0.0923	0.1472	0.27	0.07	0.24	0.11	0.2261	0.27	0	D	0.998	D	0.837	P	0.358	U	1.000	P	1.59	L	3.7	T	-0.914	T	0.000	T	0.1	2.253	13.49	1.78	0.174	0.985	7.039	2.253235	2.253235	0	0.263256	0.118702	NA	0.145	NA	10.0894774
643	11	56756399	56756399	G	T	exonic	OR5AK2	NA	nonsynonymous SNV	OR5AK2:NM_001005323:exon1:c.G11T:p.G4V	exonic	ENSG00000181273	NA	nonsynonymous SNV	ENSG00000181273:ENST00000326855:exon1:c.G11T:p.G4V	NA	NA	11q12.1	NA	NA	NA	NA	rs10896563	0.14	0.14	0.129	0.136581	0.0746	0.3879	0.0778	0.025	0.1339	0.07	0.37	0.05	0.03	0.0997	0.37	0.17	T	0.262	B	0.194	B	0.525	N	1.000	P	1.145	L	7.08	T	-1.097	T	0.000	T	0.033	-0.073	3.646	-4.16	-1.062	-2.403	6.529	-0.072519	NA	0.08	0.070764	0.025443	NA	0.159	NA	10.0882694
643	4	79437155	79437155	C	T	exonic	FRAS1	NA	synonymous SNV	FRAS1:NM_025074:exon66:c.C10377T:p.T3459T	exonic	ENSG00000138759	NA	synonymous SNV	ENSG00000138759:ENST00000264895:exon66:c.C10377T:p.T3459T	Score=352;Name=lod=36	NA	4q21.21	Score=845;Name=V$ZID_01	NA	NA	NA	rs3749487	0.2	0.2	0.176	0.176518	0.2058	0.2242	0.1398	0.177	0.1227	0.2	0.22	0.16	0.2	0.191	0.22	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.985	T	0.000	T	.	-0.603	1.309	-4.61	-0.358	-1.645	2.796	-0.602724	NA	NA	0.181829	0.178121	ID=COSM1131029,COSM1131030;OCCURENCE=1(prostate)	0.246	NA	10.0880376
643	14	70924602	70924602	T	G	exonic	ADAM21	NA	nonsynonymous SNV	ADAM21:NM_003813:exon2:c.T386G:p.F129C	exonic	ENSG00000139985	NA	nonsynonymous SNV	ENSG00000139985:ENST00000267499:exon1:c.T386G:p.F129C,ENSG00000139985:ENST00000603540:exon2:c.T386G:p.F129C	NA	NA	14q24.2	NA	NA	NA	NA	rs72735759	NA	NA	0.046	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2459	0.011	0.11	T	0.407	B	0.258	B	0.261	U	1.000	N	1.865	L	5.29	T	-1.046	T	0.005	T	0.318	-1.273	0.044	-7.52	-2.633	-1.073	1.36	-1.273422	NA	0.12	NA	NA	NA	0.043	NA	10.0874334
643	11	120989335	120989335	A	G	exonic	TECTA	NA	nonsynonymous SNV	TECTA:NM_005422:exon6:c.A1111G:p.R371G	exonic	ENSG00000109927	NA	nonsynonymous SNV	ENSG00000109927:ENST00000264037:exon6:c.A1111G:p.R371G,ENSG00000109927:ENST00000392793:exon7:c.A1111G:p.R371G	Score=243;Name=lod=13	NA	11q23.3	NA	NA	NA	NA	rs612969	0.46	0.46	0.449	0.443291	0.4314	0.246	0.3818	0.7428	0.2975	0.44	0.3	0.41	0.72	0.403	0.72	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-1.815	N	0.36	T	-0.909	T	0.000	T	0.037	-0.024	3.893	3.86	0.364	4.856	11.718	-0.023615	NA	1	0.412305	0.663187	NA	0.529	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000038479.1;CLNDSDB=.;CLNDSDBID=.	10.0866284
643	9	125391241	125391241	G	A	exonic	OR1B1	NA	stopgain	OR1B1:NM_001004450:exon1:c.C574T:p.R192X	exonic	ENSG00000171484	NA	stopgain	ENSG00000171484:ENST00000304833:exon1:c.C574T:p.R192X	NA	NA	9q33.2	NA	NA	NA	NA	rs1476860	0.33	0.33	0.307	0.339257	0.2763	0.5972	0.4683	0.053	0.4335	0.28	0.57	0.41	0.08	0.3404	0.57	0.19	T	.	.	.	.	0.288	N	0.000	P	.	.	.	.	.	.	.	.	.	3.187	16.67	-6.05	-0.973	-1.276	7.867	3.187345	3.187345	0.53	0.296977	0.090331	NA	0.225	NA	10.086323
643	13	28009031	28009031	G	C	exonic	GTF3A	NA	nonsynonymous SNV	GTF3A:NM_002097:exon7:c.G733C:p.V245L	exonic	ENSG00000122034	NA	nonsynonymous SNV	ENSG00000122034:ENST00000381140:exon7:c.G733C:p.V245L	Score=251;Name=lod=14	NA	13q12.2	NA	NA	NA	NA	rs7323	0.2	0.2	0.162	0.173323	0.2505	0.0913	0.2363	0.2057	0.09	0.26	0.05	0.27	0.2	0.2233	0.27	0.18	T	0.854	P	0.22	B	0.007	N	0.062	P	1.09	L	3.01	T	-0.875	T	0.000	T	0.138	2.449	14.15	2.92	0.313	4.024	10.520	2.448947	2.448947	0.01	0.27359	0.205357	ID=COSM1366159;OCCURENCE=1(large_intestine)	0.181	NA	10.0859434
644	17	38936659	38936659	C	T	exonic	KRT27	NA	nonsynonymous SNV	KRT27:NM_181537:exon3:c.G577A:p.G193S	exonic	ENSG00000171446	NA	nonsynonymous SNV	ENSG00000171446:ENST00000301656:exon3:c.G577A:p.G193S	Score=355;Name=lod=37	NA	17q21.2	Score=921;Name=V$CDPCR3HD_01	NA	NA	NA	rs17558560	0.4	0.4	0.384	0.348842	0.4076	0.6617	0.2939	0.121	0.3129	0.42	0.65	0.31	0.12	0.4051	0.65	0.09	T	0.152	B	0.314	B	0.002	N	0.015	P	1.775	L	-1.63	D	-0.888	T	0.000	T	0.037	2.61	14.69	3.41	0.639	0.735	11.131	2.609788	2.609788	0.03	0.435698	0.157512	NA	0.333	NA	10.0849354
644	9	91994433	91994433	C	T	exonic	SEMA4D	NA	nonsynonymous SNV	SEMA4D:NM_006378:exon18:c.G1775A:p.G592D	exonic	ENSG00000187764	NA	nonsynonymous SNV	ENSG00000187764:ENST00000422704:exon16:c.G1775A:p.G592D,ENSG00000187764:ENST00000450295:exon16:c.G1775A:p.G592D,ENSG00000187764:ENST00000356444:exon17:c.G1775A:p.G592D,ENSG00000187764:ENST00000438547:exon18:c.G1775A:p.G592D	NA	NA	9q22.2	Score=798;Name=V$PPARG_03	NA	NA	NA	rs45464494	0.04	0.04	0.039	0.04373	0.0845	NA	0.0375	0.003	0.1063	0.08	NA	0.04	0.01	0.0766	0.11	0.77	T	0.0	B	0.001	B	0.281	N	1.000	P	-0.145	N	1.94	T	-0.989	T	0.001	T	0.04	-0.004	3.996	3.07	0.676	2.059	5.974	-0.003557	NA	0.38	0.088256	0.015433	NA	0.072	NA	10.0839774
644	21	47556882	47556882	G	A	UTR3	FTCD	NM_206965:c.*19C>T	NA	NA	exonic	ENSG00000160282	NA	nonsynonymous SNV	ENSG00000160282:ENST00000359679:exon14:c.C1625T:p.P542L,ENSG00000160282:ENST00000397748:exon14:c.C1625T:p.P542L	NA	NA	21q22.3	NA	NA	NA	NA	rs79622089	0.05	0.05	0.045	0.0355431	0.0915	0.006	0.0403	0.034	0.0072	0.08	0.01	0.05	0.05	0.0631	0.095	0	D	0.001	B	0.0	B	.	.	1.000	N	.	.	-0.72	T	-1.043	T	0.003	T	0.181	-1.374	0.026	-3.34	-1.427	-4.010	4.692	-1.373792	NA	0	0.094884	0.047457	NA	0.014	NA	10.0838494
644	18	57026361	57026361	A	G	exonic	LMAN1	NA	nonsynonymous SNV	LMAN1:NM_005570:exon1:c.T116C:p.V39A	exonic	ENSG00000074695	NA	nonsynonymous SNV	ENSG00000074695:ENST00000251047:exon1:c.T116C:p.V39A	NA	NA	18q21.32	NA	Name=HEY1,NFKB,TBP,YY1,Sin3Ak-20,Pol2-4H8,ELF1_(SC-631),TAF1,Pol2,NRSF,YY1_(C-20)	NA	NA	rs33926449	0.08	0.08	0.085	0.0754792	0.0964	NA	0.0764	0.143	0.0399	0.09	NA	0.09	0.14	0.0701	0.14	0.83	T	0.0	B	0.0	B	0.281	N	1.000	P	0	N	0.65	T	-1.024	T	0.000	T	0.019	-1.773	0.01	-5.14	-1.538	-0.169	9.594	-1.772631	NA	1	0.086532	0.128688	NA	0.043	NA	10.0803014
644	4	38800214	38800214	C	G	exonic	TLR1	NA	nonsynonymous SNV	TLR1:NM_003263:exon4:c.G239C:p.R80T	exonic	ENSG00000174125	NA	nonsynonymous SNV	ENSG00000174125:ENST00000505940:exon2:c.G239C:p.R80T,ENSG00000174125:ENST00000502213:exon3:c.G239C:p.R80T,ENSG00000174125:ENST00000515861:exon3:c.G239C:p.R80T,ENSG00000174125:ENST00000308979:exon4:c.G239C:p.R80T	NA	NA	4p14	NA	NA	NA	NA	rs5743611	0.04	0.04	0.03	0.0225639	0.0934	NA	0.013	0.0061	0.002	0.1	NA	0.01	0.01	0.0689	0.1	0.05	D	0.132	B	0.142	B	0.079	N	1.000	P	2.31	M	0.22	T	-0.669	T	0.027	T	0.368	0.772	8.08	3.22	0.794	0.057	3.840	0.772095	NA	0.06	0.090814	0.014072	NA	0.08	NA	10.0802194
644	20	45315769	45315769	T	C	exonic	TP53RK	NA	nonsynonymous SNV	TP53RK:NM_033550:exon2:c.A385G:p.T129A	exonic	ENSG00000172315	NA	nonsynonymous SNV	ENSG00000172315:ENST00000372114:exon2:c.A385G:p.T129A	NA	NA	20q13.12	NA	NA	NA	NA	rs11550540	0.04	0.04	0.048	0.0273562	0.0905	0.001	0.0346	0.0023	0.0184	0.1	NA	0.03	0.01	0.0661	0.1	0.66	T	0.007	B	0.011	B	0.024	N	0.826	D	0.835	L	2.02	T	-0.984	T	0.001	T	0.008	-0.776	0.742	3.0	0.447	1.561	3.869	-0.775919	NA	0.63	0.09686	0.016576	NA	0.087	NA	10.0798734
644	10	129901747	129901747	C	T	exonic	MKI67	NA	nonsynonymous SNV	MKI67:NM_001145966:exon12:c.G7277A:p.R2426Q,MKI67:NM_002417:exon13:c.G8357A:p.R2786Q	exonic	ENSG00000148773	NA	nonsynonymous SNV	ENSG00000148773:ENST00000368653:exon12:c.G7277A:p.R2426Q,ENSG00000148773:ENST00000368654:exon13:c.G8357A:p.R2786Q	NA	NA	10q26.2	NA	NA	NA	NA	rs10764749	0.2	0.2	0.195	0.179712	0.2704	0.1181	0.3112	0.0787	0.1933	0.27	0.15	0.33	0.06	0.2361	0.33	0.63	T	0.991	D	0.644	P	.	.	1.000	P	0.06	N	4.57	T	-0.969	T	0.000	T	0.054	3.066	16.23	-5.02	-1.121	-0.829	0.584	3.065692	3.065692	0.43	0.247791	0.093509	NA	0.13	NA	10.0790424
644	10	129901501	129901501	G	C	exonic	MKI67	NA	nonsynonymous SNV	MKI67:NM_001145966:exon12:c.C7523G:p.T2508S,MKI67:NM_002417:exon13:c.C8603G:p.T2868S	exonic	ENSG00000148773	NA	nonsynonymous SNV	ENSG00000148773:ENST00000368653:exon12:c.C7523G:p.T2508S,ENSG00000148773:ENST00000368654:exon13:c.C8603G:p.T2868S	NA	NA	10q26.2	NA	NA	Name=2	NA	rs2071496	0.2	0.2	0.179	0.180312	0.2714	0.119	0.3112	0.0787	0.1943	0.27	0.15	0.33	0.06	0.2359	0.33	0.77	T	0.99	D	0.798	P	.	.	1.000	P	1.01	L	4.33	T	-1.018	T	0.000	T	0.035	1.751	11.81	-2.31	-0.761	-0.652	2.895	1.750579	1.750579	0.33	0.247674	0.09419	ID=COSM146353;OCCURENCE=1(stomach)	0.138	NA	10.0783594
644	21	47581835	47581835	C	T	exonic	SPATC1L	NA	nonsynonymous SNV	SPATC1L:NM_032261:exon3:c.G229A:p.E77K,SPATC1L:NM_001142854:exon4:c.G691A:p.E231K	exonic	ENSG00000160284	NA	nonsynonymous SNV	ENSG00000160284:ENST00000330205:exon3:c.G229A:p.E77K,ENSG00000160284:ENST00000291672:exon4:c.G691A:p.E231K	Score=419;Name=lod=67	NA	21q22.3	NA	NA	NA	NA	rs113710653	0.05	0.05	0.057	0.0405351	0.0964	0.0139	0.0504	0.0106	0.044	0.09	0.01	0.06	0.01	0.0741	0.09	0.67	T	0.0	B	0.0	B	0.001	N	1.000	N	-1.39	N	1.14	T	-1.003	T	0.001	T	0.057	0.675	7.612	3.27	0.117	1.022	4.598	0.674926	NA	0.61	0.086906	0.01596	NA	0.014	NA	10.0759274
644	3	179306775	179306775	C	T	exonic	MRPL47	NA	nonsynonymous SNV	MRPL47:NM_177988:exon6:c.G308A:p.R103H,MRPL47:NM_020409:exon7:c.G638A:p.R213H	exonic	ENSG00000136522	NA	nonsynonymous SNV	ENSG00000136522:ENST00000392659:exon6:c.G308A:p.R103H,ENSG00000136522:ENST00000259038:exon7:c.G578A:p.R193H,ENSG00000136522:ENST00000476781:exon7:c.G638A:p.R213H	NA	NA	3q26.33	NA	NA	NA	NA	rs10513762	0.1	0.1	0.111	0.119808	0.0795	0.1002	0.147	0.1051	0.182	0.08	0.1	0.14	0.12	0.1008	0.23	0.13	T	0.971	D	0.424	B	0.419	N	1.000	P	0.695	N	1.43	T	-1.083	T	0.001	T	0.103	-0.124	3.395	-2.01	-0.508	1.085	4.352	-0.123521	NA	0.04	0.077907	0.092147	ID=COSM149520;OCCURENCE=1(stomach)	0.167	NA	10.0751264
645	3	47282303	47282303	G	A	exonic	KIF9	NA	nonsynonymous SNV	KIF9:NM_022342:exon16:c.C1717T:p.R573W,KIF9:NM_182902:exon17:c.C1912T:p.R638W,KIF9:NM_001134878:exon18:c.C1912T:p.R638W	exonic	ENSG00000088727	NA	nonsynonymous SNV	ENSG00000088727:ENST00000352910:exon15:c.C1438T:p.R480W,ENSG00000088727:ENST00000444589:exon16:c.C1717T:p.R573W,ENSG00000088727:ENST00000335044:exon17:c.C1912T:p.R638W,ENSG00000088727:ENST00000265529:exon18:c.C1912T:p.R638W,ENSG00000088727:ENST00000452770:exon18:c.C1912T:p.R638W	NA	NA	3p21.31	NA	NA	NA	NA	rs2276853	0.56	0.56	0.53	0.560104	0.5994	0.5357	0.5504	0.5121	0.6166	0.6	0.53	0.57	0.52	0.5723	0.6	0.03	D	0.999	D	0.785	P	0.000	D	0.000	P	1.955	M	0.57	T	-0.892	T	0.000	T	0.489	3.71	18.84	1.97	0.398	0.807	9.232	3.71011	3.71011	0.02	0.587442	0.519519	ID=COSM149379;OCCURENCE=1(stomach)	0.616	NA	10.0741914
645	20	1559259	1559259	C	T	exonic	SIRPB1	NA	nonsynonymous SNV	SIRPB1:NM_001083910:exon2:c.G158A:p.R53H,SIRPB1:NM_006065:exon2:c.G158A:p.R53H	exonic	ENSG00000101307,ENSG00000260861	NA	nonsynonymous SNV	ENSG00000101307:ENST00000262929:exon2:c.G155A:p.R52H,ENSG00000101307:ENST00000381603:exon2:c.G158A:p.R53H,ENSG00000101307:ENST00000381605:exon2:c.G158A:p.R53H,ENSG00000101307:ENST00000563840:exon2:c.G155A:p.R52H,ENSG00000260861:ENST00000564763:exon2:c.G158A:p.R53H,ENSG00000260861:ENST00000567028:exon2:c.G155A:p.R52H	NA	NA	20p13	NA	NA	NA	NA	rs2746603	0.04	0.04	0.026	0.0279553	0.0855	NA	0.0533	0.003	0.0133	0.07	NA	0.06	0.002	0.069	0.11	0.54	T	0.0	B	0.001	B	0.073	N	1.000	N	0.535	N	-0.16	T	-1.044	T	0.003	T	0.053	0.176	4.95	-4.72	-2.799	-3.462	7.858	0.176424	NA	0.38	0.105294	0.018898	ID=COSM443472;OCCURENCE=1(breast)	0.014	NA	10.0735394
645	10	129906674	129906674	T	C	exonic	MKI67	NA	nonsynonymous SNV	MKI67:NM_001145966:exon12:c.A2350G:p.K784E,MKI67:NM_002417:exon13:c.A3430G:p.K1144E	exonic	ENSG00000148773	NA	nonsynonymous SNV	ENSG00000148773:ENST00000368653:exon12:c.A2350G:p.K784E,ENSG00000148773:ENST00000368654:exon13:c.A3430G:p.K1144E	NA	NA	10q26.2	NA	NA	NA	NA	rs41300566	0.04	0.04	0.037	0.0397364	0.0944	NA	0.0648	0.0008	0.0593	0.09	0.0017	0.06	0.0041	0.0698	0.099	0.39	T	0.896	P	0.489	P	.	.	1.000	P	2.08	M	3.74	T	-0.994	T	0.001	T	0.108	1.446	10.78	2.43	0.548	0.108	8.090	1.445892	1.445892	0.09	0.098605	0.019065	NA	0.051	NA	10.0705284
645	11	123886307	123886307	C	T	exonic	OR10G4	NA	nonsynonymous SNV	OR10G4:NM_001004462:exon1:c.C26T:p.A9V	exonic	ENSG00000254737	NA	nonsynonymous SNV	ENSG00000254737:ENST00000320891:exon1:c.C26T:p.A9V	NA	NA	11q24.1	NA	NA	NA	NA	rs79057843	0.28	0.28	0.336	0.309505	0.4334	0.2093	0.3357	0.2587	0.3354	0.35	0.22	0.33	0.19	0.4028	0.43	0.02	D	0.0	B	0.001	B	0.326	N	1.000	P	-0.48	N	5.34	T	-0.943	T	0.000	T	0.019	1.15	9.683	-5.4	-2.100	-2.071	2.090	1.149889	NA	0.03	0.427774	0.298138	ID=COSM147348;OCCURENCE=1(stomach)	NA	NA	10.0693594
645	8	125562029	125562029	C	T	exonic	NDUFB9	NA	nonsynonymous SNV	NDUFB9:NM_005005:exon4:c.C436T:p.P146S	exonic	ENSG00000147684	NA	nonsynonymous SNV	ENSG00000147684:ENST00000276689:exon4:c.C436T:p.P146S,ENSG00000147684:ENST00000517367:exon4:c.C403T:p.P135S	NA	NA	8q24.13	Score=893;Name=V$MYOD_01	Name=CTCF_(SC-5916),CTCF	Name=7	NA	rs10195	0.11	0.11	0.121	0.102835	0.0915	0.1558	0.0519	0.1309	0.0583	0.09	0.14	0.05	0.16	0.0926	0.16	0.15	T	0.007	B	0.008	B	0.360	N	1.000	P	0.84	L	-0.52	T	-1.061	T	0.001	T	0.084	1.608	11.33	-0.336	-0.294	-0.292	16.947	1.607689	1.607689	0.18	0.084186	0.102587	NA	0.087	NA	10.0650474
646	1	22216604	22216604	C	G	exonic	HSPG2	NA	synonymous SNV	HSPG2:NM_005529:exon6:c.G444C:p.L148L	exonic	ENSG00000142798	NA	nonsynonymous SNV	ENSG00000142798:ENST00000412328:exon3:c.G212C:p.W71S	Score=541;Name=lod=210	NA	1p36.12	NA	NA	NA	NA	rs2254357	0.45	0.45	0.453	0.444489	0.6839	0.3522	0.4164	0.2163	0.6217	0.67	0.35	0.45	0.24	0.577	0.68	0.91	T	0.946	P	0.509	P	.	.	0.000	P	.	.	0.56	T	-1.050	T	0.000	T	.	0.101	4.543	4.5	2.837	1.469	14.050	0.100844	NA	1	0.677093	0.302996	NA	0.457	NA	10.062007
646	5	52358757	52358757	G	A	exonic	ITGA2	NA	nonsynonymous SNV	ITGA2:NM_002203:exon13:c.G1600A:p.E534K	exonic	ENSG00000164171	NA	nonsynonymous SNV	ENSG00000164171:ENST00000296585:exon13:c.G1600A:p.E534K,ENSG00000164171:ENST00000509814:exon13:c.G1600A:p.E534K,ENSG00000164171:ENST00000509960:exon13:c.G1600A:p.E534K,ENSG00000164171:ENST00000510722:exon13:c.G1600A:p.E534K	Score=594;Name=lod=347	NA	5q11.2	NA	NA	NA	NA	rs1801106	0.11	0.11	0.113	0.104233	0.0885	0.0317	0.0663	0.2035	0.0879	0.09	0.03	0.06	0.26	0.089	0.26	0.46	T	0.0	B	0.0	B	0.000	N	1.000	P	.	.	1.87	T	-0.944	T	0.000	T	0.101	0.702	7.743	4.8	0.513	2.980	8.798	0.701728	NA	1	0.095698	0.181344	NA	0.109	NA	10.0601354
646	12	31648826	31648826	C	T	exonic	DENND5B	NA	nonsynonymous SNV	DENND5B:NM_144973:exon2:c.G155A:p.R52K	exonic	ENSG00000170456	NA	nonsynonymous SNV	ENSG00000170456:ENST00000546299:exon1:c.G11A:p.R4K,ENSG00000170456:ENST00000389082:exon2:c.G155A:p.R52K,ENSG00000170456:ENST00000306833:exon3:c.G260A:p.R87K,ENSG00000170456:ENST00000354285:exon3:c.G221A:p.R74K,ENSG00000170456:ENST00000536562:exon4:c.G260A:p.R87K	Score=647;Name=lod=569	NA	12p11.21	NA	NA	NA	NA	rs4930979	0.42	0.42	0.362	0.396565	0.4165	0.5734	0.6095	0.084	0.4652	0.42	0.58	0.57	0.1	0.4553	0.58	0.26	T	0.004	B	0.03	B	0.000	N	0.000	P	0.74	N	3.82	T	-0.949	T	0.000	T	0.171	2.323	13.73	3.71	1.277	1.535	11.863	2.32302	2.32302	0.25	0.401543	0.125824	NA	0.384	NA	10.0599904
646	4	944210	944210	A	C	exonic	TMEM175	NA	nonsynonymous SNV	TMEM175:NM_032326:exon4:c.A194C:p.Q65P	exonic;splicing	ENSG00000127419;ENSG00000127419	ENST00000507319:exon4:c.193-2A>C,ENST00000504744:exon5:c.398-2A>C	nonsynonymous SNV	ENSG00000127419:ENST00000514453:exon3:c.A155C:p.Q52P,ENSG00000127419:ENST00000264771:exon4:c.A194C:p.Q65P,ENSG00000127419:ENST00000514546:exon5:c.A194C:p.Q65P	Score=378;Name=lod=46	NA	4p16.3	NA	NA	NA	NA	rs34884217	0.04	0.04	0.031	0.0321486	0.0964	0.001	0.049	0.0023	0.0266	0.08	NA	0.06	0.01	0.0703	0.11	0.27	T	0.003	B	0.005	B	0.359	N	1.000	D	-0.345	N	1.0	T	-1.022	T	0.001	T	0.375	-0.586	1.373	0.563	0.233	4.186	4.374	-0.585596	NA	0.18	0.107093	0.022923	NA	0.043	NA	10.0595404
646	2	232263127	232263127	G	A	exonic	B3GNT7	NA	nonsynonymous SNV	B3GNT7:NM_145236:exon2:c.G697A:p.V233I	exonic	ENSG00000156966	NA	nonsynonymous SNV	ENSG00000156966:ENST00000287590:exon2:c.G697A:p.V233I	NA	NA	2q37.1	NA	NA	NA	NA	rs2290130	0.24	0.24	0.234	0.233227	0.2833	0.2381	0.2378	0.1551	0.2791	0.29	0.23	0.21	0.18	0.2468	0.29	0.2	T	0.954	P	0.297	B	0.010	N	1.000	P	1.63	L	1.01	T	-0.996	T	0.000	T	0.057	2.2	13.31	3.84	0.988	4.133	10.276	2.200387	2.200387	0.09	0.244101	0.151344	NA	0.232	NA	10.0591324
646	3	33879770	33879770	G	A	exonic	PDCD6IP	NA	nonsynonymous SNV	PDCD6IP:NM_001162429:exon9:c.G1147A:p.V383I,PDCD6IP:NM_013374:exon9:c.G1132A:p.V378I	exonic	ENSG00000170248	NA	nonsynonymous SNV	ENSG00000170248:ENST00000307296:exon9:c.G1132A:p.V378I,ENSG00000170248:ENST00000457054:exon9:c.G1147A:p.V383I	Score=580;Name=lod=303	NA	3p22.3	NA	NA	NA	NA	rs3203777	0.3	0.3	0.285	0.29353	0.4523	0.3442	0.2334	0.0151	0.4969	0.47	0.34	0.25	0.02	0.3795	0.47	0.25	T	0.022	B	0.056	B	0.000	N	0.000	P	0.955	L	2.03	T	-0.908	T	0.000	T	0.138	3.093	16.33	4.92	2.281	8.057	11.606	3.09306	3.09306	0.21	0.443023	0.086019	ID=COSM149352;OCCURENCE=1(stomach)	0.37	NA	10.0585104
646	1	111783982	111783982	C	T	exonic	CHI3L2	NA	nonsynonymous SNV	CHI3L2:NM_001025197:exon8:c.C922T:p.R308W,CHI3L2:NM_001025199:exon8:c.C715T:p.R239W,CHI3L2:NM_004000:exon9:c.C952T:p.R318W	exonic	ENSG00000064886	NA	nonsynonymous SNV	ENSG00000064886:ENST00000472825:exon2:c.C40T:p.R14W,ENSG00000064886:ENST00000497220:exon4:c.C331T:p.R111W,ENSG00000064886:ENST00000369744:exon8:c.C922T:p.R308W,ENSG00000064886:ENST00000466741:exon8:c.C715T:p.R239W,ENSG00000064886:ENST00000524472:exon8:c.C715T:p.R239W,ENSG00000064886:ENST00000369748:exon9:c.C952T:p.R318W,ENSG00000064886:ENST00000445067:exon11:c.C952T:p.R318W	NA	NA	1p13.3	NA	NA	NA	NA	rs13721	NA	NA	NA	0.108826	0.1262	0.0913	0.2493	0.0038	0.1513	NA	NA	NA	NA	0.1495	0.087	1	T	1.0	D	0.992	D	0.041	U	1.000	N	0.48	N	3.52	T	-1.037	T	0.013	T	0.247	0.325	5.762	3.59	0.444	0.388	4.273	0.324941	NA	0.22	NA	NA	NA	0.109	NA	10.0576334
647	2	69040500	69040500	G	A	exonic	ARHGAP25	NA	synonymous SNV	ARHGAP25:NM_001166276:exon5:c.G735A:p.Q245Q,ARHGAP25:NM_001166277:exon5:c.G636A:p.Q212Q,ARHGAP25:NM_014882:exon5:c.G732A:p.Q244Q,ARHGAP25:NM_001007231:exon6:c.G756A:p.Q252Q	exonic	ENSG00000163219	NA	synonymous SNV	ENSG00000163219:ENST00000409030:exon5:c.G732A:p.Q244Q,ENSG00000163219:ENST00000409220:exon5:c.G735A:p.Q245Q,ENSG00000163219:ENST00000467265:exon5:c.G636A:p.Q212Q,ENSG00000163219:ENST00000497079:exon5:c.G735A:p.Q245Q,ENSG00000163219:ENST00000295381:exon6:c.G753A:p.Q251Q,ENSG00000163219:ENST00000409202:exon6:c.G756A:p.Q252Q,ENSG00000163219:ENST00000544262:exon6:c.G678A:p.Q226Q,ENSG00000163219:ENST00000463483:exon7:c.G678A:p.Q226Q	Score=534;Name=lod=198	NA	2p13.3	Score=818;Name=V$RFX1_01	NA	NA	NA	rs2280310	0.28	0.28	0.285	0.297724	0.1839	0.4425	0.3213	0.2927	0.2556	0.18	0.39	0.31	0.28	0.2363	0.39	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.967	T	0.000	T	.	1.032	9.214	3.62	1.432	0.624	12.366	1.031745	NA	NA	0.192209	0.269859	ID=COSM148873;OCCURENCE=1(stomach)	0.225	NA	10.0542576
647	16	1254369	1254369	C	T	exonic	CACNA1H	NA	nonsynonymous SNV	CACNA1H:NM_001005407:exon10:c.C2362T:p.R788C,CACNA1H:NM_021098:exon10:c.C2362T:p.R788C	exonic	ENSG00000196557	NA	nonsynonymous SNV	ENSG00000196557:ENST00000565831:exon9:c.C2362T:p.R788C,ENSG00000196557:ENST00000348261:exon10:c.C2362T:p.R788C,ENSG00000196557:ENST00000358590:exon10:c.C2362T:p.R788C	NA	NA	16p13.3	NA	NA	NA	NA	rs3751664	0.07	0.07	0.077	0.0467252	0.0875	0.1012	0.0447	0.0023	0.0102	0.1	0.1	0.05	0.0041	0.0887	0.1	0.02	D	0.1	B	0.035	B	0.287	N	1.000	P	1.65	L	-4.13	D	-0.337	T	0.097	T	0.523	0.627	7.372	0.508	0.285	-0.310	6.816	0.627044	NA	0.05	0.103229	0.015428	NA	0.036	CLINSIG=other|non-pathogenic;CLNDBN=Epilepsy\x2c_childhood_absence_6|not_specified;CLNREVSTAT=single|single;CLNACC=RCV000002823.1|RCV000082068.1;CLNDSDB=MedGen:OMIM|.;CLNDSDBID=C2749872:611942|.	10.0539044
647	17	66449122	66449122	G	A	exonic	WIPI1	NA	nonsynonymous SNV	WIPI1:NM_017983:exon2:c.C92T:p.T31I	exonic	ENSG00000070540	NA	nonsynonymous SNV	ENSG00000070540:ENST00000262139:exon2:c.C92T:p.T31I,ENSG00000070540:ENST00000589316:exon2:c.C92T:p.T31I	Score=444;Name=lod=85	NA	17q24.2	Score=762;Name=V$MIF1_01	NA	Name=18	NA	rs883541	0.72	0.72	0.737	0.736222	0.7634	0.5337	0.6902	0.8533	0.7914	0.77	0.56	0.7	0.85	0.7469	0.85	0.24	T	0.0	B	0.0	B	0.000	N	0.000	P	-1.73	N	0.37	T	-0.977	T	0.000	T	0.114	1.468	10.85	5.02	0.536	6.391	8.224	1.467786	1.467786	0.26	0.769767	0.827962	NA	0.783	NA	10.0532664
647	19	9065203	9065203	T	C	exonic	MUC16	NA	nonsynonymous SNV	MUC16:NM_024690:exon3:c.A22243G:p.S7415G	exonic	ENSG00000181143	NA	nonsynonymous SNV	ENSG00000181143:ENST00000397910:exon3:c.A22243G:p.S7415G	NA	NA	19p13.2	NA	NA	NA	NA	rs62118307	0.17	0.17	0.145	0.166933	0.0855	0.2679	0.183	0.1626	0.1411	0.09	0.3	0.16	0.15	0.1177	0.3	0	D	0.005	B	0.003	B	.	.	.	.	0.805	L	1.93	T	-0.947	T	0.000	T	0.031	0.111	4.596	-2.82	-0.825	-1.098	3.887	0.110781	NA	0.29	0.077172	0.148395	NA	0.174	NA	10.0529614
647	17	10346781	10346781	T	C	exonic	MYH4	NA	nonsynonymous SNV	MYH4:NM_017533:exon40:c.A5731G:p.K1911E	exonic	ENSG00000264424	NA	nonsynonymous SNV	ENSG00000264424:ENST00000255381:exon40:c.A5731G:p.K1911E	Score=474;Name=lod=113	NA	17p13.1	NA	NA	NA	NA	rs3744554	0.52	0.52	0.453	0.533147	0.3698	0.8631	0.5245	0.3336	0.637	0.37	0.87	0.51	0.32	0.495	0.87	1	T	0.0	B	0.0	B	0.003	N	1.000	P	-2.63	N	-1.67	D	-0.931	T	0.000	T	0.041	-0.305	2.548	4.23	0.912	1.988	12.116	-0.304632	NA	NA	0.416977	0.353155	NA	0.58	NA	10.0515564
647	19	11526759	11526759	G	A	exonic	RGL3	NA	nonsynonymous SNV	RGL3:NM_001035223:exon5:c.C491T:p.A164V,RGL3:NM_001161616:exon5:c.C491T:p.A164V	exonic	ENSG00000205517	NA	nonsynonymous SNV	ENSG00000205517:ENST00000567431:exon4:c.C383T:p.A128V,ENSG00000205517:ENST00000380456:exon5:c.C491T:p.A164V,ENSG00000205517:ENST00000393423:exon5:c.C491T:p.A164V,ENSG00000205517:ENST00000567080:exon5:c.C457T:p.P153S	Score=417;Name=lod=66	NA	19p13.2	NA	NA	NA	NA	rs160838	0.64	0.64	0.635	0.639177	0.6014	0.6766	0.719	0.6747	0.5348	0.62	0.66	0.66	0.66	0.6067	0.71	0.32	T	0.574	P	0.184	B	0.742	N	0.987	P	0.97	L	0.7	T	-0.946	T	0.000	T	0.3	1.902	12.32	2.56	0.979	2.116	8.122	1.901814	1.901814	0.02	0.576047	0.671584	NA	0.703	NA	10.0491864
647	12	15095558	15095558	C	G	exonic	ARHGDIB	NA	synonymous SNV	ARHGDIB:NM_001175:exon6:c.G504C:p.A168A	exonic	ENSG00000111348	NA	synonymous SNV	ENSG00000111348:ENST00000228945:exon6:c.G504C:p.A168A,ENSG00000111348:ENST00000541644:exon6:c.G504C:p.A168A,ENSG00000111348:ENST00000541546:exon7:c.G504C:p.A168A	Score=563;Name=lod=259	NA	12p12.3	NA	NA	Name=4	NA	rs4703	0.52	0.52	0.49	0.481829	0.5606	0.5714	0.5418	0.4062	0.3681	0.58	0.56	0.55	0.38	0.5273	0.58	0	D	.	.	.	.	0.000	D	0.000	P	.	.	.	.	-0.942	T	0.000	T	.	1.256	10.09	0.426	-0.017	1.293	2.097	1.25567	1.25567	NA	0.53	0.424875	NA	0.609	NA	10.0487666
647	2	216300482	216300482	T	A	exonic	FN1	NA	nonsynonymous SNV	FN1:NM_002026:exon1:c.A44T:p.Q15L,FN1:NM_054034:exon1:c.A44T:p.Q15L,FN1:NM_212474:exon1:c.A44T:p.Q15L,FN1:NM_212476:exon1:c.A44T:p.Q15L,FN1:NM_212478:exon1:c.A44T:p.Q15L,FN1:NM_212482:exon1:c.A44T:p.Q15L	exonic	ENSG00000115414	NA	nonsynonymous SNV	ENSG00000115414:ENST00000323926:exon1:c.A44T:p.Q15L,ENSG00000115414:ENST00000336916:exon1:c.A44T:p.Q15L,ENSG00000115414:ENST00000345488:exon1:c.A44T:p.Q15L,ENSG00000115414:ENST00000346544:exon1:c.A44T:p.Q15L,ENSG00000115414:ENST00000354785:exon1:c.A44T:p.Q15L,ENSG00000115414:ENST00000356005:exon1:c.A44T:p.Q15L,ENSG00000115414:ENST00000357009:exon1:c.A44T:p.Q15L,ENSG00000115414:ENST00000357867:exon1:c.A44T:p.Q15L,ENSG00000115414:ENST00000359671:exon1:c.A44T:p.Q15L,ENSG00000115414:ENST00000421182:exon1:c.A44T:p.Q15L,ENSG00000115414:ENST00000426059:exon1:c.A44T:p.Q15L,ENSG00000115414:ENST00000432072:exon1:c.A44T:p.Q15L,ENSG00000115414:ENST00000443816:exon1:c.A44T:p.Q15L,ENSG00000115414:ENST00000446046:exon1:c.A44T:p.Q15L	Score=369;Name=lod=42	NA	2q35	NA	Name=Pol2,Pol2(b)	Name=39	NA	rs1250259	0.86	0.86	0.86	0.795128	0.7674	0.9246	0.7853	0.9009	0.5542	0.79	0.95	0.81	0.89	0.7691	0.95	1	T	0.007	B	0.009	B	0.088	N	1.000	P	-2.015	N	2.88	T	-0.961	T	0.000	T	0.109	0.764	8.042	5.35	0.873	3.387	11.474	0.764126	NA	1	0.74907	0.865577	NA	0.681	NA	10.0477634
647	19	9068530	9068530	C	T	exonic	MUC16	NA	nonsynonymous SNV	MUC16:NM_024690:exon3:c.G18916A:p.V6306M	exonic	ENSG00000181143	NA	nonsynonymous SNV	ENSG00000181143:ENST00000397910:exon3:c.G18916A:p.V6306M	NA	NA	19p13.2	NA	NA	NA	NA	rs7250080	0.18	0.18	0.177	0.189497	0.0845	0.2679	0.1888	0.2458	0.1411	0.09	0.3	0.17	0.2	0.1235	0.3	0	D	0.96	D	0.353	B	.	.	.	.	0.695	N	1.4	T	-0.971	T	0.000	T	0.018	-0.202	3.02	1.06	0.447	-1.485	4.846	-0.201996	NA	0.07	0.077605	0.218236	NA	0.188	NA	10.0477284
647	19	1055191	1055191	G	A	exonic	ABCA7	NA	nonsynonymous SNV	ABCA7:NM_019112:exon30:c.G4046A:p.R1349Q	exonic	ENSG00000064687	NA	nonsynonymous SNV	ENSG00000064687:ENST00000435683:exon24:c.G3632A:p.R1211Q,ENSG00000064687:ENST00000433129:exon29:c.G4046A:p.R1349Q,ENSG00000064687:ENST00000263094:exon30:c.G4046A:p.R1349Q	NA	NA	19p13.3	NA	NA	NA	NA	rs3745842	0.39	0.39	0.402	0.390575	0.4205	0.3482	0.4121	0.3585	0.4315	0.44	0.38	0.43	0.32	0.4433	0.44	0.61	T	0.008	B	0.004	B	.	.	1.000	P	-1.1	N	-3.46	D	-1.065	T	0.000	T	0.024	-0.079	3.615	-5.26	-1.084	-2.995	10.516	-0.078683	NA	0.44	0.422098	0.376024	NA	0.254	NA	10.0474354
647	15	27772676	27772676	C	T	exonic	GABRG3	NA	synonymous SNV	GABRG3:NM_033223:exon8:c.C963T:p.T321T	exonic	ENSG00000182256	NA	synonymous SNV	ENSG00000182256:ENST00000333743:exon8:c.C963T:p.T321T	Score=541;Name=lod=211	NA	15q12	NA	Name=Rad21,CTCF	NA	NA	rs140679	0.54	0.54	0.527	0.516374	0.5467	0.6577	0.6844	0.3026	0.5092	0.54	0.69	0.66	0.3	0.5373	0.69	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.149	T	0.000	T	.	1.175	9.78	-8.26	-2.099	-1.707	18.838	1.175068	NA	NA	0.535547	0.310861	NA	0.522	NA	10.0471196
647	1	165532746	165532746	T	A	exonic	LRRC52	NA	nonsynonymous SNV	LRRC52:NM_001005214:exon2:c.T627A:p.D209E	exonic	ENSG00000162763	NA	nonsynonymous SNV	ENSG00000162763:ENST00000294818:exon2:c.T627A:p.D209E	NA	NA	1q24.1	NA	NA	NA	NA	rs17407838	0.07	0.07	0.07	0.0585064	0.1034	NA	0.062	0.1006	0.0133	0.1	NA	0.06	0.1	0.0784	0.11	1	T	0.0	B	0.0	B	0.102	N	0.994	P	0	N	-0.12	T	-1.046	T	0.018	T	0.02	-2.044	0.006	-8.56	-3.350	-4.590	4.737	-2.043824	NA	NA	0.105233	0.093282	NA	0.065	NA	10.0463004
648	5	180039606	180039606	C	T	exonic	FLT4	NA	nonsynonymous SNV	FLT4:NM_002020:exon26:c.G3437A:p.R1146H,FLT4:NM_182925:exon26:c.G3437A:p.R1146H	exonic	ENSG00000037280	NA	nonsynonymous SNV	ENSG00000037280:ENST00000261937:exon26:c.G3437A:p.R1146H,ENSG00000037280:ENST00000393347:exon26:c.G3437A:p.R1146H,ENSG00000037280:ENST00000502649:exon26:c.G3437A:p.R1146H	Score=491;Name=lod=132	NA	5q35.3	NA	Name=CTCF	NA	NA	rs1130379	0.05	0.05	0.047	0.0341454	0.1173	NA	0.0288	0.003	0.0297	0.13	NA	0.03	0.0041	0.0757	0.13	0.2	T	0.004	B	0.005	B	.	.	0.995	P	0.805	L	-2.48	D	-0.948	T	0.009	T	0.105	0.715	7.806	-0.631	-0.027	0.885	8.402	0.714752	NA	0.27	0.1	0.021562	NA	NA	NA	10.0403334
648	12	9750669	9750669	A	G	exonic	KLRB1	NA	nonsynonymous SNV	KLRB1:NM_002258:exon5:c.T503C:p.I168T	exonic	ENSG00000111796	NA	nonsynonymous SNV	ENSG00000111796:ENST00000229402:exon5:c.T503C:p.I168T	Score=343;Name=lod=33	NA	12p13.31	NA	NA	NA	NA	rs1135816	0.4	0.4	0.363	0.403954	0.4205	0.5317	0.5029	0.1475	0.5317	0.43	0.52	0.44	0.16	0.446	0.52	0.03	D	0.953	P	0.802	P	0.005	N	0.948	P	1.31	L	1.76	T	-0.921	T	0.000	T	0.093	1.803	11.99	1.91	0.577	2.636	4.821	1.802709	1.802709	0	0.427906	0.170527	NA	0.341	NA	10.0389274
648	1	89522646	89522646	G	C	exonic	GBP1	NA	nonsynonymous SNV	GBP1:NM_002053:exon7:c.C1046G:p.T349S	exonic	ENSG00000117228	NA	nonsynonymous SNV	ENSG00000117228:ENST00000370473:exon7:c.C1046G:p.T349S	Score=437;Name=lod=80	NA	1p22.2	NA	NA	NA	NA	rs1048425	0.7	0.7	0.71	0.718251	0.7654	0.5595	0.6138	0.7958	0.8027	0.76	0.54	0.68	0.78	0.7451	0.81	0.06	T	0.254	B	0.438	B	0.000	N	1.000	P	3.09	M	3.92	T	-1.185	T	0.020	T	0.062	2.046	12.8	3.89	1.026	2.002	12.960	2.046072	2.046072	0.03	0.784419	0.812755	ID=COSM1344744;OCCURENCE=1(large_intestine)	0.616	NA	10.0384144
648	3	141162128	141162128	C	G	exonic	ZBTB38	NA	nonsynonymous SNV	ZBTB38:NM_001080412:exon8:c.C898G:p.P300A	exonic	ENSG00000177311	NA	nonsynonymous SNV	ENSG00000177311:ENST00000321464:exon2:c.C901G:p.P301A,ENSG00000177311:ENST00000441582:exon2:c.C898G:p.P300A,ENSG00000177311:ENST00000509883:exon3:c.C898G:p.P300A,ENSG00000177311:ENST00000514251:exon4:c.C898G:p.P300A	NA	NA	3q23	NA	NA	NA	NA	rs62282002	0.13	0.13	0.11	0.111222	0.0915	0.2192	0.2046	0.0053	0.0971	0.09	0.26	0.18	0.01	0.1153	0.26	.	.	0.104	B	0.058	B	0.230	N	1.000	P	0.695	N	3.39	T	-0.911	T	0.000	T	0.198	-0.637	1.183	5.28	2.611	1.548	7.196	-0.637454	NA	1	0.0887	0.019474	NA	0.058	NA	10.0378334
648	19	56733425	56733425	C	A	exonic	ZSCAN5A	NA	nonsynonymous SNV	ZSCAN5A:NM_024303:exon5:c.G1010T:p.G337V	exonic	ENSG00000131848	NA	nonsynonymous SNV	ENSG00000131848:ENST00000254165:exon5:c.G659T:p.G220V,ENSG00000131848:ENST00000391713:exon5:c.G1010T:p.G337V,ENSG00000131848:ENST00000587492:exon5:c.G572T:p.G191V,ENSG00000131848:ENST00000592355:exon5:c.G1007T:p.G336V,ENSG00000131848:ENST00000587340:exon7:c.G1010T:p.G337V	NA	NA	19q13.43	NA	Name=CTCF	NA	NA	rs34187696	0.2	0.2	0.183	0.160144	0.2813	0.1806	0.1542	0.0454	0.1738	0.28	0.2	0.17	0.07	0.225	0.29	0.33	T	0.993	D	0.881	P	.	.	1.000	P	2.34	M	3.16	T	-0.976	T	0.000	T	0.047	2.151	13.15	0.561	0.181	-0.082	5.376	2.151177	2.151177	0.01	0.289767	0.080799	ID=COSM148772;OCCURENCE=1(stomach)	0.225	NA	10.0372664
648	3	33194990	33194990	C	A	exonic	SUSD5	NA	nonsynonymous SNV	SUSD5:NM_015551:exon5:c.G1134T:p.E378D	exonic	ENSG00000173705	NA	nonsynonymous SNV	ENSG00000173705:ENST00000309558:exon5:c.G1134T:p.E378D	NA	NA	3p22.3	Score=943;Name=V$MEIS1_01	NA	NA	NA	rs6810039	0.63	0.63	0.614	0.659944	0.3936	0.8542	0.6441	0.7307	0.6493	0.41	0.89	0.57	0.74	0.5157	0.89	0.77	T	0.0	B	0.0	B	0.002	N	1.000	P	-2.015	N	3.36	T	-0.952	T	0.000	T	0.024	-0.407	2.099	-9.81	-2.418	-0.950	8.356	-0.406519	NA	1	0.386788	0.692878	NA	0.58	NA	10.0372454
648	13	52365354	52365354	G	T	exonic	DHRS12	NA	nonsynonymous SNV	DHRS12:NM_001031719:exon3:c.C166A:p.Q56K,DHRS12:NM_024705:exon3:c.C166A:p.Q56K,DHRS12:NM_001270424:exon4:c.C313A:p.Q105K	exonic	ENSG00000102796	NA	nonsynonymous SNV	ENSG00000102796:ENST00000218981:exon3:c.C166A:p.Q56K,ENSG00000102796:ENST00000280056:exon3:c.C166A:p.Q56K,ENSG00000102796:ENST00000444610:exon4:c.C313A:p.Q105K	Score=313;Name=lod=25	NA	13q14.3	NA	NA	NA	NA	rs61729904	0.07	0.07	0.054	0.0692891	0.0934	0.0516	0.1816	0.0076	0.0665	0.09	0.05	0.16	0.01	0.0932	0.16	0.07	T	0.007	B	0.032	B	0.108	N	1.000	P	1.805	L	2.93	T	-1.036	T	0.000	T	0.05	-2.518	0.003	-5.96	-1.351	-0.138	1.257	-2.518055	NA	0.68	0.111395	0.021562	NA	0.036	NA	10.0353384
649	8	17419539	17419539	G	A	exonic	SLC7A2	NA	nonsynonymous SNV	SLC7A2:NM_001008539:exon10:c.G1591A:p.A531T,SLC7A2:NM_001164771:exon10:c.G1711A:p.A571T,SLC7A2:NM_003046:exon10:c.G1708A:p.A570T	exonic	ENSG00000003989	NA	nonsynonymous SNV	ENSG00000003989:ENST00000004531:exon10:c.G1711A:p.A571T,ENSG00000003989:ENST00000398090:exon10:c.G1708A:p.A570T,ENSG00000003989:ENST00000522656:exon10:c.G1591A:p.A531T,ENSG00000003989:ENST00000494857:exon11:c.G1591A:p.A531T,ENSG00000003989:ENST00000470360:exon12:c.G1708A:p.A570T	NA	NA	8p22	NA	Name=Pol2	NA	NA	rs62622371	0.04	0.04	0.027	0.0261581	0.0865	NA	0.0403	0.0053	0.0092	0.08	NA	0.04	0.0041	0.0885	0.12	0.17	T	0.012	B	0.005	B	0.431	N	1.000	N	0.975	L	-2.25	D	-0.997	T	0.015	T	0.066	1.736	11.76	1.89	0.759	1.796	7.910	1.735861	1.735861	0.49	0.12407	0.024739	NA	0.065	NA	10.0342634
649	7	50514577	50514577	C	T	exonic	FIGNL1	NA	nonsynonymous SNV	FIGNL1:NM_001042762:exon4:c.G409A:p.V137M,FIGNL1:NM_022116:exon4:c.G409A:p.V137M	exonic	ENSG00000132436	NA	nonsynonymous SNV	ENSG00000132436:ENST00000419119:exon2:c.G409A:p.V137M,ENSG00000132436:ENST00000356889:exon4:c.G409A:p.V137M,ENSG00000132436:ENST00000395556:exon4:c.G409A:p.V137M,ENSG00000132436:ENST00000433017:exon4:c.G409A:p.V137M	NA	NA	7p12.1	NA	Name=CEBPB,GTF2F1_(RAP-74),p300,FOXA2_(SC-6554),BCL11A,MEF2A,IRF4_(M-17),TCF4,MEF2C_(SC-13268),p300_(N-15),Pol2-4H8,STAT3,JunD	Name=120	NA	rs10235371	0.07	0.07	0.082	0.063099	0.1153	0.0377	0.0836	0.0446	0.046	0.1	0.04	0.08	0.07	0.0815	0.1	0.11	T	0.437	B	0.115	B	0.342	N	1.000	P	1.59	L	1.96	T	-1.091	T	0.001	T	0.032	1.642	11.45	-4.56	-0.842	0.561	10.055	1.642477	1.642477	0.03	0.10407	0.046754	NA	0.152	NA	10.0324634
649	16	15098047	15098047	C	G	exonic	PDXDC1	NA	nonsynonymous SNV	PDXDC1:NM_015027:exon5:c.C246G:p.I82M	exonic	ENSG00000179889	NA	nonsynonymous SNV	ENSG00000179889:ENST00000450288:exon4:c.C162G:p.I54M,ENSG00000179889:ENST00000569715:exon4:c.C165G:p.I55M,ENSG00000179889:ENST00000325823:exon5:c.C201G:p.I67M,ENSG00000179889:ENST00000396410:exon5:c.C246G:p.I82M,ENSG00000179889:ENST00000455313:exon5:c.C246G:p.I82M,ENSG00000179889:ENST00000535621:exon5:c.C246G:p.I82M,ENSG00000179889:ENST00000563522:exon5:c.C201G:p.I67M,ENSG00000179889:ENST00000563679:exon5:c.C300G:p.I100M,ENSG00000179889:ENST00000567306:exon5:c.C201G:p.I67M	Score=667;Name=lod=683	NA	16p13.11	NA	NA	NA	NA	rs11549900	0.3	0.3	0.228	NA	NA	NA	NA	NA	NA	0.26	0.44	0.38	0.13	0.304	0.44	0.16	T	0.048	B	0.025	B	0.003	N	0.000	P	0	N	2.07	T	-0.914	T	0.000	T	0.394	0.416	6.258	2.76	0.455	1.821	9.103	0.415784	NA	0.14	NA	NA	NA	0.138	NA	10.0293334
649	10	115457264	115457264	T	G	exonic	CASP7	NA	nonsynonymous SNV	CASP7:NM_001227:exon2:c.T12G:p.D4E,CASP7:NM_001267056:exon2:c.T12G:p.D4E,CASP7:NM_001267057:exon2:c.T236G:p.I79S,CASP7:NM_033340:exon2:c.T12G:p.D4E,CASP7:NM_033338:exon3:c.T111G:p.D37E,CASP7:NM_033339:exon3:c.T12G:p.D4E	exonic	ENSG00000165806	NA	nonsynonymous SNV	ENSG00000165806:ENST00000369318:exon2:c.T12G:p.D4E,ENSG00000165806:ENST00000369331:exon2:c.T12G:p.D4E,ENSG00000165806:ENST00000429617:exon2:c.T12G:p.D4E,ENSG00000165806:ENST00000345633:exon3:c.T12G:p.D4E,ENSG00000165806:ENST00000369315:exon3:c.T12G:p.D4E,ENSG00000165806:ENST00000369321:exon3:c.T111G:p.D37E	NA	NA	10q25.3	NA	NA	NA	NA	rs11555408	0.11	0.11	0.109	0.105631	0.1044	0.0883	0.0807	0.146	0.0879	0.11	0.08	0.09	0.15	0.0971	0.15	0.28	T	0.865	P	0.476	P	0.103	N	0.888	P	1.935	M	4.37	T	-1.026	T	0.000	T	0.121	2.221	13.38	2.04	0.317	0.009	5.734	2.220932	2.220932	0	0.103721	0.123014	NA	0.087	NA	10.0281124
649	16	20648702	20648702	G	A	exonic	ACSM1	NA	synonymous SNV	ACSM1:NM_052956:exon8:c.C1188T:p.Y396Y	exonic	ENSG00000166743	NA	synonymous SNV	ENSG00000166743:ENST00000219151:exon8:c.C45T:p.Y15Y,ENSG00000166743:ENST00000307493:exon8:c.C1188T:p.Y396Y,ENSG00000166743:ENST00000520010:exon9:c.C1188T:p.Y396Y	NA	NA	16p12.3	NA	Name=CTCF	NA	NA	rs151328	0.31	0.31	0.316	0.346845	0.1799	0.3512	0.1916	0.5416	0.3609	0.2	0.34	0.2	0.52	0.2598	0.52	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-1.125	T	0.000	T	.	-1.451	0.019	-9.12	-1.806	-2.456	17.329	-1.451414	NA	NA	0.200698	0.494548	NA	0.355	NA	10.0262686
649	1	55541174	55541174	A	G	exonic	USP24	NA	nonsynonymous SNV	USP24:NM_015306:exon63:c.T7403C:p.V2468A	exonic	ENSG00000162402	NA	nonsynonymous SNV	ENSG00000162402:ENST00000407756:exon60:c.T6923C:p.V2308A,ENSG00000162402:ENST00000294383:exon63:c.T7403C:p.V2468A	Score=590;Name=lod=333	NA	1p32.3	NA	NA	NA	NA	rs487230	0.7	0.7	0.681	0.692292	0.7714	0.9187	0.8473	0.2648	0.8456	0.76	0.9	0.82	0.3	0.7697	0.9	0.86	T	0.0	B	0.001	B	0.001	D	0.695	P	-0.205	N	4.46	T	-1.024	T	0.000	T	0.217	1.955	12.49	4.22	1.158	5.139	11.412	1.954963	1.954963	0.23	0.76709	0.356754	NA	0.667	NA	10.0251434
650	22	50319079	50319079	T	G	exonic	CRELD2	NA	nonsynonymous SNV	CRELD2:NM_024324:exon9:c.T883G:p.S295A,CRELD2:NM_001135101:exon10:c.T1030G:p.S344A	exonic	ENSG00000184164	NA	nonsynonymous SNV	ENSG00000184164:ENST00000403427:exon8:c.T799G:p.S267A,ENSG00000184164:ENST00000407217:exon8:c.T787G:p.S263A,ENSG00000184164:ENST00000328268:exon9:c.T883G:p.S295A,ENSG00000184164:ENST00000404488:exon10:c.T1030G:p.S344A	Score=349;Name=lod=35	NA	22q13.33	NA	Name=EBF	NA	NA	rs11545762	0.08	0.08	0.068	0.067492	0.1193	0.0546	0.0735	0.0045	0.1084	0.13	0.06	0.09	0.01	0.0931	0.13	0.66	T	0.256	B	0.058	B	0.270	N	1.000	P	0.355	N	-2.77	D	-0.935	T	0.009	T	0.194	0.579	7.126	0.735	0.103	0.626	13.933	0.579015	NA	0.37	0.096744	0.020654	ID=COSM149318;OCCURENCE=1(stomach)	0.167	NA	10.0241894
650	4	71024099	71024099	A	G	exonic	C4orf40	NA	nonsynonymous SNV	C4orf40:NM_214711:exon3:c.A130G:p.I44V	exonic	ENSG00000187533	NA	nonsynonymous SNV	ENSG00000187533:ENST00000344526:exon3:c.A130G:p.I44V,ENSG00000187533:ENST00000502294:exon4:c.A130G:p.I44V	NA	NA	4q13.3	NA	NA	NA	NA	rs1612460	0.05	0.05	0.043	0.0385383	0.1133	0.002	0.0648	0.003	0.0286	0.12	0.0035	0.07	NA	0.0801	0.12	1	T	0.147	B	0.124	B	.	.	1.000	P	0.345	N	1.47	T	-1.026	T	0.001	T	0.047	-0.334	2.416	-3.16	-1.081	-1.545	2.897	-0.334292	NA	0.09	0.116163	0.021788	NA	0.145	NA	10.0237704
650	4	79300993	79300993	G	A	exonic	FRAS1	NA	nonsynonymous SNV	FRAS1:NM_001166133:exon27:c.G3406A:p.E1136K,FRAS1:NM_025074:exon27:c.G3406A:p.E1136K	exonic	ENSG00000138759	NA	nonsynonymous SNV	ENSG00000138759:ENST00000264895:exon27:c.G3406A:p.E1136K,ENSG00000138759:ENST00000325942:exon27:c.G3406A:p.E1136K	NA	NA	4q21.21	NA	NA	NA	NA	rs12512164	0.23	0.23	0.195	0.213259	0.2704	0.2173	0.3487	0.1195	0.181	0.27	0.22	0.32	0.13	0.2644	0.32	0.38	T	0.87	P	0.119	B	0.012	N	1.000	P	1.39	L	-1.0	T	-1.026	T	0.000	T	0.144	-0.046	3.779	3.55	1.351	3.882	7.925	-0.046038	NA	0.21	0.274787	0.148384	ID=COSM1131043,COSM1131042,COSM1131044;OCCURENCE=1(prostate)	0.297	NA	10.0237464
650	21	46021179	46021179	C	A	exonic	KRTAP10-7	NA	nonsynonymous SNV	KRTAP10-7:NM_198689:exon2:c.C643A:p.Q215K	exonic	ENSG00000205441	NA	nonsynonymous SNV	ENSG00000205441:ENST00000380102:exon1:c.C658A:p.Q220K	Score=383;Name=lod=48	NA	21q22.3	NA	NA	NA	NA	rs363877	0.75	0.75	0.79	0.774561	0.9354	0.8234	0.9121	0.5408	0.7771	0.88	0.73	0.84	0.51	0.8746	0.88	0.17	T	0.886	P	0.298	B	.	.	0.000	P	3.32	M	4.8	T	-1.045	T	0.000	T	0.315	1.171	9.765	2.77	1.804	0.149	8.906	1.17101	NA	0.15	NA	NA	NA	0.022	NA	10.0233334
650	2	26799031	26799031	G	A	exonic	C2orf70	NA	synonymous SNV	C2orf70:NM_001105519:exon2:c.G336A:p.T112T	exonic	ENSG00000173557	NA	nonsynonymous SNV	ENSG00000173557:ENST00000409392:exon3:c.G298A:p.E100K	NA	NA	2p23.3	NA	NA	NA	NA	rs2272464	0.35	0.35	0.332	0.359824	0.336	0.623	0.232	0.1785	0.4489	0.34	0.6	0.21	0.2	0.3436	0.6	0	D	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.997	T	0.000	T	.	0.784	8.134	-9.61	-3.293	-3.581	1.425	0.783761	NA	NA	0.297768	0.184832	NA	0.326	NA	10.022632
650	11	118967758	118967758	T	C	exonic	DPAGT1	NA	nonsynonymous SNV	DPAGT1:NM_001382:exon9:c.A1177G:p.I393V	exonic	ENSG00000172269	NA	nonsynonymous SNV	ENSG00000172269:ENST00000432443:exon7:c.A934G:p.I312V,ENSG00000172269:ENST00000354202:exon9:c.A1177G:p.I393V,ENSG00000172269:ENST00000409993:exon11:c.A1177G:p.I393V	NA	NA	11q23.3	NA	NA	NA	NA	rs643788	0.43	0.43	0.415	0.433307	0.4563	0.631	0.2983	0.2844	0.5031	0.44	0.62	0.35	0.24	0.4215	0.62	0.61	T	0.0	B	0.002	B	0.880	N	1.000	P	0.41	N	-2.63	D	-0.977	T	0.000	T	0.038	-1.647	0.012	-4.23	-0.993	-0.320	2.110	-1.64735	NA	0.45	0.433411	0.297045	NA	0.471	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000079665.2;CLNDSDB=.;CLNDSDBID=.	10.0221224
650	6	32363816	32363816	T	C	exonic	BTNL2	NA	nonsynonymous SNV	BTNL2:NM_019602:exon5:c.A1078G:p.S360G	exonic	ENSG00000204290	NA	nonsynonymous SNV	ENSG00000204290:ENST00000414363:exon3:c.A448G:p.S150G,ENSG00000204290:ENST00000540315:exon3:c.A448G:p.S150G,ENSG00000204290:ENST00000544175:exon4:c.A247G:p.S83G,ENSG00000204290:ENST00000374993:exon5:c.A1078G:p.S360G,ENSG00000204290:ENST00000374995:exon5:c.A796G:p.S266G,ENSG00000204290:ENST00000454136:exon5:c.A1078G:p.S360G	Score=304;Name=lod=23	Name=Sarcoidosis	6p21.32	NA	NA	NA	NA	rs2076530	0.38	0.38	0.377	0.386981	0.4473	0.2917	0.4841	0.3275	0.4346	0.43	0.34	0.49	0.25	0.426	0.49	.	.	0.0	B	0.0	B	0.064	N	0.000	P	-2.025	N	4.47	T	-0.975	T	0.001	T	0.056	-0.875	0.492	3.36	0.783	1.798	7.002	-0.875	NA	1	0.438354	0.32273	NA	0.42	NA	10.0216794
650	7	123256427	123256427	C	T	exonic	ASB15	NA	nonsynonymous SNV	ASB15:NM_080928:exon4:c.C170T:p.P57L	exonic	ENSG00000146809	NA	nonsynonymous SNV	ENSG00000146809:ENST00000275699:exon4:c.C170T:p.P57L,ENSG00000146809:ENST00000447789:exon4:c.C170T:p.P57L,ENSG00000146809:ENST00000540573:exon4:c.C170T:p.P57L,ENSG00000146809:ENST00000434204:exon5:c.C170T:p.P57L,ENSG00000146809:ENST00000437535:exon5:c.C170T:p.P57L,ENSG00000146809:ENST00000451215:exon6:c.C170T:p.P57L,ENSG00000146809:ENST00000451558:exon8:c.C170T:p.P57L	Score=509;Name=lod=156	NA	7q31.32	NA	NA	Name=27	NA	rs6962756	0.77	0.77	0.767	0.779353	0.7664	0.7927	0.6412	0.8139	0.8303	0.77	0.78	0.72	0.79	0.7785	0.82	0.73	T	0.0	B	0.0	B	0.058	N	0.998	P	-0.695	N	2.4	T	-0.965	T	0.000	T	0.376	0.862	8.492	5.94	1.075	1.201	5.071	0.862144	NA	0.38	0.768023	0.819255	NA	0.609	NA	10.0204104
650	4	123280860	123280860	T	C	exonic	KIAA1109	NA	synonymous SNV	KIAA1109:NM_015312:exon83:c.T14784C:p.H4928H	exonic	ENSG00000138688	NA	synonymous SNV	ENSG00000138688:ENST00000438707:exon29:c.T4791C:p.H1597H,ENSG00000138688:ENST00000388738:exon83:c.T14784C:p.H4928H,ENSG00000138688:ENST00000264501:exon85:c.T14784C:p.H4928H	Score=613;Name=lod=415	NA	4q27	NA	NA	NA	NA	rs1127348	0.14	0.14	0.118	0.121805	0.2416	0.123	0.1311	0.0068	0.1462	0.24	0.13	0.14	0.01	0.1913	0.24	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.081	T	0.000	T	.	0.637	7.423	5.94	2.282	2.379	12.246	0.637044	NA	NA	0.215332	0.038378	ID=COSM1426709;OCCURENCE=1(large_intestine)	0.116	NA	10.0184346
650	5	37182902	37182902	G	A	exonic	C5orf42	NA	nonsynonymous SNV	C5orf42:NM_023073:exon26:c.C5381T:p.P1794L	exonic	ENSG00000197603	NA	nonsynonymous SNV	ENSG00000197603:ENST00000509849:exon11:c.C2396T:p.P799L,ENSG00000197603:ENST00000514429:exon11:c.C2525T:p.P842L,ENSG00000197603:ENST00000508244:exon25:c.C5381T:p.P1794L,ENSG00000197603:ENST00000274258:exon26:c.C2024T:p.P675L,ENSG00000197603:ENST00000425232:exon26:c.C5381T:p.P1794L	NA	NA	5p13.2	NA	NA	NA	NA	rs75589774	0.08	0.08	0.069	0.0948482	0.0954	0.0665	0.1326	0.0832	0.1125	0.09	0.02	0.15	0.09	0.1109	0.15	1	T	0.383	B	0.155	B	0.076	N	0.998	P	0.345	N	2.28	T	-1.038	T	0.000	T	0.313	2.505	14.34	4.8	2.379	2.926	7.747	2.505049	2.505049	1	0.109419	0.082842	NA	0.029	NA	10.0176144
650	12	21713402	21713402	T	C	exonic	GYS2	NA	nonsynonymous SNV	GYS2:NM_021957:exon8:c.A1087G:p.M363V	exonic	ENSG00000111713	NA	nonsynonymous SNV	ENSG00000111713:ENST00000261195:exon8:c.A1087G:p.M363V	Score=536;Name=lod=202	NA	12p12.1	NA	Name=GR	Name=66	NA	rs2306180	0.75	0.75	0.73	0.740615	0.7704	0.7629	0.7579	0.6407	0.8098	0.79	0.77	0.75	0.68	0.7686	0.79	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-3.19	N	0.55	T	-0.928	T	0.000	T	0.053	-0.588	1.365	3.98	0.675	2.620	10.364	-0.587682	NA	1	0.776744	0.67635	NA	0.609	NA	10.0175894
651	4	40119501	40119501	T	C	exonic	N4BP2	NA	synonymous SNV	N4BP2:NM_018177:exon8:c.T1677C:p.H559H	exonic	ENSG00000078177	NA	synonymous SNV	ENSG00000078177:ENST00000261435:exon8:c.T1677C:p.H559H	Score=573;Name=lod=284	NA	4p14	Score=829;Name=V$FREAC3_01	NA	NA	NA	rs1128372	0.13	0.13	0.09	0.113618	0.2207	0.0208	0.255	0.0106	0.138	0.23	0.02	0.27	0.01	0.2006	0.27	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.122	T	0.000	T	.	0.193	5.04	4.11	0.322	2.177	12.694	0.193016	NA	NA	0.230465	0.04857	NA	0.058	NA	10.0149016
651	6	32362703	32362703	G	T	exonic	BTNL2	NA	nonsynonymous SNV	BTNL2:NM_019602:exon6:c.C1178A:p.P393Q	exonic	ENSG00000204290	NA	nonsynonymous SNV	ENSG00000204290:ENST00000414363:exon4:c.C548A:p.P183Q,ENSG00000204290:ENST00000540315:exon4:c.C548A:p.P183Q,ENSG00000204290:ENST00000544175:exon5:c.C347A:p.P116Q,ENSG00000204290:ENST00000374993:exon6:c.C1178A:p.P393Q,ENSG00000204290:ENST00000374995:exon6:c.C896A:p.P299Q,ENSG00000204290:ENST00000454136:exon6:c.C1178A:p.P393Q	NA	NA	6p21.32	Score=941;Name=V$NMYC_01	NA	NA	NA	rs41521946	0.12	0.12	NA	0.163938	0.163	0.1587	0.1599	0.1422	0.2025	0.11	0.15	0.15	0.09	0.1547	0.15	1	T	0.0	B	0.001	B	0.066	N	1.000	P	-2.925	N	-0.79	T	-0.975	T	0.016	T	0.159	-2.27	0.004	2.67	0.971	0.414	4.221	-2.270351	NA	0.53	0.00186	0.002497	NA	NA	NA	10.0137734
651	15	100269635	100269635	G	C	exonic	LYSMD4	NA	nonsynonymous SNV	LYSMD4:NM_152449:exon6:c.C587G:p.T196S	exonic	ENSG00000183060	NA	nonsynonymous SNV	ENSG00000183060:ENST00000409796:exon3:c.C584G:p.T195S,ENSG00000183060:ENST00000332728:exon4:c.C584G:p.T195S,ENSG00000183060:ENST00000545021:exon4:c.C206G:p.T69S,ENSG00000183060:ENST00000344791:exon6:c.C587G:p.T196S	NA	NA	15q26.3	NA	NA	NA	NA	rs72760587	0.13	0.13	0.105	0.148363	0.1093	0.2054	0.2363	0.1059	0.1247	0.11	0.18	0.18	0.08	0.114	0.18	0.48	T	0.063	B	0.037	B	0.375	N	1.000	P	1.415	L	2.0	T	-1.022	T	0.000	T	0.058	0.026	4.146	4.2	1.129	4.356	11.926	0.02552	NA	0.5	0.098488	0.108942	ID=COSM147991;OCCURENCE=1(stomach)	0.13	NA	10.0115454
651	11	124006972	124006972	G	T	exonic	VWA5A	NA	nonsynonymous SNV	VWA5A:NM_014622:exon12:c.G1496T:p.S499I,VWA5A:NM_001130142:exon13:c.G1496T:p.S499I	exonic	ENSG00000110002	NA	nonsynonymous SNV	ENSG00000110002:ENST00000392748:exon12:c.G1496T:p.S499I,ENSG00000110002:ENST00000456829:exon13:c.G1496T:p.S499I	Score=340;Name=lod=32	NA	11q24.2	NA	NA	NA	NA	rs2276054	0.11	0.11	0.124	0.122204	0.1014	0.0585	0.0764	0.1952	0.1431	0.11	0.05	0.1	0.2	0.1147	0.2	0.87	T	0.0	B	0.0	B	0.344	N	0.000	P	-1.725	N	3.99	T	-0.977	T	0.000	T	0.051	-0.462	1.862	5.35	0.868	3.428	10.829	-0.462433	NA	1	0.107118	0.170831	NA	0.181	NA	10.0101154
651	3	53700550	53700550	T	C	exonic	CACNA1D	NA	synonymous SNV	CACNA1D:NM_000720:exon7:c.T1104C:p.D368D,CACNA1D:NM_001128839:exon7:c.T1104C:p.D368D,CACNA1D:NM_001128840:exon7:c.T1104C:p.D368D	exonic	ENSG00000157388	NA	synonymous SNV	ENSG00000157388:ENST00000481478:exon1:c.T123C:p.D41D,ENSG00000157388:ENST00000288139:exon7:c.T1104C:p.D368D,ENSG00000157388:ENST00000350061:exon7:c.T1104C:p.D368D,ENSG00000157388:ENST00000422281:exon7:c.T1104C:p.D368D	Score=663;Name=lod=657	NA	3p21.1	Score=884;Name=V$TAL1ALPHAE47_01	NA	NA	NA	rs2250736	0.66	0.66	0.684	0.70647	0.5298	0.6548	0.6081	0.9304	0.7086	0.52	0.66	0.58	0.91	0.5945	0.91	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.106	T	0.000	T	.	-0.494	1.733	-7.67	-1.886	-1.895	16.490	-0.493554	NA	NA	0.533488	0.86995	NA	0.768	NA	10.0088786
651	16	624114	624114	A	G	exonic	PIGQ	NA	nonsynonymous SNV	PIGQ:NM_004204:exon2:c.A40G:p.T14A,PIGQ:NM_148920:exon2:c.A40G:p.T14A	exonic	ENSG00000007541	NA	nonsynonymous SNV	ENSG00000007541:ENST00000026218:exon2:c.A40G:p.T14A,ENSG00000007541:ENST00000321878:exon2:c.A40G:p.T14A,ENSG00000007541:ENST00000409439:exon2:c.A40G:p.T14A,ENSG00000007541:ENST00000422307:exon2:c.A40G:p.T14A,ENSG00000007541:ENST00000443147:exon2:c.A82G:p.T28A,ENSG00000007541:ENST00000470411:exon2:c.A40G:p.T14A,ENSG00000007541:ENST00000293874:exon3:c.A40G:p.T14A,ENSG00000007541:ENST00000409527:exon3:c.A40G:p.T14A,ENSG00000007541:ENST00000439574:exon3:c.A40G:p.T14A	NA	NA	16p13.3	Score=770;Name=V$TCF11MAFG_01	NA	NA	NA	rs2071979	0.52	0.52	0.468	0.531949	0.4264	0.6359	0.4914	0.4871	0.6227	0.45	0.63	0.5	0.52	0.4908	0.63	0.75	T	0.001	B	0.0	B	0.000	N	1.000	P	-1.955	N	2.65	T	-0.968	T	0.000	T	0.159	-0.532	1.577	5.17	1.192	7.784	13.025	-0.532487	NA	1	0.407791	0.478646	NA	0.37	NA	10.0083424
651	3	10311939	10311939	C	T	exonic	TATDN2	NA	nonsynonymous SNV	TATDN2:NM_014760:exon4:c.C1073T:p.P358L	exonic	ENSG00000157014,ENSG00000272410	NA	nonsynonymous SNV	ENSG00000272410:ENST00000437082:exon3:c.C902T:p.P301L,ENSG00000157014:ENST00000287652:exon4:c.C1073T:p.P358L,ENSG00000157014:ENST00000448281:exon4:c.C1073T:p.P358L	Score=265;Name=lod=16	NA	3p25.3	NA	NA	NA	NA	rs2075352	0.18	0.18	0.181	0.179313	0.1044	0.2768	0.0778	0.2625	0.1155	0.1	0.28	0.08	0.27	0.1253	0.28	0.14	T	0.154	B	0.006	B	0.367	N	0.876	P	1.61	L	0.86	T	-1.070	T	0.000	T	0.082	0.371	6.013	4.73	2.353	0.912	10.845	0.370799	NA	0.15	0.095698	0.245801	NA	0.203	NA	10.0079354
651	1	24421474	24421474	G	A	exonic	MYOM3	NA	nonsynonymous SNV	MYOM3:NM_152372:exon9:c.C797T:p.T266M	exonic	ENSG00000142661	NA	nonsynonymous SNV	ENSG00000142661:ENST00000329601:exon9:c.C797T:p.T266M,ENSG00000142661:ENST00000330966:exon9:c.C800T:p.T267M,ENSG00000142661:ENST00000374434:exon9:c.C797T:p.T266M	NA	NA	1p36.11	Score=740;Name=V$MEF2_04	Name=CTCF	NA	NA	rs6678540	0.38	0.38	0.354	0.319888	0.4771	0.3383	0.2911	0.2746	0.2209	0.51	0.31	0.32	0.29	0.3942	0.51	0.62	T	0.002	B	0.004	B	0.125	N	1.000	P	-0.69	N	0.53	T	-0.919	T	0.000	T	0.079	0.661	7.54	4.06	0.810	2.024	7.292	0.660523	NA	0.22	0.454954	0.271711	NA	0.217	NA	10.0070794
651	13	113530199	113530199	G	A	exonic	ATP11A	NA	nonsynonymous SNV	ATP11A:NM_015205:exon28:c.G3271A:p.V1091I,ATP11A:NM_032189:exon28:c.G3271A:p.V1091I	exonic	ENSG00000068650	NA	nonsynonymous SNV	ENSG00000068650:ENST00000415301:exon1:c.G77A:p.R26H,ENSG00000068650:ENST00000419631:exon3:c.G247A:p.V83I,ENSG00000068650:ENST00000283558:exon28:c.G3271A:p.V1091I,ENSG00000068650:ENST00000375630:exon28:c.G3271A:p.V1091I,ENSG00000068650:ENST00000375645:exon28:c.G3271A:p.V1091I,ENSG00000068650:ENST00000487903:exon28:c.G3271A:p.V1091I	Score=541;Name=lod=211	NA	13q34	NA	NA	NA	NA	rs11616795	0.08	0.08	0.06	0.0820687	0.1272	0.0853	0.098	0.0129	0.1145	0.1	0.07	0.1	0.02	0.0933	0.11	0.53	T	0.0	B	0.002	B	0.000	D	0.001	P	0.735	N	0.29	T	-1.064	T	0.003	T	0.186	0.711	7.79	1.59	0.446	4.185	10.924	0.711346	NA	0.22	0.106047	0.024285	NA	0.043	NA	10.0067864
651	4	152682046	152682046	G	T	exonic	PET112	NA	nonsynonymous SNV	PET112:NM_004564:exon1:c.C89A:p.A30D	exonic	ENSG00000059691	NA	nonsynonymous SNV	ENSG00000059691:ENST00000263985:exon1:c.C89A:p.A30D,ENSG00000059691:ENST00000508611:exon1:c.C89A:p.A30D,ENSG00000059691:ENST00000511538:exon1:c.C77A:p.A26D,ENSG00000059691:ENST00000512306:exon1:c.C89A:p.A30D,ENSG00000059691:ENST00000515812:exon1:c.C89A:p.A30D	NA	NA	4q31.3	NA	Name=Pol2,Mxi1_(bHLH),NRSF,YY1,YY1_(C-20),Sin3Ak-20,TAF7_(SQ-8),KAP1,Pol2-4H8,ERalpha_a,USF1_(SC-8983),Pol2(b),TAF1,eGFP-JunB,ETS1,MafK_(SC-477),POU2F2,p300,USF-1,TBP,Max,c-Myc,HEY1,NFKB,Oct-2	NA	NA	rs11556167	0.12	0.12	0.117	0.128195	0.1044	0.122	0.0807	0.2511	0.0266	0.11	0.09	0.07	0.21	0.1087	0.23	0.01	D	0.18	B	0.055	B	0.901	N	1.000	P	0.55	N	0.88	T	-1.046	T	0.000	T	0.285	1.987	12.6	2.35	0.776	0.241	6.125	1.986626	1.986626	0.08	0.113488	0.231956	NA	0.145	NA	10.0067454
651	18	43262359	43262359	G	A	exonic	SLC14A2	NA	nonsynonymous SNV	SLC14A2:NM_007163:exon20:c.G2638A:p.A880T,SLC14A2:NM_001242692:exon21:c.G2638A:p.A880T	exonic	ENSG00000132874	NA	nonsynonymous SNV	ENSG00000132874:ENST00000589658:exon9:c.G1069A:p.A357T,ENSG00000132874:ENST00000255226:exon20:c.G2638A:p.A880T,ENSG00000132874:ENST00000586448:exon21:c.G2638A:p.A880T	Score=436;Name=lod=79	NA	18q12.3	NA	NA	NA	NA	rs3745009	0.4	0.4	0.388	0.427716	0.4404	0.3869	0.3761	0.4024	0.5276	0.44	0.39	0.35	0.4	0.4362	0.45	0.38	T	0.017	B	0.024	B	0.001	N	0.000	P	1.53	L	0.72	T	-0.940	T	0.000	T	0.149	2.767	15.21	5.14	2.390	1.970	18.217	2.766981	2.766981	0.48	0.45	0.390377	ID=COSM1130064;OCCURENCE=2(prostate)	0.297	NA	10.0067334
651	10	13214753	13214753	G	C	exonic	MCM10	NA	nonsynonymous SNV	MCM10:NM_018518:exon5:c.G580C:p.A194P,MCM10:NM_182751:exon5:c.G583C:p.A195P	exonic	ENSG00000065328	NA	nonsynonymous SNV	ENSG00000065328:ENST00000378694:exon4:c.G580C:p.A194P,ENSG00000065328:ENST00000378714:exon5:c.G580C:p.A194P,ENSG00000065328:ENST00000484800:exon5:c.G583C:p.A195P	NA	NA	10p13	NA	NA	NA	NA	rs34630110	0.06	0.06	0.051	0.0411342	0.1163	0.0149	0.0447	0.0166	0.0215	0.12	0.02	0.06	0.02	0.0924	0.12	0.3	T	0.0	B	0.001	B	0.983	N	1.000	P	0.69	N	2.5	T	-0.951	T	0.000	T	0.032	1.317	10.32	-6.07	-1.167	-1.322	7.314	1.317398	1.317398	0.23	0.119419	0.040172	NA	0.101	NA	10.0052144
652	4	71114956	71114956	G	T	exonic	CSN3	NA	nonsynonymous SNV	CSN3:NM_005212:exon4:c.G329T:p.R110L	exonic	ENSG00000171209	NA	nonsynonymous SNV	ENSG00000171209:ENST00000304954:exon4:c.G329T:p.R110L	NA	NA	4q13.3	NA	NA	NA	NA	rs1048152	0.15	0.15	0.147	0.139776	0.1074	0.2183	0.1671	0.0983	0.1288	0.11	0.24	0.16	0.12	0.1296	0.24	0.02	D	0.086	B	0.07	B	0.195	N	1.000	P	1.75	L	1.83	T	-0.977	T	0.000	T	0.087	1.532	11.08	-5.34	-0.757	-2.249	1.091	1.532121	1.532121	0.03	0.09186	0.087835	ID=COSM149686;OCCURENCE=1(stomach),1(prostate)	0.188	NA	10.0044734
652	5	140763029	140763029	A	G	exonic	PCDHGA7	NA	nonsynonymous SNV	PCDHGA7:NM_018920:exon1:c.A563G:p.E188G,PCDHGA7:NM_032087:exon1:c.A563G:p.E188G	exonic	ENSG00000253537	NA	nonsynonymous SNV	ENSG00000253537:ENST00000518325:exon1:c.A563G:p.E188G	Score=309;Name=lod=24	NA	5q31.3	NA	NA	NA	NA	rs2072315	0.52	0.52	0.512	0.543131	0.4225	0.3264	0.6254	0.8495	0.4182	0.45	0.33	0.6	0.81	0.4771	0.81	1	T	0.0	B	0.0	B	.	.	0.000	P	-3.27	N	2.14	T	-0.962	T	0.000	T	0.085	-0.733	0.867	4.23	1.290	1.416	12.470	-0.733271	NA	NA	0.430402	0.808526	NA	0.558	NA	10.0033314
652	7	44610376	44610376	G	A	exonic	DDX56	NA	stopgain	DDX56:NM_019082:exon7:c.C991T:p.R331X	exonic	ENSG00000136271	NA	stopgain	ENSG00000136271:ENST00000258772:exon7:c.C991T:p.R331X,ENSG00000136271:ENST00000421223:exon7:c.C991T:p.R331X	NA	NA	7p13	Score=730;Name=V$PPARG_01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000008267	NA	0.36	T	.	.	.	.	0.176	N	1.000	N	.	.	.	.	.	.	.	.	.	14.196	48	1.5	0.256	0.874	13.216	14.195918	14.195918	0.51	NA	NA	NA	NA	NA	9.9999917
652	1	34330067	34330067	A	C	exonic	HMGB4	NA	nonsynonymous SNV	HMGB4:NM_145205:exon2:c.A275C:p.E92A	exonic	ENSG00000176256	NA	nonsynonymous SNV	ENSG00000176256:ENST00000519684:exon2:c.A275C:p.E92A,ENSG00000176256:ENST00000522796:exon4:c.A275C:p.E92A	Score=378;Name=lod=46	NA	1p35.1	NA	NA	NA	NA	rs10379	0.86	0.86	0.857	0.901158	0.7475	0.9008	0.9063	0.9917	0.9335	0.74	0.91	0.89	0.99	0.8262	0.99	1	T	0.0	B	0.0	B	0.000	N	0.000	P	-2.535	N	-3.15	D	-0.930	T	0.000	T	0.063	0.863	8.494	5.58	1.614	3.889	11.928	0.862633	NA	NA	0.759884	0.946664	NA	0.949	NA	9.9997494
652	6	16290761	16290761	T	A	exonic	GMPR	NA	nonsynonymous SNV	GMPR:NM_006877:exon8:c.T766A:p.F256I	exonic	ENSG00000137198	NA	nonsynonymous SNV	ENSG00000137198:ENST00000259727:exon8:c.T766A:p.F256I	Score=361;Name=lod=39	NA	6p22.3	NA	NA	NA	NA	rs1042391	0.65	0.65	0.657	0.70627	0.3986	0.874	0.5576	0.8835	0.7157	0.39	0.88	0.54	0.85	0.5444	0.88	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-1.83	N	-1.05	T	-1.067	T	0.040	T	0.152	-0.274	2.686	5.22	0.810	4.307	11.563	-0.274157	NA	1	0.391395	0.822288	NA	0.645	CLINSIG=non-pathogenic;CLNDBN=GMP_REDUCTASE_POLYMORPHISM;CLNREVSTAT=single;CLNACC=RCV000017331.1;CLNDSDB=.;CLNDSDBID=.	9.9989384
652	14	45665468	45665468	C	G	exonic	FANCM	NA	nonsynonymous SNV	FANCM:NM_020937:exon21:c.C5434G:p.P1812A	exonic	ENSG00000187790	NA	nonsynonymous SNV	ENSG00000187790:ENST00000557110:exon1:c.C94G:p.P32A,ENSG00000187790:ENST00000556250:exon14:c.C3982G:p.P1328A,ENSG00000187790:ENST00000542564:exon20:c.C5356G:p.P1786A,ENSG00000187790:ENST00000267430:exon21:c.C5434G:p.P1812A	NA	NA	14q21.2	NA	NA	NA	NA	rs3736772	0.09	0.09	0.084	0.10623	0.1143	0.119	0.1081	0.0068	0.2178	0.13	0.12	0.09	0.01	0.1158	0.13	0.12	T	0.003	B	0.005	B	0.104	N	1.000	P	0.895	L	2.56	T	-1.051	T	0.002	T	0.216	0.998	9.077	3.29	1.186	1.240	14.452	0.998283	NA	0.24	0.105814	0.023377	NA	0.109	NA	9.9974194
653	3	172835082	172835082	C	T	exonic	SPATA16	NA	nonsynonymous SNV	SPATA16:NM_031955:exon2:c.G440A:p.G147E	exonic	ENSG00000144962	NA	nonsynonymous SNV	ENSG00000144962:ENST00000351008:exon2:c.G440A:p.G147E	NA	NA	3q26.31	NA	NA	NA	NA	rs16846616	0.15	0.15	0.132	0.136981	0.0944	0.3065	0.1686	0.0242	0.136	0.09	0.34	0.15	0.03	0.1287	0.34	0.02	D	0.002	B	0.007	B	0.008	N	1.000	P	0.805	L	1.52	T	-0.982	T	0.000	T	0.113	1.551	11.14	4.39	1.342	0.279	11.282	1.551399	1.551399	0.02	0.117093	0.045847	NA	0.138	NA	9.9931404
653	21	34897113	34897113	C	T	exonic	GART	NA	nonsynonymous SNV	GART:NM_000819:exon11:c.G1261A:p.V421I,GART:NM_001136005:exon11:c.G1261A:p.V421I,GART:NM_001136006:exon11:c.G1261A:p.V421I,GART:NM_175085:exon11:c.G1261A:p.V421I	exonic	ENSG00000159131	NA	nonsynonymous SNV	ENSG00000159131:ENST00000361093:exon11:c.G1261A:p.V421I,ENSG00000159131:ENST00000381815:exon11:c.G1261A:p.V421I,ENSG00000159131:ENST00000381831:exon11:c.G1261A:p.V421I,ENSG00000159131:ENST00000381839:exon11:c.G1261A:p.V421I	Score=449;Name=lod=89	NA	21q22.11	Score=837;Name=V$AHRARNT_01	NA	NA	NA	rs8788	0.87	0.87	0.85	0.874201	0.7753	0.9831	0.8703	0.9191	0.8057	0.77	0.99	0.87	0.9	0.808	0.99	1	T	0.0	B	0.001	B	0.000	N	0.000	P	-3.51	N	2.14	T	-0.949	T	0.000	T	0.051	-0.007	3.979	6.03	1.107	5.789	12.349	-0.006732	NA	1	0.760581	0.901725	NA	0.877	NA	9.9894524
653	21	34640788	34640788	A	G	exonic	IL10RB	NA	nonsynonymous SNV	IL10RB:NM_000628:exon2:c.A139G:p.K47E	exonic	ENSG00000243646,ENSG00000249624	NA	nonsynonymous SNV	ENSG00000243646:ENST00000290200:exon2:c.A139G:p.K47E,ENSG00000243646:ENST00000422891:exon2:c.A139G:p.K47E	NA	NA	21q22.11	NA	NA	NA	NA	rs2834167	0.35	0.35	0.276	0.339457	0.2684	0.5635	0.5014	0.0855	0.41	0.28	0.56	0.48	0.1	0.3189	0.56	0.34	T	0.583	P	0.284	B	0.039	N	1.000	P	1.5	L	-0.69	T	-0.866	T	0.000	T	0.327	2.927	15.76	2.61	2.021	0.790	5.676	2.927466	2.927466	0.06	0.257442	0.130731	NA	0.159	CLINSIG=other;CLNDBN=Hepatitis_b_virus\x2c_susceptibility_to;CLNREVSTAT=single;CLNACC=RCV000018431.1;CLNDSDB=MedGen:OMIM;CLNDSDBID=C1864880:610424	9.9885914
653	2	54587596	54587596	C	T	exonic	C2orf73	NA	nonsynonymous SNV	C2orf73:NM_001100396:exon5:c.C761T:p.P254L	exonic	ENSG00000177994	NA	nonsynonymous SNV	ENSG00000177994:ENST00000398634:exon5:c.C761T:p.P254L,ENSG00000177994:ENST00000447328:exon5:c.C587T:p.P196L	NA	NA	2p16.2	NA	Name=Rad21,c-Jun,GATA-2,KAP1	Name=103	NA	rs2280718	0.73	0.73	0.709	0.676717	0.7903	0.6429	0.7522	0.6445	0.5849	0.8	0.69	0.74	0.65	0.7586	0.8	.	.	0.385	B	0.161	B	0.001	D	0.086	P	1.7	L	-0.48	T	-0.977	T	0.000	T	0.112	3.865	19.64	3.18	0.584	1.105	8.302	3.864774	3.864774	0.51	0.796435	0.685166	NA	0.667	NA	9.9879984
653	19	44983567	44983567	C	G	exonic	ZNF180	NA	nonsynonymous SNV	ZNF180:NM_013256:exon4:c.G267C:p.W89C	exonic	ENSG00000167384	NA	nonsynonymous SNV	ENSG00000167384:ENST00000391956:exon3:c.G192C:p.W64C,ENSG00000167384:ENST00000221327:exon4:c.G267C:p.W89C,ENSG00000167384:ENST00000591064:exon4:c.G186C:p.W62C,ENSG00000167384:ENST00000592529:exon4:c.G186C:p.W62C,ENSG00000167384:ENST00000586637:exon5:c.G295C:p.E99Q	NA	NA	19q13.31	NA	NA	NA	NA	rs2253563	0.48	0.48	0.481	0.453874	0.4672	0.4395	0.3242	0.6498	0.2822	0.46	0.48	0.35	0.59	0.4347	0.62	0.01	D	0.945	P	0.669	P	0.269	N	0.000	P	0.69	N	4.66	T	-1.097	T	0.000	T	0.134	2.922	15.74	4.99	2.458	0.896	16.145	2.921938	2.921938	0.04	0.443953	0.61961	NA	0.551	NA	9.9874804
653	12	125448960	125448960	C	T	exonic	DHX37	NA	synonymous SNV	DHX37:NM_032656:exon15:c.G2025A:p.T675T	exonic	ENSG00000150990	NA	nonsynonymous SNV	ENSG00000150990:ENST00000543962:exon4:c.G380A:p.R127Q	NA	NA	12q24.31	NA	NA	NA	NA	rs4076777	0.41	0.41	0.401	0.365216	0.33	0.6448	0.3386	0.2088	0.3436	0.33	0.68	0.37	0.23	0.3551	0.68	0	D	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.969	T	0.000	T	.	1.783	11.92	-3.66	-1.499	-2.742	2.548	1.782963	1.782963	NA	0.328837	0.214707	NA	0.362	NA	9.986063
654	22	50502491	50502491	T	C	exonic	MLC1	NA	nonsynonymous SNV	MLC1:NM_015166:exon11:c.A1031G:p.N344S,MLC1:NM_139202:exon11:c.A1031G:p.N344S	exonic	ENSG00000100427	NA	nonsynonymous SNV	ENSG00000100427:ENST00000450140:exon9:c.A875G:p.N292S,ENSG00000100427:ENST00000431262:exon10:c.A941G:p.N314S,ENSG00000100427:ENST00000535444:exon10:c.A794G:p.N265S,ENSG00000100427:ENST00000538737:exon10:c.A929G:p.N310S,ENSG00000100427:ENST00000311597:exon11:c.A1031G:p.N344S,ENSG00000100427:ENST00000395876:exon11:c.A1031G:p.N344S	NA	NA	22q13.33	Score=776;Name=V$HEN1_01	NA	NA	NA	rs11568188	0.11	0.11	0.075	0.13119	0.1312	0.0923	0.1758	0.059	0.2372	0.12	0.09	0.16	0.08	0.0907	0.16	0.81	T	0.0	B	0.002	B	0.345	N	1.000	P	-0.69	N	-1.99	D	-0.997	T	0.001	T	0.038	-0.756	0.798	1.67	0.357	0.621	2.066	-0.75638	NA	0.82	0.127209	0.066303	ID=COSM1416980;OCCURENCE=2(large_intestine)	0.022	CLINSIG=non-pathogenic|probable-non-pathogenic;CLNDBN=Megalencephalic_leukoencephalopathy_with_subcortical_cysts_1|not_specified;CLNREVSTAT=single|single;CLNACC=RCV000020711.2|RCV000117622.2;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet|.;CLNDSDBID=NBK1535:C1858854:604004:ORPHA2478|.	9.9842244
654	1	152281304	152281304	A	C	exonic	FLG	NA	nonsynonymous SNV	FLG:NM_002016:exon3:c.T6058G:p.S2020A	exonic	ENSG00000143631	NA	nonsynonymous SNV	ENSG00000143631:ENST00000368799:exon3:c.T6058G:p.S2020A	NA	NA	1q21.3	NA	NA	NA	NA	rs7512857	NA	NA	0.202	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2186	0.33	0.21	T	0.998	D	0.929	D	.	.	1.000	N	2.095	M	3.05	T	-1.046	T	0.020	T	0.037	0.428	6.327	1.13	0.103	0.391	2.886	0.428418	NA	0.37	0.132907	0.326827	NA	0.007	NA	9.9818264
654	20	14306953	14306953	G	T	exonic	FLRT3	NA	nonsynonymous SNV	FLRT3:NM_013281:exon2:c.C1200A:p.H400Q,FLRT3:NM_198391:exon3:c.C1200A:p.H400Q	exonic	ENSG00000125848	NA	nonsynonymous SNV	ENSG00000125848:ENST00000378053:exon2:c.C1200A:p.H400Q,ENSG00000125848:ENST00000341420:exon3:c.C1200A:p.H400Q	Score=701;Name=lod=938	NA	20p12.1	Score=832;Name=V$BRN2_01	NA	Name=3	NA	rs6079391	0.31	0.31	0.282	0.260783	0.4652	0.1597	0.4107	0.1543	0.1922	0.48	0.14	0.41	0.16	0.4062	0.48	0.3	T	0.0	B	0.0	B	0.020	N	0.000	P	0	N	0.37	T	-0.913	T	0.000	T	0.015	-0.051	3.751	1.58	0.899	1.833	4.333	-0.051493	NA	0.32	0.481512	0.21153	ID=COSM1410455;OCCURENCE=1(large_intestine)	0.399	NA	9.9804214
654	1	152281039	152281039	G	A	exonic	FLG	NA	nonsynonymous SNV	FLG:NM_002016:exon3:c.C6323T:p.A2108V	exonic	ENSG00000143631	NA	nonsynonymous SNV	ENSG00000143631:ENST00000368799:exon3:c.C6323T:p.A2108V	NA	NA	1q21.3	NA	NA	NA	NA	rs7522925	0.29	0.29	0.264	NA	NA	NA	NA	NA	NA	0.13	0.42	0.3	0.38	0.2208	0.42	0.3	T	0.324	B	0.021	B	.	.	1.000	N	0.895	L	4.67	T	-0.931	T	0.001	T	0.011	0.454	6.463	-6.74	-1.346	-3.796	6.099	0.453669	NA	0.14	0.13407	0.356786	NA	0.058	NA	9.9784634
654	2	239040218	239040218	G	A	exonic	ESPNL	NA	nonsynonymous SNV	ESPNL:NM_194312:exon9:c.G2863A:p.A955T	exonic	ENSG00000144488	NA	nonsynonymous SNV	ENSG00000144488:ENST00000409506:exon4:c.G1759A:p.A587T,ENSG00000144488:ENST00000409169:exon8:c.G2731A:p.A911T,ENSG00000144488:ENST00000343063:exon9:c.G2863A:p.A955T	NA	NA	2q37.3	NA	NA	NA	NA	rs73102309	0.12	0.12	0.136	0.133786	0.1173	0.0546	0.0908	0.2368	0.1237	0.11	0.07	0.1	0.19	0.121	0.21	0.54	T	0.001	B	0.002	B	0.612	N	1.000	P	0.55	N	1.04	T	-1.043	T	0.000	T	0.138	0.201	5.082	-8.28	-1.336	-1.492	0.427	0.200731	NA	0.38	0.117613	0.209891	NA	0.094	NA	9.9774204
655	8	27308585	27308585	A	C	exonic	PTK2B	NA	nonsynonymous SNV	PTK2B:NM_173175:exon25:c.A2387C:p.K796T,PTK2B:NM_173176:exon26:c.A2513C:p.K838T,PTK2B:NM_004103:exon27:c.A2513C:p.K838T,PTK2B:NM_173174:exon31:c.A2513C:p.K838T	exonic	ENSG00000120899	NA	nonsynonymous SNV	ENSG00000120899:ENST00000397497:exon17:c.A1625C:p.K542T,ENSG00000120899:ENST00000517339:exon24:c.A2387C:p.K796T,ENSG00000120899:ENST00000420218:exon25:c.A2387C:p.K796T,ENSG00000120899:ENST00000346049:exon26:c.A2513C:p.K838T,ENSG00000120899:ENST00000338238:exon30:c.A2387C:p.K796T,ENSG00000120899:ENST00000544172:exon30:c.A2513C:p.K838T,ENSG00000120899:ENST00000397501:exon31:c.A2513C:p.K838T	Score=487;Name=lod=127	NA	8p21.2	Score=905;Name=V$GATA_C	NA	NA	NA	rs751019	0.38	0.38	0.346	0.364617	0.4573	0.3601	0.4092	0.2413	0.409	0.45	0.34	0.44	0.26	0.437	0.46	0.27	T	0.014	B	0.003	B	0.016	N	0.333	P	0.145	N	-0.8	T	-0.955	T	0.000	T	0.219	0.861	8.485	4.26	0.890	3.193	8.073	0.860694	NA	0.09	0.464535	0.281207	NA	0.319	NA	9.9744984
655	6	12125772	12125772	A	G	exonic	HIVEP1	NA	nonsynonymous SNV	HIVEP1:NM_002114:exon4:c.A5744G:p.Q1915R	exonic	ENSG00000095951	NA	nonsynonymous SNV	ENSG00000095951:ENST00000379388:exon4:c.A5744G:p.Q1915R	NA	NA	6p24.1	NA	NA	NA	NA	rs1126472	0.15	0.15	0.142	0.170128	0.1362	0.131	0.1282	0.2352	0.1871	0.13	0.11	0.15	0.23	0.1235	0.23	.	.	0.022	B	0.01	B	.	.	1.000	P	0	N	3.05	T	-0.907	T	0.002	T	0.013	-2.199	0.005	-6.62	-1.569	-3.171	1.272	-2.198926	NA	0.54	0.100049	0.205148	NA	0.217	NA	9.9735844
655	22	50301476	50301476	T	C	exonic	ALG12	NA	synonymous SNV	ALG12:NM_024105:exon7:c.A885G:p.A295A	exonic	ENSG00000182858	NA	synonymous SNV	ENSG00000182858:ENST00000330817:exon7:c.A885G:p.A295A	NA	NA	22q13.33	NA	NA	NA	NA	rs8135963	0.35	0.35	0.381	0.402157	0.2097	0.1806	0.1902	0.8253	0.407	0.22	0.19	0.2	0.83	0.2704	0.83	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-1.046	T	0.000	T	.	-0.937	0.366	-9.6	-3.134	-5.665	1.883	-0.936583	NA	NA	0.215116	0.711757	ID=COSM445148;OCCURENCE=1(breast)	0.478	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000082168.1;CLNDSDB=.;CLNDSDBID=.	9.9714506
655	22	50297435	50297435	T	C	UTR3	ALG12	NM_024105:c.*51A>G	NA	NA	exonic	ENSG00000182858	NA	unknown	UNKNOWN	NA	NA	22q13.33	NA	Name=GATA-2	Name=5	NA	rs1321	0.34	0.34	0.373	0.402157	0.2097	0.1796	0.1873	0.8253	0.41	0.22	0.19	0.2	0.83	0.2749	0.83	0	D	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.976	T	0.000	T	.	-0.578	1.402	-4.75	-3.054	-0.767	1.057	-0.577915	NA	NA	0.213754	0.7082	NA	0.478	NA	9.9683127
656	7	34818113	34818113	A	T	exonic	NPSR1	NA	nonsynonymous SNV	NPSR1:NM_207172:exon3:c.A320T:p.N107I,NPSR1:NM_207173:exon3:c.A320T:p.N107I	exonic	ENSG00000187258	NA	nonsynonymous SNV	ENSG00000187258:ENST00000359791:exon3:c.A320T:p.N107I,ENSG00000187258:ENST00000360581:exon3:c.A320T:p.N107I,ENSG00000187258:ENST00000381539:exon3:c.A320T:p.N107I,ENSG00000187258:ENST00000381553:exon3:c.A320T:p.N107I,ENSG00000187258:ENST00000396095:exon3:c.A320T:p.N107I,ENSG00000187258:ENST00000531252:exon3:c.A287T:p.N96I	NA	NA	7p14.3	Score=858;Name=V$FOXJ2_02	NA	NA	NA	rs324981	0.48	0.48	0.485	0.467452	0.4622	0.5288	0.4092	0.559	0.3272	0.46	0.52	0.45	0.49	0.4465	0.55	1	T	0.0	B	0.0	B	0.000	N	0.035	P	-1.505	N	1.56	T	-0.940	T	0.000	T	0.289	-1.424	0.021	5.14	0.895	2.994	8.601	-1.424493	NA	1	0.460698	0.5463	NA	0.406	CLINSIG=other;CLNDBN=ASTHMA-RELATED_TRAITS\x2c_SUSCEPTIBILITY_TO\x2c_2;CLNREVSTAT=single;CLNACC=RCV000002276.1;CLNDSDB=MedGen:OMIM;CLNDSDBID=C1837811:608584	9.9639354
656	7	75053499	75053499	G	A	exonic	POM121C	NA	nonsynonymous SNV	POM121C:NM_001099415:exon12:c.C881T:p.S294L	exonic	ENSG00000135213	NA	nonsynonymous SNV	ENSG00000135213:ENST00000257665:exon10:c.C1607T:p.S536L,ENSG00000135213:ENST00000453279:exon12:c.C881T:p.S294L	NA	NA	7q11.23	NA	NA	NA	NA	rs113744930	0.12	0.12	0.115	0.15016	0.1183	0.002	0.098	0.3169	0.1472	0.1	0.0017	0.11	0.31	0.1272	0.31	0.03	D	0.013	B	0.01	B	0.170	N	1.000	P	2.175	M	3.62	T	-1.024	T	0.000	T	0.041	1.18	9.798	1.71	0.161	2.461	7.049	1.179694	NA	0.14	0.124767	0.260781	NA	0.188	NA	9.9630664
656	9	114454544	114454544	T	C	exonic	C9orf84	NA	nonsynonymous SNV	C9orf84:NM_001080551:exon23:c.A3404G:p.E1135G,C9orf84:NM_173521:exon25:c.A3521G:p.E1174G	exonic	ENSG00000165181	NA	nonsynonymous SNV	ENSG00000165181:ENST00000394777:exon22:c.A3299G:p.E1100G,ENSG00000165181:ENST00000394779:exon23:c.A3404G:p.E1135G,ENSG00000165181:ENST00000318737:exon25:c.A3521G:p.E1174G,ENSG00000165181:ENST00000374287:exon27:c.A3521G:p.E1174G	NA	NA	9q31.3	NA	NA	NA	NA	rs7869279	0.52	0.52	0.487	0.497005	0.4404	0.7728	0.5994	0.3911	0.3415	0.43	0.75	0.58	0.36	0.4843	0.75	0.06	T	0.893	P	0.563	P	0.374	N	0.001	P	0.895	L	3.38	T	-1.200	T	0.000	T	0.087	1.58	11.24	4.24	0.955	2.033	10.794	1.580204	1.580204	0.06	0.445814	0.412392	NA	0.464	NA	9.9628194
656	11	4944986	4944986	A	G	exonic	OR51G1	NA	nonsynonymous SNV	OR51G1:NM_001005237:exon1:c.T584C:p.I195T	exonic	ENSG00000176879	NA	nonsynonymous SNV	ENSG00000176879:ENST00000321961:exon1:c.T584C:p.I195T	NA	NA	11p15.4	Score=817;Name=V$PBX1_02	NA	NA	NA	rs12796015	0.07	0.07	0.058	0.048722	0.1441	NA	0.0937	0.0136	0.0164	0.14	NA	0.13	0.02	0.0942	0.14	0.35	T	0.0	B	0.002	B	0.172	U	1.000	P	-1.545	N	8.76	T	-1.053	T	0.000	T	0.017	-3.142	0.001	-3.28	-0.348	-3.126	2.789	-3.142373	NA	0.58	0.132969	0.036801	NA	0.123	NA	9.9620644
656	2	85628983	85628983	C	T	exonic	CAPG	NA	nonsynonymous SNV	CAPG:NM_001256139:exon3:c.G121A:p.V41I,CAPG:NM_001256140:exon3:c.G121A:p.V41I,CAPG:NM_001747:exon3:c.G121A:p.V41I	exonic	ENSG00000042493	NA	nonsynonymous SNV	ENSG00000042493:ENST00000263867:exon3:c.G121A:p.V41I,ENSG00000042493:ENST00000409275:exon3:c.G121A:p.V41I,ENSG00000042493:ENST00000409670:exon3:c.G121A:p.V41I,ENSG00000042493:ENST00000409724:exon3:c.G121A:p.V41I,ENSG00000042493:ENST00000409921:exon3:c.G121A:p.V41I,ENSG00000042493:ENST00000439385:exon3:c.G121A:p.V41I,ENSG00000042493:ENST00000449030:exon3:c.G121A:p.V41I,ENSG00000042493:ENST00000447219:exon4:c.G121A:p.V41I	NA	NA	2p11.2	NA	NA	NA	NA	rs2229668	0.1	0.1	0.096	0.0920527	0.1233	0.0764	0.0807	0.0832	0.0961	0.12	0.08	0.09	0.09	0.1083	0.14	0.22	T	0.0	B	0.0	B	0.859	N	1.000	P	0.025	N	0.56	T	-1.067	T	0.001	T	0.205	0.483	6.62	-9.84	-2.182	-5.140	17.044	0.482844	NA	0.25	0.141512	0.096913	NA	0.072	NA	9.9602214
657	2	220037444	220037444	G	A	exonic	CNPPD1	NA	nonsynonymous SNV	CNPPD1:NM_015680:exon8:c.C1097T:p.P366L	exonic	ENSG00000115649	NA	nonsynonymous SNV	ENSG00000115649:ENST00000360507:exon8:c.C1097T:p.P366L,ENSG00000115649:ENST00000409789:exon9:c.C1097T:p.P366L	NA	NA	2q35	NA	NA	NA	NA	rs17655123	0.11	0.11	0.095	0.0890575	0.1322	0.1597	0.1182	0.0144	0.0521	0.13	0.16	0.11	0.02	0.117	0.16	0.1	T	0.041	B	0.037	B	0.096	N	0.998	P	0.895	L	1.11	T	-1.100	T	0.000	T	0.229	1.435	10.74	5.04	2.609	2.773	15.233	1.434915	1.434915	0.01	0.130814	0.033818	NA	0.08	NA	9.9533194
657	4	187531022	187531022	A	G	exonic	FAT1	NA	nonsynonymous SNV	FAT1:NM_005245:exon15:c.T10001C:p.V3334A	exonic	ENSG00000083857	NA	nonsynonymous SNV	ENSG00000083857:ENST00000441802:exon15:c.T10001C:p.V3334A	Score=496;Name=lod=138	NA	4q35.2	NA	NA	NA	NA	rs28647489	0.22	0.22	0.21	0.192492	0.1103	0.3819	0.1902	0.1921	0.0838	0.11	0.4	0.2	0.19	0.1497	0.4	0.68	T	0.001	B	0.004	B	0.000	N	0.000	P	1.41	L	4.04	T	-0.930	T	0.000	T	0.082	0.105	4.568	2.77	0.443	3.445	7.055	0.105461	NA	0.3	0.120297	0.145042	ID=COSM1131161,COSM1131159;OCCURENCE=1(prostate)	0.167	NA	9.9530364
657	11	1775385	1775385	C	T	intronic	CTSD,MOB2	NA	NA	NA	exonic	ENSG00000117984	NA	nonsynonymous SNV	ENSG00000117984:ENST00000429746:exon2:c.G142A:p.A48T	NA	NA	11p15.5	NA	NA	Name=3	NA	rs78735768	0.05	0.05	0.039	0.0523163	0.0666	0.0377	0.0519	0.0182	0.0992	0.07	0.03	0.07	0.03	0.0787	0.07	.	.	.	.	.	.	.	.	1.000	N	.	.	0.37	T	-1.074	T	0.006	T	0.023	2.091	12.95	-5.59	-2.497	-2.211	0.098	2.090647	2.090647	0.02	0.069335	0.024807	NA	0.022	NA	9.9520317
657	17	39580562	39580562	T	C	exonic	KRT37	NA	nonsynonymous SNV	KRT37:NM_003770:exon1:c.A214G:p.T72A	exonic	ENSG00000108417	NA	nonsynonymous SNV	ENSG00000108417:ENST00000225550:exon1:c.A214G:p.T72A	Score=295;Name=lod=21	NA	17q21.2	NA	NA	NA	NA	rs9916484	0.37	0.37	0.309	0.391374	0.4592	0.4067	0.3415	0.1846	0.6207	0.45	0.4	0.4	0.21	0.4373	0.49	0.08	T	0.019	B	0.004	B	0.004	N	0.999	P	0.895	L	-1.47	T	-0.978	T	0.000	T	0.072	1.211	9.918	4.69	1.760	0.986	12.087	1.211427	NA	0.18	0.485465	0.223559	NA	0.348	NA	9.9513684
657	1	248343945	248343945	C	G	exonic	OR2M2	NA	nonsynonymous SNV	OR2M2:NM_001004688:exon1:c.C658G:p.R220G	exonic	ENSG00000198601	NA	nonsynonymous SNV	ENSG00000198601:ENST00000359682:exon1:c.C658G:p.R220G	NA	NA	1q44	NA	NA	NA	NA	rs4244171	0.51	0.51	0.453	0.574681	0.6382	0.4306	0.6037	0.6051	0.5961	0.58	0.38	0.56	0.51	0.6109	0.63	0.33	T	0.971	D	0.838	P	0.496	U	1.000	P	2.135	M	8.7	T	-1.041	T	0.000	T	0.078	0.525	6.844	-2.0	-0.160	-0.965	3.429	0.524908	NA	0.33	0.633054	0.58443	ID=COSM1178407;OCCURENCE=1(prostate)	0.58	NA	9.9511794
657	8	6302183	6302183	G	C	exonic	MCPH1	NA	nonsynonymous SNV	MCPH1:NM_001172575:exon7:c.G796C:p.D266H,MCPH1:NM_001172574:exon8:c.G940C:p.D314H,MCPH1:NM_024596:exon8:c.G940C:p.D314H	exonic	ENSG00000147316	NA	nonsynonymous SNV	ENSG00000147316:ENST00000522905:exon7:c.G796C:p.D266H,ENSG00000147316:ENST00000344683:exon8:c.G940C:p.D314H,ENSG00000147316:ENST00000519480:exon8:c.G940C:p.D314H	NA	NA	8p23.1	NA	NA	NA	NA	rs930557	0.68	0.68	0.629	0.644768	0.7982	0.7639	0.8256	0.2458	0.7751	0.82	0.78	0.83	0.25	0.7714	0.83	0.06	T	1.0	D	0.992	D	0.492	N	1.000	P	2.19	M	2.69	T	-1.055	T	0.000	T	0.166	1.759	11.84	2.68	0.345	0.311	8.507	1.759211	1.759211	0.11	0.814053	0.373603	NA	0.609	CLINSIG=non-pathogenic;CLNDBN=Primary_autosomal_recessive_microcephaly_1;CLNREVSTAT=single;CLNACC=RCV000020903.1;CLNDSDB=GeneReviews:MedGen:OMIM:OMIM:Orphanet;CLNDSDBID=NBK9587:C1855081:251200:606858:ORPHA2512	9.9496804
657	1	214820099	214820099	A	G	exonic	CENPF	NA	nonsynonymous SNV	CENPF:NM_016343:exon13:c.A7186G:p.N2396D	exonic	ENSG00000117724	NA	nonsynonymous SNV	ENSG00000117724:ENST00000366955:exon13:c.A7186G:p.N2396D	Score=309;Name=lod=24	NA	1q41	Score=806;Name=V$IRF7_01	NA	NA	NA	rs3748697	0.27	0.27	0.257	0.235024	0.4831	0.122	0.3127	0.0522	0.2883	0.47	0.11	0.35	0.07	0.3926	0.51	0.67	T	0.013	B	0.018	B	0.021	N	0.914	P	1.525	L	0.96	T	-0.916	T	0.000	T	0.007	-0.004	3.995	3.97	0.969	0.342	5.149	-0.003637	NA	NA	0.508837	0.118355	ID=COSM425281;OCCURENCE=1(breast)	0.333	NA	9.9487964
657	17	38121993	38121993	G	A	exonic	GSDMA	NA	nonsynonymous SNV	GSDMA:NM_178171:exon2:c.G53A:p.R18Q	exonic	ENSG00000167914	NA	nonsynonymous SNV	ENSG00000167914:ENST00000301659:exon2:c.G53A:p.R18Q,ENSG00000167914:ENST00000577447:exon2:c.G53A:p.R18Q	Score=387;Name=lod=50	Name=Asthma	17q21.1	NA	NA	NA	NA	rs3894194	0.43	0.43	0.387	0.430911	0.4463	0.5397	0.5043	0.2587	0.4836	0.44	0.5	0.5	0.26	0.4824	0.5	0.44	T	0.016	B	0.01	B	0.489	N	0.941	P	1.56	L	1.94	T	-0.939	T	0.000	T	0.314	2.271	13.55	3.34	1.245	0.886	7.603	2.270656	2.270656	NA	0.456031	0.295008	NA	0.435	NA	9.9486024
657	19	33467515	33467515	T	C	exonic	C19orf40	NA	nonsynonymous SNV	C19orf40:NM_152266:exon5:c.T575C:p.I192T	exonic	ENSG00000131944	NA	nonsynonymous SNV	ENSG00000131944:ENST00000590179:exon3:c.T290C:p.I97T,ENSG00000131944:ENST00000589646:exon4:c.T290C:p.I97T,ENSG00000131944:ENST00000588258:exon5:c.T575C:p.I192T,ENSG00000131944:ENST00000590281:exon5:c.T575C:p.I192T	NA	NA	19q13.11	NA	NA	Name=2	NA	rs3816032	0.16	0.16	0.13	0.189696	0.1074	0.3403	0.1297	0.0809	0.3088	0.09	0.32	0.14	0.1	0.1583	0.32	0.6	T	0.002	B	0.008	B	0.402	N	1.000	P	1.5	L	.	.	-1.003	T	0.000	T	0.055	0.012	4.075	3.21	0.383	1.380	10.026	0.011771	NA	0.18	0.119186	0.083069	NA	0.138	NA	9.9484474
657	21	18937758	18937758	A	G	exonic	CXADR	NA	nonsynonymous SNV	CXADR:NM_001207065:exon3:c.A223G:p.T75A,CXADR:NM_001207064:exon4:c.A428G:p.H143R,CXADR:NM_001207063:exon5:c.A584G:p.H195R	exonic	ENSG00000154639	NA	nonsynonymous SNV	ENSG00000154639:ENST00000356275:exon3:c.A223G:p.T75A,ENSG00000154639:ENST00000400165:exon4:c.A428G:p.H143R,ENSG00000154639:ENST00000400166:exon5:c.A584G:p.H195R	NA	NA	21q21.1	NA	NA	NA	NA	rs437470	0.18	0.18	0.177	0.187101	0.1233	0.1468	0.1196	0.3737	0.09	0.1	0.15	0.13	0.38	0.139	0.38	0.37	T	0.0	B	0.001	B	.	.	0.000	P	.	.	-2.52	D	-1.061	T	0.000	T	.	-0.929	0.381	-10.6	-4.439	-2.428	3.001	-0.928851	NA	0	0.125465	0.318883	NA	0.246	NA	9.9455684
657	16	77328990	77328990	C	A	exonic	ADAMTS18	NA	nonsynonymous SNV	ADAMTS18:NM_199355:exon19:c.G2836T:p.A946S	exonic	ENSG00000140873	NA	nonsynonymous SNV	ENSG00000140873:ENST00000282849:exon19:c.G2836T:p.A946S	Score=385;Name=lod=49	NA	16q23.1	NA	NA	NA	NA	rs12935394	0.12	0.12	0.117	0.114018	0.1262	0.1935	0.183	0.0053	0.1176	0.13	0.19	0.16	0.01	0.1312	0.19	0.87	T	0.0	B	0.001	B	0.000	N	1.000	P	-2.475	N	0.78	T	-1.032	T	0.000	T	0.058	-0.743	0.837	3.28	0.426	1.489	3.918	-0.743407	NA	0.79	0.130814	0.021611	NA	0.065	NA	9.9451194
657	10	76854564	76854564	C	T	exonic	DUSP13	NA	nonsynonymous SNV	DUSP13:NM_001007272:exon4:c.G617A:p.C206Y,DUSP13:NM_016364:exon4:c.G467A:p.C156Y,DUSP13:NM_001007273:exon6:c.G746A:p.C249Y	exonic	ENSG00000079393	NA	nonsynonymous SNV	ENSG00000079393:ENST00000464872:exon3:c.G314A:p.C105Y,ENSG00000079393:ENST00000372700:exon4:c.G617A:p.C206Y,ENSG00000079393:ENST00000472493:exon4:c.G467A:p.C156Y,ENSG00000079393:ENST00000478873:exon4:c.G875A:p.C292Y,ENSG00000079393:ENST00000605915:exon5:c.G533A:p.C178Y,ENSG00000079393:ENST00000607131:exon6:c.G746A:p.C249Y,ENSG00000079393:ENST00000491677:exon8:c.G854A:p.C285Y	Score=539;Name=lod=206	NA	10q22.2	NA	NA	NA	NA	rs3088142	0.65	0.65	0.62	0.641773	0.4433	0.9028	0.6844	0.6884	0.4836	0.45	0.91	0.63	0.68	0.5191	0.91	1	T	0.052	B	0.015	B	0.220	N	0.000	P	-0.135	N	-1.87	D	-0.984	T	0.000	T	0.065	-0.513	1.656	-2.21	-1.260	-0.120	7.288	-0.512679	NA	1	0.42593	0.658874	NA	0.681	NA	9.9450034
658	10	13330402	13330402	T	C	exonic	PHYH	NA	synonymous SNV	PHYH:NM_001037537:exon5:c.A336G:p.T112T,PHYH:NM_006214:exon6:c.A636G:p.T212T	exonic	ENSG00000107537	NA	synonymous SNV	ENSG00000107537:ENST00000396913:exon5:c.A336G:p.T112T,ENSG00000107537:ENST00000263038:exon6:c.A636G:p.T212T,ENSG00000107537:ENST00000396920:exon6:c.A585G:p.T195T,ENSG00000107537:ENST00000453759:exon6:c.A336G:p.T112T	Score=443;Name=lod=84	NA	10p13	Score=754;Name=V$MYOGNF1_01	Name=IRF4_(M-17),Pol2,EBF1_(C-8),PAX5-N19	Name=7	NA	rs473407	0.24	0.24	0.229	0.239018	0.2286	0.124	0.1686	0.4312	0.1585	0.23	0.15	0.17	0.43	0.2394	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.260186	NA	NA	0.254884	0.38788	NA	0.21	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000081366.3;CLNDSDB=.;CLNDSDBID=.	9.9437826
658	16	78064733	78064733	C	A	exonic	CLEC3A	NA	nonsynonymous SNV	CLEC3A:NM_001244755:exon2:c.C433A:p.Q145K,CLEC3A:NM_005752:exon3:c.C616A:p.Q206K	exonic	ENSG00000166509	NA	nonsynonymous SNV	ENSG00000166509:ENST00000299642:exon3:c.C616A:p.Q206K,ENSG00000166509:ENST00000575655:exon3:c.C589A:p.Q197K	Score=369;Name=lod=42	NA	16q23.1	NA	NA	NA	NA	rs2072663	0.15	0.15	0.129	0.13139	0.1223	0.245	0.1441	0.0719	0.0951	0.12	0.25	0.12	0.1	0.1341	0.25	0.41	T	0.001	B	0.0	B	0.018	N	1.000	P	0	N	.	.	-1.026	T	0.000	T	0.115	1.269	10.14	3.85	0.547	3.057	10.229	1.268501	1.268501	0.44	0.133403	0.082575	NA	0.167	NA	9.9435304
658	2	27462076	27462076	C	T	exonic	CAD	NA	synonymous SNV	CAD:NM_004341:exon32:c.C5229T:p.P1743P	exonic	ENSG00000084774	NA	synonymous SNV	ENSG00000084774:ENST00000403525:exon31:c.C5040T:p.P1680P,ENSG00000084774:ENST00000264705:exon32:c.C5229T:p.P1743P	NA	NA	2p23.3	NA	NA	NA	NA	rs3739092	0.23	0.23	0.21	0.265575	0.2237	0.1488	0.3689	0.2716	0.3476	0.23	0.11	0.31	0.3	0.2681	0.31	0.14	T	.	.	.	.	0.000	D	0.000	P	.	.	.	.	-1.028	T	0.000	T	.	0.551	6.98	-5.32	-2.352	-3.104	4.550	0.550843	NA	NA	0.231977	0.238084	NA	0.268	NA	9.9428896
658	1	152280900	152280900	T	G	exonic	FLG	NA	nonsynonymous SNV	FLG:NM_002016:exon3:c.A6462C:p.Q2154H	exonic	ENSG00000143631	NA	nonsynonymous SNV	ENSG00000143631:ENST00000368799:exon3:c.A6462C:p.Q2154H	NA	NA	1q21.3	NA	NA	NA	NA	rs74129452	NA	NA	0.217	0.34385	0.1541	0.4444	0.3487	0.3843	0.3773	NA	NA	NA	NA	0.2366	0.087	0.18	T	0.0	B	0.0	B	.	.	1.000	N	-2.255	N	3.9	T	-0.888	T	0.001	T	0.054	-0.347	2.361	-5.18	-3.813	-3.334	0.166	-0.346581	NA	1	NA	NA	NA	0.087	NA	9.9426334
658	2	220046840	220046840	G	A	exonic	FAM134A	NA	nonsynonymous SNV	FAM134A:NM_024293:exon9:c.G1121A:p.R374H	exonic	ENSG00000144567	NA	nonsynonymous SNV	ENSG00000144567:ENST00000430297:exon9:c.G1121A:p.R374H,ENSG00000144567:ENST00000458520:exon9:c.G500A:p.R167H	NA	NA	2q35	NA	NA	NA	NA	rs3210652	0.12	0.12	0.098	0.0952476	0.1382	0.1706	0.121	0.0144	0.0644	0.14	0.17	0.12	0.02	0.1223	0.17	0.52	T	0.0	B	0.0	B	0.669	N	1.000	P	-0.895	N	1.56	T	-1.020	T	0.000	T	0.232	-1.529	0.016	2.82	1.232	1.578	9.160	-1.529021	NA	0	0.132093	0.032229	NA	0.087	NA	9.9407404
658	7	141672604	141672604	T	C	exonic	TAS2R38	NA	nonsynonymous SNV	TAS2R38:NM_176817:exon1:c.A886G:p.I296V	exonic	ENSG00000257138	NA	nonsynonymous SNV	ENSG00000257138:ENST00000547270:exon1:c.A886G:p.I296V	NA	NA	7q34	Score=775;Name=V$MYOGNF1_01	NA	NA	NA	rs10246939	0.55	0.55	0.52	0.520567	0.4612	0.6766	0.6873	0.4766	0.362	0.45	0.65	0.64	0.52	0.4761	0.65	0.24	T	0.747	P	0.759	P	0.001	N	0.057	P	1.665	L	0.68	T	-0.925	T	0.000	T	0.117	0.759	8.017	0.982	-0.099	-2.380	8.797	0.758746	NA	0.39	0.455581	0.477985	NA	0.507	CLINSIG=drug-response;CLNDBN=Phenylthiocarbamide_tasting;CLNREVSTAT=single;CLNACC=RCV000003040.1;CLNDSDB=MedGen;CLNDSDBID=C1868398	9.9404524
658	3	67054649	67054649	T	C	exonic	KBTBD8	NA	nonsynonymous SNV	KBTBD8:NM_032505:exon3:c.T1258C:p.C420R	exonic	ENSG00000163376	NA	nonsynonymous SNV	ENSG00000163376:ENST00000295568:exon3:c.T1180C:p.C394R,ENSG00000163376:ENST00000417314:exon3:c.T1258C:p.C420R	Score=555;Name=lod=241	NA	3p14.1	NA	NA	NA	NA	rs13096789	0.1	0.1	0.084	0.0934505	0.1352	0.0179	0.2305	0.0522	0.0869	0.14	0.02	0.19	0.05	0.1244	0.19	.	.	0.003	B	0.005	B	0.000	N	0.000	P	-0.075	N	-1.05	T	-1.113	T	0.000	T	0.137	1.242	10.04	2.69	0.369	4.094	9.381	1.242106	1.242106	0.76	0.135698	0.06128	NA	0.094	NA	9.9380354
658	8	26628028	26628028	A	G	exonic	ADRA1A	NA	nonsynonymous SNV	ADRA1A:NM_000680:exon2:c.T1039C:p.C347R,ADRA1A:NM_033302:exon2:c.T1039C:p.C347R,ADRA1A:NM_033303:exon2:c.T1039C:p.C347R,ADRA1A:NM_033304:exon2:c.T1039C:p.C347R	exonic	ENSG00000120907	NA	nonsynonymous SNV	ENSG00000120907:ENST00000276393:exon2:c.T1039C:p.C347R,ENSG00000120907:ENST00000354550:exon2:c.T1039C:p.C347R,ENSG00000120907:ENST00000380582:exon2:c.T1039C:p.C347R,ENSG00000120907:ENST00000380586:exon2:c.T1039C:p.C347R,ENSG00000120907:ENST00000519229:exon2:c.T1039C:p.C347R,ENSG00000120907:ENST00000380573:exon3:c.T1039C:p.C347R	Score=376;Name=lod=45	NA	8p21.2	NA	NA	NA	NA	rs1048101	0.64	0.64	0.645	0.648163	0.4334	0.8929	0.4928	0.7844	0.5429	0.44	0.88	0.49	0.77	0.519	0.88	0.93	T	0.0	B	0.0	B	0.000	N	0.000	P	-1.155	N	1.4	T	-0.978	T	0.000	T	0.048	0.452	6.452	5.83	1.498	2.915	14.870	0.451582	NA	0.86	0.445465	0.739446	NA	0.58	NA	9.9354684
659	15	59500116	59500116	T	C	exonic	LDHAL6B	NA	nonsynonymous SNV	LDHAL6B:NM_033195:exon1:c.T977C:p.I326T	exonic	ENSG00000171989	NA	nonsynonymous SNV	ENSG00000171989:ENST00000307144:exon1:c.T977C:p.I326T	Score=433;Name=lod=77	NA	15q22.2	NA	NA	NA	NA	rs3825937	0.36	0.36	0.336	0.398962	0.2734	0.5694	0.3934	0.2496	0.5583	0.27	0.59	0.35	0.24	0.3471	0.59	0.06	T	0.069	B	0.512	P	0.001	U	0.000	P	2.175	M	-0.03	T	-0.902	T	0.000	T	0.18	3.597	18.32	1.47	0.654	4.730	4.957	3.597035	3.597035	0.02	0.278102	0.261068	NA	0.29	NA	9.9347314
659	19	2109157	2109157	T	C	exonic	AP3D1	NA	nonsynonymous SNV	AP3D1:NM_003938:exon28:c.A3214G:p.I1072V,AP3D1:NM_001261826:exon30:c.A3400G:p.I1134V	exonic	ENSG00000065000	NA	nonsynonymous SNV	ENSG00000065000:ENST00000350812:exon23:c.A2707G:p.I903V,ENSG00000065000:ENST00000345016:exon28:c.A3214G:p.I1072V,ENSG00000065000:ENST00000356926:exon29:c.A3091G:p.I1031V,ENSG00000065000:ENST00000355272:exon30:c.A3400G:p.I1134V	NA	NA	19p13.3	Score=831;Name=V$PBX1_02	NA	NA	NA	rs25673	0.07	0.07	0.065	0.0778754	0.1153	NA	0.0677	0.0779	0.1268	0.11	NA	0.09	0.09	0.1275	0.16	0.5	T	0.004	B	0.002	B	0.004	N	0.999	P	1.6	L	0.87	T	-1.030	T	0.000	T	0.032	-1.604	0.014	-5.88	-1.861	-0.827	7.611	-1.603914	NA	0.44	0.156856	0.09399	NA	0.065	NA	9.9336774
659	19	18378219	18378219	A	G	exonic	KIAA1683	NA	nonsynonymous SNV	KIAA1683:NM_001145304:exon3:c.T131C:p.L44P,KIAA1683:NM_025249:exon3:c.T131C:p.L44P	exonic	ENSG00000130518	NA	nonsynonymous SNV	ENSG00000130518:ENST00000392413:exon3:c.T131C:p.L44P,ENSG00000130518:ENST00000600328:exon3:c.T131C:p.L44P	NA	NA	19p13.11	NA	Name=Egr-1	NA	NA	rs1469023	0.55	0.55	0.563	0.561502	0.4523	0.5516	0.6052	0.73	0.4254	0.45	0.52	0.54	0.72	0.502	0.72	0.09	T	0.0	B	0.0	B	.	.	1.000	P	-0.805	N	3.9	T	-1.059	T	0.000	T	0.031	0.631	7.39	-2.54	-1.090	-1.300	3.5	0.630654	NA	0.15	0.445452	0.705175	NA	0.522	NA	9.9335814
659	10	128193368	128193368	C	T	exonic	C10orf90	NA	nonsynonymous SNV	C10orf90:NM_001004298:exon3:c.G401A:p.R134H	exonic	ENSG00000154493	NA	nonsynonymous SNV	ENSG00000154493:ENST00000284694:exon3:c.G401A:p.R134H,ENSG00000154493:ENST00000356858:exon3:c.G260A:p.R87H,ENSG00000154493:ENST00000392694:exon3:c.G260A:p.R87H,ENSG00000154493:ENST00000432642:exon3:c.G401A:p.R134H,ENSG00000154493:ENST00000454341:exon3:c.G401A:p.R134H,ENSG00000154493:ENST00000488181:exon4:c.G260A:p.R87H,ENSG00000154493:ENST00000544758:exon4:c.G692A:p.R231H	NA	NA	10q26.2	NA	NA	NA	NA	rs11245008	0.21	0.21	0.202	0.215056	0.1153	0.129	0.1599	0.4592	0.1155	0.12	0.15	0.16	0.44	0.1561	0.44	0.28	T	0.03	B	0.011	B	0.269	N	1.000	P	-0.2	N	2.03	T	-0.996	T	0.000	T	0.065	1.138	9.636	-9.93	-3.872	-2.225	11.455	1.137739	NA	0.14	0.128855	0.374427	NA	0.246	NA	9.9330784
659	1	24861704	24861704	G	A	exonic	RCAN3	NA	nonsynonymous SNV	RCAN3:NM_001251985:exon2:c.G317A:p.R106Q,RCAN3:NM_001251982:exon3:c.G491A:p.R164Q	exonic	ENSG00000117602	NA	nonsynonymous SNV	ENSG00000117602:ENST00000374393:exon2:c.G317A:p.R106Q,ENSG00000117602:ENST00000412742:exon3:c.G491A:p.R164Q	NA	NA	1p36.11	NA	Name=E2F6_(H-50),EBF1_(C-8)	Name=20	NA	rs196432	0.52	0.52	0.512	0.509185	0.4573	0.7272	0.4006	0.4667	0.4724	0.48	0.73	0.39	0.44	0.4822	0.73	0.87	T	0.014	B	0.005	B	.	.	0.000	P	.	.	.	.	-1.029	T	0.000	T	.	-1.348	0.029	-11.6	-4.477	-3.588	9.401	-1.348475	NA	1	0.461163	0.46414	ID=COSM1341222;OCCURENCE=1(large_intestine)	0.362	NA	9.9326704
659	18	8798185	8798185	G	A	exonic	SOGA2	NA	nonsynonymous SNV	SOGA2:NM_015210:exon10:c.G2332A:p.G778S	exonic	ENSG00000168502	NA	nonsynonymous SNV	ENSG00000168502:ENST00000518815:exon3:c.G277A:p.G93S,ENSG00000168502:ENST00000306329:exon8:c.G3289A:p.G1097S,ENSG00000168502:ENST00000517570:exon8:c.G2209A:p.G737S,ENSG00000168502:ENST00000400050:exon9:c.G2209A:p.G737S,ENSG00000168502:ENST00000306285:exon10:c.G277A:p.G93S,ENSG00000168502:ENST00000359865:exon10:c.G2332A:p.G778S	NA	NA	18p11.22	NA	NA	NA	NA	rs12386117	0.08	0.08	0.072	0.0748802	0.1421	0.0228	0.0865	0.0567	0.0757	0.15	0.02	0.09	0.05	0.1158	0.15	0.59	T	0.176	B	0.037	B	0.001	N	0.984	P	0.46	N	-0.36	T	-1.075	T	0.001	T	0.194	3.42	17.56	4.51	1.404	1.961	11.536	3.420396	3.420396	NA	0.145	0.05606	NA	0.203	NA	9.9304334
659	21	47831509	47831509	A	G	exonic	PCNT	NA	nonsynonymous SNV	PCNT:NM_006031:exon28:c.A5522G:p.N1841S	exonic	ENSG00000160299	NA	nonsynonymous SNV	ENSG00000160299:ENST00000359568:exon28:c.A5522G:p.N1841S	NA	NA	21q22.3	NA	NA	Name=3	NA	rs35940413	0.19	0.19	0.21	0.202875	0.1322	0.004	0.1369	0.5113	0.1104	0.14	0.0035	0.15	0.5	0.1413	0.5	0.78	T	0.0	B	0.0	B	0.755	N	1.000	P	-0.695	N	4.92	T	-1.067	T	0.000	T	0.021	-2.021	0.006	2.58	0.770	0.260	7.481	-2.02143	NA	0.54	0.129535	0.458428	NA	0.188	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000081353.1|RCV000127367.1;CLNDSDB=.|.;CLNDSDBID=.|.	9.9302984
659	7	34979905	34979905	C	A	exonic	DPY19L1	NA	nonsynonymous SNV	DPY19L1:NM_015283:exon19:c.G1505T:p.G502V	exonic	ENSG00000173852	NA	nonsynonymous SNV	ENSG00000173852:ENST00000310974:exon19:c.G1505T:p.G502V	Score=410;Name=lod=62	NA	7p14.3	NA	NA	NA	NA	rs1637696	0.22	0.22	0.208	0.205272	0.2982	0.129	0.255	0.1589	0.2157	0.3	0.13	0.25	0.2	0.2724	0.33	0.32	T	0.549	P	0.227	B	0.096	N	0.001	P	0.55	N	0.51	T	-0.982	T	0.000	T	0.147	1.582	11.25	5.24	2.619	0.945	7.391	1.582436	1.582436	0.29	0.332926	0.18084	NA	0.283	NA	9.9298074
659	10	45496120	45496120	A	T	exonic	C10orf25	NA	nonsynonymous SNV	C10orf25:NM_001039380:exon1:c.T188A:p.I63N	exonic	ENSG00000165511	NA	nonsynonymous SNV	ENSG00000165511:ENST00000298298:exon1:c.T188A:p.I63N	NA	NA	10q11.21	NA	Name=CTCF	NA	NA	rs12269028	0.48	0.48	0.417	0.460463	0.6571	0.371	0.6945	0.2231	0.5051	0.64	0.36	0.67	0.26	0.5984	0.67	0	D	0.981	D	0.654	P	.	.	1.000	P	0	N	1.12	T	-0.934	T	0.000	T	0.331	0.21	5.134	-2.84	-0.646	0.246	3.232	0.2104	NA	NA	0.649419	0.325238	NA	0.543	NA	9.9284144
659	17	38062217	38062217	C	T	exonic	GSDMB	NA	nonsynonymous SNV	GSDMB:NM_018530:exon6:c.G844A:p.G282R,GSDMB:NM_001042471:exon8:c.G871A:p.G291R,GSDMB:NM_001165959:exon8:c.G883A:p.G295R,GSDMB:NM_001165958:exon9:c.G910A:p.G304R	exonic	ENSG00000073605	NA	nonsynonymous SNV	ENSG00000073605:ENST00000394175:exon6:c.G844A:p.G282R,ENSG00000073605:ENST00000309481:exon8:c.G871A:p.G291R,ENSG00000073605:ENST00000360317:exon8:c.G910A:p.G304R,ENSG00000073605:ENST00000394179:exon8:c.G895A:p.G299R,ENSG00000073605:ENST00000520542:exon8:c.G883A:p.G295R,ENSG00000073605:ENST00000418519:exon9:c.G910A:p.G304R	NA	NA	17q12	NA	NA	NA	NA	rs2305479	0.35	0.35	0.324	0.311102	0.502	0.2817	0.3646	0.1422	0.3354	0.51	0.31	0.38	0.13	0.4222	0.51	0.06	T	1.0	D	0.999	D	0.849	N	1.000	P	1.895	L	1.92	T	-0.969	T	0.000	T	0.036	2.061	12.85	-2.46	-0.954	0.110	5.321	2.060971	2.060971	0	0.481279	0.184067	ID=COSM148262;OCCURENCE=1(stomach)	0.304	NA	9.9278544
659	6	76640803	76640803	G	A	exonic	IMPG1	NA	nonsynonymous SNV	IMPG1:NM_001563:exon15:c.C2110T:p.R704W	exonic	ENSG00000112706	NA	nonsynonymous SNV	ENSG00000112706:ENST00000369952:exon2:c.C193T:p.R65W,ENSG00000112706:ENST00000369950:exon15:c.C2110T:p.R704W	NA	NA	6q14.1	NA	NA	Name=22	NA	rs10943299	0.09	0.09	0.08	0.0898562	0.1402	0.003	0.0821	0.0862	0.138	0.15	NA	0.08	0.1	0.1217	0.15	1	T	0.0	B	0.0	B	0.785	N	0.882	P	-1.415	N	2.41	T	-0.987	T	0.002	T	0.087	-1.809	0.009	-7.59	-2.374	0.417	8.324	-1.809098	NA	0.58	0.144535	0.095098	NA	0.145	NA	9.9268984
660	19	41384702	41384702	T	C	exonic	CYP2A7	NA	nonsynonymous SNV	CYP2A7:NM_030589:exon4:c.A641G:p.Q214R,CYP2A7:NM_000764:exon5:c.A794G:p.Q265R	exonic	ENSG00000198077	NA	nonsynonymous SNV	ENSG00000198077:ENST00000291764:exon4:c.A641G:p.Q214R,ENSG00000198077:ENST00000301146:exon5:c.A794G:p.Q265R	NA	NA	19q13.2	Score=848;Name=V$OLF1_01	NA	NA	NA	rs117539170	0.13	0.13	0.083	0.139577	0.2336	0.0456	0.1052	0.1664	0.1278	0.21	0.03	0.1	0.15	0.1758	0.21	1	T	0.0	B	0.001	B	0.000	N	1.000	P	-2.145	N	-0.09	T	-1.020	T	0.000	T	0.247	-0.995	0.267	2.18	0.257	1.278	6.428	-0.995466	NA	1	NA	NA	NA	0.101	NA	9.9239334
660	7	134618710	134618710	A	G	exonic	CALD1	NA	nonsynonymous SNV	CALD1:NM_033138:exon5:c.A1190G:p.H397R	exonic	ENSG00000122786	NA	nonsynonymous SNV	ENSG00000122786:ENST00000361675:exon5:c.A1190G:p.H397R	NA	NA	7q33	NA	Name=PU.1	NA	NA	rs6973420	0.55	0.55	0.552	0.508387	0.4821	0.8581	0.366	0.4357	0.3742	0.48	0.86	0.38	0.43	0.4739	0.86	.	.	0.0	B	0.0	B	0.032	N	1.000	P	0	N	1.63	T	-1.012	T	0.000	T	0.008	-1.288	0.04	-4.5	-1.211	-1.464	6.321	-1.287969	NA	0.53	0.453488	0.444394	NA	0.493	NA	9.9238454
660	16	3119304	3119304	A	G	exonic	IL32	NA	nonsynonymous SNV	IL32:NM_001012636:exon5:c.A488G:p.D163G,IL32:NM_001012634:exon6:c.A455G:p.D152G,IL32:NM_001012635:exon6:c.A455G:p.D152G,IL32:NM_001012632:exon7:c.A515G:p.D172G,IL32:NM_001012718:exon7:c.A515G:p.D172G,IL32:NM_004221:exon7:c.A515G:p.D172G,IL32:NM_001012631:exon8:c.A515G:p.D172G,IL32:NM_001012633:exon8:c.A344G:p.D115G	exonic	ENSG00000008517	NA	nonsynonymous SNV	ENSG00000008517:ENST00000548246:exon4:c.A395G:p.D132G,ENSG00000008517:ENST00000551513:exon4:c.A626G:p.D209G,ENSG00000008517:ENST00000382213:exon5:c.A488G:p.D163G,ENSG00000008517:ENST00000548476:exon5:c.A653G:p.D218G,ENSG00000008517:ENST00000008180:exon6:c.A455G:p.D152G,ENSG00000008517:ENST00000396890:exon6:c.A653G:p.D218G,ENSG00000008517:ENST00000526464:exon6:c.A515G:p.D172G,ENSG00000008517:ENST00000529699:exon6:c.A455G:p.D152G,ENSG00000008517:ENST00000530890:exon6:c.A455G:p.D152G,ENSG00000008517:ENST00000531965:exon6:c.A485G:p.D162G,ENSG00000008517:ENST00000534507:exon6:c.A653G:p.D218G,ENSG00000008517:ENST00000548652:exon6:c.A488G:p.D163G,ENSG00000008517:ENST00000548807:exon6:c.A653G:p.D218G,ENSG00000008517:ENST00000552356:exon6:c.A455G:p.D152G,ENSG00000008517:ENST00000552936:exon6:c.A587G:p.D196G,ENSG00000008517:ENST00000325568:exon7:c.A515G:p.D172G,ENSG00000008517:ENST00000440815:exon7:c.A515G:p.D172G,ENSG00000008517:ENST00000444393:exon7:c.A515G:p.D172G,ENSG00000008517:ENST00000525643:exon7:c.A515G:p.D172G,ENSG00000008517:ENST00000530538:exon7:c.A515G:p.D172G,ENSG00000008517:ENST00000533097:exon7:c.A515G:p.D172G,ENSG00000008517:ENST00000552664:exon7:c.A515G:p.D172G,ENSG00000008517:ENST00000396887:exon8:c.A344G:p.D115G,ENSG00000008517:ENST00000528163:exon8:c.A515G:p.D172G,ENSG00000008517:ENST00000529550:exon8:c.A515G:p.D172G,ENSG00000008517:ENST00000549213:exon8:c.A344G:p.D115G,ENSG00000008517:ENST00000551122:exon8:c.A344G:p.D115G	NA	NA	16p13.3	NA	NA	NA	NA	rs2981599	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4135	NA	0.53	T	0.001	B	0.001	B	.	.	1.000	N	0.345	N	0.46	T	-1.046	T	0.060	T	0.453	-0.753	0.809	-2.53	-1.773	-1.447	0.713	-0.752764	NA	0	NA	NA	ID=COSM1629876;OCCURENCE=1(liver)	NA	NA	9.9198334
660	10	64927823	64927823	C	G	exonic	JMJD1C	NA	nonsynonymous SNV	JMJD1C:NM_004241:exon23:c.G6894C:p.E2298D,JMJD1C:NM_032776:exon26:c.G7605C:p.E2535D	exonic	ENSG00000171988	NA	nonsynonymous SNV	ENSG00000171988:ENST00000402544:exon23:c.G6894C:p.E2298D,ENSG00000171988:ENST00000542921:exon25:c.G7059C:p.E2353D,ENSG00000171988:ENST00000399262:exon26:c.G7605C:p.E2535D	Score=613;Name=lod=412	NA	10q21.3	NA	NA	NA	NA	rs1935	0.39	0.39	0.384	0.392173	0.4901	0.3601	0.3112	0.2859	0.5256	0.47	0.39	0.37	0.27	0.4457	0.48	0.14	T	0.355	B	0.057	B	0.000	D	0.000	P	1.245	L	0.83	T	-0.910	T	0.000	T	0.155	2.789	15.29	3.57	1.279	-0.006	5.196	2.788518	2.788518	0.02	0.478277	0.339658	ID=COSM1128024,COSM1128022;OCCURENCE=1(prostate)	0.355	NA	9.9192564
660	19	14040896	14040896	G	A	exonic	CC2D1A	NA	nonsynonymous SNV	CC2D1A:NM_017721:exon27:c.G2716A:p.A906T	exonic	ENSG00000132024	NA	nonsynonymous SNV	ENSG00000132024:ENST00000318003:exon27:c.G2716A:p.A906T,ENSG00000132024:ENST00000589606:exon27:c.G2713A:p.A905T	NA	NA	19p13.12	NA	NA	NA	NA	rs11669628	0.15	0.15	0.124	0.133187	0.1501	0.255	0.111	0.0151	0.1656	0.16	0.25	0.14	0.03	0.1385	0.25	0.31	T	0.074	B	0.003	B	0.712	N	1.000	P	0.345	N	2.31	T	-0.923	T	0.000	T	0.056	1.33	10.36	-4.52	-0.388	-2.576	7.893	1.32967	1.32967	0.34	0.125815	0.033215	NA	0.065	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116594.2;CLNDSDB=.;CLNDSDBID=.	9.9189184
660	14	94776221	94776221	A	C	exonic	SERPINA6	NA	nonsynonymous SNV	SERPINA6:NM_001756:exon3:c.T736G:p.S246A	exonic	ENSG00000170099	NA	nonsynonymous SNV	ENSG00000170099:ENST00000341584:exon3:c.T736G:p.S246A	NA	NA	14q32.13	Score=853;Name=V$RFX1_02	NA	NA	NA	rs2228541	0.58	0.58	0.566	0.598043	0.4364	0.9325	0.6816	0.407	0.6186	0.42	0.91	0.65	0.39	0.5247	0.91	0.07	T	0.001	B	0.01	B	0.631	N	1.000	P	1.205	L	-2.32	D	-0.902	T	0.000	T	0.071	1.98	12.58	-10.7	-1.670	-4.329	0.348	1.979713	1.979713	0.18	0.454651	0.383568	NA	0.558	NA	9.9175824
660	10	38344700	38344700	C	G	exonic	ZNF33A	NA	nonsynonymous SNV	ZNF33A:NM_006954:exon5:c.C1648G:p.Q550E,ZNF33A:NM_006974:exon5:c.C1645G:p.Q549E	exonic	ENSG00000189180	NA	nonsynonymous SNV	ENSG00000189180:ENST00000307441:exon4:c.C1645G:p.Q549E,ENSG00000189180:ENST00000432900:exon4:c.C1666G:p.Q556E,ENSG00000189180:ENST00000374618:exon5:c.C1648G:p.Q550E,ENSG00000189180:ENST00000458705:exon5:c.C1645G:p.Q549E	Score=414;Name=lod=64	NA	10p11.1	NA	Name=KAP1,SETDB1	Name=9	NA	rs2505232	0.51	0.51	0.497	0.477037	0.493	0.5754	0.5173	0.5272	0.2628	0.5	0.55	0.5	0.49	0.4463	0.55	1	T	0.0	B	0.0	B	0.003	N	1.000	P	-1.19	N	2.75	T	-0.938	T	0.000	T	0.125	-2.414	0.003	1.68	0.044	4.342	7.605	-2.414126	NA	1	0.477093	0.514753	NA	0.522	NA	9.9169404
660	6	38746176	38746176	G	A	exonic	DNAH8	NA	nonsynonymous SNV	DNAH8:NM_001206927:exon14:c.G1975A:p.A659T	exonic	ENSG00000124721	NA	nonsynonymous SNV	ENSG00000124721:ENST00000441566:exon10:c.G1324A:p.A442T,ENSG00000124721:ENST00000359357:exon12:c.G1324A:p.A442T,ENSG00000124721:ENST00000327475:exon13:c.G1939A:p.A647T,ENSG00000124721:ENST00000449981:exon14:c.G1975A:p.A659T	Score=536;Name=lod=202	NA	6p21.2	NA	NA	NA	NA	rs61748601	0.11	0.11	0.091	0.0852636	0.1362	0.0198	0.2334	0.053	0.0389	0.14	0.02	0.22	0.06	0.1285	0.22	0.66	T	0.0	B	0.005	B	0.003	N	0.056	P	-0.775	N	0.5	T	-1.007	T	0.017	T	0.04	0.319	5.727	3.55	1.222	0.659	4.767	0.318627	NA	0.58	0.151815	0.065138	NA	0.181	NA	9.9168184
661	12	108985945	108985945	A	G	exonic	TMEM119	NA	nonsynonymous SNV	TMEM119:NM_181724:exon2:c.T215C:p.I72T	exonic	ENSG00000183160	NA	nonsynonymous SNV	ENSG00000183160:ENST00000392806:exon2:c.T215C:p.I72T,ENSG00000183160:ENST00000549031:exon3:c.T215C:p.I72T	Score=284;Name=lod=19	NA	12q23.3	NA	NA	NA	NA	rs7975237	0.61	0.61	0.606	0.655551	0.4433	0.8532	0.4539	0.7542	0.68	0.43	0.85	0.48	0.69	0.527	0.85	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-2.125	N	1.1	T	-0.962	T	0.000	T	0.204	-1.224	0.061	4.59	1.089	1.977	10.659	-1.223836	NA	1	0.449419	0.721516	NA	0.587	NA	9.9136144
661	2	218745685	218745685	G	A	exonic	TNS1	NA	synonymous SNV	TNS1:NM_022648:exon16:c.C990T:p.S330S	exonic	ENSG00000079308	NA	synonymous SNV	ENSG00000079308:ENST00000310858:exon13:c.C1083T:p.S361S,ENSG00000079308:ENST00000413554:exon13:c.C1194T:p.S398S,ENSG00000079308:ENST00000419504:exon15:c.C990T:p.S330S,ENSG00000079308:ENST00000430930:exon15:c.C990T:p.S330S,ENSG00000079308:ENST00000171887:exon16:c.C990T:p.S330S,ENSG00000079308:ENST00000446903:exon18:c.C1365T:p.S455S	Score=565;Name=lod=263	NA	2q35	Score=765;Name=V$PAX4_04	NA	NA	NA	rs10199795	0.58	0.58	0.577	0.530751	0.6074	0.5347	0.536	0.584	0.3722	0.61	0.54	0.58	0.56	0.5426	0.61	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	1.234	10.01	-5.36	-0.981	-4.843	5.595	1.233765	1.233765	NA	0.604302	0.585111	ID=COSM149063;OCCURENCE=1(stomach)	0.406	NA	9.9123646
661	3	41996136	41996136	T	C	exonic	ULK4	NA	nonsynonymous SNV	ULK4:NM_017886:exon2:c.A116G:p.K39R	exonic	ENSG00000168038	NA	nonsynonymous SNV	ENSG00000168038:ENST00000301831:exon2:c.A116G:p.K39R,ENSG00000168038:ENST00000414606:exon2:c.A116G:p.K39R,ENSG00000168038:ENST00000420927:exon2:c.A116G:p.K39R,ENSG00000168038:ENST00000431379:exon2:c.A116G:p.K39R,ENSG00000168038:ENST00000453224:exon2:c.A116G:p.K39R	Score=581;Name=lod=305	Name=Multiple myeloma (hyperdiploidy)	3p22.1	NA	NA	NA	NA	rs2272007	0.7	0.7	0.653	0.682109	0.8091	0.8512	0.8098	0.2821	0.8272	0.8	0.84	0.8	0.29	0.7869	0.84	0.41	T	0.205	B	0.132	B	0.000	N	0.042	P	-0.635	N	-0.19	T	-1.015	T	0.000	T	0.125	1.106	9.511	4.4	1.058	3.866	11.703	1.105636	NA	0.29	0.82503	0.358431	ID=COSM1131441,COSM1131440;OCCURENCE=1(prostate)	0.652	NA	9.9123034
661	16	66614008	66614008	T	C	exonic	CMTM2	NA	nonsynonymous SNV	CMTM2:NM_144673:exon2:c.T365C:p.I122T	exonic	ENSG00000140932	NA	nonsynonymous SNV	ENSG00000140932:ENST00000268595:exon2:c.T365C:p.I122T	NA	NA	16q21	NA	NA	NA	NA	rs2290182	0.22	0.22	0.227	0.236621	0.1302	0.3036	0.2421	0.2663	0.2331	0.13	0.29	0.24	0.27	0.1799	0.29	0.35	T	0.058	B	0.063	B	0.057	N	1.000	P	1.355	L	1.43	T	-1.023	T	0.000	T	0.073	2.595	14.64	3.42	1.059	3.042	6.694	2.595383	2.595383	0.06	0.11314	0.26647	NA	0.188	NA	9.9100934
661	5	140720516	140720516	C	G	exonic	PCDHGA2	NA	nonsynonymous SNV	PCDHGA2:NM_018915:exon1:c.C1978G:p.L660V,PCDHGA2:NM_032009:exon1:c.C1978G:p.L660V	exonic	ENSG00000081853	NA	nonsynonymous SNV	ENSG00000081853:ENST00000394576:exon1:c.C1978G:p.L660V	NA	NA	5q31.3	Score=798;Name=V$PAX3_01	Name=NRSF	NA	NA	rs11575969	0.39	0.39	0.259	0.385982	0.4722	0.5903	0.4222	0.0204	0.5552	0.46	0.59	0.41	0.04	0.4697	0.59	0.37	T	0.092	B	0.182	B	0.070	U	0.000	P	-0.175	N	0.55	T	-0.935	T	0.000	T	0.092	-0.128	3.374	2.01	0.676	-1.561	3.494	-0.127759	NA	0.3	0.484353	0.096811	NA	0.333	NA	9.9070804
661	3	190106074	190106074	G	C	exonic	CLDN16	NA	nonsynonymous SNV	CLDN16:NM_006580:exon1:c.G166C:p.A56P	exonic	ENSG00000113946	NA	nonsynonymous SNV	ENSG00000113946:ENST00000264734:exon1:c.G166C:p.A56P,ENSG00000113946:ENST00000456423:exon1:c.G166C:p.A56P	NA	NA	3q28	NA	NA	NA	NA	rs3214506	NA	NA	NA	0.117013	0.2336	0.0208	0.1455	0.0681	0.1421	NA	NA	NA	NA	0.1945	NA	0.2	T	0.006	B	0.015	B	0.187	N	1.000	N	0.55	N	-2.9	D	-0.495	T	0.543	D	0.302	0.449	6.438	-3.93	-0.435	-0.121	0.443	0.448874	NA	0.15	NA	NA	NA	NA	NA	9.9052334
662	1	221057739	221057739	C	G	exonic	HLX	NA	nonsynonymous SNV	HLX:NM_021958:exon4:c.C1160G:p.A387G	exonic	ENSG00000136630	NA	nonsynonymous SNV	ENSG00000136630:ENST00000549319:exon2:c.C518G:p.A173G,ENSG00000136630:ENST00000366903:exon4:c.C1160G:p.A387G,ENSG00000136630:ENST00000427693:exon4:c.C359G:p.A120G	Score=569;Name=lod=275	NA	1q41	NA	NA	NA	NA	rs11578466	0.1	0.1	0.085	0.0746805	0.162	0.001	0.1066	0.0719	0.0419	0.16	NA	0.12	0.09	0.1188	0.16	0.21	T	0.012	B	0.021	B	0.132	N	0.207	P	0.255	N	0.61	T	-0.959	T	0.004	T	0.142	3.293	17.06	3.16	0.642	1.083	8.363	3.292686	3.292686	0.12	0.149651	0.079664	NA	0.094	NA	9.9028824
662	4	99808254	99808254	G	A	exonic	EIF4E	NA	synonymous SNV	EIF4E:NM_001130678:exon5:c.C435T:p.D145D,EIF4E:NM_001130679:exon5:c.C375T:p.D125D,EIF4E:NM_001968:exon5:c.C375T:p.D125D	exonic	ENSG00000151247	NA	synonymous SNV	ENSG00000151247:ENST00000280892:exon5:c.C435T:p.D145D,ENSG00000151247:ENST00000450253:exon5:c.C375T:p.D125D,ENSG00000151247:ENST00000505992:exon5:c.C375T:p.D125D,ENSG00000151247:ENST00000504432:exon6:c.C459T:p.D153D	Score=673;Name=lod=727	NA	4q23	Score=924;Name=V$RORA1_01	NA	NA	NA	rs62323192	0.12	0.12	0.122	0.109425	0.2734	0.001	0.1455	0.0144	0.1554	0.27	0.0017	0.15	0.02	0.2065	0.29	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.041	T	0.000	T	.	1.304	10.27	4.14	0.823	4.700	9.897	1.303728	1.303728	NA	0.287442	0.052202	ID=COSM1130974;OCCURENCE=1(prostate)	0.203	NA	9.8993246
662	1	47767914	47767914	G	A	exonic	STIL	NA	nonsynonymous SNV	STIL:NM_001048166:exon4:c.C257T:p.A86V,STIL:NM_003035:exon4:c.C257T:p.A86V	exonic	ENSG00000123473	NA	nonsynonymous SNV	ENSG00000123473:ENST00000413565:exon2:c.C269T:p.A90V,ENSG00000123473:ENST00000243182:exon4:c.C257T:p.A86V,ENSG00000123473:ENST00000337817:exon4:c.C257T:p.A86V,ENSG00000123473:ENST00000371877:exon4:c.C257T:p.A86V,ENSG00000123473:ENST00000396221:exon4:c.C257T:p.A86V,ENSG00000123473:ENST00000360380:exon5:c.C257T:p.A86V,ENSG00000123473:ENST00000447475:exon5:c.C257T:p.A86V	Score=473;Name=lod=112	NA	1p33	NA	NA	NA	NA	rs3125630	0.61	0.61	0.628	0.60643	0.4553	0.5675	0.5937	0.8805	0.4407	0.47	0.59	0.57	0.86	0.5034	0.86	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-2.28	N	1.87	T	-0.967	T	0.000	T	0.351	-0.118	3.42	5.42	0.891	5.182	10.116	-0.118387	NA	1	0.476977	0.819791	NA	0.594	CLINSIG=non-pathogenic;CLNDBN=Primary_autosomal_recessive_microcephaly_7;CLNREVSTAT=single;CLNACC=RCV000020526.1;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet;CLNDSDBID=NBK9587:C2675187:612703:ORPHA2512	9.8976564
662	13	78188078	78188078	A	G	exonic	SCEL	NA	nonsynonymous SNV	SCEL:NM_001160706:exon22:c.A1313G:p.K438R,SCEL:NM_003843:exon23:c.A1379G:p.K460R,SCEL:NM_144777:exon24:c.A1439G:p.K480R	exonic	ENSG00000136155	NA	nonsynonymous SNV	ENSG00000136155:ENST00000535157:exon22:c.A1313G:p.K438R,ENSG00000136155:ENST00000377246:exon23:c.A1379G:p.K460R,ENSG00000136155:ENST00000349847:exon24:c.A1439G:p.K480R	Score=403;Name=lod=58	NA	13q22.3	NA	NA	NA	NA	rs8002725	0.19	0.19	0.199	0.215855	0.1183	0.1409	0.1729	0.3903	0.1881	0.11	0.14	0.19	0.36	0.17	0.36	0.53	T	0.003	B	0.011	B	0.001	N	0.992	P	1.725	L	1.84	T	-1.040	T	0.000	T	0.085	0.782	8.124	3.93	0.883	1.211	8.176	0.781687	NA	0.02	0.149302	0.355197	NA	0.268	NA	9.8957314
663	3	41831203	41831203	C	T	exonic	ULK4	NA	nonsynonymous SNV	ULK4:NM_017886:exon21:c.G2143A:p.A715T	exonic	ENSG00000168038	NA	nonsynonymous SNV	ENSG00000168038:ENST00000301831:exon21:c.G2143A:p.A715T	Score=468;Name=lod=106	NA	3p22.1	Score=872;Name=V$RORA1_01	NA	NA	NA	rs17215589	0.09	0.09	0.094	0.0814696	0.166	0.002	0.0879	0.0552	0.1074	0.18	0.0035	0.08	0.06	0.1241	0.18	1	T	0.001	B	0.002	B	0.002	N	0.000	P	-0.49	N	-0.19	T	-1.056	T	0.000	T	0.075	-0.314	2.507	2.31	-0.047	-0.189	4.546	-0.313897	NA	1	0.150376	0.065735	NA	0.13	NA	9.8928574
663	16	716273	716273	T	C	exonic	WDR90	NA	nonsynonymous SNV	WDR90:NM_145294:exon37:c.T4663C:p.C1555R	exonic	ENSG00000161996	NA	nonsynonymous SNV	ENSG00000161996:ENST00000315764:exon3:c.T460C:p.C154R,ENSG00000161996:ENST00000547944:exon3:c.T460C:p.C154R,ENSG00000161996:ENST00000293879:exon37:c.T4663C:p.C1555R,ENSG00000161996:ENST00000549091:exon37:c.T4669C:p.C1557R	NA	NA	16p13.3	Score=832;Name=V$NGFIC_01	NA	NA	NA	rs11866949	0.32	0.32	0.306	0.360623	0.1163	0.3224	0.2133	0.7927	0.1718	0.1	0.32	0.17	0.76	0.2002	0.76	0.62	T	0.0	B	0.001	B	0.152	N	1.000	P	-1.1	N	3.57	T	-0.993	T	0.000	T	0.078	-0.257	2.766	-3.8	-0.600	-1.058	6.673	-0.25687	NA	0.19	0.12527	0.632367	NA	0.304	NA	9.8915634
663	22	42416056	42416056	A	G	exonic	WBP2NL	NA	nonsynonymous SNV	WBP2NL:NM_152613:exon4:c.A362G:p.D121G	exonic	ENSG00000183066	NA	nonsynonymous SNV	ENSG00000183066:ENST00000543212:exon2:c.A140G:p.D47G,ENSG00000183066:ENST00000328823:exon4:c.A362G:p.D121G,ENSG00000183066:ENST00000329620:exon4:c.A362G:p.D121G,ENSG00000183066:ENST00000412113:exon4:c.A362G:p.D121G,ENSG00000183066:ENST00000436265:exon4:c.A362G:p.D121G	Score=397;Name=lod=55	NA	22q13.2	NA	NA	NA	NA	rs133335	0.56	0.56	0.565	0.546126	0.4791	0.8641	0.3631	0.4697	0.5204	0.48	0.85	0.35	0.49	0.4998	0.85	1	T	0.0	B	0.0	B	0.000	N	0.998	P	-2.505	N	3.93	T	-1.000	T	0.000	T	0.203	-0.769	0.762	5.23	1.454	5.333	13.100	-0.7691	NA	1	0.464186	0.480708	NA	0.362	NA	9.8902474
663	17	6683684	6683684	A	G	exonic	FBXO39	NA	nonsynonymous SNV	FBXO39:NM_153230:exon2:c.A497G:p.Y166C	exonic	ENSG00000177294	NA	nonsynonymous SNV	ENSG00000177294:ENST00000321535:exon2:c.A497G:p.Y166C	NA	NA	17p13.1	NA	NA	NA	NA	rs16956264	0.14	0.14	0.121	0.131989	0.162	0.002	0.219	0.1755	0.1145	0.18	0.0017	0.19	0.18	0.1466	0.2	0.18	T	0.0	B	0.001	B	0.152	N	1.000	P	0.345	N	0.6	T	-1.082	T	0.000	T	0.1	-0.23	2.889	3.36	1.041	1.871	5.275	-0.229983	NA	0.1	0.135	0.195642	NA	0.109	NA	9.8897334
663	19	35617270	35617270	T	C	exonic	LGI4	NA	synonymous SNV	LGI4:NM_139284:exon8:c.A1203G:p.T401T	exonic	ENSG00000153902	NA	nonsynonymous SNV	ENSG00000153902:ENST00000392225:exon7:c.A1280G:p.Q427R	NA	NA	19q13.12	NA	NA	NA	NA	rs1319969	0.32	0.32	0.301	0.366414	0.3708	0.2669	0.2493	0.3359	0.589	0.38	0.24	0.23	0.37	0.3873	0.38	0	D	.	.	.	.	.	.	0.000	P	.	.	-0.17	T	-0.962	T	0.000	T	.	0.955	8.894	-9.02	-2.941	-4.585	10.368	0.954608	NA	0	0.356512	0.355424	ID=COSM439239;OCCURENCE=1(breast)	0.348	NA	9.885388
663	19	53770764	53770764	G	A	exonic	VN1R4	NA	nonsynonymous SNV	VN1R4:NM_173857:exon1:c.C155T:p.A52V	exonic	ENSG00000228567	NA	nonsynonymous SNV	ENSG00000228567:ENST00000311170:exon1:c.C155T:p.A52V	NA	NA	19q13.42	NA	NA	NA	NA	rs74429916	0.21	0.21	0.148	NA	NA	NA	NA	NA	NA	0.23	0.08	0.2	0.32	0.2157	0.32	0.01	D	0.995	D	0.919	D	0.005	U	1.000	P	1.76	L	0.87	T	-1.047	T	0.000	T	0.075	2.667	14.88	0.080	0.118	0.705	4.793	2.666556	2.666556	0	0.23255	0.271675	NA	NA	NA	9.8850834
663	1	151108137	151108137	T	G	exonic	SEMA6C	NA	nonsynonymous SNV	SEMA6C:NM_001178062:exon13:c.A1243C:p.T415P,SEMA6C:NM_001178061:exon14:c.A1363C:p.T455P,SEMA6C:NM_030913:exon14:c.A1363C:p.T455P	exonic	ENSG00000143434	NA	nonsynonymous SNV	ENSG00000143434:ENST00000368912:exon13:c.A1243C:p.T415P,ENSG00000143434:ENST00000341697:exon14:c.A1363C:p.T455P,ENSG00000143434:ENST00000368913:exon14:c.A1363C:p.T455P,ENSG00000143434:ENST00000368914:exon14:c.A1363C:p.T455P	Score=501;Name=lod=145	NA	1q21.3	NA	Name=CTCF	Name=7	NA	rs4971007	0.83	0.83	0.834	0.823482	0.8201	0.9048	0.8084	0.7632	0.8354	0.82	0.9	0.82	0.78	0.8189	0.9	0.36	T	0.0	B	0.0	B	0.000	N	0.990	P	0.975	L	2.84	T	-0.967	T	0.009	T	0.098	1.981	12.58	4.64	0.974	0.899	10.287	1.98054	1.98054	0.58	0.809302	0.778484	NA	0.812	NA	9.8850314
664	8	144654255	144654255	A	G	exonic	MROH6	NA	nonsynonymous SNV	MROH6:NM_001100878:exon2:c.T395C:p.V132A	exonic	ENSG00000204839	NA	nonsynonymous SNV	ENSG00000204839:ENST00000398882:exon2:c.T395C:p.V132A,ENSG00000204839:ENST00000529971:exon2:c.T395C:p.V132A	NA	NA	8q24.3	Score=875;Name=V$GR_Q6	Name=ZNF263	Name=10	NA	rs4874153	0.8	0.8	0.781	0.773762	0.8231	0.9058	0.7349	0.6657	0.7607	0.82	0.89	0.74	0.72	0.7955	0.89	1	T	0.0	B	0.0	B	.	.	0.043	P	0	N	4.19	T	-0.975	T	0.000	T	0.105	0.682	7.647	4.3	1.035	0.671	8.222	0.682093	NA	0.61	0.830663	0.69822	ID=COSM454146,COSM454147;OCCURENCE=1(breast)	0.645	NA	9.8840704
664	6	31842598	31842598	T	A	exonic	SLC44A4	NA	nonsynonymous SNV	SLC44A4:NM_001178045:exon6:c.A140T:p.D47V,SLC44A4:NM_025257:exon6:c.A368T:p.D123V	exonic	ENSG00000204385	NA	nonsynonymous SNV	ENSG00000204385:ENST00000229729:exon6:c.A368T:p.D123V,ENSG00000204385:ENST00000544672:exon6:c.A140T:p.D47V	NA	NA	6p21.33	NA	NA	NA	NA	rs12661281	0.11	0.11	0.105	0.0944489	0.1491	0.1022	0.183	0.0068	0.0859	0.14	0.12	0.19	0.01	0.1471	0.19	0.09	T	0.0	B	0.001	B	0.001	N	1.000	P	0.205	N	2.2	T	-1.050	T	0.018	T	0.156	1.549	11.13	-9.67	-2.288	-3.226	10.170	1.549042	1.549042	0.17	0.153721	0.028824	NA	0.174	NA	9.8834124
664	14	34269167	34269167	G	C	exonic	NPAS3	NA	nonsynonymous SNV	NPAS3:NM_001165893:exon11:c.G1564C:p.A522P,NPAS3:NM_022123:exon11:c.G1558C:p.A520P,NPAS3:NM_001164749:exon12:c.G1654C:p.A552P,NPAS3:NM_173159:exon12:c.G1615C:p.A539P	exonic	ENSG00000151322	NA	nonsynonymous SNV	ENSG00000151322:ENST00000346562:exon11:c.G1558C:p.A520P,ENSG00000151322:ENST00000548645:exon11:c.G1564C:p.A522P,ENSG00000151322:ENST00000551634:exon11:c.G1576C:p.A526P,ENSG00000151322:ENST00000356141:exon12:c.G1654C:p.A552P,ENSG00000151322:ENST00000357798:exon12:c.G1615C:p.A539P,ENSG00000151322:ENST00000551492:exon12:c.G1669C:p.A557P	Score=622;Name=lod=449	NA	14q13.1	NA	NA	NA	NA	rs12434716	0.13	0.13	0.105	0.121605	0.1491	0.0099	0.2075	0.1876	0.0583	0.14	0.01	0.22	0.19	0.1421	0.22	1	T	0.0	B	0.0	B	0.099	N	0.000	P	-0.345	N	3.39	T	-1.074	T	0.000	T	0.054	0.081	4.439	2.01	0.590	1.052	5.187	0.081186	NA	1	0.15907	0.195869	NA	0.101	NA	9.8830634
664	18	9117867	9117867	T	C	exonic	NDUFV2	NA	nonsynonymous SNV	NDUFV2:NM_021074:exon2:c.T86C:p.V29A	exonic	ENSG00000178127	NA	nonsynonymous SNV	ENSG00000178127:ENST00000318388:exon2:c.T86C:p.V29A,ENSG00000178127:ENST00000400033:exon3:c.T95C:p.V32A	Score=567;Name=lod=268	NA	18p11.22	NA	NA	NA	NA	rs906807	0.76	0.76	0.737	0.778954	0.831	0.7063	0.8026	0.7368	0.8405	0.82	0.67	0.79	0.74	0.8001	0.82	1	T	0.0	B	0.0	B	0.003	N	0.000	P	-1.465	N	1.02	T	-0.966	T	0.000	T	0.042	-0.511	1.661	4.67	1.497	1.537	11.855	-0.511449	NA	NA	0.819409	0.760781	NA	0.761	CLINSIG=unknown|probable-non-pathogenic|non-pathogenic;CLNDBN=Parkinson_disease\x2c_mitochondrial|not_specified|not_provided;CLNREVSTAT=single|single|single;CLNACC=RCV000009621.1|RCV000117718.2|RCV000127170.1;CLNDSDB=GeneReviews:MedGen:OMIM|.|.;CLNDSDBID=NBK1223:C1838867:556500|.|.	9.8828244
664	3	183755822	183755822	G	A	exonic	HTR3D	NA	nonsynonymous SNV	HTR3D:NM_182537:exon4:c.G155A:p.R52H,HTR3D:NM_001145143:exon6:c.G530A:p.R177H,HTR3D:NM_001163646:exon6:c.G674A:p.R225H	exonic	ENSG00000186090	NA	nonsynonymous SNV	ENSG00000186090:ENST00000453435:exon2:c.G17A:p.R6H,ENSG00000186090:ENST00000334128:exon4:c.G155A:p.R52H,ENSG00000186090:ENST00000382489:exon6:c.G674A:p.R225H,ENSG00000186090:ENST00000428798:exon6:c.G530A:p.R177H	Score=488;Name=lod=128	NA	3q27.1	NA	Name=CTCF_(SC-5916),CTCF	Name=4	NA	rs1000952	0.76	0.76	0.809	0.763978	0.6531	0.9167	0.7061	0.8623	0.6288	0.64	0.92	0.67	0.83	0.6623	0.92	0.02	D	0.998	D	0.753	P	0.000	N	0.983	P	1.73	L	-0.94	T	-0.944	T	0.000	T	0.147	-0.091	3.556	0.149	0.192	0.251	.	-0.090615	NA	0.04	0.635116	0.822969	NA	0.862	NA	9.8828174
664	17	8161149	8161149	C	T	exonic	PFAS	NA	nonsynonymous SNV	PFAS:NM_012393:exon10:c.C1100T:p.P367L	exonic	ENSG00000178921	NA	nonsynonymous SNV	ENSG00000178921:ENST00000314666:exon10:c.C1100T:p.P367L	NA	NA	17p13.1	NA	NA	NA	NA	rs4791641	0.35	0.35	0.312	0.338858	0.5288	0.2272	0.3184	0.2292	0.4213	0.54	0.22	0.36	0.22	0.4346	0.54	0	D	0.0	B	0.004	B	0.001	N	0.000	P	1.575	L	1.04	T	-0.939	T	0.000	T	0.072	2.458	14.18	4.82	1.467	1.652	12.428	2.458258	2.458258	NA	0.488721	0.279165	NA	0.471	NA	9.8812124
664	11	5373497	5373497	G	C	exonic	OR51B6	NA	nonsynonymous SNV	OR51B6:NM_001004750:exon1:c.G760C:p.V254L	exonic	ENSG00000176239	NA	nonsynonymous SNV	ENSG00000176239:ENST00000380219:exon1:c.G760C:p.V254L	NA	NA	11p15.4	NA	NA	NA	NA	rs7106330	0.12	0.12	0.097	0.105431	0.1541	0.0754	0.1599	0.0303	0.1493	0.17	0.09	0.16	0.05	0.1462	0.17	0.04	D	0.082	B	0.098	B	0.031	N	0.999	P	-0.44	N	1.47	T	-1.065	T	0.000	T	0.187	1.757	11.83	3.98	1.272	-0.090	5.133	1.757108	1.757108	0.07	0.151966	0.054748	NA	0.167	NA	9.8810674
664	1	182026813	182026813	G	C	exonic	ZNF648	NA	nonsynonymous SNV	ZNF648:NM_001009992:exon2:c.C333G:p.N111K	exonic	ENSG00000179930	NA	nonsynonymous SNV	ENSG00000179930:ENST00000339948:exon2:c.C333G:p.N111K	NA	NA	1q25.3	NA	NA	NA	NA	rs12568050	0.17	0.17	0.163	0.176917	0.1471	0.2837	0.121	0.09	0.2546	0.15	0.28	0.11	0.12	0.1683	0.28	0.84	T	0.001	B	0.002	B	.	.	1.000	P	0	N	3.32	T	-0.937	T	0.000	T	0.021	0.178	4.957	-4.0	-1.686	-2.038	6.409	0.177723	NA	0.14	0.136977	0.097367	NA	0.196	NA	9.8809564
664	9	15784631	15784631	A	G	exonic	CCDC171	NA	nonsynonymous SNV	CCDC171:NM_173550:exon21:c.A3206G:p.K1069R	exonic	ENSG00000164989	NA	nonsynonymous SNV	ENSG00000164989:ENST00000297641:exon21:c.A3206G:p.K1069R,ENSG00000164989:ENST00000380701:exon21:c.A3206G:p.K1069R	Score=616;Name=lod=426	NA	9p22.3	NA	NA	NA	NA	rs1539172	0.44	0.44	0.457	0.474441	0.4742	0.3651	0.3703	0.5439	0.5675	0.48	0.35	0.39	0.54	0.4786	0.56	1	T	0.0	B	0.002	B	0.000	N	0.000	P	-0.145	N	-0.34	T	-0.945	T	0.000	T	0.181	-0.27	2.706	4.13	1.268	3.377	7.667	-0.269904	NA	1	0.499651	0.558356	NA	0.428	NA	9.8808824
664	10	129917560	129917560	T	C	exonic	MKI67	NA	nonsynonymous SNV	MKI67:NM_001145966:exon5:c.A311G:p.N104S,MKI67:NM_002417:exon5:c.A311G:p.N104S	exonic	ENSG00000148773	NA	nonsynonymous SNV	ENSG00000148773:ENST00000368653:exon5:c.A311G:p.N104S,ENSG00000148773:ENST00000368654:exon5:c.A311G:p.N104S	NA	NA	10q26.2	NA	NA	NA	NA	rs2071498	0.65	0.65	0.637	0.633986	0.665	0.6389	0.719	0.5802	0.6094	0.66	0.63	0.69	0.62	0.6476	0.69	.	.	0.982	D	0.702	P	0.256	N	1.000	P	0.695	N	5.13	T	-1.094	T	0.000	T	0.01	2.889	15.63	3.64	1.890	1.414	8.955	2.889073	2.889073	0.16	0.641279	0.564062	NA	0.522	NA	9.8794544
664	6	150240829	150240829	G	C	exonic	RAET1G	NA	nonsynonymous SNV	RAET1G:NM_001001788:exon2:c.C209G:p.T70R	exonic	ENSG00000203722	NA	nonsynonymous SNV	ENSG00000203722:ENST00000367360:exon2:c.C209G:p.T70R,ENSG00000203722:ENST00000367361:exon2:c.C209G:p.T70R,ENSG00000203722:ENST00000479265:exon2:c.C209G:p.T70R	NA	NA	6q25.1	NA	NA	NA	NA	rs9397449	0.23	0.23	0.208	0.226038	0.1501	0.5317	0.111	0.1021	0.2382	0.13	0.54	0.13	0.1	0.1724	0.54	1	T	0.059	B	0.066	B	.	.	1.000	P	0.895	L	6.13	T	-0.939	T	0.000	T	0.062	-0.347	2.358	-2.05	-0.955	-2.137	0.992	-0.34724	NA	0.1	0.131395	0.111666	NA	0.268	NA	9.8794384
664	11	100998771	100998771	C	G	exonic	PGR	NA	nonsynonymous SNV	PGR:NM_000926:exon1:c.G1031C:p.S344T,PGR:NM_001202474:exon1:c.G539C:p.S180T,PGR:NM_001271161:exon1:c.G539C:p.S180T	exonic	ENSG00000082175	NA	nonsynonymous SNV	ENSG00000082175:ENST00000263463:exon1:c.G1031C:p.S344T,ENSG00000082175:ENST00000325455:exon1:c.G1031C:p.S344T,ENSG00000082175:ENST00000526300:exon1:c.G1031C:p.S344T,ENSG00000082175:ENST00000528960:exon1:c.G1031C:p.S344T,ENSG00000082175:ENST00000534780:exon1:c.G1031C:p.S344T	Score=309;Name=lod=24	NA	11q22.1	NA	Name=E2F6,SUZ12,HA-E2F1	Name=14	NA	rs3740753	0.1	0.1	0.093	0.0720847	0.1769	0.0099	0.1398	0.0061	0.0695	0.19	0.01	0.15	0.01	0.1294	0.19	0.22	T	0.15	B	0.053	B	0.825	N	0.000	P	0.805	L	2.89	T	-0.937	T	0.000	T	0.064	0.674	7.606	1.76	0.816	-0.179	5.448	0.673794	NA	0	0.15006	0.025469	NA	0.065	NA	9.8769734
664	14	39556185	39556185	G	C	exonic	SEC23A	NA	nonsynonymous SNV	SEC23A:NM_006364:exon6:c.C631G:p.L211V	exonic	ENSG00000100934	NA	nonsynonymous SNV	ENSG00000100934:ENST00000537403:exon2:c.C25G:p.L9V,ENSG00000100934:ENST00000536508:exon5:c.C253G:p.L85V,ENSG00000100934:ENST00000545328:exon5:c.C544G:p.L182V,ENSG00000100934:ENST00000307712:exon6:c.C631G:p.L211V	Score=581;Name=lod=306	NA	14q21.1	Score=796;Name=V$MEF2_03	NA	NA	NA	rs8018720	0.78	0.78	0.781	0.778754	0.827	0.6488	0.7579	0.8638	0.7628	0.82	0.63	0.81	0.87	0.8042	0.88	0.64	T	0.0	B	0.0	B	0.000	N	0.000	P	0.835	L	-1.26	T	-0.966	T	0.000	T	0.046	0.997	9.072	4.77	1.433	2.531	12.047	0.997209	NA	0.82	0.826047	0.856332	NA	0.913	NA	9.8760864
665	9	140243968	140243968	C	T	exonic	EXD3	NA	nonsynonymous SNV	EXD3:NM_017820:exon15:c.G1510A:p.V504M	exonic	ENSG00000187609	NA	nonsynonymous SNV	ENSG00000187609:ENST00000340951:exon15:c.G1510A:p.V504M,ENSG00000187609:ENST00000342129:exon15:c.G550A:p.V184M	NA	NA	9q34.3	NA	NA	NA	NA	rs79140116	0.13	0.13	0.083	0.104633	0.1541	0.0427	0.2695	0.0507	0.0736	0.16	0.05	0.29	0.05	0.166	0.29	0.11	T	0.015	B	0.0	B	0.008	N	1.000	P	-0.375	N	-0.3	T	-1.108	T	0.000	T	0.023	-0.112	3.449	-5.44	-1.820	-1.924	1.161	-0.112483	NA	0.25	0.142041	0.060019	NA	0.058	NA	9.8711924
665	9	79320847	79320847	G	C	exonic	PRUNE2	NA	nonsynonymous SNV	PRUNE2:NM_015225:exon8:c.C6343G:p.Q2115E	exonic	ENSG00000106772	NA	nonsynonymous SNV	ENSG00000106772:ENST00000376718:exon8:c.C6343G:p.Q2115E,ENSG00000106772:ENST00000428286:exon8:c.C5266G:p.Q1756E	Score=289;Name=lod=20	NA	9q21.2	NA	NA	NA	NA	rs2077181	0.26	0.26	0.256	0.23762	0.1551	0.4653	0.1599	0.2103	0.18	0.15	0.5	0.14	0.22	0.1846	0.5	0.19	T	0.055	B	0.012	B	0.064	N	0.000	P	1.59	L	0.89	T	-0.940	T	0.000	T	0.158	-0.137	3.328	5.09	2.854	0.801	12.296	-0.137372	NA	0.25	0.123116	0.200255	NA	0.167	NA	9.8705174
665	22	46655948	46655948	T	C	exonic	PKDREJ	NA	nonsynonymous SNV	PKDREJ:NM_006071:exon1:c.A3272G:p.N1091S	exonic	ENSG00000130943	NA	nonsynonymous SNV	ENSG00000130943:ENST00000253255:exon1:c.A3272G:p.N1091S	NA	NA	22q13.31	NA	NA	NA	NA	rs6008384	0.22	0.22	0.245	0.245407	0.16	0.001	0.134	0.6785	0.0787	0.15	NA	0.15	0.63	0.1605	0.63	0.89	T	0.004	B	0.002	B	0.564	N	1.000	P	-0.95	N	1.31	T	-0.993	T	0.000	T	0.038	-1.216	0.065	-8.26	-1.777	-2.624	8.673	-1.215526	NA	0.77	0.146395	0.602814	NA	0.304	NA	9.8664384
666	15	90128966	90128966	C	T	exonic	TICRR	NA	nonsynonymous SNV	TICRR:NM_152259:exon4:c.C1204T:p.R402W	exonic	ENSG00000140534	NA	nonsynonymous SNV	ENSG00000140534:ENST00000268138:exon4:c.C1204T:p.R402W,ENSG00000140534:ENST00000560985:exon4:c.C1201T:p.R401W	Score=436;Name=lod=79	NA	15q26.1	Score=816;Name=V$PAX4_01	NA	NA	NA	rs11629584	0.38	0.38	0.369	0.361621	0.5129	0.2331	0.3775	0.2905	0.4233	0.51	0.26	0.43	0.27	0.4588	0.51	0.25	T	0.0	B	0.0	B	0.121	N	1.000	P	-1.87	N	2.68	T	-0.973	T	0.000	T	0.25	2.256	13.5	5.25	0.937	1.751	9.935	2.255768	2.255768	0.24	0.497337	0.333077	ID=COSM147976;OCCURENCE=1(stomach)	0.355	NA	9.8642964
666	1	223284599	223284599	T	C	exonic	TLR5	NA	nonsynonymous SNV	TLR5:NM_003268:exon6:c.A1775G:p.N592S	exonic	ENSG00000187554	NA	nonsynonymous SNV	ENSG00000187554:ENST00000342210:exon4:c.A1775G:p.N592S,ENSG00000187554:ENST00000540964:exon4:c.A1775G:p.N592S,ENSG00000187554:ENST00000366881:exon6:c.A1775G:p.N592S	NA	NA	1q41	NA	NA	NA	NA	rs2072493	0.17	0.17	0.145	0.140176	0.162	0.2728	0.2089	0.0045	0.1155	0.17	0.28	0.19	0.01	0.1487	0.28	0.76	T	0.0	B	0.0	B	0.001	N	1.000	P	0.155	N	1.91	T	-1.004	T	0.000	T	0.019	-1.858	0.009	-10.0	-1.542	-2.960	0.577	-1.85816	NA	0.77	0.159651	0.032683	ID=COSM146787;OCCURENCE=1(stomach)	0.109	CLINSIG=other;CLNDBN=Legionellosis;CLNREVSTAT=single;CLNACC=RCV000007039.1;CLNDSDB=MedGen:OMIM;CLNDSDBID=C1837872:608556	9.8629824
666	2	47251469	47251469	G	C	exonic	TTC7A	NA	nonsynonymous SNV	TTC7A:NM_020458:exon14:c.G1612C:p.V538L	exonic	ENSG00000068724	NA	nonsynonymous SNV	ENSG00000068724:ENST00000263737:exon13:c.G550C:p.V184L,ENSG00000068724:ENST00000319190:exon14:c.G1612C:p.V538L,ENSG00000068724:ENST00000394850:exon14:c.G1612C:p.V538L,ENSG00000068724:ENST00000409245:exon15:c.G1510C:p.V504L	Score=493;Name=lod=134	NA	2p21	NA	NA	NA	NA	rs2304290	0.27	0.27	0.259	0.270168	0.1332	0.6032	0.196	0.2156	0.1943	0.14	0.59	0.2	0.18	0.198	0.59	1	T	0.002	B	0.003	B	0.001	N	0.000	P	-1.18	N	0.99	T	-0.923	T	0.000	T	0.168	-1.344	0.029	2.57	0.626	1.360	1.978	-1.344233	NA	1	0.141279	0.228779	NA	0.203	NA	9.8608544
666	7	30795288	30795288	A	G	exonic	INMT	NA	nonsynonymous SNV	INMT:NM_001199219:exon3:c.A610G:p.M204V,INMT:NM_006774:exon3:c.A613G:p.M205V	exonic	ENSG00000241644	NA	nonsynonymous SNV	ENSG00000241644:ENST00000013222:exon3:c.A613G:p.M205V,ENSG00000241644:ENST00000409539:exon3:c.A610G:p.M204V	Score=346;Name=lod=34	NA	7p14.3	Score=874;Name=V$YY1_01	Name=CTCF	NA	NA	rs2302339	0.23	0.23	0.218	0.246406	0.3499	0.1677	0.245	0.1293	0.3804	0.36	0.16	0.26	0.12	0.2932	0.36	0.6	T	0.622	P	0.318	B	0.006	N	0.999	P	1.54	L	3.04	T	-0.922	T	0.000	T	0.211	1.317	10.32	1.28	0.137	0.540	6.598	1.317284	1.317284	0.07	0.329535	0.154108	ID=COSM1600335;OCCURENCE=1(central_nervous_system)	0.188	NA	9.8606984
666	17	51901643	51901643	C	T	exonic	KIF2B	NA	nonsynonymous SNV	KIF2B:NM_032559:exon1:c.C1249T:p.P417S	exonic	ENSG00000141200	NA	nonsynonymous SNV	ENSG00000141200:ENST00000268919:exon1:c.C1249T:p.P417S	Score=278;Name=lod=18	NA	17q22	Score=794;Name=V$MEIS1AHOXA9_01	NA	NA	NA	rs4561518	0.81	0.81	0.827	0.760184	0.834	0.8145	0.7608	0.789	0.589	0.84	0.8	0.77	0.8	0.7988	0.84	1	T	0.0	B	0.0	B	0.001	N	0.996	P	-2.16	N	-0.77	T	-0.940	T	0.000	T	0.058	-1.798	0.009	5.73	1.101	3.483	11.396	-1.797937	NA	1	0.84093	0.799818	NA	0.797	NA	9.8596034
666	3	125648283	125648283	A	G	exonic	ALG1L	NA	nonsynonymous SNV	ALG1L:NM_001015050:exon6:c.T476C:p.I159T,ALG1L:NM_001195223:exon7:c.T536C:p.I179T	exonic	ENSG00000189366	NA	nonsynonymous SNV	ENSG00000189366:ENST00000340333:exon6:c.T476C:p.I159T	NA	NA	3q21.2	NA	Name=CTCF_(SC-5916),CTCF,Rad21	Name=52	NA	rs3811679	0.23	0.23	0.174	0.232228	0.171	0.1071	0.1513	0.4796	0.1472	0.17	0.1	0.18	0.5	0.1549	0.5	0.7	T	0.0	B	0.0	B	0.248	N	1.000	P	-0.55	N	-0.51	T	-0.943	T	0.000	T	0.058	0.288	5.558	1.38	-0.062	-1.074	4.835	0.287738	NA	1	0.148515	0.35348	ID=COSM445491;OCCURENCE=1(breast)	0.029	NA	9.8589184
666	9	33385863	33385863	G	T	exonic	AQP7	NA	nonsynonymous SNV	AQP7:NM_001170:exon7:c.C527A:p.A176E	exonic	ENSG00000165269	NA	nonsynonymous SNV	ENSG00000165269:ENST00000447660:exon3:c.C131A:p.A44E,ENSG00000165269:ENST00000379503:exon4:c.C335A:p.A112E,ENSG00000165269:ENST00000439678:exon4:c.C251A:p.A84E,ENSG00000165269:ENST00000379506:exon5:c.C524A:p.A175E,ENSG00000165269:ENST00000379507:exon5:c.C524A:p.A175E,ENSG00000165269:ENST00000541274:exon5:c.C132A:p.S44R,ENSG00000165269:ENST00000377425:exon6:c.C356A:p.A119E,ENSG00000165269:ENST00000537089:exon6:c.C251A:p.A84E,ENSG00000165269:ENST00000297988:exon7:c.C527A:p.A176E,ENSG00000165269:ENST00000539936:exon7:c.C527A:p.A176E	Score=243;Name=lod=13	NA	9p13.3	NA	NA	NA	NA	rs62542746	NA	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4747	NA	0.08	T	0.002	B	0.023	B	0.011	N	1.000	P	.	.	-1.97	D	-1.063	T	0.021	T	0.752	0.971	8.961	1.57	0.051	2.102	7.453	0.970522	NA	0.05	NA	NA	NA	NA	NA	9.8586334
666	6	29911203	29911203	A	C	exonic	HLA-A	NA	nonsynonymous SNV	HLA-A:NM_001242758:exon3:c.A502C:p.K168Q,HLA-A:NM_002116:exon3:c.A502C:p.K168Q	exonic	ENSG00000206503	NA	nonsynonymous SNV	ENSG00000206503:ENST00000376802:exon3:c.A502C:p.K168Q,ENSG00000206503:ENST00000376806:exon3:c.A502C:p.K168Q,ENSG00000206503:ENST00000376809:exon3:c.A502C:p.K168Q,ENSG00000206503:ENST00000396634:exon5:c.A502C:p.K168Q	Score=366;Name=lod=41	NA	6p22.1	NA	Name=Pol2-4H8	Name=10	NA	rs1059517	0.29	0.29	0.318	0.339058	0.2356	0.2143	0.2853	0.5673	0.3037	0.2	0.22	0.29	0.53	0.2399	0.53	1	T	0.004	B	0.005	B	0.561	N	1.000	P	0.285	N	5.65	T	-1.002	T	0.001	T	0.286	-0.104	3.492	-1.26	-0.300	-0.840	13.840	-0.103622	NA	1	NA	NA	NA	0.159	NA	9.8578334
666	22	51011376	51011376	G	C	exonic	CPT1B	NA	nonsynonymous SNV	CPT1B:NM_001145134:exon10:c.C1178G:p.S393C,CPT1B:NM_001145137:exon10:c.C1280G:p.S427C,CPT1B:NM_001145135:exon11:c.C1280G:p.S427C,CPT1B:NM_004377:exon11:c.C1280G:p.S427C,CPT1B:NM_152245:exon11:c.C1280G:p.S427C,CPT1B:NM_152246:exon11:c.C1280G:p.S427C	exonic	ENSG00000205560	NA	nonsynonymous SNV	ENSG00000205560:ENST00000405237:exon10:c.C1280G:p.S427C,ENSG00000205560:ENST00000457250:exon10:c.C1178G:p.S393C,ENSG00000205560:ENST00000312108:exon11:c.C1280G:p.S427C,ENSG00000205560:ENST00000360719:exon11:c.C1280G:p.S427C,ENSG00000205560:ENST00000395650:exon11:c.C1280G:p.S427C,ENSG00000205560:ENST00000434492:exon13:c.C671G:p.S224C	NA	NA	22q13.33	NA	NA	NA	NA	rs8142477	0.36	0.36	0.361	0.422923	0.1143	0.501	0.2997	0.6679	0.4162	0.12	0.51	0.26	0.64	0.2447	0.64	0.21	T	0.0	B	0.005	B	0.362	N	1.000	P	0	N	-2.56	D	-1.035	T	0.000	T	0.059	-0.026	3.878	-5.54	-1.599	0.686	6.414	-0.026487	NA	0.13	0.116744	0.565365	NA	0.428	NA	9.8575894
666	22	45244930	45244930	C	T	exonic	ARHGAP8,PRR5-ARHGAP8	NA	synonymous SNV	ARHGAP8:NM_001198726:exon10:c.C867T:p.L289L,ARHGAP8:NM_181335:exon10:c.C867T:p.L289L,ARHGAP8:NM_001017526:exon11:c.C960T:p.L320L,PRR5-ARHGAP8:NM_181334:exon13:c.C1233T:p.L411L	exonic	ENSG00000241484,ENSG00000248405	NA	synonymous SNV	ENSG00000241484:ENST00000336963:exon10:c.C867T:p.L289L,ENSG00000241484:ENST00000356099:exon10:c.C867T:p.L289L,ENSG00000241484:ENST00000389774:exon11:c.C960T:p.L320L,ENSG00000248405:ENST00000361473:exon13:c.C1260T:p.L420L,ENSG00000241484:ENST00000389773:exon13:c.C1233T:p.L411L,ENSG00000248405:ENST00000352766:exon15:c.C1497T:p.L499L,ENSG00000241484:ENST00000517296:exon15:c.C1497T:p.L499L	NA	NA	22q13.31	Score=864;Name=V$IK3_01	NA	NA	NA	rs2269543	0.34	0.34	0.345	0.367212	0.2495	0.3105	0.2594	0.5915	0.32	0.24	0.33	0.28	0.53	0.2901	0.53	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.009	T	0.000	T	.	-0.376	2.23	-7.64	-1.448	-2.997	9.513	-0.376321	NA	NA	0.271047	0.533818	NA	0.37	NA	9.8560196
666	1	248224569	248224569	G	T	exonic	OR2L3	NA	nonsynonymous SNV	OR2L3:NM_001004687:exon1:c.G586T:p.G196C	exonic	ENSG00000198128	NA	nonsynonymous SNV	ENSG00000198128:ENST00000359959:exon1:c.G586T:p.G196C	NA	NA	1q44	NA	NA	NA	NA	rs71535241	NA	NA	0.321	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4776	0.022	0.16	T	0.004	B	0.009	B	0.425	N	1.000	P	0	N	8.74	T	-1.016	T	0.000	T	0.149	-0.623	1.236	-2.94	-0.962	-2.916	0.431	-0.622604	NA	0.17	NA	NA	NA	0.014	NA	9.8557334
667	3	118621664	118621664	C	A	exonic	IGSF11	NA	nonsynonymous SNV	IGSF11:NM_001015887:exon7:c.G999T:p.E333D,IGSF11:NM_152538:exon9:c.G996T:p.E332D	exonic	ENSG00000144847	NA	nonsynonymous SNV	ENSG00000144847:ENST00000393775:exon7:c.G999T:p.E333D,ENSG00000144847:ENST00000489689:exon7:c.G927T:p.E309D,ENSG00000144847:ENST00000491903:exon7:c.G915T:p.E305D,ENSG00000144847:ENST00000425327:exon8:c.G996T:p.E332D,ENSG00000144847:ENST00000354673:exon9:c.G996T:p.E332D,ENSG00000144847:ENST00000441144:exon9:c.G924T:p.E308D	Score=361;Name=lod=39	NA	3q13.32	NA	NA	NA	NA	rs36052974	0.22	0.22	0.212	0.263379	0.1292	0.1319	0.317	0.3775	0.3446	0.12	0.15	0.3	0.4	0.1997	0.4	0.58	T	0.002	B	0.006	B	0.248	N	0.870	P	0.205	N	-0.87	T	-1.033	T	0.000	T	0.043	0.7	7.735	3.46	0.787	3.961	8.814	0.700035	NA	0.52	0.149651	0.365411	NA	0.239	NA	9.8547824
667	8	10467652	10467652	G	C	exonic	RP1L1	NA	nonsynonymous SNV	RP1L1:NM_178857:exon4:c.C3956G:p.A1319G	exonic	ENSG00000183638	NA	nonsynonymous SNV	ENSG00000183638:ENST00000382483:exon4:c.C3956G:p.A1319G	NA	NA	8p23.1	NA	NA	NA	NA	rs4840501	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4793	0.34	1	T	0.0	B	0.0	B	0.138	N	1.000	N	.	.	3.99	T	-0.962	T	0.005	T	0.016	-0.752	0.812	-2.33	-1.592	-0.974	4.568	-0.751668	NA	1	NA	NA	NA	0.297	NA	9.8540334
667	8	144654249	144654249	G	A	exonic	MROH6	NA	nonsynonymous SNV	MROH6:NM_001100878:exon2:c.C401T:p.T134I	exonic	ENSG00000204839	NA	nonsynonymous SNV	ENSG00000204839:ENST00000398882:exon2:c.C401T:p.T134I,ENSG00000204839:ENST00000529971:exon2:c.C401T:p.T134I	NA	NA	8q24.3	Score=875;Name=V$GR_Q6	Name=ZNF263	Name=10	NA	rs10866911	0.38	0.38	0.327	0.320288	0.5229	0.3562	0.4135	0.1135	0.2883	0.53	0.32	0.49	0.13	0.4319	0.53	0.53	T	0.037	B	0.018	B	.	.	0.029	P	0.55	N	4.19	T	-0.915	T	0.000	T	0.128	2.854	15.51	-1.38	-0.139	1.349	6.138	2.853888	2.853888	0.24	0.525018	0.171216	NA	0.254	NA	9.8535154
667	17	28296327	28296327	T	G	exonic	EFCAB5	NA	nonsynonymous SNV	EFCAB5:NM_001145053:exon4:c.T541G:p.L181V,EFCAB5:NM_198529:exon4:c.T709G:p.L237V	exonic	ENSG00000176927	NA	nonsynonymous SNV	ENSG00000176927:ENST00000419434:exon1:c.T127G:p.L43V,ENSG00000176927:ENST00000320856:exon4:c.T709G:p.L237V,ENSG00000176927:ENST00000378738:exon4:c.T709G:p.L237V,ENSG00000176927:ENST00000394832:exon4:c.T709G:p.L237V,ENSG00000176927:ENST00000394835:exon4:c.T709G:p.L237V,ENSG00000176927:ENST00000440741:exon4:c.T709G:p.L237V,ENSG00000176927:ENST00000536908:exon4:c.T541G:p.L181V	Score=399;Name=lod=56	NA	17q11.2	NA	NA	NA	NA	rs9897794	0.55	0.55	0.544	0.542332	0.4622	0.7133	0.5677	0.444	0.5634	0.47	0.72	0.55	0.47	0.5288	0.72	0.6	T	0.0	B	0.0	B	0.050	N	0.000	P	-1.7	N	3.05	T	-1.020	T	0.000	T	0.048	0.218	5.176	5.32	1.390	3.577	13.330	0.21808	NA	0.3	0.489341	0.424185	NA	0.659	NA	9.8529924
667	3	125648209	125648209	C	T	exonic	ALG1L	NA	nonsynonymous SNV	ALG1L:NM_001015050:exon6:c.G550A:p.G184S,ALG1L:NM_001195223:exon7:c.G610A:p.G204S	exonic	ENSG00000189366	NA	nonsynonymous SNV	ENSG00000189366:ENST00000340333:exon6:c.G550A:p.G184S	NA	NA	3q21.2	NA	Name=CTCF_(SC-5916),Rad21,CTCF_(C-20),CTCF	Name=52	NA	rs3187686	0.22	0.22	0.242	0.231629	0.171	0.1071	0.1513	0.4773	0.1472	0.17	0.1	0.17	0.49	0.1558	0.49	0	D	0.007	B	0.001	B	.	.	1.000	P	0	N	-0.57	T	-0.960	T	0.000	T	0.034	2.677	14.91	0.603	0.206	0.241	3.862	2.676827	2.676827	0	0.154377	0.383772	NA	0.232	NA	9.8521564
667	18	56279025	56279025	T	G	exonic	ALPK2	NA	nonsynonymous SNV	ALPK2:NM_052947:exon2:c.A5C:p.K2T	exonic	ENSG00000198796	NA	nonsynonymous SNV	ENSG00000198796:ENST00000361673:exon2:c.A5C:p.K2T	Score=387;Name=lod=50	NA	18q21.32	NA	Name=CtBP2,YY1_(C-20),SP1,TCF4,GR,ERalpha_a,NANOG_(SC-33759)	Name=70	NA	rs6566987	0.92	0.92	0.925	0.940695	0.8231	1	0.9078	0.9826	0.9673	0.82	1	0.91	0.97	0.8647	1	1	T	0.0	B	0.0	B	.	.	1.000	P	-0.55	N	1.2	T	-0.956	T	0.000	T	0.027	-0.864	0.516	3.9	0.361	1.184	6.293	-0.864298	NA	0	0.793814	0.949698	NA	0.833	NA	9.8517194
667	6	30039240	30039240	G	T	exonic	RNF39	NA	nonsynonymous SNV	RNF39:NM_025236:exon4:c.C911A:p.A304E,RNF39:NM_170769:exon4:c.C911A:p.A304E	exonic	ENSG00000204618	NA	nonsynonymous SNV	ENSG00000204618:ENST00000244360:exon4:c.C911A:p.A304E,ENSG00000204618:ENST00000376751:exon4:c.C911A:p.A304E	NA	NA	6p22.1	NA	Name=CTCF,NANOG_(SC-33759)	Name=40	NA	rs2301753	0.18	0.18	0.187	0.191294	0.0954	0.1905	0.1744	0.2988	0.1575	0.09	0.2	0.2	0.3	0.2698	0.3	1	T	0.0	B	0.0	B	0.012	N	1.000	P	-1.245	N	0.03	T	-1.042	T	0.026	T	0.045	-0.576	1.41	4.54	0.706	0.703	9.819	-0.57564	NA	1	0.118094	0.250666	NA	0.145	NA	9.8500394
667	3	125648343	125648343	G	A	exonic	ALG1L	NA	nonsynonymous SNV	ALG1L:NM_001015050:exon6:c.C416T:p.S139L,ALG1L:NM_001195223:exon7:c.C476T:p.S159L	exonic	ENSG00000189366	NA	nonsynonymous SNV	ENSG00000189366:ENST00000340333:exon6:c.C416T:p.S139L	NA	NA	3q21.2	NA	NA	Name=52	NA	rs3187711	0.23	0.23	0.229	0.233826	0.171	0.1071	0.1556	0.4834	0.1472	0.17	0.1	0.18	0.49	0.157	0.49	0.49	T	0.959	D	0.194	B	0.000	N	0.999	P	1.28	L	-0.49	T	-0.883	T	0.000	T	0.103	-0.343	2.375	1.4	0.305	2.799	7.096	-0.343481	NA	0.41	0.155926	0.393508	ID=COSM445492;OCCURENCE=1(breast)	0.239	NA	9.8494074
667	6	132172368	132172368	A	C	exonic	ENPP1	NA	nonsynonymous SNV	ENPP1:NM_006208:exon4:c.A517C:p.K173Q	exonic	ENSG00000197594	NA	nonsynonymous SNV	ENSG00000197594:ENST00000360971:exon4:c.A517C:p.K173Q,ENSG00000197594:ENST00000513998:exon4:c.A517C:p.K173Q	NA	NA	6q23.2	NA	NA	NA	NA	rs1044498	0.29	0.29	0.307	0.342252	0.1332	0.0962	0.196	0.8835	0.183	0.12	0.11	0.16	0.87	0.2063	0.87	0.31	T	0.072	B	0.068	B	0.588	N	1.000	P	1.475	L	0.95	T	-1.082	T	0.051	T	0.07	1.611	11.34	3.39	0.174	1.966	14.335	1.610895	1.610895	0.14	0.144767	0.751248	NA	0.333	CLINSIG=other|other|other;CLNDBN=Insulin_resistance\x2c_susceptibility_to|Diabetes_mellitus_type_2|Obesity;CLNREVSTAT=single|single|single;CLNACC=RCV000014558.1|RCV000014559.1|RCV000033192.1;CLNDSDB=MedGen|MedGen:OMIM:SNOMED_CT|MedGen:OMIM:Orphanet:SNOMED_CT;CLNDSDBID=C1852091|C0011860:125853:44054006|C0028754:601665:ORPHA71529:414916001	9.8490664
667	11	99690428	99690428	T	G	exonic	CNTN5	NA	nonsynonymous SNV	CNTN5:NM_001243270:exon3:c.T209G:p.L70R,CNTN5:NM_001243271:exon4:c.T209G:p.L70R,CNTN5:NM_014361:exon4:c.T209G:p.L70R	exonic	ENSG00000149972	NA	nonsynonymous SNV	ENSG00000149972:ENST00000279463:exon2:c.T209G:p.L70R,ENSG00000149972:ENST00000528682:exon3:c.T209G:p.L70R,ENSG00000149972:ENST00000524871:exon4:c.T209G:p.L70R,ENSG00000149972:ENST00000527185:exon4:c.T209G:p.L70R	Score=343;Name=lod=33	NA	11q22.1	Score=918;Name=V$MZF1_02	NA	NA	NA	rs7125822	NA	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4849	0.076	0.46	T	0.0	B	0.0	B	0.154	N	0.000	P	-0.55	N	0.54	T	-1.035	T	0.054	T	0.404	-1.377	0.025	3.13	0.778	0.881	6.345	-1.377401	NA	1	NA	NA	NA	0.094	NA	9.8484334
668	21	39671476	39671476	G	A	exonic	KCNJ15	NA	nonsynonymous SNV	KCNJ15:NM_001276438:exon3:c.G293A:p.G98D,KCNJ15:NM_170736:exon3:c.G293A:p.G98D,KCNJ15:NM_170737:exon3:c.G293A:p.G98D,KCNJ15:NM_001276437:exon4:c.G293A:p.G98D,KCNJ15:NM_001276439:exon4:c.G293A:p.G98D,KCNJ15:NM_002243:exon4:c.G293A:p.G98D,KCNJ15:NM_001276435:exon5:c.G293A:p.G98D,KCNJ15:NM_001276436:exon5:c.G293A:p.G98D	exonic	ENSG00000157551	NA	nonsynonymous SNV	ENSG00000157551:ENST00000419868:exon2:c.G293A:p.G98D,ENSG00000157551:ENST00000398927:exon3:c.G293A:p.G98D,ENSG00000157551:ENST00000398934:exon3:c.G293A:p.G98D,ENSG00000157551:ENST00000398938:exon3:c.G293A:p.G98D,ENSG00000157551:ENST00000438657:exon3:c.G293A:p.G98D,ENSG00000157551:ENST00000328656:exon4:c.G293A:p.G98D,ENSG00000157551:ENST00000398928:exon4:c.G293A:p.G98D,ENSG00000157551:ENST00000398930:exon4:c.G293A:p.G98D,ENSG00000157551:ENST00000398932:exon4:c.G293A:p.G98D	NA	NA	21q22.13	NA	NA	NA	NA	rs2230033	0.33	0.33	0.311	0.288738	0.497	0.253	0.4625	0.0363	0.3292	0.5	0.28	0.46	0.05	0.4459	0.55	.	.	0.093	B	0.079	B	0.272	U	1.000	P	-0.405	N	-3.27	D	-0.943	T	0.000	T	0.39	-1.729	0.011	4.22	1.249	1.174	2.999	-1.728508	NA	0.36	0.547326	0.120971	NA	0.319	NA	9.8431074
668	17	45468858	45468858	T	G	exonic	EFCAB13	NA	stopgain	EFCAB13:NM_001195192:exon13:c.T1350G:p.Y450X,EFCAB13:NM_152347:exon15:c.T1638G:p.Y546X	exonic	ENSG00000178852	NA	stopgain	ENSG00000178852:ENST00000523842:exon3:c.T216G:p.Y72X,ENSG00000178852:ENST00000517484:exon13:c.T1350G:p.Y450X,ENSG00000178852:ENST00000331493:exon15:c.T1638G:p.Y546X	NA	NA	17q21.32	NA	NA	NA	NA	rs118004742	0.03	0.03	0.021	0.0231629	0.0547	NA	0.0634	0.0045	0.0112	0.04	NA	0.08	0.0041	0.0444	0.08	1	T	.	.	.	.	0.510	N	1.000	A	.	.	.	.	.	.	.	.	.	2.01	12.68	2.06	0.539	0.671	5.459	2.009891	2.009891	0.1	0.059446	0.014753	ID=COSM328408;OCCURENCE=1(pancreas)	0.007	NA	9.841454
668	6	30893941	30893941	G	A	exonic	VARS2	NA	nonsynonymous SNV	VARS2:NM_001167733:exon29:c.G2726A:p.R909Q,VARS2:NM_001167734:exon30:c.G3236A:p.R1079Q,VARS2:NM_020442:exon30:c.G3146A:p.R1049Q	exonic	ENSG00000137411	NA	nonsynonymous SNV	ENSG00000137411:ENST00000321897:exon29:c.G3146A:p.R1049Q,ENSG00000137411:ENST00000542001:exon29:c.G2726A:p.R909Q,ENSG00000137411:ENST00000416670:exon30:c.G3146A:p.R1049Q,ENSG00000137411:ENST00000541562:exon30:c.G3236A:p.R1079Q	NA	NA	6p21.33	NA	NA	NA	NA	rs4678	0.11	0.11	0.126	0.0904553	0.1551	0.0258	0.0663	0.0968	0.0992	0.17	0.03	0.07	0.14	0.1467	0.19	1	T	0.078	B	0.016	B	0.418	N	1.000	P	0.185	N	1.5	T	-1.046	T	0.009	T	0.092	0.127	4.681	-8.54	-1.624	-1.020	8.556	0.126566	NA	1	0.193388	0.121523	NA	0.145	NA	9.8381454
668	11	99690286	99690286	T	G	exonic	CNTN5	NA	nonsynonymous SNV	CNTN5:NM_001243270:exon3:c.T67G:p.S23A,CNTN5:NM_001243271:exon4:c.T67G:p.S23A,CNTN5:NM_014361:exon4:c.T67G:p.S23A	exonic	ENSG00000149972	NA	nonsynonymous SNV	ENSG00000149972:ENST00000279463:exon2:c.T67G:p.S23A,ENSG00000149972:ENST00000528682:exon3:c.T67G:p.S23A,ENSG00000149972:ENST00000524871:exon4:c.T67G:p.S23A,ENSG00000149972:ENST00000527185:exon4:c.T67G:p.S23A	Score=481;Name=lod=120	NA	11q22.1	NA	NA	NA	NA	rs10790978	NA	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4965	0.21	1	T	0.0	B	0.0	B	0.002	N	0.000	P	-0.55	N	0.72	T	-1.005	T	0.044	T	0.327	-1.707	0.011	4.28	0.875	3.780	10.378	-1.707129	NA	1	NA	NA	ID=COSM1476010,COSM430127;OCCURENCE=2(breast)	0.196	NA	9.8368334
668	19	37488499	37488499	T	C	exonic	ZNF568	NA	stoploss	ZNF568:NM_001204839:exon9:c.T1714C:p.X572R,ZNF568:NM_001204838:exon10:c.T1906C:p.X636R	exonic	ENSG00000198453	NA	stoploss	ENSG00000198453:ENST00000455427:exon9:c.T1714C:p.X572R	NA	NA	19q13.12	NA	NA	NA	NA	rs1667366	0.47	0.47	0.438	0.496805	0.5119	0.25	0.5346	0.6006	0.5685	0.52	0.26	0.52	0.61	0.6526	0.61	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	.	.	.	.	.	1.748	11.81	2.66	0.957	-1.955	7.157	1.748479	1.748479	0.62	NA	NA	NA	0.493	NA	9.8355
669	7	123514896	123514896	G	T	exonic	HYAL4	NA	nonsynonymous SNV	HYAL4:NM_012269:exon4:c.G1036T:p.A346S	exonic	ENSG00000106302	NA	nonsynonymous SNV	ENSG00000106302:ENST00000476325:exon3:c.G1036T:p.A346S,ENSG00000106302:ENST00000483878:exon3:c.G1036T:p.A346S,ENSG00000106302:ENST00000223026:exon4:c.G1036T:p.A346S	NA	NA	7q31.32	Score=845;Name=V$TST1_01	NA	NA	NA	rs6949082	0.11	0.11	0.103	0.113618	0.1779	0.001	0.0994	0.1293	0.1524	0.18	0.0017	0.1	0.16	0.1508	0.18	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-2.075	N	2.05	T	-0.988	T	0.000	T	0.028	-0.528	1.595	4.89	0.508	2.040	7.820	-0.528098	NA	0.87	0.170233	0.149796	NA	0.094	NA	9.8344004
669	18	56247600	56247600	C	A	exonic	ALPK2	NA	nonsynonymous SNV	ALPK2:NM_052947:exon4:c.G408T:p.R136S	exonic	ENSG00000198796	NA	nonsynonymous SNV	ENSG00000198796:ENST00000361673:exon4:c.G408T:p.R136S	NA	NA	18q21.32	NA	Name=SRF,USF-1	Name=47	NA	rs9944810	0.48	0.48	0.458	0.482827	0.5	0.6022	0.4755	0.3306	0.5532	0.49	0.62	0.49	0.28	0.5001	0.62	0.5	T	0.0	B	0.0	B	.	.	1.000	P	-0.345	N	1.1	T	-0.943	T	0.000	T	0.031	-0.705	0.956	-6.19	-1.702	-0.613	3.377	-0.704751	NA	0	0.499052	0.349716	NA	0.377	NA	9.8341814
669	7	142460369	142460369	G	A	exonic	PRSS1	NA	nonsynonymous SNV	PRSS1:NM_002769:exon4:c.G542A:p.S181N	exonic	ENSG00000204983	NA	nonsynonymous SNV	ENSG00000204983:ENST00000492062:exon3:c.G392A:p.S131N,ENSG00000204983:ENST00000311737:exon4:c.G542A:p.S181N,ENSG00000204983:ENST00000486171:exon5:c.G584A:p.S195N	NA	NA	7q34	NA	NA	NA	NA	rs201719096	NA	NA	0.318	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4997	NA	0.77	T	0.0	B	0.001	B	0.594	N	1.000	N	0.345	N	-1.52	D	-0.550	T	0.492	T	0.112	-2.362	0.004	-2.6	-0.627	-1.044	9.758	-2.362164	NA	1	NA	NA	NA	NA	NA	9.8336334
669	9	33387047	33387047	T	G	exonic	AQP7	NA	nonsynonymous SNV	AQP7:NM_001170:exon4:c.A188C:p.K63T	exonic	ENSG00000165269	NA	nonsynonymous SNV	ENSG00000165269:ENST00000379506:exon2:c.A185C:p.K62T,ENSG00000165269:ENST00000379507:exon2:c.A185C:p.K62T,ENSG00000165269:ENST00000377425:exon3:c.A17C:p.K6T,ENSG00000165269:ENST00000297988:exon4:c.A188C:p.K63T,ENSG00000165269:ENST00000539936:exon4:c.A188C:p.K63T	NA	NA	9p13.3	NA	NA	NA	NA	rs4008658	NA	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4998	NA	1	T	0.0	B	0.005	B	0.308	N	1.000	P	.	.	2.87	T	-0.707	T	0.242	T	0.155	-2.141	0.005	-4.79	-1.171	-1.519	4.817	-2.14074	NA	0.32	NA	NA	NA	NA	NA	9.8335334
669	9	118162670	118162670	C	A	exonic	DEC1	NA	nonsynonymous SNV	DEC1:NM_017418:exon6:c.C46A:p.P16T	exonic	ENSG00000173077	NA	nonsynonymous SNV	ENSG00000173077:ENST00000374016:exon6:c.C46A:p.P16T	NA	NA	9q33.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000008293	NA	0	D	0.722	P	0.156	B	.	.	1.000	N	.	.	0.19	T	-1.023	T	0.112	T	0.124	0.032	4.178	-1.37	-0.540	-0.199	6.563	0.031525	NA	NA	NA	NA	ID=COSM202034;OCCURENCE=1(large_intestine)	NA	NA	9.8333251
669	6	90368431	90368431	T	A	exonic	MDN1	NA	nonsynonymous SNV	MDN1:NM_014611:exon89:c.A14919T:p.E4973D	exonic	ENSG00000112159	NA	nonsynonymous SNV	ENSG00000112159:ENST00000369393:exon89:c.A14919T:p.E4973D,ENSG00000112159:ENST00000428876:exon89:c.A14919T:p.E4973D	Score=272;Name=lod=17	NA	6q15	NA	NA	NA	NA	rs139030773	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00004942	0.0005	0.36	T	0.759	P	0.202	B	0.000	D	0.668	N	1.1	L	3.8	T	-0.820	T	0.004	T	0.196	1.953	12.49	1.02	0.361	0.103	7.265	1.952733	1.952733	0.06	0.000116	0.000454	NA	NA	NA	9.833168
669	1	1650832	1650832	A	G	exonic	CDK11A,CDK11B	NA	nonsynonymous SNV	CDK11A:NM_024011:exon4:c.T290C:p.V97A,CDK11B:NM_033486:exon4:c.T290C:p.V97A,CDK11B:NM_033492:exon4:c.T290C:p.V97A,CDK11B:NM_033493:exon4:c.T290C:p.V97A,CDK11A:NM_033529:exon4:c.T290C:p.V97A,CDK11B:NM_033488:exon5:c.T188C:p.V63A,CDK11B:NM_033489:exon5:c.T188C:p.V63A	exonic	ENSG00000008128	NA	nonsynonymous SNV	ENSG00000008128:ENST00000356200:exon3:c.T188C:p.V63A,ENSG00000008128:ENST00000509982:exon3:c.T290C:p.V97A,ENSG00000008128:ENST00000357760:exon4:c.T290C:p.V97A,ENSG00000008128:ENST00000358779:exon4:c.T290C:p.V97A,ENSG00000008128:ENST00000378633:exon4:c.T290C:p.V97A,ENSG00000008128:ENST00000378635:exon4:c.T290C:p.V97A,ENSG00000008128:ENST00000378638:exon4:c.T188C:p.V63A,ENSG00000008128:ENST00000404249:exon4:c.T290C:p.V97A,ENSG00000008128:ENST00000460465:exon4:c.T290C:p.V97A,ENSG00000008128:ENST00000479362:exon4:c.T290C:p.V97A	Score=624;Name=lod=456	NA	1p36.33	NA	NA	NA	NA	rs72909030	0.5	0.5	0.48	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5011	0.5	0.96	T	0.033	B	0.018	B	0.107	N	1.000	P	-0.695	N	3.64	T	-0.923	T	0.000	T	0.175	0.676	7.618	4.12	0.513	5.802	9.081	0.67616	NA	0.66	NA	NA	NA	0.094	NA	9.8322334
669	10	46998894	46998894	G	A	exonic	GPRIN2	NA	nonsynonymous SNV	GPRIN2:NM_014696:exon3:c.G14A:p.R5H	exonic	ENSG00000204175	NA	nonsynonymous SNV	ENSG00000204175:ENST00000374314:exon1:c.G14A:p.R5H,ENSG00000204175:ENST00000374317:exon3:c.G14A:p.R5H	NA	NA	10q11.22	Score=778;Name=V$STAT5A_02	NA	NA	NA	rs3127817	0.51	0.51	NA	NA	NA	NA	NA	NA	NA	0.51	0.5	0.51	0.51	0.5019	0.51	0.42	T	0.004	B	0.002	B	0.835	N	1.000	N	0.51	N	4.04	T	-0.917	T	0.000	T	0.062	0.204	5.102	-10.4	-1.831	-1.881	5.079	0.20445	NA	1	NA	NA	ID=COSM427578;OCCURENCE=1(breast)	0.5	NA	9.8314334
669	1	161018422	161018422	C	G	exonic	ARHGAP30	NA	nonsynonymous SNV	ARHGAP30:NM_001025598:exon12:c.G2389C:p.D797H	exonic	ENSG00000186517	NA	nonsynonymous SNV	ENSG00000186517:ENST00000368015:exon8:c.G1858C:p.D620H,ENSG00000186517:ENST00000368013:exon12:c.G2389C:p.D797H	NA	NA	1q23.3	NA	NA	NA	NA	rs61733353	0.0032	0.0032	0.001	0.0081869	NA	NA	0.0029	0.0295	NA	NA	NA	0.01	0.01	0.0024	0.019	0.03	D	0.553	P	0.343	B	0.438	N	1.000	N	2.015	M	3.01	T	-1.021	T	0.037	T	0.089	0.369	6.003	0.756	0.282	-0.310	4.019	0.369047	NA	0.03	0.000116	0.018838	NA	0.007	NA	9.8308174
669	1	152382120	152382120	C	T	exonic	CRNN	NA	nonsynonymous SNV	CRNN:NM_016190:exon3:c.G1438A:p.G480S	exonic	ENSG00000143536	NA	nonsynonymous SNV	ENSG00000143536:ENST00000271835:exon3:c.G1438A:p.G480S	NA	NA	1q21.3	NA	NA	NA	NA	rs3829868	0.23	0.23	0.208	0.246805	0.1441	0.4315	0.3689	0.0635	0.3231	0.15	0.45	0.3	0.06	0.2071	0.45	0.03	D	0.18	B	0.079	B	0.078	N	1.000	P	1.115	L	3.01	T	-1.028	T	0.011	T	0.072	2.037	12.77	4.01	1.289	-0.082	8.987	2.037003	2.037003	0.37	0.151977	0.082388	NA	0.203	NA	9.8301564
669	20	24994289	24994289	C	T	exonic	ACSS1	NA	nonsynonymous SNV	ACSS1:NM_001252676:exon9:c.G1099A:p.V367M,ACSS1:NM_001252675:exon10:c.G1456A:p.V486M,ACSS1:NM_001252677:exon10:c.G1462A:p.V488M,ACSS1:NM_032501:exon10:c.G1462A:p.V488M	exonic	ENSG00000154930	NA	nonsynonymous SNV	ENSG00000154930:ENST00000537502:exon8:c.G1213A:p.V405M,ENSG00000154930:ENST00000542618:exon9:c.G1099A:p.V367M,ENSG00000154930:ENST00000323482:exon10:c.G1462A:p.V488M,ENSG00000154930:ENST00000432802:exon10:c.G1462A:p.V488M	NA	NA	20p11.21	NA	NA	NA	NA	rs6050249	0.18	0.18	0.179	0.163938	0.167	0.0595	0.1513	0.3064	0.0849	0.15	0.07	0.2	0.34	0.1553	0.34	0.03	D	0.19	B	0.082	B	0.842	N	0.000	P	1.64	L	0.43	T	-1.038	T	0.000	T	0.087	2.032	12.75	-10.6	-1.951	-2.494	2.233	2.03194	2.03194	0.04	0.181628	0.312755	ID=COSM443564;OCCURENCE=1(breast),1(large_intestine)	0.13	NA	9.8294054
669	7	89861832	89861832	G	A	exonic	STEAP2	NA	nonsynonymous SNV	STEAP2:NM_152999:exon5:c.G1367A:p.R456Q,STEAP2:NM_001040665:exon6:c.G1367A:p.R456Q,STEAP2:NM_001244944:exon6:c.G1367A:p.R456Q	exonic	ENSG00000157214	NA	nonsynonymous SNV	ENSG00000157214:ENST00000287908:exon5:c.G1367A:p.R456Q,ENSG00000157214:ENST00000394621:exon6:c.G1367A:p.R456Q,ENSG00000157214:ENST00000394622:exon6:c.G1367A:p.R456Q	Score=557;Name=lod=244	NA	7q21.13	NA	Name=p300	NA	NA	rs194524	0.36	0.36	0.324	0.329872	0.5119	0.1825	0.3862	0.2685	0.3374	0.52	0.19	0.4	0.29	0.466	0.53	0.1	T	0.003	B	0.006	B	0.001	N	0.000	P	2.14	M	3.47	T	-0.973	T	0.000	T	0.116	3.026	16.1	1.91	0.080	1.918	8.865	3.02615	3.02615	0.12	0.528262	0.325465	NA	0.42	NA	9.8271714
669	1	3329051	3329051	G	A	exonic	PRDM16	NA	nonsynonymous SNV	PRDM16:NM_022114:exon9:c.G2290A:p.V764M,PRDM16:NM_199454:exon9:c.G2290A:p.V764M	exonic	ENSG00000142611	NA	nonsynonymous SNV	ENSG00000142611:ENST00000509860:exon5:c.G1717A:p.V573M,ENSG00000142611:ENST00000270722:exon9:c.G2290A:p.V764M,ENSG00000142611:ENST00000378391:exon9:c.G2290A:p.V764M,ENSG00000142611:ENST00000441472:exon9:c.G2290A:p.V764M,ENSG00000142611:ENST00000442529:exon9:c.G2290A:p.V764M,ENSG00000142611:ENST00000511072:exon9:c.G2293A:p.V765M,ENSG00000142611:ENST00000514189:exon9:c.G2293A:p.V765M,ENSG00000142611:ENST00000378398:exon10:c.G2293A:p.V765M	Score=582;Name=lod=308	NA	1p36.32	NA	NA	NA	NA	rs149333409	0.0023	0.0023	0.002	0.000798722	0.003	NA	0.0014	NA	NA	0.01	NA	NA	NA	0.0012	0.01	0.07	T	0.8	P	0.259	B	0.071	U	0.920	N	1.87	L	3.45	T	-1.031	T	0.012	T	0.131	0.201	5.084	1.68	0.241	1.877	5.922	0.201188	NA	0.02	0.002402	0	NA	NA	NA	9.8267314
669	16	1544302	1544302	A	G	exonic	TELO2	NA	nonsynonymous SNV	TELO2:NM_016111:exon2:c.A20G:p.E7G	exonic	ENSG00000100726	NA	nonsynonymous SNV	ENSG00000100726:ENST00000262319:exon2:c.A20G:p.E7G,ENSG00000100726:ENST00000497339:exon2:c.A20G:p.E7G	NA	NA	16p13.3	NA	Name=ZNF263	NA	NA	rs2667661	0.26	0.26	0.087	0.28774	0.2416	0.5119	0.196	0.2345	0.2413	0.21	0.48	0.17	0.17	0.2521	0.48	0.39	T	0.0	B	0.0	B	0.741	N	1.000	P	0.345	N	2.42	T	-0.904	T	0.000	T	0.023	1.279	10.18	-7.1	-1.371	-0.276	3.174	1.2787	1.2787	0.43	0.01314	0.015007	NA	NA	NA	9.8264934
669	1	26596080	26596080	G	A	exonic	CEP85	NA	nonsynonymous SNV	CEP85:NM_022778:exon9:c.G1624A:p.A542T	exonic	ENSG00000130695	NA	nonsynonymous SNV	ENSG00000130695:ENST00000451429:exon8:c.G1471A:p.A491T,ENSG00000130695:ENST00000252992:exon9:c.G1624A:p.A542T,ENSG00000130695:ENST00000476272:exon9:c.G1624A:p.A542T	Score=490;Name=lod=131	NA	1p36.11	NA	NA	NA	NA	rs7550997	0.13	0.13	0.106	0.129393	0.1889	0.0228	0.1052	0.2027	0.0961	0.2	0.02	0.11	0.16	0.1515	0.2	0.31	T	0.001	B	0.002	B	0.098	N	0.998	P	1.1	L	2.82	T	-0.976	T	0.000	T	0.155	0.96	8.915	3.11	1.365	0.154	5.216	0.959619	NA	0.4	0.166512	0.159101	NA	0.094	NA	9.8264214
670	2	241463453	241463453	C	A	exonic	ANKMY1	NA	nonsynonymous SNV	ANKMY1:NM_017844:exon6:c.G991T:p.V331L,ANKMY1:NM_016552:exon7:c.G1414T:p.V472L	exonic	ENSG00000144504	NA	nonsynonymous SNV	ENSG00000144504:ENST00000405002:exon5:c.G724T:p.V242L,ENSG00000144504:ENST00000536462:exon5:c.G850T:p.V284L,ENSG00000144504:ENST00000361678:exon6:c.G991T:p.V331L,ENSG00000144504:ENST00000373318:exon6:c.G991T:p.V331L,ENSG00000144504:ENST00000373320:exon6:c.G724T:p.V242L,ENSG00000144504:ENST00000403283:exon6:c.G1228T:p.V410L,ENSG00000144504:ENST00000405523:exon6:c.G991T:p.V331L,ENSG00000144504:ENST00000272972:exon7:c.G1414T:p.V472L,ENSG00000144504:ENST00000391987:exon8:c.G1414T:p.V472L,ENSG00000144504:ENST00000401804:exon8:c.G1681T:p.V561L	NA	NA	2q37.3	NA	NA	NA	NA	rs3821348	0.15	0.15	0.145	0.163339	0.1769	0.0992	0.1412	0.1089	0.3047	0.2	0.11	0.15	0.13	0.1727	0.2	0.31	T	0.002	B	0.002	B	0.000	N	1.000	P	0.55	N	4.48	T	-1.105	T	0.000	T	0.119	-0.806	0.659	-8.12	-2.329	-2.542	11.640	-0.806463	NA	0.36	0.158953	0.115524	NA	0.123	NA	9.8247804
670	19	58213773	58213773	G	C	exonic	ZNF154	NA	nonsynonymous SNV	ZNF154:NM_001085384:exon3:c.C544G:p.L182V	exonic	ENSG00000179909	NA	nonsynonymous SNV	ENSG00000179909:ENST00000426889:exon3:c.C544G:p.L182V,ENSG00000179909:ENST00000451275:exon3:c.C544G:p.L182V,ENSG00000179909:ENST00000512439:exon3:c.C544G:p.L182V	NA	NA	19q13.43	NA	NA	NA	NA	rs2188736	0.15	0.15	0.154	0.124201	0.1948	0.0843	0.111	0.1589	0.0552	0.19	0.09	0.14	0.16	0.149	0.19	0.28	T	0.0	B	0.0	B	.	.	1.000	P	0.015	N	3.21	T	-0.914	T	0.000	T	0.024	2.178	13.24	-3.59	-1.235	-1.922	6.679	2.178466	2.178466	1	0.165385	0.148897	NA	0.13	NA	9.8241484
670	1	67279835	67279835	G	A	exonic	WDR78	NA	nonsynonymous SNV	WDR78:NM_024763:exon17:c.C2525T:p.S842F	exonic	ENSG00000152763	NA	nonsynonymous SNV	ENSG00000152763:ENST00000464352:exon12:c.C1724T:p.S575F,ENSG00000152763:ENST00000431318:exon16:c.C1664T:p.S555F,ENSG00000152763:ENST00000371026:exon17:c.C2525T:p.S842F	NA	NA	1p31.3	NA	NA	NA	NA	rs148734945	0.0027	0.0027	NA	0.000998403	0.004	NA	0.0014	NA	NA	0.0026	0.0017	0.01	NA	0.0019	0.01	0.03	D	0.498	P	0.153	B	0.335	N	1.000	N	0.345	N	0.35	T	-0.993	T	0.073	T	0.24	0.622	7.347	1.77	0.293	1.177	8.201	0.622068	NA	0.01	0.003505	0.000454	NA	0.007	NA	9.8239284
670	7	143632833	143632833	A	G	exonic	OR2F2	NA	nonsynonymous SNV	OR2F2:NM_001004685:exon1:c.A508G:p.T170A	exonic	ENSG00000221910	NA	nonsynonymous SNV	ENSG00000221910:ENST00000408955:exon1:c.A508G:p.T170A	NA	NA	7q35	Score=883;Name=V$AREB6_03	NA	NA	NA	rs13229174	0.11	0.11	0.108	0.102037	0.167	0.001	0.1239	0.1596	0.046	0.16	NA	0.14	0.16	0.1458	0.2	0.01	D	0.001	B	0.009	B	0.291	N	1.000	P	-0.59	N	1.22	T	-1.022	T	0.000	T	0.047	0.367	5.995	2.28	0.494	0.187	2.966	0.367465	NA	0.06	0.19814	0.164548	NA	0.159	NA	9.8223934
670	2	131688783	131688783	G	A	exonic	ARHGEF4	NA	nonsynonymous SNV	ARHGEF4:NM_015320:exon3:c.G253A:p.V85I,ARHGEF4:NM_032995:exon3:c.G253A:p.V85I	exonic	ENSG00000136002	NA	nonsynonymous SNV	ENSG00000136002:ENST00000409303:exon1:c.G253A:p.V85I,ENSG00000136002:ENST00000428230:exon2:c.G253A:p.V85I,ENSG00000136002:ENST00000438985:exon2:c.G793A:p.V265I,ENSG00000136002:ENST00000525839:exon2:c.G253A:p.V85I,ENSG00000136002:ENST00000326016:exon3:c.G253A:p.V85I,ENSG00000136002:ENST00000392953:exon3:c.G253A:p.V85I,ENSG00000136002:ENST00000409359:exon3:c.G2821A:p.V941I	NA	NA	2q21.1	NA	NA	NA	NA	rs61750360	0.12	0.12	0.121	0.139776	0.175	0.1319	0.0951	0.0378	0.2812	0.19	0.1	0.11	0.03	0.1643	0.19	0.22	T	0.213	B	0.016	B	.	.	1.000	P	0.805	L	0.96	T	-1.084	T	0.000	T	0.047	2.038	12.77	-6.62	-1.009	-1.771	0.049	2.037539	2.037539	0.11	0.172326	0.05901	NA	0.116	NA	9.8217074
670	14	68042574	68042574	A	G	exonic	PLEKHH1	NA	nonsynonymous SNV	PLEKHH1:NM_020715:exon16:c.A2204G:p.H735R	exonic	ENSG00000054690	NA	nonsynonymous SNV	ENSG00000054690:ENST00000329153:exon16:c.A2204G:p.H735R	NA	NA	14q24.1	NA	Name=CTCF	Name=18	NA	rs11158685	0.47	0.47	0.419	0.478634	0.496	0.4603	0.5648	0.3903	0.5378	0.5	0.47	0.55	0.36	0.5193	0.55	1	T	0.0	B	0.0	B	0.318	N	1.000	P	-1.575	N	2.02	T	-0.921	T	0.000	T	0.009	-1.665	0.012	-2.53	-0.977	-0.176	15.213	-1.664876	NA	1	0.497616	0.374635	NA	0.529	NA	9.8204174
670	1	152192555	152192555	T	C	exonic	HRNR	NA	nonsynonymous SNV	HRNR:NM_001009931:exon3:c.A1550G:p.Y517C	exonic	ENSG00000197915	NA	nonsynonymous SNV	ENSG00000197915:ENST00000368801:exon3:c.A1550G:p.Y517C	NA	NA	1q21.3	NA	NA	NA	NA	rs41266134	0.27	0.27	0.219	0.292332	0.1412	0.5962	0.3905	0.0242	0.4274	0.15	0.59	0.33	0.03	0.2286	0.59	0.18	T	0.003	B	0.001	B	.	.	1.000	P	0.345	N	4.67	T	-0.915	T	0.001	T	0.082	-0.243	2.829	-6.02	-1.875	-6.023	0.352	-0.243134	NA	0.17	0.144302	0.046754	NA	0.159	NA	9.8192314
670	1	152283283	152283283	C	T	exonic	FLG	NA	nonsynonymous SNV	FLG:NM_002016:exon3:c.G4079A:p.R1360H	exonic	ENSG00000143631	NA	nonsynonymous SNV	ENSG00000143631:ENST00000368799:exon3:c.G4079A:p.R1360H	NA	NA	1q21.3	NA	NA	NA	NA	rs11586631	0.23	0.23	0.168	0.28774	0.1421	0.5823	0.389	0.0144	0.4315	0.12	0.52	0.29	0.01	0.2289	0.52	0.55	T	0.406	B	0.051	B	.	.	1.000	P	0.895	L	4.85	T	-0.896	T	0.001	T	0.032	1.641	11.44	-7.56	-1.837	-6.306	1.394	1.640902	1.640902	0.24	0.143904	0.036995	NA	0.167	NA	9.8184294
670	14	93199080	93199080	C	T	exonic	LGMN	NA	nonsynonymous SNV	LGMN:NM_005606:exon2:c.G52A:p.V18I,LGMN:NM_001008530:exon3:c.G52A:p.V18I	exonic	ENSG00000100600	NA	nonsynonymous SNV	ENSG00000100600:ENST00000334869:exon2:c.G52A:p.V18I,ENSG00000100600:ENST00000553802:exon2:c.G52A:p.V18I,ENSG00000100600:ENST00000554189:exon2:c.G52A:p.V18I,ENSG00000100600:ENST00000555699:exon2:c.G52A:p.V18I,ENSG00000100600:ENST00000556097:exon2:c.G52A:p.V18I,ENSG00000100600:ENST00000557434:exon2:c.G52A:p.V18I,ENSG00000100600:ENST00000557609:exon2:c.G52A:p.V18I,ENSG00000100600:ENST00000393218:exon3:c.G52A:p.V18I,ENSG00000100600:ENST00000553371:exon3:c.G52A:p.V18I,ENSG00000100600:ENST00000553918:exon3:c.G52A:p.V18I,ENSG00000100600:ENST00000554397:exon3:c.G52A:p.V18I,ENSG00000100600:ENST00000554919:exon3:c.G52A:p.V18I,ENSG00000100600:ENST00000554080:exon4:c.G52A:p.V18I	NA	NA	14q32.12	NA	NA	NA	NA	rs2236264	0.19	0.19	0.176	0.233826	0.1571	0.2371	0.2118	0.326	0.2004	0.14	0.19	0.2	0.26	0.1934	0.3	0.5	T	0.005	B	0.001	B	0.085	N	1.000	P	1.43	L	0.93	T	-1.086	T	0.000	T	0.316	1.498	10.96	-9.35	-2.287	-2.629	2.485	1.498046	1.498046	0.18	0.164884	0.295733	NA	0.21	NA	9.8179494
670	17	39578424	39578424	G	T	exonic	KRT37	NA	nonsynonymous SNV	KRT37:NM_003770:exon5:c.C917A:p.A306D	exonic	ENSG00000108417	NA	nonsynonymous SNV	ENSG00000108417:ENST00000225550:exon5:c.C917A:p.A306D	Score=272;Name=lod=17	NA	17q21.2	NA	NA	NA	NA	rs2071607	0.17	0.17	0.141	0.172524	0.1759	0.3224	0.1268	0.0348	0.2331	0.18	0.31	0.13	0.04	0.1636	0.31	0.06	T	0.007	B	0.015	B	0.219	N	1.000	P	1.935	M	-2.66	D	-1.044	T	0.000	T	0.122	2.177	13.24	-1.33	0.077	0.732	3.523	2.177273	2.177273	0.1	0.176744	0.055606	NA	0.101	NA	9.8170894
670	8	144940230	144940230	G	C	exonic	EPPK1	NA	nonsynonymous SNV	EPPK1:NM_031308:exon1:c.C7192G:p.L2398V	exonic	ENSG00000227184	NA	nonsynonymous SNV	ENSG00000227184:ENST00000525985:exon2:c.C7192G:p.L2398V	NA	NA	8q24.3	NA	NA	NA	NA	rs7005697	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5168	0.27	0.34	T	0.0	B	0.001	B	.	.	1.000	N	.	.	-0.34	T	-0.993	T	0.144	T	0.095	-0.602	1.31	-8.45	-3.371	-2.023	11.446	-0.602381	NA	0.15	NA	NA	NA	0.275	NA	9.8165334
670	9	86258685	86258685	A	C	exonic	IDNK	NA	nonsynonymous SNV	IDNK:NM_001001551:exon5:c.A554C:p.K185T,IDNK:NM_001256915:exon5:c.A416C:p.K139T	exonic	ENSG00000148057	NA	nonsynonymous SNV	ENSG00000148057:ENST00000376419:exon5:c.A554C:p.K185T,ENSG00000148057:ENST00000454393:exon5:c.A683C:p.K228T,ENSG00000148057:ENST00000277124:exon6:c.A416C:p.K139T	NA	NA	9q21.32	NA	NA	NA	NA	rs1052690	0.1	0.1	0.076	0.0972444	0.1889	0.0337	0.1254	0.0189	0.1544	0.17	0.02	0.16	0.02	0.1428	0.19	0.09	T	0.072	B	0.142	B	0.453	N	1.000	P	0.725	N	1.58	T	-1.042	T	0.000	T	0.065	2.754	15.17	3.99	1.954	2.782	6.238	2.753549	2.753549	0.01	0.185625	0.041401	NA	0.225	NA	9.8160084
671	11	5602615	5602615	A	G	exonic	OR52B6	NA	nonsynonymous SNV	OR52B6:NM_001005162:exon1:c.A509G:p.H170R	exonic	ENSG00000187747	NA	nonsynonymous SNV	ENSG00000187747:ENST00000345043:exon1:c.A509G:p.H170R	NA	NA	11p15.4	NA	Name=CEBPB	NA	NA	rs2341434	0.69	0.69	0.695	0.716653	0.4761	0.9802	0.67	0.7413	0.6922	0.47	0.97	0.63	0.72	0.5746	0.97	1	T	0.0	B	0.0	B	0.024	N	0.354	P	-3.525	N	1.26	T	-0.957	T	0.000	T	0.055	-2.09	0.006	5.15	1.413	1.843	9.936	-2.090174	NA	1	0.467877	0.696274	NA	0.616	NA	9.8147564
671	1	228486404	228486404	C	T	exonic	OBSCN	NA	nonsynonymous SNV	OBSCN:NM_001271223:exon49:c.C13196T:p.T4399M	exonic	ENSG00000154358	NA	nonsynonymous SNV	ENSG00000154358:ENST00000366707:exon44:c.C3266T:p.T1089M,ENSG00000154358:ENST00000570156:exon49:c.C13196T:p.T4399M	NA	NA	1q42.13	NA	NA	NA	NA	rs56021350	0.17	0.17	0.159	0.165935	0.1581	0.1518	0.2378	0.1982	0.0941	0.16	0.15	0.23	0.17	0.1835	0.23	0.23	T	.	.	.	.	.	.	1.000	P	.	.	-0.36	T	-1.017	T	0.000	T	0.271	0.912	8.711	-4.67	-1.387	-2.459	12.656	0.911956	NA	0.12	0.178805	0.229452	ID=COSM425517,COSM1473524,COSM425518;OCCURENCE=1(breast)	0.167	NA	9.8129284
671	5	135392426	135392426	T	C	exonic	TGFBI	NA	synonymous SNV	TGFBI:NM_000358:exon12:c.T1620C:p.F540F	exonic	ENSG00000120708	NA	synonymous SNV	ENSG00000120708:ENST00000305126:exon12:c.T1620C:p.F540F,ENSG00000120708:ENST00000442011:exon12:c.T1620C:p.F540F	Score=426;Name=lod=72	NA	5q31.1	Score=771;Name=V$E2F_01	NA	NA	NA	rs4669	0.39	0.39	0.398	0.420527	0.2584	0.3433	0.3703	0.6687	0.3671	0.27	0.34	0.35	0.67	0.3312	0.67	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.004	T	0.000	T	.	1.138	9.636	-2.69	-1.131	-0.359	14.514	1.137809	NA	NA	0.270183	0.598273	NA	0.377	NA	9.8068836
671	7	47913579	47913579	T	C	exonic	PKD1L1	NA	nonsynonymous SNV	PKD1L1:NM_138295:exon24:c.A3814G:p.K1272E	exonic	ENSG00000158683	NA	nonsynonymous SNV	ENSG00000158683:ENST00000289672:exon24:c.A3814G:p.K1272E	NA	NA	7p12.3	Score=867;Name=V$TAL1ALPHAE47_01	NA	Name=67	NA	rs1470859	0.89	0.89	0.907	0.91853	0.83	0.9742	0.9121	0.9849	0.8671	0.79	0.98	0.86	0.93	0.8688	0.98	0.3	T	0.0	B	0.0	B	0.007	N	1.000	P	0.205	N	-0.56	T	-0.973	T	0.000	T	0.034	-2.071	0.006	-9.08	-1.865	-1.957	4.848	-2.070591	NA	0.59	0.827791	0.959374	NA	0.609	NA	9.8067424
672	15	50782703	50782703	A	G	exonic	USP8	NA	nonsynonymous SNV	USP8:NM_001128610:exon14:c.A2215G:p.T739A,USP8:NM_005154:exon14:c.A2215G:p.T739A,USP8:NM_001128611:exon15:c.A2215G:p.T739A	exonic	ENSG00000138592	NA	nonsynonymous SNV	ENSG00000138592:ENST00000425032:exon11:c.A1897G:p.T633A,ENSG00000138592:ENST00000307179:exon14:c.A2215G:p.T739A,ENSG00000138592:ENST00000396444:exon14:c.A2215G:p.T739A,ENSG00000138592:ENST00000433963:exon15:c.A2215G:p.T739A	NA	NA	15q21.2	NA	NA	NA	NA	rs11638390	0.11	0.11	0.089	0.115415	0.1789	0.002	0.2406	0.0265	0.1984	0.17	NA	0.24	0.04	0.1675	0.24	0.51	T	0.0	B	0.001	B	0.819	N	1.000	P	-0.205	N	4.38	T	-0.911	T	0.000	T	0.021	-1.119	0.126	-6.61	-1.515	-1.084	8.103	-1.118975	NA	0.43	0.18293	0.050319	NA	0.13	NA	9.8040034
672	1	184764740	184764740	C	T	exonic	FAM129A	NA	nonsynonymous SNV	FAM129A:NM_052966:exon14:c.G2158A:p.V720M	exonic	ENSG00000135842	NA	nonsynonymous SNV	ENSG00000135842:ENST00000367511:exon14:c.G2158A:p.V720M	NA	NA	1q25.3	NA	NA	NA	NA	rs17313374	0.0046	0.0046	0.003	0.00339457	0.0099	NA	0.0058	NA	0.0031	0.01	NA	0.01	NA	0.007	0.013	0.11	T	0.593	P	0.038	B	0.339	N	1.000	N	0.695	N	2.39	T	-1.060	T	0.014	T	0.018	2.877	15.59	-3.8	-0.611	-1.543	12.110	2.877144	2.877144	0.02	0.013023	0.001135	NA	NA	NA	9.8034104
672	17	8216468	8216468	T	C	exonic	ARHGEF15	NA	nonsynonymous SNV	ARHGEF15:NM_025014:exon3:c.T830C:p.L277P,ARHGEF15:NM_173728:exon3:c.T830C:p.L277P	exonic	ENSG00000198844	NA	nonsynonymous SNV	ENSG00000198844:ENST00000581809:exon1:c.T110C:p.L37P,ENSG00000198844:ENST00000421050:exon2:c.T830C:p.L277P,ENSG00000198844:ENST00000361926:exon3:c.T830C:p.L277P	Score=385;Name=lod=49	NA	17p13.1	NA	NA	NA	NA	rs871841	0.62	0.62	0.64	0.621006	0.4761	0.7431	0.6758	0.7186	0.4734	0.47	0.74	0.62	0.73	0.5541	0.74	1	T	0.0	B	0.0	B	0.000	N	0.529	P	-0.895	N	1.36	T	-0.965	T	0.000	T	0.101	0.583	7.148	5.13	1.409	1.477	9.673	0.583117	NA	0.52	0.500116	0.687018	NA	0.522	NA	9.8030174
672	2	233834975	233834975	A	G	exonic	NGEF	NA	nonsynonymous SNV	NGEF:NM_019850:exon3:c.T332C:p.M111T	exonic	ENSG00000066248	NA	nonsynonymous SNV	ENSG00000066248:ENST00000264051:exon3:c.T332C:p.M111T	NA	NA	2q37.1	NA	Name=ERalpha_a	Name=13	NA	rs4973588	0.88	0.88	0.851	0.842452	0.8459	0.8433	0.8963	0.9312	0.68	0.85	0.85	0.9	0.93	0.8427	0.93	0.61	T	0.0	B	0.0	B	0.003	N	1.000	P	0.55	N	-0.19	T	-1.022	T	0.000	T	0.242	-2.385	0.004	-7.42	-2.223	-1.327	5.422	-2.38465	NA	0.23	0.845581	0.916478	NA	0.862	NA	9.7991524
672	11	56468212	56468212	G	A	exonic	OR9G1,OR9G9	NA	nonsynonymous SNV	OR9G1:NM_001005213:exon1:c.G349A:p.V117M,OR9G9:NM_001013358:exon1:c.G349A:p.V117M	exonic	ENSG00000174914	NA	nonsynonymous SNV	ENSG00000174914:ENST00000312153:exon1:c.G349A:p.V117M	Score=472;Name=lod=110	NA	11q12.1	NA	NA	NA	NA	rs591369	NA	NA	0.349	0.0119808	0.0328	0.001	0.0216	0.0015	0.0092	NA	NA	NA	NA	0.5017	0.42	1	T	0.0	B	0.0	B	0.000	N	1.000	N	-3.75	N	5.7	T	-0.942	T	0.000	T	0.248	-1.106	0.138	4.54	0.860	5.268	10.193	-1.105975	NA	1	NA	NA	NA	0.449	NA	9.7988334
672	1	232564297	232564297	T	A	exonic	SIPA1L2	NA	nonsynonymous SNV	SIPA1L2:NM_020808:exon15:c.A4270T:p.M1424L	exonic	ENSG00000116991	NA	nonsynonymous SNV	ENSG00000116991:ENST00000308942:exon9:c.A1492T:p.M498L,ENSG00000116991:ENST00000262861:exon15:c.A4270T:p.M1424L,ENSG00000116991:ENST00000366630:exon16:c.A4270T:p.M1424L	Score=295;Name=lod=21	NA	1q42.2	NA	NA	Name=2	NA	rs3210731	0.1	0.1	0.099	0.0938498	0.1909	0.003	0.1801	0.0371	0.1033	0.18	NA	0.18	0.04	0.1534	0.19	0.36	T	0.0	B	0.0	B	0.093	N	0.976	P	0.69	N	1.6	T	-0.998	T	0.000	T	0.058	1.744	11.79	2.18	0.114	0.529	2.251	1.7436	1.7436	0.09	0.191946	0.068017	NA	0.116	NA	9.7970874
672	3	124732618	124732618	A	G	exonic	HEG1	NA	nonsynonymous SNV	HEG1:NM_020733:exon6:c.T1805C:p.F602S	exonic	ENSG00000173706	NA	nonsynonymous SNV	ENSG00000173706:ENST00000311127:exon6:c.T1805C:p.F602S	Score=259;Name=lod=15	NA	3q21.2	NA	NA	NA	NA	rs6790837	0.44	0.44	0.41	0.441094	0.5358	0.4673	0.4409	0.2269	0.6063	0.55	0.48	0.44	0.23	0.4975	0.55	0.94	T	0.0	B	0.0	B	.	.	1.000	P	-1.61	N	-2.16	D	-0.968	T	0.000	T	0.066	-0.85	0.549	3.35	0.750	2.578	9.274	-0.850305	NA	0.83	0.504916	0.255255	NA	0.355	NA	9.7951174
673	16	70690989	70690989	G	C	exonic	IL34	NA	nonsynonymous SNV	IL34:NM_001172771:exon5:c.G364C:p.E122Q,IL34:NM_001172772:exon5:c.G367C:p.E123Q,IL34:NM_152456:exon5:c.G367C:p.E123Q	exonic	ENSG00000157368	NA	nonsynonymous SNV	ENSG00000157368:ENST00000288098:exon4:c.G367C:p.E123Q,ENSG00000157368:ENST00000566361:exon4:c.G292C:p.E98Q,ENSG00000157368:ENST00000429149:exon5:c.G367C:p.E123Q	NA	NA	16q22.1	NA	Name=CTCF_(SC-5916),CTCF,Rad21	NA	NA	rs8046424	0.65	0.65	0.645	0.715056	0.4742	0.6687	0.5994	0.9826	0.7311	0.46	0.69	0.56	0.97	0.5764	0.97	0.9	T	0.0	B	0.0	B	0.374	N	1.000	P	-1.04	N	0.93	T	-0.976	T	0.000	T	0.017	1.319	10.33	3.04	1.197	1.221	2.441	1.319045	1.319045	0.59	0.488256	0.900364	NA	0.645	NA	9.7944774
673	3	112063850	112063850	C	A	exonic	CD200	NA	nonsynonymous SNV	CD200:NM_005944:exon3:c.C136A:p.P46T,CD200:NM_001004196:exon4:c.C211A:p.P71T	exonic	ENSG00000091972	NA	nonsynonymous SNV	ENSG00000091972:ENST00000606471:exon2:c.C49A:p.P17T,ENSG00000091972:ENST00000315711:exon3:c.C136A:p.P46T,ENSG00000091972:ENST00000498096:exon3:c.C136A:p.P46T,ENSG00000091972:ENST00000607597:exon3:c.C115A:p.P39T,ENSG00000091972:ENST00000473539:exon4:c.C211A:p.P71T	Score=346;Name=lod=34	NA	3q13.2	NA	NA	NA	NA	rs2272022	0.24	0.24	0.229	0.202476	0.3907	0.1359	0.2709	0.1188	0.1421	0.39	0.11	0.26	0.12	0.2841	0.39	0.73	T	0.513	P	0.147	B	0.006	N	0.000	P	0.41	N	1.83	T	-0.943	T	0.000	T	0.088	0.068	4.367	4.19	0.831	0.953	7.310	0.067615	NA	0.71	0.365233	0.142079	NA	0.275	NA	9.7933004
673	6	43418733	43418733	G	A	exonic	DLK2	NA	synonymous SNV	DLK2:NM_023932:exon6:c.C696T:p.H232H,DLK2:NM_206539:exon6:c.C696T:p.H232H	exonic	ENSG00000171462	NA	synonymous SNV	ENSG00000171462:ENST00000357338:exon6:c.C696T:p.H232H,ENSG00000171462:ENST00000372485:exon6:c.C678T:p.H226H,ENSG00000171462:ENST00000372488:exon6:c.C696T:p.H232H,ENSG00000171462:ENST00000414245:exon6:c.C678T:p.H226H	Score=464;Name=lod=103	NA	6p21.1	Score=794;Name=V$PAX5_02	NA	NA	NA	rs1214749	0.26	0.26	0.288	0.278954	0.2863	0.0804	0.2147	0.5424	0.1656	0.27	0.07	0.22	0.5	0.2775	0.5	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.032	T	0.043	T	.	0.048	4.262	-5.77	-1.278	-0.286	9.454	0.04777	NA	NA	0.311047	0.502951	NA	0.312	NA	9.7918196
673	20	44469290	44469290	G	A	exonic	SNX21	NA	nonsynonymous SNV	SNX21:NM_033421:exon4:c.G460A:p.A154T,SNX21:NM_152897:exon4:c.G460A:p.A154T	exonic	ENSG00000124104	NA	nonsynonymous SNV	ENSG00000124104:ENST00000372542:exon3:c.G433A:p.A145T,ENSG00000124104:ENST00000342644:exon4:c.G460A:p.A154T,ENSG00000124104:ENST00000491381:exon4:c.G460A:p.A154T	Score=496;Name=lod=138	NA	20q13.12	Score=858;Name=V$PAX4_01	NA	NA	NA	rs4638862	0.4	0.4	0.394	0.35024	0.5298	0.4276	0.5202	0.0658	0.3497	0.55	0.44	0.48	0.07	0.4789	0.55	0.39	T	0.05	B	0.013	B	0.028	N	0.000	P	.	.	1.65	T	-0.925	T	0.000	T	0.082	0.947	8.862	2.39	0.473	1.246	3.931	0.947087	NA	0.41	0.533256	0.157059	NA	0.348	NA	9.7913774
673	20	31622083	31622083	G	A	exonic	BPIFB6	NA	nonsynonymous SNV	BPIFB6:NM_174897:exon3:c.G289A:p.V97I	exonic	ENSG00000167104	NA	nonsynonymous SNV	ENSG00000167104:ENST00000349552:exon3:c.G289A:p.V97I	Score=443;Name=lod=84	NA	20q11.21	Score=805;Name=V$PAX5_02	NA	NA	NA	rs2070317	0.57	0.57	0.55	0.569089	0.5179	0.7579	0.5303	0.4592	0.6033	0.52	0.75	0.5	0.49	0.5157	0.75	0.8	T	0.001	B	0.001	B	0.001	N	1.000	P	-1.89	N	3.66	T	-1.039	T	0.000	T	0.042	0.086	4.462	4.7	0.649	2.180	7.220	0.08567	NA	1	0.510349	0.445302	NA	0.543	NA	9.7893844
674	9	136029645	136029645	G	T	exonic	GBGT1	NA	stopgain	GBGT1:NM_021996:exon7:c.C363A:p.Y121X	exonic	ENSG00000148288	NA	stopgain	ENSG00000148288:ENST00000540636:exon6:c.C312A:p.Y104X,ENSG00000148288:ENST00000372040:exon7:c.C363A:p.Y121X	Score=355;Name=lod=37	NA	9q34.2	NA	NA	NA	NA	rs35898523	0.05	0.05	0.055	0.0429313	0.0815	0.002	0.0418	0.034	0.0583	0.09	0.0035	0.04	0.05	0.0615	0.09	0.94	T	.	.	.	.	.	.	1.000	D	.	.	1.27	T	-1.117	T	0.004	T	.	3.367	17.35	1.47	0.008	0.687	6.090	3.367115	3.367115	NA	0.07314	0.045166	NA	0.029	NA	9.78386
674	1	180243524	180243524	A	G	exonic	LHX4	NA	nonsynonymous SNV	LHX4:NM_033343:exon6:c.A983G:p.N328S	exonic	ENSG00000121454	NA	nonsynonymous SNV	ENSG00000121454:ENST00000263726:exon6:c.A983G:p.N328S	Score=793;Name=lod=2223	NA	1q25.2	NA	NA	NA	NA	rs7536561	0.45	0.45	0.422	0.426318	0.5487	0.5942	0.3256	0.1165	0.6176	0.58	0.6	0.35	0.12	0.485	0.6	1	T	0.0	B	0.0	B	0.000	N	0.000	P	0.235	N	-2.24	D	-0.956	T	0.000	T	0.033	-0.197	3.045	3.27	0.377	2.529	6.920	-0.196658	NA	0.75	0.516047	0.204948	NA	0.471	NA	9.7835864
674	19	44418693	44418693	T	C	exonic	ZNF45	NA	nonsynonymous SNV	ZNF45:NM_003425:exon10:c.A895G:p.T299A	exonic	ENSG00000124459	NA	nonsynonymous SNV	ENSG00000124459:ENST00000589703:exon4:c.A895G:p.T299A,ENSG00000124459:ENST00000269973:exon10:c.A895G:p.T299A	Score=383;Name=lod=48	NA	19q13.31	NA	Name=SETDB1	NA	NA	rs388706	0.57	0.57	0.545	0.525359	0.5169	0.7996	0.6499	0.3336	0.4223	0.51	0.82	0.58	0.38	0.5272	0.82	0.07	T	0.0	B	0.002	B	0.028	N	1.000	P	1.49	L	1.73	T	-0.903	T	0.000	T	0.015	-0.384	2.197	-2.16	-1.254	-0.211	6.297	-0.383998	NA	0.04	0.50593	0.358148	NA	0.5	NA	9.7833034
674	2	47382342	47382342	G	T	exonic	C2orf61	NA	nonsynonymous SNV	C2orf61:NM_001163561:exon1:c.C49A:p.L17M,C2orf61:NM_173649:exon1:c.C49A:p.L17M	exonic	ENSG00000239605	NA	nonsynonymous SNV	ENSG00000239605:ENST00000294947:exon1:c.C49A:p.L17M,ENSG00000239605:ENST00000445927:exon1:c.C49A:p.L17M	NA	NA	2p21	NA	Name=Pol2	NA	NA	rs815804	0.16	0.16	0.164	0.126597	0.1819	0.1458	0.1297	0.1021	0.0808	0.19	0.15	0.13	0.13	0.1656	0.2	0.03	D	0.911	P	0.474	P	.	.	1.000	P	0.69	N	1.03	T	-1.042	T	0.000	T	0.084	1.69	11.61	0.373	0.057	-0.363	11.525	1.689502	1.689502	0	0.203837	0.135497	NA	0.101	NA	9.7819964
674	4	6596360	6596360	G	A	exonic	MAN2B2	NA	nonsynonymous SNV	MAN2B2:NM_015274:exon7:c.G958A:p.V320M	exonic	ENSG00000013288	NA	nonsynonymous SNV	ENSG00000013288:ENST00000285599:exon7:c.G958A:p.V320M,ENSG00000013288:ENST00000504248:exon7:c.G805A:p.V269M	Score=387;Name=lod=50	NA	4p16.1	Score=839;Name=V$CHOP_01	NA	NA	NA	rs2301795	0.47	0.47	0.468	0.455471	0.5388	0.3879	0.4755	0.4387	0.4479	0.53	0.38	0.47	0.47	0.4951	0.53	0.16	T	0.407	B	0.33	B	0.014	N	0.970	P	1.685	L	-1.04	T	-0.923	T	0.000	T	0.324	0.522	6.829	2.76	0.341	3.562	8.097	0.522162	NA	0.25	0.518023	0.438039	NA	0.543	NA	9.7814104
674	22	45258324	45258324	C	T	exonic	ARHGAP8,PRR5-ARHGAP8	NA	nonsynonymous SNV	ARHGAP8:NM_181335:exon12:c.C1151T:p.P384L,ARHGAP8:NM_001017526:exon13:c.C1244T:p.P415L,PRR5-ARHGAP8:NM_181334:exon15:c.C1517T:p.P506L	exonic	ENSG00000241484,ENSG00000248405	NA	nonsynonymous SNV	ENSG00000241484:ENST00000356099:exon12:c.C1151T:p.P384L,ENSG00000241484:ENST00000389774:exon13:c.C1244T:p.P415L,ENSG00000248405:ENST00000361473:exon15:c.C1544T:p.P515L,ENSG00000241484:ENST00000389773:exon15:c.C1517T:p.P506L,ENSG00000248405:ENST00000352766:exon17:c.C1781T:p.P594L,ENSG00000241484:ENST00000517296:exon17:c.C1781T:p.P594L	NA	NA	22q13.31	NA	NA	NA	NA	rs2071762	0.21	0.21	0.195	0.22504	0.1759	0.3145	0.2493	0.0976	0.3384	0.17	0.35	0.26	0.09	0.2187	0.35	0.29	T	0.355	B	0.031	B	0.396	N	0.031	P	1.245	L	2.16	T	-1.057	T	0.000	T	0.564	0.674	7.606	-7.34	-2.296	-1.175	9.202	0.673888	NA	0.28	0.157791	0.110531	NA	0.138	NA	9.7809424
674	3	41756965	41756965	C	T	exonic	ULK4	NA	nonsynonymous SNV	ULK4:NM_017886:exon24:c.G2551A:p.V851I	exonic	ENSG00000168038	NA	nonsynonymous SNV	ENSG00000168038:ENST00000301831:exon24:c.G2551A:p.V851I	NA	NA	3p22.1	Score=730;Name=V$SEF1_C	NA	Name=8	NA	rs61744388	0.25	0.25	0.268	0.265575	0.1839	0.1478	0.1628	0.5348	0.18	0.19	0.15	0.16	0.53	0.1975	0.53	0.35	T	0.002	B	0.005	B	0.060	N	1.000	P	0.695	N	-0.01	T	-0.973	T	0.000	T	0.041	0.768	8.06	-10.1	-2.451	-0.947	25.247	0.767962	NA	0.44	0.171332	0.469493	NA	0.283	NA	9.7806014
674	16	84513562	84513562	G	A	exonic	TLDC1	NA	nonsynonymous SNV	TLDC1:NM_020947:exon8:c.C1328T:p.S443L	exonic	ENSG00000140950	NA	nonsynonymous SNV	ENSG00000140950:ENST00000343629:exon8:c.C1328T:p.S443L,ENSG00000140950:ENST00000535580:exon9:c.C1247T:p.S416L	NA	NA	16q24.1	NA	NA	NA	NA	rs34628943	0.01	0.01	0.007	0.00798722	0.0169	NA	0.0259	0.0015	0.0031	0.01	NA	0.03	0.002	0.015	0.03	0.03	D	0.667	P	0.088	B	0.333	N	1.000	N	2.015	M	3.06	T	-1.070	T	0.010	T	0.101	0.62	7.339	1.65	0.276	0.545	10.800	0.620495	NA	0	0.023721	0.005682	NA	0.007	NA	9.7777124
674	1	152331240	152331240	G	A	exonic	FLG2	NA	nonsynonymous SNV	FLG2:NM_001014342:exon2:c.C121T:p.L41F	exonic	ENSG00000143520	NA	nonsynonymous SNV	ENSG00000143520:ENST00000388718:exon2:c.C121T:p.L41F	Score=473;Name=lod=112	NA	1q21.3	NA	NA	NA	NA	rs3818831	0.34	0.34	0.321	0.371805	0.1461	0.501	0.4222	0.4493	0.3303	0.15	0.49	0.36	0.42	0.2485	0.49	1	T	0.0	B	0.0	B	.	.	1.000	P	-0.335	N	2.36	T	-0.934	T	0.005	T	0.079	-0.391	2.168	5.26	0.946	1.519	8.297	-0.390521	NA	1	0.161163	0.403314	NA	0.341	NA	9.7775704
674	1	31347399	31347399	C	T	exonic	SDC3	NA	nonsynonymous SNV	SDC3:NM_014654:exon4:c.G907A:p.D303N	exonic	ENSG00000162512	NA	nonsynonymous SNV	ENSG00000162512:ENST00000336798:exon2:c.G733A:p.D245N,ENSG00000162512:ENST00000339394:exon4:c.G907A:p.D303N	NA	NA	1p35.2	NA	NA	NA	NA	rs4949184	0.18	0.18	0.173	0.234425	0.1799	0.0665	0.1628	0.3782	0.32	0.16	0.04	0.15	0.37	0.194	0.37	0.2	T	0.008	B	0.015	B	0.009	N	0.998	P	0.205	N	1.81	T	-0.950	T	0.000	T	0.003	3.891	19.78	4.7	2.454	3.045	6.755	3.890788	3.890788	0.04	0.181977	0.310259	NA	0.239	NA	9.7774564
674	9	136199466	136199466	G	A	exonic	SURF6	NA	nonsynonymous SNV	SURF6:NM_006753:exon4:c.C524T:p.T175M	exonic	ENSG00000148296	NA	nonsynonymous SNV	ENSG00000148296:ENST00000372022:exon4:c.C524T:p.T175M	NA	NA	9q34.2	NA	NA	NA	NA	rs886089	0.27	0.27	0.229	0.28095	0.3569	0.2986	0.3501	0.0386	0.4632	0.37	0.27	0.34	0.06	0.3496	0.37	0.1	T	0.532	P	0.125	B	0.145	N	1.000	P	0	N	2.5	T	-1.012	T	0.000	T	0.048	0.875	8.549	-8.28	-3.813	-1.892	1.671	0.875047	NA	0.08	0.350814	0.08443	ID=COSM1569382;OCCURENCE=1(large_intestine)	0.21	NA	9.7760194
674	3	193080414	193080414	C	G	exonic	ATP13A5	NA	nonsynonymous SNV	ATP13A5:NM_198505:exon4:c.G397C:p.E133Q	exonic	ENSG00000187527	NA	nonsynonymous SNV	ENSG00000187527:ENST00000342358:exon4:c.G397C:p.E133Q,ENSG00000187527:ENST00000446087:exon5:c.G463C:p.E155Q	Score=470;Name=lod=108	NA	3q29	NA	NA	NA	NA	rs6797429	0.53	0.53	0.544	0.513778	0.5288	0.3859	0.5259	0.646	0.4427	0.54	0.41	0.56	0.64	0.5117	0.64	0.72	T	0.0	B	0.001	B	0.006	N	1.000	P	-1.1	N	1.75	T	-0.995	T	0.000	T	0.052	-0.913	0.411	5.6	1.534	2.617	13.352	-0.913282	NA	0.96	0.517558	0.616432	NA	0.565	NA	9.7752754
675	8	48885436	48885436	T	A	exonic	MCM4	NA	nonsynonymous SNV	MCM4:NM_005914:exon13:c.T1948A:p.L650M,MCM4:NM_182746:exon14:c.T1948A:p.L650M	exonic	ENSG00000104738	NA	nonsynonymous SNV	ENSG00000104738:ENST00000262105:exon13:c.T1948A:p.L650M,ENSG00000104738:ENST00000523944:exon14:c.T1948A:p.L650M	Score=596;Name=lod=352	NA	8q11.21	NA	Name=Pol2-4H8	NA	NA	rs762679	0.92	0.92	0.936	0.914137	0.8449	1	0.9222	0.941	0.8548	0.83	1	0.9	0.96	0.8669	1	0.83	T	0.002	B	0.011	B	0.000	N	0.000	P	0.18	N	2.56	T	-0.942	T	0.000	T	0.275	1.118	9.559	5.32	0.967	7.133	10.738	1.117856	NA	0.79	0.847093	0.923513	NA	0.978	NA	9.7744404
675	5	151775064	151775064	C	G	exonic	NMUR2	NA	nonsynonymous SNV	NMUR2:NM_020167:exon3:c.G893C:p.S298T	exonic	ENSG00000132911	NA	nonsynonymous SNV	ENSG00000132911:ENST00000255262:exon3:c.G893C:p.S298T	Score=369;Name=lod=42	NA	5q33.1	NA	NA	NA	NA	rs4958535	0.13	0.13	0.111	0.122804	0.2038	0.0258	0.2954	0.0121	0.1667	0.21	0.04	0.27	0.01	0.1744	0.27	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-1.135	N	-0.48	T	-1.042	T	0.000	T	0.015	0.044	4.243	2.97	0.060	3.998	5.795	0.044036	NA	1	0.18093	0.053109	NA	0.13	NA	9.7742034
675	5	151771838	151771838	T	C	exonic	NMUR2	NA	nonsynonymous SNV	NMUR2:NM_020167:exon4:c.A1162G:p.M388V	exonic	ENSG00000132911	NA	nonsynonymous SNV	ENSG00000132911:ENST00000255262:exon4:c.A1162G:p.M388V	NA	NA	5q33.1	Score=942;Name=V$TCF11_01	NA	NA	NA	rs4958531	0.13	0.13	0.103	0.122804	0.2038	0.0258	0.2954	0.0121	0.1667	0.21	0.04	0.27	0.01	0.1745	0.27	1	T	0.0	B	0.0	B	0.001	N	1.000	P	-1.15	N	-0.28	T	-1.092	T	0.000	T	0.009	-1.684	0.012	-7.17	-1.680	-0.557	2.861	-1.683941	NA	1	0.18093	0.053336	NA	0.152	NA	9.7741034
675	19	37879589	37879589	A	G	exonic	ZNF527	NA	nonsynonymous SNV	ZNF527:NM_032453:exon5:c.A638G:p.H213R	exonic	ENSG00000189164	NA	nonsynonymous SNV	ENSG00000189164:ENST00000436120:exon5:c.A638G:p.H213R	NA	NA	19q13.12	NA	NA	NA	NA	rs4452075	0.31	0.31	0.282	0.345647	0.1581	0.3006	0.2666	0.5303	0.3916	0.15	0.33	0.3	0.52	0.2338	0.52	0.01	D	0.009	B	0.016	B	0.678	N	1.000	P	1.905	M	.	.	-0.941	T	0.000	T	0.103	1.511	11	-0.451	-0.407	1.296	6.376	1.510539	1.510539	0.18	0.168841	0.472437	NA	0.297	NA	9.7725924
675	5	151772055	151772055	G	T	exonic	NMUR2	NA	nonsynonymous SNV	NMUR2:NM_020167:exon4:c.C945A:p.F315L	exonic	ENSG00000132911	NA	nonsynonymous SNV	ENSG00000132911:ENST00000255262:exon4:c.C945A:p.F315L	Score=540;Name=lod=209	NA	5q33.1	NA	NA	NA	NA	rs1895245	0.13	0.13	0.103	0.122804	0.2038	0.0258	0.2954	0.0121	0.1667	0.21	0.04	0.27	0.01	0.1764	0.27	1	T	0.01	B	0.01	B	0.003	N	0.151	P	-0.025	N	1.61	T	-0.952	T	0.000	T	0.096	0.329	5.783	2.2	-0.007	2.077	9.623	0.328848	NA	0.39	0.18093	0.053336	NA	0.152	NA	9.7722034
675	12	80750659	80750659	G	A	exonic	OTOGL	NA	nonsynonymous SNV	OTOGL:NM_173591:exon48:c.G5957A:p.R1986Q	exonic	ENSG00000165899	NA	nonsynonymous SNV	ENSG00000165899:ENST00000550182:exon1:c.G8A:p.R3Q,ENSG00000165899:ENST00000546620:exon2:c.G14A:p.R5Q,ENSG00000165899:ENST00000458043:exon48:c.G5957A:p.R1986Q,ENSG00000165899:ENST00000547103:exon48:c.G5921A:p.R1974Q	Score=555;Name=lod=240	NA	12q21.31	NA	NA	NA	NA	rs11836060	0.15	0.15	0.139	0.171526	0.1819	0.0506	0.2075	0.1838	0.2434	0.18	0.05	0.21	0.17	0.1829	0.21	0.53	T	0.001	B	0.001	B	0.010	N	0.908	P	0.305	N	1.61	T	-0.970	T	0.000	T	0.138	2.393	13.96	4.06	0.253	3.251	7.626	2.393127	2.393127	0.29	0.196512	0.186791	NA	0.072	NA	9.7720214
675	4	951947	951947	T	C	exonic	TMEM175	NA	nonsynonymous SNV	TMEM175:NM_032326:exon11:c.T1178C:p.M393T	exonic	ENSG00000127419	NA	nonsynonymous SNV	ENSG00000127419:ENST00000508204:exon9:c.T932C:p.M311T,ENSG00000127419:ENST00000515740:exon9:c.T830C:p.M277T,ENSG00000127419:ENST00000264771:exon11:c.T1178C:p.M393T	Score=313;Name=lod=25	NA	4p16.3	NA	NA	NA	NA	rs34311866	0.12	0.12	0.124	0.139976	0.1869	0.131	0.0879	0.0083	0.316	0.2	0.12	0.07	0.01	0.1855	0.2	0.01	D	0.0	B	0.001	B	0.018	N	1.000	P	0	N	1.56	T	-1.044	T	0.000	T	0.408	0.003	4.032	0.788	-0.078	1.299	7.523	0.003419	NA	0	0.189595	0.035471	NA	0.072	NA	9.7713384
675	20	47269233	47269233	C	G	exonic	PREX1	NA	nonsynonymous SNV	PREX1:NM_020820:exon21:c.G2358C:p.Q786H	exonic	ENSG00000124126	NA	nonsynonymous SNV	ENSG00000124126:ENST00000371941:exon21:c.G2358C:p.Q786H,ENSG00000124126:ENST00000396220:exon21:c.G2358C:p.Q786H	Score=515;Name=lod=165	NA	20q13.13	NA	NA	NA	NA	rs41283558	0.14	0.14	0.121	0.149561	0.1849	0.1468	0.2118	0.0197	0.2474	0.18	0.14	0.22	0.03	0.19	0.22	0.2	T	0.018	B	0.035	B	0.002	N	0.000	P	1.59	L	0.99	T	-1.069	T	0.000	T	0.225	2.228	13.41	3.56	0.893	3.347	13.953	2.228164	2.228164	0	0.188721	0.056741	ID=COSM1412287,COSM1412286;OCCURENCE=1(large_intestine)	0.123	NA	9.7697124
675	22	20307256	20307256	G	A	exonic	DGCR6L	NA	synonymous SNV	DGCR6L:NM_033257:exon2:c.C177T:p.T59T	exonic	ENSG00000128185	NA	nonsynonymous SNV	ENSG00000128185:ENST00000405465:exon2:c.C164T:p.P55L	Score=651;Name=lod=588	NA	22q11.21	NA	Name=HA-E2F1,Pol2	NA	NA	rs7235	0.27	0.27	0.241	0.239217	0.4314	0.1766	0.2205	0.1271	0.271	0.44	0.19	0.23	0.11	0.3602	0.44	1	T	.	.	.	.	.	.	0.000	P	.	.	1.29	T	-0.956	T	0.000	T	.	-0.658	1.11	-2.34	-0.496	-1.230	6.272	-0.658346	NA	1	0.438939	0.162733	ID=COSM149253;OCCURENCE=1(stomach)	0.181	NA	9.769461
675	7	105177041	105177041	A	T	exonic	RINT1	NA	nonsynonymous SNV	RINT1:NM_021930:exon3:c.A118T:p.S40C	exonic	ENSG00000135249	NA	nonsynonymous SNV	ENSG00000135249:ENST00000257700:exon3:c.A118T:p.S40C,ENSG00000135249:ENST00000467392:exon3:c.A118T:p.S40C,ENSG00000135249:ENST00000497979:exon3:c.A118T:p.S40C	NA	NA	7q22.3	NA	NA	NA	NA	rs11556986	0.16	0.16	0.157	0.191494	0.1948	0.0218	0.17	0.2738	0.2669	0.21	0.01	0.17	0.25	0.1891	0.25	0.05	D	0.0	B	0.002	B	0.081	N	1.000	P	1.245	L	1.8	T	-1.020	T	0.000	T	0.063	1.065	9.35	2.75	0.279	1.413	6.722	1.065381	NA	0.01	0.18	0.253518	NA	0.159	NA	9.7694334
675	3	42772038	42772038	A	T	exonic	CCDC13	NA	nonsynonymous SNV	CCDC13:NM_144719:exon13:c.T1639A:p.S547T	exonic	ENSG00000244607	NA	nonsynonymous SNV	ENSG00000244607:ENST00000310232:exon13:c.T1639A:p.S547T	NA	NA	3p22.1	NA	Name=RXRA,HNF4G_(SC-6558),TCF4	Name=2	NA	rs12495805	0.2	0.2	0.21	0.204073	0.1849	0.1081	0.1844	0.2451	0.2812	0.19	0.12	0.21	0.28	0.1968	0.28	0.61	T	0.0	B	0.0	B	0.039	N	1.000	P	-1.935	N	2.86	T	-0.946	T	0.000	T	0.017	-0.83	0.599	-3.26	-0.933	-0.454	10.147	-0.829686	NA	1	0.182209	0.244439	NA	0.225	NA	9.7694244
676	10	100190920	100190920	G	A	exonic	HPS1	NA	synonymous SNV	HPS1:NM_000195:exon7:c.C636T:p.L212L,HPS1:NM_182639:exon7:c.C636T:p.L212L	exonic	ENSG00000107521	NA	synonymous SNV	ENSG00000107521:ENST00000359632:exon1:c.C120T:p.L40L,ENSG00000107521:ENST00000325103:exon7:c.C636T:p.L212L,ENSG00000107521:ENST00000338546:exon7:c.C636T:p.L212L,ENSG00000107521:ENST00000361490:exon7:c.C636T:p.L212L	NA	NA	10q24.2	Score=873;Name=V$ELK1_02	NA	Name=8	NA	rs1801287	0.28	0.28	0.262	0.282947	0.2952	0.3442	0.2911	0.1369	0.3988	0.3	0.35	0.29	0.14	0.3157	0.35	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.056	T	0.000	T	.	0.573	7.097	-10.6	-2.442	-1.746	8.234	0.573403	NA	NA	0.292442	0.134362	ID=COSM426895;OCCURENCE=1(breast)	0.239	NA	9.7633246
676	1	228504591	228504591	C	A	exonic	OBSCN	NA	nonsynonymous SNV	OBSCN:NM_001098623:exon51:c.C13467A:p.H4489Q,OBSCN:NM_052843:exon51:c.C13467A:p.H4489Q,OBSCN:NM_001271223:exon62:c.C16338A:p.H5446Q	exonic	ENSG00000154358	NA	nonsynonymous SNV	ENSG00000154358:ENST00000284548:exon51:c.C13467A:p.H4489Q,ENSG00000154358:ENST00000366709:exon51:c.C4824A:p.H1608Q,ENSG00000154358:ENST00000422127:exon51:c.C13467A:p.H4489Q,ENSG00000154358:ENST00000366707:exon57:c.C6369A:p.H2123Q,ENSG00000154358:ENST00000570156:exon62:c.C16338A:p.H5446Q	NA	NA	1q42.13	NA	NA	NA	NA	rs61825301	0.16	0.16	0.133	0.145367	0.159	0.1518	0.2349	0.121	0.0941	0.16	0.15	0.24	0.1	0.2444	0.24	0.29	T	0.999	D	0.921	D	0.000	D	1.000	P	1.855	L	0.6	T	-1.041	T	0.000	T	0.357	1.937	12.44	0.187	-0.223	-0.722	9.788	1.93745	1.93745	0.25	0.167182	0.157343	NA	0.145	NA	9.7627514
676	1	206626607	206626607	G	A	exonic	SRGAP2	NA	unknown	UNKNOWN	exonic	ENSG00000163486	NA	synonymous SNV	ENSG00000163486:ENST00000439126:exon11:c.G1083A:p.L361L,ENSG00000163486:ENST00000414007:exon16:c.G1821A:p.L607L,ENSG00000163486:ENST00000419187:exon16:c.G156A:p.L52L	Score=604;Name=lod=381	NA	1q32.1	Score=782;Name=V$E2F_01	NA	NA	NA	rs11120575	0.37	0.37	0.393	0.346046	0.5338	0.2708	0.3948	0.1989	0.3947	0.55	0.24	0.42	0.21	0.523	0.55	.	.	.	.	.	.	.	.	0.711	P	.	.	.	.	-0.896	T	0.000	T	.	1.584	11.25	5.62	2.633	1.812	18.649	1.58447	1.58447	NA	0.514563	0.251212	NA	0.413	NA	9.7619703
676	15	91083353	91083353	G	A	exonic	CRTC3	NA	nonsynonymous SNV	CRTC3:NM_001042574:exon2:c.G215A:p.S72N,CRTC3:NM_022769:exon2:c.G215A:p.S72N	exonic	ENSG00000140577	NA	nonsynonymous SNV	ENSG00000140577:ENST00000268184:exon2:c.G215A:p.S72N,ENSG00000140577:ENST00000420329:exon2:c.G215A:p.S72N,ENSG00000140577:ENST00000560098:exon2:c.G215A:p.S72N	NA	NA	15q26.1	Score=780;Name=V$HEN1_02	NA	NA	NA	rs8033595	0.39	0.39	0.386	0.373602	0.5626	0.1786	0.3674	0.3729	0.3855	0.55	0.18	0.45	0.35	0.4612	0.55	0.26	T	0.955	P	0.85	P	0.003	N	0.804	P	-0.08	N	2.73	T	-1.014	T	0.000	T	0.029	2.131	13.08	2.37	0.370	1.228	8.605	2.131448	2.131448	0.29	0.547697	0.401501	NA	0.355	NA	9.7618364
676	16	30536918	30536918	C	G	exonic	ZNF768	NA	nonsynonymous SNV	ZNF768:NM_024671:exon2:c.G543C:p.E181D	exonic	ENSG00000169957	NA	nonsynonymous SNV	ENSG00000169957:ENST00000380412:exon2:c.G543C:p.E181D,ENSG00000169957:ENST00000562803:exon2:c.G450C:p.E150D	Score=289;Name=lod=20	NA	16p11.2	NA	NA	NA	NA	rs10871453	0.29	0.29	0.296	0.267971	0.3827	0.005	0.2695	0.4856	0.1258	0.37	0.0017	0.31	0.49	0.2995	0.49	0.34	T	0.963	D	0.543	P	0.000	D	0.862	P	0	N	3.21	T	-0.975	T	0.000	T	0.338	2.843	15.47	0.635	-0.007	0.396	3.762	2.842609	2.842609	NA	0.389302	0.460628	NA	0.326	NA	9.7618314
676	7	156469179	156469179	C	T	exonic	RNF32	NA	nonsynonymous SNV	RNF32:NM_001184996:exon9:c.C919T:p.R307C,RNF32:NM_001184997:exon9:c.C919T:p.R307C,RNF32:NM_030936:exon9:c.C919T:p.R307C	exonic	ENSG00000105982	NA	nonsynonymous SNV	ENSG00000105982:ENST00000343665:exon7:c.C847T:p.R283C,ENSG00000105982:ENST00000317955:exon9:c.C919T:p.R307C,ENSG00000105982:ENST00000392743:exon9:c.C919T:p.R307C,ENSG00000105982:ENST00000432459:exon9:c.C919T:p.R307C,ENSG00000105982:ENST00000405335:exon10:c.C919T:p.R307C	NA	NA	7q36.3	NA	Name=Pol2	NA	NA	rs2302146	0.42	0.42	0.427	0.402556	0.3559	0.4058	0.415	0.531	0.2648	0.38	0.41	0.38	0.53	0.371	0.53	0.04	D	0.986	D	0.594	P	0.097	N	1.000	P	0.895	L	-0.26	T	-1.001	T	0.000	T	0.054	2.323	13.73	-0.589	-0.157	0.486	2.196	2.323027	2.323027	0.05	0.345	0.488652	NA	0.014	NA	9.7614334
676	10	102684380	102684380	C	A	exonic	FAM178A	NA	nonsynonymous SNV	FAM178A:NM_001136123:exon5:c.C1622A:p.S541Y,FAM178A:NM_018121:exon5:c.C1622A:p.S541Y	exonic	ENSG00000119906	NA	nonsynonymous SNV	ENSG00000119906:ENST00000238961:exon5:c.C1622A:p.S541Y,ENSG00000119906:ENST00000370269:exon5:c.C1622A:p.S541Y,ENSG00000119906:ENST00000370271:exon5:c.C1622A:p.S541Y	Score=352;Name=lod=36	NA	10q24.31	NA	NA	NA	NA	rs10883563	0.33	0.33	0.287	0.31869	0.5746	0.0952	0.4769	0.1619	0.3855	0.58	0.1	0.46	0.12	0.4574	0.58	0.51	T	1.0	D	0.971	D	0.001	N	0.569	P	0.805	L	0.77	T	-0.943	T	0.000	T	0.37	2.469	14.21	4.17	0.874	0.681	13.491	2.468846	2.468846	0.04	0.541047	0.207898	NA	0.348	NA	9.7602864
676	14	64497930	64497930	G	A	exonic	SYNE2	NA	nonsynonymous SNV	SYNE2:NM_015180:exon45:c.G7076A:p.S2359N,SYNE2:NM_182914:exon45:c.G7076A:p.S2359N	exonic	ENSG00000054654	NA	nonsynonymous SNV	ENSG00000054654:ENST00000554584:exon44:c.G7076A:p.S2359N,ENSG00000054654:ENST00000344113:exon45:c.G7076A:p.S2359N,ENSG00000054654:ENST00000358025:exon45:c.G7076A:p.S2359N	Score=278;Name=lod=18	NA	14q23.2	NA	NA	NA	NA	rs4027404	0.69	0.69	0.707	0.702476	0.8757	0.7798	0.8069	0.4236	0.7474	0.8	0.76	0.76	0.4	0.8209	0.88	0.52	T	0.004	B	0.012	B	0.051	N	0.000	P	0.895	L	0.72	T	-0.995	T	0.000	T	0.02	-0.18	3.123	3.1	1.208	0.982	5.694	-0.180117	NA	0.44	0.878191	0.527614	NA	0.703	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118548.1;CLNDSDB=.;CLNDSDBID=.	9.7585424
676	12	8329676	8329676	C	T	exonic	ZNF705A	NA	nonsynonymous SNV	ZNF705A:NM_001004328:exon5:c.C400T:p.R134C	exonic	ENSG00000196946	NA	nonsynonymous SNV	ENSG00000196946:ENST00000359286:exon5:c.C400T:p.R134C,ENSG00000196946:ENST00000396570:exon6:c.C400T:p.R134C	NA	NA	12p13.31	NA	NA	NA	NA	rs10743252	0.46	0.46	0.419	0.501398	0.5845	0.5288	0.4914	0.4992	0.3978	0.5	0.48	0.45	0.36	0.5053	0.5	0.05	D	0.0	B	0.0	B	.	.	1.000	P	0.205	N	3.07	T	-0.928	T	0.000	T	0.044	-0.677	1.048	-2.7	-2.873	-1.071	3.854	-0.676742	NA	0.19	0.486505	0.421471	ID=COSM147415;OCCURENCE=1(stomach)	NA	NA	9.7570284
676	20	56137895	56137895	G	C	exonic	PCK1	NA	nonsynonymous SNV	PCK1:NM_002591:exon4:c.G550C:p.V184L	exonic	ENSG00000124253	NA	nonsynonymous SNV	ENSG00000124253:ENST00000535860:exon2:c.G154C:p.V52L,ENSG00000124253:ENST00000319441:exon4:c.G550C:p.V184L	Score=383;Name=lod=48	NA	20q13.31	Score=708;Name=V$HOX13_01	NA	NA	NA	rs707555	0.87	0.87	0.876	0.846046	0.8648	0.7798	0.8055	0.9962	0.7209	0.86	0.79	0.84	0.99	0.8463	0.99	1	T	0.0	B	0.0	B	0.000	N	0.000	P	-3.99	N	3.96	T	-0.924	T	0.000	T	0.235	-0.175	3.147	5.13	1.304	4.387	16.134	-0.174947	NA	1	0.865698	0.970495	NA	0.891	NA	9.7565354
676	18	56205262	56205262	A	C	exonic	ALPK2	NA	nonsynonymous SNV	ALPK2:NM_052947:exon5:c.T2157G:p.H719Q	exonic	ENSG00000198796	NA	nonsynonymous SNV	ENSG00000198796:ENST00000361673:exon5:c.T2157G:p.H719Q	NA	NA	18q21.32	NA	Name=Pol2-4H8,EBF,Pol2	NA	NA	rs12103986	0.44	0.44	0.426	0.404353	0.5736	0.2361	0.4294	0.4312	0.3497	0.59	0.24	0.51	0.38	0.47	0.59	1	T	0.0	B	0.001	B	0.940	N	1.000	P	-0.55	N	1.07	T	-0.960	T	0.000	T	0.03	-0.931	0.376	-5.12	-1.351	-1.093	10.123	-0.931153	NA	0	0.53407	0.450976	NA	0.522	NA	9.7556634
677	1	111957592	111957592	A	G	exonic	OVGP1	NA	nonsynonymous SNV	OVGP1:NM_002557:exon11:c.T1531C:p.S511P	exonic	ENSG00000085465	NA	nonsynonymous SNV	ENSG00000085465:ENST00000369732:exon11:c.T1531C:p.S511P	NA	NA	1p13.2	NA	Name=RXRA,FOSL2	NA	NA	rs56294468	0.2	0.2	0.15	0.223243	0.2763	0.1587	0.1715	0.1989	0.3047	0.27	0.13	0.19	0.18	0.0041	0.3	0.34	T	0.0	B	0.0	B	.	.	1.000	P	-0.805	N	3.95	T	-0.920	T	0.001	T	0.045	-0.131	3.357	-5.52	-1.460	-0.421	4.337	-0.131299	NA	0.28	0.299884	0.176551	NA	0.072	NA	9.7530494
677	17	47039132	47039132	T	C	exonic	GIP	NA	nonsynonymous SNV	GIP:NM_004123:exon4:c.A307G:p.S103G	exonic	ENSG00000159224	NA	nonsynonymous SNV	ENSG00000159224:ENST00000357424:exon4:c.A307G:p.S103G	NA	NA	17q21.32	NA	Name=eGFP-FOS,FOSL2,Egr-1,c-Fos,Pol2-4H8,GATA-2,Rad21,ELF1_(SC-631),GR,FOSL1_(SC-183),p300,RXRA,CHD2_(N-1250),TCF4,Pol2,NRSF	Name=105	NA	rs2291725	0.46	0.46	0.45	0.422524	0.5497	0.6835	0.451	0.0651	0.4857	0.56	0.7	0.43	0.07	0.4953	0.7	0.65	T	0.0	B	0.0	B	0.476	N	1.000	P	-0.205	N	1.88	T	-0.974	T	0.000	T	0.008	-0.287	2.629	-5.07	-1.203	0.042	4.524	-0.28691	NA	0.72	0.535349	0.142533	ID=COSM148293;OCCURENCE=1(stomach)	0.362	NA	9.7529844
677	2	74710491	74710491	C	T	exonic	TTC31	NA	nonsynonymous SNV	TTC31:NM_022492:exon2:c.C83T:p.A28V	exonic	ENSG00000115282	NA	nonsynonymous SNV	ENSG00000115282:ENST00000233623:exon2:c.C83T:p.A28V,ENSG00000115282:ENST00000410003:exon2:c.C83T:p.A28V,ENSG00000115282:ENST00000424122:exon2:c.C83T:p.A28V,ENSG00000115282:ENST00000449459:exon2:c.C83T:p.A28V	Score=385;Name=lod=49	NA	2p13.1	NA	Name=Rad21,NFKB,SRF,CTCF_(C-20),SIX5,PAX5-C20,TCF12,CTCF,CTCFL_(SC-98982),Znf143_(16618-1-AP),GATA-1,SMC3_(ab9263),Pol2,CTCF_(SC-5916),ZNF263,HA-E2F1	Name=148	NA	rs6707475	0.51	0.51	0.527	0.547324	0.159	0.8224	0.3256	0.907	0.3344	0.15	0.82	0.27	0.89	0.2797	0.89	1	T	0.0	B	0.0	B	0.049	N	0.000	P	-1.61	N	1.16	T	-1.001	T	0.000	T	0.058	2.535	14.44	0.28	-0.006	-0.054	3.169	2.534928	2.534928	0.66	0.144573	0.760051	NA	0.464	NA	9.7500604
677	6	31378358	31378358	T	G	exonic	MICA	NA	nonsynonymous SNV	MICA:NM_000247:exon2:c.T109G:p.W37G,MICA:NM_001177519:exon2:c.T109G:p.W37G	exonic	ENSG00000204520	NA	nonsynonymous SNV	ENSG00000204520:ENST00000421350:exon2:c.T70G:p.W24G,ENSG00000204520:ENST00000449934:exon2:c.T109G:p.W37G	NA	NA	6p21.33	NA	NA	NA	NA	rs1063630	0.26	0.26	0.214	0.268171	0.1928	0.1786	0.3386	0.3797	0.2372	0.21	0.17	0.39	0.36	0.2227	0.39	0.05	D	0.355	B	0.234	B	0.126	N	1.000	P	0.455	N	5.86	T	-0.949	T	0.001	T	0.276	0.451	6.451	-2.15	-0.789	-0.968	4.674	0.451312	NA	0.01	0.168242	0.343931	NA	0.217	NA	9.7495914
677	12	109937534	109937534	G	A	exonic	UBE3B	NA	nonsynonymous SNV	UBE3B:NM_130466:exon12:c.G1037A:p.R346Q,UBE3B:NM_183415:exon12:c.G1037A:p.R346Q	exonic	ENSG00000151148	NA	nonsynonymous SNV	ENSG00000151148:ENST00000539599:exon11:c.G1037A:p.R346Q,ENSG00000151148:ENST00000280774:exon12:c.G1037A:p.R346Q,ENSG00000151148:ENST00000342494:exon12:c.G1037A:p.R346Q,ENSG00000151148:ENST00000434735:exon12:c.G1037A:p.R346Q,ENSG00000151148:ENST00000449510:exon12:c.G1037A:p.R346Q	Score=539;Name=lod=206	NA	12q24.11	NA	NA	NA	NA	rs7298565	0.52	0.52	0.535	0.517173	0.5417	0.3105	0.4899	0.7731	0.3783	0.55	0.29	0.51	0.74	0.5102	0.74	0.83	T	0.0	B	0.0	B	0.000	N	0.000	P	-2.215	N	1.7	T	-0.959	T	0.000	T	0.215	1.177	9.788	5.64	0.974	7.276	11.013	1.177035	NA	0.81	0.532326	0.731276	NA	0.529	NA	9.7491074
677	7	23757162	23757162	G	C	exonic	STK31	NA	nonsynonymous SNV	STK31:NM_001260504:exon4:c.G144C:p.Q48H,STK31:NM_001260505:exon4:c.G213C:p.Q71H,STK31:NM_031414:exon4:c.G213C:p.Q71H,STK31:NM_032944:exon4:c.G144C:p.Q48H	exonic;splicing	ENSG00000196335;ENSG00000196335	ENST00000422637:exon4:c.82-1G>C	nonsynonymous SNV	ENSG00000196335:ENST00000354639:exon4:c.G144C:p.Q48H,ENSG00000196335:ENST00000355870:exon4:c.G213C:p.Q71H,ENSG00000196335:ENST00000428484:exon4:c.G144C:p.Q48H,ENSG00000196335:ENST00000433467:exon4:c.G213C:p.Q71H,ENSG00000196335:ENST00000444333:exon4:c.G144C:p.Q48H,ENSG00000196335:ENST00000456014:exon4:c.G144C:p.Q48H	Score=462;Name=lod=101	NA	7p15.3	NA	NA	NA	NA	rs6945306	0.25	0.25	0.227	NA	NA	NA	NA	NA	NA	0.29	0.35	0.18	0.13	0.2945	0.35	0.31	T	0.001	B	0.005	B	0.968	N	1.000	P	0.345	N	2.94	T	-0.903	T	0.000	T	0.273	0.225	5.213	2.95	0.838	1.356	6.068	0.224817	NA	0.2	0.289767	0.16591	NA	0.181	NA	9.7490664
677	2	239155053	239155053	C	T	exonic	PER2	NA	nonsynonymous SNV	PER2:NM_022817:exon23:c.G3731A:p.G1244E	exonic	ENSG00000132326	NA	nonsynonymous SNV	ENSG00000132326:ENST00000254657:exon23:c.G3731A:p.G1244E	NA	NA	2q37.3	NA	NA	NA	NA	rs934945	0.19	0.19	0.166	0.17472	0.1789	0.2639	0.317	0.0083	0.2025	0.19	0.27	0.3	0.01	0.2176	0.3	1	T	0.02	B	0.008	B	0.886	N	1.000	P	1.04	L	2.9	T	-0.929	T	0.000	T	0.039	1.19	9.836	2.88	1.224	1.428	5.508	1.189691	NA	1	0.189884	0.044258	NA	0.225	NA	9.7469494
678	9	140051376	140051376	G	A	exonic	GRIN1	NA	synonymous SNV	GRIN1:NM_000832:exon6:c.G855A:p.V285V,GRIN1:NM_007327:exon6:c.G855A:p.V285V,GRIN1:NM_021569:exon6:c.G855A:p.V285V,GRIN1:NM_001185090:exon7:c.G918A:p.V306V,GRIN1:NM_001185091:exon7:c.G918A:p.V306V	exonic	ENSG00000176884	NA	synonymous SNV	ENSG00000176884:ENST00000315048:exon6:c.G855A:p.V285V,ENSG00000176884:ENST00000350902:exon6:c.G855A:p.V285V,ENSG00000176884:ENST00000371550:exon6:c.G855A:p.V285V,ENSG00000176884:ENST00000371559:exon6:c.G855A:p.V285V,ENSG00000176884:ENST00000371561:exon6:c.G855A:p.V285V,ENSG00000176884:ENST00000371546:exon7:c.G918A:p.V306V,ENSG00000176884:ENST00000371553:exon7:c.G918A:p.V306V,ENSG00000176884:ENST00000371555:exon7:c.G918A:p.V306V,ENSG00000176884:ENST00000371560:exon7:c.G918A:p.V306V	Score=526;Name=lod=183	NA	9q34.3	Score=845;Name=V$EGR3_01	Name=ZNF263,Egr-1,SUZ12,E2F6_(H-50),SP1,Pol2	Name=87	NA	rs1126442	0.16	0.16	0.136	0.139577	0.336	0.002	0.2017	0.0265	0.1881	0.34	0.0017	0.21	0.03	0.2679	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.036959	2.036959	NA	0.319241	0.065544	NA	0.065	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117172.2;CLNDSDB=.;CLNDSDBID=.	9.7435256
678	2	100210642	100210642	T	C	exonic	AFF3	NA	nonsynonymous SNV	AFF3:NM_001025108:exon14:c.A1556G:p.N519S,AFF3:NM_002285:exon14:c.A1481G:p.N494S	exonic	ENSG00000144218	NA	nonsynonymous SNV	ENSG00000144218:ENST00000409236:exon13:c.A1481G:p.N494S,ENSG00000144218:ENST00000317233:exon14:c.A1481G:p.N494S,ENSG00000144218:ENST00000356421:exon14:c.A1556G:p.N519S,ENSG00000144218:ENST00000409579:exon15:c.A1556G:p.N519S	NA	NA	2q11.2	NA	NA	Name=2	NA	rs1047265	0.14	0.14	0.137	0.147764	0.2038	0.0873	0.1239	0.0877	0.2505	0.21	0.1	0.14	0.08	0.1833	0.21	0.74	T	0.002	B	0.008	B	0.279	N	1.000	P	1.01	L	-0.01	T	-1.143	T	0.000	T	0.003	-0.828	0.604	-11.7	-2.514	-1.095	8.322	-0.827843	NA	0.74	0.202907	0.115751	NA	0.225	NA	9.7433264
678	3	171404478	171404478	C	A	exonic	PLD1	NA	nonsynonymous SNV	PLD1:NM_002662:exon16:c.G1864T:p.A622S	exonic	ENSG00000075651	NA	nonsynonymous SNV	ENSG00000075651:ENST00000340989:exon16:c.G1864T:p.A622S,ENSG00000075651:ENST00000351298:exon16:c.G1864T:p.A622S	NA	NA	3q26.31	NA	NA	NA	NA	rs2290480	0.15	0.15	0.134	0.165535	0.1988	0.13	0.1052	0.1384	0.2474	0.2	0.12	0.12	0.13	0.1869	0.27	0.82	T	0.0	B	0.0	B	0.000	N	1.000	P	-0.345	N	3.43	T	-0.964	T	0.000	T	0.063	0.417	6.267	-8.81	-2.053	-3.644	9.557	0.417295	NA	0.13	0.204884	0.128007	ID=COSM1162698;OCCURENCE=1(pancreas)	0.181	NA	9.7427494
678	5	78340286	78340286	A	G	exonic	DMGDH	NA	nonsynonymous SNV	DMGDH:NM_013391:exon6:c.T835C:p.S279P	exonic	ENSG00000132837	NA	nonsynonymous SNV	ENSG00000132837:ENST00000380311:exon3:c.T232C:p.S78P,ENSG00000132837:ENST00000523732:exon3:c.T352C:p.S118P,ENSG00000132837:ENST00000255189:exon6:c.T835C:p.S279P	Score=516;Name=lod=167	NA	5q14.1	NA	NA	NA	NA	rs532964	0.61	0.61	0.609	0.615216	0.506	0.7798	0.5879	0.6271	0.5613	0.5	0.78	0.61	0.58	0.5614	0.78	1	T	0.0	B	0.0	B	0.000	N	0.000	P	-2.265	N	1.78	T	-0.956	T	0.000	T	0.205	0.87	8.528	5.29	1.388	7.831	14.534	0.870415	NA	1	0.526279	0.600999	NA	0.551	NA	9.7396544
679	16	21151913	21151913	G	T	exonic	DNAH3	NA	nonsynonymous SNV	DNAH3:NM_017539:exon5:c.C640A:p.Q214K	exonic	ENSG00000158486	NA	nonsynonymous SNV	ENSG00000158486:ENST00000261383:exon5:c.C640A:p.Q214K,ENSG00000158486:ENST00000415178:exon5:c.C640A:p.Q214K	Score=383;Name=lod=48	NA	16p12.3	NA	NA	NA	NA	rs72780891	0.16	0.16	0.133	0.170927	0.1869	0.129	0.2954	0.0968	0.2096	0.2	0.11	0.25	0.09	0.2087	0.25	0.97	T	0.147	B	0.061	B	0.481	N	0.982	P	1.32	L	2.21	T	-0.978	T	0.000	T	0.172	0.872	8.534	4.1	1.318	0.697	3.879	0.871685	NA	0.66	0.203605	0.120627	ID=COSM1376588,COSM1376589;OCCURENCE=1(large_intestine)	0.159	NA	9.7341284
679	1	152283236	152283236	T	C	exonic	FLG	NA	nonsynonymous SNV	FLG:NM_002016:exon3:c.A4126G:p.R1376G	exonic	ENSG00000143631	NA	nonsynonymous SNV	ENSG00000143631:ENST00000368799:exon3:c.A4126G:p.R1376G	NA	NA	1q21.3	NA	NA	NA	NA	rs11581433	0.27	0.27	0.226	0.343051	0.171	0.6062	0.4236	0.1218	0.4908	0.15	0.55	0.3	0.1	0.2614	0.55	1	T	0.0	B	0.001	B	.	.	1.000	P	-1.3	N	4.49	T	-0.960	T	0.001	T	0.033	0.552	6.987	-4.46	-0.955	-2.374	8.082	0.552125	NA	0.85	0.167054	0.137767	NA	0.152	NA	9.7338794
679	17	56676368	56676368	T	C	exonic	TEX14	NA	nonsynonymous SNV	TEX14:NM_001201457:exon14:c.A2356G:p.N786D,TEX14:NM_031272:exon14:c.A2338G:p.N780D,TEX14:NM_198393:exon14:c.A2338G:p.N780D	exonic	ENSG00000121101	NA	nonsynonymous SNV	ENSG00000121101:ENST00000240361:exon14:c.A2356G:p.N786D,ENSG00000121101:ENST00000349033:exon14:c.A2338G:p.N780D,ENSG00000121101:ENST00000389934:exon14:c.A2338G:p.N780D	NA	NA	17q22	Score=845;Name=V$OCT1_Q6	NA	NA	NA	rs389389	0.11	0.11	0.105	0.0896565	0.2286	NA	0.1282	0.0356	0.0849	0.21	NA	0.16	0.04	0.1557	0.22	0.33	T	0.0	B	0.003	B	0.285	N	1.000	P	1.78	L	-1.13	T	-1.095	T	0.000	T	0.028	0.755	8	-3.63	-1.256	-0.600	7.020	0.755293	NA	0	0.215233	0.056741	NA	0.225	NA	9.7338004
679	1	152285930	152285930	G	A	exonic	FLG	NA	nonsynonymous SNV	FLG:NM_002016:exon3:c.C1432T:p.P478S	exonic	ENSG00000143631	NA	nonsynonymous SNV	ENSG00000143631:ENST00000368799:exon3:c.C1432T:p.P478S	NA	NA	1q21.3	NA	NA	NA	NA	rs11584340	0.31	0.31	0.271	0.344649	0.171	0.6062	0.4222	0.1286	0.4908	0.17	0.62	0.35	0.15	0.2613	0.62	1	T	0.02	B	0.034	B	.	.	1.000	P	-1.75	N	5.59	T	-0.999	T	0.000	T	0.013	0.046	4.251	-3.12	-1.350	-1.893	3.067	0.045625	NA	1	0.167907	0.139582	NA	0.217	NA	9.7331264
679	10	98380137	98380137	T	C	exonic	PIK3AP1	NA	nonsynonymous SNV	PIK3AP1:NM_152309:exon12:c.A1913G:p.K638R	exonic	ENSG00000155629	NA	nonsynonymous SNV	ENSG00000155629:ENST00000371109:exon5:c.A710G:p.K237R,ENSG00000155629:ENST00000371110:exon11:c.A1379G:p.K460R,ENSG00000155629:ENST00000339364:exon12:c.A1913G:p.K638R	Score=557;Name=lod=245	NA	10q24.1	NA	NA	NA	NA	rs12784975	0.19	0.19	0.161	0.157348	0.2296	0.0883	0.3516	0.1014	0.092	0.24	0.09	0.31	0.14	0.1786	0.31	0.35	T	0.011	B	0.011	B	0.000	N	0.006	P	1.43	L	0.88	T	-0.988	T	0.000	T	0.06	1.969	12.54	3.57	0.495	1.701	9.532	1.968994	1.968994	0.13	0.194884	0.123014	NA	0.21	NA	9.7302494
679	20	34219496	34219496	T	C	exonic	CPNE1	NA	nonsynonymous SNV	CPNE1:NM_001198863:exon8:c.A632G:p.Q211R,CPNE1:NM_003915:exon8:c.A647G:p.Q216R,CPNE1:NM_152925:exon8:c.A632G:p.Q211R,CPNE1:NM_152926:exon8:c.A632G:p.Q211R,CPNE1:NM_152927:exon9:c.A632G:p.Q211R,CPNE1:NM_152928:exon9:c.A632G:p.Q211R	exonic	ENSG00000214078	NA	nonsynonymous SNV	ENSG00000214078:ENST00000412056:exon7:c.A560G:p.Q187R,ENSG00000214078:ENST00000416778:exon7:c.A560G:p.Q187R,ENSG00000214078:ENST00000430570:exon7:c.A560G:p.Q187R,ENSG00000214078:ENST00000317677:exon8:c.A647G:p.Q216R,ENSG00000214078:ENST00000397442:exon8:c.A632G:p.Q211R,ENSG00000214078:ENST00000397443:exon8:c.A632G:p.Q211R,ENSG00000214078:ENST00000401607:exon8:c.A632G:p.Q211R,ENSG00000214078:ENST00000414664:exon8:c.A632G:p.Q211R,ENSG00000214078:ENST00000437340:exon8:c.A632G:p.Q211R,ENSG00000214078:ENST00000439806:exon8:c.A632G:p.Q211R,ENSG00000214078:ENST00000397445:exon9:c.A632G:p.Q211R,ENSG00000214078:ENST00000397446:exon9:c.A632G:p.Q211R,ENSG00000214078:ENST00000317619:exon10:c.A632G:p.Q211R,ENSG00000214078:ENST00000352393:exon10:c.A632G:p.Q211R	Score=425;Name=lod=71	NA	20q11.22	NA	NA	NA	NA	rs6579255	0.22	0.22	0.231	0.271965	0.1899	0.1359	0.1844	0.4244	0.3528	0.19	0.11	0.22	0.4	0.2229	0.4	0.53	T	0.0	B	0.002	B	0.657	N	1.000	P	0.4	N	-0.46	T	-0.969	T	0.000	T	0.397	1.613	11.35	4.46	0.812	1.628	6.516	1.612918	1.612918	0.5	0.190581	0.394462	NA	0.268	NA	9.7299524
679	19	7986638	7986638	C	G	exonic	SNAPC2	NA	nonsynonymous SNV	SNAPC2:NM_003083:exon3:c.C352G:p.L118V	exonic	ENSG00000104976	NA	nonsynonymous SNV	ENSG00000104976:ENST00000221573:exon3:c.C352G:p.L118V	NA	NA	19p13.2	NA	Name=USF-1,Pol2	NA	NA	rs475002	0.45	0.45	0.407	0.41274	0.5467	0.5169	0.4092	0.2156	0.4366	0.54	0.5	0.44	0.24	0.4983	0.56	0.06	T	0.992	D	0.912	D	0.011	N	1.000	P	2.19	M	0.79	T	-0.928	T	0.000	T	0.145	2.917	15.72	-0.458	0.200	-0.315	1.330	2.916868	2.916868	0.08	0.5592	0.281888	NA	0.457	NA	9.7291334
679	17	39671724	39671724	T	C	exonic	KRT15	NA	nonsynonymous SNV	KRT15:NM_002275:exon6:c.A1247G:p.K416R	exonic	ENSG00000171346	NA	nonsynonymous SNV	ENSG00000171346:ENST00000393974:exon5:c.A752G:p.K251R,ENSG00000171346:ENST00000393981:exon5:c.A752G:p.K251R,ENSG00000171346:ENST00000254043:exon6:c.A1247G:p.K416R,ENSG00000171346:ENST00000393976:exon8:c.A1247G:p.K416R	Score=325;Name=lod=28	NA	17q21.2	Score=857;Name=V$OCT1_05	NA	NA	NA	rs2305556	0.16	0.16	0.153	0.133387	0.2107	0.0565	0.1354	0.2012	0.0399	0.21	0.05	0.16	0.2	0.1695	0.23	.	.	0.001	B	0.013	B	0.003	N	0.979	P	0.98	L	-0.96	T	-1.103	T	0.000	T	0.039	2.777	15.25	2.51	0.356	0.036	1.977	2.776876	2.776876	0.16	0.225581	0.21448	NA	0.109	NA	9.7275524
679	19	5455735	5455735	G	A	exonic	ZNRF4	NA	nonsynonymous SNV	ZNRF4:NM_181710:exon1:c.G233A:p.R78Q	exonic	ENSG00000105428	NA	nonsynonymous SNV	ENSG00000105428:ENST00000222033:exon1:c.G233A:p.R78Q	NA	NA	19p13.3	NA	NA	NA	NA	rs2240744	0.21	0.21	0.202	0.197484	0.2157	0.3958	0.1326	0.0272	0.2505	0.21	0.4	0.15	0.03	0.1987	0.4	0.3	T	0.0	B	0.0	B	0.055	N	1.000	P	0	N	3.66	T	-0.918	T	0.000	T	0.026	0.483	6.622	-6.66	-1.706	-2.987	0.592	0.48322	NA	0.35	0.19182	0.052795	NA	0.188	NA	9.7271134
679	2	44099433	44099433	C	A	exonic	ABCG8	NA	nonsynonymous SNV	ABCG8:NM_022437:exon8:c.C1199A:p.T400K	exonic	ENSG00000143921	NA	nonsynonymous SNV	ENSG00000143921:ENST00000272286:exon8:c.C1199A:p.T400K	NA	NA	2p21	NA	NA	NA	NA	rs4148217	0.22	0.22	0.21	0.215655	0.2008	0.1141	0.3228	0.2912	0.1575	0.19	0.1	0.32	0.31	0.2146	0.32	0.31	T	0.059	B	0.046	B	0.012	N	1.000	P	0.49	N	-0.43	T	-1.030	T	0.000	T	0.196	1.2	9.876	3.93	1.015	1.368	9.954	1.200333	NA	0.42	0.191512	0.27281	ID=COSM1408149;OCCURENCE=1(large_intestine)	0.268	NA	9.7264214
680	17	6515454	6515454	C	T	exonic	KIAA0753	NA	nonsynonymous SNV	KIAA0753:NM_014804:exon8:c.G1330A:p.D444N	exonic	ENSG00000198920	NA	nonsynonymous SNV	ENSG00000198920:ENST00000542606:exon6:c.G433A:p.D145N,ENSG00000198920:ENST00000572370:exon7:c.G433A:p.D145N,ENSG00000198920:ENST00000361413:exon8:c.G1330A:p.D444N	NA	NA	17p13.1	NA	NA	Name=6	NA	rs2289643	0.54	0.54	0.515	0.536342	0.5149	0.7103	0.621	0.3275	0.6012	0.49	0.68	0.62	0.37	0.5595	0.68	0.41	T	0.025	B	0.005	B	0.200	N	1.000	P	1.61	L	3.04	T	-0.948	T	0.000	T	0.025	0.774	8.089	3.36	1.434	1.423	8.274	0.774006	NA	0	0.536874	0.369589	ID=COSM1130191;OCCURENCE=1(prostate)	0.609	NA	9.7220594
680	17	73552185	73552185	G	A	exonic	LLGL2	NA	nonsynonymous SNV	LLGL2:NM_001015002:exon3:c.G134A:p.R45H,LLGL2:NM_001031803:exon3:c.G134A:p.R45H,LLGL2:NM_004524:exon3:c.G134A:p.R45H	exonic	ENSG00000073350	NA	nonsynonymous SNV	ENSG00000073350:ENST00000581713:exon2:c.G134A:p.R45H,ENSG00000073350:ENST00000583658:exon2:c.G137A:p.R46H,ENSG00000073350:ENST00000167462:exon3:c.G134A:p.R45H,ENSG00000073350:ENST00000375227:exon3:c.G134A:p.R45H,ENSG00000073350:ENST00000392550:exon3:c.G134A:p.R45H,ENSG00000073350:ENST00000577200:exon3:c.G134A:p.R45H,ENSG00000073350:ENST00000578536:exon3:c.G134A:p.R45H,ENSG00000073350:ENST00000580578:exon3:c.G134A:p.R45H,ENSG00000073350:ENST00000578363:exon4:c.G134A:p.R45H,ENSG00000073350:ENST00000579392:exon4:c.G134A:p.R45H	Score=475;Name=lod=114	NA	17q25.1	NA	NA	NA	NA	rs1671036	0.42	0.42	0.393	0.409145	0.5606	0.4683	0.379	0.1165	0.6094	0.57	0.48	0.42	0.12	0.5026	0.57	0.1	T	0.054	B	0.031	B	0.014	N	0.872	P	0.895	L	1.47	T	-0.921	T	0.000	T	0.192	0.712	7.793	3.58	1.146	1.330	9.608	0.712073	NA	0.04	0.550349	0.17567	NA	0.478	NA	9.7197844
680	6	32050067	32050067	T	C	exonic	TNXB	NA	nonsynonymous SNV	TNXB:NM_019105:exon9:c.A3482G:p.H1161R	exonic	ENSG00000168477	NA	nonsynonymous SNV	ENSG00000168477:ENST00000375244:exon9:c.A3482G:p.H1161R,ENSG00000168477:ENST00000375247:exon9:c.A3482G:p.H1161R	Score=309;Name=lod=24	Name=Height	6p21.33	NA	NA	NA	NA	rs185819	0.57	0.57	0.575	0.586262	0.5507	0.6399	0.6066	0.4508	0.7362	0.55	0.63	0.61	0.49	0.5767	0.63	1	T	0.0	B	0.0	B	0.000	N	0.000	P	-2.355	N	0.65	T	-0.960	T	0.007	T	0.048	-1.751	0.01	3.96	0.658	1.334	8.740	-1.750763	NA	1	0.486242	0.458367	NA	0.558	NA	9.7196914
680	17	73089706	73089706	G	A	UTR5	SLC16A5	NM_001271765:c.-26G>A,NM_004695:c.-26G>A	NA	NA	exonic	ENSG00000170190	NA	nonsynonymous SNV	ENSG00000170190:ENST00000538213:exon2:c.G95A:p.R32K,ENSG00000170190:ENST00000584207:exon2:c.G65A:p.R22K	NA	NA	17q25.1	NA	Name=Pol2	NA	NA	rs4789134	0.24	0.24	0.211	0.239217	0.3748	0.1597	0.2939	0.0461	0.4039	0.38	0.15	0.32	0.07	0.3948	0.38	0.82	T	0.759	P	0.099	B	.	.	0.000	P	.	.	3.38	T	-0.988	T	0.000	T	0.146	2.982	15.94	2.85	1.929	2.671	11.918	2.982455	2.982455	0	0.344473	0.089767	NA	0.196	NA	9.7192604
680	19	11558275	11558275	G	A	exonic	PRKCSH	NA	nonsynonymous SNV	PRKCSH:NM_001001329:exon11:c.G871A:p.A291T,PRKCSH:NM_002743:exon11:c.G871A:p.A291T	exonic	ENSG00000130175	NA	nonsynonymous SNV	ENSG00000130175:ENST00000587327:exon10:c.G871A:p.A291T,ENSG00000130175:ENST00000589838:exon10:c.G871A:p.A291T,ENSG00000130175:ENST00000252455:exon11:c.G871A:p.A291T,ENSG00000130175:ENST00000412601:exon11:c.G871A:p.A291T,ENSG00000130175:ENST00000592741:exon11:c.G871A:p.A291T,ENSG00000130175:ENST00000591462:exon12:c.G871A:p.A291T	NA	NA	19p13.2	NA	Name=ZNF263	NA	NA	rs11557488	0.12	0.12	0.097	0.091254	0.2256	0.0248	0.1182	0.0265	0.09	0.25	0.03	0.13	0.03	0.1733	0.25	0.62	T	0.22	B	0.036	B	0.765	N	1.000	P	1.245	L	-0.65	T	-1.093	T	0.000	T	0.058	1.868	12.2	1.41	0.480	1.332	7.787	1.867674	1.867674	0.49	0.215698	0.059237	NA	0.116	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000080027.1;CLNDSDB=.;CLNDSDBID=.	9.7187354
680	6	69666684	69666684	A	G	exonic	BAI3	NA	nonsynonymous SNV	BAI3:NM_001704:exon8:c.A1508G:p.N503S	exonic	ENSG00000135298	NA	nonsynonymous SNV	ENSG00000135298:ENST00000370598:exon8:c.A1508G:p.N503S	Score=508;Name=lod=155	NA	6q12	Score=831;Name=V$OCT1_02	NA	NA	NA	rs1932618	0.89	0.89	0.89	0.905351	0.8569	0.9226	0.8977	0.9062	0.9417	0.85	0.92	0.89	0.9	0.8942	0.94	1	T	0.0	B	0.005	B	0.000	N	0.000	P	1.37	L	0.67	T	-1.071	T	0.038	T	0.053	0.209	5.125	5.19	1.347	6.443	10.524	0.20865	NA	1	0.864535	0.918293	NA	0.906	NA	9.7176984
680	6	32610495	32610495	A	G	exonic	HLA-DQA1	NA	nonsynonymous SNV	HLA-DQA1:NM_002122:exon4:c.A722G:p.Q241R	exonic	ENSG00000196735	NA	nonsynonymous SNV	ENSG00000196735:ENST00000343139:exon4:c.A722G:p.Q241R,ENSG00000196735:ENST00000374949:exon4:c.A722G:p.Q241R,ENSG00000196735:ENST00000395363:exon4:c.A722G:p.Q241R	NA	NA	6p21.32	Score=717;Name=V$HOX13_01	Name=Pol2-4H8	NA	NA	rs9272793	NA	NA	0.357	0.549321	0.5944	0.5407	0.696	0.4992	0.4755	NA	NA	NA	NA	0.5736	0.45	0.8	T	0.0	B	0.002	B	0.388	N	1.000	P	-0.975	N	4.73	T	-0.961	T	0.001	T	0.144	-3.04	0.001	-8.17	-3.647	-0.307	18.146	-3.039841	NA	0.6	0.447874	0.383698	NA	0.051	NA	9.7174594
680	1	21795288	21795288	C	T	exonic	NBPF3	NA	nonsynonymous SNV	NBPF3:NM_001256416:exon3:c.C241T:p.R81C,NBPF3:NM_032264:exon3:c.C241T:p.R81C	exonic	ENSG00000142794	NA	nonsynonymous SNV	ENSG00000142794:ENST00000318249:exon3:c.C241T:p.R81C,ENSG00000142794:ENST00000342104:exon3:c.C241T:p.R81C,ENSG00000142794:ENST00000318220:exon6:c.C73T:p.R25C,ENSG00000142794:ENST00000434838:exon7:c.C73T:p.R25C	NA	NA	1p36.12	NA	Name=CTCFL_(SC-98982),SMC3_(ab9263),CTCF_(SC-5916),CTCF_(C-20),Rad21,ELF1_(SC-631),FOXA2_(SC-6554),CTCF	Name=62	NA	rs61740199	0.02	0.02	0.018	0.0155751	0.0368	NA	0.0216	0.0023	0.0235	0.04	NA	0.03	0.002	0.0341	0.047	0.17	T	0.796	P	0.171	B	.	.	1.000	N	1.735	L	3.97	T	-0.972	T	0.002	T	0.443	0.357	5.939	-0.961	-0.346	-0.126	3.918	0.357252	NA	0.05	0.047326	0.005901	NA	0.029	NA	9.7151074
681	3	52430526	52430526	G	A	exonic	DNAH1	NA	nonsynonymous SNV	DNAH1:NM_015512:exon71:c.G11402A:p.G3801D	exonic	ENSG00000114841	NA	nonsynonymous SNV	ENSG00000114841:ENST00000490713:exon14:c.G2102A:p.G701D,ENSG00000114841:ENST00000420323:exon71:c.G11402A:p.G3801D	NA	NA	3p21.1	NA	NA	NA	NA	rs12163565	0.17	0.17	0.119	0.165935	0.1978	0.2927	0.1239	0.0219	0.227	0.2	0.25	0.14	0.03	0.2325	0.25	1	T	0.0	B	0.003	B	0.023	N	1.000	P	-1.34	N	3.2	T	-0.915	T	0.000	T	0.163	-2.059	0.006	2.35	1.034	1.873	10.132	-2.059211	NA	0.67	0.189078	0.047765	ID=COSM1566694,COSM1566695;OCCURENCE=1(large_intestine)	0.203	NA	9.7139554
681	14	59113430	59113430	G	A	exonic	DACT1	NA	nonsynonymous SNV	DACT1:NM_001079520:exon4:c.G1978A:p.G660S,DACT1:NM_016651:exon4:c.G2089A:p.G697S	exonic	ENSG00000165617	NA	nonsynonymous SNV	ENSG00000165617:ENST00000335867:exon4:c.G2089A:p.G697S,ENSG00000165617:ENST00000395151:exon4:c.G1246A:p.G416S,ENSG00000165617:ENST00000395153:exon4:c.G1978A:p.G660S,ENSG00000165617:ENST00000541264:exon4:c.G1246A:p.G416S,ENSG00000165617:ENST00000556859:exon4:c.G1246A:p.G416S	NA	NA	14q23.1	NA	Name=E2F6	Name=5	NA	rs698025	0.25	0.25	0.279	0.270168	0.1958	0.1508	0.3343	0.4281	0.2106	0.19	0.14	0.32	0.42	0.2325	0.42	0.68	T	0.002	B	0.001	B	0.295	N	1.000	P	1.24	L	0.99	T	-0.961	T	0.000	T	0.044	-0.971	0.306	0.845	-0.056	1.550	0.797	-0.970599	NA	0.34	0.191286	0.357727	NA	0.225	NA	9.7137474
681	17	7579472	7579472	G	C	exonic	TP53	NA	nonsynonymous SNV	TP53:NM_001126118:exon3:c.C98G:p.P33R,TP53:NM_000546:exon4:c.C215G:p.P72R,TP53:NM_001126112:exon4:c.C215G:p.P72R,TP53:NM_001126113:exon4:c.C215G:p.P72R,TP53:NM_001126114:exon4:c.C215G:p.P72R,TP53:NM_001276695:exon4:c.C98G:p.P33R,TP53:NM_001276696:exon4:c.C98G:p.P33R,TP53:NM_001276760:exon4:c.C98G:p.P33R,TP53:NM_001276761:exon4:c.C98G:p.P33R	exonic	ENSG00000141510	NA	nonsynonymous SNV	ENSG00000141510:ENST00000359597:exon3:c.C215G:p.P72R,ENSG00000141510:ENST00000413465:exon3:c.C215G:p.P72R,ENSG00000141510:ENST00000269305:exon4:c.C215G:p.P72R,ENSG00000141510:ENST00000420246:exon4:c.C215G:p.P72R,ENSG00000141510:ENST00000445888:exon4:c.C215G:p.P72R,ENSG00000141510:ENST00000455263:exon4:c.C215G:p.P72R,ENSG00000141510:ENST00000508793:exon4:c.C215G:p.P72R,ENSG00000141510:ENST00000604348:exon4:c.C215G:p.P72R,ENSG00000141510:ENST00000503591:exon5:c.C215G:p.P72R	NA	NA	17p13.1	NA	NA	NA	NA	rs1042522	0.6	0.6	0.515	0.542931	0.7147	0.5863	0.683	0.3313	0.5082	0.72	0.61	0.72	0.33	0.66	0.75	0.17	T	0.745	P	0.372	B	0.371	U	1.000	P	0	N	-2.05	D	-0.929	T	0.000	T	0.267	0.823	8.316	1.87	1.355	1.015	9.773	0.823228	NA	0.26	0.745233	0.405086	NA	0.572	CLINSIG=non-pathogenic|non-pathogenic|non-pathogenic|non-pathogenic;CLNDBN=CODON_72_POLYMORPHISM\x2c_(rs1042522)|not_provided|not_specified|Neoplastic_Syndromes\x2c_Hereditary;CLNREVSTAT=single|single|single|single;CLNACC=RCV000013144.1|RCV000034639.1|RCV000079202.2|RCV000132165.1;CLNDSDB=.|.|.|MedGen;CLNDSDBID=.|.|.|C0027672	9.7134004
681	9	37729786	37729786	C	T	exonic	FRMPD1	NA	nonsynonymous SNV	FRMPD1:NM_014907:exon8:c.C674T:p.A225V	exonic	ENSG00000070601	NA	nonsynonymous SNV	ENSG00000070601:ENST00000541302:exon4:c.C281T:p.A94V,ENSG00000070601:ENST00000536622:exon5:c.C140T:p.A47V,ENSG00000070601:ENST00000377765:exon8:c.C674T:p.A225V,ENSG00000070601:ENST00000539465:exon8:c.C674T:p.A225V	Score=566;Name=lod=266	NA	9p13.2	Score=810;Name=V$HNF4_01	Name=CEBPB,ZNF263	NA	NA	rs1359590	0.2	0.2	0.21	0.208067	0.2137	0.1855	0.1311	0.2224	0.2607	0.21	0.15	0.15	0.27	0.2011	0.27	1	T	0.004	B	0.007	B	0.012	N	0.000	P	-1.07	N	-0.69	T	-1.042	T	0.000	T	0.181	0.334	5.809	0.349	0.009	0.034	8.806	0.333501	NA	0.84	0.205581	0.19655	NA	0.225	NA	9.7129524
681	6	165713961	165713961	A	C	exonic	C6orf118	NA	nonsynonymous SNV	C6orf118:NM_144980:exon3:c.T768G:p.I256M	exonic	ENSG00000112539	NA	nonsynonymous SNV	ENSG00000112539:ENST00000230301:exon3:c.T768G:p.I256M,ENSG00000112539:ENST00000543069:exon3:c.T456G:p.I152M	NA	NA	6q27	NA	NA	NA	NA	rs510579	0.46	0.46	0.478	0.483626	0.3757	0.2073	0.4395	0.8207	0.455	0.39	0.23	0.42	0.84	0.3962	0.84	0.18	T	0.993	D	0.878	P	0.648	N	1.000	P	1.5	L	2.48	T	-1.055	T	0.018	T	0.082	0.061	4.334	-10.0	-3.147	-2.096	7.846	0.06136	NA	0.25	0.348721	0.746709	NA	0.464	NA	9.7127124
681	19	35506729	35506729	G	A	exonic	GRAMD1A	NA	synonymous SNV	GRAMD1A:NM_001136199:exon10:c.G1050A:p.A350A,GRAMD1A:NM_020895:exon11:c.G1071A:p.A357A	exonic	ENSG00000089351	NA	synonymous SNV	ENSG00000089351:ENST00000411896:exon10:c.G1050A:p.A350A,ENSG00000089351:ENST00000504615:exon10:c.G369A:p.A123A,ENSG00000089351:ENST00000317991:exon11:c.G1071A:p.A357A,ENSG00000089351:ENST00000599564:exon12:c.G1332A:p.A444A	NA	NA	19q13.12	NA	Name=c-Myc,Pol2	Name=37	NA	rs2290647	0.28	0.28	0.299	0.255391	0.3419	0.2183	0.3055	0.2723	0.1462	0.34	0.21	0.32	0.26	0.2897	0.34	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	0.403	6.19	-8.37	-1.894	-0.462	3.662	0.403188	NA	NA	0.322611	0.267681	NA	0.196	NA	9.7124556
681	3	125826059	125826059	T	C	exonic	ALDH1L1	NA	nonsynonymous SNV	ALDH1L1:NM_001270365:exon19:c.A2075G:p.D692G,ALDH1L1:NM_001270364:exon21:c.A2408G:p.D803G,ALDH1L1:NM_012190:exon21:c.A2378G:p.D793G	exonic	ENSG00000144908	NA	nonsynonymous SNV	ENSG00000144908:ENST00000452905:exon19:c.A2075G:p.D692G,ENSG00000144908:ENST00000273450:exon21:c.A2408G:p.D803G,ENSG00000144908:ENST00000393434:exon21:c.A2378G:p.D793G,ENSG00000144908:ENST00000472186:exon21:c.A2378G:p.D793G	NA	NA	3q21.3	NA	NA	NA	NA	rs1127717	0.19	0.19	0.18	0.198083	0.2167	0.126	0.1571	0.2284	0.2413	0.21	0.12	0.19	0.23	0.1886	0.23	0.1	T	0.03	B	0.131	B	0.012	N	0.000	P	0.745	N	-1.01	T	-1.056	T	0.000	T	0.212	1.342	10.41	3.98	1.677	3.804	10.872	1.342416	1.342416	0.06	0.215698	0.213345	NA	0.181	NA	9.7123354
681	6	31379807	31379807	C	T	exonic	MICA	NA	nonsynonymous SNV	MICA:NM_000247:exon4:c.C697T:p.R233W,MICA:NM_001177519:exon4:c.C697T:p.R233W	exonic	ENSG00000204520	NA	nonsynonymous SNV	ENSG00000204520:ENST00000421350:exon3:c.C370T:p.R124W,ENSG00000204520:ENST00000449934:exon4:c.C697T:p.R233W	NA	NA	6p21.33	NA	NA	NA	NA	rs1051798	0.32	0.32	0.176	0.364018	0.3141	0.2996	0.4063	0.4773	0.2986	0.27	0.24	0.41	0.41	0.3079	0.41	0.17	T	0.027	B	0.004	B	0.358	N	1.000	P	.	.	2.46	T	-1.004	T	0.007	T	0.18	-0.147	3.279	-5.05	-2.258	-9.749	1.846	-0.147379	NA	0.07	NA	NA	NA	0.341	NA	9.7113334
681	3	97868419	97868419	G	A	exonic	OR5H14	NA	nonsynonymous SNV	OR5H14:NM_001005514:exon1:c.G190A:p.G64R	exonic	ENSG00000236032	NA	nonsynonymous SNV	ENSG00000236032:ENST00000437310:exon1:c.G190A:p.G64R	NA	NA	3q11.2	NA	NA	NA	NA	rs4241468	0.58	0.58	0.576	0.57528	0.5298	0.5228	0.5634	0.6672	0.5603	0.54	0.58	0.52	0.7	0.5551	0.7	0.04	D	0.983	D	0.933	D	0.017	N	1.000	P	0.95	L	3.63	T	-1.058	T	0.000	T	0.262	1.958	12.5	1.57	1.380	-0.422	3.319	1.957996	1.957996	0	0.539651	0.673627	NA	0.514	NA	9.7087824
681	19	10079093	10079093	C	T	exonic	COL5A3	NA	nonsynonymous SNV	COL5A3:NM_015719:exon59:c.G4282A:p.V1428M	exonic	ENSG00000080573	NA	nonsynonymous SNV	ENSG00000080573:ENST00000264828:exon59:c.G4282A:p.V1428M	Score=371;Name=lod=43	NA	19p13.2	Score=877;Name=V$RFX1_01	NA	NA	NA	rs3815746	0.21	0.21	0.22	0.179712	0.2048	0.2222	0.1383	0.1838	0.1339	0.21	0.25	0.16	0.21	0.1989	0.26	0.24	T	0.015	B	0.004	B	0.005	N	0.997	P	0.405	N	-3.25	D	-1.061	T	0.000	T	0.044	0.275	5.488	1.72	0.861	-0.266	6.160	0.275036	NA	0.08	0.222907	0.190649	NA	0.203	NA	9.7067264
682	7	76029695	76029695	C	T	exonic	SRCRB4D	NA	nonsynonymous SNV	SRCRB4D:NM_080744:exon4:c.G383A:p.R128H	exonic	ENSG00000146700	NA	nonsynonymous SNV	ENSG00000146700:ENST00000275560:exon4:c.G383A:p.R128H	Score=513;Name=lod=162	NA	7q11.23	Score=980;Name=V$AP2GAMMA_01	NA	NA	NA	rs4728712	0.17	0.17	0.15	0.189097	0.2048	0.2421	0.255	0.0454	0.2658	0.21	0.21	0.23	0.04	0.2209	0.23	0.49	T	0.003	B	0.004	B	0.021	N	0.433	P	1.095	L	0.92	T	-1.021	T	0.000	T	0.052	2.385	13.93	2.55	0.748	-0.167	4.075	2.385104	2.385104	0.18	0.203699	0.085565	ID=COSM1452110;OCCURENCE=1(large_intestine)	0.094	NA	9.7039344
682	X	215944	215944	G	T	exonic	PLCXD1	NA	nonsynonymous SNV	PLCXD1:NM_018390:exon7:c.G914T:p.G305V	exonic	ENSG00000182378	NA	nonsynonymous SNV	ENSG00000182378:ENST00000381657:exon7:c.G914T:p.G305V,ENSG00000182378:ENST00000381663:exon7:c.G914T:p.G305V,ENSG00000182378:ENST00000399012:exon8:c.G914T:p.G305V	NA	NA	Xp22.33	NA	Name=Pol2	NA	NA	rs112920828	0.04	0.04	0.0442	NA	NA	NA	NA	NA	NA	0.07	NA	0.06	0.03	0.0588	0.074	0.2	T	0.969	D	0.711	P	0.075	N	1.000	N	.	.	.	.	-1.144	T	0.013	T	0.204	0.815	8.276	1.77	0.932	0.021	10.279	0.814518	NA	0.01	0.073673	0.041988	NA	0.007	NA	9.7008604
682	1	144922523	144922523	C	T	exonic	PDE4DIP	NA	nonsynonymous SNV	PDE4DIP:NM_001002811:exon3:c.G1373A:p.R458H,PDE4DIP:NM_001002812:exon7:c.G884A:p.R295H,PDE4DIP:NM_001198834:exon7:c.G884A:p.R295H,PDE4DIP:NM_014644:exon7:c.G884A:p.R295H,PDE4DIP:NM_001198832:exon10:c.G1082A:p.R361H	exonic	ENSG00000178104	NA	nonsynonymous SNV	ENSG00000178104:ENST00000313431:exon3:c.G1373A:p.R458H,ENSG00000178104:ENST00000479408:exon3:c.G245A:p.R82H,ENSG00000178104:ENST00000529945:exon3:c.G1373A:p.R458H,ENSG00000178104:ENST00000369349:exon7:c.G884A:p.R295H,ENSG00000178104:ENST00000369351:exon7:c.G884A:p.R295H,ENSG00000178104:ENST00000369354:exon7:c.G884A:p.R295H,ENSG00000178104:ENST00000369356:exon7:c.G884A:p.R295H,ENSG00000178104:ENST00000313382:exon10:c.G1082A:p.R361H,ENSG00000178104:ENST00000369359:exon10:c.G1295A:p.R432H,ENSG00000178104:ENST00000530740:exon10:c.G1295A:p.R432H	Score=517;Name=lod=169	NA	1q21.1	NA	NA	NA	NA	rs2455994	0.26	0.26	0.22	NA	NA	NA	NA	NA	NA	0.35	0.04	0.26	0.38	0.2909	0.38	0.16	T	0.069	B	0.022	B	.	.	1.000	D	0.345	N	4.82	T	-0.962	T	0.008	T	0.108	2.8	15.33	2.07	0.129	0.055	8.982	2.800371	2.800371	0.11	0.343532	0.341807	NA	0.188	NA	9.6989014
682	8	110448635	110448635	A	G	exonic	PKHD1L1	NA	nonsynonymous SNV	PKHD1L1:NM_177531:exon30:c.A3574G:p.T1192A	exonic	ENSG00000205038	NA	nonsynonymous SNV	ENSG00000205038:ENST00000378402:exon30:c.A3574G:p.T1192A	Score=433;Name=lod=77	NA	8q23.1	NA	NA	NA	NA	rs10093885	0.17	0.17	0.185	0.21865	0.2058	0.002	0.1542	0.3502	0.3231	0.2	0.0017	0.19	0.29	0.2146	0.31	0.79	T	0.009	B	0.022	B	0.551	N	1.000	P	1.13	L	-0.92	T	-1.070	T	0.000	T	0.121	0.399	6.168	2.94	0.314	1.811	8.051	0.399236	NA	0.16	0.214129	0.312601	NA	0.283	NA	9.6988044
682	1	152279841	152279841	G	C	exonic	FLG	NA	nonsynonymous SNV	FLG:NM_002016:exon3:c.C7521G:p.H2507Q	exonic	ENSG00000143631	NA	nonsynonymous SNV	ENSG00000143631:ENST00000368799:exon3:c.C7521G:p.H2507Q	NA	NA	1q21.3	NA	NA	NA	NA	rs3126074	0.4	0.4	0.338	0.46226	0.172	0.6548	0.451	0.5189	0.4939	0.17	0.63	0.38	0.49	0.2943	0.63	0.64	T	0.0	B	0.0	B	.	.	1.000	P	-1.59	N	3.73	T	-0.937	T	0.001	T	0.022	-0.408	2.091	-4.87	-1.444	-7.955	8.373	-0.40831	NA	0.47	0.169302	0.465956	NA	0.29	NA	9.6977314
682	6	112671611	112671611	G	A	exonic	RFPL4B	NA	nonsynonymous SNV	RFPL4B:NM_001013734:exon3:c.G701A:p.G234D	exonic	ENSG00000251258	NA	nonsynonymous SNV	ENSG00000251258:ENST00000441065:exon3:c.G701A:p.G234D	NA	NA	6q21	NA	NA	NA	NA	rs11153361	0.15	0.15	0.171	0.163339	0.2286	0.0367	0.134	0.2141	0.1789	0.22	0.04	0.16	0.19	0.1898	0.22	0.62	T	0.0	B	0.001	B	0.000	N	1.000	P	0.475	N	-0.2	T	-1.045	T	0.030	T	0.085	-0.958	0.329	-7.84	-3.102	-1.890	2.054	-0.957504	NA	NA	0.217209	0.221516	NA	0.225	NA	9.6977244
682	1	152286002	152286002	T	C	exonic	FLG	NA	nonsynonymous SNV	FLG:NM_002016:exon3:c.A1360G:p.T454A	exonic	ENSG00000143631	NA	nonsynonymous SNV	ENSG00000143631:ENST00000368799:exon3:c.A1360G:p.T454A	NA	NA	1q21.3	NA	NA	NA	NA	rs2011331	0.4	0.4	0.385	0.464058	0.173	0.6587	0.4539	0.5204	0.4939	0.18	0.63	0.38	0.49	0.2949	0.63	0.96	T	0.04	B	0.006	B	.	.	1.000	P	-0.09	N	4.4	T	-0.902	T	0.001	T	0.012	-0.076	3.629	-6.86	-3.086	-2.855	0.086	-0.075933	NA	0.03	0.169884	0.46709	NA	0.29	NA	9.6955494
682	19	8188812	8188812	C	T	exonic	FBN3	NA	nonsynonymous SNV	FBN3:NM_032447:exon22:c.G2812A:p.V938I	exonic	ENSG00000142449	NA	nonsynonymous SNV	ENSG00000142449:ENST00000270509:exon22:c.G2812A:p.V938I,ENSG00000142449:ENST00000600128:exon23:c.G2812A:p.V938I,ENSG00000142449:ENST00000601739:exon23:c.G2812A:p.V938I	Score=541;Name=lod=210	NA	19p13.2	NA	NA	NA	NA	rs35840170	0.1	0.1	0.06	0.0834665	0.0358	0.1974	0.1988	0.0083	0.0348	0.04	0.23	0.14	0.01	0.0647	0.23	0.35	T	0.646	P	0.146	B	0.002	U	0.999	P	0.68	N	-3.03	D	-1.040	T	0.000	T	0.033	1.565	11.19	-0.095	0.131	-0.124	3.908	1.565162	1.565162	0.55	0.037791	0.014526	NA	0.043	NA	9.6950424
683	14	51368610	51368610	A	G	exonic	ABHD12B	NA	nonsynonymous SNV	ABHD12B:NM_181814:exon8:c.A613G:p.I205V,ABHD12B:NM_001206673:exon10:c.A844G:p.I282V	exonic	ENSG00000131969	NA	nonsynonymous SNV	ENSG00000131969:ENST00000353130:exon8:c.A613G:p.I205V,ENSG00000131969:ENST00000395752:exon9:c.A523G:p.I175V,ENSG00000131969:ENST00000337334:exon10:c.A844G:p.I282V	Score=473;Name=lod=112	NA	14q22.1	Score=772;Name=V$EVI1_01	NA	NA	NA	rs28564871	0.3	0.3	0.273	0.283746	0.2028	0.4573	0.3876	0.1649	0.2751	0.21	0.47	0.38	0.18	0.2462	0.47	0.71	T	0.0	B	0.001	B	0.080	N	0.000	P	0.175	N	2.27	T	-0.910	T	0.000	T	0.046	0.493	6.676	3.35	0.401	0.331	5.205	0.49334	NA	0.47	0.190526	0.152746	ID=COSM33040;OCCURENCE=1(breast)	0.188	NA	9.6938074
683	1	51826921	51826921	T	C	exonic	EPS15	NA	nonsynonymous SNV	EPS15:NM_001159969:exon12:c.A1524G:p.I508M,EPS15:NM_001981:exon24:c.A2466G:p.I822M	exonic	ENSG00000085832	NA	nonsynonymous SNV	ENSG00000085832:ENST00000396122:exon13:c.A1497G:p.I499M,ENSG00000085832:ENST00000371730:exon22:c.A2064G:p.I688M,ENSG00000085832:ENST00000371733:exon24:c.A2466G:p.I822M	Score=643;Name=lod=549	NA	1p32.3	NA	NA	NA	NA	rs17567	0.23	0.23	0.266	0.233427	0.2038	0.0119	0.1643	0.5673	0.09	0.21	0.02	0.16	0.58	0.2065	0.58	0.25	T	0.001	B	0.001	B	.	.	0.000	P	-0.69	N	0.98	T	-0.947	T	0.000	T	0.053	1.631	11.41	5.85	1.492	0.672	8.804	1.631297	1.631297	0.06	0.230465	0.514299	NA	0.355	NA	9.6925684
683	1	150199123	150199123	G	T	exonic	ANP32E	NA	synonymous SNV	ANP32E:NM_001136478:exon4:c.C375A:p.G125G,ANP32E:NM_001136479:exon5:c.C354A:p.G118G,ANP32E:NM_030920:exon5:c.C498A:p.G166G	exonic	ENSG00000143401	NA	nonsynonymous SNV	ENSG00000143401:ENST00000533654:exon4:c.C332A:p.A111E	Score=409;Name=lod=61	NA	1q21.2	Score=883;Name=V$YY1_01	NA	Name=2	NA	rs7522034	0.56	0.56	0.586	0.602037	0.4304	0.5456	0.4683	0.9228	0.498	0.44	0.5	0.43	0.9	0.4619	0.9	0.55	T	0.0	B	0.0	B	.	.	0.000	P	.	.	8.07	T	-1.083	T	0.000	T	.	-1.417	0.022	-3.24	-0.475	0.015	1.400	-1.416738	NA	0.95	0.416047	0.821834	ID=COSM1179736;OCCURENCE=1(prostate)	0.587	NA	9.691653
683	9	125316350	125316350	C	T	exonic	OR1N2	NA	nonsynonymous SNV	OR1N2:NM_001004457:exon1:c.C902T:p.T301M	exonic	ENSG00000171501	NA	nonsynonymous SNV	ENSG00000171501:ENST00000373688:exon1:c.C902T:p.T301M	Score=321;Name=lod=27	NA	9q33.2	Score=871;Name=V$IK1_01	NA	NA	NA	rs1411272	0.58	0.58	0.56	0.591653	0.5457	0.6667	0.5994	0.6362	0.4959	0.54	0.62	0.59	0.59	0.5622	0.64	1	T	0.003	B	0.001	B	0.000	N	1.000	P	-0.85	N	1.26	T	-0.928	T	0.000	T	0.072	-0.755	0.802	4.56	0.800	3.075	9.473	-0.755023	NA	1	0.534535	0.621652	ID=COSM150701;OCCURENCE=1(stomach)	0.558	NA	9.6908984
683	11	124180082	124180082	A	G	exonic	OR8D1	NA	nonsynonymous SNV	OR8D1:NM_001002917:exon1:c.T581C:p.L194P	exonic	ENSG00000196341	NA	nonsynonymous SNV	ENSG00000196341:ENST00000357821:exon1:c.T581C:p.L194P	NA	NA	11q24.2	Score=901;Name=V$OCT1_06	NA	NA	NA	rs4936919	0.34	0.34	0.3	0.286542	0.4066	0.4206	0.3458	0.1543	0.1616	0.39	0.43	0.37	0.13	0.3452	0.43	0	D	0.961	D	0.866	P	0.097	U	1.000	P	1.71	L	8.4	T	-0.986	T	0.000	T	0.25	1.897	12.3	1.92	0.208	0.080	2.616	1.897451	1.897451	0	0.391137	0.199091	NA	0.203	NA	9.6903964
683	1	206669465	206669465	C	T	exonic	IKBKE	NA	nonsynonymous SNV	IKBKE:NM_001193321:exon21:c.C1883T:p.P628L,IKBKE:NM_014002:exon22:c.C2138T:p.P713L	exonic	ENSG00000143466	NA	nonsynonymous SNV	ENSG00000143466:ENST00000537984:exon21:c.C1883T:p.P628L,ENSG00000143466:ENST00000367120:exon22:c.C2138T:p.P713L	NA	NA	1q32.1	NA	NA	NA	NA	rs3748022	0.19	0.19	0.154	0.148163	0.2326	0.1935	0.3256	0.0182	0.0644	0.24	0.19	0.29	0.03	0.193	0.29	0.2	T	0.03	B	0.022	B	0.867	N	1.000	P	0.345	N	0.16	T	-1.059	T	0.000	T	0.099	2.281	13.59	3.45	1.401	1.861	8.691	2.281232	2.281232	0.21	0.21814	0.044258	ID=COSM1178403;OCCURENCE=1(prostate)	0.159	NA	9.6895934
683	19	14975427	14975427	A	G	intergenic	OR7A10,OR7A17	dist=22738;dist=15811	NA	NA	ncRNA_exonic	ENSG00000172148	NA	NA	NA	Score=284;Name=lod=19	NA	19p13.12	NA	NA	NA	NA	rs10416150	0.16	0.16	0.154	0.140375	0.175	0.1488	0.121	0.1785	0.0583	0.18	0.12	0.11	0.2	0.1357	0.24	0.03	D	.	.	.	.	0.000	U	0.999	N	.	.	.	.	-1.080	T	0.000	T	.	0.228	5.229	2.29	1.076	1.242	8.102	0.227774	NA	0.01	NA	NA	NA	0.225	NA	9.6893
683	11	119043656	119043656	C	T	exonic	NLRX1	NA	nonsynonymous SNV	NLRX1:NM_024618:exon4:c.C187T:p.P63S,NLRX1:NM_170722:exon4:c.C187T:p.P63S	exonic	ENSG00000160703	NA	nonsynonymous SNV	ENSG00000160703:ENST00000525863:exon3:c.C187T:p.P63S,ENSG00000160703:ENST00000292199:exon4:c.C187T:p.P63S,ENSG00000160703:ENST00000409109:exon4:c.C187T:p.P63S,ENSG00000160703:ENST00000409265:exon4:c.C187T:p.P63S,ENSG00000160703:ENST00000409991:exon4:c.C187T:p.P63S,ENSG00000160703:ENST00000422249:exon4:c.C187T:p.P63S,ENSG00000160703:ENST00000449394:exon4:c.C187T:p.P63S,ENSG00000160703:ENST00000454811:exon4:c.C187T:p.P63S	NA	NA	11q23.3	Score=906;Name=V$PAX4_03	NA	NA	NA	rs643423	0.64	0.64	0.641	0.682308	0.5497	0.8829	0.402	0.6936	0.7955	0.54	0.87	0.45	0.65	0.5742	0.87	0.92	T	0.005	B	0.002	B	0.777	N	1.000	P	-0.145	N	1.67	T	-0.992	T	0.000	T	0.269	-1.288	0.04	-4.75	-1.172	-2.208	11.945	-1.28751	NA	0.84	0.522352	0.650682	NA	0.754	NA	9.6870814
684	11	107917087	107917087	A	G	exonic	CUL5	NA	synonymous SNV	CUL5:NM_003478:exon3:c.A225G:p.Q75Q	exonic	ENSG00000166266	NA	synonymous SNV	ENSG00000166266:ENST00000393094:exon3:c.A225G:p.Q75Q,ENSG00000166266:ENST00000531427:exon3:c.A225G:p.Q75Q	Score=677;Name=lod=751	NA	11q22.3	Score=892;Name=V$CEBP_Q2	NA	NA	NA	rs7117111	0.67	0.67	0.638	0.662141	0.6561	0.9038	0.745	0.3691	0.7566	0.65	0.91	0.71	0.4	0.6693	0.91	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.028	T	0.000	T	.	1.042	9.257	5.81	2.210	4.341	11.997	1.042218	NA	NA	0.658795	0.396184	NA	0.601	NA	9.6824716
684	2	73868328	73868328	A	G	exonic	NAT8	NA	nonsynonymous SNV	NAT8:NM_003960:exon2:c.T428C:p.F143S	exonic	ENSG00000144035	NA	nonsynonymous SNV	ENSG00000144035:ENST00000272425:exon2:c.T428C:p.F143S	NA	Name=Chronic kidney disease	2p13.1	NA	NA	NA	NA	rs13538	0.25	0.25	0.27	0.269569	0.2097	0.005	0.2622	0.6172	0.1391	0.21	0.01	0.22	0.61	0.2186	0.61	0.74	T	0.0	B	0.0	B	0.161	N	1.000	P	-0.455	N	1.95	T	-1.012	T	0.000	T	0.065	-1.772	0.01	-7.73	-2.616	0.187	3.591	-1.771572	NA	1	0.222907	0.526782	NA	0.312	NA	9.6821264
684	19	39994711	39994711	T	C	exonic	DLL3	NA	nonsynonymous SNV	DLL3:NM_016941:exon5:c.T653C:p.L218P,DLL3:NM_203486:exon5:c.T653C:p.L218P	exonic	ENSG00000090932	NA	nonsynonymous SNV	ENSG00000090932:ENST00000205143:exon5:c.T653C:p.L218P,ENSG00000090932:ENST00000356433:exon5:c.T653C:p.L218P	Score=251;Name=lod=14	NA	19q13.2	NA	NA	NA	NA	rs1110627	0.59	0.59	0.587	0.629992	0.5596	0.6111	0.5231	0.7511	0.6339	0.56	0.55	0.53	0.75	0.5686	0.75	.	.	0.0	B	0.0	B	0.172	N	0.499	P	-2.41	N	-2.41	D	-0.971	T	0.000	T	0.111	-0.598	1.326	0.831	0.021	1.879	8.004	-0.597997	NA	0.33	0.523605	0.719927	NA	0.514	CLINSIG=non-pathogenic;CLNDBN=Jarcho-Levin_syndrome;CLNREVSTAT=single;CLNACC=RCV000034281.3;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet:SNOMED_CT;CLNDSDBID=NBK8828:C0265343:277300:ORPHA2311:61367005	9.6815284
684	6	167796319	167796319	T	C	exonic	TCP10	NA	nonsynonymous SNV	TCP10:NM_004610:exon2:c.A43G:p.S15G	exonic	ENSG00000203690	NA	nonsynonymous SNV	ENSG00000203690:ENST00000485157:exon1:c.A43G:p.S15G,ENSG00000203690:ENST00000366827:exon2:c.A43G:p.S15G,ENSG00000203690:ENST00000397829:exon2:c.A43G:p.S15G,ENSG00000203690:ENST00000476779:exon3:c.A43G:p.S15G	NA	NA	6q27	NA	NA	NA	NA	rs17855833	0.25	0.25	0.186	0.236422	0.1958	0.3839	0.2579	0.1747	0.1943	0.19	0.4	0.23	0.19	0.2459	0.4	0.64	T	0.0	B	0.0	B	.	.	1.000	P	-0.2	N	2.02	T	-0.956	T	0.005	T	0.122	-1.838	0.009	-4.04	-2.017	-2.516	4.184	-1.838222	NA	0.55	0.210883	0.215473	NA	0.174	NA	9.6807504
684	17	8701423	8701423	A	G	exonic	MFSD6L	NA	nonsynonymous SNV	MFSD6L:NM_152599:exon1:c.T1016C:p.I339T	exonic	ENSG00000185156	NA	nonsynonymous SNV	ENSG00000185156:ENST00000329805:exon1:c.T1016C:p.I339T	NA	NA	17p13.1	Score=804;Name=V$IRF7_01	Name=Pol2-4H8	NA	NA	rs34184531	0.18	0.18	0.176	0.17472	0.2316	0.13	0.1499	0.1384	0.229	0.24	0.12	0.17	0.18	0.1935	0.24	0.55	T	0.01	B	0.012	B	0.941	N	1.000	P	-0.205	N	-2.47	D	-1.137	T	0.000	T	0.026	-0.903	0.432	-0.563	-0.300	0.331	10.368	-0.902668	NA	0.31	0.228721	0.15025	NA	0.181	NA	9.6795124
684	2	241621866	241621866	C	T	exonic	AQP12B	NA	nonsynonymous SNV	AQP12B:NM_001102467:exon1:c.G389A:p.R130H	exonic	ENSG00000185176	NA	nonsynonymous SNV	ENSG00000185176:ENST00000407834:exon1:c.G389A:p.R130H	NA	NA	2q37.3	Score=761;Name=V$TCF11MAFG_01	NA	NA	NA	rs62187796	0.11	0.11	0.11	0.0932508	0.2296	0.003	0.0994	0.0265	0.1319	0.23	0.01	0.11	0.05	0.196	0.23	0.13	T	0.001	B	0.002	B	0.606	N	1.000	P	1.085	L	2.4	T	-0.971	T	0.000	T	0.047	-0.382	2.205	-2.13	-0.508	-1.901	8.346	-0.382095	NA	0.1	0.230886	0.072308	NA	0.022	NA	9.6768474
685	2	42515388	42515388	A	G	exonic	EML4	NA	nonsynonymous SNV	EML4:NM_001145076:exon10:c.A970G:p.I324V,EML4:NM_019063:exon11:c.A1144G:p.I382V	exonic	ENSG00000143924	NA	nonsynonymous SNV	ENSG00000143924:ENST00000402711:exon10:c.A970G:p.I324V,ENSG00000143924:ENST00000318522:exon11:c.A1144G:p.I382V,ENSG00000143924:ENST00000401738:exon12:c.A1177G:p.I393V	Score=499;Name=lod=142	NA	2p21	Score=821;Name=V$BRN2_01	NA	NA	NA	rs10202624	0.85	0.85	0.885	0.853634	0.8986	0.8036	0.6369	0.9705	0.8548	0.9	0.8	0.69	0.98	0.8564	0.98	1	T	0.0	B	0.0	B	0.000	N	0.000	P	-1.59	N	0.76	T	-0.938	T	0.000	T	0.16	1.182	9.806	5.67	1.409	8.008	14.879	1.181731	NA	0.85	0.903466	0.944394	NA	0.87	NA	9.6748674
685	16	55905676	55905676	C	T	splicing	CES5A	NM_001190158:exon5:c.366-1G>A,NM_001143685:exon4:c.279-1G>A,NM_145024:exon4:c.279-1G>A	NA	NA	splicing	ENSG00000159398	ENST00000521992:exon5:c.366-1G>A,ENST00000319165:exon4:c.279-1G>A,ENST00000290567:exon4:c.279-1G>A,ENST00000520435:exon4:c.279-1G>A	NA	NA	Score=346;Name=lod=34	NA	16q12.2	NA	NA	NA	NA	rs72810507	0.06	0.06	0.043	0.0477236	0.1233	0.0327	0.0504	0.0121	0.0317	0.12	0.03	0.05	0.01	0.09	0.12	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	2.836	15.45	4.89	2.633	5.842	14.293	2.836059	2.836059	NA	0.113953	0.029117	NA	0.123	NA	9.672747
685	10	124610027	124610027	G	A	exonic	FAM24B	NA	nonsynonymous SNV	FAM24B:NM_001204364:exon3:c.C5T:p.P2L,FAM24B:NM_152644:exon3:c.C5T:p.P2L	exonic	ENSG00000213185	NA	nonsynonymous SNV	ENSG00000213185:ENST00000368896:exon3:c.C5T:p.P2L,ENSG00000213185:ENST00000368898:exon3:c.C5T:p.P2L	NA	NA	10q26.13	NA	Name=USF-1,c-Fos,c-Jun	Name=48	NA	rs1891110	0.53	0.53	0.522	0.502396	0.5785	0.4931	0.4597	0.4834	0.4898	0.58	0.52	0.45	0.51	0.5284	0.58	0.23	T	0.0	B	0.0	B	0.956	U	1.000	P	.	.	1.1	T	-0.926	T	0.000	T	0.016	-1.238	0.055	3.0	0.555	1.235	5.076	-1.23818	NA	0.81	0.554884	0.5202	NA	0.464	NA	9.6715494
685	19	5866724	5866724	G	A	exonic	FUT5	NA	nonsynonymous SNV	FUT5:NM_002034:exon2:c.C1013T:p.T338M	exonic	ENSG00000130383	NA	nonsynonymous SNV	ENSG00000130383:ENST00000588525:exon2:c.C1013T:p.T338M,ENSG00000130383:ENST00000252675:exon5:c.C1013T:p.T338M	Score=313;Name=lod=25	NA	19p13.3	NA	NA	NA	NA	rs4807054	0.41	0.41	0.291	0.40016	0.3837	0.5516	0.5317	0.2254	0.4039	0.35	0.58	0.51	0.22	0.4085	0.58	0.08	T	0.64	P	0.219	B	0.927	N	1.000	P	2.375	M	1.86	T	-0.915	T	0.000	T	0.14	1.721	11.71	0.912	1.211	0.495	7.483	1.720979	1.720979	0.03	0.36997	0.241027	ID=COSM1396046;OCCURENCE=1(large_intestine)	0.21	NA	9.6711634
685	1	152281479	152281479	G	T	exonic	FLG	NA	nonsynonymous SNV	FLG:NM_002016:exon3:c.C5883A:p.H1961Q	exonic	ENSG00000143631	NA	nonsynonymous SNV	ENSG00000143631:ENST00000368799:exon3:c.C5883A:p.H1961Q	NA	NA	1q21.3	NA	NA	NA	NA	rs3126079	0.46	0.46	0.494	0.538139	0.1759	0.6607	0.4683	0.7897	0.4939	0.18	0.63	0.39	0.74	0.3173	0.74	0.59	T	0.0	B	0.0	B	.	.	1.000	P	0.255	N	5.51	T	-0.955	T	0.000	T	0.014	-0.995	0.268	-4.75	-3.868	-4.708	2.776	-0.994755	NA	1	0.172093	0.688153	NA	0.384	NA	9.6680404
685	10	105037868	105037868	C	T	exonic	INA	NA	synonymous SNV	INA:NM_032727:exon1:c.C900T:p.R300R	exonic	ENSG00000148798	NA	synonymous SNV	ENSG00000148798:ENST00000369849:exon1:c.C900T:p.R300R	Score=791;Name=lod=2184	NA	10q24.33	Score=847;Name=V$ELK1_01	NA	Name=3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.183071	NA	NA	NA	NA	NA	NA	NA	9.6666666
685	19	10939816	10939816	C	T	exonic	DNM2	NA	synonymous SNV	DNM2:NM_001005362:exon18:c.C2151T:p.D717D,DNM2:NM_004945:exon18:c.C2151T:p.D717D,DNM2:NM_001005360:exon19:c.C2163T:p.D721D,DNM2:NM_001005361:exon19:c.C2163T:p.D721D,DNM2:NM_001190716:exon19:c.C2163T:p.D721D	exonic	ENSG00000079805	NA	synonymous SNV	ENSG00000079805:ENST00000359692:exon18:c.C2151T:p.D717D,ENSG00000079805:ENST00000408974:exon18:c.C2151T:p.D717D,ENSG00000079805:ENST00000314646:exon19:c.C2163T:p.D721D,ENSG00000079805:ENST00000355667:exon19:c.C2163T:p.D721D,ENSG00000079805:ENST00000389253:exon19:c.C2163T:p.D721D,ENSG00000079805:ENST00000585892:exon19:c.C2163T:p.D721D	Score=552;Name=lod=233	NA	19p13.2	NA	Name=CTCF_(SC-5916),ZBTB33,CTCF	Name=8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.706356	NA	NA	NA	NA	NA	NA	NA	9.6666666
685	17	7406476	7406476	G	C	exonic	POLR2A	NA	synonymous SNV	POLR2A:NM_000937:exon17:c.G2793C:p.R931R	exonic	ENSG00000181222	NA	synonymous SNV	ENSG00000181222:ENST00000322644:exon17:c.G2793C:p.R931R	Score=560;Name=lod=251	NA	17p13.1	NA	Name=CTCF,Rad21,SMC3_(ab9263),CTCF_(C-20),CTCF_(SC-5916),Pol2-4H8	Name=14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000008624	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.103732	NA	NA	NA	NA	NA	NA	NA	9.666658
685	6	116325143	116325143	G	A	exonic	FRK	NA	synonymous SNV	FRK:NM_002031:exon2:c.C363T:p.I121I	exonic	ENSG00000111816	NA	synonymous SNV	ENSG00000111816:ENST00000606080:exon2:c.C363T:p.I121I	Score=540;Name=lod=209	NA	6q22.1	NA	Name=PU.1,JunD	Name=7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00001657	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4737	NA	NA	NA	NA	NA	NA	NA	9.66665
685	11	116661330	116661330	G	A	exonic	APOA5	NA	synonymous SNV	APOA5:NM_001166598:exon4:c.C615T:p.H205H,APOA5:NM_052968:exon4:c.C615T:p.H205H	exonic	ENSG00000110243	NA	synonymous SNV	ENSG00000110243:ENST00000227665:exon3:c.C615T:p.H205H,ENSG00000110243:ENST00000542499:exon4:c.C615T:p.H205H	Score=433;Name=lod=77	NA	11q23.3	Score=960;Name=V$USF_C	NA	Name=8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00001861	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.832431	NA	NA	NA	NA	NA	NA	NA	9.666648
686	16	1272275	1272275	C	T	exonic	TPSG1	NA	nonsynonymous SNV	TPSG1:NM_012467:exon5:c.G578A:p.R193H	exonic	ENSG00000116176	NA	nonsynonymous SNV	ENSG00000116176:ENST00000234798:exon5:c.G578A:p.R193H	NA	NA	16p13.3	NA	NA	NA	NA	rs143120059	0.03	0.03	0.022	0.0249601	0.0557	NA	0.0375	NA	0.044	0.06	NA	0.04	NA	0.0529	0.06	0.06	T	0.996	D	0.829	P	.	.	1.000	N	1.39	L	-2.5	D	-0.628	T	0.171	T	0.076	1.988	12.6	0.547	0.314	-0.252	2.411	1.987806	1.987806	0.09	0.060458	0.010137	ID=COSM967132;OCCURENCE=1(endometrium)	0.043	NA	9.6642754
686	11	76867745	76867745	G	A	exonic	MYO7A	NA	synonymous SNV	MYO7A:NM_000260:exon6:c.G510A:p.L170L,MYO7A:NM_001127179:exon6:c.G510A:p.L170L,MYO7A:NM_001127180:exon6:c.G510A:p.L170L	exonic	ENSG00000137474	NA	synonymous SNV	ENSG00000137474:ENST00000409709:exon6:c.G510A:p.L170L,ENSG00000137474:ENST00000409893:exon6:c.G510A:p.L170L,ENSG00000137474:ENST00000458637:exon6:c.G510A:p.L170L,ENSG00000137474:ENST00000409619:exon7:c.G477A:p.L159L	Score=525;Name=lod=181	NA	11q13.5	Score=734;Name=V$PPARG_01	NA	NA	Score=87;Name=431899_0_+_87	rs34477144	0.0018	0.0018	0.001	0.000998403	0.001	NA	0.0014	0.0015	0.001	0.0013	NA	0.01	0.002	0.0025	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.103259	NA	NA	0.002724	0	NA	NA	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000036177.1;CLNDSDB=.;CLNDSDBID=.	9.6604426
686	11	6790028	6790028	C	G	exonic	OR2AG2	NA	nonsynonymous SNV	OR2AG2:NM_001004490:exon1:c.G161C:p.R54P	exonic	ENSG00000188124	NA	nonsynonymous SNV	ENSG00000188124:ENST00000338569:exon1:c.G161C:p.R54P	NA	NA	11p15.4	NA	NA	NA	NA	rs10839616	0.23	0.23	0.246	0.288538	0.2157	0.2143	0.1671	0.3654	0.4223	0.22	0.19	0.2	0.33	0.2389	0.34	0.01	D	0.942	P	0.738	P	0.189	N	1.000	P	2.395	M	7.37	T	-0.898	T	0.000	T	0.269	0.692	7.698	0.401	0.087	-0.918	8.302	0.692473	NA	0.02	0.219972	0.340981	NA	0.362	NA	9.6587614
686	2	170493103	170493103	T	A	exonic	PPIG	NA	nonsynonymous SNV	PPIG:NM_004792:exon14:c.T1335A:p.D445E	exonic	ENSG00000138398	NA	nonsynonymous SNV	ENSG00000138398:ENST00000433207:exon11:c.T1314A:p.D438E,ENSG00000138398:ENST00000409714:exon13:c.T1290A:p.D430E,ENSG00000138398:ENST00000260970:exon14:c.T1335A:p.D445E,ENSG00000138398:ENST00000448752:exon14:c.T1335A:p.D445E	Score=730;Name=lod=1231	NA	2q31.1	NA	NA	NA	NA	rs1050354	0.55	0.55	0.581	0.584265	0.5378	0.4296	0.4625	0.7595	0.6411	0.54	0.43	0.51	0.71	0.5724	0.72	0.5	T	0.02	B	0.007	B	0.000	D	0.000	P	0.345	N	2.52	T	-1.038	T	0.000	T	0.066	0.624	7.359	4.74	1.028	0.739	10.071	0.624371	NA	0.36	0.566979	0.72484	ID=COSM148985;OCCURENCE=1(stomach)	0.609	NA	9.6561544
686	1	221054648	221054648	A	C	exonic	HLX	NA	synonymous SNV	HLX:NM_021958:exon2:c.A705C:p.A235A	exonic	ENSG00000136630	NA	synonymous SNV	ENSG00000136630:ENST00000366903:exon2:c.A705C:p.A235A	Score=567;Name=lod=268	NA	1q41	Score=860;Name=V$HAND1E47_01	Name=SUZ12	Name=75	NA	rs146391223	0.01	0.01	0.008	0.0203674	NA	0.0327	0.0086	NA	0.0644	NA	0.05	0.0028	NA	0.0104	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.098897	2.098897	NA	0.00093	0	NA	NA	NA	9.6553366
686	7	151859523	151859523	G	A	exonic	MLL3	NA	synonymous SNV	MLL3:NM_170606:exon43:c.C11139T:p.A3713A	exonic	ENSG00000055609	NA	synonymous SNV	ENSG00000055609:ENST00000424877:exon1:c.C897T:p.A299A,ENSG00000055609:ENST00000262189:exon43:c.C11139T:p.A3713A,ENSG00000055609:ENST00000355193:exon43:c.C11139T:p.A3713A	NA	NA	7q36.1	NA	NA	Name=3	NA	rs140482040	0.0005	0.0005	NA	0.00119808	0.004	NA	0.0029	NA	NA	0.0013	NA	NA	NA	0.0029	0.0045	.	.	.	.	.	.	.	.	1.000	N	.	.	.	.	.	.	.	.	.	1.401	10.62	3.4	1.268	0.630	6.324	1.40119	1.40119	NA	0.004535	0.000227	NA	NA	NA	9.6552316
687	17	10551919	10551919	G	C	exonic	MYH3	NA	synonymous SNV	MYH3:NM_002470:exon8:c.C690G:p.A230A	exonic	ENSG00000109063	NA	synonymous SNV	ENSG00000109063:ENST00000226209:exon7:c.C690G:p.A230A,ENSG00000109063:ENST00000583535:exon8:c.C690G:p.A230A	Score=488;Name=lod=128	NA	17p13.1	Score=987;Name=V$IK2_01	Name=CTCF	Name=4	NA	rs147148934	0.0032	0.0032	0.003	0.00319489	0.003	NA	0.0072	0.0008	0.0072	0.004	NA	0.01	0.002	0.0048	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.531339	NA	NA	0.004767	0.00227	NA	NA	NA	9.6540996
687	9	90500193	90500193	C	G	exonic	SPATA31E1	NA	nonsynonymous SNV	SPATA31E1:NM_178828:exon4:c.C791G:p.A264G	exonic	ENSG00000177992	NA	nonsynonymous SNV	ENSG00000177992:ENST00000325643:exon4:c.C791G:p.A264G	NA	NA	9q22.1	NA	NA	NA	NA	rs59256416	0.12	0.12	0.122	0.124201	0.0636	0.0347	0.0461	0.3464	0.0337	0.07	0.03	0.06	0.33	0.0676	0.33	0.47	T	0.541	P	0.179	B	.	.	1.000	P	0.69	N	3.9	T	-0.938	T	0.000	T	0.011	0.025	4.145	-3.39	-1.792	-0.872	3.770	0.025191	NA	0.05	0.048488	0.287108	NA	0.101	NA	9.6536454
687	14	20841707	20841707	C	T	exonic	TEP1	NA	nonsynonymous SNV	TEP1:NM_007110:exon46:c.G6640A:p.V2214I	exonic	ENSG00000129566	NA	nonsynonymous SNV	ENSG00000129566:ENST00000545983:exon17:c.G1654A:p.V552I,ENSG00000129566:ENST00000555008:exon34:c.G4669A:p.V1557I,ENSG00000129566:ENST00000556935:exon44:c.G6316A:p.V2106I,ENSG00000129566:ENST00000262715:exon46:c.G6640A:p.V2214I	NA	NA	14q11.2	Score=748;Name=V$PPARA_01	NA	NA	NA	rs1713449	0.31	0.31	0.319	0.324081	0.2187	0.3056	0.3646	0.4675	0.229	0.23	0.3	0.32	0.46	0.2579	0.46	0.38	T	0.313	B	0.079	B	0.176	N	1.000	P	0.55	N	2.19	T	-0.918	T	0.000	T	0.041	0.117	4.632	4.35	0.601	1.561	12.057	0.11739	NA	0.25	0.205465	0.409896	ID=COSM432796;OCCURENCE=1(breast)	0.217	NA	9.6512684
687	17	10551910	10551910	G	A	exonic	MYH3	NA	synonymous SNV	MYH3:NM_002470:exon8:c.C699T:p.N233N	exonic	ENSG00000109063	NA	synonymous SNV	ENSG00000109063:ENST00000226209:exon7:c.C699T:p.N233N,ENSG00000109063:ENST00000583535:exon8:c.C699T:p.N233N	NA	NA	17p13.1	Score=987;Name=V$IK2_01	Name=CTCF	Name=4	NA	rs16943604	0.01	0.01	0.01	0.0123802	0.003	NA	0.0115	0.0333	0.0072	0.004	NA	0.01	0.03	0.0075	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.040314	NA	NA	0.005	0.028824	NA	0.007	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117678.2;CLNDSDB=.;CLNDSDBID=.	9.6511666
687	6	35285720	35285720	A	C	exonic	DEF6	NA	nonsynonymous SNV	DEF6:NM_022047:exon6:c.A860C:p.N287T	exonic	ENSG00000023892	NA	nonsynonymous SNV	ENSG00000023892:ENST00000542066:exon5:c.A95C:p.N32T,ENSG00000023892:ENST00000316637:exon6:c.A860C:p.N287T	Score=371;Name=lod=43	NA	6p21.31	NA	Name=CTCF,c-Myc,HA-E2F1	Name=127	NA	rs2395617	0.9	0.9	0.882	0.907748	0.8946	0.9891	0.915	0.8162	0.956	0.88	0.99	0.89	0.84	0.9032	0.99	0.42	T	0.017	B	0.008	B	0.001	N	1.000	P	0.9	L	2.66	T	-0.983	T	0.016	T	0.004	1.86	12.18	3.57	0.261	1.680	3.846	1.859812	1.859812	0.78	0.885814	0.829778	NA	0.833	NA	9.6497194
687	22	43206950	43206950	A	C	exonic	ARFGAP3	NA	nonsynonymous SNV	ARFGAP3:NM_001142293:exon11:c.T933G:p.S311R,ARFGAP3:NM_014570:exon12:c.T1065G:p.S355R	exonic	ENSG00000242247	NA	nonsynonymous SNV	ENSG00000242247:ENST00000429508:exon10:c.T849G:p.S283R,ENSG00000242247:ENST00000437119:exon11:c.T933G:p.S311R,ENSG00000242247:ENST00000263245:exon12:c.T1065G:p.S355R	Score=363;Name=lod=40	NA	22q13.2	NA	NA	NA	NA	rs1018448	0.68	0.68	0.67	0.701877	0.5417	0.6399	0.7378	0.9206	0.6094	0.53	0.66	0.73	0.9	0.5996	0.9	0.94	T	0.0	B	0.002	B	0.003	N	0.895	P	-1.01	N	3.48	T	-1.002	T	0.000	T	0.066	-0.241	2.837	4.2	1.192	1.294	4.354	-0.241382	NA	0.43	0.545233	0.864276	NA	0.681	NA	9.6468004
687	19	37441980	37441980	A	G	exonic	ZNF568	NA	nonsynonymous SNV	ZNF568:NM_001204837:exon5:c.A1733G:p.Q578R,ZNF568:NM_001204836:exon6:c.A1733G:p.Q578R,ZNF568:NM_001204835:exon7:c.A1922G:p.Q641R,ZNF568:NM_198539:exon7:c.A1925G:p.Q642R	exonic	ENSG00000198453	NA	nonsynonymous SNV	ENSG00000198453:ENST00000415168:exon5:c.A1733G:p.Q578R,ENSG00000198453:ENST00000333987:exon7:c.A1925G:p.Q642R	NA	NA	19q13.12	NA	Name=SETDB1	NA	NA	rs1644634	0.54	0.54	0.522	0.547923	0.5636	0.3085	0.5634	0.6982	0.5644	0.57	0.32	0.57	0.72	0.5486	0.72	0.04	D	0.0	B	0.0	B	.	.	1.000	P	0.125	N	3.57	T	-0.995	T	0.000	T	0.026	-0.995	0.267	-6.21	-1.765	-0.872	5.980	-0.995235	NA	0.82	0.574561	0.705362	NA	0.543	NA	9.6465724
687	6	117622188	117622188	T	G	exonic	ROS1	NA	nonsynonymous SNV	ROS1:NM_002944:exon42:c.A6682C:p.K2228Q	exonic	ENSG00000047936	NA	nonsynonymous SNV	ENSG00000047936:ENST00000368508:exon42:c.A6682C:p.K2228Q,ENSG00000047936:ENST00000368507:exon43:c.A6664C:p.K2222Q	NA	NA	6q22.1	NA	NA	NA	NA	rs529156	0.16	0.16	0.138	0.139377	0.2197	0.1587	0.1657	0.0386	0.1544	0.23	0.15	0.17	0.04	0.2079	0.26	0.41	T	0.0	B	0.0	B	0.339	N	1.000	P	-0.55	N	-0.5	T	-1.081	T	0.048	T	0.038	0.424	6.301	4.07	1.449	1.029	5.098	0.423609	NA	0.38	0.259767	0.074217	ID=COSM150169;OCCURENCE=1(stomach)	0.087	NA	9.6459664
687	6	117622233	117622233	C	T	exonic	ROS1	NA	nonsynonymous SNV	ROS1:NM_002944:exon42:c.G6637A:p.D2213N	exonic	ENSG00000047936	NA	nonsynonymous SNV	ENSG00000047936:ENST00000368508:exon42:c.G6637A:p.D2213N,ENSG00000047936:ENST00000368507:exon43:c.G6619A:p.D2207N	Score=414;Name=lod=64	NA	6q22.1	NA	NA	NA	NA	rs529038	0.16	0.16	0.132	0.136382	0.2197	0.1587	0.1628	0.0287	0.1544	0.23	0.15	0.17	0.04	0.2084	0.26	0.51	T	0.009	B	0.015	B	0.024	N	0.981	P	0.795	N	-2.43	D	-0.914	T	0.260	T	0.03	2.286	13.6	3.19	0.754	0.902	7.372	2.286366	2.286366	0.57	0.259419	0.06877	ID=COSM150170;OCCURENCE=1(stomach)	0.087	NA	9.6458144
687	18	61565014	61565014	C	T	exonic	SERPINB2	NA	synonymous SNV	SERPINB2:NM_002575:exon5:c.C471T:p.D157D,SERPINB2:NM_001143818:exon6:c.C471T:p.D157D	exonic	ENSG00000197632,ENSG00000242550	NA	synonymous SNV	ENSG00000197632:ENST00000299502:exon5:c.C471T:p.D157D,ENSG00000197632:ENST00000413956:exon6:c.C471T:p.D157D,ENSG00000197632:ENST00000457692:exon6:c.C471T:p.D157D	Score=329;Name=lod=29	NA	18q21.33	Score=856;Name=V$STAT5A_01	NA	NA	NA	rs6106	0.06	0.06	0.066	0.0625	0.002	NA	0.0259	0.2216	NA	0.0013	NA	0.03	0.24	0.0177	0.24	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.067	T	0.000	T	.	0.825	8.325	2.87	0.418	0.916	8.494	0.825088	NA	NA	0.001395	0.177258	NA	0.109	NA	9.6455716
688	10	115910928	115910928	G	T	exonic	C10orf118	NA	nonsynonymous SNV	C10orf118:NM_018017:exon4:c.C811A:p.Q271K	exonic	ENSG00000165813	NA	nonsynonymous SNV	ENSG00000165813:ENST00000369287:exon4:c.C811A:p.Q271K	Score=586;Name=lod=320	NA	10q25.3	NA	NA	NA	NA	rs7095762	0.21	0.21	0.211	0.207268	0.2505	0.0585	0.2349	0.3434	0.1125	0.24	0.06	0.25	0.31	0.2058	0.32	1	T	0.0	B	0.0	B	0.000	N	0.000	P	-0.49	N	1.3	T	-0.972	T	0.000	T	0.012	-0.7	0.97	4.8	0.496	4.641	11.990	-0.700333	NA	1	0.235	0.317068	NA	0.167	NA	9.6420334
688	17	6683215	6683215	C	T	exonic	FBXO39	NA	nonsynonymous SNV	FBXO39:NM_153230:exon2:c.C28T:p.P10S	exonic	ENSG00000177294	NA	nonsynonymous SNV	ENSG00000177294:ENST00000321535:exon2:c.C28T:p.P10S	Score=431;Name=lod=75	NA	17p13.1	Score=755;Name=V$NRSF_01	NA	NA	NA	rs4796555	0.34	0.34	0.318	0.324681	0.2107	0.6151	0.2896	0.2148	0.316	0.21	0.66	0.25	0.22	0.2652	0.66	0.67	T	0.022	B	0.01	B	0.130	N	0.995	P	0.805	L	0.58	T	-0.934	T	0.000	T	0.045	2.013	12.69	2.26	0.813	0.928	4.791	2.013227	2.013227	0	0.218488	0.217431	NA	0.283	NA	9.6389454
688	17	47210469	47210469	G	A	exonic	B4GALNT2	NA	nonsynonymous SNV	B4GALNT2:NM_153446:exon1:c.G82A:p.E28K	exonic	ENSG00000167080	NA	nonsynonymous SNV	ENSG00000167080:ENST00000300404:exon1:c.G82A:p.E28K	NA	NA	17q21.32	NA	NA	NA	NA	rs117575112	0.05	0.05	0.035	0.0559105	0.0716	0.0724	0.0432	0.0166	0.0849	0.08	0.07	0.06	0.01	0.0658	0.08	0.35	T	0.581	P	0.086	B	.	.	0.997	N	0	N	2.1	T	-1.015	T	0.001	T	0.055	2.393	13.96	2.36	1.623	-0.172	8.357	2.392587	2.392587	NA	0.057688	0.02542	NA	0.022	NA	9.6382454
688	17	8215534	8215534	C	T	exonic	ARHGEF15	NA	synonymous SNV	ARHGEF15:NM_025014:exon2:c.C177T:p.T59T,ARHGEF15:NM_173728:exon2:c.C177T:p.T59T	exonic	ENSG00000198844	NA	synonymous SNV	ENSG00000198844:ENST00000421050:exon1:c.C177T:p.T59T,ENSG00000198844:ENST00000361926:exon2:c.C177T:p.T59T,ENSG00000198844:ENST00000579439:exon2:c.C177T:p.T59T,ENSG00000198844:ENST00000583529:exon3:c.C177T:p.T59T	Score=336;Name=lod=31	NA	17p13.1	Score=871;Name=V$YY1_01	NA	NA	NA	rs3744651	0.45	0.45	0.472	0.416933	0.3211	0.6468	0.4424	0.4062	0.2751	0.32	0.65	0.42	0.43	0.3756	0.65	0.02	D	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.951	T	0.000	T	.	0.644	7.455	2.11	0.358	-0.282	5.165	0.643538	NA	0	0.331977	0.378348	NA	0.362	NA	9.6379896
688	1	879482	879482	G	C	exonic	SAMD11	NA	synonymous SNV	SAMD11:NM_152486:exon14:c.G1995C:p.G665G	exonic	ENSG00000187634	NA	synonymous SNV	ENSG00000187634:ENST00000342066:exon14:c.G1995C:p.G665G	NA	NA	1p36.33	NA	NA	NA	NA	rs149880798	0.01	0.01	0.004	0.00399361	0.0149	NA	0.0072	NA	NA	0.02	NA	0.01	NA	0.0062	0.02	0.01	D	.	.	.	.	0.000	D	0.690	N	.	.	.	.	-0.968	T	0.056	T	.	-0.843	0.567	-5.2	-0.861	-0.113	3.898	-0.842805	NA	NA	0.008837	0.001816	NA	NA	NA	9.6367296
688	20	39797465	39797465	T	C	exonic	PLCG1	NA	nonsynonymous SNV	PLCG1:NM_002660:exon21:c.T2438C:p.I813T,PLCG1:NM_182811:exon21:c.T2438C:p.I813T	exonic	ENSG00000124181	NA	nonsynonymous SNV	ENSG00000124181:ENST00000373271:exon21:c.T2438C:p.I813T,ENSG00000124181:ENST00000373272:exon21:c.T2438C:p.I813T,ENSG00000124181:ENST00000244007:exon22:c.T2438C:p.I813T	Score=488;Name=lod=128	NA	20q12	NA	NA	NA	NA	rs753381	0.71	0.71	0.738	0.732827	0.5398	0.8075	0.6398	0.9818	0.5838	0.54	0.81	0.57	0.97	0.6155	0.97	1	T	0.0	B	0.0	B	0.000	N	0.999	P	-0.82	N	0.91	T	-0.938	T	0.000	T	0.074	1.335	10.38	5.82	1.486	1.012	15.181	1.33506	1.33506	0.46	0.542093	0.917612	NA	0.688	NA	9.6359404
688	2	10126330	10126330	G	A	exonic	GRHL1	NA	nonsynonymous SNV	GRHL1:NM_198182:exon9:c.G1189A:p.V397I	exonic	ENSG00000134317	NA	nonsynonymous SNV	ENSG00000134317:ENST00000324883:exon8:c.G622A:p.V208I,ENSG00000134317:ENST00000324907:exon9:c.G1189A:p.V397I,ENSG00000134317:ENST00000472167:exon9:c.G1189A:p.V397I,ENSG00000134317:ENST00000405379:exon10:c.G1189A:p.V397I	Score=595;Name=lod=350	NA	2p25.1	NA	NA	NA	NA	rs2303920	0.29	0.29	0.275	0.26278	0.2316	0.2599	0.402	0.3064	0.1401	0.23	0.25	0.39	0.34	0.2537	0.39	1	T	0.0	B	0.001	B	0.000	N	0.000	P	-1.465	N	2.42	T	-0.929	T	0.000	T	0.106	0.867	8.514	5.49	0.922	6.326	11.477	0.867179	NA	1	0.213023	0.311847	ID=COSM148796;OCCURENCE=1(stomach)	0.246	NA	9.6350104
689	X	76937963	76937963	G	C	exonic	ATRX	NA	nonsynonymous SNV	ATRX:NM_138270:exon8:c.C2671G:p.Q891E,ATRX:NM_000489:exon9:c.C2785G:p.Q929E	exonic	ENSG00000085224	NA	nonsynonymous SNV	ENSG00000085224:ENST00000395603:exon8:c.C2671G:p.Q891E,ENSG00000085224:ENST00000373344:exon9:c.C2785G:p.Q929E	NA	NA	Xq21.1	NA	NA	NA	NA	rs3088074	0.51	0.51	0.53418	NA	NA	NA	NA	NA	NA	0.32	0.49	0.36	0.94	0.3924	0.94	1	T	0.0	B	0.0	B	0.069	N	1.000	P	-1.525	N	-2.55	D	-0.934	T	0.000	T	0.007	-0.924	0.391	4.93	0.607	0.278	9.941	-0.923656	NA	1	0.305965	0.863103	NA	0.406	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000078959.4;CLNDSDB=.;CLNDSDBID=.	9.6349684
689	8	42036577	42036577	A	G	exonic	PLAT	NA	synonymous SNV	PLAT:NM_033011:exon12:c.T1230C:p.S410S,PLAT:NM_000930:exon13:c.T1368C:p.S456S	exonic	ENSG00000104368	NA	nonsynonymous SNV	ENSG00000104368:ENST00000270189:exon10:c.T860C:p.L287P	Score=387;Name=lod=50	NA	8p11.21	NA	NA	NA	NA	rs1136159	0.1	0.1	0.096	0.103035	0.1143	0.1885	0.0749	0.0151	0.1421	0.11	0.16	0.08	0.02	0.1273	0.16	0.15	T	.	.	.	.	.	.	0.000	P	.	.	-0.89	T	-0.990	T	0.002	T	.	1.511	11	4.04	0.895	3.768	7.900	1.511239	1.511239	0.09	0.127209	0.030867	NA	0.051	NA	9.631191
689	22	44131786	44131786	T	C	exonic	EFCAB6	NA	nonsynonymous SNV	EFCAB6:NM_198856:exon5:c.A139G:p.R47G,EFCAB6:NM_022785:exon7:c.A595G:p.R199G	exonic	ENSG00000186976	NA	nonsynonymous SNV	ENSG00000186976:ENST00000358439:exon5:c.A277G:p.R93G,ENSG00000186976:ENST00000396231:exon5:c.A139G:p.R47G,ENSG00000186976:ENST00000356087:exon6:c.A277G:p.R93G,ENSG00000186976:ENST00000262726:exon7:c.A595G:p.R199G	NA	NA	22q13.2	NA	NA	NA	NA	rs3747203	0.06	0.06	0.056	0.0748802	0.0696	0.126	0.0403	0.0015	0.1513	0.07	0.12	0.05	NA	0.0721	0.12	0.12	T	0.982	D	0.79	P	0.006	N	1.000	N	2.215	M	1.55	T	-1.030	T	0.003	T	0.423	1.997	12.63	-1.68	-0.086	0.041	16.924	1.996917	1.996917	0	0.060814	0.013618	NA	0.029	NA	9.6308194
689	2	26800422	26800422	G	A	exonic	C2orf70	NA	synonymous SNV	C2orf70:NM_001105519:exon3:c.G387A:p.T129T	exonic	ENSG00000173557	NA	nonsynonymous SNV	ENSG00000173557:ENST00000409392:exon4:c.G349A:p.G117R	NA	NA	2p23.3	Score=857;Name=V$EVI1_02	NA	NA	NA	rs1053807	0.37	0.37	0.34	0.341254	0.4642	0.2183	0.5821	0.2035	0.3569	0.46	0.25	0.6	0.2	0.4282	0.6	0	D	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.032	T	0.000	T	.	-1.335	0.031	-10.5	-4.527	-5.452	1.084	-1.334981	NA	NA	0.477197	0.239214	NA	0.399	NA	9.630403
689	22	38323507	38323507	G	T	exonic	MICALL1	NA	nonsynonymous SNV	MICALL1:NM_033386:exon9:c.G1555T:p.A519S	exonic	ENSG00000100139	NA	nonsynonymous SNV	ENSG00000100139:ENST00000215957:exon9:c.G1555T:p.A519S	Score=289;Name=lod=20	NA	22q13.1	NA	Name=ZNF263	NA	NA	rs9610875	0.17	0.17	0.155	0.167732	0.2336	0.1349	0.2637	0.0265	0.2566	0.24	0.15	0.28	0.02	0.2279	0.28	1	T	0.0	B	0.001	B	0.073	N	0.002	P	-2.215	N	0.85	T	-0.951	T	0.000	T	0.129	-0.041	3.806	1.63	-0.039	2.468	7.755	-0.040672	NA	1	0.24186	0.057195	NA	0.101	NA	9.6299734
689	12	50529736	50529736	G	A	exonic	CERS5	NA	synonymous SNV	CERS5:NM_147190:exon7:c.C753T:p.D251D	exonic	ENSG00000139624	NA	synonymous SNV	ENSG00000139624:ENST00000317551:exon7:c.C753T:p.D251D,ENSG00000139624:ENST00000551697:exon7:c.C753T:p.D251D,ENSG00000139624:ENST00000422340:exon8:c.C579T:p.D193D	Score=561;Name=lod=254	NA	12q13.12	NA	NA	NA	NA	rs3741562	0.29	0.29	0.282	0.314896	0.3479	0.1806	0.3026	0.3162	0.4264	0.34	0.19	0.3	0.31	0.3286	0.36	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.948	T	0.000	T	.	0.813	8.269	4.63	2.567	3.398	8.538	0.812981	NA	NA	0.360465	0.322288	NA	0.355	NA	9.6297016
689	7	44112873	44112873	G	T	UTR3	POLM	NM_013284:c.*17C>A	NA	NA	exonic	ENSG00000122678	NA	nonsynonymous SNV	ENSG00000122678:ENST00000395831:exon9:c.C1315A:p.H439N	NA	NA	7p13	NA	NA	NA	NA	rs3218660	0.23	0.23	0.178	0.231629	0.2336	0.1141	0.2738	0.3139	0.2096	0.24	0.12	0.28	0.31	0.2448	0.31	0	D	0.0	B	0.001	B	0.000	D	1.000	P	.	.	1.71	T	-0.964	T	0.000	T	0.057	2.36	13.85	-3.99	-1.400	-0.269	0.509	2.360374	2.360374	0	0.226163	0.314117	NA	0.196	NA	9.6287704
689	10	49420008	49420008	T	C	exonic	FRMPD2	NA	nonsynonymous SNV	FRMPD2:NM_001018071:exon13:c.A1600G:p.K534E	exonic	ENSG00000170324	NA	nonsynonymous SNV	ENSG00000170324:ENST00000305531:exon11:c.A1525G:p.K509E,ENSG00000170324:ENST00000407470:exon12:c.A1504G:p.K502E,ENSG00000170324:ENST00000374201:exon13:c.A1600G:p.K534E	Score=431;Name=lod=75	NA	10q11.22	NA	NA	NA	NA	rs1864345	0.27	0.27	0.279	0.282348	0.2535	0.0694	0.183	0.6074	0.1626	0.25	0.05	0.2	0.62	0.2337	0.62	1	T	0.0	B	0.0	B	.	.	0.000	P	-2.56	N	-1.19	T	-0.911	T	0.000	T	0.065	0.071	4.384	3.39	0.225	1.490	8.676	0.070801	NA	1	0.217442	0.542896	NA	0.348	NA	9.6286914
689	17	649505	649505	T	A	exonic	GEMIN4	NA	nonsynonymous SNV	GEMIN4:NM_015721:exon2:c.A1778T:p.E593V	exonic	ENSG00000179409	NA	nonsynonymous SNV	ENSG00000179409:ENST00000576778:exon1:c.A1745T:p.E582V,ENSG00000179409:ENST00000319004:exon2:c.A1778T:p.E593V	Score=313;Name=lod=25	NA	17p13.3	NA	NA	NA	NA	rs4968104	0.16	0.16	0.139	0.158746	0.2465	0.122	0.1772	0.0545	0.2342	0.24	0.13	0.2	0.05	0.2081	0.25	0.2	T	0.279	B	0.086	B	0.744	N	0.000	P	1.79	L	2.33	T	-0.981	T	0.000	T	0.494	-0.365	2.28	5.46	2.079	0.530	5.915	-0.36493	NA	0.37	0.251555	0.091764	ID=COSM1385279,COSM437180;OCCURENCE=1(breast),1(large_intestine)	0.232	NA	9.6271784
689	5	143200053	143200053	C	T	exonic	HMHB1	NA	nonsynonymous SNV	HMHB1:NM_021182:exon2:c.C46T:p.H16Y	exonic	ENSG00000158497	NA	nonsynonymous SNV	ENSG00000158497:ENST00000289448:exon2:c.C46T:p.H16Y	NA	NA	5q31.3	NA	NA	Name=13	NA	rs161557	0.28	0.28	0.275	0.292332	0.2227	0.3889	0.3343	0.295	0.2311	0.21	0.4	0.26	0.27	0.2652	0.4	0	D	0.021	B	0.007	B	.	.	0.990	P	.	.	0.02	T	-0.959	T	0.000	T	0.04	0.924	8.763	-2.32	-0.226	-0.312	0.189	0.924004	NA	NA	0.218773	0.254965	NA	0.399	NA	9.6266604
689	19	58774071	58774071	A	G	exonic	ZNF544	NA	nonsynonymous SNV	ZNF544:NM_014480:exon7:c.A2099G:p.Q700R	exonic	ENSG00000198131	NA	nonsynonymous SNV	ENSG00000198131:ENST00000415203:exon3:c.A2015G:p.Q672R,ENSG00000198131:ENST00000599953:exon4:c.A1673G:p.Q558R,ENSG00000198131:ENST00000600044:exon5:c.A2015G:p.Q672R,ENSG00000198131:ENST00000600220:exon5:c.A2015G:p.Q672R,ENSG00000198131:ENST00000596652:exon6:c.A2099G:p.Q700R,ENSG00000198131:ENST00000269829:exon7:c.A2099G:p.Q700R	NA	NA	19q13.43	NA	Name=ZNF274,SETDB1	NA	NA	rs260462	0.55	0.55	0.523	0.527356	0.5915	0.5873	0.5403	0.4297	0.5225	0.59	0.58	0.57	0.44	0.5475	0.59	1	T	0.03	B	0.0	B	.	.	1.000	P	-0.26	N	1.3	T	-0.971	T	0.000	T	0.01	-1.487	0.018	-5.14	-1.370	-3.353	10.032	-1.486893	NA	0.57	0.56907	0.466182	NA	0.522	NA	9.6252634
689	13	24876752	24876752	T	C	exonic	SPATA13	NA	synonymous SNV	SPATA13:NM_153023:exon12:c.T1800C:p.P600P,SPATA13:NM_001166271:exon13:c.T3675C:p.P1225P	exonic	ENSG00000182957	NA	synonymous SNV	ENSG00000182957:ENST00000409126:exon9:c.T1380C:p.P460P,ENSG00000182957:ENST00000434675:exon9:c.T1494C:p.P498P,ENSG00000182957:ENST00000399949:exon10:c.T1566C:p.P522P,ENSG00000182957:ENST00000343003:exon11:c.T1632C:p.P544P,ENSG00000182957:ENST00000382095:exon12:c.T1800C:p.P600P,ENSG00000182957:ENST00000382108:exon13:c.T3675C:p.P1225P,ENSG00000182957:ENST00000424834:exon15:c.T3675C:p.P1225P	NA	NA	13q12.12	Score=810;Name=V$SREBP1_02	NA	NA	NA	rs33990382	0.42	0.42	0.379	0.452077	0.34	0.6062	0.317	0.4977	0.4427	0.31	0.57	0.33	0.46	0.3654	0.57	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.952	T	0.000	T	.	-0.526	1.605	-8.13	-1.684	-6.924	4.272	-0.525517	NA	NA	0.336047	0.469814	NA	0.471	NA	9.6252196
690	19	9002519	9002519	G	C	exonic	MUC16	NA	nonsynonymous SNV	MUC16:NM_024690:exon51:c.C40297G:p.H13433D	exonic	ENSG00000181143	NA	nonsynonymous SNV	ENSG00000181143:ENST00000380951:exon3:c.C220G:p.H74D,ENSG00000181143:ENST00000397910:exon51:c.C40297G:p.H13433D	NA	NA	19p13.2	NA	NA	NA	NA	rs150783178	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4896	0.22	1	T	0.222	B	0.355	B	.	.	.	.	.	.	2.09	T	-1.048	T	0.000	T	0.244	-0.928	0.382	-5.49	-1.841	-3.152	5.917	-0.928	NA	1	0.219535	0.21329	NA	NA	NA	9.6241984
690	6	31239742	31239742	G	C	intronic	HLA-C	NA	NA	NA	intronic	ENSG00000204525	NA	NA	NA	NA	NA	6p21.33	NA	Name=NFKB,Oct-2,Pol2,RFX5_(N-494),Pol2-4H8,YY1_(C-20),EBF,TAF1,POU2F2	NA	NA	rs41553018	0.14	0.14	0.085	0.148762	0.1382	0.0556	0.1873	0.2443	0.0992	0.13	0.05	0.19	0.22	0.1385	0.22	0	D	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.992	T	0.042	T	0.106	0.431	6.34	-4.02	-1.166	-1.620	4.042	0.430817	NA	NA	0.099368	0.155138	NA	0.072	NA	9.623932
690	22	19951816	19951816	C	T	exonic	COMT	NA	synonymous SNV	COMT:NM_007310:exon3:c.C459T:p.L153L,COMT:NM_000754:exon5:c.C609T:p.L203L,COMT:NM_001135161:exon5:c.C609T:p.L203L,COMT:NM_001135162:exon5:c.C609T:p.L203L	exonic	ENSG00000093010	NA	synonymous SNV	ENSG00000093010:ENST00000449653:exon3:c.C459T:p.L153L,ENSG00000093010:ENST00000361682:exon5:c.C609T:p.L203L,ENSG00000093010:ENST00000403184:exon5:c.C609T:p.L203L,ENSG00000093010:ENST00000403710:exon5:c.C609T:p.L203L,ENSG00000093010:ENST00000406520:exon5:c.C609T:p.L203L,ENSG00000093010:ENST00000412786:exon5:c.C609T:p.L203L,ENSG00000093010:ENST00000407537:exon6:c.C459T:p.L153L	Score=407;Name=lod=60	NA	22q11.21	NA	NA	NA	NA	rs165631	0.01	0.01	0.004	0.0091853	0.0179	NA	0.0144	0.0008	0.0174	0.01	NA	0.02	NA	0.0107	0.02	.	.	.	.	.	.	0.000	D	1.000	D	.	.	-0.61	T	-0.944	T	0.134	T	.	-0.561	1.468	-1.1	0.047	-0.326	3.857	-0.560505	NA	NA	0.014419	0.002497	NA	0.007	NA	9.6236476
690	12	95927762	95927762	T	C	exonic	USP44	NA	nonsynonymous SNV	USP44:NM_001042403:exon2:c.A271G:p.T91A,USP44:NM_032147:exon2:c.A271G:p.T91A	exonic	ENSG00000136014	NA	nonsynonymous SNV	ENSG00000136014:ENST00000552440:exon1:c.A271G:p.T91A,ENSG00000136014:ENST00000258499:exon2:c.A271G:p.T91A,ENSG00000136014:ENST00000393091:exon2:c.A271G:p.T91A,ENSG00000136014:ENST00000537435:exon2:c.A271G:p.T91A,ENSG00000136014:ENST00000549639:exon2:c.A271G:p.T91A,ENSG00000136014:ENST00000551837:exon3:c.A271G:p.T91A	Score=658;Name=lod=628	NA	12q22	Score=890;Name=V$GATA1_05	NA	NA	NA	rs3812813	0.69	0.69	0.68	0.716054	0.5577	0.7242	0.7089	0.8646	0.6748	0.55	0.7	0.68	0.88	0.612	0.88	1	T	0.0	B	0.001	B	0.000	N	0.999	P	-1.155	N	1.61	T	-0.965	T	0.000	T	0.176	-0.208	2.992	4.22	0.647	1.532	9.607	-0.207916	NA	1	0.542093	0.800045	NA	0.761	NA	9.6215404
690	10	115334124	115334124	C	T	exonic	HABP2	NA	synonymous SNV	HABP2:NM_001177660:exon3:c.C105T:p.H35H,HABP2:NM_004132:exon3:c.C183T:p.H61H	exonic	ENSG00000148702	NA	nonsynonymous SNV	ENSG00000148702:ENST00000537906:exon4:c.C149T:p.T50M	NA	NA	10q25.3	Score=863;Name=V$AHRARNT_01	NA	NA	NA	rs3740530	0.54	0.54	0.518	0.534545	0.6183	0.6042	0.6354	0.2965	0.6268	0.62	0.62	0.64	0.27	0.6235	0.64	0	D	0.99	D	0.584	P	.	.	1.000	P	.	.	.	.	-0.941	T	0.000	T	.	0.114	4.611	2.41	0.729	0.639	6.047	0.113538	NA	NA	0.638488	0.359737	NA	0.457	NA	9.619712
690	11	10503736	10503736	C	T	exonic	AMPD3	NA	nonsynonymous SNV	AMPD3:NM_001172431:exon3:c.C76T:p.R26W,AMPD3:NM_000480:exon4:c.C580T:p.R194W,AMPD3:NM_001025389:exon4:c.C553T:p.R185W,AMPD3:NM_001025390:exon4:c.C574T:p.R192W,AMPD3:NM_001172430:exon4:c.C553T:p.R185W	exonic	ENSG00000133805	NA	nonsynonymous SNV	ENSG00000133805:ENST00000444303:exon3:c.C76T:p.R26W,ENSG00000133805:ENST00000396553:exon4:c.C553T:p.R185W,ENSG00000133805:ENST00000396554:exon4:c.C580T:p.R194W,ENSG00000133805:ENST00000528723:exon4:c.C574T:p.R192W,ENSG00000133805:ENST00000529507:exon4:c.C553T:p.R185W,ENSG00000133805:ENST00000529834:exon4:c.C553T:p.R185W,ENSG00000133805:ENST00000534047:exon4:c.C580T:p.R194W,ENSG00000133805:ENST00000524866:exon5:c.C553T:p.R185W	NA	NA	11p15.4	NA	NA	NA	NA	rs11042836	0.03	0.03	0.027	0.0229633	0.0755	NA	0.0346	0.003	0.0112	0.07	NA	0.04	0.01	0.054	0.085	0.02	D	0.977	D	0.462	P	0.570	N	1.000	N	0.895	L	1.27	T	-1.091	T	0.004	T	0.126	2.909	15.69	-1.45	-0.101	-0.216	3.280	2.909453	2.909453	0.02	0.084886	0.016356	NA	0.014	NA	9.6189474
690	17	74387284	74387284	C	T	exonic	UBE2O	NA	nonsynonymous SNV	UBE2O:NM_022066:exon18:c.G3619A:p.G1207S	exonic	ENSG00000175931	NA	nonsynonymous SNV	ENSG00000175931:ENST00000319380:exon18:c.G3619A:p.G1207S	Score=333;Name=lod=30	NA	17q25.1	NA	NA	NA	NA	rs3803739	0.4	0.4	0.357	0.390176	0.5865	0.3839	0.4755	0.1006	0.5256	0.6	0.34	0.45	0.12	0.5341	0.6	0.77	T	0.437	B	0.098	B	0.446	N	0.045	P	1.1	L	-0.73	T	-0.978	T	0.000	T	0.146	2.861	15.53	3.61	1.126	2.578	14.020	2.861116	2.861116	0.5	0.594302	0.188606	ID=COSM148348;OCCURENCE=1(stomach)	0.275	NA	9.6184314
690	12	6153514	6153514	A	G	exonic	VWF	NA	synonymous SNV	VWF:NM_000552:exon18:c.T2385C:p.Y795Y	exonic	ENSG00000110799	NA	synonymous SNV	ENSG00000110799:ENST00000261405:exon18:c.T2385C:p.Y795Y	Score=525;Name=lod=181	Name=Coagulation factor levels	12p13.31	Score=803;Name=V$PPARA_01	Name=c-Fos,AP-2alpha,JunD,AP-2gamma,c-Myc	Name=29	NA	rs1063857	0.34	0.34	0.339	0.336462	0.3678	0.0913	0.2406	0.6377	0.2178	0.38	0.08	0.27	0.65	0.3231	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.338935	1.338935	NA	0.357558	0.568089	NA	0.442	NA	9.6182086
690	9	139973820	139973820	C	T	exonic	UAP1L1	NA	nonsynonymous SNV	UAP1L1:NM_207309:exon5:c.C956T:p.A319V	exonic	ENSG00000197355	NA	nonsynonymous SNV	ENSG00000197355:ENST00000360271:exon3:c.C587T:p.A196V,ENSG00000197355:ENST00000409858:exon5:c.C956T:p.A319V	NA	NA	9q34.3	NA	NA	Name=4	NA	rs7037849	0.48	0.48	0.454	0.489217	0.3996	0.6528	0.4452	0.4834	0.4519	0.39	0.66	0.46	0.44	0.4315	0.66	0.04	D	0.787	P	0.34	B	0.372	N	1.000	P	1.59	L	2.26	T	-1.004	T	0.000	T	0.054	1.277	10.17	0.091	0.092	1.006	11.789	1.276808	1.276808	0.12	0.386047	0.470268	NA	0.196	NA	9.6161864
690	16	81056441	81056441	T	G	exonic	CENPN	NA	stoploss	CENPN:NM_018455:exon7:c.T613G:p.X205E	exonic	ENSG00000166451	NA	stoploss	ENSG00000166451:ENST00000299572:exon7:c.T613G:p.X205E	NA	NA	16q23.2	NA	NA	NA	NA	rs3743503	0.14	0.14	0.128	0.132588	0.1262	0.2063	0.1369	0.0658	0.1503	0.13	0.21	0.15	0.07	0.1412	0.21	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	.	.	.	.	.	-0.733	0.869	-8.33	-1.710	0.047	2.288	-0.732616	NA	0.97	0.116628	0.066985	NA	0.065	NA	9.615972
690	3	15276562	15276562	G	A	exonic	CAPN7	NA	synonymous SNV	CAPN7:NM_014296:exon12:c.G1317A:p.A439A	exonic	ENSG00000131375	NA	synonymous SNV	ENSG00000131375:ENST00000253693:exon12:c.G1317A:p.A439A	Score=544;Name=lod=216	NA	3p25.1	NA	NA	NA	NA	rs35189473	0.01	0.01	0.008	0.0123802	0.0159	0.001	0.0058	NA	0.0419	0.02	0.0017	0.01	NA	0.018	0.02	.	.	.	.	.	.	.	.	1.000	D	.	.	.	.	-0.918	T	0.088	T	.	1.322	10.34	-4.67	-0.778	-0.196	7.953	1.322481	1.322481	NA	0.01686	0.004085	NA	NA	NA	9.6159066
690	14	75142606	75142606	G	A	exonic	AREL1	NA	synonymous SNV	AREL1:NM_001039479:exon8:c.C876T:p.G292G	exonic	ENSG00000119682	NA	synonymous SNV	ENSG00000119682:ENST00000555330:exon6:c.C876T:p.G292G,ENSG00000119682:ENST00000556202:exon7:c.C393T:p.G131G,ENSG00000119682:ENST00000356357:exon8:c.C876T:p.G292G	Score=589;Name=lod=330	NA	14q24.3	Score=764;Name=V$PAX6_01	NA	NA	NA	rs35864766	0.01	0.01	0.005	0.00698882	0.0129	NA	0.0101	0.0008	0.0143	0.01	NA	0.01	0.002	0.0151	0.023	.	.	.	.	.	.	.	.	1.000	D	.	.	.	.	-1.012	T	0.055	T	.	1.112	9.535	-1.44	-0.091	-0.124	0.163	1.11193	NA	NA	0.023114	0.005234	NA	NA	NA	9.6155526
691	3	159997061	159997061	T	A	exonic	IFT80	NA	nonsynonymous SNV	IFT80:NM_001190242:exon15:c.A1345T:p.T449S,IFT80:NM_020800:exon16:c.A1756T:p.T586S,IFT80:NM_001190241:exon17:c.A1345T:p.T449S	exonic	ENSG00000068885,ENSG00000248710	NA	nonsynonymous SNV	ENSG00000248710:ENST00000483754:exon14:c.A2269T:p.T757S,ENSG00000068885:ENST00000483465:exon15:c.A1345T:p.T449S,ENSG00000068885:ENST00000326448:exon16:c.A1756T:p.T586S,ENSG00000068885:ENST00000496589:exon17:c.A1345T:p.T449S	Score=436;Name=lod=79	NA	3q25.33	NA	NA	NA	NA	rs6778728	0.26	0.26	0.281	0.261382	0.2356	0.0685	0.1859	0.5598	0.137	0.23	0.06	0.21	0.55	0.2311	0.55	1	T	0.0	B	0.0	B	0.002	N	1.000	P	-1.85	N	0.38	T	-0.925	T	0.000	T	0.032	0.315	5.706	2.54	-0.015	2.644	5.843	0.314848	NA	1	0.251744	0.473445	NA	0.232	NA	9.6148894
691	7	37890267	37890267	G	A	exonic	NME8	NA	nonsynonymous SNV	NME8:NM_016616:exon5:c.G128A:p.R43K	exonic	ENSG00000086288	NA	nonsynonymous SNV	ENSG00000086288:ENST00000440017:exon4:c.G128A:p.R43K,ENSG00000086288:ENST00000199447:exon5:c.G128A:p.R43K	Score=533;Name=lod=195	NA	7p14.1	NA	NA	NA	NA	rs2722372	0.27	0.27	0.281	0.245208	0.2475	0.1815	0.2161	0.4092	0.1074	0.24	0.21	0.22	0.45	0.2301	0.45	1	T	0.0	B	0.0	B	0.000	N	0.000	P	-0.54	N	4.61	T	-0.955	T	0.000	T	0.165	-0.07	3.659	3.85	0.339	3.615	8.864	-0.069882	NA	1	0.243023	0.368588	NA	0.283	NA	9.6127104
691	21	31869286	31869286	T	C	exonic	KRTAP19-4	NA	nonsynonymous SNV	KRTAP19-4:NM_181610:exon1:c.A143G:p.Y48C	exonic	ENSG00000186967	NA	nonsynonymous SNV	ENSG00000186967:ENST00000334058:exon1:c.A143G:p.Y48C	NA	NA	21q22.11	NA	NA	NA	NA	rs2298437	0.57	0.57	0.581	0.614217	0.5606	0.3194	0.6571	0.82	0.6646	0.54	0.33	0.67	0.84	0.5833	0.84	0	D	0.0	B	0.001	B	.	.	1.000	P	.	.	3.19	T	-1.036	T	0.000	T	0.058	0.586	7.165	-4.2	-1.323	-1.290	4.858	0.586432	NA	NA	0.57814	0.748071	NA	0.659	NA	9.6112934
691	12	65462623	65462623	A	G	exonic	WIF1	NA	synonymous SNV	WIF1:NM_007191:exon4:c.T459C:p.D153D	exonic	ENSG00000156076	NA	synonymous SNV	ENSG00000156076:ENST00000546001:exon3:c.T273C:p.D91D,ENSG00000156076:ENST00000286574:exon4:c.T459C:p.D153D	Score=586;Name=lod=321	NA	12q14.3	NA	NA	NA	NA	rs34105816	0.01	0.01	0.006	0.0109824	0.0179	NA	0.049	0.0008	0.002	0.02	NA	0.03	0.002	0.0168	0.03	.	.	.	.	.	.	.	.	1.000	D	.	.	.	.	-1.016	T	0.075	T	.	0.949	8.87	3.15	0.477	-0.138	5.725	0.949111	NA	NA	0.02093	0.003858	NA	NA	NA	9.6110366
691	5	162909716	162909716	C	T	exonic	HMMR	NA	nonsynonymous SNV	HMMR:NM_001142557:exon10:c.C1193T:p.A398V,HMMR:NM_012485:exon12:c.C1406T:p.A469V,HMMR:NM_001142556:exon13:c.C1454T:p.A485V,HMMR:NM_012484:exon13:c.C1451T:p.A484V	exonic	ENSG00000072571	NA	nonsynonymous SNV	ENSG00000072571:ENST00000432118:exon10:c.C1193T:p.A398V,ENSG00000072571:ENST00000353866:exon12:c.C1406T:p.A469V,ENSG00000072571:ENST00000358715:exon13:c.C1451T:p.A484V,ENSG00000072571:ENST00000393915:exon13:c.C1454T:p.A485V,ENSG00000072571:ENST00000416990:exon13:c.C1109T:p.A370V	NA	NA	5q34	NA	NA	NA	NA	rs299295	0.2	0.2	0.2	0.215655	0.2525	0.0724	0.1888	0.2905	0.2434	0.25	0.05	0.21	0.26	0.2326	0.29	1	T	0.0	B	0.0	B	0.339	N	1.000	P	-1.7	N	3.83	T	-0.957	T	0.000	T	0.035	-1.548	0.015	4.27	1.068	2.306	8.185	-1.548218	NA	1	0.237907	0.290059	NA	0.225	NA	9.6103264
691	7	140125750	140125750	T	C	exonic	RAB19	NA	nonsynonymous SNV	RAB19:NM_001008749:exon4:c.T454C:p.Y152H	exonic	ENSG00000146955	NA	nonsynonymous SNV	ENSG00000146955:ENST00000356407:exon3:c.T454C:p.Y152H,ENSG00000146955:ENST00000537763:exon4:c.T454C:p.Y152H,ENSG00000146955:ENST00000275874:exon5:c.T595C:p.Y199H	NA	NA	7q34	NA	NA	Name=6	NA	rs2948386	0.13	0.13	0.114	0.146366	0.2396	0.0704	0.1153	0.0356	0.3006	0.25	0.06	0.12	0.04	0.2189	0.27	.	.	0.0	B	0.001	B	0.187	N	1.000	P	-1.305	N	-1.27	T	-1.051	T	0.000	T	0.045	1.43	10.72	-6.44	-0.983	-0.209	19.431	1.430357	1.430357	0.49	0.267674	0.061053	NA	0.123	NA	9.6071594
691	14	104452640	104452640	G	A	exonic	TDRD9	NA	synonymous SNV	TDRD9:NM_153046:exon8:c.G1098A:p.L366L	exonic	ENSG00000156414	NA	synonymous SNV	ENSG00000156414:ENST00000339063:exon8:c.G1098A:p.L366L,ENSG00000156414:ENST00000409874:exon8:c.G1098A:p.L366L	Score=425;Name=lod=71	NA	14q32.33	Score=893;Name=V$RORA1_01	NA	NA	NA	rs10143389	0.32	0.32	0.317	0.322085	0.3588	0.3343	0.3516	0.2731	0.317	0.36	0.32	0.33	0.27	0.3549	0.36	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.967	T	0.000	T	.	0.854	8.454	3.9	0.772	1.987	7.929	0.853663	NA	NA	0.346977	0.300953	ID=COSM147851,COSM147850;OCCURENCE=1(stomach)	0.312	NA	9.6059896
691	18	61570529	61570529	C	G	exonic	SERPINB2	NA	nonsynonymous SNV	SERPINB2:NM_002575:exon8:c.C1238G:p.S413C,SERPINB2:NM_001143818:exon9:c.C1238G:p.S413C	exonic	ENSG00000197632	NA	nonsynonymous SNV	ENSG00000197632:ENST00000299502:exon8:c.C1238G:p.S413C,ENSG00000197632:ENST00000457692:exon9:c.C1238G:p.S413C	Score=399;Name=lod=56	NA	18q21.33	NA	Name=Pol2(b)	NA	NA	rs6104	0.33	0.33	0.326	0.349042	0.2296	0.499	0.3559	0.3669	0.2883	0.22	0.46	0.33	0.35	0.2811	0.46	1	T	0.003	B	0.005	B	0.008	N	0.000	P	0.475	N	-1.87	D	-1.004	T	0.000	T	0.034	-0.386	2.187	1.29	0.381	0.425	1.553	-0.3862	NA	1	0.217326	0.368588	NA	0.275	NA	9.6053074
692	13	31848657	31848657	C	T	exonic	B3GALTL	NA	synonymous SNV	B3GALTL:NM_194318:exon9:c.C672T:p.Y224Y	exonic	ENSG00000187676	NA	synonymous SNV	ENSG00000187676:ENST00000343307:exon9:c.C672T:p.Y224Y	Score=456;Name=lod=95	NA	13q12.3	Score=760;Name=V$PPARA_01	NA	Name=27	NA	rs35019745	0.01	0.01	0.01	0.00559105	0.0219	NA	0.0043	NA	0.0031	0.02	NA	0.0028	NA	0.0174	0.023	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.798008	NA	NA	0.022791	0.004766	NA	NA	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000082790.1;CLNDSDB=.;CLNDSDBID=.	9.6045756
692	7	897492	897492	A	G	exonic	SUN1	NA	synonymous SNV	SUN1:NM_001171944:exon11:c.A1113G:p.T371T,SUN1:NM_025154:exon12:c.A1173G:p.T391T,SUN1:NM_001130965:exon13:c.A1422G:p.T474T	exonic	ENSG00000164828	NA	synonymous SNV	ENSG00000164828:ENST00000413514:exon9:c.A816G:p.T272T,ENSG00000164828:ENST00000429178:exon11:c.A1197G:p.T399T,ENSG00000164828:ENST00000452783:exon11:c.A1113G:p.T371T,ENSG00000164828:ENST00000389574:exon12:c.A1173G:p.T391T,ENSG00000164828:ENST00000425407:exon12:c.A1173G:p.T391T,ENSG00000164828:ENST00000401592:exon13:c.A1422G:p.T474T,ENSG00000164828:ENST00000405266:exon14:c.A1533G:p.T511T,ENSG00000164828:ENST00000456758:exon19:c.A1989G:p.T663T	NA	NA	7p22.3	NA	NA	Name=8	NA	rs10950789	0.44	0.44	0.421	0.436901	0.3479	0.4821	0.4669	0.5144	0.3558	0.35	0.51	0.48	0.48	0.388	0.51	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.907	T	0.000	T	.	0.288	5.56	-6.38	-1.729	-0.960	0.219	0.288222	NA	NA	0.326731	0.479971	NA	0.478	NA	9.6040356
692	21	31812772	31812772	C	A	exonic	KRTAP15-1	NA	nonsynonymous SNV	KRTAP15-1:NM_181623:exon1:c.C127A:p.L43M	exonic	ENSG00000186970	NA	nonsynonymous SNV	ENSG00000186970:ENST00000334067:exon1:c.C127A:p.L43M	Score=278;Name=lod=18	NA	21q22.11	NA	NA	NA	NA	rs2832873	0.53	0.53	0.525	0.554113	0.5736	0.2788	0.6427	0.6543	0.6196	0.55	0.3	0.65	0.67	0.5698	0.67	0.04	D	0.956	P	0.622	P	0.136	N	1.000	P	2.325	M	3.86	T	-0.936	T	0.000	T	0.059	1.981	12.58	0.826	0.140	0.037	3.575	1.980915	1.980915	0.03	0.586395	0.644349	NA	0.659	NA	9.6035384
692	18	61570503	61570503	C	G	exonic	SERPINB2	NA	nonsynonymous SNV	SERPINB2:NM_002575:exon8:c.C1212G:p.N404K,SERPINB2:NM_001143818:exon9:c.C1212G:p.N404K	exonic	ENSG00000197632	NA	nonsynonymous SNV	ENSG00000197632:ENST00000299502:exon8:c.C1212G:p.N404K,ENSG00000197632:ENST00000457692:exon9:c.C1212G:p.N404K	NA	NA	18q21.33	NA	Name=Pol2(b)	NA	NA	rs6103	0.33	0.33	0.328	0.349441	0.2296	0.499	0.3559	0.3676	0.2894	0.22	0.46	0.33	0.35	0.2829	0.46	0.75	T	0.0	B	0.001	B	0.215	N	1.000	P	-0.12	N	2.76	T	-0.960	T	0.000	T	0.018	-1.839	0.009	-2.38	-0.415	-1.506	4.321	-1.839191	NA	1	0.218256	0.368588	NA	0.283	NA	9.6025774
692	7	51111340	51111340	C	T	exonic	COBL	NA	synonymous SNV	COBL:NM_015198:exon8:c.G1146A:p.P382P	exonic	ENSG00000106078	NA	synonymous SNV	ENSG00000106078:ENST00000431948:exon7:c.G801A:p.P267P,ENSG00000106078:ENST00000445054:exon7:c.G822A:p.P274P,ENSG00000106078:ENST00000265136:exon8:c.G1146A:p.P382P,ENSG00000106078:ENST00000395542:exon10:c.G1392A:p.P464P	NA	NA	7p12.1	Score=882;Name=V$E47_02	NA	NA	NA	rs61737951	0.01	0.01	0.007	0.00698882	0.0258	NA	0.0072	NA	0.0041	0.03	NA	0.01	NA	0.019	0.03	.	.	.	.	.	.	.	.	1.000	N	.	.	.	.	-1.089	T	0.013	T	.	0.09	4.487	-10.0	-3.811	-4.607	1.727	0.090279	NA	NA	0.021395	0.004766	NA	0.007	NA	9.6004716
692	14	25100282	25100282	A	G	exonic	GZMB	NA	nonsynonymous SNV	GZMB:NM_004131:exon5:c.T739C:p.Y247H	exonic	ENSG00000100453	NA	nonsynonymous SNV	ENSG00000100453:ENST00000216341:exon5:c.T739C:p.Y247H,ENSG00000100453:ENST00000382540:exon5:c.T604C:p.Y202H,ENSG00000100453:ENST00000382542:exon5:c.T841C:p.Y281H,ENSG00000100453:ENST00000415355:exon5:c.T703C:p.Y235H	NA	NA	14q12	NA	Name=TCF4,FOXA1_(SC-101058),FOXA1_(C-20)	Name=33	NA	rs2236338	0.27	0.27	0.274	0.291933	0.2495	0.2986	0.2075	0.3298	0.3374	0.25	0.26	0.23	0.33	0.246	0.33	0.17	T	0.001	B	0.003	B	0.578	N	1.000	P	0.625	N	-2.53	D	-1.111	T	0.000	T	0.011	-0.736	0.858	-1.58	-0.409	-0.197	3.501	-0.736322	NA	0.15	0.238372	0.317975	ID=COSM147756;OCCURENCE=1(stomach)	0.275	NA	9.5994614
692	1	27676925	27676925	G	A	exonic	SYTL1	NA	synonymous SNV	SYTL1:NM_001193308:exon10:c.G954A:p.K318K,SYTL1:NM_032872:exon10:c.G918A:p.K306K	exonic	ENSG00000142765	NA	synonymous SNV	ENSG00000142765:ENST00000543823:exon9:c.G954A:p.K318K,ENSG00000142765:ENST00000318074:exon10:c.G918A:p.K306K	Score=412;Name=lod=63	NA	1p36.11	NA	NA	NA	NA	rs6702341	0.25	0.25	0.213	0.244808	0.3787	0.1786	0.2089	0.1392	0.3436	0.39	0.17	0.22	0.15	0.3132	0.39	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.917	T	0.000	T	.	1.546	11.12	3.87	2.155	0.998	6.072	1.546023	1.546023	NA	0.37593	0.169088	NA	0.225	NA	9.5988366
693	1	207881557	207881557	A	G	exonic	CR1L	NA	nonsynonymous SNV	CR1L:NM_175710:exon10:c.A1363G:p.I455V	exonic	ENSG00000197721	NA	nonsynonymous SNV	ENSG00000197721:ENST00000508064:exon10:c.A1363G:p.I455V	NA	NA	1q32.2	NA	Name=AP-2gamma,STAT3,AP-2alpha	Name=11	NA	rs6683902	0.68	0.68	0.677	0.705272	0.5626	0.8819	0.4755	0.7753	0.7382	0.56	0.87	0.5	0.75	0.6086	0.87	0.72	T	0.0	B	0.0	B	.	.	1.000	P	0.77	N	1.91	T	-0.993	T	0.000	T	0.025	-2.374	0.004	-3.34	-0.914	-2.039	3.512	-2.373647	NA	NA	0.567242	0.725738	NA	0.565	NA	9.5948914
693	8	87519315	87519315	T	G	exonic	RMDN1	NA	nonsynonymous SNV	RMDN1:NM_016033:exon2:c.A156C:p.K52N	exonic	ENSG00000176623	NA	nonsynonymous SNV	ENSG00000176623:ENST00000406452:exon2:c.A156C:p.K52N,ENSG00000176623:ENST00000430676:exon2:c.A156C:p.K52N,ENSG00000176623:ENST00000519966:exon2:c.A156C:p.K52N,ENSG00000176623:ENST00000521045:exon2:c.A24C:p.K8N,ENSG00000176623:ENST00000522804:exon2:c.A156C:p.K52N,ENSG00000176623:ENST00000523370:exon2:c.A24C:p.K8N,ENSG00000176623:ENST00000523911:exon2:c.A24C:p.K8N,ENSG00000176623:ENST00000524172:exon2:c.A24C:p.K8N	Score=459;Name=lod=98	NA	8q21.3	NA	NA	NA	NA	rs6980476	0.17	0.17	0.153	0.153355	0.2515	0.0496	0.134	0.1725	0.1472	0.26	0.06	0.17	0.16	0.2168	0.27	.	.	0.021	B	0.012	B	0.090	N	0.000	P	1.6	L	1.31	T	-1.045	T	0.000	T	0.179	1.992	12.62	3.26	0.747	2.340	5.852	1.991542	1.991542	0.23	0.270233	0.204267	NA	0.159	NA	9.5948004
693	6	106967185	106967185	A	C	exonic	AIM1	NA	nonsynonymous SNV	AIM1:NM_001624:exon2:c.A878C:p.Q293P	exonic	ENSG00000112297	NA	nonsynonymous SNV	ENSG00000112297:ENST00000369066:exon2:c.A878C:p.Q293P	NA	NA	6q21	NA	NA	Name=4	NA	rs1159148	0.17	0.17	0.153	0.20647	0.2366	0.0536	0.1945	0.1974	0.3538	0.23	0.05	0.2	0.2	0.2424	0.26	0.35	T	0.0	B	0.0	B	0.155	N	1.000	P	-0.69	N	-0.54	T	-1.106	T	0.055	T	0.035	-0.275	2.681	2.58	0.381	1.127	8.426	-0.275346	NA	0.21	0.259535	0.209941	NA	0.239	NA	9.5947984
693	1	24706269	24706269	A	G	exonic	STPG1	NA	synonymous SNV	STPG1:NM_178122:exon4:c.T195C:p.N65N,STPG1:NM_001199012:exon5:c.T336C:p.N112N,STPG1:NM_001199013:exon5:c.T336C:p.N112N,STPG1:NM_001199014:exon6:c.T60C:p.N20N	exonic	ENSG00000001460	NA	synonymous SNV	ENSG00000001460:ENST00000438866:exon1:c.T45C:p.N15N,ENSG00000001460:ENST00000440416:exon3:c.T195C:p.N65N,ENSG00000001460:ENST00000003583:exon4:c.T195C:p.N65N,ENSG00000001460:ENST00000337248:exon5:c.T336C:p.N112N,ENSG00000001460:ENST00000374409:exon5:c.T336C:p.N112N	NA	NA	1p36.11	NA	NA	Name=6	NA	rs1064842	0.43	0.43	0.414	0.419129	0.3618	0.4444	0.5101	0.4894	0.2924	0.38	0.44	0.48	0.49	0.3706	0.5	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-1.122	T	0.000	T	.	-0.667	1.081	-7.34	-1.966	-1.203	18.125	-0.667099	NA	NA	0.341395	0.495234	ID=COSM1340988,COSM1340987;OCCURENCE=1(large_intestine)	0.319	NA	9.5928716
693	17	7329632	7329632	T	G	exonic	C17orf74	NA	nonsynonymous SNV	C17orf74:NM_175734:exon3:c.T322G:p.S108A	exonic	ENSG00000184560	NA	nonsynonymous SNV	ENSG00000184560:ENST00000333870:exon3:c.T322G:p.S108A	NA	NA	17p13.1	NA	NA	NA	NA	rs13290	0.36	0.36	0.299	0.345048	0.5984	0.0427	0.3732	0.2837	0.4591	0.6	0.03	0.42	0.31	0.5045	0.64	0.09	T	0.99	D	0.978	D	0.004	N	0.006	P	1.59	L	1.28	T	-0.956	T	0.000	T	0.086	2.02	12.71	3.18	1.683	0.457	8.133	2.019575	2.019575	NA	0.640199	0.354946	NA	0.37	NA	9.5902344
693	15	66821250	66821250	A	G	exonic	ZWILCH	NA	nonsynonymous SNV	ZWILCH:NM_017975:exon11:c.A1030G:p.S344G	exonic	ENSG00000174442	NA	nonsynonymous SNV	ENSG00000174442:ENST00000535141:exon10:c.A688G:p.S230G,ENSG00000174442:ENST00000565627:exon10:c.A688G:p.S230G,ENSG00000174442:ENST00000307897:exon11:c.A1030G:p.S344G,ENSG00000174442:ENST00000446801:exon11:c.A688G:p.S230G	Score=295;Name=lod=21	NA	15q22.31	NA	NA	NA	NA	rs11071896	0.16	0.16	0.136	0.181709	0.2535	0.1825	0.1585	0.0325	0.3252	0.25	0.13	0.21	0.02	0.2351	0.25	1	T	0.0	B	0.0	B	0.000	N	0.983	P	-2.215	N	1.11	T	-0.976	T	0.000	T	0.008	0.888	8.607	3.19	0.566	4.667	8.938	0.888157	NA	1	0.254827	0.072921	NA	0.21	NA	9.5899064
693	21	46271460	46271460	T	C	UTR3	PTTG1IP	NM_004339:c.*36A>G	NA	NA	exonic	ENSG00000183255	NA	nonsynonymous SNV	ENSG00000183255:ENST00000445724:exon3:c.A251G:p.E84G	NA	NA	21q22.3	NA	Name=USF-1	Name=3	NA	rs2236442	0.07	0.07	0.063	0.0628994	0.0885	0.0625	0.0432	0.0514	0.0665	0.09	0.06	0.05	0.05	0.0788	0.11	0.04	D	0.914	P	0.254	B	.	.	1.000	N	.	.	0.9	T	-1.107	T	0.003	T	0.058	2.012	12.69	0.454	-0.060	-0.542	4.840	2.012203	2.012203	0	0.079884	0.048797	ID=COSM149244;OCCURENCE=1(stomach)	0.167	NA	9.5861494
693	8	76468282	76468282	G	A	exonic	HNF4G	NA	nonsynonymous SNV	HNF4G:NM_004133:exon6:c.G681A:p.M227I	exonic	ENSG00000164749	NA	nonsynonymous SNV	ENSG00000164749:ENST00000396423:exon6:c.G681A:p.M227I,ENSG00000164749:ENST00000354370:exon7:c.G570A:p.M190I	Score=603;Name=lod=377	NA	8q21.11	NA	NA	NA	NA	rs1805098	0.62	0.62	0.641	0.614816	0.5895	0.3919	0.4914	0.9508	0.5041	0.6	0.44	0.5	0.96	0.5803	0.96	0.19	T	0.001	B	0.017	B	0.154	N	0.473	P	0.975	L	-3.95	D	-0.977	T	0.000	T	0.037	1.523	11.04	2.52	0.295	-1.558	4.259	1.523031	1.523031	0.26	0.577674	0.889469	NA	0.551	NA	9.5858594
693	7	76991935	76991935	C	T	exonic	GSAP	NA	nonsynonymous SNV	GSAP:NM_017439:exon13:c.G914A:p.G305E	exonic	ENSG00000186088	NA	nonsynonymous SNV	ENSG00000186088:ENST00000257626:exon13:c.G914A:p.G305E	NA	NA	7q11.23	NA	NA	NA	NA	rs1527263	0.28	0.28	0.276	0.301917	0.2326	0.0883	0.219	0.5454	0.3231	0.24	0.09	0.25	0.59	0.2634	0.59	1	T	0.0	B	0.0	B	0.211	N	1.000	P	-1.1	N	2.43	T	-0.939	T	0.000	T	0.049	-1.816	0.009	4.5	0.999	1.184	5.787	-1.815517	NA	0.75	0.252326	0.496823	ID=COSM1452150;OCCURENCE=1(large_intestine)	0.275	NA	9.5850074
694	15	85383640	85383640	G	A	exonic	ALPK3	NA	nonsynonymous SNV	ALPK3:NM_020778:exon5:c.G1736A:p.G579E	exonic	ENSG00000136383	NA	nonsynonymous SNV	ENSG00000136383:ENST00000258888:exon5:c.G1736A:p.G579E	NA	NA	15q25.3	Score=945;Name=V$USF_C	NA	NA	NA	rs3803405	0.16	0.16	0.147	0.137979	0.2575	0.1329	0.1643	0.0159	0.1667	0.26	0.14	0.2	0.01	0.222	0.27	0.14	T	0.197	B	0.092	B	0.382	N	1.000	P	0.975	L	0.31	T	-1.053	T	0.000	T	0.218	2.831	15.43	2.68	1.163	0.123	6.531	2.831448	2.831448	0	0.270126	0.055202	NA	0.239	NA	9.5837074
694	21	44480616	44480616	G	A	exonic	CBS	NA	synonymous SNV	CBS:NM_000071:exon12:c.C1080T:p.A360A,CBS:NM_001178008:exon12:c.C1080T:p.A360A,CBS:NM_001178009:exon12:c.C1080T:p.A360A	exonic	ENSG00000160200	NA	synonymous SNV	ENSG00000160200:ENST00000544202:exon10:c.C816T:p.A272A,ENSG00000160200:ENST00000352178:exon12:c.C1080T:p.A360A,ENSG00000160200:ENST00000359624:exon12:c.C1080T:p.A360A,ENSG00000160200:ENST00000398158:exon12:c.C1080T:p.A360A,ENSG00000160200:ENST00000398165:exon12:c.C1080T:p.A360A,ENSG00000160200:ENST00000398168:exon12:c.C1080T:p.A360A	NA	NA	21q22.3	NA	Name=Pol2-4H8,Pol2	NA	NA	rs1801181	0.33	0.33	0.313	0.295527	0.3857	0.5744	0.1888	0.0204	0.363	0.39	0.58	0.21	0.03	0.3382	0.58	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.995	T	0.000	T	.	-0.52	1.626	-10.1	-2.547	-2.619	3.956	-0.520158	NA	NA	0.359204	0.074444	NA	0.246	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000078107.1|RCV000124155.1;CLNDSDB=.|.;CLNDSDBID=.|.	9.5835626
694	6	31124849	31124849	C	T	exonic	CCHCR1	NA	stopgain	CCHCR1:NM_001105563:exon2:c.G234A:p.W78X,CCHCR1:NM_001105564:exon2:c.G234A:p.W78X	exonic	ENSG00000204536	NA	stopgain	ENSG00000204536:ENST00000396268:exon2:c.G234A:p.W78X,ENSG00000204536:ENST00000426967:exon2:c.G261A:p.W87X,ENSG00000204536:ENST00000451521:exon2:c.G234A:p.W78X	Score=340;Name=lod=32	NA	6p21.33	NA	NA	NA	NA	rs3130453	0.46	0.46	0.432	0.469249	0.4612	0.3968	0.5202	0.4977	0.4775	0.47	0.35	0.52	0.5	0.4756	0.52	0.45	T	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	6.046	37	3.71	1.298	0.244	6.222	6.045963	6.045963	NA	0.481728	0.49106	NA	0.478	NA	9.581472
695	1	85666156	85666156	T	G	exonic	SYDE2	NA	nonsynonymous SNV	SYDE2:NM_032184:exon1:c.A524C:p.Q175P	exonic	ENSG00000097096	NA	nonsynonymous SNV	ENSG00000097096:ENST00000341460:exon1:c.A524C:p.Q175P	NA	NA	1p22.3	NA	NA	Name=46	NA	rs12121540	0.3	0.3	0.246	0.304513	0.2376	0.4683	0.379	0.1543	0.3548	0.22	0.49	0.36	0.17	0.2861	0.49	0.71	T	0.0	B	0.001	B	0.261	N	1.000	P	0.11	N	3.32	T	-0.928	T	0.002	T	0.033	-0.323	2.467	-9.1	-1.318	-0.785	1.917	-0.322733	NA	0.5	0.238354	0.162358	NA	0.181	NA	9.5712794
695	19	2223327	2223327	G	A	exonic	DOT1L	NA	synonymous SNV	DOT1L:NM_032482:exon25:c.G3438A:p.P1146P	exonic	ENSG00000104885	NA	synonymous SNV	ENSG00000104885:ENST00000457590:exon2:c.G78A:p.P26P,ENSG00000104885:ENST00000398665:exon25:c.G3438A:p.P1146P	NA	NA	19p13.3	Score=799;Name=V$OLF1_01	NA	NA	NA	rs2286329	0.1	0.1	0.074	0.124002	0.0189	0.122	0.0692	0.2337	0.1247	0.02	0.15	0.08	0.2	0.0601	0.2	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.117	T	0.000	T	.	-0.427	2.013	-10.0	-4.716	-3.325	5.132	-0.426659	NA	NA	0.016735	0.201593	NA	0.087	NA	9.5709316
695	1	9323910	9323910	G	A	exonic	H6PD	NA	nonsynonymous SNV	H6PD:NM_004285:exon5:c.G1358A:p.R453Q	exonic	ENSG00000049239	NA	nonsynonymous SNV	ENSG00000049239:ENST00000377403:exon5:c.G1358A:p.R453Q,ENSG00000049239:ENST00000602477:exon5:c.G1391A:p.R464Q	NA	NA	1p36.22	NA	NA	NA	NA	rs6688832	0.36	0.36	0.347	0.389577	0.2485	0.4812	0.3732	0.4932	0.3119	0.25	0.45	0.34	0.46	0.2851	0.46	0.49	T	0.001	B	0.001	B	0.301	N	1.000	P	0.69	N	-4.83	D	-0.989	T	0.000	T	0.09	-1.189	0.078	-2.12	-0.530	-0.091	4.519	-1.18893	NA	NA	0.229186	0.457785	NA	0.348	CLINSIG=unknown;CLNDBN=Deficiency_of_(R)-20-hydroxysteroid_dehydrogenase;CLNREVSTAT=single;CLNACC=RCV000017511.1;CLNDSDB=MedGen:OMIM:Orphanet:SNOMED_CT;CLNDSDBID=C1291245:604931:ORPHA168588:124138004	9.5705474
695	3	12858028	12858028	T	C	exonic	CAND2	NA	nonsynonymous SNV	CAND2:NM_012298:exon8:c.T1318C:p.S440P,CAND2:NM_001162499:exon10:c.T1597C:p.S533P	exonic	ENSG00000144712	NA	nonsynonymous SNV	ENSG00000144712:ENST00000295989:exon8:c.T1318C:p.S440P,ENSG00000144712:ENST00000456430:exon10:c.T1597C:p.S533P	Score=523;Name=lod=178	NA	3p25.2	Score=865;Name=V$AP1_01	NA	NA	NA	rs3732675	0.61	0.61	0.643	0.604034	0.6243	0.4365	0.4914	0.9584	0.3569	0.61	0.4	0.48	0.95	0.5541	0.95	1	T	0.0	B	0.0	B	0.001	N	0.000	P	-1.025	N	-0.06	T	-0.947	T	0.000	T	0.061	-0.479	1.795	4.25	0.577	1.701	7.327	-0.478506	NA	1	0.586605	0.889423	ID=COSM1484577,COSM445535;OCCURENCE=1(breast)	0.674	NA	9.5683284
695	1	115168600	115168600	A	T	exonic	DENND2C	NA	nonsynonymous SNV	DENND2C:NM_198459:exon2:c.T6A:p.D2E,DENND2C:NM_001256404:exon4:c.T6A:p.D2E	exonic	ENSG00000175984	NA	nonsynonymous SNV	ENSG00000175984:ENST00000393276:exon2:c.T6A:p.D2E,ENSG00000175984:ENST00000393277:exon2:c.T6A:p.D2E,ENSG00000175984:ENST00000393274:exon4:c.T6A:p.D2E	Score=617;Name=lod=428	NA	1p13.2	NA	NA	NA	NA	rs7541738	0.13	0.13	0.128	0.114217	0.2863	0.002	0.1441	0.0182	0.1616	0.29	NA	0.18	0.02	0.2032	0.29	0.18	T	0.084	B	0.024	B	0.024	N	0.390	P	1.355	L	3.61	T	-0.982	T	0.008	T	0.095	2.013	12.69	4.54	2.187	0.645	1.817	2.012818	2.012818	0.2	0.275994	0.061507	NA	0.167	NA	9.5678394
695	9	117266965	117266965	C	T	exonic	DFNB31	NA	synonymous SNV	DFNB31:NM_001173425:exon1:c.G117A:p.V39V,DFNB31:NM_015404:exon1:c.G117A:p.V39V	exonic	ENSG00000095397	NA	synonymous SNV	ENSG00000095397:ENST00000362057:exon1:c.G117A:p.V39V,ENSG00000095397:ENST00000374057:exon1:c.G117A:p.V39V	Score=629;Name=lod=478	NA	9q32	Score=926;Name=V$MYB_Q6	Name=Sin3Ak-20,Pol2,E2F6,E2F6_(H-50)	Name=94	NA	rs2297815	0.27	0.27	0.272	0.255591	0.4016	0.1389	0.3256	0.2231	0.2198	0.41	0.15	0.32	0.17	0.3339	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.619851	1.619851	NA	0.365246	0.239645	NA	0.022	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000038862.2;CLNDSDB=.;CLNDSDBID=.	9.5659206
696	5	40955561	40955561	G	C	exonic	C7	NA	nonsynonymous SNV	C7:NM_000587:exon10:c.G1166C:p.S389T	exonic	ENSG00000112936	NA	nonsynonymous SNV	ENSG00000112936:ENST00000313164:exon10:c.G1166C:p.S389T	NA	NA	5p13.1	NA	NA	Name=10	NA	rs1063499	0.51	0.51	0.472	0.48123	0.5855	0.5218	0.5317	0.3048	0.5348	0.6	0.53	0.55	0.33	0.57	0.61	0.12	T	0.939	P	0.666	P	0.047	N	1.000	P	2.545	M	-0.1	T	-0.903	T	0.000	T	0.111	2.712	15.03	1.41	0.031	1.379	7.182	2.712446	2.712446	0.03	0.613185	0.344918	NA	0.543	NA	9.5646484
696	4	38879949	38879949	G	A	exonic	FAM114A1	NA	nonsynonymous SNV	FAM114A1:NM_138389:exon3:c.G250A:p.G84R	exonic	ENSG00000197712	NA	nonsynonymous SNV	ENSG00000197712:ENST00000510213:exon2:c.G250A:p.G84R,ENSG00000197712:ENST00000358869:exon3:c.G250A:p.G84R	Score=243;Name=lod=13	NA	4p14	NA	NA	NA	NA	rs11096964	0.23	0.23	0.221	0.203275	0.2475	0.0863	0.2061	0.3192	0.1196	0.27	0.08	0.22	0.35	0.248	0.35	0.36	T	0.09	B	0.018	B	0.002	N	0.073	P	1.955	M	2.9	T	-0.941	T	0.000	T	0.221	2.644	14.8	1.88	0.255	1.477	5.853	2.643511	2.643511	0.02	0.273488	0.312528	NA	0.159	NA	9.5643454
696	1	29631909	29631909	A	G	exonic	PTPRU	NA	nonsynonymous SNV	PTPRU:NM_001195001:exon18:c.A2789G:p.N930S,PTPRU:NM_133177:exon18:c.A2789G:p.N930S,PTPRU:NM_133178:exon18:c.A2789G:p.N930S,PTPRU:NM_005704:exon19:c.A2819G:p.N940S	exonic	ENSG00000060656	NA	nonsynonymous SNV	ENSG00000060656:ENST00000323874:exon18:c.A2789G:p.N930S,ENSG00000060656:ENST00000356870:exon18:c.A2789G:p.N930S,ENSG00000060656:ENST00000373779:exon18:c.A2789G:p.N930S,ENSG00000060656:ENST00000428026:exon18:c.A2789G:p.N930S,ENSG00000060656:ENST00000460170:exon18:c.A2789G:p.N930S,ENSG00000060656:ENST00000345512:exon19:c.A2819G:p.N940S	Score=578;Name=lod=298	NA	1p35.3	NA	NA	NA	NA	rs2235937	0.31	0.31	0.287	0.336462	0.2425	0.4851	0.3775	0.2209	0.407	0.23	0.48	0.31	0.22	0.2945	0.48	.	.	0.0	B	0.001	B	0.001	D	0.904	P	0.015	N	1.62	T	-0.902	T	0.000	T	0.078	-0.431	1.995	1.77	0.386	2.492	6.934	-0.43079	NA	0.56	0.232791	0.225374	ID=COSM146456;OCCURENCE=1(stomach)	0.181	NA	9.5635424
696	11	57381989	57381989	G	A	exonic	SERPING1	NA	nonsynonymous SNV	SERPING1:NM_001032295:exon7:c.G1438A:p.V480M,SERPING1:NM_000062:exon8:c.G1438A:p.V480M	exonic	ENSG00000149131	NA	nonsynonymous SNV	ENSG00000149131:ENST00000378324:exon7:c.G1282A:p.V428M,ENSG00000149131:ENST00000403558:exon7:c.G1567A:p.V523M,ENSG00000149131:ENST00000278407:exon8:c.G1438A:p.V480M,ENSG00000149131:ENST00000340687:exon8:c.G1327A:p.V443M,ENSG00000149131:ENST00000378323:exon8:c.G1453A:p.V485M	Score=512;Name=lod=160	NA	11q12.1	NA	NA	NA	NA	rs4926	0.17	0.17	0.174	0.149561	0.2664	0.0942	0.1657	0.0855	0.1616	0.26	0.11	0.19	0.09	0.2231	0.28	0.07	T	0.048	B	0.034	B	0.026	N	1.000	P	1.425	L	-1.94	D	-0.970	T	0.000	T	0.221	1.571	11.21	-0.867	-0.365	-1.524	20.931	1.570632	1.570632	0.02	0.280843	0.106315	NA	0.08	NA	9.5629904
696	4	38880046	38880046	T	C	exonic	FAM114A1	NA	nonsynonymous SNV	FAM114A1:NM_138389:exon3:c.T347C:p.L116P	exonic	ENSG00000197712	NA	nonsynonymous SNV	ENSG00000197712:ENST00000510213:exon2:c.T347C:p.L116P,ENSG00000197712:ENST00000358869:exon3:c.T347C:p.L116P	NA	NA	4p14	NA	NA	NA	NA	rs11555334	0.23	0.23	0.214	0.202875	0.2475	0.0863	0.2061	0.3192	0.1176	0.27	0.08	0.22	0.35	0.2547	0.35	0.31	T	0.0	B	0.0	B	0.570	N	0.000	P	-1.085	N	2.96	T	-0.931	T	0.000	T	0.337	-0.655	1.123	-9.46	-2.805	-2.405	7.574	-0.654738	NA	0.33	0.26829	0.308797	NA	0.181	NA	9.5628434
696	5	35874575	35874575	C	T	exonic	IL7R	NA	nonsynonymous SNV	IL7R:NM_002185:exon6:c.C731T:p.T244I	exonic	ENSG00000168685	NA	nonsynonymous SNV	ENSG00000168685:ENST00000303115:exon6:c.C731T:p.T244I	NA	Name=Type 1 diabetes,Multiple sclerosis	5p13.2	NA	NA	NA	NA	rs6897932	0.19	0.19	0.162	0.172524	0.2714	0.1687	0.183	0.0658	0.2117	0.28	0.18	0.2	0.07	0.2327	0.28	0.87	T	0.0	B	0.001	B	0.188	N	1.000	P	0.605	N	-3.91	D	-0.806	T	0.000	T	0.073	0.602	7.247	-2.49	-0.378	-0.450	7.369	0.602421	NA	0.78	0.267442	0.10985	ID=COSM132904;OCCURENCE=1(stomach),1(haematopoietic_and_lymphoid_tissue)	0.21	NA	9.5617914
696	11	72408055	72408055	G	C	exonic	ARAP1	NA	nonsynonymous SNV	ARAP1:NM_001135190:exon19:c.C2221G:p.Q741E,ARAP1:NM_015242:exon20:c.C2404G:p.Q802E,ARAP1:NM_001040118:exon22:c.C3139G:p.Q1047E	exonic	ENSG00000186635	NA	nonsynonymous SNV	ENSG00000186635:ENST00000393605:exon17:c.C2419G:p.Q807E,ENSG00000186635:ENST00000429686:exon19:c.C2221G:p.Q741E,ENSG00000186635:ENST00000334211:exon20:c.C2404G:p.Q802E,ENSG00000186635:ENST00000426523:exon20:c.C2404G:p.Q802E,ENSG00000186635:ENST00000455638:exon20:c.C3139G:p.Q1047E,ENSG00000186635:ENST00000359373:exon22:c.C3139G:p.Q1047E,ENSG00000186635:ENST00000393609:exon22:c.C3139G:p.Q1047E	NA	NA	11q13.4	NA	NA	NA	NA	rs56200889	0.23	0.23	0.203	0.249201	0.2624	0.2431	0.2147	0.2194	0.3067	0.27	0.23	0.2	0.19	0.2606	0.27	0.02	D	0.052	B	0.115	B	0.005	N	1.000	P	1.23	L	2.19	T	-1.015	T	0.000	T	0.264	2.158	13.17	4.43	2.501	0.552	9.477	2.158091	2.158091	0.08	0.248893	0.209472	ID=COSM429808,COSM429807;OCCURENCE=1(breast)	0.152	NA	9.5614404
696	9	37489378	37489378	C	T	exonic	POLR1E	NA	synonymous SNV	POLR1E:NM_022490:exon4:c.C324T:p.N108N	exonic	ENSG00000137054	NA	nonsynonymous SNV	ENSG00000137054:ENST00000442009:exon4:c.C20T:p.T7I	Score=519;Name=lod=171	NA	9p13.2	NA	NA	NA	NA	rs11542231	0.07	0.07	0.06	0.0656949	0.1571	0.002	0.0965	0.0053	0.0971	0.15	0.0017	0.12	0.01	0.1208	0.16	0.23	T	0.002	B	0.003	B	.	.	0.000	P	.	.	1.96	T	-1.039	T	0.000	T	.	3.612	18.38	4.37	1.236	0.633	6.019	3.611716	3.611716	0	0.162093	0.032456	NA	0.123	NA	9.560007
696	19	9059307	9059307	C	T	exonic	MUC16	NA	nonsynonymous SNV	MUC16:NM_024690:exon3:c.G28139A:p.G9380D	exonic	ENSG00000181143	NA	nonsynonymous SNV	ENSG00000181143:ENST00000397910:exon3:c.G28139A:p.G9380D	NA	NA	19p13.2	NA	NA	NA	NA	rs12461695	0.15	0.15	0.133	0.145966	0.0865	0.2669	0.1787	0.0855	0.1411	0.09	0.3	0.15	0.08	0.1126	0.3	0	D	0.502	P	0.273	B	.	.	.	.	0.975	L	1.85	T	-0.950	T	0.000	T	0.136	0.039	4.216	0.092	0.046	-2.733	3.638	0.038924	NA	0.22	0.07683	0.095873	NA	0.145	NA	9.5574034
696	4	2744087	2744087	G	A	exonic	TNIP2	NA	nonsynonymous SNV	TNIP2:NM_001161527:exon6:c.C866T:p.A289V,TNIP2:NM_024309:exon6:c.C1187T:p.A396V	exonic	ENSG00000168884	NA	nonsynonymous SNV	ENSG00000168884:ENST00000503235:exon5:c.C938T:p.A313V,ENSG00000168884:ENST00000315423:exon6:c.C1187T:p.A396V,ENSG00000168884:ENST00000510267:exon6:c.C866T:p.A289V	NA	NA	4p16.3	Score=878;Name=V$CP2_01	NA	Name=2	NA	rs2269495	0.36	0.36	0.33	0.342851	0.4165	0.3879	0.5663	0.0651	0.4376	0.44	0.41	0.52	0.09	0.4335	0.52	0.06	T	0.617	P	0.173	B	0.943	N	1.000	P	2.015	M	1.12	T	-0.926	T	0.000	T	0.048	3.521	17.98	1.99	0.536	0.476	12.816	3.520625	3.520625	0.09	0.427209	0.142533	ID=COSM447768;OCCURENCE=1(breast)	0.399	NA	9.5561244
697	5	22078584	22078584	C	T	exonic	CDH12	NA	nonsynonymous SNV	CDH12:NM_004061:exon5:c.G202A:p.V68M	exonic	ENSG00000154162	NA	nonsynonymous SNV	ENSG00000154162:ENST00000522262:exon3:c.G202A:p.V68M,ENSG00000154162:ENST00000504376:exon4:c.G202A:p.V68M,ENSG00000154162:ENST00000382254:exon5:c.G202A:p.V68M	Score=662;Name=lod=656	NA	5p14.3	NA	NA	NA	NA	rs4371716	0.32	0.32	0.374	0.36222	0.2396	0.1438	0.2824	0.6755	0.3466	0.24	0.15	0.27	0.69	0.2988	0.69	0.36	T	0.0	B	0.001	B	0.000	N	1.000	P	-1.115	N	9.26	T	-1.103	T	0.000	T	0.114	2.566	14.54	5.5	0.931	5.801	11.527	2.565803	2.565803	0.31	0.240465	0.620064	NA	0.391	NA	9.5544684
697	8	18257854	18257854	T	C	exonic	NAT2	NA	nonsynonymous SNV	NAT2:NM_000015:exon2:c.T341C:p.I114T	exonic	ENSG00000156006	NA	nonsynonymous SNV	ENSG00000156006:ENST00000286479:exon2:c.T341C:p.I114T	Score=243;Name=lod=13	NA	8p22	NA	NA	NA	NA	rs1801280	0.3	0.3	0.261	0.292732	0.4493	0.0377	0.3617	0.292	0.3466	0.45	0.03	0.38	0.31	0.3846	0.45	0.06	T	0.37	B	0.5	P	0.009	N	0.922	P	1.61	L	4.26	T	-0.928	T	0.000	T	0.257	0.992	9.05	0.537	0.102	3.744	4.753	0.99186	NA	0.08	0.445465	0.297549	NA	0.29	CLINSIG=drug-response;CLNDBN=Slow_acetylator_due_to_N-acetyltransferase_enzyme_variant;CLNREVSTAT=single;CLNACC=RCV000000759.1;CLNDSDB=MedGen:OMIM:SNOMED_CT;CLNDSDBID=C1827377:243400:425079005	9.5539684
697	14	38061742	38061742	C	T	exonic	FOXA1	NA	nonsynonymous SNV	FOXA1:NM_004496:exon2:c.G247A:p.A83T	exonic	ENSG00000129514	NA	nonsynonymous SNV	ENSG00000129514:ENST00000250448:exon2:c.G247A:p.A83T,ENSG00000129514:ENST00000540786:exon2:c.G148A:p.A50T	Score=313;Name=lod=25	NA	14q21.1	NA	Name=Pol2	NA	NA	rs7144658	0.63	0.63	0.601	0.583067	0.5825	0.8442	0.6614	0.3714	0.545	0.59	0.87	0.64	0.4	0.6084	0.87	0.54	T	0.009	B	0.013	B	0.068	N	0.021	P	0.9	L	2.36	T	-1.032	T	0.000	T	0.011	2.77	15.22	2.96	0.784	1.052	5.555	2.770271	2.770271	0.02	0.589446	0.441163	NA	0.464	NA	9.5529874
697	15	89417238	89417238	A	G	exonic	ACAN	NA	nonsynonymous SNV	ACAN:NM_013227:exon17:c.A7499G:p.Q2500R	exonic	ENSG00000157766	NA	nonsynonymous SNV	ENSG00000157766:ENST00000559004:exon16:c.A7385G:p.Q2462R,ENSG00000157766:ENST00000561243:exon16:c.A7499G:p.Q2500R,ENSG00000157766:ENST00000439576:exon17:c.A7499G:p.Q2500R	Score=599;Name=lod=361	NA	15q26.1	NA	NA	NA	NA	rs1126823	0.36	0.36	0.366	0.406749	0.2366	0.2639	0.2939	0.7557	0.3374	0.22	0.25	0.32	0.72	0.2928	0.72	1	T	0.001	B	0.001	B	0.011	N	0.000	P	.	.	-0.14	T	-0.938	T	0.000	T	0.252	-0.064	3.69	2.92	0.591	1.990	11.127	-0.063804	NA	1	0.251057	0.678901	NA	0.464	NA	9.5528764
697	6	30314567	30314567	C	A	exonic	RPP21,TRIM39-RPP21	NA	nonsynonymous SNV	RPP21:NM_001199120:exon5:c.C469A:p.Q157K,RPP21:NM_024839:exon5:c.C445A:p.Q149K,TRIM39-RPP21:NM_001199119:exon10:c.C1492A:p.Q498K	exonic	ENSG00000241370,ENSG00000248167	NA	nonsynonymous SNV	ENSG00000241370:ENST00000428040:exon4:c.C514A:p.Q172K,ENSG00000241370:ENST00000433076:exon5:c.C469A:p.Q157K,ENSG00000241370:ENST00000442966:exon5:c.C445A:p.Q149K,ENSG00000248167:ENST00000513556:exon10:c.C1228A:p.Q410K	NA	NA	6p22.1	NA	NA	NA	NA	rs974963	0.32	0.32	0.291	0.372604	0.2435	0.505	0.4496	0.3018	0.41	0.21	0.45	0.37	0.29	0.2973	0.45	0	D	0.003	B	0.006	B	0.106	N	1.000	P	0.55	N	1.52	T	-1.082	T	0.034	T	0.081	1.21	9.914	3.1	0.743	1.778	11.662	1.210278	NA	0.37	0.241602	0.277631	NA	NA	NA	9.5509314
697	3	39307256	39307256	C	T	exonic	CX3CR1	NA	nonsynonymous SNV	CX3CR1:NM_001171171:exon2:c.G745A:p.V249I,CX3CR1:NM_001171172:exon2:c.G745A:p.V249I,CX3CR1:NM_001171174:exon2:c.G841A:p.V281I,CX3CR1:NM_001337:exon2:c.G745A:p.V249I	exonic	ENSG00000168329	NA	nonsynonymous SNV	ENSG00000168329:ENST00000358309:exon2:c.G841A:p.V281I,ENSG00000168329:ENST00000399220:exon2:c.G745A:p.V249I,ENSG00000168329:ENST00000541347:exon2:c.G745A:p.V249I,ENSG00000168329:ENST00000542107:exon2:c.G745A:p.V249I	NA	NA	3p22.2	NA	NA	NA	NA	rs3732379	0.17	0.17	0.153	0.144369	0.2853	0.0278	0.2378	0.0893	0.1278	0.28	0.03	0.26	0.11	0.2209	0.28	1	T	0.033	B	0.018	B	0.074	N	1.000	P	0.035	N	-0.4	T	-1.059	T	0.000	T	0.1	-1.864	0.008	-2.32	-0.555	-1.393	12.312	-1.863526	NA	0.85	0.276284	0.133975	NA	0.203	CLINSIG=other|pathogenic|other|other;CLNDBN=Human_immunodeficiency_virus_type_1\x2c_rapid_progression_to_AIDS|Coronary_artery_disease\x2c_resistance_to|Age-related_macular_degeneration_12|MACULAR_DEGENERATION\x2c_AGE-RELATED\x2c_12\x2c_SUSCEPTIBILITY_TO;CLNREVSTAT=single|single|single|single;CLNACC=RCV000008629.3|RCV000008630.3|RCV000022393.1|RCV000023109.3;CLNDSDB=.|.|MedGen:OMIM|.;CLNDSDBID=.|.|C3151079:613784|.	9.5508494
697	5	5146395	5146395	A	G	exonic	ADAMTS16	NA	nonsynonymous SNV	ADAMTS16:NM_139056:exon3:c.A328G:p.M110V	exonic	ENSG00000145536	NA	nonsynonymous SNV	ENSG00000145536:ENST00000274181:exon3:c.A328G:p.M110V,ENSG00000145536:ENST00000511368:exon3:c.A328G:p.M110V	NA	NA	5p15.32	NA	Name=Pol2-4H8	NA	NA	rs1863968	0.46	0.46	0.468	0.482827	0.6133	0.4286	0.4035	0.3525	0.637	0.6	0.4	0.46	0.34	0.5537	0.62	0.02	D	0.005	B	0.004	B	0.022	N	0.999	P	1.4	L	3.48	T	-0.902	T	0.000	T	0.062	1.049	9.286	-11.5	-2.247	-1.137	8.248	1.049358	NA	0.07	0.617576	0.414824	NA	0.428	NA	9.5487574
697	16	57071113	57071113	T	C	exonic	NLRC5	NA	synonymous SNV	NLRC5:NM_032206:exon14:c.T2718C:p.S906S	exonic	ENSG00000140853	NA	synonymous SNV	ENSG00000140853:ENST00000538453:exon3:c.T171C:p.S57S,ENSG00000140853:ENST00000543030:exon8:c.T615C:p.S205S,ENSG00000140853:ENST00000538110:exon10:c.T1239C:p.S413S,ENSG00000140853:ENST00000539144:exon13:c.T2718C:p.S906S,ENSG00000140853:ENST00000262510:exon15:c.T2718C:p.S906S,ENSG00000140853:ENST00000308149:exon15:c.T2718C:p.S906S,ENSG00000140853:ENST00000436936:exon15:c.T2718C:p.S906S	Score=352;Name=lod=36	NA	16q13	NA	NA	Name=9	NA	rs1684579	0.5	0.5	0.613	0.576278	0.7455	0.3958	0.6081	0.6135	0.5153	0.6	0.37	0.57	0.45	0.6585	0.71	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	-0.547	1.52	-4.08	-1.299	-2.080	14.812	-0.547262	NA	NA	0.713953	0.634213	ID=COSM148084;OCCURENCE=1(stomach)	NA	NA	9.5487136
697	17	15496730	15496730	A	G	exonic	CDRT1	NA	nonsynonymous SNV	CDRT1:NM_006382:exon11:c.T1927C:p.F643L	exonic	ENSG00000241322	NA	nonsynonymous SNV	ENSG00000241322:ENST00000354433:exon4:c.T427C:p.F143L,ENSG00000241322:ENST00000395906:exon11:c.T1927C:p.F643L	Score=625;Name=lod=464	NA	17p12	NA	NA	NA	NA	rs8078150	0.34	0.34	0.307	0.360623	0.2346	0.3819	0.33	0.4675	0.3456	0.25	0.37	0.31	0.46	0.2966	0.46	.	.	0.0	B	0.0	B	.	.	0.000	P	-1.845	N	2.3	T	-0.939	T	0.000	T	0.09	0.007	4.048	2.47	0.301	2.533	4.283	0.006554	NA	1	0.254302	0.447571	NA	0.377	NA	9.5478314
697	12	92818482	92818482	C	T	exonic	CLLU1	NA	nonsynonymous SNV	CLLU1:NM_001025233:exon1:c.C26T:p.S9F	exonic	ENSG00000257127	NA	nonsynonymous SNV	ENSG00000257127:ENST00000378485:exon1:c.C26T:p.S9F	NA	NA	12q22	NA	Name=STAT3,c-Fos	Name=88	NA	rs12580153	0.19	0.19	0.158	0.163738	0.2793	0.1379	0.1787	0.0658	0.1933	0.27	0.15	0.2	0.09	0.2388	0.27	0	D	.	.	.	.	.	.	1.000	P	0	N	0.72	T	-1.004	T	0.000	T	0.053	-0.392	2.161	0.23	0.039	-0.423	2.744	-0.392163	NA	NA	0.268308	0.089139	NA	0.109	NA	9.5469254
697	20	31688241	31688241	T	C	exonic	BPIFB4	NA	nonsynonymous SNV	BPIFB4:NM_182519:exon12:c.T1579C:p.F527L	exonic	ENSG00000186191	NA	nonsynonymous SNV	ENSG00000186191:ENST00000375483:exon12:c.T1579C:p.F527L	Score=333;Name=lod=30	NA	20q11.21	NA	NA	NA	NA	rs11699009	0.51	0.51	0.525	0.515775	0.6054	0.247	0.5288	0.6755	0.4755	0.6	0.24	0.55	0.67	0.5666	0.68	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-1.7	N	3.2	T	-0.988	T	0.000	T	0.103	-0.758	0.793	5.77	1.476	1.524	11.036	-0.75831	NA	1	0.614651	0.67635	ID=COSM1685483;OCCURENCE=1(skin)	0.522	NA	9.5466824
697	20	10030188	10030188	T	A	exonic	ANKEF1	NA	nonsynonymous SNV	ANKEF1:NM_198798:exon6:c.T971A:p.L324Q,ANKEF1:NM_022096:exon7:c.T971A:p.L324Q	exonic	ENSG00000132623	NA	nonsynonymous SNV	ENSG00000132623:ENST00000378380:exon6:c.T971A:p.L324Q,ENSG00000132623:ENST00000378392:exon7:c.T971A:p.L324Q	NA	NA	20p12.2	NA	NA	Name=2	NA	rs652633	0.18	0.18	0.189	0.197684	0.2744	0.0069	0.1571	0.2685	0.2485	0.27	0.01	0.18	0.24	0.2316	0.28	0.29	T	0.003	B	0.005	B	0.203	N	1.000	P	1.155	L	-0.32	T	-1.070	T	0.000	T	0.219	-0.067	3.673	3.19	1.044	-0.618	3.429	-0.067203	NA	0.07	0.281047	0.256015	NA	0.196	NA	9.5462864
698	19	49339098	49339098	T	C	exonic	HSD17B14	NA	nonsynonymous SNV	HSD17B14:NM_016246:exon2:c.A91G:p.N31D	exonic	ENSG00000087076	NA	nonsynonymous SNV	ENSG00000087076:ENST00000263278:exon2:c.A91G:p.N31D,ENSG00000087076:ENST00000599157:exon2:c.A91G:p.N31D	NA	NA	19q13.33	Score=836;Name=V$GR_Q6	Name=c-Myc,ZBTB7A_(SC-34508),ZEB1_(SC-25388),NFKB,PAX5-C20,CTCF_(C-20),USF-1,TCF12,JunD,RFX5_(N-494),CTCF_(SC-5916),NANOG_(SC-33759),Pol2-4H8,ZNF263,Max,ELF1_(SC-631),Rad21,Oct-2,CTCF,RXRA,GTF2F1_(RAP-74),Znf143_(16618-1-AP),CTCFL_(SC-98982),POU2F2,GABP,USF2,ATF3,PU.1,Pol2,SMC3_(ab9263),BCLAF1_(M33-P5B11),YY1_(C-20),IRF4_(M-17),eGFP-JunD	Name=146	NA	rs8110220	0.3	0.3	0.307	0.34385	0.2674	0.0893	0.2867	0.6165	0.3569	0.26	0.12	0.32	0.58	0.274	0.58	0.41	T	0.0	B	0.0	B	0.755	N	1.000	P	-0.335	N	2.03	T	-0.950	T	0.000	T	0.038	-1.452	0.019	-1.77	-0.518	-0.043	4.057	-1.451578	NA	0.55	0.247267	0.539719	NA	0.428	NA	9.5446664
698	2	54482964	54482964	C	T	exonic	TSPYL6	NA	nonsynonymous SNV	TSPYL6:NM_001003937:exon1:c.G325A:p.G109S	exonic	ENSG00000178021	NA	nonsynonymous SNV	ENSG00000178021:ENST00000317802:exon1:c.G325A:p.G109S	NA	NA	2p16.2	NA	NA	NA	NA	rs843704	0.24	0.24	0.209	0.270168	0.2624	0.2966	0.1902	0.2171	0.3793	0.27	0.24	0.2	0.22	0.272	0.27	0.43	T	0.065	B	0.007	B	.	.	1.000	P	0.97	L	2.16	T	-0.936	T	0.000	T	0.007	0.19	5.023	-2.31	-1.916	-0.965	2.536	0.189912	NA	NA	0.255842	0.220117	ID=COSM148855;OCCURENCE=1(stomach)	0.254	NA	9.5430914
698	8	22021037	22021037	C	A	exonic	SFTPC	NA	nonsynonymous SNV	SFTPC:NM_001172357:exon4:c.C413A:p.T138N,SFTPC:NM_001172410:exon4:c.C413A:p.T138N,SFTPC:NM_003018:exon4:c.C413A:p.T138N	exonic	ENSG00000168484	NA	nonsynonymous SNV	ENSG00000168484:ENST00000520605:exon3:c.C254A:p.T85N,ENSG00000168484:ENST00000523296:exon3:c.C254A:p.T85N,ENSG00000168484:ENST00000524255:exon3:c.C254A:p.T85N,ENSG00000168484:ENST00000318561:exon4:c.C413A:p.T138N,ENSG00000168484:ENST00000437090:exon4:c.C413A:p.T138N,ENSG00000168484:ENST00000521315:exon4:c.C413A:p.T138N,ENSG00000168484:ENST00000522109:exon4:c.C413A:p.T138N	Score=448;Name=lod=88	NA	8p21.3	NA	NA	NA	NA	rs4715	0.21	0.21	0.173	0.197484	0.2644	0.2688	0.2507	0.0318	0.2413	0.27	0.26	0.26	0.04	0.2523	0.27	0.09	T	0.949	P	0.761	P	0.148	N	1.000	P	.	.	-1.3	T	-1.143	T	0.000	T	0.147	3.74	18.99	2.47	0.200	0.920	7.539	3.740275	3.740275	0.07	0.27447	0.062081	NA	0.246	NA	9.5421634
698	16	68057096	68057096	T	C	exonic	DDX28	NA	nonsynonymous SNV	DDX28:NM_018380:exon1:c.A10G:p.T4A	exonic	ENSG00000182810	NA	nonsynonymous SNV	ENSG00000182810:ENST00000332395:exon1:c.A10G:p.T4A	NA	NA	16q22.1	NA	Name=Max,GR,FOXA1_(SC-101058),ELF1_(SC-631),FOXA2_(SC-6554),HNF4G_(SC-6558),Oct-2,p300,RXRA,CEBPB,GTF2F1_(RAP-74),TAF1,MafK_(SC-477),POU2F2,ZBTB33,Pol2,ATF3,Mxi1_(bHLH),SP1,NRSF,Pol2(phosphoS2),TCF4,MEF2C_(SC-13268),HNF4A,YY1_(C-20),BRCA1_(C-1863),TAF7_(SQ-8),eGFP-JunD,IRF4_(M-17),TR4,USF1_(SC-8983),CCNT2,c-Myc,HEY1,NFKB,PAX5-C20,SRF,GRp20,SIX5,USF-1,TBP,Pol2(b),JunD,FOXA1_(C-20),RFX5_(N-494),YY1,HA-E2F1,Sin3Ak-20,c-Jun,ZNF263,Pol2-4H8	Name=148	NA	rs237831	0.96	0.96	0.956	0.972843	0.9245	1	0.9539	0.9955	0.9775	0.92	1	0.94	0.99	0.9424	1	1	T	0.0	B	0.0	B	0.030	N	1.000	P	0	N	4.15	T	-0.949	T	0.000	T	0.042	-0.475	1.812	-5.55	-1.490	-1.874	0.221	-0.474531	NA	1	0.925962	0.988439	NA	0.964	NA	9.5404714
699	16	3406626	3406626	G	A	exonic	OR2C1	NA	nonsynonymous SNV	OR2C1:NM_012368:exon1:c.G686A:p.R229H	exonic	ENSG00000168158	NA	nonsynonymous SNV	ENSG00000168158:ENST00000304936:exon1:c.G686A:p.R229H	NA	NA	16p13.3	NA	NA	NA	NA	rs11648783	0.26	0.26	0.255	0.252596	0.2614	0.1429	0.2421	0.3389	0.2474	0.27	0.14	0.25	0.37	0.2629	0.37	0.03	D	0.009	B	0.005	B	0.343	N	1.000	P	0.285	N	1.09	T	-0.950	T	0.000	T	0.049	0.103	4.555	-5.29	-0.962	-0.888	2.626	0.103149	NA	0.04	0.275116	0.346381	NA	0.319	NA	9.5339174
699	12	3788145	3788145	C	T	exonic	EFCAB4B	NA	nonsynonymous SNV	EFCAB4B:NM_001144958:exon6:c.G460A:p.E154K,EFCAB4B:NM_032680:exon6:c.G460A:p.E154K	exonic	ENSG00000130038	NA	nonsynonymous SNV	ENSG00000130038:ENST00000252322:exon6:c.G460A:p.E154K,ENSG00000130038:ENST00000440314:exon6:c.G460A:p.E154K,ENSG00000130038:ENST00000444507:exon6:c.G460A:p.E154K	NA	NA	12p13.32	Score=681;Name=V$PPARG_02	NA	NA	NA	rs242018	0.22	0.22	0.205	0.222444	0.2565	0.1319	0.33	0.1747	0.2689	0.26	0.14	0.33	0.18	0.2696	0.33	0.25	T	0.039	B	0.003	B	0.172	N	1.000	P	2.215	M	2.41	T	-1.046	T	0.000	T	0.074	0.384	6.084	1.51	-0.025	1.008	4.976	0.383782	NA	0.24	0.275581	0.187245	NA	0.232	NA	9.5316524
699	3	62578336	62578336	C	T	exonic	CADPS	NA	synonymous SNV	CADPS:NM_003716:exon7:c.G1413A:p.A471A,CADPS:NM_183393:exon7:c.G1413A:p.A471A,CADPS:NM_183394:exon7:c.G1413A:p.A471A	exonic	ENSG00000163618	NA	synonymous SNV	ENSG00000163618:ENST00000283269:exon7:c.G1413A:p.A471A,ENSG00000163618:ENST00000357948:exon7:c.G1413A:p.A471A,ENSG00000163618:ENST00000383710:exon7:c.G1413A:p.A471A	Score=525;Name=lod=182	NA	3p14.2	Score=755;Name=V$SEF1_C	Name=NFKB	Name=5	NA	rs17066673	0.06	0.06	0.065	0.0652955	0.0547	0.0734	0.049	0.0756	0.0654	0.05	0.06	0.04	0.08	0.0443	0.087	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.113052	3.113052	NA	0.036512	0.071039	NA	0.058	NA	9.5311546
699	10	24813454	24813454	G	A	exonic	KIAA1217	NA	nonsynonymous SNV	KIAA1217:NM_001098501:exon12:c.G2554A:p.A852T,KIAA1217:NM_019590:exon13:c.G2659A:p.A887T,KIAA1217:NM_001098500:exon14:c.G2419A:p.A807T	exonic	ENSG00000120549	NA	nonsynonymous SNV	ENSG00000120549:ENST00000307544:exon8:c.G1708A:p.A570T,ENSG00000120549:ENST00000376451:exon8:c.G1708A:p.A570T,ENSG00000120549:ENST00000396445:exon8:c.G1708A:p.A570T,ENSG00000120549:ENST00000396446:exon8:c.G1708A:p.A570T,ENSG00000120549:ENST00000438429:exon11:c.G2104A:p.A702T,ENSG00000120549:ENST00000376452:exon12:c.G2554A:p.A852T,ENSG00000120549:ENST00000376456:exon12:c.G2554A:p.A852T,ENSG00000120549:ENST00000458595:exon12:c.G2554A:p.A852T,ENSG00000120549:ENST00000376454:exon13:c.G2659A:p.A887T,ENSG00000120549:ENST00000376462:exon14:c.G2419A:p.A807T	NA	NA	10p12.1	NA	NA	NA	NA	rs10828663	0.22	0.22	0.222	0.1875	0.2893	0.1081	0.2147	0.2133	0.1104	0.28	0.11	0.23	0.23	0.2263	0.29	0.58	T	0.437	B	0.034	B	0.003	N	1.000	P	1.67	L	0.74	T	-1.013	T	0.000	T	0.3	1.997	12.63	4.61	1.336	4.371	14.350	1.99666	1.99666	0.05	0.28814	0.236723	ID=COSM1347282;OCCURENCE=1(large_intestine)	0.275	NA	9.5295934
699	17	42987524	42987524	T	C	exonic	GFAP	NA	nonsynonymous SNV	GFAP:NM_001131019:exon8:c.A1276G:p.T426A	exonic	ENSG00000131095	NA	nonsynonymous SNV	ENSG00000131095:ENST00000586125:exon2:c.A127G:p.T43A,ENSG00000131095:ENST00000435360:exon8:c.A1276G:p.T426A	Score=374;Name=lod=44	NA	17q21.31	NA	NA	NA	NA	rs9916491	0.24	0.24	0.242	0.24361	0.2624	0.251	0.2291	0.2307	0.2444	0.24	0.28	0.25	0.17	0.2675	0.28	0.21	T	0.0	B	0.0	B	.	.	0.000	P	0	N	-1.77	D	-1.100	T	0.000	T	0.053	1.517	11.02	3.79	0.924	0.753	6.750	1.517202	1.517202	0.15	0.274288	0.241071	NA	0.072	NA	9.5291454
699	19	41937095	41937095	G	A	downstream	ATP5SL	NA	NA	NA	downstream	ENSG00000105341	NA	NA	NA	NA	Name=Height	19q13.2	NA	Name=Pol2	Name=8	NA	rs17318596	0.39	0.39	0.349	0.376997	0.3847	0.5605	0.5072	0.1528	0.3906	0.4	0.54	0.43	0.17	0.3902	0.54	0.08	T	.	.	.	.	.	.	1.000	P	.	.	.	.	-1.001	T	0.000	T	.	0.623	7.349	-5.28	-2.745	-1.499	5.52	0.622576	NA	0.01	0.366399	0.214041	NA	0.312	NA	9.5253676
700	2	108994808	108994808	C	G	exonic	SULT1C4	NA	nonsynonymous SNV	SULT1C4:NM_006588:exon1:c.C15G:p.D5E	exonic	ENSG00000198075	NA	nonsynonymous SNV	ENSG00000198075:ENST00000272452:exon1:c.C15G:p.D5E,ENSG00000198075:ENST00000409309:exon1:c.C15G:p.D5E	NA	NA	2q12.3	NA	Name=TAL1_(SC-12984)	Name=6	NA	rs1402467	0.36	0.36	0.403	0.417732	0.2634	0.1081	0.1801	0.8752	0.4458	0.26	0.11	0.19	0.9	0.2992	0.9	1	T	0.0	B	0.0	B	0.000	N	1.000	P	0	N	5.01	T	-1.009	T	0.000	T	0.005	-0.565	1.45	-1.75	-0.973	-0.691	6.706	-0.565305	NA	0.46	0.246279	0.766682	NA	0.5	NA	9.5244544
700	5	32087374	32087374	A	G	exonic	PDZD2	NA	nonsynonymous SNV	PDZD2:NM_178140:exon19:c.A3820G:p.T1274A	exonic	ENSG00000133401	NA	nonsynonymous SNV	ENSG00000133401:ENST00000282493:exon19:c.A3820G:p.T1274A,ENSG00000133401:ENST00000438447:exon20:c.A3820G:p.T1274A	NA	NA	5p13.3	NA	NA	NA	NA	rs157496	0.33	0.33	0.324	0.359824	0.2773	0.4137	0.2349	0.3396	0.5051	0.28	0.42	0.25	0.35	0.3006	0.42	0.89	T	0.0	B	0.0	B	0.527	N	1.000	P	0	N	3.38	T	-0.957	T	0.000	T	0.012	-0.312	2.516	-5.16	-1.500	-2.248	2.028	-0.311796	NA	0.27	0.231163	0.337948	NA	0.239	NA	9.5242704
700	6	31079994	31079994	C	T	exonic	C6orf15	NA	nonsynonymous SNV	C6orf15:NM_014070:exon2:c.G142A:p.G48R	exonic	ENSG00000204542	NA	nonsynonymous SNV	ENSG00000204542:ENST00000259870:exon2:c.G142A:p.G48R	NA	NA	6p21.33	NA	NA	NA	NA	rs2233976	0.09	0.09	0.078	0.0798722	0.1163	0.0387	0.1455	0.0461	0.0838	0.12	0.03	0.17	0.04	0.1017	0.17	0.01	D	0.895	P	0.324	B	0.035	N	1.000	P	1.78	L	3.31	T	-0.972	T	0.008	T	0.092	2.922	15.74	3.01	0.605	0.533	6.540	2.921597	2.921597	0	0.091951	0.055453	ID=COSM150067;OCCURENCE=1(stomach)	0.051	NA	9.5233824
700	11	6023640	6023640	T	C	exonic	OR56A4	NA	nonsynonymous SNV	OR56A4:NM_001005179:exon1:c.A739G:p.I247V	exonic	ENSG00000183389	NA	nonsynonymous SNV	ENSG00000183389:ENST00000330728:exon1:c.A739G:p.I247V	NA	NA	11p15.4	NA	NA	Name=8	NA	rs11040249	0.16	0.16	0.161	0.164537	0.2684	0.0794	0.1945	0.0582	0.2679	0.28	0.08	0.19	0.07	0.2451	0.3	0.12	T	0.001	B	0.019	B	0.002	U	1.000	P	1.62	L	8.72	T	-1.023	T	0.000	T	0.064	0.806	8.238	3.72	1.669	0.189	11.668	0.806233	NA	0.37	0.298184	0.10836	NA	0.094	NA	9.5216494
700	3	111921116	111921116	C	A	exonic	SLC9C1	NA	nonsynonymous SNV	SLC9C1:NM_183061:exon18:c.G2303T:p.S768I	exonic	ENSG00000172139	NA	nonsynonymous SNV	ENSG00000172139:ENST00000487372:exon17:c.G2159T:p.S720I,ENSG00000172139:ENST00000305815:exon18:c.G2303T:p.S768I	Score=410;Name=lod=62	NA	3q13.2	NA	NA	NA	NA	rs9288938	0.32	0.32	0.294	0.335463	0.2376	0.3393	0.4049	0.3699	0.3364	0.24	0.32	0.38	0.37	0.305	0.38	0.25	T	0.906	P	0.747	P	0.005	N	0.995	P	1.935	M	-1.17	T	-1.055	T	0.000	T	0.106	2.835	15.44	1.96	0.072	0.167	6.080	2.835271	2.835271	0.05	0.270993	0.363368	NA	0.304	NA	9.5197404
700	20	44505973	44505973	T	C	exonic	ZSWIM3	NA	nonsynonymous SNV	ZSWIM3:NM_080752:exon2:c.T776C:p.V259A	exonic	ENSG00000132801	NA	nonsynonymous SNV	ENSG00000132801:ENST00000255152:exon2:c.T776C:p.V259A,ENSG00000132801:ENST00000454862:exon3:c.T758C:p.V253A	NA	NA	20q13.12	Score=751;Name=V$SEF1_C	NA	NA	NA	rs2903808	0.57	0.57	0.538	0.564896	0.6024	0.5615	0.6859	0.4297	0.6268	0.62	0.57	0.64	0.42	0.6057	0.64	1	T	0.0	B	0.0	B	0.003	N	1.000	P	-1.15	N	1.68	T	-0.964	T	0.000	T	0.037	-1.013	0.242	5.49	1.579	1.344	11.323	-1.013146	NA	1	0.605698	0.46709	NA	0.551	NA	9.5195354
700	9	15784560	15784560	A	G	exonic	CCDC171	NA	synonymous SNV	CCDC171:NM_173550:exon21:c.A3135G:p.A1045A	exonic	ENSG00000164989	NA	synonymous SNV	ENSG00000164989:ENST00000297641:exon21:c.A3135G:p.A1045A,ENSG00000164989:ENST00000380701:exon21:c.A3135G:p.A1045A	Score=598;Name=lod=360	NA	9p22.3	NA	NA	NA	NA	rs55780067	0.02	0.02	0.022	0.0251597	0.0557	NA	0.0202	0.0008	0.0562	0.05	NA	0.02	NA	0.0422	0.054	.	.	.	.	.	.	.	.	1.000	D	.	.	.	.	-1.052	T	0.022	T	.	1.17	9.759	-2.06	-0.559	-0.078	2.304	1.169548	NA	NA	0.049651	0.008398	NA	0.036	NA	9.5191156
700	8	55541513	55541513	T	C	exonic	RP1	NA	nonsynonymous SNV	RP1:NM_006269:exon4:c.T5071C:p.S1691P	exonic	ENSG00000104237	NA	nonsynonymous SNV	ENSG00000104237:ENST00000220676:exon4:c.T5071C:p.S1691P	Score=284;Name=lod=19	NA	8q12.1	NA	NA	NA	NA	rs414352	0.3	0.3	0.299	0.278954	0.2714	0.4415	0.3069	0.1687	0.2485	0.26	0.44	0.3	0.22	0.2725	0.44	0.43	T	0.0	B	0.0	B	0.378	N	1.000	P	1.265	L	1.99	T	-0.915	T	0.000	T	0.022	-0.095	3.533	3.7	0.230	-0.231	4.478	-0.095342	NA	0.14	0.272209	0.200409	NA	0.188	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000081373.1;CLNDSDB=.;CLNDSDBID=.	9.5172244
700	19	56572832	56572832	G	A	exonic	NLRP5	NA	nonsynonymous SNV	NLRP5:NM_153447:exon15:c.G3541A:p.V1181I	exonic	ENSG00000171487	NA	nonsynonymous SNV	ENSG00000171487:ENST00000390649:exon15:c.G3541A:p.V1181I	NA	NA	19q13.43	NA	NA	NA	NA	rs10409555	0.34	0.34	0.339	0.358826	0.2575	0.4415	0.2277	0.466	0.3262	0.26	0.43	0.23	0.45	0.3004	0.45	0.71	T	0.0	B	0.0	B	.	.	1.000	P	0.84	L	-0.65	T	-1.097	T	0.000	T	0.023	-1.828	0.009	-6.66	-4.845	-1.531	8.169	-1.828455	NA	0.63	0.258741	0.426724	NA	0.399	NA	9.5166924
701	6	160560845	160560845	A	G	exonic	SLC22A1	NA	nonsynonymous SNV	SLC22A1:NM_003057:exon7:c.A1222G:p.M408V,SLC22A1:NM_153187:exon7:c.A1222G:p.M408V	exonic	ENSG00000175003	NA	nonsynonymous SNV	ENSG00000175003:ENST00000324965:exon7:c.A1222G:p.M408V,ENSG00000175003:ENST00000366963:exon7:c.A1222G:p.M408V,ENSG00000175003:ENST00000457470:exon7:c.A1222G:p.M408V	NA	NA	6q25.3	NA	NA	Name=95	NA	rs628031	0.7	0.7	0.686	0.6877	0.5865	0.7411	0.7839	0.7307	0.6104	0.58	0.76	0.77	0.75	0.6405	0.77	0.84	T	0.0	B	0.001	B	0.553	N	1.000	P	-1.365	N	0.48	T	-1.097	T	0.018	T	0.024	-1.407	0.022	-9.1	-2.233	-2.590	1.367	-1.406937	NA	0.76	0.592209	0.726282	NA	0.58	NA	9.5141244
701	19	6903920	6903920	A	G	exonic	EMR1	NA	nonsynonymous SNV	EMR1:NM_001256254:exon4:c.A338G:p.N113S,EMR1:NM_001256252:exon6:c.A605G:p.N202S,EMR1:NM_001256253:exon7:c.A761G:p.N254S,EMR1:NM_001974:exon7:c.A761G:p.N254S	exonic	ENSG00000174837	NA	nonsynonymous SNV	ENSG00000174837:ENST00000381407:exon4:c.A338G:p.N113S,ENSG00000174837:ENST00000595026:exon5:c.A659G:p.N220S,ENSG00000174837:ENST00000381404:exon6:c.A605G:p.N202S,ENSG00000174837:ENST00000250572:exon7:c.A761G:p.N254S,ENSG00000174837:ENST00000312053:exon7:c.A761G:p.N254S	NA	NA	19p13.2	NA	NA	NA	NA	rs443658	0.42	0.42	0.428	0.432708	0.2396	0.4554	0.4193	0.6664	0.3016	0.24	0.49	0.38	0.65	0.3229	0.65	1	T	0.998	D	0.994	D	.	.	1.000	P	0.89	L	-2.22	D	-0.903	T	0.000	T	0.026	-0.456	1.89	-0.148	0.024	-0.193	5.798	-0.455654	NA	0.42	0.257093	0.588743	NA	0.428	NA	9.5137404
701	12	113553481	113553481	C	T	exonic	RASAL1	NA	nonsynonymous SNV	RASAL1:NM_001193521:exon10:c.G962A:p.R321H,RASAL1:NM_001193520:exon11:c.G962A:p.R321H,RASAL1:NM_004658:exon11:c.G962A:p.R321H	exonic	ENSG00000111344	NA	nonsynonymous SNV	ENSG00000111344:ENST00000446861:exon10:c.G962A:p.R321H,ENSG00000111344:ENST00000548055:exon10:c.G962A:p.R321H,ENSG00000111344:ENST00000261729:exon11:c.G962A:p.R321H,ENSG00000111344:ENST00000546530:exon11:c.G962A:p.R321H	Score=472;Name=lod=110	NA	12q24.13	NA	NA	NA	NA	rs1284879	0.79	0.79	0.728	0.780351	0.7734	0.7927	0.8559	0.7534	0.7577	0.76	0.79	0.85	0.78	0.7747	0.85	0.07	T	0.838	P	0.333	B	0.000	D	0.988	P	-0.145	N	2.3	T	-1.140	T	0.000	T	0.165	2.801	15.33	2.6	0.252	3.620	11.284	2.800696	2.800696	0.08	0.772442	0.754653	NA	0.812	NA	9.5127914
701	12	125438516	125438516	T	C	exonic	DHX37	NA	nonsynonymous SNV	DHX37:NM_032656:exon20:c.A2605G:p.S869G	exonic	ENSG00000150990	NA	nonsynonymous SNV	ENSG00000150990:ENST00000544745:exon17:c.A1966G:p.S656G,ENSG00000150990:ENST00000308736:exon20:c.A2605G:p.S869G	Score=336;Name=lod=31	NA	12q24.31	NA	NA	NA	NA	rs4516060	0.62	0.62	0.55	0.655751	0.5994	0.8462	0.6513	0.4463	0.8037	0.59	0.84	0.64	0.42	0.6358	0.84	1	T	0.0	B	0.0	B	0.000	N	0.989	P	-1.83	N	4.31	T	-1.012	T	0.000	T	0.055	-0.184	3.102	5.24	1.222	5.545	13.718	-0.184466	NA	1	0.585581	0.440763	ID=COSM203005;OCCURENCE=1(large_intestine)	0.5	NA	9.5125524
701	10	99116903	99116903	C	T	exonic	RRP12	NA	nonsynonymous SNV	RRP12:NM_001145114:exon32:c.G3659A:p.R1220Q,RRP12:NM_015179:exon34:c.G3842A:p.R1281Q	exonic	ENSG00000052749	NA	nonsynonymous SNV	ENSG00000052749:ENST00000536831:exon28:c.G2996A:p.R999Q,ENSG00000052749:ENST00000315563:exon31:c.G3542A:p.R1181Q,ENSG00000052749:ENST00000414986:exon32:c.G3659A:p.R1220Q,ENSG00000052749:ENST00000370992:exon34:c.G3842A:p.R1281Q	Score=582;Name=lod=310	NA	10q24.1	NA	NA	NA	NA	rs1048445	0.26	0.26	0.256	0.283347	0.2813	0.3075	0.2853	0.1762	0.4039	0.28	0.28	0.29	0.18	0.2737	0.29	0.52	T	0.013	B	0.003	B	0.004	N	0.804	P	-1.24	N	1.56	T	-0.950	T	0.000	T	0.052	1.543	11.11	3.1	0.374	2.901	10.381	1.542652	1.542652	0.73	0.267907	0.174535	NA	0.239	NA	9.5104264
701	6	100964147	100964147	G	C	exonic	ASCC3	NA	nonsynonymous SNV	ASCC3:NM_006828:exon39:c.C5984G:p.S1995C	exonic	ENSG00000112249	NA	nonsynonymous SNV	ENSG00000112249:ENST00000369162:exon39:c.C5984G:p.S1995C	Score=405;Name=lod=59	NA	6q16.3	NA	NA	NA	NA	rs240780	0.71	0.71	0.751	0.767772	0.5795	0.7857	0.611	0.9486	0.8098	0.56	0.76	0.64	0.95	0.6592	0.95	0.24	T	0.0	B	0.0	B	0.000	N	0.000	P	0	N	-0.19	T	-1.100	T	0.061	T	0.064	1.341	10.4	4.96	1.244	3.029	14.899	1.340708	1.340708	0.14	0.584535	0.87222	ID=COSM1132075;OCCURENCE=1(prostate)	0.71	NA	9.5100984
701	22	32756703	32756703	C	T	exonic	RFPL3	NA	nonsynonymous SNV	RFPL3:NM_001098535:exon2:c.C838T:p.R280C,RFPL3:NM_006604:exon3:c.C751T:p.R251C	exonic	ENSG00000128276	NA	nonsynonymous SNV	ENSG00000128276:ENST00000249007:exon2:c.C838T:p.R280C,ENSG00000128276:ENST00000382088:exon2:c.C751T:p.R251C,ENSG00000128276:ENST00000397468:exon3:c.C751T:p.R251C	NA	NA	22q12.3	NA	NA	NA	NA	rs73166367	NA	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3241	NA	0.06	T	0.981	D	0.857	P	.	.	0.755	N	2.275	M	-0.4	T	-0.508	T	0.366	T	0.304	1.306	10.28	0.475	0.473	0.183	6.668	1.306312	1.306312	0.01	NA	NA	ID=COSM1415947,COSM78412;OCCURENCE=1(ovary),1(large_intestine)	NA	NA	9.5092334
701	14	21215923	21215923	G	T	exonic	EDDM3A	NA	nonsynonymous SNV	EDDM3A:NM_006683:exon2:c.G184T:p.G62C	exonic	ENSG00000181562	NA	nonsynonymous SNV	ENSG00000181562:ENST00000326842:exon2:c.G184T:p.G62C	NA	NA	14q11.2	NA	NA	NA	NA	rs34552133	0.1	0.1	0.08	0.113019	0.1064	0.1627	0.0519	0.062	0.181	0.1	0.16	0.07	0.05	0.113	0.16	0.03	D	0.996	D	0.907	P	0.944	N	1.000	P	1.245	L	0.99	T	-1.090	T	0.001	T	0.088	1.798	11.97	0.182	-0.138	0.484	3.852	1.797746	1.797746	0.06	0.107209	0.064911	NA	0.058	NA	9.5067244
702	20	6065729	6065729	C	T	exonic	FERMT1	NA	nonsynonymous SNV	FERMT1:NM_017671:exon12:c.G1577A:p.R526K	exonic	ENSG00000101311	NA	nonsynonymous SNV	ENSG00000101311:ENST00000536936:exon11:c.G806A:p.R269K,ENSG00000101311:ENST00000217289:exon12:c.G1577A:p.R526K	Score=507;Name=lod=153	NA	20p12.3	NA	NA	NA	NA	rs2232074	0.48	0.48	0.032	0.457069	0.3797	0.6409	0.4784	0.4554	0.3344	0.36	0.67	0.47	0.42	0.3977	0.67	1	T	0.0	B	0.0	B	0.000	N	0.698	P	-2.67	N	-0.81	T	-0.915	T	0.000	T	0.054	0.375	6.035	5.17	0.905	6.256	11.280	0.374774	NA	1	0.051628	0.084203	NA	NA	NA	9.5043054
702	5	134782450	134782450	T	A	exonic	C5orf20	NA	stopgain	C5orf20:NM_130848:exon1:c.A349T:p.R117X	exonic	ENSG00000251380	NA	stopgain	ENSG00000251380:ENST00000503143:exon1:c.A349T:p.R117X	NA	NA	5q31.1	NA	NA	NA	NA	rs12520799	0.61	0.61	0.632	0.645168	0.5149	0.5635	0.5533	0.9319	0.5409	0.5	0.55	0.51	0.92	0.5177	0.92	0	D	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	4.232	22	-5.91	-1.602	-0.200	0.601	4.231785	4.231785	NA	0.463372	0.862233	NA	0.761	NA	9.504028
702	3	14187449	14187449	G	T	exonic	XPC	NA	nonsynonymous SNV	XPC:NM_001145769:exon16:c.C2704A:p.Q902K,XPC:NM_004628:exon16:c.C2815A:p.Q939K	exonic	ENSG00000154767	NA	nonsynonymous SNV	ENSG00000154767:ENST00000285021:exon16:c.C2815A:p.Q939K,ENSG00000154767:ENST00000449060:exon16:c.C2704A:p.Q902K	Score=436;Name=lod=79	NA	3p25.1	NA	Name=CTCF	NA	NA	rs2228001	0.66	0.66	0.622	0.684704	0.5954	0.6667	0.7176	0.7511	0.682	0.59	0.65	0.73	0.71	0.6325	0.73	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-2.125	N	1.93	T	-0.955	T	0.000	T	0.133	0.147	4.792	4.24	0.882	2.905	7.925	0.147259	NA	1	0.601483	0.729879	NA	0.406	NA	9.5039504
702	12	13526328	13526328	G	T	ncRNA_exonic	C12orf36	NA	NA	NA	exonic	ENSG00000180861	NA	nonsynonymous SNV	ENSG00000180861:ENST00000527705:exon2:c.C227A:p.A76E,ENSG00000180861:ENST00000318426:exon3:c.C227A:p.A76E	NA	NA	12p13.1	NA	NA	Name=6	NA	rs17821405	0.25	0.25	0.227	0.233227	0.3439	0.1677	0.2867	0.1581	0.2505	0.35	0.19	0.28	0.16	0.3044	0.35	0	D	0.962	D	0.445	B	.	.	1.000	P	.	.	1.53	T	-0.959	T	0.000	T	0.376	0.371	6.015	-0.015	-0.012	-1.011	5.117	0.371098	NA	NA	0.348256	0.178166	NA	0.145	NA	9.503444
702	4	100239319	100239319	T	C	exonic	ADH1B	NA	nonsynonymous SNV	ADH1B:NM_000668:exon3:c.A143G:p.H48R	exonic	ENSG00000196616	NA	nonsynonymous SNV	ENSG00000196616:ENST00000305046:exon3:c.A143G:p.H48R,ENSG00000196616:ENST00000394887:exon3:c.A23G:p.H8R	Score=417;Name=lod=66	Name=Upper aerodigestive tract cancers,Alcohol dependence,Esophageal cancer	4q23	NA	NA	NA	NA	rs1229984	0.79	0.79	0.803	0.841454	0.9712	0.3026	0.9424	0.9985	0.9796	0.98	0.27	0.92	1	0.9064	1	0.15	T	0.0	B	0.0	B	0.001	N	0.117	P	.	.	3.8	T	-0.998	T	0.000	T	0.022	0.445	6.418	3.57	0.318	2.012	10.534	0.44529	NA	0.38	0.953023	0.983886	NA	0.899	CLINSIG=other|other;CLNDBN=Alcohol_dependence|AERODIGESTIVE_TRACT_CANCER\x2c_SQUAMOUS_CELL\x2c_ALCOHOL-RELATED\x2c_PROTECTION_AGAINST;CLNREVSTAT=single|single;CLNACC=RCV000019813.1|RCV000019814.1;CLNDSDB=MedGen:OMIM|.;CLNDSDBID=CN028882:103780|.	9.5027104
702	20	16359567	16359567	A	G	exonic	KIF16B	NA	nonsynonymous SNV	KIF16B:NM_001199865:exon19:c.T3080C:p.M1027T,KIF16B:NM_001199866:exon19:c.T3080C:p.M1027T,KIF16B:NM_024704:exon19:c.T3080C:p.M1027T	exonic	ENSG00000089177	NA	nonsynonymous SNV	ENSG00000089177:ENST00000354981:exon19:c.T3080C:p.M1027T,ENSG00000089177:ENST00000355755:exon19:c.T3080C:p.M1027T,ENSG00000089177:ENST00000378003:exon19:c.T758C:p.M253T,ENSG00000089177:ENST00000408042:exon19:c.T3080C:p.M1027T	Score=346;Name=lod=34	NA	20p12.1	NA	Name=CTCF	NA	NA	rs6034464	0.76	0.76	0.76	0.785144	0.5497	0.9663	0.7003	0.8759	0.7781	0.55	0.97	0.69	0.9	0.6802	0.97	0.72	T	0.005	B	0.014	B	0.277	N	0.999	P	0	N	2.6	T	-0.976	T	0.000	T	0.035	0.428	6.324	4.07	0.926	3.855	10.024	0.427843	NA	0.03	0.601279	0.835225	NA	0.717	NA	9.5021544
702	7	91743150	91743150	A	G	exonic	CYP51A1	NA	synonymous SNV	CYP51A1:NM_000786:exon10:c.T1359C:p.H453H,CYP51A1:NM_001146152:exon10:c.T1044C:p.H348H	exonic	ENSG00000001630	NA	synonymous SNV	ENSG00000001630:ENST00000003100:exon10:c.T1359C:p.H453H,ENSG00000001630:ENST00000450723:exon10:c.T1044C:p.H348H	Score=612;Name=lod=410	NA	7q21.2	Score=874;Name=V$CREB_02	NA	NA	NA	rs7797834	0.35	0.35	0.35	0.359625	0.3867	0.1607	0.3588	0.4539	0.41	0.39	0.17	0.38	0.49	0.3771	0.49	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.891	T	0.000	T	.	2.164	13.19	3.73	0.894	3.131	10.444	2.164343	2.164343	NA	0.401512	0.471403	NA	0.406	NA	9.5013546
702	22	18300240	18300240	T	C	exonic	MICAL3	NA	synonymous SNV	MICAL3:NM_015241:exon26:c.A5187G:p.L1729L	exonic	ENSG00000243156	NA	synonymous SNV	ENSG00000243156:ENST00000441493:exon26:c.A5187G:p.L1729L	NA	NA	22q11.21	Score=953;Name=V$LYF1_01	NA	NA	NA	rs5992854	0.39	0.39	0.384	0.386182	0.3897	0.1726	0.2651	0.6876	0.2812	0.38	0.18	0.29	0.7	0.3781	0.7	.	.	.	.	.	.	.	.	0.006	P	.	.	.	.	.	.	.	.	.	-1.643	0.013	-2.63	-0.962	-1.496	6.781	-1.642718	NA	NA	0.401126	0.646932	NA	0.5	NA	9.4977406
702	20	60937516	60937516	A	G	exonic	LAMA5	NA	synonymous SNV	LAMA5:NM_005560:exon2:c.T390C:p.S130S	exonic	ENSG00000130702	NA	synonymous SNV	ENSG00000130702:ENST00000252999:exon2:c.T390C:p.S130S,ENSG00000130702:ENST00000370677:exon2:c.T390C:p.S130S,ENSG00000130702:ENST00000370692:exon2:c.T390C:p.S130S	Score=525;Name=lod=182	NA	20q13.33	Score=778;Name=V$YY1_02	Name=CEBPB,Pol2	Name=5	NA	rs41284996	0.05	0.05	0.048	0.0756789	0.0527	0.0089	0.0375	0.0787	0.1912	0.06	0.0035	0.05	0.09	0.071	0.098	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.469889	1.469889	NA	0.047625	0.074192	NA	0.13	NA	9.4953416
703	15	100269737	100269737	G	A	exonic	LYSMD4	NA	nonsynonymous SNV	LYSMD4:NM_152449:exon6:c.C485T:p.A162V	exonic	ENSG00000183060	NA	nonsynonymous SNV	ENSG00000183060:ENST00000409796:exon3:c.C482T:p.A161V,ENSG00000183060:ENST00000332728:exon4:c.C482T:p.A161V,ENSG00000183060:ENST00000545021:exon4:c.C104T:p.A35V,ENSG00000183060:ENST00000344791:exon6:c.C485T:p.A162V	NA	NA	15q26.3	NA	NA	NA	NA	rs8041078	0.17	0.17	0.157	0.177516	0.1163	0.2024	0.2392	0.2315	0.0982	0.12	0.18	0.19	0.22	0.1228	0.22	0.19	T	0.804	P	0.173	B	0.270	N	1.000	P	1.79	L	2.01	T	-1.003	T	0.000	T	0.045	1.2	9.877	3.91	1.144	0.099	14.035	1.2005	NA	0.2	0.103837	0.196323	NA	0.203	NA	9.4903964
703	4	2210065	2210065	C	A	exonic	POLN	NA	nonsynonymous SNV	POLN:NM_181808:exon3:c.G363T:p.Q121H	exonic	ENSG00000130997	NA	nonsynonymous SNV	ENSG00000130997:ENST00000382865:exon3:c.G363T:p.Q121H,ENSG00000130997:ENST00000511885:exon5:c.G363T:p.Q121H	NA	NA	4p16.3	NA	NA	NA	NA	rs2353552	0.06	0.06	0.053	0.0439297	0.1262	0.003	0.0677	0.0068	0.0348	0.13	0.0017	0.09	0.01	0.0889	0.13	0.02	D	0.976	D	0.628	P	0.001	N	1.000	P	0.975	L	0.81	T	-1.091	T	0.002	T	0.172	3.659	18.6	-0.11	0.219	-0.704	1.232	3.658914	3.658914	0.01	0.128286	0.024124	NA	0.036	NA	9.4899474
703	19	53056953	53056953	G	A	exonic	ZNF808	NA	nonsynonymous SNV	ZNF808:NM_001039886:exon5:c.G784A:p.D262N	exonic	ENSG00000198482	NA	nonsynonymous SNV	ENSG00000198482:ENST00000487863:exon3:c.G577A:p.D193N,ENSG00000198482:ENST00000359798:exon5:c.G784A:p.D262N	Score=304;Name=lod=23	NA	19q13.41	NA	NA	NA	NA	rs329965	0.21	0.21	0.18	0.217252	0.3022	0.0754	0.2983	0.1831	0.2648	0.3	0.06	0.3	0.18	0.2555	0.3	1	T	0.655	P	0.557	P	.	.	1.000	P	0.855	L	3.18	T	-1.040	T	0.000	T	0.004	1.083	9.422	-1.46	-0.660	-2.115	2.604	1.083267	NA	0.36	0.286977	0.194054	NA	0.138	NA	9.4886564
703	22	44379838	44379838	A	G	exonic	SAMM50	NA	nonsynonymous SNV	SAMM50:NM_015380:exon12:c.A1033G:p.I345V	exonic	ENSG00000100347	NA	nonsynonymous SNV	ENSG00000100347:ENST00000396202:exon11:c.A403G:p.I135V,ENSG00000100347:ENST00000350028:exon12:c.A1033G:p.I345V	Score=329;Name=lod=29	NA	22q13.31	NA	NA	NA	NA	rs8418	0.75	0.75	0.749	0.766973	0.6143	0.8194	0.6441	0.9183	0.7526	0.63	0.84	0.63	0.91	0.6499	0.91	1	T	0.0	B	0.002	B	0.000	N	1.000	P	-0.31	N	1.41	T	-0.964	T	0.000	T	0.069	-1.467	0.018	5.04	1.255	3.202	11.457	-1.466822	NA	1	0.58093	0.864276	NA	0.79	NA	9.4882034
703	1	67243024	67243024	C	A	exonic	TCTEX1D1	NA	nonsynonymous SNV	TCTEX1D1:NM_152665:exon5:c.C427A:p.L143I	exonic	ENSG00000152760	NA	nonsynonymous SNV	ENSG00000152760:ENST00000282670:exon5:c.C427A:p.L143I	Score=512;Name=lod=161	NA	1p31.3	Score=870;Name=V$NKX3A_01	NA	NA	NA	rs2133173	0.22	0.22	0.21	0.197684	0.2932	0.1012	0.2219	0.205	0.1718	0.31	0.1	0.25	0.21	0.2589	0.31	0.4	T	0.044	B	0.063	B	0.277	N	1.000	P	1.845	L	1.56	T	-1.042	T	0.029	T	0.054	0.267	5.444	1.91	0.105	1.313	7.868	0.267048	NA	NA	0.295581	0.23468	NA	0.246	NA	9.4856524
704	20	4843470	4843470	C	A	exonic	SLC23A2	NA	synonymous SNV	SLC23A2:NM_005116:exon14:c.G1440T:p.A480A,SLC23A2:NM_203327:exon14:c.G1440T:p.A480A	exonic	ENSG00000089057	NA	synonymous SNV	ENSG00000089057:ENST00000424750:exon11:c.G1098T:p.A366A,ENSG00000089057:ENST00000338244:exon14:c.G1440T:p.A480A,ENSG00000089057:ENST00000379333:exon14:c.G1440T:p.A480A	Score=507;Name=lod=154	NA	20p13	NA	NA	NA	NA	rs34073337	0.05	0.05	0.057	0.0626997	0.0666	NA	0.0533	0.1233	0.0481	0.07	0.0017	0.06	0.09	0.0571	0.12	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.027	T	0.001	T	.	-0.509	1.669	-6.79	-1.003	-0.896	2.992	-0.509488	NA	NA	0.05907	0.111212	NA	0.109	NA	9.4838966
704	1	245245402	245245402	C	T	exonic	EFCAB2	NA	synonymous SNV	EFCAB2:NM_001143943:exon4:c.C201T:p.P67P,EFCAB2:NM_032328:exon5:c.C201T:p.P67P	exonic	ENSG00000203666	NA	synonymous SNV	ENSG00000203666:ENST00000447569:exon4:c.C201T:p.P67P,ENSG00000203666:ENST00000366522:exon5:c.C609T:p.P203P,ENSG00000203666:ENST00000366523:exon5:c.C201T:p.P67P	Score=565;Name=lod=263	NA	1q44	Score=1000;Name=V$AP2REP_01	NA	NA	NA	rs10927387	0.32	0.32	0.335	0.289337	0.4453	0.1935	0.2853	0.2489	0.2853	0.43	0.22	0.31	0.27	0.3438	0.43	0	D	.	.	.	.	0.049	N	0.000	P	.	.	-1.24	T	-1.012	T	0.000	T	.	1.133	9.619	2.57	0.722	-0.343	3.951	1.133382	NA	NA	0.394651	0.252156	ID=COSM146846;OCCURENCE=1(stomach)	0.348	NA	9.4829156
704	19	17088319	17088319	G	T	exonic	CPAMD8	NA	nonsynonymous SNV	CPAMD8:NM_015692:exon15:c.C1758A:p.D586E	exonic	ENSG00000160111	NA	nonsynonymous SNV	ENSG00000160111:ENST00000443236:exon15:c.C1758A:p.D586E	Score=401;Name=lod=57	NA	19p13.11	NA	NA	NA	NA	rs3745335	0.34	0.34	0.328	0.349042	0.2863	0.2837	0.3012	0.503	0.3067	0.3	0.29	0.31	0.5	0.2936	0.5	0.96	T	0.002	B	0.023	B	0.707	U	0.041	P	0.4	N	.	.	-0.965	T	0.000	T	0.023	-0.467	1.841	-4.91	-2.316	-0.780	1.055	-0.46732	NA	0.58	0.270703	0.426056	NA	0.312	NA	9.4827304
704	3	38766675	38766675	A	G	exonic	SCN10A	NA	nonsynonymous SNV	SCN10A:NM_006514:exon17:c.T3218C:p.V1073A	exonic	ENSG00000185313	NA	nonsynonymous SNV	ENSG00000185313:ENST00000449082:exon17:c.T3218C:p.V1073A	NA	Name=Electrocardiographic conduction measures,Electrocardiographic traits	3p22.2	NA	NA	NA	NA	rs6795970	0.74	0.74	0.745	0.757987	0.5905	0.8194	0.6441	0.9478	0.6912	0.58	0.83	0.64	0.94	0.6586	0.94	0.79	T	0.0	B	0.0	B	0.000	N	1.000	P	-0.115	N	-3.69	D	-0.912	T	0.000	T	0.018	-0.357	2.315	-4.56	-1.287	-0.830	0.783	-0.356928	NA	NA	0.60186	0.899001	NA	0.681	NA	9.4823734
704	12	39695445	39695445	G	A	exonic	KIF21A	NA	synonymous SNV	KIF21A:NM_001173463:exon33:c.C4657T:p.L1553L,KIF21A:NM_001173465:exon33:c.C4609T:p.L1537L,KIF21A:NM_017641:exon36:c.C4729T:p.L1577L,KIF21A:NM_001173464:exon37:c.C4768T:p.L1590L	exonic	ENSG00000139116	NA	synonymous SNV	ENSG00000139116:ENST00000551264:exon13:c.C1711T:p.L571L,ENSG00000139116:ENST00000541463:exon33:c.C4609T:p.L1537L,ENSG00000139116:ENST00000544797:exon33:c.C4657T:p.L1553L,ENSG00000139116:ENST00000361961:exon36:c.C4729T:p.L1577L,ENSG00000139116:ENST00000395670:exon36:c.C4771T:p.L1591L,ENSG00000139116:ENST00000361418:exon37:c.C4768T:p.L1590L	Score=548;Name=lod=225	NA	12q12	Score=772;Name=V$AHRARNT_02	Name=GATA-2	Name=7	NA	rs2271477	0.08	0.08	0.08	0.0810703	0.0696	0.128	0.121	0.0219	0.0961	0.07	0.15	0.1	0.02	0.0649	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.838588	NA	NA	0.05093	0.026555	NA	0.065	NA	9.4812366
704	17	7386280	7386280	G	A	exonic	SLC35G6	NA	stopgain	SLC35G6:NM_001102614:exon2:c.G977A:p.W326X	exonic	ENSG00000259224	NA	stopgain	ENSG00000259224:ENST00000412468:exon2:c.G977A:p.W326X	Score=425;Name=lod=71	NA	17p13.1	NA	NA	NA	NA	rs7214088	0.59	0.59	0.688	0.746406	0.7734	0.9187	0.8718	0.5696	0.6912	0.56	0.7	0.7	0.41	0.7461	0.7	0.2	T	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	2.343	13.79	3.62	0.773	2.382	7.681	2.343383	2.343383	0.31	NA	NA	NA	NA	NA	9.4805
704	8	10467604	10467604	C	A	exonic	RP1L1	NA	nonsynonymous SNV	RP1L1:NM_178857:exon4:c.G4004T:p.G1335V	exonic	ENSG00000183638	NA	nonsynonymous SNV	ENSG00000183638:ENST00000382483:exon4:c.G4004T:p.G1335V	NA	NA	8p23.1	NA	NA	NA	NA	rs74366179	0.18	0.18	0.128	NA	NA	NA	NA	NA	NA	0.15	0.22	0.19	0.15	0.2033	0.24	0.01	D	0.995	D	0.72	P	.	.	1.000	P	0	N	3.38	T	-0.875	T	0.000	T	0.035	1.423	10.7	-0.449	0.008	-0.865	6.577	1.422679	1.422679	0.01	0.152069	0.132172	ID=COSM1330390;OCCURENCE=1(ovary)	0.188	NA	9.4779644
704	1	28209366	28209366	A	G	exonic	THEMIS2	NA	nonsynonymous SNV	THEMIS2:NM_001105556:exon4:c.A1531G:p.K511E	exonic	ENSG00000130775	NA	nonsynonymous SNV	ENSG00000130775:ENST00000373921:exon4:c.A1531G:p.K511E,ENSG00000130775:ENST00000328928:exon5:c.A1144G:p.K382E	Score=259;Name=lod=15	NA	1p35.3	NA	NA	NA	NA	rs3766400	0.45	0.45	0.406	0.450479	0.6322	0.501	0.5029	0.0711	0.6871	0.63	0.49	0.53	0.09	0.5829	0.64	0.29	T	0.0	B	0.0	B	0.000	N	0.000	P	-2.2	N	2.66	T	-0.933	T	0.000	T	0.306	-0.519	1.629	4.0	1.258	1.850	3.223	-0.519377	NA	1	0.641351	0.152547	NA	0.428	NA	9.4768824
704	8	98991221	98991221	A	G	exonic	MATN2	NA	nonsynonymous SNV	MATN2:NM_002380:exon6:c.A1066G:p.K356E,MATN2:NM_030583:exon6:c.A1066G:p.K356E	exonic	ENSG00000132561	NA	nonsynonymous SNV	ENSG00000132561:ENST00000522270:exon2:c.A157G:p.K53E,ENSG00000132561:ENST00000519585:exon3:c.A214G:p.K72E,ENSG00000132561:ENST00000520016:exon5:c.A1066G:p.K356E,ENSG00000132561:ENST00000522025:exon5:c.A214G:p.K72E,ENSG00000132561:ENST00000254898:exon6:c.A1066G:p.K356E,ENSG00000132561:ENST00000521689:exon6:c.A1066G:p.K356E,ENSG00000132561:ENST00000524308:exon6:c.A1066G:p.K356E	Score=417;Name=lod=66	NA	8q22.1	Score=823;Name=V$EVI1_03	NA	NA	NA	rs1869609	0.46	0.46	0.457	0.413738	0.662	0.2937	0.4409	0.3729	0.318	0.66	0.26	0.47	0.38	0.5363	0.66	0.14	T	0.005	B	0.029	B	0.044	N	0.717	P	1.365	L	-4.03	D	-0.952	T	0.000	T	0.285	1.529	11.06	-2.27	-0.258	0.083	5.163	1.528751	1.528751	0.34	0.658201	0.449927	NA	0.478	NA	9.4768324
704	16	1306986	1306986	C	T	exonic	TPSD1	NA	nonsynonymous SNV	TPSD1:NM_012217:exon3:c.C443T:p.T148M	exonic	ENSG00000095917	NA	nonsynonymous SNV	ENSG00000095917:ENST00000211076:exon3:c.C443T:p.T148M,ENSG00000095917:ENST00000397534:exon4:c.C422T:p.T141M	Score=272;Name=lod=17	NA	16p13.3	NA	NA	NA	NA	rs72775467	0.35	0.35	0.213	NA	NA	NA	NA	NA	NA	0.35	0.44	0.31	0.29	0.3581	0.44	0.07	T	0.665	P	0.144	B	0.784	N	1.000	P	1.545	L	-1.52	D	-1.035	T	0.000	T	0.354	0.026	4.148	1.57	0.384	0.429	3.811	0.025917	NA	0.05	NA	NA	ID=COSM1579273;OCCURENCE=1(NS)	NA	NA	9.4752334
704	19	9090784	9090784	C	T	exonic	MUC16	NA	nonsynonymous SNV	MUC16:NM_024690:exon1:c.G1031A:p.R344K	exonic	ENSG00000181143	NA	nonsynonymous SNV	ENSG00000181143:ENST00000397910:exon1:c.G1031A:p.R344K	NA	NA	19p13.2	NA	NA	NA	NA	rs73495785	0.17	0.17	0.154	0.169728	0.1252	0.1746	0.1758	0.2042	0.1595	0.12	0.16	0.17	0.25	0.1338	0.25	0	D	0.862	P	0.261	B	.	.	.	.	0	N	4.24	T	-0.888	T	0.000	T	0.059	-0.008	3.972	-1.38	-0.287	-0.953	2.670	-0.008126	NA	0	0.099238	0.16756	ID=COSM303963,COSM303964;OCCURENCE=1(central_nervous_system)	0.094	NA	9.4750954
705	11	69063728	69063728	G	C	exonic	MYEOV	NA	nonsynonymous SNV	MYEOV:NM_138768:exon3:c.G811C:p.G271R	exonic	ENSG00000172927	NA	nonsynonymous SNV	ENSG00000172927:ENST00000535407:exon2:c.G637C:p.G213R,ENSG00000172927:ENST00000308946:exon3:c.G811C:p.G271R,ENSG00000172927:ENST00000441339:exon3:c.G811C:p.G271R	NA	NA	11q13.3	NA	Name=Pol2-4H8	NA	NA	rs11228610	0.15	0.15	0.136	0.179912	0.1083	0.2153	0.0922	0.1785	0.2812	0.1	0.2	0.1	0.2	0.1429	0.22	0	D	0.902	P	0.278	B	.	.	1.000	P	0	N	1.61	T	-1.011	T	0.000	T	0.112	0.544	6.945	-0.159	-0.078	-0.360	3.223	0.544246	NA	0.8	0.108174	0.156136	NA	0.188	NA	9.4739594
705	3	135722264	135722264	A	G	exonic	PPP2R3A	NA	nonsynonymous SNV	PPP2R3A:NM_002718:exon2:c.A1924G:p.S642G	exonic	ENSG00000073711	NA	nonsynonymous SNV	ENSG00000073711:ENST00000264977:exon2:c.A1924G:p.S642G	Score=403;Name=lod=58	NA	3q22.3	NA	NA	NA	NA	rs17197552	0.16	0.16	0.145	0.172724	0.2783	0.0288	0.1412	0.1505	0.2648	0.27	0.02	0.16	0.13	0.2662	0.31	0.13	T	0.0	B	0.001	B	0.178	N	0.000	P	0.695	N	3.33	T	-0.910	T	0.000	T	0.028	1.01	9.126	3.47	0.481	1.520	8.219	1.010279	NA	0.12	0.314884	0.174841	NA	0.203	NA	9.4739494
705	2	37406680	37406680	C	G	exonic	SULT6B1	NA	nonsynonymous SNV	SULT6B1:NM_001032377:exon4:c.G336C:p.L112F	exonic	ENSG00000138068	NA	nonsynonymous SNV	ENSG00000138068:ENST00000260637:exon4:c.G336C:p.L112F,ENSG00000138068:ENST00000535679:exon4:c.G450C:p.L150F,ENSG00000138068:ENST00000407963:exon5:c.G336C:p.L112F	Score=522;Name=lod=176	NA	2p22.2	Score=826;Name=V$OCT1_04	NA	NA	NA	rs10205833	0.41	0.41	0.396	0.42492	0.2614	0.8016	0.4207	0.2277	0.4744	0.28	0.8	0.38	0.21	0.348	0.8	1	T	0.0	B	0.0	B	0.000	N	0.000	P	-3.05	N	-1.55	D	-0.943	T	0.000	T	0.1	-0.91	0.417	0.367	-0.041	0.681	5.287	-0.910131	NA	1	0.25093	0.24739	NA	0.413	NA	9.4730034
705	14	24845841	24845841	T	C	exonic	NFATC4	NA	nonsynonymous SNV	NFATC4:NM_001198966:exon9:c.T2188C:p.S730P,NFATC4:NM_004554:exon9:c.T2398C:p.S800P,NFATC4:NM_001136022:exon10:c.T2587C:p.S863P	exonic	ENSG00000100968	NA	nonsynonymous SNV	ENSG00000100968:ENST00000555393:exon4:c.T262C:p.S88P,ENSG00000100968:ENST00000555802:exon4:c.T262C:p.S88P,ENSG00000100968:ENST00000555167:exon6:c.T1003C:p.S335P,ENSG00000100968:ENST00000556759:exon6:c.T1003C:p.S335P,ENSG00000100968:ENST00000554344:exon8:c.T2188C:p.S730P,ENSG00000100968:ENST00000557451:exon8:c.T2188C:p.S730P,ENSG00000100968:ENST00000250373:exon9:c.T2398C:p.S800P,ENSG00000100968:ENST00000422617:exon9:c.T2362C:p.S788P,ENSG00000100968:ENST00000553708:exon9:c.T2398C:p.S800P,ENSG00000100968:ENST00000553879:exon9:c.T2188C:p.S730P,ENSG00000100968:ENST00000555453:exon9:c.T2362C:p.S788P,ENSG00000100968:ENST00000413692:exon10:c.T2587C:p.S863P,ENSG00000100968:ENST00000424781:exon10:c.T2437C:p.S813P,ENSG00000100968:ENST00000539237:exon10:c.T2494C:p.S832P,ENSG00000100968:ENST00000555590:exon10:c.T2437C:p.S813P,ENSG00000100968:ENST00000556279:exon10:c.T2494C:p.S832P	Score=489;Name=lod=130	NA	14q12	NA	Name=CTCF_(SC-5916),YY1_(C-20),CTCF,Rad21	Name=3	NA	rs7149586	0.39	0.39	0.387	0.358027	0.6571	0.1538	0.4539	0.2209	0.3783	0.63	0.16	0.49	0.22	0.5384	0.67	0.86	T	0.0	B	0.0	B	0.031	N	0.000	P	0.345	N	3.14	T	-0.933	T	0.000	T	0.15	1.55	11.14	2.27	0.294	-0.270	5.340	1.549706	1.549706	0.38	0.668721	0.287108	NA	0.536	NA	9.4691124
705	17	61903445	61903445	G	C	exonic	FTSJ3	NA	nonsynonymous SNV	FTSJ3:NM_017647:exon5:c.C271G:p.Q91E	exonic	ENSG00000108592	NA	nonsynonymous SNV	ENSG00000108592:ENST00000580272:exon4:c.C271G:p.Q91E,ENSG00000108592:ENST00000427159:exon5:c.C271G:p.Q91E,ENSG00000108592:ENST00000581209:exon5:c.C271G:p.Q91E	Score=611;Name=lod=406	NA	17q23.3	NA	NA	NA	NA	rs2584625	0.68	0.68	0.694	0.732827	0.5984	0.5556	0.6816	0.9796	0.7566	0.6	0.58	0.64	0.97	0.6597	0.97	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-1.78	N	1.61	T	-0.955	T	0.000	T	0.184	2.818	15.39	4.74	1.367	5.111	13.178	2.818139	2.818139	1	0.606512	0.91103	NA	0.681	NA	9.4687214
706	9	96021312	96021312	G	A	exonic	WNK2	NA	nonsynonymous SNV	WNK2:NM_006648:exon11:c.G2482A:p.V828M	exonic	ENSG00000165238	NA	nonsynonymous SNV	ENSG00000165238:ENST00000395475:exon10:c.G2284A:p.V762M,ENSG00000165238:ENST00000448039:exon10:c.G2326A:p.V776M,ENSG00000165238:ENST00000297954:exon11:c.G2482A:p.V828M,ENSG00000165238:ENST00000349097:exon11:c.G1318A:p.V440M,ENSG00000165238:ENST00000395477:exon11:c.G2482A:p.V828M,ENSG00000165238:ENST00000427277:exon11:c.G1318A:p.V440M	NA	NA	9q22.31	NA	NA	NA	NA	rs10761203	0.38	0.38	0.353	0.313498	0.4573	0.4345	0.5058	0.0681	0.2362	0.46	0.44	0.5	0.09	0.4327	0.5	0.13	T	0.734	P	0.101	B	0.290	N	0.998	P	0.895	L	0.16	T	-0.915	T	0.000	T	0.294	1.262	10.12	2.9	1.143	1.047	3.581	1.262253	1.262253	0.02	0.481856	0.14571	ID=COSM456261,COSM456262;OCCURENCE=1(breast)	0.348	NA	9.4614774
706	6	49814379	49814379	T	C	exonic	CRISP1	NA	nonsynonymous SNV	CRISP1:NM_001131:exon5:c.A289G:p.T97A,CRISP1:NM_001205220:exon5:c.A289G:p.T97A,CRISP1:NM_170609:exon5:c.A289G:p.T97A	exonic	ENSG00000124812	NA	nonsynonymous SNV	ENSG00000124812:ENST00000329411:exon4:c.A289G:p.T97A,ENSG00000124812:ENST00000355791:exon4:c.A289G:p.T97A,ENSG00000124812:ENST00000335847:exon5:c.A289G:p.T97A,ENSG00000124812:ENST00000505118:exon5:c.A289G:p.T97A,ENSG00000124812:ENST00000507853:exon5:c.A289G:p.T97A,ENSG00000124812:ENST00000536021:exon5:c.A289G:p.T97A	NA	NA	6p12.3	NA	NA	NA	NA	rs3209304	0.06	0.06	0.045	0.0439297	0.1272	NA	0.0504	0.0091	0.046	0.13	NA	0.06	0.01	0.0972	0.15	.	.	0.98	D	0.699	P	0.515	N	1.000	P	1.825	L	3.21	T	-1.003	T	0.016	T	0.07	1.323	10.34	2.77	0.842	0.287	4.506	1.323035	1.323035	0.22	0.148605	0.032683	NA	0.101	NA	9.4603284
706	11	6816875	6816875	G	A	exonic	OR6A2	NA	nonsynonymous SNV	OR6A2:NM_003696:exon1:c.C65T:p.A22V	exonic	ENSG00000184933	NA	nonsynonymous SNV	ENSG00000184933:ENST00000332601:exon1:c.C65T:p.A22V	NA	NA	11p15.4	NA	NA	NA	NA	rs7122644	0.3	0.3	0.289	0.312899	0.2932	0.4623	0.2695	0.1906	0.3753	0.3	0.41	0.25	0.19	0.2991	0.41	0.54	T	0.001	B	0.0	B	0.867	N	1.000	P	0.615	N	7.44	T	-0.979	T	0.000	T	0.02	0.551	6.981	-9.9	-2.137	-1.986	15.104	0.551115	NA	0.52	0.281308	0.222172	NA	0.312	NA	9.4597254
707	19	33600764	33600764	T	C	exonic	GPATCH1	NA	nonsynonymous SNV	GPATCH1:NM_018025:exon11:c.T1427C:p.L476P	exonic	ENSG00000076650	NA	nonsynonymous SNV	ENSG00000076650:ENST00000170564:exon11:c.T1427C:p.L476P	NA	NA	19q13.11	NA	NA	NA	NA	rs2287679	0.44	0.44	0.45	0.533546	0.2416	0.5079	0.2867	0.8003	0.6748	0.25	0.5	0.3	0.78	0.3712	0.78	0.28	T	0.0	B	0.001	B	0.445	N	0.989	P	-1.03	N	1.54	T	-0.997	T	0.000	T	0.031	-0.214	2.963	5.74	1.454	1.138	9.437	-0.214135	NA	0.19	0.267093	0.726963	NA	0.261	NA	9.4534404
707	12	7022085	7022085	T	A	exonic	LRRC23	NA	nonsynonymous SNV	LRRC23:NM_001135217:exon7:c.T950A:p.V317E,LRRC23:NM_201650:exon7:c.T950A:p.V317E	exonic	ENSG00000010626	NA	nonsynonymous SNV	ENSG00000010626:ENST00000007969:exon7:c.T950A:p.V317E,ENSG00000010626:ENST00000443597:exon7:c.T950A:p.V317E	Score=325;Name=lod=28	NA	12p13.31	NA	NA	NA	NA	rs1057077	0.38	0.38	0.404	0.401358	0.2952	0.2579	0.2752	0.7141	0.3252	0.29	0.25	0.35	0.69	0.3045	0.69	1	T	0.0	B	0.0	B	.	.	0.000	P	-2.215	N	0.66	T	-0.927	T	0.000	T	0.097	-0.933	0.372	5.27	0.931	4.721	11.904	-0.933309	NA	1	0.280233	0.616886	NA	0.42	NA	9.4534004
707	3	49689210	49689210	G	A	exonic	BSN	NA	nonsynonymous SNV	BSN:NM_003458:exon5:c.G2221A:p.A741T	exonic	ENSG00000164061	NA	nonsynonymous SNV	ENSG00000164061:ENST00000296452:exon5:c.G2221A:p.A741T	NA	NA	3p21.31	NA	NA	NA	NA	rs34762726	0.24	0.24	0.23	0.208866	0.3241	0.0565	0.1729	0.2632	0.1994	0.33	0.06	0.23	0.3	0.2649	0.33	0.72	T	0.003	B	0.006	B	0.230	N	1.000	P	0.29	N	2.32	T	-0.924	T	0.000	T	0.064	-0.652	1.133	4.17	1.092	1.965	6.161	-0.65194	NA	0.74	0.298441	0.26759	NA	0.304	NA	9.4458924
707	3	142681249	142681249	G	A	exonic	PAQR9	NA	synonymous SNV	PAQR9:NM_198504:exon1:c.C930T:p.S310S	exonic	ENSG00000188582	NA	synonymous SNV	ENSG00000188582:ENST00000340634:exon1:c.C930T:p.S310S	Score=664;Name=lod=669	NA	3q23	NA	NA	NA	NA	rs62276870	0.04	0.04	0.052	0.028754	0.0895	NA	0.0389	0.0053	0.0204	0.09	NA	0.05	0.01	0.0531	0.09	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.944	T	0.015	T	.	0.654	7.505	2.88	0.075	2.840	13.488	0.653518	NA	NA	0.078953	0.013618	NA	0.08	NA	9.4451136
708	12	6562823	6562823	C	T	exonic	TAPBPL	NA	nonsynonymous SNV	TAPBPL:NM_018009:exon3:c.C506T:p.A169V	exonic	ENSG00000139192	NA	nonsynonymous SNV	ENSG00000139192:ENST00000544021:exon2:c.C275T:p.A92V,ENSG00000139192:ENST00000266556:exon3:c.C506T:p.A169V	NA	NA	12p13.31	NA	NA	NA	NA	rs2041387	0.26	0.26	0.241	0.258187	0.3042	0.3224	0.1744	0.1846	0.3037	0.29	0.33	0.17	0.18	0.2806	0.33	0.42	T	0.003	B	0.003	B	0.049	N	1.000	P	1.78	L	3.02	T	-1.014	T	0.000	T	0.224	1.074	9.385	4.56	2.097	1.069	12.858	1.073965	NA	0.35	0.304884	0.187245	NA	0.21	NA	9.4436494
708	6	32944094	32944094	G	C	exonic	BRD2	NA	synonymous SNV	BRD2:NM_001199455:exon5:c.G678C:p.L226L,BRD2:NM_001199456:exon5:c.G537C:p.L179L,BRD2:NM_001113182:exon6:c.G678C:p.L226L,BRD2:NM_005104:exon6:c.G678C:p.L226L	exonic	ENSG00000204256	NA	synonymous SNV	ENSG00000204256:ENST00000395287:exon5:c.G678C:p.L226L,ENSG00000204256:ENST00000449085:exon5:c.G537C:p.L179L,ENSG00000204256:ENST00000607833:exon5:c.G678C:p.L226L,ENSG00000204256:ENST00000374825:exon6:c.G678C:p.L226L,ENSG00000204256:ENST00000374831:exon6:c.G678C:p.L226L,ENSG00000204256:ENST00000395289:exon6:c.G678C:p.L226L,ENSG00000204256:ENST00000495733:exon6:c.G678C:p.L226L,ENSG00000204256:ENST00000443797:exon7:c.G318C:p.L106L	Score=637;Name=lod=516	NA	6p21.32	NA	Name=Pol2-4H8,Pol2,Pol2(b)	NA	NA	rs15912	0.04	0.04	0.043	0.0477236	0.0805	0.0208	0.0548	0.0068	0.092	0.08	0.02	0.06	0.01	0.0652	0.08	.	.	.	.	.	.	.	.	1.000	D	.	.	.	.	-1.034	T	0.094	T	.	0.724	7.849	1.43	0.141	-0.195	5.134	0.72359	NA	NA	0.077335	0.020516	NA	0.043	NA	9.4436316
708	6	80196848	80196848	C	T	exonic	LCA5	NA	nonsynonymous SNV	LCA5:NM_001122769:exon8:c.G1967A:p.G656D,LCA5:NM_181714:exon9:c.G1967A:p.G656D	exonic	ENSG00000135338	NA	nonsynonymous SNV	ENSG00000135338:ENST00000369846:exon8:c.G1967A:p.G656D,ENSG00000135338:ENST00000392959:exon9:c.G1967A:p.G656D	Score=333;Name=lod=30	NA	6q14.1	NA	NA	NA	NA	rs1875845	0.35	0.35	0.371	0.355232	0.2674	0.2698	0.3444	0.553	0.274	0.27	0.28	0.35	0.55	0.3167	0.55	1	T	0.0	B	0.0	B	0.022	N	1.000	P	-1.5	N	1.72	T	-0.922	T	0.004	T	0.062	-1.484	0.018	4.38	0.909	1.009	6.683	-1.48355	NA	0	0.30856	0.514753	NA	0.507	NA	9.4406734
708	18	55103512	55103512	C	T	exonic	ONECUT2	NA	synonymous SNV	ONECUT2:NM_004852:exon1:c.C564T:p.S188S	exonic	ENSG00000119547	NA	synonymous SNV	ENSG00000119547:ENST00000491143:exon1:c.C564T:p.S188S	Score=823;Name=lod=2954	NA	18q21.31	Score=902;Name=V$ATF_01	Name=SUZ12	Name=8	NA	rs79019704	0.1	0.1	0.072	0.144369	0.0646	0.1429	0.1427	0.1732	0.1902	0.06	0.13	0.1	0.13	0.104	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.253658	NA	NA	0.057903	0.123855	ID=COSM1559501;OCCURENCE=1(central_nervous_system)	0.036	NA	9.4401636
708	6	29912280	29912280	T	C	exonic	HLA-A	NA	nonsynonymous SNV	HLA-A:NM_001242758:exon5:c.T899C:p.L300P,HLA-A:NM_002116:exon5:c.T899C:p.L300P	exonic	ENSG00000206503	NA	nonsynonymous SNV	ENSG00000206503:ENST00000376806:exon5:c.T899C:p.L300P,ENSG00000206503:ENST00000376809:exon5:c.T899C:p.L300P,ENSG00000206503:ENST00000396634:exon7:c.T899C:p.L300P	Score=243;Name=lod=13	NA	6p22.1	NA	Name=Pol2,Pol2-4H8	NA	NA	rs1136903	0.67	0.67	0.669	0.686302	0.6342	0.6885	0.7738	0.7307	0.6155	0.6	0.7	0.72	0.72	0.6575	0.72	0	D	0.0	B	0.001	B	0.021	N	0.965	P	.	.	6.02	T	-0.906	T	0.001	T	0.157	0.107	4.576	2.46	0.264	-0.580	5.789	0.107015	NA	1	0.602805	0.696559	NA	0.072	NA	9.4388284
708	12	7867847	7867847	G	C	exonic	DPPA3	NA	nonsynonymous SNV	DPPA3:NM_199286:exon2:c.G151C:p.E51Q	exonic	ENSG00000187569	NA	nonsynonymous SNV	ENSG00000187569:ENST00000345088:exon2:c.G151C:p.E51Q	NA	NA	12p13.31	NA	NA	NA	NA	rs2024320	0.24	0.24	0.195	0.217851	0.3121	0.1845	0.2349	0.1884	0.183	0.32	0.19	0.24	0.2	0.2774	0.32	0.1	T	0.0	B	0.001	B	.	.	1.000	P	0.55	N	0.88	T	-1.005	T	0.000	T	0.041	-0.368	2.265	-4.95	-2.785	-2.670	8.051	-0.368323	NA	0.11	0.306744	0.214026	NA	0.196	NA	9.4370894
708	5	145442203	145442203	G	C	exonic	SH3RF2	NA	nonsynonymous SNV	SH3RF2:NM_152550:exon10:c.G2129C:p.G710A	exonic	ENSG00000156463	NA	nonsynonymous SNV	ENSG00000156463:ENST00000511217:exon9:c.G2129C:p.G710A,ENSG00000156463:ENST00000359120:exon10:c.G2129C:p.G710A	Score=251;Name=lod=14	NA	5q32	NA	NA	NA	NA	rs1056149	0.63	0.63	0.614	0.630192	0.6481	0.7212	0.5937	0.4561	0.7791	0.67	0.71	0.62	0.5	0.6263	0.71	0.86	T	0.004	B	0.005	B	0.648	N	0.923	P	0.145	N	2.36	T	-1.006	T	0.000	T	0.072	0.713	7.796	3.5	1.248	2.639	12.229	0.712587	NA	0.55	0.622209	0.475261	NA	0.551	NA	9.4367244
708	6	30864829	30864829	T	C	exonic	DDR1	NA	synonymous SNV	DDR1:NM_001202522:exon11:c.T1470C:p.V490V,DDR1:NM_001202523:exon13:c.T1851C:p.V617V,DDR1:NM_013994:exon13:c.T1908C:p.V636V,DDR1:NM_001954:exon15:c.T1797C:p.V599V,DDR1:NM_013993:exon15:c.T1908C:p.V636V	exonic	ENSG00000204580	NA	synonymous SNV	ENSG00000204580:ENST00000361741:exon9:c.T909C:p.V303V,ENSG00000204580:ENST00000417521:exon9:c.T1104C:p.V368V,ENSG00000204580:ENST00000376567:exon12:c.T1797C:p.V599V,ENSG00000204580:ENST00000418800:exon13:c.T1797C:p.V599V,ENSG00000204580:ENST00000508312:exon13:c.T1851C:p.V617V,ENSG00000204580:ENST00000513240:exon13:c.T1908C:p.V636V,ENSG00000204580:ENST00000376568:exon14:c.T1908C:p.V636V,ENSG00000204580:ENST00000376569:exon14:c.T1797C:p.V599V,ENSG00000204580:ENST00000376570:exon15:c.T1797C:p.V599V,ENSG00000204580:ENST00000452441:exon15:c.T1908C:p.V636V,ENSG00000204580:ENST00000324771:exon16:c.T1908C:p.V636V,ENSG00000204580:ENST00000376575:exon16:c.T1908C:p.V636V,ENSG00000204580:ENST00000454612:exon17:c.T1797C:p.V599V	Score=517;Name=lod=168	NA	6p21.33	NA	NA	Name=2	NA	rs1049623	0.51	0.51	0.505	0.535743	0.3847	0.6667	0.5245	0.4531	0.6759	0.42	0.61	0.52	0.51	0.4631	0.61	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	1.344	10.41	5.29	1.250	0.586	7.79	1.343892	1.343892	NA	0.382209	0.455742	ID=COSM1178502,COSM1178504,COSM1178503;OCCURENCE=1(prostate)	0.493	NA	9.4366576
708	22	41075543	41075543	A	G	exonic	MCHR1	NA	nonsynonymous SNV	MCHR1:NM_005297:exon1:c.A94G:p.N32D	exonic	ENSG00000128285	NA	nonsynonymous SNV	ENSG00000128285:ENST00000249016:exon1:c.A94G:p.N32D,ENSG00000128285:ENST00000381433:exon1:c.A94G:p.N32D	NA	NA	22q13.2	NA	Name=Egr-1	Name=20	NA	rs133072	0.71	0.71	0.722	0.667732	0.6352	0.9802	0.4207	0.7209	0.4826	0.62	0.99	0.44	0.73	0.626	0.99	1	T	0.0	B	0.0	B	0.013	N	1.000	P	0	N	0.56	T	-0.939	T	0.000	T	0.111	-0.387	2.184	2.02	0.487	2.486	5.505	-0.386845	NA	0.98	0.636078	0.690282	NA	0.601	NA	9.4360554
708	20	3675498	3675498	T	G	exonic	SIGLEC1	NA	nonsynonymous SNV	SIGLEC1:NM_023068:exon11:c.A2756C:p.H919P	exonic	ENSG00000088827	NA	nonsynonymous SNV	ENSG00000088827:ENST00000202578:exon11:c.A2756C:p.H919P,ENSG00000088827:ENST00000344754:exon11:c.A2756C:p.H919P	Score=407;Name=lod=60	NA	20p13	NA	NA	NA	NA	rs709012	0.71	0.71	0.688	0.741414	0.5984	0.869	0.6715	0.7995	0.728	0.61	0.85	0.63	0.77	0.6838	0.85	1	T	0.0	B	0.0	B	0.001	N	1.000	P	-0.905	N	2.82	T	-0.993	T	0.000	T	0.096	-0.14	3.313	4.79	1.269	3.709	12.336	-0.140367	NA	1	0.615465	0.766228	NA	0.761	NA	9.4356684
709	5	74324548	74324548	G	A	exonic	GCNT4	NA	nonsynonymous SNV	GCNT4:NM_016591:exon1:c.C1315T:p.P439S	exonic	ENSG00000176928	NA	nonsynonymous SNV	ENSG00000176928:ENST00000322348:exon1:c.C1315T:p.P439S	Score=381;Name=lod=47	NA	5q13.3	NA	NA	NA	NA	rs3811987	0.4	0.4	0.413	0.436701	0.3002	0.2897	0.3732	0.7504	0.3497	0.31	0.28	0.34	0.74	0.3266	0.74	0.8	T	0.0	B	0.0	B	0.001	N	0.994	P	-0.805	N	3.27	T	-1.034	T	0.000	T	0.113	-0.611	1.278	4.79	0.497	3.881	10.670	-0.611098	NA	1	0.271628	0.669542	ID=COSM149851;OCCURENCE=1(stomach)	0.435	NA	9.4349054
709	5	167891830	167891830	T	C	exonic	WWC1	NA	synonymous SNV	WWC1:NM_001161661:exon21:c.T3031C:p.L1011L,WWC1:NM_001161662:exon21:c.T3031C:p.L1011L,WWC1:NM_015238:exon21:c.T3013C:p.L1005L	exonic	ENSG00000113645	NA	synonymous SNV	ENSG00000113645:ENST00000524038:exon8:c.T1009C:p.L337L,ENSG00000113645:ENST00000265293:exon21:c.T3013C:p.L1005L,ENSG00000113645:ENST00000521089:exon21:c.T3031C:p.L1011L	Score=525;Name=lod=182	NA	5q34	NA	NA	NA	NA	rs3203960	0.32	0.32	0.32	0.339058	0.4463	0.0407	0.3329	0.4009	0.4571	0.46	0.03	0.36	0.4	0.3693	0.46	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.935	T	0.000	T	.	0.437	6.375	5.14	1.189	1.673	13.906	0.437319	NA	NA	0.416395	0.393554	NA	0.391	NA	9.4346716
709	19	14758168	14758168	G	A	exonic	EMR3	NA	nonsynonymous SNV	EMR3:NM_032571:exon8:c.C707T:p.A236V	exonic	ENSG00000131355	NA	nonsynonymous SNV	ENSG00000131355:ENST00000443157:exon5:c.C329T:p.A110V,ENSG00000131355:ENST00000344373:exon7:c.C551T:p.A184V,ENSG00000131355:ENST00000599900:exon7:c.C62T:p.A21V,ENSG00000131355:ENST00000253673:exon8:c.C707T:p.A236V	NA	NA	19p13.12	NA	NA	NA	NA	rs34226397	0.3	0.3	0.316	0.298123	0.3091	0.2738	0.2104	0.3691	0.2781	0.29	0.25	0.24	0.4	0.2858	0.4	0.32	T	0.092	B	0.041	B	.	.	1.000	P	1.54	L	3.23	T	-0.955	T	0.000	T	0.237	-1.771	0.01	3.94	1.753	2.331	11.575	-1.771288	NA	0.77	0.305	0.369496	NA	0.312	NA	9.4334334
709	12	132401566	132401566	C	T	exonic	ULK1	NA	nonsynonymous SNV	ULK1:NM_003565:exon21:c.C2141T:p.P714L	exonic	ENSG00000177169	NA	nonsynonymous SNV	ENSG00000177169:ENST00000541761:exon2:c.C185T:p.P62L,ENSG00000177169:ENST00000321867:exon21:c.C2141T:p.P714L	NA	NA	12q24.33	NA	NA	NA	NA	rs11546871	0.19	0.19	0.185	0.203674	0.326	0.0377	0.2651	0.0877	0.362	0.31	0.03	0.3	0.09	0.2652	0.31	0.67	T	0.007	B	0.002	B	0.575	N	0.808	P	0	N	1.61	T	-0.948	T	0.000	T	0.113	0.532	6.883	4.16	1.226	2.192	9.041	0.532418	NA	0.32	0.30979	0.102465	ID=COSM330256;OCCURENCE=1(breast),1(haematopoietic_and_lymphoid_tissue)	0.123	NA	9.4323434
709	1	20501582	20501582	G	A	exonic	PLA2G2C	NA	stopgain	PLA2G2C:NM_001105572:exon1:c.C106T:p.R36X	exonic	ENSG00000187980	NA	stopgain	ENSG00000187980:ENST00000247992:exon1:c.C106T:p.R36X,ENSG00000187980:ENST00000429261:exon2:c.C97T:p.R33X	NA	NA	1p36.12	Score=907;Name=V$USF_Q6	NA	Name=5	NA	rs12139100	0.18	0.18	0.196	0.240216	0.1839	0.1766	0.121	0.2829	0.3906	0.19	0.16	0.12	0.24	0.2095	0.25	0.38	T	.	.	.	.	0.051	N	0.000	P	.	.	.	.	.	.	.	.	.	3.616	18.4	-0.89	-0.055	0.198	4.751	3.615689	3.615689	NA	0.17597	0.250384	NA	0.152	NA	9.43063
709	2	95947099	95947099	G	A	exonic	PROM2	NA	nonsynonymous SNV	PROM2:NM_001165977:exon12:c.G1537A:p.G513S,PROM2:NM_001165978:exon12:c.G1537A:p.G513S,PROM2:NM_144707:exon12:c.G1537A:p.G513S	exonic	ENSG00000155066	NA	nonsynonymous SNV	ENSG00000155066:ENST00000317620:exon12:c.G1537A:p.G513S,ENSG00000155066:ENST00000317668:exon12:c.G1537A:p.G513S,ENSG00000155066:ENST00000403131:exon12:c.G1537A:p.G513S,ENSG00000155066:ENST00000542147:exon12:c.G1537A:p.G513S	NA	NA	2q11.1	NA	NA	NA	NA	rs72819488	0.12	0.12	0.102	0.100639	0.1382	0.2004	0.0879	0.003	0.1002	0.15	0.2	0.07	0.0041	0.1238	0.2	0.69	T	0.984	D	0.684	P	0.511	N	1.000	P	2.095	M	1.0	T	-1.053	T	0.000	T	0.21	1.869	12.21	1.65	0.357	0.897	4.444	1.869411	1.869411	0.13	0.141279	0.028597	NA	0.08	NA	9.4300544
709	20	55949894	55949894	C	G	ncRNA_intronic	MIR5095	NA	NA	NA	exonic	ENSG00000101146	NA	nonsynonymous SNV	ENSG00000101146:ENST00000527947:exon11:c.C1057G:p.Q353E	NA	NA	20q13.31	NA	Name=Max	Name=11	NA	rs41304419	0.03	0.03	0.024	0.0325479	0.0219	0.001	0.0144	0.084	0.0194	0.02	NA	0.02	0.08	0.027	0.087	.	.	0.006	B	0.005	B	.	.	1.000	N	.	.	-0.06	T	-1.106	T	0.005	T	0.044	0.225	5.217	-0.768	-0.133	-3.206	4.300	0.225499	NA	NA	0.022442	0.086927	NA	0.087	NA	9.428658
709	14	56146357	56146357	G	A	exonic	KTN1	NA	synonymous SNV	KTN1:NM_004986:exon41:c.G3852A:p.A1284A,KTN1:NM_001079522:exon42:c.G3870A:p.A1290A,KTN1:NM_001079521:exon43:c.G4023A:p.A1341A,KTN1:NM_001271014:exon43:c.G3939A:p.A1313A	exonic	ENSG00000126777	NA	synonymous SNV	ENSG00000126777:ENST00000555573:exon11:c.G954A:p.A318A,ENSG00000126777:ENST00000554507:exon24:c.G1737A:p.A579A,ENSG00000126777:ENST00000395311:exon41:c.G3870A:p.A1290A,ENSG00000126777:ENST00000413890:exon41:c.G3870A:p.A1290A,ENSG00000126777:ENST00000438792:exon41:c.G3852A:p.A1284A,ENSG00000126777:ENST00000395308:exon42:c.G3870A:p.A1290A,ENSG00000126777:ENST00000416613:exon42:c.G4023A:p.A1341A,ENSG00000126777:ENST00000395309:exon43:c.G4023A:p.A1341A,ENSG00000126777:ENST00000395314:exon43:c.G4023A:p.A1341A,ENSG00000126777:ENST00000459737:exon44:c.G4023A:p.A1341A	NA	NA	14q22.3	Score=877;Name=V$FREAC3_01	NA	NA	NA	rs11546	0.05	0.05	0.045	0.0625	0.0626	0.0159	0.0749	0.053	0.1145	0.07	0.01	0.07	0.06	0.0775	0.098	.	.	.	.	.	.	.	.	1.000	D	.	.	.	.	-1.038	T	0.004	T	.	0.396	6.153	-2.35	-0.584	-0.219	0.509	0.396415	NA	NA	0.098256	0.062869	NA	0.022	NA	9.4283106
709	1	110201812	110201812	A	G	intronic	GSTM4	NA	NA	NA	exonic	ENSG00000168765	NA	nonsynonymous SNV	ENSG00000168765:ENST00000369833:exon5:c.A524G:p.Y175C	NA	NA	1p13.3	NA	Name=c-Jun,p300_(N-15)	Name=21	NA	rs563003	0.9	0.9	0.902	0.874002	0.8598	0.9692	0.8963	0.8177	0.8507	0.88	0.96	0.89	0.86	0.88	0.96	.	.	.	.	.	.	.	.	1.000	P	.	.	3.47	T	-0.923	T	0.004	T	0.019	1.081	9.412	-4.98	-1.127	-2.260	5.024	1.080692	NA	0.23	NA	NA	NA	0.768	NA	9.4268667
710	2	239237953	239237953	G	T	exonic	TRAF3IP1	NA	nonsynonymous SNV	TRAF3IP1:NM_001139490:exon5:c.G885T:p.K295N,TRAF3IP1:NM_015650:exon5:c.G885T:p.K295N	exonic	ENSG00000204104	NA	nonsynonymous SNV	ENSG00000204104:ENST00000373327:exon5:c.G885T:p.K295N,ENSG00000204104:ENST00000391993:exon5:c.G885T:p.K295N,ENSG00000204104:ENST00000391994:exon5:c.G885T:p.K295N	Score=251;Name=lod=14	NA	2q37.3	NA	NA	NA	NA	rs12464423	0.24	0.24	0.22	0.205072	0.3012	0.2351	0.3516	0.0219	0.2188	0.32	0.24	0.34	0.04	0.2893	0.34	0.11	T	0.904	P	0.625	P	0.336	N	0.086	P	1.735	L	2.09	T	-0.946	T	0.000	T	0.042	1.206	9.896	2.52	0.395	0.808	8.217	1.20553	NA	0.02	0.320154	0.067045	NA	0.159	NA	9.4226794
710	11	6891704	6891704	T	C	exonic	OR10A2	NA	nonsynonymous SNV	OR10A2:NM_001004460:exon1:c.T719C:p.I240T	exonic	ENSG00000170790	NA	nonsynonymous SNV	ENSG00000170790:ENST00000307322:exon1:c.T719C:p.I240T	Score=385;Name=lod=49	NA	11p15.4	Score=763;Name=V$PAX6_01	NA	NA	NA	rs10839632	0.3	0.3	0.266	0.310903	0.325	0.4067	0.2882	0.205	0.3569	0.33	0.36	0.28	0.19	0.3019	0.36	0	D	0.0	B	0.002	B	0.015	N	1.000	P	-0.215	N	1.17	T	-0.946	T	0.000	T	0.049	-0.054	3.738	1.6	0.754	0.050	9.393	-0.054205	NA	0.03	0.284916	0.236483	NA	0.297	NA	9.4215174
710	6	31110391	31110391	G	C	exonic	CCHCR1	NA	nonsynonymous SNV	CCHCR1:NM_001105563:exon18:c.C2486G:p.S829C,CCHCR1:NM_001105564:exon18:c.C2594G:p.S865C,CCHCR1:NM_019052:exon18:c.C2327G:p.S776C	exonic	ENSG00000204536	NA	nonsynonymous SNV	ENSG00000204536:ENST00000396263:exon16:c.C2168G:p.S723C,ENSG00000204536:ENST00000376266:exon18:c.C2327G:p.S776C,ENSG00000204536:ENST00000396268:exon18:c.C2594G:p.S865C,ENSG00000204536:ENST00000451521:exon18:c.C2486G:p.S829C	NA	NA	6p21.33	NA	NA	Name=7	NA	rs1576	0.24	0.24	0.254	0.223043	0.3141	0.0724	0.2767	0.2315	0.2352	0.33	0.09	0.29	0.25	0.2752	0.33	0.18	T	0.0	B	0.001	B	0.001	N	1.000	P	1.61	L	3.83	T	-0.917	T	0.004	T	0.075	0.802	8.219	-5.36	-0.977	-0.312	7.497	0.802047	NA	0.14	0.322791	0.248298	NA	0.254	NA	9.4212424
710	22	32586854	32586854	C	T	exonic	RFPL2	NA	nonsynonymous SNV	RFPL2:NM_006605:exon2:c.G859A:p.V287I,RFPL2:NM_001159545:exon4:c.G772A:p.V258I,RFPL2:NM_001159546:exon4:c.G772A:p.V258I,RFPL2:NM_001098527:exon5:c.G1042A:p.V348I	exonic	ENSG00000128253	NA	nonsynonymous SNV	ENSG00000128253:ENST00000248980:exon2:c.G859A:p.V287I,ENSG00000128253:ENST00000248983:exon4:c.G772A:p.V258I,ENSG00000128253:ENST00000400236:exon5:c.G772A:p.V258I,ENSG00000128253:ENST00000400237:exon5:c.G1042A:p.V348I	NA	NA	22q12.3	NA	NA	NA	NA	rs136467	0.4	0.4	0.42	0.471845	0.4911	0.1488	0.3775	0.8207	0.3804	0.43	0.11	0.33	0.72	0.422	0.72	0.41	T	0.0	B	0.003	B	.	.	1.000	P	0.04	N	-0.37	T	-0.963	T	0.000	T	0.133	-1.98	0.007	-2.48	-3.030	-1.822	1.045	-1.979568	NA	0.29	NA	NA	NA	0.457	NA	9.4202334
710	5	81572184	81572184	G	C	intronic	RPS23	NA	NA	NA	exonic	ENSG00000186468	NA	nonsynonymous SNV	ENSG00000186468:ENST00000507980:exon3:c.C318G:p.F106L	NA	NA	5q14.2	NA	Name=HEY1	NA	NA	rs226200	0.58	0.58	0.563	0.554513	0.5775	0.8968	0.6671	0.1157	0.6912	0.58	0.92	0.65	0.14	0.5992	0.92	0	D	.	.	.	.	.	.	1.000	P	.	.	.	.	-1.022	T	0.000	T	0.098	1.434	10.74	-6.71	-1.253	-1.221	6.730	1.434239	1.434239	NA	0.570961	0.169597	NA	0.543	NA	9.4190057
710	12	7023123	7023123	A	G	exonic	LRRC23	NA	nonsynonymous SNV	LRRC23:NM_006992:exon7:c.A827G:p.E276G	exonic	ENSG00000010626	NA	nonsynonymous SNV	ENSG00000010626:ENST00000429740:exon4:c.A559G:p.N187D,ENSG00000010626:ENST00000323702:exon7:c.A827G:p.E276G	NA	NA	12p13.31	NA	Name=TBP,HEY1,FOXA1_(C-20),p300,FOXA1_(SC-101058),FOXA2_(SC-6554),TCF4,Pol2	Name=5	NA	rs710415	0.45	0.45	0.48	0.477835	0.2972	0.4732	0.2896	0.8169	0.3436	0.29	0.44	0.35	0.78	0.3337	0.78	0.01	D	0.0	B	0.0	B	.	.	1.000	P	.	.	1.17	T	-1.024	T	0.000	T	0.068	1.347	10.42	-0.778	-0.503	-0.005	3.692	1.346628	1.346628	0.16	0.283837	0.70699	NA	0.478	NA	9.4185964
710	3	124731485	124731485	C	G	exonic	HEG1	NA	nonsynonymous SNV	HEG1:NM_020733:exon6:c.G2938C:p.V980L	exonic	ENSG00000173706	NA	nonsynonymous SNV	ENSG00000173706:ENST00000311127:exon6:c.G2938C:p.V980L	NA	NA	3q21.2	NA	NA	NA	NA	rs10804567	0.73	0.73	0.7	0.746206	0.6262	0.9286	0.7363	0.6596	0.8057	0.65	0.92	0.68	0.65	0.6847	0.92	0.97	T	0.0	B	0.0	B	0.429	N	1.000	P	-2.015	N	-2.24	D	-0.957	T	0.000	T	0.041	-1.056	0.188	-9.01	-2.011	-1.876	4.606	-1.056212	NA	0.65	0.603942	0.666352	NA	0.58	NA	9.4184914
710	5	56209735	56209735	A	G	exonic	SETD9	NA	nonsynonymous SNV	SETD9:NM_001171990:exon4:c.A625G:p.K209E,SETD9:NM_153706:exon4:c.A625G:p.K209E	exonic	ENSG00000155542	NA	nonsynonymous SNV	ENSG00000155542:ENST00000285947:exon4:c.A625G:p.K209E,ENSG00000155542:ENST00000541720:exon4:c.A625G:p.K209E	Score=552;Name=lod=233	NA	5q11.2	NA	NA	NA	NA	rs40497	0.17	0.17	0.168	0.142772	0.335	0.0308	0.1772	0.0794	0.1217	0.32	0.03	0.2	0.08	0.2417	0.34	0.79	T	0.105	B	0.009	B	0.003	N	1.000	P	1.87	L	1.49	T	-0.967	T	0.000	T	0.063	2.227	13.4	3.33	1.008	0.552	7.101	2.227366	2.227366	0.78	0.338256	0.120064	NA	0.13	NA	9.4183774
710	22	31491295	31491295	G	C	exonic	SMTN	NA	nonsynonymous SNV	SMTN:NM_001207018:exon11:c.G1807C:p.A603P,SMTN:NM_006932:exon12:c.G1639C:p.A547P,SMTN:NM_134269:exon12:c.G1639C:p.A547P,SMTN:NM_134270:exon12:c.G1639C:p.A547P,SMTN:NM_001207017:exon13:c.G1894C:p.A632P	exonic	ENSG00000183963	NA	nonsynonymous SNV	ENSG00000183963:ENST00000404574:exon2:c.G436C:p.A146P,ENSG00000183963:ENST00000455608:exon2:c.G70C:p.A24P,ENSG00000183963:ENST00000333137:exon12:c.G1639C:p.A547P,ENSG00000183963:ENST00000347557:exon12:c.G1639C:p.A547P,ENSG00000183963:ENST00000358743:exon12:c.G1639C:p.A547P	Score=385;Name=lod=49	NA	22q12.2	NA	NA	NA	NA	rs3205187	0.48	0.48	0.484	0.491613	0.672	0.123	0.5159	0.5159	0.636	0.67	0.1	0.56	0.54	0.5816	0.67	1	T	0.0	B	0.002	B	0.002	N	0.000	P	-0.895	N	1.94	T	-0.975	T	0.000	T	0.1	-0.47	1.831	3.9	1.495	1.084	11.344	-0.469884	NA	1	0.663605	0.497049	NA	0.543	NA	9.4161284
711	8	27903069	27903069	C	T	exonic	NUGGC	NA	nonsynonymous SNV	NUGGC:NM_001010906:exon12:c.G1421A:p.S474N	exonic	ENSG00000189233	NA	nonsynonymous SNV	ENSG00000189233:ENST00000341513:exon12:c.G1421A:p.S474N,ENSG00000189233:ENST00000413272:exon12:c.G1421A:p.S474N	Score=414;Name=lod=64	NA	8p21.1	NA	NA	NA	NA	rs13279787	0.38	0.38	0.355	0.378195	0.2972	0.4375	0.4092	0.4304	0.3078	0.3	0.45	0.37	0.44	0.3412	0.45	0.39	T	0.001	B	0.001	B	0.005	N	0.990	P	0.345	N	1.49	T	-0.901	T	0.000	T	0.002	0.616	7.315	2.29	1.181	0.340	6.573	0.615758	NA	0.17	0.281197	0.378898	NA	0.391	NA	9.4137364
711	5	153413390	153413390	C	T	exonic	FAM114A2	NA	nonsynonymous SNV	FAM114A2:NM_018691:exon4:c.G364A:p.G122S	exonic	ENSG00000055147	NA	nonsynonymous SNV	ENSG00000055147:ENST00000520313:exon3:c.G154A:p.G52S,ENSG00000055147:ENST00000351797:exon4:c.G364A:p.G122S,ENSG00000055147:ENST00000522395:exon4:c.G364A:p.G122S,ENSG00000055147:ENST00000522858:exon4:c.G364A:p.G122S,ENSG00000055147:ENST00000523705:exon4:c.G364A:p.G122S,ENSG00000055147:ENST00000519808:exon5:c.G364A:p.G122S,ENSG00000055147:ENST00000520667:exon5:c.G364A:p.G122S	Score=598;Name=lod=358	NA	5q33.2	NA	NA	NA	NA	rs2578377	0.71	0.71	0.692	0.716254	0.6262	0.8581	0.7161	0.6256	0.7853	0.64	0.87	0.67	0.64	0.6749	0.87	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-1.625	N	1.22	T	-0.958	T	0.000	T	0.265	1.547	11.13	5.93	1.074	5.922	12.161	1.547196	1.547196	1	0.623052	0.648888	NA	0.674	NA	9.4091814
711	17	1673276	1673276	C	T	exonic	SERPINF1	NA	nonsynonymous SNV	SERPINF1:NM_002615:exon3:c.C215T:p.T72M	exonic	ENSG00000132386	NA	nonsynonymous SNV	ENSG00000132386:ENST00000254722:exon3:c.C215T:p.T72M,ENSG00000132386:ENST00000570731:exon3:c.C215T:p.T72M,ENSG00000132386:ENST00000571149:exon3:c.C215T:p.T72M,ENSG00000132386:ENST00000571360:exon3:c.C176T:p.T59M,ENSG00000132386:ENST00000573770:exon3:c.C215T:p.T72M,ENSG00000132386:ENST00000577053:exon3:c.C215T:p.T72M	NA	NA	17p13.3	NA	Name=ZNF263	Name=42	NA	rs1136287	0.65	0.65	0.688	0.626198	0.6541	0.4871	0.5893	0.8759	0.4294	0.63	0.5	0.62	0.86	0.6188	0.86	0.18	T	0.005	B	0.006	B	0.000	N	1.000	P	0.805	L	-1.87	D	-0.955	T	0.000	T	0.283	1.046	9.272	-11.3	-2.772	-0.750	5.207	1.045905	NA	0.1	0.65186	0.82887	ID=COSM1381146;OCCURENCE=1(large_intestine)	0.71	NA	9.4085734
711	14	94933473	94933473	C	A	exonic	SERPINA9	NA	nonsynonymous SNV	SERPINA9:NM_175739:exon3:c.G929T:p.R310I,SERPINA9:NM_001042518:exon4:c.G629T:p.R210I	exonic	ENSG00000170054	NA	nonsynonymous SNV	ENSG00000170054:ENST00000337425:exon3:c.G929T:p.R310I,ENSG00000170054:ENST00000380365:exon3:c.G875T:p.R292I,ENSG00000170054:ENST00000448305:exon3:c.G635T:p.R212I,ENSG00000170054:ENST00000546329:exon3:c.G821T:p.R274I,ENSG00000170054:ENST00000298845:exon4:c.G629T:p.R210I,ENSG00000170054:ENST00000424550:exon4:c.G482T:p.R161I	NA	NA	14q32.13	Score=901;Name=V$ZID_01	NA	NA	NA	rs28618118	0.33	0.33	0.296	0.322284	0.3101	0.4643	0.3847	0.1452	0.3834	0.32	0.48	0.35	0.16	0.3146	0.48	0.4	T	0.03	B	0.02	B	0.007	N	1.000	P	1.125	L	-1.87	D	-0.973	T	0.000	T	0.099	1.779	11.91	2.57	0.790	-0.880	9.319	1.778992	1.778992	0.02	0.300406	0.160732	NA	0.268	NA	9.4082274
711	8	144895669	144895669	G	A	exonic	SCRIB	NA	synonymous SNV	SCRIB:NM_015356:exon5:c.C474T:p.L158L,SCRIB:NM_182706:exon5:c.C474T:p.L158L	exonic	ENSG00000180900	NA	synonymous SNV	ENSG00000180900:ENST00000320476:exon5:c.C474T:p.L158L,ENSG00000180900:ENST00000356994:exon5:c.C474T:p.L158L,ENSG00000180900:ENST00000377533:exon5:c.C231T:p.L77L	Score=558;Name=lod=246	NA	8q24.3	Score=872;Name=V$COUP_01	Name=c-Myc	Name=6	NA	rs56748182	0.05	0.05	0.049	0.0411342	0.0994	0.0248	0.0504	0.0106	0.0327	0.1	0.02	0.07	0.01	0.0702	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.750709	1.750709	NA	0.091047	0.023377	NA	0.058	NA	9.4060196
711	8	144917880	144917880	G	A	exonic	NRBP2	NA	synonymous SNV	NRBP2:NM_178564:exon18:c.C1458T:p.A486A	exonic	ENSG00000185189	NA	synonymous SNV	ENSG00000185189:ENST00000327830:exon17:c.C729T:p.A243A,ENSG00000185189:ENST00000442628:exon18:c.C1458T:p.A486A	NA	NA	8q24.3	NA	NA	NA	NA	rs72693365	0.05	0.05	0.042	0.0425319	0.0944	0.0109	0.0504	0.0106	0.0593	0.09	0.01	0.07	0.01	0.0745	0.092	.	.	.	.	.	.	.	.	0.002	P	.	.	.	.	-1.030	T	0.002	T	.	1.684	11.59	-5.0	-1.097	-2.313	2.289	1.684044	1.684044	NA	0.091998	0.023398	NA	0.051	NA	9.4057686
712	4	1730299	1730299	A	G	exonic	TACC3	NA	synonymous SNV	TACC3:NM_006342:exon4:c.A1170G:p.A390A	exonic	ENSG00000013810	NA	synonymous SNV	ENSG00000013810:ENST00000313288:exon4:c.A1170G:p.A390A	NA	NA	4p16.3	NA	Name=HA-E2F1	NA	NA	rs798759	0.32	0.32	0.308	0.30631	0.4394	0.1597	0.3184	0.3245	0.2873	0.44	0.18	0.32	0.29	0.3737	0.45	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.948	T	0.000	T	.	0.129	4.696	-4.59	-1.208	-1.073	7.277	0.129352	NA	NA	0.450698	0.354517	NA	0.428	NA	9.4028686
712	14	39777676	39777676	G	C	exonic	CTAGE5	NA	nonsynonymous SNV	CTAGE5:NM_001247988:exon13:c.G991C:p.E331Q,CTAGE5:NM_001247989:exon13:c.G1093C:p.E365Q,CTAGE5:NM_001247990:exon13:c.G853C:p.E285Q,CTAGE5:NM_005930:exon13:c.G1078C:p.E360Q,CTAGE5:NM_203354:exon13:c.G1042C:p.E348Q,CTAGE5:NM_203355:exon13:c.G1078C:p.E360Q,CTAGE5:NM_203356:exon13:c.G991C:p.E331Q	exonic	ENSG00000150527,ENSG00000258941	NA	nonsynonymous SNV	ENSG00000150527:ENST00000553352:exon12:c.G991C:p.E331Q,ENSG00000150527:ENST00000557038:exon12:c.G838C:p.E280Q,ENSG00000150527:ENST00000280083:exon13:c.G1078C:p.E360Q,ENSG00000150527:ENST00000341502:exon13:c.G1078C:p.E360Q,ENSG00000150527:ENST00000341749:exon13:c.G1042C:p.E348Q,ENSG00000150527:ENST00000348007:exon13:c.G1078C:p.E360Q,ENSG00000150527:ENST00000396158:exon13:c.G1093C:p.E365Q,ENSG00000150527:ENST00000396165:exon13:c.G991C:p.E331Q,ENSG00000150527:ENST00000556148:exon13:c.G853C:p.E285Q,ENSG00000258941:ENST00000603904:exon13:c.G991C:p.E331Q,ENSG00000258941:ENST00000553728:exon17:c.G2683C:p.E895Q	Score=243;Name=lod=13	NA	14q21.1	NA	NA	NA	NA	rs1950952	0.54	0.54	0.507	0.535942	0.6511	0.4177	0.5605	0.4387	0.6534	0.65	0.44	0.59	0.44	0.6187	0.66	.	.	0.154	B	0.139	B	.	.	0.998	P	1.615	L	2.27	T	-0.900	T	0.000	T	0.074	2.15	13.15	4.5	1.266	2.215	8.212	2.150357	2.150357	0.48	0.661716	0.469473	NA	0.601	NA	9.4018174
712	1	110279701	110279701	C	T	exonic	GSTM3	NA	nonsynonymous SNV	GSTM3:NM_000849:exon9:c.G670A:p.V224I	exonic	ENSG00000134202	NA	nonsynonymous SNV	ENSG00000134202:ENST00000256594:exon8:c.G670A:p.V224I,ENSG00000134202:ENST00000361066:exon9:c.G670A:p.V224I,ENSG00000134202:ENST00000540225:exon9:c.G670A:p.V224I	NA	NA	1p13.3	NA	Name=CTCF	NA	NA	rs7483	0.38	0.38	0.345	0.360623	0.2962	0.7252	0.4035	0.0628	0.4233	0.31	0.73	0.36	0.09	0.3415	0.73	1	T	0.0	B	0.0	B	0.632	N	1.000	P	-0.69	N	4.94	T	-0.926	T	0.000	T	0.095	-1.711	0.011	-5.25	-0.786	-1.859	1.767	-1.711288	NA	1	0.296512	0.111893	NA	0.304	NA	9.3991214
712	6	31378425	31378425	A	G	exonic	MICA	NA	nonsynonymous SNV	MICA:NM_000247:exon2:c.A176G:p.Y59C,MICA:NM_001177519:exon2:c.A176G:p.Y59C	exonic	ENSG00000204520	NA	nonsynonymous SNV	ENSG00000204520:ENST00000421350:exon2:c.A137G:p.Y46C,ENSG00000204520:ENST00000449934:exon2:c.A176G:p.Y59C	NA	NA	6p21.33	NA	NA	NA	NA	rs1051786	0.37	0.37	0.34	0.364816	0.3141	0.3006	0.4078	0.4788	0.2986	0.32	0.28	0.47	0.46	0.3314	0.47	0.22	T	0.078	B	0.054	B	0.870	N	1.000	P	.	.	3.86	T	-0.930	T	0.002	T	0.217	0.022	4.126	-5.5	-2.184	-3.180	3.654	0.021662	NA	0.22	0.288812	0.418353	NA	0.304	NA	9.3990214
712	10	102824349	102824349	G	C	exonic	KAZALD1	NA	nonsynonymous SNV	KAZALD1:NM_030929:exon4:c.G764C:p.G255A	exonic	ENSG00000107821	NA	nonsynonymous SNV	ENSG00000107821:ENST00000370200:exon4:c.G764C:p.G255A	Score=448;Name=lod=88	NA	10q24.31	NA	NA	NA	NA	rs807037	0.58	0.58	0.572	0.595647	0.6461	0.4921	0.549	0.6241	0.6452	0.65	0.44	0.59	0.63	0.6265	0.66	1	T	0.0	B	0.0	B	0.000	N	0.988	P	-2.155	N	0.6	T	-0.919	T	0.000	T	0.119	0.948	8.866	5.53	1.349	6.064	16.587	0.948041	NA	1	0.662442	0.631185	NA	0.529	NA	9.3982914
712	11	123894402	123894402	A	G	exonic	OR10G9	NA	nonsynonymous SNV	OR10G9:NM_001001953:exon1:c.A683G:p.H228R	exonic	ENSG00000236981	NA	nonsynonymous SNV	ENSG00000236981:ENST00000375024:exon1:c.A683G:p.H228R	Score=317;Name=lod=26	NA	11q24.1	NA	NA	NA	NA	rs12221656	0.28	0.28	0.227	0.325479	0.2922	0.505	0.4568	0.1664	0.2965	0.24	0.42	0.35	0.12	0.3337	0.42	1	T	0.0	B	0.0	B	0.231	N	1.000	P	-0.855	N	1.36	T	-0.924	T	0.000	T	0.102	-2.265	0.004	2.52	0.297	-1.055	3.881	-2.264974	NA	1	0.310537	0.194684	ID=COSM147361;OCCURENCE=1(stomach)	0.261	NA	9.3968964
712	9	94495608	94495608	T	C	exonic	ROR2	NA	nonsynonymous SNV	ROR2:NM_004560:exon6:c.A733G:p.T245A	exonic	ENSG00000169071	NA	nonsynonymous SNV	ENSG00000169071:ENST00000375708:exon6:c.A733G:p.T245A,ENSG00000169071:ENST00000375715:exon6:c.A313G:p.T105A	Score=668;Name=lod=692	NA	9q22.31	Score=845;Name=V$P300_01	NA	NA	NA	rs10820900	0.63	0.63	0.589	0.644968	0.659	0.5268	0.5159	0.7587	0.6902	0.66	0.51	0.53	0.78	0.6318	0.78	1	T	0.0	B	0.004	B	0.025	N	1.000	P	0.425	N	-0.89	T	-0.925	T	0.000	T	0.037	0.335	5.817	3.45	1.109	0.861	4.185	0.334936	NA	1	0.645814	0.743305	ID=COSM1569878;OCCURENCE=1(large_intestine)	0.478	NA	9.3967194
713	9	79946961	79946961	C	T	exonic	VPS13A	NA	synonymous SNV	VPS13A:NM_001018037:exon45:c.C5910T:p.Y1970Y,VPS13A:NM_001018038:exon46:c.C6027T:p.Y2009Y,VPS13A:NM_015186:exon46:c.C6027T:p.Y2009Y,VPS13A:NM_033305:exon46:c.C6027T:p.Y2009Y	exonic	ENSG00000197969	NA	synonymous SNV	ENSG00000197969:ENST00000376636:exon45:c.C5910T:p.Y1970Y,ENSG00000197969:ENST00000357409:exon46:c.C6027T:p.Y2009Y,ENSG00000197969:ENST00000360280:exon46:c.C6027T:p.Y2009Y,ENSG00000197969:ENST00000376634:exon46:c.C6027T:p.Y2009Y	Score=393;Name=lod=53	NA	9q21.2	Score=806;Name=V$IRF7_01	NA	NA	NA	rs17424026	0.08	0.08	0.083	0.0688898	0.0954	0.1091	0.0576	0.0325	0.0573	0.1	0.11	0.05	0.05	0.0872	0.11	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.036	T	0.004	T	.	0.686	7.668	1.82	0.150	1.220	9.604	0.686428	NA	NA	0.090951	0.054698	NA	0.036	NA	9.3931156
713	14	91925027	91925027	G	T	UTR3	SMEK1	NM_032560:c.*76C>A	NA	NA	UTR3	ENSG00000100796	ENST00000428424:c.*76C>A,ENST00000337238:c.*76C>A,ENST00000554684:c.*76C>A,ENST00000554943:c.*76C>A,ENST00000555462:c.*76C>A	NA	NA	Score=489;Name=lod=129	NA	14q32.12	NA	NA	Name=3	NA	rs10135595	0.48	0.48	0.452	0.460064	0.4712	0.4673	0.4481	0.4917	0.407	0.5	0.47	0.44	0.52	0.4699	0.52	0	D	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.901	T	0.000	T	.	0.679	7.633	4.08	0.802	2.196	8.703	0.679251	NA	NA	NA	NA	NA	0.442	NA	9.3922334
713	17	1456318	1456318	G	A	exonic	PITPNA	NA	synonymous SNV	PITPNA:NM_006224:exon3:c.C177T:p.H59H	exonic	ENSG00000174238	NA	synonymous SNV	ENSG00000174238:ENST00000313486:exon3:c.C177T:p.H59H,ENSG00000174238:ENST00000539476:exon3:c.C177T:p.H59H,ENSG00000174238:ENST00000573056:exon3:c.C243T:p.H81H,ENSG00000174238:ENST00000575288:exon3:c.C177T:p.H59H	Score=594;Name=lod=346	NA	17p13.3	Score=855;Name=V$FREAC3_01	Name=BATF	Name=5	NA	rs2230463	0.05	0.05	0.043	0.038738	0.0954	0.0069	0.0418	0.0189	0.0378	0.1	0.01	0.05	0.02	0.0754	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.226694	NA	NA	0.105712	0.028722	NA	0.051	NA	9.3901546
713	10	123996976	123996976	G	A	exonic	TACC2	NA	nonsynonymous SNV	TACC2:NM_206860:exon10:c.G2338A:p.A780T,TACC2:NM_006997:exon11:c.G2428A:p.A810T,TACC2:NM_206861:exon14:c.G2632A:p.A878T,TACC2:NM_206862:exon17:c.G8194A:p.A2732T	exonic	ENSG00000138162	NA	nonsynonymous SNV	ENSG00000138162:ENST00000496913:exon7:c.G1168A:p.A390T,ENSG00000138162:ENST00000360561:exon10:c.G2338A:p.A780T,ENSG00000138162:ENST00000369000:exon10:c.G1063A:p.A355T,ENSG00000138162:ENST00000260733:exon11:c.G2428A:p.A810T,ENSG00000138162:ENST00000369001:exon11:c.G1075A:p.A359T,ENSG00000138162:ENST00000369004:exon11:c.G2374A:p.A792T,ENSG00000138162:ENST00000368999:exon12:c.G2464A:p.A822T,ENSG00000138162:ENST00000358010:exon13:c.G2632A:p.A878T,ENSG00000138162:ENST00000453444:exon13:c.G7975A:p.A2659T,ENSG00000138162:ENST00000513429:exon14:c.G2632A:p.A878T,ENSG00000138162:ENST00000515273:exon14:c.G7975A:p.A2659T,ENSG00000138162:ENST00000515603:exon14:c.G7828A:p.A2610T,ENSG00000138162:ENST00000334433:exon16:c.G8194A:p.A2732T,ENSG00000138162:ENST00000369005:exon17:c.G8194A:p.A2732T	NA	NA	10q26.13	NA	NA	Name=4	NA	rs2295879	0.25	0.25	0.235	0.269169	0.339	0.2351	0.2925	0.1286	0.4059	0.35	0.23	0.26	0.13	0.3028	0.35	0.71	T	0.022	B	0.009	B	0.547	N	1.000	P	-0.345	N	4.11	T	-0.924	T	0.000	T	0.137	-0.105	3.486	-6.6	-1.413	-0.946	7.101	-0.104786	NA	0.73	0.302093	0.159101	NA	0.239	NA	9.3894404
713	14	20852817	20852817	G	A	exonic	TEP1	NA	nonsynonymous SNV	TEP1:NM_007110:exon22:c.C3163T:p.R1055C	exonic	ENSG00000129566	NA	nonsynonymous SNV	ENSG00000129566:ENST00000555008:exon10:c.C1213T:p.R405C,ENSG00000129566:ENST00000556935:exon20:c.C2839T:p.R947C,ENSG00000129566:ENST00000262715:exon22:c.C3163T:p.R1055C,ENSG00000129566:ENST00000555727:exon22:c.C3163T:p.R1055C	NA	NA	14q11.2	NA	NA	NA	NA	rs1760903	0.58	0.58	0.589	0.633387	0.4573	0.6121	0.5994	0.7837	0.6575	0.46	0.6	0.56	0.74	0.5323	0.74	0.06	T	0.987	D	0.555	P	0.435	N	1.000	P	1.5	L	2.18	T	-0.950	T	0.000	T	0.07	0.619	7.33	3.21	0.576	1.437	8.359	0.61875	NA	0.09	0.454651	0.738992	NA	0.551	NA	9.3890824
713	12	118509191	118509191	G	A	exonic	VSIG10	NA	nonsynonymous SNV	VSIG10:NM_019086:exon6:c.C1303T:p.H435Y	exonic	ENSG00000176834	NA	nonsynonymous SNV	ENSG00000176834:ENST00000359236:exon6:c.C1303T:p.H435Y	Score=329;Name=lod=29	NA	12q24.23	NA	NA	NA	NA	rs7307331	0.53	0.53	0.522	0.541933	0.2813	0.7808	0.5072	0.7337	0.3292	0.27	0.76	0.46	0.71	0.3774	0.76	0.88	T	0.0	B	0.0	B	0.002	N	1.000	P	-2.125	N	0.84	T	-0.956	T	0.000	T	0.06	-0.891	0.457	5.15	0.926	3.890	11.262	-0.890959	NA	1	0.287172	0.646919	NA	0.471	NA	9.3874614
713	16	22144318	22144318	C	T	exonic	VWA3A	NA	nonsynonymous SNV	VWA3A:NM_173615:exon20:c.C1970T:p.T657I	exonic	ENSG00000175267	NA	nonsynonymous SNV	ENSG00000175267:ENST00000563389:exon2:c.C116T:p.T39I,ENSG00000175267:ENST00000389398:exon20:c.C1970T:p.T657I,ENSG00000175267:ENST00000568328:exon21:c.C2033T:p.T678I	NA	NA	16p12.2	NA	NA	NA	NA	rs1105929	0.51	0.51	0.549	0.599042	0.2734	0.7788	0.353	0.8177	0.6278	0.28	0.74	0.33	0.75	0.4011	0.75	0.54	T	0.002	B	0.01	B	0.726	N	1.000	P	-0.41	N	1.91	T	-0.993	T	0.000	T	0.427	-0.913	0.412	-5.8	-1.309	-2.116	12.339	-0.91276	NA	0.58	0.271654	0.693117	NA	0.507	NA	9.3871794
713	8	22570935	22570935	T	C	exonic	PEBP4	NA	nonsynonymous SNV	PEBP4:NM_144962:exon7:c.A632G:p.E211G	exonic	ENSG00000134020	NA	nonsynonymous SNV	ENSG00000134020:ENST00000256404:exon7:c.A632G:p.E211G	NA	NA	8p21.3	NA	NA	NA	NA	rs1047406	0.32	0.32	0.265	0.286342	0.3231	0.2996	0.4582	0.2413	0.1738	0.32	0.29	0.43	0.26	0.3091	0.43	0.69	T	0.0	B	0.0	B	0.001	N	1.000	P	0	N	1.42	T	-0.981	T	0.000	T	0.02	-0.816	0.635	-8.31	-2.217	-3.186	0.224	-0.815731	NA	0.38	0.314636	0.264706	NA	0.246	NA	9.3864974
714	19	4236996	4236996	G	A	exonic	EBI3	NA	nonsynonymous SNV	EBI3:NM_005755:exon5:c.G601A:p.V201I	exonic	ENSG00000105246	NA	nonsynonymous SNV	ENSG00000105246:ENST00000221847:exon5:c.G601A:p.V201I	NA	NA	19p13.3	NA	NA	NA	NA	rs4740	0.41	0.41	0.407	0.448482	0.3052	0.4415	0.2738	0.6233	0.4908	0.31	0.44	0.28	0.6	0.3591	0.6	0.44	T	0.06	B	0.023	B	0.410	N	1.000	P	0.02	N	0.29	T	-1.000	T	0.000	T	0.087	-0.279	2.664	-8.95	-2.080	-1.447	20.474	-0.279141	NA	0.75	0.285581	0.583749	NA	0.399	NA	9.3834524
714	2	242716380	242716380	A	T	exonic	GAL3ST2	NA	nonsynonymous SNV	GAL3ST2:NM_022134:exon1:c.A10T:p.M4L	exonic	ENSG00000154252	NA	nonsynonymous SNV	ENSG00000154252:ENST00000192314:exon1:c.A10T:p.M4L	NA	NA	2q37.3	NA	NA	NA	NA	rs12469459	0.38	0.38	0.406	0.370407	0.3052	0.3978	0.2392	0.5416	0.271	0.3	0.4	0.27	0.56	0.3455	0.56	1	T	0.0	B	0.0	B	0.000	U	1.000	P	0	N	2.72	T	-0.929	T	0.000	T	0.059	-2.213	0.005	-3.88	-1.477	-2.059	0.425	-2.212774	NA	0.75	0.301	0.479573	NA	0.413	NA	9.3816334
714	21	46101939	46101939	C	T	exonic	KRTAP12-1	NA	nonsynonymous SNV	KRTAP12-1:NM_181686:exon1:c.G100A:p.V34M	exonic	ENSG00000187175	NA	nonsynonymous SNV	ENSG00000187175:ENST00000391617:exon1:c.G100A:p.V34M	NA	NA	21q22.3	NA	NA	NA	NA	rs9984476	0.11	0.11	0.094	0.123203	0.1461	0.0813	0.121	0.0946	0.183	0.15	0.08	0.12	0.08	0.1463	0.16	0	D	0.932	P	0.36	B	.	.	1.000	P	.	.	4.95	T	-0.877	T	0.000	T	0.029	1.458	10.82	-1.71	-0.476	-1.796	6.365	1.458239	1.458239	0.02	0.160426	0.087872	NA	0.058	NA	9.3805074
714	3	42728144	42728144	A	G	exonic	KLHL40	NA	nonsynonymous SNV	KLHL40:NM_152393:exon1:c.A1034G:p.N345S	exonic	ENSG00000157119	NA	nonsynonymous SNV	ENSG00000157119:ENST00000287777:exon1:c.A1034G:p.N345S	Score=581;Name=lod=305	NA	3p22.1	NA	NA	NA	NA	rs6805421	0.65	0.65	0.617	0.622604	0.672	0.8343	0.5922	0.3638	0.7249	0.67	0.8	0.63	0.43	0.6489	0.8	0.83	T	0.002	B	0.001	B	0.000	D	0.999	P	-0.55	N	-0.19	T	-0.958	T	0.000	T	0.004	0.527	6.854	3.24	0.518	1.917	11.030	0.526858	NA	0.22	0.634186	0.414889	ID=COSM149365;OCCURENCE=1(stomach),1(large_intestine)	0.486	NA	9.3782474
714	5	179290845	179290845	T	G	exonic	TBC1D9B	NA	nonsynonymous SNV	TBC1D9B:NM_015043:exon21:c.A3305C:p.K1102T,TBC1D9B:NM_198868:exon22:c.A3356C:p.K1119T	exonic	ENSG00000197226	NA	nonsynonymous SNV	ENSG00000197226:ENST00000444477:exon8:c.A779C:p.K260T,ENSG00000197226:ENST00000519746:exon8:c.A833C:p.K278T,ENSG00000197226:ENST00000355235:exon21:c.A3305C:p.K1102T,ENSG00000197226:ENST00000356834:exon22:c.A3356C:p.K1119T	NA	NA	5q35.3	NA	NA	NA	NA	rs30386	0.54	0.54	0.509	0.576478	0.4493	0.7748	0.67	0.4289	0.636	0.43	0.78	0.62	0.39	0.5467	0.78	0.27	T	0.734	P	0.203	B	0.007	N	1.000	P	1.5	L	1.0	T	-1.034	T	0.000	T	0.479	-0.643	1.164	5.37	2.027	1.367	11.382	-0.642875	NA	0.28	0.459419	0.459147	NA	0.507	NA	9.3779144
714	5	157164962	157164962	T	C	exonic	THG1L	NA	nonsynonymous SNV	THG1L:NM_017872:exon5:c.T695C:p.L232P	exonic	ENSG00000113272	NA	nonsynonymous SNV	ENSG00000113272:ENST00000231198:exon5:c.T695C:p.L232P	Score=605;Name=lod=382	NA	5q33.3	NA	NA	NA	NA	rs2270812	0.7	0.7	0.706	0.709065	0.6471	0.8125	0.5086	0.7738	0.7209	0.66	0.8	0.55	0.76	0.6611	0.8	1	T	0.0	B	0.0	B	0.000	N	0.013	P	-2.38	N	1.42	T	-0.951	T	0.000	T	0.544	0.53	6.87	5.58	1.503	4.779	15.078	0.529873	NA	1	0.647674	0.751021	NA	0.645	NA	9.3774594
714	11	123777736	123777736	T	C	exonic	OR8D4	NA	nonsynonymous SNV	OR8D4:NM_001005197:exon1:c.T598C:p.F200L	exonic	ENSG00000181518	NA	nonsynonymous SNV	ENSG00000181518:ENST00000321355:exon1:c.T598C:p.F200L	NA	NA	11q24.1	NA	NA	NA	NA	rs10790610	0.27	0.27	0.241	0.267772	0.3141	0.378	0.3271	0.0794	0.319	0.32	0.35	0.28	0.08	0.3102	0.35	0.56	T	0.025	B	0.05	B	0.000	D	0.982	P	0.58	N	8.84	T	-1.248	T	0.000	T	0.087	1.443	10.76	3.39	1.035	0.367	7.585	1.442552	1.442552	0.59	0.331705	0.127384	NA	0.319	NA	9.3773284
714	3	99643176	99643176	C	T	exonic	FILIP1L	NA	nonsynonymous SNV	FILIP1L:NM_001042459:exon4:c.G503A:p.R168H,FILIP1L:NM_182909:exon4:c.G503A:p.R168H	exonic	ENSG00000168386	NA	nonsynonymous SNV	ENSG00000168386:ENST00000331335:exon4:c.G503A:p.R168H,ENSG00000168386:ENST00000354552:exon4:c.G503A:p.R168H,ENSG00000168386:ENST00000398326:exon4:c.G503A:p.R168H	Score=608;Name=lod=396	NA	3q12.1	NA	NA	NA	NA	rs793440	0.24	0.24	0.208	0.253395	0.3111	0.1954	0.3545	0.1558	0.3139	0.33	0.14	0.33	0.16	0.3131	0.33	1	T	0.0	B	0.0	B	0.033	N	0.000	P	-2.605	N	1.0	T	-0.968	T	0.000	T	0.065	0.178	4.956	5.5	0.931	5.664	11.516	0.177581	NA	1	0.333007	0.19375	NA	0.174	NA	9.3761264
714	19	6897464	6897464	C	G	exonic;splicing	EMR1;EMR1	NM_001256255:exon5:c.418+2C>G	nonsynonymous SNV	EMR1:NM_001256252:exon4:c.C264G:p.S88R,EMR1:NM_001256253:exon5:c.C420G:p.S140R,EMR1:NM_001974:exon5:c.C420G:p.S140R	exonic;splicing	ENSG00000174837;ENSG00000174837	ENST00000450315:exon5:c.418+2C>G	nonsynonymous SNV	ENSG00000174837:ENST00000595026:exon3:c.C318G:p.S106R,ENSG00000174837:ENST00000381404:exon4:c.C264G:p.S88R,ENSG00000174837:ENST00000250572:exon5:c.C420G:p.S140R,ENSG00000174837:ENST00000312053:exon5:c.C420G:p.S140R	NA	NA	19p13.3	NA	NA	NA	NA	rs330880	0.47	0.47	0.5	0.501797	0.2734	0.4831	0.4496	0.8328	0.3456	0.26	0.51	0.41	0.8	0.378	0.8	0.54	T	0.001	B	0.007	B	.	.	1.000	P	1.1	L	-2.95	D	-0.968	T	0.000	T	0.056	-0.25	2.796	-3.22	-0.762	-1.976	5.443	-0.250332	NA	0.48	0.305814	0.728779	NA	0.486	NA	9.3761194
714	19	44055726	44055726	T	C	exonic	XRCC1	NA	nonsynonymous SNV	XRCC1:NM_006297:exon10:c.A1196G:p.Q399R	exonic	ENSG00000073050	NA	nonsynonymous SNV	ENSG00000073050:ENST00000543982:exon9:c.A1103G:p.Q368R,ENSG00000073050:ENST00000262887:exon10:c.A1196G:p.Q399R	Score=582;Name=lod=309	NA	19q13.31	Score=938;Name=V$LYF1_01	NA	NA	NA	rs25487	0.74	0.74	0.727	0.739617	0.6342	0.7649	0.6873	0.8896	0.6564	0.65	0.75	0.69	0.88	0.6834	0.88	1	T	0.0	B	0.0	B	0.000	N	0.999	P	.	.	2.85	T	-0.976	T	0.000	T	0.033	-0.568	1.441	4.13	0.842	1.854	7.732	-0.567604	NA	0.84	0.639651	0.844984	NA	0.754	NA	9.3760824
714	22	18301693	18301693	T	C	exonic	MICAL3	NA	nonsynonymous SNV	MICAL3:NM_015241:exon26:c.A3734G:p.Q1245R	exonic	ENSG00000243156	NA	nonsynonymous SNV	ENSG00000243156:ENST00000441493:exon26:c.A3734G:p.Q1245R	NA	NA	22q11.21	NA	NA	NA	NA	rs8135914	0.25	0.25	0.214	0.254992	0.331	0.0893	0.2161	0.3812	0.2045	0.31	0.08	0.24	0.37	0.3003	0.37	0.67	T	0.0	B	0.0	B	.	.	1.000	P	0.345	N	0.04	T	-0.949	T	0.000	T	0.016	0.193	5.042	-4.25	-1.684	-1.645	6.364	0.193465	NA	0.57	0.325966	0.332305	NA	0.21	NA	9.3760674
715	1	243329075	243329075	T	C	exonic	CEP170	NA	synonymous SNV	CEP170:NM_001042404:exon12:c.A1893G:p.K631K,CEP170:NM_001042405:exon12:c.A1893G:p.K631K,CEP170:NM_014812:exon13:c.A2187G:p.K729K	exonic	ENSG00000143702	NA	synonymous SNV	ENSG00000143702:ENST00000366543:exon12:c.A1893G:p.K631K,ENSG00000143702:ENST00000366544:exon12:c.A1893G:p.K631K,ENSG00000143702:ENST00000366542:exon13:c.A2187G:p.K729K	Score=381;Name=lod=47	NA	1q43	NA	NA	NA	NA	rs2728432	NA	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2923	NA	0.52	T	.	.	.	.	0.005	N	1.000	D	.	.	0.83	T	-1.091	T	0.092	T	.	-0.779	0.733	2.17	0.238	0.760	6.111	-0.779384	NA	NA	NA	NA	NA	NA	NA	9.3743666
715	7	57188016	57188016	A	G	exonic	ZNF479	NA	nonsynonymous SNV	ZNF479:NM_033273:exon5:c.T1106C:p.M369T	exonic	ENSG00000185177	NA	nonsynonymous SNV	ENSG00000185177:ENST00000331162:exon5:c.T1106C:p.M369T	NA	NA	7p11.2	NA	Name=ZNF274	NA	NA	rs11981414	0.33	0.33	0.281	0.321685	0.2913	0.5427	0.379	0.0915	0.3957	0.3	0.59	0.32	0.09	0.3383	0.59	1	T	0.0	B	0.0	B	.	.	1.000	P	-0.395	N	3.26	T	-0.923	T	0.000	T	0.02	-3.605	0.001	-0.375	-2.973	-1.761	2.196	-3.605008	NA	1	0.33042	0.129851	ID=COSM150297;OCCURENCE=1(stomach)	0.196	NA	9.3733134
715	14	91948043	91948043	T	C	exonic	SMEK1	NA	synonymous SNV	SMEK1:NM_032560:exon5:c.A792G:p.T264T	exonic	ENSG00000100796	NA	synonymous SNV	ENSG00000100796:ENST00000554390:exon4:c.A792G:p.T264T,ENSG00000100796:ENST00000554684:exon4:c.A792G:p.T264T,ENSG00000100796:ENST00000554943:exon4:c.A792G:p.T264T,ENSG00000100796:ENST00000337238:exon5:c.A792G:p.T264T	Score=838;Name=lod=3402	NA	14q32.12	NA	NA	NA	NA	rs17127374	0.05	0.05	0.051	0.0465256	0.1163	0.003	0.0605	0.0204	0.045	0.1	0.01	0.07	0.02	0.0755	0.1	.	.	.	.	.	.	.	.	1.000	D	.	.	.	.	-1.032	T	0.004	T	.	0.842	8.401	-2.82	-0.337	0.101	1.314	0.84192	NA	NA	0.104186	0.036995	NA	0.051	NA	9.3706806
715	11	554214	554214	G	C	exonic	LRRC56	NA	nonsynonymous SNV	LRRC56:NM_198075:exon14:c.G1567C:p.D523H	exonic	ENSG00000161328	NA	nonsynonymous SNV	ENSG00000161328:ENST00000270115:exon14:c.G1567C:p.D523H	NA	NA	11p15.5	NA	NA	NA	NA	rs10902171	0.81	0.81	0.797	0.791534	0.827	0.873	0.853	0.7057	0.7434	0.83	0.87	0.81	0.7	0.8171	0.87	0.16	T	0.983	D	0.615	P	0.457	N	1.000	P	0.805	L	2.85	T	-1.097	T	0.000	T	0.075	2.235	13.43	2.51	1.030	1.982	6.766	2.235403	2.235403	0.21	0.820963	0.714091	NA	0.536	NA	9.3682704
715	8	90990479	90990479	C	G	exonic	NBN	NA	nonsynonymous SNV	NBN:NM_002485:exon5:c.G553C:p.E185Q	exonic	ENSG00000104320	NA	nonsynonymous SNV	ENSG00000104320:ENST00000517772:exon3:c.G307C:p.E103Q,ENSG00000104320:ENST00000265433:exon5:c.G553C:p.E185Q,ENSG00000104320:ENST00000409330:exon5:c.G307C:p.E103Q	Score=548;Name=lod=225	NA	8q21.3	NA	NA	NA	NA	rs1805794	0.33	0.33	0.301	0.357029	0.3062	0.4673	0.3761	0.2307	0.453	0.31	0.46	0.34	0.22	0.3453	0.46	1	T	0.0	B	0.001	B	0.000	N	1.000	P	-0.855	N	0.51	T	-0.961	T	0.000	T	0.106	-0.041	3.805	3.08	0.091	2.133	13.939	-0.04088	NA	1	0.313605	0.233772	NA	0.341	NA	9.3682284
716	12	7242204	7242204	C	T	exonic	C1R	NA	unknown	UNKNOWN	exonic	ENSG00000159403	NA	nonsynonymous SNV	ENSG00000159403:ENST00000540610:exon3:c.G235A:p.E79K,ENSG00000159403:ENST00000535233:exon4:c.G448A:p.E150K,ENSG00000159403:ENST00000536053:exon4:c.G592A:p.E198K,ENSG00000159403:ENST00000542220:exon4:c.G550A:p.E184K,ENSG00000159403:ENST00000542285:exon4:c.G547A:p.E183K	NA	NA	12p13.31	NA	NA	NA	NA	rs1126605	0.17	0.17	0.168	0.17492	0.1014	0.3512	0.062	0.1513	0.181	0.1	0.36	0.07	0.15	0.1174	0.36	0.96	T	0.0	B	0.002	B	0.206	N	0.999	P	.	.	-4.06	D	-0.799	T	0.000	T	0.149	-1.079	0.163	-5.24	-1.367	-0.444	10.563	-1.079027	NA	1	0.083294	0.140244	NA	0.196	NA	9.3645727
716	3	197432029	197432029	C	A	exonic	KIAA0226	NA	synonymous SNV	KIAA0226:NM_001145642:exon3:c.G57T:p.T19T,KIAA0226:NM_014687:exon3:c.G237T:p.T79T	exonic	ENSG00000145016	NA	synonymous SNV	ENSG00000145016:ENST00000273582:exon3:c.G57T:p.T19T,ENSG00000145016:ENST00000296343:exon3:c.G237T:p.T79T,ENSG00000145016:ENST00000389665:exon3:c.G237T:p.T79T,ENSG00000145016:ENST00000449205:exon3:c.G237T:p.T79T	Score=548;Name=lod=225	NA	3q29	Score=786;Name=V$CDP_01	NA	NA	NA	rs60457064	0.14	0.14	0.171	0.153355	0.1034	0.0308	0.0692	0.3699	0.0982	0.1	0.04	0.07	0.36	0.1055	0.36	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	1.38	10.54	-1.45	-0.430	-0.645	0.753	1.379884	1.379884	NA	0.094184	0.311724	NA	0.232	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117388.2;CLNDSDB=.;CLNDSDBID=.	9.3635826
716	16	72162966	72162966	G	T	exonic	PMFBP1	NA	nonsynonymous SNV	PMFBP1:NM_031293:exon13:c.C1949A:p.T650K,PMFBP1:NM_001160213:exon14:c.C1514A:p.T505K	exonic	ENSG00000118557	NA	nonsynonymous SNV	ENSG00000118557:ENST00000537392:exon9:c.C1358A:p.T453K,ENSG00000118557:ENST00000237353:exon13:c.C1949A:p.T650K,ENSG00000118557:ENST00000355636:exon13:c.C1514A:p.T505K,ENSG00000118557:ENST00000537465:exon13:c.C1964A:p.T655K	Score=369;Name=lod=42	NA	16q22.2	NA	NA	NA	NA	rs34832584	0.08	0.08	0.075	0.0870607	0.16	0.0228	0.0634	0.0113	0.1973	0.17	0.02	0.07	0.02	0.1458	0.17	0.83	T	0.586	P	0.13	B	0.016	N	0.000	P	0.55	N	2.81	T	-0.972	T	0.000	T	0.208	-0.079	3.613	2.15	0.434	0.355	5.483	-0.079076	NA	0.18	0.163953	0.035032	NA	0.138	NA	9.3635804
716	1	170521376	170521376	G	A	exonic	GORAB	NA	nonsynonymous SNV	GORAB:NM_152281:exon5:c.G958A:p.E320K	exonic	ENSG00000120370	NA	nonsynonymous SNV	ENSG00000120370:ENST00000367763:exon5:c.G958A:p.E320K	NA	NA	1q24.2	NA	NA	NA	NA	rs913257	0.61	0.61	0.59	0.592652	0.4692	0.877	0.5865	0.5257	0.5215	0.49	0.91	0.51	0.53	0.5394	0.91	0.09	T	0.777	P	0.112	B	0.000	D	0.000	P	1.79	L	-0.01	T	-1.034	T	0.085	T	0.087	1.971	12.55	2.65	0.737	2.566	9.782	1.971203	1.971203	0.14	0.462674	0.531094	NA	0.623	NA	9.3620594
716	2	220422774	220422774	A	G	exonic	OBSL1	NA	synonymous SNV	OBSL1:NM_001173431:exon11:c.T3561C:p.P1187P,OBSL1:NM_015311:exon11:c.T3561C:p.P1187P	exonic	ENSG00000124006	NA	synonymous SNV	ENSG00000124006:ENST00000265317:exon3:c.T534C:p.P178P,ENSG00000124006:ENST00000265318:exon10:c.T3285C:p.P1095P,ENSG00000124006:ENST00000373876:exon11:c.T3561C:p.P1187P,ENSG00000124006:ENST00000404537:exon11:c.T3561C:p.P1187P,ENSG00000124006:ENST00000603926:exon11:c.T3561C:p.P1187P	NA	NA	2q35	Score=730;Name=V$NRSF_01	NA	NA	NA	rs2278201	0.45	0.45	0.401	0.419129	0.4433	0.3839	0.5245	0.5113	0.2311	0.45	0.4	0.47	0.48	0.4303	0.5	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.969	T	0.000	T	.	-1.289	0.04	-8.31	-2.193	-4.618	4.725	-1.288871	NA	NA	0.433084	0.503268	NA	0.507	NA	9.3599826
716	10	108367020	108367020	C	T	exonic	SORCS1	NA	synonymous SNV	SORCS1:NM_001013031:exon23:c.G3069A:p.A1023A,SORCS1:NM_001206569:exon23:c.G3069A:p.A1023A,SORCS1:NM_001206570:exon23:c.G3069A:p.A1023A,SORCS1:NM_001206571:exon23:c.G3069A:p.A1023A,SORCS1:NM_001206572:exon23:c.G3069A:p.A1023A,SORCS1:NM_052918:exon23:c.G3069A:p.A1023A	exonic	ENSG00000108018	NA	synonymous SNV	ENSG00000108018:ENST00000369698:exon15:c.G1674A:p.A558A,ENSG00000108018:ENST00000263054:exon23:c.G3069A:p.A1023A,ENSG00000108018:ENST00000344440:exon23:c.G3069A:p.A1023A	NA	NA	10q25.1	Score=855;Name=V$IK3_01	NA	NA	NA	rs7082289	0.16	0.16	0.177	0.237021	0.0765	0.2401	0.0994	0.323	0.3804	0.08	0.22	0.1	0.27	0.1471	0.28	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.017	T	0.000	T	.	0.298	5.613	-11.8	-5.598	-2.984	9.601	0.297926	NA	NA	0.083837	0.282796	NA	0.181	NA	9.3592296
716	3	134077470	134077470	C	G	exonic	AMOTL2	NA	nonsynonymous SNV	AMOTL2:NM_016201:exon9:c.G2196C:p.E732D	exonic	ENSG00000114019	NA	nonsynonymous SNV	ENSG00000114019:ENST00000249883:exon9:c.G2196C:p.E732D,ENSG00000114019:ENST00000422605:exon9:c.G2193C:p.E731D,ENSG00000114019:ENST00000513145:exon9:c.G2187C:p.E729D,ENSG00000114019:ENST00000514516:exon9:c.G2367C:p.E789D	NA	NA	3q22.2	NA	Name=CTCF_(SC-5916),Pol2,SMC3_(ab9263),CTCF,Rad21,CTCF_(C-20)	Name=26	NA	rs1353776	0.77	0.77	0.809	0.808706	0.6074	0.9246	0.7176	0.9357	0.7894	0.61	0.93	0.66	0.93	0.7111	0.93	1	T	0.0	B	0.001	B	0.000	N	1.000	P	-1.905	N	2.6	T	-0.860	T	0.000	T	0.014	-0.864	0.516	-11.0	-3.529	-2.805	9.742	-0.864124	NA	1	0.656977	0.874943	NA	0.783	NA	9.3578564
716	3	133341988	133341988	T	C	exonic	TOPBP1	NA	nonsynonymous SNV	TOPBP1:NM_007027:exon19:c.A3125G:p.N1042S	exonic	ENSG00000163781	NA	nonsynonymous SNV	ENSG00000163781:ENST00000260810:exon19:c.A3125G:p.N1042S	NA	NA	3q22.1	NA	NA	NA	NA	rs10935070	0.18	0.18	0.152	0.187899	0.3588	0.0258	0.2997	0.0106	0.3395	0.36	0.03	0.26	0.01	0.2898	0.36	0.8	T	0.0	B	0.0	B	0.972	N	1.000	P	0.205	N	2.78	T	-0.918	T	0.000	T	0.002	-0.378	2.223	-9.36	-2.029	-2.948	20.667	-0.377961	NA	0.57	0.327297	0.058791	NA	0.188	NA	9.3574364
716	16	20471450	20471450	G	A	exonic	ACSM2A	NA	nonsynonymous SNV	ACSM2A:NM_001010845:exon3:c.G14A:p.R5Q	exonic	ENSG00000183747	NA	nonsynonymous SNV	ENSG00000183747:ENST00000396104:exon1:c.G14A:p.R5Q,ENSG00000183747:ENST00000424070:exon2:c.G14A:p.R5Q,ENSG00000183747:ENST00000573854:exon2:c.G14A:p.R5Q,ENSG00000183747:ENST00000574692:exon2:c.G14A:p.R5Q,ENSG00000183747:ENST00000219054:exon3:c.G14A:p.R5Q,ENSG00000183747:ENST00000571894:exon3:c.G14A:p.R5Q,ENSG00000183747:ENST00000575690:exon3:c.G14A:p.R5Q,ENSG00000183747:ENST00000576361:exon3:c.G14A:p.R5Q	NA	NA	16p12.3	NA	NA	NA	NA	rs59292608	0.19	0.19	0.151	0.169529	0.172	0.4018	0.0706	0.0121	0.2106	0.19	0.4	0.08	0.01	0.1565	0.4	0.33	T	0.762	P	0.141	B	0.025	N	1.000	P	0	N	2.28	T	-0.996	T	0.000	T	0.242	0.881	8.575	-4.66	-0.830	-1.073	0.439	0.880844	NA	0.16	0.147791	0.031321	ID=COSM148036;OCCURENCE=1(stomach)	0.109	NA	9.3570424
716	8	39872935	39872935	T	A	exonic	IDO2	NA	stopgain	IDO2:NM_194294:exon11:c.T1077A:p.Y359X	exonic	ENSG00000188676	NA	stopgain	ENSG00000188676:ENST00000389060:exon10:c.T1038A:p.Y346X,ENSG00000188676:ENST00000502986:exon11:c.T1077A:p.Y359X	Score=387;Name=lod=50	NA	8p11.21	NA	NA	NA	NA	rs4503083	0.25	0.25	0.237	0.229832	0.2107	0.3601	0.317	0.112	0.2127	0.21	0.4	0.29	0.09	0.2257	0.4	.	.	.	.	.	.	0.001	N	0.000	P	.	.	.	.	.	.	.	.	.	3.695	18.77	-2.22	-0.380	0.394	15.055	3.694799	3.694799	NA	0.207451	0.109727	NA	0.304	NA	9.356149
717	11	86161388	86161388	C	G	exonic	ME3	NA	nonsynonymous SNV	ME3:NM_001014811:exon8:c.G972C:p.K324N,ME3:NM_001161586:exon9:c.G972C:p.K324N,ME3:NM_006680:exon9:c.G972C:p.K324N	exonic	ENSG00000151376	NA	nonsynonymous SNV	ENSG00000151376:ENST00000393324:exon8:c.G972C:p.K324N,ENSG00000151376:ENST00000359636:exon9:c.G972C:p.K324N,ENSG00000151376:ENST00000524826:exon9:c.G972C:p.K324N,ENSG00000151376:ENST00000543262:exon9:c.G972C:p.K324N	Score=618;Name=lod=435	NA	11q14.2	NA	NA	NA	NA	rs1042780	0.27	0.27	0.275	0.298323	0.327	0.2728	0.3516	0.2201	0.363	0.31	0.23	0.34	0.22	0.3157	0.36	.	.	0.008	B	0.028	B	0.020	N	0.000	P	0.93	L	0.99	T	-0.949	T	0.000	T	0.091	2.343	13.79	2.51	0.814	2.043	8.001	2.343035	2.343035	0.24	0.335776	0.233651	ID=COSM147300;OCCURENCE=1(stomach)	0.406	NA	9.3548574
717	12	6840209	6840209	G	A	UTR3	COPS7A	NM_001164094:c.*4G>A,NM_016319:c.*4G>A,NM_001164095:c.*4G>A,NM_001164093:c.*4G>A	NA	NA	exonic	ENSG00000111652	NA	nonsynonymous SNV	ENSG00000111652:ENST00000538410:exon7:c.G680A:p.G227E	Score=523;Name=lod=178	NA	12p13.31	NA	Name=EBF	NA	NA	rs3168600	0.64	0.64	0.636	0.668331	0.661	0.749	0.5922	0.5446	0.8139	0.65	0.75	0.62	0.52	0.6689	0.75	1	T	0.131	B	0.04	B	.	.	0.000	P	.	.	.	.	-1.003	T	0.000	T	0.298	1.783	11.92	4.82	2.497	4.150	16.270	1.783055	1.783055	NA	0.649186	0.55833	NA	0.529	NA	9.3542474
717	9	96209943	96209943	T	C	exonic	FAM120AOS	NA	nonsynonymous SNV	FAM120AOS:NM_198841:exon3:c.A721G:p.K241E	exonic	ENSG00000188938	NA	nonsynonymous SNV	ENSG00000188938:ENST00000375412:exon3:c.A721G:p.K241E,ENSG00000188938:ENST00000423591:exon3:c.A175G:p.K59E,ENSG00000188938:ENST00000428378:exon3:c.A172G:p.K58E	NA	NA	9q22.31	NA	Name=GATA-1	NA	NA	rs10821128	0.31	0.31	0.293	0.227236	0.3479	0.4117	0.3069	0.0363	0.1145	0.36	0.45	0.36	0.05	0.297	0.45	0	D	0.0	B	0.0	B	.	.	1.000	P	0	N	0.63	T	-0.939	T	0.000	T	0.043	-0.314	2.509	-1.41	-0.371	-1.584	5.358	-0.313505	NA	0.2	0.336977	0.091466	NA	0.21	NA	9.3514564
717	7	29070320	29070320	C	T	exonic	CPVL	NA	nonsynonymous SNV	CPVL:NM_019029:exon12:c.G1193A:p.R398H,CPVL:NM_031311:exon12:c.G1193A:p.R398H	exonic	ENSG00000106066	NA	nonsynonymous SNV	ENSG00000106066:ENST00000455893:exon2:c.G188A:p.R63H,ENSG00000106066:ENST00000265394:exon12:c.G1193A:p.R398H,ENSG00000106066:ENST00000396276:exon12:c.G1193A:p.R398H,ENSG00000106066:ENST00000409850:exon16:c.G1193A:p.R398H	Score=433;Name=lod=77	NA	7p14.3	NA	NA	NA	NA	rs1052200	0.19	0.19	0.17	0.205471	0.1521	0.2649	0.281	0.1604	0.2065	0.16	0.26	0.22	0.14	0.1879	0.26	0.54	T	0.512	P	0.133	B	0.000	N	0.001	P	1.76	L	1.51	T	-0.972	T	0.000	T	0.285	1.198	9.868	1.97	0.364	1.058	9.388	1.19828	NA	0.15	0.142674	0.157739	NA	0.159	NA	9.3506594
717	10	27687965	27687965	A	G	exonic	PTCHD3	NA	nonsynonymous SNV	PTCHD3:NM_001034842:exon4:c.T1562C:p.M521T	exonic	ENSG00000182077	NA	nonsynonymous SNV	ENSG00000182077:ENST00000438700:exon4:c.T1562C:p.M521T	Score=463;Name=lod=102	NA	10p12.1	NA	NA	NA	NA	rs2505327	0.53	0.53	0.499	0.54992	0.6829	0.37	0.5202	0.5257	0.6524	0.68	0.31	0.56	0.54	0.6187	0.68	0.86	T	0.0	B	0.001	B	0.005	N	0.986	P	-2.255	N	-1.95	D	-0.935	T	0.000	T	0.048	-1.257	0.049	4.08	0.934	3.946	11.730	-1.256648	NA	NA	0.681554	0.534725	NA	0.543	NA	9.3501794
717	13	41515286	41515286	T	A	exonic	ELF1	NA	nonsynonymous SNV	ELF1:NM_001145353:exon7:c.A955T:p.T319S,ELF1:NM_172373:exon8:c.A1027T:p.T343S	exonic	ENSG00000120690	NA	nonsynonymous SNV	ENSG00000120690:ENST00000442101:exon7:c.A955T:p.T319S,ENSG00000120690:ENST00000239882:exon8:c.A1027T:p.T343S	Score=490;Name=lod=131	NA	13q14.11	NA	NA	Name=13	NA	rs1056820	0.44	0.44	0.394	0.413538	0.7097	0.1538	0.6657	0.152	0.5511	0.73	0.16	0.63	0.17	0.5957	0.73	0.84	T	0.008	B	0.016	B	0.187	N	0.161	P	1.1	L	0.61	T	-0.951	T	0.000	T	0.022	1.382	10.55	4.3	1.026	0.626	5.668	1.382206	1.382206	0.44	0.678372	0.220608	ID=COSM1366878;OCCURENCE=1(large_intestine)	0.478	NA	9.3495614
717	11	68030173	68030173	C	A	exonic	C11orf24	NA	nonsynonymous SNV	C11orf24:NM_022338:exon4:c.G290T:p.G97V	exonic	ENSG00000171067	NA	nonsynonymous SNV	ENSG00000171067:ENST00000304271:exon4:c.G290T:p.G97V	NA	NA	11q13.2	NA	Name=ZNF263	NA	NA	rs3802746	0.34	0.34	0.305	0.383387	0.3062	0.4752	0.513	0.1309	0.6176	0.31	0.46	0.49	0.11	0.3728	0.49	0.33	T	0.995	D	0.919	D	.	.	1.000	P	1.65	L	0.54	T	-0.923	T	0.000	T	0.08	1.807	12	1.45	0.746	0.759	6.607	1.806515	1.806515	0.02	0.306591	0.156818	NA	0.283	NA	9.3477424
717	19	53117017	53117017	T	G	exonic	ZNF83	NA	synonymous SNV	ZNF83:NM_001105554:exon3:c.A801C:p.G267G,ZNF83:NM_001277951:exon3:c.A801C:p.G267G,ZNF83:NM_018300:exon3:c.A801C:p.G267G,ZNF83:NM_001105552:exon4:c.A801C:p.G267G,ZNF83:NM_001242538:exon4:c.A801C:p.G267G,ZNF83:NM_001277946:exon4:c.A801C:p.G267G,ZNF83:NM_001105550:exon5:c.A801C:p.G267G,ZNF83:NM_001105551:exon5:c.A801C:p.G267G,ZNF83:NM_001277948:exon5:c.A801C:p.G267G,ZNF83:NM_001277949:exon5:c.A801C:p.G267G,ZNF83:NM_001277952:exon5:c.A801C:p.G267G,ZNF83:NM_001105549:exon6:c.A801C:p.G267G,ZNF83:NM_001105553:exon6:c.A801C:p.G267G,ZNF83:NM_001242531:exon6:c.A801C:p.G267G,ZNF83:NM_001277945:exon6:c.A801C:p.G267G,ZNF83:NM_001277947:exon6:c.A801C:p.G267G	exonic	ENSG00000167766	NA	synonymous SNV	ENSG00000167766:ENST00000391789:exon1:c.A801C:p.G267G,ENSG00000167766:ENST00000541777:exon2:c.A801C:p.G267G,ENSG00000167766:ENST00000597597:exon2:c.A801C:p.G267G,ENSG00000167766:ENST00000301096:exon3:c.A801C:p.G267G,ENSG00000167766:ENST00000545872:exon3:c.A801C:p.G267G,ENSG00000167766:ENST00000536937:exon5:c.A801C:p.G267G,ENSG00000167766:ENST00000544146:exon6:c.A801C:p.G267G	Score=309;Name=lod=24	NA	19q13.41	NA	Name=SETDB1,ZNF274	NA	NA	rs7248435	NA	NA	0.19	0.273163	0.2137	0.497	0.4323	0.1649	0.137	NA	NA	NA	NA	NA	0.11	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	-1.293	0.039	0.536	0.214	-3.515	4.165	-1.293052	NA	NA	0.105465	0.087154	NA	0.022	NA	9.3475016
717	2	24524958	24524958	C	T	exonic	ITSN2	NA	nonsynonymous SNV	ITSN2:NM_006277:exon10:c.G871A:p.V291I,ITSN2:NM_019595:exon10:c.G871A:p.V291I,ITSN2:NM_147152:exon10:c.G871A:p.V291I	exonic	ENSG00000198399	NA	nonsynonymous SNV	ENSG00000198399:ENST00000355123:exon10:c.G871A:p.V291I,ENSG00000198399:ENST00000361999:exon10:c.G871A:p.V291I,ENSG00000198399:ENST00000406921:exon10:c.G871A:p.V291I,ENSG00000198399:ENST00000412011:exon11:c.G946A:p.V316I	Score=503;Name=lod=147	NA	2p23.3	NA	NA	NA	NA	rs7603997	0.3	0.3	0.323	0.292133	0.3509	0.1915	0.2075	0.388	0.2658	0.35	0.19	0.23	0.41	0.3046	0.42	1	T	0.948	P	0.596	P	0.002	N	1.000	P	-0.205	N	1.71	T	-1.057	T	0.000	T	0.091	-0.179	3.13	2.11	0.338	0.343	9.130	-0.178539	NA	1	0.330349	0.422833	NA	0.406	NA	9.3474844
717	19	58420162	58420162	T	C	exonic	ZNF417	NA	nonsynonymous SNV	ZNF417:NM_152475:exon3:c.A1484G:p.N495S	exonic	ENSG00000173480	NA	nonsynonymous SNV	ENSG00000173480:ENST00000312026:exon3:c.A1484G:p.N495S,ENSG00000173480:ENST00000595559:exon3:c.A1481G:p.N494S,ENSG00000173480:ENST00000536263:exon4:c.A887G:p.N296S	NA	NA	19q13.43	NA	NA	NA	NA	rs10416584	0.28	0.28	0.195	0.314696	0.3698	0.2996	0.2882	0.2943	0.32	0.32	0.25	0.3	0.22	0.3255	0.39	1	T	0.0	B	0.001	B	.	.	1.000	P	0.24	N	3.21	T	-0.945	T	0.000	T	0.01	-1.121	0.125	-4.76	-3.048	-8.711	1.071	-1.120845	NA	1	0.2906	0.215842	NA	0.341	NA	9.3474334
717	11	124189306	124189306	G	A	exonic	OR8D2	NA	nonsynonymous SNV	OR8D2:NM_001002918:exon1:c.C788T:p.P263L	exonic	ENSG00000197263	NA	nonsynonymous SNV	ENSG00000197263:ENST00000357438:exon1:c.C788T:p.P263L	NA	NA	11q24.2	NA	NA	NA	NA	rs2466620	0.24	0.24	0.239	0.277556	0.1292	0.1895	0.2003	0.4531	0.3384	0.13	0.22	0.2	0.46	0.2086	0.46	0.02	D	0.698	P	0.419	B	0.038	N	1.000	P	0.8	N	8.64	T	-1.267	T	0.000	T	0.088	2.407	14.01	1.41	0.435	1.552	8.25	2.407143	2.407143	0.04	0.148639	0.423217	NA	0.348	NA	9.3468944
717	17	38122686	38122686	G	A	exonic	GSDMA	NA	nonsynonymous SNV	GSDMA:NM_178171:exon3:c.G388A:p.E130K	exonic	ENSG00000167914	NA	nonsynonymous SNV	ENSG00000167914:ENST00000301659:exon3:c.G388A:p.E130K,ENSG00000167914:ENST00000577447:exon3:c.G388A:p.E130K	Score=289;Name=lod=20	NA	17q21.1	NA	NA	NA	NA	rs7212944	0.35	0.35	0.361	0.31849	0.331	0.38	0.2795	0.3389	0.2423	0.33	0.4	0.28	0.37	0.3264	0.42	0.76	T	0.037	B	0.062	B	0.958	N	0.999	P	0.045	N	2.03	T	-0.914	T	0.000	T	0.175	1.149	9.682	2.99	0.692	2.671	7.407	1.149475	NA	NA	0.329467	0.33729	NA	0.406	NA	9.3464664
717	1	27210721	27210721	T	C	exonic	GPN2	NA	nonsynonymous SNV	GPN2:NM_018066:exon4:c.A790G:p.R264G	exonic	ENSG00000142751	NA	nonsynonymous SNV	ENSG00000142751:ENST00000374133:exon3:c.A253G:p.R85G,ENSG00000142751:ENST00000374135:exon4:c.A790G:p.R264G	Score=594;Name=lod=346	NA	1p36.11	NA	NA	NA	NA	rs3170660	0.84	0.84	0.842	0.873203	0.6292	0.997	0.8256	0.9781	0.8885	0.63	1	0.81	0.98	0.732	1	1	T	0.0	B	0.0	B	0.000	N	0.917	P	0	N	2.37	T	-0.920	T	0.000	T	0.142	1.021	9.172	5.48	1.329	5.788	14.182	1.021476	NA	1	0.626512	0.916931	NA	0.848	NA	9.3456214
718	10	112266823	112266823	C	T	exonic	DUSP5	NA	nonsynonymous SNV	DUSP5:NM_004419:exon3:c.C659T:p.A220V	exonic	ENSG00000138166	NA	nonsynonymous SNV	ENSG00000138166:ENST00000369583:exon3:c.C659T:p.A220V	Score=393;Name=lod=53	NA	10q25.2	NA	Name=Pol2-4H8	NA	NA	rs1889565	0.82	0.82	0.964	0.973243	1	1	0.9928	0.9024	1	0.84	0.88	0.86	0.68	0.991	1	0	D	0.017	B	0.015	B	0.001	D	1.000	P	0.715	N	0.14	T	-1.024	T	0.000	T	0.053	2.841	15.46	3.8	0.762	0.910	5.665	2.840994	2.840994	0.02	0.999651	0.903768	NA	NA	NA	9.3426824
718	18	48333203	48333203	C	G	exonic	MRO	NA	nonsynonymous SNV	MRO:NM_001127174:exon3:c.G117C:p.R39S,MRO:NM_001127175:exon3:c.G159C:p.R53S,MRO:NM_001127176:exon3:c.G159C:p.R53S,MRO:NM_031939:exon4:c.G117C:p.R39S	exonic	ENSG00000134042	NA	nonsynonymous SNV	ENSG00000134042:ENST00000431965:exon3:c.G159C:p.R53S,ENSG00000134042:ENST00000436348:exon3:c.G159C:p.R53S,ENSG00000134042:ENST00000588444:exon3:c.G117C:p.R39S,ENSG00000134042:ENST00000592966:exon3:c.G117C:p.R39S,ENSG00000134042:ENST00000256425:exon4:c.G117C:p.R39S,ENSG00000134042:ENST00000398439:exon4:c.G117C:p.R39S,ENSG00000134042:ENST00000585524:exon4:c.G262C:p.V88L,ENSG00000134042:ENST00000428869:exon5:c.G117C:p.R39S	NA	NA	18q21.2	Score=760;Name=V$STAT5A_02	NA	NA	NA	rs4940019	0.45	0.45	0.404	0.463059	0.496	0.4673	0.6816	0.1929	0.635	0.49	0.5	0.64	0.19	0.5139	0.64	0.72	T	0.519	P	0.251	B	0.002	N	1.000	P	2.2	M	2.38	T	-0.911	T	0.000	T	0.109	0.564	7.049	2.63	0.271	0.590	5.164	0.564038	NA	0.06	0.482093	0.241716	NA	0.471	NA	9.3413404
718	10	70892791	70892791	C	T	exonic	VPS26A	NA	synonymous SNV	VPS26A:NM_001035260:exon2:c.C141T:p.S47S,VPS26A:NM_004896:exon2:c.C141T:p.S47S	exonic	ENSG00000122958	NA	nonsynonymous SNV	ENSG00000122958:ENST00000546041:exon2:c.C14T:p.P5L	Score=510;Name=lod=158	NA	10q22.1	NA	NA	NA	NA	rs5030932	0.18	0.18	0.163	0.167532	0.2545	0.0367	0.1297	0.2723	0.0982	0.25	0.02	0.16	0.26	0.1921	0.26	0.68	T	0.0	B	0.0	B	.	.	0.000	P	.	.	.	.	-0.975	T	0.000	T	.	0.077	4.419	-2.87	-0.793	-1.102	0.987	0.077459	NA	NA	0.212674	0.249206	ID=COSM1241893;OCCURENCE=1(oesophagus)	0.275	NA	9.340726
718	22	22868493	22868493	G	T	exonic	ZNF280A	NA	nonsynonymous SNV	ZNF280A:NM_080740:exon2:c.C1462A:p.R488S	exonic	ENSG00000169548	NA	nonsynonymous SNV	ENSG00000169548:ENST00000302097:exon2:c.C1462A:p.R488S	Score=349;Name=lod=35	NA	22q11.22	NA	NA	NA	NA	rs361666	0.53	0.53	0.479	0.471645	0.7018	0.4107	0.732	0.2375	0.4294	0.7	0.43	0.7	0.26	0.6099	0.7	0.15	T	0.024	B	0.008	B	.	.	0.640	P	1.1	L	5.29	T	-1.098	T	0.000	T	0.105	1.491	10.94	3.76	2.372	4.885	13.875	1.491486	1.491486	0.03	0.68093	0.307989	NA	0.399	NA	9.3407034
718	11	56344993	56344993	C	A	exonic	OR5M10	NA	nonsynonymous SNV	OR5M10:NM_001004741:exon1:c.G205T:p.V69L	exonic	ENSG00000254834	NA	nonsynonymous SNV	ENSG00000254834:ENST00000526812:exon1:c.G205T:p.V69L	Score=284;Name=lod=19	NA	11q12.1	NA	NA	NA	NA	rs10792043	0.64	0.64	0.573	0.653754	0.6501	0.874	0.719	0.3517	0.7924	0.64	0.87	0.74	0.28	0.6779	0.87	0.13	T	0.09	B	0.063	B	.	.	0.998	P	0.77	N	5.64	T	-0.958	T	0.000	T	0.04	2.043	12.79	4.04	2.238	-1.748	7.392	2.042699	2.042699	NA	0.665419	0.412731	NA	0.572	NA	9.3399144
718	17	78184393	78184393	C	T	exonic	SGSH	NA	nonsynonymous SNV	SGSH:NM_000199:exon8:c.G1367A:p.R456H	exonic	ENSG00000181523	NA	nonsynonymous SNV	ENSG00000181523:ENST00000534910:exon7:c.G758A:p.R253H,ENSG00000181523:ENST00000326317:exon8:c.G1367A:p.R456H	NA	NA	17q25.3	NA	NA	NA	NA	rs7503034	0.33	0.33	0.268	0.345847	0.3032	0.3998	0.4769	0.2126	0.4213	0.31	0.37	0.44	0.21	0.3592	0.44	0.12	T	0.0	B	0.0	B	0.198	N	0.001	P	0.345	N	-1.1	T	-1.062	T	0.000	T	0.032	0.32	5.737	-6.91	-1.268	-0.308	10.126	0.320438	NA	0.08	0.331395	0.220835	NA	0.348	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000078352.1;CLNDSDB=.;CLNDSDBID=.	9.3395384
718	22	22869123	22869123	T	C	exonic	ZNF280A	NA	nonsynonymous SNV	ZNF280A:NM_080740:exon2:c.A832G:p.N278D	exonic	ENSG00000169548	NA	nonsynonymous SNV	ENSG00000169548:ENST00000302097:exon2:c.A832G:p.N278D	Score=376;Name=lod=45	NA	22q11.22	NA	NA	NA	NA	rs362003	0.53	0.53	0.486	0.473642	0.7028	0.4137	0.7334	0.2398	0.4315	0.7	0.43	0.7	0.26	0.6102	0.7	1	T	0.0	B	0.0	B	.	.	1.000	P	-2.56	N	5.64	T	-1.038	T	0.000	T	0.004	-1.412	0.022	2.54	1.063	3.227	7.296	-1.41217	NA	1	0.680814	0.307989	NA	0.406	NA	9.3395194
718	3	10353626	10353626	C	T	intronic	SEC13	NA	NA	NA	intronic	ENSG00000157020	NA	NA	NA	NA	NA	3p25.3	NA	Name=Pol2	NA	NA	rs35671	0.19	0.19	0.207	0.196286	0.2346	0.0258	0.2219	0.2632	0.2239	0.23	0.02	0.22	0.32	0.1998	0.32	0.01	D	0.0	B	0.0	B	.	.	1.000	P	.	.	.	.	-1.048	T	0.000	T	.	-0.992	0.273	-6.27	-4.679	-4.721	2.607	-0.991745	NA	0.18	0.227093	0.247163	NA	0.362	NA	9.338507
718	11	67352689	67352689	A	G	exonic	GSTP1	NA	nonsynonymous SNV	GSTP1:NM_000852:exon5:c.A313G:p.I105V	exonic	ENSG00000084207	NA	nonsynonymous SNV	ENSG00000084207:ENST00000398603:exon5:c.A313G:p.I105V,ENSG00000084207:ENST00000398606:exon5:c.A313G:p.I105V	NA	NA	11q13.2	Score=697;Name=V$PPARG_02	Name=CTCF_(SC-5916),USF-1	NA	NA	rs1695	0.32	0.32	0.295	0.352636	0.331	0.1786	0.4755	0.4803	0.2945	0.32	0.17	0.43	0.44	0.3335	0.44	1	T	0.0	B	0.0	B	0.320	N	0.999	P	-0.67	N	3.96	T	-0.938	T	0.000	T	0.018	-2.264	0.004	-1.16	-0.473	-1.510	6.983	-2.264068	NA	1	0.331667	0.419626	NA	0.362	NA	9.3371664
719	5	35861068	35861068	T	C	exonic	IL7R	NA	nonsynonymous SNV	IL7R:NM_002185:exon2:c.T197C:p.I66T	exonic	ENSG00000168685	NA	nonsynonymous SNV	ENSG00000168685:ENST00000303115:exon2:c.T197C:p.I66T,ENSG00000168685:ENST00000343305:exon2:c.T197C:p.I66T,ENSG00000168685:ENST00000506850:exon2:c.T197C:p.I66T,ENSG00000168685:ENST00000511982:exon2:c.T197C:p.I66T,ENSG00000168685:ENST00000514217:exon2:c.T197C:p.I66T	Score=431;Name=lod=75	NA	5p13.2	NA	NA	Name=44	NA	rs1494558	0.61	0.61	0.586	0.59984	0.6978	0.4256	0.5418	0.7625	0.5	0.7	0.4	0.57	0.75	0.6279	0.75	.	.	0.0	B	0.0	B	0.505	N	1.000	P	.	.	-0.76	T	-0.953	T	0.000	T	0.028	-1.522	0.016	2.16	0.111	0.337	3.678	-1.521583	NA	1	0.673605	0.754199	ID=COSM149813;OCCURENCE=1(stomach)	0.616	CLINSIG=pathogenic|untested;CLNDBN=Severe_combined_immunodeficiency\x2c_autosomal_recessive\x2c_T_cell-negative\x2c_B_cell-positive\x2c_NK_cell-positive|not_specified;CLNREVSTAT=single|not;CLNACC=RCV000015964.24|RCV000121212.1;CLNDSDB=MedGen:OMIM|.;CLNDSDBID=C1837028:608971|.	9.3340284
719	7	100549697	100549697	A	G	intergenic	ACHE,MUC12	dist=56156;dist=63207	NA	NA	exonic	ENSG00000228273	NA	nonsynonymous SNV	ENSG00000228273:ENST00000379458:exon2:c.A278G:p.N93S	NA	NA	7q22.1	NA	Name=CTCF	NA	NA	rs77036391	NA	NA	NA	0.00199681	NA	0.0069	0.0043	NA	NA	NA	NA	NA	NA	0.4999	0.48	0.9	T	.	.	.	.	.	.	.	.	-0.55	N	.	.	-1.010	T	0.025	T	0.061	-1.52	0.016	-3.51	-1.667	-1.456	4.422	-1.519788	NA	1	NA	NA	NA	0.478	NA	9.3334334
719	17	21215557	21215557	G	A	exonic	MAP2K3	NA	nonsynonymous SNV	MAP2K3:NM_002756:exon10:c.G791A:p.R264H,MAP2K3:NM_145109:exon10:c.G878A:p.R293H	exonic	ENSG00000034152	NA	nonsynonymous SNV	ENSG00000034152:ENST00000527123:exon1:c.G104A:p.R35H,ENSG00000034152:ENST00000342679:exon10:c.G878A:p.R293H,ENSG00000034152:ENST00000361818:exon10:c.G791A:p.R264H,ENSG00000034152:ENST00000316920:exon11:c.G791A:p.R264H	NA	NA	17p11.2	NA	NA	Name=4	NA	rs35206134	0.5	0.5	0.45	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.4999	0.5	0.09	T	0.991	D	0.836	P	0.064	N	0.991	N	0.42	N	-0.18	T	-0.952	T	0.000	T	0.234	3.412	17.53	0.552	-0.076	0.507	5.924	3.411528	3.411528	0.09	NA	NA	NA	0.493	NA	9.3334334
719	6	26234450	26234450	T	G	UTR3	HIST1H1D	NM_005320:c.*46A>C	NA	NA	UTR3	ENSG00000124575	ENST00000244534:c.*46A>C	NA	NA	Score=536;Name=lod=202	NA	6p22.2	NA	Name=HEY1,NFKB,Oct-2,Pol2,Sin3Ak-20,TAF7_(SQ-8),Pol2-4H8,JunD,ETS1,POU2F2	Name=129	Score=262;Name=2017125_0_+_262	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.755318	2.755318	NA	NA	NA	NA	NA	NA	9.3333334
719	8	25365148	25365148	C	T	exonic	CDCA2	NA	nonsynonymous SNV	CDCA2:NM_152562:exon15:c.C2966T:p.T989I	exonic	ENSG00000184661	NA	nonsynonymous SNV	ENSG00000184661:ENST00000380665:exon14:c.C2921T:p.T974I,ENSG00000184661:ENST00000330560:exon15:c.C2966T:p.T989I	NA	NA	8p21.2	NA	NA	Name=24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.29	T	0.178	B	0.165	B	0.159	N	1.000	N	0.805	L	1.44	T	-1.036	T	0.054	T	0.093	2.196	13.3	0.542	0.073	-0.220	1.929	2.195731	2.195731	0.06	NA	NA	NA	NA	NA	9.3333334
719	17	21318952	21318952	A	G	exonic	KCNJ12,KCNJ18	NA	nonsynonymous SNV	KCNJ18:NM_001194958:exon3:c.A298G:p.I100V,KCNJ12:NM_021012:exon3:c.A298G:p.I100V	exonic	ENSG00000184185	NA	nonsynonymous SNV	ENSG00000184185:ENST00000331718:exon3:c.A298G:p.I100V,ENSG00000184185:ENST00000583088:exon3:c.A298G:p.I100V	NA	NA	17p11.2	Score=762;Name=V$TCF11MAFG_01	NA	NA	NA	rs8076599	0.5	0.5	NA	0.4998	0.5	0.5	0.5	0.4992	0.5	0.5	0.5	0.5	0.5	0.5	0.5	0.48	T	0.0	B	0.001	B	0.069	N	1.000	N	-0.67	N	-3.76	D	-0.935	T	0.000	T	0.131	-0.84	0.574	-3.72	-0.937	-0.470	4.056	-0.839995	NA	0.54	NA	NA	NA	0.319	NA	9.3333334
719	19	36342551	36342551	C	G	exonic	NPHS1	NA	nonsynonymous SNV	NPHS1:NM_004646:exon2:c.G82C:p.A28P	exonic	ENSG00000161270	NA	nonsynonymous SNV	ENSG00000161270:ENST00000353632:exon2:c.G82C:p.A28P,ENSG00000161270:ENST00000378910:exon2:c.G82C:p.A28P	NA	NA	19q13.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00001963	NA	0.04	D	0.442	B	0.135	B	0.002	N	1.000	N	0.46	N	-0.71	T	-0.891	T	0.178	T	0.423	3.67	18.65	1.41	0.574	.	7.226	3.669784	3.669784	0.03	NA	NA	NA	NA	NA	9.3333138
719	9	135140221	135140221	G	A	exonic	SETX	NA	nonsynonymous SNV	SETX:NM_015046:exon26:c.C7439T:p.A2480V	exonic	ENSG00000107290	NA	nonsynonymous SNV	ENSG00000107290:ENST00000436441:exon17:c.C2252T:p.A751V,ENSG00000107290:ENST00000393220:exon25:c.C7340T:p.A2447V,ENSG00000107290:ENST00000224140:exon26:c.C7439T:p.A2480V,ENSG00000107290:ENST00000372169:exon27:c.C7526T:p.A2509V	NA	NA	9q34.13	NA	NA	NA	NA	rs376524608	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00004118	0.0001	0.25	T	0.041	B	0.011	B	0.065	N	1.000	N	1.67	L	-1.73	D	-0.448	T	0.554	D	0.051	2.064	12.86	0.049	0.154	0.645	7.848	2.064254	2.064254	0.08	0.000116	0	NA	NA	NA	9.3331762
719	14	51226983	51226983	G	A	exonic	NIN	NA	nonsynonymous SNV	NIN:NM_016350:exon17:c.C1991T:p.T664I,NIN:NM_020921:exon17:c.C1991T:p.T664I,NIN:NM_182944:exon17:c.C1991T:p.T664I,NIN:NM_182946:exon17:c.C1991T:p.T664I	exonic	ENSG00000100503	NA	nonsynonymous SNV	ENSG00000100503:ENST00000530997:exon15:c.C1991T:p.T664I,ENSG00000100503:ENST00000382043:exon16:c.C1991T:p.T664I,ENSG00000100503:ENST00000245441:exon17:c.C1991T:p.T664I,ENSG00000100503:ENST00000324330:exon17:c.C1991T:p.T664I,ENSG00000100503:ENST00000382041:exon17:c.C1991T:p.T664I,ENSG00000100503:ENST00000389868:exon17:c.C1991T:p.T664I,ENSG00000100503:ENST00000453196:exon17:c.C1991T:p.T664I,ENSG00000100503:ENST00000476352:exon17:c.C1991T:p.T664I	NA	NA	14q22.1	NA	Name=YY1	Name=3	NA	rs147946706	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0003	0.0001	0.32	T	0.002	B	0.009	B	0.980	N	1.000	N	0.4	N	3.51	T	-0.949	T	0.021	T	0.2	1.095	9.467	1.72	0.284	0.443	6.837	1.094578	NA	0.16	0.000116	0	NA	NA	NA	9.3329174
719	9	35869498	35869498	C	T	exonic	OR13J1	NA	nonsynonymous SNV	OR13J1:NM_001004487:exon1:c.G901A:p.A301T	exonic	ENSG00000168828	NA	nonsynonymous SNV	ENSG00000168828:ENST00000377981:exon1:c.G901A:p.A301T	NA	NA	9p13.3	NA	NA	NA	NA	rs146834712	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0002	0.0005	0.02	D	0.01	B	0.002	B	0.254	N	1.000	N	1.04	L	1.19	T	-1.018	T	0.071	T	0.158	0.457	6.481	2.66	0.417	-0.387	11.945	0.456986	NA	0.01	0.000465	0	NA	NA	NA	9.3326684
719	1	62910770	62910770	A	G	exonic	USP1	NA	nonsynonymous SNV	USP1:NM_001017415:exon6:c.A919G:p.T307A,USP1:NM_001017416:exon6:c.A919G:p.T307A,USP1:NM_003368:exon6:c.A919G:p.T307A	exonic	ENSG00000162607	NA	nonsynonymous SNV	ENSG00000162607:ENST00000339950:exon6:c.A919G:p.T307A,ENSG00000162607:ENST00000371146:exon6:c.A919G:p.T307A	NA	NA	1p31.3	NA	NA	NA	NA	NA	NA	NA	NA	0.000199681	0.001	NA	NA	NA	NA	NA	NA	NA	NA	0.000008339	NA	0.74	T	0.0	B	0.003	B	0.026	N	1.000	N	1.245	L	2.29	T	-0.985	T	0.019	T	0.043	1.112	9.536	-2.73	-0.331	0.344	0.537	1.112106	NA	0.32	NA	NA	NA	NA	NA	9.3323251
719	8	96259948	96259948	T	C	exonic	C8orf37	NA	nonsynonymous SNV	C8orf37:NM_177965:exon6:c.A521G:p.K174R	exonic	ENSG00000156172	NA	nonsynonymous SNV	ENSG00000156172:ENST00000286688:exon6:c.A521G:p.K174R	Score=363;Name=lod=40	NA	8q22.1	NA	NA	NA	NA	rs148114532	NA	NA	NA	0.000998403	NA	NA	NA	NA	0.0051	NA	NA	NA	NA	0.0007	0.0006	0.1	T	0.433	B	0.127	B	0.007	N	0.955	N	1.87	L	-1.65	D	-0.551	T	0.422	T	0.133	2.839	15.46	1.45	0.006	0.561	13.087	2.838787	2.838787	0.3	0.000581	0	NA	NA	NA	9.3320524
719	20	44511254	44511254	C	T	exonic	ZSWIM1	NA	nonsynonymous SNV	ZSWIM1:NM_080603:exon2:c.C23T:p.P8L	exonic	ENSG00000168612	NA	nonsynonymous SNV	ENSG00000168612:ENST00000372520:exon2:c.C23T:p.P8L,ENSG00000168612:ENST00000372523:exon2:c.C23T:p.P8L	NA	NA	20q13.12	NA	Name=NRSF	NA	NA	rs35165640	0.0005	0.0005	NA	0.000199681	0.001	NA	NA	NA	NA	0.0013	NA	NA	NA	0.0002	0.0013	0.02	D	0.011	B	0.001	B	.	.	1.000	N	0	N	1.84	T	-1.014	T	0.028	T	0.087	0.073	4.395	0.014	-0.031	-0.016	3.879	0.072866	NA	0.21	0.000349	0	NA	NA	NA	9.3317844
719	19	55087468	55087468	G	A	exonic	LILRA2	NA	nonsynonymous SNV	LILRA2:NM_001130917:exon6:c.G1147A:p.G383S,LILRA2:NM_006866:exon6:c.G1147A:p.G383S	exonic	ENSG00000239998	NA	nonsynonymous SNV	ENSG00000239998:ENST00000391737:exon5:c.G1111A:p.G371S,ENSG00000239998:ENST00000251376:exon6:c.G1147A:p.G383S,ENSG00000239998:ENST00000391738:exon6:c.G1147A:p.G383S,ENSG00000239998:ENST00000251377:exon7:c.G1147A:p.G383S	NA	NA	19q13.42	NA	NA	NA	NA	rs151154459	0.0005	0.0005	NA	0.000399361	0.001	NA	0.0014	NA	NA	0.0013	NA	NA	NA	0.0008	0.0013	.	.	0.009	B	0.047	B	0.154	N	1.000	N	-0.07	N	4.4	T	-0.915	T	0.005	T	0.123	-1.503	0.017	-3.32	-0.506	-2.363	4.249	-1.502921	NA	1	0.000581	0.000227	NA	NA	NA	9.3309524
719	13	96239805	96239805	G	A	exonic	DZIP1	NA	nonsynonymous SNV	DZIP1:NM_014934:exon19:c.C2149T:p.P717S,DZIP1:NM_198968:exon20:c.C2206T:p.P736S	exonic	ENSG00000134874	NA	nonsynonymous SNV	ENSG00000134874:ENST00000361156:exon17:c.C2149T:p.P717S,ENSG00000134874:ENST00000347108:exon18:c.C2206T:p.P736S,ENSG00000134874:ENST00000361396:exon19:c.C2149T:p.P717S,ENSG00000134874:ENST00000376829:exon20:c.C2206T:p.P736S	Score=265;Name=lod=16	NA	13q32.1	NA	NA	NA	NA	rs11070136	0.28	0.28	0.261	0.26877	0.3618	0.1558	0.2248	0.3207	0.2505	0.36	0.14	0.28	0.33	0.3003	0.36	0.5	T	0.005	B	0.008	B	0.026	N	1.000	P	1.385	L	1.46	T	-0.935	T	0.000	T	0.062	-1.61	0.013	2.63	1.244	0.739	4.96	-1.609554	NA	0.25	0.340349	0.300272	ID=COSM147707;OCCURENCE=1(stomach)	0.261	NA	9.3308844
719	10	70968613	70968613	C	A	exonic	SUPV3L1	NA	nonsynonymous SNV	SUPV3L1:NM_003171:exon15:c.C2183A:p.A728E	exonic	ENSG00000156502	NA	nonsynonymous SNV	ENSG00000156502:ENST00000359655:exon15:c.C2183A:p.A728E	NA	NA	10q22.1	Score=764;Name=V$PAX5_01	NA	NA	NA	rs200900544	0.0005	0.0005	NA	0.000199681	0.001	NA	NA	NA	NA	0.0013	NA	NA	NA	0.0007	0.0013	0.39	T	0.012	B	0.01	B	0.989	N	1.000	N	0.895	L	1.58	T	-0.999	T	0.041	T	0.191	-1.952	0.007	-2.32	-0.391	-0.259	2.626	-1.951546	NA	0.96	0.000814	0.000227	NA	NA	NA	9.3308194
719	1	212911836	212911836	T	C	exonic	NSL1	NA	nonsynonymous SNV	NSL1:NM_015471:exon6:c.A760G:p.M254V	exonic	ENSG00000117697	NA	nonsynonymous SNV	ENSG00000117697:ENST00000366975:exon4:c.A637G:p.M213V,ENSG00000117697:ENST00000366977:exon6:c.A760G:p.M254V	NA	NA	1q32.3	NA	Name=NRSF	Name=35	NA	rs15702	0.61	0.61	0.624	0.607428	0.6859	0.5308	0.4438	0.6513	0.6626	0.68	0.52	0.51	0.67	0.6402	0.68	1	T	0.0	B	0.0	B	0.186	N	1.000	P	-1.04	N	1.86	T	-0.969	T	0.000	T	0.023	-2.58	0.003	-10.5	-2.672	-3.546	1.497	-2.579856	NA	1	0.676512	0.682478	NA	0.659	NA	9.3307214
719	4	144920596	144920596	G	A	exonic	GYPB	NA	nonsynonymous SNV	GYPB:NM_002100:exon3:c.C143T:p.T48M	exonic	ENSG00000250361	NA	nonsynonymous SNV	ENSG00000250361:ENST00000513128:exon2:c.C44T:p.T15M,ENSG00000250361:ENST00000283126:exon3:c.C143T:p.T48M,ENSG00000250361:ENST00000429670:exon3:c.C143T:p.T48M,ENSG00000250361:ENST00000502664:exon3:c.C143T:p.T48M	NA	NA	4q31.21	NA	NA	NA	NA	rs7683365	0.24	0.24	0.216	0.235224	0.339	0.0347	0.3444	0.1853	0.3252	0.32	0.04	0.36	0.26	0.3457	0.36	0.22	T	0.002	B	0.0	B	0.916	N	1.000	P	.	.	3.07	T	-0.908	T	0.000	T	0.215	1.18	9.8	-3.31	-1.595	-5.841	1.086	1.180374	NA	0.11	0.318446	0.193083	NA	0.312	NA	9.3301874
719	1	150131687	150131687	C	T	exonic	PLEKHO1	NA	nonsynonymous SNV	PLEKHO1:NM_016274:exon6:c.C1199T:p.P400L	exonic	ENSG00000023902	NA	nonsynonymous SNV	ENSG00000023902:ENST00000025469:exon5:c.C1097T:p.P366L,ENSG00000023902:ENST00000369126:exon5:c.C650T:p.P217L,ENSG00000023902:ENST00000369124:exon6:c.C1199T:p.P400L	NA	NA	1q21.2	Score=837;Name=V$GRE_C	Name=Pol2-4H8,c-Fos	NA	NA	rs150382228	0.0009	0.0009	NA	0.000399361	0.001	NA	0.0014	NA	NA	0.0013	NA	0.0028	NA	0.0011	0.0028	0.32	T	0.063	B	0.016	B	0.999	N	1.000	N	0	N	1.06	T	-0.981	T	0.022	T	0.146	1.568	11.2	-0.792	0.016	0.552	13.372	1.567933	1.567933	0.12	0.001163	0	NA	NA	NA	9.3300704
719	10	126172791	126172791	G	A	exonic	LHPP	NA	nonsynonymous SNV	LHPP:NM_001167880:exon2:c.G209A:p.R70K,LHPP:NM_022126:exon2:c.G209A:p.R70K	exonic	ENSG00000107902	NA	nonsynonymous SNV	ENSG00000107902:ENST00000368839:exon2:c.G209A:p.R70K,ENSG00000107902:ENST00000368842:exon2:c.G209A:p.R70K,ENSG00000107902:ENST00000392757:exon2:c.G209A:p.R70K	NA	NA	10q26.13	NA	NA	NA	NA	rs148962333	0.0005	0.0005	NA	0.000199681	0.001	NA	NA	NA	NA	0.0013	NA	NA	NA	0.0009	0.0017	0.4	T	0.008	B	0.009	B	0.664	N	1.000	N	1.02	L	1.67	T	-1.021	T	0.045	T	0.165	0.167	4.897	-7.11	-1.870	-0.129	8.011	0.166709	NA	0.38	0.001744	0.000227	NA	NA	NA	9.3296894
719	1	156641537	156641537	C	T	exonic	NES	NA	nonsynonymous SNV	NES:NM_006617:exon4:c.G2443A:p.V815I	exonic	ENSG00000132688	NA	nonsynonymous SNV	ENSG00000132688:ENST00000368223:exon4:c.G2443A:p.V815I	NA	NA	1q23.1	NA	NA	NA	NA	rs951781	0.21	0.21	0.194	0.204273	0.3439	0.12	0.2738	0.0363	0.3252	0.35	0.13	0.29	0.04	0.3053	0.35	0.18	T	0.026	B	0.001	B	0.393	N	1.000	P	1.175	L	-1.96	D	-0.860	T	0.216	T	0.007	1.624	11.39	-4.93	-0.441	-1.666	7.434	1.624057	1.624057	0.41	0.354651	0.091012	ID=COSM146641;OCCURENCE=1(stomach)	0.348	NA	9.3294824
719	19	51228634	51228634	G	A	exonic	CLEC11A	NA	synonymous SNV	CLEC11A:NM_002975:exon4:c.G882A:p.E294E	exonic	ENSG00000105472	NA	nonsynonymous SNV	ENSG00000105472:ENST00000599973:exon4:c.G931A:p.E311K	Score=613;Name=lod=415	NA	19q13.33	Score=810;Name=V$HMX1_01	Name=E2F6,Pol2,GABP,E2F6_(H-50)	Name=9	NA	rs11084024	0.17	0.17	0.142	0.151558	0.2505	0.0506	0.1182	0.1853	0.1319	0.27	0.06	0.12	0.19	0.2029	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.184185	NA	0	0.217427	0.181652	NA	0.188	NA	9.329173
719	21	32127470	32127470	T	C	exonic	KRTAP21-1	NA	nonsynonymous SNV	KRTAP21-1:NM_181619:exon1:c.A227G:p.Y76C	exonic	ENSG00000187005	NA	nonsynonymous SNV	ENSG00000187005:ENST00000335093:exon1:c.A227G:p.Y76C	Score=389;Name=lod=51	NA	21q22.11	NA	NA	NA	NA	rs148348278	NA	NA	NA	0.00199681	NA	NA	NA	NA	0.0102	NA	NA	NA	NA	0.003	0.0014	0	D	0.008	B	0.006	B	.	.	1.000	N	.	.	.	.	-1.003	T	0.073	T	0.324	0.099	4.533	0.614	0.237	0.103	5.775	0.099027	NA	0	0.001395	0.000227	NA	NA	NA	9.3289384
719	16	84520339	84520339	T	C	exonic	TLDC1	NA	nonsynonymous SNV	TLDC1:NM_020947:exon5:c.A856G:p.I286V	exonic	ENSG00000140950	NA	nonsynonymous SNV	ENSG00000140950:ENST00000343629:exon5:c.A856G:p.I286V,ENSG00000140950:ENST00000535580:exon6:c.A775G:p.I259V	NA	NA	16q24.1	NA	NA	NA	NA	rs141459520	0.0005	0.0005	NA	0.000599042	0.003	NA	NA	NA	NA	0.0013	NA	NA	NA	0.0009	0.0013	0.03	D	0.071	B	0.107	B	0.011	N	1.000	N	1.44	L	0.96	T	-0.983	T	0.095	T	0.227	-0.121	3.41	1.75	0.016	1.422	8.882	-0.120503	NA	0.17	0.001279	0.000455	NA	NA	NA	9.3281544
719	9	100983329	100983329	G	A	exonic	TBC1D2	NA	nonsynonymous SNV	TBC1D2:NM_001267571:exon6:c.C1160T:p.A387V,TBC1D2:NM_018421:exon6:c.C1160T:p.A387V	exonic	ENSG00000095383	NA	nonsynonymous SNV	ENSG00000095383:ENST00000342112:exon5:c.C506T:p.A169V,ENSG00000095383:ENST00000375064:exon6:c.C1160T:p.A387V,ENSG00000095383:ENST00000375066:exon6:c.C1160T:p.A387V	NA	NA	9q22.33	NA	NA	NA	NA	rs61753563	0.02	0.02	0.021	0.0225639	NA	NA	0.0014	0.0847	NA	NA	NA	0.0028	0.09	0.0053	0.09	0.18	T	0.006	B	0.001	B	0.165	N	1.000	P	-0.29	N	3.1	T	-0.998	T	0.001	T	0.022	0.401	6.179	-5.98	-0.925	-1.009	7.336	0.40121	NA	0.37	0.000349	0.051294	NA	0.014	NA	9.3276844
719	6	66115146	66115146	C	T	exonic	EYS	NA	nonsynonymous SNV	EYS:NM_198283:exon5:c.G977A:p.S326N,EYS:NM_001142800:exon6:c.G977A:p.S326N,EYS:NM_001142801:exon6:c.G977A:p.S326N	exonic	ENSG00000188107	NA	nonsynonymous SNV	ENSG00000188107:ENST00000370616:exon3:c.G977A:p.S326N,ENSG00000188107:ENST00000342421:exon4:c.G977A:p.S326N,ENSG00000188107:ENST00000370618:exon6:c.G977A:p.S326N,ENSG00000188107:ENST00000370621:exon6:c.G977A:p.S326N,ENSG00000188107:ENST00000393380:exon6:c.G977A:p.S326N,ENSG00000188107:ENST00000503581:exon6:c.G977A:p.S326N	NA	NA	6q12	NA	NA	NA	NA	rs112822256	0.0023	0.0023	0.003	0.00219649	0.003	NA	NA	0.0053	0.001	0.0026	NA	NA	0.01	0.0018	0.011	0.03	D	0.001	B	0.001	B	.	.	1.000	N	0.6	N	-1.61	D	-0.827	T	0.246	T	0.045	0.984	9.018	-1.66	-0.679	0.103	6.756	0.984254	NA	0.01	0.001279	0.006128	NA	0.007	NA	9.3272544
719	14	55509919	55509919	G	A	exonic	SOCS4	NA	nonsynonymous SNV	SOCS4:NM_080867:exon2:c.G160A:p.G54S,SOCS4:NM_199421:exon3:c.G160A:p.G54S	exonic	ENSG00000180008	NA	nonsynonymous SNV	ENSG00000180008:ENST00000339298:exon2:c.G160A:p.G54S,ENSG00000180008:ENST00000395472:exon2:c.G160A:p.G54S,ENSG00000180008:ENST00000555846:exon3:c.G160A:p.G54S	NA	NA	14q22.3	NA	NA	NA	NA	rs146421724	0.0009	0.0009	NA	0.00179712	0.003	NA	0.0086	NA	NA	0.0013	NA	0.0028	NA	0.0014	0.0028	0.15	T	0.0	B	0.0	B	0.310	N	1.000	N	0	N	1.48	T	-1.024	T	0.035	T	0.029	-0.395	2.148	-4.77	-1.350	-0.433	6.006	-0.395268	NA	0.2	0.001744	0	NA	NA	NA	9.3271894
719	20	44238741	44238741	T	G	exonic	WFDC9	NA	nonsynonymous SNV	WFDC9:NM_147198:exon3:c.A80C:p.N27T	exonic	ENSG00000180205	NA	nonsynonymous SNV	ENSG00000180205:ENST00000326000:exon3:c.A80C:p.N27T	NA	NA	20q13.12	NA	NA	NA	NA	rs2245898	0.39	0.39	0.383	0.393371	0.325	0.4276	0.3545	0.4175	0.4233	0.31	0.43	0.39	0.47	0.3539	0.47	0.65	T	0.0	B	0.0	B	0.009	N	1.000	P	.	.	1.52	T	-0.969	T	0.000	T	0.012	-0.453	1.9	-6.08	-1.726	-1.986	4.197	-0.453305	NA	0.75	0.32814	0.394008	ID=COSM149186;OCCURENCE=1(stomach)	0.297	NA	9.3262934
719	19	10577843	10577843	C	A	exonic	PDE4A	NA	nonsynonymous SNV	PDE4A:NM_006202:exon10:c.C1490A:p.A497E,PDE4A:NM_001111307:exon15:c.C2207A:p.A736E,PDE4A:NM_001111308:exon15:c.C2129A:p.A710E,PDE4A:NM_001111309:exon15:c.C2024A:p.A675E,PDE4A:NM_001243121:exon17:c.C2141A:p.A714E	exonic	ENSG00000065989	NA	nonsynonymous SNV	ENSG00000065989:ENST00000344979:exon10:c.C1490A:p.A497E,ENSG00000065989:ENST00000293683:exon15:c.C2129A:p.A710E,ENSG00000065989:ENST00000352831:exon15:c.C2207A:p.A736E,ENSG00000065989:ENST00000440014:exon15:c.C2024A:p.A675E,ENSG00000065989:ENST00000380702:exon16:c.C2141A:p.A714E,ENSG00000065989:ENST00000592685:exon17:c.C2141A:p.A714E	NA	NA	19p13.2	NA	NA	NA	NA	rs1051738	0.18	0.18	0.186	0.188299	0.1521	0.1389	0.1369	0.3033	0.1575	0.16	0.11	0.17	0.29	0.1765	0.29	0.44	T	0.849	P	0.438	B	.	.	1.000	P	0	N	-0.02	T	-1.097	T	0.000	T	0.058	2.082	12.92	-4.39	-0.449	-1.502	1.544	2.081865	2.081865	0.03	0.178605	0.285747	ID=COSM148506;OCCURENCE=1(stomach)	0.152	NA	9.3261284
719	2	103335178	103335178	C	T	exonic	MFSD9	NA	nonsynonymous SNV	MFSD9:NM_032718:exon6:c.G1126A:p.A376T	exonic	ENSG00000135953	NA	nonsynonymous SNV	ENSG00000135953:ENST00000258436:exon6:c.G1126A:p.A376T	NA	NA	2q12.1	NA	NA	NA	NA	rs34096572	0.02	0.02	0.018	0.0199681	0.001	NA	0.0058	0.0719	NA	NA	NA	0.01	0.07	0.0054	0.07	0.44	T	0.356	B	0.119	B	0.602	N	1.000	N	0.55	N	0.32	T	-1.096	T	0.009	T	0.027	0.646	7.469	-5.16	-1.433	-0.437	7.441	0.646291	NA	0.47	0.000814	0.053109	NA	0.029	NA	9.3261194
720	12	32994073	32994073	G	A	exonic	PKP2	NA	nonsynonymous SNV	PKP2:NM_001005242:exon6:c.C1445T:p.T482M,PKP2:NM_004572:exon7:c.C1577T:p.T526M	exonic	ENSG00000057294	NA	nonsynonymous SNV	ENSG00000057294:ENST00000340811:exon6:c.C1445T:p.T482M,ENSG00000057294:ENST00000070846:exon7:c.C1577T:p.T526M	NA	NA	12p11.21	NA	NA	NA	NA	rs146882581	0.0023	0.0023	0.002	0.00379393	0.005	NA	0.0029	0.0091	NA	0.0026	NA	NA	0.01	0.0023	0.01	0.12	T	0.198	B	0.032	B	0.002	N	1.000	N	1.56	L	-1.07	T	-0.835	T	0.225	T	0.278	-0.137	3.327	2.01	0.068	0.502	8.816	-0.137495	NA	0.08	0.002326	0.006355	NA	NA	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000038172.1;CLNDSDB=.;CLNDSDBID=.	9.3237074
720	9	136340625	136340625	C	T	exonic	SLC2A6	NA	nonsynonymous SNV	SLC2A6:NM_001145099:exon5:c.G671A:p.R224Q,SLC2A6:NM_017585:exon5:c.G671A:p.R224Q	exonic	ENSG00000160326	NA	nonsynonymous SNV	ENSG00000160326:ENST00000371897:exon5:c.G671A:p.R224Q,ENSG00000160326:ENST00000371899:exon5:c.G671A:p.R224Q	Score=426;Name=lod=72	NA	9q34.2	NA	NA	NA	NA	rs147854160	NA	NA	NA	0.000798722	0.003	NA	0.0014	NA	NA	NA	NA	NA	NA	0.0026	0.0051	0.37	T	0.021	B	0.003	B	0.042	N	0.996	N	-0.525	N	-0.84	T	-1.018	T	0.092	T	0.024	0.598	7.225	0.644	0.206	1.189	6.988	0.598187	NA	0.8	0.005117	0.00091	NA	NA	NA	9.3226164
720	2	220355529	220355529	A	G	exonic	SPEG	NA	nonsynonymous SNV	SPEG:NM_005876:exon38:c.A9236G:p.H3079R	exonic	ENSG00000072195	NA	nonsynonymous SNV	ENSG00000072195:ENST00000312358:exon38:c.A9236G:p.H3079R	Score=558;Name=lod=247	NA	2q35	Score=874;Name=V$USF_01	NA	NA	NA	rs12464085	0.35	0.35	0.327	0.400958	0.331	0.1736	0.3905	0.5696	0.4867	0.32	0.19	0.4	0.56	0.3552	0.56	1	T	0.0	B	0.0	B	0.099	N	0.000	P	0.14	N	-0.07	T	-0.944	T	0.000	T	0.053	0.871	8.533	-0.076	-0.187	1.359	11.281	0.871477	NA	1	0.325077	0.517032	NA	0.326	NA	9.3220564
720	11	77409568	77409568	T	C	exonic	RSF1	NA	synonymous SNV	RSF1:NM_016578:exon7:c.A2679G:p.P893P	exonic	ENSG00000048649	NA	synonymous SNV	ENSG00000048649:ENST00000531026:exon1:c.A6G:p.P2P,ENSG00000048649:ENST00000480887:exon2:c.A1923G:p.P641P,ENSG00000048649:ENST00000526324:exon3:c.A2082G:p.P694P,ENSG00000048649:ENST00000360355:exon6:c.A2586G:p.P862P,ENSG00000048649:ENST00000308488:exon7:c.A2679G:p.P893P	NA	NA	11q14.1	NA	NA	NA	NA	rs4945203	0.19	0.19	0.179	0.196885	0.0984	0.1736	0.2161	0.3298	0.1288	0.1	0.19	0.19	0.35	0.1502	0.35	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.987	T	0.000	T	.	0.916	8.729	-8.3	-2.263	-1.814	2.551	0.916226	NA	NA	0.096925	0.305227	NA	0.225	NA	9.3211416
720	2	238257013	238257013	G	A	exonic	COL6A3	NA	synonymous SNV	COL6A3:NM_057166:exon27:c.C5124T:p.F1708F,COL6A3:NM_057167:exon29:c.C6327T:p.F2109F,COL6A3:NM_004369:exon30:c.C6945T:p.F2315F	exonic	ENSG00000163359	NA	synonymous SNV	ENSG00000163359:ENST00000472056:exon27:c.C5124T:p.F1708F,ENSG00000163359:ENST00000409809:exon28:c.C6327T:p.F2109F,ENSG00000163359:ENST00000346358:exon29:c.C6345T:p.F2115F,ENSG00000163359:ENST00000347401:exon29:c.C6342T:p.F2114F,ENSG00000163359:ENST00000353578:exon29:c.C6327T:p.F2109F,ENSG00000163359:ENST00000295550:exon30:c.C6945T:p.F2315F	Score=383;Name=lod=48	NA	2q37.3	Score=993;Name=V$STAT3_02	Name=MafK_(SC-477),MafK_(ab50322)	NA	NA	rs2646265	0.1	0.1	0.083	0.10643	0.1302	0.0516	0.1729	0.0817	0.1247	0.13	0.04	0.16	0.09	0.11	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.972586	NA	NA	0.10593	0.081707	NA	0.087	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000080980.3;CLNDSDB=.;CLNDSDBID=.	9.3205366
720	19	57649900	57649900	C	T	exonic	ZIM3	NA	nonsynonymous SNV	ZIM3:NM_052882:exon3:c.G82A:p.E28K	exonic	ENSG00000141946	NA	nonsynonymous SNV	ENSG00000141946:ENST00000269834:exon3:c.G82A:p.E28K	NA	NA	19q13.43	NA	NA	NA	NA	rs2370134	0.16	0.16	0.124	0.138978	0.161	0.247	0.2161	0.0144	0.1186	0.15	0.27	0.19	0.03	0.17	0.27	0.01	D	0.611	P	0.048	B	.	.	1.000	P	1.67	L	4.68	T	-0.907	T	0.000	T	0.062	1.474	10.87	-1.33	0.277	-2.790	0.233	1.473521	1.473521	0.08	0.182442	0.04857	NA	0.058	NA	9.3198914
720	2	116548675	116548675	G	A	exonic	DPP10	NA	nonsynonymous SNV	DPP10:NM_001004360:exon18:c.G1529A:p.S510N,DPP10:NM_001178034:exon18:c.G1562A:p.S521N,DPP10:NM_001178037:exon18:c.G1538A:p.S513N,DPP10:NM_020868:exon18:c.G1550A:p.S517N,DPP10:NM_001178036:exon19:c.G1400A:p.S467N	exonic	ENSG00000175497	NA	nonsynonymous SNV	ENSG00000175497:ENST00000310323:exon18:c.G1529A:p.S510N,ENSG00000175497:ENST00000393147:exon18:c.G1562A:p.S521N,ENSG00000175497:ENST00000410059:exon18:c.G1550A:p.S517N,ENSG00000175497:ENST00000409163:exon19:c.G1400A:p.S467N	Score=484;Name=lod=124	NA	2q14.1	NA	NA	NA	NA	rs13421193	0.03	0.03	0.039	0.0391374	0.001	NA	0.0101	0.1422	NA	NA	NA	0.0028	0.13	0.0121	0.13	1	T	0.001	B	0.001	B	0.020	N	1.000	N	-0.205	N	1.54	T	-0.992	T	0.000	T	0.013	0.72	7.83	2.67	0.394	-0.263	7.229	0.719671	NA	0.48	0.000931	0.121026	NA	0.072	NA	9.3193024
720	1	152276149	152276149	C	T	exonic	FLG	NA	nonsynonymous SNV	FLG:NM_002016:exon3:c.G11213A:p.R3738H	exonic	ENSG00000143631	NA	nonsynonymous SNV	ENSG00000143631:ENST00000368799:exon3:c.G11213A:p.R3738H	NA	NA	1q21.3	NA	NA	NA	NA	rs77422831	0.26	0.26	0.202	0.286941	0.1421	0.5804	0.3919	0.0113	0.4315	0.15	0.58	0.32	0.02	0.2288	0.58	0.27	T	0.751	P	0.065	B	.	.	1.000	P	-0.505	N	4.68	T	-0.947	T	0.001	T	0.033	1.563	11.18	-2.2	-0.570	-2.253	4.171	1.563264	1.563264	0.3	0.144186	0.036995	NA	0.145	NA	9.3182474
720	14	90420961	90420961	G	A	exonic	EFCAB11	NA	nonsynonymous SNV	EFCAB11:NM_145231:exon1:c.C44T:p.A15V	exonic	ENSG00000140025	NA	nonsynonymous SNV	ENSG00000140025:ENST00000316738:exon1:c.C44T:p.A15V,ENSG00000140025:ENST00000538485:exon1:c.C44T:p.A15V,ENSG00000140025:ENST00000556639:exon1:c.C44T:p.A15V	NA	NA	14q32.11	NA	Name=GABP,TAF1,GATA-1,PU.1,Pol2,Pol2(phosphoS2),ELF1_(SC-631),BAF155,Sin3Ak-20,Pol2-4H8,HEY1,TBP	NA	NA	rs35435801	0.03	0.03	0.032	0.0397364	0.002	NA	0.0159	0.1407	NA	NA	NA	0.02	0.11	0.0129	0.13	0.05	D	0.005	B	0.003	B	0.954	N	0.999	P	0.49	N	3.05	T	-1.007	T	0.000	T	0.034	1.724	11.72	0.256	0.142	0.384	7.462	1.723768	1.723768	0.9	0.000465	0.128688	NA	0.014	NA	9.3179684
720	1	117122288	117122288	G	C	exonic	IGSF3	NA	nonsynonymous SNV	IGSF3:NM_001007237:exon10:c.C3060G:p.D1020E,IGSF3:NM_001542:exon11:c.C3120G:p.D1040E	exonic	ENSG00000143061	NA	nonsynonymous SNV	ENSG00000143061:ENST00000318837:exon10:c.C3120G:p.D1040E,ENSG00000143061:ENST00000369486:exon10:c.C3060G:p.D1020E,ENSG00000143061:ENST00000369483:exon11:c.C3120G:p.D1040E	NA	NA	1p13.1	NA	NA	NA	NA	rs647711	0.28	0.28	0.15	0.261581	0.4324	0.1101	0.3141	0.1732	0.3241	0.43	0.13	0.31	0.19	0.2949	0.43	0.83	T	0.0	B	0.0	B	0.638	N	1.000	P	0	N	4.08	T	-0.902	T	0.001	T	0.048	-2.465	0.003	-5.35	-2.572	-1.686	7.115	-2.465162	NA	1	0.288372	0.134362	ID=COSM1333058,COSM1333059;OCCURENCE=1(large_intestine)	0.058	NA	9.3176614
720	19	55143083	55143083	T	C	exonic	LILRB1	NA	nonsynonymous SNV	LILRB1:NM_001081637:exon4:c.T203C:p.L68P,LILRB1:NM_001081638:exon4:c.T203C:p.L68P,LILRB1:NM_001081639:exon4:c.T203C:p.L68P,LILRB1:NM_006669:exon5:c.T203C:p.L68P	exonic	ENSG00000104972	NA	nonsynonymous SNV	ENSG00000104972:ENST00000396315:exon3:c.T203C:p.L68P,ENSG00000104972:ENST00000396317:exon3:c.T203C:p.L68P,ENSG00000104972:ENST00000396321:exon3:c.T203C:p.L68P,ENSG00000104972:ENST00000418536:exon3:c.T203C:p.L68P,ENSG00000104972:ENST00000421584:exon3:c.T203C:p.L68P,ENSG00000104972:ENST00000427581:exon3:c.T311C:p.L104P,ENSG00000104972:ENST00000448689:exon3:c.T203C:p.L68P,ENSG00000104972:ENST00000324602:exon4:c.T203C:p.L68P,ENSG00000104972:ENST00000396327:exon4:c.T203C:p.L68P,ENSG00000104972:ENST00000396332:exon4:c.T203C:p.L68P,ENSG00000104972:ENST00000434867:exon4:c.T203C:p.L68P,ENSG00000104972:ENST00000396331:exon5:c.T203C:p.L68P	NA	NA	19q13.42	NA	NA	NA	NA	rs1061679	0.46	0.46	0.442	0.468251	0.3032	0.5982	0.4899	0.618	0.2863	0.29	0.58	0.44	0.58	0.3925	0.58	0.86	T	0.0	B	0.001	B	0.005	N	1.000	P	-0.83	N	5.84	T	-0.974	T	0.000	T	0.087	-3.114	0.001	-3.16	-1.373	-3.288	0.354	-3.114359	NA	1	0.321047	0.581253	NA	0.543	NA	9.3165864
720	11	6524072	6524072	A	C	exonic	DNHD1	NA	nonsynonymous SNV	DNHD1:NM_173589:exon3:c.A836C:p.Q279P,DNHD1:NM_144666:exon4:c.A836C:p.Q279P	exonic	ENSG00000179532	NA	nonsynonymous SNV	ENSG00000179532:ENST00000527990:exon2:c.A836C:p.Q279P,ENSG00000179532:ENST00000354685:exon3:c.A836C:p.Q279P,ENSG00000179532:ENST00000254579:exon4:c.A836C:p.Q279P	NA	NA	11p15.4	NA	NA	NA	NA	rs11605196	0.1	0.1	0.091	0.0996406	0.1789	0.0169	0.147	0.0408	0.1493	0.19	0.02	0.13	0.05	0.1485	0.19	0.3	T	0.838	P	0.367	B	0.150	N	1.000	P	1.245	L	2.65	T	-1.034	T	0.000	T	0.425	1.627	11.4	4.52	0.971	0.115	8.234	1.627054	1.627054	0.02	0.19041	0.062926	NA	0.203	NA	9.3155234
721	19	55715309	55715309	C	T	exonic	PTPRH	NA	nonsynonymous SNV	PTPRH:NM_002842:exon5:c.G727A:p.V243I	exonic	ENSG00000080031	NA	nonsynonymous SNV	ENSG00000080031:ENST00000376350:exon5:c.G727A:p.V243I	Score=284;Name=lod=19	NA	19q13.42	NA	NA	NA	NA	rs45535035	0.13	0.13	0.126	0.124401	0.1978	0.0327	0.0994	0.1558	0.1186	0.21	0.02	0.12	0.13	0.1433	0.21	1	T	0.74	P	0.088	B	0.953	N	0.002	P	0.125	N	0.17	T	-1.097	T	0.000	T	0.02	-1.345	0.029	2.49	0.582	-0.050	6.898	-1.344619	NA	0.54	0.177442	0.16296	NA	0.138	NA	9.3147914
721	12	57132236	57132236	C	T	exonic	PRIM1	NA	nonsynonymous SNV	PRIM1:NM_000946:exon11:c.G1126A:p.V376I	exonic	ENSG00000198056	NA	nonsynonymous SNV	ENSG00000198056:ENST00000338193:exon11:c.G1126A:p.V376I	Score=456;Name=lod=95	NA	12q13.3	NA	NA	NA	NA	rs143246089	0.0037	0.0037	0.004	0.00259585	0.004	NA	0.0101	0.0008	0.001	0.004	NA	0.01	0.002	0.0067	0.01	0.2	T	0.0	B	0.0	B	0.448	N	1.000	N	-1.1	N	0.96	T	-1.029	T	0.025	T	0.011	1.107	9.516	2.0	0.349	-0.217	6.071	1.106991	NA	0.53	0.008427	0.00134	NA	NA	NA	9.3142064
721	7	6370406	6370406	C	T	exonic	FAM220A	NA	nonsynonymous SNV	FAM220A:NM_001037163:exon2:c.G380A:p.R127Q	exonic	ENSG00000178397	NA	nonsynonymous SNV	ENSG00000178397:ENST00000313324:exon2:c.G380A:p.R127Q	NA	NA	7p22.1	NA	NA	NA	NA	rs3750040	0.69	0.69	0.673	0.723043	0.4543	0.8839	0.6571	0.8669	0.6861	0.45	0.88	0.63	0.85	0.5882	0.88	0.6	T	0.994	D	0.662	P	0.557	U	1.000	P	0.69	N	3.1	T	-1.039	T	0.000	T	0.101	0.819	8.298	4.23	1.144	0.772	8.367	0.819362	NA	0.61	0.477326	0.814798	NA	0.688	NA	9.3135074
721	14	21792811	21792811	G	A	exonic	RPGRIP1	NA	synonymous SNV	RPGRIP1:NM_020366:exon14:c.G1797A:p.P599P	exonic	ENSG00000092200	NA	nonsynonymous SNV	ENSG00000092200:ENST00000307974:exon1:c.G23A:p.R8H,ENSG00000092200:ENST00000555489:exon2:c.G139A:p.V47I	NA	NA	14q11.2	Score=763;Name=V$MYOGNF1_01	NA	NA	NA	rs9322965	0.16	0.16	0.174	0.184704	0.2336	0.0188	0.1427	0.2421	0.2577	0.24	0.01	0.15	0.23	0.2126	0.24	0.19	T	0.001	B	0.001	B	.	.	1.000	P	.	.	-1.27	T	-1.096	T	0.000	T	.	0.9	8.657	3.17	0.534	-0.363	2.633	0.899673	NA	0.2	0.240772	0.211607	NA	0.181	CLINSIG=untested;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000086242.1;CLNDSDB=.;CLNDSDBID=.	9.313028
721	9	116060124	116060124	T	C	exonic	RNF183	NA	nonsynonymous SNV	RNF183:NM_145051:exon2:c.A341G:p.Q114R	exonic	ENSG00000165188	NA	nonsynonymous SNV	ENSG00000165188:ENST00000478815:exon1:c.A341G:p.Q114R,ENSG00000165188:ENST00000416588:exon2:c.A341G:p.Q114R,ENSG00000165188:ENST00000441031:exon2:c.A341G:p.Q114R,ENSG00000165188:ENST00000297894:exon4:c.A341G:p.Q114R	Score=514;Name=lod=163	NA	9q32	Score=813;Name=V$TAXCREB_01	NA	NA	NA	rs3750534	0.37	0.37	0.398	0.408546	0.3181	0.4246	0.2061	0.4486	0.5746	0.33	0.43	0.23	0.48	0.3648	0.49	0.57	T	.	.	.	.	0.192	N	1.000	P	.	.	2.35	T	-0.938	T	0.000	T	0.016	-1.472	0.018	3.16	0.318	0.059	4.768	-1.471647	NA	NA	0.337653	0.427337	NA	0.42	NA	9.3127804
721	11	125617606	125617606	G	A	exonic	PATE1	NA	nonsynonymous SNV	PATE1:NM_138294:exon4:c.G136A:p.V46I	exonic	ENSG00000171053	NA	nonsynonymous SNV	ENSG00000171053:ENST00000437148:exon3:c.G100A:p.V34I,ENSG00000171053:ENST00000305738:exon4:c.G136A:p.V46I	NA	NA	11q24.2	NA	NA	NA	NA	rs537916	0.27	0.27	0.27	0.274161	0.334	0.2282	0.2925	0.2073	0.3374	0.34	0.24	0.28	0.2	0.3327	0.35	0.33	T	0.004	B	0.008	B	0.923	N	1.000	P	1.15	L	1.66	T	-0.974	T	0.000	T	0.045	0.651	7.495	-6.17	-1.459	-1.626	13.537	0.651394	NA	0	0.35392	0.229441	NA	0.391	NA	9.3127134
721	19	9801668	9801668	T	C	exonic	ZNF812	NA	nonsynonymous SNV	ZNF812:NM_001199814:exon6:c.A511G:p.R171G	exonic	ENSG00000224689	NA	nonsynonymous SNV	ENSG00000224689:ENST00000457674:exon5:c.A511G:p.R171G	NA	NA	19p13.2	NA	NA	NA	NA	rs113307466	0.05	0.05	0.055	0.0644968	0.001	0.0159	0.0216	0.2186	0.002	0.0013	0.01	0.02	0.2	0.0201	0.2	1	T	0.0	B	0.0	B	.	.	1.000	P	-2.58	N	2.03	T	-0.999	T	0.000	T	0.097	-2.257	0.004	-2.83	-1.714	0.296	9.803	-2.256732	NA	1	NA	NA	NA	0.072	NA	9.3122334
721	5	169031150	169031150	T	C	exonic	SPDL1	NA	nonsynonymous SNV	SPDL1:NM_017785:exon12:c.T1757C:p.L586S	exonic	ENSG00000040275	NA	nonsynonymous SNV	ENSG00000040275:ENST00000265295:exon12:c.T1757C:p.L586S	Score=325;Name=lod=28	NA	5q35.1	Score=843;Name=V$STAT5B_01	NA	NA	NA	rs3777084	0.65	0.65	0.644	0.656749	0.672	0.7331	0.5965	0.5893	0.6963	0.69	0.72	0.6	0.57	0.6613	0.72	0.89	T	0.0	B	0.0	B	0.122	N	1.000	P	-1.79	N	1.72	T	-0.970	T	0.000	T	0.017	-1.57	0.015	4.05	0.402	1.392	5.756	-1.570291	NA	1	0.690116	0.591239	NA	0.587	NA	9.3099174
721	3	100364914	100364914	G	A	exonic	GPR128	NA	nonsynonymous SNV	GPR128:NM_032787:exon9:c.G1072A:p.D358N	exonic	ENSG00000144820	NA	nonsynonymous SNV	ENSG00000144820:ENST00000475887:exon3:c.G187A:p.D63N,ENSG00000144820:ENST00000273352:exon9:c.G1072A:p.D358N	NA	NA	3q12.2	NA	NA	NA	NA	rs61742836	0.01	0.01	0.01	0.00419329	0.0159	NA	0.0043	0.0015	NA	0.01	NA	0.0028	0.01	0.0049	0.011	0.75	T	0.001	B	0.002	B	0.866	N	1.000	N	1.155	L	1.44	T	-0.992	T	0.044	T	0.006	1.211	9.917	-2.94	-0.446	-1.582	7.078	1.211071	NA	0.29	0.007442	0.001135	NA	0.007	NA	9.3050914
722	22	38205989	38205989	T	C	exonic	GCAT	NA	nonsynonymous SNV	GCAT:NM_001171690:exon2:c.T230C:p.L77S	exonic	ENSG00000100116	NA	nonsynonymous SNV	ENSG00000100116:ENST00000323205:exon2:c.T230C:p.L77S,ENSG00000100116:ENST00000445195:exon2:c.T230C:p.L77S	NA	NA	22q13.1	NA	Name=Pol2	NA	NA	rs2285178	0.28	0.28	0.26	0.275559	0.332	0.3135	0.3098	0.1014	0.3896	0.33	0.34	0.31	0.11	0.3866	0.34	0	D	0.037	B	0.009	B	.	.	1.000	P	.	.	-1.86	D	-1.068	T	0.000	T	0.075	0.329	5.786	0.006	-0.072	0.213	4.103	0.329321	NA	0	0.31077	0.140263	NA	0.239	NA	9.3039634
722	20	50407502	50407502	A	C	exonic	SALL4	NA	nonsynonymous SNV	SALL4:NM_020436:exon2:c.T1520G:p.L507R	exonic	ENSG00000101115	NA	nonsynonymous SNV	ENSG00000101115:ENST00000217086:exon2:c.T1520G:p.L507R	Score=251;Name=lod=14	NA	20q13.2	NA	NA	NA	NA	rs6126344	0.35	0.35	0.28	0.358826	0.335	0.5962	0.3386	0.1218	0.4734	0.32	0.57	0.36	0.13	0.3506	0.57	0.68	T	0.024	B	0.005	B	0.056	N	0.000	P	1.905	M	2.88	T	-0.966	T	0.000	T	0.084	-0.033	3.845	1.9	0.343	2.155	8.640	-0.033053	NA	0.33	0.343837	0.149796	NA	0.304	NA	9.3038964
722	2	171260797	171260797	A	G	exonic	MYO3B	NA	nonsynonymous SNV	MYO3B:NM_001083615:exon20:c.A2318G:p.E773G,MYO3B:NM_138995:exon20:c.A2318G:p.E773G	exonic	ENSG00000071909	NA	nonsynonymous SNV	ENSG00000071909:ENST00000317935:exon20:c.A2318G:p.E773G,ENSG00000071909:ENST00000334231:exon20:c.A2345G:p.E782G,ENSG00000071909:ENST00000408978:exon20:c.A2318G:p.E773G,ENSG00000071909:ENST00000409044:exon20:c.A2318G:p.E773G,ENSG00000071909:ENST00000484338:exon20:c.A2345G:p.E782G	Score=486;Name=lod=126	NA	2q31.1	NA	NA	NA	NA	rs33962844	0.25	0.25	0.207	0.248403	0.3509	0.2718	0.4251	0.0189	0.3037	0.35	0.25	0.36	0.02	0.3328	0.36	0.2	T	0.005	B	0.021	B	0.024	N	0.778	P	3.02	M	-0.7	T	-1.050	T	0.000	T	0.43	1.062	9.337	-0.056	-0.159	2.485	3.741	1.061972	NA	0.1	0.3481	0.081109	NA	0.167	NA	9.3015334
722	8	144620342	144620342	T	C	exonic	ZC3H3	NA	nonsynonymous SNV	ZC3H3:NM_015117:exon2:c.A1195G:p.S399G	exonic	ENSG00000014164	NA	nonsynonymous SNV	ENSG00000014164:ENST00000262577:exon2:c.A1195G:p.S399G	NA	NA	8q24.3	NA	NA	NA	NA	rs1318196	0.39	0.39	0.386	0.417332	0.3479	0.2133	0.4654	0.5779	0.4479	0.37	0.24	0.44	0.56	0.3672	0.56	1	T	0.0	B	0.0	B	0.010	N	1.000	P	-1.95	N	4.22	T	-0.987	T	0.000	T	0.014	-1.126	0.121	3.82	1.019	1.005	7.957	-1.126009	NA	1	0.316818	0.526782	ID=COSM454139;OCCURENCE=1(breast)	0.355	NA	9.3014154
722	20	31767470	31767470	G	C	exonic	BPIFA2	NA	nonsynonymous SNV	BPIFA2:NM_080574:exon7:c.G706C:p.V236L	exonic	ENSG00000131050	NA	nonsynonymous SNV	ENSG00000131050:ENST00000253362:exon7:c.G706C:p.V236L,ENSG00000131050:ENST00000354932:exon7:c.G706C:p.V236L	NA	NA	20q11.21	NA	NA	NA	NA	rs1075435	0.08	0.08	0.087	0.0926518	0.004	0.0317	0.0231	0.3116	NA	0.01	0.03	0.03	0.29	0.0273	0.29	0.27	T	0.0	B	0.001	B	0.240	N	1.000	P	-0.55	N	3.67	T	-0.902	T	0.000	T	0.014	0.629	7.382	-4.0	-1.413	-0.686	5.819	0.629044	NA	0.04	0.001977	0.245574	NA	0.065	NA	9.3000564
722	3	58410554	58410554	C	T	exonic	PXK	NA	nonsynonymous SNV	PXK:NM_017771:exon18:c.C1604T:p.A535V	exonic	ENSG00000168297	NA	nonsynonymous SNV	ENSG00000168297:ENST00000536660:exon15:c.C1193T:p.A398V,ENSG00000168297:ENST00000383716:exon16:c.C1505T:p.A502V,ENSG00000168297:ENST00000302779:exon17:c.C1553T:p.A518V,ENSG00000168297:ENST00000356151:exon18:c.C1604T:p.A535V	NA	NA	3p14.3	NA	Name=Pol2(phosphoS2)	NA	NA	rs34579268	0.24	0.24	0.252	0.205471	0.3777	0.001	0.2839	0.2141	0.1718	0.37	0.0035	0.31	0.27	0.284	0.37	0.19	T	0.0	B	0.0	B	0.481	N	0.999	P	0.41	N	2.17	T	-0.979	T	0.000	T	0.143	0.87	8.525	-5.16	-0.924	-1.086	11.274	0.869609	NA	0.19	0.372674	0.216069	ID=COSM1599970;OCCURENCE=1(central_nervous_system)	0.312	NA	9.2989594
722	18	66564514	66564514	G	C	exonic	CCDC102B	NA	nonsynonymous SNV	CCDC102B:NM_024781:exon6:c.G1112C:p.R371T,CCDC102B:NM_001093729:exon8:c.G1112C:p.R371T	exonic	ENSG00000150636	NA	nonsynonymous SNV	ENSG00000150636:ENST00000584156:exon5:c.G1112C:p.R371T,ENSG00000150636:ENST00000319445:exon6:c.G1112C:p.R371T,ENSG00000150636:ENST00000360242:exon6:c.G1112C:p.R371T,ENSG00000150636:ENST00000358653:exon7:c.G1112C:p.R371T	Score=567;Name=lod=269	NA	18q22.1	NA	NA	NA	NA	rs117721069	0.02	0.02	0.018	0.0191693	0.0139	0.0665	NA	0.0023	0.0123	0.02	0.07	NA	0.002	0.0134	0.07	1	T	0.0	B	0.0	B	0.060	N	1.000	N	-1.815	N	3.43	T	-0.965	T	0.000	T	0.078	1.439	10.75	1.62	0.029	1.359	2.225	1.43936	1.43936	1	0.007791	0.007717	NA	0.007	NA	9.2982424
722	19	49377424	49377424	G	A	exonic	PPP1R15A	NA	nonsynonymous SNV	PPP1R15A:NM_014330:exon2:c.G934A:p.G312S	exonic	ENSG00000087074	NA	nonsynonymous SNV	ENSG00000087074:ENST00000200453:exon2:c.G934A:p.G312S	NA	NA	19q13.33	NA	NA	NA	NA	rs11541192	0.14	0.14	0.146	0.152756	0.1849	0.0179	0.1023	0.2474	0.1667	0.18	0.02	0.11	0.21	0.1588	0.26	0.63	T	0.462	P	0.121	B	0.209	N	1.000	P	1.245	L	3.49	T	-0.964	T	0.000	T	0.022	2.784	15.27	4.26	2.078	0.442	12.568	2.783964	2.783964	0.26	0.191977	0.25783	NA	0.203	NA	9.2976564
722	3	97660106	97660106	A	C	exonic	CRYBG3	NA	nonsynonymous SNV	CRYBG3:NM_153605:exon20:c.A8620C:p.N2874H	exonic	ENSG00000080200	NA	nonsynonymous SNV	ENSG00000080200:ENST00000389622:exon5:c.A397C:p.N133H,ENSG00000080200:ENST00000182096:exon17:c.A2776C:p.N926H	NA	NA	3q11.2	NA	NA	NA	NA	rs4857302	0.51	0.51	0.501	0.48143	0.5139	0.6875	0.5101	0.2648	0.5082	0.52	0.73	0.46	0.29	0.5083	0.73	0.03	D	0.963	D	0.671	P	0.040	N	1.000	P	1.585	L	1.6	T	-1.002	T	0.000	T	0.148	1.502	10.97	3.35	0.077	0.703	5.992	1.501933	1.501933	0.02	0.513655	0.293287	NA	0.449	NA	9.2974784
723	1	14105139	14105139	T	A	exonic	PRDM2	NA	nonsynonymous SNV	PRDM2:NM_001007257:exon3:c.T246A:p.D82E,PRDM2:NM_012231:exon8:c.T849A:p.D283E,PRDM2:NM_015866:exon8:c.T849A:p.D283E	exonic	ENSG00000116731	NA	nonsynonymous SNV	ENSG00000116731:ENST00000413440:exon3:c.T246A:p.D82E,ENSG00000116731:ENST00000343137:exon4:c.T246A:p.D82E,ENSG00000116731:ENST00000235372:exon8:c.T849A:p.D283E,ENSG00000116731:ENST00000311066:exon8:c.T849A:p.D283E	Score=321;Name=lod=27	NA	1p36.21	NA	NA	NA	NA	rs2076324	0.35	0.35	0.288	0.371206	0.327	0.3988	0.5375	0.208	0.4908	0.32	0.42	0.51	0.2	0.3563	0.51	1	T	0.005	B	0.002	B	0.174	N	0.000	P	-1.23	N	4.98	T	-1.058	T	0.000	T	0.059	-2.514	0.003	-3.62	-1.465	-0.258	3.302	-2.513786	NA	1	0.356512	0.250567	NA	0.319	NA	9.2935214
723	1	20009790	20009790	C	T	exonic	TMCO4	NA	nonsynonymous SNV	TMCO4:NM_181719:exon16:c.G1648A:p.A550T	exonic	ENSG00000162542	NA	nonsynonymous SNV	ENSG00000162542:ENST00000375122:exon15:c.G1528A:p.A510T,ENSG00000162542:ENST00000375127:exon15:c.G1648A:p.A550T,ENSG00000162542:ENST00000294543:exon16:c.G1648A:p.A550T	NA	NA	1p36.13	NA	NA	NA	NA	rs41312012	0.0041	0.0041	0.002	0.00559105	0.0119	NA	0.0043	NA	0.0133	0.01	NA	0.0028	NA	0.0133	0.015	0.69	T	0.09	B	0.008	B	0.489	N	1.000	N	0.55	N	1.55	T	-0.989	T	0.019	T	0.058	1.888	12.27	-7.47	-0.937	-2.627	4.873	1.887704	1.887704	0.04	0.014651	0.001816	NA	0.007	NA	9.2934824
723	6	54186147	54186147	T	C	exonic	TINAG	NA	nonsynonymous SNV	TINAG:NM_014464:exon3:c.T472C:p.S158P	exonic	ENSG00000137251	NA	nonsynonymous SNV	ENSG00000137251:ENST00000259782:exon3:c.T472C:p.S158P,ENSG00000137251:ENST00000370864:exon3:c.T418C:p.S140P,ENSG00000137251:ENST00000370869:exon4:c.T460C:p.S154P	Score=358;Name=lod=38	NA	6p12.1	NA	NA	NA	NA	rs1058768	0.75	0.75	0.766	0.737819	0.6968	0.8472	0.6239	0.8238	0.6319	0.7	0.84	0.62	0.82	0.6839	0.84	1	T	0.0	B	0.0	B	0.000	N	0.000	P	-2.24	N	1.09	T	-0.981	T	0.007	T	0.157	0.069	4.375	5.53	1.357	1.391	10.639	0.069084	NA	1	0.659651	0.783477	NA	0.659	NA	9.2929824
723	11	44940828	44940828	G	A	exonic	TSPAN18	NA	nonsynonymous SNV	TSPAN18:NM_130783:exon6:c.G397A:p.V133I	exonic	ENSG00000157570	NA	nonsynonymous SNV	ENSG00000157570:ENST00000340160:exon6:c.G397A:p.V133I,ENSG00000157570:ENST00000533080:exon6:c.G202A:p.V68I,ENSG00000157570:ENST00000520358:exon7:c.G397A:p.V133I,ENSG00000157570:ENST00000533786:exon7:c.G397A:p.V133I,ENSG00000157570:ENST00000520999:exon8:c.G427A:p.V143I	Score=397;Name=lod=55	NA	11p11.2	NA	NA	NA	NA	rs2291334	0.34	0.34	0.299	0.347045	0.329	0.5575	0.415	0.034	0.5235	0.33	0.55	0.43	0.04	0.3701	0.55	0.2	T	0.363	B	0.181	B	0.013	N	0.000	P	1.175	L	-1.27	T	-0.931	T	0.000	T	0.102	1.671	11.55	2.4	0.622	5.142	9.262	1.671289	1.671289	0.17	0.341591	0.099864	NA	0.21	NA	9.2926424
723	1	21804620	21804620	C	T	exonic	NBPF3	NA	nonsynonymous SNV	NBPF3:NM_001256416:exon9:c.C1051T:p.P351S	exonic	ENSG00000142794	NA	nonsynonymous SNV	ENSG00000142794:ENST00000342104:exon9:c.C1051T:p.P351S	NA	NA	1p36.12	NA	NA	NA	NA	rs182761944	0.01	0.01	NA	0.00339457	0.0109	NA	0.0086	NA	NA	0.01	NA	0.01	NA	0.0129	0.019	0.81	T	0.003	B	0.001	B	.	.	1.000	N	.	.	4.29	T	-0.931	T	0.002	T	0.076	-1.941	0.007	-1.96	-3.014	-3.348	0.412	-1.940573	NA	NA	0.018837	0.00227	NA	0.007	NA	9.2906964
723	21	45959256	45959256	C	G	exonic	KRTAP10-1	NA	nonsynonymous SNV	KRTAP10-1:NM_198691:exon1:c.G778C:p.A260P	exonic	ENSG00000215455	NA	nonsynonymous SNV	ENSG00000215455:ENST00000400375:exon1:c.G778C:p.A260P	NA	NA	21q22.3	Score=955;Name=V$AP4_Q5	NA	NA	NA	rs143105755	0.01	0.01	0.007	0.00599042	0.0189	0.001	0.0029	0.0061	NA	0.02	NA	0.0028	0.002	0.0103	0.02	1	T	0.0	B	0.001	B	.	.	1.000	N	-1.995	N	5.83	T	-0.957	T	0.000	T	0.048	-0.802	0.672	-1.99	-0.658	1.652	5.017	-0.801637	NA	1	0.013611	0.004085	NA	NA	NA	9.2905224
723	20	31890175	31890175	G	T	exonic	BPIFB1	NA	nonsynonymous SNV	BPIFB1:NM_033197:exon10:c.G938T:p.S313I	exonic	ENSG00000125999	NA	nonsynonymous SNV	ENSG00000125999:ENST00000253354:exon10:c.G938T:p.S313I	NA	NA	20q11.21	NA	NA	NA	NA	rs6120222	0.1	0.1	0.113	0.118411	0.005	NA	0.0245	0.4319	NA	0.01	NA	0.03	0.41	0.0348	0.41	0.19	T	0.0	B	0.0	B	0.853	N	1.000	P	-0.895	N	3.19	T	-0.917	T	0.000	T	0.03	-0.584	1.38	3.27	0.296	1.275	4.887	-0.583585	NA	0.83	0.003023	0.354063	NA	0.101	NA	9.2905104
723	5	128301885	128301885	T	G	exonic	SLC27A6	NA	nonsynonymous SNV	SLC27A6:NM_001017372:exon1:c.T55G:p.L19V,SLC27A6:NM_014031:exon2:c.T55G:p.L19V	exonic	ENSG00000113396	NA	nonsynonymous SNV	ENSG00000113396:ENST00000262462:exon1:c.T55G:p.L19V,ENSG00000113396:ENST00000395266:exon2:c.T55G:p.L19V,ENSG00000113396:ENST00000506176:exon2:c.T55G:p.L19V	NA	NA	5q23.3	NA	NA	NA	NA	rs2526247	0.24	0.24	0.22	0.207069	0.3668	0.0585	0.2522	0.1853	0.1933	0.36	0.07	0.31	0.21	0.3	0.38	0.6	T	0.001	B	0.002	B	0.850	N	1.000	P	1.355	L	0.61	T	-1.026	T	0.000	T	0.035	-0.257	2.764	-8.9	-3.239	-6.036	2.438	-0.257268	NA	0.81	0.376047	0.220608	NA	0.123	NA	9.2904864
723	7	45932669	45932669	A	G	exonic	IGFBP1	NA	nonsynonymous SNV	IGFBP1:NM_000596:exon4:c.A759G:p.I253M	exonic	ENSG00000146678	NA	nonsynonymous SNV	ENSG00000146678:ENST00000468955:exon3:c.A630G:p.I210M,ENSG00000146678:ENST00000275525:exon4:c.A759G:p.I253M,ENSG00000146678:ENST00000457280:exon4:c.A753G:p.I251M	NA	NA	7p12.3	NA	Name=HEY1	NA	NA	rs4619	0.4	0.4	0.397	0.375998	0.334	0.5268	0.3588	0.444	0.184	0.34	0.49	0.28	0.49	0.3557	0.49	0.04	D	0.003	B	0.005	B	0.096	N	1.000	P	0.345	N	-0.01	T	-0.939	T	0.000	T	0.01	-0.621	1.24	1.51	0.045	1.012	6.171	-0.621478	NA	0.07	0.353605	0.453473	NA	0.355	NA	9.2900284
723	19	35175208	35175208	A	G	exonic	ZNF302	NA	nonsynonymous SNV	ZNF302:NM_001012320:exon5:c.A266G:p.Y89C,ZNF302:NM_018443:exon5:c.A266G:p.Y89C	exonic	ENSG00000089335	NA	nonsynonymous SNV	ENSG00000089335:ENST00000423823:exon5:c.A266G:p.Y89C,ENSG00000089335:ENST00000457781:exon5:c.A266G:p.Y89C,ENSG00000089335:ENST00000505163:exon5:c.A266G:p.Y89C,ENSG00000089335:ENST00000505242:exon5:c.A266G:p.Y89C,ENSG00000089335:ENST00000446502:exon6:c.A398G:p.Y133C	Score=272;Name=lod=17	NA	19q13.11	NA	NA	NA	NA	rs2290652	0.28	0.28	0.261	0.250599	0.3767	0.3006	0.2075	0.1369	0.2536	0.37	0.3	0.23	0.15	0.3116	0.37	0.12	T	1.0	D	0.998	D	.	.	0.000	P	.	.	6.05	T	-0.904	T	0.000	T	0.153	1.288	10.21	0.967	0.686	0.223	4.169	1.288432	1.288432	0.12	0.35586	0.172775	NA	0.225	NA	9.2891734
723	19	35175775	35175775	C	T	exonic	ZNF302	NA	nonsynonymous SNV	ZNF302:NM_001012320:exon5:c.C833T:p.T278I,ZNF302:NM_018443:exon5:c.C833T:p.T278I	exonic	ENSG00000089335	NA	nonsynonymous SNV	ENSG00000089335:ENST00000423823:exon5:c.C833T:p.T278I,ENSG00000089335:ENST00000457781:exon5:c.C833T:p.T278I,ENSG00000089335:ENST00000505242:exon5:c.C833T:p.T278I,ENSG00000089335:ENST00000446502:exon6:c.C965T:p.T322I	Score=403;Name=lod=58	NA	19q13.11	NA	NA	NA	NA	rs11543232	0.28	0.28	0.26	0.250599	0.3767	0.3006	0.2075	0.1369	0.2536	0.37	0.3	0.23	0.15	0.3089	0.37	1	T	0.998	D	0.993	D	.	.	0.000	P	0.22	N	2.66	T	-1.014	T	0.000	T	0.059	-0.517	1.64	0.967	0.822	0.177	3.223	-0.516644	NA	0.4	0.358953	0.185429	NA	0.225	NA	9.2887804
723	6	49701523	49701523	A	G	exonic	CRISP3	NA	nonsynonymous SNV	CRISP3:NM_001190986:exon5:c.T385C:p.S129P,CRISP3:NM_006061:exon5:c.T355C:p.S119P	exonic	ENSG00000096006	NA	nonsynonymous SNV	ENSG00000096006:ENST00000423399:exon3:c.T46C:p.S16P,ENSG00000096006:ENST00000393666:exon4:c.T316C:p.S106P,ENSG00000096006:ENST00000263045:exon5:c.T355C:p.S119P,ENSG00000096006:ENST00000354620:exon5:c.T385C:p.S129P,ENSG00000096006:ENST00000371159:exon5:c.T409C:p.S137P,ENSG00000096006:ENST00000433368:exon5:c.T385C:p.S129P	NA	NA	6p12.3	NA	NA	Name=5	NA	rs495335	0.68	0.68	0.644	0.67512	0.6948	0.5476	0.7594	0.7383	0.6411	0.69	0.54	0.75	0.76	0.68	0.76	1	T	0.0	B	0.0	B	0.004	N	1.000	P	-1.43	N	3.06	T	-0.980	T	0.010	T	0.321	-0.438	1.963	5.1	1.156	1.944	9.818	-0.438361	NA	1	0.672558	0.744439	NA	0.739	NA	9.2859754
724	19	37644489	37644489	A	T	exonic	ZNF585A	NA	nonsynonymous SNV	ZNF585A:NM_152655:exon6:c.T147A:p.H49Q,ZNF585A:NM_199126:exon6:c.T147A:p.H49Q	exonic	ENSG00000196967	NA	nonsynonymous SNV	ENSG00000196967:ENST00000356958:exon5:c.T312A:p.H104Q,ENSG00000196967:ENST00000292841:exon6:c.T147A:p.H49Q,ENSG00000196967:ENST00000355533:exon6:c.T147A:p.H49Q,ENSG00000196967:ENST00000392157:exon6:c.T147A:p.H49Q	NA	NA	19q13.12	NA	NA	NA	NA	rs62110074	0.01	0.01	0.007	0.00539137	0.0179	NA	0.0086	0.0008	0.002	0.03	0.0017	0.02	0.01	0.0115	0.03	0.01	D	0.091	B	0.11	B	0.243	U	1.000	N	0.625	N	3.41	T	-1.036	T	0.018	T	0.124	2.293	13.63	2.74	0.617	-0.029	5.410	2.293317	2.293317	0.32	0.019651	0.002952	NA	0.022	NA	9.2842824
724	19	8389405	8389405	G	A	exonic	KANK3	NA	synonymous SNV	KANK3:NM_198471:exon10:c.C2310T:p.A770A	exonic	ENSG00000186994	NA	synonymous SNV	ENSG00000186994:ENST00000330915:exon10:c.C2310T:p.A770A,ENSG00000186994:ENST00000593649:exon10:c.C2310T:p.A770A	Score=541;Name=lod=210	NA	19p13.2	Score=838;Name=V$HNF4_01	Name=CTCF_(C-20),JunD,CTCF_(SC-5916),Rad21,CTCF,Pol2	Name=37	NA	rs12981073	0.15	0.15	0.16	0.153554	0.1223	0.0655	0.1383	0.295	0.0961	0.12	0.07	0.15	0.28	0.1386	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.438534	NA	NA	0.122442	0.249887	NA	0.138	NA	9.2833246
724	19	21719719	21719719	T	A	exonic	ZNF429	NA	nonsynonymous SNV	ZNF429:NM_001001415:exon4:c.T864A:p.D288E	exonic	ENSG00000197013	NA	nonsynonymous SNV	ENSG00000197013:ENST00000358491:exon4:c.T864A:p.D288E	NA	NA	19p12	NA	Name=SETDB1,ZNF274,KAP1	NA	NA	rs143458227	0.01	0.01	0.005	0.0135783	0.0179	NA	0.0231	NA	0.0348	0.02	NA	0.02	NA	0.0181	0.02	0.95	T	0.109	B	0.015	B	.	.	1.000	N	-0.685	N	3.21	T	-0.936	T	0.003	T	0.036	-1.043	0.203	-1.6	0.251	-3.401	2.347	-1.042878	NA	1	0.014142	0.002563	NA	0.007	NA	9.2831914
724	19	49964977	49964977	C	G	exonic	ALDH16A1	NA	nonsynonymous SNV	ALDH16A1:NM_001145396:exon6:c.C679G:p.L227V,ALDH16A1:NM_153329:exon6:c.C679G:p.L227V	exonic	ENSG00000161618	NA	nonsynonymous SNV	ENSG00000161618:ENST00000540132:exon3:c.C190G:p.L64V,ENSG00000161618:ENST00000433981:exon4:c.C184G:p.L62V,ENSG00000161618:ENST00000293350:exon6:c.C679G:p.L227V,ENSG00000161618:ENST00000455361:exon6:c.C679G:p.L227V	NA	NA	19q13.33	NA	Name=SETDB1	NA	NA	rs1320303	0.52	0.52	0.551	0.510184	0.7107	0.3214	0.4222	0.5257	0.5399	0.69	0.3	0.49	0.55	0.6222	0.72	1	T	0.001	B	0.003	B	0.762	N	1.000	P	-1.175	N	1.93	T	-0.978	T	0.000	T	0.052	-3.957	0.001	-9.23	-2.738	-3.278	13.206	-3.95699	NA	1	0.71731	0.521848	NA	0.442	NA	9.2831234
724	3	12475557	12475557	C	T	exonic	PPARG	NA	synonymous SNV	PPARG:NM_005037:exon7:c.C1347T:p.H449H,PPARG:NM_015869:exon7:c.C1431T:p.H477H,PPARG:NM_138711:exon8:c.C1347T:p.H449H,PPARG:NM_138712:exon8:c.C1347T:p.H449H	exonic	ENSG00000132170	NA	synonymous SNV	ENSG00000132170:ENST00000287820:exon7:c.C1431T:p.H477H,ENSG00000132170:ENST00000397015:exon7:c.C1347T:p.H449H,ENSG00000132170:ENST00000309576:exon8:c.C1347T:p.H449H,ENSG00000132170:ENST00000397010:exon8:c.C1347T:p.H449H,ENSG00000132170:ENST00000397012:exon8:c.C1347T:p.H449H,ENSG00000132170:ENST00000397026:exon9:c.C1365T:p.H455H	Score=466;Name=lod=104	NA	3p25.2	Score=943;Name=V$USF_C	Name=STAT3,Pol2	NA	NA	rs3856806	0.12	0.12	0.103	0.126597	0.1213	0.2113	0.1138	0.0484	0.1595	0.13	0.2	0.08	0.04	0.134	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.879475	NA	NA	0.128488	0.064004	NA	0.138	CLINSIG=non-pathogenic|probable-non-pathogenic;CLNDBN=Glioma_susceptibility_1|not_specified;CLNREVSTAT=single|single;CLNACC=RCV000008615.2|RCV000118043.2;CLNDSDB=MedGen:OMIM:Orphanet:Orphanet|.;CLNDSDBID=C2750850:137800:ORPHA360:ORPHA94|.	9.2828786
724	2	228194481	228194481	G	T	exonic	MFF	NA	nonsynonymous SNV	MFF:NM_001277061:exon3:c.G20T:p.S7I,MFF:NM_020194:exon3:c.G20T:p.S7I	exonic	ENSG00000168958	NA	nonsynonymous SNV	ENSG00000168958:ENST00000353339:exon3:c.G20T:p.S7I,ENSG00000168958:ENST00000392059:exon3:c.G20T:p.S7I,ENSG00000168958:ENST00000436237:exon3:c.G20T:p.S7I,ENSG00000168958:ENST00000443428:exon3:c.G20T:p.S7I	Score=534;Name=lod=198	NA	2q36.3	NA	NA	NA	NA	rs3211098	0.2	0.2	0.199	0.272364	0.3748	0.245	0.2493	0.0961	0.4499	0.27	0.19	0.24	0.07	0.3292	0.35	.	.	0.079	B	0.035	B	0.013	N	0.000	P	0.69	N	1.35	T	-0.965	T	0.000	T	0.264	1.793	11.95	3.1	0.365	2.061	7.081	1.792561	1.792561	0	0.347093	0.117113	NA	NA	NA	9.2822404
724	2	17947886	17947886	G	A	exonic	GEN1	NA	nonsynonymous SNV	GEN1:NM_001130009:exon5:c.G566A:p.S189N,GEN1:NM_182625:exon5:c.G566A:p.S189N	exonic	ENSG00000178295	NA	nonsynonymous SNV	ENSG00000178295:ENST00000317402:exon5:c.G566A:p.S189N,ENSG00000178295:ENST00000381254:exon5:c.G566A:p.S189N	NA	NA	2p24.2	Score=810;Name=V$PBX1_02	NA	NA	NA	rs116772931	0.01	0.01	0.006	0.00938498	0.0199	NA	0.0202	0.0008	0.0123	0.02	NA	0.01	NA	0.0125	0.022	0.19	T	0.002	B	0.009	B	0.489	N	1.000	N	0.345	N	-0.49	T	-1.053	T	0.072	T	0.027	0.973	8.972	-2.36	-0.400	0.268	3.703	0.973193	NA	0.05	0.018837	0.003858	NA	0.014	NA	9.2820964
724	19	52887603	52887603	G	A	exonic	ZNF880	NA	nonsynonymous SNV	ZNF880:NM_001145434:exon4:c.G770A:p.R257Q	exonic	ENSG00000221923	NA	nonsynonymous SNV	ENSG00000221923:ENST00000422689:exon4:c.G770A:p.R257Q	NA	NA	19q13.41	NA	NA	NA	NA	rs78052167	0.02	0.02	NA	0.0211661	0.0298	0.0536	0.0288	0.0008	0.001	0.03	NA	0.04	0.0041	0.0221	0.04	.	.	0.294	B	0.064	B	.	.	1.000	N	0.285	N	1.75	T	-1.011	T	0.006	T	0.074	-0.7	0.973	-3.79	-0.882	-7.860	3.169	-0.699584	NA	0.56	NA	NA	NA	0.007	NA	9.2814334
724	4	8621172	8621172	G	A	exonic	CPZ	NA	nonsynonymous SNV	CPZ:NM_003652:exon10:c.G1754A:p.R585Q,CPZ:NM_001014447:exon11:c.G1787A:p.R596Q,CPZ:NM_001014448:exon11:c.G1376A:p.R459Q	exonic	ENSG00000109625	NA	nonsynonymous SNV	ENSG00000109625:ENST00000429646:exon9:c.G611A:p.R204Q,ENSG00000109625:ENST00000315782:exon10:c.G1754A:p.R585Q,ENSG00000109625:ENST00000360986:exon11:c.G1787A:p.R596Q,ENSG00000109625:ENST00000382480:exon11:c.G1376A:p.R459Q	NA	NA	4p16.1	NA	NA	NA	NA	rs61734020	0.02	0.02	0.016	0.0215655	0.0179	0.0238	0.0086	0.0424	0.0041	0.02	0.02	0.01	0.03	0.0175	0.046	0.59	T	0.033	B	0.003	B	0.000	N	1.000	N	1.7	L	2.12	T	-1.076	T	0.021	T	0.077	1.928	12.4	-5.92	-1.323	-0.088	2.465	1.928003	1.928003	0.07	0.017791	0.046074	NA	0.014	NA	9.2801424
724	2	203155936	203155936	A	C	exonic	NOP58	NA	synonymous SNV	NOP58:NM_015934:exon8:c.A723C:p.S241S	exonic	ENSG00000055044	NA	synonymous SNV	ENSG00000055044:ENST00000433543:exon4:c.A333C:p.S111S,ENSG00000055044:ENST00000264279:exon8:c.A723C:p.S241S	Score=626;Name=lod=467	NA	2q33.1	Score=858;Name=V$CDPCR3_01	Name=PU.1	Name=32	NA	rs3731700	0.1	0.1	0.071	0.124401	0.1402	0.123	0.1427	0.0053	0.2577	0.14	0.1	0.15	0.01	0.1264	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.356063	1.356063	NA	0.121628	0.024739	NA	0.065	NA	9.2784386
724	9	99537071	99537071	T	C	exonic	ZNF510	NA	nonsynonymous SNV	ZNF510:NM_014930:exon3:c.A128G:p.Q43R	exonic	ENSG00000081386	NA	nonsynonymous SNV	ENSG00000081386:ENST00000223428:exon3:c.A128G:p.Q43R,ENSG00000081386:ENST00000374641:exon3:c.A128G:p.Q43R,ENSG00000081386:ENST00000375231:exon3:c.A128G:p.Q43R	Score=349;Name=lod=35	NA	9q22.33	NA	NA	NA	NA	rs2289651	0.08	0.08	0.084	0.0617013	0.0129	0.2063	0.0202	0.0265	0.0399	0.01	0.25	0.02	0.02	0.0322	0.25	0.07	T	0.267	B	0.039	B	.	.	0.000	P	0	N	5.46	T	-0.935	T	0.000	T	0.114	2.209	13.34	1.52	0.438	1.940	5.073	2.209217	2.209217	0.01	0.010465	0.022242	ID=COSM150637;OCCURENCE=1(stomach)	0.058	NA	9.2777684
724	16	28883241	28883241	A	G	exonic	SH2B1	NA	nonsynonymous SNV	SH2B1:NM_015503:exon5:c.A1450G:p.T484A,SH2B1:NM_001145795:exon6:c.A1450G:p.T484A,SH2B1:NM_001145796:exon6:c.A1450G:p.T484A,SH2B1:NM_001145797:exon6:c.A1450G:p.T484A,SH2B1:NM_001145812:exon6:c.A1450G:p.T484A	exonic	ENSG00000178188	NA	nonsynonymous SNV	ENSG00000178188:ENST00000337120:exon5:c.A1450G:p.T484A,ENSG00000178188:ENST00000538342:exon5:c.A442G:p.T148A,ENSG00000178188:ENST00000545570:exon5:c.A520G:p.T174A,ENSG00000178188:ENST00000566176:exon5:c.A511G:p.T171A,ENSG00000178188:ENST00000359285:exon6:c.A1450G:p.T484A,ENSG00000178188:ENST00000395532:exon6:c.A1450G:p.T484A,ENSG00000178188:ENST00000322610:exon8:c.A1450G:p.T484A	Score=585;Name=lod=318	Name=Body mass index,Weight,Obesity	16p11.2	NA	NA	NA	NA	rs7498665	0.27	0.27	0.23	0.261382	0.329	0.126	0.4856	0.2277	0.2178	0.34	0.13	0.4	0.21	0.3453	0.4	0.89	T	0.0	B	0.0	B	0.587	N	1.000	P	0	N	1.66	T	-0.931	T	0.000	T	0.024	0.017	4.1	3.08	0.567	0.782	4.220	0.016531	NA	0.31	0.381395	0.270369	ID=COSM148065;OCCURENCE=1(stomach)	0.145	NA	9.2776384
724	6	30893428	30893428	G	A	exonic	VARS2	NA	nonsynonymous SNV	VARS2:NM_001167733:exon27:c.G2473A:p.A825T,VARS2:NM_001167734:exon28:c.G2983A:p.A995T,VARS2:NM_020442:exon28:c.G2893A:p.A965T	exonic	ENSG00000137411	NA	nonsynonymous SNV	ENSG00000137411:ENST00000321897:exon27:c.G2893A:p.A965T,ENSG00000137411:ENST00000542001:exon27:c.G2473A:p.A825T,ENSG00000137411:ENST00000416670:exon28:c.G2893A:p.A965T,ENSG00000137411:ENST00000541562:exon28:c.G2983A:p.A995T	NA	NA	6p21.33	Score=877;Name=V$AREB6_03	NA	NA	NA	rs2252863	0.24	0.24	0.24	0.223043	0.3559	0.247	0.2075	0.0983	0.2413	0.35	0.28	0.2	0.06	0.3295	0.37	0.51	T	0.098	B	0.011	B	0.539	N	1.000	P	1.845	L	1.44	T	-1.016	T	0.023	T	0.071	0.008	4.057	-2.55	-0.547	-1.432	6.792	0.008232	NA	0.35	0.370693	0.143	NA	0.268	NA	9.2772404
724	3	184429414	184429414	C	A	exonic	MAGEF1	NA	nonsynonymous SNV	MAGEF1:NM_022149:exon1:c.G196T:p.A66S	exonic	ENSG00000177383	NA	nonsynonymous SNV	ENSG00000177383:ENST00000317897:exon1:c.G196T:p.A66S	NA	NA	3q27.1	NA	Name=ELF1_(SC-631),CTCF,E2F6_(H-50),YY1_(C-20),HA-E2F1,E2F6,ZNF263,Pol2	Name=147	NA	rs10937187	0.52	0.52	0.498	0.493011	0.7356	0.4355	0.4741	0.3094	0.5644	0.75	0.4	0.52	0.31	0.6072	0.75	0.3	T	0.063	B	0.026	B	0.254	N	1.000	P	0.55	N	3.73	T	-1.014	T	0.000	T	0.069	0.797	8.197	2.1	0.581	1.444	5.094	0.797357	NA	0.86	0.713654	0.348842	NA	0.551	NA	9.2768794
724	1	120054215	120054215	A	G	exonic	HSD3B1	NA	nonsynonymous SNV	HSD3B1:NM_000862:exon3:c.A235G:p.I79V	exonic	ENSG00000203857	NA	nonsynonymous SNV	ENSG00000203857:ENST00000528909:exon2:c.A235G:p.I79V,ENSG00000203857:ENST00000235547:exon3:c.A241G:p.I81V,ENSG00000203857:ENST00000369413:exon3:c.A235G:p.I79V,ENSG00000203857:ENST00000531340:exon3:c.A235G:p.I79V	Score=387;Name=lod=50	NA	1p12	NA	NA	NA	NA	rs6201	0.09	0.09	0.081	0.136581	0.005	0.0546	0.0706	0.385	0.0675	0.0013	0.03	0.06	0.33	0.0482	0.33	1	T	0.0	B	0.001	B	0.000	N	1.000	P	-1.72	N	-1.46	T	-0.998	T	0.045	T	0.201	-2.694	0	0.153	0.119	2.367	7.304	-2.693868	NA	1	0.003372	0.315706	NA	0.109	NA	9.2767614
724	19	12089709	12089709	T	C	exonic	ZNF763	NA	nonsynonymous SNV	ZNF763:NM_001012753:exon4:c.T979C:p.Y327H	exonic	ENSG00000197054,ENSG00000267179	NA	nonsynonymous SNV	ENSG00000197054:ENST00000545530:exon2:c.T604C:p.Y202H,ENSG00000197054:ENST00000343949:exon4:c.T979C:p.Y327H,ENSG00000197054:ENST00000358987:exon4:c.T970C:p.Y324H,ENSG00000197054:ENST00000538752:exon4:c.T1030C:p.Y344H,ENSG00000267179:ENST00000590798:exon4:c.T1030C:p.Y344H	NA	NA	19p13.2	NA	NA	NA	NA	rs7254529	0.02	0.02	0.016	0.019369	0.0229	0.006	0.0144	0.0257	0.0245	0.02	0.01	0.02	0.03	0.0167	0.03	0.54	T	0.0	B	0.0	B	.	.	1.000	N	-0.085	N	2.47	T	-0.976	T	0.006	T	0.01	-1.931	0.008	-1.55	-2.052	-1.474	4.559	-1.931359	NA	0.53	0.018264	0.027841	NA	0.014	NA	9.2754694
724	9	136199503	136199503	G	A	exonic	SURF6	NA	nonsynonymous SNV	SURF6:NM_006753:exon4:c.C487T:p.R163W	exonic	ENSG00000148296	NA	nonsynonymous SNV	ENSG00000148296:ENST00000372022:exon4:c.C487T:p.R163W	NA	NA	9q34.2	NA	NA	NA	NA	rs886090	0.27	0.27	0.224	0.282947	0.3569	0.3075	0.3501	0.0386	0.4642	0.37	0.28	0.34	0.06	0.3503	0.37	0.02	D	0.999	D	0.91	D	0.297	N	0.999	P	1.78	L	2.4	T	-0.946	T	0.000	T	0.065	1.233	10.01	1.02	0.029	0.524	6.647	1.233467	1.233467	0.02	0.35093	0.08443	NA	0.21	NA	9.2752034
724	11	82643760	82643760	G	T	exonic	C11orf82	NA	nonsynonymous SNV	C11orf82:NM_145018:exon6:c.G1380T:p.R460S	exonic	ENSG00000165490	NA	nonsynonymous SNV	ENSG00000165490:ENST00000329143:exon2:c.G477T:p.R159S,ENSG00000165490:ENST00000533655:exon6:c.G1380T:p.R460S,ENSG00000165490:ENST00000430323:exon7:c.G1380T:p.R460S	NA	NA	11q14.1	NA	Name=TAL1_(SC-12984),GATA2_(CG2-96)	Name=3	NA	rs7947780	0.3	0.3	0.296	0.307508	0.3579	0.3244	0.4049	0.1793	0.3425	0.36	0.3	0.35	0.19	0.3483	0.36	.	.	0.048	B	0.014	B	0.226	N	1.000	P	1.59	L	1.12	T	-0.967	T	0.000	T	0.278	-0.014	3.944	2.37	0.534	0.093	5.656	-0.013559	NA	0.01	0.352093	0.223332	NA	0.21	NA	9.2750404
725	3	66430811	66430811	T	G	exonic	LRIG1	NA	nonsynonymous SNV	LRIG1:NM_015541:exon19:c.A3158C:p.Q1053P	exonic	ENSG00000144749	NA	nonsynonymous SNV	ENSG00000144749:ENST00000273261:exon19:c.A3158C:p.Q1053P,ENSG00000144749:ENST00000383703:exon20:c.A3089C:p.Q1030P	NA	NA	3p14.1	NA	NA	NA	NA	rs2279290	0.12	0.12	0.102	0.108027	0.1958	0.0556	0.1138	0.084	0.1002	0.2	0.05	0.13	0.09	0.1621	0.2	0.08	T	0.467	P	0.134	B	0.002	N	0.999	P	1.61	L	-0.21	T	-1.084	T	0.000	T	0.499	1.253	10.08	3.13	0.931	2.859	9.968	1.25274	1.25274	0.01	0.200698	0.096686	NA	0.174	NA	9.2747354
725	4	10099340	10099340	T	C	exonic	WDR1	NA	nonsynonymous SNV	WDR1:NM_017491:exon5:c.A553G:p.I185V	exonic	ENSG00000071127	NA	nonsynonymous SNV	ENSG00000071127:ENST00000508079:exon4:c.A565G:p.I189V,ENSG00000071127:ENST00000382452:exon5:c.A553G:p.I185V,ENSG00000071127:ENST00000499869:exon5:c.A553G:p.I185V	NA	NA	4p16.1	Score=884;Name=V$SRY_02	Name=Pol2-4H8	NA	NA	rs13441	0.62	0.62	0.598	0.57528	0.7097	0.6538	0.7147	0.3941	0.502	0.7	0.62	0.73	0.4	0.6492	0.73	0.2	T	0.019	B	0.026	B	0.006	N	0.999	P	0.615	N	0.2	T	-0.978	T	0.000	T	0.107	1.004	9.102	4.35	0.917	1.162	10.392	1.004302	NA	0.64	0.70029	0.461089	NA	0.601	NA	9.2741434
725	1	76397972	76397972	C	T	exonic	ASB17	NA	nonsynonymous SNV	ASB17:NM_080868:exon1:c.G5A:p.S2N	exonic	ENSG00000154007	NA	nonsynonymous SNV	ENSG00000154007:ENST00000284142:exon1:c.G5A:p.S2N	Score=412;Name=lod=63	NA	1p31.1	NA	NA	NA	NA	rs3795251	0.38	0.38	0.355	0.396565	0.3221	0.7073	0.2983	0.1884	0.5041	0.33	0.64	0.32	0.19	0.3856	0.64	0.22	T	0.002	B	0.002	B	0.003	N	0.990	P	0.205	N	1.3	T	-1.034	T	0.019	T	0.046	0.685	7.663	3.13	0.434	1.304	8.176	0.685413	NA	0.79	0.351886	0.19877	NA	0.449	NA	9.2737474
725	12	71094955	71094955	C	T	exonic	PTPRR	NA	nonsynonymous SNV	PTPRR:NM_130846:exon3:c.G421A:p.V141I,PTPRR:NM_001207016:exon4:c.G538A:p.V180I,PTPRR:NM_001207015:exon6:c.G820A:p.V274I,PTPRR:NM_002849:exon7:c.G1156A:p.V386I	exonic	ENSG00000153233	NA	nonsynonymous SNV	ENSG00000153233:ENST00000440835:exon3:c.G421A:p.V141I,ENSG00000153233:ENST00000378778:exon4:c.G538A:p.V180I,ENSG00000153233:ENST00000549308:exon4:c.G421A:p.V141I,ENSG00000153233:ENST00000550661:exon4:c.G421A:p.V141I,ENSG00000153233:ENST00000342084:exon6:c.G820A:p.V274I,ENSG00000153233:ENST00000283228:exon7:c.G1156A:p.V386I	Score=622;Name=lod=450	NA	12q15	Score=821;Name=V$HEN1_01	NA	NA	NA	rs35387004	0.06	0.06	0.058	0.0708866	0.0139	0.006	0.072	0.2035	0.0164	0.01	0.0017	0.06	0.2	0.0307	0.2	0.2	T	0.001	B	0.001	B	0.264	N	0.989	P	0.46	N	1.59	T	-1.011	T	0.000	T	0.118	1.407	10.64	1.04	0.376	0.070	8.502	1.40672	1.40672	0.28	0.015116	0.150023	NA	0.08	NA	9.2736174
725	10	26357748	26357748	G	A	exonic	MYO3A	NA	nonsynonymous SNV	MYO3A:NM_017433:exon12:c.G1105A:p.V369I	exonic	ENSG00000095777	NA	nonsynonymous SNV	ENSG00000095777:ENST00000543632:exon11:c.G1105A:p.V369I,ENSG00000095777:ENST00000265944:exon12:c.G1105A:p.V369I	Score=580;Name=lod=304	NA	10p12.1	NA	NA	NA	NA	rs3817420	0.62	0.62	0.628	0.66893	0.7227	0.6181	0.6369	0.7133	0.6288	0.63	0.59	0.6	0.65	0.6794	0.68	0.21	T	0.001	B	0.001	B	0.000	N	0.000	P	-0.345	N	-0.59	T	-0.903	T	0.000	T	0.051	1.999	12.64	3.19	0.068	4.224	6.144	1.999339	1.999339	0.36	0.65907	0.681798	NA	0.239	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000039024.1;CLNDSDB=.;CLNDSDBID=.	9.2721634
725	4	39448529	39448529	G	A	exonic	KLB	NA	nonsynonymous SNV	KLB:NM_175737:exon4:c.G2183A:p.R728Q	exonic	ENSG00000134962	NA	nonsynonymous SNV	ENSG00000134962:ENST00000257408:exon4:c.G2183A:p.R728Q	NA	NA	4p14	NA	Name=c-Myc,CTCF,Pol2-4H8,HA-E2F1,Pol2	Name=117	NA	rs17618244	0.16	0.16	0.137	0.153754	0.1909	0.1885	0.2219	0.0514	0.1697	0.17	0.18	0.22	0.06	0.1796	0.22	0.37	T	0.66	P	0.127	B	0.029	N	1.000	P	0.91	L	1.59	T	-0.957	T	0.000	T	0.049	1.168	9.751	0.475	-0.262	0.400	5.966	1.16751	NA	0.33	0.191457	0.068213	NA	0.123	NA	9.2713764
725	12	6442346	6442346	A	G	intronic	TNFRSF1A	NA	NA	NA	exonic	ENSG00000067182	NA	nonsynonymous SNV	ENSG00000067182:ENST00000440083:exon4:c.T659C:p.F220S	NA	NA	12p13.31	Score=830;Name=V$AHRARNT_01	NA	Name=5	NA	rs1800692	0.69	0.69	0.704	0.71266	0.6322	0.4653	0.7104	0.9705	0.7035	0.63	0.52	0.71	0.97	0.6665	0.97	0	D	.	.	.	.	.	.	1.000	P	.	.	-5.31	D	-0.960	T	0.000	T	0.24	0.977	8.987	2.0	0.149	-0.512	7.375	0.976673	NA	NA	0.597674	0.900817	ID=COSN164119;OCCURENCE=1(breast)	0.79	NA	9.2702927
725	19	40408532	40408532	G	A	exonic	FCGBP	NA	nonsynonymous SNV	FCGBP:NM_003890:exon8:c.C4307T:p.P1436L	exonic	ENSG00000090920	NA	nonsynonymous SNV	ENSG00000090920:ENST00000221347:exon8:c.C4307T:p.P1436L	NA	NA	19q13.2	NA	NA	NA	NA	rs36106401	0.11	0.11	0.086	0.11222	0.1839	0.0387	0.2003	0.0363	0.1544	0.19	0.03	0.14	0.04	0.1768	0.2	0.63	T	0.61	P	0.055	B	.	.	1.000	P	1.225	L	2.14	T	-0.997	T	0.000	T	0.177	2.242	13.46	4.8	2.240	.	11.069	2.242442	2.242442	NA	0.203488	0.080799	ID=COSM148630;OCCURENCE=1(stomach)	0.174	NA	9.2691454
725	17	67125840	67125840	C	T	exonic	ABCA6	NA	nonsynonymous SNV	ABCA6:NM_080284:exon7:c.G844A:p.V282I	exonic	ENSG00000154262	NA	nonsynonymous SNV	ENSG00000154262:ENST00000284425:exon7:c.G844A:p.V282I	NA	NA	17q24.3	NA	NA	NA	NA	rs4968839	0.54	0.54	0.511	0.555112	0.7107	0.4673	0.7219	0.3313	0.6697	0.7	0.42	0.68	0.34	0.6563	0.7	0.33	T	0.0	B	0.002	B	0.070	N	0.996	P	-1.87	N	-1.67	D	-0.903	T	0.000	T	0.046	-0.26	2.753	2.06	1.048	1.046	1.991	-0.259664	NA	0.35	0.697509	0.406945	NA	0.529	NA	9.2688244
725	2	202122995	202122995	A	G	exonic	CASP8	NA	nonsynonymous SNV	CASP8:NM_001080125:exon1:c.A41G:p.K14R	exonic	ENSG00000064012	NA	nonsynonymous SNV	ENSG00000064012:ENST00000358485:exon1:c.A41G:p.K14R,ENSG00000064012:ENST00000437283:exon1:c.A41G:p.K14R	NA	NA	2q33.1	NA	Name=Oct-2,c-Myc,Max,NFKB,ELF1_(SC-631),GTF2F1_(RAP-74),USF-1,POU2F2,E2F6_(H-50),Pol2(b),Sin3Ak-20,E2F6,IRF4_(M-17),USF1_(SC-8983),Pol2-4H8,ZNF263,Mxi1_(bHLH),Pol2,MEF2C_(SC-13268),STAT3	Name=144	NA	rs3769823	0.65	0.65	0.644	0.646366	0.6918	0.6964	0.5922	0.5862	0.6677	0.68	0.68	0.6	0.61	0.6673	0.71	0.97	T	0.008	B	0.015	B	0.000	U	1.000	P	.	.	4.26	T	-0.995	T	0.000	T	0.07	1.628	11.4	2.78	0.875	1.746	6.134	1.627895	1.627895	0.76	0.705882	0.591615	NA	0.58	NA	9.2683514
725	9	138440624	138440624	G	C	exonic	OBP2A	NA	synonymous SNV	OBP2A:NM_014582:exon5:c.G459C:p.S153S	exonic	ENSG00000122136	NA	nonsynonymous SNV	ENSG00000122136:ENST00000340780:exon5:c.G524C:p.R175P	NA	NA	9q34.3	NA	NA	NA	NA	rs3827835	0.17	0.17	0.156	0.155751	0.2515	0.1567	0.1383	0.062	0.1953	0.25	0.15	0.17	0.07	0.2158	0.26	0.39	T	0.0	B	0.0	B	.	.	1.000	P	.	.	1.43	T	-0.977	T	0.000	T	.	-0.621	1.241	-4.97	-2.382	-3.579	6.252	-0.621429	NA	0.26	0.264767	0.094644	NA	0.087	NA	9.267933
726	3	136574501	136574501	A	G	exonic	SLC35G2	NA	nonsynonymous SNV	SLC35G2:NM_001097599:exon2:c.A1199G:p.K400R,SLC35G2:NM_001097600:exon2:c.A1199G:p.K400R,SLC35G2:NM_025246:exon2:c.A1199G:p.K400R	exonic	ENSG00000168917	NA	nonsynonymous SNV	ENSG00000168917:ENST00000393079:exon2:c.A1199G:p.K400R,ENSG00000168917:ENST00000446465:exon2:c.A1199G:p.K400R	Score=737;Name=lod=1316	NA	3q22.3	NA	NA	NA	NA	rs1052618	0.72	0.72	0.688	0.712859	0.6561	0.8502	0.7695	0.5983	0.7444	0.65	0.86	0.75	0.63	0.715	0.86	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-0.895	N	2.15	T	-0.980	T	0.000	T	0.033	0.038	4.211	5.79	1.480	5.396	13.854	0.037933	NA	1	0.697558	0.627099	NA	0.565	NA	9.2646754
726	9	35906565	35906565	G	A	exonic	HRCT1	NA	nonsynonymous SNV	HRCT1:NM_001039792:exon1:c.G281A:p.R94H	exonic	ENSG00000196196	NA	nonsynonymous SNV	ENSG00000196196:ENST00000354323:exon1:c.G281A:p.R94H	NA	NA	9p13.3	NA	NA	NA	NA	rs7852213	0.1	0.1	0.102	NA	NA	NA	NA	NA	NA	0.13	0.02	0.08	0.16	0.031	0.16	0	D	0.0	B	0.0	B	.	.	1.000	P	0	N	.	.	-1.043	T	0.000	T	0.079	0.599	7.227	-0.589	-0.036	-2.722	3.463	0.59861	NA	NA	0.039663	0.120791	NA	0.007	NA	9.2626704
726	19	49377319	49377319	A	G	exonic	PPP1R15A	NA	nonsynonymous SNV	PPP1R15A:NM_014330:exon2:c.A829G:p.K277E	exonic	ENSG00000087074	NA	nonsynonymous SNV	ENSG00000087074:ENST00000200453:exon2:c.A829G:p.K277E	NA	NA	19q13.33	NA	Name=Pol2	NA	NA	rs610308	0.39	0.39	0.418	0.444888	0.3539	0.1141	0.3444	0.8033	0.4663	0.35	0.12	0.35	0.78	0.3678	0.78	1	T	0.0	B	0.0	B	0.008	N	1.000	P	-0.345	N	3.45	T	-0.986	T	0.000	T	0.015	-0.808	0.655	-3.11	-0.994	-0.530	5.550	-0.808008	NA	1	0.34907	0.747844	NA	0.471	NA	9.2625634
726	11	5602275	5602275	A	G	exonic	OR52B6	NA	nonsynonymous SNV	OR52B6:NM_001005162:exon1:c.A169G:p.T57A	exonic	ENSG00000187747	NA	nonsynonymous SNV	ENSG00000187747:ENST00000345043:exon1:c.A169G:p.T57A	NA	NA	11p15.4	NA	Name=TAL1_(SC-12984)	NA	NA	rs1077126	0.55	0.55	0.542	0.572284	0.331	0.7669	0.5692	0.6362	0.5358	0.34	0.76	0.53	0.63	0.4287	0.76	0.3	T	0.0	B	0.002	B	0.001	N	1.000	P	0.415	N	7.45	T	-1.098	T	0.000	T	0.018	-1.03	0.219	3.24	0.774	-0.981	9.284	-1.029841	NA	0.51	0.311915	0.560465	NA	0.384	NA	9.2617184
726	11	123909671	123909671	G	A	exonic	OR10G7	NA	nonsynonymous SNV	OR10G7:NM_001004463:exon1:c.C38T:p.T13M	exonic	ENSG00000182634	NA	nonsynonymous SNV	ENSG00000182634:ENST00000330487:exon1:c.C38T:p.T13M	NA	NA	11q24.2	NA	NA	NA	NA	rs11827843	0.06	0.06	0.057	0.0784744	0.0139	0.0744	0.0288	0.1558	0.0798	0.02	0.09	0.03	0.13	0.0408	0.14	0.2	T	0.003	B	0.003	B	0.791	N	1.000	P	0.27	N	7.46	T	-1.066	T	0.000	T	0.035	0.233	5.259	-2.34	-0.569	-1.233	3.522	0.233252	NA	0.32	0.018144	0.143636	NA	0.08	NA	9.2604894
726	2	71351487	71351487	G	A	exonic	MCEE	NA	nonsynonymous SNV	MCEE:NM_032601:exon2:c.C227T:p.A76V	exonic	ENSG00000124370	NA	nonsynonymous SNV	ENSG00000124370:ENST00000244217:exon2:c.C227T:p.A76V	NA	NA	2p13.3	Score=782;Name=V$HEN1_01	NA	NA	NA	rs11541017	0.21	0.21	0.184	0.182508	0.3956	0.0446	0.2695	0.0318	0.2474	0.4	0.05	0.3	0.03	0.3056	0.4	0.47	T	0.015	B	0.003	B	0.690	N	1.000	P	0.325	N	0.01	T	-0.972	T	0.000	T	0.027	1.228	9.982	-4.05	-1.116	-0.150	7.096	1.228432	NA	0.13	0.372326	0.081026	ID=COSM1409252;OCCURENCE=1(large_intestine)	0.232	NA	9.2598074
726	2	111598958	111598958	C	T	exonic	ACOXL	NA	nonsynonymous SNV	ACOXL:NM_001142807:exon10:c.C764T:p.T255M	exonic	ENSG00000153093	NA	nonsynonymous SNV	ENSG00000153093:ENST00000417074:exon4:c.C278T:p.T93M,ENSG00000153093:ENST00000340561:exon10:c.C764T:p.T255M,ENSG00000153093:ENST00000389811:exon10:c.C764T:p.T255M,ENSG00000153093:ENST00000439055:exon10:c.C764T:p.T255M	Score=448;Name=lod=88	NA	2q13	NA	NA	NA	NA	rs1554005	0.19	0.19	0.166	0.182907	0.1809	0.1567	0.2349	0.1467	0.2239	0.18	0.15	0.25	0.19	0.2072	0.25	0.08	T	0.672	P	0.298	B	0.028	N	0.988	P	1.785	L	-0.63	T	-1.199	T	0.001	T	0.208	0.953	8.885	3.38	0.685	0.153	7.550	0.95266	NA	0.18	0.188227	0.160082	NA	0.254	NA	9.2570064
726	18	56204671	56204671	A	T	exonic	ALPK2	NA	nonsynonymous SNV	ALPK2:NM_052947:exon5:c.T2748A:p.N916K	exonic	ENSG00000198796	NA	nonsynonymous SNV	ENSG00000198796:ENST00000361673:exon5:c.T2748A:p.N916K	NA	NA	18q21.32	NA	Name=Pol2-4H8	Name=3	NA	rs4940404	0.43	0.43	0.431	0.404153	0.5726	0.2361	0.4294	0.4312	0.3497	0.57	0.24	0.51	0.38	0.4701	0.57	0.06	T	0.886	P	0.381	B	0.290	N	1.000	P	1.7	L	0.58	T	-0.906	T	0.000	T	0.013	3.315	17.15	2.8	0.915	-0.367	5.569	3.31482	3.31482	0	0.533953	0.450295	NA	0.529	NA	9.2566804
726	14	74759477	74759477	C	T	exonic	ABCD4	NA	nonsynonymous SNV	ABCD4:NM_005050:exon9:c.G910A:p.A304T	exonic	ENSG00000119688	NA	nonsynonymous SNV	ENSG00000119688:ENST00000298816:exon7:c.G598A:p.A200T,ENSG00000119688:ENST00000356924:exon9:c.G910A:p.A304T	Score=581;Name=lod=307	NA	14q24.3	NA	NA	NA	NA	rs4148077	0.27	0.27	0.268	0.270367	0.3857	0.247	0.2723	0.1475	0.3405	0.37	0.24	0.29	0.13	0.3285	0.37	0.79	T	0.003	B	0.003	B	0.001	N	0.000	P	0.72	N	-3.47	D	-1.059	T	0.000	T	0.329	1.783	11.92	2.14	0.453	0.645	4.363	1.782746	1.782746	0.7	0.363837	0.197458	NA	0.275	NA	9.2552964
727	3	187088812	187088812	C	T	exonic	RTP4	NA	nonsynonymous SNV	RTP4:NM_022147:exon2:c.C392T:p.T131M	exonic	ENSG00000136514	NA	nonsynonymous SNV	ENSG00000136514:ENST00000259030:exon2:c.C392T:p.T131M	NA	NA	3q27.3	NA	NA	NA	NA	rs3821812	0.41	0.41	0.375	0.384385	0.3469	0.7351	0.4942	0.1399	0.3139	0.34	0.69	0.43	0.16	0.3825	0.69	0.26	T	0.23	B	0.031	B	0.000	N	1.000	P	-0.55	N	1.94	T	-0.984	T	0.000	T	0.053	-0.489	1.751	-7.38	-2.845	-1.461	3.293	-0.489207	NA	0.32	0.35093	0.20699	NA	0.261	NA	9.2530034
727	20	57769140	57769140	G	C	exonic	ZNF831	NA	nonsynonymous SNV	ZNF831:NM_178457:exon1:c.G3066C:p.L1022F	exonic	ENSG00000124203	NA	nonsynonymous SNV	ENSG00000124203:ENST00000371030:exon1:c.G3066C:p.L1022F	NA	NA	20q13.32	NA	NA	NA	NA	rs55786258	0.18	0.18	0.14	0.168331	0.1899	0.2718	0.2378	0.0477	0.1534	0.21	0.21	0.22	0.06	0.2067	0.22	0.04	D	0.523	P	0.073	B	0.001	N	1.000	P	0	N	3.62	T	-0.959	T	0.000	T	0.025	1.524	11.05	-2.88	-0.261	.	3.886	1.523625	1.523625	0.3	0.185385	0.061465	NA	0.072	NA	9.2513484
727	7	82582846	82582846	C	T	exonic	PCLO	NA	nonsynonymous SNV	PCLO:NM_014510:exon5:c.G7423A:p.V2475I,PCLO:NM_033026:exon5:c.G7423A:p.V2475I	exonic	ENSG00000186472	NA	nonsynonymous SNV	ENSG00000186472:ENST00000333891:exon5:c.G7423A:p.V2475I,ENSG00000186472:ENST00000423517:exon5:c.G7423A:p.V2475I	Score=596;Name=lod=354	NA	7q21.11	NA	NA	NA	NA	rs10954696	0.33	0.33	0.287	0.320288	0.3608	0.4425	0.389	0.1021	0.3988	0.37	0.44	0.37	0.09	0.3611	0.44	0	D	0.001	B	0.002	B	.	.	0.001	P	1.5	L	2.37	T	-0.948	T	0.000	T	0.016	-0.97	0.307	2.62	0.847	-0.776	8.800	-0.97032	NA	0.13	0.361279	0.137084	NA	0.254	NA	9.2501544
727	19	9066259	9066259	T	C	exonic	MUC16	NA	nonsynonymous SNV	MUC16:NM_024690:exon3:c.A21187G:p.T7063A	exonic	ENSG00000181143	NA	nonsynonymous SNV	ENSG00000181143:ENST00000397910:exon3:c.A21187G:p.T7063A	NA	NA	19p13.2	NA	NA	NA	NA	rs17000770	0.34	0.34	0.336	0.351038	0.3489	0.2768	0.3746	0.388	0.363	0.36	0.3	0.37	0.34	0.3639	0.47	0	D	0.673	P	0.533	P	.	.	.	.	1.24	L	1.75	T	-0.927	T	0.000	T	0.029	0.136	4.731	-0.117	-0.128	1.613	5.386	0.136008	NA	0.08	0.370836	0.36814	ID=COSM1129649,COSM1129651,COSM1129650;OCCURENCE=1(prostate)	0.333	NA	9.2496974
727	10	26355992	26355992	A	G	exonic	MYO3A	NA	nonsynonymous SNV	MYO3A:NM_017433:exon11:c.A1042G:p.I348V	exonic	ENSG00000095777	NA	nonsynonymous SNV	ENSG00000095777:ENST00000543632:exon10:c.A1042G:p.I348V,ENSG00000095777:ENST00000265944:exon11:c.A1042G:p.I348V	Score=539;Name=lod=206	NA	10p12.1	NA	NA	NA	NA	rs3824699	0.67	0.67	0.654	0.66274	0.7217	0.6181	0.6311	0.6929	0.6299	0.72	0.62	0.62	0.67	0.6786	0.72	1	T	0.0	B	0.001	B	0.019	N	0.721	P	-1.59	N	-0.53	T	-0.922	T	0.000	T	0.065	-0.914	0.41	2.73	0.067	2.019	9.617	-0.91367	NA	1	0.683837	0.679982	NA	0.681	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000039019.1;CLNDSDB=.;CLNDSDBID=.	9.2491964
727	3	196435534	196435534	T	C	exonic	CEP19	NA	nonsynonymous SNV	CEP19:NM_032898:exon2:c.A7G:p.M3V	exonic	ENSG00000174007	NA	nonsynonymous SNV	ENSG00000174007:ENST00000409690:exon2:c.A7G:p.M3V	NA	NA	3q29	NA	Name=GATA3_(SC-268),STAT3,AP-2alpha,GTF2F1_(RAP-74),CEBPB,p300_(N-15),BAF170,AP-2gamma	Name=38	NA	rs6776064	0.43	0.43	0.409	0.438099	0.3459	0.5952	0.3184	0.4319	0.4642	0.36	0.61	0.32	0.44	0.3851	0.61	0.97	T	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.935	T	0.000	T	0.002	-2.166	0.005	2.89	0.535	-0.082	7.318	-2.165644	NA	1	0.354297	0.394997	NA	0.522	NA	9.2480364
727	14	20876189	20876189	G	A	exonic	TEP1	NA	nonsynonymous SNV	TEP1:NM_007110:exon2:c.C410T:p.T137M	exonic	ENSG00000129566	NA	nonsynonymous SNV	ENSG00000129566:ENST00000262715:exon2:c.C410T:p.T137M,ENSG00000129566:ENST00000555727:exon2:c.C410T:p.T137M,ENSG00000129566:ENST00000556549:exon2:c.C410T:p.T137M,ENSG00000129566:ENST00000556935:exon2:c.C410T:p.T137M	NA	NA	14q11.2	NA	NA	NA	NA	rs10083536	0.03	0.03	0.038	0.0315495	0.0268	NA	0.0159	0.0802	0.0143	0.03	NA	0.01	0.09	0.0283	0.09	0.13	T	0.0	B	0.0	B	0.029	N	1.000	N	-0.345	N	1.46	T	-1.062	T	0.003	T	0.059	0.96	8.918	-8.33	-1.108	-0.671	9.306	0.96042	NA	0.09	0.030233	0.070813	NA	0.014	NA	9.2480004
727	22	23541488	23541488	C	T	intronic	BCR	NA	NA	NA	intronic	ENSG00000186716	NA	NA	NA	NA	NA	22q11.23	NA	NA	Name=36	NA	rs2071436	0.25	0.25	0.224	0.226438	0.2356	0.3581	0.3429	0.0809	0.1953	0.25	0.38	0.27	0.09	0.263	0.38	0.02	D	.	.	.	.	.	.	1.000	P	.	.	.	.	-1.021	T	0.000	T	.	-0.115	3.437	-6.14	-2.747	-1.992	8.577	-0.114821	NA	0	0.254897	0.121005	NA	0.203	NA	9.246503
728	22	46763671	46763671	A	G	exonic	CELSR1	NA	synonymous SNV	CELSR1:NM_014246:exon28:c.T8034C:p.D2678D	exonic	ENSG00000075275	NA	synonymous SNV	ENSG00000075275:ENST00000262738:exon28:c.T8034C:p.D2678D	Score=405;Name=lod=59	NA	22q13.31	Score=756;Name=V$PAX6_01	Name=GABP,Znf143_(16618-1-AP),YY1_(C-20),IRF4_(M-17),SMC3_(ab9263),Rad21,CTCF,JunD,CTCF_(SC-5916),PAX5-C20,CTCF_(C-20),ZEB1_(SC-25388),TCF12	Name=103	NA	rs7285515	0.21	0.21	0.211	0.224042	0.1292	0.002	0.1167	0.6664	0.0286	0.11	0.0017	0.13	0.65	0.171	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.519552	NA	NA	0.122034	0.578061	NA	0.268	NA	9.2444326
728	3	137787041	137787041	C	T	exonic	DZIP1L	NA	nonsynonymous SNV	DZIP1L:NM_173543:exon13:c.G1784A:p.G595E	exonic	ENSG00000158163	NA	nonsynonymous SNV	ENSG00000158163:ENST00000327532:exon13:c.G1784A:p.G595E	NA	NA	3q22.3	Score=802;Name=V$OLF1_01	NA	NA	NA	rs115489792	0.01	0.01	0.007	0.00998403	0.0308	NA	0.0202	0.0008	0.0041	0.03	NA	0.02	0.002	0.0239	0.034	0.34	T	0.002	B	0.004	B	0.083	N	1.000	N	0	N	1.2	T	-1.043	T	0.014	T	0.041	1.222	9.958	2.03	0.623	0.308	7.079	1.222121	NA	0.16	0.034302	0.00749	NA	NA	NA	9.2443314
728	2	175263063	175263063	G	A	exonic	SCRN3	NA	nonsynonymous SNV	SCRN3:NM_024583:exon2:c.G52A:p.D18N	exonic	ENSG00000144306	NA	nonsynonymous SNV	ENSG00000144306:ENST00000548031:exon1:c.G52A:p.D18N,ENSG00000144306:ENST00000272732:exon2:c.G52A:p.D18N,ENSG00000144306:ENST00000424069:exon2:c.G52A:p.D18N,ENSG00000144306:ENST00000427038:exon2:c.G52A:p.D18N,ENSG00000144306:ENST00000437944:exon2:c.G52A:p.D18N,ENSG00000144306:ENST00000548868:exon2:c.G52A:p.D18N,ENSG00000144306:ENST00000458563:exon3:c.G52A:p.D18N	NA	NA	2q31.1	NA	NA	NA	NA	rs10497410	0.1	0.1	0.086	0.0850639	0.2127	0.006	0.1556	0.0121	0.0838	0.21	0.01	0.17	0.01	0.1508	0.23	0.69	T	0.545	P	0.094	B	0.008	N	0.000	P	1.085	L	3.01	T	-1.003	T	0.000	T	0.085	1.687	11.6	4.25	0.881	6.412	12.073	1.68675	1.68675	0.61	0.226512	0.046074	NA	0.116	NA	9.2433214
728	14	73989816	73989816	C	T	exonic	HEATR4	NA	nonsynonymous SNV	HEATR4:NM_203309:exon2:c.G41A:p.C14Y,HEATR4:NM_001220484:exon3:c.G41A:p.C14Y	exonic	ENSG00000187105	NA	nonsynonymous SNV	ENSG00000187105:ENST00000334988:exon2:c.G41A:p.C14Y,ENSG00000187105:ENST00000556455:exon2:c.G41A:p.C14Y,ENSG00000187105:ENST00000553558:exon3:c.G41A:p.C14Y,ENSG00000187105:ENST00000557603:exon3:c.G41A:p.C14Y,ENSG00000187105:ENST00000563329:exon4:c.G41A:p.C14Y	NA	NA	14q24.3	NA	NA	NA	NA	rs28552441	0.03	0.03	0.028	0.0335463	0.0487	0.002	0.0375	0.0575	0.0153	0.04	NA	0.05	0.05	0.0414	0.054	.	.	.	.	.	.	.	.	1.000	N	0.695	N	1.88	T	-0.999	T	0.005	T	0.102	0.062	4.337	-5.36	-0.779	-3.076	2.155	0.062005	NA	NA	NA	NA	NA	0.036	NA	9.2432334
728	18	5416221	5416221	C	T	exonic	EPB41L3	NA	nonsynonymous SNV	EPB41L3:NM_012307:exon13:c.G1663A:p.A555T	exonic	ENSG00000082397	NA	nonsynonymous SNV	ENSG00000082397:ENST00000341928:exon13:c.G1663A:p.A555T,ENSG00000082397:ENST00000342933:exon13:c.G1663A:p.A555T	NA	NA	18p11.31	NA	NA	NA	NA	rs9966357	0.05	0.05	0.055	0.0503195	0.0268	NA	0.0187	0.121	0.0532	0.03	NA	0.02	0.15	0.0328	0.15	0.59	T	0.0	B	0.0	B	.	.	1.000	P	0	N	-1.37	T	-1.096	T	0.001	T	0.017	-1.93	0.008	-11.1	-4.798	-2.647	6.690	-1.93012	NA	NA	0.031279	0.106673	NA	0.051	NA	9.2424544
728	5	7878192	7878192	T	C	exonic	MTRR	NA	synonymous SNV	MTRR:NM_002454:exon5:c.T537C:p.L179L,MTRR:NM_024010:exon5:c.T618C:p.L206L	exonic	ENSG00000124275	NA	synonymous SNV	ENSG00000124275:ENST00000264668:exon5:c.T618C:p.L206L,ENSG00000124275:ENST00000440940:exon5:c.T537C:p.L179L	NA	NA	5p15.31	NA	NA	Name=46	NA	rs161870	0.23	0.23	0.224	0.252995	0.1352	0.1696	0.3516	0.4357	0.1431	0.12	0.18	0.31	0.39	0.1711	0.39	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.992	T	0.000	T	.	0.292	5.58	-10.9	-2.045	-3.799	2.513	0.291749	NA	NA	0.118372	0.377667	NA	0.341	NA	9.2419946
728	11	5862937	5862937	C	A	exonic	OR52E6	NA	nonsynonymous SNV	OR52E6:NM_001005167:exon1:c.G191T:p.C64F	exonic	ENSG00000205409	NA	nonsynonymous SNV	ENSG00000205409:ENST00000329322:exon1:c.G191T:p.C64F,ENSG00000205409:ENST00000379946:exon2:c.G203T:p.C68F	Score=387;Name=lod=50	NA	11p15.4	NA	NA	NA	NA	rs4495918	0.4	0.4	0.391	0.384185	0.3728	0.4593	0.3184	0.379	0.3722	0.39	0.46	0.33	0.41	0.3692	0.46	1	T	0.0	B	0.0	B	0.001	N	0.000	P	-3.875	N	5.7	T	-0.985	T	0.000	T	0.079	-2.527	0.003	3.64	0.475	4.740	9.114	-2.527363	NA	1	0.350093	0.368015	NA	0.406	NA	9.2412404
728	11	5862653	5862653	T	C	exonic	OR52E6	NA	nonsynonymous SNV	OR52E6:NM_001005167:exon1:c.A475G:p.I159V	exonic	ENSG00000205409	NA	nonsynonymous SNV	ENSG00000205409:ENST00000329322:exon1:c.A475G:p.I159V,ENSG00000205409:ENST00000379946:exon2:c.A487G:p.I163V	NA	NA	11p15.4	NA	NA	NA	NA	rs4357719	0.4	0.4	0.408	0.384185	0.3728	0.4593	0.3184	0.3782	0.3732	0.39	0.46	0.33	0.41	0.3693	0.46	0.27	T	0.0	B	0.002	B	0.103	N	1.000	P	0.49	N	1.19	T	-1.020	T	0.000	T	0.009	-1.652	0.012	-6.91	-3.731	-12.782	0.801	-1.651578	NA	0.37	0.350209	0.366879	NA	0.406	NA	9.2410244
728	1	228559430	228559430	G	A	exonic	OBSCN	NA	nonsynonymous SNV	OBSCN:NM_001098623:exon94:c.G20951A:p.R6984Q,OBSCN:NM_001271223:exon105:c.G23822A:p.R7941Q	exonic	ENSG00000154358	NA	nonsynonymous SNV	ENSG00000154358:ENST00000422127:exon94:c.G20951A:p.R6984Q,ENSG00000154358:ENST00000366707:exon100:c.G13853A:p.R4618Q,ENSG00000154358:ENST00000570156:exon105:c.G23822A:p.R7941Q	NA	NA	1q42.13	NA	Name=ZNF263	NA	NA	rs41305136	0.02	0.02	0.012	0.0217652	0.0298	NA	0.0159	0.0008	0.0685	0.03	0.0035	0.02	0.002	0.0317	0.031	0.61	T	0.0	B	0.0	B	.	.	1.000	N	0	N	0.07	T	-1.057	T	0.028	T	0.254	2.722	15.06	-3.53	-0.556	-0.312	2.442	2.7217	2.7217	0.36	0.030851	0.005238	NA	NA	NA	9.2409824
728	11	5862984	5862984	G	C	exonic	OR52E6	NA	nonsynonymous SNV	OR52E6:NM_001005167:exon1:c.C144G:p.F48L	exonic	ENSG00000205409	NA	nonsynonymous SNV	ENSG00000205409:ENST00000329322:exon1:c.C144G:p.F48L,ENSG00000205409:ENST00000379946:exon2:c.C156G:p.F52L	NA	NA	11p15.4	NA	NA	NA	NA	rs10769272	0.4	0.4	0.404	0.384185	0.3728	0.4593	0.3184	0.379	0.3722	0.39	0.46	0.33	0.41	0.3696	0.46	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-2.74	N	8.17	T	-0.988	T	0.000	T	0.032	-1.558	0.015	-7.27	-1.655	-7.918	4.005	-1.558484	NA	1	0.350326	0.368015	ID=COSM1127733;OCCURENCE=1(prostate)	0.406	NA	9.2406074
728	11	5863013	5863013	T	C	exonic	OR52E6	NA	nonsynonymous SNV	OR52E6:NM_001005167:exon1:c.A115G:p.I39V	exonic	ENSG00000205409	NA	nonsynonymous SNV	ENSG00000205409:ENST00000329322:exon1:c.A115G:p.I39V,ENSG00000205409:ENST00000379946:exon2:c.A127G:p.I43V	NA	NA	11p15.4	NA	NA	NA	NA	rs4362173	0.4	0.4	0.404	0.384185	0.3728	0.4593	0.3184	0.379	0.3722	0.39	0.46	0.33	0.41	0.3699	0.46	1	T	0.0	B	0.001	B	0.384	N	1.000	P	0.235	N	8.43	T	-1.020	T	0.000	T	0.014	-2.612	0	-3.21	-0.999	-5.184	7.592	-2.611809	NA	1	0.350442	0.369318	NA	0.406	NA	9.2401914
728	18	33718326	33718326	A	C	exonic	ELP2	NA	nonsynonymous SNV	ELP2:NM_001242875:exon4:c.A382C:p.T128P,ELP2:NM_001242876:exon4:c.A382C:p.T128P,ELP2:NM_001242877:exon4:c.A382C:p.T128P,ELP2:NM_001242878:exon4:c.A382C:p.T128P,ELP2:NM_001242879:exon4:c.A382C:p.T128P,ELP2:NM_018255:exon4:c.A382C:p.T128P	exonic	ENSG00000134759	NA	nonsynonymous SNV	ENSG00000134759:ENST00000350494:exon4:c.A382C:p.T128P,ENSG00000134759:ENST00000351393:exon4:c.A382C:p.T128P,ENSG00000134759:ENST00000358232:exon4:c.A382C:p.T128P,ENSG00000134759:ENST00000423854:exon4:c.A382C:p.T128P,ENSG00000134759:ENST00000442325:exon4:c.A382C:p.T128P,ENSG00000134759:ENST00000539560:exon4:c.A382C:p.T128P,ENSG00000134759:ENST00000542824:exon4:c.A382C:p.T128P	Score=383;Name=lod=48	NA	18q12.2	NA	NA	NA	NA	rs1785934	0.35	0.35	0.354	0.320487	0.3797	0.2024	0.3847	0.382	0.2526	0.4	0.19	0.43	0.39	0.3427	0.43	0.28	T	0.011	B	0.02	B	0.015	N	1.000	P	0.98	L	2.17	T	-0.949	T	0.000	T	0.16	0.683	7.649	3.49	1.017	0.654	4.858	0.68253	NA	0.12	0.371279	0.366319	NA	0.326	NA	9.2396544
728	19	35719106	35719106	A	G	exonic	FAM187B	NA	nonsynonymous SNV	FAM187B:NM_152481:exon1:c.T478C:p.C160R	exonic	ENSG00000177558	NA	nonsynonymous SNV	ENSG00000177558:ENST00000324675:exon1:c.T478C:p.C160R	Score=340;Name=lod=32	NA	19q13.12	NA	NA	NA	NA	rs565791	0.5	0.5	0.465	0.499601	0.7177	0.1915	0.611	0.4266	0.6125	0.71	0.18	0.64	0.43	0.6431	0.73	1	T	0.0	B	0.0	B	0.000	N	0.215	P	-2.045	N	2.41	T	-0.970	T	0.000	T	0.078	-1.466	0.019	5.07	1.280	2.272	10.065	-1.466188	NA	1	0.733488	0.461189	NA	0.529	NA	9.2390454
728	9	117051020	117051020	A	G	exonic	COL27A1	NA	synonymous SNV	COL27A1:NM_032888:exon43:c.A4083G:p.G1361G	exonic	ENSG00000196739	NA	synonymous SNV	ENSG00000196739:ENST00000356083:exon43:c.A4083G:p.G1361G	Score=443;Name=lod=84	NA	9q32	Score=845;Name=V$RFX1_01	Name=CTCF	Name=10	NA	rs1687410	0.23	0.23	0.223	0.234225	0.1372	0.2827	0.1988	0.3631	0.135	0.13	0.28	0.21	0.33	0.158	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.649445	NA	NA	0.132791	0.326827	NA	0.167	NA	9.2386756
728	17	2203025	2203025	T	G	exonic	SMG6	NA	nonsynonymous SNV	SMG6:NM_017575:exon2:c.A1022C:p.N341T	exonic	ENSG00000070366	NA	nonsynonymous SNV	ENSG00000070366:ENST00000263073:exon2:c.A1022C:p.N341T,ENSG00000070366:ENST00000544865:exon2:c.A929C:p.N310T	Score=431;Name=lod=75	NA	17p13.3	NA	NA	NA	NA	rs1885987	0.26	0.26	0.219	0.229433	0.3827	0.1716	0.438	0.0469	0.2301	0.37	0.17	0.45	0.06	0.3254	0.45	0.41	T	0.001	B	0.004	B	0.743	N	0.000	P	0	N	3.15	T	-0.939	T	0.000	T	0.095	0.92	8.744	2.3	0.252	3.302	10.136	0.919722	NA	0	0.386628	0.093963	NA	0.246	NA	9.2386054
728	11	12315915	12315915	A	G	exonic	MICALCL	NA	nonsynonymous SNV	MICALCL:NM_032867:exon3:c.A937G:p.S313G	exonic	ENSG00000133808	NA	nonsynonymous SNV	ENSG00000133808:ENST00000256186:exon3:c.A937G:p.S313G	NA	NA	11p15.3	NA	NA	NA	NA	rs1493954	0.49	0.49	0.489	0.53095	0.3429	0.6786	0.4755	0.618	0.4939	0.34	0.67	0.43	0.58	0.416	0.67	0.4	T	0.076	B	0.029	B	0.006	N	1.000	P	1.445	L	1.17	T	-0.979	T	0.000	T	0.063	1.101	9.494	5.41	2.049	3.504	11.819	1.101419	NA	0.09	0.335871	0.545059	NA	0.464	NA	9.2385624
728	5	35084647	35084647	T	C	exonic	PRLR	NA	nonsynonymous SNV	PRLR:NM_001204315:exon4:c.A298G:p.I100V,PRLR:NM_001204316:exon4:c.A298G:p.I100V,PRLR:NM_001204317:exon4:c.A298G:p.I100V,PRLR:NM_001204318:exon4:c.A298G:p.I100V,PRLR:NM_000949:exon5:c.A298G:p.I100V	exonic	ENSG00000113494	NA	nonsynonymous SNV	ENSG00000113494:ENST00000397391:exon2:c.A85G:p.I29V,ENSG00000113494:ENST00000231423:exon3:c.A298G:p.I100V,ENSG00000113494:ENST00000310101:exon3:c.A298G:p.I100V,ENSG00000113494:ENST00000348262:exon3:c.A298G:p.I100V,ENSG00000113494:ENST00000513753:exon3:c.A298G:p.I100V,ENSG00000113494:ENST00000542609:exon3:c.A298G:p.I100V,ENSG00000113494:ENST00000382002:exon5:c.A298G:p.I100V,ENSG00000113494:ENST00000503330:exon5:c.A298G:p.I100V,ENSG00000113494:ENST00000509839:exon5:c.A298G:p.I100V,ENSG00000113494:ENST00000514206:exon5:c.A298G:p.I100V	Score=343;Name=lod=33	NA	5p13.2	NA	NA	NA	NA	rs2228482	0.05	0.05	0.064	0.0714856	0.0229	0.0327	0.0461	0.1392	0.0879	0.02	0.04	0.04	0.13	0.0434	0.13	0.51	T	0.007	B	0.013	B	0.000	N	0.000	P	0.98	L	1.6	T	-1.024	T	0.005	T	0.142	-0.385	2.194	3.4	0.473	0.201	5.789	-0.384548	NA	0.51	0.02907	0.124376	NA	0.051	NA	9.2379634
728	1	36636854	36636854	G	A	exonic	MAP7D1	NA	nonsynonymous SNV	MAP7D1:NM_018067:exon2:c.G329A:p.R110Q	exonic	ENSG00000116871	NA	nonsynonymous SNV	ENSG00000116871:ENST00000316156:exon2:c.G329A:p.R110Q,ENSG00000116871:ENST00000373150:exon2:c.G329A:p.R110Q,ENSG00000116871:ENST00000373151:exon2:c.G329A:p.R110Q,ENSG00000116871:ENST00000429533:exon2:c.G212A:p.R71Q,ENSG00000116871:ENST00000530729:exon2:c.G212A:p.R71Q	Score=467;Name=lod=105	NA	1p34.3	NA	NA	NA	NA	rs112601844	0.02	0.02	0.009	0.0115815	0.0318	NA	0.0173	0.0015	0.0123	0.03	NA	0.02	0.002	0.0279	0.038	0.26	T	0.342	B	0.016	B	0.599	N	1.000	D	1.1	L	3.53	T	-0.894	T	0.003	T	0.147	2.265	13.53	1.99	0.711	0.146	5.287	2.265438	2.265438	0.09	0.037907	0.010213	NA	0.014	NA	9.2357264
729	1	44595410	44595410	A	G	exonic	KLF17	NA	nonsynonymous SNV	KLF17:NM_173484:exon2:c.A467G:p.N156S	exonic	ENSG00000171872	NA	nonsynonymous SNV	ENSG00000171872:ENST00000372299:exon2:c.A467G:p.N156S	NA	NA	1p34.1	NA	NA	NA	NA	rs2485652	0.32	0.32	0.301	0.275559	0.3966	0.4236	0.2594	0.0915	0.2587	0.38	0.44	0.3	0.1	0.3305	0.44	0.94	T	0.0	B	0.0	B	0.163	N	1.000	P	-0.46	N	3.17	T	-0.946	T	0.000	T	0.007	-1.363	0.027	-9.27	-2.352	-2.032	8.585	-1.362961	NA	0.89	0.372558	0.144349	NA	0.29	NA	9.2336754
729	19	11979305	11979305	C	G	exonic	ZNF439	NA	nonsynonymous SNV	ZNF439:NM_152262:exon3:c.C1421G:p.A474G	exonic	ENSG00000171291	NA	nonsynonymous SNV	ENSG00000171291:ENST00000304030:exon3:c.C1421G:p.A474G,ENSG00000171291:ENST00000455282:exon3:c.C1013G:p.A338G	Score=343;Name=lod=33	NA	19p13.2	NA	Name=KAP1,SETDB1	NA	NA	rs72994214	0.04	0.04	0.026	0.0323482	0.0388	0.0734	0.0288	0.0023	0.0266	0.03	0.08	0.04	0.01	0.0296	0.08	0.06	T	0.039	B	0.094	B	.	.	0.994	P	0.14	N	1.22	T	-1.046	T	0.003	T	0.037	0.744	7.948	0.749	0.716	0.180	6.108	0.744179	NA	0.07	0.031395	0.007036	NA	0.007	NA	9.2335384
729	1	247752019	247752019	G	C	exonic	OR2G2	NA	nonsynonymous SNV	OR2G2:NM_001001915:exon1:c.G358C:p.V120L	exonic	ENSG00000177489	NA	nonsynonymous SNV	ENSG00000177489:ENST00000320065:exon1:c.G358C:p.V120L	NA	NA	1q44	NA	NA	NA	NA	rs1151687	0.61	0.61	0.554	0.579473	0.7147	0.7599	0.6686	0.1641	0.7526	0.73	0.77	0.69	0.17	0.6779	0.77	0.01	D	0.112	B	0.082	B	0.007	U	1.000	P	1.98	M	3.49	T	-1.090	T	0.000	T	0.254	2.254	13.5	3.37	1.008	0.628	9.752	2.254468	2.254468	0.01	0.70814	0.251248	ID=COSM1178405;OCCURENCE=1(prostate),1(meninges)	0.63	NA	9.2325934
729	22	37637653	37637653	G	C	exonic	RAC2	NA	synonymous SNV	RAC2:NM_002872:exon2:c.C81G:p.A27A	exonic	ENSG00000128340	NA	synonymous SNV	ENSG00000128340:ENST00000249071:exon2:c.C81G:p.A27A,ENSG00000128340:ENST00000401529:exon2:c.C81G:p.A27A,ENSG00000128340:ENST00000405484:exon2:c.C60G:p.A20A,ENSG00000128340:ENST00000441619:exon3:c.C81G:p.A27A	Score=546;Name=lod=220	NA	22q13.1	Score=797;Name=V$OLF1_01	Name=Pol2,PU.1,ELF1_(SC-631)	Name=21	NA	rs2239774	0.17	0.17	0.156	0.189696	0.1372	0.2788	0.0994	0.2035	0.1973	0.13	0.22	0.12	0.21	0.1547	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.364076	NA	NA	0.142442	0.183613	NA	0.152	NA	9.2323246
729	1	207790088	207790088	C	G	exonic	CR1	NA	nonsynonymous SNV	CR1:NM_000573:exon33:c.C5480G:p.P1827R,CR1:NM_000651:exon41:c.C6830G:p.P2277R	exonic	ENSG00000203710	NA	nonsynonymous SNV	ENSG00000203710:ENST00000367051:exon33:c.C5480G:p.P1827R,ENSG00000203710:ENST00000367052:exon33:c.C5480G:p.P1827R,ENSG00000203710:ENST00000367053:exon33:c.C5480G:p.P1827R,ENSG00000203710:ENST00000400960:exon33:c.C5480G:p.P1827R,ENSG00000203710:ENST00000367049:exon41:c.C6830G:p.P2277R	NA	NA	1q32.2	NA	NA	NA	NA	rs3811381	0.2	0.2	0.157	0.26278	0.1809	0.3224	0.2608	0.1172	0.4836	0.17	0.23	0.28	0.13	0.2403	0.28	0.64	T	0.643	P	0.142	B	.	.	1.000	P	-0.115	N	2.0	T	-0.960	T	0.000	T	0.449	-1.746	0.01	-5.58	-1.266	-0.775	3.197	-1.745772	NA	0.34	0.182346	0.127301	NA	0.181	NA	9.2297874
729	5	54410099	54410099	G	A	exonic	CDC20B	NA	nonsynonymous SNV	CDC20B:NM_001145734:exon11:c.C1381T:p.R461W,CDC20B:NM_001170402:exon12:c.C1507T:p.R503W,CDC20B:NM_152623:exon12:c.C1495T:p.R499W	exonic	ENSG00000164287	NA	nonsynonymous SNV	ENSG00000164287:ENST00000322374:exon11:c.C1381T:p.R461W,ENSG00000164287:ENST00000296733:exon12:c.C1495T:p.R499W,ENSG00000164287:ENST00000381375:exon12:c.C1507T:p.R503W	NA	NA	5q11.2	NA	NA	NA	NA	rs444527	0.16	0.16	0.132	0.169529	0.2127	0.1865	0.147	0.0401	0.2986	0.22	0.16	0.16	0.05	0.2011	0.22	0.01	D	0.995	D	0.84	P	0.286	N	1.000	P	0.815	L	0.18	T	-1.091	T	0.000	T	0.202	2.897	15.65	1.7	0.876	0.257	4.240	2.897041	2.897041	0.2	0.19093	0.06128	ID=COSM149836;OCCURENCE=1(stomach)	0.087	NA	9.2286034
729	1	201860626	201860626	A	G	exonic	SHISA4	NA	nonsynonymous SNV	SHISA4:NM_198149:exon4:c.A477G:p.I159M	exonic	ENSG00000198892	NA	nonsynonymous SNV	ENSG00000198892:ENST00000362011:exon4:c.A477G:p.I159M	Score=551;Name=lod=232	NA	1q32.1	NA	NA	NA	NA	rs2250377	0.76	0.76	0.745	0.784345	0.6988	0.8978	0.7767	0.8041	0.7342	0.68	0.89	0.75	0.74	0.7233	0.89	0.41	T	0.0	B	0.0	B	0.009	N	1.000	P	0	N	0.97	T	-1.021	T	0.000	T	0.087	0.805	8.231	5.46	1.314	1.845	12.278	0.804709	NA	0.14	0.682791	0.787789	NA	0.841	NA	9.2284424
729	19	37487866	37487866	A	T	exonic	ZNF568	NA	nonsynonymous SNV	ZNF568:NM_001204839:exon9:c.A1081T:p.S361C,ZNF568:NM_001204838:exon10:c.A1273T:p.S425C	exonic	ENSG00000198453	NA	nonsynonymous SNV	ENSG00000198453:ENST00000433993:exon5:c.A877T:p.S293C,ENSG00000198453:ENST00000455427:exon9:c.A1081T:p.S361C,ENSG00000198453:ENST00000444991:exon10:c.A1273T:p.S425C	Score=259;Name=lod=15	NA	19q13.12	NA	NA	NA	NA	rs1667363	0.47	0.47	0.45	0.497005	0.5119	0.25	0.5346	0.6006	0.5695	0.52	0.26	0.52	0.61	0.5939	0.61	1	T	0.0	B	0.0	B	.	.	0.000	P	-3.805	N	3.89	T	-0.956	T	0.000	T	0.238	-0.083	3.594	3.74	0.615	4.576	7.920	-0.082997	NA	1	NA	NA	NA	0.493	NA	9.2275334
729	11	59132798	59132798	G	C	exonic	OR5AN1	NA	nonsynonymous SNV	OR5AN1:NM_001004729:exon1:c.G867C:p.L289F	exonic	ENSG00000176495	NA	nonsynonymous SNV	ENSG00000176495:ENST00000313940:exon1:c.G867C:p.L289F	NA	NA	11q12.1	NA	NA	NA	NA	rs7941190	0.66	0.66	0.639	0.673323	0.7227	0.744	0.7363	0.5061	0.7311	0.71	0.7	0.71	0.52	0.688	0.71	0.03	D	1.0	D	0.999	D	0.002	N	0.993	P	2.055	M	1.11	T	-0.933	T	0.000	T	0.11	2.568	14.55	1.4	0.184	0.022	4.616	2.568337	2.568337	0.02	0.695111	0.531577	NA	0.703	NA	9.2275224
729	17	56276940	56276940	A	C	exonic	EPX	NA	nonsynonymous SNV	EPX:NM_000502:exon9:c.A1322C:p.K441T	exonic	ENSG00000121053	NA	nonsynonymous SNV	ENSG00000121053:ENST00000225371:exon9:c.A1322C:p.K441T	NA	NA	17q22	Score=747;Name=V$MYOGNF1_01	NA	NA	NA	rs35750729	0.07	0.07	0.064	0.0676917	0.0318	0.0069	0.036	0.2005	0.0102	0.03	0.01	0.05	0.2	0.0431	0.2	0.22	T	0.259	B	0.165	B	0.648	N	1.000	P	1.36	L	-0.3	T	-1.056	T	0.000	T	0.085	2.199	13.31	-5.8	-0.719	0.003	8.410	2.199187	2.199187	0.44	0.031047	0.167272	NA	0.08	NA	9.2273864
729	1	181702616	181702616	G	A	exonic	CACNA1E	NA	nonsynonymous SNV	CACNA1E:NM_001205294:exon20:c.G2935A:p.G979S,CACNA1E:NM_000721:exon21:c.G2992A:p.G998S,CACNA1E:NM_001205293:exon21:c.G2992A:p.G998S	exonic	ENSG00000198216	NA	nonsynonymous SNV	ENSG00000198216:ENST00000358338:exon20:c.G2788A:p.G930S,ENSG00000198216:ENST00000360108:exon20:c.G2935A:p.G979S,ENSG00000198216:ENST00000526775:exon20:c.G2935A:p.G979S,ENSG00000198216:ENST00000357570:exon21:c.G2845A:p.G949S,ENSG00000198216:ENST00000367567:exon21:c.G1813A:p.G605S,ENSG00000198216:ENST00000367570:exon21:c.G2992A:p.G998S,ENSG00000198216:ENST00000367573:exon21:c.G2992A:p.G998S	NA	NA	1q25.3	NA	NA	NA	NA	rs41304253	0.02	0.02	0.016	0.0161741	0.0338	NA	0.0403	0.0023	0.0164	0.03	NA	0.05	0.0041	0.0293	0.05	1	T	0.0	B	0.001	B	0.032	N	1.000	N	0	N	-3.78	D	-0.249	T	0.202	T	0.044	0.949	8.868	1.61	0.966	0.515	1.751	0.948678	NA	0.82	0.044618	0.010233	NA	0.007	NA	9.2256154
730	19	37487873	37487873	C	A	exonic	ZNF568	NA	nonsynonymous SNV	ZNF568:NM_001204839:exon9:c.C1088A:p.A363E,ZNF568:NM_001204838:exon10:c.C1280A:p.A427E	exonic	ENSG00000198453	NA	nonsynonymous SNV	ENSG00000198453:ENST00000433993:exon5:c.C884A:p.A295E,ENSG00000198453:ENST00000455427:exon9:c.C1088A:p.A363E,ENSG00000198453:ENST00000444991:exon10:c.C1280A:p.A427E	NA	NA	19q13.12	Score=829;Name=V$CEBP_C	NA	NA	NA	rs1667364	0.47	0.47	0.461	0.497005	0.5119	0.25	0.5346	0.6014	0.5685	0.52	0.26	0.52	0.62	0.5966	0.62	1	T	0.0	B	0.0	B	.	.	1.000	P	-1.995	N	1.24	T	-0.917	T	0.000	T	0.137	-1.256	0.049	3.74	0.615	3.278	8.737	-1.255646	NA	1	NA	NA	NA	0.493	NA	9.2248334
730	1	160124875	160124875	G	A	exonic	ATP1A4	NA	nonsynonymous SNV	ATP1A4:NM_144699:exon3:c.G248A:p.G83D	exonic	ENSG00000132681	NA	nonsynonymous SNV	ENSG00000132681:ENST00000368081:exon3:c.G248A:p.G83D,ENSG00000132681:ENST00000477338:exon3:c.G248A:p.G83D	Score=405;Name=lod=59	NA	1q23.2	NA	Name=PU.1	NA	NA	rs6427504	0.71	0.71	0.716	0.693091	0.6958	0.6835	0.7104	0.7458	0.6166	0.68	0.68	0.7	0.77	0.6977	0.77	1	T	0.0	B	0.0	B	0.181	N	0.000	P	-2.97	N	-1.09	T	-1.035	T	0.022	T	0.045	-0.969	0.309	4.48	0.754	6.088	8.284	-0.968965	NA	1	0.715349	0.750113	NA	0.688	NA	9.2244844
730	19	6156483	6156483	T	C	exonic	ACSBG2	NA	nonsynonymous SNV	ACSBG2:NM_030924:exon5:c.T428C:p.V143A	exonic	ENSG00000130377	NA	nonsynonymous SNV	ENSG00000130377:ENST00000587227:exon1:c.T23C:p.V8A,ENSG00000130377:ENST00000252669:exon5:c.T428C:p.V143A,ENSG00000130377:ENST00000586696:exon5:c.T428C:p.V143A,ENSG00000130377:ENST00000588304:exon5:c.T278C:p.V93A,ENSG00000130377:ENST00000591403:exon5:c.T428C:p.V143A	Score=336;Name=lod=31	NA	19p13.3	NA	NA	NA	NA	rs4807840	0.73	0.73	0.714	0.712061	0.7127	0.7153	0.7478	0.7337	0.6534	0.72	0.73	0.75	0.75	0.7088	0.75	1	T	0.0	B	0.0	B	0.001	N	0.000	P	-3.505	N	1.19	T	-0.928	T	0.000	T	0.043	0.009	4.063	5.9	1.511	5.346	13.144	0.009457	NA	1	0.68814	0.723332	NA	0.717	NA	9.2236934
730	9	117792583	117792583	C	G	exonic	TNC	NA	nonsynonymous SNV	TNC:NM_002160:exon24:c.G6022C:p.E2008Q	exonic	ENSG00000041982	NA	nonsynonymous SNV	ENSG00000041982:ENST00000537320:exon16:c.G4111C:p.E1371Q,ENSG00000041982:ENST00000345230:exon17:c.G4111C:p.E1371Q,ENSG00000041982:ENST00000346706:exon18:c.G4384C:p.E1462Q,ENSG00000041982:ENST00000535648:exon19:c.G4657C:p.E1553Q,ENSG00000041982:ENST00000542877:exon19:c.G4933C:p.E1645Q,ENSG00000041982:ENST00000340094:exon20:c.G4930C:p.E1644Q,ENSG00000041982:ENST00000341037:exon21:c.G5476C:p.E1826Q,ENSG00000041982:ENST00000423613:exon21:c.G5203C:p.E1735Q,ENSG00000041982:ENST00000350763:exon24:c.G6022C:p.E2008Q	Score=381;Name=lod=47	NA	9q33.1	NA	NA	NA	NA	rs13321	0.67	0.67	0.696	0.668131	0.7207	0.5625	0.6772	0.7337	0.6278	0.75	0.54	0.65	0.73	0.6857	0.75	1	T	0.043	B	0.048	B	0.000	N	0.938	P	-0.375	N	-1.05	T	-1.062	T	0.000	T	0.177	0.065	4.353	5.35	1.405	6.277	16.561	0.06508	NA	1	0.704767	0.734907	NA	0.667	NA	9.2221664
730	19	40360928	40360928	G	A	exonic	FCGBP	NA	synonymous SNV	FCGBP:NM_003890:exon33:c.C15480T:p.R5160R	exonic	ENSG00000090920	NA	synonymous SNV	ENSG00000090920:ENST00000221347:exon33:c.C15480T:p.R5160R	Score=407;Name=lod=60	NA	19q13.2	Score=943;Name=V$CETS1P54_01	Name=TAF1	Name=7	NA	rs1053686	0.11	0.11	0.098	0.117812	0.1431	0.0387	0.1988	0.1271	0.1033	0.14	0.03	0.14	0.13	0.1448	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.194583	NA	NA	0.157791	0.156378	ID=COSM148622;OCCURENCE=1(stomach)	0.196	NA	9.2209756
730	5	149001551	149001551	A	C	exonic	ARHGEF37	NA	nonsynonymous SNV	ARHGEF37:NM_001001669:exon9:c.A1261C:p.M421L	exonic	ENSG00000183111	NA	nonsynonymous SNV	ENSG00000183111:ENST00000333677:exon9:c.A1261C:p.M421L	Score=444;Name=lod=85	NA	5q32	NA	NA	NA	NA	rs4629585	0.41	0.41	0.394	0.436901	0.34	0.5	0.4769	0.3797	0.5204	0.34	0.53	0.42	0.36	0.4185	0.53	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-2.19	N	0.85	T	-0.917	T	0.000	T	0.031	-1.223	0.062	4.1	0.956	0.122	8.822	-1.222824	NA	1	0.355456	0.380829	NA	0.312	NA	9.2193774
730	11	33054856	33054856	C	T	exonic	DEPDC7	NA	nonsynonymous SNV	DEPDC7:NM_001077242:exon9:c.C1391T:p.T464I,DEPDC7:NM_139160:exon9:c.C1364T:p.T455I	exonic	ENSG00000121690	NA	nonsynonymous SNV	ENSG00000121690:ENST00000241051:exon9:c.C1391T:p.T464I,ENSG00000121690:ENST00000311388:exon9:c.C1364T:p.T455I	NA	NA	11p13	NA	NA	NA	NA	rs17852859	0.02	0.02	0.012	0.0139776	0.0447	NA	0.0216	0.0015	0.0082	0.04	NA	0.02	0.002	0.0297	0.04	0.12	T	0.008	B	0.009	B	0.005	N	1.000	N	0.29	N	-1.75	D	-0.922	T	0.092	T	0.037	-0.78	0.73	2.33	0.279	0.099	8.295	-0.780275	NA	0.31	0.040354	0.007739	NA	0.109	NA	9.2185794
730	11	13032511	13032511	G	C	exonic	RASSF10	NA	nonsynonymous SNV	RASSF10:NM_001080521:exon1:c.G1388C:p.C463S	ncRNA_exonic	ENSG00000189431	NA	NA	NA	Score=272;Name=lod=17	NA	11p15.2	Score=678;Name=V$P53_01	Name=JunD,Max	Name=24	NA	rs55909156	0.07	0.07	0.069	0.0822684	0.0984	0.0645	0.0576	0.0257	0.1779	0.1	0.06	0.06	0.03	0.0904	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.364584	2.364584	0.79	0.092798	0.035933	NA	0.029	NA	9.218402
730	18	21140432	21140432	T	C	exonic	NPC1	NA	nonsynonymous SNV	NPC1:NM_000271:exon6:c.A644G:p.H215R	exonic	ENSG00000141458	NA	nonsynonymous SNV	ENSG00000141458:ENST00000269228:exon6:c.A644G:p.H215R	NA	Name=Obesity	18q11.2	NA	NA	NA	NA	rs1805081	0.24	0.24	0.21	0.21865	0.3837	0.256	0.2637	0.0197	0.2474	0.4	0.23	0.25	0.03	0.3287	0.4	0.48	T	0.0	B	0.0	B	0.484	N	1.000	P	0.665	N	-2.61	D	-1.039	T	0.000	T	0.018	1.164	9.736	-1.13	-0.172	0.589	0.395	1.163509	NA	0.57	0.402558	0.087835	NA	0.304	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000078484.3;CLNDSDB=.;CLNDSDBID=.	9.2183754
730	5	96118852	96118852	G	C	exonic	ERAP1	NA	nonsynonymous SNV	ERAP1:NM_001040458:exon15:c.C2188G:p.Q730E,ERAP1:NM_001198541:exon15:c.C2188G:p.Q730E,ERAP1:NM_016442:exon15:c.C2188G:p.Q730E	exonic	ENSG00000164307	NA	nonsynonymous SNV	ENSG00000164307:ENST00000296754:exon15:c.C2188G:p.Q730E,ENSG00000164307:ENST00000443439:exon15:c.C2188G:p.Q730E	Score=343;Name=lod=33	NA	5q15	NA	NA	NA	NA	rs27044	0.65	0.65	0.661	0.679313	0.7147	0.5714	0.6513	0.711	0.7311	0.71	0.54	0.65	0.68	0.6939	0.71	1	T	0.038	B	0.035	B	0.042	N	1.000	P	0.915	L	3.41	T	-0.976	T	0.000	T	0.098	-1.173	0.087	4.78	1.379	0.979	5.458	-1.172807	NA	1	0.708605	0.706083	NA	0.565	NA	9.2161284
731	17	48539035	48539035	T	C	exonic	ACSF2	NA	synonymous SNV	ACSF2:NM_025149:exon4:c.T495C:p.Y165Y	exonic	ENSG00000167107	NA	nonsynonymous SNV	ENSG00000167107:ENST00000506582:exon4:c.T412C:p.C138R	Score=439;Name=lod=81	NA	17q21.33	NA	NA	NA	NA	rs9674937	0.3	0.3	0.318	0.34405	0.2545	0.0863	0.2824	0.705	0.2577	0.25	0.08	0.28	0.66	0.2802	0.66	0	D	.	.	.	.	.	.	0.000	P	.	.	0.5	T	-0.914	T	0.000	T	.	1.538	11.1	-0.363	-0.127	1.020	10.191	1.538263	1.538263	NA	0.253488	0.617113	NA	0.5	NA	9.211812
731	19	4512629	4512629	C	T	exonic	PLIN4	NA	nonsynonymous SNV	PLIN4:NM_001080400:exon3:c.G1301A:p.R434K	exonic	ENSG00000167676	NA	nonsynonymous SNV	ENSG00000167676:ENST00000301286:exon3:c.G1301A:p.R434K	Score=329;Name=lod=29	NA	19p13.3	NA	NA	NA	NA	rs146679364	0.04	0.04	0.027	NA	NA	NA	NA	NA	NA	0.04	0.0017	0.02	0.09	0.0754	0.11	1	T	0.0	B	0.0	B	0.001	N	1.000	P	-2.89	N	4.08	T	-0.992	T	0.000	T	0.039	-1.774	0.01	3.7	0.687	0.761	8.494	-1.773753	NA	1	0.047499	0.112543	NA	0.058	NA	9.2104344
731	8	28304767	28304767	G	T	exonic	FBXO16	NA	nonsynonymous SNV	FBXO16:NM_001258211:exon6:c.C728A:p.T243N,FBXO16:NM_172366:exon7:c.C764A:p.T255N	exonic	ENSG00000214050	NA	nonsynonymous SNV	ENSG00000214050:ENST00000346498:exon6:c.C728A:p.T243N,ENSG00000214050:ENST00000518734:exon6:c.C728A:p.T243N,ENSG00000214050:ENST00000380254:exon7:c.C764A:p.T255N,ENSG00000214050:ENST00000521548:exon7:c.C764A:p.T255N	Score=397;Name=lod=55	NA	8p21.1	NA	NA	NA	NA	rs7016831	0.08	0.08	0.079	0.0926518	0.0358	NA	0.0274	0.2965	0.0174	0.04	0.0017	0.02	0.26	0.0512	0.26	0.25	T	0.002	B	0.006	B	0.253	N	0.000	P	1.245	L	2.49	T	-0.965	T	0.000	T	0.064	1.04	9.249	2.07	0.183	0.753	4.109	1.040345	NA	0.11	0.036628	0.210395	NA	NA	NA	9.2097054
731	1	207304900	207304900	T	C	exonic	C4BPA	NA	nonsynonymous SNV	C4BPA:NM_000715:exon8:c.T899C:p.I300T	exonic	ENSG00000123838	NA	nonsynonymous SNV	ENSG00000123838:ENST00000367070:exon8:c.T899C:p.I300T	NA	NA	1q32.2	NA	NA	NA	NA	rs4844573	0.47	0.47	0.478	0.489816	0.3767	0.2679	0.4625	0.8374	0.3845	0.37	0.33	0.43	0.82	0.4014	0.82	0.76	T	0.0	B	0.002	B	0.104	N	1.000	P	-0.975	N	0.02	T	-0.960	T	0.000	T	0.03	-0.866	0.513	-8.9	-2.717	-2.583	16.213	-0.865722	NA	NA	0.346512	0.75261	NA	0.543	NA	9.2087214
731	1	228526011	228526011	C	T	exonic	OBSCN	NA	synonymous SNV	OBSCN:NM_001098623:exon68:c.C17022T:p.A5674A,OBSCN:NM_052843:exon68:c.C17022T:p.A5674A,OBSCN:NM_001271223:exon79:c.C19893T:p.A6631A	exonic	ENSG00000154358	NA	synonymous SNV	ENSG00000154358:ENST00000284548:exon68:c.C17022T:p.A5674A,ENSG00000154358:ENST00000366709:exon68:c.C8379T:p.A2793A,ENSG00000154358:ENST00000422127:exon68:c.C17022T:p.A5674A,ENSG00000154358:ENST00000366707:exon74:c.C9924T:p.A3308A,ENSG00000154358:ENST00000570156:exon79:c.C19893T:p.A6631A	NA	NA	1q42.13	Score=917;Name=V$ZIC3_01	NA	NA	NA	rs11577699	0.12	0.12	0.107	0.117612	0.1372	0.1091	0.1916	0.1006	0.0767	0.14	0.09	0.2	0.08	0.1635	0.2	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-1.017	T	0.000	T	.	0.116	4.625	-2.15	-1.045	-0.668	5.259	0.116119	NA	NA	0.157779	0.138231	NA	0.101	NA	9.2081876
731	5	134678863	134678863	G	A	exonic	LOC100996485	NA	nonsynonymous SNV	LOC100996485:NM_001277348:exon6:c.G145A:p.A49T	exonic	ENSG00000224186	NA	nonsynonymous SNV	ENSG00000224186:ENST00000432382:exon6:c.G145A:p.A49T	NA	NA	5q31.1	NA	NA	NA	NA	rs868733	0.04	0.04	0.03	0.0327476	0.0706	NA	0.0418	0.0061	0.0573	0.07	NA	0.06	0.01	0.0558	0.076	0	D	.	.	.	.	.	.	1.000	N	.	.	.	.	-1.027	T	0.009	T	0.04	1.432	10.73	-2.13	-0.559	-0.295	4.270	1.432463	1.432463	NA	NA	NA	NA	0.051	NA	9.2069334
731	10	134748331	134748331	C	T	exonic	TTC40	NA	nonsynonymous SNV	TTC40:NM_001200049:exon8:c.G791A:p.S264N	exonic	ENSG00000171811	NA	nonsynonymous SNV	ENSG00000171811:ENST00000368582:exon8:c.G791A:p.S264N,ENSG00000171811:ENST00000368585:exon8:c.G791A:p.S264N,ENSG00000171811:ENST00000368586:exon8:c.G791A:p.S264N	NA	NA	10q26.3	NA	NA	NA	NA	rs12781609	0.37	0.37	0.357	0.373403	0.3459	0.3413	0.5014	0.323	0.4121	0.35	0.36	0.46	0.35	0.4018	0.46	0.48	T	0.0	B	0.001	B	0.014	N	1.000	P	-0.69	N	0.6	T	-1.010	T	0.000	T	0.041	0.005	4.04	-5.5	-1.228	-2.323	2.083	0.004943	NA	0.51	0.378837	0.356105	NA	0.355	NA	9.2067964
731	7	123269118	123269118	G	C	exonic	ASB15	NA	nonsynonymous SNV	ASB15:NM_080928:exon8:c.G1070C:p.G357A	exonic	ENSG00000146809	NA	nonsynonymous SNV	ENSG00000146809:ENST00000275699:exon8:c.G1070C:p.G357A,ENSG00000146809:ENST00000540573:exon8:c.G1070C:p.G357A,ENSG00000146809:ENST00000434204:exon9:c.G1070C:p.G357A,ENSG00000146809:ENST00000451215:exon10:c.G1070C:p.G357A,ENSG00000146809:ENST00000451558:exon12:c.G1070C:p.G357A	Score=369;Name=lod=42	NA	7q31.32	NA	NA	NA	NA	rs4731112	0.77	0.77	0.751	0.791733	0.7078	0.8284	0.7406	0.8215	0.8364	0.72	0.82	0.75	0.82	0.7411	0.82	1	T	0.0	B	0.0	B	0.000	N	0.975	P	-3.225	N	1.3	T	-0.903	T	0.000	T	0.235	0.991	9.046	6.17	1.643	5.778	17.866	0.990777	NA	1	0.678605	0.799818	NA	0.58	NA	9.2058284
731	15	75970070	75970070	C	T	exonic	CSPG4	NA	nonsynonymous SNV	CSPG4:NM_001897:exon9:c.G5108A:p.R1703H	exonic	ENSG00000173546	NA	nonsynonymous SNV	ENSG00000173546:ENST00000308508:exon9:c.G5108A:p.R1703H	Score=523;Name=lod=178	NA	15q24.2	NA	NA	NA	NA	rs8023621	0.26	0.26	0.216	0.262979	0.3787	0.1885	0.3919	0.1634	0.2638	0.38	0.14	0.36	0.15	0.3496	0.4	0.15	T	0.002	B	0.001	B	0.001	N	0.010	P	1.155	L	2.09	T	-0.923	T	0.000	T	0.195	2.718	15.05	3.09	0.521	1.492	5.585	2.717852	2.717852	0.07	0.399977	0.201866	NA	0.312	NA	9.2050564
732	9	79324439	79324439	A	G	exonic	PRUNE2	NA	synonymous SNV	PRUNE2:NM_015225:exon8:c.T2751C:p.D917D	exonic	ENSG00000106772	NA	synonymous SNV	ENSG00000106772:ENST00000376718:exon8:c.T2751C:p.D917D,ENSG00000106772:ENST00000428286:exon8:c.T1674C:p.D558D	Score=409;Name=lod=61	NA	9q21.2	Score=760;Name=V$STAT5A_02	NA	NA	NA	rs12238013	0.26	0.26	0.26	0.23742	0.1551	0.4643	0.1599	0.2103	0.18	0.15	0.5	0.14	0.22	0.1845	0.5	.	.	.	.	.	.	.	.	0.988	P	.	.	.	.	-0.910	T	0.000	T	.	-1.273	0.044	-2.73	-0.351	-0.311	3.959	-1.273443	NA	NA	0.123116	0.200255	NA	0.167	NA	9.2039506
732	2	54844790	54844790	C	T	exonic	SPTBN1	NA	synonymous SNV	SPTBN1:NM_178313:exon5:c.C573T:p.D191D,SPTBN1:NM_003128:exon6:c.C612T:p.D204D	exonic	ENSG00000115306	NA	synonymous SNV	ENSG00000115306:ENST00000333896:exon5:c.C573T:p.D191D,ENSG00000115306:ENST00000356805:exon6:c.C612T:p.D204D,ENSG00000115306:ENST00000389980:exon6:c.C612T:p.D204D	Score=654;Name=lod=605	NA	2p16.2	Score=880;Name=V$SPZ1_01	Name=FOXA1_(C-20),p300,FOXA2_(SC-6554),FOXA1_(SC-101058)	Name=7	NA	rs2229506	0.11	0.11	0.119	0.113419	0.167	0.0506	0.1052	0.1165	0.1247	0.15	0.06	0.11	0.11	0.143	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.327065	1.327065	NA	0.155116	0.120971	NA	0.094	NA	9.2015506
732	8	145058986	145058986	A	G	exonic	PARP10	NA	nonsynonymous SNV	PARP10:NM_032789:exon5:c.T1184C:p.L395P	exonic	ENSG00000178685	NA	nonsynonymous SNV	ENSG00000178685:ENST00000313059:exon4:c.T929C:p.L310P,ENSG00000178685:ENST00000525773:exon4:c.T1220C:p.L407P,ENSG00000178685:ENST00000313028:exon5:c.T1184C:p.L395P,ENSG00000178685:ENST00000524918:exon5:c.T1184C:p.L395P,ENSG00000178685:ENST00000527262:exon5:c.T1184C:p.L395P	NA	NA	8q24.3	NA	NA	NA	NA	rs11136343	0.35	0.35	0.351	0.364417	0.3926	0.124	0.255	0.5915	0.3538	0.38	0.13	0.28	0.6	0.3591	0.6	0.36	T	0.0	B	0.0	B	0.981	N	1.000	P	0.69	N	2.87	T	-0.938	T	0.000	T	0.398	0.455	6.469	-5.99	-1.692	-2.851	6.835	0.454757	NA	0.08	0.380349	0.570359	NA	0.449	NA	9.2012844
732	19	8808900	8808900	A	G	exonic	ACTL9	NA	nonsynonymous SNV	ACTL9:NM_178525:exon1:c.T152C:p.V51A	exonic	ENSG00000181786	NA	nonsynonymous SNV	ENSG00000181786:ENST00000324436:exon1:c.T152C:p.V51A	NA	NA	19p13.2	NA	NA	Name=7	NA	rs10410943	0.78	0.78	0.762	0.791733	0.7127	0.874	0.7219	0.7995	0.8272	0.71	0.86	0.73	0.81	0.7357	0.86	1	T	0.0	B	0.0	B	0.355	N	1.000	P	-1.645	N	-3.11	D	-0.957	T	0.000	T	0.068	-0.746	0.828	3.12	0.907	4.998	9.986	-0.746413	NA	1	0.68407	0.792329	NA	0.688	NA	9.2008634
732	2	88874891	88874891	C	A	exonic	EIF2AK3	NA	nonsynonymous SNV	EIF2AK3:NM_004836:exon13:c.G2110T:p.A704S	exonic	ENSG00000172071	NA	nonsynonymous SNV	ENSG00000172071:ENST00000415570:exon12:c.G1747T:p.A583S,ENSG00000172071:ENST00000303236:exon13:c.G2110T:p.A704S,ENSG00000172071:ENST00000419748:exon13:c.G1657T:p.A553S	Score=483;Name=lod=123	NA	2p11.2	NA	NA	NA	NA	rs1805165	0.71	0.71	0.745	0.720647	0.7018	0.5149	0.67	0.9834	0.6329	0.71	0.52	0.66	0.98	0.7021	0.98	1	T	0.003	B	0.003	B	0.000	N	1.000	P	-0.93	N	-0.3	T	-0.930	T	0.000	T	0.136	2.546	14.47	4.91	0.545	2.494	9.150	2.545891	2.545891	0.04	0.729884	0.941897	NA	0.804	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116968.2;CLNDSDB=.;CLNDSDBID=.	9.1995494
732	18	51820805	51820805	G	A	exonic	POLI	NA	nonsynonymous SNV	POLI:NM_007195:exon10:c.G2191A:p.A731T	exonic	ENSG00000101751	NA	nonsynonymous SNV	ENSG00000101751:ENST00000217800:exon9:c.G1813A:p.A605T,ENSG00000101751:ENST00000406285:exon9:c.G1954A:p.A652T,ENSG00000101751:ENST00000579434:exon9:c.G1882A:p.A628T,ENSG00000101751:ENST00000579534:exon10:c.G2191A:p.A731T	Score=374;Name=lod=44	NA	18q21.2	NA	Name=MafK_(ab50322),MafF_(M8194)	NA	NA	rs8305	0.77	0.77	0.778	0.789137	0.7078	0.7054	0.6455	0.9887	0.7914	0.71	0.72	0.68	0.98	0.7282	0.98	0.92	T	0.001	B	0.001	B	0.650	N	1.000	P	0.09	N	0.89	T	-0.992	T	0.000	T	0.044	1.41	10.65	-5.15	-1.312	-0.656	10.626	1.410335	1.410335	0.8	0.69893	0.932365	NA	0.804	NA	9.1984034
732	8	28304769	28304769	C	T	exonic	FBXO16	NA	nonsynonymous SNV	FBXO16:NM_001258211:exon6:c.G726A:p.M242I,FBXO16:NM_172366:exon7:c.G762A:p.M254I	exonic	ENSG00000214050	NA	nonsynonymous SNV	ENSG00000214050:ENST00000346498:exon6:c.G726A:p.M242I,ENSG00000214050:ENST00000518734:exon6:c.G726A:p.M242I,ENSG00000214050:ENST00000380254:exon7:c.G762A:p.M254I,ENSG00000214050:ENST00000521548:exon7:c.G762A:p.M254I	Score=397;Name=lod=55	NA	8p21.1	NA	NA	NA	NA	rs1390963	0.46	0.46	0.452	0.474641	0.3618	0.5506	0.4207	0.5976	0.3845	0.36	0.55	0.4	0.54	0.4065	0.55	0.38	T	0.002	B	0.005	B	0.755	U	0.000	P	1.87	L	2.55	T	-0.937	T	0.000	T	0.118	1.927	12.4	5.01	2.489	0.294	14.175	1.927336	1.927336	0.35	0.367209	0.538584	NA	0.384	NA	9.1978244
732	15	79054900	79054900	C	G	exonic	ADAMTS7	NA	nonsynonymous SNV	ADAMTS7:NM_014272:exon23:c.G4748C:p.G1583A	exonic	ENSG00000136378	NA	nonsynonymous SNV	ENSG00000136378:ENST00000388820:exon23:c.G4748C:p.G1583A	Score=470;Name=lod=108	NA	15q25.1	Score=802;Name=V$OLF1_01	NA	NA	NA	rs7495616	0.69	0.69	0.669	0.666534	0.7515	0.5913	0.6671	0.7156	0.59	0.73	0.6	0.66	0.74	0.6628	0.75	1	T	0.001	B	0.002	B	0.000	N	0.984	P	-2.095	N	0.31	T	-0.926	T	0.000	T	0.076	-0.175	3.147	4.59	0.917	3.474	13.544	-0.174983	NA	1	0.722689	0.746463	NA	0.812	NA	9.1963444
732	17	39643646	39643646	G	A	exonic	KRT36	NA	nonsynonymous SNV	KRT36:NM_003771:exon5:c.C944T:p.T315M	exonic	ENSG00000126337	NA	nonsynonymous SNV	ENSG00000126337:ENST00000328119:exon5:c.C944T:p.T315M,ENSG00000126337:ENST00000393986:exon6:c.C794T:p.T265M	NA	NA	17q21.2	NA	NA	NA	NA	rs2301354	0.45	0.45	0.428	0.484425	0.5398	0.3323	0.5447	0.4024	0.6524	0.54	0.3	0.61	0.39	0.5506	0.61	0.01	D	0.818	P	0.36	B	0.041	N	0.999	P	2.575	M	-2.5	D	-0.929	T	0.000	T	0.078	2.437	14.11	1.13	0.389	-0.279	17.877	2.436719	2.436719	0.01	0.546744	0.413981	NA	0.514	NA	9.1961894
732	17	73565171	73565171	T	C	exonic	LLGL2	NA	nonsynonymous SNV	LLGL2:NM_001031803:exon13:c.T1435C:p.F479L,LLGL2:NM_004524:exon13:c.T1435C:p.F479L	exonic	ENSG00000073350	NA	nonsynonymous SNV	ENSG00000073350:ENST00000167462:exon13:c.T1435C:p.F479L,ENSG00000073350:ENST00000392550:exon13:c.T1435C:p.F479L,ENSG00000073350:ENST00000577200:exon13:c.T1435C:p.F479L	Score=393;Name=lod=53	NA	17q25.1	NA	NA	NA	NA	rs1671021	0.45	0.45	0.451	0.464856	0.3738	0.2639	0.3372	0.907	0.2587	0.38	0.22	0.35	0.9	0.3773	0.9	0.47	T	0.0	B	0.0	B	0.000	N	0.000	P	-0.92	N	2.97	T	-1.019	T	0.000	T	0.101	1.409	10.65	4.33	0.637	2.038	2.731	1.409361	1.409361	0.69	0.386047	0.823877	NA	0.5	NA	9.1961864
732	15	54307925	54307925	C	T	exonic	UNC13C	NA	nonsynonymous SNV	UNC13C:NM_001080534:exon1:c.C2825T:p.S942L	exonic	ENSG00000137766	NA	nonsynonymous SNV	ENSG00000137766:ENST00000260323:exon1:c.C2825T:p.S942L,ENSG00000137766:ENST00000537900:exon1:c.C2825T:p.S942L,ENSG00000137766:ENST00000545554:exon1:c.C2825T:p.S942L	NA	NA	15q21.3	Score=784;Name=V$TCF11MAFG_01	NA	NA	NA	rs17731958	0.08	0.08	0.077	0.0678914	0.0378	0.1607	0.134	0.0008	0.047	0.04	0.17	0.12	0.002	0.0631	0.17	0.22	T	0.0	B	0.0	B	.	.	1.000	P	0.345	N	-1.19	T	-1.083	T	0.001	T	0.06	0.444	6.412	2.56	0.684	0.071	9.974	0.444147	NA	0.02	0.036541	0.013986	NA	0.043	NA	9.1958924
732	6	96054262	96054262	G	A	exonic	MANEA	NA	nonsynonymous SNV	MANEA:NM_024641:exon5:c.G1370A:p.R457H	exonic	ENSG00000172469	NA	nonsynonymous SNV	ENSG00000172469:ENST00000358812:exon5:c.G1370A:p.R457H	NA	NA	6q16.1	NA	NA	NA	NA	rs75510775	0.04	0.04	0.039	0.0341454	0.0517	NA	0.0375	0.0643	0.0082	0.04	NA	0.04	0.06	0.0382	0.064	0.27	T	0.0	B	0.0	B	0.208	N	1.000	N	0	N	.	.	-0.978	T	0.015	T	0.014	-1.122	0.124	4.19	0.475	1.056	5.615	-1.122266	NA	0.76	0.047686	0.064004	NA	0.036	NA	9.1957474
732	1	24671418	24671418	A	G	exonic	GRHL3	NA	nonsynonymous SNV	GRHL3:NM_001195010:exon12:c.A1313G:p.N438S,GRHL3:NM_021180:exon12:c.A1466G:p.N489S,GRHL3:NM_198173:exon12:c.A1451G:p.N484S,GRHL3:NM_198174:exon12:c.A1451G:p.N484S	exonic	ENSG00000158055	NA	nonsynonymous SNV	ENSG00000158055:ENST00000236255:exon12:c.A1466G:p.N489S,ENSG00000158055:ENST00000342072:exon12:c.A1172G:p.N391S,ENSG00000158055:ENST00000350501:exon12:c.A1451G:p.N484S,ENSG00000158055:ENST00000356046:exon12:c.A1313G:p.N438S,ENSG00000158055:ENST00000361548:exon12:c.A1451G:p.N484S	Score=412;Name=lod=63	NA	1p36.11	NA	NA	NA	NA	rs116396279	0.02	0.02	0.022	0.0181709	0.0596	NA	0.0231	0.0015	0.0133	0.06	NA	0.03	0.002	0.0325	0.06	0.84	T	0.001	B	0.002	B	0.436	N	0.714	D	-0.695	N	3.03	T	-0.902	T	0.001	T	0.039	0.596	7.212	-0.14	-0.113	0.882	8.000	0.595687	NA	0.5	0.046047	0.009079	NA	NA	NA	9.1951864
733	22	43089849	43089849	T	C	exonic	A4GALT	NA	nonsynonymous SNV	A4GALT:NM_017436:exon3:c.A109G:p.M37V	exonic	ENSG00000128274	NA	nonsynonymous SNV	ENSG00000128274:ENST00000249005:exon2:c.A109G:p.M37V,ENSG00000128274:ENST00000381278:exon2:c.A109G:p.M37V,ENSG00000128274:ENST00000401850:exon2:c.A109G:p.M37V	NA	NA	22q13.2	NA	NA	NA	NA	rs11541159	0.34	0.34	0.316	0.350639	0.3827	0.1319	0.3415	0.5083	0.3364	0.37	0.13	0.4	0.48	0.3867	0.48	0.94	T	0.0	B	0.0	B	0.314	U	1.000	P	0	N	-1.33	T	-1.048	T	0.000	T	0.048	1.205	9.896	-4.6	-1.433	-1.483	3.711	1.20549	NA	0.42	0.370202	0.471163	NA	0.37	NA	9.1937314
733	22	26388337	26388337	C	T	exonic	MYO18B	NA	synonymous SNV	MYO18B:NM_032608:exon40:c.C6165T:p.Y2055Y	exonic	ENSG00000133454	NA	synonymous SNV	ENSG00000133454:ENST00000335473:exon40:c.C6165T:p.Y2055Y,ENSG00000133454:ENST00000407587:exon40:c.C6168T:p.Y2056Y,ENSG00000133454:ENST00000536101:exon40:c.C6165T:p.Y2055Y	Score=481;Name=lod=120	NA	22q12.1	NA	NA	NA	NA	rs916425	0.12	0.12	0.127	0.114018	0.1759	0.001	0.1066	0.1997	0.0562	0.18	0.0017	0.12	0.19	0.1358	0.19	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.051	T	0.000	T	.	-0.595	1.337	-6.94	-1.610	-0.838	11.147	-0.595152	NA	NA	0.161264	0.185364	NA	0.283	NA	9.1937026
733	15	51350287	51350287	T	G	exonic	TNFAIP8L3	NA	nonsynonymous SNV	TNFAIP8L3:NM_207381:exon3:c.A670C:p.N224H	exonic	ENSG00000183578	NA	nonsynonymous SNV	ENSG00000183578:ENST00000327536:exon3:c.A670C:p.N224H	Score=401;Name=lod=57	NA	15q21.2	NA	NA	NA	NA	rs78897873	0.02	0.02	0.028	0.0157748	0.0547	NA	0.0216	0.0015	0.0072	0.05	NA	0.03	0.002	0.0345	0.051	0.09	T	0.152	B	0.025	B	0.031	N	1.000	N	0.55	N	1.53	T	-1.059	T	0.007	T	0.025	2.933	15.77	-1.38	0.048	2.126	6.164	2.932509	2.932509	0.08	0.050547	0.009335	NA	0.014	NA	9.1935864
733	9	90500627	90500627	G	A	exonic	SPATA31E1	NA	nonsynonymous SNV	SPATA31E1:NM_178828:exon4:c.G1225A:p.V409M	exonic	ENSG00000177992	NA	nonsynonymous SNV	ENSG00000177992:ENST00000325643:exon4:c.G1225A:p.V409M	NA	NA	9q22.1	NA	NA	NA	NA	rs34946554	0.08	0.08	0.088	0.0780751	0.0497	NA	0.0375	0.2337	0.0061	0.05	NA	0.04	0.23	0.0465	0.23	0.13	T	0.072	B	0.009	B	0.004	N	1.000	P	0	N	3.96	T	-0.940	T	0.000	T	0.02	-0.895	0.448	-4.31	-2.871	-0.326	2.385	-0.895324	NA	0.59	0.044196	0.182478	NA	0.094	NA	9.1929374
733	6	52617738	52617738	G	A	exonic	GSTA2	NA	nonsynonymous SNV	GSTA2:NM_000846:exon5:c.C328T:p.P110S	exonic	ENSG00000244067	NA	nonsynonymous SNV	ENSG00000244067:ENST00000493422:exon5:c.C328T:p.P110S	NA	NA	6p12.2	NA	NA	NA	NA	rs2234951	0.06	0.06	0.045	0.0706869	0.0527	0.13	0.0216	0.0015	0.1564	0.06	0.13	0.02	0.0041	0.0569	0.13	0.12	T	0.005	B	0.012	B	0.000	D	1.000	P	2.625	M	4.5	T	-1.023	T	0.005	T	0.075	1.232	9.997	1.34	0.498	0.375	8.105	1.232425	NA	NA	0.034651	0.007717	NA	0.029	NA	9.1890824
733	2	202430584	202430584	G	A	exonic	ALS2CR11	NA	nonsynonymous SNV	ALS2CR11:NM_001168216:exon9:c.C845T:p.T282I,ALS2CR11:NM_001168217:exon9:c.C845T:p.T282I,ALS2CR11:NM_001168221:exon9:c.C845T:p.T282I,ALS2CR11:NM_152525:exon9:c.C845T:p.T282I	exonic	ENSG00000155754	NA	nonsynonymous SNV	ENSG00000155754:ENST00000286195:exon9:c.C845T:p.T282I,ENSG00000155754:ENST00000439140:exon9:c.C845T:p.T282I,ENSG00000155754:ENST00000439802:exon9:c.C845T:p.T282I,ENSG00000155754:ENST00000450242:exon9:c.C845T:p.T282I	NA	NA	2q33.1	Score=869;Name=V$OCT1_03	NA	NA	NA	rs73991652	0.04	0.04	0.035	0.04373	0.0477	NA	0.0476	0.0991	0.0072	0.05	NA	0.04	0.07	0.043	0.078	0.21	T	0.213	B	0.061	B	0.040	N	1.000	N	0.77	N	0.94	T	-1.053	T	0.005	T	0.054	-1.321	0.033	-3.54	-0.455	-0.378	11.585	-1.32089	NA	0.07	0.053837	0.077621	NA	0.036	NA	9.1887964
733	9	99581916	99581916	C	G	exonic	ZNF782	NA	nonsynonymous SNV	ZNF782:NM_001001662:exon6:c.G389C:p.R130P	exonic	ENSG00000196597	NA	nonsynonymous SNV	ENSG00000196597:ENST00000478850:exon5:c.G389C:p.R130P,ENSG00000196597:ENST00000481138:exon6:c.G389C:p.R130P	NA	NA	9q22.33	NA	Name=SETDB1	NA	NA	rs7870376	0.21	0.21	0.244	0.21865	0.0318	0.3185	0.0562	0.4327	0.1339	0.03	0.34	0.06	0.44	0.0927	0.44	1	T	0.0	B	0.0	B	0.319	N	0.863	P	-1.08	N	5.83	T	-0.939	T	0.000	T	0.405	-1.539	0.016	2.47	0.440	0.814	2.280	-1.539349	NA	NA	0.020116	0.376759	ID=COSM150639;OCCURENCE=1(stomach)	0.152	NA	9.1887174
733	10	94695617	94695617	C	T	exonic	EXOC6	NA	nonsynonymous SNV	EXOC6:NM_001013848:exon12:c.C1172T:p.T391I,EXOC6:NM_019053:exon12:c.C1187T:p.T396I	exonic	ENSG00000138190	NA	nonsynonymous SNV	ENSG00000138190:ENST00000495132:exon4:c.C218T:p.T73I,ENSG00000138190:ENST00000260762:exon12:c.C1187T:p.T396I,ENSG00000138190:ENST00000371552:exon12:c.C1172T:p.T391I,ENSG00000138190:ENST00000371547:exon13:c.C1235T:p.T412I	Score=634;Name=lod=502	NA	10q23.33	NA	NA	NA	NA	rs1326331	0.86	0.86	0.863	0.888578	0.6839	0.996	0.8473	0.9924	0.8773	0.68	1	0.82	0.99	0.7725	1	1	T	0.0	B	0.0	B	0.000	N	0.000	P	-1.81	N	2.44	T	-0.955	T	0.000	T	0.233	0.598	7.226	5.75	1.011	6.285	11.866	0.598293	NA	1	0.688953	0.935996	NA	0.855	NA	9.1879804
733	22	50943232	50943232	G	A	exonic	LMF2	NA	nonsynonymous SNV	LMF2:NM_033200:exon10:c.C1436T:p.T479M	exonic	ENSG00000100258	NA	nonsynonymous SNV	ENSG00000100258:ENST00000216080:exon10:c.C1361T:p.T454M,ENSG00000100258:ENST00000474879:exon10:c.C1436T:p.T479M	Score=397;Name=lod=55	NA	22q13.33	NA	NA	NA	NA	rs8136495	0.16	0.16	0.16	0.141973	0.2316	0.0387	0.1398	0.1626	0.1299	0.23	0.03	0.16	0.18	0.1853	0.23	0.07	T	0.699	P	0.225	B	0.002	N	0.000	P	1.825	L	1.89	T	-1.031	T	0.000	T	0.415	1.89	12.28	1.58	0.120	2.881	5.913	1.889841	1.889841	0.04	0.228865	0.158904	NA	0.094	NA	9.1875684
733	10	123846490	123846490	C	T	exonic	TACC2	NA	nonsynonymous SNV	TACC2:NM_206862:exon4:c.C4475T:p.P1492L	exonic	ENSG00000138162	NA	nonsynonymous SNV	ENSG00000138162:ENST00000334433:exon3:c.C4475T:p.P1492L,ENSG00000138162:ENST00000453444:exon3:c.C4475T:p.P1492L,ENSG00000138162:ENST00000369005:exon4:c.C4475T:p.P1492L,ENSG00000138162:ENST00000515273:exon4:c.C4475T:p.P1492L,ENSG00000138162:ENST00000515603:exon4:c.C4475T:p.P1492L	NA	NA	10q26.13	NA	NA	NA	NA	rs7920896	0.07	0.07	0.062	0.0814696	0.0437	0.0536	0.1427	0.1082	0.0695	0.05	0.06	0.09	0.11	0.0653	0.11	0.01	D	0.005	B	0.007	B	0.799	N	1.000	N	0.975	L	3.71	T	-0.944	T	0.000	T	0.071	2.774	15.24	2.3	0.576	0.715	5.930	2.773624	2.773624	0	0.038023	0.083296	NA	0.087	NA	9.1863104
733	12	104408794	104408794	C	T	exonic	GLT8D2	NA	nonsynonymous SNV	GLT8D2:NM_031302:exon4:c.G109A:p.A37T	exonic	ENSG00000120820	NA	nonsynonymous SNV	ENSG00000120820:ENST00000546436:exon3:c.G109A:p.A37T,ENSG00000120820:ENST00000360814:exon4:c.G109A:p.A37T,ENSG00000120820:ENST00000547583:exon4:c.G109A:p.A37T,ENSG00000120820:ENST00000548660:exon4:c.G109A:p.A37T	NA	NA	12q23.3	NA	NA	NA	NA	rs17035120	0.13	0.13	0.103	0.140974	0.0328	0.3512	0.0951	0.0756	0.1564	0.04	0.32	0.1	0.09	0.0852	0.32	0.7	T	0.001	B	0.0	B	0.221	N	0.997	P	0.345	N	1.52	T	-0.962	T	0.000	T	0.022	-0.006	3.984	-2.09	-0.216	-1.103	5.266	-0.005865	NA	0.46	0.029535	0.072628	NA	0.116	NA	9.1857984
734	1	19565344	19565344	C	G	exonic	EMC1	NA	nonsynonymous SNV	EMC1:NM_001271429:exon9:c.G968C:p.S323T,EMC1:NM_001271427:exon10:c.G1031C:p.S344T,EMC1:NM_001271428:exon10:c.G1034C:p.S345T,EMC1:NM_015047:exon10:c.G1034C:p.S345T	exonic	ENSG00000127463	NA	nonsynonymous SNV	ENSG00000127463:ENST00000375208:exon9:c.G968C:p.S323T,ENSG00000127463:ENST00000375199:exon10:c.G1031C:p.S344T,ENSG00000127463:ENST00000477853:exon10:c.G1034C:p.S345T	NA	NA	1p36.13	NA	NA	NA	NA	rs709683	0.56	0.56	0.565	0.572284	0.3469	0.7401	0.5101	0.7315	0.4601	0.35	0.75	0.46	0.73	0.4418	0.75	0.62	T	0.0	B	0.0	B	0.282	N	1.000	P	0	N	1.98	T	-1.041	T	0.000	T	0.029	0.69	7.688	5.22	1.643	2.667	16.283	0.690412	NA	0.2	0.359884	0.683613	NA	0.565	NA	9.1847494
734	1	206225011	206225011	G	C	exonic	AVPR1B	NA	nonsynonymous SNV	AVPR1B:NM_000707:exon1:c.G571C:p.G191R	exonic	ENSG00000198049	NA	nonsynonymous SNV	ENSG00000198049:ENST00000367126:exon1:c.G571C:p.G191R	Score=492;Name=lod=133	NA	1q32.1	NA	NA	NA	NA	rs33990840	0.05	0.05	0.048	0.0593051	0.0507	0.006	0.0403	0.1256	0.047	0.05	0.01	0.05	0.12	0.0525	0.12	0.62	T	0.0	B	0.004	B	0.121	N	1.000	P	-0.11	N	1.22	T	-1.029	T	0.001	T	0.045	1.323	10.34	4.98	0.823	0.194	4.131	1.323494	1.323494	0.35	0.046693	0.091095	NA	0.116	NA	9.1834404
734	2	163128824	163128824	T	C	exonic	IFIH1	NA	nonsynonymous SNV	IFIH1:NM_022168:exon13:c.A2528G:p.H843R	exonic	ENSG00000115267	NA	nonsynonymous SNV	ENSG00000115267:ENST00000263642:exon13:c.A2528G:p.H843R	Score=557;Name=lod=245	NA	2q24.2	NA	NA	NA	NA	rs3747517	0.61	0.61	0.569	0.589856	0.7505	0.3135	0.7666	0.5764	0.6022	0.74	0.34	0.76	0.6	0.6762	0.76	1	T	0.0	B	0.0	B	0.000	N	0.000	P	-3.105	N	3.83	T	-0.966	T	0.000	T	0.124	0.726	7.862	5.76	1.449	4.684	15.098	0.726267	NA	1	0.726047	0.624376	NA	0.659	NA	9.1805864
734	14	24839083	24839083	G	C	exonic	NFATC4	NA	nonsynonymous SNV	NFATC4:NM_001198965:exon2:c.G479C:p.G160A,NFATC4:NM_001198966:exon2:c.G269C:p.G90A,NFATC4:NM_004554:exon2:c.G479C:p.G160A,NFATC4:NM_001136022:exon3:c.G668C:p.G223A,NFATC4:NM_001198967:exon3:c.G668C:p.G223A	exonic	ENSG00000100968	NA	nonsynonymous SNV	ENSG00000100968:ENST00000554344:exon1:c.G269C:p.G90A,ENSG00000100968:ENST00000554661:exon1:c.G269C:p.G90A,ENSG00000100968:ENST00000557451:exon1:c.G269C:p.G90A,ENSG00000100968:ENST00000250373:exon2:c.G479C:p.G160A,ENSG00000100968:ENST00000422617:exon2:c.G443C:p.G148A,ENSG00000100968:ENST00000553708:exon2:c.G479C:p.G160A,ENSG00000100968:ENST00000553879:exon2:c.G269C:p.G90A,ENSG00000100968:ENST00000554050:exon2:c.G479C:p.G160A,ENSG00000100968:ENST00000555453:exon2:c.G443C:p.G148A,ENSG00000100968:ENST00000556169:exon2:c.G443C:p.G148A,ENSG00000100968:ENST00000557674:exon2:c.G410C:p.G137A,ENSG00000100968:ENST00000413692:exon3:c.G668C:p.G223A,ENSG00000100968:ENST00000424781:exon3:c.G518C:p.G173A,ENSG00000100968:ENST00000539237:exon3:c.G575C:p.G192A,ENSG00000100968:ENST00000553469:exon3:c.G575C:p.G192A,ENSG00000100968:ENST00000554591:exon3:c.G668C:p.G223A,ENSG00000100968:ENST00000554966:exon3:c.G518C:p.G173A,ENSG00000100968:ENST00000555590:exon3:c.G518C:p.G173A,ENSG00000100968:ENST00000556279:exon3:c.G575C:p.G192A	Score=500;Name=lod=143	NA	14q12	NA	NA	NA	NA	rs2229309	0.32	0.32	0.303	0.280351	0.5716	0.1448	0.379	0.084	0.316	0.56	0.16	0.41	0.08	0.4953	0.59	1	T	0.969	D	0.588	P	0.684	N	0.000	P	0.69	N	2.49	T	-1.054	T	0.000	T	0.236	0.861	8.484	1.81	0.220	2.027	11.077	0.860535	NA	0.21	0.585971	0.165563	NA	0.471	NA	9.1804624
734	19	9003645	9003645	G	A	exonic	MUC16	NA	nonsynonymous SNV	MUC16:NM_024690:exon49:c.C39995T:p.T13332I	exonic	ENSG00000181143	NA	nonsynonymous SNV	ENSG00000181143:ENST00000397910:exon49:c.C39995T:p.T13332I	NA	NA	19p13.2	Score=806;Name=V$HNF1_01	NA	NA	NA	rs11085777	0.31	0.31	0.277	0.252196	0.4135	0.2698	0.3617	0.0787	0.2249	0.4	0.31	0.39	0.1	0.3454	0.4	0	D	0.325	B	0.219	B	.	.	.	.	1.845	L	0.72	T	-0.958	T	0.000	T	0.094	1.698	11.64	-2.8	-0.543	-0.040	3.132	1.697732	1.697732	0.19	0.39458	0.13051	NA	0.261	NA	9.1798534
734	12	71523134	71523134	A	C	exonic	TSPAN8	NA	nonsynonymous SNV	TSPAN8:NM_004616:exon8:c.T637G:p.S213A	exonic	ENSG00000127324	NA	nonsynonymous SNV	ENSG00000127324:ENST00000552128:exon5:c.T388G:p.S130A,ENSG00000127324:ENST00000546561:exon7:c.T637G:p.S213A,ENSG00000127324:ENST00000247829:exon8:c.T637G:p.S213A,ENSG00000127324:ENST00000393330:exon11:c.T637G:p.S213A	Score=393;Name=lod=53	NA	12q21.1	NA	NA	NA	NA	rs1051334	0.29	0.29	0.3	0.250799	0.3986	0.2877	0.2291	0.1203	0.2526	0.39	0.31	0.26	0.11	0.3449	0.41	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-2.935	N	-1.04	T	-0.957	T	0.000	T	0.059	0.001	4.019	4.88	0.895	1.278	12.030	0.001031	NA	1	0.410191	0.189349	NA	0.261	NA	9.1796424
734	6	24588884	24588884	C	T	exonic	KIAA0319	NA	nonsynonymous SNV	KIAA0319:NM_001168376:exon3:c.G796A:p.A266T,KIAA0319:NM_001168375:exon4:c.G931A:p.A311T,KIAA0319:NM_001168377:exon4:c.G931A:p.A311T,KIAA0319:NM_014809:exon4:c.G931A:p.A311T,KIAA0319:NM_001168374:exon5:c.G904A:p.A302T	exonic	ENSG00000137261	NA	nonsynonymous SNV	ENSG00000137261:ENST00000430948:exon3:c.G796A:p.A266T,ENSG00000137261:ENST00000378214:exon4:c.G931A:p.A311T,ENSG00000137261:ENST00000537886:exon4:c.G931A:p.A311T,ENSG00000137261:ENST00000543707:exon4:c.G931A:p.A311T,ENSG00000137261:ENST00000535378:exon5:c.G904A:p.A302T	NA	NA	6p22.3	NA	NA	NA	NA	rs4504469	0.23	0.23	0.223	0.205871	0.4225	0.1121	0.2248	0.0371	0.2945	0.44	0.12	0.22	0.04	0.3277	0.44	0.59	T	0.002	B	0.002	B	0.946	N	1.000	P	-1.43	N	3.29	T	-0.912	T	0.001	T	0.056	-0.144	3.297	-4.6	-1.160	-1.525	7.824	-0.14364	NA	1	0.403605	0.096005	NA	0.319	NA	9.1795284
734	10	61414176	61414176	G	A	exonic	SLC16A9	NA	nonsynonymous SNV	SLC16A9:NM_194298:exon5:c.C608T:p.A203V	exonic	ENSG00000165449	NA	nonsynonymous SNV	ENSG00000165449:ENST00000395347:exon5:c.C608T:p.A203V,ENSG00000165449:ENST00000395348:exon5:c.C608T:p.A203V	NA	NA	10q21.2	NA	NA	NA	NA	rs56370926	0.03	0.03	0.033	0.0317492	0.0616	NA	0.0173	0.0023	0.0838	0.06	NA	0.02	0.002	0.0414	0.06	0.27	T	0.201	B	0.087	B	0.172	N	1.000	N	0.625	N	-1.51	D	-1.038	T	0.043	T	0.015	-0.502	1.699	1.94	1.147	0.456	6.524	-0.502086	NA	0.26	0.053605	0.01044	NA	0.094	NA	9.1767284
734	17	34072031	34072031	G	A	exonic	GAS2L2	NA	nonsynonymous SNV	GAS2L2:NM_139285:exon6:c.C2485T:p.R829W	exonic	ENSG00000132139	NA	nonsynonymous SNV	ENSG00000132139:ENST00000254466:exon6:c.C2485T:p.R829W,ENSG00000132139:ENST00000587565:exon7:c.C2437T:p.R813W	NA	NA	17q12	NA	NA	NA	NA	rs56386706	0.03	0.03	0.025	0.0259585	0.0626	NA	0.0375	0.0045	0.0358	0.05	NA	0.03	0.01	0.0397	0.055	0.02	D	0.963	D	0.183	B	0.020	N	1.000	N	0	N	2.19	T	-1.048	T	0.004	T	0.067	1.548	11.13	0.351	0.131	0.218	4.358	1.547655	1.547655	0	0.054767	0.01271	NA	0.08	NA	9.1762664
734	2	71060111	71060111	G	A	exonic	CD207	NA	nonsynonymous SNV	CD207:NM_015717:exon4:c.C637T:p.P213S	exonic	ENSG00000116031	NA	nonsynonymous SNV	ENSG00000116031:ENST00000410009:exon4:c.C637T:p.P213S	NA	NA	2p13.3	NA	NA	NA	NA	rs17006436	0.03	0.03	0.02	0.0191693	0.0626	NA	0.0389	0.0008	0.0051	0.06	NA	0.04	NA	0.0362	0.06	0.64	T	0.0	B	0.001	B	0.065	N	1.000	N	0.195	N	2.23	T	-0.999	T	0.002	T	0.027	-1.68	0.012	-10.7	-4.351	-7.217	0.188	-1.679668	NA	0.28	0.059179	0.012701	NA	0.029	NA	9.1753544
734	7	129938598	129938598	G	T	exonic	CPA4	NA	nonsynonymous SNV	CPA4:NM_001163446:exon2:c.G81T:p.L27F,CPA4:NM_016352:exon2:c.G81T:p.L27F	exonic	ENSG00000128510	NA	nonsynonymous SNV	ENSG00000128510:ENST00000222482:exon2:c.G81T:p.L27F,ENSG00000128510:ENST00000445470:exon2:c.G81T:p.L27F,ENSG00000128510:ENST00000470542:exon2:c.G81T:p.L27F,ENSG00000128510:ENST00000473956:exon2:c.G81T:p.L27F,ENSG00000128510:ENST00000492072:exon2:c.G81T:p.L27F	Score=503;Name=lod=148	NA	7q32.2	Score=756;Name=V$STAT5A_02	NA	NA	NA	rs34587586	0.36	0.36	0.328	0.35603	0.3877	0.3581	0.3458	0.3253	0.3701	0.37	0.37	0.39	0.32	0.3688	0.4	0.63	T	0.008	B	0.219	B	0.001	N	0.000	P	0.58	N	2.47	T	-0.899	T	0.000	T	0.266	0.616	7.318	4.47	0.512	0.604	5.396	0.616383	NA	0.39	0.401512	0.337267	NA	0.457	NA	9.1753214
735	19	14862430	14862430	C	G	exonic	EMR2	NA	nonsynonymous SNV	EMR2:NM_001271052:exon14:c.G1668C:p.L556F,EMR2:NM_013447:exon16:c.G1842C:p.L614F	exonic	ENSG00000127507	NA	nonsynonymous SNV	ENSG00000127507:ENST00000595839:exon12:c.G1416C:p.L472F,ENSG00000127507:ENST00000353005:exon13:c.G1416C:p.L472F,ENSG00000127507:ENST00000594076:exon13:c.G1563C:p.L521F,ENSG00000127507:ENST00000353876:exon14:c.G1563C:p.L521F,ENSG00000127507:ENST00000392965:exon14:c.G1668C:p.L556F,ENSG00000127507:ENST00000594294:exon14:c.G1695C:p.L565F,ENSG00000127507:ENST00000346057:exon15:c.G1695C:p.L565F,ENSG00000127507:ENST00000596991:exon15:c.G1809C:p.L603F,ENSG00000127507:ENST00000601345:exon15:c.G1809C:p.L603F,ENSG00000127507:ENST00000315576:exon16:c.G1842C:p.L614F,ENSG00000127507:ENST00000392967:exon16:c.G1809C:p.L603F	Score=433;Name=lod=77	NA	19p13.12	NA	NA	NA	NA	rs2524383	0.77	0.77	0.773	0.816494	0.7207	0.8274	0.6571	0.9297	0.864	0.73	0.77	0.65	0.91	0.7371	0.91	1	T	0.0	B	0.0	B	.	.	0.000	P	-2.875	N	1.91	T	-0.992	T	0.000	T	0.609	-0.359	2.307	3.57	1.078	1.820	7.749	-0.358782	NA	1	0.702442	0.902633	NA	0.739	NA	9.1730914
735	2	152331418	152331418	C	G	exonic	RIF1	NA	nonsynonymous SNV	RIF1:NM_001177665:exon34:c.C7174G:p.L2392V,RIF1:NM_001177663:exon35:c.C7174G:p.L2392V,RIF1:NM_001177664:exon35:c.C7174G:p.L2392V,RIF1:NM_018151:exon36:c.C7252G:p.L2418V	exonic	ENSG00000080345	NA	nonsynonymous SNV	ENSG00000080345:ENST00000430328:exon34:c.C7174G:p.L2392V,ENSG00000080345:ENST00000243326:exon35:c.C7252G:p.L2418V,ENSG00000080345:ENST00000428287:exon35:c.C7174G:p.L2392V,ENSG00000080345:ENST00000453091:exon35:c.C7174G:p.L2392V,ENSG00000080345:ENST00000444746:exon36:c.C7252G:p.L2418V	NA	NA	2q23.3	NA	NA	Name=2	NA	rs1065177	0.72	0.72	0.709	0.656749	0.7256	0.7599	0.7378	0.5734	0.5348	0.71	0.79	0.75	0.63	0.707	0.79	1	T	0.001	B	0.003	B	0.134	N	1.000	P	0	N	2.88	T	-1.010	T	0.000	T	0.184	-1.899	0.008	-6.16	-1.793	-2.113	5.004	-1.898981	NA	1	0.728658	0.58965	NA	0.783	NA	9.1720754
735	11	27362257	27362257	T	C	exonic	CCDC34	NA	nonsynonymous SNV	CCDC34:NM_030771:exon5:c.A893G:p.N298S	exonic	ENSG00000109881	NA	nonsynonymous SNV	ENSG00000109881:ENST00000328697:exon5:c.A893G:p.N298S	Score=525;Name=lod=181	NA	11p14.1	NA	NA	NA	NA	rs80317617	0.03	0.03	0.022	0.0209665	0.0547	0.004	0.0389	0.0091	0.0072	0.06	NA	0.05	0.0041	0.0488	0.06	0.26	T	0.17	B	0.047	B	0.031	N	0.000	P	0.83	L	2.63	T	-1.020	T	0.003	T	0.039	2.629	14.75	3.19	0.337	0.704	8.162	2.629292	2.629292	0.51	0.058269	0.016576	NA	0.022	NA	9.1715644
735	19	42213744	42213744	T	C	exonic	CEACAM5	NA	synonymous SNV	CEACAM5:NM_004363:exon2:c.T210C:p.G70G	exonic	ENSG00000105388,ENSG00000267881	NA	synonymous SNV	ENSG00000105388:ENST00000221992:exon2:c.T210C:p.G70G,ENSG00000105388:ENST00000398599:exon2:c.T210C:p.G70G,ENSG00000105388:ENST00000405816:exon2:c.T210C:p.G70G,ENSG00000267881:ENST00000598976:exon2:c.T210C:p.G70G	NA	NA	19q13.2	NA	NA	NA	NA	rs10402825	0.13	0.13	0.124	0.137181	0.1958	NA	0.0922	0.3056	0.0225	0.18	NA	0.1	0.23	0.1394	0.3	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	.	.	.	.	.	1.549	11.13	-6.19	-2.845	-2.408	4.807	1.548573	1.548573	NA	0.161512	0.300045	NA	0.203	NA	9.1699546
735	1	183617105	183617105	A	G	exonic	APOBEC4	NA	nonsynonymous SNV	APOBEC4:NM_203454:exon2:c.T812C:p.F271S	exonic	ENSG00000173627	NA	nonsynonymous SNV	ENSG00000173627:ENST00000308641:exon2:c.T812C:p.F271S	NA	NA	1q25.3	NA	NA	Name=8	NA	rs1174658	0.36	0.36	0.346	0.370208	0.4006	0.244	0.3473	0.4932	0.319	0.4	0.19	0.39	0.48	0.368	0.48	0.38	T	0.0	B	0.0	B	0.035	N	1.000	P	-1.87	N	2.91	T	-0.969	T	0.000	T	0.033	-1.373	0.026	4.55	0.918	1.385	8.190	-1.372911	NA	NA	0.395465	0.46936	ID=COSM424777;OCCURENCE=1(breast)	0.42	NA	9.1692684
735	6	150067675	150067675	A	G	UTR5	NUP43	NM_198887:c.-44T>C	NA	NA	exonic	ENSG00000120253	NA	nonsynonymous SNV	ENSG00000120253:ENST00000367403:exon1:c.T140C:p.V47A	Score=265;Name=lod=16	NA	6q25.1	NA	Name=NF-YB,HNF4G_(SC-6558),CTCF_(C-20),ZBTB7A_(SC-34508),GR,c-Myc,ELF1_(SC-631),FOXA1_(SC-101058),FOXA2_(SC-6554),HEY1,ZEB1_(SC-25388),NFKB,TBP,IRF1,GTF2F1_(RAP-74),CHD2_(N-1250),CTCF,p300,E2F4,FOXA1_(C-20),GABP,ZBTB33,TAF1,Pol2(b),FOSL2,ETS1,E2F6_(H-50),NF-YA,YY1_(C-20),HA-E2F1,Sin3Ak-20,BCLAF1_(M33-P5B11),KAP1,ZNF263,eGFP-JunD,E2F6,c-Fos,Pol2-4H8,Pol2,RFX5_(N-494),NRSF,SP1,Pol2(phosphoS2),YY1,Egr-1	Name=148	NA	rs10872646	0.56	0.56	0.506	0.542133	0.3579	0.8234	0.6369	0.5386	0.3793	0.35	0.8	0.6	0.57	0.4451	0.8	0.19	T	.	.	.	.	0.215	N	0.000	P	.	.	.	.	-1.066	T	0.064	T	0.116	-0.132	3.355	2.84	0.288	0.393	6.104	-0.131675	NA	0.2	0.363023	0.498638	NA	0.58	NA	9.1673104
735	17	78079597	78079597	A	G	exonic	GAA	NA	nonsynonymous SNV	GAA:NM_000152:exon3:c.A596G:p.H199R,GAA:NM_001079804:exon3:c.A596G:p.H199R,GAA:NM_001079803:exon4:c.A596G:p.H199R	exonic	ENSG00000171298	NA	nonsynonymous SNV	ENSG00000171298:ENST00000302262:exon3:c.A596G:p.H199R,ENSG00000171298:ENST00000570803:exon3:c.A596G:p.H199R,ENSG00000171298:ENST00000390015:exon4:c.A596G:p.H199R,ENSG00000171298:ENST00000577106:exon4:c.A596G:p.H199R	NA	NA	17q25.3	NA	NA	Name=43	NA	rs1042393	0.62	0.62	0.572	0.600839	0.7535	0.5437	0.5418	0.5212	0.6524	0.75	0.57	0.55	0.51	0.6746	0.75	0.71	T	0.0	B	0.0	B	0.263	N	1.000	P	-2.92	N	-1.81	D	-0.892	T	0.000	T	0.174	-1.608	0.013	-2.36	-0.605	-0.217	12.466	-1.607992	NA	0.49	0.738256	0.544258	NA	0.645	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000078183.2;CLNDSDB=.;CLNDSDBID=.	9.1669774
735	20	44184375	44184375	T	C	exonic	WFDC8	NA	nonsynonymous SNV	WFDC8:NM_130896:exon4:c.A410G:p.N137S,WFDC8:NM_181510:exon4:c.A410G:p.N137S	exonic	ENSG00000158901	NA	nonsynonymous SNV	ENSG00000158901:ENST00000289953:exon4:c.A410G:p.N137S,ENSG00000158901:ENST00000357199:exon4:c.A410G:p.N137S	NA	NA	20q13.12	NA	NA	NA	NA	rs2250860	0.29	0.29	0.29	0.283347	0.4016	0.0585	0.3444	0.3707	0.2321	0.4	0.05	0.36	0.35	0.3499	0.41	1	T	0.001	B	0.001	B	0.632	N	1.000	P	-1.565	N	0.71	T	-1.024	T	0.000	T	0.006	-1.215	0.065	-4.39	-1.210	-1.703	6.978	-1.21545	NA	1	0.414884	0.374489	NA	0.413	NA	9.1669494
736	2	48018081	48018081	A	G	exonic	MSH6	NA	synonymous SNV	MSH6:NM_000179:exon2:c.A276G:p.P92P	exonic	ENSG00000116062	NA	synonymous SNV	ENSG00000116062:ENST00000234420:exon2:c.A276G:p.P92P,ENSG00000116062:ENST00000445503:exon2:c.A276G:p.P92P	Score=642;Name=lod=540	NA	2p16.3	Score=799;Name=V$OLF1_01	NA	Name=10	NA	rs1800932	0.1	0.1	0.09	0.0866613	0.1789	NA	0.121	0.084	0.0603	0.18	NA	0.14	0.08	0.1349	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.240136	1.240136	NA	0.190233	0.116432	NA	0.145	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=Lynch_syndrome|not_specified;CLNREVSTAT=exp|mult;CLNACC=RCV000030265.2|RCV000035321.2;CLNDSDB=GeneReviews:MedGen:SNOMED_CT|.;CLNDSDBID=NBK1211:C0009405:315058005|.	9.1626336
736	21	37444696	37444696	C	T	ncRNA_intronic	LOC100133286	NA	NA	NA	exonic	ENSG00000159228	NA	nonsynonymous SNV	ENSG00000159228:ENST00000399191:exon3:c.C622T:p.R208W	NA	NA	21q22.12	NA	NA	NA	NA	rs2835265	0.13	0.13	0.12	0.126398	0.0875	0.2133	0.1772	0.0076	0.2014	0.1	0.25	0.16	0.02	0.1362	0.25	0	D	.	.	.	.	.	.	1.000	P	.	.	-1.02	T	-1.012	T	0.000	T	0.043	-0.277	2.674	-6.03	-1.807	0.635	1.206	-0.276955	NA	NA	0.117326	0.024739	NA	0.072	NA	9.158974
736	1	201184878	201184878	C	A	exonic	IGFN1	NA	nonsynonymous SNV	IGFN1:NM_001164586:exon15:c.C9207A:p.S3069R	exonic	ENSG00000163395	NA	nonsynonymous SNV	ENSG00000163395:ENST00000295591:exon15:c.C687A:p.S229R,ENSG00000163395:ENST00000335211:exon15:c.C9207A:p.S3069R	NA	NA	1q32.1	NA	NA	NA	NA	rs61743921	0.03	0.03	0.028	0.0219649	0.0517	NA	0.0447	0.0076	0.0174	0.05	NA	0.05	0.02	0.0544	0.069	.	.	0.724	P	0.686	P	0.006	N	0.755	N	1.9	L	0.95	T	-1.063	T	0.016	T	0.497	2.309	13.68	-0.489	-0.108	-1.017	10.630	2.308775	2.308775	0.03	0.068488	0.019065	NA	0.014	NA	9.1587454
736	1	1266738	1266738	G	A	exonic	TAS1R3	NA	nonsynonymous SNV	TAS1R3:NM_152228:exon1:c.G13A:p.A5T	exonic	ENSG00000169962	NA	nonsynonymous SNV	ENSG00000169962:ENST00000339381:exon1:c.G13A:p.A5T	NA	NA	1p36.33	NA	NA	NA	NA	rs76755863	0.03	0.03	0.029	0.0189696	0.0626	NA	0.0231	0.0053	0.0092	0.07	NA	0.03	0.0041	0.048	0.07	0.44	T	0.079	B	0.021	B	0.696	U	1.000	N	0	N	-2.47	D	-0.925	T	0.043	T	0.022	2.587	14.61	-2.24	-0.202	0.098	1.114	2.587031	2.587031	0.04	0.065105	0.013434	NA	NA	NA	9.1576284
736	6	29576393	29576393	A	G	exonic	GABBR1	NA	synonymous SNV	GABBR1:NM_021903:exon11:c.T1626C:p.F542F,GABBR1:NM_021904:exon15:c.T1791C:p.F597F,GABBR1:NM_001470:exon16:c.T1977C:p.F659F	exonic	ENSG00000204681	NA	synonymous SNV	ENSG00000204681:ENST00000355973:exon11:c.T1626C:p.F542F,ENSG00000204681:ENST00000377012:exon11:c.T1626C:p.F542F,ENSG00000204681:ENST00000377016:exon15:c.T1791C:p.F597F,ENSG00000204681:ENST00000377034:exon16:c.T1977C:p.F659F	Score=483;Name=lod=122	NA	6p22.1	NA	NA	NA	NA	rs29230	0.17	0.17	0.145	0.213259	0.1531	0.252	0.2017	0.1467	0.3333	0.14	0.24	0.15	0.14	0.1843	0.24	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.072	T	0.060	T	.	0.99	9.044	2.66	0.541	2.255	6.844	0.990308	NA	NA	0.172637	0.160821	ID=COSM451139;OCCURENCE=1(breast)	0.188	NA	9.1566296
736	1	144866662	144866662	T	C	exonic	PDE4DIP	NA	synonymous SNV	PDE4DIP:NM_001198834:exon34:c.A5580G:p.E1860E,PDE4DIP:NM_014644:exon34:c.A5580G:p.E1860E,PDE4DIP:NM_001198832:exon36:c.A5262G:p.E1754E	exonic	ENSG00000178104	NA	synonymous SNV	ENSG00000178104:ENST00000369354:exon34:c.A5580G:p.E1860E,ENSG00000178104:ENST00000369356:exon34:c.A5580G:p.E1860E,ENSG00000178104:ENST00000313382:exon36:c.A5262G:p.E1754E,ENSG00000178104:ENST00000530740:exon36:c.A5835G:p.E1945E,ENSG00000178104:ENST00000369359:exon37:c.A5988G:p.E1996E	Score=597;Name=lod=357	NA	1q21.1	Score=799;Name=V$OLF1_01	NA	NA	NA	rs1064044	0.53	0.53	0.545	NA	NA	NA	NA	NA	NA	0.5	0.61	0.51	0.5	0.5103	0.61	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.075	T	0.055	T	.	1.473	10.87	2.05	0.354	0.268	6.847	1.472556	1.472556	NA	NA	NA	NA	0.507	NA	9.1563666
737	5	7835555	7835555	C	G	exonic	C5orf49	NA	nonsynonymous SNV	C5orf49:NM_001089584:exon2:c.G204C:p.Q68H	exonic	ENSG00000215217	NA	nonsynonymous SNV	ENSG00000215217:ENST00000399810:exon2:c.G204C:p.Q68H,ENSG00000215217:ENST00000509627:exon2:c.G204C:p.Q68H	Score=448;Name=lod=88	NA	5p15.31	NA	NA	NA	NA	rs6883562	0.17	0.17	0.175	0.177316	0.2217	0.0972	0.1715	0.1762	0.2198	0.22	0.09	0.19	0.18	0.2134	0.24	0.08	T	0.965	D	0.471	P	.	.	0.838	P	1.7	L	1.47	T	-1.035	T	0.000	T	0.179	3.006	16.02	1.68	0.625	0.512	5.371	3.005516	3.005516	0.08	0.243756	0.202799	NA	0.217	NA	9.1544774
737	9	115932012	115932012	G	T	exonic	FKBP15	NA	nonsynonymous SNV	FKBP15:NM_015258:exon26:c.C2977A:p.P993T	exonic	ENSG00000119321	NA	nonsynonymous SNV	ENSG00000119321:ENST00000238256:exon26:c.C2977A:p.P993T,ENSG00000119321:ENST00000446284:exon26:c.C3052A:p.P1018T	NA	NA	9q32	NA	NA	NA	NA	rs57348436	0.04	0.04	0.037	0.0613019	0.0467	0.0387	0.0317	0.0363	0.1544	0.04	0.02	0.03	0.04	0.0694	0.12	0.05	D	0.253	B	0.128	B	.	.	1.000	N	1.61	L	1.6	T	-1.058	T	0.009	T	0.044	1.167	9.749	2.72	0.532	-0.337	6.219	1.167001	NA	0.02	0.063213	0.045695	NA	0.087	NA	9.1540204
737	1	221055463	221055463	G	A	intronic	HLX	NA	NA	NA	exonic	ENSG00000136630	NA	nonsynonymous SNV	ENSG00000136630:ENST00000549319:exon1:c.G88A:p.G30S	NA	NA	1q41	NA	NA	NA	NA	rs2247213	0.29	0.29	0.31	0.298922	0.34	0.0962	0.2911	0.4675	0.2434	0.34	0.1	0.27	0.45	0.3211	0.48	0.2	T	.	.	.	.	.	.	1.000	P	.	.	-2.84	D	-1.060	T	0.000	T	0.021	1.593	11.28	-3.56	-1.254	-3.795	6.717	1.592851	1.592851	NA	0.352257	0.427826	NA	0.442	NA	9.1533097
737	6	31540757	31540757	A	C	exonic	LTA	NA	nonsynonymous SNV	LTA:NM_000595:exon3:c.A152C:p.H51P,LTA:NM_001159740:exon3:c.A152C:p.H51P	exonic	ENSG00000226979	NA	nonsynonymous SNV	ENSG00000226979:ENST00000418386:exon3:c.A152C:p.H51P,ENSG00000226979:ENST00000454783:exon3:c.A152C:p.H51P	NA	NA	6p21.33	NA	NA	Name=2	NA	rs2229092	0.03	0.03	0.039	0.0269569	0.0616	0.0129	0.0331	0.0038	0.0327	0.06	0.02	0.04	0.01	0.0485	0.07	0.27	T	0.0	B	0.001	B	0.587	N	1.000	N	0.805	L	2.28	T	-0.940	T	0.008	T	0.084	-0.176	3.141	-2.81	-0.226	0.011	0.152	-0.1764	NA	0.34	0.070137	0.014229	NA	0.036	NA	9.1530964
737	14	20852267	20852267	C	T	exonic	TEP1	NA	nonsynonymous SNV	TEP1:NM_007110:exon24:c.G3464A:p.R1155Q	exonic	ENSG00000129566	NA	nonsynonymous SNV	ENSG00000129566:ENST00000555008:exon12:c.G1514A:p.R505Q,ENSG00000129566:ENST00000556935:exon22:c.G3140A:p.R1047Q,ENSG00000129566:ENST00000262715:exon24:c.G3464A:p.R1155Q,ENSG00000129566:ENST00000555727:exon24:c.G3464A:p.R1155Q	Score=395;Name=lod=54	NA	14q11.2	Score=832;Name=V$AP4_01	NA	NA	NA	rs2228041	0.03	0.03	0.034	0.0335463	0.0686	NA	0.0303	0.003	0.0757	0.08	NA	0.02	NA	0.0523	0.08	1	T	0.002	B	0.001	B	0.062	N	0.000	P	-1.445	N	-1.47	T	-1.008	T	0.008	T	0.08	-1.497	0.017	0.586	-0.147	0.476	4.184	-1.496953	NA	1	0.061744	0.011348	NA	0.007	NA	9.1506894
737	15	31294343	31294343	A	T	exonic	TRPM1	NA	nonsynonymous SNV	TRPM1:NM_001252020:exon27:c.T4611A:p.H1537Q,TRPM1:NM_002420:exon27:c.T4494A:p.H1498Q,TRPM1:NM_001252024:exon28:c.T4560A:p.H1520Q	exonic	ENSG00000134160	NA	nonsynonymous SNV	ENSG00000134160:ENST00000558768:exon25:c.T4266A:p.H1422Q,ENSG00000134160:ENST00000397795:exon27:c.T4494A:p.H1498Q,ENSG00000134160:ENST00000542188:exon27:c.T4611A:p.H1537Q,ENSG00000134160:ENST00000256552:exon28:c.T4560A:p.H1520Q	NA	NA	15q13.3	NA	NA	NA	NA	rs12898290	0.05	0.05	0.037	0.0682907	0.0616	0.0169	0.049	0.0772	0.1299	0.05	0.02	0.07	0.07	0.0653	0.075	0.17	T	0.0	B	0.002	B	0.661	N	1.000	N	-0.145	N	0.95	T	-1.039	T	0.002	T	0.036	-1.862	0.008	-10.3	-4.828	-4.635	1.865	-1.862085	NA	0.3	0.056007	0.075476	NA	0.051	NA	9.1504264
737	12	52967117	52967117	C	T	exonic	KRT74	NA	nonsynonymous SNV	KRT74:NM_175053:exon1:c.G445A:p.D149N	exonic	ENSG00000170484	NA	nonsynonymous SNV	ENSG00000170484:ENST00000305620:exon1:c.G445A:p.D149N,ENSG00000170484:ENST00000549343:exon1:c.G445A:p.D149N	Score=461;Name=lod=100	NA	12q13.13	NA	NA	NA	NA	rs73107581	0.07	0.07	0.047	0.048722	0.0795	0.0972	0.036	0.0151	0.0215	0.08	0.11	0.05	0.02	0.0495	0.11	1	T	0.001	B	0.004	B	0.283	N	0.791	P	-1.52	N	-2.94	D	-0.866	T	0.009	T	0.018	-0.686	1.016	1.88	0.322	0.554	6.933	-0.686496	NA	1	0.054419	0.017022	NA	0.065	NA	9.1499144
737	14	96777468	96777468	G	C	exonic	ATG2B	NA	nonsynonymous SNV	ATG2B:NM_018036:exon28:c.C4147G:p.Q1383E	exonic	ENSG00000066739	NA	nonsynonymous SNV	ENSG00000066739:ENST00000359933:exon28:c.C4147G:p.Q1383E	NA	NA	14q32.2	NA	NA	Name=3	NA	rs3759601	0.3	0.3	0.258	0.2498	0.4066	0.1776	0.4568	0.1142	0.1994	0.42	0.21	0.44	0.1	0.3552	0.44	1	T	0.001	B	0.004	B	0.306	N	1.000	P	1.265	L	0.93	T	-0.944	T	0.000	T	0.045	0.228	5.23	2.55	0.241	1.403	8.827	0.228002	NA	0.95	0.422558	0.171357	NA	0.312	NA	9.1489754
737	7	4213975	4213975	A	G	exonic	SDK1	NA	nonsynonymous SNV	SDK1:NM_001079653:exon7:c.A383G:p.H128R,SDK1:NM_152744:exon33:c.A4922G:p.H1641R	exonic	ENSG00000146555	NA	nonsynonymous SNV	ENSG00000146555:ENST00000389531:exon33:c.A4922G:p.H1641R,ENSG00000146555:ENST00000404826:exon33:c.A4922G:p.H1641R	Score=420;Name=lod=68	NA	7p22.2	NA	NA	NA	NA	rs671694	0.8	0.8	0.804	0.799321	0.7266	0.7619	0.781	0.9803	0.681	0.73	0.76	0.79	0.97	0.7525	0.97	0.81	T	0.0	B	0.001	B	0.001	N	1.000	P	-1.935	N	0.55	T	-0.963	T	0.000	T	0.28	-0.569	1.436	4.91	1.073	3.076	11.761	-0.568836	NA	0.71	0.706395	0.943259	NA	0.819	NA	9.1478384
737	9	116132092	116132092	G	C	exonic	BSPRY	NA	nonsynonymous SNV	BSPRY:NM_017688:exon6:c.G879C:p.Q293H	exonic	ENSG00000119411	NA	nonsynonymous SNV	ENSG00000119411:ENST00000374183:exon6:c.G879C:p.Q293H	Score=607;Name=lod=390	NA	9q32	NA	NA	NA	NA	rs818711	0.05	0.05	0.056	0.0601038	0.0646	0.0734	0.0476	0.0045	0.1258	0.06	0.08	0.05	0.01	0.0635	0.08	0.01	D	0.009	B	0.006	B	0.001	N	0.960	P	1.04	L	2.55	T	-1.062	T	0.002	T	0.044	1.815	12.03	1.49	0.255	0.918	4.800	1.814651	1.814651	0.11	0.058042	0.013599	NA	0.036	NA	9.1471914
737	7	57529392	57529392	A	C	exonic	ZNF716	NA	nonsynonymous SNV	ZNF716:NM_001159279:exon4:c.A1225C:p.K409Q	exonic	ENSG00000182111	NA	nonsynonymous SNV	ENSG00000182111:ENST00000420713:exon4:c.A1225C:p.K409Q	Score=443;Name=lod=84	NA	7p11.2	NA	Name=KAP1,ZNF274	NA	NA	rs13235676	0.41	0.41	0.369	0.421126	0.3797	0.5397	0.4798	0.3215	0.4346	0.37	0.54	0.44	0.33	0.4139	0.54	0.09	T	0.407	B	0.119	B	.	.	1.000	P	1.74	L	2.19	T	-0.937	T	0.000	T	0.021	0.727	7.864	0.195	0.257	-2.138	4.823	0.726705	NA	0.06	0.393149	0.346098	NA	0.449	NA	9.1465844
737	7	37947164	37947164	G	T	exonic	SFRP4	NA	nonsynonymous SNV	SFRP4:NM_003014:exon6:c.C958A:p.P320T	exonic	ENSG00000106483	NA	nonsynonymous SNV	ENSG00000106483:ENST00000436072:exon6:c.C958A:p.P320T	Score=300;Name=lod=22	NA	7p14.1	Score=808;Name=V$COMP1_01	NA	NA	NA	rs1802073	0.51	0.51	0.478	0.542732	0.3877	0.5635	0.5519	0.6339	0.5511	0.39	0.54	0.52	0.63	0.4382	0.63	1	T	0.0	B	0.0	B	0.394	N	0.000	P	0.345	N	0.01	T	-0.915	T	0.000	T	0.069	1.667	11.53	3.05	0.371	0.326	4.467	1.667161	1.667161	0.69	0.361163	0.567635	NA	0.551	NA	9.1462704
738	20	56099114	56099114	C	G	exonic	CTCFL	NA	nonsynonymous SNV	CTCFL:NM_001269041:exon1:c.G148C:p.E50Q,CTCFL:NM_001269044:exon1:c.G148C:p.E50Q,CTCFL:NM_001269048:exon1:c.G148C:p.E50Q,CTCFL:NM_001269052:exon1:c.G148C:p.E50Q,CTCFL:NM_001269040:exon2:c.G148C:p.E50Q,CTCFL:NM_001269042:exon2:c.G148C:p.E50Q,CTCFL:NM_001269043:exon2:c.G148C:p.E50Q,CTCFL:NM_001269045:exon2:c.G148C:p.E50Q,CTCFL:NM_001269046:exon2:c.G148C:p.E50Q,CTCFL:NM_001269047:exon2:c.G148C:p.E50Q,CTCFL:NM_001269051:exon2:c.G148C:p.E50Q,CTCFL:NM_080618:exon3:c.G148C:p.E50Q	exonic	ENSG00000124092	NA	nonsynonymous SNV	ENSG00000124092:ENST00000422109:exon1:c.G148C:p.E50Q,ENSG00000124092:ENST00000426658:exon1:c.G148C:p.E50Q,ENSG00000124092:ENST00000432255:exon1:c.G148C:p.E50Q,ENSG00000124092:ENST00000433949:exon1:c.G148C:p.E50Q,ENSG00000124092:ENST00000243914:exon2:c.G148C:p.E50Q,ENSG00000124092:ENST00000371196:exon2:c.G148C:p.E50Q,ENSG00000124092:ENST00000422869:exon2:c.G148C:p.E50Q,ENSG00000124092:ENST00000423479:exon2:c.G148C:p.E50Q,ENSG00000124092:ENST00000429804:exon2:c.G148C:p.E50Q	NA	NA	20q13.31	NA	Name=HEY1	NA	NA	rs6070128	0.32	0.32	0.291	0.285144	0.4165	0.3651	0.2882	0.0862	0.3344	0.41	0.38	0.32	0.09	0.3644	0.41	0.39	T	0.012	B	0.007	B	0.522	N	1.000	P	0	N	3.39	T	-0.903	T	0.000	T	0.038	0.495	6.687	-4.73	-1.292	-0.230	9.003	0.495343	NA	0.18	0.408488	0.128234	ID=COSM1412683;OCCURENCE=1(large_intestine)	0.268	NA	9.1439454
738	22	32754103	32754103	A	C	exonic	RFPL3	NA	nonsynonymous SNV	RFPL3:NM_001098535:exon1:c.A45C:p.Q15H	exonic	ENSG00000128276	NA	nonsynonymous SNV	ENSG00000128276:ENST00000249007:exon1:c.A45C:p.Q15H	NA	NA	22q12.3	NA	NA	NA	NA	rs58637580	0.14	0.14	0.09	0.144569	0.0408	0.4583	0.0893	0.0265	0.1268	0.04	0.4	0.09	0.01	0.1002	0.4	1	T	0.0	B	0.0	B	.	.	1.000	P	0.345	N	0.66	T	-0.977	T	0.000	T	0.023	-1.043	0.203	-1.26	-1.119	-2.692	1.424	-1.042871	NA	1	0.048616	0.031321	NA	0.087	NA	9.1437174
738	7	94540416	94540416	A	G	exonic	PPP1R9A	NA	nonsynonymous SNV	PPP1R9A:NM_001166161:exon1:c.A991G:p.M331V,PPP1R9A:NM_001166162:exon1:c.A991G:p.M331V,PPP1R9A:NM_001166163:exon1:c.A991G:p.M331V,PPP1R9A:NM_001166160:exon2:c.A991G:p.M331V,PPP1R9A:NM_017650:exon2:c.A991G:p.M331V	exonic	ENSG00000158528	NA	nonsynonymous SNV	ENSG00000158528:ENST00000289495:exon1:c.A991G:p.M331V,ENSG00000158528:ENST00000456331:exon1:c.A991G:p.M331V,ENSG00000158528:ENST00000340694:exon2:c.A991G:p.M331V,ENSG00000158528:ENST00000424654:exon2:c.A991G:p.M331V,ENSG00000158528:ENST00000433360:exon2:c.A991G:p.M331V,ENSG00000158528:ENST00000433881:exon2:c.A991G:p.M331V	NA	NA	7q21.3	Score=845;Name=V$PPARG_03	NA	NA	NA	rs10230714	0.16	0.16	0.172	0.199481	0.0507	0.2183	0.1455	0.3525	0.1646	0.04	0.2	0.13	0.33	0.0981	0.33	.	.	0.0	B	0.001	B	0.074	N	1.000	P	0.145	N	-3.22	D	-1.080	T	0.000	T	0.036	-1.732	0.011	0.326	-0.028	0.585	5.168	-1.732466	NA	0.46	0.04186	0.32138	NA	0.203	NA	9.1426734
738	1	55060362	55060362	G	A	exonic	ACOT11	NA	nonsynonymous SNV	ACOT11:NM_015547:exon6:c.G605A:p.G202D,ACOT11:NM_147161:exon6:c.G605A:p.G202D	exonic	ENSG00000162390	NA	nonsynonymous SNV	ENSG00000162390:ENST00000343744:exon6:c.G605A:p.G202D,ENSG00000162390:ENST00000371316:exon6:c.G605A:p.G202D	NA	NA	1p32.3	NA	NA	NA	NA	rs1702003	0.19	0.19	0.195	0.255391	0.0417	0.1825	0.1239	0.5371	0.2628	0.04	0.18	0.11	0.48	0.1194	0.48	0.89	T	0.0	B	0.001	B	0.184	N	1.000	P	-1.61	N	3.01	T	-0.944	T	0.000	T	0.108	-0.567	1.445	3.7	0.297	1.962	6.005	-0.566615	NA	0.93	0.029651	0.448479	NA	0.181	NA	9.1425824
738	6	31322980	31322980	C	T	exonic	HLA-B	NA	nonsynonymous SNV	HLA-B:NM_005514:exon5:c.G916A:p.V306I	exonic	ENSG00000234745	NA	nonsynonymous SNV	ENSG00000234745:ENST00000412585:exon5:c.G916A:p.V306I	NA	NA	6p21.33	NA	Name=Pol2,Pol2-4H8	NA	NA	rs1131500	0.49	0.49	0.508	0.544529	0.3857	0.5744	0.5	0.6604	0.5521	0.37	0.53	0.5	0.63	0.4472	0.63	1	T	0.002	B	0.002	B	0.128	N	1.000	P	.	.	6.13	T	-0.968	T	0.000	T	0.131	0.842	8.403	-3.9	-0.635	-1.343	3.076	0.842479	NA	1	0.358066	0.576109	NA	0.5	NA	9.1423674
738	2	233245026	233245026	G	A	exonic	ALPP	NA	nonsynonymous SNV	ALPP:NM_001632:exon6:c.G788A:p.R263H	exonic	ENSG00000163283	NA	nonsynonymous SNV	ENSG00000163283:ENST00000392027:exon6:c.G788A:p.R263H	NA	NA	2q37.1	Score=778;Name=V$MYCMAX_03	NA	NA	NA	rs2853378	0.1	0.1	NA	0.10004	0.1004	0.2242	0.0605	0.0507	0.0665	0.09	0.19	0.06	0.04	0.0915	0.19	0.93	T	0.007	B	0.001	B	0.991	N	1.000	P	-0.53	N	-4.04	D	-0.828	T	0.002	T	0.093	-1.655	0.012	-0.177	0.135	0.146	7.139	-1.655324	NA	0.55	NA	NA	NA	0.043	NA	9.1414334
738	13	25052393	25052393	G	T	exonic	PARP4	NA	nonsynonymous SNV	PARP4:NM_006437:exon13:c.C1470A:p.H490Q	exonic	ENSG00000102699	NA	nonsynonymous SNV	ENSG00000102699:ENST00000381989:exon13:c.C1470A:p.H490Q	Score=505;Name=lod=150	NA	13q12.12	Score=679;Name=V$BRACH_01	NA	NA	NA	rs79107024	0.13	0.13	0.158	NA	NA	NA	NA	NA	NA	0.14	0.06	0.12	0.2	0.1932	0.2	0.51	T	0.011	B	0.009	B	0.789	N	0.996	N	1.865	L	2.59	T	-0.934	T	0.000	T	0.13	-0.136	3.333	-0.744	-0.008	-0.111	3.671	-0.136204	NA	0.08	NA	NA	NA	NA	NA	9.1401334
738	8	36767024	36767024	T	C	exonic	KCNU1	NA	nonsynonymous SNV	KCNU1:NM_001031836:exon21:c.T2302C:p.W768R	exonic	ENSG00000215262	NA	nonsynonymous SNV	ENSG00000215262:ENST00000399881:exon21:c.T2302C:p.W768R,ENSG00000215262:ENST00000522372:exon21:c.T2302C:p.W768R	Score=614;Name=lod=417	NA	8p11.23	NA	NA	NA	NA	rs28608091	0.37	0.37	0.341	0.379792	0.4006	0.376	0.4827	0.3268	0.3609	0.39	0.35	0.47	0.29	0.3942	0.47	0.89	T	0.0	B	0.0	B	0.071	N	0.000	P	-0.92	N	1.06	T	-0.919	T	0.000	T	0.097	-0.731	0.875	2.64	0.356	1.370	8.636	-0.730645	NA	1	0.398702	0.335516	NA	0.246	NA	9.1398314
738	12	6619284	6619284	C	G	exonic	NCAPD2	NA	nonsynonymous SNV	NCAPD2:NM_014865:exon4:c.C247G:p.Q83E	exonic	ENSG00000010292	NA	nonsynonymous SNV	ENSG00000010292:ENST00000315579:exon4:c.C247G:p.Q83E,ENSG00000010292:ENST00000539714:exon5:c.C247G:p.Q83E	Score=546;Name=lod=221	NA	12p13.31	NA	NA	NA	NA	rs714774	0.79	0.79	0.79	0.795527	0.7256	0.6706	0.8285	0.9826	0.7198	0.73	0.67	0.82	0.98	0.7536	0.98	1	T	0.0	B	0.001	B	0.000	N	0.000	P	-1.735	N	1.17	T	-0.942	T	0.000	T	0.062	-0.066	3.678	5.32	1.260	3.727	14.549	-0.066079	NA	1	0.716163	0.942805	NA	0.826	NA	9.1379704
738	16	74664743	74664743	T	C	exonic	RFWD3	NA	nonsynonymous SNV	RFWD3:NM_018124:exon10:c.A1690G:p.I564V	exonic	ENSG00000168411	NA	nonsynonymous SNV	ENSG00000168411:ENST00000361070:exon10:c.A1690G:p.I564V,ENSG00000168411:ENST00000571750:exon11:c.A1690G:p.I564V	Score=278;Name=lod=18	NA	16q23.1	NA	NA	NA	NA	rs7193541	0.42	0.42	0.414	0.392772	0.3936	0.4613	0.2896	0.5166	0.227	0.39	0.43	0.32	0.53	0.381	0.53	0.71	T	0.008	B	0.005	B	0.000	N	0.092	P	0.15	N	1.55	T	-0.928	T	0.000	T	0.125	1.004	9.1	3.41	0.941	1.552	7.678	1.00395	NA	0.74	0.422907	0.509554	ID=COSM148117;OCCURENCE=1(stomach)	0.428	NA	9.1358264
739	19	56369189	56369189	G	A	exonic	NLRP4	NA	nonsynonymous SNV	NLRP4:NM_134444:exon3:c.G430A:p.A144T	exonic	ENSG00000160505	NA	nonsynonymous SNV	ENSG00000160505:ENST00000587891:exon1:c.G205A:p.A69T,ENSG00000160505:ENST00000301295:exon3:c.G430A:p.A144T,ENSG00000160505:ENST00000346986:exon3:c.G430A:p.A144T,ENSG00000160505:ENST00000587464:exon3:c.G430A:p.A144T	NA	NA	19q13.43	NA	NA	NA	NA	rs441827	0.48	0.48	0.456	0.515775	0.3827	0.6657	0.464	0.4463	0.6288	0.39	0.66	0.49	0.39	0.4464	0.66	0.74	T	0.0	B	0.0	B	.	.	1.000	P	-0.805	N	-1.52	D	-1.048	T	0.000	T	0.013	-1.268	0.046	-6.89	-2.679	-0.507	9.486	-1.267515	NA	1	0.369767	0.433273	NA	0.42	NA	9.1344664
739	19	4442336	4442336	C	T	exonic	CHAF1A	NA	nonsynonymous SNV	CHAF1A:NM_005483:exon14:c.C2768T:p.A923V	exonic	ENSG00000167670	NA	nonsynonymous SNV	ENSG00000167670:ENST00000589648:exon1:c.C86T:p.A29V,ENSG00000167670:ENST00000301280:exon14:c.C2768T:p.A923V	Score=300;Name=lod=22	NA	19p13.3	NA	Name=ZNF263,Pol2-4H8	NA	NA	rs9352	0.57	0.57	0.542	0.567891	0.5427	0.6657	0.7507	0.4191	0.5644	0.53	0.66	0.72	0.44	0.5994	0.72	0	D	0.665	P	0.073	B	.	.	0.000	P	0.69	N	1.94	T	-1.025	T	0.000	T	0.046	2.842	15.47	0.092	0.178	0.240	6.789	2.842317	2.842317	0.17	0.557442	0.443713	NA	0.514	NA	9.1337914
739	11	4870261	4870261	G	C	exonic	OR51S1	NA	nonsynonymous SNV	OR51S1:NM_001004758:exon1:c.C178G:p.Q60E	exonic	ENSG00000176922	NA	nonsynonymous SNV	ENSG00000176922:ENST00000322101:exon1:c.C178G:p.Q60E	NA	NA	11p15.4	NA	Name=CTCF	NA	NA	rs11602499	0.26	0.26	0.256	0.274161	0.4066	0.0675	0.2579	0.2352	0.4151	0.4	0.06	0.33	0.25	0.3647	0.43	1	T	0.0	B	0.0	B	0.019	N	1.000	P	-1.96	N	4.19	T	-0.945	T	0.000	T	0.017	-2.537	0.003	4.85	1.277	0.343	14.146	-2.537173	NA	1	0.430433	0.281009	NA	0.254	NA	9.1316004
739	7	142724062	142724062	C	T	exonic	OR9A2	NA	nonsynonymous SNV	OR9A2:NM_001001658:exon1:c.G158A:p.R53H	exonic	ENSG00000179468	NA	nonsynonymous SNV	ENSG00000179468:ENST00000350513:exon1:c.G158A:p.R53H	NA	NA	7q34	Score=810;Name=V$COMP1_01	NA	NA	NA	rs9885986	0.08	0.08	0.084	0.0876597	0.0577	0.0377	0.0548	0.1384	0.1247	0.05	0.04	0.07	0.17	0.0765	0.17	1	T	0.056	B	0.015	B	0.401	N	1.000	P	0.735	N	5.28	T	-0.924	T	0.000	T	0.04	-0.258	2.76	2.31	0.506	-0.748	6.005	-0.258015	NA	0.05	0.068372	0.127326	NA	0.072	NA	9.1307614
739	12	47186770	47186770	C	T	exonic	SLC38A4	NA	nonsynonymous SNV	SLC38A4:NM_001143824:exon2:c.G85A:p.G29R,SLC38A4:NM_018018:exon3:c.G85A:p.G29R	exonic	ENSG00000139209	NA	nonsynonymous SNV	ENSG00000139209:ENST00000447411:exon2:c.G85A:p.G29R,ENSG00000139209:ENST00000546940:exon2:c.G85A:p.G29R,ENSG00000139209:ENST00000266579:exon3:c.G85A:p.G29R,ENSG00000139209:ENST00000547477:exon3:c.G85A:p.G29R	NA	NA	12q13.11	NA	Name=FOXA1_(C-20),FOXA1_(SC-101058)	NA	NA	rs2429467	0.12	0.12	0.076	0.136581	0.0417	0.245	0.2248	0.0129	0.227	0.04	0.25	0.22	0.01	0.1118	0.25	0.61	T	0.345	B	0.022	B	0.001	N	1.000	P	0.69	N	3.81	T	-1.004	T	0.000	T	0.33	-0.672	1.062	-1.99	-1.137	0.061	8.125	-0.672454	NA	0.24	0.050698	0.031775	NA	0.087	NA	9.1291354
739	8	145112983	145112983	C	T	exonic	OPLAH	NA	nonsynonymous SNV	OPLAH:NM_017570:exon8:c.G1018A:p.V340I	exonic	ENSG00000178814	NA	nonsynonymous SNV	ENSG00000178814:ENST00000426825:exon8:c.G1018A:p.V340I	NA	NA	8q24.3	NA	NA	NA	NA	rs55916375	0.04	0.04	0.041	0.0333466	0.0835	0.001	0.0461	0.0174	0.0276	0.08	0.0017	0.05	0.02	0.0537	0.08	0.53	T	0.256	B	0.104	B	0.000	D	0.857	D	.	.	.	.	-1.050	T	0.004	T	0.015	-0.452	1.905	0.388	0.291	0.061	7.577	-0.452126	NA	0.17	0.067177	0.026034	NA	0.022	NA	9.1289564
739	5	5146377	5146377	T	C	exonic	ADAMTS16	NA	nonsynonymous SNV	ADAMTS16:NM_139056:exon3:c.T310C:p.S104P	exonic	ENSG00000145536	NA	nonsynonymous SNV	ENSG00000145536:ENST00000274181:exon3:c.T310C:p.S104P,ENSG00000145536:ENST00000511368:exon3:c.T310C:p.S104P	Score=361;Name=lod=39	NA	5p15.32	Score=780;Name=V$PPARG_03	Name=Pol2-4H8	NA	NA	rs1019747	0.51	0.51	0.485	0.494409	0.3857	0.5	0.5951	0.6248	0.3528	0.4	0.53	0.54	0.63	0.4375	0.63	0.15	T	0.0	B	0.004	B	0.010	N	0.999	P	-0.55	N	3.44	T	-1.024	T	0.000	T	0.03	1.879	12.24	0.125	-0.120	0.309	2.485	1.878622	1.878622	0.21	0.38138	0.569154	NA	0.558	NA	9.1287534
739	17	33464864	33464864	C	T	exonic	NLE1	NA	nonsynonymous SNV	NLE1:NM_018096:exon5:c.G506A:p.R169K	exonic	ENSG00000073536	NA	nonsynonymous SNV	ENSG00000073536:ENST00000442241:exon5:c.G506A:p.R169K	Score=620;Name=lod=441	NA	17q12	Score=884;Name=V$TAL1ALPHAE47_01	NA	NA	NA	rs7215209	0.82	0.82	0.816	0.848842	0.7048	0.9137	0.8602	0.8676	0.8967	0.7	0.92	0.84	0.87	0.78	0.92	1	T	0.0	B	0.001	B	0.000	N	0.000	P	-0.71	N	1.61	T	-0.961	T	0.000	T	0.037	0.456	6.477	3.95	0.414	2.347	6.497	0.456156	NA	1	0.719884	0.869496	NA	0.833	NA	9.1286494
739	3	10255002	10255002	C	G	exonic	IRAK2	NA	nonsynonymous SNV	IRAK2:NM_001570:exon5:c.C640G:p.R214G	exonic	ENSG00000134070	NA	nonsynonymous SNV	ENSG00000134070:ENST00000256458:exon5:c.C640G:p.R214G	NA	NA	3p25.3	NA	Name=PAX5-C20	Name=40	NA	rs35060588	0.04	0.04	0.04	0.0323482	0.0885	NA	0.0245	0.0008	0.0562	0.1	NA	0.03	NA	0.0552	0.1	0.33	T	0.002	B	0.001	B	0.352	N	1.000	P	1.465	L	1.32	T	-1.054	T	0.002	T	0.065	0.255	5.381	-0.447	0.080	0.088	0.808	0.255472	NA	0.08	0.061395	0.011575	NA	0.022	NA	9.1282384
739	11	4869649	4869649	G	A	exonic	OR51S1	NA	nonsynonymous SNV	OR51S1:NM_001004758:exon1:c.C790T:p.L264F	exonic	ENSG00000176922	NA	nonsynonymous SNV	ENSG00000176922:ENST00000322101:exon1:c.C790T:p.L264F	NA	NA	11p15.4	NA	NA	NA	NA	rs12361955	0.28	0.28	0.277	0.299321	0.4046	0.0675	0.2608	0.3411	0.4008	0.4	0.06	0.33	0.34	0.3702	0.43	0	D	0.003	B	0.007	B	0.019	N	1.000	P	-0.17	N	-0.74	T	-0.994	T	0.000	T	0.091	0.802	8.217	3.29	1.445	0.704	8.959	0.801715	NA	0.04	0.430433	0.348705	NA	0.319	NA	9.1281004
739	7	18066569	18066569	C	A	exonic	PRPS1L1	NA	nonsynonymous SNV	PRPS1L1:NM_175886:exon1:c.G837T:p.E279D	exonic	ENSG00000229937	NA	nonsynonymous SNV	ENSG00000229937:ENST00000506618:exon1:c.G837T:p.E279D	Score=561;Name=lod=255	NA	7p21.1	Score=884;Name=V$EVI1_02	NA	NA	NA	rs3800962	0.3	0.3	0.283	0.264776	0.4165	0.1548	0.3977	0.1974	0.2188	0.43	0.16	0.43	0.17	0.3658	0.43	1	T	0.0	B	0.001	B	.	.	.	.	0.31	N	-0.61	T	-1.022	T	0.000	T	0.023	-0.832	0.593	-2.11	-0.531	0.374	7.610	-0.832338	NA	1	0.423372	0.227851	NA	0.384	NA	9.1276614
739	17	43004436	43004436	G	A	exonic	KIF18B	NA	nonsynonymous SNV	KIF18B:NM_001264573:exon14:c.C2323T:p.P775S,KIF18B:NM_001265577:exon14:c.C2287T:p.P763S	exonic	ENSG00000186185	NA	nonsynonymous SNV	ENSG00000186185:ENST00000438933:exon13:c.C2323T:p.P775S,ENSG00000186185:ENST00000590129:exon13:c.C2350T:p.P784S,ENSG00000186185:ENST00000339151:exon14:c.C2296T:p.P766S,ENSG00000186185:ENST00000587309:exon14:c.C2323T:p.P775S,ENSG00000186185:ENST00000593135:exon14:c.C2287T:p.P763S	NA	NA	17q21.31	Score=912;Name=V$AREB6_03	NA	Name=5	NA	rs61739617	0.03	0.03	0.022	0.023762	0.0716	NA	0.0274	0.0045	0.0225	0.07	NA	0.03	0.01	0.0632	0.071	0.17	T	0.437	B	0.329	B	.	.	1.000	N	1.78	L	-0.84	T	-0.963	T	0.037	T	0.17	0.49	6.66	0.265	-0.044	0.279	3.068	0.490236	NA	0	0.071223	0.021503	NA	0.022	NA	9.1273104
739	17	73230963	73230963	G	A	intronic	NUP85	NA	NA	NA	exonic	ENSG00000125450	NA	nonsynonymous SNV	ENSG00000125450:ENST00000447371:exon16:c.G1343A:p.R448H	NA	NA	17q25.1	NA	NA	NA	NA	rs2291032	0.09	0.09	0.102	0.11262	0.002	0.1002	0.0706	0.2458	0.089	0.004	0.06	0.07	0.29	0.0385	0.29	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.988	T	0.000	T	0.053	1.534	11.08	-7.18	-1.986	-1.840	2.031	1.53383	1.53383	0	NA	NA	NA	0.123	NA	9.1261667
739	21	46086757	46086757	G	A	exonic	KRTAP12-2	NA	nonsynonymous SNV	KRTAP12-2:NM_181684:exon1:c.C47T:p.A16V	exonic	ENSG00000221864	NA	nonsynonymous SNV	ENSG00000221864:ENST00000360770:exon1:c.C47T:p.A16V	NA	NA	21q22.3	NA	Name=HA-E2F1,c-Myc	Name=3	NA	rs7275298	0.68	0.68	0.705	0.771565	0.7634	0.6597	0.7493	0.8608	0.7904	0.68	0.59	0.71	0.78	0.739	0.84	0.31	T	0.002	B	0.003	B	.	.	1.000	P	-1.17	N	4.06	T	-1.071	T	0.000	T	0.04	1.02	9.164	-4.35	-1.420	-0.534	6.439	1.019523	NA	NA	0.705626	0.841207	NA	NA	NA	9.1253074
740	4	110901198	110901198	G	A	exonic	EGF	NA	nonsynonymous SNV	EGF:NM_001178131:exon13:c.G1998A:p.M666I,EGF:NM_001178130:exon14:c.G2124A:p.M708I,EGF:NM_001963:exon14:c.G2124A:p.M708I	exonic	ENSG00000138798	NA	nonsynonymous SNV	ENSG00000138798:ENST00000509793:exon13:c.G1998A:p.M666I,ENSG00000138798:ENST00000265171:exon14:c.G2124A:p.M708I,ENSG00000138798:ENST00000503392:exon14:c.G2124A:p.M708I	Score=566;Name=lod=267	NA	4q25	Score=909;Name=V$BRN2_01	NA	NA	NA	rs2237051	0.59	0.59	0.596	0.617812	0.3628	0.6726	0.5764	0.8759	0.5041	0.38	0.69	0.56	0.85	0.4658	0.85	0.46	T	0.0	B	0.0	B	0.002	N	1.000	P	-1.425	N	-2.71	D	-0.944	T	0.000	T	0.086	-0.768	0.766	1.54	-0.200	-0.107	1.653	-0.767643	NA	1	0.381047	0.8064	NA	0.659	NA	9.1236864
740	16	1268376	1268376	G	A	exonic	CACNA1H	NA	nonsynonymous SNV	CACNA1H:NM_001005407:exon32:c.G5594A:p.R1865Q,CACNA1H:NM_021098:exon33:c.G5612A:p.R1871Q	exonic	ENSG00000196557	NA	nonsynonymous SNV	ENSG00000196557:ENST00000565831:exon31:c.G5594A:p.R1865Q,ENSG00000196557:ENST00000358590:exon32:c.G5594A:p.R1865Q,ENSG00000196557:ENST00000348261:exon33:c.G5612A:p.R1871Q	NA	NA	16p13.3	NA	NA	NA	NA	rs58124832	0.03	0.03	0.023	0.0317492	0.0537	NA	0.0375	NA	0.0808	0.06	NA	0.04	NA	0.0979	0.06	0.47	T	0.165	B	0.049	B	0.094	N	1.000	N	1.24	L	-3.89	D	-0.397	T	0.264	T	0.157	0.126	4.679	1.04	0.154	4.055	6.714	0.126187	NA	0.75	0.058256	0.008531	NA	0.036	NA	9.1234774
740	10	5541181	5541181	T	C	exonic	CALML5	NA	nonsynonymous SNV	CALML5:NM_017422:exon1:c.A221G:p.K74R	exonic	ENSG00000178372	NA	nonsynonymous SNV	ENSG00000178372:ENST00000380332:exon1:c.A221G:p.K74R	NA	NA	10p15.1	NA	NA	NA	NA	rs10904516	0.34	0.34	0.081	0.353235	0.3221	0.3046	0.2334	0.5121	0.3057	0.32	0.29	0.25	0.5	0.3348	0.5	0.02	D	0.76	P	0.149	B	0.596	N	1.000	P	0.085	N	1.17	T	-0.928	T	0.000	T	0.041	-0.192	3.065	-1.79	-1.160	0.459	4.026	-0.192375	NA	0.64	0.053953	0.120291	ID=COSM146869;OCCURENCE=1(stomach),1(large_intestine)	NA	NA	9.1224804
740	2	160604936	160604936	G	A	exonic	MARCH7	NA	nonsynonymous SNV	MARCH7:NM_022826:exon5:c.G1135A:p.G379S	exonic	ENSG00000136536	NA	nonsynonymous SNV	ENSG00000136536:ENST00000409591:exon4:c.G1021A:p.G341S,ENSG00000136536:ENST00000539065:exon4:c.G967A:p.G323S,ENSG00000136536:ENST00000259050:exon5:c.G1135A:p.G379S,ENSG00000136536:ENST00000409175:exon7:c.G1135A:p.G379S	Score=665;Name=lod=670	NA	2q24.2	NA	NA	NA	NA	rs13024801	0.04	0.04	0.037	0.0449281	0.0676	0.004	0.0461	0.0318	0.0808	0.07	0.0017	0.07	0.03	0.0689	0.075	1	T	0.005	B	0.009	B	0.229	N	0.984	P	-0.145	N	1.66	T	-0.989	T	0.002	T	0.034	0.473	6.565	1.48	0.367	2.377	6.714	0.472641	NA	0.67	0.075233	0.042215	NA	0.029	NA	9.1216004
740	22	38122122	38122122	T	C	exonic	TRIOBP	NA	nonsynonymous SNV	TRIOBP:NM_001039141:exon7:c.T3559C:p.F1187L	exonic	ENSG00000100106	NA	nonsynonymous SNV	ENSG00000100106:ENST00000406386:exon7:c.T3559C:p.F1187L	Score=389;Name=lod=51	NA	22q13.1	NA	NA	NA	NA	rs5756795	0.37	0.37	0.351	0.336661	0.3877	0.5863	0.2867	0.1543	0.3088	0.38	0.58	0.31	0.17	0.3934	0.58	0.11	T	0.006	B	0.006	B	.	.	0.000	P	0.345	N	2.26	T	-0.970	T	0.000	T	0.101	2.265	13.53	2.89	0.893	1.321	4.678	2.265441	2.265441	0.02	0.430897	0.179878	NA	0.348	NA	9.1213364
740	4	170428901	170428901	C	T	exonic	NEK1	NA	nonsynonymous SNV	NEK1:NM_001199399:exon19:c.G1585A:p.A529T,NEK1:NM_001199400:exon19:c.G1660A:p.A554T,NEK1:NM_012224:exon20:c.G1792A:p.A598T,NEK1:NM_001199398:exon21:c.G1744A:p.A582T,NEK1:NM_001199397:exon22:c.G1876A:p.A626T	exonic	ENSG00000137601	NA	nonsynonymous SNV	ENSG00000137601:ENST00000510533:exon19:c.G1660A:p.A554T,ENSG00000137601:ENST00000512193:exon19:c.G1585A:p.A529T,ENSG00000137601:ENST00000439128:exon20:c.G1792A:p.A598T,ENSG00000137601:ENST00000511633:exon21:c.G1744A:p.A582T,ENSG00000137601:ENST00000507142:exon22:c.G1876A:p.A626T	Score=419;Name=lod=67	NA	4q33	NA	NA	NA	NA	rs33933790	0.04	0.04	0.036	0.023762	0.0795	NA	0.0346	0.0038	0.0102	0.09	NA	0.03	0.01	0.0526	0.09	0.3	T	0.146	B	0.128	B	0.019	N	0.937	D	1.21	L	-0.53	T	-1.084	T	0.012	T	0.044	2.889	15.63	1.79	0.363	0.194	7.548	2.889056	2.889056	0.23	0.080073	0.017101	NA	0.036	NA	9.1211604
740	4	47560015	47560015	A	G	exonic	ATP10D	NA	nonsynonymous SNV	ATP10D:NM_020453:exon12:c.A2159G:p.N720S	exonic	ENSG00000145246	NA	nonsynonymous SNV	ENSG00000145246:ENST00000273859:exon12:c.A2159G:p.N720S	NA	NA	4p12	NA	NA	NA	NA	rs34169638	0.09	0.09	0.078	0.0842652	0.0736	0.2054	0.1282	0.0038	0.0481	0.07	0.19	0.1	0.0041	0.076	0.19	0.42	T	0.001	B	0.004	B	0.651	N	1.000	P	-0.275	N	1.15	T	-1.012	T	0.000	T	0.004	1.213	9.922	-6.8	-1.487	-0.308	7.082	1.212541	NA	0.21	0.064302	0.013618	NA	0.043	NA	9.1194314
740	19	9362297	9362297	C	T	exonic	OR7E24	NA	nonsynonymous SNV	OR7E24:NM_001079935:exon1:c.C578T:p.S193F	exonic	ENSG00000237521	NA	nonsynonymous SNV	ENSG00000237521:ENST00000456448:exon1:c.C578T:p.S193F	NA	NA	19p13.2	NA	NA	NA	NA	rs12980833	0.07	0.07	0.058	0.0864617	0.0656	0.1042	0.0331	0.0439	0.1851	0.07	0.11	0.04	0.06	0.0737	0.11	0.01	D	0.183	B	0.166	B	.	.	1.000	P	2.585	M	8.71	T	-1.027	T	0.000	T	0.058	0.695	7.709	1.13	0.278	0.478	3.373	0.694652	NA	0.01	0.075608	0.04693	NA	0.065	NA	9.1184254
740	1	156563726	156563726	A	C	exonic	APOA1BP	NA	synonymous SNV	APOA1BP:NM_144772:exon6:c.A717C:p.I239I	exonic	ENSG00000163382	NA	nonsynonymous SNV	ENSG00000163382:ENST00000368234:exon6:c.A661C:p.I221L	Score=521;Name=lod=175	NA	1q23.1	NA	Name=Pol2	NA	NA	rs6427322	0.94	0.94	0.933	0.928514	0.9592	0.9722	0.9568	0.8638	0.9192	0.96	0.97	0.96	0.88	0.9551	0.97	0.64	T	0.0	B	0.0	B	0.000	D	0.000	P	.	.	0.73	T	-1.006	T	0.022	T	.	-0.161	3.212	2.99	0.129	2.202	4.425	-0.161431	NA	1	0.969767	0.857694	NA	0.87	NA	9.115933
740	5	79030338	79030338	A	G	exonic	CMYA5	NA	nonsynonymous SNV	CMYA5:NM_153610:exon2:c.A5750G:p.D1917G	exonic	ENSG00000164309	NA	nonsynonymous SNV	ENSG00000164309:ENST00000446378:exon2:c.A5750G:p.D1917G	NA	NA	5q14.1	NA	NA	NA	NA	rs16877150	0.15	0.15	0.17	0.126597	0.0596	0.3621	0.036	0.0749	0.0869	0.06	0.41	0.03	0.1	0.0928	0.41	0.66	T	0.001	B	0.001	B	0.556	N	1.000	P	-0.49	N	3.73	T	-0.904	T	0.000	T	0.049	0.186	4.999	-5.89	-0.999	0.096	2.303	0.185551	NA	0.45	0.065475	0.05786	NA	0.152	NA	9.1154584
741	7	77265140	77265140	G	A	exonic	PTPN12	NA	nonsynonymous SNV	PTPN12:NM_001131009:exon14:c.G1726A:p.E576K,PTPN12:NM_001131008:exon15:c.G1759A:p.E587K,PTPN12:NM_002835:exon15:c.G2116A:p.E706K	exonic	ENSG00000127947	NA	nonsynonymous SNV	ENSG00000127947:ENST00000407343:exon2:c.G562A:p.E188K,ENSG00000127947:ENST00000435495:exon14:c.G1726A:p.E576K,ENSG00000127947:ENST00000248594:exon15:c.G2116A:p.E706K,ENSG00000127947:ENST00000415482:exon15:c.G1759A:p.E587K	Score=445;Name=lod=86	NA	7q11.23	NA	NA	NA	NA	rs2230602	0.03	0.03	0.03	0.0309505	0.0865	0.001	0.0418	0.0038	0.0337	0.08	NA	0.04	0.01	0.0572	0.08	0.76	T	0.001	B	0.002	B	0.003	N	0.963	P	1.43	L	3.84	T	-1.032	T	0.003	T	0.387	1.816	12.03	2.11	0.599	0.444	8.134	1.81571	1.81571	0.1	0.0755	0.014072	NA	0.08	NA	9.1141334
741	8	12600720	12600720	T	A	exonic	LONRF1	NA	nonsynonymous SNV	LONRF1:NM_152271:exon2:c.A793T:p.I265L	exonic	ENSG00000154359	NA	nonsynonymous SNV	ENSG00000154359:ENST00000398246:exon2:c.A793T:p.I265L	Score=560;Name=lod=252	NA	8p23.1	NA	NA	Name=2	NA	rs1139354	0.03	0.03	0.03	0.0275559	0.0845	NA	0.0562	0.0038	0.0092	0.07	NA	0.06	0.002	0.054	0.081	1	T	0.0	B	0.0	B	0.086	N	0.000	P	-0.97	N	1.61	T	-0.997	T	0.001	T	0.057	-0.128	3.373	1.14	0.095	0.484	3.801	-0.127907	NA	1	0.081054	0.017827	NA	0.123	NA	9.1137794
741	2	68622914	68622914	G	A	exonic	PLEK	NA	nonsynonymous SNV	PLEK:NM_002664:exon9:c.G1019A:p.R340K	exonic	ENSG00000115956	NA	nonsynonymous SNV	ENSG00000115956:ENST00000234313:exon9:c.G1019A:p.R340K	Score=576;Name=lod=292	NA	2p13.3	Score=683;Name=V$PPARG_02	NA	NA	NA	rs1063479	0.83	0.83	0.826	0.857428	0.7087	0.9315	0.817	0.9554	0.8303	0.71	0.92	0.8	0.94	0.7864	0.94	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-0.27	N	-0.87	T	-0.926	T	0.000	T	0.017	0.679	7.631	4.49	0.430	4.577	10.019	0.678873	NA	1	0.724651	0.924421	NA	0.899	NA	9.1135824
741	11	16133413	16133413	A	G	exonic	SOX6	NA	synonymous SNV	SOX6:NM_001145811:exon7:c.T834C:p.T278T,SOX6:NM_001145819:exon7:c.T873C:p.T291T,SOX6:NM_017508:exon7:c.T843C:p.T281T,SOX6:NM_033326:exon7:c.T834C:p.T278T	exonic	ENSG00000110693	NA	synonymous SNV	ENSG00000110693:ENST00000316399:exon6:c.T834C:p.T278T,ENSG00000110693:ENST00000352083:exon7:c.T834C:p.T278T,ENSG00000110693:ENST00000396356:exon7:c.T834C:p.T278T,ENSG00000110693:ENST00000527619:exon7:c.T843C:p.T281T,ENSG00000110693:ENST00000528252:exon7:c.T834C:p.T278T,ENSG00000110693:ENST00000528429:exon7:c.T834C:p.T278T	Score=751;Name=lod=1497	NA	11p15.2	Score=859;Name=V$HEN1_02	Name=USF2,USF-1	Name=6	Score=96;Name=373347_0_+_96	rs4617548	0.53	0.53	0.513	0.505791	0.5119	0.6121	0.647	0.4569	0.3558	0.5	0.6	0.59	0.43	0.5273	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.286024	NA	NA	0.514788	0.502045	NA	0.457	NA	9.1126786
741	1	10460485	10460485	T	C	exonic	PGD	NA	synonymous SNV	PGD:NM_002631:exon3:c.T120C:p.D40D	exonic	ENSG00000142657	NA	nonsynonymous SNV	ENSG00000142657:ENST00000477958:exon3:c.T137C:p.M46T	Score=473;Name=lod=112	NA	1p36.22	NA	Name=Pol2	NA	NA	rs1049887	0.26	0.26	0.241	0.233826	0.3111	0.2817	0.3199	0.0658	0.271	0.31	0.3	0.35	0.09	0.2738	0.35	0	D	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.995	T	0.000	T	.	1.401	10.62	1.38	0.038	0.528	5.193	1.401045	1.401045	NA	0.302674	0.097594	ID=COSM146394;OCCURENCE=1(stomach),1(prostate)	0.188	NA	9.112426
741	12	4873163	4873163	G	T	exonic	GALNT8	NA	nonsynonymous SNV	GALNT8:NM_017417:exon9:c.G1543T:p.V515F	exonic	ENSG00000130035	NA	nonsynonymous SNV	ENSG00000130035:ENST00000252318:exon9:c.G1543T:p.V515F	NA	NA	12p13.32	NA	NA	NA	NA	rs1468556	0.37	0.37	0.349	0.329673	0.4225	0.3611	0.4251	0.2466	0.2464	0.42	0.39	0.41	0.25	0.3794	0.42	0.05	D	0.321	B	0.106	B	0.142	N	1.000	P	0.97	L	1.7	T	-1.032	T	0.000	T	0.275	0.829	8.342	-7.55	-1.811	-0.158	8.971	0.828853	NA	0.05	0.419651	0.296187	ID=COSM1179986;OCCURENCE=1(prostate)	0.37	NA	9.1117824
741	8	133637659	133637659	G	A	exonic	LRRC6	NA	nonsynonymous SNV	LRRC6:NM_012472:exon6:c.C695T:p.T232I	exonic	ENSG00000129295	NA	nonsynonymous SNV	ENSG00000129295:ENST00000250173:exon6:c.C695T:p.T232I,ENSG00000129295:ENST00000518642:exon6:c.C695T:p.T232I,ENSG00000129295:ENST00000519595:exon6:c.C695T:p.T232I	NA	NA	8q24.22	NA	NA	NA	NA	rs2293979	0.46	0.46	0.498	0.486222	0.3777	0.2827	0.3199	0.8956	0.3722	0.4	0.25	0.37	0.87	0.4191	0.87	0.23	T	0.0	B	0.0	B	0.311	N	1.000	P	-0.69	N	0.76	T	-1.000	T	0.000	T	0.02	0.523	6.833	-9.57	-2.791	-2.791	2.765	0.5229	NA	0.21	0.424884	0.818429	NA	0.594	NA	9.1116494
741	12	121605355	121605355	G	A	exonic	P2RX7	NA	nonsynonymous SNV	P2RX7:NM_002562:exon8:c.G809A:p.R270H	exonic	ENSG00000089041	NA	nonsynonymous SNV	ENSG00000089041:ENST00000328963:exon7:c.G299A:p.R100H,ENSG00000089041:ENST00000546057:exon8:c.G809A:p.R270H,ENSG00000089041:ENST00000535250:exon9:c.G539A:p.R180H	NA	NA	12q24.31	NA	NA	Name=37	NA	rs7958311	0.29	0.29	0.273	0.255791	0.2296	0.3958	0.2968	0.2708	0.089	0.23	0.41	0.29	0.23	0.2448	0.41	0.66	T	0.984	D	0.607	P	0.057	N	1.000	P	1.435	L	3.67	T	-0.972	T	0.000	T	0.466	2.343	13.79	0.975	0.124	0.757	5.665	2.342889	2.342889	0.18	0.247442	0.239219	ID=COSM147626;OCCURENCE=1(stomach)	0.196	NA	9.1114914
741	1	109391662	109391662	G	C	exonic	AKNAD1	NA	nonsynonymous SNV	AKNAD1:NM_152763:exon4:c.C1054G:p.L352V	exonic	ENSG00000162641	NA	nonsynonymous SNV	ENSG00000162641:ENST00000357393:exon3:c.C175G:p.L59V,ENSG00000162641:ENST00000369994:exon3:c.C1054G:p.L352V,ENSG00000162641:ENST00000369995:exon4:c.C1054G:p.L352V,ENSG00000162641:ENST00000370001:exon4:c.C1054G:p.L352V,ENSG00000162641:ENST00000461774:exon4:c.C1054G:p.L352V,ENSG00000162641:ENST00000472781:exon4:c.C1054G:p.L352V,ENSG00000162641:ENST00000474186:exon5:c.C1054G:p.L352V	NA	NA	1p13.3	NA	NA	Name=5	NA	rs11580913	0.06	0.06	0.06	0.0621006	0.0676	NA	0.0519	0.1452	0.0153	0.07	NA	0.06	0.13	0.0709	0.14	0.31	T	0.797	P	0.48	P	0.824	N	1.000	N	0.46	N	1.64	T	-1.049	T	0.017	T	0.029	0.495	6.686	-1.53	0.044	-0.297	1.999	0.495208	NA	0.2	0.083721	0.141171	NA	0.022	NA	9.1111124
741	8	22053778	22053778	G	A	intronic	BMP1	NA	NA	NA	exonic	ENSG00000168487	NA	nonsynonymous SNV	ENSG00000168487:ENST00000397814:exon14:c.G1850A:p.G617E,ENSG00000168487:ENST00000471755:exon14:c.G1850A:p.G617E	NA	NA	8p21.3	NA	NA	NA	NA	rs79619458	0.01	0.01	0.017	0.0141773	0.0298	NA	0.0144	0.003	0.0276	0.02	NA	0.02	0.01	0.0149	0.02	0	D	.	.	.	.	.	.	1.000	N	.	.	1.14	T	-0.989	T	0.031	T	0.055	1.134	9.62	-4.95	-1.145	-0.104	0.071	1.133609	NA	0	0.011301	0.002854	NA	NA	NA	9.1106657
741	10	30316208	30316208	T	C	exonic	KIAA1462	NA	nonsynonymous SNV	KIAA1462:NM_020848:exon3:c.A2869G:p.R957G	exonic	ENSG00000165757	NA	nonsynonymous SNV	ENSG00000165757:ENST00000375377:exon3:c.A2869G:p.R957G	NA	NA	10p11.23	NA	Name=USF-1,c-Myc,CTCF_(C-20),CTCF_(SC-5916),GATA-2,CTCF,Rad21,E2F6_(H-50)	Name=65	NA	rs2185724	0.37	0.37	0.404	0.337061	0.4334	0.3036	0.2968	0.3691	0.2577	0.42	0.31	0.35	0.38	0.3733	0.42	0.24	T	0.01	B	0.009	B	0.736	N	1.000	P	0.11	N	2.6	T	-0.954	T	0.000	T	0.031	1.705	11.66	-11.2	-3.245	-0.378	5.851	1.705407	1.705407	0.29	0.417637	0.380546	ID=COSM427458;OCCURENCE=1(breast)	0.348	NA	9.1089964
741	1	24447468	24447468	G	C	exonic	IL22RA1	NA	nonsynonymous SNV	IL22RA1:NM_021258:exon7:c.C1552G:p.R518G	exonic	ENSG00000142677	NA	nonsynonymous SNV	ENSG00000142677:ENST00000270800:exon7:c.C1552G:p.R518G	NA	NA	1p36.11	NA	NA	NA	NA	rs3795299	0.44	0.44	0.447	0.466254	0.3996	0.7252	0.4035	0.2874	0.5542	0.38	0.71	0.35	0.28	0.4174	0.71	0.32	T	0.178	B	0.039	B	0.248	N	1.000	P	0	N	3.11	T	-0.974	T	0.000	T	0.094	0.687	7.672	4.24	1.394	1.837	11.300	0.68723	NA	0.22	0.407791	0.303904	NA	0.362	NA	9.1085424
741	11	1782594	1782594	G	A	exonic	CTSD	NA	nonsynonymous SNV	CTSD:NM_001909:exon2:c.C173T:p.A58V	exonic	ENSG00000117984	NA	nonsynonymous SNV	ENSG00000117984:ENST00000438213:exon1:c.C128T:p.A43V,ENSG00000117984:ENST00000236671:exon2:c.C173T:p.A58V,ENSG00000117984:ENST00000367196:exon2:c.C68T:p.A23V,ENSG00000117984:ENST00000433655:exon2:c.C173T:p.A58V	NA	NA	11p15.5	NA	NA	NA	NA	rs17571	0.05	0.05	0.05	0.0553115	0.0736	0.0367	0.0533	0.0204	0.1043	0.08	0.03	0.07	0.03	0.0704	0.081	0.61	T	0.177	B	0.03	B	0.011	N	1.000	P	0.325	N	0.74	T	-1.129	T	0.005	T	0.189	0.807	8.24	-1.74	-0.459	1.678	1.395	0.806716	NA	0.52	0.081065	0.031789	NA	0.043	CLINSIG=probable-non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000116853.2|RCV000124633.1;CLNDSDB=.|.;CLNDSDBID=.|.	9.1082684
741	19	57089050	57089050	C	T	exonic	ZNF470	NA	nonsynonymous SNV	ZNF470:NM_001001668:exon6:c.C1253T:p.T418I	exonic	ENSG00000197016	NA	nonsynonymous SNV	ENSG00000197016:ENST00000391709:exon5:c.C1253T:p.T418I,ENSG00000197016:ENST00000330619:exon6:c.C1253T:p.T418I	Score=445;Name=lod=86	NA	19q13.43	NA	Name=KAP1,SETDB1,ZNF274	Name=6	NA	rs4801177	0.77	0.77	0.779	0.772165	0.7584	0.6815	0.696	0.9516	0.6912	0.74	0.67	0.75	0.94	0.7313	0.94	1	T	0.0	B	0.0	B	.	.	1.000	P	0.045	N	2.66	T	-0.963	T	0.000	T	0.035	-2.259	0.004	4.26	0.686	-0.120	8.935	-2.258914	NA	1	0.735465	0.925329	ID=COSM1180616;OCCURENCE=1(upper_aerodigestive_tract)	0.804	NA	9.1081684
741	12	6711147	6711147	C	A	exonic	CHD4	NA	nonsynonymous SNV	CHD4:NM_001273:exon4:c.G417T:p.E139D	exonic	ENSG00000111642	NA	nonsynonymous SNV	ENSG00000111642:ENST00000309577:exon4:c.G417T:p.E139D,ENSG00000111642:ENST00000357008:exon4:c.G417T:p.E139D,ENSG00000111642:ENST00000544040:exon4:c.G396T:p.E132D,ENSG00000111642:ENST00000544484:exon4:c.G408T:p.E136D,ENSG00000111642:ENST00000545942:exon4:c.G417T:p.E139D	NA	NA	12p13.31	NA	NA	NA	NA	rs1639122	0.53	0.53	0.52	0.553115	0.4066	0.4821	0.3617	0.9009	0.4427	0.42	0.45	0.42	0.88	0.4118	0.88	1	T	0.0	B	0.0	B	0.014	N	0.997	P	-0.06	N	0.95	T	-0.910	T	0.000	T	0.082	-1.472	0.018	-8.15	-2.141	-2.782	2.379	-1.471809	NA	1	0.407191	0.825571	ID=COSM1363777,COSM1363776,COSM1363775;OCCURENCE=1(large_intestine)	0.507	NA	9.1077424
741	21	46057393	46057393	T	A	exonic	KRTAP10-10	NA	nonsynonymous SNV	KRTAP10-10:NM_181688:exon1:c.T59A:p.V20D	exonic	ENSG00000221859	NA	nonsynonymous SNV	ENSG00000221859:ENST00000380095:exon1:c.T59A:p.V20D	Score=475;Name=lod=114	NA	21q22.3	Score=849;Name=V$OLF1_01	NA	NA	NA	rs2838602	0.76	0.76	0.742	0.781749	0.7694	0.6468	0.745	0.9183	0.7751	0.77	0.62	0.77	0.92	0.7493	0.92	1	T	0.0	B	0.0	B	.	.	0.000	P	-2.21	N	4.18	T	-1.038	T	0.000	T	0.113	-2.111	0.006	3.52	0.357	0.966	3.110	-2.111369	NA	1	0.707093	0.884249	NA	0.406	NA	9.1075404
741	11	60718792	60718792	C	T	exonic	SLC15A3	NA	nonsynonymous SNV	SLC15A3:NM_016582:exon1:c.G232A:p.V78I	exonic	ENSG00000110446	NA	nonsynonymous SNV	ENSG00000110446:ENST00000227880:exon1:c.G232A:p.V78I,ENSG00000110446:ENST00000541505:exon1:c.G232A:p.V78I	NA	NA	11q12.2	NA	Name=Max,Pol2,TAF1,Egr-1,Pol2-4H8	Name=15	NA	rs150370599	0.03	0.03	0.037	0.0251597	0.0746	NA	0.0461	0.0038	0.0143	0.06	NA	0.05	0.01	0.0903	0.062	0.54	T	0.028	B	0.023	B	0.311	N	1.000	N	0.605	N	0.36	T	-1.074	T	0.011	T	0.016	0.611	7.293	-0.932	-0.301	0.184	10.505	0.611444	NA	0.71	0.061813	0.011221	NA	NA	NA	9.1066204
741	9	138439806	138439806	C	T	exonic	OBP2A	NA	nonsynonymous SNV	OBP2A:NM_014582:exon4:c.C367T:p.R123C	exonic	ENSG00000122136	NA	nonsynonymous SNV	ENSG00000122136:ENST00000342114:exon3:c.C233T:p.A78V,ENSG00000122136:ENST00000537747:exon3:c.C233T:p.A78V,ENSG00000122136:ENST00000340780:exon4:c.C367T:p.R123C,ENSG00000122136:ENST00000371776:exon4:c.C367T:p.R123C,ENSG00000122136:ENST00000471886:exon4:c.C367T:p.R123C,ENSG00000122136:ENST00000539850:exon4:c.C367T:p.R123C	NA	NA	9q34.3	NA	NA	NA	NA	rs72766543	0.16	0.16	0.142	0.146565	0.2515	0.1567	0.1326	0.0303	0.1953	0.25	0.14	0.17	0.03	0.2138	0.26	0.27	T	0.917	P	0.308	B	0.264	N	1.000	P	0	N	2.97	T	-1.024	T	0.000	T	0.143	0.527	6.857	-2.08	-0.438	-3.799	2.138	0.527344	NA	0.18	0.262093	0.065365	NA	0.188	NA	9.1059404
741	12	11183286	11183286	G	C	exonic	TAS2R31	NA	nonsynonymous SNV	TAS2R31:NM_176885:exon1:c.C649G:p.Q217E	exonic	ENSG00000256436	NA	nonsynonymous SNV	ENSG00000256436:ENST00000390675:exon1:c.C649G:p.Q217E	NA	NA	12p13.2	NA	NA	NA	NA	rs10845294	0.16	0.16	0.119	0.122604	0.2734	NA	0.2161	0.1051	0.0511	0.28	NA	0.21	0.14	0.1975	0.28	0.01	D	0.736	P	0.445	B	.	.	1.000	P	2.47	M	5.78	T	-0.939	T	0.000	T	0.081	1.42	10.69	-1.26	-0.006	0.317	3.007	1.420493	1.420493	NA	0.256631	0.133908	NA	0.036	NA	9.1058024
741	1	29475341	29475341	C	T	exonic	SRSF4	NA	nonsynonymous SNV	SRSF4:NM_005626:exon6:c.G1066A:p.G356S	exonic	ENSG00000116350	NA	nonsynonymous SNV	ENSG00000116350:ENST00000373795:exon6:c.G1066A:p.G356S	Score=487;Name=lod=127	NA	1p35.3	Score=901;Name=V$NRF2_01	NA	NA	NA	rs2230678	0.52	0.52	0.526	0.495008	0.7694	0.1528	0.5447	0.5598	0.4427	0.77	0.15	0.56	0.56	0.6603	0.8	0.65	T	0.008	B	0.003	B	0.963	N	0.000	P	0.69	N	3.77	T	-1.052	T	0.000	T	0.036	1.015	9.148	3.76	0.730	1.246	9.548	1.015494	NA	0.6	0.797929	0.609673	NA	0.543	NA	9.1057044
742	1	170934394	170934394	T	C	exonic	MROH9	NA	nonsynonymous SNV	MROH9:NM_001163629:exon7:c.T478C:p.Y160H,MROH9:NM_025063:exon7:c.T478C:p.Y160H	exonic	ENSG00000117501	NA	nonsynonymous SNV	ENSG00000117501:ENST00000367758:exon7:c.T478C:p.Y160H,ENSG00000117501:ENST00000367759:exon7:c.T478C:p.Y160H	NA	NA	1q24.3	Score=825;Name=V$E4BP4_01	NA	NA	NA	rs16863872	0.04	0.04	0.035	0.0357428	0.0825	NA	0.0476	0.0015	0.0624	0.08	NA	0.06	0.0041	0.0637	0.084	0.5	T	0.051	B	0.037	B	0.277	N	1.000	P	1.87	L	2.54	T	-1.091	T	0.060	T	0.061	-0.127	3.376	-2.97	-0.153	-0.653	1.789	-0.127423	NA	0.41	0.083757	0.01596	NA	0.029	NA	9.1033764
742	19	17361116	17361116	G	A	exonic	USHBP1	NA	nonsynonymous SNV	USHBP1:NM_031941:exon13:c.C2030T:p.A677V	exonic	ENSG00000130307	NA	nonsynonymous SNV	ENSG00000130307:ENST00000431146:exon12:c.C1838T:p.A613V,ENSG00000130307:ENST00000252597:exon13:c.C2030T:p.A677V	NA	NA	19p13.11	NA	NA	NA	NA	rs1043963	0.04	0.04	0.039	0.0317492	0.0785	0.0069	0.0403	0.0053	0.0389	0.08	0.01	0.05	0.0041	0.0661	0.086	0.27	T	0.989	D	0.413	B	0.223	N	1.000	D	1.7	L	2.14	T	-1.068	T	0.002	T	0.202	1.426	10.71	1.68	0.884	0.501	8.681	1.425532	1.425532	0.14	0.086047	0.01793	NA	0.101	NA	9.1026864
742	2	198363504	198363504	A	G	exonic	HSPD1	NA	synonymous SNV	HSPD1:NM_002156:exon2:c.T69C:p.T23T,HSPD1:NM_199440:exon2:c.T69C:p.T23T	exonic	ENSG00000144381	NA	synonymous SNV	ENSG00000144381:ENST00000345042:exon2:c.T69C:p.T23T,ENSG00000144381:ENST00000388968:exon2:c.T69C:p.T23T,ENSG00000144381:ENST00000426480:exon2:c.T195C:p.T65T,ENSG00000144381:ENST00000430176:exon2:c.T69C:p.T23T,ENSG00000144381:ENST00000440114:exon2:c.T69C:p.T23T,ENSG00000144381:ENST00000452200:exon2:c.T69C:p.T23T,ENSG00000144381:ENST00000544407:exon2:c.T69C:p.T23T,ENSG00000144381:ENST00000418022:exon3:c.T69C:p.T23T,ENSG00000144381:ENST00000428204:exon3:c.T69C:p.T23T,ENSG00000144381:ENST00000439605:exon3:c.T69C:p.T23T	Score=566;Name=lod=265	NA	2q33.1	Score=875;Name=V$NF1_Q6	Name=Pol2-4H8,NRSF	NA	NA	rs1050347	0.19	0.19	0.17	0.158147	0.2117	0.2282	0.1744	0.1029	0.0941	0.2	0.24	0.18	0.11	0.1643	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.542087	1.542087	NA	0.191395	0.111666	NA	0.123	CLINSIG=probable-non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000117242.2|RCV000125390.1;CLNDSDB=.|.;CLNDSDBID=.|.	9.0992716
742	17	42953409	42953409	A	G	exonic	EFTUD2	NA	synonymous SNV	EFTUD2:NM_001142605:exon9:c.T657C:p.T219T,EFTUD2:NM_001258353:exon10:c.T762C:p.T254T,EFTUD2:NM_001258354:exon10:c.T732C:p.T244T,EFTUD2:NM_004247:exon10:c.T762C:p.T254T	exonic	ENSG00000108883	NA	synonymous SNV	ENSG00000108883:ENST00000402521:exon9:c.T657C:p.T219T,ENSG00000108883:ENST00000426333:exon10:c.T762C:p.T254T,ENSG00000108883:ENST00000591382:exon10:c.T762C:p.T254T,ENSG00000108883:ENST00000592576:exon10:c.T732C:p.T244T	Score=596;Name=lod=351	NA	17q21.31	Score=904;Name=V$AP1FJ_Q2	NA	Name=2	NA	rs2289674	0.18	0.18	0.171	0.170527	0.1958	0.1369	0.121	0.2526	0.1033	0.19	0.13	0.13	0.27	0.1743	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.139501	NA	NA	0.19814	0.261235	NA	0.21	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116955.2;CLNDSDB=.;CLNDSDBID=.	9.0984266
742	17	44828931	44828931	G	A	exonic	NSF	NA	synonymous SNV	NSF:NM_006178:exon19:c.G2106A:p.K702K	exonic	ENSG00000073969	NA	synonymous SNV	ENSG00000073969:ENST00000576346:exon6:c.G390A:p.K130K,ENSG00000073969:ENST00000225282:exon18:c.G1824A:p.K608K,ENSG00000073969:ENST00000575068:exon18:c.G2091A:p.K697K,ENSG00000073969:ENST00000398238:exon19:c.G2106A:p.K702K	Score=563;Name=lod=260	Name=Parkinson's disease	17q21.31	Score=786;Name=V$COMP1_01	NA	Name=3	NA	rs199533	0.11	0.11	0.098	0.0790735	0.2227	0.001	0.1513	0.0106	0.0532	0.22	0.0017	0.18	0.02	0.1357	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.951922	NA	NA	0.210285	0.037765	NA	0.051	NA	9.0979816
742	19	55671374	55671374	C	T	exonic	DNAAF3	NA	synonymous SNV	DNAAF3:NM_001256714:exon10:c.G1257A:p.P419P,DNAAF3:NM_001256715:exon10:c.G1056A:p.P352P,DNAAF3:NM_001256716:exon10:c.G894A:p.P298P,DNAAF3:NM_178837:exon10:c.G1197A:p.P399P	exonic	ENSG00000167646,ENSG00000267110	NA	synonymous SNV	ENSG00000167646:ENST00000455045:exon8:c.G894A:p.P298P,ENSG00000167646:ENST00000391720:exon10:c.G1197A:p.P399P,ENSG00000167646:ENST00000524407:exon10:c.G1056A:p.P352P,ENSG00000167646:ENST00000527223:exon10:c.G1257A:p.P419P	NA	NA	19q13.42	NA	NA	NA	NA	rs891187	0.29	0.29	0.286	0.331869	0.175	0.2361	0.1744	0.6407	0.2863	0.17	0.22	0.19	0.64	0.2266	0.64	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.097	T	0.000	T	.	2.053	12.82	-8.56	-3.114	-2.852	10.391	2.053034	2.053034	NA	0.16829	0.562265	NA	0.181	NA	9.0967766
742	22	35802661	35802661	C	G	exonic	MCM5	NA	nonsynonymous SNV	MCM5:NM_006739:exon5:c.C539G:p.T180S	exonic	ENSG00000100297	NA	nonsynonymous SNV	ENSG00000100297:ENST00000444778:exon3:c.C110G:p.T37S,ENSG00000100297:ENST00000382011:exon4:c.C410G:p.T137S,ENSG00000100297:ENST00000216122:exon5:c.C539G:p.T180S,ENSG00000100297:ENST00000416905:exon6:c.C635G:p.T212S	Score=591;Name=lod=335	NA	22q12.3	NA	NA	Name=2	NA	rs2307340	0.04	0.04	0.043	0.0415335	0.0855	0.006	0.0288	0.0234	0.0665	0.08	0.01	0.02	0.03	0.0658	0.086	0.68	T	0.0	B	0.001	B	0.134	N	0.994	N	0.115	N	3.58	T	-0.897	T	0.000	T	0.238	0.244	5.317	0.199	0.397	-0.180	8.332	0.24383	NA	0.48	0.085465	0.027463	NA	0.036	NA	9.0965684
742	12	9316773	9316773	T	C	exonic	PZP	NA	nonsynonymous SNV	PZP:NM_002864:exon20:c.A2570G:p.N857S	exonic	ENSG00000126838	NA	nonsynonymous SNV	ENSG00000126838:ENST00000261336:exon20:c.A2570G:p.N857S	NA	NA	12p13.31	NA	NA	NA	NA	rs3213831	0.39	0.39	0.385	0.403554	0.3966	0.4187	0.3646	0.3858	0.4468	0.39	0.42	0.38	0.37	0.4108	0.43	0.06	T	0.949	P	0.607	P	0.007	N	0.711	P	2.14	M	1.41	T	-0.939	T	0.000	T	0.083	1.702	11.65	1.37	0.156	2.556	6.336	1.701569	1.701569	0.04	0.429767	0.417612	NA	0.377	NA	9.0961664
742	13	73349359	73349359	G	C	exonic	DIS3	NA	nonsynonymous SNV	DIS3:NM_001128226:exon6:c.C887G:p.T296R,DIS3:NM_014953:exon6:c.C977G:p.T326R	exonic	ENSG00000083520	NA	nonsynonymous SNV	ENSG00000083520:ENST00000377767:exon6:c.C977G:p.T326R,ENSG00000083520:ENST00000377780:exon6:c.C887G:p.T296R,ENSG00000083520:ENST00000490646:exon6:c.C977G:p.T326R,ENSG00000083520:ENST00000545453:exon7:c.C491G:p.T164R	Score=462;Name=lod=101	NA	13q22.1	NA	NA	NA	NA	rs7332388	0.43	0.43	0.446	0.432708	0.4215	0.2946	0.2839	0.7005	0.3303	0.4	0.32	0.31	0.7	0.4007	0.7	0.52	T	0.0	B	0.001	B	0.689	N	1.000	P	0.205	N	0.87	T	-0.959	T	0.000	T	0.113	0.654	7.51	-3.74	-1.012	0.304	8.482	0.654453	NA	0.58	0.415116	0.677258	NA	0.428	NA	9.0960174
742	19	49398405	49398405	C	T	exonic	TULP2	NA	nonsynonymous SNV	TULP2:NM_003323:exon6:c.G364A:p.G122S	exonic	ENSG00000104804	NA	nonsynonymous SNV	ENSG00000104804:ENST00000520977:exon4:c.G307A:p.G103S,ENSG00000104804:ENST00000518572:exon5:c.G226A:p.G76S,ENSG00000104804:ENST00000221399:exon6:c.G364A:p.G122S,ENSG00000104804:ENST00000522945:exon6:c.G355A:p.G119S	NA	NA	19q13.33	NA	NA	NA	NA	rs34378208	0.05	0.05	0.045	0.0519169	0.0805	0.002	0.0648	0.0113	0.1196	0.09	0.0017	0.07	0.01	0.0778	0.09	0.46	T	0.028	B	0.007	B	0.000	N	1.000	N	0	N	2.11	T	-0.996	T	0.014	T	0.188	1.486	10.91	-3.78	-0.814	-3.132	2.385	1.48551	1.48551	0.08	0.08	0.019746	NA	0.022	NA	9.0950334
743	13	20425911	20425911	C	A	exonic	ZMYM5	NA	nonsynonymous SNV	ZMYM5:NM_001039649:exon3:c.G410T:p.C137F,ZMYM5:NM_001039650:exon3:c.G410T:p.C137F,ZMYM5:NM_001142684:exon3:c.G410T:p.C137F	exonic	ENSG00000132950	NA	nonsynonymous SNV	ENSG00000132950:ENST00000502168:exon1:c.G380T:p.C127F,ENSG00000132950:ENST00000337963:exon3:c.G410T:p.C137F,ENSG00000132950:ENST00000382905:exon3:c.G410T:p.C137F,ENSG00000132950:ENST00000382907:exon3:c.G410T:p.C137F	Score=734;Name=lod=1283	NA	13q12.11	NA	NA	NA	NA	rs9579717	0.09	0.09	0.07	0.096845	0.0924	0.0813	0.0735	0.1672	0.0389	0.08	0.06	0.07	0.14	0.0791	0.16	0.06	T	0.113	B	0.092	B	.	.	1.000	P	0.69	N	1.57	T	-1.011	T	0.000	T	0.147	0.386	6.095	-2.22	-0.623	0.643	5.878	0.385875	NA	0.04	0.068256	0.159101	NA	0.167	NA	9.0935774
743	13	20413021	20413021	T	C	exonic	ZMYM5	NA	nonsynonymous SNV	ZMYM5:NM_001039650:exon5:c.A691G:p.T231A,ZMYM5:NM_001142684:exon5:c.A691G:p.T231A	exonic	ENSG00000132950	NA	nonsynonymous SNV	ENSG00000132950:ENST00000502168:exon3:c.A661G:p.T221A,ENSG00000132950:ENST00000337963:exon5:c.A691G:p.T231A,ENSG00000132950:ENST00000382905:exon5:c.A691G:p.T231A	Score=464;Name=lod=103	NA	13q12.11	NA	Name=GATA-1	NA	NA	rs41292167	0.09	0.09	0.087	0.0972444	0.0924	0.0813	0.0735	0.1687	0.0389	0.08	0.06	0.07	0.14	0.0787	0.16	0.14	T	0.048	B	0.014	B	0.004	N	0.000	P	0.69	N	1.01	T	-1.076	T	0.000	T	0.104	2.005	12.66	-0.334	0.073	0.848	4.843	2.004845	2.004845	0.06	0.068721	0.159328	NA	0.167	NA	9.0935124
743	13	20425948	20425948	T	C	exonic	ZMYM5	NA	nonsynonymous SNV	ZMYM5:NM_001039649:exon3:c.A373G:p.I125V,ZMYM5:NM_001039650:exon3:c.A373G:p.I125V,ZMYM5:NM_001142684:exon3:c.A373G:p.I125V	exonic	ENSG00000132950	NA	nonsynonymous SNV	ENSG00000132950:ENST00000502168:exon1:c.A343G:p.I115V,ENSG00000132950:ENST00000337963:exon3:c.A373G:p.I125V,ENSG00000132950:ENST00000382905:exon3:c.A373G:p.I125V,ENSG00000132950:ENST00000382907:exon3:c.A373G:p.I125V	Score=541;Name=lod=210	NA	13q12.11	Score=728;Name=V$HOX13_01	NA	NA	NA	rs9579718	0.09	0.09	0.075	0.0980431	0.0924	0.0813	0.0735	0.1717	0.0389	0.08	0.06	0.07	0.14	0.0789	0.16	0.15	T	0.047	B	0.02	B	.	.	1.000	P	1.24	L	1.54	T	-1.041	T	0.000	T	0.062	0.31	5.678	0.098	-0.036	-0.078	4.809	0.309723	NA	0.2	0.068605	0.160917	NA	0.167	NA	9.0934284
743	11	102576382	102576382	G	A	exonic	MMP27	NA	nonsynonymous SNV	MMP27:NM_022122:exon1:c.C64T:p.R22W	exonic	ENSG00000137675	NA	nonsynonymous SNV	ENSG00000137675:ENST00000260229:exon1:c.C64T:p.R22W	NA	NA	11q22.2	NA	NA	NA	NA	rs12099177	0.16	0.16	0.138	0.16853	0.0666	0.2996	0.1455	0.1687	0.1544	0.06	0.28	0.12	0.19	0.11	0.28	0.02	D	0.058	B	0.029	B	0.505	U	1.000	P	0.805	L	1.25	T	-0.986	T	0.000	T	0.125	1.429	10.72	0.533	0.330	1.091	3.919	1.429129	1.429129	0.03	0.063968	0.16818	ID=COSM147312;OCCURENCE=1(stomach)	0.261	NA	9.0927654
743	10	90433345	90433345	T	A	exonic	LIPF	NA	nonsynonymous SNV	LIPF:NM_001198828:exon7:c.T571A:p.F191I,LIPF:NM_004190:exon7:c.T670A:p.F224I,LIPF:NM_001198829:exon8:c.T700A:p.F234I,LIPF:NM_001198830:exon8:c.T601A:p.F201I	exonic	ENSG00000182333	NA	nonsynonymous SNV	ENSG00000182333:ENST00000238983:exon7:c.T670A:p.F224I,ENSG00000182333:ENST00000355843:exon8:c.T571A:p.F191I,ENSG00000182333:ENST00000394375:exon8:c.T700A:p.F234I	NA	NA	10q23.31	NA	NA	NA	NA	rs6586145	0.12	0.12	0.108	0.133586	0.0626	0.1419	0.0793	0.2753	0.045	0.06	0.11	0.1	0.23	0.097	0.24	.	.	0.0	B	0.0	B	0.076	N	1.000	P	-0.695	N	-0.5	T	-1.116	T	0.000	T	0.07	2.032	12.75	-10.6	-3.715	-3.313	6.728	2.031527	2.031527	0.35	0.08155	0.24455	NA	0.152	NA	9.0921834
743	6	109827716	109827716	C	T	exonic	AK9	NA	nonsynonymous SNV	AK9:NM_001145128:exon35:c.G4663A:p.V1555I	exonic	ENSG00000155085	NA	nonsynonymous SNV	ENSG00000155085:ENST00000424296:exon35:c.G4663A:p.V1555I	Score=363;Name=lod=40	NA	6q21	NA	Name=CEBPB	NA	NA	rs2277114	0.4	0.4	0.396	0.380391	0.4105	0.378	0.4092	0.2814	0.4652	0.41	0.45	0.4	0.3	0.4475	0.45	.	.	0.0	B	0.0	B	.	.	0.000	P	-1.04	N	-1.14	T	-1.079	T	0.044	T	0.115	-0.041	3.803	0.879	0.269	1.754	1.774	-0.041245	NA	0.7	0.384035	0.288295	NA	0.348	NA	9.0912984
743	2	101609827	101609827	C	T	exonic	NPAS2	NA	synonymous SNV	NPAS2:NM_002518:exon20:c.C2130T:p.T710T	exonic	ENSG00000170485	NA	nonsynonymous SNV	ENSG00000170485:ENST00000450763:exon5:c.C445T:p.R149C	NA	NA	2q11.2	NA	NA	NA	NA	rs9223	0.25	0.25	0.24	0.252796	0.3002	0.2192	0.304	0.0832	0.4315	0.31	0.26	0.34	0.09	0.299	0.34	.	.	.	.	.	.	.	.	1.000	P	.	.	1.52	T	-0.966	T	0.000	T	.	1.584	11.25	-8.78	-1.815	-1.203	1.636	1.584424	1.584424	0.09	0.310465	0.121425	NA	0.167	NA	9.090335
743	6	21065450	21065450	A	G	exonic	CDKAL1	NA	synonymous SNV	CDKAL1:NM_017774:exon12:c.A1227G:p.P409P	exonic	ENSG00000145996	NA	synonymous SNV	ENSG00000145996:ENST00000378610:exon10:c.A1227G:p.P409P,ENSG00000145996:ENST00000378624:exon11:c.A1017G:p.P339P,ENSG00000145996:ENST00000274695:exon12:c.A1227G:p.P409P	Score=704;Name=lod=969	NA	6p22.3	Score=834;Name=V$GRE_C	Name=GATA-2	Name=64	NA	rs56087852	0.16	0.16	0.18	0.187899	0.1998	0.1627	0.1369	0.239	0.1687	0.19	0.12	0.11	0.2	0.1878	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.235829	1.235829	NA	0.189884	0.218566	ID=COSM150057;OCCURENCE=1(stomach)	0.254	NA	9.0891826
743	1	222713621	222713621	C	T	exonic	HHIPL2	NA	nonsynonymous SNV	HHIPL2:NM_024746:exon4:c.G1181A:p.R394Q	exonic	ENSG00000143512	NA	nonsynonymous SNV	ENSG00000143512:ENST00000343410:exon4:c.G1181A:p.R394Q	Score=355;Name=lod=37	NA	1q41	Score=815;Name=V$GRE_C	NA	NA	NA	rs3748665	0.09	0.09	0.095	0.0856629	0.0924	0.0446	0.0778	0.1619	0.0235	0.1	0.05	0.09	0.14	0.0691	0.14	0.54	T	0.064	B	0.015	B	0.073	N	0.933	P	0.065	N	2.7	T	-0.941	T	0.000	T	0.039	0.665	7.562	1.79	0.382	0.082	4.863	0.664969	NA	0.38	0.082907	0.14503	NA	0.072	NA	9.0889264
743	6	31122315	31122315	G	C	exonic	CCHCR1	NA	nonsynonymous SNV	CCHCR1:NM_001105563:exon4:c.C651G:p.S217R,CCHCR1:NM_001105564:exon4:c.C759G:p.S253R,CCHCR1:NM_019052:exon4:c.C492G:p.S164R	exonic	ENSG00000204536	NA	nonsynonymous SNV	ENSG00000204536:ENST00000513222:exon3:c.C414G:p.S138R,ENSG00000204536:ENST00000376266:exon4:c.C492G:p.S164R,ENSG00000204536:ENST00000396263:exon4:c.C492G:p.S164R,ENSG00000204536:ENST00000396268:exon4:c.C759G:p.S253R,ENSG00000204536:ENST00000448141:exon4:c.C384G:p.S128R,ENSG00000204536:ENST00000448162:exon4:c.C492G:p.S164R,ENSG00000204536:ENST00000451521:exon4:c.C651G:p.S217R,ENSG00000204536:ENST00000508683:exon4:c.C384G:p.S128R	Score=489;Name=lod=129	NA	6p21.33	NA	NA	NA	NA	rs130066	0.39	0.39	0.386	0.394169	0.4115	0.3839	0.4697	0.3449	0.3998	0.42	0.34	0.46	0.37	0.4058	0.46	0.54	T	0.008	B	0.01	B	0.252	N	1.000	P	1.445	L	3.89	T	-0.929	T	0.004	T	0.306	1.172	9.768	3.49	0.596	2.837	7.248	1.171833	NA	0.65	0.428756	0.377483	ID=COSM1443230,COSM1443231;OCCURENCE=1(large_intestine)	0.42	NA	9.0872774
743	9	79324179	79324179	G	A	exonic	PRUNE2	NA	nonsynonymous SNV	PRUNE2:NM_015225:exon8:c.C3011T:p.T1004M	exonic	ENSG00000106772	NA	nonsynonymous SNV	ENSG00000106772:ENST00000376718:exon8:c.C3011T:p.T1004M,ENSG00000106772:ENST00000428286:exon8:c.C1934T:p.T645M	NA	NA	9q21.2	NA	Name=BATF	Name=2	NA	rs530978	0.45	0.45	0.387	0.431709	0.5885	0.3591	0.634	0.1952	0.5215	0.58	0.37	0.63	0.22	0.5525	0.63	0.21	T	0.943	P	0.367	B	0.246	N	1.000	P	0.55	N	0.95	T	-0.947	T	0.000	T	0.171	2.753	15.17	2.98	0.857	0.447	5.200	2.75254	2.75254	0.27	0.605109	0.272321	NA	0.464	NA	9.0872244
743	1	222713501	222713501	C	A	exonic	HHIPL2	NA	nonsynonymous SNV	HHIPL2:NM_024746:exon4:c.G1301T:p.R434L	exonic	ENSG00000143512	NA	nonsynonymous SNV	ENSG00000143512:ENST00000343410:exon4:c.G1301T:p.R434L	NA	NA	1q41	Score=823;Name=V$PAX3_01,V$PAX2_01	NA	NA	NA	rs3748663	0.09	0.09	0.105	0.086262	0.0934	0.0446	0.0778	0.1634	0.0235	0.1	0.05	0.09	0.14	0.0699	0.15	0.21	T	0.173	B	0.231	B	0.833	N	1.000	P	1.15	L	2.5	T	-0.936	T	0.000	T	0.113	0.91	8.702	-5.87	-0.768	-0.510	9.509	0.909983	NA	0.12	0.08314	0.148434	NA	0.072	NA	9.0868934
743	19	49658209	49658209	A	C	exonic	HRC	NA	nonsynonymous SNV	HRC:NM_002152:exon1:c.T286G:p.S96A	exonic	ENSG00000130528	NA	nonsynonymous SNV	ENSG00000130528:ENST00000252825:exon1:c.T286G:p.S96A,ENSG00000130528:ENST00000595625:exon1:c.T286G:p.S96A	NA	NA	19q13.33	Score=850;Name=V$IK3_01	NA	NA	NA	rs3745297	0.35	0.35	0.311	0.350839	0.4085	0.254	0.438	0.2769	0.4294	0.4	0.26	0.49	0.29	0.4053	0.49	0.24	T	0.037	B	0.023	B	.	.	1.000	P	2.25	M	3.29	T	-0.982	T	0.000	T	0.115	1.295	10.24	0.693	0.069	1.643	6.294	1.295323	1.295323	0.21	0.432791	0.292329	NA	0.326	NA	9.0867424
743	17	7462969	7462969	A	G	exonic	TNFSF12-TNFSF13,TNFSF13	NA	nonsynonymous SNV	TNFSF13:NM_003808:exon2:c.A287G:p.N96S,TNFSF13:NM_172087:exon2:c.A287G:p.N96S,TNFSF13:NM_172088:exon2:c.A287G:p.N96S,TNFSF12-TNFSF13:NM_172089:exon7:c.A527G:p.N176S	exonic	ENSG00000161955,ENSG00000239697,ENSG00000248871	NA	nonsynonymous SNV	ENSG00000161955:ENST00000338784:exon2:c.A287G:p.N96S,ENSG00000161955:ENST00000349228:exon2:c.A287G:p.N96S,ENSG00000161955:ENST00000396545:exon2:c.A287G:p.N96S,ENSG00000161955:ENST00000436057:exon3:c.A236G:p.N79S,ENSG00000161955:ENST00000438470:exon3:c.A236G:p.N79S,ENSG00000248871:ENST00000293826:exon7:c.A527G:p.N176S,ENSG00000239697:ENST00000557233:exon7:c.A527G:p.N176S	Score=300;Name=lod=22	Name=Non-albumin protein levels,IgA nephropathy,IgA levels	17p13.1	NA	NA	NA	NA	rs3803800	0.63	0.63	0.608	0.559704	0.7674	0.6498	0.585	0.2663	0.6319	0.78	0.67	0.7	0.29	0.6949	0.78	1	T	0.036	B	0.03	B	0.977	N	0.000	P	1.61	L	1.49	T	-0.902	T	0.000	T	0.024	1.491	10.94	2.35	0.366	1.119	6.091	1.491471	1.491471	0.19	0.784767	0.37744	NA	0.674	NA	9.0862664
743	1	32672908	32672908	T	G	exonic	IQCC	NA	nonsynonymous SNV	IQCC:NM_001160042:exon5:c.T866G:p.F289C,IQCC:NM_018134:exon5:c.T626G:p.F209C	exonic	ENSG00000160051	NA	nonsynonymous SNV	ENSG00000160051:ENST00000291358:exon5:c.T626G:p.F209C,ENSG00000160051:ENST00000537469:exon5:c.T866G:p.F289C	NA	NA	1p35.1	NA	NA	NA	NA	rs3903683	0.17	0.17	0.173	0.227436	0.0567	0.2302	0.2378	0.3056	0.2873	0.06	0.22	0.15	0.31	0.1264	0.31	1	T	0.0	B	0.0	B	0.091	N	1.000	P	-0.975	N	3.11	T	-0.929	T	0.000	T	0.068	-1.607	0.013	2.32	0.305	1.192	2.932	-1.607113	NA	NA	0.065116	0.291648	NA	0.21	NA	9.0851174
744	17	25628820	25628820	T	C	exonic	WSB1	NA	nonsynonymous SNV	WSB1:NM_015626:exon2:c.T47C:p.L16S	exonic	ENSG00000109046	NA	nonsynonymous SNV	ENSG00000109046:ENST00000262394:exon2:c.T47C:p.L16S,ENSG00000109046:ENST00000581185:exon2:c.T47C:p.L16S,ENSG00000109046:ENST00000581440:exon2:c.T68C:p.L23S,ENSG00000109046:ENST00000582208:exon2:c.T47C:p.L16S	Score=638;Name=lod=521	NA	17q11.1	NA	NA	NA	NA	rs6561	0.41	0.41	0.413	0.45607	0.3887	0.2609	0.3718	0.649	0.5256	0.39	0.25	0.38	0.67	0.4372	0.67	0.32	T	0.0	B	0.0	B	0.010	N	0.000	P	-0.69	N	1.16	T	-0.989	T	0.000	T	0.5	0.4	6.173	4.87	0.824	5.174	11.824	0.400188	NA	0.93	0.424186	0.624603	NA	0.478	NA	9.0832474
744	13	25466955	25466955	T	C	exonic	CENPJ	NA	synonymous SNV	CENPJ:NM_018451:exon10:c.A3042G:p.E1014E	exonic	ENSG00000151849	NA	synonymous SNV	ENSG00000151849:ENST00000381884:exon10:c.A3042G:p.E1014E,ENSG00000151849:ENST00000545981:exon10:c.A3042G:p.E1014E	Score=478;Name=lod=117	NA	13q12.12	Score=809;Name=V$EVI1_04	NA	NA	NA	rs3742165	0.51	0.51	0.474	0.484026	0.507	0.7024	0.5836	0.2436	0.4898	0.53	0.69	0.55	0.23	0.5395	0.69	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.946	T	0.000	T	.	0.896	8.641	4.02	2.106	0.181	8.185	0.896043	NA	NA	0.537209	0.285293	NA	0.341	NA	9.0829576
744	6	56417282	56417282	C	T	exonic	DST	NA	nonsynonymous SNV	DST:NM_015548:exon42:c.G8439A:p.M2813I,DST:NM_183380:exon52:c.G9417A:p.M3139I,DST:NM_001144770:exon53:c.G9537A:p.M3179I,DST:NM_001144769:exon55:c.G9951A:p.M3317I	exonic	ENSG00000151914	NA	nonsynonymous SNV	ENSG00000151914:ENST00000244364:exon42:c.G8439A:p.M2813I,ENSG00000151914:ENST00000446842:exon48:c.G14703A:p.M4901I,ENSG00000151914:ENST00000370788:exon52:c.G9417A:p.M3139I,ENSG00000151914:ENST00000421834:exon52:c.G9417A:p.M3139I,ENSG00000151914:ENST00000361203:exon57:c.G15675A:p.M5225I,ENSG00000151914:ENST00000370769:exon58:c.G15681A:p.M5227I,ENSG00000151914:ENST00000370754:exon61:c.G16215A:p.M5405I	NA	NA	6p12.1	NA	Name=p300	Name=18	NA	rs4715630	0.81	0.81	0.803	0.791534	0.7485	0.7887	0.7608	0.9319	0.6708	0.76	0.8	0.74	0.94	0.7601	0.94	0.31	T	0.0	B	0.001	B	0.001	N	1.000	P	-1.05	N	1.38	T	-0.997	T	0.007	T	0.127	1	9.084	-8.74	-1.759	-0.393	5.241	0.999945	NA	0.07	0.742325	0.908098	NA	0.819	NA	9.0824084
744	1	18149510	18149510	G	T	exonic	ACTL8	NA	nonsynonymous SNV	ACTL8:NM_030812:exon2:c.G7T:p.A3S	exonic	ENSG00000117148	NA	nonsynonymous SNV	ENSG00000117148:ENST00000375406:exon2:c.G7T:p.A3S	NA	NA	1p36.13	NA	NA	NA	NA	rs694214	0.35	0.35	0.321	0.305711	0.4374	0.4315	0.3228	0.143	0.2485	0.46	0.41	0.27	0.15	0.3921	0.46	0	D	0.004	B	0.008	B	0.426	N	1.000	P	0.55	N	-3.46	D	-1.017	T	0.000	T	0.073	2.049	12.81	-3.42	-0.699	-0.019	3.746	2.048776	2.048776	0.06	0.421977	0.202451	NA	0.254	NA	9.0818564
744	18	43534824	43534824	T	C	exonic	EPG5	NA	nonsynonymous SNV	EPG5:NM_020964:exon2:c.A544G:p.K182E	exonic	ENSG00000152223	NA	nonsynonymous SNV	ENSG00000152223:ENST00000282041:exon2:c.A544G:p.K182E	NA	NA	18q21.1	NA	NA	NA	NA	rs59422275	0.1	0.1	0.094	0.11262	0.0815	0.0268	0.0692	0.2466	0.0828	0.08	0.02	0.06	0.24	0.0874	0.24	1	T	0.001	B	0.002	B	0.078	N	1.000	P	-0.345	N	2.84	T	-0.967	T	0.000	T	0.089	0.286	5.546	2.73	0.280	1.089	6.386	0.28568	NA	0.53	0.083232	0.203425	NA	0.094	NA	9.0812014
744	16	10769958	10769958	T	C	exonic	TEKT5	NA	nonsynonymous SNV	TEKT5:NM_144674:exon5:c.A944G:p.Q315R	exonic	ENSG00000153060	NA	nonsynonymous SNV	ENSG00000153060:ENST00000576638:exon4:c.A263G:p.Q88R,ENSG00000153060:ENST00000283025:exon5:c.A944G:p.Q315R	Score=583;Name=lod=312	NA	16p13.13	NA	NA	NA	NA	rs2719710	0.58	0.58	0.555	0.634185	0.3588	0.8135	0.6009	0.6944	0.6748	0.38	0.82	0.53	0.67	0.5002	0.82	0.46	T	0.001	B	0.009	B	0.005	N	1.000	P	-0.215	N	4.26	T	-1.097	T	0.000	T	0.26	1.245	10.05	2.67	0.521	1.681	6.495	1.245159	1.245159	0.37	0.393256	0.653619	NA	0.674	NA	9.0810774
744	2	224862842	224862842	A	G	exonic	SERPINE2	NA	synonymous SNV	SERPINE2:NM_001136528:exon3:c.T477C:p.N159N,SERPINE2:NM_001136530:exon3:c.T513C:p.N171N,SERPINE2:NM_006216:exon3:c.T477C:p.N159N	exonic	ENSG00000135919	NA	synonymous SNV	ENSG00000135919:ENST00000258405:exon3:c.T477C:p.N159N,ENSG00000135919:ENST00000409304:exon3:c.T477C:p.N159N,ENSG00000135919:ENST00000447280:exon3:c.T513C:p.N171N,ENSG00000135919:ENST00000409840:exon4:c.T477C:p.N159N,ENSG00000135919:ENST00000432738:exon4:c.T477C:p.N159N	Score=432;Name=lod=76	NA	2q36.1	Score=839;Name=V$IRF1_01	Name=HNF4A_(H-171),JunD,HDAC2_(SC-6296),HNF4A,SP1,HNF4G_(SC-6558),CEBPB,RXRA,p300	Name=29	NA	rs12457	0.25	0.25	0.254	0.253994	0.1909	0.129	0.2161	0.4826	0.1656	0.18	0.13	0.24	0.48	0.2038	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.682343	NA	NA	0.195233	0.444167	NA	0.239	NA	9.0767336
744	3	197432036	197432036	C	T	exonic	KIAA0226	NA	nonsynonymous SNV	KIAA0226:NM_001145642:exon3:c.G50A:p.R17H,KIAA0226:NM_014687:exon3:c.G230A:p.R77H	exonic	ENSG00000145016	NA	nonsynonymous SNV	ENSG00000145016:ENST00000273582:exon3:c.G50A:p.R17H,ENSG00000145016:ENST00000296343:exon3:c.G230A:p.R77H,ENSG00000145016:ENST00000389665:exon3:c.G230A:p.R77H,ENSG00000145016:ENST00000449205:exon3:c.G230A:p.R77H	Score=548;Name=lod=225	NA	3q29	NA	NA	NA	NA	rs61743568	0.07	0.07	0.069	0.0656949	0.0984	NA	0.0403	0.1188	0.046	0.1	NA	0.04	0.12	0.0718	0.12	0.15	T	0.169	B	0.018	B	0.084	N	0.422	P	0.69	N	2.67	T	-1.007	T	0.000	T	0.209	2.638	14.78	-1.51	-0.170	0.195	11.570	2.637975	2.637975	0.01	0.086644	0.108276	NA	0.138	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117387.2;CLNDSDB=.;CLNDSDBID=.	9.0764894
744	6	150210685	150210685	C	T	exonic	RAET1E	NA	nonsynonymous SNV	RAET1E:NM_001243325:exon3:c.G313A:p.A105T,RAET1E:NM_001243327:exon3:c.G421A:p.A141T,RAET1E:NM_139165:exon3:c.G421A:p.A141T,RAET1E:NM_001243328:exon4:c.G421A:p.A141T	exonic	ENSG00000164520	NA	nonsynonymous SNV	ENSG00000164520:ENST00000357183:exon3:c.G421A:p.A141T,ENSG00000164520:ENST00000367363:exon3:c.G313A:p.A105T,ENSG00000164520:ENST00000529948:exon3:c.G421A:p.A141T,ENSG00000164520:ENST00000532335:exon4:c.G421A:p.A141T	NA	NA	6q25.1	NA	Name=p300_(N-15),GTF2F1_(RAP-74),CEBPB,TBP,STAT3,Pol2(phosphoS2),Pol2,c-Jun,JunD	Name=19	NA	rs9383921	0.5	0.5	0.455	0.469249	0.4175	0.8859	0.487	0.1747	0.4785	0.41	0.87	0.49	0.2	0.4392	0.87	0.21	T	0.064	B	0.008	B	0.586	N	1.000	P	0.145	N	2.55	T	-1.061	T	0.029	T	0.066	0.004	4.036	-2.12	-0.380	-0.522	3.570	0.004177	NA	0.4	0.400581	0.205402	NA	0.536	NA	9.0760524
744	17	79803101	79803101	A	G	exonic	P4HB	NA	synonymous SNV	P4HB:NM_000918:exon10:c.T1365C:p.I455I	exonic	ENSG00000185624	NA	synonymous SNV	ENSG00000185624:ENST00000571617:exon4:c.T336C:p.I112I,ENSG00000185624:ENST00000439918:exon9:c.T1233C:p.I411I,ENSG00000185624:ENST00000331483:exon10:c.T1365C:p.I455I	NA	NA	17q25.3	Score=843;Name=V$HNF1_01	NA	NA	NA	rs1130674	0.28	0.28	0.288	0.250998	0.173	0.2857	0.3184	0.3555	0.1063	0.18	0.34	0.28	0.37	0.2225	0.37	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	0.449	6.436	-6.65	-1.621	-0.470	13.455	0.448536	NA	NA	0.195743	0.323797	NA	0.261	NA	9.0754236
745	16	5128817	5128817	G	A	exonic	ALG1	NA	nonsynonymous SNV	ALG1:NM_019109:exon7:c.G800A:p.S267N	exonic	ENSG00000033011	NA	nonsynonymous SNV	ENSG00000033011:ENST00000262374:exon7:c.G800A:p.S267N,ENSG00000033011:ENST00000544428:exon7:c.G467A:p.S156N,ENSG00000033011:ENST00000591783:exon7:c.G467A:p.S156N,ENSG00000033011:ENST00000588623:exon8:c.G467A:p.S156N	NA	NA	16p13.3	Score=781;Name=V$PAX5_02	NA	NA	NA	rs17849848	0.1	0.1	0.073	0.0726837	0.0815	0.128	0.1571	0.0061	0.0368	0.1	0.14	0.14	0.01	0.0917	0.14	0.73	T	0.003	B	0.007	B	0.007	N	1.000	P	1.395	L	-1.07	T	-1.045	T	0.003	T	0.044	0.844	8.409	3.29	0.585	0.415	7.594	0.84364	NA	NA	0.085272	0.013655	NA	0.058	NA	9.0748614
745	19	39915637	39915637	G	A	exonic	PLEKHG2	NA	synonymous SNV	PLEKHG2:NM_022835:exon19:c.G3864A:p.Q1288Q	exonic	ENSG00000090924	NA	synonymous SNV	ENSG00000090924:ENST00000425673:exon17:c.G3777A:p.Q1259Q,ENSG00000090924:ENST00000409794:exon19:c.G3864A:p.Q1288Q	Score=448;Name=lod=88	NA	19q13.2	NA	NA	NA	NA	rs31727	0.56	0.56	0.565	0.596845	0.5358	0.5962	0.5086	0.6762	0.6155	0.53	0.55	0.51	0.65	0.5511	0.66	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.925	T	0.000	T	.	0.995	9.065	4.1	1.175	2.675	9.778	0.995379	NA	NA	0.506629	0.65842	NA	0.486	NA	9.0731376
745	13	20411701	20411701	C	T	exonic	ZMYM5	NA	nonsynonymous SNV	ZMYM5:NM_001039650:exon6:c.G1133A:p.R378H	exonic	ENSG00000132950	NA	nonsynonymous SNV	ENSG00000132950:ENST00000382905:exon6:c.G1133A:p.R378H	NA	NA	13q12.11	NA	NA	NA	NA	rs7988277	0.1	0.1	0.102	0.117212	0.0984	0.0813	0.0836	0.211	0.0706	0.09	0.06	0.08	0.17	0.0897	0.2	0	D	0.0	B	0.0	B	.	.	1.000	P	.	.	1.78	T	-1.012	T	0.000	T	0.024	1.022	9.174	-2.1	-0.881	-0.438	5.751	1.021882	NA	0	0.073193	0.196453	NA	0.174	NA	9.0720404
745	5	149212243	149212243	G	C	exonic	PPARGC1B	NA	nonsynonymous SNV	PPARGC1B:NM_001172698:exon4:c.G490C:p.A164P,PPARGC1B:NM_001172699:exon4:c.G415C:p.A139P,PPARGC1B:NM_133263:exon5:c.G607C:p.A203P	exonic	ENSG00000155846	NA	nonsynonymous SNV	ENSG00000155846:ENST00000360453:exon4:c.G490C:p.A164P,ENSG00000155846:ENST00000403750:exon4:c.G415C:p.A139P,ENSG00000155846:ENST00000309241:exon5:c.G607C:p.A203P,ENSG00000155846:ENST00000394320:exon5:c.G607C:p.A203P	NA	NA	5q32	NA	NA	NA	NA	rs7732671	0.1	0.1	0.095	0.109625	0.0825	0.0625	0.1427	0.1793	0.0685	0.08	0.06	0.15	0.16	0.0962	0.17	0.55	T	0.007	B	0.015	B	0.858	N	1.000	P	0.55	N	2.96	T	-0.914	T	0.000	T	0.092	-1.101	0.142	-4.26	-0.413	-0.005	1.270	-1.100846	NA	0.26	0.08407	0.16069	NA	0.123	CLINSIG=pathogenic;CLNDBN=Obesity\x2c_variation_in;CLNREVSTAT=single;CLNACC=RCV000002119.1;CLNDSDB=.;CLNDSDBID=.	9.0705634
745	1	229772932	229772932	A	G	exonic	URB2	NA	nonsynonymous SNV	URB2:NM_014777:exon4:c.A2572G:p.K858E	exonic	ENSG00000135763	NA	nonsynonymous SNV	ENSG00000135763:ENST00000258243:exon4:c.A2572G:p.K858E	NA	NA	1q42.13	NA	NA	NA	NA	rs3811474	0.22	0.22	0.211	0.199281	0.0636	0.4315	0.2421	0.1952	0.0746	0.06	0.47	0.21	0.2	0.1354	0.47	.	.	0.055	B	0.032	B	0.178	N	1.000	P	0.895	L	1.54	T	-0.913	T	0.000	T	0.091	0.651	7.495	2.59	0.831	2.475	2.453	0.651409	NA	NA	0.064302	0.191557	NA	0.203	NA	9.0700314
745	14	39716808	39716808	T	C	exonic	MIA2	NA	nonsynonymous SNV	MIA2:NM_054024:exon4:c.T1030C:p.S344P	exonic	ENSG00000150526,ENSG00000258941	NA	nonsynonymous SNV	ENSG00000150526:ENST00000280082:exon4:c.T1030C:p.S344P,ENSG00000258941:ENST00000553728:exon4:c.T1030C:p.S344P,ENSG00000150526:ENST00000556784:exon4:c.T1027C:p.S343P	NA	NA	14q21.1	Score=888;Name=V$IK3_01	NA	NA	NA	rs3825549	0.07	0.07	0.067	0.0782748	0.0915	0.0774	0.062	0.0129	0.1656	0.1	0.08	0.07	0.02	0.0895	0.1	.	.	0.005	B	0.005	B	0.023	N	1.000	N	1.525	L	3.17	T	-1.103	T	0.002	T	0.119	2.522	14.39	-2.64	-0.038	0.129	0.599	2.52185	2.52185	0.27	0.083721	0.026555	NA	0.101	NA	9.0686124
746	8	95877787	95877787	T	C	exonic	INTS8	NA	synonymous SNV	INTS8:NM_017864:exon17:c.T2130C:p.S710S	exonic	ENSG00000164941	NA	synonymous SNV	ENSG00000164941:ENST00000520315:exon3:c.T192C:p.S64S,ENSG00000164941:ENST00000343161:exon17:c.T2130C:p.S710S,ENSG00000164941:ENST00000447247:exon17:c.T2130C:p.S710S,ENSG00000164941:ENST00000523731:exon17:c.T2130C:p.S710S	Score=700;Name=lod=934	NA	8q22.1	NA	Name=MafK_(ab50322)	NA	NA	rs713113	0.56	0.56	0.557	0.566693	0.5388	0.6607	0.6182	0.4531	0.6155	0.53	0.63	0.64	0.47	0.5499	0.64	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.917	T	0.000	T	.	1.278	10.18	3.81	1.989	0.095	6.430	1.27845	1.27845	NA	0.51407	0.49478	NA	0.551	NA	9.0638966
746	11	43702530	43702530	A	G	exonic	HSD17B12	NA	synonymous SNV	HSD17B12:NM_016142:exon1:c.A153G:p.E51E	exonic	ENSG00000149084	NA	synonymous SNV	ENSG00000149084:ENST00000278353:exon1:c.A153G:p.E51E,ENSG00000149084:ENST00000395700:exon1:c.A153G:p.E51E,ENSG00000149084:ENST00000531185:exon1:c.A153G:p.E51E	Score=468;Name=lod=106	NA	11p11.2	Score=871;Name=V$YY1_01	Name=Pol2(b),NFKB,Pol2	Name=88	NA	rs56168061	0.12	0.12	0.11	0.102037	0.1938	0.001	0.1066	0.0817	0.136	0.21	0.0017	0.12	0.1	0.195	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.499706	NA	NA	0.214402	0.090764	ID=COSM428975;OCCURENCE=1(breast)	0.232	NA	9.0634646
746	5	141307833	141307833	T	C	exonic	KIAA0141	NA	nonsynonymous SNV	KIAA0141:NM_001142603:exon4:c.T382C:p.F128L,KIAA0141:NM_014773:exon4:c.T382C:p.F128L	exonic	ENSG00000081791	NA	nonsynonymous SNV	ENSG00000081791:ENST00000194118:exon4:c.T382C:p.F128L,ENSG00000081791:ENST00000432126:exon4:c.T382C:p.F128L,ENSG00000081791:ENST00000508751:exon4:c.T382C:p.F128L	NA	NA	5q31.3	NA	NA	NA	NA	rs10036567	0.13	0.13	0.148	0.157548	0.0865	0.0099	0.0749	0.3835	0.136	0.08	0.01	0.09	0.39	0.1025	0.39	1	T	0.0	B	0.0	B	0.025	N	1.000	P	-1.935	N	2.96	T	-0.927	T	0.000	T	0.022	-0.236	2.862	4.75	0.856	1.118	9.481	-0.235939	NA	1	0.083953	0.327962	NA	0.145	NA	9.0603804
746	16	89627671	89627671	C	T	exonic	RPL13	NA	synonymous SNV	RPL13:NM_033251:exon2:c.C141T:p.A47A,RPL13:NM_000977:exon3:c.C141T:p.A47A,RPL13:NM_001243130:exon3:c.C141T:p.A47A,RPL13:NM_001243131:exon3:c.C141T:p.A47A	exonic	ENSG00000167526	NA	synonymous SNV	ENSG00000167526:ENST00000393099:exon2:c.C141T:p.A47A,ENSG00000167526:ENST00000311528:exon3:c.C141T:p.A47A,ENSG00000167526:ENST00000452368:exon3:c.C141T:p.A47A,ENSG00000167526:ENST00000467736:exon3:c.C141T:p.A47A,ENSG00000167526:ENST00000567815:exon3:c.C141T:p.A47A	Score=431;Name=lod=75	NA	16q24.3	Score=949;Name=V$GATA1_01	Name=Pol2,CTCF	Name=19	NA	rs174035	0.15	0.15	0.163	0.14377	0.1839	0.13	0.1282	0.1256	0.1524	0.19	0.14	0.13	0.14	0.2621	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.489844	2.489844	NA	0.161267	0.114508	NA	0.087	NA	9.0593996
746	8	144996029	144996029	A	G	exonic	PLEC	NA	nonsynonymous SNV	PLEC:NM_201378:exon32:c.T7918C:p.S2640P,PLEC:NM_201379:exon32:c.T7894C:p.S2632P,PLEC:NM_201380:exon32:c.T8371C:p.S2791P,PLEC:NM_201381:exon32:c.T7864C:p.S2622P,PLEC:NM_201382:exon32:c.T7960C:p.S2654P,PLEC:NM_201383:exon32:c.T7972C:p.S2658P,PLEC:NM_201384:exon32:c.T7960C:p.S2654P,PLEC:NM_000445:exon33:c.T8041C:p.S2681P	exonic	ENSG00000178209	NA	nonsynonymous SNV	ENSG00000178209:ENST00000322810:exon32:c.T8371C:p.S2791P,ENSG00000178209:ENST00000345136:exon32:c.T7960C:p.S2654P,ENSG00000178209:ENST00000354589:exon32:c.T7960C:p.S2654P,ENSG00000178209:ENST00000354958:exon32:c.T7894C:p.S2632P,ENSG00000178209:ENST00000356346:exon32:c.T7918C:p.S2640P,ENSG00000178209:ENST00000357649:exon32:c.T7972C:p.S2658P,ENSG00000178209:ENST00000398774:exon32:c.T7864C:p.S2622P,ENSG00000178209:ENST00000527096:exon32:c.T8029C:p.S2677P,ENSG00000178209:ENST00000436759:exon33:c.T8041C:p.S2681P	Score=336;Name=lod=31	NA	8q24.3	NA	Name=Pol2	NA	NA	rs7833924	0.45	0.45	0.472	0.466653	0.4354	0.1429	0.3674	0.8775	0.3476	0.43	0.16	0.38	0.86	0.4085	0.86	1	T	0.0	B	0.0	B	0.000	N	0.997	P	-0.05	N	-0.43	T	-0.943	T	0.000	T	0.051	1.156	9.708	1.26	0.147	0.441	3.695	1.156295	NA	1	0.430891	0.825954	ID=COSM454186,COSM454187,COSM1489102;OCCURENCE=3(breast)	0.522	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000078898.3;CLNDSDB=.;CLNDSDBID=.	9.0585424
747	17	10355763	10355763	T	C	exonic	MYH4	NA	nonsynonymous SNV	MYH4:NM_017533:exon26:c.A3318G:p.I1106M	exonic	ENSG00000264424	NA	nonsynonymous SNV	ENSG00000264424:ENST00000255381:exon26:c.A3318G:p.I1106M	Score=385;Name=lod=49	NA	17p13.1	NA	NA	NA	NA	rs917361	0.52	0.52	0.504	0.533946	0.3698	0.8631	0.5187	0.3442	0.6309	0.37	0.87	0.5	0.33	0.493	0.87	0.22	T	0.0	B	0.003	B	0.000	N	1.000	P	-0.425	N	-1.67	D	-0.964	T	0.000	T	0.037	0.572	7.093	4.63	0.854	-0.314	4.116	0.57248	NA	NA	0.41593	0.359737	NA	0.594	NA	9.0546034
747	19	9048895	9048895	A	C	exonic	MUC16	NA	nonsynonymous SNV	MUC16:NM_024690:exon5:c.T32736G:p.S10912R	exonic	ENSG00000181143	NA	nonsynonymous SNV	ENSG00000181143:ENST00000397910:exon5:c.T32736G:p.S10912R	NA	NA	19p13.2	NA	NA	NA	NA	rs2012761	0.16	0.16	0.136	0.159345	0.0865	0.2619	0.1801	0.1415	0.138	0.09	0.29	0.15	0.11	0.1154	0.29	0	D	0.112	B	0.031	B	.	.	.	.	1.955	M	4.21	T	-0.929	T	0.000	T	0.034	0.692	7.695	-1.16	-0.365	0.433	2.343	0.691851	NA	0.05	0.077603	0.134716	NA	0.138	NA	9.0538304
747	17	1183354	1183354	T	C	exonic	TUSC5	NA	nonsynonymous SNV	TUSC5:NM_172367:exon1:c.T59C:p.F20S	exonic	ENSG00000184811	NA	nonsynonymous SNV	ENSG00000184811:ENST00000333813:exon1:c.T59C:p.F20S	Score=333;Name=lod=30	NA	17p13.3	NA	NA	NA	NA	rs6502774	0.84	0.84	0.844	0.849042	0.7435	0.8819	0.8876	0.9244	0.7945	0.73	0.9	0.86	0.93	0.7904	0.93	0.36	T	0.0	B	0.0	B	0.000	U	1.000	P	0	N	-0.44	T	-0.988	T	0.000	T	0.084	3.225	16.81	5.22	1.247	2.666	10.057	3.22547	3.22547	0.33	0.746508	0.898279	NA	0.804	NA	9.0529254
747	5	140739779	140739779	C	G	exonic	PCDHGB2	NA	nonsynonymous SNV	PCDHGB2:NM_018923:exon1:c.C77G:p.P26R,PCDHGB2:NM_032096:exon1:c.C77G:p.P26R	exonic	ENSG00000253910	NA	nonsynonymous SNV	ENSG00000253910:ENST00000522605:exon1:c.C77G:p.P26R	NA	NA	5q31.3	NA	NA	Name=2	NA	rs17097231	0.12	0.12	0.101	0.130391	0.0706	0.119	0.1671	0.1573	0.1411	0.08	0.12	0.15	0.14	0.1205	0.15	0.36	T	0.0	B	0.0	B	.	.	1.000	P	0	N	0.77	T	-1.055	T	0.000	T	0.06	-1.174	0.087	2.45	0.694	0.942	8.483	-1.173915	NA	NA	0.089787	0.14607	NA	0.109	NA	9.0524464
747	8	141310644	141310644	G	A	exonic	TRAPPC9	NA	synonymous SNV	TRAPPC9:NM_001160372:exon11:c.C1692T:p.N564N,TRAPPC9:NM_031466:exon11:c.C1986T:p.N662N	exonic	ENSG00000167632	NA	synonymous SNV	ENSG00000167632:ENST00000389327:exon10:c.C1665T:p.N555N,ENSG00000167632:ENST00000389328:exon11:c.C1986T:p.N662N,ENSG00000167632:ENST00000438773:exon11:c.C1692T:p.N564N	Score=533;Name=lod=196	NA	8q24.3	NA	NA	NA	NA	rs12549048	0.33	0.33	0.294	0.355831	0.172	0.6171	0.4006	0.2443	0.3947	0.17	0.57	0.38	0.24	0.2676	0.57	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.911	T	0.000	T	.	1.079	9.404	3.87	0.748	0.202	4.524	1.078845	NA	NA	0.176279	0.229233	NA	0.355	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118668.2;CLNDSDB=.;CLNDSDBID=.	9.0507876
747	6	150209717	150209717	C	G	exonic	RAET1E	NA	nonsynonymous SNV	RAET1E:NM_001243325:exon4:c.G601C:p.V201L,RAET1E:NM_139165:exon4:c.G709C:p.V237L	exonic	ENSG00000164520	NA	nonsynonymous SNV	ENSG00000164520:ENST00000357183:exon4:c.G709C:p.V237L,ENSG00000164520:ENST00000367363:exon4:c.G601C:p.V201L	NA	NA	6q25.1	NA	NA	NA	NA	rs2342767	0.55	0.55	0.539	0.546126	0.4195	0.8859	0.5043	0.4554	0.4785	0.41	0.87	0.51	0.43	0.4631	0.87	0.07	T	0.066	B	0.058	B	0.018	N	1.000	P	0.55	N	5.2	T	-0.918	T	0.001	T	0.235	0.419	6.278	-4.24	-1.138	-1.787	1.408	0.419345	NA	0.07	0.40186	0.457331	NA	0.587	NA	9.0488734
747	2	231077676	231077676	G	A	exonic	SP110	NA	nonsynonymous SNV	SP110:NM_004509:exon4:c.C383T:p.A128V,SP110:NM_004510:exon4:c.C383T:p.A128V,SP110:NM_080424:exon4:c.C383T:p.A128V,SP110:NM_001185015:exon5:c.C401T:p.A134V	exonic	ENSG00000135899	NA	nonsynonymous SNV	ENSG00000135899:ENST00000258381:exon4:c.C383T:p.A128V,ENSG00000135899:ENST00000258382:exon4:c.C383T:p.A128V,ENSG00000135899:ENST00000358662:exon4:c.C383T:p.A128V,ENSG00000135899:ENST00000392048:exon4:c.C383T:p.A128V,ENSG00000135899:ENST00000455674:exon4:c.C245T:p.A82V,ENSG00000135899:ENST00000409815:exon5:c.C383T:p.A128V,ENSG00000135899:ENST00000540870:exon5:c.C401T:p.A134V	NA	NA	2q37.1	NA	NA	NA	NA	rs11556887	0.07	0.07	0.061	0.0966454	0.0875	0.0764	0.049	0.0166	0.2689	0.09	0.08	0.07	0.01	0.104	0.094	0.28	T	0.999	D	0.96	D	0.029	N	1.000	N	1.795	L	3.03	T	-1.053	T	0.002	T	0.4	3.013	16.05	-1.09	-0.221	0.122	1.460	3.013296	3.013296	0.01	0.093605	0.027916	ID=COSM149089;OCCURENCE=1(stomach)	0.08	NA	9.0482284
747	3	167506937	167506937	C	G	exonic	SERPINI1	NA	nonsynonymous SNV	SERPINI1:NM_001122752:exon2:c.C21G:p.F7L,SERPINI1:NM_005025:exon2:c.C21G:p.F7L	exonic	ENSG00000163536	NA	nonsynonymous SNV	ENSG00000163536:ENST00000295777:exon2:c.C21G:p.F7L,ENSG00000163536:ENST00000446050:exon2:c.C21G:p.F7L,ENSG00000163536:ENST00000472747:exon2:c.C21G:p.F7L,ENSG00000163536:ENST00000472941:exon2:c.C21G:p.F7L	Score=422;Name=lod=69	NA	3q26.1	NA	NA	NA	NA	rs33917740	0.11	0.11	0.122	0.114217	0.1004	0.0516	0.1542	0.2057	0.0409	0.1	0.06	0.12	0.2	0.0979	0.2	1	T	0.0	B	0.0	B	0.000	N	0.000	P	-1.01	N	-0.98	T	-1.060	T	0.000	T	0.303	-0.801	0.675	1.81	0.572	1.117	10.490	-0.800592	NA	1	0.08814	0.198593	NA	0.116	NA	9.0468934
747	4	123664427	123664427	G	C	exonic	BBS12	NA	synonymous SNV	BBS12:NM_152618:exon2:c.G1380C:p.V460V,BBS12:NM_001178007:exon3:c.G1380C:p.V460V	exonic	ENSG00000181004	NA	synonymous SNV	ENSG00000181004:ENST00000314218:exon2:c.G1380C:p.V460V,ENSG00000181004:ENST00000542236:exon3:c.G1380C:p.V460V	Score=317;Name=lod=26	NA	4q27	Score=863;Name=V$CEBPB_02	Name=GATA-2	Name=4	NA	rs13135766	0.11	0.11	0.101	0.0946486	0.2177	NA	0.1081	0.0484	0.1186	0.22	NA	0.12	0.06	0.1728	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.79714	NA	NA	0.230349	0.066727	NA	0.13	NA	9.0458176
747	1	17586134	17586134	A	G	exonic	PADI3	NA	nonsynonymous SNV	PADI3:NM_016233:exon2:c.A154G:p.I52V	exonic	ENSG00000142619	NA	nonsynonymous SNV	ENSG00000142619:ENST00000375460:exon2:c.A154G:p.I52V	NA	NA	1p36.13	NA	Name=CTCF,AP-2gamma,AP-2alpha	Name=4	NA	rs3750300	0.11	0.11	0.091	0.133986	0.0865	0.1577	0.1354	0.0787	0.2321	0.08	0.16	0.14	0.08	0.1095	0.16	1	T	0.0	B	0.003	B	0.000	N	1.000	P	0.115	N	3.08	T	-0.909	T	0.000	T	0.028	-2.37	0.004	0.158	-0.244	0.026	9.231	-2.370297	NA	1	0.09186	0.083296	NA	0.094	NA	9.0454734
748	8	1616640	1616640	G	A	exonic	DLGAP2	NA	synonymous SNV	DLGAP2:NM_001277161:exon6:c.G1716A:p.P572P,DLGAP2:NM_004745:exon6:c.G1716A:p.P572P	exonic	ENSG00000198010	NA	synonymous SNV	ENSG00000198010:ENST00000421627:exon6:c.G1716A:p.P572P	NA	NA	8p23.3	Score=851;Name=V$ARP1_01	NA	NA	NA	rs4565482	0.09	0.09	0.085	0.0732827	0.1958	0.003	0.0951	0.0106	0.089	0.19	0.0017	0.13	0.01	0.2227	0.2	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.085	T	0.000	T	.	-0.183	3.107	-11.1	-2.726	-3.479	11.144	-0.183454	NA	NA	0.205018	0.038424	ID=COSM1132804,COSM1132803;OCCURENCE=1(prostate)	0.13	NA	9.0431486
748	1	45797505	45797505	C	G	exonic	MUTYH	NA	nonsynonymous SNV	MUTYH:NM_001048171:exon12:c.G972C:p.Q324H,MUTYH:NM_001048172:exon12:c.G933C:p.Q311H,MUTYH:NM_001048173:exon12:c.G930C:p.Q310H,MUTYH:NM_001048174:exon12:c.G930C:p.Q310H,MUTYH:NM_001128425:exon12:c.G1014C:p.Q338H,MUTYH:NM_012222:exon12:c.G1005C:p.Q335H	exonic	ENSG00000132781	NA	nonsynonymous SNV	ENSG00000132781:ENST00000467459:exon4:c.G347C:p.S116T,ENSG00000132781:ENST00000412971:exon7:c.G546C:p.Q182H,ENSG00000132781:ENST00000354383:exon12:c.G933C:p.Q311H,ENSG00000132781:ENST00000355498:exon12:c.G930C:p.Q310H,ENSG00000132781:ENST00000372098:exon12:c.G1005C:p.Q335H,ENSG00000132781:ENST00000372100:exon12:c.G963C:p.Q321H,ENSG00000132781:ENST00000372110:exon12:c.G975C:p.Q325H,ENSG00000132781:ENST00000372115:exon12:c.G972C:p.Q324H,ENSG00000132781:ENST00000448481:exon12:c.G963C:p.Q321H,ENSG00000132781:ENST00000450313:exon12:c.G1014C:p.Q338H,ENSG00000132781:ENST00000456914:exon12:c.G930C:p.Q310H,ENSG00000132781:ENST00000372104:exon13:c.G930C:p.Q310H	NA	NA	1p34.1	NA	NA	NA	NA	rs3219489	0.32	0.32	0.303	0.313498	0.2445	0.3909	0.4841	0.2579	0.2587	0.24	0.42	0.41	0.25	0.2967	0.42	0.14	T	0.645	P	0.18	B	0.038	N	0.000	P	2.125	M	3.23	T	-0.933	T	0.000	T	0.09	-0.39	2.17	1.26	0.240	0.051	2.473	-0.390088	NA	0.15	0.249186	0.263744	NA	0.333	CLINSIG=non-pathogenic|non-pathogenic|non-pathogenic;CLNDBN=not_provided|not_specified|Neoplastic_Syndromes\x2c_Hereditary;CLNREVSTAT=single|single|single;CLNACC=RCV000034684.1|RCV000079500.2|RCV000131427.1;CLNDSDB=.|.|MedGen;CLNDSDBID=.|.|C0027672	9.0429474
748	5	159820931	159820931	C	A	exonic	C5orf54	NA	nonsynonymous SNV	C5orf54:NM_022090:exon2:c.G1567T:p.A523S	exonic	ENSG00000221886	NA	nonsynonymous SNV	ENSG00000221886:ENST00000408953:exon2:c.G1567T:p.A523S,ENSG00000221886:ENST00000523213:exon3:c.G1567T:p.A523S	Score=655;Name=lod=612	Name=Weight loss (gastric bypass surgery)	5q33.3	NA	NA	NA	NA	rs10515808	0.06	0.06	0.062	0.0517173	0.1143	0.001	0.0692	0.0242	0.0644	0.11	0.0017	0.07	0.02	0.0787	0.11	1	T	0.0	B	0.0	B	.	.	1.000	P	-0.805	N	2.04	T	-0.957	T	0.000	T	0.069	-0.705	0.955	1.03	0.261	0.468	5.122	-0.705164	NA	0.8	0.102442	0.039946	NA	0.022	NA	9.0378914
748	18	61160320	61160320	G	C	exonic	SERPINB5	NA	nonsynonymous SNV	SERPINB5:NM_002639:exon5:c.G559C:p.V187L	exonic	ENSG00000206075	NA	nonsynonymous SNV	ENSG00000206075:ENST00000382771:exon5:c.G559C:p.V187L,ENSG00000206075:ENST00000489441:exon5:c.G559C:p.V187L	Score=500;Name=lod=144	NA	18q21.33	NA	NA	Name=9	NA	rs2289520	0.24	0.24	0.264	0.308906	0.0785	0.2222	0.1527	0.6316	0.3098	0.07	0.19	0.12	0.63	0.1515	0.63	0.91	T	0.018	B	0.01	B	0.058	N	0.833	P	0.185	N	2.28	T	-0.961	T	0.000	T	0.091	0.132	4.71	0.338	0.113	0.260	9.332	0.131937	NA	0.66	0.065581	0.540172	NA	0.326	NA	9.0377524
748	2	231077110	231077110	C	T	exonic	SP110	NA	nonsynonymous SNV	SP110:NM_004509:exon5:c.G619A:p.E207K,SP110:NM_004510:exon5:c.G619A:p.E207K,SP110:NM_080424:exon5:c.G619A:p.E207K,SP110:NM_001185015:exon6:c.G637A:p.E213K	exonic	ENSG00000135899	NA	nonsynonymous SNV	ENSG00000135899:ENST00000258381:exon5:c.G619A:p.E207K,ENSG00000135899:ENST00000258382:exon5:c.G619A:p.E207K,ENSG00000135899:ENST00000358662:exon5:c.G619A:p.E207K,ENSG00000135899:ENST00000392048:exon5:c.G619A:p.E207K,ENSG00000135899:ENST00000409815:exon6:c.G619A:p.E207K,ENSG00000135899:ENST00000540870:exon6:c.G637A:p.E213K	NA	NA	2q37.1	NA	NA	NA	NA	rs9061	0.12	0.12	0.099	0.130591	0.0895	0.1726	0.0476	0.0681	0.273	0.09	0.21	0.07	0.08	0.1142	0.21	0.57	T	0.049	B	0.008	B	0.145	N	1.000	P	-0.46	N	2.88	T	-0.952	T	0.000	T	0.448	-0.265	2.728	-4.55	-1.181	-0.451	5.213	-0.265138	NA	0.28	0.093837	0.077621	ID=COSM149088;OCCURENCE=1(stomach)	0.109	NA	9.0357964
748	2	101587455	101587455	C	T	exonic	NPAS2	NA	synonymous SNV	NPAS2:NM_002518:exon12:c.C1059T:p.Y353Y	exonic	ENSG00000170485	NA	synonymous SNV	ENSG00000170485:ENST00000335681:exon12:c.C1059T:p.Y353Y,ENSG00000170485:ENST00000542504:exon12:c.C1254T:p.Y418Y	NA	NA	2q11.2	NA	NA	NA	NA	rs1562313	0.24	0.24	0.233	0.236621	0.2256	0.2808	0.1095	0.3033	0.2025	0.24	0.25	0.12	0.31	0.1978	0.31	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.014	T	0.000	T	.	-1.177	0.085	-8.22	-2.172	-1.204	20.707	-1.177368	NA	NA	0.207791	0.270086	NA	0.181	NA	9.0354756
749	1	236381825	236381825	G	C	exonic	ERO1LB	NA	nonsynonymous SNV	ERO1LB:NM_019891:exon16:c.C1395G:p.H465Q	exonic	ENSG00000086619	NA	nonsynonymous SNV	ENSG00000086619:ENST00000354619:exon16:c.C1395G:p.H465Q	Score=558;Name=lod=248	NA	1q42.3	NA	NA	NA	NA	rs1055851	0.57	0.57	0.55	0.569289	0.4006	0.8839	0.5821	0.4803	0.5297	0.38	0.89	0.58	0.47	0.4961	0.89	0.42	T	0.001	B	0.001	B	0.002	N	0.000	P	-0.205	N	1.57	T	-0.969	T	0.000	T	0.07	1.221	9.953	4.62	2.600	0.371	10.575	1.22076	NA	0.28	0.402126	0.488176	NA	0.529	NA	9.0345074
749	3	27297816	27297816	G	C	exonic	NEK10	NA	synonymous SNV	NEK10:NM_199347:exon24:c.C2061G:p.T687T	exonic	ENSG00000163491	NA	synonymous SNV	ENSG00000163491:ENST00000357467:exon5:c.C252G:p.T84T,ENSG00000163491:ENST00000341435:exon24:c.C2061G:p.T687T,ENSG00000163491:ENST00000429845:exon24:c.C2061G:p.T687T	Score=582;Name=lod=308	NA	3p24.1	NA	NA	NA	NA	rs3213930	0.57	0.57	0.584	0.592452	0.5388	0.2292	0.6138	0.9728	0.4928	0.53	0.22	0.64	0.96	0.5492	0.96	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.096	T	0.000	T	.	0.805	8.233	-6.92	-2.119	-1.914	10.391	0.805083	NA	NA	0.544186	0.896685	ID=COSM1179804,COSM1179803,COSM1179802;OCCURENCE=1(prostate)	0.623	NA	9.0344806
749	8	103573006	103573006	G	A	exonic	ODF1	NA	nonsynonymous SNV	ODF1:NM_024410:exon2:c.G647A:p.S216N	exonic	ENSG00000155087	NA	nonsynonymous SNV	ENSG00000155087:ENST00000285402:exon2:c.G647A:p.S216N,ENSG00000155087:ENST00000518835:exon2:c.G26A:p.S9N	NA	NA	8q22.3	NA	NA	NA	NA	rs2916569	0.55	0.55	0.61	0.542332	0.6481	0.3165	0.5216	0.6233	0.5716	0.65	0.32	0.54	0.67	0.6547	0.67	1	T	0.0	B	0.0	B	0.691	N	1.000	P	0.14	N	1.84	T	-0.979	T	0.000	T	0.025	-1.963	0.007	-7.32	-1.156	-2.159	15.416	-1.962775	NA	0.54	NA	NA	NA	0.58	NA	9.0305334
749	10	123970569	123970569	C	T	exonic	TACC2	NA	nonsynonymous SNV	TACC2:NM_006997:exon3:c.C863T:p.A288V,TACC2:NM_206860:exon3:c.C863T:p.A288V,TACC2:NM_206861:exon6:c.C1067T:p.A356V,TACC2:NM_206862:exon9:c.C6629T:p.A2210V	exonic	ENSG00000138162	NA	nonsynonymous SNV	ENSG00000138162:ENST00000505639:exon1:c.C152T:p.A51V,ENSG00000138162:ENST00000260733:exon3:c.C863T:p.A288V,ENSG00000138162:ENST00000360561:exon3:c.C863T:p.A288V,ENSG00000138162:ENST00000368999:exon3:c.C863T:p.A288V,ENSG00000138162:ENST00000369004:exon3:c.C863T:p.A288V,ENSG00000138162:ENST00000514539:exon3:c.C914T:p.A305V,ENSG00000138162:ENST00000358010:exon5:c.C1067T:p.A356V,ENSG00000138162:ENST00000513429:exon6:c.C1067T:p.A356V,ENSG00000138162:ENST00000453444:exon7:c.C6641T:p.A2214V,ENSG00000138162:ENST00000334433:exon8:c.C6629T:p.A2210V,ENSG00000138162:ENST00000515273:exon8:c.C6641T:p.A2214V,ENSG00000138162:ENST00000515603:exon8:c.C6494T:p.A2165V,ENSG00000138162:ENST00000369005:exon9:c.C6629T:p.A2210V	NA	NA	10q26.13	NA	NA	NA	NA	rs2295874	0.1	0.1	0.089	0.103634	0.0765	0.1161	0.1354	0.0613	0.1534	0.08	0.13	0.12	0.08	0.1156	0.14	0.29	T	0.245	B	0.077	B	0.570	N	0.998	P	1.05	L	4.16	T	-1.001	T	0.000	T	0.263	-0.97	0.307	2.66	0.686	1.792	6.222	-0.969967	NA	0.35	0.113488	0.070746	NA	0.181	NA	9.0277454
749	14	69259662	69259662	C	A	exonic	ZFP36L1	NA	synonymous SNV	ZFP36L1:NM_001244701:exon2:c.G201T:p.T67T	exonic	ENSG00000185650	NA	synonymous SNV	ENSG00000185650:ENST00000553375:exon2:c.G201T:p.T67T	Score=555;Name=lod=241	NA	14q24.1	Score=974;Name=V$TCF11_01	Name=YY1_(C-20),SMC3_(ab9263),Pol2(phosphoS2),Pol2,HMGN3,POU2F2,E2F6_(H-50),ETS1,TAF1,GTF2F1_(RAP-74),Oct-2,Pol2-4H8,Sin3Ak-20,YY1,Ini1,Pol2(b),TBP,TCF12,USF-1,PAX5-C20,NFKB,HEY1,ZEB1_(SC-25388),c-Myc	Name=145	NA	rs1051533	0.19	0.19	0.224	0.203474	0.2127	0.0089	0.1513	0.3888	0.181	0.2	0.01	0.15	0.4	0.2037	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.212618	NA	NA	0.222791	0.359283	NA	0.275	NA	9.0274756
749	5	79025634	79025634	G	A	exonic	CMYA5	NA	nonsynonymous SNV	CMYA5:NM_153610:exon2:c.G1046A:p.G349D	exonic	ENSG00000164309	NA	nonsynonymous SNV	ENSG00000164309:ENST00000446378:exon2:c.G1046A:p.G349D	NA	NA	5q14.1	NA	NA	Name=2	NA	rs1366271	0.24	0.24	0.294	0.234625	0.0815	0.3621	0.072	0.441	0.0971	0.08	0.41	0.07	0.44	0.1392	0.44	1	T	0.0	B	0.0	B	0.246	N	1.000	P	-0.805	N	1.57	T	-0.947	T	0.000	T	0.059	-0.442	1.948	2.82	0.060	0.303	5.989	-0.442042	NA	1	0.085962	0.37289	NA	0.283	NA	9.0266714
749	19	8993018	8993018	G	A	exonic	MUC16	NA	nonsynonymous SNV	MUC16:NM_024690:exon67:c.C41741T:p.P13914L	exonic	ENSG00000181143	NA	nonsynonymous SNV	ENSG00000181143:ENST00000380951:exon19:c.C1664T:p.P555L,ENSG00000181143:ENST00000397910:exon67:c.C41741T:p.P13914L	NA	NA	19p13.2	NA	NA	NA	NA	rs61742668	0.05	0.05	0.047	0.0503195	0.1173	0.001	0.0778	0.0098	0.0675	0.09	NA	0.08	0.01	0.0788	0.11	0.61	T	0.991	D	0.995	D	.	.	.	.	1.875	L	1.63	T	-1.038	T	0.003	T	0.039	1.829	12.07	-1.49	-0.361	0.814	2.795	1.829017	1.829017	NA	0.111958	0.018538	NA	0.051	NA	9.0252754
750	6	32188383	32188383	T	C	exonic	NOTCH4	NA	nonsynonymous SNV	NOTCH4:NM_004557:exon6:c.A958G:p.T320A	exonic	ENSG00000204301	NA	nonsynonymous SNV	ENSG00000204301:ENST00000375023:exon6:c.A958G:p.T320A	NA	NA	6p21.32	NA	NA	NA	NA	rs422951	0.33	0.33	0.33	0.343051	0.4553	0.2212	0.3112	0.2958	0.4397	0.45	0.22	0.35	0.28	0.4035	0.45	0.19	T	0.0	B	0.009	B	0.721	N	0.000	P	0.955	L	-2.98	D	-0.758	T	0.351	T	0.015	-0.596	1.333	-4.96	-1.001	0.081	7.561	-0.596204	NA	0.64	0.449612	0.311714	ID=COSM451253;OCCURENCE=1(breast)	0.493	NA	9.0249214
750	19	44981883	44981883	C	G	exonic	ZNF180	NA	nonsynonymous SNV	ZNF180:NM_013256:exon5:c.G815C:p.C272S	exonic	ENSG00000167384	NA	nonsynonymous SNV	ENSG00000167384:ENST00000391956:exon4:c.G740C:p.C247S,ENSG00000167384:ENST00000221327:exon5:c.G815C:p.C272S,ENSG00000167384:ENST00000592529:exon5:c.G734C:p.C245S	NA	NA	19q13.31	NA	Name=SETDB1	NA	NA	rs1897820	0.45	0.45	0.452	0.434505	0.4583	0.4177	0.2939	0.6218	0.274	0.45	0.45	0.33	0.56	0.4224	0.59	0.2	T	0.0	B	0.0	B	0.098	N	1.000	P	-0.345	N	3.43	T	-1.037	T	0.000	T	0.013	-0.275	2.681	4.2	1.237	0.026	9.886	-0.275458	NA	0.56	0.428688	0.594871	NA	0.493	NA	9.0239454
750	3	111962851	111962851	T	C	exonic	SLC9C1	NA	nonsynonymous SNV	SLC9C1:NM_183061:exon11:c.A1270G:p.T424A	exonic	ENSG00000172139	NA	nonsynonymous SNV	ENSG00000172139:ENST00000487372:exon10:c.A1126G:p.T376A,ENSG00000172139:ENST00000305815:exon11:c.A1270G:p.T424A	Score=378;Name=lod=46	NA	3q13.2	NA	NA	NA	NA	rs6768523	0.31	0.31	0.278	0.32488	0.2376	0.3304	0.3963	0.3427	0.3344	0.24	0.32	0.37	0.34	0.3032	0.37	0.28	T	0.454	P	0.281	B	0.944	N	0.947	P	1.245	L	-1.04	T	-1.068	T	0.000	T	0.046	-0.285	2.635	3.96	0.896	0.071	7.641	-0.285462	NA	0.56	0.270698	0.332501	NA	0.304	NA	9.0218354
750	8	120431506	120431506	G	A	exonic	NOV	NA	nonsynonymous SNV	NOV:NM_002514:exon4:c.G698A:p.R233H	exonic	ENSG00000136999	NA	nonsynonymous SNV	ENSG00000136999:ENST00000259526:exon4:c.G698A:p.R233H	NA	NA	8q24.12	Score=832;Name=V$CDPCR3_01	NA	NA	NA	rs11538929	0.05	0.05	0.05	0.0467252	0.1133	NA	0.0432	0.0159	0.0706	0.11	NA	0.06	0.01	0.0894	0.11	0.08	T	0.048	B	0.02	B	0.028	N	1.000	N	2.325	M	0.72	T	-1.052	T	0.003	T	0.015	2.261	13.52	-0.365	-0.379	-0.219	1.42	2.260816	2.260816	0.06	0.111977	0.030867	NA	0.043	NA	9.0186564
750	5	79027605	79027605	T	C	exonic	CMYA5	NA	nonsynonymous SNV	CMYA5:NM_153610:exon2:c.T3017C:p.V1006A	exonic	ENSG00000164309	NA	nonsynonymous SNV	ENSG00000164309:ENST00000446378:exon2:c.T3017C:p.V1006A	NA	NA	5q14.1	NA	NA	NA	NA	rs6893869	0.29	0.29	0.336	0.273962	0.0815	0.3621	0.085	0.5832	0.0971	0.08	0.41	0.09	0.62	0.1474	0.62	1	T	0.236	B	0.031	B	0.750	N	1.000	P	0.68	N	0.18	T	-0.914	T	0.000	T	0.072	1.065	9.347	3.3	1.005	0.769	2.608	1.064534	NA	0.51	0.086951	0.49584	ID=COSM149866;OCCURENCE=1(stomach)	0.312	NA	9.0174824
750	15	89398631	89398631	T	A	exonic	ACAN	NA	nonsynonymous SNV	ACAN:NM_001135:exon12:c.T2815A:p.S939T,ACAN:NM_013227:exon12:c.T2815A:p.S939T	exonic	ENSG00000157766	NA	nonsynonymous SNV	ENSG00000157766:ENST00000561243:exon11:c.T2815A:p.S939T,ENSG00000157766:ENST00000352105:exon12:c.T2815A:p.S939T,ENSG00000157766:ENST00000439576:exon12:c.T2815A:p.S939T,ENSG00000157766:ENST00000559004:exon12:c.T2815A:p.S939T	NA	NA	15q26.1	NA	NA	NA	NA	rs938609	0.43	0.43	0.414	0.392173	0.6521	0.2073	0.3804	0.3389	0.3957	0.67	0.18	0.46	0.32	0.5172	0.67	0.48	T	0.992	D	0.779	P	.	.	1.000	P	1.955	M	-4.28	D	-0.929	T	0.000	T	0.029	2.678	14.92	1.18	0.018	-0.086	4.250	2.678067	2.678067	0.24	0.647766	0.391956	ID=COSM146362;OCCURENCE=1(stomach)	0.406	NA	9.0162674
750	10	96827030	96827030	C	T	exonic	CYP2C8	NA	nonsynonymous SNV	CYP2C8:NM_001198854:exon2:c.G110A:p.R37K,CYP2C8:NM_000770:exon3:c.G416A:p.R139K,CYP2C8:NM_001198853:exon3:c.G206A:p.R69K,CYP2C8:NM_001198855:exon4:c.G206A:p.R69K	exonic	ENSG00000138115	NA	nonsynonymous SNV	ENSG00000138115:ENST00000535898:exon2:c.G110A:p.R37K,ENSG00000138115:ENST00000539050:exon2:c.G158A:p.R53K,ENSG00000138115:ENST00000371270:exon3:c.G416A:p.R139K,ENSG00000138115:ENST00000527420:exon3:c.G416A:p.R139K	Score=472;Name=lod=110	NA	10q23.33	NA	NA	NA	NA	rs11572080	0.06	0.06	0.049	0.0457268	0.1183	0.001	0.0994	0.0083	0.0297	0.11	0.0035	0.13	0.01	0.0826	0.13	0.28	T	0.064	B	0.161	B	0.000	U	0.381	P	1.33	L	2.75	T	-1.014	T	0.000	T	0.132	2.846	15.48	2.8	0.594	0.356	9.461	2.84599	2.84599	0.13	0.116512	0.024512	NA	0.094	NA	9.0159214
750	17	4720469	4720469	C	T	exonic	PLD2	NA	nonsynonymous SNV	PLD2:NM_001243108:exon17:c.C1730T:p.T577I,PLD2:NM_002663:exon17:c.C1730T:p.T577I	exonic	ENSG00000129219	NA	nonsynonymous SNV	ENSG00000129219:ENST00000576983:exon2:c.C32T:p.T11I,ENSG00000129219:ENST00000263088:exon17:c.C1730T:p.T577I,ENSG00000129219:ENST00000572940:exon17:c.C1730T:p.T577I	NA	NA	17p13.2	NA	NA	NA	NA	rs1052748	0.29	0.29	0.256	0.2498	0.4443	0.1062	0.415	0.1051	0.2761	0.47	0.09	0.44	0.14	0.3925	0.48	0.4	T	0.001	B	0.002	B	0.424	N	1.000	P	0.28	N	2.01	T	-0.964	T	0.000	T	0.258	-0.961	0.323	-8.96	-2.558	-1.345	5.764	-0.960831	NA	0.24	0.48093	0.166818	NA	0.355	NA	9.0156034
751	11	404317	404317	C	T	exonic	PKP3	NA	synonymous SNV	PKP3:NM_007183:exon12:c.C2352T:p.F784F	exonic	ENSG00000184363	NA	synonymous SNV	ENSG00000184363:ENST00000331563:exon12:c.C2352T:p.F784F	Score=420;Name=lod=68	NA	11p15.5	Score=967;Name=V$CETS1P54_01	NA	NA	NA	rs1134578	0.44	0.44	0.403	0.451478	0.5586	0.3542	0.5893	0.3147	0.5286	0.55	0.35	0.56	0.28	0.5364	0.56	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.887	T	0.000	T	.	0.76	8.024	3.36	0.931	2.547	9.567	0.760279	NA	NA	0.559599	0.366515	NA	0.42	NA	9.0120676
751	8	27634064	27634064	C	T	exonic	ESCO2	NA	nonsynonymous SNV	ESCO2:NM_001017420:exon3:c.C239T:p.A80V	exonic	ENSG00000171320	NA	nonsynonymous SNV	ENSG00000171320:ENST00000305188:exon3:c.C239T:p.A80V,ENSG00000171320:ENST00000519637:exon3:c.C239T:p.A80V,ENSG00000171320:ENST00000522378:exon3:c.C239T:p.A80V,ENSG00000171320:ENST00000523566:exon3:c.C239T:p.A80V	Score=499;Name=lod=142	NA	8p21.1	NA	NA	NA	NA	rs4732748	0.13	0.13	0.115	0.139377	0.1074	0.244	0.0879	0.0961	0.1595	0.09	0.24	0.09	0.11	0.1148	0.24	0.51	T	0.023	B	0.018	B	0.075	N	0.983	P	1.545	L	0.71	T	-1.060	T	0.000	T	0.204	0.246	5.329	1.8	0.115	-0.030	5.705	0.246103	NA	0.29	0.099302	0.097594	ID=COSM150477;OCCURENCE=1(stomach)	0.188	CLINSIG=non-pathogenic;CLNDBN=Roberts-SC_phocomelia_syndrome;CLNREVSTAT=single;CLNACC=RCV000020402.1;CLNDSDB=GeneReviews:MedGen:OMIM:OMIM:Orphanet:SNOMED_CT;CLNDSDBID=NBK1153:C0392475:268300:269000:ORPHA3103:48718006	9.0118314
751	14	24883887	24883887	G	A	exonic	NYNRIN	NA	nonsynonymous SNV	NYNRIN:NM_025081:exon9:c.G2932A:p.A978T	exonic	ENSG00000205978	NA	nonsynonymous SNV	ENSG00000205978:ENST00000382554:exon9:c.G2932A:p.A978T	NA	Name=LDL cholesterol	14q12	NA	NA	NA	NA	rs8017377	0.25	0.25	0.247	0.244409	0.4811	0.0496	0.255	0.1218	0.3599	0.46	0.05	0.27	0.12	0.3758	0.46	0.25	T	0.002	B	0.001	B	.	.	1.000	P	0.69	N	2.8	T	-0.910	T	0.000	T	0.029	1.239	10.03	-9.08	-1.685	-0.409	0.388	1.239423	1.239423	0.13	0.464853	0.157045	NA	0.362	NA	9.0115804
751	4	169928842	169928842	G	T	exonic	CBR4	NA	nonsynonymous SNV	CBR4:NM_032783:exon2:c.C208A:p.L70M	exonic	ENSG00000145439	NA	nonsynonymous SNV	ENSG00000145439:ENST00000306193:exon2:c.C208A:p.L70M,ENSG00000145439:ENST00000504480:exon2:c.C208A:p.L70M,ENSG00000145439:ENST00000504561:exon2:c.C199A:p.L67M	Score=555;Name=lod=240	NA	4q32.3	NA	NA	NA	NA	rs2877380	0.74	0.74	0.718	0.720048	0.7903	0.9712	0.7032	0.4206	0.8057	0.81	0.96	0.69	0.42	0.7685	0.96	.	.	0.005	B	0.004	B	0.000	N	1.000	P	1.355	L	-2.46	D	-0.951	T	0.000	T	0.094	2.617	14.71	5.56	0.944	3.215	12.926	2.616757	2.616757	0.38	0.763378	0.480027	NA	0.623	NA	9.0111554
751	11	124006993	124006993	G	A	exonic	VWA5A	NA	nonsynonymous SNV	VWA5A:NM_014622:exon12:c.G1517A:p.R506K,VWA5A:NM_001130142:exon13:c.G1517A:p.R506K	exonic	ENSG00000110002	NA	nonsynonymous SNV	ENSG00000110002:ENST00000392748:exon12:c.G1517A:p.R506K,ENSG00000110002:ENST00000456829:exon13:c.G1517A:p.R506K	NA	NA	11q24.2	NA	NA	NA	NA	rs2276053	0.11	0.11	0.114	0.119409	0.1014	0.0575	0.0764	0.1861	0.1421	0.11	0.05	0.1	0.18	0.1149	0.18	0.94	T	0.0	B	0.0	B	0.046	N	1.000	P	-1.975	N	3.87	T	-0.966	T	0.000	T	0.01	-1.058	0.186	-10.7	-3.343	-2.735	2.650	-1.057595	NA	1	0.107118	0.169696	NA	0.181	NA	9.0099154
751	1	19652874	19652874	G	A	exonic	PQLC2	NA	nonsynonymous SNV	PQLC2:NM_001040125:exon5:c.G518A:p.G173D,PQLC2:NM_001040126:exon5:c.G323A:p.G108D,PQLC2:NM_017765:exon6:c.G518A:p.G173D	exonic	ENSG00000040487	NA	nonsynonymous SNV	ENSG00000040487:ENST00000432465:exon3:c.G233A:p.G78D,ENSG00000040487:ENST00000375153:exon5:c.G518A:p.G173D,ENSG00000040487:ENST00000400548:exon5:c.G323A:p.G108D,ENSG00000040487:ENST00000375155:exon6:c.G518A:p.G173D	NA	NA	1p36.13	NA	Name=Egr-1	Name=5	NA	rs41264079	0.06	0.06	0.059	0.0495208	0.1243	0.0089	0.0447	0.0061	0.0767	0.13	0.0017	0.05	0.01	0.0893	0.13	0.68	T	0.036	B	0.011	B	0.123	N	1.000	N	1.48	L	0.92	T	-1.070	T	0.001	T	0.177	1.167	9.751	1.03	0.623	0.561	6.784	1.167406	NA	0.15	0.110956	0.018611	ID=COSM424910;OCCURENCE=2(breast)	0.043	NA	9.0087774
751	19	41522715	41522715	C	T	exonic	CYP2B6	NA	nonsynonymous SNV	CYP2B6:NM_000767:exon9:c.C1459T:p.R487C	exonic	ENSG00000197408	NA	nonsynonymous SNV	ENSG00000197408:ENST00000330446:exon5:c.C859T:p.R287C,ENSG00000197408:ENST00000593831:exon5:c.C751T:p.R251C,ENSG00000197408:ENST00000324071:exon9:c.C1459T:p.R487C	NA	NA	19q13.2	Score=850;Name=V$HAND1E47_01	NA	NA	NA	rs3211371	0.05	0.05	0.04	0.0535144	0.1123	0.003	0.072	0.0113	0.089	0.1	0.0017	0.07	0.01	0.0909	0.12	1	T	0.025	B	0.01	B	0.837	N	1.000	N	-1.14	N	-0.25	T	-1.086	T	0.001	T	0.039	0.023	4.132	-6.04	-0.883	-0.681	4.282	0.022744	NA	1	0.121744	0.03064	NA	0.116	NA	9.0083894
752	15	65108504	65108504	A	T	exonic	PIF1	NA	nonsynonymous SNV	PIF1:NM_025049:exon13:c.T1919A:p.I640N	exonic	ENSG00000140451	NA	nonsynonymous SNV	ENSG00000140451:ENST00000268043:exon13:c.T1919A:p.I640N,ENSG00000140451:ENST00000559239:exon13:c.T1919A:p.I640N	Score=284;Name=lod=19	NA	15q22.31	NA	Name=EBF	NA	NA	rs17802279	0.3	0.3	0.314	0.276957	0.4891	0.1101	0.2608	0.2587	0.2669	0.49	0.08	0.3	0.29	0.3766	0.49	1	T	0.0	B	0.0	B	.	.	0.999	P	0	N	-0.05	T	-0.930	T	0.000	T	0.105	-1.028	0.222	3.27	0.070	0.543	2.698	-1.028031	NA	1	0.463247	0.307675	NA	0.413	NA	9.0043864
752	19	53344426	53344426	T	C	exonic	ZNF468	NA	nonsynonymous SNV	ZNF468:NM_001008801:exon4:c.A1121G:p.H374R	exonic	ENSG00000204604	NA	nonsynonymous SNV	ENSG00000204604:ENST00000390651:exon4:c.A962G:p.H321R,ENSG00000204604:ENST00000595646:exon4:c.A1121G:p.H374R,ENSG00000204604:ENST00000396409:exon5:c.A962G:p.H321R	NA	NA	19q13.41	NA	Name=ZNF274,SETDB1	Name=2	NA	rs12462929	0.09	0.09	0.077	0.0970447	0.1163	0.0496	0.1124	0.0998	0.1115	0.11	0.05	0.1	0.08	0.1069	0.11	0.27	T	0.0	B	0.0	B	.	.	1.000	P	-1.835	N	2.31	T	-0.959	T	0.000	T	0.016	-0.959	0.325	0.482	-0.672	-0.339	3.240	-0.959394	NA	0.84	0.107442	0.096232	NA	0.145	NA	9.0026914
752	3	108475974	108475974	G	A	exonic	RETNLB	NA	nonsynonymous SNV	RETNLB:NM_032579:exon1:c.C59T:p.P20L	exonic	ENSG00000163515	NA	nonsynonymous SNV	ENSG00000163515:ENST00000295755:exon1:c.C59T:p.P20L	NA	NA	3q13.13	NA	NA	Name=3	NA	rs11708527	0.16	0.16	0.161	0.200679	0.2783	0.0377	0.232	0.1165	0.3804	0.28	0.04	0.21	0.09	0.2666	0.29	0.1	T	0.763	P	0.092	B	0.209	N	1.000	P	1.545	L	0.99	T	-0.997	T	0.000	T	0.101	1.834	12.09	2.52	0.450	0.091	5.155	1.833577	1.833577	0.09	0.28686	0.146164	NA	0.13	NA	9.0015734
752	12	48866585	48866585	A	C	exonic	ANP32D	NA	nonsynonymous SNV	ANP32D:NM_012404:exon1:c.A138C:p.L46F	exonic	ENSG00000139223	NA	nonsynonymous SNV	ENSG00000139223:ENST00000266594:exon1:c.A138C:p.L46F	Score=694;Name=lod=883	NA	12q13.11	NA	NA	NA	NA	rs7956679	0.28	0.28	0.227	0.290335	0.0815	0.6548	0.3357	0.1604	0.273	0.09	0.63	0.3	0.14	0.1867	0.63	1	T	0.0	B	0.0	B	0.000	N	0.999	P	-1.79	N	9.01	T	-0.905	T	0.000	T	0.029	-2.007	0.007	0.58	-0.422	1.160	2.090	-2.00677	NA	1	0.064535	0.155016	NA	0.174	NA	9.0005984
752	13	45148257	45148257	G	A	exonic	TSC22D1	NA	nonsynonymous SNV	TSC22D1:NM_183422:exon1:c.C1954T:p.P652S	exonic	ENSG00000102804	NA	nonsynonymous SNV	ENSG00000102804:ENST00000458659:exon1:c.C1954T:p.P652S	NA	NA	13q14.11	NA	Name=AP-2gamma	Name=119	NA	rs9525983	0.05	0.05	0.051	0.0501198	0.1173	0.001	0.0922	0.0068	0.0603	0.12	NA	0.05	0.01	0.092	0.12	0.92	T	0.001	B	0.002	B	0.033	N	1.000	N	0.255	N	1.49	T	-1.016	T	0.001	T	0.02	-2.318	0.004	0.994	0.239	0.937	4.496	-2.318264	NA	0.5	0.123605	0.023831	NA	0.13	NA	9.0004284
752	21	45709906	45709906	C	G	exonic	AIRE	NA	nonsynonymous SNV	AIRE:NM_000383:exon7:c.C834G:p.S278R	exonic	ENSG00000160224	NA	nonsynonymous SNV	ENSG00000160224:ENST00000291582:exon7:c.C834G:p.S278R	NA	NA	21q22.3	NA	NA	NA	NA	rs1800520	0.23	0.23	0.228	0.228235	0.0835	0.3462	0.1268	0.3064	0.2219	0.09	0.38	0.14	0.33	0.1579	0.38	0.56	T	0.0	B	0.0	B	0.028	N	1.000	P	-1.245	N	-3.47	D	-0.989	T	0.000	T	0.108	-1.096	0.147	1.58	0.258	-0.271	3.242	-1.095963	NA	0.37	0.091554	0.284013	NA	0.232	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116303.2;CLNDSDB=.;CLNDSDBID=.	9.0003794
752	16	633125	633125	T	C	exonic	PIGQ	NA	nonsynonymous SNV	PIGQ:NM_148920:exon10:c.T1774C:p.C592R	exonic	ENSG00000007541	NA	nonsynonymous SNV	ENSG00000007541:ENST00000026218:exon10:c.T1774C:p.C592R	NA	NA	16p13.3	NA	Name=c-Myc,CTCF	Name=4	NA	rs1045277	0.52	0.52	0.486	0.530751	0.4324	0.6369	0.4885	0.4758	0.6268	0.45	0.63	0.49	0.51	0.4907	0.63	.	.	0.0	B	0.0	B	.	.	1.000	P	0	N	1.94	T	-0.983	T	0.000	T	0.049	-0.642	1.168	1.68	0.306	-2.106	4.255	-0.641783	NA	0.78	0.409884	0.470014	ID=COSM435483;OCCURENCE=1(breast),1(large_intestine)	0.428	NA	9.0003494
752	6	116938232	116938232	C	G	exonic	RSPH4A	NA	nonsynonymous SNV	RSPH4A:NM_001010892:exon1:c.C446G:p.T149S,RSPH4A:NM_001161664:exon1:c.C446G:p.T149S	exonic	ENSG00000111834	NA	nonsynonymous SNV	ENSG00000111834:ENST00000229554:exon1:c.C446G:p.T149S,ENSG00000111834:ENST00000368580:exon1:c.C446G:p.T149S,ENSG00000111834:ENST00000368581:exon1:c.C446G:p.T149S	NA	NA	6q22.1	Score=803;Name=V$CEBP_C	NA	NA	NA	rs13213314	0.06	0.06	0.04	0.0371406	0.1292	NA	0.049	0.0091	0.0102	0.13	NA	0.05	0.02	0.0814	0.13	0.56	T	0.004	B	0.005	B	0.469	N	1.000	P	0.805	L	1.54	T	-1.082	T	0.057	T	0.031	0.52	6.816	2.84	0.465	-0.850	5.879	0.519696	NA	0.15	0.122791	0.026782	NA	0.072	NA	8.9999424
752	4	8589023	8589023	G	A	exonic	GPR78	NA	nonsynonymous SNV	GPR78:NM_080819:exon3:c.G1025A:p.R342H	exonic	ENSG00000155269	NA	nonsynonymous SNV	ENSG00000155269:ENST00000382487:exon3:c.G1025A:p.R342H	NA	NA	4p16.1	NA	NA	NA	NA	rs9685931	0.11	0.11	0.121	0.116813	0.1143	0.0427	0.0548	0.2035	0.1227	0.12	0.04	0.07	0.23	0.1096	0.23	0.35	T	0.0	B	0.0	B	.	.	1.000	P	0	N	0.08	T	-1.081	T	0.000	T	0.1	-1.287	0.04	-4.03	-2.614	.	3.354	-1.286694	NA	0.35	0.109597	0.196047	ID=COSM448271;OCCURENCE=1(breast)	0.138	NA	8.9998364
752	16	57937788	57937788	T	C	exonic	CNGB1	NA	nonsynonymous SNV	CNGB1:NM_001297:exon27:c.A2732G:p.K911R	exonic	ENSG00000070729	NA	nonsynonymous SNV	ENSG00000070729:ENST00000251102:exon27:c.A2732G:p.K911R,ENSG00000070729:ENST00000564448:exon27:c.A2714G:p.K905R	Score=564;Name=lod=261	NA	16q21	NA	NA	NA	NA	rs2303785	0.09	0.09	0.082	0.0770767	0.1203	0.0843	0.1441	0.0091	0.0695	0.12	0.09	0.14	0.0041	0.1047	0.14	0.83	T	0.0	B	0.002	B	0.001	N	0.000	P	1.445	L	-4.12	D	-0.693	T	0.020	T	0.047	0.399	6.169	1.45	0.389	-0.330	5.705	0.399308	NA	1	0.109631	0.029342	NA	0.145	NA	8.9987024
752	2	171073887	171073887	G	A	exonic	MYO3B	NA	synonymous SNV	MYO3B:NM_001083615:exon6:c.G585A:p.P195P,MYO3B:NM_138995:exon6:c.G585A:p.P195P	exonic	ENSG00000071909	NA	synonymous SNV	ENSG00000071909:ENST00000317935:exon6:c.G585A:p.P195P,ENSG00000071909:ENST00000334231:exon6:c.G612A:p.P204P,ENSG00000071909:ENST00000408978:exon6:c.G585A:p.P195P,ENSG00000071909:ENST00000409044:exon6:c.G585A:p.P195P,ENSG00000071909:ENST00000484338:exon6:c.G612A:p.P204P	NA	NA	2q31.1	Score=820;Name=V$BRN2_01	NA	NA	NA	rs2161916	0.56	0.56	0.575	0.576677	0.5636	0.5714	0.4179	0.6316	0.6339	0.58	0.57	0.47	0.59	0.5554	0.63	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.097	T	0.000	T	.	0.69	7.686	-7.85	-2.287	-1.854	12.064	0.690037	NA	NA	0.549214	0.631113	NA	0.406	NA	8.9984526
752	3	132338346	132338346	T	G	exonic	ACAD11	NA	nonsynonymous SNV	ACAD11:NM_032169:exon10:c.A1241C:p.K414T	exonic	ENSG00000240303	NA	nonsynonymous SNV	ENSG00000240303:ENST00000264990:exon10:c.A1241C:p.K414T,ENSG00000240303:ENST00000355458:exon10:c.A1241C:p.K414T,ENSG00000240303:ENST00000481970:exon10:c.A1241C:p.K414T	NA	NA	3q22.1	NA	NA	NA	NA	rs41272321	0.1	0.1	0.074	0.0944489	0.1143	0.12	0.1297	0.0053	0.1431	0.13	0.12	0.13	0.01	0.1154	0.13	0.01	D	0.293	B	0.155	B	.	.	1.000	P	1.2	L	1.94	T	-0.323	T	0.069	T	0.249	1.265	10.13	2.05	0.106	0.129	3.189	1.265199	1.265199	0.03	0.105821	0.024285	NA	0.065	NA	8.9978124
752	7	131195959	131195959	C	T	exonic	PODXL	NA	nonsynonymous SNV	PODXL:NM_001018111:exon2:c.G334A:p.G112S,PODXL:NM_005397:exon2:c.G334A:p.G112S	exonic	ENSG00000128567	NA	nonsynonymous SNV	ENSG00000128567:ENST00000322985:exon2:c.G334A:p.G112S,ENSG00000128567:ENST00000378555:exon2:c.G334A:p.G112S,ENSG00000128567:ENST00000446198:exon2:c.G334A:p.G112S,ENSG00000128567:ENST00000537928:exon2:c.G334A:p.G112S,ENSG00000128567:ENST00000541194:exon2:c.G340A:p.G114S	NA	NA	7q32.3	NA	NA	NA	NA	rs3735035	0.39	0.39	0.379	0.363818	0.4354	0.6518	0.3948	0.0363	0.4141	0.46	0.61	0.36	0.06	0.4272	0.61	0.74	T	0.029	B	0.002	B	0.000	N	1.000	P	0	N	3.06	T	-0.952	T	0.000	T	0.086	-0.068	3.668	-5.63	-2.759	-1.188	1.232	-0.06807	NA	0.53	0.473256	0.106673	NA	0.384	NA	8.9974774
752	4	187627792	187627792	T	C	exonic	FAT1	NA	nonsynonymous SNV	FAT1:NM_005245:exon2:c.A3190G:p.R1064G	exonic	ENSG00000083857	NA	nonsynonymous SNV	ENSG00000083857:ENST00000441802:exon2:c.A3190G:p.R1064G	Score=451;Name=lod=91	NA	4q35.2	NA	NA	NA	NA	rs11939575	0.73	0.73	0.724	0.745807	0.7803	0.5	0.7176	0.907	0.7658	0.77	0.5	0.77	0.89	0.7609	0.89	1	T	0.0	B	0.0	B	0.000	N	0.996	P	-2.95	N	0.54	T	-0.947	T	0.000	T	0.104	-0.019	3.914	4.6	1.172	5.937	12.991	-0.019446	NA	1	0.795781	0.893072	NA	0.797	NA	8.9963524
753	10	116032519	116032519	A	G	exonic	VWA2	NA	nonsynonymous SNV	VWA2:NM_001272046:exon6:c.A392G:p.E131G	exonic	ENSG00000165816	NA	nonsynonymous SNV	ENSG00000165816:ENST00000392982:exon6:c.A392G:p.E131G,ENSG00000165816:ENST00000603594:exon6:c.A392G:p.E131G	Score=436;Name=lod=79	NA	10q25.3	NA	NA	NA	NA	rs597371	0.5	0.5	0.522	0.557109	0.4324	0.3373	0.4741	0.8782	0.5368	0.42	0.34	0.46	0.86	0.477	0.86	1	T	0.0	B	0.0	B	0.000	N	0.971	P	-4.035	N	-1.33	T	-0.903	T	0.000	T	0.11	-0.689	1.007	4.28	0.556	5.047	9.054	-0.689115	NA	1	0.430233	0.800272	NA	0.551	NA	8.9937004
753	17	36358847	36358847	T	A	ncRNA_exonic	LOC440434	NA	NA	NA	exonic	ENSG00000174093	NA	nonsynonymous SNV	ENSG00000174093:ENST00000544906:exon5:c.A379T:p.I127L,ENSG00000174093:ENST00000312412:exon6:c.A844T:p.I282L,ENSG00000174093:ENST00000520237:exon6:c.A844T:p.I282L,ENSG00000174093:ENST00000518004:exon7:c.A832T:p.I278L	Score=716;Name=lod=1085	NA	17q12	NA	Name=FOXA1_(C-20)	Name=2	NA	rs77355093	NA	NA	0.814	0.829473	0.7604	0.8502	0.8458	0.944	0.7127	NA	NA	NA	NA	0.746	0.76	1	T	.	.	.	.	.	.	.	.	.	.	4.63	T	-0.988	T	0.078	T	0.267	-1.813	0.009	1.38	-0.133	1.862	3.700	-1.813199	NA	1	NA	NA	NA	0.725	NA	8.9936
753	18	72344509	72344509	G	A	exonic	ZNF407	NA	nonsynonymous SNV	ZNF407:NM_001146189:exon1:c.G1534A:p.G512R,ZNF407:NM_001146190:exon1:c.G1534A:p.G512R,ZNF407:NM_017757:exon1:c.G1534A:p.G512R	exonic	ENSG00000215421	NA	nonsynonymous SNV	ENSG00000215421:ENST00000299687:exon1:c.G1534A:p.G512R,ENSG00000215421:ENST00000309902:exon1:c.G1534A:p.G512R,ENSG00000215421:ENST00000577538:exon1:c.G1534A:p.G512R,ENSG00000215421:ENST00000582337:exon2:c.G1534A:p.G512R	NA	NA	18q22.3	NA	NA	NA	NA	rs7227263	0.08	0.08	0.089	0.0676917	0.1064	0.001	0.0663	0.112	0.0378	0.12	NA	0.07	0.12	0.0969	0.14	0.31	T	0.001	B	0.0	B	0.151	U	1.000	P	-0.205	N	3.44	T	-0.958	T	0.000	T	0.022	0.969	8.956	-9.59	-0.515	-0.751	5.319	0.96938	NA	NA	0.138145	0.099901	NA	0.072	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118932.2;CLNDSDB=.;CLNDSDBID=.	8.9918884
753	4	40778162	40778162	T	G	exonic	NSUN7	NA	nonsynonymous SNV	NSUN7:NM_024677:exon7:c.T922G:p.S308A	exonic	ENSG00000179299	NA	nonsynonymous SNV	ENSG00000179299:ENST00000316607:exon7:c.T922G:p.S308A,ENSG00000179299:ENST00000381782:exon7:c.T922G:p.S308A	Score=608;Name=lod=393	NA	4p14	NA	NA	NA	NA	rs2437323	0.75	0.75	0.737	0.729233	0.7714	0.5208	0.8804	0.8744	0.5971	0.78	0.53	0.88	0.89	0.7673	0.89	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-2.085	N	3.1	T	-0.970	T	0.000	T	0.127	0.252	5.36	5.61	1.388	5.381	15.791	0.251716	NA	1	0.802977	0.86768	ID=COSM149667;OCCURENCE=1(stomach)	0.79	NA	8.9916564
753	5	37173930	37173930	A	C	exonic	C5orf42	NA	nonsynonymous SNV	C5orf42:NM_023073:exon32:c.T6098G:p.F2033C	exonic	ENSG00000197603	NA	nonsynonymous SNV	ENSG00000197603:ENST00000509849:exon17:c.T3110G:p.F1037C,ENSG00000197603:ENST00000514429:exon17:c.T3242G:p.F1081C,ENSG00000197603:ENST00000508244:exon31:c.T6098G:p.F2033C,ENSG00000197603:ENST00000274258:exon32:c.T2738G:p.F913C,ENSG00000197603:ENST00000425232:exon32:c.T6098G:p.F2033C	NA	NA	5p13.2	NA	NA	NA	NA	rs10076911	0.15	0.15	0.148	0.172724	0.0954	0.0903	0.1614	0.3457	0.1115	0.09	0.05	0.19	0.33	0.1351	0.33	0.26	T	0.0	B	0.0	B	0.148	N	1.000	P	-0.69	N	1.97	T	-0.912	T	0.000	T	0.074	0.492	6.667	3.76	0.198	1.126	3.687	0.491699	NA	0.24	0.111279	0.301634	ID=COSM1437344,COSM1437345;OCCURENCE=1(large_intestine)	0.109	NA	8.9915544
753	19	9083791	9083791	G	A	exonic	MUC16	NA	nonsynonymous SNV	MUC16:NM_024690:exon1:c.C8024T:p.S2675L	exonic	ENSG00000181143	NA	nonsynonymous SNV	ENSG00000181143:ENST00000397910:exon1:c.C8024T:p.S2675L	NA	NA	19p13.2	NA	NA	NA	NA	rs60106152	0.15	0.15	0.137	0.146166	0.1252	0.1746	0.0965	0.1573	0.1585	0.12	0.16	0.11	0.19	0.1222	0.19	0	D	0.0	B	0.0	B	.	.	.	.	0	N	4.21	T	-0.886	T	0.000	T	0.04	-1.645	0.013	-0.47	-2.009	-1.868	.	-1.64473	NA	0.16	0.098651	0.127328	NA	0.094	NA	8.9872824
754	1	152081921	152081921	G	C	exonic	TCHH	NA	nonsynonymous SNV	TCHH:NM_007113:exon3:c.C3772G:p.L1258V	exonic	ENSG00000159450	NA	nonsynonymous SNV	ENSG00000159450:ENST00000368804:exon2:c.C3772G:p.L1258V	NA	NA	1q21.3	NA	Name=ZNF263,HA-E2F1	Name=22	NA	rs2496253	0.5	0.5	0.508	0.56849	0.4016	0.5992	0.647	0.4781	0.7751	0.42	0.58	0.58	0.48	0.5071	0.58	0.3	T	0.0	B	0.0	B	.	.	1.000	P	-0.695	N	3.71	T	-0.896	T	0.002	T	0.118	0.713	7.8	3.14	0.218	-0.233	12.104	0.713488	NA	NA	0.439746	0.440394	NA	0.507	NA	8.9848874
754	9	130242166	130242166	A	G	exonic	LRSAM1	NA	nonsynonymous SNV	LRSAM1:NM_001005374:exon13:c.A952G:p.N318D,LRSAM1:NM_138361:exon13:c.A952G:p.N318D,LRSAM1:NM_001005373:exon14:c.A952G:p.N318D,LRSAM1:NM_001190723:exon14:c.A952G:p.N318D	exonic	ENSG00000148356	NA	nonsynonymous SNV	ENSG00000148356:ENST00000323301:exon13:c.A952G:p.N318D,ENSG00000148356:ENST00000373322:exon13:c.A952G:p.N318D,ENSG00000148356:ENST00000300417:exon14:c.A952G:p.N318D,ENSG00000148356:ENST00000373324:exon14:c.A952G:p.N318D	Score=358;Name=lod=38	NA	9q33.3	NA	NA	NA	NA	rs1539567	0.74	0.74	0.697	0.727236	0.7982	0.6925	0.8098	0.6256	0.7689	0.81	0.7	0.77	0.64	0.7776	0.81	0.73	T	0.0	B	0.0	B	0.000	N	1.000	P	-1.5	N	1.06	T	-0.957	T	0.000	T	0.063	-0.387	2.182	5.86	1.502	4.649	8.71	-0.387357	NA	0.6	0.772685	0.681571	NA	0.703	NA	8.9848484
754	11	17809724	17809724	T	C	exonic	SERGEF	NA	nonsynonymous SNV	SERGEF:NM_012139:exon11:c.A1285G:p.K429E	exonic	ENSG00000129158	NA	nonsynonymous SNV	ENSG00000129158:ENST00000265965:exon11:c.A1285G:p.K429E	Score=289;Name=lod=20	NA	11p15.1	NA	NA	NA	NA	rs1528	0.1	0.1	0.092	0.127396	0.1243	0.002	0.0663	0.2156	0.184	0.13	0.0017	0.07	0.18	0.1145	0.18	1	T	0.0	B	0.0	B	0.053	N	0.000	P	-0.695	N	1.2	T	-1.001	T	0.000	T	0.221	0.97	8.959	3.12	0.678	0.547	8.054	0.970059	NA	1	0.109713	0.174773	NA	0.109	NA	8.9848204
754	19	54722250	54722250	T	C	exonic	LILRB3	NA	nonsynonymous SNV	LILRB3:NM_001081450:exon11:c.A1573G:p.R525G,LILRB3:NM_006864:exon11:c.A1573G:p.R525G	exonic	ENSG00000204577,ENSG00000244482	NA	nonsynonymous SNV	ENSG00000204577:ENST00000245620:exon11:c.A1573G:p.R525G,ENSG00000244482:ENST00000270464:exon11:c.A1573G:p.R525G,ENSG00000244482:ENST00000419410:exon11:c.A1573G:p.R525G,ENSG00000204577:ENST00000424807:exon11:c.A1573G:p.R525G,ENSG00000244482:ENST00000440558:exon11:c.A1573G:p.R525G,ENSG00000204577:ENST00000346401:exon12:c.A1609G:p.R537G,ENSG00000204577:ENST00000391750:exon12:c.A1573G:p.R525G,ENSG00000204577:ENST00000407860:exon12:c.A1624G:p.R542G	NA	NA	19q13.42	Score=751;Name=V$PAX4_04	NA	NA	NA	rs1132610	0.13	0.13	0.134	0.147764	0.1103	0.002	0.1354	0.3525	0.0685	0.1	0.0035	0.12	0.36	0.1175	0.36	1	T	0.001	B	0.007	B	.	.	1.000	P	-1.82	N	7.49	T	-1.014	T	0.000	T	0.135	-2.044	0.006	-0.331	-0.189	-2.023	4.272	-2.043597	NA	1	0.120814	0.31389	NA	0.087	NA	8.9847194
754	12	132250712	132250712	G	C	exonic	SFSWAP	NA	synonymous SNV	SFSWAP:NM_001261411:exon13:c.G2001C:p.L667L,SFSWAP:NM_004592:exon13:c.G2001C:p.L667L	exonic	ENSG00000061936	NA	synonymous SNV	ENSG00000061936:ENST00000535236:exon11:c.G1380C:p.L460L,ENSG00000061936:ENST00000261674:exon13:c.G2001C:p.L667L,ENSG00000061936:ENST00000541286:exon13:c.G2001C:p.L667L	Score=502;Name=lod=146	NA	12q24.33	NA	NA	NA	NA	rs1051233	0.13	0.13	0.09	0.101438	0.2366	NA	0.2291	0.0091	0.1012	0.23	NA	0.27	0.02	0.1899	0.27	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.997	T	0.000	T	.	1.147	9.674	-9.28	-1.785	-0.165	1.603	1.147491	NA	NA	0.255581	0.046754	NA	0.072	NA	8.9845856
754	2	203846817	203846817	A	T	exonic	ALS2CR8	NA	nonsynonymous SNV	ALS2CR8:NM_001104586:exon15:c.A1712T:p.Y571F,ALS2CR8:NM_024744:exon16:c.A1712T:p.Y571F	exonic	ENSG00000138380	NA	nonsynonymous SNV	ENSG00000138380:ENST00000414439:exon13:c.A1406T:p.Y469F,ENSG00000138380:ENST00000545253:exon13:c.A1448T:p.Y483F,ENSG00000138380:ENST00000428585:exon14:c.A1484T:p.Y495F,ENSG00000138380:ENST00000320443:exon15:c.A1712T:p.Y571F,ENSG00000138380:ENST00000402905:exon15:c.A1712T:p.Y571F,ENSG00000138380:ENST00000545262:exon15:c.A1484T:p.Y495F,ENSG00000138380:ENST00000438828:exon16:c.A1712T:p.Y571F	Score=446;Name=lod=87	NA	2q33.2	NA	NA	NA	NA	rs72932557	0.07	0.07	0.067	0.0471246	0.1302	0.0159	0.0749	0.0174	0.0143	0.14	0.02	0.09	0.02	0.091	0.14	1	T	0.0	B	0.0	B	0.002	N	0.671	P	-1.79	N	.	.	-1.017	T	0.000	T	0.117	-0.195	3.052	4.26	0.341	0.917	8.964	-0.195095	NA	1	0.128502	0.035249	NA	0.036	NA	8.9836314
754	7	143657473	143657473	A	G	exonic	OR2F1	NA	nonsynonymous SNV	OR2F1:NM_012369:exon1:c.A410G:p.H137R	exonic	ENSG00000213215	NA	nonsynonymous SNV	ENSG00000213215:ENST00000392899:exon1:c.A410G:p.H137R	NA	NA	7q35	NA	NA	NA	NA	rs2072165	0.22	0.22	0.178	0.226038	0.1093	0.1627	0.2378	0.4463	0.1053	0.11	0.18	0.24	0.41	0.1515	0.41	0.05	D	0.001	B	0.002	B	0.009	N	0.999	P	0.58	N	1.31	T	-0.940	T	0.000	T	0.118	-0.215	2.96	3.17	0.524	0.163	7.008	-0.214763	NA	0.09	0.090233	0.388334	NA	0.174	NA	8.9823004
754	19	22868837	22868837	A	G	intergenic	ZNF492,ZNF99	dist=18365;dist=66148	NA	NA	ncRNA_exonic	ENSG00000198153	NA	NA	NA	Score=420;Name=lod=68	NA	19p12	NA	Name=ZNF274	NA	NA	rs10423345	0.06	0.06	0.065	0.0688898	0.001	NA	0.0144	0.2511	0.002	0.0013	NA	0.01	0.26	0.0176	0.26	0	D	.	.	.	.	.	.	.	.	.	.	.	.	-1.048	T	0.000	T	.	2.148	13.14	0.8	0.237	3.370	5.548	2.147761	2.147761	NA	NA	NA	NA	0.036	NA	8.9814
754	4	3189547	3189547	C	A	exonic	HTT	NA	nonsynonymous SNV	HTT:NM_002111:exon39:c.C5159A:p.T1720N	exonic	ENSG00000197386	NA	nonsynonymous SNV	ENSG00000197386:ENST00000355072:exon39:c.C5159A:p.T1720N	NA	NA	4p16.3	NA	NA	NA	NA	rs363125	0.17	0.17	0.179	0.189097	0.1083	0.0089	0.1225	0.4834	0.1074	0.11	0.0035	0.12	0.48	0.1268	0.48	0.5	T	0.0	B	0.0	B	0.971	N	1.000	P	0.69	N	3.57	T	-0.905	T	0.000	T	0.022	-0.48	1.789	-11.3	-2.325	-1.105	8.434	-0.479891	NA	0.49	0.116959	0.401733	NA	0.167	NA	8.9812744
754	6	7577260	7577260	C	T	exonic	DSP	NA	synonymous SNV	DSP:NM_001008844:exon20:c.C2862T:p.C954C,DSP:NM_004415:exon20:c.C2862T:p.C954C	exonic	ENSG00000096696	NA	synonymous SNV	ENSG00000096696:ENST00000379802:exon20:c.C2862T:p.C954C,ENSG00000096696:ENST00000418664:exon20:c.C2862T:p.C954C	Score=399;Name=lod=56	NA	6p24.3	Score=853;Name=V$COUP_01	NA	Name=2	NA	rs2064217	0.26	0.26	0.258	0.27516	0.2266	0.1915	0.2363	0.4039	0.2648	0.23	0.19	0.24	0.4	0.2438	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.854402	NA	NA	0.215864	0.37222	ID=COSM150041;OCCURENCE=1(stomach)	0.319	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000038021.1;CLNDSDB=.;CLNDSDBID=.	8.9804026
754	8	27679981	27679981	T	C	exonic	PBK	NA	nonsynonymous SNV	PBK:NM_018492:exon5:c.A320G:p.N107S	exonic	ENSG00000168078	NA	nonsynonymous SNV	ENSG00000168078:ENST00000301905:exon5:c.A320G:p.N107S,ENSG00000168078:ENST00000522944:exon5:c.A320G:p.N107S	Score=516;Name=lod=167	NA	8p21.1	NA	NA	NA	NA	rs3779620	0.2	0.2	0.191	0.222843	0.1064	0.3611	0.1066	0.2837	0.2004	0.09	0.36	0.12	0.26	0.1467	0.36	0.61	T	0.0	B	0.001	B	0.004	N	1.000	P	0.265	N	1.43	T	-0.907	T	0.000	T	0.003	-0.094	3.539	2.21	0.378	0.748	6.642	-0.094007	NA	1	0.101512	0.248525	ID=COSM150479;OCCURENCE=1(stomach)	0.246	NA	8.9787214
754	14	24533539	24533539	C	A	exonic	LRRC16B	NA	nonsynonymous SNV	LRRC16B:NM_138360:exon32:c.C3064A:p.L1022M	exonic	ENSG00000186648	NA	nonsynonymous SNV	ENSG00000186648:ENST00000334420:exon32:c.C352A:p.L118M,ENSG00000186648:ENST00000342740:exon32:c.C3064A:p.L1022M	Score=568;Name=lod=271	NA	14q11.2	NA	NA	NA	NA	rs10146906	0.36	0.36	0.353	0.348642	0.4632	0.0437	0.4553	0.4955	0.271	0.48	0.04	0.44	0.48	0.4383	0.49	0.64	T	0.0	B	0.001	B	0.000	N	1.000	P	-0.06	N	0.94	T	-0.925	T	0.000	T	0.108	1.658	11.5	5.28	0.852	2.101	9.854	1.658049	1.658049	0.29	0.453372	0.486609	NA	0.406	NA	8.9784614
754	1	209950760	209950760	C	G	exonic	TRAF3IP3	NA	nonsynonymous SNV	TRAF3IP3:NM_025228:exon12:c.C1117G:p.Q373E	exonic	ENSG00000009790	NA	nonsynonymous SNV	ENSG00000009790:ENST00000367023:exon5:c.C325G:p.Q109E,ENSG00000009790:ENST00000477431:exon5:c.C325G:p.Q109E,ENSG00000009790:ENST00000010338:exon10:c.C1057G:p.Q353E,ENSG00000009790:ENST00000367024:exon12:c.C1117G:p.Q373E,ENSG00000009790:ENST00000367025:exon12:c.C1117G:p.Q373E,ENSG00000009790:ENST00000367026:exon12:c.C1057G:p.Q353E,ENSG00000009790:ENST00000400959:exon12:c.C1057G:p.Q353E	Score=440;Name=lod=82	NA	1q32.2	NA	NA	NA	NA	rs669694	0.81	0.81	0.81	0.8123	0.7674	0.8135	0.7781	0.8828	0.7863	0.77	0.82	0.8	0.88	0.7901	0.88	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-1.24	N	-1.0	T	-0.947	T	0.000	T	0.029	0.615	7.311	5.56	1.364	3.830	15.398	0.614941	NA	1	0.798837	0.857467	ID=COSM1127153;OCCURENCE=1(prostate),1(large_intestine)	0.855	NA	8.9769964
754	2	233899126	233899126	C	A	exonic	NEU2	NA	nonsynonymous SNV	NEU2:NM_005383:exon2:c.C502A:p.H168N	exonic	ENSG00000115488	NA	nonsynonymous SNV	ENSG00000115488:ENST00000233840:exon2:c.C502A:p.H168N	NA	NA	2q37.1	Score=752;Name=V$MYOGNF1_01	NA	NA	NA	rs2233391	0.28	0.28	0.253	0.232029	0.502	0.0298	0.3026	0.1626	0.2065	0.51	0.02	0.35	0.16	0.3765	0.51	0.14	T	0.037	B	0.102	B	0.150	N	1.000	P	1.935	M	-2.24	D	-1.012	T	0.000	T	0.018	0.098	4.53	0.688	0.097	0.044	4.060	0.098352	NA	0.93	0.477907	0.213572	NA	0.239	NA	8.9769264
755	22	50716167	50716167	G	A	exonic	PLXNB2	NA	synonymous SNV	PLXNB2:NM_012401:exon33:c.C5049T:p.S1683S	exonic	ENSG00000196576	NA	synonymous SNV	ENSG00000196576:ENST00000359337:exon33:c.C5049T:p.S1683S,ENSG00000196576:ENST00000449103:exon33:c.C5049T:p.S1683S	Score=355;Name=lod=37	NA	22q13.33	NA	NA	NA	NA	rs1127000	0.51	0.51	0.459	0.497404	0.5726	0.6062	0.4755	0.2678	0.6339	0.58	0.61	0.46	0.31	0.556	0.61	0	D	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.964	T	0.000	T	.	-0.726	0.889	-4.29	-1.211	0.078	14.262	-0.726124	NA	NA	0.564467	0.29804	NA	0.377	NA	8.9735996
755	17	72350402	72350402	G	A	exonic	KIF19	NA	nonsynonymous SNV	KIF19:NM_153209:exon18:c.G2410A:p.A804T	exonic	ENSG00000196169	NA	nonsynonymous SNV	ENSG00000196169:ENST00000389916:exon18:c.G2410A:p.A804T	NA	NA	17q25.1	NA	Name=Pol2-4H8,ZNF263,CTCF_(SC-5916),NANOG_(SC-33759),JunD,TCF12,PAX5-C20,CTCF_(C-20),CCNT2,TAF7_(SQ-8),YY1_(C-20),ATF3,SMC3_(ab9263),GABP,Znf143_(16618-1-AP),CTCFL_(SC-98982),CTCF,Rad21	Name=48	NA	rs2271534	0.1	0.1	0.092	0.102835	0.1223	0.0605	0.1427	0.0643	0.1503	0.14	0.05	0.15	0.08	0.1144	0.15	0.64	T	0.001	B	0.001	B	.	.	1.000	P	1.155	L	-0.43	T	-1.097	T	0.001	T	0.024	0.023	4.133	-0.024	0.472	-0.089	0.291	0.022977	NA	0	0.123055	0.083374	ID=COSM437308;OCCURENCE=2(breast)	0.058	NA	8.9735784
755	15	33954652	33954652	C	T	exonic	RYR3	NA	nonsynonymous SNV	RYR3:NM_001036:exon35:c.C4921T:p.R1641C,RYR3:NM_001243996:exon35:c.C4921T:p.R1641C	exonic	ENSG00000198838	NA	nonsynonymous SNV	ENSG00000198838:ENST00000389232:exon35:c.C4921T:p.R1641C,ENSG00000198838:ENST00000415757:exon35:c.C4921T:p.R1641C	Score=472;Name=lod=110	NA	15q14	Score=887;Name=V$CREL_01	NA	NA	NA	rs4780144	0.86	0.86	0.85	0.838259	0.9622	0.9246	0.9207	0.556	0.9448	0.97	0.92	0.9	0.57	0.9339	0.97	0.05	D	0.99	D	0.582	P	0.229	N	0.004	P	1.39	L	-0.74	T	-1.004	T	0.000	T	0.058	1.375	10.53	0.853	0.360	-0.113	5.527	1.374749	1.374749	0.06	0.964054	0.665822	NA	0.848	NA	8.9731794
755	8	7218752	7218752	G	C	exonic	ZNF705G	NA	nonsynonymous SNV	ZNF705G:NM_001164457:exon2:c.C19G:p.L7V	exonic	ENSG00000215372	NA	nonsynonymous SNV	ENSG00000215372:ENST00000400078:exon2:c.C19G:p.L7V,ENSG00000215372:ENST00000400156:exon4:c.C19G:p.L7V	Score=429;Name=lod=74	NA	8p23.1	NA	NA	Name=17	NA	rs3989697	0.27	0.27	0.226	NA	NA	NA	NA	NA	NA	0.24	0.21	0.32	0.36	0.3609	0.36	1	T	.	.	.	.	.	.	1.000	P	-1.56	N	5.86	T	-0.978	T	0.000	T	0.026	-3.595	0.001	1.24	0.119	0.023	2.834	-3.595236	NA	1	NA	NA	NA	0.043	NA	8.9724334
755	4	55139771	55139771	T	C	exonic	PDGFRA	NA	nonsynonymous SNV	PDGFRA:NM_006206:exon10:c.T1432C:p.S478P	exonic	ENSG00000134853	NA	nonsynonymous SNV	ENSG00000134853:ENST00000257290:exon10:c.T1432C:p.S478P,ENSG00000134853:ENST00000509490:exon10:c.T1432C:p.S478P	NA	NA	4q12	NA	NA	NA	NA	rs35597368	0.17	0.17	0.152	0.199281	0.1074	0.1706	0.2406	0.2443	0.2331	0.12	0.17	0.2	0.21	0.1516	0.24	0.85	T	0.0	B	0.0	B	0.234	N	1.000	P	0	N	-0.95	T	-1.098	T	0.000	T	0.092	-0.613	1.271	0.811	0.048	-1.239	6.025	-0.613017	NA	0.29	0.102558	0.225828	NA	0.232	CLINSIG=non-pathogenic|untested;CLNDBN=not_provided|not_specified;CLNREVSTAT=single|not;CLNACC=RCV000034716.1|RCV000121780.1;CLNDSDB=.|.;CLNDSDBID=.|.	8.9717754
755	16	88780175	88780175	G	A	exonic	CTU2	NA	nonsynonymous SNV	CTU2:NM_001012759:exon9:c.G994A:p.V332I,CTU2:NM_001012762:exon9:c.G994A:p.V332I	exonic	ENSG00000174177	NA	nonsynonymous SNV	ENSG00000174177:ENST00000378384:exon8:c.G733A:p.V245I,ENSG00000174177:ENST00000312060:exon9:c.G994A:p.V332I,ENSG00000174177:ENST00000453996:exon9:c.G994A:p.V332I,ENSG00000174177:ENST00000567949:exon9:c.G1207A:p.V403I	NA	NA	16q24.3	NA	NA	NA	NA	rs4782321	0.07	0.07	0.071	0.0393371	0.1282	NA	0.0375	0.0234	0.0112	0.15	NA	0.04	0.03	0.0972	0.15	0.63	T	0.029	B	0.006	B	0.075	N	1.000	P	-0.475	N	0.95	T	-1.042	T	0.000	T	0.049	-0.326	2.451	-5.78	-1.464	-0.746	3.893	-0.326271	NA	0.44	0.136226	0.035308	NA	0.036	NA	8.9717074
755	11	99690461	99690461	A	G	exonic	CNTN5	NA	nonsynonymous SNV	CNTN5:NM_001243270:exon3:c.A242G:p.N81S,CNTN5:NM_001243271:exon4:c.A242G:p.N81S,CNTN5:NM_014361:exon4:c.A242G:p.N81S	exonic	ENSG00000149972	NA	nonsynonymous SNV	ENSG00000149972:ENST00000279463:exon2:c.A242G:p.N81S,ENSG00000149972:ENST00000528682:exon3:c.A242G:p.N81S,ENSG00000149972:ENST00000524871:exon4:c.A242G:p.N81S,ENSG00000149972:ENST00000527185:exon4:c.A242G:p.N81S	Score=510;Name=lod=157	NA	11q22.1	NA	NA	NA	NA	rs10893933	NA	NA	0.149	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3617	0.12	0.78	T	0.036	B	0.012	B	0.534	N	0.000	P	0.55	N	0.67	T	-0.970	T	0.080	T	0.347	0.35	5.9	1.42	0.128	2.566	8.939	0.350168	NA	0.33	NA	NA	NA	0.116	NA	8.9716334
755	17	61901197	61901197	T	A	exonic	FTSJ3	NA	nonsynonymous SNV	FTSJ3:NM_017647:exon13:c.A1270T:p.S424C	exonic	ENSG00000108592	NA	nonsynonymous SNV	ENSG00000108592:ENST00000579831:exon1:c.A55T:p.S19C,ENSG00000108592:ENST00000427159:exon13:c.A1270T:p.S424C	Score=503;Name=lod=147	NA	17q23.3	NA	NA	NA	NA	rs2727288	0.68	0.68	0.693	0.726438	0.5984	0.5556	0.6787	0.9569	0.7566	0.6	0.58	0.63	0.96	0.658	0.96	0.01	D	0.681	P	0.215	B	0.002	N	1.000	P	0.345	N	1.42	T	-1.032	T	0.000	T	0.141	0.477	6.589	4.68	0.948	0.028	8.945	0.477083	NA	0.01	0.606512	0.894235	NA	0.674	NA	8.9704214
755	4	90170118	90170118	A	G	exonic	GPRIN3	NA	nonsynonymous SNV	GPRIN3:NM_198281:exon2:c.T1144C:p.S382P	exonic	ENSG00000185477	NA	nonsynonymous SNV	ENSG00000185477:ENST00000333209:exon2:c.T1144C:p.S382P	NA	NA	4q22.1	NA	NA	NA	NA	rs28622301	0.1	0.1	0.086	0.108027	0.1302	0.123	0.0893	0.0068	0.2198	0.13	0.14	0.11	0.01	0.1216	0.14	0.22	T	0.002	B	0.004	B	0.242	N	1.000	P	0.46	N	2.67	T	-1.022	T	0.000	T	0.022	1.932	12.42	-8.98	-1.809	-0.622	11.105	1.931922	1.931922	0.2	0.112093	0.021335	ID=COSM1131000;OCCURENCE=1(prostate)	0.051	NA	8.9694404
755	14	33291494	33291494	C	T	exonic	AKAP6	NA	nonsynonymous SNV	AKAP6:NM_004274:exon13:c.C4475T:p.A1492V	exonic	ENSG00000151320	NA	nonsynonymous SNV	ENSG00000151320:ENST00000280979:exon13:c.C4475T:p.A1492V	NA	NA	14q12	NA	NA	Name=32	NA	rs11845640	0.24	0.24	0.272	0.265375	0.1083	0.2679	0.147	0.4796	0.2188	0.1	0.31	0.11	0.49	0.153	0.49	0.3	T	0.018	B	0.005	B	0.818	N	1.000	P	1.01	L	3.47	T	-0.942	T	0.000	T	0.035	0.122	4.655	2.91	0.771	0.465	8.244	0.121839	NA	0.28	0.102674	0.413527	NA	0.261	NA	8.9693594
755	7	810219	810219	T	C	exonic	HEATR2	NA	nonsynonymous SNV	HEATR2:NM_017802:exon9:c.T1895C:p.V632A	exonic	ENSG00000164818	NA	nonsynonymous SNV	ENSG00000164818:ENST00000403952:exon2:c.T170C:p.V57A,ENSG00000164818:ENST00000297440:exon9:c.T1895C:p.V632A,ENSG00000164818:ENST00000313147:exon9:c.T1895C:p.V632A	Score=313;Name=lod=25	NA	7p22.3	NA	NA	NA	NA	rs4720951	0.42	0.42	0.39	0.391374	0.4632	0.3532	0.4395	0.3578	0.3681	0.45	0.35	0.43	0.44	0.4304	0.47	0.09	T	0.014	B	0.004	B	0.432	N	0.969	P	1.355	L	-0.25	T	-0.970	T	0.000	T	0.401	1.016	9.151	3.55	0.662	3.805	9.728	1.016258	NA	0.15	0.470814	0.356105	NA	0.355	NA	8.9689194
755	8	41525914	41525914	C	T	exonic	ANK1	NA	synonymous SNV	ANK1:NM_000037:exon39:c.G5265A:p.V1755V,ANK1:NM_020475:exon39:c.G5265A:p.V1755V,ANK1:NM_020476:exon39:c.G5265A:p.V1755V,ANK1:NM_020477:exon39:c.G4779A:p.V1593V,ANK1:NM_001142446:exon40:c.G5388A:p.V1796V	exonic	ENSG00000029534	NA	synonymous SNV	ENSG00000029534:ENST00000289734:exon39:c.G5265A:p.V1755V,ENSG00000029534:ENST00000347528:exon39:c.G5265A:p.V1755V,ENSG00000029534:ENST00000352337:exon39:c.G5265A:p.V1755V,ENSG00000029534:ENST00000379758:exon39:c.G5265A:p.V1755V,ENSG00000029534:ENST00000396942:exon39:c.G5265A:p.V1755V,ENSG00000029534:ENST00000396945:exon39:c.G5265A:p.V1755V,ENSG00000029534:ENST00000265709:exon40:c.G5388A:p.V1796V	NA	NA	8p11.21	NA	NA	Name=2	NA	rs750625	0.2	0.2	0.19	0.194688	0.2406	0.1409	0.2147	0.1936	0.1902	0.21	0.14	0.26	0.21	0.2134	0.26	0.14	T	.	.	.	.	0.813	N	1.000	P	.	.	-0.25	T	-1.089	T	0.000	T	.	-1.312	0.035	2.34	0.532	1.235	7.281	-1.311843	NA	NA	0.245	0.204267	NA	0.261	NA	8.9676666
756	6	30041009	30041009	A	G	exonic	RNF39	NA	nonsynonymous SNV	RNF39:NM_025236:exon3:c.T607C:p.S203P,RNF39:NM_170769:exon3:c.T607C:p.S203P	exonic	ENSG00000204618	NA	nonsynonymous SNV	ENSG00000204618:ENST00000244360:exon3:c.T607C:p.S203P,ENSG00000204618:ENST00000376751:exon3:c.T607C:p.S203P	NA	NA	6p22.1	NA	NA	NA	NA	rs2074479	0.18	0.18	0.197	0.191294	0.0954	0.1905	0.1744	0.2988	0.1575	0.09	0.2	0.2	0.3	0.1539	0.3	0.59	T	0.0	B	0.0	B	0.370	N	1.000	P	-0.695	N	0.04	T	-1.079	T	0.046	T	0.069	-1.893	0.008	3.99	1.050	0.836	7.844	-1.89338	NA	1	0.11997	0.25546	NA	0.167	NA	8.9640634
756	2	71058835	71058835	A	G	exonic	CD207	NA	nonsynonymous SNV	CD207:NM_015717:exon5:c.T833C:p.V278A	exonic	ENSG00000116031	NA	nonsynonymous SNV	ENSG00000116031:ENST00000410009:exon5:c.T833C:p.V278A	NA	NA	2p13.3	NA	NA	NA	NA	rs741326	0.54	0.54	0.542	0.545327	0.4722	0.6548	0.4813	0.5219	0.5849	0.48	0.69	0.44	0.53	0.4755	0.69	0.5	T	0.0	B	0.0	B	0.152	N	1.000	P	-1.27	N	2.33	T	-0.960	T	0.000	T	0.082	-1.206	0.069	-9.57	-2.881	-1.932	1.358	-1.205573	NA	0.75	0.423646	0.465037	NA	0.449	NA	8.9619874
756	5	134076812	134076812	G	A	exonic	CAMLG	NA	nonsynonymous SNV	CAMLG:NM_001745:exon2:c.G232A:p.V78I	exonic	ENSG00000164615	NA	nonsynonymous SNV	ENSG00000164615:ENST00000297156:exon2:c.G232A:p.V78I	NA	NA	5q31.1	NA	NA	NA	NA	rs12657663	0.15	0.15	0.13	0.146565	0.1332	0.2808	0.1787	0.0136	0.1789	0.13	0.29	0.14	0.02	0.136	0.29	0.96	T	0.0	B	0.001	B	0.561	N	1.000	P	0.205	N	1.51	T	-1.066	T	0.000	T	0.004	0.199	5.074	-11.7	-3.248	-1.489	3.592	0.199353	NA	0.91	0.102907	0.02542	NA	0.058	NA	8.9612264
756	19	50453317	50453317	C	T	exonic	SIGLEC11	NA	synonymous SNV	SIGLEC11:NM_001135163:exon10:c.G1719A:p.S573S,SIGLEC11:NM_052884:exon11:c.G2007A:p.S669S	exonic	ENSG00000161640	NA	synonymous SNV	ENSG00000161640:ENST00000426971:exon10:c.G1719A:p.S573S,ENSG00000161640:ENST00000447370:exon11:c.G2007A:p.S669S	NA	NA	19q13.33	NA	NA	NA	NA	rs9304690	0.22	0.22	0.211	0.205072	0.2396	0.2619	0.1643	0.0779	0.3119	0.26	0.27	0.21	0.1	0.2268	0.27	.	.	.	.	.	.	.	.	0.042	P	.	.	.	.	-0.967	T	0.000	T	.	-0.09	3.56	-7.29	-1.620	-3.084	1.013	-0.089762	NA	NA	0.239302	0.103315	ID=COSM1395376;OCCURENCE=1(large_intestine)	0.225	NA	8.9609646
756	2	160711045	160711045	G	C	exonic	LY75,LY75-CD302	NA	nonsynonymous SNV	LY75-CD302:NM_001198759:exon18:c.C2421G:p.D807E,LY75-CD302:NM_001198760:exon18:c.C2421G:p.D807E,LY75:NM_002349:exon18:c.C2421G:p.D807E	exonic	ENSG00000054219,ENSG00000248672	NA	nonsynonymous SNV	ENSG00000054219:ENST00000263636:exon18:c.C2421G:p.D807E,ENSG00000248672:ENST00000504764:exon18:c.C2421G:p.D807E,ENSG00000248672:ENST00000505052:exon18:c.C2421G:p.D807E,ENSG00000054219:ENST00000553424:exon18:c.C2421G:p.D807E,ENSG00000054219:ENST00000554112:exon18:c.C2421G:p.D807E	Score=551;Name=lod=232	NA	2q24.2	NA	NA	NA	NA	rs3951216	0.52	0.52	0.496	0.565895	0.4304	0.7093	0.5778	0.3896	0.7873	0.43	0.72	0.56	0.39	0.5067	0.72	1	T	0.002	B	0.004	B	0.078	N	0.999	P	-0.84	N	3.05	T	-0.991	T	0.000	T	0.054	-0.439	1.959	3.67	0.715	1.124	7.517	-0.439447	NA	0.93	0.437791	0.389923	NA	0.486	NA	8.9584424
756	19	57036653	57036653	G	A	exonic	ZNF471	NA	nonsynonymous SNV	ZNF471:NM_020813:exon5:c.G1217A:p.G406D	exonic	ENSG00000196263	NA	nonsynonymous SNV	ENSG00000196263:ENST00000308031:exon5:c.G1217A:p.G406D	NA	NA	19q13.43	NA	Name=ZNF274,SETDB1	NA	NA	rs3752176	0.4	0.4	0.413	0.38139	0.4891	0.2292	0.3213	0.4289	0.4059	0.48	0.24	0.39	0.46	0.4146	0.48	0.18	T	0.002	B	0.001	B	.	.	1.000	P	-0.47	N	3.21	T	-0.947	T	0.000	T	0.031	0.373	6.025	3.35	0.388	-1.550	3.229	0.372926	NA	0.53	0.471512	0.45892	NA	0.449	NA	8.9581214
756	9	90501514	90501514	C	G	exonic	SPATA31E1	NA	nonsynonymous SNV	SPATA31E1:NM_178828:exon4:c.C2112G:p.D704E	exonic	ENSG00000177992	NA	nonsynonymous SNV	ENSG00000177992:ENST00000325643:exon4:c.C2112G:p.D704E	NA	NA	9q22.1	NA	NA	NA	NA	rs4076794	0.29	0.29	0.299	0.297923	0.1103	0.253	0.2882	0.6142	0.1166	0.12	0.25	0.26	0.62	0.1707	0.62	1	T	0.005	B	0.002	B	0.000	N	1.000	P	0.695	N	3.33	T	-0.925	T	0.000	T	0.025	-1.758	0.01	-3.84	-1.590	0.004	1.959	-1.758496	NA	1	0.094441	0.53291	NA	0.225	NA	8.9578924
756	8	7215694	7215694	A	G	exonic	ZNF705G	NA	nonsynonymous SNV	ZNF705G:NM_001164457:exon5:c.T707C:p.V236A	exonic	ENSG00000215372	NA	nonsynonymous SNV	ENSG00000215372:ENST00000400078:exon5:c.T707C:p.V236A,ENSG00000215372:ENST00000400156:exon7:c.T707C:p.V236A	Score=355;Name=lod=37	NA	8p23.1	NA	NA	Name=2	NA	rs9693671	NA	NA	0.341	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3771	0.12	1	T	.	.	.	.	.	.	1.000	P	-0.16	N	2.35	T	-0.934	T	0.014	T	0.037	-2.447	0.003	0.049	-0.499	0.108	4.184	-2.447359	NA	1	NA	NA	NA	0.109	NA	8.9562334
756	10	30728101	30728101	T	C	exonic	MAP3K8	NA	synonymous SNV	MAP3K8:NM_001244134:exon2:c.T234C:p.Y78Y,MAP3K8:NM_005204:exon3:c.T234C:p.Y78Y	exonic	ENSG00000107968	NA	synonymous SNV	ENSG00000107968:ENST00000375321:exon1:c.T234C:p.Y78Y,ENSG00000107968:ENST00000413724:exon2:c.T234C:p.Y78Y,ENSG00000107968:ENST00000415139:exon2:c.T234C:p.Y78Y,ENSG00000107968:ENST00000542547:exon2:c.T234C:p.Y78Y,ENSG00000107968:ENST00000263056:exon3:c.T234C:p.Y78Y,ENSG00000107968:ENST00000375322:exon3:c.T234C:p.Y78Y	Score=389;Name=lod=51	Name=Inflammatory bowel disease	10p11.23	Score=935;Name=V$LMO2COM_02	Name=Pol2-4H8	Name=4	NA	rs1042058	0.43	0.43	0.398	0.352835	0.6044	0.3492	0.5187	0.0976	0.3252	0.61	0.39	0.51	0.13	0.5028	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.127712	NA	NA	0.603256	0.157512	NA	0.384	NA	8.9562106
756	1	206603535	206603535	G	A	exonic	SRGAP2	NA	unknown	UNKNOWN	exonic	ENSG00000163486	NA	synonymous SNV	ENSG00000163486:ENST00000439126:exon5:c.G360A:p.L120L,ENSG00000163486:ENST00000414007:exon10:c.G1098A:p.L366L	Score=629;Name=lod=481	NA	1q32.1	NA	Name=CTCF,STAT3	Name=108	NA	rs2297539	0.52	0.52	0.479	0.52496	0.4334	0.7024	0.5634	0.4175	0.5542	0.42	0.71	0.56	0.41	0.4929	0.71	.	.	.	.	.	.	.	.	0.711	P	.	.	.	.	-0.990	T	0.000	T	.	1.205	9.896	1.62	0.796	1.440	4.596	1.205469	NA	NA	0.451804	0.404524	ID=COSM1338270;OCCURENCE=1(large_intestine)	0.377	NA	8.9552293
757	10	17147521	17147521	G	T	exonic	CUBN	NA	nonsynonymous SNV	CUBN:NM_001081:exon11:c.C1165A:p.P389T	exonic	ENSG00000107611	NA	nonsynonymous SNV	ENSG00000107611:ENST00000377833:exon11:c.C1165A:p.P389T	Score=412;Name=lod=63	NA	10p13	NA	NA	NA	NA	rs1801224	0.56	0.56	0.532	0.534345	0.5875	0.6558	0.6009	0.3676	0.5327	0.57	0.64	0.61	0.42	0.6138	0.68	0.02	D	0.666	P	0.212	B	0.413	N	0.000	P	1.67	L	1.02	T	-0.971	T	0.000	T	0.034	2.415	14.04	1.37	0.296	3.034	5.465	2.415303	2.415303	0.17	0.677093	0.412846	NA	0.536	NA	8.9549404
757	19	15905289	15905289	G	T	exonic	OR10H5	NA	nonsynonymous SNV	OR10H5:NM_001004466:exon1:c.G431T:p.R144L	exonic	ENSG00000172519	NA	nonsynonymous SNV	ENSG00000172519:ENST00000308940:exon1:c.G431T:p.R144L	NA	NA	19p13.12	NA	NA	NA	NA	rs61754873	0.1	0.1	0.089	0.0938498	0.1312	0.0635	0.1081	0.0938	0.0767	0.13	0.07	0.13	0.09	0.1136	0.13	1	T	0.0	B	0.0	B	0.001	N	1.000	P	-3.435	N	1.55	T	-1.008	T	0.000	T	0.073	-1.7	0.011	3.36	0.487	2.214	6.771	-1.70017	NA	1	0.134884	0.093509	NA	0.029	NA	8.9536494
757	17	39580559	39580559	T	A	exonic	KRT37	NA	nonsynonymous SNV	KRT37:NM_003770:exon1:c.A217T:p.S73C	exonic	ENSG00000108417	NA	nonsynonymous SNV	ENSG00000108417:ENST00000225550:exon1:c.A217T:p.S73C	Score=295;Name=lod=21	NA	17q21.2	NA	NA	NA	NA	rs9916475	0.37	0.37	0.317	0.391374	0.4592	0.4067	0.3415	0.1846	0.6207	0.45	0.4	0.4	0.21	0.4372	0.49	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-2.305	N	-1.49	T	-0.927	T	0.000	T	0.061	0.26	5.406	4.69	0.661	1.043	2.665	0.260139	NA	1	0.485698	0.223559	NA	0.348	NA	8.9512354
757	17	27225586	27225586	A	T	exonic	DHRS13	NA	nonsynonymous SNV	DHRS13:NM_144683:exon5:c.T1007A:p.L336Q	exonic	ENSG00000167536	NA	nonsynonymous SNV	ENSG00000167536:ENST00000426464:exon3:c.T764A:p.L255Q,ENSG00000167536:ENST00000394901:exon4:c.T857A:p.L286Q,ENSG00000167536:ENST00000378895:exon5:c.T1007A:p.L336Q	NA	NA	17q11.2	NA	NA	NA	NA	rs4795472	0.13	0.13	0.124	0.11881	0.1282	0.0506	0.1124	0.202	0.0716	0.11	0.07	0.14	0.22	0.1269	0.22	0.31	T	0.012	B	0.005	B	0.089	N	1.000	P	0.205	N	-1.11	T	-1.047	T	0.000	T	0.049	0.055	4.298	-10.1	-2.676	-1.687	5.237	0.054624	NA	0.1	0.127442	0.187245	NA	0.145	NA	8.9507914
757	7	76069902	76069902	G	C	exonic	ZP3	NA	nonsynonymous SNV	ZP3:NM_001110354:exon7:c.G1034C:p.R345T,ZP3:NM_007155:exon8:c.G881C:p.R294T	exonic	ENSG00000188372	NA	nonsynonymous SNV	ENSG00000188372:ENST00000416245:exon6:c.G506C:p.R169T,ENSG00000188372:ENST00000394857:exon7:c.G1034C:p.R345T,ENSG00000188372:ENST00000336517:exon8:c.G881C:p.R294T	NA	NA	7q11.23	NA	NA	NA	NA	rs1804905	NA	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3832	NA	0.6	T	0.039	B	0.019	B	0.499	U	1.000	N	0.83	L	2.63	T	-0.987	T	0.030	T	0.287	0.888	8.608	-8.56	-1.616	-0.592	12.211	0.888351	NA	0.25	NA	NA	NA	NA	NA	8.9501334
757	16	57738810	57738810	T	A	exonic	CCDC135	NA	nonsynonymous SNV	CCDC135:NM_032269:exon6:c.T722A:p.V241E	exonic	ENSG00000159625	NA	nonsynonymous SNV	ENSG00000159625:ENST00000336825:exon5:c.T527A:p.V176E,ENSG00000159625:ENST00000394337:exon6:c.T722A:p.V241E,ENSG00000159625:ENST00000360716:exon7:c.T722A:p.V241E	NA	NA	16q21	NA	NA	NA	NA	rs58373934	0.08	0.08	0.082	0.0666933	0.1402	0.001	0.0692	0.0696	0.0532	0.15	0.0017	0.07	0.08	0.1083	0.15	0.92	T	0.012	B	0.005	B	0.380	N	1.000	P	0.55	N	-0.8	T	-1.095	T	0.001	T	0.1	0.515	6.791	-2.11	-0.145	-1.069	4.974	0.514952	NA	0.26	0.135349	0.070291	NA	0.08	NA	8.9494844
757	16	71411636	71411636	G	A	exonic	CALB2	NA	nonsynonymous SNV	CALB2:NM_001740:exon4:c.G328A:p.A110T,CALB2:NM_007088:exon4:c.G328A:p.A110T	exonic	ENSG00000172137	NA	nonsynonymous SNV	ENSG00000172137:ENST00000302628:exon4:c.G328A:p.A110T,ENSG00000172137:ENST00000349553:exon4:c.G328A:p.A110T	Score=571;Name=lod=279	NA	16q22.2	Score=918;Name=V$ZID_01	NA	NA	NA	rs11545954	0.12	0.12	0.132	0.13778	0.1292	0.0298	0.1052	0.1861	0.2157	0.12	0.04	0.14	0.21	0.1256	0.21	0.31	T	0.005	B	0.006	B	0.083	N	0.945	P	1.285	L	-0.33	T	-1.088	T	0.000	T	0.233	1.247	10.06	1.17	0.057	0.203	7.991	1.246691	1.246691	0.25	0.129884	0.170837	NA	0.138	NA	8.9486494
757	11	499120	499120	G	A	exonic	RNH1	NA	nonsynonymous SNV	RNH1:NM_203384:exon5:c.C509T:p.P170L,RNH1:NM_203385:exon5:c.C509T:p.P170L,RNH1:NM_203388:exon5:c.C509T:p.P170L,RNH1:NM_203389:exon5:c.C509T:p.P170L,RNH1:NM_002939:exon6:c.C509T:p.P170L,RNH1:NM_203383:exon6:c.C509T:p.P170L,RNH1:NM_203386:exon6:c.C509T:p.P170L,RNH1:NM_203387:exon6:c.C509T:p.P170L	exonic	ENSG00000023191	NA	nonsynonymous SNV	ENSG00000023191:ENST00000534797:exon4:c.C509T:p.P170L,ENSG00000023191:ENST00000356187:exon5:c.C509T:p.P170L,ENSG00000023191:ENST00000397604:exon5:c.C509T:p.P170L,ENSG00000023191:ENST00000397614:exon5:c.C509T:p.P170L,ENSG00000023191:ENST00000438658:exon5:c.C509T:p.P170L,ENSG00000023191:ENST00000527485:exon5:c.C509T:p.P170L,ENSG00000023191:ENST00000529115:exon5:c.C433T:p.R145W,ENSG00000023191:ENST00000529368:exon5:c.C509T:p.P170L,ENSG00000023191:ENST00000354420:exon6:c.C509T:p.P170L,ENSG00000023191:ENST00000397615:exon6:c.C509T:p.P170L,ENSG00000023191:ENST00000529306:exon6:c.C509T:p.P170L,ENSG00000023191:ENST00000533410:exon6:c.C509T:p.P170L	NA	NA	11p15.5	NA	NA	NA	NA	rs17585	0.09	0.09	0.071	0.0872604	0.1352	0.003	0.0879	0.0756	0.1401	0.13	0.01	0.12	0.1	0.1139	0.14	0.08	T	0.015	B	0.002	B	0.101	N	1.000	P	1.905	M	1.03	T	-1.057	T	0.001	T	0.337	2.788	15.28	-2.59	-0.238	-0.054	1.319	2.788088	2.788088	0.14	0.136163	0.091466	NA	0.167	NA	8.9480704
757	4	68380215	68380215	G	A	exonic	CENPC1	NA	nonsynonymous SNV	CENPC1:NM_001812:exon8:c.C1021T:p.L341F	exonic	ENSG00000145241	NA	nonsynonymous SNV	ENSG00000145241:ENST00000513216:exon4:c.C742T:p.L248F,ENSG00000145241:ENST00000273853:exon8:c.C1021T:p.L341F,ENSG00000145241:ENST00000506882:exon8:c.C1021T:p.L341F	NA	NA	4q13.2	NA	NA	NA	NA	rs11250	0.69	0.69	0.659	0.700679	0.6252	0.8274	0.7536	0.6195	0.7198	0.61	0.82	0.73	0.62	0.6572	0.82	0.7	T	0.971	D	0.641	P	0.762	N	1.000	P	0.975	L	.	.	-0.952	T	0.000	T	0.069	2.133	13.09	2.53	1.121	0.538	4.593	2.133139	2.133139	0.11	0.603038	0.630757	NA	0.783	NA	8.9478954
757	7	158896517	158896517	G	A	exonic	VIPR2	NA	synonymous SNV	VIPR2:NM_003382:exon4:c.C288T:p.D96D	exonic	ENSG00000106018	NA	synonymous SNV	ENSG00000106018:ENST00000262178:exon4:c.C288T:p.D96D,ENSG00000106018:ENST00000402066:exon4:c.C711T:p.D237D	Score=313;Name=lod=25	NA	7q36.3	NA	NA	NA	NA	rs2270313	0.26	0.26	0.274	0.240815	0.2485	0.1974	0.1873	0.3185	0.2106	0.25	0.22	0.21	0.34	0.2385	0.34	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.016	T	0.000	T	.	-0.981	0.289	-7.55	-1.063	-0.332	9.504	-0.981342	NA	NA	0.231977	0.302769	NA	0.326	NA	8.9476896
757	2	169764176	169764176	G	C	exonic	G6PC2	NA	nonsynonymous SNV	G6PC2:NM_021176:exon5:c.G655C:p.V219L	exonic	ENSG00000152254	NA	nonsynonymous SNV	ENSG00000152254:ENST00000375363:exon5:c.G655C:p.V219L	Score=632;Name=lod=493	NA	2q31.1	NA	NA	NA	NA	rs492594	0.44	0.44	0.401	0.463458	0.4443	0.4335	0.5634	0.3101	0.6503	0.45	0.44	0.56	0.34	0.4865	0.56	1	T	0.0	B	0.0	B	0.120	N	0.000	P	-0.775	N	-0.83	T	-0.937	T	0.000	T	0.057	-0.375	2.235	3.06	0.398	2.141	5.621	-0.375122	NA	1	0.456163	0.32138	ID=COSM148982;OCCURENCE=1(stomach)	0.435	NA	8.9463704
757	17	73780813	73780813	A	G	upstream	MIR4738,UNK	NA	NA	NA	exonic	ENSG00000132478	NA	nonsynonymous SNV	ENSG00000132478:ENST00000293218:exon2:c.A80G:p.D27G	NA	NA	17q25.1	NA	Name=p300,CHD2_(N-1250),GTF2F1_(RAP-74),CEBPB,RXRA,ELF1_(SC-631),STAT1,TCF4,SP1,ATF3,Pol2,USF1_(SC-8983),TR4,YY1_(C-20),Znf143_(16618-1-AP),GATA-1,SREBP1,ZBTB33,GABP,USF-1,Nrf1,TCF12,IRF1,TBP,NFKB,c-Myc,SIX5,SRF,STAT3,HA-E2F1,FOSL2,ELK4	Name=148	NA	rs147842313	0.01	0.01	0.011	0.00678914	0.0219	NA	0.0144	NA	0.002	0.02	NA	0.01	NA	0.0125	0.02	0.15	T	.	.	.	.	.	.	1.000	N	.	.	.	.	-0.975	T	0.048	T	0.057	2.089	12.94	-2.71	-0.267	-0.085	7.985	2.088563	2.088563	NA	0.019729	0.003145	NA	0.007	NA	8.945871
757	4	186379735	186379735	T	C	exonic	CCDC110	NA	nonsynonymous SNV	CCDC110:NM_001145411:exon5:c.A1895G:p.Q632R,CCDC110:NM_152775:exon6:c.A2006G:p.Q669R	exonic	ENSG00000168491	NA	nonsynonymous SNV	ENSG00000168491:ENST00000393540:exon5:c.A1895G:p.Q632R,ENSG00000168491:ENST00000307588:exon6:c.A2006G:p.Q669R,ENSG00000168491:ENST00000510617:exon6:c.A2006G:p.Q669R	NA	NA	4q35.1	NA	NA	NA	NA	rs6827370	0.19	0.19	0.173	0.213259	0.1223	0.2698	0.1599	0.2965	0.1738	0.13	0.22	0.12	0.31	0.1563	0.31	0.56	T	0.026	B	0.018	B	0.159	N	1.000	P	1.085	L	1.45	T	-0.946	T	0.000	T	0.026	0.522	6.827	3.02	0.438	1.465	8.234	0.521826	NA	0.85	0.109171	0.287369	NA	0.145	NA	8.9455624
757	17	39261933	39261933	C	T	exonic	KRTAP4-9	NA	nonsynonymous SNV	KRTAP4-9:NM_001146041:exon1:c.C293T:p.A98V	exonic	ENSG00000212722	NA	nonsynonymous SNV	ENSG00000212722:ENST00000391415:exon1:c.C293T:p.A98V	NA	NA	17q21.2	NA	NA	Name=3	NA	rs7207685	NA	NA	0.637	0.675519	0.7147	0.4028	0.6787	0.9501	0.5429	NA	NA	NA	NA	0.6732	0.011	1	T	0.0	B	0.0	B	0.000	U	1.000	P	-1.08	N	1.49	T	-0.991	T	0.022	T	0.126	-1.019	0.233	-2.04	-0.852	-6.039	5.086	-1.019148	NA	0.92	NA	NA	NA	0.007	NA	8.9454334
757	12	11183217	11183217	C	T	exonic	TAS2R31	NA	nonsynonymous SNV	TAS2R31:NM_176885:exon1:c.G718A:p.V240I	exonic	ENSG00000256436	NA	nonsynonymous SNV	ENSG00000256436:ENST00000390675:exon1:c.G718A:p.V240I	NA	NA	12p13.2	NA	NA	NA	NA	rs10772423	0.39	0.39	0.362	0.335264	0.4801	0.1944	0.4568	0.3427	0.2352	0.5	0.25	0.42	0.35	0.4251	0.5	1	T	0.002	B	0.002	B	.	.	1.000	P	-0.76	N	1.25	T	-0.983	T	0.000	T	0.021	-1.651	0.012	-4.77	-1.565	-4.168	3.216	-1.651065	NA	NA	0.482907	0.360191	NA	0.377	NA	8.9452264
758	14	22133648	22133648	G	A	exonic	OR4E2	NA	nonsynonymous SNV	OR4E2:NM_001001912:exon1:c.G352A:p.V118M	exonic	ENSG00000221977	NA	nonsynonymous SNV	ENSG00000221977:ENST00000408935:exon1:c.G352A:p.V118M	Score=534;Name=lod=198	NA	14q11.2	NA	NA	NA	NA	rs2874103	0.74	0.74	0.767	0.720647	0.8141	0.499	0.7046	0.9463	0.5593	0.82	0.49	0.7	0.93	0.7571	0.93	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-3.91	N	5.7	T	-0.984	T	0.000	T	0.092	-1.42	0.021	5.6	0.955	5.930	9.932	-1.419766	NA	1	0.817675	0.911337	NA	0.797	NA	8.9444584
758	12	54734289	54734289	A	G	exonic	COPZ1	NA	nonsynonymous SNV	COPZ1:NM_001271736:exon2:c.A1G:p.M1V	exonic	ENSG00000111481	NA	nonsynonymous SNV	ENSG00000111481:ENST00000550713:exon1:c.A1G:p.M1V,ENSG00000111481:ENST00000549043:exon2:c.A1G:p.M1V	NA	NA	12q13.13	NA	NA	NA	NA	rs11170877	0.17	0.17	0.159	0.201278	0.1252	0.2222	0.2349	0.2413	0.18	0.12	0.22	0.21	0.16	0.154	0.26	0	D	0.0	B	0.0	B	.	.	1.000	P	.	.	.	.	-1.061	T	0.000	T	0.248	0.619	7.333	2.49	0.206	0.266	4.024	0.619402	NA	NA	0.111395	0.230595	ID=COSN164275;OCCURENCE=1(NS)	0.203	NA	8.9427384
758	10	88717154	88717154	C	T	exonic	MMRN2	NA	nonsynonymous SNV	MMRN2:NM_024756:exon1:c.G145A:p.G49S	exonic	ENSG00000173269	NA	nonsynonymous SNV	ENSG00000173269:ENST00000372027:exon1:c.G145A:p.G49S	NA	NA	10q23.2	NA	NA	NA	NA	rs3750823	0.46	0.46	0.446	0.423522	0.4742	0.7113	0.4179	0.1899	0.3947	0.47	0.71	0.37	0.19	0.4495	0.71	0.82	T	0.001	B	0.0	B	0.183	N	1.000	P	-0.46	N	2.61	T	-0.979	T	0.000	T	0.015	-0.017	3.925	-5.26	-0.985	-1.357	6.089	-0.017394	NA	0.57	0.466977	0.226509	ID=COSM146986;OCCURENCE=1(stomach)	0.42	NA	8.9426564
758	15	42744094	42744094	A	G	exonic	ZNF106	NA	nonsynonymous SNV	ZNF106:NM_022473:exon2:c.T307C:p.W103R	exonic	ENSG00000103994	NA	nonsynonymous SNV	ENSG00000103994:ENST00000263805:exon2:c.T307C:p.W103R,ENSG00000103994:ENST00000564754:exon5:c.T376C:p.W126R,ENSG00000103994:ENST00000567041:exon5:c.T376C:p.W126R	NA	NA	15q15.1	NA	NA	NA	NA	rs12440118	0.07	0.07	0.065	0.0589058	0.1362	0.006	0.1037	0.0068	0.0726	0.13	NA	0.12	0.01	0.1078	0.15	0.92	T	0.0	B	0.0	B	0.252	N	0.001	P	0.255	N	2.59	T	-0.972	T	0.000	T	0.254	-0.434	1.982	-4.57	-1.037	-0.349	6.078	-0.433843	NA	0.98	0.149802	0.037449	NA	0.08	NA	8.9395314
758	9	139840560	139840560	C	A	exonic	C8G	NA	nonsynonymous SNV	C8G:NM_000606:exon4:c.C370A:p.H124N	exonic	ENSG00000176919	NA	nonsynonymous SNV	ENSG00000176919:ENST00000224181:exon4:c.C370A:p.H124N,ENSG00000176919:ENST00000371634:exon4:c.C370A:p.H124N	NA	NA	9q34.3	NA	Name=USF-1	NA	NA	rs17613	0.12	0.12	0.095	0.107827	0.1312	0.0278	0.1066	0.1755	0.0757	0.14	0.03	0.12	0.17	0.1248	0.19	0.34	T	0.001	B	0.003	B	0.066	N	1.000	P	0.69	N	3.21	T	-0.930	T	0.000	T	0.03	1.116	9.553	2.29	0.504	0.407	7.696	1.116446	NA	0.36	0.140447	0.1896	NA	0.072	NA	8.9368864
758	12	132237750	132237750	C	T	exonic	SFSWAP	NA	synonymous SNV	SFSWAP:NM_001261411:exon8:c.C1164T:p.D388D,SFSWAP:NM_004592:exon8:c.C1164T:p.D388D	exonic	ENSG00000061936	NA	synonymous SNV	ENSG00000061936:ENST00000535236:exon6:c.C543T:p.D181D,ENSG00000061936:ENST00000261674:exon8:c.C1164T:p.D388D,ENSG00000061936:ENST00000541286:exon8:c.C1164T:p.D388D	NA	NA	12q24.33	Score=963;Name=V$CDPCR3HD_01	NA	NA	NA	rs1051219	0.13	0.13	0.1	0.102835	0.2565	0.001	0.2147	0.0091	0.0971	0.25	NA	0.26	0.01	0.196	0.28	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.004	T	0.000	T	.	-0.172	3.164	-4.44	-0.865	-0.993	8.718	-0.171526	NA	NA	0.278488	0.047889	NA	0.058	NA	8.9356786
759	11	49227620	49227620	A	G	exonic	FOLH1	NA	nonsynonymous SNV	FOLH1:NM_001014986:exon2:c.T223C:p.Y75H,FOLH1:NM_004476:exon2:c.T223C:p.Y75H,FOLH1:NM_001193471:exon3:c.T178C:p.Y60H,FOLH1:NM_001193472:exon3:c.T178C:p.Y60H	exonic	ENSG00000086205	NA	stoploss	ENSG00000086205:ENST00000525826:exon2:c.T223C:p.X75Q	Score=363;Name=lod=40	NA	11p11.12	Score=885;Name=V$NKX3A_01	NA	NA	NA	rs202676	0.35	0.35	0.346	0.386382	0.2256	0.3155	0.2896	0.6021	0.4018	0.23	0.34	0.27	0.59	0.2822	0.59	0.15	T	0.007	B	0.019	B	0.039	N	0.000	P	0.165	N	1.1	T	-0.941	T	0.000	T	0.214	-0.706	0.951	1.93	0.011	0.183	7.803	-0.706256	NA	0.12	0.224086	0.523864	NA	0.297	NA	8.9347807
759	11	102650424	102650424	C	T	exonic	MMP10	NA	nonsynonymous SNV	MMP10:NM_002425:exon2:c.G158A:p.R53K	exonic	ENSG00000166670	NA	nonsynonymous SNV	ENSG00000166670:ENST00000279441:exon2:c.G158A:p.R53K,ENSG00000166670:ENST00000539681:exon2:c.G158A:p.R53K	NA	NA	11q22.2	NA	NA	NA	NA	rs486055	0.06	0.06	0.062	0.0453275	0.1382	0.001	0.0663	0.0045	0.0358	0.14	NA	0.08	0.0041	0.1056	0.16	1	T	0.033	B	0.038	B	0.002	N	1.000	N	0.305	N	1.44	T	-0.985	T	0.000	T	0.177	0.049	4.269	4.25	2.365	0.542	8.647	0.048987	NA	0.59	0.156199	0.027236	NA	0.029	NA	8.9333344
759	7	138603282	138603282	T	C	exonic	KIAA1549	NA	nonsynonymous SNV	KIAA1549:NM_001164665:exon2:c.A1090G:p.T364A,KIAA1549:NM_020910:exon2:c.A1090G:p.T364A	exonic	ENSG00000122778	NA	nonsynonymous SNV	ENSG00000122778:ENST00000242365:exon1:c.A940G:p.T314A,ENSG00000122778:ENST00000422774:exon2:c.A1090G:p.T364A,ENSG00000122778:ENST00000440172:exon2:c.A1090G:p.T364A	NA	NA	7q34	NA	NA	NA	NA	rs59985563	0.25	0.25	0.256	NA	NA	NA	NA	NA	NA	0.18	0.14	0.16	0.55	0.2178	0.55	0.58	T	0.004	B	0.006	B	0.828	N	1.000	P	0.695	N	1.88	T	-0.907	T	0.000	T	0.026	1.293	10.23	-2.67	-0.209	-1.444	3.949	1.292535	1.292535	0	0.182812	0.473794	ID=COSM1448417,COSM150400;OCCURENCE=1(stomach),1(large_intestine)	0.217	NA	8.9327214
759	4	6600012	6600012	A	G	exonic	MAN2B2	NA	nonsynonymous SNV	MAN2B2:NM_015274:exon9:c.A1336G:p.M446V	exonic	ENSG00000013288	NA	nonsynonymous SNV	ENSG00000013288:ENST00000285599:exon9:c.A1336G:p.M446V,ENSG00000013288:ENST00000504248:exon9:c.A1183G:p.M395V	Score=251;Name=lod=14	NA	4p16.1	NA	NA	NA	NA	rs2301790	0.5	0.5	0.475	0.499401	0.4483	0.6141	0.5101	0.4372	0.5102	0.46	0.62	0.51	0.43	0.4834	0.62	0.84	T	0.0	B	0.0	B	0.000	N	1.000	P	0	N	-0.76	T	-0.939	T	0.000	T	0.273	-1.854	0.009	4.02	0.465	3.887	10.318	-1.853728	NA	1	0.469302	0.455061	ID=COSM448020;OCCURENCE=1(breast),1(central_nervous_system)	0.406	NA	8.9323314
759	5	35910529	35910529	C	T	exonic	CAPSL	NA	nonsynonymous SNV	CAPSL:NM_001042625:exon3:c.G254A:p.R85Q,CAPSL:NM_144647:exon3:c.G254A:p.R85Q	exonic	ENSG00000152611	NA	nonsynonymous SNV	ENSG00000152611:ENST00000397366:exon3:c.G254A:p.R85Q,ENSG00000152611:ENST00000397367:exon3:c.G254A:p.R85Q,ENSG00000152611:ENST00000513623:exon3:c.G254A:p.R85Q,ENSG00000152611:ENST00000514524:exon3:c.G254A:p.R85Q	NA	Name=Type 1 diabetes	5p13.2	Score=742;Name=V$PPARA_01	NA	NA	NA	rs1445898	0.51	0.51	0.479	0.525359	0.4523	0.7609	0.5937	0.2277	0.7117	0.45	0.8	0.56	0.25	0.5051	0.8	0.4	T	0.001	B	0.001	B	0.114	N	1.000	P	0.985	L	-0.67	T	-0.977	T	0.000	T	0.025	-0.211	2.98	0.531	0.016	-1.012	6.870	-0.210599	NA	0.67	0.444302	0.276895	NA	0.522	NA	8.9316314
759	18	44560875	44560875	C	A	exonic	TCEB3B	NA	nonsynonymous SNV	TCEB3B:NM_016427:exon1:c.G761T:p.C254F	exonic	ENSG00000206181	NA	nonsynonymous SNV	ENSG00000206181:ENST00000332567:exon1:c.G761T:p.C254F	NA	NA	18q21.1	NA	NA	NA	NA	rs2010834	0.51	0.51	0.514	0.534145	0.4433	0.6448	0.6239	0.4349	0.5838	0.44	0.63	0.58	0.43	0.5058	0.63	0.44	T	0.115	B	0.03	B	0.040	U	1.000	P	0	N	3.31	T	-0.936	T	0.000	T	0.093	-2.882	0.001	-3.04	-2.994	-1.841	2.302	-2.88178	NA	0.8	0.454535	0.442578	NA	0.42	NA	8.9296984
759	1	248224398	248224398	A	G	exonic	OR2L3	NA	nonsynonymous SNV	OR2L3:NM_001004687:exon1:c.A415G:p.M139V	exonic	ENSG00000198128	NA	nonsynonymous SNV	ENSG00000198128:ENST00000359959:exon1:c.A415G:p.M139V	NA	NA	1q44	NA	NA	NA	NA	rs55937620	0.22	0.22	0.175	0.188498	0.1461	0.255	0.098	0.298	0.0798	0.15	0.31	0.1	0.3	0.1479	0.31	1	T	0.0	B	0.001	B	0.475	N	1.000	P	-1.36	N	8.97	T	-0.939	T	0.000	T	0.017	-2.46	0.003	-2.25	-0.738	-1.463	0.508	-2.460401	NA	1	0.109767	0.224921	NA	0.167	NA	8.9295664
759	19	1042809	1042809	A	G	exonic	ABCA7	NA	nonsynonymous SNV	ABCA7:NM_019112:exon7:c.A563G:p.E188G	exonic	ENSG00000064687	NA	nonsynonymous SNV	ENSG00000064687:ENST00000435683:exon1:c.A149G:p.E50G,ENSG00000064687:ENST00000433129:exon6:c.A563G:p.E188G,ENSG00000064687:ENST00000263094:exon7:c.A563G:p.E188G	NA	NA	19p13.3	NA	NA	Name=14	NA	rs3764645	0.41	0.41	0.357	0.399561	0.4463	0.4355	0.6268	0.1657	0.4693	0.45	0.47	0.6	0.14	0.4838	0.6	0.49	T	0.358	B	0.058	B	.	.	1.000	P	0	N	-2.13	D	-0.953	T	0.000	T	0.127	0.645	7.46	-0.62	-0.436	-1.730	4.106	0.64452	NA	0.32	0.473953	0.222197	NA	0.413	NA	8.9292804
759	15	34638198	34638198	A	G	UTR5	NUTM1	NM_175741:c.-23A>G	NA	NA	exonic	ENSG00000184507	NA	nonsynonymous SNV	ENSG00000184507:ENST00000537011:exon2:c.A62G:p.Q21R	NA	NA	15q14	NA	NA	NA	NA	rs12595504	0.2	0.2	0.181	0.195088	0.1362	0.3363	0.1801	0.1286	0.2106	0.14	0.35	0.17	0.14	0.15	0.35	0.73	T	0.0	B	0.001	B	.	.	1.000	P	.	.	3.28	T	-0.913	T	0.000	T	0.018	-1.282	0.042	-9.83	-2.468	-3.054	5.532	-1.281719	NA	NA	0.117962	0.143344	ID=COSN164891;OCCURENCE=1(NS)	0.109	NA	8.9291714
759	22	41783659	41783659	C	T	exonic	TEF	NA	synonymous SNV	TEF:NM_001145398:exon2:c.C372T:p.T124T,TEF:NM_003216:exon2:c.C462T:p.T154T	exonic	ENSG00000167074	NA	synonymous SNV	ENSG00000167074:ENST00000266304:exon2:c.C462T:p.T154T,ENSG00000167074:ENST00000406644:exon2:c.C372T:p.T124T	Score=454;Name=lod=93	NA	22q13.2	Score=993;Name=V$AREB6_04	NA	NA	NA	rs11546403	0.18	0.18	0.13	0.199481	0.2376	0.0565	0.4409	0.0227	0.3753	0.23	0.06	0.47	0.03	0.2673	0.47	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.901	T	0.000	T	.	1.019	9.161	-3.92	-0.207	-0.492	1.728	1.018676	NA	NA	0.232907	0.053336	NA	0.225	NA	8.9288596
759	14	24662177	24662177	C	T	exonic	TM9SF1	NA	nonsynonymous SNV	TM9SF1:NM_001014842:exon3:c.G644A:p.R215H,TM9SF1:NM_006405:exon3:c.G644A:p.R215H	exonic	ENSG00000100926,ENSG00000254692	NA	nonsynonymous SNV	ENSG00000100926:ENST00000528669:exon2:c.G644A:p.R215H,ENSG00000100926:ENST00000261789:exon3:c.G644A:p.R215H,ENSG00000100926:ENST00000396854:exon3:c.G644A:p.R215H,ENSG00000100926:ENST00000524835:exon3:c.G383A:p.R128H,ENSG00000100926:ENST00000525592:exon3:c.G644A:p.R215H,ENSG00000100926:ENST00000528895:exon3:c.G644A:p.R215H,ENSG00000100926:ENST00000529332:exon3:c.G644A:p.R215H,ENSG00000100926:ENST00000530468:exon3:c.G644A:p.R215H,ENSG00000100926:ENST00000530563:exon3:c.G383A:p.R128H,ENSG00000254692:ENST00000530611:exon7:c.G1271A:p.R424H,ENSG00000100926:ENST00000556387:exon7:c.G1271A:p.R424H	NA	NA	14q12	NA	NA	NA	NA	rs10583	0.07	0.07	0.058	0.0547125	0.1421	0.003	0.1066	0.0053	0.0481	0.14	0.01	0.12	0.01	0.1076	0.15	0.21	T	0.016	B	0.002	B	0.059	N	0.998	P	-0.895	N	0.96	T	-1.029	T	0.000	T	0.294	0.22	5.187	-3.78	-1.011	0.594	11.911	0.220125	NA	0.56	0.154884	0.031094	NA	0.051	NA	8.9287494
759	12	31249861	31249861	C	G	exonic	DDX11	NA	nonsynonymous SNV	DDX11:NM_001257144:exon17:c.C1699G:p.Q567E,DDX11:NM_001257145:exon17:c.C1621G:p.Q541E,DDX11:NM_004399:exon17:c.C1699G:p.Q567E,DDX11:NM_030653:exon17:c.C1699G:p.Q567E,DDX11:NM_152438:exon17:c.C1699G:p.Q567E	exonic	ENSG00000013573	NA	nonsynonymous SNV	ENSG00000013573:ENST00000228264:exon17:c.C1621G:p.Q541E,ENSG00000013573:ENST00000350437:exon17:c.C1699G:p.Q567E,ENSG00000013573:ENST00000407793:exon17:c.C1699G:p.Q567E,ENSG00000013573:ENST00000542838:exon17:c.C1699G:p.Q567E,ENSG00000013573:ENST00000545668:exon17:c.C1699G:p.Q567E	Score=437;Name=lod=80	NA	12p11.21	NA	NA	NA	NA	rs2075322	0.64	0.64	0.591	0.641174	0.4284	0.8294	0.6066	0.708	0.6002	0.43	0.85	0.59	0.75	0.5273	0.85	1	T	0.0	B	0.0	B	0.000	N	0.000	P	.	.	2.46	T	-0.958	T	0.000	T	0.095	-0.771	0.756	2.6	0.170	5.344	10.825	-0.770984	NA	1	0.450698	0.684294	NA	0.536	NA	8.9269354
759	6	31322303	31322303	C	G	exonic	HLA-B	NA	nonsynonymous SNV	HLA-B:NM_005514:exon7:c.G1046C:p.C349S	exonic	ENSG00000234745	NA	nonsynonymous SNV	ENSG00000234745:ENST00000412585:exon7:c.G1046C:p.C349S	NA	NA	6p21.33	NA	Name=Pol2-4H8,Pol2	Name=4	NA	rs2308655	0.57	0.57	0.555	0.592252	0.4503	0.626	0.6167	0.6853	0.5603	0.44	0.6	0.65	0.66	0.5247	0.66	1	T	0.0	B	0.003	B	0.000	N	1.000	P	.	.	5.27	T	-0.976	T	0.001	T	0.125	-0.537	1.559	0.307	-0.358	-2.321	5.655	-0.537263	NA	1	0.43186	0.619837	NA	0.565	NA	8.9264734
759	10	13234356	13234356	A	T	exonic	MCM10	NA	nonsynonymous SNV	MCM10:NM_018518:exon12:c.A1618T:p.T540S,MCM10:NM_182751:exon12:c.A1621T:p.T541S	exonic	ENSG00000065328	NA	nonsynonymous SNV	ENSG00000065328:ENST00000378694:exon11:c.A1618T:p.T540S,ENSG00000065328:ENST00000378714:exon12:c.A1618T:p.T540S,ENSG00000065328:ENST00000484800:exon12:c.A1621T:p.T541S	NA	NA	10p13	NA	NA	NA	NA	rs7905784	0.09	0.09	0.083	0.0640974	0.1431	0.0139	0.0648	0.0688	0.0276	0.15	0.02	0.09	0.08	0.1176	0.15	0.75	T	0.002	B	0.006	B	0.828	N	1.000	P	-0.345	N	1.6	T	-0.972	T	0.000	T	0.02	-1.466	0.019	4.38	0.912	2.074	3.083	-1.465822	NA	0.74	0.146279	0.088062	NA	0.109	NA	8.9263544
760	13	31531009	31531009	G	A	splicing	TEX26	NM_152325:exon4:c.313-1G>A	NA	NA	splicing	ENSG00000175664	ENST00000380473:exon4:c.313-1G>A,ENST00000531960:exon3:c.138-1G>A	NA	NA	NA	NA	13q12.3	NA	NA	Name=2	NA	rs12857479	0.26	0.26	0.225	0.254792	0.3628	0.2946	0.3141	0.0469	0.3415	0.37	0.27	0.32	0.04	0.3419	0.37	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	1.198	9.869	4.71	2.145	2.665	13.163	1.198433	NA	NA	0.370349	0.09941	NA	0.159	NA	8.924951
760	7	73115201	73115201	G	A	intronic	STX1A	NA	NA	NA	exonic	ENSG00000106089	NA	nonsynonymous SNV	ENSG00000106089:ENST00000395155:exon9:c.C739T:p.L247F	Score=243;Name=lod=13	NA	7q11.23	NA	NA	NA	NA	rs41271241	0.09	0.09	0.1	0.0946486	0.0785	0.0198	0.1052	0.177	0.0695	0.08	0.02	0.1	0.17	0.092	0.17	0.01	D	0.01	B	0.009	B	.	.	0.000	P	.	.	1.09	T	-1.080	T	0.000	T	0.178	3.331	17.21	2.42	0.526	0.459	5.429	3.331306	3.331306	0	0.071512	0.166591	NA	0.072	NA	8.9246547
760	11	71259822	71259822	A	G	exonic	KRTAP5-9	NA	nonsynonymous SNV	KRTAP5-9:NM_005553:exon1:c.A119G:p.Y40C	exonic	ENSG00000254997	NA	nonsynonymous SNV	ENSG00000254997:ENST00000528743:exon1:c.A119G:p.Y40C	Score=495;Name=lod=137	NA	11q13.4	NA	NA	Name=12	NA	rs10792769	0.18	0.18	0.188	0.197484	0.1362	0.1329	0.1455	0.4062	0.0818	0.13	0.12	0.14	0.36	0.1494	0.36	1	T	0.0	B	0.001	B	.	.	1.000	P	-3.37	N	4.24	T	-0.942	T	0.000	T	0.065	0.493	6.676	1.57	0.236	0.754	4.115	0.493371	NA	NA	0.123777	0.363182	NA	0.116	NA	8.9239564
760	5	176637240	176637240	G	T	exonic	NSD1	NA	nonsynonymous SNV	NSD1:NM_022455:exon5:c.G1840T:p.V614L,NSD1:NM_172349:exon6:c.G1033T:p.V345L	exonic	ENSG00000165671	NA	nonsynonymous SNV	ENSG00000165671:ENST00000361032:exon2:c.G1531T:p.V511L,ENSG00000165671:ENST00000439151:exon5:c.G1840T:p.V614L,ENSG00000165671:ENST00000347982:exon6:c.G1033T:p.V345L,ENSG00000165671:ENST00000354179:exon6:c.G1033T:p.V345L	NA	NA	5q35.3	NA	NA	NA	NA	rs3733875	0.22	0.22	0.212	0.228634	0.1193	0.5119	0.2147	0.0749	0.2669	0.12	0.51	0.19	0.08	0.1762	0.51	.	.	0.002	B	0.009	B	0.193	N	0.999	P	0.345	N	-3.03	D	-0.976	T	0.000	T	0.052	-1.388	0.024	-1.26	-0.383	-0.301	1.373	-1.388241	NA	0.48	0.114186	0.070359	NA	0.167	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000082107.1;CLNDSDB=.;CLNDSDBID=.	8.9236474
760	18	28898294	28898294	A	G	exonic	DSG1	NA	nonsynonymous SNV	DSG1:NM_001942:exon1:c.A31G:p.M11V	exonic	ENSG00000134760	NA	nonsynonymous SNV	ENSG00000134760:ENST00000257192:exon1:c.A31G:p.M11V	Score=313;Name=lod=25	NA	18q12.1	NA	NA	NA	NA	rs1426310	0.35	0.35	0.346	0.36262	0.4911	0.0694	0.2997	0.4349	0.4796	0.5	0.06	0.35	0.43	0.4344	0.5	0.86	T	0.0	B	0.0	B	0.394	N	0.124	P	-1.39	N	0.59	T	-0.919	T	0.000	T	0.04	-0.231	2.884	4.32	0.446	1.404	6.066	-0.231213	NA	NA	0.487326	0.465502	NA	0.435	NA	8.9205074
760	17	7400815	7400815	T	C	exonic	POLR2A	NA	synonymous SNV	POLR2A:NM_000937:exon6:c.T960C:p.N320N	exonic	ENSG00000181222	NA	synonymous SNV	ENSG00000181222:ENST00000322644:exon6:c.T960C:p.N320N,ENSG00000181222:ENST00000572844:exon6:c.T960C:p.N320N	Score=619;Name=lod=436	NA	17p13.1	NA	Name=c-Fos,Max	Name=22	Score=92;Name=958479_0_+_92	rs2228128	0.16	0.16	0.132	0.117612	0.2664	0.0536	0.1354	0.0598	0.0961	0.27	0.06	0.17	0.08	0.199	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.448452	NA	NA	0.280814	0.089197	NA	0.101	NA	8.9204526
760	1	27709020	27709020	T	C	exonic	CD164L2	NA	nonsynonymous SNV	CD164L2:NM_207397:exon2:c.A226G:p.M76V	exonic	ENSG00000174950	NA	nonsynonymous SNV	ENSG00000174950:ENST00000374025:exon2:c.A226G:p.M76V,ENSG00000174950:ENST00000374027:exon2:c.A226G:p.M76V,ENSG00000174950:ENST00000374030:exon2:c.A226G:p.M76V	Score=313;Name=lod=25	NA	1p36.11	NA	NA	NA	NA	rs2504779	0.28	0.28	0.278	0.336661	0.1362	0.3998	0.0764	0.6082	0.2955	0.13	0.35	0.08	0.59	0.1798	0.59	1	T	0.0	B	0.0	B	0.001	N	1.000	P	-2.075	N	1.31	T	-0.918	T	0.000	T	0.042	-2.099	0.006	3.58	0.524	0.367	6.445	-2.098954	NA	1	0.097442	0.526782	NA	0.261	NA	8.9198914
760	11	1264183	1264183	G	A	exonic	MUC5B	NA	nonsynonymous SNV	MUC5B:NM_002458:exon31:c.G6073A:p.A2025T	exonic	ENSG00000117983	NA	nonsynonymous SNV	ENSG00000117983:ENST00000447027:exon31:c.G6082A:p.A2028T,ENSG00000117983:ENST00000529681:exon31:c.G6073A:p.A2025T	NA	NA	11p15.5	NA	NA	NA	NA	rs34739266	0.07	0.07	0.044	0.0852636	0.1421	0.0208	0.0908	0.0325	0.1605	0.13	0.02	0.09	0.02	0.1225	0.15	0	D	0.0	B	0.0	B	.	.	1.000	N	-1.59	N	2.5	T	-0.933	T	0.000	T	0.043	0.062	4.339	-1.71	-1.757	0.082	6.783	0.062304	NA	NA	0.149762	0.044592	NA	0.029	NA	8.9189714
760	6	80228541	80228541	A	G	exonic	LCA5	NA	nonsynonymous SNV	LCA5:NM_001122769:exon2:c.T71C:p.L24S,LCA5:NM_181714:exon3:c.T71C:p.L24S	exonic	ENSG00000135338	NA	nonsynonymous SNV	ENSG00000135338:ENST00000467898:exon1:c.T71C:p.L24S,ENSG00000135338:ENST00000369846:exon2:c.T71C:p.L24S,ENSG00000135338:ENST00000392959:exon3:c.T71C:p.L24S	Score=349;Name=lod=35	NA	6q14.1	NA	Name=GATA-1	NA	NA	rs2655655	0.89	0.89	0.89	0.890575	0.7893	0.9722	0.8847	0.9478	0.8374	0.79	0.98	0.87	0.95	0.8346	0.98	0.58	T	0.0	B	0.0	B	0.042	N	1.000	P	-1.7	N	1.68	T	-0.942	T	0.005	T	0.063	0.099	4.533	4.41	0.816	2.720	9.370	0.098931	NA	0.22	0.792442	0.923967	NA	0.891	NA	8.9169914
761	1	9017204	9017204	A	G	exonic	CA6	NA	nonsynonymous SNV	CA6:NM_001270501:exon2:c.A88G:p.S30G,CA6:NM_001215:exon3:c.A268G:p.S90G,CA6:NM_001270500:exon3:c.A268G:p.S90G	exonic	ENSG00000131686	NA	nonsynonymous SNV	ENSG00000131686:ENST00000377442:exon2:c.A88G:p.S30G,ENSG00000131686:ENST00000377436:exon3:c.A268G:p.S90G,ENSG00000131686:ENST00000377443:exon3:c.A268G:p.S90G,ENSG00000131686:ENST00000549778:exon3:c.A172G:p.S58G	NA	NA	1p36.23	NA	NA	NA	NA	rs2274333	0.32	0.32	0.29	0.34385	0.2913	0.5575	0.3919	0.1135	0.455	0.29	0.54	0.35	0.1	0.3317	0.54	0.13	T	0.984	D	0.789	P	0.304	N	0.999	P	2.015	M	0.64	T	-1.003	T	0.000	T	0.346	3.924	19.96	-0.413	-0.257	0.016	1.558	3.924134	3.924134	0.3	0.296279	0.159101	NA	0.239	NA	8.9140544
761	11	5411031	5411031	C	T	exonic	OR51M1	NA	nonsynonymous SNV	OR51M1:NM_001004756:exon1:c.C403T:p.L135F	exonic	ENSG00000184698	NA	nonsynonymous SNV	ENSG00000184698:ENST00000328611:exon1:c.C403T:p.L135F	Score=448;Name=lod=88	NA	11p15.4	Score=850;Name=V$FAC1_01	NA	NA	NA	rs1498468	0.69	0.69	0.688	0.698682	0.8231	0.5486	0.7277	0.6815	0.728	0.81	0.54	0.74	0.64	0.7684	0.83	1	T	.	.	.	.	0.064	N	0.000	P	.	.	1.32	T	-0.963	T	0.000	T	0.043	-0.975	0.3	5.05	0.947	4.491	7.469	-0.974717	NA	1	0.828224	0.738234	NA	0.688	NA	8.9136094
761	6	90372574	90372574	A	C	exonic	MDN1	NA	nonsynonymous SNV	MDN1:NM_014611:exon86:c.T14349G:p.D4783E	exonic	ENSG00000112159	NA	nonsynonymous SNV	ENSG00000112159:ENST00000369393:exon86:c.T14349G:p.D4783E,ENSG00000112159:ENST00000428876:exon86:c.T14349G:p.D4783E	NA	NA	6q15	NA	NA	NA	NA	rs36040566	0.08	0.08	0.065	0.0888578	0.1551	0.0476	0.085	0.0053	0.1789	0.14	0.04	0.07	0.01	0.1206	0.14	0.77	T	0.002	B	0.004	B	0.016	N	1.000	P	-0.225	N	3.99	T	-0.943	T	0.001	T	0.069	1.022	9.175	-6.99	-0.797	-2.338	1.043	1.022246	NA	0.6	0.144186	0.028143	NA	0.123	NA	8.9134474
761	11	5475118	5475118	A	G	exonic	OR51I2	NA	nonsynonymous SNV	OR51I2:NM_001004754:exon1:c.A400G:p.T134A	exonic	ENSG00000187918	NA	nonsynonymous SNV	ENSG00000187918:ENST00000341449:exon1:c.A400G:p.T134A	NA	NA	11p15.4	Score=799;Name=V$OCT1_01	NA	NA	NA	rs12577167	0.18	0.18	0.149	0.192692	0.1282	0.3581	0.1628	0.0666	0.2802	0.14	0.33	0.16	0.07	0.1663	0.33	0.12	T	0.002	B	0.002	B	0.002	N	0.016	P	0.915	L	6.67	T	-0.912	T	0.000	T	0.052	1.207	9.901	1.77	0.520	-1.476	2.150	1.20676	NA	0.23	0.126949	0.069741	NA	0.109	NA	8.9118844
761	2	47601106	47601106	T	C	exonic	EPCAM	NA	nonsynonymous SNV	EPCAM:NM_002354:exon3:c.T344C:p.M115T	exonic	ENSG00000119888	NA	nonsynonymous SNV	ENSG00000119888:ENST00000263735:exon3:c.T344C:p.M115T,ENSG00000119888:ENST00000419334:exon3:c.T572C:p.M191T,ENSG00000119888:ENST00000405271:exon4:c.T428C:p.M143T,ENSG00000119888:ENST00000456133:exon4:c.T428C:p.M143T	NA	NA	2p21	Score=960;Name=V$USF_C	Name=SMC3_(ab9263),CTCF_(SC-5916),USF-1,CTCF,CTCF_(C-20),Rad21	Name=21	NA	rs1126497	0.66	0.66	0.666	0.666134	0.4692	0.8323	0.5159	0.8888	0.5031	0.48	0.8	0.5	0.89	0.5198	0.89	1	T	0.0	B	0.0	B	0.060	N	1.000	P	-0.895	N	0.05	T	-0.934	T	0.000	T	0.48	-0.14	3.317	1.71	0.160	0.040	11.894	-0.13965	NA	0.98	0.432791	0.828189	NA	0.58	NA	8.9115424
761	12	132325239	132325239	G	A	exonic	MMP17	NA	nonsynonymous SNV	MMP17:NM_016155:exon4:c.G544A:p.A182T	exonic	ENSG00000198598	NA	nonsynonymous SNV	ENSG00000198598:ENST00000534865:exon1:c.G67A:p.A23T,ENSG00000198598:ENST00000535291:exon3:c.G292A:p.A98T,ENSG00000198598:ENST00000545671:exon3:c.G232A:p.A78T,ENSG00000198598:ENST00000360564:exon4:c.G544A:p.A182T,ENSG00000198598:ENST00000545790:exon4:c.G292A:p.A98T	NA	Name=Migraine	12q24.33	NA	NA	NA	NA	rs6598163	0.46	0.46	0.414	0.453674	0.4583	0.5238	0.4424	0.4516	0.3875	0.47	0.48	0.45	0.43	0.4745	0.49	0.06	T	0.051	B	0.022	B	0.495	N	1.000	P	-0.085	N	2.6	T	-0.904	T	0.000	T	0.188	1.234	10.01	-5.13	-0.983	-0.298	8.995	1.233697	1.233697	0.21	0.490463	0.435542	NA	0.594	NA	8.9100704
761	16	27720201	27720201	C	T	exonic	KIAA0556	NA	nonsynonymous SNV	KIAA0556:NM_015202:exon13:c.C1565T:p.T522M	exonic	ENSG00000047578	NA	nonsynonymous SNV	ENSG00000047578:ENST00000261588:exon13:c.C1565T:p.T522M	NA	NA	16p12.1	NA	NA	NA	NA	rs12930355	0.09	0.09	0.071	0.0682907	0.1551	0.001	0.1715	0.0189	0.0419	0.16	NA	0.15	0.02	0.1191	0.16	0.23	T	0.016	B	0.008	B	0.448	N	1.000	P	0.41	N	2.55	T	-0.947	T	0.000	T	0.084	-0.158	3.23	-4.56	-0.536	-1.350	4.977	-0.157586	NA	0.16	0.149302	0.050523	ID=COSM50424;OCCURENCE=1(large_intestine)	0.036	NA	8.9098314
761	11	5411395	5411395	C	A	exonic	OR51M1	NA	nonsynonymous SNV	OR51M1:NM_001004756:exon1:c.C767A:p.P256H	exonic	ENSG00000184698	NA	nonsynonymous SNV	ENSG00000184698:ENST00000328611:exon1:c.C767A:p.P256H	Score=369;Name=lod=42	NA	11p15.4	NA	NA	NA	NA	rs9783355	0.7	0.7	0.707	0.71226	0.8231	0.5387	0.7349	0.7368	0.728	0.81	0.52	0.75	0.7	0.7724	0.83	1	T	.	.	.	.	0.003	N	0.000	P	.	.	9.37	T	-1.077	T	0.000	T	0.058	-0.41	2.083	5.24	1.021	6.718	11.525	-0.410268	NA	1	0.828296	0.780659	NA	0.71	NA	8.9095374
761	19	8121369	8121369	C	T	exonic	CCL25	NA	nonsynonymous SNV	CCL25:NM_001201359:exon4:c.C311T:p.T104M,CCL25:NM_005624:exon4:c.C311T:p.T104M	exonic	ENSG00000131142	NA	nonsynonymous SNV	ENSG00000131142:ENST00000390669:exon3:c.C311T:p.T104M,ENSG00000131142:ENST00000253451:exon4:c.C311T:p.T104M	NA	NA	19p13.2	NA	NA	NA	NA	rs1129763	0.11	0.11	0.09	0.095647	0.1491	0.1032	0.098	0.0098	0.1472	0.16	0.12	0.12	0.01	0.1347	0.16	0.17	T	0.013	B	0.002	B	0.000	N	1.000	P	0	N	3.81	T	-0.954	T	0.000	T	0.02	-0.269	2.71	-5.63	-2.300	-0.496	0.376	-0.269094	NA	0.13	0.140224	0.029112	NA	0.138	NA	8.9093094
761	17	66364804	66364804	T	C	exonic	ARSG	NA	nonsynonymous SNV	ARSG:NM_001267727:exon7:c.T820C:p.W274R,ARSG:NM_014960:exon7:c.T820C:p.W274R	exonic	ENSG00000141337	NA	nonsynonymous SNV	ENSG00000141337:ENST00000452479:exon6:c.T328C:p.W110R,ENSG00000141337:ENST00000448504:exon7:c.T820C:p.W274R	NA	NA	17q24.2	NA	Name=AP-2alpha,AP-2gamma	NA	NA	rs1558878	0.37	0.37	0.327	0.359425	0.4831	0.2351	0.4424	0.3185	0.3569	0.48	0.25	0.42	0.3	0.4439	0.5	0.54	T	0.0	B	0.0	B	0.489	N	1.000	P	-1.645	N	.	.	-0.914	T	0.000	T	0.045	-1.427	0.021	4.28	1.467	0.486	5.011	-1.427426	NA	0.8	0.497209	0.345892	NA	0.406	NA	8.9091244
761	14	94933695	94933695	G	A	exonic	SERPINA9	NA	nonsynonymous SNV	SERPINA9:NM_175739:exon3:c.C707T:p.P236L,SERPINA9:NM_001042518:exon4:c.C407T:p.P136L	exonic	ENSG00000170054	NA	nonsynonymous SNV	ENSG00000170054:ENST00000337425:exon3:c.C707T:p.P236L,ENSG00000170054:ENST00000380365:exon3:c.C653T:p.P218L,ENSG00000170054:ENST00000448305:exon3:c.C413T:p.P138L,ENSG00000170054:ENST00000546329:exon3:c.C599T:p.P200L,ENSG00000170054:ENST00000298845:exon4:c.C407T:p.P136L,ENSG00000170054:ENST00000424550:exon4:c.C260T:p.P87L	NA	NA	14q32.13	NA	NA	NA	NA	rs17090921	0.33	0.33	0.299	0.322484	0.3101	0.4643	0.3847	0.146	0.3834	0.32	0.48	0.35	0.16	0.3146	0.48	0.1	T	0.773	P	0.289	B	0.000	N	1.000	P	2.055	M	-2.01	D	-1.056	T	0.000	T	0.125	1.435	10.74	1.87	0.390	0.933	5.002	1.435279	1.435279	0.05	0.30075	0.161895	NA	0.268	NA	8.9078834
761	7	151680175	151680175	C	T	exonic	GALNTL5	NA	nonsynonymous SNV	GALNTL5:NM_145292:exon4:c.C473T:p.T158M	exonic	ENSG00000106648	NA	nonsynonymous SNV	ENSG00000106648:ENST00000392800:exon4:c.C473T:p.T158M,ENSG00000106648:ENST00000431418:exon5:c.C473T:p.T158M	NA	NA	7q36.1	NA	NA	NA	NA	rs35682935	0.12	0.12	0.116	0.129992	0.1511	0.1597	0.1239	0.0113	0.2423	0.13	0.2	0.13	0.01	0.1358	0.2	0.22	T	0.0	B	0.0	B	0.371	N	1.000	P	-1.235	N	0.13	T	-1.086	T	0.000	T	0.045	0.342	5.856	2.2	0.038	1.946	6.423	0.342146	NA	0.3	0.14	0.028597	NA	0.123	NA	8.9064334
761	5	54459961	54459961	A	G	exonic	GPX8	NA	nonsynonymous SNV	GPX8:NM_001008397:exon3:c.A545G:p.K182R	exonic	ENSG00000164294	NA	nonsynonymous SNV	ENSG00000164294:ENST00000503787:exon3:c.A545G:p.K182R,ENSG00000164294:ENST00000515370:exon3:c.A392G:p.K131R	Score=638;Name=lod=521	NA	5q11.2	NA	NA	NA	NA	rs381852	0.84	0.84	0.857	0.833067	0.7903	0.8274	0.8646	0.9145	0.7505	0.78	0.85	0.85	0.91	0.8095	0.91	0.43	T	0.0	B	0.0	B	0.000	N	0.000	P	-0.695	N	3.87	T	-1.032	T	0.000	T	0.084	2.632	14.76	5.92	1.515	1.946	15.410	2.632157	2.632157	0.75	0.827442	0.882206	NA	0.891	NA	8.9060914
762	11	5411580	5411580	T	C	exonic	OR51M1	NA	nonsynonymous SNV	OR51M1:NM_001004756:exon1:c.T952C:p.F318L	exonic	ENSG00000184698	NA	nonsynonymous SNV	ENSG00000184698:ENST00000328611:exon1:c.T952C:p.F318L	NA	NA	11p15.4	NA	Name=CTCF	NA	NA	rs10768907	0.67	0.67	0.702	0.714457	0.8231	0.5476	0.7349	0.7383	0.728	0.78	0.5	0.72	0.66	0.7789	0.83	1	T	.	.	.	.	0.537	N	1.000	P	.	.	1.54	T	-0.978	T	0.000	T	0.022	-1.911	0.008	-7.92	-1.475	-1.075	6.02	-1.910607	NA	1	0.826471	0.776906	NA	NA	NA	8.9048624
762	19	44302624	44302624	T	C	exonic	LYPD5	NA	nonsynonymous SNV	LYPD5:NM_001031749:exon4:c.A500G:p.N167S,LYPD5:NM_182573:exon4:c.A371G:p.N124S	exonic	ENSG00000159871	NA	nonsynonymous SNV	ENSG00000159871:ENST00000594013:exon3:c.A371G:p.N124S,ENSG00000159871:ENST00000377950:exon4:c.A500G:p.N167S,ENSG00000159871:ENST00000414615:exon4:c.A371G:p.N124S,ENSG00000159871:ENST00000594049:exon4:c.A371G:p.N124S	Score=415;Name=lod=65	NA	19q13.31	Score=770;Name=V$MIF1_01	NA	NA	NA	rs349053	0.38	0.38	0.387	0.445288	0.4791	0.1498	0.3199	0.5469	0.6667	0.47	0.13	0.4	0.52	0.4613	0.55	0.07	T	0.271	B	0.066	B	0.339	N	0.987	P	0.895	L	-0.38	T	-0.928	T	0.000	T	0.013	2.384	13.93	2.15	0.212	0.898	5.960	2.383557	2.383557	0.09	0.488488	0.554925	ID=COSM1394320,COSM1394321;OCCURENCE=1(large_intestine)	0.5	NA	8.9044454
762	19	42190859	42190859	A	T	exonic	CEACAM7	NA	nonsynonymous SNV	CEACAM7:NM_006890:exon2:c.T358A:p.F120I	exonic	ENSG00000007306	NA	nonsynonymous SNV	ENSG00000007306:ENST00000006724:exon2:c.T358A:p.F120I,ENSG00000007306:ENST00000338196:exon2:c.T358A:p.F120I,ENSG00000007306:ENST00000401731:exon2:c.T358A:p.F120I,ENSG00000007306:ENST00000602225:exon2:c.T358A:p.F120I	NA	NA	19q13.2	NA	NA	NA	NA	rs8102488	0.57	0.57	0.603	0.593251	0.4543	0.5109	0.513	0.8389	0.546	0.46	0.53	0.53	0.82	0.5122	0.82	0.42	T	0.001	B	0.004	B	.	.	1.000	P	1.7	L	0.04	T	-0.961	T	0.000	T	0.054	-0.663	1.095	-3.36	-3.597	-3.387	3.971	-0.662917	NA	0.14	0.462907	0.781888	NA	0.601	NA	8.9039264
762	11	1269215	1269215	C	T	exonic	MUC5B	NA	nonsynonymous SNV	MUC5B:NM_002458:exon31:c.C11105T:p.T3702M	exonic	ENSG00000117983	NA	nonsynonymous SNV	ENSG00000117983:ENST00000447027:exon31:c.C11114T:p.T3705M,ENSG00000117983:ENST00000529681:exon31:c.C11105T:p.T3702M	NA	NA	11p15.5	NA	NA	NA	NA	rs34528873	NA	NA	0.038	0.0840655	0.1471	0.0208	0.0821	0.028	0.1616	NA	NA	NA	NA	0.1253	0.16	0	D	0.974	D	0.32	B	.	.	1.000	N	1.24	L	2.29	T	-1.025	T	0.000	T	0.053	0.002	4.022	-0.734	-0.112	-0.099	3.908	0.001605	NA	NA	0.157572	0.042564	NA	0.029	NA	8.9033614
762	3	9876919	9876919	G	A	exonic	TTLL3	NA	nonsynonymous SNV	TTLL3:NM_001025930:exon13:c.G2494A:p.A832T	exonic	ENSG00000214021	NA	nonsynonymous SNV	ENSG00000214021:ENST00000426895:exon13:c.G2494A:p.A832T,ENSG00000214021:ENST00000547186:exon13:c.G2065A:p.A689T	NA	NA	3p25.3	Score=875;Name=V$AP1_01	Name=TCF4	NA	NA	rs1057278	0.15	0.15	0.141	0.134784	0.1243	0.0565	0.1081	0.2572	0.0798	0.13	0.06	0.12	0.29	0.1475	0.29	0.13	T	0.009	B	0.004	B	0.009	N	0.000	P	0	N	3.51	T	-0.922	T	0.000	T	0.115	2.159	13.18	0.904	0.184	0.599	6.033	2.159321	2.159321	0.03	0.160005	0.230496	NA	0.13	NA	8.9015284
762	4	2195024	2195024	T	G	exonic	POLN	NA	nonsynonymous SNV	POLN:NM_181808:exon5:c.A928C:p.M310L	exonic	ENSG00000130997	NA	nonsynonymous SNV	ENSG00000130997:ENST00000382865:exon5:c.A928C:p.M310L,ENSG00000130997:ENST00000511885:exon7:c.A928C:p.M310L	NA	NA	4p16.3	NA	NA	NA	NA	rs10018786	0.32	0.32	0.325	0.330671	0.1243	0.372	0.2464	0.6029	0.1922	0.13	0.37	0.25	0.61	0.194	0.61	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-1.78	N	2.61	T	-0.944	T	0.000	T	0.197	-2.116	0.006	4.64	0.701	2.467	7.320	-2.116122	NA	1	0.115233	0.534952	NA	0.384	NA	8.8998004
762	14	20296010	20296010	G	C	exonic	OR4N2	NA	nonsynonymous SNV	OR4N2:NM_001004723:exon1:c.G403C:p.V135L	exonic	ENSG00000176294	NA	nonsynonymous SNV	ENSG00000176294:ENST00000315947:exon1:c.G403C:p.V135L,ENSG00000176294:ENST00000568211:exon1:c.G403C:p.V135L,ENSG00000176294:ENST00000557677:exon2:c.G403C:p.V135L	NA	NA	14q11.2	NA	Name=CTCF	NA	NA	rs17114261	0.19	0.19	0.179	NA	NA	NA	NA	NA	NA	0.2	0.12	0.17	0.28	0.2206	0.28	0.02	D	0.001	B	0.007	B	0.009	N	1.000	P	-0.485	N	5.35	T	-0.903	T	0.000	T	0.242	0.89	8.615	-0.609	-0.010	-0.609	4.475	0.889998	NA	0.05	0.215349	0.254426	NA	0.232	NA	8.8973844
762	5	70806457	70806457	G	A	exonic	BDP1	NA	nonsynonymous SNV	BDP1:NM_018429:exon17:c.G3538A:p.G1180S	exonic	ENSG00000145734	NA	nonsynonymous SNV	ENSG00000145734:ENST00000358731:exon17:c.G3538A:p.G1180S	NA	NA	5q13.2	NA	NA	NA	NA	rs715748	0.42	0.42	0.414	0.439696	0.492	0.379	0.3444	0.4107	0.5552	0.5	0.39	0.35	0.4	0.4631	0.5	0.16	T	0.0	B	0.0	B	0.349	N	1.000	P	0.69	N	3.43	T	-0.930	T	0.000	T	0.035	0.986	9.024	-4.52	-1.480	-2.097	6.220	0.985723	NA	0.06	0.481432	0.381794	NA	0.406	NA	8.8968014
762	12	97136218	97136218	T	C	intergenic	CDK17,NEDD1	dist=341852;dist=164783	NA	NA	exonic	ENSG00000270032	NA	nonsynonymous SNV	ENSG00000270032:ENST00000524981:exon19:c.T2426C:p.V809A	NA	NA	12q23.1	Score=831;Name=V$FREAC3_01	NA	NA	NA	rs7978894	0.44	0.44	0.438	0.429113	0.2992	0.5625	0.3429	0.5287	0.3517	0.31	0.59	0.35	0.54	0.353	0.59	0.6	T	0.0	B	0.0	B	0.004	N	1.000	P	-1.59	N	.	.	-0.945	T	0.000	T	0.015	-0.556	1.487	-7.86	-1.575	-1.518	1.238	-0.555673	NA	0.97	0.285714	0.510445	NA	0.29	NA	8.8954194
763	11	61672265	61672265	T	C	exonic	RAB3IL1	NA	synonymous SNV	RAB3IL1:NM_001271686:exon5:c.A669G:p.R223R,RAB3IL1:NM_013401:exon6:c.A747G:p.R249R	exonic	ENSG00000167994	NA	synonymous SNV	ENSG00000167994:ENST00000301773:exon5:c.A669G:p.R223R,ENSG00000167994:ENST00000394836:exon6:c.A747G:p.R249R	Score=539;Name=lod=206	NA	11q12.2	Score=924;Name=V$STAT5A_02	Name=TAF1,HEY1	Name=16	NA	rs174474	0.27	0.27	0.238	0.313698	0.2336	0.3353	0.2003	0.27	0.5133	0.24	0.32	0.25	0.26	0.3135	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.630282	1.630282	NA	0.225634	0.278383	NA	0.246	NA	8.8939326
763	5	1240757	1240757	C	G	exonic	SLC6A18	NA	stopgain	SLC6A18:NM_182632:exon7:c.C957G:p.Y319X	exonic	ENSG00000164363	NA	stopgain	ENSG00000164363:ENST00000324642:exon7:c.C957G:p.Y319X	NA	NA	5p15.33	NA	NA	NA	NA	rs7447815	0.34	0.34	0.329	0.348642	0.3688	0.2351	0.3775	0.3638	0.4039	0.37	0.24	0.37	0.38	0.3645	0.38	1	T	.	.	.	.	0.280	N	0.000	P	.	.	.	.	.	.	.	.	.	2.387	13.94	-3.14	-0.907	-3.005	13.214	2.386926	2.386926	0.12	0.372791	0.348162	NA	0.333	NA	8.893909
763	22	29957570	29957570	G	A	exonic	NIPSNAP1	NA	synonymous SNV	NIPSNAP1:NM_001202502:exon6:c.C444T:p.L148L,NIPSNAP1:NM_003634:exon6:c.C504T:p.L168L	exonic	ENSG00000184117	NA	synonymous SNV	ENSG00000184117:ENST00000216121:exon6:c.C504T:p.L168L,ENSG00000184117:ENST00000437094:exon6:c.C99T:p.L33L	Score=533;Name=lod=195	NA	22q12.2	NA	NA	NA	NA	rs1058642	0.22	0.22	0.23	0.181909	0.2744	0.1468	0.1571	0.2133	0.0982	0.27	0.16	0.2	0.24	0.2252	0.27	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	0.677	7.62	-9.67	-2.274	-0.643	9.016	0.676691	NA	NA	0.273372	0.21675	NA	0.254	NA	8.8936946
763	1	241929542	241929542	G	A	exonic	WDR64	NA	nonsynonymous SNV	WDR64:NM_144625:exon15:c.G1940A:p.R647Q	exonic	ENSG00000162843	NA	nonsynonymous SNV	ENSG00000162843:ENST00000472717:exon5:c.G617A:p.R206Q,ENSG00000162843:ENST00000414635:exon10:c.G1253A:p.R418Q,ENSG00000162843:ENST00000366552:exon15:c.G1940A:p.R647Q,ENSG00000162843:ENST00000437684:exon15:c.G1940A:p.R647Q	Score=444;Name=lod=85	NA	1q43	NA	NA	NA	NA	rs12095445	0.12	0.12	0.113	0.110024	0.1541	0.003	0.1225	0.2194	0.0184	0.14	0.0035	0.14	0.21	0.1235	0.22	0.4	T	0.088	B	0.023	B	0.897	N	1.000	P	0.345	N	1.06	T	-0.993	T	0.000	T	0.161	0.616	7.315	0.735	-0.072	2.437	3.756	0.615699	NA	0.18	0.163721	0.216069	NA	0.217	NA	8.8920124
763	19	872089	872089	A	G	exonic	MED16	NA	synonymous SNV	MED16:NM_005481:exon12:c.T1935C:p.F645F	exonic	ENSG00000175221	NA	synonymous SNV	ENSG00000175221:ENST00000589119:exon11:c.T1935C:p.F645F,ENSG00000175221:ENST00000312090:exon12:c.T1935C:p.F645F,ENSG00000175221:ENST00000325464:exon12:c.T1935C:p.F645F,ENSG00000175221:ENST00000395808:exon12:c.T1935C:p.F645F	Score=478;Name=lod=117	NA	19p13.3	Score=826;Name=V$AP4_01	Name=GR	Name=20	NA	rs72984031	0.17	0.17	0.182	0.176717	0.2793	0.0089	0.1412	0.2133	0.2198	0.27	0.01	0.18	0.2	0.2225	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.17589	NA	NA	0.273142	0.237206	NA	0.145	NA	8.8917246
763	4	178262784	178262784	A	G	exonic	NEIL3	NA	nonsynonymous SNV	NEIL3:NM_018248:exon6:c.A857G:p.H286R	exonic	ENSG00000109674	NA	nonsynonymous SNV	ENSG00000109674:ENST00000264596:exon6:c.A857G:p.H286R	NA	NA	4q34.3	Score=751;Name=V$SRF_01	NA	NA	NA	rs34193982	0.1	0.1	0.099	0.091254	0.161	0.1012	0.0533	0.0053	0.1524	0.16	0.11	0.09	0.01	0.1284	0.16	0.58	T	0.0	B	0.001	B	0.634	N	1.000	P	1.7	L	3.83	T	-0.900	T	0.000	T	0.033	0.458	6.487	-4.55	-0.480	0.245	0.015	0.458106	NA	0.38	0.153953	0.026782	NA	0.116	NA	8.8899804
763	3	109052732	109052732	T	C	exonic	DPPA4	NA	nonsynonymous SNV	DPPA4:NM_018189:exon2:c.A163G:p.I55V	exonic	ENSG00000121570	NA	nonsynonymous SNV	ENSG00000121570:ENST00000335658:exon2:c.A163G:p.I55V,ENSG00000121570:ENST00000477303:exon2:c.A7G:p.I3V	NA	NA	3q13.13	NA	NA	NA	NA	rs3762648	0.49	0.49	0.474	0.484026	0.4831	0.751	0.4697	0.2231	0.5726	0.47	0.73	0.46	0.27	0.4934	0.73	.	.	0.0	B	0.001	B	0.001	N	1.000	P	-0.895	N	2.01	T	-1.015	T	0.000	T	0.065	-1.754	0.01	-6.02	-1.950	-1.085	6.703	-1.753635	NA	0.56	0.467791	0.250567	NA	0.297	NA	8.8890424
763	7	64389089	64389089	A	C	exonic	ZNF273	NA	nonsynonymous SNV	ZNF273:NM_021148:exon4:c.A1383C:p.E461D	exonic	ENSG00000198039	NA	nonsynonymous SNV	ENSG00000198039:ENST00000476120:exon4:c.A1383C:p.E461D,ENSG00000198039:ENST00000319636:exon5:c.A1188C:p.E396D	NA	NA	7q11.21	NA	Name=KAP1,SETDB1	NA	NA	rs2017252	0.46	0.46	0.433	0.455871	0.4722	0.4911	0.5101	0.3502	0.5072	0.46	0.51	0.5	0.36	0.4858	0.51	0.14	T	0.19	B	0.327	B	.	.	1.000	P	0.38	N	2.31	T	-0.907	T	0.000	T	0.039	1.965	12.53	-2.32	0.175	-5.647	1.937	1.964849	1.964849	0.1	0.486508	0.385052	NA	0.478	NA	8.8888254
763	17	72927123	72927123	G	T	exonic	OTOP2	NA	nonsynonymous SNV	OTOP2:NM_178160:exon6:c.G1393T:p.G465W	exonic	ENSG00000183034	NA	nonsynonymous SNV	ENSG00000183034:ENST00000580223:exon5:c.G1393T:p.G465W,ENSG00000183034:ENST00000331427:exon6:c.G1393T:p.G465W	NA	NA	17q25.1	NA	NA	NA	NA	rs6501741	0.54	0.54	0.531	0.544728	0.663	0.5645	0.6571	0.2489	0.7229	0.69	0.57	0.61	0.22	0.639	0.69	0.03	D	0.993	D	0.663	P	0.661	N	1.000	P	0.55	N	2.79	T	-0.966	T	0.000	T	0.167	0.369	6.004	-2.23	-0.515	-0.038	7.211	0.369093	NA	0	0.643605	0.322742	NA	0.442	NA	8.8877284
763	16	1250389	1250389	A	G	exonic	CACNA1H	NA	nonsynonymous SNV	CACNA1H:NM_001005407:exon7:c.A937G:p.M313V,CACNA1H:NM_021098:exon7:c.A937G:p.M313V	exonic	ENSG00000196557	NA	nonsynonymous SNV	ENSG00000196557:ENST00000565831:exon6:c.A937G:p.M313V,ENSG00000196557:ENST00000348261:exon7:c.A937G:p.M313V,ENSG00000196557:ENST00000358590:exon7:c.A937G:p.M313V	Score=441;Name=lod=83	NA	16p13.3	NA	NA	NA	NA	rs36117280	0.1	0.1	0.062	0.102636	0.1392	0.0625	0.0965	0.0651	0.1616	0.15	0.05	0.1	0.07	0.1632	0.15	0.54	T	0.0	B	0.0	B	0.001	N	1.000	P	-1.23	N	-3.76	D	-0.621	T	0.006	T	0.128	-0.862	0.522	1.31	-0.083	0.078	5.210	-0.861845	NA	0.57	0.144316	0.070513	NA	0.159	NA	8.8866174
763	17	39305956	39305956	G	A	exonic	KRTAP4-5	NA	nonsynonymous SNV	KRTAP4-5:NM_033188:exon1:c.C64T:p.R22C	exonic	ENSG00000198271	NA	nonsynonymous SNV	ENSG00000198271:ENST00000343246:exon1:c.C64T:p.R22C	NA	NA	17q21.2	Score=884;Name=V$E47_01	Name=NRSF	NA	NA	rs1497383	0.44	0.44	0.38	0.441094	0.4861	0.3532	0.5144	0.3699	0.5297	0.48	0.38	0.52	0.38	0.4788	0.52	0.09	T	0.06	B	0.013	B	0.885	U	0.988	P	2.205	M	4.88	T	-0.978	T	0.000	T	0.117	0.059	4.323	1.46	0.421	-0.126	2.132	0.059209	NA	NA	0.481831	0.376476	NA	0.225	NA	8.8866024
764	1	12921333	12921333	G	A	exonic	PRAMEF2	NA	nonsynonymous SNV	PRAMEF2:NM_023014:exon4:c.G1124A:p.C375Y	exonic	ENSG00000120952	NA	nonsynonymous SNV	ENSG00000120952:ENST00000240189:exon4:c.G1124A:p.C375Y	NA	NA	1p36.21	NA	NA	NA	NA	rs56145411	0.16	0.16	0.122	0.271366	0.2157	0.2857	0.1844	0.3858	0.2209	0.13	0.14	0.17	0.23	0.2328	0.23	0.01	D	0.002	B	0.102	B	0.433	N	1.000	P	1.04	L	3.01	T	-0.914	T	0.000	T	0.189	-0.176	3.142	-0.682	-2.179	-0.801	5.122	-0.176022	NA	0.01	NA	NA	NA	NA	NA	8.8848334
764	14	77843814	77843814	T	C	exonic	SAMD15	NA	nonsynonymous SNV	SAMD15:NM_001010860:exon1:c.T53C:p.L18P	exonic	ENSG00000100583	NA	nonsynonymous SNV	ENSG00000100583:ENST00000216471:exon1:c.T53C:p.L18P	NA	NA	14q24.3	NA	Name=YY1,RFX5_(N-494),ERalpha_a,Sin3Ak-20,GATA-1,GABP,Mxi1_(bHLH),YY1_(C-20),Max,EBF1_(C-8)	Name=136	NA	rs11844594	0.48	0.48	0.491	0.513179	0.497	0.0893	0.4841	0.888	0.4806	0.49	0.08	0.54	0.89	0.4829	0.89	0.33	T	0.0	B	0.0	B	0.959	N	1.000	P	0.6	N	1.21	T	-1.024	T	0.000	T	0.071	1.135	9.626	-1.74	-1.173	-0.605	5.426	1.135248	NA	0.08	0.468605	0.822742	ID=COSM147819;OCCURENCE=1(stomach)	0.609	NA	8.8848284
764	8	17927327	17927327	T	C	exonic	ASAH1	NA	nonsynonymous SNV	ASAH1:NM_004315:exon4:c.A325G:p.I109V,ASAH1:NM_177924:exon4:c.A277G:p.I93V	exonic	ENSG00000104763	NA	nonsynonymous SNV	ENSG00000104763:ENST00000262097:exon4:c.A277G:p.I93V,ENSG00000104763:ENST00000381733:exon4:c.A325G:p.I109V,ENSG00000104763:ENST00000417108:exon4:c.A82G:p.I28V,ENSG00000104763:ENST00000520781:exon4:c.A277G:p.I93V	NA	NA	8p22	Score=959;Name=V$NFAT_Q6	NA	NA	NA	rs1049874	0.42	0.42	0.379	0.420527	0.4771	0.372	0.5735	0.2496	0.5348	0.47	0.36	0.6	0.3	0.4796	0.6	0.61	T	0.0	B	0.001	B	0.566	N	0.064	P	0.4	N	0.96	T	-1.011	T	0.000	T	0.006	-1.179	0.084	-10.5	-3.229	-1.936	4.180	-1.179147	NA	0.88	0.491859	0.284514	NA	0.326	NA	8.8847744
764	12	55725690	55725690	C	T	exonic	OR6C3	NA	nonsynonymous SNV	OR6C3:NM_054104:exon1:c.C206T:p.S69L	exonic	ENSG00000205329	NA	nonsynonymous SNV	ENSG00000205329:ENST00000379667:exon1:c.C206T:p.S69L	NA	NA	12q13.2	NA	NA	NA	NA	rs4318060	0.12	0.12	0.127	0.107827	0.1571	NA	0.0951	0.1997	0.0532	0.16	NA	0.1	0.2	0.1298	0.2	0.15	T	0.0	B	0.004	B	0.112	N	1.000	P	1.14	L	2.16	T	-1.055	T	0.000	T	0.41	1.69	11.61	4.82	2.665	0.936	14.117	1.690093	1.690093	0.2	0.164419	0.200182	NA	0.159	NA	8.8820144
764	7	141537735	141537735	T	G	exonic	PRSS37	NA	nonsynonymous SNV	PRSS37:NM_001008270:exon3:c.A355C:p.T119P,PRSS37:NM_001171951:exon3:c.A355C:p.T119P	exonic	ENSG00000165076	NA	nonsynonymous SNV	ENSG00000165076:ENST00000350549:exon3:c.A355C:p.T119P,ENSG00000165076:ENST00000438520:exon4:c.A355C:p.T119P	NA	NA	7q34	NA	NA	NA	NA	rs12669721	0.54	0.54	0.534	0.529353	0.4642	0.755	0.5764	0.3464	0.5777	0.46	0.76	0.56	0.4	0.5083	0.76	0.7	T	0.0	B	0.0	B	0.828	N	1.000	P	-1.38	N	1.01	T	-0.982	T	0.000	T	0.11	-0.893	0.453	-6.72	-1.543	-1.125	4.183	-0.892662	NA	0.73	0.481279	0.375624	ID=COSM1179611;OCCURENCE=1(prostate)	0.486	NA	8.8795544
764	6	90402482	90402482	G	A	exonic	MDN1	NA	nonsynonymous SNV	MDN1:NM_014611:exon63:c.C10267T:p.H3423Y	exonic	ENSG00000112159	NA	nonsynonymous SNV	ENSG00000112159:ENST00000369393:exon63:c.C10267T:p.H3423Y,ENSG00000112159:ENST00000428876:exon63:c.C10267T:p.H3423Y	NA	NA	6q15	NA	NA	NA	NA	rs9294445	0.66	0.66	0.652	0.604433	0.4602	0.9077	0.6988	0.5998	0.3793	0.48	0.92	0.67	0.62	0.5272	0.92	0.39	T	0.001	B	0.001	B	0.005	N	1.000	P	1.935	M	4.09	T	-0.917	T	0.004	T	0.035	-1.244	0.053	3.31	0.280	1.635	7.674	-1.24355	NA	0.13	0.466977	0.60236	NA	0.5	NA	8.8789564
764	5	145442133	145442133	G	A	exonic	SH3RF2	NA	nonsynonymous SNV	SH3RF2:NM_152550:exon10:c.G2059A:p.V687I	exonic	ENSG00000156463	NA	nonsynonymous SNV	ENSG00000156463:ENST00000511217:exon9:c.G2059A:p.V687I,ENSG00000156463:ENST00000359120:exon10:c.G2059A:p.V687I	NA	NA	5q32	NA	NA	NA	NA	rs11435	0.16	0.16	0.115	0.173922	0.1342	0.3036	0.2233	0.0106	0.2669	0.14	0.28	0.19	0.02	0.1746	0.28	0.69	T	0.001	B	0.001	B	0.819	N	1.000	P	0.345	N	2.31	T	-0.943	T	0.000	T	0.034	-0.472	1.821	-11.0	-1.851	-1.931	9.677	-0.472314	NA	0.97	0.146395	0.02837	NA	0.087	NA	8.8781384
764	18	43319519	43319519	G	A	exonic	SLC14A1	NA	nonsynonymous SNV	SLC14A1:NM_001146037:exon7:c.G1006A:p.D336N,SLC14A1:NM_015865:exon8:c.G838A:p.D280N,SLC14A1:NM_001128588:exon9:c.G1006A:p.D336N,SLC14A1:NM_001146036:exon9:c.G838A:p.D280N	exonic	ENSG00000141469	NA	nonsynonymous SNV	ENSG00000141469:ENST00000589322:exon5:c.G442A:p.D148N,ENSG00000141469:ENST00000535474:exon6:c.G442A:p.D148N,ENSG00000141469:ENST00000586142:exon6:c.G838A:p.D280N,ENSG00000141469:ENST00000402943:exon7:c.G523A:p.D175N,ENSG00000141469:ENST00000436407:exon7:c.G1006A:p.D336N,ENSG00000141469:ENST00000502059:exon7:c.G514A:p.D172N,ENSG00000141469:ENST00000321925:exon8:c.G838A:p.D280N,ENSG00000141469:ENST00000415427:exon9:c.G1006A:p.D336N	NA	NA	18q12.3	NA	NA	NA	NA	rs1058396	0.45	0.45	0.421	0.410942	0.501	0.5258	0.5187	0.2277	0.3712	0.5	0.52	0.51	0.25	0.4695	0.52	0.5	T	0.002	B	0.008	B	0.026	N	0.010	P	0.385	N	0.74	T	-0.951	T	0.000	T	0.106	0.972	8.967	-7.56	-1.283	0.700	13.088	0.971992	NA	0.52	0.485698	0.26532	NA	0.428	CLINSIG=non-pathogenic;CLNDBN=KIDD_BLOOD_POLYMORPHISM_Jk(a)/Jk(b);CLNREVSTAT=single;CLNACC=RCV000019290.1;CLNDSDB=.;CLNDSDBID=.	8.8771354
765	17	80059690	80059690	G	A	exonic	CCDC57	NA	synonymous SNV	CCDC57:NM_198082:exon17:c.C2616T:p.G872G	exonic	ENSG00000176155	NA	nonsynonymous SNV	ENSG00000176155:ENST00000583053:exon1:c.C37T:p.H13Y	NA	NA	17q25.3	NA	Name=Ini1	Name=8	NA	rs61735692	0.02	0.02	0.011	0.013778	0.0398	NA	0.0288	0.0038	0.0041	0.04	NA	0.02	0.01	0.0376	0.05	.	.	.	.	.	.	.	.	1.000	N	.	.	.	.	-1.042	T	0.011	T	.	-0.154	3.247	0.444	0.392	0.849	4.251	-0.154002	NA	NA	0.050024	0.011214	NA	0.014	NA	8.872576
765	19	4294807	4294807	G	A	exonic	TMIGD2	NA	nonsynonymous SNV	TMIGD2:NM_001169126:exon3:c.C413T:p.P138L,TMIGD2:NM_144615:exon3:c.C413T:p.P138L	exonic	ENSG00000167664	NA	nonsynonymous SNV	ENSG00000167664:ENST00000600114:exon2:c.C53T:p.P18L,ENSG00000167664:ENST00000301272:exon3:c.C413T:p.P138L,ENSG00000167664:ENST00000595645:exon3:c.C413T:p.P138L	NA	NA	19p13.3	NA	NA	NA	NA	rs78320454	0.1	0.1	0.091	0.110823	0.1561	0.0754	0.1513	0.0068	0.2127	0.14	0.1	0.16	0.01	0.1479	0.16	0.24	T	0.032	B	0.015	B	.	.	1.000	P	0.55	N	1.62	T	-0.996	T	0.000	T	0.021	0.332	5.801	-4.98	-1.024	-0.461	0.988	0.332096	NA	0.34	0.156977	0.033818	NA	0.051	NA	8.8723564
765	14	20215989	20215989	A	G	exonic	OR4Q3	NA	nonsynonymous SNV	OR4Q3:NM_172194:exon1:c.A403G:p.T135A	exonic	ENSG00000182652	NA	nonsynonymous SNV	ENSG00000182652:ENST00000331723:exon1:c.A403G:p.T135A	NA	NA	14q11.2	NA	NA	NA	NA	rs17210864	0.09	0.09	0.065	0.109625	0.1481	0.0079	0.0764	0.0885	0.227	0.16	0.01	0.09	0.06	0.1463	0.17	0.04	D	0.003	B	0.005	B	0.105	U	0.999	N	0.735	N	7.59	T	-0.871	T	0.000	T	0.124	0.064	4.346	3.2	0.707	-0.357	4.536	0.063601	NA	0.08	0.167093	0.107808	NA	0.08	NA	8.8718404
765	2	110373197	110373197	G	A	exonic	SOWAHC	NA	synonymous SNV	SOWAHC:NM_023016:exon1:c.G1131A:p.K377K	exonic	ENSG00000198142	NA	synonymous SNV	ENSG00000198142:ENST00000356454:exon1:c.G1131A:p.K377K	Score=278;Name=lod=18	NA	2q13	Score=798;Name=V$E2F_01	Name=USF-1,Max,Pol2	Name=43	NA	rs1560884	0.33	0.33	0.273	0.324081	0.2575	0.3929	0.4697	0.2526	0.3149	0.26	0.4	0.44	0.27	0.2913	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.785064	NA	NA	0.246628	0.273718	NA	0.232	NA	8.8712386
765	6	32362741	32362741	C	T	exonic	BTNL2	NA	nonsynonymous SNV	BTNL2:NM_019602:exon6:c.G1140A:p.M380I	exonic	ENSG00000204290	NA	nonsynonymous SNV	ENSG00000204290:ENST00000414363:exon4:c.G510A:p.M170I,ENSG00000204290:ENST00000540315:exon4:c.G510A:p.M170I,ENSG00000204290:ENST00000544175:exon5:c.G309A:p.M103I,ENSG00000204290:ENST00000374993:exon6:c.G1140A:p.M380I,ENSG00000204290:ENST00000374995:exon6:c.G858A:p.M286I,ENSG00000204290:ENST00000454136:exon6:c.G1140A:p.M380I	Score=387;Name=lod=50	NA	6p21.32	NA	NA	NA	NA	rs28362677	0.16	0.16	0.154	0.163938	0.163	0.1587	0.1599	0.1422	0.2025	0.16	0.18	0.18	0.12	0.1555	0.18	0.14	T	0.002	B	0.006	B	0.958	N	0.000	P	0.46	N	-0.91	T	-1.057	T	0.105	T	0.047	-0.108	3.471	3.3	0.756	-0.068	6.971	-0.107846	NA	0.35	0.144302	0.125057	NA	0.196	NA	8.8705314
765	6	32362745	32362745	G	A	exonic	BTNL2	NA	nonsynonymous SNV	BTNL2:NM_019602:exon6:c.C1136T:p.P379L	exonic	ENSG00000204290	NA	nonsynonymous SNV	ENSG00000204290:ENST00000414363:exon4:c.C506T:p.P169L,ENSG00000204290:ENST00000540315:exon4:c.C506T:p.P169L,ENSG00000204290:ENST00000544175:exon5:c.C305T:p.P102L,ENSG00000204290:ENST00000374993:exon6:c.C1136T:p.P379L,ENSG00000204290:ENST00000374995:exon6:c.C854T:p.P285L,ENSG00000204290:ENST00000454136:exon6:c.C1136T:p.P379L	NA	NA	6p21.32	NA	NA	NA	NA	rs28362678	0.16	0.16	0.158	0.164137	0.163	0.1597	0.1599	0.1422	0.2025	0.16	0.18	0.18	0.12	0.1556	0.18	1	T	0.0	B	0.0	B	0.003	N	1.000	P	-3.375	N	4.45	T	-1.035	T	0.000	T	0.099	-1.382	0.025	2.61	0.413	3.176	4.434	-1.381882	NA	1	0.144302	0.125057	NA	0.196	NA	8.8704314
765	5	149826526	149826526	C	T	exonic	RPS14	NA	synonymous SNV	RPS14:NM_001025070:exon3:c.G150A:p.K50K,RPS14:NM_001025071:exon3:c.G150A:p.K50K,RPS14:NM_005617:exon3:c.G150A:p.K50K	exonic	ENSG00000164587	NA	synonymous SNV	ENSG00000164587:ENST00000518139:exon2:c.G150A:p.K50K,ENSG00000164587:ENST00000312037:exon3:c.G150A:p.K50K,ENSG00000164587:ENST00000401695:exon3:c.G150A:p.K50K,ENSG00000164587:ENST00000407193:exon3:c.G150A:p.K50K,ENSG00000164587:ENST00000521466:exon3:c.G150A:p.K50K	Score=488;Name=lod=128	NA	5q33.1	Score=812;Name=V$RFX1_02	Name=Pol2-4H8,Pol2(phosphoS2),Pol2,HEY1	Name=4	NA	rs4841	0.24	0.24	0.237	0.268371	0.2575	0.2669	0.2161	0.2027	0.407	0.26	0.28	0.23	0.2	0.2726	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.730692	1.730692	NA	0.266628	0.214934	NA	0.341	NA	8.8699386
765	19	55019261	55019261	C	T	exonic	LAIR2	NA	stopgain	LAIR2:NM_002288:exon3:c.C226T:p.R76X,LAIR2:NM_021270:exon3:c.C226T:p.R76X	exonic	ENSG00000167618	NA	stopgain	ENSG00000167618:ENST00000301202:exon3:c.C226T:p.R76X,ENSG00000167618:ENST00000351841:exon3:c.C226T:p.R76X,ENSG00000167618:ENST00000412608:exon3:c.C208T:p.R70X	NA	NA	19q13.42	NA	NA	NA	NA	rs61737751	0.03	0.03	0.018	0.0301518	0.0527	0.0079	0.049	0.0023	0.0542	0.05	0.01	0.07	NA	0.0336	0.07	0.13	T	.	.	.	.	0.000	N	1.000	A	.	.	.	.	.	.	.	.	.	0.837	8.377	0.536	0.041	-0.940	4.916	0.836584	NA	0.39	0.044884	0.01044	NA	NA	NA	8.868816
765	11	5344592	5344592	A	C	exonic	OR51B2	NA	nonsynonymous SNV	OR51B2:NM_033180:exon1:c.T936G:p.S312R	exonic	ENSG00000184881	NA	nonsynonymous SNV	ENSG00000184881:ENST00000328813:exon1:c.T936G:p.S312R	NA	NA	11p15.4	NA	NA	NA	NA	rs11036814	0.12	0.12	0.106	0.0980431	0.165	0.123	0.1182	0.0113	0.1063	0.16	0.16	0.12	0.02	0.1425	0.16	0	D	0.004	B	0.003	B	0.635	U	1.000	P	0	N	9.79	T	-1.097	T	0.000	T	0.074	1.645	11.46	1.78	1.521	0.153	5.381	1.645446	1.645446	0.01	0.157435	0.040436	ID=COSM147118;OCCURENCE=1(stomach)	0.13	NA	8.8683984
766	2	26798893	26798893	A	T	exonic	C2orf70	NA	nonsynonymous SNV	C2orf70:NM_001105519:exon2:c.A198T:p.Q66H	exonic	ENSG00000173557	NA	nonsynonymous SNV	ENSG00000173557:ENST00000329615:exon2:c.A198T:p.Q66H,ENSG00000173557:ENST00000409392:exon3:c.A160T:p.R54W	NA	NA	2p23.3	NA	NA	NA	NA	rs13002673	0.33	0.33	0.291	0.334465	0.336	0.623	0.2262	0.0953	0.4356	0.34	0.6	0.2	0.11	0.3373	0.6	0.04	D	0.728	P	0.217	B	0.189	N	1.000	P	0	N	0.79	T	-0.958	T	0.000	T	0.044	0.4	6.171	-1.1	-0.206	-1.156	4.182	0.399809	NA	0.05	0.295885	0.12804	NA	0.312	NA	8.8641484
766	1	67288045	67288045	C	T	exonic	WDR78	NA	nonsynonymous SNV	WDR78:NM_024763:exon16:c.G2495A:p.R832Q	exonic	ENSG00000152763	NA	nonsynonymous SNV	ENSG00000152763:ENST00000464352:exon11:c.G1694A:p.R565Q,ENSG00000152763:ENST00000431318:exon15:c.G1634A:p.R545Q,ENSG00000152763:ENST00000371026:exon16:c.G2495A:p.R832Q	Score=358;Name=lod=38	NA	1p31.3	NA	NA	NA	NA	rs482082	0.54	0.54	0.549	0.514776	0.4761	0.6419	0.5447	0.5537	0.3497	0.46	0.67	0.5	0.56	0.5009	0.67	0.46	T	0.005	B	0.003	B	0.089	N	0.000	P	1.355	L	0.96	T	-1.057	T	0.031	T	0.076	0.256	5.386	2.34	0.728	1.551	6.452	0.256417	NA	0.17	0.492209	0.562869	NA	0.529	NA	8.8641244
766	19	46269313	46269313	G	C	exonic	SIX5	NA	nonsynonymous SNV	SIX5:NM_175875:exon3:c.C1666G:p.L556V	exonic	ENSG00000177045	NA	nonsynonymous SNV	ENSG00000177045:ENST00000317578:exon3:c.C1666G:p.L556V	NA	NA	19q13.32	Score=766;Name=V$MIF1_01	NA	NA	NA	rs2014377	0.89	0.89	0.871	0.903954	0.7913	0.9226	0.8977	0.9924	0.8855	0.8	0.92	0.91	0.99	0.854	0.99	1	T	0.0	B	0.0	B	0.851	N	1.000	P	-0.345	N	-2.63	D	-0.963	T	0.000	T	0.105	-1.194	0.075	2.09	0.490	1.156	7.236	-1.194238	NA	1	0.824029	0.966833	NA	0.877	NA	8.8640044
766	3	57882601	57882601	C	T	exonic	SLMAP	NA	synonymous SNV	SLMAP:NM_007159:exon14:c.C1341T:p.D447D	exonic	ENSG00000163681	NA	synonymous SNV	ENSG00000163681:ENST00000449503:exon13:c.C1278T:p.D426D,ENSG00000163681:ENST00000295952:exon14:c.C1341T:p.D447D,ENSG00000163681:ENST00000295951:exon15:c.C1341T:p.D447D,ENSG00000163681:ENST00000383718:exon15:c.C1380T:p.D460D,ENSG00000163681:ENST00000428312:exon15:c.C1392T:p.D464D	Score=567;Name=lod=270	NA	3p14.3	NA	NA	Name=2	NA	rs17058639	0.31	0.31	0.295	0.299521	0.2654	0.4752	0.3429	0.1218	0.363	0.28	0.49	0.34	0.13	0.2959	0.49	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.901	T	0.000	T	.	1.873	12.22	2.48	0.191	0.831	9.569	1.873458	1.873458	NA	0.241977	0.150023	NA	0.312	NA	8.8633896
766	19	42213872	42213872	T	C	exonic	CEACAM5	NA	nonsynonymous SNV	CEACAM5:NM_004363:exon2:c.T338C:p.I113T	exonic	ENSG00000105388,ENSG00000267881	NA	nonsynonymous SNV	ENSG00000105388:ENST00000221992:exon2:c.T338C:p.I113T,ENSG00000105388:ENST00000398599:exon2:c.T338C:p.I113T,ENSG00000105388:ENST00000405816:exon2:c.T338C:p.I113T,ENSG00000267881:ENST00000598976:exon2:c.T338C:p.I113T	NA	NA	19q13.2	NA	NA	NA	NA	rs35091611	0.12	0.12	0.106	0.129593	0.1958	NA	0.0865	0.2799	0.0225	0.17	NA	0.09	0.2	0.1374	0.23	1	T	0.024	B	0.013	B	.	.	1.000	P	-3.95	N	0.04	T	-0.979	T	0.000	T	0.019	-2.111	0.006	-6.19	-1.023	-0.653	2.196	-2.111474	NA	1	0.136977	0.231729	NA	0.21	NA	8.8631564
766	4	104013796	104013796	T	C	exonic	BDH2	NA	nonsynonymous SNV	BDH2:NM_020139:exon4:c.A209G:p.N70S	exonic	ENSG00000164039	NA	nonsynonymous SNV	ENSG00000164039:ENST00000296424:exon4:c.A209G:p.N70S,ENSG00000164039:ENST00000511354:exon4:c.A209G:p.N70S,ENSG00000164039:ENST00000504285:exon5:c.A209G:p.N70S,ENSG00000164039:ENST00000509245:exon5:c.A209G:p.N70S	Score=317;Name=lod=26	NA	4q24	NA	NA	NA	NA	rs1054707	0.13	0.13	0.12	0.158347	0.1501	0.1548	0.1772	0.0492	0.3047	0.15	0.14	0.17	0.05	0.1623	0.17	0.59	T	0.0	B	0.0	B	0.103	N	0.999	P	-0.72	N	2.0	T	-1.062	T	0.001	T	0.113	0.141	4.761	-2.62	-0.662	0.038	6.051	0.141483	NA	0.54	0.15814	0.066273	NA	0.145	NA	8.8627934
766	20	278806	278806	C	T	exonic	ZCCHC3	NA	synonymous SNV	ZCCHC3:NM_033089:exon1:c.C579T:p.S193S	exonic	ENSG00000177764	NA	synonymous SNV	ENSG00000177764:ENST00000382352:exon1:c.C579T:p.S193S	Score=532;Name=lod=193	NA	20p13	Score=860;Name=V$ZID_01	Name=Pol2,NRSF,Pol2(phosphoS2),HEY1,Sin3Ak-20	Name=147	NA	rs1057189	0.22	0.22	0.209	0.170327	0.2694	0.3294	0.1383	0.0098	0.1442	0.29	0.35	0.16	0.01	0.2523	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.363879	1.363879	NA	0.28227	0.046042	NA	0.123	NA	8.8626966
766	14	94088587	94088587	G	A	exonic	UNC79	NA	nonsynonymous SNV	UNC79:NM_020818:exon30:c.G4477A:p.V1493I	exonic	ENSG00000133958	NA	nonsynonymous SNV	ENSG00000133958:ENST00000256339:exon30:c.G4477A:p.V1493I,ENSG00000133958:ENST00000393151:exon30:c.G5008A:p.V1670I,ENSG00000133958:ENST00000555664:exon30:c.G5008A:p.V1670I,ENSG00000133958:ENST00000553484:exon31:c.G5074A:p.V1692I	NA	NA	14q32.12	Score=730;Name=V$PAX4_04	NA	NA	NA	rs4905081	0.39	0.39	0.338	0.371006	0.4821	0.38	0.5634	0.0915	0.4888	0.48	0.39	0.55	0.11	0.4734	0.55	0.58	T	0.0	B	0.001	B	0.802	N	1.000	P	0.345	N	2.27	T	-0.922	T	0.000	T	0.049	-2.27	0.004	-7.75	-1.468	0.115	8.034	-2.269817	NA	0.68	0.515465	0.167726	NA	0.413	NA	8.8623684
766	2	219266423	219266423	C	A	exonic	CTDSP1	NA	synonymous SNV	CTDSP1:NM_001206878:exon2:c.C204A:p.G68G,CTDSP1:NM_021198:exon2:c.C204A:p.G68G,CTDSP1:NM_182642:exon2:c.C204A:p.G68G	exonic	ENSG00000144579	NA	synonymous SNV	ENSG00000144579:ENST00000273062:exon2:c.C204A:p.G68G,ENSG00000144579:ENST00000443891:exon2:c.C204A:p.G68G	NA	NA	2q35	Score=738;Name=V$HOX13_01	NA	NA	NA	rs2227251	0.17	0.17	0.172	0.16853	0.2753	0.0714	0.232	0.0734	0.2423	0.26	0.09	0.23	0.08	0.2575	0.27	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.089	T	0.000	T	.	0.752	7.987	-10.2	-3.228	-1.017	6.494	0.752419	NA	NA	0.271512	0.093509	NA	0.217	NA	8.8623546
766	5	156898690	156898690	A	G	exonic	NIPAL4	NA	nonsynonymous SNV	NIPAL4:NM_001172292:exon4:c.A580G:p.R194G,NIPAL4:NM_001099287:exon5:c.A637G:p.R213G	exonic	ENSG00000172548	NA	nonsynonymous SNV	ENSG00000172548:ENST00000435489:exon4:c.A580G:p.R194G,ENSG00000172548:ENST00000311946:exon5:c.A637G:p.R213G	Score=511;Name=lod=159	NA	5q33.3	NA	NA	NA	NA	rs6860507	0.52	0.52	0.51	0.504593	0.4712	0.7232	0.4726	0.4334	0.4325	0.48	0.71	0.46	0.41	0.5347	0.71	0.61	T	0.0	B	0.0	B	0.000	N	0.000	P	-0.84	N	0.16	T	-0.962	T	0.000	T	0.049	0.267	5.444	4.78	0.765	1.582	12.451	0.267117	NA	0.54	0.465332	0.416503	NA	0.507	NA	8.8621014
766	2	73679866	73679866	T	C	exonic	ALMS1	NA	nonsynonymous SNV	ALMS1:NM_015120:exon8:c.T6209C:p.I2070T	exonic	ENSG00000116127	NA	nonsynonymous SNV	ENSG00000116127:ENST00000423048:exon1:c.T1043C:p.I348T,ENSG00000116127:ENST00000409009:exon7:c.T6083C:p.I2028T,ENSG00000116127:ENST00000264448:exon8:c.T6209C:p.I2070T,ENSG00000116127:ENST00000377715:exon8:c.T6209C:p.I2070T	NA	NA	2p13.1	NA	NA	NA	NA	rs10496192	0.1	0.1	0.106	0.103634	0.161	0.004	0.1772	0.0787	0.1288	0.16	0.01	0.16	0.08	0.1432	0.17	0.22	T	0.043	B	0.028	B	0.322	N	1.000	P	1.24	L	2.99	T	-1.004	T	0.000	T	0.101	-3.03	0.001	-5.09	-0.965	-0.190	2.743	-3.029968	NA	0	0.167283	0.080352	NA	0.138	NA	8.8618504
766	17	3632836	3632836	G	A	exonic	ITGAE	NA	nonsynonymous SNV	ITGAE:NM_002208:exon24:c.C2848T:p.R950W	exonic	ENSG00000083457	NA	nonsynonymous SNV	ENSG00000083457:ENST00000263087:exon24:c.C2848T:p.R950W	NA	NA	17p13.2	NA	NA	NA	NA	rs1716	0.23	0.23	0.244	0.265375	0.3221	0.2956	0.1599	0.0537	0.5368	0.33	0.3	0.18	0.05	0.3172	0.33	0.02	D	0.999	D	0.825	P	.	.	1.000	P	1.5	L	0.85	T	-1.044	T	0.000	T	0.102	2.991	15.97	-0.312	0.007	-0.208	1.828	2.990592	2.990592	0.02	0.333837	0.094644	NA	0.275	NA	8.8601964
766	22	29913272	29913272	C	T	exonic	THOC5	NA	nonsynonymous SNV	THOC5:NM_001002879:exon16:c.G1573A:p.V525I,THOC5:NM_003678:exon16:c.G1573A:p.V525I,THOC5:NM_001002877:exon17:c.G1573A:p.V525I,THOC5:NM_001002878:exon17:c.G1573A:p.V525I	exonic	ENSG00000100296	NA	nonsynonymous SNV	ENSG00000100296:ENST00000397871:exon16:c.G1573A:p.V525I,ENSG00000100296:ENST00000490103:exon16:c.G1573A:p.V525I,ENSG00000100296:ENST00000397872:exon17:c.G1573A:p.V525I,ENSG00000100296:ENST00000397873:exon17:c.G1573A:p.V525I	NA	NA	22q12.2	Score=747;Name=V$PPARG_02	NA	NA	NA	rs737976	0.52	0.52	0.52	0.445687	0.5129	0.7242	0.379	0.3298	0.2935	0.52	0.73	0.41	0.37	0.462	0.73	1	T	0.0	B	0.0	B	0.025	N	1.000	P	-0.55	N	1.9	T	-1.008	T	0.000	T	0.045	-1.519	0.016	-2.49	-1.032	0.249	7.042	-1.518513	NA	1	0.502326	0.353155	NA	0.543	NA	8.8561074
766	11	6532519	6532519	C	T	exonic	DNHD1	NA	nonsynonymous SNV	DNHD1:NM_173589:exon6:c.C1252T:p.H418Y,DNHD1:NM_144666:exon7:c.C1252T:p.H418Y	exonic	ENSG00000179532	NA	nonsynonymous SNV	ENSG00000179532:ENST00000527990:exon5:c.C1252T:p.H418Y,ENSG00000179532:ENST00000354685:exon6:c.C1252T:p.H418Y,ENSG00000179532:ENST00000254579:exon7:c.C1252T:p.H418Y	NA	NA	11p15.4	NA	NA	NA	NA	rs4758423	0.24	0.24	0.237	0.220447	0.3549	0.128	0.3199	0.1377	0.2188	0.34	0.15	0.33	0.13	0.2929	0.34	0.26	T	0.837	P	0.193	B	0.191	N	1.000	P	0.695	N	2.7	T	-0.990	T	0.000	T	0.092	1.258	10.1	4.41	1.372	0.136	8.168	1.257615	1.257615	0.11	0.329493	0.166742	ID=COSM1179744,COSM1179745;OCCURENCE=1(prostate)	0.268	NA	8.8560404
767	6	51914956	51914956	G	A	exonic	PKHD1	NA	nonsynonymous SNV	PKHD1:NM_138694:exon22:c.C2278T:p.R760C,PKHD1:NM_170724:exon22:c.C2278T:p.R760C	exonic	ENSG00000170927	NA	nonsynonymous SNV	ENSG00000170927:ENST00000340994:exon22:c.C2278T:p.R760C,ENSG00000170927:ENST00000371117:exon22:c.C2278T:p.R760C	NA	NA	6p12.2	NA	NA	NA	NA	rs9370096	0.41	0.41	0.348	0.355831	0.503	0.4048	0.6009	0.1097	0.3129	0.51	0.41	0.59	0.13	0.4652	0.59	0.19	T	0.013	B	0.004	B	0.102	N	0.007	P	-0.57	N	-2.06	D	-1.013	T	0.120	T	0.081	2.23	13.42	-6.31	-0.738	-0.487	7.059	2.230413	2.230413	0.11	0.510233	0.151384	NA	0.471	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000082536.1;CLNDSDB=.;CLNDSDBID=.	8.8549004
767	12	103696182	103696182	T	G	exonic	C12orf42	NA	nonsynonymous SNV	C12orf42:NM_001099336:exon6:c.A787C:p.S263R,C12orf42:NM_198521:exon6:c.A787C:p.S263R	exonic	ENSG00000179088	NA	nonsynonymous SNV	ENSG00000179088:ENST00000378113:exon6:c.A787C:p.S263R,ENSG00000179088:ENST00000548883:exon6:c.A787C:p.S263R,ENSG00000179088:ENST00000548048:exon9:c.A586C:p.S196R	NA	NA	12q23.2	NA	NA	Name=8	NA	rs79387839	0.13	0.13	0.119	0.126198	0.17	0.1319	0.0965	0.0477	0.2025	0.17	0.15	0.1	0.06	0.1497	0.17	0.14	T	0.005	B	0.005	B	0.517	N	1.000	P	0.46	N	0.32	T	-1.071	T	0.000	T	0.085	1.324	10.34	-3.12	-0.673	0.094	0.507	1.324188	1.324188	0.01	0.158779	0.071703	NA	0.116	NA	8.8548544
767	16	71610276	71610276	G	A	exonic	TAT	NA	nonsynonymous SNV	TAT:NM_000353:exon2:c.C43T:p.P15S	exonic	ENSG00000198650	NA	nonsynonymous SNV	ENSG00000198650:ENST00000355962:exon2:c.C43T:p.P15S	NA	NA	16q22.2	NA	NA	NA	NA	rs74344827	0.13	0.13	0.114	0.14357	0.163	0.0516	0.0836	0.1831	0.2076	0.18	0.06	0.1	0.15	0.1511	0.2	0.25	T	0.248	B	0.067	B	0.062	N	1.000	P	0.205	N	-1.28	T	-1.095	T	0.000	T	0.041	0.447	6.429	2.74	0.885	1.152	7.819	0.447277	NA	0.53	0.165116	0.196542	NA	0.109	NA	8.8541174
767	20	20033319	20033319	A	G	exonic	CRNKL1	NA	nonsynonymous SNV	CRNKL1:NM_016652:exon2:c.T151C:p.F51L	exonic	ENSG00000101343	NA	nonsynonymous SNV	ENSG00000101343:ENST00000377327:exon2:c.T115C:p.F39L,ENSG00000101343:ENST00000377340:exon2:c.T151C:p.F51L,ENSG00000101343:ENST00000490910:exon2:c.T115C:p.F39L	NA	NA	20p11.23	NA	Name=Max,CTCF,SREBP1,ETS1,Mxi1_(bHLH),Sin3Ak-20,HA-E2F1,KAP1,c-Fos	Name=148	NA	rs2273058	0.54	0.54	0.533	0.519968	0.492	0.7024	0.549	0.4425	0.4448	0.49	0.7	0.52	0.44	0.5166	0.7	0.44	T	0.009	B	0.003	B	0.000	N	1.000	P	0	N	1.56	T	-0.945	T	0.000	T	0.04	1.697	11.63	0.073	-0.104	1.307	4.565	1.697423	1.697423	1	0.4732	0.439855	NA	0.514	NA	8.8515334
767	7	100607871	100607871	C	T	intergenic	ACHE,MUC12	dist=114330;dist=5033	NA	NA	exonic	ENSG00000169894	NA	nonsynonymous SNV	ENSG00000169894:ENST00000422757:exon4:c.C488T:p.A163V,ENSG00000169894:ENST00000319509:exon5:c.C2018T:p.A673V	NA	NA	7q22.1	NA	NA	NA	NA	rs6960868	NA	NA	0.433	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4855	0.24	0.33	T	0.469	P	0.115	B	.	.	.	.	0.69	N	1.38	T	-1.082	T	0.037	T	0.155	0.04	4.222	-5.92	-2.696	-2.266	1.671	0.040139	NA	0.27	NA	NA	NA	0.254	NA	8.8478334
767	19	8326866	8326866	C	T	exonic	CERS4	NA	nonsynonymous SNV	CERS4:NM_024552:exon12:c.C1058T:p.A353V	exonic	ENSG00000090661	NA	nonsynonymous SNV	ENSG00000090661:ENST00000559336:exon10:c.C794T:p.A265V,ENSG00000090661:ENST00000559450:exon11:c.C1058T:p.A353V,ENSG00000090661:ENST00000251363:exon12:c.C1058T:p.A353V,ENSG00000090661:ENST00000558331:exon12:c.C905T:p.A302V	NA	NA	19p13.2	NA	NA	NA	NA	rs17160348	0.14	0.14	0.106	0.126597	0.161	0.0883	0.1772	0.1271	0.0941	0.17	0.07	0.19	0.16	0.1606	0.19	0.2	T	0.001	B	0.0	B	0.279	N	1.000	P	0.345	N	3.32	T	-0.920	T	0.000	T	0.086	3.773	19.15	3.04	0.118	2.819	4.431	3.772612	3.772612	0.21	0.16407	0.133681	NA	0.101	NA	8.8476634
767	14	81744736	81744736	A	G	exonic	STON2	NA	nonsynonymous SNV	STON2:NM_033104:exon5:c.T919C:p.S307P,STON2:NM_001256430:exon6:c.T919C:p.S307P	exonic	ENSG00000140022	NA	nonsynonymous SNV	ENSG00000140022:ENST00000267540:exon4:c.T919C:p.S307P,ENSG00000140022:ENST00000555447:exon6:c.T919C:p.S307P	Score=313;Name=lod=25	NA	14q31.1	NA	NA	NA	NA	rs3813535	0.76	0.76	0.756	0.745008	0.8241	0.5397	0.7939	0.8411	0.7106	0.83	0.6	0.81	0.81	0.8101	0.85	1	T	0.0	B	0.0	B	0.002	N	0.999	P	-1.78	N	1.63	T	-0.960	T	0.000	T	0.195	-0.686	1.017	6.17	1.644	4.031	15.859	-0.686078	NA	1	0.852093	0.844757	NA	0.841	NA	8.8470404
767	12	96131895	96131895	A	G	exonic	NTN4	NA	nonsynonymous SNV	NTN4:NM_021229:exon3:c.T613C:p.Y205H	exonic	ENSG00000074527	NA	nonsynonymous SNV	ENSG00000074527:ENST00000343702:exon3:c.T613C:p.Y205H,ENSG00000074527:ENST00000538383:exon3:c.T502C:p.Y168H,ENSG00000074527:ENST00000547980:exon3:c.T502C:p.Y168H,ENSG00000074527:ENST00000553059:exon3:c.T613C:p.Y205H,ENSG00000074527:ENST00000344911:exon4:c.T502C:p.Y168H	NA	NA	12q22	NA	Name=SP1,HNF4A,TCF4,HNF4G_(SC-6558),HNF4A_(H-171)	Name=8	NA	rs17288108	0.09	0.09	0.073	0.0732827	0.1849	0.0238	0.0908	0.0038	0.091	0.19	0.01	0.1	0.002	0.1263	0.19	0.55	T	0.001	B	0.001	B	0.015	N	1.000	P	-0.69	N	-0.9	T	-1.098	T	0.000	T	0.229	0.163	4.879	1.57	0.895	-0.014	4.696	0.163335	NA	0.54	0.175233	0.031094	NA	0.08	NA	8.8469004
768	17	47007963	47007963	C	T	exonic	SNF8	NA	synonymous SNV	SNF8:NM_007241:exon8:c.G651A:p.L217L	exonic	ENSG00000159210	NA	synonymous SNV	ENSG00000159210:ENST00000290330:exon8:c.G648A:p.L216L,ENSG00000159210:ENST00000502492:exon8:c.G651A:p.L217L	Score=635;Name=lod=510	NA	17q21.32	Score=862;Name=V$TAL1ALPHAE47_01	Name=Pol2-4H8,Pol2	Name=14	NA	rs2270576	0.24	0.24	0.202	0.233427	0.2664	0.1746	0.4063	0.1959	0.1881	0.26	0.16	0.4	0.2	0.275	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.028753	NA	NA	0.280698	0.230595	NA	0.333	NA	8.8445686
768	1	117487711	117487711	T	A	exonic	PTGFRN	NA	nonsynonymous SNV	PTGFRN:NM_020440:exon3:c.T829A:p.S277T	exonic	ENSG00000134247	NA	nonsynonymous SNV	ENSG00000134247:ENST00000393203:exon3:c.T829A:p.S277T	Score=317;Name=lod=26	NA	1p13.1	Score=767;Name=V$PAX5_02	NA	NA	NA	rs4546904	0.78	0.78	0.583	0.859425	0.8966	0.8452	0.9222	0.7549	0.9325	0.81	0.81	0.85	0.63	0.8916	0.85	1	T	0.0	B	0.001	B	0.000	N	1.000	P	-0.975	N	3.82	T	-0.918	T	0.001	T	0.05	-0.045	3.785	5.49	0.930	4.215	10.223	-0.044773	NA	1	0.701256	0.521562	NA	NA	NA	8.8438774
768	1	12009956	12009956	G	A	exonic	PLOD1	NA	nonsynonymous SNV	PLOD1:NM_000302:exon3:c.G295A:p.A99T	exonic	ENSG00000083444	NA	nonsynonymous SNV	ENSG00000083444:ENST00000196061:exon3:c.G295A:p.A99T,ENSG00000083444:ENST00000429000:exon3:c.G295A:p.A99T,ENSG00000083444:ENST00000376369:exon4:c.G436A:p.A146T,ENSG00000083444:ENST00000449038:exon4:c.G436A:p.A146T	NA	NA	1p36.22	NA	NA	NA	NA	rs7551175	0.25	0.25	0.277	0.299521	0.1461	0.2698	0.1282	0.5749	0.2372	0.15	0.23	0.13	0.51	0.1934	0.53	1	T	0.0	B	0.0	B	0.144	N	1.000	P	-2.63	N	1.99	T	-0.920	T	0.000	T	0.43	-0.548	1.515	2.9	0.163	1.447	7.715	-0.548384	NA	0.82	0.150349	0.534725	NA	0.225	NA	8.8434844
768	6	30899524	30899524	T	C	exonic	SFTA2	NA	nonsynonymous SNV	SFTA2:NM_205854:exon2:c.A110G:p.N37S	exonic	ENSG00000196260	NA	nonsynonymous SNV	ENSG00000196260:ENST00000359086:exon2:c.A110G:p.N37S	NA	NA	6p21.33	NA	NA	NA	NA	rs3131787	0.11	0.11	0.128	0.0822684	0.1551	0.0218	0.0663	0.0968	0.0613	0.17	0.03	0.07	0.14	0.1416	0.19	0.16	T	0.408	B	0.065	B	.	.	1.000	P	.	.	0.83	T	-1.091	T	0.035	T	0.062	2.306	13.67	2.96	0.649	1.306	5.955	2.305613	2.305613	0.23	0.193245	0.121443	NA	0.145	NA	8.8433884
768	3	191097966	191097966	T	C	exonic	CCDC50	NA	nonsynonymous SNV	CCDC50:NM_174908:exon6:c.T467C:p.M156T,CCDC50:NM_178335:exon7:c.T995C:p.M332T	exonic	ENSG00000152492	NA	nonsynonymous SNV	ENSG00000152492:ENST00000392455:exon6:c.T467C:p.M156T,ENSG00000152492:ENST00000392456:exon7:c.T995C:p.M332T	NA	NA	3q28	Score=774;Name=V$PAX6_01	NA	Name=19	NA	rs293813	0.63	0.63	0.645	0.644569	0.495	0.6865	0.5764	0.854	0.5204	0.5	0.65	0.58	0.84	0.5372	0.84	0.5	T	0.0	B	0.001	B	0.875	N	1.000	P	-0.17	N	1.6	T	-1.007	T	0.000	T	0.062	-0.369	2.262	0.585	-0.118	0.488	8.529	-0.368957	NA	0.57	0.461047	0.790286	ID=COSM149545;OCCURENCE=1(stomach)	0.514	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000041451.1;CLNDSDB=.;CLNDSDBID=.	8.8400864
768	10	81371729	81371729	C	G	exonic	SFTPA1	NA	nonsynonymous SNV	SFTPA1:NM_001164647:exon2:c.C148G:p.L50V,SFTPA1:NM_001093770:exon3:c.C193G:p.L65V,SFTPA1:NM_001164644:exon3:c.C148G:p.L50V,SFTPA1:NM_005411:exon3:c.C148G:p.L50V	exonic	ENSG00000122852	NA	nonsynonymous SNV	ENSG00000122852:ENST00000428376:exon2:c.C148G:p.L50V,ENSG00000122852:ENST00000429958:exon2:c.C148G:p.L50V,ENSG00000122852:ENST00000372308:exon3:c.C148G:p.L50V,ENSG00000122852:ENST00000398636:exon3:c.C148G:p.L50V,ENSG00000122852:ENST00000419470:exon3:c.C193G:p.L65V,ENSG00000122852:ENST00000439264:exon3:c.C148G:p.L50V	Score=449;Name=lod=89	NA	10q22.3	NA	NA	NA	NA	rs1136450	0.41	0.41	0.293	NA	NA	NA	NA	NA	NA	0.53	0.29	0.42	0.34	0.4942	0.53	1	T	0.0	B	0.0	B	0.403	N	0.212	P	0.345	N	2.53	T	-0.933	T	0.000	T	0.092	-2.002	0.007	-2.96	-0.788	-0.414	4.469	-2.002151	NA	1	NA	NA	NA	0.565	NA	8.8391334
768	22	22869209	22869209	C	G	exonic	ZNF280A	NA	nonsynonymous SNV	ZNF280A:NM_080740:exon2:c.G746C:p.G249A	exonic	ENSG00000169548	NA	nonsynonymous SNV	ENSG00000169548:ENST00000302097:exon2:c.G746C:p.G249A	NA	NA	22q11.22	NA	NA	NA	NA	rs362124	0.53	0.53	0.476	0.473442	0.7038	0.4147	0.732	0.2383	0.4315	0.7	0.43	0.7	0.26	0.6102	0.7	0.09	T	0.584	P	0.196	B	.	.	1.000	P	1.905	M	5.21	T	-1.078	T	0.000	T	0.037	1.092	9.455	-2.85	-0.404	-1.278	2.525	1.091525	NA	0.67	0.680814	0.307989	NA	0.406	NA	8.8385194
768	1	47799639	47799639	G	C	exonic	CMPK1	NA	nonsynonymous SNV	CMPK1:NM_001136140:exon1:c.G22C:p.G8R,CMPK1:NM_016308:exon1:c.G22C:p.G8R	exonic	ENSG00000162368	NA	nonsynonymous SNV	ENSG00000162368:ENST00000371871:exon1:c.G22C:p.G8R,ENSG00000162368:ENST00000371873:exon1:c.G22C:p.G8R,ENSG00000162368:ENST00000450808:exon1:c.G22C:p.G8R,ENSG00000162368:ENST00000471289:exon1:c.G22C:p.G8R	NA	NA	1p33	NA	Name=HMGN3,TAF1,Pol2,HEY1	Name=148	NA	rs7543016	0.59	0.59	0.57	0.596446	0.4602	0.5843	0.5893	0.8245	0.4458	0.47	0.59	0.55	0.79	0.5647	0.79	0.7	T	0.0	B	0.0	B	0.038	N	1.000	P	0	N	0.15	T	-0.952	T	0.000	T	0.038	-0.146	3.287	2.91	0.238	0.519	5.518	-0.145854	NA	0.51	0.470484	0.762333	NA	NA	NA	8.8379494
768	16	75238103	75238103	C	T	exonic	CTRB2	NA	nonsynonymous SNV	CTRB2:NM_001025200:exon7:c.G748A:p.A250T	exonic	ENSG00000168928	NA	nonsynonymous SNV	ENSG00000168928:ENST00000562106:exon4:c.G463A:p.A155T,ENSG00000168928:ENST00000303037:exon7:c.G748A:p.A250T	Score=361;Name=lod=39	NA	16q23.1	NA	NA	NA	NA	rs4737	0.82	0.82	0.799	0.828874	0.829	0.998	0.8862	0.6036	0.9182	0.82	1	0.88	0.58	0.8474	1	1	T	0.0	B	0.001	B	0.000	N	1.000	P	0.5	N	-3.15	D	-0.906	T	0.000	T	0.054	-0.815	0.636	4.09	0.573	2.536	5.027	-0.815252	NA	1	0.820116	0.626024	NA	0.746	NA	8.8368174
768	21	34925689	34925689	G	A	exonic	SON	NA	synonymous SNV	SON:NM_032195:exon3:c.G4152A:p.L1384L,SON:NM_138927:exon3:c.G4152A:p.L1384L	exonic	ENSG00000159140	NA	synonymous SNV	ENSG00000159140:ENST00000290239:exon3:c.G4152A:p.L1384L,ENSG00000159140:ENST00000300278:exon3:c.G4152A:p.L1384L,ENSG00000159140:ENST00000356577:exon3:c.G4152A:p.L1384L,ENSG00000159140:ENST00000381679:exon3:c.G4152A:p.L1384L,ENSG00000159140:ENST00000455528:exon3:c.G4152A:p.L1384L	NA	NA	21q22.11	NA	NA	NA	NA	rs61739710	0.19	0.19	0.182	0.175919	0.3082	0.1637	0.2421	0.0189	0.2178	0.3	0.15	0.27	0.03	0.2447	0.3	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	-0.073	3.643	-5.81	-1.193	-1.279	5.172	-0.073046	NA	NA	0.277326	0.063777	NA	0.08	NA	8.8364406
768	10	101977883	101977883	C	T	exonic	CHUK	NA	nonsynonymous SNV	CHUK:NM_001278:exon9:c.G802A:p.V268I	exonic	ENSG00000213341	NA	nonsynonymous SNV	ENSG00000213341:ENST00000370397:exon9:c.G802A:p.V268I	Score=523;Name=lod=178	NA	10q24.31	NA	NA	NA	NA	rs2230804	0.56	0.56	0.592	0.545727	0.5179	0.5109	0.4294	0.7965	0.3538	0.52	0.5	0.49	0.76	0.4791	0.76	0.26	T	0.0	B	0.001	B	0.000	N	1.000	P	0.405	N	-0.53	T	-0.950	T	0.000	T	0.04	1.9	12.31	4.92	0.543	2.572	9.007	1.899988	1.899988	0.52	0.501047	0.743078	NA	0.522	NA	8.8352864
768	6	24403455	24403455	C	T	exonic	MRS2	NA	nonsynonymous SNV	MRS2:NM_020662:exon1:c.C181T:p.R61C	exonic	ENSG00000124532	NA	nonsynonymous SNV	ENSG00000124532:ENST00000274747:exon1:c.C181T:p.R61C,ENSG00000124532:ENST00000378353:exon1:c.C181T:p.R61C,ENSG00000124532:ENST00000378386:exon1:c.C181T:p.R61C,ENSG00000124532:ENST00000443868:exon1:c.C181T:p.R61C,ENSG00000124532:ENST00000535061:exon1:c.C181T:p.R61C	NA	NA	6p22.3	NA	Name=CHD2_(N-1250),RFX5_(N-494),ZNF263,Sin3Ak-20	Name=145	NA	rs11695	0.13	0.13	0.149	0.113419	0.1938	0.1488	0.0965	0.0045	0.1534	0.2	0.16	0.09	0.01	0.161	0.2	0.14	T	0.004	B	0.002	B	0.828	N	1.000	P	0	N	1.42	T	-1.013	T	0.019	T	0.162	1.559	11.17	-1.2	0.057	-0.374	1.176	1.559225	1.559225	0.09	0.143256	0.029358	NA	0.08	NA	8.8352774
769	6	78172260	78172260	C	G	exonic	HTR1B	NA	synonymous SNV	HTR1B:NM_000863:exon1:c.G861C:p.V287V	exonic	ENSG00000135312	NA	synonymous SNV	ENSG00000135312:ENST00000369947:exon1:c.G861C:p.V287V	Score=646;Name=lod=563	NA	6q14.1	Score=768;Name=V$PPARA_01	Name=CTCF,GATA-2	Name=58	NA	rs6296	0.35	0.35	0.316	0.338059	0.2634	0.5089	0.4049	0.2436	0.319	0.28	0.54	0.4	0.22	0.3064	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.275119	NA	NA	0.262442	0.224013	NA	0.304	NA	8.8344246
769	15	75932129	75932129	G	T	exonic	IMP3	NA	synonymous SNV	IMP3:NM_018285:exon1:c.C381A:p.A127A	exonic	ENSG00000177971	NA	synonymous SNV	ENSG00000177971:ENST00000403490:exon1:c.C381A:p.A127A,ENSG00000177971:ENST00000314852:exon2:c.C381A:p.A127A	Score=594;Name=lod=347	NA	15q24.2	Score=808;Name=V$HTF_01	Name=USF-1,c-Myc,HEY1,Egr-1,Pol2-4H8,ZNF263,Max,Oct-2,Mxi1_(bHLH),Pol2,HNF4A,YY1_(C-20),E2F6,USF1_(SC-8983),TAF1,POU2F2,HMGN3,USF2	Name=36	NA	rs13737	0.37	0.37	0.392	0.39397	0.2704	0.369	0.3876	0.5151	0.3875	0.25	0.41	0.37	0.53	0.2961	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.073347	NA	NA	0.266069	0.477924	ID=COSM1374626;OCCURENCE=1(large_intestine)	0.275	NA	8.8340976
769	7	100551773	100551773	C	A	intergenic	ACHE,MUC12	dist=58232;dist=61131	NA	NA	exonic	ENSG00000169894	NA	nonsynonymous SNV	ENSG00000169894:ENST00000319509:exon1:c.C524A:p.T175K	NA	NA	7q22.1	NA	NA	NA	NA	rs73398734	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4993	0.49	0.69	T	0.94	P	0.278	B	.	.	0.729	N	0	N	3.14	T	-0.984	T	0.008	T	0.034	-0.927	0.385	-2.25	-1.383	-1.780	3.245	-0.926627	NA	0.27	NA	NA	NA	0.493	NA	8.8340334
769	12	12301898	12301898	C	T	exonic	LRP6	NA	nonsynonymous SNV	LRP6:NM_002336:exon14:c.G3184A:p.V1062I	exonic	ENSG00000070018	NA	nonsynonymous SNV	ENSG00000070018:ENST00000261349:exon14:c.G3184A:p.V1062I,ENSG00000070018:ENST00000543091:exon14:c.G3184A:p.V1062I	Score=582;Name=lod=310	NA	12p13.2	NA	NA	NA	NA	rs2302685	0.88	0.88	0.87	0.885583	0.83	0.9196	0.9121	0.8691	0.911	0.82	0.92	0.91	0.89	0.8474	0.92	1	T	0.0	B	0.0	B	0.000	N	0.000	P	-1.285	N	-2.67	D	-0.936	T	0.000	T	0.14	0.954	8.892	5.45	0.901	5.988	11.444	0.954292	NA	1	0.822326	0.874489	NA	0.826	NA	8.8336074
769	11	48347100	48347100	C	T	exonic	OR4C3	NA	nonsynonymous SNV	OR4C3:NM_001004702:exon1:c.C608T:p.A203V	exonic	ENSG00000176547	NA	nonsynonymous SNV	ENSG00000176547:ENST00000319856:exon1:c.C608T:p.A203V	NA	NA	11p11.2	NA	NA	NA	NA	rs73465905	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.4998	0.5	0.27	T	0.0	B	0.001	B	0.006	N	1.000	N	-0.04	N	8.83	T	-1.021	T	0.000	T	0.096	1.373	10.52	4.63	1.045	0.788	10.066	1.373492	1.373492	0.13	NA	NA	NA	0.391	NA	8.8335334
769	17	51901703	51901703	C	G	exonic	KIF2B	NA	nonsynonymous SNV	KIF2B:NM_032559:exon1:c.C1309G:p.R437G	exonic	ENSG00000141200	NA	nonsynonymous SNV	ENSG00000141200:ENST00000268919:exon1:c.C1309G:p.R437G	Score=243;Name=lod=13	NA	17q22	NA	NA	NA	NA	rs4561519	0.81	0.81	0.823	0.76238	0.841	0.8145	0.7651	0.789	0.59	0.84	0.8	0.78	0.8	0.806	0.85	1	T	0.0	B	0.0	B	0.009	N	1.000	P	-1.29	N	-0.9	T	-0.959	T	0.000	T	0.036	-1.97	0.007	5.73	1.569	7.980	9.862	-1.970271	NA	1	0.852907	0.80118	NA	0.797	NA	8.8334264
769	6	11105483	11105483	C	A	exonic	ERVFRD-1	NA	nonsynonymous SNV	ERVFRD-1:NM_207582:exon2:c.G61T:p.D21Y	exonic	ENSG00000244476	NA	nonsynonymous SNV	ENSG00000244476:ENST00000542862:exon1:c.G61T:p.D21Y,ENSG00000244476:ENST00000472091:exon2:c.G61T:p.D21Y	NA	NA	6p24.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00003313	0.011	0.04	D	0.743	P	0.095	B	.	.	0.670	N	0.345	N	2.43	T	-0.962	T	0.007	T	0.388	1.914	12.36	0.235	0.308	0.305	.	1.913789	1.913789	NA	NA	NA	NA	0.007	NA	8.8333003
769	16	71318001	71318001	G	T	exonic	FTSJD1	NA	nonsynonymous SNV	FTSJD1:NM_001099642:exon3:c.C1823A:p.T608K,FTSJD1:NM_018348:exon3:c.C1823A:p.T608K	exonic	ENSG00000180917	NA	nonsynonymous SNV	ENSG00000180917:ENST00000338099:exon3:c.C1823A:p.T608K,ENSG00000180917:ENST00000434935:exon3:c.C1823A:p.T608K	NA	NA	16q22.2	NA	NA	NA	NA	rs3096381	0.11	0.11	0.079	0.113019	0.1879	0.0288	0.1354	0.0651	0.1718	0.16	0.03	0.17	0.07	0.1417	0.17	0.12	T	0.09	B	0.014	B	0.182	N	1.000	P	0.55	N	2.56	T	-0.985	T	0.000	T	0.054	-0.51	1.669	2.66	0.204	1.210	8.442	-0.509532	NA	0.12	0.171163	0.078708	NA	0.116	NA	8.8325704
769	11	433417	433417	C	T	exonic	ANO9	NA	nonsynonymous SNV	ANO9:NM_001012302:exon4:c.G247A:p.D83N	exonic	ENSG00000185101	NA	nonsynonymous SNV	ENSG00000185101:ENST00000332826:exon4:c.G247A:p.D83N	NA	NA	11p15.5	NA	NA	NA	NA	rs150163423	NA	NA	NA	0.000199681	0.001	NA	NA	NA	NA	NA	NA	NA	NA	0.0008	0.0009	0.02	D	0.454	P	0.115	B	0.000	N	1.000	N	0.805	L	-0.27	T	-0.922	T	0.169	T	0.068	-0.754	0.806	0.433	0.114	-0.783	3.842	-0.75377	NA	0.12	0.00093	0.000454	NA	NA	NA	8.8306034
769	10	43292647	43292647	A	G	exonic	BMS1	NA	nonsynonymous SNV	BMS1:NM_014753:exon10:c.A1955G:p.K652R	exonic	ENSG00000165733	NA	nonsynonymous SNV	ENSG00000165733:ENST00000374518:exon10:c.A1955G:p.K652R	NA	NA	10q11.21	NA	NA	NA	NA	rs787795	0.18	0.18	0.16	0.180511	0.1571	0.1835	0.2392	0.1725	0.1708	0.16	0.2	0.2	0.16	0.1841	0.21	0.48	T	0.001	B	0.001	B	0.115	N	1.000	P	1.1	L	1.73	T	-0.998	T	0.000	T	0.012	0.909	8.696	2.61	0.851	1.212	7.514	0.908575	NA	0.26	0.161672	0.168765	NA	0.159	NA	8.8304614
769	11	48146622	48146622	G	A	exonic	PTPRJ	NA	nonsynonymous SNV	PTPRJ:NM_001098503:exon6:c.G977A:p.R326Q,PTPRJ:NM_002843:exon6:c.G977A:p.R326Q	exonic	ENSG00000149177	NA	nonsynonymous SNV	ENSG00000149177:ENST00000418331:exon6:c.G977A:p.R326Q,ENSG00000149177:ENST00000440289:exon6:c.G977A:p.R326Q	NA	NA	11p11.2	NA	NA	NA	NA	rs1503185	0.22	0.22	0.216	0.242812	0.162	0.3165	0.1297	0.3056	0.2454	0.16	0.26	0.14	0.31	0.1807	0.31	0.67	T	0.008	B	0.001	B	.	.	1.000	P	0.805	L	3.64	T	-0.987	T	0.000	T	0.012	-0.17	3.17	-10.3	-5.127	-4.801	5.750	-0.170315	NA	0.46	0.161354	0.252385	NA	0.167	NA	8.8292794
769	16	334580	334580	G	C	exonic	PDIA2	NA	synonymous SNV	PDIA2:NM_006849:exon2:c.G393C:p.P131P	exonic	ENSG00000185615	NA	synonymous SNV	ENSG00000185615:ENST00000219406:exon2:c.G393C:p.P131P,ENSG00000185615:ENST00000404312:exon2:c.G393C:p.P131P	NA	NA	16p13.3	NA	NA	NA	NA	rs432925	0.23	0.23	0.237	0.246406	0.2913	0.119	0.2089	0.32	0.2587	0.28	0.12	0.22	0.29	0.2602	0.29	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.026	T	0.000	T	.	-1.171	0.088	-8.93	-2.615	-1.350	2.416	-1.171117	NA	NA	0.286307	0.290939	NA	0.275	NA	8.8288596
769	17	39114962	39114962	C	T	exonic	KRT39	NA	nonsynonymous SNV	KRT39:NM_213656:exon7:c.G1367A:p.R456Q	exonic	ENSG00000196859	NA	nonsynonymous SNV	ENSG00000196859:ENST00000355612:exon7:c.G1367A:p.R456Q	NA	NA	17q21.2	Score=770;Name=V$PAX2_01	NA	NA	NA	rs7213256	0.21	0.21	0.218	0.249201	0.161	0.0327	0.1902	0.5408	0.2106	0.16	0.04	0.18	0.53	0.1848	0.53	0.51	T	0.226	B	0.011	B	0.003	N	1.000	P	1.525	L	-1.57	D	-0.930	T	0.000	T	0.108	3.009	16.04	1.04	0.280	0.213	5.887	3.008632	3.008632	0.36	0.158752	0.473218	ID=COSM1383052;OCCURENCE=1(large_intestine)	0.225	NA	8.8287814
769	6	43492578	43492578	G	A	exonic	XPO5	NA	synonymous SNV	XPO5:NM_020750:exon30:c.C3303T:p.Y1101Y	exonic	ENSG00000124571	NA	synonymous SNV	ENSG00000124571:ENST00000265351:exon30:c.C3303T:p.Y1101Y	Score=579;Name=lod=302	NA	6p21.1	NA	Name=Pol2-4H8	NA	NA	rs2257082	0.35	0.35	0.326	0.32488	0.2853	0.62	0.2983	0.1611	0.3016	0.29	0.61	0.29	0.18	0.2948	0.61	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.783	T	0.145	T	.	-0.097	3.527	-6.07	-0.948	-0.282	19.365	-0.096513	NA	NA	0.258444	0.173077	NA	0.348	NA	8.8281226
769	8	67380528	67380528	T	C	exonic	ADHFE1	NA	nonsynonymous SNV	ADHFE1:NM_144650:exon14:c.T1345C:p.C449R	exonic	ENSG00000147576	NA	nonsynonymous SNV	ENSG00000147576:ENST00000396623:exon14:c.T1345C:p.C449R,ENSG00000147576:ENST00000415254:exon15:c.T1201C:p.C401R	Score=478;Name=lod=117	NA	8q13.1	NA	NA	NA	NA	rs1060242	0.55	0.55	0.547	0.579473	0.502	0.381	0.6614	0.7496	0.5757	0.5	0.41	0.64	0.74	0.5313	0.74	1	T	0.0	B	0.0	B	0.000	N	0.000	P	-3.515	N	1.31	T	-0.915	T	0.000	T	0.104	-0.403	2.114	3.68	0.295	1.922	10.803	-0.402972	NA	1	0.473721	0.718112	NA	0.543	NA	8.8263124
769	17	46926615	46926615	G	A	exonic	CALCOCO2	NA	nonsynonymous SNV	CALCOCO2:NM_001261395:exon4:c.G203A:p.G68E,CALCOCO2:NM_005831:exon5:c.G419A:p.G140E,CALCOCO2:NM_001261390:exon6:c.G491A:p.G164E,CALCOCO2:NM_001261391:exon6:c.G482A:p.G161E	exonic	ENSG00000136436	NA	nonsynonymous SNV	ENSG00000136436:ENST00000502761:exon4:c.G419A:p.G140E,ENSG00000136436:ENST00000508679:exon4:c.G203A:p.G68E,ENSG00000136436:ENST00000258947:exon5:c.G419A:p.G140E,ENSG00000136436:ENST00000509415:exon5:c.G335A:p.G112E,ENSG00000136436:ENST00000513119:exon5:c.G203A:p.G68E,ENSG00000136436:ENST00000448105:exon6:c.G491A:p.G164E,ENSG00000136436:ENST00000505071:exon6:c.G446A:p.G149E,ENSG00000136436:ENST00000509507:exon6:c.G482A:p.G161E	Score=428;Name=lod=73	NA	17q21.32	NA	NA	NA	NA	rs550510	0.27	0.27	0.255	0.243211	0.173	0.6538	0.219	0.025	0.2045	0.18	0.66	0.17	0.03	0.1934	0.66	1	T	0.133	B	0.19	B	0.004	N	0.000	P	1.095	L	3.04	T	-0.932	T	0.000	T	0.297	1.944	12.46	2.83	0.383	0.728	6.391	1.94442	1.94442	0.72	0.141047	0.035633	ID=COSM148292;OCCURENCE=1(stomach)	0.217	NA	8.8258864
769	5	147480955	147480955	A	G	exonic	SPINK5	NA	nonsynonymous SNV	SPINK5:NM_001127698:exon14:c.A1258G:p.K420E,SPINK5:NM_001127699:exon14:c.A1258G:p.K420E,SPINK5:NM_006846:exon14:c.A1258G:p.K420E	exonic	ENSG00000133710	NA	nonsynonymous SNV	ENSG00000133710:ENST00000256084:exon14:c.A1258G:p.K420E,ENSG00000133710:ENST00000359874:exon14:c.A1258G:p.K420E,ENSG00000133710:ENST00000398454:exon14:c.A1258G:p.K420E,ENSG00000133710:ENST00000508733:exon14:c.A1201G:p.K401E	Score=435;Name=lod=78	NA	5q32	NA	NA	NA	NA	rs2303067	0.43	0.43	0.386	0.433107	0.4871	0.4851	0.6167	0.1989	0.5102	0.46	0.46	0.59	0.23	0.5079	0.59	1	T	0.0	B	0.003	B	0.838	N	1.000	P	-1.59	N	3.8	T	-0.952	T	0.000	T	0.233	-1.086	0.156	2.84	0.538	0.153	4.719	-1.086008	NA	1	0.513309	0.255538	NA	0.362	CLINSIG=other|other|other;CLNDBN=Atopy\x2c_susceptibility_to|Dermatitis\x2c_atopic\x2c_6\x2c_susceptibility_to|Asthma\x2c_susceptibility_to;CLNREVSTAT=single|single|single;CLNACC=RCV000005585.1|RCV000005586.1|RCV000005587.1;CLNDSDB=MedGen|.|MedGen:OMIM;CLNDSDBID=C1840254|.|C1869116:600807	8.8250244
770	12	55794976	55794976	A	G	exonic	OR6C65	NA	nonsynonymous SNV	OR6C65:NM_001005518:exon1:c.A664G:p.T222A	exonic	ENSG00000205328	NA	nonsynonymous SNV	ENSG00000205328:ENST00000379665:exon1:c.A664G:p.T222A	NA	NA	12q13.2	NA	NA	NA	NA	rs7971073	0.78	0.78	0.743	0.780551	0.841	0.9266	0.8746	0.4879	0.8967	0.84	0.91	0.87	0.48	0.8343	0.91	0.04	D	0.623	P	0.595	P	0.125	N	1.000	P	1.425	L	8.91	T	-0.971	T	0.000	T	0.023	2.258	13.51	3.71	1.688	0.741	4.443	2.258051	2.258051	0.03	0.83407	0.543123	NA	0.681	NA	8.8239634
770	16	1544301	1544301	G	C	exonic	TELO2	NA	nonsynonymous SNV	TELO2:NM_016111:exon2:c.G19C:p.E7Q	exonic	ENSG00000100726	NA	nonsynonymous SNV	ENSG00000100726:ENST00000262319:exon2:c.G19C:p.E7Q,ENSG00000100726:ENST00000497339:exon2:c.G19C:p.E7Q	NA	NA	16p13.3	NA	Name=ZNF263	NA	NA	rs2667660	0.26	0.26	0.071	0.287939	0.2416	0.5119	0.196	0.2352	0.2413	0.21	0.48	0.17	0.17	0.2522	0.48	0.54	T	0.002	B	0.001	B	0.741	N	1.000	P	0	N	2.47	T	-0.908	T	0.000	T	0.054	0.531	6.874	0.132	0.066	1.489	1.871	0.530569	NA	0.11	0.015581	0.017735	NA	NA	NA	8.8239524
770	22	50944163	50944163	G	A	exonic	LMF2	NA	synonymous SNV	LMF2:NM_033200:exon6:c.C856T:p.L286L	exonic	ENSG00000100258	NA	synonymous SNV	ENSG00000100258:ENST00000216080:exon6:c.C781T:p.L261L,ENSG00000100258:ENST00000380796:exon6:c.C856T:p.L286L,ENSG00000100258:ENST00000474879:exon6:c.C856T:p.L286L	Score=340;Name=lod=32	NA	22q13.33	NA	NA	NA	NA	rs128941	0.59	0.59	0.561	0.555511	0.6342	0.7361	0.6513	0.3124	0.5491	0.62	0.77	0.63	0.3	0.6071	0.77	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.010	T	0.000	T	.	-0.78	0.73	3.77	1.139	8.738	9.501	-0.780313	NA	NA	0.601628	0.371085	NA	0.609	NA	8.8237386
770	6	90315789	90315789	A	G	exonic	ANKRD6	NA	nonsynonymous SNV	ANKRD6:NM_001242809:exon5:c.A382G:p.I128V,ANKRD6:NM_001242811:exon5:c.A382G:p.I128V,ANKRD6:NM_001242813:exon5:c.A382G:p.I128V,ANKRD6:NM_014942:exon5:c.A382G:p.I128V	exonic	ENSG00000135299	NA	nonsynonymous SNV	ENSG00000135299:ENST00000339746:exon5:c.A382G:p.I128V,ENSG00000135299:ENST00000369408:exon5:c.A382G:p.I128V,ENSG00000135299:ENST00000447838:exon5:c.A382G:p.I128V,ENSG00000135299:ENST00000485637:exon5:c.A382G:p.I128V,ENSG00000135299:ENST00000522441:exon5:c.A382G:p.I128V,ENSG00000135299:ENST00000465722:exon6:c.A382G:p.I128V	Score=600;Name=lod=367	NA	6q15	NA	NA	Name=2	NA	rs3748085	0.84	0.84	0.839	0.781749	0.831	0.9077	0.866	0.6831	0.6748	0.85	0.93	0.88	0.69	0.8356	0.93	0.96	T	0.0	B	0.0	B	0.006	N	0.000	P	0.54	N	-0.31	T	-1.079	T	0.055	T	0.137	0.284	5.538	4.07	0.470	3.910	10.218	0.284214	NA	1	0.843266	0.716853	NA	0.746	NA	8.8234674
770	12	15035919	15035919	T	C	exonic	MGP	NA	nonsynonymous SNV	MGP:NM_000900:exon3:c.A157G:p.K53E,MGP:NM_001190839:exon4:c.A232G:p.K78E	exonic	ENSG00000111341	NA	nonsynonymous SNV	ENSG00000111341:ENST00000539261:exon3:c.A157G:p.K53E,ENSG00000111341:ENST00000228938:exon4:c.A232G:p.K78E	NA	NA	12p12.3	NA	NA	NA	NA	rs1801716	0.0023	0.0023	0.003	0.00399361	0.003	NA	0.0043	NA	0.0143	0.004	NA	0.01	NA	0.0051	0.01	0.28	T	0.454	P	0.026	B	0.556	N	1.000	N	1.245	L	1.52	T	-1.047	T	0.031	T	0.449	1.369	10.5	1.86	0.166	1.799	4.413	1.368978	1.368978	0.55	0.004884	0.000908	NA	NA	NA	8.8203494
770	1	152282267	152282267	G	A	exonic	FLG	NA	nonsynonymous SNV	FLG:NM_002016:exon3:c.C5095T:p.R1699C	exonic	ENSG00000143631	NA	nonsynonymous SNV	ENSG00000143631:ENST00000368799:exon3:c.C5095T:p.R1699C	NA	NA	1q21.3	NA	NA	NA	NA	rs12405278	0.26	0.26	0.211	0.28774	0.1421	0.5843	0.3905	0.0121	0.4315	0.15	0.59	0.33	0.02	0.2288	0.59	0.06	T	0.999	D	0.912	D	.	.	1.000	P	1.7	L	3.66	T	-1.024	T	0.015	T	0.053	-0.186	3.096	1.76	0.482	0.137	7.611	-0.185843	NA	0	0.144186	0.036541	NA	0.174	NA	8.8182474
770	1	228505739	228505739	G	A	exonic	OBSCN	NA	nonsynonymous SNV	OBSCN:NM_001098623:exon53:c.G13996A:p.G4666S,OBSCN:NM_052843:exon53:c.G13996A:p.G4666S,OBSCN:NM_001271223:exon64:c.G16867A:p.G5623S	exonic	ENSG00000154358	NA	nonsynonymous SNV	ENSG00000154358:ENST00000284548:exon53:c.G13996A:p.G4666S,ENSG00000154358:ENST00000366709:exon53:c.G5353A:p.G1785S,ENSG00000154358:ENST00000422127:exon53:c.G13996A:p.G4666S,ENSG00000154358:ENST00000366707:exon59:c.G6898A:p.G2300S,ENSG00000154358:ENST00000570156:exon64:c.G16867A:p.G5623S	NA	NA	1q42.13	NA	NA	NA	NA	rs3795801	0.18	0.18	0.152	0.173123	0.159	0.1518	0.2435	0.2216	0.0941	0.16	0.15	0.25	0.19	0.1843	0.25	0.84	T	0.002	B	0.004	B	0.795	N	1.000	P	0.525	N	-0.06	T	-0.951	T	0.000	T	0.042	2.236	13.43	-5.37	-1.559	0.239	20.253	2.235989	2.235989	0.26	0.173477	0.23909	NA	0.188	NA	8.8165564
771	11	5602438	5602438	T	A	exonic	OR52B6	NA	nonsynonymous SNV	OR52B6:NM_001005162:exon1:c.T332A:p.L111H	exonic	ENSG00000187747	NA	nonsynonymous SNV	ENSG00000187747:ENST00000345043:exon1:c.T332A:p.L111H	NA	NA	11p15.4	NA	Name=CEBPB,PU.1,TAL1_(SC-12984)	Name=2	NA	rs2341432	0.68	0.68	0.684	0.715056	0.4761	0.9802	0.67	0.7352	0.6922	0.47	0.97	0.63	0.71	0.5745	0.97	0.15	T	0.0	B	0.0	B	0.537	N	1.000	P	0.03	N	6.64	T	-0.967	T	0.000	T	0.072	-0.045	3.783	2.71	0.400	0.473	5.909	-0.045281	NA	0.35	0.468335	0.697632	NA	0.616	NA	8.8143984
771	1	176863867	176863867	T	C	exonic	ASTN1	NA	nonsynonymous SNV	ASTN1:NM_004319:exon17:c.A2771G:p.H924R,ASTN1:NM_207108:exon17:c.A2771G:p.H924R	exonic	ENSG00000152092	NA	nonsynonymous SNV	ENSG00000152092:ENST00000361833:exon17:c.A2771G:p.H924R,ENSG00000152092:ENST00000367654:exon17:c.A2795G:p.H932R,ENSG00000152092:ENST00000367657:exon17:c.A2771G:p.H924R,ENSG00000152092:ENST00000424564:exon17:c.A2771G:p.H924R	Score=512;Name=lod=160	NA	1q25.2	NA	NA	NA	NA	rs2228956	0.83	0.83	0.821	0.828874	0.8588	0.8006	0.7233	0.8593	0.8609	0.85	0.81	0.78	0.86	0.8268	0.87	1	T	0.0	B	0.0	B	0.000	N	0.998	P	-0.805	N	1.65	T	-0.971	T	0.000	T	0.124	0.97	8.958	5.26	1.387	5.347	14.087	0.969826	NA	1	0.833605	0.874035	NA	0.877	NA	8.8141284
771	17	7386279	7386279	T	C	exonic	SLC35G6	NA	nonsynonymous SNV	SLC35G6:NM_001102614:exon2:c.T976C:p.W326R	exonic	ENSG00000259224	NA	nonsynonymous SNV	ENSG00000259224:ENST00000412468:exon2:c.T976C:p.W326R	Score=425;Name=lod=71	NA	17p13.1	NA	NA	NA	NA	rs7219992	0.58	0.58	0.678	0.747204	0.7734	0.9187	0.8718	0.5726	0.6912	0.57	0.7	0.69	0.4	0.7466	0.7	0.43	T	0.0	B	0.0	B	.	.	0.000	P	0	N	-0.24	T	-0.937	T	0.000	T	0.066	0.03	4.169	3.72	0.538	1.015	7.459	0.029957	NA	0.31	NA	NA	NA	NA	NA	8.8133334
771	3	186395572	186395572	A	T	exonic	HRG	NA	nonsynonymous SNV	HRG:NM_000412:exon7:c.A1478T:p.N493I	exonic	ENSG00000113905	NA	nonsynonymous SNV	ENSG00000113905:ENST00000232003:exon7:c.A1478T:p.N493I	Score=397;Name=lod=55	NA	3q27.3	NA	NA	NA	NA	rs1042464	0.64	0.64	0.631	0.650559	0.4831	0.8145	0.5879	0.711	0.6166	0.48	0.78	0.62	0.72	0.552	0.78	1	T	0.0	B	0.0	B	0.006	N	1.000	P	-2.3	N	3.46	T	-1.002	T	0.000	T	0.033	-1.358	0.028	4.57	0.724	1.915	7.778	-1.358397	NA	1	0.485	0.682251	NA	0.638	NA	8.8132334
771	5	147475386	147475386	A	G	exonic	SPINK5	NA	nonsynonymous SNV	SPINK5:NM_001127698:exon10:c.A800G:p.Q267R,SPINK5:NM_001127699:exon10:c.A800G:p.Q267R,SPINK5:NM_006846:exon10:c.A800G:p.Q267R	exonic	ENSG00000133710	NA	nonsynonymous SNV	ENSG00000133710:ENST00000256084:exon10:c.A800G:p.Q267R,ENSG00000133710:ENST00000359874:exon10:c.A800G:p.Q267R,ENSG00000133710:ENST00000398454:exon10:c.A800G:p.Q267R,ENSG00000133710:ENST00000508733:exon10:c.A743G:p.Q248R	NA	NA	5q32	NA	NA	NA	NA	rs6892205	0.49	0.49	0.452	0.508986	0.4911	0.4812	0.6513	0.4682	0.5102	0.46	0.46	0.62	0.48	0.5213	0.62	0.68	T	0.0	B	0.001	B	0.242	N	1.000	P	-0.35	N	3.74	T	-0.968	T	0.000	T	0.069	-2.903	0.001	-7.64	-2.626	-4.017	16.378	-2.903181	NA	1	0.508116	0.460497	NA	0.428	NA	8.8128174
771	4	155219662	155219662	G	C	exonic	DCHS2	NA	nonsynonymous SNV	DCHS2:NM_017639:exon18:c.C4439G:p.T1480R	exonic	ENSG00000197410	NA	nonsynonymous SNV	ENSG00000197410:ENST00000357232:exon18:c.C4439G:p.T1480R	NA	NA	4q31.3	NA	NA	NA	NA	rs17031394	0.15	0.15	0.14	0.171925	0.173	0.1528	0.1138	0.1679	0.2372	0.16	0.13	0.15	0.15	0.1723	0.18	0.74	T	0.001	B	0.0	B	0.086	N	1.000	P	-0.24	N	2.14	T	-1.038	T	0.000	T	0.083	-0.336	2.409	-10.2	-1.726	-1.181	3.735	-0.335762	NA	0.87	0.176628	0.182478	NA	0.13	NA	8.8114054
771	22	18165995	18165995	T	G	exonic	BCL2L13	NA	nonsynonymous SNV	BCL2L13:NM_001270726:exon2:c.T209G:p.I70R,BCL2L13:NM_001270727:exon2:c.T209G:p.I70R,BCL2L13:NM_001270732:exon3:c.T137G:p.I46R,BCL2L13:NM_001270734:exon3:c.T137G:p.I46R,BCL2L13:NM_001270735:exon3:c.T137G:p.I46R,BCL2L13:NM_015367:exon3:c.T137G:p.I46R	exonic	ENSG00000099968	NA	nonsynonymous SNV	ENSG00000099968:ENST00000418951:exon2:c.T137G:p.I46R,ENSG00000099968:ENST00000317582:exon3:c.T137G:p.I46R,ENSG00000099968:ENST00000355028:exon3:c.T137G:p.I46R,ENSG00000099968:ENST00000493680:exon3:c.T137G:p.I46R,ENSG00000099968:ENST00000498133:exon3:c.T137G:p.I46R,ENSG00000099968:ENST00000399782:exon4:c.T137G:p.I46R	NA	NA	22q11.21	NA	NA	NA	NA	rs2587070	0.09	0.09	0.075	0.0710863	0.173	0.004	0.1326	0.0204	0.0603	0.19	0.0035	0.14	0.03	0.1509	0.2	0.36	T	0.148	B	0.053	B	0.083	N	1.000	P	0	N	3.71	T	-0.924	T	0.000	T	0.11	-0.482	1.782	-2.15	-0.403	-2.225	7.667	-0.481591	NA	0.29	0.202212	0.055404	NA	0.13	NA	8.8072214
771	22	42537628	42537628	T	C	ncRNA_exonic	CYP2D7P1	NA	NA	NA	exonic	ENSG00000205702	NA	unknown	UNKNOWN	Score=304;Name=lod=23	NA	22q13.2	NA	NA	NA	NA	rs150786922	0.01	0.01	0.006	0.0111821	0.008	NA	0.0101	0.0189	0.0164	0.01	NA	0.01	0.02	0.0187	0.02	1	T	0.0	B	0.001	B	0.000	N	1.000	D	.	.	.	.	-1.061	T	0.032	T	.	-0.203	3.017	3.59	0.857	0.059	7.355	-0.202716	NA	1	NA	NA	NA	NA	NA	8.8066333
771	6	30862423	30862423	C	T	exonic	DDR1	NA	nonsynonymous SNV	DDR1:NM_001202522:exon10:c.C1406T:p.P469L	exonic	ENSG00000204580	NA	nonsynonymous SNV	ENSG00000204580:ENST00000361741:exon6:c.C599T:p.P200L,ENSG00000204580:ENST00000417521:exon6:c.C794T:p.P265L	Score=618;Name=lod=435	NA	6p21.33	NA	NA	NA	NA	rs1264319	0.16	0.16	0.17	0.128195	0.162	0.0585	0.0951	0.177	0.1227	0.17	0.07	0.12	0.26	0.1676	0.26	0.43	T	0.0	B	0.0	B	.	.	0.000	P	.	.	-1.19	T	-1.073	T	0.064	T	.	0.752	7.986	2.73	0.837	0.405	7.481	0.752226	NA	0.24	0.197558	0.194734	NA	0.174	NA	8.8061754
772	7	897496	897496	G	A	exonic	SUN1	NA	nonsynonymous SNV	SUN1:NM_001171944:exon11:c.G1117A:p.E373K,SUN1:NM_025154:exon12:c.G1177A:p.E393K,SUN1:NM_001130965:exon13:c.G1426A:p.E476K	exonic	ENSG00000164828	NA	nonsynonymous SNV	ENSG00000164828:ENST00000413514:exon9:c.G820A:p.E274K,ENSG00000164828:ENST00000429178:exon11:c.G1201A:p.E401K,ENSG00000164828:ENST00000452783:exon11:c.G1117A:p.E373K,ENSG00000164828:ENST00000389574:exon12:c.G1177A:p.E393K,ENSG00000164828:ENST00000425407:exon12:c.G1177A:p.E393K,ENSG00000164828:ENST00000401592:exon13:c.G1426A:p.E476K,ENSG00000164828:ENST00000405266:exon14:c.G1537A:p.E513K,ENSG00000164828:ENST00000456758:exon19:c.G1993A:p.E665K	NA	NA	7p22.3	NA	NA	Name=8	NA	rs59910530	0.16	0.16	0.123	0.168331	0.1849	0.1359	0.2406	0.0772	0.2566	0.18	0.16	0.24	0.1	0.1817	0.24	0.91	T	0.021	B	0.004	B	0.820	N	1.000	P	0	N	2.32	T	-1.022	T	0.000	T	0.241	0.933	8.8	-10.3	-2.067	-0.212	9.034	0.932697	NA	0.16	0.161999	0.084648	NA	0.13	NA	8.8047344
772	8	27324822	27324822	T	C	exonic	CHRNA2	NA	nonsynonymous SNV	CHRNA2:NM_000742:exon5:c.A373G:p.T125A	exonic	ENSG00000120903	NA	nonsynonymous SNV	ENSG00000120903:ENST00000520933:exon4:c.A373G:p.T125A,ENSG00000120903:ENST00000240132:exon5:c.A328G:p.T110A,ENSG00000120903:ENST00000407991:exon5:c.A373G:p.T125A,ENSG00000120903:ENST00000523695:exon5:c.A373G:p.T125A	NA	NA	8p21.2	NA	NA	NA	NA	rs891398	0.63	0.63	0.637	0.610224	0.5119	0.6498	0.5562	0.8298	0.4121	0.49	0.69	0.57	0.83	0.5311	0.83	0.77	T	0.0	B	0.0	B	0.002	N	1.000	P	-1.125	N	-1.17	T	-0.957	T	0.000	T	0.062	-1.604	0.014	3.46	1.342	0.603	5.715	-1.604403	NA	0.89	0.487093	0.761689	NA	0.616	CLINSIG=probable-non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000116712.2|RCV000124271.1;CLNDSDB=.|.;CLNDSDBID=.|.	8.8032404
772	9	79320095	79320095	T	G	exonic	PRUNE2	NA	nonsynonymous SNV	PRUNE2:NM_015225:exon8:c.A7095C:p.L2365F	exonic	ENSG00000106772	NA	nonsynonymous SNV	ENSG00000106772:ENST00000376718:exon8:c.A7095C:p.L2365F,ENSG00000106772:ENST00000428286:exon8:c.A6018C:p.L2006F	NA	NA	9q21.2	NA	NA	NA	NA	rs3739524	0.3	0.3	0.3	0.282548	0.173	0.4673	0.1787	0.3495	0.1881	0.18	0.5	0.17	0.38	0.2123	0.5	0.14	T	0.006	B	0.003	B	0.746	N	1.000	P	1.78	L	0.79	T	-0.974	T	0.000	T	0.208	0.45	6.441	-6.03	-1.146	-0.885	4.052	0.449511	NA	0.02	0.146706	0.303571	NA	0.203	NA	8.8013274
772	5	94861118	94861118	G	C	exonic	TTC37	NA	nonsynonymous SNV	TTC37:NM_014639:exon15:c.C1309G:p.L437V	exonic	ENSG00000198677	NA	nonsynonymous SNV	ENSG00000198677:ENST00000514952:exon14:c.C1165G:p.L389V,ENSG00000198677:ENST00000358746:exon15:c.C1309G:p.L437V	NA	NA	5q15	NA	NA	NA	NA	rs17084873	0.21	0.21	0.227	0.241813	0.1779	0.12	0.1772	0.4228	0.2342	0.18	0.13	0.2	0.38	0.1927	0.39	0.17	T	0.003	B	0.006	B	0.212	N	1.000	P	-0.205	N	0.31	T	-1.007	T	0.000	T	0.069	0.655	7.515	3.87	0.727	1.085	5.587	0.655409	NA	0.35	0.163953	0.388283	NA	0.268	NA	8.7987804
772	14	64522674	64522674	G	C	exonic	SYNE2	NA	nonsynonymous SNV	SYNE2:NM_015180:exon49:c.G9757C:p.D3253H,SYNE2:NM_182914:exon49:c.G9757C:p.D3253H	exonic	ENSG00000054654	NA	nonsynonymous SNV	ENSG00000054654:ENST00000344113:exon49:c.G9757C:p.D3253H,ENSG00000054654:ENST00000358025:exon49:c.G9757C:p.D3253H,ENSG00000054654:ENST00000554584:exon49:c.G9856C:p.D3286H	Score=259;Name=lod=15	NA	14q23.2	NA	NA	NA	NA	rs8010911	0.73	0.73	0.699	0.68131	0.8638	0.7778	0.7954	0.3593	0.7485	0.86	0.81	0.79	0.39	0.8076	0.86	0.15	T	0.343	B	0.445	B	0.267	N	0.000	P	0.895	L	1.22	T	-1.079	T	0.000	T	0.145	1.964	12.52	2.85	0.343	2.762	9.566	1.963708	1.963708	0.19	0.863515	0.474466	NA	0.696	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118560.1;CLNDSDB=.;CLNDSDBID=.	8.7984184
772	10	72518009	72518009	A	G	exonic	ADAMTS14	NA	nonsynonymous SNV	ADAMTS14:NM_080722:exon21:c.A3146G:p.E1049G,ADAMTS14:NM_139155:exon21:c.A3155G:p.E1052G	exonic	ENSG00000138316	NA	nonsynonymous SNV	ENSG00000138316:ENST00000373207:exon21:c.A3146G:p.E1049G,ENSG00000138316:ENST00000373208:exon21:c.A3155G:p.E1052G	NA	NA	10q22.1	NA	NA	NA	NA	rs4747096	0.23	0.23	0.212	0.218051	0.1849	0.37	0.2305	0.1694	0.1524	0.19	0.37	0.2	0.17	0.1888	0.37	0.43	T	0.0	B	0.0	B	0.350	N	1.000	P	-0.95	N	0.11	T	-0.949	T	0.000	T	0.027	-0.184	3.106	2.98	0.334	1.663	4.989	-0.183744	NA	0.44	0.161279	0.188379	NA	0.261	NA	8.7983544
772	19	57646570	57646570	T	C	exonic	ZIM3	NA	nonsynonymous SNV	ZIM3:NM_052882:exon5:c.A1135G:p.I379V	exonic	ENSG00000141946	NA	nonsynonymous SNV	ENSG00000141946:ENST00000269834:exon5:c.A1135G:p.I379V	NA	NA	19q13.43	NA	NA	NA	NA	rs4801433	0.4	0.4	0.371	0.422524	0.5149	0.3621	0.4741	0.2678	0.5624	0.5	0.36	0.5	0.24	0.488	0.53	0.16	T	0.978	D	0.952	D	.	.	1.000	P	0.105	N	3.21	T	-0.969	T	0.000	T	0.021	-1.202	0.071	1.68	1.237	-0.574	5.684	-1.202238	NA	0.57	0.532209	0.310486	NA	0.283	NA	8.7982244
772	11	48286231	48286231	T	A	exonic	OR4X1	NA	stopgain	OR4X1:NM_001004726:exon1:c.T819A:p.Y273X	exonic	ENSG00000176567	NA	stopgain	ENSG00000176567:ENST00000320048:exon1:c.T819A:p.Y273X	Score=363;Name=lod=40	NA	11p11.2	Score=898;Name=V$TATA_01	NA	NA	NA	rs10838851	0.66	0.66	0.638	0.604233	0.7445	0.5476	0.7406	0.5461	0.5	0.75	0.6	0.74	0.53	0.7037	0.75	1	T	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	0.525	6.843	2.38	0.536	-0.199	5.848	0.524683	NA	0	0.754537	0.565879	NA	0.616	NA	8.797263
773	14	20296004	20296004	C	T	exonic	OR4N2	NA	nonsynonymous SNV	OR4N2:NM_001004723:exon1:c.C397T:p.P133S	exonic	ENSG00000176294	NA	nonsynonymous SNV	ENSG00000176294:ENST00000315947:exon1:c.C397T:p.P133S,ENSG00000176294:ENST00000568211:exon1:c.C397T:p.P133S,ENSG00000176294:ENST00000557677:exon2:c.C397T:p.P133S	NA	NA	14q11.2	NA	Name=CTCF	NA	NA	rs2318279	0.26	0.26	0.253	NA	NA	NA	NA	NA	NA	0.27	0.12	0.21	0.44	0.2822	0.44	0.16	T	0.0	B	0.0	B	0.017	N	1.000	P	0.66	N	5.46	T	-0.950	T	0.000	T	0.246	-1.056	0.188	-1.58	-0.283	-1.373	2.051	-1.055704	NA	0.67	0.256395	0.375851	ID=COSM147728;OCCURENCE=1(stomach)	0.333	NA	8.7947384
773	3	186917751	186917751	C	G	exonic	RTP1	NA	nonsynonymous SNV	RTP1:NM_153708:exon2:c.C685G:p.Q229E	exonic	ENSG00000175077	NA	nonsynonymous SNV	ENSG00000175077:ENST00000312295:exon2:c.C685G:p.Q229E	NA	NA	3q27.3	NA	NA	NA	NA	rs6764714	0.43	0.43	0.416	0.427516	0.5437	0.2837	0.4683	0.3971	0.4683	0.54	0.26	0.48	0.41	0.4759	0.54	1	T	0.0	B	0.0	B	0.003	N	1.000	P	0.55	N	1.62	T	-0.976	T	0.000	T	0.056	0.558	7.016	5.74	1.456	1.717	12.993	0.55777	NA	1	0.523721	0.403768	NA	0.471	NA	8.7900124
773	22	51064039	51064039	G	C	exonic	ARSA	NA	nonsynonymous SNV	ARSA:NM_000487:exon7:c.C1178G:p.T393S,ARSA:NM_001085428:exon7:c.C920G:p.T307S,ARSA:NM_001085425:exon8:c.C1178G:p.T393S,ARSA:NM_001085426:exon8:c.C1178G:p.T393S,ARSA:NM_001085427:exon8:c.C1178G:p.T393S	exonic	ENSG00000100299	NA	nonsynonymous SNV	ENSG00000100299:ENST00000216124:exon7:c.C1178G:p.T393S,ENSG00000100299:ENST00000453344:exon7:c.C920G:p.T307S,ENSG00000100299:ENST00000547307:exon7:c.C1172G:p.T391S,ENSG00000100299:ENST00000356098:exon8:c.C1178G:p.T393S,ENSG00000100299:ENST00000395619:exon8:c.C1178G:p.T393S,ENSG00000100299:ENST00000395621:exon8:c.C1178G:p.T393S,ENSG00000100299:ENST00000547805:exon8:c.C1172G:p.T391S	NA	NA	22q13.33	Score=794;Name=V$COMP1_01	NA	NA	NA	rs743616	0.43	0.43	0.436	0.405551	0.5288	0.3214	0.4697	0.3578	0.3845	0.51	0.32	0.49	0.37	0.4843	0.53	0.42	T	0.0	B	0.0	B	0.650	N	1.000	P	-0.42	N	-2.52	D	-1.017	T	0.000	T	0.235	0.814	8.274	-0.029	0.053	0.103	1.589	0.813939	NA	0.43	0.530233	0.394008	NA	0.594	CLINSIG=pathogenic|non-pathogenic;CLNDBN=Metachromatic_leukodystrophy|not_specified;CLNREVSTAT=single|single;CLNACC=RCV000020311.1|RCV000078937.1;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet:SNOMED_CT|.;CLNDSDBID=NBK1130:C0023522:250100:ORPHA512:396338004|.	8.7900004
773	1	3421897	3421897	A	G	exonic	MEGF6	NA	nonsynonymous SNV	MEGF6:NM_001409:exon17:c.T2063C:p.L688P	exonic	ENSG00000162591	NA	nonsynonymous SNV	ENSG00000162591:ENST00000294599:exon14:c.T1748C:p.L583P,ENSG00000162591:ENST00000356575:exon17:c.T2063C:p.L688P,ENSG00000162591:ENST00000485002:exon17:c.T2084C:p.L695P	NA	NA	1p36.32	NA	NA	NA	NA	rs2821008	0.23	0.23	0.205	0.259185	0.1799	0.2331	0.2277	0.4251	0.1656	0.17	0.2	0.23	0.36	0.1998	0.36	0.35	T	0.0	B	0.0	B	0.237	N	1.000	P	-1.6	N	2.57	T	-0.927	T	0.000	T	0.393	-2.35	0.004	2.53	0.094	1.318	8.044	-2.349863	NA	0.48	0.165112	0.343704	NA	0.319	NA	8.7885214
773	19	5778517	5778517	A	T	exonic	CATSPERD	NA	nonsynonymous SNV	CATSPERD:NM_152784:exon22:c.A2227T:p.T743S	exonic	ENSG00000174898	NA	nonsynonymous SNV	ENSG00000174898:ENST00000381624:exon22:c.A2227T:p.T743S	NA	NA	19p13.3	NA	NA	NA	NA	rs2305925	0.28	0.28	0.229	0.294129	0.165	0.5506	0.1859	0.2587	0.2873	0.17	0.5	0.2	0.25	0.2254	0.5	0.05	D	0.266	B	0.091	B	0.481	N	1.000	P	0.69	N	1.93	T	-0.926	T	0.000	T	0.033	1.555	11.15	-0.099	-0.200	-1.367	4.238	1.554602	1.554602	0.02	0.154604	0.235776	NA	0.239	NA	8.7883294
773	20	18794754	18794754	C	T	exonic	SCP2D1	NA	nonsynonymous SNV	SCP2D1:NM_178483:exon1:c.C295T:p.P99S	exonic	ENSG00000132631	NA	nonsynonymous SNV	ENSG00000132631:ENST00000377428:exon1:c.C295T:p.P99S	NA	NA	20p11.23	NA	NA	NA	NA	rs1053839	0.2	0.2	0.208	0.227436	0.1839	0.0417	0.196	0.4266	0.2168	0.18	0.07	0.19	0.39	0.1883	0.39	0.43	T	0.011	B	0.034	B	0.158	N	1.000	P	0.185	N	2.05	T	-0.912	T	0.000	T	0.032	-0.005	3.991	-3.53	-0.999	0.042	6.567	-0.004557	NA	0.32	0.174419	0.377667	NA	0.283	NA	8.7867144
774	2	241463639	241463639	C	T	exonic	ANKMY1	NA	nonsynonymous SNV	ANKMY1:NM_017844:exon6:c.G805A:p.E269K,ANKMY1:NM_016552:exon7:c.G1228A:p.E410K	exonic	ENSG00000144504	NA	nonsynonymous SNV	ENSG00000144504:ENST00000405002:exon5:c.G538A:p.E180K,ENSG00000144504:ENST00000536462:exon5:c.G664A:p.E222K,ENSG00000144504:ENST00000361678:exon6:c.G805A:p.E269K,ENSG00000144504:ENST00000373318:exon6:c.G805A:p.E269K,ENSG00000144504:ENST00000373320:exon6:c.G538A:p.E180K,ENSG00000144504:ENST00000403283:exon6:c.G1042A:p.E348K,ENSG00000144504:ENST00000405523:exon6:c.G805A:p.E269K,ENSG00000144504:ENST00000272972:exon7:c.G1228A:p.E410K,ENSG00000144504:ENST00000391987:exon8:c.G1228A:p.E410K,ENSG00000144504:ENST00000401804:exon8:c.G1495A:p.E499K	NA	NA	2q37.3	NA	NA	NA	NA	rs3796119	0.01	0.01	0.01	0.0309505	0.0129	0.0109	0.0086	NA	0.1278	0.01	0.01	0.01	NA	0.0228	0.022	0.21	T	0.988	D	0.649	P	0.712	U	1.000	N	0.345	N	4.12	T	-1.038	T	0.087	T	0.194	1.702	11.65	0.356	0.071	0.616	2.765	1.702216	1.702216	0.13	0.012674	0.003177	NA	0.014	NA	8.7849594
774	3	184103903	184103903	A	C	exonic	CHRD	NA	nonsynonymous SNV	CHRD:NM_003741:exon15:c.A1888C:p.M630L	exonic	ENSG00000090539	NA	nonsynonymous SNV	ENSG00000090539:ENST00000545352:exon7:c.A778C:p.M260L,ENSG00000090539:ENST00000348986:exon14:c.A1768C:p.M590L,ENSG00000090539:ENST00000204604:exon15:c.A1888C:p.M630L,ENSG00000090539:ENST00000450923:exon15:c.A1888C:p.M630L	Score=452;Name=lod=92	NA	3q27.1	NA	NA	NA	NA	rs16858780	0.28	0.28	0.27	0.286542	0.1511	0.3075	0.4121	0.3366	0.2474	0.15	0.35	0.36	0.35	0.2252	0.36	1	T	0.0	B	0.001	B	0.000	N	0.000	P	-1.24	N	1.0	T	-0.949	T	0.000	T	0.031	-1.208	0.068	1.11	0.128	1.032	5.617	-1.208173	NA	1	0.172791	0.316841	NA	0.196	NA	8.7842424
774	22	41613188	41613188	C	T	exonic	L3MBTL2	NA	synonymous SNV	L3MBTL2:NM_031488:exon5:c.C582T:p.P194P	exonic	ENSG00000100395	NA	synonymous SNV	ENSG00000100395:ENST00000450939:exon4:c.C558T:p.P186P,ENSG00000100395:ENST00000216237:exon5:c.C582T:p.P194P,ENSG00000100395:ENST00000452106:exon5:c.C582T:p.P194P	Score=616;Name=lod=425	NA	22q13.2	NA	NA	Name=22	NA	rs9611519	0.23	0.23	0.173	0.240615	0.3072	0.0526	0.4625	0.1112	0.3834	0.31	0.06	0.48	0.11	0.298	0.48	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.910	T	0.000	T	.	2.319	13.71	0.282	0.149	-1.167	3.765	2.319041	2.319041	NA	0.278837	0.127553	ID=COSM149302;OCCURENCE=1(stomach)	0.29	NA	8.7826296
774	12	81769581	81769581	C	T	exonic	PPFIA2	NA	synonymous SNV	PPFIA2:NM_001220478:exon6:c.G828A:p.L276L,PPFIA2:NM_001220477:exon7:c.G903A:p.L301L,PPFIA2:NM_001220474:exon8:c.G1071A:p.L357L,PPFIA2:NM_001220473:exon9:c.G1125A:p.L375L,PPFIA2:NM_001220475:exon9:c.G1125A:p.L375L,PPFIA2:NM_001220476:exon9:c.G1125A:p.L375L,PPFIA2:NM_003625:exon10:c.G1125A:p.L375L	exonic	ENSG00000139220	NA	synonymous SNV	ENSG00000139220:ENST00000443686:exon6:c.G828A:p.L276L,ENSG00000139220:ENST00000333447:exon7:c.G1071A:p.L357L,ENSG00000139220:ENST00000407050:exon7:c.G903A:p.L301L,ENSG00000139220:ENST00000550359:exon7:c.G666A:p.L222L,ENSG00000139220:ENST00000549325:exon8:c.G1071A:p.L357L,ENSG00000139220:ENST00000548586:exon9:c.G1125A:p.L375L,ENSG00000139220:ENST00000550584:exon9:c.G1125A:p.L375L,ENSG00000139220:ENST00000552948:exon9:c.G1125A:p.L375L,ENSG00000139220:ENST00000549396:exon10:c.G1125A:p.L375L	Score=669;Name=lod=699	NA	12q21.31	NA	NA	NA	NA	rs10862301	0.44	0.44	0.446	0.445687	0.2724	0.5387	0.402	0.5673	0.3947	0.27	0.56	0.38	0.58	0.3612	0.58	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.930	T	0.000	T	.	0.459	6.49	-5.72	-1.195	-0.501	3.747	0.458611	NA	NA	0.250853	0.468635	NA	0.435	NA	8.7822136
774	7	43483981	43483981	G	C	exonic	HECW1	NA	nonsynonymous SNV	HECW1:NM_015052:exon11:c.G1210C:p.G404R	exonic	ENSG00000002746	NA	nonsynonymous SNV	ENSG00000002746:ENST00000453890:exon10:c.G1210C:p.G404R,ENSG00000002746:ENST00000395891:exon11:c.G1210C:p.G404R	NA	NA	7p13	NA	NA	NA	NA	rs61756574	0.1	0.1	0.077	0.0932508	0.1909	0.0089	0.1081	0.0091	0.183	0.2	0.01	0.14	0.01	0.1685	0.2	0.17	T	0.09	B	0.029	B	0.000	N	1.000	P	0.895	L	1.55	T	-1.050	T	0.000	T	0.124	1.964	12.52	-3.65	-1.119	-0.043	4.083	1.96365	1.96365	0.05	0.194109	0.032567	NA	0.109	NA	8.7798244
774	7	72418963	72418963	T	C	exonic	POM121	NA	nonsynonymous SNV	POM121:NM_001257190:exon16:c.T2954C:p.L985P	exonic	ENSG00000196313	NA	nonsynonymous SNV	ENSG00000196313:ENST00000446813:exon15:c.T2954C:p.L985P,ENSG00000196313:ENST00000395270:exon16:c.T2954C:p.L985P	NA	NA	7q11.23	NA	NA	NA	NA	rs1107	0.45	0.45	0.393	0.573083	0.5408	0.4663	0.5403	0.6823	0.592	0.44	0.39	0.54	0.48	0.5402	0.6	0.03	D	0.0	B	0.0	B	.	.	1.000	P	.	.	3.17	T	-0.974	T	0.000	T	0.072	0.147	4.789	-0.506	-1.656	-1.592	4.774	0.146766	NA	0.02	0.472998	0.604641	NA	0.37	NA	8.7793354
774	5	73076511	73076511	C	A	exonic	ARHGEF28	NA	nonsynonymous SNV	ARHGEF28:NM_001080479:exon7:c.C851A:p.P284Q,ARHGEF28:NM_001177693:exon7:c.C851A:p.P284Q	exonic	ENSG00000214944	NA	nonsynonymous SNV	ENSG00000214944:ENST00000426542:exon6:c.C851A:p.P284Q,ENSG00000214944:ENST00000437974:exon6:c.C851A:p.P284Q,ENSG00000214944:ENST00000287898:exon7:c.C851A:p.P284Q,ENSG00000214944:ENST00000296794:exon7:c.C851A:p.P284Q,ENSG00000214944:ENST00000513042:exon7:c.C851A:p.P284Q,ENSG00000214944:ENST00000545377:exon7:c.C851A:p.P284Q	NA	NA	5q13.2	NA	Name=CTCF	Name=22	NA	rs6453022	0.56	0.56	0.553	0.577875	0.499	0.5129	0.5303	0.7269	0.5583	0.5	0.49	0.52	0.74	0.548	0.74	0.64	T	0.0	B	0.0	B	.	.	1.000	P	-0.755	N	3.32	T	-1.039	T	0.000	T	0.091	-2.361	0.004	-0.022	-0.450	1.843	0.974	-2.360585	NA	1	0.50741	0.702548	NA	0.514	NA	8.7789234
774	19	56549510	56549510	T	C	exonic	NLRP5	NA	nonsynonymous SNV	NLRP5:NM_153447:exon10:c.T2735C:p.M912T	exonic	ENSG00000171487	NA	nonsynonymous SNV	ENSG00000171487:ENST00000390649:exon10:c.T2735C:p.M912T	NA	NA	19q13.43	NA	NA	NA	NA	rs16986899	0.27	0.27	0.28	0.264976	0.1889	0.3006	0.1398	0.4486	0.1472	0.18	0.31	0.16	0.42	0.1994	0.42	0.22	T	0.0	B	0.0	B	0.822	N	1.000	P	-0.6	N	0.69	T	-0.955	T	0.000	T	0.013	-0.787	0.711	-3.09	-1.137	-0.013	2.295	-0.787261	NA	0.35	0.166548	0.385511	ID=COSM148766;OCCURENCE=1(stomach)	0.304	NA	8.7784854
774	4	38774889	38774889	T	C	exonic	TLR10	NA	nonsynonymous SNV	TLR10:NM_001017388:exon2:c.A2323G:p.I775V,TLR10:NM_001195106:exon3:c.A2323G:p.I775V,TLR10:NM_001195107:exon3:c.A2323G:p.I775V,TLR10:NM_001195108:exon3:c.A2281G:p.I761V,TLR10:NM_030956:exon4:c.A2323G:p.I775V	exonic	ENSG00000174123	NA	nonsynonymous SNV	ENSG00000174123:ENST00000361424:exon2:c.A2323G:p.I775V,ENSG00000174123:ENST00000506111:exon2:c.A2323G:p.I775V,ENSG00000174123:ENST00000508334:exon2:c.A2323G:p.I775V,ENSG00000174123:ENST00000308973:exon4:c.A2323G:p.I775V	NA	NA	4p14	NA	NA	NA	NA	rs4129009	0.19	0.19	0.202	0.146565	0.2068	0.2688	0.1398	0.0106	0.1472	0.18	0.38	0.14	0.02	0.1753	0.38	0.22	T	0.0	B	0.0	B	0.122	N	0.995	P	1.095	L	1.82	T	-0.933	T	0.000	T	0.03	-0.198	3.04	-5.34	-0.961	0.012	7.169	-0.197715	NA	0.27	0.173488	0.029278	NA	0.181	NA	8.7777454
774	3	97851998	97851998	A	C	exonic	OR5H1	NA	nonsynonymous SNV	OR5H1:NM_001005338:exon1:c.A457C:p.I153L	exonic	ENSG00000231192	NA	nonsynonymous SNV	ENSG00000231192:ENST00000354565:exon1:c.A457C:p.I153L	NA	NA	3q11.2	NA	NA	NA	NA	rs9845327	0.59	0.59	0.586	0.631789	0.5358	0.5228	0.585	0.8601	0.5675	0.51	0.55	0.51	0.84	0.5589	0.84	0.46	T	0.0	B	0.004	B	0.884	N	1.000	P	-0.52	N	8.96	T	-0.929	T	0.000	T	0.039	-2.165	0.005	-7.14	-4.249	-4.526	0.948	-2.165406	NA	1	0.461223	0.745062	NA	0.413	NA	8.7774104
774	21	46271452	46271452	C	T	UTR3	PTTG1IP	NM_004339:c.*44G>A	NA	NA	exonic	ENSG00000183255	NA	nonsynonymous SNV	ENSG00000183255:ENST00000445724:exon3:c.G259A:p.A87T	NA	NA	21q22.3	NA	Name=USF-1	Name=3	NA	rs235314	0.43	0.43	0.429	0.434704	0.5328	0.377	0.3285	0.3268	0.6145	0.54	0.39	0.39	0.32	0.4906	0.54	0.56	T	0.001	B	0.001	B	.	.	1.000	P	.	.	0.94	T	-0.911	T	0.000	T	0.045	2.365	13.86	-3.16	-0.795	-1.057	7.416	2.364568	2.364568	0.53	0.532674	0.378575	NA	0.435	NA	8.7772594
774	3	49721798	49721798	C	A	exonic	MST1	NA	synonymous SNV	MST1:NM_020998:exon17:c.G1965T:p.R655R	exonic	ENSG00000173531	NA	synonymous SNV	ENSG00000173531:ENST00000449682:exon17:c.G1965T:p.R655R	NA	NA	3p21.31	NA	NA	NA	NA	rs13085791	0.24	0.24	0.224	0.208866	0.3241	0.0565	0.1729	0.2632	0.1994	0.33	0.06	0.23	0.3	0.2663	0.33	.	.	.	.	.	.	.	.	0.002	P	.	.	.	.	.	.	.	.	.	0.35	5.9	-5.99	-1.376	-1.124	1.691	0.3501	NA	NA	0.299535	0.268724	NA	0.29	NA	8.7767316
774	16	5097947	5097947	A	G	exonic	C16orf89	NA	nonsynonymous SNV	C16orf89:NM_001098514:exon7:c.T887C:p.L296S,C16orf89:NM_152459:exon7:c.T887C:p.L296S	exonic	ENSG00000153446	NA	nonsynonymous SNV	ENSG00000153446:ENST00000315997:exon7:c.T887C:p.L296S,ENSG00000153446:ENST00000350219:exon7:c.T1001C:p.L334S,ENSG00000153446:ENST00000422873:exon7:c.T1001C:p.L334S,ENSG00000153446:ENST00000472572:exon7:c.T887C:p.L296S,ENSG00000153446:ENST00000474471:exon8:c.T983C:p.L328S	NA	NA	16p13.3	NA	NA	NA	NA	rs1127920	0.26	0.26	0.216	0.226038	0.3678	0.2034	0.4337	0.0325	0.2178	0.37	0.2	0.39	0.04	0.3479	0.39	0.05	D	0.651	P	0.382	B	0.459	N	1.000	P	1.59	L	1.17	T	-1.033	T	0.000	T	0.143	2.507	14.34	-2.84	-0.796	-0.056	1.885	2.506853	2.506853	0.03	0.342351	0.08985	NA	0.333	NA	8.7752824
775	1	40705726	40705726	A	T	exonic	RLF	NA	nonsynonymous SNV	RLF:NM_012421:exon8:c.A5352T:p.E1784D	exonic	ENSG00000117000	NA	nonsynonymous SNV	ENSG00000117000:ENST00000372771:exon8:c.A5352T:p.E1784D	NA	NA	1p34.2	NA	NA	NA	NA	rs10889205	0.15	0.15	0.153	0.148363	0.1819	0.0625	0.1671	0.2542	0.046	0.19	0.07	0.13	0.22	0.1769	0.25	0.63	T	0.0	B	0.001	B	0.076	N	1.000	P	0	N	2.59	T	-1.012	T	0.000	T	0.02	-1.111	0.133	-11.7	-3.937	-3.576	9.540	-1.111075	NA	0.7	0.199767	0.22719	ID=COSM426263;OCCURENCE=1(breast)	0.254	NA	8.7747664
775	6	153315695	153315695	C	T	exonic	MTRF1L	NA	nonsynonymous SNV	MTRF1L:NM_001114184:exon4:c.G640A:p.V214I,MTRF1L:NM_019041:exon4:c.G640A:p.V214I	exonic	ENSG00000112031	NA	nonsynonymous SNV	ENSG00000112031:ENST00000448966:exon1:c.G232A:p.V78I,ENSG00000112031:ENST00000414771:exon2:c.G193A:p.V65I,ENSG00000112031:ENST00000367230:exon4:c.G532A:p.V178I,ENSG00000112031:ENST00000367231:exon4:c.G640A:p.V214I,ENSG00000112031:ENST00000367233:exon4:c.G640A:p.V214I	Score=598;Name=lod=359	NA	6q25.2	NA	NA	NA	NA	rs3192723	0.2	0.2	0.164	0.236821	0.162	0.1498	0.3026	0.2663	0.317	0.16	0.13	0.3	0.28	0.2177	0.3	1	T	0.0	B	0.002	B	0.004	N	0.999	P	-0.655	N	2.85	T	-0.912	T	0.003	T	0.159	0.047	4.256	-0.015	-0.140	1.945	9.105	0.046602	NA	1	0.17907	0.248298	NA	0.225	NA	8.7745634
775	3	97983981	97983981	G	A	exonic	OR5H6	NA	nonsynonymous SNV	OR5H6:NM_001005479:exon1:c.G853A:p.D285N	exonic	ENSG00000230301	NA	nonsynonymous SNV	ENSG00000230301:ENST00000383696:exon1:c.G853A:p.D285N	NA	NA	3q11.2	NA	NA	NA	NA	rs9871143	0.33	0.33	0.311	0.318091	0.5616	0.1319	0.3372	0.2179	0.3814	0.55	0.11	0.36	0.24	0.4431	0.56	0.05	D	0.097	B	0.16	B	0.094	N	1.000	P	1.34	L	8.67	T	-1.102	T	0.000	T	0.033	0.866	8.509	2.19	1.220	0.591	6.813	0.866164	NA	0.16	0.555478	0.24966	ID=COSM149433;OCCURENCE=1(stomach),1(prostate)	0.362	NA	8.7731554
775	7	64864607	64864607	G	A	exonic	ZNF92	NA	nonsynonymous SNV	ZNF92:NM_007139:exon3:c.G1373A:p.R458H,ZNF92:NM_152626:exon4:c.G1580A:p.R527H	exonic	ENSG00000146757	NA	nonsynonymous SNV	ENSG00000146757:ENST00000431504:exon2:c.G1352A:p.R451H,ENSG00000146757:ENST00000357512:exon3:c.G1484A:p.R495H,ENSG00000146757:ENST00000450302:exon3:c.G1373A:p.R458H,ENSG00000146757:ENST00000328747:exon4:c.G1580A:p.R527H	Score=397;Name=lod=55	NA	7q11.21	NA	NA	NA	NA	rs10239197	0.32	0.32	0.317	0.348442	0.162	0.3145	0.4251	0.5809	0.2065	0.15	0.31	0.35	0.58	0.2346	0.58	1	T	0.0	B	0.0	B	.	.	1.000	P	-3.17	N	3.33	T	-0.970	T	0.000	T	0.089	-1.295	0.038	0.418	-0.525	3.533	4.014	-1.295299	NA	1	0.164884	0.493418	NA	0.254	NA	8.7718494
775	2	228883721	228883721	T	C	exonic	SPHKAP	NA	nonsynonymous SNV	SPHKAP:NM_001142644:exon7:c.A1849G:p.K617E,SPHKAP:NM_030623:exon7:c.A1849G:p.K617E	exonic	ENSG00000153820	NA	nonsynonymous SNV	ENSG00000153820:ENST00000344657:exon7:c.A1849G:p.K617E,ENSG00000153820:ENST00000392056:exon7:c.A1849G:p.K617E	Score=405;Name=lod=59	NA	2q36.3	NA	NA	NA	NA	rs3811514	0.62	0.62	0.623	0.640974	0.4891	0.624	0.6585	0.7693	0.6288	0.5	0.65	0.61	0.77	0.5738	0.77	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-1.61	N	1.23	T	-0.948	T	0.000	T	0.031	-1.043	0.203	4.05	0.389	1.423	6.185	-1.04295	NA	1	0.498953	0.737177	NA	0.63	NA	8.7714804
775	1	209782343	209782343	A	G	exonic	CAMK1G	NA	synonymous SNV	CAMK1G:NM_020439:exon8:c.A654G:p.P218P	exonic	ENSG00000008118	NA	nonsynonymous SNV	ENSG00000008118:ENST00000423146:exon7:c.A578G:p.H193R	NA	NA	1q32.2	NA	NA	NA	NA	rs11119314	0.52	0.52	0.509	0.545527	0.3867	0.5714	0.5476	0.7073	0.4622	0.37	0.57	0.49	0.71	0.4533	0.71	0	D	.	.	.	.	.	.	0.000	P	.	.	-0.08	T	-0.967	T	0.000	T	.	0.437	6.373	-10.2	-1.907	-3.434	0.807	0.436872	NA	0.01	0.38907	0.660236	ID=COSM146752;OCCURENCE=1(stomach),1(prostate)	0.449	NA	8.77093
775	11	56468155	56468155	T	G	exonic	OR9G1,OR9G9	NA	nonsynonymous SNV	OR9G1:NM_001005213:exon1:c.T292G:p.C98G,OR9G9:NM_001013358:exon1:c.T292G:p.C98G	exonic	ENSG00000174914	NA	nonsynonymous SNV	ENSG00000174914:ENST00000312153:exon1:c.T292G:p.C98G	NA	NA	11q12.1	NA	NA	NA	NA	rs11228732	0.28	0.28	0.234	0.361821	0.3091	0.2292	0.2507	0.6778	0.2045	0.27	0.19	0.2	0.46	0.2538	0.46	0.04	D	0.011	B	0.019	B	0.575	N	1.000	N	0.145	N	5.0	T	-0.982	T	0.000	T	0.435	0.244	5.319	-1.49	-0.374	-2.671	5.727	0.244291	NA	0	NA	NA	NA	0.159	NA	8.7704334
775	19	52146869	52146869	C	T	exonic	SIGLEC14	NA	nonsynonymous SNV	SIGLEC14:NM_001098612:exon6:c.G1069A:p.V357I	exonic	ENSG00000254415	NA	nonsynonymous SNV	ENSG00000254415:ENST00000360844:exon6:c.G1069A:p.V357I	Score=325;Name=lod=28	NA	19q13.41	NA	NA	NA	NA	rs138832022	0.01	0.01	0.013	0.0091853	0.0189	0.001	0.0173	0.0023	0.0112	0.02	0.0017	0.02	0.01	0.0201	0.025	0.31	T	0.792	P	0.104	B	0.019	U	1.000	N	0.205	N	1.74	T	-1.036	T	0.015	T	0.058	-0.205	3.004	1.52	0.343	-0.636	5.624	-0.205425	NA	0.05	0.024688	0.004691	NA	0.007	NA	8.7696454
775	8	22428708	22428708	A	G	exonic	SORBS3	NA	nonsynonymous SNV	SORBS3:NM_001018003:exon7:c.A691G:p.T231A,SORBS3:NM_005775:exon18:c.A1717G:p.T573A	exonic	ENSG00000120896	NA	nonsynonymous SNV	ENSG00000120896:ENST00000523348:exon3:c.A550G:p.T184A,ENSG00000120896:ENST00000428103:exon7:c.A691G:p.T231A,ENSG00000120896:ENST00000523965:exon7:c.A691G:p.T231A,ENSG00000120896:ENST00000240123:exon18:c.A1717G:p.T573A	NA	NA	8p21.3	NA	NA	NA	NA	rs1047030	0.12	0.12	0.094	0.126198	0.2127	0.0278	0.1441	0.0643	0.2096	0.22	0.03	0.14	0.06	0.1833	0.22	0.11	T	0.0	B	0.001	B	0.563	N	0.981	P	0.455	N	3.37	T	-0.938	T	0.000	T	0.341	0.03	4.169	-5.08	-0.975	-0.287	1.634	0.029859	NA	0.14	0.170414	0.074315	NA	0.101	NA	8.7669194
776	6	46135984	46135984	G	T	exonic	ENPP5	NA	nonsynonymous SNV	ENPP5:NM_021572:exon2:c.C16A:p.L6I	exonic	ENSG00000112796	NA	nonsynonymous SNV	ENSG00000112796:ENST00000230565:exon2:c.C16A:p.L6I,ENSG00000112796:ENST00000371383:exon3:c.C16A:p.L6I	NA	NA	6p21.1	NA	NA	NA	NA	rs3806995	0.42	0.42	0.406	0.444289	0.5298	0.4494	0.4467	0.1899	0.6933	0.53	0.4	0.49	0.19	0.5167	0.53	0.22	T	0.008	B	0.008	B	0.622	N	1.000	P	0.55	N	-0.86	T	-1.036	T	0.106	T	0.072	0.319	5.728	3.41	1.305	1.068	5.357	0.318747	NA	0.13	0.521959	0.228108	NA	0.406	NA	8.7648744
776	5	148207447	148207447	G	C	exonic	ADRB2	NA	synonymous SNV	ADRB2:NM_000024:exon1:c.G1053C:p.G351G	exonic	ENSG00000169252	NA	synonymous SNV	ENSG00000169252:ENST00000305988:exon1:c.G1053C:p.G351G	Score=454;Name=lod=93	NA	5q32	Score=864;Name=V$IK1_01	Name=c-Fos	Name=31	NA	rs1042719	0.36	0.36	0.357	0.374201	0.2793	0.4772	0.3516	0.3533	0.41	0.28	0.48	0.33	0.34	0.3379	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.117764	NA	NA	0.286977	0.352701	NA	0.225	NA	8.7624896
776	6	147635413	147635413	A	G	exonic	STXBP5	NA	nonsynonymous SNV	STXBP5:NM_001127715:exon13:c.A1307G:p.N436S,STXBP5:NM_139244:exon13:c.A1307G:p.N436S	exonic	ENSG00000164506	NA	nonsynonymous SNV	ENSG00000164506:ENST00000179882:exon13:c.A320G:p.N107S,ENSG00000164506:ENST00000321680:exon13:c.A1307G:p.N436S,ENSG00000164506:ENST00000367480:exon13:c.A1307G:p.N436S,ENSG00000164506:ENST00000367481:exon13:c.A1307G:p.N436S	Score=603;Name=lod=375	NA	6q24.3	Score=936;Name=V$CDPCR3HD_01	NA	NA	NA	rs1039084	0.44	0.44	0.433	0.457069	0.5229	0.2937	0.5375	0.4251	0.544	0.53	0.3	0.5	0.42	0.5062	0.54	1	T	0.0	B	0.001	B	0.000	N	0.000	P	-0.805	N	1.62	T	-0.997	T	0.021	T	0.009	-0.082	3.599	1.08	0.200	3.391	7.001	-0.08206	NA	1	0.541744	0.431684	NA	0.406	NA	8.7624894
776	9	116224374	116224374	G	T	exonic	RGS3	NA	nonsynonymous SNV	RGS3:NM_144488:exon4:c.G308T:p.G103V	exonic	ENSG00000138835	NA	nonsynonymous SNV	ENSG00000138835:ENST00000350696:exon3:c.G308T:p.G103V,ENSG00000138835:ENST00000374140:exon4:c.G308T:p.G103V	NA	NA	9q32	NA	Name=HNF4A_(H-171)	NA	NA	rs113565749	0.02	0.02	0.013	0.00958466	0.0278	NA	0.0216	0.0023	0.002	0.03	NA	0.02	0.01	0.0168	0.03	0.09	T	0.745	P	0.119	B	0.492	N	1.000	N	0.55	N	0.88	T	-1.053	T	0.022	T	0.177	1.268	10.14	1.04	0.105	-0.015	6.184	1.267558	1.267558	0	0.026409	0.005414	NA	0.014	NA	8.7623244
776	19	58370727	58370727	T	G	exonic	ZNF587	NA	nonsynonymous SNV	ZNF587:NM_001204817:exon3:c.T944G:p.L315R,ZNF587:NM_032828:exon3:c.T947G:p.L316R	exonic	ENSG00000198466	NA	nonsynonymous SNV	ENSG00000198466:ENST00000419854:exon2:c.T818G:p.L273R,ENSG00000198466:ENST00000339656:exon3:c.T947G:p.L316R,ENSG00000198466:ENST00000423137:exon3:c.T944G:p.L315R	NA	NA	19q13.43	NA	NA	NA	NA	rs71354064	0.31	0.31	0.19	0.288538	0.2803	0.4087	0.3775	0.2421	0.1728	0.25	0.46	0.33	0.21	0.2918	0.46	1	T	0.0	B	0.0	B	.	.	1.000	N	-1.145	N	2.7	T	-0.945	T	0.000	T	0.102	-2.985	0.001	0.675	-1.268	-2.624	5.214	-2.984521	NA	1	NA	NA	NA	0.109	NA	8.7612334
776	6	26107790	26107790	G	T	exonic	HIST1H1T	NA	nonsynonymous SNV	HIST1H1T:NM_005323:exon1:c.C532A:p.Q178K	exonic	ENSG00000187475	NA	nonsynonymous SNV	ENSG00000187475:ENST00000338379:exon1:c.C532A:p.Q178K	NA	NA	6p22.2	NA	NA	NA	NA	rs198845	0.24	0.24	0.238	0.244409	0.3708	0.1319	0.304	0.1059	0.3753	0.39	0.1	0.31	0.12	0.3313	0.39	0.92	T	0.483	P	0.162	B	0.420	U	1.000	P	0	N	3.81	T	-0.992	T	0.003	T	0.098	0.703	7.748	4.17	2.656	0.731	14.822	0.702736	NA	0.66	0.371512	0.164321	NA	0.297	NA	8.7597214
776	18	56204991	56204991	C	T	exonic	ALPK2	NA	nonsynonymous SNV	ALPK2:NM_052947:exon5:c.G2428A:p.G810S	exonic	ENSG00000198796	NA	nonsynonymous SNV	ENSG00000198796:ENST00000361673:exon5:c.G2428A:p.G810S	NA	NA	18q21.32	Score=839;Name=V$RFX1_01	Name=Pol2-4H8,POU2F2,Pol2,Oct-2	NA	NA	rs3809970	0.44	0.44	0.433	0.403554	0.5716	0.2361	0.4265	0.4312	0.3497	0.59	0.24	0.51	0.38	0.469	0.59	0.15	T	0.94	P	0.534	P	0.171	N	1.000	P	1.59	L	0.64	T	-0.949	T	0.000	T	0.037	2.013	12.69	1.65	0.021	0.230	2.451	2.012911	2.012911	0	0.533721	0.450068	NA	0.529	NA	8.7590124
776	4	10022981	10022981	C	T	exonic	SLC2A9	NA	nonsynonymous SNV	SLC2A9:NM_020041:exon1:c.G73A:p.G25R	exonic	ENSG00000109667	NA	nonsynonymous SNV	ENSG00000109667:ENST00000264784:exon1:c.G73A:p.G25R	NA	NA	4p16.1	NA	Name=TBP	Name=60	NA	rs2276961	0.42	0.42	0.41	0.407348	0.5278	0.4177	0.4395	0.149	0.5992	0.55	0.44	0.47	0.17	0.5103	0.55	.	.	0.013	B	0.002	B	0.000	N	1.000	P	0	N	-1.52	D	-0.985	T	0.000	T	0.06	1.466	10.85	-0.398	-0.155	-0.132	3.668	1.465567	1.465567	0	0.536977	0.216069	ID=COSM149645;OCCURENCE=1(stomach)	0.362	NA	8.7582564
776	14	20850093	20850093	C	T	exonic	TEP1	NA	nonsynonymous SNV	TEP1:NM_007110:exon30:c.G4403A:p.C1468Y	exonic	ENSG00000129566	NA	nonsynonymous SNV	ENSG00000129566:ENST00000555008:exon18:c.G2432A:p.C811Y,ENSG00000129566:ENST00000556935:exon28:c.G4079A:p.C1360Y,ENSG00000129566:ENST00000262715:exon30:c.G4403A:p.C1468Y,ENSG00000129566:ENST00000555727:exon30:c.G4403A:p.C1468Y	Score=461;Name=lod=100	NA	14q11.2	NA	NA	NA	NA	rs1713456	0.22	0.22	0.239	0.239217	0.1889	0.0992	0.1888	0.4448	0.1933	0.2	0.09	0.2	0.43	0.2036	0.43	1	T	0.0	B	0.0	B	0.032	N	0.000	P	-1.935	N	1.01	T	-0.928	T	0.000	T	0.301	-0.756	0.8	3.82	0.325	0.613	4.646	-0.755646	NA	1	0.183605	0.379483	NA	0.181	NA	8.7572284
776	5	168180081	168180081	C	T	exonic	SLIT3	NA	nonsynonymous SNV	SLIT3:NM_001271946:exon18:c.G1852A:p.G618S,SLIT3:NM_003062:exon18:c.G1852A:p.G618S	exonic	ENSG00000184347	NA	nonsynonymous SNV	ENSG00000184347:ENST00000332966:exon18:c.G1852A:p.G618S,ENSG00000184347:ENST00000404867:exon18:c.G1852A:p.G618S,ENSG00000184347:ENST00000519560:exon18:c.G1852A:p.G618S	Score=512;Name=lod=160	NA	5q34	NA	NA	NA	NA	rs10036727	0.56	0.56	0.581	0.570887	0.5258	0.5258	0.5072	0.705	0.5276	0.52	0.57	0.51	0.67	0.5383	0.69	1	T	0.0	B	0.001	B	0.000	N	0.999	P	-1.18	N	0.48	T	-0.935	T	0.000	T	0.247	1.339	10.4	5.34	0.879	6.302	11.250	1.339436	1.339436	1	0.512907	0.694281	NA	0.63	NA	8.7563264
776	7	90014408	90014408	G	A	exonic	GTPBP10	NA	nonsynonymous SNV	GTPBP10:NM_001042717:exon8:c.G867A:p.M289I,GTPBP10:NM_033107:exon10:c.G1104A:p.M368I	exonic	ENSG00000105793	NA	nonsynonymous SNV	ENSG00000105793:ENST00000257659:exon8:c.G867A:p.M289I,ENSG00000105793:ENST00000222511:exon10:c.G1104A:p.M368I	NA	NA	7q21.13	NA	NA	NA	NA	rs17863999	0.17	0.17	0.169	0.1873	0.1859	0.1101	0.2017	0.2216	0.2117	0.18	0.12	0.2	0.18	0.1862	0.23	.	.	0.0	B	0.0	B	0.013	N	1.000	P	-0.755	N	2.87	T	-0.988	T	0.000	T	0.007	-0.754	0.806	-3.82	-1.363	-0.043	7.110	-0.75369	NA	0.57	0.205349	0.22719	NA	0.21	NA	8.7558844
777	22	18300594	18300594	G	A	exonic	MICAL3	NA	synonymous SNV	MICAL3:NM_015241:exon26:c.C4833T:p.D1611D	exonic	ENSG00000243156	NA	synonymous SNV	ENSG00000243156:ENST00000441493:exon26:c.C4833T:p.D1611D	NA	NA	22q11.21	NA	NA	NA	NA	rs11704160	0.17	0.17	0.152	0.151158	0.3171	0.0863	0.1859	0.028	0.1892	0.3	0.08	0.2	0.04	0.2671	0.33	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.925	T	0.000	T	.	0.607	7.269	-9.8	-2.868	-1.313	21.818	0.606705	NA	NA	0.328673	0.071151	NA	0.138	NA	8.7537936
777	1	15832543	15832543	T	C	exonic	CASP9	NA	nonsynonymous SNV	CASP9:NM_001229:exon5:c.A662G:p.Q221R,CASP9:NM_032996:exon5:c.A413G:p.Q138R	exonic	ENSG00000132906	NA	nonsynonymous SNV	ENSG00000132906:ENST00000333868:exon5:c.A662G:p.Q221R,ENSG00000132906:ENST00000375890:exon5:c.A413G:p.Q138R,ENSG00000132906:ENST00000447522:exon5:c.A413G:p.Q138R,ENSG00000132906:ENST00000546424:exon5:c.A662G:p.Q221R	NA	NA	1p36.21	NA	NA	NA	NA	rs1052576	0.6	0.6	0.607	0.584864	0.5149	0.6538	0.4986	0.7398	0.4376	0.54	0.63	0.5	0.74	0.5369	0.74	1	T	0.0	B	0.001	B	0.128	N	0.391	P	-0.52	N	2.1	T	-0.917	T	0.000	T	0.32	0.441	6.397	-9.49	-2.385	-1.738	15.897	0.441447	NA	0.55	0.52814	0.703813	NA	0.406	NA	8.7533934
777	19	35718938	35718938	C	T	exonic	FAM187B	NA	nonsynonymous SNV	FAM187B:NM_152481:exon1:c.G646A:p.V216I	exonic	ENSG00000177558	NA	nonsynonymous SNV	ENSG00000177558:ENST00000324675:exon1:c.G646A:p.V216I	NA	NA	19q13.12	NA	NA	NA	NA	rs564117	0.15	0.15	0.157	0.172324	0.2008	0.0188	0.1354	0.2716	0.1933	0.19	0.01	0.17	0.25	0.1844	0.26	0.92	T	0.102	B	0.02	B	0.480	N	1.000	P	-0.145	N	1.93	T	-1.022	T	0.000	T	0.025	0.492	6.67	-10.0	-1.365	-2.444	4.783	0.492149	NA	1	0.195233	0.263504	ID=COSM1392802;OCCURENCE=1(large_intestine)	0.123	NA	8.7529004
777	11	130784694	130784694	C	T	exonic	SNX19	NA	nonsynonymous SNV	SNX19:NM_014758:exon1:c.G1141A:p.G381S	exonic	ENSG00000120451	NA	nonsynonymous SNV	ENSG00000120451:ENST00000265909:exon1:c.G1141A:p.G381S,ENSG00000120451:ENST00000533214:exon1:c.G1141A:p.G381S	Score=449;Name=lod=89	NA	11q24.3	NA	NA	NA	NA	rs61736758	0.14	0.14	0.135	0.127596	0.1988	0.1538	0.0893	0.0492	0.1605	0.21	0.17	0.1	0.05	0.1743	0.21	0.66	T	0.028	B	0.007	B	0.856	N	0.000	P	-0.145	N	2.3	T	-0.905	T	0.000	T	0.076	1.824	12.06	-2.47	-0.858	-0.006	11.392	1.824359	1.824359	0.37	0.207936	0.071331	NA	0.217	NA	8.7522974
777	15	52901283	52901283	T	C	exonic	FAM214A	NA	nonsynonymous SNV	FAM214A:NM_019600:exon6:c.A1828G:p.T610A	exonic	ENSG00000047346	NA	nonsynonymous SNV	ENSG00000047346:ENST00000399202:exon5:c.A1564G:p.T522A,ENSG00000047346:ENST00000546305:exon5:c.A1849G:p.T617A,ENSG00000047346:ENST00000261844:exon6:c.A1828G:p.T610A,ENSG00000047346:ENST00000534964:exon6:c.A1828G:p.T610A	NA	NA	15q21.3	NA	NA	NA	NA	rs61731670	0.35	0.35	0.395	0.430711	0.167	0.8482	0.2968	0.4402	0.3538	0.12	0.74	0.24	0.32	0.265	0.74	0.29	T	0.002	B	0.01	B	0.000	N	1.000	P	0	N	1.53	T	-1.028	T	0.000	T	0.096	-0.69	1.003	2.07	0.452	1.242	5.286	-0.690316	NA	0.09	0.150809	0.363488	NA	NA	NA	8.7505244
777	11	117222592	117222592	G	A	exonic	CEP164	NA	nonsynonymous SNV	CEP164:NM_001271933:exon4:c.G281A:p.S94N,CEP164:NM_014956:exon5:c.G281A:p.S94N	exonic	ENSG00000110274	NA	nonsynonymous SNV	ENSG00000110274:ENST00000533153:exon3:c.G143A:p.S48N,ENSG00000110274:ENST00000525416:exon4:c.G143A:p.S48N,ENSG00000110274:ENST00000533570:exon4:c.G281A:p.S94N,ENSG00000110274:ENST00000278935:exon5:c.G281A:p.S94N,ENSG00000110274:ENST00000525734:exon5:c.G281A:p.S94N,ENSG00000110274:ENST00000527609:exon5:c.G281A:p.S94N	Score=521;Name=lod=174	NA	11q23.3	NA	NA	NA	NA	rs490262	0.19	0.19	0.191	0.210264	0.174	0.1151	0.2594	0.2595	0.2444	0.16	0.11	0.26	0.29	0.2091	0.29	1	T	0.0	B	0.001	B	0.008	N	1.000	P	-1.245	N	0.1	T	-1.007	T	0.000	T	0.154	0.901	8.664	3.69	0.527	0.872	9.037	0.901215	NA	1	0.199953	0.275102	NA	0.188	NA	8.7502804
777	1	248458760	248458760	C	A	exonic	OR2T12	NA	nonsynonymous SNV	OR2T12:NM_001004692:exon1:c.G121T:p.A41S	exonic	ENSG00000177201	NA	nonsynonymous SNV	ENSG00000177201:ENST00000317996:exon1:c.G121T:p.A41S	NA	NA	1q44	NA	NA	NA	NA	rs12135684	0.24	0.24	0.159	0.251198	0.1849	0.3591	0.2651	0.1316	0.3599	0.2	0.35	0.24	0.17	0.2192	0.35	0.74	T	0.001	B	0.008	B	0.306	U	1.000	P	0.365	N	5.54	T	-1.028	T	0.000	T	0.091	0.228	5.228	-3.09	-0.223	-7.823	6.168	0.22759	NA	0.81	0.181395	0.131866	ID=COSM1341134;OCCURENCE=1(large_intestine)	0.043	NA	8.7478384
778	8	87679303	87679303	A	C	exonic	CNGB3	NA	nonsynonymous SNV	CNGB3:NM_019098:exon6:c.T702G:p.C234W	exonic	ENSG00000170289	NA	nonsynonymous SNV	ENSG00000170289:ENST00000320005:exon6:c.T702G:p.C234W	Score=513;Name=lod=162	NA	8q21.3	NA	NA	NA	NA	rs6471482	0.93	0.93	0.94	0.957468	0.8608	0.999	0.9294	0.9947	0.9836	0.85	1	0.91	0.99	0.8946	1	1	T	0.0	B	0.0	B	0.000	N	0.002	P	-2.865	N	2.98	T	-0.938	T	0.000	T	0.2	0.716	7.812	5.55	1.359	4.933	15.985	0.715903	NA	1	0.833488	0.966636	NA	0.971	NA	8.7444454
778	3	124746049	124746049	A	G	exonic	HEG1	NA	nonsynonymous SNV	HEG1:NM_020733:exon3:c.T913C:p.S305P	exonic	ENSG00000173706	NA	nonsynonymous SNV	ENSG00000173706:ENST00000311127:exon3:c.T913C:p.S305P	NA	NA	3q21.2	NA	NA	NA	NA	rs2981546	0.47	0.47	0.465	0.488818	0.5457	0.4782	0.4755	0.3744	0.6053	0.55	0.49	0.47	0.36	0.5389	0.55	.	.	0.011	B	0.007	B	.	.	1.000	P	0.665	N	0.86	T	-0.975	T	0.000	T	0.117	1.422	10.69	-9.56	-1.952	-1.905	4.513	1.421656	1.421656	0.01	0.504695	0.361223	NA	0.399	NA	8.7440384
778	4	68829109	68829109	C	T	exonic	TMPRSS11A	NA	nonsynonymous SNV	TMPRSS11A:NM_001114387:exon1:c.G3A:p.M1I,TMPRSS11A:NM_182606:exon1:c.G3A:p.M1I	exonic	ENSG00000187054	NA	nonsynonymous SNV	ENSG00000187054:ENST00000334830:exon1:c.G3A:p.M1I,ENSG00000187054:ENST00000396188:exon1:c.G3A:p.M1I	NA	NA	4q13.2	NA	NA	NA	NA	rs977728	0.2	0.2	0.17	0.203275	0.2177	0.1835	0.3473	0.115	0.226	0.21	0.19	0.3	0.11	0.207	0.3	0.05	D	0.0	B	0.001	B	0.010	N	0.000	P	.	.	-2.32	D	-1.051	T	0.000	T	0.176	-1.548	0.015	1.27	0.133	-0.011	5.866	-1.54785	NA	0.2	0.165698	0.134135	ID=COSM149683;OCCURENCE=1(stomach)	0.145	NA	8.7429354
778	7	76069811	76069811	T	C	exonic	ZP3	NA	nonsynonymous SNV	ZP3:NM_001110354:exon7:c.T943C:p.S315P,ZP3:NM_007155:exon8:c.T790C:p.S264P	exonic	ENSG00000188372	NA	nonsynonymous SNV	ENSG00000188372:ENST00000416245:exon6:c.T415C:p.S139P,ENSG00000188372:ENST00000394857:exon7:c.T943C:p.S315P,ENSG00000188372:ENST00000336517:exon8:c.T790C:p.S264P	NA	NA	7q11.23	NA	NA	NA	NA	rs2906999	0.5	0.5	0.44	0.591054	0.5209	0.5427	0.5908	0.6558	0.6258	0.46	0.48	0.52	0.59	0.5636	0.6	0.92	T	0.0	B	0.0	B	0.648	N	1.000	P	-0.87	N	2.77	T	-0.958	T	0.000	T	0.346	-1.174	0.087	-7.74	-2.339	-1.059	1.131	-1.174174	NA	1	0.506163	0.599637	NA	0.007	NA	8.7426704
778	17	39383012	39383012	C	T	exonic	KRTAP9-2	NA	nonsynonymous SNV	KRTAP9-2:NM_031961:exon1:c.C106T:p.P36S	exonic	ENSG00000239886	NA	nonsynonymous SNV	ENSG00000239886:ENST00000377721:exon1:c.C106T:p.P36S,ENSG00000239886:ENST00000455970:exon1:c.C106T:p.P36S	Score=448;Name=lod=88	NA	17q21.2	NA	NA	NA	NA	rs9903833	0.55	0.55	0.49	NA	NA	NA	NA	NA	NA	0.55	0.52	0.63	0.53	0.5907	0.63	1	T	0.072	B	0.026	B	.	.	0.997	P	-0.74	N	5.57	T	-1.057	T	0.000	T	0.189	0.589	7.176	0.535	0.134	-2.240	7.736	0.588686	NA	0.45	NA	NA	NA	0.087	NA	8.7426334
778	7	141672705	141672705	G	A	exonic	TAS2R38	NA	nonsynonymous SNV	TAS2R38:NM_176817:exon1:c.C785T:p.A262V	exonic	ENSG00000257138	NA	nonsynonymous SNV	ENSG00000257138:ENST00000547270:exon1:c.C785T:p.A262V	NA	NA	7q34	NA	NA	NA	NA	rs1726866	0.41	0.41	0.422	0.425519	0.5388	0.3244	0.2853	0.3328	0.638	0.55	0.35	0.34	0.31	0.5075	0.55	0.05	D	0.097	B	0.117	B	0.041	N	1.000	P	1.75	L	1.22	T	-0.947	T	0.000	T	0.157	0.924	8.762	2.94	0.712	0.902	6.582	0.923749	NA	0.07	0.544535	0.341353	ID=COSM150406;OCCURENCE=1(stomach)	0.464	CLINSIG=drug-response;CLNDBN=Phenylthiocarbamide_tasting;CLNREVSTAT=single;CLNACC=RCV000003039.1;CLNDSDB=MedGen;CLNDSDBID=C1868398	8.7424984
778	20	31812923	31812923	G	A	exonic	BPIFA3	NA	nonsynonymous SNV	BPIFA3:NM_001042439:exon3:c.G298A:p.V100I,BPIFA3:NM_178466:exon4:c.G406A:p.V136I	exonic	ENSG00000131059	NA	nonsynonymous SNV	ENSG00000131059:ENST00000375452:exon3:c.G298A:p.V100I,ENSG00000131059:ENST00000375454:exon4:c.G406A:p.V136I	NA	NA	20q11.21	NA	NA	NA	NA	rs3818222	0.65	0.65	0.659	0.664337	0.5229	0.8115	0.428	0.789	0.6575	0.53	0.81	0.46	0.77	0.5585	0.81	1	T	0.0	B	0.001	B	0.622	N	1.000	P	-0.55	N	3.55	T	-0.999	T	0.000	T	0.021	-1.056	0.188	-5.46	-1.846	-1.653	4.461	-1.055829	NA	0.86	0.509535	0.72719	NA	0.659	NA	8.7423984
778	3	49455330	49455330	C	T	exonic	AMT	NA	synonymous SNV	AMT:NM_001164710:exon7:c.G822A:p.R274R,AMT:NM_001164711:exon7:c.G786A:p.R262R,AMT:NM_000481:exon8:c.G954A:p.R318R,AMT:NM_001164712:exon8:c.G954A:p.R318R	exonic	ENSG00000145020	NA	synonymous SNV	ENSG00000145020:ENST00000430521:exon7:c.G786A:p.R262R,ENSG00000145020:ENST00000458307:exon7:c.G822A:p.R274R,ENSG00000145020:ENST00000538581:exon7:c.G786A:p.R262R,ENSG00000145020:ENST00000273588:exon8:c.G954A:p.R318R,ENSG00000145020:ENST00000395338:exon8:c.G954A:p.R318R,ENSG00000145020:ENST00000546031:exon8:c.G663A:p.R221R	Score=536;Name=lod=201	NA	3p21.31	NA	NA	NA	NA	rs11715915	0.23	0.23	0.211	0.201278	0.336	0.0734	0.17	0.2126	0.2014	0.34	0.09	0.22	0.25	0.2748	0.34	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.963	T	0.000	T	.	1.059	9.326	2.73	1.011	0.849	6.953	1.059402	NA	NA	0.313605	0.240808	NA	0.275	NA	8.7422616
778	14	53098902	53098902	G	A	exonic	GPR137C	NA	nonsynonymous SNV	GPR137C:NM_001099652:exon4:c.G742A:p.V248I	exonic	ENSG00000180998	NA	nonsynonymous SNV	ENSG00000180998:ENST00000321662:exon4:c.G742A:p.V248I	NA	NA	14q22.1	NA	NA	NA	NA	rs762063	0.46	0.46	0.444	0.41234	0.5626	0.4157	0.5288	0.2458	0.3967	0.57	0.44	0.54	0.25	0.4967	0.57	0.22	T	0.017	B	0.003	B	0.001	N	1.000	P	0.97	L	0.95	T	-0.931	T	0.000	T	0.146	1.778	11.91	3.32	1.149	3.034	7.554	1.778467	1.778467	0.38	0.531788	0.285526	NA	0.428	NA	8.7422454
778	10	44053013	44053013	G	C	exonic	ZNF239	NA	nonsynonymous SNV	ZNF239:NM_001099283:exon2:c.C515G:p.A172G,ZNF239:NM_005674:exon2:c.C515G:p.A172G,ZNF239:NM_001099284:exon3:c.C515G:p.A172G,ZNF239:NM_001099282:exon4:c.C515G:p.A172G	exonic	ENSG00000196793	NA	nonsynonymous SNV	ENSG00000196793:ENST00000306006:exon2:c.C515G:p.A172G,ENSG00000196793:ENST00000535642:exon2:c.C515G:p.A172G,ENSG00000196793:ENST00000426961:exon3:c.C515G:p.A172G,ENSG00000196793:ENST00000374446:exon4:c.C515G:p.A172G	NA	NA	10q11.21	NA	Name=SETDB1	NA	NA	rs2230660	0.52	0.52	0.518	NA	NA	NA	NA	NA	NA	0.55	0.57	0.48	0.45	0.5572	0.58	0.02	D	0.501	P	0.118	B	.	.	1.000	P	1.15	L	3.31	T	-0.992	T	0.000	T	0.053	2.569	14.55	0.271	0.051	-0.510	4.344	2.569341	2.569341	0.08	0.535809	0.528133	NA	0.543	NA	8.7403244
778	6	32629809	32629809	C	T	exonic	HLA-DQB1	NA	nonsynonymous SNV	HLA-DQB1:NM_001243961:exon3:c.G596A:p.R199H,HLA-DQB1:NM_002123:exon3:c.G596A:p.R199H	exonic	ENSG00000179344	NA	nonsynonymous SNV	ENSG00000179344:ENST00000399082:exon2:c.G326A:p.R109H,ENSG00000179344:ENST00000374943:exon3:c.G596A:p.R199H,ENSG00000179344:ENST00000399079:exon3:c.G596A:p.R199H,ENSG00000179344:ENST00000434651:exon3:c.G596A:p.R199H,ENSG00000179344:ENST00000399084:exon4:c.G596A:p.R199H	NA	NA	6p21.32	NA	Name=Pol2-4H8	NA	NA	rs701564	0.22	0.22	0.215	0.240815	0.1809	0.3135	0.2017	0.1997	0.3108	0.17	0.32	0.21	0.2	0.2176	0.32	0.05	D	0.006	B	0.004	B	0.004	N	1.000	P	.	.	4.08	T	-0.924	T	0.004	T	0.263	-0.779	0.734	-1.67	-0.872	-0.443	10.097	-0.778745	NA	0.13	0.195	0.18188	ID=COSM328184;OCCURENCE=1(pancreas)	0.022	NA	8.7398334
778	10	101563815	101563815	G	A	exonic	ABCC2	NA	nonsynonymous SNV	ABCC2:NM_000392:exon10:c.G1249A:p.V417I	exonic	ENSG00000023839	NA	nonsynonymous SNV	ENSG00000023839:ENST00000370449:exon10:c.G1249A:p.V417I	NA	NA	10q24.2	NA	NA	NA	NA	rs2273697	0.17	0.17	0.185	0.186502	0.2038	0.0962	0.1585	0.1891	0.2781	0.2	0.13	0.16	0.2	0.1953	0.2	0.15	T	0.008	B	0.032	B	0.157	N	0.014	P	0.49	N	-2.76	D	-1.097	T	0.001	T	0.012	1.904	12.32	-10.3	-1.996	-0.363	20.178	1.903578	1.903578	0.17	0.194767	0.187018	ID=COSM1179584;OCCURENCE=1(prostate)	0.138	NA	8.7394664
778	6	32609126	32609126	T	C	exonic	HLA-DQA1	NA	nonsynonymous SNV	HLA-DQA1:NM_002122:exon2:c.T122C:p.F41S	exonic	ENSG00000196735	NA	nonsynonymous SNV	ENSG00000196735:ENST00000343139:exon2:c.T122C:p.F41S,ENSG00000196735:ENST00000374949:exon2:c.T122C:p.F41S,ENSG00000196735:ENST00000395363:exon2:c.T122C:p.F41S,ENSG00000196735:ENST00000496318:exon2:c.T122C:p.F41S	Score=259;Name=lod=15	NA	6p21.32	NA	Name=Pol2-4H8	NA	NA	rs1071630	0.57	0.57	0.48	0.553115	0.5964	0.5446	0.6974	0.5076	0.4765	0.58	0.56	0.68	0.47	0.5567	0.68	1	T	0.001	B	0.005	B	0.020	N	0.992	P	-3.11	N	5.32	T	-1.059	T	0.000	T	0.69	-0.859	0.529	2.95	0.401	0.696	6.679	-0.858787	NA	1	0.440882	0.388334	NA	0.319	NA	8.7393514
778	10	72289778	72289778	C	T	exonic	PALD1	NA	nonsynonymous SNV	PALD1:NM_014431:exon4:c.C422T:p.S141L	exonic	ENSG00000107719	NA	nonsynonymous SNV	ENSG00000107719:ENST00000263563:exon4:c.C422T:p.S141L	NA	NA	10q22.1	Score=752;Name=V$LUN1_01	NA	NA	NA	rs2275060	0.17	0.17	0.149	0.127995	0.2147	0.2173	0.1816	0.0113	0.0665	0.23	0.23	0.16	0.01	0.1795	0.23	0.39	T	0.0	B	0.004	B	0.558	N	1.000	P	0.835	L	1.2	T	-0.981	T	0.000	T	0.032	1.266	10.13	-4.24	-0.596	-0.330	2.882	1.266029	1.266029	0.29	0.2	0.043123	NA	0.101	NA	8.7391334
778	16	847743	847743	C	T	exonic	CHTF18	NA	nonsynonymous SNV	CHTF18:NM_022092:exon21:c.C2783T:p.P928L	exonic	ENSG00000127586	NA	nonsynonymous SNV	ENSG00000127586:ENST00000455171:exon20:c.C2867T:p.P956L,ENSG00000127586:ENST00000262315:exon21:c.C2783T:p.P928L,ENSG00000127586:ENST00000317063:exon23:c.C3410T:p.P1137L	NA	NA	16p13.3	Score=932;Name=V$IK2_01	NA	NA	NA	rs2294451	0.17	0.17	0.154	0.151757	0.1958	0.245	0.147	0.0144	0.1994	0.2	0.26	0.16	0.03	0.1914	0.26	0.2	T	0.004	B	0.002	B	0.052	N	1.000	P	1.24	L	2.78	T	-0.943	T	0.000	T	0.049	1.019	9.164	0.291	-0.182	-2.115	8.234	1.019354	NA	0.08	0.208434	0.036453	NA	0.116	NA	8.7376994
778	12	52844265	52844265	T	C	exonic	KRT6B	NA	nonsynonymous SNV	KRT6B:NM_005555:exon2:c.A680G:p.N227S	exonic	ENSG00000185479	NA	nonsynonymous SNV	ENSG00000185479:ENST00000252252:exon2:c.A680G:p.N227S	NA	NA	12q13.13	NA	NA	NA	NA	rs652423	0.35	0.35	0.337	NA	NA	NA	NA	NA	NA	0.3	0.42	0.3	0.39	0.2915	0.42	1	T	0.025	B	0.03	B	0.283	N	1.000	P	-1.065	N	-2.7	D	-1.068	T	0.000	T	0.018	-1.579	0.014	-1.87	-0.421	-1.048	5.590	-1.578709	NA	1	0.304419	0.330232	NA	0.268	NA	8.7374144
778	6	32634369	32634369	C	A	exonic	HLA-DQB1	NA	nonsynonymous SNV	HLA-DQB1:NM_001243961:exon1:c.G16T:p.A6S,HLA-DQB1:NM_002123:exon1:c.G16T:p.A6S	exonic	ENSG00000179344	NA	nonsynonymous SNV	ENSG00000179344:ENST00000374943:exon1:c.G16T:p.A6S,ENSG00000179344:ENST00000399079:exon1:c.G16T:p.A6S,ENSG00000179344:ENST00000399082:exon1:c.G16T:p.A6S,ENSG00000179344:ENST00000434651:exon1:c.G16T:p.A6S,ENSG00000179344:ENST00000484729:exon1:c.G16T:p.A6S,ENSG00000179344:ENST00000399084:exon2:c.G16T:p.A6S	NA	NA	6p21.32	NA	Name=RFX5_(N-494),Pol2,Pol2-4H8,TAF1,POU2F2,NFKB,Oct-2	NA	NA	rs1049056	0.21	0.21	0.172	0.214058	0.2008	0.2411	0.1527	0.2322	0.2188	0.23	0.16	0.19	0.25	0.2169	0.25	0.05	D	0.214	B	0.056	B	0.189	U	1.000	P	1.275	L	6.02	T	-0.934	T	0.006	T	0.328	1.624	11.39	-0.028	0.070	0.222	3.240	1.624062	1.624062	0.02	0.179878	0.208463	NA	0.159	NA	8.7357554
779	2	86317037	86317037	G	C	exonic	POLR1A	NA	nonsynonymous SNV	POLR1A:NM_015425:exon4:c.C448G:p.P150A	exonic	ENSG00000068654	NA	nonsynonymous SNV	ENSG00000068654:ENST00000409024:exon2:c.C93G:p.I31M,ENSG00000068654:ENST00000424089:exon2:c.C93G:p.I31M,ENSG00000068654:ENST00000263857:exon4:c.C448G:p.P150A,ENSG00000068654:ENST00000409681:exon4:c.C448G:p.P150A	Score=454;Name=lod=93	NA	2p11.2	NA	NA	NA	NA	rs4832242	0.76	0.76	0.739	0.754992	0.8698	0.753	0.8473	0.5113	0.9029	0.87	0.77	0.87	0.49	0.8496	0.88	0.94	T	0.009	B	0.01	B	0.052	N	1.000	P	0.19	N	2.1	T	-0.994	T	0.000	T	0.037	-0.396	2.142	-5.44	-1.809	-1.423	11.261	-0.396452	NA	0.62	0.879289	0.587293	NA	0.768	NA	8.7346444
779	12	80747209	80747209	C	G	exonic	OTOGL	NA	nonsynonymous SNV	OTOGL:NM_173591:exon45:c.C5485G:p.L1829V	exonic	ENSG00000165899	NA	nonsynonymous SNV	ENSG00000165899:ENST00000458043:exon45:c.C5485G:p.L1829V,ENSG00000165899:ENST00000547103:exon45:c.C5449G:p.L1817V	NA	NA	12q21.31	NA	Name=ERalpha_a,GATA-2,ELF1_(SC-631)	Name=77	NA	rs7312569	0.15	0.15	0.146	0.173323	0.1819	0.0575	0.2075	0.1846	0.2444	0.18	0.05	0.21	0.17	0.2233	0.21	0.26	T	.	.	.	.	.	.	0.000	P	1.41	L	0.54	T	-1.061	T	0.000	T	0.248	0.351	5.903	0.452	-0.156	0.246	3.083	0.350723	NA	0.11	0.195395	0.177046	NA	0.08	NA	8.7327384
779	6	30131546	30131546	A	G	exonic	TRIM15	NA	nonsynonymous SNV	TRIM15:NM_033229:exon1:c.A85G:p.I29V	exonic	ENSG00000204610	NA	nonsynonymous SNV	ENSG00000204610:ENST00000376688:exon1:c.A85G:p.I29V,ENSG00000204610:ENST00000376694:exon1:c.A85G:p.I29V	NA	NA	6p22.1	Score=821;Name=V$ATF_01	Name=TAF1	NA	NA	rs17194460	0.21	0.21	0.177	0.238618	0.2038	0.3929	0.1383	0.0787	0.4029	0.2	0.35	0.16	0.07	0.2135	0.35	0.35	T	0.0	B	0.001	B	0.293	N	1.000	P	0.56	N	2.28	T	-0.962	T	0.008	T	0.042	-0.361	2.296	0.228	-0.096	-0.785	0.908	-0.361285	NA	0.36	0.186047	0.093709	NA	0.275	NA	8.7299864
779	19	54782407	54782407	C	T	exonic	LILRB2	NA	nonsynonymous SNV	LILRB2:NM_001080978:exon7:c.G965A:p.R322H,LILRB2:NM_005874:exon7:c.G965A:p.R322H	exonic	ENSG00000131042	NA	nonsynonymous SNV	ENSG00000131042:ENST00000391746:exon6:c.G965A:p.R322H,ENSG00000131042:ENST00000434421:exon6:c.G617A:p.R206H,ENSG00000131042:ENST00000314446:exon7:c.G965A:p.R322H,ENSG00000131042:ENST00000391748:exon7:c.G965A:p.R322H,ENSG00000131042:ENST00000391749:exon7:c.G965A:p.R322H	NA	NA	19q13.42	NA	NA	NA	NA	rs1128646	0.36	0.36	0.374	0.322684	0.5716	0.0863	0.379	0.2451	0.3753	0.59	0.04	0.41	0.35	0.462	0.59	0.5	T	0.004	B	0.004	B	0.143	N	1.000	P	0.85	L	6.98	T	-0.958	T	0.000	T	0.11	-1.102	0.141	-3.77	-3.312	-1.838	1.212	-1.101637	NA	0.48	0.570116	0.387038	NA	0.406	NA	8.7296174
779	3	33255592	33255592	A	G	exonic	SUSD5	NA	nonsynonymous SNV	SUSD5:NM_015551:exon2:c.T118C:p.F40L	exonic	ENSG00000173705	NA	nonsynonymous SNV	ENSG00000173705:ENST00000309558:exon2:c.T118C:p.F40L	Score=449;Name=lod=89	NA	3p22.3	NA	NA	NA	NA	rs9637517	0.93	0.93	0.924	0.949681	0.8489	0.995	0.9265	0.9871	0.9724	0.84	1	0.92	0.98	0.899	1	1	T	0.0	B	0.0	B	0.002	N	1.000	P	-1.91	N	2.34	T	-0.972	T	0.000	T	0.201	0.173	4.929	5.03	1.122	1.621	8.062	0.172618	NA	1	0.855971	0.970573	NA	0.906	NA	8.7294624
779	17	33690466	33690466	C	A	exonic	SLFN11	NA	nonsynonymous SNV	SLFN11:NM_152270:exon2:c.G361T:p.V121F,SLFN11:NM_001104589:exon3:c.G361T:p.V121F,SLFN11:NM_001104587:exon4:c.G361T:p.V121F,SLFN11:NM_001104588:exon4:c.G361T:p.V121F,SLFN11:NM_001104590:exon4:c.G361T:p.V121F	exonic	ENSG00000172716	NA	nonsynonymous SNV	ENSG00000172716:ENST00000308377:exon2:c.G361T:p.V121F,ENSG00000172716:ENST00000591682:exon3:c.G361T:p.V121F,ENSG00000172716:ENST00000394566:exon4:c.G361T:p.V121F	NA	NA	17q12	NA	NA	NA	NA	rs12453150	0.45	0.45	0.424	0.416134	0.5547	0.4821	0.5202	0.1543	0.4857	0.56	0.5	0.51	0.15	0.5002	0.56	0.77	T	0.001	B	0.002	B	0.006	N	1.000	P	0.46	N	4.52	T	-0.923	T	0.000	T	0.029	0.538	6.914	-8.36	-3.775	-1.838	1.513	0.538262	NA	0.18	0.549419	0.230368	NA	0.377	NA	8.7290144
779	16	11773662	11773662	C	G	exonic	TXNDC11	NA	nonsynonymous SNV	TXNDC11:NM_015914:exon12:c.G2266C:p.V756L	exonic	ENSG00000153066	NA	nonsynonymous SNV	ENSG00000153066:ENST00000283033:exon12:c.G2266C:p.V756L,ENSG00000153066:ENST00000356957:exon13:c.G2347C:p.V783L	Score=462;Name=lod=101	NA	16p13.13	NA	NA	NA	NA	rs3190321	0.46	0.46	0.488	0.451877	0.5557	0.4345	0.3285	0.4342	0.4744	0.56	0.45	0.34	0.41	0.5081	0.56	0.86	T	0.0	B	0.001	B	0.005	N	1.000	P	-0.895	N	2.95	T	-0.960	T	0.000	T	0.04	-0.48	1.789	3.63	0.850	1.521	9.102	-0.480073	NA	1	0.541977	0.435594	NA	0.377	NA	8.7275564
779	4	123664446	123664446	G	A	exonic	BBS12	NA	nonsynonymous SNV	BBS12:NM_152618:exon2:c.G1399A:p.D467N,BBS12:NM_001178007:exon3:c.G1399A:p.D467N	exonic	ENSG00000181004	NA	nonsynonymous SNV	ENSG00000181004:ENST00000314218:exon2:c.G1399A:p.D467N,ENSG00000181004:ENST00000542236:exon3:c.G1399A:p.D467N	NA	NA	4q27	NA	Name=GATA-2	Name=4	NA	rs13135778	0.11	0.11	0.1	0.0926518	0.2127	NA	0.1052	0.0514	0.1115	0.22	NA	0.12	0.07	0.1696	0.23	0.8	T	0.0	B	0.0	B	0.418	N	1.000	P	-1.59	N	-1.16	T	-1.091	T	0.000	T	0.01	-1.553	0.015	1.9	-0.117	0.602	9.602	-1.552873	NA	1	0.225698	0.068997	NA	0.116	NA	8.7253354
779	2	69049939	69049939	G	T	exonic	ARHGAP25	NA	nonsynonymous SNV	ARHGAP25:NM_001166276:exon9:c.G1647T:p.R549S,ARHGAP25:NM_001166277:exon9:c.G1548T:p.R516S,ARHGAP25:NM_014882:exon9:c.G1644T:p.R548S,ARHGAP25:NM_001007231:exon10:c.G1668T:p.R556S	exonic	ENSG00000163219	NA	nonsynonymous SNV	ENSG00000163219:ENST00000479844:exon4:c.G747T:p.R249S,ENSG00000163219:ENST00000409030:exon9:c.G1644T:p.R548S,ENSG00000163219:ENST00000409220:exon9:c.G1647T:p.R549S,ENSG00000163219:ENST00000467265:exon9:c.G1548T:p.R516S,ENSG00000163219:ENST00000295381:exon10:c.G1665T:p.R555S,ENSG00000163219:ENST00000409202:exon10:c.G1668T:p.R556S	Score=325;Name=lod=28	NA	2p13.3	NA	NA	NA	NA	rs4241344	0.25	0.25	0.246	0.265974	0.1869	0.4435	0.3156	0.1725	0.2556	0.19	0.39	0.3	0.16	0.23	0.39	0.85	T	0.001	B	0.001	B	0.346	N	0.024	P	0	N	3.05	T	-0.936	T	0.000	T	0.267	-0.244	2.826	3.55	0.698	0.193	1.924	-0.243736	NA	0.5	0.191163	0.172116	NA	0.174	NA	8.7252704
780	6	146755324	146755324	T	C	exonic	GRM1	NA	nonsynonymous SNV	GRM1:NM_000838:exon9:c.T2977C:p.S993P	exonic	ENSG00000152822	NA	nonsynonymous SNV	ENSG00000152822:ENST00000282753:exon8:c.T2977C:p.S993P,ENSG00000152822:ENST00000361719:exon9:c.T2977C:p.S993P	NA	NA	6q24.3	NA	NA	NA	NA	rs6923492	0.57	0.57	0.548	0.604034	0.5457	0.5466	0.4726	0.7421	0.6299	0.54	0.53	0.48	0.72	0.5311	0.72	1	T	0.0	B	0.0	B	0.146	N	1.000	P	-0.695	N	-2.36	D	-1.044	T	0.136	T	0.016	-0.518	1.636	3.42	0.607	0.444	8.553	-0.517781	NA	0.73	0.532674	0.710168	NA	0.558	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117205.2;CLNDSDB=.;CLNDSDBID=.	8.7238594
780	3	57108101	57108101	C	T	exonic	SPATA12	NA	nonsynonymous SNV	SPATA12:NM_181727:exon2:c.C379T:p.P127S	exonic	ENSG00000186451	NA	nonsynonymous SNV	ENSG00000186451:ENST00000334325:exon2:c.C379T:p.P127S	NA	NA	3p14.3	NA	NA	NA	NA	rs76587478	0.02	0.02	0.019	0.0201677	0.0427	0.0069	0.0231	0.0008	0.0348	0.04	0.01	0.02	0.002	0.0293	0.04	0	D	0.458	P	0.224	B	.	.	1.000	N	0	N	.	.	-1.039	T	0.009	T	0.053	1.156	9.706	-0.77	-0.195	0.067	3.159	1.15588	NA	NA	0.038837	0.007944	NA	0.022	NA	8.7224964
780	3	133666209	133666209	C	T	exonic	SLCO2A1	NA	nonsynonymous SNV	SLCO2A1:NM_005630:exon9:c.G1186A:p.A396T	exonic	ENSG00000174640	NA	nonsynonymous SNV	ENSG00000174640:ENST00000493729:exon8:c.G958A:p.A320T,ENSG00000174640:ENST00000310926:exon9:c.G1186A:p.A396T	Score=472;Name=lod=110	NA	3q22.1	NA	NA	NA	NA	rs34550074	0.28	0.28	0.281	0.283746	0.1899	0.2817	0.2536	0.4297	0.2065	0.21	0.27	0.26	0.41	0.2341	0.41	0.43	T	0.001	B	0.004	B	0.004	N	0.999	P	-0.385	N	1.09	T	-0.911	T	0.000	T	0.063	-0.6	1.317	4.55	0.437	0.518	8.120	-0.600463	NA	0.72	0.186977	0.410123	ID=COSM149474;OCCURENCE=1(stomach)	0.196	NA	8.7223564
780	20	62595990	62595990	T	C	exonic	ZNF512B	NA	nonsynonymous SNV	ZNF512B:NM_020713:exon6:c.A1114G:p.M372V	exonic	ENSG00000196700	NA	nonsynonymous SNV	ENSG00000196700:ENST00000217130:exon6:c.A1114G:p.M372V,ENSG00000196700:ENST00000369888:exon6:c.A1114G:p.M372V,ENSG00000196700:ENST00000450537:exon6:c.A1114G:p.M372V	NA	NA	20q13.33	NA	NA	NA	NA	rs817326	0.12	0.12	0.111	0.0944489	0.2207	0.0149	0.1225	0.056	0.0787	0.22	0.02	0.14	0.06	0.1803	0.22	0.72	T	0.0	B	0.0	B	0.867	N	1.000	P	0.69	N	2.03	T	-1.010	T	0.000	T	0.035	-0.416	2.059	-11.0	-2.664	-2.146	8.236	-0.415806	NA	0.25	0.21093	0.090104	ID=COSM329638;OCCURENCE=1(breast),1(haematopoietic_and_lymphoid_tissue),1(large_intestine)	0.094	NA	8.7214034
780	14	50704435	50704435	G	A	intergenic	SOS2,L2HGDH	dist=6336;dist=4717	NA	NA	exonic	ENSG00000087299	NA	nonsynonymous SNV	ENSG00000087299:ENST00000261699:exon10:c.C1205T:p.A402V	NA	NA	14q21.3	NA	NA	Name=10	NA	rs80325445	0.02	0.02	0.013	0.0123802	0.0398	NA	0.0159	0.0015	0.0092	0.04	NA	0.01	0.002	0.0341	0.041	0.11	T	0.001	B	0.005	B	.	.	1.000	N	.	.	-3.16	D	-0.463	T	0.301	T	0.102	2.465	14.2	2.89	0.712	0.434	5.756	2.464862	2.464862	0.19	0.040934	0.005708	NA	NA	NA	8.7184994
780	21	43531808	43531808	A	C	exonic	UMODL1	NA	nonsynonymous SNV	UMODL1:NM_001199527:exon11:c.A2260C:p.T754P,UMODL1:NM_173568:exon11:c.A2476C:p.T826P,UMODL1:NM_001004416:exon12:c.A2092C:p.T698P,UMODL1:NM_001199528:exon12:c.A1876C:p.T626P	exonic	ENSG00000177398	NA	nonsynonymous SNV	ENSG00000177398:ENST00000400427:exon11:c.A2260C:p.T754P,ENSG00000177398:ENST00000408989:exon11:c.A2476C:p.T826P,ENSG00000177398:ENST00000400424:exon12:c.A1876C:p.T626P,ENSG00000177398:ENST00000408910:exon12:c.A2092C:p.T698P	NA	NA	21q22.3	Score=772;Name=V$SEF1_C	NA	NA	NA	rs220130	0.2	0.2	0.192	0.196685	0.2187	0.1994	0.232	0.177	0.1728	0.2	0.21	0.21	0.17	0.1993	0.21	0.07	T	0.001	B	0.003	B	0.462	N	1.000	P	0.805	L	0.41	T	-1.031	T	0.000	T	0.053	0.994	9.058	-7.2	-0.817	-0.755	11.169	0.993873	NA	0.04	0.196861	0.170455	NA	0.167	NA	8.7184724
780	19	39322087	39322087	T	G	exonic	ECH1	NA	nonsynonymous SNV	ECH1:NM_001398:exon2:c.A122C:p.E41A	exonic	ENSG00000104823,ENSG00000268083	NA	nonsynonymous SNV	ENSG00000104823:ENST00000221418:exon2:c.A122C:p.E41A,ENSG00000104823:ENST00000595470:exon2:c.A122C:p.E41A	NA	NA	19q13.2	NA	Name=p300,ELF1_(SC-631),Pol2,GATA3_(SC-268),GABP,TBP,ZNF263,Pbx3,FOXA1_(C-20)	Name=137	NA	rs9419	0.4	0.4	0.372	0.365016	0.5915	0.244	0.4207	0.2035	0.4356	0.6	0.3	0.43	0.19	0.4727	0.6	0.67	T	0.029	B	0.008	B	0.848	U	1.000	P	0.55	N	-0.03	T	-0.928	T	0.000	T	0.098	1.675	11.56	2.94	0.799	0.652	5.329	1.675316	1.675316	0.36	0.551744	0.254199	NA	0.435	NA	8.7173894
780	1	207753621	207753621	A	G	exonic	CR1	NA	nonsynonymous SNV	CR1:NM_000573:exon22:c.A3623G:p.H1208R,CR1:NM_000651:exon30:c.A4973G:p.H1658R	exonic	ENSG00000203710	NA	nonsynonymous SNV	ENSG00000203710:ENST00000534202:exon14:c.A2273G:p.H758R,ENSG00000203710:ENST00000367051:exon22:c.A3623G:p.H1208R,ENSG00000203710:ENST00000367052:exon22:c.A3623G:p.H1208R,ENSG00000203710:ENST00000367053:exon22:c.A3623G:p.H1208R,ENSG00000203710:ENST00000400960:exon22:c.A3623G:p.H1208R,ENSG00000203710:ENST00000367049:exon30:c.A4973G:p.H1658R	NA	NA	1q32.2	NA	NA	NA	NA	rs2274567	0.22	0.22	0.186	0.294329	0.1819	0.3274	0.2709	0.2186	0.4949	0.17	0.23	0.3	0.23	0.251	0.3	0.35	T	0.995	D	0.984	D	.	.	1.000	P	0.51	N	-0.03	T	-1.065	T	0.000	T	0.069	-0.892	0.454	0.182	0.164	0.814	1.201	-0.89216	NA	0.42	0.183349	0.222987	NA	0.21	NA	8.7170844
780	8	110302047	110302047	T	G	exonic	NUDCD1	NA	nonsynonymous SNV	NUDCD1:NM_001128211:exon5:c.A669C:p.L223F,NUDCD1:NM_032869:exon5:c.A756C:p.L252F	exonic	ENSG00000120526	NA	nonsynonymous SNV	ENSG00000120526:ENST00000239690:exon5:c.A756C:p.L252F,ENSG00000120526:ENST00000427660:exon5:c.A669C:p.L223F	Score=448;Name=lod=88	NA	8q23.1	NA	NA	NA	NA	rs2980619	0.62	0.62	0.626	0.671126	0.4841	0.5218	0.6888	0.8941	0.7035	0.49	0.55	0.68	0.86	0.5926	0.86	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-2.36	N	2.33	T	-0.988	T	0.000	T	0.09	-1.392	0.024	3.81	0.293	2.429	7.738	-1.391632	NA	1	0.541395	0.839764	NA	0.587	NA	8.7152384
781	2	27460968	27460968	A	G	exonic	CAD	NA	synonymous SNV	CAD:NM_004341:exon30:c.A4773G:p.A1591A	exonic	ENSG00000084774	NA	synonymous SNV	ENSG00000084774:ENST00000403525:exon29:c.A4584G:p.A1528A,ENSG00000084774:ENST00000264705:exon30:c.A4773G:p.A1591A	NA	NA	2p23.3	NA	NA	NA	NA	rs1141313	0.38	0.38	0.378	0.454673	0.2883	0.1488	0.4683	0.8374	0.4141	0.28	0.11	0.42	0.81	0.3653	0.81	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.028	T	0.000	T	.	-0.728	0.885	-9.6	-2.338	-4.974	2.917	-0.72754	NA	NA	0.29814	0.746028	NA	0.522	NA	8.7149266
781	18	31324934	31324934	A	G	exonic	ASXL3	NA	nonsynonymous SNV	ASXL3:NM_030632:exon12:c.A5122G:p.M1708V	exonic	ENSG00000141431	NA	nonsynonymous SNV	ENSG00000141431:ENST00000269197:exon12:c.A5122G:p.M1708V	NA	NA	18q12.1	NA	NA	NA	NA	rs7232237	0.68	0.68	0.663	0.679113	0.5189	0.8988	0.6816	0.7352	0.5399	0.51	0.9	0.64	0.72	0.5863	0.9	0.62	T	0.0	B	0.0	B	.	.	1.000	P	-0.205	N	2.68	T	-1.037	T	0.000	T	0.021	-2.951	0.001	-7.36	-1.640	-1.434	3.295	-2.950943	NA	0	0.513417	0.737838	NA	0.681	NA	8.7147164
781	21	28302355	28302355	A	G	exonic	ADAMTS5	NA	nonsynonymous SNV	ADAMTS5:NM_007038:exon7:c.T2075C:p.L692P	exonic	ENSG00000154736	NA	nonsynonymous SNV	ENSG00000154736:ENST00000284987:exon7:c.T2075C:p.L692P	Score=295;Name=lod=21	NA	21q21.3	NA	NA	NA	NA	rs226794	0.78	0.78	0.802	0.809704	0.8867	0.498	0.732	0.9803	0.8763	0.88	0.49	0.74	0.98	0.8402	0.98	1	T	0.0	B	0.0	B	0.000	N	0.001	P	-1.775	N	0.97	T	-0.936	T	0.000	T	0.153	-0.368	2.268	5.97	1.555	7.315	15.465	-0.367581	NA	NA	0.89186	0.959374	NA	0.877	NA	8.7145734
781	16	1129872	1129872	C	T	exonic	SSTR5	NA	nonsynonymous SNV	SSTR5:NM_001053:exon1:c.C1004T:p.P335L,SSTR5:NM_001172560:exon2:c.C1004T:p.P335L	exonic	ENSG00000162009	NA	nonsynonymous SNV	ENSG00000162009:ENST00000293897:exon1:c.C1004T:p.P335L,ENSG00000162009:ENST00000397547:exon2:c.C1004T:p.P335L	NA	NA	16p13.3	Score=864;Name=V$ZID_01	NA	NA	NA	rs169068	0.56	0.56	0.527	0.518171	0.5427	0.8085	0.5562	0.3366	0.4121	0.55	0.81	0.54	0.3	0.5386	0.81	0.37	T	0.055	B	0.011	B	0.234	N	1.000	P	2.015	M	-0.59	T	-0.970	T	0.000	T	0.06	-0.133	3.347	2.24	0.883	0.488	6.593	-0.133417	NA	0.31	0.539152	0.383081	NA	0.58	NA	8.7128814
781	8	28206275	28206275	G	C	exonic	ZNF395	NA	synonymous SNV	ZNF395:NM_018660:exon10:c.C1503G:p.A501A	exonic	ENSG00000186918	NA	synonymous SNV	ENSG00000186918:ENST00000344423:exon10:c.C1503G:p.A501A,ENSG00000186918:ENST00000523095:exon10:c.C1503G:p.A501A,ENSG00000186918:ENST00000523202:exon10:c.C1503G:p.A501A	Score=582;Name=lod=309	NA	8p21.1	Score=806;Name=V$PAX5_01	Name=Pol2,TAF1,Pol2-4H8,NFKB	NA	Score=84;Name=2293892_0_-_84	rs1046511	0.32	0.32	0.283	0.315096	0.3191	0.3879	0.4928	0.1467	0.3374	0.32	0.38	0.48	0.14	0.3257	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.785055	1.785055	NA	0.311163	0.179301	NA	0.181	NA	8.7107036
781	9	132662786	132662786	C	T	exonic	FNBP1	NA	nonsynonymous SNV	FNBP1:NM_015033:exon14:c.G1469A:p.S490N	exonic	ENSG00000187239	NA	nonsynonymous SNV	ENSG00000187239:ENST00000443566:exon5:c.G353A:p.S118N,ENSG00000187239:ENST00000355681:exon14:c.G1382A:p.S461N,ENSG00000187239:ENST00000420781:exon14:c.G1442A:p.S481N,ENSG00000187239:ENST00000446176:exon14:c.G1469A:p.S490N	NA	NA	9q34.11	Score=813;Name=V$PAX4_01	Name=Pol2-4H8	NA	NA	rs1023000	0.61	0.61	0.597	0.634784	0.507	0.7927	0.6527	0.5787	0.6667	0.49	0.76	0.6	0.63	0.5926	0.76	0.12	T	0.0	B	0.012	B	0.497	N	1.000	P	0.715	N	-0.77	T	-0.917	T	0.000	T	0.063	-0.826	0.609	2.15	0.131	0.438	5.586	-0.825795	NA	0.18	0.524199	0.591507	ID=COSM455470;OCCURENCE=2(breast)	0.696	NA	8.7095344
781	19	53856349	53856349	A	T	exonic	ZNF845	NA	nonsynonymous SNV	ZNF845:NM_138374:exon4:c.A2421T:p.E807D	exonic	ENSG00000213799	NA	nonsynonymous SNV	ENSG00000213799:ENST00000458035:exon4:c.A2421T:p.E807D,ENSG00000213799:ENST00000595091:exon5:c.A2421T:p.E807D	NA	NA	19q13.42	NA	NA	NA	NA	rs55874600	0.22	0.22	0.207	0.203874	0.3946	0.1052	0.2421	0.0431	0.2996	0.41	0.08	0.25	0.05	0.3233	0.41	0.18	T	0.563	P	0.407	B	.	.	1.000	P	0.505	N	0.99	T	-0.961	T	0.000	T	0.026	0.779	8.112	-4.2	-0.620	-6.159	4.309	0.779021	NA	0.1	0.408234	0.087428	NA	0.246	NA	8.7071994
781	16	74808425	74808425	G	A	exonic	FA2H	NA	synonymous SNV	FA2H:NM_024306:exon1:c.C229T:p.L77L	exonic	ENSG00000103089	NA	synonymous SNV	ENSG00000103089:ENST00000219368:exon1:c.C229T:p.L77L,ENSG00000103089:ENST00000567683:exon1:c.C229T:p.L77L	Score=608;Name=lod=396	NA	16q23.1	Score=895;Name=V$CP2_01	Name=BAF155,Ini1	NA	NA	rs929881	0.26	0.26	0.271	0.249002	0.3151	0.0377	0.2046	0.447	0.1626	0.31	0.03	0.23	0.47	0.3587	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.522503	NA	NA	0.286069	0.39158	NA	0.159	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117009.1;CLNDSDB=.;CLNDSDBID=.	8.7067976
781	3	97887985	97887985	T	A	exonic	OR5H15	NA	nonsynonymous SNV	OR5H15:NM_001005515:exon1:c.T442A:p.S148T	exonic	ENSG00000233412	NA	nonsynonymous SNV	ENSG00000233412:ENST00000356526:exon1:c.T442A:p.S148T	NA	NA	3q11.2	NA	NA	NA	NA	rs4133321	0.57	0.57	0.576	0.566693	0.5338	0.5079	0.5663	0.6354	0.5685	0.54	0.56	0.52	0.64	0.5528	0.64	0.25	T	0.156	B	0.1	B	0.001	N	1.000	P	1.99	M	1.17	T	-0.956	T	0.000	T	0.107	1.445	10.77	2.48	1.138	-0.728	5.606	1.445313	1.445313	0.17	0.540493	0.61734	NA	0.399	NA	8.7062404
782	3	158366900	158366900	G	A	exonic	GFM1	NA	nonsynonymous SNV	GFM1:NM_024996:exon5:c.G643A:p.V215I	exonic	ENSG00000168827	NA	nonsynonymous SNV	ENSG00000168827:ENST00000264263:exon5:c.G643A:p.V215I,ENSG00000168827:ENST00000478254:exon5:c.G643A:p.V215I,ENSG00000168827:ENST00000478576:exon5:c.G643A:p.V215I,ENSG00000168827:ENST00000486715:exon5:c.G643A:p.V215I	Score=397;Name=lod=55	NA	3q25.32	NA	NA	NA	NA	rs2303909	0.55	0.55	0.548	0.583267	0.5437	0.3849	0.5303	0.7708	0.6125	0.56	0.38	0.53	0.76	0.5467	0.76	0.95	T	0.006	B	0.074	B	0.000	N	0.000	P	0.67	N	-0.77	T	-0.935	T	0.000	T	0.074	1.614	11.36	3.69	0.188	3.315	9.723	1.614309	1.614309	0.42	0.538837	0.714707	NA	0.558	NA	8.7040964
782	1	21798249	21798249	C	G	exonic	NBPF3	NA	nonsynonymous SNV	NBPF3:NM_001256417:exon4:c.C424G:p.Q142E,NBPF3:NM_001256416:exon5:c.C634G:p.Q212E,NBPF3:NM_032264:exon5:c.C634G:p.Q212E	exonic	ENSG00000142794	NA	nonsynonymous SNV	ENSG00000142794:ENST00000454000:exon4:c.C424G:p.Q142E,ENSG00000142794:ENST00000318249:exon5:c.C634G:p.Q212E,ENSG00000142794:ENST00000342104:exon5:c.C634G:p.Q212E,ENSG00000142794:ENST00000318220:exon8:c.C466G:p.Q156E,ENSG00000142794:ENST00000434838:exon9:c.C466G:p.Q156E	NA	NA	1p36.12	NA	NA	NA	NA	rs72872297	0.05	0.05	0.042	0.0429313	0.0388	NA	0.0331	0.0983	0.0235	0.05	NA	0.04	0.1	0.0431	0.1	1	T	0.7	P	0.357	B	.	.	1.000	N	0.35	N	4.46	T	-1.117	T	0.002	T	0.301	-2.287	0.004	-2.46	-0.901	-0.482	2.792	-2.287241	NA	0.43	0.05	0.097821	NA	0.065	NA	8.7014334
782	2	49191041	49191041	C	T	exonic	FSHR	NA	nonsynonymous SNV	FSHR:NM_181446:exon9:c.G841A:p.A281T,FSHR:NM_000145:exon10:c.G919A:p.A307T	exonic	ENSG00000170820	NA	nonsynonymous SNV	ENSG00000170820:ENST00000541117:exon7:c.G127A:p.A43T,ENSG00000170820:ENST00000304421:exon9:c.G841A:p.A281T,ENSG00000170820:ENST00000346173:exon9:c.G733A:p.A245T,ENSG00000170820:ENST00000454032:exon9:c.G733A:p.A245T,ENSG00000170820:ENST00000406846:exon10:c.G919A:p.A307T	NA	NA	2p16.3	Score=825;Name=V$BACH1_01	NA	Name=7	NA	rs6165	0.51	0.51	0.484	0.492212	0.5487	0.6597	0.5793	0.2375	0.544	0.54	0.67	0.58	0.24	0.5446	0.67	.	.	0.002	B	0.006	B	0.929	N	1.000	P	1.5	L	-0.06	T	-0.926	T	0.000	T	0.266	0.209	5.128	1.76	0.150	-0.110	4.468	0.209238	NA	0.42	0.541512	0.285066	NA	0.478	CLINSIG=drug-response;CLNDBN=Ovarian_response_to_FSH_stimulation;CLNREVSTAT=single;CLNACC=RCV000017633.1;CLNDSDB=MedGen;CLNDSDBID=C1848715	8.6985214
782	5	172662024	172662024	T	C	exonic	NKX2-5	NA	synonymous SNV	NKX2-5:NM_001166175:exon1:c.A63G:p.E21E,NKX2-5:NM_001166176:exon1:c.A63G:p.E21E,NKX2-5:NM_004387:exon1:c.A63G:p.E21E	exonic	ENSG00000183072	NA	synonymous SNV	ENSG00000183072:ENST00000329198:exon1:c.A63G:p.E21E,ENSG00000183072:ENST00000424406:exon1:c.A63G:p.E21E,ENSG00000183072:ENST00000517440:exon1:c.A63G:p.E21E,ENSG00000183072:ENST00000521848:exon1:c.A63G:p.E21E	Score=604;Name=lod=380	NA	5q35.1	NA	Name=SUZ12,TAF1,Pol2,Egr-1	Name=23	NA	rs2277923	0.51	0.51	0.46	0.535743	0.2823	0.6339	0.5058	0.7254	0.4601	0.29	0.67	0.43	0.72	0.4052	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.103567	NA	NA	0.281346	0.644501	NA	0.536	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=mult|single;CLNACC=RCV000037967.2|RCV000127214.1;CLNDSDB=.|.;CLNDSDBID=.|.	8.6978206
782	6	31118511	31118511	T	G	exonic	CCHCR1	NA	nonsynonymous SNV	CCHCR1:NM_001105563:exon6:c.A984C:p.E328D,CCHCR1:NM_001105564:exon6:c.A1092C:p.E364D,CCHCR1:NM_019052:exon6:c.A825C:p.E275D	exonic	ENSG00000204536	NA	nonsynonymous SNV	ENSG00000204536:ENST00000376266:exon6:c.A825C:p.E275D,ENSG00000204536:ENST00000396263:exon6:c.A825C:p.E275D,ENSG00000204536:ENST00000396268:exon6:c.A1092C:p.E364D,ENSG00000204536:ENST00000451521:exon6:c.A984C:p.E328D	Score=317;Name=lod=26	Name=Prostate cancer	6p21.33	NA	NA	NA	NA	rs130067	0.24	0.24	0.209	0.254992	0.2087	0.3462	0.3329	0.1899	0.2413	0.21	0.29	0.31	0.19	0.2299	0.31	0.33	T	0.003	B	0.009	B	0.805	N	1.000	P	0.6	N	3.97	T	-0.901	T	0.002	T	0.127	0.669	7.582	-1.08	-0.132	-0.444	0.579	0.66893	NA	0.35	0.197305	0.191926	NA	0.217	NA	8.6974284
782	19	37118439	37118439	C	T	exonic	ZNF382	NA	nonsynonymous SNV	ZNF382:NM_001256838:exon5:c.C1637T:p.T546M,ZNF382:NM_032825:exon5:c.C1640T:p.T547M	exonic	ENSG00000161298	NA	nonsynonymous SNV	ENSG00000161298:ENST00000435416:exon3:c.C1637T:p.T546M,ENSG00000161298:ENST00000423582:exon4:c.C1493T:p.T498M,ENSG00000161298:ENST00000292928:exon5:c.C1640T:p.T547M,ENSG00000161298:ENST00000439428:exon5:c.C1637T:p.T546M	NA	NA	19q13.12	NA	Name=SETDB1	NA	NA	rs61732180	0.15	0.15	0.136	0.130591	0.2346	0.1438	0.1196	0.0106	0.18	0.24	0.15	0.13	0.02	0.1852	0.24	0.05	D	0.0	B	0.0	B	0.411	N	1.000	P	1.065	L	3.46	T	-0.927	T	0.000	T	0.072	-0.181	3.121	1.99	0.218	0.770	5.496	-0.180615	NA	0.38	0.217674	0.038811	NA	0.174	NA	8.6958594
783	14	93118038	93118038	A	G	exonic	RIN3	NA	nonsynonymous SNV	RIN3:NM_024832:exon6:c.A644G:p.H215R	exonic	ENSG00000100599	NA	nonsynonymous SNV	ENSG00000100599:ENST00000216487:exon6:c.A644G:p.H215R	NA	NA	14q32.12	NA	Name=EBF,Pol2-4H8,PAX5-C20,PAX5-N19,BCL3,NFKB,TCF12,POU2F2,IRF4_(M-17),YY1_(C-20),BCL11A,Pol2,SP1,Oct-2,BATF,EBF1_(C-8)	Name=19	NA	rs3829947	0.43	0.43	0.46	0.442492	0.5815	0.2748	0.451	0.4561	0.4479	0.56	0.24	0.45	0.45	0.4877	0.57	0.83	T	0.0	B	0.001	B	0.120	N	0.414	P	0.145	N	1.98	T	-0.936	T	0.000	T	0.016	2.642	14.79	-5.52	-0.914	-0.197	2.511	2.642037	2.642037	0.31	0.57	0.456423	NA	0.268	NA	8.6941334
783	4	187629538	187629538	C	T	exonic	FAT1	NA	nonsynonymous SNV	FAT1:NM_005245:exon2:c.G1444A:p.V482I	exonic	ENSG00000083857	NA	nonsynonymous SNV	ENSG00000083857:ENST00000441802:exon2:c.G1444A:p.V482I,ENSG00000083857:ENST00000509647:exon2:c.G1444A:p.V482I	Score=265;Name=lod=16	NA	4q35.2	NA	NA	NA	NA	rs3733413	0.36	0.36	0.338	0.338858	0.5765	0.1399	0.4798	0.1581	0.4438	0.57	0.13	0.53	0.19	0.4865	0.58	0.32	T	0.059	B	0.09	B	0.000	N	0.000	P	1.82	L	0.44	T	-0.917	T	0.000	T	0.129	1.861	12.18	2.77	0.872	3.947	11.119	1.860644	1.860644	0.04	0.577236	0.222086	NA	0.326	NA	8.6930974
783	1	152283862	152283862	G	C	exonic	FLG	NA	nonsynonymous SNV	FLG:NM_002016:exon3:c.C3500G:p.A1167G	exonic	ENSG00000143631	NA	nonsynonymous SNV	ENSG00000143631:ENST00000368799:exon3:c.C3500G:p.A1167G	NA	NA	1q21.3	NA	NA	NA	NA	rs58001094	0.37	0.37	0.342	0.534145	0.1759	0.6577	0.4611	0.7806	0.4939	0.15	0.55	0.34	0.53	0.304	0.6	0.41	T	0.011	B	0.005	B	.	.	1.000	P	-2.42	N	3.76	T	-0.905	T	0.001	T	0.018	-0.205	3.006	-5.53	-1.865	.	10.778	-0.204867	NA	1	0.16186	0.599637	ID=COSM1600315;OCCURENCE=1(central_nervous_system)	0.406	NA	8.6915734
783	8	18729818	18729818	T	G	exonic	PSD3	NA	nonsynonymous SNV	PSD3:NM_015310:exon3:c.A556C:p.T186P	exonic	ENSG00000156011	NA	nonsynonymous SNV	ENSG00000156011:ENST00000523619:exon2:c.A361C:p.T121P,ENSG00000156011:ENST00000327040:exon3:c.A556C:p.T186P,ENSG00000156011:ENST00000440756:exon3:c.A556C:p.T186P	NA	NA	8p22	NA	Name=CTCF	NA	NA	rs7003060	0.67	0.67	0.25	0.855631	0.671	0.9782	0.8012	0.9365	0.8487	0.53	0.83	0.66	0.7	0.756	0.83	0.33	T	0.0	B	0.0	B	0.000	N	1.000	P	-0.205	N	1.47	T	-0.981	T	0.000	T	0.053	0.259	5.401	-3.96	-1.736	-0.072	1.042	0.259169	NA	0.08	0.215681	0.344828	NA	NA	NA	8.6906524
783	17	6716242	6716242	G	A	exonic	TEKT1	NA	nonsynonymous SNV	TEKT1:NM_053285:exon6:c.C760T:p.R254C	exonic	ENSG00000167858	NA	nonsynonymous SNV	ENSG00000167858:ENST00000571744:exon1:c.C94T:p.R32C,ENSG00000167858:ENST00000535086:exon5:c.C322T:p.R108C,ENSG00000167858:ENST00000338694:exon6:c.C760T:p.R254C	Score=366;Name=lod=41	NA	17p13.1	NA	NA	NA	NA	rs3744395	0.25	0.25	0.228	0.246406	0.2087	0.4365	0.2853	0.1006	0.2587	0.2	0.47	0.23	0.08	0.2285	0.47	0.12	T	0.037	B	0.035	B	0.013	N	0.002	P	1.34	L	4.08	T	-0.939	T	0.000	T	0.401	1.372	10.51	0.207	-0.088	1.082	4.477	1.371713	1.371713	0.12	0.206977	0.122787	NA	0.246	NA	8.6891564
783	11	119052826	119052826	C	A	exonic	NLRX1	NA	nonsynonymous SNV	NLRX1:NM_024618:exon9:c.C2378A:p.A793E,NLRX1:NM_170722:exon9:c.C2378A:p.A793E	exonic	ENSG00000160703	NA	nonsynonymous SNV	ENSG00000160703:ENST00000525863:exon8:c.C2378A:p.A793E,ENSG00000160703:ENST00000292199:exon9:c.C2378A:p.A793E,ENSG00000160703:ENST00000409109:exon9:c.C2378A:p.A793E,ENSG00000160703:ENST00000409265:exon9:c.C2378A:p.A793E,ENSG00000160703:ENST00000409991:exon9:c.C2378A:p.A793E	NA	NA	11q23.3	Score=886;Name=V$E47_01	NA	NA	NA	rs4245191	0.65	0.65	0.669	0.688299	0.5477	0.8839	0.4179	0.708	0.7965	0.54	0.87	0.46	0.71	0.5754	0.87	1	T	0.014	B	0.02	B	0.001	N	1.000	P	-0.41	N	0.7	T	-0.956	T	0.000	T	0.154	-2.092	0.006	2.91	0.628	2.559	6.556	-2.09184	NA	1	0.521187	0.675227	NA	0.79	NA	8.6890464
783	17	72862593	72862593	C	T	exonic	FDXR	NA	nonsynonymous SNV	FDXR:NM_001258016:exon3:c.G212A:p.R71Q,FDXR:NM_001258012:exon4:c.G497A:p.R166Q,FDXR:NM_001258014:exon4:c.G344A:p.R115Q,FDXR:NM_004110:exon4:c.G368A:p.R123Q,FDXR:NM_024417:exon4:c.G368A:p.R123Q,FDXR:NM_001258013:exon5:c.G461A:p.R154Q	exonic	ENSG00000161513	NA	nonsynonymous SNV	ENSG00000161513:ENST00000544854:exon3:c.G212A:p.R71Q,ENSG00000161513:ENST00000579893:exon3:c.G215A:p.R72Q,ENSG00000161513:ENST00000293195:exon4:c.G368A:p.R123Q,ENSG00000161513:ENST00000442102:exon4:c.G497A:p.R166Q,ENSG00000161513:ENST00000581219:exon4:c.G473A:p.R158Q,ENSG00000161513:ENST00000581530:exon4:c.G368A:p.R123Q,ENSG00000161513:ENST00000582944:exon4:c.G344A:p.R115Q,ENSG00000161513:ENST00000583917:exon4:c.G371A:p.R124Q,ENSG00000161513:ENST00000413947:exon5:c.G461A:p.R154Q,ENSG00000161513:ENST00000455107:exon5:c.G236A:p.R79Q	Score=484;Name=lod=124	NA	17q25.1	NA	NA	NA	NA	rs690514	0.21	0.21	0.176	0.185104	0.2147	0.378	0.1571	0.0333	0.181	0.22	0.39	0.16	0.03	0.2103	0.39	0.31	T	0.062	B	0.02	B	0.132	N	0.000	P	0.765	N	-0.38	T	-0.966	T	0.000	T	0.097	1.591	11.28	-1.99	-0.351	-1.415	11.045	1.591102	1.591102	0.24	0.2204	0.065138	ID=COSM1479985,COSM437343;OCCURENCE=2(breast)	0.167	NA	8.6879334
783	19	54973280	54973280	C	G	exonic	LENG9	NA	nonsynonymous SNV	LENG9:NM_198988:exon1:c.G1496C:p.R499P	exonic	ENSG00000182909	NA	nonsynonymous SNV	ENSG00000182909:ENST00000333834:exon1:c.G1496C:p.R499P	NA	NA	19q13.42	NA	Name=Pol2	NA	NA	rs10423424	0.56	0.56	0.59	0.579073	0.5626	0.3651	0.464	0.77	0.6401	0.56	0.35	0.53	0.83	0.5405	0.83	1	T	0.0	B	0.0	B	0.828	N	1.000	P	-1.79	N	1.19	T	-0.962	T	0.000	T	0.049	-0.795	0.689	3.9	0.581	1.083	8.380	-0.795374	NA	1	0.544566	0.744893	NA	0.42	NA	8.6856674
783	3	97868795	97868795	A	G	exonic	OR5H14	NA	nonsynonymous SNV	OR5H14:NM_001005514:exon1:c.A566G:p.Y189C	exonic	ENSG00000236032	NA	nonsynonymous SNV	ENSG00000236032:ENST00000437310:exon1:c.A566G:p.Y189C	Score=321;Name=lod=27	NA	3q11.2	NA	NA	NA	NA	rs4857076	0.61	0.61	0.644	0.631589	0.5348	0.5228	0.585	0.8601	0.5675	0.53	0.56	0.52	0.84	0.572	0.84	1	T	0.0	B	0.0	B	0.000	N	0.941	P	-3.695	N	10.23	T	-0.891	T	0.000	T	0.064	-1.206	0.069	2.49	0.372	3.742	7.342	-1.206011	NA	1	0.541201	0.810541	NA	0.543	NA	8.6853324
784	1	182551337	182551337	A	C	exonic	RNASEL	NA	nonsynonymous SNV	RNASEL:NM_021133:exon4:c.T1623G:p.D541E	exonic	ENSG00000135828	NA	nonsynonymous SNV	ENSG00000135828:ENST00000444138:exon3:c.T1623G:p.D541E,ENSG00000135828:ENST00000367559:exon4:c.T1623G:p.D541E,ENSG00000135828:ENST00000539397:exon4:c.T1623G:p.D541E	NA	NA	1q25.3	NA	NA	NA	NA	rs627928	0.52	0.52	0.507	0.479832	0.5686	0.7093	0.4424	0.2632	0.4714	0.58	0.71	0.48	0.25	0.538	0.71	1	T	0.0	B	0.0	B	0.473	N	1.000	P	0.565	N	2.06	T	-0.958	T	0.000	T	0.023	-0.787	0.711	-5.59	-1.577	-2.581	3.987	-0.786976	NA	1	0.545349	0.329324	NA	0.428	NA	8.6813844
784	8	125565328	125565328	T	C	exonic	MTSS1	NA	nonsynonymous SNV	MTSS1:NM_014751:exon14:c.A2173G:p.T725A	exonic	ENSG00000170873	NA	nonsynonymous SNV	ENSG00000170873:ENST00000395508:exon7:c.A1495G:p.T499A,ENSG00000170873:ENST00000431961:exon8:c.A1327G:p.T443A,ENSG00000170873:ENST00000524090:exon8:c.A1843G:p.T615A,ENSG00000170873:ENST00000354184:exon13:c.A1327G:p.T443A,ENSG00000170873:ENST00000378017:exon14:c.A2098G:p.T700A,ENSG00000170873:ENST00000518547:exon14:c.A2173G:p.T725A,ENSG00000170873:ENST00000325064:exon15:c.A2185G:p.T729A	NA	NA	8q24.13	Score=804;Name=V$OLF1_01	NA	NA	NA	rs3829037	0.19	0.19	0.186	0.161741	0.2366	0.1587	0.1066	0.1573	0.1329	0.25	0.14	0.14	0.18	0.1995	0.25	0.69	T	0.003	B	0.004	B	0.528	N	1.000	P	-0.35	N	0.95	T	-1.097	T	0.000	T	0.159	-0.899	0.441	-4.85	-0.882	0.096	19.568	-0.898591	NA	0.6	0.216047	0.149115	NA	0.094	NA	8.6811864
784	10	128019025	128019025	C	G	exonic	ADAM12	NA	nonsynonymous SNV	ADAM12:NM_003474:exon2:c.G142C:p.G48R,ADAM12:NM_021641:exon2:c.G142C:p.G48R	exonic	ENSG00000148848	NA	nonsynonymous SNV	ENSG00000148848:ENST00000368676:exon2:c.G142C:p.G48R,ENSG00000148848:ENST00000368679:exon2:c.G142C:p.G48R,ENSG00000148848:ENST00000448723:exon2:c.G142C:p.G48R	NA	NA	10q26.2	NA	NA	NA	NA	rs3740199	0.55	0.55	0.519	0.523363	0.5398	0.4772	0.5965	0.5802	0.4254	0.56	0.49	0.57	0.59	0.5504	0.59	0.4	T	0.0	B	0.0	B	0.530	N	1.000	P	0	N	4.87	T	-0.932	T	0.000	T	0.336	-0.793	0.695	-3.88	-1.216	-2.308	6.315	-0.793114	NA	0.68	0.563953	0.587608	ID=COSM1128108,COSM1128110,COSM1128109;OCCURENCE=1(prostate)	0.522	NA	8.6791804
784	1	153233510	153233510	A	G	exonic	LOR	NA	nonsynonymous SNV	LOR:NM_000427:exon2:c.A85G:p.S29G	exonic	ENSG00000203782	NA	nonsynonymous SNV	ENSG00000203782:ENST00000368742:exon2:c.A85G:p.S29G	NA	NA	1q21.3	NA	NA	NA	NA	rs6661601	0.22	0.22	0.105	0.182109	0.3419	0.0655	0.281	0.0908	0.1912	0.37	0.09	0.28	0.12	0.3123	0.37	0	D	0.0	B	0.001	B	0.794	N	1.000	P	-1.15	N	1.4	T	-0.949	T	0.010	T	0.223	-0.578	1.402	-4.02	-0.694	0.658	8.684	-0.577954	NA	NA	NA	NA	NA	0.138	NA	8.6791334
784	14	33293122	33293122	A	G	exonic	AKAP6	NA	nonsynonymous SNV	AKAP6:NM_004274:exon13:c.A6103G:p.N2035D	exonic	ENSG00000151320	NA	nonsynonymous SNV	ENSG00000151320:ENST00000280979:exon13:c.A6103G:p.N2035D	NA	NA	14q12	Score=907;Name=V$GATA1_04	NA	Name=11	NA	rs1051695	0.69	0.69	0.704	0.710264	0.5308	0.6716	0.6772	0.9145	0.682	0.53	0.73	0.67	0.91	0.5964	0.91	0.81	T	0.0	B	0.0	B	0.315	N	1.000	P	-1.7	N	3.55	T	-1.067	T	0.000	T	0.004	-1.134	0.115	2.16	-0.052	-0.005	5.709	-1.133739	NA	0.78	0.527209	0.858375	NA	0.63	NA	8.6789244
784	3	97983391	97983391	C	T	exonic	OR5H6	NA	nonsynonymous SNV	OR5H6:NM_001005479:exon1:c.C263T:p.S88L	exonic	ENSG00000230301	NA	nonsynonymous SNV	ENSG00000230301:ENST00000383696:exon1:c.C263T:p.S88L	NA	NA	3q11.2	NA	NA	NA	NA	rs2173236	NA	NA	0.567	0.380591	0.5636	0.1319	0.3559	0.4433	0.3814	NA	NA	NA	NA	0.4632	0.67	0.03	D	0.001	B	0.001	B	0.267	N	1.000	N	0.08	N	7.44	T	-0.954	T	0.000	T	0.037	0.818	8.291	-4.15	-1.226	0.046	6.419	0.817682	NA	0.1	0.629419	0.666818	NA	0.413	NA	8.6771144
785	1	229623338	229623338	T	C	exonic	NUP133	NA	nonsynonymous SNV	NUP133:NM_018230:exon10:c.A1217G:p.Q406R	exonic	ENSG00000069248	NA	nonsynonymous SNV	ENSG00000069248:ENST00000261396:exon10:c.A1217G:p.Q406R,ENSG00000069248:ENST00000366679:exon10:c.A1217G:p.Q406R,ENSG00000069248:ENST00000537506:exon11:c.A1169G:p.Q390R	NA	NA	1q42.13	NA	NA	NA	NA	rs1065674	0.28	0.28	0.268	0.303315	0.2097	0.1607	0.3271	0.5802	0.1554	0.21	0.14	0.28	0.56	0.2336	0.56	1	T	0.0	B	0.0	B	0.000	N	0.884	P	-1.05	N	1.3	T	-0.903	T	0.000	T	0.048	-1.506	0.017	2.2	0.029	1.748	9.323	-1.505721	NA	1	0.216628	0.526782	NA	0.283	NA	8.6734054
785	14	36153177	36153177	T	C	exonic	RALGAPA1	NA	nonsynonymous SNV	RALGAPA1:NM_014990:exon20:c.A2791G:p.T931A,RALGAPA1:NM_194301:exon20:c.A2791G:p.T931A	exonic	ENSG00000174373	NA	nonsynonymous SNV	ENSG00000174373:ENST00000307138:exon20:c.A2791G:p.T931A,ENSG00000174373:ENST00000389698:exon20:c.A2791G:p.T931A,ENSG00000174373:ENST00000258840:exon21:c.A2932G:p.T978A,ENSG00000174373:ENST00000382366:exon21:c.A2830G:p.T944A,ENSG00000174373:ENST00000553892:exon21:c.A2932G:p.T978A	NA	NA	14q13.2	NA	NA	Name=4	NA	rs2274068	0.44	0.44	0.46	0.473842	0.1918	0.5804	0.2277	0.7557	0.4479	0.19	0.61	0.29	0.72	0.2908	0.72	0.52	T	0.0	B	0.001	B	0.237	N	1.000	P	0.345	N	-3.26	D	-0.924	T	0.000	T	0.179	-0.693	0.993	1.57	0.025	0.203	6.214	-0.693402	NA	0.34	0.177558	0.66069	NA	0.355	NA	8.6731754
785	18	6943264	6943264	G	A	exonic	LAMA1	NA	synonymous SNV	LAMA1:NM_005559:exon62:c.C8982T:p.D2994D	exonic	ENSG00000101680	NA	synonymous SNV	ENSG00000101680:ENST00000389658:exon62:c.C8982T:p.D2994D	Score=358;Name=lod=38	NA	18p11.31	Score=794;Name=V$CMYB_01	Name=FOXA1_(SC-101058)	Name=2	NA	rs2016639	0.26	0.26	0.227	0.286142	0.331	0.3413	0.4006	0.0204	0.4611	0.34	0.28	0.35	0.03	0.3307	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.637762	NA	NA	0.332093	0.06877	ID=COSM148377;OCCURENCE=1(stomach)	0.167	NA	8.6728736
785	1	50666515	50666515	C	T	exonic	ELAVL4	NA	nonsynonymous SNV	ELAVL4:NM_021952:exon7:c.C808T:p.P270S	exonic	ENSG00000162374	NA	nonsynonymous SNV	ENSG00000162374:ENST00000371821:exon7:c.C823T:p.P275S,ENSG00000162374:ENST00000371823:exon7:c.C808T:p.P270S	Score=661;Name=lod=649	NA	1p33	Score=857;Name=V$GATA1_03	NA	NA	NA	rs2494876	0.71	0.71	0.687	0.697085	0.9006	0.6528	0.8804	0.3442	0.8804	0.89	0.66	0.88	0.37	0.8398	0.92	0.67	T	0.001	B	0.002	B	0.001	N	0.000	P	0	N	2.89	T	-1.017	T	0.000	T	0.113	0.391	6.125	3.52	0.833	1.606	9.992	0.391338	NA	0.66	0.920581	0.429187	NA	0.63	NA	8.6723524
785	7	139724358	139724358	G	A	UTR3	PARP12	NM_022750:c.*2C>T	NA	NA	UTR3	ENSG00000059378	ENST00000263549:c.*2C>T,ENST00000473341:c.*703C>T,ENST00000489809:c.*369C>T	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs2269996	0.33	0.33	0.313	0.314696	0.1998	0.5258	0.3646	0.326	0.1646	0.19	0.52	0.33	0.33	0.2598	0.52	0	D	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.972	T	0.000	T	.	-0.31	2.526	-4.92	-1.270	-0.952	9.482	-0.309723	NA	NA	0.201977	0.315025	NA	0.254	NA	8.6717564
785	5	140789933	140789933	G	A	exonic	PCDHGB6	NA	nonsynonymous SNV	PCDHGB6:NM_018926:exon1:c.G2164A:p.A722T,PCDHGB6:NM_032100:exon1:c.G2164A:p.A722T	exonic	ENSG00000253305	NA	nonsynonymous SNV	ENSG00000253305:ENST00000520790:exon1:c.G2164A:p.A722T	NA	NA	5q31.3	NA	NA	NA	NA	rs3749767	0.28	0.28	0.279	0.306709	0.1918	0.1935	0.2594	0.5265	0.2781	0.21	0.2	0.26	0.51	0.2535	0.51	0.27	T	0.002	B	0.008	B	.	.	1.000	P	0.695	N	2.51	T	-0.968	T	0.000	T	0.011	0.28	5.515	-10.2	-3.157	-2.063	14.164	0.279981	NA	NA	0.216631	0.484223	NA	0.283	NA	8.6714024
785	11	77412851	77412851	A	G	exonic	RSF1	NA	nonsynonymous SNV	RSF1:NM_016578:exon6:c.T1423C:p.S475P	exonic	ENSG00000048649	NA	nonsynonymous SNV	ENSG00000048649:ENST00000480887:exon1:c.T667C:p.S223P,ENSG00000048649:ENST00000526324:exon2:c.T826C:p.S276P,ENSG00000048649:ENST00000360355:exon5:c.T1330C:p.S444P,ENSG00000048649:ENST00000308488:exon6:c.T1423C:p.S475P,ENSG00000048649:ENST00000528095:exon6:c.T1420C:p.S474P	Score=329;Name=lod=29	NA	11q14.1	NA	NA	NA	NA	rs7950873	0.13	0.13	0.097	0.124201	0.2316	0.0675	0.1599	0.0272	0.1779	0.22	0.08	0.19	0.03	0.1927	0.24	0.24	T	0.412	B	0.063	B	0.072	N	0.680	P	0.805	L	1.38	T	-1.112	T	0.000	T	0.426	1.431	10.72	2.51	0.917	0.838	7.052	1.430536	1.430536	0.1	0.2387	0.063182	NA	0.21	NA	8.6703334
785	3	100467018	100467018	T	C	exonic	TFG	NA	synonymous SNV	TFG:NM_001007565:exon8:c.T846C:p.P282P,TFG:NM_001195478:exon8:c.T846C:p.P282P,TFG:NM_001195479:exon8:c.T834C:p.P278P,TFG:NM_006070:exon8:c.T846C:p.P282P	exonic	ENSG00000114354	NA	synonymous SNV	ENSG00000114354:ENST00000240851:exon8:c.T846C:p.P282P,ENSG00000114354:ENST00000418917:exon8:c.T834C:p.P278P,ENSG00000114354:ENST00000476228:exon8:c.T834C:p.P278P,ENSG00000114354:ENST00000490574:exon8:c.T846C:p.P282P	Score=598;Name=lod=359	NA	3q12.2	NA	NA	NA	NA	rs11353	0.66	0.66	0.627	0.713059	0.6412	0.6518	0.8055	0.646	0.8753	0.64	0.62	0.81	0.63	0.6993	0.81	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.026	T	0.000	T	.	0.06	4.324	4.77	0.953	1.055	5.793	0.059524	NA	NA	0.656744	0.651838	NA	0.514	NA	8.6694226
785	1	62960101	62960101	A	G	exonic	DOCK7	NA	synonymous SNV	DOCK7:NM_001272000:exon39:c.T4942C:p.L1648L,DOCK7:NM_001272001:exon39:c.T4942C:p.L1648L,DOCK7:NM_033407:exon39:c.T4969C:p.L1657L,DOCK7:NM_001271999:exon40:c.T5035C:p.L1679L	exonic	ENSG00000116641	NA	synonymous SNV	ENSG00000116641:ENST00000340370:exon39:c.T4969C:p.L1657L,ENSG00000116641:ENST00000251157:exon40:c.T5035C:p.L1679L	NA	NA	1p31.3	Score=880;Name=V$RORA1_01	NA	NA	NA	rs10889335	0.31	0.31	0.308	0.349641	0.3171	0.1815	0.3573	0.4228	0.4519	0.33	0.17	0.32	0.41	0.3469	0.41	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.008	T	0.000	T	.	0.79	8.164	-8.68	-1.661	-0.049	22.854	0.79028	NA	NA	0.333721	0.391739	NA	0.268	NA	8.6689456
785	11	64418900	64418900	G	A	exonic	NRXN2	NA	synonymous SNV	NRXN2:NM_138732:exon12:c.C2625T:p.I875I,NRXN2:NM_015080:exon14:c.C2745T:p.I915I	exonic	ENSG00000110076	NA	synonymous SNV	ENSG00000110076:ENST00000377559:exon12:c.C2625T:p.I875I,ENSG00000110076:ENST00000377551:exon13:c.C2745T:p.I915I,ENSG00000110076:ENST00000409571:exon13:c.C2724T:p.I908I,ENSG00000110076:ENST00000265459:exon14:c.C2745T:p.I915I	Score=505;Name=lod=150	NA	11q13.1	Score=869;Name=V$NF1_Q6	Name=CTCF	Name=2	NA	rs526338	0.4	0.4	0.403	0.381789	0.7137	0.2212	0.415	0.0635	0.6125	0.71	0.23	0.47	0.08	0.576	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.015152	2.015152	NA	0.708052	0.165152	NA	0.507	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117850.2;CLNDSDB=.;CLNDSDBID=.	8.6689146
785	14	75022271	75022271	G	T	exonic	LTBP2	NA	nonsynonymous SNV	LTBP2:NM_000428:exon4:c.C956A:p.P319Q	exonic	ENSG00000119681	NA	nonsynonymous SNV	ENSG00000119681:ENST00000261978:exon4:c.C956A:p.P319Q,ENSG00000119681:ENST00000553939:exon4:c.C956A:p.P319Q,ENSG00000119681:ENST00000556690:exon4:c.C956A:p.P319Q	NA	NA	14q24.3	NA	NA	NA	NA	rs2304707	0.08	0.08	0.083	0.0876597	0.0457	0.0952	0.0648	0.1558	0.047	0.04	0.1	0.04	0.16	0.0656	0.16	0.02	D	0.877	P	0.216	B	0.767	U	1.000	P	1.245	L	-1.07	T	-1.096	T	0.001	T	0.296	0.313	5.695	-0.039	0.118	0.649	4.348	0.312852	NA	0.3	0.053837	0.159555	NA	0.043	NA	8.6681964
785	20	1896060	1896060	T	C	exonic	SIRPA	NA	nonsynonymous SNV	SIRPA:NM_001040023:exon2:c.T395C:p.V132A,SIRPA:NM_001040022:exon3:c.T395C:p.V132A,SIRPA:NM_080792:exon3:c.T395C:p.V132A	exonic	ENSG00000198053	NA	nonsynonymous SNV	ENSG00000198053:ENST00000358771:exon2:c.T395C:p.V132A,ENSG00000198053:ENST00000356025:exon3:c.T395C:p.V132A,ENSG00000198053:ENST00000400068:exon3:c.T395C:p.V132A	NA	NA	20p13	NA	NA	NA	NA	rs114499682	NA	NA	NA	0.409345	0.3171	0.625	0.4222	0.2761	0.453	NA	NA	NA	NA	0.3484	NA	0.24	T	0.03	B	0.161	B	0.008	N	1.000	N	1.495	L	-0.07	T	-0.963	T	0.191	T	0.28	1.858	12.17	-4.1	-0.575	-1.908	4.562	1.858225	1.858225	0.08	NA	NA	ID=COSM1410605;OCCURENCE=1(large_intestine)	NA	NA	8.6678334
785	8	10465942	10465942	T	A	exonic	RP1L1	NA	nonsynonymous SNV	RP1L1:NM_178857:exon4:c.A5666T:p.D1889V	exonic	ENSG00000183638	NA	nonsynonymous SNV	ENSG00000183638:ENST00000382483:exon4:c.A5666T:p.D1889V	NA	NA	8p23.1	NA	NA	NA	NA	rs28446662	0.26	0.26	0.201	0.23742	0.2147	0.3929	0.3386	0.1679	0.1227	0.22	0.42	0.28	0.13	0.2501	0.42	0.28	T	0.005	B	0.006	B	.	.	1.000	P	0	N	3.17	T	-0.921	T	0.000	T	0.033	-0.064	3.686	-2.8	-0.837	-1.203	4.542	-0.064495	NA	0.02	0.200987	0.185963	NA	0.203	NA	8.6675464
785	2	49189921	49189921	C	T	exonic	FSHR	NA	nonsynonymous SNV	FSHR:NM_181446:exon9:c.G1961A:p.S654N,FSHR:NM_000145:exon10:c.G2039A:p.S680N	exonic	ENSG00000170820	NA	nonsynonymous SNV	ENSG00000170820:ENST00000541117:exon7:c.G1247A:p.S416N,ENSG00000170820:ENST00000304421:exon9:c.G1961A:p.S654N,ENSG00000170820:ENST00000346173:exon9:c.G1853A:p.S618N,ENSG00000170820:ENST00000406846:exon10:c.G2039A:p.S680N	Score=371;Name=lod=43	NA	2p16.3	Score=828;Name=V$FREAC4_01	NA	NA	NA	rs6166	0.6	0.6	0.594	0.592652	0.5507	0.6776	0.5778	0.5953	0.5552	0.55	0.69	0.59	0.58	0.5727	0.69	.	.	0.0	B	0.001	B	0.001	N	1.000	P	.	.	-0.47	T	-0.922	T	0.000	T	0.031	-1.569	0.015	1.52	0.152	0.133	9.068	-1.568847	NA	0.97	0.543256	0.587381	NA	0.558	CLINSIG=drug-response|other;CLNDBN=Ovarian_response_to_FSH_stimulation|Ovarian_hyperstimulation_syndrome;CLNREVSTAT=single|single;CLNACC=RCV000017634.1|RCV000017635.1;CLNDSDB=MedGen|MedGen:OMIM:SNOMED_CT;CLNDSDBID=C1848715|C0085083:608115:129635004	8.6666774
785	1	161126745	161126745	G	A	exonic	UFC1	NA	synonymous SNV	UFC1:NM_016406:exon2:c.G129A:p.V43V	exonic	ENSG00000143222	NA	synonymous SNV	ENSG00000143222:ENST00000368003:exon2:c.G129A:p.V43V	Score=507;Name=lod=154	NA	1q23.3	Score=843;Name=V$FOXO4_02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.952975	NA	NA	NA	NA	NA	NA	NA	8.6666666
785	3	99569638	99569638	T	C	exonic	FILIP1L	NA	synonymous SNV	FILIP1L:NM_014890:exon2:c.A162G:p.E54E,FILIP1L:NM_001042459:exon5:c.A882G:p.E294E,FILIP1L:NM_182909:exon5:c.A882G:p.E294E	exonic	ENSG00000168386	NA	synonymous SNV	ENSG00000168386:ENST00000383694:exon2:c.A162G:p.E54E,ENSG00000168386:ENST00000471562:exon2:c.A162G:p.E54E,ENSG00000168386:ENST00000495625:exon3:c.A162G:p.E54E,ENSG00000168386:ENST00000331335:exon5:c.A882G:p.E294E,ENSG00000168386:ENST00000354552:exon5:c.A882G:p.E294E	Score=616;Name=lod=425	NA	3q12.1	NA	NA	Name=19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.447102	NA	NA	NA	NA	NA	NA	NA	8.6666666
785	12	132490838	132490838	C	G	exonic	EP400	NA	synonymous SNV	EP400:NM_015409:exon14:c.C3117G:p.V1039V	exonic	ENSG00000183495	NA	synonymous SNV	ENSG00000183495:ENST00000332482:exon13:c.C3006G:p.V1002V,ENSG00000183495:ENST00000330386:exon14:c.C3117G:p.V1039V,ENSG00000183495:ENST00000389561:exon14:c.C3117G:p.V1039V,ENSG00000183495:ENST00000389562:exon14:c.C3114G:p.V1038V,ENSG00000183495:ENST00000333577:exon15:c.C3225G:p.V1075V	Score=462;Name=lod=101	NA	12q24.33	NA	NA	Name=2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.890294	NA	NA	NA	NA	NA	NA	NA	8.6666666
785	2	48026799	48026799	C	T	exonic	MSH6	NA	synonymous SNV	MSH6:NM_000179:exon4:c.C1677T:p.C559C	exonic	ENSG00000116062	NA	synonymous SNV	ENSG00000116062:ENST00000540021:exon2:c.C1287T:p.C429C,ENSG00000116062:ENST00000234420:exon4:c.C1677T:p.C559C,ENSG00000116062:ENST00000538136:exon4:c.C771T:p.C257C	Score=493;Name=lod=135	NA	2p16.3	NA	Name=BCL3	NA	NA	rs63749893	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000008266	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.057606	NA	NA	NA	NA	NA	NA	CLINSIG=unknown;CLNDBN=Lynch_syndrome;CLNREVSTAT=exp;CLNACC=RCV000074679.1;CLNDSDB=GeneReviews:MedGen:SNOMED_CT;CLNDSDBID=NBK1211:C0009405:315058005	8.6666583
785	20	8745817	8745817	G	A	exonic	PLCB1	NA	synonymous SNV	PLCB1:NM_015192:exon26:c.G2742A:p.K914K,PLCB1:NM_182734:exon26:c.G2742A:p.K914K	exonic	ENSG00000182621	NA	synonymous SNV	ENSG00000182621:ENST00000338037:exon26:c.G2742A:p.K914K,ENSG00000182621:ENST00000378637:exon26:c.G2742A:p.K914K,ENSG00000182621:ENST00000378641:exon26:c.G2742A:p.K914K	Score=457;Name=lod=96	NA	20p12.3	Score=836;Name=V$RFX1_02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00002492	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.109695	NA	NA	NA	NA	NA	NA	NA	8.6666417
785	19	4028798	4028798	G	C	exonic	PIAS4	NA	synonymous SNV	PIAS4:NM_015897:exon6:c.G753C:p.L251L	exonic	ENSG00000105229	NA	synonymous SNV	ENSG00000105229:ENST00000262971:exon6:c.G753C:p.L251L	Score=589;Name=lod=329	NA	19p13.3	Score=798;Name=V$COMP1_01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00002496	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.151904	NA	NA	NA	NA	NA	NA	NA	8.6666416
785	19	42213898	42213898	C	T	exonic	CEACAM5	NA	synonymous SNV	CEACAM5:NM_004363:exon2:c.C364T:p.L122L	exonic	ENSG00000105388,ENSG00000267881	NA	synonymous SNV	ENSG00000105388:ENST00000221992:exon2:c.C364T:p.L122L,ENSG00000105388:ENST00000398599:exon2:c.C364T:p.L122L,ENSG00000105388:ENST00000405816:exon2:c.C364T:p.L122L,ENSG00000267881:ENST00000598976:exon2:c.C364T:p.L122L	NA	NA	19q13.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00003341	NA	.	.	.	.	.	.	.	.	1.000	N	.	.	.	.	-1.000	T	0.058	T	.	-0.385	2.194	-0.993	0.156	-1.767	5.338	-0.3845	NA	NA	NA	NA	NA	NA	NA	8.6666332
785	10	99358629	99358629	C	T	exonic	HOGA1	NA	synonymous SNV	HOGA1:NM_138413:exon2:c.C309T:p.N103N	exonic	ENSG00000241935	NA	synonymous SNV	ENSG00000241935:ENST00000370646:exon2:c.C309T:p.N103N	Score=471;Name=lod=109	NA	10q24.2	NA	NA	Name=6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00004943	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.043967	NA	NA	NA	NA	NA	NA	NA	8.6666172
785	20	45221159	45221159	C	T	exonic	SLC13A3	NA	synonymous SNV	SLC13A3:NM_001193342:exon6:c.G510A:p.P170P,SLC13A3:NM_022829:exon6:c.G804A:p.P268P,SLC13A3:NM_001011554:exon7:c.G663A:p.P221P,SLC13A3:NM_001193340:exon7:c.G663A:p.P221P	exonic	ENSG00000158296	NA	synonymous SNV	ENSG00000158296:ENST00000495082:exon5:c.G663A:p.P221P,ENSG00000158296:ENST00000279027:exon6:c.G804A:p.P268P,ENSG00000158296:ENST00000290317:exon6:c.G663A:p.P221P,ENSG00000158296:ENST00000396360:exon6:c.G663A:p.P221P,ENSG00000158296:ENST00000472148:exon6:c.G663A:p.P221P,ENSG00000158296:ENST00000468915:exon8:c.G663A:p.P221P	NA	NA	20q13.12	NA	NA	NA	NA	rs139819116	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00004977	0.0005	.	.	.	.	.	.	.	.	1.000	D	.	.	.	.	-0.784	T	0.130	T	.	0.91	8.703	-10.6	-3.351	-0.581	7.243	0.910273	NA	NA	0	0.000454	ID=COSM189078;OCCURENCE=1(large_intestine)	NA	NA	8.6666168
785	19	21910313	21910313	C	G	exonic	ZNF100	NA	synonymous SNV	ZNF100:NM_173531:exon5:c.G801C:p.G267G	exonic	ENSG00000197020	NA	synonymous SNV	ENSG00000197020:ENST00000305570:exon4:c.G609C:p.G203G,ENSG00000197020:ENST00000358296:exon5:c.G801C:p.G267G	Score=366;Name=lod=41	NA	19p12	NA	Name=ZNF274	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00005017	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.164785	NA	NA	NA	NA	NA	NA	NA	8.6666164
785	11	64876383	64876383	C	T	exonic	VPS51	NA	synonymous SNV	VPS51:NM_013265:exon5:c.C1440T:p.F480F	exonic	ENSG00000149823	NA	synonymous SNV	ENSG00000149823:ENST00000279281:exon5:c.C1440T:p.F480F	Score=585;Name=lod=317	NA	11q13.1	NA	Name=FOXA1_(C-20),ERalpha_a,c-Myc,Pol2,GATA3_(SC-268),p300	Name=5	NA	rs143862116	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00005185	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.386751	NA	NA	NA	NA	NA	NA	NA	8.6666148
785	12	133384698	133384698	C	T	exonic	GOLGA3	NA	synonymous SNV	GOLGA3:NM_001172557:exon5:c.G957A:p.S319S,GOLGA3:NM_005895:exon5:c.G957A:p.S319S	exonic	ENSG00000090615	NA	synonymous SNV	ENSG00000090615:ENST00000450791:exon4:c.G957A:p.S319S,ENSG00000090615:ENST00000537452:exon4:c.G957A:p.S319S,ENSG00000090615:ENST00000204726:exon5:c.G957A:p.S319S,ENSG00000090615:ENST00000456883:exon5:c.G957A:p.S319S,ENSG00000090615:ENST00000545875:exon5:c.G957A:p.S319S	Score=417;Name=lod=66	NA	12q24.33	Score=707;Name=V$NRSF_01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00006016	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.589333	NA	NA	NA	NA	NA	NA	NA	8.6666064
785	7	20824833	20824833	G	A	exonic	SP8	NA	synonymous SNV	SP8:NM_182700:exon2:c.C603T:p.H201H,SP8:NM_198956:exon3:c.C549T:p.H183H	exonic	ENSG00000164651	NA	synonymous SNV	ENSG00000164651:ENST00000418710:exon2:c.C603T:p.H201H,ENSG00000164651:ENST00000361443:exon3:c.C549T:p.H183H	Score=715;Name=lod=1072	NA	7p21.1	Score=855;Name=V$CEBPB_02	Name=CTCF	NA	NA	rs374176171	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0002	0.0001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.35515	NA	0	0.000138	0	NA	NA	NA	8.6663286
785	19	41307140	41307140	C	T	exonic	EGLN2	NA	synonymous SNV	EGLN2:NM_053046:exon2:c.C663T:p.D221D,EGLN2:NM_080732:exon2:c.C663T:p.D221D	exonic	ENSG00000269858	NA	synonymous SNV	ENSG00000269858:ENST00000593726:exon1:c.C663T:p.D221D,ENSG00000269858:ENST00000303961:exon2:c.C663T:p.D221D,ENSG00000269858:ENST00000406058:exon2:c.C663T:p.D221D	Score=577;Name=lod=296	NA	19q13.2	Score=743;Name=V$TAXCREB_02	Name=Pol2-4H8	NA	NA	rs150973573	0.0032	0.0032	NA	0.00199681	NA	NA	0.0058	0.0045	NA	NA	NA	0.01	0.01	0.0007	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.041245	NA	NA	0.000116	0.004087	ID=COSM1393896;OCCURENCE=1(large_intestine)	NA	NA	8.6658506
785	14	93299631	93299631	C	T	exonic	GOLGA5	NA	synonymous SNV	GOLGA5:NM_005113:exon10:c.C1884T:p.S628S	exonic	ENSG00000066455	NA	synonymous SNV	ENSG00000066455:ENST00000163416:exon10:c.C1884T:p.S628S,ENSG00000066455:ENST00000355976:exon10:c.C1884T:p.S628S	NA	NA	14q32.12	NA	NA	NA	NA	rs371855374	NA	NA	NA	0.000399361	0.001	NA	NA	0.0008	NA	NA	NA	NA	NA	0.0002	0.0005	.	.	.	.	.	.	.	.	1.000	N	.	.	.	.	-1.028	T	0.059	T	.	1.413	10.66	-10.4	-2.363	-1.218	8.666	1.413176	1.413176	NA	0.000465	0	NA	NA	NA	8.6650016
786	14	21936855	21936855	T	G	exonic	RAB2B	NA	synonymous SNV	RAB2B:NM_001163380:exon3:c.A105C:p.G35G,RAB2B:NM_032846:exon4:c.A243C:p.G81G	exonic	ENSG00000129472	NA	synonymous SNV	ENSG00000129472:ENST00000397762:exon4:c.A243C:p.G81G	Score=635;Name=lod=510	NA	14q11.2	Score=925;Name=V$LMO2COM_01	NA	NA	NA	NA	NA	NA	NA	0.00339457	NA	NA	NA	NA	0.0174	NA	NA	NA	NA	0.0018	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.508784	1.508784	NA	NA	NA	NA	NA	NA	8.6648666
786	22	29704662	29704662	C	T	exonic	GAS2L1	NA	synonymous SNV	GAS2L1:NM_152237:exon2:c.C567T:p.P189P	exonic	ENSG00000185340	NA	synonymous SNV	ENSG00000185340:ENST00000471961:exon1:c.C567T:p.P189P,ENSG00000185340:ENST00000341313:exon2:c.C567T:p.P189P,ENSG00000185340:ENST00000360113:exon2:c.C567T:p.P189P,ENSG00000185340:ENST00000403764:exon2:c.C567T:p.P189P,ENSG00000185340:ENST00000406549:exon2:c.C567T:p.P189P,ENSG00000185340:ENST00000407647:exon2:c.C567T:p.P189P,ENSG00000185340:ENST00000407854:exon2:c.C567T:p.P189P	NA	NA	22q12.2	NA	Name=Egr-1	Name=5	NA	NA	NA	NA	NA	0.00119808	NA	NA	NA	NA	0.0061	NA	NA	NA	NA	0.0018	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.876715	NA	NA	NA	NA	NA	NA	NA	8.6648666
786	8	24771984	24771984	G	T	exonic	NEFM	NA	synonymous SNV	NEFM:NM_005382:exon1:c.G678T:p.S226S	exonic	ENSG00000104722	NA	synonymous SNV	ENSG00000104722:ENST00000221166:exon1:c.G678T:p.S226S,ENSG00000104722:ENST00000437366:exon1:c.G678T:p.S226S,ENSG00000104722:ENST00000518131:exon1:c.G678T:p.S226S	Score=823;Name=lod=2949	NA	8p21.2	Score=855;Name=V$CHOP_01	NA	Name=81	NA	rs61735463	NA	NA	NA	0.00199681	0.001	NA	NA	0.0068	NA	NA	NA	NA	NA	0.0008	0.0066	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.956319	NA	NA	0.000465	0.006582	NA	NA	NA	8.6644016
786	1	36937065	36937065	A	G	exonic	CSF3R	NA	synonymous SNV	CSF3R:NM_000760:exon10:c.T1254C:p.R418R,CSF3R:NM_156039:exon10:c.T1254C:p.R418R,CSF3R:NM_172313:exon10:c.T1254C:p.R418R	exonic	ENSG00000119535	NA	synonymous SNV	ENSG00000119535:ENST00000331941:exon8:c.T1254C:p.R418R,ENSG00000119535:ENST00000338937:exon8:c.T1254C:p.R418R,ENSG00000119535:ENST00000418048:exon8:c.T1254C:p.R418R,ENSG00000119535:ENST00000440588:exon8:c.T1254C:p.R418R,ENSG00000119535:ENST00000361632:exon9:c.T1254C:p.R418R,ENSG00000119535:ENST00000373103:exon10:c.T1254C:p.R418R,ENSG00000119535:ENST00000373104:exon10:c.T1254C:p.R418R,ENSG00000119535:ENST00000373106:exon10:c.T1254C:p.R418R	NA	NA	1p34.3	NA	NA	NA	NA	rs3917980	0.21	0.21	0.157	0.246406	0.338	0.13	0.2003	0.1717	0.4059	0.34	0.1	0.24	0.14	0.3156	0.35	.	.	.	.	.	.	.	.	0.060	P	.	.	.	.	-0.971	T	0.000	T	.	-0.82	0.623	-8.29	-1.460	-2.296	4.022	-0.820494	NA	NA	0.348721	0.20404	NA	0.203	NA	8.6643456
786	9	139693596	139693596	T	C	exonic	KIAA1984	NA	nonsynonymous SNV	KIAA1984:NM_001039374:exon2:c.T113C:p.M38T	exonic	ENSG00000213213	NA	nonsynonymous SNV	ENSG00000213213:ENST00000338005:exon2:c.T113C:p.M38T,ENSG00000213213:ENST00000479371:exon2:c.T113C:p.M38T	NA	NA	9q34.3	NA	Name=p300,FOXA1_(SC-101058),HDAC2_(SC-6296),c-Myc,HEY1	Name=11	NA	rs945386	0.25	0.25	0.244	0.273363	0.2147	0.2421	0.2968	0.3374	0.2628	0.21	0.22	0.27	0.33	0.2374	0.33	0.43	T	0.0	B	0.0	B	0.974	N	1.000	P	-0.665	N	2.82	T	-0.895	T	0.000	T	0.061	-0.661	1.102	1.02	-0.124	0.284	7.377	-0.660878	NA	0.22	0.217459	0.299265	NA	0.152	NA	8.6637744
786	12	56094816	56094816	C	T	exonic	ITGA7	NA	synonymous SNV	ITGA7:NM_001144996:exon4:c.G537A:p.G179G,ITGA7:NM_001144997:exon4:c.G246A:p.G82G,ITGA7:NM_002206:exon4:c.G537A:p.G179G	exonic	ENSG00000135424	NA	synonymous SNV	ENSG00000135424:ENST00000557257:exon2:c.G63A:p.G21G,ENSG00000135424:ENST00000257879:exon4:c.G537A:p.G179G,ENSG00000135424:ENST00000257880:exon4:c.G537A:p.G179G,ENSG00000135424:ENST00000347027:exon4:c.G537A:p.G179G,ENSG00000135424:ENST00000394229:exon4:c.G537A:p.G179G,ENSG00000135424:ENST00000394230:exon4:c.G537A:p.G179G,ENSG00000135424:ENST00000452168:exon4:c.G246A:p.G82G,ENSG00000135424:ENST00000553804:exon4:c.G537A:p.G179G,ENSG00000135424:ENST00000555728:exon4:c.G537A:p.G179G	Score=622;Name=lod=448	NA	12q13.2	Score=1000;Name=V$MZF1_01	Name=c-Jun	NA	NA	rs145463677	0.0014	0.0014	0	0.000798722	0.002	NA	0.0014	NA	0.001	0.0026	NA	0.0028	NA	0.0008	0.0028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.593918	NA	NA	0.001047	0.000454	NA	NA	NA	8.6628196
786	7	103969525	103969525	C	T	exonic	LHFPL3	NA	synonymous SNV	LHFPL3:NM_199000:exon1:c.C298T:p.L100L	exonic	ENSG00000187416	NA	synonymous SNV	ENSG00000187416:ENST00000401970:exon1:c.C256T:p.L86L,ENSG00000187416:ENST00000424859:exon1:c.C256T:p.L86L,ENSG00000187416:ENST00000535008:exon1:c.C298T:p.L100L,ENSG00000187416:ENST00000543266:exon1:c.C298T:p.L100L	Score=831;Name=lod=3182	NA	7q22.2	Score=786;Name=V$AHR_01	NA	Name=3	NA	rs185070516	0.0014	0.0014	NA	0.000599042	0.002	NA	0.0014	NA	NA	0.0026	NA	0.0028	NA	0.0009	0.0028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.996819	NA	NA	0.000952	0	NA	NA	NA	8.6628146
786	4	111409705	111409705	T	C	exonic	ENPEP	NA	nonsynonymous SNV	ENPEP:NM_001977:exon2:c.T653C:p.V218A	exonic	ENSG00000138792	NA	nonsynonymous SNV	ENSG00000138792:ENST00000265162:exon2:c.T653C:p.V218A	Score=620;Name=lod=442	NA	4q25	NA	NA	NA	NA	rs1126483	0.55	0.55	0.519	0.509984	0.5427	0.6488	0.5245	0.3722	0.5092	0.55	0.69	0.55	0.38	0.5771	0.69	1	T	0.0	B	0.001	B	0.000	N	1.000	P	-2.415	N	4.25	T	-1.003	T	0.000	T	0.096	0.07	4.381	4.18	0.515	5.788	9.942	0.070357	NA	1	0.552326	0.427372	ID=COSM1131302;OCCURENCE=1(prostate)	0.493	NA	8.6612074
786	16	25263278	25263278	G	A	exonic	ZKSCAN2	NA	nonsynonymous SNV	ZKSCAN2:NM_001012981:exon4:c.C757T:p.L253F	exonic	ENSG00000155592	NA	nonsynonymous SNV	ENSG00000155592:ENST00000328086:exon4:c.C757T:p.L253F	NA	NA	16p12.1	NA	NA	NA	NA	rs2112811	0.3	0.3	0.311	0.334665	0.2107	0.3284	0.3026	0.475	0.3016	0.21	0.31	0.25	0.48	0.254	0.48	0.35	T	0.108	B	0.17	B	0.024	N	1.000	P	2.625	M	5.1	T	-1.017	T	0.000	T	0.097	0.372	6.02	2.52	0.866	0.592	8.299	0.372047	NA	0.25	0.207558	0.452208	ID=COSM148056;OCCURENCE=1(stomach),1(prostate)	0.37	NA	8.6610754
786	10	115804956	115804956	C	A	exonic	ADRB1	NA	synonymous SNV	ADRB1:NM_000684:exon1:c.C1065A:p.P355P	exonic	ENSG00000043591	NA	synonymous SNV	ENSG00000043591:ENST00000369295:exon1:c.C1065A:p.P355P	Score=747;Name=lod=1448	NA	10q25.3	NA	Name=ELF1_(SC-631),Max,PAX5-C20	Name=23	NA	rs141633952	NA	NA	NA	0.000199681	NA	NA	NA	NA	0.001	NA	NA	NA	NA	0.002	0.0037	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.06735	NA	NA	0.003743	0.000912	NA	NA	NA	8.6609236
786	1	152193286	152193286	G	T	exonic	HRNR	NA	nonsynonymous SNV	HRNR:NM_001009931:exon3:c.C819A:p.H273Q	exonic	ENSG00000197915	NA	nonsynonymous SNV	ENSG00000197915:ENST00000368801:exon3:c.C819A:p.H273Q	NA	NA	1q21.3	NA	NA	NA	NA	rs7545406	0.4	0.4	0.374	0.345847	0.5855	0.2917	0.2795	0.2088	0.3875	0.59	0.32	0.36	0.22	0.4964	0.59	0.67	T	0.001	B	0.001	B	.	.	1.000	P	0.205	N	4.09	T	-0.901	T	0.001	T	0.014	0.17	4.913	-8.81	-3.578	-4.851	0.981	0.169574	NA	0.07	0.591047	0.263504	ID=COSM146613;OCCURENCE=1(stomach)	0.377	NA	8.6603864
786	6	152708310	152708310	G	A	exonic	SYNE1	NA	nonsynonymous SNV	SYNE1:NM_033071:exon54:c.C8405T:p.A2802V,SYNE1:NM_182961:exon54:c.C8384T:p.A2795V	exonic	ENSG00000131018	NA	nonsynonymous SNV	ENSG00000131018:ENST00000265368:exon54:c.C8384T:p.A2795V,ENSG00000131018:ENST00000367255:exon54:c.C8384T:p.A2795V,ENSG00000131018:ENST00000423061:exon54:c.C8405T:p.A2802V,ENSG00000131018:ENST00000448038:exon55:c.C8405T:p.A2802V,ENSG00000131018:ENST00000341594:exon57:c.C8501T:p.A2834V	NA	NA	6q25.2	NA	NA	NA	NA	rs214950	0.26	0.26	0.267	0.249002	0.2167	0.4018	0.1614	0.152	0.318	0.22	0.44	0.2	0.15	0.2373	0.44	0.21	T	0.094	B	0.012	B	0.021	N	0.981	P	0.69	N	1.27	T	-1.029	T	0.017	T	0.046	0.09	4.484	1.51	0.350	4.552	2.148	0.089763	NA	0.06	0.218953	0.15842	NA	0.21	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118492.2;CLNDSDB=.;CLNDSDBID=.	8.6603804
786	6	32609813	32609813	T	C	exonic	HLA-DQA1	NA	synonymous SNV	HLA-DQA1:NM_002122:exon3:c.T396C:p.I132I	exonic	ENSG00000196735	NA	synonymous SNV	ENSG00000196735:ENST00000343139:exon3:c.T396C:p.I132I,ENSG00000196735:ENST00000374949:exon3:c.T396C:p.I132I,ENSG00000196735:ENST00000395363:exon3:c.T396C:p.I132I,ENSG00000196735:ENST00000496318:exon3:c.T396C:p.I132I	Score=393;Name=lod=53	NA	6p21.32	NA	Name=Pol2,Pol2-4H8	Name=3	NA	rs707951	0.66	0.66	0.582	0.673722	0.6759	0.7024	0.7767	0.5605	0.7219	0.66	0.74	0.75	0.52	0.6761	0.75	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.055	T	0.085	T	.	-0.143	3.303	3.23	0.521	0.767	8.409	-0.14256	NA	NA	0.6543	0.505625	NA	0.616	NA	8.6603666
786	11	118922603	118922603	C	T	exonic	HYOU1	NA	synonymous SNV	HYOU1:NM_001130991:exon12:c.G1266A:p.Q422Q,HYOU1:NM_006389:exon12:c.G1266A:p.Q422Q	exonic	ENSG00000149428	NA	synonymous SNV	ENSG00000149428:ENST00000543287:exon11:c.G1005A:p.Q335Q,ENSG00000149428:ENST00000404233:exon12:c.G1266A:p.Q422Q,ENSG00000149428:ENST00000529972:exon12:c.G1266A:p.Q422Q,ENSG00000149428:ENST00000530473:exon12:c.G1266A:p.Q422Q,ENSG00000149428:ENST00000525859:exon13:c.G1266A:p.Q422Q	Score=512;Name=lod=161	NA	11q23.3	NA	Name=PAX5-N19,NFKB,Pol2-4H8,YY1,EBF1_(C-8),Oct-2,ELF1_(SC-631),YY1_(C-20),PU.1,Pol2,POU2F2,TAF1	Name=7	NA	rs75379910	0.02	0.02	0.027	0.0147764	0.001	NA	0.0072	0.0514	NA	0.0013	NA	0.01	0.09	0.0046	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.964225	NA	NA	0.001281	0.045	NA	0.022	NA	8.6597856
786	7	94898811	94898811	G	A	exonic	PPP1R9A	NA	nonsynonymous SNV	PPP1R9A:NM_001166161:exon12:c.G2996A:p.R999Q,PPP1R9A:NM_001166162:exon12:c.G3050A:p.R1017Q,PPP1R9A:NM_001166160:exon14:c.G3116A:p.R1039Q	exonic	ENSG00000158528	NA	nonsynonymous SNV	ENSG00000158528:ENST00000289495:exon12:c.G2996A:p.R999Q,ENSG00000158528:ENST00000456331:exon12:c.G3050A:p.R1017Q,ENSG00000158528:ENST00000424654:exon13:c.G3050A:p.R1017Q,ENSG00000158528:ENST00000433360:exon14:c.G3116A:p.R1039Q	Score=361;Name=lod=39	NA	7q21.3	NA	NA	NA	NA	rs854524	0.6	0.6	0.598	0.604832	0.5457	0.619	0.6599	0.6823	0.5072	0.53	0.61	0.64	0.65	0.5722	0.68	0.83	T	0.0	B	0.0	B	.	.	0.000	P	.	.	2.6	T	-0.998	T	0.000	T	0.022	-0.045	3.784	2.47	0.460	1.685	7.171	-0.045034	NA	1	0.557247	0.678571	NA	0.71	NA	8.6581864
786	1	17030615	17030615	G	A	ncRNA_exonic	ESPNP	NA	NA	NA	ncRNA_exonic	ENSG00000268869	NA	NA	NA	Score=498;Name=lod=141	NA	1p36.13	Score=767;Name=V$PAX5_01	Name=ZNF263	Name=20	NA	rs200500243	NA	NA	0.003	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.009	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.195567	NA	NA	NA	NA	NA	NA	NA	8.6576666
786	3	30715608	30715608	A	G	exonic	TGFBR2	NA	synonymous SNV	TGFBR2:NM_003242:exon5:c.A1266G:p.A422A,TGFBR2:NM_001024847:exon6:c.A1341G:p.A447A	exonic	ENSG00000163513	NA	synonymous SNV	ENSG00000163513:ENST00000295754:exon5:c.A1266G:p.A422A,ENSG00000163513:ENST00000359013:exon6:c.A1341G:p.A447A	Score=545;Name=lod=218	NA	3p24.1	Score=799;Name=V$CDPCR3_01	NA	NA	NA	rs2228047	0.03	0.03	0.026	0.0311502	NA	0.001	0.0058	0.1127	0.002	NA	NA	0.01	0.12	0.0088	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.539401	1.539401	NA	0.000814	0.091693	NA	0.029	CLINSIG=non-pathogenic|non-pathogenic|non-pathogenic;CLNDBN=Loeys-Dietz_syndrome|not_specified|not_provided;CLNREVSTAT=single|single|single;CLNACC=RCV000030547.1|RCV000037731.1|RCV000125491.1;CLNDSDB=GeneReviews:MedGen:SNOMED_CT|.|.;CLNDSDBID=NBK1133:C2697932:446263001|.|.	8.6570526
786	3	361508	361508	C	T	exonic	CHL1	NA	nonsynonymous SNV	CHL1:NM_001253388:exon1:c.C49T:p.L17F,CHL1:NM_001253387:exon3:c.C49T:p.L17F,CHL1:NM_006614:exon3:c.C49T:p.L17F	exonic	ENSG00000134121	NA	nonsynonymous SNV	ENSG00000134121:ENST00000427688:exon2:c.C49T:p.L17F,ENSG00000134121:ENST00000435603:exon2:c.C49T:p.L17F,ENSG00000134121:ENST00000256509:exon3:c.C49T:p.L17F,ENSG00000134121:ENST00000397491:exon3:c.C49T:p.L17F,ENSG00000134121:ENST00000421198:exon3:c.C49T:p.L17F,ENSG00000134121:ENST00000449294:exon3:c.C49T:p.L17F	NA	NA	3p26.3	NA	NA	NA	NA	rs2272522	0.31	0.31	0.316	0.352037	0.2048	0.3085	0.2378	0.5643	0.3425	0.19	0.31	0.23	0.55	0.2697	0.55	1	T	0.001	B	0.003	B	0.099	N	1.000	P	0	N	1.01	T	-0.975	T	0.000	T	0.331	-1.15	0.103	-2.03	-0.954	-0.166	10.765	-1.149599	NA	1	0.202326	0.517257	ID=COSM149325;OCCURENCE=1(stomach),1(large_intestine)	0.326	NA	8.6565074
786	5	108714298	108714298	T	C	exonic	PJA2	NA	nonsynonymous SNV	PJA2:NM_014819:exon4:c.A890G:p.Q297R	exonic	ENSG00000198961	NA	nonsynonymous SNV	ENSG00000198961:ENST00000361557:exon3:c.A890G:p.Q297R,ENSG00000198961:ENST00000361189:exon4:c.A890G:p.Q297R	Score=251;Name=lod=14	NA	5q21.3	NA	NA	NA	NA	rs1045706	0.31	0.31	0.27	0.320887	0.5895	0.0565	0.4712	0.0643	0.5573	0.59	0.04	0.47	0.08	0.4965	0.59	0.85	T	0.001	B	0.001	B	0.035	N	1.000	P	1.61	L	3.43	T	-0.921	T	0.000	T	0.05	-1.288	0.04	2.88	1.054	0.437	1.742	-1.287968	NA	0.17	0.59186	0.156676	NA	0.377	NA	8.6554734
787	10	99376152	99376152	A	G	exonic	MORN4	NA	synonymous SNV	MORN4:NM_001098831:exon5:c.T309C:p.P103P,MORN4:NM_178832:exon5:c.T309C:p.P103P	exonic	ENSG00000171160	NA	stoploss	ENSG00000171160:ENST00000478953:exon4:c.T199C:p.X67R	NA	NA	10q24.2	NA	NA	NA	NA	rs3814556	0.32	0.32	0.301	0.334465	0.1978	0.2837	0.2608	0.6142	0.2014	0.19	0.28	0.26	0.61	0.262	0.61	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	-0.539	1.553	-10.1	-3.319	-2.921	3.474	-0.5387	NA	NA	0.219651	0.541307	ID=COSM147021,COSM147022;OCCURENCE=1(stomach)	0.348	NA	8.6538823
787	19	12975884	12975884	C	T	exonic	MAST1	NA	synonymous SNV	MAST1:NM_014975:exon14:c.C1530T:p.H510H	exonic	ENSG00000105613	NA	synonymous SNV	ENSG00000105613:ENST00000251472:exon14:c.C1530T:p.H510H	Score=542;Name=lod=212	NA	19p13.2	Score=802;Name=V$XBP1_01	Name=TCF4	NA	NA	rs35952311	0	0	NA	0.00259585	0.003	NA	0.0014	NA	0.0092	NA	NA	NA	NA	0.0043	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.556803	NA	NA	0.006628	0.001362	NA	0.007	NA	8.6527386
787	10	115411614	115411614	A	G	exonic	NRAP	NA	nonsynonymous SNV	NRAP:NM_001261463:exon7:c.T623C:p.V208A,NRAP:NM_006175:exon7:c.T623C:p.V208A,NRAP:NM_198060:exon7:c.T623C:p.V208A	exonic	ENSG00000197893	NA	nonsynonymous SNV	ENSG00000197893:ENST00000359988:exon7:c.T623C:p.V208A,ENSG00000197893:ENST00000360478:exon7:c.T623C:p.V208A,ENSG00000197893:ENST00000369358:exon7:c.T623C:p.V208A,ENSG00000197893:ENST00000369360:exon7:c.T623C:p.V208A	Score=317;Name=lod=26	NA	10q25.3	Score=782;Name=V$PAX5_02	NA	NA	NA	rs2154028	0.88	0.88	0.872	0.877596	0.8936	0.9038	0.9107	0.8086	0.9039	0.89	0.92	0.9	0.81	0.8952	0.92	0.56	T	0.0	B	0.002	B	0.000	N	0.000	P	-0.07	N	2.61	T	-1.015	T	0.000	T	0.075	-0.625	1.228	5.13	0.907	2.211	9.734	-0.624843	NA	1	0.892209	0.823423	NA	0.913	NA	8.6523244
787	3	47125385	47125385	G	A	exonic	SETD2	NA	nonsynonymous SNV	SETD2:NM_014159:exon12:c.C5885T:p.P1962L	exonic	ENSG00000181555	NA	nonsynonymous SNV	ENSG00000181555:ENST00000409792:exon12:c.C5885T:p.P1962L	Score=289;Name=lod=20	NA	3p21.31	NA	NA	Name=13	NA	rs4082155	0.5	0.5	0.452	0.469848	0.5825	0.5327	0.5187	0.236	0.5706	0.58	0.53	0.54	0.29	0.5342	0.58	0.6	T	0.001	B	0.002	B	0.655	N	0.090	P	0.345	N	1.98	T	-0.947	T	0.000	T	0.195	1.669	11.54	2.94	0.333	0.529	5.284	1.669445	1.669445	0.01	0.566163	0.286201	ID=COSM149376,COSM149375;OCCURENCE=1(stomach)	0.522	NA	8.6504704
787	17	10538728	10538728	G	A	exonic	MYH3	NA	synonymous SNV	MYH3:NM_002470:exon30:c.C4128T:p.Y1376Y	exonic	ENSG00000109063	NA	synonymous SNV	ENSG00000109063:ENST00000226209:exon29:c.C4128T:p.Y1376Y,ENSG00000109063:ENST00000583535:exon30:c.C4128T:p.Y1376Y	NA	NA	17p13.1	NA	Name=CTCF,CTCF_(SC-5916)	Name=3	NA	rs112569418	0.01	0.01	0.014	0.0165735	0.003	NA	0.013	0.0484	0.0072	0.004	NA	0.02	0.04	0.0085	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.201406	NA	NA	0.005116	0.037222	ID=COSM1640586;OCCURENCE=1(stomach)	0.014	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117673.2;CLNDSDB=.;CLNDSDBID=.	8.6500506
787	20	55748206	55748206	G	A	intronic	BMP7	NA	NA	NA	exonic	ENSG00000101144	NA	nonsynonymous SNV	ENSG00000101144:ENST00000450594:exon6:c.C1196T:p.A399V	NA	NA	20q13.31	NA	Name=Egr-1	NA	NA	rs2148328	0.47	0.47	0.414	0.407548	0.4881	0.6667	0.4452	0.1959	0.317	0.51	0.67	0.45	0.18	0.5251	0.67	1	T	0.0	B	0.0	B	.	.	1.000	P	.	.	-1.29	T	-1.004	T	0.000	T	0.036	0.605	7.262	-7.72	-2.950	-1.635	0.715	0.605402	NA	0.52	0.50407	0.248865	NA	0.304	NA	8.6493967
787	6	31106489	31106489	G	A	exonic	PSORS1C1	NA	nonsynonymous SNV	PSORS1C1:NM_014068:exon5:c.G100A:p.E34K	exonic	ENSG00000204540	NA	nonsynonymous SNV	ENSG00000204540:ENST00000259881:exon5:c.G100A:p.E34K	NA	NA	6p21.33	NA	NA	NA	NA	rs1265096	0.03	0.03	0.023	0.0169728	0.0656	NA	0.0115	0.0053	0.0041	0.08	NA	0.01	0.01	0.0519	0.08	0.33	T	0.838	P	0.101	B	.	.	1.000	N	0	N	2.52	T	-0.933	T	0.004	T	0.059	1.278	10.18	0.351	-0.095	-2.035	4.938	1.27814	1.27814	0.4	0.06663	0.016545	NA	0.072	NA	8.6492034
787	9	134385435	134385435	C	T	exonic	POMT1	NA	stopgain	POMT1:NM_007171:exon8:c.C751T:p.Q251X	exonic	ENSG00000130714	NA	stopgain	ENSG00000130714:ENST00000441334:exon6:c.C400T:p.Q134X,ENSG00000130714:ENST00000448212:exon7:c.C589T:p.Q197X,ENSG00000130714:ENST00000372228:exon8:c.C751T:p.Q251X	NA	NA	9q34.13	NA	NA	NA	NA	rs3887873	0.07	0.07	0.051	0.0786741	0.1461	0.001	0.0793	0.1248	0.0266	0.11	0.0017	0.08	0.07	0.1035	0.11	.	.	.	.	.	.	0.001	U	0.000	P	.	.	.	.	.	.	.	.	.	1.822	12.05	-1.1	-0.288	-0.097	2.810	1.821679	1.821679	0.8	0.101279	0.08965	NA	NA	CLINSIG=other|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=mult|single;CLNACC=RCV000081492.3|RCV000127574.1;CLNDSDB=.|.;CLNDSDBID=.|.	8.649121
787	9	140611121	140611121	A	T	exonic	EHMT1	NA	synonymous SNV	EHMT1:NM_001145527:exon3:c.A129T:p.A43A,EHMT1:NM_024757:exon3:c.A129T:p.A43A	exonic	ENSG00000181090	NA	synonymous SNV	ENSG00000181090:ENST00000334856:exon3:c.A36T:p.A12A,ENSG00000181090:ENST00000460843:exon3:c.A129T:p.A43A,ENSG00000181090:ENST00000462484:exon3:c.A129T:p.A43A	Score=387;Name=lod=50	NA	9q34.3	NA	NA	Name=6	NA	rs76684726	0.03	0.03	0.034	0.0473243	0.004	NA	0.0187	0.1664	NA	NA	NA	0.01	0.14	0.0146	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.443826	1.443826	NA	0.002094	0.126192	NA	0.029	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000082215.3;CLNDSDB=.;CLNDSDBID=.	8.6459726
787	6	33281505	33281505	C	A	exonic	TAPBP	NA	synonymous SNV	TAPBP:NM_003190:exon2:c.G174T:p.P58P,TAPBP:NM_172208:exon2:c.G174T:p.P58P,TAPBP:NM_172209:exon2:c.G174T:p.P58P	exonic	ENSG00000231925	NA	synonymous SNV	ENSG00000231925:ENST00000426633:exon2:c.G174T:p.P58P,ENSG00000231925:ENST00000434618:exon2:c.G174T:p.P58P,ENSG00000231925:ENST00000456592:exon2:c.G174T:p.P58P,ENSG00000231925:ENST00000475304:exon2:c.G174T:p.P58P,ENSG00000231925:ENST00000489157:exon2:c.G174T:p.P58P	NA	NA	6p21.32	Score=829;Name=V$EGR1_01	Name=EBF,Pol2,TBP,BAF155,CEBPB,EBF1_(C-8)	Name=111	NA	rs45501592	0.0014	0.0014	0.003	0.00339457	0.0089	NA	0.0029	0.0008	0.0051	0.004	NA	NA	NA	0.0051	0.0076	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.104785	NA	NA	0.007572	0.001366	NA	NA	NA	8.6450946
788	9	140707889	140707889	G	A	exonic	EHMT1	NA	synonymous SNV	EHMT1:NM_024757:exon21:c.G3087A:p.V1029V	exonic	ENSG00000181090	NA	synonymous SNV	ENSG00000181090:ENST00000462942:exon16:c.G1944A:p.V648V,ENSG00000181090:ENST00000460843:exon21:c.G3087A:p.V1029V	Score=358;Name=lod=38	NA	9q34.3	NA	Name=BCL3	NA	NA	rs11137244	0.04	0.04	0.034	0.0541134	0.004	NA	0.0202	0.1914	NA	NA	NA	0.02	0.15	0.0156	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.307439	NA	NA	0.002326	0.145483	NA	0.036	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116961.2;CLNDSDB=.;CLNDSDBID=.	8.6447406
788	6	29911190	29911190	G	A	exonic	HLA-A	NA	synonymous SNV	HLA-A:NM_001242758:exon3:c.G489A:p.A163A,HLA-A:NM_002116:exon3:c.G489A:p.A163A	exonic	ENSG00000206503	NA	synonymous SNV	ENSG00000206503:ENST00000376802:exon3:c.G489A:p.A163A,ENSG00000206503:ENST00000376806:exon3:c.G489A:p.A163A,ENSG00000206503:ENST00000376809:exon3:c.G489A:p.A163A,ENSG00000206503:ENST00000396634:exon5:c.G489A:p.A163A	NA	NA	6p22.1	NA	Name=Pol2-4H8	Name=10	NA	rs1059514	0.48	0.48	0.325	0.483227	0.5209	0.5675	0.4885	0.3525	0.5307	0.54	0.51	0.41	0.38	0.5036	0.54	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	-0.462	1.866	-0.398	0.021	-1.205	5.502	-0.461526	NA	NA	NA	NA	NA	0.457	NA	8.6421666
788	11	118404196	118404196	A	C	exonic	TMEM25	NA	synonymous SNV	TMEM25:NM_001144037:exon5:c.A735C:p.A245A,TMEM25:NM_032780:exon5:c.A735C:p.A245A	exonic	ENSG00000149582	NA	synonymous SNV	ENSG00000149582:ENST00000528373:exon4:c.A444C:p.A148A,ENSG00000149582:ENST00000544878:exon4:c.A444C:p.A148A,ENSG00000149582:ENST00000313236:exon5:c.A735C:p.A245A,ENSG00000149582:ENST00000354284:exon5:c.A735C:p.A245A,ENSG00000149582:ENST00000533102:exon5:c.A735C:p.A245A	Score=510;Name=lod=157	NA	11q23.3	NA	NA	NA	NA	rs7129371	0.06	0.06	0.06	0.0666933	0.005	NA	0.0259	0.2352	NA	0.004	NA	0.02	0.22	0.0183	0.22	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.027	T	0.000	T	.	1.559	11.17	2.92	0.388	0.089	2.679	1.559104	1.559104	NA	0.001746	0.180455	NA	0.051	NA	8.6416206
788	10	115922774	115922774	G	A	exonic	C10orf118	NA	nonsynonymous SNV	C10orf118:NM_018017:exon2:c.C254T:p.T85I	exonic	ENSG00000165813	NA	nonsynonymous SNV	ENSG00000165813:ENST00000369286:exon2:c.C254T:p.T85I,ENSG00000165813:ENST00000369287:exon2:c.C254T:p.T85I,ENSG00000165813:ENST00000369285:exon3:c.C254T:p.T85I	NA	NA	10q25.3	NA	NA	NA	NA	rs1061159	0.21	0.21	0.223	0.207268	0.2505	0.0585	0.2349	0.3434	0.1125	0.24	0.06	0.25	0.31	0.206	0.32	0.43	T	0.0	B	0.0	B	0.482	N	1.000	P	0.55	N	1.87	T	-1.024	T	0.000	T	0.017	-1.196	0.074	-9.53	-1.547	-0.821	19.155	-1.196215	NA	0.27	0.235349	0.316614	NA	0.167	NA	8.6414844
788	12	111884608	111884608	T	C	exonic	SH2B3	NA	nonsynonymous SNV	SH2B3:NM_005475:exon3:c.T784C:p.W262R	exonic	ENSG00000111252	NA	nonsynonymous SNV	ENSG00000111252:ENST00000538307:exon2:c.T178C:p.W60R,ENSG00000111252:ENST00000341259:exon3:c.T784C:p.W262R	NA	Name=Rheumatoid arthritis,Type 1 diabetes,Beta-2 microglubulin plasma levels,Hypothyroidism,Type 1 diabetes autoantibodies,Systolic blood pressure,Diastolic blood pressure,Eosinophil counts,Coronary heart disease,Red blood cell traits,Platelet counts	12q24.12	NA	NA	Name=2	NA	rs3184504	0.78	0.78	0.78	0.852636	0.5358	0.997	0.7464	0.9811	0.9315	0.53	0.99	0.7	0.97	0.6625	0.99	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-1.845	N	1.66	T	-0.956	T	0.000	T	0.044	-2.191	0.005	2.97	0.533	0.339	8.173	-2.191368	NA	1	0.494651	0.906037	NA	0.783	NA	8.6403824
788	14	20837701	20837701	G	C	exonic	TEP1	NA	nonsynonymous SNV	TEP1:NM_007110:exon53:c.C7458G:p.I2486M	exonic	ENSG00000129566	NA	nonsynonymous SNV	ENSG00000129566:ENST00000553365:exon6:c.C575G:p.S192C,ENSG00000129566:ENST00000555008:exon41:c.C5487G:p.I1829M,ENSG00000129566:ENST00000556935:exon51:c.C7134G:p.I2378M,ENSG00000129566:ENST00000262715:exon53:c.C7458G:p.I2486M	Score=343;Name=lod=33	NA	14q11.2	NA	NA	NA	NA	rs938886	0.33	0.33	0.326	0.339257	0.2237	0.3065	0.3718	0.5129	0.2342	0.23	0.3	0.33	0.5	0.2626	0.5	0.48	T	0.0	B	0.002	B	0.052	N	0.000	P	-1.04	N	1.26	T	-0.970	T	0.000	T	0.193	-0.669	1.075	2.82	0.788	0.569	9.062	-0.668871	NA	1	0.206977	0.436904	NA	0.261	NA	8.6400564
788	7	129664312	129664312	T	C	exonic	ZC3HC1	NA	nonsynonymous SNV	ZC3HC1:NM_016478:exon7:c.A811G:p.T271A	exonic	ENSG00000091732	NA	nonsynonymous SNV	ENSG00000091732:ENST00000358303:exon7:c.A811G:p.T271A,ENSG00000091732:ENST00000360708:exon7:c.A811G:p.T271A,ENSG00000091732:ENST00000311873:exon8:c.A748G:p.T250A	NA	NA	7q32.2	Score=959;Name=V$GATA1_05	Name=eGFP-JunB,eGFP-JunD	NA	NA	rs1464890	0.5	0.5	0.482	0.476038	0.6054	0.6696	0.5648	0.1044	0.5828	0.6	0.7	0.51	0.12	0.5295	0.7	0.68	T	0.007	B	0.014	B	0.000	D	1.000	P	0.885	L	1.01	T	-0.945	T	0.000	T	0.086	0.736	7.909	-0.152	0.344	-0.271	2.440	0.735976	NA	0.3	0.558488	0.172719	NA	0.355	NA	8.6399454
788	19	9492370	9492370	A	T	exonic	ZNF177,ZNF559-ZNF177	NA	nonsynonymous SNV	ZNF177:NM_001172651:exon6:c.A1363T:p.I455F,ZNF177:NM_003451:exon9:c.A883T:p.I295F,ZNF559-ZNF177:NM_001172650:exon12:c.A883T:p.I295F	exonic	ENSG00000188629,ENSG00000270011	NA	nonsynonymous SNV	ENSG00000188629:ENST00000434737:exon5:c.A1363T:p.I455F,ENSG00000188629:ENST00000589262:exon6:c.A1363T:p.I455F,ENSG00000188629:ENST00000343499:exon9:c.A883T:p.I295F,ENSG00000270011:ENST00000541595:exon12:c.A883T:p.I295F,ENSG00000188629:ENST00000602738:exon12:c.A883T:p.I295F	NA	NA	19p13.2	NA	Name=ZNF274,SETDB1	Name=6	NA	rs2230752	0.53	0.53	0.526	0.54373	0.5606	0.4504	0.5375	0.59	0.5644	0.55	0.42	0.57	0.59	0.5514	0.6	0.08	T	0.058	B	0.018	B	.	.	0.972	P	0.44	N	3.18	T	-0.985	T	0.000	T	0.095	1.058	9.323	-1.55	-0.434	-4.502	0.286	1.058455	NA	0.06	0.581744	0.603949	ID=COSM148502,COSM1129633;OCCURENCE=1(stomach),1(prostate)	0.652	NA	8.6395894
788	4	1656801	1656801	A	C	exonic	FAM53A	NA	synonymous SNV	FAM53A:NM_001013622:exon4:c.T786G:p.P262P,FAM53A:NM_001174070:exon4:c.T786G:p.P262P	exonic	ENSG00000174137	NA	synonymous SNV	ENSG00000174137:ENST00000461064:exon3:c.T786G:p.P262P,ENSG00000174137:ENST00000308132:exon4:c.T786G:p.P262P,ENSG00000174137:ENST00000472884:exon4:c.T786G:p.P262P,ENSG00000174137:ENST00000489363:exon4:c.T786G:p.P262P	NA	NA	4p16.3	NA	NA	NA	NA	rs62287700	0.22	0.22	0.216	0.232628	0.3698	0.0615	0.2305	0.1271	0.4121	0.37	0.05	0.28	0.14	0.3176	0.37	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.077	T	0.000	T	.	-1.245	0.053	-9.02	-6.035	-3.903	1.607	-1.245306	NA	NA	0.339851	0.15168	ID=COSM447575;OCCURENCE=1(breast)	0.109	NA	8.6394156
788	22	38028046	38028046	C	T	exonic	GGA1	NA	synonymous SNV	GGA1:NM_001001560:exon13:c.C1311T:p.R437R,GGA1:NM_001172687:exon15:c.C1560T:p.R520R,GGA1:NM_013365:exon15:c.C1572T:p.R524R,GGA1:NM_001172688:exon16:c.C1353T:p.R451R	exonic	ENSG00000100083	NA	synonymous SNV	ENSG00000100083:ENST00000325180:exon13:c.C1311T:p.R437R,ENSG00000100083:ENST00000337437:exon14:c.C1473T:p.R491R,ENSG00000100083:ENST00000343632:exon15:c.C1572T:p.R524R,ENSG00000100083:ENST00000381756:exon15:c.C1623T:p.R541R,ENSG00000100083:ENST00000406772:exon16:c.C1353T:p.R451R	Score=545;Name=lod=219	NA	22q13.1	NA	Name=HEY1,SP1,TAF1,GABP,p300	Name=13	NA	rs55740624	0.0046	0.0046	0	0.00299521	0.006	NA	0.0086	NA	0.0031	0.01	NA	0.02	NA	0.0069	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.083352	NA	NA	0.014535	0.002043	NA	0.007	NA	8.6392316
788	10	116008497	116008497	G	A	exonic	VWA2	NA	nonsynonymous SNV	VWA2:NM_001272046:exon2:c.G25A:p.A9T	exonic	ENSG00000165816	NA	nonsynonymous SNV	ENSG00000165816:ENST00000392982:exon2:c.G25A:p.A9T,ENSG00000165816:ENST00000603594:exon2:c.G25A:p.A9T	NA	NA	10q25.3	NA	Name=MafK_(ab50322)	NA	NA	rs9664945	0.2	0.2	0.192	0.203275	0.2515	0.0605	0.2176	0.3396	0.1063	0.24	0.06	0.24	0.28	0.2053	0.31	0.55	T	0.001	B	0.005	B	0.575	N	1.000	P	1.445	L	-0.39	T	-1.040	T	0.000	T	0.09	-0.048	3.769	3.07	0.600	0.762	7.135	-0.047993	NA	0.36	0.237558	0.308897	NA	0.159	NA	8.6389754
788	11	20623023	20623023	C	T	exonic	SLC6A5	NA	synonymous SNV	SLC6A5:NM_004211:exon2:c.C352T:p.L118L	exonic	ENSG00000165970	NA	synonymous SNV	ENSG00000165970:ENST00000298923:exon2:c.C352T:p.L118L,ENSG00000165970:ENST00000525748:exon2:c.C352T:p.L118L	Score=383;Name=lod=48	Name=Obesity-related traits	11p15.1	NA	Name=Rad21	Name=4	NA	rs2241941	0.36	0.36	0.29	0.326877	0.3489	0.3641	0.3199	0.326	0.272	0.37	0.41	0.35	0.29	0.3503	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.001901	NA	NA	0.329263	0.315252	NA	0.181	NA	8.6382036
788	11	681078	681078	G	C	exonic	DEAF1	NA	synonymous SNV	DEAF1:NM_021008:exon7:c.C882G:p.V294V	exonic	ENSG00000177030	NA	synonymous SNV	ENSG00000177030:ENST00000382409:exon7:c.C882G:p.V294V	Score=489;Name=lod=129	NA	11p15.5	Score=788;Name=V$SRF_C	Name=USF-1	NA	NA	rs35887544	0.01	0.01	NA	0.00259585	0.007	NA	0.0072	0.0008	NA	0.01	NA	0.01	0.002	0.0086	0.015	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.533078	NA	NA	0.014767	0.00227	NA	0.007	NA	8.6362996
788	6	72967952	72967952	G	A	exonic	RIMS1	NA	synonymous SNV	RIMS1:NM_001168407:exon12:c.G1314A:p.P438P,RIMS1:NM_001168408:exon12:c.G1317A:p.P439P,RIMS1:NM_001168409:exon12:c.G1074A:p.P358P,RIMS1:NM_001168410:exon12:c.G1272A:p.P424P,RIMS1:NM_014989:exon17:c.G2895A:p.P965P	exonic	ENSG00000079841	NA	synonymous SNV	ENSG00000079841:ENST00000370420:exon5:c.G570A:p.P190P,ENSG00000079841:ENST00000401910:exon12:c.G1314A:p.P438P,ENSG00000079841:ENST00000425662:exon12:c.G1074A:p.P358P,ENSG00000079841:ENST00000453976:exon12:c.G1074A:p.P358P,ENSG00000079841:ENST00000517827:exon12:c.G1272A:p.P424P,ENSG00000079841:ENST00000523963:exon12:c.G1317A:p.P439P,ENSG00000079841:ENST00000264839:exon17:c.G2895A:p.P965P,ENSG00000079841:ENST00000348717:exon17:c.G2892A:p.P964P,ENSG00000079841:ENST00000491071:exon17:c.G2895A:p.P965P,ENSG00000079841:ENST00000517960:exon17:c.G2892A:p.P964P,ENSG00000079841:ENST00000518273:exon17:c.G2895A:p.P965P,ENSG00000079841:ENST00000520567:exon17:c.G2892A:p.P964P,ENSG00000079841:ENST00000521978:exon17:c.G2895A:p.P965P,ENSG00000079841:ENST00000522291:exon17:c.G2892A:p.P964P	Score=697;Name=lod=907	NA	6q13	NA	NA	NA	NA	rs41265493	0.0046	0.0046	0.004	0.00479233	0.0139	NA	0.0014	NA	0.0092	0.01	NA	0.0028	NA	0.0079	0.011	.	.	.	.	.	.	.	.	1.000	D	.	.	.	.	-1.027	T	0.061	T	.	0.898	8.65	-0.137	-0.036	0.388	1.888	0.898107	NA	NA	0.009768	0.002564	NA	0.007	NA	8.6350986
789	22	30776095	30776095	C	T	exonic	RNF215	NA	nonsynonymous SNV	RNF215:NM_001017981:exon7:c.G964A:p.A322T	exonic	ENSG00000099999	NA	nonsynonymous SNV	ENSG00000099999:ENST00000382363:exon7:c.G964A:p.A322T	NA	NA	22q12.2	NA	NA	NA	NA	rs5749088	0.16	0.16	0.145	0.131589	0.2545	0.1438	0.1556	0.0522	0.0828	0.24	0.12	0.16	0.06	0.1897	0.26	0.5	T	0.0	B	0.0	B	0.443	N	1.000	P	0	N	2.13	T	-0.958	T	0.000	T	0.167	0.027	4.152	-6.25	-1.111	0.008	2.193	0.026624	NA	0.39	0.255581	0.083976	NA	0.239	NA	8.6335524
789	1	214830617	214830617	A	G	exonic	CENPF	NA	nonsynonymous SNV	CENPF:NM_016343:exon18:c.A8827G:p.R2943G	exonic	ENSG00000117724	NA	nonsynonymous SNV	ENSG00000117724:ENST00000366955:exon18:c.A8827G:p.R2943G	NA	Name=Response to antineoplastic agents	1q41	NA	NA	NA	NA	rs438034	0.62	0.62	0.591	0.618411	0.5606	0.8879	0.6383	0.354	0.7434	0.58	0.92	0.61	0.35	0.5987	0.92	0.39	T	0.0	B	0.0	B	0.879	N	1.000	P	-0.755	N	4.17	T	-1.060	T	0.000	T	0.027	1.777	11.9	2.52	0.331	1.447	7.878	1.777316	1.777316	0.6	0.540581	0.397186	NA	0.507	NA	8.6334524
789	5	640705	640705	A	G	exonic	CEP72	NA	nonsynonymous SNV	CEP72:NM_018140:exon9:c.A1525G:p.T509A	exonic	ENSG00000112877	NA	nonsynonymous SNV	ENSG00000112877:ENST00000264935:exon9:c.A1525G:p.T509A	NA	NA	5p15.33	NA	NA	NA	NA	rs868649	0.28	0.28	0.256	0.26877	0.2286	0.4683	0.2507	0.2579	0.1319	0.23	0.42	0.25	0.24	0.2456	0.42	0.55	T	0.002	B	0.003	B	0.006	N	1.000	P	0.72	N	1.39	T	-0.905	T	0.000	T	0.018	-0.044	3.791	-2.31	-0.271	-2.852	10.959	-0.043731	NA	0.31	0.226279	0.199274	NA	0.232	NA	8.6328544
789	6	30888161	30888161	T	C	exonic	VARS2	NA	nonsynonymous SNV	VARS2:NM_001167733:exon13:c.T925C:p.W309R,VARS2:NM_001167734:exon14:c.T1435C:p.W479R,VARS2:NM_020442:exon14:c.T1345C:p.W449R	exonic	ENSG00000137411	NA	nonsynonymous SNV	ENSG00000137411:ENST00000321897:exon13:c.T1345C:p.W449R,ENSG00000137411:ENST00000542001:exon13:c.T925C:p.W309R,ENSG00000137411:ENST00000416670:exon14:c.T1345C:p.W449R,ENSG00000137411:ENST00000541562:exon14:c.T1435C:p.W479R	Score=423;Name=lod=70	NA	6p21.33	NA	NA	NA	NA	rs2249464	0.58	0.58	0.52	0.616214	0.5596	0.8413	0.6297	0.3593	0.7802	0.58	0.8	0.6	0.3	0.6011	0.8	0.84	T	0.0	B	0.0	B	0.003	N	1.000	P	-2.505	N	1.42	T	-0.954	T	0.004	T	0.113	-1.278	0.043	4.27	0.943	1.299	5.839	-1.278043	NA	1	0.540116	0.371993	NA	0.609	NA	8.6325174
789	3	10028220	10028220	C	T	exonic	EMC3	NA	synonymous SNV	EMC3:NM_018447:exon1:c.G126A:p.K42K	exonic	ENSG00000125037	NA	synonymous SNV	ENSG00000125037:ENST00000245046:exon1:c.G126A:p.K42K,ENSG00000125037:ENST00000429759:exon1:c.G126A:p.K42K,ENSG00000125037:ENST00000470827:exon2:c.G126A:p.K42K	Score=694;Name=lod=882	NA	3p25.3	NA	Name=Pol2	Name=148	NA	rs146540747	0.01	0.01	0.005	0.00339457	0.0129	NA	0.0058	NA	NA	0.02	NA	0.01	NA	0.0087	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.759063	1.759063	NA	0.013023	0.002724	NA	NA	NA	8.6320436
789	10	72195439	72195439	T	C	exonic	NODAL	NA	nonsynonymous SNV	NODAL:NM_018055:exon2:c.A494G:p.H165R	exonic	ENSG00000156574,ENSG00000197604	NA	nonsynonymous SNV	ENSG00000197604:ENST00000420338:exon1:c.T386C:p.V129A,ENSG00000156574:ENST00000287139:exon2:c.A494G:p.H165R,ENSG00000156574:ENST00000414871:exon2:c.A329G:p.H110R	NA	NA	10q22.1	Score=767;Name=V$ROAZ_01	NA	NA	NA	rs1904589	0.66	0.66	0.644	0.665735	0.5308	0.9563	0.6816	0.5113	0.7025	0.54	0.95	0.67	0.48	0.6171	0.95	0.54	T	0.0	B	0.0	B	0.728	N	1.000	P	1.15	L	-0.07	T	-1.036	T	0.000	T	0.017	-0.346	2.365	-2.83	-0.447	0.049	4.011	-0.345616	NA	0.28	0.555233	0.506128	NA	0.594	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000081930.1;CLNDSDB=.;CLNDSDBID=.	8.6302004
789	9	125330678	125330678	T	G	exonic	OR1L8	NA	nonsynonymous SNV	OR1L8:NM_001004454:exon1:c.A79C:p.T27P	exonic	ENSG00000171496	NA	nonsynonymous SNV	ENSG00000171496:ENST00000304865:exon1:c.A79C:p.T27P	Score=278;Name=lod=18	NA	9q33.2	Score=835;Name=V$FAC1_01	NA	NA	NA	rs10985704	0.68	0.68	0.688	0.665136	0.5477	0.9792	0.6225	0.5991	0.5818	0.53	0.99	0.63	0.6	0.5965	0.99	0.29	T	0.0	B	0.0	B	0.065	N	1.000	P	-1.405	N	7.42	T	-0.877	T	0.000	T	0.064	0.988	9.033	3.48	0.618	-0.663	12.513	0.987675	NA	0.22	0.560349	0.588289	NA	0.514	NA	8.6287844
789	1	183085755	183085755	A	G	exonic	LAMC1	NA	nonsynonymous SNV	LAMC1:NM_002293:exon7:c.A1372G:p.I458V	exonic	ENSG00000135862	NA	nonsynonymous SNV	ENSG00000135862:ENST00000258341:exon7:c.A1372G:p.I458V	NA	NA	1q25.3	NA	NA	Name=15	NA	rs20563	0.53	0.53	0.514	0.531749	0.5636	0.628	0.6254	0.3321	0.6033	0.57	0.58	0.58	0.38	0.5725	0.58	1	T	0.0	B	0.0	B	0.010	N	1.000	P	-1.33	N	0.15	T	-1.041	T	0.000	T	0.033	-0.567	1.444	-4.2	-1.286	-0.034	6.730	-0.566876	NA	1	0.569535	0.374489	NA	0.464	NA	8.6276984
789	6	2679676	2679676	G	A	intronic	MYLK4	NA	NA	NA	exonic	ENSG00000145949	NA	nonsynonymous SNV	ENSG00000145949:ENST00000268446:exon8:c.C725T:p.T242M	NA	NA	6p25.2	NA	NA	NA	NA	rs12523992	0.23	0.23	0.22	0.226238	0.174	0.4236	0.255	0.0643	0.2751	0.18	0.44	0.19	0.09	0.2065	0.44	.	.	.	.	.	.	.	.	1.000	P	.	.	1.11	T	-0.998	T	0.017	T	0.075	0.793	8.177	-3.9	-1.002	-1.086	0.177	0.792989	NA	0	0.158953	0.084884	NA	0.21	NA	8.6272137
789	1	47607281	47607281	C	T	exonic	CYP4A22	NA	nonsynonymous SNV	CYP4A22:NM_001010969:exon3:c.C376T:p.R126W	exonic	ENSG00000162365	NA	nonsynonymous SNV	ENSG00000162365:ENST00000294337:exon3:c.C376T:p.R126W,ENSG00000162365:ENST00000371890:exon3:c.C376T:p.R126W,ENSG00000162365:ENST00000371891:exon3:c.C376T:p.R126W	Score=387;Name=lod=50	NA	1p33	NA	NA	NA	NA	rs12564525	0.31	0.31	0.318	0.371206	0.2058	0.6141	0.2867	0.2254	0.5481	0.19	0.6	0.25	0.21	0.2919	0.6	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-3.465	N	-0.27	T	-0.903	T	0.000	T	0.154	-0.783	0.721	1.66	0.117	2.836	6.861	-0.783423	NA	1	0.209535	0.249433	NA	0.239	NA	8.6260984
789	12	101560328	101560328	C	A	exonic	SLC5A8	NA	nonsynonymous SNV	SLC5A8:NM_145913:exon12:c.G1470T:p.M490I	exonic	ENSG00000256870	NA	nonsynonymous SNV	ENSG00000256870:ENST00000536262:exon12:c.G1470T:p.M490I	NA	NA	12q23.1	NA	NA	NA	NA	rs164365	0.27	0.27	0.282	0.260383	0.2485	0.5437	0.1268	0.149	0.226	0.23	0.53	0.15	0.13	0.2345	0.53	0.49	T	0.002	B	0.002	B	0.681	N	1.000	P	0.805	L	0.02	T	-0.897	T	0.000	T	0.079	-0.865	0.514	2.95	2.530	0.204	3.719	-0.86525	NA	0.55	0.224651	0.135497	NA	0.203	NA	8.6256824
790	2	242149010	242149010	C	T	exonic	ANO7	NA	nonsynonymous SNV	ANO7:NM_001001891:exon13:c.C1481T:p.A494V	exonic	ENSG00000146205	NA	nonsynonymous SNV	ENSG00000146205:ENST00000274979:exon13:c.C1481T:p.A494V,ENSG00000146205:ENST00000402430:exon13:c.C1478T:p.A493V	NA	NA	2q37.3	NA	Name=CTCF	NA	NA	rs57677160	0.14	0.14	0.143	0.123003	0.2565	0.0159	0.1571	0.0998	0.1033	0.25	0.01	0.16	0.11	0.2022	0.26	0.74	T	0.0	B	0.002	B	0.000	N	1.000	P	-0.235	N	-0.02	T	-1.081	T	0.000	T	0.022	-0.525	1.607	-0.242	-0.078	2.903	7.185	-0.525135	NA	0.6	0.256163	0.126192	NA	0.123	NA	8.6184704
790	21	28210030	28210030	A	G	exonic	ADAMTS1	NA	synonymous SNV	ADAMTS1:NM_006988:exon9:c.T2772C:p.C924C	exonic	ENSG00000154734	NA	synonymous SNV	ENSG00000154734:ENST00000284984:exon9:c.T2772C:p.C924C	Score=563;Name=lod=259	NA	21q21.3	NA	Name=CTCF	Name=20	NA	rs3183693	0.01	0.01	0.005	0.00559105	0.0189	NA	0.013	NA	NA	0.01	NA	0.02	NA	0.0109	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.123981	NA	NA	0.019419	0.00227	NA	NA	NA	8.6174476
790	3	118945796	118945796	G	C	exonic	B4GALT4	NA	nonsynonymous SNV	B4GALT4:NM_003778:exon4:c.C346G:p.Q116E,B4GALT4:NM_212543:exon5:c.C346G:p.Q116E	exonic	ENSG00000121578	NA	nonsynonymous SNV	ENSG00000121578:ENST00000479150:exon3:c.C346G:p.Q116E,ENSG00000121578:ENST00000480814:exon3:c.C346G:p.Q116E,ENSG00000121578:ENST00000393765:exon4:c.C346G:p.Q116E,ENSG00000121578:ENST00000467604:exon4:c.C346G:p.Q116E,ENSG00000121578:ENST00000483209:exon4:c.C346G:p.Q116E,ENSG00000121578:ENST00000359213:exon5:c.C346G:p.Q116E,ENSG00000121578:ENST00000475803:exon5:c.C346G:p.Q116E	NA	NA	3q13.32	NA	NA	NA	NA	rs3764779	0.28	0.28	0.287	0.296925	0.1978	0.3333	0.353	0.3064	0.3088	0.2	0.34	0.33	0.3	0.2715	0.34	1	T	0.0	B	0.0	B	0.000	N	0.719	P	-1.77	N	2.05	T	-0.988	T	0.000	T	0.194	-1.884	0.008	5.1	1.578	-0.256	10.875	-1.883719	NA	1	0.24686	0.319791	ID=COSM149449;OCCURENCE=1(stomach)	0.29	NA	8.6171734
790	3	195453434	195453434	G	A	exonic	MUC20	NA	nonsynonymous SNV	MUC20:NM_001098516:exon2:c.G1342A:p.V448M,MUC20:NM_152673:exon3:c.G1447A:p.V483M	exonic	ENSG00000176945	NA	nonsynonymous SNV	ENSG00000176945:ENST00000445522:exon1:c.G1855A:p.V619M,ENSG00000176945:ENST00000436408:exon2:c.G1960A:p.V654M,ENSG00000176945:ENST00000447234:exon2:c.G1960A:p.V654M,ENSG00000176945:ENST00000320736:exon3:c.G1447A:p.V483M	NA	NA	3q29	NA	NA	NA	NA	rs113099255	0.07	0.07	0.051	NA	NA	NA	NA	NA	NA	0.13	0.0017	0.08	0.06	0.0932	0.13	0.09	T	0.985	D	0.71	P	0.097	N	1.000	N	0.975	L	2.93	T	-1.099	T	0.001	T	0.414	2.187	13.27	-1.74	-0.470	-0.217	0.392	2.187172	2.187172	0.11	0.123244	0.035524	ID=COSM1193888,COSM1193887;OCCURENCE=1(lung)	NA	NA	8.6168894
790	17	39240790	39240790	G	A	exonic	KRTAP4-7	NA	nonsynonymous SNV	KRTAP4-7:NM_033061:exon1:c.G332A:p.R111H	exonic	ENSG00000240871	NA	nonsynonymous SNV	ENSG00000240871:ENST00000391417:exon1:c.G332A:p.R111H	NA	NA	17q21.2	NA	NA	NA	NA	rs11650261	0.07	0.07	0.051	0.0684904	0.1153	0.0685	0.1196	0.0272	0.0399	0.09	0.04	0.09	0.04	0.1013	0.09	0.1	T	0.988	D	0.515	P	0.000	U	1.000	N	.	.	6.22	T	-0.935	T	0.000	T	0.21	0.46	6.498	-0.91	0.230	0.218	3.436	0.460116	NA	0.11	NA	NA	ID=COSM436553,COSM436552;OCCURENCE=1(breast)	NA	NA	8.6167334
791	4	169083694	169083694	A	C	exonic	ANXA10	NA	nonsynonymous SNV	ANXA10:NM_007193:exon4:c.A211C:p.M71L	exonic	ENSG00000109511	NA	nonsynonymous SNV	ENSG00000109511:ENST00000359299:exon4:c.A211C:p.M71L	Score=363;Name=lod=40	NA	4q32.3	NA	NA	NA	NA	rs6836994	0.51	0.51	0.529	0.533147	0.5944	0.2431	0.4697	0.7436	0.5297	0.58	0.24	0.53	0.7	0.5411	0.71	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-2.7	N	3.88	T	-1.018	T	0.000	T	0.069	-1.512	0.016	2.56	0.058	1.619	6.478	-1.511852	NA	1	0.583372	0.714707	ID=COSM149755;OCCURENCE=1(stomach)	0.42	NA	8.6144614
791	12	56600528	56600528	C	T	exonic	RNF41	NA	synonymous SNV	RNF41:NM_001242826:exon7:c.G657A:p.S219S,RNF41:NM_005785:exon7:c.G657A:p.S219S,RNF41:NM_194359:exon7:c.G657A:p.S219S,RNF41:NM_194358:exon8:c.G444A:p.S148S	exonic	ENSG00000181852	NA	synonymous SNV	ENSG00000181852:ENST00000345093:exon7:c.G657A:p.S219S,ENSG00000181852:ENST00000552656:exon7:c.G657A:p.S219S,ENSG00000181852:ENST00000394013:exon8:c.G444A:p.S148S	NA	NA	12q13.3	Score=726;Name=V$PAX4_04	Name=ZNF263,CTCF_(SC-5916),FOXA1_(C-20),CTCF_(C-20),SMC3_(ab9263),Znf143_(16618-1-AP),CTCF,FOXA1_(SC-101058),Rad21	Name=137	NA	rs703822	0.01	0.01	0.008	0.00658946	0.0209	0.001	0.013	NA	0.002	0.02	0.0017	0.02	0.002	0.014	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.735049	NA	NA	0.018721	0.004539	NA	NA	NA	8.6130456
791	5	170239112	170239112	C	A	exonic	GABRP	NA	nonsynonymous SNV	GABRP:NM_014211:exon10:c.C1173A:p.F391L	exonic	ENSG00000094755	NA	nonsynonymous SNV	ENSG00000094755:ENST00000265294:exon10:c.C1173A:p.F391L,ENSG00000094755:ENST00000518525:exon11:c.C1173A:p.F391L	Score=486;Name=lod=126	NA	5q35.1	NA	NA	NA	NA	rs1063310	0.26	0.26	0.257	0.223842	0.2565	0.2589	0.1398	0.2821	0.135	0.26	0.29	0.15	0.3	0.222	0.3	0.36	T	0.042	B	0.006	B	0.019	N	0.000	P	0.345	N	-1.33	T	-1.077	T	0.000	T	0.171	0.744	7.948	2.88	0.295	0.331	6.024	0.744234	NA	0.49	0.24407	0.303677	NA	0.268	NA	8.6107634
791	11	119063908	119063908	C	T	exonic	CCDC153	NA	nonsynonymous SNV	CCDC153:NM_001145018:exon5:c.G302A:p.R101H	exonic	ENSG00000248712	NA	nonsynonymous SNV	ENSG00000248712:ENST00000503566:exon4:c.G302A:p.R101H,ENSG00000248712:ENST00000415318:exon5:c.G302A:p.R101H	NA	NA	11q23.3	NA	NA	Name=2	NA	rs2301574	0.29	0.29	0.302	0.245008	0.2455	0.3542	0.2089	0.2595	0.138	0.25	0.37	0.23	0.31	0.2323	0.37	0.37	T	0.025	B	0.006	B	0.158	N	1.000	P	0.69	N	1.58	T	-0.903	T	0.000	T	0.041	-0.264	2.731	-0.122	0.088	-0.974	7.593	-0.264408	NA	0.08	0.248079	0.260573	ID=COSM147337;OCCURENCE=1(stomach)	0.42	NA	8.6074544
791	6	25813150	25813150	G	A	exonic	SLC17A1	NA	nonsynonymous SNV	SLC17A1:NM_005074:exon8:c.C806T:p.T269I	exonic	ENSG00000124568	NA	nonsynonymous SNV	ENSG00000124568:ENST00000244527:exon8:c.C806T:p.T269I,ENSG00000124568:ENST00000476801:exon8:c.C806T:p.T269I	NA	Name=Urate levels	6p22.2	NA	NA	NA	NA	rs1165196	0.74	0.74	0.728	0.71905	0.5646	0.8165	0.7003	0.9213	0.5174	0.57	0.84	0.69	0.92	0.6161	0.92	0.53	T	0.0	B	0.002	B	0.055	N	1.000	P	-0.99	N	0.51	T	-1.024	T	0.021	T	0.036	0.071	4.386	3.67	0.777	1.880	5.944	0.071267	NA	0.43	0.546279	0.861325	NA	0.623	NA	8.6063544
792	9	90501448	90501448	C	A	exonic	SPATA31E1	NA	nonsynonymous SNV	SPATA31E1:NM_178828:exon4:c.C2046A:p.D682E	exonic	ENSG00000177992	NA	nonsynonymous SNV	ENSG00000177992:ENST00000325643:exon4:c.C2046A:p.D682E	NA	NA	9q22.1	NA	NA	NA	NA	rs4076795	0.75	0.75	0.762	0.760783	0.5666	0.877	0.719	0.9493	0.6155	0.56	0.87	0.7	0.94	0.6224	0.94	1	T	0.0	B	0.0	B	0.002	N	1.000	P	-0.345	N	3.37	T	-0.995	T	0.000	T	0.001	-1.903	0.008	-4.86	-2.299	-2.165	5.925	-1.902883	NA	1	0.53966	0.879709	NA	0.71	NA	8.6046734
792	14	51446216	51446216	T	G	exonic	TRIM9	NA	nonsynonymous SNV	TRIM9:NM_015163:exon9:c.A1959C:p.L653F	exonic	ENSG00000100505	NA	nonsynonymous SNV	ENSG00000100505:ENST00000298355:exon9:c.A1959C:p.L653F,ENSG00000100505:ENST00000338969:exon12:c.A2202C:p.L734F	Score=488;Name=lod=128	NA	14q22.1	NA	NA	NA	NA	rs2275462	0.59	0.59	0.525	0.589856	0.5537	0.6925	0.7262	0.4372	0.6309	0.56	0.71	0.67	0.42	0.6074	0.71	0.66	T	0.058	B	0.105	B	0.000	N	0.000	P	1.265	L	-0.44	T	-0.904	T	0.000	T	0.065	2.877	15.58	3.54	1.035	0.502	1.085	2.876985	2.876985	0.08	0.567791	0.441217	NA	0.594	NA	8.6044424
792	1	177902725	177902725	C	T	exonic	SEC16B	NA	nonsynonymous SNV	SEC16B:NM_033127:exon21:c.G2618A:p.S873N	exonic	ENSG00000120341	NA	nonsynonymous SNV	ENSG00000120341:ENST00000308284:exon21:c.G2618A:p.S873N	NA	NA	1q25.2	NA	NA	NA	NA	rs3813649	0.21	0.21	0.202	0.219249	0.2604	0.1052	0.2594	0.2352	0.2444	0.25	0.12	0.25	0.2	0.2342	0.26	0.53	T	0.0	B	0.0	B	0.000	N	1.000	P	0	N	2.54	T	-1.013	T	0.000	T	0.002	-0.067	3.674	-10.2	-4.241	-1.654	2.855	-0.06693	NA	0.36	0.236077	0.260032	NA	0.297	NA	8.6026564
792	17	79478007	79478007	G	A	exonic	ACTG1	NA	synonymous SNV	ACTG1:NM_001199954:exon5:c.C930T:p.A310A,ACTG1:NM_001614:exon5:c.C930T:p.A310A	exonic	ENSG00000184009	NA	synonymous SNV	ENSG00000184009:ENST00000575842:exon4:c.C930T:p.A310A,ENSG00000184009:ENST00000331925:exon5:c.C930T:p.A310A,ENSG00000184009:ENST00000573283:exon5:c.C930T:p.A310A,ENSG00000184009:ENST00000575087:exon5:c.C930T:p.A310A,ENSG00000184009:ENST00000576544:exon5:c.C930T:p.A310A	Score=526;Name=lod=183	NA	17q25.3	NA	Name=ZBTB33,NRSF,Pol2,HEY1,Pol2(b),Sin3Ak-20,Pol2-4H8,CTCF_(SC-5916)	Name=121	NA	rs1135989	0.22	0.22	0.196	0.185304	0.3966	0.005	0.2522	0.1505	0.1534	0.39	0.0035	0.31	0.13	0.2882	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.845974	NA	NA	0.379419	0.193373	NA	0.167	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000037127.3;CLNDSDB=.;CLNDSDBID=.	8.6024476
792	3	158537443	158537443	A	G	exonic	MFSD1	NA	nonsynonymous SNV	MFSD1:NM_001167903:exon7:c.A688G:p.I230V,MFSD1:NM_022736:exon8:c.A805G:p.I269V	exonic	ENSG00000118855	NA	nonsynonymous SNV	ENSG00000118855:ENST00000477743:exon3:c.A160G:p.I54V,ENSG00000118855:ENST00000392813:exon7:c.A688G:p.I230V,ENSG00000118855:ENST00000264266:exon8:c.A658G:p.I220V,ENSG00000118855:ENST00000415822:exon8:c.A805G:p.I269V	NA	NA	3q25.32	Score=858;Name=V$ARNT_01	NA	Name=2	NA	rs3765083	0.56	0.56	0.584	0.559305	0.6083	0.372	0.5331	0.7247	0.4969	0.61	0.36	0.59	0.72	0.5606	0.72	0.91	T	0.001	B	0.004	B	0.001	N	0.988	P	0.805	L	0.36	T	-0.955	T	0.000	T	0.163	0.164	4.884	-2.1	-0.261	-0.188	6.853	0.164326	NA	0.39	0.56314	0.667045	NA	0.529	NA	8.6012934
792	10	46999604	46999604	A	G	exonic	GPRIN2	NA	nonsynonymous SNV	GPRIN2:NM_014696:exon3:c.A724G:p.R242G	exonic	ENSG00000204175	NA	nonsynonymous SNV	ENSG00000204175:ENST00000374314:exon1:c.A724G:p.R242G,ENSG00000204175:ENST00000374317:exon3:c.A724G:p.R242G	NA	NA	10q11.22	NA	NA	NA	NA	rs3127683	NA	NA	NA	0.807308	0.8469	0.9137	0.8516	0.6513	0.8364	NA	NA	NA	NA	0.8852	0.88	0.82	T	0.0	B	0.0	B	0.012	N	1.000	N	-1.7	N	4.09	T	-0.937	T	0.003	T	0.086	-1.936	0.007	5.12	1.321	2.529	10.186	-1.935806	NA	0.59	NA	NA	NA	0.87	NA	8.6012334
792	1	91781413	91781413	T	G	exonic	HFM1	NA	synonymous SNV	HFM1:NM_001017975:exon28:c.A3099C:p.I1033I	exonic	ENSG00000162669	NA	synonymous SNV	ENSG00000162669:ENST00000370424:exon24:c.A2136C:p.I712I,ENSG00000162669:ENST00000294696:exon28:c.A795C:p.I265I,ENSG00000162669:ENST00000370425:exon28:c.A3099C:p.I1033I	Score=623;Name=lod=455	NA	1p22.2	Score=796;Name=V$CDPCR3_01	NA	NA	NA	rs281992	0.75	0.75	0.726	0.762979	0.6928	0.8244	0.7233	0.7489	0.819	0.68	0.86	0.68	0.77	0.7059	0.86	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	0.733	7.896	4.09	0.800	1.237	9.494	0.733391	NA	NA	0.666744	0.729791	NA	0.688	NA	8.6012226
792	11	4790951	4790951	A	G	exonic	OR51F1	NA	nonsynonymous SNV	OR51F1:NM_001004752:exon1:c.T197C:p.F66S	exonic	ENSG00000188069	NA	nonsynonymous SNV	ENSG00000188069:ENST00000343430:exon1:c.T197C:p.F66S,ENSG00000188069:ENST00000380383:exon1:c.T218C:p.F73S	NA	NA	11p15.4	NA	NA	NA	NA	rs11033801	0.23	0.23	0.224	0.215655	0.2704	NA	0.2017	0.4569	0.0654	0.25	NA	0.23	0.46	0.2104	0.46	1	T	0.0	B	0.0	B	0.004	N	1.000	P	-1.895	N	7.37	T	-1.081	T	0.000	T	0.058	-1.368	0.026	4.81	1.271	0.483	7.393	-1.367725	NA	1	0.251745	0.446615	NA	0.29	NA	8.6007884
792	2	73679280	73679280	A	G	exonic	ALMS1	NA	nonsynonymous SNV	ALMS1:NM_015120:exon8:c.A5623G:p.I1875V	exonic	ENSG00000116127	NA	nonsynonymous SNV	ENSG00000116127:ENST00000423048:exon1:c.A457G:p.I153V,ENSG00000116127:ENST00000409009:exon7:c.A5497G:p.I1833V,ENSG00000116127:ENST00000264448:exon8:c.A5623G:p.I1875V,ENSG00000116127:ENST00000377715:exon8:c.A5623G:p.I1875V	NA	NA	2p13.1	NA	NA	NA	NA	rs6546838	0.33	0.33	0.36	0.358826	0.2276	0.0089	0.3919	0.8585	0.1554	0.23	0.01	0.35	0.85	0.2676	0.85	1	T	0.0	B	0.002	B	0.078	N	1.000	P	-1.04	N	3.53	T	-0.988	T	0.000	T	0.08	-1.607	0.013	-3.33	-0.997	-0.185	5.239	-1.607239	NA	1	0.238509	0.726395	NA	0.406	NA	8.5996244
792	4	1730254	1730254	A	G	exonic	TACC3	NA	synonymous SNV	TACC3:NM_006342:exon4:c.A1125G:p.Q375Q	exonic	ENSG00000013810	NA	synonymous SNV	ENSG00000013810:ENST00000313288:exon4:c.A1125G:p.Q375Q	NA	NA	4p16.3	NA	Name=HA-E2F1	NA	NA	rs798758	0.02	0.02	0.013	0.0353435	0.0199	0.0109	0.0159	0.0461	0.0757	0.02	0.01	0.02	0.04	0.028	0.047	.	.	.	.	.	.	.	.	1.000	N	.	.	.	.	-1.017	T	0.014	T	.	0.106	4.573	-4.7	-0.900	-0.328	8.484	0.106386	NA	NA	0.019302	0.047208	NA	0.007	NA	8.5994646
792	6	24418348	24418348	G	A	exonic	MRS2	NA	synonymous SNV	MRS2:NM_020662:exon8:c.G873A:p.E291E	exonic	ENSG00000124532	NA	synonymous SNV	ENSG00000124532:ENST00000535061:exon6:c.G723A:p.E241E,ENSG00000124532:ENST00000378353:exon8:c.G873A:p.E291E,ENSG00000124532:ENST00000378386:exon8:c.G873A:p.E291E,ENSG00000124532:ENST00000443868:exon9:c.G882A:p.E294E	Score=563;Name=lod=258	NA	6p22.3	NA	NA	NA	NA	rs2793422	0.23	0.23	0.229	0.228235	0.3618	0.2272	0.2464	0.0923	0.2628	0.35	0.19	0.27	0.07	0.3185	0.39	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.991	T	0.108	T	.	1.238	10.03	4.3	0.910	4.113	10.671	1.23767	1.23767	NA	0.387674	0.134362	NA	0.275	NA	8.5986926
792	11	4790948	4790948	C	A	exonic	OR51F1	NA	nonsynonymous SNV	OR51F1:NM_001004752:exon1:c.G200T:p.R67M	exonic	ENSG00000188069	NA	nonsynonymous SNV	ENSG00000188069:ENST00000343430:exon1:c.G200T:p.R67M,ENSG00000188069:ENST00000380383:exon1:c.G221T:p.R74M	NA	NA	11p15.4	NA	NA	NA	NA	rs11033800	0.23	0.23	0.232	0.215655	0.2704	NA	0.2017	0.4569	0.0654	0.25	NA	0.23	0.46	0.2113	0.46	1	T	0.0	B	0.0	B	0.002	N	1.000	P	-3.89	N	4.07	T	-0.952	T	0.000	T	0.067	-1.904	0.008	3.66	0.324	2.960	6.514	-1.904301	NA	1	0.25349	0.446842	NA	0.29	NA	8.5981434
792	7	100377082	100377082	T	C	exonic	ZAN	NA	unknown	UNKNOWN	exonic	ENSG00000146839	NA	nonsynonymous SNV	ENSG00000146839:ENST00000538115:exon35:c.T6329C:p.L2110P,ENSG00000146839:ENST00000542585:exon35:c.T6329C:p.L2110P,ENSG00000146839:ENST00000546213:exon35:c.T1862C:p.L621P,ENSG00000146839:ENST00000546292:exon35:c.T6329C:p.L2110P	NA	NA	7q22.1	NA	NA	NA	NA	rs531503	0.37	0.37	0.35	0.345847	0.334	0.3234	0.2738	0.4281	0.3211	0.35	0.37	0.34	0.44	0.3744	0.44	0.37	T	0.0	B	0.0	B	0.615	N	1.000	P	.	.	2.46	T	-0.915	T	0.000	T	0.208	-0.537	1.559	-2.41	-2.744	-3.786	3.304	-0.53712	NA	NA	0.36082	0.390214	NA	0.297	NA	8.5974467
792	2	73679990	73679990	T	A	exonic	ALMS1	NA	nonsynonymous SNV	ALMS1:NM_015120:exon8:c.T6333A:p.S2111R	exonic	ENSG00000116127	NA	nonsynonymous SNV	ENSG00000116127:ENST00000423048:exon1:c.T1167A:p.S389R,ENSG00000116127:ENST00000409009:exon7:c.T6207A:p.S2069R,ENSG00000116127:ENST00000264448:exon8:c.T6333A:p.S2111R,ENSG00000116127:ENST00000377715:exon8:c.T6333A:p.S2111R	NA	NA	2p13.1	NA	NA	NA	NA	rs6724782	0.34	0.34	0.375	0.363818	0.2276	0.0089	0.3919	0.8775	0.1554	0.23	0.01	0.35	0.86	0.2699	0.86	1	T	0.0	B	0.0	B	0.921	N	1.000	P	-1.04	N	3.53	T	-0.962	T	0.000	T	0.094	-2.434	0.003	-5.06	-1.484	-0.204	0.559	-2.43446	NA	1	0.239003	0.739903	NA	0.435	NA	8.5968304
792	3	121414061	121414061	C	T	exonic	GOLGB1	NA	nonsynonymous SNV	GOLGB1:NM_001256488:exon12:c.G5069A:p.G1690D,GOLGB1:NM_001256486:exon13:c.G5309A:p.G1770D,GOLGB1:NM_001256487:exon13:c.G5192A:p.G1731D,GOLGB1:NM_004487:exon13:c.G5294A:p.G1765D	exonic	ENSG00000173230	NA	nonsynonymous SNV	ENSG00000173230:ENST00000340645:exon13:c.G5294A:p.G1765D,ENSG00000173230:ENST00000393667:exon13:c.G5309A:p.G1770D	NA	NA	3q13.33	NA	NA	NA	NA	rs1127412	0.28	0.28	0.263	0.2502	0.2515	0.4841	0.1614	0.1649	0.1861	0.25	0.47	0.2	0.16	0.2393	0.47	0.55	T	0.001	B	0.001	B	0.021	N	1.000	P	0.41	N	2.62	T	-0.934	T	0.000	T	0.093	-0.473	1.818	-9.92	-1.808	-0.790	1.586	-0.473049	NA	0.26	0.245814	0.16069	NA	0.188	NA	8.5967194
792	3	9991101	9991101	C	G	exonic	PRRT3	NA	nonsynonymous SNV	PRRT3:NM_207351:exon2:c.G699C:p.L233F	exonic	ENSG00000163704	NA	nonsynonymous SNV	ENSG00000163704:ENST00000295984:exon2:c.G699C:p.L233F,ENSG00000163704:ENST00000411976:exon2:c.G699C:p.L233F,ENSG00000163704:ENST00000412055:exon2:c.G699C:p.L233F	Score=329;Name=lod=29	NA	3p25.3	NA	NA	NA	NA	rs55847233	0.37	0.37	0.388	0.382388	0.2147	0.1558	0.3271	0.8154	0.2423	0.22	0.21	0.34	0.81	0.2778	0.81	.	.	0.0	B	0.001	B	0.118	N	1.000	P	-0.425	N	2.56	T	-1.061	T	0.000	T	0.035	-2.526	0.003	1.9	0.191	0.979	6.945	-2.526495	NA	1	0.244572	0.686324	NA	0.565	NA	8.5962614
792	19	47700611	47700611	C	T	exonic	SAE1	NA	synonymous SNV	SAE1:NM_005500:exon7:c.C855T:p.D285D	exonic	ENSG00000142230	NA	synonymous SNV	ENSG00000142230:ENST00000598840:exon5:c.C612T:p.D204D,ENSG00000142230:ENST00000540850:exon6:c.C333T:p.D111D,ENSG00000142230:ENST00000270225:exon7:c.C855T:p.D285D	Score=493;Name=lod=134	NA	19q13.32	Score=881;Name=V$RORA2_01	NA	Name=4	NA	rs11083864	0.01	0.01	0.012	0.00978435	0.0288	NA	0.0101	0.0008	0.0123	0.03	NA	0.01	0.002	0.0185	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.233189	1.233189	NA	0.023953	0.002724	NA	NA	NA	8.5954136
792	1	42050366	42050366	C	T	exonic	HIVEP3	NA	nonsynonymous SNV	HIVEP3:NM_001127714:exon3:c.G103A:p.V35I,HIVEP3:NM_024503:exon4:c.G103A:p.V35I	exonic	ENSG00000127124	NA	nonsynonymous SNV	ENSG00000127124:ENST00000247584:exon3:c.G103A:p.V35I,ENSG00000127124:ENST00000372584:exon3:c.G103A:p.V35I,ENSG00000127124:ENST00000429157:exon3:c.G103A:p.V35I,ENSG00000127124:ENST00000372583:exon4:c.G103A:p.V35I	NA	NA	1p34.2	NA	NA	NA	NA	rs2146315	0.29	0.29	0.271	0.309305	0.2326	0.4345	0.1945	0.3215	0.3241	0.23	0.41	0.22	0.3	0.2722	0.41	0.42	T	0.0	B	0.001	B	0.318	N	1.000	P	0	N	3.42	T	-0.909	T	0.000	T	0.082	-0.914	0.41	-2.92	-0.735	-0.973	10.926	-0.913671	NA	0.23	0.233256	0.297322	ID=COSM1342685;OCCURENCE=1(large_intestine)	0.246	NA	8.5952774
793	5	132535046	132535046	G	A	exonic	FSTL4	NA	nonsynonymous SNV	FSTL4:NM_015082:exon16:c.C2270T:p.T757M	exonic	ENSG00000053108	NA	nonsynonymous SNV	ENSG00000053108:ENST00000265342:exon16:c.C2270T:p.T757M	NA	NA	5q31.1	NA	NA	NA	NA	rs3749817	0.26	0.26	0.222	0.265375	0.2316	0.3948	0.4049	0.062	0.3425	0.23	0.43	0.35	0.06	0.2913	0.43	0.12	T	0.286	B	0.022	B	0.893	N	1.000	P	0.695	N	1.99	T	-0.930	T	0.000	T	0.025	-0.365	2.282	-6.31	-1.355	0.316	2.647	-0.364594	NA	0.14	0.216628	0.087154	NA	0.275	NA	8.5938054
793	16	81010073	81010073	C	T	exonic	CMC2	NA	nonsynonymous SNV	CMC2:NM_020188:exon4:c.G157A:p.V53I	exonic	ENSG00000103121	NA	nonsynonymous SNV	ENSG00000103121:ENST00000565108:exon3:c.G85A:p.V29I,ENSG00000103121:ENST00000219400:exon4:c.G157A:p.V53I,ENSG00000103121:ENST00000564174:exon4:c.G85A:p.V29I,ENSG00000103121:ENST00000564249:exon4:c.G157A:p.V53I,ENSG00000103121:ENST00000565650:exon5:c.G157A:p.V53I,ENSG00000103121:ENST00000565914:exon5:c.G157A:p.V53I	NA	NA	16q23.2	NA	NA	NA	NA	rs8388	0.4	0.4	0.442	0.398163	0.2296	0.4454	0.366	0.6694	0.1789	0.23	0.44	0.36	0.66	0.2952	0.66	0.3	T	0.0	B	0.001	B	0.225	N	1.000	P	.	.	0.98	T	-0.960	T	0.000	T	0.117	-0.381	2.211	-4.67	-1.468	-0.722	4.489	-0.380614	NA	0.23	0.214767	0.575125	NA	0.377	NA	8.5937664
793	20	13830137	13830137	A	C	exonic	SEL1L2	NA	nonsynonymous SNV	SEL1L2:NM_001271539:exon18:c.T1722G:p.H574Q	exonic	ENSG00000101251	NA	nonsynonymous SNV	ENSG00000101251:ENST00000378072:exon18:c.T1722G:p.H574Q,ENSG00000101251:ENST00000284951:exon20:c.T2061G:p.H687Q	NA	NA	20p12.1	NA	NA	NA	NA	rs2073290	0.16	0.16	0.133	0.142372	0.2594	0.0903	0.2363	0.0121	0.1851	0.27	0.09	0.23	0.02	0.2247	0.27	1	T	0.0	B	0.0	B	0.543	N	1.000	P	-0.285	N	2.21	T	-1.042	T	0.000	T	0.046	0.662	7.546	-10.9	-1.893	-1.060	4.104	0.661779	NA	0	0.255588	0.04848	NA	0.188	NA	8.5936454
793	10	12131081	12131081	T	G	exonic	DHTKD1	NA	nonsynonymous SNV	DHTKD1:NM_018706:exon5:c.T814G:p.Y272D	exonic	ENSG00000181192	NA	nonsynonymous SNV	ENSG00000181192:ENST00000437298:exon4:c.T619G:p.Y207D,ENSG00000181192:ENST00000263035:exon5:c.T814G:p.Y272D	Score=542;Name=lod=212	NA	10p14	NA	NA	NA	NA	rs3740015	0.47	0.47	0.467	0.484425	0.5915	0.4812	0.4669	0.2073	0.7648	0.59	0.48	0.5	0.24	0.5596	0.59	0.42	T	0.0	B	0.0	B	0.000	N	0.180	P	-1.74	N	2.35	T	-0.909	T	0.000	T	0.442	-0.388	2.179	4.19	0.554	6.649	12.156	-0.388009	NA	1	0.588837	0.267817	NA	0.37	NA	8.5933964
793	10	129913960	129913960	A	T	exonic	MKI67	NA	nonsynonymous SNV	MKI67:NM_002417:exon7:c.T712A:p.W238R	exonic	ENSG00000148773	NA	nonsynonymous SNV	ENSG00000148773:ENST00000368654:exon7:c.T712A:p.W238R	Score=336;Name=lod=31	NA	10q26.2	NA	Name=CEBPB	NA	NA	rs7095325	0.24	0.24	0.231	0.253395	0.2455	0.247	0.2522	0.3026	0.2025	0.25	0.25	0.21	0.26	0.246	0.31	.	.	0.0	B	0.0	B	0.383	N	0.229	P	-0.805	N	2.1	T	-0.931	T	0.000	T	0.008	-1.096	0.147	-0.736	-0.415	0.172	1.319	-1.095509	NA	1	0.248837	0.314344	NA	0.232	NA	8.5929964
793	5	16481185	16481185	A	G	exonic	FAM134B	NA	synonymous SNV	FAM134B:NM_019000:exon3:c.T180C:p.C60C,FAM134B:NM_001034850:exon5:c.T603C:p.C201C	exonic	ENSG00000154153	NA	synonymous SNV	ENSG00000154153:ENST00000399793:exon3:c.T180C:p.C60C,ENSG00000154153:ENST00000306320:exon5:c.T603C:p.C201C	Score=568;Name=lod=271	NA	5p15.1	Score=831;Name=V$AHRARNT_01	NA	Name=15	NA	rs16868675	0.06	0.06	0.074	0.0828674	0.0209	0.001	0.0331	0.2769	0.0041	0.02	0.0017	0.03	0.21	0.032	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.312794	1.312794	NA	0.021269	0.216693	NA	0.051	NA	8.5924976
793	12	29596365	29596365	T	C	exonic	OVCH1	NA	nonsynonymous SNV	OVCH1:NM_183378:exon25:c.A3086G:p.K1029R	exonic	ENSG00000187950	NA	nonsynonymous SNV	ENSG00000187950:ENST00000537054:exon2:c.A161G:p.K54R,ENSG00000187950:ENST00000318184:exon25:c.A3086G:p.K1029R	NA	NA	12p11.22	NA	NA	NA	NA	rs78265994	0.04	0.04	0.03	0.0413339	0.0915	0.001	0.0591	0.0151	0.0542	0.09	NA	0.04	0.02	0.0689	0.09	0.22	T	0.675	P	0.039	B	.	.	1.000	P	0	N	2.12	T	-1.053	T	0.001	T	0.196	-0.336	2.41	1.22	0.348	1.476	5.372	-0.335546	NA	0.15	0.080606	0.024563	NA	0.022	NA	8.5923274
793	13	111111235	111111235	G	A	exonic	COL4A2	NA	nonsynonymous SNV	COL4A2:NM_001846:exon22:c.G1550A:p.R517K	exonic	ENSG00000134871	NA	nonsynonymous SNV	ENSG00000134871:ENST00000360467:exon22:c.G1550A:p.R517K	NA	NA	13q34	NA	NA	NA	NA	rs7990383	0.52	0.52	0.531	0.509185	0.5964	0.2232	0.5	0.7171	0.4397	0.59	0.2	0.56	0.72	0.539	0.72	1	T	0.0	B	0.001	B	0.444	N	1.000	P	0.08	N	-3.84	D	-0.940	T	0.000	T	0.008	0.185	4.997	-10.1	-1.566	-1.295	3.035	0.185066	NA	1	0.606762	0.694185	NA	0.565	NA	8.5911714
793	1	7913004	7913004	A	G	exonic	UTS2	NA	synonymous SNV	UTS2:NM_006786:exon1:c.T60C:p.S20S	exonic	ENSG00000049247	NA	synonymous SNV	ENSG00000049247:ENST00000361696:exon1:c.T60C:p.S20S,ENSG00000049247:ENST00000377516:exon2:c.T60C:p.S20S	Score=289;Name=lod=20	NA	1p36.23	NA	Name=GATA2_(CG2-96)	Name=11	NA	rs45512694	0.02	0.02	0.018	0.0231629	0.0258	0.006	0.0259	NA	0.0675	0.02	0.01	0.04	NA	0.023	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.353247	NA	NA	0.02686	0.003631	NA	0.007	NA	8.5910066
793	11	71548465	71548465	A	G	exonic	DEFB108B	NA	nonsynonymous SNV	DEFB108B:NM_001002035:exon2:c.A79G:p.I27V	exonic	ENSG00000184276	NA	nonsynonymous SNV	ENSG00000184276:ENST00000328698:exon2:c.A79G:p.I27V	NA	NA	11q13.4	NA	NA	NA	NA	rs12285436	0.46	0.46	0.45	0.446885	0.5984	0.3631	0.3732	0.329	0.589	0.61	0.37	0.42	0.37	0.5364	0.61	0.18	T	0.017	B	0.007	B	0.736	N	1.000	P	.	.	2.71	T	-0.966	T	0.000	T	0.062	1.515	11.02	-2.97	-0.962	-1.707	3.030	1.515361	1.515361	0	0.607617	0.374773	NA	0.043	NA	8.5909164
793	17	6515387	6515387	A	G	exonic	KIAA0753	NA	nonsynonymous SNV	KIAA0753:NM_014804:exon8:c.T1397C:p.L466P	exonic	ENSG00000198920	NA	nonsynonymous SNV	ENSG00000198920:ENST00000542606:exon6:c.T500C:p.L167P,ENSG00000198920:ENST00000572370:exon7:c.T500C:p.L167P,ENSG00000198920:ENST00000361413:exon8:c.T1397C:p.L466P	NA	NA	17p13.1	NA	NA	Name=6	NA	rs2289642	0.66	0.66	0.674	0.689097	0.5467	0.7103	0.6801	0.8253	0.636	0.53	0.68	0.67	0.82	0.6224	0.82	0.43	T	0.0	B	0.0	B	0.285	N	1.000	P	-1.445	N	2.87	T	-1.017	T	0.000	T	0.128	-0.79	0.702	-3.82	-1.047	-0.776	5.043	-0.790487	NA	0	0.573683	0.783791	NA	0.812	NA	8.5905504
793	19	53993923	53993923	C	T	exonic	ZNF813	NA	nonsynonymous SNV	ZNF813:NM_001004301:exon4:c.C437T:p.S146L	exonic	ENSG00000198346	NA	nonsynonymous SNV	ENSG00000198346:ENST00000468450:exon3:c.C278T:p.S93L,ENSG00000198346:ENST00000396403:exon4:c.C437T:p.S146L	NA	NA	19q13.42	NA	NA	NA	NA	rs35712939	0.19	0.19	0.166	0.20008	0.2565	0.0615	0.2003	0.2133	0.2669	0.26	0.05	0.22	0.23	0.2313	0.26	0.07	T	0.356	B	0.049	B	.	.	0.429	P	1.915	M	3.76	T	-0.944	T	0.000	T	0.108	0.704	7.752	0.961	0.820	-1.331	5.222	0.703554	NA	0.23	0.256109	0.211984	NA	0.225	NA	8.5894244
793	17	6493198	6493198	T	C	exonic	KIAA0753	NA	nonsynonymous SNV	KIAA0753:NM_014804:exon18:c.A2687G:p.Q896R	exonic	ENSG00000198920	NA	nonsynonymous SNV	ENSG00000198920:ENST00000576281:exon3:c.A275G:p.Q92R,ENSG00000198920:ENST00000589033:exon11:c.A1055G:p.Q352R,ENSG00000198920:ENST00000542606:exon16:c.A1790G:p.Q597R,ENSG00000198920:ENST00000572370:exon17:c.A1790G:p.Q597R,ENSG00000198920:ENST00000361413:exon18:c.A2687G:p.Q896R	Score=313;Name=lod=25	NA	17p13.2	NA	NA	NA	NA	rs1443417	0.66	0.66	0.675	0.688898	0.5477	0.7093	0.6787	0.8253	0.636	0.53	0.68	0.67	0.82	0.6225	0.82	0.42	T	0.0	B	0.0	B	0.038	N	1.000	P	-1.52	N	1.02	T	-1.018	T	0.000	T	0.052	-0.857	0.533	2.43	0.088	1.060	5.420	-0.857067	NA	0.38	0.573975	0.778947	NA	0.812	NA	8.5891584
793	9	115950706	115950706	A	C	exonic	FKBP15	NA	nonsynonymous SNV	FKBP15:NM_015258:exon13:c.T1239G:p.H413Q	exonic	ENSG00000119321	NA	nonsynonymous SNV	ENSG00000119321:ENST00000238256:exon13:c.T1239G:p.H413Q,ENSG00000119321:ENST00000414250:exon13:c.T1314G:p.H438Q,ENSG00000119321:ENST00000446284:exon13:c.T1314G:p.H438Q	Score=449;Name=lod=89	NA	9q32	NA	NA	Name=48	NA	rs10435864	0.53	0.53	0.523	0.526957	0.6024	0.4345	0.5072	0.4887	0.6104	0.61	0.49	0.5	0.48	0.5643	0.61	1	T	0.0	B	0.0	B	.	.	1.000	P	-2.045	N	2.14	T	-0.920	T	0.000	T	0.052	-0.824	0.614	3.86	0.378	0.137	8.420	-0.823904	NA	1	0.577765	0.506512	NA	0.5	NA	8.5888684
793	21	35281393	35281393	A	G	exonic	ATP5O	NA	synonymous SNV	ATP5O:NM_001697:exon4:c.T321C:p.N107N	exonic	ENSG00000241837,ENSG00000249209	NA	synonymous SNV	ENSG00000241837:ENST00000290299:exon4:c.T321C:p.N107N	Score=458;Name=lod=97	NA	21q22.11	NA	Name=CTCF_(SC-5916)	NA	NA	rs4591	0.68	0.68	0.7	0.702077	0.6958	0.7391	0.5591	0.7352	0.727	0.67	0.7	0.6	0.74	0.6899	0.74	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.985	T	0.000	T	.	-0.34	2.391	2.59	0.021	2.282	9.599	-0.339922	NA	NA	0.694651	0.712211	NA	0.63	NA	8.5863156
793	20	3672647	3672647	C	T	exonic	SIGLEC1	NA	synonymous SNV	SIGLEC1:NM_023068:exon16:c.G4233A:p.L1411L	exonic	ENSG00000088827	NA	synonymous SNV	ENSG00000088827:ENST00000202578:exon16:c.G4233A:p.L1411L,ENSG00000088827:ENST00000344754:exon16:c.G4233A:p.L1411L	Score=336;Name=lod=31	NA	20p13	NA	NA	NA	NA	rs35964604	0.03	0.03	0.039	0.0299521	0.0268	NA	0.013	0.0643	0.0297	0.03	NA	0.01	0.08	0.0268	0.08	.	.	.	.	.	.	.	.	1.000	D	.	.	.	.	-1.135	T	0.015	T	.	-0.91	0.418	1.4	0.031	-0.408	7.370	-0.90974	NA	NA	0.02686	0.054925	NA	0.036	NA	8.5862066
794	15	85383145	85383145	C	G	exonic	ALPK3	NA	nonsynonymous SNV	ALPK3:NM_020778:exon5:c.C1241G:p.T414S	exonic	ENSG00000136383	NA	nonsynonymous SNV	ENSG00000136383:ENST00000258888:exon5:c.C1241G:p.T414S	NA	NA	15q25.3	NA	NA	NA	NA	rs3803403	0.16	0.16	0.138	0.136382	0.2575	0.1329	0.1628	0.0159	0.1595	0.26	0.14	0.2	0.01	0.2202	0.27	0.4	T	0.146	B	0.057	B	0.766	N	1.000	P	0.69	N	0.26	T	-1.026	T	0.000	T	0.122	-0.262	2.744	2.95	0.981	0.517	4.282	-0.261585	NA	0.03	0.271458	0.05606	NA	0.239	NA	8.5841754
794	1	47611598	47611598	T	C	exonic	CYP4A22	NA	nonsynonymous SNV	CYP4A22:NM_001010969:exon10:c.T1283C:p.L428P	exonic	ENSG00000162365	NA	nonsynonymous SNV	ENSG00000162365:ENST00000371890:exon8:c.T989C:p.L330P,ENSG00000162365:ENST00000294337:exon10:c.T1283C:p.L428P,ENSG00000162365:ENST00000371891:exon10:c.T1283C:p.L428P	Score=389;Name=lod=51	NA	1p33	NA	NA	NA	NA	rs2405599	0.31	0.31	0.298	0.375799	0.2237	0.6141	0.2896	0.2239	0.5532	0.21	0.59	0.25	0.2	0.3026	0.59	1	T	0.001	B	0.004	B	0.000	N	0.002	P	-3.695	N	1.64	T	-0.934	T	0.000	T	0.173	-1.395	0.023	0.642	-0.120	3.694	5.799	-1.39492	NA	1	0.224535	0.253518	NA	0.268	NA	8.5824984
794	10	90673070	90673070	G	A	exonic	STAMBPL1	NA	synonymous SNV	STAMBPL1:NM_020799:exon6:c.G633A:p.L211L	exonic	ENSG00000138134	NA	synonymous SNV	ENSG00000138134:ENST00000371922:exon1:c.G135A:p.L45L,ENSG00000138134:ENST00000371924:exon5:c.G633A:p.L211L,ENSG00000138134:ENST00000371926:exon6:c.G633A:p.L211L,ENSG00000138134:ENST00000371927:exon6:c.G633A:p.L211L	Score=369;Name=lod=42	NA	10q23.31	NA	Name=p300	Name=53	NA	rs35493467	0.01	0.01	0.017	0.00798722	0.0328	NA	0.0072	0.0008	0.001	0.04	NA	0.01	NA	0.0224	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.105454	NA	NA	0.029302	0.006809	NA	0.051	NA	8.5821646
794	14	51224417	51224417	G	C	exonic	NIN	NA	nonsynonymous SNV	NIN:NM_020921:exon18:c.C3331G:p.P1111A,NIN:NM_182944:exon18:c.C3331G:p.P1111A,NIN:NM_182946:exon18:c.C3331G:p.P1111A	exonic	ENSG00000100503	NA	nonsynonymous SNV	ENSG00000100503:ENST00000530997:exon16:c.C3331G:p.P1111A,ENSG00000100503:ENST00000245441:exon18:c.C3331G:p.P1111A,ENSG00000100503:ENST00000324330:exon18:c.C3331G:p.P1111A,ENSG00000100503:ENST00000382041:exon18:c.C3331G:p.P1111A,ENSG00000100503:ENST00000453196:exon18:c.C3331G:p.P1111A,ENSG00000100503:ENST00000476352:exon18:c.C3331G:p.P1111A	NA	NA	14q22.1	NA	NA	NA	NA	rs2236316	0.18	0.18	0.172	0.186302	0.2734	0.1617	0.2565	0.0628	0.2393	0.25	0.15	0.23	0.09	0.2272	0.25	0.85	T	0.002	B	0.004	B	0.355	N	1.000	P	1.355	L	3.57	T	-0.915	T	0.000	T	0.237	-2.004	0.007	-4.1	-0.361	-0.337	8.488	-2.003729	NA	1	0.250814	0.103495	NA	0.109	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117803.2;CLNDSDB=.;CLNDSDBID=.	8.5819194
794	6	30080231	30080231	G	A	exonic	TRIM31	NA	nonsynonymous SNV	TRIM31:NM_007028:exon2:c.C352T:p.R118C	exonic	ENSG00000204616	NA	nonsynonymous SNV	ENSG00000204616:ENST00000376734:exon2:c.C352T:p.R118C,ENSG00000204616:ENST00000540829:exon2:c.C352T:p.R118C	NA	NA	6p22.1	NA	NA	NA	NA	rs3734838	0.08	0.08	0.077	0.0694888	0.0775	0.1141	0.0605	0.0333	0.0706	0.08	0.13	0.06	0.02	0.0886	0.13	0.13	T	0.773	P	0.302	B	0.246	N	1.000	P	0.695	N	0.93	T	-1.086	T	0.029	T	0.103	0.754	7.995	1.08	0.073	-3.431	7.870	0.754104	NA	0.16	0.08804	0.046658	NA	0.043	NA	8.5791934
794	2	228883029	228883029	A	C	exonic	SPHKAP	NA	nonsynonymous SNV	SPHKAP:NM_001142644:exon7:c.T2541G:p.H847Q,SPHKAP:NM_030623:exon7:c.T2541G:p.H847Q	exonic	ENSG00000153820	NA	nonsynonymous SNV	ENSG00000153820:ENST00000344657:exon7:c.T2541G:p.H847Q,ENSG00000153820:ENST00000392056:exon7:c.T2541G:p.H847Q	NA	NA	2q36.3	NA	NA	NA	NA	rs3811515	0.21	0.21	0.214	0.222644	0.2406	0.2242	0.2464	0.0318	0.4438	0.25	0.27	0.27	0.05	0.2643	0.27	0.04	D	0.019	B	0.012	B	0.367	N	1.000	P	2.015	M	2.8	T	-0.960	T	0.000	T	0.032	0.227	5.226	0.984	0.148	0.219	6.064	0.227206	NA	0.11	0.251977	0.064004	ID=COSM149085;OCCURENCE=1(stomach)	0.217	NA	8.5764564
794	6	56327849	56327849	C	T	exonic	DST	NA	nonsynonymous SNV	DST:NM_015548:exon82:c.G15124A:p.A5042T,DST:NM_183380:exon92:c.G16102A:p.A5368T,DST:NM_001144770:exon93:c.G16222A:p.A5408T,DST:NM_001144769:exon95:c.G16636A:p.A5546T	exonic	ENSG00000151914	NA	nonsynonymous SNV	ENSG00000151914:ENST00000244364:exon82:c.G15124A:p.A5042T	Score=703;Name=lod=960	NA	6p12.1	Score=785;Name=V$ARNT_02	NA	NA	NA	rs11758339	0.2	0.2	0.195	0.21865	0.2515	0.2401	0.2507	0.0802	0.3272	0.24	0.23	0.28	0.07	0.2455	0.28	1	T	0.0	B	0.002	B	.	.	1.000	P	0.14	N	1.07	T	-0.971	T	0.015	T	0.001	1.295	10.24	1.9	0.335	0.212	7.175	1.295014	1.295014	0.75	0.260582	0.101341	NA	0.203	NA	8.5757514
795	2	160743040	160743040	T	A	exonic	LY75,LY75-CD302	NA	nonsynonymous SNV	LY75-CD302:NM_001198759:exon5:c.A804T:p.E268D,LY75-CD302:NM_001198760:exon5:c.A804T:p.E268D,LY75:NM_002349:exon5:c.A804T:p.E268D	exonic	ENSG00000054219,ENSG00000248672	NA	nonsynonymous SNV	ENSG00000054219:ENST00000263636:exon5:c.A804T:p.E268D,ENSG00000248672:ENST00000504764:exon5:c.A804T:p.E268D,ENSG00000248672:ENST00000505052:exon5:c.A804T:p.E268D,ENSG00000054219:ENST00000553424:exon5:c.A804T:p.E268D,ENSG00000054219:ENST00000554112:exon5:c.A804T:p.E268D	Score=403;Name=lod=58	NA	2q24.2	NA	NA	NA	NA	rs2271381	0.2	0.2	0.179	0.235423	0.2555	0.1964	0.1916	0.0688	0.5112	0.26	0.2	0.23	0.07	0.2595	0.26	0.52	T	0.008	B	0.015	B	0.269	N	0.997	P	0.315	N	0.58	T	-1.018	T	0.000	T	0.08	1.444	10.77	1.79	0.986	0.544	1.447	1.443503	1.443503	0.53	0.243488	0.104857	NA	0.217	NA	8.5748454
795	8	9413875	9413875	T	C	exonic	TNKS	NA	synonymous SNV	TNKS:NM_003747:exon1:c.T426C:p.S142S	exonic	ENSG00000173273	NA	synonymous SNV	ENSG00000173273:ENST00000310430:exon1:c.T426C:p.S142S,ENSG00000173273:ENST00000520408:exon1:c.T426C:p.S142S,ENSG00000173273:ENST00000522110:exon1:c.T426C:p.S142S	Score=500;Name=lod=143	NA	8p23.1	NA	Name=Pol2,NRSF,ZNF263	Name=100	NA	rs33985989	0.02	0.02	0.009	0.00998403	0.0288	0.001	0.0245	0.0008	0.002	0.03	NA	0.03	NA	0.0247	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.477207	1.477207	NA	0.039651	0.006582	NA	0.007	NA	8.5735156
795	13	52515354	52515354	A	G	exonic	ATP7B	NA	nonsynonymous SNV	ATP7B:NM_001005918:exon12:c.T2798C:p.V933A,ATP7B:NM_000053:exon16:c.T3419C:p.V1140A,ATP7B:NM_001243182:exon17:c.T3086C:p.V1029A	exonic	ENSG00000123191	NA	nonsynonymous SNV	ENSG00000123191:ENST00000400370:exon8:c.T2129C:p.V710A,ENSG00000123191:ENST00000417240:exon9:c.T1052C:p.V351A,ENSG00000123191:ENST00000344297:exon12:c.T2798C:p.V933A,ENSG00000123191:ENST00000418097:exon15:c.T3224C:p.V1075A,ENSG00000123191:ENST00000448424:exon15:c.T3185C:p.V1062A,ENSG00000123191:ENST00000242839:exon16:c.T3419C:p.V1140A,ENSG00000123191:ENST00000400366:exon17:c.T3086C:p.V1029A	NA	NA	13q14.3	Score=785;Name=V$PPARG_03	NA	NA	NA	rs1801249	0.53	0.53	0.512	0.540535	0.6034	0.4008	0.5893	0.5741	0.5399	0.59	0.4	0.6	0.53	0.5653	0.6	0.91	T	0.001	B	0.038	B	0.057	N	1.000	P	0	N	-3.78	D	-0.954	T	0.000	T	0.021	-1.739	0.011	0.087	-0.133	0.110	1.657	-1.739159	NA	0.79	0.591195	0.548287	NA	0.522	CLINSIG=probable-non-pathogenic|non-pathogenic;CLNDBN=Wilson's_disease|not_specified;CLNREVSTAT=single|single;CLNACC=RCV000029369.1|RCV000078051.1;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet:SNOMED_CT|.;CLNDSDBID=NBK1512:C0019202:277900:ORPHA905:88518009|.	8.5734384
795	2	38536626	38536626	T	G	exonic	ATL2	NA	synonymous SNV	ATL2:NM_001135673:exon9:c.A966C:p.R322R,ATL2:NM_022374:exon9:c.A966C:p.R322R	exonic	ENSG00000119787	NA	synonymous SNV	ENSG00000119787:ENST00000449130:exon5:c.A420C:p.R140R,ENSG00000119787:ENST00000402054:exon8:c.A453C:p.R151R,ENSG00000119787:ENST00000406122:exon8:c.A453C:p.R151R,ENSG00000119787:ENST00000539122:exon8:c.A453C:p.R151R,ENSG00000119787:ENST00000546051:exon8:c.A453C:p.R151R,ENSG00000119787:ENST00000332337:exon9:c.A912C:p.R304R,ENSG00000119787:ENST00000378954:exon9:c.A966C:p.R322R,ENSG00000119787:ENST00000419554:exon9:c.A966C:p.R322R,ENSG00000119787:ENST00000452935:exon9:c.A912C:p.R304R	Score=683;Name=lod=799	NA	2p22.2	NA	NA	NA	NA	rs2305243	0.29	0.29	0.27	0.327476	0.3718	0.1925	0.3285	0.2708	0.4969	0.37	0.19	0.33	0.25	0.3623	0.37	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.922	T	0.000	T	.	1.372	10.52	5.03	1.168	-0.313	4.788	1.372303	1.372303	NA	0.359767	0.271902	ID=COSM148845;OCCURENCE=1(stomach)	0.268	NA	8.5727996
795	2	1497803	1497803	C	T	exonic	TPO	NA	synonymous SNV	TPO:NM_175722:exon9:c.C1479T:p.D493D,TPO:NM_001206745:exon10:c.C1827T:p.D609D,TPO:NM_175719:exon10:c.C1827T:p.D609D,TPO:NM_175721:exon10:c.C1998T:p.D666D,TPO:NM_000547:exon11:c.C1998T:p.D666D,TPO:NM_001206744:exon11:c.C1998T:p.D666D	exonic	ENSG00000115705	NA	synonymous SNV	ENSG00000115705:ENST00000469607:exon2:c.C420T:p.D140D,ENSG00000115705:ENST00000422464:exon8:c.C1785T:p.D595D,ENSG00000115705:ENST00000382198:exon9:c.C1479T:p.D493D,ENSG00000115705:ENST00000349624:exon10:c.C1479T:p.D493D,ENSG00000115705:ENST00000382201:exon10:c.C1827T:p.D609D,ENSG00000115705:ENST00000329066:exon11:c.C1998T:p.D666D,ENSG00000115705:ENST00000337415:exon11:c.C1998T:p.D666D,ENSG00000115705:ENST00000345913:exon11:c.C1998T:p.D666D,ENSG00000115705:ENST00000346956:exon11:c.C1998T:p.D666D	NA	NA	2p25.3	NA	NA	NA	NA	rs1126797	0.38	0.38	0.386	0.359026	0.3688	0.4067	0.3689	0.3147	0.3528	0.36	0.43	0.38	0.34	0.363	0.43	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.037	T	0.000	T	.	-1.16	0.096	-9.63	-1.948	-4.038	9.861	-1.159934	NA	NA	0.365116	0.322061	NA	0.362	NA	8.5697506
795	13	43597865	43597865	A	G	exonic	DNAJC15	NA	nonsynonymous SNV	DNAJC15:NM_013238:exon1:c.A103G:p.R35G	exonic	ENSG00000120675	NA	nonsynonymous SNV	ENSG00000120675:ENST00000379221:exon1:c.A103G:p.R35G	NA	NA	13q14.11	NA	Name=TCF4,NRSF,Pol2,YY1_(C-20),TAF1,POU2F2,CTCF,Oct-2,Egr-1,NANOG_(SC-33759),Pol2-4H8,HA-E2F1,Pol2(b),TBP,HEY1,NFKB,CTCF_(C-20),PAX5-C20	Name=140	NA	rs12015	0.24	0.24	0.227	0.235823	0.2535	0.1002	0.2219	0.4281	0.1074	0.26	0.11	0.22	0.37	0.2704	0.41	0.45	T	0.0	B	0.0	B	0.608	N	1.000	P	-0.975	N	0.91	T	-0.918	T	0.000	T	0.027	0.346	5.877	0.561	-0.381	-0.682	4.356	0.345947	NA	0.6	0.239767	0.407584	ID=COSM1477232,COSM432407;OCCURENCE=1(breast)	0.246	NA	8.5696664
795	6	52617731	52617731	C	G	exonic	GSTA2	NA	nonsynonymous SNV	GSTA2:NM_000846:exon5:c.G335C:p.S112T	exonic	ENSG00000244067	NA	nonsynonymous SNV	ENSG00000244067:ENST00000493422:exon5:c.G335C:p.S112T	NA	NA	6p12.2	NA	NA	NA	NA	rs2180314	0.55	0.55	0.513	0.536342	0.5835	0.6845	0.6772	0.2882	0.5706	0.57	0.7	0.67	0.27	0.5917	0.7	0.59	T	0.0	B	0.001	B	0.037	N	1.000	P	-0.64	N	4.52	T	-0.906	T	0.001	T	0.036	-1.098	0.145	-4.51	-1.211	-3.139	1.606	-1.097912	NA	NA	0.588605	0.327962	NA	0.558	NA	8.5695284
795	8	124696867	124696867	C	T	exonic	ANXA13	NA	nonsynonymous SNV	ANXA13:NM_004306:exon10:c.G814A:p.V272I,ANXA13:NM_001003954:exon11:c.G937A:p.V313I	exonic	ENSG00000104537	NA	nonsynonymous SNV	ENSG00000104537:ENST00000419625:exon10:c.G814A:p.V272I,ENSG00000104537:ENST00000262219:exon11:c.G937A:p.V313I	Score=300;Name=lod=22	Name=Event-related brain oscillations	8q24.13	Score=849;Name=V$CART1_01	NA	NA	NA	rs2294015	0.64	0.64	0.636	0.696086	0.5577	0.498	0.6571	0.938	0.7434	0.56	0.51	0.62	0.93	0.6241	0.93	0.84	T	0.0	B	0.001	B	0.020	N	1.000	P	-0.325	N	4.04	T	-1.029	T	0.000	T	0.058	-0.704	0.96	0.118	-0.161	0.948	1.559	-0.703706	NA	1	0.584767	0.87222	NA	0.717	NA	8.5667664
795	15	84706461	84706461	C	T	exonic	ADAMTSL3	NA	nonsynonymous SNV	ADAMTSL3:NM_207517:exon30:c.C4979T:p.T1660I	exonic	ENSG00000156218	NA	nonsynonymous SNV	ENSG00000156218:ENST00000286744:exon30:c.C4979T:p.T1660I	Score=517;Name=lod=169	NA	15q25.2	NA	NA	NA	NA	rs950169	0.15	0.15	0.135	0.128994	0.2734	0.0536	0.1787	0.0113	0.182	0.28	0.05	0.2	0.02	0.2231	0.28	0.12	T	0.0	B	0.001	B	0.383	N	0.000	P	0.895	L	0.93	T	-1.008	T	0.000	T	0.063	1.861	12.18	-0.022	0.071	2.507	3.863	1.861131	1.861131	0.07	0.270179	0.047662	NA	0.13	NA	8.5666544
795	11	5718517	5718517	G	A	exonic	TRIM22	NA	nonsynonymous SNV	TRIM22:NM_001199573:exon3:c.G463A:p.D155N,TRIM22:NM_006074:exon3:c.G463A:p.D155N	exonic	ENSG00000132274	NA	nonsynonymous SNV	ENSG00000132274:ENST00000379965:exon3:c.G463A:p.D155N,ENSG00000132274:ENST00000414641:exon3:c.G463A:p.D155N,ENSG00000132274:ENST00000425490:exon4:c.G463A:p.D155N	NA	NA	11p15.4	NA	NA	NA	NA	rs7935564	0.46	0.46	0.451	0.457069	0.6372	0.1766	0.4928	0.4728	0.5143	0.63	0.18	0.49	0.47	0.5329	0.63	0.01	D	0.143	B	0.085	B	.	.	1.000	P	0.69	N	-0.08	T	-0.933	T	0.000	T	0.063	2.227	13.4	-4.48	-0.659	-2.582	2.263	2.227061	2.227061	0.01	0.596611	0.49763	NA	0.529	NA	8.5666224
796	8	18729817	18729817	G	A	exonic	PSD3	NA	nonsynonymous SNV	PSD3:NM_015310:exon3:c.C557T:p.T186M	exonic	ENSG00000156011	NA	nonsynonymous SNV	ENSG00000156011:ENST00000523619:exon2:c.C362T:p.T121M,ENSG00000156011:ENST00000327040:exon3:c.C557T:p.T186M,ENSG00000156011:ENST00000440756:exon3:c.C557T:p.T186M	NA	NA	8p22	NA	Name=CTCF	NA	NA	rs7016219	0.67	0.67	0.275	0.852835	0.671	0.9772	0.8012	0.9289	0.8456	0.53	0.83	0.65	0.72	0.756	0.83	0.21	T	0.071	B	0.022	B	0.000	N	1.000	P	0.345	N	1.45	T	-0.977	T	0.000	T	0.043	-0.194	3.06	-4.68	-1.324	-0.637	9.031	-0.193517	NA	0.22	0.341353	0.574124	NA	NA	NA	8.5649804
796	5	70849021	70849021	G	T	exonic	BDP1	NA	synonymous SNV	BDP1:NM_018429:exon35:c.G7074T:p.P2358P	exonic	ENSG00000145734	NA	nonsynonymous SNV	ENSG00000145734:ENST00000380675:exon34:c.G1295T:p.R432L	Score=352;Name=lod=36	NA	5q13.2	NA	NA	NA	NA	rs469039	0.42	0.42	0.421	0.432708	0.4911	0.379	0.3444	0.385	0.5552	0.5	0.39	0.35	0.38	0.462	0.5	0	D	.	.	.	.	.	.	0.244	P	.	.	0.75	T	-0.923	T	0.000	T	.	-1.67	0.012	2.34	0.325	0.510	1.693	-1.669849	NA	0	0.484117	0.3732	NA	0.406	NA	8.562783
796	10	26463130	26463130	C	A	exonic	MYO3A	NA	nonsynonymous SNV	MYO3A:NM_017433:exon30:c.C3937A:p.R1313S	exonic	ENSG00000095777	NA	nonsynonymous SNV	ENSG00000095777:ENST00000265944:exon30:c.C3937A:p.R1313S	NA	NA	10p12.1	NA	NA	NA	NA	rs1999240	0.62	0.62	0.622	0.601038	0.6004	0.6329	0.634	0.5545	0.6084	0.61	0.67	0.6	0.58	0.5987	0.67	0.75	T	0.0	B	0.0	B	0.001	N	0.000	P	0	N	-1.16	T	-0.920	T	0.000	T	0.009	-1.94	0.007	4.07	0.300	3.235	8.659	-1.940455	NA	1	0.571628	0.545393	NA	0.601	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000039038.1;CLNDSDB=.;CLNDSDBID=.	8.5626054
796	3	57494165	57494165	C	G	exonic	DNAH12	NA	synonymous SNV	DNAH12:NM_178504:exon7:c.G645C:p.L215L,DNAH12:NM_198564:exon7:c.G645C:p.L215L	exonic	ENSG00000174844	NA	synonymous SNV	ENSG00000174844:ENST00000311202:exon7:c.G645C:p.L215L,ENSG00000174844:ENST00000351747:exon7:c.G645C:p.L215L,ENSG00000174844:ENST00000389536:exon7:c.G645C:p.L215L,ENSG00000174844:ENST00000495027:exon7:c.G645C:p.L215L	Score=399;Name=lod=56	NA	3p14.3	Score=851;Name=V$FOXJ2_02	NA	Name=3	NA	rs10510794	0.04	0.04	0.039	0.048722	0.0378	NA	0.0476	0.1188	0.0164	0.03	NA	0.03	0.12	0.0339	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.76344	NA	NA	0.032922	0.110758	NA	0.072	NA	8.5620446
796	20	31688260	31688260	C	T	exonic	BPIFB4	NA	nonsynonymous SNV	BPIFB4:NM_182519:exon12:c.C1598T:p.T533I	exonic	ENSG00000186191	NA	nonsynonymous SNV	ENSG00000186191:ENST00000375483:exon12:c.C1598T:p.T533I	Score=321;Name=lod=27	NA	20q11.21	NA	NA	NA	NA	rs11696307	0.48	0.48	0.484	0.472644	0.6044	0.247	0.5187	0.5189	0.4744	0.6	0.24	0.54	0.52	0.5539	0.61	0.3	T	0.0	B	0.0	B	0.000	N	1.000	P	0	N	3.3	T	-1.034	T	0.000	T	0.105	0.572	7.09	4.67	0.463	1.778	10.320	0.571892	NA	0.35	0.613721	0.549705	NA	0.493	NA	8.5613124
796	1	207782931	207782931	A	G	exonic	CR1	NA	nonsynonymous SNV	CR1:NM_000573:exon29:c.A4843G:p.I1615V,CR1:NM_000651:exon37:c.A6193G:p.I2065V	exonic	ENSG00000203710	NA	nonsynonymous SNV	ENSG00000203710:ENST00000367051:exon29:c.A4843G:p.I1615V,ENSG00000203710:ENST00000367052:exon29:c.A4843G:p.I1615V,ENSG00000203710:ENST00000367053:exon29:c.A4843G:p.I1615V,ENSG00000203710:ENST00000400960:exon29:c.A4843G:p.I1615V,ENSG00000203710:ENST00000367049:exon37:c.A6193G:p.I2065V	NA	NA	1q32.2	NA	NA	NA	NA	rs6691117	0.39	0.39	0.382	0.493411	0.2256	0.3433	0.3761	0.8722	0.4949	0.22	0.25	0.37	0.83	0.3341	0.83	1	T	0.001	B	0.005	B	.	.	1.000	P	-1.78	N	0.17	T	-0.964	T	0.000	T	0.057	-1.51	0.017	2.54	0.637	2.671	5.531	-1.509804	NA	1	0.213248	0.751169	NA	0.413	NA	8.5603854
796	12	60173356	60173356	A	T	exonic	SLC16A7	NA	nonsynonymous SNV	SLC16A7:NM_004731:exon5:c.A1333T:p.T445S,SLC16A7:NM_001270622:exon6:c.A1333T:p.T445S,SLC16A7:NM_001270623:exon6:c.A1333T:p.T445S	exonic	ENSG00000118596	NA	nonsynonymous SNV	ENSG00000118596:ENST00000261187:exon5:c.A1333T:p.T445S,ENSG00000118596:ENST00000547379:exon6:c.A1333T:p.T445S,ENSG00000118596:ENST00000552432:exon6:c.A1333T:p.T445S,ENSG00000118596:ENST00000543448:exon7:c.A1036T:p.T346S,ENSG00000118596:ENST00000552024:exon7:c.A1333T:p.T445S	NA	NA	12q14.1	NA	NA	NA	NA	rs3763980	0.28	0.28	0.278	0.245008	0.3002	0.3175	0.1801	0.2088	0.2086	0.29	0.33	0.24	0.21	0.2338	0.33	.	.	0.0	B	0.002	B	0.256	N	1.000	P	-0.695	N	2.49	T	-0.933	T	0.000	T	0.027	-1.902	0.008	-2.51	-0.635	1.138	2.930	-1.902371	NA	1	0.238953	0.211984	NA	0.268	NA	8.5603804
796	6	17675246	17675246	T	C	exonic	NUP153	NA	nonsynonymous SNV	NUP153:NM_005124:exon5:c.A742G:p.I248V	exonic	ENSG00000124789	NA	nonsynonymous SNV	ENSG00000124789:ENST00000262077:exon5:c.A742G:p.I248V,ENSG00000124789:ENST00000537253:exon5:c.A742G:p.I248V	NA	NA	6p22.3	NA	NA	NA	NA	rs2228375	0.14	0.14	0.108	0.120807	0.2376	0.0456	0.2839	0.0159	0.1043	0.26	0.05	0.21	0.02	0.2441	0.29	1	T	0.0	B	0.003	B	0.192	N	1.000	P	0.57	N	1.55	T	-1.032	T	0.010	T	0.015	-1.326	0.032	-11.5	-2.927	-1.085	11.415	-1.32554	NA	0.75	0.293837	0.05901	NA	0.239	NA	8.5577964
796	19	9059159	9059159	T	G	exonic	MUC16	NA	nonsynonymous SNV	MUC16:NM_024690:exon3:c.A28287C:p.K9429N	exonic	ENSG00000181143	NA	nonsynonymous SNV	ENSG00000181143:ENST00000397910:exon3:c.A28287C:p.K9429N	NA	NA	19p13.2	NA	NA	NA	NA	rs12462651	0.15	0.15	0.133	0.146366	0.0865	0.2669	0.1787	0.087	0.1411	0.09	0.3	0.15	0.08	0.1124	0.3	0	D	0.478	P	0.181	B	.	.	.	.	0.695	N	1.66	T	-0.967	T	0.000	T	0.016	0.227	5.225	-1.81	-0.484	-0.820	4.252	0.227014	NA	0.15	0.076997	0.095982	NA	0.145	NA	8.5574364
796	22	18912678	18912678	A	G	exonic	PRODH	NA	nonsynonymous SNV	PRODH:NM_001195226:exon4:c.T229C:p.W77R,PRODH:NM_016335:exon5:c.T553C:p.W185R	exonic	ENSG00000100033	NA	nonsynonymous SNV	ENSG00000100033:ENST00000334029:exon4:c.T229C:p.W77R,ENSG00000100033:ENST00000357068:exon4:c.T553C:p.W185R,ENSG00000100033:ENST00000420436:exon4:c.T229C:p.W77R,ENSG00000100033:ENST00000450579:exon4:c.T76C:p.W26R	Score=481;Name=lod=120	NA	22q11.21	NA	NA	NA	NA	rs4819756	0.74	0.74	0.783	0.78095	0.5567	0.9712	0.6715	0.916	0.7106	0.53	0.97	0.65	0.87	0.6417	0.97	0.53	T	0.0	B	0.0	B	0.094	N	0.999	P	.	.	-0.92	T	-0.991	T	0.000	T	0.068	-1.216	0.065	2.88	0.250	3.683	6.438	-1.215883	NA	0.67	0.577558	0.862006	NA	0.652	NA	8.5573754
796	4	114213631	114213631	C	T	exonic	ANK2	NA	synonymous SNV	ANK2:NM_001148:exon21:c.C2337T:p.V779V,ANK2:NM_020977:exon21:c.C2337T:p.V779V,ANK2:NM_001127493:exon22:c.C2274T:p.V758V	exonic	ENSG00000145362	NA	synonymous SNV	ENSG00000145362:ENST00000264366:exon21:c.C2337T:p.V779V,ENSG00000145362:ENST00000357077:exon21:c.C2337T:p.V779V,ENSG00000145362:ENST00000394537:exon21:c.C2337T:p.V779V,ENSG00000145362:ENST00000503423:exon21:c.C2175T:p.V725V,ENSG00000145362:ENST00000503271:exon22:c.C2274T:p.V758V,ENSG00000145362:ENST00000504454:exon22:c.C2382T:p.V794V,ENSG00000145362:ENST00000506722:exon22:c.C2274T:p.V758V	Score=612;Name=lod=409	NA	4q26	NA	Name=Pol2-4H8,NANOG_(SC-33759)	Name=58	NA	rs29341	0.03	0.03	0.023	0.0215655	0.0368	NA	0.0245	0.0325	0.0112	0.04	NA	0.04	0.03	0.0363	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.628258	1.628258	NA	0.036628	0.026555	NA	0.007	NA	8.5569386
797	16	71318577	71318577	T	C	exonic	FTSJD1	NA	nonsynonymous SNV	FTSJD1:NM_001099642:exon3:c.A1247G:p.N416S,FTSJD1:NM_018348:exon3:c.A1247G:p.N416S	exonic	ENSG00000180917	NA	nonsynonymous SNV	ENSG00000180917:ENST00000338099:exon3:c.A1247G:p.N416S,ENSG00000180917:ENST00000434935:exon3:c.A1247G:p.N416S	Score=462;Name=lod=101	NA	16q22.2	NA	NA	NA	NA	rs3803704	0.29	0.29	0.263	0.277955	0.2485	0.2103	0.4784	0.2852	0.226	0.26	0.23	0.45	0.3	0.2804	0.45	0.64	T	0.001	B	0.002	B	0.003	N	0.643	P	1.445	L	2.6	T	-0.920	T	0.000	T	0.003	-0.721	0.906	2.53	0.503	0.147	8.913	-0.720809	NA	0.36	0.251284	0.257859	ID=COSM435711;OCCURENCE=1(breast)	0.341	NA	8.5531494
797	19	9062415	9062415	T	G	exonic	MUC16	NA	nonsynonymous SNV	MUC16:NM_024690:exon3:c.A25031C:p.D8344A	exonic	ENSG00000181143	NA	nonsynonymous SNV	ENSG00000181143:ENST00000397910:exon3:c.A25031C:p.D8344A	NA	NA	19p13.2	NA	NA	NA	NA	rs12978757	0.6	0.6	0.597	0.588658	0.5646	0.6042	0.6801	0.5507	0.5838	0.57	0.66	0.64	0.53	0.6042	0.66	0	D	0.0	B	0.0	B	.	.	.	.	-0.895	N	1.99	T	-0.942	T	0.000	T	0.036	0.046	4.255	-5.0	-1.816	-0.632	7.046	0.046398	NA	0.44	0.61161	0.555582	NA	0.638	NA	8.5529234
797	19	20807185	20807185	C	T	exonic	ZNF626	NA	nonsynonymous SNV	ZNF626:NM_001076675:exon4:c.G1498A:p.E500K	exonic	ENSG00000188171	NA	nonsynonymous SNV	ENSG00000188171:ENST00000601440:exon4:c.G1498A:p.E500K	Score=358;Name=lod=38	NA	19p12	NA	NA	NA	NA	rs10408597	0.64	0.64	0.518	0.744409	0.8807	0.8115	0.8473	0.5174	0.7689	0.73	0.71	0.78	0.3	0.189	0.78	1	T	0.0	B	0.0	B	.	.	0.000	P	-1.04	N	.	.	-0.949	T	0.000	T	0.013	-1.721	0.011	0.832	-1.581	-0.960	2.279	-1.720816	NA	1	0.714626	0.346334	ID=COSM439062;OCCURENCE=1(breast)	NA	NA	8.5490074
797	1	200867552	200867552	C	T	exonic	C1orf106	NA	synonymous SNV	C1orf106:NM_001142569:exon2:c.C24T:p.S8S,C1orf106:NM_018265:exon2:c.C321T:p.S107S	exonic	ENSG00000163362	NA	synonymous SNV	ENSG00000163362:ENST00000367342:exon2:c.C279T:p.S93S,ENSG00000163362:ENST00000413687:exon2:c.C24T:p.S8S,ENSG00000163362:ENST00000451872:exon2:c.C24T:p.S8S,ENSG00000163362:ENST00000532631:exon2:c.C24T:p.S8S	Score=475;Name=lod=114	NA	1q32.1	Score=832;Name=V$ATF_01	NA	Name=20	NA	rs2271017	0.06	0.06	0.058	0.0515176	0.0378	0.1478	0.0159	0.0174	0.0378	0.04	0.13	0.02	0.03	0.0429	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.239828	1.239828	NA	0.037791	0.019065	ID=COSM146723;OCCURENCE=1(stomach)	0.014	NA	8.5481756
797	9	104032338	104032338	C	T	exonic	LPPR1	NA	synonymous SNV	LPPR1:NM_017753:exon3:c.C240T:p.T80T,LPPR1:NM_207299:exon3:c.C240T:p.T80T	exonic	ENSG00000148123	NA	synonymous SNV	ENSG00000148123:ENST00000374874:exon3:c.C240T:p.T80T,ENSG00000148123:ENST00000395056:exon3:c.C240T:p.T80T,ENSG00000148123:ENST00000456287:exon3:c.C240T:p.T80T	Score=573;Name=lod=284	NA	9q31.1	Score=869;Name=V$NF1_Q6	NA	Name=2	NA	rs7847596	0.02	0.02	0.013	0.0171725	0.0417	0.001	0.0187	0.003	0.0266	0.05	0.0017	0.02	0.01	0.0371	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.983248	NA	NA	0.039767	0.007263	NA	0.007	NA	8.5480996
797	5	78573790	78573790	A	T	exonic	JMY	NA	nonsynonymous SNV	JMY:NM_152405:exon2:c.A1090T:p.M364L	exonic	ENSG00000152409	NA	nonsynonymous SNV	ENSG00000152409:ENST00000396137:exon2:c.A1090T:p.M364L	Score=697;Name=lod=908	NA	5q14.1	NA	NA	NA	NA	rs13182512	0.52	0.52	0.516	0.480631	0.6243	0.4851	0.5562	0.3646	0.4315	0.63	0.46	0.53	0.42	0.5465	0.63	0.25	T	0.001	B	0.002	B	0.007	N	0.910	P	1.1	L	3.23	T	-0.966	T	0.000	T	0.058	-0.022	3.901	-4.71	-0.624	1.365	5.503	-0.022008	NA	0.33	0.616513	0.401199	NA	0.565	NA	8.5460204
797	1	34663208	34663208	C	G	exonic	C1orf94	NA	nonsynonymous SNV	C1orf94:NM_001134734:exon2:c.C703G:p.Q235E,C1orf94:NM_032884:exon2:c.C133G:p.Q45E	exonic	ENSG00000142698	NA	nonsynonymous SNV	ENSG00000142698:ENST00000373374:exon2:c.C133G:p.Q45E,ENSG00000142698:ENST00000488417:exon2:c.C703G:p.Q235E	NA	NA	1p34.3	NA	NA	NA	NA	rs1382602	0.34	0.34	0.388	0.379992	0.2376	0.1409	0.3617	0.7632	0.2679	0.23	0.13	0.35	0.77	0.2847	0.77	1	T	0.0	B	0.0	B	0.022	N	1.000	P	-1.845	N	2.27	T	-0.986	T	0.000	T	0.038	-2.344	0.004	3.09	0.516	1.778	4.606	-2.343661	NA	1	0.265581	0.666818	NA	0.399	NA	8.5454524
798	10	124214355	124214355	C	T	exonic	ARMS2	NA	stopgain	ARMS2:NM_001099667:exon1:c.C112T:p.R38X	exonic	ENSG00000254636	NA	stopgain	ENSG00000254636:ENST00000528446:exon1:c.C112T:p.R38X	NA	NA	10q26.13	NA	NA	NA	NA	rs2736911	0.13	0.13	0.135	0.114417	0.173	0.1905	0.0908	0.056	0.0716	0.16	0.18	0.09	0.07	0.1309	0.18	1	T	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	1.915	12.36	-2.21	-0.730	-0.426	0.528	1.91483	1.91483	NA	0.151847	0.070936	NA	0.08	NA	8.544253
798	2	220348751	220348751	C	T	exonic	SPEG	NA	nonsynonymous SNV	SPEG:NM_005876:exon30:c.C6566T:p.P2189L	exonic	ENSG00000072195	NA	nonsynonymous SNV	ENSG00000072195:ENST00000312358:exon30:c.C6566T:p.P2189L	NA	NA	2q35	NA	Name=CTCF	NA	NA	rs10755037	0.24	0.24	0.226	0.285543	0.2694	0.1448	0.2738	0.289	0.4509	0.27	0.16	0.3	0.26	0.2739	0.3	0.08	T	0.0	B	0.0	B	0.167	N	1.000	P	0.55	N	-0.13	T	-1.039	T	0.000	T	0.033	-1.75	0.01	1.85	0.351	2.969	10.706	-1.750379	NA	0.01	0.246361	0.259942	ID=COSM442355;OCCURENCE=2(breast)	0.152	NA	8.5436724
798	12	10339178	10339178	C	T	exonic	TMEM52B	NA	synonymous SNV	TMEM52B:NM_153022:exon3:c.C237T:p.S79S	exonic	ENSG00000165685	NA	synonymous SNV	ENSG00000165685:ENST00000298530:exon3:c.C237T:p.S79S,ENSG00000165685:ENST00000536952:exon4:c.C297T:p.S99S,ENSG00000165685:ENST00000381923:exon5:c.C297T:p.S99S	Score=448;Name=lod=88	NA	12p13.2	Score=902;Name=V$OCT1_06	NA	Name=5	NA	rs4764308	0.02	0.02	0.016	0.0133786	0.0477	NA	0.013	0.0023	0.0072	0.05	NA	0.02	0.002	0.0304	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.991234	NA	NA	0.045581	0.009986	NA	0.014	NA	8.5429856
798	2	218674697	218674697	C	T	exonic	TNS1	NA	nonsynonymous SNV	TNS1:NM_022648:exon30:c.G4810A:p.V1604I	exonic	ENSG00000079308	NA	nonsynonymous SNV	ENSG00000079308:ENST00000446688:exon12:c.G2224A:p.V742I,ENSG00000079308:ENST00000430930:exon27:c.G4747A:p.V1583I,ENSG00000079308:ENST00000419504:exon28:c.G4768A:p.V1590I,ENSG00000079308:ENST00000171887:exon30:c.G4810A:p.V1604I	Score=576;Name=lod=291	NA	2q35	NA	NA	NA	NA	rs918949	0.62	0.62	0.629	0.610224	0.5865	0.505	0.5922	0.8071	0.4898	0.6	0.5	0.62	0.79	0.5949	0.79	0.62	T	0.0	B	0.003	B	0.029	N	0.000	P	-1.69	N	0.97	T	-0.934	T	0.000	T	0.085	-0.728	0.884	-4.71	-1.539	0.655	15.396	-0.727836	NA	0.84	0.610581	0.768498	NA	0.659	NA	8.5413524
798	18	8720368	8720368	C	T	exonic	SOGA2	NA	synonymous SNV	SOGA2:NM_015210:exon4:c.C231T:p.H77H	exonic	ENSG00000168502	NA	synonymous SNV	ENSG00000168502:ENST00000306329:exon3:c.C1311T:p.H437H,ENSG00000168502:ENST00000517570:exon3:c.C231T:p.H77H,ENSG00000168502:ENST00000359865:exon4:c.C231T:p.H77H,ENSG00000168502:ENST00000400050:exon4:c.C231T:p.H77H	Score=610;Name=lod=401	NA	18p11.22	Score=871;Name=V$HLF_01	NA	Name=2	NA	rs73939505	0.05	0.05	0.047	0.0607029	0.0358	0.0308	0.0303	0.1112	0.0706	0.04	0.03	0.04	0.1	0.0508	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.791448	NA	NA	0.039302	0.099183	NA	0.036	NA	8.5407646
798	19	44890801	44890801	T	C	exonic	ZNF285	NA	nonsynonymous SNV	ZNF285:NM_152354:exon4:c.A1606G:p.R536G	exonic	ENSG00000267508	NA	nonsynonymous SNV	ENSG00000267508:ENST00000330997:exon4:c.A1606G:p.R536G,ENSG00000267508:ENST00000544719:exon4:c.A1606G:p.R536G,ENSG00000267508:ENST00000591679:exon5:c.A1627G:p.R543G	Score=381;Name=lod=47	NA	19q13.31	NA	NA	NA	NA	rs12610859	0.44	0.44	0.401	0.432907	0.6382	0.1845	0.464	0.379	0.5286	0.65	0.18	0.49	0.38	0.5381	0.65	1	T	0.0	B	0.0	B	.	.	0.000	P	-1.77	N	2.77	T	-0.960	T	0.000	T	0.125	-0.12	3.413	3.6	0.643	1.725	10.394	-0.11975	NA	1	0.616279	0.425783	NA	0.507	NA	8.5407544
798	4	8242499	8242499	G	A	exonic	SH3TC1	NA	synonymous SNV	SH3TC1:NM_018986:exon18:c.G3828A:p.Q1276Q	exonic	ENSG00000125089	NA	synonymous SNV	ENSG00000125089:ENST00000245105:exon18:c.G3828A:p.Q1276Q,ENSG00000125089:ENST00000539824:exon18:c.G3600A:p.Q1200Q	Score=550;Name=lod=230	NA	4p16.1	NA	Name=c-Myc,Max	Name=5	NA	rs1048506	0.02	0.02	0.018	0.0233626	0.0378	NA	0.0216	0.0008	0.0644	0.04	NA	0.03	0.002	0.039	0.051	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.397793	1.397793	NA	0.05093	0.012029	NA	0.072	NA	8.5389366
798	1	156011444	156011444	T	C	exonic	UBQLN4	NA	nonsynonymous SNV	UBQLN4:NM_020131:exon10:c.A1485G:p.I495M	exonic	ENSG00000160803	NA	nonsynonymous SNV	ENSG00000160803:ENST00000368307:exon6:c.A442G:p.I148V,ENSG00000160803:ENST00000368309:exon10:c.A1485G:p.I495M	Score=475;Name=lod=114	NA	1q22	Score=946;Name=V$IK2_01	NA	NA	NA	rs2297792	0.42	0.42	0.422	0.433107	0.6014	0.1438	0.5461	0.3782	0.5521	0.59	0.13	0.51	0.42	0.5802	0.61	0.28	T	0.019	B	0.004	B	0.070	N	1.000	P	0.345	N	0.53	T	-1.026	T	0.021	T	0.034	1.342	10.41	2.56	0.568	0.417	4.360	1.342255	1.342255	0.62	0.613398	0.436107	NA	0.471	NA	8.5383354
798	11	4869906	4869906	A	C	exonic	OR51S1	NA	nonsynonymous SNV	OR51S1:NM_001004758:exon1:c.T533G:p.L178R	exonic	ENSG00000176922	NA	nonsynonymous SNV	ENSG00000176922:ENST00000322101:exon1:c.T533G:p.L178R	NA	NA	11p15.4	NA	NA	NA	NA	rs7117260	0.44	0.44	0.45	0.501797	0.6054	0.0942	0.4135	0.6233	0.7137	0.58	0.08	0.48	0.61	0.5654	0.63	1	T	0.0	B	0.0	B	0.795	N	0.999	P	-1.855	N	1.23	T	-0.956	T	0.000	T	0.021	-1.965	0.007	-8.88	-2.327	-5.132	11.681	-1.965406	NA	1	0.626338	0.598137	NA	0.529	NA	8.5361954
798	22	42538029	42538029	A	G	ncRNA_exonic	CYP2D7P1	NA	NA	NA	exonic	ENSG00000205702	NA	unknown	UNKNOWN	NA	NA	22q13.2	Score=818;Name=V$PPARG_03	NA	NA	NA	rs1058167	0.59	0.59	0.532	0.553315	0.661	0.8482	0.6455	0.1331	0.6411	0.67	0.83	0.67	0.13	0.6363	0.83	.	.	0.995	D	0.967	D	0.010	N	0.997	P	.	.	.	.	-1.000	T	0.000	T	.	0.038	4.21	1.26	0.570	2.586	3.669	0.037841	NA	0.02	NA	NA	NA	0.471	NA	8.5360333
798	15	40265799	40265799	A	G	exonic	EIF2AK4	NA	nonsynonymous SNV	EIF2AK4:NM_001013703:exon11:c.A1667G:p.E556G	exonic	ENSG00000128829	NA	nonsynonymous SNV	ENSG00000128829:ENST00000263791:exon11:c.A1667G:p.E556G,ENSG00000128829:ENST00000382727:exon11:c.A1667G:p.E556G,ENSG00000128829:ENST00000559624:exon11:c.A1667G:p.E556G	Score=422;Name=lod=69	NA	15q15.1	NA	NA	NA	NA	rs2307105	0.86	0.86	0.877	0.844449	0.9463	0.7788	0.6988	0.8971	0.8395	0.95	0.77	0.77	0.9	0.8883	0.96	0.64	T	0.0	B	0.0	B	0.003	N	0.000	P	-1.61	N	-0.45	T	-0.963	T	0.000	T	0.249	2.05	12.81	4.97	1.535	1.363	9.406	2.049686	2.049686	0.63	0.96312	0.898376	NA	0.877	NA	8.5356134
799	17	7849087	7849087	C	G	exonic	CNTROB	NA	synonymous SNV	CNTROB:NM_001037144:exon13:c.C1776G:p.P592P,CNTROB:NM_053051:exon13:c.C1776G:p.P592P	exonic	ENSG00000170037	NA	nonsynonymous SNV	ENSG00000170037:ENST00000380255:exon12:c.C1613G:p.P538R	NA	NA	17p13.1	NA	NA	NA	NA	rs4462665	0.58	0.58	0.553	0.63099	0.4493	0.8016	0.67	0.5424	0.7342	0.46	0.74	0.61	0.56	0.5562	0.74	0.32	T	.	.	.	.	0.213	N	0.285	P	.	.	0.87	T	-1.049	T	0.000	T	.	-1.016	0.238	-5.31	-1.742	-1.603	7.964	-1.015843	NA	0	0.459651	0.554471	ID=COSM1387480;OCCURENCE=1(large_intestine)	0.536	NA	8.534849
799	6	152473181	152473181	T	C	exonic	SYNE1	NA	synonymous SNV	SYNE1:NM_033071:exon133:c.A24012G:p.A8004A,SYNE1:NM_182961:exon134:c.A24225G:p.A8075A	exonic	ENSG00000131018	NA	synonymous SNV	ENSG00000131018:ENST00000354674:exon5:c.A690G:p.A230A,ENSG00000131018:ENST00000539504:exon5:c.A690G:p.A230A,ENSG00000131018:ENST00000367257:exon14:c.A2163G:p.A721A,ENSG00000131018:ENST00000367251:exon19:c.A2991G:p.A997A,ENSG00000131018:ENST00000356820:exon49:c.A7797G:p.A2599A,ENSG00000131018:ENST00000423061:exon133:c.A24012G:p.A8004A,ENSG00000131018:ENST00000265368:exon134:c.A24225G:p.A8075A,ENSG00000131018:ENST00000367255:exon134:c.A24225G:p.A8075A,ENSG00000131018:ENST00000448038:exon134:c.A24012G:p.A8004A,ENSG00000131018:ENST00000341594:exon135:c.A23061G:p.A7687A	NA	NA	6q25.1	NA	Name=GATA-2	Name=19	NA	rs910415	0.04	0.04	0.039	0.0365415	0.0487	0.001	0.0476	0.0628	0.0174	0.04	NA	0.06	0.07	0.0397	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.115338	NA	NA	0.04407	0.060145	NA	0.043	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118465.2;CLNDSDB=.;CLNDSDBID=.	8.5341966
799	6	32811645	32811645	A	G	exonic	PSMB8	NA	synonymous SNV	PSMB8:NM_148919:exon1:c.T129C:p.A43A	exonic	ENSG00000204264	NA	synonymous SNV	ENSG00000204264:ENST00000374882:exon1:c.T129C:p.A43A,ENSG00000204264:ENST00000395339:exon1:c.T129C:p.A43A	Score=454;Name=lod=93	NA	6p21.32	Score=854;Name=V$OLF1_01	Name=RFX5_(N-494),Pol2,Pol2-4H8	NA	NA	rs2071542	0.05	0.05	0.055	0.0545128	0.0417	0.0625	0.0605	0.0408	0.0736	0.05	0.07	0.07	0.04	0.0538	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.600489	1.600489	NA	0.037112	0.035785	NA	0.065	NA	8.5340546
799	5	141335498	141335498	C	T	exonic	PCDH12	NA	nonsynonymous SNV	PCDH12:NM_016580:exon1:c.G1919A:p.S640N	exonic	ENSG00000113555	NA	nonsynonymous SNV	ENSG00000113555:ENST00000231484:exon1:c.G1919A:p.S640N	NA	NA	5q31.3	NA	NA	NA	NA	rs164515	0.17	0.17	0.14	0.14996	0.2664	0.127	0.196	0.0227	0.1933	0.27	0.12	0.22	0.03	0.2367	0.3	0.26	T	0.0	B	0.002	B	0.316	N	1.000	P	1.32	L	-1.7	D	-1.097	T	0.000	T	0.004	-1.565	0.015	2.7	0.424	0.609	4.911	-1.564822	NA	0.46	0.298488	0.070586	NA	0.159	NA	8.5317454
799	1	39797055	39797055	A	G	intronic	MACF1	NA	NA	NA	exonic	ENSG00000127603	NA	nonsynonymous SNV	ENSG00000127603:ENST00000289893:exon1:c.A115G:p.I39V,ENSG00000127603:ENST00000372915:exon36:c.A4810G:p.I1604V,ENSG00000127603:ENST00000564288:exon37:c.A4795G:p.I1599V,ENSG00000127603:ENST00000567887:exon37:c.A4906G:p.I1636V	NA	NA	1p34.3	NA	NA	Name=6	NA	rs16826069	0.18	0.18	0.141	0.159944	0.1978	0.2629	0.2507	0.0129	0.1493	0.2	0.26	0.24	0.02	0.2123	0.26	0.18	T	0.0	B	0.0	B	0.551	N	0.000	P	0	N	-0.68	T	-1.090	T	0.000	T	0.058	-0.18	3.123	-7.75	-1.757	-0.110	4.575	-0.180089	NA	NA	0.226163	0.0463	NA	0.152	NA	8.5304037
799	1	32092525	32092525	A	G	exonic	HCRTR1	NA	nonsynonymous SNV	HCRTR1:NM_001525:exon9:c.A1222G:p.I408V	exonic	ENSG00000121764	NA	nonsynonymous SNV	ENSG00000121764:ENST00000373706:exon7:c.A1222G:p.I408V,ENSG00000121764:ENST00000403528:exon9:c.A1222G:p.I408V	Score=631;Name=lod=489	NA	1p35.2	NA	NA	NA	NA	rs2271933	0.43	0.43	0.405	0.439696	0.6332	0.244	0.5086	0.2753	0.6155	0.62	0.26	0.53	0.26	0.5567	0.62	1	T	0.0	B	0.001	B	0.001	N	0.000	P	-0.345	N	0.31	T	-0.925	T	0.000	T	0.111	-0.715	0.922	3.78	0.690	1.595	8.216	-0.715416	NA	1	0.61407	0.309578	ID=COSM1341730;OCCURENCE=1(large_intestine)	0.558	NA	8.5293634
799	20	42320881	42320881	C	T	exonic	MYBL2	NA	synonymous SNV	MYBL2:NM_002466:exon6:c.C585T:p.D195D	exonic	ENSG00000101057	NA	synonymous SNV	ENSG00000101057:ENST00000396863:exon5:c.C513T:p.D171D,ENSG00000101057:ENST00000217026:exon6:c.C585T:p.D195D	Score=389;Name=lod=51	NA	20q13.12	NA	Name=CTCF,Rad21,YY1_(C-20),SMC3_(ab9263),Znf143_(16618-1-AP),CTCF_(SC-5916)	Name=107	NA	rs2229036	0.06	0.06	0.05	0.0505192	0.0447	0.0754	0.0375	0.0295	0.0685	0.05	0.09	0.03	0.05	0.0472	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.553635	NA	NA	0.04593	0.029959	NA	0.014	NA	8.5288366
799	11	72040784	72040784	T	C	exonic	CLPB	NA	synonymous SNV	CLPB:NM_001258393:exon5:c.A753G:p.E251E,CLPB:NM_001258392:exon6:c.A840G:p.E280E,CLPB:NM_030813:exon7:c.A930G:p.E310E,CLPB:NM_001258394:exon8:c.A795G:p.E265E	exonic	ENSG00000162129	NA	synonymous SNV	ENSG00000162129:ENST00000340729:exon5:c.A753G:p.E251E,ENSG00000162129:ENST00000543042:exon5:c.A327G:p.E109E,ENSG00000162129:ENST00000544683:exon5:c.A402G:p.E134E,ENSG00000162129:ENST00000535477:exon6:c.A840G:p.E280E,ENSG00000162129:ENST00000538039:exon6:c.A840G:p.E280E,ENSG00000162129:ENST00000294053:exon7:c.A930G:p.E310E,ENSG00000162129:ENST00000437826:exon8:c.A795G:p.E265E,ENSG00000162129:ENST00000535990:exon8:c.A945G:p.E315E	Score=505;Name=lod=150	NA	11q13.4	NA	NA	NA	NA	rs36049191	0.12	0.12	0.126	0.135383	0.0398	0.1577	0.0937	0.27	0.0583	0.04	0.14	0.1	0.24	0.0673	0.24	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.061	T	0.000	T	.	-0.657	1.116	2.39	0.195	0.048	8.406	-0.656719	NA	NA	0.030864	0.214773	NA	0.145	NA	8.5287026
799	1	89237556	89237556	C	T	exonic	PKN2	NA	synonymous SNV	PKN2:NM_006256:exon6:c.C979T:p.L327L	exonic	ENSG00000065243	NA	synonymous SNV	ENSG00000065243:ENST00000370505:exon5:c.C508T:p.L170L,ENSG00000065243:ENST00000316005:exon6:c.C979T:p.L327L,ENSG00000065243:ENST00000370513:exon6:c.C979T:p.L327L,ENSG00000065243:ENST00000370521:exon6:c.C979T:p.L327L	Score=725;Name=lod=1176	NA	1p22.2	NA	NA	NA	NA	rs9651072	0.11	0.11	0.127	0.132987	0.0447	0.0337	0.049	0.3593	0.0798	0.05	0.04	0.05	0.34	0.0672	0.34	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.067	T	0.077	T	.	0.672	7.597	1.36	0.051	1.406	9.095	0.672052	NA	NA	0.026488	0.28095	NA	0.188	NA	8.5282786
799	19	44303066	44303066	C	G	exonic	LYPD5	NA	nonsynonymous SNV	LYPD5:NM_001031749:exon3:c.G268C:p.A90P,LYPD5:NM_182573:exon3:c.G139C:p.A47P	exonic	ENSG00000159871	NA	nonsynonymous SNV	ENSG00000159871:ENST00000594013:exon2:c.G139C:p.A47P,ENSG00000159871:ENST00000377950:exon3:c.G268C:p.A90P,ENSG00000159871:ENST00000414615:exon3:c.G139C:p.A47P,ENSG00000159871:ENST00000594049:exon3:c.G139C:p.A47P,ENSG00000159871:ENST00000602179:exon3:c.G139C:p.A47P	NA	NA	19q13.31	NA	Name=Egr-1,Pol2-4H8,ZNF263,JunD,IRF1,Pol2,ELF1_(SC-631),FOSL1_(SC-183)	Name=53	NA	rs11547806	0.57	0.57	0.562	0.621406	0.5765	0.5437	0.634	0.5772	0.7986	0.56	0.53	0.66	0.56	0.6451	0.66	0.45	T	0.004	B	0.001	B	0.047	N	1.000	P	0	N	3.22	T	-0.902	T	0.000	T	0.022	1.17	9.759	-4.2	-0.792	-0.157	2.752	1.169584	NA	0.3	0.584807	0.59473	ID=COSM1129805;OCCURENCE=1(prostate)	0.609	NA	8.5269264
799	14	102815042	102815042	C	T	exonic	CINP	NA	nonsynonymous SNV	CINP:NM_001177611:exon5:c.G536A:p.R179H,CINP:NM_032630:exon5:c.G491A:p.R164H	exonic	ENSG00000100865	NA	nonsynonymous SNV	ENSG00000100865:ENST00000216756:exon5:c.G491A:p.R164H,ENSG00000100865:ENST00000536961:exon5:c.G536A:p.R179H,ENSG00000100865:ENST00000559514:exon5:c.G491A:p.R164H	Score=432;Name=lod=76	NA	14q32.31	NA	NA	NA	NA	rs7011	0.16	0.16	0.173	0.164936	0.2654	0.1081	0.1643	0.0756	0.2413	0.26	0.09	0.17	0.08	0.244	0.3	0.27	T	0.054	B	0.004	B	0.010	N	0.000	P	1.6	L	0.67	T	-1.017	T	0.000	T	0.244	1.44	10.76	2.76	0.644	0.621	9.449	1.440241	1.440241	0.25	0.298837	0.104857	NA	0.181	NA	8.5250964
799	19	56424443	56424443	T	C	exonic	NLRP13	NA	nonsynonymous SNV	NLRP13:NM_176810:exon5:c.A740G:p.Q247R	exonic	ENSG00000173572	NA	nonsynonymous SNV	ENSG00000173572:ENST00000342929:exon5:c.A740G:p.Q247R,ENSG00000173572:ENST00000588751:exon5:c.A740G:p.Q247R	NA	NA	19q13.43	NA	NA	NA	NA	rs303997	0.64	0.64	0.639	0.664736	0.5924	0.7302	0.5101	0.7405	0.6789	0.58	0.71	0.54	0.73	0.6065	0.73	0.17	T	0.13	B	0.088	B	.	.	1.000	P	-0.04	N	-1.05	T	-0.941	T	0.000	T	0.08	1.785	11.93	2.81	1.271	4.167	7.721	1.785132	1.785132	0.07	0.609419	0.713799	ID=COSM1396740;OCCURENCE=1(large_intestine)	0.746	NA	8.5250144
800	15	93588289	93588289	G	A	exonic	RGMA	NA	nonsynonymous SNV	RGMA:NM_001166286:exon3:c.C1244T:p.A415V,RGMA:NM_001166283:exon4:c.C1316T:p.A439V,RGMA:NM_001166287:exon4:c.C1244T:p.A415V,RGMA:NM_001166288:exon4:c.C1244T:p.A415V,RGMA:NM_001166289:exon4:c.C1244T:p.A415V,RGMA:NM_020211:exon4:c.C1292T:p.A431V	exonic	ENSG00000182175	NA	nonsynonymous SNV	ENSG00000182175:ENST00000542321:exon3:c.C1244T:p.A415V,ENSG00000182175:ENST00000329082:exon4:c.C1292T:p.A431V,ENSG00000182175:ENST00000425933:exon4:c.C1244T:p.A415V,ENSG00000182175:ENST00000543599:exon4:c.C1244T:p.A415V,ENSG00000182175:ENST00000557301:exon4:c.C1316T:p.A439V,ENSG00000182175:ENST00000538818:exon5:c.C965T:p.A322V,ENSG00000182175:ENST00000556658:exon5:c.C965T:p.A322V	NA	NA	15q26.1	NA	NA	NA	NA	rs4778078	0.23	0.23	0.214	0.260583	0.2624	0.1835	0.3069	0.233	0.3425	0.26	0.17	0.29	0.21	0.3171	0.29	0.05	D	0.001	B	0.001	B	0.442	U	0.937	P	1.1	L	-2.44	D	-1.042	T	0.000	T	0.097	2.388	13.94	0.123	0.075	0.076	8.947	2.387976	2.387976	0.1	0.231033	0.210084	NA	0.261	NA	8.5228004
800	14	55907172	55907172	C	G	exonic	TBPL2	NA	nonsynonymous SNV	TBPL2:NM_199047:exon1:c.G92C:p.R31P	exonic	ENSG00000182521	NA	nonsynonymous SNV	ENSG00000182521:ENST00000247219:exon1:c.G92C:p.R31P	NA	NA	14q22.3	NA	Name=YY1_(C-20),TAF1,USF2,CTCF,TBP	NA	NA	rs8019270	0.68	0.68	0.671	0.684704	0.5984	0.6349	0.7291	0.8079	0.6268	0.6	0.64	0.75	0.79	0.6334	0.79	0.18	T	0.0	B	0.0	B	0.683	N	1.000	P	0	N	0.9	T	-0.987	T	0.000	T	0.01	0.346	5.876	-3.98	-1.351	-0.407	6.045	0.345715	NA	0.18	0.579348	0.776267	ID=COSM433153;OCCURENCE=2(breast)	0.645	NA	8.5221854
800	3	111985107	111985107	T	C	exonic	SLC9C1	NA	nonsynonymous SNV	SLC9C1:NM_183061:exon8:c.A856G:p.I286V	exonic	ENSG00000172139	NA	nonsynonymous SNV	ENSG00000172139:ENST00000471295:exon6:c.A694G:p.I232V,ENSG00000172139:ENST00000305815:exon8:c.A856G:p.I286V,ENSG00000172139:ENST00000487372:exon8:c.A856G:p.I286V	Score=448;Name=lod=88	NA	3q13.2	NA	NA	NA	NA	rs9872691	0.31	0.31	0.281	0.329073	0.2376	0.3393	0.4035	0.3449	0.3384	0.24	0.32	0.38	0.35	0.3035	0.38	0.71	T	0.001	B	0.002	B	0.257	N	1.000	P	-0.9	N	3.95	T	-0.970	T	0.000	T	0.01	-1.855	0.009	3.23	0.647	0.291	7.857	-1.855283	NA	1	0.270484	0.336586	NA	0.275	NA	8.5217494
800	4	76489582	76489582	G	A	exonic	C4orf26	NA	nonsynonymous SNV	C4orf26:NM_178497:exon2:c.G326A:p.R109H,C4orf26:NM_001206981:exon3:c.G370A:p.V124I	exonic	ENSG00000174792	NA	nonsynonymous SNV	ENSG00000174792:ENST00000311623:exon2:c.G326A:p.R109H,ENSG00000174792:ENST00000435974:exon3:c.G370A:p.V124I	NA	NA	4q21.1	NA	NA	NA	NA	rs2306174	0.13	0.13	0.143	0.152356	0.0915	0.1865	0.0677	0.1672	0.2198	0.09	0.19	0.08	0.18	0.1197	0.22	.	.	0.929	P	0.28	B	0.005	N	1.000	P	0.55	N	1.4	T	-1.045	T	0.000	T	.	0.937	8.818	-4.61	-0.823	-0.293	0.509	0.936783	NA	0.18	0.100814	0.13527	NA	0.167	NA	8.5213194
800	18	30804758	30804758	A	C	exonic	CCDC178	NA	nonsynonymous SNV	CCDC178:NM_001105528:exon16:c.T1799G:p.L600R,CCDC178:NM_198995:exon17:c.T1799G:p.L600R	exonic	ENSG00000166960	NA	nonsynonymous SNV	ENSG00000166960:ENST00000581524:exon4:c.T440G:p.L147R,ENSG00000166960:ENST00000402325:exon15:c.T1799G:p.L600R,ENSG00000166960:ENST00000406524:exon15:c.T1799G:p.L600R,ENSG00000166960:ENST00000403303:exon16:c.T1799G:p.L600R,ENSG00000166960:ENST00000583930:exon16:c.T1799G:p.L600R,ENSG00000166960:ENST00000300227:exon17:c.T1799G:p.L600R,ENSG00000166960:ENST00000383096:exon17:c.T1799G:p.L600R,ENSG00000166960:ENST00000579947:exon17:c.T1799G:p.L600R	NA	NA	18q12.1	NA	NA	NA	NA	rs457896	0.16	0.16	0.16	0.164337	0.1093	0.1121	0.1023	0.3517	0.0654	0.1	0.12	0.1	0.33	0.1083	0.33	0.38	T	0.799	P	0.295	B	.	.	1.000	P	1.245	L	2.25	T	-0.965	T	0.000	T	0.177	0.16	4.86	-3.98	-0.699	0.025	7.184	0.159803	NA	0	0.096279	0.288828	ID=COSM1388465,COSM1388466;OCCURENCE=1(large_intestine)	NA	NA	8.5194544
800	11	7817856	7817856	C	T	exonic	OR5P2	NA	nonsynonymous SNV	OR5P2:NM_153444:exon1:c.G634A:p.V212I	exonic	ENSG00000183303	NA	nonsynonymous SNV	ENSG00000183303:ENST00000329434:exon1:c.G634A:p.V212I	NA	NA	11p15.4	NA	NA	NA	NA	rs78460198	0.27	0.27	0.256	0.236621	0.2763	0.128	0.2911	0.3472	0.1196	0.29	0.15	0.28	0.37	0.2552	0.37	1	T	0.008	B	0.021	B	0.602	N	1.000	P	0.08	N	1.21	T	-0.974	T	0.000	T	0.012	-2.12	0.005	-11.0	-3.387	-6.285	20.776	-2.11952	NA	1	0.282502	0.325653	ID=COSM179925;OCCURENCE=1(large_intestine),1(central_nervous_system)	0.254	NA	8.5193314
800	19	59082605	59082605	C	T	exonic	MZF1	NA	nonsynonymous SNV	MZF1:NM_001267033:exon2:c.G152A:p.R51H,MZF1:NM_003422:exon2:c.G152A:p.R51H,MZF1:NM_198055:exon2:c.G152A:p.R51H	exonic	ENSG00000099326	NA	nonsynonymous SNV	ENSG00000099326:ENST00000215057:exon2:c.G152A:p.R51H,ENSG00000099326:ENST00000594108:exon2:c.G152A:p.R51H,ENSG00000099326:ENST00000594234:exon2:c.G152A:p.R51H,ENSG00000099326:ENST00000599369:exon2:c.G152A:p.R51H,ENSG00000099326:ENST00000596039:exon3:c.G152A:p.R51H	NA	NA	19q13.43	NA	NA	Name=3	NA	rs3752109	0.23	0.23	0.208	0.207069	0.2744	0.2996	0.2378	0.0688	0.2076	0.29	0.3	0.24	0.08	0.2572	0.3	.	.	0.002	B	0.002	B	0.996	N	1.000	P	1.37	L	3.65	T	-0.921	T	0.000	T	0.075	1.044	9.266	-1.86	-0.298	-2.046	7.716	1.044385	NA	0.15	0.282856	0.093282	NA	0.188	NA	8.5188774
800	5	13788886	13788886	C	A	exonic	DNAH5	NA	nonsynonymous SNV	DNAH5:NM_001369:exon51:c.G8586T:p.L2862F	exonic	ENSG00000039139	NA	nonsynonymous SNV	ENSG00000039139:ENST00000265104:exon51:c.G8586T:p.L2862F	Score=401;Name=lod=57	NA	5p15.2	NA	NA	NA	NA	rs10513155	0.22	0.22	0.199	0.208666	0.2744	0.2173	0.2608	0.1256	0.2076	0.27	0.21	0.22	0.16	0.2524	0.29	0.44	T	0.0	B	0.003	B	0.442	N	0.960	P	0.895	L	1.78	T	-0.946	T	0.000	T	0.024	0.4	6.173	4.02	0.745	-0.096	5.576	0.400141	NA	0.64	0.288605	0.163187	NA	0.239	NA	8.5179284
800	19	36048741	36048741	G	T	exonic	ATP4A	NA	synonymous SNV	ATP4A:NM_000704:exon11:c.C1509A:p.I503I	exonic	ENSG00000105675	NA	synonymous SNV	ENSG00000105675:ENST00000262623:exon11:c.C1509A:p.I503I	Score=435;Name=lod=78	NA	19q13.12	Score=772;Name=V$PAX5_02	Name=ZBTB7A_(SC-34508),CTCF,Rad21,CTCFL_(SC-98982),E2F6_(H-50)	Name=99	NA	rs2230181	0.29	0.29	0.295	0.280751	0.4105	0.2659	0.2277	0.174	0.3446	0.41	0.26	0.27	0.17	0.3894	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.513504	1.513504	NA	0.349513	0.17803	NA	0.232	NA	8.5172536
800	2	112686988	112686988	G	A	exonic	MERTK	NA	nonsynonymous SNV	MERTK:NM_006343:exon2:c.G353A:p.S118N	exonic	ENSG00000153208	NA	nonsynonymous SNV	ENSG00000153208:ENST00000295408:exon2:c.G353A:p.S118N,ENSG00000153208:ENST00000421804:exon2:c.G353A:p.S118N	NA	NA	2q13	NA	NA	NA	NA	rs13027171	0.16	0.16	0.15	0.168131	0.2853	0.1726	0.1844	0.0219	0.229	0.25	0.12	0.22	0.02	0.2313	0.3	0.41	T	0.001	B	0.001	B	0.620	N	0.557	P	-0.205	N	-0.34	T	-1.025	T	0.000	T	0.003	-0.574	1.417	-3.98	-0.649	-0.287	11.622	-0.574024	NA	0.59	0.299884	0.069678	NA	0.181	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000081390.1;CLNDSDB=.;CLNDSDBID=.	8.5168494
800	3	148904434	148904434	T	G	exonic	CP	NA	synonymous SNV	CP:NM_000096:exon11:c.A1950C:p.G650G	exonic	ENSG00000047457	NA	synonymous SNV	ENSG00000047457:ENST00000494544:exon8:c.A1299C:p.G433G,ENSG00000047457:ENST00000264613:exon11:c.A1950C:p.G650G	Score=472;Name=lod=111	NA	3q25.1	NA	Name=eGFP-GATA2	NA	NA	rs1053709	0.02	0.02	0.02	0.0195687	0.0457	0.001	0.036	0.0008	0.0256	0.04	0.0017	0.04	0.0041	0.0439	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.405346	1.405346	NA	0.060465	0.013391	NA	0.065	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116817.1;CLNDSDB=.;CLNDSDBID=.	8.5166016
800	22	50682865	50682865	G	A	exonic	TUBGCP6	NA	synonymous SNV	TUBGCP6:NM_020461:exon1:c.C24T:p.F8F	exonic	ENSG00000128159	NA	synonymous SNV	ENSG00000128159:ENST00000248846:exon1:c.C24T:p.F8F,ENSG00000128159:ENST00000439308:exon1:c.C24T:p.F8F	Score=526;Name=lod=183	NA	22q13.33	Score=889;Name=V$E47_02	Name=NF-YA,GABP,ELF1_(SC-631),ZEB1_(SC-25388),NFKB	Name=133	NA	rs5771270	0.29	0.29	0.277	0.28155	0.4026	0.3562	0.2478	0.0802	0.3763	0.39	0.34	0.23	0.13	0.36	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.876131	1.876131	NA	0.388837	0.140263	ID=COSM445163;OCCURENCE=1(breast)	0.261	NA	8.5152296
801	1	200880869	200880869	A	C	exonic	C1orf106	NA	nonsynonymous SNV	C1orf106:NM_001142569:exon9:c.A1248C:p.R416S,C1orf106:NM_018265:exon9:c.A1545C:p.R515S	exonic	ENSG00000163362	NA	nonsynonymous SNV	ENSG00000163362:ENST00000367342:exon9:c.A1503C:p.R501S,ENSG00000163362:ENST00000413687:exon9:c.A1248C:p.R416S	NA	NA	1q32.1	NA	NA	NA	NA	rs45547233	0.08	0.08	0.053	0.0595048	0.1054	0.1091	0.0461	0.0091	0.0389	0.11	0.11	0.05	0.01	0.0984	0.12	0.74	T	0.608	P	0.143	B	0.435	N	0.963	P	0.55	N	1.5	T	-1.082	T	0.001	T	0.217	0.727	7.865	-2.97	-0.319	0.652	4.172	0.72699	NA	0.33	0.115223	0.025658	ID=COSM1337743;OCCURENCE=1(large_intestine)	0.022	NA	8.5143104
801	19	10475652	10475652	C	A	exonic	TYK2	NA	nonsynonymous SNV	TYK2:NM_003331:exon8:c.G1084T:p.V362F	exonic	ENSG00000105397	NA	nonsynonymous SNV	ENSG00000105397:ENST00000524462:exon4:c.G529T:p.V177F,ENSG00000105397:ENST00000264818:exon6:c.G1084T:p.V362F,ENSG00000105397:ENST00000525621:exon8:c.G1084T:p.V362F,ENSG00000105397:ENST00000529370:exon8:c.G1084T:p.V362F	NA	Name=Type 1 diabetes autoantibodies,Type 1 diabetes	19p13.2	NA	NA	NA	NA	rs2304256	0.29	0.29	0.273	0.265775	0.2624	0.5238	0.1945	0.0893	0.2924	0.28	0.47	0.23	0.12	0.2768	0.47	0.05	D	0.421	B	0.097	B	0.584	N	1.000	P	0.895	L	2.93	T	-0.915	T	0.000	T	0.186	1.261	10.11	-0.832	-0.107	-0.040	6.246	1.260535	1.260535	0.32	0.280349	0.115751	NA	0.116	NA	8.5137844
801	19	6901891	6901891	G	A	exonic	EMR1	NA	nonsynonymous SNV	EMR1:NM_001256252:exon5:c.G364A:p.D122N,EMR1:NM_001256253:exon6:c.G520A:p.D174N,EMR1:NM_001974:exon6:c.G520A:p.D174N	exonic	ENSG00000174837	NA	nonsynonymous SNV	ENSG00000174837:ENST00000595026:exon4:c.G418A:p.D140N,ENSG00000174837:ENST00000381404:exon5:c.G364A:p.D122N,ENSG00000174837:ENST00000250572:exon6:c.G520A:p.D174N,ENSG00000174837:ENST00000312053:exon6:c.G520A:p.D174N	Score=321;Name=lod=27	NA	19p13.2	NA	NA	NA	NA	rs897738	0.42	0.42	0.43	0.433307	0.2396	0.4563	0.4193	0.6664	0.3037	0.24	0.5	0.38	0.65	0.3231	0.65	0.48	T	0.033	B	0.03	B	.	.	0.000	P	0.58	N	-3.39	D	-0.926	T	0.000	T	0.017	0.347	5.882	1.81	0.170	0.319	7.092	0.346823	NA	0.3	0.257093	0.58897	NA	0.399	NA	8.5135404
801	10	5204928	5204928	C	T	ncRNA_exonic	AKR1CL1	NA	NA	NA	exonic	ENSG00000196326	NA	nonsynonymous SNV	ENSG00000196326:ENST00000334314:exon2:c.G149A:p.R50H,ENSG00000196326:ENST00000488756:exon2:c.G149A:p.R50H	Score=235;Name=lod=12	NA	10p15.1	NA	NA	NA	NA	rs7097295	0.21	0.21	0.208	0.18151	0.3588	NA	0.183	0.2065	0.1513	0.35	NA	0.22	0.22	0.2742	0.35	0.05	D	.	.	.	.	0.006	N	1.000	P	.	.	1.62	T	-0.972	T	0.000	T	0.234	1.872	12.22	1.36	0.074	1.750	5.760	1.871827	1.871827	0.07	0.353488	0.231049	NA	0.145	NA	8.513512
801	8	41583441	41583441	T	C	exonic	ANK1	NA	synonymous SNV	ANK1:NM_000037:exon6:c.A450G:p.V150V,ANK1:NM_001142446:exon6:c.A549G:p.V183V,ANK1:NM_020475:exon6:c.A450G:p.V150V,ANK1:NM_020476:exon6:c.A450G:p.V150V,ANK1:NM_020477:exon6:c.A450G:p.V150V	exonic	ENSG00000029534	NA	synonymous SNV	ENSG00000029534:ENST00000265709:exon6:c.A549G:p.V183V,ENSG00000029534:ENST00000289734:exon6:c.A450G:p.V150V,ENSG00000029534:ENST00000347528:exon6:c.A450G:p.V150V,ENSG00000029534:ENST00000352337:exon6:c.A450G:p.V150V,ENSG00000029534:ENST00000379758:exon6:c.A450G:p.V150V,ENSG00000029534:ENST00000396942:exon6:c.A450G:p.V150V,ENSG00000029534:ENST00000396945:exon6:c.A450G:p.V150V	Score=525;Name=lod=181	NA	8p11.21	Score=773;Name=V$MIF1_01	NA	Name=3	NA	rs6982971	0.03	0.03	0.026	0.024361	0.0537	0.001	0.0504	0.0182	0.0082	0.06	NA	0.04	0.02	0.0464	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.088706	NA	NA	0.053256	0.02315	NA	0.072	NA	8.5133106
801	14	20444588	20444588	T	C	exonic	OR4K15	NA	nonsynonymous SNV	OR4K15:NM_001005486:exon1:c.T911C:p.L304P	exonic	ENSG00000169488	NA	nonsynonymous SNV	ENSG00000169488:ENST00000305051:exon1:c.T911C:p.L304P	NA	NA	14q11.2	NA	NA	NA	NA	rs2153466	0.32	0.32	0.334	0.376398	0.2435	0.1498	0.2017	0.7496	0.3661	0.25	0.14	0.19	0.72	0.2956	0.72	1	T	0.0	B	0.0	B	0.000	N	1.000	P	0	N	1.52	T	-0.956	T	0.000	T	0.064	-1.65	0.012	3.99	0.895	4.153	9.600	-1.649809	NA	1	0.28186	0.690195	NA	0.413	NA	8.5123734
801	17	16325968	16325968	A	G	exonic	TRPV2	NA	synonymous SNV	TRPV2:NM_016113:exon4:c.A390G:p.G130G	exonic	ENSG00000187688	NA	synonymous SNV	ENSG00000187688:ENST00000338560:exon4:c.A390G:p.G130G	NA	NA	17p11.2	NA	NA	NA	NA	rs8121	0.41	0.41	0.392	0.391374	0.3877	0.2321	0.3818	0.6475	0.2198	0.38	0.26	0.42	0.61	0.3766	0.61	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.918	T	0.000	T	.	-0.785	0.717	-5.94	-1.326	-1.548	0.438	-0.784796	NA	NA	0.391163	0.586927	ID=COSM148201;OCCURENCE=1(stomach)	0.442	NA	8.5112036
801	10	95163809	95163809	G	T	exonic	MYOF	NA	synonymous SNV	MYOF:NM_013451:exon9:c.C814A:p.R272R,MYOF:NM_133337:exon9:c.C814A:p.R272R	exonic	ENSG00000138119	NA	synonymous SNV	ENSG00000138119:ENST00000358334:exon9:c.C814A:p.R272R,ENSG00000138119:ENST00000359263:exon9:c.C814A:p.R272R,ENSG00000138119:ENST00000371489:exon9:c.C814A:p.R272R,ENSG00000138119:ENST00000371501:exon9:c.C814A:p.R272R,ENSG00000138119:ENST00000371502:exon9:c.C814A:p.R272R	Score=588;Name=lod=326	NA	10q23.33	NA	Name=ERalpha_a,c-Jun	Name=47	NA	rs12262721	0.1	0.1	0.115	0.0900559	0.0507	NA	0.0548	0.2663	0.0102	0.05	NA	0.07	0.31	0.055	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.216382	NA	NA	0.051055	0.223134	NA	0.109	NA	8.5099116
801	16	2259393	2259393	C	G	exonic	BRICD5	NA	synonymous SNV	BRICD5:NM_182563:exon6:c.G657C:p.V219V	exonic	ENSG00000182685	NA	synonymous SNV	ENSG00000182685:ENST00000562360:exon5:c.G753C:p.V251V,ENSG00000182685:ENST00000328540:exon6:c.G657C:p.V219V	Score=317;Name=lod=26	NA	16p13.3	NA	Name=TAL1_(SC-12984)	Name=5	NA	rs1129185	0.03	0.03	0.021	0.0213658	0.0487	NA	0.0504	0.0023	0.0204	0.05	NA	0.06	0.002	0.0452	0.063	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.691396	NA	NA	0.063372	0.014331	NA	0.022	NA	8.5093946
801	1	12919081	12919081	C	T	exonic	PRAMEF2	NA	nonsynonymous SNV	PRAMEF2:NM_023014:exon2:c.C217T:p.L73F	exonic	ENSG00000120952	NA	nonsynonymous SNV	ENSG00000120952:ENST00000240189:exon2:c.C217T:p.L73F	NA	NA	1p36.21	NA	NA	NA	NA	rs45443899	0.12	0.12	0.135	0.133586	0.1083	0.0159	0.1081	0.2821	0.0982	0.11	0.01	0.11	0.27	0.1069	0.27	0.09	T	0.991	D	0.861	P	0.780	N	1.000	P	1.195	L	2.33	T	-0.959	T	0.000	T	0.052	0.664	7.557	0.842	0.759	0.446	5.045	0.663873	NA	0.08	0.109055	0.242163	NA	0.094	NA	8.5090784
801	3	12856856	12856856	A	G	exonic	CAND2	NA	nonsynonymous SNV	CAND2:NM_012298:exon6:c.A944G:p.Q315R,CAND2:NM_001162499:exon8:c.A1223G:p.Q408R	exonic	ENSG00000144712	NA	nonsynonymous SNV	ENSG00000144712:ENST00000295989:exon6:c.A944G:p.Q315R,ENSG00000144712:ENST00000456430:exon8:c.A1223G:p.Q408R	Score=259;Name=lod=15	NA	3p25.2	NA	NA	NA	NA	rs2305398	0.59	0.59	0.645	0.576478	0.6551	0.2907	0.4986	0.972	0.3108	0.64	0.26	0.5	0.95	0.5526	0.95	0.82	T	0.0	B	0.0	B	0.027	N	0.000	P	-1.545	N	-0.13	T	-0.975	T	0.000	T	0.014	-1.214	0.066	3.85	1.046	0.601	7.173	-1.213618	NA	1	0.619223	0.9109	NA	0.667	NA	8.5064104
801	4	77033590	77033590	C	T	exonic	ART3	NA	nonsynonymous SNV	ART3:NM_001130017:exon10:c.C1022T:p.S341L,ART3:NM_001179:exon11:c.C1055T:p.S352L,ART3:NM_001130016:exon12:c.C1088T:p.S363L	exonic	ENSG00000156219	NA	nonsynonymous SNV	ENSG00000156219:ENST00000341029:exon10:c.C1022T:p.S341L,ENSG00000156219:ENST00000349321:exon11:c.C1055T:p.S352L,ENSG00000156219:ENST00000355810:exon12:c.C1088T:p.S363L	Score=304;Name=lod=23	NA	4q21.1	NA	NA	NA	NA	rs1128864	0.47	0.47	0.466	0.483826	0.2346	0.5982	0.4035	0.7035	0.3824	0.24	0.61	0.38	0.73	0.3516	0.73	0.19	T	0.025	B	0.006	B	0.521	N	1.000	P	0.35	N	2.98	T	-0.965	T	0.000	T	0.165	0.369	6.004	2.52	0.741	0.816	11.057	0.369077	NA	0.09	0.241163	0.629142	NA	0.384	NA	8.5059704
801	4	187209702	187209702	G	T	exonic	F11	NA	synonymous SNV	F11:NM_000128:exon15:c.G1812T:p.R604R	exonic	ENSG00000088926	NA	synonymous SNV	ENSG00000088926:ENST00000264692:exon15:c.G1656T:p.R552R,ENSG00000088926:ENST00000403665:exon15:c.G1812T:p.R604R	NA	NA	4q35.2	NA	NA	NA	NA	rs5971	0.09	0.09	0.094	0.0894569	0.0537	0.0843	0.0677	0.1445	0.0726	0.06	0.09	0.07	0.15	0.061	0.15	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.025	T	0.000	T	.	1.766	11.86	-2.53	-0.335	-1.510	3.347	1.765587	1.765587	NA	0.046279	0.123468	ID=COSM149775;OCCURENCE=1(stomach)	0.094	NA	8.5056876
802	4	44682465	44682465	T	C	exonic	GUF1	NA	nonsynonymous SNV	GUF1:NM_021927:exon2:c.T173C:p.L58P	exonic	ENSG00000151806	NA	nonsynonymous SNV	ENSG00000151806:ENST00000281543:exon2:c.T173C:p.L58P	NA	NA	4p12	Score=864;Name=V$OCT1_06	NA	NA	NA	rs6447368	0.46	0.46	0.43	0.440296	0.6014	0.4018	0.5202	0.2897	0.4611	0.59	0.4	0.52	0.29	0.5915	0.64	0.09	T	0.0	B	0.001	B	0.700	N	0.999	P	0	N	-0.45	T	-0.917	T	0.000	T	0.021	1.072	9.377	2.83	0.412	4.783	7.019	1.072042	NA	0.14	0.635814	0.345665	ID=COSM149668;OCCURENCE=1(stomach)	0.594	NA	8.5046194
802	2	100058870	100058870	C	T	exonic	REV1	NA	nonsynonymous SNV	REV1:NM_001037872:exon5:c.G412A:p.V138M,REV1:NM_016316:exon5:c.G412A:p.V138M	exonic	ENSG00000135945	NA	nonsynonymous SNV	ENSG00000135945:ENST00000258428:exon5:c.G412A:p.V138M,ENSG00000135945:ENST00000393445:exon5:c.G412A:p.V138M	NA	NA	2q11.2	NA	NA	NA	NA	rs3087403	0.24	0.24	0.226	0.225839	0.2833	0.0625	0.3415	0.2995	0.1534	0.28	0.05	0.34	0.31	0.2675	0.34	0.11	T	0.038	B	0.03	B	0.066	N	1.000	P	1.935	M	1.59	T	-0.996	T	0.000	T	0.057	1.908	12.34	1.76	0.052	1.136	6.628	1.908171	1.908171	0.1	0.278605	0.282796	NA	0.188	NA	8.5039284
802	19	35648365	35648365	T	G	exonic	FXYD5	NA	nonsynonymous SNV	FXYD5:NM_001164605:exon3:c.T103G:p.S35A,FXYD5:NM_014164:exon3:c.T103G:p.S35A,FXYD5:NM_144779:exon3:c.T103G:p.S35A	exonic	ENSG00000089327	NA	nonsynonymous SNV	ENSG00000089327:ENST00000342879:exon2:c.T103G:p.S35A,ENSG00000089327:ENST00000392218:exon3:c.T103G:p.S35A,ENSG00000089327:ENST00000392219:exon3:c.T103G:p.S35A,ENSG00000089327:ENST00000423817:exon3:c.T103G:p.S35A,ENSG00000089327:ENST00000541435:exon3:c.T103G:p.S35A,ENSG00000089327:ENST00000543307:exon3:c.T103G:p.S35A,ENSG00000089327:ENST00000588699:exon3:c.T103G:p.S35A,ENSG00000089327:ENST00000590686:exon3:c.T103G:p.S35A,ENSG00000089327:ENST00000592290:exon3:c.T103G:p.S35A	NA	NA	19q13.12	NA	NA	NA	NA	rs1688005	0.45	0.45	0.439	0.41234	0.2565	0.7976	0.3487	0.3359	0.3241	0.26	0.81	0.38	0.37	0.3215	0.81	0.44	T	0.0	B	0.001	B	0.007	N	1.000	P	0	N	0.86	T	-0.959	T	0.000	T	0.018	-0.919	0.4	-4.58	-0.698	-2.286	0.659	-0.91867	NA	0.7	0.251744	0.325465	NA	0.348	NA	8.5035894
802	12	49424534	49424534	G	A	exonic	MLL2	NA	synonymous SNV	MLL2:NM_003482:exon41:c.C13689T:p.P4563P	exonic	ENSG00000167548	NA	synonymous SNV	ENSG00000167548:ENST00000301067:exon41:c.C13689T:p.P4563P	Score=605;Name=lod=382	NA	12q13.12	Score=730;Name=V$NRSF_01	NA	NA	NA	rs11168830	0.12	0.12	0.087	0.122804	0.0358	0.256	0.2248	0.0492	0.1022	0.04	0.27	0.19	0.05	0.0946	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.313213	NA	NA	0.033027	0.049009	NA	0.029	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000080132.1;CLNDSDB=.;CLNDSDBID=.	8.5032396
802	19	53344051	53344051	T	C	exonic	ZNF468	NA	nonsynonymous SNV	ZNF468:NM_001008801:exon4:c.A1496G:p.E499G	exonic	ENSG00000204604	NA	nonsynonymous SNV	ENSG00000204604:ENST00000390651:exon4:c.A1337G:p.E446G,ENSG00000204604:ENST00000595646:exon4:c.A1496G:p.E499G,ENSG00000204604:ENST00000396409:exon5:c.A1337G:p.E446G	NA	NA	19q13.41	NA	NA	NA	NA	rs75548544	0.09	0.09	0.075	0.0970447	0.1163	0.0496	0.1124	0.0998	0.1115	0.11	0.05	0.1	0.08	0.1068	0.11	0	D	0.89	P	0.233	B	.	.	1.000	P	1.66	L	1.29	T	-1.092	T	0.002	T	0.101	1.06	9.327	-0.842	-0.506	0.466	4.076	1.059528	NA	0	0.107209	0.095098	NA	0.138	NA	8.5030244
802	12	122812503	122812503	G	C	exonic	CLIP1	NA	nonsynonymous SNV	CLIP1:NM_198240:exon15:c.C3102G:p.D1034E,CLIP1:NM_002956:exon16:c.C3207G:p.D1069E,CLIP1:NM_001247997:exon17:c.C3240G:p.D1080E	exonic	ENSG00000130779	NA	nonsynonymous SNV	ENSG00000130779:ENST00000545889:exon12:c.C1965G:p.D655E,ENSG00000130779:ENST00000302528:exon15:c.C3207G:p.D1069E,ENSG00000130779:ENST00000361654:exon15:c.C2874G:p.D958E,ENSG00000130779:ENST00000537178:exon15:c.C3102G:p.D1034E,ENSG00000130779:ENST00000358808:exon16:c.C3207G:p.D1069E,ENSG00000130779:ENST00000540338:exon16:c.C3240G:p.D1080E	Score=387;Name=lod=50	NA	12q24.31	Score=787;Name=V$PPARG_03	NA	Name=20	NA	rs1129167	0.41	0.41	0.42	0.40655	0.6412	0.3889	0.5159	0.0575	0.5777	0.64	0.36	0.48	0.08	0.5625	0.64	1	T	0.0	B	0.001	B	0.000	N	0.000	P	0	N	1.26	T	-0.930	T	0.000	T	0.061	-1.209	0.068	0.728	0.062	0.280	1.701	-1.209154	NA	0.72	0.626744	0.159101	NA	0.42	NA	8.5028894
802	1	43917637	43917637	G	A	exonic	HYI	NA	synonymous SNV	HYI:NM_001190880:exon4:c.C474T:p.D158D,HYI:NM_031207:exon4:c.C474T:p.D158D,HYI:NM_001243526:exon5:c.C549T:p.D183D	exonic	ENSG00000178922	NA	synonymous SNV	ENSG00000178922:ENST00000372425:exon4:c.C474T:p.D158D,ENSG00000178922:ENST00000372426:exon4:c.C330T:p.D110D,ENSG00000178922:ENST00000372432:exon4:c.C474T:p.D158D,ENSG00000178922:ENST00000486909:exon4:c.C474T:p.D158D,ENSG00000178922:ENST00000583037:exon4:c.C255T:p.D85D,ENSG00000178922:ENST00000372434:exon5:c.C549T:p.D183D	Score=545;Name=lod=218	NA	1p34.2	Score=793;Name=V$GFI1_01	NA	NA	NA	rs2251802	0.28	0.28	0.256	0.223043	0.4215	0.0784	0.389	0.1884	0.0971	0.42	0.08	0.42	0.21	0.3291	0.42	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.923	T	0.000	T	.	1.106	9.51	2.46	0.334	0.684	4.510	1.105568	NA	0.23	0.413953	0.233318	NA	0.362	NA	8.5021136
802	1	156263940	156263940	T	C	exonic	C1orf85	NA	nonsynonymous SNV	C1orf85:NM_001256605:exon3:c.A409G:p.I137V,C1orf85:NM_001256604:exon4:c.A667G:p.I223V,C1orf85:NM_001256608:exon4:c.A667G:p.I223V,C1orf85:NM_001256609:exon4:c.A424G:p.I142V,C1orf85:NM_144580:exon4:c.A667G:p.I223V	exonic	ENSG00000198715	NA	nonsynonymous SNV	ENSG00000198715:ENST00000368264:exon3:c.A409G:p.I137V,ENSG00000198715:ENST00000362007:exon4:c.A667G:p.I223V	NA	NA	1q22	Score=809;Name=V$SRF_Q6	NA	NA	NA	rs10908495	0.21	0.21	0.195	0.20647	0.2694	0.2272	0.2795	0.0923	0.2229	0.27	0.24	0.23	0.09	0.2688	0.29	0.56	T	0.0	B	0.0	B	0.264	N	1.000	P	-1.78	N	2.06	T	-0.913	T	0.004	T	0.03	-0.79	0.703	2.5	0.301	-0.073	6.184	-0.790072	NA	0.89	0.293256	0.123468	NA	0.217	NA	8.5018774
802	19	55667647	55667647	C	A	exonic	TNNI3	NA	unknown	UNKNOWN	exonic	ENSG00000129991	NA	nonsynonymous SNV	ENSG00000129991:ENST00000586858:exon2:c.G167T:p.G56V	Score=401;Name=lod=57	NA	19q13.42	NA	Name=ZBTB7A_(SC-34508)	NA	NA	rs3729711	0.03	0.03	0.029	0.0227636	0.0696	0.001	0.0274	0.0023	0.0215	0.08	NA	0.03	NA	0.0461	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.963117	1.963117	NA	0.05049	0.006879	NA	0.065	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000036274.1;CLNDSDB=.;CLNDSDBID=.	8.5004767
802	2	26683777	26683777	G	A	exonic	OTOF	NA	synonymous SNV	OTOF:NM_194322:exon26:c.C3585T:p.R1195R,OTOF:NM_004802:exon27:c.C3354T:p.R1118R,OTOF:NM_194323:exon27:c.C3354T:p.R1118R,OTOF:NM_194248:exon44:c.C5655T:p.R1885R	exonic	ENSG00000115155	NA	synonymous SNV	ENSG00000115155:ENST00000402415:exon26:c.C3585T:p.R1195R,ENSG00000115155:ENST00000338581:exon27:c.C3354T:p.R1118R,ENSG00000115155:ENST00000339598:exon27:c.C3354T:p.R1118R,ENSG00000115155:ENST00000272371:exon44:c.C5655T:p.R1885R,ENSG00000115155:ENST00000403946:exon44:c.C5655T:p.R1885R	Score=654;Name=lod=608	NA	2p23.3	Score=824;Name=V$ARP1_01	NA	NA	NA	rs45442103	0.03	0.03	0.025	0.023762	0.0596	NA	0.0533	0.0023	0.0194	0.06	NA	0.07	0.0041	0.0447	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.29141	1.29141	NA	0.062209	0.01044	NA	0.014	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=Deafness\x2c_autosomal_recessive_9|not_specified;CLNREVSTAT=single|single;CLNACC=RCV000021070.1|RCV000041579.1;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet|.;CLNDSDBID=NBK1251:C1832828:601071:ORPHA90636|.	8.5001576
802	3	184700426	184700426	C	T	exonic	VPS8	NA	nonsynonymous SNV	VPS8:NM_001009921:exon40:c.C3493T:p.H1165Y,VPS8:NM_015303:exon40:c.C3487T:p.H1163Y	exonic	ENSG00000156931	NA	nonsynonymous SNV	ENSG00000156931:ENST00000446204:exon38:c.C3217T:p.H1073Y,ENSG00000156931:ENST00000287546:exon40:c.C3493T:p.H1165Y,ENSG00000156931:ENST00000436792:exon40:c.C3487T:p.H1163Y,ENSG00000156931:ENST00000437079:exon41:c.C3493T:p.H1165Y	NA	NA	3q27.2	NA	NA	NA	NA	rs11555405	0.3	0.3	0.261	0.285942	0.2883	0.506	0.3285	0.0174	0.3896	0.3	0.51	0.35	0.02	0.2934	0.51	1	T	0.007	B	0.014	B	0.014	N	1.000	P	0.145	N	2.29	T	-0.951	T	0.000	T	0.067	0.026	4.147	5.09	1.408	0.339	9.218	0.025712	NA	0.19	0.252425	0.048652	NA	0.341	NA	8.4992084
802	12	51737562	51737562	T	C	exonic	CELA1	NA	nonsynonymous SNV	CELA1:NM_001971:exon3:c.A175G:p.M59V	exonic	ENSG00000139610	NA	nonsynonymous SNV	ENSG00000139610:ENST00000293636:exon3:c.A175G:p.M59V	Score=531;Name=lod=191	NA	12q13.13	NA	NA	NA	NA	rs17860300	0.15	0.15	0.138	0.14377	0.2873	0.0417	0.1772	0.0809	0.1626	0.26	0.03	0.19	0.09	0.2376	0.31	0.55	T	0.011	B	0.024	B	0.001	N	0.028	P	-0.76	N	-2.94	D	-1.043	T	0.000	T	0.247	2.022	12.72	-0.799	0.013	-0.007	3.405	2.021611	2.021611	0.18	0.31	0.118929	NA	0.254	NA	8.4984334
802	22	40417820	40417820	A	G	exonic	FAM83F	NA	nonsynonymous SNV	FAM83F:NM_138435:exon4:c.A1306G:p.R436G	exonic	ENSG00000133477	NA	nonsynonymous SNV	ENSG00000133477:ENST00000333407:exon4:c.A1306G:p.R436G	NA	NA	22q13.1	NA	NA	NA	NA	rs5995794	0.23	0.23	0.222	0.271166	0.2863	0.0863	0.1585	0.3359	0.4387	0.3	0.08	0.17	0.34	0.2698	0.34	0.14	T	0.067	B	0.025	B	0.326	N	1.000	P	0.895	L	2.91	T	-0.922	T	0.000	T	0.064	0.612	7.297	2.72	0.478	3.639	8.847	0.612217	NA	0.01	0.279614	0.271136	ID=COSM445024;OCCURENCE=1(breast)	0.246	NA	8.4976194
802	6	29911124	29911124	C	T	exonic	HLA-A	NA	synonymous SNV	HLA-A:NM_001242758:exon3:c.C423T:p.A141A,HLA-A:NM_002116:exon3:c.C423T:p.A141A	exonic	ENSG00000206503	NA	synonymous SNV	ENSG00000206503:ENST00000376802:exon3:c.C423T:p.A141A,ENSG00000206503:ENST00000376806:exon3:c.C423T:p.A141A,ENSG00000206503:ENST00000376809:exon3:c.C423T:p.A141A,ENSG00000206503:ENST00000396634:exon5:c.C423T:p.A141A	Score=336;Name=lod=31	NA	6p22.1	NA	Name=Pol2-4H8	Name=10	NA	rs3173418	0.06	0.06	0.07	0.0587061	0.0477	0.0397	0.0259	0.1021	0.0542	0.04	0.04	0.03	0.11	0.0628	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.095557	NA	NA	0.059335	0.090879	NA	0.029	NA	8.4968316
802	1	35250720	35250720	C	T	exonic	GJB3	NA	synonymous SNV	GJB3:NM_001005752:exon2:c.C357T:p.N119N,GJB3:NM_024009:exon2:c.C357T:p.N119N	exonic	ENSG00000188910	NA	synonymous SNV	ENSG00000188910:ENST00000373362:exon2:c.C357T:p.N119N,ENSG00000188910:ENST00000373366:exon2:c.C357T:p.N119N	NA	NA	1p34.3	NA	Name=E2F6	Name=6	NA	rs41310442	0.07	0.07	0.069	0.0976438	0.0457	0.122	0.0331	0.1051	0.1616	0.04	0.1	0.03	0.1	0.0749	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.871369	NA	NA	0.050233	0.099637	NA	0.058	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000039321.1;CLNDSDB=.;CLNDSDBID=.	8.4958336
802	6	75848181	75848181	A	G	exonic	COL12A1	NA	nonsynonymous SNV	COL12A1:NM_080645:exon14:c.T1721C:p.I574T,COL12A1:NM_004370:exon29:c.T5213C:p.I1738T	exonic	ENSG00000111799	NA	nonsynonymous SNV	ENSG00000111799:ENST00000345356:exon14:c.T1721C:p.I574T,ENSG00000111799:ENST00000416123:exon28:c.T5213C:p.I1738T,ENSG00000111799:ENST00000322507:exon29:c.T5213C:p.I1738T,ENSG00000111799:ENST00000483888:exon29:c.T5213C:p.I1738T	NA	NA	6q13	NA	NA	NA	NA	rs240736	0.26	0.26	0.253	0.264976	0.2883	0.1548	0.2911	0.3487	0.2229	0.27	0.15	0.28	0.34	0.2647	0.34	0.61	T	0.0	B	0.001	B	0.404	N	1.000	P	-0.075	N	-2.11	D	-0.947	T	0.128	T	0.127	0.382	6.073	-11.6	-2.627	0.400	11.451	0.381789	NA	NA	0.284614	0.307994	NA	0.297	NA	8.4957194
802	8	95680229	95680229	C	T	exonic	ESRP1	NA	synonymous SNV	ESRP1:NM_001034915:exon10:c.C984T:p.V328V,ESRP1:NM_001122825:exon10:c.C984T:p.V328V,ESRP1:NM_001122826:exon10:c.C984T:p.V328V,ESRP1:NM_001122827:exon10:c.C984T:p.V328V,ESRP1:NM_017697:exon10:c.C984T:p.V328V	exonic	ENSG00000104413	NA	synonymous SNV	ENSG00000104413:ENST00000517610:exon7:c.C561T:p.V187V,ENSG00000104413:ENST00000358397:exon10:c.C984T:p.V328V,ENSG00000104413:ENST00000423620:exon10:c.C984T:p.V328V,ENSG00000104413:ENST00000433389:exon10:c.C984T:p.V328V,ENSG00000104413:ENST00000454170:exon10:c.C984T:p.V328V	Score=600;Name=lod=366	NA	8q22.1	Score=800;Name=V$PAX4_01	Name=CTCF	NA	NA	rs1549466	0.36	0.36	0.321	0.352436	0.3897	0.5387	0.3804	0.0514	0.5092	0.41	0.54	0.37	0.06	0.4026	0.54	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.909	T	0.000	T	.	1.131	9.611	-0.637	-0.440	-0.523	9.871	1.131193	NA	NA	0.378817	0.105249	NA	0.333	NA	8.4955496
803	19	8160334	8160334	G	A	exonic	FBN3	NA	nonsynonymous SNV	FBN3:NM_032447:exon45:c.C5710T:p.L1904F	exonic	ENSG00000142449	NA	nonsynonymous SNV	ENSG00000142449:ENST00000270509:exon45:c.C5710T:p.L1904F,ENSG00000142449:ENST00000600128:exon46:c.C5710T:p.L1904F,ENSG00000142449:ENST00000601739:exon46:c.C5710T:p.L1904F	Score=508;Name=lod=155	NA	19p13.2	NA	NA	NA	NA	rs12608849	0.29	0.29	0.267	0.309505	0.2843	0.4881	0.2767	0.0613	0.5102	0.28	0.48	0.29	0.07	0.302	0.48	0.32	T	0.059	B	0.045	B	0.000	U	0.906	P	0.76	N	-2.3	D	-0.988	T	0.000	T	0.041	-0.498	1.717	-0.659	0.053	0.137	3.957	-0.49754	NA	0.86	0.252674	0.093736	NA	0.312	NA	8.4943594
803	4	185310218	185310218	C	T	exonic	IRF2	NA	synonymous SNV	IRF2:NM_002199:exon9:c.G744A:p.G248G	exonic	ENSG00000168310	NA	synonymous SNV	ENSG00000168310:ENST00000502750:exon4:c.G315A:p.G105G,ENSG00000168310:ENST00000393593:exon9:c.G744A:p.G248G	Score=534;Name=lod=197	NA	4q35.1	NA	NA	NA	NA	rs1131553	0.4	0.4	0.376	0.423123	0.3598	0.4216	0.5245	0.3548	0.5102	0.37	0.37	0.53	0.37	0.422	0.53	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.906	T	0.000	T	.	0.127	4.681	-4.03	-0.699	-1.266	1.133	0.126624	NA	NA	0.392558	0.346119	ID=COSM149769;OCCURENCE=1(stomach)	0.442	NA	8.4923086
803	1	158988270	158988270	T	C	exonic	IFI16	NA	synonymous SNV	IFI16:NM_001206567:exon4:c.T633C:p.Y211Y,IFI16:NM_005531:exon5:c.T801C:p.Y267Y	exonic	ENSG00000163565	NA	synonymous SNV	ENSG00000163565:ENST00000474473:exon3:c.T327C:p.Y109Y,ENSG00000163565:ENST00000359709:exon4:c.T633C:p.Y211Y,ENSG00000163565:ENST00000430894:exon4:c.T645C:p.Y215Y,ENSG00000163565:ENST00000448393:exon4:c.T801C:p.Y267Y,ENSG00000163565:ENST00000295809:exon5:c.T801C:p.Y267Y,ENSG00000163565:ENST00000340979:exon5:c.T801C:p.Y267Y,ENSG00000163565:ENST00000368131:exon5:c.T801C:p.Y267Y,ENSG00000163565:ENST00000368132:exon5:c.T801C:p.Y267Y	NA	NA	1q23.1	NA	NA	NA	NA	rs11539423	0.04	0.04	0.023	0.028754	0.0636	NA	0.0591	0.0174	0.0164	0.06	NA	0.07	0.03	0.0478	0.07	.	.	.	.	.	.	.	.	1.000	N	.	.	.	.	-0.980	T	0.018	T	.	-0.413	2.073	-5.25	-0.631	-1.264	4.367	-0.412503	NA	NA	0.063488	0.021562	NA	0.145	NA	8.4917786
803	3	108147728	108147728	T	C	exonic	MYH15	NA	nonsynonymous SNV	MYH15:NM_014981:exon28:c.A3373G:p.T1125A	exonic	ENSG00000144821	NA	nonsynonymous SNV	ENSG00000144821:ENST00000273353:exon28:c.A3373G:p.T1125A	Score=484;Name=lod=124	NA	3q13.13	NA	NA	NA	NA	rs3900940	0.18	0.18	0.161	0.16893	0.3131	0.0119	0.2032	0.1241	0.2188	0.33	NA	0.26	0.13	0.2405	0.33	1	T	0.001	B	0.009	B	.	.	0.342	P	-1.11	N	-0.89	T	-1.055	T	0.000	T	0.008	-1.409	0.022	-1.67	-0.097	1.227	5.557	-1.409432	NA	1	0.288306	0.142237	NA	0.152	NA	8.4914274
803	18	52895531	52895531	T	C	exonic	TCF4	NA	synonymous SNV	TCF4:NM_001243234:exon12:c.A1461G:p.S487S,TCF4:NM_001243235:exon12:c.A1449G:p.S483S,TCF4:NM_001243236:exon12:c.A1449G:p.S483S,TCF4:NM_001243232:exon15:c.A1728G:p.S576S,TCF4:NM_001243233:exon15:c.A1539G:p.S513S,TCF4:NM_001243231:exon17:c.A1803G:p.S601S,TCF4:NM_001243227:exon18:c.A1869G:p.S623S,TCF4:NM_001243230:exon18:c.A1920G:p.S640S,TCF4:NM_001083962:exon19:c.A1941G:p.S647S,TCF4:NM_001243228:exon19:c.A1959G:p.S653S,TCF4:NM_003199:exon19:c.A1929G:p.S643S,TCF4:NM_001243226:exon20:c.A2247G:p.S749S	exonic	ENSG00000196628	NA	synonymous SNV	ENSG00000196628:ENST00000457482:exon12:c.A1461G:p.S487S,ENSG00000196628:ENST00000561831:exon12:c.A1449G:p.S483S,ENSG00000196628:ENST00000570287:exon12:c.A1449G:p.S483S,ENSG00000196628:ENST00000537856:exon14:c.A1539G:p.S513S,ENSG00000196628:ENST00000570177:exon14:c.A1539G:p.S513S,ENSG00000196628:ENST00000544241:exon15:c.A1728G:p.S576S,ENSG00000196628:ENST00000561992:exon15:c.A1539G:p.S513S,ENSG00000196628:ENST00000564228:exon15:c.A1716G:p.S572S,ENSG00000196628:ENST00000567880:exon16:c.A1749G:p.S583S,ENSG00000196628:ENST00000543082:exon17:c.A1803G:p.S601S,ENSG00000196628:ENST00000566279:exon17:c.A1761G:p.S587S,ENSG00000196628:ENST00000537578:exon18:c.A1869G:p.S623S,ENSG00000196628:ENST00000540999:exon18:c.A1857G:p.S619S,ENSG00000196628:ENST00000566286:exon18:c.A1920G:p.S640S,ENSG00000196628:ENST00000568673:exon18:c.A1869G:p.S623S,ENSG00000196628:ENST00000568740:exon18:c.A1854G:p.S618S,ENSG00000196628:ENST00000354452:exon19:c.A1941G:p.S647S,ENSG00000196628:ENST00000356073:exon19:c.A1929G:p.S643S,ENSG00000196628:ENST00000564403:exon19:c.A1959G:p.S653S,ENSG00000196628:ENST00000564999:exon19:c.A1929G:p.S643S,ENSG00000196628:ENST00000565018:exon19:c.A1941G:p.S647S,ENSG00000196628:ENST00000398339:exon20:c.A2247G:p.S749S	NA	NA	18q21.2	Score=735;Name=V$PAX4_04	Name=CTCF	Name=67	NA	rs8766	0.38	0.38	0.368	0.342452	0.4155	0.4008	0.366	0.2965	0.2526	0.39	0.43	0.38	0.29	0.3714	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.740505	NA	NA	0.388605	0.317975	NA	0.413	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000079460.1|RCV000128388.1;CLNDSDB=.|.;CLNDSDBID=.|.	8.4911616
803	1	55524197	55524197	A	G	exonic	PCSK9	NA	synonymous SNV	PCSK9:NM_174936:exon9:c.A1380G:p.V460V	exonic	ENSG00000169174	NA	nonsynonymous SNV	ENSG00000169174:ENST00000543384:exon7:c.A728G:p.Y243C	Score=387;Name=lod=50	NA	1p32.3	NA	NA	NA	NA	rs540796	0.86	0.86	0.851	0.869209	0.8211	0.9881	0.8948	0.7746	0.9059	0.82	0.98	0.88	0.79	0.8544	0.98	0.16	T	.	.	.	.	.	.	0.000	P	.	.	-1.5	D	-1.013	T	0.000	T	.	-0.265	2.729	4.47	0.861	1.258	7.514	-0.264858	NA	NA	0.833488	0.787108	NA	0.855	NA	8.491012
803	2	116510817	116510817	G	C	exonic	DPP10	NA	nonsynonymous SNV	DPP10:NM_001004360:exon11:c.G997C:p.A333P,DPP10:NM_001178034:exon11:c.G1030C:p.A344P,DPP10:NM_001178037:exon11:c.G1006C:p.A336P,DPP10:NM_020868:exon11:c.G1018C:p.A340P,DPP10:NM_001178036:exon12:c.G868C:p.A290P	exonic	ENSG00000175497	NA	nonsynonymous SNV	ENSG00000175497:ENST00000310323:exon11:c.G997C:p.A333P,ENSG00000175497:ENST00000393147:exon11:c.G1030C:p.A344P,ENSG00000175497:ENST00000410059:exon11:c.G1018C:p.A340P,ENSG00000175497:ENST00000409163:exon12:c.G868C:p.A290P	Score=519;Name=lod=172	NA	2q14.1	NA	NA	NA	NA	rs2053724	0.57	0.57	0.515	0.529353	0.6252	0.7321	0.732	0.1589	0.5787	0.63	0.75	0.7	0.19	0.6108	0.75	0.46	T	0.027	B	0.005	B	0.002	N	1.000	P	1.35	L	1.6	T	-1.037	T	0.000	T	0.063	1.237	10.02	3.2	0.734	1.938	17.145	1.237402	1.237402	0.27	0.606512	0.22719	ID=COSM441031,COSM441030;OCCURENCE=1(breast)	0.493	NA	8.4908214
803	4	52938243	52938243	T	C	exonic	SPATA18	NA	nonsynonymous SNV	SPATA18:NM_145263:exon6:c.T679C:p.S227P	exonic	ENSG00000163071	NA	nonsynonymous SNV	ENSG00000163071:ENST00000419395:exon5:c.T583C:p.S195P,ENSG00000163071:ENST00000295213:exon6:c.T679C:p.S227P,ENSG00000163071:ENST00000505320:exon6:c.T679C:p.S227P	NA	NA	4q12	Score=736;Name=V$MEF2_04	NA	Name=8	NA	rs3860707	0.46	0.46	0.373	0.383387	0.6441	0.3968	0.6182	0.084	0.3395	0.66	0.39	0.68	0.08	0.5554	0.68	0.29	T	0.378	B	0.192	B	0.058	N	1.000	P	1.61	L	1.5	T	-1.012	T	0.000	T	0.291	1.999	12.64	-3.84	-0.593	0.287	16.528	1.999411	1.999411	0.19	0.643256	0.171584	NA	0.348	NA	8.4905774
803	17	64210757	64210757	C	A	exonic	APOH	NA	nonsynonymous SNV	APOH:NM_000042:exon7:c.G796T:p.V266L	exonic	ENSG00000091583	NA	nonsynonymous SNV	ENSG00000091583:ENST00000205948:exon7:c.G796T:p.V266L	NA	NA	17q24.2	NA	NA	NA	NA	rs4581	0.47	0.47	0.472	0.541534	0.2316	0.754	0.5403	0.5469	0.635	0.22	0.76	0.46	0.54	0.3738	0.76	0.78	T	0.0	B	0.001	B	0.016	N	1.000	P	-0.2	N	1.65	T	-0.992	T	0.000	T	0.033	0.319	5.73	-4.53	-0.422	-0.386	2.367	0.319109	NA	0.88	0.237558	0.509532	NA	0.457	CLINSIG=non-pathogenic;CLNDBN=APOH_POLYMORPHISM;CLNREVSTAT=single;CLNACC=RCV000017417.1;CLNDSDB=.;CLNDSDBID=.	8.4903754
803	16	23711925	23711925	C	G	exonic	ERN2	NA	nonsynonymous SNV	ERN2:NM_033266:exon13:c.G1604C:p.S535T	exonic	ENSG00000134398	NA	nonsynonymous SNV	ENSG00000134398:ENST00000457008:exon12:c.G1304C:p.S435T,ENSG00000134398:ENST00000256797:exon13:c.G1604C:p.S535T	NA	NA	16p12.2	NA	NA	Name=9	NA	rs26764	0.41	0.41	0.405	0.434704	0.2734	0.4792	0.3228	0.674	0.3108	0.28	0.46	0.3	0.64	0.3144	0.64	0.68	T	0.0	B	0.0	B	0.877	N	1.000	P	-0.345	N	0.26	T	-0.922	T	0.000	T	0.033	-0.769	0.763	2.02	0.255	0.105	6.493	-0.768622	NA	0.45	0.255465	0.594447	NA	0.428	NA	8.4900684
804	2	176987456	176987456	C	A	UTR5	HOXD9	NM_014213:c.-41C>A	NA	NA	ncRNA_UTR5	ENSG00000128709	NA	NA	NA	Score=762;Name=lod=1665	NA	2q31.1	Score=792;Name=V$PAX5_01	Name=Max,USF-1,USF2,Pol2,ATF3,YY1_(C-20),USF1_(SC-8983)	Name=52	NA	rs144600979	0.0018	0.0018	NA	0.00359425	0.007	NA	0.0101	NA	0.0041	0.0013	NA	0.01	NA	0.008	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.455598	1.455598	NA	NA	NA	NA	NA	NA	8.485
804	22	33670584	33670584	G	A	exonic	LARGE	NA	synonymous SNV	LARGE:NM_133642:exon15:c.C2100T:p.N700N,LARGE:NM_004737:exon16:c.C2100T:p.N700N	exonic	ENSG00000133424	NA	synonymous SNV	ENSG00000133424:ENST00000452586:exon11:c.C1497T:p.N499N,ENSG00000133424:ENST00000402320:exon14:c.C1944T:p.N648N,ENSG00000133424:ENST00000437602:exon14:c.C1953T:p.N651N,ENSG00000133424:ENST00000337431:exon15:c.C1944T:p.N648N,ENSG00000133424:ENST00000397394:exon15:c.C2100T:p.N700N,ENSG00000133424:ENST00000354992:exon16:c.C2100T:p.N700N	Score=731;Name=lod=1242	NA	22q12.3	NA	Name=CTCF	NA	NA	rs17722172	0.03	0.03	0.037	0.0209665	0.0656	0.001	0.0403	0.0038	0.0051	0.06	NA	0.04	0.01	0.0472	0.071	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.607901	NA	NA	0.071395	0.01498	NA	0.022	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000081178.1|RCV000126576.1;CLNDSDB=.|.;CLNDSDBID=.|.	8.4824716
804	3	183818416	183818416	G	A	exonic	HTR3E	NA	nonsynonymous SNV	HTR3E:NM_001256614:exon1:c.G256A:p.A86T,HTR3E:NM_182589:exon1:c.G256A:p.A86T,HTR3E:NM_198314:exon1:c.G256A:p.A86T,HTR3E:NM_001256613:exon2:c.G211A:p.A71T,HTR3E:NM_198313:exon2:c.G211A:p.A71T	exonic	ENSG00000186038	NA	nonsynonymous SNV	ENSG00000186038:ENST00000335304:exon1:c.G256A:p.A86T,ENSG00000186038:ENST00000436361:exon1:c.G256A:p.A86T,ENSG00000186038:ENST00000440596:exon1:c.G256A:p.A86T,ENSG00000186038:ENST00000415389:exon2:c.G211A:p.A71T,ENSG00000186038:ENST00000425359:exon2:c.G211A:p.A71T	Score=458;Name=lod=97	NA	3q27.1	NA	NA	NA	NA	rs7627615	0.75	0.75	0.762	0.734225	0.6233	0.7679	0.683	0.9251	0.592	0.62	0.78	0.72	0.92	0.6407	0.92	1	T	0.001	B	0.001	B	0.000	N	1.000	P	-1.95	N	-0.95	T	-0.956	T	0.000	T	0.053	-0.423	2.027	2.64	0.176	3.012	6.686	-0.423357	NA	1	0.58814	0.870858	NA	0.804	NA	8.4811934
804	7	154738409	154738409	T	C	exonic	PAXIP1	NA	nonsynonymous SNV	PAXIP1:NM_007349:exon18:c.A3037G:p.M1013V	exonic	ENSG00000157212	NA	nonsynonymous SNV	ENSG00000157212:ENST00000397192:exon18:c.A3037G:p.M1013V,ENSG00000157212:ENST00000404141:exon18:c.A3037G:p.M1013V	Score=554;Name=lod=237	NA	7q36.2	NA	NA	NA	NA	rs3501	0.23	0.23	0.205	0.235423	0.3012	0.2083	0.3818	0.0726	0.3119	0.29	0.21	0.36	0.08	0.2813	0.36	0.58	T	0.0	B	0.001	B	0.001	N	0.024	P	1.1	L	0.99	T	-0.929	T	0.000	T	0.056	1.897	12.3	0.184	-0.203	1.156	5.536	1.897499	1.897499	0.38	0.269645	0.097409	ID=COSM150431,COSM1449566;OCCURENCE=1(stomach),1(large_intestine)	0.225	NA	8.4811884
804	9	33135238	33135238	G	A	exonic	B4GALT1	NA	synonymous SNV	B4GALT1:NM_001497:exon2:c.C597T:p.H199H	exonic	ENSG00000086062	NA	synonymous SNV	ENSG00000086062:ENST00000379731:exon2:c.C597T:p.H199H,ENSG00000086062:ENST00000535206:exon2:c.C597T:p.H199H	Score=604;Name=lod=379	NA	9p21.1	Score=827;Name=V$OCT_C	NA	NA	NA	rs1065765	0.06	0.06	0.059	0.0473243	0.0626	0.0585	0.0331	0.0492	0.0276	0.06	0.07	0.03	0.05	0.0578	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.451378	NA	NA	0.066163	0.037903	NA	0.036	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000079717.1;CLNDSDB=.;CLNDSDBID=.	8.4801036
804	16	71710428	71710428	G	A	exonic	PHLPP2	NA	synonymous SNV	PHLPP2:NM_015020:exon8:c.C1393T:p.L465L	exonic	ENSG00000040199	NA	synonymous SNV	ENSG00000040199:ENST00000568004:exon4:c.C607T:p.L203L,ENSG00000040199:ENST00000356272:exon8:c.C1393T:p.L465L,ENSG00000040199:ENST00000360429:exon8:c.C1393T:p.L465L,ENSG00000040199:ENST00000393524:exon8:c.C1393T:p.L465L,ENSG00000040199:ENST00000567016:exon9:c.C1498T:p.L500L,ENSG00000040199:ENST00000568954:exon9:c.C1393T:p.L465L	Score=633;Name=lod=497	NA	16q22.2	Score=903;Name=V$E47_02	NA	Name=7	NA	rs61733123	0.05	0.05	0.038	0.0423323	0.0636	0.0456	0.0303	0.0023	0.0798	0.07	0.06	0.04	0.0041	0.0578	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.145297	NA	NA	0.065349	0.010009	NA	0.029	NA	8.4799176
804	10	101451259	101451259	T	C	exonic	ENTPD7	NA	nonsynonymous SNV	ENTPD7:NM_020354:exon8:c.T827C:p.V276A	exonic	ENSG00000198018	NA	nonsynonymous SNV	ENSG00000198018:ENST00000370489:exon8:c.T827C:p.V276A	Score=616;Name=lod=427	NA	10q24.2	NA	NA	Name=4	NA	rs11190245	0.26	0.26	0.24	0.230631	0.3022	0.2956	0.2118	0.1785	0.1738	0.31	0.28	0.22	0.19	0.256	0.31	0.83	T	0.002	B	0.003	B	0.031	N	1.000	P	-0.205	N	2.79	T	-0.968	T	0.000	T	0.012	1.233	10	-1.58	-0.462	0.223	0.826	1.233309	1.233309	0.3	0.295349	0.190649	NA	0.188	NA	8.4797844
804	2	73492614	73492614	A	T	exonic	FBXO41	NA	nonsynonymous SNV	FBXO41:NM_001080410:exon4:c.T1360A:p.S454T	exonic	ENSG00000163013	NA	nonsynonymous SNV	ENSG00000163013:ENST00000295133:exon5:c.T1543A:p.S515T,ENSG00000163013:ENST00000520530:exon5:c.T1360A:p.S454T,ENSG00000163013:ENST00000521871:exon5:c.T1360A:p.S454T	Score=407;Name=lod=60	NA	2p13.2	Score=929;Name=V$IK2_01	NA	NA	NA	rs526106	0.33	0.33	0.316	0.330272	0.2674	0.4752	0.2421	0.2837	0.3712	0.27	0.48	0.28	0.28	0.3283	0.48	0.85	T	.	.	.	.	0.261	N	0.998	P	0.345	N	.	.	-0.939	T	0.000	T	0.042	2.199	13.31	-0.818	-0.113	0.752	0.848	2.199095	2.199095	0.35	0.25948	0.271561	NA	0.275	NA	8.4781534
804	19	51323232	51323232	T	C	exonic	KLK1	NA	nonsynonymous SNV	KLK1:NM_002257:exon4:c.A556G:p.K186E	exonic	ENSG00000167748	NA	nonsynonymous SNV	ENSG00000167748:ENST00000301420:exon4:c.A556G:p.K186E,ENSG00000167748:ENST00000448701:exon5:c.A250G:p.K84E	NA	NA	19q13.33	NA	NA	NA	NA	rs5517	0.36	0.36	0.303	0.339457	0.2674	0.5972	0.4568	0.1815	0.2781	0.28	0.59	0.42	0.19	0.3197	0.59	1	T	0.011	B	0.025	B	.	.	1.000	P	0.29	N	-2.41	D	-1.010	T	0.000	T	0.155	-1.248	0.052	-0.553	-0.281	-1.665	6.404	-1.247545	NA	0.7	0.268605	0.196323	NA	0.399	NA	8.4776284
804	1	31426815	31426815	A	G	exonic	PUM1	NA	synonymous SNV	PUM1:NM_001020658:exon15:c.T2337C:p.N779N,PUM1:NM_014676:exon15:c.T2337C:p.N779N	exonic	ENSG00000134644	NA	synonymous SNV	ENSG00000134644:ENST00000424085:exon11:c.T1611C:p.N537N,ENSG00000134644:ENST00000423018:exon12:c.T1905C:p.N635N,ENSG00000134644:ENST00000373742:exon13:c.T2160C:p.N720N,ENSG00000134644:ENST00000257075:exon15:c.T2337C:p.N779N,ENSG00000134644:ENST00000373741:exon15:c.T2445C:p.N815N,ENSG00000134644:ENST00000373747:exon15:c.T2340C:p.N780N,ENSG00000134644:ENST00000426105:exon15:c.T2337C:p.N779N,ENSG00000134644:ENST00000440538:exon15:c.T2259C:p.N753N	Score=597;Name=lod=357	NA	1p35.2	NA	NA	NA	NA	rs2275741	0.36	0.36	0.319	0.357428	0.3767	0.3462	0.4726	0.2859	0.364	0.38	0.34	0.45	0.29	0.4136	0.45	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.046	T	0.000	T	.	0.842	8.399	-4.63	-1.276	-0.433	16.103	0.841585	NA	NA	0.399651	0.307762	NA	0.42	NA	8.4767156
804	7	107593989	107593989	T	C	exonic	LAMB1	NA	nonsynonymous SNV	LAMB1:NM_002291:exon22:c.A3065G:p.Q1022R	exonic	ENSG00000091136	NA	nonsynonymous SNV	ENSG00000091136:ENST00000393561:exon20:c.A3137G:p.Q1046R,ENSG00000091136:ENST00000222399:exon22:c.A3065G:p.Q1022R	NA	NA	7q31.1	NA	Name=MafK_(ab50322)	Name=6	NA	rs20556	0.7	0.7	0.705	0.695487	0.5865	0.8482	0.6571	0.7458	0.6094	0.58	0.84	0.62	0.75	0.6447	0.84	1	T	0.0	B	0.002	B	.	.	0.000	P	-0.52	N	0.13	T	-0.952	T	0.000	T	0.023	-1.384	0.025	-1.99	-0.742	-1.282	12.867	-1.38389	NA	0	0.625465	0.704721	NA	0.667	NA	8.4766684
804	10	115405664	115405664	C	T	exonic	NRAP	NA	nonsynonymous SNV	NRAP:NM_001261463:exon11:c.G1030A:p.A344T,NRAP:NM_006175:exon11:c.G1030A:p.A344T,NRAP:NM_198060:exon11:c.G1030A:p.A344T	exonic	ENSG00000197893	NA	nonsynonymous SNV	ENSG00000197893:ENST00000359988:exon11:c.G1030A:p.A344T,ENSG00000197893:ENST00000360478:exon11:c.G1030A:p.A344T,ENSG00000197893:ENST00000369358:exon11:c.G1030A:p.A344T,ENSG00000197893:ENST00000369360:exon11:c.G1030A:p.A344T	NA	NA	10q25.3	NA	NA	NA	NA	rs3121478	0.59	0.59	0.577	0.564297	0.6243	0.7103	0.6715	0.2965	0.638	0.61	0.71	0.68	0.33	0.6175	0.71	0.37	T	0.044	B	0.022	B	0.000	D	0.999	P	0.69	N	2.58	T	-1.053	T	0.000	T	0.132	0.436	6.368	2.78	0.407	1.976	11.252	0.436087	NA	0.48	0.614884	0.35202	NA	0.594	NA	8.4766494
804	10	115405615	115405615	T	C	exonic	NRAP	NA	nonsynonymous SNV	NRAP:NM_001261463:exon11:c.A1079G:p.Q360R,NRAP:NM_006175:exon11:c.A1079G:p.Q360R,NRAP:NM_198060:exon11:c.A1079G:p.Q360R	exonic	ENSG00000197893	NA	nonsynonymous SNV	ENSG00000197893:ENST00000359988:exon11:c.A1079G:p.Q360R,ENSG00000197893:ENST00000360478:exon11:c.A1079G:p.Q360R,ENSG00000197893:ENST00000369358:exon11:c.A1079G:p.Q360R,ENSG00000197893:ENST00000369360:exon11:c.A1079G:p.Q360R	Score=284;Name=lod=19	NA	10q25.3	NA	NA	NA	NA	rs3127106	0.59	0.59	0.566	0.564297	0.6243	0.7103	0.6715	0.2965	0.638	0.61	0.71	0.68	0.33	0.6175	0.71	1	T	0.0	B	0.001	B	0.000	N	1.000	P	0.26	N	2.56	T	-0.959	T	0.000	T	0.145	0.664	7.556	4.61	0.826	1.741	7.126	0.663662	NA	0.78	0.615	0.352247	NA	0.594	NA	8.4765334
804	19	1438865	1438865	C	T	exonic	RPS15	NA	synonymous SNV	RPS15:NM_001018:exon2:c.C63T:p.D21D	exonic	ENSG00000115268	NA	synonymous SNV	ENSG00000115268:ENST00000592588:exon1:c.C60T:p.D20D,ENSG00000115268:ENST00000586096:exon2:c.C63T:p.D21D,ENSG00000115268:ENST00000586686:exon2:c.C63T:p.D21D,ENSG00000115268:ENST00000589656:exon2:c.C63T:p.D21D,ENSG00000115268:ENST00000593052:exon2:c.C84T:p.D28D	Score=650;Name=lod=583	NA	19p13.3	NA	Name=ZBTB7A_(SC-34508)	Name=10	NA	rs7251165	0.04	0.04	0.044	0.0493211	0.0537	0.0298	0.0303	0.0461	0.0828	0.05	0.03	0.02	0.03	0.0873	0.051	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.011268	2.011268	NA	0.050572	0.044704	NA	0.022	NA	8.4750946
805	11	116729013	116729013	T	C	exonic	SIK3	NA	synonymous SNV	SIK3:NM_025164:exon20:c.A2850G:p.Q950Q	exonic	ENSG00000160584	NA	synonymous SNV	ENSG00000160584:ENST00000375288:exon19:c.A855G:p.Q285Q,ENSG00000160584:ENST00000292055:exon20:c.A2850G:p.Q950Q,ENSG00000160584:ENST00000375300:exon20:c.A3024G:p.Q1008Q,ENSG00000160584:ENST00000446921:exon20:c.A2844G:p.Q948Q,ENSG00000160584:ENST00000542607:exon20:c.A2670G:p.Q890Q,ENSG00000160584:ENST00000434315:exon21:c.A2367G:p.Q789Q	Score=490;Name=lod=131	NA	11q23.3	NA	Name=GATA-2,p300	NA	NA	rs539858	0.18	0.18	0.15	0.232827	0.0427	0.13	0.1167	0.5492	0.1892	0.04	0.13	0.12	0.52	0.1016	0.52	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.914	T	0.000	T	.	-1.216	0.064	0.133	-0.223	0.562	4.117	-1.216407	NA	NA	0.048766	0.459337	NA	0.08	NA	8.4736006
805	18	47093864	47093864	C	T	exonic	LIPG	NA	nonsynonymous SNV	LIPG:NM_006033:exon3:c.C332T:p.T111I	exonic	ENSG00000101670	NA	nonsynonymous SNV	ENSG00000101670:ENST00000261292:exon3:c.C332T:p.T111I,ENSG00000101670:ENST00000427224:exon3:c.C332T:p.T111I,ENSG00000101670:ENST00000577628:exon3:c.C440T:p.T147I,ENSG00000101670:ENST00000579750:exon3:c.C296T:p.T99I,ENSG00000101670:ENST00000580036:exon3:c.C332T:p.T111I	NA	NA	18q21.1	NA	NA	NA	NA	rs2000813	0.24	0.24	0.224	0.240615	0.3022	0.3274	0.2277	0.0673	0.3313	0.29	0.32	0.28	0.06	0.2665	0.32	0.09	T	0.005	B	0.006	B	0.398	N	1.000	P	0.265	N	-2.67	D	-1.077	T	0.000	T	0.289	1.239	10.03	-3.65	-0.342	0.406	5.018	1.238711	1.238711	0.05	0.291395	0.107354	NA	0.145	NA	8.4732384
805	14	69727121	69727121	G	A	exonic	GALNT16	NA	synonymous SNV	GALNT16:NM_001168368:exon1:c.G114A:p.R38R,GALNT16:NM_020692:exon1:c.G114A:p.R38R	exonic	ENSG00000100626	NA	synonymous SNV	ENSG00000100626:ENST00000337827:exon1:c.G114A:p.R38R,ENSG00000100626:ENST00000448469:exon1:c.G114A:p.R38R,ENSG00000100626:ENST00000553471:exon1:c.G114A:p.R38R,ENSG00000100626:ENST00000553669:exon1:c.G114A:p.R38R	Score=680;Name=lod=777	NA	14q24.1	Score=792;Name=V$YY1_02	NA	Name=79	NA	rs150774678	0.03	0.03	0.037	0.0235623	0.0736	NA	0.0259	0.003	0.0225	0.07	NA	0.04	0.0041	0.0601	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.969275	2.969275	NA	0.060275	0.010682	NA	NA	NA	8.4726916
805	4	26585881	26585881	C	T	exonic	TBC1D19	NA	synonymous SNV	TBC1D19:NM_018317:exon1:c.C66T:p.S22S	exonic	ENSG00000109680	NA	synonymous SNV	ENSG00000109680:ENST00000264866:exon1:c.C66T:p.S22S,ENSG00000109680:ENST00000505206:exon1:c.C66T:p.S22S,ENSG00000109680:ENST00000511789:exon1:c.C66T:p.S22S	Score=389;Name=lod=51	NA	4p15.2	Score=838;Name=V$OCT1_Q6	Name=Pol2,ZNF263,KAP1,Pol2-4H8,TBP	Name=6	NA	rs4692549	0.31	0.31	0.295	0.313099	0.3946	0.3601	0.2795	0.1672	0.4018	0.4	0.35	0.31	0.14	0.3917	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.646821	1.646821	NA	0.408488	0.215842	NA	0.232	NA	8.4718786
805	3	52554304	52554304	G	C	exonic	STAB1	NA	nonsynonymous SNV	STAB1:NM_015136:exon52:c.G5497C:p.A1833P	exonic	ENSG00000010327	NA	nonsynonymous SNV	ENSG00000010327:ENST00000321725:exon52:c.G5497C:p.A1833P	NA	NA	3p21.1	NA	NA	NA	NA	rs7630214	0.98	0.98	0.985	0.983227	0.9632	1	0.9784	0.997	0.9714	0.97	1	0.98	0.99	0.96	1	0.33	T	0.0	B	0.0	B	0.050	N	1.000	P	-0.295	N	-2.79	D	-0.943	T	0.000	T	0.03	1.097	9.476	5.15	1.594	1.192	14.392	1.09692	NA	0.17	0.941279	0.988198	NA	0.993	NA	8.4688544
805	1	26664968	26664968	C	T	exonic	AIM1L	NA	synonymous SNV	AIM1L:NM_001039775:exon7:c.G3345A:p.L1115L	exonic	ENSG00000176092	NA	synonymous SNV	ENSG00000176092:ENST00000308182:exon6:c.G210A:p.L70L,ENSG00000176092:ENST00000527815:exon6:c.G723A:p.L241L	Score=472;Name=lod=111	NA	1p36.11	NA	NA	NA	NA	rs11247919	0.3	0.3	0.296	0.286142	0.4284	0.0556	0.2161	0.4395	0.2198	0.45	0.04	0.23	0.42	0.355	0.45	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.899	T	0.000	T	.	2.465	14.2	4.1	1.140	0.883	10.496	2.465092	2.465092	NA	0.414884	0.432365	NA	0.304	NA	8.4683826
805	15	75499995	75499995	T	G	exonic	C15orf39	NA	nonsynonymous SNV	C15orf39:NM_015492:exon2:c.T1606G:p.S536A	exonic	ENSG00000167173	NA	nonsynonymous SNV	ENSG00000167173:ENST00000567617:exon1:c.T1606G:p.S536A,ENSG00000167173:ENST00000360639:exon2:c.T1606G:p.S536A,ENSG00000167173:ENST00000394987:exon2:c.T1606G:p.S536A	NA	NA	15q24.2	Score=876;Name=V$NFE2_01	NA	NA	NA	rs28509789	0.34	0.34	0.349	0.392372	0.2773	0.3264	0.4078	0.4697	0.4632	0.26	0.33	0.39	0.46	0.3163	0.46	0.77	T	0.0	B	0.001	B	0.213	N	1.000	P	0.895	L	-1.37	T	-0.993	T	0.000	T	0.139	-0.036	3.832	-3.54	-0.640	-0.873	0.270	-0.035507	NA	1	0.272251	0.445128	NA	0.29	NA	8.4674824
805	1	85113229	85113229	A	G	exonic	SSX2IP	NA	nonsynonymous SNV	SSX2IP:NM_001166294:exon13:c.T1651C:p.C551R,SSX2IP:NM_001166295:exon13:c.T1651C:p.C551R,SSX2IP:NM_001166293:exon14:c.T1732C:p.C578R,SSX2IP:NM_001166417:exon15:c.T1732C:p.C578R,SSX2IP:NM_014021:exon15:c.T1732C:p.C578R	exonic	ENSG00000117155	NA	nonsynonymous SNV	ENSG00000117155:ENST00000437941:exon13:c.T1651C:p.C551R,ENSG00000117155:ENST00000605755:exon13:c.T1651C:p.C551R,ENSG00000117155:ENST00000342203:exon14:c.T1732C:p.C578R	Score=309;Name=lod=24	NA	1p22.3	NA	NA	NA	NA	rs1057746	0.56	0.56	0.526	0.51258	0.6521	0.7034	0.5346	0.2458	0.5174	0.66	0.7	0.55	0.24	0.5838	0.7	0.11	T	0.01	B	0.01	B	0.025	N	0.000	P	0.69	N	0.81	T	-1.068	T	0.029	T	0.115	1.387	10.57	2.16	0.103	1.041	3.541	1.387185	1.387185	0.08	0.630814	0.294371	NA	0.522	NA	8.4666194
805	9	116136198	116136198	C	T	exonic	HDHD3	NA	nonsynonymous SNV	HDHD3:NM_031219:exon2:c.G437A:p.G146E	exonic	ENSG00000119431	NA	nonsynonymous SNV	ENSG00000119431:ENST00000238379:exon2:c.G437A:p.G146E,ENSG00000119431:ENST00000374180:exon3:c.G437A:p.G146E	NA	NA	9q32	NA	NA	Name=5	NA	rs1043836	0.56	0.56	0.557	0.586861	0.6233	0.4663	0.7017	0.4909	0.7219	0.63	0.44	0.67	0.53	0.6154	0.67	0.98	T	0.0	B	0.001	B	0.022	N	1.000	P	-1.235	N	1.2	T	-0.991	T	0.000	T	0.02	-2.447	0.003	-11.7	-3.303	-1.497	5.156	-2.446595	NA	1	0.629186	0.551294	NA	0.471	NA	8.4654474
805	5	156479426	156479426	T	C	exonic	HAVCR1	NA	nonsynonymous SNV	HAVCR1:NM_012206:exon3:c.A619G:p.T207A,HAVCR1:NM_001099414:exon4:c.A619G:p.T207A,HAVCR1:NM_001173393:exon4:c.A619G:p.T207A	exonic	ENSG00000113249	NA	nonsynonymous SNV	ENSG00000113249:ENST00000339252:exon3:c.A619G:p.T207A,ENSG00000113249:ENST00000425854:exon3:c.A619G:p.T207A,ENSG00000113249:ENST00000518745:exon4:c.A619G:p.T207A,ENSG00000113249:ENST00000522693:exon4:c.A619G:p.T207A,ENSG00000113249:ENST00000523175:exon4:c.A619G:p.T207A,ENSG00000113249:ENST00000544197:exon4:c.A619G:p.T207A	NA	NA	5q33.3	NA	Name=NANOG_(SC-33759)	Name=2	NA	rs12522248	0.23	0.23	0.216	0.226238	0.3042	0.1478	0.3386	0.1362	0.2689	0.3	0.15	0.35	0.13	0.2792	0.35	0.79	T	0.015	B	0.003	B	0.000	N	1.000	P	0	N	2.56	T	-0.932	T	0.000	T	0.205	-0.522	1.618	1.05	0.509	-0.117	0.621	-0.522318	NA	0.26	0.284678	0.169665	NA	NA	NA	8.4652554
806	12	6887020	6887020	T	C	exonic	LAG3	NA	nonsynonymous SNV	LAG3:NM_002286:exon7:c.T1364C:p.I455T	exonic	ENSG00000089692	NA	nonsynonymous SNV	ENSG00000089692:ENST00000203629:exon7:c.T1364C:p.I455T	Score=278;Name=lod=18	NA	12p13.31	NA	NA	NA	NA	rs870849	0.66	0.66	0.619	0.669329	0.6093	0.8224	0.6816	0.5787	0.6871	0.6	0.82	0.67	0.58	0.6392	0.82	0.01	D	0.01	B	0.003	B	0.169	N	0.000	P	2.19	M	2.54	T	-1.058	T	0.000	T	0.064	0.753	7.987	-1.58	-0.208	0.034	6.013	0.75253	NA	0.09	0.620581	0.555152	NA	0.63	NA	8.4642524
806	7	36445856	36445856	G	A	exonic	ANLN	NA	nonsynonymous SNV	ANLN:NM_018685:exon4:c.G554A:p.R185K	exonic	ENSG00000011426	NA	nonsynonymous SNV	ENSG00000011426:ENST00000265748:exon4:c.G554A:p.R185K,ENSG00000011426:ENST00000396068:exon4:c.G554A:p.R185K,ENSG00000011426:ENST00000424865:exon4:c.G488A:p.R163K	NA	NA	7p14.2	NA	NA	Name=37	NA	rs197367	0.62	0.62	0.595	0.620607	0.6262	0.7153	0.6254	0.4145	0.7924	0.65	0.76	0.62	0.41	0.6503	0.76	1	T	0.0	B	0.0	B	0.013	N	1.000	P	-2.175	N	4.08	T	-0.945	T	0.000	T	0.019	-1.109	0.134	3.61	0.171	1.913	9.673	-1.109485	NA	1	0.593605	0.432592	NA	0.543	NA	8.4632284
806	9	107515214	107515214	G	A	exonic	NIPSNAP3A	NA	nonsynonymous SNV	NIPSNAP3A:NM_015469:exon3:c.G299A:p.R100Q	exonic	ENSG00000136783	NA	nonsynonymous SNV	ENSG00000136783:ENST00000374767:exon3:c.G299A:p.R100Q	Score=506;Name=lod=152	NA	9q31.1	NA	NA	NA	NA	rs2274870	0.65	0.65	0.685	0.63758	0.6173	0.5228	0.7118	0.7648	0.5521	0.61	0.55	0.69	0.77	0.618	0.77	0.1	T	0.95	P	0.675	P	0.000	N	0.071	P	3.295	M	-0.28	T	-0.945	T	0.000	T	0.081	4.18	21.6	1.26	0.243	0.876	6.559	4.179941	4.179941	0.04	0.636163	0.752837	NA	0.609	NA	8.4618704
806	16	88781614	88781614	G	C	exonic	CTU2	NA	nonsynonymous SNV	CTU2:NM_001012762:exon14:c.G1444C:p.G482R	exonic	ENSG00000174177	NA	nonsynonymous SNV	ENSG00000174177:ENST00000312060:exon14:c.G1444C:p.G482R	Score=289;Name=lod=20	NA	16q24.3	NA	NA	NA	NA	rs1058158	0.18	0.18	0.163	0.193091	0.3082	0.0913	0.1844	0.1021	0.3088	0.29	0.08	0.22	0.11	0.2588	0.31	0.46	T	0.322	B	0.136	B	.	.	0.000	P	.	.	2.55	T	-0.891	T	0.000	T	.	0.617	7.321	2.13	0.699	0.362	9.030	0.61697	NA	0.27	0.307289	0.133212	NA	0.188	NA	8.4590444
806	14	93412743	93412743	G	A	exonic	ITPK1	NA	synonymous SNV	ITPK1:NM_001142593:exon10:c.C834T:p.F278F,ITPK1:NM_001142594:exon10:c.C834T:p.F278F,ITPK1:NM_014216:exon10:c.C834T:p.F278F	exonic	ENSG00000100605	NA	synonymous SNV	ENSG00000100605:ENST00000555495:exon8:c.C477T:p.F159F,ENSG00000100605:ENST00000267615:exon10:c.C834T:p.F278F,ENSG00000100605:ENST00000354313:exon10:c.C834T:p.F278F,ENSG00000100605:ENST00000556603:exon10:c.C834T:p.F278F	Score=551;Name=lod=231	NA	14q32.12	NA	Name=BRCA1_(C-1863),AP-2alpha,JunD,FOXA1_(C-20),Ini1,RFX5_(N-494)	Name=105	NA	rs2295394	0.09	0.09	0.093	0.108826	0.0606	0.2133	0.0461	0.0756	0.1401	0.05	0.2	0.05	0.07	0.0845	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.312988	1.312988	NA	0.063256	0.082842	NA	0.072	NA	8.4583106
806	17	72838649	72838649	C	A	exonic	GRIN2C	NA	nonsynonymous SNV	GRIN2C:NM_000835:exon13:c.G3627T:p.R1209S	exonic	ENSG00000161509	NA	nonsynonymous SNV	ENSG00000161509:ENST00000293190:exon13:c.G3627T:p.R1209S	NA	NA	17q25.1	Score=750;Name=V$SEF1_C	NA	NA	NA	rs3744215	0.31	0.31	0.312	0.289537	0.2942	0.381	0.1931	0.2852	0.2648	0.3	0.4	0.2	0.3	0.2987	0.4	0.04	D	0.001	B	0.001	B	0.726	N	0.000	P	0.805	L	2.84	T	-0.907	T	0.000	T	0.068	2.632	14.76	-1.36	-0.045	0.514	3.608	2.631722	2.631722	NA	0.283104	0.307762	ID=COSM437337,COSM1479974;OCCURENCE=2(breast)	0.268	NA	8.4573294
806	16	56601720	56601720	A	G	exonic	MT4	NA	nonsynonymous SNV	MT4:NM_032935:exon2:c.A89G:p.Y30C	exonic	ENSG00000102891	NA	nonsynonymous SNV	ENSG00000102891:ENST00000219162:exon2:c.A89G:p.Y30C	Score=525;Name=lod=182	NA	16q12.2	NA	NA	NA	NA	rs666636	0.86	0.86	0.821	0.858427	0.9662	0.7183	0.9496	0.7595	0.9611	0.96	0.73	0.96	0.76	0.9351	0.98	1	T	0.0	B	0.0	B	0.000	N	1.000	P	.	.	3.38	T	-0.938	T	0.000	T	0.389	0.492	6.668	5.73	1.449	4.767	10.951	0.491731	NA	1	0.975935	0.808584	NA	NA	NA	8.4560984
806	7	618938	618938	A	G	exonic	PRKAR1B	NA	synonymous SNV	PRKAR1B:NM_001164758:exon9:c.T846C:p.I282I,PRKAR1B:NM_001164759:exon9:c.T846C:p.I282I,PRKAR1B:NM_001164760:exon9:c.T846C:p.I282I,PRKAR1B:NM_001164761:exon9:c.T846C:p.I282I,PRKAR1B:NM_001164762:exon9:c.T846C:p.I282I,PRKAR1B:NM_002735:exon9:c.T846C:p.I282I	exonic	ENSG00000188191	NA	synonymous SNV	ENSG00000188191:ENST00000360274:exon9:c.T846C:p.I282I,ENSG00000188191:ENST00000403562:exon9:c.T846C:p.I282I,ENSG00000188191:ENST00000406797:exon9:c.T846C:p.I282I,ENSG00000188191:ENST00000430040:exon9:c.T846C:p.I282I,ENSG00000188191:ENST00000537384:exon9:c.T846C:p.I282I,ENSG00000188191:ENST00000544935:exon9:c.T846C:p.I282I	NA	NA	7p22.3	Score=771;Name=V$E2F_01	NA	NA	NA	rs3211362	0.4	0.4	0.394	0.363618	0.4443	0.2688	0.3357	0.5408	0.1585	0.44	0.25	0.36	0.53	0.3689	0.53	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.110	T	0.000	T	.	-0.335	2.413	-10.3	-2.912	-2.821	17.059	-0.334936	NA	NA	0.398045	0.501362	NA	0.457	NA	8.4554216
807	16	58616984	58616984	T	C	exonic	CNOT1	NA	synonymous SNV	CNOT1:NM_001265612:exon9:c.A909G:p.G303G,CNOT1:NM_016284:exon9:c.A909G:p.G303G,CNOT1:NM_206999:exon9:c.A909G:p.G303G	exonic	ENSG00000125107	NA	synonymous SNV	ENSG00000125107:ENST00000317147:exon9:c.A909G:p.G303G,ENSG00000125107:ENST00000441024:exon9:c.A909G:p.G303G,ENSG00000125107:ENST00000567188:exon9:c.A909G:p.G303G,ENSG00000125107:ENST00000569240:exon9:c.A909G:p.G303G	Score=701;Name=lod=939	NA	16q21	Score=868;Name=V$TAL1BETAITF2_01	Name=CEBPB	Name=6	NA	rs17854029	0.22	0.22	0.202	0.202077	0.4264	0.0288	0.268	0.1218	0.2117	0.41	0.02	0.3	0.13	0.3379	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.460134	1.460134	NA	0.449186	0.187443	ID=COSM435466,COSM435467;OCCURENCE=1(breast)	0.232	NA	8.4531806
807	22	30771554	30771554	T	G	exonic	CCDC157	NA	nonsynonymous SNV	CCDC157:NM_001017437:exon10:c.T1759G:p.S587A	exonic	ENSG00000187860	NA	nonsynonymous SNV	ENSG00000187860:ENST00000338306:exon10:c.T1759G:p.S587A,ENSG00000187860:ENST00000405659:exon10:c.T1759G:p.S587A	Score=469;Name=lod=107	NA	22q12.2	NA	NA	NA	NA	rs2015035	0.98	0.98	0.978	0.986422	0.9612	1	0.9712	0.9985	0.9928	0.96	1	0.96	1	0.9684	1	1	T	0.0	B	0.0	B	0.000	N	0.000	P	-1.955	N	-1.06	T	-0.935	T	0.000	T	0.233	3.152	16.54	5.24	1.223	4.139	13.418	3.152334	3.152334	0.01	0.951279	0.988425	NA	0.978	NA	8.4524544
807	11	7022531	7022531	A	T	exonic	ZNF214	NA	nonsynonymous SNV	ZNF214:NM_013249:exon3:c.T383A:p.L128H	exonic	ENSG00000149050	NA	nonsynonymous SNV	ENSG00000149050:ENST00000278314:exon3:c.T383A:p.L128H,ENSG00000149050:ENST00000536068:exon4:c.T383A:p.L128H	NA	NA	11p15.4	NA	NA	NA	NA	rs1156525	0.61	0.61	0.576	0.575679	0.6223	0.7073	0.6268	0.357	0.6513	0.64	0.78	0.62	0.37	0.6266	0.78	0.6	T	0.0	B	0.0	B	0.489	N	1.000	P	0	N	3.28	T	-1.033	T	0.000	T	0.084	-3.896	0.001	-3.27	-1.265	-1.814	2.265	-3.896005	NA	0.54	0.633644	0.4005	NA	0.486	NA	8.4507894
807	19	36594659	36594659	A	T	exonic	WDR62	NA	nonsynonymous SNV	WDR62:NM_001083961:exon30:c.A3929T:p.Q1310L,WDR62:NM_173636:exon30:c.A3914T:p.Q1305L	exonic	ENSG00000075702	NA	nonsynonymous SNV	ENSG00000075702:ENST00000270301:exon30:c.A3914T:p.Q1305L,ENSG00000075702:ENST00000401500:exon30:c.A3929T:p.Q1310L	NA	NA	19q13.12	NA	Name=Pol2	NA	NA	rs2074435	0.73	0.73	0.742	0.729633	0.6252	0.7956	0.7392	0.8192	0.6411	0.63	0.8	0.7	0.83	0.6536	0.83	0.39	T	0.0	B	0.0	B	0.581	N	1.000	P	-0.975	N	1.25	T	-0.988	T	0.000	T	0.032	0.708	7.775	2.09	-0.055	0.511	2.656	0.708344	NA	0.51	0.605116	0.78325	NA	0.594	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000079454.1;CLNDSDB=.;CLNDSDBID=.	8.4494174
807	19	52004743	52004743	G	A	exonic	SIGLEC12	NA	nonsynonymous SNV	SIGLEC12:NM_053003:exon1:c.C245T:p.A82V	exonic	ENSG00000254521	NA	nonsynonymous SNV	ENSG00000254521:ENST00000291707:exon1:c.C245T:p.A82V,ENSG00000254521:ENST00000596742:exon1:c.C245T:p.A82V	NA	NA	19q13.41	NA	NA	NA	NA	rs3810110	0.56	0.56	0.54	0.569489	0.6322	0.369	0.7248	0.5522	0.6247	0.64	0.37	0.7	0.55	0.6133	0.7	0.02	D	0.118	B	0.007	B	.	.	1.000	P	1.155	L	1.95	T	-0.975	T	0.000	T	0.017	0.536	6.904	-3.74	-0.727	-1.317	0.722	0.536379	NA	0.13	0.640233	0.569905	ID=COSM148704;OCCURENCE=1(stomach)	0.536	NA	8.4476004
807	5	96139595	96139595	G	A	exonic	ERAP1	NA	nonsynonymous SNV	ERAP1:NM_001040458:exon2:c.C35T:p.T12I,ERAP1:NM_001198541:exon2:c.C35T:p.T12I,ERAP1:NM_016442:exon2:c.C35T:p.T12I	exonic	ENSG00000164307	NA	nonsynonymous SNV	ENSG00000164307:ENST00000296754:exon2:c.C35T:p.T12I,ENSG00000164307:ENST00000443439:exon2:c.C35T:p.T12I,ENSG00000164307:ENST00000507154:exon3:c.C35T:p.T12I	NA	NA	5q15	NA	NA	NA	NA	rs72773968	0.07	0.07	0.058	0.0714856	0.1382	0.004	0.1643	0.0053	0.0961	0.13	0.0017	0.15	0.01	0.1113	0.15	0.25	T	0.741	P	0.372	B	0.542	N	1.000	P	0	N	5.03	T	-1.008	T	0.000	T	0.303	1.943	12.45	2.49	0.211	0.728	14.431	1.943106	1.943106	0.06	0.136628	0.023604	NA	0.174	NA	8.4472054
807	13	113739226	113739226	T	C	exonic	MCF2L	NA	synonymous SNV	MCF2L:NM_001112732:exon19:c.T2082C:p.Y694Y,MCF2L:NM_024979:exon19:c.T2076C:p.Y692Y	exonic	ENSG00000126217	NA	synonymous SNV	ENSG00000126217:ENST00000375597:exon19:c.T2076C:p.Y692Y,ENSG00000126217:ENST00000375601:exon19:c.T2094C:p.Y698Y,ENSG00000126217:ENST00000375604:exon19:c.T2253C:p.Y751Y,ENSG00000126217:ENST00000397030:exon19:c.T2181C:p.Y727Y,ENSG00000126217:ENST00000421756:exon19:c.T2094C:p.Y698Y,ENSG00000126217:ENST00000423482:exon19:c.T2076C:p.Y692Y,ENSG00000126217:ENST00000434480:exon19:c.T2100C:p.Y700Y,ENSG00000126217:ENST00000442652:exon19:c.T2172C:p.Y724Y,ENSG00000126217:ENST00000535094:exon19:c.T2082C:p.Y694Y,ENSG00000126217:ENST00000375608:exon20:c.T2172C:p.Y724Y	Score=587;Name=lod=323	NA	13q34	NA	NA	NA	NA	rs2281723	0.12	0.12	0.136	0.11222	0.0656	0.2649	0.0865	0.0764	0.0695	0.06	0.24	0.09	0.09	0.0845	0.24	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	1.052	9.298	-3.09	-0.859	0.321	15.265	1.052343	NA	NA	0.070581	0.069451	NA	0.051	NA	8.4459856
807	1	248059703	248059703	T	A	exonic	OR2W3	NA	nonsynonymous SNV	OR2W3:NM_001001957:exon1:c.T815A:p.M272K	exonic	ENSG00000238243	NA	nonsynonymous SNV	ENSG00000238243:ENST00000360358:exon1:c.T815A:p.M272K,ENSG00000238243:ENST00000537741:exon3:c.T815A:p.M272K	NA	NA	1q44	Score=835;Name=V$NFKB_Q6	NA	NA	NA	rs11204545	0.51	0.51	0.484	0.478035	0.665	0.5893	0.4553	0.2648	0.4755	0.66	0.54	0.47	0.29	0.5747	0.66	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-2.59	N	8.92	T	-1.028	T	0.000	T	0.087	-1.225	0.06	5.29	1.038	0.366	9.445	-1.225422	NA	1	0.648605	0.35724	NA	0.529	NA	8.4450284
808	8	22053701	22053701	T	G	intronic	BMP1	NA	NA	NA	exonic	ENSG00000168487	NA	stopgain	ENSG00000168487:ENST00000397814:exon14:c.T1773G:p.Y591X,ENSG00000168487:ENST00000471755:exon14:c.T1773G:p.Y591X	NA	NA	8p21.3	NA	NA	NA	NA	rs80055120	0.01	0.01	0.016	0.0141773	0.0298	NA	0.0144	0.003	0.0276	0.02	NA	0.02	0.01	0.015	0.02	0.05	D	.	.	.	.	.	.	1.000	N	.	.	.	.	.	.	.	.	.	2.98	15.94	-2.25	-0.518	-0.573	6.941	2.980307	2.980307	0.11	0.011301	0.002854	NA	NA	NA	8.443899
808	1	54060248	54060248	T	C	exonic	GLIS1	NA	nonsynonymous SNV	GLIS1:NM_147193:exon3:c.A328G:p.T110A	exonic	ENSG00000174332	NA	nonsynonymous SNV	ENSG00000174332:ENST00000312233:exon3:c.A328G:p.T110A	Score=423;Name=lod=70	NA	1p32.3	Score=807;Name=V$OLF1_01	NA	NA	NA	rs4307514	0.21	0.21	0.207	0.214856	0.2962	0.1885	0.1599	0.1074	0.3425	0.3	0.2	0.18	0.12	0.2853	0.31	0.98	T	0.0	B	0.0	B	0.059	N	1.000	P	0	N	3.01	T	-0.910	T	0.000	T	0.008	0.097	4.52	1.81	0.041	0.857	5.501	0.096571	NA	NA	0.309737	0.107717	ID=COSM426461;OCCURENCE=1(breast)	0.174	NA	8.4420964
808	18	55104016	55104016	T	C	exonic	ONECUT2	NA	synonymous SNV	ONECUT2:NM_004852:exon1:c.T1068C:p.F356F	exonic	ENSG00000119547	NA	synonymous SNV	ENSG00000119547:ENST00000491143:exon1:c.T1068C:p.F356F	Score=731;Name=lod=1247	NA	18q21.31	NA	Name=AP-2alpha,AP-2gamma	Name=8	NA	rs61735644	0.11	0.11	0.105	0.158347	0.0646	0.1448	0.147	0.2224	0.1902	0.06	0.13	0.1	0.18	0.1008	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.90232	NA	NA	0.059738	0.178588	ID=COSM1559502;OCCURENCE=2(central_nervous_system)	0.101	NA	8.4415286
808	11	86159223	86159223	C	T	exonic	ME3	NA	synonymous SNV	ME3:NM_001014811:exon10:c.G1206A:p.V402V,ME3:NM_001161586:exon11:c.G1206A:p.V402V,ME3:NM_006680:exon11:c.G1206A:p.V402V	exonic	ENSG00000151376	NA	synonymous SNV	ENSG00000151376:ENST00000393324:exon10:c.G1206A:p.V402V,ENSG00000151376:ENST00000359636:exon11:c.G1206A:p.V402V,ENSG00000151376:ENST00000524826:exon11:c.G1206A:p.V402V,ENSG00000151376:ENST00000543262:exon11:c.G1206A:p.V402V	Score=643;Name=lod=545	NA	11q14.2	Score=894;Name=V$OLF1_01	NA	Name=4	NA	rs34662182	0.04	0.04	0.037	0.0359425	0.0855	0.001	0.0591	0.003	0.0491	0.09	0.0017	0.07	0.0041	0.0604	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.173804	NA	NA	0.079553	0.015441	ID=COSM429985;OCCURENCE=1(breast)	0.014	NA	8.4412136
808	12	68707287	68707287	G	A	exonic	MDM1	NA	nonsynonymous SNV	MDM1:NM_001205028:exon11:c.C1550T:p.P517L,MDM1:NM_017440:exon11:c.C1655T:p.P552L	exonic	ENSG00000111554	NA	nonsynonymous SNV	ENSG00000111554:ENST00000540418:exon10:c.C815T:p.P272L,ENSG00000111554:ENST00000303145:exon11:c.C1655T:p.P552L,ENSG00000111554:ENST00000411698:exon11:c.C1550T:p.P517L	NA	NA	12q15	NA	NA	NA	NA	rs2306392	0.22	0.22	0.217	0.211462	0.3052	0.1736	0.2161	0.0726	0.3384	0.31	0.17	0.26	0.1	0.2748	0.31	.	.	0.003	B	0.004	B	0.017	N	1.000	P	0.345	N	2.25	T	-0.911	T	0.000	T	0.05	-0.687	1.012	2.23	0.258	3.017	9.831	-0.687468	NA	0.58	0.31314	0.126419	NA	0.268	NA	8.4401934
808	1	18808292	18808292	C	A	exonic	KLHDC7A	NA	nonsynonymous SNV	KLHDC7A:NM_152375:exon1:c.C817A:p.H273N	exonic	ENSG00000179023	NA	nonsynonymous SNV	ENSG00000179023:ENST00000400664:exon1:c.C817A:p.H273N	Score=363;Name=lod=40	NA	1p36.13	NA	NA	NA	NA	rs2992753	0.72	0.72	0.721	0.672923	0.6113	0.8958	0.7277	0.6604	0.4847	0.62	0.91	0.7	0.67	0.6539	0.91	1	T	0.0	B	0.0	B	0.182	N	1.000	P	-0.895	N	-0.31	T	-0.948	T	0.000	T	0.012	-1.498	0.017	4.92	0.717	2.560	10.544	-1.498345	NA	1	0.628721	0.665002	NA	0.587	NA	8.4394124
808	19	55143157	55143157	G	A	exonic	LILRB1	NA	nonsynonymous SNV	LILRB1:NM_001081637:exon4:c.G277A:p.A93T,LILRB1:NM_001081638:exon4:c.G277A:p.A93T,LILRB1:NM_001081639:exon4:c.G277A:p.A93T,LILRB1:NM_006669:exon5:c.G277A:p.A93T	exonic	ENSG00000104972	NA	nonsynonymous SNV	ENSG00000104972:ENST00000396315:exon3:c.G277A:p.A93T,ENSG00000104972:ENST00000396317:exon3:c.G277A:p.A93T,ENSG00000104972:ENST00000396321:exon3:c.G277A:p.A93T,ENSG00000104972:ENST00000418536:exon3:c.G277A:p.A93T,ENSG00000104972:ENST00000421584:exon3:c.G277A:p.A93T,ENSG00000104972:ENST00000427581:exon3:c.G385A:p.A129T,ENSG00000104972:ENST00000448689:exon3:c.G277A:p.A93T,ENSG00000104972:ENST00000324602:exon4:c.G277A:p.A93T,ENSG00000104972:ENST00000396327:exon4:c.G277A:p.A93T,ENSG00000104972:ENST00000396332:exon4:c.G277A:p.A93T,ENSG00000104972:ENST00000434867:exon4:c.G277A:p.A93T,ENSG00000104972:ENST00000396331:exon5:c.G277A:p.A93T	NA	NA	19q13.42	NA	NA	NA	NA	rs12460501	0.17	0.17	0.113	0.213858	0.1312	0.505	0.232	0.0575	0.1973	0.09	0.4	0.16	0.04	0.1879	0.4	0.12	T	0.967	D	0.792	P	0.015	N	1.000	P	1.495	L	2.48	T	-0.915	T	0.000	T	0.108	1.284	10.2	-0.338	-0.222	-0.346	5.539	1.283574	1.283574	0.11	0.074884	0.035406	NA	NA	NA	8.4393494
808	9	78506145	78506145	G	A	exonic	PCSK5	NA	synonymous SNV	PCSK5:NM_001190482:exon1:c.G48A:p.L16L,PCSK5:NM_006200:exon1:c.G48A:p.L16L	exonic	ENSG00000099139	NA	synonymous SNV	ENSG00000099139:ENST00000376752:exon1:c.G48A:p.L16L,ENSG00000099139:ENST00000376767:exon1:c.G48A:p.L16L,ENSG00000099139:ENST00000545128:exon1:c.G48A:p.L16L	Score=698;Name=lod=913	NA	9q21.13	Score=844;Name=V$AHRARNT_01	NA	Name=54	NA	rs7020560	0.1	0.1	0.101	0.116414	0.0825	NA	0.0476	0.3396	0.0184	0.08	NA	0.06	0.3	0.078	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.687935	1.687935	NA	0.068536	0.290418	NA	0.123	NA	8.4376306
808	13	73350079	73350079	T	C	exonic	DIS3	NA	nonsynonymous SNV	DIS3:NM_001128226:exon5:c.A716G:p.N239S,DIS3:NM_014953:exon5:c.A806G:p.N269S	exonic	ENSG00000083520	NA	nonsynonymous SNV	ENSG00000083520:ENST00000377767:exon5:c.A806G:p.N269S,ENSG00000083520:ENST00000377780:exon5:c.A716G:p.N239S,ENSG00000083520:ENST00000490646:exon5:c.A806G:p.N269S,ENSG00000083520:ENST00000545453:exon6:c.A320G:p.N107S	NA	NA	13q22.1	NA	NA	NA	NA	rs4883918	0.32	0.32	0.302	0.327077	0.2634	0.4534	0.4741	0.0825	0.4888	0.27	0.49	0.44	0.11	0.3363	0.49	0.75	T	0.0	B	0.0	B	0.180	N	1.000	P	0.805	L	2.09	T	-0.938	T	0.000	T	0.018	-0.489	1.751	-8.07	-1.333	0.585	14.091	-0.489183	NA	0.5	0.296417	0.113987	NA	0.239	NA	8.4372164
809	10	106022789	106022789	C	A	exonic	GSTO1	NA	nonsynonymous SNV	GSTO1:NM_001191003:exon4:c.C335A:p.A112D,GSTO1:NM_004832:exon4:c.C419A:p.A140D	exonic	ENSG00000148834	NA	nonsynonymous SNV	ENSG00000148834:ENST00000445155:exon3:c.C335A:p.A112D,ENSG00000148834:ENST00000369713:exon4:c.C419A:p.A140D,ENSG00000148834:ENST00000539281:exon4:c.C335A:p.A112D	NA	NA	10q25.1	NA	NA	NA	NA	rs4925	0.21	0.21	0.201	0.177316	0.337	0.13	0.2075	0.0696	0.1861	0.34	0.15	0.24	0.07	0.252	0.34	0.35	T	0.234	B	0.106	B	0.047	N	0.000	P	-0.66	N	2.61	T	-0.906	T	0.000	T	0.322	2.202	13.32	3.93	1.389	0.831	11.884	2.201635	2.201635	0.01	0.309884	0.109169	ID=COSM147037;OCCURENCE=1(stomach)	0.138	NA	8.4344494
809	1	248059712	248059712	T	C	exonic	OR2W3	NA	nonsynonymous SNV	OR2W3:NM_001001957:exon1:c.T824C:p.M275T	exonic	ENSG00000238243	NA	nonsynonymous SNV	ENSG00000238243:ENST00000360358:exon1:c.T824C:p.M275T,ENSG00000238243:ENST00000537741:exon3:c.T824C:p.M275T	Score=363;Name=lod=40	NA	1q44	NA	NA	NA	NA	rs11204546	0.51	0.51	0.484	0.479832	0.667	0.5903	0.4568	0.264	0.4816	0.66	0.54	0.47	0.29	0.5799	0.66	0.83	T	0.0	B	0.0	B	0.000	N	1.000	P	-2.94	N	8.88	T	-1.069	T	0.000	T	0.059	-1.352	0.028	5.29	1.488	0.343	13.231	-1.352137	NA	1	0.65314	0.358148	NA	0.536	NA	8.4332934
809	5	171481606	171481606	A	G	exonic	STK10	NA	synonymous SNV	STK10:NM_005990:exon17:c.T2619C:p.C873C	exonic	ENSG00000072786	NA	synonymous SNV	ENSG00000072786:ENST00000176763:exon17:c.T2619C:p.C873C	Score=535;Name=lod=199	NA	5q35.1	NA	NA	NA	NA	rs10155597	0.42	0.42	0.431	0.390575	0.4165	0.3978	0.3271	0.472	0.2914	0.42	0.41	0.37	0.45	0.3937	0.47	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.074	T	0.000	T	.	0.868	8.518	-5.08	-1.705	-0.690	16.206	0.868179	NA	NA	0.425233	0.467998	NA	0.435	NA	8.4312336
809	1	34090679	34090679	T	C	exonic	CSMD2	NA	synonymous SNV	CSMD2:NM_052896:exon34:c.A5352G:p.Q1784Q	exonic	ENSG00000121904	NA	synonymous SNV	ENSG00000121904:ENST00000373380:exon13:c.A2091G:p.Q697Q,ENSG00000121904:ENST00000241312:exon34:c.A5352G:p.Q1784Q,ENSG00000121904:ENST00000373381:exon34:c.A5472G:p.Q1824Q	Score=503;Name=lod=147	NA	1p35.1	NA	Name=CTCFL_(SC-98982),E2F6_(H-50),SMC3_(ab9263),Egr-1,CTCF_(SC-5916),CTCF_(C-20),Rad21,CTCF	Name=9	NA	rs16835683	0.08	0.08	0.082	0.0948482	0.0845	0.1538	0.0418	0.0749	0.1094	0.08	0.13	0.04	0.07	0.0775	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.456902	1.456902	NA	0.075	0.065592	NA	0.072	NA	8.4296666
809	1	201973565	201973565	G	A	exonic	RNPEP	NA	nonsynonymous SNV	RNPEP:NM_020216:exon10:c.G1735A:p.V579I	exonic	ENSG00000176393	NA	nonsynonymous SNV	ENSG00000176393:ENST00000367286:exon9:c.G1618A:p.V540I,ENSG00000176393:ENST00000295640:exon10:c.G1735A:p.V579I	NA	NA	1q32.1	NA	NA	NA	NA	rs3820439	0.31	0.31	0.303	0.33107	0.2942	0.3968	0.2435	0.2224	0.5102	0.31	0.39	0.29	0.23	0.3259	0.39	0.21	T	0.018	B	0.027	B	0.008	N	1.000	P	1.465	L	0.94	T	-0.956	T	0.000	T	0.029	0.844	8.411	2.54	0.635	1.254	6.141	0.8441	NA	0.35	0.283721	0.256468	NA	0.203	NA	8.4295124
809	12	6839913	6839913	C	T	exonic	COPS7A	NA	synonymous SNV	COPS7A:NM_001164093:exon6:c.C715T:p.L239L,COPS7A:NM_001164094:exon7:c.C715T:p.L239L,COPS7A:NM_001164095:exon7:c.C715T:p.L239L,COPS7A:NM_016319:exon7:c.C715T:p.L239L	exonic	ENSG00000111652	NA	synonymous SNV	ENSG00000111652:ENST00000534947:exon6:c.C715T:p.L239L,ENSG00000111652:ENST00000229251:exon7:c.C715T:p.L239L,ENSG00000111652:ENST00000534877:exon7:c.C715T:p.L239L,ENSG00000111652:ENST00000539735:exon7:c.C715T:p.L239L,ENSG00000111652:ENST00000543155:exon7:c.C715T:p.L239L	Score=516;Name=lod=166	NA	12p13.31	Score=877;Name=V$SREBP1_01	NA	Name=5	NA	rs2286730	0.12	0.12	0.136	0.109824	0.0656	0.0694	0.0591	0.2632	0.0256	0.07	0.06	0.08	0.29	0.0815	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.781054	NA	NA	0.091047	0.232864	NA	0.152	NA	8.4285196
809	2	231333763	231333763	A	G	exonic	SP100	NA	nonsynonymous SNV	SP100:NM_001206703:exon13:c.A1213G:p.M405V,SP100:NM_001080391:exon14:c.A1297G:p.M433V,SP100:NM_001206701:exon14:c.A1297G:p.M433V,SP100:NM_001206702:exon14:c.A1297G:p.M433V,SP100:NM_003113:exon14:c.A1297G:p.M433V,SP100:NM_001206704:exon15:c.A1192G:p.M398V	exonic	ENSG00000067066	NA	nonsynonymous SNV	ENSG00000067066:ENST00000452345:exon5:c.A292G:p.M98V,ENSG00000067066:ENST00000409824:exon13:c.A1222G:p.M408V,ENSG00000067066:ENST00000427101:exon13:c.A1213G:p.M405V,ENSG00000067066:ENST00000264052:exon14:c.A1297G:p.M433V,ENSG00000067066:ENST00000340126:exon14:c.A1297G:p.M433V,ENSG00000067066:ENST00000341950:exon14:c.A1297G:p.M433V,ENSG00000067066:ENST00000409112:exon14:c.A1297G:p.M433V,ENSG00000067066:ENST00000409341:exon14:c.A1297G:p.M433V,ENSG00000067066:ENST00000409897:exon15:c.A1192G:p.M398V	NA	NA	2q37.1	NA	NA	NA	NA	rs12724	0.18	0.18	0.174	0.179912	0.3221	0.0635	0.1729	0.0688	0.3088	0.31	0.06	0.19	0.1	0.2623	0.32	0.48	T	0.0	B	0.0	B	.	.	1.000	P	0.805	L	2.48	T	-1.039	T	0.000	T	0.305	-2.414	0.003	-4.21	-1.007	-0.538	0.246	-2.414046	NA	0.32	0.32147	0.099864	NA	0.138	NA	8.4274634
809	19	52004903	52004903	G	A	exonic	SIGLEC12	NA	stopgain	SIGLEC12:NM_053003:exon1:c.C85T:p.Q29X	exonic	ENSG00000254521	NA	stopgain	ENSG00000254521:ENST00000291707:exon1:c.C85T:p.Q29X,ENSG00000254521:ENST00000596742:exon1:c.C85T:p.Q29X	NA	NA	19q13.41	NA	NA	NA	NA	rs16982743	0.19	0.19	0.197	0.185903	0.2038	0.0427	0.1297	0.3676	0.1094	0.19	0.05	0.15	0.36	0.1797	0.36	0	D	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	2.623	14.73	0.297	0.150	0.887	5.304	2.622978	2.622978	0.08	0.189651	0.318656	NA	0.312	NA	8.426849
809	7	44259871	44259871	C	T	exonic	CAMK2B	NA	synonymous SNV	CAMK2B:NM_172084:exon15:c.G1140A:p.P380P,CAMK2B:NM_172083:exon17:c.G1230A:p.P410P,CAMK2B:NM_172081:exon18:c.G1302A:p.P434P,CAMK2B:NM_172079:exon19:c.G1347A:p.P449P,CAMK2B:NM_172080:exon19:c.G1344A:p.P448P,CAMK2B:NM_172082:exon19:c.G1269A:p.P423P,CAMK2B:NM_172078:exon20:c.G1419A:p.P473P,CAMK2B:NM_001220:exon23:c.G1791A:p.P597P	exonic	ENSG00000058404	NA	synonymous SNV	ENSG00000058404:ENST00000425809:exon4:c.G345A:p.P115P,ENSG00000058404:ENST00000346990:exon15:c.G1140A:p.P380P,ENSG00000058404:ENST00000353625:exon17:c.G1230A:p.P410P,ENSG00000058404:ENST00000358707:exon18:c.G1302A:p.P434P,ENSG00000058404:ENST00000258682:exon19:c.G1344A:p.P448P,ENSG00000058404:ENST00000347193:exon19:c.G1269A:p.P423P,ENSG00000058404:ENST00000395747:exon19:c.G1347A:p.P449P,ENSG00000058404:ENST00000457475:exon19:c.G1347A:p.P449P,ENSG00000058404:ENST00000350811:exon20:c.G1419A:p.P473P,ENSG00000058404:ENST00000440254:exon20:c.G1419A:p.P473P,ENSG00000058404:ENST00000395749:exon23:c.G1791A:p.P597P	Score=572;Name=lod=282	Name=Metabolic syndrome	7p13	Score=764;Name=V$PAX5_02	Name=NRSF	NA	NA	rs1127065	0.35	0.35	0.329	0.341653	0.4076	0.3998	0.3213	0.1694	0.4611	0.42	0.4	0.33	0.19	0.4064	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.617115	1.617115	NA	0.427093	0.227871	ID=COSM453109;OCCURENCE=1(breast)	0.275	NA	8.4255736
810	20	48522330	48522330	G	A	exonic	SPATA2	NA	synonymous SNV	SPATA2:NM_001135773:exon3:c.C1389T:p.C463C,SPATA2:NM_006038:exon3:c.C1389T:p.C463C	exonic	ENSG00000158480	NA	synonymous SNV	ENSG00000158480:ENST00000543716:exon2:c.C978T:p.C326C,ENSG00000158480:ENST00000289431:exon3:c.C1389T:p.C463C,ENSG00000158480:ENST00000422556:exon3:c.C1389T:p.C463C	Score=488;Name=lod=128	Name=Psoriasis	20q13.13	Score=743;Name=V$MYOGNF1_01	NA	Name=5	NA	rs495337	0.33	0.33	0.267	0.358027	0.3976	0.3403	0.464	0.0991	0.6104	0.41	0.35	0.43	0.11	0.4312	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.042319	NA	NA	0.412907	0.136632	NA	0.283	NA	8.4249596
810	18	13069782	13069782	C	T	exonic	CEP192	NA	nonsynonymous SNV	CEP192:NM_032142:exon27:c.C5101T:p.L1701F	exonic	ENSG00000101639	NA	nonsynonymous SNV	ENSG00000101639:ENST00000430049:exon17:c.C3676T:p.L1226F,ENSG00000101639:ENST00000510237:exon18:c.C3901T:p.L1301F,ENSG00000101639:ENST00000325971:exon25:c.C3313T:p.L1105F,ENSG00000101639:ENST00000506447:exon27:c.C5101T:p.L1701F	Score=458;Name=lod=97	NA	18p11.21	NA	NA	NA	NA	rs6505780	0.75	0.75	0.784	0.770168	0.6193	0.8105	0.6455	0.9486	0.7311	0.62	0.81	0.66	0.94	0.6697	0.94	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-1.745	N	0.96	T	-0.955	T	0.000	T	0.057	-0.382	2.206	5.47	0.927	2.323	10.456	-0.3818	NA	NA	0.619651	0.881979	NA	0.703	NA	8.4246824
810	17	19232078	19232078	T	C	exonic	EPN2	NA	nonsynonymous SNV	EPN2:NM_001102664:exon5:c.T347C:p.V116A,EPN2:NM_148921:exon7:c.T1031C:p.V344A,EPN2:NM_014964:exon8:c.T1202C:p.V401A	exonic	ENSG00000072134	NA	nonsynonymous SNV	ENSG00000072134:ENST00000395618:exon5:c.T347C:p.V116A,ENSG00000072134:ENST00000395620:exon5:c.T1031C:p.V344A,ENSG00000072134:ENST00000494192:exon5:c.T329C:p.V110A,ENSG00000072134:ENST00000571254:exon5:c.T1010C:p.V337A,ENSG00000072134:ENST00000575595:exon5:c.T326C:p.V109A,ENSG00000072134:ENST00000395626:exon6:c.T1202C:p.V401A,ENSG00000072134:ENST00000347697:exon7:c.T1031C:p.V344A,ENSG00000072134:ENST00000395628:exon7:c.T1031C:p.V344A,ENSG00000072134:ENST00000314728:exon8:c.T1202C:p.V401A	Score=243;Name=lod=13	NA	17p11.2	Score=812;Name=V$GRE_C	NA	NA	NA	rs6587220	0.95	0.95	0.963	0.903355	0.994	0.8542	0.8746	0.9992	0.7515	0.99	0.87	0.89	1	0.9276	1	0.55	T	0.0	B	0.0	B	0.417	N	1.000	P	-0.695	N	2.56	T	-0.983	T	0.000	T	0.191	0.307	5.665	3.11	0.266	2.215	11.127	0.307242	NA	0.28	0.988256	0.992964	NA	0.978	NA	8.4234774
810	11	116662331	116662331	G	T	exonic	APOA5	NA	synonymous SNV	APOA5:NM_001166598:exon3:c.C132A:p.I44I,APOA5:NM_052968:exon3:c.C132A:p.I44I	exonic	ENSG00000110243	NA	synonymous SNV	ENSG00000110243:ENST00000227665:exon2:c.C132A:p.I44I,ENSG00000110243:ENST00000433069:exon3:c.C132A:p.I44I,ENSG00000110243:ENST00000542499:exon3:c.C132A:p.I44I	Score=376;Name=lod=45	NA	11q23.3	NA	Name=Pol2,TAF1,ZNF263	Name=2	NA	rs12287066	0.07	0.07	0.063	0.090655	0.0676	NA	0.1369	0.1899	0.0409	0.06	NA	0.1	0.16	0.1097	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.231752	NA	NA	0.067621	0.170305	NA	0.065	NA	8.4217456
810	1	54060016	54060016	G	C	exonic	GLIS1	NA	nonsynonymous SNV	GLIS1:NM_147193:exon3:c.C560G:p.A187G	exonic	ENSG00000174332	NA	nonsynonymous SNV	ENSG00000174332:ENST00000312233:exon3:c.C560G:p.A187G	NA	NA	1p32.3	NA	Name=SMC3_(ab9263),CTCF_(SC-5916),CTCF,TBP,Rad21	Name=24	NA	rs35227000	0.22	0.22	0.248	0.213658	0.2962	0.1885	0.1643	0.1104	0.3292	0.3	0.2	0.19	0.13	0.2893	0.33	0.36	T	0.0	B	0.001	B	0.336	N	1.000	P	0.895	L	2.83	T	-0.904	T	0.000	T	0.064	0.958	8.908	-1.17	-0.010	0.042	5.974	0.958011	NA	NA	0.327324	0.125114	NA	0.138	NA	8.4205094
810	12	40713901	40713901	T	A	exonic	LRRK2	NA	nonsynonymous SNV	LRRK2:NM_198578:exon34:c.T4939A:p.S1647T	exonic	ENSG00000188906	NA	nonsynonymous SNV	ENSG00000188906:ENST00000298910:exon34:c.T4939A:p.S1647T	Score=685;Name=lod=811	NA	12q12	NA	NA	NA	NA	rs11564148	0.28	0.28	0.253	0.285942	0.3171	0.3373	0.2349	0.174	0.3885	0.33	0.33	0.23	0.17	0.2983	0.33	0.62	T	0.0	B	0.0	B	0.209	N	0.000	P	0.6	N	-0.61	T	-1.033	T	0.000	T	0.17	0.926	8.769	0.447	-0.154	0.833	2.541	0.925573	NA	1	0.298068	0.178945	NA	0.109	CLINSIG=unknown;CLNDBN=Parkinson_disease_8\x2c_autosomal_dominant;CLNREVSTAT=single;CLNACC=RCV000032475.1;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet;CLNDSDBID=NBK1208:C1846862:607060:ORPHA2828	8.4198654
810	11	28134974	28134974	C	A	exonic	METTL15	NA	nonsynonymous SNV	METTL15:NM_001113528:exon3:c.C93A:p.N31K,METTL15:NM_152636:exon3:c.C93A:p.N31K	exonic	ENSG00000169519	NA	nonsynonymous SNV	ENSG00000169519:ENST00000303459:exon2:c.C93A:p.N31K,ENSG00000169519:ENST00000379199:exon2:c.C93A:p.N31K,ENSG00000169519:ENST00000437814:exon2:c.C93A:p.N31K,ENSG00000169519:ENST00000342303:exon3:c.C93A:p.N31K,ENSG00000169519:ENST00000403099:exon3:c.C93A:p.N31K,ENSG00000169519:ENST00000406787:exon3:c.C93A:p.N31K,ENSG00000169519:ENST00000407364:exon3:c.C93A:p.N31K,ENSG00000169519:ENST00000451385:exon3:c.C93A:p.N31K	NA	NA	11p14.1	NA	NA	NA	NA	rs11553132	0.53	0.53	0.521	0.604034	0.4364	0.756	0.3905	0.764	0.5552	0.38	0.7	0.36	0.67	0.4775	0.7	1	T	0.0	B	0.0	B	0.043	N	1.000	P	.	.	2.1	T	-1.002	T	0.000	T	0.028	-2.406	0.003	-3.88	-1.457	0.395	7.620	-2.405788	NA	1	NA	NA	NA	0.565	NA	8.4194334
810	6	90340446	90340446	C	T	exonic	ANKRD6	NA	nonsynonymous SNV	ANKRD6:NM_001242814:exon13:c.C1715T:p.P572L,ANKRD6:NM_001242813:exon15:c.C1802T:p.P601L,ANKRD6:NM_001242809:exon16:c.C1907T:p.P636L,ANKRD6:NM_001242811:exon16:c.C1907T:p.P636L,ANKRD6:NM_014942:exon16:c.C1892T:p.P631L	exonic	ENSG00000135299	NA	nonsynonymous SNV	ENSG00000135299:ENST00000520793:exon13:c.C1715T:p.P572L,ENSG00000135299:ENST00000369408:exon15:c.C1802T:p.P601L,ENSG00000135299:ENST00000339746:exon16:c.C1907T:p.P636L,ENSG00000135299:ENST00000447838:exon16:c.C1892T:p.P631L,ENSG00000135299:ENST00000522441:exon16:c.C1907T:p.P636L	NA	NA	6q15	NA	NA	NA	NA	rs61739327	0.08	0.08	0.068	0.0888578	0.1551	0.0476	0.0865	0.0053	0.1779	0.14	0.04	0.07	0.01	0.1202	0.14	0.15	T	0.808	P	0.394	B	0.107	N	1.000	P	1.39	L	1.16	T	-1.034	T	0.112	T	0.146	0.675	7.613	1.64	0.668	1.040	7.707	0.675206	NA	0.03	0.139224	0.02424	NA	0.123	NA	8.4188094
810	4	69681848	69681848	T	C	exonic	UGT2B10	NA	synonymous SNV	UGT2B10:NM_001075:exon1:c.T111C:p.N37N,UGT2B10:NM_001144767:exon1:c.T111C:p.N37N	exonic	ENSG00000109181	NA	synonymous SNV	ENSG00000109181:ENST00000265403:exon1:c.T111C:p.N37N,ENSG00000109181:ENST00000458688:exon1:c.T111C:p.N37N	Score=389;Name=lod=51	NA	4q13.2	NA	Name=FOXA2_(SC-6554),HEY1,TBP,SP1,TCF4	Name=5	NA	rs61749966	0.05	0.05	0.05	0.0439297	0.0915	0.001	0.072	0.0356	0.0307	0.1	NA	0.07	0.03	0.0655	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.011318	NA	NA	0.091713	0.041761	NA	0.109	NA	8.4179536
810	16	30518041	30518041	G	C	exonic	ITGAL	NA	nonsynonymous SNV	ITGAL:NM_001114380:exon19:c.G2120C:p.R707T,ITGAL:NM_002209:exon21:c.G2372C:p.R791T	exonic	ENSG00000005844	NA	nonsynonymous SNV	ENSG00000005844:ENST00000568926:exon4:c.G276C:p.Q92H,ENSG00000005844:ENST00000358164:exon19:c.G2120C:p.R707T,ENSG00000005844:ENST00000356798:exon21:c.G2372C:p.R791T	NA	NA	16p11.2	NA	NA	NA	NA	rs2230433	0.25	0.25	0.281	0.364018	0.3012	0.1339	0.1888	0.4206	0.7137	0.29	0.09	0.2	0.41	0.3254	0.42	0.29	T	0.001	B	0.002	B	0.357	N	1.000	P	1.245	L	0.97	T	-1.030	T	0.000	T	0.035	3.308	17.12	-10.4	-1.940	-1.370	6.162	3.307785	3.307785	0.07	0.290465	0.415794	ID=COSM148068;OCCURENCE=1(stomach)	0.319	NA	8.4162684
810	16	55562466	55562466	G	A	exonic	LPCAT2	NA	nonsynonymous SNV	LPCAT2:NM_017839:exon3:c.G489A:p.M163I	exonic	ENSG00000087253	NA	nonsynonymous SNV	ENSG00000087253:ENST00000262134:exon3:c.G489A:p.M163I	NA	NA	16q12.2	NA	NA	NA	NA	rs837550	0.52	0.52	0.512	0.517772	0.6461	0.4296	0.621	0.3389	0.6452	0.66	0.44	0.6	0.34	0.619	0.66	1	T	0.0	B	0.001	B	0.077	N	1.000	P	-1.105	N	-3.13	D	-1.001	T	0.000	T	0.183	-1.748	0.01	-3.8	-0.392	-1.098	7.519	-1.747828	NA	1	0.652674	0.382848	NA	0.449	NA	8.4155594
811	21	22881251	22881251	A	G	exonic	NCAM2	NA	synonymous SNV	NCAM2:NM_004540:exon16:c.A2157G:p.T719T	exonic	ENSG00000154654	NA	synonymous SNV	ENSG00000154654:ENST00000284894:exon13:c.A1731G:p.T577T,ENSG00000154654:ENST00000400546:exon16:c.A2157G:p.T719T	Score=436;Name=lod=79	NA	21q21.1	Score=869;Name=V$CREBP1_Q2	Name=GATA3_(SC-268)	NA	NA	rs2017705	0.15	0.15	0.145	0.180112	0.0557	0.1111	0.1484	0.3132	0.2219	0.06	0.12	0.16	0.34	0.127	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.347582	1.347582	NA	0.069885	0.275253	NA	0.152	NA	8.4140816
811	20	62038277	62038277	T	G	exonic	KCNQ2	NA	nonsynonymous SNV	KCNQ2:NM_004518:exon15:c.A2255C:p.N752T,KCNQ2:NM_172106:exon16:c.A2285C:p.N762T,KCNQ2:NM_172108:exon16:c.A2246C:p.N749T,KCNQ2:NM_172107:exon17:c.A2339C:p.N780T	exonic	ENSG00000075043	NA	nonsynonymous SNV	ENSG00000075043:ENST00000360480:exon15:c.A2255C:p.N752T,ENSG00000075043:ENST00000344462:exon16:c.A2327C:p.N776T,ENSG00000075043:ENST00000357249:exon16:c.A2285C:p.N762T,ENSG00000075043:ENST00000370224:exon16:c.A2363C:p.N788T,ENSG00000075043:ENST00000370226:exon16:c.A2249C:p.N750T,ENSG00000075043:ENST00000430658:exon16:c.A2246C:p.N749T,ENSG00000075043:ENST00000354587:exon17:c.A2363C:p.N788T,ENSG00000075043:ENST00000359125:exon17:c.A2339C:p.N780T,ENSG00000075043:ENST00000359689:exon18:c.A2339C:p.N780T	Score=539;Name=lod=207	NA	20q13.33	NA	NA	NA	NA	rs1801475	0.59	0.59	0.54	0.590455	0.6382	0.6687	0.5519	0.4629	0.6605	0.65	0.63	0.57	0.46	0.6372	0.65	0.38	T	0.0	B	0.0	B	0.021	N	0.000	P	0	N	0.96	T	-0.956	T	0.000	T	0.013	-0.249	2.801	0.092	-0.549	1.872	7.214	-0.24908	NA	0.28	0.643872	0.509853	NA	0.58	CLINSIG=non-pathogenic|non-pathogenic|non-pathogenic;CLNDBN=Benign_familial_neonatal_seizures_1|not_specified|not_provided;CLNREVSTAT=single|mult|single;CLNACC=RCV000020987.1|RCV000082686.2|RCV000126472.1;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet|.|.;CLNDSDBID=NBK32534:C1852587:121200:ORPHA1949|.|.	8.4140614
811	6	53989526	53989526	G	A	exonic	MLIP	NA	nonsynonymous SNV	MLIP:NM_138569:exon3:c.G475A:p.V159I	exonic	ENSG00000146147	NA	nonsynonymous SNV	ENSG00000146147:ENST00000370876:exon2:c.G289A:p.V97I,ENSG00000146147:ENST00000370877:exon2:c.G319A:p.V107I,ENSG00000146147:ENST00000503951:exon2:c.G352A:p.V118I,ENSG00000146147:ENST00000509997:exon2:c.G319A:p.V107I,ENSG00000146147:ENST00000274897:exon3:c.G475A:p.V159I,ENSG00000146147:ENST00000358276:exon3:c.G457A:p.V153I,ENSG00000146147:ENST00000447836:exon3:c.G121A:p.V41I,ENSG00000146147:ENST00000502396:exon3:c.G508A:p.V170I,ENSG00000146147:ENST00000511678:exon3:c.G121A:p.V41I,ENSG00000146147:ENST00000514433:exon3:c.G478A:p.V160I,ENSG00000146147:ENST00000514921:exon3:c.G475A:p.V159I	NA	NA	6p12.1	Score=806;Name=V$PPARG_03	NA	NA	NA	rs4712056	0.61	0.61	0.622	0.615615	0.6491	0.7331	0.5115	0.4667	0.7352	0.65	0.73	0.52	0.45	0.6302	0.73	.	.	0.187	B	0.037	B	0.396	N	1.000	P	0.69	N	1.4	T	-1.053	T	0.014	T	0.194	0.629	7.384	-7.97	-1.268	-0.711	1.127	0.629414	NA	0.33	0.640116	0.501816	NA	0.667	NA	8.4139174
811	17	76497920	76497920	C	A	exonic	DNAH17	NA	nonsynonymous SNV	DNAH17:NM_173628:exon34:c.G5226T:p.M1742I	exonic	ENSG00000187775	NA	nonsynonymous SNV	ENSG00000187775:ENST00000389840:exon34:c.G5193T:p.M1731I,ENSG00000187775:ENST00000585328:exon34:c.G5217T:p.M1739I	Score=383;Name=lod=48	NA	17q25.3	NA	NA	NA	NA	rs690844	0.74	0.74	0.713	0.738818	0.6213	0.9435	0.7608	0.6823	0.7096	0.63	0.94	0.71	0.68	0.6823	0.94	0.58	T	.	.	.	.	.	.	0.988	P	.	.	1.96	T	-1.025	T	0.000	T	0.021	0.098	4.531	-2.49	-0.505	-1.454	6.363	0.098492	NA	0.28	0.616309	0.695155	NA	0.79	NA	8.4134244
811	15	99678257	99678257	G	A	exonic	TTC23	NA	synonymous SNV	TTC23:NM_001040656:exon11:c.C1302T:p.D434D,TTC23:NM_001040659:exon11:c.C1302T:p.D434D,TTC23:NM_001040657:exon12:c.C1302T:p.D434D,TTC23:NM_001040658:exon12:c.C1302T:p.D434D,TTC23:NM_001040660:exon12:c.C1302T:p.D434D,TTC23:NM_001040655:exon13:c.C1302T:p.D434D,TTC23:NM_022905:exon13:c.C1302T:p.D434D	exonic	ENSG00000103852	NA	synonymous SNV	ENSG00000103852:ENST00000558613:exon11:c.C1302T:p.D434D,ENSG00000103852:ENST00000262074:exon12:c.C1302T:p.D434D,ENSG00000103852:ENST00000394135:exon12:c.C1302T:p.D434D,ENSG00000103852:ENST00000558663:exon12:c.C1302T:p.D434D,ENSG00000103852:ENST00000394136:exon13:c.C1302T:p.D434D,ENSG00000103852:ENST00000394132:exon14:c.C1302T:p.D434D	NA	NA	15q26.3	NA	NA	NA	NA	rs28617660	0.13	0.13	0.143	0.144569	0.0805	0.0486	0.0677	0.348	0.089	0.09	0.05	0.06	0.33	0.0949	0.33	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.979	T	0.000	T	.	0.508	6.755	2.89	0.540	1.861	7.434	0.508122	NA	NA	0.077993	0.292175	NA	0.087	NA	8.4132736
811	17	45364540	45364540	T	C	exonic	ITGB3	NA	synonymous SNV	ITGB3:NM_000212:exon6:c.T882C:p.P294P	exonic	ENSG00000259207,ENSG00000259753	NA	synonymous SNV	ENSG00000259207:ENST00000435993:exon6:c.T741C:p.P247P,ENSG00000259207:ENST00000559488:exon6:c.T882C:p.P294P,ENSG00000259207:ENST00000571680:exon6:c.T882C:p.P294P	Score=566;Name=lod=267	NA	17q21.32	NA	Name=CTCF_(C-20),Rad21,EBF1_(C-8),CTCF,IRF4_(M-17)	Name=6	NA	rs5919	0.13	0.13	0.117	0.14397	0.0765	0.2262	0.0908	0.1498	0.1585	0.06	0.24	0.11	0.14	0.1029	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.428952	1.428952	NA	0.074535	0.144349	NA	0.109	NA	8.4127316
811	6	27425185	27425185	C	A	exonic	ZNF184	NA	nonsynonymous SNV	ZNF184:NM_007149:exon4:c.G79T:p.A27S	exonic	ENSG00000096654	NA	nonsynonymous SNV	ENSG00000096654:ENST00000211936:exon4:c.G79T:p.A27S,ENSG00000096654:ENST00000377419:exon4:c.G79T:p.A27S	Score=498;Name=lod=141	NA	6p22.1	NA	NA	NA	NA	rs1883216	0.59	0.59	0.586	0.618211	0.6451	0.5774	0.6715	0.531	0.7127	0.64	0.55	0.65	0.51	0.6415	0.65	1	T	0.0	B	0.0	B	0.001	N	1.000	P	-1.28	N	5.77	T	-1.039	T	0.000	T	0.065	-0.248	2.806	3.17	0.449	1.456	3.768	-0.248095	NA	0.69	0.634186	0.534498	NA	0.565	NA	8.4125474
811	6	116575116	116575116	G	T	exonic	TSPYL4	NA	nonsynonymous SNV	TSPYL4:NM_021648:exon1:c.C56A:p.A19D	exonic	ENSG00000187189	NA	nonsynonymous SNV	ENSG00000187189:ENST00000420283:exon1:c.C56A:p.A19D	NA	NA	6q22.1	NA	Name=POU2F2,SREBP1,Pol2-4H8,Sin3Ak-20,Pol2(phosphoS2),Pol2,Oct-2,ELF1_(SC-631)	NA	NA	rs17524614	0.13	0.13	0.083	0.101637	0.1501	0.1101	0.2089	0.0106	0.09	0.16	0.12	0.2	0.02	0.1489	0.2	0.07	T	0.779	P	0.235	B	.	.	1.000	P	1.735	L	1.72	T	-1.048	T	0.021	T	0.067	1.911	12.35	1.34	0.285	0.137	4.128	1.911171	1.911171	0.07	0.122735	0.027411	NA	0.051	NA	8.4115984
811	5	135287029	135287029	T	C	exonic	LECT2	NA	nonsynonymous SNV	LECT2:NM_002302:exon3:c.A172G:p.I58V	exonic	ENSG00000145826	NA	nonsynonymous SNV	ENSG00000145826:ENST00000274507:exon3:c.A172G:p.I58V,ENSG00000145826:ENST00000514447:exon3:c.A172G:p.I58V,ENSG00000145826:ENST00000522943:exon3:c.A172G:p.I58V	Score=363;Name=lod=40	NA	5q31.1	NA	Name=GR	NA	NA	rs31517	0.63	0.63	0.585	0.636382	0.6412	0.6478	0.696	0.5484	0.6963	0.65	0.63	0.67	0.56	0.6445	0.67	1	T	0.0	B	0.001	B	0.002	N	0.000	P	-0.63	N	0.61	T	-0.904	T	0.000	T	0.061	0.413	6.245	3.33	-0.028	0.461	12.606	0.413265	NA	0.62	0.636279	0.578756	ID=COSM1130934;OCCURENCE=1(prostate)	0.5	NA	8.4113544
811	10	18266989	18266989	G	A	exonic	SLC39A12	NA	nonsynonymous SNV	SLC39A12:NM_001145195:exon5:c.G910A:p.V304I,SLC39A12:NM_152725:exon5:c.G910A:p.V304I	exonic	ENSG00000148482	NA	nonsynonymous SNV	ENSG00000148482:ENST00000539911:exon4:c.G508A:p.V170I,ENSG00000148482:ENST00000377369:exon5:c.G910A:p.V304I,ENSG00000148482:ENST00000377371:exon5:c.G910A:p.V304I,ENSG00000148482:ENST00000377374:exon5:c.G910A:p.V304I	NA	NA	10p12.33	NA	NA	NA	NA	rs2478568	0.66	0.66	0.651	0.664736	0.6322	0.6627	0.6888	0.6195	0.7444	0.63	0.68	0.69	0.64	0.6587	0.69	0.21	T	0.0	B	0.001	B	0.000	N	1.000	P	-0.51	N	0.22	T	-1.005	T	0.000	T	0.063	-0.226	2.906	-9.43	-3.949	-4.098	5.160	-0.22635	NA	0.51	0.631512	0.625965	NA	0.652	NA	8.4109214
811	2	15674686	15674686	T	C	exonic	NBAS	NA	nonsynonymous SNV	NBAS:NM_015909:exon9:c.A727G:p.I243V	exonic	ENSG00000151779	NA	nonsynonymous SNV	ENSG00000151779:ENST00000281513:exon9:c.A727G:p.I243V,ENSG00000151779:ENST00000441750:exon9:c.A727G:p.I243V	NA	NA	2p24.3	Score=843;Name=V$CHX10_01	NA	NA	NA	rs13029846	0.42	0.42	0.399	0.389177	0.6879	0.1617	0.5807	0.2088	0.4243	0.67	0.18	0.58	0.18	0.5553	0.68	0	D	0.001	B	0.002	B	0.015	N	0.946	P	0.665	N	0.9	T	-0.931	T	0.000	T	0.029	-0.336	2.406	-4.29	-0.749	-0.116	9.352	-0.336426	NA	0.47	0.681047	0.297322	NA	0.514	NA	8.4090864
811	15	90335788	90335788	C	T	exonic	ANPEP	NA	nonsynonymous SNV	ANPEP:NM_001150:exon17:c.G2255A:p.S752N	exonic	ENSG00000166825	NA	nonsynonymous SNV	ENSG00000166825:ENST00000300060:exon17:c.G2255A:p.S752N	NA	NA	15q26.1	NA	NA	NA	NA	rs25651	0.32	0.32	0.335	0.350639	0.2962	0.2331	0.2622	0.5144	0.3691	0.29	0.25	0.26	0.47	0.3099	0.49	0.39	T	0.0	B	0.001	B	0.070	N	1.000	P	-0.89	N	3.43	T	-0.926	T	0.000	T	0.012	-1.901	0.008	-4.38	-1.792	-0.012	14.257	-1.901246	NA	1	0.31833	0.486818	NA	0.435	NA	8.4089034
811	7	20826452	20826452	T	G	UTR5	SP8	NM_182700:c.-35A>C,NM_198956:c.-1071A>C	NA	NA	UTR5	ENSG00000164651	ENST00000361443:c.-1071A>C,ENST00000418710:c.-35A>C	NA	NA	Score=784;Name=lod=2038	NA	7p21.1	Score=872;Name=V$TATA_01	Name=TCF4,HMGN3	Name=56	Score=90;Name=2155718_0_-_90	rs34863300	0.28	0.28	0.24	0.280351	0.2962	0.3938	0.3876	0.0877	0.3313	0.29	0.38	0.38	0.06	0.3304	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.490353	2.490353	NA	0.298949	0.122043	NA	0.261	NA	8.4077844
811	11	119216504	119216504	C	T	exonic	MFRP	NA	nonsynonymous SNV	MFRP:NM_031433:exon4:c.G406A:p.V136M	exonic	ENSG00000235718,ENSG00000259159	NA	nonsynonymous SNV	ENSG00000235718:ENST00000360167:exon4:c.G406A:p.V136M,ENSG00000235718:ENST00000449574:exon4:c.G406A:p.V136M,ENSG00000259159:ENST00000530681:exon4:c.G406A:p.V136M,ENSG00000235718:ENST00000555262:exon4:c.G406A:p.V136M	NA	NA	11q23.3	NA	NA	NA	NA	rs3814762	0.21	0.21	0.205	0.182109	0.337	0.2004	0.1657	0.0393	0.2086	0.33	0.19	0.22	0.05	0.2664	0.33	0.22	T	0.079	B	0.009	B	0.132	N	1.000	P	-0.625	N	1.83	T	-0.994	T	0.000	T	0.062	0.623	7.352	-3.06	-0.646	-1.868	6.357	0.623059	NA	0.18	0.322584	0.097544	NA	0.159	NA	8.4073494
811	6	116973182	116973182	T	C	exonic	ZUFSP	NA	nonsynonymous SNV	ZUFSP:NM_145062:exon6:c.A1135G:p.N379D	exonic	ENSG00000153975	NA	nonsynonymous SNV	ENSG00000153975:ENST00000368576:exon6:c.A1135G:p.N379D	Score=428;Name=lod=73	NA	6q22.1	NA	NA	Name=4	NA	rs4946188	0.37	0.37	0.373	0.405351	0.2932	0.3056	0.4928	0.5076	0.4233	0.3	0.3	0.45	0.49	0.3535	0.49	0.75	T	0.0	B	0.002	B	0.089	N	0.995	P	0.55	N	1.0	T	-0.989	T	0.018	T	0.002	-0.158	3.231	1.52	0.108	0.628	5.323	-0.157533	NA	0.75	0.279535	0.473899	ID=COSM450386;OCCURENCE=1(breast)	0.457	NA	8.4070984
811	2	73828538	73828538	G	A	exonic	ALMS1	NA	nonsynonymous SNV	ALMS1:NM_015120:exon19:c.G12086A:p.R4029K	exonic	ENSG00000116127	NA	nonsynonymous SNV	ENSG00000116127:ENST00000409009:exon18:c.G11960A:p.R3987K,ENSG00000116127:ENST00000264448:exon19:c.G12086A:p.R4029K	NA	NA	2p13.1	NA	NA	NA	NA	rs1052161	0.58	0.58	0.522	0.582268	0.6561	0.7599	0.7061	0.2466	0.6892	0.64	0.72	0.7	0.25	0.6334	0.72	1	T	0.001	B	0.002	B	0.659	N	1.000	P	-0.695	N	3.46	T	-0.967	T	0.000	T	0.05	-0.231	2.887	-6.29	-2.132	-1.799	12.942	-0.23057	NA	0.5	0.637093	0.3403	NA	0.5	NA	8.4067404
811	16	4796393	4796393	A	G	exonic	C16orf71	NA	nonsynonymous SNV	C16orf71:NM_139170:exon7:c.A1061G:p.Q354R	exonic	ENSG00000166246	NA	nonsynonymous SNV	ENSG00000166246:ENST00000299320:exon7:c.A1061G:p.Q354R,ENSG00000166246:ENST00000590191:exon7:c.A1103G:p.Q368R	NA	NA	16p13.3	NA	NA	NA	NA	rs737700	0.62	0.62	0.598	0.565895	0.6481	0.6786	0.5692	0.4682	0.4949	0.65	0.71	0.56	0.51	0.6185	0.71	0.45	T	0.0	B	0.0	B	0.081	N	1.000	P	0	N	3.32	T	-0.996	T	0.000	T	0.007	-1.228	0.059	-6.6	-2.323	-1.218	3.002	-1.227684	NA	0.79	0.660581	0.525262	ID=COSM435288;OCCURENCE=1(breast)	0.594	NA	8.4061524
811	22	38130459	38130459	G	T	exonic	TRIOBP	NA	nonsynonymous SNV	TRIOBP:NM_001039141:exon9:c.G4116T:p.E1372D	exonic	ENSG00000100106	NA	nonsynonymous SNV	ENSG00000100106:ENST00000406386:exon9:c.G4116T:p.E1372D	NA	NA	22q13.1	NA	Name=TCF4	NA	NA	rs8140207	0.27	0.27	0.261	0.263978	0.3241	0.3016	0.2968	0.0401	0.4427	0.33	0.35	0.3	0.05	0.308	0.35	0.4	T	0.051	B	0.02	B	.	.	1.000	P	0.695	N	1.61	T	-0.917	T	0.000	T	0.04	1.497	10.95	0.937	0.228	-0.109	3.171	1.496753	1.496753	0.46	0.295499	0.075874	NA	0.239	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000036821.1;CLNDSDB=.;CLNDSDBID=.	8.4057344
812	7	4874420	4874420	G	C	exonic	RADIL	NA	nonsynonymous SNV	RADIL:NM_018059:exon4:c.C1234G:p.H412D	exonic	ENSG00000157927	NA	nonsynonymous SNV	ENSG00000157927:ENST00000538469:exon3:c.C514G:p.H172D,ENSG00000157927:ENST00000399583:exon4:c.C1234G:p.H412D,ENSG00000157927:ENST00000536091:exon4:c.C1234G:p.H412D	NA	NA	7p22.1	NA	NA	NA	NA	rs2292498	0.24	0.24	0.203	0.251398	0.2873	0.3294	0.2853	0.0401	0.3957	0.28	0.34	0.26	0.04	0.3411	0.34	0.64	T	0.0	B	0.0	B	0.147	N	1.000	P	-1.59	N	3.45	T	-0.940	T	0.000	T	0.093	-1.905	0.008	2.56	0.291	1.196	8.185	-1.905182	NA	0.61	0.302594	0.074304	NA	0.087	NA	8.4023394
812	15	60803741	60803741	C	T	exonic	RORA	NA	synonymous SNV	RORA:NM_134262:exon4:c.G339A:p.Q113Q,RORA:NM_002943:exon5:c.G579A:p.Q193Q,RORA:NM_134261:exon5:c.G504A:p.Q168Q,RORA:NM_134260:exon6:c.G603A:p.Q201Q	exonic	ENSG00000069667	NA	synonymous SNV	ENSG00000069667:ENST00000449337:exon4:c.G339A:p.Q113Q,ENSG00000069667:ENST00000309157:exon5:c.G579A:p.Q193Q,ENSG00000069667:ENST00000335670:exon5:c.G504A:p.Q168Q,ENSG00000069667:ENST00000261523:exon6:c.G603A:p.Q201Q	Score=569;Name=lod=274	NA	15q22.2	Score=710;Name=V$NRSF_01	NA	Name=17	NA	rs61740274	0.05	0.05	0.05	0.04373	0.0865	NA	0.0634	0.0363	0.0409	0.09	NA	0.06	0.04	0.0757	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.092094	NA	NA	0.103256	0.051067	NA	0.036	NA	8.4012106
812	14	91681888	91681888	G	A	exonic	C14orf159	NA	synonymous SNV	C14orf159:NM_001102368:exon13:c.G1704A:p.P568P,C14orf159:NM_024952:exon13:c.G1689A:p.P563P,C14orf159:NM_001102367:exon14:c.G1689A:p.P563P,C14orf159:NM_001102369:exon14:c.G1533A:p.P511P,C14orf159:NM_001102366:exon15:c.G1689A:p.P563P	exonic	ENSG00000133943	NA	synonymous SNV	ENSG00000133943:ENST00000256324:exon13:c.G1704A:p.P568P,ENSG00000133943:ENST00000428926:exon13:c.G1689A:p.P563P,ENSG00000133943:ENST00000523771:exon13:c.G1689A:p.P563P,ENSG00000133943:ENST00000412671:exon14:c.G1704A:p.P568P,ENSG00000133943:ENST00000520328:exon14:c.G1533A:p.P511P,ENSG00000133943:ENST00000521077:exon14:c.G1584A:p.P528P,ENSG00000133943:ENST00000522322:exon14:c.G1689A:p.P563P,ENSG00000133943:ENST00000525393:exon14:c.G1317A:p.P439P,ENSG00000133943:ENST00000523816:exon15:c.G1689A:p.P563P,ENSG00000133943:ENST00000518868:exon16:c.G1704A:p.P568P	NA	NA	14q32.11	NA	NA	NA	NA	rs34424078	0.07	0.07	0.069	0.0824681	0.0895	0.0516	0.1254	0.0121	0.1718	0.09	0.06	0.1	0.02	0.0922	0.1	.	.	.	.	.	.	.	.	0.947	N	.	.	.	.	-1.060	T	0.001	T	.	0.333	5.806	-10.5	-1.122	-1.710	1.997	0.333064	NA	NA	0.083953	0.029278	NA	0.123	NA	8.4010136
812	2	3469463	3469463	G	C	exonic	TRAPPC12	NA	synonymous SNV	TRAPPC12:NM_016030:exon9:c.G1773C:p.L591L	exonic	ENSG00000171853	NA	synonymous SNV	ENSG00000171853:ENST00000415624:exon4:c.G267C:p.L89L,ENSG00000171853:ENST00000324266:exon9:c.G1773C:p.L591L,ENSG00000171853:ENST00000382110:exon9:c.G1773C:p.L591L	Score=435;Name=lod=78	NA	2p25.3	NA	NA	Name=8	NA	rs4971514	0.43	0.43	0.443	0.415335	0.4473	0.3601	0.3285	0.4826	0.41	0.45	0.37	0.37	0.5	0.4017	0.5	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.990	T	0.000	T	.	2.257	13.5	-10.7	-2.368	-0.650	2.967	2.257146	2.257146	NA	0.416977	0.455288	NA	0.536	NA	8.4006896
812	3	48508585	48508585	C	T	exonic	TREX1	NA	synonymous SNV	TREX1:NM_016381:exon1:c.C696T:p.Y232Y,TREX1:NM_007248:exon2:c.C501T:p.Y167Y,TREX1:NM_033629:exon2:c.C531T:p.Y177Y	exonic	ENSG00000213689	NA	synonymous SNV	ENSG00000213689:ENST00000422277:exon1:c.C696T:p.Y232Y,ENSG00000213689:ENST00000436480:exon2:c.C531T:p.Y177Y,ENSG00000213689:ENST00000444177:exon2:c.C501T:p.Y167Y,ENSG00000213689:ENST00000456089:exon2:c.C114T:p.Y38Y,ENSG00000213689:ENST00000296443:exon3:c.C531T:p.Y177Y,ENSG00000213689:ENST00000433541:exon4:c.C114T:p.Y38Y	Score=407;Name=lod=60	NA	3p21.31	Score=809;Name=V$IRF2_01	Name=Pol2	NA	NA	rs11797	0.33	0.33	0.345	0.313299	0.4433	0.3125	0.2853	0.2383	0.3016	0.43	0.29	0.3	0.24	0.3706	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.78922	NA	NA	0.453837	0.274626	NA	0.435	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000082324.1;CLNDSDB=.;CLNDSDBID=.	8.3989296
812	4	83582211	83582211	C	G	exonic	SCD5	NA	nonsynonymous SNV	SCD5:NM_024906:exon4:c.G589C:p.E197Q	exonic	ENSG00000145284	NA	nonsynonymous SNV	ENSG00000145284:ENST00000273908:exon4:c.G589C:p.E197Q	NA	NA	4q21.22	NA	NA	NA	NA	rs3733227	0.62	0.62	0.612	0.608427	0.6252	0.623	0.7435	0.4887	0.6421	0.63	0.63	0.72	0.49	0.6538	0.72	0.3	T	0.0	B	0.0	B	.	.	0.999	P	.	.	.	.	-0.974	T	0.000	T	0.024	1.673	11.55	3.67	1.153	1.373	9.397	1.67337	1.67337	0.41	0.658256	0.506355	NA	0.58	NA	8.3960774
812	3	171338237	171338237	T	G	exonic	PLD1	NA	synonymous SNV	PLD1:NM_001130081:exon23:c.A2553C:p.V851V,PLD1:NM_002662:exon24:c.A2667C:p.V889V	exonic	ENSG00000075651	NA	synonymous SNV	ENSG00000075651:ENST00000356327:exon23:c.A2553C:p.V851V,ENSG00000075651:ENST00000340989:exon24:c.A2667C:p.V889V,ENSG00000075651:ENST00000351298:exon24:c.A2667C:p.V889V	Score=385;Name=lod=49	NA	3q26.31	NA	NA	NA	NA	rs9881788	0.47	0.47	0.471	0.473243	0.3946	0.3562	0.4669	0.7352	0.3252	0.4	0.33	0.43	0.78	0.4496	0.78	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	-0.664	1.092	4.63	0.704	4.606	10.925	-0.663792	NA	NA	0.426512	0.670449	NA	0.449	NA	8.3959546
812	17	3627840	3627840	G	A	exonic	GSG2	NA	nonsynonymous SNV	GSG2:NM_031965:exon1:c.G611A:p.G204D	exonic	ENSG00000177602	NA	nonsynonymous SNV	ENSG00000177602:ENST00000325418:exon1:c.G611A:p.G204D	NA	NA	17p13.2	NA	NA	Name=16	NA	rs220462	0.23	0.23	0.208	0.257788	0.3101	0.3006	0.1556	0.0356	0.5327	0.31	0.31	0.18	0.04	0.3069	0.32	0	D	0.001	B	0.003	B	0.554	N	1.000	P	0.55	N	3.09	T	-0.904	T	0.000	T	0.009	2.158	13.17	-1.77	-0.416	-0.148	9.767	2.15802	2.15802	0.48	0.321047	0.078529	NA	0.261	NA	8.3952864
812	2	165476253	165476253	A	T	exonic	GRB14	NA	nonsynonymous SNV	GRB14:NM_004490:exon2:c.T268A:p.F90I	exonic	ENSG00000115290	NA	nonsynonymous SNV	ENSG00000115290:ENST00000424693:exon1:c.T94A:p.F32I,ENSG00000115290:ENST00000263915:exon2:c.T268A:p.F90I,ENSG00000115290:ENST00000446413:exon2:c.T133A:p.F45I	Score=542;Name=lod=213	NA	2q24.3	NA	NA	NA	NA	rs61748245	0.5	0.5	0.456	0.443091	0.6769	0.3571	0.7392	0.1838	0.4315	0.68	0.36	0.7	0.22	0.606	0.7	0.43	T	0.022	B	0.027	B	0.002	N	0.000	P	0.69	N	2.02	T	-0.985	T	0.000	T	0.196	1.744	11.79	4.3	0.913	1.690	8.941	1.743698	1.743698	0.27	0.655349	0.267136	NA	0.442	NA	8.3950844
813	7	73814749	73814749	G	C	exonic	CLIP2	NA	nonsynonymous SNV	CLIP2:NM_032421:exon14:c.G2825C:p.R942P,CLIP2:NM_003388:exon15:c.G2930C:p.R977P	exonic	ENSG00000106665	NA	nonsynonymous SNV	ENSG00000106665:ENST00000361545:exon14:c.G2825C:p.R942P,ENSG00000106665:ENST00000395060:exon14:c.G2930C:p.R977P,ENSG00000106665:ENST00000223398:exon15:c.G2930C:p.R977P	Score=473;Name=lod=112	NA	7q11.23	NA	NA	NA	NA	rs2522943	0.99	0.99	0.992	0.988818	0.9811	1	0.9827	0.9985	0.9765	0.99	1	0.98	1	0.9822	1	0.45	T	0.0	B	0.0	B	0.000	N	0.999	P	-0.975	N	0.42	T	-0.964	T	0.000	T	0.383	0.134	4.723	4.72	1.012	5.445	13.814	0.134417	NA	1	0.975116	0.995915	NA	0.978	NA	8.3949174
813	9	125391127	125391127	C	T	exonic	OR1B1	NA	nonsynonymous SNV	OR1B1:NM_001004450:exon1:c.G688A:p.A230T	exonic	ENSG00000171484	NA	nonsynonymous SNV	ENSG00000171484:ENST00000304833:exon1:c.G688A:p.A230T	NA	NA	9q33.2	NA	NA	NA	NA	rs1476859	0.4	0.4	0.36	0.388978	0.2763	0.7917	0.4885	0.0567	0.4683	0.28	0.8	0.43	0.09	0.3638	0.8	0.44	T	0.031	B	0.078	B	0.000	N	1.000	P	-0.015	N	8.59	T	-1.023	T	0.000	T	0.026	-1.212	0.066	3.58	0.398	-1.675	7.375	-1.21178	NA	0.42	0.298837	0.092828	NA	0.283	NA	8.3943964
813	7	150557665	150557665	C	G	exonic	ABP1	NA	nonsynonymous SNV	ABP1:NM_001091:exon4:c.C1933G:p.H645D,ABP1:NM_001272072:exon4:c.C1990G:p.H664D	exonic	ENSG00000002726	NA	nonsynonymous SNV	ENSG00000002726:ENST00000360937:exon4:c.C1933G:p.H645D,ENSG00000002726:ENST00000416793:exon4:c.C1990G:p.H664D,ENSG00000002726:ENST00000467291:exon6:c.C1933G:p.H645D,ENSG00000002726:ENST00000493429:exon6:c.C1933G:p.H645D	Score=555;Name=lod=241	NA	7q36.1	NA	NA	NA	NA	rs1049793	0.42	0.42	0.435	0.453275	0.2694	0.4792	0.3991	0.5446	0.5307	0.28	0.51	0.41	0.54	0.3697	0.54	1	T	0.0	B	0.001	B	0.000	N	0.981	P	-2.48	N	4.11	T	-0.942	T	0.000	T	0.043	-0.633	1.2	3.07	0.521	0.377	13.851	-0.632801	NA	1	0.300308	0.464644	ID=COSM150423;OCCURENCE=1(stomach)	0.486	NA	8.3939254
813	7	93055753	93055753	A	G	exonic	CALCR	NA	nonsynonymous SNV	CALCR:NM_001164738:exon13:c.T1340C:p.L447P,CALCR:NM_001742:exon14:c.T1340C:p.L447P,CALCR:NM_001164737:exon16:c.T1442C:p.L481P	exonic	ENSG00000004948	NA	nonsynonymous SNV	ENSG00000004948:ENST00000394441:exon13:c.T1340C:p.L447P,ENSG00000004948:ENST00000426151:exon14:c.T1340C:p.L447P,ENSG00000004948:ENST00000360249:exon15:c.T1388C:p.L463P,ENSG00000004948:ENST00000421592:exon15:c.T1388C:p.L463P,ENSG00000004948:ENST00000359558:exon16:c.T1442C:p.L481P	NA	NA	7q21.3	NA	NA	NA	NA	rs1801197	0.53	0.53	0.519	0.54353	0.3052	0.8611	0.4308	0.5408	0.545	0.3	0.87	0.43	0.56	0.38	0.87	0.3	T	0.0	B	0.0	B	.	.	1.000	P	.	.	0.91	T	-1.043	T	0.000	T	0.057	-0.925	0.389	1.3	-0.050	1.787	4.697	-0.924704	NA	0.35	0.254302	0.470495	ID=COSM1178514,COSM1178513;OCCURENCE=1(prostate)	0.551	CLINSIG=other;CLNDBN=Bone_mineral_density_quantitative_trait_locus_15;CLNREVSTAT=single;CLNACC=RCV000019203.1;CLNDSDB=MedGen:OMIM;CLNDSDBID=C2677169:613418	8.3938314
813	11	57798723	57798723	A	G	exonic	OR6Q1	NA	nonsynonymous SNV	OR6Q1:NM_001005186:exon1:c.A299G:p.D100G	exonic	ENSG00000172381	NA	nonsynonymous SNV	ENSG00000172381:ENST00000302622:exon1:c.A299G:p.D100G	NA	NA	11q12.1	NA	NA	NA	NA	rs921135	0.38	0.38	0.361	0.408147	0.2913	0.6825	0.2651	0.3238	0.4611	0.28	0.66	0.27	0.31	0.3517	0.66	1	T	0.0	B	0.0	B	0.001	N	0.941	P	-2.225	N	5.23	T	-1.040	T	0.000	T	0.038	-0.832	0.593	3.78	1.036	0.808	7.927	-0.832308	NA	1	0.298534	0.336665	NA	0.326	NA	8.3917994
813	18	14105853	14105853	C	A	exonic	ZNF519	NA	nonsynonymous SNV	ZNF519:NM_145287:exon3:c.G686T:p.R229I	exonic	ENSG00000175322	NA	nonsynonymous SNV	ENSG00000175322:ENST00000590202:exon3:c.G686T:p.R229I	Score=366;Name=lod=41	NA	18p11.21	NA	NA	NA	NA	rs8094412	0.2	0.2	0.183	0.165136	0.1302	0.4454	0.2248	0.0106	0.0787	0.12	0.46	0.19	0.02	0.1596	0.46	0.27	T	0.647	P	0.212	B	.	.	0.000	P	1.225	L	.	.	-0.914	T	0.000	T	0.133	0.437	6.374	-0.517	-0.192	0.122	4.785	0.437165	NA	NA	0.151819	0.033636	NA	0.13	NA	8.3917144
813	19	3179021	3179021	G	A	exonic	S1PR4	NA	synonymous SNV	S1PR4:NM_003775:exon1:c.G231A:p.S77S	exonic	ENSG00000125910	NA	synonymous SNV	ENSG00000125910:ENST00000246115:exon1:c.G231A:p.S77S	Score=538;Name=lod=204	NA	19p13.3	NA	Name=YY1,YY1_(C-20)	Name=12	NA	rs34728133	0.04	0.04	0.04	0.0289537	0.0984	NA	0.0274	0.0008	0.0266	0.1	NA	0.02	0.002	0.0953	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.810238	NA	NA	0.083702	0.014592	NA	0.08	NA	8.3892646
813	13	101287340	101287340	C	T	exonic	TMTC4	NA	nonsynonymous SNV	TMTC4:NM_001079669:exon10:c.G1255A:p.V419I,TMTC4:NM_032813:exon11:c.G1312A:p.V438I	exonic	ENSG00000125247	NA	nonsynonymous SNV	ENSG00000125247:ENST00000328767:exon8:c.G922A:p.V308I,ENSG00000125247:ENST00000376234:exon10:c.G1255A:p.V419I,ENSG00000125247:ENST00000342624:exon11:c.G1312A:p.V438I	NA	NA	13q32.3	NA	NA	NA	NA	rs946837	0.38	0.38	0.367	0.389377	0.3022	0.6052	0.245	0.3805	0.3712	0.3	0.58	0.23	0.41	0.3469	0.58	0.69	T	0.005	B	0.008	B	0.008	N	1.000	P	0.515	N	0.72	T	-0.928	T	0.000	T	0.062	-0.765	0.773	2.4	0.697	1.160	8.902	-0.765192	NA	0.52	0.297791	0.357467	ID=COSM1365194;OCCURENCE=1(large_intestine)	0.377	NA	8.3864424
813	6	26045737	26045737	C	G	exonic	HIST1H3C	NA	synonymous SNV	HIST1H3C:NM_003531:exon1:c.C99G:p.T33T	exonic	ENSG00000196532	NA	synonymous SNV	ENSG00000196532:ENST00000540144:exon1:c.C99G:p.T33T	NA	NA	6p22.2	Score=870;Name=V$E47_01	Name=Pol2(phosphoS2),YY1,Pol2,GCN5,NRSF,Pol2-4H8,YY1_(C-20),Pbx3,BCLAF1_(M33-P5B11),TAF1,SREBP1,GATA-1,Pol2(b),ZBTB33,WHIP,E2F4,POU2F2,p300,GTF2F1_(RAP-74),TBP,ELF1_(SC-631),BCL3,ZEB1_(SC-25388),HEY1,NFKB,SRF,Oct-2	Name=134	NA	rs3752418	0.23	0.23	0.181	0.216853	0.0676	0.5149	0.2695	0.0734	0.2198	0.08	0.56	0.21	0.09	0.1456	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.254466	NA	NA	0.067225	0.090785	NA	0.109	NA	8.3862416
813	18	56202768	56202768	C	A	exonic	ALPK2	NA	nonsynonymous SNV	ALPK2:NM_052947:exon5:c.G4651T:p.A1551S	exonic	ENSG00000198796	NA	nonsynonymous SNV	ENSG00000198796:ENST00000361673:exon5:c.G4651T:p.A1551S	NA	NA	18q21.32	NA	Name=NFKB,PAX5-N19,TCF12,TBP,EBF,Egr-1,Pol2-4H8,Rad21,Oct-2,p300,BATF,CHD2_(N-1250),POU2F2,Pol2,SP1,PU.1,BCL11A,IRF4_(M-17)	Name=48	NA	rs3809983	0.38	0.38	0.368	0.33147	0.5348	0.2381	0.3862	0.2118	0.3415	0.55	0.24	0.46	0.23	0.4258	0.55	0.53	T	0.612	P	0.115	B	0.011	N	1.000	P	1.24	L	0.86	T	-0.921	T	0.000	T	0.08	2.114	13.02	-0.092	0.043	-0.557	0.463	2.113587	2.113587	0	0.487326	0.259873	NA	0.457	NA	8.3854074
814	8	144124609	144124609	T	C	exonic	C8orf31	NA	nonsynonymous SNV	C8orf31:NM_173687:exon3:c.T116C:p.L39P	exonic	ENSG00000177335	NA	nonsynonymous SNV	ENSG00000177335:ENST00000395172:exon3:c.T116C:p.L39P,ENSG00000177335:ENST00000524181:exon3:c.T101C:p.L34P	NA	NA	8q24.3	NA	NA	NA	NA	rs11136300	0.71	0.71	0.681	0.705272	0.6392	0.7282	0.6873	0.7428	0.7117	0.64	0.79	0.67	0.75	0.6707	0.79	0.3	T	0.001	B	0.006	B	.	.	1.000	P	0	N	0.34	T	-0.982	T	0.000	T	0.094	-0.624	1.232	-4.36	-1.757	-2.651	1.005	-0.623858	NA	0.13	0.638837	0.722197	NA	0.594	NA	8.3845964
814	3	126261345	126261345	G	A	exonic	CHST13	NA	nonsynonymous SNV	CHST13:NM_152889:exon3:c.G950A:p.R317Q	exonic	ENSG00000180767	NA	nonsynonymous SNV	ENSG00000180767:ENST00000319340:exon3:c.G950A:p.R317Q	Score=578;Name=lod=297	NA	3q21.3	NA	NA	NA	NA	rs1056522	0.34	0.34	0.372	0.321885	0.2992	0.2569	0.3444	0.4622	0.2065	0.3	0.26	0.35	0.47	0.3697	0.47	0.33	T	0.211	B	0.085	B	0.000	U	0.000	P	1.3	L	-0.7	T	-0.929	T	0.000	T	0.043	0.699	7.729	1.96	0.102	1.832	7.541	0.698807	NA	0.21	0.283032	0.42549	NA	0.399	NA	8.3814014
814	13	111160304	111160304	G	A	exonic	COL4A2	NA	synonymous SNV	COL4A2:NM_001846:exon47:c.G4617A:p.A1539A	exonic	ENSG00000134871	NA	synonymous SNV	ENSG00000134871:ENST00000360467:exon47:c.G4617A:p.A1539A	NA	NA	13q34	Score=825;Name=V$PAX4_01	Name=CTCF,c-Myc,AP-2gamma,HA-E2F1	Name=14	NA	rs391859	0.11	0.11	0.113	0.100839	0.0915	0.128	0.1974	0.0711	0.0542	0.09	0.14	0.16	0.07	0.101	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.746422	NA	NA	0.094852	0.072095	NA	0.109	NA	8.3793146
814	14	95884323	95884323	G	A	exonic	SYNE3	NA	nonsynonymous SNV	SYNE3:NM_152592:exon17:c.C2768T:p.A923V	exonic	ENSG00000176438	NA	nonsynonymous SNV	ENSG00000176438:ENST00000554873:exon13:c.C2039T:p.A680V,ENSG00000176438:ENST00000334258:exon17:c.C2768T:p.A923V,ENSG00000176438:ENST00000557275:exon17:c.C2753T:p.A918V	Score=355;Name=lod=37	NA	14q32.13	NA	NA	NA	NA	rs12434757	0.56	0.56	0.563	0.55012	0.659	0.5	0.5461	0.5	0.5603	0.66	0.5	0.56	0.48	0.6173	0.68	1	T	0.0	B	0.003	B	0.190	N	0.000	P	-1.32	N	2.14	T	-0.944	T	0.000	T	0.082	-0.086	3.58	2.34	-0.092	1.201	8.572	-0.085774	NA	1	0.678953	0.517703	ID=COSM1477880,COSM433554,COSM433553;OCCURENCE=2(breast)	0.188	NA	8.3780804
814	2	48681868	48681868	C	G	exonic	PPP1R21	NA	synonymous SNV	PPP1R21:NM_001135629:exon3:c.C261G:p.G87G,PPP1R21:NM_001193475:exon3:c.C261G:p.G87G,PPP1R21:NM_152994:exon3:c.C261G:p.G87G	exonic	ENSG00000162869	NA	synonymous SNV	ENSG00000162869:ENST00000281394:exon3:c.C261G:p.G87G,ENSG00000162869:ENST00000294952:exon3:c.C261G:p.G87G,ENSG00000162869:ENST00000431614:exon3:c.C123G:p.G41G,ENSG00000162869:ENST00000449090:exon3:c.C261G:p.G87G	Score=515;Name=lod=165	NA	2p16.3	NA	Name=Max	Name=48	NA	rs76587580	0.05	0.05	0.049	0.0305511	0.1103	NA	0.0476	0.0023	0.0061	0.12	NA	0.07	0.002	0.0745	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.110497	NA	NA	0.103953	0.024512	NA	0.022	NA	8.3779136
814	20	56098733	56098733	T	C	exonic	CTCFL	NA	nonsynonymous SNV	CTCFL:NM_001269041:exon1:c.A529G:p.T177A,CTCFL:NM_001269044:exon1:c.A529G:p.T177A,CTCFL:NM_001269048:exon1:c.A529G:p.T177A,CTCFL:NM_001269052:exon1:c.A529G:p.T177A,CTCFL:NM_001269040:exon2:c.A529G:p.T177A,CTCFL:NM_001269042:exon2:c.A529G:p.T177A,CTCFL:NM_001269043:exon2:c.A529G:p.T177A,CTCFL:NM_001269045:exon2:c.A529G:p.T177A,CTCFL:NM_001269046:exon2:c.A529G:p.T177A,CTCFL:NM_001269047:exon2:c.A529G:p.T177A,CTCFL:NM_001269051:exon2:c.A529G:p.T177A,CTCFL:NM_080618:exon3:c.A529G:p.T177A	exonic	ENSG00000124092	NA	nonsynonymous SNV	ENSG00000124092:ENST00000422109:exon1:c.A529G:p.T177A,ENSG00000124092:ENST00000426658:exon1:c.A529G:p.T177A,ENSG00000124092:ENST00000432255:exon1:c.A529G:p.T177A,ENSG00000124092:ENST00000433949:exon1:c.A529G:p.T177A,ENSG00000124092:ENST00000243914:exon2:c.A529G:p.T177A,ENSG00000124092:ENST00000371196:exon2:c.A529G:p.T177A,ENSG00000124092:ENST00000422869:exon2:c.A529G:p.T177A,ENSG00000124092:ENST00000423479:exon2:c.A529G:p.T177A,ENSG00000124092:ENST00000429804:exon2:c.A529G:p.T177A	NA	NA	20q13.31	NA	NA	NA	NA	rs6025606	0.74	0.74	0.763	0.749002	0.661	0.7361	0.6859	0.9312	0.6513	0.65	0.76	0.68	0.92	0.663	0.92	0.92	T	0.005	B	0.003	B	0.427	N	1.000	P	0.745	N	3.55	T	-0.948	T	0.000	T	0.025	0.075	4.405	-6.63	-2.144	-3.240	1.356	0.074755	NA	0.2	0.631512	0.87744	NA	0.754	NA	8.3778214
814	3	124728626	124728626	A	G	exonic	HEG1	NA	nonsynonymous SNV	HEG1:NM_020733:exon8:c.T3116C:p.M1039T	exonic	ENSG00000173706	NA	nonsynonymous SNV	ENSG00000173706:ENST00000311127:exon8:c.T3116C:p.M1039T	NA	NA	3q21.2	NA	NA	NA	NA	rs6438869	0.64	0.64	0.623	0.628195	0.6491	0.5982	0.7233	0.5113	0.728	0.67	0.61	0.75	0.56	0.6505	0.75	1	T	0.0	B	0.0	B	0.159	N	1.000	P	-1.245	N	-2.83	D	-0.881	T	0.000	T	0.034	-3.164	0.001	-7.74	-3.321	-0.837	19.552	-3.164122	NA	1	0.655918	0.559647	NA	0.623	NA	8.3778154
814	8	22021517	22021517	G	A	exonic	SFTPC	NA	nonsynonymous SNV	SFTPC:NM_001172357:exon5:c.G539A:p.S180N,SFTPC:NM_001172410:exon5:c.G557A:p.S186N,SFTPC:NM_003018:exon5:c.G557A:p.S186N	exonic	ENSG00000168484	NA	nonsynonymous SNV	ENSG00000168484:ENST00000524255:exon4:c.G398A:p.S133N,ENSG00000168484:ENST00000318561:exon5:c.G557A:p.S186N,ENSG00000168484:ENST00000521315:exon5:c.G539A:p.S180N	Score=450;Name=lod=90	NA	8p21.3	NA	NA	NA	NA	rs1124	0.26	0.26	0.238	0.236022	0.3211	0.3006	0.2695	0.0832	0.2648	0.33	0.3	0.28	0.1	0.3001	0.33	0.38	T	0.004	B	0.004	B	0.245	N	0.000	P	.	.	-1.24	T	-1.060	T	0.000	T	0.022	2.762	15.2	2.33	0.695	0.610	5.359	2.76201	2.76201	0.35	0.334928	0.105366	NA	0.29	NA	8.3772054
814	9	139327439	139327439	A	G	exonic	INPP5E	NA	synonymous SNV	INPP5E:NM_019892:exon5:c.T1248C:p.T416T	exonic	ENSG00000148384	NA	synonymous SNV	ENSG00000148384:ENST00000371712:exon5:c.T1248C:p.T416T	Score=617;Name=lod=430	NA	9q34.3	Score=808;Name=V$SRF_C	Name=NRSF	NA	NA	rs10781542	0.38	0.38	0.343	0.378395	0.4145	0.1935	0.6196	0.3896	0.3456	0.43	0.21	0.53	0.39	0.4194	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.036201	NA	NA	0.456153	0.396685	NA	0.341	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117264.2;CLNDSDB=.;CLNDSDBID=.	8.3766136
814	6	134493397	134493397	G	A	exonic	SGK1	NA	synonymous SNV	SGK1:NM_001143677:exon8:c.C804T:p.D268D,SGK1:NM_001143678:exon8:c.C762T:p.D254D,SGK1:NM_005627:exon8:c.C720T:p.D240D,SGK1:NM_001143676:exon10:c.C1005T:p.D335D	exonic	ENSG00000118515	NA	synonymous SNV	ENSG00000118515:ENST00000367857:exon7:c.C690T:p.D230D,ENSG00000118515:ENST00000475719:exon7:c.C588T:p.D196D,ENSG00000118515:ENST00000237305:exon8:c.C720T:p.D240D,ENSG00000118515:ENST00000413996:exon8:c.C762T:p.D254D,ENSG00000118515:ENST00000528577:exon8:c.C804T:p.D268D,ENSG00000118515:ENST00000367858:exon10:c.C1005T:p.D335D	Score=581;Name=lod=307	NA	6q23.2	NA	Name=CTCF,Pol2(phosphoS2),Pol2(b)	Name=43	NA	rs1057293	0.11	0.11	0.098	0.114417	0.0765	0.2232	0.1326	0.0726	0.0849	0.08	0.17	0.09	0.1	0.1162	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.431354	1.431354	NA	0.097791	0.096913	NA	0.123	NA	8.3761756
815	1	204948659	204948659	A	G	exonic	NFASC	NA	synonymous SNV	NFASC:NM_001160331:exon17:c.A2181G:p.P727P,NFASC:NM_001160332:exon18:c.A2136G:p.P712P,NFASC:NM_015090:exon18:c.A2136G:p.P712P,NFASC:NM_001005388:exon19:c.A2148G:p.P716P	exonic	ENSG00000163531	NA	synonymous SNV	ENSG00000163531:ENST00000404907:exon16:c.A2136G:p.P712P,ENSG00000163531:ENST00000513543:exon16:c.A2136G:p.P712P,ENSG00000163531:ENST00000404076:exon17:c.A2085G:p.P695P,ENSG00000163531:ENST00000430393:exon17:c.A2109G:p.P703P,ENSG00000163531:ENST00000360049:exon18:c.A2136G:p.P712P,ENSG00000163531:ENST00000367171:exon18:c.A2103G:p.P701P,ENSG00000163531:ENST00000401399:exon18:c.A2148G:p.P716P,ENSG00000163531:ENST00000539706:exon18:c.A2136G:p.P712P,ENSG00000163531:ENST00000338515:exon19:c.A2148G:p.P716P,ENSG00000163531:ENST00000338586:exon19:c.A2148G:p.P716P,ENSG00000163531:ENST00000339876:exon19:c.A2148G:p.P716P,ENSG00000163531:ENST00000367169:exon19:c.A2148G:p.P716P,ENSG00000163531:ENST00000367170:exon19:c.A2148G:p.P716P,ENSG00000163531:ENST00000367172:exon19:c.A2148G:p.P716P	NA	NA	1q32.1	NA	NA	NA	NA	rs6667532	0.1	0.1	0.102	0.0970447	0.0775	0.0139	0.0692	0.205	0.0767	0.08	0.02	0.07	0.24	0.0999	0.24	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.960	T	0.000	T	.	0.893	8.629	-10.5	-5.484	-2.604	11.333	0.893166	NA	NA	0.115698	0.21594	NA	0.174	NA	8.3735686
815	8	135612745	135612745	A	G	exonic	ZFAT	NA	synonymous SNV	ZFAT:NM_001174157:exon6:c.T2223C:p.D741D,ZFAT:NM_001167583:exon7:c.T2373C:p.D791D,ZFAT:NM_001174158:exon7:c.T2373C:p.D791D,ZFAT:NM_020863:exon7:c.T2409C:p.D803D,ZFAT:NM_001029939:exon8:c.T2373C:p.D791D	exonic	ENSG00000066827	NA	synonymous SNV	ENSG00000066827:ENST00000523399:exon6:c.T2223C:p.D741D,ENSG00000066827:ENST00000377838:exon7:c.T2409C:p.D803D,ENSG00000066827:ENST00000429442:exon7:c.T2373C:p.D791D,ENSG00000066827:ENST00000520214:exon7:c.T2373C:p.D791D,ENSG00000066827:ENST00000520356:exon7:c.T2373C:p.D791D,ENSG00000066827:ENST00000523243:exon7:c.T2409C:p.D803D,ENSG00000066827:ENST00000520727:exon8:c.T2373C:p.D791D	Score=753;Name=lod=1530	NA	8q24.22	Score=720;Name=V$SEF1_C	Name=TAF1,POU2F2,Pol2,IRF4_(M-17),Oct-2,EBF1_(C-8),BATF,EBF,Pol2-4H8,NFKB,PAX5-C20,TCF12	Name=7	NA	rs894344	0.49	0.49	0.441	0.491014	0.4274	0.5486	0.6225	0.4168	0.5041	0.43	0.55	0.6	0.44	0.4642	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.701443	2.701443	NA	0.401732	0.391227	NA	0.42	NA	8.3733346
815	5	127638759	127638759	A	G	exonic	FBN2	NA	synonymous SNV	FBN2:NM_001999:exon46:c.T5823C:p.H1941H	exonic	ENSG00000138829	NA	synonymous SNV	ENSG00000138829:ENST00000262464:exon46:c.T5823C:p.H1941H,ENSG00000138829:ENST00000508053:exon52:c.T5823C:p.H1941H	Score=514;Name=lod=163	NA	5q23.3	Score=792;Name=V$PAX6_01	NA	NA	NA	rs11955288	0.09	0.09	0.093	0.0928514	0.0954	0.0655	0.0692	0.1029	0.1217	0.09	0.06	0.1	0.12	0.0949	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.824931	NA	NA	0.103256	0.105765	NA	0.087	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000117025.1|RCV000125065.1;CLNDSDB=.|.;CLNDSDBID=.|.	8.3731106
815	15	45446156	45446156	C	T	exonic	DUOX1	NA	nonsynonymous SNV	DUOX1:NM_175940:exon27:c.C3532T:p.L1178F,DUOX1:NM_017434:exon28:c.C3532T:p.L1178F	exonic	ENSG00000137857	NA	nonsynonymous SNV	ENSG00000137857:ENST00000561166:exon17:c.C2470T:p.L824F,ENSG00000137857:ENST00000389037:exon27:c.C3532T:p.L1178F,ENSG00000137857:ENST00000321429:exon28:c.C3532T:p.L1178F	Score=544;Name=lod=217	NA	15q21.1	NA	NA	NA	NA	rs2458236	0.54	0.54	0.543	0.553315	0.661	0.4911	0.5029	0.388	0.7658	0.67	0.46	0.57	0.42	0.6248	0.68	0.57	T	0.002	B	0.019	B	0.003	N	0.999	P	0.615	N	-2.77	D	-0.905	T	0.000	T	0.097	1.342	10.41	3.35	0.354	0.792	6.258	1.342094	1.342094	0.28	0.676361	0.425387	ID=COSM147898;OCCURENCE=1(stomach)	0.551	NA	8.3711724
815	17	10450816	10450816	T	C	exonic	MYH2	NA	synonymous SNV	MYH2:NM_001100112:exon4:c.A324G:p.E108E,MYH2:NM_017534:exon4:c.A324G:p.E108E	exonic	ENSG00000125414	NA	synonymous SNV	ENSG00000125414:ENST00000578017:exon1:c.A87G:p.E29E,ENSG00000125414:ENST00000431502:exon3:c.A324G:p.E108E,ENSG00000125414:ENST00000532183:exon3:c.A324G:p.E108E,ENSG00000125414:ENST00000245503:exon4:c.A324G:p.E108E,ENSG00000125414:ENST00000397183:exon4:c.A324G:p.E108E,ENSG00000125414:ENST00000420805:exon4:c.A324G:p.E108E	Score=549;Name=lod=227	NA	17p13.1	NA	Name=eGFP-JunD,FOSL2,JunD	Name=9	Score=123;Name=963045_0_+_123	rs12600539	0.53	0.53	0.512	0.54353	0.3917	0.8492	0.5216	0.3797	0.6217	0.39	0.87	0.52	0.38	0.4922	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.097897	NA	NA	0.412558	0.400363	NA	0.522	NA	8.3702086
815	6	311938	311938	C	T	exonic	DUSP22	NA	synonymous SNV	DUSP22:NM_020185:exon3:c.C114T:p.H38H	exonic	ENSG00000112679	NA	synonymous SNV	ENSG00000112679:ENST00000344450:exon3:c.C114T:p.H38H,ENSG00000112679:ENST00000419235:exon3:c.C114T:p.H38H,ENSG00000112679:ENST00000603726:exon3:c.C114T:p.H38H,ENSG00000112679:ENST00000603795:exon3:c.C114T:p.H38H	Score=491;Name=lod=132	NA	6p25.3	NA	Name=CEBPB,Egr-1	Name=26	NA	rs11242786	0.05	0.05	0.036	0.0367412	0.1093	NA	0.0807	0.0045	0.0123	0.1	NA	0.07	0.01	0.0734	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.646356	1.646356	NA	0.114651	0.025193	NA	0.043	NA	8.3693156
815	1	236719193	236719193	A	G	exonic	HEATR1	NA	nonsynonymous SNV	HEATR1:NM_018072:exon39:c.T5561C:p.V1854A	exonic	ENSG00000119285	NA	nonsynonymous SNV	ENSG00000119285:ENST00000366581:exon38:c.T5318C:p.V1773A,ENSG00000119285:ENST00000366582:exon39:c.T5561C:p.V1854A	NA	NA	1q43	Score=871;Name=V$SREBP1_02	NA	NA	NA	rs1885533	0.55	0.55	0.521	0.485024	0.6759	0.4782	0.5086	0.3865	0.4121	0.68	0.5	0.54	0.41	0.6055	0.68	0.8	T	0.002	B	0.004	B	0.062	N	1.000	P	1.15	L	-0.09	T	-0.925	T	0.000	T	0.029	-0.004	3.992	2.76	0.415	1.277	6.413	-0.004214	NA	0.5	0.682674	0.442805	NA	0.609	NA	8.3692594
815	3	197427557	197427557	A	G	exonic	KIAA0226	NA	synonymous SNV	KIAA0226:NM_001145642:exon7:c.T1008C:p.T336T,KIAA0226:NM_014687:exon7:c.T1188C:p.T396T	exonic	ENSG00000145016	NA	synonymous SNV	ENSG00000145016:ENST00000447048:exon1:c.T84C:p.T28T,ENSG00000145016:ENST00000273582:exon7:c.T1008C:p.T336T,ENSG00000145016:ENST00000296343:exon7:c.T1188C:p.T396T,ENSG00000145016:ENST00000389665:exon7:c.T1188C:p.T396T,ENSG00000145016:ENST00000449205:exon7:c.T1188C:p.T396T	NA	NA	3q29	NA	NA	NA	NA	rs28394098	0.12	0.12	0.137	0.139177	0.1034	0.0308	0.0677	0.3169	0.0982	0.1	0.04	0.07	0.29	0.1007	0.29	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.988	T	0.000	T	.	0.422	6.29	-2.21	-0.698	-0.445	7.452	0.421625	NA	NA	0.09422	0.278077	NA	0.225	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117385.2;CLNDSDB=.;CLNDSDBID=.	8.3683466
815	9	35662251	35662251	T	C	exonic	ARHGEF39	NA	nonsynonymous SNV	ARHGEF39:NM_032818:exon8:c.A917G:p.H306R	exonic	ENSG00000137135	NA	nonsynonymous SNV	ENSG00000137135:ENST00000378387:exon8:c.A917G:p.H306R,ENSG00000137135:ENST00000378395:exon8:c.A809G:p.H270R,ENSG00000137135:ENST00000490638:exon9:c.A809G:p.H270R	Score=410;Name=lod=62	NA	9p13.3	NA	NA	NA	NA	rs2297879	0.33	0.33	0.315	0.305711	0.325	0.503	0.3545	0.0628	0.3763	0.34	0.5	0.38	0.1	0.3227	0.5	0.58	T	0.0	B	0.0	B	.	.	0.695	P	0.895	L	1.01	T	-0.907	T	0.000	T	0.066	0.365	5.983	2.39	0.169	0.418	7.524	0.365374	NA	0.27	0.317326	0.120517	NA	0.275	NA	8.3683074
815	9	100616583	100616583	T	C	exonic	FOXE1	NA	synonymous SNV	FOXE1:NM_004473:exon1:c.T387C:p.L129L	exonic	ENSG00000178919	NA	synonymous SNV	ENSG00000178919:ENST00000375123:exon1:c.T387C:p.L129L	Score=779;Name=lod=1959	NA	9q22.33	Score=838;Name=V$ARP1_01	Name=Pol2	Name=59	NA	rs3021523	0.88	0.88	0.85	0.882788	0.7604	0.9911	0.8271	0.969	0.82	0.76	0.99	0.81	0.97	0.8005	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.464984	1.464984	NA	0.737785	0.929545	NA	0.014	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000081101.1;CLNDSDB=.;CLNDSDBID=.	8.3679816
815	20	25276297	25276297	G	A	exonic	PYGB	NA	synonymous SNV	PYGB:NM_002862:exon19:c.G2370A:p.Q790Q	exonic	ENSG00000100994	NA	synonymous SNV	ENSG00000100994:ENST00000216962:exon19:c.G2370A:p.Q790Q	Score=519;Name=lod=172	NA	20p11.21	Score=778;Name=V$MYCMAX_03	NA	Name=7	NA	rs1130694	0.53	0.53	0.516	0.511581	0.4264	0.9107	0.3314	0.3729	0.5031	0.43	0.93	0.34	0.37	0.448	0.93	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.040	T	0.000	T	.	1.195	9.855	1.51	0.251	0.237	5.184	1.194604	NA	NA	0.425581	0.363595	NA	0.449	NA	8.3666856
815	8	8234192	8234192	G	C	exonic	SGK223	NA	nonsynonymous SNV	SGK223:NM_001080826:exon2:c.C1727G:p.S576C	exonic	ENSG00000182319	NA	nonsynonymous SNV	ENSG00000182319:ENST00000330777:exon2:c.C1727G:p.S576C,ENSG00000182319:ENST00000520004:exon3:c.C1727G:p.S576C	NA	NA	8p23.1	NA	Name=Pol2	NA	NA	rs4840953	0.43	0.43	0.385	0.454473	0.3022	0.6409	0.4323	0.3918	0.5194	0.29	0.68	0.39	0.41	0.3877	0.68	0.18	T	0.001	B	0.001	B	0.009	N	1.000	P	0.41	N	0.29	T	-0.914	T	0.000	T	0.216	1.297	10.25	1.93	1.199	0.024	4.110	1.297067	1.297067	0.1	0.277724	0.322948	NA	0.341	NA	8.3657094
815	19	4510560	4510560	C	T	exonic	PLIN4	NA	nonsynonymous SNV	PLIN4:NM_001080400:exon3:c.G3370A:p.A1124T	exonic	ENSG00000167676	NA	nonsynonymous SNV	ENSG00000167676:ENST00000301286:exon3:c.G3370A:p.A1124T	NA	NA	19p13.3	NA	NA	NA	NA	rs7251858	0.36	0.36	0.342	0.354633	0.3091	0.5645	0.304	0.27	0.3354	0.3	0.56	0.33	0.25	0.354	0.56	0.32	T	0.9	P	0.452	P	0.077	N	1.000	P	0.695	N	2.84	T	-0.996	T	0.000	T	0.097	2.823	15.4	1.51	1.353	0.396	3.856	2.823443	2.823443	0.62	0.304636	0.28309	ID=COSM1481191,COSM439757;OCCURENCE=1(breast)	0.217	NA	8.3655974
815	14	88946622	88946622	G	A	exonic	PTPN21	NA	nonsynonymous SNV	PTPN21:NM_007039:exon13:c.C1153T:p.L385F	exonic	ENSG00000070778	NA	nonsynonymous SNV	ENSG00000070778:ENST00000328736:exon12:c.C1153T:p.L385F,ENSG00000070778:ENST00000556564:exon13:c.C1153T:p.L385F	NA	NA	14q31.3	Score=900;Name=V$CREBP1CJUN_01	NA	NA	NA	rs2401751	0.34	0.34	0.345	0.35643	0.2962	0.38	0.2651	0.3835	0.4223	0.31	0.36	0.27	0.4	0.3313	0.42	0.37	T	0.236	B	0.03	B	0.002	N	1.000	P	0.805	L	-0.77	T	-0.988	T	0.000	T	0.027	0.862	8.49	0.973	0.284	4.629	3.566	0.861786	NA	0.15	0.340814	0.371312	NA	0.399	NA	8.3650194
816	8	10467160	10467160	G	A	exonic	RP1L1	NA	nonsynonymous SNV	RP1L1:NM_178857:exon4:c.C4448T:p.A1483V	exonic	ENSG00000183638	NA	nonsynonymous SNV	ENSG00000183638:ENST00000382483:exon4:c.C4448T:p.A1483V	NA	NA	8p23.1	NA	NA	NA	NA	rs62490855	0.14	0.14	0.131	0.176318	0.1421	0.1597	0.1686	0.0393	0.4192	0.15	0.17	0.18	0.05	0.1806	0.2	0.88	T	0.915	P	0.371	B	0.362	N	1.000	P	0.895	L	3.55	T	-0.956	T	0.000	T	0.024	2.094	12.96	-2.78	-0.403	-0.334	8.923	2.093607	2.093607	0.14	0.145783	0.060714	NA	0.159	NA	8.3648504
816	2	136555659	136555659	T	C	exonic	LCT	NA	nonsynonymous SNV	LCT:NM_002299:exon13:c.A4916G:p.N1639S	exonic	ENSG00000115850	NA	nonsynonymous SNV	ENSG00000115850:ENST00000264162:exon13:c.A4916G:p.N1639S	NA	NA	2q21.3	NA	NA	Name=6	NA	rs2322659	0.49	0.49	0.451	0.442692	0.6382	0.4623	0.4669	0.3011	0.3957	0.65	0.46	0.5	0.27	0.6058	0.73	0.23	T	0.013	B	0.031	B	0.152	N	1.000	P	0.28	N	1.54	T	-0.969	T	0.000	T	0.088	1.229	9.982	-8.89	-1.651	-0.869	10.073	1.228511	NA	0.25	0.725581	0.407172	NA	0.543	NA	8.3637524
816	19	11210912	11210912	C	T	exonic	LDLR	NA	synonymous SNV	LDLR:NM_000527:exon2:c.C81T:p.C27C,LDLR:NM_001195798:exon2:c.C81T:p.C27C,LDLR:NM_001195799:exon2:c.C81T:p.C27C,LDLR:NM_001195800:exon2:c.C81T:p.C27C,LDLR:NM_001195802:exon2:c.C81T:p.C27C,LDLR:NM_001195803:exon2:c.C81T:p.C27C	exonic	ENSG00000130164	NA	synonymous SNV	ENSG00000130164:ENST00000455727:exon2:c.C81T:p.C27C,ENSG00000130164:ENST00000535915:exon2:c.C81T:p.C27C,ENSG00000130164:ENST00000545707:exon2:c.C81T:p.C27C,ENSG00000130164:ENST00000557933:exon2:c.C81T:p.C27C,ENSG00000130164:ENST00000558013:exon2:c.C81T:p.C27C,ENSG00000130164:ENST00000558518:exon2:c.C81T:p.C27C	NA	Name=Cholesterol, total,LDL cholesterol	19p13.2	NA	Name=Pol2(b)	Name=20	NA	rs2228671	0.06	0.06	0.045	0.0569089	0.1014	0.0129	0.0965	0.0234	0.0736	0.09	0.01	0.12	0.02	0.0866	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.023031	NA	NA	0.116977	0.039038	NA	0.145	NA	8.3616896
816	6	32557506	32557506	T	C	exonic	HLA-DRB1	NA	nonsynonymous SNV	HLA-DRB1:NM_002124:exon1:c.A14G:p.K5R	exonic	ENSG00000196126	NA	nonsynonymous SNV	ENSG00000196126:ENST00000360004:exon1:c.A14G:p.K5R	NA	NA	6p21.32	NA	Name=TAF1,POU2F2,ZBTB33,Pol2,PU.1,RFX5_(N-494),YY1,Egr-1,Sin3Ak-20,YY1_(C-20),BCLAF1_(M33-P5B11),Pol2-4H8,NFKB,BCL3,ZEB1_(SC-25388),PAX5-N19,Oct-2,p300,TCF12,TBP	Name=46	NA	rs707953	NA	NA	0.376	0.482428	0.4791	0.4613	0.4841	0.5091	0.4703	NA	NA	NA	NA	0.4926	0.043	0.76	T	0.001	B	0.003	B	.	.	1.000	N	.	.	6.13	T	-1.039	T	0.000	T	0.403	0.329	5.781	-1.71	-0.165	-0.355	3.242	0.328507	NA	0.78	NA	NA	NA	0.036	NA	8.3616334
816	1	156640156	156640156	G	A	exonic	NES	NA	nonsynonymous SNV	NES:NM_006617:exon4:c.C3824T:p.P1275L	exonic	ENSG00000132688	NA	nonsynonymous SNV	ENSG00000132688:ENST00000368223:exon4:c.C3824T:p.P1275L	Score=272;Name=lod=17	NA	1q23.1	NA	NA	NA	NA	rs3748570	0.73	0.73	0.705	0.724441	0.6551	0.87	0.7104	0.711	0.6738	0.65	0.87	0.71	0.71	0.6745	0.87	1	T	0.0	B	0.0	B	0.012	N	1.000	P	-2.005	N	-1.7	D	-1.028	T	0.043	T	0.083	-1.374	0.026	4.95	0.732	0.911	4.630	-1.37356	NA	1	0.642674	0.693373	NA	0.558	NA	8.3610594
816	17	39674641	39674641	T	C	exonic	KRT15	NA	nonsynonymous SNV	KRT15:NM_002275:exon1:c.A439G:p.T147A	exonic	ENSG00000171346	NA	nonsynonymous SNV	ENSG00000171346:ENST00000254043:exon1:c.A439G:p.T147A,ENSG00000171346:ENST00000393976:exon3:c.A439G:p.T147A	NA	NA	17q21.2	NA	NA	Name=5	NA	rs1050784	0.72	0.72	0.683	0.732827	0.6481	0.9147	0.7867	0.593	0.7832	0.63	0.93	0.74	0.59	0.6864	0.93	0.52	T	0.001	B	0.006	B	0.604	N	1.000	P	0.83	L	-3.49	D	-0.995	T	0.000	T	0.021	-1.421	0.021	-3.05	-0.744	-0.885	5.699	-1.421478	NA	0.86	0.637791	0.586246	NA	0.746	NA	8.3610424
816	2	120078778	120078778	T	C	exonic	C2orf76	NA	nonsynonymous SNV	C2orf76:NM_001017927:exon4:c.A136G:p.I46V	exonic	ENSG00000186132	NA	nonsynonymous SNV	ENSG00000186132:ENST00000334816:exon3:c.A136G:p.I46V,ENSG00000186132:ENST00000409523:exon3:c.A136G:p.I46V,ENSG00000186132:ENST00000414534:exon3:c.A223G:p.I75V,ENSG00000186132:ENST00000409466:exon4:c.A136G:p.I46V,ENSG00000186132:ENST00000409877:exon4:c.A136G:p.I46V	NA	NA	2q14.2	NA	NA	NA	NA	rs1132267	0.65	0.65	0.661	0.655551	0.6531	0.4395	0.5922	0.8404	0.6759	0.67	0.47	0.61	0.85	0.664	0.85	0.67	T	0.004	B	0.016	B	0.023	N	1.000	P	0.355	N	1.42	T	-1.008	T	0.000	T	0.119	0.811	8.258	-2.9	-0.978	-1.428	11.409	0.810598	NA	0.71	0.658884	0.80402	ID=COSM441051;OCCURENCE=1(breast),1(large_intestine)	0.775	NA	8.3573494
816	11	47188411	47188411	C	T	exonic	ARFGAP2	NA	nonsynonymous SNV	ARFGAP2:NM_001242832:exon12:c.G1148A:p.S383N,ARFGAP2:NM_032389:exon13:c.G1232A:p.S411N	exonic	ENSG00000149182	NA	nonsynonymous SNV	ENSG00000149182:ENST00000526342:exon4:c.G353A:p.S118N,ENSG00000149182:ENST00000319543:exon7:c.G425A:p.S142N,ENSG00000149182:ENST00000426335:exon8:c.G824A:p.S275N,ENSG00000149182:ENST00000419701:exon12:c.G911A:p.S304N,ENSG00000149182:ENST00000524782:exon13:c.G1232A:p.S411N	Score=346;Name=lod=34	NA	11p11.2	NA	NA	NA	NA	rs3740691	0.34	0.34	0.371	0.388578	0.335	0.124	0.2435	0.6853	0.4182	0.33	0.14	0.26	0.65	0.3252	0.65	0.34	T	0.001	B	0.003	B	0.007	N	0.972	P	0.835	L	3.5	T	-1.003	T	0.000	T	0.06	1.757	11.84	3.76	0.703	0.616	6.683	1.757403	1.757403	0.33	0.317399	0.612676	NA	0.341	NA	8.3557344
817	X	100547933	100547933	A	G	exonic	TAF7L	NA	nonsynonymous SNV	TAF7L:NM_024885:exon1:c.T101C:p.L34P	exonic	ENSG00000102387	NA	nonsynonymous SNV	ENSG00000102387:ENST00000372907:exon1:c.T101C:p.L34P	NA	NA	Xq22.1	NA	NA	NA	NA	rs5951328	0.99	0.99	0.99682	NA	NA	NA	NA	NA	NA	0.99	1	0.99	1	0.9905	1	0.36	T	0.0	B	0.0	B	0.068	N	1.000	P	-0.205	N	2.47	T	-0.966	T	0.000	T	0.017	-0.036	3.832	-2.79	-1.418	-1.292	11.476	-0.035513	NA	0.13	0.988555	0.997132	NA	0.746	NA	8.3542784
817	17	46805443	46805443	A	G	exonic	HOXB13	NA	synonymous SNV	HOXB13:NM_006361:exon1:c.T513C:p.S171S	exonic	ENSG00000159184	NA	synonymous SNV	ENSG00000159184:ENST00000290295:exon1:c.T513C:p.S171S	Score=609;Name=lod=398	NA	17q21.32	Score=801;Name=V$PPARG_03	Name=ZNF263	NA	NA	rs9900627	0.12	0.12	0.101	0.121206	0.1064	0.1835	0.2075	0.0983	0.0419	0.1	0.17	0.16	0.09	0.1114	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.108704	NA	NA	0.096047	0.107354	NA	0.123	NA	8.3528196
817	16	855717	855717	C	G	exonic	PRR25	NA	nonsynonymous SNV	PRR25:NM_001013638:exon1:c.C275G:p.T92S	exonic	ENSG00000167945	NA	nonsynonymous SNV	ENSG00000167945:ENST00000301698:exon1:c.C275G:p.T92S	NA	NA	16p13.3	NA	NA	NA	NA	rs1005190	0.48	0.48	0.489	0.563299	0.2833	0.4494	0.4726	0.8525	0.6421	0.26	0.47	0.44	0.85	0.4082	0.85	0	D	0.0	B	0.0	B	.	.	1.000	P	0	N	1.27	T	-1.048	T	0.000	T	0.016	-2.773	0	0.364	-0.656	-1.151	5.166	-2.773183	NA	NA	0.291485	0.730155	ID=COSM1563479;OCCURENCE=1(large_intestine)	0.551	NA	8.3503484
817	8	24356818	24356818	A	C	exonic	ADAM7	NA	nonsynonymous SNV	ADAM7:NM_003817:exon17:c.A1912C:p.N638H	exonic	ENSG00000069206	NA	nonsynonymous SNV	ENSG00000069206:ENST00000520720:exon11:c.A1228C:p.N410H,ENSG00000069206:ENST00000175238:exon17:c.A1912C:p.N638H,ENSG00000069206:ENST00000380789:exon17:c.A1912C:p.N638H	NA	NA	8p21.2	NA	NA	NA	NA	rs13259668	0.3	0.3	0.277	0.326278	0.3062	0.1935	0.4452	0.3185	0.41	0.31	0.2	0.43	0.3	0.3436	0.43	0.66	T	0.001	B	0.001	B	0.060	N	1.000	P	0.81	L	1.49	T	-0.988	T	0.000	T	0.042	-0.988	0.278	-4.36	-0.866	-1.275	3.233	-0.98809	NA	0.14	0.333488	0.324557	NA	0.268	NA	8.3500454
817	11	118895686	118895686	C	T	exonic	SLC37A4	NA	synonymous SNV	SLC37A4:NM_001164280:exon9:c.G1224A:p.T408T,SLC37A4:NM_001467:exon10:c.G1224A:p.T408T,SLC37A4:NM_001164277:exon11:c.G1224A:p.T408T,SLC37A4:NM_001164279:exon11:c.G1005A:p.T335T,SLC37A4:NM_001164278:exon12:c.G1290A:p.T430T	exonic	ENSG00000137700,ENSG00000196655	NA	nonsynonymous SNV	ENSG00000196655:ENST00000533058:exon5:c.C701T:p.P234L	NA	NA	11q23.3	NA	NA	NA	NA	rs8192696	0.21	0.21	0.197	0.247804	0.2157	0.0823	0.2161	0.3638	0.317	0.21	0.06	0.23	0.36	0.2187	0.36	0	D	.	.	.	.	.	.	0.000	P	.	.	0.72	T	-0.977	T	0.000	T	.	1.447	10.78	-0.051	-0.115	-1.146	9.191	1.446975	1.446975	NA	0.216336	0.337209	NA	0.275	NA	8.349264
817	3	46480958	46480958	C	G	exonic	LTF	NA	nonsynonymous SNV	LTF:NM_001199149:exon15:c.G1605C:p.E535D,LTF:NM_002343:exon15:c.G1737C:p.E579D	exonic	ENSG00000012223	NA	nonsynonymous SNV	ENSG00000012223:ENST00000231751:exon15:c.G1737C:p.E579D,ENSG00000012223:ENST00000417439:exon15:c.G1731C:p.E577D,ENSG00000012223:ENST00000426532:exon15:c.G1605C:p.E535D,ENSG00000012223:ENST00000443496:exon18:c.G1698C:p.E566D	NA	NA	3p21.31	NA	NA	NA	NA	rs2073495	0.28	0.28	0.255	0.277157	0.3221	0.3661	0.3501	0.059	0.3824	0.31	0.36	0.37	0.07	0.3237	0.37	0.38	T	0.0	B	0.005	B	0.135	N	1.000	P	0.905	L	3.21	T	-0.981	T	0.000	T	0.112	0.53	6.87	-10.3	-3.002	-4.284	5.801	0.529868	NA	0.33	0.338605	0.100091	NA	0.268	NA	8.3489284
817	1	160105367	160105367	C	T	exonic	ATP1A2	NA	synonymous SNV	ATP1A2:NM_000702:exon16:c.C2259T:p.A753A	exonic	ENSG00000018625	NA	synonymous SNV	ENSG00000018625:ENST00000361216:exon16:c.C2259T:p.A753A,ENSG00000018625:ENST00000392233:exon16:c.C2259T:p.A753A	Score=567;Name=lod=270	NA	1q23.2	NA	NA	NA	NA	rs17846715	0.07	0.07	0.041	0.063099	0.0934	0.0615	0.1182	0.0045	0.0736	0.1	0.05	0.11	0.01	0.1077	0.12	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.049	T	0.038	T	.	1.187	9.827	1.26	0.494	0.425	4.873	1.187327	NA	NA	0.117093	0.022242	NA	0.138	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116450.2;CLNDSDB=.;CLNDSDBID=.	8.3484736
817	10	7605101	7605101	A	G	exonic	ITIH5	NA	nonsynonymous SNV	ITIH5:NM_032817:exon10:c.T2132C:p.F711S,ITIH5:NM_030569:exon14:c.T2774C:p.F925S	exonic	ENSG00000123243	NA	nonsynonymous SNV	ENSG00000123243:ENST00000298441:exon10:c.T2132C:p.F711S,ENSG00000123243:ENST00000256861:exon14:c.T2774C:p.F925S,ENSG00000123243:ENST00000446830:exon14:c.T2120C:p.F707S	Score=355;Name=lod=37	NA	10p14	NA	NA	NA	NA	rs10795551	0.97	0.97	0.962	0.966653	0.997	1	0.9856	0.8835	1	1	1	0.99	0.87	0.9909	1	0.85	T	0.0	B	0.0	B	0.000	N	0.000	P	.	.	5.11	T	-0.930	T	0.000	T	0.228	-0.5	1.706	4.88	1.466	3.775	12.193	-0.50037	NA	1	0.998256	0.91035	NA	0.978	NA	8.3471774
817	7	66459256	66459256	T	C	exonic	SBDS	NA	synonymous SNV	SBDS:NM_016038:exon2:c.A201G:p.K67K	exonic	ENSG00000126524	NA	synonymous SNV	ENSG00000126524:ENST00000246868:exon2:c.A201G:p.K67K,ENSG00000126524:ENST00000414306:exon2:c.A201G:p.K67K	Score=609;Name=lod=397	NA	7q11.21	NA	NA	Name=8	NA	rs1061695	0.07	0.07	0.045	0.0503195	0.1262	0.0079	0.1023	0.0098	0.0337	0.13	0.0035	0.12	0.01	0.084	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.617973	1.617973	NA	0.111047	0.02542	NA	0.123	CLINSIG=non-pathogenic;CLNDBN=Shwachman_syndrome;CLNREVSTAT=single;CLNACC=RCV000020727.1;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet:SNOMED_CT;CLNDSDBID=NBK1756:C0272170:260400:ORPHA811:89454001	8.3454196
818	1	186276661	186276661	A	G	exonic	PRG4	NA	nonsynonymous SNV	PRG4:NM_001127710:exon4:c.A1408G:p.T470A,PRG4:NM_001127709:exon5:c.A1531G:p.T511A,PRG4:NM_001127708:exon6:c.A1687G:p.T563A,PRG4:NM_005807:exon7:c.A1810G:p.T604A	exonic	ENSG00000116690	NA	nonsynonymous SNV	ENSG00000116690:ENST00000367482:exon4:c.A1408G:p.T470A,ENSG00000116690:ENST00000367485:exon5:c.A1531G:p.T511A,ENSG00000116690:ENST00000367483:exon6:c.A1687G:p.T563A,ENSG00000116690:ENST00000367486:exon6:c.A1681G:p.T561A,ENSG00000116690:ENST00000445192:exon7:c.A1810G:p.T604A	NA	NA	1q31.1	NA	NA	NA	NA	rs61831150	0.24	0.24	0.207	0.229433	0.33	0.125	0.4078	0.1415	0.226	0.34	0.13	0.4	0.12	0.3053	0.4	.	.	0.021	B	0.006	B	0.077	U	1.000	P	1.75	L	3.46	T	-0.918	T	0.000	T	0.231	0.53	6.871	-6.98	-1.252	0.345	2.033	0.53005	NA	0.36	0.35314	0.187472	ID=COSM1599884;OCCURENCE=1(central_nervous_system)	0.181	NA	8.3448934
818	1	233398713	233398713	C	T	exonic	PCNXL2	NA	nonsynonymous SNV	PCNXL2:NM_014801:exon2:c.G350A:p.R117K	exonic	ENSG00000135749	NA	nonsynonymous SNV	ENSG00000135749:ENST00000258229:exon2:c.G350A:p.R117K	NA	NA	1q42.2	NA	NA	NA	NA	rs1033325	0.24	0.24	0.226	0.276957	0.3429	0.1647	0.2291	0.2057	0.455	0.34	0.16	0.23	0.21	0.3205	0.34	0.42	T	0.0	B	0.0	B	.	.	1.000	P	0.115	N	0.01	T	-0.989	T	0.000	T	0.015	-1.071	0.172	2.71	0.416	1.031	1.353	-1.070678	NA	0.29	0.325129	0.231086	NA	0.196	NA	8.3448044
818	7	92762681	92762681	A	G	exonic	SAMD9L	NA	synonymous SNV	SAMD9L:NM_152703:exon5:c.T2604C:p.A868A	exonic	ENSG00000177409	NA	synonymous SNV	ENSG00000177409:ENST00000318238:exon5:c.T2604C:p.A868A,ENSG00000177409:ENST00000411955:exon6:c.T2604C:p.A868A,ENSG00000177409:ENST00000437805:exon6:c.T2604C:p.A868A	Score=437;Name=lod=80	NA	7q21.2	Score=792;Name=V$COMP1_01	Name=c-Fos	NA	NA	rs1029357	0.27	0.27	0.281	0.290735	0.0716	0.3482	0.3285	0.5174	0.1237	0.07	0.34	0.31	0.49	0.1712	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.788322	NA	NA	0.081996	0.421435	ID=COSM150326;OCCURENCE=1(stomach)	0.312	NA	8.3418706
818	11	48145375	48145375	A	C	exonic	PTPRJ	NA	nonsynonymous SNV	PTPRJ:NM_001098503:exon5:c.A827C:p.Q276P,PTPRJ:NM_002843:exon5:c.A827C:p.Q276P	exonic	ENSG00000149177	NA	nonsynonymous SNV	ENSG00000149177:ENST00000418331:exon5:c.A827C:p.Q276P,ENSG00000149177:ENST00000440289:exon5:c.A827C:p.Q276P	NA	NA	11p11.2	NA	NA	NA	NA	rs1566734	0.17	0.17	0.161	0.189896	0.161	0.3185	0.1239	0.1051	0.2485	0.16	0.26	0.13	0.09	0.1694	0.26	0.12	T	0.597	P	0.149	B	.	.	1.000	P	0.345	N	2.56	T	-0.983	T	0.000	T	0.2	1.286	10.21	1.54	0.062	0.077	3.856	1.286333	1.286333	0.15	0.161587	0.119945	ID=COSM1127775,COSM1127776;OCCURENCE=1(prostate)	0.123	CLINSIG=other;CLNDBN=Carcinoma_of_colon;CLNREVSTAT=single;CLNACC=RCV000009227.3;CLNDSDB=MedGen:SNOMED_CT;CLNDSDBID=C0699790:269533000	8.3413464
818	2	233633460	233633460	G	A	exonic	KCNJ13	NA	nonsynonymous SNV	KCNJ13:NM_001172417:exon3:c.C284T:p.T95I,KCNJ13:NM_002242:exon3:c.C524T:p.T175I	exonic	ENSG00000115474	NA	nonsynonymous SNV	ENSG00000115474:ENST00000410029:exon2:c.C524T:p.T175I,ENSG00000115474:ENST00000233826:exon3:c.C524T:p.T175I,ENSG00000115474:ENST00000438786:exon3:c.C284T:p.T95I	NA	NA	2q37.1	NA	NA	NA	NA	rs1801251	0.29	0.29	0.267	0.360024	0.2873	0.3532	0.3055	0.2398	0.6431	0.28	0.32	0.29	0.25	0.3548	0.39	0.06	T	0.0	B	0.0	B	0.875	N	1.000	P	0.55	N	1.88	T	-1.107	T	0.000	T	0.395	-1.163	0.094	2.27	-0.082	1.366	10.488	-1.16285	NA	0.39	0.350349	0.264639	ID=COSM149098;OCCURENCE=1(stomach)	0.304	NA	8.3408844
818	12	78334194	78334194	A	G	exonic	NAV3	NA	synonymous SNV	NAV3:NM_014903:exon2:c.A339G:p.L113L	exonic	ENSG00000067798	NA	synonymous SNV	ENSG00000067798:ENST00000228327:exon2:c.A339G:p.L113L,ENSG00000067798:ENST00000266692:exon2:c.A339G:p.L113L,ENSG00000067798:ENST00000397909:exon2:c.A339G:p.L113L,ENSG00000067798:ENST00000536525:exon2:c.A339G:p.L113L,ENSG00000067798:ENST00000549464:exon2:c.A339G:p.L113L	Score=646;Name=lod=563	NA	12q21.2	NA	Name=TCF4,Pol2,Pol2(b),GATA-2	Name=120	NA	rs1382639	0.11	0.11	0.094	0.116014	0.0964	0.1855	0.0865	0.0318	0.1994	0.1	0.19	0.08	0.04	0.1211	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.376004	1.376004	NA	0.108317	0.049133	NA	0.217	NA	8.3408496
818	20	30064331	30064331	A	G	exonic	REM1	NA	nonsynonymous SNV	REM1:NM_014012:exon2:c.A83G:p.H28R	exonic	ENSG00000088320	NA	nonsynonymous SNV	ENSG00000088320:ENST00000201979:exon2:c.A83G:p.H28R	Score=309;Name=lod=24	NA	20q11.21	Score=882;Name=V$E47_01	NA	NA	NA	rs1006459	0.45	0.45	0.443	0.454673	0.3221	0.2659	0.3386	0.9024	0.2628	0.31	0.28	0.38	0.89	0.3576	0.89	0.36	T	0.0	B	0.0	B	0.952	N	0.894	P	0.345	N	-0.15	T	-0.995	T	0.000	T	0.013	-0.01	3.961	0.213	-0.017	-0.783	5.039	-0.010297	NA	0.45	0.313953	0.804585	NA	0.42	NA	8.3396804
818	1	7913445	7913445	C	T	exonic	UTS2	NA	nonsynonymous SNV	UTS2:NM_021995:exon1:c.G47A:p.R16Q	exonic	ENSG00000049247	NA	nonsynonymous SNV	ENSG00000049247:ENST00000054668:exon1:c.G47A:p.R16Q	NA	NA	1p36.23	NA	NA	NA	NA	rs13306061	0.11	0.11	0.088	0.0850639	0.1829	0.0357	0.0994	0.0719	0.0429	0.18	0.03	0.12	0.07	0.1353	0.18	0.39	T	0.93	P	0.313	B	.	.	0.984	P	.	.	1.3	T	-1.045	T	0.000	T	0.054	0.953	8.886	2.75	0.465	-0.074	6.634	0.952879	NA	0	0.177326	0.083069	NA	0.123	NA	8.3378074
818	11	117859209	117859209	G	A	exonic	IL10RA	NA	synonymous SNV	IL10RA:NM_001558:exon2:c.G180A:p.A60A	exonic	ENSG00000110324	NA	synonymous SNV	ENSG00000110324:ENST00000227752:exon2:c.G180A:p.A60A,ENSG00000110324:ENST00000526544:exon2:c.G180A:p.A60A,ENSG00000110324:ENST00000541785:exon3:c.G120A:p.A40A	NA	NA	11q23.3	Score=779;Name=V$HTF_01	Name=EBF	Name=7	NA	rs4252249	0.11	0.11	0.117	0.125599	0.1123	0.0625	0.1859	0.1694	0.1022	0.11	0.05	0.15	0.17	0.1129	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.099291	NA	NA	0.106145	0.157428	NA	0.13	NA	8.3353216
819	2	21232195	21232195	G	A	exonic	APOB	NA	synonymous SNV	APOB:NM_000384:exon26:c.C7545T:p.T2515T	exonic	ENSG00000084674	NA	synonymous SNV	ENSG00000084674:ENST00000233242:exon26:c.C7545T:p.T2515T	Score=371;Name=lod=43	Name=Cholesterol, total,LDL cholesterol,Triglycerides	2p24.1	NA	Name=HEY1,FOSL2	NA	NA	rs693	0.27	0.27	0.255	0.250998	0.4423	0.0615	0.3775	0.2095	0.2157	0.43	0.08	0.4	0.18	0.3899	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.266992	NA	NA	0.500116	0.245574	NA	0.435	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116389.2;CLNDSDB=.;CLNDSDBID=.	8.3343506
819	7	100550138	100550138	C	T	intergenic	ACHE,MUC12	dist=56597;dist=62766	NA	NA	exonic	ENSG00000228273	NA	nonsynonymous SNV	ENSG00000228273:ENST00000379458:exon2:c.C719T:p.T240M	NA	NA	7q22.1	NA	NA	NA	NA	rs73714233	NA	NA	NA	0.000199681	NA	NA	0.0014	NA	NA	NA	NA	NA	NA	0.4998	0.48	0.14	T	.	.	.	.	.	.	.	.	0	N	.	.	-1.035	T	0.037	T	0.116	-0.194	3.057	-2.94	-1.027	-5.602	3.400	-0.1941	NA	0.15	NA	NA	NA	0.478	NA	8.3335334
819	1	120254567	120254567	T	C	UTR5	PHGDH	NM_006623:c.-79T>C	NA	NA	UTR5	ENSG00000092621	ENST00000369409:c.-79T>C	NA	NA	NA	NA	1p12	Score=755;Name=V$TCF11MAFG_01	Name=NF-YB,HEY1,GTF2F1_(RAP-74),CEBPB,TBP,USF2,E2F4,Pol2(b),TAF1,E2F1,Pol2-4H8,ZNF263,TAF7_(SQ-8),Sin3Ak-20,HA-E2F1,Pol2(phosphoS2),SP1,NRSF,RFX5_(N-494),Pol2	Name=142	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.237872	NA	NA	NA	NA	NA	NA	NA	8.3333334
819	2	182766624	182766624	C	A	exonic	SSFA2	NA	nonsynonymous SNV	SSFA2:NM_001130445:exon8:c.C844A:p.P282T,SSFA2:NM_006751:exon8:c.C844A:p.P282T	exonic	ENSG00000138434	NA	nonsynonymous SNV	ENSG00000138434:ENST00000428267:exon7:c.C385A:p.P129T,ENSG00000138434:ENST00000320370:exon8:c.C844A:p.P282T,ENSG00000138434:ENST00000409001:exon8:c.C844A:p.P282T,ENSG00000138434:ENST00000431877:exon8:c.C844A:p.P282T	NA	NA	2q31.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.69	T	0.0	B	0.001	B	0.415	N	0.960	N	0.345	N	2.76	T	-0.976	T	0.017	T	0.147	-0.083	3.594	1.56	0.080	0.228	0.793	-0.08308	NA	0.29	NA	NA	NA	NA	NA	8.3333334
819	10	70715932	70715932	C	A	UTR5	DDX21	NM_004728:c.-50C>A	NA	NA	UTR5	ENSG00000165732	ENST00000354185:c.-50C>A	NA	NA	Score=397;Name=lod=55	NA	10q22.1	NA	Name=Max,ELF1_(SC-631),Oct-2,GTF2F1_(RAP-74),TAF1,ETS1,E2F6_(H-50),E2F4,POU2F2,GABP,Pol2,Mxi1_(bHLH),PU.1,Pol2(phosphoS2),eGFP-JunD,E2F6,c-Myc,HEY1,PAX5-N19,TCF12,TBP,IRF1,Pol2(b),ELK4,Egr-1,Sin3Ak-20,Pol2-4H8	Name=148	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.008939	2.008939	NA	NA	NA	NA	NA	NA	8.3333334
819	14	103192965	103192965	G	C	UTR3	RCOR1	NM_015156:c.*122G>C	NA	NA	UTR3	ENSG00000089902	ENST00000262241:c.*122G>C,ENST00000570597:c.*122G>C	NA	NA	Score=606;Name=lod=386	NA	14q32.31	Score=801;Name=V$SRF_C	Name=GATA-2,GATA3_(SC-268)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.316502	2.316502	NA	NA	NA	NA	NA	NA	8.3333334
819	15	74043552	74043552	G	A	UTR5	C15orf59	NM_001039614:c.-81C>T	NA	NA	UTR5	ENSG00000205363	ENST00000569673:c.-81C>T,ENST00000379822:c.-81C>T	NA	NA	Score=589;Name=lod=330	NA	15q24.1	Score=855;Name=V$MAZR_01	NA	Name=3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.312	1.312	NA	NA	NA	NA	NA	NA	8.3333334
819	1	145109583	145109583	C	A	exonic	SEC22B	NA	unknown	UNKNOWN	ncRNA_exonic	ENSG00000223380	NA	NA	NA	Score=669;Name=lod=697	NA	1q21.1	Score=723;Name=V$LUN1_01	Name=BDP1	Name=8	NA	rs2794053	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.045514	3.045514	NA	NA	NA	NA	0.486	NA	8.3333333
819	3	170214323	170214323	C	T	intronic	SLC7A14	NA	NA	NA	ncRNA_exonic	ENSG00000241416	NA	NA	NA	Score=646;Name=lod=565	NA	3q26.2	NA	Name=CTCF_(SC-5916),CTCF,Rad21	Name=3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.085113	NA	NA	NA	NA	NA	NA	NA	8.3333333
819	1	33292442	33292442	C	T	exonic	S100PBP	NA	nonsynonymous SNV	S100PBP:NM_001256121:exon3:c.C742T:p.P248S,S100PBP:NM_022753:exon3:c.C742T:p.P248S	exonic	ENSG00000116497	NA	nonsynonymous SNV	ENSG00000116497:ENST00000373475:exon3:c.C742T:p.P248S,ENSG00000116497:ENST00000373476:exon3:c.C742T:p.P248S,ENSG00000116497:ENST00000398243:exon3:c.C742T:p.P248S	NA	NA	1p35.1	NA	NA	NA	NA	rs146571632	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0001	0.0005	.	.	0.043	B	0.029	B	0.000	N	1.000	N	0.805	L	.	.	-1.043	T	0.060	T	0.098	1.128	9.597	2.62	0.372	0.074	5.549	1.127564	NA	0	0	0.000454	NA	NA	NA	8.3332334
819	1	155829478	155829478	C	G	UTR5	SYT11	NM_152280:c.-75C>G	NA	NA	UTR5	ENSG00000132718	ENST00000368324:c.-75C>G,ENST00000539162:c.-20873C>G	NA	NA	Score=272;Name=lod=17	NA	1q22	Score=772;Name=V$MIF1_01	Name=Pol2,CtBP2,Pol2-4H8,HDAC2_(SC-6296),CEBPB	Name=50	NA	rs16837068	0.02	0.02	0.022	0.033746	NA	0.001	0.0043	0.1097	0.0204	NA	NA	0.01	0.09	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.181367	NA	NA	0.000314	0.065029	NA	0.029	NA	8.3330194
819	14	99183532	99183532	C	T	exonic	C14orf177	NA	nonsynonymous SNV	C14orf177:NM_182560:exon4:c.C299T:p.S100L	exonic	ENSG00000176605	NA	nonsynonymous SNV	ENSG00000176605:ENST00000325812:exon4:c.C299T:p.S100L	NA	NA	14q32.2	NA	NA	NA	NA	rs143969442	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0002	0.0005	0	D	0.0	B	0.0	B	.	.	1.000	N	0	N	1.14	T	-1.028	T	0.040	T	0.064	1.225	9.968	-0.782	-0.137	-0.077	4.252	1.224784	NA	NA	0.000465	0.000227	ID=COSM355766;OCCURENCE=1(lung)	NA	NA	8.3326684
819	12	9256972	9256972	C	T	exonic	A2M	NA	nonsynonymous SNV	A2M:NM_000014:exon11:c.G1129A:p.V377I	exonic	ENSG00000175899	NA	nonsynonymous SNV	ENSG00000175899:ENST00000318602:exon11:c.G1129A:p.V377I	NA	NA	12p13.31	NA	NA	NA	NA	rs200364039	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0008	0.0004	0.19	T	0.051	B	0.006	B	0.861	N	1.000	N	1.575	L	1.64	T	-1.004	T	0.068	T	0.032	0.621	7.34	0.749	-0.061	-1.206	8.160	0.620724	NA	0.19	0.000365	0	NA	NA	NA	8.3321684
819	2	152311570	152311570	G	A	exonic	RIF1	NA	nonsynonymous SNV	RIF1:NM_001177665:exon21:c.G2506A:p.G836S,RIF1:NM_001177663:exon22:c.G2506A:p.G836S,RIF1:NM_001177664:exon22:c.G2506A:p.G836S,RIF1:NM_018151:exon22:c.G2506A:p.G836S	exonic	ENSG00000080345	NA	nonsynonymous SNV	ENSG00000080345:ENST00000243326:exon21:c.G2506A:p.G836S,ENSG00000080345:ENST00000430328:exon21:c.G2506A:p.G836S,ENSG00000080345:ENST00000428287:exon22:c.G2506A:p.G836S,ENSG00000080345:ENST00000444746:exon22:c.G2506A:p.G836S,ENSG00000080345:ENST00000453091:exon22:c.G2506A:p.G836S	NA	NA	2q23.3	NA	NA	NA	NA	rs2444263	0.7	0.7	0.696	0.639377	0.6779	0.756	0.7061	0.5756	0.5184	0.66	0.79	0.71	0.63	0.6607	0.79	1	T	0.013	B	0.003	B	0.024	N	1.000	P	-1.7	N	-4.91	D	-0.999	T	0.000	T	0.292	-0.367	2.271	3.18	0.084	1.088	8.741	-0.366915	NA	1	0.662907	0.577394	NA	0.696	NA	8.3318264
819	9	18950895	18950895	T	C	exonic	FAM154A	NA	nonsynonymous SNV	FAM154A:NM_153707:exon2:c.A79G:p.K27E	exonic	ENSG00000155875	NA	nonsynonymous SNV	ENSG00000155875:ENST00000380530:exon2:c.A79G:p.K27E,ENSG00000155875:ENST00000380534:exon2:c.A79G:p.K27E	Score=536;Name=lod=201	NA	9p22.1	Score=895;Name=V$CDC5_01	NA	NA	NA	rs7021572	0.52	0.52	0.462	0.478035	0.6909	0.5169	0.5865	0.1331	0.6084	0.68	0.54	0.62	0.16	0.6145	0.7	0.18	T	0.084	B	0.069	B	0.119	N	0.000	P	1.15	L	1.62	T	-1.007	T	0.000	T	0.052	2.253	13.49	0.28	0.371	1.033	7.766	2.25297	2.25297	0.03	0.696512	0.221743	NA	0.428	NA	8.3314214
819	15	29346257	29346257	C	T	exonic	APBA2	NA	nonsynonymous SNV	APBA2:NM_001130414:exon3:c.C170T:p.A57V,APBA2:NM_005503:exon3:c.C170T:p.A57V	exonic	ENSG00000034053	NA	nonsynonymous SNV	ENSG00000034053:ENST00000558358:exon2:c.C170T:p.A57V,ENSG00000034053:ENST00000411764:exon3:c.C170T:p.A57V,ENSG00000034053:ENST00000558259:exon3:c.C170T:p.A57V,ENSG00000034053:ENST00000560283:exon3:c.C170T:p.A57V,ENSG00000034053:ENST00000558804:exon4:c.C170T:p.A57V,ENSG00000034053:ENST00000561069:exon4:c.C170T:p.A57V,ENSG00000034053:ENST00000558330:exon5:c.C170T:p.A57V,ENSG00000034053:ENST00000558402:exon5:c.C170T:p.A57V	Score=313;Name=lod=25	NA	15q13.1	NA	NA	NA	NA	rs141358568	0.0014	0.0014	NA	0.000798722	0.001	NA	0.0043	NA	NA	NA	NA	0.01	NA	0.0004	0.01	0.15	T	0.0	B	0.001	B	0.607	N	1.000	N	-0.41	N	1.02	T	-1.027	T	0.040	T	0.188	0.444	6.412	1.71	0.360	-0.285	9.187	0.444058	NA	0.28	0.000698	0.000681	ID=COSM268249;OCCURENCE=1(ovary),1(large_intestine),1(endometrium)	NA	NA	8.3312354
819	11	63487782	63487782	C	T	exonic	RTN3	NA	nonsynonymous SNV	RTN3:NM_001265590:exon2:c.C1472T:p.P491L,RTN3:NM_201428:exon2:c.C1751T:p.P584L,RTN3:NM_001265589:exon3:c.C1808T:p.P603L	exonic	ENSG00000133318	NA	nonsynonymous SNV	ENSG00000133318:ENST00000339997:exon2:c.C1751T:p.P584L,ENSG00000133318:ENST00000540798:exon2:c.C1472T:p.P491L,ENSG00000133318:ENST00000377819:exon3:c.C1808T:p.P603L	NA	NA	11q13.1	NA	NA	Name=49	NA	rs116807490	0.01	0.01	0.007	0.00858626	NA	NA	0.0029	0.031	NA	NA	NA	0.01	0.02	0.0021	0.022	0.41	T	0.021	B	0.013	B	0.025	N	1.000	N	0.145	N	1.98	T	-1.023	T	0.015	T	0.048	1.417	10.68	0.155	-0.045	0.003	7.713	1.417322	1.417322	0.45	0	0.021808	NA	0.014	NA	8.3312334
819	14	24705004	24705004	G	T	exonic	GMPR2	NA	nonsynonymous SNV	GMPR2:NM_016576:exon3:c.G323T:p.G108V,GMPR2:NM_001002000:exon4:c.G269T:p.G90V,GMPR2:NM_001002001:exon4:c.G269T:p.G90V,GMPR2:NM_001002002:exon4:c.G269T:p.G90V	exonic	ENSG00000100938	NA	nonsynonymous SNV	ENSG00000100938:ENST00000348719:exon3:c.G269T:p.G90V,ENSG00000100938:ENST00000420554:exon3:c.G323T:p.G108V,ENSG00000100938:ENST00000557854:exon3:c.G323T:p.G108V,ENSG00000100938:ENST00000558279:exon3:c.G107T:p.G36V,ENSG00000100938:ENST00000559104:exon3:c.G323T:p.G108V,ENSG00000100938:ENST00000355299:exon4:c.G269T:p.G90V,ENSG00000100938:ENST00000399440:exon4:c.G269T:p.G90V,ENSG00000100938:ENST00000559409:exon4:c.G257T:p.G86V,ENSG00000100938:ENST00000559836:exon4:c.G269T:p.G90V,ENSG00000100938:ENST00000559910:exon4:c.G269T:p.G90V,ENSG00000100938:ENST00000560139:exon4:c.G269T:p.G90V,ENSG00000100938:ENST00000561035:exon5:c.G398T:p.G133V	NA	NA	14q12	Score=830;Name=V$MRF2_01	NA	NA	NA	rs45530636	0.0005	0.0005	NA	0.000599042	0.001	NA	0.0014	NA	0.001	NA	NA	0.0028	NA	0.0003	0.0028	0.23	T	0.004	B	0.017	B	0.415	N	1.000	N	-0.345	N	-1.13	T	-0.985	T	0.152	T	0.428	1.998	12.64	-0.053	0.235	0.842	2.511	1.997776	1.997776	0.14	0.000843	0	NA	NA	NA	8.3311904
819	6	29910742	29910742	G	C	exonic	HLA-A	NA	nonsynonymous SNV	HLA-A:NM_001242758:exon2:c.G282C:p.Q94H,HLA-A:NM_002116:exon2:c.G282C:p.Q94H	exonic	ENSG00000206503	NA	nonsynonymous SNV	ENSG00000206503:ENST00000376802:exon2:c.G282C:p.Q94H,ENSG00000206503:ENST00000376806:exon2:c.G282C:p.Q94H,ENSG00000206503:ENST00000376809:exon2:c.G282C:p.Q94H,ENSG00000206503:ENST00000396634:exon4:c.G282C:p.Q94H	NA	NA	6p22.1	NA	Name=CTCF,Pol2-4H8	Name=11	NA	rs78306866	0.65	0.65	0.566	0.680711	0.6899	0.6706	0.7133	0.6634	0.682	0.66	0.7	0.67	0.59	0.6575	0.7	1	T	0.001	B	0.003	B	0.008	N	1.000	P	-0.835	N	5.76	T	-0.981	T	0.000	T	0.13	0.617	7.32	-0.587	-0.256	-3.480	0.498	0.61673	NA	0.89	0.655136	0.605323	NA	0.543	NA	8.3307974
819	5	57754851	57754851	A	G	exonic	PLK2	NA	synonymous SNV	PLK2:NM_006622:exon2:c.T339C:p.I113I,PLK2:NM_001252226:exon3:c.T297C:p.I99I	exonic	ENSG00000145632	NA	synonymous SNV	ENSG00000145632:ENST00000274289:exon2:c.T339C:p.I113I	Score=683;Name=lod=797	NA	5q11.2	NA	Name=CEBPB,p300_(N-15),Rad21,STAT3,TCF4,JunD	Name=105	NA	rs702722	0.17	0.17	0.154	0.169728	0.1024	0.2966	0.0692	0.23	0.0982	0.1	0.28	0.07	0.2	0.1212	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.509148	1.509148	NA	0.112674	0.195188	NA	0.159	NA	8.3303926
819	7	99746548	99746548	C	T	UTR5	LAMTOR4	NM_001008395:c.-48C>T	NA	NA	UTR5	ENSG00000188186	ENST00000341942:c.-48C>T	NA	NA	Score=295;Name=lod=21	NA	7q22.1	Score=885;Name=V$ELK1_02	Name=TBP,USF-1,TCF12,Nrf1,THAP1_(SC-98174),SRF,NFKB,HEY1,ZEB1_(SC-25388),c-Myc,Pol2-4H8,c-Fos,ZNF263,Sin3Ak-20,RFX5_(N-494),CHD2_(N-1250),CEBPB,BHLHE40,NF-YB,ELF1_(SC-631),Max,USF1_(SC-8983),E2F6,Pol2(phosphoS2),SP1,ATF3,Mxi1_(bHLH),Pol2,HMGN3,USF2,GABP,NF-YA,SREBP1,TAF1,GATA-1	Name=148	NA	rs112691884	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0011	0.002	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.83115	2.83115	NA	0.001977	0.000454	NA	NA	NA	8.3302564
819	1	145368461	145368461	A	C	exonic	NBPF9	NA	unknown	UNKNOWN	exonic	ENSG00000163386	NA	nonsynonymous SNV	ENSG00000163386:ENST00000369338:exon16:c.A1787C:p.E596A,ENSG00000163386:ENST00000369339:exon17:c.A1793C:p.E598A,ENSG00000163386:ENST00000342960:exon84:c.A10439C:p.E3480A	NA	NA	1q21.1	NA	NA	NA	NA	rs12128680	NA	NA	0.442	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3371	0.011	0.02	D	0.0	B	0.004	B	.	.	1.000	N	2.65	M	2.94	T	-0.967	T	0.013	T	0.14	0.393	6.133	-1.11	-0.323	0.155	2.705	0.392687	NA	0.05	NA	NA	NA	0.007	NA	8.3295667
819	2	238243285	238243285	G	A	exonic	COL6A3	NA	synonymous SNV	COL6A3:NM_057166:exon38:c.C7392T:p.H2464H,COL6A3:NM_057167:exon40:c.C8595T:p.H2865H,COL6A3:NM_004369:exon41:c.C9213T:p.H3071H	exonic	ENSG00000163359	NA	synonymous SNV	ENSG00000163359:ENST00000472056:exon38:c.C7392T:p.H2464H,ENSG00000163359:ENST00000409809:exon39:c.C8595T:p.H2865H,ENSG00000163359:ENST00000346358:exon40:c.C8613T:p.H2871H,ENSG00000163359:ENST00000347401:exon40:c.C8610T:p.H2870H,ENSG00000163359:ENST00000353578:exon40:c.C8595T:p.H2865H,ENSG00000163359:ENST00000295550:exon41:c.C9213T:p.H3071H	Score=304;Name=lod=23	NA	2q37.3	NA	Name=PAX5-C20	NA	NA	rs2270671	0.1	0.1	0.09	0.100439	0.1272	0.0466	0.1153	0.0885	0.1339	0.13	0.04	0.14	0.08	0.1055	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.677637	NA	NA	0.105233	0.08965	NA	0.072	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000081024.3;CLNDSDB=.;CLNDSDBID=.	8.3287336
819	12	125299559	125299559	G	A	exonic	SCARB1	NA	nonsynonymous SNV	SCARB1:NM_001082959:exon3:c.C386T:p.S129L,SCARB1:NM_005505:exon3:c.C386T:p.S129L	exonic	ENSG00000073060	NA	nonsynonymous SNV	ENSG00000073060:ENST00000544327:exon2:c.C224T:p.S75L,ENSG00000073060:ENST00000261693:exon3:c.C386T:p.S129L,ENSG00000073060:ENST00000339570:exon3:c.C386T:p.S129L,ENSG00000073060:ENST00000415380:exon3:c.C386T:p.S129L,ENSG00000073060:ENST00000540495:exon3:c.C275T:p.S92L,ENSG00000073060:ENST00000541205:exon3:c.C263T:p.S88L,ENSG00000073060:ENST00000545493:exon3:c.C386T:p.S129L,ENSG00000073060:ENST00000546215:exon3:c.C386T:p.S129L	NA	NA	12q24.31	NA	NA	NA	NA	rs150222965	0.0005	0.0005	NA	0.00199681	NA	NA	0.0029	NA	0.0082	NA	NA	0.0028	NA	0.0028	0.0028	0.19	T	0.047	B	0.016	B	0.363	N	1.000	N	1.12	L	-0.65	T	-0.962	T	0.197	T	0.055	1.224	9.966	-4.44	-0.743	-0.241	5.646	1.224264	NA	0.16	0.001977	0.001135	NA	NA	NA	8.3285564
819	9	130479638	130479638	G	A	exonic	TTC16	NA	nonsynonymous SNV	TTC16:NM_144965:exon3:c.G217A:p.E73K	exonic	ENSG00000167094	NA	nonsynonymous SNV	ENSG00000167094:ENST00000373289:exon3:c.G217A:p.E73K	NA	NA	9q34.11	NA	NA	NA	NA	rs139753825	0.0005	0.0005	NA	0.000798722	0.002	NA	0.0029	NA	NA	0.0013	NA	NA	NA	0.0011	0.0019	0.65	T	0.925	P	0.626	P	0.096	N	1.000	N	1.115	L	0.66	T	-0.983	T	0.102	T	0.146	2.39	13.95	0.107	0.120	0.069	7.592	2.38965	2.38965	0.66	0.00186	0	NA	NA	NA	8.3283734
819	17	61898459	61898459	C	T	exonic	FTSJ3	NA	nonsynonymous SNV	FTSJ3:NM_017647:exon17:c.G1903A:p.G635S	exonic	ENSG00000108592	NA	nonsynonymous SNV	ENSG00000108592:ENST00000427159:exon17:c.G1903A:p.G635S	NA	NA	17q23.3	NA	Name=Pol2	NA	NA	rs141577537	0.0014	0.0014	NA	0.000599042	0.002	NA	0.0014	NA	NA	0.0026	NA	0.0028	NA	0.0012	0.0028	0.77	T	0.001	B	0.018	B	0.054	N	1.000	N	0	N	1.58	T	-0.997	T	0.026	T	0.116	1.825	12.06	-0.723	-0.226	-0.134	4.568	1.824566	1.824566	0.19	0.002209	0.000227	NA	NA	NA	8.3279244
819	5	1063998	1063998	G	A	exonic	SLC12A7	NA	synonymous SNV	SLC12A7:NM_006598:exon20:c.C2700T:p.Y900Y	exonic	ENSG00000113504	NA	synonymous SNV	ENSG00000113504:ENST00000264930:exon20:c.C2700T:p.Y900Y	Score=608;Name=lod=394	NA	5p15.33	NA	NA	NA	NA	rs7722287	0.32	0.32	0.316	0.296725	0.4523	0.3175	0.3588	0.0295	0.4325	0.47	0.31	0.38	0.04	0.418	0.47	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.896	T	0.000	T	.	0.457	6.481	3.37	0.773	2.387	7.506	0.456993	NA	NA	0.470233	0.10218	ID=COSM448401;OCCURENCE=1(breast)	0.058	NA	8.3261336
819	1	221057646	221057646	C	T	exonic	HLX	NA	nonsynonymous SNV	HLX:NM_021958:exon4:c.C1067T:p.P356L	exonic	ENSG00000136630	NA	nonsynonymous SNV	ENSG00000136630:ENST00000549319:exon2:c.C425T:p.P142L,ENSG00000136630:ENST00000366903:exon4:c.C1067T:p.P356L,ENSG00000136630:ENST00000427693:exon4:c.C266T:p.P89L	NA	NA	1q41	NA	NA	NA	NA	rs2738755	0.29	0.29	0.299	0.298722	0.34	0.0952	0.2911	0.4675	0.2434	0.34	0.1	0.27	0.45	0.3164	0.45	0.08	T	0.069	B	0.007	B	0.628	N	1.000	P	0.55	N	3.34	T	-0.965	T	0.000	T	0.122	0.652	7.496	2.02	0.264	0.957	7.008	0.651577	NA	0.02	0.350814	0.427599	NA	0.42	NA	8.3261194
819	11	5862532	5862532	A	C	exonic	OR52E6	NA	nonsynonymous SNV	OR52E6:NM_001005167:exon1:c.T596G:p.M199R	exonic	ENSG00000205409	NA	nonsynonymous SNV	ENSG00000205409:ENST00000329322:exon1:c.T596G:p.M199R,ENSG00000205409:ENST00000379946:exon2:c.T608G:p.M203R	NA	NA	11p15.4	NA	NA	NA	NA	rs10742809	0.34	0.34	0.334	0.328275	0.3439	0.4593	0.304	0.2224	0.3374	0.36	0.46	0.32	0.21	0.3378	0.46	0.1	T	0.0	B	0.005	B	0.607	N	0.015	P	0.385	N	8.75	T	-1.051	T	0.000	T	0.192	0.777	8.103	3.45	1.430	0.650	10.911	0.777055	NA	0.06	0.325885	0.234212	NA	0.341	NA	8.3257484
819	17	5084904	5084904	G	A	UTR3	ZNF594	NM_032530:c.*224C>T	NA	NA	UTR3	ENSG00000180626	ENST00000399604:c.*224C>T,ENST00000575779:c.*224C>T	NA	NA	NA	NA	17p13.2	NA	Name=KAP1,SETDB1	NA	NA	rs7220607	0.02	0.02	0.028	0.0267572	NA	0.001	0.0029	0.0983	0.001	NA	NA	0.0028	0.1	0.0076	0.1	0.03	D	.	.	.	.	.	.	1.000	N	.	.	.	.	-1.074	T	0.003	T	.	-0.963	0.32	0.937	0.195	-3.238	4.211	-0.962664	NA	0.11	NA	NA	NA	0.043	NA	8.3257334
820	2	113831941	113831941	G	A	exonic	IL1F10	NA	nonsynonymous SNV	IL1F10:NM_032556:exon2:c.G68A:p.R23K,IL1F10:NM_173161:exon3:c.G68A:p.R23K	exonic	ENSG00000136697	NA	nonsynonymous SNV	ENSG00000136697:ENST00000393197:exon2:c.G68A:p.R23K,ENSG00000136697:ENST00000341010:exon3:c.G68A:p.R23K	NA	NA	2q13	NA	NA	NA	NA	rs72827872	0.0005	0.0005	NA	0.00199681	0.001	NA	0.0043	NA	0.0061	NA	NA	0.0028	NA	0.0036	0.0048	0.58	T	0.001	B	0.001	B	0.026	N	1.000	N	1.445	L	1.38	T	-1.030	T	0.085	T	0.109	0.47	6.549	2.8	0.641	0.779	7.568	0.469618	NA	0.09	0.004767	0.001135	NA	0.065	NA	8.3239664
820	2	100915772	100915772	A	G	exonic	LONRF2	NA	nonsynonymous SNV	LONRF2:NM_198461:exon6:c.T1277C:p.L426P	exonic	ENSG00000170500	NA	nonsynonymous SNV	ENSG00000170500:ENST00000393437:exon6:c.T1277C:p.L426P,ENSG00000170500:ENST00000409647:exon6:c.T548C:p.L183P	NA	NA	2q11.2	NA	NA	NA	NA	rs4851287	0.78	0.78	0.776	0.771765	0.675	0.9405	0.7363	0.8903	0.5624	0.66	0.95	0.68	0.85	0.6918	0.95	0.3	T	0.0	B	0.0	B	0.066	N	1.000	P	-1.5	N	-1.85	D	-0.879	T	0.000	T	0.039	-1.017	0.236	3.96	0.878	1.729	7.131	-1.017352	NA	0.18	0.64407	0.833182	NA	0.703	NA	8.3224634
820	15	63433766	63433766	G	A	exonic	LACTB	NA	nonsynonymous SNV	LACTB:NM_032857:exon6:c.G1406A:p.R469K	exonic	ENSG00000103642	NA	nonsynonymous SNV	ENSG00000103642:ENST00000261893:exon6:c.G1406A:p.R469K	Score=433;Name=lod=77	NA	15q22.2	NA	NA	NA	NA	rs2729835	0.7	0.7	0.706	0.709864	0.6571	0.9891	0.5749	0.5719	0.7587	0.65	0.99	0.57	0.55	0.684	0.99	1	T	0.0	B	0.0	B	0.000	N	0.000	P	-1.355	N	1.14	T	-0.954	T	0.000	T	0.054	-0.247	2.811	4.49	0.486	3.610	8.228	-0.246928	NA	1	0.670349	0.606219	NA	0.63	NA	8.3218844
820	13	41533052	41533052	T	C	exonic	ELF1	NA	nonsynonymous SNV	ELF1:NM_001145353:exon2:c.A173G:p.N58S,ELF1:NM_172373:exon3:c.A173G:p.N58S	exonic	ENSG00000120690	NA	nonsynonymous SNV	ENSG00000120690:ENST00000442101:exon2:c.A173G:p.N58S,ENSG00000120690:ENST00000239882:exon3:c.A173G:p.N58S	Score=573;Name=lod=283	NA	13q14.11	NA	Name=JunD	Name=2	NA	rs7799	0.46	0.46	0.419	0.430511	0.7147	0.1746	0.67	0.1891	0.5583	0.73	0.19	0.64	0.22	0.6077	0.73	0.23	T	0.015	B	0.026	B	0.003	N	0.794	P	0.75	N	0.87	T	-0.996	T	0.000	T	0.005	2.3	13.65	0.352	0.148	0.041	9.591	2.299755	2.299755	0.11	0.689651	0.257149	ID=COSM1366882;OCCURENCE=1(large_intestine)	0.486	NA	8.3212824
820	22	38109227	38109227	C	G	exonic	TRIOBP	NA	nonsynonymous SNV	TRIOBP:NM_001039141:exon5:c.C265G:p.P89A	exonic	ENSG00000100106	NA	nonsynonymous SNV	ENSG00000100106:ENST00000406386:exon5:c.C265G:p.P89A	NA	NA	22q13.1	NA	NA	NA	NA	rs199646135	0.0009	0.0009	NA	0.000798722	NA	NA	0.0043	0.0008	NA	NA	NA	0.01	NA	0.0049	0.01	0	D	0.02	B	0.008	B	.	.	1.000	N	0.695	N	2.03	T	-1.004	T	0.021	T	0.21	1.453	10.8	-0.516	-0.048	0.408	4.03	1.453221	1.453221	0	0.008017	0.000529	NA	NA	NA	8.3204164
820	8	110457592	110457592	C	T	exonic	PKHD1L1	NA	nonsynonymous SNV	PKHD1L1:NM_177531:exon38:c.C5494T:p.P1832S	exonic	ENSG00000205038	NA	nonsynonymous SNV	ENSG00000205038:ENST00000378402:exon38:c.C5494T:p.P1832S	NA	NA	8q23.1	NA	NA	NA	NA	rs148982821	0.0023	0.0023	0.002	0.00139776	0.007	NA	NA	NA	NA	0.01	NA	0.0028	NA	0.0023	0.01	0.58	T	0.0	B	0.002	B	0.031	N	1.000	N	-0.805	N	-2.39	D	-0.829	T	0.199	T	0.122	-0.441	1.951	0.58	0.145	0.518	4.534	-0.441195	NA	0.08	0.003754	0.000517	NA	NA	NA	8.3202794
820	11	113267947	113267947	C	A	exonic	ANKK1	NA	nonsynonymous SNV	ANKK1:NM_178510:exon6:c.C840A:p.D280E	exonic	ENSG00000170209	NA	nonsynonymous SNV	ENSG00000170209:ENST00000303941:exon6:c.C840A:p.D280E	Score=304;Name=lod=23	NA	11q23.2	NA	NA	NA	NA	rs138608171	0.0018	0.0018	0.002	0.000998403	0.005	NA	NA	NA	NA	0.01	NA	NA	NA	0.0031	0.01	0.87	T	0.079	B	0.063	B	0.234	N	0.999	N	-0.32	N	1.56	T	-0.996	T	0.016	T	0.087	-0.222	2.925	-0.612	0.017	0.158	3.197	-0.22226	NA	0.72	0.005347	0.000476	NA	NA	NA	8.3198864
820	2	97030247	97030247	T	C	exonic	NCAPH	NA	nonsynonymous SNV	NCAPH:NM_015341:exon13:c.T1616C:p.V539A	exonic	ENSG00000121152	NA	nonsynonymous SNV	ENSG00000121152:ENST00000427946:exon12:c.T1208C:p.V403A,ENSG00000121152:ENST00000240423:exon13:c.T1616C:p.V539A,ENSG00000121152:ENST00000435975:exon13:c.T1583C:p.V528A,ENSG00000121152:ENST00000455200:exon13:c.T1583C:p.V528A	NA	NA	2q11.2	NA	NA	NA	NA	rs2305935	0.29	0.29	0.311	0.38099	0.3221	0.2758	0.3184	0.2806	0.7301	0.32	0.26	0.31	0.26	0.3577	0.34	0.79	T	0.0	B	0.0	B	0.022	N	1.000	P	-0.885	N	1.12	T	-0.967	T	0.000	T	0.165	-0.745	0.833	4.16	0.742	2.566	9.591	-0.74464	NA	0.76	0.335	0.283477	ID=COSM148906;OCCURENCE=1(stomach)	0.246	NA	8.3185334
820	9	78938186	78938186	G	C	exonic	PCSK5	NA	nonsynonymous SNV	PCSK5:NM_001190482:exon31:c.G4240C:p.E1414Q	exonic	ENSG00000099139	NA	nonsynonymous SNV	ENSG00000099139:ENST00000424854:exon25:c.G3340C:p.E1114Q,ENSG00000099139:ENST00000545128:exon31:c.G4240C:p.E1414Q	NA	NA	9q21.13	NA	NA	NA	NA	rs2803429	0.31	0.31	0.334	0.321685	0.3529	0.1369	0.2392	0.4667	0.3425	0.36	0.13	0.27	0.49	0.3244	0.49	0.56	T	.	.	.	.	0.266	N	1.000	P	0.96	L	1.67	T	-0.937	T	0.000	T	0.08	0.109	4.588	-5.44	-1.152	0.431	2.340	0.109191	NA	0.56	0.337519	0.451484	NA	0.283	NA	8.3185144
820	1	152282917	152282917	G	T	exonic	FLG	NA	nonsynonymous SNV	FLG:NM_002016:exon3:c.C4445A:p.S1482Y	exonic	ENSG00000143631	NA	nonsynonymous SNV	ENSG00000143631:ENST00000368799:exon3:c.C4445A:p.S1482Y	NA	NA	1q21.3	NA	NA	NA	NA	rs11204978	0.26	0.26	0.205	0.287141	0.1421	0.5823	0.3905	0.0113	0.4315	0.15	0.58	0.33	0.02	0.2287	0.58	1	T	0.767	P	0.341	B	.	.	1.000	P	2.555	M	3.8	T	-0.973	T	0.006	T	0.041	0.834	8.364	0.67	0.192	0.247	4.955	0.833852	NA	0.07	0.144186	0.036541	NA	0.174	NA	8.3183474
820	19	9577734	9577734	T	C	exonic	ZNF560	NA	nonsynonymous SNV	ZNF560:NM_152476:exon10:c.A1889G:p.Y630C	exonic	ENSG00000198028	NA	nonsynonymous SNV	ENSG00000198028:ENST00000301480:exon10:c.A1889G:p.Y630C	NA	NA	19p13.2	NA	NA	NA	NA	rs10416098	0.04	0.04	0.04	0.0523163	NA	0.001	0.0115	0.1914	NA	NA	0.0017	0.01	0.18	0.0152	0.18	1	T	0.0	B	0.001	B	.	.	1.000	P	-3.705	N	6.46	T	-0.949	T	0.000	T	0.047	-1.22	0.063	0.796	0.263	2.048	5.530	-1.219876	NA	1	0.001047	0.167953	NA	0.123	NA	8.3170864
820	12	49724153	49724153	T	A	exonic	TROAP	NA	nonsynonymous SNV	TROAP:NM_005480:exon13:c.T1525A:p.C509S	exonic	ENSG00000135451	NA	nonsynonymous SNV	ENSG00000135451:ENST00000547923:exon7:c.T649A:p.C217S,ENSG00000135451:ENST00000257909:exon13:c.T1525A:p.C509S,ENSG00000135451:ENST00000551245:exon13:c.T1525A:p.C509S	NA	NA	12q13.12	NA	NA	NA	NA	rs143183472	0.0018	0.0018	0.001	0.00219649	0.004	NA	NA	NA	0.0072	0.01	NA	NA	NA	0.0066	0.01	0.82	T	0.103	B	0.058	B	0.062	N	1.000	N	1.24	L	.	.	-1.026	T	0.051	T	0.169	1.225	9.971	-5.91	-0.919	-0.547	7.711	1.225472	NA	0.87	0.007093	0.000681	NA	NA	NA	8.3156404
820	1	17030590	17030590	G	A	ncRNA_exonic	ESPNP	NA	NA	NA	ncRNA_exonic	ENSG00000268869	NA	NA	NA	Score=538;Name=lod=205	NA	1p36.13	Score=838;Name=V$OCT1_Q6	Name=ZNF263	Name=20	NA	rs590170	NA	NA	0.285	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3515	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.311418	NA	NA	NA	NA	NA	0.188	NA	8.3151666
821	19	36530343	36530343	C	T	exonic	THAP8	NA	nonsynonymous SNV	THAP8:NM_152658:exon3:c.G554A:p.R185Q	exonic	ENSG00000161277	NA	nonsynonymous SNV	ENSG00000161277:ENST00000538849:exon2:c.G119A:p.R40Q,ENSG00000161277:ENST00000292894:exon3:c.G554A:p.R185Q	NA	NA	19q13.12	NA	NA	NA	NA	rs10421966	0.3	0.3	0.301	0.258387	0.33	0.3274	0.2233	0.2239	0.1851	0.34	0.34	0.25	0.25	0.3921	0.34	0.49	T	0.0	B	0.0	B	0.884	N	1.000	P	0.205	N	1.87	T	-1.115	T	0.000	T	0.026	1.472	10.87	-5.09	-1.335	-0.273	12.629	1.471684	1.471684	0.43	0.297957	0.213006	NA	0.181	NA	8.3132764
821	8	73982161	73982161	A	G	exonic	SBSPON	NA	nonsynonymous SNV	SBSPON:NM_153225:exon4:c.T556C:p.W186R	exonic	ENSG00000164764	NA	nonsynonymous SNV	ENSG00000164764:ENST00000297354:exon4:c.T556C:p.W186R	Score=343;Name=lod=33	NA	8q21.11	NA	NA	NA	NA	rs2291219	0.55	0.55	0.557	0.575679	0.6779	0.2937	0.4697	0.7398	0.6145	0.68	0.25	0.5	0.74	0.637	0.74	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-1.955	N	2.01	T	-0.963	T	0.000	T	0.04	-1.784	0.01	3.22	0.125	2.568	6.948	-1.783795	NA	1	0.70572	0.737976	NA	0.551	NA	8.3127134
821	8	10390452	10390452	C	T	exonic	PRSS55	NA	nonsynonymous SNV	PRSS55:NM_001197020:exon4:c.C635T:p.A212V,PRSS55:NM_198464:exon4:c.C635T:p.A212V	exonic	ENSG00000184647	NA	nonsynonymous SNV	ENSG00000184647:ENST00000328655:exon4:c.C635T:p.A212V,ENSG00000184647:ENST00000522210:exon4:c.C635T:p.A212V	NA	NA	8p23.1	NA	NA	NA	NA	rs4406360	0.34	0.34	0.343	0.341254	0.334	0.4266	0.3329	0.2224	0.4274	0.35	0.41	0.35	0.26	0.3427	0.41	0.43	T	0.108	B	0.015	B	0.378	N	1.000	P	-0.08	N	-3.04	D	-1.048	T	0.000	T	0.059	0.625	7.36	-4.08	-0.461	-0.579	7.151	0.624582	NA	0.89	0.344419	0.246255	NA	0.362	NA	8.3122144
821	1	225152253	225152253	C	T	exonic	DNAH14	NA	nonsynonymous SNV	DNAH14:NM_001145154:exon5:c.C440T:p.P147L,DNAH14:NM_001373:exon5:c.C440T:p.P147L,DNAH14:NM_144989:exon5:c.C440T:p.P147L	exonic	ENSG00000185842	NA	nonsynonymous SNV	ENSG00000185842:ENST00000366848:exon4:c.C440T:p.P147L,ENSG00000185842:ENST00000439375:exon4:c.C440T:p.P147L,ENSG00000185842:ENST00000366849:exon5:c.C440T:p.P147L,ENSG00000185842:ENST00000366850:exon5:c.C440T:p.P147L,ENSG00000185842:ENST00000400952:exon5:c.C440T:p.P147L,ENSG00000185842:ENST00000430092:exon5:c.C440T:p.P147L,ENSG00000185842:ENST00000445597:exon6:c.C821T:p.P274L	NA	NA	1q42.12	NA	NA	NA	NA	rs41267349	0.0027	0.0027	NA	0.00359425	0.0089	NA	0.0043	0.0038	0.001	0.01	NA	0.0028	NA	0.0059	0.01	0.06	T	0.059	B	0.027	B	0.717	N	1.000	N	.	.	2.27	T	-1.027	T	0.037	T	0.274	1.792	11.95	0.603	0.254	1.321	2.194	1.792051	1.792051	0.08	0.006522	0.003625	NA	NA	NA	8.3120114
821	7	76903926	76903926	T	C	exonic	CCDC146	NA	nonsynonymous SNV	CCDC146:NM_020879:exon11:c.T1397C:p.I466T	exonic	ENSG00000135205	NA	nonsynonymous SNV	ENSG00000135205:ENST00000431197:exon10:c.T539C:p.I180T,ENSG00000135205:ENST00000285871:exon11:c.T1397C:p.I466T	Score=346;Name=lod=34	NA	7q11.23	NA	NA	NA	NA	rs58545343	0.03	0.03	0.028	0.034345	0.004	0.001	0.0101	0.1082	0.0174	0.004	NA	0.01	0.1	0.0133	0.1	0.56	T	0.0	B	0.001	B	0.462	N	0.995	N	-0.205	N	1.62	T	-1.001	T	0.001	T	0.029	-0.169	3.175	0.702	0.127	0.388	9.306	-0.16909	NA	0.28	0.004419	0.081934	NA	0.022	NA	8.3116144
821	2	131520178	131520178	C	G	exonic	AMER3	NA	nonsynonymous SNV	AMER3:NM_001105193:exon2:c.C533G:p.A178G,AMER3:NM_001105194:exon2:c.C533G:p.A178G,AMER3:NM_001105195:exon2:c.C533G:p.A178G,AMER3:NM_152698:exon2:c.C533G:p.A178G	exonic	ENSG00000178171	NA	nonsynonymous SNV	ENSG00000178171:ENST00000321420:exon2:c.C533G:p.A178G,ENSG00000178171:ENST00000423981:exon2:c.C533G:p.A178G,ENSG00000178171:ENST00000458606:exon2:c.C533G:p.A178G	NA	NA	2q21.1	NA	NA	NA	NA	rs77687733	0.15	0.15	0.136	0.125399	0.1879	0.1379	0.2839	0.0083	0.0941	0.19	0.15	0.28	0.01	0.1674	0.28	0.31	T	0.8	P	0.313	B	0.837	N	1.000	P	0.55	N	0.84	T	-1.079	T	0.000	T	0.084	0.277	5.497	-4.14	-0.631	-0.164	4.306	0.276733	NA	0.16	0.167909	0.035876	NA	0.101	NA	8.3101244
821	19	56156447	56156447	A	G	exonic	ZNF581	NA	synonymous SNV	ZNF581:NM_016535:exon2:c.A510G:p.E170E	exonic	ENSG00000171425	NA	synonymous SNV	ENSG00000171425:ENST00000270451:exon2:c.A510G:p.E170E,ENSG00000171425:ENST00000587252:exon2:c.A510G:p.E170E,ENSG00000171425:ENST00000588537:exon2:c.A510G:p.E170E	Score=378;Name=lod=46	NA	19q13.42	NA	Name=ERalpha_a	Name=7	NA	rs11084406	0.06	0.06	0.062	0.0559105	0.1093	0.0069	0.0778	0.0174	0.0879	0.09	0.01	0.09	0.03	0.1047	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.13665	NA	NA	0.14314	0.03586	NA	0.116	NA	8.3095266
821	21	45107766	45107766	G	A	exonic	RRP1B	NA	nonsynonymous SNV	RRP1B:NM_015056:exon13:c.G1511A:p.G504D	exonic	ENSG00000160208	NA	nonsynonymous SNV	ENSG00000160208:ENST00000340648:exon13:c.G1511A:p.G504D	NA	NA	21q22.3	NA	NA	NA	NA	rs61737067	0.05	0.05	0.066	0.0642971	0.004	NA	0.0259	0.2269	NA	0.0013	NA	0.03	0.2	0.0186	0.2	0	D	0.037	B	0.007	B	0.692	N	1.000	P	0.345	N	1.56	T	-1.009	T	0.000	T	0.014	0.632	7.397	1.59	0.423	0.421	4.506	0.632044	NA	0.65	0.001748	0.176364	NA	0.087	NA	8.3089854
821	12	114404143	114404143	C	T	UTR5	RBM19	NM_001146699:c.-111G>A,NM_016196:c.-111G>A,NM_001146698:c.-111G>A	NA	NA	UTR5	ENSG00000122965	ENST00000261741:c.-111G>A	NA	NA	Score=300;Name=lod=22	NA	12q24.21	Score=960;Name=V$USF_C	Name=p300,CTCF,RXRA,GTF2F1_(RAP-74),ELF1_(SC-631),STAT1,Max,Oct-2,Pol2(phosphoS2),Mxi1_(bHLH),ATF3,SP1,Pol2,USF1_(SC-8983),YY1_(C-20),ETS1,TAF1,GABP,USF2,HMGN3,POU2F2,Nrf1,USF-1,IRF1,TBP,ZEB1_(SC-25388),HEY1,NFKB,AP-2gamma,CCNT2,c-Myc,SRF,PAX5-C20,YY1,Pol2-4H8,HA-E2F1,Sin3Ak-20,Pol2(b),ELK4,FOXA1_(C-20)	Name=148	NA	rs2290798	0.08	0.08	0.062	0.077476	0.0268	0.1131	0.2421	0.0461	0.0184	0.03	0.13	0.19	0.03	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.210729	NA	NA	NA	NA	NA	0.029	NA	8.3065334
821	9	123780005	123780005	G	A	exonic	C5	NA	synonymous SNV	C5:NM_001735:exon13:c.C1632T:p.Y544Y	exonic	ENSG00000106804	NA	synonymous SNV	ENSG00000106804:ENST00000223642:exon13:c.C1632T:p.Y544Y	Score=463;Name=lod=102	NA	9q33.2	Score=771;Name=V$PAX2_01	Name=GATA3_(SC-268)	Name=4	NA	rs25681	0.41	0.41	0.363	0.405751	0.4592	0.5724	0.5	0.0295	0.6207	0.47	0.58	0.5	0.04	0.457	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.815529	NA	NA	0.445	0.089424	ID=COSM1459729;OCCURENCE=1(large_intestine)	0.348	NA	8.3054666
821	17	41244000	41244000	T	C	exonic	BRCA1	NA	nonsynonymous SNV	BRCA1:NM_007297:exon9:c.A3407G:p.K1136R,BRCA1:NM_007294:exon10:c.A3548G:p.K1183R,BRCA1:NM_007300:exon10:c.A3548G:p.K1183R	exonic	ENSG00000012048	NA	nonsynonymous SNV	ENSG00000012048:ENST00000309486:exon9:c.A2660G:p.K887R,ENSG00000012048:ENST00000493795:exon9:c.A3407G:p.K1136R,ENSG00000012048:ENST00000346315:exon10:c.A3548G:p.K1183R,ENSG00000012048:ENST00000354071:exon10:c.A3548G:p.K1183R,ENSG00000012048:ENST00000357654:exon10:c.A3548G:p.K1183R,ENSG00000012048:ENST00000471181:exon10:c.A3548G:p.K1183R	NA	NA	17q21.31	NA	NA	NA	NA	rs16942	0.32	0.32	0.3	0.352636	0.3549	0.371	0.3746	0.2179	0.498	0.36	0.33	0.4	0.22	0.349	0.4	1	T	0.0	B	0.002	B	0.152	N	1.000	P	-1.085	N	-0.35	T	-1.024	T	0.000	T	0.258	-2.282	0.004	-2.35	-0.437	-0.365	7.827	-2.282426	NA	1	0.324419	0.238311	ID=COSM148277;OCCURENCE=1(stomach)	0.275	CLINSIG=non-pathogenic|non-pathogenic|non-pathogenic|untested|non-pathogenic;CLNDBN=not_provided|BRCA1_and_BRCA2_Hereditary_Breast_and_Ovarian_Cancer|Breast-ovarian_cancer\x2c_familial_1|not_specified|Neoplastic_Syndromes\x2c_Hereditary;CLNREVSTAT=mult|single|mult|not|single;CLNACC=RCV000034742.2|RCV000048229.3|RCV000112115.2|RCV000120278.1|RCV000128991.1;CLNDSDB=.|GeneReviews:MedGen|GeneReviews:MedGen:OMIM:Orphanet|.|MedGen;CLNDSDBID=.|NBK1247:C0677776|NBK1247:C2676676:604370:ORPHA145|.|C0027672	8.3050144
822	9	78938043	78938043	G	A	exonic	PCSK5	NA	nonsynonymous SNV	PCSK5:NM_001190482:exon31:c.G4097A:p.R1366H	exonic	ENSG00000099139	NA	nonsynonymous SNV	ENSG00000099139:ENST00000424854:exon25:c.G3197A:p.R1066H,ENSG00000099139:ENST00000545128:exon31:c.G4097A:p.R1366H	NA	NA	9q21.13	Score=845;Name=V$GR_Q6	NA	NA	NA	rs2495207	0.31	0.31	0.344	0.320487	0.3529	0.1369	0.2349	0.4667	0.3395	0.36	0.13	0.27	0.49	0.3385	0.49	0.14	T	.	.	.	.	0.684	N	1.000	P	1.91	M	1.6	T	-0.908	T	0.000	T	0.074	1.977	12.57	-1.45	0.077	-0.184	7.608	1.9769	1.9769	0.06	0.338021	0.452626	NA	0.283	NA	8.3039124
822	19	610273	610273	G	A	exonic	HCN2	NA	synonymous SNV	HCN2:NM_001194:exon5:c.G1452A:p.E484E	exonic	ENSG00000099822	NA	synonymous SNV	ENSG00000099822:ENST00000251287:exon5:c.G1452A:p.E484E	Score=584;Name=lod=314	NA	19p13.3	NA	Name=ERalpha_a	Name=26	NA	rs34397648	0.08	0.08	0.066	0.0974441	0.1262	0.0099	0.1758	0.0688	0.1411	0.13	0.01	0.14	0.06	0.117	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.216797	NA	NA	0.122442	0.071266	NA	0.123	NA	8.3010246
822	21	39671199	39671199	A	G	exonic	KCNJ15	NA	nonsynonymous SNV	KCNJ15:NM_001276438:exon3:c.A16G:p.I6V,KCNJ15:NM_170736:exon3:c.A16G:p.I6V,KCNJ15:NM_170737:exon3:c.A16G:p.I6V,KCNJ15:NM_001276437:exon4:c.A16G:p.I6V,KCNJ15:NM_001276439:exon4:c.A16G:p.I6V,KCNJ15:NM_002243:exon4:c.A16G:p.I6V,KCNJ15:NM_001276435:exon5:c.A16G:p.I6V,KCNJ15:NM_001276436:exon5:c.A16G:p.I6V	exonic	ENSG00000157551	NA	nonsynonymous SNV	ENSG00000157551:ENST00000419868:exon2:c.A16G:p.I6V,ENSG00000157551:ENST00000398927:exon3:c.A16G:p.I6V,ENSG00000157551:ENST00000398934:exon3:c.A16G:p.I6V,ENSG00000157551:ENST00000398938:exon3:c.A16G:p.I6V,ENSG00000157551:ENST00000438657:exon3:c.A16G:p.I6V,ENSG00000157551:ENST00000547595:exon3:c.A16G:p.I6V,ENSG00000157551:ENST00000548700:exon3:c.A16G:p.I6V,ENSG00000157551:ENST00000328656:exon4:c.A16G:p.I6V,ENSG00000157551:ENST00000398928:exon4:c.A16G:p.I6V,ENSG00000157551:ENST00000398930:exon4:c.A16G:p.I6V,ENSG00000157551:ENST00000398932:exon4:c.A16G:p.I6V,ENSG00000157551:ENST00000551422:exon4:c.A16G:p.I6V,ENSG00000157551:ENST00000398925:exon5:c.A16G:p.I6V,ENSG00000157551:ENST00000417042:exon5:c.A16G:p.I6V,ENSG00000157551:ENST00000547341:exon5:c.A16G:p.I6V,ENSG00000157551:ENST00000549932:exon5:c.A16G:p.I6V,ENSG00000157551:ENST00000549158:exon6:c.A16G:p.I6V,ENSG00000157551:ENST00000443341:exon7:c.A16G:p.I6V,ENSG00000157551:ENST00000549805:exon7:c.A16G:p.I6V	NA	NA	21q22.13	NA	NA	NA	NA	rs79109585	0.0046	0.0046	0.002	0.00279553	0.0109	0.001	NA	0.0015	NA	0.01	NA	NA	NA	0.0089	0.013	0.75	T	0.0	B	0.0	B	0.001	N	1.000	N	0.345	N	0.82	T	-0.359	T	0.433	T	0.199	-1.108	0.136	-2.5	-0.633	0.021	2.482	-1.108274	NA	0.28	0.012558	0.002724	NA	NA	NA	8.3009754
822	8	144621084	144621084	T	G	exonic	ZC3H3	NA	nonsynonymous SNV	ZC3H3:NM_015117:exon2:c.A453C:p.E151D	exonic	ENSG00000014164	NA	nonsynonymous SNV	ENSG00000014164:ENST00000262577:exon2:c.A453C:p.E151D	NA	NA	8q24.3	NA	NA	NA	NA	rs3750207	0.39	0.39	0.398	0.416534	0.3479	0.2133	0.4654	0.5779	0.4438	0.37	0.24	0.44	0.56	0.3693	0.56	1	T	0.0	B	0.0	B	0.221	N	1.000	P	-1.7	N	4.26	T	-1.013	T	0.000	T	0.033	-2.25	0.004	-2.42	-0.336	-2.351	2.072	-2.250215	NA	1	0.316457	0.52634	NA	0.399	NA	8.2996764
822	2	63401820	63401820	T	C	exonic	WDPCP	NA	nonsynonymous SNV	WDPCP:NM_015910:exon15:c.A2063G:p.N688S	exonic	ENSG00000143951	NA	nonsynonymous SNV	ENSG00000143951:ENST00000398544:exon9:c.A1586G:p.N529S,ENSG00000143951:ENST00000409120:exon9:c.A1487G:p.N496S,ENSG00000143951:ENST00000409199:exon9:c.A1487G:p.N496S,ENSG00000143951:ENST00000272321:exon15:c.A2063G:p.N688S	NA	NA	2p15	NA	NA	NA	NA	rs61734468	0.0046	0.0046	0.001	0.00299521	0.007	NA	0.0043	NA	0.0051	0.01	NA	0.01	NA	0.0099	0.017	0.59	T	0.002	B	0.003	B	0.420	N	1.000	N	0.895	L	-0.06	T	-1.031	T	0.094	T	0.006	-0.217	2.949	2.75	0.871	0.137	6.046	-0.217137	NA	0.02	0.016883	0.003254	NA	0.007	NA	8.2995504
822	9	33558113	33558113	C	G	exonic	ANKRD18B	NA	nonsynonymous SNV	ANKRD18B:NM_001244752:exon12:c.C2199G:p.D733E	exonic	ENSG00000230453	NA	nonsynonymous SNV	ENSG00000230453:ENST00000357927:exon4:c.C345G:p.D115E,ENSG00000230453:ENST00000290943:exon12:c.C2202G:p.D734E	NA	NA	9p13.3	NA	NA	NA	NA	rs142538183	0.01	0.01	0.005	0.0071885	0.0169	NA	0.0216	NA	0.0041	0.01	NA	0.03	NA	0.0172	0.03	1	T	.	.	.	.	.	.	1.000	N	.	.	3.31	T	-0.972	T	0.007	T	0.025	-1.864	0.008	-0.345	-0.108	-2.396	2.953	-1.863676	NA	0.96	NA	NA	NA	0.014	NA	8.2992334
822	19	50475208	50475208	C	T	ncRNA_intronic	SIGLEC16	NA	NA	NA	ncRNA_exonic	ENSG00000161643	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs12462966	0.21	0.21	0.15	0.195487	0.1789	0.3323	0.1571	0.1717	0.1309	0.17	0.3	0.17	0.19	0.1893	0.3	0.1	T	.	.	.	.	0.008	N	1.000	P	.	.	.	.	-1.037	T	0.000	T	.	-0.091	3.555	-3.83	-1.365	-2.417	0.579	-0.090883	NA	0.21	NA	NA	NA	0.116	NA	8.2984666
822	18	12308793	12308793	G	C	exonic	TUBB6	NA	synonymous SNV	TUBB6:NM_032525:exon2:c.G165C:p.S55S	exonic	ENSG00000176014	NA	synonymous SNV	ENSG00000176014:ENST00000317702:exon2:c.G165C:p.S55S,ENSG00000176014:ENST00000586653:exon2:c.G165C:p.S55S,ENSG00000176014:ENST00000586810:exon2:c.G165C:p.S55S,ENSG00000176014:ENST00000590103:exon2:c.G165C:p.S55S,ENSG00000176014:ENST00000590388:exon2:c.G165C:p.S55S,ENSG00000176014:ENST00000590967:exon2:c.G165C:p.S55S,ENSG00000176014:ENST00000591208:exon2:c.G165C:p.S55S,ENSG00000176014:ENST00000591909:exon2:c.G165C:p.S55S,ENSG00000176014:ENST00000592683:exon2:c.G165C:p.S55S,ENSG00000176014:ENST00000590693:exon3:c.G165C:p.S55S	NA	NA	18p11.21	Score=943;Name=V$AP1_01	Name=BATF,FOSL1_(SC-183),E2F6,eGFP-JunD,Pol2(phosphoS2),PU.1,Pol2,E2F4,E2F6_(H-50),TAF1,TBP,TCF12,eGFP-FOS,HEY1,AP-2gamma,c-Myc,c-Fos,E2F1,HDAC2_(SC-6296),c-Jun,Sin3Ak-20,HA-E2F1,NANOG_(SC-33759),Ini1,AP-2alpha,FOSL2,JunD,eGFP-JunB	Name=141	NA	rs11267036	0.14	0.14	0.128	0.129393	0.1322	0.1478	0.1801	0.084	0.1329	0.14	0.17	0.16	0.09	0.1243	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.253232	NA	NA	0.112558	0.080799	NA	0.181	NA	8.2976086
822	19	57066013	57066013	C	T	exonic	ZFP28	NA	nonsynonymous SNV	ZFP28:NM_020828:exon8:c.C1859T:p.A620V	exonic	ENSG00000196867	NA	nonsynonymous SNV	ENSG00000196867:ENST00000301318:exon8:c.C1859T:p.A620V	NA	NA	19q13.43	NA	Name=ZNF274	NA	NA	rs10409531	0.37	0.37	0.391	0.408946	0.3509	0.2986	0.304	0.5953	0.4049	0.35	0.28	0.31	0.58	0.3522	0.58	0.13	T	0.261	B	0.133	B	0.043	N	1.000	P	0.535	N	3.17	T	-1.010	T	0.000	T	0.071	1.567	11.19	0.896	0.536	-1.939	6.573	1.566773	1.566773	0.28	0.333372	0.551975	ID=COSM148775;OCCURENCE=1(stomach)	0.428	NA	8.2968614
822	19	36207510	36207510	G	A	exonic	ZBTB32	NA	synonymous SNV	ZBTB32:NM_014383:exon6:c.G1320A:p.L440L	exonic	ENSG00000011590	NA	synonymous SNV	ENSG00000011590:ENST00000262630:exon6:c.G1320A:p.L440L,ENSG00000011590:ENST00000392197:exon7:c.G1320A:p.L440L	Score=613;Name=lod=414	NA	19q13.12	NA	Name=E2F6_(H-50),TAF1,Pol2,E2F6,YY1_(C-20),Max,Pol2-4H8,c-Myc,USF-1,Nrf1	Name=24	NA	rs1052491	0.05	0.05	0.044	0.0417332	0.1272	NA	0.0591	0.0068	0.0317	0.11	NA	0.06	0.01	0.1006	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.725828	1.725828	NA	0.143638	0.032683	NA	0.014	NA	8.2952286
823	9	96026243	96026243	G	A	exonic	WNK2	NA	synonymous SNV	WNK2:NM_006648:exon15:c.G3624A:p.T1208T	exonic	ENSG00000165238	NA	synonymous SNV	ENSG00000165238:ENST00000297954:exon15:c.G3624A:p.T1208T,ENSG00000165238:ENST00000349097:exon15:c.G2460A:p.T820T,ENSG00000165238:ENST00000395477:exon15:c.G3624A:p.T1208T,ENSG00000165238:ENST00000427277:exon15:c.G2460A:p.T820T	NA	NA	9q22.31	NA	NA	NA	NA	rs55981123	0.11	0.11	0.108	0.102636	0.1431	0.001	0.1124	0.1762	0.0593	0.14	0.0017	0.12	0.18	0.1101	0.18	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.074	T	0.000	T	.	1.059	9.325	-10.3	-2.243	-1.789	4.501	1.058954	NA	NA	0.119186	0.164775	ID=COSM1463684,COSM1463683;OCCURENCE=1(large_intestine)	0.109	NA	8.2942806
823	19	58850357	58850357	G	A	exonic	ZSCAN22	NA	nonsynonymous SNV	ZSCAN22:NM_181846:exon3:c.G1141A:p.E381K	exonic	ENSG00000182318	NA	nonsynonymous SNV	ENSG00000182318:ENST00000329665:exon3:c.G1141A:p.E381K	NA	NA	19q13.43	NA	NA	NA	NA	rs138944686	0.02	0.02	0.019	0.013778	0.0209	NA	0.0202	0.025	0.001	0.02	NA	0.02	0.03	0.0087	0.03	0.32	T	0.168	B	0.012	B	.	.	1.000	N	-0.91	N	3.28	T	-0.933	T	0.002	T	0.076	0.801	8.214	0.353	0.344	-2.584	0.724	0.801043	NA	0.02	0.010116	0.01566	NA	0.014	NA	8.2936174
823	10	50122181	50122181	C	A	exonic	LRRC18	NA	nonsynonymous SNV	LRRC18:NM_001006939:exon1:c.G20T:p.G7V	exonic	ENSG00000165383	NA	nonsynonymous SNV	ENSG00000165383:ENST00000374160:exon1:c.G20T:p.G7V,ENSG00000165383:ENST00000298124:exon2:c.G20T:p.G7V	Score=489;Name=lod=130	NA	10q11.23	Score=816;Name=V$HNF4_01	NA	NA	NA	rs7094610	0.37	0.37	0.364	0.363019	0.339	0.7202	0.2925	0.0772	0.456	0.34	0.71	0.31	0.09	0.3558	0.71	.	.	0.034	B	0.019	B	0.305	N	0.000	P	1.085	L	0.53	T	-0.959	T	0.000	T	0.067	0.247	5.337	0.75	-0.111	0.085	14.460	0.247427	NA	0.29	0.345698	0.113255	NA	0.355	NA	8.2928354
823	3	184550501	184550501	A	G	exonic	VPS8	NA	nonsynonymous SNV	VPS8:NM_001009921:exon4:c.A247G:p.I83V,VPS8:NM_015303:exon4:c.A247G:p.I83V	exonic	ENSG00000156931	NA	nonsynonymous SNV	ENSG00000156931:ENST00000452666:exon2:c.A94G:p.I32V,ENSG00000156931:ENST00000424463:exon3:c.A247G:p.I83V,ENSG00000156931:ENST00000287546:exon4:c.A247G:p.I83V,ENSG00000156931:ENST00000436792:exon4:c.A247G:p.I83V,ENSG00000156931:ENST00000437079:exon4:c.A247G:p.I83V,ENSG00000156931:ENST00000441141:exon4:c.A247G:p.I83V,ENSG00000156931:ENST00000445089:exon4:c.A247G:p.I83V,ENSG00000156931:ENST00000446204:exon4:c.A247G:p.I83V,ENSG00000156931:ENST00000422105:exon5:c.A247G:p.I83V	Score=514;Name=lod=163	NA	3q27.2	NA	NA	NA	NA	rs9830734	0.51	0.51	0.509	0.553914	0.3151	0.6657	0.4452	0.7103	0.5501	0.33	0.64	0.47	0.68	0.4371	0.68	0.43	T	0.0	B	0.001	B	0.002	N	0.998	P	0	N	2.27	T	-1.023	T	0.000	T	0.051	-0.682	1.03	2.98	0.093	0.871	8.947	-0.682044	NA	1	0.288681	0.646887	NA	0.565	NA	8.2924524
823	5	96116808	96116808	G	A	exonic	ERAP1	NA	synonymous SNV	ERAP1:NM_001040458:exon17:c.C2542T:p.L848L,ERAP1:NM_001198541:exon17:c.C2542T:p.L848L,ERAP1:NM_016442:exon17:c.C2542T:p.L848L	exonic	ENSG00000164307	NA	synonymous SNV	ENSG00000164307:ENST00000296754:exon17:c.C2542T:p.L848L,ENSG00000164307:ENST00000443439:exon17:c.C2542T:p.L848L	NA	NA	5q15	Score=829;Name=V$HNF1_C	Name=c-Jun,c-Fos	Name=108	NA	rs17481856	0.06	0.06	0.052	0.0597045	0.1382	NA	0.1138	0.0053	0.0757	0.13	NA	0.12	0.01	0.1011	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.529771	NA	NA	0.13593	0.023377	NA	0.159	NA	8.2914366
823	19	7573297	7573297	T	C	exonic	C19orf45	NA	nonsynonymous SNV	C19orf45:NM_198534:exon9:c.T1499C:p.L500P	exonic	ENSG00000198723	NA	nonsynonymous SNV	ENSG00000198723:ENST00000361664:exon9:c.T1499C:p.L500P	NA	NA	19p13.2	Score=812;Name=V$CDPCR3_01	NA	NA	NA	rs608144	0.33	0.33	0.323	0.300919	0.3618	0.1746	0.3847	0.3434	0.2515	0.37	0.2	0.42	0.37	0.3254	0.42	1	T	0.0	B	0.0	B	0.002	N	0.951	P	-1.905	N	3.14	T	-0.934	T	0.000	T	0.095	-2.673	0	2.58	0.543	0.574	4.738	-2.672641	NA	1	0.355349	0.335377	NA	0.413	NA	8.2907844
823	2	113832333	113832333	C	A	exonic	IL1F10	NA	nonsynonymous SNV	IL1F10:NM_032556:exon3:c.C152A:p.A51D,IL1F10:NM_173161:exon4:c.C152A:p.A51D	exonic	ENSG00000136697	NA	nonsynonymous SNV	ENSG00000136697:ENST00000337569:exon3:c.C152A:p.A51D,ENSG00000136697:ENST00000393197:exon3:c.C152A:p.A51D,ENSG00000136697:ENST00000341010:exon4:c.C152A:p.A51D	Score=473;Name=lod=112	NA	2q13	NA	NA	NA	NA	rs6743376	0.7	0.7	0.684	0.725439	0.6938	0.6825	0.7118	0.7322	0.8027	0.69	0.7	0.69	0.74	0.6931	0.78	0.88	T	0.0	B	0.0	B	0.175	N	1.000	P	-1.805	N	2.36	T	-0.994	T	0.000	T	0.038	-0.247	2.81	3.91	0.348	2.133	5.787	-0.247094	NA	1	0.655814	0.728779	NA	0.717	NA	8.2906194
823	1	228464276	228464276	T	C	exonic	OBSCN	NA	nonsynonymous SNV	OBSCN:NM_001098623:exon22:c.T6346C:p.F2116L,OBSCN:NM_052843:exon22:c.T6346C:p.F2116L,OBSCN:NM_001271223:exon26:c.T7471C:p.F2491L	exonic	ENSG00000154358	NA	nonsynonymous SNV	ENSG00000154358:ENST00000359599:exon11:c.T2887C:p.F963L,ENSG00000154358:ENST00000284548:exon22:c.T6346C:p.F2116L,ENSG00000154358:ENST00000422127:exon22:c.T6346C:p.F2116L,ENSG00000154358:ENST00000570156:exon26:c.T7471C:p.F2491L	Score=265;Name=lod=16	NA	1q42.13	NA	Name=E2F6_(H-50)	NA	NA	rs1188722	0.69	0.69	0.649	0.663538	0.663	0.75	0.6931	0.733	0.4601	0.66	0.73	0.69	0.68	0.6843	0.73	1	T	0.001	B	0.001	B	0.001	N	0.000	P	-2.96	N	3.98	T	-0.984	T	0.000	T	0.115	1.103	9.5	4.23	0.593	0.888	11.771	1.103008	NA	1	0.695965	0.734574	NA	0.543	NA	8.2900684
823	17	73570695	73570695	G	A	exonic	LLGL2	NA	nonsynonymous SNV	LLGL2:NM_001031803:exon25:c.G3001A:p.G1001S	exonic	ENSG00000073350	NA	nonsynonymous SNV	ENSG00000073350:ENST00000392550:exon25:c.G3001A:p.G1001S,ENSG00000073350:ENST00000577200:exon25:c.G3001A:p.G1001S	NA	NA	17q25.1	NA	NA	NA	NA	rs35886912	0.0037	0.0037	0.002	0.00459265	0.0119	NA	0.0086	0.0023	0.002	0.01	NA	0.01	0.0041	0.0132	0.019	0.8	T	0.043	B	0.011	B	0.085	N	1.000	N	.	.	3.69	T	-0.909	T	0.004	T	0.172	-0.506	1.685	1.42	0.243	-1.024	10.525	-0.505524	NA	0.48	0.018837	0.004993	NA	NA	NA	8.2893964
823	16	89350911	89350911	G	C	exonic	ANKRD11	NA	nonsynonymous SNV	ANKRD11:NM_001256183:exon9:c.C2039G:p.T680S,ANKRD11:NM_013275:exon9:c.C2039G:p.T680S,ANKRD11:NM_001256182:exon10:c.C2039G:p.T680S	exonic	ENSG00000167522	NA	nonsynonymous SNV	ENSG00000167522:ENST00000301030:exon9:c.C2039G:p.T680S,ENSG00000167522:ENST00000378330:exon10:c.C2039G:p.T680S	NA	NA	16q24.3	NA	NA	NA	NA	rs145694621	0.01	0.01	0.006	0.00439297	0.0139	NA	0.0014	NA	0.0072	0.02	NA	NA	NA	0.0109	0.02	0.73	T	0.003	B	0.003	B	0.405	N	1.000	N	0.755	N	1.29	T	-1.056	T	0.023	T	0.033	-1.566	0.015	-3.35	-0.366	0.687	1.940	-1.565862	NA	0	0.019302	0.003185	NA	NA	NA	8.2892314
823	1	167825449	167825449	T	C	exonic	ADCY10	NA	nonsynonymous SNV	ADCY10:NM_001167749:exon14:c.A1666G:p.I556V,ADCY10:NM_018417:exon17:c.A2125G:p.I709V	exonic	ENSG00000143199	NA	nonsynonymous SNV	ENSG00000143199:ENST00000545172:exon14:c.A1666G:p.I556V,ENSG00000143199:ENST00000367848:exon17:c.A1849G:p.I617V,ENSG00000143199:ENST00000367851:exon17:c.A2125G:p.I709V	Score=300;Name=lod=22	NA	1q24.2	NA	NA	NA	NA	rs112466731	0.01	0.01	0.008	0.00539137	0.0199	0.001	0.0029	NA	0.0041	0.02	NA	0.01	NA	0.0104	0.022	1	T	0.0	B	0.002	B	0.290	N	1.000	N	-2.08	N	1.63	T	-0.917	T	0.004	T	0.022	-2.02	0.006	1.34	0.096	0.933	7.301	-2.020195	NA	1	0.014535	0.003177	NA	0.014	NA	8.2884984
823	15	40477831	40477831	G	A	exonic	BUB1B	NA	nonsynonymous SNV	BUB1B:NM_001211:exon8:c.G1046A:p.R349Q	exonic	ENSG00000156970	NA	nonsynonymous SNV	ENSG00000156970:ENST00000287598:exon8:c.G1046A:p.R349Q,ENSG00000156970:ENST00000412359:exon8:c.G1088A:p.R363Q	Score=529;Name=lod=189	NA	15q15.1	NA	NA	NA	NA	rs1801376	0.62	0.62	0.631	0.628195	0.6928	0.3462	0.6052	0.8593	0.5562	0.7	0.35	0.61	0.83	0.6566	0.83	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-2.175	N	2.74	T	-0.980	T	0.000	T	0.109	0.564	7.048	4.72	0.466	3.438	8.975	0.563973	NA	1	0.69593	0.814117	NA	0.71	NA	8.2880034
823	14	21469151	21469151	T	C	exonic	SLC39A2	NA	nonsynonymous SNV	SLC39A2:NM_014579:exon4:c.T343C:p.F115L	exonic	ENSG00000165794	NA	nonsynonymous SNV	ENSG00000165794:ENST00000298681:exon4:c.T343C:p.F115L	NA	NA	14q11.2	NA	NA	NA	NA	rs2234636	0.32	0.32	0.288	0.319888	0.333	0.373	0.487	0.1536	0.3579	0.33	0.38	0.45	0.13	0.361	0.45	1	T	0.0	B	0.001	B	0.803	N	0.999	P	-0.935	N	0.97	T	-0.968	T	0.000	T	0.074	-0.857	0.533	-10.9	-2.518	-1.414	15.491	-0.856861	NA	1	0.351628	0.18384	NA	0.319	NA	8.2877054
823	8	27729532	27729532	G	A	exonic	SCARA5	NA	synonymous SNV	SCARA5:NM_173833:exon9:c.C1407T:p.I469I	exonic	ENSG00000168079	NA	synonymous SNV	ENSG00000168079:ENST00000380385:exon8:c.C732T:p.I244I,ENSG00000168079:ENST00000354914:exon9:c.C1407T:p.I469I	Score=565;Name=lod=263	NA	8p21.1	Score=864;Name=V$YY1_01	Name=Pol2	NA	NA	rs61737291	0.14	0.14	0.134	0.152157	0.1243	0.245	0.0908	0.1074	0.1892	0.11	0.23	0.11	0.13	0.1327	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.080716	NA	NA	0.122442	0.113028	NA	0.217	NA	8.2872246
823	20	31889183	31889183	T	C	exonic	BPIFB1	NA	nonsynonymous SNV	BPIFB1:NM_033197:exon9:c.T892C:p.S298P	exonic	ENSG00000125999	NA	nonsynonymous SNV	ENSG00000125999:ENST00000253354:exon9:c.T892C:p.S298P	NA	NA	20q11.21	NA	NA	Name=28	NA	rs6120221	0.11	0.11	0.126	0.132987	0.004	NA	0.0418	0.4788	NA	0.01	NA	0.05	0.43	0.0396	0.43	1	T	0.0	B	0.0	B	0.013	N	1.000	P	-2.125	N	3.25	T	-0.971	T	0.000	T	0.058	-1.171	0.088	0.571	-0.141	0.368	3.555	-1.171219	NA	1	0.003256	0.400136	NA	0.116	NA	8.2864774
823	22	42423110	42423110	G	C	exonic	WBP2NL	NA	nonsynonymous SNV	WBP2NL:NM_152613:exon6:c.G855C:p.Q285H	exonic	ENSG00000183066	NA	nonsynonymous SNV	ENSG00000183066:ENST00000543212:exon4:c.G633C:p.Q211H,ENSG00000183066:ENST00000412113:exon5:c.G747C:p.Q249H,ENSG00000183066:ENST00000328823:exon6:c.G855C:p.Q285H,ENSG00000183066:ENST00000329620:exon6:c.G855C:p.Q285H,ENSG00000183066:ENST00000436265:exon6:c.G855C:p.Q285H	NA	NA	22q13.2	NA	NA	NA	NA	rs2301521	0.78	0.78	0.801	0.777756	0.671	0.8542	0.7046	0.9455	0.6339	0.67	0.84	0.71	0.93	0.7059	0.93	0.61	T	0.0	B	0.0	B	.	.	1.000	P	-0.55	N	2.22	T	-1.048	T	0.000	T	0.056	-1.653	0.012	-7.78	-4.641	-3.008	0.360	-1.653181	NA	0.36	0.670698	0.899682	NA	0.79	NA	8.2857354
824	2	203421199	203421199	G	A	exonic	BMPR2	NA	synonymous SNV	BMPR2:NM_001204:exon12:c.G2811A:p.R937R	exonic	ENSG00000204217	NA	synonymous SNV	ENSG00000204217:ENST00000374580:exon12:c.G2811A:p.R937R	Score=584;Name=lod=314	NA	2q33.2	Score=844;Name=V$GR_Q6	Name=GR	NA	NA	rs1061157	0.09	0.09	0.063	0.116414	0.1362	0.1042	0.1052	0.0045	0.2679	0.14	0.07	0.1	0.01	0.1203	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.369132	NA	NA	0.126163	0.024512	NA	0.065	NA	8.2840036
824	19	20807053	20807053	T	G	UTR3	ZNF626	NM_001076675:c.*43A>C	NA	NA	ncRNA_UTR3	ENSG00000188171	NA	NA	NA	Score=251;Name=lod=14	NA	19p12	NA	NA	NA	NA	rs112700497	0.07	0.07	0.053	0.0848642	0.0636	0.0625	0.0245	0.1104	0.138	0.07	0.06	0.03	0.1	0.078	0.1	0.01	D	.	.	.	.	.	.	.	.	.	.	.	.	-1.016	T	0.005	T	.	-0.327	2.447	0.898	0.243	2.772	5.561	-0.327184	NA	NA	0.074528	0.094795	NA	0.014	NA	8.283872
824	1	247836207	247836207	T	A	exonic	OR13G1	NA	nonsynonymous SNV	OR13G1:NM_001005487:exon1:c.A137T:p.K46I	exonic	ENSG00000197437	NA	nonsynonymous SNV	ENSG00000197437:ENST00000359688:exon1:c.A137T:p.K46I	NA	NA	1q44	NA	NA	NA	NA	rs28711149	0.31	0.31	0.306	0.329473	0.3519	0.376	0.2392	0.2965	0.3671	0.35	0.32	0.24	0.28	0.3383	0.36	1	T	0.0	B	0.0	B	0.019	N	1.000	P	-4.03	N	5.12	T	-0.968	T	0.000	T	0.094	-0.569	1.436	3.19	0.297	3.177	4.936	-0.568925	NA	1	0.360233	0.297776	NA	0.377	NA	8.2829004
824	10	71026510	71026510	C	A	exonic	HKDC1	NA	nonsynonymous SNV	HKDC1:NM_025130:exon18:c.C2751A:p.N917K	exonic	ENSG00000156510	NA	nonsynonymous SNV	ENSG00000156510:ENST00000354624:exon18:c.C2751A:p.N917K	NA	NA	10q22.1	NA	NA	NA	NA	rs906219	0.36	0.36	0.335	0.336262	0.3559	0.5942	0.4914	0.1104	0.2454	0.36	0.55	0.43	0.1	0.3412	0.55	0.02	D	0.0	B	0.0	B	0.572	N	1.000	P	0	N	-4.22	D	-0.987	T	0.000	T	0.088	2.17	13.21	0.702	0.029	0.590	4.536	2.169602	2.169602	0.03	0.353372	0.155924	NA	0.261	NA	8.2828614
824	1	247835674	247835674	G	A	exonic	OR13G1	NA	nonsynonymous SNV	OR13G1:NM_001005487:exon1:c.C670T:p.R224C	exonic	ENSG00000197437	NA	nonsynonymous SNV	ENSG00000197437:ENST00000359688:exon1:c.C670T:p.R224C	NA	NA	1q44	NA	NA	NA	NA	rs28446289	0.31	0.31	0.312	0.330871	0.3519	0.3839	0.2392	0.2958	0.3671	0.35	0.33	0.24	0.28	0.3384	0.36	0.01	D	0.112	B	0.052	B	0.054	N	1.000	P	2.865	M	8.38	T	-0.937	T	0.000	T	0.082	0.668	7.576	1.11	0.122	0.339	6.393	0.66778	NA	0.01	0.360233	0.297776	NA	0.377	NA	8.2828004
824	2	170062977	170062977	T	C	exonic	LRP2	NA	nonsynonymous SNV	LRP2:NM_004525:exon39:c.A7253G:p.E2418G	exonic	ENSG00000081479	NA	nonsynonymous SNV	ENSG00000081479:ENST00000263816:exon39:c.A7253G:p.E2418G	NA	NA	2q31.1	NA	NA	NA	NA	rs61995915	0.01	0.01	0.003	0.00539137	0.0209	NA	0.0014	NA	0.0051	0.02	NA	0.0028	NA	0.0129	0.02	0.54	T	0.001	B	0.001	B	0.608	N	1.000	N	0.035	N	-2.68	D	-0.815	T	0.224	T	0.05	-1.011	0.245	0.591	0.086	0.368	0.934	-1.010787	NA	0.39	0.016744	0.002951	NA	NA	NA	8.2827894
824	8	101608919	101608919	T	C	exonic	SNX31	NA	nonsynonymous SNV	SNX31:NM_152628:exon10:c.A926G:p.Q309R	exonic	ENSG00000174226	NA	nonsynonymous SNV	ENSG00000174226:ENST00000428383:exon7:c.A629G:p.Q210R,ENSG00000174226:ENST00000311812:exon10:c.A926G:p.Q309R	Score=278;Name=lod=18	NA	8q22.3	Score=894;Name=V$CP2_01	NA	NA	NA	rs2248609	0.36	0.36	0.341	0.383786	0.3539	0.1835	0.4611	0.5416	0.3528	0.35	0.19	0.45	0.53	0.3547	0.53	0.55	T	0.023	B	0.015	B	0.083	N	0.916	P	1.43	L	2.19	T	-0.918	T	0.000	T	0.039	-0.774	0.748	0.908	0.005	0.177	7.760	-0.773849	NA	0.55	0.342326	0.533591	NA	0.362	NA	8.2824074
824	3	97983561	97983561	G	C	exonic	OR5H6	NA	nonsynonymous SNV	OR5H6:NM_001005479:exon1:c.G433C:p.A145P	exonic	ENSG00000230301	NA	nonsynonymous SNV	ENSG00000230301:ENST00000383696:exon1:c.G433C:p.A145P	Score=446;Name=lod=87	NA	3q11.2	Score=823;Name=V$OCT1_01	NA	NA	NA	rs9289564	0.71	0.71	0.735	0.704673	0.6909	0.621	0.6254	0.8737	0.6329	0.69	0.68	0.59	0.88	0.681	0.88	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-3.54	N	8.7	T	-0.969	T	0.000	T	0.095	-1.122	0.124	1.25	-0.117	2.270	5.903	-1.12245	NA	1	0.680433	0.852928	NA	0.696	NA	8.2810004
824	1	228464248	228464248	T	G	exonic	OBSCN	NA	nonsynonymous SNV	OBSCN:NM_001098623:exon22:c.T6318G:p.D2106E,OBSCN:NM_052843:exon22:c.T6318G:p.D2106E,OBSCN:NM_001271223:exon26:c.T7443G:p.D2481E	exonic	ENSG00000154358	NA	nonsynonymous SNV	ENSG00000154358:ENST00000359599:exon11:c.T2859G:p.D953E,ENSG00000154358:ENST00000284548:exon22:c.T6318G:p.D2106E,ENSG00000154358:ENST00000422127:exon22:c.T6318G:p.D2106E,ENSG00000154358:ENST00000570156:exon26:c.T7443G:p.D2481E	Score=401;Name=lod=57	NA	1q42.13	Score=754;Name=V$HEN1_02	Name=E2F6_(H-50)	NA	NA	rs1188721	0.72	0.72	0.673	0.695487	0.664	0.75	0.7003	0.8495	0.4601	0.66	0.73	0.7	0.82	0.693	0.82	1	T	0.001	B	0.001	B	0.000	N	0.000	P	-1.4	N	3.66	T	-1.037	T	0.000	T	0.046	1.011	9.131	-0.623	-0.225	-0.293	7.276	1.011395	NA	1	0.696479	0.820785	ID=COSM1339607,COSM1339606,COSM1339608;OCCURENCE=1(large_intestine)	0.696	NA	8.2798544
824	4	79455733	79455733	C	T	exonic	FRAS1	NA	synonymous SNV	FRAS1:NM_025074:exon71:c.C11056T:p.L3686L	exonic	ENSG00000138759	NA	synonymous SNV	ENSG00000138759:ENST00000264895:exon71:c.C11056T:p.L3686L	NA	NA	4q21.21	NA	Name=ERalpha_a	NA	NA	rs4975139	0.52	0.52	0.526	0.514976	0.4632	0.7758	0.4395	0.3086	0.6319	0.47	0.79	0.45	0.35	0.4884	0.79	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.026	T	0.000	T	.	0.186	5.004	2.41	0.174	1.126	6.007	0.186442	NA	NA	0.435907	0.337852	NA	0.486	NA	8.2791596
824	15	50226313	50226313	G	T	exonic	ATP8B4	NA	nonsynonymous SNV	ATP8B4:NM_024837:exon15:c.C1354A:p.H452N	exonic	ENSG00000104043	NA	nonsynonymous SNV	ENSG00000104043:ENST00000284509:exon15:c.C1354A:p.H452N,ENSG00000104043:ENST00000557955:exon15:c.C1354A:p.H452N,ENSG00000104043:ENST00000559829:exon15:c.C1354A:p.H452N	NA	NA	15q21.2	NA	NA	NA	NA	rs2452524	0.66	0.66	0.691	0.639776	0.6918	0.4087	0.5951	0.8752	0.5378	0.71	0.41	0.63	0.87	0.6624	0.87	0.36	T	0.0	B	0.0	B	0.949	N	1.000	P	-1.195	N	0.03	T	-1.000	T	0.000	T	0.039	-0.331	2.43	-2.68	-1.130	1.045	6.673	-0.331053	NA	0.4	0.700233	0.82878	NA	0.739	NA	8.2789004
824	11	56086147	56086147	T	G	exonic	OR8K3	NA	nonsynonymous SNV	OR8K3:NM_001005202:exon1:c.T365G:p.L122R	exonic	ENSG00000181689	NA	nonsynonymous SNV	ENSG00000181689:ENST00000312711:exon1:c.T365G:p.L122R	Score=494;Name=lod=136	NA	11q12.1	Score=763;Name=V$PPARA_01	NA	NA	NA	rs960193	0.76	0.76	0.726	0.785543	0.675	0.8651	0.8156	0.7625	0.8272	0.66	0.85	0.82	0.77	0.7218	0.85	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-3.65	N	3.55	T	-1.013	T	0.000	T	0.046	-1.852	0.009	1.65	0.020	4.738	5.75	-1.852062	NA	1	0.657705	0.728305	NA	0.797	NA	8.2788284
824	2	74701836	74701836	G	A	exonic	CCDC142	NA	nonsynonymous SNV	CCDC142:NM_032779:exon9:c.C2069T:p.P690L	exonic	ENSG00000135637	NA	nonsynonymous SNV	ENSG00000135637:ENST00000290418:exon9:c.C2069T:p.P690L,ENSG00000135637:ENST00000393965:exon9:c.C2090T:p.P697L	NA	NA	2p13.1	Score=733;Name=V$MYOGNF1_01	NA	NA	NA	rs116238920	0.01	0.01	0.011	0.00778754	0.0258	NA	0.0173	NA	0.001	0.02	NA	0.01	NA	0.0126	0.02	0.74	T	0.017	B	0.025	B	0.503	N	1.000	N	1.79	L	0.88	T	-1.004	T	0.041	T	0.033	-1.324	0.033	0.923	0.310	0.270	3.873	-1.323679	NA	0.71	0.017093	0.002951	NA	NA	NA	8.2778404
824	15	79185898	79185898	C	A	exonic	MORF4L1	NA	synonymous SNV	MORF4L1:NM_001265603:exon7:c.C294A:p.A98A,MORF4L1:NM_001265604:exon9:c.C294A:p.A98A,MORF4L1:NM_001265605:exon9:c.C294A:p.A98A,MORF4L1:NM_006791:exon9:c.C558A:p.A186A,MORF4L1:NM_206839:exon10:c.C675A:p.A225A	exonic	ENSG00000185787	NA	synonymous SNV	ENSG00000185787:ENST00000558502:exon7:c.C294A:p.A98A,ENSG00000185787:ENST00000558746:exon8:c.C477A:p.A159A,ENSG00000185787:ENST00000558830:exon8:c.C294A:p.A98A,ENSG00000185787:ENST00000426013:exon9:c.C558A:p.A186A,ENSG00000185787:ENST00000559158:exon9:c.C294A:p.A98A,ENSG00000185787:ENST00000559345:exon9:c.C294A:p.A98A,ENSG00000185787:ENST00000559690:exon9:c.C294A:p.A98A,ENSG00000185787:ENST00000560422:exon9:c.C588A:p.A196A,ENSG00000185787:ENST00000331268:exon10:c.C675A:p.A225A,ENSG00000185787:ENST00000379535:exon10:c.C633A:p.A211A	Score=642;Name=lod=540	NA	15q25.1	Score=881;Name=V$NF1_Q6	NA	Name=6	NA	rs1435163	0.16	0.16	0.138	0.139976	0.1262	0.254	0.1326	0.1127	0.0787	0.13	0.26	0.12	0.11	0.1364	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.819425	NA	NA	0.12669	0.109112	NA	0.13	NA	8.2773766
824	9	116181419	116181419	A	G	exonic	C9orf43	NA	nonsynonymous SNV	C9orf43:NM_152786:exon4:c.A319G:p.I107V	exonic	ENSG00000157653	NA	nonsynonymous SNV	ENSG00000157653:ENST00000288462:exon4:c.A319G:p.I107V,ENSG00000157653:ENST00000374165:exon4:c.A319G:p.I107V	NA	NA	9q32	NA	NA	NA	NA	rs113088354	0.01	0.01	0.008	0.0113818	0.0169	0.003	0.0187	0.0008	0.0235	0.02	0.0017	0.03	NA	0.0182	0.03	0.99	T	0.11	B	0.028	B	0.071	N	1.000	N	0.345	N	0.86	T	-1.029	T	0.026	T	0.021	0.723	7.848	2.84	0.527	0.300	6.613	0.723287	NA	0.7	0.021163	0.004539	NA	0.007	NA	8.2770704
824	6	26027141	26027141	G	A	UTR3	HIST1H4B	NM_003544:c.*28C>T	NA	NA	UTR3	ENSG00000124529	ENST00000377364:c.*28C>T	NA	NA	Score=507;Name=lod=153	NA	6p22.2	NA	Name=HEY1,PAX5-N19,PAX5-C20,Pol2,Pol2(phosphoS2),Sin3Ak-20,Pol2-4H8,Pol2(b),ELK4,USF2	Name=14	Score=269;Name=2016917_0_+_269	rs114259939	0.01	0.01	0.007	0.00898562	0.0258	NA	0.0115	0.0008	0.0102	0.03	NA	0.01	NA	0.014	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.045902	2.045902	NA	0.017791	0.003631	NA	0.014	NA	8.2757424
824	8	144942413	144942413	T	C	exonic	EPPK1	NA	nonsynonymous SNV	EPPK1:NM_031308:exon1:c.A5009G:p.D1670G	exonic	ENSG00000227184	NA	nonsynonymous SNV	ENSG00000227184:ENST00000525985:exon2:c.A5009G:p.D1670G	Score=509;Name=lod=156	NA	8q24.3	NA	NA	NA	NA	rs201641573	NA	NA	0.002	0.00638978	0.0219	0.002	0.0086	NA	0.002	NA	NA	NA	NA	0.0163	0.02	1	T	0.0	B	0.0	B	.	.	0.872	N	0.71	N	0.11	T	-1.020	T	0.049	T	0.099	-0.112	3.451	1.27	0.380	0.076	8.920	-0.111943	NA	NA	0.019918	0.005018	ID=COSM1330245;OCCURENCE=1(ovary),1(breast)	0.007	NA	8.2752154
825	2	86371883	86371883	T	C	exonic	IMMT	NA	synonymous SNV	IMMT:NM_001100169:exon15:c.A1782G:p.A594A,IMMT:NM_001100170:exon15:c.A1752G:p.A584A,IMMT:NM_006839:exon15:c.A1785G:p.A595A	exonic	ENSG00000132305	NA	synonymous SNV	ENSG00000132305:ENST00000409051:exon14:c.A1644G:p.A548A,ENSG00000132305:ENST00000254636:exon15:c.A1488G:p.A496A,ENSG00000132305:ENST00000410111:exon15:c.A1785G:p.A595A,ENSG00000132305:ENST00000442664:exon15:c.A1782G:p.A594A,ENSG00000132305:ENST00000449247:exon15:c.A1752G:p.A584A	NA	NA	2p11.2	Score=875;Name=V$CHOP_01	NA	NA	NA	rs8244	0.28	0.28	0.246	0.260783	0.4761	0.1488	0.3703	0.0582	0.3507	0.46	0.16	0.4	0.07	0.4162	0.5	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.035	T	0.000	T	.	-0.955	0.334	-10.5	-3.336	-5.190	5.262	-0.954617	NA	NA	0.503146	0.11261	NA	0.333	NA	8.2712206
825	11	828916	828916	G	A	exonic	EFCAB4A	NA	nonsynonymous SNV	EFCAB4A:NM_173584:exon3:c.G230A:p.R77Q	exonic	ENSG00000177685	NA	nonsynonymous SNV	ENSG00000177685:ENST00000525077:exon2:c.G230A:p.R77Q,ENSG00000177685:ENST00000450448:exon3:c.G230A:p.R77Q,ENSG00000177685:ENST00000527089:exon3:c.G230A:p.R77Q,ENSG00000177685:ENST00000528542:exon3:c.G230A:p.R77Q,ENSG00000177685:ENST00000533803:exon3:c.G230A:p.R77Q	Score=483;Name=lod=123	NA	11p15.5	NA	NA	NA	NA	rs7126805	0.67	0.67	0.627	0.568291	0.6948	0.6647	0.7695	0.4576	0.3456	0.7	0.72	0.76	0.49	0.6597	0.76	0.8	T	0.011	B	0.002	B	0.001	N	0.999	P	-1.525	N	0.98	T	-0.977	T	0.000	T	0.053	1.446	10.78	2.2	0.597	1.510	7.287	1.446198	1.446198	1	0.708671	0.515988	NA	0.659	NA	8.2701624
825	10	61665886	61665886	C	A	exonic	CCDC6	NA	synonymous SNV	CCDC6:NM_005436:exon1:c.G297T:p.V99V	exonic	ENSG00000108091	NA	synonymous SNV	ENSG00000108091:ENST00000263102:exon1:c.G297T:p.V99V	Score=736;Name=lod=1311	NA	10q21.2	Score=820;Name=V$ER_Q6	Name=PAX5-N19	Name=10	NA	rs1171830	0.4	0.4	0.327	0.375399	0.4523	0.627	0.4726	0.0393	0.4223	0.46	0.6	0.45	0.04	0.4731	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.557994	1.557994	NA	0.471395	0.113709	NA	0.333	NA	8.2698716
825	10	106039185	106039185	A	G	exonic	GSTO2	NA	nonsynonymous SNV	GSTO2:NM_001191014:exon3:c.A340G:p.N114D,GSTO2:NM_183239:exon5:c.A424G:p.N142D	exonic	ENSG00000065621	NA	nonsynonymous SNV	ENSG00000065621:ENST00000369707:exon3:c.A340G:p.N114D,ENSG00000065621:ENST00000401888:exon4:c.A424G:p.N142D,ENSG00000065621:ENST00000338595:exon5:c.A424G:p.N142D	NA	NA	10q25.1	Score=820;Name=V$IRF7_01	NA	NA	NA	rs156697	0.43	0.43	0.479	0.440695	0.3668	0.255	0.2752	0.8048	0.3333	0.36	0.27	0.31	0.81	0.3562	0.81	0.63	T	0.0	B	0.001	B	0.004	N	1.000	P	-1.04	N	3.17	T	-1.040	T	0.000	T	0.044	-0.871	0.5	3.96	0.851	0.748	7.357	-0.871174	NA	0.68	0.340581	0.742851	ID=COSM147038;OCCURENCE=1(stomach)	0.413	NA	8.2697524
825	21	43557698	43557698	A	C	exonic	UMODL1	NA	nonsynonymous SNV	UMODL1:NM_001199527:exon21:c.A4093C:p.N1365H,UMODL1:NM_173568:exon21:c.A4309C:p.N1437H,UMODL1:NM_001004416:exon22:c.A3925C:p.N1309H,UMODL1:NM_001199528:exon22:c.A3709C:p.N1237H	exonic	ENSG00000177398	NA	nonsynonymous SNV	ENSG00000177398:ENST00000400427:exon21:c.A4093C:p.N1365H,ENSG00000177398:ENST00000408989:exon21:c.A4309C:p.N1437H,ENSG00000177398:ENST00000400424:exon22:c.A3709C:p.N1237H,ENSG00000177398:ENST00000408910:exon22:c.A3925C:p.N1309H	NA	NA	21q22.3	NA	NA	NA	NA	rs3819142	0.18	0.18	0.156	0.220647	0.1769	0.256	0.245	0.1452	0.3139	0.17	0.23	0.21	0.12	0.2085	0.28	.	.	0.802	P	0.126	B	0.253	N	1.000	P	0	N	-0.64	T	-1.079	T	0.000	T	0.05	1.088	9.441	1.19	0.336	2.218	7.542	1.088116	NA	0.1	0.179833	0.156556	NA	0.203	NA	8.2681004
825	6	116575083	116575083	C	A	exonic	TSPYL4	NA	nonsynonymous SNV	TSPYL4:NM_021648:exon1:c.G89T:p.R30L	exonic	ENSG00000187189	NA	nonsynonymous SNV	ENSG00000187189:ENST00000420283:exon1:c.G89T:p.R30L	NA	NA	6q22.1	NA	Name=Oct-2,ELF1_(SC-631),ZEB1_(SC-25388),Sin3Ak-20,Pol2-4H8,Pol2,Pol2(phosphoS2),POU2F2	NA	NA	rs2232470	0.84	0.84	0.838	0.883187	0.661	0.998	0.7896	0.9629	0.9519	0.67	1	0.75	0.96	0.7653	1	0.82	T	0.0	B	0.0	B	.	.	1.000	P	-0.41	N	1.81	T	-0.961	T	0.005	T	0.018	0.487	6.64	-4.12	-1.168	-0.926	2.291	0.486619	NA	1	0.641453	0.912563	NA	0.768	NA	8.2655804
825	11	58206703	58206703	C	T	exonic	OR5B12	NA	nonsynonymous SNV	OR5B12:NM_001004733:exon1:c.G922A:p.A308T	exonic	ENSG00000172362	NA	nonsynonymous SNV	ENSG00000172362:ENST00000302572:exon1:c.G922A:p.A308T	NA	NA	11q12.1	NA	NA	NA	NA	rs118148210	0.01	0.01	0.007	0.00858626	0.0229	0.001	0.0029	NA	0.0174	0.03	NA	NA	NA	0.0209	0.03	0.39	T	0.009	B	0.01	B	0.504	N	1.000	N	0	N	7.26	T	-1.037	T	0.000	T	0.009	-2	0.007	-1.76	-0.415	-1.090	4.995	-2.000084	NA	0.39	0.024214	0.005679	NA	NA	NA	8.2653194
825	22	50502544	50502544	G	A	exonic	MLC1	NA	synonymous SNV	MLC1:NM_015166:exon11:c.C978T:p.C326C,MLC1:NM_139202:exon11:c.C978T:p.C326C	exonic	ENSG00000100427	NA	synonymous SNV	ENSG00000100427:ENST00000450140:exon9:c.C822T:p.C274C,ENSG00000100427:ENST00000431262:exon10:c.C888T:p.C296C,ENSG00000100427:ENST00000535444:exon10:c.C741T:p.C247C,ENSG00000100427:ENST00000538737:exon10:c.C876T:p.C292C,ENSG00000100427:ENST00000311597:exon11:c.C978T:p.C326C,ENSG00000100427:ENST00000395876:exon11:c.C978T:p.C326C	Score=389;Name=lod=51	NA	22q13.33	Score=849;Name=V$HMX1_01	NA	NA	NA	rs11568186	0.11	0.11	0.087	0.13119	0.1312	0.0923	0.1758	0.059	0.2372	0.12	0.1	0.16	0.08	0.1311	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.538103	NA	NA	0.139302	0.074444	NA	0.043	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117628.2;CLNDSDB=.;CLNDSDBID=.	8.2650646
826	9	94486321	94486321	C	T	exonic	ROR2	NA	nonsynonymous SNV	ROR2:NM_004560:exon9:c.G2455A:p.V819I	exonic	ENSG00000169071	NA	nonsynonymous SNV	ENSG00000169071:ENST00000375708:exon9:c.G2455A:p.V819I	Score=429;Name=lod=74	NA	9q22.31	NA	NA	NA	NA	rs10761129	0.78	0.78	0.794	0.748003	0.6879	0.9137	0.7723	0.7776	0.5818	0.7	0.93	0.74	0.78	0.7103	0.93	1	T	0.0	B	0.0	B	0.001	N	0.000	P	-1.04	N	-0.94	T	-0.939	T	0.000	T	0.039	-1.385	0.024	3.39	0.273	4.807	8.965	-1.385455	NA	1	0.670195	0.760327	NA	0.746	NA	8.2649384
826	1	38338795	38338795	A	G	exonic	INPP5B	NA	nonsynonymous SNV	INPP5B:NM_005540:exon19:c.T1994C:p.M665T	exonic	ENSG00000204084	NA	nonsynonymous SNV	ENSG00000204084:ENST00000373027:exon13:c.T1502C:p.M501T,ENSG00000204084:ENST00000373026:exon18:c.T2234C:p.M745T,ENSG00000204084:ENST00000373023:exon19:c.T2234C:p.M745T,ENSG00000204084:ENST00000373024:exon19:c.T1994C:p.M665T	NA	NA	1p34.3	NA	NA	NA	NA	rs11488569	0.57	0.57	0.532	0.523562	0.7266	0.4752	0.5994	0.298	0.6155	0.74	0.51	0.59	0.34	0.6401	0.74	0.65	T	0.0	B	0.0	B	0.944	N	1.000	P	-1.645	N	-2.92	D	-0.950	T	0.000	T	0.033	-1.564	0.015	2.59	0.026	1.586	5.429	-1.564422	NA	0.29	0.703686	0.378459	NA	0.551	NA	8.2629474
826	18	22775185	22775185	C	T	exonic	ZNF521	NA	synonymous SNV	ZNF521:NM_015461:exon5:c.G3597A:p.K1199K	exonic	ENSG00000198795	NA	nonsynonymous SNV	ENSG00000198795:ENST00000399425:exon6:c.G3677A:p.S1226N	Score=683;Name=lod=792	NA	18q11.2	Score=1000;Name=V$NKX25_01	NA	NA	Score=105;Name=1065488_0_-_105	rs1140026	0.21	0.21	0.185	0.226637	0.2535	0.2768	0.2089	0.1316	0.2883	0.25	0.23	0.2	0.15	0.2427	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.196755	NA	NA	0.242326	0.143279	NA	0.217	NA	8.261474
826	3	42787469	42787469	A	G	exonic	CCDC13	NA	synonymous SNV	CCDC13:NM_144719:exon7:c.T771C:p.S257S	exonic	ENSG00000244607	NA	synonymous SNV	ENSG00000244607:ENST00000310232:exon7:c.T771C:p.S257S	Score=369;Name=lod=42	NA	3p22.1	Score=797;Name=V$OLF1_01	Name=JunD,FOSL2	Name=4	NA	rs2240859	0.48	0.48	0.474	0.501398	0.4592	0.4534	0.402	0.5439	0.6074	0.46	0.47	0.46	0.54	0.4876	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.042159	NA	NA	0.458488	0.544031	NA	0.493	NA	8.2613786
826	19	48537585	48537585	A	G	exonic	CABP5	NA	nonsynonymous SNV	CABP5:NM_019855:exon5:c.T383C:p.V128A	exonic	ENSG00000105507	NA	nonsynonymous SNV	ENSG00000105507:ENST00000293255:exon5:c.T383C:p.V128A	NA	NA	19q13.33	NA	NA	NA	NA	rs3745746	0.23	0.23	0.234	0.222244	0.3569	0.0645	0.281	0.1399	0.316	0.35	0.09	0.33	0.14	0.3284	0.39	1	T	0.0	B	0.001	B	0.045	N	1.000	P	-1.685	N	-0.35	T	-1.038	T	0.000	T	0.061	-1.403	0.023	-5.16	-0.593	-2.822	8.839	-1.402989	NA	1	0.387558	0.171584	NA	0.268	NA	8.2604754
826	14	23899027	23899027	C	T	exonic	MYH7	NA	synonymous SNV	MYH7:NM_000257:exon12:c.G1095A:p.K365K	exonic	ENSG00000092054	NA	synonymous SNV	ENSG00000092054:ENST00000355349:exon12:c.G1095A:p.K365K	Score=592;Name=lod=340	NA	14q11.2	NA	NA	NA	Score=121;Name=686577_0_+_121	rs735711	0.09	0.09	0.089	0.0796725	0.1402	0.001	0.0706	0.1362	0.0286	0.13	0.0017	0.09	0.14	0.1159	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.385462	1.385462	NA	0.151279	0.144122	NA	0.203	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=mult|single;CLNACC=RCV000035697.2|RCV000127021.1;CLNDSDB=.|.;CLNDSDBID=.|.	8.2592876
826	10	124742895	124742895	G	C	exonic	PSTK	NA	nonsynonymous SNV	PSTK:NM_153336:exon3:c.G616C:p.G206R	exonic	ENSG00000179988	NA	nonsynonymous SNV	ENSG00000179988:ENST00000368887:exon3:c.G616C:p.G206R,ENSG00000179988:ENST00000405485:exon3:c.G616C:p.G206R	Score=309;Name=lod=24	NA	10q26.13	NA	NA	NA	NA	rs3736582	0.59	0.59	0.602	0.581669	0.7296	0.3919	0.5576	0.6589	0.5378	0.73	0.38	0.59	0.63	0.6339	0.73	0.47	T	0.003	B	0.009	B	0.175	N	0.486	P	1.935	M	1.59	T	-0.991	T	0.000	T	0.682	1.164	9.739	1.81	0.339	1.664	4.515	1.164358	NA	0.12	0.710698	0.64503	ID=COSM147077;OCCURENCE=1(stomach)	0.601	NA	8.2591354
826	8	87076520	87076520	C	A	exonic	PSKH2	NA	nonsynonymous SNV	PSKH2:NM_033126:exon2:c.G526T:p.A176S	exonic	ENSG00000147613	NA	nonsynonymous SNV	ENSG00000147613:ENST00000276616:exon2:c.G526T:p.A176S	NA	NA	8q21.3	NA	NA	Name=4	NA	rs6998760	0.33	0.33	0.302	0.295727	0.3698	0.4415	0.2911	0.0885	0.3528	0.37	0.47	0.31	0.1	0.3447	0.47	1	T	0.0	B	0.002	B	.	.	1.000	P	-0.725	N	1.31	T	-0.934	T	0.000	T	0.032	-2.272	0.004	-3.35	-0.517	0.430	12.419	-2.272117	NA	0.78	0.360581	0.118248	ID=COSM150503;OCCURENCE=1(stomach)	0.312	NA	8.2582524
826	2	185801103	185801103	A	C	exonic	ZNF804A	NA	nonsynonymous SNV	ZNF804A:NM_194250:exon4:c.A980C:p.N327T	exonic	ENSG00000170396	NA	nonsynonymous SNV	ENSG00000170396:ENST00000302277:exon4:c.A980C:p.N327T	NA	NA	2q32.1	NA	NA	NA	NA	rs61739291	0.01	0.01	0.005	0.00938498	0.0288	NA	0.0058	NA	0.0143	0.03	NA	0.01	NA	0.0196	0.03	0.37	T	0.144	B	0.022	B	0.017	N	1.000	N	1.5	L	0.84	T	-1.061	T	0.031	T	0.016	0.764	8.043	3.09	0.356	0.214	3.017	0.764214	NA	0.36	0.027112	0.006809	NA	NA	NA	8.2578214
826	19	10404519	10404519	G	A	exonic	ICAM5	NA	synonymous SNV	ICAM5:NM_003259:exon7:c.G1611A:p.E537E	exonic	ENSG00000105376	NA	synonymous SNV	ENSG00000105376:ENST00000221980:exon7:c.G1611A:p.E537E	Score=243;Name=lod=13	NA	19p13.2	Score=938;Name=V$TCF11_01	Name=CCNT2	NA	NA	rs17852402	0.09	0.09	0.074	0.0948482	0.1292	0.0476	0.1398	0.0227	0.1738	0.13	0.06	0.17	0.01	0.1338	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.388901	NA	NA	0.146744	0.040626	NA	0.109	NA	8.2569226
826	11	1155156	1155156	G	A	intergenic	MUC2,MUC5B	dist=50739;dist=89139	NA	NA	exonic	ENSG00000215182	NA	nonsynonymous SNV	ENSG00000215182:ENST00000356191:exon3:c.G164A:p.R55H,ENSG00000215182:ENST00000534821:exon3:c.G164A:p.R55H	NA	NA	11p15.5	NA	NA	NA	NA	rs76577728	0.01	0.01	0.006	0.00758786	0.0268	NA	0.0115	0.0015	0.001	0.03	NA	0.01	0.01	0.0172	0.033	0.12	T	0.487	P	0.054	B	.	.	.	.	1.545	L	2.14	T	-1.078	T	0.011	T	0.238	1.54	11.1	-4.75	-1.161	-0.816	3.588	1.54046	1.54046	0.08	0.033417	0.006286	NA	0.007	NA	8.2559164
826	21	37442632	37442632	G	C	exonic	CBR1	NA	synonymous SNV	CBR1:NM_001757:exon1:c.G219C:p.L73L	exonic	ENSG00000159228	NA	synonymous SNV	ENSG00000159228:ENST00000290349:exon1:c.G219C:p.L73L,ENSG00000159228:ENST00000399191:exon1:c.G219C:p.L73L,ENSG00000159228:ENST00000439427:exon1:c.G219C:p.L73L,ENSG00000159228:ENST00000530908:exon1:c.G219C:p.L73L	Score=496;Name=lod=138	NA	21q22.12	NA	Name=E2F6,E2F6_(H-50),HA-E2F1	Name=19	NA	rs25678	0.15	0.15	0.136	0.160543	0.1113	0.2093	0.2046	0.0703	0.2515	0.12	0.25	0.19	0.06	0.1616	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.51926	3.51926	NA	0.138221	0.087284	NA	0.101	NA	8.2555456
826	19	9059181	9059181	G	A	exonic	MUC16	NA	nonsynonymous SNV	MUC16:NM_024690:exon3:c.C28265T:p.P9422L	exonic	ENSG00000181143	NA	nonsynonymous SNV	ENSG00000181143:ENST00000397910:exon3:c.C28265T:p.P9422L	NA	NA	19p13.2	NA	NA	NA	NA	rs12459532	0.02	0.02	0.013	0.0363419	0.0189	0.0099	0.1153	0.0008	0.0736	0.02	0.01	0.1	NA	0.0382	0.1	0	D	0.183	B	0.122	B	.	.	.	.	0.55	N	2.03	T	-1.023	T	0.001	T	0.057	0.057	4.312	0.802	0.328	-0.068	5.188	0.057126	NA	0	0.021157	0.005685	NA	0.022	NA	8.2550764
827	4	83765605	83765605	C	A	exonic	SEC31A	NA	nonsynonymous SNV	SEC31A:NM_016211:exon19:c.G2443T:p.A815S,SEC31A:NM_001191049:exon20:c.G2545T:p.A849S,SEC31A:NM_001077206:exon21:c.G2560T:p.A854S,SEC31A:NM_001077207:exon21:c.G2560T:p.A854S,SEC31A:NM_001077208:exon21:c.G2560T:p.A854S,SEC31A:NM_014933:exon21:c.G2560T:p.A854S	exonic	ENSG00000138674	NA	nonsynonymous SNV	ENSG00000138674:ENST00000264405:exon14:c.G1852T:p.A618S,ENSG00000138674:ENST00000500777:exon18:c.G2443T:p.A815S,ENSG00000138674:ENST00000326950:exon19:c.G2443T:p.A815S,ENSG00000138674:ENST00000348405:exon19:c.G2443T:p.A815S,ENSG00000138674:ENST00000505984:exon19:c.G2443T:p.A815S,ENSG00000138674:ENST00000513858:exon19:c.G2443T:p.A815S,ENSG00000138674:ENST00000443462:exon20:c.G2545T:p.A849S,ENSG00000138674:ENST00000311785:exon21:c.G2560T:p.A854S,ENSG00000138674:ENST00000395310:exon21:c.G2560T:p.A854S,ENSG00000138674:ENST00000432794:exon21:c.G2560T:p.A854S,ENSG00000138674:ENST00000448323:exon21:c.G2560T:p.A854S,ENSG00000138674:ENST00000505472:exon21:c.G2653T:p.A885S,ENSG00000138674:ENST00000508479:exon21:c.G2560T:p.A854S,ENSG00000138674:ENST00000508502:exon21:c.G2560T:p.A854S,ENSG00000138674:ENST00000509142:exon21:c.G2560T:p.A854S,ENSG00000138674:ENST00000355196:exon23:c.G2560T:p.A854S	NA	NA	4q21.22	NA	NA	NA	NA	rs11541628	0.01	0.01	0.019	0.00998403	0.0338	NA	0.0187	NA	0.0031	0.03	NA	0.02	NA	0.0198	0.03	0.49	T	0.386	B	0.157	B	0.342	N	1.000	N	0.695	N	3.14	T	-1.063	T	0.029	T	0.194	0.528	6.862	3.78	0.682	0.912	8.939	0.528466	NA	0.35	0.026512	0.004766	NA	NA	NA	8.2532214
827	4	57221348	57221348	T	C	exonic	AASDH	NA	nonsynonymous SNV	AASDH:NM_181806:exon6:c.A1103G:p.K368R	exonic	ENSG00000157426	NA	nonsynonymous SNV	ENSG00000157426:ENST00000513376:exon5:c.A803G:p.K268R,ENSG00000157426:ENST00000602986:exon5:c.A644G:p.K215R,ENSG00000157426:ENST00000205214:exon6:c.A1103G:p.K368R,ENSG00000157426:ENST00000451613:exon6:c.A1103G:p.K368R,ENSG00000157426:ENST00000502617:exon6:c.A1103G:p.K368R	NA	NA	4q12	NA	NA	NA	NA	rs3796543	0.07	0.07	0.068	0.0646965	0.0179	0.1915	0.0216	0.0129	0.0828	0.02	0.21	0.04	0.02	0.0424	0.21	.	.	0.004	B	0.006	B	0.261	N	0.000	P	-0.745	N	0.97	T	-0.986	T	0.000	T	0.051	-0.312	2.516	1.78	0.378	1.158	7.146	-0.311933	NA	0.62	0.020698	0.013164	NA	0.058	NA	8.2523354
827	16	88779739	88779739	A	G	exonic	CTU2	NA	nonsynonymous SNV	CTU2:NM_001012759:exon8:c.A757G:p.M253V,CTU2:NM_001012762:exon8:c.A757G:p.M253V	exonic	ENSG00000174177	NA	nonsynonymous SNV	ENSG00000174177:ENST00000378384:exon7:c.A496G:p.M166V,ENSG00000174177:ENST00000312060:exon8:c.A757G:p.M253V,ENSG00000174177:ENST00000453996:exon8:c.A757G:p.M253V,ENSG00000174177:ENST00000567949:exon8:c.A970G:p.M324V	Score=462;Name=lod=101	NA	16q24.3	NA	Name=ZBTB7A_(SC-34508)	NA	NA	rs11549837	0.45	0.45	0.422	0.452676	0.3439	0.6637	0.4308	0.4372	0.3834	0.37	0.66	0.4	0.38	0.3996	0.66	0.71	T	0.0	B	0.0	B	0.119	N	0.999	P	-2.135	N	2.48	T	-1.008	T	0.000	T	0.032	-1.128	0.119	1.54	0.492	0.845	4.674	-1.128461	NA	1	0.340475	0.416781	NA	0.341	NA	8.2493584
827	5	7897283	7897283	G	A	exonic	MTRR	NA	synonymous SNV	MTRR:NM_002454:exon14:c.G1875A:p.V625V,MTRR:NM_024010:exon14:c.G1956A:p.V652V	exonic	ENSG00000124275	NA	synonymous SNV	ENSG00000124275:ENST00000264668:exon14:c.G1956A:p.V652V,ENSG00000124275:ENST00000440940:exon14:c.G1875A:p.V625V	Score=429;Name=lod=74	NA	5p15.31	NA	Name=CTCF,CTCF_(C-20),Rad21,FOSL1_(SC-183),eGFP-JunD,c-Fos,YY1_(C-20),YY1,SMC3_(ab9263),Egr-1,CTCF_(SC-5916),CTCFL_(SC-98982),eGFP-JunB	Name=96	NA	rs12347	0.22	0.22	0.194	0.24381	0.1322	0.1399	0.3415	0.4312	0.1431	0.12	0.15	0.29	0.38	0.1678	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.936013	NA	NA	0.117326	0.370404	NA	0.326	NA	8.2493406
827	19	22375868	22375868	C	T	exonic	ZNF676	NA	nonsynonymous SNV	ZNF676:NM_001001411:exon2:c.G80A:p.G27E	exonic	ENSG00000196109	NA	nonsynonymous SNV	ENSG00000196109:ENST00000397121:exon2:c.G80A:p.G27E	NA	NA	19p12	NA	NA	NA	NA	rs8104929	0.4	0.4	0.381	0.441294	0.3459	0.3393	0.3689	0.6331	0.4366	0.34	0.32	0.35	0.63	0.3871	0.63	0.35	T	0.999	D	0.972	D	.	.	0.998	P	1.405	L	5.57	T	-1.062	T	0.000	T	0.11	0.538	6.915	0.784	0.181	0.737	4.744	0.538495	NA	0.34	0.351052	0.567505	NA	0.399	NA	8.2492814
827	10	124329710	124329710	C	A	exonic	DMBT1	NA	nonsynonymous SNV	DMBT1:NM_004406:exon3:c.C124A:p.P42T,DMBT1:NM_007329:exon3:c.C124A:p.P42T,DMBT1:NM_017579:exon3:c.C124A:p.P42T	exonic	ENSG00000187908	NA	nonsynonymous SNV	ENSG00000187908:ENST00000330163:exon3:c.C124A:p.P42T,ENSG00000187908:ENST00000338354:exon3:c.C124A:p.P42T,ENSG00000187908:ENST00000344338:exon3:c.C124A:p.P42T,ENSG00000187908:ENST00000359586:exon3:c.C124A:p.P42T,ENSG00000187908:ENST00000368909:exon3:c.C124A:p.P42T,ENSG00000187908:ENST00000368955:exon3:c.C124A:p.P42T,ENSG00000187908:ENST00000368956:exon3:c.C124A:p.P42T	NA	NA	10q26.13	NA	NA	NA	NA	rs11523871	0.7	0.7	0.687	0.705671	0.6789	0.7758	0.7882	0.612	0.729	0.69	0.77	0.78	0.58	0.7161	0.78	0.61	T	0.025	B	0.025	B	.	.	1.000	P	-0.345	N	1.97	T	-0.973	T	0.000	T	0.028	-1.601	0.014	-3.03	-5.226	-2.429	1.383	-1.600744	NA	0.63	0.689294	0.641525	NA	0.732	NA	8.2490394
827	10	124330427	124330427	C	T	exonic	DMBT1	NA	nonsynonymous SNV	DMBT1:NM_004406:exon4:c.C161T:p.S54L,DMBT1:NM_007329:exon4:c.C161T:p.S54L,DMBT1:NM_017579:exon4:c.C161T:p.S54L	exonic	ENSG00000187908	NA	nonsynonymous SNV	ENSG00000187908:ENST00000330163:exon4:c.C161T:p.S54L,ENSG00000187908:ENST00000338354:exon4:c.C161T:p.S54L,ENSG00000187908:ENST00000344338:exon4:c.C161T:p.S54L,ENSG00000187908:ENST00000359586:exon4:c.C161T:p.S54L,ENSG00000187908:ENST00000368909:exon4:c.C161T:p.S54L,ENSG00000187908:ENST00000368955:exon4:c.C161T:p.S54L,ENSG00000187908:ENST00000368956:exon4:c.C161T:p.S54L	NA	NA	10q26.13	NA	NA	NA	NA	rs3013236	0.7	0.7	0.689	0.705272	0.6789	0.7738	0.7882	0.612	0.729	0.69	0.77	0.78	0.58	0.716	0.78	0.66	T	0.148	B	0.032	B	.	.	1.000	P	0.55	N	1.96	T	-0.983	T	0.000	T	0.046	1.079	9.406	-3.13	-3.087	-2.160	3.228	1.079226	NA	0.16	0.689626	0.642216	NA	0.732	NA	8.2488074
827	11	7324584	7324584	G	A	exonic	SYT9	NA	nonsynonymous SNV	SYT9:NM_175733:exon2:c.G460A:p.V154M	exonic	ENSG00000170743	NA	nonsynonymous SNV	ENSG00000170743:ENST00000318881:exon2:c.G460A:p.V154M,ENSG00000170743:ENST00000396716:exon2:c.G364A:p.V122M,ENSG00000170743:ENST00000524820:exon2:c.G364A:p.V122M,ENSG00000170743:ENST00000532592:exon2:c.G460A:p.V154M	NA	NA	11p15.4	NA	NA	NA	NA	rs78477754	0.02	0.02	0.014	0.0139776	0.0288	NA	0.0288	0.0151	0.001	0.03	NA	0.04	0.01	0.0237	0.04	0.23	T	0.006	B	0.007	B	0.006	N	1.000	N	-0.405	N	0.53	T	-1.066	T	0.016	T	0.222	0.049	4.269	1.29	0.368	2.068	8.314	0.049097	NA	0.28	0.032123	0.017038	NA	0.014	NA	8.2487104
827	11	69462910	69462910	G	A	exonic	CCND1	NA	synonymous SNV	CCND1:NM_053056:exon4:c.G723A:p.P241P	exonic	ENSG00000110092	NA	synonymous SNV	ENSG00000110092:ENST00000227507:exon4:c.G723A:p.P241P	Score=535;Name=lod=199	NA	11q13.3	Score=816;Name=V$PAX2_01	Name=PAX5-C20,Pol2	NA	NA	rs9344	0.42	0.42	0.413	0.413538	0.497	0.5714	0.3487	0.1876	0.5164	0.49	0.56	0.38	0.19	0.4551	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.055813	2.055813	NA	0.465999	0.232045	ID=COSM1179751;OCCURENCE=1(prostate)	0.312	CLINSIG=other|other|other;CLNDBN=Colorectal_cancer\x2c_susceptibility_to|Multiple_myeloma\x2c_translocation_11\x2c14_type|VON_HIPPEL-LINDAU_SYNDROME\x2c_MODIFIER_OF;CLNREVSTAT=single|single|single;CLNACC=RCV000014762.3|RCV000083293.3|RCV000087019.3;CLNDSDB=.|MedGen|.;CLNDSDBID=.|CN186214|.	8.2485676
827	17	79478019	79478019	G	A	exonic	ACTG1	NA	synonymous SNV	ACTG1:NM_001199954:exon5:c.C918T:p.Y306Y,ACTG1:NM_001614:exon5:c.C918T:p.Y306Y	exonic	ENSG00000184009	NA	synonymous SNV	ENSG00000184009:ENST00000575842:exon4:c.C918T:p.Y306Y,ENSG00000184009:ENST00000331925:exon5:c.C918T:p.Y306Y,ENSG00000184009:ENST00000573283:exon5:c.C918T:p.Y306Y,ENSG00000184009:ENST00000575087:exon5:c.C918T:p.Y306Y,ENSG00000184009:ENST00000576544:exon5:c.C918T:p.Y306Y	Score=518;Name=lod=170	NA	17q25.3	Score=883;Name=V$YY1_01	Name=HEY1,Pol2(b),Pol2-4H8,CTCF_(SC-5916),Pol2,NRSF	Name=121	NA	rs1139405	0.77	0.77	0.761	0.75619	0.8151	0.8433	0.7666	0.6097	0.7965	0.82	0.85	0.79	0.61	0.7902	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.623131	NA	NA	0.816163	0.634362	ID=COSM1387303;OCCURENCE=1(large_intestine)	0.754	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000037126.3;CLNDSDB=.;CLNDSDBID=.	8.2452036
828	6	143382110	143382110	T	C	exonic	AIG1	NA	synonymous SNV	AIG1:NM_016108:exon1:c.T48C:p.S16S	exonic	ENSG00000146416	NA	synonymous SNV	ENSG00000146416:ENST00000275235:exon1:c.T48C:p.S16S,ENSG00000146416:ENST00000344492:exon1:c.T48C:p.S16S,ENSG00000146416:ENST00000357847:exon1:c.T48C:p.S16S,ENSG00000146416:ENST00000367596:exon1:c.T48C:p.S16S,ENSG00000146416:ENST00000367598:exon1:c.T48C:p.S16S,ENSG00000146416:ENST00000447498:exon1:c.T48C:p.S16S,ENSG00000146416:ENST00000494282:exon1:c.T48C:p.S16S,ENSG00000146416:ENST00000367601:exon2:c.T36C:p.S12S	Score=664;Name=lod=667	NA	6q24.2	NA	Name=TAF1,E2F6_(H-50),YY1,Pol2,Pol2-4H8,E2F1,YY1_(C-20),HA-E2F1,HEY1,USF-1,TBP	Name=94	NA	rs7774011	0.27	0.27	0.228	0.308307	0.1113	0.499	0.255	0.2965	0.3681	0.12	0.44	0.27	0.3	0.1987	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.736109	1.736109	NA	0.11186	0.255561	NA	0.167	NA	8.2448066
828	16	3273905	3273905	C	T	exonic	ZNF200	NA	nonsynonymous SNV	ZNF200:NM_001145446:exon5:c.G1172A:p.R391Q,ZNF200:NM_001145447:exon5:c.G1172A:p.R391Q,ZNF200:NM_001145448:exon5:c.G1172A:p.R391Q,ZNF200:NM_003454:exon5:c.G1175A:p.R392Q,ZNF200:NM_198087:exon5:c.G1172A:p.R391Q,ZNF200:NM_198088:exon5:c.G1175A:p.R392Q	exonic	ENSG00000010539	NA	nonsynonymous SNV	ENSG00000010539:ENST00000396868:exon5:c.G1172A:p.R391Q,ENSG00000010539:ENST00000396870:exon5:c.G1172A:p.R391Q,ENSG00000010539:ENST00000396871:exon5:c.G1172A:p.R391Q,ENSG00000010539:ENST00000414144:exon5:c.G1175A:p.R392Q,ENSG00000010539:ENST00000431561:exon5:c.G1175A:p.R392Q,ENSG00000010539:ENST00000575948:exon5:c.G1172A:p.R391Q	NA	NA	16p13.3	NA	Name=E2F6_(H-50),KAP1,SETDB1	NA	NA	rs61731422	0.01	0.01	0.014	0.0109824	0.0298	0.001	0.0187	NA	0.0112	0.03	NA	0.02	NA	0.0235	0.037	0.19	T	0.005	B	0.002	B	0.313	N	1.000	N	0.55	N	3.43	T	-0.950	T	0.003	T	0.11	-0.282	2.65	-0.273	0.105	0.022	6.988	-0.282147	NA	0.04	0.036628	0.009786	NA	0.007	NA	8.2434054
828	18	71959075	71959075	G	A	exonic	CYB5A	NA	synonymous SNV	CYB5A:NM_001190807:exon1:c.C36T:p.Y12Y,CYB5A:NM_001914:exon1:c.C36T:p.Y12Y,CYB5A:NM_148923:exon1:c.C36T:p.Y12Y	exonic	ENSG00000166347	NA	synonymous SNV	ENSG00000166347:ENST00000340533:exon1:c.C36T:p.Y12Y,ENSG00000166347:ENST00000397914:exon1:c.C36T:p.Y12Y,ENSG00000166347:ENST00000494131:exon1:c.C36T:p.Y12Y	Score=391;Name=lod=52	NA	18q22.3	NA	Name=CTCF,Pol2,YY1_(C-20),NFKB,HEY1,Pol2-4H8	Name=2	NA	rs1051236	0.1	0.1	0.067	0.0952476	0.1322	0.0704	0.2046	0.0068	0.1247	0.14	0.09	0.15	0.02	0.1417	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.556736	1.556736	NA	0.150465	0.033818	NA	0.196	NA	8.2423016
828	5	167850748	167850748	A	G	exonic	WWC1	NA	synonymous SNV	WWC1:NM_001161661:exon11:c.A1485G:p.S495S,WWC1:NM_001161662:exon11:c.A1485G:p.S495S,WWC1:NM_015238:exon11:c.A1485G:p.S495S	exonic	ENSG00000113645	NA	synonymous SNV	ENSG00000113645:ENST00000265293:exon11:c.A1485G:p.S495S,ENSG00000113645:ENST00000521089:exon11:c.A1485G:p.S495S	NA	NA	5q34	Score=868;Name=V$ZID_01	NA	NA	NA	rs12054944	0.66	0.66	0.613	0.666733	0.4473	0.9921	0.6383	0.6657	0.5787	0.43	1	0.59	0.67	0.5444	1	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.039	T	0.000	T	.	0.687	7.67	-10.4	-2.954	-4.861	2.127	0.686728	NA	NA	0.433372	0.629596	ID=COSM449290;OCCURENCE=1(breast)	0.493	NA	8.2415946
828	11	62519565	62519565	G	C	exonic	ZBTB3	NA	nonsynonymous SNV	ZBTB3:NM_024784:exon2:c.C1722G:p.I574M	exonic	ENSG00000185670	NA	nonsynonymous SNV	ENSG00000185670:ENST00000394807:exon2:c.C1722G:p.I574M	NA	NA	11q12.3	NA	NA	NA	NA	rs544641	0.1	0.1	0.121	0.112819	0.0189	0.1518	0.0303	0.2504	0.0419	0.02	0.14	0.03	0.24	0.0505	0.24	0.08	T	0.119	B	0.037	B	.	.	1.000	P	0	N	2.52	T	-0.985	T	0.000	T	0.228	1.505	10.98	3.24	0.874	0.116	7.967	1.505033	1.505033	0	0.02268	0.206403	NA	0.101	NA	8.2412534
828	20	48524827	48524827	A	G	exonic	SPATA2	NA	synonymous SNV	SPATA2:NM_001135773:exon2:c.T201C:p.Y67Y,SPATA2:NM_006038:exon2:c.T201C:p.Y67Y	exonic	ENSG00000158480	NA	synonymous SNV	ENSG00000158480:ENST00000289431:exon2:c.T201C:p.Y67Y,ENSG00000158480:ENST00000422556:exon2:c.T201C:p.Y67Y	Score=599;Name=lod=362	NA	20q13.13	Score=882;Name=V$ATF6_01	Name=CTCF	Name=5	NA	rs2769982	0.49	0.49	0.436	0.490815	0.4503	0.7738	0.585	0.1316	0.6595	0.46	0.79	0.53	0.15	0.5141	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.697739	NA	NA	0.461395	0.191557	NA	0.362	NA	8.2408716
828	8	123964819	123964819	G	A	exonic	ZHX2	NA	nonsynonymous SNV	ZHX2:NM_014943:exon3:c.G1069A:p.V357M	exonic	ENSG00000178764	NA	nonsynonymous SNV	ENSG00000178764:ENST00000314393:exon3:c.G1069A:p.V357M	NA	NA	8q24.13	NA	NA	NA	NA	rs9649951	0.01	0.01	0.015	0.00998403	0.0258	0.001	0.0144	0.0015	0.0112	0.02	0.0017	0.03	0.002	0.0251	0.043	0.16	T	0.0	B	0.001	B	0.082	N	1.000	N	0.69	N	2.28	T	-1.016	T	0.007	T	0.021	0.49	6.657	1.42	0.008	1.466	8.569	0.489767	NA	0.1	0.043372	0.009305	NA	0.022	NA	8.2390614
828	9	2718534	2718534	C	G	exonic	KCNV2	NA	synonymous SNV	KCNV2:NM_133497:exon1:c.C795G:p.A265A	exonic	ENSG00000168263	NA	synonymous SNV	ENSG00000168263:ENST00000382082:exon1:c.C795G:p.A265A	Score=581;Name=lod=306	NA	9p24.2	Score=957;Name=V$ZIC1_01	NA	Name=5	NA	rs12237048	0.51	0.51	0.485	0.480032	0.4742	0.7173	0.549	0.3502	0.3681	0.48	0.73	0.51	0.31	0.4896	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.856401	NA	NA	0.464152	0.379744	ID=COSM455793;OCCURENCE=2(breast)	0.413	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000082511.1;CLNDSDB=.;CLNDSDBID=.	8.2387146
828	1	152285099	152285099	C	T	exonic	FLG	NA	nonsynonymous SNV	FLG:NM_002016:exon3:c.G2263A:p.E755K	exonic	ENSG00000143631	NA	nonsynonymous SNV	ENSG00000143631:ENST00000368799:exon3:c.G2263A:p.E755K	NA	NA	1q21.3	NA	NA	NA	NA	rs74129461	0.28	0.28	0.242	0.327676	0.171	0.6062	0.415	0.0681	0.4908	0.17	0.58	0.33	0.08	0.2559	0.58	0.15	T	0.808	P	0.224	B	.	.	1.000	P	2.44	M	5.83	T	-0.909	T	0.001	T	0.056	1.214	9.927	1.02	0.439	-0.308	3.539	1.213701	NA	0.05	0.167791	0.083522	NA	0.138	NA	8.2386424
828	4	2181080	2181080	T	C	exonic	POLN	NA	synonymous SNV	POLN:NM_181808:exon6:c.A1134G:p.T378T	exonic	ENSG00000130997	NA	synonymous SNV	ENSG00000130997:ENST00000382865:exon6:c.A1134G:p.T378T,ENSG00000130997:ENST00000511885:exon8:c.A1134G:p.T378T	NA	NA	4p16.3	NA	NA	NA	NA	rs6830513	0.31	0.31	0.314	0.321885	0.1243	0.373	0.2435	0.5703	0.1922	0.13	0.37	0.25	0.57	0.1896	0.57	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.931	T	0.000	T	.	-0.08	3.609	-7.45	-1.657	-0.832	1.677	-0.079915	NA	NA	0.115465	0.503858	NA	0.384	NA	8.2373016
829	2	121747406	121747406	G	A	exonic	GLI2	NA	nonsynonymous SNV	GLI2:NM_005270:exon13:c.G3916A:p.D1306N	exonic	ENSG00000074047	NA	nonsynonymous SNV	ENSG00000074047:ENST00000361492:exon13:c.G3916A:p.D1306N,ENSG00000074047:ENST00000452319:exon14:c.G3916A:p.D1306N	NA	NA	2q14.2	NA	NA	NA	NA	rs12711538	0.59	0.59	0.619	0.567093	0.7247	0.4712	0.5951	0.5681	0.4826	0.71	0.49	0.6	0.52	0.6464	0.73	.	.	0.0	B	0.0	B	0.454	N	1.000	P	-1.935	N	2.6	T	-1.028	T	0.000	T	0.003	-1.502	0.017	2.13	-0.006	2.156	9.052	-1.50203	NA	1	0.728309	0.576364	NA	0.406	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000081285.1;CLNDSDB=.;CLNDSDBID=.	8.2339244
829	4	15640168	15640168	C	T	exonic	FBXL5	NA	synonymous SNV	FBXL5:NM_001193534:exon4:c.G546A:p.K182K,FBXL5:NM_001193535:exon4:c.G495A:p.K165K,FBXL5:NM_012161:exon4:c.G546A:p.K182K	exonic	ENSG00000118564	NA	synonymous SNV	ENSG00000118564:ENST00000512066:exon3:c.G432A:p.K144K,ENSG00000118564:ENST00000341285:exon4:c.G546A:p.K182K,ENSG00000118564:ENST00000412094:exon4:c.G495A:p.K165K,ENSG00000118564:ENST00000503196:exon4:c.G381A:p.K127K,ENSG00000118564:ENST00000382358:exon5:c.G168A:p.K56K	Score=625;Name=lod=464	NA	4p15.32	NA	Name=CEBPB	NA	NA	rs3182730	0.1	0.1	0.076	0.0960463	0.1581	0.0337	0.0807	0.0696	0.1431	0.14	0.03	0.1	0.1	0.1292	0.15	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.067	T	0.001	T	.	0.751	7.981	1.79	0.080	0.528	10.394	0.751222	NA	NA	0.145465	0.073797	NA	0.043	NA	8.2339016
829	19	17660300	17660300	G	A	exonic	FAM129C	NA	nonsynonymous SNV	FAM129C:NM_001098524:exon15:c.G1807A:p.G603S,FAM129C:NM_173544:exon15:c.G1807A:p.G603S	exonic	ENSG00000167483	NA	nonsynonymous SNV	ENSG00000167483:ENST00000449408:exon13:c.G985A:p.G329S,ENSG00000167483:ENST00000599124:exon13:c.G1606A:p.G536S,ENSG00000167483:ENST00000352727:exon14:c.G1699A:p.G567S,ENSG00000167483:ENST00000599164:exon14:c.G1714A:p.G572S,ENSG00000167483:ENST00000601861:exon14:c.G1714A:p.G572S,ENSG00000167483:ENST00000332386:exon15:c.G1807A:p.G603S,ENSG00000167483:ENST00000335393:exon15:c.G1807A:p.G603S,ENSG00000167483:ENST00000595684:exon15:c.G1807A:p.G603S	NA	NA	19p13.11	NA	Name=SETDB1	NA	NA	rs11666267	0.41	0.41	0.409	0.402955	0.5537	0.3651	0.3818	0.3427	0.3834	0.54	0.31	0.41	0.34	0.4849	0.56	0.89	T	0.708	P	0.138	B	0.486	N	1.000	P	1.5	L	2.3	T	-0.954	T	0.000	T	0.072	0.627	7.374	1.68	0.729	1.228	5.607	0.627412	NA	0.17	0.561977	0.376532	ID=COSM148530;OCCURENCE=1(stomach)	0.478	NA	8.2327564
829	19	37488299	37488299	A	G	exonic	ZNF568	NA	nonsynonymous SNV	ZNF568:NM_001204839:exon9:c.A1514G:p.E505G,ZNF568:NM_001204838:exon10:c.A1706G:p.E569G	exonic	ENSG00000198453	NA	nonsynonymous SNV	ENSG00000198453:ENST00000455427:exon9:c.A1514G:p.E505G,ENSG00000198453:ENST00000444991:exon10:c.A1706G:p.E569G	NA	NA	19q13.12	Score=805;Name=V$CEBP_C	Name=ZNF274	NA	NA	rs1363752	0.47	0.47	0.44	0.496406	0.5109	0.25	0.5346	0.6006	0.5675	0.52	0.26	0.52	0.61	0.5898	0.61	1	T	0.0	B	0.0	B	.	.	0.293	P	-1.145	N	3.17	T	-0.964	T	0.000	T	0.111	-1.131	0.116	-0.878	-0.432	-0.155	8.648	-1.131469	NA	1	NA	NA	NA	0.493	NA	8.2326334
829	5	149212800	149212800	G	A	exonic	PPARGC1B	NA	synonymous SNV	PPARGC1B:NM_001172698:exon4:c.G1047A:p.P349P,PPARGC1B:NM_001172699:exon4:c.G972A:p.P324P,PPARGC1B:NM_133263:exon5:c.G1164A:p.P388P	exonic	ENSG00000155846	NA	synonymous SNV	ENSG00000155846:ENST00000360453:exon4:c.G1047A:p.P349P,ENSG00000155846:ENST00000403750:exon4:c.G972A:p.P324P,ENSG00000155846:ENST00000309241:exon5:c.G1164A:p.P388P,ENSG00000155846:ENST00000394320:exon5:c.G1164A:p.P388P	NA	NA	5q32	NA	NA	NA	NA	rs32577	0.11	0.11	0.119	0.139377	0.1412	0.0139	0.072	0.211	0.2178	0.14	0.02	0.07	0.23	0.1537	0.23	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-1.108	T	0.000	T	.	-1.447	0.02	-10.7	-4.177	-3.145	4.990	-1.446936	NA	NA	0.139651	0.226282	NA	0.123	NA	8.2321156
829	19	33882222	33882222	G	A	exonic	PEPD	NA	synonymous SNV	PEPD:NM_001166056:exon11:c.C1008T:p.H336H,PEPD:NM_001166057:exon11:c.C939T:p.H313H,PEPD:NM_000285:exon13:c.C1131T:p.H377H	exonic	ENSG00000124299	NA	synonymous SNV	ENSG00000124299:ENST00000397032:exon11:c.C1008T:p.H336H,ENSG00000124299:ENST00000436370:exon11:c.C939T:p.H313H,ENSG00000124299:ENST00000244137:exon13:c.C1131T:p.H377H	Score=493;Name=lod=135	NA	19q13.11	Score=887;Name=V$ATF6_01	Name=Pol2	NA	NA	rs17569	0.13	0.13	0.135	0.0984425	0.1392	0.2192	0.0562	0.0068	0.0859	0.15	0.25	0.07	0.01	0.1484	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.371724	1.371724	NA	0.147087	0.022781	NA	0.058	NA	8.2319796
829	11	64109118	64109118	T	G	exonic	CCDC88B	NA	nonsynonymous SNV	CCDC88B:NM_032251:exon7:c.T579G:p.D193E	exonic	ENSG00000168071	NA	nonsynonymous SNV	ENSG00000168071:ENST00000356786:exon7:c.T579G:p.D193E	Score=395;Name=lod=54	NA	11q13.1	NA	NA	NA	NA	rs647152	0.35	0.35	0.344	0.353035	0.3708	0.2401	0.3991	0.3502	0.4223	0.39	0.26	0.37	0.38	0.3707	0.39	1	T	0.0	B	0.0	B	.	.	0.000	P	-1.29	N	1.75	T	-0.929	T	0.000	T	0.056	-0.688	1.011	2.11	0.129	0.044	2.304	-0.687781	NA	1	0.360056	0.347134	ID=COSM429535;OCCURENCE=1(breast)	0.341	NA	8.2317774
829	19	12772090	12772090	C	T	exonic	MAN2B1	NA	nonsynonymous SNV	MAN2B1:NM_000528:exon7:c.G1010A:p.R337Q,MAN2B1:NM_001173498:exon7:c.G1010A:p.R337Q	exonic	ENSG00000104774	NA	nonsynonymous SNV	ENSG00000104774:ENST00000221363:exon7:c.G1010A:p.R337Q,ENSG00000104774:ENST00000456935:exon7:c.G1010A:p.R337Q	NA	NA	19p13.2	NA	NA	NA	NA	rs1133330	0.26	0.26	0.259	0.248403	0.3926	0.0615	0.255	0.3086	0.2065	0.38	0.05	0.29	0.28	0.3104	0.4	0.29	T	0.046	B	0.012	B	0.152	N	0.999	P	-0.035	N	-1.27	T	-1.100	T	0.000	T	0.041	1.83	12.08	-5.32	-0.929	-0.041	13.453	1.830324	1.830324	0.42	0.398953	0.312982	ID=COSM1582962;OCCURENCE=1(meninges)	0.283	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000079070.3;CLNDSDB=.;CLNDSDBID=.	8.2313804
829	9	78506187	78506187	T	C	exonic	PCSK5	NA	synonymous SNV	PCSK5:NM_001190482:exon1:c.T90C:p.C30C,PCSK5:NM_006200:exon1:c.T90C:p.C30C	exonic	ENSG00000099139	NA	synonymous SNV	ENSG00000099139:ENST00000376752:exon1:c.T90C:p.C30C,ENSG00000099139:ENST00000376767:exon1:c.T90C:p.C30C,ENSG00000099139:ENST00000545128:exon1:c.T90C:p.C30C	Score=698;Name=lod=913	NA	9q21.13	NA	Name=Pol2	Name=54	NA	rs7040769	0.18	0.18	0.19	0.192093	0.1441	NA	0.1124	0.525	0.046	0.14	NA	0.12	0.47	0.1493	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.905361	1.905361	NA	0.14314	0.462988	NA	0.181	NA	8.2301266
829	10	60588553	60588553	T	C	exonic	BICC1	NA	nonsynonymous SNV	BICC1:NM_001080512:exon21:c.T2827C:p.S943P	exonic	ENSG00000122870	NA	nonsynonymous SNV	ENSG00000122870:ENST00000373886:exon21:c.T2827C:p.S943P	Score=556;Name=lod=243	NA	10q21.1	NA	NA	NA	NA	rs4948550	0.64	0.64	0.61	0.607428	0.6909	0.7292	0.7334	0.3759	0.6196	0.71	0.74	0.7	0.36	0.7003	0.74	0.54	T	0.0	B	0.0	B	0.000	N	0.000	P	-0.695	N	1.77	T	-1.023	T	0.000	T	0.048	-0.193	3.062	3.93	0.833	3.586	9.783	-0.192996	NA	1	0.712442	0.44099	NA	0.601	NA	8.2296914
829	3	3139957	3139957	T	C	exonic	IL5RA	NA	nonsynonymous SNV	IL5RA:NM_001243099:exon6:c.A385G:p.I129V,IL5RA:NM_175726:exon6:c.A385G:p.I129V,IL5RA:NM_175727:exon6:c.A385G:p.I129V,IL5RA:NM_175728:exon6:c.A385G:p.I129V,IL5RA:NM_000564:exon7:c.A385G:p.I129V,IL5RA:NM_175724:exon7:c.A385G:p.I129V,IL5RA:NM_175725:exon7:c.A385G:p.I129V	exonic	ENSG00000091181	NA	nonsynonymous SNV	ENSG00000091181:ENST00000418488:exon4:c.A385G:p.I129V,ENSG00000091181:ENST00000383846:exon6:c.A385G:p.I129V,ENSG00000091181:ENST00000438560:exon6:c.A385G:p.I129V,ENSG00000091181:ENST00000445701:exon6:c.A385G:p.I129V,ENSG00000091181:ENST00000446632:exon6:c.A385G:p.I129V,ENSG00000091181:ENST00000456302:exon6:c.A385G:p.I129V,ENSG00000091181:ENST00000256452:exon7:c.A385G:p.I129V,ENSG00000091181:ENST00000311981:exon7:c.A385G:p.I129V,ENSG00000091181:ENST00000430514:exon7:c.A385G:p.I129V	NA	NA	3p26.2	NA	NA	NA	NA	rs2290610	0.38	0.38	0.375	0.428115	0.3489	0.4097	0.3991	0.4047	0.5808	0.34	0.37	0.41	0.44	0.3884	0.45	1	T	0.001	B	0.003	B	0.531	N	1.000	P	-0.195	N	0.6	T	-0.967	T	0.000	T	0.102	-2.617	0	-4.22	-1.344	-0.613	12.851	-2.61711	NA	1	0.366512	0.391739	NA	0.413	NA	8.2295214
829	8	145154910	145154910	G	A	exonic	SHARPIN	NA	nonsynonymous SNV	SHARPIN:NM_030974:exon3:c.C439T:p.P147S	exonic	ENSG00000179526	NA	nonsynonymous SNV	ENSG00000179526:ENST00000359551:exon3:c.C439T:p.P147S,ENSG00000179526:ENST00000398712:exon3:c.C439T:p.P147S	NA	NA	8q24.3	NA	NA	NA	NA	rs11541805	0.02	0.02	0.008	0.0123802	0.0408	0.001	0.0202	0.0023	0.0031	0.04	NA	0.02	0.0041	0.0255	0.04	0.27	T	0.036	B	0.021	B	0.000	N	1.000	N	0.77	N	1.94	T	-1.062	T	0.016	T	0.056	-0.144	3.296	2.73	0.855	0.245	6.261	-0.143979	NA	0.31	0.038052	0.00725	NA	0.014	NA	8.2289814
829	15	85447431	85447431	G	A	exonic	SLC28A1	NA	nonsynonymous SNV	SLC28A1:NM_004213:exon7:c.G565A:p.V189I	exonic	ENSG00000156222	NA	nonsynonymous SNV	ENSG00000156222:ENST00000286749:exon6:c.G565A:p.V189I,ENSG00000156222:ENST00000538177:exon6:c.G565A:p.V189I,ENSG00000156222:ENST00000394573:exon7:c.G565A:p.V189I,ENSG00000156222:ENST00000537216:exon7:c.G565A:p.V189I,ENSG00000156222:ENST00000537624:exon7:c.G565A:p.V189I,ENSG00000156222:ENST00000537703:exon7:c.G331A:p.V111I	NA	NA	15q25.3	NA	NA	NA	NA	rs2290272	0.35	0.35	0.303	0.383187	0.3638	0.375	0.5058	0.1914	0.5838	0.38	0.36	0.48	0.19	0.3912	0.48	1	T	0.035	B	0.024	B	0.160	N	0.001	P	-0.585	N	2.7	T	-1.039	T	0.000	T	0.084	-2.044	0.006	-5.87	-1.600	-0.604	9.469	-2.04395	NA	1	0.35043	0.218339	ID=COSM147964;OCCURENCE=1(stomach)	0.348	NA	8.2279034
830	3	53906513	53906513	G	A	exonic	ACTR8	NA	synonymous SNV	ACTR8:NM_022899:exon10:c.C1200T:p.I400I	exonic	ENSG00000113812	NA	synonymous SNV	ENSG00000113812:ENST00000231909:exon5:c.C315T:p.I105I,ENSG00000113812:ENST00000335754:exon10:c.C1200T:p.I400I,ENSG00000113812:ENST00000482349:exon10:c.C867T:p.I289I	Score=514;Name=lod=163	NA	3p21.1	NA	NA	NA	NA	rs4687757	0.66	0.66	0.68	0.690296	0.4513	0.9444	0.6196	0.7118	0.6953	0.43	0.95	0.62	0.73	0.554	0.95	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.044	T	0.000	T	.	-0.087	3.572	-4.73	-1.434	0.244	15.723	-0.087344	NA	NA	0.438256	0.670903	NA	0.674	NA	8.2231106
830	19	7571030	7571030	T	A	exonic	C19orf45	NA	nonsynonymous SNV	C19orf45:NM_198534:exon7:c.T1186A:p.Y396N	exonic	ENSG00000198723	NA	nonsynonymous SNV	ENSG00000198723:ENST00000361664:exon7:c.T1186A:p.Y396N	NA	NA	19p13.2	NA	Name=HEY1,AP-2gamma,IRF1,USF-1,Sin3Ak-20,Pol2-4H8,Max,USF2,Mxi1_(bHLH),Pol2	NA	NA	rs3826736	0.42	0.42	0.424	0.403554	0.3728	0.3165	0.4035	0.5613	0.3119	0.38	0.31	0.44	0.58	0.3678	0.58	0.35	T	0.0	B	0.0	B	0.773	N	1.000	P	-1.78	N	2.69	T	-0.957	T	0.000	T	0.022	0.474	6.574	2.35	0.196	0.098	2.809	0.474265	NA	1	0.37	0.528143	NA	0.457	NA	8.2227334
830	2	26534801	26534801	G	A	exonic	GPR113	NA	nonsynonymous SNV	GPR113:NM_153835:exon8:c.C1198T:p.H400Y,GPR113:NM_001145169:exon10:c.C1588T:p.H530Y,GPR113:NM_001145168:exon11:c.C1795T:p.H599Y	exonic	ENSG00000173567	NA	nonsynonymous SNV	ENSG00000173567:ENST00000541401:exon5:c.C604T:p.H202Y,ENSG00000173567:ENST00000333478:exon8:c.C1198T:p.H400Y,ENSG00000173567:ENST00000447444:exon8:c.C1198T:p.H400Y,ENSG00000173567:ENST00000421160:exon10:c.C1588T:p.H530Y,ENSG00000173567:ENST00000311519:exon11:c.C1795T:p.H599Y	NA	NA	2p23.3	NA	NA	NA	NA	rs7568529	0.72	0.72	0.701	0.671326	0.7028	0.754	0.7219	0.6195	0.5879	0.72	0.8	0.7	0.64	0.6956	0.8	0.28	T	0.012	B	0.071	B	.	.	0.998	P	1.67	L	2.96	T	-0.968	T	0.000	T	0.124	0.304	5.647	5.18	2.906	2.306	9.522	0.303959	NA	0.04	0.714651	0.626872	NA	0.507	NA	8.2202824
830	4	141598126	141598126	C	T	exonic	TBC1D9	NA	synonymous SNV	TBC1D9:NM_015130:exon6:c.G981A:p.Q327Q	exonic	ENSG00000109436	NA	synonymous SNV	ENSG00000109436:ENST00000442267:exon6:c.G981A:p.Q327Q	Score=663;Name=lod=662	NA	4q31.21	Score=837;Name=V$TAL1BETAE47_01	NA	NA	Score=152;Name=1798264_0_-_152	rs2303911	0.14	0.14	0.113	0.100439	0.1581	0.0853	0.072	0.0991	0.0787	0.18	0.11	0.11	0.12	0.1382	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.07173	NA	NA	0.150932	0.115726	NA	0.087	NA	8.2194346
830	1	43119661	43119661	C	A	exonic	CCDC30	NA	nonsynonymous SNV	CCDC30:NM_001080850:exon16:c.C2314A:p.H772N	exonic	ENSG00000186409	NA	nonsynonymous SNV	ENSG00000186409:ENST00000390640:exon12:c.C1681A:p.H561N,ENSG00000186409:ENST00000340612:exon15:c.C2314A:p.H772N,ENSG00000186409:ENST00000507855:exon15:c.C1681A:p.H561N,ENSG00000186409:ENST00000342022:exon16:c.C2314A:p.H772N,ENSG00000186409:ENST00000428554:exon23:c.C2314A:p.H772N,ENSG00000186409:ENST00000477155:exon23:c.C1408A:p.H470N	NA	NA	1p34.2	NA	NA	NA	NA	rs16829829	0.06	0.06	0.053	0.0746805	0.0328	0.001	0.0389	0.1853	0.0695	0.03	NA	0.06	0.16	0.0449	0.16	0.04	D	0.007	B	0.005	B	0.880	N	1.000	P	0.895	L	0.87	T	-1.064	T	0.000	T	0.062	0.121	4.652	1.38	-0.002	-0.372	4.642	0.121203	NA	0	0.037326	0.154108	NA	0.043	NA	8.2183074
830	1	213009469	213009469	A	G	exonic	C1orf227	NA	nonsynonymous SNV	C1orf227:NM_001024601:exon2:c.T23C:p.I8T	exonic	ENSG00000185523	NA	nonsynonymous SNV	ENSG00000185523:ENST00000332912:exon2:c.T23C:p.I8T	NA	NA	1q32.3	NA	NA	NA	NA	rs10864004	0.67	0.67	0.675	0.660543	0.7366	0.5407	0.464	0.7943	0.6646	0.75	0.54	0.53	0.82	0.672	0.82	1	T	0.0	B	0.0	B	0.041	N	1.000	P	.	.	0.97	T	-1.041	T	0.000	T	0.017	-2.892	0.001	-8.99	-5.519	-5.805	3.346	-2.892131	NA	0.97	0.707238	0.796868	NA	0.71	NA	8.2174954
830	12	988894	988894	G	A	exonic	WNK1	NA	synonymous SNV	WNK1:NM_018979:exon11:c.G2529A:p.Q843Q	exonic	ENSG00000060237	NA	synonymous SNV	ENSG00000060237:ENST00000535698:exon3:c.G339A:p.Q113Q,ENSG00000060237:ENST00000340908:exon8:c.G1308A:p.Q436Q,ENSG00000060237:ENST00000315939:exon11:c.G2529A:p.Q843Q,ENSG00000060237:ENST00000530271:exon13:c.G4023A:p.Q1341Q	Score=433;Name=lod=77	NA	12p13.33	Score=818;Name=V$OCT1_01	NA	Name=61	NA	rs9804992	0.13	0.13	0.123	0.145767	0.1382	0.1091	0.2003	0.1203	0.1871	0.14	0.11	0.18	0.1	0.1542	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.041474	NA	NA	0.15686	0.13005	ID=COSM147388;OCCURENCE=1(stomach)	0.239	NA	8.2174066
830	2	225346646	225346646	T	C	exonic	CUL3	NA	synonymous SNV	CUL3:NM_001257197:exon13:c.A1794G:p.Q598Q,CUL3:NM_001257198:exon14:c.A2010G:p.Q670Q,CUL3:NM_003590:exon14:c.A1992G:p.Q664Q	exonic	ENSG00000036257	NA	synonymous SNV	ENSG00000036257:ENST00000344951:exon13:c.A1794G:p.Q598Q,ENSG00000036257:ENST00000264414:exon14:c.A1992G:p.Q664Q,ENSG00000036257:ENST00000409096:exon14:c.A1920G:p.Q640Q,ENSG00000036257:ENST00000409777:exon14:c.A1920G:p.Q640Q	Score=658;Name=lod=627	NA	2q36.2	Score=889;Name=V$CDP_02	NA	NA	Score=128;Name=1376849_0_+_128	rs2070127	0.2	0.2	0.181	0.232628	0.1312	0.2401	0.2262	0.2534	0.3057	0.13	0.24	0.22	0.23	0.1845	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.827549	NA	NA	0.133605	0.253972	NA	0.188	NA	8.2173616
830	3	10089723	10089723	G	A	exonic	FANCD2	NA	synonymous SNV	FANCD2:NM_001018115:exon16:c.G1401A:p.T467T,FANCD2:NM_033084:exon16:c.G1401A:p.T467T	exonic	ENSG00000144554	NA	synonymous SNV	ENSG00000144554:ENST00000287647:exon16:c.G1401A:p.T467T,ENSG00000144554:ENST00000383806:exon16:c.G1401A:p.T467T,ENSG00000144554:ENST00000383807:exon16:c.G1401A:p.T467T,ENSG00000144554:ENST00000419585:exon16:c.G1401A:p.T467T	Score=483;Name=lod=122	NA	3p25.3	NA	Name=p300,ERalpha_a,FOXA1_(C-20)	Name=9	NA	rs12330369	NA	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4495	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.556858	NA	NA	NA	NA	NA	NA	NA	8.2171666
830	6	12164612	12164612	C	G	exonic	HIVEP1	NA	nonsynonymous SNV	HIVEP1:NM_002114:exon9:c.C8075G:p.A2692G	exonic	ENSG00000095951	NA	nonsynonymous SNV	ENSG00000095951:ENST00000541134:exon4:c.C1670G:p.A557G,ENSG00000095951:ENST00000379388:exon9:c.C8075G:p.A2692G	NA	NA	6p24.1	NA	NA	Name=37	NA	rs1042054	0.03	0.03	0.022	0.0283546	0.0408	0.0248	0.0418	0.0083	0.0368	0.04	0.02	0.05	0.002	0.0363	0.05	0.53	T	0.0	B	0.0	B	0.320	N	1.000	N	0.895	L	3.0	T	-0.936	T	0.014	T	0.037	0.041	4.229	-0.348	-0.781	0.027	4.572	0.041377	NA	NA	0.039108	0.013026	NA	0.022	NA	8.2171254
830	2	118575215	118575215	C	G	exonic	DDX18	NA	nonsynonymous SNV	DDX18:NM_006773:exon2:c.C281G:p.T94S	exonic	ENSG00000088205	NA	nonsynonymous SNV	ENSG00000088205:ENST00000263239:exon2:c.C281G:p.T94S	Score=251;Name=lod=14	NA	2q14.1	NA	NA	NA	NA	rs1052637	0.38	0.38	0.382	0.426917	0.3688	0.2282	0.3602	0.6263	0.4693	0.37	0.22	0.35	0.61	0.3822	0.61	0.93	T	0.02	B	0.006	B	0.032	N	0.997	P	1.78	L	2.03	T	-0.908	T	0.000	T	0.054	0.356	5.931	2.2	0.480	0.094	6.210	0.355794	NA	0.52	0.365465	0.579019	NA	0.464	NA	8.2168684
830	12	14993439	14993439	C	T	exonic	ART4	NA	nonsynonymous SNV	ART4:NM_021071:exon2:c.G793A:p.D265N	exonic	ENSG00000111339	NA	nonsynonymous SNV	ENSG00000111339:ENST00000228936:exon2:c.G793A:p.D265N,ENSG00000111339:ENST00000420600:exon2:c.G742A:p.D248N	Score=278;Name=lod=18	NA	12p12.3	NA	NA	NA	NA	rs11276	0.28	0.28	0.256	0.292732	0.3728	0.0982	0.3746	0.2685	0.3855	0.36	0.09	0.41	0.28	0.349	0.41	1	T	0.0	B	0.001	B	0.011	N	0.000	P	.	.	3.22	T	-0.934	T	0.000	T	0.016	-1.813	0.009	1.07	-0.052	0.311	0.553	-1.812577	NA	1	0.395349	0.279165	ID=COSM147449;OCCURENCE=1(stomach),1(large_intestine)	0.428	CLINSIG=pathogenic;CLNDBN=DOMBROCK_BLOOD_GROUP;CLNREVSTAT=single;CLNACC=RCV000019304.26;CLNDSDB=.;CLNDSDBID=.	8.2161844
830	17	55183813	55183813	A	G	exonic	AKAP1	NA	nonsynonymous SNV	AKAP1:NM_003488:exon2:c.A988G:p.S330G,AKAP1:NM_001242902:exon3:c.A988G:p.S330G,AKAP1:NM_001242903:exon3:c.A988G:p.S330G	exonic	ENSG00000121057	NA	nonsynonymous SNV	ENSG00000121057:ENST00000314126:exon2:c.A988G:p.S330G,ENSG00000121057:ENST00000337714:exon2:c.A988G:p.S330G,ENSG00000121057:ENST00000481416:exon2:c.A988G:p.S330G,ENSG00000121057:ENST00000539273:exon2:c.A988G:p.S330G,ENSG00000121057:ENST00000572557:exon2:c.A988G:p.S330G,ENSG00000121057:ENST00000571629:exon3:c.A988G:p.S330G	NA	NA	17q22	NA	NA	NA	NA	rs34535433	0.05	0.05	0.06	0.0744808	0.1123	0.006	0.0504	0.1142	0.0695	0.08	0.01	0.03	0.08	0.0052	0.08	0.65	T	0.0	B	0.0	B	.	.	1.000	P	0	N	2.63	T	-0.926	T	0.001	T	0.074	0.033	4.183	-2.24	-0.573	0.675	7.475	0.032588	NA	0.42	NA	NA	NA	0.022	NA	8.2158334
831	19	52249947	52249947	C	G	exonic	FPR1	NA	nonsynonymous SNV	FPR1:NM_002029:exon2:c.G301C:p.V101L,FPR1:NM_001193306:exon3:c.G301C:p.V101L	exonic	ENSG00000171051	NA	nonsynonymous SNV	ENSG00000171051:ENST00000304748:exon2:c.G301C:p.V101L,ENSG00000171051:ENST00000600815:exon2:c.G301C:p.V101L,ENSG00000171051:ENST00000595042:exon3:c.G301C:p.V101L	NA	NA	19q13.41	NA	NA	NA	NA	rs2070745	0.39	0.39	0.343	0.39377	0.3718	0.4861	0.4986	0.3086	0.362	0.38	0.47	0.46	0.26	0.3891	0.47	0.46	T	0.001	B	0.023	B	0.000	D	1.000	P	1.85	L	1.24	T	-0.917	T	0.000	T	0.054	-1.369	0.026	-2.04	-0.599	0.065	3.432	-1.368558	NA	0.14	0.357558	0.315252	ID=COSM148708;OCCURENCE=1(stomach),1(large_intestine)	0.486	NA	8.2148754
831	7	82764425	82764425	C	G	exonic	PCLO	NA	nonsynonymous SNV	PCLO:NM_014510:exon3:c.G2441C:p.S814T,PCLO:NM_033026:exon3:c.G2441C:p.S814T	exonic	ENSG00000186472	NA	nonsynonymous SNV	ENSG00000186472:ENST00000333891:exon3:c.G2441C:p.S814T,ENSG00000186472:ENST00000423517:exon3:c.G2441C:p.S814T	NA	NA	7q21.11	NA	NA	NA	NA	rs2877	0.78	0.78	0.77	0.808307	0.6839	0.9931	0.781	0.6936	0.9202	0.69	1	0.77	0.67	0.7546	1	0	D	0.0	B	0.0	B	.	.	1.000	P	-0.895	N	2.36	T	-0.968	T	0.000	T	0.035	-1.187	0.079	3.89	0.863	1.287	1.081	-1.186532	NA	1	0.680664	0.709052	NA	0.775	NA	8.2141694
831	6	46977783	46977783	C	T	exonic	GPR110	NA	nonsynonymous SNV	GPR110:NM_153840:exon11:c.G1388A:p.R463H	exonic	ENSG00000153292	NA	nonsynonymous SNV	ENSG00000153292:ENST00000283297:exon5:c.G797A:p.R266H,ENSG00000153292:ENST00000371253:exon11:c.G1388A:p.R463H	NA	NA	6p12.3	NA	NA	NA	NA	rs45598235	0.04	0.04	0.051	0.0371406	0.0447	NA	0.0389	0.0787	0.0102	0.04	NA	0.04	0.09	0.0365	0.09	0.21	T	0.0	B	0.0	B	0.369	N	1.000	N	-0.64	N	1.37	T	-1.003	T	0.013	T	0.017	0.799	8.205	-3.63	-0.181	-0.885	6.970	0.79893	NA	0.56	0.03814	0.085792	NA	0.058	NA	8.2139934
831	17	40822678	40822678	C	T	exonic	PLEKHH3	NA	synonymous SNV	PLEKHH3:NM_024927:exon10:c.G1467A:p.G489G	exonic	ENSG00000068137	NA	synonymous SNV	ENSG00000068137:ENST00000293349:exon10:c.G1458A:p.G486G,ENSG00000068137:ENST00000412503:exon10:c.G1458A:p.G486G,ENSG00000068137:ENST00000591022:exon10:c.G1467A:p.G489G,ENSG00000068137:ENST00000591196:exon10:c.G1467A:p.G489G	Score=519;Name=lod=171	NA	17q21.2	Score=943;Name=V$PAX4_03	NA	Name=5	NA	rs2277618	0.23	0.23	0.189	0.212859	0.1421	0.5347	0.2378	0.0098	0.2106	0.15	0.54	0.22	0.02	0.1847	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.432917	1.432917	NA	0.12593	0.031775	NA	0.072	NA	8.2139366
831	17	72937605	72937605	G	A	exonic	OTOP3	NA	nonsynonymous SNV	OTOP3:NM_001272005:exon2:c.G137A:p.R46Q,OTOP3:NM_178233:exon2:c.G191A:p.R64Q	exonic	ENSG00000182938	NA	nonsynonymous SNV	ENSG00000182938:ENST00000328801:exon2:c.G191A:p.R64Q	NA	NA	17q25.1	NA	NA	NA	NA	rs7210616	0.61	0.61	0.616	0.5627	0.7326	0.5665	0.6902	0.3351	0.6012	0.76	0.62	0.68	0.35	0.6686	0.76	0.32	T	0.008	B	0.001	B	0.023	N	1.000	P	0.69	N	3.05	T	-0.988	T	0.000	T	0.042	1.062	9.338	-9.71	-2.531	-2.067	7.185	1.062352	NA	0.25	0.718961	0.409855	ID=COSM330355;OCCURENCE=1(haematopoietic_and_lymphoid_tissue),1(large_intestine)	0.471	NA	8.2131724
831	19	10672493	10672493	C	T	exonic	KRI1	NA	nonsynonymous SNV	KRI1:NM_023008:exon5:c.G430A:p.G144R	exonic	ENSG00000129347	NA	nonsynonymous SNV	ENSG00000129347:ENST00000361821:exon4:c.G418A:p.G140R,ENSG00000129347:ENST00000312962:exon5:c.G430A:p.G144R,ENSG00000129347:ENST00000539027:exon5:c.G403A:p.G135R	Score=414;Name=lod=64	NA	19p13.2	NA	NA	NA	NA	rs12984043	0.27	0.27	0.249	0.261581	0.4036	0.2034	0.2522	0.1362	0.3517	0.4	0.19	0.3	0.14	0.3376	0.4	0.41	T	0.05	B	0.005	B	0.051	N	0.988	P	1.845	L	1.47	T	-0.932	T	0.000	T	0.258	0.518	6.809	1.67	0.888	3.193	8.125	0.518267	NA	0.36	0.379651	0.171584	ID=COSM148508;OCCURENCE=1(stomach)	0.37	NA	8.2124824
831	17	73513289	73513289	C	G	exonic	TSEN54	NA	synonymous SNV	TSEN54:NM_207346:exon4:c.C333G:p.R111R	exonic	ENSG00000182173	NA	synonymous SNV	ENSG00000182173:ENST00000434205:exon3:c.C30G:p.R10R,ENSG00000182173:ENST00000583173:exon3:c.C168G:p.R56R,ENSG00000182173:ENST00000583818:exon3:c.C228G:p.R76R,ENSG00000182173:ENST00000333213:exon4:c.C333G:p.R111R	Score=405;Name=lod=59	NA	17q25.1	NA	Name=Sin3Ak-20,ELF1_(SC-631)	Name=43	NA	rs6501818	0.16	0.16	0.153	0.163139	0.1421	0.0298	0.1066	0.351	0.1084	0.14	0.03	0.15	0.37	0.1816	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.333558	1.333558	NA	0.131426	0.330451	NA	0.275	NA	8.2115406
831	17	64222164	64222164	C	T	exonic	APOH	NA	nonsynonymous SNV	APOH:NM_000042:exon3:c.G320A:p.S107N	exonic	ENSG00000091583	NA	nonsynonymous SNV	ENSG00000091583:ENST00000205948:exon3:c.G320A:p.S107N,ENSG00000091583:ENST00000581797:exon3:c.G140A:p.S47N,ENSG00000091583:ENST00000577982:exon4:c.G320A:p.S107N	NA	NA	17q24.2	NA	NA	NA	NA	rs1801692	0.03	0.03	0.021	0.0289537	0.0388	0.0327	0.0173	0.0113	0.047	0.04	0.02	0.03	0.01	0.0406	0.045	0.67	T	0.0	B	0.001	B	0.005	N	1.000	N	0.6	N	-0.13	T	-1.075	T	0.018	T	0.146	0.633	7.401	-2.29	-0.189	-0.665	6.596	0.632672	NA	0.8	0.045465	0.015433	NA	0.007	NA	8.2084684
831	5	96086334	96086334	G	C	exonic	CAST	NA	nonsynonymous SNV	CAST:NM_173060:exon17:c.G1157C:p.C386S,CAST:NM_001042440:exon18:c.G1349C:p.C450S,CAST:NM_001190442:exon19:c.G1184C:p.C395S	exonic	ENSG00000153113	NA	nonsynonymous SNV	ENSG00000153113:ENST00000515663:exon5:c.G392C:p.C131S,ENSG00000153113:ENST00000508579:exon6:c.G368C:p.C123S,ENSG00000153113:ENST00000504465:exon15:c.G1007C:p.C336S,ENSG00000153113:ENST00000509903:exon16:c.G1118C:p.C373S,ENSG00000153113:ENST00000309190:exon17:c.G1157C:p.C386S,ENSG00000153113:ENST00000325674:exon18:c.G1367C:p.C456S,ENSG00000153113:ENST00000341926:exon18:c.G1223C:p.C408S,ENSG00000153113:ENST00000395812:exon18:c.G1349C:p.C450S,ENSG00000153113:ENST00000510156:exon18:c.G1223C:p.C408S,ENSG00000153113:ENST00000511049:exon18:c.G1181C:p.C394S,ENSG00000153113:ENST00000511782:exon18:c.G1181C:p.C394S,ENSG00000153113:ENST00000338252:exon19:c.G1184C:p.C395S,ENSG00000153113:ENST00000359176:exon19:c.G1415C:p.C472S,ENSG00000153113:ENST00000508608:exon19:c.G1361C:p.C454S,ENSG00000153113:ENST00000510756:exon19:c.G1406C:p.C469S,ENSG00000153113:ENST00000395813:exon20:c.G1472C:p.C491S,ENSG00000153113:ENST00000508830:exon21:c.G1472C:p.C491S	NA	NA	5q15	NA	NA	NA	NA	rs754615	0.3	0.3	0.293	0.29373	0.4105	0.1161	0.2911	0.3064	0.3415	0.4	0.15	0.33	0.3	0.3337	0.4	0.97	T	0.0	B	0.001	B	0.954	N	1.000	P	-2.305	N	2.5	T	-0.954	T	0.000	T	0.195	0.284	5.535	4.46	0.719	0.989	12.606	0.283691	NA	0.8	0.381163	0.322288	NA	0.283	NA	8.2079704
831	9	2828742	2828742	C	A	exonic	KIAA0020	NA	nonsynonymous SNV	KIAA0020:NM_014878:exon9:c.G889T:p.V297L	exonic	ENSG00000080608	NA	nonsynonymous SNV	ENSG00000080608:ENST00000397885:exon9:c.G889T:p.V297L	Score=586;Name=lod=322	NA	9p24.2	NA	NA	NA	NA	rs2270891	0.05	0.05	0.047	0.048722	0.0427	0.0615	0.0576	0.0499	0.0337	0.04	0.08	0.04	0.04	0.0431	0.08	0.3	T	0.0	B	0.0	B	0.126	N	0.999	N	0.345	N	2.72	T	-0.963	T	0.001	T	0.055	2.217	13.37	0.669	-0.063	0.634	7.629	2.216896	2.216896	NA	0.039651	0.049523	NA	0.087	NA	8.2078824
831	2	225750861	225750861	C	T	exonic	DOCK10	NA	synonymous SNV	DOCK10:NM_014689:exon6:c.G531A:p.A177A	exonic	ENSG00000135905	NA	synonymous SNV	ENSG00000135905:ENST00000258390:exon6:c.G531A:p.A177A,ENSG00000135905:ENST00000409592:exon6:c.G513A:p.A171A	NA	NA	2q36.2	Score=726;Name=V$PAX4_04	Name=YY1,c-Fos	Name=115	NA	rs2304336	0.19	0.19	0.227	0.224241	0.1412	0.0556	0.0937	0.5272	0.1667	0.14	0.06	0.08	0.49	0.1676	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.04277	NA	NA	0.150742	0.471503	NA	0.341	NA	8.2071246
831	17	18923180	18923180	C	T	exonic	SLC5A10	NA	nonsynonymous SNV	SLC5A10:NM_001270648:exon12:c.C1484T:p.A495V,SLC5A10:NM_001270649:exon12:c.C1457T:p.A486V,SLC5A10:NM_001042450:exon13:c.C1565T:p.A522V,SLC5A10:NM_152351:exon13:c.C1613T:p.A538V	exonic	ENSG00000154025	NA	nonsynonymous SNV	ENSG00000154025:ENST00000395643:exon12:c.C1484T:p.A495V,ENSG00000154025:ENST00000417251:exon12:c.C1457T:p.A486V,ENSG00000154025:ENST00000317977:exon13:c.C1475T:p.A492V,ENSG00000154025:ENST00000395642:exon13:c.C1475T:p.A492V,ENSG00000154025:ENST00000395645:exon13:c.C1565T:p.A522V,ENSG00000154025:ENST00000395647:exon13:c.C1613T:p.A538V	NA	NA	17p11.2	NA	NA	NA	NA	rs12604020	0.11	0.11	0.116	0.148363	0.0298	0.1339	0.0634	0.3064	0.1319	0.03	0.14	0.06	0.26	0.0756	0.26	0.59	T	0.0	B	0.002	B	0.891	N	1.000	P	0.27	N	-2.04	D	-1.130	T	0.000	T	0.117	0.326	5.769	0.090	-0.206	-0.686	9.178	0.326227	NA	0.51	0.020814	0.257376	NA	0.152	NA	8.2071194
831	19	8808942	8808942	A	G	exonic	ACTL9	NA	nonsynonymous SNV	ACTL9:NM_178525:exon1:c.T110C:p.F37S	exonic	ENSG00000181786	NA	nonsynonymous SNV	ENSG00000181786:ENST00000324436:exon1:c.T110C:p.F37S	NA	NA	19p13.2	NA	NA	NA	NA	rs2340550	0.78	0.78	0.772	0.791733	0.7117	0.874	0.7233	0.7995	0.8272	0.71	0.86	0.73	0.81	0.7357	0.86	0.03	D	0.0	B	0.0	B	0.138	N	1.000	P	0	N	-3.4	D	-0.870	T	0.000	T	0.018	-0.81	0.649	2.06	0.347	0.444	6.063	-0.810376	NA	0.56	0.679371	0.786006	NA	0.652	NA	8.2065624
831	9	4625415	4625415	T	C	exonic	SPATA6L	NA	nonsynonymous SNV	SPATA6L:NM_001039395:exon5:c.A407G:p.H136R	exonic	ENSG00000106686	NA	nonsynonymous SNV	ENSG00000106686:ENST00000475086:exon5:c.A407G:p.H136R,ENSG00000106686:ENST00000461761:exon6:c.A581G:p.H194R,ENSG00000106686:ENST00000381890:exon7:c.A623G:p.H208R,ENSG00000106686:ENST00000454239:exon7:c.A581G:p.H194R,ENSG00000106686:ENST00000381895:exon9:c.A212G:p.H71R	NA	NA	9p24.1	NA	NA	NA	NA	rs45463394	0.06	0.06	0.054	0.0714856	0.0398	0.0149	0.0922	0.1089	0.0971	0.04	0.02	0.09	0.13	0.0499	0.13	1	T	0.0	B	0.001	B	0.005	N	1.000	N	-1.59	N	2.67	T	-0.974	T	0.000	T	0.022	-1.264	0.047	2.3	0.271	-0.055	7.994	-1.263688	NA	1	0.037549	0.097177	NA	0.101	NA	8.2060844
831	4	187630597	187630597	C	G	exonic	FAT1	NA	nonsynonymous SNV	FAT1:NM_005245:exon2:c.G385C:p.V129L	exonic	ENSG00000083857	NA	nonsynonymous SNV	ENSG00000083857:ENST00000441802:exon2:c.G385C:p.V129L,ENSG00000083857:ENST00000509647:exon2:c.G385C:p.V129L	NA	NA	4q35.2	NA	NA	NA	NA	rs41278611	0.02	0.02	0.024	0.0241613	0.0517	NA	0.0274	NA	0.0511	0.05	NA	0.03	NA	0.0338	0.05	0.93	T	0.0	B	0.001	B	0.067	N	1.000	N	-2.2	N	0.19	T	-0.999	T	0.006	T	0.208	-3.447	0.001	2.49	0.074	0.856	10.124	-3.446832	NA	1	0.042667	0.007824	NA	0.029	NA	8.2051664
832	2	95537622	95537622	A	G	exonic	TEKT4	NA	nonsynonymous SNV	TEKT4:NM_144705:exon1:c.A298G:p.S100G	exonic	ENSG00000163060	NA	nonsynonymous SNV	ENSG00000163060:ENST00000295201:exon1:c.A298G:p.S100G,ENSG00000163060:ENST00000427593:exon1:c.A298G:p.S100G	Score=467;Name=lod=105	NA	2q11.1	NA	Name=SUZ12	NA	NA	rs11164112	0.41	0.41	0.345	0.427516	0.3419	0.4881	0.4467	0.5166	0.319	0.32	0.46	0.38	0.5	0.4214	0.5	0.32	T	0.0	B	0.0	B	0.257	N	1.000	P	-1.04	N	4.24	T	-1.036	T	0.000	T	0.074	-1.236	0.056	-0.615	-0.228	0.388	3.668	-1.235674	NA	0.21	0.365649	0.490644	NA	0.188	NA	8.2043844
832	12	101561940	101561940	A	T	exonic	SLC5A8	NA	synonymous SNV	SLC5A8:NM_145913:exon11:c.T1254A:p.G418G	exonic	ENSG00000256870	NA	synonymous SNV	ENSG00000256870:ENST00000536262:exon11:c.T1254A:p.G418G	Score=542;Name=lod=212	NA	12q23.1	Score=837;Name=V$BRN2_01	Name=MafF_(M8194),MafK_(SC-477),MafK_(ab50322)	NA	NA	rs9634221	0.22	0.22	0.225	0.192891	0.1362	0.5427	0.0807	0.0703	0.136	0.14	0.53	0.09	0.09	0.1942	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.433087	1.433087	NA	0.132674	0.069451	NA	0.116	NA	8.2035926
832	2	201354935	201354935	C	G	exonic	KCTD18	NA	nonsynonymous SNV	KCTD18:NM_152387:exon7:c.G1169C:p.C390S	exonic	ENSG00000155729	NA	nonsynonymous SNV	ENSG00000155729:ENST00000359878:exon7:c.G1169C:p.C390S,ENSG00000155729:ENST00000409157:exon7:c.G1169C:p.C390S	NA	NA	2q33.1	NA	NA	NA	NA	rs3795969	0.35	0.35	0.331	0.325879	0.3688	0.4365	0.3905	0.2012	0.2904	0.37	0.46	0.34	0.19	0.3663	0.46	1	T	0.0	B	0.0	B	0.007	N	1.000	P	-0.895	N	1.69	T	-0.907	T	0.000	T	0.017	-0.994	0.269	3.09	0.282	2.289	6.067	-0.994369	NA	1	0.395	0.222878	NA	0.362	NA	8.2032334
832	6	56463410	56463410	T	C	exonic	DST	NA	nonsynonymous SNV	DST:NM_015548:exon27:c.A3923G:p.Q1308R,DST:NM_183380:exon37:c.A4901G:p.Q1634R,DST:NM_001144770:exon38:c.A5021G:p.Q1674R,DST:NM_001144769:exon40:c.A5435G:p.Q1812R	exonic	ENSG00000151914	NA	nonsynonymous SNV	ENSG00000151914:ENST00000244364:exon27:c.A3923G:p.Q1308R,ENSG00000151914:ENST00000446842:exon33:c.A10187G:p.Q3396R,ENSG00000151914:ENST00000370788:exon37:c.A4901G:p.Q1634R,ENSG00000151914:ENST00000421834:exon37:c.A4901G:p.Q1634R,ENSG00000151914:ENST00000312431:exon42:c.A11159G:p.Q3720R,ENSG00000151914:ENST00000361203:exon42:c.A11159G:p.Q3720R,ENSG00000151914:ENST00000370769:exon43:c.A11165G:p.Q3722R,ENSG00000151914:ENST00000370754:exon46:c.A11699G:p.Q3900R	NA	NA	6p12.1	NA	NA	NA	NA	rs4712138	0.34	0.34	0.338	0.328275	0.3837	0.254	0.3804	0.351	0.2802	0.37	0.25	0.4	0.37	0.3562	0.42	0.5	T	0.003	B	0.009	B	0.967	N	1.000	P	1.95	M	0.73	T	-1.104	T	0.031	T	0.054	1.436	10.74	-11.8	-3.140	-0.337	6.580	1.435997	1.435997	0.17	0.390629	0.359848	NA	0.391	NA	8.2028044
832	1	43212926	43212926	G	A	exonic	LEPRE1	NA	nonsynonymous SNV	LEPRE1:NM_001146289:exon14:c.C2072T:p.A691V,LEPRE1:NM_001243246:exon14:c.C2072T:p.A691V	exonic	ENSG00000117385	NA	nonsynonymous SNV	ENSG00000117385:ENST00000236040:exon14:c.C2072T:p.A691V,ENSG00000117385:ENST00000397054:exon14:c.C2072T:p.A691V	NA	NA	1p34.2	NA	Name=SMC3_(ab9263),CTCF,Rad21	Name=52	NA	rs67014447	0.05	0.05	0.062	0.061901	0.0398	0.001	0.0389	0.1384	0.0603	0.04	NA	0.05	0.12	0.0473	0.13	0.41	T	.	.	.	.	.	.	1.000	N	.	.	1.28	T	-1.031	T	0.001	T	0.047	-1.803	0.009	.	0.000	-0.234	.	-1.803442	NA	0	0.043953	0.132547	NA	0.087	NA	8.2022804
832	22	45198009	45198009	A	G	exonic	ARHGAP8,PRR5-ARHGAP8	NA	synonymous SNV	ARHGAP8:NM_001017526:exon3:c.A132G:p.P44P,ARHGAP8:NM_001198726:exon3:c.A132G:p.P44P,ARHGAP8:NM_181335:exon3:c.A132G:p.P44P,PRR5-ARHGAP8:NM_181334:exon6:c.A498G:p.P166P	exonic	ENSG00000241484,ENSG00000248405	NA	synonymous SNV	ENSG00000241484:ENST00000336963:exon3:c.A132G:p.P44P,ENSG00000241484:ENST00000356099:exon3:c.A132G:p.P44P,ENSG00000241484:ENST00000389774:exon3:c.A132G:p.P44P,ENSG00000241484:ENST00000447333:exon3:c.A132G:p.P44P,ENSG00000241484:ENST00000396119:exon4:c.A132G:p.P44P,ENSG00000241484:ENST00000412433:exon5:c.A132G:p.P44P,ENSG00000248405:ENST00000361473:exon6:c.A525G:p.P175P,ENSG00000241484:ENST00000389773:exon6:c.A498G:p.P166P,ENSG00000248405:ENST00000352766:exon9:c.A894G:p.P298P,ENSG00000241484:ENST00000517296:exon9:c.A894G:p.P298P	Score=376;Name=lod=45	NA	22q13.31	NA	NA	NA	NA	rs2239813	0.6	0.6	0.58	0.638778	0.4781	0.5605	0.6729	0.7935	0.6513	0.47	0.61	0.61	0.77	0.5477	0.77	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.988	T	0.000	T	.	-0.308	2.532	-2.83	-0.574	-2.827	0.996	-0.3082	NA	NA	0.439767	0.750113	NA	0.514	NA	8.2010996
832	14	70925501	70925501	G	C	exonic	ADAM21	NA	nonsynonymous SNV	ADAM21:NM_003813:exon2:c.G1285C:p.E429Q	exonic	ENSG00000139985	NA	nonsynonymous SNV	ENSG00000139985:ENST00000267499:exon1:c.G1285C:p.E429Q,ENSG00000139985:ENST00000603540:exon2:c.G1285C:p.E429Q	NA	NA	14q24.2	Score=832;Name=V$FOXO1_02	NA	NA	NA	rs72735760	0.02	0.02	0.023	0.0175719	0.0497	0.005	0.0202	0.0061	0.0112	0.05	0.0017	0.02	0.02	0.0346	0.05	0.54	T	0.051	B	0.06	B	0.226	N	1.000	N	0.565	N	5.28	T	-0.892	T	0.001	T	0.064	0.115	4.62	1.38	0.610	0.025	7.149	0.115205	NA	0.37	0.04814	0.012937	NA	0.029	NA	8.2008934
832	19	6468331	6468331	T	C	exonic	DENND1C	NA	nonsynonymous SNV	DENND1C:NM_024898:exon22:c.A1705G:p.M569V	exonic	ENSG00000205744	NA	nonsynonymous SNV	ENSG00000205744:ENST00000543576:exon20:c.A1573G:p.M525V,ENSG00000205744:ENST00000381480:exon22:c.A1705G:p.M569V	NA	NA	19p13.3	NA	NA	NA	NA	rs62107586	0.26	0.26	0.238	0.229034	0.3877	0.003	0.245	0.3245	0.1585	0.37	0.0035	0.27	0.36	0.3184	0.43	1	T	0.0	B	0.0	B	0.521	N	1.000	P	-0.975	N	3.25	T	-0.918	T	0.000	T	0.024	-1.566	0.015	-5.17	-0.799	-1.413	6.100	-1.565636	NA	1	0.429219	0.325724	NA	0.297	NA	8.1980144
832	15	86286787	86286787	C	T	exonic	AKAP13	NA	nonsynonymous SNV	AKAP13:NM_001270546:exon28:c.C3986T:p.P1329L,AKAP13:NM_006738:exon36:c.C8135T:p.P2712L,AKAP13:NM_007200:exon36:c.C8123T:p.P2708L	exonic	ENSG00000170776	NA	nonsynonymous SNV	ENSG00000170776:ENST00000394510:exon23:c.C2858T:p.P953L,ENSG00000170776:ENST00000361243:exon36:c.C8135T:p.P2712L,ENSG00000170776:ENST00000394518:exon36:c.C8123T:p.P2708L	NA	NA	15q25.3	NA	NA	NA	NA	rs61734378	0.06	0.06	0.04	0.0555112	0.0398	0.0357	0.1844	0.0514	0.0061	0.03	0.03	0.13	0.07	0.054	0.13	0.13	T	0.023	B	0.016	B	.	.	1.000	N	1.67	L	2.87	T	-1.028	T	0.001	T	0.109	0.774	8.086	1.64	0.059	1.410	3.683	0.773548	NA	0	0.041521	0.040645	NA	0.072	NA	8.1980124
832	4	100048414	100048414	T	C	exonic	ADH4	NA	nonsynonymous SNV	ADH4:NM_000670:exon7:c.A925G:p.I309V	exonic	ENSG00000198099	NA	nonsynonymous SNV	ENSG00000198099:ENST00000265512:exon7:c.A925G:p.I309V,ENSG00000198099:ENST00000423445:exon7:c.A982G:p.I328V,ENSG00000198099:ENST00000505590:exon8:c.A982G:p.I328V,ENSG00000198099:ENST00000508393:exon8:c.A982G:p.I328V	NA	NA	4q23	NA	NA	NA	NA	rs1126671	0.82	0.82	0.825	0.847045	0.6968	0.999	0.7709	0.8608	0.8804	0.7	1	0.76	0.84	0.756	1	0.04	D	0.0	B	0.0	B	0.276	N	1.000	P	0.665	N	3.34	T	-1.006	T	0.000	T	0.014	-1.223	0.061	-7.29	-2.687	-0.757	3.768	-1.223333	NA	0.46	0.683721	0.822969	NA	0.732	NA	8.1968124
833	2	160086654	160086654	A	G	exonic	TANC1	NA	nonsynonymous SNV	TANC1:NM_033394:exon27:c.A4717G:p.T1573A	exonic	ENSG00000115183	NA	nonsynonymous SNV	ENSG00000115183:ENST00000454300:exon25:c.A4399G:p.T1467A,ENSG00000115183:ENST00000263635:exon27:c.A4717G:p.T1573A	NA	NA	2q24.2	NA	NA	NA	NA	rs55738533	0.41	0.41	0.45	0.509784	0.3728	0.6181	0.6095	0.4607	0.5348	0.29	0.53	0.49	0.39	0.4352	0.53	.	.	0.0	B	0.0	B	0.930	N	1.000	P	-1.1	N	-0.31	T	-0.968	T	0.000	T	0.013	-2.545	0.003	-3.12	-1.161	0.704	6.099	-2.5447	NA	0.87	0.330637	0.428314	NA	0.014	NA	8.1946964
833	8	141525327	141525327	A	G	exonic	CHRAC1	NA	nonsynonymous SNV	CHRAC1:NM_017444:exon3:c.A377G:p.H126R	exonic	ENSG00000104472	NA	nonsynonymous SNV	ENSG00000104472:ENST00000220913:exon3:c.A377G:p.H126R	NA	NA	8q24.3	NA	NA	NA	NA	rs2231524	0.04	0.04	0.042	0.0347444	0.0477	0.0397	0.0562	0.0151	0.0276	0.05	0.05	0.04	0.01	0.041	0.05	0.75	T	0.001	B	0.003	B	0.556	N	1.000	N	0	N	1.61	T	-1.030	T	0.006	T	0.136	0.364	5.978	-1.31	-0.407	1.145	2.748	0.364473	NA	1	0.050233	0.019519	NA	0.043	NA	8.1944004
833	9	90588970	90588970	C	A	exonic	CDK20	NA	nonsynonymous SNV	CDK20:NM_178432:exon2:c.G95T:p.C32F	exonic	ENSG00000156345	NA	nonsynonymous SNV	ENSG00000156345:ENST00000336654:exon2:c.G95T:p.C32F	NA	NA	9q22.1	NA	NA	Name=7	NA	rs28364935	0.08	0.08	0.066	0.0740815	0.0507	NA	0.0447	0.2141	0.0061	0.06	NA	0.06	0.21	0.0462	0.21	.	.	0.0	B	0.0	B	.	.	1.000	P	.	.	-0.23	T	-1.084	T	0.000	T	0.025	-0.648	1.147	1.56	0.099	0.096	3.487	-0.647886	NA	0.07	0.042442	0.184521	NA	0.072	NA	8.1939914
833	3	124114068	124114068	G	A	exonic	KALRN	NA	synonymous SNV	KALRN:NM_001024660:exon12:c.G2043A:p.K681K,KALRN:NM_003947:exon12:c.G2043A:p.K681K	exonic	ENSG00000160145	NA	synonymous SNV	ENSG00000160145:ENST00000439170:exon4:c.G471A:p.K157K,ENSG00000160145:ENST00000240874:exon12:c.G2043A:p.K681K,ENSG00000160145:ENST00000360013:exon12:c.G2043A:p.K681K,ENSG00000160145:ENST00000460856:exon12:c.G2043A:p.K681K	Score=584;Name=lod=315	NA	3q21.2	NA	NA	NA	NA	rs9841322	0.09	0.09	0.075	0.0832668	0.1809	0.0208	0.1254	0.0197	0.1033	0.18	0.01	0.11	0.03	0.1278	0.18	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.082	T	0.000	T	.	0.951	8.877	2.59	0.406	0.858	8.728	0.950664	NA	NA	0.164186	0.039265	NA	0.058	NA	8.1937806
833	3	186370350	186370350	A	G	exonic	FETUB	NA	nonsynonymous SNV	FETUB:NM_014375:exon7:c.A1079G:p.K360R	exonic	ENSG00000090512	NA	nonsynonymous SNV	ENSG00000090512:ENST00000382134:exon5:c.A884G:p.K295R,ENSG00000090512:ENST00000539949:exon5:c.A635G:p.K212R,ENSG00000090512:ENST00000382136:exon6:c.A968G:p.K323R,ENSG00000090512:ENST00000265029:exon7:c.A1079G:p.K360R,ENSG00000090512:ENST00000450521:exon8:c.A1079G:p.K360R	NA	NA	3q27.3	NA	NA	NA	NA	rs7999	0.07	0.07	0.059	0.0732827	0.0427	0.0903	0.0576	0.1165	0.0399	0.04	0.07	0.07	0.14	0.0509	0.14	0.45	T	0.004	B	0.007	B	0.079	N	1.000	P	1.245	L	0.81	T	-1.100	T	0.001	T	0.018	0.091	4.489	-2.58	-0.862	-0.269	6.299	0.0906	NA	0.52	0.046163	0.096686	NA	0.043	NA	8.1935704
833	9	90501609	90501609	C	T	exonic	SPATA31E1	NA	nonsynonymous SNV	SPATA31E1:NM_178828:exon4:c.C2207T:p.A736V	exonic	ENSG00000177992	NA	nonsynonymous SNV	ENSG00000177992:ENST00000325643:exon4:c.C2207T:p.A736V	NA	NA	9q22.1	NA	NA	NA	NA	rs34791830	0.08	0.08	0.078	0.077476	0.0497	NA	0.036	0.2322	0.0061	0.05	NA	0.04	0.23	0.0466	0.23	0.17	T	0.939	P	0.479	P	0.023	N	1.000	P	0.55	N	3.26	T	-1.002	T	0.000	T	0.007	1.509	10.99	0.098	0.022	-0.604	4.701	1.508556	1.508556	0.86	0.043721	0.182705	NA	0.094	NA	8.1933124
833	13	103515085	103515085	G	C	exonic	BIVM-ERCC5,ERCC5	NA	nonsynonymous SNV	ERCC5:NM_000123:exon8:c.G1586C:p.C529S,BIVM-ERCC5:NM_001204425:exon16:c.G2948C:p.C983S	exonic	ENSG00000134899,ENSG00000270181	NA	nonsynonymous SNV	ENSG00000134899:ENST00000355739:exon8:c.G1586C:p.C529S	NA	NA	13q33.1	NA	NA	NA	NA	rs2227869	0.05	0.05	0.041	0.0423323	0.0537	0.0437	0.0231	0.0393	0.047	0.06	0.05	0.03	0.04	0.0441	0.06	0.75	T	0.0	B	0.0	B	0.255	N	1.000	N	-1.39	N	3.83	T	-0.935	T	0.000	T	0.008	-0.819	0.627	1.94	0.048	0.396	1.725	-0.818683	NA	0.91	0.04314	0.04335	NA	0.014	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116991.3;CLNDSDB=.;CLNDSDBID=.	8.1923934
833	1	215987222	215987222	T	C	exonic	USH2A	NA	nonsynonymous SNV	USH2A:NM_206933:exon49:c.A9595G:p.N3199D	exonic	ENSG00000042781	NA	nonsynonymous SNV	ENSG00000042781:ENST00000307340:exon49:c.A9595G:p.N3199D,ENSG00000042781:ENST00000366943:exon49:c.A9595G:p.N3199D	NA	NA	1q41	NA	NA	NA	NA	rs4129843	0.07	0.07	0.066	0.0870607	0.0467	0.1577	0.0548	0.0847	0.0818	0.04	0.14	0.04	0.07	0.0553	0.14	0.89	T	0.0	B	0.001	B	0.045	N	1.000	P	-1.04	N	2.67	T	-0.929	T	0.000	T	0.016	-0.6	1.318	-0.526	-0.067	0.185	12.061	-0.600327	NA	0.97	0.039767	0.078075	NA	0.058	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000041957.1|RCV000126256.1;CLNDSDB=.|.;CLNDSDBID=.|.	8.1915664
833	3	183778010	183778010	G	C	exonic	HTR3C	NA	nonsynonymous SNV	HTR3C:NM_130770:exon9:c.G1214C:p.G405A	exonic	ENSG00000178084	NA	nonsynonymous SNV	ENSG00000178084:ENST00000318351:exon9:c.G1214C:p.G405A	NA	NA	3q27.1	NA	NA	NA	NA	rs6807362	0.59	0.59	0.6	0.55631	0.5676	0.746	0.6715	0.4418	0.4223	0.56	0.75	0.64	0.43	0.5444	0.75	0.53	T	0.647	P	0.156	B	0.692	N	1.000	P	1.445	L	-1.57	D	-0.991	T	0.000	T	0.046	-0.492	1.74	-6.84	-0.832	-0.507	6.417	-0.491959	NA	0.68	0.531163	0.471857	ID=COSM149532;OCCURENCE=1(stomach)	0.507	NA	8.1901704
833	19	37488472	37488472	C	G	exonic	ZNF568	NA	nonsynonymous SNV	ZNF568:NM_001204839:exon9:c.C1687G:p.P563A,ZNF568:NM_001204838:exon10:c.C1879G:p.P627A	exonic	ENSG00000198453	NA	nonsynonymous SNV	ENSG00000198453:ENST00000455427:exon9:c.C1687G:p.P563A	NA	NA	19q13.12	NA	NA	NA	NA	rs1644698	0.47	0.47	0.45	0.497005	0.5119	0.251	0.5346	0.6006	0.5685	0.52	0.26	0.52	0.61	0.6316	0.61	.	.	0.0	B	0.0	B	.	.	1.000	P	-1.505	N	2.44	T	-0.947	T	0.000	T	0.039	-1.856	0.009	-3.9	-0.757	-4.299	1.414	-1.855537	NA	1	NA	NA	NA	0.493	NA	8.1898334
833	5	141336264	141336264	G	T	exonic	PCDH12	NA	nonsynonymous SNV	PCDH12:NM_016580:exon1:c.C1153A:p.H385N	exonic	ENSG00000113555	NA	nonsynonymous SNV	ENSG00000113555:ENST00000231484:exon1:c.C1153A:p.H385N	Score=469;Name=lod=107	NA	5q31.3	NA	NA	NA	NA	rs164075	0.73	0.73	0.747	NA	NA	NA	NA	NA	NA	0.53	0.86	0.67	0.93	0.6281	0.93	0.63	T	0.0	B	0.0	B	0.024	N	1.000	P	-1.1	N	0.77	T	-1.006	T	0.000	T	0.016	-0.337	2.403	2.48	0.358	0.360	6.324	-0.337136	NA	0.64	0.516047	0.860872	NA	0.703	NA	8.1891864
833	7	91712698	91712698	A	G	exonic	AKAP9	NA	nonsynonymous SNV	AKAP9:NM_005751:exon33:c.A8375G:p.N2792S,AKAP9:NM_147185:exon33:c.A8351G:p.N2784S	exonic	ENSG00000127914	NA	nonsynonymous SNV	ENSG00000127914:ENST00000394534:exon7:c.A1913G:p.N638S,ENSG00000127914:ENST00000356239:exon33:c.A8375G:p.N2792S,ENSG00000127914:ENST00000358100:exon34:c.A8411G:p.N2804S,ENSG00000127914:ENST00000359028:exon34:c.A8411G:p.N2804S	NA	NA	7q21.2	NA	NA	NA	NA	rs6960867	0.3	0.3	0.284	0.295927	0.3837	0.1617	0.3458	0.2209	0.41	0.39	0.17	0.36	0.25	0.3593	0.4	0.48	T	0.023	B	0.007	B	0.934	N	1.000	P	1.935	M	0.89	T	-0.923	T	0.000	T	0.01	0.57	7.078	-2.13	-0.542	0.398	1.523	0.56965	NA	0.42	0.401279	0.267817	NA	0.312	NA	8.1890544
833	16	28944396	28944396	C	G	exonic	CD19	NA	nonsynonymous SNV	CD19:NM_001178098:exon3:c.C520G:p.L174V,CD19:NM_001770:exon3:c.C520G:p.L174V	exonic	ENSG00000177455	NA	nonsynonymous SNV	ENSG00000177455:ENST00000324662:exon3:c.C520G:p.L174V,ENSG00000177455:ENST00000538922:exon3:c.C520G:p.L174V,ENSG00000177455:ENST00000567541:exon3:c.C520G:p.L174V	NA	NA	16p11.2	NA	Name=Pol2	Name=5	NA	rs2904880	0.82	0.82	0.843	0.830272	0.7276	0.9018	0.5504	0.9909	0.8436	0.73	0.89	0.65	0.99	0.7293	0.99	0.15	T	0.0	B	0.0	B	0.664	N	1.000	P	0	N	1.35	T	-1.015	T	0.000	T	0.025	1.428	10.71	2.82	0.572	0.092	5.762	1.427882	1.427882	0.26	0.687558	0.929449	NA	0.891	NA	8.1888754
833	4	3006043	3006043	C	T	exonic	GRK4	NA	nonsynonymous SNV	GRK4:NM_001004056:exon4:c.C329T:p.A110V,GRK4:NM_001004057:exon5:c.C425T:p.A142V,GRK4:NM_182982:exon5:c.C425T:p.A142V	exonic	ENSG00000125388	NA	nonsynonymous SNV	ENSG00000125388:ENST00000345167:exon4:c.C329T:p.A110V,ENSG00000125388:ENST00000398051:exon4:c.C329T:p.A110V,ENSG00000125388:ENST00000398052:exon5:c.C425T:p.A142V,ENSG00000125388:ENST00000504933:exon5:c.C425T:p.A142V	NA	NA	4p16.3	NA	NA	Name=12	NA	rs1024323	0.39	0.39	0.398	0.373203	0.4016	0.1895	0.3833	0.6339	0.1738	0.41	0.18	0.38	0.63	0.3648	0.63	0.27	T	0.001	B	0.004	B	0.001	N	1.000	P	-1.15	N	4.65	T	-1.109	T	0.000	T	0.043	0.554	6.994	2.11	0.052	0.527	7.587	0.553558	NA	0.21	0.380814	0.59714	NA	0.333	NA	8.1861194
833	10	102048208	102048208	G	T	exonic	PKD2L1	NA	nonsynonymous SNV	PKD2L1:NM_001253837:exon16:c.C2222A:p.A741D,PKD2L1:NM_016112:exon16:c.C2363A:p.A788D	exonic	ENSG00000107593	NA	nonsynonymous SNV	ENSG00000107593:ENST00000338519:exon15:c.C2138A:p.A713D,ENSG00000107593:ENST00000353274:exon15:c.C2278A:p.P760T,ENSG00000107593:ENST00000318222:exon16:c.C2363A:p.A788D	NA	NA	10q24.31	NA	NA	NA	NA	rs12782963	0.07	0.07	0.065	0.0790735	0.0487	0.0615	0.0519	0.1195	0.093	0.05	0.07	0.06	0.1	0.0525	0.1	0.01	D	0.001	B	0.0	B	0.013	N	1.000	P	0.55	N	0.24	T	-1.020	T	0.002	T	0.16	0.443	6.405	-1.12	-0.184	-0.587	2.906	0.442893	NA	0	0.046163	0.093963	NA	0.051	NA	8.1859704
833	6	4716016	4716016	A	G	intergenic	ECI2,CDYL	dist=580185;dist=60664	NA	NA	exonic	ENSG00000153046	NA	nonsynonymous SNV	ENSG00000153046:ENST00000328908:exon2:c.A4G:p.T2A	NA	NA	6p25.1	Score=853;Name=V$FOXJ2_02	NA	Name=5	NA	rs3812179	0.26	0.26	0.225	0.235224	0.2247	0.2679	0.3256	0.3116	0.045	0.22	0.24	0.29	0.3	0.2126	0.3	1	T	0.0	B	0.0	B	.	.	1.000	P	.	.	0.9	T	-0.968	T	0.012	T	0.043	-2.025	0.006	2.87	0.362	0.791	2.312	-2.02473	NA	1	0.210233	0.28098	ID=COSM150036;OCCURENCE=1(stomach),1(lung)	0.297	NA	8.1858004
834	7	156742965	156742965	G	C	exonic	NOM1	NA	synonymous SNV	NOM1:NM_138400:exon1:c.G534C:p.A178A	exonic	ENSG00000146909	NA	synonymous SNV	ENSG00000146909:ENST00000275820:exon1:c.G534C:p.A178A	Score=503;Name=lod=147	NA	7q36.3	NA	Name=ZNF263,ELF1_(SC-631),GABP	Name=81	NA	rs61734937	0.22	0.22	0.224	0.219449	0.1511	0.2808	0.2421	0.264	0.1503	0.16	0.29	0.19	0.24	0.187	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.287939	2.287939	NA	0.143971	0.265121	NA	0.145	NA	8.1845956
834	19	56702323	56702323	C	T	exonic	ZSCAN5B	NA	nonsynonymous SNV	ZSCAN5B:NM_001080456:exon3:c.G622A:p.V208I	exonic	ENSG00000197213	NA	nonsynonymous SNV	ENSG00000197213:ENST00000358992:exon3:c.G622A:p.V208I,ENSG00000197213:ENST00000586855:exon4:c.G622A:p.V208I	NA	NA	19q13.43	NA	NA	NA	NA	rs4801296	0.46	0.46	0.451	0.483027	0.3767	0.4067	0.4294	0.739	0.363	0.38	0.39	0.41	0.72	0.4071	0.72	0.26	T	0.0	B	0.0	B	.	.	1.000	P	-0.29	N	3.4	T	-1.040	T	0.000	T	0.013	-0.595	1.338	-2.6	-2.131	-0.563	4.447	-0.594838	NA	0.33	0.366163	0.683159	NA	0.493	NA	8.1833704
834	1	22332008	22332008	T	C	exonic	CELA3A	NA	synonymous SNV	CELA3A:NM_005747:exon3:c.T198C:p.D66D	exonic	ENSG00000142789	NA	synonymous SNV	ENSG00000142789:ENST00000290122:exon3:c.T198C:p.D66D,ENSG00000142789:ENST00000374663:exon3:c.T198C:p.D66D	Score=358;Name=lod=38	NA	1p36.12	Score=781;Name=V$PAX2_01	Name=CTCFL_(SC-98982),CTCF	NA	NA	rs56968853	NA	NA	0.091	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4838	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.91502	NA	NA	NA	NA	NA	NA	NA	8.1828666
834	4	40103767	40103767	G	T	exonic	N4BP2	NA	nonsynonymous SNV	N4BP2:NM_018177:exon4:c.G302T:p.S101I	exonic	ENSG00000078177	NA	nonsynonymous SNV	ENSG00000078177:ENST00000515550:exon3:c.G62T:p.S21I,ENSG00000078177:ENST00000261435:exon4:c.G302T:p.S101I	NA	NA	4p14	NA	NA	NA	NA	rs17511668	0.13	0.13	0.085	0.113818	0.2217	0.0208	0.255	0.0106	0.138	0.23	0.02	0.27	0.01	0.2	0.27	0.01	D	0.465	P	0.165	B	0.805	N	1.000	P	0.55	N	2.16	T	-0.988	T	0.000	T	0.215	0.596	7.215	1.32	-0.065	-0.144	1.726	0.596153	NA	0.01	0.23	0.04857	NA	0.058	NA	8.1816334
834	12	57911160	57911160	G	A	exonic	DDIT3	NA	synonymous SNV	DDIT3:NM_001195056:exon2:c.C99T:p.F33F,DDIT3:NM_001195053:exon3:c.C99T:p.F33F,DDIT3:NM_001195054:exon3:c.C99T:p.F33F,DDIT3:NM_001195055:exon3:c.C99T:p.F33F,DDIT3:NM_001195057:exon3:c.C30T:p.F10F,DDIT3:NM_004083:exon3:c.C30T:p.F10F	exonic	ENSG00000175197	NA	synonymous SNV	ENSG00000175197:ENST00000552740:exon2:c.C99T:p.F33F,ENSG00000175197:ENST00000346473:exon3:c.C30T:p.F10F,ENSG00000175197:ENST00000547303:exon3:c.C30T:p.F10F,ENSG00000175197:ENST00000547526:exon3:c.C99T:p.F33F,ENSG00000175197:ENST00000551116:exon3:c.C99T:p.F33F	Score=643;Name=lod=545	NA	12q13.3	NA	Name=Pol2(phosphoS2),Pol2,Pol2(b)	Name=103	NA	rs697221	0.21	0.21	0.199	0.201478	0.175	0.245	0.1398	0.2421	0.1728	0.18	0.25	0.14	0.26	0.1669	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.951896	NA	NA	0.143372	0.221289	NA	0.203	NA	8.1813946
834	14	21360216	21360216	C	G	exonic	RNASE3	NA	nonsynonymous SNV	RNASE3:NM_002935:exon2:c.C371G:p.T124R	exonic	ENSG00000169397	NA	nonsynonymous SNV	ENSG00000169397:ENST00000304639:exon2:c.C371G:p.T124R	NA	NA	14q11.2	NA	NA	NA	NA	rs2073342	0.66	0.66	0.621	0.640575	0.7197	0.7361	0.8199	0.3722	0.6963	0.72	0.73	0.8	0.39	0.7148	0.8	1	T	0.0	B	0.001	B	0.190	N	1.000	P	-2.405	N	-0.52	T	-0.948	T	0.000	T	0.054	-2.646	0	-3.36	-1.709	-3.009	1.307	-2.645508	NA	1	0.717442	0.442211	NA	0.681	NA	8.1813914
834	19	15587185	15587185	C	T	exonic	PGLYRP2	NA	nonsynonymous SNV	PGLYRP2:NM_052890:exon2:c.G296A:p.R99Q	exonic	ENSG00000161031	NA	nonsynonymous SNV	ENSG00000161031:ENST00000292609:exon2:c.G296A:p.R99Q,ENSG00000161031:ENST00000340880:exon2:c.G296A:p.R99Q,ENSG00000161031:ENST00000594637:exon3:c.G296A:p.R99Q,ENSG00000161031:ENST00000601792:exon4:c.G296A:p.R99Q	NA	NA	19p13.12	NA	NA	NA	NA	rs733731	0.36	0.36	0.372	0.351238	0.4056	0.3631	0.3401	0.3457	0.2986	0.4	0.37	0.31	0.33	0.3614	0.4	0.71	T	0.03	B	0.005	B	0.898	N	1.000	P	0	N	3.6	T	-0.915	T	0.000	T	0.019	-0.203	3.013	-5.85	-1.182	-0.461	14.063	-0.203499	NA	0.65	0.385581	0.344076	ID=COSM438799,COSM438798;OCCURENCE=1(breast),1(large_intestine)	0.464	NA	8.1807524
834	19	17113147	17113147	A	G	exonic	CPAMD8	NA	synonymous SNV	CPAMD8:NM_015692:exon9:c.T828C:p.F276F	exonic	ENSG00000160111	NA	synonymous SNV	ENSG00000160111:ENST00000291440:exon9:c.T828C:p.F276F,ENSG00000160111:ENST00000388925:exon9:c.T687C:p.F229F,ENSG00000160111:ENST00000443236:exon9:c.T828C:p.F276F	Score=472;Name=lod=110	NA	19p13.11	NA	NA	NA	NA	rs3745345	0.18	0.18	0.188	0.185503	0.1471	0.121	0.0994	0.379	0.091	0.14	0.11	0.09	0.39	0.199	0.39	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.937	T	0.000	T	.	-0.565	1.453	1.39	-0.386	2.475	8.320	-0.564591	NA	NA	0.141473	0.316426	NA	0.181	NA	8.1790936
834	4	38798648	38798648	C	A	exonic	TLR1	NA	nonsynonymous SNV	TLR1:NM_003263:exon4:c.G1805T:p.S602I	exonic	ENSG00000174125	NA	nonsynonymous SNV	ENSG00000174125:ENST00000502213:exon3:c.G1805T:p.S602I,ENSG00000174125:ENST00000308979:exon4:c.G1805T:p.S602I	NA	NA	4p14	NA	NA	NA	NA	rs5743618	0.67	0.67	0.647	0.800519	0.327	0.994	0.7161	0.9644	0.9264	0.25	0.99	0.65	0.95	0.5389	0.99	1	T	0.0	B	0.0	B	0.224	N	1.000	P	-2.215	N	4.65	T	-0.981	T	0.000	T	0.052	-1.58	0.014	2.76	0.431	0.626	8.482	-1.580406	NA	1	0.288372	0.850136	NA	0.674	CLINSIG=other;CLNDBN=Leprosy\x2c_protection_against;CLNREVSTAT=single;CLNACC=RCV000008865.3;CLNDSDB=MedGen;CLNDSDBID=C2750734	8.1790614
834	19	44352666	44352666	G	A	exonic	ZNF283	NA	nonsynonymous SNV	ZNF283:NM_181845:exon7:c.G1913A:p.C638Y	exonic	ENSG00000167637	NA	nonsynonymous SNV	ENSG00000167637:ENST00000588797:exon6:c.G1496A:p.C499Y,ENSG00000167637:ENST00000324461:exon7:c.G1913A:p.C638Y	NA	NA	19q13.31	NA	NA	NA	NA	rs1061769	0.27	0.27	0.329	0.38738	0.3976	0.2401	0.2478	0.4493	0.544	0.31	0.19	0.27	0.31	0.4017	0.39	1	T	0.0	B	0.0	B	.	.	1.000	P	0.47	N	3.24	T	-0.931	T	0.000	T	0.012	-2.175	0.005	-3.01	-1.487	0.923	12.052	-2.174593	NA	1	0.355471	0.38864	NA	NA	NA	8.1785624
834	12	998365	998365	G	T	exonic	WNK1	NA	nonsynonymous SNV	WNK1:NM_014823:exon19:c.G4683T:p.M1561I,WNK1:NM_001184985:exon21:c.G6204T:p.M2068I,WNK1:NM_018979:exon21:c.G5424T:p.M1808I,WNK1:NM_213655:exon21:c.G6180T:p.M2060I	exonic	ENSG00000060237	NA	nonsynonymous SNV	ENSG00000060237:ENST00000340908:exon18:c.G4203T:p.M1401I,ENSG00000060237:ENST00000535572:exon19:c.G4683T:p.M1561I,ENSG00000060237:ENST00000315939:exon21:c.G5424T:p.M1808I,ENSG00000060237:ENST00000537687:exon21:c.G6204T:p.M2068I,ENSG00000060237:ENST00000530271:exon23:c.G6918T:p.M2306I	Score=608;Name=lod=396	NA	12p13.33	NA	NA	NA	NA	rs12828016	0.39	0.39	0.422	0.417532	0.3877	0.2808	0.3213	0.5522	0.4755	0.38	0.29	0.35	0.53	0.3766	0.53	0.44	T	0.0	B	0.0	B	0.005	N	0.000	P	0	N	1.71	T	-0.925	T	0.000	T	0.035	1.272	10.15	2.16	0.183	-0.071	2.550	1.272499	1.272499	0.19	0.391047	0.510213	NA	0.5	NA	8.1779864
834	3	191100561	191100561	C	A	exonic	CCDC50	NA	synonymous SNV	CCDC50:NM_174908:exon9:c.C741A:p.S247S,CCDC50:NM_178335:exon10:c.C1269A:p.S423S	exonic	ENSG00000152492	NA	synonymous SNV	ENSG00000152492:ENST00000392455:exon9:c.C741A:p.S247S,ENSG00000152492:ENST00000392456:exon10:c.C1269A:p.S423S	Score=355;Name=lod=37	NA	3q28	NA	Name=PU.1	Name=5	NA	rs364519	0.63	0.63	0.642	0.644968	0.495	0.6865	0.5778	0.8548	0.5204	0.5	0.65	0.57	0.84	0.5337	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.931275	NA	NA	0.460814	0.790059	NA	0.522	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000041441.1;CLNDSDB=.;CLNDSDBID=.	8.1771526
834	2	202245423	202245423	A	T	exonic	TRAK2	NA	nonsynonymous SNV	TRAK2:NM_015049:exon16:c.T2588A:p.I863N	exonic	ENSG00000115993	NA	nonsynonymous SNV	ENSG00000115993:ENST00000332624:exon16:c.T2588A:p.I863N	NA	NA	2q33.1	NA	NA	NA	NA	rs34594680	0.05	0.05	0.052	0.052516	0.0527	0.001	0.0562	0.1233	0.0072	0.06	0.0017	0.05	0.11	0.0472	0.11	0.54	T	0.0	B	0.0	B	0.345	N	1.000	N	0	N	3.24	T	-1.037	T	0.001	T	0.021	-0.5	1.705	-2.31	-0.627	0.062	4.781	-0.500469	NA	0.04	0.057442	0.102133	NA	0.051	NA	8.1759914
834	9	131702891	131702891	A	G	exonic	PHYHD1	NA	nonsynonymous SNV	PHYHD1:NM_174933:exon10:c.A578G:p.E193G	exonic	ENSG00000175287	NA	nonsynonymous SNV	ENSG00000175287:ENST00000308941:exon10:c.A578G:p.E193G	Score=346;Name=lod=34	NA	9q34.11	Score=742;Name=V$TCF11MAFG_01	NA	NA	NA	rs2273866	0.36	0.36	0.348	0.351438	0.4095	0.2381	0.4251	0.3555	0.3507	0.41	0.23	0.41	0.4	0.3706	0.43	0.4	T	0.001	B	0.003	B	0.063	N	0.000	P	.	.	.	.	-0.963	T	0.000	T	0.408	2.474	14.23	-1.45	-0.043	-0.020	8.232	2.473911	2.473911	0	0.377558	0.353609	ID=COSM150725;OCCURENCE=1(stomach)	0.464	NA	8.1756754
835	16	24834233	24834233	C	T	exonic	TNRC6A	NA	synonymous SNV	TNRC6A:NM_014494:exon24:c.C5412T:p.H1804H	exonic	ENSG00000090905	NA	synonymous SNV	ENSG00000090905:ENST00000569098:exon4:c.C354T:p.H118H,ENSG00000090905:ENST00000432286:exon7:c.C846T:p.H282H,ENSG00000090905:ENST00000450465:exon17:c.C2244T:p.H748H,ENSG00000090905:ENST00000315183:exon23:c.C5265T:p.H1755H,ENSG00000090905:ENST00000395799:exon24:c.C5412T:p.H1804H	Score=697;Name=lod=909	NA	16p12.1	NA	NA	NA	Score=100;Name=890221_0_+_100	rs2303085	0.23	0.23	0.207	0.220847	0.166	0.4038	0.2637	0.1626	0.137	0.18	0.4	0.22	0.13	0.1896	0.4	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.930	T	0.000	T	.	1.074	9.384	1.87	0.338	0.189	7.386	1.073739	NA	NA	0.136628	0.157487	ID=COSM148053;OCCURENCE=1(stomach)	0.167	NA	8.1744386
835	15	48797307	48797307	A	G	exonic	FBN1	NA	synonymous SNV	FBN1:NM_000138:exon16:c.T1875C:p.N625N	exonic	ENSG00000166147	NA	synonymous SNV	ENSG00000166147:ENST00000316623:exon16:c.T1875C:p.N625N	Score=505;Name=lod=150	NA	15q21.1	Score=820;Name=V$OCT1_04	NA	NA	NA	rs25458	0.29	0.29	0.296	0.296925	0.1501	0.3522	0.2046	0.5106	0.1677	0.14	0.38	0.17	0.51	0.2006	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.026375	NA	NA	0.141993	0.444697	NA	0.254	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000035131.1|RCV000124994.1;CLNDSDB=.|.;CLNDSDBID=.|.	8.1739736
835	13	100888122	100888122	A	G	exonic	PCCA	NA	synonymous SNV	PCCA:NM_001127692:exon7:c.A549G:p.A183A,PCCA:NM_000282:exon8:c.A627G:p.A209A,PCCA:NM_001178004:exon8:c.A627G:p.A209A	exonic	ENSG00000175198	NA	synonymous SNV	ENSG00000175198:ENST00000376286:exon7:c.A549G:p.A183A,ENSG00000175198:ENST00000376279:exon8:c.A627G:p.A209A,ENSG00000175198:ENST00000376285:exon8:c.A627G:p.A209A	Score=788;Name=lod=2134	NA	13q32.3	NA	Name=PU.1,CEBPB,p300,EBF,c-Myc	Name=58	NA	rs538229	0.11	0.11	0.106	0.103035	0.174	0.0159	0.1455	0.0885	0.1094	0.17	0.01	0.15	0.11	0.1475	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.716658	NA	NA	0.17186	0.111893	NA	0.159	NA	8.1733066
835	14	90745422	90745422	T	C	exonic	NRDE2	NA	nonsynonymous SNV	NRDE2:NM_017970:exon13:c.A3353G:p.N1118S	exonic	ENSG00000119720	NA	nonsynonymous SNV	ENSG00000119720:ENST00000357904:exon11:c.A2660G:p.N887S,ENSG00000119720:ENST00000354366:exon13:c.A3353G:p.N1118S	NA	NA	14q32.11	NA	NA	NA	NA	rs3737035	0.35	0.35	0.33	0.324281	0.3946	0.5099	0.3012	0.0825	0.4039	0.41	0.51	0.33	0.09	0.3693	0.51	0.81	T	0.004	B	0.004	B	0.009	N	1.000	P	-0.125	N	1.84	T	-0.964	T	0.000	T	0.009	-1.577	0.014	-3.03	-0.493	1.427	6.781	-1.577019	NA	0.68	0.39907	0.144349	NA	0.304	NA	8.1703634
835	6	136599836	136599836	G	A	exonic	BCLAF1	NA	synonymous SNV	BCLAF1:NM_001077440:exon4:c.C177T:p.Y59Y,BCLAF1:NM_001077441:exon4:c.C183T:p.Y61Y,BCLAF1:NM_014739:exon4:c.C183T:p.Y61Y	exonic	ENSG00000029363	NA	synonymous SNV	ENSG00000029363:ENST00000392348:exon2:c.C177T:p.Y59Y,ENSG00000029363:ENST00000353331:exon4:c.C177T:p.Y59Y,ENSG00000029363:ENST00000527536:exon4:c.C183T:p.Y61Y,ENSG00000029363:ENST00000527613:exon4:c.C183T:p.Y61Y,ENSG00000029363:ENST00000527759:exon4:c.C177T:p.Y59Y,ENSG00000029363:ENST00000529826:exon4:c.C183T:p.Y61Y,ENSG00000029363:ENST00000530429:exon4:c.C177T:p.Y59Y,ENSG00000029363:ENST00000530767:exon4:c.C183T:p.Y61Y,ENSG00000029363:ENST00000531224:exon4:c.C183T:p.Y61Y,ENSG00000029363:ENST00000532384:exon4:c.C183T:p.Y61Y,ENSG00000029363:ENST00000534269:exon4:c.C177T:p.Y59Y	Score=741;Name=lod=1365	NA	6q23.3	Score=705;Name=V$HOX13_01	NA	Name=2	NA	rs9942518	0.49	0.49	0.43	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.48	0.4978	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.459641	NA	NA	NA	NA	NA	0.449	NA	8.1688666
835	18	5956238	5956238	C	T	exonic	L3MBTL4	NA	nonsynonymous SNV	L3MBTL4:NM_173464:exon20:c.G1853A:p.G618D	exonic	ENSG00000154655	NA	nonsynonymous SNV	ENSG00000154655:ENST00000535782:exon12:c.G1265A:p.G422D,ENSG00000154655:ENST00000317931:exon19:c.G1826A:p.G609D,ENSG00000154655:ENST00000284898:exon20:c.G1853A:p.G618D,ENSG00000154655:ENST00000400105:exon20:c.G1853A:p.G618D	NA	NA	18p11.31	NA	NA	Name=12	NA	rs3737353	0.38	0.38	0.359	0.384784	0.3976	0.4742	0.2723	0.2927	0.4836	0.41	0.47	0.28	0.3	0.3812	0.48	0.17	T	0.053	B	0.043	B	0.097	N	1.000	P	0.69	N	2.36	T	-0.922	T	0.000	T	0.074	1.433	10.73	2.78	0.310	0.125	7.854	1.432921	1.432921	NA	0.385973	0.291318	ID=COSM1389481;OCCURENCE=1(large_intestine)	0.37	NA	8.1685604
835	6	136599842	136599842	G	A	exonic	BCLAF1	NA	synonymous SNV	BCLAF1:NM_001077440:exon4:c.C171T:p.R57R,BCLAF1:NM_001077441:exon4:c.C177T:p.R59R,BCLAF1:NM_014739:exon4:c.C177T:p.R59R	exonic	ENSG00000029363	NA	synonymous SNV	ENSG00000029363:ENST00000392348:exon2:c.C171T:p.R57R,ENSG00000029363:ENST00000353331:exon4:c.C171T:p.R57R,ENSG00000029363:ENST00000527536:exon4:c.C177T:p.R59R,ENSG00000029363:ENST00000527613:exon4:c.C177T:p.R59R,ENSG00000029363:ENST00000527759:exon4:c.C171T:p.R57R,ENSG00000029363:ENST00000529826:exon4:c.C177T:p.R59R,ENSG00000029363:ENST00000530429:exon4:c.C171T:p.R57R,ENSG00000029363:ENST00000530767:exon4:c.C177T:p.R59R,ENSG00000029363:ENST00000531224:exon4:c.C177T:p.R59R,ENSG00000029363:ENST00000532384:exon4:c.C177T:p.R59R,ENSG00000029363:ENST00000534269:exon4:c.C171T:p.R57R	Score=741;Name=lod=1365	NA	6q23.3	Score=705;Name=V$HOX13_01	NA	Name=2	NA	rs9942519	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.49	0.4999	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.300876	NA	NA	NA	NA	NA	0.5	NA	8.1667666
835	1	144882581	144882581	A	G	exonic	PDE4DIP	NA	synonymous SNV	PDE4DIP:NM_001198834:exon24:c.T3438C:p.I1146I,PDE4DIP:NM_014644:exon24:c.T3438C:p.I1146I	exonic	ENSG00000178104	NA	synonymous SNV	ENSG00000178104:ENST00000369354:exon24:c.T3438C:p.I1146I,ENSG00000178104:ENST00000369356:exon24:c.T3438C:p.I1146I,ENSG00000178104:ENST00000369359:exon27:c.T3849C:p.I1283I,ENSG00000178104:ENST00000530740:exon27:c.T3849C:p.I1283I	NA	NA	1q21.1	NA	NA	NA	NA	rs1699836	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	.	.	.	.	.	.	.	.	1.000	N	.	.	.	.	.	.	.	.	.	0.775	8.095	-11.6	-2.229	-4.503	7.706	0.77547	NA	NA	NA	NA	NA	0.5	NA	8.1666666
835	1	144917546	144917546	A	G	exonic	PDE4DIP	NA	synonymous SNV	PDE4DIP:NM_001002811:exon8:c.T2047C:p.L683L,PDE4DIP:NM_001002812:exon12:c.T1558C:p.L520L,PDE4DIP:NM_001198834:exon12:c.T1558C:p.L520L,PDE4DIP:NM_014644:exon12:c.T1558C:p.L520L,PDE4DIP:NM_001198832:exon15:c.T1756C:p.L586L	exonic	ENSG00000178104	NA	synonymous SNV	ENSG00000178104:ENST00000313431:exon8:c.T2047C:p.L683L,ENSG00000178104:ENST00000479408:exon8:c.T919C:p.L307L,ENSG00000178104:ENST00000529945:exon8:c.T2047C:p.L683L,ENSG00000178104:ENST00000369349:exon12:c.T1558C:p.L520L,ENSG00000178104:ENST00000369351:exon12:c.T1558C:p.L520L,ENSG00000178104:ENST00000369354:exon12:c.T1558C:p.L520L,ENSG00000178104:ENST00000369356:exon12:c.T1558C:p.L520L,ENSG00000178104:ENST00000313382:exon15:c.T1756C:p.L586L,ENSG00000178104:ENST00000369359:exon15:c.T1969C:p.L657L,ENSG00000178104:ENST00000530740:exon15:c.T1969C:p.L657L	Score=474;Name=lod=113	NA	1q21.1	Score=763;Name=V$TCF11MAFG_01	Name=BRF2	NA	NA	rs1698682	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.524904	1.524904	NA	NA	NA	NA	0.5	NA	8.1666666
835	1	1647814	1647814	T	C	exonic	CDK11A,CDK11B	NA	synonymous SNV	CDK11A:NM_024011:exon5:c.A459G:p.E153E,CDK11B:NM_033486:exon5:c.A459G:p.E153E,CDK11B:NM_033492:exon5:c.A426G:p.E142E,CDK11B:NM_033493:exon5:c.A426G:p.E142E,CDK11A:NM_033529:exon5:c.A429G:p.E143E,CDK11B:NM_033488:exon6:c.A324G:p.E108E,CDK11B:NM_033489:exon6:c.A357G:p.E119E	exonic	ENSG00000008128	NA	synonymous SNV	ENSG00000008128:ENST00000356200:exon4:c.A357G:p.E119E,ENSG00000008128:ENST00000509982:exon4:c.A459G:p.E153E,ENSG00000008128:ENST00000357760:exon5:c.A429G:p.E143E,ENSG00000008128:ENST00000358779:exon5:c.A429G:p.E143E,ENSG00000008128:ENST00000378633:exon5:c.A429G:p.E143E,ENSG00000008128:ENST00000378635:exon5:c.A429G:p.E143E,ENSG00000008128:ENST00000378638:exon5:c.A357G:p.E119E,ENSG00000008128:ENST00000404249:exon5:c.A459G:p.E153E,ENSG00000008128:ENST00000460465:exon5:c.A459G:p.E153E,ENSG00000008128:ENST00000479362:exon5:c.A429G:p.E143E	Score=477;Name=lod=116	NA	1p36.33	NA	NA	NA	NA	rs72901775	0.5	0.5	0.43	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5011	0.5	0.02	D	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.896	T	0.000	T	.	-0.407	2.096	0.358	-0.064	0.108	12.498	-0.40715	NA	NA	NA	NA	NA	0.058	NA	8.1655666
836	7	154862652	154862652	C	T	exonic	HTR5A	NA	nonsynonymous SNV	HTR5A:NM_024012:exon1:c.C43T:p.P15S	exonic	ENSG00000157219	NA	nonsynonymous SNV	ENSG00000157219:ENST00000287907:exon1:c.C43T:p.P15S	NA	NA	7q36.2	NA	NA	NA	NA	rs11575874	0.03	0.03	0.023	0.0269569	0.0676	NA	0.0432	0.0136	0.0194	0.06	NA	0.06	0.02	0.0434	0.06	0.56	T	0.0	B	0.0	B	0.034	N	1.000	N	0	N	1.22	T	-1.030	T	0.004	T	0.045	-0.367	2.27	0.195	-0.169	1.014	5.271	-0.367277	NA	0.11	0.058256	0.015207	NA	0.022	NA	8.1640774
836	15	89402051	89402051	A	G	exonic	ACAN	NA	nonsynonymous SNV	ACAN:NM_001135:exon12:c.A6235G:p.I2079V,ACAN:NM_013227:exon12:c.A6235G:p.I2079V	exonic	ENSG00000157766	NA	nonsynonymous SNV	ENSG00000157766:ENST00000561243:exon11:c.A6235G:p.I2079V,ENSG00000157766:ENST00000352105:exon12:c.A6235G:p.I2079V,ENSG00000157766:ENST00000439576:exon12:c.A6235G:p.I2079V,ENSG00000157766:ENST00000559004:exon12:c.A6235G:p.I2079V	NA	NA	15q26.1	NA	NA	NA	NA	rs1042630	0.66	0.66	0.672	0.645966	0.7386	0.5605	0.6182	0.6808	0.6115	0.76	0.54	0.64	0.68	0.6819	0.76	0.54	T	0.023	B	0.026	B	0.050	N	1.000	P	0.65	N	4.65	T	-0.962	T	0.000	T	0.033	-2.961	0.001	-9.69	-1.308	-1.811	1.995	-2.960603	NA	1	0.74915	0.704028	ID=COSM146363;OCCURENCE=1(stomach)	0.652	NA	8.1636834
836	1	26612460	26612460	G	A	exonic	UBXN11	NA	synonymous SNV	UBXN11:NM_001077262:exon5:c.C268T:p.L90L,UBXN11:NM_145345:exon9:c.C529T:p.L177L,UBXN11:NM_183008:exon10:c.C628T:p.L210L	exonic	ENSG00000158062	NA	synonymous SNV	ENSG00000158062:ENST00000535108:exon3:c.C154T:p.L52L,ENSG00000158062:ENST00000314675:exon5:c.C268T:p.L90L,ENSG00000158062:ENST00000436301:exon7:c.C403T:p.L135L,ENSG00000158062:ENST00000442942:exon7:c.C529T:p.L177L,ENSG00000158062:ENST00000357089:exon8:c.C529T:p.L177L,ENSG00000158062:ENST00000452980:exon8:c.C529T:p.L177L,ENSG00000158062:ENST00000374215:exon9:c.C514T:p.L172L,ENSG00000158062:ENST00000374217:exon9:c.C529T:p.L177L,ENSG00000158062:ENST00000374221:exon10:c.C628T:p.L210L,ENSG00000158062:ENST00000374222:exon10:c.C628T:p.L210L	Score=385;Name=lod=49	NA	1p36.11	NA	Name=CTCF_(SC-5916),YY1_(C-20),Sin3Ak-20,CTCF,TCF12,EBF1_(C-8),Rad21,CTCF_(C-20)	Name=53	NA	rs11247900	0.13	0.13	0.122	0.128994	0.1909	0.0228	0.1066	0.202	0.092	0.21	0.02	0.11	0.16	0.148	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.435976	1.435976	NA	0.164578	0.151228	NA	0.094	NA	8.1631886
836	4	38776107	38776107	T	G	exonic	TLR10	NA	nonsynonymous SNV	TLR10:NM_001017388:exon2:c.A1105C:p.I369L,TLR10:NM_001195106:exon3:c.A1105C:p.I369L,TLR10:NM_001195107:exon3:c.A1105C:p.I369L,TLR10:NM_001195108:exon3:c.A1063C:p.I355L,TLR10:NM_030956:exon4:c.A1105C:p.I369L	exonic	ENSG00000174123	NA	nonsynonymous SNV	ENSG00000174123:ENST00000361424:exon2:c.A1105C:p.I369L,ENSG00000174123:ENST00000506111:exon2:c.A1105C:p.I369L,ENSG00000174123:ENST00000508334:exon2:c.A1105C:p.I369L,ENSG00000174123:ENST00000308973:exon4:c.A1105C:p.I369L	NA	NA	4p14	NA	NA	Name=29	NA	rs11096955	0.48	0.48	0.49	0.499601	0.3976	0.5546	0.4179	0.5469	0.5419	0.37	0.62	0.41	0.55	0.4295	0.66	0.33	T	0.0	B	0.002	B	0.731	N	1.000	P	1.39	L	1.91	T	-0.947	T	0.000	T	0.058	0.114	4.611	1.24	0.778	-0.986	1.334	0.113581	NA	0.31	0.34314	0.506582	ID=COSM1429555;OCCURENCE=1(large_intestine)	0.594	NA	8.1630934
836	1	223285833	223285833	G	T	exonic	TLR5	NA	nonsynonymous SNV	TLR5:NM_003268:exon6:c.C541A:p.Q181K	exonic	ENSG00000187554	NA	nonsynonymous SNV	ENSG00000187554:ENST00000342210:exon4:c.C541A:p.Q181K,ENSG00000187554:ENST00000540964:exon4:c.C541A:p.Q181K,ENSG00000187554:ENST00000366881:exon6:c.C541A:p.Q181K	NA	NA	1q41	NA	NA	NA	NA	rs45528236	0.04	0.04	0.036	0.0503195	0.0606	0.0387	0.0303	0.0227	0.1033	0.06	0.03	0.04	0.03	0.0556	0.06	1	T	0.0	B	0.0	B	0.528	N	1.000	N	0.755	N	0.51	T	-1.070	T	0.012	T	0.017	-0.891	0.457	2.01	0.204	-0.289	10.089	-0.891182	NA	0.66	0.054419	0.024058	NA	0.029	NA	8.1627144
836	15	63548787	63548787	G	A	exonic	RAB8B	NA	synonymous SNV	RAB8B:NM_016530:exon5:c.G408A:p.G136G	exonic	ENSG00000166128	NA	synonymous SNV	ENSG00000166128:ENST00000321437:exon5:c.G408A:p.G136G,ENSG00000166128:ENST00000448330:exon5:c.G408A:p.G136G,ENSG00000166128:ENST00000559006:exon5:c.G408A:p.G136G	NA	NA	15q22.2	Score=748;Name=V$EVI1_01	Name=CEBPB,POU5F1_(SC-9081)	Name=117	NA	rs10851726	0.23	0.23	0.219	0.274561	0.1521	0.4663	0.2089	0.1452	0.4243	0.15	0.47	0.18	0.13	0.2132	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.69596	NA	NA	0.139535	0.13754	NA	0.196	NA	8.1618316
836	11	4567335	4567335	C	G	exonic	OR52M1	NA	nonsynonymous SNV	OR52M1:NM_001004137:exon1:c.C915G:p.S305R	exonic	ENSG00000197790	NA	nonsynonymous SNV	ENSG00000197790:ENST00000360213:exon1:c.C915G:p.S305R	NA	NA	11p15.4	NA	NA	NA	NA	rs2657167	0.39	0.39	0.418	0.425519	0.3827	0.3046	0.268	0.584	0.4918	0.35	0.34	0.3	0.58	0.3922	0.58	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-1.39	N	1.25	T	-1.021	T	0.000	T	0.116	-2.71	0	-2.88	-1.036	-0.773	2.375	-2.710022	NA	1	0.39751	0.535666	ID=COSM147108;OCCURENCE=1(stomach)	0.29	NA	8.1609234
836	19	10403368	10403368	G	A	exonic	ICAM5	NA	nonsynonymous SNV	ICAM5:NM_003259:exon5:c.G1042A:p.A348T	exonic	ENSG00000105376	NA	nonsynonymous SNV	ENSG00000105376:ENST00000221980:exon5:c.G1042A:p.A348T	NA	NA	19p13.2	NA	Name=Pol2(b),E2F6_(H-50)	NA	NA	rs2228615	0.29	0.29	0.263	0.289337	0.4066	0.2371	0.5202	0.0439	0.3906	0.41	0.25	0.48	0.02	0.3769	0.48	0.09	T	0.002	B	0.004	B	0.184	N	1.000	P	1.74	L	2.66	T	-0.939	T	0.000	T	0.023	2.082	12.92	-0.808	0.041	-1.124	5.079	2.082357	2.082357	0.18	0.38907	0.099183	NA	0.297	NA	8.1607634
836	7	91630620	91630620	G	T	exonic	AKAP9	NA	nonsynonymous SNV	AKAP9:NM_005751:exon8:c.G1389T:p.M463I,AKAP9:NM_147185:exon8:c.G1389T:p.M463I	exonic	ENSG00000127914	NA	nonsynonymous SNV	ENSG00000127914:ENST00000356239:exon8:c.G1389T:p.M463I,ENSG00000127914:ENST00000358100:exon9:c.G1425T:p.M475I,ENSG00000127914:ENST00000359028:exon9:c.G1425T:p.M475I	NA	NA	7q21.2	Score=814;Name=V$GFI1_01	NA	NA	NA	rs6964587	0.36	0.36	0.359	0.372204	0.3867	0.1617	0.3573	0.5023	0.409	0.39	0.17	0.38	0.52	0.3829	0.52	0.2	T	0.002	B	0.003	B	0.166	N	0.013	P	0	N	3.93	T	-0.965	T	0.000	T	0.044	-1.457	0.019	-3.46	-0.686	0.234	13.89	-1.456513	NA	0.14	0.403023	0.51363	NA	0.406	NA	8.1607104
836	5	79034662	79034662	C	G	exonic	CMYA5	NA	nonsynonymous SNV	CMYA5:NM_153610:exon2:c.C10074G:p.H3358Q	exonic	ENSG00000164309	NA	nonsynonymous SNV	ENSG00000164309:ENST00000446378:exon2:c.C10074G:p.H3358Q	NA	NA	5q14.1	NA	NA	NA	NA	rs3828611	0.21	0.21	0.239	NA	NA	NA	NA	NA	NA	0.06	0.41	0.04	0.33	0.1075	0.41	1	T	0.0	B	0.0	B	0.017	N	1.000	P	-2.125	N	1.99	T	-0.926	T	0.000	T	0.027	-3.265	0.001	2.2	0.154	0.422	5.808	-3.264746	NA	1	0.065805	0.225471	NA	0.21	NA	8.1600284
836	8	98703317	98703317	A	G	exonic	MTDH	NA	nonsynonymous SNV	MTDH:NM_178812:exon6:c.A949G:p.T317A	exonic	ENSG00000147649	NA	nonsynonymous SNV	ENSG00000147649:ENST00000336273:exon6:c.A949G:p.T317A,ENSG00000147649:ENST00000519934:exon6:c.A880G:p.T294A	Score=654;Name=lod=606	NA	8q22.1	NA	NA	NA	NA	rs17854374	0.03	0.03	0.02	0.0253594	0.0616	NA	0.0303	0.0008	0.044	0.06	NA	0.04	NA	0.0515	0.061	0.27	T	0.0	B	0.001	B	0.948	N	0.834	N	0.345	N	0.97	T	-1.050	T	0.008	T	0.16	1.667	11.53	0.932	-0.054	0.084	8.582	1.666828	1.666828	0.31	0.061512	0.014072	NA	0.072	NA	8.1587214
836	19	57839567	57839567	T	A	exonic	ZNF543	NA	nonsynonymous SNV	ZNF543:NM_213598:exon4:c.T737A:p.L246H	exonic	ENSG00000178229	NA	nonsynonymous SNV	ENSG00000178229:ENST00000321545:exon4:c.T737A:p.L246H	NA	NA	19q13.43	NA	Name=SETDB1	NA	NA	rs1968090	0.69	0.69	0.678	0.681709	0.7197	0.5843	0.7133	0.7716	0.5992	0.73	0.59	0.72	0.72	0.7102	0.75	0.26	T	0.0	B	0.0	B	.	.	1.000	P	2.225	M	1.96	T	-1.042	T	0.000	T	0.085	-1.166	0.092	2.33	0.328	-0.576	7.18	-1.165669	NA	0.86	0.745814	0.747844	NA	0.667	NA	8.1576194
836	19	57839150	57839150	A	G	exonic	ZNF543	NA	nonsynonymous SNV	ZNF543:NM_213598:exon4:c.A320G:p.Q107R	exonic	ENSG00000178229	NA	nonsynonymous SNV	ENSG00000178229:ENST00000321545:exon4:c.A320G:p.Q107R	NA	NA	19q13.43	NA	NA	NA	NA	rs8100491	0.69	0.69	0.652	0.682508	0.7197	0.5863	0.7133	0.7731	0.5992	0.73	0.59	0.72	0.72	0.7104	0.75	1	T	0.001	B	0.001	B	.	.	1.000	P	1.04	L	1.89	T	-0.944	T	0.000	T	0.005	-0.856	0.536	-5.73	-1.610	-2.431	6.090	-0.855603	NA	0.74	0.745814	0.747844	ID=COSM1180667;OCCURENCE=1(upper_aerodigestive_tract)	0.659	NA	8.1574194
836	13	53217270	53217270	A	G	exonic	HNRNPA1L2	NA	nonsynonymous SNV	HNRNPA1L2:NM_001011725:exon6:c.A643G:p.N215D,HNRNPA1L2:NM_001011724:exon7:c.A643G:p.N215D	exonic	ENSG00000139675	NA	nonsynonymous SNV	ENSG00000139675:ENST00000357495:exon1:c.A643G:p.N215D,ENSG00000139675:ENST00000398039:exon6:c.A643G:p.N215D,ENSG00000139675:ENST00000342657:exon7:c.A643G:p.N215D	NA	NA	13q14.3	NA	NA	NA	NA	rs9536212	0.3	0.3	0.246	0.271166	0.4384	0.2093	0.3703	0.1437	0.2648	0.42	0.2	0.37	0.17	0.3603	0.42	0.11	T	0.115	B	0.012	B	.	.	1.000	P	2.425	M	-2.16	D	-1.054	T	0.000	T	0.027	1.433	10.73	0.352	0.382	0.715	5.098	1.433411	1.433411	0.08	0.378104	0.180717	NA	0.043	NA	8.1565294
836	7	128038555	128038555	C	G	exonic	IMPDH1	NA	synonymous SNV	IMPDH1:NM_001142575:exon6:c.G657C:p.L219L,IMPDH1:NM_001142573:exon7:c.G732C:p.L244L,IMPDH1:NM_001142574:exon7:c.G717C:p.L239L,IMPDH1:NM_183243:exon8:c.G879C:p.L293L,IMPDH1:NM_001102605:exon9:c.G957C:p.L319L,IMPDH1:NM_001142576:exon9:c.G888C:p.L296L,IMPDH1:NM_000883:exon10:c.G987C:p.L329L	exonic	ENSG00000106348	NA	synonymous SNV	ENSG00000106348:ENST00000496200:exon6:c.G657C:p.L219L,ENSG00000106348:ENST00000343214:exon7:c.G657C:p.L219L,ENSG00000106348:ENST00000378717:exon7:c.G780C:p.L260L,ENSG00000106348:ENST00000470772:exon7:c.G729C:p.L243L,ENSG00000106348:ENST00000480861:exon7:c.G717C:p.L239L,ENSG00000106348:ENST00000497868:exon7:c.G780C:p.L260L,ENSG00000106348:ENST00000348127:exon8:c.G879C:p.L293L,ENSG00000106348:ENST00000354269:exon9:c.G957C:p.L319L,ENSG00000106348:ENST00000419067:exon9:c.G888C:p.L296L,ENSG00000106348:ENST00000338791:exon10:c.G987C:p.L329L	Score=643;Name=lod=545	NA	7q32.1	Score=886;Name=V$E47_02	Name=CTCF	NA	NA	rs2288550	0.13	0.13	0.132	0.130192	0.1789	0.121	0.1023	0.0537	0.2127	0.18	0.12	0.09	0.06	0.1609	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.922843	NA	NA	0.170814	0.076487	NA	0.08	NA	8.1560526
836	12	18435452	18435452	C	T	exonic	PIK3C2G	NA	nonsynonymous SNV	PIK3C2G:NM_004570:exon2:c.C437T:p.P146L	exonic	ENSG00000139144	NA	nonsynonymous SNV	ENSG00000139144:ENST00000266497:exon1:c.C437T:p.P146L,ENSG00000139144:ENST00000538779:exon1:c.C437T:p.P146L,ENSG00000139144:ENST00000546003:exon1:c.C437T:p.P146L,ENSG00000139144:ENST00000433979:exon2:c.C437T:p.P146L,ENSG00000139144:ENST00000535651:exon2:c.C437T:p.P146L	NA	NA	12p12.3	NA	NA	NA	NA	rs11044004	0.34	0.34	0.325	0.353235	0.3917	0.3046	0.4078	0.3616	0.3139	0.4	0.27	0.36	0.33	0.3865	0.4	0.38	T	0.003	B	0.009	B	0.000	N	1.000	P	0.55	N	1.22	T	-1.054	T	0.000	T	0.079	1.474	10.87	3.9	1.634	0.398	9.175	1.474091	1.474091	1	0.399312	0.355764	NA	0.304	NA	8.1558214
836	20	47872377	47872377	C	G	exonic	ZNFX1	NA	nonsynonymous SNV	ZNFX1:NM_021035:exon9:c.G2772C:p.Q924H	exonic	ENSG00000124201	NA	nonsynonymous SNV	ENSG00000124201:ENST00000371744:exon9:c.G2772C:p.Q924H,ENSG00000124201:ENST00000371752:exon9:c.G2772C:p.Q924H,ENSG00000124201:ENST00000371754:exon9:c.G2772C:p.Q924H,ENSG00000124201:ENST00000396105:exon9:c.G2772C:p.Q924H	Score=510;Name=lod=157	NA	20q13.13	Score=959;Name=V$MYOD_Q6	NA	NA	NA	rs238221	0.62	0.62	0.617	0.566893	0.7505	0.4563	0.6081	0.5333	0.5082	0.74	0.43	0.65	0.61	0.6729	0.75	0.18	T	0.0	B	0.004	B	0.003	N	0.717	P	0.835	L	1.96	T	-0.942	T	0.000	T	0.507	2.268	13.54	2.34	0.791	-0.033	4.986	2.268106	2.268106	0.14	0.754651	0.561734	NA	0.609	NA	8.1552824
837	1	220970028	220970028	A	G	exonic	MARC1	NA	nonsynonymous SNV	MARC1:NM_022746:exon3:c.A493G:p.T165A	exonic	ENSG00000186205	NA	nonsynonymous SNV	ENSG00000186205:ENST00000366910:exon3:c.A493G:p.T165A	NA	NA	1q41	NA	Name=CTCF	NA	NA	rs2642438	0.81	0.81	0.809	0.809505	0.7217	0.7679	0.7767	0.9508	0.7751	0.75	0.81	0.77	0.93	0.7542	0.93	1	T	0.0	B	0.001	B	0.001	N	1.000	P	-1.99	N	1.97	T	-0.972	T	0.000	T	0.344	-1.699	0.011	3.91	0.466	3.901	10.917	-1.699379	NA	1	0.703256	0.919882	NA	0.768	NA	8.1541774
837	13	98896776	98896776	C	T	exonic	FARP1	NA	nonsynonymous SNV	FARP1:NM_001001715:exon3:c.C203T:p.T68I	exonic	ENSG00000152767	NA	nonsynonymous SNV	ENSG00000152767:ENST00000376581:exon3:c.C203T:p.T68I	NA	NA	13q32.2	NA	NA	Name=2	NA	rs7318267	0.4	0.4	0.378	0.376997	0.3787	0.6171	0.3804	0.1891	0.3793	0.39	0.63	0.36	0.19	0.4052	0.63	0	D	0.001	B	0.001	B	.	.	1.000	P	0	N	0.65	T	-0.947	T	0.000	T	0.012	1.16	9.722	-0.857	-0.241	0.015	0.567	1.160042	NA	0	0.395465	0.225601	NA	0.471	NA	8.1539684
837	6	31322911	31322911	C	T	exonic	HLA-B	NA	nonsynonymous SNV	HLA-B:NM_005514:exon5:c.G985A:p.A329T	exonic	ENSG00000234745	NA	nonsynonymous SNV	ENSG00000234745:ENST00000412585:exon5:c.G985A:p.A329T	NA	NA	6p21.33	NA	Name=Pol2,Pol2-4H8	Name=2	NA	rs1051488	0.47	0.47	0.433	0.536941	0.3827	0.5556	0.4971	0.6573	0.5419	0.35	0.52	0.49	0.58	0.4427	0.58	0.1	T	0.0	B	0.002	B	.	.	1.000	P	.	.	6.09	T	-0.991	T	0.001	T	0.18	0.844	8.411	1.67	0.660	-0.118	8.138	0.844238	NA	0.12	0.355297	0.575116	ID=COSM328606;OCCURENCE=3(kidney)	0.514	NA	8.1526364
837	3	8955389	8955389	C	T	exonic	RAD18	NA	nonsynonymous SNV	RAD18:NM_020165:exon8:c.G905A:p.R302Q	exonic	ENSG00000070950	NA	nonsynonymous SNV	ENSG00000070950:ENST00000264926:exon8:c.G905A:p.R302Q	Score=541;Name=lod=211	NA	3p25.3	NA	NA	NA	NA	rs373572	0.63	0.63	0.652	0.647564	0.7624	0.3591	0.7118	0.6543	0.772	0.76	0.4	0.67	0.67	0.6951	0.76	0.76	T	0.001	B	0.0	B	0.000	N	1.000	P	-1.995	N	1.85	T	-0.988	T	0.000	T	0.02	0.558	7.019	4.47	0.849	2.422	7.022	0.558314	NA	0.79	0.72415	0.665531	NA	0.754	NA	8.1516834
837	19	19651140	19651140	A	G	exonic	CILP2	NA	synonymous SNV	CILP2:NM_153221:exon3:c.A291G:p.E97E	exonic	ENSG00000160161	NA	synonymous SNV	ENSG00000160161:ENST00000291495:exon3:c.A291G:p.E97E,ENSG00000160161:ENST00000586018:exon3:c.A309G:p.E103E	Score=657;Name=lod=626	NA	19p13.11	Score=868;Name=V$ELK1_01	Name=Max,E2F6_(H-50),E2F6,c-Myc,USF-1	NA	NA	rs4808970	0.12	0.12	0.104	0.118411	0.168	NA	0.1167	0.1626	0.1309	0.15	NA	0.14	0.22	0.2019	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.375565	1.375565	NA	0.146082	0.142657	ID=COSM439021;OCCURENCE=1(breast)	0.109	NA	8.1506846
837	19	17100552	17100552	A	G	exonic	CPAMD8	NA	synonymous SNV	CPAMD8:NM_015692:exon13:c.T1437C:p.P479P	exonic	ENSG00000160111	NA	synonymous SNV	ENSG00000160111:ENST00000443236:exon13:c.T1437C:p.P479P	NA	NA	19p13.11	NA	NA	NA	NA	rs1973093	0.61	0.61	0.616	0.608427	0.5239	0.629	0.5043	0.8563	0.4131	0.5	0.61	0.53	0.85	0.5133	0.85	.	.	.	.	.	.	.	.	0.002	P	.	.	.	.	-1.031	T	0.000	T	.	-1.431	0.021	-5.73	-1.715	-1.443	3.567	-1.430601	NA	NA	0.481414	0.788991	NA	0.536	NA	8.1480526
837	22	32875190	32875190	G	A	exonic	FBXO7	NA	nonsynonymous SNV	FBXO7:NM_001033024:exon2:c.G108A:p.M36I,FBXO7:NM_001257990:exon2:c.G3A:p.M1I,FBXO7:NM_012179:exon2:c.G345A:p.M115I	exonic	ENSG00000100225	NA	nonsynonymous SNV	ENSG00000100225:ENST00000266087:exon2:c.G345A:p.M115I,ENSG00000100225:ENST00000382058:exon2:c.G108A:p.M36I,ENSG00000100225:ENST00000397426:exon2:c.G3A:p.M1I,ENSG00000100225:ENST00000444207:exon2:c.G3A:p.M1I,ENSG00000100225:ENST00000452138:exon2:c.G108A:p.M36I	NA	NA	22q12.3	NA	NA	Name=19	NA	rs11107	0.49	0.49	0.466	0.48742	0.3748	0.6915	0.5663	0.4047	0.4489	0.39	0.69	0.53	0.38	0.44	0.69	0.19	T	0.0	B	0.0	B	0.043	N	0.000	P	-2.015	N	1.27	T	-0.912	T	0.000	T	0.257	-0.776	0.741	-3.63	-0.629	-0.024	0.443	-0.77634	NA	0.35	0.372326	0.37222	NA	0.435	NA	8.1462074
837	2	29416366	29416366	G	C	exonic	ALK	NA	nonsynonymous SNV	ALK:NM_004304:exon29:c.C4587G:p.D1529E	exonic	ENSG00000171094	NA	nonsynonymous SNV	ENSG00000171094:ENST00000431873:exon4:c.C1077G:p.D359E,ENSG00000171094:ENST00000389048:exon29:c.C4587G:p.D1529E	NA	NA	2p23.2	NA	NA	NA	NA	rs1881421	0.57	0.57	0.545	0.572883	0.3837	0.7292	0.5706	0.643	0.5133	0.4	0.73	0.53	0.66	0.46	0.73	1	T	0.0	B	0.0	B	0.119	N	1.000	P	-1.78	N	1.7	T	-0.993	T	0.000	T	0.008	-0.382	2.203	-3.42	-1.464	-0.022	11.802	-0.382484	NA	1	0.343837	0.608488	NA	0.587	NA	8.1457964
837	15	79058013	79058013	C	T	exonic	ADAMTS7	NA	nonsynonymous SNV	ADAMTS7:NM_014272:exon19:c.G4240A:p.G1414S	exonic	ENSG00000136378	NA	nonsynonymous SNV	ENSG00000136378:ENST00000388820:exon19:c.G4240A:p.G1414S	Score=415;Name=lod=65	NA	15q25.1	NA	NA	NA	NA	rs2929155	0.67	0.67	0.67	0.670128	0.7604	0.5903	0.6729	0.7186	0.592	0.73	0.57	0.64	0.7	0.6795	0.75	0.64	T	0.0	B	0.0	B	0.004	N	1.000	P	-1.78	N	0.21	T	-0.952	T	0.000	T	0.06	-1.159	0.096	4.37	0.521	2.233	7.690	-1.159009	NA	1	0.747896	0.743941	NA	0.348	NA	8.1455374
837	16	68721533	68721533	G	C	exonic	CDH3	NA	nonsynonymous SNV	CDH3:NM_001793:exon12:c.G1689C:p.Q563H	exonic	ENSG00000062038	NA	nonsynonymous SNV	ENSG00000062038:ENST00000581171:exon11:c.G1524C:p.Q508H,ENSG00000062038:ENST00000264012:exon12:c.G1689C:p.Q563H,ENSG00000062038:ENST00000429102:exon12:c.G1689C:p.Q563H	Score=419;Name=lod=67	NA	16q22.1	NA	NA	NA	NA	rs1126933	0.36	0.36	0.333	0.309904	0.4046	0.5139	0.3991	0.0242	0.3252	0.42	0.53	0.39	0.03	0.3658	0.53	0.43	T	0.029	B	0.008	B	0.001	N	0.051	P	1.005	L	0.13	T	-0.919	T	0.000	T	0.303	0.489	6.651	-3.29	-0.578	-0.055	7.683	0.488628	NA	0.18	0.417442	0.090082	NA	0.42	NA	8.1454914
837	14	61857969	61857969	A	G	exonic	PRKCH	NA	synonymous SNV	PRKCH:NM_006255:exon2:c.A390G:p.V130V	exonic	ENSG00000027075	NA	synonymous SNV	ENSG00000027075:ENST00000332981:exon2:c.A390G:p.V130V,ENSG00000027075:ENST00000553830:exon2:c.A216G:p.V72V	Score=524;Name=lod=179	NA	14q23.1	NA	Name=NFKB	Name=15	NA	rs2230499	0.27	0.27	0.238	0.277556	0.163	0.248	0.1873	0.4955	0.1953	0.16	0.25	0.19	0.5	0.1987	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.599096	NA	NA	0.159884	0.405583	NA	0.246	NA	8.1450826
838	20	44184498	44184498	A	G	exonic	WFDC8	NA	nonsynonymous SNV	WFDC8:NM_130896:exon4:c.T287C:p.M96T,WFDC8:NM_181510:exon4:c.T287C:p.M96T	exonic	ENSG00000158901	NA	nonsynonymous SNV	ENSG00000158901:ENST00000289953:exon4:c.T287C:p.M96T,ENSG00000158901:ENST00000357199:exon4:c.T287C:p.M96T	NA	NA	20q13.12	NA	NA	NA	NA	rs2272955	0.12	0.12	0.123	0.103435	0.0567	0.1716	0.0634	0.1694	0.0204	0.06	0.18	0.07	0.19	0.0736	0.19	0.86	T	0.001	B	0.001	B	0.058	N	1.000	P	0.445	N	0.47	T	-1.053	T	0.000	T	0.033	-1.344	0.03	-3.81	-0.787	-0.262	10.238	-1.343661	NA	0.73	0.058953	0.162279	ID=COSM149185;OCCURENCE=1(stomach)	0.087	NA	8.1440804
838	10	95459817	95459817	C	T	exonic	FRA10AC1	NA	nonsynonymous SNV	FRA10AC1:NM_145246:exon2:c.G47A:p.R16H	exonic	ENSG00000148690	NA	nonsynonymous SNV	ENSG00000148690:ENST00000359204:exon2:c.G47A:p.R16H,ENSG00000148690:ENST00000371430:exon2:c.G47A:p.R16H,ENSG00000148690:ENST00000394100:exon2:c.G47A:p.R16H,ENSG00000148690:ENST00000536233:exon2:c.G47A:p.R16H	Score=569;Name=lod=275	NA	10q23.33	NA	NA	NA	NA	rs726817	0.66	0.66	0.647	0.622604	0.7495	0.6885	0.6729	0.469	0.5961	0.75	0.7	0.7	0.47	0.6979	0.75	0.3	T	0.001	B	0.001	B	0.049	N	1.000	P	-0.345	N	1.96	T	-1.027	T	0.000	T	0.047	0.784	8.136	4.07	0.958	0.538	5.582	0.7842	NA	0.46	0.742093	0.509986	NA	0.674	NA	8.1438404
838	16	68719113	68719113	G	A	exonic	CDH3	NA	nonsynonymous SNV	CDH3:NM_001793:exon11:c.G1430A:p.R477H	exonic	ENSG00000062038	NA	nonsynonymous SNV	ENSG00000062038:ENST00000581171:exon10:c.G1265A:p.R422H,ENSG00000062038:ENST00000264012:exon11:c.G1430A:p.R477H,ENSG00000062038:ENST00000429102:exon11:c.G1430A:p.R477H	Score=376;Name=lod=45	NA	16q22.1	NA	NA	NA	NA	rs34494880	0.03	0.03	0.03	0.0259585	0.0596	NA	0.0173	0.0023	0.0562	0.07	NA	0.02	0.002	0.055	0.075	0.21	T	0.007	B	0.008	B	0.843	N	0.994	N	0.82	L	0.61	T	-1.050	T	0.007	T	0.045	1.585	11.26	0.567	0.072	-0.843	0.912	1.584836	1.584836	0.24	0.075	0.014786	NA	0.022	NA	8.1437334
838	12	52912906	52912906	G	T	exonic	KRT5	NA	synonymous SNV	KRT5:NM_000424:exon2:c.C594A:p.T198T	exonic	ENSG00000186081	NA	synonymous SNV	ENSG00000186081:ENST00000252242:exon2:c.C594A:p.T198T,ENSG00000186081:ENST00000549420:exon3:c.C264A:p.T88T	Score=569;Name=lod=273	NA	12q13.13	Score=708;Name=V$PPARG_02	NA	NA	NA	rs641621	0.25	0.25	0.082	0.215056	0.2823	0.3393	0.2233	0.1089	0.1554	0.27	0.35	0.25	0.12	0.2413	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.478727	1.478727	NA	NA	NA	NA	0.268	CLINSIG=untested;CLNDBN=not_provided,not_provided;CLNREVSTAT=not,not;CLNACC=RCV000056637.1,RCV000056636.1;CLNDSDB=.,.;CLNDSDBID=.,.	8.1430666
838	9	91994101	91994101	G	A	exonic	SEMA4D	NA	nonsynonymous SNV	SEMA4D:NM_006378:exon18:c.C2107T:p.P703S	exonic	ENSG00000187764	NA	nonsynonymous SNV	ENSG00000187764:ENST00000422704:exon16:c.C2107T:p.P703S,ENSG00000187764:ENST00000450295:exon16:c.C2107T:p.P703S,ENSG00000187764:ENST00000356444:exon17:c.C2107T:p.P703S,ENSG00000187764:ENST00000438547:exon18:c.C2107T:p.P703S	NA	NA	9q22.2	NA	NA	NA	NA	rs62638726	0.03	0.03	0.027	0.0361422	0.0636	NA	0.0303	0.003	0.0941	0.06	NA	0.04	0.01	0.0601	0.087	0.53	T	0.008	B	0.003	B	0.483	N	1.000	P	0.46	N	-1.23	T	-1.026	T	0.022	T	0.056	-1.781	0.01	0.315	0.193	1.401	6.319	-1.781393	NA	1	0.067674	0.013391	NA	0.058	NA	8.1419594
838	6	151670172	151670172	A	C	exonic	AKAP12	NA	nonsynonymous SNV	AKAP12:NM_144497:exon2:c.A352C:p.K118Q,AKAP12:NM_005100:exon4:c.A646C:p.K216Q	exonic	ENSG00000131016	NA	nonsynonymous SNV	ENSG00000131016:ENST00000354675:exon2:c.A352C:p.K118Q,ENSG00000131016:ENST00000359755:exon2:c.A331C:p.K111Q,ENSG00000131016:ENST00000253332:exon3:c.A646C:p.K216Q,ENSG00000131016:ENST00000402676:exon4:c.A646C:p.K216Q	Score=340;Name=lod=32	NA	6q25.1	NA	NA	NA	NA	rs3734799	0.58	0.58	0.548	0.54393	0.7614	0.4593	0.6254	0.3638	0.593	0.76	0.51	0.64	0.34	0.6729	0.76	0.77	T	0.001	B	0.001	B	0.559	N	1.000	P	-1.79	N	3.18	T	-0.922	T	0.002	T	0.037	-1.287	0.041	4.49	1.443	0.834	8.281	-1.286511	NA	0.99	0.758605	0.426691	NA	0.58	NA	8.1404284
838	11	8707233	8707233	C	T	exonic	RPL27A	NA	synonymous SNV	RPL27A:NM_000990:exon5:c.C327T:p.Y109Y	exonic	ENSG00000166441	NA	synonymous SNV	ENSG00000166441:ENST00000530913:exon2:c.C156T:p.Y52Y,ENSG00000166441:ENST00000526562:exon4:c.C156T:p.Y52Y,ENSG00000166441:ENST00000530022:exon4:c.C156T:p.Y52Y,ENSG00000166441:ENST00000314138:exon5:c.C327T:p.Y109Y,ENSG00000166441:ENST00000524496:exon5:c.C156T:p.Y52Y,ENSG00000166441:ENST00000532359:exon5:c.C222T:p.Y74Y	Score=663;Name=lod=659	NA	11p15.4	NA	Name=p300,SP1	Name=9	NA	rs6735	0.19	0.19	0.16	0.185304	0.1779	0.2798	0.17	0.0946	0.229	0.19	0.26	0.21	0.09	0.1793	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.895059	NA	NA	0.170391	0.103362	NA	0.188	NA	8.1390756
838	19	44056412	44056412	C	T	exonic	XRCC1	NA	nonsynonymous SNV	XRCC1:NM_006297:exon9:c.G839A:p.R280H	exonic	ENSG00000073050	NA	nonsynonymous SNV	ENSG00000073050:ENST00000543982:exon8:c.G746A:p.R249H,ENSG00000073050:ENST00000262887:exon9:c.G839A:p.R280H,ENSG00000073050:ENST00000598165:exon9:c.G860A:p.R287H	NA	NA	19q13.31	NA	NA	NA	NA	rs25489	0.06	0.06	0.066	0.0670927	0.0586	0.1002	0.0648	0.0257	0.0992	0.06	0.09	0.07	0.01	0.0881	0.098	0.08	T	0.954	P	0.481	P	0.945	N	1.000	P	1.79	L	4.15	T	-0.951	T	0.001	T	0.178	2.183	13.26	-0.704	0.006	0.834	4.900	2.183362	2.183362	0.11	0.048395	0.031804	ID=COSM1394288;OCCURENCE=1(large_intestine)	0.065	NA	8.1382384
838	18	9887497	9887497	G	A	exonic	TXNDC2	NA	nonsynonymous SNV	TXNDC2:NM_001098529:exon2:c.G1021A:p.E341K,TXNDC2:NM_032243:exon2:c.G820A:p.E274K	exonic	ENSG00000168454	NA	nonsynonymous SNV	ENSG00000168454:ENST00000306084:exon2:c.G1021A:p.E341K,ENSG00000168454:ENST00000357775:exon2:c.G820A:p.E274K	NA	NA	18p11.22	NA	NA	NA	NA	rs11081510	0.75	0.75	0.776	0.800319	0.7137	0.999	0.8271	0.6944	0.8088	0.66	0.95	0.73	0.67	0.764	0.95	.	.	0.028	B	0.021	B	.	.	1.000	P	1.585	L	2.34	T	-1.010	T	0.000	T	0.035	1.369	10.5	-3.77	-1.211	-3.459	13.314	1.368774	1.368774	NA	0.717442	0.718566	NA	0.594	NA	8.1381914
838	18	44585955	44585955	G	A	exonic	KATNAL2	NA	nonsynonymous SNV	KATNAL2:NM_031303:exon5:c.G263A:p.S88N	exonic	ENSG00000167216	NA	nonsynonymous SNV	ENSG00000167216:ENST00000245121:exon5:c.G263A:p.S88N,ENSG00000167216:ENST00000356157:exon6:c.G479A:p.S160N,ENSG00000167216:ENST00000585469:exon6:c.G419A:p.S140N	NA	NA	18q21.1	NA	NA	NA	NA	rs7233515	0.41	0.41	0.389	0.435304	0.3718	0.4752	0.562	0.3457	0.4908	0.37	0.45	0.53	0.35	0.4236	0.53	0.38	T	0.001	B	0.003	B	0.976	N	1.000	P	0.4	N	-3.34	D	-1.049	T	0.000	T	0.038	1.493	10.94	-4.83	-0.685	-0.937	6.742	1.492908	1.492908	0.21	0.399767	0.347027	NA	0.275	NA	8.1381664
838	20	36668874	36668874	G	A	exonic	RPRD1B	NA	synonymous SNV	RPRD1B:NM_021215:exon2:c.G189A:p.A63A	exonic	ENSG00000101413	NA	synonymous SNV	ENSG00000101413:ENST00000373433:exon2:c.G189A:p.A63A,ENSG00000101413:ENST00000495457:exon2:c.G189A:p.A63A	Score=694;Name=lod=885	NA	20q11.23	Score=755;Name=V$MEF2_04	Name=JunD,c-Jun	NA	NA	rs2273353	0.23	0.23	0.225	0.290735	0.164	0.2163	0.134	0.4962	0.3313	0.17	0.17	0.15	0.47	0.2008	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.125817	NA	NA	0.164302	0.43347	ID=COSM1179793;OCCURENCE=1(prostate)	0.188	NA	8.1375646
838	7	57528997	57528997	T	C	exonic	ZNF716	NA	nonsynonymous SNV	ZNF716:NM_001159279:exon4:c.T830C:p.V277A	exonic	ENSG00000182111	NA	nonsynonymous SNV	ENSG00000182111:ENST00000420713:exon4:c.T830C:p.V277A	Score=317;Name=lod=26	NA	7p11.2	NA	Name=SETDB1,ZNF274	NA	NA	rs10272498	0.41	0.41	0.403	0.421126	0.3797	0.5397	0.4798	0.3215	0.4346	0.37	0.54	0.44	0.33	0.423	0.54	1	T	0.0	B	0.0	B	.	.	1.000	P	-0.89	N	1.37	T	-0.947	T	0.000	T	0.019	-2.103	0.006	0.195	-0.675	0.056	2.236	-2.10313	NA	1	0.393149	0.346821	NA	0.449	NA	8.1374844
838	22	32754230	32754230	A	G	exonic	RFPL3	NA	nonsynonymous SNV	RFPL3:NM_001098535:exon1:c.A172G:p.T58A,RFPL3:NM_006604:exon2:c.A85G:p.T29A	exonic	ENSG00000128276	NA	nonsynonymous SNV	ENSG00000128276:ENST00000249007:exon1:c.A172G:p.T58A,ENSG00000128276:ENST00000382088:exon1:c.A85G:p.T29A,ENSG00000128276:ENST00000397468:exon2:c.A85G:p.T29A	NA	NA	22q12.3	NA	NA	NA	NA	rs57676160	0.14	0.14	0.088	0.147165	0.0427	0.4603	0.0951	0.0295	0.1278	0.04	0.42	0.09	0.02	0.0999	0.42	0.9	T	0.0	B	0.001	B	.	.	1.000	P	0.83	L	-3.48	D	-0.967	T	0.000	T	0.02	-2.102	0.006	-1.24	-2.719	0.834	.	-2.102065	NA	0.74	0.053372	0.039719	NA	0.007	NA	8.1373614
838	18	48190440	48190440	G	A	exonic	MAPK4	NA	nonsynonymous SNV	MAPK4:NM_002747:exon2:c.G112A:p.V38M	exonic	ENSG00000141639	NA	nonsynonymous SNV	ENSG00000141639:ENST00000400384:exon2:c.G112A:p.V38M,ENSG00000141639:ENST00000588540:exon2:c.G112A:p.V38M,ENSG00000141639:ENST00000592595:exon2:c.G112A:p.V38M	NA	NA	18q21.1	NA	NA	NA	NA	rs3752087	0.33	0.33	0.326	0.307508	0.4354	0.4187	0.2579	0.1135	0.3589	0.4	0.43	0.31	0.14	0.3656	0.43	0.08	T	0.939	P	0.729	P	0.498	N	1.000	P	1.57	L	0.89	T	-0.996	T	0.000	T	0.03	0.729	7.874	-4.07	-0.635	0.262	14.095	0.728811	NA	0.08	0.39533	0.153737	NA	0.471	NA	8.1370034
838	14	94936107	94936107	G	A	exonic	SERPINA9	NA	nonsynonymous SNV	SERPINA9:NM_001042518:exon2:c.C125T:p.A42V,SERPINA9:NM_175739:exon2:c.C125T:p.A42V	exonic	ENSG00000170054	NA	nonsynonymous SNV	ENSG00000170054:ENST00000298845:exon2:c.C125T:p.A42V,ENSG00000170054:ENST00000337425:exon2:c.C125T:p.A42V,ENSG00000170054:ENST00000380365:exon2:c.C71T:p.A24V	NA	NA	14q32.13	NA	NA	NA	NA	rs4905204	0.06	0.06	0.054	0.0726837	0.0755	0.1181	0.0331	0.0144	0.1299	0.06	0.12	0.04	0.02	0.059	0.12	0.23	T	0.0	B	0.001	B	0.054	N	1.000	P	0	N	-2.31	D	-0.952	T	0.010	T	0.025	-0.114	3.44	0.963	-0.298	0.285	5.952	-0.114198	NA	0	0.061841	0.022886	NA	0.051	NA	8.1369924
838	21	47552385	47552385	C	T	exonic	COL6A2	NA	synonymous SNV	COL6A2:NM_001849:exon28:c.C2979T:p.R993R	exonic	ENSG00000142173	NA	synonymous SNV	ENSG00000142173:ENST00000300527:exon28:c.C2979T:p.R993R	Score=511;Name=lod=159	NA	21q22.3	Score=800;Name=V$YY1_02	NA	NA	NA	rs6652	0.11	0.11	0.145	0.0924521	0.1978	0.0288	0.0749	0.0893	0.0665	0.19	0.03	0.09	0.08	0.1373	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.049328	NA	NA	0.195162	0.112903	NA	0.181	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000079889.2;CLNDSDB=.;CLNDSDBID=.	8.1364046
838	22	32754306	32754306	T	C	exonic	RFPL3	NA	nonsynonymous SNV	RFPL3:NM_001098535:exon1:c.T248C:p.M83T,RFPL3:NM_006604:exon2:c.T161C:p.M54T	exonic	ENSG00000128276	NA	nonsynonymous SNV	ENSG00000128276:ENST00000249007:exon1:c.T248C:p.M83T,ENSG00000128276:ENST00000382088:exon1:c.T161C:p.M54T,ENSG00000128276:ENST00000397468:exon2:c.T161C:p.M54T	NA	NA	22q12.3	NA	NA	NA	NA	rs16987625	0.16	0.16	0.134	0.145767	0.0408	0.4583	0.0908	0.0303	0.1268	0.04	0.45	0.1	0.02	0.1011	0.45	0.43	T	0.0	B	0.0	B	.	.	1.000	P	0	N	1.98	T	-0.924	T	0.000	T	0.033	-2.141	0.005	-1.7	-2.354	-0.115	2.436	-2.141191	NA	0.06	0.055116	0.046074	NA	0.08	NA	8.1363174
839	12	71016340	71016340	C	T	exonic	PTPRB	NA	nonsynonymous SNV	PTPRB:NM_001109754:exon3:c.G538A:p.G180S	exonic	ENSG00000127329	NA	nonsynonymous SNV	ENSG00000127329:ENST00000334414:exon3:c.G538A:p.G180S,ENSG00000127329:ENST00000550358:exon3:c.G538A:p.G180S,ENSG00000127329:ENST00000551525:exon3:c.G535A:p.G179S	NA	NA	12q15	NA	NA	NA	NA	rs7298147	0.02	0.02	0.027	0.0197684	0.0507	NA	0.0216	0.0061	0.0256	0.05	NA	0.02	0.02	0.0777	0.072	0.86	T	0.0	B	0.0	B	.	.	1.000	N	-0.695	N	4.28	T	-0.914	T	0.001	T	0.033	-0.472	1.822	2.04	0.112	0.393	5.724	-0.47211	NA	0.88	0.071741	0.012267	NA	0.029	NA	8.1331924
839	13	41835039	41835039	T	C	exonic	MTRF1	NA	nonsynonymous SNV	MTRF1:NM_004294:exon2:c.A5G:p.N2S	exonic	ENSG00000120662	NA	nonsynonymous SNV	ENSG00000120662:ENST00000379480:exon2:c.A5G:p.N2S,ENSG00000120662:ENST00000430347:exon3:c.A44G:p.N15S,ENSG00000120662:ENST00000452359:exon3:c.A5G:p.N2S,ENSG00000120662:ENST00000379477:exon4:c.A5G:p.N2S	Score=452;Name=lod=92	NA	13q14.11	NA	NA	NA	NA	rs9532758	0.07	0.07	0.074	0.0706869	0.0656	0.003	0.0418	0.1702	0.0317	0.07	0.01	0.05	0.18	0.0678	0.18	0.55	T	0.01	B	0.005	B	0.378	N	0.996	P	0.145	N	3.05	T	-0.938	T	0.000	T	0.069	1.63	11.41	-0.275	0.036	0.594	9.832	1.629583	1.629583	0.5	0.067093	0.155697	NA	0.058	NA	8.1328404
839	12	86198935	86198935	C	T	exonic	RASSF9	NA	nonsynonymous SNV	RASSF9:NM_005447:exon2:c.G853A:p.A285T	exonic	ENSG00000198774	NA	nonsynonymous SNV	ENSG00000198774:ENST00000361228:exon2:c.G853A:p.A285T	NA	NA	12q21.31	NA	NA	NA	NA	rs7397266	0.06	0.06	0.046	0.0433307	0.0656	0.0466	0.0922	0.0265	0.0051	0.06	0.05	0.08	0.03	0.0605	0.08	0.37	T	0.116	B	0.051	B	0.149	U	1.000	P	1.04	L	0.89	T	-1.057	T	0.005	T	0.114	0.727	7.867	2.54	0.479	0.283	8.261	0.72729	NA	0.22	0.074756	0.036158	NA	0.072	NA	8.1324774
839	5	179267949	179267949	T	C	exonic	C5orf45	NA	nonsynonymous SNV	C5orf45:NM_001017987:exon4:c.A295G:p.R99G,C5orf45:NM_016175:exon6:c.A460G:p.R154G	exonic	ENSG00000161010	NA	nonsynonymous SNV	ENSG00000161010:ENST00000376931:exon4:c.A295G:p.R99G,ENSG00000161010:ENST00000520698:exon4:c.A295G:p.R99G,ENSG00000161010:ENST00000523084:exon5:c.A58G:p.R20G,ENSG00000161010:ENST00000292586:exon6:c.A460G:p.R154G,ENSG00000161010:ENST00000518219:exon6:c.A460G:p.R154G,ENSG00000161010:ENST00000518235:exon6:c.A460G:p.R154G,ENSG00000161010:ENST00000403396:exon7:c.A586G:p.R196G	Score=295;Name=lod=21	NA	5q35.3	NA	Name=ZNF263,Pol2	Name=18	NA	rs248248	0.83	0.83	0.818	0.846845	0.7097	0.8958	0.8458	0.9546	0.7924	0.7	0.91	0.78	0.96	0.7849	0.96	0.26	T	0.254	B	0.05	B	0.309	N	0.000	P	0	N	3.19	T	-1.048	T	0.000	T	0.044	1.3	10.26	1.61	0.191	0.596	5.128	1.299845	1.299845	0.28	0.706395	0.909215	NA	0.819	NA	8.1323384
839	21	46086758	46086758	C	T	exonic	KRTAP12-2	NA	nonsynonymous SNV	KRTAP12-2:NM_181684:exon1:c.G46A:p.A16T	exonic	ENSG00000221864	NA	nonsynonymous SNV	ENSG00000221864:ENST00000360770:exon1:c.G46A:p.A16T	NA	NA	21q22.3	NA	Name=HA-E2F1,c-Myc	Name=3	NA	rs13046903	0.68	0.68	0.717	0.771166	0.7624	0.6597	0.7493	0.8608	0.7894	0.68	0.59	0.71	0.78	0.7386	0.84	0.31	T	0.002	B	0.005	B	.	.	1.000	P	-0.945	N	4.08	T	-1.102	T	0.000	T	0.011	0.584	7.155	-0.954	-0.448	-4.558	9.965	0.584458	NA	NA	0.704096	0.840037	NA	NA	NA	8.1282374
839	12	116408538	116408538	A	G	exonic	MED13L	NA	synonymous SNV	MED13L:NM_015335:exon27:c.T5928C:p.T1976T	exonic	ENSG00000123066	NA	synonymous SNV	ENSG00000123066:ENST00000281928:exon27:c.T5928C:p.T1976T	Score=569;Name=lod=273	NA	12q24.21	NA	NA	NA	NA	rs2304460	0.15	0.15	0.15	0.152756	0.1899	0.1696	0.1311	0.0696	0.2249	0.17	0.16	0.14	0.12	0.1694	0.18	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.041	T	0.000	T	.	1.172	9.767	3.21	0.534	0.413	1.737	1.171638	NA	NA	0.180465	0.093509	ID=COSM147620;OCCURENCE=1(stomach)	0.159	NA	8.1269016
839	19	1110829	1110829	G	A	exonic	SBNO2	NA	synonymous SNV	SBNO2:NM_001100122:exon23:c.C2772T:p.N924N,SBNO2:NM_014963:exon26:c.C2943T:p.N981N	exonic	ENSG00000064932	NA	synonymous SNV	ENSG00000064932:ENST00000438103:exon23:c.C2772T:p.N924N,ENSG00000064932:ENST00000361757:exon26:c.C2943T:p.N981N,ENSG00000064932:ENST00000587024:exon26:c.C2913T:p.N971N	Score=607;Name=lod=389	NA	19p13.3	Score=857;Name=V$GRE_C	Name=GR,AP-2gamma	Name=33	NA	rs2302109	0.55	0.55	0.529	0.558307	0.505	0.4405	0.6383	0.6604	0.5399	0.5	0.45	0.6	0.69	0.5352	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.162668	NA	NA	0.500473	0.666905	NA	0.536	NA	8.1259936
840	13	76395464	76395464	C	T	exonic	LMO7	NA	nonsynonymous SNV	LMO7:NM_015842:exon11:c.C1660T:p.P554S,LMO7:NM_005358:exon13:c.C1513T:p.P505S	exonic	ENSG00000136153	NA	nonsynonymous SNV	ENSG00000136153:ENST00000526202:exon9:c.C1210T:p.P404S,ENSG00000136153:ENST00000465261:exon11:c.C1660T:p.P554S,ENSG00000136153:ENST00000321797:exon12:c.C1660T:p.P554S,ENSG00000136153:ENST00000377499:exon12:c.C1357T:p.P453S,ENSG00000136153:ENST00000341547:exon13:c.C1513T:p.P505S,ENSG00000136153:ENST00000357063:exon15:c.C2515T:p.P839S,ENSG00000136153:ENST00000377534:exon15:c.C2515T:p.P839S	NA	NA	13q22.2	NA	NA	NA	NA	rs41286126	0.07	0.07	0.071	0.0712859	0.0755	0.0407	0.0562	0.0764	0.1022	0.07	0.05	0.06	0.09	0.0639	0.09	0.57	T	0.023	B	0.01	B	0.716	N	1.000	P	0.77	N	1.58	T	-1.044	T	0.005	T	0.185	-0.334	2.415	2.02	0.403	0.059	8.172	-0.334386	NA	0.37	0.069419	0.061507	NA	0.029	NA	8.1245144
840	8	77690563	77690563	T	C	exonic	ZFHX4	NA	synonymous SNV	ZFHX4:NM_024721:exon4:c.T3213C:p.H1071H	exonic	ENSG00000091656	NA	synonymous SNV	ENSG00000091656:ENST00000518282:exon3:c.T3135C:p.H1045H,ENSG00000091656:ENST00000050961:exon4:c.T3135C:p.H1045H,ENSG00000091656:ENST00000455469:exon4:c.T3135C:p.H1045H,ENSG00000091656:ENST00000521891:exon4:c.T3213C:p.H1071H	Score=503;Name=lod=147	NA	8q21.11	Score=826;Name=V$HNF1_C	NA	Name=15	NA	rs16939357	0.34	0.34	0.344	0.334864	0.167	0.3929	0.2147	0.5983	0.1769	0.17	0.43	0.23	0.58	0.2211	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.033523	NA	NA	0.154541	0.531144	NA	0.304	NA	8.1240256
840	22	38121152	38121152	C	A	exonic	TRIOBP	NA	nonsynonymous SNV	TRIOBP:NM_001039141:exon7:c.C2589A:p.N863K	exonic	ENSG00000100106	NA	nonsynonymous SNV	ENSG00000100106:ENST00000406386:exon7:c.C2589A:p.N863K	NA	NA	22q13.1	NA	NA	NA	NA	rs9610841	0.38	0.38	0.338	0.336262	0.3877	0.5863	0.2853	0.1536	0.3088	0.39	0.58	0.31	0.17	0.3925	0.58	0.04	D	0.421	B	0.058	B	.	.	1.000	P	1.975	M	2.05	T	-0.951	T	0.000	T	0.04	3.064	16.23	1.51	0.622	-0.011	4.962	3.063622	3.063622	0.05	0.429187	0.175789	NA	0.377	NA	8.1239464
840	11	26621117	26621117	A	C	exonic	ANO3	NA	synonymous SNV	ANO3:NM_031418:exon17:c.A1692C:p.A564A	exonic	ENSG00000134343	NA	synonymous SNV	ENSG00000134343:ENST00000531568:exon14:c.A1254C:p.A418A,ENSG00000134343:ENST00000256737:exon17:c.A1692C:p.A564A,ENSG00000134343:ENST00000525139:exon17:c.A1644C:p.A548A,ENSG00000134343:ENST00000537978:exon18:c.A1644C:p.A548A	Score=521;Name=lod=175	NA	11p14.2	NA	Name=STAT3	Name=59	NA	rs11604868	0.21	0.21	0.189	0.162939	0.2058	0.3224	0.1268	0.0794	0.093	0.2	0.33	0.19	0.08	0.1605	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.42637	1.42637	NA	0.177716	0.087835	NA	0.159	NA	8.1226506
840	11	95512060	95512060	A	G	exonic	FAM76B	NA	synonymous SNV	FAM76B:NM_144664:exon8:c.T754C:p.L252L	exonic	ENSG00000077458	NA	synonymous SNV	ENSG00000077458:ENST00000358780:exon8:c.T754C:p.L252L,ENSG00000077458:ENST00000536839:exon8:c.T751C:p.L251L	Score=717;Name=lod=1094	NA	11q21	Score=723;Name=V$SRF_01	Name=BATF,SRF	Name=5	NA	rs1150360	0.57	0.57	0.605	0.577276	0.5119	0.3433	0.4942	0.9274	0.4714	0.51	0.39	0.54	0.92	0.5212	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.441861	NA	NA	0.513325	0.844173	NA	0.601	NA	8.1202416
840	18	44561619	44561619	G	C	exonic	TCEB3B	NA	nonsynonymous SNV	TCEB3B:NM_016427:exon1:c.C17G:p.T6S	exonic	ENSG00000206181	NA	nonsynonymous SNV	ENSG00000206181:ENST00000332567:exon1:c.C17G:p.T6S	NA	NA	18q21.1	NA	NA	NA	NA	rs61738602	0.06	0.06	0.062	0.0379393	0.0835	0.0069	0.0418	0.0499	0.0041	0.09	0.01	0.05	0.07	0.0574	0.09	1	T	0.012	B	0.003	B	0.016	N	1.000	P	-1.185	N	3.51	T	-0.974	T	0.000	T	0.015	-3.777	0.001	-0.39	-2.617	-1.886	.	-3.777083	NA	0.44	0.072226	0.059718	NA	0.138	NA	8.1202074
840	19	53345110	53345110	A	G	exonic	ZNF468	NA	nonsynonymous SNV	ZNF468:NM_001008801:exon4:c.T437C:p.L146S	exonic	ENSG00000204604	NA	nonsynonymous SNV	ENSG00000204604:ENST00000390651:exon4:c.T278C:p.L93S,ENSG00000204604:ENST00000595646:exon4:c.T437C:p.L146S,ENSG00000204604:ENST00000396409:exon5:c.T278C:p.L93S	NA	NA	19q13.41	NA	NA	NA	NA	rs61729942	0.07	0.07	0.061	NA	NA	NA	NA	NA	NA	0.09	0.05	0.08	0.05	0.1068	0.11	1	T	0.0	B	0.0	B	.	.	1.000	P	-1.57	N	3.57	T	-0.987	T	0.000	T	0.075	-2.235	0.005	-1.89	-1.263	0.107	2.889	-2.234614	NA	0.8	0.106395	0.09192	NA	0.101	NA	8.1201384
840	9	14747412	14747412	A	G	exonic	FREM1	NA	synonymous SNV	FREM1:NM_001177704:exon10:c.T1467C:p.V489V,FREM1:NM_144966:exon34:c.T5859C:p.V1953V	exonic	ENSG00000164946	NA	synonymous SNV	ENSG00000164946:ENST00000380894:exon10:c.T1467C:p.V489V,ENSG00000164946:ENST00000380880:exon33:c.T5859C:p.V1953V,ENSG00000164946:ENST00000380881:exon34:c.T5862C:p.V1954V,ENSG00000164946:ENST00000422223:exon34:c.T5859C:p.V1953V	NA	NA	9p22.3	Score=858;Name=V$STAT5A_01	Name=GATA-2,c-Fos	Name=18	NA	rs4741426	0.15	0.15	0.117	0.13738	0.1839	0.1806	0.2161	0.0076	0.1646	0.19	0.17	0.2	0.01	0.1702	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.241565	NA	NA	0.192961	0.041733	NA	0.101	NA	8.1196056
840	1	227935444	227935444	A	G	exonic	SNAP47	NA	nonsynonymous SNV	SNAP47:NM_053052:exon2:c.A142G:p.R48G	exonic	ENSG00000143740	NA	nonsynonymous SNV	ENSG00000143740:ENST00000315781:exon2:c.A142G:p.R48G,ENSG00000143740:ENST00000366759:exon2:c.A142G:p.R48G	Score=391;Name=lod=52	NA	1q42.13	NA	NA	NA	NA	rs2236359	0.42	0.42	0.397	0.419329	0.3996	0.3651	0.4928	0.4826	0.3579	0.4	0.37	0.46	0.47	0.4018	0.47	0.21	T	0.001	B	0.002	B	0.439	N	0.000	P	1.175	L	2.31	T	-0.933	T	0.000	T	0.411	0.437	6.376	1.67	0.139	2.485	4.557	0.437453	NA	0.18	0.412791	0.439628	NA	0.355	NA	8.1191424
840	16	2138269	2138269	T	C	exonic	TSC2	NA	synonymous SNV	TSC2:NM_001077183:exon39:c.T5001C:p.D1667D,TSC2:NM_001114382:exon40:c.T5133C:p.D1711D,TSC2:NM_000548:exon41:c.T5202C:p.D1734D	exonic	ENSG00000103197	NA	synonymous SNV	ENSG00000103197:ENST00000382538:exon38:c.T4857C:p.D1619D,ENSG00000103197:ENST00000439673:exon38:c.T4893C:p.D1631D,ENSG00000103197:ENST00000401874:exon39:c.T5001C:p.D1667D,ENSG00000103197:ENST00000568454:exon39:c.T5034C:p.D1678D,ENSG00000103197:ENST00000350773:exon40:c.T5133C:p.D1711D,ENSG00000103197:ENST00000353929:exon40:c.T5073C:p.D1691D,ENSG00000103197:ENST00000219476:exon41:c.T5202C:p.D1734D	Score=591;Name=lod=336	NA	16p13.3	Score=812;Name=V$CDPCR3_01	NA	NA	NA	rs1748	0.26	0.26	0.26	0.276358	0.1839	NA	0.1988	0.7481	0.0736	0.18	NA	0.22	0.71	0.1883	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.828928	NA	NA	0.178065	0.63444	NA	0.275	CLINSIG=untested;CLNDBN=Tuberous_sclerosis_syndrome,Tuberous_sclerosis_syndrome|Lymphangiomyomatosis|Tuberous_sclerosis_syndrome|not_specified;CLNREVSTAT=not,not|not|not|single;CLNACC=RCV000055236.1,RCV000043161.2|RCV000055450.1|RCV000055450.1|RCV000118713.2;CLNDSDB=GeneReviews:MedGen:OMIM:SNOMED_CT,GeneReviews:MedGen:OMIM:SNOMED_CT|MedGen:OMIM:Orphanet:SNOMED_CT|GeneReviews:MedGen:OMIM:SNOMED_CT|.;CLNDSDBID=NBK1220:C0041341:191100:7199000,NBK1220:C0041341:191100:7199000|C0751674:606690:ORPHA538:73017001|NBK1220:C0041341:191100:7199000|.	8.1164016
841	7	100028187	100028187	C	T	exonic	MEPCE	NA	synonymous SNV	MEPCE:NM_019606:exon1:c.C546T:p.P182P	exonic	ENSG00000146834	NA	synonymous SNV	ENSG00000146834:ENST00000310512:exon1:c.C546T:p.P182P	Score=548;Name=lod=224	NA	7q22.1	NA	Name=SP1,PU.1,Pol2,GABP,ETS1,ELF1_(SC-631),Pol2-4H8,ZNF263,Sin3Ak-20	Name=67	NA	rs6975729	0.12	0.12	0.11	0.117013	0.1928	0.0218	0.1196	0.1354	0.1104	0.19	0.01	0.12	0.11	0.1624	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.686866	NA	NA	0.196512	0.152816	NA	0.109	NA	8.1149546
841	3	130992385	130992385	T	C	exonic	NEK11	NA	nonsynonymous SNV	NEK11:NM_024800:exon17:c.T1685C:p.V562A	exonic	ENSG00000114670	NA	nonsynonymous SNV	ENSG00000114670:ENST00000510769:exon13:c.T1370C:p.V457A,ENSG00000114670:ENST00000412440:exon14:c.T1133C:p.V378A,ENSG00000114670:ENST00000508196:exon15:c.T1685C:p.V562A,ENSG00000114670:ENST00000429253:exon16:c.T1685C:p.V562A,ENSG00000114670:ENST00000383366:exon17:c.T1685C:p.V562A	NA	NA	3q22.1	NA	Name=CTCF	NA	NA	rs16836266	0.19	0.19	0.179	0.189297	0.0537	0.2837	0.1844	0.3139	0.0665	0.04	0.3	0.17	0.3	0.1065	0.3	0.52	T	0.0	B	0.001	B	0.260	N	1.000	P	-0.895	N	-0.2	T	-1.041	T	0.000	T	0.031	-1.758	0.01	1.66	0.059	0.378	12.175	-1.758049	NA	0.37	0.059651	0.26759	NA	0.145	NA	8.1134824
841	3	167051769	167051769	T	C	exonic	ZBBX	NA	nonsynonymous SNV	ZBBX:NM_001199201:exon10:c.A533G:p.K178R,ZBBX:NM_001199202:exon10:c.A446G:p.K149R,ZBBX:NM_024687:exon10:c.A533G:p.K178R	exonic	ENSG00000169064	NA	nonsynonymous SNV	ENSG00000169064:ENST00000307529:exon7:c.A533G:p.K178R,ENSG00000169064:ENST00000392767:exon7:c.A533G:p.K178R,ENSG00000169064:ENST00000455345:exon9:c.A533G:p.K178R,ENSG00000169064:ENST00000392764:exon10:c.A446G:p.K149R,ENSG00000169064:ENST00000392766:exon10:c.A533G:p.K178R	Score=321;Name=lod=27	NA	3q26.1	NA	NA	NA	NA	rs11923054	0.27	0.27	0.25	0.25619	0.4115	0.1786	0.3343	0.0711	0.3712	0.41	0.18	0.35	0.1	0.3832	0.43	0.22	T	0.215	B	0.097	B	0.004	U	0.984	P	1.845	L	1.54	T	-0.924	T	0.000	T	0.05	0.673	7.602	1.08	0.287	1.631	6.851	0.67302	NA	0.17	0.425579	0.128083	NA	0.341	NA	8.1130544
841	11	5906291	5906291	T	C	exonic	OR52E4	NA	nonsynonymous SNV	OR52E4:NM_001005165:exon1:c.T769C:p.F257L	exonic	ENSG00000180974	NA	nonsynonymous SNV	ENSG00000180974:ENST00000316987:exon1:c.T769C:p.F257L	Score=445;Name=lod=86	NA	11p15.4	NA	NA	NA	NA	rs11823842	0.38	0.38	0.356	0.357428	0.4085	0.3641	0.402	0.3207	0.316	0.42	0.36	0.42	0.31	0.3902	0.42	0.54	T	0.0	B	0.008	B	0.003	N	0.000	P	-0.24	N	8.95	T	-1.232	T	0.000	T	0.076	0.513	6.783	3.94	0.923	-0.489	6.806	0.513407	NA	0.49	0.421788	0.339618	NA	0.355	NA	8.1128454
841	4	76722353	76722353	G	A	exonic	USO1	NA	unknown	UNKNOWN	exonic	ENSG00000138768	NA	synonymous SNV	ENSG00000138768:ENST00000514213:exon17:c.G1941A:p.Q647Q,ENSG00000138768:ENST00000538159:exon18:c.G2013A:p.Q671Q	Score=592;Name=lod=340	NA	4q21.1	NA	Name=c-Fos	Name=34	NA	rs324726	0.71	0.71	0.668	0.652556	0.7604	0.8859	0.768	0.3449	0.635	0.77	0.9	0.79	0.34	0.7183	0.9	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.019	T	0.000	T	.	1.235	10.02	1.24	-0.361	2.553	14.550	1.23531	1.23531	NA	0.743468	0.37961	NA	0.58	NA	8.1111653
841	14	24736961	24736961	T	C	exonic	RABGGTA	NA	nonsynonymous SNV	RABGGTA:NM_004581:exon13:c.A1258G:p.T420A,RABGGTA:NM_182836:exon14:c.A1258G:p.T420A	exonic	ENSG00000100949	NA	nonsynonymous SNV	ENSG00000100949:ENST00000560243:exon3:c.A166G:p.T56A,ENSG00000100949:ENST00000560777:exon7:c.A85G:p.T29A,ENSG00000100949:ENST00000399409:exon13:c.A1258G:p.T420A,ENSG00000100949:ENST00000216840:exon14:c.A1258G:p.T420A,ENSG00000100949:ENST00000558376:exon14:c.A1262G:p.N421S,ENSG00000100949:ENST00000559974:exon14:c.A1262G:p.N421S	NA	NA	14q12	NA	NA	NA	NA	rs729421	0.56	0.56	0.55	0.602436	0.3837	0.6181	0.5519	0.7663	0.6258	0.4	0.62	0.52	0.76	0.4669	0.76	1	T	0.0	B	0.0	B	0.003	N	1.000	P	-1.355	N	1.02	T	-0.948	T	0.000	T	0.123	-0.337	2.403	3.66	0.768	1.958	7.889	-0.337163	NA	1	0.372128	0.694061	NA	0.442	NA	8.1106054
841	14	20757804	20757804	C	A	exonic	TTC5	NA	synonymous SNV	TTC5:NM_138376:exon10:c.G1305T:p.S435S	exonic	ENSG00000136319	NA	synonymous SNV	ENSG00000136319:ENST00000258821:exon10:c.G1305T:p.S435S	NA	NA	14q11.2	NA	NA	NA	NA	rs3737220	0.11	0.11	0.109	0.116414	0.1918	0.0972	0.0821	0.0333	0.1953	0.19	0.09	0.09	0.03	0.165	0.2	.	.	.	.	.	.	.	.	0.500	P	.	.	.	.	-1.108	T	0.000	T	.	-1.054	0.191	-11.0	-3.884	-5.813	3.448	-1.05354	NA	NA	0.200465	0.052882	NA	0.094	NA	8.1094016
841	3	197579466	197579466	C	T	exonic	LRCH3	NA	nonsynonymous SNV	LRCH3:NM_032773:exon13:c.C1565T:p.P522L	exonic	ENSG00000186001	NA	nonsynonymous SNV	ENSG00000186001:ENST00000433298:exon2:c.C56T:p.P19L,ENSG00000186001:ENST00000452660:exon2:c.C98T:p.P33L,ENSG00000186001:ENST00000536618:exon8:c.C350T:p.P117L,ENSG00000186001:ENST00000441090:exon10:c.C1103T:p.P368L,ENSG00000186001:ENST00000334859:exon13:c.C1565T:p.P522L,ENSG00000186001:ENST00000414675:exon13:c.C1481T:p.P494L,ENSG00000186001:ENST00000425562:exon13:c.C1565T:p.P522L,ENSG00000186001:ENST00000438796:exon13:c.C1565T:p.P522L	NA	NA	3q29	NA	NA	NA	NA	rs36078463	0.1	0.1	0.098	0.105232	0.0746	0.1835	0.0447	0.115	0.0859	0.08	0.16	0.05	0.1	0.0764	0.16	0.1	T	0.01	B	0.015	B	0.015	N	1.000	P	0.46	N	2.38	T	-1.080	T	0.000	T	0.148	-0.076	3.629	2.74	0.740	0.499	3.888	-0.076024	NA	0.06	0.073605	0.1069	NA	0.072	NA	8.1087284
841	17	79095144	79095144	G	A	exonic	AATK	NA	synonymous SNV	AATK:NM_004920:exon10:c.C2283T:p.A761A,AATK:NM_001080395:exon11:c.C2592T:p.A864A	exonic	ENSG00000181409	NA	synonymous SNV	ENSG00000181409:ENST00000570932:exon1:c.C162T:p.A54A,ENSG00000181409:ENST00000417379:exon10:c.C2283T:p.A761A,ENSG00000181409:ENST00000326724:exon11:c.C2592T:p.A864A,ENSG00000181409:ENST00000374792:exon12:c.C2484T:p.A828A	NA	NA	17q25.3	NA	Name=CTCF	NA	NA	rs8073904	0.8	0.8	0.803	0.805312	0.8628	0.8611	0.634	0.795	0.8241	0.86	0.84	0.68	0.76	0.8247	0.87	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.098	T	0.000	T	.	-0.86	0.526	-8.95	-4.297	-8.005	4.398	-0.859811	NA	NA	0.871056	0.81019	NA	0.768	NA	8.1081106
841	6	25776949	25776949	G	A	exonic	SLC17A4	NA	nonsynonymous SNV	SLC17A4:NM_005495:exon9:c.G1114A:p.A372T	exonic	ENSG00000146039	NA	nonsynonymous SNV	ENSG00000146039:ENST00000439485:exon4:c.G424A:p.A142T,ENSG00000146039:ENST00000397076:exon5:c.G424A:p.A142T,ENSG00000146039:ENST00000377905:exon9:c.G1114A:p.A372T	NA	Name=Cardiovascular disease risk factors	6p22.2	NA	NA	NA	NA	rs11754288	0.24	0.24	0.242	0.259984	0.4205	0.1726	0.2781	0.053	0.4519	0.42	0.15	0.3	0.04	0.3671	0.44	0.36	T	0.178	B	0.155	B	0.078	N	1.000	P	0.115	N	0.31	T	-1.064	T	0.038	T	0.102	3.615	18.4	-2.34	-0.335	0.261	4.082	3.61505	3.61505	0.33	0.439651	0.111212	NA	0.275	NA	8.1060824
841	6	26200083	26200083	A	G	exonic	HIST1H2BF	NA	synonymous SNV	HIST1H2BF:NM_003522:exon1:c.A297G:p.V99V	exonic	ENSG00000197846	NA	synonymous SNV	ENSG00000197846:ENST00000359985:exon1:c.A297G:p.V99V	Score=662;Name=lod=652	NA	6p22.2	NA	Name=HEY1,CCNT2,Pol2,GATA3_(SC-268),Pol2-4H8,GATA-2,HA-E2F1,ETS1,ZBTB33	Name=66	Score=56;Name=2017098_1_-_56	rs1059486	0.62	0.62	0.576	0.649561	0.5089	0.9187	0.6066	0.5325	0.7055	0.49	0.93	0.59	0.5	0.5702	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.244025	1.244025	NA	0.482442	0.503177	NA	0.493	NA	8.1051246
841	20	47865509	47865509	G	A	exonic	ZNFX1	NA	nonsynonymous SNV	ZNFX1:NM_021035:exon14:c.C4052T:p.T1351I	exonic	ENSG00000124201	NA	nonsynonymous SNV	ENSG00000124201:ENST00000371752:exon14:c.C4052T:p.T1351I,ENSG00000124201:ENST00000396105:exon14:c.C4052T:p.T1351I	NA	NA	20q13.13	Score=689;Name=V$PPARG_02	NA	NA	NA	rs238209	0.64	0.64	0.636	0.59984	0.7634	0.5278	0.6412	0.5053	0.6043	0.75	0.52	0.67	0.59	0.6951	0.77	0.73	T	0.0	B	0.0	B	0.062	N	0.374	P	-0.155	N	-2.16	D	-0.954	T	0.000	T	0.018	-1.472	0.018	0.723	-0.099	1.379	5.609	-1.472392	NA	1	0.769767	0.532683	NA	0.616	NA	8.1050664
842	17	42084067	42084067	T	C	exonic	NAGS	NA	synonymous SNV	NAGS:NM_153006:exon4:c.T1086C:p.F362F	exonic	ENSG00000161653	NA	synonymous SNV	ENSG00000161653:ENST00000293404:exon4:c.T1086C:p.F362F,ENSG00000161653:ENST00000589767:exon4:c.T993C:p.F331F	Score=451;Name=lod=91	NA	17q21.31	NA	Name=Pol2,E2F6,E2F6_(H-50),HMGN3,CEBPB,Max	Name=148	NA	rs55708447	0.11	0.11	0.113	0.106829	0.2097	0.0139	0.111	0.0915	0.1145	0.2	0.02	0.13	0.08	0.1678	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.619031	1.619031	NA	0.18492	0.09575	NA	0.043	NA	8.1042466
842	8	12878807	12878807	T	G	exonic	KIAA1456	NA	nonsynonymous SNV	KIAA1456:NM_001099677:exon2:c.T241G:p.C81G,KIAA1456:NM_020844:exon5:c.T619G:p.C207G	exonic	ENSG00000250305	NA	nonsynonymous SNV	ENSG00000250305:ENST00000524591:exon5:c.T619G:p.C207G	NA	NA	8p22	NA	NA	NA	NA	rs3739310	0.7	0.7	0.663	0.64996	0.7714	0.7798	0.7262	0.4614	0.592	0.76	0.77	0.73	0.49	0.7095	0.77	0.44	T	0.0	B	0.0	B	0.546	N	1.000	P	1.935	M	2.97	T	-0.954	T	0.000	T	0.093	1.446	10.78	-6.48	-0.657	-1.528	1.675	1.446493	1.446493	0.54	0.748368	0.508128	NA	0.572	NA	8.1040654
842	19	8176640	8176640	C	T	exonic	FBN3	NA	nonsynonymous SNV	FBN3:NM_032447:exon31:c.G3976A:p.V1326I	exonic	ENSG00000142449	NA	nonsynonymous SNV	ENSG00000142449:ENST00000270509:exon31:c.G3976A:p.V1326I,ENSG00000142449:ENST00000600128:exon32:c.G3976A:p.V1326I,ENSG00000142449:ENST00000601739:exon32:c.G3976A:p.V1326I	NA	NA	19p13.2	NA	NA	NA	NA	rs12975322	0.31	0.31	0.277	0.282748	0.2326	0.4206	0.3905	0.2322	0.184	0.24	0.43	0.35	0.26	0.2565	0.43	0.19	T	0.557	P	0.102	B	0.105	U	1.000	P	-0.325	N	-2.22	D	-0.977	T	0.000	T	0.019	0.759	8.02	1.72	0.131	-0.922	6.808	0.759456	NA	0.54	0.24186	0.255561	ID=COSM1397731;OCCURENCE=1(large_intestine)	0.254	NA	8.1023734
842	2	241622209	241622209	T	C	exonic	AQP12B	NA	nonsynonymous SNV	AQP12B:NM_001102467:exon1:c.A46G:p.T16A	exonic	ENSG00000185176	NA	nonsynonymous SNV	ENSG00000185176:ENST00000407834:exon1:c.A46G:p.T16A	Score=304;Name=lod=23	NA	2q37.3	Score=847;Name=V$TAL1BETAE47_01	NA	NA	NA	rs4081908	0.63	0.63	0.61	0.694688	0.7694	0.5069	0.8357	0.7579	0.6258	0.66	0.49	0.75	0.63	0.7088	0.75	.	.	0.0	B	0.0	B	0.283	N	1.000	P	.	.	2.83	T	-1.071	T	0.000	T	0.027	-1.577	0.014	2.25	0.122	0.034	5.883	-1.576585	NA	1	0.754629	0.720737	NA	0.268	NA	8.1005044
842	5	79029726	79029726	T	A	exonic	CMYA5	NA	nonsynonymous SNV	CMYA5:NM_153610:exon2:c.T5138A:p.I1713N	exonic	ENSG00000164309	NA	nonsynonymous SNV	ENSG00000164309:ENST00000446378:exon2:c.T5138A:p.I1713N	NA	NA	5q14.1	NA	NA	NA	NA	rs16877141	0.21	0.21	0.246	0.183107	0.0596	0.3621	0.0476	0.2821	0.0879	0.06	0.41	0.04	0.34	0.1077	0.41	0.04	D	0.119	B	0.025	B	.	.	1.000	P	0.69	N	0.81	T	-0.946	T	0.000	T	0.206	1.289	10.22	0.472	0.322	-0.191	4.437	1.288914	1.288914	0.01	0.065642	0.228004	NA	0.217	NA	8.1003914
842	19	56717353	56717353	A	G	intergenic	ZSCAN5B,ZSCAN5A	dist=12932;dist=15326	NA	NA	exonic	ENSG00000204532	NA	nonsynonymous SNV	ENSG00000204532:ENST00000376267:exon1:c.A71G:p.Q24R,ENSG00000204532:ENST00000534327:exon2:c.A71G:p.Q24R	NA	NA	19q13.43	NA	NA	NA	NA	rs10419548	0.44	0.44	0.399	0.45627	0.3549	0.4702	0.402	0.6127	0.3732	0.35	0.47	0.36	0.58	0.3785	0.58	0.74	T	.	.	.	.	.	.	1.000	P	.	.	3.35	T	-0.944	T	0.000	T	0.028	-2.585	0	-2.57	-2.591	-3.702	0.530	-2.584802	NA	1	NA	NA	NA	0.529	NA	8.0999334
842	4	47839929	47839929	C	T	exonic	CORIN	NA	nonsynonymous SNV	CORIN:NM_006587:exon1:c.G38A:p.C13Y	exonic	ENSG00000145244	NA	nonsynonymous SNV	ENSG00000145244:ENST00000273857:exon1:c.G38A:p.C13Y,ENSG00000145244:ENST00000502252:exon1:c.G38A:p.C13Y,ENSG00000145244:ENST00000504584:exon1:c.G38A:p.C13Y,ENSG00000145244:ENST00000505909:exon1:c.G38A:p.C13Y	NA	NA	4p12	NA	NA	NA	NA	rs2289433	0.71	0.71	0.701	0.69349	0.7495	0.6875	0.7363	0.5749	0.772	0.77	0.72	0.75	0.58	0.7369	0.77	0.87	T	0.0	B	0.0	B	0.353	N	1.000	P	-0.55	N	-2.36	D	-1.028	T	0.000	T	0.025	-1.449	0.019	-4.22	-1.322	-0.870	7.196	-1.448693	NA	1	0.748023	0.621652	NA	0.732	NA	8.0989104
842	3	191093175	191093175	T	A	exonic	CCDC50	NA	nonsynonymous SNV	CCDC50:NM_178335:exon6:c.T773A:p.I258N	exonic	ENSG00000152492	NA	nonsynonymous SNV	ENSG00000152492:ENST00000392456:exon6:c.T773A:p.I258N	NA	NA	3q28	NA	NA	NA	NA	rs2028574	0.5	0.5	0.513	0.501597	0.4105	0.4702	0.4683	0.7231	0.3517	0.42	0.44	0.46	0.72	0.4284	0.72	0.76	T	0.0	B	0.0	B	0.157	N	1.000	P	.	.	1.66	T	-0.946	T	0.000	T	0.017	-2.181	0.005	-3.51	-0.512	-0.452	0.270	-2.181485	NA	0.73	0.395814	0.670676	NA	0.464	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000041448.1;CLNDSDB=.;CLNDSDBID=.	8.0986194
842	8	23423697	23423697	G	A	exonic	SLC25A37	NA	nonsynonymous SNV	SLC25A37:NM_016612:exon2:c.G287A:p.R96Q	exonic	ENSG00000147454	NA	nonsynonymous SNV	ENSG00000147454:ENST00000290075:exon2:c.G287A:p.R96Q,ENSG00000147454:ENST00000417331:exon2:c.G287A:p.R96Q,ENSG00000147454:ENST00000519973:exon2:c.G287A:p.R96Q,ENSG00000147454:ENST00000523930:exon2:c.G230A:p.R77Q	Score=518;Name=lod=170	NA	8p21.2	NA	NA	NA	NA	rs3736032	0.13	0.13	0.133	0.147764	0.0716	0.1607	0.0533	0.2345	0.1626	0.07	0.16	0.06	0.23	0.0938	0.23	0.23	T	0.055	B	0.014	B	0.015	N	0.181	P	1.48	L	-1.3	T	-1.110	T	0.000	T	0.159	2.871	15.56	0.223	-0.019	0.052	6.666	2.87092	2.87092	0.12	0.069448	0.210498	NA	0.109	NA	8.0984854
842	17	39240661	39240661	C	G	exonic	KRTAP4-7	NA	nonsynonymous SNV	KRTAP4-7:NM_033061:exon1:c.C203G:p.T68S	exonic	ENSG00000240871	NA	nonsynonymous SNV	ENSG00000240871:ENST00000391417:exon1:c.C203G:p.T68S	NA	NA	17q21.2	NA	NA	NA	NA	rs11650484	0.59	0.59	0.654	0.644768	0.6203	0.4177	0.634	0.9433	0.5082	0.57	0.38	0.6	0.87	0.6155	0.87	1	T	0.0	B	0.0	B	0.001	N	1.000	P	.	.	5.16	T	-1.010	T	0.000	T	0.065	-2.356	0.004	-3.84	-0.884	-2.567	3.948	-2.356434	NA	1	NA	NA	NA	0.036	NA	8.0975334
842	19	9048342	9048342	C	T	exonic	MUC16	NA	nonsynonymous SNV	MUC16:NM_024690:exon5:c.G33289A:p.V11097M	exonic	ENSG00000181143	NA	nonsynonymous SNV	ENSG00000181143:ENST00000397910:exon5:c.G33289A:p.V11097M	NA	NA	19p13.2	NA	NA	NA	NA	rs10854118	0.43	0.43	0.426	0.438498	0.4245	0.497	0.4092	0.4062	0.4571	0.42	0.49	0.41	0.37	0.4104	0.49	0	D	0.006	B	0.009	B	.	.	.	.	1.06	L	4.14	T	-0.957	T	0.000	T	0.009	0.052	4.287	-0.543	-0.200	-5.431	2.210	0.052413	NA	0.03	0.400942	0.40146	ID=COSM148477,COSM148478;OCCURENCE=1(stomach)	0.391	NA	8.0974914
842	7	21932044	21932044	C	T	exonic	DNAH11	NA	nonsynonymous SNV	DNAH11:NM_001277115:exon77:c.C12509T:p.T4170I	exonic	ENSG00000105877	NA	nonsynonymous SNV	ENSG00000105877:ENST00000409508:exon77:c.C12509T:p.T4170I,ENSG00000105877:ENST00000328843:exon78:c.C12530T:p.T4177I	Score=395;Name=lod=54	NA	7p15.3	NA	NA	NA	NA	rs12537531	0.37	0.37	0.35	0.368411	0.4245	0.4673	0.3026	0.2511	0.4141	0.43	0.44	0.32	0.21	0.3979	0.44	0.36	T	0.0	B	0.001	B	0.221	N	1.000	P	.	.	3.36	T	-0.936	T	0.000	T	0.063	0.651	7.494	0.875	-0.034	1.474	6.494	0.651356	NA	1	0.413515	0.270534	NA	0.377	NA	8.0974184
842	5	1065399	1065399	C	T	exonic	SLC12A7	NA	synonymous SNV	SLC12A7:NM_006598:exon18:c.G2436A:p.V812V	exonic	ENSG00000113504	NA	synonymous SNV	ENSG00000113504:ENST00000264930:exon18:c.G2436A:p.V812V	NA	NA	5p15.33	NA	NA	NA	NA	rs737154	0.56	0.56	0.524	0.554513	0.5288	0.627	0.5749	0.5136	0.547	0.51	0.65	0.57	0.51	0.5332	0.65	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.980	T	0.000	T	.	0.511	6.771	-8.98	-2.135	-2.628	3.252	0.51117	NA	NA	0.507442	0.50749	ID=COSM448402;OCCURENCE=1(breast)	0.536	NA	8.0972246
842	6	170033086	170033086	G	A	exonic	WDR27	NA	nonsynonymous SNV	WDR27:NM_001202550:exon18:c.C1799T:p.A600V,WDR27:NM_182552:exon21:c.C2180T:p.A727V	exonic	ENSG00000184465	NA	nonsynonymous SNV	ENSG00000184465:ENST00000423258:exon18:c.C1799T:p.A600V,ENSG00000184465:ENST00000333572:exon21:c.C2180T:p.A727V,ENSG00000184465:ENST00000448612:exon21:c.C2180T:p.A727V	NA	NA	6q27	NA	NA	NA	NA	rs9396946	0.22	0.22	0.195	0.214257	0.0537	0.5923	0.2709	0.0885	0.1196	0.05	0.57	0.23	0.08	0.1358	0.57	0.65	T	0.231	B	0.04	B	0.052	N	1.000	P	1.155	L	1.79	T	-1.028	T	0.024	T	0.056	0.182	4.979	3.24	0.498	0.849	4.807	0.181869	NA	0.35	0.04801	0.081758	NA	0.116	NA	8.0958234
842	11	56310222	56310222	C	T	exonic	OR5M11	NA	nonsynonymous SNV	OR5M11:NM_001005245:exon1:c.G512A:p.S171N	exonic	ENSG00000255223	NA	nonsynonymous SNV	ENSG00000255223:ENST00000528616:exon1:c.G512A:p.S171N	Score=469;Name=lod=107	NA	11q12.1	Score=826;Name=V$FOXO3_01	NA	NA	NA	rs628524	0.68	0.68	0.658	0.69389	0.7455	0.875	0.7651	0.3608	0.8538	0.73	0.87	0.78	0.29	0.7449	0.87	1	T	0.0	B	0.001	B	.	.	1.000	P	-2.71	N	9.04	T	-1.000	T	0.000	T	0.012	-0.688	1.011	3.98	0.447	-0.108	8.636	-0.688012	NA	1	0.747576	0.439532	NA	0.674	NA	8.0953574
843	12	54767812	54767812	G	A	exonic	ZNF385A	NA	synonymous SNV	ZNF385A:NM_015481:exon3:c.C306T:p.D102D,ZNF385A:NM_001130967:exon4:c.C366T:p.D122D,ZNF385A:NM_001130968:exon4:c.C366T:p.D122D	exonic	ENSG00000161642	NA	synonymous SNV	ENSG00000161642:ENST00000550120:exon2:c.C195T:p.D65D,ENSG00000161642:ENST00000394313:exon3:c.C306T:p.D102D,ENSG00000161642:ENST00000549937:exon3:c.C252T:p.D84D,ENSG00000161642:ENST00000549962:exon3:c.C255T:p.D85D,ENSG00000161642:ENST00000550779:exon3:c.C261T:p.D87D,ENSG00000161642:ENST00000551771:exon3:c.C306T:p.D102D,ENSG00000161642:ENST00000338010:exon4:c.C366T:p.D122D,ENSG00000161642:ENST00000352268:exon4:c.C366T:p.D122D,ENSG00000161642:ENST00000546919:exon4:c.C306T:p.D102D,ENSG00000161642:ENST00000547210:exon4:c.C306T:p.D102D,ENSG00000161642:ENST00000550774:exon4:c.C306T:p.D102D,ENSG00000161642:ENST00000551109:exon4:c.C306T:p.D102D,ENSG00000161642:ENST00000546970:exon5:c.C306T:p.D102D	Score=391;Name=lod=52	NA	12q13.13	NA	Name=TCF4	Name=2	NA	rs2887875	0.21	0.21	0.184	0.240016	0.165	0.3075	0.3674	0.1029	0.3425	0.17	0.27	0.32	0.13	0.2296	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.689075	NA	NA	0.178372	0.129369	NA	0.13	NA	8.0936946
843	17	4875628	4875628	A	G	exonic	CAMTA2	NA	nonsynonymous SNV	CAMTA2:NM_001171166:exon15:c.T2713C:p.S905P,CAMTA2:NM_001171168:exon15:c.T2704C:p.S902P,CAMTA2:NM_001171167:exon16:c.T2776C:p.S926P,CAMTA2:NM_015099:exon16:c.T2707C:p.S903P	exonic	ENSG00000108509	NA	nonsynonymous SNV	ENSG00000108509:ENST00000361571:exon15:c.T2704C:p.S902P,ENSG00000108509:ENST00000381311:exon15:c.T2713C:p.S905P,ENSG00000108509:ENST00000348066:exon16:c.T2707C:p.S903P,ENSG00000108509:ENST00000358183:exon16:c.T2707C:p.S903P,ENSG00000108509:ENST00000414043:exon16:c.T2776C:p.S926P,ENSG00000108509:ENST00000572543:exon16:c.T2722C:p.S908P	Score=446;Name=lod=87	NA	17p13.2	NA	NA	NA	NA	rs16942615	0.08	0.08	0.063	0.091254	0.0835	0.0486	0.1326	0.1316	0.0593	0.08	0.05	0.1	0.11	0.0838	0.13	0.83	T	0.001	B	0.0	B	0.230	N	0.420	P	-0.205	N	0.8	T	-1.023	T	0.001	T	0.057	0.039	4.219	0.446	-0.104	-0.137	7.909	0.039495	NA	0.02	0.074302	0.118248	NA	0.181	NA	8.0917314
843	17	78091405	78091405	G	A	exonic	GAA	NA	nonsynonymous SNV	GAA:NM_000152:exon17:c.G2338A:p.V780I,GAA:NM_001079804:exon17:c.G2338A:p.V780I,GAA:NM_001079803:exon18:c.G2338A:p.V780I	exonic	ENSG00000171298	NA	nonsynonymous SNV	ENSG00000171298:ENST00000302262:exon17:c.G2338A:p.V780I,ENSG00000171298:ENST00000390015:exon18:c.G2338A:p.V780I	NA	NA	17q25.3	NA	NA	NA	NA	rs1126690	0.69	0.69	0.712	0.711861	0.7624	0.6498	0.5519	0.7156	0.8323	0.76	0.66	0.57	0.72	0.7296	0.76	0.48	T	0.001	B	0.003	B	0.508	N	1.000	P	0.55	N	-2.58	D	-0.975	T	0.000	T	0.058	-0.878	0.485	-2.09	-0.561	-0.389	5.965	-0.878283	NA	0.49	0.749884	0.700635	NA	0.703	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000078171.2;CLNDSDB=.;CLNDSDBID=.	8.0914494
843	4	39064162	39064162	A	C	exonic	KLHL5	NA	nonsynonymous SNV	KLHL5:NM_015990:exon1:c.A28C:p.I10L,KLHL5:NM_199039:exon1:c.A28C:p.I10L	exonic	ENSG00000109790	NA	nonsynonymous SNV	ENSG00000109790:ENST00000261426:exon1:c.A28C:p.I10L,ENSG00000109790:ENST00000359687:exon1:c.A28C:p.I10L,ENSG00000109790:ENST00000381930:exon1:c.A28C:p.I10L,ENSG00000109790:ENST00000504108:exon1:c.A28C:p.I10L	Score=781;Name=lod=1992	NA	4p14	NA	NA	Name=27	NA	rs2711941	0.76	0.76	0.735	0.736422	0.7465	0.8274	0.7882	0.6104	0.7658	0.75	0.84	0.82	0.63	0.7502	0.84	1	T	0.0	B	0.0	B	0.180	N	0.000	P	0	N	-0.32	T	-0.940	T	0.000	T	0.039	-0.469	1.835	3.13	0.581	0.818	4.554	-0.468826	NA	0.42	0.746977	0.651838	NA	0.601	NA	8.0896564
843	22	42538509	42538509	G	A	ncRNA_exonic	CYP2D7P1	NA	NA	NA	exonic	ENSG00000205702	NA	unknown	UNKNOWN	NA	NA	22q13.2	NA	NA	NA	NA	rs3021081	0.36	0.36	0.07	0.389377	0.2952	0.5694	0.2305	0.4894	0.2781	0.27	0.51	0.3	0.39	0.4495	0.51	0	D	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.940	T	0.000	T	0.119	1.8	11.98	-3.71	-0.757	-1.974	4.537	1.799678	1.799678	NA	NA	NA	NA	NA	NA	8.0886333
843	5	149212471	149212471	G	A	exonic	PPARGC1B	NA	nonsynonymous SNV	PPARGC1B:NM_001172698:exon4:c.G718A:p.V240I,PPARGC1B:NM_001172699:exon4:c.G643A:p.V215I,PPARGC1B:NM_133263:exon5:c.G835A:p.V279I	exonic	ENSG00000155846	NA	nonsynonymous SNV	ENSG00000155846:ENST00000360453:exon4:c.G718A:p.V240I,ENSG00000155846:ENST00000403750:exon4:c.G643A:p.V215I,ENSG00000155846:ENST00000309241:exon5:c.G835A:p.V279I,ENSG00000155846:ENST00000394320:exon5:c.G835A:p.V279I	NA	NA	5q32	NA	NA	NA	NA	rs17572019	0.07	0.07	0.05	0.0658946	0.0805	0.0625	0.1254	0.0242	0.0685	0.07	0.06	0.12	0.02	0.0817	0.12	0.51	T	0.034	B	0.032	B	0.218	N	1.000	P	1.1	L	3.09	T	-0.956	T	0.000	T	0.032	0.142	4.765	-1.71	-0.150	1.132	3.399	0.142296	NA	0.11	0.083391	0.02837	NA	0.065	NA	8.0877424
843	19	39923952	39923952	G	A	exonic	RPS16	NA	synonymous SNV	RPS16:NM_001020:exon5:c.C402T:p.G134G	exonic	ENSG00000105193	NA	synonymous SNV	ENSG00000105193:ENST00000251453:exon5:c.C402T:p.G134G,ENSG00000105193:ENST00000601655:exon5:c.C351T:p.G117G	Score=597;Name=lod=355	NA	19q13.2	Score=846;Name=V$ZID_01	Name=p300,SP1,CTCF_(SC-5916)	NA	NA	rs17627	0.22	0.22	0.227	0.240815	0.1839	0.0764	0.1801	0.4501	0.229	0.19	0.07	0.22	0.45	0.2104	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.381879	NA	NA	0.186628	0.39764	NA	0.232	NA	8.0857386
844	6	26124634	26124634	C	T	exonic	HIST1H2AC	NA	synonymous SNV	HIST1H2AC:NM_003512:exon1:c.C174T:p.Y58Y	exonic	ENSG00000180573	NA	synonymous SNV	ENSG00000180573:ENST00000314088:exon1:c.C174T:p.Y58Y,ENSG00000180573:ENST00000377791:exon1:c.C174T:p.Y58Y,ENSG00000180573:ENST00000602637:exon1:c.C174T:p.Y58Y	Score=713;Name=lod=1051	NA	6p22.2	NA	Name=CCNT2,ELF1_(SC-631),HEY1,ZEB1_(SC-25388),NFKB,PAX5-C20,Pol2,NRSF,Pol2(phosphoS2),HA-E2F1,E2F6,Pol2-4H8,GATA-1,TAF1,E2F4,HMGN3	NA	Score=119;Name=2017010_1_-_119	rs4645	0.1	0.1	0.088	0.0802716	0.2127	0.0139	0.1066	0.0076	0.092	0.22	0.01	0.1	0.01	0.1528	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.616484	1.616484	NA	0.216628	0.047208	NA	0.167	NA	8.0845386
844	7	97488569	97488569	A	T	exonic	ASNS	NA	nonsynonymous SNV	ASNS:NM_001178076:exon3:c.T380A:p.V127E,ASNS:NM_001178077:exon3:c.T380A:p.V127E,ASNS:NM_001178075:exon5:c.T566A:p.V189E,ASNS:NM_001673:exon5:c.T629A:p.V210E,ASNS:NM_133436:exon5:c.T629A:p.V210E,ASNS:NM_183356:exon6:c.T629A:p.V210E	exonic	ENSG00000070669	NA	nonsynonymous SNV	ENSG00000070669:ENST00000437628:exon3:c.T380A:p.V127E,ENSG00000070669:ENST00000455086:exon3:c.T380A:p.V127E,ENSG00000070669:ENST00000422745:exon4:c.T566A:p.V189E,ENSG00000070669:ENST00000454046:exon4:c.T629A:p.V210E,ENSG00000070669:ENST00000394308:exon5:c.T629A:p.V210E,ENSG00000070669:ENST00000394309:exon5:c.T629A:p.V210E,ENSG00000070669:ENST00000442734:exon5:c.T629A:p.V210E,ENSG00000070669:ENST00000444334:exon5:c.T566A:p.V189E,ENSG00000070669:ENST00000175506:exon6:c.T629A:p.V210E	Score=389;Name=lod=51	NA	7q21.3	NA	NA	NA	NA	rs1049674	0.85	0.85	0.852	0.875998	0.7247	0.9137	0.8271	0.9834	0.8824	0.72	0.91	0.83	0.98	0.7948	0.98	0.4	T	0.0	B	0.0	B	0.000	N	0.999	P	-0.805	N	1.05	T	-1.003	T	0.000	T	0.32	-1.303	0.037	3.04	0.636	4.408	6.375	-1.302928	NA	0.27	0.730233	0.938493	NA	0.935	NA	8.0836004
844	6	41029109	41029109	T	C	exonic	APOBEC2	NA	synonymous SNV	APOBEC2:NM_006789:exon2:c.T174C:p.N58N	exonic	ENSG00000124701	NA	synonymous SNV	ENSG00000124701:ENST00000244669:exon2:c.T174C:p.N58N	Score=561;Name=lod=253	NA	6p21.1	Score=809;Name=V$STAT1_01	NA	Name=9	NA	rs2073014	0.17	0.17	0.147	0.184305	0.168	0.2669	0.2305	0.0333	0.2873	0.17	0.25	0.22	0.03	0.2147	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.153838	NA	NA	0.203256	0.070813	NA	0.08	NA	8.0807106
844	19	14580328	14580328	A	G	exonic	PKN1	NA	nonsynonymous SNV	PKN1:NM_002741:exon16:c.A2152G:p.I718V,PKN1:NM_213560:exon16:c.A2170G:p.I724V	exonic	ENSG00000123143	NA	nonsynonymous SNV	ENSG00000123143:ENST00000591461:exon4:c.A364G:p.I122V,ENSG00000123143:ENST00000242783:exon16:c.A2152G:p.I718V,ENSG00000123143:ENST00000342216:exon16:c.A2170G:p.I724V	NA	NA	19p13.12	NA	NA	NA	NA	rs2230539	0.16	0.16	0.159	0.189497	0.0775	0.1052	0.1657	0.4501	0.0562	0.06	0.12	0.15	0.38	0.1094	0.38	1	T	0.0	B	0.0	B	0.025	N	0.000	P	0.505	N	1.89	T	-0.946	T	0.000	T	0.048	-1.986	0.007	-2.14	-0.395	-0.587	8.564	-1.985745	NA	1	0.065833	0.366667	NA	0.203	NA	8.0806004
844	5	1244425	1244425	C	T	exonic	SLC6A18	NA	nonsynonymous SNV	SLC6A18:NM_182632:exon10:c.C1433T:p.P478L	exonic	ENSG00000164363	NA	nonsynonymous SNV	ENSG00000164363:ENST00000296821:exon9:c.C1127T:p.P376L,ENSG00000164363:ENST00000324642:exon10:c.C1433T:p.P478L	Score=284;Name=lod=19	NA	5p15.33	NA	NA	NA	NA	rs4073918	0.67	0.67	0.675	0.676118	0.7744	0.2728	0.696	0.9009	0.6728	0.77	0.28	0.73	0.91	0.7171	0.91	0.66	T	0.001	B	0.001	B	0.022	N	0.779	P	-1.945	N	-0.64	T	-0.959	T	0.000	T	0.183	-0.811	0.647	4.87	0.722	4.148	8.429	-0.810981	NA	0.86	0.76407	0.863141	NA	0.725	NA	8.0777634
844	1	183187603	183187603	C	T	exonic	LAMC2	NA	synonymous SNV	LAMC2:NM_005562:exon4:c.C483T:p.V161V,LAMC2:NM_018891:exon4:c.C483T:p.V161V	exonic	ENSG00000058085	NA	synonymous SNV	ENSG00000058085:ENST00000264144:exon4:c.C483T:p.V161V,ENSG00000058085:ENST00000493293:exon4:c.C483T:p.V161V	Score=484;Name=lod=124	NA	1q25.3	Score=889;Name=V$TGIF_01	NA	Name=19	NA	rs1129723	0.29	0.29	0.273	0.313898	0.1571	0.3333	0.3184	0.4024	0.3323	0.17	0.34	0.29	0.41	0.2566	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.452169	1.452169	NA	0.176512	0.381979	NA	0.232	NA	8.0764546
844	17	55183792	55183792	G	A	exonic	AKAP1	NA	nonsynonymous SNV	AKAP1:NM_003488:exon2:c.G967A:p.G323S,AKAP1:NM_001242902:exon3:c.G967A:p.G323S,AKAP1:NM_001242903:exon3:c.G967A:p.G323S	exonic	ENSG00000121057	NA	nonsynonymous SNV	ENSG00000121057:ENST00000314126:exon2:c.G967A:p.G323S,ENSG00000121057:ENST00000337714:exon2:c.G967A:p.G323S,ENSG00000121057:ENST00000481416:exon2:c.G967A:p.G323S,ENSG00000121057:ENST00000539273:exon2:c.G967A:p.G323S,ENSG00000121057:ENST00000572557:exon2:c.G967A:p.G323S,ENSG00000121057:ENST00000571629:exon3:c.G967A:p.G323S	NA	NA	17q22	NA	NA	NA	NA	rs35359994	0.04	0.04	0.012	0.0483227	0.1133	0.006	0.0432	0.0189	0.0685	0.08	0.01	0.03	0.01	0.0735	0.08	0.32	T	0.023	B	0.004	B	.	.	1.000	N	0	N	2.24	T	-0.977	T	0.001	T	0.082	0.837	8.381	-0.285	0.202	-1.247	3.776	0.837457	NA	0	0.070581	0.018838	NA	NA	NA	8.0759524
844	11	5688940	5688940	C	T	exonic	TRIM5	NA	nonsynonymous SNV	TRIM5:NM_033034:exon5:c.G746A:p.G249D,TRIM5:NM_033092:exon5:c.G746A:p.G249D,TRIM5:NM_033093:exon5:c.G746A:p.G249D	exonic	ENSG00000132256	NA	nonsynonymous SNV	ENSG00000132256:ENST00000380034:exon5:c.G746A:p.G249D,ENSG00000132256:ENST00000396847:exon5:c.G746A:p.G249D,ENSG00000132256:ENST00000396855:exon5:c.G746A:p.G249D,ENSG00000132256:ENST00000380027:exon8:c.G746A:p.G249D	Score=284;Name=lod=19	NA	11p15.4	NA	NA	NA	NA	rs11038628	0.24	0.24	0.24	0.245208	0.0586	0.4256	0.2291	0.3124	0.1718	0.06	0.42	0.2	0.33	0.1411	0.42	1	T	0.001	B	0.003	B	0.000	N	0.000	P	-0.48	N	3.76	T	-0.909	T	0.000	T	0.387	-1.197	0.074	1.31	0.279	-0.094	4.658	-1.197052	NA	1	0.058413	0.254884	NA	0.181	NA	8.0752204
845	14	25102160	25102160	C	T	exonic	GZMB	NA	nonsynonymous SNV	GZMB:NM_004131:exon2:c.G164A:p.R55Q	exonic	ENSG00000100453	NA	nonsynonymous SNV	ENSG00000100453:ENST00000216341:exon2:c.G164A:p.R55Q,ENSG00000100453:ENST00000382540:exon2:c.G164A:p.R55Q,ENSG00000100453:ENST00000382542:exon2:c.G266A:p.R89Q,ENSG00000100453:ENST00000415355:exon2:c.G128A:p.R43Q,ENSG00000100453:ENST00000526004:exon2:c.G164A:p.R55Q,ENSG00000100453:ENST00000554242:exon2:c.G164A:p.R55Q	NA	Name=Vitiligo	14q12	Score=794;Name=V$CDPCR3_01	NA	NA	NA	rs8192917	0.71	0.71	0.685	0.680711	0.7525	0.7133	0.781	0.5605	0.6646	0.75	0.76	0.77	0.58	0.7476	0.77	0.32	T	0.344	B	0.027	B	0.588	N	1.000	P	-0.02	N	1.57	T	-0.938	T	0.000	T	0.137	2.78	15.26	-1.15	-0.100	-1.293	8.534	2.780393	2.780393	0.33	0.763605	0.595098	NA	0.703	NA	8.0696284
845	12	56115585	56115585	C	T	exonic	RDH5	NA	synonymous SNV	RDH5:NM_001199771:exon3:c.C423T:p.I141I,RDH5:NM_002905:exon3:c.C423T:p.I141I	exonic	ENSG00000135437	NA	synonymous SNV	ENSG00000135437:ENST00000257895:exon3:c.C423T:p.I141I,ENSG00000135437:ENST00000547072:exon3:c.C132T:p.I44I,ENSG00000135437:ENST00000548082:exon3:c.C423T:p.I141I,ENSG00000135437:ENST00000552930:exon3:c.C132T:p.I44I	Score=512;Name=lod=160	NA	12q13.2	Score=942;Name=V$AP1FJ_Q2	NA	Name=4	NA	rs3138142	0.11	0.11	0.094	0.152756	0.1899	0.12	0.1023	0.0098	0.3773	0.19	0.08	0.09	0.02	0.1952	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.670467	NA	NA	0.212558	0.049705	NA	0.058	NA	8.0690086
845	2	233274475	233274475	C	A	exonic	ALPPL2	NA	nonsynonymous SNV	ALPPL2:NM_031313:exon11:c.C1492A:p.R498S	exonic	ENSG00000163286	NA	nonsynonymous SNV	ENSG00000163286:ENST00000295453:exon11:c.C1492A:p.R498S	NA	NA	2q37.1	NA	NA	NA	NA	rs56080708	0.11	0.11	0.081	0.0952476	0.0785	0.2133	0.062	0.0514	0.0736	0.08	0.21	0.06	0.06	0.1021	0.21	0.91	T	0.001	B	0.002	B	0.142	N	1.000	P	0	N	-3.7	D	-0.946	T	0.001	T	0.023	-0.769	0.762	1.24	0.233	-0.511	4.207	-0.768825	NA	0.71	0.084434	0.075402	NA	0.036	NA	8.0682994
845	7	99954457	99954457	G	T	intergenic	PMS2P1,PILRB	dist=20527;dist=1169	NA	NA	exonic	ENSG00000121716	NA	synonymous SNV	ENSG00000121716:ENST00000448382:exon5:c.G234T:p.G78G,ENSG00000121716:ENST00000455145:exon5:c.G234T:p.G78G	NA	NA	7q22.1	NA	NA	NA	NA	rs41280971	0.1	0.1	0.106	0.104832	0.1759	0.0278	0.1023	0.1074	0.1094	0.18	0.02	0.1	0.09	0.2568	0.18	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	.	.	.	.	.	-1.141	0.109	-4.37	-1.252	-3.166	0.163	-1.14083	NA	NA	NA	NA	NA	0.123	NA	8.0673
845	7	100468284	100468284	A	G	exonic	TRIP6	NA	synonymous SNV	TRIP6:NM_003302:exon6:c.A918G:p.V306V	exonic	ENSG00000087077	NA	synonymous SNV	ENSG00000087077:ENST00000200457:exon6:c.A918G:p.V306V	Score=577;Name=lod=295	NA	7q22.1	NA	NA	NA	NA	rs1054391	0.57	0.57	0.568	0.560104	0.5149	0.8095	0.6513	0.3585	0.5573	0.51	0.81	0.62	0.36	0.5621	0.81	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.020	T	0.000	T	.	1.551	11.14	4.91	0.806	1.009	8.026	1.5509	1.5509	NA	0.523372	0.396051	ID=COSM1446714;OCCURENCE=1(large_intestine)	0.449	NA	8.0662946
846	10	90356598	90356598	A	G	exonic	LIPJ	NA	nonsynonymous SNV	LIPJ:NM_001010939:exon8:c.A628G:p.I210V	exonic	ENSG00000204022	NA	nonsynonymous SNV	ENSG00000204022:ENST00000371939:exon8:c.A628G:p.I210V	NA	NA	10q23.31	NA	NA	NA	NA	rs1409136	0.88	0.88	0.902	0.892572	0.7505	0.994	0.8487	0.9788	0.8487	0.75	0.99	0.84	0.97	0.7994	0.99	0.27	T	0.0	B	0.008	B	0.161	N	1.000	P	-0.67	N	0.04	T	-0.994	T	0.000	T	0.005	-0.622	1.239	-8.23	-2.506	-6.308	4.417	-0.622008	NA	0.36	0.719325	0.926658	NA	0.877	NA	8.0641084
846	11	60565921	60565921	C	T	exonic	MS4A10	NA	nonsynonymous SNV	MS4A10:NM_206893:exon7:c.C656T:p.P219L	exonic	ENSG00000172689	NA	nonsynonymous SNV	ENSG00000172689:ENST00000308287:exon7:c.C656T:p.P219L	NA	NA	11q12.2	NA	NA	NA	NA	rs12419635	0.05	0.05	0.054	0.0571086	0.0964	0.001	0.0548	0.0666	0.0634	0.09	0.0017	0.06	0.05	0.0771	0.096	0.05	D	0.035	B	0.004	B	.	.	1.000	P	0.55	N	1.86	T	-1.044	T	0.001	T	0.023	0.859	8.476	0.925	0.260	-0.094	4.363	0.858621	NA	0.05	0.096418	0.053563	NA	0.029	NA	8.0634154
846	17	3352309	3352309	T	C	exonic	SPATA22	NA	nonsynonymous SNV	SPATA22:NM_001170696:exon5:c.A335G:p.Q112R,SPATA22:NM_001170695:exon6:c.A464G:p.Q155R,SPATA22:NM_001170697:exon6:c.A464G:p.Q155R,SPATA22:NM_001170698:exon6:c.A464G:p.Q155R,SPATA22:NM_001170699:exon6:c.A464G:p.Q155R,SPATA22:NM_032598:exon6:c.A464G:p.Q155R	exonic	ENSG00000141255	NA	nonsynonymous SNV	ENSG00000141255:ENST00000574797:exon4:c.A251G:p.Q84R,ENSG00000141255:ENST00000355380:exon5:c.A335G:p.Q112R,ENSG00000141255:ENST00000571607:exon5:c.A251G:p.Q84R,ENSG00000141255:ENST00000268981:exon6:c.A464G:p.Q155R,ENSG00000141255:ENST00000397168:exon6:c.A464G:p.Q155R,ENSG00000141255:ENST00000541913:exon6:c.A416G:p.Q139R,ENSG00000141255:ENST00000571553:exon6:c.A251G:p.Q84R,ENSG00000141255:ENST00000572582:exon6:c.A464G:p.Q155R,ENSG00000141255:ENST00000572969:exon6:c.A464G:p.Q155R,ENSG00000141255:ENST00000573128:exon6:c.A464G:p.Q155R,ENSG00000141255:ENST00000574051:exon6:c.A425G:p.Q142R,ENSG00000141255:ENST00000575375:exon6:c.A464G:p.Q155R	NA	NA	17p13.2	Score=861;Name=V$HNF3B_01	NA	NA	NA	rs11556563	0.22	0.22	0.184	0.171526	0.4523	0.002	0.2421	0.0643	0.1524	0.45	0.0035	0.27	0.06	0.3365	0.48	0.15	T	0.95	P	0.623	P	0.031	N	1.000	P	0.805	L	2.18	T	-0.908	T	0.000	T	0.116	0.934	8.804	0.123	0.036	0.202	5.287	0.933511	NA	0.18	0.482791	0.137994	NA	0.13	NA	8.0617424
846	21	47836206	47836206	A	C	exonic	PCNT	NA	nonsynonymous SNV	PCNT:NM_006031:exon30:c.A6374C:p.H2125P	exonic	ENSG00000160299	NA	nonsynonymous SNV	ENSG00000160299:ENST00000359568:exon30:c.A6374C:p.H2125P	NA	NA	21q22.3	NA	NA	NA	NA	rs35978208	0.16	0.16	0.156	0.178315	0.0924	0.005	0.0922	0.4864	0.09	0.1	0.01	0.1	0.47	0.1034	0.47	0.29	T	0.0	B	0.0	B	0.292	N	1.000	P	-1.67	N	5.02	T	-1.046	T	0.000	T	0.043	-1.371	0.026	3.54	0.550	0.331	5.418	-1.371222	NA	0.38	0.075814	0.432819	NA	0.196	NA	8.0617194
846	1	181759657	181759657	G	A	exonic	CACNA1E	NA	nonsynonymous SNV	CACNA1E:NM_001205294:exon43:c.G5806A:p.A1936T,CACNA1E:NM_000721:exon44:c.G5863A:p.A1955T,CACNA1E:NM_001205293:exon44:c.G5863A:p.A1955T	exonic	ENSG00000198216	NA	nonsynonymous SNV	ENSG00000198216:ENST00000358338:exon43:c.G5659A:p.A1887T,ENSG00000198216:ENST00000360108:exon43:c.G5806A:p.A1936T,ENSG00000198216:ENST00000526775:exon43:c.G5806A:p.A1936T,ENSG00000198216:ENST00000357570:exon44:c.G5716A:p.A1906T,ENSG00000198216:ENST00000367567:exon44:c.G4684A:p.A1562T,ENSG00000198216:ENST00000367570:exon44:c.G5863A:p.A1955T,ENSG00000198216:ENST00000367573:exon44:c.G5863A:p.A1955T	NA	NA	1q25.3	Score=766;Name=V$STAT5A_02	NA	NA	NA	rs704326	0.36	0.36	0.348	0.276358	0.4314	0.3879	0.3242	0.1203	0.1789	0.44	0.44	0.38	0.12	0.3859	0.45	0.56	T	0.003	B	0.001	B	0.109	N	1.000	P	-0.345	N	-3.83	D	-0.995	T	0.000	T	0.024	-0.522	1.618	-1.5	-0.148	0.331	11.663	-0.522134	NA	0.74	0.454501	0.1552	NA	0.384	NA	8.0615324
846	14	21770681	21770681	A	G	exonic	RPGRIP1	NA	synonymous SNV	RPGRIP1:NM_020366:exon4:c.A525G:p.P175P	exonic	ENSG00000092200	NA	synonymous SNV	ENSG00000092200:ENST00000206660:exon4:c.A525G:p.P175P,ENSG00000092200:ENST00000400017:exon4:c.A525G:p.P175P,ENSG00000092200:ENST00000556336:exon4:c.A525G:p.P175P,ENSG00000092200:ENST00000557771:exon4:c.A525G:p.P175P	NA	NA	14q11.2	Score=855;Name=V$MZF1_02	Name=GR	NA	NA	rs17792599	0.14	0.14	0.133	0.135383	0.1889	0.0933	0.1527	0.1362	0.1104	0.18	0.08	0.17	0.13	0.2273	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.245205	NA	NA	0.18901	0.12287	NA	0.13	CLINSIG=untested;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000086257.1;CLNDSDB=.;CLNDSDBID=.	8.0614566
846	19	9075565	9075565	C	T	exonic	MUC16	NA	nonsynonymous SNV	MUC16:NM_024690:exon3:c.G11881A:p.E3961K	exonic	ENSG00000181143	NA	nonsynonymous SNV	ENSG00000181143:ENST00000397910:exon3:c.G11881A:p.E3961K	NA	NA	19p13.2	NA	NA	NA	NA	rs17000836	0.16	0.16	0.15	0.159145	0.0845	0.2679	0.1095	0.1725	0.1411	0.09	0.3	0.1	0.15	0.1116	0.3	0	D	0.017	B	0.006	B	.	.	.	.	0.69	N	2.05	T	-0.937	T	0.000	T	0.084	0.325	5.762	-1.97	-0.420	-0.306	5.534	0.325055	NA	0.06	0.076804	0.152972	NA	0.174	NA	8.0604294
846	18	21017835	21017835	C	T	UTR5	TMEM241	NM_032933:c.-19G>A	NA	NA	UTR5	ENSG00000134490	ENST00000450466:c.-61025G>A,ENST00000581444:c.-19G>A,ENST00000473688:c.-19G>A,ENST00000477053:c.-19G>A,ENST00000383233:c.-19G>A,ENST00000460322:c.-19G>A,ENST00000578520:c.-19G>A,ENST00000482411:c.-19G>A,ENST00000497608:c.-19G>A,ENST00000582336:c.-19G>A,ENST00000580025:c.-19G>A,ENST00000399707:c.-19G>A	NA	NA	NA	NA	18q11.2	NA	Name=E2F6,USF1_(SC-8983),Pol2,ATF3,SP1,USF2,HMGN3,TAF1,E2F6_(H-50),ELF1_(SC-631),Max,KAP1,ZNF263,c-Fos,Pol2-4H8,Sin3Ak-20,Ini1,IRF1,USF-1,ZEB1_(SC-25388),HEY1	Name=143	NA	rs12967028	0.11	0.11	NA	0.0946486	0.1501	0.003	0.111	0.1135	0.0951	0.15	0.01	0.15	0.14	0.1236	0.15	0	D	.	.	.	.	.	.	1.000	P	.	.	.	.	-1.028	T	0.001	T	.	1.204	9.892	-1.3	-0.137	0.533	5.964	1.204423	NA	NA	NA	NA	NA	NA	NA	8.0596334
846	14	23282110	23282110	A	G	exonic	SLC7A7	NA	synonymous SNV	SLC7A7:NM_001126105:exon3:c.T498C:p.I166I,SLC7A7:NM_001126106:exon3:c.T498C:p.I166I	exonic	ENSG00000155465	NA	synonymous SNV	ENSG00000155465:ENST00000397529:exon2:c.T498C:p.I166I,ENSG00000155465:ENST00000397532:exon2:c.T498C:p.I166I,ENSG00000155465:ENST00000556287:exon2:c.T498C:p.I166I,ENSG00000155465:ENST00000285850:exon3:c.T498C:p.I166I,ENSG00000155465:ENST00000397528:exon3:c.T498C:p.I166I,ENSG00000155465:ENST00000555702:exon3:c.T498C:p.I166I	Score=538;Name=lod=204	NA	14q11.2	Score=870;Name=V$NCX_01	Name=NRSF,Rad21,CTCF,CTCF_(SC-5916),CTCF_(C-20)	Name=7	NA	rs8018462	0.61	0.61	0.583	0.582069	0.5189	0.7847	0.6758	0.4939	0.4908	0.52	0.79	0.67	0.48	0.5603	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.713081	2.713081	NA	0.528308	0.466591	NA	0.399	NA	8.0591586
846	17	1183464	1183464	A	G	exonic	TUSC5	NA	nonsynonymous SNV	TUSC5:NM_172367:exon1:c.A169G:p.S57G	exonic	ENSG00000184811	NA	nonsynonymous SNV	ENSG00000184811:ENST00000333813:exon1:c.A169G:p.S57G	Score=457;Name=lod=96	NA	17p13.3	NA	NA	NA	NA	rs6502776	0.79	0.79	0.755	0.780152	0.7495	0.8671	0.8761	0.6989	0.7638	0.74	0.9	0.85	0.68	0.7738	0.9	1	T	0.0	B	0.0	B	0.000	N	0.999	P	-2.255	N	0.06	T	-0.950	T	0.000	T	0.02	-0.379	2.217	4.41	0.680	3.482	9.698	-0.379221	NA	1	0.752721	0.719456	NA	0.761	NA	8.0573124
846	10	105363289	105363289	T	C	exonic	SH3PXD2A	NA	synonymous SNV	SH3PXD2A:NM_014631:exon14:c.A1602G:p.A534A	exonic	ENSG00000107957	NA	synonymous SNV	ENSG00000107957:ENST00000538130:exon9:c.A1191G:p.A397A,ENSG00000107957:ENST00000540321:exon9:c.A1287G:p.A429A,ENSG00000107957:ENST00000355946:exon14:c.A1602G:p.A534A,ENSG00000107957:ENST00000369774:exon15:c.A1686G:p.A562A	Score=433;Name=lod=77	NA	10q24.33	NA	NA	NA	NA	rs3740471	0.15	0.15	0.138	0.135583	0.1998	0.1548	0.1628	0.0643	0.1268	0.21	0.17	0.15	0.04	0.1867	0.22	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.021	T	0.000	T	.	-0.959	0.325	1.31	0.211	1.815	2.762	-0.959357	NA	NA	0.223488	0.088289	NA	0.232	NA	8.0566786
846	19	9082514	9082514	C	A	exonic	MUC16	NA	nonsynonymous SNV	MUC16:NM_024690:exon1:c.G9301T:p.A3101S	exonic	ENSG00000181143	NA	nonsynonymous SNV	ENSG00000181143:ENST00000397910:exon1:c.G9301T:p.A3101S	NA	NA	19p13.2	NA	NA	NA	NA	rs17000871	0.16	0.16	0.157	0.172324	0.0855	0.2292	0.1167	0.2496	0.138	0.09	0.26	0.11	0.22	0.1152	0.26	0	D	0.026	B	0.012	B	.	.	.	.	0	N	4.22	T	-0.890	T	0.000	T	0.03	-0.922	0.394	-1.08	-2.646	-0.707	.	-0.922017	NA	0.16	0.076488	0.215711	NA	0.167	NA	8.0561454
847	3	183756702	183756702	G	A	exonic	HTR3D	NA	nonsynonymous SNV	HTR3D:NM_182537:exon6:c.G779A:p.R260H,HTR3D:NM_001145143:exon8:c.G1154A:p.R385H,HTR3D:NM_001163646:exon8:c.G1304A:p.R435H	exonic	ENSG00000186090	NA	nonsynonymous SNV	ENSG00000186090:ENST00000453435:exon4:c.G641A:p.R214H,ENSG00000186090:ENST00000334128:exon6:c.G779A:p.R260H,ENSG00000186090:ENST00000382489:exon8:c.G1304A:p.R435H,ENSG00000186090:ENST00000428798:exon8:c.G1154A:p.R385H	NA	NA	3q27.1	NA	NA	NA	NA	rs6789754	0.68	0.68	0.713	0.678514	0.5905	0.754	0.6455	0.8351	0.5031	0.59	0.75	0.6	0.8	0.6006	0.8	0.3	T	0.796	P	0.16	B	0.656	N	1.000	P	1.67	L	-1.55	D	-0.916	T	0.000	T	0.211	1.629	11.41	1.16	0.107	2.087	4.145	1.629459	1.629459	0.17	0.587326	0.783704	NA	0.768	NA	8.0549074
847	21	42812891	42812891	C	T	exonic	MX1	NA	synonymous SNV	MX1:NM_001178046:exon7:c.C669T:p.I223I,MX1:NM_002462:exon9:c.C669T:p.I223I,MX1:NM_001144925:exon11:c.C669T:p.I223I	exonic	ENSG00000157601	NA	synonymous SNV	ENSG00000157601:ENST00000288383:exon5:c.C600T:p.I200I,ENSG00000157601:ENST00000455164:exon7:c.C669T:p.I223I,ENSG00000157601:ENST00000398598:exon9:c.C669T:p.I223I,ENSG00000157601:ENST00000398600:exon11:c.C669T:p.I223I	Score=474;Name=lod=113	NA	21q22.3	Score=807;Name=V$FREAC4_01	NA	Name=2	Score=97;Name=1472299_0_+_97	rs467960	0.36	0.36	0.357	0.354832	0.5706	0.1062	0.4424	0.3313	0.3589	0.55	0.08	0.46	0.34	0.4654	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.572954	1.572954	NA	0.576163	0.348616	NA	0.399	NA	8.0545036
847	16	25137449	25137449	A	T	intronic	LCMT1	NA	NA	NA	splicing	ENSG00000205629	ENST00000380962:exon2:c.276+2A>T	NA	NA	NA	NA	16p12.1	NA	NA	NA	NA	rs7188975	NA	NA	0.377	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4486	0.39	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	.	.	.	.	.	-0.877	0.487	-3.05	-1.380	-1.594	0.690	-0.877199	NA	NA	NA	NA	NA	0.391	NA	8.0514
847	2	219555262	219555262	G	A	exonic	STK36	NA	nonsynonymous SNV	STK36:NM_001243313:exon14:c.G1748A:p.R583Q,STK36:NM_015690:exon14:c.G1748A:p.R583Q	exonic	ENSG00000163482	NA	nonsynonymous SNV	ENSG00000163482:ENST00000295709:exon14:c.G1748A:p.R583Q,ENSG00000163482:ENST00000392105:exon14:c.G1748A:p.R583Q,ENSG00000163482:ENST00000392106:exon14:c.G1748A:p.R583Q,ENSG00000163482:ENST00000440309:exon14:c.G1748A:p.R583Q	NA	NA	2q35	NA	NA	NA	NA	rs1344642	0.42	0.42	0.458	0.421725	0.4235	0.1429	0.4107	0.7095	0.3262	0.41	0.16	0.4	0.75	0.4195	0.75	0.25	T	0.145	B	0.008	B	0.120	N	1.000	P	0.345	N	0.56	T	-0.952	T	0.000	T	0.111	1.27	10.15	2.42	0.356	1.646	8.023	1.270143	1.270143	0.16	0.438953	0.636405	NA	0.543	NA	8.0513804
847	6	54173413	54173413	A	G	exonic	TINAG	NA	nonsynonymous SNV	TINAG:NM_014464:exon1:c.A65G:p.Q22R	exonic	ENSG00000137251	NA	nonsynonymous SNV	ENSG00000137251:ENST00000259782:exon1:c.A65G:p.Q22R,ENSG00000137251:ENST00000370864:exon1:c.A11G:p.Q4R,ENSG00000137251:ENST00000370869:exon2:c.A53G:p.Q18R	NA	NA	6p12.1	NA	NA	NA	NA	rs2297980	0.07	0.07	0.057	0.0609026	0.0905	0.005	0.0418	0.0961	0.0542	0.09	0.01	0.06	0.1	0.0868	0.11	0.93	T	0.0	B	0.002	B	0.247	N	1.000	P	1.645	L	1.99	T	-1.097	T	0.050	T	0.032	0.488	6.649	-4.04	-0.930	0.141	3.715	0.488254	NA	0.49	0.10593	0.103041	NA	0.065	NA	8.0501034
847	16	19547503	19547503	C	T	exonic	CCP110	NA	nonsynonymous SNV	CCP110:NM_001199022:exon4:c.C512T:p.P171L,CCP110:NM_014711:exon5:c.C512T:p.P171L	exonic	ENSG00000103540	NA	nonsynonymous SNV	ENSG00000103540:ENST00000561888:exon2:c.C344T:p.P115L,ENSG00000103540:ENST00000381396:exon4:c.C512T:p.P171L,ENSG00000103540:ENST00000396208:exon4:c.C512T:p.P171L,ENSG00000103540:ENST00000396212:exon5:c.C512T:p.P171L	NA	NA	16p12.3	NA	NA	NA	NA	rs3751821	0.24	0.24	0.239	0.240216	0.0755	0.3849	0.2579	0.3313	0.1247	0.07	0.38	0.21	0.36	0.1422	0.38	0.29	T	0.0	B	0.001	B	0.493	N	1.000	P	-1.245	N	2.58	T	-0.916	T	0.000	T	0.033	-0.899	0.441	-2.28	-0.069	-0.239	7.364	-0.898743	NA	1	0.065698	0.288803	ID=COSM148033;OCCURENCE=1(stomach)	0.21	NA	8.0499354
847	10	26463043	26463043	A	T	exonic	MYO3A	NA	nonsynonymous SNV	MYO3A:NM_017433:exon30:c.A3850T:p.T1284S	exonic	ENSG00000095777	NA	nonsynonymous SNV	ENSG00000095777:ENST00000265944:exon30:c.A3850T:p.T1284S	NA	NA	10p12.1	NA	NA	NA	NA	rs3740231	0.38	0.38	0.378	0.380591	0.4394	0.3542	0.3746	0.3003	0.4601	0.45	0.38	0.34	0.32	0.4145	0.45	0.8	T	0.003	B	0.002	B	0.341	N	1.000	P	0.895	L	-1.11	T	-1.020	T	0.000	T	0.018	0.846	8.417	-3.44	-0.458	0.368	2.716	0.84553	NA	0.35	0.429535	0.329097	ID=COSM146912;OCCURENCE=1(stomach)	0.399	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000039036.1;CLNDSDB=.;CLNDSDBID=.	8.0498984
847	7	133906669	133906669	C	T	exonic	LRGUK	NA	nonsynonymous SNV	LRGUK:NM_144648:exon16:c.C1982T:p.A661V	exonic	ENSG00000155530	NA	nonsynonymous SNV	ENSG00000155530:ENST00000285928:exon16:c.C1982T:p.A661V	Score=361;Name=lod=39	NA	7q33	NA	NA	NA	NA	rs35149449	0.14	0.14	0.13	0.133986	0.0706	0.3839	0.1297	0.0061	0.1176	0.06	0.37	0.13	0.02	0.1214	0.37	1	T	0.002	B	0.0	B	0.162	N	0.992	P	-1.15	N	1.76	T	-0.919	T	0.000	T	0.035	-1.5	0.017	0.667	0.044	-0.101	7.685	-1.500426	NA	1	0.092907	0.022923	NA	0.08	NA	8.0484264
847	14	20404736	20404736	G	A	exonic	OR4K1	NA	nonsynonymous SNV	OR4K1:NM_001004063:exon1:c.G911A:p.R304H	exonic	ENSG00000155249	NA	nonsynonymous SNV	ENSG00000155249:ENST00000285600:exon1:c.G911A:p.R304H	NA	NA	14q11.2	NA	NA	NA	NA	rs2792146	0.44	0.44	0.432	0.429513	0.4294	0.6101	0.4669	0.2617	0.4438	0.41	0.61	0.46	0.28	0.4454	0.61	0.22	T	0.003	B	0.001	B	0.250	N	1.000	P	1.16	L	1.07	T	-0.936	T	0.000	T	0.066	-0.48	1.788	-4.59	-0.902	-1.082	8.691	-0.480168	NA	0.29	0.410698	0.289378	NA	0.283	NA	8.0478354
847	2	241405485	241405485	C	T	exonic	GPC1	NA	synonymous SNV	GPC1:NM_002081:exon9:c.C1455T:p.G485G	exonic	ENSG00000063660	NA	synonymous SNV	ENSG00000063660:ENST00000264039:exon9:c.C1455T:p.G485G	Score=469;Name=lod=107	NA	2q37.3	NA	NA	NA	NA	rs2228330	0.14	0.14	0.139	0.145168	0.2107	0.0149	0.134	0.1755	0.1789	0.21	0.01	0.14	0.17	0.182	0.23	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	0.611	7.291	2.77	0.610	0.518	10.396	0.611022	NA	NA	0.226583	0.172744	NA	0.058	NA	8.0473836
847	15	55912875	55912875	T	A	exonic	PRTG	NA	nonsynonymous SNV	PRTG:NM_173814:exon19:c.A3184T:p.I1062L	exonic	ENSG00000166450	NA	nonsynonymous SNV	ENSG00000166450:ENST00000389286:exon19:c.A3184T:p.I1062L	NA	NA	15q21.3	NA	NA	NA	NA	rs1438914	0.05	0.05	0.034	0.0365415	0.1093	NA	0.0519	0.0023	0.0348	0.11	NA	0.06	0.0041	0.0734	0.11	0.25	T	0.0	B	0.0	B	0.981	N	0.672	D	0.69	N	0.79	T	-1.000	T	0.002	T	0.023	1.305	10.27	0.324	0.114	0.326	1.902	1.305246	1.305246	0.53	0.104244	0.025862	NA	0.08	NA	8.0463894
847	12	66546100	66546100	A	G	exonic	TMBIM4	NA	nonsynonymous SNV	TMBIM4:NM_016056:exon3:c.T263C:p.I88T	exonic	ENSG00000155957,ENSG00000228144	NA	nonsynonymous SNV	ENSG00000155957:ENST00000358230:exon3:c.T263C:p.I88T,ENSG00000155957:ENST00000398033:exon3:c.T263C:p.I88T,ENSG00000228144:ENST00000539652:exon3:c.T263C:p.I88T,ENSG00000155957:ENST00000542724:exon3:c.T170C:p.I57T,ENSG00000155957:ENST00000556010:exon3:c.T263C:p.I88T,ENSG00000155957:ENST00000286424:exon4:c.T404C:p.I135T	NA	NA	12q14.3	NA	NA	NA	NA	rs8793	0.47	0.47	0.44	0.470447	0.4175	0.8839	0.245	0.2496	0.5573	0.41	0.88	0.27	0.24	0.4472	0.88	.	.	0.001	B	0.003	B	0.000	N	0.000	P	-0.59	N	0.84	T	-1.009	T	0.000	T	0.058	0.072	4.389	2.64	0.413	1.350	8.127	0.071874	NA	0.41	0.422954	0.289918	NA	0.435	NA	8.0456794
848	17	41004637	41004637	G	A	exonic	AOC3	NA	nonsynonymous SNV	AOC3:NM_001277731:exon1:c.G1277A:p.R426H,AOC3:NM_003734:exon1:c.G1277A:p.R426H	exonic	ENSG00000131471	NA	nonsynonymous SNV	ENSG00000131471:ENST00000308423:exon1:c.G1277A:p.R426H	NA	NA	17q21.31	NA	NA	NA	NA	rs33986943	0.05	0.05	0.056	0.0483227	0.1123	NA	0.0548	0.0091	0.0808	0.11	NA	0.06	0.02	0.0745	0.11	0.15	T	0.021	B	0.004	B	0.331	N	1.000	N	0.345	N	3.73	T	-0.941	T	0.000	T	0.049	0.627	7.371	-3.71	-0.747	-0.172	8.499	0.626759	NA	0.22	0.101628	0.021562	NA	0.109	NA	8.0449054
848	14	104559852	104559852	T	C	exonic	ASPG	NA	synonymous SNV	ASPG:NM_001080464:exon3:c.T216C:p.I72I	exonic	ENSG00000166183	NA	synonymous SNV	ENSG00000166183:ENST00000455920:exon3:c.T216C:p.I72I,ENSG00000166183:ENST00000546892:exon3:c.T216C:p.I72I,ENSG00000166183:ENST00000551177:exon3:c.T216C:p.I72I	Score=383;Name=lod=48	NA	14q32.33	Score=714;Name=V$NRSF_01	NA	NA	NA	rs941953	0.36	0.36	0.376	0.41274	0.1809	0.3869	0.3314	0.6823	0.3712	0.17	0.38	0.35	0.64	0.2721	0.64	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.960	T	0.000	T	.	-0.255	2.774	1.64	0.172	-0.340	3.867	-0.255089	NA	NA	0.168817	0.551524	NA	0.138	NA	8.0448496
848	1	109735416	109735416	A	C	exonic	KIAA1324	NA	nonsynonymous SNV	KIAA1324:NM_001267049:exon6:c.A817C:p.T273P,KIAA1324:NM_001267048:exon12:c.A1606C:p.T536P,KIAA1324:NM_020775:exon14:c.A1867C:p.T623P	exonic	ENSG00000116299	NA	nonsynonymous SNV	ENSG00000116299:ENST00000529753:exon12:c.A1606C:p.T536P,ENSG00000116299:ENST00000457623:exon13:c.A1717C:p.T573P,ENSG00000116299:ENST00000369939:exon14:c.A1867C:p.T623P	NA	NA	1p13.3	NA	NA	NA	NA	rs659543	0.75	0.75	0.718	0.740016	0.7565	0.998	0.8055	0.3593	0.9254	0.78	1	0.8	0.39	0.7829	1	1	T	0.0	B	0.0	B	0.368	N	1.000	P	-1.7	N	0.05	T	-0.993	T	0.009	T	0.418	-1.555	0.015	-7.86	-1.323	-1.790	1.863	-1.555217	NA	1	0.751279	0.411938	NA	0.768	NA	8.0426544
848	19	17170885	17170885	C	T	exonic	HAUS8	NA	nonsynonymous SNV	HAUS8:NM_001011699:exon5:c.G244A:p.G82R,HAUS8:NM_033417:exon5:c.G247A:p.G83R	exonic	ENSG00000131351	NA	nonsynonymous SNV	ENSG00000131351:ENST00000593360:exon4:c.G64A:p.G22R,ENSG00000131351:ENST00000253669:exon5:c.G247A:p.G83R,ENSG00000131351:ENST00000448593:exon5:c.G244A:p.G82R	NA	NA	19p13.11	NA	NA	NA	NA	rs1130222	0.43	0.43	0.394	0.471246	0.3996	0.4058	0.5187	0.4539	0.6022	0.39	0.42	0.48	0.47	0.4658	0.53	0.05	D	0.062	B	0.005	B	0.392	N	1.000	P	1.735	L	1.0	T	-0.949	T	0.000	T	0.058	2.525	14.4	1.07	0.427	1.777	5.928	2.524794	2.524794	0.05	0.425698	0.444848	NA	0.478	NA	8.0422354
848	11	4928621	4928621	G	A	exonic	OR51A7	NA	nonsynonymous SNV	OR51A7:NM_001004749:exon1:c.G22A:p.E8K	exonic	ENSG00000176895	NA	nonsynonymous SNV	ENSG00000176895:ENST00000359350:exon1:c.G22A:p.E8K	NA	NA	11p15.4	NA	NA	NA	NA	rs11034596	0.22	0.22	0.201	0.179912	0.0835	0.5427	0.1527	0.0703	0.0726	0.09	0.54	0.13	0.09	0.1304	0.54	0.62	T	0.023	B	0.014	B	0.038	N	1.000	P	1.415	L	2.16	T	-0.948	T	0.000	T	0.118	-0.495	1.727	3.15	0.318	-0.435	10.681	-0.495119	NA	0.24	0.077711	0.079055	ID=COSM147112;OCCURENCE=1(stomach)	0.08	NA	8.0417224
848	1	35259946	35259946	G	A	exonic	GJA4	NA	synonymous SNV	GJA4:NM_002060:exon2:c.G132A:p.V44V	exonic	ENSG00000187513	NA	synonymous SNV	ENSG00000187513:ENST00000342280:exon2:c.G132A:p.V44V,ENSG00000187513:ENST00000450137:exon2:c.G132A:p.V44V	Score=506;Name=lod=152	NA	1p34.3	Score=910;Name=V$SREBP1_02	NA	Name=17	NA	rs1764389	0.24	0.24	0.257	0.236022	0.2197	0.1349	0.1614	0.4796	0.0808	0.22	0.14	0.19	0.44	0.2044	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.322696	NA	NA	0.201512	0.435089	ID=COSM146462;OCCURENCE=1(stomach)	0.225	NA	8.0410546
848	2	207169731	207169731	G	A	exonic	ZDBF2	NA	nonsynonymous SNV	ZDBF2:NM_020923:exon5:c.G479A:p.R160K	exonic	ENSG00000204186	NA	nonsynonymous SNV	ENSG00000204186:ENST00000374423:exon5:c.G479A:p.R160K	NA	NA	2q33.3	NA	NA	NA	NA	rs10932150	0.4	0.4	0.384	0.405551	0.4304	0.1954	0.5086	0.4818	0.4202	0.44	0.19	0.51	0.5	0.4133	0.51	1	T	0.0	B	0.0	B	0.152	N	1.000	P	-1.445	N	2.42	T	-0.912	T	0.000	T	0.037	-0.614	1.267	2.59	-0.016	1.264	7.758	-0.614036	NA	1	0.45116	0.480249	NA	0.362	NA	8.0384734
848	15	45491136	45491136	C	G	exonic	SHF	NA	nonsynonymous SNV	SHF:NM_138356:exon2:c.G137C:p.W46S	exonic	ENSG00000138606	NA	nonsynonymous SNV	ENSG00000138606:ENST00000290894:exon2:c.G137C:p.W46S,ENSG00000138606:ENST00000318390:exon2:c.G308C:p.W103S	NA	NA	15q21.1	NA	Name=NRSF,Pol2,GABP,Znf143_(16618-1-AP),ETS1,TAF1,GATA-1,EBF1_(C-8),CTCF,Rad21,Pol2-4H8,ZNF263,CTCF_(SC-5916),TFIIIC-110,Nrf1,HEY1,NFKB,AP-2gamma	NA	NA	rs62026667	0.05	0.05	0.048	0.0395367	0.1143	0.001	0.062	0.003	0.0358	0.11	NA	0.06	0.002	0.0794	0.11	0.44	T	0.001	B	0.001	B	0.000	N	1.000	P	0.69	N	1.47	T	-1.094	T	0.002	T	0.158	2.45	14.15	0.306	0.084	-0.056	2.002	2.450179	2.450179	0	0.102087	0.020728	NA	0.022	NA	8.0375464
848	19	43371294	43371294	C	A	exonic	PSG1	NA	nonsynonymous SNV	PSG1:NM_001184825:exon6:c.G1252T:p.V418F	exonic	ENSG00000231924	NA	nonsynonymous SNV	ENSG00000231924:ENST00000403380:exon5:c.G973T:p.V325F,ENSG00000231924:ENST00000436291:exon6:c.G1252T:p.V418F	NA	NA	19q13.2	NA	NA	NA	NA	rs2353115	NA	NA	NA	0.287939	0.1083	0.4167	0.196	0.3124	0.3722	NA	NA	NA	NA	0.1893	NA	0.07	T	0.061	B	0.093	B	.	.	1.000	N	0.695	N	5.77	T	-1.012	T	0.045	T	0.338	-0.162	3.209	.	-2.143	-0.992	.	-0.162011	NA	0.01	NA	NA	NA	NA	NA	8.0357334
848	15	59323048	59323048	C	G	exonic	RNF111	NA	nonsynonymous SNV	RNF111:NM_001270528:exon2:c.C27G:p.N9K,RNF111:NM_001270529:exon2:c.C27G:p.N9K,RNF111:NM_001270530:exon2:c.C27G:p.N9K,RNF111:NM_017610:exon2:c.C27G:p.N9K	exonic	ENSG00000157450	NA	nonsynonymous SNV	ENSG00000157450:ENST00000561186:exon1:c.C27G:p.N9K,ENSG00000157450:ENST00000348370:exon2:c.C27G:p.N9K,ENSG00000157450:ENST00000434298:exon2:c.C27G:p.N9K,ENSG00000157450:ENST00000557998:exon2:c.C27G:p.N9K,ENSG00000157450:ENST00000559209:exon2:c.C27G:p.N9K,ENSG00000157450:ENST00000559757:exon2:c.C27G:p.N9K,ENSG00000157450:ENST00000559160:exon3:c.C96G:p.N32K	Score=613;Name=lod=412	NA	15q22.2	NA	NA	NA	NA	rs2899642	0.26	0.26	0.24	0.231629	0.4781	0.1399	0.2925	0.0212	0.3139	0.46	0.12	0.35	0.03	0.3659	0.46	0.06	T	0.369	B	0.197	B	0.000	N	0.983	P	1.1	L	2.31	T	-0.913	T	0.000	T	0.104	1.548	11.13	3.7	0.716	0.738	5.948	1.548288	1.548288	0.08	0.45409	0.089457	NA	0.304	NA	8.0352434
849	6	147680359	147680359	A	G	exonic	STXBP5	NA	synonymous SNV	STXBP5:NM_139244:exon21:c.A2337G:p.L779L,STXBP5:NM_001127715:exon23:c.A2445G:p.L815L	exonic	ENSG00000164506	NA	synonymous SNV	ENSG00000164506:ENST00000392291:exon5:c.A417G:p.L139L,ENSG00000164506:ENST00000367480:exon20:c.A2286G:p.L762L,ENSG00000164506:ENST00000367481:exon21:c.A2337G:p.L779L,ENSG00000164506:ENST00000179882:exon22:c.A1410G:p.L470L,ENSG00000164506:ENST00000321680:exon23:c.A2445G:p.L815L	Score=420;Name=lod=68	Name=Coagulation factor levels	6q24.3	NA	NA	NA	NA	rs9390459	0.48	0.48	0.493	0.504193	0.5388	0.2907	0.5605	0.5726	0.5562	0.55	0.3	0.53	0.56	0.5326	0.56	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.949	T	0.074	T	.	0.133	4.718	-10.9	-2.482	-0.110	17.672	0.13346	NA	NA	0.560349	0.564911	NA	0.464	NA	8.0349176
849	6	42932200	42932200	G	T	exonic	PEX6	NA	nonsynonymous SNV	PEX6:NM_000287:exon17:c.C2816A:p.P939Q	exonic	ENSG00000124587	NA	nonsynonymous SNV	ENSG00000124587:ENST00000304611:exon17:c.C2816A:p.P939Q	NA	NA	6p21.1	NA	NA	NA	NA	rs1129187	0.33	0.33	0.332	0.33147	0.4622	0.1012	0.3516	0.3699	0.3681	0.46	0.12	0.36	0.34	0.3911	0.46	0.19	T	0.004	B	0.006	B	0.945	N	0.000	P	1.52	L	-3.51	D	-0.651	T	0.497	T	0.032	1.964	12.52	0.549	-0.182	0.232	2.591	1.963729	1.963729	0.14	0.445581	0.390377	ID=COSM1444600;OCCURENCE=1(large_intestine)	NA	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000078574.1;CLNDSDB=.;CLNDSDBID=.	8.0344524
849	17	38062196	38062196	G	A	exonic	GSDMB	NA	nonsynonymous SNV	GSDMB:NM_018530:exon6:c.C865T:p.P289S,GSDMB:NM_001042471:exon8:c.C892T:p.P298S,GSDMB:NM_001165959:exon8:c.C904T:p.P302S,GSDMB:NM_001165958:exon9:c.C931T:p.P311S	exonic	ENSG00000073605	NA	nonsynonymous SNV	ENSG00000073605:ENST00000394175:exon6:c.C865T:p.P289S,ENSG00000073605:ENST00000309481:exon8:c.C892T:p.P298S,ENSG00000073605:ENST00000360317:exon8:c.C931T:p.P311S,ENSG00000073605:ENST00000394179:exon8:c.C916T:p.P306S,ENSG00000073605:ENST00000520542:exon8:c.C904T:p.P302S,ENSG00000073605:ENST00000418519:exon9:c.C931T:p.P311S	NA	Name=Asthma,Ulcerative colitis	17q12	NA	NA	NA	NA	rs2305480	0.33	0.33	0.304	0.286741	0.4662	0.2817	0.3357	0.1074	0.3149	0.47	0.31	0.35	0.11	0.39	0.47	0.57	T	0.877	P	0.675	P	0.034	N	1.000	P	1.155	L	1.6	T	-0.950	T	0.000	T	0.088	-0.718	0.915	0.469	0.325	0.422	5.491	-0.717902	NA	0.2	0.442791	0.146845	ID=COSM148261;OCCURENCE=1(stomach)	0.312	NA	8.0343424
849	21	19670118	19670118	G	A	exonic	TMPRSS15	NA	nonsynonymous SNV	TMPRSS15:NM_002772:exon19:c.C2194T:p.P732S	exonic	ENSG00000154646	NA	nonsynonymous SNV	ENSG00000154646:ENST00000284885:exon19:c.C2194T:p.P732S	NA	NA	21q21.1	NA	NA	NA	NA	rs2824721	0.7	0.7	0.691	0.700879	0.7624	0.6389	0.7205	0.6687	0.7311	0.77	0.65	0.74	0.65	0.7543	0.78	.	.	0.0	B	0.0	B	0.010	N	1.000	P	-2.125	N	0.86	T	-0.962	T	0.000	T	0.185	-1.952	0.007	5.67	0.980	1.914	8.62	-1.952366	NA	0.89	0.783023	0.705402	NA	0.71	NA	8.0336104
849	11	5153261	5153261	A	G	exonic	OR52A5	NA	synonymous SNV	OR52A5:NM_001005160:exon1:c.T612C:p.F204F	exonic	ENSG00000171944	NA	synonymous SNV	ENSG00000171944:ENST00000307388:exon1:c.T612C:p.F204F	NA	NA	11p15.4	Score=868;Name=V$RFX1_02	Name=TAL1_(SC-12984),Pol2(b),c-Jun,GATA-2,Pol2-4H8,CCNT2,c-Myc,eGFP-GATA2,GATA2_(CG2-96),E2F6_(H-50),TAF1,E2F6,eGFP-JunD,NRSF,Max,CEBPB	Name=2	NA	rs2472530	0.22	0.22	0.2	0.198682	0.2028	0.3929	0.232	0.0144	0.2198	0.22	0.39	0.23	0.02	0.2196	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.078323	NA	NA	0.212075	0.049977	NA	0.145	NA	8.0321916
849	11	119216279	119216279	G	A	exonic	MFRP	NA	synonymous SNV	MFRP:NM_031433:exon5:c.C492T:p.Y164Y	exonic	ENSG00000235718,ENSG00000259159	NA	synonymous SNV	ENSG00000235718:ENST00000360167:exon5:c.C492T:p.Y164Y,ENSG00000235718:ENST00000449574:exon5:c.C492T:p.Y164Y,ENSG00000259159:ENST00000530681:exon5:c.C492T:p.Y164Y,ENSG00000235718:ENST00000555262:exon5:c.C492T:p.Y164Y	Score=552;Name=lod=233	NA	11q23.3	Score=875;Name=V$SPZ1_01	NA	NA	NA	rs36015759	0.2	0.2	0.184	0.201478	0.2028	0.2024	0.1657	0.2489	0.1605	0.21	0.19	0.18	0.23	0.2136	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.528382	NA	NA	0.219441	0.236016	NA	0.196	CLINSIG=probable-non-pathogenic;CLNDBN=not_provided;CLNREVSTAT=single;CLNACC=RCV000132684.1;CLNDSDB=.;CLNDSDBID=.	8.0308256
849	2	166003479	166003479	G	A	exonic	SCN3A	NA	synonymous SNV	SCN3A:NM_001081676:exon12:c.C1441T:p.L481L,SCN3A:NM_001081677:exon12:c.C1441T:p.L481L,SCN3A:NM_006922:exon12:c.C1441T:p.L481L	exonic	ENSG00000153253	NA	synonymous SNV	ENSG00000153253:ENST00000440431:exon11:c.C1441T:p.L481L,ENSG00000153253:ENST00000283254:exon12:c.C1441T:p.L481L,ENSG00000153253:ENST00000360093:exon12:c.C1441T:p.L481L,ENSG00000153253:ENST00000409101:exon12:c.C1441T:p.L481L	Score=491;Name=lod=132	NA	2q24.3	NA	NA	Name=2	NA	rs16850131	0.26	0.26	0.244	0.257388	0.2008	0.3065	0.2032	0.267	0.2904	0.2	0.33	0.24	0.29	0.2215	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.591449	NA	NA	0.21407	0.247163	NA	0.203	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000081470.1;CLNDSDB=.;CLNDSDBID=.	8.0302966
849	11	78279790	78279790	T	G	exonic	NARS2	NA	nonsynonymous SNV	NARS2:NM_024678:exon3:c.A260C:p.N87T	exonic	ENSG00000137513	NA	nonsynonymous SNV	ENSG00000137513:ENST00000281038:exon3:c.A260C:p.N87T,ENSG00000137513:ENST00000529880:exon3:c.A260C:p.N87T	Score=591;Name=lod=335	NA	11q14.1	NA	NA	NA	NA	rs10501429	0.7	0.7	0.711	0.710064	0.7694	0.6012	0.6182	0.7753	0.7382	0.77	0.57	0.68	0.76	0.7382	0.8	1	T	0.0	B	0.0	B	0.039	N	0.000	P	-1.52	N	2.07	T	-0.955	T	0.000	T	0.114	-0.713	0.931	4.45	0.638	1.732	13.672	-0.712658	NA	1	0.796434	0.779545	NA	0.79	NA	8.0292994
849	15	101120963	101120963	T	C	exonic	LINS	NA	nonsynonymous SNV	LINS:NM_001040616:exon2:c.A85G:p.I29V	exonic	ENSG00000140471	NA	nonsynonymous SNV	ENSG00000140471:ENST00000314742:exon2:c.A85G:p.I29V,ENSG00000140471:ENST00000560272:exon2:c.A85G:p.I29V,ENSG00000140471:ENST00000560934:exon2:c.A85G:p.I29V,ENSG00000140471:ENST00000561308:exon2:c.A85G:p.I29V,ENSG00000140471:ENST00000559577:exon3:c.A85G:p.I29V,ENSG00000140471:ENST00000559736:exon3:c.A85G:p.I29V	NA	NA	15q26.3	NA	NA	NA	NA	rs11247226	0.32	0.32	0.318	0.298522	0.4523	0.246	0.2464	0.1861	0.3834	0.46	0.25	0.28	0.19	0.3836	0.47	0.86	T	0.005	B	0.005	B	0.734	N	1.000	P	0.55	N	1.84	T	-0.916	T	0.000	T	0.18	0.205	5.107	-4.72	-0.798	-2.670	10.885	0.205418	NA	0.35	0.469651	0.228779	NA	0.362	NA	8.0277824
849	1	145109549	145109549	G	T	exonic	SEC22B	NA	unknown	UNKNOWN	ncRNA_exonic	ENSG00000223380	NA	NA	NA	Score=669;Name=lod=697	NA	1q21.1	Score=858;Name=V$P300_01	Name=BDP1	Name=8	NA	rs2596331	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4997	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.061918	3.061918	NA	0.306152	0.315169	NA	0.464	NA	8.0274813
849	11	4103524	4103524	A	G	exonic	STIM1	NA	synonymous SNV	STIM1:NM_001277961:exon8:c.A1080G:p.Q360Q,STIM1:NM_001277962:exon8:c.A1080G:p.Q360Q,STIM1:NM_003156:exon8:c.A1080G:p.Q360Q	exonic	ENSG00000167323	NA	synonymous SNV	ENSG00000167323:ENST00000533977:exon5:c.A561G:p.Q187Q,ENSG00000167323:ENST00000300737:exon8:c.A1080G:p.Q360Q,ENSG00000167323:ENST00000527651:exon8:c.A1080G:p.Q360Q	Score=595;Name=lod=349	NA	11p15.4	NA	NA	Name=5	NA	rs2304891	0.43	0.43	0.4	0.388978	0.5676	0.4425	0.4841	0.0976	0.4765	0.56	0.48	0.54	0.1	0.4996	0.57	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.902	T	0.000	T	.	1.246	10.06	1.5	0.016	1.794	9.453	1.24608	1.24608	NA	0.574453	0.173785	ID=COSM428967;OCCURENCE=1(breast),1(liver)	0.377	NA	8.0250136
850	16	84695490	84695490	C	T	exonic	KLHL36	NA	synonymous SNV	KLHL36:NM_024731:exon5:c.C1602T:p.H534H	exonic	ENSG00000135686	NA	synonymous SNV	ENSG00000135686:ENST00000258157:exon4:c.C1413T:p.H471H,ENSG00000135686:ENST00000564996:exon5:c.C1602T:p.H534H	Score=522;Name=lod=177	NA	16q24.1	Score=783;Name=V$MIF1_01	NA	NA	Score=171;Name=943452_0_-_171	rs12928590	0.16	0.16	0.174	0.143371	0.2068	0.0327	0.098	0.2526	0.0767	0.23	0.03	0.12	0.25	0.2093	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.018968	NA	NA	0.226564	0.250227	NA	0.181	NA	8.0240026
850	11	73120653	73120653	A	G	exonic	FAM168A	NA	synonymous SNV	FAM168A:NM_015159:exon6:c.T474C:p.H158H	exonic	ENSG00000054965	NA	synonymous SNV	ENSG00000054965:ENST00000356467:exon6:c.T474C:p.H158H,ENSG00000054965:ENST00000064778:exon7:c.T501C:p.H167H	Score=554;Name=lod=238	NA	11q13.4	Score=858;Name=V$MRF2_01	NA	Name=10	NA	rs10793060	0.27	0.27	0.265	0.287939	0.2038	0.0665	0.2421	0.6747	0.1125	0.21	0.08	0.22	0.63	0.2338	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.381716	1.381716	NA	0.205161	0.555762	NA	0.355	NA	8.0239056
850	12	16757863	16757863	T	C	UTR5	LMO3	NM_001243611:c.-40A>G	NA	NA	UTR5	ENSG00000048540	ENST00000320122:c.-4069A>G,ENST00000261169:c.-40A>G	NA	NA	Score=590;Name=lod=333	NA	12p12.3	Score=708;Name=V$NRSF_01	Name=SUZ12	Name=13	NA	rs78062402	0.05	0.05	0.051	0.0375399	0.1173	NA	0.0476	0.003	0.0337	0.12	NA	0.05	NA	0.0776	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.704987	2.704987	NA	0.118282	0.021689	NA	0.036	NA	8.0201514
850	16	633354	633354	G	A	exonic	PIGQ	NA	nonsynonymous SNV	PIGQ:NM_148920:exon10:c.G2003A:p.C668Y	exonic	ENSG00000007541	NA	nonsynonymous SNV	ENSG00000007541:ENST00000026218:exon10:c.G2003A:p.C668Y	NA	NA	16p13.3	NA	NA	NA	NA	rs710925	0.48	0.48	0.468	0.530152	0.4324	0.6369	0.4885	0.4735	0.6268	0.41	0.57	0.47	0.48	0.4909	0.57	.	.	0.013	B	0.018	B	.	.	1.000	P	0	N	1.93	T	-0.920	T	0.000	T	0.057	0.308	5.669	-5.47	-1.690	0.644	1.904	0.308075	NA	0.24	0.390298	0.445909	NA	NA	NA	8.0197354
850	5	79026539	79026539	A	C	exonic	CMYA5	NA	nonsynonymous SNV	CMYA5:NM_153610:exon2:c.A1951C:p.S651R	exonic	ENSG00000164309	NA	nonsynonymous SNV	ENSG00000164309:ENST00000446378:exon2:c.A1951C:p.S651R	NA	NA	5q14.1	NA	NA	NA	NA	rs57544556	0.28	0.28	0.321	0.270966	0.0815	0.3621	0.0821	0.5734	0.0971	0.08	0.41	0.08	0.61	0.1462	0.61	0.23	T	0.0	B	0.0	B	0.315	N	1.000	P	-0.55	N	1.23	T	-0.933	T	0.000	T	0.029	-0.614	1.268	0.216	0.043	-1.852	2.555	-0.613993	NA	0.73	0.086473	0.476804	ID=COSM149865;OCCURENCE=1(stomach)	0.304	NA	8.0191604
850	4	178231152	178231152	C	A	exonic	NEIL3	NA	synonymous SNV	NEIL3:NM_018248:exon1:c.C45A:p.R15R	exonic	ENSG00000109674	NA	synonymous SNV	ENSG00000109674:ENST00000264596:exon1:c.C45A:p.R15R,ENSG00000109674:ENST00000513321:exon1:c.C45A:p.R15R	Score=385;Name=lod=49	NA	4q34.3	NA	Name=NFKB,HEY1,CCNT2,CHD2_(N-1250),TBP,ETS1,TAF1,GATA-1,HMGN3,Mxi1_(bHLH),Pol2,Pol2-4H8,E2F6,Sin3Ak-20,HA-E2F1	Name=2	NA	rs10013040	0.17	0.17	0.147	0.169329	0.2177	0.1369	0.1744	0.1384	0.1912	0.21	0.15	0.19	0.13	0.205	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.819335	1.819335	NA	0.225116	0.14555	NA	0.152	NA	8.0188506
850	22	32587027	32587027	G	C	exonic	RFPL2	NA	nonsynonymous SNV	RFPL2:NM_006605:exon2:c.C686G:p.T229S,RFPL2:NM_001159545:exon4:c.C599G:p.T200S,RFPL2:NM_001159546:exon4:c.C599G:p.T200S,RFPL2:NM_001098527:exon5:c.C869G:p.T290S	exonic	ENSG00000128253	NA	nonsynonymous SNV	ENSG00000128253:ENST00000248980:exon2:c.C686G:p.T229S,ENSG00000128253:ENST00000248983:exon4:c.C599G:p.T200S,ENSG00000128253:ENST00000400236:exon5:c.C599G:p.T200S,ENSG00000128253:ENST00000400237:exon5:c.C869G:p.T290S	NA	NA	22q12.3	NA	NA	NA	NA	rs136472	0.44	0.44	0.393	0.485423	0.493	0.1558	0.3804	0.8631	0.3814	0.46	0.13	0.35	0.83	0.4379	0.83	1	T	0.0	B	0.0	B	.	.	1.000	P	-1.655	N	0.07	T	-0.945	T	0.000	T	0.035	-3.005	0.001	-0.622	-2.820	-2.483	2.713	-3.005017	NA	1	0.384132	0.739219	NA	0.529	NA	8.0183014
850	3	124515308	124515308	A	G	exonic	ITGB5	NA	synonymous SNV	ITGB5:NM_002213:exon10:c.T1620C:p.F540F	exonic	ENSG00000082781	NA	synonymous SNV	ENSG00000082781:ENST00000296181:exon10:c.T1620C:p.F540F	Score=481;Name=lod=120	NA	3q21.2	NA	NA	NA	NA	rs1803825	0.31	0.31	0.312	0.336661	0.1879	0.3194	0.3473	0.4788	0.3078	0.18	0.34	0.3	0.48	0.2601	0.48	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.904	T	0.000	T	.	0.653	7.501	0.242	-0.106	-1.263	6.595	0.652613	NA	NA	0.200581	0.417839	NA	0.319	NA	8.0180856
850	5	79029383	79029383	T	G	exonic	CMYA5	NA	nonsynonymous SNV	CMYA5:NM_153610:exon2:c.T4795G:p.S1599A	exonic	ENSG00000164309	NA	nonsynonymous SNV	ENSG00000164309:ENST00000446378:exon2:c.T4795G:p.S1599A	NA	NA	5q14.1	NA	NA	NA	NA	rs1428224	0.29	0.29	0.319	0.276158	0.0815	0.3621	0.085	0.5915	0.0971	0.08	0.41	0.09	0.62	0.1471	0.62	0.86	T	0.01	B	0.007	B	0.981	N	1.000	P	1.495	L	3.31	T	-0.913	T	0.000	T	0.052	1.829	12.08	-2.73	-0.059	-0.102	0.084	1.829387	1.829387	0.84	0.086693	0.503721	NA	0.319	NA	8.0180404
850	1	152280471	152280471	C	G	exonic	FLG	NA	nonsynonymous SNV	FLG:NM_002016:exon3:c.G6891C:p.E2297D	exonic	ENSG00000143631	NA	nonsynonymous SNV	ENSG00000143631:ENST00000368799:exon3:c.G6891C:p.E2297D	NA	NA	1q21.3	NA	NA	NA	NA	rs78179835	NA	NA	0.137	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2086	0.11	1	T	0.0	B	0.0	B	.	.	1.000	P	-0.39	N	5.73	T	-1.006	T	0.000	T	0.018	0.086	4.465	-3.95	-0.492	-0.925	8.749	0.086112	NA	0.81	0.107093	0.091466	NA	0.007	NA	8.0176404
850	5	79030346	79030346	A	G	exonic	CMYA5	NA	nonsynonymous SNV	CMYA5:NM_153610:exon2:c.A5758G:p.S1920G	exonic	ENSG00000164309	NA	nonsynonymous SNV	ENSG00000164309:ENST00000446378:exon2:c.A5758G:p.S1920G	NA	NA	5q14.1	NA	NA	NA	NA	rs16877151	0.29	0.29	0.332	0.27516	0.0815	0.3621	0.085	0.5877	0.0971	0.08	0.41	0.09	0.62	0.1478	0.62	1	T	0.0	B	0.0	B	0.384	N	1.000	P	-1.24	N	3.81	T	-0.980	T	0.000	T	0.039	-0.864	0.516	4.28	0.455	0.743	6.628	-0.864257	NA	1	0.086473	0.497181	NA	0.297	NA	8.0175604
850	6	109767930	109767930	G	T	exonic	MICAL1	NA	nonsynonymous SNV	MICAL1:NM_001159291:exon17:c.C2015A:p.A672E,MICAL1:NM_022765:exon18:c.C2273A:p.A758E	exonic	ENSG00000135596	NA	nonsynonymous SNV	ENSG00000135596:ENST00000358577:exon17:c.C2015A:p.A672E,ENSG00000135596:ENST00000358807:exon18:c.C2273A:p.A758E,ENSG00000135596:ENST00000368952:exon18:c.C2330A:p.A777E	NA	NA	6q21	NA	NA	NA	NA	rs9320288	0.51	0.51	0.484	0.557109	0.4453	0.4514	0.4971	0.7579	0.5521	0.41	0.47	0.47	0.73	0.491	0.73	1	T	0.0	B	0.0	B	0.350	N	1.000	P	-1.845	N	0.76	T	-0.942	T	0.009	T	0.135	-1.101	0.142	2.24	0.400	1.565	10.207	-1.100897	NA	1	0.380698	0.68384	NA	0.246	NA	8.0163354
850	10	96798749	96798749	T	C	exonic	CYP2C8	NA	nonsynonymous SNV	CYP2C8:NM_001198854:exon7:c.A890G:p.K297R,CYP2C8:NM_000770:exon8:c.A1196G:p.K399R,CYP2C8:NM_001198853:exon8:c.A986G:p.K329R,CYP2C8:NM_001198855:exon9:c.A986G:p.K329R	exonic	ENSG00000138115	NA	nonsynonymous SNV	ENSG00000138115:ENST00000535898:exon7:c.A890G:p.K297R,ENSG00000138115:ENST00000371270:exon8:c.A1196G:p.K399R	NA	NA	10q23.33	NA	NA	NA	NA	rs10509681	0.06	0.06	0.046	0.0457268	0.1183	0.001	0.0994	0.0083	0.0297	0.11	0.0035	0.13	0.01	0.0826	0.13	0.11	T	0.021	B	0.079	B	0.109	U	1.000	P	1.91	M	-0.49	T	-1.043	T	0.004	T	0.05	1.369	10.51	-1.44	-0.368	-0.030	4.629	1.369107	1.369107	0.02	0.116628	0.024512	NA	0.094	NA	8.0158054
851	7	32909182	32909182	G	A	exonic	KBTBD2	NA	synonymous SNV	KBTBD2:NM_015483:exon4:c.C1647T:p.Y549Y	exonic	ENSG00000170852	NA	synonymous SNV	ENSG00000170852:ENST00000304056:exon4:c.C1647T:p.Y549Y	Score=675;Name=lod=737	NA	7p14.3	Score=808;Name=V$CHX10_01	Name=Pol2(phosphoS2)	NA	NA	rs752730	0.2	0.2	0.162	0.192692	0.2018	0.2242	0.4207	0.0756	0.1472	0.2	0.22	0.35	0.06	0.2335	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.397144	NA	NA	0.21686	0.090785	NA	0.181	NA	8.0145066
851	4	7780582	7780582	C	T	exonic	AFAP1	NA	nonsynonymous SNV	AFAP1:NM_198595:exon13:c.G1552A:p.V518M,AFAP1:NM_001134647:exon14:c.G1804A:p.V602M	exonic	ENSG00000196526	NA	nonsynonymous SNV	ENSG00000196526:ENST00000360265:exon12:c.G1552A:p.V518M,ENSG00000196526:ENST00000358461:exon13:c.G1552A:p.V518M,ENSG00000196526:ENST00000382543:exon13:c.G1804A:p.V602M,ENSG00000196526:ENST00000420658:exon14:c.G1804A:p.V602M	NA	NA	4p16.1	NA	NA	Name=14	NA	rs41264705	0.15	0.15	0.128	0.110623	0.2992	0.0615	0.1455	0.0106	0.0777	0.28	0.07	0.19	0.02	0.2211	0.3	0.1	T	0.844	P	0.075	B	0.126	N	1.000	P	1.39	L	2.48	T	-0.946	T	0.000	T	0.024	0.797	8.194	-0.23	-0.038	-0.488	5.890	0.796722	NA	0.09	0.299767	0.054471	NA	0.123	NA	8.0132664
851	4	187629140	187629140	G	C	exonic	FAT1	NA	nonsynonymous SNV	FAT1:NM_005245:exon2:c.C1842G:p.F614L	exonic	ENSG00000083857	NA	nonsynonymous SNV	ENSG00000083857:ENST00000441802:exon2:c.C1842G:p.F614L	Score=449;Name=lod=89	NA	4q35.2	NA	NA	NA	NA	rs367863	0.68	0.68	0.681	0.690495	0.7773	0.502	0.6974	0.708	0.7669	0.77	0.5	0.74	0.7	0.7476	0.8	0.87	T	0.0	B	0.0	B	0.000	N	1.000	P	-1.475	N	1.35	T	-0.980	T	0.000	T	0.021	-2.081	0.006	3.53	0.860	1.447	4.962	-2.08052	NA	0.86	0.795266	0.746791	NA	0.732	NA	8.0131674
851	11	61111346	61111346	C	G	exonic	DAK	NA	nonsynonymous SNV	DAK:NM_015533:exon12:c.C1001G:p.A334G	exonic	ENSG00000149476	NA	nonsynonymous SNV	ENSG00000149476:ENST00000529479:exon10:c.C998G:p.A333G,ENSG00000149476:ENST00000394900:exon12:c.C1001G:p.A334G	NA	NA	11q12.2	NA	NA	NA	NA	rs35723406	0.05	0.05	0.045	0.038738	0.1213	0.001	0.0648	0.0038	0.0215	0.1	0.0017	0.07	0.0041	0.0805	0.12	0.02	D	0.0	B	0.005	B	0.293	N	1.000	P	1.355	L	1.53	T	-1.078	T	0.001	T	0.122	1.938	12.44	-0.714	-0.346	0.683	8.248	1.938144	1.938144	0.13	0.119679	0.024739	NA	0.065	NA	8.0118544
851	19	9020153	9020153	C	T	exonic	MUC16	NA	nonsynonymous SNV	MUC16:NM_024690:exon21:c.G37342A:p.E12448K	exonic	ENSG00000181143	NA	nonsynonymous SNV	ENSG00000181143:ENST00000397910:exon21:c.G37342A:p.E12448K	NA	NA	19p13.2	NA	NA	NA	NA	rs75217292	0.07	0.07	0.061	0.0896565	0.1083	0.0982	0.1282	0.0098	0.1421	0.08	0.08	0.12	0.01	0.1092	0.12	0	D	0.01	B	0.027	B	.	.	.	.	1.62	L	0.94	T	-1.059	T	0.002	T	0.036	0.702	7.743	-0.36	-0.111	-0.494	6.103	0.701679	NA	NA	0.104702	0.025889	NA	NA	NA	8.0111314
851	1	23885498	23885498	T	C	exonic	ID3	NA	nonsynonymous SNV	ID3:NM_002167:exon2:c.A313G:p.T105A	exonic	ENSG00000117318	NA	nonsynonymous SNV	ENSG00000117318:ENST00000374561:exon2:c.A313G:p.T105A	NA	NA	1p36.12	NA	Name=TBP,Pol2	Name=121	NA	rs11574	0.86	0.86	0.891	0.890375	0.7575	0.9692	0.7392	0.9894	0.9192	0.75	0.98	0.75	0.99	0.8037	0.99	0.99	T	0.0	B	0.0	B	0.902	N	1.000	P	-0.55	N	-0.56	T	-0.986	T	0.000	T	0.016	-1.671	0.012	-2.76	-0.734	-0.616	4.909	-1.671487	NA	0.79	0.761512	0.939855	NA	0.819	NA	8.0106214
851	3	119379186	119379186	C	T	exonic	POPDC2	NA	nonsynonymous SNV	POPDC2:NM_022135:exon1:c.G85A:p.V29I	exonic	ENSG00000121577	NA	nonsynonymous SNV	ENSG00000121577:ENST00000264231:exon1:c.G85A:p.V29I,ENSG00000121577:ENST00000341124:exon1:c.G85A:p.V29I,ENSG00000121577:ENST00000468801:exon1:c.G85A:p.V29I,ENSG00000121577:ENST00000493094:exon1:c.G85A:p.V29I,ENSG00000121577:ENST00000538678:exon1:c.G85A:p.V29I	NA	NA	3q13.33	NA	NA	NA	NA	rs4688023	0.38	0.38	0.361	0.401757	0.4304	0.3323	0.4611	0.2935	0.5481	0.43	0.34	0.47	0.26	0.4499	0.49	0.91	T	0.026	B	0.015	B	0.574	N	0.982	P	0.705	N	1.08	T	-0.947	T	0.000	T	0.061	-0.448	1.924	-5.63	-0.985	-0.433	10.922	-0.447524	NA	0.84	0.442558	0.318656	NA	0.42	NA	8.0104754
851	5	150565008	150565008	C	T	exonic	CCDC69	NA	nonsynonymous SNV	CCDC69:NM_015621:exon7:c.G590A:p.R197K	exonic	ENSG00000198624	NA	nonsynonymous SNV	ENSG00000198624:ENST00000355417:exon7:c.G590A:p.R197K	Score=592;Name=lod=340	NA	5q33.1	NA	NA	NA	NA	rs248427	0.42	0.42	0.43	0.408946	0.4433	0.3492	0.3991	0.4516	0.3845	0.44	0.35	0.42	0.47	0.4273	0.47	1	T	0.0	B	0.0	B	0.005	N	1.000	P	-1.795	N	3.13	T	-0.927	T	0.000	T	0.11	-0.191	3.07	2.25	0.328	0.830	7.955	-0.191436	NA	1	0.452558	0.461643	NA	0.399	NA	8.0101754
851	16	1306346	1306346	C	T	exonic	TPSD1	NA	nonsynonymous SNV	TPSD1:NM_012217:exon1:c.C65T:p.P22L	exonic	ENSG00000095917	NA	nonsynonymous SNV	ENSG00000095917:ENST00000211076:exon1:c.C65T:p.P22L,ENSG00000095917:ENST00000397534:exon2:c.C44T:p.P15L	NA	NA	16p13.3	NA	NA	NA	NA	rs3865205	0.17	0.17	0.14	0.174121	0.0984	0.123	0.2522	0.3003	0.0787	0.09	0.13	0.23	0.31	0.1341	0.31	0.7	T	0.0	B	0.0	B	0.069	N	1.000	P	0	N	-1.4	T	-1.091	T	0.000	T	0.111	0.41	6.229	0.112	-0.544	-2.678	6.961	0.410456	NA	0.03	0.091089	0.263086	NA	0.029	NA	8.0097444
851	12	3788222	3788222	G	A	exonic	EFCAB4B	NA	nonsynonymous SNV	EFCAB4B:NM_001144958:exon6:c.C383T:p.A128V,EFCAB4B:NM_032680:exon6:c.C383T:p.A128V	exonic	ENSG00000130038	NA	nonsynonymous SNV	ENSG00000130038:ENST00000252322:exon6:c.C383T:p.A128V,ENSG00000130038:ENST00000440314:exon6:c.C383T:p.A128V,ENSG00000130038:ENST00000444507:exon6:c.C383T:p.A128V	NA	NA	12p13.32	NA	NA	NA	NA	rs242017	0.23	0.23	0.201	0.226637	0.2644	0.1319	0.3372	0.1785	0.272	0.27	0.14	0.34	0.19	0.2762	0.34	0.52	T	0.514	P	0.167	B	0.605	N	1.000	P	2.175	M	2.46	T	-1.029	T	0.000	T	0.088	1.13	9.608	0.878	0.291	0.131	6.884	1.13043	NA	0.14	0.283605	0.194281	NA	0.232	NA	8.0091284
851	5	178359136	178359136	A	G	exonic	ZFP2	NA	synonymous SNV	ZFP2:NM_030613:exon5:c.A822G:p.Q274Q	exonic	ENSG00000198939	NA	synonymous SNV	ENSG00000198939:ENST00000503510:exon4:c.A822G:p.Q274Q,ENSG00000198939:ENST00000520301:exon4:c.A822G:p.Q274Q,ENSG00000198939:ENST00000361362:exon5:c.A822G:p.Q274Q,ENSG00000198939:ENST00000523286:exon5:c.A822G:p.Q274Q	Score=529;Name=lod=188	NA	5q35.3	Score=909;Name=V$CEBP_01	Name=ZNF274,SETDB1,KAP1	NA	NA	rs961030	0.28	0.28	0.267	NA	NA	NA	NA	NA	NA	0.34	0.37	0.26	0.13	0.329	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.276436	NA	NA	0.328605	0.172265	NA	0.181	NA	8.0090616
851	19	10395683	10395683	A	G	exonic	ICAM1	NA	nonsynonymous SNV	ICAM1:NM_000201:exon6:c.A1405G:p.K469E	exonic	ENSG00000090339	NA	nonsynonymous SNV	ENSG00000090339:ENST00000423829:exon4:c.A739G:p.K247E,ENSG00000090339:ENST00000264832:exon6:c.A1405G:p.K469E	NA	Name=Soluble ICAM-1	19p13.2	NA	NA	NA	NA	rs5498	0.35	0.35	0.322	0.358826	0.4662	0.2788	0.5548	0.1354	0.4939	0.46	0.3	0.51	0.12	0.4281	0.51	1	T	0.0	B	0.0	B	0.140	N	1.000	P	-1.395	N	2.72	T	-0.921	T	0.000	T	0.013	-0.772	0.754	-2.57	-0.217	0.132	5.408	-0.771911	NA	1	0.431163	0.192692	NA	0.362	NA	8.0078704
851	12	55714772	55714772	G	A	exonic	OR6C1	NA	nonsynonymous SNV	OR6C1:NM_001005182:exon1:c.G389A:p.C130Y	exonic	ENSG00000205330	NA	nonsynonymous SNV	ENSG00000205330:ENST00000379668:exon1:c.G389A:p.C130Y	Score=340;Name=lod=32	NA	12q13.2	NA	NA	NA	NA	rs7132431	0.81	0.81	0.798	0.782748	0.7744	0.8581	0.7695	0.8298	0.6595	0.76	0.88	0.78	0.81	0.7683	0.88	1	T	0.0	B	0.0	B	0.000	N	0.999	P	-3.92	N	7.44	T	-0.999	T	0.000	T	0.035	-2.23	0.005	3.41	0.266	6.800	6.561	-2.230293	NA	1	0.784419	0.82433	NA	0.841	NA	8.0062144
851	20	52675188	52675188	G	T	exonic	BCAS1	NA	nonsynonymous SNV	BCAS1:NM_003657:exon2:c.C70A:p.Q24K	exonic	ENSG00000064787	NA	nonsynonymous SNV	ENSG00000064787:ENST00000371435:exon2:c.C70A:p.Q24K,ENSG00000064787:ENST00000371440:exon2:c.C70A:p.Q24K,ENSG00000064787:ENST00000395961:exon2:c.C70A:p.Q24K	NA	NA	20q13.2	NA	Name=FOXA1_(SC-101058),FOXA1_(C-20)	Name=5	NA	rs394732	0.54	0.54	0.551	0.576078	0.4175	0.6339	0.3199	0.8094	0.546	0.42	0.6	0.37	0.79	0.4752	0.79	1	T	0.0	B	0.0	B	0.229	N	0.002	P	-1.78	N	2.73	T	-1.025	T	0.000	T	0.026	-1.004	0.254	-0.322	-0.426	0.213	5.652	-1.004058	NA	1	0.434419	0.74512	NA	0.572	NA	8.0062144
851	11	103907956	103907956	G	A	exonic	DDI1	NA	nonsynonymous SNV	DDI1:NM_001001711:exon1:c.G406A:p.G136S	exonic	ENSG00000170967	NA	nonsynonymous SNV	ENSG00000170967:ENST00000302259:exon1:c.G406A:p.G136S	NA	NA	11q22.3	NA	Name=NRSF	NA	NA	rs7102675	0.09	0.09	0.097	0.0810703	0.1213	0.0139	0.036	0.1301	0.0746	0.14	0.02	0.03	0.13	0.0955	0.14	0.83	T	0.001	B	0.001	B	0.923	N	1.000	P	-0.345	N	2.04	T	-0.967	T	0.000	T	0.007	-0.751	0.815	-0.63	-0.108	0.040	4.406	-0.750681	NA	0.81	0.11084	0.138965	NA	0.08	NA	8.0056934
851	6	117244374	117244374	T	C	exonic	RFX6	NA	synonymous SNV	RFX6:NM_173560:exon14:c.T1542C:p.N514N	exonic	ENSG00000185002	NA	synonymous SNV	ENSG00000185002:ENST00000332958:exon14:c.T1542C:p.N514N	Score=677;Name=lod=754	NA	6q22.1	Score=735;Name=V$MEF2_04	NA	NA	NA	rs7770158	0.3	0.3	0.285	0.339856	0.2286	0.4236	0.2896	0.2927	0.4673	0.23	0.41	0.27	0.29	0.2552	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.88701	NA	NA	0.177674	0.279619	NA	0.319	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118180.2;CLNDSDB=.;CLNDSDBID=.	8.0051926
852	10	71562437	71562437	G	A	exonic	COL13A1	NA	synonymous SNV	COL13A1:NM_001130103:exon1:c.G258A:p.T86T,COL13A1:NM_080798:exon1:c.G258A:p.T86T,COL13A1:NM_080800:exon1:c.G258A:p.T86T,COL13A1:NM_080801:exon1:c.G258A:p.T86T,COL13A1:NM_080802:exon1:c.G258A:p.T86T,COL13A1:NM_080805:exon1:c.G258A:p.T86T	exonic	ENSG00000197467	NA	synonymous SNV	ENSG00000197467:ENST00000354547:exon1:c.G258A:p.T86T,ENSG00000197467:ENST00000356340:exon1:c.G258A:p.T86T,ENSG00000197467:ENST00000357811:exon1:c.G258A:p.T86T,ENSG00000197467:ENST00000398964:exon1:c.G258A:p.T86T,ENSG00000197467:ENST00000398966:exon1:c.G258A:p.T86T,ENSG00000197467:ENST00000398968:exon1:c.G258A:p.T86T,ENSG00000197467:ENST00000398969:exon1:c.G258A:p.T86T,ENSG00000197467:ENST00000398971:exon1:c.G258A:p.T86T,ENSG00000197467:ENST00000398972:exon1:c.G258A:p.T86T,ENSG00000197467:ENST00000398973:exon1:c.G258A:p.T86T,ENSG00000197467:ENST00000398974:exon1:c.G258A:p.T86T,ENSG00000197467:ENST00000398978:exon1:c.G258A:p.T86T,ENSG00000197467:ENST00000479733:exon1:c.G258A:p.T86T,ENSG00000197467:ENST00000517713:exon1:c.G258A:p.T86T,ENSG00000197467:ENST00000520133:exon1:c.G258A:p.T86T,ENSG00000197467:ENST00000520267:exon1:c.G258A:p.T86T,ENSG00000197467:ENST00000522165:exon1:c.G258A:p.T86T	Score=610;Name=lod=400	NA	10q22.1	Score=771;Name=V$MEF2_01	Name=TCF4,CTCF,ZNF263	Name=98	NA	rs10998973	0.56	0.56	0.544	0.527157	0.5686	0.7073	0.6571	0.3139	0.4949	0.57	0.72	0.64	0.31	0.5526	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.479546	1.479546	NA	0.540777	0.301906	ID=COSM427823,COSM427824;OCCURENCE=1(breast)	0.297	NA	8.0046896
852	6	117248218	117248218	T	C	exonic	RFX6	NA	synonymous SNV	RFX6:NM_173560:exon17:c.T1914C:p.G638G	exonic	ENSG00000185002	NA	synonymous SNV	ENSG00000185002:ENST00000332958:exon17:c.T1914C:p.G638G	Score=462;Name=lod=101	NA	6q22.1	Score=863;Name=V$TAL1BETAITF2_01	NA	NA	NA	rs611349	0.3	0.3	0.276	0.340455	0.2286	0.4226	0.2911	0.2958	0.4663	0.23	0.41	0.27	0.29	0.2556	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.240689	NA	NA	0.177907	0.283931	NA	0.319	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118182.2;CLNDSDB=.;CLNDSDBID=.	8.0045596
852	1	17085427	17085427	T	C	exonic	MST1L	NA	nonsynonymous SNV	MST1L:NM_001271733:exon10:c.A1264G:p.I422V	ncRNA_exonic	ENSG00000186715	NA	NA	NA	Score=694;Name=lod=882	NA	1p36.13	NA	NA	NA	NA	rs2002186	NA	NA	0.228	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4958	NA	0	D	0.004	B	0.003	B	0.101	N	.	.	.	.	.	.	-1.001	T	0.061	T	0.073	-0.706	0.952	.	0.000	-0.903	2.818	-0.70601	NA	0.58	NA	NA	NA	NA	NA	8.0042
852	19	53345060	53345060	G	C	exonic	ZNF468	NA	nonsynonymous SNV	ZNF468:NM_001008801:exon4:c.C487G:p.Q163E	exonic	ENSG00000204604	NA	nonsynonymous SNV	ENSG00000204604:ENST00000390651:exon4:c.C328G:p.Q110E,ENSG00000204604:ENST00000595646:exon4:c.C487G:p.Q163E,ENSG00000204604:ENST00000396409:exon5:c.C328G:p.Q110E	NA	NA	19q13.41	NA	NA	NA	NA	rs61747364	0.09	0.09	0.074	0.0970447	0.1163	0.0496	0.1124	0.0998	0.1115	0.11	0.05	0.09	0.08	0.1067	0.11	0.88	T	0.004	B	0.001	B	.	.	1.000	P	1.765	L	3.3	T	-0.912	T	0.000	T	0.04	-0.019	3.918	-2.89	-0.674	-0.246	5.938	-0.018702	NA	0.07	0.106279	0.093963	NA	0.094	NA	8.0040544
852	5	137244517	137244517	G	A	exonic	PKD2L2	NA	nonsynonymous SNV	PKD2L2:NM_001258448:exon8:c.G1144A:p.V382I,PKD2L2:NM_014386:exon8:c.G1210A:p.V404I	exonic	ENSG00000078795	NA	nonsynonymous SNV	ENSG00000078795:ENST00000350250:exon7:c.G1108A:p.V370I,ENSG00000078795:ENST00000290431:exon8:c.G1210A:p.V404I,ENSG00000078795:ENST00000502810:exon8:c.G1144A:p.V382I,ENSG00000078795:ENST00000508883:exon8:c.G1210A:p.V404I	Score=653;Name=lod=602	NA	5q31.2	NA	NA	NA	NA	rs1880458	0.78	0.78	0.783	0.787939	0.7575	0.9702	0.7752	0.593	0.9039	0.76	0.97	0.72	0.61	0.7942	0.97	0.39	T	0.0	B	0.001	B	0.108	N	0.000	P	-0.345	N	-0.48	T	-1.003	T	0.000	T	0.023	1.983	12.59	3.47	0.470	4.450	3.773	1.982601	1.982601	0.25	0.777778	0.626163	NA	0.717	NA	8.0038554
852	6	109764535	109764535	G	T	exonic	SMPD2	NA	nonsynonymous SNV	SMPD2:NM_003080:exon9:c.G795T:p.R265S	exonic	ENSG00000135587	NA	nonsynonymous SNV	ENSG00000135587:ENST00000258052:exon9:c.G795T:p.R265S	NA	NA	6q21	NA	NA	NA	NA	rs1476387	0.53	0.53	0.546	0.552915	0.4314	0.4534	0.4928	0.7549	0.5501	0.43	0.51	0.49	0.75	0.4767	0.75	0.83	T	0.0	B	0.0	B	0.270	N	1.000	P	0.345	N	-1.37	T	-1.004	T	0.073	T	0.261	-2.274	0.004	-7.33	-1.675	-0.424	3.582	-2.274012	NA	0.88	0.421744	0.697004	ID=COSM450298;OCCURENCE=1(breast)	0.507	NA	8.0034894
852	19	53345176	53345176	C	T	exonic	ZNF468	NA	nonsynonymous SNV	ZNF468:NM_001008801:exon4:c.G371A:p.G124D	exonic	ENSG00000204604	NA	nonsynonymous SNV	ENSG00000204604:ENST00000390651:exon4:c.G212A:p.G71D,ENSG00000204604:ENST00000595646:exon4:c.G371A:p.G124D,ENSG00000204604:ENST00000396409:exon5:c.G212A:p.G71D	NA	NA	19q13.41	NA	NA	NA	NA	rs61732713	0.09	0.09	0.088	0.0970447	0.1163	0.0496	0.1124	0.0998	0.1115	0.11	0.05	0.1	0.08	0.1068	0.11	1	T	0.0	B	0.0	B	.	.	1.000	P	-1.485	N	3.49	T	-0.938	T	0.000	T	0.098	-2.578	0.003	-1.3	-0.484	-2.593	6.147	-2.578419	NA	1	0.107326	0.096005	NA	0.145	NA	8.0029074
852	19	55994240	55994240	C	T	exonic	ZNF628	NA	synonymous SNV	ZNF628:NM_033113:exon3:c.C1680T:p.H560H	exonic	ENSG00000197483	NA	synonymous SNV	ENSG00000197483:ENST00000391718:exon3:c.C1668T:p.H556H,ENSG00000197483:ENST00000598519:exon3:c.C1680T:p.H560H	Score=535;Name=lod=199	NA	19q13.42	Score=899;Name=V$ARNT_01	Name=Pol2	Name=2	NA	rs12981044	0.54	0.54	0.552	0.568091	0.5368	0.4375	0.536	0.6717	0.6176	0.52	0.46	0.52	0.67	0.5606	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.397924	NA	NA	0.566589	0.649159	NA	0.413	NA	8.0026776
852	20	29625935	29625935	A	G	ncRNA_exonic	FRG1B	NA	NA	NA	exonic	ENSG00000149531	NA	nonsynonymous SNV	ENSG00000149531:ENST00000278882:exon5:c.A179G:p.H60R,ENSG00000149531:ENST00000358464:exon5:c.A179G:p.H60R,ENSG00000149531:ENST00000439954:exon5:c.A194G:p.H65R	Score=607;Name=lod=390	NA	20q11.21	NA	NA	NA	NA	rs62198354	NA	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4974	NA	1	T	0.0	B	0.001	B	0.000	N	0.999	P	.	.	1.18	T	-0.968	T	0.031	T	0.74	-2.807	0	0.695	0.267	5.229	6.505	-2.806684	NA	1	NA	NA	NA	NA	NA	8.0026
852	16	1272038	1272038	G	A	exonic	TPSG1	NA	nonsynonymous SNV	TPSG1:NM_012467:exon6:c.C716T:p.T239I	exonic	ENSG00000116176	NA	nonsynonymous SNV	ENSG00000116176:ENST00000234798:exon6:c.C716T:p.T239I	NA	NA	16p13.3	NA	NA	NA	NA	rs11248860	0.87	0.87	0.881	0.877596	0.7714	0.998	0.8026	0.8956	0.8916	0.77	1	0.79	0.91	0.8069	1	1	T	0.0	B	0.0	B	.	.	1.000	P	-3.05	N	-2.51	D	-0.942	T	0.000	T	0.23	-2.37	0.004	4.1	0.521	3.120	8.066	-2.36995	NA	1	0.753203	0.872545	ID=COSM434650;OCCURENCE=1(breast)	0.906	NA	8.0018304
852	5	72419456	72419456	C	G	exonic	TMEM171	NA	nonsynonymous SNV	TMEM171:NM_001161342:exon2:c.C256G:p.R86G,TMEM171:NM_173490:exon2:c.C256G:p.R86G	exonic	ENSG00000157111	NA	nonsynonymous SNV	ENSG00000157111:ENST00000287773:exon2:c.C256G:p.R86G,ENSG00000157111:ENST00000454765:exon2:c.C256G:p.R86G	NA	NA	5q13.2	NA	NA	Name=4	NA	rs637450	0.41	0.41	0.399	0.438299	0.2654	0.5933	0.3285	0.5325	0.407	0.26	0.57	0.35	0.51	0.3196	0.57	0.08	T	0.462	P	0.151	B	0.714	N	1.000	P	0.975	L	1.83	T	-0.932	T	0.000	T	0.207	0.897	8.646	-0.798	-0.053	0.482	8.079	0.897133	NA	0.07	0.247093	0.496142	NA	0.355	NA	8.0012404
852	1	144879264	144879264	A	G	exonic	PDE4DIP	NA	nonsynonymous SNV	PDE4DIP:NM_001198834:exon27:c.T4186C:p.W1396R,PDE4DIP:NM_014644:exon27:c.T4186C:p.W1396R,PDE4DIP:NM_001198832:exon30:c.T4054C:p.W1352R	exonic	ENSG00000178104	NA	nonsynonymous SNV	ENSG00000178104:ENST00000369354:exon27:c.T4186C:p.W1396R,ENSG00000178104:ENST00000369356:exon27:c.T4186C:p.W1396R,ENSG00000178104:ENST00000313382:exon30:c.T4054C:p.W1352R,ENSG00000178104:ENST00000369359:exon30:c.T4594C:p.W1532R,ENSG00000178104:ENST00000530740:exon30:c.T4594C:p.W1532R	Score=507;Name=lod=153	NA	1q21.1	Score=889;Name=V$NFKB_C	NA	NA	NA	rs2798901	0.76	0.76	0.717	0.710064	0.6451	0.9296	0.7248	0.5378	0.773	0.69	0.96	0.78	0.59	0.6879	0.96	0.82	T	0.0	B	0.0	B	.	.	0.000	P	-1.995	N	5.15	T	-1.062	T	0.000	T	0.166	-0.587	1.368	-0.119	-0.204	0.849	6.453	-0.586922	NA	1	NA	NA	NA	0.732	NA	8.0003334
852	1	40183755	40183755	T	C	intergenic	HPCAL4,PPIE	dist=26666;dist=20762	NA	NA	ncRNA_exonic	ENSG00000225333	NA	NA	NA	Score=702;Name=lod=954	NA	1p34.2	NA	Name=CTCF,Rad21	Name=2	NA	NA	NA	NA	NA	0.000599042	NA	NA	0.0043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.180252	NA	NA	NA	NA	NA	NA	NA	8
852	11	121109213	121109213	A	G	intergenic	TECTA,SC5D	dist=47698;dist=54175	NA	NA	ncRNA_exonic	ENSG00000254515	NA	NA	NA	Score=694;Name=lod=878	NA	11q23.3	NA	Name=MEF2A	Name=2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.255401	NA	NA	NA	NA	NA	NA	NA	8
852	17	16722362	16722362	C	T	intergenic	USP32P1,KRT16P2	dist=14543;dist=11435	NA	NA	ncRNA_exonic	ENSG00000226145	NA	NA	NA	Score=663;Name=lod=657	NA	17p11.2	Score=816;Name=V$AP4_01	Name=CTCF,CTCFL_(SC-98982)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.213933	NA	NA	NA	NA	NA	NA	NA	8
852	1	151282640	151282640	G	A	intronic	PI4KB	NA	NA	NA	intronic	ENSG00000143393	NA	NA	NA	Score=505;Name=lod=151	NA	1q21.3	NA	Name=CTCF	Name=74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00004744	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.878022	1.878022	NA	NA	NA	NA	NA	NA	7.9999526
852	7	100608779	100608779	C	T	intergenic	ACHE,MUC12	dist=115238;dist=4125	NA	NA	exonic	ENSG00000169894	NA	synonymous SNV	ENSG00000169894:ENST00000422757:exon6:c.C628T:p.L210L,ENSG00000169894:ENST00000319509:exon7:c.C2158T:p.L720L	Score=358;Name=lod=38	NA	7q22.1	NA	Name=ETS1,GABP,CTCF,Rad21,USF-1	Name=5	NA	rs73163793	NA	NA	NA	0.000998403	0.001	NA	0.0014	0.0023	NA	NA	NA	NA	NA	0.5001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.001073	NA	0.02	NA	NA	NA	NA	CLINSIG=other;CLNDBN=Malignant_melanoma;CLNREVSTAT=not;CLNACC=RCV000067537.1;CLNDSDB=MedGen:SNOMED_CT;CLNDSDBID=C0025202:2092003	7.9989
852	19	18376407	18376407	T	A	exonic	KIAA1683	NA	nonsynonymous SNV	KIAA1683:NM_001145304:exon3:c.A1943T:p.Y648F,KIAA1683:NM_001145305:exon3:c.A1805T:p.Y602F,KIAA1683:NM_025249:exon3:c.A1943T:p.Y648F	exonic	ENSG00000130518	NA	nonsynonymous SNV	ENSG00000130518:ENST00000392413:exon3:c.A1943T:p.Y648F,ENSG00000130518:ENST00000600328:exon3:c.A1943T:p.Y648F,ENSG00000130518:ENST00000600359:exon3:c.A1805T:p.Y602F	NA	NA	19p13.11	NA	NA	NA	NA	rs8110972	0.53	0.53	0.525	0.544129	0.4294	0.5516	0.5908	0.6929	0.4202	0.43	0.52	0.53	0.69	0.4796	0.69	0.63	T	0.002	B	0.003	B	0.431	N	1.000	P	0.755	N	3.62	T	-0.955	T	0.000	T	0.066	0.644	7.458	-8.1	-1.462	-0.546	0.460	0.644115	NA	0.2	0.425814	0.671811	NA	0.5	NA	7.9985194
852	1	21940555	21940555	C	T	exonic	RAP1GAP	NA	nonsynonymous SNV	RAP1GAP:NM_001145658:exon8:c.G511A:p.A171T,RAP1GAP:NM_002885:exon8:c.G319A:p.A107T,RAP1GAP:NM_001145657:exon9:c.G319A:p.A107T	exonic	ENSG00000076864	NA	nonsynonymous SNV	ENSG00000076864:ENST00000374763:exon5:c.G319A:p.A107T,ENSG00000076864:ENST00000374761:exon6:c.G412A:p.A138T,ENSG00000076864:ENST00000290101:exon8:c.G511A:p.A171T,ENSG00000076864:ENST00000359708:exon8:c.G511A:p.A171T,ENSG00000076864:ENST00000374765:exon8:c.G319A:p.A107T,ENSG00000076864:ENST00000471600:exon8:c.G319A:p.A107T,ENSG00000076864:ENST00000495204:exon8:c.G319A:p.A107T,ENSG00000076864:ENST00000542643:exon9:c.G319A:p.A107T	NA	NA	1p36.12	NA	NA	NA	NA	rs2275363	0.4	0.4	0.44	0.392971	0.4443	0.4196	0.2781	0.3646	0.4325	0.45	0.45	0.3	0.35	0.4351	0.46	0.53	T	0.001	B	0.002	B	0.247	N	1.000	P	1.65	L	-3.27	D	-1.021	T	0.000	T	0.122	1.498	10.96	-1.45	-0.517	-1.035	10.547	1.498257	1.498257	0.45	0.455698	0.366319	NA	0.348	NA	7.9982354
852	10	25888180	25888180	A	G	exonic	GPR158	NA	nonsynonymous SNV	GPR158:NM_020752:exon11:c.A3625G:p.I1209V	exonic	ENSG00000151025	NA	nonsynonymous SNV	ENSG00000151025:ENST00000376351:exon11:c.A3625G:p.I1209V	NA	NA	10p12.1	NA	NA	NA	NA	rs10828833	0.64	0.64	0.643	0.663538	0.3956	0.7579	0.5144	0.9652	0.5399	0.41	0.76	0.55	0.95	0.5157	0.95	1	T	0.0	B	0.0	B	0.255	N	1.000	P	-0.345	N	0.29	T	-0.958	T	0.000	T	0.015	-1.856	0.009	3.1	0.136	2.214	10.728	-1.856044	NA	1	0.424168	0.866773	NA	0.536	NA	7.9978654
852	15	89400339	89400339	A	C	exonic	ACAN	NA	nonsynonymous SNV	ACAN:NM_001135:exon12:c.A4523C:p.E1508A,ACAN:NM_013227:exon12:c.A4523C:p.E1508A	exonic	ENSG00000157766	NA	nonsynonymous SNV	ENSG00000157766:ENST00000561243:exon11:c.A4523C:p.E1508A,ENSG00000157766:ENST00000352105:exon12:c.A4523C:p.E1508A,ENSG00000157766:ENST00000439576:exon12:c.A4523C:p.E1508A,ENSG00000157766:ENST00000559004:exon12:c.A4523C:p.E1508A	NA	NA	15q26.1	NA	NA	NA	NA	rs2882676	0.43	0.43	0.418	0.424121	0.6521	0.25	0.3804	0.3396	0.5143	0.67	0.21	0.46	0.32	0.5348	0.67	0.35	T	0.58	P	0.304	B	.	.	1.000	P	.	.	-3.51	D	-0.995	T	0.000	T	0.113	-0.376	2.232	-2.06	-0.544	0.825	5.408	-0.375823	NA	0.16	0.649183	0.392991	NA	0.471	NA	7.9972504
852	20	1616137	1616137	G	A	exonic	SIRPG	NA	nonsynonymous SNV	SIRPG:NM_018556:exon4:c.C857T:p.S286L	exonic	ENSG00000089012	NA	nonsynonymous SNV	ENSG00000089012:ENST00000303415:exon4:c.C857T:p.S286L,ENSG00000089012:ENST00000381580:exon4:c.C758T:p.S253L	Score=289;Name=lod=20	NA	20p13	NA	NA	NA	NA	rs6034239	0.55	0.55	0.551	0.595647	0.4254	0.6369	0.4236	0.7625	0.6247	0.43	0.6	0.45	0.77	0.4991	0.77	1	T	0.0	B	0.0	B	0.049	N	0.000	P	-3.025	N	6.47	T	-1.040	T	0.000	T	0.065	-1.25	0.051	1.6	0.090	1.384	3.570	-1.249973	NA	1	0.411628	0.726509	NA	0.551	NA	7.9972054
852	4	100870611	100870611	C	G	intronic	H2AFZ	NA	NA	NA	intronic	ENSG00000164032	NA	NA	NA	Score=295;Name=lod=21	NA	4q23	NA	Name=Max,USF-1,Pol2(b),USF1_(SC-8983),Pol2	Name=56	NA	NA	NA	NA	NA	0.000798722	0.002	NA	0.0029	NA	NA	NA	NA	NA	NA	0.0008	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.499734	1.499734	NA	NA	NA	NA	NA	NA	7.9972
852	8	95188850	95188850	T	C	exonic	CDH17	NA	nonsynonymous SNV	CDH17:NM_001144663:exon5:c.A343G:p.K115E,CDH17:NM_004063:exon5:c.A343G:p.K115E	exonic	ENSG00000079112	NA	nonsynonymous SNV	ENSG00000079112:ENST00000027335:exon5:c.A343G:p.K115E,ENSG00000079112:ENST00000441892:exon5:c.A343G:p.K115E,ENSG00000079112:ENST00000450165:exon5:c.A343G:p.K115E,ENSG00000079112:ENST00000521491:exon6:c.A343G:p.K115E	Score=489;Name=lod=130	NA	8q22.1	NA	NA	NA	NA	rs2243518	0.77	0.77	0.754	0.802316	0.7753	0.6359	0.7752	0.9531	0.817	0.77	0.61	0.77	0.95	0.7754	0.95	0.68	T	0.0	B	0.001	B	0.000	N	0.996	P	-0.285	N	4.67	T	-0.960	T	0.000	T	0.377	0.481	6.612	4.12	1.546	0.537	4.333	0.481388	NA	0.78	0.78593	0.920109	NA	0.841	NA	7.9967034
852	17	6690161	6690161	C	T	exonic	FBXO39	NA	synonymous SNV	FBXO39:NM_153230:exon3:c.C1086T:p.I362I	exonic	ENSG00000177294	NA	synonymous SNV	ENSG00000177294:ENST00000321535:exon3:c.C1086T:p.I362I	Score=536;Name=lod=201	NA	17p13.1	NA	Name=c-Jun,c-Fos,Pol2,CTCF	Name=101	NA	rs17853331	0.32	0.32	0.318	0.308307	0.2038	0.5823	0.3026	0.1944	0.2914	0.2	0.62	0.26	0.21	0.2561	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.22049	NA	NA	0.211279	0.191557	NA	0.246	NA	7.9954876
852	19	49658367	49658367	C	T	exonic	HRC	NA	nonsynonymous SNV	HRC:NM_002152:exon1:c.G128A:p.S43N	exonic	ENSG00000130528	NA	nonsynonymous SNV	ENSG00000130528:ENST00000252825:exon1:c.G128A:p.S43N,ENSG00000130528:ENST00000595625:exon1:c.G128A:p.S43N	NA	NA	19q13.33	NA	Name=ELF1_(SC-631),CHD2_(N-1250),E2F6_(H-50),TAF1,HMGN3,GABP,HEY1,c-Myc,ZBTB7A_(SC-34508),MafK_(ab50322),TBP,YY1	Name=5	NA	rs3745298	0.44	0.44	0.397	0.471645	0.4274	0.3105	0.5072	0.6029	0.4806	0.42	0.31	0.55	0.56	0.459	0.57	1	T	0.0	B	0.0	B	.	.	1.000	P	-1.67	N	3.21	T	-0.963	T	0.000	T	0.014	-2.384	0.004	0.99	-0.153	0.529	2.545	-2.383829	NA	1	0.451512	0.567862	NA	0.428	NA	7.9954214
852	4	146653620	146653620	G	A	exonic	C4orf51	NA	nonsynonymous SNV	C4orf51:NM_001080531:exon6:c.G517A:p.D173N	exonic	ENSG00000237136	NA	nonsynonymous SNV	ENSG00000237136:ENST00000438731:exon6:c.G517A:p.D173N	NA	NA	4q31.21	NA	NA	NA	NA	rs10008599	0.09	0.09	0.082	0.0770767	0.1183	0.001	0.0778	0.1362	0.0327	0.12	0.0017	0.09	0.13	0.0981	0.13	0	D	0.059	B	0.008	B	.	.	1.000	P	0.695	N	.	.	-1.052	T	0.001	T	0.086	3.046	16.17	-0.356	-0.097	-0.031	2.384	3.04614	3.04614	0	0.12157	0.120234	NA	0.072	NA	7.9953634
852	14	50472405	50472405	G	A	exonic	C14orf182	NA	nonsynonymous SNV	C14orf182:NM_001012706:exon1:c.C113T:p.P38L	exonic	ENSG00000214900	NA	nonsynonymous SNV	ENSG00000214900:ENST00000399206:exon1:c.C113T:p.P38L	NA	NA	14q21.3	NA	NA	NA	NA	rs6572635	0.25	0.25	0.256	0.295727	0.2773	0.124	0.317	0.3873	0.3528	0.27	0.14	0.29	0.34	0.2933	0.37	0	D	0.552	P	0.096	B	.	.	1.000	P	.	.	0.01	T	-1.001	T	0.000	T	0.047	1.386	10.57	1.72	0.492	0.925	4.361	1.385916	1.385916	0	0.267431	0.372919	NA	0.217	NA	7.9953024
852	10	96039597	96039597	G	C	exonic	PLCE1	NA	nonsynonymous SNV	PLCE1:NM_001165979:exon19:c.G3800C:p.R1267P,PLCE1:NM_016341:exon20:c.G4724C:p.R1575P	exonic	ENSG00000138193	NA	nonsynonymous SNV	ENSG00000138193:ENST00000371375:exon19:c.G3800C:p.R1267P,ENSG00000138193:ENST00000371380:exon19:c.G4724C:p.R1575P,ENSG00000138193:ENST00000371385:exon19:c.G3800C:p.R1267P,ENSG00000138193:ENST00000260766:exon20:c.G4724C:p.R1575P	NA	NA	10q23.33	Score=805;Name=V$IRF7_01	NA	NA	NA	rs2274224	0.47	0.47	0.506	0.486222	0.4563	0.5377	0.3487	0.5893	0.4223	0.43	0.49	0.37	0.57	0.4378	0.58	0.38	T	0.0	B	0.0	B	0.165	N	1.000	P	-0.345	N	1.92	T	-0.950	T	0.000	T	0.067	-0.225	2.913	4.64	0.920	0.795	6.471	-0.224866	NA	0.46	0.443945	0.545407	NA	0.5	NA	7.9952884
853	19	54783375	54783375	T	A	exonic	LILRB2	NA	nonsynonymous SNV	LILRB2:NM_001080978:exon5:c.A483T:p.E161D,LILRB2:NM_005874:exon5:c.A483T:p.E161D	exonic	ENSG00000131042	NA	nonsynonymous SNV	ENSG00000131042:ENST00000391746:exon4:c.A483T:p.E161D,ENSG00000131042:ENST00000434421:exon4:c.A135T:p.E45D,ENSG00000131042:ENST00000314446:exon5:c.A483T:p.E161D,ENSG00000131042:ENST00000391748:exon5:c.A483T:p.E161D,ENSG00000131042:ENST00000391749:exon5:c.A483T:p.E161D	NA	NA	19q13.42	NA	NA	NA	NA	rs373032	0.81	0.81	0.857	0.844649	0.7634	0.9147	0.8501	0.9554	0.7025	0.72	0.91	0.78	0.84	0.8001	0.94	1	T	0.0	B	0.0	B	0.083	N	1.000	P	-1.05	N	5.76	T	-0.961	T	0.000	T	0.182	-1.153	0.101	-5.16	-1.380	-2.615	0.905	-1.152674	NA	1	0.775012	0.943713	NA	0.841	NA	7.9948214
853	14	45650900	45650900	A	G	exonic	FANCM	NA	nonsynonymous SNV	FANCM:NM_020937:exon16:c.A4378G:p.I1460V	exonic	ENSG00000187790	NA	nonsynonymous SNV	ENSG00000187790:ENST00000556250:exon9:c.A2926G:p.I976V,ENSG00000187790:ENST00000542564:exon15:c.A4300G:p.I1434V,ENSG00000187790:ENST00000267430:exon16:c.A4378G:p.I1460V	NA	NA	14q21.2	NA	Name=c-Fos	NA	NA	rs78211950	0.09	0.09	0.081	0.101438	0.1153	0.1181	0.1081	0.0068	0.1933	0.13	0.12	0.09	0.01	0.12	0.13	0.5	T	0.039	B	0.011	B	0.467	N	1.000	P	0	N	3.07	T	-1.016	T	0.000	T	0.06	-1.783	0.01	-1.19	-0.054	-0.191	0.810	-1.782821	NA	1	0.103284	0.022923	NA	0.101	NA	7.9947494
853	19	18305824	18305824	C	T	exonic	MPV17L2	NA	synonymous SNV	MPV17L2:NM_032683:exon4:c.C492T:p.P164P	exonic	ENSG00000254858	NA	nonsynonymous SNV	ENSG00000254858:ENST00000534474:exon3:c.C415T:p.P139S	Score=581;Name=lod=307	NA	19p13.11	NA	Name=Nrf1	Name=84	NA	rs2271881	0.25	0.25	0.269	0.244808	0.3539	0.0685	0.3184	0.2708	0.227	0.35	0.07	0.32	0.27	0.3024	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.622908	1.622908	0	0.350511	0.26949	NA	0.29	NA	7.993189
853	9	8486355	8486355	G	A	intronic	PTPRD	NA	NA	NA	intronic	ENSG00000153707	NA	NA	NA	Score=506;Name=lod=152	NA	9p24.1	Score=759;Name=V$STAT1_01	Name=Rad21,CTCF	Name=60	NA	rs183119115	0.0014	0.0014	NA	0.000798722	0.002	NA	0.0029	NA	NA	0.0026	NA	0.0028	NA	0.002	0.0031	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.721811	NA	NA	0.00314	0.000454	NA	0.014	NA	7.99286
853	11	17809639	17809639	C	T	exonic	SERGEF	NA	nonsynonymous SNV	SERGEF:NM_012139:exon11:c.G1370A:p.G457E	exonic	ENSG00000129158	NA	nonsynonymous SNV	ENSG00000129158:ENST00000265965:exon11:c.G1370A:p.G457E	NA	NA	11p15.1	NA	NA	NA	NA	rs10788	0.1	0.1	0.093	0.127196	0.1233	0.002	0.0663	0.2156	0.184	0.13	0.0017	0.07	0.18	0.1082	0.18	0.04	D	0.0	B	0.001	B	0.748	N	1.000	P	0.805	L	0.77	T	-1.054	T	0.000	T	0.094	3.259	16.93	-0.839	-0.059	-0.662	5.124	3.259426	3.259426	0	0.109131	0.174318	NA	0.109	NA	7.9927024
853	11	6789294	6789294	G	C	exonic	OR2AG2	NA	nonsynonymous SNV	OR2AG2:NM_001004490:exon1:c.C895G:p.R299G	exonic	ENSG00000188124	NA	nonsynonymous SNV	ENSG00000188124:ENST00000338569:exon1:c.C895G:p.R299G	NA	NA	11p15.4	NA	NA	NA	NA	rs7924459	0.19	0.19	0.207	0.25619	0.1024	0.1538	0.0836	0.4887	0.3282	0.11	0.13	0.1	0.47	0.1439	0.47	1	T	0.0	B	0.0	B	0.003	N	1.000	P	0.04	N	1.1	T	-0.920	T	0.000	T	0.038	-3.319	0.001	2.45	0.364	-0.617	8.264	-3.318776	NA	1	0.09602	0.42617	NA	0.283	NA	7.9910134
853	3	42733468	42733468	T	C	exonic	KLHL40	NA	nonsynonymous SNV	KLHL40:NM_152393:exon6:c.T1849C:p.C617R	exonic	ENSG00000157119	NA	nonsynonymous SNV	ENSG00000157119:ENST00000287777:exon6:c.T1849C:p.C617R	Score=519;Name=lod=171	NA	3p22.1	NA	NA	NA	NA	rs123509	0.88	0.88	0.891	0.89976	0.7714	0.998	0.8689	0.9448	0.8916	0.77	1	0.86	0.94	0.8168	1	1	T	0.0	B	0.0	B	0.000	N	0.009	P	-1.895	N	-0.36	T	-0.961	T	0.000	T	0.11	-2.547	0.003	3.29	0.685	1.237	7.379	-2.546536	NA	1	0.754302	0.904448	NA	0.899	NA	7.9908314
853	5	140725828	140725828	C	T	exonic	PCDHGA3	NA	nonsynonymous SNV	PCDHGA3:NM_018916:exon1:c.C2228T:p.A743V,PCDHGA3:NM_032011:exon1:c.C2228T:p.A743V	exonic	ENSG00000254245	NA	nonsynonymous SNV	ENSG00000254245:ENST00000253812:exon1:c.C2228T:p.A743V	Score=522;Name=lod=176	NA	5q31.3	NA	NA	NA	NA	rs7736541	0.53	0.53	0.493	0.540935	0.4274	0.3264	0.6297	0.8495	0.3988	0.45	0.34	0.61	0.8	0.4794	0.8	1	T	0.0	B	0.001	B	0.392	N	0.000	P	-3.215	N	1.0	T	-0.945	T	0.000	T	0.012	0.07	4.381	4.14	0.399	0.472	5.563	0.070226	NA	1	0.437326	0.79369	NA	0.565	NA	7.9892074
853	19	51919998	51919998	T	C	exonic	SIGLEC10	NA	nonsynonymous SNV	SIGLEC10:NM_001171156:exon3:c.A454G:p.N152D,SIGLEC10:NM_001171157:exon3:c.A628G:p.N210D,SIGLEC10:NM_001171158:exon3:c.A484G:p.N162D,SIGLEC10:NM_001171159:exon3:c.A454G:p.N152D,SIGLEC10:NM_001171161:exon3:c.A454G:p.N152D,SIGLEC10:NM_033130:exon3:c.A628G:p.N210D	exonic	ENSG00000142512	NA	nonsynonymous SNV	ENSG00000142512:ENST00000529627:exon2:c.A70G:p.N24D,ENSG00000142512:ENST00000339313:exon3:c.A628G:p.N210D,ENSG00000142512:ENST00000353836:exon3:c.A628G:p.N210D,ENSG00000142512:ENST00000356298:exon3:c.A628G:p.N210D,ENSG00000142512:ENST00000436984:exon3:c.A484G:p.N162D,ENSG00000142512:ENST00000439889:exon3:c.A454G:p.N152D,ENSG00000142512:ENST00000441969:exon3:c.A454G:p.N152D,ENSG00000142512:ENST00000442846:exon3:c.A454G:p.N152D,ENSG00000142512:ENST00000525998:exon3:c.A628G:p.N210D,ENSG00000142512:ENST00000530476:exon3:c.A529G:p.N177D	NA	NA	19q13.41	NA	NA	NA	NA	rs61741677	0.06	0.06	0.042	0.0838658	0.1233	0.0645	0.0793	0.0325	0.136	0.09	0.04	0.07	0.01	0.1065	0.11	0.63	T	0.012	B	0.012	B	0.172	N	1.000	P	0.09	N	-1.02	T	-0.982	T	0.011	T	0.089	0.709	7.781	-0.23	-0.499	-1.379	7.973	0.709455	NA	0.81	0.114419	0.036314	NA	0.051	NA	7.9891144
853	19	37038092	37038092	T	C	exonic	ZNF529	NA	synonymous SNV	ZNF529:NM_001145650:exon5:c.A1314G:p.G438G,ZNF529:NM_020951:exon5:c.A1368G:p.G456G,ZNF529:NM_001145649:exon6:c.A1368G:p.G456G	exonic	ENSG00000186020	NA	synonymous SNV	ENSG00000186020:ENST00000591340:exon5:c.A1368G:p.G456G,ENSG00000186020:ENST00000334116:exon6:c.A1053G:p.G351G	Score=300;Name=lod=22	NA	19q13.12	NA	Name=KAP1,SETDB1	Name=56	NA	rs2278168	0.23	0.23	0.218	0.22504	0.2425	0.1756	0.1916	0.2791	0.2086	0.25	0.18	0.2	0.26	0.2187	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.76469	NA	NA	0.216437	0.2529	NA	0.297	NA	7.9890296
853	15	89398605	89398605	G	T	exonic	ACAN	NA	nonsynonymous SNV	ACAN:NM_001135:exon12:c.G2789T:p.S930I,ACAN:NM_013227:exon12:c.G2789T:p.S930I	exonic	ENSG00000157766	NA	nonsynonymous SNV	ENSG00000157766:ENST00000561243:exon11:c.G2789T:p.S930I,ENSG00000157766:ENST00000352105:exon12:c.G2789T:p.S930I,ENSG00000157766:ENST00000439576:exon12:c.G2789T:p.S930I,ENSG00000157766:ENST00000559004:exon12:c.G2789T:p.S930I	NA	NA	15q26.1	NA	NA	NA	NA	rs938608	0.46	0.46	0.471	0.452676	0.6531	0.2421	0.3919	0.4463	0.5153	0.67	0.2	0.47	0.43	0.543	0.67	0.44	T	0.967	D	0.84	P	0.741	N	1.000	P	1.845	L	4.52	T	-0.957	T	0.000	T	0.082	1.434	10.74	-3.45	-0.466	-0.823	1.909	1.43407	1.43407	0.37	0.648511	0.486849	ID=COSM146361;OCCURENCE=1(stomach)	0.464	NA	7.9887224
853	4	2307121	2307121	G	A	exonic	ZFYVE28	NA	nonsynonymous SNV	ZFYVE28:NM_001172656:exon7:c.C856T:p.P286S,ZFYVE28:NM_001172659:exon8:c.C736T:p.P246S,ZFYVE28:NM_020972:exon8:c.C946T:p.P316S	exonic	ENSG00000159733	NA	nonsynonymous SNV	ENSG00000159733:ENST00000511071:exon7:c.C856T:p.P286S,ENSG00000159733:ENST00000290974:exon8:c.C946T:p.P316S,ENSG00000159733:ENST00000515312:exon8:c.C736T:p.P246S	NA	NA	4p16.3	Score=765;Name=V$PAX5_02	NA	NA	NA	rs61742112	0.06	0.06	0.063	0.0421326	0.1272	NA	0.0663	0.0091	0.0256	0.13	NA	0.1	0.02	0.0891	0.13	0.22	T	0.003	B	0.007	B	0.015	N	0.002	P	1.5	L	0.37	T	-1.099	T	0.001	T	0.065	-0.262	2.74	1.12	0.007	0.232	3.656	-0.262423	NA	0.28	0.128781	0.027009	NA	0.051	NA	7.9882524
853	13	21063524	21063524	A	G	exonic	CRYL1	NA	synonymous SNV	CRYL1:NM_015974:exon3:c.T261C:p.G87G	exonic	ENSG00000165475	NA	synonymous SNV	ENSG00000165475:ENST00000298248:exon3:c.T261C:p.G87G,ENSG00000165475:ENST00000382812:exon4:c.T195C:p.G65G	Score=422;Name=lod=69	NA	13q12.11	NA	Name=CTCF,Rad21,SMC3_(ab9263),TCF12,CTCF_(C-20),Pbx3,CTCF_(SC-5916)	Name=34	NA	rs14236	0.25	0.25	0.262	0.270367	0.2217	0.1389	0.1988	0.5008	0.1953	0.23	0.1	0.23	0.48	0.2292	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.162119	NA	NA	0.227772	0.419259	NA	0.399	NA	7.9879946
853	12	121435475	121435475	G	A	intronic	HNF1A	NA	NA	NA	exonic	ENSG00000135100	NA	nonsynonymous SNV	ENSG00000135100:ENST00000535955:exon2:c.G224A:p.R75H,ENSG00000135100:ENST00000538626:exon2:c.G254A:p.R85H,ENSG00000135100:ENST00000400024:exon7:c.G1508A:p.R503H	NA	NA	12q24.31	NA	NA	NA	NA	rs2464195	0.37	0.37	0.352	0.359625	0.3777	0.4802	0.3963	0.1263	0.5061	0.37	0.52	0.42	0.14	0.4347	0.52	0.15	T	0.0	B	0.001	B	.	.	1.000	P	.	.	.	.	-1.027	T	0.000	T	.	-0.974	0.301	-8.98	-3.672	-0.240	13.207	-0.97384	NA	0.02	0.366364	0.141171	NA	0.319	CLINSIG=probable-non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000117228.3|RCV000125375.1;CLNDSDB=.|.;CLNDSDBID=.|.	7.9879027
853	2	220100787	220100787	C	T	exonic	ANKZF1	NA	nonsynonymous SNV	ANKZF1:NM_001042410:exon13:c.C2027T:p.P676L,ANKZF1:NM_018089:exon13:c.C2027T:p.P676L	exonic	ENSG00000163516	NA	nonsynonymous SNV	ENSG00000163516:ENST00000409849:exon10:c.C1397T:p.P466L,ENSG00000163516:ENST00000323348:exon13:c.C2027T:p.P676L,ENSG00000163516:ENST00000410034:exon13:c.C2027T:p.P676L	NA	NA	2q35	NA	NA	NA	NA	rs2293079	0.08	0.08	0.077	0.076278	0.1163	0.0397	0.0951	0.0499	0.0951	0.11	0.04	0.12	0.06	0.1048	0.12	0.04	D	0.0	B	0.0	B	0.761	N	1.000	P	0.69	N	1.87	T	-1.021	T	0.001	T	0.015	-0.472	1.822	0.449	0.260	-0.168	5.033	-0.472009	NA	0.06	0.12503	0.054041	NA	0.138	NA	7.9872034
853	19	9085958	9085958	A	G	exonic	MUC16	NA	nonsynonymous SNV	MUC16:NM_024690:exon1:c.T5857C:p.S1953P	exonic	ENSG00000181143	NA	nonsynonymous SNV	ENSG00000181143:ENST00000397910:exon1:c.T5857C:p.S1953P	NA	NA	19p13.2	NA	NA	NA	NA	rs1108380	0.15	0.15	0.134	0.146366	0.1252	0.1746	0.0965	0.1573	0.1595	0.12	0.16	0.11	0.19	0.1223	0.19	0	D	0.945	P	0.82	P	.	.	.	.	0	N	4.19	T	-0.828	T	0.000	T	0.077	0.578	7.12	0.235	0.263	-0.580	.	0.577749	NA	0.28	0.09865	0.127212	NA	0.094	NA	7.9871834
853	3	48422235	48422235	T	A	exonic	FBXW12	NA	nonsynonymous SNV	FBXW12:NM_001159927:exon7:c.T608A:p.V203D,FBXW12:NM_001159929:exon7:c.T761A:p.V254D,FBXW12:NM_207102:exon8:c.T818A:p.V273D	exonic	ENSG00000164049	NA	nonsynonymous SNV	ENSG00000164049:ENST00000436231:exon5:c.T347A:p.V116D,ENSG00000164049:ENST00000415155:exon7:c.T608A:p.V203D,ENSG00000164049:ENST00000445170:exon7:c.T761A:p.V254D,ENSG00000164049:ENST00000296438:exon8:c.T818A:p.V273D	NA	NA	3p21.31	NA	NA	NA	NA	rs6784322	0.37	0.37	0.368	0.353834	0.4702	0.3373	0.3703	0.3018	0.3098	0.46	0.33	0.37	0.27	0.4037	0.47	0.39	T	0.039	B	0.048	B	0.108	N	1.000	P	-0.695	N	3.5	T	-1.051	T	0.000	T	0.081	0.966	8.943	-6.75	-1.581	-0.749	2.717	0.966403	NA	0.15	0.472791	0.332501	NA	0.442	NA	7.9866424
853	16	1608082	1608082	A	G	exonic	IFT140	NA	synonymous SNV	IFT140:NM_014714:exon19:c.T2253C:p.P751P	exonic	ENSG00000187535	NA	synonymous SNV	ENSG00000187535:ENST00000426508:exon19:c.T2253C:p.P751P	Score=477;Name=lod=116	NA	16p13.3	Score=843;Name=V$TAL1BETAE47_01	NA	NA	NA	rs2076436	0.31	0.31	0.324	0.347444	0.2087	0.3433	0.1844	0.5507	0.3354	0.22	0.32	0.22	0.53	0.2563	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.232296	NA	NA	0.216395	0.485448	ID=COSM148006;OCCURENCE=1(stomach)	0.319	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117258.2;CLNDSDB=.;CLNDSDBID=.	7.9852716
854	7	1482101	1482101	C	G	exonic	MICALL2	NA	nonsynonymous SNV	MICALL2:NM_182924:exon7:c.G1438C:p.A480P	exonic	ENSG00000164877	NA	nonsynonymous SNV	ENSG00000164877:ENST00000405088:exon3:c.G802C:p.A268P,ENSG00000164877:ENST00000413446:exon6:c.G1312C:p.A438P,ENSG00000164877:ENST00000297508:exon7:c.G1438C:p.A480P	NA	NA	7p22.3	Score=842;Name=V$ELK1_01	NA	NA	NA	rs12540098	0.21	0.21	0.191	0.206669	0.1054	0.0397	0.2925	0.4486	0.0951	0.11	0.06	0.27	0.47	0.1509	0.47	0.28	T	0.0	B	0.0	B	0.749	N	1.000	P	-0.895	N	2.53	T	-0.981	T	0.000	T	0.312	-1.717	0.011	0.38	-0.513	-0.597	3.708	-1.716954	NA	0.29	0.092674	0.37222	NA	0.239	NA	7.9843594
854	3	64142859	64142859	C	T	exonic	PRICKLE2	NA	synonymous SNV	PRICKLE2:NM_198859:exon5:c.G579A:p.P193P	exonic	ENSG00000163637	NA	synonymous SNV	ENSG00000163637:ENST00000295902:exon5:c.G579A:p.P193P,ENSG00000163637:ENST00000564377:exon6:c.G747A:p.P249P	NA	NA	3p14.1	NA	Name=GATA3_(SC-268),GATA-2	Name=5	NA	rs17720698	0.19	0.19	0.195	0.184904	0.2525	0.0119	0.1282	0.295	0.1851	0.26	0.01	0.15	0.3	0.2022	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.895512	NA	NA	0.229419	0.267136	NA	0.268	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118060.2;CLNDSDB=.;CLNDSDBID=.	7.9825476
854	12	18234256	18234256	T	C	exonic	RERGL	NA	nonsynonymous SNV	RERGL:NM_024730:exon6:c.A487G:p.M163V	exonic	ENSG00000111404	NA	nonsynonymous SNV	ENSG00000111404:ENST00000538724:exon5:c.A484G:p.M162V,ENSG00000111404:ENST00000229002:exon6:c.A487G:p.M163V	Score=481;Name=lod=120	NA	12p12.3	NA	NA	NA	NA	rs941048	0.08	0.08	0.07	0.0828674	0.1322	0.002	0.0793	0.1021	0.092	0.11	NA	0.1	0.1	0.0987	0.12	0.1	T	0.0	B	0.001	B	0.174	N	0.000	P	-0.46	N	-1.26	T	-1.082	T	0.003	T	0.03	1.464	10.84	-0.171	0.353	0.052	0.394	1.463589	1.463589	0.99	0.120698	0.118248	NA	0.167	NA	7.9817354
854	8	143996539	143996539	T	C	exonic	CYP11B2	NA	nonsynonymous SNV	CYP11B2:NM_000498:exon3:c.A518G:p.K173R	exonic	ENSG00000179142	NA	nonsynonymous SNV	ENSG00000179142:ENST00000323110:exon3:c.A518G:p.K173R	NA	NA	8q24.3	NA	NA	NA	NA	rs4539	0.36	0.36	0.275	0.346446	0.4841	0.2867	0.4697	0.1876	0.3937	0.48	0.31	0.43	0.19	0.4189	0.48	0.9	T	0.0	B	0.001	B	0.894	N	1.000	P	0.6	N	-0.24	T	-0.999	T	0.000	T	0.012	-1.971	0.007	-4.17	-1.541	-0.668	6.526	-1.971021	NA	0.63	0.448906	0.235588	NA	NA	NA	7.9814274
854	19	52033158	52033158	C	T	exonic	SIGLEC6	NA	nonsynonymous SNV	SIGLEC6:NM_001177547:exon4:c.G676A:p.G226S,SIGLEC6:NM_198845:exon4:c.G784A:p.G262S,SIGLEC6:NM_001177548:exon5:c.G865A:p.G289S,SIGLEC6:NM_001177549:exon5:c.G799A:p.G267S,SIGLEC6:NM_001245:exon5:c.G832A:p.G278S,SIGLEC6:NM_198846:exon5:c.G832A:p.G278S	exonic	ENSG00000105492	NA	nonsynonymous SNV	ENSG00000105492:ENST00000346477:exon4:c.G784A:p.G262S,ENSG00000105492:ENST00000436458:exon4:c.G676A:p.G226S,ENSG00000105492:ENST00000343300:exon5:c.G832A:p.G278S,ENSG00000105492:ENST00000359982:exon5:c.G865A:p.G289S,ENSG00000105492:ENST00000391797:exon5:c.G799A:p.G267S,ENSG00000105492:ENST00000425629:exon5:c.G832A:p.G278S	Score=340;Name=lod=32	NA	19q13.41	NA	NA	NA	NA	rs35931837	0.08	0.08	0.048	0.0734824	0.1183	0.002	0.2363	0.0038	0.0798	0.14	NA	0.2	0.01	0.1246	0.2	1	T	0.024	B	0.004	B	0.043	N	0.936	P	-0.325	N	-1.29	T	-1.088	T	0.000	T	0.36	-1.692	0.011	1.55	0.150	-0.302	5.337	-1.691978	NA	1	0.10907	0.02634	NA	0.043	NA	7.9813634
854	19	47282162	47282162	G	A	exonic	SLC1A5	NA	synonymous SNV	SLC1A5:NM_001145145:exon4:c.C222T:p.Y74Y,SLC1A5:NM_001145144:exon5:c.C144T:p.Y48Y,SLC1A5:NM_005628:exon5:c.C828T:p.Y276Y	exonic	ENSG00000105281	NA	synonymous SNV	ENSG00000105281:ENST00000434726:exon4:c.C222T:p.Y74Y,ENSG00000105281:ENST00000594991:exon4:c.C300T:p.Y100Y,ENSG00000105281:ENST00000412532:exon5:c.C144T:p.Y48Y,ENSG00000105281:ENST00000542575:exon5:c.C828T:p.Y276Y	Score=403;Name=lod=58	NA	19q13.32	NA	Name=Pol2(b),GR	Name=9	NA	rs2070246	0.32	0.32	0.302	0.334065	0.2177	0.2629	0.4294	0.4463	0.3078	0.21	0.28	0.4	0.48	0.2614	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.596646	NA	NA	0.206744	0.430322	NA	0.333	NA	7.9808226
854	19	49621964	49621964	T	C	exonic	C19orf73	NA	nonsynonymous SNV	C19orf73:NM_018111:exon1:c.A316G:p.S106G	exonic	ENSG00000221916	NA	nonsynonymous SNV	ENSG00000221916:ENST00000408991:exon1:c.A316G:p.S106G	NA	NA	19q13.33	NA	Name=TAF1,Pol2,NRSF,TCF4,BAF170,BAF155,Egr-1,Pol2-4H8,HEY1,TBP	Name=104	NA	rs2232003	0.7	0.7	0.683	0.698482	0.8022	0.5327	0.6614	0.7776	0.682	0.79	0.52	0.72	0.78	0.7543	0.8	0	D	0.0	B	0.0	B	.	.	1.000	P	0	N	0.59	T	-1.018	T	0.000	T	0.014	1.258	10.1	0.441	-0.021	-0.111	3.870	1.258363	1.258363	NA	0.797233	0.745775	NA	0.768	NA	7.9796004
854	12	96292170	96292170	C	G	exonic	CCDC38	NA	nonsynonymous SNV	CCDC38:NM_182496:exon7:c.G607C:p.V203L	exonic	ENSG00000165972	NA	nonsynonymous SNV	ENSG00000165972:ENST00000344280:exon7:c.G607C:p.V203L	NA	NA	12q23.1	NA	Name=JunD	NA	NA	rs75959092	0.06	0.06	0.052	0.0563099	0.1342	0.0278	0.0706	0.0045	0.0654	0.13	0.02	0.07	0.01	0.0949	0.13	0.83	T	0.08	B	0.046	B	0.017	N	0.992	P	0.865	L	3.17	T	-0.943	T	0.000	T	0.039	0.35	5.9	0.671	0.055	-0.125	4.764	0.350137	NA	0.05	0.124767	0.02315	NA	0.036	NA	7.9794664
854	19	3551125	3551125	C	T	exonic	MFSD12	NA	synonymous SNV	MFSD12:NM_001042680:exon2:c.G366A:p.T122T,MFSD12:NM_021731:exon2:c.G366A:p.T122T,MFSD12:NM_174983:exon2:c.G366A:p.T122T	exonic	ENSG00000161091	NA	nonsynonymous SNV	ENSG00000161091:ENST00000585814:exon2:c.G97A:p.A33T	NA	NA	19p13.3	Score=808;Name=V$PAX5_01	Name=Pol2	NA	NA	rs61733854	0.0023	0.0023	NA	0.00159744	0.007	NA	0.0014	NA	NA	0.01	NA	NA	NA	0.0069	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.060997	NA	NA	0.006691	0.001705	NA	NA	NA	7.979409
854	10	105657363	105657363	C	G	exonic	OBFC1	NA	synonymous SNV	OBFC1:NM_024928:exon7:c.G696C:p.V232V	exonic	ENSG00000107960	NA	synonymous SNV	ENSG00000107960:ENST00000369764:exon6:c.G696C:p.V232V,ENSG00000107960:ENST00000224950:exon7:c.G696C:p.V232V	Score=272;Name=lod=17	NA	10q24.33	NA	Name=CTCF	Name=27	NA	rs11191853	0.21	0.21	0.216	0.188099	0.2545	0.1577	0.2046	0.2035	0.1186	0.26	0.16	0.2	0.21	0.2004	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.52495	NA	NA	0.233372	0.217204	NA	0.159	NA	7.9783946
854	5	176636882	176636882	C	T	exonic	NSD1	NA	synonymous SNV	NSD1:NM_022455:exon5:c.C1482T:p.C494C,NSD1:NM_172349:exon6:c.C675T:p.C225C	exonic	ENSG00000165671	NA	synonymous SNV	ENSG00000165671:ENST00000361032:exon2:c.C1173T:p.C391C,ENSG00000165671:ENST00000439151:exon5:c.C1482T:p.C494C,ENSG00000165671:ENST00000347982:exon6:c.C675T:p.C225C,ENSG00000165671:ENST00000354179:exon6:c.C675T:p.C225C	Score=561;Name=lod=253	NA	5q35.3	NA	NA	Name=3	NA	rs1363405	0.41	0.41	0.441	0.468051	0.1988	0.5298	0.3343	0.7693	0.3691	0.2	0.52	0.32	0.69	0.2999	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.265803	NA	NA	0.190116	0.674308	NA	0.428	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000082100.1;CLNDSDB=.;CLNDSDBID=.	7.9778506
854	1	234744250	234744250	G	A	exonic	IRF2BP2	NA	synonymous SNV	IRF2BP2:NM_001077397:exon1:c.C991T:p.L331L,IRF2BP2:NM_182972:exon1:c.C991T:p.L331L	exonic	ENSG00000168264	NA	synonymous SNV	ENSG00000168264:ENST00000366609:exon1:c.C991T:p.L331L,ENSG00000168264:ENST00000366610:exon1:c.C991T:p.L331L	Score=683;Name=lod=797	NA	1q42.3	NA	Name=CTCF,CTCF_(C-20),Rad21,Sin3Ak-20,E2F6,Pol2-4H8,Pol2,CTCF_(SC-5916),Pol2(phosphoS2),SMC3_(ab9263),HMGN3,GATA-1,E2F6_(H-50)	Name=148	NA	rs8722	0.18	0.18	0.172	0.135783	0.2455	0.2034	0.1398	0.0129	0.1166	0.23	0.24	0.17	0.02	0.2129	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.411443	1.411443	NA	0.230581	0.045207	NA	0.174	NA	7.9776856
854	19	9090182	9090182	T	C	exonic	MUC16	NA	nonsynonymous SNV	MUC16:NM_024690:exon1:c.A1633G:p.T545A	exonic	ENSG00000181143	NA	nonsynonymous SNV	ENSG00000181143:ENST00000397910:exon1:c.A1633G:p.T545A	NA	NA	19p13.2	NA	NA	NA	NA	rs17000957	0.16	0.16	0.144	0.157548	0.1262	0.1746	0.17	0.1604	0.1595	0.12	0.16	0.17	0.2	0.1304	0.2	0	D	0.334	B	0.039	B	.	.	.	.	0	N	4.35	T	-0.902	T	0.000	T	0.034	0.187	5.007	-1.35	-0.480	-0.209	2.127	0.186913	NA	0	0.099762	0.128906	NA	0.094	NA	7.9769714
854	5	176721272	176721272	G	C	exonic	NSD1	NA	synonymous SNV	NSD1:NM_022455:exon23:c.G6903C:p.G2301G,NSD1:NM_172349:exon24:c.G6096C:p.G2032G	exonic	ENSG00000165671	NA	synonymous SNV	ENSG00000165671:ENST00000361032:exon20:c.G6594C:p.G2198G,ENSG00000165671:ENST00000439151:exon23:c.G6903C:p.G2301G,ENSG00000165671:ENST00000347982:exon24:c.G6096C:p.G2032G,ENSG00000165671:ENST00000354179:exon24:c.G6096C:p.G2032G	Score=422;Name=lod=69	NA	5q35.3	Score=914;Name=V$AP1_Q6	NA	NA	NA	rs11740250	0.12	0.12	0.105	0.108027	0.2475	NA	0.1455	0.0106	0.181	0.25	NA	0.19	0.01	0.1915	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.043522	NA	NA	0.25093	0.041761	NA	0.196	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000082139.1;CLNDSDB=.;CLNDSDBID=.	7.9767366
854	1	111957311	111957311	G	C	exonic	OVGP1	NA	nonsynonymous SNV	OVGP1:NM_002557:exon11:c.C1812G:p.H604Q	exonic	ENSG00000085465	NA	nonsynonymous SNV	ENSG00000085465:ENST00000369732:exon11:c.C1812G:p.H604Q	NA	NA	1p13.2	NA	NA	NA	NA	rs10067	0.26	0.26	0.256	0.294928	0.1103	0.3919	0.1628	0.4539	0.2638	0.11	0.42	0.16	0.38	0.1649	0.42	0.02	D	0.005	B	0.005	B	0.000	N	1.000	P	0.345	N	3.7	T	-0.918	T	0.004	T	0.027	0.421	6.288	0.215	0.059	-0.609	4.005	0.4212	NA	0.07	0.082442	0.385837	ID=COSM146579;OCCURENCE=1(stomach)	0.239	NA	7.9756914
855	22	18209920	18209920	C	T	exonic	BCL2L13	NA	nonsynonymous SNV	BCL2L13:NM_001270733:exon2:c.C238T:p.P80S,BCL2L13:NM_001270727:exon5:c.C1006T:p.P336S,BCL2L13:NM_001270730:exon5:c.C592T:p.P198S,BCL2L13:NM_001270726:exon6:c.C1150T:p.P384S,BCL2L13:NM_001270729:exon6:c.C592T:p.P198S,BCL2L13:NM_001270731:exon6:c.C592T:p.P198S,BCL2L13:NM_015367:exon7:c.C1078T:p.P360S	exonic	ENSG00000099968	NA	nonsynonymous SNV	ENSG00000099968:ENST00000538149:exon4:c.C706T:p.P236S,ENSG00000099968:ENST00000337612:exon5:c.C592T:p.P198S,ENSG00000099968:ENST00000543133:exon6:c.C592T:p.P198S,ENSG00000099968:ENST00000317582:exon7:c.C1078T:p.P360S	NA	NA	22q11.21	NA	NA	Name=11	NA	rs9306198	0.07	0.07	0.072	0.0513179	0.1352	NA	0.1009	0.0106	0.0378	0.13	NA	0.12	0.01	0.0938	0.13	0.14	T	0.01	B	0.003	B	0.447	N	1.000	P	1.245	L	2.07	T	-1.068	T	0.001	T	0.062	2.139	13.11	-0.241	-0.023	0.300	5.835	2.138567	2.138567	0	0.130349	0.023831	NA	0.109	NA	7.9739844
855	9	100819192	100819192	C	T	exonic	NANS	NA	synonymous SNV	NANS:NM_018946:exon1:c.C102T:p.D34D	exonic	ENSG00000095380	NA	synonymous SNV	ENSG00000095380:ENST00000210444:exon1:c.C102T:p.D34D	Score=691;Name=lod=858	NA	9q22.33	NA	Name=HEY1,c-Myc,CCNT2,Pol2(b),YY1,Pol2-4H8,Sin3Ak-20,HA-E2F1,Oct-2,ETS1,HMGN3,POU2F2,Pol2	Name=68	NA	rs3739670	0.28	0.28	0.29	0.391773	0.2068	0.124	0.2622	0.6778	0.5634	0.2	0.1	0.21	0.65	0.2911	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.005164	2.005164	NA	0.197371	0.615175	NA	0.283	NA	7.9713956
855	5	76734084	76734084	C	T	exonic	WDR41	NA	nonsynonymous SNV	WDR41:NM_018268:exon10:c.G985A:p.V329I	exonic	ENSG00000164253	NA	nonsynonymous SNV	ENSG00000164253:ENST00000507654:exon4:c.G298A:p.V100I,ENSG00000164253:ENST00000414719:exon8:c.G223A:p.V75I,ENSG00000164253:ENST00000507029:exon8:c.G820A:p.V274I,ENSG00000164253:ENST00000515253:exon8:c.G790A:p.V264I,ENSG00000164253:ENST00000296679:exon10:c.G985A:p.V329I	Score=477;Name=lod=116	NA	5q13.3	NA	NA	NA	NA	rs33204	0.5	0.5	0.507	0.528355	0.4205	0.4603	0.611	0.6362	0.5051	0.4	0.47	0.59	0.65	0.4881	0.65	0.22	T	0.001	B	0.001	B	0.003	N	1.000	P	-0.21	N	0.14	T	-0.911	T	0.000	T	0.204	-1.049	0.196	-2.41	-0.623	0.529	12.808	-1.048825	NA	1	0.453721	0.587835	NA	0.551	NA	7.9710124
855	10	135000159	135000159	A	G	exonic	KNDC1	NA	nonsynonymous SNV	KNDC1:NM_152643:exon6:c.A1307G:p.E436G	exonic	ENSG00000171798	NA	nonsynonymous SNV	ENSG00000171798:ENST00000368571:exon5:c.A1112G:p.E371G,ENSG00000171798:ENST00000304613:exon6:c.A1307G:p.E436G,ENSG00000171798:ENST00000368572:exon6:c.A1307G:p.E436G	NA	NA	10q26.3	NA	NA	NA	NA	rs3810964	0.4	0.4	0.353	0.416933	0.4354	0.5774	0.3847	0.118	0.6595	0.46	0.59	0.37	0.11	0.4694	0.59	0.71	T	0.0	B	0.0	B	0.918	N	1.000	P	-1.39	N	1.59	T	-0.936	T	0.000	T	0.02	0.452	6.455	-5.95	-1.198	-0.407	2.448	0.452036	NA	0.93	0.457868	0.158864	NA	0.37	NA	7.9706654
855	6	150210681	150210681	G	A	exonic	RAET1E	NA	nonsynonymous SNV	RAET1E:NM_001243325:exon3:c.C317T:p.T106I,RAET1E:NM_001243327:exon3:c.C425T:p.T142I,RAET1E:NM_139165:exon3:c.C425T:p.T142I,RAET1E:NM_001243328:exon4:c.C425T:p.T142I	exonic	ENSG00000164520	NA	nonsynonymous SNV	ENSG00000164520:ENST00000357183:exon3:c.C425T:p.T142I,ENSG00000164520:ENST00000367363:exon3:c.C317T:p.T106I,ENSG00000164520:ENST00000392270:exon3:c.C319T:p.P107S,ENSG00000164520:ENST00000529948:exon3:c.C425T:p.T142I,ENSG00000164520:ENST00000532335:exon4:c.C425T:p.T142I	NA	NA	6q25.1	NA	Name=STAT3,Pol2(phosphoS2),Pol2,c-Jun,JunD,p300_(N-15),GTF2F1_(RAP-74),CEBPB,TBP	Name=19	NA	rs9371533	0.65	0.65	0.643	0.685903	0.4324	0.8968	0.5447	0.8442	0.6155	0.42	0.88	0.55	0.81	0.5184	0.88	0.81	T	0.0	B	0.0	B	0.534	N	1.000	P	-1.955	N	5.85	T	-0.977	T	0.001	T	0.025	-0.073	3.644	-1.75	-0.637	0.847	4.443	-0.072921	NA	0.52	0.412093	0.789378	NA	0.746	NA	7.9704404
855	17	77081788	77081788	G	A	exonic	ENGASE	NA	nonsynonymous SNV	ENGASE:NM_001042573:exon13:c.G1787A:p.S596N	exonic	ENSG00000167280	NA	nonsynonymous SNV	ENSG00000167280:ENST00000579016:exon13:c.G1787A:p.S596N	NA	NA	17q25.3	NA	NA	NA	NA	rs4789879	0.09	0.09	0.067	0.0948482	0.1123	0.0387	0.1571	0.0552	0.1442	0.12	0.04	0.14	0.05	0.1257	0.14	1	T	0.001	B	0.003	B	0.070	N	0.968	P	0.255	N	.	.	-1.047	T	0.000	T	0.008	-1.243	0.054	-3.02	-0.173	0.152	2.390	-1.242869	NA	0.7	0.125957	0.060197	NA	0.138	NA	7.9693764
855	3	141162185	141162185	T	G	exonic	ZBTB38	NA	nonsynonymous SNV	ZBTB38:NM_001080412:exon8:c.T955G:p.S319A	exonic	ENSG00000177311	NA	nonsynonymous SNV	ENSG00000177311:ENST00000321464:exon2:c.T958G:p.S320A,ENSG00000177311:ENST00000441582:exon2:c.T955G:p.S319A,ENSG00000177311:ENST00000509883:exon3:c.T955G:p.S319A,ENSG00000177311:ENST00000514251:exon4:c.T955G:p.S319A	NA	NA	3q23	NA	NA	NA	NA	rs16851435	0.18	0.18	0.153	0.169129	0.1113	0.3095	0.2219	0.087	0.1575	0.1	0.34	0.2	0.09	0.1489	0.34	.	.	0.018	B	0.015	B	0.312	N	1.000	P	0.55	N	3.39	T	-0.904	T	0.000	T	0.042	-0.042	3.8	-2.59	-0.388	-0.438	11.451	-0.04187	NA	0.82	0.104841	0.097689	NA	0.08	NA	7.9682924
855	1	240492734	240492734	G	A	exonic	FMN2	NA	nonsynonymous SNV	FMN2:NM_020066:exon10:c.G4403A:p.R1468H	exonic	ENSG00000155816	NA	nonsynonymous SNV	ENSG00000155816:ENST00000545751:exon3:c.G191A:p.R64H,ENSG00000155816:ENST00000319653:exon10:c.G4403A:p.R1468H	Score=535;Name=lod=199	NA	1q43	NA	NA	NA	NA	rs3795677	0.32	0.32	0.326	0.320887	0.2883	0.3185	0.3588	0.3381	0.3067	0.3	0.34	0.35	0.32	0.3027	0.38	0.9	T	0.472	P	0.258	B	0.027	N	0.000	P	0.77	N	2.21	T	-0.994	T	0.000	T	0.043	0.738	7.918	1.72	0.059	-0.225	11.889	0.737991	NA	0.06	0.274767	0.313209	NA	0.348	NA	7.9675664
855	17	72784932	72784932	G	A	exonic	TMEM104	NA	nonsynonymous SNV	TMEM104:NM_017728:exon4:c.G172A:p.V58M	exonic	ENSG00000109066	NA	nonsynonymous SNV	ENSG00000109066:ENST00000335464:exon4:c.G172A:p.V58M,ENSG00000109066:ENST00000417024:exon4:c.G211A:p.V71M,ENSG00000109066:ENST00000582330:exon4:c.G172A:p.V58M,ENSG00000109066:ENST00000582773:exon4:c.G172A:p.V58M	Score=435;Name=lod=78	NA	17q25.1	NA	NA	NA	NA	rs2016126	0.56	0.56	0.568	0.546326	0.6412	0.3968	0.5	0.6293	0.5235	0.63	0.42	0.57	0.62	0.5845	0.65	0.47	T	0.76	P	0.074	B	0.000	N	0.027	P	-0.56	N	4.33	T	-0.959	T	0.000	T	0.083	-1.139	0.111	-1.14	-0.099	2.575	9.669	-1.138711	NA	0.58	0.640233	0.648661	NA	0.551	NA	7.9674004
855	1	154919080	154919080	C	T	exonic	PBXIP1	NA	nonsynonymous SNV	PBXIP1:NM_020524:exon10:c.G1070A:p.G357D	exonic	ENSG00000163346	NA	nonsynonymous SNV	ENSG00000163346:ENST00000539880:exon7:c.G551A:p.G184D,ENSG00000163346:ENST00000542459:exon7:c.G605A:p.G202D,ENSG00000163346:ENST00000368465:exon9:c.G983A:p.G328D,ENSG00000163346:ENST00000368463:exon10:c.G1070A:p.G357D	NA	NA	1q21.3	NA	NA	NA	NA	rs2061690	0.52	0.52	0.474	0.515974	0.4334	0.8958	0.6297	0.1498	0.6237	0.44	0.89	0.58	0.17	0.4977	0.89	0.61	T	0.087	B	0.063	B	0.002	N	1.000	P	1.1	L	2.69	T	-0.965	T	0.009	T	0.084	-0.033	3.845	3.57	1.107	0.459	6.933	-0.032974	NA	0.24	0.434884	0.202678	NA	0.449	NA	7.9673494
855	6	31106459	31106459	C	A	exonic	PSORS1C1	NA	nonsynonymous SNV	PSORS1C1:NM_014068:exon5:c.C70A:p.P24T	exonic	ENSG00000204540	NA	nonsynonymous SNV	ENSG00000204540:ENST00000259881:exon5:c.C70A:p.P24T	NA	NA	6p21.33	NA	NA	NA	NA	rs1265097	0.12	0.12	0.101	0.112021	0.1312	0.0357	0.1974	0.1293	0.0869	0.13	0.04	0.22	0.12	0.1243	0.22	0	D	0.22	B	0.076	B	.	.	1.000	P	0	N	2.35	T	-0.948	T	0.007	T	0.03	1.441	10.76	-0.431	-0.232	-0.724	3.389	1.440615	1.440615	0	0.112403	0.119788	NA	0.094	NA	7.9654304
856	4	113352397	113352397	G	A	exonic	ALPK1	NA	nonsynonymous SNV	ALPK1:NM_001253884:exon10:c.G1460A:p.G487D,ALPK1:NM_001102406:exon11:c.G1694A:p.G565D,ALPK1:NM_025144:exon11:c.G1694A:p.G565D	exonic	ENSG00000073331	NA	nonsynonymous SNV	ENSG00000073331:ENST00000504176:exon10:c.G1460A:p.G487D,ENSG00000073331:ENST00000177648:exon11:c.G1694A:p.G565D,ENSG00000073331:ENST00000458497:exon11:c.G1694A:p.G565D	NA	NA	4q25	NA	NA	NA	NA	rs2074388	0.64	0.64	0.652	0.627396	0.6173	0.6369	0.5576	0.7239	0.547	0.63	0.66	0.55	0.7	0.622	0.7	0.29	T	0.996	D	0.801	P	0.424	N	1.000	P	1.995	M	4.38	T	-1.097	T	0.000	T	0.474	2.279	13.58	1.76	0.195	0.724	7.727	2.279331	2.279331	0.09	0.630233	0.699955	NA	0.609	NA	7.9638004
856	19	49116438	49116438	A	G	exonic	FAM83E	NA	synonymous SNV	FAM83E:NM_017708:exon1:c.T192C:p.V64V	exonic	ENSG00000105523	NA	synonymous SNV	ENSG00000105523:ENST00000263266:exon1:c.T192C:p.V64V	Score=325;Name=lod=28	NA	19q13.33	NA	Name=Pol2	Name=5	NA	rs376524	0.34	0.34	0.313	0.334265	0.2147	0.4702	0.4251	0.3298	0.2587	0.21	0.51	0.35	0.35	0.286	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.064839	NA	NA	0.203052	0.277804	ID=COSM1395073;OCCURENCE=1(large_intestine)	0.319	NA	7.9629146
856	1	11728894	11728894	G	A	exonic	FBXO6	NA	nonsynonymous SNV	FBXO6:NM_018438:exon2:c.G179A:p.R60Q	exonic	ENSG00000116663	NA	nonsynonymous SNV	ENSG00000116663:ENST00000376753:exon2:c.G179A:p.R60Q	NA	NA	1p36.22	NA	NA	NA	NA	rs3125818	0.11	0.11	0.094	0.136382	0.1173	0.1498	0.1758	0.0726	0.2004	0.11	0.13	0.17	0.06	0.1398	0.17	0.48	T	0.357	B	0.106	B	0.000	N	0.999	P	1.425	L	0.79	T	-1.049	T	0.000	T	0.302	0.587	7.166	-3.48	-0.548	-0.088	5.820	0.586706	NA	0.42	0.113372	0.081934	NA	0.152	NA	7.9628614
856	1	145109661	145109661	G	A	exonic	SEC22B	NA	unknown	UNKNOWN	ncRNA_exonic	ENSG00000223380	NA	NA	NA	Score=669;Name=lod=697	NA	1q21.1	Score=833;Name=V$GR_Q6	Name=BDP1	Name=8	NA	rs2655551	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4969	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.209904	3.209904	NA	0.37386	0.396673	NA	0.449	NA	7.9625733
856	18	9887936	9887936	G	C	exonic	TXNDC2	NA	nonsynonymous SNV	TXNDC2:NM_001098529:exon2:c.G1460C:p.R487T,TXNDC2:NM_032243:exon2:c.G1259C:p.R420T	exonic	ENSG00000168454	NA	nonsynonymous SNV	ENSG00000168454:ENST00000306084:exon2:c.G1460C:p.R487T,ENSG00000168454:ENST00000357775:exon2:c.G1259C:p.R420T	NA	NA	18p11.22	NA	NA	NA	NA	rs17805544	0.06	0.06	0.047	0.0389377	0.1402	NA	0.0519	0.003	0.0143	0.15	NA	0.05	0.0041	0.0933	0.15	.	.	0.955	P	0.579	P	0.007	N	1.000	P	-0.5	N	4.01	T	-0.876	T	0.000	T	0.117	0.622	7.347	-1.97	-0.707	-0.041	9.745	0.622026	NA	NA	0.138256	0.026782	NA	NA	NA	7.9615774
856	22	31536133	31536133	A	C	exonic	PLA2G3	NA	nonsynonymous SNV	PLA2G3:NM_015715:exon1:c.T208G:p.S70A	exonic	ENSG00000100078	NA	nonsynonymous SNV	ENSG00000100078:ENST00000215885:exon1:c.T208G:p.S70A	Score=278;Name=lod=18	NA	22q12.2	NA	NA	NA	NA	rs2232176	0.82	0.82	0.806	0.832069	0.7873	0.9325	0.8646	0.7231	0.8988	0.78	0.92	0.85	0.73	0.8103	0.92	0.88	T	0.0	B	0.0	B	0.889	N	1.000	P	-1.355	N	2.75	T	-1.025	T	0.000	T	0.014	-0.605	1.301	3.58	0.342	0.989	7.119	-0.605006	NA	1	0.777209	0.703586	ID=COSM1484160,COSM444888;OCCURENCE=2(breast)	0.797	NA	7.9585244
856	1	12835868	12835868	T	C	exonic	PRAMEF12	NA	nonsynonymous SNV	PRAMEF12:NM_001080830:exon2:c.T470C:p.M157T	exonic	ENSG00000116726	NA	nonsynonymous SNV	ENSG00000116726:ENST00000357726:exon2:c.T470C:p.M157T	NA	NA	1p36.21	NA	NA	NA	NA	rs1812242	0.74	0.74	0.714	0.716454	0.7982	0.7183	0.8213	0.5696	0.7546	0.81	0.73	0.81	0.58	0.7739	0.81	0.56	T	0.0	B	0.0	B	0.017	N	1.000	P	-2.24	N	5.51	T	-0.995	T	0.000	T	0.008	-2.317	0.004	-2.39	-0.966	-1.543	5.42	-2.316973	NA	1	0.803488	0.606673	NA	0.674	NA	7.9577454
856	22	30700607	30700607	T	G	exonic	TBC1D10A	NA	synonymous SNV	TBC1D10A:NM_001204240:exon2:c.A243C:p.V81V,TBC1D10A:NM_031937:exon2:c.A222C:p.V74V	exonic	ENSG00000099992	NA	synonymous SNV	ENSG00000099992:ENST00000215790:exon2:c.A222C:p.V74V,ENSG00000099992:ENST00000403477:exon2:c.A243C:p.V81V,ENSG00000099992:ENST00000433426:exon2:c.A21C:p.V7V	Score=684;Name=lod=800	NA	22q12.2	Score=892;Name=V$NFKB_Q6	NA	Name=69	NA	rs4823089	0.18	0.18	0.181	0.158147	0.2535	0.1448	0.1571	0.1384	0.1012	0.24	0.12	0.17	0.15	0.1992	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.266362	1.266362	NA	0.256744	0.154789	NA	0.283	NA	7.9572226
857	9	112900199	112900199	T	C	exonic	AKAP2,PALM2-AKAP2	NA	nonsynonymous SNV	AKAP2:NM_001004065:exon2:c.T1949C:p.L650S,AKAP2:NM_001136562:exon2:c.T1682C:p.L561S,AKAP2:NM_001198656:exon2:c.T1949C:p.L650S,PALM2-AKAP2:NM_007203:exon8:c.T2375C:p.L792S,PALM2-AKAP2:NM_147150:exon8:c.T2375C:p.L792S	exonic	ENSG00000157654,ENSG00000241978	NA	nonsynonymous SNV	ENSG00000241978:ENST00000259318:exon2:c.T1682C:p.L561S,ENSG00000241978:ENST00000374525:exon2:c.T1949C:p.L650S,ENSG00000241978:ENST00000434623:exon2:c.T1949C:p.L650S,ENSG00000241978:ENST00000480388:exon2:c.T1829C:p.L610S,ENSG00000157654:ENST00000302798:exon8:c.T2375C:p.L792S,ENSG00000157654:ENST00000374530:exon8:c.T2375C:p.L792S,ENSG00000241978:ENST00000510514:exon8:c.T2375C:p.L792S,ENSG00000241978:ENST00000555236:exon8:c.T2375C:p.L792S	NA	NA	9q31.3	NA	NA	NA	NA	rs914358	0.43	0.43	0.433	0.455671	0.4493	0.3135	0.3588	0.5877	0.499	0.47	0.3	0.36	0.59	0.4674	0.59	0.71	T	0.034	B	0.021	B	0.117	N	1.000	P	0.55	N	2.26	T	-0.936	T	0.000	T	0.209	-0.853	0.542	4.96	1.529	0.734	5.127	-0.853209	NA	0.2	0.462326	0.574898	NA	0.594	NA	7.9543074
857	3	182751846	182751846	C	T	exonic	MCCC1	NA	synonymous SNV	MCCC1:NM_020166:exon14:c.G1614A:p.S538S	exonic	ENSG00000078070	NA	nonsynonymous SNV	ENSG00000078070:ENST00000497959:exon13:c.G1283A:p.R428H	Score=522;Name=lod=176	NA	3q27.1	NA	NA	Name=44	NA	rs34749281	0.01	0.01	0.008	0.00638978	0.0169	NA	0.0086	0.003	0.0051	0.02	NA	0.01	NA	0.0118	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.071188	2.071188	NA	0.017209	0.007717	NA	0.007	NA	7.954091
857	2	238283605	238283605	G	A	exonic	COL6A3	NA	synonymous SNV	COL6A3:NM_057166:exon5:c.C1308T:p.G436G,COL6A3:NM_057164:exon6:c.C1908T:p.G636G,COL6A3:NM_057165:exon7:c.C2511T:p.G837G,COL6A3:NM_057167:exon7:c.C2511T:p.G837G,COL6A3:NM_004369:exon8:c.C3129T:p.G1043G	exonic	ENSG00000163359	NA	synonymous SNV	ENSG00000163359:ENST00000472056:exon5:c.C1308T:p.G436G,ENSG00000163359:ENST00000392003:exon6:c.C1908T:p.G636G,ENSG00000163359:ENST00000409809:exon6:c.C2511T:p.G837G,ENSG00000163359:ENST00000346358:exon7:c.C2529T:p.G843G,ENSG00000163359:ENST00000347401:exon7:c.C2526T:p.G842G,ENSG00000163359:ENST00000353578:exon7:c.C2511T:p.G837G,ENSG00000163359:ENST00000392004:exon7:c.C2511T:p.G837G,ENSG00000163359:ENST00000295550:exon8:c.C3129T:p.G1043G	Score=336;Name=lod=31	NA	2q37.3	Score=1000;Name=V$STAT3_02	NA	NA	NA	rs12622093	0.21	0.21	0.18	0.215855	0.2465	0.2698	0.2536	0.1082	0.2474	0.23	0.27	0.25	0.09	0.2327	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.321216	NA	NA	0.233488	0.128915	ID=COSM1482931,COSM442555;OCCURENCE=1(breast)	0.138	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000080926.2;CLNDSDB=.;CLNDSDBID=.	7.9539786
857	6	17799575	17799575	A	G	exonic	KIF13A	NA	synonymous SNV	KIF13A:NM_001105566:exon22:c.T2712C:p.A904A,KIF13A:NM_001105567:exon22:c.T2712C:p.A904A,KIF13A:NM_001105568:exon22:c.T2712C:p.A904A,KIF13A:NM_022113:exon22:c.T2712C:p.A904A	exonic	ENSG00000137177	NA	synonymous SNV	ENSG00000137177:ENST00000259711:exon22:c.T2712C:p.A904A,ENSG00000137177:ENST00000378814:exon22:c.T2712C:p.A904A,ENSG00000137177:ENST00000378816:exon22:c.T2712C:p.A904A,ENSG00000137177:ENST00000378826:exon22:c.T2712C:p.A904A,ENSG00000137177:ENST00000378843:exon22:c.T2712C:p.A904A	Score=391;Name=lod=52	NA	6p22.3	NA	NA	NA	NA	rs3734235	0.18	0.18	0.173	0.207668	0.2396	0.1964	0.1556	0.0998	0.3691	0.25	0.16	0.17	0.1	0.2395	0.25	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.986	T	0.017	T	.	1.337	10.39	-4.84	-0.408	-0.345	2.882	1.336824	1.336824	NA	0.235966	0.12474	NA	0.232	NA	7.9516006
857	5	74017499	74017499	C	T	exonic	GFM2	NA	nonsynonymous SNV	GFM2:NM_170691:exon20:c.G2180A:p.R727Q,GFM2:NM_032380:exon21:c.G2321A:p.R774Q	exonic	ENSG00000164347	NA	nonsynonymous SNV	ENSG00000164347:ENST00000345239:exon20:c.G2180A:p.R727Q,ENSG00000164347:ENST00000296805:exon21:c.G2321A:p.R774Q,ENSG00000164347:ENST00000509430:exon22:c.G2321A:p.R774Q	NA	NA	5q13.3	NA	NA	NA	NA	rs1048167	0.12	0.12	0.126	0.123602	0.1382	0.0218	0.1095	0.2284	0.0818	0.11	0.03	0.13	0.25	0.12	0.25	0.13	T	0.03	B	0.065	B	0.022	N	1.000	P	0	N	0.58	T	-1.023	T	0.000	T	0.074	1.525	11.05	-3.33	-0.678	-0.165	13.197	1.525283	1.525283	0.53	0.123953	0.224921	NA	0.174	NA	7.9511804
857	17	39580660	39580660	T	C	exonic	KRT37	NA	nonsynonymous SNV	KRT37:NM_003770:exon1:c.A116G:p.N39S	exonic	ENSG00000108417	NA	nonsynonymous SNV	ENSG00000108417:ENST00000225550:exon1:c.A116G:p.N39S	NA	NA	17q21.2	NA	NA	NA	NA	rs9916724	0.37	0.37	0.339	0.391374	0.4592	0.4067	0.3415	0.1846	0.6207	0.45	0.4	0.4	0.21	0.4381	0.48	0.69	T	0.0	B	0.0	B	0.455	N	1.000	P	0.55	N	-1.47	T	-0.977	T	0.000	T	0.088	0.22	5.186	2.94	1.127	-0.252	6.415	0.219886	NA	0.38	0.484884	0.223105	NA	0.348	NA	7.9511494
857	7	89912301	89912301	G	A	exonic	C7orf63	NA	nonsynonymous SNV	C7orf63:NM_001039706:exon13:c.G1468A:p.V490M,C7orf63:NM_001160138:exon13:c.G1414A:p.V472M	exonic	ENSG00000105792	NA	nonsynonymous SNV	ENSG00000105792:ENST00000449577:exon2:c.G217A:p.V73M,ENSG00000105792:ENST00000457170:exon9:c.G1117A:p.V373M,ENSG00000105792:ENST00000316089:exon13:c.G1468A:p.V490M,ENSG00000105792:ENST00000389297:exon13:c.G1468A:p.V490M,ENSG00000105792:ENST00000497910:exon13:c.G1414A:p.V472M	Score=419;Name=lod=67	NA	7q21.13	NA	NA	NA	NA	rs1029365	0.87	0.87	0.86	0.884185	0.7883	0.995	0.8501	0.8812	0.8967	0.79	1	0.84	0.86	0.8295	1	1	T	0.01	B	0.012	B	0.000	N	1.000	P	-1.48	N	1.48	T	-0.951	T	0.000	T	0.148	-0.585	1.376	4.23	0.351	1.561	7.204	-0.584822	NA	1	0.765595	0.859556	NA	0.862	NA	7.9499384
857	17	74381555	74381555	G	A	exonic	SPHK1	NA	nonsynonymous SNV	SPHK1:NM_182965:exon2:c.G88A:p.A30T	exonic	ENSG00000176170	NA	nonsynonymous SNV	ENSG00000176170:ENST00000323374:exon2:c.G88A:p.A30T	NA	NA	17q25.1	NA	Name=CCNT2,AP-2alpha,TAL1_(SC-12984),GATA-1,HMGN3	Name=6	NA	rs2247856	0.28	0.28	0.23	0.253994	0.4473	0.1935	0.3934	0.0378	0.3108	0.46	0.17	0.37	0.04	0.5252	0.46	0.34	T	0.025	B	0.006	B	0.133	N	0.061	P	.	.	1.8	T	-0.905	T	0.000	T	0.064	2.674	14.9	1.8	0.499	0.087	6.481	2.673696	2.673696	0.13	0.411376	0.082162	ID=COSM1324836;OCCURENCE=1(ovary)	0.21	NA	7.9494574
857	2	120409616	120409616	G	T	exonic	PCDP1	NA	nonsynonymous SNV	PCDP1:NM_001271049:exon23:c.G2385T:p.M795I	exonic	ENSG00000163075	NA	nonsynonymous SNV	ENSG00000163075:ENST00000413369:exon23:c.G2385T:p.M795I,ENSG00000163075:ENST00000602047:exon24:c.G1527T:p.M509I	NA	NA	2q14.2	Score=866;Name=V$IK1_01	NA	NA	NA	rs11686014	0.16	0.16	0.152	0.151558	0.1282	0.126	0.1196	0.2239	0.1268	0.13	0.14	0.14	0.22	0.1314	0.22	0.36	T	0.004	B	0.002	B	0.837	N	1.000	P	0.49	N	1.66	T	-0.969	T	0.000	T	0.221	-0.615	1.264	1.95	0.615	0.226	3.753	-0.6149	NA	0.56	0.124419	0.218339	NA	0.167	NA	7.9493144
857	22	42970032	42970032	T	C	exonic	SERHL2	NA	nonsynonymous SNV	SERHL2:NM_014509:exon12:c.T916C:p.C306R	exonic	ENSG00000183569	NA	nonsynonymous SNV	ENSG00000183569:ENST00000407614:exon7:c.T376C:p.C126R,ENSG00000183569:ENST00000335879:exon10:c.T724C:p.C242R,ENSG00000183569:ENST00000327678:exon12:c.T916C:p.C306R	NA	NA	22q13.2	NA	NA	NA	NA	rs137055	0.36	0.36	0.373	0.372404	0.1004	0.7093	0.1801	0.5265	0.2331	0.1	0.67	0.18	0.55	0.1904	0.67	0.5	T	0.0	B	0.0	B	0.890	N	1.000	P	-1.28	N	2.86	T	-0.948	T	0.000	T	0.137	0.286	5.546	-0.864	-0.094	-1.099	1.160	0.285594	NA	0.44	0.094906	0.456423	ID=COSM149304;OCCURENCE=1(stomach)	0.297	NA	7.9476274
857	12	32134638	32134638	T	C	exonic	KIAA1551	NA	nonsynonymous SNV	KIAA1551:NM_018169:exon4:c.T749C:p.L250P	exonic	ENSG00000174718	NA	nonsynonymous SNV	ENSG00000174718:ENST00000381054:exon3:c.T749C:p.L250P,ENSG00000174718:ENST00000312561:exon4:c.T749C:p.L250P	NA	NA	12p11.21	NA	NA	NA	NA	rs2166807	0.84	0.84	0.846	0.840256	0.7893	0.8244	0.8184	0.9062	0.8354	0.8	0.85	0.81	0.91	0.8123	0.91	.	.	0.0	B	0.0	B	0.386	N	1.000	P	-1.1	N	4.06	T	-1.022	T	0.000	T	0.424	-0.89	0.46	4.69	1.412	0.959	8.221	-0.889689	NA	0.28	0.784419	0.881071	NA	0.79	NA	7.9473144
857	4	6594947	6594947	A	C	exonic	MAN2B2	NA	nonsynonymous SNV	MAN2B2:NM_015274:exon6:c.A728C:p.Q243P	exonic	ENSG00000013288	NA	nonsynonymous SNV	ENSG00000013288:ENST00000285599:exon6:c.A728C:p.Q243P,ENSG00000013288:ENST00000504248:exon6:c.A728C:p.Q243P	NA	NA	4p16.1	NA	NA	NA	NA	rs2301796	0.45	0.45	0.412	0.433906	0.4543	0.6141	0.4841	0.1762	0.5399	0.46	0.62	0.49	0.21	0.4649	0.62	0.31	T	0.0	B	0.0	B	0.198	N	1.000	P	-0.66	N	2.2	T	-0.969	T	0.000	T	0.373	0.48	6.607	-9.4	-2.218	0.375	3.218	0.480416	NA	0.34	0.466977	0.230595	ID=COSM448019;OCCURENCE=1(breast)	0.435	NA	7.9471564
857	14	23874523	23874523	C	T	exonic	MYH6	NA	synonymous SNV	MYH6:NM_002471:exon5:c.G411A:p.E137E	exonic	ENSG00000197616	NA	synonymous SNV	ENSG00000197616:ENST00000356287:exon4:c.G411A:p.E137E,ENSG00000197616:ENST00000405093:exon5:c.G411A:p.E137E	Score=616;Name=lod=424	NA	14q11.2	Score=829;Name=V$NGFIC_01	NA	NA	NA	rs2277474	0.16	0.16	0.154	0.154353	0.2485	0.0675	0.1513	0.1384	0.1708	0.24	0.05	0.2	0.13	0.2103	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.019597	NA	NA	0.260814	0.165229	NA	0.159	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000037497.2;CLNDSDB=.;CLNDSDBID=.	7.9470526
857	3	118867047	118867047	C	G	exonic	C3orf30	NA	nonsynonymous SNV	C3orf30:NM_152539:exon2:c.C1419G:p.D473E	exonic	ENSG00000163424	NA	nonsynonymous SNV	ENSG00000163424:ENST00000295622:exon2:c.C1419G:p.D473E,ENSG00000163424:ENST00000494105:exon2:c.C1419G:p.D473E	NA	NA	3q13.32	NA	NA	NA	NA	rs9289122	0.5	0.5	0.488	0.469649	0.4404	0.5119	0.4856	0.4818	0.4284	0.46	0.53	0.49	0.52	0.472	0.53	1	T	0.0	B	0.0	B	0.429	N	1.000	P	-0.895	N	2.77	T	-0.925	T	0.000	T	0.004	-1.284	0.041	-2.61	-0.718	-1.870	0.727	-1.283573	NA	1	0.47407	0.476169	NA	0.464	NA	7.9468634
857	13	48547467	48547467	A	T	exonic	SUCLA2	NA	nonsynonymous SNV	SUCLA2:NM_003850:exon5:c.T595A:p.S199T	exonic	ENSG00000136143	NA	nonsynonymous SNV	ENSG00000136143:ENST00000433022:exon2:c.T151A:p.S51T,ENSG00000136143:ENST00000434484:exon4:c.T385A:p.S129T,ENSG00000136143:ENST00000378654:exon5:c.T595A:p.S199T,ENSG00000136143:ENST00000534875:exon5:c.T421A:p.S141T,ENSG00000136143:ENST00000543413:exon6:c.T421A:p.S141T,ENSG00000136143:ENST00000544100:exon6:c.T193A:p.S65T	Score=668;Name=lod=693	NA	13q14.2	NA	NA	NA	NA	rs7320366	0.72	0.72	0.708	0.683506	0.8181	0.8006	0.6571	0.553	0.6196	0.8	0.75	0.72	0.55	0.7515	0.82	1	T	0.0	B	0.001	B	0.000	N	1.000	P	-1.355	N	-0.03	T	-0.928	T	0.000	T	0.221	0.25	5.351	4.56	0.427	4.741	10.528	0.250078	NA	0.37	0.818023	0.593736	NA	0.768	NA	7.9457104
857	22	32334021	32334021	T	A	exonic	C22orf24	NA	nonsynonymous SNV	C22orf24:NM_015372:exon2:c.A32T:p.H11L	exonic	ENSG00000128254	NA	nonsynonymous SNV	ENSG00000128254:ENST00000543051:exon1:c.A233T:p.H78L,ENSG00000128254:ENST00000248984:exon2:c.A32T:p.H11L	NA	NA	22q12.3	NA	NA	NA	NA	rs1984388	0.21	0.21	0.214	0.247604	0.1193	0.1984	0.1902	0.3865	0.2832	0.13	0.17	0.18	0.42	0.1658	0.42	0	D	0.0	B	0.0	B	0.327	N	1.000	P	0	N	1.04	T	-0.944	T	0.000	T	0.098	0.487	6.644	1.65	0.008	0.076	2.758	0.48738	NA	1	0.103093	0.354396	ID=COSM149280;OCCURENCE=1(stomach)	0.319	NA	7.9451404
858	6	33179689	33179689	C	T	exonic	RING1	NA	synonymous SNV	RING1:NM_002931:exon6:c.C1029T:p.D343D	exonic	ENSG00000204227	NA	synonymous SNV	ENSG00000204227:ENST00000374656:exon6:c.C1029T:p.D343D	Score=566;Name=lod=267	NA	6p21.32	NA	Name=Rad21,CTCF,CTCFL_(SC-98982),CTCF_(SC-5916)	Name=6	NA	rs2854028	0.16	0.16	0.16	0.17492	0.2147	0.1488	0.2219	0.0272	0.3272	0.21	0.19	0.18	0.03	0.2722	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.808627	NA	NA	0.236787	0.058917	NA	0.087	NA	7.9429796
858	1	214826196	214826196	G	A	exonic	CENPF	NA	nonsynonymous SNV	CENPF:NM_016343:exon16:c.G8186A:p.R2729Q	exonic	ENSG00000117724	NA	nonsynonymous SNV	ENSG00000117724:ENST00000366955:exon16:c.G8186A:p.R2729Q	NA	NA	1q41	NA	NA	NA	NA	rs335524	0.56	0.56	0.531	0.561102	0.4443	0.8849	0.5893	0.2874	0.6973	0.47	0.92	0.54	0.3	0.5174	0.92	0.65	T	0.003	B	0.001	B	.	.	1.000	P	-0.695	N	4.11	T	-1.022	T	0.000	T	0.02	-1.591	0.014	-6.44	-1.534	-0.136	14.173	-1.590593	NA	0.57	0.429186	0.317749	NA	0.362	NA	7.9424474
858	6	32609097	32609097	T	C	exonic	HLA-DQA1	NA	synonymous SNV	HLA-DQA1:NM_002122:exon2:c.T93C:p.V31V	exonic	ENSG00000196735	NA	synonymous SNV	ENSG00000196735:ENST00000343139:exon2:c.T93C:p.V31V,ENSG00000196735:ENST00000374949:exon2:c.T93C:p.V31V,ENSG00000196735:ENST00000395363:exon2:c.T93C:p.V31V,ENSG00000196735:ENST00000496318:exon2:c.T93C:p.V31V	NA	NA	6p21.32	Score=853;Name=V$MYCMAX_01	Name=Pol2-4H8	NA	NA	rs1129738	0.21	0.21	0.225	0.193091	0.2396	0.1339	0.2522	0.2171	0.1319	0.21	0.15	0.27	0.21	0.239	0.27	.	.	.	.	.	.	.	.	0.998	P	.	.	.	.	-0.989	T	0.019	T	.	-0.23	2.891	-0.455	-0.119	-0.091	1.161	-0.229734	NA	NA	0.246157	0.208579	NA	0.217	NA	7.9419096
858	11	114568942	114568942	T	C	exonic	NXPE2	NA	nonsynonymous SNV	NXPE2:NM_182495:exon3:c.T308C:p.V103A	exonic	ENSG00000204361	NA	nonsynonymous SNV	ENSG00000204361:ENST00000375475:exon3:c.T308C:p.V103A,ENSG00000204361:ENST00000389586:exon3:c.T308C:p.V103A	NA	NA	11q23.3	NA	NA	NA	NA	rs11215158	0.1	0.1	0.117	0.0926518	0.1441	0.0942	0.0951	0.0227	0.1309	0.14	0.1	0.1	0.03	0.1122	0.14	0.31	T	0.387	B	0.393	B	0.717	N	1.000	P	1.955	M	2.72	T	-0.993	T	0.001	T	0.087	1.993	12.62	0.501	-0.200	0.672	9.028	1.99341	1.99341	0.07	0.135135	0.039017	NA	0.051	NA	7.9418984
858	1	202888947	202888947	T	C	exonic	KLHL12	NA	synonymous SNV	KLHL12:NM_021633:exon3:c.A285G:p.T95T	exonic	ENSG00000117153	NA	synonymous SNV	ENSG00000117153:ENST00000367258:exon3:c.A399G:p.T133T,ENSG00000117153:ENST00000367261:exon3:c.A285G:p.T95T,ENSG00000117153:ENST00000435533:exon3:c.A399G:p.T133T	NA	NA	1q32.1	Score=990;Name=V$AREB6_04	Name=FOXA1_(C-20)	Name=2	NA	rs3182429	0.29	0.29	0.283	0.291733	0.2326	0.5208	0.3271	0.0681	0.3937	0.23	0.54	0.3	0.09	0.2662	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.116287	NA	NA	0.226744	0.115297	NA	0.254	NA	7.9411226
858	9	73461337	73461337	T	A	exonic	TRPM3	NA	synonymous SNV	TRPM3:NM_001007470:exon4:c.A174T:p.A58A,TRPM3:NM_001007471:exon4:c.A633T:p.A211A,TRPM3:NM_020952:exon4:c.A174T:p.A58A,TRPM3:NM_024971:exon4:c.A174T:p.A58A,TRPM3:NM_206944:exon4:c.A174T:p.A58A,TRPM3:NM_206945:exon4:c.A174T:p.A58A,TRPM3:NM_206946:exon4:c.A174T:p.A58A,TRPM3:NM_206947:exon4:c.A174T:p.A58A,TRPM3:NM_206948:exon4:c.A174T:p.A58A	exonic	ENSG00000083067	NA	synonymous SNV	ENSG00000083067:ENST00000358082:exon2:c.A174T:p.A58A,ENSG00000083067:ENST00000377097:exon2:c.A174T:p.A58A,ENSG00000083067:ENST00000396280:exon2:c.A174T:p.A58A,ENSG00000083067:ENST00000396285:exon2:c.A174T:p.A58A,ENSG00000083067:ENST00000396292:exon2:c.A174T:p.A58A,ENSG00000083067:ENST00000408909:exon2:c.A174T:p.A58A,ENSG00000083067:ENST00000357533:exon4:c.A639T:p.A213A,ENSG00000083067:ENST00000360823:exon4:c.A174T:p.A58A,ENSG00000083067:ENST00000361823:exon4:c.A174T:p.A58A,ENSG00000083067:ENST00000377101:exon4:c.A174T:p.A58A,ENSG00000083067:ENST00000377105:exon4:c.A174T:p.A58A,ENSG00000083067:ENST00000377106:exon4:c.A174T:p.A58A,ENSG00000083067:ENST00000377110:exon4:c.A633T:p.A211A,ENSG00000083067:ENST00000377111:exon4:c.A633T:p.A211A,ENSG00000083067:ENST00000396283:exon4:c.A174T:p.A58A,ENSG00000083067:ENST00000423814:exon4:c.A639T:p.A213A	Score=680;Name=lod=772	NA	9q21.12	Score=890;Name=V$TGIF_01	NA	NA	NA	rs7862440	0.49	0.49	0.439	0.520567	0.5835	0.2728	0.5591	0.5885	0.592	0.58	0.24	0.59	0.57	0.5531	0.59	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.938	T	0.000	T	.	1.424	10.7	2.61	0.020	0.268	2.883	1.423613	1.423613	NA	0.589419	0.56128	NA	0.565	NA	7.9406476
858	8	145603114	145603114	A	C	exonic	ADCK5	NA	nonsynonymous SNV	ADCK5:NM_174922:exon2:c.A51C:p.R17S	exonic	ENSG00000173137	NA	nonsynonymous SNV	ENSG00000173137:ENST00000308860:exon2:c.A51C:p.R17S,ENSG00000173137:ENST00000526833:exon2:c.A51C:p.R17S,ENSG00000173137:ENST00000529654:exon2:c.A51C:p.R17S,ENSG00000173137:ENST00000532190:exon2:c.A51C:p.R17S,ENSG00000173137:ENST00000533715:exon3:c.A149C:p.E50A	NA	NA	8q24.3	NA	NA	NA	NA	rs6599528	0.58	0.58	0.558	0.632388	0.4314	0.6577	0.5648	0.8101	0.6207	0.42	0.65	0.56	0.79	0.5255	0.79	0.84	T	0.0	B	0.001	B	0.858	N	1.000	P	-1.445	N	0.92	T	-0.944	T	0.000	T	0.108	-1.086	0.157	3.68	0.389	2.275	5.77	-1.08576	NA	0.48	0.436628	0.747048	ID=COSM150567;OCCURENCE=1(breast),1(stomach),1(large_intestine)	0.326	NA	7.9398054
858	11	123777497	123777497	G	A	exonic	OR8D4	NA	nonsynonymous SNV	OR8D4:NM_001005197:exon1:c.G359A:p.C120Y	exonic	ENSG00000181518	NA	nonsynonymous SNV	ENSG00000181518:ENST00000321355:exon1:c.G359A:p.C120Y	Score=441;Name=lod=83	NA	11q24.1	NA	NA	NA	NA	rs10750250	0.78	0.78	0.837	0.807708	0.8032	0.7688	0.8718	0.8986	0.684	0.73	0.73	0.83	0.89	0.8015	0.89	1	T	0.0	B	0.0	B	0.014	N	1.000	P	-3.11	N	8.13	T	-1.013	T	0.000	T	0.045	-2.065	0.006	4.66	0.441	1.148	9.841	-2.06496	NA	1	0.790649	0.875341	NA	0.514	NA	7.9379844
858	11	56409603	56409603	C	T	exonic	OR5AP2	NA	nonsynonymous SNV	OR5AP2:NM_001002925:exon1:c.G313A:p.A105T	exonic	ENSG00000172464	NA	nonsynonymous SNV	ENSG00000172464:ENST00000302981:exon1:c.G313A:p.A105T,ENSG00000172464:ENST00000544374:exon1:c.G316A:p.A106T	NA	NA	11q12.1	NA	NA	NA	NA	rs11606499	0.12	0.12	0.126	0.117812	0.1392	NA	0.1037	0.2587	0.0368	0.14	NA	0.09	0.26	0.1181	0.27	0.74	T	0.004	B	0.003	B	0.029	N	1.000	P	0.375	N	4.99	T	-0.958	T	0.000	T	0.074	-0.324	2.461	3.18	0.700	-0.013	9.464	-0.324119	NA	0.5	0.139548	0.267833	NA	0.138	NA	7.9364854
858	12	11214212	11214212	A	T	exonic	TAS2R46	NA	nonsynonymous SNV	TAS2R46:NM_176887:exon1:c.T682A:p.L228M	exonic	ENSG00000226761	NA	nonsynonymous SNV	ENSG00000226761:ENST00000533467:exon1:c.T682A:p.L228M	NA	NA	12p13.2	NA	NA	NA	NA	rs2708380	0.34	0.34	0.361	0.335863	0.4841	0.1925	0.4625	0.3404	0.2352	0.44	0.21	0.37	0.32	0.4256	0.49	0.23	T	0.883	P	0.521	P	.	.	1.000	P	1.53	L	5.29	T	-1.005	T	0.000	T	0.073	1.253	10.08	-3.08	-0.745	-0.066	4.127	1.25266	1.25266	0.19	0.488253	0.366546	NA	0.399	NA	7.9353804
858	2	107423395	107423395	T	G	exonic	ST6GAL2	NA	synonymous SNV	ST6GAL2:NM_001142351:exon6:c.A1329C:p.I443I,ST6GAL2:NM_032528:exon6:c.A1329C:p.I443I	exonic	ENSG00000144057	NA	synonymous SNV	ENSG00000144057:ENST00000361686:exon6:c.A1329C:p.I443I,ENSG00000144057:ENST00000409382:exon6:c.A1329C:p.I443I	Score=491;Name=lod=132	NA	2q12.2	NA	NA	NA	NA	rs1470590	0.43	0.43	0.431	0.409145	0.6113	0.1726	0.4654	0.4546	0.3436	0.61	0.16	0.48	0.42	0.5316	0.61	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.933	T	0.000	T	.	1.31	10.29	2.8	0.062	1.535	4.434	1.310325	1.310325	NA	0.588605	0.479573	NA	0.457	NA	7.9351616
859	12	56822378	56822378	T	A	exonic	TIMELESS	NA	nonsynonymous SNV	TIMELESS:NM_003920:exon12:c.A1363T:p.I455L	exonic	ENSG00000111602	NA	nonsynonymous SNV	ENSG00000111602:ENST00000229201:exon12:c.A1360T:p.I454L,ENSG00000111602:ENST00000553532:exon12:c.A1363T:p.I455L	Score=599;Name=lod=361	NA	12q13.3	NA	NA	NA	NA	rs774027	0.49	0.49	0.421	0.506589	0.4513	0.746	0.683	0.2534	0.5337	0.45	0.7	0.61	0.23	0.4941	0.7	0.3	T	0.0	B	0.002	B	0.199	N	0.000	P	0	N	3.35	T	-1.060	T	0.000	T	0.066	-0.165	3.196	-2.3	-0.517	0.322	2.383	-0.164811	NA	0.38	0.454302	0.269632	NA	0.507	NA	7.9336314
859	8	145729727	145729727	C	A	exonic	GPT	NA	nonsynonymous SNV	GPT:NM_005309:exon1:c.C40A:p.H14N	exonic	ENSG00000167701	NA	nonsynonymous SNV	ENSG00000167701:ENST00000394955:exon1:c.C40A:p.H14N,ENSG00000167701:ENST00000528431:exon2:c.C40A:p.H14N	NA	NA	8q24.3	NA	NA	NA	NA	rs1063739	0.42	0.42	0.373	0.432708	0.4602	0.5377	0.5086	0.1861	0.5757	0.46	0.48	0.54	0.18	0.4747	0.54	0.86	T	0.0	B	0.0	B	0.001	N	1.000	P	-0.345	N	-0.72	T	-0.938	T	0.000	T	0.053	-1.686	0.012	3.88	0.782	0.391	5.533	-1.685669	NA	0.24	0.465341	0.231608	NA	0.29	CLINSIG=non-pathogenic;CLNDBN=GLUTAMIC_PYRUVATE_TRANSAMINASE_POLYMORPHISM;CLNREVSTAT=single;CLNACC=RCV000017468.1;CLNDSDB=.;CLNDSDBID=.	7.9330924
859	3	194061907	194061907	G	A	exonic	CPN2	NA	stopgain	CPN2:NM_001080513:exon2:c.C1525T:p.Q509X	exonic	ENSG00000178772	NA	stopgain	ENSG00000178772:ENST00000323830:exon2:c.C1525T:p.Q509X,ENSG00000178772:ENST00000429275:exon2:c.C1525T:p.Q509X	NA	NA	3q29	NA	NA	NA	NA	rs4974539	0.26	0.26	0.295	0.280152	0.3509	0.38	0.2378	0.23	0.2025	0.3	0.28	0.21	0.22	0.3331	0.38	0.55	T	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	1.947	12.47	-4.38	-0.644	0.263	13.673	1.946724	1.946724	0.06	0.38314	0.269178	NA	NA	NA	7.93286
859	3	16640075	16640075	T	C	exonic	DAZL	NA	nonsynonymous SNV	DAZL:NM_001190811:exon2:c.A94G:p.T32A,DAZL:NM_001351:exon2:c.A34G:p.T12A	exonic	ENSG00000092345	NA	nonsynonymous SNV	ENSG00000092345:ENST00000250863:exon2:c.A94G:p.T32A,ENSG00000092345:ENST00000399444:exon2:c.A34G:p.T12A,ENSG00000092345:ENST00000454457:exon3:c.A148G:p.T50A	NA	NA	3p24.3	NA	NA	NA	NA	rs11710967	0.09	0.09	0.076	0.0680911	0.1551	0.0486	0.1052	0.0091	0.0521	0.15	0.06	0.11	0.01	0.1084	0.15	0.26	T	0.028	B	0.024	B	0.069	N	1.000	P	1.25	L	1.96	T	-1.061	T	0.000	T	0.098	1.91	12.34	-2.98	-0.413	-0.127	6.803	1.910116	1.910116	0.1	0.137009	0.025933	NA	0.123	NA	7.9328244
859	7	55249063	55249063	G	A	exonic	EGFR	NA	synonymous SNV	EGFR:NM_005228:exon20:c.G2361A:p.Q787Q	exonic	ENSG00000146648	NA	synonymous SNV	ENSG00000146648:ENST00000455089:exon19:c.G2226A:p.Q742Q,ENSG00000146648:ENST00000275493:exon20:c.G2361A:p.Q787Q,ENSG00000146648:ENST00000454757:exon20:c.G2202A:p.Q734Q	Score=452;Name=lod=92	NA	7p11.2	NA	Name=CTCF,c-Myc	Name=11	NA	rs1050171	0.42	0.42	0.407	0.432708	0.6074	0.1825	0.5519	0.4175	0.4468	0.61	0.13	0.51	0.4	0.5228	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.367041	3.367041	0	0.603837	0.422606	ID=COSM1451600;OCCURENCE=1(large_intestine)	0.457	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000038427.1;CLNDSDB=.;CLNDSDBID=.	7.9326296
859	5	74069863	74069863	A	G	exonic	NSA2	NA	synonymous SNV	NSA2:NM_014886:exon5:c.A693G:p.T231T	exonic	ENSG00000164346	NA	synonymous SNV	ENSG00000164346:ENST00000296802:exon5:c.A693G:p.T231T	Score=609;Name=lod=397	NA	5q13.3	Score=856;Name=V$CREB_Q2	Name=BCL3	NA	NA	rs6874609	0.36	0.36	0.364	0.380791	0.2416	0.2063	0.3357	0.7481	0.2393	0.22	0.19	0.37	0.77	0.2716	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.286672	NA	NA	0.222326	0.672038	NA	0.471	NA	7.9311406
859	11	61539020	61539020	C	G	exonic	MYRF	NA	synonymous SNV	MYRF:NM_001127392:exon6:c.C789G:p.P263P,MYRF:NM_013279:exon6:c.C762G:p.P254P	exonic	ENSG00000124920	NA	synonymous SNV	ENSG00000124920:ENST00000265460:exon6:c.C762G:p.P254P,ENSG00000124920:ENST00000278836:exon6:c.C789G:p.P263P	Score=593;Name=lod=342	NA	11q12.2	Score=834;Name=V$SREBP1_02	Name=CTCF	NA	NA	rs149803	0.12	0.12	0.11	0.091254	0.2793	0.002	0.1657	0.0189	0.0348	0.25	0.0017	0.18	0.03	0.1849	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.193048	NA	NA	0.271807	0.056767	NA	0.152	NA	7.9306596
859	7	44099664	44099664	T	C	exonic	DBNL	NA	synonymous SNV	DBNL:NM_001014436:exon12:c.T1065C:p.A355A,DBNL:NM_001122956:exon12:c.T1092C:p.A364A,DBNL:NM_014063:exon12:c.T1068C:p.A356A	exonic	ENSG00000136279	NA	synonymous SNV	ENSG00000136279:ENST00000440166:exon10:c.T756C:p.A252A,ENSG00000136279:ENST00000490734:exon10:c.T783C:p.A261A,ENSG00000136279:ENST00000452943:exon11:c.T993C:p.A331A,ENSG00000136279:ENST00000456905:exon11:c.T921C:p.A307A,ENSG00000136279:ENST00000448521:exon12:c.T1065C:p.A355A,ENSG00000136279:ENST00000468694:exon12:c.T1092C:p.A364A,ENSG00000136279:ENST00000494774:exon12:c.T1068C:p.A356A	NA	NA	7p13	NA	NA	NA	NA	rs11552797	0.26	0.26	0.228	0.266973	0.2406	0.1141	0.2882	0.4387	0.2045	0.25	0.12	0.29	0.39	0.2638	0.42	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-1.105	T	0.000	T	.	1.573	11.21	-7.58	-1.961	-0.487	18.070	1.572572	1.572572	NA	0.231628	0.419655	ID=COSM150276;OCCURENCE=1(stomach)	0.239	NA	7.9306386
859	11	113268059	113268059	G	A	exonic	ANKK1	NA	nonsynonymous SNV	ANKK1:NM_178510:exon6:c.G952A:p.G318R	exonic	ENSG00000170209	NA	nonsynonymous SNV	ENSG00000170209:ENST00000303941:exon6:c.G952A:p.G318R	NA	NA	11q23.2	Score=781;Name=V$TAXCREB_01	NA	NA	NA	rs11604671	0.26	0.26	0.241	0.226238	0.501	0.0625	0.3026	0.0393	0.3108	0.49	0.06	0.36	0.06	0.3992	0.5	0.57	T	0.0	B	0.0	B	0.084	N	1.000	P	0	N	-0.79	T	-0.994	T	0.000	T	0.026	1.852	12.15	0.519	-0.309	-1.959	2.527	1.85156	1.85156	0.63	0.502827	0.120206	NA	0.159	NA	7.9303064
859	14	45644589	45644589	G	T	exonic	FANCM	NA	nonsynonymous SNV	FANCM:NM_020937:exon14:c.G2632T:p.V878L	exonic	ENSG00000187790	NA	nonsynonymous SNV	ENSG00000187790:ENST00000556250:exon7:c.G1180T:p.V394L,ENSG00000187790:ENST00000542564:exon13:c.G2554T:p.V852L,ENSG00000187790:ENST00000267430:exon14:c.G2632T:p.V878L	NA	NA	14q21.2	NA	NA	NA	NA	rs1367580	0.21	0.21	0.218	0.232228	0.1282	0.128	0.1729	0.4478	0.1973	0.14	0.13	0.16	0.46	0.1568	0.46	1	T	0.0	B	0.0	B	0.815	N	1.000	P	-1.7	N	2.94	T	-0.903	T	0.000	T	0.021	-2.589	0	4.08	0.383	0.856	6.780	-2.58927	NA	1	0.118937	0.332726	NA	0.232	NA	7.9293964
859	10	105810400	105810400	T	C	exonic	COL17A1	NA	nonsynonymous SNV	COL17A1:NM_000494:exon27:c.A2107G:p.M703V	exonic	ENSG00000065618	NA	nonsynonymous SNV	ENSG00000065618:ENST00000353479:exon27:c.A2107G:p.M703V,ENSG00000065618:ENST00000369733:exon27:c.A2107G:p.M703V	NA	NA	10q25.1	Score=845;Name=V$GRE_C	NA	NA	NA	rs805722	0.72	0.72	0.675	0.69369	0.8052	0.7659	0.7954	0.4728	0.7311	0.8	0.79	0.81	0.47	0.7803	0.82	0.3	T	0.0	B	0.001	B	0.071	N	0.091	P	0.08	N	-3.22	D	-0.959	T	0.000	T	0.18	-1.681	0.012	-4.21	-0.640	-0.222	7.481	-1.68079	NA	0.35	0.818488	0.524966	ID=COSM1178415;OCCURENCE=1(prostate)	0.717	NA	7.9293454
859	19	51728477	51728477	C	T	exonic	CD33	NA	nonsynonymous SNV	CD33:NM_001177608:exon2:c.C41T:p.A14V,CD33:NM_001772:exon2:c.C41T:p.A14V	exonic	ENSG00000105383	NA	nonsynonymous SNV	ENSG00000105383:ENST00000262262:exon2:c.C41T:p.A14V,ENSG00000105383:ENST00000391796:exon2:c.C41T:p.A14V	NA	NA	19q13.41	NA	Name=TBP,Pol2	NA	NA	rs12459419	0.24	0.24	0.189	0.210663	0.3101	0.1855	0.4841	0.0514	0.1554	0.31	0.18	0.42	0.07	0.2939	0.42	0.12	T	0.766	P	0.283	B	.	.	1.000	P	0.975	L	2.45	T	-0.889	T	0.000	T	0.032	1.889	12.28	0.919	0.184	0.120	9.354	1.889446	1.889446	0.11	0.300581	0.093282	NA	0.167	NA	7.9287524
859	14	20925154	20925154	T	G	exonic	APEX1	NA	nonsynonymous SNV	APEX1:NM_001244249:exon5:c.T444G:p.D148E,APEX1:NM_001641:exon5:c.T444G:p.D148E,APEX1:NM_080648:exon5:c.T444G:p.D148E,APEX1:NM_080649:exon5:c.T444G:p.D148E	exonic	ENSG00000100823	NA	nonsynonymous SNV	ENSG00000100823:ENST00000216714:exon5:c.T444G:p.D148E,ENSG00000100823:ENST00000398030:exon5:c.T444G:p.D148E,ENSG00000100823:ENST00000553681:exon5:c.T444G:p.D148E,ENSG00000100823:ENST00000555414:exon5:c.T444G:p.D148E,ENSG00000100823:ENST00000556054:exon5:c.T444G:p.D148E,ENSG00000100823:ENST00000557150:exon5:c.T393G:p.D131E,ENSG00000100823:ENST00000557592:exon5:c.T393G:p.D131E	Score=572;Name=lod=281	NA	14q11.2	NA	NA	NA	NA	rs1130409	0.44	0.44	0.405	0.375599	0.508	0.4058	0.4352	0.3215	0.2393	0.52	0.41	0.44	0.36	0.428	0.52	1	T	0.0	B	0.0	B	0.000	N	0.000	P	-0.02	N	-1.31	T	-1.027	T	0.000	T	0.131	-1.58	0.014	-2.6	-0.729	0.107	6.442	-1.579649	NA	1	0.471395	0.365638	NA	0.37	NA	7.9259384
859	15	66629403	66629403	C	A	exonic	TIPIN	NA	nonsynonymous SNV	TIPIN:NM_017858:exon8:c.G799T:p.A267S	exonic	ENSG00000075131	NA	nonsynonymous SNV	ENSG00000075131:ENST00000367709:exon7:c.G496T:p.A166S,ENSG00000075131:ENST00000261881:exon8:c.G799T:p.A267S,ENSG00000075131:ENST00000562124:exon8:c.G799T:p.A267S	NA	NA	15q22.31	NA	NA	NA	NA	rs3759786	0.09	0.09	0.091	0.0702875	0.1252	0.0645	0.1153	0.0091	0.0706	0.14	0.07	0.13	0.01	0.1276	0.16	0.49	T	0.099	B	0.027	B	0.153	N	1.000	P	1.65	L	2.52	T	-1.000	T	0.000	T	0.182	1.258	10.1	2.61	0.437	0.374	7.286	1.258058	1.258058	0.42	0.155501	0.030227	NA	0.159	NA	7.9250324
860	21	15918577	15918577	G	C	exonic	SAMSN1	NA	synonymous SNV	SAMSN1:NM_022136:exon1:c.C6G:p.L2L	exonic	ENSG00000155307	NA	synonymous SNV	ENSG00000155307:ENST00000400564:exon1:c.C6G:p.L2L,ENSG00000155307:ENST00000400566:exon1:c.C6G:p.L2L	Score=554;Name=lod=238	NA	21q11.2	NA	Name=Pol2(b),EBF,c-Jun,Sin3Ak-20,GATA-2,Pol2-4H8,c-Fos,NFKB,HEY1,eGFP-GATA2,p300_(N-15),TBP,GATA2_(CG2-96),TAF1,GATA-1,POU2F2,Pol2,BCLAF1_(M33-P5B11),TAF7_(SQ-8),IRF4_(M-17),eGFP-JunD,GATA3_(SC-268),ELF1_(SC-631),Oct-2,p300,EBF1_(C-8),GTF2F1_(RAP-74)	Name=43	NA	rs7281104	0.26	0.26	0.276	0.303514	0.2475	0.2946	0.1931	0.3722	0.3558	0.23	0.29	0.19	0.35	0.2586	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.177648	NA	NA	0.23606	0.362787	NA	0.254	NA	7.9245066
860	6	25726621	25726621	C	T	exonic	HIST1H2AA	NA	synonymous SNV	HIST1H2AA:NM_170745:exon1:c.G135A:p.G45G	exonic	ENSG00000164508	NA	synonymous SNV	ENSG00000164508:ENST00000297012:exon1:c.G135A:p.G45G	Score=289;Name=lod=20	NA	6p22.2	Score=708;Name=V$HOX13_01	Name=Pol2-4H8,CHD2_(N-1250)	NA	NA	rs9467583	0.21	0.21	0.211	0.224441	0.2505	0.1062	0.196	0.3222	0.2076	0.24	0.09	0.2	0.31	0.2307	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.433352	NA	NA	0.261628	0.305493	ID=COSM1685422;OCCURENCE=1(skin)	0.29	NA	7.9238386
860	2	242610773	242610773	T	A	exonic	ATG4B	NA	nonsynonymous SNV	ATG4B:NM_013325:exon12:c.T1061A:p.L354Q,ATG4B:NM_178326:exon12:c.T1061A:p.L354Q	exonic	ENSG00000168397	NA	nonsynonymous SNV	ENSG00000168397:ENST00000428861:exon5:c.T572A:p.L191Q,ENSG00000168397:ENST00000402096:exon12:c.T839A:p.L280Q,ENSG00000168397:ENST00000404914:exon12:c.T1061A:p.L354Q,ENSG00000168397:ENST00000405546:exon12:c.T1061A:p.L354Q,ENSG00000168397:ENST00000396411:exon13:c.T839A:p.L280Q,ENSG00000168397:ENST00000474739:exon13:c.T1019A:p.L340Q	Score=561;Name=lod=255	NA	2q37.3	NA	NA	NA	NA	rs7601000	0.86	0.86	0.857	0.879393	0.8082	0.8651	0.8674	0.9584	0.8691	0.8	0.85	0.85	0.97	0.8153	0.97	0.64	T	0.001	B	0.0	B	0.000	N	0.936	P	-1.15	N	1.06	T	-1.002	T	0.000	T	0.313	0.3	5.627	2.7	0.289	1.370	5.721	0.300353	NA	0.59	0.786812	0.928904	ID=COSM442644;OCCURENCE=1(breast)	0.761	NA	7.9230214
860	1	21894735	21894735	T	C	exonic	ALPL	NA	nonsynonymous SNV	ALPL:NM_001177520:exon5:c.T556C:p.Y186H,ALPL:NM_001127501:exon6:c.T622C:p.Y208H,ALPL:NM_000478:exon7:c.T787C:p.Y263H	exonic	ENSG00000162551	NA	nonsynonymous SNV	ENSG00000162551:ENST00000539907:exon5:c.T556C:p.Y186H,ENSG00000162551:ENST00000425315:exon6:c.T787C:p.Y263H,ENSG00000162551:ENST00000540617:exon6:c.T622C:p.Y208H,ENSG00000162551:ENST00000374832:exon7:c.T787C:p.Y263H,ENSG00000162551:ENST00000374840:exon7:c.T787C:p.Y263H	NA	NA	1p36.12	NA	NA	NA	NA	rs3200254	0.28	0.28	0.279	0.266973	0.1203	0.4534	0.268	0.2655	0.227	0.13	0.49	0.26	0.28	0.1791	0.49	0.6	T	0.0	B	0.004	B	0.120	N	0.999	P	0.175	N	-3.95	D	-0.974	T	0.000	T	0.08	-1.522	0.016	1.91	0.462	-0.042	0.770	-1.521911	NA	1	0.111163	0.251702	NA	0.181	NA	7.9227704
860	1	160793560	160793560	A	G	exonic	LY9	NA	nonsynonymous SNV	LY9:NM_001261457:exon7:c.A1534G:p.M512V,LY9:NM_001261456:exon8:c.A1762G:p.M588V,LY9:NM_002348:exon8:c.A1804G:p.M602V	exonic	ENSG00000122224	NA	nonsynonymous SNV	ENSG00000122224:ENST00000368035:exon5:c.A718G:p.M240V,ENSG00000122224:ENST00000368041:exon7:c.A1414G:p.M472V,ENSG00000122224:ENST00000263285:exon8:c.A1804G:p.M602V,ENSG00000122224:ENST00000341032:exon8:c.A1402G:p.M468V,ENSG00000122224:ENST00000368037:exon8:c.A1669G:p.M557V,ENSG00000122224:ENST00000368040:exon8:c.A718G:p.M240V	NA	NA	1q23.3	NA	Name=Pol2	NA	NA	rs509749	0.63	0.63	0.628	0.660144	0.4503	0.7034	0.6686	0.7912	0.6483	0.45	0.71	0.64	0.79	0.5388	0.79	1	T	0.0	B	0.0	B	0.030	N	1.000	P	-0.625	N	2.69	T	-1.011	T	0.009	T	0.013	-2.601	0	2.28	0.061	-0.210	8.371	-2.60085	NA	0.86	0.421512	0.735588	NA	0.688	NA	7.9227214
860	4	7436486	7436486	C	A	exonic	PSAPL1	NA	nonsynonymous SNV	PSAPL1:NM_001085382:exon1:c.G121T:p.A41S	exonic	ENSG00000178597	NA	nonsynonymous SNV	ENSG00000178597:ENST00000319098:exon1:c.G121T:p.A41S	NA	NA	4p16.1	Score=961;Name=V$MYOD_Q6	NA	NA	NA	rs11548325	0.18	0.18	0.153	0.20008	0.1252	0.2946	0.2795	0.1543	0.1851	0.13	0.26	0.24	0.13	0.1776	0.26	0.74	T	0.44	B	0.14	B	.	.	1.000	P	0.895	L	0.55	T	-1.037	T	0.000	T	0.078	-2.189	0.005	1.63	0.487	0.676	4.684	-2.189265	NA	1	0.108951	0.143465	NA	0.239	NA	7.9215824
860	7	42262668	42262668	G	T	intronic	GLI3	NA	NA	NA	intronic	ENSG00000106571	NA	NA	NA	Score=278;Name=lod=18	NA	7p14.1	Score=847;Name=V$OCT1_Q6	Name=TCF12,NANOG_(SC-33759),TAF1,Pol2	Name=6	NA	rs2286291	0.05	0.05	0.043	0.0421326	0.0785	0.0387	0.0519	0.003	0.0542	0.08	0.04	0.06	0.01	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.644262	2.644262	0	NA	NA	NA	0.007	NA	7.9215
860	10	115370274	115370274	T	C	exonic	NRAP	NA	nonsynonymous SNV	NRAP:NM_006175:exon30:c.A3442G:p.I1148V,NRAP:NM_001261463:exon31:c.A3547G:p.I1183V,NRAP:NM_198060:exon31:c.A3547G:p.I1183V	exonic	ENSG00000197893	NA	nonsynonymous SNV	ENSG00000197893:ENST00000360478:exon30:c.A3442G:p.I1148V,ENSG00000197893:ENST00000369360:exon30:c.A3466G:p.I1156V,ENSG00000197893:ENST00000359988:exon31:c.A3547G:p.I1183V,ENSG00000197893:ENST00000369358:exon31:c.A3571G:p.I1191V	Score=391;Name=lod=52	NA	10q25.3	Score=829;Name=V$GR_Q6	NA	NA	NA	rs10749138	0.45	0.45	0.43	0.462859	0.4652	0.5992	0.4669	0.3321	0.4939	0.44	0.57	0.48	0.3	0.4627	0.57	1	T	0.0	B	0.001	B	0.012	N	0.000	P	0.44	N	2.66	T	-0.924	T	0.000	T	0.043	0.715	7.807	0.626	-0.123	0.173	9.731	0.714817	NA	1	0.48407	0.33409	ID=COSM1180648;OCCURENCE=1(upper_aerodigestive_tract)	0.377	NA	7.9213634
860	14	95080803	95080803	G	A	exonic	SERPINA3	NA	nonsynonymous SNV	SERPINA3:NM_001085:exon2:c.G25A:p.A9T	exonic	ENSG00000196136	NA	nonsynonymous SNV	ENSG00000196136:ENST00000393078:exon2:c.G25A:p.A9T,ENSG00000196136:ENST00000393080:exon2:c.G25A:p.A9T,ENSG00000196136:ENST00000467132:exon2:c.G25A:p.A9T,ENSG00000196136:ENST00000555820:exon2:c.G89A:p.G30D,ENSG00000196136:ENST00000556968:exon2:c.G25A:p.A9T,ENSG00000196136:ENST00000553947:exon5:c.G100A:p.A34T	NA	NA	14q32.13	NA	NA	NA	NA	rs4934	0.44	0.44	0.434	0.399361	0.4871	0.62	0.2781	0.2133	0.4192	0.49	0.65	0.3	0.2	0.448	0.65	0.37	T	0.297	B	0.135	B	0.442	N	1.000	P	0.55	N	-2.26	D	-0.971	T	0.000	T	0.284	2.444	14.13	-0.687	-0.020	-0.060	0.758	2.44351	2.44351	0.07	0.476977	0.256241	NA	0.486	CLINSIG=non-pathogenic;CLNDBN=ANTICHYMOTRYPSIN_SIGNAL_PEPTIDE_POLYMORPHISM;CLNREVSTAT=single;CLNACC=RCV000019667.1;CLNDSDB=.;CLNDSDBID=.	7.9212564
860	3	66444615	66444615	G	A	exonic	LRIG1	NA	synonymous SNV	LRIG1:NM_015541:exon12:c.C1317T:p.S439S	exonic	ENSG00000144749	NA	synonymous SNV	ENSG00000144749:ENST00000273261:exon12:c.C1317T:p.S439S,ENSG00000144749:ENST00000383703:exon13:c.C1389T:p.S463S	Score=577;Name=lod=296	NA	3p14.1	NA	Name=EBF1_(C-8),TCF12,NFKB,PAX5-N19,Pol2,Pol2-4H8,TAF1	Name=10	NA	rs6793110	0.26	0.26	0.247	0.28155	0.2445	0.0575	0.3617	0.5076	0.1881	0.25	0.05	0.33	0.48	0.2686	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.24397	1.24397	NA	0.232442	0.453473	ID=COSM149417;OCCURENCE=1(breast),1(stomach)	0.312	NA	7.9211246
860	10	123970530	123970530	T	C	exonic	TACC2	NA	nonsynonymous SNV	TACC2:NM_006997:exon3:c.T824C:p.V275A,TACC2:NM_206860:exon3:c.T824C:p.V275A,TACC2:NM_206861:exon6:c.T1028C:p.V343A,TACC2:NM_206862:exon9:c.T6590C:p.V2197A	exonic	ENSG00000138162	NA	nonsynonymous SNV	ENSG00000138162:ENST00000505639:exon1:c.T113C:p.V38A,ENSG00000138162:ENST00000260733:exon3:c.T824C:p.V275A,ENSG00000138162:ENST00000360561:exon3:c.T824C:p.V275A,ENSG00000138162:ENST00000368999:exon3:c.T824C:p.V275A,ENSG00000138162:ENST00000369004:exon3:c.T824C:p.V275A,ENSG00000138162:ENST00000514539:exon3:c.T875C:p.V292A,ENSG00000138162:ENST00000358010:exon5:c.T1028C:p.V343A,ENSG00000138162:ENST00000513429:exon6:c.T1028C:p.V343A,ENSG00000138162:ENST00000453444:exon7:c.T6602C:p.V2201A,ENSG00000138162:ENST00000334433:exon8:c.T6590C:p.V2197A,ENSG00000138162:ENST00000515273:exon8:c.T6602C:p.V2201A,ENSG00000138162:ENST00000515603:exon8:c.T6455C:p.V2152A,ENSG00000138162:ENST00000369005:exon9:c.T6590C:p.V2197A	NA	NA	10q26.13	NA	NA	NA	NA	rs2295873	0.32	0.32	0.327	0.35024	0.0875	0.3532	0.281	0.7065	0.1851	0.09	0.37	0.24	0.67	0.2029	0.67	0.83	T	0.0	B	0.001	B	0.055	N	1.000	P	-0.915	N	4.17	T	-0.988	T	0.000	T	0.198	-1.256	0.049	2.55	0.684	0.572	10.331	-1.256442	NA	0.53	0.122819	0.621763	NA	0.362	NA	7.9201144
860	2	86693826	86693826	T	C	exonic	KDM3A	NA	nonsynonymous SNV	KDM3A:NM_001146688:exon10:c.T1339C:p.S447P,KDM3A:NM_018433:exon10:c.T1339C:p.S447P	exonic	ENSG00000115548	NA	nonsynonymous SNV	ENSG00000115548:ENST00000542128:exon8:c.T1183C:p.S395P,ENSG00000115548:ENST00000312912:exon10:c.T1339C:p.S447P,ENSG00000115548:ENST00000409064:exon10:c.T1339C:p.S447P,ENSG00000115548:ENST00000441719:exon10:c.T1339C:p.S447P,ENSG00000115548:ENST00000409556:exon11:c.T1339C:p.S447P	NA	NA	2p11.2	NA	NA	NA	NA	rs34605051	0.09	0.09	0.089	0.0728834	0.1392	NA	0.0677	0.118	0.0225	0.14	NA	0.07	0.13	0.1139	0.16	0.08	T	0.001	B	0.0	B	0.001	N	1.000	P	0.805	L	0.2	T	-1.104	T	0.001	T	0.158	0.975	8.98	1.78	0.060	1.598	5.551	0.975208	NA	0.01	0.161977	0.127553	NA	0.145	NA	7.9182564
860	19	38229824	38229824	T	C	exonic	ZNF573	NA	nonsynonymous SNV	ZNF573:NM_001172692:exon4:c.A1303G:p.M435V,ZNF573:NM_001172690:exon5:c.A1567G:p.M523V,ZNF573:NM_001172691:exon5:c.A1561G:p.M521V,ZNF573:NM_001172689:exon6:c.A1303G:p.M435V,ZNF573:NM_152360:exon8:c.A1393G:p.M465V	exonic	ENSG00000189144	NA	nonsynonymous SNV	ENSG00000189144:ENST00000392138:exon3:c.A1306G:p.M436V,ENSG00000189144:ENST00000357309:exon4:c.A1303G:p.M435V,ENSG00000189144:ENST00000590414:exon4:c.A1567G:p.M523V,ENSG00000189144:ENST00000536220:exon6:c.A1303G:p.M435V,ENSG00000189144:ENST00000339503:exon8:c.A1393G:p.M465V	Score=352;Name=lod=36	NA	19q13.12	NA	NA	NA	NA	rs3095726	0.74	0.74	0.751	0.725839	0.833	0.3472	0.7579	0.9917	0.6237	0.84	0.35	0.78	0.99	0.766	0.99	0.02	D	0.0	B	0.0	B	.	.	0.000	P	-1.395	N	2.29	T	-1.024	T	0.000	T	0.022	0.593	7.201	-0.193	-0.269	1.410	5.635	0.593398	NA	0.12	0.816395	0.964821	ID=COSM1393266;OCCURENCE=1(large_intestine)	0.862	NA	7.9179384
860	2	25141538	25141538	A	G	exonic	ADCY3	NA	nonsynonymous SNV	ADCY3:NM_004036:exon1:c.T319C:p.S107P	exonic	ENSG00000138031	NA	nonsynonymous SNV	ENSG00000138031:ENST00000260600:exon1:c.T319C:p.S107P,ENSG00000138031:ENST00000435135:exon2:c.T319C:p.S107P,ENSG00000138031:ENST00000438445:exon2:c.T319C:p.S107P	NA	NA	2p23.3	NA	NA	NA	NA	rs11676272	0.54	0.54	0.56	0.566893	0.4642	0.4286	0.3876	0.913	0.4744	0.45	0.42	0.43	0.9	0.4798	0.9	0.29	T	0.0	B	0.0	B	0.066	N	1.000	P	-0.41	N	0.93	T	-0.994	T	0.000	T	0.483	-2.164	0.005	2.94	0.099	1.285	4.925	-2.164073	NA	0.3	0.471977	0.839991	NA	0.558	NA	7.9173564
860	1	157514097	157514097	A	G	exonic	FCRL5	NA	nonsynonymous SNV	FCRL5:NM_001195388:exon5:c.T799C:p.Y267H,FCRL5:NM_031281:exon5:c.T799C:p.Y267H	exonic	ENSG00000143297	NA	nonsynonymous SNV	ENSG00000143297:ENST00000368191:exon4:c.T544C:p.Y182H,ENSG00000143297:ENST00000356953:exon5:c.T799C:p.Y267H,ENSG00000143297:ENST00000361835:exon5:c.T799C:p.Y267H,ENSG00000143297:ENST00000368189:exon5:c.T799C:p.Y267H,ENSG00000143297:ENST00000368190:exon5:c.T799C:p.Y267H	NA	NA	1q23.1	NA	NA	NA	NA	rs6679793	0.74	0.74	0.727	0.707268	0.8221	0.9067	0.7334	0.4115	0.7648	0.84	0.9	0.71	0.43	0.7814	0.9	0.4	T	0.001	B	0.004	B	0.012	N	1.000	P	-1.1	N	2.82	T	-0.949	T	0.003	T	0.014	-0.11	3.462	-5.95	-0.960	-2.279	3.426	-0.10974	NA	0.66	0.812791	0.474126	NA	0.659	NA	7.9170424
861	16	20370816	20370816	C	T	exonic	PDILT	NA	nonsynonymous SNV	PDILT:NM_174924:exon12:c.G1580A:p.R527K	exonic	ENSG00000169340	NA	nonsynonymous SNV	ENSG00000169340:ENST00000302451:exon12:c.G1580A:p.R527K	NA	NA	16p12.3	NA	NA	NA	NA	rs9652589	0.36	0.36	0.348	0.35643	0.4732	0.1538	0.3473	0.4153	0.3722	0.48	0.15	0.35	0.4	0.4438	0.5	1	T	0.0	B	0.0	B	0.518	N	1.000	P	-0.805	N	4.11	T	-0.959	T	0.000	T	0.024	-1.199	0.073	2.63	0.269	1.003	5.706	-1.198838	NA	1	0.501512	0.423059	NA	0.377	NA	7.9148214
861	1	6313938	6313938	C	T	exonic	GPR153	NA	nonsynonymous SNV	GPR153:NM_207370:exon3:c.G626A:p.R209H	exonic	ENSG00000158292	NA	nonsynonymous SNV	ENSG00000158292:ENST00000377893:exon3:c.G626A:p.R209H	Score=325;Name=lod=28	NA	1p36.31	NA	NA	NA	NA	rs12735670	0.69	0.69	NA	0.699081	0.7117	0.6131	0.7939	0.702	0.7035	0.72	0.59	0.77	0.69	0.7075	0.77	0.44	T	0.012	B	0.011	B	0.002	N	0.411	P	0.345	N	0.97	T	-1.009	T	0.000	T	0.146	0.246	5.326	2.03	0.147	0.366	7.468	0.245509	NA	0.31	NA	NA	NA	0.587	NA	7.9141334
861	1	144906508	144906508	C	T	exonic	PDE4DIP	NA	nonsynonymous SNV	PDE4DIP:NM_001002811:exon14:c.G2838A:p.M946I,PDE4DIP:NM_001002812:exon18:c.G2349A:p.M783I,PDE4DIP:NM_001198834:exon18:c.G2349A:p.M783I,PDE4DIP:NM_014644:exon18:c.G2349A:p.M783I,PDE4DIP:NM_001198832:exon21:c.G2547A:p.M849I	exonic	ENSG00000178104	NA	nonsynonymous SNV	ENSG00000178104:ENST00000313431:exon14:c.G2838A:p.M946I,ENSG00000178104:ENST00000479408:exon14:c.G1710A:p.M570I,ENSG00000178104:ENST00000529945:exon14:c.G2838A:p.M946I,ENSG00000178104:ENST00000369349:exon18:c.G2349A:p.M783I,ENSG00000178104:ENST00000369351:exon18:c.G2349A:p.M783I,ENSG00000178104:ENST00000369354:exon18:c.G2349A:p.M783I,ENSG00000178104:ENST00000369356:exon18:c.G2349A:p.M783I,ENSG00000178104:ENST00000313382:exon21:c.G2547A:p.M849I,ENSG00000178104:ENST00000369359:exon21:c.G2760A:p.M920I,ENSG00000178104:ENST00000530740:exon21:c.G2760A:p.M920I	Score=487;Name=lod=127	NA	1q21.1	NA	NA	NA	NA	rs34169189	0.09	0.09	0.055	0.0932508	0.1342	0.0268	0.1974	0.0227	0.1411	0.13	0.02	0.19	0.02	0.1434	0.19	0.92	T	0.028	B	0.009	B	.	.	0.000	P	0.205	N	4.94	T	-0.915	T	0.004	T	0.179	1.407	10.64	1.96	0.929	-0.084	3.615	1.407063	1.407063	0.37	0.147449	0.040626	NA	0.145	NA	7.9082844
861	12	49579696	49579696	C	G	exonic	TUBA1A	NA	synonymous SNV	TUBA1A:NM_001270399:exon4:c.G453C:p.S151S,TUBA1A:NM_001270400:exon4:c.G348C:p.S116S,TUBA1A:NM_006009:exon4:c.G453C:p.S151S	exonic	ENSG00000167552	NA	nonsynonymous SNV	ENSG00000167552:ENST00000546918:exon3:c.G605C:p.R202P	Score=658;Name=lod=628	NA	12q13.12	Score=784;Name=V$PAX5_01	NA	NA	NA	rs697624	0.51	0.51	0.54	0.547724	0.3429	0.6885	0.3588	0.6717	0.5798	0.34	0.71	0.37	0.63	0.4203	0.71	0.1	T	.	.	.	.	.	.	0.000	P	.	.	0.02	T	-0.950	T	0.000	T	.	0.29	5.57	0.167	-0.094	0.270	6.791	0.289991	NA	NA	0.328834	0.642306	NA	0.514	NA	7.907966
861	1	151820324	151820324	T	C	exonic	THEM5	NA	nonsynonymous SNV	THEM5:NM_182578:exon5:c.A590G:p.D197G	exonic	ENSG00000196407	NA	nonsynonymous SNV	ENSG00000196407:ENST00000368817:exon5:c.A590G:p.D197G	Score=295;Name=lod=21	NA	1q21.3	NA	NA	NA	NA	rs6587625	0.8	0.8	0.749	0.777955	0.833	0.6815	0.8674	0.8752	0.6258	0.83	0.66	0.85	0.87	0.7861	0.87	1	T	0.0	B	0.0	B	0.001	N	1.000	P	-1.27	N	2.71	T	-0.965	T	0.009	T	0.531	-1.507	0.017	4.17	1.160	0.635	7.141	-1.506755	NA	0.88	0.808605	0.858375	NA	0.754	NA	7.9056284
862	4	2194946	2194946	C	T	exonic	POLN	NA	nonsynonymous SNV	POLN:NM_181808:exon5:c.G1006A:p.G336S	exonic	ENSG00000130997	NA	nonsynonymous SNV	ENSG00000130997:ENST00000382865:exon5:c.G1006A:p.G336S,ENSG00000130997:ENST00000511885:exon7:c.G1006A:p.G336S	NA	NA	4p16.3	Score=816;Name=V$CMYB_01	NA	NA	NA	rs10011549	0.32	0.32	0.31	0.330671	0.1243	0.372	0.2464	0.6029	0.1922	0.13	0.37	0.25	0.61	0.1906	0.61	0.53	T	0.014	B	0.009	B	0.560	N	1.000	P	0.92	L	3.54	T	-0.974	T	0.000	T	0.181	-0.15	3.265	0.379	0.249	-0.334	3.146	-0.150292	NA	0.42	0.115349	0.535195	NA	0.384	NA	7.9030844
862	19	10131999	10131999	T	C	exonic	RDH8	NA	nonsynonymous SNV	RDH8:NM_015725:exon5:c.T665C:p.M222T	exonic	ENSG00000080511	NA	nonsynonymous SNV	ENSG00000080511:ENST00000587782:exon2:c.T50C:p.M17T,ENSG00000080511:ENST00000171214:exon5:c.T605C:p.M202T,ENSG00000080511:ENST00000591589:exon5:c.T665C:p.M222T	NA	NA	19p13.2	NA	NA	NA	NA	rs1644731	0.53	0.53	0.524	0.589657	0.4563	0.5635	0.5648	0.649	0.6912	0.44	0.59	0.5	0.63	0.5202	0.63	0.58	T	0.0	B	0.0	B	0.365	N	1.000	P	-1.59	N	-3.1	D	-0.942	T	0.000	T	0.023	-0.363	2.288	-2.05	-0.396	-0.457	3.249	-0.363067	NA	0.24	0.454302	0.616205	NA	0.514	NA	7.9025314
862	19	35434448	35434448	A	G	exonic	ZNF30	NA	nonsynonymous SNV	ZNF30:NM_001099437:exon5:c.A581G:p.K194R,ZNF30:NM_001099438:exon5:c.A581G:p.K194R,ZNF30:NM_194325:exon5:c.A578G:p.K193R	exonic	ENSG00000168661	NA	nonsynonymous SNV	ENSG00000168661:ENST00000303586:exon5:c.A581G:p.K194R,ENSG00000168661:ENST00000439785:exon5:c.A581G:p.K194R,ENSG00000168661:ENST00000601142:exon5:c.A578G:p.K193R,ENSG00000168661:ENST00000426813:exon6:c.A335G:p.K112R	NA	NA	19q13.11	NA	NA	NA	NA	rs62122088	0.09	0.09	0.095	0.0852636	0.1551	0.0635	0.0403	0.0628	0.0982	0.16	0.05	0.05	0.06	0.1271	0.16	0.69	T	0.013	B	0.009	B	.	.	1.000	P	-0.215	N	2.57	T	-0.931	T	0.000	T	0.178	-1.464	0.019	-0.026	-0.220	-2.896	2.711	-1.464275	NA	0.72	0.150036	0.075772	NA	0.087	NA	7.9010974
862	19	52468203	52468203	T	A	exonic	ZNF350	NA	nonsynonymous SNV	ZNF350:NM_021632:exon5:c.A1503T:p.R501S	exonic	ENSG00000256683	NA	nonsynonymous SNV	ENSG00000256683:ENST00000243644:exon5:c.A1503T:p.R501S	NA	NA	19q13.41	NA	NA	NA	NA	rs2278415	0.16	0.16	0.165	0.175719	0.1471	0.2331	0.1297	0.1029	0.2771	0.16	0.2	0.11	0.12	0.1587	0.2	0.02	D	0.064	B	0.032	B	.	.	1.000	P	0.695	N	3.47	T	-0.953	T	0.000	T	0.105	2.544	14.47	1.96	0.234	-0.260	7.252	2.543957	2.543957	0	0.127442	0.143214	NA	0.116	NA	7.9000914
862	7	142498813	142498813	G	A	intergenic	PRSS3P2,EPHB6	dist=16414;dist=53979	NA	NA	exonic	ENSG00000211772	NA	unknown	UNKNOWN	Score=472;Name=lod=110	NA	7q34	Score=784;Name=V$MIF1_01	Name=E2F6_(H-50),USF-1,THAP1_(SC-98174)	Name=7	NA	rs1042955	NA	NA	0.204	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2671	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.579659	1.579659	NA	NA	NA	NA	0.297	NA	7.8995667
862	7	150500729	150500729	A	G	exonic	TMEM176A	NA	nonsynonymous SNV	TMEM176A:NM_018487:exon5:c.A364G:p.T122A	exonic	ENSG00000002933	NA	nonsynonymous SNV	ENSG00000002933:ENST00000461345:exon4:c.A187G:p.T63A,ENSG00000002933:ENST00000468689:exon4:c.A187G:p.T63A,ENSG00000002933:ENST00000475536:exon4:c.A220G:p.T74A,ENSG00000002933:ENST00000004103:exon5:c.A364G:p.T122A,ENSG00000002933:ENST00000484928:exon5:c.A364G:p.T122A	NA	NA	7q36.1	NA	NA	NA	NA	rs741064	0.89	0.89	0.89	0.90016	0.8002	0.9365	0.879	0.9856	0.865	0.8	0.94	0.87	0.98	0.8397	0.98	0.53	T	0.0	B	0.0	B	0.508	N	1.000	P	-0.145	N	4.38	T	-1.083	T	0.000	T	0.083	-0.238	2.854	-3.79	-1.335	-1.289	3.659	-0.237626	NA	0	0.794186	0.958466	ID=COSM1163465;OCCURENCE=1(pancreas)	0.768	NA	7.8992474
862	3	52833805	52833805	C	A	exonic	ITIH3	NA	nonsynonymous SNV	ITIH3:NM_002217:exon9:c.C943A:p.Q315K	exonic	ENSG00000162267	NA	nonsynonymous SNV	ENSG00000162267:ENST00000416872:exon9:c.C943A:p.Q315K,ENSG00000162267:ENST00000449956:exon9:c.C943A:p.Q315K	NA	NA	3p21.1	NA	NA	NA	NA	rs3617	0.57	0.57	0.585	0.54373	0.4841	0.4137	0.6095	0.7663	0.3916	0.49	0.47	0.62	0.74	0.4848	0.74	0.55	T	0.0	B	0.0	B	0.001	N	1.000	P	-1.02	N	-1.65	D	-0.918	T	0.000	T	0.063	-0.565	1.453	4.15	0.453	0.355	11.865	-0.564539	NA	0.47	0.465555	0.710137	ID=COSM1617892,COSM1617893;OCCURENCE=1(liver)	0.529	NA	7.8988784
862	18	21481233	21481233	C	G	exonic	LAMA3	NA	synonymous SNV	LAMA3:NM_001127718:exon10:c.C1152G:p.A384A,LAMA3:NM_000227:exon11:c.C1320G:p.A440A,LAMA3:NM_001127717:exon47:c.C5979G:p.A1993A,LAMA3:NM_198129:exon48:c.C6147G:p.A2049A	exonic	ENSG00000053747	NA	synonymous SNV	ENSG00000053747:ENST00000587184:exon10:c.C1152G:p.A384A,ENSG00000053747:ENST00000269217:exon11:c.C1320G:p.A440A,ENSG00000053747:ENST00000399516:exon47:c.C5979G:p.A1993A,ENSG00000053747:ENST00000313654:exon48:c.C6147G:p.A2049A	Score=336;Name=lod=31	NA	18q11.2	NA	Name=GATA-2,ERalpha_a	Name=46	NA	rs1154226	0.18	0.18	0.163	0.168331	0.2624	0.1885	0.1902	0.0151	0.2423	0.27	0.17	0.2	0.03	0.2343	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.000159	NA	NA	0.271163	0.057649	ID=COSM1179776,COSM1179775;OCCURENCE=1(prostate)	0.174	NA	7.8988036
862	16	27474910	27474910	A	G	exonic	GTF3C1	NA	nonsynonymous SNV	GTF3C1:NM_001520:exon35:c.T5876C:p.F1959S	exonic	ENSG00000077235	NA	nonsynonymous SNV	ENSG00000077235:ENST00000356183:exon35:c.T5876C:p.F1959S,ENSG00000077235:ENST00000561623:exon35:c.T5801C:p.F1934S	NA	NA	16p12.1	NA	NA	NA	NA	rs12919017	0.09	0.09	0.077	0.0686901	0.161	0.001	0.1844	0.0098	0.0409	0.17	NA	0.16	0.01	0.1215	0.17	0.46	T	0.0	B	0.002	B	0.001	N	1.000	P	1.1	L	2.06	T	-1.017	T	0.000	T	0.243	1.523	11.04	-2.26	-0.496	0.195	5.735	1.522915	1.522915	0.04	0.152442	0.039827	NA	0.036	NA	7.8983914
862	16	30536672	30536672	A	G	exonic	ZNF768	NA	synonymous SNV	ZNF768:NM_024671:exon2:c.T789C:p.C263C	exonic	ENSG00000169957	NA	synonymous SNV	ENSG00000169957:ENST00000380412:exon2:c.T789C:p.C263C,ENSG00000169957:ENST00000562803:exon2:c.T696C:p.C232C	Score=497;Name=lod=139	NA	16p11.2	Score=896;Name=V$TAL1ALPHAE47_01	Name=Pol2	Name=5	NA	rs3751847	0.53	0.53	0.564	0.631589	0.5924	0.1468	0.4424	0.9644	0.8558	0.57	0.11	0.5	0.96	0.5768	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.133477	NA	NA	0.60093	0.887574	NA	0.659	NA	7.8965366
862	14	65747759	65747759	A	G	intergenic	MAX,MIR4708	dist=178497;dist=54077	NA	NA	ncRNA_exonic	ENSG00000259078	NA	NA	NA	Score=567;Name=lod=269	Name=Conduct disorder (symptom count)	14q23.3	NA	Name=CTCFL_(SC-98982)	Name=2	NA	rs1256531	0.25	0.25	0.247	0.294728	0.1044	0.1875	0.1744	0.5968	0.2781	0.11	0.19	0.15	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.704341	NA	NA	NA	NA	NA	0.261	NA	7.8956
862	19	55713535	55713535	G	A	exonic	PTPRH	NA	nonsynonymous SNV	PTPRH:NM_001161440:exon4:c.C508T:p.H170Y,PTPRH:NM_002842:exon6:c.C1042T:p.H348Y	exonic	ENSG00000080031	NA	nonsynonymous SNV	ENSG00000080031:ENST00000263434:exon4:c.C508T:p.H170Y,ENSG00000080031:ENST00000376350:exon6:c.C1042T:p.H348Y	NA	NA	19q13.42	NA	NA	NA	NA	rs2288515	0.55	0.55	0.518	0.571286	0.4871	0.4236	0.5879	0.7874	0.5061	0.5	0.42	0.56	0.78	0.4944	0.78	0.9	T	0.027	B	0.01	B	.	.	1.000	P	0	N	0.4	T	-0.939	T	0.000	T	0.09	2.865	15.54	-2.67	-0.475	-2.591	0.962	2.865307	2.865307	0.07	0.456395	0.723332	NA	0.507	NA	7.8954384
862	22	45749983	45749983	G	T	exonic	SMC1B	NA	nonsynonymous SNV	SMC1B:NM_148674:exon21:c.C3148A:p.L1050M	exonic	ENSG00000077935	NA	nonsynonymous SNV	ENSG00000077935:ENST00000357450:exon21:c.C3148A:p.L1050M,ENSG00000077935:ENST00000404354:exon21:c.C3148A:p.L1050M	Score=536;Name=lod=202	NA	22q13.31	NA	NA	NA	NA	rs5764698	0.35	0.35	0.305	0.288139	0.492	0.2946	0.4654	0.0477	0.271	0.5	0.33	0.43	0.06	0.4289	0.52	0.11	T	0.0	B	0.003	B	0.392	N	1.000	P	0.345	N	-1.04	T	-0.959	T	0.000	T	0.025	1.67	11.54	2.38	0.107	0.418	2.741	1.670439	1.670439	0.22	0.517351	0.114432	NA	0.196	NA	7.8950824
863	3	169492101	169492101	C	T	exonic	MYNN	NA	synonymous SNV	MYNN:NM_001185119:exon1:c.C18T:p.H6H,MYNN:NM_018657:exon2:c.C18T:p.H6H,MYNN:NM_001185118:exon3:c.C18T:p.H6H	exonic	ENSG00000085274	NA	synonymous SNV	ENSG00000085274:ENST00000544106:exon1:c.C18T:p.H6H,ENSG00000085274:ENST00000349841:exon2:c.C18T:p.H6H,ENSG00000085274:ENST00000392733:exon2:c.C18T:p.H6H,ENSG00000085274:ENST00000602751:exon2:c.C18T:p.H6H,ENSG00000085274:ENST00000356716:exon3:c.C18T:p.H6H	Score=619;Name=lod=438	Name=Colorectal cancer,Celiac disease,Telomere length,Multiple sclerosis	3q26.2	NA	NA	Name=8	NA	rs10936599	0.3	0.3	0.276	0.270567	0.2425	0.5784	0.3545	0.0371	0.2382	0.25	0.58	0.29	0.07	0.2818	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.258938	1.258938	NA	0.247442	0.069224	NA	0.159	NA	7.8949246
863	5	70806649	70806649	T	A	exonic	BDP1	NA	nonsynonymous SNV	BDP1:NM_018429:exon17:c.T3730A:p.F1244I	exonic	ENSG00000145734	NA	nonsynonymous SNV	ENSG00000145734:ENST00000358731:exon17:c.T3730A:p.F1244I	NA	NA	5q13.2	NA	NA	NA	NA	rs1961760	0.42	0.42	0.429	0.439896	0.492	0.379	0.3444	0.4107	0.5562	0.5	0.39	0.35	0.4	0.4632	0.5	0.23	T	0.0	B	0.0	B	0.060	N	1.000	P	-1.61	N	2.84	T	-0.918	T	0.000	T	0.019	-0.866	0.512	-4.49	-1.348	-0.869	3.264	-0.86593	NA	0.63	0.483448	0.386823	ID=COSM1132128;OCCURENCE=1(prostate)	0.406	NA	7.8946854
863	19	41386033	41386033	T	C	exonic	CYP2A7	NA	nonsynonymous SNV	CYP2A7:NM_030589:exon3:c.A457G:p.M153V,CYP2A7:NM_000764:exon4:c.A610G:p.M204V	exonic	ENSG00000198077	NA	nonsynonymous SNV	ENSG00000198077:ENST00000291764:exon3:c.A457G:p.M153V,ENSG00000198077:ENST00000301146:exon4:c.A610G:p.M204V	NA	NA	19q13.2	NA	NA	NA	NA	rs73032311	0.14	0.14	0.127	0.113618	0.1441	0.1796	0.0807	0.0802	0.0828	0.15	0.19	0.09	0.1	0.136	0.19	0.16	T	0.105	B	0.039	B	0.001	U	1.000	P	1.11	L	-0.32	T	-1.111	T	0.000	T	0.232	0.288	5.558	0.761	0.000	1.082	4.863	0.287753	NA	0.03	0.158953	0.092601	NA	0.072	NA	7.8942804
863	3	16364954	16364954	C	T	exonic	RFTN1	NA	nonsynonymous SNV	RFTN1:NM_015150:exon9:c.G1261A:p.V421I	exonic	ENSG00000131378	NA	nonsynonymous SNV	ENSG00000131378:ENST00000607320:exon2:c.G106A:p.V36I,ENSG00000131378:ENST00000432519:exon8:c.G1153A:p.V385I,ENSG00000131378:ENST00000334133:exon9:c.G1261A:p.V421I	NA	NA	3p25.1	NA	NA	NA	NA	rs11554130	0.19	0.19	0.22	0.198083	0.1551	0.0258	0.1124	0.5204	0.045	0.15	0.02	0.12	0.5	0.1418	0.5	0.08	T	0.082	B	0.067	B	0.006	N	0.507	P	1.935	M	1.47	T	-0.951	T	0.000	T	0.009	2.155	13.16	0.123	0.264	0.214	3.686	2.154612	2.154612	0.06	0.143023	0.447345	NA	0.268	NA	7.8934104
863	19	36303664	36303664	G	C	exonic	PRODH2	NA	nonsynonymous SNV	PRODH2:NM_021232:exon2:c.C272G:p.P91R	exonic	ENSG00000250799	NA	nonsynonymous SNV	ENSG00000250799:ENST00000301175:exon2:c.C272G:p.P91R	NA	NA	19q13.12	NA	Name=Pol2,HEY1,TBP,Sin3Ak-20	NA	NA	rs3848666	0.08	0.08	0.067	0.0543131	0.1561	NA	0.0965	0.0061	0.0409	0.15	NA	0.12	0.01	0.1185	0.17	0.21	T	0.004	B	0.002	B	.	.	1.000	P	0.205	N	1.89	T	-0.996	T	0.000	T	0.038	0.415	6.252	0.647	0.103	0.765	6.956	0.414685	NA	0.14	0.165698	0.033364	NA	0.138	NA	7.8930354
863	3	153840389	153840389	T	C	exonic	ARHGEF26	NA	nonsynonymous SNV	ARHGEF26:NM_001251962:exon2:c.T608C:p.F203S,ARHGEF26:NM_001251963:exon2:c.T608C:p.F203S,ARHGEF26:NM_015595:exon2:c.T608C:p.F203S	exonic	ENSG00000114790	NA	nonsynonymous SNV	ENSG00000114790:ENST00000356448:exon2:c.T608C:p.F203S,ENSG00000114790:ENST00000465093:exon2:c.T608C:p.F203S,ENSG00000114790:ENST00000465817:exon2:c.T608C:p.F203S,ENSG00000114790:ENST00000496710:exon2:c.T608C:p.F203S	NA	NA	3q25.2	NA	NA	NA	NA	rs13096373	0.33	0.33	0.32	0.324281	0.1103	0.4514	0.3415	0.469	0.2055	0.11	0.48	0.33	0.51	0.2109	0.51	1	T	0.0	B	0.0	B	0.015	N	1.000	P	-0.805	N	2.67	T	-0.919	T	0.000	T	0.062	-1.751	0.01	3.91	0.867	0.431	5.579	-1.750579	NA	1	0.120859	0.389532	NA	0.283	NA	7.8912744
863	19	2226772	2226772	G	C	exonic	DOT1L	NA	nonsynonymous SNV	DOT1L:NM_032482:exon27:c.G4252C:p.V1418L	exonic	ENSG00000104885	NA	nonsynonymous SNV	ENSG00000104885:ENST00000457590:exon4:c.G892C:p.V298L,ENSG00000104885:ENST00000398665:exon27:c.G4252C:p.V1418L	NA	NA	19p13.3	NA	NA	NA	NA	rs2302061	0.25	0.25	0.167	0.255791	0.1441	0.25	0.1715	0.4289	0.2025	0.16	0.28	0.17	0.41	0.1885	0.41	0	D	0.0	B	0.0	B	0.019	N	1.000	P	-1.04	N	2.07	T	-0.908	T	0.000	T	0.018	-1.06	0.183	0.147	-0.033	0.735	3.255	-1.060185	NA	1	0.109942	0.356562	NA	0.21	NA	7.8907914
863	1	248224294	248224294	C	T	exonic	OR2L3	NA	nonsynonymous SNV	OR2L3:NM_001004687:exon1:c.C311T:p.S104L	exonic	ENSG00000198128	NA	nonsynonymous SNV	ENSG00000198128:ENST00000359959:exon1:c.C311T:p.S104L	NA	NA	1q44	NA	NA	NA	NA	rs6658256	0.26	0.26	0.282	0.310503	0.1481	0.254	0.1326	0.7398	0.0818	0.12	0.27	0.12	0.59	0.1828	0.6	1	T	0.0	B	0.0	B	0.023	N	1.000	P	-1.715	N	5.0	T	-1.059	T	0.000	T	0.037	-2.116	0.006	-2.42	-0.429	-0.918	5.010	-2.11565	NA	1	0.112791	0.600091	NA	0.29	NA	7.8896424
863	7	76131645	76131645	A	G	exonic	DTX2	NA	nonsynonymous SNV	DTX2:NM_001102596:exon5:c.A1120G:p.T374A,DTX2:NM_001102595:exon7:c.A1261G:p.T421A,DTX2:NM_001102594:exon8:c.A1261G:p.T421A,DTX2:NM_020892:exon9:c.A1261G:p.T421A	exonic	ENSG00000091073	NA	nonsynonymous SNV	ENSG00000091073:ENST00000446820:exon5:c.A1120G:p.T374A,ENSG00000091073:ENST00000413936:exon7:c.A1261G:p.T421A,ENSG00000091073:ENST00000446600:exon7:c.A988G:p.T330A,ENSG00000091073:ENST00000307569:exon8:c.A1120G:p.T374A,ENSG00000091073:ENST00000430490:exon8:c.A1261G:p.T421A,ENSG00000091073:ENST00000324432:exon9:c.A1261G:p.T421A	NA	NA	7q11.23	NA	NA	NA	NA	rs6979487	0.74	0.74	NA	0.816094	0.6938	0.9454	0.8357	0.8268	0.7802	0.61	0.88	0.75	0.74	0.7506	0.88	1	T	0.0	B	0.002	B	0.369	N	1.000	P	0.255	N	-2.09	D	-0.924	T	0.000	T	0.18	-1.469	0.018	-2.89	-0.454	0.127	1.623	-1.469051	NA	0.9	NA	NA	NA	0.246	NA	7.8889334
863	18	52258548	52258548	T	C	exonic	DYNAP	NA	nonsynonymous SNV	DYNAP:NM_173629:exon1:c.T113C:p.V38A	exonic	ENSG00000178690	NA	nonsynonymous SNV	ENSG00000178690:ENST00000321600:exon1:c.T113C:p.V38A,ENSG00000178690:ENST00000585973:exon2:c.T122C:p.V41A	NA	NA	18q21.2	NA	NA	NA	NA	rs35428499	0.11	0.11	0.116	0.116613	0.1551	0.0288	0.0865	0.1483	0.1462	0.16	0.03	0.12	0.14	0.1405	0.16	0.02	D	0.093	B	0.077	B	0.728	N	1.000	P	-0.14	N	2.02	T	-0.965	T	0.000	T	0.198	-0.017	3.925	-1.32	-0.133	-0.159	9.270	-0.017299	NA	0.02	0.151163	0.154108	NA	0.116	NA	7.8865704
863	14	77845121	77845121	A	G	exonic	SAMD15	NA	nonsynonymous SNV	SAMD15:NM_001010860:exon1:c.A1360G:p.K454E	exonic	ENSG00000100583	NA	nonsynonymous SNV	ENSG00000100583:ENST00000216471:exon1:c.A1360G:p.K454E	NA	NA	14q24.3	NA	NA	NA	NA	rs2193595	0.48	0.48	0.504	0.512979	0.497	0.0883	0.4841	0.888	0.4806	0.49	0.08	0.54	0.89	0.4823	0.89	1	T	0.0	B	0.0	B	.	.	1.000	P	-0.2	N	1.37	T	-0.979	T	0.000	T	0.006	-1.455	0.019	-2.42	-0.675	-0.968	3.790	-1.454591	NA	0.72	0.467791	0.822969	ID=COSM147821;OCCURENCE=1(stomach)	0.616	NA	7.8862424
863	1	160000435	160000435	A	T	exonic	PIGM	NA	nonsynonymous SNV	PIGM:NM_145167:exon1:c.T1095A:p.F365L	exonic	ENSG00000143315	NA	nonsynonymous SNV	ENSG00000143315:ENST00000368090:exon1:c.T1095A:p.F365L	NA	NA	1q23.2	NA	NA	NA	NA	rs12409352	0.08	0.08	0.071	0.0680911	0.1292	0.0357	0.1182	0.0091	0.0828	0.13	0.05	0.12	0.02	0.1405	0.18	.	.	0.107	B	0.078	B	0.000	D	0.125	P	0.755	N	1.12	T	-1.027	T	0.027	T	0.209	1.609	11.34	-0.827	-0.155	-0.710	10.541	1.609087	1.609087	0.21	0.177674	0.035179	NA	0.196	NA	7.8859594
863	19	21300462	21300462	A	G	exonic	ZNF714	NA	nonsynonymous SNV	ZNF714:NM_182515:exon5:c.A992G:p.K331R	exonic	ENSG00000160352	NA	nonsynonymous SNV	ENSG00000160352:ENST00000596143:exon5:c.A992G:p.K331R,ENSG00000160352:ENST00000600435:exon5:c.A992G:p.K331R	Score=466;Name=lod=104	NA	19p12	NA	NA	NA	NA	rs2884554	0.7	0.7	0.648	0.669529	0.8191	0.8611	0.8084	0.2035	0.8497	0.8	0.88	0.79	0.24	0.7877	0.88	0.17	T	0.999	D	0.969	D	.	.	1.000	P	0.075	N	.	.	-0.967	T	0.000	T	0.164	1.68	11.58	0.955	0.378	0.131	4.700	1.680248	1.680248	0.23	0.841281	0.351533	NA	0.688	NA	7.8852524
864	16	81242102	81242102	G	A	exonic	PKD1L2	NA	nonsynonymous SNV	PKD1L2:NM_001076780:exon4:c.C754T:p.R252W	exonic	ENSG00000166473,ENSG00000269323	NA	nonsynonymous SNV	ENSG00000166473:ENST00000337114:exon4:c.C754T:p.R252W,ENSG00000269323:ENST00000599697:exon4:c.C754T:p.R252W	NA	NA	16q23.2	NA	NA	NA	NA	rs6420424	0.59	0.59	0.57	0.565495	0.4632	0.881	0.5086	0.4629	0.5245	0.49	0.86	0.5	0.48	0.5172	0.86	0.1	T	0.015	B	0.003	B	0.090	N	1.000	P	.	.	4.94	T	-1.009	T	0.000	T	0.386	-0.21	2.983	2.0	0.223	1.700	2.971	-0.209849	NA	0	0.468513	0.443437	NA	0.457	NA	7.8844204
864	11	100226883	100226883	T	A	exonic	CNTN5	NA	nonsynonymous SNV	CNTN5:NM_175566:exon22:c.T3013A:p.S1005T,CNTN5:NM_001243270:exon24:c.T3235A:p.S1079T,CNTN5:NM_014361:exon25:c.T3235A:p.S1079T	exonic	ENSG00000149972	NA	nonsynonymous SNV	ENSG00000149972:ENST00000418526:exon22:c.T3013A:p.S1005T,ENSG00000149972:ENST00000279463:exon23:c.T3235A:p.S1079T,ENSG00000149972:ENST00000528682:exon24:c.T3235A:p.S1079T,ENSG00000149972:ENST00000524871:exon25:c.T3235A:p.S1079T	NA	NA	11q22.1	NA	NA	Name=6	NA	rs1216183	0.29	0.29	0.292	0.327077	0.1193	0.3313	0.2896	0.531	0.2873	0.12	0.34	0.26	0.52	0.224	0.52	.	.	0.0	B	0.0	B	0.127	N	1.000	P	0	N	0.58	T	-0.917	T	0.000	T	0.102	-1.184	0.081	1.5	-0.254	-0.013	0.953	-1.183514	NA	0.75	0.106311	0.428285	NA	0.297	NA	7.8837224
864	5	160097496	160097496	A	G	exonic	ATP10B	NA	nonsynonymous SNV	ATP10B:NM_025153:exon7:c.T649C:p.C217R	exonic	ENSG00000118322	NA	nonsynonymous SNV	ENSG00000118322:ENST00000327245:exon7:c.T649C:p.C217R	Score=545;Name=lod=219	NA	5q34	NA	NA	NA	NA	rs958912	0.84	0.84	0.856	0.861621	0.8082	0.8938	0.7118	0.9304	0.8967	0.81	0.9	0.72	0.91	0.8212	0.92	.	.	0.0	B	0.0	B	0.019	N	0.998	P	-2.1	N	-0.79	T	-0.977	T	0.000	T	0.016	-0.251	2.794	2.34	0.023	1.538	6.222	-0.250728	NA	0.62	0.821059	0.921563	NA	0.891	NA	7.8828744
864	12	52435632	52435632	A	C	UTR5	NR4A1	NM_001202233:c.-45A>C	NA	NA	exonic	ENSG00000123358	NA	synonymous SNV	ENSG00000123358:ENST00000545748:exon2:c.A79C:p.R27R	Score=389;Name=lod=51	NA	12q13.13	NA	Name=CTCF,NRSF	Name=88	NA	rs138157115	0.02	0.02	0.011	0.0139776	0.0348	NA	0.036	0.0038	0.0051	0.04	NA	0.04	0.002	0.0504	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.279005	NA	NA	0.034474	0.010286	NA	0.007	NA	7.880326
864	12	11286088	11286088	A	C	exonic	TAS2R30	NA	nonsynonymous SNV	TAS2R30:NM_001097643:exon1:c.T756G:p.F252L	exonic	ENSG00000256188	NA	nonsynonymous SNV	ENSG00000256188:ENST00000539585:exon1:c.T756G:p.F252L	NA	NA	12p13.2	NA	NA	NA	NA	rs2599404	0.4	0.4	0.361	0.351238	0.5109	0.1944	0.4697	0.357	0.2566	0.53	0.22	0.44	0.37	0.4391	0.53	0.7	T	.	.	.	.	.	.	1.000	P	.	.	1.28	T	-0.904	T	0.000	T	0.018	-2.76	0	-3.51	-0.589	-1.060	0.353	-2.760374	NA	NA	0.503838	0.377384	NA	0.406	NA	7.8794954
864	11	118430519	118430519	C	T	exonic	IFT46	NA	nonsynonymous SNV	IFT46:NM_001168618:exon3:c.G26A:p.C9Y,IFT46:NM_020153:exon3:c.G26A:p.C9Y	exonic	ENSG00000118096	NA	nonsynonymous SNV	ENSG00000118096:ENST00000531939:exon1:c.G26A:p.C9Y,ENSG00000118096:ENST00000264020:exon3:c.G26A:p.C9Y,ENSG00000118096:ENST00000264021:exon3:c.G26A:p.C9Y,ENSG00000118096:ENST00000528378:exon3:c.G26A:p.C9Y,ENSG00000118096:ENST00000530872:exon3:c.G26A:p.C9Y,ENSG00000118096:ENST00000534114:exon3:c.G26A:p.C9Y,ENSG00000118096:ENST00000534156:exon3:c.G26A:p.C9Y,ENSG00000118096:ENST00000533918:exon4:c.G26A:p.C9Y	Score=493;Name=lod=134	NA	11q23.3	NA	NA	NA	NA	rs11552421	0.24	0.24	0.232	0.27496	0.1352	0.5585	0.0821	0.2073	0.3548	0.14	0.52	0.09	0.18	0.1864	0.52	1	T	0.0	B	0.0	B	0.191	N	1.000	P	-0.805	N	1.08	T	-0.927	T	0.000	T	0.269	-0.844	0.564	1.48	0.092	0.084	4.510	-0.844017	NA	1	0.13248	0.198636	NA	0.203	NA	7.8792534
864	4	69536084	69536084	A	C	exonic	UGT2B15	NA	nonsynonymous SNV	UGT2B15:NM_001076:exon1:c.T253G:p.Y85D	exonic	ENSG00000196620	NA	nonsynonymous SNV	ENSG00000196620:ENST00000338206:exon1:c.T253G:p.Y85D	NA	NA	4q13.2	NA	NA	NA	NA	rs1902023	0.56	0.56	0.542	0.546526	0.4871	0.5774	0.6052	0.6021	0.4591	0.48	0.58	0.61	0.64	0.5024	0.64	0.64	T	0.0	B	0.0	B	0.750	N	1.000	P	-1.16	N	0.51	T	-0.937	T	0.000	T	0.024	-2.341	0.004	2.58	0.401	-1.341	3.332	-2.341011	NA	0.78	0.464859	0.575909	NA	0.616	NA	7.8789744
864	16	2260567	2260567	C	T	exonic	BRICD5	NA	nonsynonymous SNV	BRICD5:NM_182563:exon2:c.G136A:p.V46I	exonic	ENSG00000182685	NA	nonsynonymous SNV	ENSG00000182685:ENST00000328540:exon2:c.G136A:p.V46I,ENSG00000182685:ENST00000562360:exon2:c.G136A:p.V46I,ENSG00000182685:ENST00000566018:exon2:c.G136A:p.V46I	NA	NA	16p13.3	Score=740;Name=V$PAX4_04	Name=NRSF	NA	NA	rs26857	0.52	0.52	0.47	0.515575	0.4702	0.6032	0.4841	0.497	0.5194	0.47	0.61	0.46	0.51	0.516	0.61	0.97	T	0.004	B	0.009	B	0.252	N	1.000	P	-0.345	N	1.87	T	-0.937	T	0.000	T	0.156	-1.389	0.024	1.17	0.298	0.241	4.464	-1.388868	NA	0.75	0.469259	0.497722	ID=COSM329187;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.442	NA	7.8778744
864	20	4705718	4705718	C	T	exonic	PRND	NA	nonsynonymous SNV	PRND:NM_012409:exon2:c.C521T:p.T174M	exonic	ENSG00000171864	NA	nonsynonymous SNV	ENSG00000171864:ENST00000305817:exon2:c.C521T:p.T174M	NA	NA	20p13	NA	NA	NA	NA	rs2245220	0.46	0.46	0.478	0.495208	0.4871	0.253	0.3646	0.6702	0.6094	0.49	0.26	0.39	0.7	0.4799	0.7	0.18	T	0.0	B	0.0	B	0.605	N	1.000	P	-0.55	N	-2.41	D	-0.937	T	0.000	T	0.023	0.961	8.922	2.23	0.253	0.864	3.770	0.961269	NA	0.13	0.488827	0.635043	ID=COSM1412276;OCCURENCE=1(large_intestine)	0.471	NA	7.8775064
864	11	113270160	113270160	A	G	exonic	ANKK1	NA	nonsynonymous SNV	ANKK1:NM_178510:exon8:c.A1469G:p.H490R	exonic	ENSG00000170209	NA	nonsynonymous SNV	ENSG00000170209:ENST00000303941:exon8:c.A1469G:p.H490R	NA	NA	11q23.2	NA	NA	NA	NA	rs2734849	0.27	0.27	0.257	0.245008	0.504	0.0625	0.3098	0.1044	0.3108	0.49	0.06	0.36	0.12	0.4502	0.5	0.75	T	0.0	B	0.003	B	0.721	N	1.000	P	-1.89	N	2.47	T	-0.903	T	0.000	T	0.026	-1.495	0.017	-9.31	-2.467	-0.114	17.949	-1.494949	NA	0.44	0.50167	0.164441	NA	0.188	NA	7.8774634
864	22	46656246	46656246	T	G	exonic	PKDREJ	NA	nonsynonymous SNV	PKDREJ:NM_006071:exon1:c.A2974C:p.T992P	exonic	ENSG00000130943	NA	nonsynonymous SNV	ENSG00000130943:ENST00000253255:exon1:c.A2974C:p.T992P	NA	NA	22q13.31	NA	NA	NA	NA	rs7291444	0.21	0.21	0.228	0.21266	0.16	0.001	0.1297	0.5575	0.0777	0.15	NA	0.15	0.57	0.1505	0.57	0.28	T	0.044	B	0.016	B	0.786	N	1.000	P	0.55	N	1.26	T	-0.912	T	0.000	T	0.055	1.19	9.836	-1.26	-0.425	-1.782	5.654	1.189664	NA	0.15	0.145814	0.460962	NA	0.232	NA	7.8770194
864	2	219267781	219267781	C	T	exonic	CTDSP1	NA	synonymous SNV	CTDSP1:NM_001206878:exon5:c.C399T:p.H133H,CTDSP1:NM_021198:exon5:c.C402T:p.H134H,CTDSP1:NM_182642:exon5:c.C399T:p.H133H	exonic	ENSG00000144579	NA	synonymous SNV	ENSG00000144579:ENST00000273062:exon5:c.C402T:p.H134H,ENSG00000144579:ENST00000443891:exon5:c.C399T:p.H133H	Score=589;Name=lod=330	NA	2q35	NA	NA	NA	NA	rs2227255	0.51	0.51	0.447	0.465455	0.6163	0.6915	0.5764	0.0318	0.5849	0.64	0.7	0.59	0.05	0.5651	0.7	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.983	T	0.000	T	.	0.434	6.359	-2.71	-0.677	-2.503	12.043	0.434375	NA	NA	0.610233	0.135497	ID=COSM1405459;OCCURENCE=1(large_intestine)	0.413	NA	7.8750336
865	18	33750046	33750046	C	T	exonic	ELP2	NA	synonymous SNV	ELP2:NM_001242879:exon17:c.C1887T:p.C629C,ELP2:NM_001242878:exon18:c.C1887T:p.C629C,ELP2:NM_001242876:exon19:c.C2082T:p.C694C,ELP2:NM_001242877:exon19:c.C2019T:p.C673C,ELP2:NM_018255:exon20:c.C2097T:p.C699C,ELP2:NM_001242875:exon21:c.C2292T:p.C764C	exonic	ENSG00000134759	NA	nonsynonymous SNV	ENSG00000134759:ENST00000539560:exon20:c.C2045T:p.A682V	Score=445;Name=lod=86	NA	18q12.2	Score=770;Name=V$AHRARNT_02	NA	Name=3	NA	rs8299	0.35	0.35	0.349	0.323682	0.3907	0.2014	0.3948	0.3812	0.2526	0.41	0.19	0.43	0.39	0.3507	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.53559	2.53559	NA	0.384419	0.368588	ID=COSM1388592;OCCURENCE=2(large_intestine)	0.326	NA	7.874181
865	22	31741067	31741067	G	A	exonic	PATZ1	NA	synonymous SNV	PATZ1:NM_014323:exon1:c.C522T:p.L174L,PATZ1:NM_032050:exon1:c.C522T:p.L174L,PATZ1:NM_032051:exon1:c.C522T:p.L174L,PATZ1:NM_032052:exon1:c.C522T:p.L174L	exonic	ENSG00000100105	NA	synonymous SNV	ENSG00000100105:ENST00000215919:exon1:c.C522T:p.L174L,ENSG00000100105:ENST00000266269:exon1:c.C522T:p.L174L,ENSG00000100105:ENST00000351933:exon1:c.C522T:p.L174L,ENSG00000100105:ENST00000405309:exon1:c.C522T:p.L174L	Score=751;Name=lod=1508	NA	22q12.2	Score=806;Name=V$HNF4_01	NA	Name=90	NA	rs714909	0.18	0.18	0.15	0.155152	0.2763	0.121	0.2536	0.0144	0.1861	0.29	0.13	0.24	0.02	0.2406	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.6515	NA	NA	0.275698	0.054698	NA	0.152	NA	7.8740686
865	11	802379	802379	T	C	exonic	PIDD	NA	nonsynonymous SNV	PIDD:NM_145886:exon6:c.A992G:p.Q331R,PIDD:NM_145887:exon6:c.A992G:p.Q331R	exonic	ENSG00000177595	NA	nonsynonymous SNV	ENSG00000177595:ENST00000411829:exon5:c.A992G:p.Q331R,ENSG00000177595:ENST00000347755:exon6:c.A992G:p.Q331R	NA	NA	11p15.5	NA	NA	NA	NA	rs10902221	0.43	0.43	0.38	0.351637	0.494	0.2748	0.6354	0.2927	0.1626	0.51	0.32	0.61	0.3	0.4552	0.61	1	T	0.0	B	0.002	B	0.781	N	1.000	P	0	N	1.26	T	-0.956	T	0.000	T	0.219	-0.185	3.101	-3.74	-1.566	-0.263	8.803	-0.184843	NA	1	0.511287	0.316985	NA	0.355	NA	7.8728464
865	19	51918360	51918360	A	G	exonic	SIGLEC10	NA	nonsynonymous SNV	SIGLEC10:NM_001171156:exon8:c.T1159C:p.S387P,SIGLEC10:NM_033130:exon8:c.T1333C:p.S445P	exonic	ENSG00000142512	NA	nonsynonymous SNV	ENSG00000142512:ENST00000339313:exon8:c.T1333C:p.S445P,ENSG00000142512:ENST00000356298:exon8:c.T1333C:p.S445P,ENSG00000142512:ENST00000439889:exon8:c.T1159C:p.S387P	Score=278;Name=lod=18	NA	19q13.41	NA	NA	NA	NA	rs61741672	0.21	0.21	0.209	0.242212	0.1471	0.2113	0.1974	0.382	0.2147	0.14	0.18	0.18	0.36	0.1792	0.36	1	T	0.0	B	0.001	B	0.384	N	0.000	P	-2.135	N	3.22	T	-0.951	T	0.000	T	0.066	-2.126	0.005	-0.050	-0.430	0.332	6.338	-2.126313	NA	1	0.136427	0.325465	NA	0.21	NA	7.8706064
865	3	4856234	4856234	G	A	exonic	ITPR1	NA	synonymous SNV	ITPR1:NM_002222:exon54:c.G7500A:p.K2500K,ITPR1:NM_001099952:exon55:c.G7545A:p.K2515K,ITPR1:NM_001168272:exon57:c.G7644A:p.K2548K	exonic	ENSG00000150995	NA	synonymous SNV	ENSG00000150995:ENST00000544951:exon16:c.G1578A:p.K526K,ENSG00000150995:ENST00000456211:exon54:c.G7500A:p.K2500K,ENSG00000150995:ENST00000357086:exon55:c.G7545A:p.K2515K,ENSG00000150995:ENST00000423119:exon55:c.G7545A:p.K2515K,ENSG00000150995:ENST00000443694:exon55:c.G7644A:p.K2548K,ENSG00000150995:ENST00000302640:exon57:c.G7644A:p.K2548K,ENSG00000150995:ENST00000354582:exon57:c.G7644A:p.K2548K	Score=577;Name=lod=295	NA	3p26.1	NA	Name=GTF2B,TBP,NF-E2,ELF1_(SC-631),CCNT2,c-Myc,MafK_(ab50322),eGFP-FOS,Pol2,HDAC2_(SC-6296),ZNF263,eGFP-JunD,c-Fos,c-Jun,p300_(F-4),eGFP-JunB,E2F6_(H-50)	Name=52	NA	rs901854	0.61	0.61	0.586	0.58746	0.5885	0.7202	0.5346	0.5295	0.5654	0.59	0.71	0.59	0.54	0.6054	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.354973	1.354973	NA	0.60258	0.580694	NA	0.558	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117305.2;CLNDSDB=.;CLNDSDBID=.	7.8701866
865	14	94931105	94931105	A	G	exonic	SERPINA9	NA	nonsynonymous SNV	SERPINA9:NM_175739:exon4:c.T1043C:p.V348A,SERPINA9:NM_001042518:exon5:c.T743C:p.V248A	exonic	ENSG00000170054	NA	nonsynonymous SNV	ENSG00000170054:ENST00000337425:exon4:c.T1043C:p.V348A,ENSG00000170054:ENST00000380365:exon4:c.T989C:p.V330A,ENSG00000170054:ENST00000448305:exon4:c.T749C:p.V250A,ENSG00000170054:ENST00000546329:exon4:c.T935C:p.V312A,ENSG00000170054:ENST00000298845:exon5:c.T743C:p.V248A,ENSG00000170054:ENST00000424550:exon5:c.T596C:p.V199A	NA	NA	14q32.13	NA	NA	NA	NA	rs11628722	0.69	0.69	0.657	0.676118	0.8529	0.6468	0.7507	0.3759	0.8773	0.86	0.66	0.75	0.43	0.7773	0.86	0.71	T	0.001	B	0.011	B	0.009	N	1.000	P	-0.25	N	-1.74	D	-0.961	T	0.000	T	0.027	-1.474	0.018	2.06	-0.106	1.074	5.200	-1.47384	NA	0.78	0.833741	0.464072	ID=COSM1371809,COSM1371810;OCCURENCE=1(large_intestine)	0.696	NA	7.8693924
865	4	70160277	70160277	T	G	exonic	UGT2B28	NA	nonsynonymous SNV	UGT2B28:NM_053039:exon6:c.T1340G:p.I447R	exonic	ENSG00000135226	NA	nonsynonymous SNV	ENSG00000135226:ENST00000335568:exon6:c.T1340G:p.I447R	Score=343;Name=lod=33	NA	4q13.2	NA	NA	NA	NA	rs6843900	0.37	0.37	0.337	0.376997	0.4771	0.3819	0.4524	0.2678	0.363	0.47	0.35	0.4	0.21	0.4862	0.5	1	T	0.0	B	0.0	B	0.042	N	0.000	P	-1.425	N	0.22	T	-0.921	T	0.000	T	0.081	-2.862	0	2.17	0.254	0.223	7.825	-2.861548	NA	1	0.502012	0.344665	ID=COSM149685;OCCURENCE=1(stomach)	0.304	NA	7.8680214
865	19	41930396	41930396	A	G	exonic	BCKDHA	NA	synonymous SNV	BCKDHA:NM_000709:exon9:c.A1221G:p.L407L,BCKDHA:NM_001164783:exon9:c.A1218G:p.L406L	exonic	ENSG00000248098,ENSG00000255730	NA	synonymous SNV	ENSG00000248098:ENST00000269980:exon9:c.A1221G:p.L407L,ENSG00000248098:ENST00000457836:exon9:c.A1230G:p.L410L,ENSG00000248098:ENST00000595085:exon9:c.A1323G:p.L441L,ENSG00000255730:ENST00000540732:exon10:c.A1323G:p.L441L	Score=387;Name=lod=50	NA	19q13.2	NA	Name=ZNF263	Name=2	NA	rs4674	0.61	0.61	0.637	0.617013	0.5924	0.4345	0.4885	0.8548	0.6002	0.58	0.46	0.57	0.86	0.6	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.209127	NA	NA	0.608605	0.810486	NA	0.688	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000079224.3;CLNDSDB=.;CLNDSDBID=.	7.8656616
865	11	1018116	1018116	T	G	exonic	MUC6	NA	nonsynonymous SNV	MUC6:NM_005961:exon31:c.A4685C:p.N1562T	exonic	ENSG00000184956	NA	nonsynonymous SNV	ENSG00000184956:ENST00000421673:exon31:c.A4685C:p.N1562T	NA	NA	11p15.5	NA	NA	NA	NA	rs10902269	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4677	0.13	1	T	0.0	B	0.0	B	.	.	1.000	N	-1.545	N	2.46	T	-0.956	T	0.009	T	0.012	-2.106	0.006	-0.083	-0.322	2.208	4.152	-2.106408	NA	1	NA	NA	NA	0.094	NA	7.8656334
865	5	9629529	9629529	G	A	exonic	TAS2R1	NA	nonsynonymous SNV	TAS2R1:NM_019599:exon1:c.C616T:p.R206W	exonic	ENSG00000169777	NA	nonsynonymous SNV	ENSG00000169777:ENST00000382492:exon1:c.C616T:p.R206W	NA	NA	5p15.31	NA	NA	NA	NA	rs2234233	0.12	0.12	0.112	0.114217	0.1521	0.1071	0.1268	0.028	0.1902	0.15	0.13	0.13	0.03	0.1505	0.17	.	.	0.002	B	0.001	B	0.655	N	1.000	P	-0.02	N	5.47	T	-0.902	T	0.000	T	0.105	1.692	11.62	-11.3	-2.320	-0.202	2.355	1.692461	1.692461	0.06	0.165349	0.049024	ID=COSM149792;OCCURENCE=1(stomach)	0.109	NA	7.8653844
866	1	62261168	62261168	A	G	exonic	INADL	NA	nonsynonymous SNV	INADL:NM_176877:exon10:c.A1198G:p.I400V	exonic	ENSG00000132849	NA	nonsynonymous SNV	ENSG00000132849:ENST00000316485:exon10:c.A1198G:p.I400V,ENSG00000132849:ENST00000371158:exon10:c.A1198G:p.I400V	Score=569;Name=lod=273	NA	1p31.3	NA	NA	NA	NA	rs7516332	0.42	0.42	0.394	0.434904	0.493	0.4514	0.5634	0.1808	0.6104	0.48	0.41	0.57	0.25	0.4909	0.57	0.41	T	0.013	B	0.034	B	0.041	N	0.000	P	0.285	N	2.52	T	-0.970	T	0.000	T	0.041	0.854	8.454	-3.27	-0.790	0.533	4.416	0.853778	NA	0.18	0.484767	0.243759	ID=COSM1126971;OCCURENCE=1(prostate)	0.464	NA	7.8646664
866	17	7592168	7592168	C	G	exonic	WRAP53	NA	nonsynonymous SNV	WRAP53:NM_018081:exon1:c.C202G:p.R68G,WRAP53:NM_001143990:exon2:c.C202G:p.R68G,WRAP53:NM_001143991:exon2:c.C202G:p.R68G,WRAP53:NM_001143992:exon2:c.C202G:p.R68G	exonic	ENSG00000141499	NA	nonsynonymous SNV	ENSG00000141499:ENST00000316024:exon1:c.C202G:p.R68G,ENSG00000141499:ENST00000534050:exon1:c.C202G:p.R68G,ENSG00000141499:ENST00000396463:exon2:c.C202G:p.R68G,ENSG00000141499:ENST00000431639:exon2:c.C202G:p.R68G,ENSG00000141499:ENST00000457584:exon2:c.C202G:p.R68G,ENSG00000141499:ENST00000498311:exon2:c.C202G:p.R68G	NA	NA	17p13.1	Score=735;Name=V$NRSF_01	NA	NA	NA	rs2287499	0.34	0.34	0.396	0.406749	0.1421	0.2996	0.2421	0.8865	0.2577	0.14	0.26	0.2	0.84	0.2115	0.84	0.65	T	0.0	B	0.0	B	0.769	N	1.000	P	-0.805	N	0.85	T	-1.002	T	0.000	T	0.037	-0.772	0.753	1.08	-0.094	0.308	5.099	-0.77212	NA	0.29	0.116047	0.741035	NA	0.348	NA	7.8636864
866	19	56718585	56718585	A	G	intergenic	ZSCAN5B,ZSCAN5A	dist=14164;dist=14094	NA	NA	exonic	ENSG00000204532	NA	nonsynonymous SNV	ENSG00000204532:ENST00000376267:exon2:c.A542G:p.Q181R,ENSG00000204532:ENST00000534327:exon3:c.A542G:p.Q181R	NA	NA	19q13.43	NA	NA	NA	NA	rs4801690	0.57	0.57	0.552	0.606829	0.4443	0.6726	0.5058	0.7685	0.5593	0.44	0.68	0.46	0.74	0.5256	0.74	0.89	T	.	.	.	.	.	.	1.000	P	.	.	3.24	T	-0.993	T	0.000	T	0.034	-2.342	0.004	-2.68	-1.841	-2.143	3.716	-2.342288	NA	1	NA	NA	ID=COSM440413;OCCURENCE=1(breast)	0.565	NA	7.8634334
866	19	58233008	58233008	G	A	exonic	ZNF671	NA	nonsynonymous SNV	ZNF671:NM_024833:exon4:c.C446T:p.A149V	exonic	ENSG00000083814	NA	nonsynonymous SNV	ENSG00000083814:ENST00000335820:exon3:c.C152T:p.A51V,ENSG00000083814:ENST00000317398:exon4:c.C446T:p.A149V	NA	NA	19q13.43	NA	NA	NA	NA	rs3746207	0.17	0.17	0.175	0.153155	0.175	0.0873	0.111	0.2814	0.0552	0.18	0.1	0.13	0.26	0.1477	0.26	0.25	T	0.171	B	0.014	B	.	.	1.000	P	0	N	3.46	T	-0.900	T	0.000	T	0.043	1.158	9.713	-0.654	-0.229	-2.628	4.205	1.15755	NA	0.12	0.148837	0.264866	NA	0.152	NA	7.8617964
866	22	18650682	18650682	C	T	exonic	USP18	NA	nonsynonymous SNV	USP18:NM_017414:exon6:c.C506T:p.T169M	exonic	ENSG00000184979	NA	nonsynonymous SNV	ENSG00000184979:ENST00000215794:exon6:c.C506T:p.T169M	NA	NA	22q11.21	NA	NA	NA	NA	rs3180408	0.28	0.28	0.232	0.297324	0.3072	0.1637	0.2997	0.3979	0.2873	0.32	0.16	0.3	0.35	0.3202	0.41	0.11	T	0.57	P	0.165	B	0.093	N	1.000	P	1.59	L	1.48	T	-0.957	T	0.000	T	0.059	-0.311	2.52	-3.07	-0.757	-0.076	7.147	-0.311064	NA	0.24	0.344767	0.38788	ID=COSM149251;OCCURENCE=1(stomach)	0.377	NA	7.8611664
866	20	20032998	20032998	T	C	exonic	CRNKL1	NA	nonsynonymous SNV	CRNKL1:NM_016652:exon2:c.A472G:p.T158A	exonic	ENSG00000101343	NA	nonsynonymous SNV	ENSG00000101343:ENST00000377327:exon2:c.A436G:p.T146A,ENSG00000101343:ENST00000377340:exon2:c.A472G:p.T158A	NA	NA	20p11.23	NA	Name=TAF1,GABP,SP1,Pol2,HNF4A,YY1_(C-20),TR4,FOXA2_(SC-6554),ELF1_(SC-631),FOXA1_(SC-101058),HNF4G_(SC-6558),HNF4A_(H-171),FOXA1_(C-20),YY1,Pol2-4H8,ZNF263,HEY1,NFKB,TCF12,TBP	Name=148	NA	rs2255255	0.54	0.54	0.506	0.51897	0.4871	0.7024	0.549	0.4425	0.4448	0.49	0.7	0.52	0.44	0.5099	0.7	1	T	0.0	B	0.0	B	0.004	N	1.000	P	0	N	1.59	T	-0.939	T	0.000	T	0.028	-0.126	3.383	-0.469	-0.461	-0.451	2.587	-0.125925	NA	1	0.475233	0.441217	ID=COSM1565881;OCCURENCE=1(large_intestine)	0.464	NA	7.8611004
866	12	133435716	133435716	T	G	exonic	CHFR	NA	synonymous SNV	CHFR:NM_001161347:exon6:c.A609C:p.P203P,CHFR:NM_001161344:exon8:c.A885C:p.P295P,CHFR:NM_001161345:exon8:c.A885C:p.P295P,CHFR:NM_001161346:exon8:c.A849C:p.P283P,CHFR:NM_018223:exon8:c.A762C:p.P254P	exonic	ENSG00000072609	NA	synonymous SNV	ENSG00000072609:ENST00000443047:exon6:c.A609C:p.P203P,ENSG00000072609:ENST00000266880:exon8:c.A885C:p.P295P,ENSG00000072609:ENST00000315585:exon8:c.A762C:p.P254P,ENSG00000072609:ENST00000432561:exon8:c.A885C:p.P295P,ENSG00000072609:ENST00000450056:exon8:c.A849C:p.P283P	Score=481;Name=lod=120	NA	12q24.33	Score=881;Name=V$EVI1_05	Name=c-Myc	NA	NA	rs35011845	0.18	0.18	0.151	0.142173	0.2793	0.1726	0.1585	0.0106	0.136	0.29	0.18	0.16	0.02	0.2293	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.105281	NA	NA	0.298721	0.050613	NA	0.159	NA	7.8593456
866	6	30297529	30297529	T	C	exonic	TRIM39,TRIM39-RPP21	NA	synonymous SNV	TRIM39-RPP21:NM_001199119:exon1:c.T435C:p.D145D,TRIM39:NM_021253:exon3:c.T435C:p.D145D,TRIM39:NM_172016:exon3:c.T435C:p.D145D	exonic	ENSG00000204599,ENSG00000248167	NA	synonymous SNV	ENSG00000248167:ENST00000513556:exon1:c.T171C:p.D57D,ENSG00000204599:ENST00000396547:exon2:c.T435C:p.D145D,ENSG00000204599:ENST00000376656:exon3:c.T435C:p.D145D,ENSG00000204599:ENST00000376659:exon3:c.T435C:p.D145D,ENSG00000204599:ENST00000396551:exon3:c.T435C:p.D145D,ENSG00000204599:ENST00000428728:exon3:c.T435C:p.D145D,ENSG00000204599:ENST00000540416:exon3:c.T435C:p.D145D,ENSG00000204599:ENST00000396548:exon4:c.T435C:p.D145D	Score=431;Name=lod=75	NA	6p22.1	NA	NA	NA	NA	rs2057727	0.34	0.34	0.311	0.380791	0.2525	0.506	0.4539	0.3222	0.411	0.23	0.47	0.41	0.32	0.3042	0.47	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.034	T	0.043	T	.	0.992	9.049	-1.57	-0.658	-1.096	6.540	0.991596	NA	NA	0.250646	0.291446	NA	0.384	NA	7.8593206
866	20	20033242	20033242	A	T	exonic	CRNKL1	NA	synonymous SNV	CRNKL1:NM_016652:exon2:c.T228A:p.V76V	exonic	ENSG00000101343	NA	stopgain	ENSG00000101343:ENST00000496549:exon2:c.T98A:p.L33X	NA	NA	20p11.23	Score=880;Name=V$SPZ1_01	Name=CTCF,ELF1_(SC-631),Max,Mxi1_(bHLH),PU.1,SP1,Pol2,TR4,CTCFL_(SC-98982),ETS1,SREBP1,GABP,c-Myc,PAX5-C20,PAX5-N19,c-Fos,KAP1,HA-E2F1,Sin3Ak-20,FOSL2	Name=148	NA	rs2273057	0.54	0.54	0.519	0.51897	0.4871	0.7024	0.549	0.4425	0.4448	0.49	0.7	0.52	0.44	0.5114	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.165787	4.165787	NA	0.475808	0.440309	NA	0.522	NA	7.8590253
866	9	139752899	139752899	T	G	exonic	MAMDC4	NA	nonsynonymous SNV	MAMDC4:NM_206920:exon22:c.T2722G:p.W908G	exonic	ENSG00000177943	NA	nonsynonymous SNV	ENSG00000177943:ENST00000317446:exon22:c.T2722G:p.W908G,ENSG00000177943:ENST00000445819:exon24:c.T2959G:p.W987G	NA	NA	9q34.3	NA	NA	NA	NA	rs2275156	0.71	0.71	0.773	NA	NA	NA	NA	NA	NA	0.68	0.82	0.55	0.73	0.7448	0.83	0.68	T	0.734	P	0.458	P	0.112	N	0.999	P	1.95	M	4.67	T	-1.019	T	0.000	T	0.367	0.171	4.918	1.29	-0.021	0.076	3.767	0.170594	NA	0.6	0.729856	0.832954	NA	0.79	NA	7.8586774
866	19	45162189	45162189	C	A	exonic	PVR	NA	nonsynonymous SNV	PVR:NM_001135770:exon6:c.C1171A:p.R391S	exonic	ENSG00000073008	NA	nonsynonymous SNV	ENSG00000073008:ENST00000406449:exon6:c.C1171A:p.R391S	NA	NA	19q13.31	NA	NA	NA	NA	rs35385129	0.16	0.16	0.17	0.165136	0.1481	0.3393	0.0749	0.0651	0.2025	0.15	0.33	0.07	0.07	0.1688	0.33	.	.	0.065	B	0.019	B	.	.	1.000	P	.	.	-2.25	D	-1.102	T	0.000	T	0.048	-0.04	3.809	0.956	0.397	0.662	6.189	-0.040136	NA	0.14	0.160698	0.083296	NA	0.203	NA	7.8557354
866	5	79616936	79616936	A	C	exonic	SPZ1	NA	nonsynonymous SNV	SPZ1:NM_032567:exon1:c.A902C:p.H301P	exonic	ENSG00000164299	NA	nonsynonymous SNV	ENSG00000164299:ENST00000296739:exon1:c.A902C:p.H301P	NA	NA	5q14.1	NA	NA	NA	NA	rs35337118	0.1	0.1	0.081	0.0948482	0.162	NA	0.1138	0.0749	0.137	0.16	NA	0.14	0.06	0.1437	0.17	0.25	T	0.003	B	0.003	B	0.108	N	1.000	P	1.495	L	1.44	T	-1.040	T	0.000	T	0.073	2.323	13.73	-3.41	-0.560	0.033	0.641	2.323161	2.323161	0.11	0.172364	0.079265	NA	0.094	NA	7.8552694
867	4	70160309	70160309	C	G	exonic	UGT2B28	NA	nonsynonymous SNV	UGT2B28:NM_053039:exon6:c.C1372G:p.H458D	exonic	ENSG00000135226	NA	nonsynonymous SNV	ENSG00000135226:ENST00000335568:exon6:c.C1372G:p.H458D	Score=527;Name=lod=184	NA	4q13.2	NA	NA	NA	NA	rs6828191	0.4	0.4	0.362	0.376997	0.4771	0.3819	0.4524	0.2678	0.363	0.5	0.37	0.44	0.23	0.4917	0.51	1	T	0.0	B	0.0	B	0.000	N	0.000	P	-3.85	N	1.31	T	-0.903	T	0.000	T	0.051	-2.368	0.004	1.85	0.124	4.502	7.946	-2.368089	NA	1	0.509695	0.350964	NA	0.348	NA	7.8548384
867	22	43936219	43936219	C	T	exonic	EFCAB6	NA	nonsynonymous SNV	EFCAB6:NM_198856:exon26:c.G3211A:p.E1071K,EFCAB6:NM_022785:exon28:c.G3667A:p.E1223K	exonic	ENSG00000186976	NA	nonsynonymous SNV	ENSG00000186976:ENST00000396231:exon26:c.G3211A:p.E1071K,ENSG00000186976:ENST00000262726:exon28:c.G3667A:p.E1223K	NA	NA	22q13.2	NA	NA	NA	NA	rs61995890	0.12	0.12	0.104	0.0984425	0.172	0.0288	0.1066	0.0847	0.1074	0.18	0.03	0.12	0.12	0.139	0.18	0.34	T	0.037	B	0.032	B	0.026	N	0.026	P	1.375	L	-1.34	T	-1.088	T	0.001	T	0.266	1.705	11.66	2.02	0.787	0.472	5.093	1.704657	1.704657	0.18	0.167907	0.103495	NA	0.188	NA	7.8544264
867	9	94985637	94985637	T	C	exonic	IARS	NA	nonsynonymous SNV	IARS:NM_002161:exon32:c.A3544G:p.K1182E,IARS:NM_013417:exon32:c.A3544G:p.K1182E	exonic	ENSG00000196305	NA	nonsynonymous SNV	ENSG00000196305:ENST00000447699:exon31:c.A3214G:p.K1072E,ENSG00000196305:ENST00000375643:exon32:c.A3544G:p.K1182E,ENSG00000196305:ENST00000443024:exon32:c.A3544G:p.K1182E	NA	NA	9q22.31	NA	NA	NA	NA	rs556155	0.12	0.12	0.118	0.160543	0.1461	0.121	0.1988	0.0537	0.3333	0.15	0.12	0.17	0.05	0.1727	0.17	0.88	T	0.0	B	0.002	B	0.112	N	1.000	P	-0.49	N	0.94	T	-1.019	T	0.000	T	0.272	-0.274	2.687	2.58	0.499	0.383	6.598	-0.274075	NA	0.81	0.161744	0.072855	NA	0.123	NA	7.8527894
867	11	7818313	7818313	C	T	exonic	OR5P2	NA	synonymous SNV	OR5P2:NM_153444:exon1:c.G177A:p.L59L	exonic	ENSG00000183303	NA	synonymous SNV	ENSG00000183303:ENST00000329434:exon1:c.G177A:p.L59L	Score=325;Name=lod=28	NA	11p15.4	Score=838;Name=V$MAX_01	Name=MafK_(ab50322),MafF_(M8194),MafK_(SC-477)	NA	NA	rs73406609	0.27	0.27	0.259	0.236621	0.2763	0.128	0.2911	0.348	0.1186	0.29	0.15	0.28	0.37	0.2571	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.140367	NA	NA	0.282036	0.324369	NA	0.246	NA	7.8512306
867	10	96827178	96827178	T	C	intronic	CYP2C8	NA	NA	NA	exonic	ENSG00000138115	NA	nonsynonymous SNV	ENSG00000138115:ENST00000539050:exon2:c.A10G:p.K4E	NA	NA	10q23.33	NA	NA	NA	NA	rs2275622	0.67	0.67	0.685	0.646366	0.6839	0.4534	0.4856	0.8321	0.6697	0.68	0.52	0.6	0.85	0.6316	0.85	1	T	0.0	B	0.0	B	.	.	1.000	P	.	.	-0.65	T	-0.952	T	0.000	T	0.037	-2.491	0.003	-6.97	-5.673	-4.072	0.112	-2.490695	NA	NA	NA	NA	NA	0.623	NA	7.8511667
867	13	23909162	23909162	A	G	exonic	SACS	NA	synonymous SNV	SACS:NM_014363:exon10:c.T8853C:p.V2951V	exonic	ENSG00000151835	NA	synonymous SNV	ENSG00000151835:ENST00000402364:exon8:c.T6603C:p.V2201V,ENSG00000151835:ENST00000382292:exon9:c.T8853C:p.V2951V,ENSG00000151835:ENST00000382298:exon10:c.T8853C:p.V2951V	Score=494;Name=lod=136	NA	13q12.12	Score=729;Name=V$SEF1_C	NA	NA	NA	rs9552929	0.27	0.27	0.228	0.259185	0.2783	0.3145	0.3617	0.056	0.3845	0.28	0.36	0.36	0.07	0.278	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.134361	NA	NA	0.26	0.096913	NA	0.152	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118234.2;CLNDSDB=.;CLNDSDBID=.	7.8503666
867	13	23911820	23911820	A	G	exonic	SACS	NA	synonymous SNV	SACS:NM_014363:exon10:c.T6195C:p.I2065I	exonic	ENSG00000151835	NA	synonymous SNV	ENSG00000151835:ENST00000402364:exon8:c.T3945C:p.I1315I,ENSG00000151835:ENST00000382292:exon9:c.T6195C:p.I2065I,ENSG00000151835:ENST00000382298:exon10:c.T6195C:p.I2065I	Score=628;Name=lod=476	NA	13q12.12	Score=846;Name=V$OCT1_02	NA	NA	NA	rs4143768	0.27	0.27	0.222	0.259984	0.2783	0.3155	0.3617	0.056	0.3875	0.28	0.37	0.36	0.07	0.2809	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.416524	NA	NA	0.258789	0.095638	NA	0.159	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118232.2;CLNDSDB=.;CLNDSDBID=.	7.8486776
867	6	30680916	30680916	C	T	exonic	MDC1	NA	nonsynonymous SNV	MDC1:NM_014641:exon5:c.G803A:p.R268K	exonic	ENSG00000137337	NA	nonsynonymous SNV	ENSG00000137337:ENST00000376405:exon5:c.G803A:p.R268K,ENSG00000137337:ENST00000376406:exon5:c.G803A:p.R268K	NA	NA	6p21.33	NA	NA	NA	NA	rs9262152	0.11	0.11	0.093	0.106629	0.1789	0.0556	0.1412	0.0091	0.1922	0.18	0.07	0.13	0.02	0.1479	0.18	0.86	T	0.046	B	0.019	B	0.500	N	1.000	P	0.57	N	4.37	T	-0.935	T	0.001	T	0.057	-0.554	1.495	-2.14	-0.391	-0.735	1.246	-0.553583	NA	0	0.158176	0.031767	NA	0.094	NA	7.8483574
867	7	18767343	18767343	A	G	exonic	HDAC9	NA	synonymous SNV	HDAC9:NM_058176:exon12:c.A1863G:p.P621P,HDAC9:NM_178425:exon12:c.A1872G:p.P624P,HDAC9:NM_178423:exon13:c.A1863G:p.P621P	exonic	ENSG00000048052	NA	synonymous SNV	ENSG00000048052:ENST00000401921:exon11:c.A1740G:p.P580P,ENSG00000048052:ENST00000432645:exon12:c.A1863G:p.P621P,ENSG00000048052:ENST00000441542:exon12:c.A1872G:p.P624P,ENSG00000048052:ENST00000406451:exon13:c.A1863G:p.P621P	Score=374;Name=lod=44	NA	7p21.1	Score=861;Name=V$CREB_02	NA	Name=6	NA	rs1178127	0.33	0.33	0.291	0.329872	0.2565	0.5159	0.2997	0.2133	0.3926	0.26	0.53	0.27	0.24	0.3117	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.043402	NA	NA	0.250783	0.202309	NA	0.297	NA	7.8476836
867	9	125315557	125315557	T	C	exonic	OR1N2	NA	nonsynonymous SNV	OR1N2:NM_001004457:exon1:c.T109C:p.W37R	exonic	ENSG00000171501	NA	nonsynonymous SNV	ENSG00000171501:ENST00000373688:exon1:c.T109C:p.W37R	NA	NA	9q33.2	NA	NA	NA	NA	rs1831370	0.55	0.55	0.516	0.558506	0.4791	0.6637	0.5908	0.5946	0.4601	0.47	0.62	0.58	0.57	0.5173	0.62	0.3	T	0.0	B	0.0	B	0.590	N	1.000	P	-0.48	N	5.39	T	-1.075	T	0.000	T	0.012	-0.653	1.129	-2.62	-0.761	-5.227	0.670	-0.653039	NA	0.43	0.489767	0.573763	ID=COSM150700;OCCURENCE=1(stomach)	0.428	NA	7.8471664
867	3	27332177	27332177	T	C	exonic	NEK10	NA	synonymous SNV	NEK10:NM_199347:exon20:c.A1674G:p.G558G	exonic	ENSG00000163491	NA	synonymous SNV	ENSG00000163491:ENST00000341435:exon20:c.A1674G:p.G558G,ENSG00000163491:ENST00000429845:exon20:c.A1674G:p.G558G	Score=629;Name=lod=480	NA	3p24.1	Score=915;Name=V$EVI1_04	NA	NA	NA	rs674303	0.36	0.36	0.373	0.389776	0.2634	0.1776	0.2608	0.8502	0.2076	0.25	0.14	0.27	0.83	0.2851	0.83	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.042	T	0.000	T	.	1.209	9.91	1.59	0.090	0.201	2.159	1.209279	NA	NA	0.272613	0.728316	NA	0.449	NA	7.8455536
867	1	24658063	24658063	C	G	exonic	GRHL3	NA	nonsynonymous SNV	GRHL3:NM_001195010:exon2:c.C27G:p.D9E,GRHL3:NM_021180:exon2:c.C180G:p.D60E,GRHL3:NM_198173:exon2:c.C165G:p.D55E,GRHL3:NM_198174:exon2:c.C165G:p.D55E	exonic	ENSG00000158055	NA	nonsynonymous SNV	ENSG00000158055:ENST00000236255:exon2:c.C180G:p.D60E,ENSG00000158055:ENST00000350501:exon2:c.C165G:p.D55E,ENSG00000158055:ENST00000356046:exon2:c.C27G:p.D9E,ENSG00000158055:ENST00000361548:exon2:c.C165G:p.D55E,ENSG00000158055:ENST00000524724:exon2:c.C27G:p.D9E	Score=391;Name=lod=52	NA	1p36.11	NA	NA	NA	NA	rs2486668	0.17	0.17	0.172	0.178514	0.164	0.1944	0.1311	0.2277	0.1442	0.17	0.18	0.15	0.2	0.1597	0.21	0.17	T	0.003	B	0.011	B	0.000	N	0.000	P	1.485	L	0.67	T	-1.081	T	0.000	T	0.121	3.004	16.02	0.337	0.353	0.647	2.934	3.004367	3.004367	0.08	0.164419	0.206764	ID=COSM146450;OCCURENCE=1(stomach)	0.203	NA	7.8452144
867	8	144654594	144654594	G	T	exonic	MROH6	NA	nonsynonymous SNV	MROH6:NM_001100878:exon1:c.C291A:p.H97Q	exonic	ENSG00000204839	NA	nonsynonymous SNV	ENSG00000204839:ENST00000398882:exon1:c.C291A:p.H97Q,ENSG00000204839:ENST00000529971:exon1:c.C291A:p.H97Q	NA	NA	8q24.3	NA	NA	Name=5	NA	rs4873803	0.37	0.37	0.296	0.316893	0.5219	0.3552	0.4107	0.1021	0.2904	0.53	0.32	0.49	0.12	0.4499	0.53	0.32	T	0.003	B	0.003	B	.	.	0.995	P	0	N	4.15	T	-0.910	T	0.000	T	0.137	2.391	13.95	-3.9	-0.596	-0.255	3.009	2.390863	2.390863	0.92	0.516389	0.165607	NA	0.304	NA	7.8451444
868	6	51890823	51890823	G	A	exonic	PKHD1	NA	nonsynonymous SNV	PKHD1:NM_138694:exon32:c.C3785T:p.A1262V,PKHD1:NM_170724:exon32:c.C3785T:p.A1262V	exonic	ENSG00000170927	NA	nonsynonymous SNV	ENSG00000170927:ENST00000340994:exon32:c.C3785T:p.A1262V,ENSG00000170927:ENST00000371117:exon32:c.C3785T:p.A1262V	NA	NA	6p12.2	NA	NA	NA	NA	rs9296669	0.4	0.4	0.342	0.354633	0.502	0.381	0.5879	0.1051	0.3476	0.51	0.37	0.58	0.12	0.4698	0.58	0.42	T	0.0	B	0.001	B	0.035	N	1.000	P	-1.245	N	-2.01	D	-0.956	T	0.090	T	0.019	1.32	10.33	-1.36	-0.700	0.265	0.749	1.320491	1.320491	1	0.516628	0.149796	NA	0.478	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000082549.1;CLNDSDB=.;CLNDSDBID=.	7.8449054
868	14	75746690	75746690	C	T	exonic	FOS	NA	synonymous SNV	FOS:NM_005252:exon2:c.C252T:p.S84S	exonic	ENSG00000170345	NA	nonsynonymous SNV	ENSG00000170345:ENST00000557139:exon1:c.C10T:p.R4C,ENSG00000170345:ENST00000554212:exon2:c.C223T:p.R75C	NA	NA	14q24.3	NA	Name=Pol2-4H8,TAF7_(SQ-8),Pol2	Name=85	NA	rs1046117	0.71	0.71	0.702	0.702476	0.7237	0.5665	0.647	0.9191	0.5675	0.73	0.56	0.65	0.91	0.7054	0.91	.	.	.	.	.	.	.	.	0.000	P	.	.	-1.36	T	-1.008	T	0.000	T	.	2.026	12.73	-1.11	-0.320	-1.756	4.167	2.025885	2.025885	NA	0.727674	0.883795	NA	0.761	NA	7.843226
868	19	44418824	44418824	C	T	exonic	ZNF45	NA	nonsynonymous SNV	ZNF45:NM_003425:exon10:c.G764A:p.R255K	exonic	ENSG00000124459	NA	nonsynonymous SNV	ENSG00000124459:ENST00000589703:exon4:c.G764A:p.R255K,ENSG00000124459:ENST00000269973:exon10:c.G764A:p.R255K	Score=325;Name=lod=28	NA	19q13.31	NA	Name=SETDB1	NA	NA	rs399098	0.47	0.47	0.418	0.414337	0.5119	0.5486	0.5764	0.174	0.3855	0.51	0.57	0.51	0.25	0.479	0.57	1	T	0.0	B	0.0	B	0.023	N	0.969	P	-0.06	N	3.01	T	-0.936	T	0.000	T	0.047	0.338	5.834	0.479	0.402	-0.022	5.566	0.338167	NA	1	0.500698	0.225601	ID=COSM1178459;OCCURENCE=1(prostate)	0.413	NA	7.8417354
868	21	47786524	47786524	A	G	exonic	PCNT	NA	nonsynonymous SNV	PCNT:NM_006031:exon15:c.A2635G:p.T879A	exonic	ENSG00000160299	NA	nonsynonymous SNV	ENSG00000160299:ENST00000359568:exon15:c.A2635G:p.T879A	NA	NA	21q22.3	NA	NA	NA	NA	rs2839227	0.27	0.27	0.287	0.316693	0.1521	0.2014	0.2464	0.5787	0.3006	0.15	0.21	0.2	0.56	0.205	0.56	0.45	T	0.264	B	0.019	B	0.880	N	1.000	P	1.7	L	4.77	T	-1.054	T	0.000	T	0.089	0.706	7.766	1.81	0.438	2.418	4.146	0.706433	NA	0.16	0.136194	0.501139	NA	0.304	NA	7.8400394
868	2	112754943	112754943	C	T	exonic	MERTK	NA	synonymous SNV	MERTK:NM_006343:exon10:c.C1494T:p.N498N	exonic	ENSG00000153208	NA	synonymous SNV	ENSG00000153208:ENST00000409780:exon9:c.C966T:p.N322N,ENSG00000153208:ENST00000295408:exon10:c.C1494T:p.N498N,ENSG00000153208:ENST00000421804:exon10:c.C1494T:p.N498N	NA	NA	2q13	Score=867;Name=V$RFX1_01	NA	NA	NA	rs3811634	0.18	0.18	0.184	0.190495	0.2873	0.1696	0.1888	0.1036	0.2311	0.25	0.12	0.22	0.09	0.2385	0.3	0.01	D	.	.	.	.	.	.	1.000	P	.	.	.	.	-1.042	T	0.000	T	.	0.511	6.769	1.35	0.254	-0.329	9.338	0.510703	NA	0.01	0.301279	0.148888	ID=COSM1398800;OCCURENCE=1(large_intestine)	0.21	NA	7.8395876
868	11	56468416	56468416	G	A	exonic	OR9G1,OR9G9	NA	nonsynonymous SNV	OR9G1:NM_001005213:exon1:c.G553A:p.E185K,OR9G9:NM_001013358:exon1:c.G553A:p.E185K	exonic	ENSG00000174914	NA	nonsynonymous SNV	ENSG00000174914:ENST00000312153:exon1:c.G553A:p.E185K	NA	NA	11q12.1	NA	NA	NA	NA	rs11228735	0.49	0.49	NA	NA	NA	NA	NA	NA	NA	0.49	0.48	0.5	0.5	0.494	0.5	0.64	T	0.0	B	0.001	B	0.034	N	1.000	N	-1.7	N	9.06	T	-0.889	T	0.000	T	0.107	-1.239	0.055	2.14	0.329	0.503	1.207	-1.238785	NA	1	NA	NA	NA	0.232	NA	7.8393334
868	5	134782576	134782576	T	G	exonic	C5orf20	NA	nonsynonymous SNV	C5orf20:NM_130848:exon1:c.A223C:p.T75P	exonic	ENSG00000251380	NA	nonsynonymous SNV	ENSG00000251380:ENST00000503143:exon1:c.A223C:p.T75P	NA	NA	5q31.1	NA	NA	NA	NA	rs1031844	0.61	0.61	0.634	0.645367	0.5159	0.5635	0.5533	0.9319	0.5409	0.5	0.55	0.51	0.92	0.5178	0.92	0	D	0.0	B	0.0	B	.	.	1.000	P	0	N	1.17	T	-1.054	T	0.000	T	0.057	0.325	5.763	2.27	0.366	-0.268	3.820	0.325211	NA	NA	0.460698	0.859964	NA	0.761	NA	7.8389354
868	8	124664167	124664167	T	C	exonic	KLHL38	NA	nonsynonymous SNV	KLHL38:NM_001081675:exon1:c.A1000G:p.I334V	exonic	ENSG00000175946	NA	nonsynonymous SNV	ENSG00000175946:ENST00000325995:exon1:c.A1000G:p.I334V	NA	NA	8q24.13	NA	NA	NA	NA	rs11784192	0.75	0.75	0.766	0.726238	0.8579	0.7113	0.7118	0.6641	0.7004	0.86	0.7	0.73	0.65	0.7908	0.86	0.97	T	0.0	B	0.007	B	0.086	N	1.000	P	0.735	N	-0.32	T	-0.933	T	0.000	T	0.03	-2.19	0.005	-2.96	-1.421	-1.023	14.820	-2.190054	NA	1	0.847056	0.71875	NA	0.826	NA	7.8375774
868	5	147477551	147477551	C	T	exonic	SPINK5	NA	nonsynonymous SNV	SPINK5:NM_001127698:exon11:c.C1004T:p.A335V,SPINK5:NM_001127699:exon11:c.C1004T:p.A335V,SPINK5:NM_006846:exon11:c.C1004T:p.A335V	exonic	ENSG00000133710	NA	nonsynonymous SNV	ENSG00000133710:ENST00000256084:exon11:c.C1004T:p.A335V,ENSG00000133710:ENST00000359874:exon11:c.C1004T:p.A335V,ENSG00000133710:ENST00000398454:exon11:c.C1004T:p.A335V,ENSG00000133710:ENST00000508733:exon11:c.C947T:p.A316V	Score=503;Name=lod=148	NA	5q32	NA	NA	NA	NA	rs34482796	0.44	0.44	0.394	0.446486	0.4831	0.4802	0.6282	0.2534	0.5061	0.46	0.46	0.6	0.28	0.507	0.6	0.24	T	0.017	B	0.046	B	0.031	N	0.964	P	1.63	L	3.51	T	-1.019	T	0.000	T	0.36	1.408	10.64	2.65	0.095	0.065	7.800	1.408263	1.408263	0.32	0.50597	0.297581	NA	0.377	NA	7.8372634
868	5	134782510	134782510	T	C	exonic	C5orf20	NA	nonsynonymous SNV	C5orf20:NM_130848:exon1:c.A289G:p.N97D	exonic	ENSG00000251380	NA	nonsynonymous SNV	ENSG00000251380:ENST00000503143:exon1:c.A289G:p.N97D	NA	NA	5q31.1	NA	NA	NA	NA	rs12520809	0.61	0.61	0.617	0.645168	0.5149	0.5645	0.5533	0.9312	0.5409	0.5	0.55	0.51	0.92	0.518	0.92	0	D	0.0	B	0.0	B	.	.	1.000	P	0	N	1.24	T	-1.037	T	0.000	T	0.013	-0.049	3.765	-1.38	-0.932	-1.320	6.732	-0.048825	NA	NA	0.463605	0.86246	NA	0.761	NA	7.8368284
868	6	29910358	29910358	C	G	exonic	HLA-A	NA	nonsynonymous SNV	HLA-A:NM_001242758:exon1:c.C28G:p.L10V,HLA-A:NM_002116:exon1:c.C28G:p.L10V	exonic	ENSG00000206503	NA	nonsynonymous SNV	ENSG00000206503:ENST00000376802:exon1:c.C28G:p.L10V,ENSG00000206503:ENST00000376806:exon1:c.C28G:p.L10V,ENSG00000206503:ENST00000376809:exon1:c.C28G:p.L10V,ENSG00000206503:ENST00000396634:exon3:c.C28G:p.L10V	NA	NA	6p22.1	NA	Name=TBP,GTF2F1_(RAP-74),HEY1,HNF4G_(SC-6558),Oct-2,RFX5_(N-494),SP1,Pol2,Pol2(phosphoS2),YY1,TAF7_(SQ-8),YY1_(C-20),Sin3Ak-20,Pol2-4H8,TAF1,POU2F2	Name=144	NA	rs1143146	0.52	0.52	0.463	0.505391	0.5119	0.5397	0.5965	0.4743	0.4407	0.51	0.58	0.55	0.47	0.5044	0.58	1	T	0.0	B	0.003	B	0.829	N	1.000	P	.	.	5.71	T	-0.984	T	0.000	T	0.247	0.853	8.451	-0.398	-0.192	-0.182	4.198	0.853152	NA	0.41	0.481024	0.475261	NA	0.384	NA	7.8360094
868	1	248202344	248202344	G	C	exonic	OR2L2	NA	nonsynonymous SNV	OR2L2:NM_001004686:exon1:c.G775C:p.V259L	exonic	ENSG00000203663	NA	nonsynonymous SNV	ENSG00000203663:ENST00000366479:exon1:c.G775C:p.V259L	NA	NA	1q44	NA	NA	NA	NA	rs6658141	0.34	0.34	0.367	0.345048	0.1551	0.3036	0.1484	0.7799	0.135	0.15	0.35	0.16	0.77	0.1973	0.77	0.63	T	0.0	B	0.001	B	0.027	N	1.000	P	.	.	1.4	T	-0.989	T	0.000	T	0.053	-1.082	0.161	1.9	0.046	-3.472	3.346	-1.081535	NA	1	0.145233	0.682025	NA	0.312	NA	7.8357004
869	7	100551793	100551793	G	T	intergenic	ACHE,MUC12	dist=58252;dist=61111	NA	NA	exonic	ENSG00000169894	NA	nonsynonymous SNV	ENSG00000169894:ENST00000319509:exon1:c.G544T:p.V182F	NA	NA	7q22.1	NA	NA	NA	NA	rs73398735	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4991	0.46	0.71	T	0.531	P	0.022	B	.	.	0.711	N	0	N	3.26	T	-0.932	T	0.007	T	0.128	-1.521	0.016	-2.65	-1.240	-0.567	3.729	-1.521246	NA	0.44	NA	NA	NA	0.471	NA	7.8342334
869	17	39383073	39383073	G	C	exonic	KRTAP9-2	NA	nonsynonymous SNV	KRTAP9-2:NM_031961:exon1:c.G167C:p.C56S	exonic	ENSG00000239886	NA	nonsynonymous SNV	ENSG00000239886:ENST00000377721:exon1:c.G167C:p.C56S,ENSG00000239886:ENST00000455970:exon1:c.G167C:p.C56S	Score=278;Name=lod=18	NA	17q21.2	NA	NA	NA	NA	rs9902235	0.7	0.7	0.633	0.709065	0.7455	0.6319	0.8329	0.6044	0.8047	0.74	0.64	0.82	0.61	0.7536	0.82	0.12	T	0.124	B	0.062	B	.	.	0.609	P	2.42	M	4.46	T	-1.073	T	0.000	T	0.308	1.353	10.45	1.92	0.793	0.915	4.965	1.352814	1.352814	0	NA	NA	NA	0.696	NA	7.8342334
869	1	144871755	144871755	A	T	exonic	PDE4DIP	NA	nonsynonymous SNV	PDE4DIP:NM_001198834:exon32:c.T5207A:p.V1736E,PDE4DIP:NM_014644:exon32:c.T5207A:p.V1736E	exonic	ENSG00000178104	NA	nonsynonymous SNV	ENSG00000178104:ENST00000369354:exon32:c.T5207A:p.V1736E,ENSG00000178104:ENST00000369356:exon32:c.T5207A:p.V1736E,ENSG00000178104:ENST00000530740:exon34:c.T5462A:p.V1821E,ENSG00000178104:ENST00000369359:exon35:c.T5615A:p.V1872E	NA	NA	1q21.1	NA	Name=PU.1	NA	NA	rs1778159	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	0.47	0.32	T	0.361	B	0.069	B	.	.	1.000	N	1.59	L	4.81	T	-0.931	T	0.002	T	0.271	2.221	13.38	0.597	0.127	0.238	7.646	2.221371	2.221371	0.14	NA	NA	NA	0.449	NA	7.8333334
869	17	2318550	2318550	G	C	ncRNA_exonic	LOC284009	NA	NA	NA	ncRNA_exonic	ENSG00000205821	NA	NA	NA	NA	NA	17p13.3	NA	NA	NA	NA	rs4613098	0.39	0.39	0.399	0.461661	0.2565	0.3056	0.2594	0.7398	0.6012	0.26	0.35	0.28	0.72	0.3349	0.72	0	D	0.0	B	0.0	B	.	.	.	.	.	.	.	.	-0.957	T	0.000	T	.	-0.245	2.818	-3.33	-0.755	-1.065	5.425	-0.245391	NA	NA	0.242271	0.651561	NA	0.348	NA	7.8329956
869	10	46999151	46999151	T	C	exonic	GPRIN2	NA	nonsynonymous SNV	GPRIN2:NM_014696:exon3:c.T271C:p.W91R	exonic	ENSG00000204175	NA	nonsynonymous SNV	ENSG00000204175:ENST00000374314:exon1:c.T271C:p.W91R,ENSG00000204175:ENST00000374317:exon3:c.T271C:p.W91R	Score=343;Name=lod=33	NA	10q11.22	NA	NA	NA	NA	rs3127820	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5017	0.48	1	T	0.0	B	0.0	B	0.016	N	1.000	N	-2.015	N	4.16	T	-0.916	T	0.002	T	0.143	-0.623	1.236	1.98	0.330	-0.664	6.647	-0.622628	NA	1	NA	NA	NA	0.493	NA	7.8316334
869	12	8329652	8329652	A	G	exonic	ZNF705A	NA	nonsynonymous SNV	ZNF705A:NM_001004328:exon5:c.A376G:p.T126A	exonic	ENSG00000196946	NA	nonsynonymous SNV	ENSG00000196946:ENST00000359286:exon5:c.A376G:p.T126A,ENSG00000196946:ENST00000396570:exon6:c.A376G:p.T126A	NA	NA	12p13.31	NA	NA	NA	NA	rs10743251	0.48	0.48	0.423	NA	NA	NA	NA	NA	NA	0.52	0.48	0.46	0.42	0.5021	0.52	0.3	T	0.225	B	0.02	B	.	.	1.000	P	0.61	N	3.21	T	-0.963	T	0.000	T	0.053	0.649	7.485	1.35	0.891	2.005	4.263	0.64944	NA	0.1	NA	NA	ID=COSM147414;OCCURENCE=1(stomach)	NA	NA	7.8312334
869	10	46998999	46998999	G	A	exonic	GPRIN2	NA	nonsynonymous SNV	GPRIN2:NM_014696:exon3:c.G119A:p.R40H	exonic	ENSG00000204175	NA	nonsynonymous SNV	ENSG00000204175:ENST00000374314:exon1:c.G119A:p.R40H,ENSG00000204175:ENST00000374317:exon3:c.G119A:p.R40H	Score=399;Name=lod=56	NA	10q11.22	NA	NA	NA	NA	rs3127818	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5028	0.5	0.12	T	0.116	B	0.025	B	0.046	N	0.970	N	1.155	L	3.18	T	-0.873	T	0.000	T	0.082	1.411	10.65	0.466	-0.022	0.187	5.824	1.410753	1.410753	0.15	NA	NA	ID=COSM1560780;OCCURENCE=1(large_intestine)	0.5	NA	7.8305334
869	6	38980081	38980081	A	G	exonic	DNAH8	NA	nonsynonymous SNV	DNAH8:NM_001206927:exon90:c.A13462G:p.I4488V	exonic	ENSG00000124721	NA	nonsynonymous SNV	ENSG00000124721:ENST00000441566:exon85:c.A12703G:p.I4235V,ENSG00000124721:ENST00000359357:exon88:c.A12811G:p.I4271V,ENSG00000124721:ENST00000327475:exon89:c.A13426G:p.I4476V	NA	NA	6p21.2	NA	NA	NA	NA	rs10484847	0.11	0.11	0.096	0.10643	0.1769	0.002	0.1225	0.1188	0.1135	0.17	0.0035	0.14	0.12	0.1458	0.18	0.31	T	0.0	B	0.001	B	0.114	N	1.000	P	-0.51	N	3.13	T	-0.906	T	0.003	T	0.074	0.743	7.94	2.45	0.187	0.402	1.940	0.742626	NA	0.65	0.180116	0.14571	NA	0.109	NA	7.8305174
869	7	21628197	21628197	A	G	exonic	DNAH11	NA	nonsynonymous SNV	DNAH11:NM_001277115:exon11:c.A1916G:p.Q639R	exonic	ENSG00000105877	NA	nonsynonymous SNV	ENSG00000105877:ENST00000328843:exon11:c.A1916G:p.Q639R,ENSG00000105877:ENST00000409508:exon11:c.A1916G:p.Q639R	NA	NA	7p15.3	NA	NA	NA	NA	rs12670130	0.17	0.17	0.151	0.144968	0.1849	0.1865	0.111	0.1225	0.1155	0.17	0.22	0.13	0.13	0.149	0.22	1	T	0.0	B	0.001	B	0.352	N	1.000	P	.	.	0.75	T	-1.009	T	0.000	T	0.053	-1.386	0.024	0.131	-0.123	2.237	9.802	-1.385524	NA	0.55	0.169423	0.12567	NA	0.232	NA	7.8300104
869	3	9970088	9970088	C	T	exonic	IL17RC	NA	nonsynonymous SNV	IL17RC:NM_001203265:exon10:c.C932T:p.A311V,IL17RC:NM_032732:exon10:c.C932T:p.A311V,IL17RC:NM_001203263:exon11:c.C977T:p.A326V,IL17RC:NM_001203264:exon11:c.C977T:p.A326V,IL17RC:NM_153460:exon11:c.C977T:p.A326V,IL17RC:NM_153461:exon11:c.C1190T:p.A397V	exonic	ENSG00000163702	NA	nonsynonymous SNV	ENSG00000163702:ENST00000416074:exon9:c.C545T:p.A182V,ENSG00000163702:ENST00000438091:exon9:c.C857T:p.A286V,ENSG00000163702:ENST00000383812:exon10:c.C932T:p.A311V,ENSG00000163702:ENST00000436503:exon10:c.C902T:p.A301V,ENSG00000163702:ENST00000455057:exon10:c.C932T:p.A311V,ENSG00000163702:ENST00000295981:exon11:c.C1190T:p.A397V,ENSG00000163702:ENST00000403601:exon11:c.C977T:p.A326V,ENSG00000163702:ENST00000413608:exon11:c.C977T:p.A326V	NA	NA	3p25.3	NA	NA	NA	NA	rs11719981	NA	NA	NA	0.000798722	NA	0.001	0.0014	NA	0.002	NA	NA	NA	NA	0.0017	0.0017	0.79	T	0.462	P	0.023	B	0.617	N	1.000	N	0.035	N	2.49	T	-0.978	T	0.011	T	0.282	-0.631	1.205	-0.082	0.140	0.280	3.667	-0.631326	NA	0.51	0.001746	0.000909	NA	NA	NA	7.8298874
869	19	1004710	1004710	C	T	exonic	GRIN3B	NA	nonsynonymous SNV	GRIN3B:NM_138690:exon3:c.C1210T:p.R404W	exonic	ENSG00000116032	NA	nonsynonymous SNV	ENSG00000116032:ENST00000234389:exon3:c.C1210T:p.R404W	NA	NA	19p13.3	NA	NA	NA	NA	rs4807399	0.35	0.35	0.369	0.361621	0.5199	0.0933	0.3573	0.3956	0.4325	0.52	0.07	0.42	0.36	0.466	0.52	0.18	T	0.033	B	0.003	B	0.003	N	1.000	P	1.095	L	2.72	T	-0.902	T	0.000	T	0.073	-0.656	1.117	-3.29	-0.291	-1.671	1.740	-0.6564	NA	0.19	0.520173	0.398085	NA	0.399	NA	7.8272604
869	2	131414176	131414176	C	T	exonic	POTEJ	NA	nonsynonymous SNV	POTEJ:NM_001277083:exon15:c.C1843T:p.R615W	exonic	ENSG00000222038	NA	nonsynonymous SNV	ENSG00000222038:ENST00000409602:exon15:c.C1843T:p.R615W	NA	NA	2q21.1	NA	NA	NA	NA	rs62165276	NA	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5065	0.033	0	D	.	.	.	.	.	.	1.000	P	1.15	L	2.41	T	-1.006	T	0.043	T	0.263	0.484	6.627	0.993	0.847	-0.120	7.879	0.484097	NA	0	NA	NA	NA	0.022	NA	7.8268334
869	21	34924243	34924243	T	C	exonic	SON	NA	synonymous SNV	SON:NM_032195:exon3:c.T2706C:p.D902D,SON:NM_138927:exon3:c.T2706C:p.D902D	exonic	ENSG00000159140	NA	synonymous SNV	ENSG00000159140:ENST00000290239:exon3:c.T2706C:p.D902D,ENSG00000159140:ENST00000300278:exon3:c.T2706C:p.D902D,ENSG00000159140:ENST00000356577:exon3:c.T2706C:p.D902D,ENSG00000159140:ENST00000381679:exon3:c.T2706C:p.D902D,ENSG00000159140:ENST00000455528:exon3:c.T2706C:p.D902D	Score=628;Name=lod=477	NA	21q22.11	NA	Name=Pol2-4H8	Name=3	NA	rs16990760	0.2	0.2	0.186	0.180312	0.3101	0.1657	0.2435	0.0318	0.2178	0.3	0.15	0.27	0.05	0.2488	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.431374	NA	NA	0.281744	0.075579	ID=COSM1179794,COSM1179795;OCCURENCE=1(prostate)	0.08	NA	7.8260226
869	8	17928811	17928811	C	T	exonic	ASAH1	NA	nonsynonymous SNV	ASAH1:NM_004315:exon3:c.G262A:p.V88M,ASAH1:NM_177924:exon3:c.G214A:p.V72M,ASAH1:NM_001127505:exon4:c.G283A:p.V95M	exonic	ENSG00000104763	NA	nonsynonymous SNV	ENSG00000104763:ENST00000262097:exon3:c.G214A:p.V72M,ENSG00000104763:ENST00000381733:exon3:c.G262A:p.V88M,ENSG00000104763:ENST00000417108:exon3:c.G19A:p.V7M,ENSG00000104763:ENST00000520781:exon3:c.G214A:p.V72M,ENSG00000104763:ENST00000314146:exon4:c.G283A:p.V95M	NA	NA	8p22	NA	NA	NA	NA	rs1071645	0.42	0.42	0.379	0.420527	0.4761	0.373	0.5735	0.2504	0.5337	0.47	0.36	0.6	0.3	0.5386	0.6	0.21	T	0.001	B	0.004	B	0.247	N	1.000	P	-0.69	N	0.79	T	-0.950	T	0.000	T	0.049	0.941	8.835	-3.27	-1.107	0.402	6.940	0.940822	NA	0.12	0.493372	0.289378	NA	0.348	NA	7.8252614
870	10	134218296	134218296	C	G	exonic	PWWP2B	NA	nonsynonymous SNV	PWWP2B:NM_001098637:exon2:c.C292G:p.R98G,PWWP2B:NM_138499:exon2:c.C292G:p.R98G	exonic	ENSG00000171813	NA	nonsynonymous SNV	ENSG00000171813:ENST00000305233:exon2:c.C292G:p.R98G,ENSG00000171813:ENST00000368609:exon2:c.C292G:p.R98G	NA	NA	10q26.3	NA	NA	NA	NA	rs10747057	0.57	0.57	0.605	0.592452	0.4563	0.6954	0.5461	0.7065	0.5051	0.44	0.69	0.49	0.68	0.551	0.73	0.38	T	0.0	B	0.0	B	0.165	N	1.000	P	-0.55	N	1.56	T	-0.936	T	0.000	T	0.025	-1.328	0.032	2.77	0.744	-1.230	1.739	-1.327586	NA	0.38	0.501659	0.725077	NA	0.246	NA	7.8243744
870	19	9070837	9070837	G	A	exonic	MUC16	NA	nonsynonymous SNV	MUC16:NM_024690:exon3:c.C16609T:p.P5537S	exonic	ENSG00000181143	NA	nonsynonymous SNV	ENSG00000181143:ENST00000397910:exon3:c.C16609T:p.P5537S	NA	NA	19p13.2	NA	NA	NA	NA	rs2547067	0.82	0.82	0.82	0.819688	0.827	0.8512	0.8718	0.7549	0.8303	0.83	0.88	0.87	0.72	0.8296	0.88	0	D	0.0	B	0.0	B	.	.	.	.	-0.975	N	4.04	T	-1.054	T	0.000	T	0.037	-0.244	2.826	-2.0	-1.245	0.099	3.611	-0.243731	NA	0.16	0.85326	0.783114	NA	0.79	NA	7.8234734
870	10	82369219	82369219	T	A	exonic	SH2D4B	NA	nonsynonymous SNV	SH2D4B:NM_001145719:exon6:c.T753A:p.D251E,SH2D4B:NM_207372:exon6:c.T897A:p.D299E	exonic	ENSG00000178217	NA	nonsynonymous SNV	ENSG00000178217:ENST00000313455:exon6:c.T753A:p.D251E,ENSG00000178217:ENST00000339284:exon6:c.T897A:p.D299E,ENSG00000178217:ENST00000470604:exon6:c.T894A:p.D298E	NA	NA	10q23.1	NA	NA	NA	NA	rs17107368	0.19	0.19	0.196	0.14996	0.171	0.3442	0.1239	0.0242	0.1166	0.18	0.38	0.12	0.04	0.1691	0.38	1	T	0.001	B	0.002	B	0.079	N	0.201	P	-1.275	N	3.12	T	-1.003	T	0.000	T	0.036	0.116	4.624	-6.92	-0.527	-0.914	1.448	0.11602	NA	1	0.170116	0.053336	NA	0.181	NA	7.8231174
870	6	126210395	126210395	T	G	exonic	NCOA7	NA	nonsynonymous SNV	NCOA7:NM_001199621:exon8:c.T850G:p.S284A,NCOA7:NM_001122842:exon9:c.T1162G:p.S388A,NCOA7:NM_181782:exon9:c.T1195G:p.S399A,NCOA7:NM_001199619:exon10:c.T1195G:p.S399A,NCOA7:NM_001199620:exon11:c.T1195G:p.S399A	exonic	ENSG00000111912	NA	nonsynonymous SNV	ENSG00000111912:ENST00000413085:exon3:c.T589G:p.S197A,ENSG00000111912:ENST00000229634:exon8:c.T850G:p.S284A,ENSG00000111912:ENST00000392477:exon9:c.T1195G:p.S399A,ENSG00000111912:ENST00000368357:exon10:c.T1195G:p.S399A	NA	NA	6q22.32	NA	NA	NA	NA	rs6919947	0.52	0.52	0.514	0.478435	0.5189	0.5903	0.4899	0.4024	0.4162	0.52	0.62	0.51	0.4	0.488	0.62	1	T	0.0	B	0.0	B	0.054	N	1.000	P	-0.695	N	2.81	T	-1.069	T	0.005	T	0.129	-2.155	0.005	-7.76	-2.239	-0.657	3.829	-2.154608	NA	0.01	0.503372	0.430095	NA	0.601	NA	7.8230614
870	19	53612757	53612757	T	G	exonic	ZNF415	NA	nonsynonymous SNV	ZNF415:NM_001136038:exon4:c.A541C:p.I181L,ZNF415:NM_001164309:exon4:c.A541C:p.I181L,ZNF415:NM_018355:exon4:c.A541C:p.I181L	exonic	ENSG00000170954	NA	nonsynonymous SNV	ENSG00000170954:ENST00000243643:exon4:c.A541C:p.I181L,ENSG00000170954:ENST00000500065:exon4:c.A541C:p.I181L,ENSG00000170954:ENST00000421033:exon5:c.A577C:p.I193L,ENSG00000170954:ENST00000440291:exon5:c.A502C:p.I168L,ENSG00000170954:ENST00000448501:exon6:c.A685C:p.I229L,ENSG00000170954:ENST00000455735:exon7:c.A685C:p.I229L	NA	NA	19q13.42	NA	NA	NA	NA	rs1054485	0.55	0.55	0.54	0.544928	0.497	0.6131	0.647	0.4856	0.5317	0.5	0.6	0.65	0.51	0.5247	0.65	0.07	T	0.929	P	0.729	P	.	.	1.000	P	2.235	M	3.34	T	-0.972	T	0.000	T	0.107	1.622	11.38	-0.885	-0.431	0.170	2.620	1.621813	1.621813	0.11	0.48907	0.502951	NA	0.543	NA	7.8225634
870	7	99704892	99704892	C	T	exonic	TAF6	NA	nonsynonymous SNV	TAF6:NM_001190415:exon15:c.G2122A:p.G708S,TAF6:NM_005641:exon15:c.G2011A:p.G671S,TAF6:NM_139315:exon15:c.G2011A:p.G671S	exonic	ENSG00000106290	NA	nonsynonymous SNV	ENSG00000106290:ENST00000418432:exon14:c.G1783A:p.G595S,ENSG00000106290:ENST00000472509:exon14:c.G2182A:p.G728S,ENSG00000106290:ENST00000344095:exon15:c.G2011A:p.G671S,ENSG00000106290:ENST00000437822:exon15:c.G2122A:p.G708S,ENSG00000106290:ENST00000452041:exon15:c.G2011A:p.G671S,ENSG00000106290:ENST00000453269:exon15:c.G2011A:p.G671S	NA	NA	7q22.1	NA	NA	NA	NA	rs146348021	0.0014	0.0014	NA	0.00139776	0.003	NA	0.0058	NA	NA	NA	NA	0.01	NA	0.0036	0.01	0.83	T	0.6	P	0.208	B	0.006	N	0.867	N	0	N	0.93	T	-1.004	T	0.028	T	0.279	2.498	14.31	1.01	0.310	-0.099	6.766	2.498076	2.498076	0.3	0.005139	0.000459	NA	NA	NA	7.8215944
870	10	134218287	134218287	G	A	exonic	PWWP2B	NA	nonsynonymous SNV	PWWP2B:NM_001098637:exon2:c.G283A:p.E95K,PWWP2B:NM_138499:exon2:c.G283A:p.E95K	exonic	ENSG00000171813	NA	nonsynonymous SNV	ENSG00000171813:ENST00000305233:exon2:c.G283A:p.E95K,ENSG00000171813:ENST00000368609:exon2:c.G283A:p.E95K	NA	NA	10q26.3	NA	NA	NA	NA	rs199872085	0.0037	0.0037	NA	0.00139776	0.003	NA	0.0029	0.0008	0.001	0.01	NA	0.0028	0.01	0.0048	0.01	0.5	T	0.892	P	0.163	B	0.265	N	1.000	N	-0.14	N	1.55	T	-1.055	T	0.043	T	0.025	1.615	11.36	-0.469	-0.240	0.286	6.863	1.614637	1.614637	0.39	0.004903	0.000744	NA	NA	NA	7.8206304
870	6	33659472	33659472	C	G	exonic	ITPR3	NA	nonsynonymous SNV	ITPR3:NM_002224:exon53:c.C7306G:p.L2436V	exonic	ENSG00000096433	NA	nonsynonymous SNV	ENSG00000096433:ENST00000605930:exon53:c.C7306G:p.L2436V,ENSG00000096433:ENST00000374316:exon54:c.C7306G:p.L2436V	NA	NA	6p21.31	NA	NA	NA	NA	rs2229642	0.56	0.56	0.495	0.579673	0.4851	0.8998	0.6138	0.2156	0.8149	0.49	0.88	0.62	0.24	0.5678	0.88	0.35	T	0.0	B	0.002	B	0.989	N	1.000	P	0.345	N	-2.84	D	-0.954	T	0.254	T	0.063	-1.54	0.015	2.02	0.331	0.566	3.562	-1.540438	NA	0.65	0.46	0.307762	NA	0.536	NA	7.8204334
870	12	112375990	112375990	A	C	exonic	TMEM116	NA	nonsynonymous SNV	TMEM116:NM_001193453:exon5:c.T235G:p.C79G,TMEM116:NM_138341:exon5:c.T64G:p.C22G,TMEM116:NM_001193531:exon6:c.T340G:p.C114G	exonic	ENSG00000198270	NA	nonsynonymous SNV	ENSG00000198270:ENST00000355445:exon5:c.T235G:p.C79G,ENSG00000198270:ENST00000550831:exon5:c.T64G:p.C22G,ENSG00000198270:ENST00000437003:exon6:c.T64G:p.C22G,ENSG00000198270:ENST00000550037:exon6:c.T340G:p.C114G,ENSG00000198270:ENST00000550800:exon6:c.T64G:p.C22G,ENSG00000198270:ENST00000552374:exon6:c.T340G:p.C114G,ENSG00000198270:ENST00000354825:exon8:c.T64G:p.C22G	NA	NA	12q24.13	NA	NA	NA	NA	rs3752630	0.22	0.22	0.227	0.22484	0.165	0.2728	0.1383	0.3116	0.181	0.16	0.27	0.16	0.32	0.1842	0.32	1	T	0.0	B	0.0	B	0.001	N	0.000	P	-1.735	N	1.13	T	-0.960	T	0.000	T	0.126	0.999	9.079	3.84	0.363	0.422	5.684	0.998886	NA	0.59	0.165	0.277803	NA	0.268	NA	7.8191334
870	1	152286032	152286032	C	T	exonic	FLG	NA	nonsynonymous SNV	FLG:NM_002016:exon3:c.G1330A:p.G444R	exonic	ENSG00000143631	NA	nonsynonymous SNV	ENSG00000143631:ENST00000368799:exon3:c.G1330A:p.G444R	NA	NA	1q21.3	NA	NA	NA	NA	rs11588170	0.26	0.26	0.211	0.287141	0.1421	0.5823	0.3905	0.0113	0.4315	0.15	0.58	0.33	0.02	0.2287	0.58	0.57	T	0.942	P	0.816	P	.	.	1.000	P	1.685	L	5.72	T	-0.906	T	0.002	T	0.032	1.119	9.564	-0.615	-0.107	-0.639	3.006	1.119273	NA	0.23	0.144302	0.036541	NA	0.174	NA	7.8182314
870	7	22533452	22533452	C	T	exonic	STEAP1B	NA	nonsynonymous SNV	STEAP1B:NM_001164460:exon3:c.G88A:p.E30K	exonic	ENSG00000105889	NA	nonsynonymous SNV	ENSG00000105889:ENST00000404369:exon3:c.G88A:p.E30K,ENSG00000105889:ENST00000439708:exon3:c.G88A:p.E30K,ENSG00000105889:ENST00000424363:exon4:c.G88A:p.E30K	Score=399;Name=lod=56	NA	7p15.3	NA	NA	NA	NA	rs6966841	NA	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5171	0.55	.	.	0.0	B	0.001	B	.	.	1.000	P	-1.745	N	3.11	T	-0.942	T	0.006	T	0.219	-0.973	0.303	1.06	-0.052	0.614	3.196	-0.972578	NA	1	NA	NA	NA	0.5	NA	7.8162334
870	18	56936395	56936395	T	C	exonic	RAX	NA	synonymous SNV	RAX:NM_013435:exon3:c.A882G:p.Q294Q	exonic	ENSG00000134438	NA	synonymous SNV	ENSG00000134438:ENST00000334889:exon3:c.A882G:p.Q294Q	Score=581;Name=lod=305	NA	18q21.32	NA	Name=Rad21,CTCF	Name=37	NA	rs7226481	0.23	0.23	0.187	0.228235	0.3032	0.129	0.1671	0.2421	0.2781	0.31	0.15	0.2	0.25	0.3229	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.759359	NA	NA	0.224408	0.182687	ID=COSM438275;OCCURENCE=1(breast)	0.051	NA	7.8161586
870	2	120439230	120439230	C	G	exonic	TMEM177	NA	nonsynonymous SNV	TMEM177:NM_001105198:exon2:c.C801G:p.D267E,TMEM177:NM_001105199:exon2:c.C801G:p.D267E,TMEM177:NM_030577:exon2:c.C801G:p.D267E	exonic	ENSG00000144120	NA	nonsynonymous SNV	ENSG00000144120:ENST00000272521:exon2:c.C801G:p.D267E,ENSG00000144120:ENST00000401466:exon2:c.C801G:p.D267E,ENSG00000144120:ENST00000424086:exon2:c.C801G:p.D267E	NA	NA	2q14.2	NA	NA	NA	NA	rs1983406	0.78	0.78	0.76	0.778155	0.8439	0.8284	0.8285	0.6029	0.8599	0.85	0.81	0.8	0.61	0.83	0.85	1	T	0.0	B	0.0	B	0.841	N	0.003	P	-0.55	N	1.07	T	-1.054	T	0.000	T	0.007	-3.05	0.001	-9.21	-5.322	-1.924	3.875	-3.050185	NA	0.81	0.843837	0.629142	NA	0.826	NA	7.8155964
871	19	54849942	54849942	G	A	exonic	LILRA4	NA	nonsynonymous SNV	LILRA4:NM_012276:exon3:c.C80T:p.P27L	exonic	ENSG00000239961	NA	nonsynonymous SNV	ENSG00000239961:ENST00000291759:exon3:c.C80T:p.P27L	NA	NA	19q13.42	NA	NA	NA	NA	rs2241384	0.19	0.19	0.179	0.197684	0.169	0.2679	0.2133	0.1566	0.1994	0.17	0.24	0.21	0.16	0.1853	0.24	0.1	T	0.048	B	0.063	B	0.072	N	1.000	P	2.485	M	2.58	T	-1.035	T	0.000	T	0.021	0.412	6.236	-1.05	-0.466	0.493	4.773	0.411693	NA	0.08	0.165233	0.159101	NA	0.217	NA	7.8138004
871	12	10251445	10251445	C	G	exonic	CLEC1A	NA	nonsynonymous SNV	CLEC1A:NM_016511:exon1:c.G77C:p.G26A	exonic	ENSG00000150048	NA	nonsynonymous SNV	ENSG00000150048:ENST00000315330:exon1:c.G77C:p.G26A,ENSG00000150048:ENST00000420265:exon1:c.G77C:p.G26A,ENSG00000150048:ENST00000457018:exon1:c.G77C:p.G26A,ENSG00000150048:ENST00000544104:exon1:c.G77C:p.G26A,ENSG00000150048:ENST00000414501:exon2:c.G77C:p.G26A	NA	NA	12p13.2	NA	Name=TAF1,Pol2	NA	NA	rs2306894	0.7	0.7	0.72	0.670527	0.8728	0.3502	0.6009	0.8918	0.5429	0.88	0.33	0.66	0.87	0.7679	0.9	0.83	T	0.0	B	0.0	B	0.035	N	1.000	P	-1.23	N	5.49	T	-0.981	T	0.000	T	0.159	-0.54	1.549	4.66	0.715	0.958	7.889	-0.539636	NA	0.81	0.87907	0.899001	ID=COSM147434;OCCURENCE=1(stomach),1(large_intestine)	0.812	NA	7.8135634
871	1	176863836	176863836	G	C	exonic	ASTN1	NA	nonsynonymous SNV	ASTN1:NM_004319:exon17:c.C2802G:p.H934Q,ASTN1:NM_207108:exon17:c.C2802G:p.H934Q	exonic	ENSG00000152092	NA	nonsynonymous SNV	ENSG00000152092:ENST00000361833:exon17:c.C2802G:p.H934Q,ENSG00000152092:ENST00000367654:exon17:c.C2826G:p.H942Q,ENSG00000152092:ENST00000367657:exon17:c.C2802G:p.H934Q,ENSG00000152092:ENST00000424564:exon17:c.C2802G:p.H934Q	Score=530;Name=lod=190	NA	1q25.2	Score=853;Name=V$P300_01	NA	NA	NA	rs2281180	0.83	0.83	0.817	0.829273	0.8588	0.8006	0.7233	0.8601	0.862	0.85	0.81	0.78	0.86	0.8282	0.87	0.76	T	0.0	B	0.0	B	0.001	N	1.000	P	-0.895	N	1.66	T	-1.012	T	0.000	T	0.142	-0.173	3.159	2.28	0.308	0.771	3.169	-0.172549	NA	0.83	0.835116	0.874035	NA	0.884	NA	7.8112174
871	18	6912143	6912143	A	C	exonic	ARHGAP28	NA	nonsynonymous SNV	ARHGAP28:NM_001010000:exon17:c.A1703C:p.Q568P	exonic	ENSG00000088756	NA	nonsynonymous SNV	ENSG00000088756:ENST00000314319:exon16:c.A1703C:p.Q568P,ENSG00000088756:ENST00000419673:exon17:c.A1703C:p.Q568P,ENSG00000088756:ENST00000531294:exon17:c.A1688C:p.Q563P,ENSG00000088756:ENST00000383472:exon18:c.A2180C:p.Q727P	Score=272;Name=lod=17	NA	18p11.31	NA	NA	NA	NA	rs1056408	0.78	0.78	0.784	0.729233	0.8678	0.627	0.7233	0.7716	0.6391	0.87	0.7	0.76	0.76	0.7949	0.87	1	T	0.0	B	0.0	B	.	.	0.424	P	-0.75	N	3.23	T	-0.999	T	0.000	T	0.095	-0.509	1.671	4.06	0.394	1.172	8.883	-0.509013	NA	NA	0.859535	0.789832	NA	0.703	NA	7.8110984
871	6	41038845	41038845	C	T	intronic	OARD1	NA	NA	NA	exonic	ENSG00000124596	NA	stopgain	ENSG00000124596:ENST00000469104:exon3:c.G210A:p.W70X,ENSG00000124596:ENST00000471367:exon3:c.G210A:p.W70X	NA	NA	6p21.1	NA	NA	NA	NA	rs13191323	0.28	0.28	0.301	0.321685	0.1869	0.2728	0.281	0.5023	0.2955	0.19	0.27	0.27	0.46	0.2724	0.46	0.11	T	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	2.289	13.61	-6.96	-0.901	-1.452	5.168	2.289278	2.289278	NA	0.231047	0.449841	NA	0.254	NA	7.809653
871	11	66033430	66033430	C	T	exonic	KLC2	NA	nonsynonymous SNV	KLC2:NM_001134774:exon12:c.C1318T:p.P440S,KLC2:NM_001134775:exon13:c.C1549T:p.P517S,KLC2:NM_001134776:exon13:c.C1549T:p.P517S,KLC2:NM_022822:exon13:c.C1549T:p.P517S	exonic	ENSG00000174996	NA	nonsynonymous SNV	ENSG00000174996:ENST00000394065:exon11:c.C1132T:p.P378S,ENSG00000174996:ENST00000394066:exon11:c.C1318T:p.P440S,ENSG00000174996:ENST00000421552:exon12:c.C1318T:p.P440S,ENSG00000174996:ENST00000316924:exon13:c.C1549T:p.P517S,ENSG00000174996:ENST00000394067:exon13:c.C1549T:p.P517S,ENSG00000174996:ENST00000417856:exon13:c.C1549T:p.P517S	Score=333;Name=lod=30	NA	11q13.2	NA	NA	NA	NA	rs2276036	0.19	0.19	0.16	0.19369	0.173	0.2887	0.1268	0.1823	0.18	0.18	0.28	0.14	0.16	0.179	0.28	0.48	T	0.0	B	0.001	B	0.309	N	0.000	P	0.895	L	-0.94	T	-1.103	T	0.000	T	0.097	0.101	4.543	0.365	0.241	-0.074	7.779	0.100733	NA	0.42	0.173346	0.173339	NA	0.203	NA	7.8079874
871	22	42537630	42537630	C	G	ncRNA_exonic	CYP2D7P1	NA	NA	NA	exonic	ENSG00000205702	NA	unknown	UNKNOWN	NA	NA	22q13.2	NA	NA	NA	NA	rs139038830	0.01	0.01	0.005	0.0111821	0.008	NA	0.0101	0.0189	0.0164	0.01	NA	0.01	0.02	0.0187	0.02	0.76	T	0.0	B	0.001	B	0.479	N	1.000	N	.	.	.	.	-0.993	T	0.024	T	.	-1.857	0.009	-4.14	-0.695	-2.039	12.151	-1.856993	NA	1	NA	NA	NA	NA	NA	7.8066333
871	2	169721377	169721377	G	A	exonic	NOSTRIN	NA	nonsynonymous SNV	NOSTRIN:NM_001171632:exon15:c.G1334A:p.G445E,NOSTRIN:NM_052946:exon15:c.G1184A:p.G395E,NOSTRIN:NM_001039724:exon16:c.G1418A:p.G473E,NOSTRIN:NM_001171631:exon21:c.G1589A:p.G530E	exonic	ENSG00000163072	NA	nonsynonymous SNV	ENSG00000163072:ENST00000397206:exon15:c.G1184A:p.G395E,ENSG00000163072:ENST00000397209:exon15:c.G1334A:p.G445E,ENSG00000163072:ENST00000421711:exon15:c.G1334A:p.G445E,ENSG00000163072:ENST00000445023:exon15:c.G1184A:p.G395E,ENSG00000163072:ENST00000317647:exon16:c.G1418A:p.G473E,ENSG00000163072:ENST00000444448:exon19:c.G1589A:p.G530E,ENSG00000163072:ENST00000458381:exon21:c.G1589A:p.G530E	Score=534;Name=lod=198	NA	2q31.1	NA	NA	NA	NA	rs479661	0.89	0.89	0.898	0.907149	0.832	0.9395	0.8098	0.9629	0.9448	0.84	0.93	0.82	0.97	0.8639	0.97	0.77	T	0.0	B	0.001	B	0.021	N	0.000	P	0.255	N	1.64	T	-0.965	T	0.000	T	0.152	0.255	5.378	4.96	0.834	2.153	8.843	0.255043	NA	1	0.831142	0.945099	NA	0.812	NA	7.8062914
872	14	64519455	64519455	A	G	exonic	SYNE2	NA	nonsynonymous SNV	SYNE2:NM_015180:exon48:c.A8824G:p.I2942V,SYNE2:NM_182914:exon48:c.A8824G:p.I2942V	exonic	ENSG00000054654	NA	nonsynonymous SNV	ENSG00000054654:ENST00000344113:exon48:c.A8824G:p.I2942V,ENSG00000054654:ENST00000358025:exon48:c.A8824G:p.I2942V,ENSG00000054654:ENST00000554584:exon48:c.A8923G:p.I2975V	NA	NA	14q23.2	NA	NA	NA	NA	rs3829767	0.71	0.71	0.679	0.665136	0.8628	0.7778	0.7882	0.3026	0.7485	0.86	0.81	0.78	0.33	0.8031	0.86	0.3	T	0.002	B	0.005	B	0.617	N	0.999	P	0.805	L	0.39	T	-0.956	T	0.000	T	0.043	-0.604	1.305	-7.86	-1.044	-0.842	0.480	-0.603679	NA	0.05	0.86367	0.413219	NA	0.681	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118556.1;CLNDSDB=.;CLNDSDBID=.	7.8037634
872	1	207851611	207851611	A	G	exonic	CR1L	NA	nonsynonymous SNV	CR1L:NM_175710:exon3:c.A346G:p.R116G	exonic	ENSG00000197721	NA	nonsynonymous SNV	ENSG00000197721:ENST00000294997:exon2:c.A178G:p.R60G,ENSG00000197721:ENST00000508064:exon3:c.A346G:p.R116G	NA	NA	1q32.2	NA	NA	NA	NA	rs2296158	0.52	0.52	0.486	0.526558	0.492	0.6984	0.379	0.4493	0.5941	0.5	0.65	0.41	0.47	0.5171	0.65	1	T	0.0	B	0.0	B	.	.	1.000	P	-2.82	N	0.43	T	-0.921	T	0.000	T	0.057	-0.892	0.455	2.73	0.466	2.122	5.862	-0.892119	NA	1	0.522303	0.478967	NA	0.384	NA	7.8019304
872	2	227954599	227954599	G	A	exonic	COL4A4	NA	nonsynonymous SNV	COL4A4:NM_000092:exon21:c.C1444T:p.P482S	exonic	ENSG00000081052	NA	nonsynonymous SNV	ENSG00000081052:ENST00000329662:exon21:c.C1444T:p.P482S,ENSG00000081052:ENST00000396625:exon21:c.C1444T:p.P482S	NA	NA	2q36.3	NA	NA	NA	NA	rs2229814	0.52	0.52	0.51	0.548522	0.498	0.5198	0.6081	0.5113	0.638	0.51	0.5	0.59	0.5	0.5344	0.59	0.72	T	0.0	B	0.0	B	.	.	1.000	P	2.49	M	-2.53	D	-0.903	T	0.000	T	0.037	-1.126	0.121	0.339	0.089	0.624	1.222	-1.125898	NA	0.44	0.501707	0.525093	NA	0.486	NA	7.7992264
872	13	25876011	25876011	G	A	exonic	NUPL1	NA	nonsynonymous SNV	NUPL1:NM_001008564:exon1:c.G100A:p.A34T,NUPL1:NM_014089:exon1:c.G100A:p.A34T	exonic	ENSG00000139496	NA	nonsynonymous SNV	ENSG00000139496:ENST00000381718:exon1:c.G100A:p.A34T,ENSG00000139496:ENST00000381736:exon1:c.G100A:p.A34T,ENSG00000139496:ENST00000381747:exon1:c.G100A:p.A34T,ENSG00000139496:ENST00000463407:exon1:c.G100A:p.A34T,ENSG00000139496:ENST00000465068:exon1:c.G100A:p.A34T,ENSG00000139496:ENST00000481980:exon1:c.G100A:p.A34T,ENSG00000139496:ENST00000490231:exon1:c.G100A:p.A34T	NA	NA	13q12.13	NA	Name=GABP,Pol2,E2F6,Pol2(b),Egr-1,HA-E2F1	Name=31	NA	rs11556093	0.41	0.41	0.383	0.367212	0.5089	0.5585	0.3646	0.0688	0.4294	0.51	0.57	0.39	0.07	0.494	0.57	1	T	0.001	B	0.001	B	0.045	N	0.153	P	0.35	N	1.45	T	-0.926	T	0.000	T	0.244	0.535	6.899	-0.146	0.069	-0.185	3.944	0.535406	NA	0.22	0.531519	0.138448	NA	0.37	NA	7.7989144
872	1	86952324	86952324	A	G	exonic	CLCA1	NA	nonsynonymous SNV	CLCA1:NM_001285:exon7:c.A1070G:p.N357S	exonic	ENSG00000016490	NA	nonsynonymous SNV	ENSG00000016490:ENST00000394711:exon7:c.A1070G:p.N357S,ENSG00000016490:ENST00000234701:exon8:c.A1070G:p.N357S	Score=300;Name=lod=22	NA	1p22.3	NA	NA	NA	NA	rs2734705	0.87	0.87	0.865	0.886981	0.835	0.8472	0.9078	0.9425	0.8916	0.83	0.88	0.88	0.91	0.8629	0.93	1	T	0.0	B	0.001	B	0.000	N	1.000	P	-0.525	N	2.78	T	-0.912	T	0.003	T	0.015	-0.26	2.753	4.58	1.336	0.527	2.310	-0.259698	NA	0.63	0.836744	0.932365	NA	0.855	NA	7.7986894
872	14	64522843	64522843	A	G	exonic	SYNE2	NA	nonsynonymous SNV	SYNE2:NM_015180:exon49:c.A9926G:p.H3309R,SYNE2:NM_182914:exon49:c.A9926G:p.H3309R	exonic	ENSG00000054654	NA	nonsynonymous SNV	ENSG00000054654:ENST00000344113:exon49:c.A9926G:p.H3309R,ENSG00000054654:ENST00000358025:exon49:c.A9926G:p.H3309R,ENSG00000054654:ENST00000554584:exon49:c.A10025G:p.H3342R	NA	NA	14q23.2	NA	NA	NA	NA	rs8010699	0.73	0.73	0.706	0.682308	0.8638	0.7778	0.7968	0.3623	0.7485	0.86	0.81	0.79	0.39	0.8074	0.86	0.35	T	0.039	B	0.043	B	0.043	N	0.993	P	0	N	1.4	T	-1.049	T	0.000	T	0.052	-0.146	3.287	3.4	0.440	1.102	7.513	-0.145706	NA	0.05	0.863988	0.479328	NA	0.696	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118561.1;CLNDSDB=.;CLNDSDBID=.	7.7981454
872	1	10318652	10318652	C	G	exonic	KIF1B	NA	synonymous SNV	KIF1B:NM_015074:exon4:c.C285G:p.A95A,KIF1B:NM_183416:exon4:c.C285G:p.A95A	exonic	ENSG00000054523	NA	synonymous SNV	ENSG00000054523:ENST00000377081:exon3:c.C285G:p.A95A,ENSG00000054523:ENST00000263934:exon4:c.C285G:p.A95A,ENSG00000054523:ENST00000377083:exon4:c.C285G:p.A95A,ENSG00000054523:ENST00000377086:exon4:c.C285G:p.A95A,ENSG00000054523:ENST00000377093:exon4:c.C285G:p.A95A	Score=663;Name=lod=661	NA	1p36.22	Score=785;Name=V$OCT1_01	NA	NA	NA	rs12402052	0.26	0.26	0.22	0.230032	0.3052	0.2887	0.3199	0.056	0.2638	0.31	0.31	0.35	0.06	0.2689	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.168974	NA	NA	0.29686	0.091466	ID=COSM146389,COSM146390;OCCURENCE=1(stomach)	0.196	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117406.2;CLNDSDB=.;CLNDSDBID=.	7.7957066
872	19	44351694	44351694	C	T	exonic	ZNF283	NA	nonsynonymous SNV	ZNF283:NM_181845:exon7:c.C941T:p.T314I	exonic	ENSG00000167637	NA	nonsynonymous SNV	ENSG00000167637:ENST00000588797:exon6:c.C524T:p.T175I,ENSG00000167637:ENST00000324461:exon7:c.C941T:p.T314I	Score=468;Name=lod=106	NA	19q13.31	NA	Name=SETDB1,ZNF274,KAP1	Name=6	NA	rs2195980	0.79	0.79	0.818	0.802915	0.8638	0.5982	0.6513	0.9592	0.8476	0.87	0.59	0.7	0.96	0.817	0.96	0.08	T	0.0	B	0.002	B	.	.	0.000	P	1.78	L	1.78	T	-1.063	T	0.000	T	0.071	1.141	9.647	1.97	0.380	0.064	4.910	1.140523	NA	0.12	0.85751	0.947053	NA	0.848	NA	7.7950234
873	7	138732497	138732497	G	A	exonic	ZC3HAV1	NA	nonsynonymous SNV	ZC3HAV1:NM_020119:exon13:c.C2552T:p.T851I	exonic	ENSG00000105939	NA	nonsynonymous SNV	ENSG00000105939:ENST00000242351:exon13:c.C2552T:p.T851I,ENSG00000105939:ENST00000464606:exon13:c.C2918T:p.T973I	NA	NA	7q34	NA	NA	NA	NA	rs3735007	0.5	0.5	0.534	0.53135	0.5149	0.3611	0.3775	0.7141	0.5859	0.5	0.37	0.42	0.73	0.5057	0.73	0.76	T	0.0	B	0.001	B	0.778	N	1.000	P	0.6	N	2.51	T	-0.976	T	0.000	T	0.02	-0.837	0.581	-5.97	-1.518	-0.368	17.269	-0.836941	NA	0.64	0.518605	0.702905	NA	0.5	NA	7.7941284
873	10	129903016	129903016	T	C	exonic	MKI67	NA	nonsynonymous SNV	MKI67:NM_001145966:exon12:c.A6008G:p.N2003S,MKI67:NM_002417:exon13:c.A7088G:p.N2363S	exonic	ENSG00000148773	NA	nonsynonymous SNV	ENSG00000148773:ENST00000368653:exon12:c.A6008G:p.N2003S,ENSG00000148773:ENST00000368654:exon13:c.A7088G:p.N2363S	NA	NA	10q26.2	NA	NA	NA	NA	rs7071768	0.48	0.48	0.44	0.463658	0.5219	0.381	0.6095	0.4607	0.3896	0.52	0.41	0.58	0.4	0.4972	0.58	0.93	T	0.0	B	0.0	B	0.000	N	1.000	P	-1.39	N	4.72	T	-0.936	T	0.000	T	0.004	-0.973	0.302	-5.36	-1.763	-0.572	9.392	-0.973252	NA	0.77	0.520233	0.459601	NA	0.435	NA	7.7940004
873	17	72938100	72938100	T	C	exonic	OTOP3	NA	nonsynonymous SNV	OTOP3:NM_001272005:exon3:c.T541C:p.S181P,OTOP3:NM_178233:exon3:c.T595C:p.S199P	exonic	ENSG00000182938	NA	nonsynonymous SNV	ENSG00000182938:ENST00000328801:exon3:c.T595C:p.S199P	Score=300;Name=lod=22	NA	17q25.1	NA	NA	NA	NA	rs1542752	0.92	0.92	0.923	0.90615	0.8429	0.9603	0.9035	0.9546	0.8517	0.86	0.96	0.88	0.96	0.866	0.96	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-2.045	N	3.47	T	-1.015	T	0.000	T	0.084	-1.019	0.234	3.65	0.738	2.160	7.134	-1.018675	NA	1	0.83093	0.936904	NA	0.935	NA	7.7935034
873	3	88189341	88189341	T	C	exonic	ZNF654	NA	nonsynonymous SNV	ZNF654:NM_018293:exon1:c.T881C:p.I294T	exonic	ENSG00000175105	NA	nonsynonymous SNV	ENSG00000175105:ENST00000309495:exon1:c.T881C:p.I294T	Score=592;Name=lod=341	NA	3p11.1	NA	NA	NA	NA	rs7653652	0.79	0.79	0.768	0.783147	0.8429	0.8363	0.8516	0.5696	0.907	0.83	0.86	0.87	0.59	0.8426	0.87	0.42	T	0.039	B	0.016	B	0.488	N	0.000	P	0.895	L	1.33	T	-0.966	T	0.000	T	0.109	0.248	5.34	4.73	2.248	0.909	7.981	0.248031	NA	0.41	0.855302	0.636895	NA	0.674	NA	7.7925314
873	1	28209362	28209362	T	C	exonic	THEMIS2	NA	synonymous SNV	THEMIS2:NM_001105556:exon4:c.T1527C:p.V509V	exonic	ENSG00000130775	NA	synonymous SNV	ENSG00000130775:ENST00000373921:exon4:c.T1527C:p.V509V,ENSG00000130775:ENST00000328928:exon5:c.T1140C:p.V380V	NA	NA	1p35.3	NA	NA	NA	NA	rs3766399	0.47	0.47	0.43	0.474441	0.6322	0.504	0.5086	0.1566	0.6871	0.63	0.49	0.53	0.18	0.5908	0.65	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.089	T	0.000	T	.	-1.185	0.08	-9.96	-2.370	-3.595	11.876	-1.185382	NA	NA	0.651403	0.264865	NA	0.442	NA	7.7922636
873	3	57494138	57494138	A	C	exonic	DNAH12	NA	nonsynonymous SNV	DNAH12:NM_178504:exon7:c.T672G:p.D224E,DNAH12:NM_198564:exon7:c.T672G:p.D224E	exonic	ENSG00000174844	NA	nonsynonymous SNV	ENSG00000174844:ENST00000311202:exon7:c.T672G:p.D224E,ENSG00000174844:ENST00000351747:exon7:c.T672G:p.D224E,ENSG00000174844:ENST00000389536:exon7:c.T672G:p.D224E,ENSG00000174844:ENST00000495027:exon7:c.T672G:p.D224E	NA	NA	3p14.3	NA	NA	Name=3	NA	rs6445902	0.21	0.21	0.231	0.235623	0.164	0.0813	0.1556	0.4947	0.1748	0.16	0.07	0.14	0.51	0.187	0.51	0.41	T	0.452	B	0.076	B	0.091	N	1.000	P	0.69	N	3.6	T	-0.927	T	0.000	T	0.031	1.002	9.093	-0.563	-0.003	0.339	2.309	1.002223	NA	0.41	0.190321	0.470495	NA	0.326	NA	7.7920124
873	6	43418691	43418691	G	A	exonic	DLK2	NA	synonymous SNV	DLK2:NM_023932:exon6:c.C738T:p.T246T,DLK2:NM_206539:exon6:c.C738T:p.T246T	exonic	ENSG00000171462	NA	synonymous SNV	ENSG00000171462:ENST00000357338:exon6:c.C738T:p.T246T,ENSG00000171462:ENST00000372485:exon6:c.C720T:p.T240T,ENSG00000171462:ENST00000372488:exon6:c.C738T:p.T246T,ENSG00000171462:ENST00000414245:exon6:c.C720T:p.T240T	Score=470;Name=lod=108	NA	6p21.1	NA	NA	NA	NA	rs1214748	0.26	0.26	0.273	0.278954	0.2863	0.0804	0.2147	0.5424	0.1656	0.27	0.07	0.22	0.5	0.2776	0.5	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.007	T	0.029	T	.	0.745	7.951	-2.45	-0.280	-0.388	4.767	0.744851	NA	NA	0.310814	0.501589	NA	0.312	NA	7.7919526
873	6	26108282	26108282	C	G	exonic	HIST1H1T	NA	nonsynonymous SNV	HIST1H1T:NM_005323:exon1:c.G40C:p.V14L	exonic	ENSG00000187475	NA	nonsynonymous SNV	ENSG00000187475:ENST00000338379:exon1:c.G40C:p.V14L	NA	NA	6p22.2	NA	Name=TBP	NA	NA	rs198844	0.4	0.4	0.406	0.407947	0.5258	0.2996	0.4207	0.3631	0.4499	0.54	0.23	0.43	0.34	0.4867	0.54	0.21	T	0.0	B	0.0	B	0.001	N	1.000	P	0	N	2.77	T	-0.902	T	0.004	T	0.06	0.263	5.42	-0.586	-0.605	-1.327	6.682	0.262709	NA	0.48	0.529535	0.393327	NA	0.413	NA	7.7912984
873	20	1559101	1559101	T	G	exonic	SIRPB1	NA	nonsynonymous SNV	SIRPB1:NM_001083910:exon2:c.A316C:p.S106R,SIRPB1:NM_006065:exon2:c.A316C:p.S106R	exonic	ENSG00000101307,ENSG00000260861	NA	nonsynonymous SNV	ENSG00000101307:ENST00000262929:exon2:c.A313C:p.S105R,ENSG00000101307:ENST00000381603:exon2:c.A316C:p.S106R,ENSG00000101307:ENST00000381605:exon2:c.A316C:p.S106R,ENSG00000101307:ENST00000563840:exon2:c.A313C:p.S105R,ENSG00000260861:ENST00000564763:exon2:c.A316C:p.S106R,ENSG00000260861:ENST00000567028:exon2:c.A313C:p.S105R	Score=289;Name=lod=20	NA	20p13	NA	NA	NA	NA	rs41275422	0.27	0.27	0.235	0.307708	0.1551	0.6409	0.1787	0.1089	0.4816	0.15	0.62	0.18	0.14	0.235	0.62	1	T	0.0	B	0.011	B	0.003	N	0.000	P	-1.475	N	-0.11	T	-0.927	T	0.000	T	0.192	-2.228	0.005	1.22	0.340	0.159	6.270	-2.227881	NA	1	0.153421	0.099181	NA	0.196	NA	7.7898124
873	21	47836571	47836571	C	T	exonic	PCNT	NA	nonsynonymous SNV	PCNT:NM_006031:exon30:c.C6739T:p.H2247Y	exonic	ENSG00000160299	NA	nonsynonymous SNV	ENSG00000160299:ENST00000359568:exon30:c.C6739T:p.H2247Y	NA	NA	21q22.3	NA	NA	NA	NA	rs61735812	0.02	0.02	0.01	0.0139776	0.0209	NA	0.0173	0.025	0.0041	0.02	NA	0.02	0.03	0.0123	0.03	1	T	0.78	P	0.145	B	0.900	N	1.000	N	1.1	L	4.9	T	-0.964	T	0.001	T	0.037	-0.431	1.993	-1.56	-0.167	0.084	4.966	-0.431317	NA	1	0.011038	0.020329	NA	NA	NA	7.7890954
873	1	152192114	152192114	C	T	exonic	HRNR	NA	nonsynonymous SNV	HRNR:NM_001009931:exon3:c.G1991A:p.R664Q	exonic	ENSG00000197915	NA	nonsynonymous SNV	ENSG00000197915:ENST00000368801:exon3:c.G1991A:p.R664Q	NA	NA	1q21.3	NA	NA	NA	NA	rs7520249	0.61	0.61	0.61	0.559505	0.83	0.38	0.5576	0.528	0.5102	0.82	0.37	0.63	0.53	0.7143	0.82	0.95	T	0.016	B	0.001	B	.	.	1.000	P	0.46	N	3.58	T	-0.918	T	0.002	T	0.07	1.033	9.219	-3.67	-0.609	-1.648	5.359	1.032807	NA	0.54	NA	NA	ID=COSM1334101;OCCURENCE=1(large_intestine)	0.601	NA	7.7890334
873	1	118165691	118165691	C	T	exonic	FAM46C	NA	synonymous SNV	FAM46C:NM_017709:exon2:c.C201T:p.H67H	exonic	ENSG00000183508	NA	synonymous SNV	ENSG00000183508:ENST00000369448:exon2:c.C201T:p.H67H	Score=505;Name=lod=150	NA	1p12	Score=868;Name=V$ELK1_02	Name=CTCF	NA	NA	rs1630312	0.25	0.25	0.245	0.207069	0.2873	0.0923	0.281	0.1974	0.2035	0.31	0.14	0.33	0.25	0.2641	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.133908	2.133908	NA	0.326512	0.266909	NA	0.261	NA	7.7887546
874	18	61650865	61650865	G	A	exonic	SERPINB8	NA	synonymous SNV	SERPINB8:NM_001031848:exon5:c.G477A:p.L159L,SERPINB8:NM_002640:exon5:c.G477A:p.L159L,SERPINB8:NM_198833:exon5:c.G477A:p.L159L	exonic	ENSG00000166401	NA	synonymous SNV	ENSG00000166401:ENST00000353706:exon5:c.G477A:p.L159L,ENSG00000166401:ENST00000397985:exon5:c.G477A:p.L159L,ENSG00000166401:ENST00000397988:exon5:c.G477A:p.L159L,ENSG00000166401:ENST00000441827:exon5:c.G477A:p.L159L	Score=363;Name=lod=40	NA	18q22.1	NA	NA	NA	NA	rs11537989	0.24	0.24	0.211	0.216054	0.3002	0.3224	0.2795	0.0393	0.2137	0.29	0.28	0.31	0.07	0.2757	0.31	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	-0.029	3.867	3.87	0.942	-0.225	7.768	-0.028764	NA	NA	0.308256	0.105765	NA	0.188	NA	7.7825106
874	16	53503943	53503943	C	G	exonic	RBL2	NA	synonymous SNV	RBL2:NM_005611:exon15:c.C2091G:p.R697R	exonic	ENSG00000103479	NA	synonymous SNV	ENSG00000103479:ENST00000262133:exon15:c.C2091G:p.R697R,ENSG00000103479:ENST00000544405:exon15:c.C1869G:p.R623R	Score=284;Name=lod=19	NA	16q12.2	Score=872;Name=V$SREBP1_02	Name=CTCF	NA	NA	rs11540358	0.23	0.23	0.219	0.254393	0.2992	0.0496	0.2406	0.3835	0.2546	0.29	0.03	0.26	0.34	0.268	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.680303	NA	NA	0.316977	0.348499	NA	0.326	NA	7.7824896
874	3	41756986	41756986	A	T	exonic	ULK4	NA	nonsynonymous SNV	ULK4:NM_017886:exon24:c.T2530A:p.L844M	exonic	ENSG00000168038	NA	nonsynonymous SNV	ENSG00000168038:ENST00000301831:exon24:c.T2530A:p.L844M	NA	NA	3p22.1	NA	NA	Name=8	NA	rs61744385	0.25	0.25	0.277	0.265575	0.1839	0.1478	0.1628	0.5348	0.18	0.19	0.15	0.16	0.53	0.1975	0.53	0.51	T	0.001	B	0.003	B	0.019	N	0.860	P	-1.01	N	0.66	T	-0.950	T	0.000	T	0.07	-0.367	2.271	-1.82	-0.930	0.121	4.479	-0.366965	NA	0.48	0.171356	0.465377	NA	0.283	NA	7.7805774
874	7	45009341	45009341	A	G	exonic	MYO1G	NA	nonsynonymous SNV	MYO1G:NM_033054:exon11:c.T1466C:p.M489T	exonic	ENSG00000136286	NA	nonsynonymous SNV	ENSG00000136286:ENST00000258787:exon11:c.T1466C:p.M489T	Score=466;Name=lod=104	NA	7p13	Score=825;Name=V$PAX4_01	NA	NA	NA	rs3735485	0.89	0.89	0.89	0.900559	0.8439	0.8938	0.8602	0.9834	0.8824	0.84	0.91	0.85	0.98	0.8687	0.98	0.34	T	0.0	B	0.0	B	0.119	N	1.000	P	-0.83	N	-0.5	T	-0.991	T	0.000	T	0.056	-0.596	1.333	4.04	0.617	-0.340	5.173	-0.596128	NA	0.48	0.840893	0.963232	NA	0.964	NA	7.7798404
874	17	3397702	3397702	C	T	exonic	ASPA	NA	synonymous SNV	ASPA:NM_000049:exon5:c.C693T:p.Y231Y,ASPA:NM_001128085:exon6:c.C693T:p.Y231Y	exonic	ENSG00000108381	NA	synonymous SNV	ENSG00000108381:ENST00000263080:exon5:c.C693T:p.Y231Y,ENSG00000108381:ENST00000456349:exon6:c.C693T:p.Y231Y	Score=585;Name=lod=318	NA	17p13.2	Score=817;Name=V$BRN2_01	NA	NA	NA	rs12948217	0.21	0.21	0.202	0.203674	0.3101	0.0496	0.1844	0.2345	0.2249	0.31	0.05	0.23	0.21	0.2656	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.371912	NA	NA	0.312442	0.243985	NA	0.283	CLINSIG=pathogenic;CLNDBN=Spongy_degeneration_of_central_nervous_system;CLNREVSTAT=single;CLNACC=RCV000002727.1;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet:SNOMED_CT;CLNDSDBID=NBK1234:C0206307:271900:ORPHA141:80544005	7.7785246
874	19	10668673	10668673	A	G	exonic	KRI1	NA	nonsynonymous SNV	KRI1:NM_023008:exon14:c.T1352C:p.L451P	exonic	ENSG00000129347	NA	nonsynonymous SNV	ENSG00000129347:ENST00000361821:exon13:c.T1340C:p.L447P,ENSG00000129347:ENST00000312962:exon14:c.T1352C:p.L451P	NA	NA	19p13.2	NA	NA	NA	NA	rs1982074	0.16	0.16	0.128	0.176917	0.163	0.2192	0.33	0.0378	0.227	0.15	0.22	0.27	0.03	0.1979	0.27	0.31	T	0.001	B	0.001	B	0.051	N	0.034	P	-0.12	N	3.35	T	-0.907	T	0.000	T	0.081	0.793	8.178	-5.26	-0.810	0.533	12.820	0.793193	NA	0.27	0.193953	0.060826	NA	0.123	NA	7.7784804
874	22	23631801	23631801	T	C	exonic	BCR	NA	synonymous SNV	BCR:NM_004327:exon13:c.T2700C:p.N900N,BCR:NM_021574:exon13:c.T2700C:p.N900N	exonic	ENSG00000186716	NA	synonymous SNV	ENSG00000186716:ENST00000305877:exon13:c.T2700C:p.N900N,ENSG00000186716:ENST00000359540:exon13:c.T2700C:p.N900N	Score=486;Name=lod=126	NA	22q11.23	NA	NA	NA	NA	rs2227939	0.31	0.31	0.314	0.322684	0.2982	0.0754	0.3242	0.5461	0.2996	0.3	0.08	0.31	0.57	0.2964	0.57	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	0.797	8.196	2.7	0.703	0.565	5.543	0.797066	NA	NA	0.295233	0.512483	NA	0.304	NA	7.7768336
874	1	24406535	24406535	G	A	exonic	MYOM3	NA	nonsynonymous SNV	MYOM3:NM_152372:exon20:c.C2557T:p.P853S	exonic	ENSG00000142661	NA	nonsynonymous SNV	ENSG00000142661:ENST00000329601:exon20:c.C2557T:p.P853S,ENSG00000142661:ENST00000330966:exon20:c.C2560T:p.P854S,ENSG00000142661:ENST00000374434:exon20:c.C2557T:p.P853S	NA	NA	1p36.11	Score=900;Name=V$SREBP1_02	NA	NA	NA	rs35446243	0.11	0.11	0.088	0.0888578	0.1859	0.002	0.2363	0.0091	0.0818	0.18	0.0035	0.24	0.02	0.1715	0.24	0.45	T	0.023	B	0.012	B	0.094	N	1.000	P	-0.03	N	0.66	T	-1.013	T	0.000	T	0.027	0.729	7.875	1.21	0.691	0.246	1.576	0.72906	NA	0.15	0.199157	0.041071	NA	0.058	NA	7.7767764
874	6	32629936	32629936	C	T	exonic	HLA-DQB1	NA	nonsynonymous SNV	HLA-DQB1:NM_001243961:exon3:c.G469A:p.G157S,HLA-DQB1:NM_002123:exon3:c.G469A:p.G157S	exonic	ENSG00000179344	NA	nonsynonymous SNV	ENSG00000179344:ENST00000399082:exon2:c.G199A:p.G67S,ENSG00000179344:ENST00000374943:exon3:c.G469A:p.G157S,ENSG00000179344:ENST00000399079:exon3:c.G469A:p.G157S,ENSG00000179344:ENST00000434651:exon3:c.G469A:p.G157S,ENSG00000179344:ENST00000399084:exon4:c.G469A:p.G157S	NA	NA	6p21.32	NA	NA	NA	NA	rs1049107	0.21	0.21	0.233	0.209265	0.1958	0.2431	0.1484	0.2216	0.2147	0.23	0.16	0.19	0.24	0.1858	0.24	0.01	D	0.007	B	0.084	B	0.675	N	1.000	P	0.02	N	4.18	T	-0.892	T	0.002	T	0.23	0.335	5.815	-1.24	-0.179	-0.490	6.026	0.334684	NA	0.16	0.175089	0.208561	NA	0.203	NA	7.7766444
874	12	52681925	52681925	A	C	exonic	KRT81	NA	nonsynonymous SNV	KRT81:NM_002281:exon5:c.T743G:p.L248R	exonic	ENSG00000205426	NA	nonsynonymous SNV	ENSG00000205426:ENST00000327741:exon5:c.T743G:p.L248R	NA	NA	12q13.13	NA	Name=Pol2	Name=2	NA	rs6580873	0.92	0.92	0.926	0.936102	0.8519	0.996	0.9207	0.9887	0.9008	0.85	1	0.88	0.98	0.8753	1	1	T	0.0	B	0.0	B	0.002	N	0.003	P	.	.	-1.05	T	-0.926	T	0.000	T	0.054	-2.119	0.006	2.73	0.406	-0.476	3.376	-2.118797	NA	0.99	0.829535	0.971403	NA	0.978	NA	7.7765984
874	19	1047161	1047161	A	G	exonic	ABCA7	NA	synonymous SNV	ABCA7:NM_019112:exon15:c.A1851G:p.G617G	exonic	ENSG00000064687	NA	synonymous SNV	ENSG00000064687:ENST00000435683:exon9:c.A1437G:p.G479G,ENSG00000064687:ENST00000433129:exon14:c.A1851G:p.G617G,ENSG00000064687:ENST00000263094:exon15:c.A1851G:p.G617G	Score=501;Name=lod=145	NA	19p13.3	Score=680;Name=V$BRACH_01	Name=PAX5-C20	Name=8	NA	rs3752237	0.68	0.68	0.634	0.695288	0.6004	0.8056	0.7695	0.6089	0.7434	0.61	0.84	0.75	0.56	0.6784	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.113166	NA	NA	0.612366	0.646979	NA	0.587	NA	7.7755006
875	15	90892293	90892293	C	T	ncRNA_exonic	GABARAPL3	NA	NA	NA	exonic	ENSG00000238244	NA	nonsynonymous SNV	ENSG00000238244:ENST00000412799:exon1:c.G137A:p.R46K	Score=681;Name=lod=778	NA	15q26.1	NA	NA	NA	NA	rs2589973	0.54	0.54	0.516	0.578275	0.2922	0.7877	0.5706	0.6573	0.5552	0.29	0.78	0.51	0.65	0.4332	0.78	1	T	.	.	.	.	.	.	1.000	P	.	.	1.33	T	-0.954	T	0.000	T	0.041	-0.452	1.906	1.43	0.026	2.321	4.88	-0.452008	NA	1	NA	NA	ID=COSM1517858;OCCURENCE=1(lung)	0.536	NA	7.7746
875	17	39742856	39742856	G	A	exonic	KRT14	NA	synonymous SNV	KRT14:NM_000526:exon1:c.C231T:p.S77S	exonic	ENSG00000186847	NA	synonymous SNV	ENSG00000186847:ENST00000167586:exon1:c.C231T:p.S77S	Score=428;Name=lod=73	NA	17q21.2	NA	NA	Name=2	NA	rs6503639	0.18	0.18	0.17	0.152356	0.3012	NA	0.2003	0.1528	0.1217	0.31	NA	0.21	0.18	0.2558	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.124098	NA	NA	0.335349	0.165985	NA	0.145	CLINSIG=untested;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000056700.1;CLNDSDB=.;CLNDSDBID=.	7.7743176
875	16	11981487	11981487	G	A	exonic	GSPT1	NA	synonymous SNV	GSPT1:NM_001130006:exon7:c.C894T:p.G298G,GSPT1:NM_001130007:exon7:c.C483T:p.G161G,GSPT1:NM_002094:exon7:c.C897T:p.G299G	exonic	ENSG00000103342	NA	synonymous SNV	ENSG00000103342:ENST00000563468:exon5:c.C483T:p.G161G,ENSG00000103342:ENST00000420576:exon7:c.C483T:p.G161G,ENSG00000103342:ENST00000434724:exon7:c.C897T:p.G299G,ENSG00000103342:ENST00000439887:exon7:c.C894T:p.G298G,ENSG00000103342:ENST00000568849:exon7:c.C576T:p.G192G	Score=649;Name=lod=581	NA	16p13.13	Score=886;Name=V$FOXJ2_02	NA	NA	Score=109;Name=877760_0_-_109	rs3752426	0.16	0.16	0.14	0.120008	0.3211	0.0109	0.2075	0.0257	0.091	0.33	0.01	0.23	0.03	0.2333	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.323604	1.323604	NA	0.338762	0.076275	NA	0.21	NA	7.7735046
875	14	23299135	23299135	G	T	exonic	MRPL52	NA	nonsynonymous SNV	MRPL52:NM_178336:exon1:c.G14T:p.G5V,MRPL52:NM_180982:exon1:c.G14T:p.G5V,MRPL52:NM_181307:exon1:c.G14T:p.G5V	exonic	ENSG00000172590	NA	nonsynonymous SNV	ENSG00000172590:ENST00000355151:exon1:c.G14T:p.G5V,ENSG00000172590:ENST00000397496:exon1:c.G14T:p.G5V,ENSG00000172590:ENST00000397505:exon1:c.G14T:p.G5V,ENSG00000172590:ENST00000432849:exon1:c.G14T:p.G5V,ENSG00000172590:ENST00000556465:exon1:c.G14T:p.G5V	NA	NA	14q11.2	NA	Name=TCF4,Pol2(phosphoS2),Pol2,SP1,USF1_(SC-8983),YY1_(C-20),Znf143_(16618-1-AP),TAF1,GABP,ZBTB33,POU2F2,CTCF,GTF2F1_(RAP-74),CHD2_(N-1250),ELF1_(SC-631),Max,STAT1,Oct-2,YY1,ZNF263,HDAC2_(SC-6296),Pol2-4H8,Sin3Ak-20,SIRT6,FOSL2,ELK4,USF-1,IRF1,TBP,NFKB,HEY1,c-Myc,CCNT2,GRp20,PAX5-C20	Name=148	NA	rs1135641	0.53	0.53	0.521	0.514177	0.5129	0.5516	0.3862	0.559	0.5072	0.51	0.54	0.48	0.57	0.5382	0.57	0.11	T	0.133	B	0.144	B	0.392	N	1.000	P	1.39	L	1.92	T	-0.937	T	0.000	T	0.567	2.637	14.78	-1.72	-0.184	-0.056	6.902	2.637096	2.637096	0.04	0.510816	0.526101	NA	0.457	NA	7.7714174
875	10	27303605	27303605	A	T	exonic	ANKRD26	NA	nonsynonymous SNV	ANKRD26:NM_001256053:exon31:c.T4539A:p.F1513L,ANKRD26:NM_014915:exon31:c.T4542A:p.F1514L	exonic	ENSG00000107890	NA	nonsynonymous SNV	ENSG00000107890:ENST00000376070:exon16:c.T3213A:p.F1071L,ENSG00000107890:ENST00000376087:exon31:c.T4542A:p.F1514L,ENSG00000107890:ENST00000436985:exon31:c.T4590A:p.F1530L	Score=259;Name=lod=15	NA	10p12.1	NA	NA	NA	NA	rs2274741	0.3	0.3	0.282	0.317292	0.1928	0.5506	0.1758	0.236	0.4151	0.2	0.59	0.17	0.22	0.2258	0.59	1	T	0.0	B	0.0	B	0.015	N	1.000	P	-2.225	N	4.39	T	-0.964	T	0.000	T	0.148	-0.616	1.26	1.33	-0.287	0.535	2.874	-0.616082	NA	1	0.144766	0.232577	NA	0.239	NA	7.7699674
875	7	84644500	84644500	C	T	exonic	SEMA3D	NA	synonymous SNV	SEMA3D:NM_152754:exon14:c.G1578A:p.L526L	exonic	ENSG00000153993	NA	synonymous SNV	ENSG00000153993:ENST00000284136:exon14:c.G1578A:p.L526L	Score=684;Name=lod=805	NA	7q21.11	NA	Name=CTCF,Nrf1	Name=19	NA	rs17559084	0.18	0.18	0.163	0.150759	0.3211	0.0556	0.2032	0.0318	0.1973	0.32	0.06	0.23	0.04	0.244	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.685002	NA	NA	0.332093	0.092374	NA	0.21	NA	7.7694736
875	19	37854235	37854235	G	T	exonic	HKR1	NA	nonsynonymous SNV	HKR1:NM_181786:exon6:c.G1538T:p.S513I	exonic	ENSG00000181666	NA	nonsynonymous SNV	ENSG00000181666:ENST00000541583:exon4:c.G1355T:p.S452I,ENSG00000181666:ENST00000392153:exon5:c.G1481T:p.S494I,ENSG00000181666:ENST00000589392:exon5:c.G1484T:p.S495I,ENSG00000181666:ENST00000324411:exon6:c.G1538T:p.S513I,ENSG00000181666:ENST00000544914:exon6:c.G719T:p.S240I,ENSG00000181666:ENST00000591471:exon9:c.G719T:p.S240I	NA	NA	19q13.12	NA	NA	NA	NA	rs3745765	0.31	0.31	0.291	0.347244	0.159	0.2986	0.2695	0.534	0.3937	0.16	0.33	0.3	0.53	0.2358	0.53	1	T	0.001	B	0.004	B	.	.	1.000	P	-0.445	N	2.38	T	-0.920	T	0.000	T	0.048	-2.051	0.006	1.52	0.004	-1.475	4.178	-2.050625	NA	0.66	0.170465	0.481162	NA	0.312	NA	7.7680684
875	16	69373414	69373414	T	C	exonic	COG8	NA	synonymous SNV	COG8:NM_032382:exon1:c.A42G:p.T14T	exonic	ENSG00000213380	NA	synonymous SNV	ENSG00000213380:ENST00000306875:exon1:c.A42G:p.T14T,ENSG00000213380:ENST00000562081:exon1:c.A42G:p.T14T	NA	NA	16q22.1	NA	Name=GABP,USF2,POU2F2,CTCFL_(SC-98982),SP2_(SC-643),TAF1,ETS1,YY1_(C-20),BRCA1_(C-1863),TAF7_(SQ-8),Pol2,PU.1,Oct-2,ELF1_(SC-631),STAT1,GTF2F1_(RAP-74),CTCF,ELK4,Pol2(b),KAP1,Pol2-4H8,HA-E2F1,Sin3Ak-20,YY1,NANOG_(SC-33759),CTCF_(SC-5916),RFX5_(N-494),HEY1,NFKB,TBP	Name=148	NA	rs11542583	0.23	0.23	0.219	0.257588	0.2853	0.0833	0.2161	0.3192	0.3548	0.27	0.09	0.24	0.32	0.2968	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.958061	NA	NA	0.316737	0.33946	NA	0.341	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000082299.1;CLNDSDB=.;CLNDSDBID=.	7.7678296
875	11	120998942	120998942	C	T	exonic	TECTA	NA	synonymous SNV	TECTA:NM_005422:exon8:c.C2256T:p.I752I	exonic	ENSG00000109927	NA	synonymous SNV	ENSG00000109927:ENST00000264037:exon8:c.C2256T:p.I752I,ENSG00000109927:ENST00000392793:exon9:c.C2256T:p.I752I	Score=492;Name=lod=133	NA	11q23.3	Score=914;Name=V$FREAC7_01	NA	NA	NA	rs10502247	0.3	0.3	0.31	0.310304	0.3022	0.4355	0.2622	0.1475	0.4438	0.3	0.41	0.28	0.17	0.3087	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.170418	NA	NA	0.288672	0.196323	NA	0.188	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000038484.1;CLNDSDB=.;CLNDSDBID=.	7.7670946
875	17	33768354	33768354	C	T	exonic	SLFN13	NA	nonsynonymous SNV	SLFN13:NM_144682:exon6:c.G1954A:p.E652K	exonic	ENSG00000154760	NA	nonsynonymous SNV	ENSG00000154760:ENST00000533791:exon4:c.G1954A:p.E652K,ENSG00000154760:ENST00000360502:exon5:c.G1000A:p.E334K,ENSG00000154760:ENST00000285013:exon6:c.G1954A:p.E652K,ENSG00000154760:ENST00000542635:exon6:c.G1954A:p.E652K,ENSG00000154760:ENST00000526861:exon7:c.G1954A:p.E652K,ENSG00000154760:ENST00000534689:exon7:c.G1000A:p.E334K	NA	NA	17q12	NA	NA	NA	NA	rs3744371	0.57	0.57	0.578	0.648962	0.5159	0.6508	0.4697	0.8684	0.6145	0.44	0.63	0.46	0.78	0.5536	0.78	1	T	0.0	B	0.0	B	0.003	N	1.000	P	-1.98	N	-2.35	D	-0.955	T	0.000	T	0.11	-1.152	0.101	0.733	-0.330	0.960	6.430	-1.15203	NA	1	0.49697	0.746891	NA	0.681	NA	7.7668634
875	11	43940644	43940644	G	T	exonic	ALKBH3	NA	synonymous SNV	ALKBH3:NM_139178:exon9:c.G726T:p.G242G	exonic	ENSG00000166199	NA	synonymous SNV	ENSG00000166199:ENST00000302708:exon9:c.G726T:p.G242G	Score=525;Name=lod=182	NA	11p11.2	Score=877;Name=V$SREBP1_01	NA	NA	NA	rs1048928	0.62	0.62	0.58	0.616214	0.6243	0.8373	0.6542	0.2958	0.7863	0.63	0.85	0.65	0.29	0.6514	0.85	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.049	T	0.000	T	.	1.219	9.945	2.83	0.837	0.148	7.435	1.218599	NA	NA	0.624186	0.362233	NA	0.609	NA	7.7667806
875	9	134406071	134406071	C	G	exonic	UCK1	NA	nonsynonymous SNV	UCK1:NM_001261451:exon2:c.G85C:p.E29Q	exonic	ENSG00000130717	NA	nonsynonymous SNV	ENSG00000130717:ENST00000372211:exon2:c.G85C:p.E29Q,ENSG00000130717:ENST00000491309:exon2:c.G112C:p.E38Q	NA	NA	9q34.13	NA	Name=ZBTB7A_(SC-34508),CTCFL_(SC-98982),E2F6_(H-50),CTCF	Name=75	NA	rs7867616	0.85	0.85	0.86	0.86222	0.838	0.999	0.8905	0.6785	0.9744	0.84	1	0.87	0.69	0.8662	1	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-1.007	T	0.000	T	0.123	1.029	9.202	2.57	0.432	0.335	8.773	1.028618	NA	0.01	0.862674	0.711757	NA	0.819	NA	7.7664594
875	17	38991003	38991003	T	C	exonic	TMEM99	NA	nonsynonymous SNV	TMEM99:NM_001195386:exon3:c.T235C:p.Y79H,TMEM99:NM_001195387:exon3:c.T235C:p.Y79H,TMEM99:NM_145274:exon3:c.T235C:p.Y79H	exonic	ENSG00000167920	NA	nonsynonymous SNV	ENSG00000167920:ENST00000301665:exon3:c.T235C:p.Y79H,ENSG00000167920:ENST00000436612:exon3:c.T235C:p.Y79H	NA	NA	17q21.2	NA	NA	NA	NA	rs10558	0.3	0.3	0.304	0.33746	0.1839	0.4077	0.1499	0.4758	0.3691	0.18	0.4	0.17	0.45	0.2191	0.45	0	D	0.138	B	0.03	B	.	.	1.000	P	0	N	1.5	T	-0.926	T	0.000	T	0.344	-0.444	1.938	-0.47	-0.905	-1.878	.	-0.444291	NA	NA	0.164405	0.422956	NA	0.355	NA	7.7659284
875	19	43243217	43243217	A	G	exonic	PSG3	NA	nonsynonymous SNV	PSG3:NM_021016:exon2:c.T89C:p.L30S	exonic	ENSG00000221826	NA	nonsynonymous SNV	ENSG00000221826:ENST00000327495:exon2:c.T89C:p.L30S,ENSG00000221826:ENST00000595140:exon2:c.T89C:p.L30S	NA	NA	19q13.2	NA	NA	NA	NA	rs12185496	0.5	0.5	0.493	0.65655	0.5507	0.4772	0.6571	0.8903	0.6339	0.45	0.37	0.55	0.7	0.5894	0.78	0.2	T	0.001	B	0.009	B	.	.	1.000	P	1.935	M	2.08	T	-1.035	T	0.000	T	0.04	-0.191	3.073	-1.17	-0.710	-2.830	5.790	-0.190683	NA	0.37	0.427907	0.780427	NA	NA	NA	7.7653264
876	19	51738917	51738917	G	A	exonic	CD33	NA	nonsynonymous SNV	CD33:NM_001082618:exon5:c.G529A:p.G177R,CD33:NM_001177608:exon6:c.G910A:p.G304R,CD33:NM_001772:exon6:c.G910A:p.G304R	exonic	ENSG00000105383	NA	nonsynonymous SNV	ENSG00000105383:ENST00000421133:exon5:c.G529A:p.G177R,ENSG00000105383:ENST00000436584:exon5:c.G529A:p.G177R,ENSG00000105383:ENST00000262262:exon6:c.G910A:p.G304R,ENSG00000105383:ENST00000391796:exon6:c.G910A:p.G304R	NA	NA	19q13.41	NA	NA	NA	NA	rs35112940	0.1	0.1	0.082	0.0712859	0.2117	NA	0.1095	0.025	0.0358	0.22	NA	0.13	0.03	0.1603	0.22	0.64	T	0.142	B	0.046	B	.	.	1.000	P	1.69	L	2.28	T	-1.022	T	0.000	T	0.148	0.899	8.653	0.282	0.154	-1.610	3.458	0.898675	NA	0.21	0.19814	0.054244	NA	0.101	NA	7.7631934
876	6	31079889	31079889	C	G	exonic	C6orf15	NA	nonsynonymous SNV	C6orf15:NM_014070:exon2:c.G247C:p.A83P	exonic	ENSG00000204542	NA	nonsynonymous SNV	ENSG00000204542:ENST00000259870:exon2:c.G247C:p.A83P	NA	NA	6p21.33	NA	NA	NA	NA	rs1265053	0.52	0.52	0.494	0.529752	0.5119	0.4861	0.562	0.5469	0.547	0.5	0.47	0.57	0.56	0.5338	0.57	1	T	0.0	B	0.0	B	0.582	N	1.000	P	-2.075	N	3.62	T	-0.935	T	0.001	T	0.029	-1.301	0.037	2.79	0.181	1.057	8.024	-1.301149	NA	1	0.524767	0.552429	NA	0.565	NA	7.7628664
876	3	187419816	187419816	T	C	exonic	RTP2	NA	nonsynonymous SNV	RTP2:NM_001004312:exon1:c.A101G:p.N34S	exonic	ENSG00000198471	NA	nonsynonymous SNV	ENSG00000198471:ENST00000358241:exon1:c.A101G:p.N34S	Score=435;Name=lod=78	NA	3q27.3	NA	NA	NA	NA	rs61754877	0.15	0.15	0.145	0.170128	0.1938	0.1409	0.1009	0.1581	0.2413	0.2	0.11	0.1	0.15	0.1823	0.2	0.23	T	0.001	B	0.006	B	0.069	N	0.998	P	0.86	L	2.38	T	-0.975	T	0.000	T	0.039	1.654	11.49	0.746	0.126	0.691	4.205	1.65411	1.65411	0.19	0.195233	0.150704	NA	0.109	NA	7.7620004
876	3	170715830	170715830	G	A	exonic	SLC2A2	NA	synonymous SNV	SLC2A2:NM_000340:exon11:c.C1437T:p.F479F	exonic	ENSG00000163581	NA	synonymous SNV	ENSG00000163581:ENST00000382808:exon10:c.C1080T:p.F360F,ENSG00000163581:ENST00000314251:exon11:c.C1437T:p.F479F	NA	NA	3q26.2	NA	Name=HNF4G_(SC-6558),MafK_(ab50322),FOXA2_(SC-6554),ELF1_(SC-631),FOXA1_(SC-101058),RXRA,p300,FOXA1_(C-20),HNF4A_(H-171),HDAC2_(SC-6296),HNF4A,TCF4	Name=98	NA	rs5398	0.36	0.36	0.369	0.372604	0.2903	0.2411	0.3084	0.6354	0.2832	0.29	0.24	0.33	0.61	0.3159	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.489797	NA	NA	0.298488	0.587608	NA	0.435	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118386.2;CLNDSDB=.;CLNDSDBID=.	7.7619786
876	3	57138419	57138419	G	A	exonic	IL17RD	NA	nonsynonymous SNV	IL17RD:NM_017563:exon8:c.C764T:p.T255M	exonic	ENSG00000144730	NA	nonsynonymous SNV	ENSG00000144730:ENST00000296318:exon8:c.C764T:p.T255M,ENSG00000144730:ENST00000427856:exon8:c.C692T:p.T231M,ENSG00000144730:ENST00000463523:exon8:c.C332T:p.T111M,ENSG00000144730:ENST00000320057:exon9:c.C332T:p.T111M	Score=583;Name=lod=311	NA	3p14.3	Score=772;Name=V$HEN1_02	NA	NA	NA	rs6780995	0.5	0.5	0.479	0.530152	0.7147	0.1369	0.5216	0.5741	0.6922	0.72	0.12	0.6	0.53	0.649	0.72	0.11	T	0.943	P	0.302	B	0.088	N	0.790	P	0.695	N	2.9	T	-1.079	T	0.000	T	0.101	1.995	12.63	-0.521	-0.011	0.831	10.944	1.995041	1.995041	0.02	0.707791	0.584657	NA	0.638	NA	7.7618424
876	11	48238549	48238549	G	A	exonic	OR4B1	NA	nonsynonymous SNV	OR4B1:NM_001005470:exon1:c.G188A:p.C63Y	exonic	ENSG00000175619	NA	nonsynonymous SNV	ENSG00000175619:ENST00000309562:exon1:c.G188A:p.C63Y	NA	NA	11p11.2	NA	NA	NA	NA	rs11606506	0.22	0.22	0.2	0.274161	0.174	0.3869	0.1916	0.171	0.4591	0.18	0.34	0.19	0.18	0.2206	0.34	1	T	0.0	B	0.0	B	0.838	N	1.000	P	-1.585	N	4.1	T	-0.945	T	0.000	T	0.037	-2.547	0.003	0.102	-0.569	1.481	2.065	-2.546631	NA	1	0.177059	0.174693	NA	0.217	NA	7.7616744
876	2	219562675	219562675	G	A	exonic	STK36	NA	nonsynonymous SNV	STK36:NM_001243313:exon25:c.G2945A:p.G982D,STK36:NM_015690:exon25:c.G3008A:p.G1003D	exonic	ENSG00000163482	NA	nonsynonymous SNV	ENSG00000163482:ENST00000295709:exon25:c.G3008A:p.G1003D,ENSG00000163482:ENST00000392105:exon25:c.G2945A:p.G982D,ENSG00000163482:ENST00000392106:exon25:c.G2945A:p.G982D,ENSG00000163482:ENST00000440309:exon25:c.G3008A:p.G1003D	NA	NA	2q35	NA	NA	NA	NA	rs1863704	0.21	0.21	0.202	0.189696	0.3757	0.0556	0.3285	0.0212	0.2658	0.37	0.06	0.31	0.05	0.3146	0.38	0.25	T	0.673	P	0.225	B	0.602	N	1.000	P	0.55	N	-0.4	T	-0.910	T	0.000	T	0.438	-1.039	0.208	2.01	0.122	0.823	6.851	-1.039006	NA	0.62	0.38186	0.07626	ID=COSM1565079;OCCURENCE=1(large_intestine)	0.312	NA	7.7611734
876	1	200143281	200143281	C	T	exonic	NR5A2	NA	synonymous SNV	NR5A2:NM_001276464:exon7:c.C1353T:p.N451N,NR5A2:NM_003822:exon7:c.C1431T:p.N477N,NR5A2:NM_205860:exon8:c.C1569T:p.N523N	exonic	ENSG00000116833	NA	synonymous SNV	ENSG00000116833:ENST00000236914:exon7:c.C1431T:p.N477N,ENSG00000116833:ENST00000544748:exon7:c.C1353T:p.N451N,ENSG00000116833:ENST00000367362:exon8:c.C1569T:p.N523N	Score=634;Name=lod=501	NA	1q32.1	Score=821;Name=V$ARNT_02	Name=NRSF	NA	NA	rs1060060	0.37	0.37	0.39	0.354433	0.2913	0.5179	0.3213	0.3669	0.2577	0.3	0.51	0.31	0.37	0.3212	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.476888	NA	NA	0.293256	0.340218	NA	0.478	NA	7.7609106
876	7	77256713	77256713	A	G	exonic	PTPN12	NA	nonsynonymous SNV	PTPN12:NM_001131009:exon12:c.A1327G:p.T443A,PTPN12:NM_001131008:exon13:c.A1360G:p.T454A,PTPN12:NM_002835:exon13:c.A1717G:p.T573A	exonic	ENSG00000127947	NA	nonsynonymous SNV	ENSG00000127947:ENST00000407343:exon1:c.A241G:p.T81A,ENSG00000127947:ENST00000435495:exon12:c.A1327G:p.T443A,ENSG00000127947:ENST00000248594:exon13:c.A1717G:p.T573A,ENSG00000127947:ENST00000415482:exon13:c.A1360G:p.T454A	NA	NA	7q11.23	NA	NA	Name=26	NA	rs3750050	0.34	0.34	0.334	0.365016	0.16	0.6905	0.4366	0.2171	0.3896	0.16	0.68	0.41	0.19	0.2612	0.68	0.59	T	0.001	B	0.002	B	0.028	N	1.000	P	0.885	L	1.05	T	-0.946	T	0.000	T	0.118	0.005	4.04	-0.387	-0.319	-0.275	1.038	0.005088	NA	0.12	0.151512	0.215388	NA	0.348	NA	7.7606214
876	22	45255637	45255637	G	C	exonic	ARHGAP8,PRR5-ARHGAP8	NA	nonsynonymous SNV	ARHGAP8:NM_181335:exon11:c.G904C:p.G302R,ARHGAP8:NM_001017526:exon12:c.G997C:p.G333R,PRR5-ARHGAP8:NM_181334:exon14:c.G1270C:p.G424R	exonic	ENSG00000241484,ENSG00000248405	NA	nonsynonymous SNV	ENSG00000241484:ENST00000356099:exon11:c.G904C:p.G302R,ENSG00000241484:ENST00000389774:exon12:c.G997C:p.G333R,ENSG00000248405:ENST00000361473:exon14:c.G1297C:p.G433R,ENSG00000241484:ENST00000389773:exon14:c.G1270C:p.G424R,ENSG00000248405:ENST00000352766:exon16:c.G1534C:p.G512R,ENSG00000241484:ENST00000517296:exon16:c.G1534C:p.G512R	NA	NA	22q13.31	NA	NA	NA	NA	rs6007344	0.27	0.27	0.284	0.26857	0.1899	0.4048	0.1297	0.3207	0.2372	0.19	0.45	0.16	0.28	0.2093	0.45	0.4	T	0.0	B	0.001	B	0.943	N	1.000	P	-0.765	N	2.25	T	-0.912	T	0.000	T	0.652	-1.573	0.014	-2.67	-0.532	-0.388	1.860	-1.57323	NA	0.43	0.173605	0.300045	NA	0.297	NA	7.7605284
876	7	6026775	6026775	T	C	exonic	PMS2	NA	nonsynonymous SNV	PMS2:NM_000535:exon11:c.A1621G:p.K541E	exonic	ENSG00000122512	NA	nonsynonymous SNV	ENSG00000122512:ENST00000441476:exon8:c.A1303G:p.K435E,ENSG00000122512:ENST00000265849:exon11:c.A1621G:p.K541E,ENSG00000122512:ENST00000406569:exon11:c.A1621G:p.K541E	NA	NA	7p22.1	NA	NA	NA	NA	rs2228006	0.88	0.88	0.892	0.883187	0.8767	0.878	0.7738	0.9418	0.8937	0.88	0.91	0.75	0.92	0.8514	0.92	1	T	0.0	B	0.0	B	0.497	N	0.910	P	-1.445	N	1.0	T	-0.949	T	0.000	T	0.353	-0.097	3.524	4.66	0.737	1.443	10.569	-0.097243	NA	0.58	0.845742	0.918483	NA	0.913	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=Lynch_syndrome|not_provided;CLNREVSTAT=exp|mult;CLNACC=RCV000030365.2|RCV000034619.2;CLNDSDB=GeneReviews:MedGen:SNOMED_CT|.;CLNDSDBID=NBK1211:C0009405:315058005|.	7.7594914
876	16	2140680	2140680	T	C	exonic	PKD1	NA	nonsynonymous SNV	PKD1:NM_000296:exon44:c.A12130G:p.I4044V,PKD1:NM_001009944:exon44:c.A12133G:p.I4045V	exonic	ENSG00000008710	NA	nonsynonymous SNV	ENSG00000008710:ENST00000262304:exon44:c.A12133G:p.I4045V,ENSG00000008710:ENST00000423118:exon44:c.A12130G:p.I4044V	NA	NA	16p13.3	Score=942;Name=V$GATA2_01	NA	NA	NA	rs10960	0.24	0.24	0.228	0.251997	0.1968	NA	0.2046	0.6346	0.0849	0.19	NA	0.22	0.6	0.1909	0.6	0.5	T	0.002	B	0.004	B	0.048	N	1.000	P	-0.69	N	-0.37	T	-0.936	T	0.000	T	0.022	-1.66	0.012	-1.55	-0.387	-0.085	0.963	-1.659587	NA	0.42	0.186671	0.555861	NA	0.21	NA	7.7589624
876	20	8755243	8755243	T	C	exonic	PLCB1	NA	synonymous SNV	PLCB1:NM_015192:exon27:c.T2988C:p.A996A,PLCB1:NM_182734:exon27:c.T2988C:p.A996A	exonic	ENSG00000182621	NA	synonymous SNV	ENSG00000182621:ENST00000338037:exon27:c.T2988C:p.A996A,ENSG00000182621:ENST00000378637:exon27:c.T2988C:p.A996A,ENSG00000182621:ENST00000378641:exon27:c.T2988C:p.A996A	Score=477;Name=lod=116	NA	20p12.3	NA	Name=CEBPB	Name=11	NA	rs2235613	0.57	0.57	0.58	0.613219	0.6481	0.4613	0.4986	0.6362	0.7843	0.62	0.45	0.58	0.62	0.6155	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.487787	1.487787	NA	0.644535	0.631866	ID=COSM1130575,COSM1130576;OCCURENCE=1(prostate)	0.638	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117930.1;CLNDSDB=.;CLNDSDBID=.	7.7585316
876	12	85277561	85277561	T	A	exonic	SLC6A15	NA	nonsynonymous SNV	SLC6A15:NM_018057:exon5:c.A833T:p.D278V	exonic	ENSG00000072041	NA	nonsynonymous SNV	ENSG00000072041:ENST00000450363:exon5:c.A833T:p.D278V	NA	NA	12q21.31	NA	NA	NA	NA	rs17183577	0.11	0.11	0.101	0.0746805	0.2266	NA	0.1599	0.0053	0.0286	0.23	NA	0.16	0.0041	0.1405	0.23	0	D	0.0	B	0.0	B	.	.	1.000	P	.	.	-0.33	T	-1.065	T	0.000	T	0.054	0.706	7.764	-0.422	-0.439	0.510	1.264	0.705915	NA	0.05	0.207907	0.04335	NA	0.051	NA	7.7583264
876	4	123192383	123192383	T	C	exonic	KIAA1109	NA	synonymous SNV	KIAA1109:NM_015312:exon45:c.T7704C:p.D2568D	exonic	ENSG00000138688	NA	synonymous SNV	ENSG00000138688:ENST00000388738:exon45:c.T7704C:p.D2568D,ENSG00000138688:ENST00000455637:exon45:c.T7704C:p.D2568D,ENSG00000138688:ENST00000264501:exon47:c.T7704C:p.D2568D	Score=685;Name=lod=809	NA	4q27	NA	NA	NA	NA	rs45574236	0.26	0.26	0.229	0.273363	0.2913	0.3611	0.3026	0.0333	0.4683	0.3	0.35	0.3	0.04	0.3137	0.35	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.977	T	0.000	T	.	0.626	7.365	0.618	0.109	1.125	10.850	0.625574	NA	NA	0.303584	0.080115	ID=COSM1131284;OCCURENCE=1(prostate)	0.188	NA	7.7580826
876	17	3657159	3657159	C	T	exonic	ITGAE	NA	nonsynonymous SNV	ITGAE:NM_002208:exon13:c.G1445A:p.R482Q	exonic	ENSG00000083457	NA	nonsynonymous SNV	ENSG00000083457:ENST00000263087:exon13:c.G1445A:p.R482Q	NA	NA	17p13.2	NA	NA	NA	NA	rs2272606	0.58	0.58	0.612	0.554313	0.7515	0.2341	0.5245	0.7685	0.4131	0.75	0.22	0.58	0.75	0.6073	0.75	0	D	0.783	P	0.058	B	.	.	1.000	P	2.23	M	1.04	T	-0.975	T	0.000	T	0.107	1.215	9.93	0.437	0.033	-0.221	7.430	1.214581	NA	0.02	0.717093	0.741716	NA	0.58	NA	7.7574404
876	2	219508372	219508372	A	T	exonic	ZNF142	NA	nonsynonymous SNV	ZNF142:NM_001105537:exon8:c.T2867A:p.L956H	exonic	ENSG00000115568	NA	nonsynonymous SNV	ENSG00000115568:ENST00000411696:exon7:c.T2867A:p.L956H,ENSG00000115568:ENST00000449707:exon8:c.T2867A:p.L956H	NA	NA	2q35	NA	NA	NA	NA	rs3770213	0.21	0.21	0.187	0.191494	0.3757	0.0556	0.3271	0.028	0.2669	0.37	0.06	0.31	0.05	0.3206	0.38	0.54	T	0.979	D	0.533	P	0.010	N	1.000	P	0.805	L	2.53	T	-0.962	T	0.000	T	0.077	2.96	15.87	-1.58	-0.052	0.104	5.506	2.960372	2.960372	0	0.379888	0.079213	NA	0.319	NA	7.7571454
876	8	143833856	143833856	C	T	exonic	LYPD2	NA	nonsynonymous SNV	LYPD2:NM_205545:exon1:c.G14A:p.R5Q	exonic	ENSG00000197353	NA	nonsynonymous SNV	ENSG00000197353:ENST00000359228:exon1:c.G14A:p.R5Q	NA	NA	8q24.3	NA	NA	NA	NA	rs11778314	0.23	0.23	0.219	0.234625	0.1899	0.4038	0.1585	0.149	0.2761	0.2	0.39	0.16	0.14	0.2082	0.39	0.12	T	0.01	B	0.001	B	0.746	N	1.000	P	1.87	L	-0.77	T	-1.008	T	0.000	T	0.047	1.418	10.68	-2.4	-0.285	-0.279	5.400	1.417549	1.417549	0.4	0.179153	0.158791	ID=COSM1455272;OCCURENCE=1(large_intestine)	0.188	NA	7.7560804
877	20	57768743	57768743	C	T	exonic	ZNF831	NA	nonsynonymous SNV	ZNF831:NM_178457:exon1:c.C2669T:p.A890V	exonic	ENSG00000124203	NA	nonsynonymous SNV	ENSG00000124203:ENST00000371030:exon1:c.C2669T:p.A890V	NA	NA	20q13.32	NA	NA	NA	NA	rs56057707	0.18	0.18	0.146	0.175919	0.1899	0.2728	0.2378	0.0802	0.1472	0.21	0.21	0.22	0.09	0.2036	0.22	1	T	0.003	B	0.002	B	0.145	N	1.000	P	0.345	N	3.58	T	-0.922	T	0.000	T	0.043	0.642	7.45	2.79	0.210	-0.376	11.476	0.642402	NA	0.35	0.185323	0.08435	NA	0.065	NA	7.7545104
877	14	104165753	104165753	G	A	exonic	XRCC3	NA	nonsynonymous SNV	XRCC3:NM_001100118:exon7:c.C722T:p.T241M,XRCC3:NM_001100119:exon8:c.C722T:p.T241M,XRCC3:NM_005432:exon8:c.C722T:p.T241M	exonic	ENSG00000126215	NA	nonsynonymous SNV	ENSG00000126215:ENST00000554974:exon2:c.C107T:p.T36M,ENSG00000126215:ENST00000553264:exon6:c.C722T:p.T241M,ENSG00000126215:ENST00000352127:exon7:c.C722T:p.T241M,ENSG00000126215:ENST00000445556:exon7:c.C722T:p.T241M,ENSG00000126215:ENST00000554913:exon8:c.C722T:p.T241M,ENSG00000126215:ENST00000555055:exon8:c.C722T:p.T241M	NA	NA	14q32.33	NA	NA	NA	NA	rs861539	0.25	0.25	0.263	0.216853	0.3936	0.0734	0.2291	0.1906	0.2096	0.4	0.09	0.27	0.19	0.3075	0.4	0.33	T	0.541	P	0.19	B	0.122	N	1.000	P	1.155	L	1.05	T	-0.912	T	0.000	T	0.113	1.59	11.27	1.35	0.376	0.642	12.316	1.589788	1.589788	0.18	0.378227	0.215811	ID=COSM1128325;OCCURENCE=1(prostate)	0.319	CLINSIG=other;CLNDBN=Cutaneous_malignant_melanoma_6;CLNREVSTAT=single;CLNACC=RCV000009500.1;CLNDSDB=MedGen:OMIM:Orphanet;CLNDSDBID=C3151417:613972:ORPHA618	7.7540064
877	18	65179829	65179829	G	A	exonic	DSEL	NA	nonsynonymous SNV	DSEL:NM_032160:exon2:c.C2047T:p.P683S	exonic	ENSG00000171451	NA	nonsynonymous SNV	ENSG00000171451:ENST00000310045:exon2:c.C2047T:p.P683S	NA	NA	18q22.1	NA	NA	NA	NA	rs2279269	0.47	0.47	0.458	0.435503	0.5686	0.498	0.4294	0.3041	0.4162	0.57	0.51	0.46	0.27	0.4941	0.57	1	T	0.0	B	0.0	B	0.033	N	1.000	P	-1.355	N	2.45	T	-0.930	T	0.000	T	0.018	0.394	6.141	2.92	0.905	1.602	1.172	0.394297	NA	0.76	0.516744	0.323877	NA	0.362	NA	7.7538894
877	11	130784616	130784616	T	C	exonic	SNX19	NA	nonsynonymous SNV	SNX19:NM_014758:exon1:c.A1219G:p.S407G	exonic	ENSG00000120451	NA	nonsynonymous SNV	ENSG00000120451:ENST00000265909:exon1:c.A1219G:p.S407G,ENSG00000120451:ENST00000533214:exon1:c.A1219G:p.S407G	NA	NA	11q24.3	NA	NA	NA	NA	rs3190345	0.14	0.14	0.135	0.127596	0.1988	0.1538	0.0893	0.0492	0.1605	0.2	0.17	0.1	0.05	0.1747	0.21	1	T	0.0	B	0.0	B	0.874	N	1.000	P	-0.975	N	2.44	T	-0.948	T	0.000	T	0.025	-1.423	0.021	2.97	0.208	0.546	4.965	-1.42284	NA	1	0.207819	0.071558	NA	0.21	NA	7.7520144
877	19	44981375	44981375	T	C	exonic	ZNF180	NA	synonymous SNV	ZNF180:NM_013256:exon5:c.A1323G:p.Q441Q	exonic	ENSG00000167384	NA	synonymous SNV	ENSG00000167384:ENST00000391956:exon4:c.A1248G:p.Q416Q,ENSG00000167384:ENST00000221327:exon5:c.A1323G:p.Q441Q,ENSG00000167384:ENST00000592529:exon5:c.A1242G:p.Q414Q	NA	NA	19q13.31	Score=914;Name=V$CEBP_01	Name=KAP1,ZNF274,SETDB1	Name=69	NA	rs954314	0.18	0.18	0.168	0.160543	0.338	0.002	0.1729	0.1513	0.1452	0.35	0.0017	0.18	0.13	0.2555	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.218109	NA	NA	0.322791	0.197912	ID=COSM1394471;OCCURENCE=1(large_intestine)	0.254	NA	7.7503756
877	2	74690039	74690039	G	A	exonic	MOGS	NA	nonsynonymous SNV	MOGS:NM_006302:exon4:c.C877T:p.P293S,MOGS:NM_001146158:exon5:c.C559T:p.P187S	exonic	ENSG00000115275	NA	nonsynonymous SNV	ENSG00000115275:ENST00000233616:exon4:c.C877T:p.P293S,ENSG00000115275:ENST00000448666:exon5:c.C559T:p.P187S,ENSG00000115275:ENST00000452063:exon5:c.C559T:p.P187S	NA	NA	2p13.1	NA	NA	NA	NA	rs2268416	0.5	0.5	0.542	0.538738	0.159	0.8214	0.3242	0.8714	0.3405	0.15	0.82	0.27	0.85	0.2792	0.85	0.95	T	0.0	B	0.0	B	0.062	N	0.000	P	-0.975	N	1.28	T	-0.985	T	0.000	T	0.118	-1.939	0.007	0.945	-0.235	0.754	1.078	-1.939376	NA	1	0.144854	0.734032	NA	0.391	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000081382.1;CLNDSDB=.;CLNDSDBID=.	7.7502794
877	18	6993673	6993673	T	C	exonic	LAMA1	NA	nonsynonymous SNV	LAMA1:NM_005559:exon35:c.A4975G:p.I1659V	exonic	ENSG00000101680	NA	nonsynonymous SNV	ENSG00000101680:ENST00000389658:exon35:c.A4975G:p.I1659V	NA	NA	18p11.31	NA	NA	NA	NA	rs62081533	0.14	0.14	0.147	0.113419	0.1958	0.0903	0.1239	0.0371	0.1483	0.21	0.1	0.15	0.05	0.1665	0.22	0.25	T	0.0	B	0.003	B	0.915	N	1.000	P	0	N	3.01	T	-0.911	T	0.000	T	0.053	0.996	9.069	-3.46	-0.707	-0.037	9.401	0.996472	NA	NA	0.221279	0.072174	NA	0.167	NA	7.7497544
877	4	68447249	68447249	A	G	intronic	STAP1	NA	NA	NA	intronic	ENSG00000035720	NA	NA	NA	NA	Name=Parkinson's disease	4q13.2	Score=816;Name=V$CHX10_01	Name=NFKB	Name=13	NA	rs2242330	0.2	0.2	0.196	0.207668	0.2515	0.246	0.1441	0.1082	0.3027	0.26	0.24	0.14	0.11	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.450276	2.450276	NA	NA	NA	NA	0.246	NA	7.7485
877	6	46107752	46107752	C	G	exonic	ENPP4	NA	nonsynonymous SNV	ENPP4:NM_014936:exon2:c.C432G:p.H144Q	exonic	ENSG00000001561	NA	nonsynonymous SNV	ENSG00000001561:ENST00000321037:exon2:c.C432G:p.H144Q	Score=343;Name=lod=33	NA	6p21.1	NA	NA	NA	NA	rs7451713	0.42	0.42	0.438	0.451677	0.5348	0.4444	0.4467	0.2186	0.6922	0.54	0.41	0.49	0.22	0.5172	0.54	0.74	T	0.077	B	0.093	B	0.002	N	0.099	P	0.385	N	-0.59	T	-1.081	T	0.069	T	0.109	1.012	9.135	2.08	0.088	0.713	10.585	1.012363	NA	0.09	0.533372	0.256468	NA	0.42	NA	7.7479614
877	19	4457650	4457650	C	T	exonic	UBXN6	NA	synonymous SNV	UBXN6:NM_025241:exon1:c.G45A:p.K15K	exonic	ENSG00000167671	NA	synonymous SNV	ENSG00000167671:ENST00000301281:exon1:c.G45A:p.K15K	Score=546;Name=lod=221	NA	19p13.3	NA	Name=ZBTB7A_(SC-34508),TAF1,TAF7_(SQ-8)	Name=84	NA	rs1044510	0.41	0.41	0.355	0.40615	0.2763	0.6171	0.4294	0.3374	0.3988	0.28	0.62	0.43	0.34	0.3602	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.925682	1.925682	NA	0.283104	0.330759	NA	NA	NA	7.7470626
878	17	48452776	48452776	A	C	exonic	EME1	NA	nonsynonymous SNV	EME1:NM_001166131:exon2:c.A207C:p.E69D,EME1:NM_152463:exon2:c.A207C:p.E69D	exonic	ENSG00000154920	NA	nonsynonymous SNV	ENSG00000154920:ENST00000511648:exon1:c.A207C:p.E69D,ENSG00000154920:ENST00000338165:exon2:c.A207C:p.E69D,ENSG00000154920:ENST00000393271:exon2:c.A207C:p.E69D,ENSG00000154920:ENST00000511519:exon2:c.A207C:p.E69D,ENSG00000154920:ENST00000511711:exon2:c.A207C:p.E69D	NA	NA	17q21.33	NA	NA	NA	NA	rs3760413	0.74	0.74	0.749	0.745407	0.8777	0.244	0.8905	0.9932	0.6881	0.87	0.24	0.92	0.99	0.818	0.99	1	T	0.0	B	0.001	B	0.883	N	1.000	P	-0.255	N	2.87	T	-0.955	T	0.000	T	0.124	-1.77	0.01	-6.36	-1.189	-1.563	1.093	-1.770481	NA	0	0.894186	0.974126	NA	0.848	NA	7.7434474
878	3	49570200	49570200	C	T	exonic	DAG1	NA	synonymous SNV	DAG1:NM_001177639:exon3:c.C2256T:p.H752H,DAG1:NM_001177643:exon3:c.C2256T:p.H752H,DAG1:NM_001177644:exon3:c.C2256T:p.H752H,DAG1:NM_004393:exon3:c.C2256T:p.H752H,DAG1:NM_001177635:exon4:c.C2256T:p.H752H,DAG1:NM_001177637:exon4:c.C2256T:p.H752H,DAG1:NM_001177638:exon4:c.C2256T:p.H752H,DAG1:NM_001177640:exon4:c.C2256T:p.H752H,DAG1:NM_001177641:exon4:c.C2256T:p.H752H,DAG1:NM_001177642:exon4:c.C2256T:p.H752H,DAG1:NM_001177636:exon5:c.C2256T:p.H752H,DAG1:NM_001165928:exon6:c.C2256T:p.H752H,DAG1:NM_001177634:exon6:c.C2256T:p.H752H	exonic	ENSG00000173402	NA	synonymous SNV	ENSG00000173402:ENST00000308775:exon3:c.C2256T:p.H752H,ENSG00000173402:ENST00000515359:exon3:c.C2256T:p.H752H,ENSG00000173402:ENST00000539901:exon3:c.C2256T:p.H752H,ENSG00000173402:ENST00000538711:exon4:c.C2256T:p.H752H,ENSG00000173402:ENST00000541308:exon4:c.C2256T:p.H752H,ENSG00000173402:ENST00000545947:exon6:c.C2256T:p.H752H	Score=431;Name=lod=75	NA	3p21.31	Score=847;Name=V$GR_Q6	NA	NA	NA	rs1801143	0.25	0.25	0.239	0.215855	0.333	0.0724	0.1744	0.2693	0.2004	0.34	0.09	0.23	0.32	0.2775	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.654963	NA	NA	0.313837	0.289605	NA	0.283	CLINSIG=untested|probable-non-pathogenic;CLNDBN=not_provided|not_specified;CLNREVSTAT=not|single;CLNACC=RCV000024446.1|RCV000116863.2;CLNDSDB=.|.;CLNDSDBID=.|.	7.7423296
878	16	56396486	56396486	C	T	UTR3	AMFR	NM_001144:c.*335G>A	NA	NA	UTR3	ENSG00000159461	ENST00000290649:c.*335G>A,ENST00000492830:c.*335G>A	NA	NA	NA	NA	16q12.2	NA	Name=Egr-1	NA	NA	rs4924	0.57	0.57	0.604	0.598842	0.5268	0.4435	0.5173	0.7935	0.6278	0.53	0.46	0.51	0.78	0.5446	0.78	0	D	.	.	.	.	.	.	1.000	P	.	.	.	.	-1.026	T	0.000	T	.	0.563	7.044	-6.95	-1.542	-0.638	7.518	0.563027	NA	0	0.521095	0.743721	NA	0.659	NA	7.7408384
878	6	29141849	29141849	T	C	exonic	OR2J2	NA	nonsynonymous SNV	OR2J2:NM_030905:exon1:c.T437C:p.V146A	exonic	ENSG00000204700	NA	nonsynonymous SNV	ENSG00000204700:ENST00000377167:exon1:c.T437C:p.V146A	Score=278;Name=lod=18	NA	6p22.1	NA	NA	NA	NA	rs3116856	0.4	0.4	0.359	0.377995	0.5477	0.378	0.451	0.112	0.5112	0.58	0.37	0.46	0.12	0.5059	0.58	1	T	.	.	.	.	.	.	1.000	P	.	.	1.1	T	-0.976	T	0.014	T	0.039	-2.819	0	2.3	0.290	-0.161	7.973	-2.819406	NA	1	0.540868	0.187094	NA	0.341	NA	7.7388654
878	17	42248346	42248346	A	T	exonic	ASB16	NA	nonsynonymous SNV	ASB16:NM_080863:exon1:c.A189T:p.Q63H	exonic	ENSG00000161664	NA	nonsynonymous SNV	ENSG00000161664:ENST00000293414:exon1:c.A189T:p.Q63H,ENSG00000161664:ENST00000589618:exon1:c.A189T:p.Q63H	Score=443;Name=lod=84	NA	17q21.31	Score=791;Name=V$HEN1_01	NA	NA	NA	rs7218599	0.93	0.93	0.927	0.926518	0.8539	0.9881	0.928	0.9917	0.8487	0.87	0.98	0.91	0.99	0.8813	0.99	0.55	T	0.0	B	0.0	B	0.000	N	1.000	P	0.69	N	0.63	T	-0.992	T	0.000	T	0.066	2.353	13.83	3.06	0.128	-0.067	4.073	2.353447	2.353447	NA	0.86	0.973672	ID=COSM436689;OCCURENCE=1(breast)	0.942	NA	7.7381334
878	1	152280032	152280032	T	C	exonic	FLG	NA	nonsynonymous SNV	FLG:NM_002016:exon3:c.A7330G:p.K2444E	exonic	ENSG00000143631	NA	nonsynonymous SNV	ENSG00000143631:ENST00000368799:exon3:c.A7330G:p.K2444E	NA	NA	1q21.3	NA	NA	NA	NA	rs71625200	0.27	0.27	0.233	0.343051	0.171	0.6071	0.4222	0.1218	0.4908	0.14	0.56	0.3	0.1	0.2608	0.56	1	T	0.0	B	0.0	B	.	.	1.000	P	-2.535	N	4.71	T	-1.010	T	0.000	T	0.027	0.652	7.499	2.1	0.313	-0.889	3.985	0.652241	NA	1	0.163643	0.135951	NA	0.181	NA	7.7378904
878	19	35449760	35449760	G	C	exonic	ZNF792	NA	synonymous SNV	ZNF792:NM_175872:exon4:c.C999G:p.T333T	exonic	ENSG00000180884	NA	synonymous SNV	ENSG00000180884:ENST00000605484:exon2:c.C798G:p.T266T,ENSG00000180884:ENST00000404801:exon4:c.C999G:p.T333T	Score=419;Name=lod=67	NA	19q13.11	NA	Name=SETDB1	Name=12	NA	rs2651080	0.3	0.3	0.332	0.322484	0.33	0.2034	0.1844	0.4652	0.3425	0.34	0.21	0.22	0.43	0.3033	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.116642	NA	NA	0.295581	0.418747	NA	0.254	NA	7.7377856
878	1	152277055	152277055	C	G	exonic	FLG	NA	nonsynonymous SNV	FLG:NM_002016:exon3:c.G10307C:p.G3436A	exonic	ENSG00000143631	NA	nonsynonymous SNV	ENSG00000143631:ENST00000368799:exon3:c.G10307C:p.G3436A	NA	NA	1q21.3	NA	NA	NA	NA	rs2065955	0.43	0.43	0.43	0.514177	0.1481	0.6349	0.4481	0.7882	0.4427	0.15	0.6	0.38	0.72	0.2987	0.72	0.47	T	0.876	P	0.748	P	.	.	1.000	P	1.79	L	3.22	T	-1.019	T	0.013	T	0.064	-0.036	3.831	-1.14	-0.563	-0.597	3.043	-0.035729	NA	0.05	0.150465	0.684748	NA	0.152	NA	7.7360684
878	7	77035392	77035392	T	C	exonic	GSAP	NA	nonsynonymous SNV	GSAP:NM_017439:exon2:c.A140G:p.H47R	exonic	ENSG00000186088	NA	nonsynonymous SNV	ENSG00000186088:ENST00000257626:exon2:c.A140G:p.H47R	Score=523;Name=lod=178	NA	7q11.23	Score=801;Name=V$HTF_01	NA	NA	NA	rs6949654	0.9	0.9	0.91	0.912939	0.8579	0.9226	0.8847	0.9841	0.8834	0.85	0.9	0.88	0.98	0.8767	0.98	1	T	0.0	B	0.0	B	0.056	N	0.000	P	-1.995	N	2.54	T	-1.000	T	0.000	T	0.055	-1.36	0.027	3.65	0.787	0.090	7.812	-1.360068	NA	0	0.863339	0.963855	NA	0.913	NA	7.7353944
879	14	103986255	103986255	C	T	exonic	CKB	NA	synonymous SNV	CKB:NM_001823:exon8:c.G1092A:p.E364E	exonic	ENSG00000166165	NA	synonymous SNV	ENSG00000166165:ENST00000553610:exon4:c.G486A:p.E162E,ENSG00000166165:ENST00000348956:exon8:c.G1092A:p.E364E	Score=611;Name=lod=406	NA	14q32.32	Score=784;Name=V$COMP1_01	Name=SP1	Name=15	NA	rs1803283	0.64	0.64	0.589	0.638978	0.6421	0.8224	0.7334	0.4312	0.6605	0.64	0.81	0.7	0.41	0.6598	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.202495	NA	NA	0.630147	0.493642	NA	0.645	NA	7.7346196
879	21	47787002	47787002	T	C	exonic	PCNT	NA	nonsynonymous SNV	PCNT:NM_006031:exon15:c.T3113C:p.V1038A	exonic	ENSG00000160299	NA	nonsynonymous SNV	ENSG00000160299:ENST00000359568:exon15:c.T3113C:p.V1038A	NA	NA	21q22.3	NA	NA	NA	NA	rs6518289	0.85	0.85	0.863	0.83766	0.8708	0.8006	0.8156	0.8911	0.7853	0.87	0.79	0.86	0.9	0.853	0.9	1	T	0.0	B	0.0	B	0.002	N	1.000	P	0	N	4.79	T	-0.932	T	0.000	T	0.046	0.732	7.888	-9.48	-2.268	-0.987	2.278	0.731685	NA	0.52	0.875233	0.89832	NA	0.841	NA	7.7343004
879	1	152279920	152279920	A	G	exonic	FLG	NA	nonsynonymous SNV	FLG:NM_002016:exon3:c.T7442C:p.L2481S	exonic	ENSG00000143631	NA	nonsynonymous SNV	ENSG00000143631:ENST00000368799:exon3:c.T7442C:p.L2481S	NA	NA	1q21.3	NA	NA	NA	NA	rs55650366	0.31	0.31	0.254	0.342452	0.171	0.6071	0.4207	0.1203	0.4908	0.17	0.62	0.35	0.14	0.2608	0.62	1	T	0.0	B	0.0	B	.	.	1.000	P	-2.625	N	5.58	T	-1.020	T	0.000	T	0.064	0.475	6.576	-1.66	-0.883	-1.345	4.593	0.474569	NA	0.8	0.167674	0.137994	NA	0.21	NA	7.7338594
879	19	20807352	20807352	C	T	exonic	ZNF626	NA	nonsynonymous SNV	ZNF626:NM_001076675:exon4:c.G1331A:p.R444K	exonic	ENSG00000188171	NA	nonsynonymous SNV	ENSG00000188171:ENST00000601440:exon4:c.G1331A:p.R444K	Score=389;Name=lod=51	NA	19p12	NA	NA	NA	NA	rs62107361	0.79	0.79	0.724	0.780551	0.8936	0.8413	0.8804	0.5802	0.8016	0.87	0.83	0.89	0.57	0.8346	0.89	1	T	0.0	B	0.002	B	.	.	0.000	P	0.02	N	.	.	-0.944	T	0.000	T	0.009	-3.172	0.001	-0.477	-1.581	-4.105	2.727	-3.171696	NA	1	0.871301	0.634141	NA	0.036	NA	7.7338324
879	2	133541454	133541454	A	G	exonic	NCKAP5	NA	nonsynonymous SNV	NCKAP5:NM_207363:exon14:c.T2930C:p.I977T	exonic	ENSG00000176771	NA	nonsynonymous SNV	ENSG00000176771:ENST00000317721:exon12:c.T2930C:p.I977T,ENSG00000176771:ENST00000409261:exon14:c.T2930C:p.I977T	NA	NA	2q21.2	NA	NA	NA	NA	rs12691830	0.7	0.7	0.696	0.704872	0.493	0.871	0.6657	0.8328	0.6063	0.49	0.89	0.63	0.83	0.591	0.89	0.79	T	0.0	B	0.0	B	0.216	N	0.123	P	-0.345	N	3.01	T	-1.029	T	0.000	T	0.002	-1.194	0.075	4.16	0.727	1.847	10.811	-1.193811	NA	0.7	0.516585	0.802708	ID=COSM1399445;OCCURENCE=1(large_intestine)	0.739	NA	7.7327484
879	12	6030405	6030405	A	G	exonic	ANO2	NA	nonsynonymous SNV	ANO2:NM_020373:exon3:c.T323C:p.V108A	exonic	ENSG00000047617	NA	nonsynonymous SNV	ENSG00000047617:ENST00000327087:exon3:c.T323C:p.V108A,ENSG00000047617:ENST00000356134:exon3:c.T323C:p.V108A,ENSG00000047617:ENST00000546188:exon3:c.T323C:p.V108A	NA	NA	12p13.31	Score=942;Name=V$AREB6_03	NA	NA	NA	rs3741903	0.16	0.16	0.132	0.15655	0.2167	0.1915	0.1441	0.0386	0.227	0.22	0.18	0.17	0.03	0.1811	0.22	1	T	0.0	B	0.0	B	0.313	N	1.000	P	-0.6	N	-0.22	T	-1.062	T	0.000	T	0.035	-2.586	0	1.37	-0.076	0.524	7.122	-2.586289	NA	1	0.203933	0.070943	NA	0.145	NA	7.7316004
879	9	86284178	86284178	C	A	exonic	UBQLN1	NA	synonymous SNV	UBQLN1:NM_013438:exon7:c.G1170T:p.L390L,UBQLN1:NM_053067:exon7:c.G1170T:p.L390L	exonic	ENSG00000135018	NA	synonymous SNV	ENSG00000135018:ENST00000257468:exon7:c.G1170T:p.L390L,ENSG00000135018:ENST00000376395:exon7:c.G1170T:p.L390L	Score=703;Name=lod=960	NA	9q21.32	NA	Name=CTCF	Name=18	NA	rs1044175	0.75	0.75	0.766	0.76897	0.6203	0.8819	0.7104	0.857	0.728	0.61	0.87	0.73	0.83	0.6887	0.87	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	1.149	9.68	1.98	-0.141	0.900	5.881	1.148963	NA	NA	0.626628	0.833409	ID=COSM1463297;OCCURENCE=1(large_intestine)	0.761	NA	7.7310386
879	19	4511647	4511647	C	G	exonic	PLIN4	NA	nonsynonymous SNV	PLIN4:NM_001080400:exon3:c.G2283C:p.K761N	exonic	ENSG00000167676	NA	nonsynonymous SNV	ENSG00000167676:ENST00000301286:exon3:c.G2283C:p.K761N	NA	NA	19p13.3	NA	NA	NA	NA	rs7256387	0.83	0.83	0.788	0.841853	0.8787	0.9752	0.8458	0.6702	0.8957	0.84	0.95	0.88	0.62	0.8443	0.95	1	T	0.0	B	0.0	B	0.550	N	1.000	P	-2.705	N	3.47	T	-0.876	T	0.000	T	0.019	-1.271	0.045	-9.38	-1.812	-4.807	4.625	-1.270695	NA	1	0.87938	0.701733	NA	0.688	NA	7.7309534
879	19	57326970	57326970	T	C	exonic	PEG3	NA	nonsynonymous SNV	PEG3:NM_001146186:exon7:c.A2840G:p.N947S,PEG3:NM_001146184:exon9:c.A2840G:p.N947S,PEG3:NM_001146185:exon9:c.A2462G:p.N821S,PEG3:NM_001146187:exon9:c.A2468G:p.N823S,PEG3:NM_006210:exon10:c.A2840G:p.N947S	exonic	ENSG00000198300	NA	nonsynonymous SNV	ENSG00000198300:ENST00000599534:exon7:c.A2840G:p.N947S,ENSG00000198300:ENST00000423103:exon9:c.A2840G:p.N947S,ENSG00000198300:ENST00000593695:exon9:c.A2462G:p.N821S,ENSG00000198300:ENST00000598410:exon9:c.A2468G:p.N823S,ENSG00000198300:ENST00000599577:exon9:c.A2840G:p.N947S,ENSG00000198300:ENST00000326441:exon10:c.A2840G:p.N947S	NA	NA	19q13.43	NA	NA	NA	NA	rs35851866	0.02	0.02	0.013	0.0159744	0.0447	0.001	0.0331	0.0008	0.0102	0.04	NA	0.03	0.002	0.022	0.04	0.45	T	0.495	P	0.15	B	0.315	N	.	.	1.67	L	4.26	T	-0.978	T	0.002	T	0.011	-0.44	1.955	1.46	0.248	-0.293	3.216	-0.440172	NA	0.24	0.035698	0.006355	NA	0.007	NA	7.7309354
879	1	39835817	39835817	A	G	exonic	MACF1	NA	nonsynonymous SNV	MACF1:NM_012090:exon47:c.A6868G:p.M2290V	exonic	ENSG00000127603	NA	nonsynonymous SNV	ENSG00000127603:ENST00000289893:exon15:c.A8374G:p.M2792V,ENSG00000127603:ENST00000317713:exon45:c.A6868G:p.M2290V,ENSG00000127603:ENST00000361689:exon45:c.A6868G:p.M2290V,ENSG00000127603:ENST00000539005:exon45:c.A6868G:p.M2290V,ENSG00000127603:ENST00000545844:exon46:c.A6868G:p.M2290V,ENSG00000127603:ENST00000372915:exon50:c.A13069G:p.M4357V,ENSG00000127603:ENST00000564288:exon51:c.A13054G:p.M4352V,ENSG00000127603:ENST00000567887:exon51:c.A13165G:p.M4389V	Score=472;Name=lod=111	NA	1p34.3	NA	NA	NA	NA	rs2296172	0.15	0.15	0.13	0.118211	0.1948	0.1587	0.2046	0.0121	0.0798	0.19	0.16	0.21	0.02	0.1853	0.22	0.92	T	0.0	B	0.002	B	0.556	N	0.000	P	-0.205	N	1.43	T	-0.968	T	0.000	T	0.12	-0.527	1.6	0.348	0.021	0.193	0.222	-0.526671	NA	0.34	0.22314	0.044031	NA	0.109	NA	7.7300934
879	1	67685387	67685387	T	C	exonic	IL23R	NA	nonsynonymous SNV	IL23R:NM_144701:exon7:c.T929C:p.L310P	exonic	ENSG00000162594	NA	nonsynonymous SNV	ENSG00000162594:ENST00000395227:exon2:c.T164C:p.L55P,ENSG00000162594:ENST00000347310:exon7:c.T929C:p.L310P,ENSG00000162594:ENST00000371002:exon7:c.T929C:p.L310P	NA	NA	1p31.3	NA	NA	NA	NA	rs7530511	0.87	0.87	0.854	0.875998	0.8569	0.9871	0.8501	0.7632	0.9519	0.85	0.98	0.87	0.77	0.8776	0.98	1	T	0.0	B	0.0	B	0.012	N	1.000	P	-1.04	N	0.61	T	-1.067	T	0.044	T	0.413	-2.122	0.005	4.88	1.392	2.350	10.070	-2.122214	NA	0.41	0.870465	0.762823	NA	0.899	NA	7.7283684
879	17	3628362	3628362	T	C	exonic	GSG2	NA	nonsynonymous SNV	GSG2:NM_031965:exon1:c.T1133C:p.V378A	exonic	ENSG00000177602	NA	nonsynonymous SNV	ENSG00000177602:ENST00000325418:exon1:c.T1133C:p.V378A	NA	NA	17p13.2	NA	Name=ZNF263	NA	NA	rs3809806	0.5	0.5	0.54	0.53135	0.5477	0.3353	0.3473	0.6838	0.6411	0.55	0.34	0.39	0.68	0.5145	0.68	0	D	0.0	B	0.0	B	0.470	N	1.000	P	-0.55	N	3.47	T	-0.977	T	0.000	T	0.006	-0.61	1.283	0.989	-0.105	-0.223	4.249	-0.609872	NA	1	0.543488	0.637086	ID=COSM1128744;OCCURENCE=1(prostate)	0.522	NA	7.7276454
879	3	46620614	46620614	T	C	exonic	TDGF1	NA	nonsynonymous SNV	TDGF1:NM_001174136:exon2:c.T17C:p.V6A,TDGF1:NM_003212:exon2:c.T65C:p.V22A	exonic	ENSG00000241186	NA	nonsynonymous SNV	ENSG00000241186:ENST00000296145:exon2:c.T65C:p.V22A,ENSG00000241186:ENST00000542931:exon2:c.T17C:p.V6A	NA	NA	3p21.31	NA	Name=RXRA,p300,FOXA2_(SC-6554),FOXA1_(SC-101058),TCF4,FOXA1_(C-20)	Name=27	NA	rs11130097	0.47	0.47	0.443	0.506989	0.5497	0.4157	0.4942	0.4887	0.591	0.54	0.4	0.5	0.42	0.5243	0.54	1	T	0.0	B	0.0	B	0.277	N	1.000	P	-1.155	N	0.23	T	-0.925	T	0.000	T	0.036	-2.153	0.005	1.43	0.064	-0.226	6.691	-2.153231	NA	1	0.532093	0.487971	NA	0.406	NA	7.7272404
880	5	38370537	38370537	T	C	exonic	EGFLAM	NA	nonsynonymous SNV	EGFLAM:NM_001205301:exon6:c.T685C:p.W229R,EGFLAM:NM_152403:exon6:c.T685C:p.W229R	exonic	ENSG00000164318	NA	nonsynonymous SNV	ENSG00000164318:ENST00000322350:exon6:c.T685C:p.W229R,ENSG00000164318:ENST00000354891:exon6:c.T685C:p.W229R	NA	NA	5p13.2	NA	NA	NA	NA	rs1465567	0.26	0.26	0.254	0.257188	0.2038	0.1796	0.1354	0.4372	0.2352	0.2	0.21	0.16	0.49	0.2117	0.49	0.88	T	0.0	B	0.0	B	0.018	N	1.000	P	-0.735	N	0.68	T	-0.977	T	0.000	T	0.016	0.573	7.093	-2.02	-0.389	-0.353	5.516	0.572574	NA	0.95	0.193372	0.396278	ID=COSM149818;OCCURENCE=1(stomach)	0.203	NA	7.7244614
880	7	89861890	89861890	G	T	exonic	STEAP2	NA	nonsynonymous SNV	STEAP2:NM_152999:exon5:c.G1425T:p.M475I,STEAP2:NM_001040665:exon6:c.G1425T:p.M475I,STEAP2:NM_001244944:exon6:c.G1425T:p.M475I	exonic	ENSG00000157214	NA	nonsynonymous SNV	ENSG00000157214:ENST00000287908:exon5:c.G1425T:p.M475I,ENSG00000157214:ENST00000394621:exon6:c.G1425T:p.M475I,ENSG00000157214:ENST00000394622:exon6:c.G1425T:p.M475I	NA	NA	7q21.13	NA	Name=p300	Name=13	NA	rs194525	0.93	0.93	0.929	0.944089	0.8708	0.999	0.8991	0.9675	0.9632	0.88	1	0.89	0.98	0.8932	1	0.41	T	0.0	B	0.001	B	0.728	N	1.000	P	0	N	3.61	T	-0.994	T	0.000	T	0.065	-0.01	3.963	3.79	0.427	0.407	7.652	-0.009885	NA	0.55	0.846673	0.947798	NA	0.92	NA	7.7226604
880	13	111358000	111358000	T	G	intronic	CARS2	NA	NA	NA	exonic	ENSG00000134905	NA	nonsynonymous SNV	ENSG00000134905:ENST00000542709:exon1:c.A116C:p.N39T	NA	NA	13q34	NA	Name=PAX5-C20	NA	NA	rs9521906	0.13	0.13	0.121	0.0920527	0.2256	0.0804	0.1052	0.0182	0.0573	0.23	0.09	0.12	0.03	0.2191	0.23	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.999	T	0.000	T	0.035	0.363	5.972	-2.62	-0.491	-0.030	3.035	0.363289	NA	NA	NA	NA	NA	0.13	NA	7.7219667
880	2	39050141	39050141	A	C	exonic	DHX57	NA	synonymous SNV	DHX57:NM_198963:exon17:c.T3285G:p.S1095S	exonic	ENSG00000163214	NA	synonymous SNV	ENSG00000163214:ENST00000295373:exon17:c.T3285G:p.S1095S	Score=625;Name=lod=462	NA	2p22.1	NA	NA	NA	NA	rs3770681	0.62	0.62	0.58	0.599241	0.66	0.8046	0.5836	0.3306	0.6994	0.67	0.81	0.6	0.33	0.6356	0.81	0.02	D	.	.	.	.	0.000	D	0.000	P	.	.	1.36	T	-1.066	T	0.000	T	.	1.103	9.5	1.79	0.381	0.123	4.177	1.102961	NA	NA	0.649535	0.374943	NA	0.486	NA	7.7215316
880	22	31342376	31342376	G	C	exonic	MORC2	NA	synonymous SNV	MORC2:NM_014941:exon7:c.C192G:p.T64T	exonic	ENSG00000133422	NA	synonymous SNV	ENSG00000133422:ENST00000397641:exon6:c.C378G:p.T126T,ENSG00000133422:ENST00000215862:exon7:c.C192G:p.T64T	Score=614;Name=lod=418	NA	22q12.2	Score=948;Name=V$P53_02	NA	Name=3	NA	rs2072132	0.37	0.37	0.346	0.352436	0.3091	0.6498	0.3271	0.2095	0.3016	0.3	0.59	0.36	0.24	0.3193	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.089202	NA	NA	0.317442	0.246482	NA	0.312	NA	7.7208246
880	1	59125683	59125683	C	T	exonic	MYSM1	NA	nonsynonymous SNV	MYSM1:NM_001085487:exon20:c.G2473A:p.E825K	exonic	ENSG00000162601	NA	nonsynonymous SNV	ENSG00000162601:ENST00000472487:exon20:c.G2473A:p.E825K	NA	NA	1p32.1	NA	NA	NA	NA	rs232777	0.26	0.26	0.247	0.302516	0.2018	0.2143	0.2666	0.4599	0.3098	0.21	0.2	0.23	0.43	0.2409	0.43	0.01	D	0.005	B	0.006	B	0.692	N	1.000	P	1.39	L	1.73	T	-0.937	T	0.000	T	0.118	2.866	15.55	1.26	0.413	0.117	3.864	2.86596	2.86596	NA	0.171415	0.389474	ID=COSM146527;OCCURENCE=1(stomach)	0.232	NA	7.7192184
880	21	38568009	38568009	G	C	exonic	TTC3	NA	nonsynonymous SNV	TTC3:NM_001001894:exon42:c.G5251C:p.D1751H,TTC3:NM_003316:exon42:c.G5251C:p.D1751H	exonic	ENSG00000182670	NA	nonsynonymous SNV	ENSG00000182670:ENST00000354749:exon41:c.G5251C:p.D1751H,ENSG00000182670:ENST00000355666:exon42:c.G5251C:p.D1751H,ENSG00000182670:ENST00000399017:exon42:c.G5251C:p.D1751H	NA	NA	21q22.13	NA	NA	NA	NA	rs1053966	0.72	0.72	0.712	0.738419	0.5129	0.8492	0.7334	0.9024	0.638	0.51	0.85	0.71	0.91	0.6068	0.91	0.39	T	0.0	B	0.0	B	0.299	N	1.000	P	-1.59	N	3.13	T	-1.016	T	0.000	T	0.322	-0.966	0.314	2.82	0.145	-2.243	7.643	-0.96611	NA	1	0.494767	0.843168	NA	0.761	NA	7.7188664
880	1	145562087	145562087	G	A	exonic	ANKRD35	NA	nonsynonymous SNV	ANKRD35:NM_144698:exon10:c.G1775A:p.R592Q	exonic	ENSG00000198483	NA	nonsynonymous SNV	ENSG00000198483:ENST00000355594:exon10:c.G1775A:p.R592Q	NA	NA	1q21.1	NA	NA	NA	NA	rs41315701	0.14	0.14	0.121	0.123602	0.2117	0.1319	0.111	0.0129	0.183	0.22	0.17	0.12	0.02	0.1776	0.23	0.44	T	0.003	B	0.001	B	0.547	N	1.000	P	0.805	L	0.92	T	-1.001	T	0.022	T	0.016	-0.052	3.749	0.923	0.014	1.200	4.291	-0.052032	NA	0.1	0.227844	0.052429	NA	0.174	NA	7.7161894
880	2	160112881	160112881	G	T	exonic	WDSUB1	NA	nonsynonymous SNV	WDSUB1:NM_001128212:exon9:c.C958A:p.R320S,WDSUB1:NM_001128213:exon9:c.C958A:p.R320S,WDSUB1:NM_152528:exon9:c.C958A:p.R320S	exonic	ENSG00000196151	NA	nonsynonymous SNV	ENSG00000196151:ENST00000358147:exon5:c.C682A:p.R228S,ENSG00000196151:ENST00000359774:exon9:c.C958A:p.R320S,ENSG00000196151:ENST00000392796:exon9:c.C958A:p.R320S,ENSG00000196151:ENST00000409124:exon9:c.C958A:p.R320S,ENSG00000196151:ENST00000409990:exon9:c.C958A:p.R320S	NA	NA	2q24.2	NA	NA	Name=54	NA	rs7591849	0.5	0.5	0.546	0.473642	0.5398	0.2738	0.3689	0.7421	0.3231	0.54	0.29	0.42	0.73	0.5046	0.73	0.76	T	0.0	B	0.0	B	0.049	N	1.000	P	-0.17	N	0.66	T	-0.947	T	0.000	T	0.099	1.568	11.2	4.37	0.378	0.383	6.652	1.568119	1.568119	0.76	0.573372	0.717885	ID=COSM148963;OCCURENCE=1(stomach)	0.58	NA	7.7155614
881	11	67372477	67372477	G	T	intergenic	GSTP1,NDUFV1	dist=18353;dist=1846	NA	NA	exonic	ENSG00000184224	NA	nonsynonymous SNV	ENSG00000184224:ENST00000446232:exon2:c.C64A:p.P22T,ENSG00000184224:ENST00000333139:exon3:c.C64A:p.P22T	NA	NA	11q13.2	NA	NA	NA	NA	rs12421329	0.33	0.33	0.306	0.323283	0.3767	0.1935	0.5202	0.326	0.2587	0.37	0.19	0.49	0.31	0.3735	0.49	0	D	0.914	P	0.752	P	.	.	.	.	.	.	0.44	T	-0.965	T	0.000	T	0.172	1.239	10.03	-0.956	-0.187	-1.125	3.140	1.238781	1.238781	NA	0.369702	0.323409	NA	0.341	NA	7.7134314
881	2	70188676	70188676	T	C	exonic	ASPRV1	NA	nonsynonymous SNV	ASPRV1:NM_152792:exon1:c.A145G:p.T49A	exonic	ENSG00000244617	NA	nonsynonymous SNV	ENSG00000244617:ENST00000320256:exon1:c.A145G:p.T49A	NA	NA	2p13.3	NA	NA	NA	NA	rs3796097	0.67	0.67	0.653	0.698083	0.503	0.6815	0.7421	0.9145	0.592	0.5	0.65	0.7	0.91	0.5972	0.91	0.32	T	0.002	B	0.001	B	0.977	N	1.000	P	0	N	0.95	T	-1.018	T	0.000	T	0.01	-0.385	2.19	-4.7	-1.206	-0.869	11.871	-0.385484	NA	0.49	0.52093	0.847254	NA	0.761	NA	7.7122034
881	4	123229132	123229132	C	T	exonic	KIAA1109	NA	synonymous SNV	KIAA1109:NM_015312:exon56:c.C9870T:p.A3290A	exonic	ENSG00000138688	NA	synonymous SNV	ENSG00000138688:ENST00000388738:exon56:c.C9870T:p.A3290A,ENSG00000138688:ENST00000455637:exon56:c.C9870T:p.A3290A,ENSG00000138688:ENST00000264501:exon58:c.C9870T:p.A3290A	Score=670;Name=lod=706	NA	4q27	NA	NA	NA	NA	rs7688384	0.26	0.26	0.236	0.277157	0.3072	0.3611	0.3084	0.0333	0.4673	0.32	0.35	0.31	0.04	0.3233	0.35	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.934	T	0.000	T	.	1.079	9.403	4.74	0.503	-0.047	2.724	1.078547	NA	NA	0.324872	0.082609	ID=COSM1131282;OCCURENCE=1(prostate)	0.188	NA	7.7112946
881	10	81317045	81317045	G	T	exonic	SFTPA2	NA	nonsynonymous SNV	SFTPA2:NM_001098668:exon6:c.C667A:p.Q223K	exonic	ENSG00000185303	NA	nonsynonymous SNV	ENSG00000185303:ENST00000372327:exon5:c.C667A:p.Q223K,ENSG00000185303:ENST00000372325:exon6:c.C667A:p.Q223K	NA	NA	10q22.3	NA	NA	NA	NA	rs1965708	0.23	0.23	0.201	0.254792	0.2018	0.2024	0.1383	0.3964	0.2546	0.2	0.2	0.15	0.39	0.2216	0.39	0.69	T	0.0	B	0.001	B	0.679	N	1.000	P	-0.75	N	2.26	T	-0.903	T	0.000	T	0.034	-2.528	0.003	-3.22	-0.297	-0.559	10.681	-2.528253	NA	1	0.199953	0.357694	NA	0.275	NA	7.7099804
881	15	45695695	45695695	G	A	exonic	SPATA5L1	NA	synonymous SNV	SPATA5L1:NM_024063:exon1:c.G1068A:p.R356R	exonic	ENSG00000171763	NA	synonymous SNV	ENSG00000171763:ENST00000305560:exon1:c.G1068A:p.R356R,ENSG00000171763:ENST00000531970:exon1:c.G1068A:p.R356R,ENSG00000171763:ENST00000559860:exon1:c.G1068A:p.R356R	Score=393;Name=lod=53	NA	15q21.1	NA	Name=Sin3Ak-20,HA-E2F1,HEY1,AP-2gamma,Pol2(phosphoS2),Pol2,YY1_(C-20),E2F6_(H-50),ETS1,TAF1,GABP,BAF155	Name=114	NA	rs1153849	0.6	0.6	0.588	0.617812	0.2753	0.8145	0.5706	0.8676	0.4632	0.27	0.85	0.51	0.86	0.4195	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.868165	NA	NA	0.262917	0.746661	NA	0.442	NA	7.7089496
881	14	104559919	104559919	T	C	exonic	ASPG	NA	nonsynonymous SNV	ASPG:NM_001080464:exon3:c.T283C:p.C95R	exonic	ENSG00000166183	NA	nonsynonymous SNV	ENSG00000166183:ENST00000455920:exon3:c.T283C:p.C95R,ENSG00000166183:ENST00000546892:exon3:c.T283C:p.C95R,ENSG00000166183:ENST00000551177:exon3:c.T283C:p.C95R	NA	NA	14q32.33	NA	NA	NA	NA	rs1770984	0.4	0.4	0.385	0.41274	0.1809	0.3869	0.3314	0.6823	0.3712	0.19	0.4	0.36	0.75	0.2736	0.75	1	T	0.0	B	0.0	B	0.064	N	1.000	P	-1.47	N	2.22	T	-1.004	T	0.000	T	0.456	-2.184	0.005	2.46	0.637	0.723	4.463	-2.183746	NA	1	0.169969	0.55077	NA	0.196	NA	7.7088644
881	14	38277999	38277999	C	T	intergenic	FOXA1,SSTR1	dist=213674;dist=399205	NA	NA	exonic	ENSG00000139865	NA	nonsynonymous SNV	ENSG00000139865:ENST00000267368:exon5:c.C419T:p.T140I,ENSG00000139865:ENST00000476979:exon6:c.C419T:p.T140I,ENSG00000139865:ENST00000382320:exon7:c.C659T:p.T220I,ENSG00000139865:ENST00000478811:exon7:c.C710T:p.T237I,ENSG00000139865:ENST00000553443:exon24:c.C4517T:p.T1506I	Score=474;Name=lod=113	NA	14q21.1	NA	NA	NA	NA	rs4901284	0.26	0.26	0.215	0.293331	0.3857	0.0873	0.5058	0.143	0.4632	0.39	0.06	0.48	0.13	0.3598	0.48	0.25	T	0.0	B	0.002	B	0.622	N	1.000	P	.	.	0.32	T	-0.931	T	0.000	T	0.037	-0.61	1.283	4.48	0.432	1.123	7.704	-0.609768	NA	0.64	0.379897	0.173261	NA	0.29	NA	7.7079364
881	3	158388780	158388780	T	C	exonic	LXN	NA	nonsynonymous SNV	LXN:NM_020169:exon2:c.A158G:p.H53R	exonic	ENSG00000079257	NA	nonsynonymous SNV	ENSG00000079257:ENST00000264265:exon2:c.A158G:p.H53R	Score=497;Name=lod=139	NA	3q25.32	NA	NA	NA	NA	rs8455	0.54	0.54	0.542	0.576677	0.5437	0.3839	0.5288	0.7474	0.6125	0.56	0.38	0.53	0.73	0.5447	0.73	0.37	T	0.001	B	0.001	B	0.445	N	0.000	P	0.4	N	1.9	T	-0.999	T	0.000	T	0.03	1.196	9.858	-2.53	-0.464	0.105	12.057	1.19562	NA	1	0.538193	0.702479	NA	0.551	NA	7.7067404
881	12	68720627	68720627	G	A	exonic	MDM1	NA	nonsynonymous SNV	MDM1:NM_001205028:exon3:c.C308T:p.T103I,MDM1:NM_017440:exon3:c.C308T:p.T103I,MDM1:NM_020128:exon3:c.C308T:p.T103I	exonic	ENSG00000111554	NA	nonsynonymous SNV	ENSG00000111554:ENST00000303145:exon3:c.C308T:p.T103I,ENSG00000111554:ENST00000411698:exon3:c.C308T:p.T103I,ENSG00000111554:ENST00000430606:exon3:c.C308T:p.T103I,ENSG00000111554:ENST00000541686:exon3:c.C293T:p.T98I	NA	NA	12q15	NA	NA	Name=20	NA	rs962976	0.68	0.68	0.677	0.67512	0.7187	0.4484	0.7378	0.8079	0.6401	0.71	0.47	0.75	0.81	0.6947	0.81	.	.	0.967	D	0.6	P	0.208	N	1.000	P	0.69	N	1.89	T	-1.035	T	0.000	T	0.145	1.874	12.22	0.256	0.077	-0.119	6.446	1.873951	1.873951	0.04	0.713721	0.785066	NA	0.659	NA	7.7062124
882	2	1460004	1460004	G	T	exonic	TPO	NA	nonsynonymous SNV	TPO:NM_175721:exon6:c.G769T:p.A257S,TPO:NM_175722:exon6:c.G769T:p.A257S,TPO:NM_000547:exon7:c.G769T:p.A257S,TPO:NM_001206744:exon7:c.G769T:p.A257S,TPO:NM_001206745:exon7:c.G769T:p.A257S,TPO:NM_175719:exon7:c.G769T:p.A257S	exonic	ENSG00000115705	NA	nonsynonymous SNV	ENSG00000115705:ENST00000422464:exon4:c.G556T:p.A186S,ENSG00000115705:ENST00000382198:exon6:c.G769T:p.A257S,ENSG00000115705:ENST00000329066:exon7:c.G769T:p.A257S,ENSG00000115705:ENST00000337415:exon7:c.G769T:p.A257S,ENSG00000115705:ENST00000345913:exon7:c.G769T:p.A257S,ENSG00000115705:ENST00000346956:exon7:c.G769T:p.A257S,ENSG00000115705:ENST00000349624:exon7:c.G769T:p.A257S,ENSG00000115705:ENST00000382201:exon7:c.G769T:p.A257S	NA	NA	2p25.3	NA	NA	NA	NA	rs4927611	0.33	0.33	0.322	0.365415	0.3668	0.1825	0.3674	0.3918	0.5153	0.37	0.18	0.37	0.41	0.3791	0.41	0.08	T	0.716	P	0.407	B	0.667	N	1.000	P	1.215	L	-0.72	T	-1.037	T	0.000	T	0.054	0.517	6.803	0.493	0.121	1.055	9.784	0.517173	NA	0.04	0.383953	0.376078	NA	0.341	NA	7.7034804
882	12	132335592	132335592	G	A	exonic	MMP17	NA	nonsynonymous SNV	MMP17:NM_016155:exon10:c.G1585A:p.D529N	exonic	ENSG00000198598	NA	nonsynonymous SNV	ENSG00000198598:ENST00000535004:exon3:c.G205A:p.D69N,ENSG00000198598:ENST00000535291:exon9:c.G1333A:p.D445N,ENSG00000198598:ENST00000360564:exon10:c.G1585A:p.D529N	NA	NA	12q24.33	NA	NA	NA	NA	rs11835665	0.15	0.15	0.142	0.140974	0.2167	NA	0.2061	0.1785	0.1115	0.22	NA	0.24	0.18	0.1981	0.24	0.06	T	0.04	B	0.004	B	0.574	U	1.000	P	0	N	2.28	T	-0.949	T	0.000	T	0.085	1.084	9.426	1.51	0.008	3.377	7.369	1.084275	NA	0.05	0.216197	0.179691	NA	0.116	NA	7.7023364
882	1	21797204	21797204	G	C	exonic	NBPF3	NA	nonsynonymous SNV	NBPF3:NM_001256417:exon3:c.G213C:p.E71D,NBPF3:NM_001256416:exon4:c.G423C:p.E141D,NBPF3:NM_032264:exon4:c.G423C:p.E141D	exonic	ENSG00000142794	NA	nonsynonymous SNV	ENSG00000142794:ENST00000454000:exon3:c.G213C:p.E71D,ENSG00000142794:ENST00000318249:exon4:c.G423C:p.E141D,ENSG00000142794:ENST00000342104:exon4:c.G423C:p.E141D,ENSG00000142794:ENST00000318220:exon7:c.G255C:p.E85D,ENSG00000142794:ENST00000434838:exon8:c.G255C:p.E85D	NA	NA	1p36.12	NA	NA	NA	NA	rs72872292	0.05	0.05	0.039	0.0429313	0.0388	NA	0.0331	0.0983	0.0235	0.05	NA	0.04	0.1	0.043	0.1	0.19	T	0.672	P	0.201	B	.	.	1.000	N	0.255	N	4.08	T	-0.892	T	0.000	T	0.112	0.276	5.493	0.278	0.104	0.874	3.495	0.276043	NA	0	0.049767	0.098275	NA	0.065	NA	7.7017664
882	10	135204950	135204950	C	G	exonic	PAOX	NA	nonsynonymous SNV	PAOX:NM_207128:exon6:c.C1369G:p.Q457E	exonic	ENSG00000148832	NA	nonsynonymous SNV	ENSG00000148832:ENST00000357296:exon6:c.C1369G:p.Q457E	NA	NA	10q26.3	Score=766;Name=V$HEN1_02	NA	NA	NA	rs1046175	0.86	0.86	0.854	0.845048	0.8738	0.9792	0.8948	0.68	0.865	0.89	0.97	0.86	0.67	0.8826	0.97	1	T	0.0	B	0.001	B	.	.	1.000	P	.	.	0.92	T	-0.950	T	0.000	T	.	-1.497	0.017	2.32	0.097	-1.219	7.504	-1.496625	NA	1	0.875669	0.736723	ID=COSM427291,COSM427292;OCCURENCE=1(breast)	0.855	NA	7.7012644
882	15	62202482	62202482	C	T	exonic	VPS13C	NA	nonsynonymous SNV	VPS13C:NM_017684:exon62:c.G8609A:p.S2870N,VPS13C:NM_018080:exon62:c.G8609A:p.S2870N,VPS13C:NM_001018088:exon64:c.G8738A:p.S2913N,VPS13C:NM_020821:exon64:c.G8738A:p.S2913N	exonic	ENSG00000129003	NA	nonsynonymous SNV	ENSG00000129003:ENST00000249837:exon62:c.G8609A:p.S2870N,ENSG00000129003:ENST00000395898:exon62:c.G8609A:p.S2870N,ENSG00000129003:ENST00000261517:exon64:c.G8738A:p.S2913N,ENSG00000129003:ENST00000395896:exon64:c.G8738A:p.S2913N	Score=566;Name=lod=265	NA	15q22.2	NA	NA	NA	NA	rs10851704	0.54	0.54	0.512	0.516374	0.5517	0.4732	0.6671	0.4841	0.4611	0.56	0.49	0.64	0.49	0.5472	0.64	1	T	0.0	B	0.001	B	0.000	N	1.000	P	-0.775	N	1.65	T	-0.914	T	0.000	T	0.005	0.068	4.368	3.54	0.133	0.853	9.591	0.06792	NA	1	0.535233	0.498865	NA	0.101	NA	7.6992004
882	8	3265590	3265590	C	T	exonic	CSMD1	NA	synonymous SNV	CSMD1:NM_033225:exon14:c.G1902A:p.Q634Q	exonic	ENSG00000183117	NA	synonymous SNV	ENSG00000183117:ENST00000537824:exon14:c.G1902A:p.Q634Q,ENSG00000183117:ENST00000539096:exon14:c.G1902A:p.Q634Q,ENSG00000183117:ENST00000542608:exon14:c.G1902A:p.Q634Q,ENSG00000183117:ENST00000400186:exon15:c.G1905A:p.Q635Q,ENSG00000183117:ENST00000520002:exon15:c.G1905A:p.Q635Q,ENSG00000183117:ENST00000602557:exon15:c.G1905A:p.Q635Q,ENSG00000183117:ENST00000602723:exon15:c.G1905A:p.Q635Q	Score=541;Name=lod=210	NA	8p23.2	Score=834;Name=V$ISRE_01	NA	NA	NA	rs10088378	0.6	0.6	0.617	0.603035	0.67	0.3383	0.6527	0.7027	0.637	0.66	0.36	0.68	0.73	0.6319	0.73	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.967	T	0.000	T	.	-0.461	1.869	2.4	0.218	0.210	14.232	-0.460746	NA	NA	0.667638	0.676532	NA	0.522	NA	7.6971286
883	2	11702661	11702661	A	C	exonic	GREB1	NA	nonsynonymous SNV	GREB1:NM_014668:exon3:c.A230C:p.N77T,GREB1:NM_033090:exon3:c.A230C:p.N77T,GREB1:NM_148903:exon3:c.A230C:p.N77T	exonic	ENSG00000196208	NA	nonsynonymous SNV	ENSG00000196208:ENST00000234142:exon2:c.A230C:p.N77T,ENSG00000196208:ENST00000263834:exon3:c.A230C:p.N77T,ENSG00000196208:ENST00000381483:exon3:c.A230C:p.N77T,ENSG00000196208:ENST00000381486:exon3:c.A230C:p.N77T	NA	NA	2p25.1	Score=953;Name=V$LYF1_01	NA	NA	NA	rs10929757	0.42	0.42	0.372	0.415735	0.5427	0.5496	0.5144	0.0333	0.5941	0.57	0.52	0.47	0.06	0.5328	0.57	0.31	T	0.003	B	0.009	B	0.003	N	1.000	P	1.355	L	3.33	T	-0.952	T	0.000	T	0.101	0.475	6.58	1.6	0.037	2.998	1.527	0.475366	NA	0.34	0.563372	0.13232	NA	0.471	NA	7.6944614
883	9	4576680	4576680	T	C	exonic	SLC1A1	NA	synonymous SNV	SLC1A1:NM_004170:exon10:c.T1110C:p.T370T	exonic	ENSG00000106688	NA	synonymous SNV	ENSG00000106688:ENST00000262352:exon10:c.T1110C:p.T370T	NA	NA	9p24.2	NA	NA	NA	NA	rs301430	0.45	0.45	0.431	0.458267	0.328	0.5883	0.3833	0.5129	0.4376	0.33	0.61	0.39	0.49	0.3637	0.61	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.002	T	0.000	T	.	-0.593	1.345	-11.1	-3.284	-6.163	1.972	-0.593042	NA	NA	0.281163	0.496596	NA	0.384	NA	7.6938036
883	8	90995019	90995019	C	T	exonic	NBN	NA	synonymous SNV	NBN:NM_002485:exon2:c.G102A:p.L34L	exonic	ENSG00000104320	NA	synonymous SNV	ENSG00000104320:ENST00000265433:exon2:c.G102A:p.L34L,ENSG00000104320:ENST00000519426:exon2:c.G102A:p.L34L,ENSG00000104320:ENST00000523444:exon2:c.G102A:p.L34L,ENSG00000104320:ENST00000396252:exon4:c.G102A:p.L34L	Score=475;Name=lod=114	NA	8q21.3	Score=832;Name=V$BRN2_01	NA	Name=15	NA	rs1063045	0.35	0.35	0.321	0.379193	0.3062	0.4673	0.3818	0.3124	0.4519	0.31	0.46	0.34	0.29	0.3527	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.083831	NA	NA	0.314651	0.310259	NA	0.37	NA	7.6931156
883	15	90126121	90126121	C	T	exonic	TICRR	NA	nonsynonymous SNV	TICRR:NM_152259:exon2:c.C859T:p.R287C	exonic	ENSG00000140534	NA	nonsynonymous SNV	ENSG00000140534:ENST00000268138:exon2:c.C859T:p.R287C,ENSG00000140534:ENST00000560985:exon2:c.C859T:p.R287C	Score=391;Name=lod=52	NA	15q26.1	NA	NA	NA	NA	rs10775247	0.42	0.42	0.394	0.386581	0.5616	0.3105	0.428	0.2383	0.456	0.56	0.35	0.48	0.24	0.512	0.57	0.67	T	0.004	B	0.0	B	0.008	N	0.951	P	-1.87	N	2.68	T	-1.014	T	0.000	T	0.121	0.509	6.761	-2.11	-0.528	0.373	7.220	0.509198	NA	0.7	0.567424	0.293557	NA	0.399	NA	7.6923094
883	1	157514091	157514091	C	T	exonic	FCRL5	NA	nonsynonymous SNV	FCRL5:NM_001195388:exon5:c.G805A:p.V269I,FCRL5:NM_031281:exon5:c.G805A:p.V269I	exonic	ENSG00000143297	NA	nonsynonymous SNV	ENSG00000143297:ENST00000368191:exon4:c.G550A:p.V184I,ENSG00000143297:ENST00000356953:exon5:c.G805A:p.V269I,ENSG00000143297:ENST00000361835:exon5:c.G805A:p.V269I,ENSG00000143297:ENST00000368189:exon5:c.G805A:p.V269I,ENSG00000143297:ENST00000368190:exon5:c.G805A:p.V269I	NA	NA	1q23.1	NA	NA	NA	NA	rs12036228	0.21	0.21	0.207	0.197684	0.2376	0.0784	0.1729	0.295	0.1656	0.25	0.08	0.2	0.31	0.1923	0.31	0.58	T	0.217	B	0.103	B	.	.	1.000	P	0.6	N	2.7	T	-0.912	T	0.007	T	0.055	0.587	7.167	-1.58	-0.792	-2.680	10.547	0.58688	NA	0.71	0.214186	0.293917	NA	0.217	NA	7.6892474
883	15	63351840	63351840	C	A	exonic	TPM1	NA	synonymous SNV	TPM1:NM_001018008:exon3:c.C345A:p.A115A,TPM1:NM_000366:exon4:c.C453A:p.A151A,TPM1:NM_001018004:exon4:c.C453A:p.A151A,TPM1:NM_001018005:exon4:c.C453A:p.A151A,TPM1:NM_001018006:exon4:c.C453A:p.A151A,TPM1:NM_001018007:exon4:c.C453A:p.A151A,TPM1:NM_001018020:exon4:c.C453A:p.A151A	exonic	ENSG00000140416	NA	synonymous SNV	ENSG00000140416:ENST00000558264:exon2:c.C75A:p.A25A,ENSG00000140416:ENST00000317516:exon3:c.C345A:p.A115A,ENSG00000140416:ENST00000334895:exon3:c.C345A:p.A115A,ENSG00000140416:ENST00000404484:exon3:c.C345A:p.A115A,ENSG00000140416:ENST00000559281:exon3:c.C345A:p.A115A,ENSG00000140416:ENST00000559831:exon3:c.C225A:p.A75A,ENSG00000140416:ENST00000560615:exon3:c.C75A:p.A25A,ENSG00000140416:ENST00000560959:exon3:c.C345A:p.A115A,ENSG00000140416:ENST00000267996:exon4:c.C453A:p.A151A,ENSG00000140416:ENST00000288398:exon4:c.C453A:p.A151A,ENSG00000140416:ENST00000358278:exon4:c.C453A:p.A151A,ENSG00000140416:ENST00000403994:exon4:c.C453A:p.A151A,ENSG00000140416:ENST00000559397:exon4:c.C453A:p.A151A,ENSG00000140416:ENST00000559556:exon4:c.C453A:p.A151A,ENSG00000140416:ENST00000357980:exon5:c.C579A:p.A193A	Score=707;Name=lod=995	NA	15q22.2	Score=787;Name=V$CDPCR3_01	NA	Name=5	NA	rs1071646	0.7	0.7	0.697	0.705671	0.66	0.9504	0.5591	0.6112	0.7321	0.65	0.96	0.58	0.55	0.6737	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.398486	2.398486	NA	0.645814	0.615978	NA	0.71	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_provided|not_specified;CLNREVSTAT=single|single;CLNACC=RCV000024584.2|RCV000036332.1;CLNDSDB=.|.;CLNDSDBID=.|.	7.6871526
884	3	167000256	167000256	G	C	exonic	ZBBX	NA	nonsynonymous SNV	ZBBX:NM_001199202:exon19:c.C1820G:p.A607G,ZBBX:NM_024687:exon19:c.C1907G:p.A636G,ZBBX:NM_001199201:exon20:c.C2024G:p.A675G	exonic	ENSG00000169064	NA	nonsynonymous SNV	ENSG00000169064:ENST00000392767:exon16:c.C1907G:p.A636G,ENSG00000169064:ENST00000307529:exon17:c.C2024G:p.A675G,ENSG00000169064:ENST00000392764:exon19:c.C1820G:p.A607G,ENSG00000169064:ENST00000392766:exon19:c.C1907G:p.A636G,ENSG00000169064:ENST00000455345:exon19:c.C2024G:p.A675G	Score=352;Name=lod=36	NA	3q26.1	NA	NA	NA	NA	rs12638625	0.39	0.39	0.364	NA	NA	NA	NA	NA	NA	0.29	0.65	0.38	0.27	0.3471	0.65	0.16	T	0.221	B	0.161	B	0.508	N	1.000	P	1.67	L	2.68	T	-1.024	T	0.000	T	0.144	0.37	6.009	1.47	-0.014	0.491	4.429	0.370125	NA	0.08	0.301254	0.269929	NA	0.406	NA	7.6849794
884	1	15909850	15909850	C	G	exonic	AGMAT	NA	nonsynonymous SNV	AGMAT:NM_024758:exon2:c.G313C:p.G105R	exonic	ENSG00000116771	NA	nonsynonymous SNV	ENSG00000116771:ENST00000375826:exon2:c.G313C:p.G105R	NA	NA	1p36.21	Score=801;Name=V$COMP1_01	NA	NA	NA	rs6429757	0.63	0.63	0.638	0.633187	0.5288	0.6359	0.5274	0.9017	0.4499	0.55	0.6	0.53	0.87	0.5669	0.87	1	T	0.0	B	0.001	B	0.000	N	0.020	P	-1.535	N	-1.9	D	-0.981	T	0.000	T	0.044	-1.91	0.008	-1.41	-0.321	0.598	3.784	-1.909524	NA	1	0.552907	0.850885	NA	0.522	NA	7.6847264
884	2	239344412	239344412	C	T	exonic	ASB1	NA	synonymous SNV	ASB1:NM_001040445:exon3:c.C252T:p.I84I	exonic	ENSG00000065802	NA	nonsynonymous SNV	ENSG00000065802:ENST00000438264:exon2:c.C110T:p.S37L	Score=336;Name=lod=31	NA	2q37.3	Score=815;Name=V$CDPCR3_01	NA	NA	NA	rs3191996	0.07	0.07	0.042	0.0513179	0.1203	0.0595	0.0389	0.003	0.046	0.12	0.06	0.04	0.002	0.0881	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.922466	1.922466	NA	0.109419	0.022015	ID=COSM442594;OCCURENCE=1(breast)	0.065	NA	7.682181
884	2	80801346	80801346	T	C	exonic	CTNNA2	NA	synonymous SNV	CTNNA2:NM_001164883:exon13:c.T1800C:p.V600V,CTNNA2:NM_004389:exon13:c.T1800C:p.V600V	exonic	ENSG00000066032	NA	synonymous SNV	ENSG00000066032:ENST00000343114:exon7:c.T837C:p.V279V,ENSG00000066032:ENST00000402739:exon12:c.T1800C:p.V600V,ENSG00000066032:ENST00000540488:exon12:c.T1800C:p.V600V,ENSG00000066032:ENST00000541047:exon12:c.T1800C:p.V600V,ENSG00000066032:ENST00000361291:exon13:c.T1902C:p.V634V,ENSG00000066032:ENST00000496558:exon13:c.T1800C:p.V600V,ENSG00000066032:ENST00000466387:exon17:c.T1800C:p.V600V	Score=518;Name=lod=170	NA	2p12	NA	Name=PAX5-N19,PAX5-C20	Name=4	NA	rs2228460	0.29	0.29	0.244	0.237021	0.3519	0.3403	0.4236	0.0477	0.136	0.34	0.35	0.4	0.05	0.2953	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.455386	1.455386	NA	0.337673	0.087477	NA	0.188	NA	7.6817936
884	1	205240251	205240251	C	T	exonic	TMCC2	NA	synonymous SNV	TMCC2:NM_001242925:exon4:c.C1452T:p.Y484Y,TMCC2:NM_014858:exon4:c.C1686T:p.Y562Y	exonic	ENSG00000133069	NA	synonymous SNV	ENSG00000133069:ENST00000329800:exon3:c.C966T:p.Y322Y,ENSG00000133069:ENST00000330675:exon3:c.C1011T:p.Y337Y,ENSG00000133069:ENST00000358024:exon4:c.C1686T:p.Y562Y,ENSG00000133069:ENST00000545499:exon4:c.C1452T:p.Y484Y	Score=556;Name=lod=243	NA	1q32.1	NA	Name=STAT3,c-Jun,JunD,USF2,Max	Name=96	NA	rs1668867	0.21	0.21	0.221	0.161941	0.3549	0.0516	0.1931	0.1483	0.0736	0.36	0.05	0.24	0.14	0.2759	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.41741	NA	NA	0.355116	0.185429	NA	0.362	NA	7.6807506
884	11	125891269	125891269	C	T	exonic	CDON	NA	nonsynonymous SNV	CDON:NM_001243597:exon3:c.G223A:p.V75I,CDON:NM_016952:exon3:c.G223A:p.V75I	exonic	ENSG00000064309	NA	nonsynonymous SNV	ENSG00000064309:ENST00000263577:exon3:c.G223A:p.V75I,ENSG00000064309:ENST00000392693:exon3:c.G223A:p.V75I,ENSG00000064309:ENST00000527967:exon3:c.G223A:p.V75I,ENSG00000064309:ENST00000531586:exon3:c.G223A:p.V75I,ENSG00000064309:ENST00000534818:exon3:c.G223A:p.V75I	NA	NA	11q24.2	NA	NA	NA	NA	rs3740912	0.55	0.55	0.554	0.572284	0.5308	0.3452	0.5173	0.8563	0.5041	0.54	0.33	0.56	0.81	0.5573	0.81	0.91	T	0.001	B	0.012	B	0.321	N	1.000	P	0.38	N	1.08	T	-0.960	T	0.000	T	0.115	-1.905	0.008	1.84	0.052	1.485	4.752	-1.905451	NA	1	0.564899	0.801908	ID=COSM147377;OCCURENCE=1(stomach)	0.522	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000081795.1;CLNDSDB=.;CLNDSDBID=.	7.6803344
884	6	29408528	29408528	A	G	exonic	OR10C1	NA	nonsynonymous SNV	OR10C1:NM_013941:exon1:c.A736G:p.M246V	exonic	ENSG00000206474	NA	nonsynonymous SNV	ENSG00000206474:ENST00000444197:exon1:c.A736G:p.M246V	Score=329;Name=lod=29	NA	6p22.1	NA	NA	NA	NA	rs2074464	0.6	0.6	0.594	0.591653	0.5338	0.5774	0.5303	0.6346	0.6513	0.55	0.53	0.56	0.77	0.5705	0.77	1	T	0.0	B	0.0	B	0.003	N	0.000	P	-3.48	N	9.15	T	-1.041	T	0.000	T	0.083	-1.07	0.172	3.49	0.695	0.331	10.662	-1.070339	NA	1	0.549852	0.685308	NA	0.572	NA	7.6791814
884	10	85984323	85984323	G	A	exonic	LRIT2	NA	nonsynonymous SNV	LRIT2:NM_001017924:exon2:c.C658T:p.L220F	exonic	ENSG00000204033	NA	nonsynonymous SNV	ENSG00000204033:ENST00000372113:exon2:c.C658T:p.L220F,ENSG00000204033:ENST00000538192:exon2:c.C658T:p.L220F	NA	NA	10q23.1	NA	NA	NA	NA	rs11200925	0.2	0.2	0.181	0.186901	0.2346	0.2907	0.232	0.0522	0.181	0.22	0.25	0.26	0.07	0.1966	0.26	0.19	T	0.003	B	0.002	B	0.001	N	1.000	P	1.525	L	0.59	T	-1.056	T	0.000	T	0.013	1.949	12.48	-0.067	-0.264	4.488	2.747	1.949383	1.949383	0.18	0.224767	0.086019	NA	0.123	NA	7.6773664
885	7	75442730	75442730	T	G	exonic	CCL24	NA	nonsynonymous SNV	CCL24:NM_002991:exon2:c.A85C:p.I29L	exonic	ENSG00000106178	NA	nonsynonymous SNV	ENSG00000106178:ENST00000222902:exon2:c.A85C:p.I29L,ENSG00000106178:ENST00000416943:exon3:c.A85C:p.I29L	NA	NA	7q11.23	NA	NA	Name=15	NA	rs2302006	0.34	0.34	0.302	0.346046	0.1839	0.5595	0.4063	0.2685	0.3548	0.2	0.57	0.35	0.29	0.2748	0.57	0.52	T	0.004	B	0.01	B	0.496	N	1.000	P	1.135	L	3.84	T	-0.977	T	0.000	T	0.054	0.424	6.304	-0.408	-0.058	0.260	9.527	0.424243	NA	0.49	0.200581	0.279165	NA	0.239	NA	7.6740524
885	1	27480757	27480757	A	G	exonic	SLC9A1	NA	synonymous SNV	SLC9A1:NM_003047:exon1:c.T69C:p.V23V	exonic	ENSG00000090020	NA	synonymous SNV	ENSG00000090020:ENST00000263980:exon1:c.T69C:p.V23V,ENSG00000090020:ENST00000374086:exon1:c.T69C:p.V23V,ENSG00000090020:ENST00000374084:exon3:c.T69C:p.V23V	NA	NA	1p36.11	Score=858;Name=V$RFX1_02	Name=E2F6	Name=20	NA	rs34306208	0.24	0.24	0.218	0.2498	0.332	0.1161	0.1902	0.2534	0.3405	0.35	0.1	0.22	0.26	0.3069	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.814084	NA	NA	0.355349	0.271221	NA	0.217	NA	7.6724176
885	1	206566904	206566904	T	C	exonic	SRGAP2,SRGAP2B,SRGAP2C,SRGAP2D	NA	synonymous SNV	SRGAP2D:NM_001271887:exon3:c.T246C:p.R82R	exonic	ENSG00000163486	NA	synonymous SNV	ENSG00000163486:ENST00000414007:exon3:c.T285C:p.R95R	Score=545;Name=lod=218	NA	1q32.1	NA	NA	NA	NA	rs2919105	NA	NA	0.312	0.494409	0.495	0.4851	0.4942	0.497	0.5	NA	NA	NA	NA	0.4997	0.087	.	.	.	.	.	.	.	.	.	.	.	.	.	.	-0.830	T	0.132	T	.	2.485	14.27	4.65	0.682	0.439	6.930	2.485071	2.485071	NA	NA	NA	NA	0.109	NA	7.6719666
885	19	56719405	56719405	A	C	intergenic	ZSCAN5B,ZSCAN5A	dist=14984;dist=13274	NA	NA	exonic	ENSG00000204532	NA	nonsynonymous SNV	ENSG00000204532:ENST00000376267:exon3:c.A591C:p.E197D,ENSG00000204532:ENST00000534327:exon4:c.A591C:p.E197D	NA	NA	19q13.43	NA	NA	NA	NA	rs12979551	0.6	0.6	0.606	0.564297	0.5746	0.5248	0.6441	0.7322	0.3108	0.58	0.53	0.62	0.73	0.5869	0.73	0.57	T	.	.	.	.	.	.	1.000	P	.	.	3.28	T	-0.978	T	0.000	T	0.104	-1.852	0.009	-2.06	-3.054	-3.729	2.106	-1.851954	NA	0.63	NA	NA	NA	0.601	NA	7.6718334
885	4	156273768	156273768	T	C	exonic	MAP9	NA	nonsynonymous SNV	MAP9:NM_001039580:exon13:c.A1801G:p.N601D	exonic	ENSG00000164114	NA	nonsynonymous SNV	ENSG00000164114:ENST00000311277:exon13:c.A1801G:p.N601D,ENSG00000164114:ENST00000515654:exon13:c.A1729G:p.N577D	Score=601;Name=lod=370	NA	4q32.1	Score=806;Name=V$IRF7_01	NA	NA	NA	rs2305050	0.67	0.67	0.681	0.654153	0.5557	0.7946	0.5346	0.7844	0.5194	0.57	0.8	0.53	0.78	0.5792	0.8	0.83	T	0.0	B	0.001	B	0.589	N	0.000	P	-0.55	N	2.36	T	-1.013	T	0.000	T	0.076	-0.22	2.934	0.287	-0.088	0.139	9.443	-0.220339	NA	1	0.527442	0.724569	NA	0.623	NA	7.6709914
885	1	16356501	16356501	G	A	exonic	CLCNKA	NA	nonsynonymous SNV	CLCNKA:NM_001257139:exon13:c.G1210A:p.A404T,CLCNKA:NM_001042704:exon14:c.G1339A:p.A447T,CLCNKA:NM_004070:exon14:c.G1339A:p.A447T	exonic	ENSG00000186510	NA	nonsynonymous SNV	ENSG00000186510:ENST00000439316:exon13:c.G1210A:p.A404T,ENSG00000186510:ENST00000331433:exon14:c.G1339A:p.A447T,ENSG00000186510:ENST00000420078:exon14:c.G1339A:p.A447T,ENSG00000186510:ENST00000375692:exon15:c.G1339A:p.A447T	NA	NA	1p36.13	Score=1000;Name=V$STAT6_02	NA	NA	NA	rs1805152	0.63	0.63	0.64	0.648562	0.5577	0.7669	0.4467	0.7496	0.6268	0.55	0.75	0.48	0.74	0.5612	0.75	0.17	T	0.006	B	0.008	B	0.019	N	0.984	P	1.075	L	-3.11	D	-0.938	T	0.000	T	0.057	0.249	5.346	0.33	0.223	0.055	5.676	0.249091	NA	0.05	0.544302	0.712665	NA	0.696	NA	7.6701314
885	2	1520676	1520676	T	C	exonic	TPO	NA	nonsynonymous SNV	TPO:NM_175721:exon13:c.T2408C:p.V803A,TPO:NM_175722:exon13:c.T2021C:p.V674A,TPO:NM_001206745:exon14:c.T2369C:p.V790A,TPO:NM_175719:exon14:c.T2369C:p.V790A,TPO:NM_000547:exon15:c.T2540C:p.V847A,TPO:NM_001206744:exon15:c.T2540C:p.V847A	exonic	ENSG00000115705	NA	nonsynonymous SNV	ENSG00000115705:ENST00000425083:exon3:c.T203C:p.V68A,ENSG00000115705:ENST00000469607:exon5:c.T830C:p.V277A,ENSG00000115705:ENST00000422464:exon11:c.T2195C:p.V732A,ENSG00000115705:ENST00000382198:exon13:c.T2021C:p.V674A,ENSG00000115705:ENST00000346956:exon14:c.T2408C:p.V803A,ENSG00000115705:ENST00000349624:exon14:c.T2021C:p.V674A,ENSG00000115705:ENST00000382201:exon14:c.T2369C:p.V790A,ENSG00000115705:ENST00000329066:exon15:c.T2540C:p.V847A,ENSG00000115705:ENST00000337415:exon15:c.T2540C:p.V847A,ENSG00000115705:ENST00000345913:exon15:c.T2540C:p.V847A	NA	NA	2p25.3	NA	NA	NA	NA	rs1126799	0.61	0.61	0.629	0.663938	0.5417	0.5833	0.6037	0.8283	0.6933	0.52	0.6	0.58	0.79	0.5898	0.79	1	T	0.0	B	0.001	B	0.991	N	0.993	P	-1.645	N	0.71	T	-1.008	T	0.000	T	0.482	-1.961	0.007	4.6	1.364	0.609	8.858	-1.960539	NA	1	0.532326	0.771221	ID=COSM148793;OCCURENCE=1(stomach)	0.645	NA	7.6695074
885	14	39722023	39722023	G	C	exonic	MIA2	NA	nonsynonymous SNV	MIA2:NM_054024:exon5:c.G1639C:p.D547H	exonic	ENSG00000150526	NA	nonsynonymous SNV	ENSG00000150526:ENST00000280082:exon5:c.G1639C:p.D547H	NA	NA	14q21.1	NA	Name=TAL1_(SC-12984)	NA	NA	rs10134365	0.31	0.31	0.315	0.310703	0.2127	0.502	0.2032	0.4039	0.1646	0.2	0.51	0.22	0.33	0.2422	0.51	.	.	0.002	B	0.004	B	0.455	N	1.000	P	.	.	0.88	T	-0.903	T	0.000	T	0.009	0.585	7.156	-0.683	0.295	0.925	4.261	0.584811	NA	0.03	0.209467	0.400136	NA	0.254	NA	7.6689664
885	20	1896059	1896059	G	A	exonic	SIRPA	NA	nonsynonymous SNV	SIRPA:NM_001040023:exon2:c.G394A:p.V132M,SIRPA:NM_001040022:exon3:c.G394A:p.V132M,SIRPA:NM_080792:exon3:c.G394A:p.V132M	exonic	ENSG00000198053	NA	nonsynonymous SNV	ENSG00000198053:ENST00000358771:exon2:c.G394A:p.V132M,ENSG00000198053:ENST00000356025:exon3:c.G394A:p.V132M,ENSG00000198053:ENST00000400068:exon3:c.G394A:p.V132M	NA	NA	20p13	NA	NA	NA	NA	rs115287948	NA	NA	0.166	0.409345	0.3171	0.625	0.4222	0.2761	0.453	NA	NA	NA	NA	0.3473	NA	0.24	T	0.188	B	0.084	B	0.008	N	1.000	P	0.835	L	-0.13	T	-0.960	T	0.156	T	0.175	1.059	9.326	-2.28	-0.198	-0.421	9.806	1.059262	NA	0.13	NA	NA	ID=COSM1410604;OCCURENCE=1(large_intestine)	NA	NA	7.6689334
885	9	39103743	39103743	C	T	exonic	CNTNAP3	NA	nonsynonymous SNV	CNTNAP3:NM_033655:exon16:c.G2534A:p.R845H	exonic	ENSG00000106714	NA	nonsynonymous SNV	ENSG00000106714:ENST00000358144:exon14:c.G2270A:p.R757H,ENSG00000106714:ENST00000297668:exon16:c.G2534A:p.R845H,ENSG00000106714:ENST00000377656:exon16:c.G2531A:p.R844H	NA	NA	9p13.1	Score=825;Name=V$RFX1_01	NA	NA	NA	rs7852039	0.2	0.2	0.179	0.186502	0.2376	0.3036	0.1354	0.062	0.2178	0.25	0.29	0.16	0.05	0.211	0.29	0.51	T	0.174	B	0.112	B	.	.	1.000	P	1.325	L	0.97	T	-0.970	T	0.000	T	0.069	1.583	11.25	-1.29	-0.130	-0.236	3.490	1.582659	1.582659	0.1	0.216279	0.08897	NA	0.232	NA	7.6684544
885	2	20823724	20823724	T	C	exonic	HS1BP3	NA	synonymous SNV	HS1BP3:NM_022460:exon6:c.A852G:p.P284P	exonic	ENSG00000118960	NA	synonymous SNV	ENSG00000118960:ENST00000458740:exon3:c.A309G:p.P103P,ENSG00000118960:ENST00000304031:exon6:c.A852G:p.P284P	NA	NA	2p24.1	NA	NA	Name=3	NA	rs6531248	1	1	0.994	0.996206	1	1	0.9986	0.9864	1	1	1	1	0.99	0.9984	1	.	.	.	.	.	.	.	.	0.008	P	.	.	.	.	-1.039	T	0.000	T	.	0.222	5.2	-8.91	-3.351	-4.218	0.193	0.222413	NA	NA	0.999884	0.979573	NA	1	NA	7.6683826
885	21	47821588	47821588	A	G	exonic	PCNT	NA	nonsynonymous SNV	PCNT:NM_006031:exon26:c.A4915G:p.I1639V	exonic	ENSG00000160299	NA	nonsynonymous SNV	ENSG00000160299:ENST00000359568:exon26:c.A4915G:p.I1639V	NA	NA	21q22.3	NA	NA	NA	NA	rs6518291	0.3	0.3	0.309	0.334665	0.2167	0.1935	0.2752	0.5862	0.3037	0.23	0.2	0.24	0.58	0.2494	0.58	0.3	T	0.0	B	0.0	B	0.065	N	1.000	P	-1.12	N	0.6	T	-0.933	T	0.000	T	0.011	-0.875	0.492	1.8	-0.135	1.769	6.033	-0.875115	NA	1	0.199767	0.53586	NA	0.341	NA	7.6674664
885	1	158906715	158906715	C	T	exonic	PYHIN1	NA	synonymous SNV	PYHIN1:NM_152501:exon2:c.C15T:p.Y5Y,PYHIN1:NM_198928:exon2:c.C15T:p.Y5Y,PYHIN1:NM_198929:exon2:c.C15T:p.Y5Y,PYHIN1:NM_198930:exon2:c.C15T:p.Y5Y	exonic	ENSG00000163564	NA	synonymous SNV	ENSG00000163564:ENST00000368135:exon2:c.C15T:p.Y5Y,ENSG00000163564:ENST00000368138:exon2:c.C15T:p.Y5Y,ENSG00000163564:ENST00000368140:exon2:c.C15T:p.Y5Y,ENSG00000163564:ENST00000392252:exon2:c.C15T:p.Y5Y,ENSG00000163564:ENST00000392254:exon2:c.C15T:p.Y5Y,ENSG00000163564:ENST00000458222:exon3:c.C15T:p.Y5Y	NA	NA	1q23.1	Score=891;Name=V$EVI1_06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.838178	NA	NA	NA	NA	NA	NA	NA	7.6666666
885	2	55476582	55476582	T	C	exonic	MTIF2	NA	synonymous SNV	MTIF2:NM_002453:exon9:c.A930G:p.V310V,MTIF2:NM_001005369:exon10:c.A930G:p.V310V	exonic	ENSG00000085760	NA	synonymous SNV	ENSG00000085760:ENST00000403721:exon8:c.A930G:p.V310V,ENSG00000085760:ENST00000263629:exon9:c.A930G:p.V310V,ENSG00000085760:ENST00000394600:exon10:c.A930G:p.V310V	NA	NA	2p16.1	Score=824;Name=V$PAX3_01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.408705	1.408705	NA	NA	NA	NA	NA	NA	7.6666666
885	2	120849134	120849134	G	A	exonic	EPB41L5	NA	synonymous SNV	EPB41L5:NM_001184937:exon13:c.G1047A:p.G349G,EPB41L5:NM_001184938:exon13:c.G1047A:p.G349G,EPB41L5:NM_001184939:exon13:c.G1047A:p.G349G,EPB41L5:NM_020909:exon13:c.G1047A:p.G349G	exonic	ENSG00000115109	NA	synonymous SNV	ENSG00000115109:ENST00000452780:exon12:c.G1047A:p.G349G,ENSG00000115109:ENST00000263713:exon13:c.G1047A:p.G349G,ENSG00000115109:ENST00000331393:exon13:c.G1047A:p.G349G,ENSG00000115109:ENST00000443124:exon13:c.G1047A:p.G349G,ENSG00000115109:ENST00000443902:exon13:c.G1047A:p.G349G	Score=587;Name=lod=325	NA	2q14.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.899925	NA	NA	NA	NA	NA	NA	NA	7.6666666
885	6	51893037	51893037	G	T	exonic	PKHD1	NA	synonymous SNV	PKHD1:NM_138694:exon30:c.C3477A:p.G1159G,PKHD1:NM_170724:exon30:c.C3477A:p.G1159G	exonic	ENSG00000170927	NA	synonymous SNV	ENSG00000170927:ENST00000340994:exon30:c.C3477A:p.G1159G,ENSG00000170927:ENST00000371117:exon30:c.C3477A:p.G1159G	Score=309;Name=lod=24	NA	6p12.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.553054	NA	NA	NA	NA	NA	NA	NA	7.6666666
885	7	20449239	20449239	A	G	exonic	ITGB8	NA	synonymous SNV	ITGB8:NM_002214:exon13:c.A2025G:p.E675E	exonic	ENSG00000105855	NA	synonymous SNV	ENSG00000105855:ENST00000222573:exon13:c.A2025G:p.E675E,ENSG00000105855:ENST00000537992:exon14:c.A1620G:p.E540E	Score=632;Name=lod=494	NA	7p21.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.863262	NA	NA	NA	NA	NA	NA	NA	7.6666666
885	7	76631549	76631549	A	G	ncRNA_exonic	DTX2P1-UPK3BP1-PMS2P11	NA	NA	NA	ncRNA_exonic	ENSG00000186704,ENSG00000265479	NA	NA	NA	Score=391;Name=lod=52	NA	7q11.23	NA	Name=c-Myc,ERalpha_a	Name=4	NA	rs7803074	0.33	0.33	0.305	NA	NA	NA	NA	NA	NA	0.29	0.25	0.28	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.450048	NA	0	NA	NA	ID=COSM453409;OCCURENCE=1(breast),1(lung)	0.123	NA	7.6666666
885	9	2039575	2039575	C	T	exonic	SMARCA2	NA	synonymous SNV	SMARCA2:NM_003070:exon4:c.C465T:p.A155A,SMARCA2:NM_139045:exon4:c.C465T:p.A155A	exonic	ENSG00000080503	NA	synonymous SNV	ENSG00000080503:ENST00000382194:exon3:c.C465T:p.A155A,ENSG00000080503:ENST00000349721:exon4:c.C465T:p.A155A,ENSG00000080503:ENST00000357248:exon4:c.C465T:p.A155A,ENSG00000080503:ENST00000382203:exon4:c.C465T:p.A155A,ENSG00000080503:ENST00000450198:exon4:c.C465T:p.A155A	Score=460;Name=lod=99	NA	9p24.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.494421	1.494421	NA	NA	NA	NA	NA	NA	7.6666666
885	9	68427877	68427877	G	A	ncRNA_exonic	LOC642236	NA	NA	NA	ncRNA_exonic	ENSG00000215548	NA	NA	NA	Score=518;Name=lod=170	NA	9q13	Score=842;Name=V$IRF7_01	NA	Name=20	NA	rs4066495	NA	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.075382	NA	NA	NA	NA	NA	NA	NA	7.6666666
885	12	69198967	69198967	C	T	ncRNA_exonic	LOC100130075	NA	NA	NA	ncRNA_exonic	ENSG00000256678	NA	NA	NA	Score=503;Name=lod=148	NA	12q15	NA	NA	Name=2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.406406	NA	NA	NA	NA	NA	NA	NA	7.6666666
885	20	29638018	29638018	C	T	ncRNA_exonic	MLLT10P1	NA	NA	NA	ncRNA_exonic	ENSG00000238151	NA	NA	NA	Score=399;Name=lod=56	NA	20q11.21	NA	Name=BRF1,TAF1,BDP1,ZZZ3,BRF2	Name=87	NA	rs75079415	NA	NA	0.345	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.074546	NA	NA	NA	NA	NA	0.21	NA	7.6666666
885	3	47088028	47088028	G	A	exonic	SETD2	NA	synonymous SNV	SETD2:NM_014159:exon16:c.C7047T:p.A2349A	exonic	ENSG00000181555	NA	synonymous SNV	ENSG00000181555:ENST00000409792:exon16:c.C7047T:p.A2349A	NA	NA	3p21.31	Score=855;Name=V$AP4_01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00000824	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.726036	NA	NA	NA	NA	NA	NA	NA	7.6666584
885	16	2813961	2813961	A	T	exonic	SRRM2	NA	synonymous SNV	SRRM2:NM_016333:exon11:c.A3432T:p.S1144S	exonic	ENSG00000167978	NA	synonymous SNV	ENSG00000167978:ENST00000301740:exon11:c.A3432T:p.S1144S	NA	NA	16p13.3	NA	Name=Pol2(phosphoS2)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000008264	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.760836	NA	NA	NA	NA	NA	NA	NA	7.6666583
885	17	79164752	79164752	C	T	exonic	AZI1	NA	synonymous SNV	AZI1:NM_001009811:exon22:c.G2790A:p.Q930Q,AZI1:NM_014984:exon23:c.G2898A:p.Q966Q	exonic	ENSG00000141577	NA	synonymous SNV	ENSG00000141577:ENST00000573053:exon10:c.G1230A:p.Q410Q,ENSG00000141577:ENST00000374782:exon22:c.G2790A:p.Q930Q,ENSG00000141577:ENST00000575907:exon22:c.G2799A:p.Q933Q,ENSG00000141577:ENST00000269392:exon23:c.G2907A:p.Q969Q,ENSG00000141577:ENST00000450824:exon23:c.G2898A:p.Q966Q	Score=358;Name=lod=38	NA	17q25.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000008514	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.850059	NA	NA	NA	NA	NA	NA	NA	7.6666581
885	11	64137218	64137218	C	T	exonic	RPS6KA4	NA	synonymous SNV	RPS6KA4:NM_001006944:exon14:c.C1632T:p.I544I,RPS6KA4:NM_003942:exon14:c.C1650T:p.I550I	exonic	ENSG00000162302	NA	synonymous SNV	ENSG00000162302:ENST00000334205:exon14:c.C1650T:p.I550I,ENSG00000162302:ENST00000528057:exon14:c.C1629T:p.I543I,ENSG00000162302:ENST00000530504:exon14:c.C1584T:p.I528I	Score=561;Name=lod=253	NA	11q13.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00000932	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.402342	1.402342	NA	NA	NA	NA	NA	NA	7.6666573
885	16	1810459	1810459	C	T	exonic	MAPK8IP3	NA	synonymous SNV	MAPK8IP3:NM_001040439:exon11:c.C1362T:p.G454G,MAPK8IP3:NM_015133:exon12:c.C1380T:p.G460G	exonic	ENSG00000138834	NA	synonymous SNV	ENSG00000138834:ENST00000356010:exon11:c.C1362T:p.G454G,ENSG00000138834:ENST00000250894:exon12:c.C1380T:p.G460G	Score=549;Name=lod=228	NA	16p13.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00004151	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.711969	NA	NA	NA	NA	NA	NA	NA	7.6666251
885	3	97680493	97680493	C	A	exonic	MINA	NA	synonymous SNV	MINA:NM_001042533:exon3:c.G492T:p.S164S,MINA:NM_001261829:exon3:c.G492T:p.S164S,MINA:NM_032778:exon3:c.G492T:p.S164S,MINA:NM_153182:exon3:c.G492T:p.S164S	exonic	ENSG00000170854	NA	synonymous SNV	ENSG00000170854:ENST00000507612:exon1:c.G30T:p.S10S,ENSG00000170854:ENST00000514314:exon2:c.G492T:p.S164S,ENSG00000170854:ENST00000330299:exon3:c.G492T:p.S164S,ENSG00000170854:ENST00000333396:exon3:c.G492T:p.S164S,ENSG00000170854:ENST00000360258:exon3:c.G492T:p.S164S,ENSG00000170854:ENST00000394198:exon3:c.G492T:p.S164S	NA	NA	3q11.2	Score=828;Name=V$FREAC4_01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0000579	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.212759	NA	NA	NA	NA	NA	NA	NA	7.6666087
885	3	48699636	48699636	C	T	exonic	CELSR3	NA	synonymous SNV	CELSR3:NM_001407:exon1:c.G432A:p.R144R	exonic	ENSG00000008300	NA	synonymous SNV	ENSG00000008300:ENST00000164024:exon1:c.G432A:p.R144R,ENSG00000008300:ENST00000544264:exon1:c.G432A:p.R144R	NA	NA	3p21.31	NA	Name=NRSF	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00006836	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.179707	NA	NA	NA	NA	NA	NA	NA	7.6665982
885	15	27572153	27572153	C	T	exonic	GABRG3	NA	synonymous SNV	GABRG3:NM_001270873:exon4:c.C468T:p.D156D,GABRG3:NM_033223:exon4:c.C468T:p.D156D	exonic	ENSG00000182256	NA	synonymous SNV	ENSG00000182256:ENST00000554696:exon2:c.C294T:p.D98D,ENSG00000182256:ENST00000333743:exon4:c.C468T:p.D156D,ENSG00000182256:ENST00000555083:exon4:c.C468T:p.D156D	Score=512;Name=lod=161	NA	15q12	Score=805;Name=V$PBX1_02	NA	NA	NA	rs376676320	NA	NA	NA	0.000199681	NA	NA	0.0014	NA	NA	NA	NA	NA	NA	0.0003	0.0003	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.536718	NA	NA	0	0.000257	ID=COSM1372205;OCCURENCE=1(large_intestine)	NA	NA	7.6663666
885	8	69104722	69104722	C	T	exonic	PREX2	NA	synonymous SNV	PREX2:NM_024870:exon37:c.C4566T:p.G1522G	exonic	ENSG00000046889	NA	synonymous SNV	ENSG00000046889:ENST00000288368:exon37:c.C4566T:p.G1522G	NA	NA	8q13.2	NA	Name=HA-E2F1,E2F6_(H-50)	Name=6	NA	rs61753705	0.0009	0.0009	NA	0.000399361	NA	NA	0.0029	NA	NA	NA	NA	0.01	NA	0.0004	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.632216	NA	NA	NA	NA	NA	NA	NA	7.6662666
885	5	148689617	148689617	C	T	exonic	AFAP1L1	NA	synonymous SNV	AFAP1L1:NM_001146337:exon8:c.C846T:p.H282H,AFAP1L1:NM_152406:exon8:c.C846T:p.H282H	exonic	ENSG00000157510	NA	synonymous SNV	ENSG00000157510:ENST00000296721:exon8:c.C846T:p.H282H,ENSG00000157510:ENST00000515000:exon8:c.C846T:p.H282H	Score=587;Name=lod=325	NA	5q32	Score=956;Name=V$AP4_Q5	NA	NA	NA	rs139614291	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0001	0.0005	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.152516	NA	NA	0.000349	0.000454	NA	NA	NA	7.6662176
885	19	18123757	18123757	G	A	exonic	ARRDC2	NA	synonymous SNV	ARRDC2:NM_001025604:exon8:c.G1191A:p.P397P,ARRDC2:NM_015683:exon8:c.G1206A:p.P402P	exonic	ENSG00000105643	NA	synonymous SNV	ENSG00000105643:ENST00000222250:exon8:c.G1206A:p.P402P,ENSG00000105643:ENST00000379656:exon8:c.G1191A:p.P397P	Score=470;Name=lod=108	NA	19p13.11	Score=964;Name=V$TCF11_01	NA	NA	NA	rs140570800	NA	NA	NA	0.000199681	NA	NA	0.0014	NA	NA	NA	NA	NA	NA	0.0002	0.0003	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.279701	NA	NA	0.000349	0	NA	NA	NA	7.6661176
885	2	214012508	214012508	C	T	exonic	IKZF2	NA	synonymous SNV	IKZF2:NM_016260:exon3:c.G63A:p.E21E,IKZF2:NM_001079526:exon4:c.G63A:p.E21E	exonic	ENSG00000030419	NA	synonymous SNV	ENSG00000030419:ENST00000374326:exon2:c.G63A:p.E21E,ENSG00000030419:ENST00000374327:exon2:c.G63A:p.E21E,ENSG00000030419:ENST00000412444:exon2:c.G63A:p.E21E,ENSG00000030419:ENST00000413091:exon2:c.G63A:p.E21E,ENSG00000030419:ENST00000421754:exon2:c.G63A:p.E21E,ENSG00000030419:ENST00000431520:exon2:c.G63A:p.E21E,ENSG00000030419:ENST00000439848:exon2:c.G63A:p.E21E,ENSG00000030419:ENST00000451136:exon2:c.G63A:p.E21E,ENSG00000030419:ENST00000453575:exon2:c.G63A:p.E21E,ENSG00000030419:ENST00000342002:exon3:c.G81A:p.E27E,ENSG00000030419:ENST00000433134:exon3:c.G81A:p.E27E,ENSG00000030419:ENST00000442445:exon3:c.G81A:p.E27E,ENSG00000030419:ENST00000452786:exon3:c.G63A:p.E21E,ENSG00000030419:ENST00000457361:exon3:c.G63A:p.E21E,ENSG00000030419:ENST00000374319:exon4:c.G63A:p.E21E,ENSG00000030419:ENST00000434687:exon4:c.G63A:p.E21E	Score=672;Name=lod=716	NA	2q34	NA	Name=USF-1,TBP,USF2,Pol2,YY1,YY1_(C-20),Pol2-4H8	Name=13	NA	rs6709554	0.18	0.18	0.16	0.152756	0.3509	0.003	0.2363	0.0522	0.18	0.35	0.0035	0.26	0.04	0.2751	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.124453	NA	NA	0.374767	0.08443	NA	0.196	NA	7.6658996
885	3	125643903	125643903	T	C	ncRNA_exonic	FAM86JP	NA	NA	NA	ncRNA_exonic	ENSG00000171084	NA	NA	NA	Score=289;Name=lod=20	NA	3q21.2	NA	Name=ERalpha_a	NA	NA	NA	NA	NA	NA	0.00279553	0.001	0.004	0.0014	0.0015	0.0061	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.606477	NA	NA	NA	NA	NA	NA	NA	7.6656666
885	3	125643904	125643904	G	A	ncRNA_exonic	FAM86JP	NA	NA	NA	ncRNA_exonic	ENSG00000171084	NA	NA	NA	Score=289;Name=lod=20	NA	3q21.2	NA	Name=ERalpha_a	NA	NA	NA	NA	NA	NA	0.00279553	0.001	0.004	0.0014	0.0015	0.0061	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.285094	NA	NA	NA	NA	NA	NA	NA	7.6656666
885	9	114131316	114131316	T	C	exonic	KIAA0368	NA	synonymous SNV	KIAA0368:NM_001080398:exon47:c.A5646G:p.Q1882Q	exonic	ENSG00000136813	NA	synonymous SNV	ENSG00000136813:ENST00000338205:exon45:c.A5112G:p.Q1704Q,ENSG00000136813:ENST00000259335:exon47:c.A5646G:p.Q1882Q	Score=443;Name=lod=84	NA	9q31.3	NA	NA	NA	NA	NA	NA	NA	NA	0.000199681	0.001	NA	NA	NA	NA	NA	NA	NA	NA	0.00001755	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.196511	NA	NA	NA	NA	NA	NA	NA	7.665649
885	9	138651555	138651555	G	A	exonic	KCNT1	NA	synonymous SNV	KCNT1:NM_001272003:exon10:c.G750A:p.A250A,KCNT1:NM_020822:exon11:c.G885A:p.A295A	exonic	ENSG00000107147	NA	synonymous SNV	ENSG00000107147:ENST00000473941:exon10:c.G726A:p.A242A,ENSG00000107147:ENST00000487664:exon10:c.G750A:p.A250A,ENSG00000107147:ENST00000491806:exon10:c.G786A:p.A262A,ENSG00000107147:ENST00000263604:exon11:c.G828A:p.A276A,ENSG00000107147:ENST00000298480:exon11:c.G885A:p.A295A,ENSG00000107147:ENST00000371757:exon11:c.G885A:p.A295A,ENSG00000107147:ENST00000486577:exon11:c.G768A:p.A256A,ENSG00000107147:ENST00000488444:exon11:c.G828A:p.A276A,ENSG00000107147:ENST00000490355:exon11:c.G828A:p.A276A	NA	NA	9q34.3	Score=772;Name=V$PAX5_02	Name=JunD,ZNF263	NA	NA	rs142756900	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0006	0.0006	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.564634	NA	NA	0.000581	0	NA	NA	NA	7.6654856
885	20	23065209	23065209	G	A	exonic	CD93	NA	nonsynonymous SNV	CD93:NM_012072:exon1:c.C1621T:p.P541S	exonic	ENSG00000125810	NA	nonsynonymous SNV	ENSG00000125810:ENST00000246006:exon1:c.C1621T:p.P541S	NA	NA	20p11.21	NA	NA	NA	NA	rs3746731	0.53	0.53	0.521	0.541134	0.5378	0.6468	0.6254	0.3427	0.6442	0.52	0.67	0.59	0.35	0.5635	0.67	0.42	T	0.192	B	0.086	B	0.001	N	1.000	P	1.32	L	-1.43	T	-0.903	T	0.000	T	0.066	1.911	12.35	3.84	0.778	2.358	9.364	1.910938	1.910938	0.58	0.566628	0.367227	NA	0.529	NA	7.6654054
885	9	80144114	80144114	C	T	exonic	GNA14	NA	synonymous SNV	GNA14:NM_004297:exon2:c.G180A:p.G60G	exonic	ENSG00000156049	NA	synonymous SNV	ENSG00000156049:ENST00000341700:exon2:c.G180A:p.G60G	Score=622;Name=lod=448	NA	9q21.2	Score=866;Name=V$HAND1E47_01	NA	NA	NA	rs147709559	NA	NA	NA	0.000599042	0.001	NA	0.0029	NA	NA	NA	NA	NA	NA	0.0003	0.0001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.419288	1.419288	NA	0.000116	0	NA	NA	NA	7.6652506
885	14	62212486	62212486	T	C	exonic	HIF1A	NA	synonymous SNV	HIF1A:NM_001243084:exon14:c.T2352C:p.S784S,HIF1A:NM_001530:exon14:c.T2280C:p.S760S	exonic	ENSG00000100644	NA	synonymous SNV	ENSG00000100644:ENST00000337138:exon14:c.T2280C:p.S760S,ENSG00000100644:ENST00000394997:exon14:c.T2283C:p.S761S,ENSG00000100644:ENST00000539097:exon14:c.T2352C:p.S784S,ENSG00000100644:ENST00000557538:exon14:c.T2103C:p.S701S	Score=607;Name=lod=391	NA	14q23.2	Score=820;Name=V$OCT1_04	NA	NA	NA	rs149019950	0.0005	0.0005	NA	0.000599042	0.001	NA	0.0014	NA	0.001	NA	NA	0.0028	NA	0.0004	0.0028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.340799	1.340799	NA	0.000233	0.000227	NA	NA	NA	7.6650336
885	2	196774877	196774877	A	G	exonic	DNAH7	NA	synonymous SNV	DNAH7:NM_018897:exon25:c.T3978C:p.P1326P	exonic	ENSG00000118997	NA	synonymous SNV	ENSG00000118997:ENST00000312428:exon25:c.T3978C:p.P1326P	Score=501;Name=lod=145	NA	2q32.3	Score=931;Name=V$LMO2COM_01	NA	NA	NA	rs200575809	NA	NA	NA	0.000199681	0.001	NA	NA	NA	NA	NA	NA	NA	NA	0.0003	0.0004	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.208386	NA	NA	0.000365	0	NA	NA	NA	7.6650016
886	4	73930519	73930519	G	A	exonic	COX18	NA	synonymous SNV	COX18:NM_173827:exon4:c.C696T:p.G232G	exonic	ENSG00000163626	NA	synonymous SNV	ENSG00000163626:ENST00000295890:exon4:c.C696T:p.G232G,ENSG00000163626:ENST00000507544:exon4:c.C699T:p.G233G	Score=501;Name=lod=145	NA	4q13.3	NA	NA	Name=15	NA	rs61741433	0.0027	0.0027	0.004	0.00259585	NA	NA	0.0029	0.0083	NA	NA	NA	0.0028	0.01	0.0015	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.532201	NA	NA	0.000233	0.011348	NA	NA	NA	7.6649336
886	10	85981842	85981842	A	G	exonic	LRIT2	NA	nonsynonymous SNV	LRIT2:NM_001017924:exon3:c.T1487C:p.V496A	exonic	ENSG00000204033	NA	nonsynonymous SNV	ENSG00000204033:ENST00000372113:exon3:c.T1487C:p.V496A,ENSG00000204033:ENST00000538192:exon4:c.T1517C:p.V506A	NA	NA	10q23.1	NA	NA	NA	NA	rs12217769	0.22	0.22	0.189	0.207867	0.2346	0.3452	0.2911	0.0522	0.1902	0.22	0.31	0.28	0.07	0.2128	0.31	0.53	T	0.019	B	0.006	B	0.666	N	1.000	P	0	N	2.32	T	-0.902	T	0.000	T	0.133	-2.043	0.006	2.88	0.535	0.736	8.319	-2.043231	NA	0.35	0.221163	0.086512	NA	0.13	NA	7.6647704
886	6	49814239	49814239	G	A	exonic	CRISP1	NA	synonymous SNV	CRISP1:NM_001131:exon5:c.C429T:p.Y143Y,CRISP1:NM_001205220:exon5:c.C429T:p.Y143Y,CRISP1:NM_170609:exon5:c.C429T:p.Y143Y	exonic	ENSG00000124812	NA	synonymous SNV	ENSG00000124812:ENST00000329411:exon4:c.C429T:p.Y143Y,ENSG00000124812:ENST00000355791:exon4:c.C429T:p.Y143Y,ENSG00000124812:ENST00000335847:exon5:c.C429T:p.Y143Y,ENSG00000124812:ENST00000505118:exon5:c.C429T:p.Y143Y,ENSG00000124812:ENST00000507853:exon5:c.C429T:p.Y143Y,ENSG00000124812:ENST00000536021:exon5:c.C429T:p.Y143Y	Score=383;Name=lod=48	NA	6p12.3	NA	Name=TAL1_(SC-12984)	NA	NA	rs138679779	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0006	0.0014	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.660061	NA	NA	0.001395	0.000454	NA	NA	NA	7.6646716
886	1	55349318	55349318	G	A	exonic	DHCR24	NA	synonymous SNV	DHCR24:NM_014762:exon2:c.C360T:p.D120D	exonic	ENSG00000116133	NA	synonymous SNV	ENSG00000116133:ENST00000371269:exon2:c.C360T:p.D120D,ENSG00000116133:ENST00000535035:exon2:c.C237T:p.D79D	Score=622;Name=lod=451	NA	1p32.3	Score=791;Name=V$CART1_01	NA	NA	NA	rs61733134	0.01	0.01	0.006	0.0071885	NA	NA	0.0014	0.0265	NA	NA	NA	NA	0.02	0.0021	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.244873	1.244873	NA	0.000349	0.020654	NA	0.022	NA	7.6642176
886	8	22974450	22974450	T	C	exonic	TNFRSF10C	NA	nonsynonymous SNV	TNFRSF10C:NM_003841:exon5:c.T686C:p.I229T	exonic	ENSG00000173535	NA	nonsynonymous SNV	ENSG00000173535:ENST00000540813:exon4:c.T380C:p.I127T,ENSG00000173535:ENST00000356864:exon5:c.T686C:p.I229T	Score=284;Name=lod=19	NA	8p21.3	NA	NA	NA	NA	rs9644063	0.77	0.77	0.676	0.769169	0.7972	0.8115	0.8689	0.5991	0.8558	0.79	0.85	0.86	0.58	0.0586	0.86	1	T	0.0	B	0.0	B	0.910	U	0.000	P	-0.805	N	1.44	T	-0.967	T	0.000	T	0.038	-0.272	2.696	0.177	-0.731	-2.796	4.563	-0.27204	NA	1	0.813445	0.640944	NA	0.051	NA	7.6640884
886	1	205628425	205628425	G	A	exonic	SLC45A3	NA	synonymous SNV	SLC45A3:NM_033102:exon5:c.C1599T:p.V533V	exonic	ENSG00000158715	NA	synonymous SNV	ENSG00000158715:ENST00000367145:exon5:c.C1599T:p.V533V	NA	NA	1q32.1	Score=867;Name=V$YY1_01	NA	Name=132	NA	rs143282781	NA	NA	NA	0.000199681	NA	NA	NA	NA	0.001	NA	NA	NA	NA	0.0013	0.0013	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.032311	NA	NA	0.001279	0.000681	NA	NA	NA	7.6640876
886	14	24615435	24615435	T	C	exonic	PSME2	NA	synonymous SNV	PSME2:NM_002818:exon2:c.A63G:p.R21R	exonic	ENSG00000100911	NA	synonymous SNV	ENSG00000100911:ENST00000216802:exon2:c.A63G:p.R21R,ENSG00000100911:ENST00000558273:exon2:c.A63G:p.R21R,ENSG00000100911:ENST00000560370:exon2:c.A63G:p.R21R	Score=505;Name=lod=151	NA	14q12	Score=781;Name=V$STAT5A_02	NA	Name=68	NA	rs4575	0.52	0.52	0.503	0.567891	0.3231	0.6369	0.5447	0.7905	0.4642	0.32	0.6	0.5	0.74	0.4032	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.259252	1.259252	NA	0.276279	0.698139	NA	0.442	NA	7.6640876
886	15	90168108	90168108	C	T	exonic	TICRR	NA	nonsynonymous SNV	TICRR:NM_152259:exon20:c.C4567T:p.R1523C	exonic	ENSG00000140534	NA	nonsynonymous SNV	ENSG00000140534:ENST00000268138:exon20:c.C4567T:p.R1523C,ENSG00000140534:ENST00000560985:exon20:c.C4564T:p.R1522C	NA	Name=Obesity-related traits	15q26.1	NA	NA	NA	NA	rs894157	0.85	0.85	0.866	0.850639	0.8956	0.7153	0.7853	0.9766	0.82	0.9	0.69	0.82	0.97	0.8677	0.97	0.18	T	0.0	B	0.0	B	0.609	N	1.000	P	-0.69	N	3.13	T	-1.043	T	0.000	T	0.053	1.055	9.307	2.63	0.022	2.981	6.427	1.054634	NA	0.13	0.906257	0.960909	ID=COSM147978;OCCURENCE=1(stomach)	0.841	NA	7.6637764
886	15	81605612	81605612	C	T	exonic	STARD5	NA	synonymous SNV	STARD5:NM_181900:exon6:c.G627A:p.K209K	exonic	ENSG00000172345	NA	synonymous SNV	ENSG00000172345:ENST00000302824:exon6:c.G627A:p.K209K	NA	NA	15q25.1	NA	Name=GR,Max,p300,CEBPB,Pol2(b),JunD,STAT3,c-Fos,ERalpha_a,c-Jun	Name=114	NA	rs61659195	0.01	0.01	0.006	0.00778754	NA	NA	NA	0.0295	NA	NA	NA	NA	0.02	0.0028	0.025	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.165718	NA	0.01	0.000116	0.024739	NA	0.014	NA	7.6637506
886	2	71797754	71797754	C	T	exonic	DYSF	NA	synonymous SNV	DYSF:NM_001130976:exon28:c.C3015T:p.P1005P,DYSF:NM_001130977:exon28:c.C3015T:p.P1005P,DYSF:NM_001130984:exon28:c.C3018T:p.P1006P,DYSF:NM_001130986:exon28:c.C3018T:p.P1006P,DYSF:NM_001130455:exon29:c.C3060T:p.P1020P,DYSF:NM_001130978:exon29:c.C3057T:p.P1019P,DYSF:NM_001130980:exon29:c.C3108T:p.P1036P,DYSF:NM_001130981:exon29:c.C3108T:p.P1036P,DYSF:NM_001130983:exon29:c.C3060T:p.P1020P,DYSF:NM_001130985:exon29:c.C3111T:p.P1037P,DYSF:NM_001130987:exon29:c.C3111T:p.P1037P,DYSF:NM_003494:exon29:c.C3057T:p.P1019P,DYSF:NM_001130979:exon30:c.C3150T:p.P1050P,DYSF:NM_001130982:exon30:c.C3153T:p.P1051P	exonic	ENSG00000135636	NA	synonymous SNV	ENSG00000135636:ENST00000409744:exon28:c.C3018T:p.P1006P,ENSG00000135636:ENST00000258104:exon29:c.C3057T:p.P1019P,ENSG00000135636:ENST00000394120:exon29:c.C3060T:p.P1020P,ENSG00000135636:ENST00000409366:exon29:c.C3060T:p.P1020P,ENSG00000135636:ENST00000409582:exon29:c.C3108T:p.P1036P,ENSG00000135636:ENST00000409762:exon29:c.C3108T:p.P1036P,ENSG00000135636:ENST00000410020:exon29:c.C3111T:p.P1037P,ENSG00000135636:ENST00000410041:exon29:c.C3111T:p.P1037P,ENSG00000135636:ENST00000429174:exon29:c.C3057T:p.P1019P,ENSG00000135636:ENST00000409651:exon30:c.C3153T:p.P1051P,ENSG00000135636:ENST00000413539:exon30:c.C3150T:p.P1050P	Score=521;Name=lod=175	NA	2p13.2	Score=834;Name=V$MRF2_01	NA	NA	NA	rs143475751	NA	NA	NA	0.000399361	0.001	NA	0.0014	NA	NA	NA	NA	NA	NA	0.0009	0.001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.36781	NA	NA	0.001047	0	NA	NA	NA	7.6637196
886	5	79351738	79351738	A	G	exonic	THBS4	NA	synonymous SNV	THBS4:NM_003248:exon3:c.A423G:p.L141L	exonic	ENSG00000113296	NA	synonymous SNV	ENSG00000113296:ENST00000350881:exon3:c.A423G:p.L141L,ENSG00000113296:ENST00000511733:exon3:c.A150G:p.L50L	NA	NA	5q14.1	NA	Name=EBF	Name=12	NA	rs17882513	0.0018	0.0018	0.003	0.00339457	0.001	NA	0.0043	0.0098	NA	NA	NA	0.0028	0.01	0.0015	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.651602	NA	NA	0.000581	0.007717	NA	0.007	NA	7.6635856
886	16	23080363	23080363	G	A	exonic	USP31	NA	synonymous SNV	USP31:NM_020718:exon16:c.C3063T:p.S1021S	exonic	ENSG00000103404	NA	synonymous SNV	ENSG00000103404:ENST00000567975:exon2:c.C942T:p.S314S,ENSG00000103404:ENST00000219689:exon16:c.C3063T:p.S1021S	Score=366;Name=lod=41	NA	16p12.2	Score=851;Name=V$FAC1_01	NA	NA	NA	rs146554415	0.0014	0.0014	NA	0.000798722	0.002	NA	0.0029	NA	NA	0.0026	NA	0.0028	NA	0.0006	0.0028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.36519	NA	NA	0.000581	0.000683	NA	NA	NA	7.6634856
886	1	6521701	6521701	C	T	exonic	TNFRSF25	NA	synonymous SNV	TNFRSF25:NM_148970:exon5:c.G498A:p.E166E,TNFRSF25:NM_148966:exon9:c.G936A:p.E312E,TNFRSF25:NM_148967:exon9:c.G912A:p.E304E,TNFRSF25:NM_003790:exon10:c.G1047A:p.E349E,TNFRSF25:NM_148965:exon10:c.G1074A:p.E358E	exonic	ENSG00000215788	NA	synonymous SNV	ENSG00000215788:ENST00000351748:exon5:c.G498A:p.E166E,ENSG00000215788:ENST00000348333:exon9:c.G912A:p.E304E,ENSG00000215788:ENST00000351959:exon9:c.G936A:p.E312E,ENSG00000215788:ENST00000356876:exon10:c.G1047A:p.E349E,ENSG00000215788:ENST00000377782:exon10:c.G1074A:p.E358E	Score=628;Name=lod=477	NA	1p36.31	Score=860;Name=V$P300_01	NA	NA	NA	rs149595085	0.0014	0.0014	NA	0.000399361	0.002	NA	NA	NA	NA	0.0013	NA	NA	0.0041	0.0003	0.0041	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.547896	1.547896	NA	0.001047	0	NA	NA	NA	7.6633196
886	X	2835964	2835964	G	A	exonic	ARSD	NA	synonymous SNV	ARSD:NM_001669:exon5:c.C744T:p.F248F	exonic	ENSG00000006756	NA	synonymous SNV	ENSG00000006756:ENST00000381154:exon5:c.C744T:p.F248F	NA	NA	Xp22.33	NA	Name=CCNT2,YY1,HMGN3	Name=5	NA	rs73632972	NA	NA	0.12798	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0045	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.118953	NA	NA	NA	NA	NA	NA	NA	7.6621666
886	21	31744127	31744127	A	T	exonic	KRTAP13-2	NA	stopgain	KRTAP13-2:NM_181621:exon1:c.T405A:p.C135X	exonic	ENSG00000182816	NA	stopgain	ENSG00000182816:ENST00000399889:exon1:c.T405A:p.C135X	NA	NA	21q22.11	NA	NA	NA	NA	rs877346	0.31	0.31	0.297	0.318091	0.4483	0.2688	0.3473	0.1679	0.4172	0.45	0.23	0.35	0.16	0.4041	0.49	0.24	T	.	.	.	.	0.431	U	0.987	P	.	.	.	.	.	.	.	.	.	1.499	10.96	2.31	0.865	0.246	5.629	1.499213	1.499213	NA	0.485581	0.215161	NA	0.297	NA	7.662019
886	20	36854106	36854106	G	T	exonic	KIAA1755	NA	synonymous SNV	KIAA1755:NM_001029864:exon8:c.C2130A:p.P710P	exonic	ENSG00000149633	NA	synonymous SNV	ENSG00000149633:ENST00000279024:exon8:c.C2130A:p.P710P	Score=507;Name=lod=154	NA	20q11.23	Score=683;Name=V$PPARG_02	NA	NA	NA	rs140170793	0.01	0.01	0.007	0.0101837	0.001	0.0427	0.0014	0.0015	0.0041	NA	0.04	0.0028	0.002	0.0037	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.335567	1.335567	NA	0.000349	0.000454	NA	NA	NA	7.6616176
886	11	5717780	5717780	C	T	exonic	TRIM22	NA	synonymous SNV	TRIM22:NM_001199573:exon2:c.C318T:p.I106I,TRIM22:NM_006074:exon2:c.C318T:p.I106I	exonic	ENSG00000132274	NA	synonymous SNV	ENSG00000132274:ENST00000379965:exon2:c.C318T:p.I106I,ENSG00000132274:ENST00000414641:exon2:c.C318T:p.I106I,ENSG00000132274:ENST00000454828:exon2:c.C318T:p.I106I,ENSG00000132274:ENST00000425490:exon3:c.C318T:p.I106I	NA	NA	11p15.4	Score=820;Name=V$E4BP4_01	NA	Name=7	NA	rs61735271	0.01	0.01	0.002	0.00798722	0.002	NA	0.0115	0.0227	NA	NA	NA	0.02	0.02	0.0024	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.137621	NA	NA	0.000941	0.011516	NA	0.029	NA	7.6613256
886	11	102479669	102479669	G	A	exonic	MMP20	NA	synonymous SNV	MMP20:NM_004771:exon5:c.C810T:p.Y270Y	exonic	ENSG00000137674	NA	synonymous SNV	ENSG00000137674:ENST00000260228:exon5:c.C810T:p.Y270Y	NA	NA	11q22.2	NA	Name=JunD	Name=10	NA	rs11225343	0.02	0.02	0.019	0.0245607	NA	NA	0.0058	0.09	NA	NA	NA	0.01	0.08	0.0066	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.263074	NA	NA	0.000233	0.070586	NA	0.029	NA	7.6598336
886	22	31302233	31302233	T	C	exonic	OSBP2	NA	synonymous SNV	OSBP2:NM_030758:exon14:c.T2658C:p.D886D	exonic	ENSG00000184792	NA	synonymous SNV	ENSG00000184792:ENST00000535268:exon12:c.T1290C:p.D430D,ENSG00000184792:ENST00000401475:exon13:c.T1557C:p.D519D,ENSG00000184792:ENST00000437268:exon13:c.T1887C:p.D629D,ENSG00000184792:ENST00000332585:exon14:c.T2658C:p.D886D,ENSG00000184792:ENST00000407373:exon14:c.T2139C:p.D713D,ENSG00000184792:ENST00000446658:exon14:c.T2655C:p.D885D,ENSG00000184792:ENST00000403222:exon15:c.T2160C:p.D720D	Score=510;Name=lod=158	NA	22q12.2	Score=808;Name=V$OLF1_01	NA	NA	NA	rs3804085	0.47	0.47	0.418	0.477436	0.3191	0.6895	0.3573	0.6059	0.3333	0.31	0.63	0.4	0.59	0.3643	0.63	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.920	T	0.000	T	.	0.786	8.146	0.302	0.007	0.105	10.173	0.786255	NA	NA	0.323765	0.540075	NA	0.428	NA	7.6595016
886	16	16291983	16291983	A	G	exonic	ABCC6	NA	synonymous SNV	ABCC6:NM_001171:exon10:c.T1233C:p.N411N	exonic	ENSG00000091262	NA	synonymous SNV	ENSG00000091262:ENST00000205557:exon10:c.T1233C:p.N411N,ENSG00000091262:ENST00000456970:exon10:c.T1233C:p.N411N	Score=514;Name=lod=164	NA	16p13.11	Score=789;Name=V$XBP1_01	NA	NA	NA	rs9930886	0.29	0.29	0.293	0.282748	0.326	0.3214	0.3127	0.2526	0.2178	0.34	0.27	0.29	0.25	0.3384	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.331035	NA	NA	0.343256	0.254665	NA	0.203	CLINSIG=probable-non-pathogenic;CLNDBN=not_provided;CLNREVSTAT=single;CLNACC=RCV000132638.1;CLNDSDB=.;CLNDSDBID=.	7.6590106
886	17	5085530	5085530	A	G	exonic	ZNF594	NA	synonymous SNV	ZNF594:NM_032530:exon2:c.T2022C:p.H674H	exonic	ENSG00000180626	NA	synonymous SNV	ENSG00000180626:ENST00000399604:exon1:c.T2022C:p.H674H,ENSG00000180626:ENST00000575779:exon2:c.T2022C:p.H674H	Score=352;Name=lod=36	NA	17p13.2	NA	Name=SETDB1,KAP1	NA	NA	rs57456705	0.02	0.02	0.025	0.0273562	NA	NA	0.0029	0.1021	NA	NA	NA	0.0028	0.1	0.0077	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.41587	NA	NA	0.000233	0.07636	NA	0.036	NA	7.6587336
886	10	102762598	102762598	C	T	exonic	LZTS2	NA	synonymous SNV	LZTS2:NM_032429:exon2:c.C303T:p.P101P	exonic	ENSG00000107816	NA	synonymous SNV	ENSG00000107816:ENST00000370220:exon1:c.C303T:p.P101P,ENSG00000107816:ENST00000370223:exon2:c.C303T:p.P101P,ENSG00000107816:ENST00000426584:exon2:c.C303T:p.P101P,ENSG00000107816:ENST00000429732:exon2:c.C303T:p.P101P,ENSG00000107816:ENST00000454422:exon2:c.C303T:p.P101P,ENSG00000107816:ENST00000481129:exon2:c.C303T:p.P101P	Score=403;Name=lod=58	NA	10q24.31	Score=714;Name=V$HOX13_01	NA	NA	NA	rs117876479	0.01	0.01	0.007	0.00638978	0.003	0.0278	0.0014	NA	NA	0.01	0.02	NA	NA	0.0046	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.445005	1.445005	NA	0.000349	0.000227	NA	NA	NA	7.6587176
886	11	16077331	16077331	T	C	exonic	SOX6	NA	synonymous SNV	SOX6:NM_001145811:exon9:c.A1095G:p.E365E,SOX6:NM_017508:exon9:c.A1104G:p.E368E,SOX6:NM_001145819:exon10:c.A1257G:p.E419E,SOX6:NM_033326:exon10:c.A1218G:p.E406E	exonic	ENSG00000110693	NA	synonymous SNV	ENSG00000110693:ENST00000316399:exon9:c.A1218G:p.E406E,ENSG00000110693:ENST00000527619:exon9:c.A1104G:p.E368E,ENSG00000110693:ENST00000528252:exon9:c.A1095G:p.E365E,ENSG00000110693:ENST00000352083:exon10:c.A1218G:p.E406E,ENSG00000110693:ENST00000396356:exon10:c.A1218G:p.E406E,ENSG00000110693:ENST00000528429:exon10:c.A1218G:p.E406E	Score=739;Name=lod=1341	NA	11p15.2	Score=850;Name=V$EVI1_04	NA	NA	NA	rs146022326	0.0032	0.0032	NA	0.00159744	0.004	NA	0.0043	0.0008	NA	0.01	NA	0.01	NA	0.0022	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.763303	NA	NA	0.00198	0.000682	NA	NA	NA	7.6584866
886	19	7594511	7594511	C	T	exonic	MCOLN1	NA	synonymous SNV	MCOLN1:NM_020533:exon11:c.C1272T:p.S424S	exonic	ENSG00000090674	NA	synonymous SNV	ENSG00000090674:ENST00000264079:exon11:c.C1272T:p.S424S	Score=651;Name=lod=588	NA	19p13.2	Score=782;Name=V$PAX2_01	NA	NA	NA	rs147754092	0.0009	0.0009	NA	0.00119808	0.003	NA	NA	0.0015	0.001	0.0026	NA	NA	NA	0.0025	0.003	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.451882	1.451882	NA	0.003023	0.000908	NA	NA	NA	7.6581436
886	21	47545949	47545949	T	C	exonic	COL6A2	NA	synonymous SNV	COL6A2:NM_001849:exon26:c.T2220C:p.D740D,COL6A2:NM_058174:exon26:c.T2220C:p.D740D,COL6A2:NM_058175:exon26:c.T2220C:p.D740D	exonic	ENSG00000142173	NA	synonymous SNV	ENSG00000142173:ENST00000397763:exon25:c.T2220C:p.D740D,ENSG00000142173:ENST00000409416:exon25:c.T2220C:p.D740D,ENSG00000142173:ENST00000300527:exon26:c.T2220C:p.D740D,ENSG00000142173:ENST00000310645:exon26:c.T2220C:p.D740D,ENSG00000142173:ENST00000357838:exon26:c.T2220C:p.D740D	Score=336;Name=lod=31	NA	21q22.3	Score=905;Name=V$RORA1_01	NA	NA	NA	rs61735830	0.0009	0.0009	NA	0.000399361	0.002	NA	NA	NA	NA	0.0026	NA	NA	NA	0.0028	0.0038	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.113945	NA	NA	0.003837	0.000908	NA	NA	NA	7.6580296
886	15	81235363	81235363	G	A	exonic	KIAA1199	NA	synonymous SNV	KIAA1199:NM_018689:exon27:c.G3777A:p.V1259V	exonic	ENSG00000103888	NA	synonymous SNV	ENSG00000103888:ENST00000220244:exon27:c.G3777A:p.V1259V,ENSG00000103888:ENST00000356249:exon28:c.G3777A:p.V1259V,ENSG00000103888:ENST00000394685:exon28:c.G3777A:p.V1259V	Score=295;Name=lod=21	NA	15q25.1	Score=924;Name=V$MYCMAX_02	NA	NA	NA	rs35526763	0.01	0.01	0.011	0.0119808	0.001	NA	0.0144	0.0363	0.001	NA	NA	0.02	0.04	0.0058	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.325088	NA	NA	0.001977	0.040172	NA	0.007	NA	7.6578896
886	22	26860269	26860269	G	C	exonic	HPS4	NA	nonsynonymous SNV	HPS4:NM_152841:exon9:c.C1312G:p.L438V,HPS4:NM_022081:exon11:c.C1327G:p.L443V	exonic	ENSG00000100099	NA	nonsynonymous SNV	ENSG00000100099:ENST00000402105:exon9:c.C1312G:p.L438V,ENSG00000100099:ENST00000398141:exon10:c.C1366G:p.L456V,ENSG00000100099:ENST00000336873:exon11:c.C1327G:p.L443V,ENSG00000100099:ENST00000398145:exon11:c.C1327G:p.L443V,ENSG00000100099:ENST00000422379:exon12:c.C1381G:p.L461V	NA	NA	22q12.1	NA	NA	NA	NA	rs2014410	0.34	0.34	0.349	0.354233	0.3817	0.3026	0.2536	0.2927	0.5337	0.4	0.32	0.26	0.32	0.3829	0.41	0.47	T	0.589	P	0.083	B	0.017	N	1.000	P	1.525	L	1.46	T	-1.039	T	0.000	T	0.189	-0.07	3.661	-3.76	-0.455	-0.433	10.084	-0.069509	NA	0.31	0.411163	0.313436	NA	0.304	NA	7.6575704
886	5	7897319	7897319	G	A	exonic	MTRR	NA	synonymous SNV	MTRR:NM_002454:exon14:c.G1911A:p.A637A,MTRR:NM_024010:exon14:c.G1992A:p.A664A	exonic	ENSG00000124275	NA	synonymous SNV	ENSG00000124275:ENST00000264668:exon14:c.G1992A:p.A664A,ENSG00000124275:ENST00000440940:exon14:c.G1911A:p.A637A	NA	NA	5p15.31	Score=919;Name=V$LMO2COM_01,V$MYOD_01	Name=FOSL1_(SC-183),Rad21,CTCF_(C-20),CTCF,eGFP-JunB,CTCFL_(SC-98982),CTCF_(SC-5916),Egr-1,SMC3_(ab9263),YY1,YY1_(C-20),c-Fos,eGFP-JunD	Name=96	NA	rs1802059	0.25	0.25	0.257	0.266374	0.336	0.13	0.2133	0.2557	0.3875	0.34	0.1	0.23	0.29	0.3142	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.906713	NA	NA	0.358953	0.254653	NA	0.188	NA	7.6575136
886	19	13211508	13211508	C	T	exonic	LYL1	NA	synonymous SNV	LYL1:NM_005583:exon3:c.G390A:p.K130K	exonic	ENSG00000104903	NA	synonymous SNV	ENSG00000104903:ENST00000264824:exon3:c.G390A:p.K130K,ENSG00000104903:ENST00000590974:exon3:c.G168A:p.K56K	Score=573;Name=lod=284	NA	19p13.2	NA	NA	Name=2	NA	rs142687463	0.0005	0.0005	NA	0.00159744	0.001	NA	0.0029	NA	0.0051	NA	NA	0.0028	NA	0.0039	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.374326	1.374326	NA	0.005116	0.001816	ID=COSM565176;OCCURENCE=1(lung)	0.007	NA	7.6566506
886	18	6985270	6985270	C	T	exonic	LAMA1	NA	nonsynonymous SNV	LAMA1:NM_005559:exon39:c.G5626A:p.A1876T	exonic	ENSG00000101680	NA	nonsynonymous SNV	ENSG00000101680:ENST00000389658:exon39:c.G5626A:p.A1876T	NA	NA	18p11.31	NA	NA	NA	NA	rs11664063	0.16	0.16	0.173	0.135583	0.2276	0.1915	0.1383	0.0068	0.1554	0.24	0.17	0.17	0.01	0.1941	0.26	0.53	T	0.152	B	0.013	B	0.057	N	1.000	P	2.085	M	2.25	T	-0.935	T	0.000	T	0.021	0.794	8.183	-0.587	-0.449	0.065	6.143	0.794177	NA	NA	0.25593	0.051067	ID=COSM148380;OCCURENCE=1(stomach)	0.203	NA	7.6557034
886	1	158262459	158262459	C	T	exonic	CD1C	NA	synonymous SNV	CD1C:NM_001765:exon4:c.C684T:p.S228S	exonic	ENSG00000158481	NA	synonymous SNV	ENSG00000158481:ENST00000368170:exon4:c.C684T:p.S228S	NA	NA	1q23.1	NA	NA	NA	NA	rs3138103	0.0014	0.0014	0.003	0.000998403	0.004	NA	0.0014	NA	NA	0.0026	NA	0.0028	NA	0.0028	0.0042	.	.	.	.	.	.	.	.	1.000	N	.	.	.	.	-0.977	T	0.019	T	.	0.398	6.164	-1.61	-0.310	-2.389	2.974	0.398461	NA	NA	0.004186	0.001362	NA	NA	NA	7.6556806
886	2	96993884	96993884	A	G	exonic	ITPRIPL1	NA	synonymous SNV	ITPRIPL1:NM_178495:exon1:c.A1539G:p.P513P,ITPRIPL1:NM_001163523:exon2:c.A1491G:p.P497P,ITPRIPL1:NM_001163524:exon2:c.A1491G:p.P497P,ITPRIPL1:NM_001008949:exon3:c.A1515G:p.P505P	exonic	ENSG00000198885	NA	synonymous SNV	ENSG00000198885:ENST00000361124:exon1:c.A1539G:p.P513P,ENSG00000198885:ENST00000536814:exon2:c.A1491G:p.P497P,ENSG00000198885:ENST00000542887:exon2:c.A1491G:p.P497P,ENSG00000198885:ENST00000439118:exon3:c.A1515G:p.P505P	NA	NA	2q11.2	NA	NA	NA	NA	rs1048675	0.29	0.29	0.293	0.379992	0.3191	0.2778	0.317	0.2784	0.7301	0.32	0.26	0.31	0.26	0.357	0.34	.	.	.	.	.	.	.	.	0.333	P	.	.	.	.	-1.075	T	0.000	T	.	-0.025	3.885	-11.3	-2.991	-1.787	7.727	-0.025099	NA	NA	0.335465	0.282569	ID=COSM148904;OCCURENCE=1(stomach)	0.232	NA	7.6551016
887	19	21991663	21991663	A	G	exonic	ZNF43	NA	synonymous SNV	ZNF43:NM_001256651:exon3:c.T981C:p.H327H,ZNF43:NM_001256654:exon3:c.T981C:p.H327H,ZNF43:NM_001256653:exon4:c.T1203C:p.H401H,ZNF43:NM_003423:exon4:c.T1176C:p.H392H,ZNF43:NM_001256650:exon6:c.T1158C:p.H386H,ZNF43:NM_001256648:exon7:c.T1158C:p.H386H,ZNF43:NM_001256649:exon7:c.T1158C:p.H386H	exonic	ENSG00000198521	NA	synonymous SNV	ENSG00000198521:ENST00000354959:exon4:c.T1176C:p.H392H,ENSG00000198521:ENST00000598381:exon6:c.T1158C:p.H386H,ENSG00000198521:ENST00000594012:exon7:c.T1158C:p.H386H,ENSG00000198521:ENST00000595461:exon7:c.T1158C:p.H386H	Score=376;Name=lod=45	NA	19p12	NA	Name=SETDB1,ZNF274	NA	NA	rs61733114	0.03	0.03	0.032	0.0389377	NA	NA	0.0159	0.1392	NA	0.0026	NA	0.02	0.12	0.0116	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.223753	NA	NA	0.00093	0.106446	NA	0.051	NA	7.6541366
887	1	89426956	89426956	C	T	exonic	CCBL2	NA	synonymous SNV	CCBL2:NM_001008662:exon7:c.G579A:p.E193E,CCBL2:NM_001008661:exon8:c.G681A:p.E227E	exonic	ENSG00000137944	NA	synonymous SNV	ENSG00000137944:ENST00000370491:exon7:c.G579A:p.E193E,ENSG00000137944:ENST00000260508:exon8:c.G681A:p.E227E,ENSG00000137944:ENST00000370486:exon9:c.G681A:p.E227E	Score=554;Name=lod=238	NA	1p22.2	NA	Name=MafK_(ab50322)	NA	NA	rs12063768	0.03	0.03	0.024	0.0383387	0.002	NA	0.0159	0.1354	NA	0.0026	NA	0.02	0.1	0.0107	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.211059	NA	NA	0.000581	0.099183	NA	0.029	NA	7.6533856
887	19	13010520	13010520	A	G	exonic	GCDH	NA	nonsynonymous SNV	GCDH:NM_013976:exon12:c.A1250G:p.Q417R	exonic	ENSG00000105607	NA	nonsynonymous SNV	ENSG00000105607:ENST00000457854:exon12:c.A1250G:p.Q417R	NA	NA	19p13.2	NA	NA	NA	NA	rs8012	0.69	0.69	0.726	0.720447	0.5219	0.7768	0.6988	0.8563	0.6984	0.5	0.81	0.67	0.85	0.613	0.85	0.03	D	0.0	B	0.0	B	.	.	1.000	P	.	.	-4.39	D	-0.943	T	0.000	T	0.015	-0.861	0.525	-1.41	-0.796	0.326	6.972	-0.860606	NA	1	0.545422	0.824381	NA	0.652	NA	7.6530114
887	16	16208714	16208714	G	A	exonic	ABCC1	NA	synonymous SNV	ABCC1:NM_004996:exon23:c.G3171A:p.L1057L	exonic	ENSG00000103222	NA	synonymous SNV	ENSG00000103222:ENST00000349029:exon21:c.G2826A:p.L942L,ENSG00000103222:ENST00000346370:exon22:c.G3003A:p.L1001L,ENSG00000103222:ENST00000351154:exon22:c.G2994A:p.L998L,ENSG00000103222:ENST00000345148:exon23:c.G3171A:p.L1057L,ENSG00000103222:ENST00000399410:exon23:c.G3171A:p.L1057L,ENSG00000103222:ENST00000399408:exon24:c.G3201A:p.L1067L	Score=412;Name=lod=63	NA	16p13.11	Score=760;Name=V$PAX6_01	NA	NA	NA	rs191017838	0.0005	0.0005	NA	0.000798722	0.003	NA	0.0014	NA	NA	0.0013	NA	NA	NA	0.0034	0.0077	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.003538	NA	NA	0.007705	0.001157	NA	NA	NA	7.6525616
887	3	13612936	13612936	A	G	exonic	FBLN2	NA	nonsynonymous SNV	FBLN2:NM_001004019:exon2:c.A1081G:p.S361G,FBLN2:NM_001165035:exon2:c.A1081G:p.S361G,FBLN2:NM_001998:exon2:c.A1081G:p.S361G	exonic	ENSG00000163520	NA	nonsynonymous SNV	ENSG00000163520:ENST00000295760:exon2:c.A1081G:p.S361G,ENSG00000163520:ENST00000404922:exon2:c.A1081G:p.S361G,ENSG00000163520:ENST00000492059:exon2:c.A1081G:p.S361G,ENSG00000163520:ENST00000535798:exon2:c.A1159G:p.S387G	NA	NA	3p25.1	NA	NA	Name=3	NA	rs3732666	0.42	0.42	0.391	0.467452	0.1869	0.5496	0.2824	0.7587	0.409	0.18	0.59	0.27	0.7	0.2967	0.7	0.43	T	0.0	B	0.0	B	0.002	N	1.000	P	0	N	-1.19	T	-0.942	T	0.000	T	0.055	0.327	5.775	1.9	-0.056	-0.151	4.897	0.327445	NA	0.39	0.197238	0.655974	NA	0.522	NA	7.6524954
887	8	26220321	26220321	A	G	exonic	PPP2R2A	NA	synonymous SNV	PPP2R2A:NM_001177591:exon7:c.A789G:p.L263L,PPP2R2A:NM_002717:exon7:c.A759G:p.L253L	exonic	ENSG00000221914	NA	synonymous SNV	ENSG00000221914:ENST00000524169:exon3:c.A96G:p.L32L,ENSG00000221914:ENST00000315985:exon7:c.A789G:p.L263L,ENSG00000221914:ENST00000380737:exon7:c.A759G:p.L253L	Score=641;Name=lod=536	NA	8p21.2	Score=830;Name=V$E4BP4_01	NA	NA	NA	rs142156798	0.0032	0.0032	NA	0.00279553	0.008	NA	0.0086	NA	NA	0.01	NA	0.01	NA	0.004	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.114223	NA	NA	0.002442	0.000681	NA	NA	NA	7.6522246
887	19	41354553	41354553	C	T	exonic	CYP2A6	NA	synonymous SNV	CYP2A6:NM_000762:exon3:c.G459A:p.A153A	exonic	ENSG00000255974	NA	synonymous SNV	ENSG00000255974:ENST00000301141:exon3:c.G459A:p.A153A	NA	NA	19q13.2	NA	Name=CTCF_(SC-5916),CTCF,Rad21	Name=24	NA	rs28399441	0.04	0.04	0.031	0.0463259	NA	NA	0.013	0.1687	NA	0.0013	NA	0.02	0.14	0.0139	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.520837	NA	NA	0.000582	0.139809	NA	0.051	NA	7.6521846
887	3	52558008	52558008	T	C	exonic	STAB1	NA	nonsynonymous SNV	STAB1:NM_015136:exon67:c.T7517C:p.M2506T	exonic	ENSG00000010327	NA	nonsynonymous SNV	ENSG00000010327:ENST00000321725:exon67:c.T7517C:p.M2506T	NA	NA	3p21.1	NA	NA	NA	NA	rs13303	0.6	0.6	0.593	0.548522	0.5656	0.4524	0.6513	0.7141	0.3333	0.57	0.51	0.66	0.69	0.5453	0.69	0.76	T	0.0	B	0.0	B	0.698	N	1.000	P	-1.39	N	-1.77	D	-0.945	T	0.000	T	0.411	-1.585	0.014	3.6	0.819	-0.595	6.319	-1.58471	NA	0.82	0.570414	0.651295	NA	0.543	NA	7.6520194
887	10	71176012	71176012	A	G	exonic	TACR2	NA	nonsynonymous SNV	TACR2:NM_001057:exon1:c.T68C:p.I23T	exonic	ENSG00000075073	NA	nonsynonymous SNV	ENSG00000075073:ENST00000373306:exon1:c.T68C:p.I23T	NA	NA	10q22.1	NA	NA	NA	NA	rs5030920	0.22	0.22	0.222	0.24361	0.2356	0.0546	0.1758	0.4002	0.2832	0.24	0.05	0.19	0.4	0.2223	0.4	0.49	T	0.0	B	0.0	B	0.291	N	1.000	P	0.805	L	1.23	T	-0.914	T	0.000	T	0.05	-0.587	1.368	2.83	0.431	0.208	7.330	-0.586835	NA	0.44	0.224419	0.374262	ID=COSM1348802;OCCURENCE=1(large_intestine)	0.312	NA	7.6510144
887	2	1842968	1842968	T	C	exonic	MYT1L	NA	synonymous SNV	MYT1L:NM_015025:exon21:c.A3027G:p.G1009G	exonic	ENSG00000186487	NA	synonymous SNV	ENSG00000186487:ENST00000399157:exon2:c.A195G:p.G65G,ENSG00000186487:ENST00000407844:exon3:c.A21G:p.G7G,ENSG00000186487:ENST00000399161:exon21:c.A3033G:p.G1011G,ENSG00000186487:ENST00000428368:exon21:c.A3027G:p.G1009G	NA	NA	2p25.3	Score=693;Name=V$BRACH_01	Name=CTCF	Name=4	NA	rs6728368	0.49	0.49	0.467	0.456669	0.3121	0.6558	0.3141	0.5575	0.365	0.32	0.63	0.33	0.69	0.367	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.22874	NA	NA	0.337151	0.624268	NA	0.435	NA	7.6504156
887	6	31084787	31084787	A	G	exonic	CDSN	NA	nonsynonymous SNV	CDSN:NM_001264:exon2:c.T605C:p.F202S	exonic	ENSG00000204539	NA	nonsynonymous SNV	ENSG00000204539:ENST00000376288:exon2:c.T605C:p.F202S	NA	NA	6p21.33	NA	NA	NA	NA	rs707913	0.3	0.3	0.265	0.28095	0.2336	0.3403	0.3314	0.4009	0.0706	0.22	0.31	0.34	0.37	0.2313	0.37	0.45	T	.	.	.	.	0.353	N	1.000	P	.	.	3.82	T	-0.913	T	0.003	T	0.041	-1.273	0.044	1.41	0.413	2.133	6.085	-1.27271	NA	0.92	0.21814	0.358148	NA	0.239	NA	7.6502934
887	16	88744949	88744949	G	T	exonic	SNAI3	NA	synonymous SNV	SNAI3:NM_178310:exon3:c.C786A:p.A262A	exonic	ENSG00000185669	NA	synonymous SNV	ENSG00000185669:ENST00000332281:exon3:c.C786A:p.A262A	Score=439;Name=lod=81	NA	16q24.3	Score=812;Name=V$CDPCR3_01	NA	NA	NA	rs139375690	0.0023	0.0023	0.002	0.00419329	0.0089	NA	0.0029	NA	0.0102	0.004	NA	0.01	NA	0.0046	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.317645	NA	NA	0.00407	0.000227	NA	NA	NA	7.6490966
887	21	44299573	44299573	C	T	exonic	WDR4	NA	synonymous SNV	WDR4:NM_001260474:exon1:c.G33A:p.G11G,WDR4:NM_018669:exon1:c.G33A:p.G11G,WDR4:NM_033661:exon1:c.G33A:p.G11G	exonic	ENSG00000160193	NA	synonymous SNV	ENSG00000160193:ENST00000330317:exon1:c.G33A:p.G11G,ENSG00000160193:ENST00000398208:exon1:c.G33A:p.G11G	NA	NA	21q22.3	Score=793;Name=V$CMYB_01	Name=CEBPB,Max,ELF1_(SC-631),NRSF,Pol2,Pol2(phosphoS2),YY1_(C-20),BRCA1_(C-1863),E2F6,eGFP-JunD,USF1_(SC-8983),ETS1,TAF1,E2F4,GABP,USF-1,THAP1_(SC-98174),c-Myc,HEY1,NFKB,SRF,GRp20,YY1,c-Jun,HA-E2F1,Sin3Ak-20,Pol2-4H8,HDAC2_(SC-6296),ZNF263	NA	NA	rs138295040	0.0023	0.0023	NA	0.00299521	0.008	0.001	0.0029	NA	0.0041	0.01	0.0017	NA	NA	0.0045	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.017281	2.017281	NA	0.005815	0.000454	NA	NA	NA	7.6483516
887	6	39041502	39041502	A	C	exonic	GLP1R	NA	nonsynonymous SNV	GLP1R:NM_002062:exon7:c.A780C:p.L260F	exonic	ENSG00000112164	NA	nonsynonymous SNV	ENSG00000112164:ENST00000373256:exon7:c.A780C:p.L260F	Score=391;Name=lod=52	NA	6p21.2	NA	NA	NA	NA	rs1042044	0.57	0.57	0.539	0.578474	0.5626	0.5506	0.5937	0.5885	0.5992	0.55	0.52	0.6	0.63	0.5638	0.69	1	T	0.0	B	0.006	B	0.000	N	1.000	P	-1.655	N	1.0	T	-0.946	T	0.007	T	0.086	-0.945	0.35	3.88	0.766	0.906	6.368	-0.945358	NA	1	0.558837	0.580345	NA	0.696	NA	7.6480964
887	19	56487603	56487603	A	G	exonic	NLRP8	NA	nonsynonymous SNV	NLRP8:NM_176811:exon8:c.A2810G:p.K937R	exonic	ENSG00000179709	NA	nonsynonymous SNV	ENSG00000179709:ENST00000291971:exon8:c.A2810G:p.K937R,ENSG00000179709:ENST00000590542:exon8:c.A2753G:p.K918R	NA	NA	19q13.43	NA	NA	NA	NA	rs306481	0.55	0.55	0.515	0.563099	0.5537	0.6657	0.6037	0.4024	0.6554	0.56	0.65	0.6	0.41	0.5763	0.65	0.72	T	0.018	B	0.03	B	.	.	1.000	P	0.205	N	-0.02	T	-0.952	T	0.000	T	0.016	-1.47	0.018	-5.02	-1.533	-0.429	2.550	-1.47015	NA	0.55	0.555581	0.408761	NA	0.399	NA	7.6477524
887	14	60938319	60938319	T	C	exonic	C14orf39	NA	synonymous SNV	C14orf39:NM_174978:exon6:c.A462G:p.A154A	exonic	ENSG00000179008	NA	synonymous SNV	ENSG00000179008:ENST00000321731:exon6:c.A462G:p.A154A	Score=517;Name=lod=168	NA	14q23.1	Score=895;Name=V$MSX1_01	NA	NA	NA	rs35543839	0.0032	0.0032	0.001	0.00319489	0.006	0.001	0.0014	0.0008	0.0072	0.01	0.0017	0.0028	0.002	0.0055	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.217291	NA	NA	0.007454	0.001817	NA	0.051	NA	7.6477126
887	3	48694471	48694471	C	T	exonic	CELSR3	NA	synonymous SNV	CELSR3:NM_001407:exon2:c.G4059A:p.Q1353Q	exonic	ENSG00000008300	NA	synonymous SNV	ENSG00000008300:ENST00000164024:exon2:c.G4059A:p.Q1353Q,ENSG00000008300:ENST00000544264:exon2:c.G4059A:p.Q1353Q	Score=560;Name=lod=251	NA	3p21.31	NA	NA	Name=7	NA	rs145229058	0.0027	0.0027	0.003	0.00159744	0.005	NA	0.0043	NA	NA	0.01	NA	0.01	NA	0.006	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.199285	NA	NA	0.008843	0.001136	ID=COSM166490;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	NA	NA	7.6468236
887	4	24838984	24838984	G	A	exonic	CCDC149	NA	synonymous SNV	CCDC149:NM_001130726:exon6:c.C528T:p.D176D,CCDC149:NM_173463:exon7:c.C528T:p.D176D	exonic	ENSG00000181982	NA	synonymous SNV	ENSG00000181982:ENST00000504487:exon6:c.C528T:p.D176D,ENSG00000181982:ENST00000389609:exon7:c.C528T:p.D176D	Score=425;Name=lod=71	NA	4p15.2	Score=763;Name=V$PAX6_01	NA	NA	NA	rs58692972	0.01	0.01	0.006	0.0107827	0.007	0.001	0.0216	0.0204	0.0041	0.0026	NA	0.02	0.02	0.0076	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.522665	NA	NA	0.00593	0.02542	NA	0.022	NA	7.6461366
887	6	117622184	117622184	G	C	exonic	ROS1	NA	nonsynonymous SNV	ROS1:NM_002944:exon42:c.C6686G:p.S2229C	exonic	ENSG00000047936	NA	nonsynonymous SNV	ENSG00000047936:ENST00000368508:exon42:c.C6686G:p.S2229C,ENSG00000047936:ENST00000368507:exon43:c.C6668G:p.S2223C	NA	NA	6q22.1	NA	NA	NA	NA	rs619203	0.16	0.16	0.145	0.139377	0.2197	0.1587	0.1657	0.0386	0.1544	0.23	0.15	0.17	0.04	0.208	0.26	0.25	T	0.0	B	0.0	B	0.302	N	1.000	P	-0.805	N	-0.58	T	-1.075	T	0.038	T	0.055	-0.574	1.417	2.24	0.089	-0.046	2.093	-0.57399	NA	0.31	0.259767	0.074217	ID=COSM150168;OCCURENCE=1(stomach)	0.087	NA	7.6458664
887	16	67220479	67220479	G	A	exonic	EXOC3L1	NA	synonymous SNV	EXOC3L1:NM_178516:exon8:c.C1366T:p.L456L	exonic	ENSG00000179044	NA	synonymous SNV	ENSG00000179044:ENST00000545725:exon7:c.C1057T:p.L353L,ENSG00000179044:ENST00000563889:exon7:c.C1072T:p.L358L,ENSG00000179044:ENST00000314586:exon8:c.C1366T:p.L456L	Score=412;Name=lod=63	NA	16q22.1	NA	NA	Name=42	NA	rs75613564	0.0032	0.0032	0.003	0.00199681	0.008	NA	0.0014	0.0008	NA	0.01	NA	0.0028	NA	0.0051	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.896996	NA	NA	0.008023	0.00182	NA	NA	NA	7.6455436
887	10	48388783	48388783	A	G	exonic	RBP3	NA	synonymous SNV	RBP3:NM_002900:exon1:c.T2095C:p.L699L	exonic	ENSG00000107618	NA	synonymous SNV	ENSG00000107618:ENST00000224600:exon1:c.T2095C:p.L699L	Score=527;Name=lod=184	NA	10q11.22	Score=786;Name=V$COMP1_01	NA	NA	NA	rs17095789	0.05	0.05	0.052	0.0640974	0.002	NA	0.0187	0.2315	NA	0.0013	NA	0.02	0.22	0.018	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.312748	NA	NA	0.001631	0.179464	NA	0.065	NA	7.6450356
888	9	116811184	116811184	G	A	exonic	ZNF618	NA	synonymous SNV	ZNF618:NM_133374:exon14:c.G1323A:p.K441K	exonic	ENSG00000157657	NA	synonymous SNV	ENSG00000157657:ENST00000288466:exon14:c.G1323A:p.K441K,ENSG00000157657:ENST00000374126:exon15:c.G1602A:p.K534K	Score=641;Name=lod=535	NA	9q32	Score=814;Name=V$ER_Q6	NA	NA	NA	rs7852282	0.07	0.07	0.07	0.067492	NA	NA	0.0303	0.2375	0.0031	NA	NA	0.04	0.27	0.02	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.152126	NA	NA	0.002108	0.183664	NA	0.043	NA	7.6445586
888	15	68583172	68583172	C	G	exonic	FEM1B	NA	synonymous SNV	FEM1B:NM_015322:exon2:c.C1476G:p.V492V	exonic	ENSG00000169018	NA	synonymous SNV	ENSG00000169018:ENST00000306917:exon2:c.C1476G:p.V492V	Score=428;Name=lod=73	NA	15q23	Score=707;Name=V$BRACH_01	NA	NA	NA	rs143637660	0.0032	0.0032	0.002	0.00219649	0.0099	NA	NA	NA	0.001	0.01	NA	NA	NA	0.0059	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.375857	NA	NA	0.006515	0.000909	NA	NA	NA	7.6443516
888	6	44272382	44272382	C	T	exonic	AARS2	NA	synonymous SNV	AARS2:NM_020745:exon12:c.G1752A:p.E584E	exonic	ENSG00000124608	NA	synonymous SNV	ENSG00000124608:ENST00000244571:exon12:c.G1752A:p.E584E	Score=439;Name=lod=81	NA	6p21.1	Score=904;Name=V$AREB6_02	NA	NA	NA	rs78525157	0.01	0.01	0.005	0.0133786	0.0089	0.002	0.013	0.0053	0.0409	0.01	0.0017	0.01	0.0041	0.0088	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.133188	NA	NA	0.005465	0.004312	NA	0.014	NA	7.6435016
888	1	1686040	1686040	G	T	exonic	NADK	NA	nonsynonymous SNV	NADK:NM_001198995:exon6:c.C690A:p.N230K,NADK:NM_001198993:exon8:c.C786A:p.N262K,NADK:NM_023018:exon8:c.C786A:p.N262K,NADK:NM_001198994:exon10:c.C1221A:p.N407K	exonic	ENSG00000008130	NA	nonsynonymous SNV	ENSG00000008130:ENST00000342348:exon6:c.C690A:p.N230K,ENSG00000008130:ENST00000341426:exon8:c.C786A:p.N262K,ENSG00000008130:ENST00000341991:exon8:c.C786A:p.N262K,ENSG00000008130:ENST00000344463:exon10:c.C1221A:p.N407K,ENSG00000008130:ENST00000378625:exon10:c.C1221A:p.N407K	NA	NA	1p36.33	NA	NA	NA	NA	rs4751	0.28	0.28	0.264	0.249401	0.4115	0.2837	0.2651	0.0499	0.3057	0.41	0.3	0.29	0.05	0.3564	0.42	0.45	T	0.562	P	0.229	B	0.000	D	0.867	P	1.59	L	0.94	T	-0.956	T	0.000	T	0.099	0.426	6.316	-1.93	-0.622	-0.842	13.146	0.426413	NA	0.14	0.422558	0.112574	ID=COSM1472949,COSM424509;OCCURENCE=1(breast)	0.319	NA	7.6428754
888	3	8579093	8579093	C	T	exonic	LMCD1	NA	synonymous SNV	LMCD1:NM_014583:exon3:c.C354T:p.Y118Y	exonic	ENSG00000071282	NA	synonymous SNV	ENSG00000071282:ENST00000426878:exon1:c.C225T:p.Y75Y,ENSG00000071282:ENST00000454244:exon2:c.C135T:p.Y45Y,ENSG00000071282:ENST00000157600:exon3:c.C354T:p.Y118Y,ENSG00000071282:ENST00000535732:exon3:c.C354T:p.Y118Y,ENSG00000071282:ENST00000415597:exon4:c.C372T:p.Y124Y	Score=561;Name=lod=253	NA	3p26.1	Score=708;Name=V$HOX13_01	NA	NA	NA	rs139605755	0.0046	0.0046	0.003	0.00279553	0.006	NA	0.0086	NA	0.002	0.01	NA	0.01	NA	0.0073	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.065876	NA	NA	0.01093	0.002724	NA	NA	NA	7.6424366
888	1	155880573	155880573	C	G	exonic	RIT1	NA	nonsynonymous SNV	RIT1:NM_001256821:exon2:c.G31C:p.E11Q	exonic	ENSG00000143622	NA	nonsynonymous SNV	ENSG00000143622:ENST00000368322:exon2:c.G31C:p.E11Q	NA	NA	1q22	NA	Name=CTCF,Pol2	Name=85	NA	rs493446	0.81	0.81	0.787	0.779952	0.8926	0.9405	0.9078	0.4334	0.8763	0.9	0.93	0.91	0.45	0.8775	0.93	0.49	T	.	.	.	.	.	.	0.997	P	.	.	-0.21	T	-1.065	T	0.078	T	0.022	-1.365	0.027	-0.379	-0.357	1.320	7.464	-1.365295	NA	0.51	0.921628	0.54857	NA	0.681	NA	7.6416054
888	3	145913061	145913061	G	T	exonic	PLSCR4	NA	synonymous SNV	PLSCR4:NM_001177304:exon5:c.C480A:p.S160S,PLSCR4:NM_001128306:exon6:c.C525A:p.S175S,PLSCR4:NM_001128305:exon8:c.C795A:p.S265S,PLSCR4:NM_020353:exon8:c.C795A:p.S265S,PLSCR4:NM_001128304:exon10:c.C795A:p.S265S	exonic	ENSG00000114698	NA	synonymous SNV	ENSG00000114698:ENST00000433593:exon5:c.C480A:p.S160S,ENSG00000114698:ENST00000383083:exon6:c.C525A:p.S175S,ENSG00000114698:ENST00000354952:exon8:c.C795A:p.S265S,ENSG00000114698:ENST00000446574:exon8:c.C795A:p.S265S,ENSG00000114698:ENST00000493382:exon10:c.C795A:p.S265S	NA	NA	3q24	NA	Name=Pol2(b),c-Fos,GATA-2,c-Jun	Name=22	NA	rs34467190	0.0037	0.0037	0.003	0.00379393	0.0129	NA	0.0014	0.0008	0.0041	0.01	NA	NA	NA	0.0057	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.183986	NA	NA	0.007093	0.001362	NA	0.007	NA	7.6409736
888	7	129855837	129855837	C	T	exonic	SSMEM1	NA	nonsynonymous SNV	SSMEM1:NM_145268:exon3:c.C262T:p.R88W	exonic	ENSG00000165120	NA	nonsynonymous SNV	ENSG00000165120:ENST00000297819:exon3:c.C262T:p.R88W	NA	NA	7q32.2	NA	NA	NA	NA	rs4728190	0.19	0.19	0.209	0.186901	0.2366	0.0069	0.1499	0.357	0.1176	0.24	0.0017	0.17	0.36	0.2175	0.36	0.14	T	0.002	B	0.0	B	0.396	N	1.000	P	0.83	L	0.77	T	-0.964	T	0.000	T	0.104	0.027	4.155	-2.95	-0.684	-0.011	2.006	0.027164	NA	0.13	0.239186	0.344076	NA	0.246	NA	7.6400474
888	19	1256998	1256998	C	T	exonic	MIDN	NA	synonymous SNV	MIDN:NM_177401:exon8:c.C1134T:p.D378D	exonic	ENSG00000167470	NA	synonymous SNV	ENSG00000167470:ENST00000591446:exon7:c.C1134T:p.D378D,ENSG00000167470:ENST00000300952:exon8:c.C1134T:p.D378D	Score=483;Name=lod=123	NA	19p13.3	NA	Name=Pol2	Name=7	NA	rs9823	0.33	0.33	0.283	0.301917	0.3479	0.4901	0.3444	0.0825	0.3272	0.34	0.52	0.34	0.1	0.3374	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.082531	NA	NA	0.341566	0.124035	ID=COSM438607;OCCURENCE=2(breast)	0.239	NA	7.6398006
888	1	173516871	173516871	G	C	exonic	SLC9C2	NA	nonsynonymous SNV	SLC9C2:NM_178527:exon13:c.C1514G:p.A505G	exonic	ENSG00000162753	NA	nonsynonymous SNV	ENSG00000162753:ENST00000536496:exon12:c.C1208G:p.A403G,ENSG00000162753:ENST00000367714:exon13:c.C1514G:p.A505G	Score=486;Name=lod=126	NA	1q25.1	NA	NA	NA	NA	rs16846206	0.32	0.32	0.284	0.334665	0.2107	0.6448	0.3256	0.1293	0.4264	0.22	0.62	0.31	0.14	0.2771	0.62	0.27	T	0.167	B	0.034	B	0.422	N	0.999	P	0	N	1.8	T	-0.947	T	0.009	T	0.016	1.259	10.1	-0.206	0.035	0.324	4.598	1.258637	1.258637	0.06	0.20593	0.132547	NA	0.268	NA	7.6396034
888	3	49688155	49688155	C	T	exonic	BSN	NA	synonymous SNV	BSN:NM_003458:exon4:c.C1629T:p.A543A	exonic	ENSG00000164061	NA	synonymous SNV	ENSG00000164061:ENST00000296452:exon4:c.C1629T:p.A543A	Score=361;Name=lod=39	NA	3p21.31	Score=710;Name=V$NRSF_01	NA	NA	NA	rs139787101	0.01	0.01	0.004	0.00219649	0.0089	NA	0.0014	0.0008	NA	0.01	NA	0.01	NA	0.0091	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.50166	NA	NA	0.009537	0.001817	NA	NA	NA	7.6391296
888	21	42817930	42817930	G	A	exonic	MX1	NA	nonsynonymous SNV	MX1:NM_001178046:exon11:c.G1135A:p.V379I,MX1:NM_002462:exon13:c.G1135A:p.V379I,MX1:NM_001144925:exon15:c.G1135A:p.V379I	exonic	ENSG00000157601	NA	nonsynonymous SNV	ENSG00000157601:ENST00000288383:exon9:c.G1066A:p.V356I,ENSG00000157601:ENST00000455164:exon11:c.G1135A:p.V379I,ENSG00000157601:ENST00000398598:exon13:c.G1135A:p.V379I,ENSG00000157601:ENST00000398600:exon15:c.G1135A:p.V379I	Score=401;Name=lod=57	NA	21q22.3	NA	NA	NA	NA	rs469390	0.43	0.43	0.42	0.461861	0.5885	0.2857	0.4496	0.444	0.546	0.56	0.23	0.46	0.44	0.5171	0.59	1	T	0.0	B	0.0	B	0.001	N	0.632	P	-1.555	N	-0.39	T	-0.922	T	0.000	T	0.064	-1.129	0.119	2.29	0.350	0.915	6.626	-1.128583	NA	1	0.588953	0.448479	NA	0.493	NA	7.6387804
888	5	95757592	95757592	G	A	exonic	PCSK1	NA	synonymous SNV	PCSK1:NM_000439:exon5:c.C612T:p.N204N,PCSK1:NM_001177875:exon5:c.C471T:p.N157N	exonic	ENSG00000175426	NA	synonymous SNV	ENSG00000175426:ENST00000311106:exon5:c.C612T:p.N204N,ENSG00000175426:ENST00000508626:exon5:c.C471T:p.N157N	Score=655;Name=lod=612	NA	5q15	Score=870;Name=V$FOXO3_01	NA	NA	NA	rs6231	0.06	0.06	0.072	0.0535144	0.006	0.0139	0.0173	0.1747	0.0051	0.01	0.01	0.02	0.23	0.0175	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.870215	NA	NA	0.004651	0.126872	NA	0.072	NA	7.6385156
888	17	76045806	76045806	C	T	exonic	TNRC6C	NA	synonymous SNV	TNRC6C:NM_001142640:exon4:c.C663T:p.H221H,TNRC6C:NM_018996:exon4:c.C663T:p.H221H	exonic	ENSG00000078687	NA	synonymous SNV	ENSG00000078687:ENST00000541771:exon1:c.C663T:p.H221H,ENSG00000078687:ENST00000544502:exon1:c.C663T:p.H221H,ENSG00000078687:ENST00000301624:exon3:c.C663T:p.H221H,ENSG00000078687:ENST00000335749:exon3:c.C663T:p.H221H,ENSG00000078687:ENST00000588061:exon5:c.C663T:p.H221H,ENSG00000078687:ENST00000588847:exon5:c.C663T:p.H221H	Score=566;Name=lod=267	NA	17q25.3	Score=802;Name=V$PAX5_02	NA	NA	NA	rs141190761	0.0041	0.0041	0.002	0.0109824	0.004	0.0069	0.0144	0.0015	0.0327	0.004	0.0035	0.01	NA	0.0141	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.009761	NA	NA	0.011421	0.003032	NA	0.007	NA	7.6371456
888	2	40342600	40342600	G	T	exonic	SLC8A1	NA	synonymous SNV	SLC8A1:NM_001112801:exon8:c.C2676A:p.G892G,SLC8A1:NM_001112802:exon8:c.C2607A:p.G869G,SLC8A1:NM_001112800:exon9:c.C2700A:p.G900G,SLC8A1:NM_001252624:exon9:c.C2691A:p.G897G,SLC8A1:NM_021097:exon10:c.C2715A:p.G905G	exonic	ENSG00000183023	NA	synonymous SNV	ENSG00000183023:ENST00000406391:exon7:c.C2607A:p.G869G,ENSG00000183023:ENST00000542024:exon7:c.C2607A:p.G869G,ENSG00000183023:ENST00000402441:exon8:c.C2607A:p.G869G,ENSG00000183023:ENST00000405269:exon8:c.C2607A:p.G869G,ENSG00000183023:ENST00000406785:exon8:c.C2607A:p.G869G,ENSG00000183023:ENST00000405901:exon9:c.C2700A:p.G900G,ENSG00000183023:ENST00000408028:exon9:c.C2691A:p.G897G,ENSG00000183023:ENST00000332839:exon10:c.C2715A:p.G905G,ENSG00000183023:ENST00000542756:exon10:c.C2700A:p.G900G,ENSG00000183023:ENST00000403092:exon11:c.C2715A:p.G905G	Score=507;Name=lod=154	NA	2p22.1	Score=865;Name=V$AHRARNT_01	NA	NA	NA	rs148215685	0.01	0.01	0.003	0.00459265	0.0119	NA	0.0072	0.0008	0.0051	0.01	NA	0.01	0.002	0.0074	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.428484	NA	NA	0.010349	0.002043	NA	0.014	NA	7.6370176
888	7	889169	889169	A	G	intronic	SUN1	NA	NA	NA	exonic	ENSG00000164828	NA	nonsynonymous SNV	ENSG00000164828:ENST00000413514:exon2:c.A113G:p.Y38C,ENSG00000164828:ENST00000429178:exon3:c.A362G:p.Y121C,ENSG00000164828:ENST00000456758:exon10:c.A1043G:p.Y348C	NA	NA	7p22.3	Score=768;Name=V$LUN1_01	NA	NA	NA	rs74742245	0.16	0.16	0.143	0.172125	0.1849	0.1369	0.2378	0.0915	0.2577	0.18	0.16	0.24	0.09	0.1848	0.24	0.13	T	0.01	B	0.01	B	.	.	0.996	P	.	.	1.98	T	-0.971	T	0.000	T	0.16	2.02	12.71	-2.89	-0.778	0.794	1.561	2.019643	2.019643	0	0.161477	0.101598	NA	0.13	NA	7.6354897
888	11	117097931	117097931	C	T	exonic	PCSK7	NA	synonymous SNV	PCSK7:NM_004716:exon5:c.G711A:p.A237A	exonic	ENSG00000160613	NA	synonymous SNV	ENSG00000160613:ENST00000525027:exon3:c.G711A:p.A237A,ENSG00000160613:ENST00000320934:exon5:c.G711A:p.A237A	NA	NA	11q23.3	Score=773;Name=V$HEN1_02	NA	NA	Score=80;Name=466019_0_+_80	rs45528535	0.05	0.05	0.046	0.0453275	0.0119	NA	0.0375	0.1415	0.002	0.01	NA	0.04	0.17	0.0157	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.575707	NA	NA	0.003608	0.121536	NA	0.058	NA	7.6354586
888	10	135012162	135012162	T	C	exonic	KNDC1	NA	nonsynonymous SNV	KNDC1:NM_152643:exon14:c.T2150C:p.L717P	exonic	ENSG00000171798	NA	nonsynonymous SNV	ENSG00000171798:ENST00000368571:exon13:c.T1955C:p.L652P,ENSG00000171798:ENST00000304613:exon14:c.T2150C:p.L717P,ENSG00000171798:ENST00000368572:exon14:c.T2150C:p.L717P	NA	NA	10q26.3	NA	NA	NA	NA	rs2998139	0.55	0.55	0.537	0.557907	0.5308	0.6121	0.4914	0.5182	0.6309	0.55	0.64	0.51	0.47	0.6023	0.64	0.27	T	0.0	B	0.0	B	0.686	N	1.000	P	-1.24	N	2.83	T	-0.964	T	0.000	T	0.016	0.652	7.498	2.82	0.768	1.349	6.014	0.652101	NA	0.13	0.564992	0.549234	ID=COSM427278;OCCURENCE=1(breast)	0.536	NA	7.6352414
889	5	151772028	151772028	G	T	exonic	NMUR2	NA	synonymous SNV	NMUR2:NM_020167:exon4:c.C972A:p.P324P	exonic	ENSG00000132911	NA	synonymous SNV	ENSG00000132911:ENST00000255262:exon4:c.C972A:p.P324P	Score=540;Name=lod=209	NA	5q33.1	Score=824;Name=V$TAXCREB_01	NA	NA	NA	rs35771607	0.0032	0.0032	0.002	0.00259585	0.0109	NA	0.0029	NA	NA	0.01	NA	0.0028	NA	0.0088	0.012	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.021459	NA	NA	0.012326	0.001135	NA	NA	NA	7.6346406
889	1	232574921	232574921	T	C	exonic	SIPA1L2	NA	nonsynonymous SNV	SIPA1L2:NM_020808:exon13:c.A3964G:p.T1322A	exonic	ENSG00000116991	NA	nonsynonymous SNV	ENSG00000116991:ENST00000308942:exon7:c.A1186G:p.T396A,ENSG00000116991:ENST00000262861:exon13:c.A3964G:p.T1322A,ENSG00000116991:ENST00000366630:exon14:c.A3964G:p.T1322A	NA	NA	1q42.2	NA	NA	NA	NA	rs2275307	0.34	0.34	0.325	0.352236	0.2008	0.4643	0.3473	0.41	0.318	0.19	0.48	0.33	0.42	0.2822	0.48	1	T	0.0	B	0.0	B	0.443	N	1.000	P	-1.245	N	2.89	T	-1.038	T	0.000	T	0.025	-1.93	0.008	-1.91	-0.905	1.127	7.352	-1.930233	NA	0.88	0.215944	0.385893	NA	0.406	NA	7.6343894
889	2	179396573	179396573	T	G	exonic	TTN	NA	synonymous SNV	TTN:NM_003319:exon186:c.A77574C:p.T25858T,TTN:NM_133432:exon187:c.A77949C:p.T25983T,TTN:NM_133437:exon187:c.A78150C:p.T26050T,TTN:NM_133378:exon307:c.A97065C:p.T32355T,TTN:NM_001256850:exon308:c.A99846C:p.T33282T,TTN:NM_001267550:exon358:c.A104769C:p.T34923T	exonic	ENSG00000155657	NA	synonymous SNV	ENSG00000155657:ENST00000460472:exon186:c.A77574C:p.T25858T,ENSG00000155657:ENST00000342175:exon187:c.A78150C:p.T26050T,ENSG00000155657:ENST00000359218:exon187:c.A77949C:p.T25983T,ENSG00000155657:ENST00000342992:exon307:c.A97065C:p.T32355T,ENSG00000155657:ENST00000591111:exon308:c.A99846C:p.T33282T,ENSG00000155657:ENST00000589042:exon358:c.A104769C:p.T34923T	Score=619;Name=lod=436	NA	2q31.2	NA	NA	NA	NA	rs56375087	0.01	0.01	0.003	0.00379393	0.0159	NA	0.0043	NA	NA	0.02	NA	0.01	NA	0.01	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.469225	NA	NA	0.006771	0.000517	NA	NA	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000040946.1|RCV000125986.1;CLNDSDB=.|.;CLNDSDBID=.|.	7.6339956
889	20	62593704	62593704	G	A	exonic	ZNF512B	NA	synonymous SNV	ZNF512B:NM_020713:exon14:c.C2187T:p.L729L	exonic	ENSG00000196700	NA	synonymous SNV	ENSG00000196700:ENST00000217130:exon14:c.C2187T:p.L729L,ENSG00000196700:ENST00000369888:exon14:c.C2187T:p.L729L,ENSG00000196700:ENST00000450537:exon14:c.C2187T:p.L729L	Score=485;Name=lod=125	NA	20q13.33	Score=959;Name=V$MZF1_01	NA	NA	NA	rs817322	0.01	0.01	0.007	0.00998403	0.0129	NA	0.0058	0.0234	0.002	0.01	NA	0.0028	0.02	0.0102	0.025	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.923551	NA	NA	0.010233	0.02542	NA	0.014	NA	7.6333336
889	4	37592128	37592128	G	A	exonic	C4orf19	NA	nonsynonymous SNV	C4orf19:NM_018302:exon3:c.G451A:p.A151T,C4orf19:NM_001104629:exon4:c.G451A:p.A151T	exonic	ENSG00000154274	NA	nonsynonymous SNV	ENSG00000154274:ENST00000284437:exon3:c.G451A:p.A151T,ENSG00000154274:ENST00000381980:exon4:c.G451A:p.A151T	NA	NA	4p14	NA	NA	NA	NA	rs2973275	0.17	0.17	0.16	0.128195	0.2545	0.0784	0.1499	0.0469	0.1442	0.26	0.11	0.17	0.09	0.1983	0.26	0.87	T	0.06	B	0.082	B	0.744	N	1.000	P	0.805	L	1.35	T	-0.982	T	0.000	T	0.031	1.003	9.098	2.33	0.381	0.494	6.402	1.003456	NA	0.37	0.247209	0.087608	NA	0.181	NA	7.6333244
889	17	55191888	55191888	C	T	exonic	AKAP1	NA	synonymous SNV	AKAP1:NM_003488:exon6:c.C2172T:p.F724F,AKAP1:NM_001242902:exon7:c.C2172T:p.F724F,AKAP1:NM_001242903:exon7:c.C2172T:p.F724F	exonic	ENSG00000121057	NA	synonymous SNV	ENSG00000121057:ENST00000575032:exon1:c.C39T:p.F13F,ENSG00000121057:ENST00000573326:exon5:c.C918T:p.F306F,ENSG00000121057:ENST00000337714:exon6:c.C2172T:p.F724F,ENSG00000121057:ENST00000539273:exon6:c.C2172T:p.F724F,ENSG00000121057:ENST00000572557:exon6:c.C2172T:p.F724F,ENSG00000121057:ENST00000571629:exon7:c.C2172T:p.F724F	Score=555;Name=lod=241	NA	17q22	NA	Name=c-Myc	NA	NA	rs61751974	0.01	0.01	0.007	0.00898562	0.0169	NA	0.0072	NA	0.0235	0.02	NA	0.01	NA	0.0106	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.409762	1.409762	NA	0.007791	0.002043	NA	0.014	NA	7.6313756
889	19	12243900	12243900	A	G	exonic	ZNF20	NA	synonymous SNV	ZNF20:NM_001203250:exon4:c.T1092C:p.Y364Y,ZNF20:NM_021143:exon4:c.T1101C:p.Y367Y	exonic	ENSG00000132010	NA	synonymous SNV	ENSG00000132010:ENST00000334213:exon4:c.T1101C:p.Y367Y	Score=378;Name=lod=46	NA	19p13.2	NA	Name=SETDB1	NA	NA	rs144638502	0.01	0.01	0.005	0.00539137	0.0149	NA	0.0058	NA	0.0082	0.02	NA	0.0028	NA	0.0093	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.245253	NA	NA	0.012812	0.002963	NA	0.014	NA	7.6296546
889	19	3750615	3750615	T	C	exonic	TJP3	NA	nonsynonymous SNV	TJP3:NM_001267560:exon21:c.T2693C:p.M898T,TJP3:NM_001267561:exon21:c.T2720C:p.M907T	exonic	ENSG00000105289	NA	nonsynonymous SNV	ENSG00000105289:ENST00000262968:exon20:c.T2792C:p.M931T,ENSG00000105289:ENST00000539908:exon20:c.T2585C:p.M862T,ENSG00000105289:ENST00000587686:exon20:c.T2750C:p.M917T,ENSG00000105289:ENST00000382008:exon21:c.T2735C:p.M912T,ENSG00000105289:ENST00000541714:exon21:c.T2693C:p.M898T,ENSG00000105289:ENST00000589378:exon21:c.T2720C:p.M907T	NA	NA	19p13.3	NA	NA	NA	NA	rs1046268	0.54	0.54	0.484	0.533347	0.5636	0.6389	0.6873	0.2958	0.6053	0.54	0.68	0.67	0.28	0.5862	0.68	1	T	0.0	B	0.0	B	0.044	N	1.000	P	-2.015	N	3.57	T	-1.002	T	0.000	T	0.197	-2.887	0.001	2.44	0.153	1.347	4.909	-2.886655	NA	1	0.553979	0.354744	NA	0.572	NA	7.6295544
889	7	150773255	150773255	C	T	exonic	SLC4A2	NA	synonymous SNV	SLC4A2:NM_001199693:exon21:c.C3600T:p.T1200T,SLC4A2:NM_001199694:exon21:c.C3585T:p.T1195T,SLC4A2:NM_001199692:exon22:c.C3627T:p.T1209T,SLC4A2:NM_003040:exon22:c.C3627T:p.T1209T	exonic	ENSG00000164889	NA	synonymous SNV	ENSG00000164889:ENST00000392826:exon21:c.C3600T:p.T1200T,ENSG00000164889:ENST00000461735:exon21:c.C3585T:p.T1195T,ENSG00000164889:ENST00000310317:exon22:c.C3381T:p.T1127T,ENSG00000164889:ENST00000413384:exon22:c.C3627T:p.T1209T,ENSG00000164889:ENST00000485713:exon22:c.C3627T:p.T1209T	Score=572;Name=lod=282	NA	7q36.1	NA	Name=ZNF263,Pol2	NA	NA	rs55913625	0.01	0.01	0.003	0.00479233	0.0129	NA	0.0058	0.0008	0.0061	0.01	NA	0.01	0.002	0.0093	0.016	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.323048	2.323048	NA	0.015581	0.001816	NA	0.007	NA	7.6288856
889	5	148207633	148207633	G	A	exonic	ADRB2	NA	synonymous SNV	ADRB2:NM_000024:exon1:c.G1239A:p.L413L	exonic	ENSG00000169252	NA	synonymous SNV	ENSG00000169252:ENST00000305988:exon1:c.G1239A:p.L413L	Score=366;Name=lod=41	NA	5q32	NA	Name=c-Fos	Name=31	NA	rs1042720	0.48	0.48	0.496	0.508786	0.3131	0.6429	0.4438	0.5847	0.5153	0.32	0.65	0.39	0.59	0.3982	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.675906	NA	NA	0.32682	0.536314	NA	0.37	NA	7.6285466
889	1	1887245	1887245	G	A	exonic	KIAA1751	NA	synonymous SNV	KIAA1751:NM_001080484:exon18:c.C2061T:p.A687A	exonic	ENSG00000142609	NA	unknown	UNKNOWN	NA	NA	1p36.33	NA	Name=TCF4,FOXA1_(SC-101058)	Name=5	NA	rs28575980	0.22	0.22	0.209	0.18131	0.2316	0.2292	0.219	0.1044	0.1575	0.24	0.28	0.23	0.12	0.2267	0.28	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.978	T	0.000	T	.	-0.205	3.005	-1.58	-0.723	0.129	5.120	-0.205185	NA	NA	0.246613	0.125546	ID=COSM1626697;OCCURENCE=1(liver)	0.319	NA	7.6284203
889	8	110516653	110516653	T	C	exonic	PKHD1L1	NA	synonymous SNV	PKHD1L1:NM_177531:exon68:c.T10926C:p.H3642H	exonic	ENSG00000205038	NA	synonymous SNV	ENSG00000205038:ENST00000526472:exon14:c.T1710C:p.H570H,ENSG00000205038:ENST00000378402:exon68:c.T10926C:p.H3642H	Score=662;Name=lod=652	NA	8q23.2	Score=863;Name=V$CDPCR1_01	NA	NA	NA	rs73700608	0.05	0.05	0.049	0.048722	0.008	NA	0.0259	0.1634	0.002	0.01	NA	0.02	0.18	0.0214	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.349422	NA	NA	0.009109	0.144194	NA	0.007	NA	7.6281576
889	17	73230796	73230796	T	C	exonic	NUP85	NA	synonymous SNV	NUP85:NM_024844:exon17:c.T1680C:p.L560L	exonic	ENSG00000125450	NA	synonymous SNV	ENSG00000125450:ENST00000579900:exon2:c.T99C:p.L33L,ENSG00000125450:ENST00000540768:exon7:c.T489C:p.L163L,ENSG00000125450:ENST00000447371:exon16:c.T1176C:p.L392L,ENSG00000125450:ENST00000541827:exon16:c.T1542C:p.L514L,ENSG00000125450:ENST00000579298:exon16:c.T1545C:p.L515L,ENSG00000125450:ENST00000579324:exon16:c.T1344C:p.L448L,ENSG00000125450:ENST00000245544:exon17:c.T1680C:p.L560L	Score=361;Name=lod=39	NA	17q25.1	Score=771;Name=V$PAX2_01	NA	NA	NA	rs35857535	0.09	0.09	0.082	0.105831	0.002	0.1002	0.0692	0.2209	0.089	0.004	0.06	0.07	0.26	0.0363	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.202662	NA	NA	0.002326	0.169542	NA	0.109	NA	7.6260406
890	16	4487486	4487486	G	A	exonic	DNAJA3	NA	synonymous SNV	DNAJA3:NM_001135110:exon3:c.G429A:p.E143E,DNAJA3:NM_005147:exon3:c.G429A:p.E143E	exonic	ENSG00000103423	NA	synonymous SNV	ENSG00000103423:ENST00000262375:exon3:c.G429A:p.E143E,ENSG00000103423:ENST00000355296:exon3:c.G429A:p.E143E,ENSG00000103423:ENST00000574895:exon3:c.G429A:p.E143E	Score=601;Name=lod=371	NA	16p13.3	Score=822;Name=V$CDC5_01	NA	NA	NA	rs1062706	0.01	0.01	0.005	0.00678914	0.0139	0.003	0.0231	NA	0.001	0.01	0.0035	0.02	NA	0.0144	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.191106	2.191106	NA	0.013953	0.002731	NA	0.007	NA	7.6244136
890	20	44680424	44680424	G	T	exonic	SLC12A5	NA	synonymous SNV	SLC12A5:NM_001134771:exon18:c.G2361T:p.G787G,SLC12A5:NM_020708:exon18:c.G2292T:p.G764G	exonic	ENSG00000124140	NA	synonymous SNV	ENSG00000124140:ENST00000243964:exon18:c.G2292T:p.G764G,ENSG00000124140:ENST00000454036:exon18:c.G2361T:p.G787G	Score=657;Name=lod=622	NA	20q13.12	Score=778;Name=V$TAXCREB_02	NA	NA	NA	rs79522550	0.01	0.01	0.006	0.00479233	0.0169	NA	0.0029	NA	0.0051	0.02	NA	NA	NA	0.0115	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.132035	NA	NA	0.014419	0.002951	NA	NA	NA	7.6238476
890	17	37340336	37340336	G	A	exonic	CACNB1	NA	synonymous SNV	CACNB1:NM_000723:exon10:c.C846T:p.N282N,CACNB1:NM_199247:exon10:c.C981T:p.N327N,CACNB1:NM_199248:exon10:c.C846T:p.N282N	exonic	ENSG00000067191	NA	synonymous SNV	ENSG00000067191:ENST00000344140:exon10:c.C981T:p.N327N,ENSG00000067191:ENST00000394303:exon10:c.C846T:p.N282N,ENSG00000067191:ENST00000394310:exon10:c.C846T:p.N282N	Score=556;Name=lod=243	NA	17q12	Score=936;Name=V$FOXO4_01	NA	NA	NA	rs78894589	0.01	0.01	0.004	0.00459265	0.0139	NA	0.0101	NA	0.002	0.01	NA	0.01	NA	0.0106	0.018	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.197422	NA	NA	0.018372	0.003631	NA	NA	NA	7.6237946
890	10	38645403	38645403	T	C	ncRNA_exonic	HSD17B7P2	NA	NA	NA	ncRNA_exonic	ENSG00000099251	NA	NA	NA	Score=403;Name=lod=58	NA	10p11.1	Score=794;Name=V$COMP1_01	Name=Pol2,HEY1,ZEB1_(SC-25388),RFX5_(N-494),Sin3Ak-20,Pol2-4H8	Name=57	NA	rs2262083	0.52	0.52	0.451	0.501597	0.5159	0.5724	0.5389	0.5303	0.3487	0.51	0.55	0.53	0.49	0.5274	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.380064	NA	NA	NA	NA	NA	0.536	NA	7.6233666
890	19	44418397	44418397	G	A	exonic	ZNF45	NA	synonymous SNV	ZNF45:NM_003425:exon10:c.C1191T:p.F397F	exonic	ENSG00000124459	NA	synonymous SNV	ENSG00000124459:ENST00000589703:exon4:c.C1191T:p.F397F,ENSG00000124459:ENST00000269973:exon10:c.C1191T:p.F397F	Score=432;Name=lod=76	NA	19q13.31	NA	Name=SETDB1	NA	NA	rs140417622	0.01	0.01	0.009	0.00559105	0.0219	NA	0.0043	0.0023	NA	0.03	NA	0.01	NA	0.0085	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.820974	NA	NA	0.014186	0.002951	NA	NA	NA	7.6220806
890	14	24772965	24772965	C	A	exonic	NOP9	NA	synonymous SNV	NOP9:NM_174913:exon7:c.C1312A:p.R438R	exonic	ENSG00000196943	NA	synonymous SNV	ENSG00000196943:ENST00000267425:exon7:c.C1312A:p.R438R,ENSG00000196943:ENST00000396802:exon7:c.C1312A:p.R438R	Score=583;Name=lod=312	NA	14q12	Score=810;Name=V$STAT1_01	NA	NA	NA	rs116960868	0.01	0.01	0.005	0.00519169	0.0189	NA	0.0101	NA	NA	0.02	NA	0.01	NA	0.0114	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.970395	NA	NA	0.014535	0.003177	NA	NA	NA	7.6218316
890	8	6590126	6590126	A	G	exonic	AGPAT5	NA	synonymous SNV	AGPAT5:NM_018361:exon4:c.A450G:p.K150K	exonic	ENSG00000155189	NA	synonymous SNV	ENSG00000155189:ENST00000285518:exon4:c.A450G:p.K150K	Score=535;Name=lod=199	NA	8p23.1	NA	NA	Name=3	NA	rs17078008	0.03	0.03	0.044	0.0401358	0.0119	NA	0.0144	0.1233	0.0164	0.02	NA	0.01	0.12	0.0224	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.030781	NA	NA	0.011047	0.094871	NA	0.087	NA	7.6213196
890	17	66267691	66267691	A	T	exonic	SLC16A6	NA	nonsynonymous SNV	SLC16A6:NM_004694:exon5:c.T610A:p.F204I,SLC16A6:NM_001174166:exon6:c.T610A:p.F204I	exonic	ENSG00000108932	NA	nonsynonymous SNV	ENSG00000108932:ENST00000580666:exon5:c.T610A:p.F204I,ENSG00000108932:ENST00000327268:exon6:c.T610A:p.F204I	NA	NA	17q24.2	NA	NA	NA	NA	rs7222013	0.33	0.33	0.336	0.379593	0.1928	0.247	0.3746	0.6853	0.2986	0.17	0.24	0.37	0.66	0.2857	0.66	0.24	T	0.0	B	0.0	B	0.196	N	1.000	P	-2.015	N	3.77	T	-1.072	T	0.000	T	0.083	-1.881	0.008	-0.528	-0.690	-2.006	6.187	-1.881272	NA	1	0.233953	0.625965	NA	0.297	NA	7.6208804
890	11	6411935	6411935	T	C	exonic	SMPD1	NA	nonsynonymous SNV	SMPD1:NM_000543:exon1:c.T107C:p.V36A,SMPD1:NM_001007593:exon1:c.T107C:p.V36A	exonic	ENSG00000166311	NA	nonsynonymous SNV	ENSG00000166311:ENST00000299397:exon1:c.T107C:p.V36A,ENSG00000166311:ENST00000342245:exon1:c.T107C:p.V36A,ENSG00000166311:ENST00000356761:exon1:c.T107C:p.V36A,ENSG00000166311:ENST00000527275:exon1:c.T107C:p.V36A,ENSG00000166311:ENST00000531303:exon1:c.T107C:p.V36A,ENSG00000166311:ENST00000533123:exon1:c.T107C:p.V36A,ENSG00000166311:ENST00000534405:exon1:c.T107C:p.V36A	NA	NA	11p15.4	Score=876;Name=V$CP2_01	NA	NA	NA	rs1050228	0.59	0.59	0.518	0.561302	0.5905	0.8075	0.6729	0.202	0.684	0.64	0.81	0.62	0.22	0.558	0.81	0.45	T	0.0	B	0.0	B	0.916	N	1.000	P	-1.59	N	3.0	T	-1.056	T	0.000	T	0.08	1.175	9.778	0.672	0.243	0.500	7.084	1.174552	NA	0.43	0.564915	0.240512	ID=COSM1561695,COSM1561696;OCCURENCE=1(large_intestine)	0.326	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000079189.1;CLNDSDB=.;CLNDSDBID=.	7.6199184
890	5	79026187	79026187	A	G	exonic	CMYA5	NA	synonymous SNV	CMYA5:NM_153610:exon2:c.A1599G:p.E533E	exonic	ENSG00000164309	NA	synonymous SNV	ENSG00000164309:ENST00000446378:exon2:c.A1599G:p.E533E	Score=376;Name=lod=45	NA	5q14.1	Score=910;Name=V$OCT1_03	NA	NA	NA	rs17253860	0.01	0.01	0.004	0.00539137	0.0139	NA	0.013	0.0008	0.0031	0.01	NA	0.01	0.002	0.0143	0.019	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.463804	NA	NA	0.019507	0.003753	NA	0.014	NA	7.6189596
890	6	111585121	111585121	C	T	exonic	KIAA1919	NA	synonymous SNV	KIAA1919:NM_153369:exon3:c.C285T:p.F95F	exonic	ENSG00000173214	NA	synonymous SNV	ENSG00000173214:ENST00000368847:exon3:c.C285T:p.F95F	Score=333;Name=lod=30	NA	6q21	NA	Name=p300,GATA-1,c-Jun	NA	NA	rs139062302	0.02	0.02	0.004	0.0101837	0.0169	NA	0.0418	0.0015	0.0031	0.02	NA	0.05	0.002	0.0179	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.613849	NA	NA	0.013605	0.003404	NA	0.014	NA	7.6182616
890	1	214837110	214837110	C	G	exonic	CENPF	NA	nonsynonymous SNV	CENPF:NM_016343:exon20:c.C9318G:p.N3106K	exonic	ENSG00000117724	NA	nonsynonymous SNV	ENSG00000117724:ENST00000366955:exon20:c.C9318G:p.N3106K	NA	NA	1q41	NA	NA	NA	NA	rs7289	0.63	0.63	0.608	0.63099	0.5606	0.8889	0.6772	0.3775	0.7474	0.58	0.92	0.63	0.38	0.608	0.92	1	T	0.0	B	0.0	B	0.073	N	1.000	P	-1.265	N	4.04	T	-1.012	T	0.000	T	0.017	-0.558	1.479	3.74	1.189	0.548	4.434	-0.557762	NA	1	0.547558	0.418747	NA	0.5	NA	7.6171754
890	9	34256347	34256347	C	T	exonic	KIF24	NA	synonymous SNV	KIF24:NM_194313:exon11:c.G3258A:p.G1086G	exonic	ENSG00000186638	NA	synonymous SNV	ENSG00000186638:ENST00000379174:exon7:c.G2856A:p.G952G,ENSG00000186638:ENST00000345050:exon8:c.G2856A:p.G952G,ENSG00000186638:ENST00000402558:exon10:c.G3258A:p.G1086G,ENSG00000186638:ENST00000379166:exon11:c.G3258A:p.G1086G	NA	NA	9p13.3	NA	Name=CTCF_(SC-5916),CTCF_(C-20),SMC3_(ab9263),Rad21,CTCF	Name=37	NA	rs10814083	0.42	0.42	0.416	0.440096	0.3082	0.7351	0.4006	0.2685	0.5317	0.32	0.69	0.38	0.29	0.4001	0.69	0.2	T	.	.	.	.	0.979	N	1.000	P	.	.	.	.	-0.954	T	0.000	T	.	-0.268	2.713	0.37	-0.012	-0.091	6.452	-0.268302	NA	NA	0.341395	0.278257	NA	0.283	NA	7.6169716
890	19	17367435	17367435	T	C	exonic	USHBP1	NA	nonsynonymous SNV	USHBP1:NM_031941:exon9:c.A1315G:p.M439V	exonic	ENSG00000130307	NA	nonsynonymous SNV	ENSG00000130307:ENST00000431146:exon8:c.A1123G:p.M375V,ENSG00000130307:ENST00000252597:exon9:c.A1315G:p.M439V	Score=321;Name=lod=27	NA	19p13.11	NA	NA	NA	NA	rs9676419	0.32	0.32	0.313	0.329473	0.2336	0.2758	0.3098	0.4735	0.3027	0.23	0.26	0.28	0.54	0.2649	0.54	1	T	0.0	B	0.0	B	0.041	N	0.000	P	-1.935	N	2.91	T	-0.973	T	0.000	T	0.033	-2.114	0.006	-0.346	-0.123	-0.030	6.393	-2.114278	NA	1	0.218488	0.444167	ID=COSM1129959;OCCURENCE=1(prostate),1(large_intestine)	0.377	NA	7.6163454
890	1	91405699	91405699	G	A	exonic	ZNF644	NA	synonymous SNV	ZNF644:NM_201269:exon3:c.C1212T:p.T404T	exonic	ENSG00000122482	NA	synonymous SNV	ENSG00000122482:ENST00000337393:exon3:c.C1212T:p.T404T,ENSG00000122482:ENST00000370440:exon3:c.C1212T:p.T404T	Score=714;Name=lod=1059	NA	1p22.2	Score=760;Name=V$TCF11MAFG_01	NA	NA	NA	rs41286763	0.01	0.01	0.01	0.0123802	0.0199	0.0129	0.0101	0.0008	0.0215	0.02	0.01	0.02	0.002	0.0149	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.476291	NA	NA	0.016047	0.002952	NA	0.007	NA	7.6158196
890	20	31596472	31596472	A	T	exonic	BPIFB2	NA	nonsynonymous SNV	BPIFB2:NM_025227:exon2:c.A92T:p.K31M	exonic	ENSG00000078898	NA	nonsynonymous SNV	ENSG00000078898:ENST00000170150:exon2:c.A92T:p.K31M	NA	NA	20q11.21	NA	Name=TAF1	NA	NA	rs6088066	0.15	0.15	0.151	0.136781	0.2406	0.0089	0.1527	0.1641	0.1135	0.24	0.01	0.18	0.18	0.2542	0.24	0.26	T	0.139	B	0.027	B	0.619	N	1.000	P	0.805	L	3.44	T	-0.903	T	0.000	T	0.045	3.291	17.05	-0.229	-0.154	0.371	3.778	3.290903	3.290903	0.01	0.223308	0.181798	NA	0.087	NA	7.6152254
890	12	133768553	133768553	A	T	exonic	ZNF268	NA	nonsynonymous SNV	ZNF268:NM_001165887:exon4:c.A220T:p.M74L,ZNF268:NM_001165881:exon5:c.A421T:p.M141L,ZNF268:NM_001165882:exon5:c.A172T:p.M58L,ZNF268:NM_003415:exon5:c.A421T:p.M141L,ZNF268:NM_152943:exon5:c.A421T:p.M141L	exonic	ENSG00000090612,ENSG00000256825	NA	nonsynonymous SNV	ENSG00000090612:ENST00000592241:exon4:c.A220T:p.M74L,ENSG00000090612:ENST00000228289:exon5:c.A421T:p.M141L,ENSG00000090612:ENST00000500625:exon5:c.A172T:p.M58L,ENSG00000090612:ENST00000536435:exon5:c.A421T:p.M141L,ENSG00000090612:ENST00000541009:exon5:c.A421T:p.M141L,ENSG00000090612:ENST00000542986:exon5:c.A376T:p.M126L,ENSG00000090612:ENST00000416488:exon9:c.A916T:p.M306L,ENSG00000256825:ENST00000540096:exon9:c.A916T:p.M306L	NA	NA	12q24.33	NA	NA	NA	NA	rs61960670	0.14	0.14	0.127	0.144169	0.2396	0.1121	0.1571	0.0083	0.2536	0.24	0.11	0.17	0.01	0.213	0.27	.	.	0.0	B	0.001	B	.	.	1.000	P	.	.	5.93	T	-0.900	T	0.000	T	0.215	-1.194	0.076	-2.54	-0.679	-0.439	5.150	-1.193631	NA	0.23	0.265569	0.05	NA	0.051	NA	7.6151644
891	6	138413333	138413333	G	C	exonic	PERP	NA	nonsynonymous SNV	PERP:NM_022121:exon3:c.C428G:p.P143R	exonic	ENSG00000112378	NA	nonsynonymous SNV	ENSG00000112378:ENST00000421351:exon3:c.C428G:p.P143R	NA	NA	6q23.3	NA	NA	NA	NA	rs648802	0.58	0.58	0.547	0.63119	0.5775	0.7222	0.5274	0.5507	0.7751	0.57	0.67	0.54	0.52	0.5901	0.67	0.66	T	0.046	B	0.04	B	0.606	N	1.000	P	0.69	N	-2.45	D	-0.900	T	0.197	T	0.079	0.225	5.215	-2.56	-0.508	-0.125	2.075	0.225135	NA	0.76	0.551744	0.530867	NA	0.572	NA	7.6139894
891	6	35980121	35980121	C	T	exonic	SLC26A8	NA	nonsynonymous SNV	SLC26A8:NM_001193476:exon3:c.G217A:p.V73M,SLC26A8:NM_052961:exon3:c.G217A:p.V73M,SLC26A8:NM_138718:exon3:c.G217A:p.V73M	exonic	ENSG00000112053	NA	nonsynonymous SNV	ENSG00000112053:ENST00000355574:exon3:c.G217A:p.V73M,ENSG00000112053:ENST00000394602:exon3:c.G217A:p.V73M,ENSG00000112053:ENST00000490799:exon3:c.G217A:p.V73M,ENSG00000112053:ENST00000480663:exon4:c.G475A:p.V159M	NA	NA	6p21.31	NA	NA	NA	NA	rs743923	0.25	0.25	0.266	0.260982	0.2366	0.1151	0.2277	0.4652	0.184	0.24	0.13	0.26	0.42	0.2386	0.42	0.37	T	0.003	B	0.001	B	0.401	N	1.000	P	-0.895	N	0.9	T	-0.973	T	0.009	T	0.096	0.171	4.919	-2.58	-0.450	0.027	1.985	0.170748	NA	0.53	0.246395	0.411938	NA	0.384	NA	7.6117384
891	10	429977	429977	G	A	exonic	DIP2C	NA	synonymous SNV	DIP2C:NM_014974:exon16:c.C1866T:p.G622G	exonic	ENSG00000151240	NA	synonymous SNV	ENSG00000151240:ENST00000280886:exon16:c.C1866T:p.G622G,ENSG00000151240:ENST00000381496:exon17:c.C1545T:p.G515G	NA	NA	10p15.3	NA	NA	NA	NA	rs10904083	0.37	0.37	0.388	0.38139	0.332	0.4623	0.4135	0.2776	0.4663	0.34	0.48	0.42	0.24	0.3859	0.48	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.997	T	0.000	T	.	-1.214	0.065	-10.9	-2.431	-1.514	3.035	-1.214238	NA	NA	0.337791	0.287789	ID=COSM1128057;OCCURENCE=1(prostate),1(large_intestine)	0.413	NA	7.6109756
891	19	11998756	11998756	C	T	exonic	ZNF69	NA	synonymous SNV	ZNF69:NM_021915:exon1:c.C18T:p.H6H	exonic	ENSG00000198429	NA	synonymous SNV	ENSG00000198429:ENST00000340180:exon1:c.C18T:p.H6H,ENSG00000198429:ENST00000429654:exon1:c.C18T:p.H6H,ENSG00000198429:ENST00000445911:exon1:c.C18T:p.H6H	NA	NA	19p13.2	NA	Name=Pol2,HNF4G_(SC-6558),JunD,TBP,HEY1,ZBTB7A_(SC-34508)	Name=118	NA	rs3810315	0.01	0.01	0.013	0.0129792	0.0229	0.006	0.0144	0.0023	0.0235	0.02	0.01	0.02	0.01	0.0149	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.957838	NA	NA	0.018023	0.005447	NA	0.007	NA	7.6108436
891	7	75687396	75687396	G	A	exonic	MDH2	NA	synonymous SNV	MDH2:NM_005918:exon4:c.G429A:p.P143P	exonic	ENSG00000146701	NA	synonymous SNV	ENSG00000146701:ENST00000443006:exon3:c.G108A:p.P36P,ENSG00000146701:ENST00000315758:exon4:c.G429A:p.P143P,ENSG00000146701:ENST00000432020:exon4:c.G429A:p.P143P	Score=521;Name=lod=174	NA	7q11.23	NA	NA	Name=9	NA	rs11538801	0.01	0.01	0.007	0.0125799	0.0219	0.001	0.0115	0.0008	0.0317	0.02	NA	0.0028	0.0041	0.0187	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.618477	1.618477	NA	0.01593	0.003177	NA	NA	NA	7.6101366
891	14	20444441	20444441	C	A	exonic	OR4K15	NA	nonsynonymous SNV	OR4K15:NM_001005486:exon1:c.C764A:p.A255E	exonic	ENSG00000169488	NA	nonsynonymous SNV	ENSG00000169488:ENST00000305051:exon1:c.C764A:p.A255E	NA	NA	14q11.2	NA	NA	NA	NA	rs10135246	0.18	0.18	0.163	0.215655	0.2227	0.123	0.1715	0.2042	0.3507	0.23	0.11	0.18	0.18	0.2356	0.27	0.75	T	0.199	B	0.093	B	0.004	N	1.000	P	-0.32	N	8.9	T	-1.288	T	0.000	T	0.127	-0.476	1.804	2.06	0.886	0.606	7.336	-0.476388	NA	0.18	0.265465	0.228779	NA	0.188	NA	7.6095684
891	14	65008251	65008251	C	T	exonic	HSPA2	NA	synonymous SNV	HSPA2:NM_021979:exon1:c.C684T:p.D228D	exonic	ENSG00000126803	NA	synonymous SNV	ENSG00000126803:ENST00000247207:exon1:c.C684T:p.D228D,ENSG00000126803:ENST00000394709:exon2:c.C684T:p.D228D	Score=765;Name=lod=1711	NA	14q23.3	Score=915;Name=V$AREB6_01	Name=CTCF	Name=33	NA	rs1063391	0.68	0.68	0.622	0.652556	0.6819	0.8601	0.696	0.3956	0.7249	0.7	0.85	0.7	0.44	0.6924	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.391762	NA	NA	0.683372	0.439174	NA	0.652	NA	7.6089946
891	17	10297658	10297658	A	G	exonic	MYH8	NA	nonsynonymous SNV	MYH8:NM_002472:exon35:c.T5074C:p.W1692R	exonic	ENSG00000133020	NA	nonsynonymous SNV	ENSG00000133020:ENST00000403437:exon35:c.T5074C:p.W1692R	Score=528;Name=lod=187	NA	17p13.1	NA	NA	NA	NA	rs8069834	0.5	0.5	0.476	0.485423	0.6322	0.124	0.4856	0.7595	0.3364	0.62	0.12	0.49	0.75	0.5096	0.75	1	T	0.0	B	0.0	B	0.002	N	1.000	P	-3.88	N	-0.82	T	-0.892	T	0.000	T	0.076	-0.455	1.894	1.84	0.017	0.948	8.832	-0.45481	NA	1	0.583043	0.720835	NA	0.449	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117692.1;CLNDSDB=.;CLNDSDBID=.	7.6084904
891	12	6167196	6167196	A	G	exonic	VWF	NA	synonymous SNV	VWF:NM_000552:exon14:c.T1548C:p.Y516Y	exonic	ENSG00000110799	NA	synonymous SNV	ENSG00000110799:ENST00000261405:exon14:c.T1548C:p.Y516Y	NA	NA	12p13.31	Score=952;Name=V$STAT_01	Name=CTCF,YY1_(C-20),CTCF_(SC-5916)	Name=7	NA	rs1800379	0.38	0.38	0.389	0.376997	0.3628	0.2103	0.2709	0.6422	0.2802	0.37	0.2	0.31	0.68	0.3447	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.162491	NA	NA	0.350769	0.587392	ID=COSM1162475;OCCURENCE=1(pancreas),1(large_intestine)	0.5	NA	7.6083976
891	1	110170896	110170896	T	C	exonic	AMPD2	NA	synonymous SNV	AMPD2:NM_203404:exon8:c.T1077C:p.H359H,AMPD2:NM_001257361:exon10:c.T1080C:p.H360H,AMPD2:NM_004037:exon10:c.T1434C:p.H478H,AMPD2:NM_139156:exon10:c.T1191C:p.H397H,AMPD2:NM_001257360:exon11:c.T1434C:p.H478H	exonic	ENSG00000116337	NA	synonymous SNV	ENSG00000116337:ENST00000393688:exon8:c.T1077C:p.H359H,ENSG00000116337:ENST00000358729:exon9:c.T1209C:p.H403H,ENSG00000116337:ENST00000256578:exon10:c.T1434C:p.H478H,ENSG00000116337:ENST00000342115:exon10:c.T1191C:p.H397H,ENSG00000116337:ENST00000528454:exon10:c.T1080C:p.H360H,ENSG00000116337:ENST00000528667:exon11:c.T1434C:p.H478H	Score=461;Name=lod=100	NA	1p13.3	Score=841;Name=V$ELK1_01	NA	Name=9	NA	rs863978	0.78	0.78	0.783	0.807708	0.6769	0.9802	0.7695	0.7337	0.8916	0.67	0.98	0.75	0.75	0.7353	0.98	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.028	T	0.058	T	.	0.614	7.305	-1.77	-0.169	-0.772	10.082	0.613917	NA	NA	0.647442	0.756015	NA	0.783	NA	7.6070246
891	18	61564394	61564394	A	G	exonic	SERPINB2	NA	nonsynonymous SNV	SERPINB2:NM_002575:exon4:c.A358G:p.N120D,SERPINB2:NM_001143818:exon5:c.A358G:p.N120D	exonic	ENSG00000197632	NA	nonsynonymous SNV	ENSG00000197632:ENST00000299502:exon4:c.A358G:p.N120D,ENSG00000197632:ENST00000443281:exon4:c.A358G:p.N120D,ENSG00000197632:ENST00000413956:exon5:c.A358G:p.N120D,ENSG00000197632:ENST00000457692:exon5:c.A358G:p.N120D	NA	NA	18q21.33	NA	NA	NA	NA	rs6098	0.33	0.33	0.315	0.349042	0.2296	0.499	0.3559	0.3661	0.2894	0.22	0.46	0.33	0.35	0.2788	0.46	.	.	0.0	B	0.0	B	0.741	N	1.000	P	-0.965	N	2.85	T	-0.975	T	0.000	T	0.025	1.22	9.952	4.13	0.865	0.618	6.718	1.220485	NA	1	0.218372	0.369042	NA	0.283	NA	7.6065614
891	1	19413261	19413261	T	A	exonic	UBR4	NA	nonsynonymous SNV	UBR4:NM_020765:exon100:c.A14599T:p.M4867L	exonic	ENSG00000127481	NA	nonsynonymous SNV	ENSG00000127481:ENST00000429347:exon10:c.A1168T:p.M390L,ENSG00000127481:ENST00000543981:exon12:c.A1591T:p.M531L,ENSG00000127481:ENST00000375224:exon15:c.A1720T:p.M574L,ENSG00000127481:ENST00000375217:exon100:c.A14578T:p.M4860L,ENSG00000127481:ENST00000375226:exon100:c.A14527T:p.M4843L,ENSG00000127481:ENST00000375254:exon100:c.A14599T:p.M4867L,ENSG00000127481:ENST00000375267:exon100:c.A14599T:p.M4867L	Score=656;Name=lod=620	NA	1p36.13	NA	NA	NA	NA	rs12584	0.64	0.64	0.623	0.601438	0.5785	0.7589	0.6844	0.5408	0.4857	0.57	0.78	0.66	0.58	0.583	0.78	0.41	T	0.0	B	0.0	B	0.001	N	0.000	P	-0.695	N	1.64	T	-1.040	T	0.000	T	0.079	2.116	13.03	0.893	-0.151	2.616	5.268	2.115935	2.115935	0.08	0.565814	0.548343	NA	0.652	NA	7.6060194
891	15	65804892	65804892	G	A	exonic	DPP8	NA	synonymous SNV	DPP8:NM_197960:exon3:c.C48T:p.N16N,DPP8:NM_197961:exon3:c.C48T:p.N16N	exonic	ENSG00000074603	NA	synonymous SNV	ENSG00000074603:ENST00000558529:exon1:c.C30T:p.N10N,ENSG00000074603:ENST00000341861:exon2:c.C48T:p.N16N,ENSG00000074603:ENST00000395652:exon2:c.C48T:p.N16N,ENSG00000074603:ENST00000559233:exon2:c.C48T:p.N16N,ENSG00000074603:ENST00000321118:exon3:c.C48T:p.N16N,ENSG00000074603:ENST00000321147:exon3:c.C48T:p.N16N,ENSG00000074603:ENST00000339244:exon3:c.C48T:p.N16N,ENSG00000074603:ENST00000560436:exon3:c.C48T:p.N16N	Score=616;Name=lod=427	NA	15q22.31	Score=856;Name=V$OCT1_02	NA	NA	NA	rs118088815	0.01	0.01	0.007	0.0071885	0.0209	NA	0.013	0.0015	0.0041	0.02	NA	0.02	0.002	0.0158	0.024	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.962784	NA	NA	0.024424	0.004543	NA	0.007	NA	7.6055426
891	1	1479333	1479333	A	G	exonic	SSU72	NA	synonymous SNV	SSU72:NM_014188:exon4:c.T399C:p.P133P	exonic	ENSG00000160075	NA	synonymous SNV	ENSG00000160075:ENST00000291386:exon4:c.T399C:p.P133P	NA	NA	1p36.33	Score=833;Name=V$MYCMAX_01	Name=ERalpha_a	Name=17	NA	rs7533	0.62	0.62	0.582	0.69369	0.3062	0.8671	0.5634	0.91	0.7137	0.31	0.85	0.51	0.89	0.4601	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.134869	NA	NA	0.295	0.816841	NA	0.587	NA	7.6053666
892	15	33023098	33023098	C	G	exonic	GREM1	NA	synonymous SNV	GREM1:NM_013372:exon2:c.C207G:p.P69P	exonic	ENSG00000166923	NA	synonymous SNV	ENSG00000166923:ENST00000300177:exon2:c.C207G:p.P69P	NA	NA	15q13.3	NA	Name=USF-1,c-Myc,Egr-1,JunD	Name=80	NA	rs2280738	0.07	0.07	0.057	0.067492	0.0189	0.2113	0.0115	0.0121	0.0838	0.02	0.23	0.01	0.02	0.0365	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.056943	NA	NA	0.007209	0.011358	NA	0.043	NA	7.6040576
892	12	30881809	30881809	T	C	exonic	CAPRIN2	NA	nonsynonymous SNV	CAPRIN2:NM_001002259:exon8:c.A1555G:p.M519V,CAPRIN2:NM_001206856:exon8:c.A1555G:p.M519V,CAPRIN2:NM_023925:exon8:c.A1555G:p.M519V,CAPRIN2:NM_032156:exon8:c.A1555G:p.M519V	exonic	ENSG00000110888	NA	nonsynonymous SNV	ENSG00000110888:ENST00000433722:exon5:c.A793G:p.M265V,ENSG00000110888:ENST00000308433:exon7:c.A556G:p.M186V,ENSG00000110888:ENST00000251071:exon8:c.A1555G:p.M519V,ENSG00000110888:ENST00000298892:exon8:c.A1555G:p.M519V,ENSG00000110888:ENST00000395805:exon8:c.A1555G:p.M519V,ENSG00000110888:ENST00000417045:exon8:c.A1555G:p.M519V,ENSG00000110888:ENST00000537108:exon9:c.A1312G:p.M438V	NA	NA	12p11.21	NA	NA	NA	NA	rs2304630	0.53	0.53	0.546	0.555312	0.5736	0.369	0.3732	0.8192	0.501	0.58	0.36	0.38	0.77	0.5608	0.79	1	T	0.0	B	0.0	B	0.255	N	1.000	P	-0.345	N	3.08	T	-0.995	T	0.000	T	0.02	-2.991	0.001	-4.49	-1.874	-0.854	10.353	-2.991367	NA	1	0.595349	0.786201	NA	0.507	NA	7.6035844
892	1	111494194	111494194	C	T	exonic	LRIF1	NA	nonsynonymous SNV	LRIF1:NM_018372:exon2:c.G1312A:p.A438T	exonic	ENSG00000121931	NA	nonsynonymous SNV	ENSG00000121931:ENST00000369763:exon2:c.G1312A:p.A438T	Score=569;Name=lod=274	NA	1p13.3	NA	NA	NA	NA	rs2232041	0.16	0.16	0.155	0.157748	0.2714	0.0635	0.1081	0.1566	0.1748	0.27	0.05	0.13	0.14	0.2059	0.27	0.1	T	0.024	B	0.017	B	0.679	N	0.000	P	1.39	L	1.5	T	-0.992	T	0.025	T	0.023	0.875	8.548	1.19	0.393	-0.526	4.277	0.874802	NA	0.1	0.252907	0.159328	NA	0.109	NA	7.6031264
892	12	42854208	42854208	A	G	exonic	PRICKLE1	NA	synonymous SNV	PRICKLE1:NM_001144881:exon8:c.T1899C:p.F633F,PRICKLE1:NM_001144882:exon8:c.T1899C:p.F633F,PRICKLE1:NM_001144883:exon8:c.T1899C:p.F633F,PRICKLE1:NM_153026:exon8:c.T1899C:p.F633F	exonic	ENSG00000139174	NA	synonymous SNV	ENSG00000139174:ENST00000345127:exon8:c.T1899C:p.F633F,ENSG00000139174:ENST00000445766:exon8:c.T1899C:p.F633F,ENSG00000139174:ENST00000455697:exon8:c.T1899C:p.F633F,ENSG00000139174:ENST00000548696:exon8:c.T1899C:p.F633F,ENSG00000139174:ENST00000552240:exon8:c.T1899C:p.F633F	Score=452;Name=lod=92	NA	12q12	NA	Name=JunD	NA	NA	rs3747563	0.32	0.32	0.269	0.270567	0.3678	0.256	0.3847	0.1634	0.2495	0.37	0.3	0.43	0.2	0.3459	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.284679	1.284679	NA	0.350349	0.201316	NA	0.304	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118050.2;CLNDSDB=.;CLNDSDBID=.	7.6026176
892	9	138439809	138439809	T	C	exonic	OBP2A	NA	nonsynonymous SNV	OBP2A:NM_014582:exon4:c.T370C:p.Y124H	exonic	ENSG00000122136	NA	nonsynonymous SNV	ENSG00000122136:ENST00000342114:exon3:c.T236C:p.L79P,ENSG00000122136:ENST00000537747:exon3:c.T236C:p.L79P,ENSG00000122136:ENST00000340780:exon4:c.T370C:p.Y124H,ENSG00000122136:ENST00000371776:exon4:c.T370C:p.Y124H,ENSG00000122136:ENST00000471886:exon4:c.T370C:p.Y124H,ENSG00000122136:ENST00000539850:exon4:c.T370C:p.Y124H	NA	NA	9q34.3	NA	NA	NA	NA	rs72766544	0.17	0.17	0.15	0.154353	0.2525	0.1567	0.134	0.0582	0.1953	0.25	0.14	0.17	0.07	0.2168	0.26	0.67	T	0.0	B	0.001	B	0.768	N	1.000	P	-1.04	N	3.01	T	-0.928	T	0.000	T	0.043	-2.311	0.004	-0.067	-0.350	-2.078	1.140	-2.310517	NA	0.57	0.261977	0.093055	NA	0.188	NA	7.6020564
892	1	15909744	15909744	C	T	exonic	AGMAT	NA	nonsynonymous SNV	AGMAT:NM_024758:exon2:c.G419A:p.R140Q	exonic	ENSG00000116771	NA	nonsynonymous SNV	ENSG00000116771:ENST00000375826:exon2:c.G419A:p.R140Q	NA	NA	1p36.21	NA	NA	NA	NA	rs11580170	0.26	0.26	0.277	0.272364	0.2326	0.0565	0.2133	0.5492	0.2035	0.24	0.06	0.27	0.53	0.2511	0.53	0.62	T	0.016	B	0.042	B	0.071	N	0.610	P	0.575	N	-1.79	D	-0.950	T	0.000	T	0.067	0.792	8.173	1.23	0.280	0.542	8.486	0.792103	NA	0.39	0.247674	0.524512	NA	0.283	NA	7.6019594
892	11	94731759	94731759	G	A	exonic	KDM4D	NA	nonsynonymous SNV	KDM4D:NM_018039:exon3:c.G1223A:p.R408Q	exonic	ENSG00000186280	NA	nonsynonymous SNV	ENSG00000186280:ENST00000536741:exon2:c.G1223A:p.R408Q,ENSG00000186280:ENST00000335080:exon3:c.G1223A:p.R408Q	NA	NA	11q21	NA	NA	NA	NA	rs3740853	0.32	0.32	0.289	0.320487	0.2207	0.6468	0.3213	0.0976	0.3875	0.24	0.62	0.31	0.12	0.2875	0.62	0.58	T	0.294	B	0.033	B	0.158	U	1.000	P	0	N	1.69	T	-0.949	T	0.000	T	0.057	0.76	8.021	-0.698	-0.125	-1.095	4.659	0.759683	NA	0.43	0.223243	0.120854	NA	0.174	NA	7.6018904
892	13	45975241	45975241	T	G	exonic	SLC25A30	NA	synonymous SNV	SLC25A30:NM_001010875:exon7:c.A591C:p.G197G	exonic	ENSG00000174032	NA	synonymous SNV	ENSG00000174032:ENST00000539591:exon6:c.A438C:p.G146G,ENSG00000174032:ENST00000519676:exon7:c.A591C:p.G197G	Score=592;Name=lod=338	NA	13q14.13	Score=787;Name=V$AHR_01	NA	NA	NA	rs145903350	0.01	0.01	0.002	0.00798722	0.0278	NA	0.013	0.0008	0.002	0.03	NA	0.02	NA	0.019	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.828444	NA	NA	0.018488	0.003177	NA	0.007	NA	7.6013786
892	19	9949152	9949152	G	A	exonic	PIN1	NA	synonymous SNV	PIN1:NM_006221:exon2:c.G99A:p.Q33Q	exonic	ENSG00000127445	NA	synonymous SNV	ENSG00000127445:ENST00000247970:exon2:c.G99A:p.Q33Q,ENSG00000127445:ENST00000587625:exon2:c.G99A:p.Q33Q,ENSG00000127445:ENST00000588695:exon2:c.G99A:p.Q33Q	Score=561;Name=lod=253	NA	19p13.2	Score=1000;Name=V$AP2REP_01	NA	NA	NA	rs2233682	0.07	0.07	0.056	0.0838658	0.005	0.0387	0.1095	0.1989	0.0378	0.004	0.04	0.1	0.19	0.0518	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.07265	NA	NA	0.008496	0.166515	NA	0.065	NA	7.6013706
892	6	26033506	26033506	G	A	exonic	HIST1H2AB	NA	synonymous SNV	HIST1H2AB:NM_003513:exon1:c.C291T:p.L97L	exonic	ENSG00000137259	NA	synonymous SNV	ENSG00000137259:ENST00000259791:exon1:c.C291T:p.L97L	Score=635;Name=lod=508	NA	6p22.2	Score=844;Name=V$AHRARNT_01	Name=CCNT2,ELF1_(SC-631),HEY1,CHD2_(N-1250),Pol2,HA-E2F1,Pol2-4H8,E2F1,E2F6	Name=125	NA	rs2230655	0.79	0.79	0.774	0.781949	0.672	0.8601	0.7219	0.9448	0.637	0.66	0.9	0.72	0.93	0.7049	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.568342	NA	NA	0.688953	0.903995	NA	0.746	NA	7.6008136
892	2	73677898	73677898	G	C	exonic	ALMS1	NA	nonsynonymous SNV	ALMS1:NM_015120:exon8:c.G4241C:p.G1414A	exonic	ENSG00000116127	NA	nonsynonymous SNV	ENSG00000116127:ENST00000409009:exon7:c.G4115C:p.G1372A,ENSG00000116127:ENST00000264448:exon8:c.G4241C:p.G1414A,ENSG00000116127:ENST00000377715:exon8:c.G4241C:p.G1414A	NA	NA	2p13.1	NA	NA	NA	NA	rs6546837	0.34	0.34	0.353	0.363618	0.2266	0.0089	0.3905	0.8782	0.1554	0.23	0.01	0.35	0.87	0.2681	0.87	1	T	0.0	B	0.0	B	0.921	N	1.000	P	-0.75	N	3.55	T	-1.004	T	0.000	T	0.045	-1.493	0.017	-0.18	-0.286	-2.366	5.890	-1.493229	NA	1	0.237898	0.73826	NA	0.435	NA	7.6007354
892	12	26749945	26749945	G	A	exonic	ITPR2	NA	synonymous SNV	ITPR2:NM_002223:exon31:c.C4125T:p.H1375H	exonic	ENSG00000123104	NA	synonymous SNV	ENSG00000123104:ENST00000381340:exon31:c.C4125T:p.H1375H	Score=696;Name=lod=900	NA	12p11.23	Score=794;Name=V$OLF1_01	NA	NA	NA	rs2230374	0.01	0.01	0.011	0.0071885	0.0229	NA	0.0187	NA	NA	0.02	NA	0.02	NA	0.0173	0.026	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.939884	NA	NA	0.025912	0.004733	NA	0.007	NA	7.6005546
892	19	16060658	16060658	A	G	exonic	OR10H4	NA	nonsynonymous SNV	OR10H4:NM_001004465:exon1:c.A841G:p.T281A	exonic	ENSG00000176231	NA	nonsynonymous SNV	ENSG00000176231:ENST00000322107:exon1:c.A841G:p.T281A	NA	NA	19p13.12	NA	NA	NA	NA	rs11880184	0.25	0.25	0.282	0.241813	0.2644	0.0546	0.1772	0.4622	0.1595	0.25	0.07	0.23	0.48	0.2306	0.48	0.06	T	0.051	B	0.084	B	0.018	U	1.000	P	1.975	M	8.48	T	-0.928	T	0.000	T	0.061	-0.13	3.362	0.988	0.700	0.803	2.855	-0.130215	NA	0.01	0.23814	0.419655	NA	0.333	NA	7.6001934
892	19	16060248	16060248	A	G	exonic	OR10H4	NA	nonsynonymous SNV	OR10H4:NM_001004465:exon1:c.A431G:p.H144R	exonic	ENSG00000176231	NA	nonsynonymous SNV	ENSG00000176231:ENST00000322107:exon1:c.A431G:p.H144R	NA	NA	19p13.12	NA	NA	NA	NA	rs16980822	0.25	0.25	0.268	0.241813	0.2644	0.0546	0.1772	0.4622	0.1595	0.25	0.07	0.23	0.48	0.2306	0.48	0.47	T	0.0	B	0.001	B	0.417	N	1.000	P	-0.48	N	1.29	T	-0.908	T	0.000	T	0.022	-0.8	0.676	0.441	-0.004	-2.003	4.571	-0.799908	NA	0.4	0.238256	0.419655	NA	0.333	NA	7.6000774
892	3	72799703	72799703	C	T	exonic	SHQ1	NA	nonsynonymous SNV	SHQ1:NM_018130:exon11:c.G1466A:p.S489N	exonic	ENSG00000144736	NA	nonsynonymous SNV	ENSG00000144736:ENST00000325599:exon11:c.G1466A:p.S489N,ENSG00000144736:ENST00000463369:exon11:c.G1382A:p.S461N	NA	NA	3p13	NA	NA	NA	NA	rs35178407	0.28	0.28	0.302	0.291933	0.2406	0.0367	0.2003	0.6936	0.1299	0.25	0.03	0.18	0.67	0.2435	0.67	1	T	0.0	B	0.0	B	0.013	N	1.000	P	0	N	1.56	T	-1.015	T	0.000	T	0.004	0.082	4.444	-11.0	-4.380	-0.307	5.169	0.082137	NA	1	0.249767	0.618248	NA	0.275	NA	7.5994664
892	1	197874949	197874949	T	C	exonic	C1orf53	NA	synonymous SNV	C1orf53:NM_001024594:exon2:c.T288C:p.D96D	exonic	ENSG00000203724	NA	synonymous SNV	ENSG00000203724:ENST00000367393:exon2:c.T288C:p.D96D	Score=393;Name=lod=53	NA	1q31.3	NA	NA	Name=4	NA	rs2270763	0.34	0.34	0.308	0.359625	0.3668	0.2619	0.3948	0.4123	0.3569	0.34	0.24	0.42	0.38	0.3513	0.45	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.940	T	0.000	T	.	0.913	8.716	-0.891	-0.399	0.140	11.348	0.913213	NA	NA	0.350156	0.402377	NA	0.333	NA	7.5984106
892	2	7164578	7164578	A	G	exonic	RNF144A	NA	synonymous SNV	RNF144A:NM_014746:exon7:c.A588G:p.E196E	exonic	ENSG00000151692	NA	synonymous SNV	ENSG00000151692:ENST00000320892:exon7:c.A588G:p.E196E	Score=586;Name=lod=321	NA	2p25.1	Score=804;Name=V$PAX2_01	NA	NA	NA	rs376219	0.25	0.25	0.217	0.264377	0.3459	0.1696	0.3905	0.1097	0.3978	0.35	0.17	0.36	0.09	0.3438	0.38	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.959	T	0.000	T	.	-0.542	1.539	0.485	-0.138	0.309	10.681	-0.54217	NA	NA	0.379186	0.1532	NA	0.254	NA	7.5977806
892	9	115818949	115818949	A	T	exonic	ZFP37	NA	nonsynonymous SNV	ZFP37:NM_003408:exon1:c.T20A:p.V7D	exonic	ENSG00000136866	NA	nonsynonymous SNV	ENSG00000136866:ENST00000374227:exon1:c.T20A:p.V7D,ENSG00000136866:ENST00000553380:exon1:c.T20A:p.V7D,ENSG00000136866:ENST00000555206:exon1:c.T20A:p.V7D	NA	NA	9q32	NA	Name=SIX5,GRp20,NFKB,CCNT2,IRF1,TBP,SIRT6,Pol2-4H8,KAP1,HA-E2F1,NANOG_(SC-33759),YY1,ELF1_(SC-631),GABP,ETS1,TAF1,YY1_(C-20),Pol2	NA	NA	rs2282076	0.52	0.52	0.516	0.495208	0.5855	0.5288	0.5447	0.382	0.4857	0.59	0.55	0.57	0.33	0.5576	0.59	0.23	T	0.0	B	0.0	B	.	.	1.000	P	0	N	3.55	T	-0.990	T	0.000	T	0.113	-0.856	0.536	-2.19	-0.892	-0.583	0.036	-0.855911	NA	0.81	0.592558	0.430322	NA	0.587	NA	7.5976754
892	15	99434816	99434816	C	A	exonic	IGF1R	NA	synonymous SNV	IGF1R:NM_000875:exon3:c.C903A:p.G301G	exonic	ENSG00000140443	NA	synonymous SNV	ENSG00000140443:ENST00000558355:exon2:c.C540A:p.G180G,ENSG00000140443:ENST00000268035:exon3:c.C903A:p.G301G,ENSG00000140443:ENST00000558762:exon3:c.C903A:p.G301G	Score=556;Name=lod=243	NA	15q26.3	Score=870;Name=V$CHOP_01	NA	NA	NA	rs2229764	0.01	0.01	0.004	0.0129792	0.0219	NA	0.013	0.0023	0.0317	0.02	NA	0.02	0.0041	0.0233	0.025	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.669521	1.669521	NA	0.024901	0.005917	NA	0.007	NA	7.5965656
892	13	47466622	47466622	G	A	exonic	HTR2A	NA	synonymous SNV	HTR2A:NM_001165947:exon2:c.C264T:p.D88D,HTR2A:NM_000621:exon3:c.C516T:p.D172D	exonic	ENSG00000102468	NA	synonymous SNV	ENSG00000102468:ENST00000378688:exon2:c.C516T:p.D172D,ENSG00000102468:ENST00000543956:exon2:c.C264T:p.D88D,ENSG00000102468:ENST00000542664:exon3:c.C516T:p.D172D	Score=445;Name=lod=86	NA	13q14.2	Score=788;Name=V$PAX2_01	NA	NA	NA	rs6305	0.02	0.02	0.015	0.0091853	0.0229	NA	0.0259	0.0023	0.002	0.03	NA	0.04	0.002	0.0177	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.260052	1.260052	NA	0.029535	0.004085	NA	0.022	NA	7.5965316
892	12	109971481	109971481	C	G	intronic	UBE3B	NA	NA	NA	exonic	ENSG00000151148	NA	nonsynonymous SNV	ENSG00000151148:ENST00000535089:exon4:c.C296G:p.P99R,ENSG00000151148:ENST00000605142:exon4:c.C368G:p.P123R	NA	NA	12q24.11	NA	Name=GATA-2	NA	NA	rs12303137	0.19	0.19	0.19	0.176518	0.2654	0.0734	0.1715	0.1838	0.1851	0.27	0.07	0.21	0.18	0.3051	0.27	0.04	D	.	.	.	.	.	.	1.000	P	.	.	-0.31	T	-1.078	T	0.000	T	0.199	0.61	7.288	1.6	0.451	0.260	4.782	0.610432	NA	NA	NA	NA	NA	0.225	NA	7.5961667
893	1	1179800	1179800	G	A	exonic	FAM132A	NA	synonymous SNV	FAM132A:NM_001014980:exon2:c.C255T:p.G85G	exonic	ENSG00000184163	NA	synonymous SNV	ENSG00000184163:ENST00000330388:exon2:c.C255T:p.G85G	NA	NA	1p36.33	NA	Name=ZBTB7A_(SC-34508),ELF1_(SC-631),ZNF263,YY1	Name=15	NA	rs115586508	0.01	0.01	0.01	0.00878594	0.0229	NA	0.0043	NA	0.0184	0.03	NA	0.01	NA	0.0203	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.459421	NA	NA	0.03036	0.006428	NA	0.007	NA	7.5931066
893	1	112018657	112018657	G	A	exonic	C1orf162	NA	nonsynonymous SNV	C1orf162:NM_174896:exon2:c.G7A:p.G3S	exonic	ENSG00000143110	NA	nonsynonymous SNV	ENSG00000143110:ENST00000343534:exon2:c.G7A:p.G3S,ENSG00000143110:ENST00000369718:exon2:c.G7A:p.G3S	NA	NA	1p13.2	NA	NA	NA	NA	rs6703267	0.19	0.19	0.201	0.190096	0.2386	0.1379	0.1398	0.2042	0.2106	0.23	0.13	0.17	0.2	0.2344	0.27	1	T	0.408	B	0.045	B	0.274	N	1.000	P	0.345	N	0.88	T	-1.097	T	0.012	T	0.034	2.978	15.93	-1.89	-0.329	-1.138	0.946	2.978115	2.978115	1	0.267442	0.200409	NA	0.203	NA	7.5928914
893	12	64062132	64062132	G	A	exonic	DPY19L2	NA	synonymous SNV	DPY19L2:NM_173812:exon1:c.C42T:p.S14S	exonic	ENSG00000177990	NA	synonymous SNV	ENSG00000177990:ENST00000306389:exon1:c.C42T:p.S14S,ENSG00000177990:ENST00000324472:exon1:c.C42T:p.S14S,ENSG00000177990:ENST00000542209:exon2:c.C42T:p.S14S	NA	NA	12q14.2	NA	Name=ZNF263	Name=108	NA	rs11175111	0.05	0.05	0.041	0.091254	0.0119	0.1329	0.0231	0.121	0.138	0.01	0.1	0.02	0.07	0.0467	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.106399	NA	NA	0.015244	0.077988	NA	0.029	NA	7.5928226
893	16	1538464	1538464	C	T	exonic	PTX4	NA	nonsynonymous SNV	PTX4:NM_001013658:exon1:c.G5A:p.G2E	exonic	ENSG00000251692	NA	nonsynonymous SNV	ENSG00000251692:ENST00000293922:exon1:c.G5A:p.G2E	NA	NA	16p13.3	NA	NA	NA	NA	rs2745103	0.29	0.29	0.276	0.257788	0.2416	0.497	0.1945	0.1316	0.2434	0.26	0.54	0.19	0.12	0.2451	0.54	0	D	0.18	B	0.068	B	0.000	N	1.000	P	.	.	3.19	T	-0.915	T	0.000	T	0.063	0.226	5.219	0.856	0.260	0.239	4.118	0.226002	NA	0	0.254302	0.134379	NA	0.355	NA	7.5923314
893	6	26104448	26104448	A	G	exonic	HIST1H4C	NA	synonymous SNV	HIST1H4C:NM_003542:exon1:c.A273G:p.L91L	exonic	ENSG00000197061	NA	synonymous SNV	ENSG00000197061:ENST00000377803:exon1:c.A273G:p.L91L	Score=551;Name=lod=232	NA	6p22.2	NA	Name=ZNF263,E2F6,Pol2-4H8,Sin3Ak-20,Ini1,Pol2(phosphoS2),Pol2,HMGN3,POU2F2,ELK4,Pol2(b),BRF2,GATA-1,IRF1,CTCF,CTCF_(C-20),Oct-2,HEY1,CCNT2,c-Myc	Name=148	NA	rs198852	0.24	0.24	0.237	0.246006	0.3708	0.1379	0.3055	0.1059	0.3763	0.39	0.11	0.31	0.12	0.3325	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.198528	NA	NA	0.371395	0.164094	NA	0.297	NA	7.5919716
893	4	84230033	84230033	C	T	exonic	HPSE	NA	synonymous SNV	HPSE:NM_001199830:exon7:c.G882A:p.A294A,HPSE:NM_001098540:exon8:c.G1056A:p.A352A,HPSE:NM_006665:exon9:c.G1056A:p.A352A	exonic	ENSG00000173083	NA	synonymous SNV	ENSG00000173083:ENST00000513463:exon7:c.G882A:p.A294A,ENSG00000173083:ENST00000311412:exon8:c.G1056A:p.A352A,ENSG00000173083:ENST00000405413:exon9:c.G1056A:p.A352A,ENSG00000173083:ENST00000509906:exon9:c.G1056A:p.A352A	Score=476;Name=lod=115	NA	4q21.23	NA	NA	Name=3	NA	rs139839221	0.01	0.01	0.014	0.00898562	0.0318	NA	0.0144	0.0015	0.001	0.03	NA	0.01	NA	0.0162	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.185534	NA	NA	0.02686	0.003177	NA	0.007	NA	7.5918066
893	5	65108215	65108215	A	G	exonic	NLN	NA	synonymous SNV	NLN:NM_020726:exon12:c.A1977G:p.P659P	exonic	ENSG00000123213	NA	synonymous SNV	ENSG00000123213:ENST00000509935:exon5:c.A774G:p.P258P,ENSG00000123213:ENST00000511299:exon7:c.A1107G:p.P369P,ENSG00000123213:ENST00000502464:exon11:c.A1665G:p.P555P,ENSG00000123213:ENST00000380985:exon12:c.A1977G:p.P659P	Score=603;Name=lod=375	NA	5q12.3	NA	NA	NA	NA	rs2254485	0.68	0.68	0.69	0.699481	0.675	0.5665	0.6066	0.8828	0.68	0.69	0.54	0.63	0.85	0.6968	0.87	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.045	T	0.000	T	.	0.703	7.749	2.96	0.141	1.334	6.385	0.70285	NA	NA	0.703605	0.872447	NA	0.79	NA	7.5912616
893	12	58010163	58010163	A	G	exonic	ARHGEF25	NA	nonsynonymous SNV	ARHGEF25:NM_182947:exon14:c.A1517G:p.Q506R,ARHGEF25:NM_001111270:exon15:c.A1634G:p.Q545R	exonic	ENSG00000240771	NA	nonsynonymous SNV	ENSG00000240771:ENST00000286494:exon14:c.A1517G:p.Q506R,ENSG00000240771:ENST00000333972:exon15:c.A1634G:p.Q545R	Score=378;Name=lod=46	NA	12q13.3	NA	NA	NA	NA	rs1564374	0.64	0.64	0.622	0.630192	0.5527	0.7222	0.6657	0.5197	0.7393	0.58	0.79	0.61	0.58	0.6254	0.79	1	T	0.0	B	0.0	B	0.081	N	1.000	P	-1.1	N	1.23	T	-0.959	T	0.000	T	0.1	-2.115	0.006	3.66	0.659	0.321	7.646	-2.114913	NA	0.86	0.56407	0.534044	NA	0.587	NA	7.5911634
893	1	76199277	76199277	A	C	exonic	ACADM	NA	synonymous SNV	ACADM:NM_000016:exon5:c.A351C:p.T117T,ACADM:NM_001127328:exon5:c.A363C:p.T121T	exonic	ENSG00000117054	NA	synonymous SNV	ENSG00000117054:ENST00000541113:exon4:c.A243C:p.T81T,ENSG00000117054:ENST00000370841:exon5:c.A351C:p.T117T,ENSG00000117054:ENST00000420607:exon5:c.A363C:p.T121T,ENSG00000117054:ENST00000370834:exon6:c.A450C:p.T150T	Score=644;Name=lod=553	NA	1p31.1	NA	NA	NA	NA	rs74090726	0.04	0.04	0.044	0.0401358	0.0179	NA	0.0245	0.1218	0.0051	0.01	NA	0.03	0.13	0.0279	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.39098	1.39098	NA	0.029767	0.103949	NA	0.014	CLINSIG=other|non-pathogenic|non-pathogenic;CLNDBN=Mcad_deficiency\x2c_modifier_of|not_specified|not_provided;CLNREVSTAT=single|single|single;CLNACC=RCV000003783.2|RCV000077887.1|RCV000123475.1;CLNDSDB=.|.|.;CLNDSDBID=.|.|.	7.5910996
893	3	9990800	9990800	G	C	exonic	PRRT3	NA	nonsynonymous SNV	PRRT3:NM_207351:exon2:c.C1000G:p.R334G	exonic	ENSG00000163704	NA	nonsynonymous SNV	ENSG00000163704:ENST00000295984:exon2:c.C1000G:p.R334G,ENSG00000163704:ENST00000411976:exon2:c.C1000G:p.R334G,ENSG00000163704:ENST00000412055:exon2:c.C1000G:p.R334G	NA	NA	3p25.3	NA	NA	NA	NA	rs59465469	0.37	0.37	0.406	0.38139	0.2137	0.1558	0.3256	0.8132	0.2423	0.22	0.21	0.34	0.81	0.282	0.81	.	.	0.0	B	0.0	B	0.022	N	1.000	P	-1.1	N	2.6	T	-1.049	T	0.000	T	0.028	-1.815	0.009	2.22	0.272	0.038	6.311	-1.814685	NA	1	0.248069	0.687078	ID=COSM149328;OCCURENCE=1(stomach)	0.565	NA	7.5895644
893	X	153418468	153418468	G	C	exonic	OPN1LW	NA	synonymous SNV	OPN1LW:NM_020061:exon3:c.G465C:p.V155V	exonic	ENSG00000102076	NA	synonymous SNV	ENSG00000102076:ENST00000442922:exon1:c.G54C:p.V18V,ENSG00000102076:ENST00000369951:exon3:c.G465C:p.V155V	Score=574;Name=lod=286	NA	Xq28	Score=814;Name=V$CEBP_C	NA	NA	NA	rs731614	0.05	0.05	0.01828	NA	NA	NA	NA	NA	NA	0.06	0.07	0.03	0.03	0.0372	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.002192	NA	NA	0.040813	0.026506	NA	0.13	NA	7.5886536
893	4	57356588	57356588	A	G	exonic	SRP72	NA	synonymous SNV	SRP72:NM_001267722:exon12:c.A1227G:p.L409L,SRP72:NM_006947:exon14:c.A1410G:p.L470L	exonic	ENSG00000174780	NA	synonymous SNV	ENSG00000174780:ENST00000510663:exon12:c.A1227G:p.L409L,ENSG00000174780:ENST00000342756:exon14:c.A1410G:p.L470L	Score=571;Name=lod=279	NA	4q12	Score=893;Name=V$RORA1_01	NA	NA	NA	rs17086879	0.07	0.07	0.071	0.0615016	0.0169	0.1865	0.0202	0.0136	0.0726	0.02	0.21	0.04	0.03	0.0415	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.092087	NA	NA	0.02093	0.012483	NA	0.058	NA	7.5873366
893	16	85711860	85711860	C	T	exonic	GINS2	NA	synonymous SNV	GINS2:NM_016095:exon5:c.G516A:p.T172T	exonic	ENSG00000131153	NA	synonymous SNV	ENSG00000131153:ENST00000253462:exon5:c.G516A:p.T172T	Score=511;Name=lod=159	NA	16q24.1	NA	Name=Pol2	Name=2	NA	rs1053328	0.36	0.36	0.359	0.3748	0.3429	0.494	0.3156	0.2859	0.4468	0.36	0.49	0.3	0.25	0.378	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.648043	NA	NA	0.360349	0.304595	NA	0.326	NA	7.5854176
893	5	64892939	64892939	T	G	exonic	TRIM23	NA	synonymous SNV	TRIM23:NM_001656:exon8:c.A1248C:p.G416G,TRIM23:NM_033227:exon8:c.A1248C:p.G416G,TRIM23:NM_033228:exon8:c.A1248C:p.G416G	exonic	ENSG00000113595	NA	synonymous SNV	ENSG00000113595:ENST00000231524:exon8:c.A1248C:p.G416G,ENSG00000113595:ENST00000274327:exon8:c.A1248C:p.G416G,ENSG00000113595:ENST00000381018:exon8:c.A1248C:p.G416G	Score=656;Name=lod=618	NA	5q12.3	Score=927;Name=V$NFAT_Q6	NA	NA	NA	rs33945461	0.06	0.06	0.05	0.0788738	0.0209	0.0893	0.0418	0.1104	0.1115	0.02	0.07	0.04	0.11	0.0397	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.157553	NA	NA	0.021047	0.100091	NA	0.043	NA	7.5850196
894	16	722288	722288	A	G	exonic	RHOT2	NA	synonymous SNV	RHOT2:NM_138769:exon15:c.A1230G:p.G410G	exonic	ENSG00000140983	NA	synonymous SNV	ENSG00000140983:ENST00000315082:exon15:c.A1230G:p.G410G	Score=469;Name=lod=107	NA	16p13.3	Score=823;Name=V$PPARA_01	NA	NA	NA	rs138164898	0.02	0.02	0.025	0.0213658	0.0268	0.0179	0.013	0.0197	0.0276	0.03	0.02	0.01	0.01	0.0258	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.072133	NA	NA	0.030603	0.020464	NA	0.029	NA	7.5834636
894	2	219736472	219736472	G	A	exonic	WNT6	NA	synonymous SNV	WNT6:NM_006522:exon3:c.G567A:p.A189A	exonic	ENSG00000115596	NA	synonymous SNV	ENSG00000115596:ENST00000233948:exon3:c.G567A:p.A189A	NA	NA	2q35	Score=843;Name=V$BRN2_01	NA	Name=4	NA	rs13417214	0.01	0.01	0.011	0.0103834	0.0308	NA	0.0231	0.003	0.001	0.02	NA	0.03	0.01	0.0208	0.032	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.004614	NA	NA	0.03186	0.005906	ID=COSM238447;OCCURENCE=1(prostate)	0.014	NA	7.5832066
894	6	137323213	137323213	G	A	exonic	IL20RA	NA	nonsynonymous SNV	IL20RA:NM_014432:exon7:c.C1144T:p.L382F	exonic	ENSG00000016402	NA	nonsynonymous SNV	ENSG00000016402:ENST00000367748:exon6:c.C811T:p.L271F,ENSG00000016402:ENST00000316649:exon7:c.C1144T:p.L382F,ENSG00000016402:ENST00000541547:exon7:c.C997T:p.L333F	NA	NA	6q23.3	NA	NA	NA	NA	rs1342642	0.21	0.21	0.209	0.199681	0.2594	0.0714	0.183	0.2383	0.2301	0.26	0.08	0.19	0.28	0.2213	0.28	0.11	T	0.93	P	0.592	P	0.003	N	1.000	P	1.78	L	1.76	T	-1.033	T	0.148	T	0.073	2.741	15.12	0.246	0.013	0.732	6.723	2.740564	2.740564	0.17	0.27	0.221743	NA	0.283	NA	7.5826334
894	2	220037666	220037666	A	G	exonic	CNPPD1	NA	nonsynonymous SNV	CNPPD1:NM_015680:exon8:c.T875C:p.L292P	exonic	ENSG00000115649	NA	nonsynonymous SNV	ENSG00000115649:ENST00000360507:exon8:c.T875C:p.L292P,ENSG00000115649:ENST00000409789:exon9:c.T875C:p.L292P,ENSG00000115649:ENST00000453038:exon9:c.T875C:p.L292P	NA	NA	2q35	NA	Name=GATA-1	NA	NA	rs1127102	0.42	0.42	0.404	0.401957	0.6163	0.2302	0.402	0.2421	0.5746	0.63	0.26	0.45	0.27	0.5336	0.63	0.22	T	0.0	B	0.0	B	0.843	N	1.000	P	-0.345	N	2.43	T	-0.962	T	0.000	T	0.316	-0.834	0.589	2.22	0.045	0.941	1.275	-0.833693	NA	0.16	0.600814	0.289832	NA	0.493	NA	7.5826194
894	19	58058536	58058536	A	G	exonic	ZNF550	NA	nonsynonymous SNV	ZNF550:NM_001277090:exon4:c.T1076C:p.I359T,ZNF550:NM_001277091:exon4:c.T1076C:p.I359T,ZNF550:NM_001277092:exon4:c.T1076C:p.I359T	exonic	ENSG00000251369	NA	nonsynonymous SNV	ENSG00000251369:ENST00000506609:exon2:c.T953C:p.I318T,ENSG00000251369:ENST00000325134:exon3:c.T980C:p.I327T,ENSG00000251369:ENST00000376230:exon4:c.T1076C:p.I359T,ENSG00000251369:ENST00000447310:exon4:c.T1076C:p.I359T,ENSG00000251369:ENST00000457177:exon4:c.T1076C:p.I359T	NA	NA	19q13.43	NA	Name=SETDB1	NA	NA	rs1548476	0.64	0.64	0.628	0.656949	0.5547	0.7083	0.6268	0.7035	0.6677	0.56	0.75	0.56	0.68	0.6283	0.75	1	T	0.0	B	0.001	B	.	.	1.000	P	-0.435	N	3.24	T	-0.999	T	0.000	T	0.247	1.711	11.68	-1.59	-0.603	-1.095	4.645	1.7112	1.7112	0.93	0.568488	0.676123	NA	0.638	NA	7.5818454
894	7	30655542	30655542	T	C	exonic	GARS	NA	synonymous SNV	GARS:NM_002047:exon9:c.T1062C:p.F354F	exonic	ENSG00000106105	NA	synonymous SNV	ENSG00000106105:ENST00000389266:exon9:c.T1062C:p.F354F	Score=583;Name=lod=311	NA	7p14.3	Score=817;Name=V$CDP_02	NA	NA	NA	rs11553502	0.03	0.03	0.026	0.0251597	0.0278	NA	0.0288	0.059	NA	0.03	NA	0.02	0.06	0.0251	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.418683	1.418683	NA	0.032508	0.070415	NA	0.043	NA	7.5812586
894	21	46057720	46057720	A	C	exonic	KRTAP10-10	NA	nonsynonymous SNV	KRTAP10-10:NM_181688:exon1:c.A386C:p.Q129P	exonic	ENSG00000221859	NA	nonsynonymous SNV	ENSG00000221859:ENST00000380095:exon1:c.A386C:p.Q129P	Score=376;Name=lod=45	NA	21q22.3	NA	NA	NA	NA	rs4818949	0.25	0.25	0.217	0.278554	0.2425	0.0526	0.2233	0.4773	0.319	0.25	0.05	0.24	0.47	0.2588	0.47	0.51	T	0.012	B	0.01	B	.	.	0.000	P	1.645	L	5.24	T	-1.038	T	0.000	T	0.12	0.501	6.718	-0.050	0.190	0.029	4.401	0.501193	NA	0.2	0.251744	0.447345	NA	0.13	NA	7.5802894
894	1	89273287	89273287	G	A	exonic	PKN2	NA	synonymous SNV	PKN2:NM_006256:exon14:c.G2010A:p.K670K	exonic	ENSG00000065243	NA	synonymous SNV	ENSG00000065243:ENST00000544045:exon9:c.G1032A:p.K344K,ENSG00000065243:ENST00000370505:exon13:c.G1539A:p.K513K,ENSG00000065243:ENST00000370513:exon13:c.G1866A:p.K622K,ENSG00000065243:ENST00000370521:exon14:c.G2010A:p.K670K	Score=609;Name=lod=399	NA	1p22.2	Score=915;Name=V$CEBP_01	NA	NA	NA	rs6671949	0.06	0.06	0.053	0.0650958	0.0348	NA	0.0245	0.1974	0.0133	0.04	NA	0.03	0.19	0.0336	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.353055	2.353055	NA	0.018086	0.171962	NA	0.138	NA	7.5801806
894	3	192516430	192516430	C	T	exonic	MB21D2	NA	synonymous SNV	MB21D2:NM_178496:exon2:c.G1221A:p.P407P	exonic	ENSG00000180611	NA	synonymous SNV	ENSG00000180611:ENST00000392452:exon2:c.G1221A:p.P407P	NA	NA	3q29	Score=800;Name=V$HEN1_01	NA	NA	Score=100;Name=1691991.0_0_+_100	rs3732388	0.06	0.06	0.037	0.067492	0.0189	0.1647	0.0937	0.0038	0.0849	0.01	0.14	0.08	0.01	0.0462	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.352482	NA	NA	0.021395	0.013618	NA	0.022	NA	7.5801716
894	16	8729124	8729124	G	A	exonic	METTL22	NA	nonsynonymous SNV	METTL22:NM_024109:exon5:c.G655A:p.A219T	exonic	ENSG00000067365	NA	nonsynonymous SNV	ENSG00000067365:ENST00000572956:exon1:c.G43A:p.A15T,ENSG00000067365:ENST00000163678:exon4:c.G614A:p.R205H,ENSG00000067365:ENST00000381920:exon5:c.G655A:p.A219T,ENSG00000067365:ENST00000561758:exon6:c.G487A:p.A163T	NA	NA	16p13.2	NA	NA	NA	NA	rs2302607	0.21	0.21	0.184	0.1873	0.2694	0.3552	0.1643	0.0159	0.1779	0.24	0.33	0.18	0.02	0.2291	0.33	0.95	T	0.012	B	0.019	B	0.052	N	0.984	P	-0.165	N	3.33	T	-0.957	T	0.000	T	0.101	2.331	13.75	-0.687	-0.119	1.572	8.930	2.330758	2.330758	0	0.255362	0.058881	NA	0.138	NA	7.5794714
894	16	84870	84870	C	G	intergenic	DDX11L10,POLR3K	dist=20780;dist=12109	NA	NA	ncRNA_exonic	ENSG00000226942,ENSG00000260803	NA	NA	NA	Score=393;Name=lod=53	NA	16p13.3	Score=783;Name=V$COMP1_01	Name=EBF1_(C-8),EBF	Name=10	NA	rs2541688	0.27	0.27	0.26	0.252995	0.4215	0.2212	0.2767	0.0946	0.3098	0.43	0.18	0.3	0.12	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.550727	NA	NA	NA	NA	NA	0.275	NA	7.5785
894	1	26786627	26786627	G	A	exonic	DHDDS	NA	nonsynonymous SNV	DHDDS:NM_001243564:exon7:c.G655A:p.V219M,DHDDS:NM_001243565:exon7:c.G640A:p.V214M,DHDDS:NM_024887:exon8:c.G757A:p.V253M,DHDDS:NM_205861:exon8:c.G757A:p.V253M	exonic	ENSG00000117682	NA	nonsynonymous SNV	ENSG00000117682:ENST00000430232:exon6:c.G640A:p.V214M,ENSG00000117682:ENST00000525682:exon7:c.G655A:p.V219M,ENSG00000117682:ENST00000526219:exon7:c.G640A:p.V214M,ENSG00000117682:ENST00000236342:exon8:c.G757A:p.V253M,ENSG00000117682:ENST00000360009:exon8:c.G757A:p.V253M	NA	NA	1p36.11	NA	NA	Name=2	NA	rs3816539	0.42	0.42	0.442	0.455272	0.2346	0.7093	0.3069	0.4811	0.4908	0.24	0.74	0.28	0.43	0.3133	0.74	0.06	T	0.002	B	0.006	B	0.143	N	1.000	P	1.1	L	0.94	T	-0.970	T	0.000	T	0.244	1.521	11.04	-1.42	-0.176	0.741	12.092	1.520802	1.520802	0.11	0.207093	0.444394	ID=COSM146454;OCCURENCE=1(stomach),1(meninges)	0.428	NA	7.5783404
894	18	3188976	3188976	A	G	exonic	MYOM1	NA	nonsynonymous SNV	MYOM1:NM_003803:exon4:c.T541C:p.S181P,MYOM1:NM_019856:exon4:c.T541C:p.S181P	exonic	ENSG00000101605	NA	nonsynonymous SNV	ENSG00000101605:ENST00000261606:exon4:c.T541C:p.S181P,ENSG00000101605:ENST00000356443:exon4:c.T541C:p.S181P,ENSG00000101605:ENST00000400569:exon4:c.T541C:p.S181P	NA	NA	18p11.31	NA	NA	NA	NA	rs1962519	0.46	0.46	0.434	0.443291	0.4026	0.8363	0.402	0.1641	0.4867	0.41	0.83	0.38	0.17	0.4374	0.83	0.32	T	0.978	D	0.719	P	.	.	1.000	P	0	N	0.74	T	-0.993	T	0.000	T	0.169	1.905	12.33	1.27	0.370	-0.165	7.638	1.904802	1.904802	NA	0.415309	0.186843	NA	0.362	NA	7.5780244
894	4	3117168	3117168	C	G	exonic	HTT	NA	synonymous SNV	HTT:NM_002111:exon7:c.C885G:p.L295L	exonic	ENSG00000197386	NA	synonymous SNV	ENSG00000197386:ENST00000355072:exon7:c.C885G:p.L295L	Score=422;Name=lod=69	NA	4p16.3	Score=849;Name=V$GR_Q6	NA	NA	NA	rs1936032	0.04	0.04	0.037	0.0371406	0.0278	NA	0.0346	0.1006	0.001	0.03	NA	0.04	0.11	0.0295	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.856303	NA	NA	0.031763	0.092675	NA	0.036	NA	7.5776036
894	6	132211534	132211534	A	G	exonic	ENPP1	NA	synonymous SNV	ENPP1:NM_006208:exon25:c.A2661G:p.A887A	exonic	ENSG00000197594	NA	synonymous SNV	ENSG00000197594:ENST00000360971:exon25:c.A2661G:p.A887A	Score=598;Name=lod=358	NA	6q23.2	NA	NA	Name=10	NA	rs1804025	0.08	0.08	0.095	0.0790735	0.0318	NA	0.0331	0.2368	0.0286	0.03	NA	0.03	0.27	0.0387	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.598729	1.598729	NA	0.018837	0.206083	NA	0.029	NA	7.5773296
894	21	43258138	43258138	C	T	exonic	PRDM15	NA	synonymous SNV	PRDM15:NM_001040424:exon8:c.G1017A:p.P339P,PRDM15:NM_022115:exon15:c.G2004A:p.P668P	exonic	ENSG00000141956	NA	synonymous SNV	ENSG00000141956:ENST00000447207:exon7:c.G906A:p.P302P,ENSG00000141956:ENST00000398548:exon8:c.G1017A:p.P339P,ENSG00000141956:ENST00000422911:exon8:c.G1017A:p.P339P,ENSG00000141956:ENST00000441787:exon8:c.G906A:p.P302P,ENSG00000141956:ENST00000447016:exon8:c.G906A:p.P302P,ENSG00000141956:ENST00000449395:exon8:c.G1017A:p.P339P,ENSG00000141956:ENST00000538201:exon8:c.G906A:p.P302P,ENSG00000141956:ENST00000269844:exon15:c.G2004A:p.P668P,ENSG00000141956:ENST00000433067:exon15:c.G2004A:p.P668P	NA	NA	21q22.3	NA	Name=EBF	Name=8	NA	rs76107411	0.03	0.03	0.032	0.0325479	0.0258	0.001	0.0115	0.0915	0.0072	0.03	0.0017	0.02	0.08	0.0311	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.948733	NA	NA	0.033372	0.066954	NA	0.029	NA	7.5763946
895	19	38959680	38959680	C	T	exonic	RYR1	NA	synonymous SNV	RYR1:NM_000540:exon26:c.C3456T:p.I1152I,RYR1:NM_001042723:exon26:c.C3456T:p.I1152I	exonic	ENSG00000196218	NA	synonymous SNV	ENSG00000196218:ENST00000355481:exon26:c.C3456T:p.I1152I,ENSG00000196218:ENST00000359596:exon26:c.C3456T:p.I1152I,ENSG00000196218:ENST00000360985:exon26:c.C3456T:p.I1152I	Score=485;Name=lod=125	NA	19q13.2	Score=913;Name=V$CDPCR3HD_01	NA	NA	NA	rs11083462	0.39	0.39	0.372	0.449281	0.3419	0.4683	0.3357	0.4826	0.5757	0.34	0.46	0.33	0.44	0.3956	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.385871	1.385871	NA	0.354419	0.438493	ID=COSM148605;OCCURENCE=1(stomach)	0.442	CLINSIG=non-pathogenic|untested;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|not;CLNACC=RCV000079140.1|RCV000119611.1;CLNDSDB=.|.;CLNDSDBID=.|.	7.5747476
895	8	135649848	135649848	G	A	exonic	ZFAT	NA	nonsynonymous SNV	ZFAT:NM_001167583:exon3:c.C268T:p.P90S,ZFAT:NM_001174157:exon3:c.C304T:p.P102S,ZFAT:NM_001174158:exon3:c.C268T:p.P90S,ZFAT:NM_020863:exon3:c.C304T:p.P102S,ZFAT:NM_001029939:exon4:c.C268T:p.P90S	exonic	ENSG00000066827	NA	nonsynonymous SNV	ENSG00000066827:ENST00000522257:exon2:c.C118T:p.P40S,ENSG00000066827:ENST00000377838:exon3:c.C304T:p.P102S,ENSG00000066827:ENST00000429442:exon3:c.C268T:p.P90S,ENSG00000066827:ENST00000518191:exon3:c.C268T:p.P90S,ENSG00000066827:ENST00000520214:exon3:c.C268T:p.P90S,ENSG00000066827:ENST00000520356:exon3:c.C268T:p.P90S,ENSG00000066827:ENST00000523243:exon3:c.C304T:p.P102S,ENSG00000066827:ENST00000523399:exon3:c.C304T:p.P102S,ENSG00000066827:ENST00000520727:exon4:c.C268T:p.P90S	NA	NA	8q24.22	NA	NA	NA	NA	rs12541381	0.24	0.24	0.213	0.216254	0.2634	0.3075	0.2219	0.0628	0.2771	0.26	0.33	0.26	0.07	0.2497	0.33	0.09	T	0.02	B	0.018	B	0.098	N	1.000	P	0.55	N	3.12	T	-0.970	T	0.000	T	0.164	-1.84	0.009	1.06	-0.088	2.410	5.636	-1.839731	NA	0.79	0.247135	0.100827	NA	0.13	NA	7.5730984
895	6	123687288	123687288	A	C	exonic	TRDN	NA	nonsynonymous SNV	TRDN:NM_001251987:exon20:c.T1316G:p.I439S,TRDN:NM_006073:exon20:c.T1313G:p.I438S	exonic	ENSG00000186439	NA	nonsynonymous SNV	ENSG00000186439:ENST00000334268:exon20:c.T1313G:p.I438S,ENSG00000186439:ENST00000398178:exon20:c.T1313G:p.I438S	Score=385;Name=lod=49	NA	6q22.31	NA	NA	NA	NA	rs2873479	0.95	0.95	0.947	0.939297	0.9215	0.9196	0.951	0.9644	0.9356	0.91	0.99	0.94	0.98	0.924	0.99	0.7	T	0.0	B	0.0	B	0.044	N	0.000	P	0	N	2.29	T	-0.929	T	0.007	T	0.027	-0.328	2.446	4.68	0.914	2.341	7.740	-0.327524	NA	0.34	0.915624	0.94779	NA	0.957	NA	7.5722094
895	16	27840271	27840271	C	T	exonic	GSG1L	NA	synonymous SNV	GSG1L:NM_144675:exon4:c.G204A:p.A68A,GSG1L:NM_001109763:exon5:c.G669A:p.A223A	exonic	ENSG00000169181	NA	synonymous SNV	ENSG00000169181:ENST00000569166:exon3:c.G204A:p.A68A,ENSG00000169181:ENST00000380897:exon4:c.G204A:p.A68A,ENSG00000169181:ENST00000395724:exon4:c.G516A:p.A172A,ENSG00000169181:ENST00000380898:exon5:c.G204A:p.A68A,ENSG00000169181:ENST00000447459:exon5:c.G669A:p.A223A	Score=704;Name=lod=965	NA	16p12.1	Score=698;Name=V$BRACH_01	NA	NA	NA	rs117918036	0.02	0.02	0.016	0.0105831	0.0348	0.001	0.0173	NA	0.0051	0.04	NA	0.01	0.0041	0.0219	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.374435	1.374435	NA	0.037791	0.0066	NA	NA	NA	7.5721756
895	1	235918870	235918870	T	G	exonic	LYST	NA	synonymous SNV	LYST:NM_000081:exon25:c.A7137C:p.L2379L	exonic	ENSG00000143669	NA	synonymous SNV	ENSG00000143669:ENST00000389793:exon25:c.A7137C:p.L2379L,ENSG00000143669:ENST00000389794:exon25:c.A7137C:p.L2379L	Score=686;Name=lod=817	NA	1q42.3	Score=910;Name=V$NFY_C	NA	NA	NA	rs61738992	0.02	0.02	0.011	0.0209665	0.0298	NA	0.085	0.0015	0.0143	0.03	NA	0.07	NA	0.032	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.023514	NA	NA	0.034302	0.007036	NA	0.007	NA	7.5705646
895	12	49444545	49444545	G	A	exonic	MLL2	NA	synonymous SNV	MLL2:NM_003482:exon11:c.C2826T:p.I942I	exonic	ENSG00000167548	NA	synonymous SNV	ENSG00000167548:ENST00000301067:exon11:c.C2826T:p.I942I	Score=437;Name=lod=80	NA	12q13.12	Score=797;Name=V$HEN1_02	NA	NA	NA	rs2241726	0.37	0.37	0.364	0.403554	0.3479	0.4306	0.2911	0.4297	0.4775	0.35	0.39	0.3	0.41	0.3796	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.539446	NA	NA	0.37033	0.417617	ID=COSM147497;OCCURENCE=1(stomach)	0.377	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000080169.1;CLNDSDB=.;CLNDSDBID=.	7.5688366
895	5	131008194	131008194	T	C	exonic	FNIP1	NA	nonsynonymous SNV	FNIP1:NM_001008738:exon13:c.A1859G:p.Q620R,FNIP1:NM_133372:exon14:c.A1943G:p.Q648R	exonic	ENSG00000217128	NA	nonsynonymous SNV	ENSG00000217128:ENST00000307954:exon13:c.A1808G:p.Q603R,ENSG00000217128:ENST00000307968:exon13:c.A1859G:p.Q620R,ENSG00000217128:ENST00000510461:exon14:c.A1943G:p.Q648R	NA	NA	5q31.1	NA	Name=FOXA1_(C-20),ERalpha_a,GATA3_(SC-268),p300	Name=90	NA	rs26008	0.88	0.88	0.895	0.867013	0.9364	0.7946	0.8112	0.8994	0.8661	0.93	0.81	0.88	0.91	0.8901	0.94	0.25	T	0.0	B	0.0	B	.	.	0.997	P	0	N	2.62	T	-1.005	T	0.000	T	0.022	-2.147	0.005	-1.92	-1.133	-0.115	14.746	-2.146734	NA	0.77	0.938023	0.901271	NA	0.768	NA	7.5688104
895	19	3754020	3754020	G	C	exonic	APBA3	NA	synonymous SNV	APBA3:NM_004886:exon5:c.C846G:p.S282S	exonic	ENSG00000011132	NA	synonymous SNV	ENSG00000011132:ENST00000316757:exon5:c.C846G:p.S282S	Score=425;Name=lod=71	NA	19p13.3	Score=894;Name=V$NFE2_01	NA	NA	NA	rs61731066	0.02	0.02	0.027	0.0171725	0.0308	NA	0.036	0.0091	0.0184	0.03	NA	0.02	0.01	0.034	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.117868	NA	NA	0.033256	0.009305	NA	0.036	NA	7.5686106
895	20	62194238	62194238	C	T	exonic	HELZ2	NA	synonymous SNV	HELZ2:NM_033405:exon3:c.G4230A:p.P1410P,HELZ2:NM_001037335:exon9:c.G5937A:p.P1979P	exonic	ENSG00000130589	NA	synonymous SNV	ENSG00000130589:ENST00000427522:exon3:c.G4230A:p.P1410P,ENSG00000130589:ENST00000467148:exon8:c.G5937A:p.P1979P	NA	NA	20q13.33	NA	Name=EBF1_(C-8),EBF,PAX5-N19,PAX5-C20,TCF12	Name=5	NA	rs34996572	0.01	0.01	0.007	0.0141773	0.0408	0.001	0.0303	0.0008	0.0072	0.03	NA	0.03	NA	0.0292	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.500185	NA	NA	0.028949	0.005356	NA	0.029	NA	7.5677176
895	4	89319296	89319296	T	C	exonic	HERC6	NA	nonsynonymous SNV	HERC6:NM_001165136:exon8:c.T1027C:p.F343L,HERC6:NM_017912:exon8:c.T1027C:p.F343L	exonic	ENSG00000138642	NA	nonsynonymous SNV	ENSG00000138642:ENST00000264346:exon8:c.T1027C:p.F343L,ENSG00000138642:ENST00000380265:exon8:c.T1027C:p.F343L	NA	NA	4q22.1	NA	NA	NA	NA	rs17014118	0.5	0.5	0.517	0.555112	0.173	0.6944	0.4438	0.826	0.5174	0.16	0.72	0.41	0.81	0.4465	0.81	0.93	T	0.0	B	0.0	B	0.141	N	1.000	P	-1.7	N	-1.02	T	-1.044	T	0.000	T	0.037	-0.714	0.927	2.65	0.560	0.319	5.404	-0.714008	NA	1	0.146755	0.715584	NA	0.413	NA	7.5670784
895	11	59480951	59480951	T	C	exonic	OR10V1	NA	nonsynonymous SNV	OR10V1:NM_001005324:exon1:c.A368G:p.Q123R	exonic	ENSG00000172289	NA	nonsynonymous SNV	ENSG00000172289:ENST00000307552:exon1:c.A368G:p.Q123R	Score=439;Name=lod=81	NA	11q12.1	NA	NA	NA	NA	rs499033	0.96	0.96	0.966	0.973842	0.9165	1	0.9582	0.9977	0.9847	0.92	1	0.96	0.99	0.9376	1	1	T	0.0	B	0.0	B	0.006	N	0.000	P	-2.995	N	3.52	T	-1.012	T	0.000	T	0.055	-0.489	1.754	3.43	0.588	3.049	7.354	-0.488522	NA	1	0.912689	0.982508	NA	0.877	NA	7.5665444
895	15	62259637	62259637	C	T	exonic	VPS13C	NA	nonsynonymous SNV	VPS13C:NM_017684:exon27:c.G2792A:p.R931K,VPS13C:NM_018080:exon27:c.G2792A:p.R931K,VPS13C:NM_001018088:exon29:c.G2921A:p.R974K,VPS13C:NM_020821:exon29:c.G2921A:p.R974K	exonic	ENSG00000129003	NA	nonsynonymous SNV	ENSG00000129003:ENST00000249837:exon27:c.G2792A:p.R931K,ENSG00000129003:ENST00000395898:exon27:c.G2792A:p.R931K,ENSG00000129003:ENST00000261517:exon29:c.G2921A:p.R974K,ENSG00000129003:ENST00000395896:exon29:c.G2921A:p.R974K	Score=371;Name=lod=43	NA	15q22.2	NA	NA	NA	NA	rs3784634	0.72	0.72	0.765	0.755391	0.5636	0.8542	0.6052	0.9228	0.7311	0.55	0.85	0.59	0.91	0.6288	0.91	1	T	0.0	B	0.0	B	0.019	N	1.000	P	-1.5	N	2.33	T	-0.985	T	0.000	T	0.046	-0.448	1.921	1.62	0.084	1.921	9.755	-0.448323	NA	1	0.574755	0.849159	NA	0.746	NA	7.5661784
895	19	53015384	53015384	A	G	exonic	ZNF578	NA	nonsynonymous SNV	ZNF578:NM_001099694:exon6:c.A1750G:p.I584V	exonic	ENSG00000258405	NA	nonsynonymous SNV	ENSG00000258405:ENST00000421239:exon6:c.A1750G:p.I584V	NA	NA	19q13.41	NA	NA	NA	NA	rs4802965	0.32	0.32	0.319	0.339058	0.2425	0.5198	0.3991	0.2564	0.3211	0.23	0.5	0.33	0.23	0.2905	0.5	.	.	0.0	B	0.0	B	.	.	1.000	P	0.28	N	.	.	-0.902	T	0.000	T	0.008	-2.427	0.003	-2.97	-0.878	0.000	1.687	-2.427475	NA	NA	0.234357	0.241928	NA	0.232	NA	7.5659764
895	21	36080290	36080290	C	T	exonic	CLIC6	NA	synonymous SNV	CLIC6:NM_053277:exon3:c.C1533T:p.F511F	exonic	ENSG00000159212	NA	synonymous SNV	ENSG00000159212:ENST00000349499:exon3:c.C1533T:p.F511F,ENSG00000159212:ENST00000360731:exon4:c.C1587T:p.F529F	Score=471;Name=lod=109	NA	21q22.12	Score=927;Name=V$TCF11_01	NA	Name=10	NA	rs6517254	0.36	0.36	0.372	0.370008	0.3708	0.1944	0.281	0.6483	0.2372	0.37	0.16	0.29	0.62	0.3423	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.230434	NA	NA	0.38814	0.605538	NA	0.478	NA	7.5654266
896	3	196054439	196054439	T	G	exonic	TM4SF19	NA	nonsynonymous SNV	TM4SF19:NM_001204897:exon2:c.A23C:p.Q8P,TM4SF19:NM_001204898:exon2:c.A23C:p.Q8P,TM4SF19:NM_138461:exon2:c.A23C:p.Q8P	exonic	ENSG00000145107	NA	nonsynonymous SNV	ENSG00000145107:ENST00000273695:exon2:c.A23C:p.Q8P,ENSG00000145107:ENST00000442633:exon2:c.A23C:p.Q8P,ENSG00000145107:ENST00000446879:exon2:c.A23C:p.Q8P,ENSG00000145107:ENST00000454715:exon2:c.A23C:p.Q8P	NA	NA	3q29	NA	NA	Name=19	NA	rs6785339	0.64	0.64	0.639	0.630791	0.5726	0.871	0.6009	0.4402	0.7219	0.59	0.88	0.61	0.48	0.6194	0.88	0.15	T	0.0	B	0.0	B	0.969	N	1.000	P	0	N	1.88	T	-1.019	T	0.000	T	0.066	1.282	10.19	3.1	0.407	0.670	3.407	1.28216	1.28216	0.2	0.576512	0.479346	ID=COSM1162699;OCCURENCE=1(pancreas)	0.58	NA	7.5648214
896	8	55541450	55541450	G	A	exonic	RP1	NA	nonsynonymous SNV	RP1:NM_006269:exon4:c.G5008A:p.A1670T	exonic	ENSG00000104237	NA	nonsynonymous SNV	ENSG00000104237:ENST00000220676:exon4:c.G5008A:p.A1670T	NA	NA	8q12.1	NA	NA	NA	NA	rs446227	0.28	0.28	0.269	0.248203	0.2614	0.4415	0.2824	0.0772	0.2423	0.25	0.44	0.26	0.13	0.2532	0.44	0.48	T	0.011	B	0.003	B	0.604	N	1.000	P	0.14	N	2.15	T	-0.906	T	0.000	T	0.029	-0.083	3.593	-0.331	-0.379	0.010	1.855	-0.083196	NA	0.92	0.255698	0.107581	NA	0.167	CLINSIG=non-pathogenic|probable-non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000081371.1|RCV000132660.1;CLNDSDB=.|.;CLNDSDBID=.|.	7.5630354
896	7	143097100	143097100	A	G	exonic	EPHA1	NA	nonsynonymous SNV	EPHA1:NM_005232:exon4:c.T479C:p.V160A	exonic	ENSG00000146904	NA	nonsynonymous SNV	ENSG00000146904:ENST00000275815:exon4:c.T479C:p.V160A	NA	NA	7q34	Score=887;Name=V$HAND1E47_01	NA	NA	NA	rs4725617	0.93	0.93	0.913	0.94349	0.9195	0.9921	0.9726	0.8722	0.9939	0.91	0.99	0.97	0.86	0.9284	0.99	0.23	T	0.0	B	0.0	B	0.001	N	1.000	P	-0.975	N	3.96	T	-0.982	T	0.000	T	0.12	0.2	5.079	3.88	0.577	0.994	7.094	0.200225	NA	0.29	0.922674	0.865411	NA	0.899	NA	7.5627594
896	22	41195082	41195082	G	A	exonic	SLC25A17	NA	synonymous SNV	SLC25A17:NM_006358:exon2:c.C60T:p.S20S	exonic	ENSG00000100372	NA	synonymous SNV	ENSG00000100372:ENST00000263255:exon2:c.C60T:p.S20S,ENSG00000100372:ENST00000412879:exon2:c.C60T:p.S20S,ENSG00000100372:ENST00000420970:exon2:c.C60T:p.S20S,ENSG00000100372:ENST00000426396:exon2:c.C60T:p.S20S,ENSG00000100372:ENST00000434193:exon2:c.C60T:p.S20S,ENSG00000100372:ENST00000435456:exon2:c.C60T:p.S20S,ENSG00000100372:ENST00000443810:exon2:c.C60T:p.S20S,ENSG00000100372:ENST00000449676:exon2:c.C60T:p.S20S,ENSG00000100372:ENST00000458600:exon2:c.C60T:p.S20S,ENSG00000100372:ENST00000542412:exon2:c.C60T:p.S20S,ENSG00000100372:ENST00000434185:exon3:c.C9T:p.S3S	NA	NA	22q13.2	Score=816;Name=V$PAX3_01	NA	Name=3	NA	rs117487309	0.06	0.06	0.016	0.0559105	0.0199	0.004	0.3602	0.0038	0.001	0.02	0.01	0.3	0.01	0.0645	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.748625	NA	NA	0.020116	0.009759	NA	0.029	NA	7.5621506
896	8	52233408	52233408	C	T	exonic	PXDNL	NA	nonsynonymous SNV	PXDNL:NM_144651:exon22:c.G4196A:p.R1399K	exonic	ENSG00000147485	NA	nonsynonymous SNV	ENSG00000147485:ENST00000356297:exon22:c.G4196A:p.R1399K	Score=259;Name=lod=15	NA	8q11.22	NA	NA	NA	NA	rs7827446	0.31	0.31	0.318	0.321286	0.2396	0.1429	0.2291	0.6346	0.2311	0.24	0.15	0.26	0.63	0.27	0.63	1	T	0.0	B	0.001	B	.	.	0.003	P	-0.67	N	-0.08	T	-0.943	T	0.000	T	0.15	-0.595	1.339	0.646	-0.466	-0.062	4.173	-0.59468	NA	1	0.262014	0.540021	ID=COSM1457422;OCCURENCE=1(large_intestine)	0.326	NA	7.5617194
896	2	220037756	220037756	A	G	exonic	CNPPD1	NA	nonsynonymous SNV	CNPPD1:NM_015680:exon8:c.T785C:p.I262T	exonic	ENSG00000115649	NA	nonsynonymous SNV	ENSG00000115649:ENST00000360507:exon8:c.T785C:p.I262T,ENSG00000115649:ENST00000409789:exon9:c.T785C:p.I262T,ENSG00000115649:ENST00000453038:exon9:c.T785C:p.I262T	NA	NA	2q35	NA	Name=GATA-1	NA	NA	rs1043160	0.43	0.43	0.407	0.410343	0.6223	0.2302	0.4063	0.2655	0.5767	0.64	0.26	0.45	0.3	0.5406	0.64	0.47	T	0.0	B	0.0	B	0.063	N	1.000	P	-0.345	N	2.47	T	-0.977	T	0.000	T	0.202	-1.737	0.011	2.24	0.345	0.652	11.991	-1.736839	NA	0.37	0.609328	0.31094	NA	0.5	NA	7.5611054
896	2	170403030	170403030	T	C	exonic	FASTKD1	NA	nonsynonymous SNV	FASTKD1:NM_024622:exon8:c.A1399G:p.M467V	exonic	ENSG00000138399	NA	nonsynonymous SNV	ENSG00000138399:ENST00000453153:exon8:c.A1399G:p.M467V,ENSG00000138399:ENST00000453929:exon8:c.A1399G:p.M467V	NA	NA	2q31.1	NA	NA	NA	NA	rs2253680	0.57	0.57	0.527	0.542931	0.6163	0.5089	0.6744	0.4894	0.4816	0.63	0.48	0.64	0.52	0.5731	0.64	0.85	T	0.0	B	0.002	B	0.803	N	1.000	P	0	N	2.3	T	-0.945	T	0.000	T	0.018	-2.501	0.003	-9.13	-1.957	-0.132	3.380	-2.500765	NA	1	0.584651	0.502724	NA	0.522	NA	7.5592824
896	11	50003191	50003191	C	A	exonic	OR4C12	NA	nonsynonymous SNV	OR4C12:NM_001005270:exon1:c.G847T:p.V283L	exonic	ENSG00000221954	NA	nonsynonymous SNV	ENSG00000221954:ENST00000335238:exon1:c.G847T:p.V283L	Score=369;Name=lod=42	NA	11p11.12	NA	NA	NA	NA	rs4598671	0.51	0.51	0.478	0.492212	0.5924	0.5565	0.634	0.2912	0.4939	0.59	0.55	0.65	0.21	0.5805	0.65	1	T	0.0	B	0.0	B	0.006	N	1.000	P	-0.535	N	1.39	T	-0.925	T	0.000	T	0.067	-1.678	0.012	2.98	0.361	-0.344	3.490	-1.678493	NA	1	0.601606	0.348478	NA	0.5	NA	7.5588274
896	11	116729196	116729196	T	C	exonic	SIK3	NA	synonymous SNV	SIK3:NM_025164:exon20:c.A2667G:p.L889L	exonic	ENSG00000160584	NA	synonymous SNV	ENSG00000160584:ENST00000375288:exon19:c.A672G:p.L224L,ENSG00000160584:ENST00000292055:exon20:c.A2667G:p.L889L,ENSG00000160584:ENST00000375300:exon20:c.A2841G:p.L947L,ENSG00000160584:ENST00000446921:exon20:c.A2661G:p.L887L,ENSG00000160584:ENST00000542607:exon20:c.A2487G:p.L829L,ENSG00000160584:ENST00000434315:exon21:c.A2184G:p.L728L	Score=560;Name=lod=251	NA	11q23.3	NA	NA	NA	NA	rs541586	0.16	0.16	0.163	0.18131	0.0219	0.0794	0.0879	0.534	0.0399	0.02	0.07	0.09	0.51	0.0672	0.51	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.899	T	0.000	T	.	0.985	9.021	-1.17	0.068	0.310	7.523	0.984779	NA	NA	0.021648	0.463426	NA	0.08	NA	7.5559186
896	18	72913920	72913920	C	T	exonic	ZADH2	NA	synonymous SNV	ZADH2:NM_175907:exon2:c.G585A:p.K195K	exonic	ENSG00000180011	NA	synonymous SNV	ENSG00000180011:ENST00000322342:exon2:c.G585A:p.K195K,ENSG00000180011:ENST00000537114:exon2:c.G216A:p.K72K,ENSG00000180011:ENST00000581620:exon2:c.G216A:p.K72K,ENSG00000180011:ENST00000582437:exon2:c.G216A:p.K72K	Score=479;Name=lod=118	NA	18q22.3	NA	NA	Name=18	NA	rs61910717	0.02	0.02	0.014	0.0253594	0.0358	NA	0.0202	0.003	0.0746	0.04	NA	0.03	0.01	0.0383	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.62995	NA	NA	0.03686	0.008625	NA	0.014	NA	7.5557066
897	19	58928786	58928786	A	G	exonic	ZNF584	NA	nonsynonymous SNV	ZNF584:NM_173548:exon4:c.A901G:p.T301A	exonic	ENSG00000171574	NA	nonsynonymous SNV	ENSG00000171574:ENST00000306910:exon4:c.A901G:p.T301A,ENSG00000171574:ENST00000593920:exon4:c.A766G:p.T256A	NA	NA	19q13.43	NA	NA	NA	NA	rs7257872	0.29	0.29	0.303	0.290935	0.2465	0.2708	0.1787	0.4592	0.2096	0.26	0.26	0.21	0.45	0.2603	0.45	0.16	T	0.001	B	0.005	B	.	.	1.000	P	1.04	L	3.21	T	-0.933	T	0.000	T	0.031	1.211	9.916	0.242	-0.127	-4.685	1.808	1.210741	NA	0.27	0.271977	0.450522	NA	0.355	NA	7.5545564
897	12	88440676	88440676	G	C	exonic	C12orf29	NA	nonsynonymous SNV	C12orf29:NM_001009894:exon6:c.G712C:p.V238L	exonic	ENSG00000133641	NA	nonsynonymous SNV	ENSG00000133641:ENST00000356891:exon6:c.G712C:p.V238L	NA	NA	12q21.32	NA	NA	NA	NA	rs9262	0.51	0.51	0.453	0.510583	0.6083	0.7361	0.562	0.1528	0.6247	0.59	0.71	0.55	0.12	0.5827	0.71	0.54	T	0.0	B	0.001	B	0.140	N	1.000	P	-0.69	N	1.64	T	-1.000	T	0.000	T	0.033	0.901	8.664	-4.2	-0.739	-1.166	9.202	0.901337	NA	0.76	0.588837	0.235588	NA	0.399	NA	7.5534964
897	4	37962186	37962186	G	C	exonic	PTTG2	NA	nonsynonymous SNV	PTTG2:NM_006607:exon1:c.G131C:p.R44P	exonic	ENSG00000250254	NA	nonsynonymous SNV	ENSG00000250254:ENST00000504686:exon1:c.G131C:p.R44P	NA	NA	4p14	NA	NA	NA	NA	rs6811863	0.73	0.73	0.709	0.729832	0.5746	0.9583	0.7017	0.6967	0.7188	0.58	0.97	0.69	0.7	0.6413	0.97	1	T	0.0	B	0.0	B	.	.	1.000	P	-2.545	N	1.17	T	-0.934	T	0.000	T	0.046	-0.617	1.255	-4.04	-1.494	-0.042	1.388	-0.617482	NA	NA	0.564535	0.703998	NA	0.645	NA	7.5528984
897	12	4735968	4735968	A	C	exonic	AKAP3	NA	synonymous SNV	AKAP3:NM_006422:exon4:c.T2100G:p.S700S	exonic	ENSG00000111254	NA	synonymous SNV	ENSG00000111254:ENST00000228850:exon4:c.T2100G:p.S700S,ENSG00000111254:ENST00000545990:exon5:c.T2100G:p.S700S	Score=358;Name=lod=38	NA	12p13.32	NA	NA	Name=8	NA	rs2041292	NA	NA	NA	0.158347	0.1143	0.1647	0.1225	0.1248	0.2679	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.104813	NA	NA	NA	NA	NA	NA	NA	7.5523666
897	11	125479363	125479363	G	A	exonic	STT3A	NA	synonymous SNV	STT3A:NM_152713:exon10:c.G996A:p.S332S	exonic	ENSG00000134910	NA	synonymous SNV	ENSG00000134910:ENST00000531491:exon9:c.G720A:p.S240S,ENSG00000134910:ENST00000392708:exon10:c.G996A:p.S332S,ENSG00000134910:ENST00000529196:exon11:c.G996A:p.S332S	Score=608;Name=lod=393	NA	11q24.2	NA	NA	NA	NA	rs2241502	0.41	0.41	0.424	0.419329	0.3787	0.4335	0.2752	0.5227	0.409	0.37	0.38	0.31	0.57	0.3694	0.57	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.911	T	0.000	T	.	3.962	20.3	-4.43	-0.923	-0.694	0.941	3.961505	3.961505	NA	0.367178	0.50159	NA	0.399	NA	7.5513886
897	1	32279629	32279629	G	A	exonic	SPOCD1	NA	nonsynonymous SNV	SPOCD1:NM_144569:exon2:c.C1306T:p.R436W	exonic	ENSG00000134668	NA	nonsynonymous SNV	ENSG00000134668:ENST00000533231:exon1:c.C1306T:p.R436W,ENSG00000134668:ENST00000360482:exon2:c.C1306T:p.R436W,ENSG00000134668:ENST00000373648:exon2:c.C1306T:p.R436W	NA	NA	1p35.2	NA	NA	NA	NA	rs6669563	0.4	0.4	0.352	0.346246	0.4374	0.4226	0.4957	0.1876	0.2822	0.45	0.45	0.44	0.22	0.4068	0.45	0	D	0.825	P	0.237	B	.	.	1.000	P	0	N	1.84	T	-0.929	T	0.000	T	0.123	1.255	10.09	0.152	0.044	0.049	3.809	1.254901	1.254901	0	0.437791	0.224694	ID=COSM146457;OCCURENCE=1(stomach),1(meninges)	0.304	NA	7.5513424
897	8	144941181	144941181	G	C	exonic	EPPK1	NA	nonsynonymous SNV	EPPK1:NM_031308:exon1:c.C6241G:p.L2081V	exonic	ENSG00000227184	NA	nonsynonymous SNV	ENSG00000227184:ENST00000525985:exon2:c.C6241G:p.L2081V	NA	NA	8q24.3	NA	NA	NA	NA	rs7839934	0.26	0.26	0.249	0.285942	0.2575	0.2669	0.2997	0.2254	0.407	0.26	0.26	0.29	0.24	0.2693	0.29	0.53	T	0.0	B	0.0	B	.	.	1.000	P	.	.	-0.37	T	-1.037	T	0.000	T	0.029	-0.107	3.474	-1.77	-0.861	-2.297	5.516	-0.107219	NA	NA	0.255451	0.222841	NA	0.159	NA	7.5510824
897	13	111176519	111176519	G	T	exonic	RAB20	NA	synonymous SNV	RAB20:NM_017817:exon2:c.C198A:p.G66G	exonic	ENSG00000139832	NA	synonymous SNV	ENSG00000139832:ENST00000267328:exon2:c.C198A:p.G66G	Score=581;Name=lod=307	NA	13q34	Score=789;Name=V$PAX5_01	NA	NA	Score=100;Name=679317_0_+_100	rs375814	0.38	0.38	0.362	0.380192	0.3827	0.2808	0.4539	0.4675	0.3098	0.37	0.29	0.44	0.46	0.3703	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.799649	NA	NA	0.363541	0.455969	ID=COSM1477060,COSM432120;OCCURENCE=1(breast)	0.493	NA	7.5501256
897	11	33083263	33083263	G	A	exonic	TCP11L1	NA	synonymous SNV	TCP11L1:NM_001145541:exon7:c.G963A:p.P321P,TCP11L1:NM_018393:exon7:c.G963A:p.P321P	exonic	ENSG00000176148	NA	synonymous SNV	ENSG00000176148:ENST00000324357:exon2:c.G300A:p.P100P,ENSG00000176148:ENST00000334274:exon7:c.G963A:p.P321P,ENSG00000176148:ENST00000432887:exon7:c.G963A:p.P321P,ENSG00000176148:ENST00000527661:exon7:c.G963A:p.P321P,ENSG00000176148:ENST00000531632:exon7:c.G963A:p.P321P	NA	NA	11p13	Score=756;Name=V$STAT3_01	Name=FOXA1_(SC-101058),BAF155,Pol2,NRSF,YY1_(C-20),AP-2gamma,EBF,JunD,Ini1,Pol2-4H8,c-Jun	NA	NA	rs61889262	0.02	0.02	0.017	0.014976	0.0457	NA	0.0274	0.0015	0.0082	0.04	NA	0.02	0.002	0.031	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.274365	NA	NA	0.039902	0.007947	NA	0.109	NA	7.5500646
897	14	20784431	20784431	G	A	exonic	CCNB1IP1	NA	synonymous SNV	CCNB1IP1:NM_182849:exon4:c.C252T:p.I84I,CCNB1IP1:NM_021178:exon5:c.C252T:p.I84I,CCNB1IP1:NM_182852:exon6:c.C252T:p.I84I	exonic	ENSG00000100814	NA	synonymous SNV	ENSG00000100814:ENST00000353689:exon4:c.C252T:p.I84I,ENSG00000100814:ENST00000358932:exon5:c.C252T:p.I84I,ENSG00000100814:ENST00000398160:exon5:c.C252T:p.I84I,ENSG00000100814:ENST00000398163:exon5:c.C252T:p.I84I,ENSG00000100814:ENST00000398169:exon5:c.C252T:p.I84I,ENSG00000100814:ENST00000437553:exon5:c.C252T:p.I84I,ENSG00000100814:ENST00000556854:exon5:c.C252T:p.I84I,ENSG00000100814:ENST00000557665:exon5:c.C252T:p.I84I	Score=541;Name=lod=211	NA	14q11.2	NA	Name=Pol2	NA	NA	rs17242578	0.09	0.09	0.087	0.118211	0.0249	0.1677	0.0922	0.1505	0.138	0.02	0.13	0.07	0.16	0.0652	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.472314	1.472314	NA	0.026512	0.123922	NA	0.058	NA	7.5500546
897	3	131102053	131102053	A	G	exonic	NUDT16	NA	synonymous SNV	NUDT16:NM_001171905:exon3:c.A318G:p.V106V,NUDT16:NM_152395:exon3:c.A456G:p.V152V	exonic	ENSG00000198585	NA	synonymous SNV	ENSG00000198585:ENST00000359850:exon3:c.A357G:p.V119V,ENSG00000198585:ENST00000521288:exon3:c.A456G:p.V152V,ENSG00000198585:ENST00000537561:exon3:c.A318G:p.V106V	Score=558;Name=lod=248	NA	3q22.1	Score=759;Name=V$PAX4_04	NA	NA	NA	rs11549806	0.08	0.08	0.068	0.071885	0.0318	0.1667	0.1297	0.0325	0.0276	0.03	0.18	0.1	0.03	0.0533	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.285825	1.285825	NA	0.031744	0.027916	NA	0.029	NA	7.5498226
897	11	2167618	2167618	A	G	ncRNA_exonic	IGF2-AS	NA	NA	NA	ncRNA_exonic	ENSG00000099869	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs1003484	0.64	0.64	0.627	0.598043	0.6978	0.504	0.7839	0.5809	0.4836	0.73	0.46	0.78	0.59	0.6848	0.78	0	D	0.0	B	0.0	B	.	.	1.000	P	.	.	.	.	-0.954	T	0.000	T	.	-0.843	0.568	-2.56	-3.153	-1.749	4.268	-0.842558	NA	1	0.734847	0.585894	NA	0.63	NA	7.5492196
897	12	71029680	71029680	A	G	exonic	PTPRB	NA	synonymous SNV	PTPRB:NM_001109754:exon2:c.T222C:p.S74S	exonic	ENSG00000127329	NA	synonymous SNV	ENSG00000127329:ENST00000334414:exon2:c.T222C:p.S74S,ENSG00000127329:ENST00000550358:exon2:c.T222C:p.S74S,ENSG00000127329:ENST00000551525:exon2:c.T219C:p.S73S	NA	NA	12q15	NA	Name=Pol2	Name=17	NA	rs74101511	0.03	0.03	0.024	0.0257588	0.0318	NA	0.0202	0.0439	0.0256	0.04	NA	0.02	0.06	0.0375	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.49377	NA	NA	0.048383	0.047666	NA	0.022	NA	7.5489836
897	19	41903220	41903220	G	A	exonic	EXOSC5	NA	nonsynonymous SNV	EXOSC5:NM_020158:exon1:c.C14T:p.T5M	exonic	ENSG00000077348	NA	nonsynonymous SNV	ENSG00000077348:ENST00000221233:exon1:c.C14T:p.T5M,ENSG00000077348:ENST00000593771:exon1:c.C14T:p.T5M,ENSG00000077348:ENST00000596905:exon1:c.C14T:p.T5M	NA	NA	19q13.2	NA	Name=E2F1,Pol2-4H8,HDAC2_(SC-6296),HA-E2F1,Sin3Ak-20,YY1,TBP,USF-1,HEY1,NFKB,CCNT2,c-Myc,E2F6,USF1_(SC-8983),YY1_(C-20),Pol2(phosphoS2),PU.1,ATF3,Mxi1_(bHLH),NRSF,Pol2,GABP,USF2,HMGN3,E2F4,ETS1,E2F6_(H-50),TAF1,CEBPB,ELF1_(SC-631),FOXA1_(SC-101058),Max	NA	NA	rs10853751	0.61	0.61	0.619	0.614417	0.5875	0.4315	0.4798	0.8555	0.6002	0.58	0.45	0.56	0.86	0.5954	0.86	0.41	T	0.0	B	0.0	B	0.514	N	1.000	P	0	N	1.49	T	-0.997	T	0.000	T	0.026	-0.783	0.722	2.61	0.204	-0.095	3.245	-0.783098	NA	NA	0.601628	0.810032	NA	0.688	NA	7.5488054
897	12	113386779	113386779	C	G	exonic	OAS3	NA	nonsynonymous SNV	OAS3:NM_006187:exon6:c.C1143G:p.S381R	exonic	ENSG00000111331	NA	nonsynonymous SNV	ENSG00000111331:ENST00000228928:exon6:c.C1143G:p.S381R	NA	NA	12q24.13	NA	NA	NA	NA	rs2285933	0.28	0.28	0.286	0.280551	0.2565	0.1577	0.379	0.4092	0.1881	0.27	0.18	0.32	0.39	0.2671	0.39	0.08	T	0.139	B	0.007	B	.	.	1.000	P	0.345	N	3.27	T	-0.910	T	0.000	T	0.317	-0.362	2.291	0.031	-0.002	-0.993	3.388	-0.362396	NA	0.01	0.261339	0.365792	ID=COSM1600011;OCCURENCE=1(central_nervous_system)	0.297	NA	7.5483944
897	6	160198395	160198395	G	A	exonic	ACAT2	NA	synonymous SNV	ACAT2:NM_005891:exon7:c.G819A:p.G273G	exonic	ENSG00000120437	NA	synonymous SNV	ENSG00000120437:ENST00000367048:exon7:c.G819A:p.G273G,ENSG00000120437:ENST00000541436:exon7:c.G906A:p.G302G	Score=317;Name=lod=26	NA	6q25.3	NA	Name=Pol2,Pol2-4H8	Name=5	NA	rs3465	0.24	0.24	0.234	0.235224	0.3807	0.1042	0.3458	0.1362	0.2761	0.39	0.09	0.33	0.13	0.3404	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.1795	NA	NA	0.397791	0.166818	NA	0.225	NA	7.5477756
897	1	20490518	20490518	T	C	exonic	PLA2G2C	NA	nonsynonymous SNV	PLA2G2C:NM_001105572:exon3:c.A419G:p.Q140R	exonic	ENSG00000187980	NA	nonsynonymous SNV	ENSG00000187980:ENST00000247992:exon3:c.A419G:p.Q140R,ENSG00000187980:ENST00000429261:exon4:c.A416G:p.Q139R	NA	NA	1p36.12	NA	NA	NA	NA	rs6426616	0.66	0.66	0.68	0.659944	0.5835	0.7272	0.4942	0.7466	0.6697	0.59	0.75	0.54	0.74	0.6079	0.75	0.48	T	0.0	B	0.001	B	0.051	N	1.000	P	-1.445	N	1.73	T	-0.948	T	0.000	T	0.03	-1.938	0.007	3.36	1.073	0.104	5.563	-1.938262	NA	NA	0.594199	0.724164	NA	0.652	NA	7.5477344
897	8	142222445	142222445	T	C	exonic	SLC45A4	NA	nonsynonymous SNV	SLC45A4:NM_001080431:exon7:c.A1999G:p.N667D	exonic	ENSG00000022567	NA	nonsynonymous SNV	ENSG00000022567:ENST00000024061:exon7:c.A1999G:p.N667D,ENSG00000022567:ENST00000433583:exon7:c.A1978G:p.N660D,ENSG00000022567:ENST00000517878:exon7:c.A2152G:p.N718D,ENSG00000022567:ENST00000519067:exon7:c.A1999G:p.N667D	NA	NA	8q24.3	NA	NA	NA	NA	rs3739238	0.7	0.7	0.696	0.710663	0.5875	0.8145	0.5807	0.8374	0.6513	0.56	0.81	0.64	0.83	0.6295	0.83	0.89	T	0.0	B	0.0	B	0.501	N	1.000	P	-1.935	N	2.58	T	-1.002	T	0.000	T	0.009	-0.567	1.445	4.39	0.615	1.197	11.748	-0.566589	NA	0.81	0.569186	0.816614	NA	0.696	NA	7.5471474
898	17	48616658	48616658	G	A	exonic	EPN3	NA	synonymous SNV	EPN3:NM_017957:exon5:c.G873A:p.E291E	exonic	ENSG00000049283	NA	synonymous SNV	ENSG00000049283:ENST00000574464:exon4:c.G873A:p.E291E,ENSG00000049283:ENST00000268933:exon5:c.G873A:p.E291E,ENSG00000049283:ENST00000537145:exon5:c.G957A:p.E319E,ENSG00000049283:ENST00000541226:exon5:c.G624A:p.E208E	Score=426;Name=lod=72	NA	17q21.33	Score=781;Name=V$ISRE_01	NA	NA	NA	rs72835716	0.02	0.02	0.01	0.0169728	0.0457	NA	0.0317	0.0061	0.0092	0.04	NA	0.03	0.01	0.0322	0.044	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.968285	NA	NA	0.044186	0.008171	NA	0.014	NA	7.5445806
898	14	35782253	35782253	A	G	exonic	PSMA6	NA	synonymous SNV	PSMA6:NM_002791:exon5:c.A576G:p.E192E	exonic	ENSG00000100902	NA	synonymous SNV	ENSG00000100902:ENST00000261479:exon5:c.A576G:p.E192E,ENSG00000100902:ENST00000540871:exon5:c.A519G:p.E173E,ENSG00000100902:ENST00000553809:exon5:c.A594G:p.E198E,ENSG00000100902:ENST00000555764:exon5:c.A339G:p.E113E,ENSG00000100902:ENST00000556506:exon5:c.A576G:p.E192E	Score=643;Name=lod=546	NA	14q13.2	Score=806;Name=V$CEBP_C	NA	NA	NA	rs4665	0.02	0.02	0.01	0.0229633	0.0408	NA	0.0288	0.0045	0.0491	0.04	NA	0.02	0.002	0.0382	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.783582	NA	NA	0.043256	0.004993	ID=COSM1128266;OCCURENCE=1(prostate)	NA	NA	7.5444106
898	5	162902516	162902516	T	C	exonic	HMMR	NA	nonsynonymous SNV	HMMR:NM_001142557:exon8:c.T845C:p.V282A,HMMR:NM_012485:exon10:c.T1058C:p.V353A,HMMR:NM_001142556:exon11:c.T1106C:p.V369A,HMMR:NM_012484:exon11:c.T1103C:p.V368A	exonic	ENSG00000072571	NA	nonsynonymous SNV	ENSG00000072571:ENST00000432118:exon8:c.T845C:p.V282A,ENSG00000072571:ENST00000353866:exon10:c.T1058C:p.V353A,ENSG00000072571:ENST00000358715:exon11:c.T1103C:p.V368A,ENSG00000072571:ENST00000393915:exon11:c.T1106C:p.V369A,ENSG00000072571:ENST00000416990:exon11:c.T761C:p.V254A	NA	NA	5q34	NA	NA	NA	NA	rs299290	0.32	0.32	0.323	0.3127	0.2604	0.4841	0.2608	0.2935	0.2526	0.27	0.47	0.28	0.26	0.2839	0.47	0.75	T	0.047	B	0.034	B	0.775	N	1.000	P	0	N	3.25	T	-0.937	T	0.000	T	0.013	-0.601	1.315	-3.29	-0.460	0.122	4.269	-0.601048	NA	0.43	0.244767	0.300272	ID=COSM150009;OCCURENCE=1(stomach)	0.297	NA	7.5442664
898	12	105546172	105546172	G	A	exonic	KIAA1033	NA	nonsynonymous SNV	KIAA1033:NM_015275:exon26:c.G2701A:p.V901I	exonic	ENSG00000136051	NA	nonsynonymous SNV	ENSG00000136051:ENST00000332180:exon26:c.G2701A:p.V901I	Score=672;Name=lod=719	NA	12q23.3	NA	NA	NA	NA	rs1663564	0.97	0.97	0.971	0.978634	0.9235	1	0.9726	1	0.9888	0.92	1	0.96	1	0.9464	1	0.53	T	0.0	B	0.0	B	0.000	N	1.000	P	0.835	L	0.86	T	-0.979	T	0.000	T	0.037	-0.214	2.964	4.05	0.315	2.794	5.606	-0.214011	NA	1	0.919682	0.981532	NA	0.971	NA	7.5437514
898	6	139094937	139094937	C	T	exonic	CCDC28A	NA	synonymous SNV	CCDC28A:NM_015439:exon1:c.C126T:p.S42S	exonic	ENSG00000024862	NA	synonymous SNV	ENSG00000024862:ENST00000332797:exon1:c.C126T:p.S42S	NA	NA	6q24.1	NA	Name=JunD,TAF1,GABP,ELK4,FOXA1_(C-20),YY1,Pol2(phosphoS2),PU.1,Pol2,Pol2-4H8,eGFP-JunD,c-Jun,Sin3Ak-20,HA-E2F1,HEY1,ELF1_(SC-631),FOXA1_(SC-101058),CEBPB,IRF1,TBP	Name=148	NA	rs11154999	0.03	0.03	0.024	0.0229633	0.0507	0.001	0.0591	0.0136	0.0041	0.06	0.0017	0.03	0.01	0.0318	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.609239	NA	NA	0.040465	0.014526	NA	0.014	NA	7.5437016
898	17	33749546	33749546	A	G	exonic	SLFN12	NA	nonsynonymous SNV	SLFN12:NM_018042:exon2:c.T502C:p.C168R	exonic	ENSG00000172123	NA	nonsynonymous SNV	ENSG00000172123:ENST00000304905:exon2:c.T502C:p.C168R,ENSG00000172123:ENST00000452764:exon2:c.T502C:p.C168R,ENSG00000172123:ENST00000394562:exon4:c.T502C:p.C168R	NA	NA	17q12	NA	NA	NA	NA	rs2586514	0.58	0.58	0.541	0.589856	0.5905	0.4504	0.6354	0.6278	0.6493	0.62	0.44	0.62	0.66	0.6029	0.66	0.37	T	0.0	B	0.0	B	.	.	1.000	P	1.795	L	3.92	T	-0.976	T	0.000	T	0.042	-0.135	3.337	-6.47	-2.103	-0.790	1.599	-0.13542	NA	0.24	0.596669	0.630178	NA	0.551	NA	7.5432644
898	8	145011204	145011204	A	G	exonic	PLEC	NA	synonymous SNV	PLEC:NM_201378:exon5:c.T336C:p.A112A,PLEC:NM_201379:exon5:c.T312C:p.A104A,PLEC:NM_201380:exon5:c.T789C:p.A263A,PLEC:NM_201381:exon5:c.T282C:p.A94A,PLEC:NM_201382:exon5:c.T378C:p.A126A,PLEC:NM_201383:exon5:c.T390C:p.A130A,PLEC:NM_201384:exon5:c.T378C:p.A126A,PLEC:NM_000445:exon6:c.T459C:p.A153A	exonic	ENSG00000178209	NA	synonymous SNV	ENSG00000178209:ENST00000322810:exon5:c.T789C:p.A263A,ENSG00000178209:ENST00000345136:exon5:c.T378C:p.A126A,ENSG00000178209:ENST00000354589:exon5:c.T378C:p.A126A,ENSG00000178209:ENST00000354958:exon5:c.T312C:p.A104A,ENSG00000178209:ENST00000356346:exon5:c.T336C:p.A112A,ENSG00000178209:ENST00000357649:exon5:c.T390C:p.A130A,ENSG00000178209:ENST00000398774:exon5:c.T282C:p.A94A,ENSG00000178209:ENST00000526416:exon5:c.T309C:p.A103A,ENSG00000178209:ENST00000527096:exon5:c.T459C:p.A153A,ENSG00000178209:ENST00000527816:exon5:c.T96C:p.A32A,ENSG00000178209:ENST00000528131:exon5:c.T429C:p.A143A,ENSG00000178209:ENST00000436759:exon6:c.T459C:p.A153A,ENSG00000178209:ENST00000528025:exon7:c.T510C:p.A170A	NA	NA	8q24.3	Score=822;Name=V$TAXCREB_01	Name=HA-E2F1	NA	NA	rs6993938	0.24	0.24	0.195	0.232428	0.4066	0.1458	0.2882	0.0613	0.3344	0.4	0.16	0.29	0.06	0.3303	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.877561	NA	NA	0.386777	0.104861	ID=COSM150564,COSM150565,COSM1489113;OCCURENCE=1(breast),1(stomach)	0.29	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117970.2;CLNDSDB=.;CLNDSDBID=.	7.5429896
898	2	88387403	88387403	C	A	exonic	SMYD1	NA	synonymous SNV	SMYD1:NM_198274:exon3:c.C337A:p.R113R	exonic	ENSG00000115593	NA	synonymous SNV	ENSG00000115593:ENST00000419482:exon3:c.C337A:p.R113R,ENSG00000115593:ENST00000444564:exon3:c.C337A:p.R113R	Score=536;Name=lod=202	NA	2p11.2	Score=884;Name=V$MYOD_01	Name=ZNF263	NA	NA	rs1542088	0.55	0.55	0.536	0.510383	0.506	0.9097	0.6023	0.0908	0.6053	0.53	0.93	0.6	0.12	0.6191	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.474318	1.474318	NA	NA	NA	ID=COSM443340;OCCURENCE=1(breast)	0.413	NA	7.5415666
898	15	31115853	31115853	G	T	ncRNA_exonic	HERC2P10	NA	NA	NA	ncRNA_exonic	ENSG00000259845	NA	NA	NA	Score=521;Name=lod=174	NA	15q13.2	NA	Name=Pol2-4H8,YY1,YY1_(C-20),Pol2,TAF1	Name=21	NA	rs798123	0.15	0.15	0.14	0.165335	0.1252	0.0278	0.111	0.3865	0.0879	0.12	0.03	0.14	0.36	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.048689	NA	NA	NA	NA	NA	0.101	NA	7.5414666
898	20	43254298	43254298	C	T	exonic	ADA	NA	synonymous SNV	ADA:NM_000022:exon5:c.G390A:p.V130V	exonic	ENSG00000196839	NA	synonymous SNV	ENSG00000196839:ENST00000372874:exon5:c.G390A:p.V130V,ENSG00000196839:ENST00000536532:exon5:c.G390A:p.V130V,ENSG00000196839:ENST00000537820:exon5:c.G390A:p.V130V	Score=401;Name=lod=57	NA	20q13.12	NA	NA	NA	NA	rs61737144	0.03	0.03	0.029	0.0305511	0.0378	NA	0.0231	0.0643	0.0143	0.04	NA	0.02	0.06	0.0533	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.222061	NA	NA	0.034599	0.057358	ID=COSM1411974;OCCURENCE=1(large_intestine)	0.036	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=Severe_combined_immunodeficiency_disease|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000029301.1|RCV000123531.1;CLNDSDB=MedGen:SNOMED_CT|.;CLNDSDBID=C0085110:31323000|.	7.5409676
898	1	75055419	75055419	T	C	exonic	C1orf173	NA	nonsynonymous SNV	C1orf173:NM_001002912:exon12:c.A2072G:p.H691R	exonic	ENSG00000178965	NA	nonsynonymous SNV	ENSG00000178965:ENST00000420661:exon7:c.A1481G:p.H494R,ENSG00000178965:ENST00000326665:exon12:c.A2072G:p.H691R	NA	NA	1p31.1	NA	NA	NA	NA	rs2305549	0.13	0.13	0.105	0.117612	0.0964	0.2252	0.1455	0.0461	0.1053	0.11	0.21	0.15	0.05	0.1095	0.21	0.52	T	0.664	P	0.244	B	.	.	1.000	P	1.24	L	2.73	T	-0.970	T	0.009	T	0.13	1.085	9.43	-1.84	-0.662	-0.564	3.323	1.08526	NA	0.06	0.086628	0.043577	NA	0.109	NA	7.5408054
898	12	85438499	85438499	G	A	exonic	LRRIQ1	NA	nonsynonymous SNV	LRRIQ1:NM_001079910:exon4:c.G248A:p.C83Y	exonic	ENSG00000133640	NA	nonsynonymous SNV	ENSG00000133640:ENST00000393212:exon4:c.G248A:p.C83Y,ENSG00000133640:ENST00000393217:exon4:c.G248A:p.C83Y	NA	NA	12q21.31	NA	NA	NA	NA	rs3765044	0.21	0.21	0.185	0.206669	0.2604	0.2222	0.3112	0.0446	0.2802	0.26	0.22	0.3	0.05	0.2606	0.3	1	T	0.0	B	0.0	B	0.525	N	1.000	P	0.805	L	0.95	T	-1.012	T	0.000	T	0.247	-3.384	0.001	-2.93	-0.584	-0.698	9.209	-3.383939	NA	0.2	0.271644	0.076325	NA	0.268	NA	7.5406894
898	1	248112836	248112836	A	G	exonic	OR2L8	NA	nonsynonymous SNV	OR2L8:NM_001001963:exon1:c.A677G:p.H226R	exonic	ENSG00000196936	NA	nonsynonymous SNV	ENSG00000196936:ENST00000357191:exon1:c.A677G:p.H226R	NA	NA	1q44	NA	NA	NA	NA	rs4925792	0.78	0.78	0.686	0.761981	0.9503	0.8849	0.9265	0.2965	0.954	0.95	0.85	0.94	0.3	0.8965	0.95	1	T	0.0	B	0.004	B	0.761	N	1.000	P	-1.21	N	9.09	T	-0.905	T	0.000	T	0.019	-3.572	0.001	-3.61	-1.489	-2.750	9.211	-3.572215	NA	0.98	0.94686	0.412619	NA	0.645	NA	7.5396734
898	2	43452183	43452183	A	G	exonic	ZFP36L2	NA	synonymous SNV	ZFP36L2:NM_006887:exon2:c.T760C:p.L254L	exonic	ENSG00000152518	NA	synonymous SNV	ENSG00000152518:ENST00000282388:exon2:c.T760C:p.L254L	Score=645;Name=lod=560	NA	2p21	NA	Name=Pol2,E2F6_(H-50)	Name=138	NA	rs7933	0.44	0.44	0.389	0.500799	0.3718	0.2421	0.3804	0.8222	0.5511	0.36	0.25	0.4	0.82	0.3877	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.378489	1.378489	NA	0.368309	0.693887	ID=COSM442911;OCCURENCE=2(breast)	0.326	NA	7.5388576
898	9	133511393	133511393	C	T	exonic	FUBP3	NA	synonymous SNV	FUBP3:NM_003934:exon18:c.C1590T:p.A530A	exonic	ENSG00000107164	NA	synonymous SNV	ENSG00000107164:ENST00000319725:exon18:c.C1590T:p.A530A	Score=414;Name=lod=64	NA	9q34.12	Score=867;Name=V$SREBP1_02	NA	NA	NA	rs76482042	0.03	0.03	0.021	0.0197684	0.0398	0.0258	0.0245	0.003	0.0123	0.04	0.03	0.03	0.01	0.0379	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.624911	NA	NA	0.050225	0.009447	NA	0.007	NA	7.5387416
898	10	134218269	134218269	C	T	exonic	PWWP2B	NA	nonsynonymous SNV	PWWP2B:NM_001098637:exon2:c.C265T:p.R89C,PWWP2B:NM_138499:exon2:c.C265T:p.R89C	exonic	ENSG00000171813	NA	nonsynonymous SNV	ENSG00000171813:ENST00000305233:exon2:c.C265T:p.R89C,ENSG00000171813:ENST00000368609:exon2:c.C265T:p.R89C	NA	NA	10q26.3	NA	NA	NA	NA	rs11146363	0.54	0.54	0.553	0.51897	0.5944	0.625	0.4712	0.41	0.5133	0.58	0.62	0.5	0.41	0.5751	0.63	0.09	T	0.0	B	0.0	B	0.000	N	1.000	P	-0.205	N	1.49	T	-0.977	T	0.000	T	0.019	1.623	11.38	-7.28	-1.361	0.710	0.959	1.62279	1.62279	0.07	0.625863	0.481508	NA	0.587	NA	7.5379704
898	5	145483844	145483844	A	T	exonic	PLAC8L1	NA	nonsynonymous SNV	PLAC8L1:NM_001029869:exon1:c.T31A:p.C11S	exonic	ENSG00000173261	NA	nonsynonymous SNV	ENSG00000173261:ENST00000311450:exon1:c.T31A:p.C11S,ENSG00000173261:ENST00000512998:exon1:c.T31A:p.C11S	NA	NA	5q32	NA	NA	NA	NA	rs12187913	0.2	0.2	0.162	0.181709	0.2525	0.1984	0.3775	0.0076	0.1881	0.25	0.2	0.3	0.02	0.2641	0.3	0.42	T	0.04	B	0.016	B	0.761	N	1.000	P	0.345	N	1.03	T	-0.960	T	0.000	T	0.035	-0.646	1.154	3.48	0.909	0.477	6.073	-0.645856	NA	0.28	0.278953	0.060145	ID=COSM149960;OCCURENCE=1(stomach)	0.268	NA	7.5377804
898	12	85466723	85466723	G	A	exonic	LRRIQ1	NA	nonsynonymous SNV	LRRIQ1:NM_001079910:exon11:c.G2734A:p.A912T	exonic	ENSG00000133640	NA	nonsynonymous SNV	ENSG00000133640:ENST00000393217:exon11:c.G2734A:p.A912T	NA	NA	12q21.31	NA	NA	Name=6	NA	rs17012533	0.21	0.21	0.179	0.206869	0.2604	0.2222	0.3127	0.0446	0.2802	0.26	0.22	0.31	0.05	0.2607	0.31	0.53	T	0.0	B	0.0	B	0.049	N	1.000	P	-0.345	N	0.71	T	-1.012	T	0.000	T	0.023	-1.071	0.172	1.19	-0.038	0.035	2.068	-1.070835	NA	0.18	0.275465	0.078983	ID=COSM147572;OCCURENCE=1(stomach)	0.275	NA	7.5367684
898	11	5373114	5373114	G	A	exonic	OR51B6	NA	nonsynonymous SNV	OR51B6:NM_001004750:exon1:c.G377A:p.S126N	exonic	ENSG00000176239	NA	nonsynonymous SNV	ENSG00000176239:ENST00000380219:exon1:c.G377A:p.S126N	NA	NA	11p15.4	NA	NA	NA	NA	rs5006888	0.58	0.58	0.55	0.60643	0.6054	0.5446	0.5692	0.587	0.7239	0.59	0.55	0.6	0.59	0.6025	0.63	1	T	0.0	B	0.001	B	0.001	N	0.842	P	-1.83	N	6.75	T	-1.049	T	0.000	T	0.041	-2.607	0	2.67	0.070	2.394	4.973	-2.607379	NA	1	0.589946	0.581554	NA	0.594	NA	7.5354874
898	1	209968684	209968684	C	A	exonic	IRF6	NA	synonymous SNV	IRF6:NM_001206696:exon3:c.G174T:p.S58S,IRF6:NM_006147:exon5:c.G459T:p.S153S	exonic	ENSG00000117595	NA	synonymous SNV	ENSG00000117595:ENST00000542854:exon3:c.G174T:p.S58S,ENSG00000117595:ENST00000456314:exon4:c.G459T:p.S153S,ENSG00000117595:ENST00000367021:exon5:c.G459T:p.S153S	Score=543;Name=lod=215	NA	1q32.2	NA	Name=Pol2(b)	Name=3	NA	rs2013162	0.4	0.4	0.37	0.403754	0.3608	0.5843	0.4769	0.2428	0.4274	0.37	0.57	0.44	0.23	0.402	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.47413	1.47413	NA	0.368488	0.291421	NA	0.457	NA	7.5353786
898	9	79322068	79322068	G	T	exonic	PRUNE2	NA	nonsynonymous SNV	PRUNE2:NM_015225:exon8:c.C5122A:p.H1708N	exonic	ENSG00000106772	NA	nonsynonymous SNV	ENSG00000106772:ENST00000376718:exon8:c.C5122A:p.H1708N,ENSG00000106772:ENST00000428286:exon8:c.C4045A:p.H1349N	NA	NA	9q21.2	NA	NA	NA	NA	rs683866	0.5	0.5	0.502	0.501597	0.5984	0.4454	0.6427	0.3419	0.5757	0.58	0.45	0.63	0.36	0.5833	0.63	0.53	T	0.005	B	0.002	B	0.632	N	0.004	P	0.69	N	1.1	T	-0.927	T	0.000	T	0.064	-1.274	0.044	5.19	2.413	0.848	11.508	-1.274175	NA	0.5	0.616276	0.407526	NA	0.558	NA	7.5353574
899	15	45554267	45554267	C	A	exonic	SLC28A2	NA	nonsynonymous SNV	SLC28A2:NM_004212:exon4:c.C225A:p.S75R	exonic	ENSG00000137860	NA	nonsynonymous SNV	ENSG00000137860:ENST00000560438:exon3:c.C189A:p.S63R,ENSG00000137860:ENST00000347644:exon4:c.C225A:p.S75R	NA	NA	15q21.1	NA	NA	NA	NA	rs1060896	0.34	0.34	0.315	0.313099	0.6322	0.1181	0.3905	0.1082	0.408	0.65	0.06	0.43	0.12	0.5018	0.66	0.57	T	0.0	B	0.0	B	0.238	N	1.000	P	-0.205	N	-1.43	T	-0.960	T	0.000	T	0.426	0.428	6.322	-3.67	-0.195	-1.600	1.300	0.427502	NA	0.56	0.664728	0.19586	NA	0.435	NA	7.5346054
899	1	183604905	183604905	A	G	UTR5	ARPC5	NM_005717:c.-111T>C,NM_001270439:c.-111T>C	NA	NA	upstream	ENSG00000143344,ENSG00000162704	NA	NA	NA	Score=499;Name=lod=142	NA	1q25.3	Score=792;Name=V$OLF1_01	Name=NRSF,RFX5_(N-494),PU.1,Pol2,Pol2(phosphoS2),TAF7_(SQ-8),Sin3Ak-20,HA-E2F1,c-Fos,E2F1,Pol2-4H8,E2F6,HDAC2_(SC-6296),E2F6_(H-50),ETS1,Pol2(b),TAF1,AP-2alpha,ELK4,POU2F2,E2F4,GABP,Nrf1,TBP,CCNT2,ZBTB7A_(SC-34508),NFKB,HEY1,ELF1_(SC-631),PAX5-C20,Oct-2	Name=148	NA	rs2767305	0.47	0.47	0.455	0.513578	0.4672	0.2748	0.5648	0.789	0.3988	0.46	0.22	0.54	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.952684	2.952684	NA	NA	NA	NA	0.529	NA	7.5328
899	9	131584631	131584631	C	T	exonic	ENDOG	NA	synonymous SNV	ENDOG:NM_004435:exon3:c.C636T:p.Y212Y	exonic	ENSG00000167136	NA	synonymous SNV	ENSG00000167136:ENST00000372642:exon3:c.C636T:p.Y212Y	NA	NA	9q34.11	Score=782;Name=V$MEF2_04	NA	Name=2	NA	rs2280844	0.09	0.09	0.084	0.0832668	0.0408	0.0933	0.0432	0.1346	0.0757	0.04	0.11	0.06	0.15	0.0543	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.475314	NA	1	0.039186	0.114163	NA	0.094	NA	7.5323806
899	16	32191941	32191941	C	T	intergenic	HERC2P4,TP53TG3D	dist=28067;dist=72709	NA	NA	ncRNA_exonic	ENSG00000230267	NA	NA	NA	Score=422;Name=lod=69	NA	16p11.2	NA	NA	NA	NA	rs690041	NA	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4679	0.022	1	T	.	.	.	.	.	.	.	.	.	.	.	.	-0.980	T	0.038	T	.	1.345	10.42	2.51	0.211	2.673	5.906	1.345209	1.345209	1	NA	NA	NA	0.014	NA	7.5321
899	17	18918396	18918396	G	C	exonic	SLC5A10	NA	synonymous SNV	SLC5A10:NM_001270648:exon10:c.G1044C:p.A348A,SLC5A10:NM_001270649:exon10:c.G1017C:p.A339A,SLC5A10:NM_001042450:exon11:c.G1125C:p.A375A,SLC5A10:NM_152351:exon11:c.G1173C:p.A391A	exonic	ENSG00000154025	NA	synonymous SNV	ENSG00000154025:ENST00000317977:exon10:c.G924C:p.A308A,ENSG00000154025:ENST00000395642:exon10:c.G924C:p.A308A,ENSG00000154025:ENST00000395643:exon10:c.G1044C:p.A348A,ENSG00000154025:ENST00000417251:exon10:c.G1017C:p.A339A,ENSG00000154025:ENST00000395645:exon11:c.G1125C:p.A375A,ENSG00000154025:ENST00000395647:exon11:c.G1173C:p.A391A	Score=463;Name=lod=102	NA	17p11.2	Score=786;Name=V$YY1_02	NA	NA	NA	rs2074279	0.17	0.17	0.167	0.199081	0.0288	0.3413	0.0663	0.3336	0.1401	0.03	0.33	0.07	0.28	0.0862	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.022331	NA	NA	0.021744	0.274399	NA	0.181	NA	7.5299226
899	11	4674575	4674575	G	A	exonic	OR51E1	NA	synonymous SNV	OR51E1:NM_152430:exon2:c.G819A:p.P273P	exonic	ENSG00000180785	NA	nonsynonymous SNV	ENSG00000180785:ENST00000530215:exon2:c.G149A:p.R50H	NA	NA	11p15.4	Score=813;Name=V$BACH1_01	NA	NA	NA	rs3817098	0.31	0.31	0.304	0.29353	0.499	0.0556	0.4179	0.2012	0.364	0.49	0.07	0.43	0.21	0.4296	0.54	0.22	T	.	.	.	.	.	.	1.000	P	.	.	1.22	T	-0.930	T	0.000	T	.	1.993	12.62	-0.309	-0.131	-1.771	2.452	1.992606	1.992606	NA	0.542345	0.242163	NA	0.283	NA	7.529055
899	20	33971914	33971914	C	T	exonic	UQCC	NA	nonsynonymous SNV	UQCC:NM_018244:exon3:c.G152A:p.R51Q,UQCC:NM_199487:exon3:c.G152A:p.R51Q	exonic	ENSG00000101019	NA	nonsynonymous SNV	ENSG00000101019:ENST00000349714:exon3:c.G152A:p.R51Q,ENSG00000101019:ENST00000359226:exon3:c.G152A:p.R51Q,ENSG00000101019:ENST00000374384:exon3:c.G152A:p.R51Q,ENSG00000101019:ENST00000374385:exon3:c.G152A:p.R51Q,ENSG00000101019:ENST00000397554:exon3:c.G152A:p.R51Q,ENSG00000101019:ENST00000407996:exon3:c.G152A:p.R51Q,ENSG00000101019:ENST00000443429:exon3:c.G152A:p.R51Q,ENSG00000101019:ENST00000453855:exon3:c.G149A:p.R50Q,ENSG00000101019:ENST00000542501:exon3:c.G152A:p.R51Q,ENSG00000101019:ENST00000438533:exon4:c.G194A:p.R65Q	NA	NA	20q11.22	NA	NA	NA	NA	rs4911494	0.59	0.59	0.57	0.527556	0.6203	0.7113	0.7104	0.3056	0.4131	0.61	0.75	0.68	0.31	0.577	0.75	0.35	T	0.022	B	0.004	B	0.107	N	1.000	P	-0.46	N	1.57	T	-0.976	T	0.000	T	0.204	-0.077	3.625	-9.24	-1.403	-0.101	1.846	-0.076667	NA	0.37	0.607674	0.365865	NA	0.522	NA	7.5283594
899	6	28297368	28297368	G	A	exonic	ZSCAN31	NA	synonymous SNV	ZSCAN31:NM_001135216:exon2:c.C93T:p.N31N,ZSCAN31:NM_001243241:exon2:c.C93T:p.N31N,ZSCAN31:NM_030899:exon2:c.C93T:p.N31N	exonic	ENSG00000235109	NA	synonymous SNV	ENSG00000235109:ENST00000344279:exon2:c.C93T:p.N31N,ENSG00000235109:ENST00000439158:exon2:c.C93T:p.N31N,ENSG00000235109:ENST00000439636:exon2:c.C93T:p.N31N,ENSG00000235109:ENST00000447021:exon2:c.C93T:p.N31N,ENSG00000235109:ENST00000453745:exon2:c.C93T:p.N31N,ENSG00000235109:ENST00000426756:exon3:c.C93T:p.N31N,ENSG00000235109:ENST00000434036:exon4:c.C93T:p.N31N,ENSG00000235109:ENST00000446222:exon4:c.C93T:p.N31N,ENSG00000235109:ENST00000396838:exon6:c.C93T:p.N31N,ENSG00000235109:ENST00000414429:exon6:c.C93T:p.N31N	NA	NA	6p22.1	Score=744;Name=V$STAT5A_02	Name=ZNF263	NA	NA	rs41269297	0.02	0.02	0.018	0.0197684	0.0547	NA	0.0288	0.0015	0.0225	0.05	NA	0.02	0.0041	0.033	0.051	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.041964	NA	NA	0.050698	0.011348	NA	0.029	NA	7.5282686
899	3	111996554	111996554	T	C	exonic	SLC9C1	NA	nonsynonymous SNV	SLC9C1:NM_183061:exon5:c.A472G:p.I158V	exonic	ENSG00000172139	NA	nonsynonymous SNV	ENSG00000172139:ENST00000471295:exon4:c.A472G:p.I158V,ENSG00000172139:ENST00000486574:exon4:c.A253G:p.I85V,ENSG00000172139:ENST00000305815:exon5:c.A472G:p.I158V,ENSG00000172139:ENST00000487372:exon5:c.A472G:p.I158V	NA	NA	3q13.2	NA	NA	NA	NA	rs9828502	0.3	0.3	0.28	0.310903	0.2346	0.2976	0.4006	0.3116	0.3384	0.24	0.3	0.38	0.32	0.3006	0.38	0.05	D	0.003	B	0.011	B	0.002	N	1.000	P	1.67	L	3.95	T	-0.934	T	0.000	T	0.09	-1.186	0.08	-1.34	-0.872	0.134	5.697	-1.185856	NA	0.46	0.271279	0.315933	NA	0.29	NA	7.5268544
899	1	11579470	11579470	G	A	exonic	PTCHD2	NA	nonsynonymous SNV	PTCHD2:NM_020780:exon8:c.G1948A:p.A650T	exonic	ENSG00000204624	NA	nonsynonymous SNV	ENSG00000204624:ENST00000294484:exon8:c.G1948A:p.A650T,ENSG00000204624:ENST00000389575:exon8:c.G1948A:p.A650T	NA	NA	1p36.22	NA	NA	NA	NA	rs2072994	0.43	0.43	0.378	0.359824	0.6471	0.2698	0.6556	0.0545	0.3599	0.66	0.28	0.67	0.06	0.5442	0.67	0.46	T	0.004	B	0.002	B	0.603	N	1.000	P	0.49	N	-2.47	D	-0.979	T	0.000	T	0.007	-1.013	0.242	-5.84	-0.682	-0.647	8.041	-1.012886	NA	0.12	0.615689	0.140238	NA	0.449	NA	7.5263444
899	12	133384864	133384864	G	A	exonic	GOLGA3	NA	nonsynonymous SNV	GOLGA3:NM_001172557:exon5:c.C791T:p.P264L,GOLGA3:NM_005895:exon5:c.C791T:p.P264L	exonic	ENSG00000090615	NA	nonsynonymous SNV	ENSG00000090615:ENST00000450791:exon4:c.C791T:p.P264L,ENSG00000090615:ENST00000537452:exon4:c.C791T:p.P264L,ENSG00000090615:ENST00000204726:exon5:c.C791T:p.P264L,ENSG00000090615:ENST00000456883:exon5:c.C791T:p.P264L,ENSG00000090615:ENST00000545875:exon5:c.C791T:p.P264L	NA	NA	12q24.33	NA	NA	NA	NA	rs3741486	0.18	0.18	0.156	0.141973	0.2813	0.1736	0.1571	0.0106	0.1329	0.29	0.18	0.16	0.02	0.2284	0.3	0.02	D	0.011	B	0.002	B	0.718	N	1.000	P	1.155	L	1.63	T	-0.977	T	0.000	T	0.046	-0.689	1.008	0.791	0.310	0.439	9.749	-0.688716	NA	0.11	0.297558	0.051067	NA	0.167	NA	7.5260754
900	6	32826233	32826233	A	G	exonic	PSMB9	NA	synonymous SNV	PSMB9:NM_002800:exon5:c.A483G:p.A161A	exonic	ENSG00000240065	NA	synonymous SNV	ENSG00000240065:ENST00000453265:exon4:c.A351G:p.A117A,ENSG00000240065:ENST00000374859:exon5:c.A483G:p.A161A,ENSG00000240065:ENST00000395330:exon5:c.A414G:p.A138A	NA	NA	6p21.32	Score=880;Name=V$TATA_01	Name=MafF_(M8194),MafK_(SC-477),MafK_(ab50322)	NA	NA	rs20547	0.09	0.09	0.08	0.100439	0.0338	0.2093	0.1095	0.0189	0.1605	0.02	0.23	0.11	0.02	0.0742	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.150174	NA	NA	0.036189	0.021509	NA	0.08	NA	7.5224776
900	9	130197414	130197414	A	G	exonic	ZNF79	NA	nonsynonymous SNV	ZNF79:NM_007135:exon3:c.A151G:p.R51G	exonic	ENSG00000196152	NA	nonsynonymous SNV	ENSG00000196152:ENST00000342483:exon3:c.A151G:p.R51G,ENSG00000196152:ENST00000543471:exon4:c.A79G:p.R27G	NA	NA	9q33.3	NA	NA	NA	NA	rs4504745	0.57	0.57	0.562	0.560903	0.6342	0.4107	0.6513	0.6195	0.4969	0.64	0.41	0.61	0.62	0.5882	0.65	0.05	D	0.0	B	0.0	B	.	.	1.000	P	-0.755	N	5.7	T	-1.079	T	0.000	T	0.029	1.233	9.998	2.5	0.263	0.620	5.010	1.232685	NA	0.19	0.588837	0.647072	NA	0.471	NA	7.5220964
900	6	29555864	29555864	C	T	exonic	OR2H2	NA	nonsynonymous SNV	OR2H2:NM_007160:exon1:c.C143T:p.A48V	exonic	ENSG00000204657	NA	nonsynonymous SNV	ENSG00000204657:ENST00000383640:exon1:c.C143T:p.A48V	NA	NA	6p22.1	NA	NA	NA	NA	rs1233387	0.32	0.32	0.294	0.343051	0.2555	0.4831	0.3559	0.2685	0.3804	0.24	0.48	0.3	0.25	0.303	0.48	0.49	T	0.0	B	0.0	B	0.853	N	1.000	P	-0.16	N	5.37	T	-0.977	T	0.001	T	0.015	0.263	5.424	1.96	-0.043	-1.347	0.810	0.263305	NA	0.5	0.253045	0.260093	ID=COSM451138;OCCURENCE=1(breast)	0.268	NA	7.5217884
900	4	10027542	10027542	C	T	exonic	SLC2A9	NA	nonsynonymous SNV	SLC2A9:NM_001001290:exon2:c.G49A:p.A17T	exonic	ENSG00000109667	NA	nonsynonymous SNV	ENSG00000109667:ENST00000309065:exon2:c.G49A:p.A17T,ENSG00000109667:ENST00000513129:exon2:c.G49A:p.A17T,ENSG00000109667:ENST00000506583:exon3:c.G49A:p.A17T	NA	NA	4p16.1	NA	NA	NA	NA	rs6820230	0.28	0.28	0.288	0.26857	0.2972	0.0972	0.2205	0.5507	0.0685	0.28	0.09	0.23	0.55	0.2428	0.55	.	.	0.0	B	0.001	B	.	.	1.000	P	0.895	L	-1.62	D	-0.958	T	0.000	T	0.008	-0.126	3.384	0.892	0.155	-0.100	3.619	-0.125708	NA	0.39	0.272093	0.493191	NA	0.326	NA	7.5212404
900	19	33467357	33467357	G	A	exonic	C19orf40	NA	synonymous SNV	C19orf40:NM_152266:exon5:c.G417A:p.E139E	exonic	ENSG00000131944	NA	synonymous SNV	ENSG00000131944:ENST00000590179:exon3:c.G132A:p.E44E,ENSG00000131944:ENST00000589646:exon4:c.G132A:p.E44E,ENSG00000131944:ENST00000588258:exon5:c.G417A:p.E139E,ENSG00000131944:ENST00000590281:exon5:c.G417A:p.E139E	Score=461;Name=lod=100	NA	19q13.11	NA	Name=CTCF_(SC-5916),CTCF,Rad21,SMC3_(ab9263),Znf143_(16618-1-AP)	Name=142	NA	rs2304102	0.43	0.43	0.391	0.423922	0.3757	0.4365	0.6023	0.4024	0.363	0.38	0.45	0.56	0.39	0.4029	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.806357	NA	NA	0.367674	0.398774	NA	0.449	NA	7.5203926
900	14	31355096	31355096	C	G	exonic	COCH	NA	nonsynonymous SNV	COCH:NM_001135058:exon10:c.C1055G:p.T352S,COCH:NM_004086:exon11:c.C1055G:p.T352S	exonic	ENSG00000100473	NA	nonsynonymous SNV	ENSG00000100473:ENST00000382493:exon5:c.C608G:p.T203S,ENSG00000100473:ENST00000460581:exon9:c.C719G:p.T240S,ENSG00000100473:ENST00000216361:exon10:c.C1055G:p.T352S,ENSG00000100473:ENST00000475087:exon10:c.C1055G:p.T352S,ENSG00000100473:ENST00000396618:exon11:c.C1055G:p.T352S	NA	NA	14q12	NA	NA	NA	NA	rs1045644	0.47	0.47	0.433	0.411342	0.6342	0.3611	0.6311	0.2141	0.3446	0.63	0.35	0.61	0.24	0.5491	0.63	0.89	T	0.003	B	0.002	B	0.001	N	1.000	P	-1.5	N	-1.14	T	-0.932	T	0.000	T	0.149	1.954	12.49	4.18	0.846	1.416	16.910	1.953829	1.953829	0.69	0.629651	0.282342	NA	0.406	NA	7.5203824
900	3	111918215	111918215	C	T	exonic	SLC9C1	NA	nonsynonymous SNV	SLC9C1:NM_183061:exon20:c.G2476A:p.G826S	exonic	ENSG00000172139	NA	nonsynonymous SNV	ENSG00000172139:ENST00000487372:exon19:c.G2332A:p.G778S,ENSG00000172139:ENST00000305815:exon20:c.G2476A:p.G826S	NA	NA	3q13.2	NA	NA	NA	NA	rs28516377	0.25	0.25	0.267	0.335863	0.2376	0.3393	0.4049	0.3699	0.3384	0.19	0.28	0.33	0.23	0.3059	0.36	0.53	T	0.255	B	0.053	B	0.895	N	1.000	P	0.345	N	-0.98	T	-1.087	T	0.000	T	0.04	-1.394	0.024	-3.0	-0.760	0.009	8.727	-1.394455	NA	0.19	0.269544	0.362335	ID=COSM445305;OCCURENCE=1(breast)	NA	NA	7.5202894
900	4	5749904	5749904	T	C	exonic	EVC	NA	synonymous SNV	EVC:NM_153717:exon8:c.T969C:p.N323N	exonic	ENSG00000072840	NA	synonymous SNV	ENSG00000072840:ENST00000264956:exon8:c.T969C:p.N323N,ENSG00000072840:ENST00000382674:exon8:c.T969C:p.N323N,ENSG00000072840:ENST00000509451:exon8:c.T969C:p.N323N	Score=497;Name=lod=139	NA	4p16.2	NA	Name=c-Jun	Name=109	NA	rs4688963	0.46	0.46	0.468	0.471446	0.3569	0.6171	0.3098	0.4879	0.5317	0.35	0.65	0.3	0.55	0.4177	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.316554	2.316554	NA	0.373256	0.468906	NA	0.399	NA	7.5188106
900	17	45822579	45822579	G	A	exonic	TBX21	NA	synonymous SNV	TBX21:NM_013351:exon6:c.G1455A:p.P485P	exonic	ENSG00000073861	NA	synonymous SNV	ENSG00000073861:ENST00000177694:exon6:c.G1455A:p.P485P	Score=363;Name=lod=40	NA	17q21.32	NA	Name=Rad21,CTCF	NA	NA	rs12721470	0.05	0.05	0.037	0.0880591	0.0427	0.0694	0.0778	0.0628	0.1953	0.04	0.05	0.08	0.06	0.0695	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.028391	NA	NA	0.036279	0.055833	NA	0.036	NA	7.5181876
900	15	86123170	86123170	G	T	exonic	AKAP13	NA	nonsynonymous SNV	AKAP13:NM_006738:exon7:c.G1871T:p.G624V,AKAP13:NM_007200:exon7:c.G1871T:p.G624V	exonic	ENSG00000170776	NA	nonsynonymous SNV	ENSG00000170776:ENST00000361243:exon7:c.G1871T:p.G624V,ENSG00000170776:ENST00000394518:exon7:c.G1871T:p.G624V,ENSG00000170776:ENST00000559362:exon7:c.G1871T:p.G624V	NA	NA	15q25.3	NA	Name=CTCF	NA	NA	rs745191	0.16	0.16	0.148	0.134585	0.3032	0.0169	0.2233	0.0106	0.1871	0.31	0.02	0.25	0.01	0.228	0.31	0.08	T	0.001	B	0.004	B	.	.	1.000	P	0.805	L	2.98	T	-0.914	T	0.000	T	0.378	1.976	12.56	0.36	0.437	0.120	3.196	1.976134	1.976134	0	0.28402	0.048138	NA	0.232	NA	7.5181134
900	6	144181619	144181619	A	G	exonic	LTV1	NA	synonymous SNV	LTV1:NM_032860:exon7:c.A852G:p.E284E	exonic	ENSG00000135521	NA	synonymous SNV	ENSG00000135521:ENST00000367576:exon7:c.A852G:p.E284E	Score=471;Name=lod=109	NA	6q24.2	NA	NA	Name=3	NA	rs7454959	0.04	0.04	0.036	0.0503195	0.0537	0.002	0.0231	0.0688	0.091	0.05	0.01	0.03	0.06	0.0499	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.128152	NA	NA	0.04501	0.054698	NA	0.043	NA	7.5180566
900	3	50332697	50332697	G	A	exonic	HYAL3	NA	nonsynonymous SNV	HYAL3:NM_001200029:exon2:c.C337T:p.H113Y,HYAL3:NM_001200030:exon2:c.C337T:p.H113Y,HYAL3:NM_003549:exon2:c.C337T:p.H113Y	exonic	ENSG00000186792	NA	nonsynonymous SNV	ENSG00000186792:ENST00000336307:exon2:c.C337T:p.H113Y,ENSG00000186792:ENST00000359051:exon2:c.C337T:p.H113Y,ENSG00000186792:ENST00000435141:exon2:c.C337T:p.H113Y,ENSG00000186792:ENST00000450982:exon2:c.C337T:p.H113Y	NA	NA	3p21.31	NA	NA	NA	NA	rs13100173	0.27	0.27	0.247	0.245008	0.4632	0.0853	0.353	0.1339	0.2587	0.45	0.09	0.38	0.11	0.3689	0.48	0.04	D	0.534	P	0.15	B	0.403	U	1.000	P	1.32	L	1.97	T	-0.916	T	0.000	T	0.257	-0.319	2.485	1.65	0.594	0.833	8.069	-0.3188	NA	0.09	0.48407	0.165002	NA	0.275	NA	7.5171634
900	15	78922194	78922194	G	A	exonic	CHRNB4	NA	synonymous SNV	CHRNB4:NM_000750:exon5:c.C453T:p.S151S	exonic	ENSG00000117971	NA	synonymous SNV	ENSG00000117971:ENST00000261751:exon5:c.C453T:p.S151S	Score=658;Name=lod=630	NA	15q25.1	NA	NA	NA	Score=83;Name=837413_3_+_83	rs55919125	0.03	0.03	0.028	0.0221645	0.0646	NA	0.0389	0.0015	0.0174	0.06	NA	0.04	NA	0.0345	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.868648	NA	NA	0.05078	0.012067	NA	0.022	NA	7.5167866
900	6	29855902	29855902	G	A	ncRNA_exonic	HLA-H	NA	NA	NA	ncRNA_exonic	ENSG00000206341,ENSG00000230521	NA	NA	NA	Score=358;Name=lod=38	NA	6p22.1	NA	Name=CTCF,NFKB,Pol2-4H8,Pol2	Name=64	NA	rs62389357	0.12	0.12	0.046	0.102037	0.0636	0.2371	0.0476	0.0015	0.1769	0.11	0.22	0.07	0.08	0.0866	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.420243	NA	NA	NA	NA	NA	0.087	NA	7.5164666
901	1	111146220	111146220	C	G	exonic	KCNA2	NA	synonymous SNV	KCNA2:NM_004974:exon3:c.G1185C:p.A395A	exonic	ENSG00000177301	NA	synonymous SNV	ENSG00000177301:ENST00000440270:exon2:c.G1185C:p.A395A,ENSG00000177301:ENST00000316361:exon3:c.G1185C:p.A395A,ENSG00000177301:ENST00000485317:exon3:c.G1185C:p.A395A	Score=783;Name=lod=2029	NA	1p13.3	Score=874;Name=V$GR_Q6	NA	NA	NA	rs78349687	0.02	0.02	0.012	0.0341454	0.0427	0.001	0.0274	0.0144	0.091	0.05	NA	0.04	0.0041	0.0532	0.056	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.373529	NA	NA	0.056279	0.017022	NA	0.014	NA	7.5144876
901	17	1636934	1636934	A	G	exonic	WDR81	NA	nonsynonymous SNV	WDR81:NM_001163673:exon7:c.A994G:p.M332V,WDR81:NM_001163809:exon7:c.A4603G:p.M1535V,WDR81:NM_001163811:exon7:c.A922G:p.M308V,WDR81:NM_152348:exon8:c.A1450G:p.M484V	exonic	ENSG00000167716	NA	nonsynonymous SNV	ENSG00000167716:ENST00000418841:exon4:c.A358G:p.M120V,ENSG00000167716:ENST00000468539:exon4:c.A508G:p.M170V,ENSG00000167716:ENST00000545662:exon5:c.A496G:p.M166V,ENSG00000167716:ENST00000446363:exon6:c.A520G:p.M174V,ENSG00000167716:ENST00000409644:exon7:c.A4603G:p.M1535V,ENSG00000167716:ENST00000419248:exon7:c.A922G:p.M308V,ENSG00000167716:ENST00000437219:exon7:c.A994G:p.M332V,ENSG00000167716:ENST00000309182:exon8:c.A1450G:p.M484V	NA	NA	17p13.3	NA	NA	NA	NA	rs3809870	0.3	0.3	0.26	0.278954	0.2744	0.4861	0.2219	0.177	0.2485	0.27	0.49	0.24	0.18	0.2811	0.49	0.6	T	0.0	B	0.0	B	0.257	N	1.000	P	0.345	N	-1.07	T	-1.022	T	0.000	T	0.136	-3.187	0.001	-1.04	-0.539	-0.684	9.665	-3.187157	NA	0.31	0.26352	0.182727	NA	0.181	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118855.2;CLNDSDB=.;CLNDSDBID=.	7.5143134
901	7	814788	814788	G	A	exonic	HEATR2	NA	nonsynonymous SNV	HEATR2:NM_017802:exon11:c.G2228A:p.R743K	exonic	ENSG00000164818	NA	nonsynonymous SNV	ENSG00000164818:ENST00000403952:exon4:c.G503A:p.R168K,ENSG00000164818:ENST00000297440:exon11:c.G2228A:p.R743K,ENSG00000164818:ENST00000313147:exon11:c.G2228A:p.R743K	Score=391;Name=lod=52	NA	7p22.3	NA	NA	NA	NA	rs3922641	0.65	0.65	0.632	0.66873	0.6054	0.62	0.6744	0.7413	0.682	0.59	0.63	0.66	0.78	0.6211	0.78	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-1.52	N	-0.18	T	-0.929	T	0.000	T	0.162	-0.019	3.916	2.76	0.009	0.903	8.382	-0.019136	NA	1	0.59314	0.692919	NA	0.616	NA	7.5136934
901	10	125528048	125528048	G	A	exonic	CPXM2	NA	synonymous SNV	CPXM2:NM_198148:exon9:c.C1293T:p.Y431Y	exonic	ENSG00000121898	NA	synonymous SNV	ENSG00000121898:ENST00000241305:exon9:c.C1293T:p.Y431Y	Score=594;Name=lod=345	NA	10q26.13	NA	Name=CTCF	Name=2	NA	rs1219725	0.4	0.4	0.377	0.378794	0.3738	0.5992	0.4784	0.1528	0.3916	0.38	0.61	0.44	0.15	0.4055	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.714614	NA	NA	0.375349	0.191557	NA	0.304	NA	7.5120176
901	1	245849969	245849969	C	T	exonic	KIF26B	NA	synonymous SNV	KIF26B:NM_018012:exon12:c.C3684T:p.P1228P	exonic	ENSG00000162849	NA	synonymous SNV	ENSG00000162849:ENST00000366518:exon9:c.C2541T:p.P847P,ENSG00000162849:ENST00000407071:exon12:c.C3684T:p.P1228P	Score=579;Name=lod=301	NA	1q44	Score=772;Name=V$MYOGNF1_01	NA	NA	NA	rs116468848	0.02	0.02	0.022	0.0379393	0.0507	0.001	0.0418	0.0023	0.1084	0.06	NA	0.02	0.0041	0.0544	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.867533	NA	NA	0.04987	0.008916	NA	0.022	NA	7.5116966
901	20	55108617	55108617	C	A	exonic	FAM209B	NA	nonsynonymous SNV	FAM209B:NM_001013646:exon1:c.C220A:p.Q74K	exonic	ENSG00000213714	NA	nonsynonymous SNV	ENSG00000213714:ENST00000371325:exon1:c.C220A:p.Q74K	NA	NA	20q13.31	NA	NA	NA	NA	rs3209183	0.66	0.66	0.673	0.664736	0.6243	0.5456	0.5086	0.9713	0.5256	0.63	0.52	0.56	0.96	0.5888	0.96	1	T	0.0	B	0.0	B	0.003	N	1.000	P	-1.055	N	3.44	T	-1.006	T	0.000	T	0.029	-2.951	0.001	2.8	0.297	2.038	5.987	-2.951362	NA	1	0.609651	0.913073	NA	0.703	NA	7.5105824
901	17	20108239	20108239	A	T	exonic	SPECC1	NA	nonsynonymous SNV	SPECC1:NM_001033554:exon2:c.A634T:p.M212L,SPECC1:NM_001033555:exon2:c.A634T:p.M212L,SPECC1:NM_001243438:exon2:c.A634T:p.M212L,SPECC1:NM_001033553:exon4:c.A877T:p.M293L,SPECC1:NM_001243439:exon4:c.A877T:p.M293L,SPECC1:NM_152904:exon4:c.A877T:p.M293L	exonic	ENSG00000128487	NA	nonsynonymous SNV	ENSG00000128487:ENST00000395522:exon2:c.A634T:p.M212L,ENSG00000128487:ENST00000395525:exon2:c.A634T:p.M212L,ENSG00000128487:ENST00000395530:exon2:c.A634T:p.M212L,ENSG00000128487:ENST00000261503:exon4:c.A877T:p.M293L,ENSG00000128487:ENST00000395527:exon4:c.A877T:p.M293L,ENSG00000128487:ENST00000395529:exon4:c.A877T:p.M293L	NA	NA	17p11.2	NA	NA	NA	NA	rs2703806	0.79	0.79	0.819	0.819289	0.5716	0.9861	0.6686	0.9713	0.8037	0.59	0.99	0.64	0.97	0.6741	0.99	1	T	0.0	B	0.0	B	0.738	N	1.000	P	-1.845	N	3.17	T	-0.902	T	0.000	T	0.028	-1.185	0.08	-10.8	-2.451	-2.366	3.700	-1.185106	NA	1	0.577326	0.909442	NA	0.688	NA	7.5103074
901	10	117486763	117486763	G	T	exonic	ATRNL1	NA	synonymous SNV	ATRNL1:NM_207303:exon27:c.G3801T:p.L1267L	exonic	ENSG00000107518	NA	synonymous SNV	ENSG00000107518:ENST00000303745:exon7:c.G180T:p.L60L,ENSG00000107518:ENST00000423111:exon11:c.G954T:p.L318L,ENSG00000107518:ENST00000355044:exon27:c.G3801T:p.L1267L	Score=624;Name=lod=456	NA	10q25.3	NA	Name=GATA-2	Name=2	NA	rs2254619	0.22	0.22	0.192	0.201078	0.4195	0.0387	0.2565	0.0983	0.2434	0.4	0.04	0.28	0.09	0.3255	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.358663	NA	NA	0.411395	0.138448	NA	0.174	NA	7.5102716
901	6	30030057	30030057	G	A	exonic	ZNRD1	NA	synonymous SNV	ZNRD1:NM_170783:exon3:c.G303A:p.Q101Q,ZNRD1:NM_014596:exon4:c.G303A:p.Q101Q	exonic	ENSG00000066379	NA	synonymous SNV	ENSG00000066379:ENST00000332435:exon3:c.G303A:p.Q101Q,ENSG00000066379:ENST00000359374:exon4:c.G303A:p.Q101Q,ENSG00000066379:ENST00000376782:exon4:c.G303A:p.Q101Q,ENSG00000066379:ENST00000376785:exon4:c.G303A:p.Q101Q	Score=490;Name=lod=131	NA	6p22.1	NA	NA	Name=4	NA	rs10745	0.05	0.05	0.055	0.0413339	0.0507	0.0357	0.0403	0.0499	0.0266	0.05	0.04	0.04	0.05	0.0481	0.058	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.366246	1.366246	NA	0.05814	0.051291	NA	0.029	NA	7.5097266
901	1	109479978	109479978	G	T	exonic	CLCC1	NA	nonsynonymous SNV	CLCC1:NM_001048210:exon10:c.C1104A:p.S368R,CLCC1:NM_015127:exon10:c.C954A:p.S318R	exonic	ENSG00000121940	NA	nonsynonymous SNV	ENSG00000121940:ENST00000348264:exon5:c.C549A:p.S183R,ENSG00000121940:ENST00000369968:exon5:c.C549A:p.S183R,ENSG00000121940:ENST00000302500:exon7:c.C741A:p.S247R,ENSG00000121940:ENST00000369969:exon7:c.C741A:p.S247R,ENSG00000121940:ENST00000369970:exon9:c.C954A:p.S318R,ENSG00000121940:ENST00000356970:exon10:c.C1104A:p.S368R,ENSG00000121940:ENST00000369971:exon10:c.C1104A:p.S368R,ENSG00000121940:ENST00000415331:exon10:c.C954A:p.S318R	NA	NA	1p13.3	Score=836;Name=V$OLF1_01	NA	NA	NA	rs168107	0.29	0.29	0.3	0.307109	0.2803	0.0377	0.2147	0.6233	0.2505	0.28	0.03	0.25	0.62	0.2782	0.62	1	T	0.003	B	0.002	B	0.001	N	0.998	P	-1.975	N	0.99	T	-0.937	T	0.006	T	0.037	-2.06	0.006	1.71	-0.136	0.381	8.446	-2.059776	NA	1	0.267093	0.563777	NA	0.29	NA	7.5077404
902	11	33581306	33581306	G	A	exonic	KIAA1549L	NA	synonymous SNV	KIAA1549L:NM_012194:exon6:c.G2976A:p.T992T	exonic	ENSG00000110427	NA	synonymous SNV	ENSG00000110427:ENST00000265654:exon6:c.G2994A:p.T998T,ENSG00000110427:ENST00000321505:exon6:c.G2976A:p.T992T,ENSG00000110427:ENST00000389726:exon6:c.G2994A:p.T998T	Score=428;Name=lod=73	NA	11p13	NA	NA	NA	NA	rs2281380	0.39	0.39	0.381	0.388978	0.3887	0.3264	0.3213	0.469	0.3937	0.4	0.33	0.35	0.46	0.3877	0.46	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.931	T	0.000	T	.	0.664	7.557	-5.21	-0.823	-0.872	5.833	0.663994	NA	NA	0.386015	0.459227	NA	0.391	NA	7.5042516
902	8	144998190	144998190	A	G	exonic	PLEC	NA	synonymous SNV	PLEC:NM_201378:exon31:c.T5865C:p.A1955A,PLEC:NM_201379:exon31:c.T5841C:p.A1947A,PLEC:NM_201380:exon31:c.T6318C:p.A2106A,PLEC:NM_201381:exon31:c.T5811C:p.A1937A,PLEC:NM_201382:exon31:c.T5907C:p.A1969A,PLEC:NM_201383:exon31:c.T5919C:p.A1973A,PLEC:NM_201384:exon31:c.T5907C:p.A1969A,PLEC:NM_000445:exon32:c.T5988C:p.A1996A	exonic	ENSG00000178209	NA	synonymous SNV	ENSG00000178209:ENST00000322810:exon31:c.T6318C:p.A2106A,ENSG00000178209:ENST00000345136:exon31:c.T5907C:p.A1969A,ENSG00000178209:ENST00000354589:exon31:c.T5907C:p.A1969A,ENSG00000178209:ENST00000354958:exon31:c.T5841C:p.A1947A,ENSG00000178209:ENST00000356346:exon31:c.T5865C:p.A1955A,ENSG00000178209:ENST00000357649:exon31:c.T5919C:p.A1973A,ENSG00000178209:ENST00000398774:exon31:c.T5811C:p.A1937A,ENSG00000178209:ENST00000527096:exon31:c.T5976C:p.A1992A,ENSG00000178209:ENST00000436759:exon32:c.T5988C:p.A1996A	NA	NA	8q24.3	Score=770;Name=V$MIF1_01	Name=Pol2	NA	NA	rs2857829	0.25	0.25	0.199	0.230831	0.4274	0.1429	0.2968	0.028	0.3466	0.42	0.16	0.3	0.03	0.3616	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.753801	NA	NA	0.373666	0.082531	NA	0.138	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000078882.3;CLNDSDB=.;CLNDSDBID=.	7.5040006
902	19	15222492	15222492	G	A	exonic	SYDE1	NA	synonymous SNV	SYDE1:NM_033025:exon6:c.G1467A:p.Q489Q	exonic	ENSG00000105137	NA	synonymous SNV	ENSG00000105137:ENST00000600252:exon3:c.G438A:p.Q146Q,ENSG00000105137:ENST00000342784:exon6:c.G1467A:p.Q489Q,ENSG00000105137:ENST00000600440:exon6:c.G1266A:p.Q422Q	Score=537;Name=lod=203	NA	19p13.12	Score=942;Name=V$SP1_01	NA	NA	NA	rs33980637	0.03	0.03	0.029	0.0413339	0.0517	0.0218	0.0389	0.0045	0.1022	0.05	0.01	0.04	0.01	0.0526	0.059	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.770305	NA	NA	0.058488	0.012937	NA	0.08	NA	7.5038786
902	7	103141351	103141351	G	A	exonic	RELN	NA	synonymous SNV	RELN:NM_005045:exon53:c.C8508T:p.F2836F,RELN:NM_173054:exon53:c.C8508T:p.F2836F	exonic	ENSG00000189056	NA	synonymous SNV	ENSG00000189056:ENST00000343529:exon53:c.C8508T:p.F2836F,ENSG00000189056:ENST00000424685:exon53:c.C8508T:p.F2836F,ENSG00000189056:ENST00000428762:exon53:c.C8508T:p.F2836F	Score=658;Name=lod=630	NA	7q22.1	NA	NA	NA	NA	rs2229862	0.03	0.03	0.025	0.0215655	0.0736	NA	0.0288	0.0008	0.0133	0.07	NA	0.03	0.002	0.0353	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.037673	NA	NA	0.054302	0.012256	NA	0.036	CLINSIG=other|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=mult|single;CLNACC=RCV000081245.3|RCV000127774.1;CLNDSDB=.|.;CLNDSDBID=.|.	7.5034646
902	4	177100644	177100644	G	A	exonic	WDR17	NA	nonsynonymous SNV	WDR17:NM_181265:exon29:c.G3766A:p.A1256T,WDR17:NM_170710:exon31:c.G3883A:p.A1295T	exonic	ENSG00000150627	NA	nonsynonymous SNV	ENSG00000150627:ENST00000508596:exon29:c.G3766A:p.A1256T,ENSG00000150627:ENST00000393643:exon30:c.G3811A:p.A1271T,ENSG00000150627:ENST00000507824:exon30:c.G3808A:p.A1270T,ENSG00000150627:ENST00000280190:exon31:c.G3883A:p.A1295T	Score=366;Name=lod=41	NA	4q34.2	NA	NA	NA	NA	rs11736872	0.2	0.2	0.184	0.207069	0.2783	0.13	0.2104	0.1369	0.3057	0.28	0.11	0.23	0.14	0.2547	0.3	0.51	T	0.02	B	0.009	B	0.002	N	0.002	P	0.2	N	0.4	T	-0.962	T	0.000	T	0.224	2.06	12.85	-0.869	-0.180	0.596	10.613	2.060188	2.060188	0.46	0.297442	0.153881	NA	0.181	NA	7.5028914
902	2	139308127	139308127	G	A	exonic	SPOPL	NA	synonymous SNV	SPOPL:NM_001001664:exon3:c.G153A:p.V51V	exonic	ENSG00000144228	NA	synonymous SNV	ENSG00000144228:ENST00000420679:exon2:c.G153A:p.V51V,ENSG00000144228:ENST00000280098:exon3:c.G153A:p.V51V,ENSG00000144228:ENST00000430968:exon3:c.G153A:p.V51V	Score=686;Name=lod=818	NA	2q22.1	Score=785;Name=V$XBP1_01	NA	NA	NA	rs35257103	0.03	0.03	0.028	0.0171725	0.0626	NA	0.013	0.0083	0.0031	0.07	NA	0.01	0.01	0.0364	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.941454	NA	NA	0.064798	0.014072	NA	0.014	NA	7.5028686
902	1	156255456	156255456	G	A	exonic	TMEM79	NA	nonsynonymous SNV	TMEM79:NM_032323:exon2:c.G439A:p.V147M	exonic	ENSG00000163472	NA	nonsynonymous SNV	ENSG00000163472:ENST00000295694:exon2:c.G439A:p.V147M,ENSG00000163472:ENST00000405535:exon2:c.G439A:p.V147M	NA	Name=mean corpuscular hemoglobin concentration	1q22	NA	NA	NA	NA	rs6684514	0.21	0.21	0.184	0.202875	0.2694	0.2272	0.2781	0.0794	0.2229	0.27	0.24	0.23	0.08	0.2682	0.29	0.13	T	0.132	B	0.057	B	0.708	N	1.000	P	1.04	L	0.73	T	-1.036	T	0.033	T	0.053	0.28	5.517	0.157	-0.510	0.585	3.24	0.280376	NA	0.17	0.293256	0.118475	NA	0.21	NA	7.5024774
902	8	57358251	57358251	C	T	intronic	PENK	NA	NA	NA	exonic	ENSG00000181195	NA	nonsynonymous SNV	ENSG00000181195:ENST00000518770:exon3:c.G262A:p.G88S	NA	NA	8q12.1	NA	NA	Name=8	NA	rs3808634	0.24	0.24	0.231	0.223243	0.2952	0.2351	0.3631	0.0998	0.2045	0.3	0.23	0.32	0.12	0.3695	0.32	0	D	0.035	B	0.003	B	.	.	1.000	P	.	.	.	.	-0.983	T	0.000	T	0.03	2.519	14.38	-0.098	-0.105	-0.461	2.394	2.518738	2.518738	NA	NA	NA	NA	0.196	NA	7.5019667
902	12	125434580	125434580	C	T	exonic	DHX37	NA	nonsynonymous SNV	DHX37:NM_032656:exon25:c.G3242A:p.R1081Q	exonic	ENSG00000150990	NA	nonsynonymous SNV	ENSG00000150990:ENST00000544745:exon22:c.G2603A:p.R868Q,ENSG00000150990:ENST00000308736:exon25:c.G3242A:p.R1081Q	NA	NA	12q24.31	NA	NA	NA	NA	rs4447263	0.62	0.62	0.594	0.648363	0.6004	0.8452	0.6643	0.4115	0.8037	0.59	0.84	0.65	0.38	0.6448	0.84	0.34	T	0.04	B	0.005	B	0.836	N	1.000	P	1.24	L	4.12	T	-0.903	T	0.000	T	0.055	1.487	10.92	-8.3	-2.257	-0.027	27.694	1.487	1.487	0.5	0.587442	0.412846	NA	0.486	NA	7.5006914
902	6	57467100	57467100	G	C	exonic	PRIM2	NA	unknown	UNKNOWN	exonic	ENSG00000146143	NA	stoploss	ENSG00000146143:ENST00000607273:exon11:c.G1041C:p.X347Y	Score=531;Name=lod=191	NA	6p11.2	Score=777;Name=V$MEF2_01	NA	NA	NA	rs4535533	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.973848	1.973848	NA	NA	NA	NA	0.551	NA	7.5
902	3	186501367	186501367	T	C	UTR5	EIF4A2	NM_001967:c.-33T>C	NA	NA	ncRNA_exonic	ENSG00000263826	NA	NA	NA	Score=461;Name=lod=100	NA	3q27.3	NA	Name=c-Myc,STAT1,NFKB,HEY1,ZEB1_(SC-25388),BCL3,PAX5-C20,Oct-2,p300_(N-15),TCF12,GTF2B,TBP,GTF2F1_(RAP-74),IRF1,CHD2_(N-1250),JunD,eGFP-JunB,GATA-1,Pol2(b),TAF1,ETS1,CTCFL_(SC-98982),POU2F2,ZBTB33,Pol2,NELFe,NRSF,SP1,YY1,Pol2(phosphoS2),Egr-1,Sin3Ak-20,YY1_(C-20),HA-E2F1,BCLAF1_(M33-P5B11),TAF7_(SQ-8),KAP1,Pol2-4H8,TR4	Name=148	NA	rs371038888	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000008238	0.0002	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.943441	2.943441	NA	0	0.000227	NA	NA	NA	7.4999918
902	9	115759518	115759518	C	T	exonic	ZNF883	NA	nonsynonymous SNV	ZNF883:NM_001101338:exon5:c.G1022A:p.R341Q	ncRNA_exonic	ENSG00000228623	NA	NA	NA	NA	NA	9q32	NA	Name=SETDB1,KAP1	Name=8	NA	rs376231861	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00008293	0.0002	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.926876	NA	NA	0	0.000234	NA	NA	NA	7.4999171
902	6	32609192	32609192	A	G	exonic	HLA-DQA1	NA	nonsynonymous SNV	HLA-DQA1:NM_002122:exon2:c.A188G:p.E63G	exonic	ENSG00000196735	NA	nonsynonymous SNV	ENSG00000196735:ENST00000343139:exon2:c.A188G:p.E63G,ENSG00000196735:ENST00000374949:exon2:c.A188G:p.E63G,ENSG00000196735:ENST00000395363:exon2:c.A188G:p.E63G,ENSG00000196735:ENST00000496318:exon2:c.A188G:p.E63G	NA	NA	6p21.32	NA	Name=Pol2-4H8	NA	NA	rs1142323	0.3	0.3	0.283	0.283347	0.3002	0.246	0.3487	0.3275	0.1984	0.28	0.23	0.37	0.33	0.2894	0.37	0.34	T	0.007	B	0.01	B	0.710	U	1.000	P	0.765	N	5.67	T	-1.065	T	0.045	T	0.559	-1.18	0.083	1.4	0.191	0.495	9.286	-1.179542	NA	0.29	0.243905	0.262284	NA	0.116	NA	7.4998284
902	19	20748558	20748558	G	A	UTR5	ZNF737	NM_001159293:c.-112C>T	NA	NA	ncRNA_UTR5	ENSG00000237440	NA	NA	NA	NA	NA	19p12	NA	Name=TBP,HEY1,IRF3,Sin3Ak-20,c-Fos,GATA-2,Pol2-4H8,NF-YB,Oct-2,ELF1_(SC-631),SP1,Pol2,POU2F2,TAF1,NF-YA	Name=140	NA	NA	NA	NA	NA	0.000399361	0.001	NA	0.0014	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.317954	NA	NA	NA	NA	NA	NA	NA	7.499
902	11	5537161	5537161	A	G	exonic	UBQLNL	NA	nonsynonymous SNV	UBQLNL:NM_145053:exon1:c.T511C:p.C171R	exonic	ENSG00000175518	NA	nonsynonymous SNV	ENSG00000175518:ENST00000380184:exon1:c.T511C:p.C171R	NA	NA	11p15.4	NA	NA	NA	NA	rs2047456	0.33	0.33	0.299	0.315695	0.2555	0.376	0.3487	0.3328	0.2689	0.27	0.41	0.31	0.35	0.308	0.41	0.22	T	0.0	B	0.0	B	0.130	N	1.000	P	-0.345	N	0.9	T	-0.959	T	0.000	T	0.024	-2.103	0.006	-3.1	-0.345	-0.203	3.456	-2.103227	NA	0.89	0.272167	0.320309	NA	0.268	NA	7.4976664
902	12	45417666	45417666	T	C	exonic	DBX2	NA	nonsynonymous SNV	DBX2:NM_001004329:exon3:c.A511G:p.M171V	exonic	ENSG00000185610	NA	nonsynonymous SNV	ENSG00000185610:ENST00000332700:exon3:c.A511G:p.M171V	NA	NA	12q12	NA	NA	NA	NA	rs2731038	0.68	0.68	0.683	0.725839	0.5835	0.8075	0.7277	0.6604	0.8753	0.58	0.8	0.71	0.66	0.6662	0.8	1	T	0.0	B	0.0	B	0.118	N	1.000	P	-0.46	N	-2.61	D	-0.946	T	0.000	T	0.018	-2.024	0.006	3.42	0.708	-0.138	6.420	-2.024124	NA	1	0.58814	0.620971	NA	0.587	NA	7.4954934
903	17	26519204	26519204	C	T	exonic	NLK	NA	synonymous SNV	NLK:NM_016231:exon10:c.C1494T:p.I498I	exonic	ENSG00000087095	NA	synonymous SNV	ENSG00000087095:ENST00000407008:exon10:c.C1494T:p.I498I,ENSG00000087095:ENST00000496808:exon10:c.C1338T:p.I446I	Score=687;Name=lod=825	NA	17q11.2	Score=838;Name=V$TAXCREB_01	NA	NA	NA	rs3182380	0.03	0.03	0.023	0.0195687	0.0616	NA	0.0375	0.0023	0.0072	0.06	NA	0.04	0.002	0.0524	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.178473	NA	NA	0.057674	0.013845	NA	0.072	NA	7.4949926
903	1	3425183	3425183	G	A	exonic	MEGF6	NA	synonymous SNV	MEGF6:NM_001409:exon13:c.C1599T:p.C533C	exonic	ENSG00000162591	NA	synonymous SNV	ENSG00000162591:ENST00000294599:exon10:c.C1284T:p.C428C,ENSG00000162591:ENST00000356575:exon13:c.C1599T:p.C533C,ENSG00000162591:ENST00000485002:exon13:c.C1620T:p.C540C	Score=304;Name=lod=23	NA	1p36.32	Score=827;Name=V$NFKB_Q6	NA	NA	NA	rs61735125	0.06	0.06	0.058	0.0648962	0.0507	0.1032	0.0519	0.028	0.0992	0.05	0.09	0.06	0.03	0.062	0.098	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.008036	NA	NA	0.059719	0.034772	NA	0.065	NA	7.4942476
903	1	70904800	70904800	G	T	exonic	CTH	NA	nonsynonymous SNV	CTH:NM_001190463:exon11:c.G1112T:p.S371I,CTH:NM_153742:exon11:c.G1076T:p.S359I,CTH:NM_001902:exon12:c.G1208T:p.S403I	exonic	ENSG00000116761	NA	nonsynonymous SNV	ENSG00000116761:ENST00000346806:exon11:c.G1076T:p.S359I,ENSG00000116761:ENST00000411986:exon11:c.G1112T:p.S371I,ENSG00000116761:ENST00000370938:exon12:c.G1208T:p.S403I	NA	NA	1p31.1	NA	NA	NA	NA	rs1021737	0.23	0.23	0.203	0.205272	0.2584	0.2173	0.3703	0.0628	0.2137	0.27	0.22	0.36	0.08	0.277	0.36	0.12	T	0.343	B	0.206	B	0.335	N	1.000	P	0	N	-0.65	T	-1.095	T	0.073	T	0.293	-0.158	3.23	0.838	0.308	0.035	6.440	-0.15773	NA	0.11	0.304302	0.108034	NA	0.159	CLINSIG=pathogenic;CLNDBN=Homocysteine\x2c_total_plasma\x2c_elevated;CLNREVSTAT=single;CLNACC=RCV000003075.1;CLNDSDB=.;CLNDSDBID=.	7.4936314
903	4	57190356	57190356	G	A	exonic	KIAA1211	NA	synonymous SNV	KIAA1211:NM_020722:exon10:c.G3465A:p.R1155R	exonic	ENSG00000109265	NA	synonymous SNV	ENSG00000109265:ENST00000504228:exon8:c.G3465A:p.R1155R,ENSG00000109265:ENST00000541073:exon9:c.G3444A:p.R1148R,ENSG00000109265:ENST00000264229:exon10:c.G3465A:p.R1155R	Score=381;Name=lod=47	NA	4q12	Score=733;Name=V$SEF1_C	Name=Egr-1	NA	NA	rs7695701	0.23	0.23	0.206	0.225439	0.4135	0.0704	0.268	0.0968	0.3354	0.42	0.06	0.28	0.11	0.3457	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.664836	NA	NA	0.414488	0.131206	ID=COSM1131105;OCCURENCE=1(prostate)	0.268	NA	7.4929786
903	11	66103880	66103880	G	A	UTR5	RIN1	NM_004292:c.-7C>T	NA	NA	ncRNA_exonic	ENSG00000254756	NA	NA	NA	Score=358;Name=lod=38	NA	11q13.2	NA	Name=ELF1_(SC-631),TAF1,GABP,Mxi1_(bHLH),Pol2,Pol2(phosphoS2),c-Myc,HEY1,TBP,Pol2(b),FOSL2,c-Jun,Sin3Ak-20,Pol2-4H8	Name=142	NA	rs201696075	0.0009	0.0009	NA	0.000599042	0.002	NA	0.0014	NA	NA	0.0013	NA	0.0028	NA	0.0029	0.0028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.092844	2.092844	NA	0.002678	0.000455	NA	NA	NA	7.492422
903	19	14875388	14875388	G	A	exonic	EMR2	NA	nonsynonymous SNV	EMR2:NM_001271052:exon10:c.C941T:p.A314V,EMR2:NM_013447:exon11:c.C941T:p.A314V	exonic	ENSG00000127507	NA	nonsynonymous SNV	ENSG00000127507:ENST00000392964:exon6:c.C158T:p.A53V,ENSG00000127507:ENST00000595839:exon7:c.C515T:p.A172V,ENSG00000127507:ENST00000353005:exon8:c.C515T:p.A172V,ENSG00000127507:ENST00000594076:exon8:c.C662T:p.A221V,ENSG00000127507:ENST00000353876:exon9:c.C662T:p.A221V,ENSG00000127507:ENST00000392962:exon9:c.C794T:p.A265V,ENSG00000127507:ENST00000594294:exon9:c.C794T:p.A265V,ENSG00000127507:ENST00000346057:exon10:c.C794T:p.A265V,ENSG00000127507:ENST00000392965:exon10:c.C941T:p.A314V,ENSG00000127507:ENST00000596991:exon10:c.C941T:p.A314V,ENSG00000127507:ENST00000601345:exon10:c.C941T:p.A314V,ENSG00000127507:ENST00000315576:exon11:c.C941T:p.A314V,ENSG00000127507:ENST00000392967:exon11:c.C941T:p.A314V	NA	NA	19p13.12	NA	NA	NA	NA	rs35612307	0.23	0.23	0.22	0.189896	0.2813	0.1667	0.3458	0.0946	0.138	0.27	0.22	0.35	0.11	0.2651	0.35	0.18	T	0.294	B	0.085	B	.	.	1.000	P	1.385	L	1.48	T	-1.060	T	0.000	T	0.135	2.58	14.59	-3.32	-0.240	-0.787	2.223	2.579958	2.579958	0.32	0.296464	0.117393	NA	0.239	NA	7.4904694
903	7	100549967	100549967	C	T	intergenic	ACHE,MUC12	dist=56426;dist=62937	NA	NA	exonic	ENSG00000228273	NA	nonsynonymous SNV	ENSG00000228273:ENST00000379458:exon2:c.C548T:p.T183M	NA	NA	7q22.1	NA	NA	NA	NA	rs73714231	NA	NA	0.107	0.126997	0.2177	0.0278	0.1239	0.1914	0.0511	NA	NA	NA	NA	0.1254	0.087	0.01	D	.	.	.	.	.	.	.	.	0	N	.	.	-1.002	T	0.057	T	0.137	0.902	8.666	0.741	0.243	1.940	5.877	0.9016	NA	0.05	NA	NA	NA	0.08	NA	7.4902334
903	8	94808165	94808165	A	G	exonic	TMEM67	NA	nonsynonymous SNV	TMEM67:NM_153704:exon18:c.A1810G:p.I604V,TMEM67:NM_001142301:exon19:c.A1567G:p.I523V	exonic	ENSG00000164953	NA	nonsynonymous SNV	ENSG00000164953:ENST00000323130:exon18:c.A1780G:p.I594V,ENSG00000164953:ENST00000453321:exon18:c.A1810G:p.I604V,ENSG00000164953:ENST00000409623:exon19:c.A1567G:p.I523V	NA	NA	8q22.1	NA	NA	NA	NA	rs3134031	0.69	0.69	0.681	0.692891	0.6123	0.7331	0.67	0.7625	0.6564	0.61	0.72	0.67	0.8	0.6369	0.8	0.34	T	0.0	B	0.0	B	0.636	N	1.000	P	-0.755	N	-3.99	D	-0.947	T	0.000	T	0.041	0.113	4.609	0.316	-0.410	0.357	4.972	0.11323	NA	0.77	0.595	0.72911	NA	0.71	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000114244.2;CLNDSDB=.;CLNDSDBID=.	7.4891334
903	20	20033137	20033137	T	A	exonic	CRNKL1	NA	nonsynonymous SNV	CRNKL1:NM_016652:exon2:c.A333T:p.Q111H	exonic	ENSG00000101343	NA	nonsynonymous SNV	ENSG00000101343:ENST00000377327:exon2:c.A297T:p.Q99H,ENSG00000101343:ENST00000377340:exon2:c.A333T:p.Q111H,ENSG00000101343:ENST00000490910:exon2:c.A297T:p.Q99H,ENSG00000101343:ENST00000496549:exon2:c.A203T:p.K68M	NA	NA	20p11.23	NA	Name=ELF1_(SC-631),FOXA1_(SC-101058),FOXA2_(SC-6554),Max,CTCF,GABP,CTCFL_(SC-98982),TAF1,SREBP1,ETS1,TR4,HNF4A,Pol2,SP1,Mxi1_(bHLH),PU.1,SIX5,PAX5-N19,PAX5-C20,NFKB,HEY1,c-Myc,TBP,HNF4A_(H-171),FOXA1_(C-20),FOSL2,ZNF263,KAP1,Pol2-4H8,c-Fos,Sin3Ak-20	Name=148	NA	rs2255258	0.72	0.72	0.702	0.700879	0.6143	0.9375	0.755	0.6172	0.6207	0.62	0.94	0.72	0.62	0.6527	0.94	1	T	0.0	B	0.0	B	0.175	N	1.000	P	0	N	1.35	T	-0.944	T	0.000	T	0.048	0.095	4.514	-1.8	-0.422	-0.423	0.331	0.095451	NA	1	0.577674	0.616886	NA	0.667	NA	7.4886594
903	12	14018777	14018777	G	C	exonic	GRIN2B	NA	synonymous SNV	GRIN2B:NM_000834:exon2:c.C366G:p.P122P	exonic	ENSG00000150086	NA	synonymous SNV	ENSG00000150086:ENST00000279593:exon2:c.C366G:p.P122P	Score=582;Name=lod=309	NA	12p13.1	Score=946;Name=V$GATA2_01	NA	NA	NA	rs7301328	0.4	0.4	0.396	0.441494	0.3618	0.4931	0.3112	0.4955	0.4898	0.37	0.46	0.28	0.47	0.4172	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.819978	NA	NA	0.399419	0.492737	NA	0.348	CLINSIG=probable-non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000117198.2|RCV000125320.1;CLNDSDB=.|.;CLNDSDBID=.|.	7.4882476
903	3	193039597	193039597	G	A	exonic	ATP13A5	NA	synonymous SNV	ATP13A5:NM_198505:exon16:c.C1788T:p.C596C	exonic	ENSG00000187527	NA	synonymous SNV	ENSG00000187527:ENST00000342358:exon16:c.C1788T:p.C596C	Score=489;Name=lod=130	NA	3q29	Score=923;Name=V$MYB_Q6	NA	NA	NA	rs61753889	0.06	0.06	0.051	0.0670927	0.0616	NA	0.0634	0.0946	0.1074	0.05	NA	0.06	0.12	0.0606	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.15579	NA	NA	0.056395	0.090331	NA	0.101	NA	7.4880716
903	9	35870001	35870001	T	C	exonic	OR13J1	NA	nonsynonymous SNV	OR13J1:NM_001004487:exon1:c.A398G:p.H133R	exonic	ENSG00000168828	NA	nonsynonymous SNV	ENSG00000168828:ENST00000377981:exon1:c.A398G:p.H133R	NA	NA	9p13.3	Score=963;Name=V$USF_C	NA	Name=9	NA	rs7044405	0.65	0.65	0.629	0.645767	0.6193	0.6369	0.5951	0.7239	0.6125	0.6	0.64	0.64	0.75	0.6192	0.75	0.06	T	0.0	B	0.0	B	0.001	N	1.000	P	0.615	N	5.01	T	-1.097	T	0.000	T	0.012	0.472	6.564	1.76	0.143	-0.105	9.211	0.472352	NA	0.05	0.607558	0.738765	NA	0.696	NA	7.4872754
903	1	47726087	47726087	T	C	exonic	STIL	NA	nonsynonymous SNV	STIL:NM_001048166:exon16:c.A2954G:p.H985R,STIL:NM_003035:exon16:c.A2951G:p.H984R	exonic	ENSG00000123473	NA	nonsynonymous SNV	ENSG00000123473:ENST00000243182:exon16:c.A2951G:p.H984R,ENSG00000123473:ENST00000337817:exon16:c.A2951G:p.H984R,ENSG00000123473:ENST00000371877:exon16:c.A2954G:p.H985R,ENSG00000123473:ENST00000396221:exon16:c.A2900G:p.H967R,ENSG00000123473:ENST00000360380:exon17:c.A2951G:p.H984R	NA	NA	1p33	NA	NA	NA	NA	rs13376679	0.19	0.19	0.164	0.178315	0.2893	0.0298	0.2161	0.1831	0.184	0.31	0.02	0.22	0.17	0.2421	0.32	0.4	T	0.001	B	0.002	B	0.160	N	1.000	P	1.79	L	2.31	T	-0.940	T	0.000	T	0.042	-0.901	0.435	0.313	0.118	0.041	8.299	-0.901436	NA	0.38	0.315116	0.219246	NA	0.254	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000080043.1;CLNDSDB=.;CLNDSDBID=.	7.4868174
903	8	101252680	101252680	T	C	exonic	SPAG1	NA	nonsynonymous SNV	SPAG1:NM_003114:exon18:c.T2330C:p.M777T,SPAG1:NM_172218:exon18:c.T2330C:p.M777T	exonic	ENSG00000104450	NA	nonsynonymous SNV	ENSG00000104450:ENST00000251809:exon18:c.T2330C:p.M777T,ENSG00000104450:ENST00000388798:exon18:c.T2330C:p.M777T	NA	NA	8q22.2	NA	NA	NA	NA	rs6511	0.64	0.64	0.628	0.627396	0.6193	0.5327	0.7233	0.7179	0.5429	0.63	0.51	0.72	0.72	0.6179	0.72	0.89	T	0.0	B	0.0	B	0.189	N	1.000	P	-1.355	N	0.26	T	-0.994	T	0.000	T	0.003	-1.186	0.08	-3.7	-1.149	-0.164	4.563	-1.186039	NA	1	0.609419	0.692465	ID=COSM150515;OCCURENCE=1(stomach)	0.616	NA	7.4867144
903	9	121930307	121930307	G	A	exonic	DBC1	NA	synonymous SNV	DBC1:NM_014618:exon8:c.C1341T:p.C447C	exonic	ENSG00000078725	NA	synonymous SNV	ENSG00000078725:ENST00000265922:exon8:c.C1341T:p.C447C	Score=606;Name=lod=386	NA	9q33.1	NA	NA	NA	Score=80;Name=2472229.7_2_+_80	rs1043379	0.03	0.03	0.034	0.0223642	0.0656	NA	0.0447	0.003	0.0112	0.07	NA	0.05	0.0041	0.048	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.282216	NA	NA	0.066977	0.016114	NA	0.051	NA	7.4860896
903	10	115526177	115526177	A	G	exonic	PLEKHS1	NA	synonymous SNV	PLEKHS1:NM_182601:exon2:c.A18G:p.Q6Q,PLEKHS1:NM_024889:exon3:c.A36G:p.Q12Q	exonic	ENSG00000148735	NA	synonymous SNV	ENSG00000148735:ENST00000369310:exon2:c.A18G:p.Q6Q,ENSG00000148735:ENST00000361048:exon3:c.A36G:p.Q12Q	Score=565;Name=lod=264	NA	10q25.3	Score=927;Name=V$SOX5_01	NA	Name=2	NA	rs10885500	0.28	0.28	0.237	0.233227	0.4175	0.1379	0.4625	0.0234	0.2628	0.46	0.16	0.45	0.02	0.3584	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.671425	NA	NA	0.404723	0.086512	NA	0.116	NA	7.4860436
903	8	145806262	145806262	C	T	exonic	ARHGAP39	NA	synonymous SNV	ARHGAP39:NM_025251:exon4:c.G480A:p.A160A	exonic	ENSG00000147799	NA	synonymous SNV	ENSG00000147799:ENST00000276826:exon2:c.G480A:p.A160A,ENSG00000147799:ENST00000377307:exon2:c.G480A:p.A160A,ENSG00000147799:ENST00000540274:exon3:c.G480A:p.A160A	NA	NA	8q24.3	NA	Name=Pol2,TAF1,TBP,ZEB1_(SC-25388)	Name=5	NA	rs117042905	0.04	0.04	0.036	0.0227636	0.0736	0.001	0.0375	0.0023	0.0102	0.07	NA	0.05	0.02	0.0498	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.895754	NA	NA	0.05787	0.008588	ID=COSM454239;OCCURENCE=1(breast)	NA	NA	7.4853966
903	2	98844674	98844674	C	G	exonic	VWA3B	NA	nonsynonymous SNV	VWA3B:NM_144992:exon15:c.C2029G:p.L677V	exonic	ENSG00000168658	NA	nonsynonymous SNV	ENSG00000168658:ENST00000477737:exon15:c.C2029G:p.L677V	NA	NA	2q11.2	NA	NA	NA	NA	rs7601049	0.64	0.64	0.668	0.689097	0.6034	0.7986	0.5331	0.6346	0.8487	0.59	0.77	0.55	0.64	0.632	0.77	0.85	T	0.319	B	0.041	B	0.901	N	0.998	P	0.77	N	3.4	T	-0.975	T	0.000	T	0.125	1.029	9.203	-5.07	-0.468	-1.794	3.045	1.029089	NA	0.69	0.612579	0.63812	NA	0.565	NA	7.4853544
904	18	9944956	9944956	T	C	exonic	VAPA	NA	synonymous SNV	VAPA:NM_003574:exon5:c.T453C:p.T151T	exonic	ENSG00000101558	NA	synonymous SNV	ENSG00000101558:ENST00000340541:exon5:c.T453C:p.T151T	NA	NA	18p11.22	NA	Name=FOXA2_(SC-6554),CEBPB	Name=6	NA	rs29133	0.08	0.08	0.074	0.0842652	0.0537	0.0774	0.1052	0.1263	0.0511	0.06	0.07	0.07	0.15	0.0745	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.096928	NA	NA	0.053601	0.1275	NA	0.065	NA	7.4848656
904	12	52709883	52709883	T	C	exonic	KRT83	NA	synonymous SNV	KRT83:NM_002282:exon7:c.A1056G:p.E352E	exonic	ENSG00000170523	NA	synonymous SNV	ENSG00000170523:ENST00000293670:exon7:c.A1056G:p.E352E	Score=448;Name=lod=88	NA	12q13.13	Score=832;Name=V$ER_Q6	Name=CTCF	NA	NA	rs2248473	0.36	0.36	0.275	0.375799	0.4095	0.1885	0.317	0.5008	0.407	0.4	0.19	0.33	0.51	0.3784	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.453406	NA	NA	0.394419	0.472991	ID=COSM147521;OCCURENCE=1(stomach)	0.42	NA	7.4843476
904	12	11339020	11339020	T	A	exonic	TAS2R42	NA	nonsynonymous SNV	TAS2R42:NM_181429:exon1:c.A524T:p.Y175F	exonic	ENSG00000186136	NA	nonsynonymous SNV	ENSG00000186136:ENST00000334266:exon1:c.A524T:p.Y175F	NA	NA	12p13.2	NA	NA	NA	NA	rs35969491	0.57	0.57	0.53	0.540735	0.6521	0.7569	0.6167	0.1596	0.6646	0.65	0.74	0.64	0.18	0.6024	0.74	0.07	T	0.997	D	0.978	D	0.568	U	1.000	P	0.205	N	1.2	T	-0.976	T	0.000	T	0.07	1.878	12.24	1.48	0.451	0.328	4.451	1.877526	1.877526	0.09	0.595009	0.214451	NA	0.457	NA	7.4838244
904	2	170062078	170062078	G	C	exonic	LRP2	NA	synonymous SNV	LRP2:NM_004525:exon41:c.C7626G:p.R2542R	exonic	ENSG00000081479	NA	synonymous SNV	ENSG00000081479:ENST00000263816:exon41:c.C7626G:p.R2542R	NA	NA	2q31.1	Score=834;Name=V$NFKB_Q6	NA	NA	NA	rs13397109	0.1	0.1	0.105	0.136382	0.0547	NA	0.0576	0.3563	0.1196	0.05	NA	0.06	0.33	0.0764	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.033891	NA	NA	0.05186	0.305266	NA	0.145	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117544.2;CLNDSDB=.;CLNDSDBID=.	7.4837066
904	4	106604364	106604364	A	G	exonic	INTS12	NA	synonymous SNV	INTS12:NM_001142471:exon7:c.T915C:p.P305P,INTS12:NM_020395:exon8:c.T915C:p.P305P	exonic	ENSG00000138785	NA	synonymous SNV	ENSG00000138785:ENST00000451321:exon7:c.T915C:p.P305P,ENSG00000138785:ENST00000340139:exon8:c.T915C:p.P305P,ENSG00000138785:ENST00000394735:exon8:c.T915C:p.P305P	NA	NA	4q24	NA	Name=p300,FOXA1_(C-20)	Name=28	NA	rs34072732	0.04	0.04	0.036	0.0321486	0.0636	NA	0.0591	0.0272	0.0204	0.07	NA	0.07	0.02	0.0516	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.19646	NA	NA	0.068256	0.037449	NA	0.022	NA	7.4832106
904	13	103328660	103328660	A	G	exonic	TPP2	NA	synonymous SNV	TPP2:NM_003291:exon28:c.A3555G:p.A1185A	exonic	ENSG00000134900	NA	synonymous SNV	ENSG00000134900:ENST00000376065:exon28:c.A3555G:p.A1185A,ENSG00000134900:ENST00000376052:exon29:c.A3594G:p.A1198A	Score=671;Name=lod=708	NA	13q33.1	Score=879;Name=V$OCT1_07	NA	NA	NA	rs2230856	0.11	0.11	0.103	0.116813	0.0567	0.1349	0.0591	0.1921	0.0992	0.06	0.13	0.06	0.21	0.0802	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.054038	NA	NA	0.047269	0.170005	NA	0.13	NA	7.4824976
904	12	9346792	9346792	G	C	exonic	PZP	NA	nonsynonymous SNV	PZP:NM_002864:exon11:c.C1135G:p.L379V	exonic	ENSG00000126838	NA	nonsynonymous SNV	ENSG00000126838:ENST00000381997:exon8:c.C742G:p.L248V,ENSG00000126838:ENST00000261336:exon11:c.C1135G:p.L379V	NA	NA	12p13.31	NA	NA	NA	NA	rs12230214	0.3	0.3	0.295	0.277756	0.3072	0.3819	0.232	0.1876	0.2945	0.29	0.38	0.28	0.24	0.2646	0.38	0.47	T	0.041	B	0.032	B	0.660	U	1.000	P	0.235	N	1.56	T	-0.932	T	0.000	T	0.015	-0.809	0.653	0.366	-0.038	-0.997	2.442	-0.808602	NA	0.48	0.27907	0.181344	NA	0.341	NA	7.4824634
904	17	1542190	1542190	G	A	exonic	SCARF1	NA	nonsynonymous SNV	SCARF1:NM_003693:exon8:c.C1274T:p.A425V,SCARF1:NM_145350:exon8:c.C1274T:p.A425V	exonic	ENSG00000074660	NA	nonsynonymous SNV	ENSG00000074660:ENST00000348987:exon6:c.C1016T:p.A339V,ENSG00000074660:ENST00000263071:exon8:c.C1274T:p.A425V,ENSG00000074660:ENST00000571272:exon8:c.C1274T:p.A425V	NA	NA	17p13.3	NA	NA	NA	NA	rs2272011	0.68	0.68	0.648	0.666733	0.6133	0.878	0.6916	0.5197	0.6851	0.61	0.89	0.68	0.55	0.6402	0.89	0.25	T	0.1	B	0.019	B	0.177	N	1.000	P	1.7	L	1.07	T	-1.034	T	0.000	T	0.129	1.86	12.18	-3.51	-1.023	-0.070	8.882	1.859897	1.859897	0.34	0.597674	0.534952	ID=COSM436062;OCCURENCE=1(breast),1(large_intestine)	0.42	NA	7.4821594
904	4	110790911	110790911	A	T	exonic	LRIT3	NA	nonsynonymous SNV	LRIT3:NM_198506:exon4:c.A1006T:p.M336L	exonic	ENSG00000183423	NA	nonsynonymous SNV	ENSG00000183423:ENST00000379920:exon3:c.A871T:p.M291L,ENSG00000183423:ENST00000409621:exon3:c.A457T:p.M153L,ENSG00000183423:ENST00000327908:exon4:c.A457T:p.M153L,ENSG00000183423:ENST00000594814:exon4:c.A1006T:p.M336L	NA	NA	4q25	NA	NA	NA	NA	rs764205	0.51	0.51	0.529	0.469649	0.6392	0.4901	0.3963	0.3911	0.4325	0.63	0.49	0.45	0.38	0.5669	0.65	0.3	T	0.375	B	0.097	B	0.516	N	1.000	P	0.945	L	-0.2	T	-0.918	T	0.000	T	0.157	2.145	13.13	3.12	0.404	2.364	8.129	2.144734	2.144734	0.3	0.646628	0.433046	ID=COSM1131303,COSM1131304;OCCURENCE=1(prostate)	0.391	NA	7.4806054
904	2	159166069	159166069	T	C	exonic	CCDC148	NA	nonsynonymous SNV	CCDC148:NM_001171637:exon7:c.A728G:p.K243R,CCDC148:NM_138803:exon9:c.A986G:p.K329R	exonic	ENSG00000153237	NA	nonsynonymous SNV	ENSG00000153237:ENST00000536771:exon7:c.A728G:p.K243R,ENSG00000153237:ENST00000283233:exon9:c.A986G:p.K329R,ENSG00000153237:ENST00000409187:exon10:c.A1013G:p.K338R	Score=448;Name=lod=88	NA	2q24.1	NA	NA	NA	NA	rs7559772	0.95	0.95	0.963	0.955871	0.9453	0.998	0.9438	0.9266	0.9714	0.95	1	0.92	0.93	0.9556	1	1	T	0.0	B	0.003	B	.	.	0.000	P	-2.28	N	2.15	T	-0.955	T	0.000	T	0.06	-1.797	0.01	3.84	0.444	2.016	13.444	-1.797078	NA	1	0.953256	0.934862	NA	0.906	NA	7.4791774
904	1	38227086	38227086	A	T	exonic	EPHA10	NA	nonsynonymous SNV	EPHA10:NM_001099439:exon3:c.T841A:p.F281I,EPHA10:NM_173641:exon3:c.T841A:p.F281I	exonic	ENSG00000183317	NA	nonsynonymous SNV	ENSG00000183317:ENST00000319637:exon3:c.T841A:p.F281I,ENSG00000183317:ENST00000373048:exon3:c.T841A:p.F281I,ENSG00000183317:ENST00000427468:exon3:c.T841A:p.F281I	Score=417;Name=lod=66	NA	1p34.3	NA	NA	NA	NA	rs4653328	0.36	0.36	0.343	0.353235	0.2833	0.4831	0.3012	0.4402	0.2106	0.3	0.44	0.27	0.42	0.3015	0.44	0.34	T	0.003	B	0.001	B	0.889	N	0.000	P	-0.895	N	4.58	T	-1.011	T	0.000	T	0.047	0.754	7.996	-1.55	-0.327	-0.342	3.998	0.754258	NA	0.36	0.271671	0.395824	NA	0.464	NA	7.4768624
905	7	154684153	154684153	T	C	exonic	DPP6	NA	nonsynonymous SNV	DPP6:NM_001039350:exon26:c.T2369C:p.L790P,DPP6:NM_001936:exon26:c.T2375C:p.L792P,DPP6:NM_130797:exon26:c.T2561C:p.L854P	exonic	ENSG00000130226	NA	nonsynonymous SNV	ENSG00000130226:ENST00000427557:exon24:c.T2240C:p.L747P,ENSG00000130226:ENST00000332007:exon26:c.T2375C:p.L792P,ENSG00000130226:ENST00000377770:exon26:c.T2561C:p.L854P,ENSG00000130226:ENST00000404039:exon26:c.T2369C:p.L790P	NA	NA	7q36.2	NA	NA	NA	NA	rs3734960	0.33	0.33	0.309	0.35603	0.2644	0.2738	0.4611	0.5234	0.2342	0.25	0.26	0.41	0.49	0.3208	0.5	0.07	T	0.0	B	0.0	B	0.078	N	1.000	P	-1.155	N	2.46	T	-0.953	T	0.000	T	0.106	-0.13	3.365	2.86	0.095	0.182	9.981	-0.129586	NA	0.05	0.274175	0.496253	NA	0.312	NA	7.4739584
905	1	44686322	44686322	T	C	UTR3	DMAP1	NM_001034024:c.*32T>C,NM_001034023:c.*32T>C,NM_019100:c.*32T>C	NA	NA	UTR3	ENSG00000178028	ENST00000361745:c.*32T>C,ENST00000315913:c.*32T>C,ENST00000372289:c.*32T>C	NA	NA	Score=340;Name=lod=32	NA	1p34.1	Score=816;Name=V$FREAC3_01	Name=CTCF	Name=63	NA	rs12419	0.25	0.25	0.247	0.274161	0.2584	0.2371	0.3357	0.1876	0.4018	0.26	0.22	0.31	0.21	0.3022	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.49709	NA	NA	0.298953	0.204267	NA	0.304	NA	7.4737804
905	19	38189440	38189440	T	C	exonic	ZNF607	NA	nonsynonymous SNV	ZNF607:NM_001172677:exon5:c.A1589G:p.K530R,ZNF607:NM_032689:exon5:c.A1592G:p.K531R	exonic	ENSG00000198182	NA	nonsynonymous SNV	ENSG00000198182:ENST00000355202:exon5:c.A1592G:p.K531R,ENSG00000198182:ENST00000395835:exon5:c.A1589G:p.K530R	Score=422;Name=lod=69	NA	19q13.12	NA	NA	NA	NA	rs958305	0.6	0.6	0.6	0.580871	0.831	0.3006	0.6715	0.528	0.6196	0.83	0.3	0.69	0.54	0.715	0.83	0.06	T	0.997	D	0.907	P	.	.	0.992	P	-0.045	N	1.83	T	-1.004	T	0.000	T	0.062	3.621	18.42	1.19	0.127	0.118	6.251	3.620744	3.620744	0.02	0.814186	0.570132	NA	0.667	NA	7.4731474
905	4	187120211	187120211	C	A	exonic	CYP4V2	NA	nonsynonymous SNV	CYP4V2:NM_207352:exon6:c.C775A:p.Q259K	exonic	ENSG00000145476	NA	nonsynonymous SNV	ENSG00000145476:ENST00000378802:exon6:c.C775A:p.Q259K	Score=374;Name=lod=44	NA	4q35.2	NA	NA	NA	NA	rs13146272	0.55	0.55	0.538	0.559305	0.6451	0.4127	0.4741	0.6014	0.6258	0.66	0.37	0.51	0.6	0.5852	0.66	1	T	0.0	B	0.001	B	0.000	N	1.000	P	-1.64	N	-0.18	T	-0.942	T	0.000	T	0.019	-0.486	1.765	0.977	-0.202	2.241	5.992	-0.485771	NA	1	0.630465	0.623922	NA	0.543	NA	7.4725684
905	16	88781073	88781073	G	A	exonic	CTU2	NA	nonsynonymous SNV	CTU2:NM_001012759:exon12:c.G1280A:p.R427Q,CTU2:NM_001012762:exon12:c.G1280A:p.R427Q	exonic	ENSG00000174177	NA	nonsynonymous SNV	ENSG00000174177:ENST00000378384:exon11:c.G1019A:p.R340Q,ENSG00000174177:ENST00000312060:exon12:c.G1280A:p.R427Q,ENSG00000174177:ENST00000453996:exon12:c.G1280A:p.R427Q,ENSG00000174177:ENST00000567949:exon12:c.G1493A:p.R498Q	NA	NA	16q24.3	NA	NA	NA	NA	rs11549835	0.07	0.07	0.071	0.0397364	0.1292	NA	0.0375	0.0234	0.0123	0.15	NA	0.04	0.03	0.0993	0.15	0.55	T	0.661	P	0.056	B	0.994	N	1.000	P	0.345	N	2.59	T	-0.978	T	0.000	T	0.144	-0.001	4.011	0.244	-0.031	0.029	4.280	-0.000621	NA	0.32	0.135718	0.03524	NA	0.036	NA	7.4691154
905	15	83680287	83680287	A	G	exonic	C15orf40	NA	nonsynonymous SNV	C15orf40:NM_001160113:exon1:c.T73C:p.C25R,C15orf40:NM_001160114:exon1:c.T73C:p.C25R,C15orf40:NM_001160115:exon1:c.T73C:p.C25R,C15orf40:NM_001160116:exon1:c.T73C:p.C25R,C15orf40:NM_144597:exon1:c.T73C:p.C25R	exonic	ENSG00000169609	NA	nonsynonymous SNV	ENSG00000169609:ENST00000451195:exon1:c.T73C:p.C25R,ENSG00000169609:ENST00000510873:exon1:c.T70C:p.C24R,ENSG00000169609:ENST00000513601:exon1:c.T73C:p.C25R,ENSG00000169609:ENST00000538348:exon1:c.T73C:p.C25R,ENSG00000169609:ENST00000565712:exon1:c.T73C:p.C25R	NA	NA	15q25.2	NA	Name=YY1_(C-20),Pol2(phosphoS2),Pol2,GABP,HMGN3,BAF155,Pol2-4H8,HA-E2F1,IRF1,TBP,HEY1	NA	NA	rs4842860	0.67	0.67	0.65	0.623403	0.6183	0.6905	0.7536	0.7065	0.3548	0.62	0.69	0.72	0.68	0.6181	0.72	0.17	T	0.0	B	0.0	B	.	.	1.000	P	0	N	.	.	-0.995	T	0.000	T	0.444	0.675	7.612	-1.95	-1.096	0.347	3.599	0.675107	NA	NA	0.628605	0.699501	NA	0.732	NA	7.4683284
905	12	2760898	2760898	C	T	exonic	CACNA1C	NA	synonymous SNV	CACNA1C:NM_001129837:exon31:c.C4005T:p.I1335I,CACNA1C:NM_001129838:exon31:c.C4005T:p.I1335I,CACNA1C:NM_001129839:exon31:c.C3999T:p.I1333I,CACNA1C:NM_001129846:exon31:c.C4005T:p.I1335I,CACNA1C:NM_001167625:exon31:c.C4005T:p.I1335I,CACNA1C:NM_000719:exon32:c.C4038T:p.I1346I,CACNA1C:NM_001129829:exon32:c.C4104T:p.I1368I,CACNA1C:NM_001129830:exon32:c.C4038T:p.I1346I,CACNA1C:NM_001129833:exon32:c.C4038T:p.I1346I,CACNA1C:NM_001129834:exon32:c.C4038T:p.I1346I,CACNA1C:NM_001129835:exon32:c.C4038T:p.I1346I,CACNA1C:NM_001129836:exon32:c.C4089T:p.I1363I,CACNA1C:NM_001129840:exon32:c.C4038T:p.I1346I,CACNA1C:NM_001129841:exon32:c.C4038T:p.I1346I,CACNA1C:NM_001129842:exon32:c.C4038T:p.I1346I,CACNA1C:NM_001129843:exon32:c.C4038T:p.I1346I,CACNA1C:NM_001129844:exon32:c.C4029T:p.I1343I,CACNA1C:NM_001167623:exon32:c.C4038T:p.I1346I,CACNA1C:NM_001167624:exon32:c.C4038T:p.I1346I,CACNA1C:NM_001129831:exon33:c.C4122T:p.I1374I,CACNA1C:NM_001129832:exon33:c.C4098T:p.I1366I,CACNA1C:NM_001129827:exon34:c.C4182T:p.I1394I,CACNA1C:NM_199460:exon34:c.C4182T:p.I1394I	exonic	ENSG00000151067	NA	synonymous SNV	ENSG00000151067:ENST00000399591:exon31:c.C4005T:p.I1335I,ENSG00000151067:ENST00000399595:exon31:c.C4005T:p.I1335I,ENSG00000151067:ENST00000399649:exon31:c.C3999T:p.I1333I,ENSG00000151067:ENST00000327702:exon32:c.C4038T:p.I1346I,ENSG00000151067:ENST00000344100:exon32:c.C4104T:p.I1368I,ENSG00000151067:ENST00000399597:exon32:c.C4038T:p.I1346I,ENSG00000151067:ENST00000399601:exon32:c.C4038T:p.I1346I,ENSG00000151067:ENST00000399603:exon32:c.C4038T:p.I1346I,ENSG00000151067:ENST00000399617:exon32:c.C4038T:p.I1346I,ENSG00000151067:ENST00000399621:exon32:c.C4038T:p.I1346I,ENSG00000151067:ENST00000399629:exon32:c.C4089T:p.I1363I,ENSG00000151067:ENST00000399634:exon32:c.C4038T:p.I1346I,ENSG00000151067:ENST00000399637:exon32:c.C4038T:p.I1346I,ENSG00000151067:ENST00000399641:exon32:c.C4038T:p.I1346I,ENSG00000151067:ENST00000399644:exon32:c.C4038T:p.I1346I,ENSG00000151067:ENST00000399655:exon32:c.C4038T:p.I1346I,ENSG00000151067:ENST00000402845:exon32:c.C4038T:p.I1346I,ENSG00000151067:ENST00000406454:exon32:c.C4038T:p.I1346I,ENSG00000151067:ENST00000335762:exon33:c.C4113T:p.I1371I,ENSG00000151067:ENST00000399606:exon33:c.C4098T:p.I1366I,ENSG00000151067:ENST00000399638:exon33:c.C4122T:p.I1374I,ENSG00000151067:ENST00000347598:exon34:c.C4182T:p.I1394I	Score=498;Name=lod=141	NA	12p13.33	Score=837;Name=V$CHOP_01	NA	NA	NA	rs56180838	0.03	0.03	0.024	0.023762	0.0825	NA	0.0389	0.003	0.0051	0.08	NA	0.03	0.0041	0.0489	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.508352	1.508352	NA	0.067341	0.014318	NA	0.036	NA	7.4679256
905	1	118624123	118624123	C	T	exonic	SPAG17	NA	synonymous SNV	SPAG17:NM_206996:exon14:c.G1905A:p.P635P	exonic	ENSG00000155761	NA	synonymous SNV	ENSG00000155761:ENST00000336338:exon14:c.G1905A:p.P635P	NA	NA	1p12	NA	Name=GATA3_(SC-268),ERalpha_a,FOXA1_(C-20),p300	Name=7	NA	rs2298176	0.1	0.1	0.112	0.126398	0.0596	0.2877	0.0447	0.053	0.1861	0.06	0.24	0.04	0.06	0.0826	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.72791	NA	NA	0.05686	0.058557	NA	0.029	NA	7.4676066
905	16	2114407	2114407	C	T	exonic	TSC2	NA	synonymous SNV	TSC2:NM_000548:exon15:c.C1578T:p.S526S,TSC2:NM_001077183:exon15:c.C1578T:p.S526S,TSC2:NM_001114382:exon15:c.C1578T:p.S526S	exonic	ENSG00000103197	NA	synonymous SNV	ENSG00000103197:ENST00000382538:exon14:c.C1431T:p.S477S,ENSG00000103197:ENST00000439673:exon14:c.C1467T:p.S489S,ENSG00000103197:ENST00000219476:exon15:c.C1578T:p.S526S,ENSG00000103197:ENST00000350773:exon15:c.C1578T:p.S526S,ENSG00000103197:ENST00000353929:exon15:c.C1578T:p.S526S,ENSG00000103197:ENST00000401874:exon15:c.C1578T:p.S526S,ENSG00000103197:ENST00000568454:exon15:c.C1611T:p.S537S	Score=552;Name=lod=233	NA	16p13.3	NA	NA	NA	NA	rs34012042	0.04	0.04	0.031	0.0351438	0.0726	NA	0.0461	0.0023	0.0695	0.07	NA	0.07	0.0041	0.0573	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.194198	NA	NA	0.069767	0.015241	NA	0.022	CLINSIG=untested|untested|untested|untested|probable-non-pathogenic|non-pathogenic;CLNDBN=Tuberous_sclerosis_syndrome|Lymphangiomyomatosis|Lymphangiomyomatosis|Tuberous_sclerosis_syndrome|not_specified|not_provided;CLNREVSTAT=not|not|not|not|single|single;CLNACC=RCV000042418.2|RCV000055219.1|RCV000055357.1|RCV000055357.1|RCV000118700.2|RCV000125651.1;CLNDSDB=GeneReviews:MedGen:OMIM:SNOMED_CT|MedGen:OMIM:Orphanet:SNOMED_CT|MedGen:OMIM:Orphanet:SNOMED_CT|GeneReviews:MedGen:OMIM:SNOMED_CT|.|.;CLNDSDBID=NBK1220:C0041341:191100:7199000|C0751674:606690:ORPHA538:73017001|C0751674:606690:ORPHA538:73017001|NBK1220:C0041341:191100:7199000|.|.	7.4669996
905	10	28378613	28378613	G	A	exonic	MPP7	NA	synonymous SNV	MPP7:NM_173496:exon14:c.C1110T:p.L370L	exonic	ENSG00000150054	NA	synonymous SNV	ENSG00000150054:ENST00000441595:exon7:c.C393T:p.L131L,ENSG00000150054:ENST00000445954:exon11:c.C735T:p.L245L,ENSG00000150054:ENST00000496637:exon11:c.C1110T:p.L370L,ENSG00000150054:ENST00000540098:exon11:c.C1110T:p.L370L,ENSG00000150054:ENST00000375732:exon12:c.C1110T:p.L370L,ENSG00000150054:ENST00000337532:exon13:c.C1110T:p.L370L,ENSG00000150054:ENST00000375719:exon14:c.C1110T:p.L370L	NA	NA	10p12.1	NA	Name=p300_(N-15),STAT3,Pol2-4H8,c-Fos,c-Jun	Name=97	NA	rs11006853	0.14	0.14	0.127	0.152556	0.0477	0.253	0.1268	0.1717	0.1493	0.05	0.26	0.13	0.14	0.0961	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.720788	NA	NA	0.05593	0.166137	ID=COSM146915;OCCURENCE=1(stomach)	0.08	NA	7.4669366
905	1	152323132	152323132	G	T	exonic	FLG2	NA	stopgain	FLG2:NM_001014342:exon3:c.C7130A:p.S2377X	exonic	ENSG00000143520	NA	stopgain	ENSG00000143520:ENST00000388718:exon3:c.C7130A:p.S2377X	NA	NA	1q21.3	NA	NA	NA	NA	rs12568784	0.3	0.3	0.287	0.316893	0.1421	0.4554	0.4049	0.2905	0.3272	0.14	0.49	0.34	0.29	0.2323	0.49	0.81	T	.	.	.	.	.	.	0.971	P	.	.	.	.	.	.	.	.	.	11.362	45	0.129	-0.057	0.411	2.590	11.361751	11.361751	0	0.15907	0.260554	NA	0.275	NA	7.46653
905	19	57956828	57956828	T	G	exonic	ZNF749	NA	nonsynonymous SNV	ZNF749:NM_001023561:exon3:c.T2312G:p.I771R	exonic	ENSG00000186230	NA	nonsynonymous SNV	ENSG00000186230:ENST00000334181:exon3:c.T2312G:p.I771R	Score=321;Name=lod=27	NA	19q13.43	NA	NA	NA	NA	rs7246856	0.69	0.69	0.697	0.707268	0.5964	0.7232	0.683	0.7322	0.7883	0.6	0.78	0.63	0.76	0.6691	0.78	1	T	0.0	B	0.0	B	.	.	0.784	P	-1.37	N	5.0	T	-1.048	T	0.000	T	0.084	-1.533	0.016	1.52	0.205	-6.581	3.475	-1.533291	NA	1	0.601443	0.710132	NA	0.688	NA	7.4663904
905	12	86198594	86198594	A	G	exonic	RASSF9	NA	synonymous SNV	RASSF9:NM_005447:exon2:c.T1194C:p.T398T	exonic	ENSG00000198774	NA	synonymous SNV	ENSG00000198774:ENST00000361228:exon2:c.T1194C:p.T398T	Score=284;Name=lod=19	NA	12q21.31	NA	NA	Name=74	NA	rs11831336	0.06	0.06	0.043	0.0433307	0.0656	0.0466	0.0922	0.0265	0.0051	0.06	0.05	0.08	0.03	0.0605	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.266237	NA	NA	0.074288	0.036674	NA	0.072	NA	7.4662786
905	3	6903297	6903297	C	T	exonic	GRM7	NA	synonymous SNV	GRM7:NM_000844:exon1:c.C222T:p.N74N,GRM7:NM_181874:exon1:c.C222T:p.N74N	exonic	ENSG00000196277	NA	synonymous SNV	ENSG00000196277:ENST00000357716:exon1:c.C222T:p.N74N,ENSG00000196277:ENST00000389335:exon1:c.C222T:p.N74N,ENSG00000196277:ENST00000389336:exon1:c.C222T:p.N74N,ENSG00000196277:ENST00000402647:exon1:c.C222T:p.N74N,ENSG00000196277:ENST00000403881:exon1:c.C222T:p.N74N,ENSG00000196277:ENST00000440923:exon1:c.C222T:p.N74N,ENSG00000196277:ENST00000467425:exon1:c.C222T:p.N74N,ENSG00000196277:ENST00000486284:exon1:c.C222T:p.N74N	Score=765;Name=lod=1714	Name=Panic disorder	3p26.1	NA	NA	Name=3	NA	rs3749380	0.38	0.38	0.372	0.416933	0.4066	0.3214	0.4496	0.3593	0.5808	0.39	0.35	0.43	0.36	0.4178	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.706005	NA	NA	0.376279	0.324784	ID=COSM1425181;OCCURENCE=1(large_intestine)	0.478	NA	7.4659876
905	17	16527357	16527357	G	A	exonic	ZNF624	NA	synonymous SNV	ZNF624:NM_020787:exon6:c.C843T:p.C281C	exonic	ENSG00000197566	NA	synonymous SNV	ENSG00000197566:ENST00000311331:exon6:c.C843T:p.C281C	Score=366;Name=lod=41	NA	17p11.2	NA	Name=ZNF274	NA	NA	rs62072859	0.04	0.04	0.031	0.0301518	0.0845	NA	0.0432	0.0121	0.0204	0.08	NA	0.05	0.01	0.0494	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.867054	NA	NA	0.067093	0.019545	NA	0.007	NA	7.4656736
905	9	38396502	38396502	G	A	exonic	ALDH1B1	NA	nonsynonymous SNV	ALDH1B1:NM_000692:exon2:c.G757A:p.V253M	exonic	ENSG00000137124	NA	nonsynonymous SNV	ENSG00000137124:ENST00000377698:exon2:c.G757A:p.V253M	Score=385;Name=lod=49	NA	9p13.2	Score=901;Name=V$MYCMAX_02	NA	NA	NA	rs4878199	0.93	0.93	0.927	0.938498	0.9602	1	0.9568	0.8283	0.9888	0.95	1	0.94	0.8	0.9539	1	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-1.845	N	2.42	T	-1.014	T	0.000	T	0.036	-2.553	0.003	0.413	-0.448	2.723	4.952	-2.552642	NA	1	0.953837	0.85951	NA	0.92	NA	7.4653964
906	4	113352899	113352899	G	A	exonic	ALPK1	NA	nonsynonymous SNV	ALPK1:NM_001253884:exon10:c.G1962A:p.M654I,ALPK1:NM_001102406:exon11:c.G2196A:p.M732I,ALPK1:NM_025144:exon11:c.G2196A:p.M732I	exonic	ENSG00000073331	NA	nonsynonymous SNV	ENSG00000073331:ENST00000504176:exon10:c.G1962A:p.M654I,ENSG00000073331:ENST00000177648:exon11:c.G2196A:p.M732I,ENSG00000073331:ENST00000458497:exon11:c.G2196A:p.M732I	NA	NA	4q25	NA	NA	NA	NA	rs2074379	0.64	0.64	0.651	0.626797	0.6173	0.6359	0.5576	0.7224	0.547	0.63	0.66	0.55	0.7	0.6225	0.7	0.92	T	0.0	B	0.002	B	0.769	N	1.000	P	0.29	N	4.48	T	-1.057	T	0.000	T	0.065	0.382	6.077	3.31	1.141	0.648	10.926	0.382466	NA	0.45	0.630233	0.699728	NA	0.609	NA	7.4633004
906	1	118537074	118537074	A	G	exonic	SPAG17	NA	synonymous SNV	SPAG17:NM_206996:exon35:c.T5133C:p.P1711P	exonic	ENSG00000155761	NA	synonymous SNV	ENSG00000155761:ENST00000437255:exon5:c.T573C:p.P191P,ENSG00000155761:ENST00000336338:exon35:c.T5133C:p.P1711P	Score=393;Name=lod=53	NA	1p12	Score=839;Name=V$PPARG_03	NA	NA	NA	rs12031260	0.11	0.11	0.092	0.128395	0.0616	0.3204	0.0418	0.034	0.1881	0.06	0.29	0.04	0.03	0.0851	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.640948	NA	NA	0.057106	0.041307	NA	0.036	NA	7.4628606
906	5	77425099	77425099	G	A	exonic	AP3B1	NA	synonymous SNV	AP3B1:NM_001271769:exon16:c.C1536T:p.L512L,AP3B1:NM_003664:exon16:c.C1683T:p.L561L	exonic	ENSG00000132842	NA	synonymous SNV	ENSG00000132842:ENST00000255194:exon16:c.C1683T:p.L561L,ENSG00000132842:ENST00000519295:exon16:c.C1536T:p.L512L	Score=884;Name=lod=5203	NA	5q14.1	Score=845;Name=V$GFI1_01	NA	NA	NA	rs17192146	0.04	0.04	0.042	0.0341454	0.0825	NA	0.0403	0.0015	0.0593	0.09	NA	0.05	0.002	0.0543	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.166252	NA	NA	0.068256	0.013164	NA	0.029	NA	7.4616106
906	1	16332571	16332571	C	T	exonic	C1orf64	NA	synonymous SNV	C1orf64:NM_178840:exon2:c.C240T:p.T80T	exonic	ENSG00000183888	NA	synonymous SNV	ENSG00000183888:ENST00000329454:exon2:c.C240T:p.T80T	Score=352;Name=lod=36	NA	1p36.13	Score=822;Name=V$PAX4_01	NA	NA	NA	rs1763612	0.07	0.07	0.059	0.0840655	0.0736	0.0823	0.0576	0.0514	0.1595	0.07	0.05	0.05	0.09	0.074	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.440503	NA	NA	0.058953	0.059464	NA	0.051	NA	7.4601136
906	4	25417109	25417109	T	A	exonic	ANAPC4	NA	synonymous SNV	ANAPC4:NM_013367:exon26:c.T1848A:p.I616I	exonic	ENSG00000053900	NA	synonymous SNV	ENSG00000053900:ENST00000315368:exon26:c.T1848A:p.I616I,ENSG00000053900:ENST00000510092:exon26:c.T1851A:p.I617I	Score=349;Name=lod=35	NA	4p15.2	Score=875;Name=V$S8_01	NA	NA	NA	rs3214035	0.08	0.08	0.071	0.0810703	0.0666	0.1141	0.1009	0.0053	0.1503	0.07	0.14	0.09	0.01	0.0729	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.689446	NA	NA	0.067674	0.013391	NA	0.101	NA	7.4594926
906	6	44275011	44275011	T	C	exonic	AARS2	NA	nonsynonymous SNV	AARS2:NM_020745:exon6:c.A1015G:p.I339V	exonic	ENSG00000124608	NA	nonsynonymous SNV	ENSG00000124608:ENST00000244571:exon6:c.A1015G:p.I339V	Score=304;Name=lod=23	NA	6p21.1	NA	NA	NA	NA	rs324136	0.91	0.91	0.891	0.888978	0.9612	0.998	0.9524	0.6732	0.9489	0.96	1	0.95	0.7	0.9469	1	0.3	T	0.0	B	0.0	B	0.007	N	0.000	P	-1.245	N	-0.43	T	-1.086	T	0.033	T	0.057	-0.595	1.336	2.88	0.396	1.993	9.255	-0.595453	NA	0.37	0.96593	0.731729	NA	0.877	NA	7.4593034
906	17	2595964	2595964	G	A	exonic	CLUH	NA	synonymous SNV	CLUH:NM_015229:exon21:c.C3222T:p.A1074A	exonic	ENSG00000132361	NA	synonymous SNV	ENSG00000132361:ENST00000575014:exon19:c.C3021T:p.A1007A,ENSG00000132361:ENST00000538975:exon20:c.C3222T:p.A1074A,ENSG00000132361:ENST00000435359:exon21:c.C3222T:p.A1074A,ENSG00000132361:ENST00000570628:exon21:c.C3222T:p.A1074A	Score=475;Name=lod=114	NA	17p13.3	NA	Name=Pol2	Name=4	NA	rs2302199	0.46	0.46	0.439	0.457468	0.4235	0.501	0.3689	0.5219	0.4233	0.41	0.5	0.39	0.53	0.419	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.36928	1.36928	NA	0.367911	0.508994	ID=COSM436208,COSM436207;OCCURENCE=1(breast)	0.507	NA	7.4562556
906	4	7844953	7844953	G	A	exonic	AFAP1	NA	synonymous SNV	AFAP1:NM_001134647:exon5:c.C459T:p.D153D,AFAP1:NM_198595:exon5:c.C459T:p.D153D	exonic	ENSG00000196526	NA	synonymous SNV	ENSG00000196526:ENST00000360265:exon4:c.C459T:p.D153D,ENSG00000196526:ENST00000382543:exon4:c.C459T:p.D153D,ENSG00000196526:ENST00000358461:exon5:c.C459T:p.D153D,ENSG00000196526:ENST00000420658:exon5:c.C459T:p.D153D	Score=627;Name=lod=472	NA	4p16.1	NA	NA	Name=46	NA	rs28669852	0.04	0.04	0.036	0.0285543	0.0755	0.002	0.0403	0.0129	0.0204	0.08	0.0035	0.05	0.02	0.0554	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.329831	1.329831	NA	0.079767	0.021108	NA	0.029	NA	7.4559996
906	5	43245922	43245922	C	T	exonic	NIM1	NA	synonymous SNV	NIM1:NM_153361:exon2:c.C45T:p.H15H	exonic	ENSG00000177453	NA	synonymous SNV	ENSG00000177453:ENST00000326035:exon2:c.C45T:p.H15H,ENSG00000177453:ENST00000512796:exon2:c.C45T:p.H15H	Score=383;Name=lod=48	NA	5p12	NA	Name=EBF,BCL3,BATF	Name=6	NA	rs13176855	0.29	0.29	0.295	0.28734	0.4344	0.1409	0.2622	0.2905	0.3006	0.42	0.16	0.29	0.25	0.3542	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.290142	1.290142	NA	0.422209	0.29301	NA	0.362	NA	7.4558576
906	8	19221700	19221700	G	A	exonic	SH2D4A	NA	nonsynonymous SNV	SH2D4A:NM_001174160:exon6:c.G689A:p.S230N,SH2D4A:NM_001174159:exon7:c.G824A:p.S275N,SH2D4A:NM_022071:exon7:c.G824A:p.S275N	exonic	ENSG00000104611	NA	nonsynonymous SNV	ENSG00000104611:ENST00000518040:exon6:c.G689A:p.S230N,ENSG00000104611:ENST00000265807:exon7:c.G824A:p.S275N,ENSG00000104611:ENST00000519207:exon7:c.G824A:p.S275N	NA	NA	8p21.3	NA	NA	NA	NA	rs34608771	0.18	0.18	0.164	0.177915	0.3072	0.0595	0.2378	0.0946	0.2372	0.31	0.06	0.26	0.08	0.2605	0.31	0.58	T	0.003	B	0.003	B	0.358	N	1.000	P	0.845	L	2.62	T	-1.077	T	0.000	T	0.036	1.596	11.29	3.94	0.754	0.087	7.930	1.596322	1.596322	0.67	0.310349	0.126192	NA	0.123	NA	7.4552844
906	19	37038416	37038416	T	C	exonic	ZNF529	NA	synonymous SNV	ZNF529:NM_001145650:exon5:c.A990G:p.R330R,ZNF529:NM_020951:exon5:c.A1044G:p.R348R,ZNF529:NM_001145649:exon6:c.A1044G:p.R348R	exonic	ENSG00000186020	NA	synonymous SNV	ENSG00000186020:ENST00000590656:exon1:c.A15G:p.R5R,ENSG00000186020:ENST00000591340:exon5:c.A1044G:p.R348R,ENSG00000186020:ENST00000334116:exon6:c.A729G:p.R243R	NA	NA	19q13.12	NA	Name=USF-1,ZNF274,SETDB1,KAP1,ETS1	Name=56	NA	rs10424565	0.1	0.1	0.098	0.0814696	0.0606	0.0585	0.0576	0.1596	0.0378	0.06	0.07	0.06	0.22	0.0719	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.595973	NA	NA	0.079101	0.121399	NA	0.08	NA	7.4550656
907	19	52519608	52519608	C	T	exonic	ZNF614	NA	nonsynonymous SNV	ZNF614:NM_025040:exon5:c.G1243A:p.V415I	exonic	ENSG00000142556	NA	nonsynonymous SNV	ENSG00000142556:ENST00000270649:exon5:c.G1243A:p.V415I	NA	NA	19q13.41	NA	NA	NA	NA	rs8104890	0.34	0.34	0.335	0.403355	0.2773	0.4038	0.3444	0.3797	0.6063	0.29	0.36	0.33	0.4	0.3349	0.4	1	T	0.004	B	0.002	B	.	.	1.000	P	0.41	N	3.18	T	-0.923	T	0.000	T	0.01	-1.095	0.148	-0.11	-0.247	-1.520	4.080	-1.094924	NA	1	0.266395	0.380163	NA	0.283	NA	7.4547384
907	8	99205612	99205612	C	T	splicing	NIPAL2	NM_024759:exon12:c.1067+1G>A	NA	NA	splicing	ENSG00000104361	ENST00000341166:exon12:c.1067+1G>A	NA	NA	NA	NA	8q22.2	NA	Name=TAL1_(SC-12984),GATA2_(CG2-96)	NA	NA	rs3735887	0.56	0.56	0.542	0.582668	0.5	0.5893	0.6427	0.5461	0.6677	0.51	0.6	0.63	0.55	0.5364	0.63	.	.	.	.	.	.	.	.	0.997	P	.	.	.	.	.	.	.	.	.	1.352	10.44	3.65	0.402	1.145	6.783	1.351666	1.351666	NA	0.509186	0.519519	NA	0.543	NA	7.454414
907	19	22153495	22153495	A	T	UTR3	ZNF208	NM_007153:c.*498T>A	NA	NA	intronic	ENSG00000160321	NA	NA	NA	Score=422;Name=lod=69	NA	19p12	NA	Name=ZNF274	NA	NA	rs2359812	0.65	0.65	0.672	0.599641	0.5726	0.6925	0.6441	0.7209	0.3364	0.59	0.71	0.59	0.73	0.5669	0.73	0	D	0.0	B	0.0	B	.	.	0.000	P	.	.	.	.	-1.005	T	0.000	T	.	1.352	10.44	1.74	-0.177	0.959	5.726	1.35193	1.35193	0.06	0.573297	0.728074	NA	0.696	NA	7.4538697
907	16	56601722	56601722	T	C	exonic	MT4	NA	nonsynonymous SNV	MT4:NM_032935:exon2:c.T91C:p.W31R	exonic	ENSG00000102891	NA	nonsynonymous SNV	ENSG00000102891:ENST00000219162:exon2:c.T91C:p.W31R	Score=525;Name=lod=182	NA	16q12.2	NA	NA	NA	NA	rs666647	0.87	0.87	0.832	0.866014	0.9662	0.7192	0.9524	0.7859	0.9611	0.96	0.73	0.97	0.8	0.9375	0.98	0.49	T	0.0	B	0.0	B	0.000	N	1.000	P	.	.	3.23	T	-0.951	T	0.000	T	0.219	0.181	4.974	4.72	1.449	0.095	6.802	0.180928	NA	1	0.975889	0.836224	NA	0.007	NA	7.4537444
907	5	179036433	179036433	G	A	exonic	RUFY1	NA	synonymous SNV	RUFY1:NM_001040451:exon17:c.G1716A:p.L572L,RUFY1:NM_001040452:exon18:c.G1716A:p.L572L,RUFY1:NM_025158:exon18:c.G2040A:p.L680L	exonic	ENSG00000176783	NA	synonymous SNV	ENSG00000176783:ENST00000437570:exon17:c.G1716A:p.L572L,ENSG00000176783:ENST00000319449:exon18:c.G2040A:p.L680L,ENSG00000176783:ENST00000393438:exon18:c.G1716A:p.L572L	Score=608;Name=lod=393	NA	5q35.3	NA	Name=Pol2(phosphoS2),Pol2,Pol2-4H8,ZNF263	Name=61	NA	rs17355294	0.32	0.32	0.331	0.271765	0.4284	0.1706	0.3084	0.2912	0.1626	0.44	0.17	0.34	0.3	0.347	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.241659	1.241659	NA	0.438256	0.329097	NA	0.391	NA	7.4530106
907	1	176992676	176992676	C	T	exonic	ASTN1	NA	synonymous SNV	ASTN1:NM_004319:exon7:c.G1302A:p.Q434Q,ASTN1:NM_207108:exon7:c.G1302A:p.Q434Q	exonic	ENSG00000152092	NA	synonymous SNV	ENSG00000152092:ENST00000361833:exon7:c.G1302A:p.Q434Q,ENSG00000152092:ENST00000367654:exon7:c.G1302A:p.Q434Q,ENSG00000152092:ENST00000367657:exon7:c.G1302A:p.Q434Q,ENSG00000152092:ENST00000424564:exon7:c.G1302A:p.Q434Q	Score=730;Name=lod=1230	NA	1q25.2	Score=811;Name=V$MYOGNF1_01	NA	NA	Score=72;Name=167798_0_-_72	rs10798496	0.25	0.25	0.253	0.237021	0.4364	0.003	0.2248	0.264	0.2454	0.43	0.0035	0.25	0.24	0.35	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.960668	NA	NA	0.42814	0.275079	NA	0.435	NA	7.4521266
907	17	5042422	5042422	G	A	intronic	USP6	NA	NA	NA	exonic	ENSG00000129204	NA	nonsynonymous SNV	ENSG00000129204:ENST00000304328:exon14:c.G73A:p.V25I	NA	NA	17p13.2	NA	NA	NA	NA	rs4080179	0.36	0.36	0.353	0.418131	0.2237	0.6032	0.2997	0.3101	0.6575	0.23	0.62	0.29	0.31	0.3069	0.62	0	D	0.0	B	0.0	B	.	.	1.000	P	.	.	2.56	T	-0.865	T	0.000	T	0.011	-2.007	0.007	-0.093	-3.493	-3.546	.	-2.006631	NA	0.32	0.186841	0.292808	NA	0.275	NA	7.4492257
907	X	229542	229542	G	A	exonic	GTPBP6	NA	unknown	UNKNOWN	exonic	ENSG00000178605	NA	synonymous SNV	ENSG00000178605:ENST00000326153:exon2:c.C120T:p.A40A	Score=461;Name=lod=100	NA	Xp22.33	NA	NA	NA	NA	rs1140798	0.47	0.47	0.4539	NA	NA	NA	NA	NA	NA	0.41	0.56	0.53	0.39	0.4731	0.56	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	-1.39	0.024	-2.74	-0.428	-0.354	0.233	-1.389844	NA	NA	0.411687	0.410005	NA	0.42	NA	7.4485463
907	16	88874632	88874632	C	G	exonic	CDT1	NA	synonymous SNV	CDT1:NM_030928:exon10:c.C1587G:p.L529L	exonic	ENSG00000167513	NA	synonymous SNV	ENSG00000167513:ENST00000301019:exon10:c.C1587G:p.L529L	NA	NA	16q24.3	NA	Name=Pol2,Pol2-4H8	Name=7	NA	rs572275	0.56	0.56	0.573	0.552716	0.3767	0.6637	0.4942	0.7489	0.3957	0.37	0.71	0.46	0.73	0.4737	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.36415	NA	NA	0.368776	0.707952	NA	0.522	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116645.2;CLNDSDB=.;CLNDSDBID=.	7.4474906
907	10	5541230	5541230	T	C	exonic	CALML5	NA	nonsynonymous SNV	CALML5:NM_017422:exon1:c.A172G:p.S58G	exonic	ENSG00000178372	NA	nonsynonymous SNV	ENSG00000178372:ENST00000380332:exon1:c.A172G:p.S58G	NA	NA	10p15.1	NA	NA	NA	NA	rs11546426	0.29	0.29	0.307	0.296925	0.2972	0.2014	0.2133	0.4493	0.2485	0.29	0.2	0.23	0.44	0.2852	0.44	0	D	0.007	B	0.008	B	0.828	N	1.000	P	0.945	L	-0.66	T	-0.990	T	0.000	T	0.021	2.51	14.35	0.628	-0.000	0.567	3.708	2.509974	2.509974	0.02	0.303488	0.409442	NA	0.406	NA	7.4474454
907	16	20476852	20476852	T	C	exonic	ACSM2A	NA	nonsynonymous SNV	ACSM2A:NM_001010845:exon4:c.T191C:p.L64P	exonic	ENSG00000183747	NA	nonsynonymous SNV	ENSG00000183747:ENST00000396104:exon2:c.T191C:p.L64P,ENSG00000183747:ENST00000424070:exon3:c.T191C:p.L64P,ENSG00000183747:ENST00000573854:exon3:c.T191C:p.L64P,ENSG00000183747:ENST00000574692:exon3:c.T191C:p.L64P,ENSG00000183747:ENST00000219054:exon4:c.T191C:p.L64P,ENSG00000183747:ENST00000571894:exon4:c.T191C:p.L64P,ENSG00000183747:ENST00000575690:exon4:c.T191C:p.L64P,ENSG00000183747:ENST00000576361:exon4:c.T191C:p.L64P	NA	NA	16p12.3	Score=777;Name=V$AHRARNT_02	NA	NA	NA	rs7187246	0.48	0.48	0.452	0.505591	0.2654	0.753	0.268	0.6445	0.4785	0.27	0.74	0.28	0.64	0.3401	0.74	1	T	0.0	B	0.0	B	0.999	N	1.000	P	-0.895	N	1.47	T	-0.947	T	0.000	T	0.427	-1.672	0.012	-1.24	-0.478	-0.100	1.706	-1.672461	NA	0.26	0.280698	0.593509	NA	0.37	NA	7.4471354
907	2	132269281	132269281	T	A	ncRNA_intronic	LOC150776,RNU6-81P	NA	NA	NA	ncRNA_intronic	ENSG00000152117	NA	NA	NA	Score=621;Name=lod=447	NA	2q21.1	NA	Name=CTCF	Name=41	NA	rs12691991	0.34	0.34	0.266	0.334864	0.2197	0.6806	0.4265	0.1346	0.3027	0.21	0.66	0.38	0.13	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.952622	NA	NA	NA	NA	NA	0.275	NA	7.4469666
907	4	26719569	26719569	T	C	exonic	TBC1D19	NA	synonymous SNV	TBC1D19:NM_018317:exon14:c.T969C:p.F323F	exonic	ENSG00000109680	NA	synonymous SNV	ENSG00000109680:ENST00000511789:exon11:c.T774C:p.F258F,ENSG00000109680:ENST00000264866:exon14:c.T969C:p.F323F	Score=576;Name=lod=293	NA	4p15.2	Score=856;Name=V$E2F_03	NA	NA	NA	rs34600164	0.03	0.03	0.031	0.0469249	0.0785	0.0149	0.0331	0.0038	0.1155	0.08	0.01	0.03	0.002	0.0658	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.952767	NA	NA	0.075581	0.013391	NA	0.087	NA	7.4467856
908	4	175443156	175443156	C	T	exonic	HPGD	NA	synonymous SNV	HPGD:NM_000860:exon2:c.G156A:p.Q52Q,HPGD:NM_001145816:exon2:c.G156A:p.Q52Q,HPGD:NM_001256305:exon2:c.G156A:p.Q52Q,HPGD:NM_001256306:exon2:c.G156A:p.Q52Q	exonic	ENSG00000164120	NA	synonymous SNV	ENSG00000164120:ENST00000296521:exon2:c.G156A:p.Q52Q,ENSG00000164120:ENST00000296522:exon2:c.G156A:p.Q52Q,ENSG00000164120:ENST00000422112:exon2:c.G156A:p.Q52Q,ENSG00000164120:ENST00000504433:exon2:c.G156A:p.Q52Q,ENSG00000164120:ENST00000508330:exon2:c.G156A:p.Q52Q,ENSG00000164120:ENST00000542498:exon2:c.G156A:p.Q52Q	Score=475;Name=lod=114	NA	4q34.1	NA	Name=CTCF	Name=35	NA	rs1050145	0.38	0.38	0.337	0.339257	0.4066	0.4554	0.3213	0.261	0.2689	0.42	0.45	0.35	0.26	0.3862	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.409455	NA	NA	0.42907	0.271448	ID=COSM1131179;OCCURENCE=1(prostate)	0.261	NA	7.4447966
908	6	31324104	31324104	G	A	exonic	HLA-B	NA	synonymous SNV	HLA-B:NM_005514:exon3:c.C459T:p.D153D	exonic	ENSG00000234745	NA	synonymous SNV	ENSG00000234745:ENST00000434333:exon2:c.C492T:p.D164D,ENSG00000234745:ENST00000412585:exon3:c.C459T:p.D153D	NA	NA	6p21.33	NA	Name=Pol2-4H8	Name=6	NA	rs17839985	0.18	0.18	0.092	NA	NA	NA	NA	NA	NA	0.17	0.21	0.17	0.17	0.2219	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.470462	NA	NA	NA	NA	NA	NA	NA	7.4447666
908	20	8717713	8717713	G	A	exonic	PLCB1	NA	synonymous SNV	PLCB1:NM_015192:exon20:c.G2082A:p.G694G,PLCB1:NM_182734:exon20:c.G2082A:p.G694G	exonic	ENSG00000182621	NA	synonymous SNV	ENSG00000182621:ENST00000439627:exon1:c.G39A:p.G13G,ENSG00000182621:ENST00000338037:exon20:c.G2082A:p.G694G,ENSG00000182621:ENST00000378637:exon20:c.G2082A:p.G694G,ENSG00000182621:ENST00000378641:exon20:c.G2082A:p.G694G	Score=361;Name=lod=39	NA	20p12.3	NA	NA	NA	NA	rs3761170	0.08	0.08	0.066	0.0992412	0.0765	0.1349	0.0821	0.0371	0.182	0.06	0.11	0.12	0.02	0.0796	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.178369	NA	NA	0.067209	0.03813	NA	0.043	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117923.2;CLNDSDB=.;CLNDSDBID=.	7.4433576
908	12	95502303	95502303	G	A	exonic	FGD6	NA	synonymous SNV	FGD6:NM_018351:exon10:c.C3168T:p.H1056H	exonic	ENSG00000180263	NA	synonymous SNV	ENSG00000180263:ENST00000551521:exon3:c.C156T:p.H52H,ENSG00000180263:ENST00000343958:exon10:c.C3168T:p.H1056H,ENSG00000180263:ENST00000546711:exon10:c.C3168T:p.H1056H,ENSG00000180263:ENST00000549499:exon10:c.C3168T:p.H1056H	Score=611;Name=lod=407	NA	12q22	Score=802;Name=V$OCT_C	NA	NA	NA	rs11107896	0.11	0.11	0.109	0.104633	0.0577	0.1488	0.1484	0.0862	0.1012	0.06	0.18	0.16	0.09	0.0929	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.197553	NA	NA	0.073605	0.077848	NA	0.065	NA	7.4424616
908	11	1780867	1780867	G	A	exonic	CTSD	NA	synonymous SNV	CTSD:NM_001909:exon3:c.C231T:p.A77A	exonic	ENSG00000117984	NA	synonymous SNV	ENSG00000117984:ENST00000438213:exon2:c.C186T:p.A62A,ENSG00000117984:ENST00000236671:exon3:c.C231T:p.A77A,ENSG00000117984:ENST00000367196:exon3:c.C126T:p.A42A,ENSG00000117984:ENST00000433655:exon3:c.C231T:p.A77A	Score=462;Name=lod=101	NA	11p15.5	NA	NA	NA	NA	rs2230067	0.05	0.05	0.052	0.0553115	0.0736	0.0367	0.0533	0.0204	0.1043	0.08	0.03	0.07	0.03	0.0713	0.081	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.55672	1.55672	NA	0.080833	0.031804	NA	0.043	CLINSIG=probable-non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000116855.2|RCV000124637.1;CLNDSDB=.|.;CLNDSDBID=.|.	7.4409336
908	14	57052511	57052511	G	T	exonic	TMEM260	NA	synonymous SNV	TMEM260:NM_017799:exon3:c.G225T:p.T75T	exonic	ENSG00000070269	NA	synonymous SNV	ENSG00000070269:ENST00000261556:exon3:c.G225T:p.T75T,ENSG00000070269:ENST00000538838:exon3:c.G225T:p.T75T,ENSG00000070269:ENST00000539559:exon3:c.G225T:p.T75T,ENSG00000070269:ENST00000555497:exon3:c.G225T:p.T75T,ENSG00000070269:ENST00000556810:exon4:c.G114T:p.T38T	Score=557;Name=lod=245	NA	14q22.3	NA	Name=CTCF	Name=33	NA	rs3737171	0.37	0.37	0.335	0.323283	0.4254	0.4732	0.5346	0.0227	0.32	0.42	0.51	0.52	0.03	0.3911	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.400485	NA	NA	0.410116	0.088516	NA	0.268	NA	7.4400506
908	10	82363405	82363405	C	T	exonic	SH2D4B	NA	synonymous SNV	SH2D4B:NM_001145719:exon5:c.C567T:p.H189H,SH2D4B:NM_207372:exon5:c.C714T:p.H238H	exonic	ENSG00000178217	NA	synonymous SNV	ENSG00000178217:ENST00000313455:exon5:c.C567T:p.H189H,ENSG00000178217:ENST00000339284:exon5:c.C714T:p.H238H,ENSG00000178217:ENST00000470604:exon5:c.C711T:p.H237H	Score=513;Name=lod=162	NA	10q23.1	Score=787;Name=V$PAX5_01	NA	NA	NA	rs1913762	0.06	0.06	0.035	0.0660942	0.0706	0.0645	0.1614	0.0045	0.0787	0.07	0.05	0.11	0.01	0.0806	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.554544	1.554544	NA	0.075867	0.015924	NA	0.029	NA	7.4395996
908	14	39650824	39650824	C	T	exonic	PNN	NA	synonymous SNV	PNN:NM_002687:exon9:c.C1911T:p.G637G	exonic	ENSG00000100941	NA	synonymous SNV	ENSG00000100941:ENST00000216832:exon9:c.C1911T:p.G637G	Score=733;Name=lod=1267	NA	14q21.1	NA	Name=Pol2,Pol2-4H8,Pol2(b)	NA	NA	rs1050136	0.12	0.12	0.118	0.0984425	0.0706	0.3145	0.0461	0.003	0.0706	0.07	0.34	0.05	0.0041	0.0813	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.31773	NA	NA	0.077674	0.017476	NA	0.036	NA	7.4370926
908	2	10050960	10050960	A	G	exonic	TAF1B	NA	nonsynonymous SNV	TAF1B:NM_005680:exon10:c.A1051G:p.T351A	exonic	ENSG00000115750	NA	nonsynonymous SNV	ENSG00000115750:ENST00000263663:exon10:c.A1051G:p.T351A,ENSG00000115750:ENST00000396242:exon10:c.A286G:p.T96A	NA	NA	2p25.1	NA	NA	NA	NA	rs1054565	0.48	0.48	0.458	0.43131	0.6551	0.4514	0.536	0.1301	0.5133	0.64	0.48	0.57	0.15	0.5743	0.67	.	.	0.024	B	0.005	B	0.026	N	1.000	P	0.92	L	3.96	T	-1.073	T	0.000	T	0.026	1.354	10.45	2.11	0.128	1.277	5.882	1.354141	1.354141	0.74	0.667907	0.210622	NA	0.536	NA	7.4360264
909	8	22926313	22926313	G	A	exonic	TNFRSF10B	NA	nonsynonymous SNV	TNFRSF10B:NM_003842:exon1:c.C95T:p.P32L,TNFRSF10B:NM_147187:exon1:c.C95T:p.P32L	exonic	ENSG00000120889	NA	nonsynonymous SNV	ENSG00000120889:ENST00000276431:exon1:c.C95T:p.P32L,ENSG00000120889:ENST00000347739:exon1:c.C95T:p.P32L,ENSG00000120889:ENST00000523504:exon1:c.C95T:p.P32L	NA	NA	8p21.3	NA	Name=GR,Pol2	Name=81	NA	rs1129424	0.74	0.74	0.696	0.749401	0.5924	0.9107	0.7493	0.7753	0.7096	0.59	0.91	0.74	0.78	0.7015	0.91	0.82	T	0.0	B	0.0	B	0.258	N	1.000	P	-1.65	N	-1.44	T	-0.996	T	0.000	T	0.025	-1.358	0.028	0.126	-0.291	-0.111	4.248	-1.358005	NA	1	0.604858	0.748976	NA	0.565	NA	7.4345754
909	1	180240510	180240510	T	C	ncRNA_exonic	LOC100527964	NA	NA	NA	ncRNA_exonic	ENSG00000230124	NA	NA	NA	Score=452;Name=lod=92	NA	1q25.2	NA	Name=E2F6_(H-50),TAL1_(SC-12984),GABP,YY1,Egr-1,HDAC2_(SC-6296),Pol2-4H8,eGFP-JunD,FOSL1_(SC-183),eGFP-FOS,USF-1	Name=79	NA	rs2764449	0.04	0.04	0.035	0.0413339	0.0855	0.0139	0.0375	0.0038	0.0777	0.09	0.02	0.04	0.0041	0.0665	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.96237	1.96237	NA	0.080349	0.017476	NA	0.029	NA	7.4343176
909	12	6450945	6450945	T	C	exonic	TNFRSF1A	NA	synonymous SNV	TNFRSF1A:NM_001065:exon1:c.A36G:p.P12P	exonic	ENSG00000067182	NA	synonymous SNV	ENSG00000067182:ENST00000162749:exon1:c.A36G:p.P12P,ENSG00000067182:ENST00000366159:exon1:c.A36G:p.P12P,ENSG00000067182:ENST00000440083:exon1:c.A36G:p.P12P,ENSG00000067182:ENST00000534885:exon1:c.A36G:p.P12P,ENSG00000067182:ENST00000536194:exon1:c.A36G:p.P12P,ENSG00000067182:ENST00000539372:exon1:c.A36G:p.P12P,ENSG00000067182:ENST00000540022:exon1:c.A36G:p.P12P,ENSG00000067182:ENST00000543048:exon1:c.A36G:p.P12P,ENSG00000067182:ENST00000543995:exon1:c.A36G:p.P12P	Score=487;Name=lod=127	NA	12p13.31	NA	Name=EBF1_(C-8),Pol2,YY1_(C-20),HMGN3,NFKB	Name=146	NA	rs767455	0.33	0.33	0.349	0.301518	0.4294	0.122	0.3012	0.3631	0.272	0.43	0.14	0.36	0.36	0.3755	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.210368	NA	NA	0.427558	0.358375	ID=COSM431654;OCCURENCE=1(breast)	0.29	NA	7.4342086
909	5	140801298	140801298	C	A	exonic	PCDHGA11	NA	synonymous SNV	PCDHGA11:NM_018914:exon1:c.C504A:p.L168L,PCDHGA11:NM_032091:exon1:c.C504A:p.L168L,PCDHGA11:NM_032092:exon1:c.C504A:p.L168L	exonic	ENSG00000253873	NA	synonymous SNV	ENSG00000253873:ENST00000398587:exon1:c.C504A:p.L168L,ENSG00000253873:ENST00000518882:exon1:c.C504A:p.L168L	Score=448;Name=lod=88	NA	5q31.3	Score=859;Name=V$P300_01	NA	NA	NA	rs73792198	0.12	0.12	0.118	0.127995	0.0586	0.1181	0.1513	0.1762	0.1278	0.07	0.12	0.13	0.18	0.0996	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.331051	NA	NA	0.074266	0.170191	NA	0.116	NA	7.4342006
909	8	21833965	21833965	C	T	exonic	XPO7	NA	synonymous SNV	XPO7:NM_015024:exon7:c.C696T:p.I232I	exonic	ENSG00000130227	NA	synonymous SNV	ENSG00000130227:ENST00000252512:exon7:c.C696T:p.I232I,ENSG00000130227:ENST00000433566:exon7:c.C699T:p.I233I,ENSG00000130227:ENST00000434536:exon7:c.C723T:p.I241I	Score=675;Name=lod=736	NA	8p21.3	Score=735;Name=V$PPARG_01	NA	Name=6	NA	rs2306641	0.35	0.35	0.348	0.294129	0.4563	0.4008	0.2104	0.2186	0.1789	0.46	0.38	0.24	0.23	0.357	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.993887	NA	NA	0.419626	0.269668	NA	0.442	NA	7.4337406
909	12	6128443	6128443	T	C	exonic	VWF	NA	nonsynonymous SNV	VWF:NM_000552:exon28:c.A4141G:p.T1381A	exonic	ENSG00000110799	NA	nonsynonymous SNV	ENSG00000110799:ENST00000261405:exon28:c.A4141G:p.T1381A	NA	NA	12p13.31	NA	NA	NA	NA	rs216311	0.73	0.73	0.688	0.775559	0.6014	0.746	0.7752	0.9228	0.7863	0.59	0.73	0.75	0.94	0.6798	0.94	1	T	0.0	B	0.001	B	0.739	N	1.000	P	-1.585	N	-1.57	D	-0.970	T	0.000	T	0.06	-2.011	0.007	0.201	-0.389	1.834	9.533	-2.011176	NA	1	0.619884	0.881979	NA	0.717	NA	7.4322494
909	5	137665323	137665323	G	A	exonic	CDC25C	NA	nonsynonymous SNV	CDC25C:NM_001790:exon3:c.C208T:p.R70C	exonic	ENSG00000158402	NA	nonsynonymous SNV	ENSG00000158402:ENST00000514555:exon2:c.C208T:p.R70C,ENSG00000158402:ENST00000323760:exon3:c.C208T:p.R70C,ENSG00000158402:ENST00000356505:exon3:c.C208T:p.R70C,ENSG00000158402:ENST00000503022:exon3:c.C208T:p.R70C,ENSG00000158402:ENST00000510119:exon3:c.C259T:p.R87C,ENSG00000158402:ENST00000513970:exon3:c.C208T:p.R70C	Score=482;Name=lod=121	NA	5q31.2	NA	NA	NA	NA	rs3734166	0.41	0.41	0.399	0.390176	0.3072	0.6101	0.2983	0.4773	0.1963	0.3	0.58	0.27	0.47	0.3176	0.58	0.19	T	0.009	B	0.002	B	0.138	N	0.000	P	-0.235	N	1.64	T	-0.944	T	0.000	T	0.24	1.974	12.56	-0.963	-0.138	-0.842	7.809	1.973598	1.973598	0.07	0.277674	0.445756	NA	0.348	NA	7.4308594
909	17	16527795	16527795	C	A	exonic	ZNF624	NA	nonsynonymous SNV	ZNF624:NM_020787:exon6:c.G405T:p.K135N	exonic	ENSG00000197566	NA	nonsynonymous SNV	ENSG00000197566:ENST00000311331:exon6:c.G405T:p.K135N	NA	NA	17p11.2	NA	NA	NA	NA	rs8065506	0.43	0.43	0.42	0.487819	0.2674	0.5347	0.3847	0.6906	0.4652	0.25	0.53	0.35	0.65	0.3637	0.65	0.51	T	0.0	B	0.0	B	.	.	1.000	P	0.49	N	3.45	T	-1.063	T	0.000	T	0.006	-1.222	0.062	2.92	0.537	0.419	7.381	-1.222243	NA	NA	0.271395	0.644803	NA	0.399	NA	7.4308384
909	10	30728250	30728250	A	G	intronic	MAP3K8	NA	NA	NA	exonic	ENSG00000107968	NA	nonsynonymous SNV	ENSG00000107968:ENST00000375322:exon3:c.A383G:p.Y128C	NA	NA	10p11.23	NA	NA	NA	NA	rs2907	0.44	0.44	0.4	0.363818	0.6044	0.3492	0.5245	0.1362	0.3252	0.61	0.39	0.51	0.17	0.5305	0.61	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.941	T	0.000	T	0.167	1.28	10.18	-7.09	-1.672	-1.495	2.282	1.280373	1.280373	0.17	0.601535	0.196502	NA	0.362	NA	7.4302317
909	16	68225515	68225515	G	A	exonic	NFATC3	NA	synonymous SNV	NFATC3:NM_004555:exon9:c.G2943A:p.T981T,NFATC3:NM_173163:exon9:c.G2943A:p.T981T,NFATC3:NM_173165:exon9:c.G2943A:p.T981T	exonic	ENSG00000072736	NA	synonymous SNV	ENSG00000072736:ENST00000329524:exon9:c.G2943A:p.T981T,ENSG00000072736:ENST00000346183:exon9:c.G2943A:p.T981T,ENSG00000072736:ENST00000349223:exon9:c.G2943A:p.T981T,ENSG00000072736:ENST00000575270:exon9:c.G2943A:p.T981T	Score=689;Name=lod=843	NA	16q22.1	Score=746;Name=V$PPARA_01	NA	NA	NA	rs12598	0.03	0.03	0.036	0.0345447	0.0825	NA	0.0187	0.0038	0.0736	0.09	NA	0.01	NA	0.0635	0.091	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.383584	NA	NA	0.090698	0.017061	NA	0.029	NA	7.4299686
909	18	44560300	44560300	C	T	exonic	TCEB3B	NA	nonsynonymous SNV	TCEB3B:NM_016427:exon1:c.G1336A:p.A446T	exonic	ENSG00000206181	NA	nonsynonymous SNV	ENSG00000206181:ENST00000332567:exon1:c.G1336A:p.A446T	NA	NA	18q21.1	NA	NA	NA	NA	rs3744863	0.51	0.51	0.51	0.534145	0.4433	0.6448	0.6239	0.4349	0.5838	0.44	0.63	0.58	0.43	0.506	0.63	0.36	T	0.999	D	0.895	P	0.262	N	1.000	P	1.24	L	3.16	T	-0.975	T	0.000	T	0.055	2.199	13.31	-0.047	-0.022	0.052	4.076	2.198727	2.198727	0.08	0.454969	0.443032	NA	0.413	NA	7.4290644
909	11	59225221	59225221	T	C	exonic	OR4D6	NA	nonsynonymous SNV	OR4D6:NM_001004708:exon1:c.T788C:p.M263T	exonic	ENSG00000166884	NA	nonsynonymous SNV	ENSG00000166884:ENST00000300127:exon1:c.T788C:p.M263T	NA	NA	11q12.1	NA	NA	NA	NA	rs1453541	0.29	0.29	0.272	0.265375	0.2972	0.1845	0.2695	0.3245	0.2331	0.31	0.21	0.3	0.32	0.2912	0.33	1	T	0.0	B	0.0	B	0.608	N	1.000	P	-2.37	N	8.8	T	-0.972	T	0.000	T	0.007	-3.143	0.001	-2.74	-0.898	-0.221	4.660	-3.14294	NA	1	0.315949	0.333712	NA	0.203	NA	7.4289844
909	2	228131752	228131752	G	A	exonic	COL4A3	NA	synonymous SNV	COL4A3:NM_000091:exon23:c.G1452A:p.G484G	exonic	ENSG00000169031	NA	synonymous SNV	ENSG00000169031:ENST00000396578:exon23:c.G1452A:p.G484G	NA	NA	2q36.3	Score=703;Name=V$LUN1_01	Name=FOXA1_(SC-101058),GR,FOXA1_(C-20)	NA	NA	rs34019152	0.1	0.1	0.078	0.105232	0.0686	0.1577	0.1787	0.0454	0.1176	0.06	0.15	0.16	0.04	0.0923	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.244729	NA	NA	0.077599	0.047185	NA	0.051	NA	7.4281676
909	11	4510285	4510285	A	G	exonic	OR52K1	NA	nonsynonymous SNV	OR52K1:NM_001005171:exon1:c.A155G:p.Q52R	exonic	ENSG00000196778	NA	nonsynonymous SNV	ENSG00000196778:ENST00000307632:exon1:c.A155G:p.Q52R	NA	NA	11p15.4	NA	NA	NA	NA	rs96489	0.35	0.35	0.354	0.383986	0.2952	0.3194	0.2161	0.5477	0.4397	0.27	0.35	0.27	0.55	0.3153	0.55	0.9	T	0.0	B	0.0	B	0.667	N	1.000	P	-0.95	N	4.1	T	-0.970	T	0.000	T	0.013	-3.198	0.001	-1.92	-0.754	-6.840	7.262	-3.197733	NA	0.76	0.295952	0.504316	ID=COSM147107;OCCURENCE=1(stomach)	0.319	NA	7.4268814
909	1	161145005	161145005	C	T	exonic	B4GALT3	NA	synonymous SNV	B4GALT3:NM_001199873:exon4:c.G267A:p.S89S,B4GALT3:NM_001199874:exon4:c.G267A:p.S89S,B4GALT3:NM_003779:exon4:c.G267A:p.S89S	exonic	ENSG00000158850	NA	synonymous SNV	ENSG00000158850:ENST00000319769:exon4:c.G267A:p.S89S,ENSG00000158850:ENST00000367998:exon4:c.G267A:p.S89S	Score=445;Name=lod=86	NA	1q23.3	Score=736;Name=V$PPARA_01	NA	NA	NA	rs3813620	0.07	0.07	0.089	0.0910543	0.0736	0.0675	0.0663	0.1044	0.1329	0.07	0.06	0.06	0.1	0.0873	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.925287	NA	NA	0.07907	0.115751	NA	0.051	NA	7.4266966
909	11	59271637	59271637	T	C	exonic	OR4D11	NA	nonsynonymous SNV	OR4D11:NM_001004706:exon1:c.T589C:p.F197L	exonic	ENSG00000176200	NA	nonsynonymous SNV	ENSG00000176200:ENST00000313253:exon1:c.T589C:p.F197L	Score=391;Name=lod=52	NA	11q12.1	NA	NA	NA	NA	rs7120079	0.3	0.3	0.311	0.302516	0.3091	0.2758	0.2219	0.289	0.3988	0.3	0.26	0.25	0.36	0.2966	0.37	1	T	0.0	B	0.0	B	0.052	N	1.000	P	-1.89	N	8.93	T	-0.988	T	0.000	T	0.039	-1.882	0.008	1.12	-0.284	-0.412	5.447	-1.881657	NA	1	0.302095	0.278283	ID=COSM147254;OCCURENCE=1(stomach)	0.37	NA	7.4255384
910	11	290918	290918	G	A	exonic	ATHL1	NA	synonymous SNV	ATHL1:NM_025092:exon4:c.G711A:p.Q237Q	exonic	ENSG00000142102	NA	synonymous SNV	ENSG00000142102:ENST00000409479:exon3:c.G711A:p.Q237Q,ENSG00000142102:ENST00000409548:exon4:c.G711A:p.Q237Q,ENSG00000142102:ENST00000409655:exon4:c.G180A:p.Q60Q	Score=433;Name=lod=77	NA	11p15.5	Score=858;Name=V$AP4_01	NA	NA	NA	rs72636978	0.16	0.16	0.135	0.180911	0.0586	0.3056	0.2219	0.1543	0.1851	0.06	0.31	0.18	0.13	0.1278	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.439109	NA	NA	0.055698	0.137767	NA	0.036	NA	7.4245686
910	18	13095609	13095609	T	C	exonic	CEP192	NA	nonsynonymous SNV	CEP192:NM_032142:exon35:c.T6362C:p.L2121P	exonic	ENSG00000101639	NA	nonsynonymous SNV	ENSG00000101639:ENST00000430049:exon25:c.T4937C:p.L1646P,ENSG00000101639:ENST00000510237:exon26:c.T5162C:p.L1721P,ENSG00000101639:ENST00000325971:exon33:c.T4574C:p.L1525P,ENSG00000101639:ENST00000506447:exon35:c.T6362C:p.L2121P	NA	NA	18p11.21	NA	NA	NA	NA	rs474337	0.75	0.75	0.785	0.769968	0.6193	0.8105	0.6455	0.9486	0.7301	0.62	0.81	0.66	0.94	0.6697	0.94	0.29	T	0.003	B	0.003	B	0.013	N	0.983	P	-0.345	N	1.59	T	-1.032	T	0.000	T	0.07	1.512	11.01	3.43	0.506	1.599	8.775	1.512281	1.512281	NA	0.619767	0.882206	NA	0.674	NA	7.4245664
910	3	194062519	194062519	C	T	exonic	CPN2	NA	nonsynonymous SNV	CPN2:NM_001080513:exon2:c.G913A:p.A305T	exonic	ENSG00000178772	NA	nonsynonymous SNV	ENSG00000178772:ENST00000323830:exon2:c.G913A:p.A305T,ENSG00000178772:ENST00000429275:exon2:c.G913A:p.A305T	NA	NA	3q29	NA	NA	NA	NA	rs3732477	0.37	0.37	0.38	0.366414	0.3131	0.3185	0.2752	0.4561	0.4141	0.34	0.36	0.34	0.43	0.3145	0.43	0.98	T	0.017	B	0.009	B	0.339	N	1.000	P	0.475	N	0.34	T	-0.998	T	0.000	T	0.033	0.226	5.221	-10.6	-2.493	-0.271	13.970	0.226234	NA	0.04	0.282674	0.410123	NA	0.304	NA	7.4230594
910	10	99350017	99350017	G	C	exonic	C10orf62	NA	nonsynonymous SNV	C10orf62:NM_001009997:exon1:c.G363C:p.E121D	exonic	ENSG00000203942	NA	nonsynonymous SNV	ENSG00000203942:ENST00000370640:exon1:c.G363C:p.E121D	NA	NA	10q24.2	Score=915;Name=V$USF_02	NA	NA	NA	rs7093840	0.25	0.25	0.23	0.264976	0.3082	0.1369	0.2896	0.3124	0.271	0.3	0.12	0.25	0.34	0.2896	0.34	0.43	T	0.041	B	0.028	B	0.272	N	0.995	P	0.205	N	0.71	T	-0.941	T	0.000	T	0.027	0.664	7.559	-0.32	-0.074	-0.377	4.671	0.664348	NA	0.53	0.313837	0.33409	NA	0.196	NA	7.4216964
910	6	74521947	74521947	C	T	exonic	CD109	NA	nonsynonymous SNV	CD109:NM_001159588:exon28:c.C3491T:p.T1164M,CD109:NM_001159587:exon29:c.C3671T:p.T1224M,CD109:NM_133493:exon29:c.C3722T:p.T1241M	exonic	ENSG00000156535	NA	nonsynonymous SNV	ENSG00000156535:ENST00000422508:exon28:c.C3491T:p.T1164M,ENSG00000156535:ENST00000287097:exon29:c.C3722T:p.T1241M,ENSG00000156535:ENST00000437994:exon29:c.C3671T:p.T1224M	NA	NA	6q13	NA	NA	NA	NA	rs2917862	0.42	0.42	0.36	0.408347	0.4901	0.4583	0.4669	0.202	0.5102	0.51	0.46	0.44	0.23	0.45	0.51	0.13	T	0.81	P	0.253	B	0.736	N	1.000	P	1.59	L	2.02	T	-1.031	T	0.025	T	0.052	0.016	4.096	-1.95	-0.333	-0.978	12.627	0.015803	NA	0.2	0.471628	0.258965	NA	0.457	NA	7.4216054
910	5	159520661	159520661	T	C	exonic	PWWP2A	NA	synonymous SNV	PWWP2A:NM_001130864:exon2:c.A996G:p.E332E,PWWP2A:NM_001267035:exon2:c.A996G:p.E332E,PWWP2A:NM_052927:exon2:c.A996G:p.E332E	exonic	ENSG00000170234	NA	synonymous SNV	ENSG00000170234:ENST00000307063:exon2:c.A996G:p.E332E,ENSG00000170234:ENST00000456329:exon2:c.A996G:p.E332E,ENSG00000170234:ENST00000523662:exon2:c.A996G:p.E332E	Score=665;Name=lod=672	NA	5q33.3	NA	Name=NFKB	NA	NA	rs56251777	0.04	0.04	0.03	0.0303514	0.0845	0.001	0.0519	0.0083	0.0194	0.09	0.0017	0.06	0.01	0.0677	0.093	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.326761	NA	NA	0.093421	0.017534	NA	0.022	NA	7.4210456
910	9	114371322	114371322	T	C	ncRNA_exonic	LRRC37A5P	NA	NA	NA	ncRNA_exonic	ENSG00000204173	NA	NA	NA	NA	NA	9q31.3	NA	NA	NA	NA	rs4978450	NA	NA	NA	0.208267	0.1113	0.1617	0.0778	0.4032	0.1851	NA	NA	NA	NA	0.1345	0.23	0	D	.	.	.	.	.	.	1.000	N	.	.	.	.	-0.866	T	0.126	T	.	0.161	4.866	0.957	0.007	-1.070	3.686	0.160935	NA	0.01	NA	NA	NA	0.196	NA	7.4208666
910	8	30242076	30242076	T	C	ncRNA_UTR5	RBPMS	NA	NA	NA	ncRNA_UTR5	ENSG00000157110	NA	NA	NA	Score=378;Name=lod=46	NA	8p12	NA	Name=TBP,HEY1,Pol2-4H8,ZNF263,Sin3Ak-20,Pol2,TAF1	Name=111	NA	rs113142693	0.29	0.29	0.276	0.288339	0.2465	0.3304	0.2695	0.3578	0.2076	0.23	0.35	0.29	0.3	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.448804	2.448804	NA	NA	NA	NA	0.029	NA	7.4201666
910	1	17575645	17575645	A	C	exonic	PADI3	NA	synonymous SNV	PADI3:NM_016233:exon1:c.A13C:p.R5R	exonic	ENSG00000142619	NA	synonymous SNV	ENSG00000142619:ENST00000375460:exon1:c.A13C:p.R5R	Score=329;Name=lod=29	NA	1p36.13	NA	Name=TBP	NA	NA	rs3763589	0.09	0.09	0.064	0.116014	0.0746	0.1538	0.1239	0.031	0.229	0.07	0.15	0.12	0.03	0.0954	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.848121	1.848121	NA	0.077674	0.035406	NA	0.065	NA	7.4189926
910	3	125266387	125266387	G	A	exonic	OSBPL11	NA	synonymous SNV	OSBPL11:NM_022776:exon10:c.C1704T:p.P568P	exonic	ENSG00000144909	NA	synonymous SNV	ENSG00000144909:ENST00000296220:exon10:c.C1704T:p.P568P	Score=662;Name=lod=656	NA	3q21.2	Score=904;Name=V$OCT1_02	NA	NA	NA	rs35535572	0.05	0.05	0.037	0.043131	0.0716	0.0347	0.098	0.0076	0.0317	0.07	0.04	0.08	0.01	0.0761	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.997275	NA	NA	0.100814	0.02542	NA	0.036	NA	7.4181526
910	17	78078709	78078709	T	C	exonic	GAA	NA	synonymous SNV	GAA:NM_000152:exon2:c.T324C:p.C108C,GAA:NM_001079804:exon2:c.T324C:p.C108C,GAA:NM_001079803:exon3:c.T324C:p.C108C	exonic	ENSG00000171298	NA	synonymous SNV	ENSG00000171298:ENST00000302262:exon2:c.T324C:p.C108C,ENSG00000171298:ENST00000570803:exon2:c.T324C:p.C108C,ENSG00000171298:ENST00000390015:exon3:c.T324C:p.C108C,ENSG00000171298:ENST00000577106:exon3:c.T324C:p.C108C	Score=436;Name=lod=79	NA	17q25.3	Score=845;Name=V$AP4_01	Name=ERalpha_a,ZNF263	NA	NA	rs1800300	0.69	0.69	0.714	0.714457	0.7634	0.6518	0.562	0.7186	0.8313	0.76	0.67	0.57	0.71	0.7367	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.41148	NA	NA	0.749011	0.697548	NA	0.616	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000078180.2;CLNDSDB=.;CLNDSDBID=.	7.4175556
910	19	48836673	48836673	G	T	exonic	TMEM143	NA	synonymous SNV	TMEM143:NM_018273:exon8:c.C1183A:p.R395R	exonic	ENSG00000161558	NA	synonymous SNV	ENSG00000161558:ENST00000377431:exon6:c.C883A:p.R295R,ENSG00000161558:ENST00000541566:exon6:c.C853A:p.R285R,ENSG00000161558:ENST00000435956:exon7:c.C1078A:p.R360R,ENSG00000161558:ENST00000436660:exon7:c.C988A:p.R330R,ENSG00000161558:ENST00000293261:exon8:c.C1183A:p.R395R	Score=343;Name=lod=33	NA	19q13.33	Score=856;Name=V$E47_01	Name=NFKB,ZEB1_(SC-25388),HEY1,Pol2-4H8,ELF1_(SC-631),Pol2	NA	NA	rs3826828	0.34	0.34	0.334	0.335463	0.4175	0.3482	0.3847	0.2595	0.3057	0.39	0.31	0.41	0.25	0.3908	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.34568	1.34568	NA	0.44093	0.290286	NA	0.413	NA	7.4174366
910	18	12984144	12984144	C	A	exonic	SEH1L	NA	nonsynonymous SNV	SEH1L:NM_001013437:exon8:c.C1025A:p.T342N,SEH1L:NM_031216:exon8:c.C1025A:p.T342N	exonic	ENSG00000085415	NA	nonsynonymous SNV	ENSG00000085415:ENST00000262124:exon8:c.C1025A:p.T342N,ENSG00000085415:ENST00000399892:exon8:c.C1025A:p.T342N	Score=689;Name=lod=842	NA	18p11.21	NA	NA	NA	NA	rs6505776	0.75	0.75	0.785	0.782149	0.6203	0.8105	0.6441	0.9788	0.7515	0.62	0.81	0.65	0.97	0.6769	0.97	0.69	T	0.0	B	0.0	B	0.007	N	1.000	P	-1.1	N	-0.29	T	-0.992	T	0.000	T	0.021	-0.07	3.658	1.0	-0.279	1.686	7.079	-0.070133	NA	NA	0.620726	0.921244	NA	0.645	NA	7.4154074
911	2	15607842	15607842	T	C	exonic	NBAS	NA	nonsynonymous SNV	NBAS:NM_015909:exon18:c.A1964G:p.K655R	exonic	ENSG00000151779	NA	nonsynonymous SNV	ENSG00000151779:ENST00000281513:exon18:c.A1964G:p.K655R,ENSG00000151779:ENST00000441750:exon18:c.A1964G:p.K655R	NA	NA	2p24.3	NA	NA	NA	NA	rs4668909	0.4	0.4	0.352	0.360623	0.6879	0.1617	0.5677	0.1135	0.4162	0.67	0.18	0.57	0.12	0.5505	0.68	0	D	0.0	B	0.002	B	0.000	N	1.000	P	0.6	N	3.02	T	-0.985	T	0.000	T	0.025	1.486	10.91	-1.26	-0.370	1.492	12.019	1.485579	1.485579	0.11	0.680581	0.220481	NA	0.478	NA	7.4143524
911	17	7412403	7412403	T	C	exonic	POLR2A	NA	synonymous SNV	POLR2A:NM_000937:exon21:c.T3606C:p.F1202F	exonic	ENSG00000181222	NA	synonymous SNV	ENSG00000181222:ENST00000322644:exon21:c.T3606C:p.F1202F	Score=615;Name=lod=421	NA	17p13.1	Score=830;Name=V$ATF_01	NA	NA	NA	rs2228133	0.13	0.13	0.104	0.110423	0.0805	0.2183	0.1859	0.0431	0.0675	0.09	0.23	0.19	0.05	0.1016	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.310196	1.310196	NA	0.070349	0.061961	NA	0.036	NA	7.4142176
911	19	57967049	57967049	G	T	exonic	VN1R1	NA	nonsynonymous SNV	VN1R1:NM_020633:exon1:c.C806A:p.A269D	exonic	ENSG00000178201,ENSG00000268163	NA	nonsynonymous SNV	ENSG00000178201:ENST00000321039:exon1:c.C806A:p.A269D,ENSG00000268163:ENST00000596831:exon5:c.C319A:p.P107T	NA	NA	19q13.43	NA	NA	NA	NA	rs61744949	0.4	0.4	0.391	0.413339	0.2783	0.5913	0.451	0.3109	0.4806	0.3	0.64	0.37	0.3	0.3567	0.64	0.05	D	0.13	B	0.123	B	.	.	1.000	P	0.705	N	3.0	T	-1.016	T	0.000	T	0.091	1.243	10.04	-0.913	-0.140	0.517	4.083	1.242857	1.242857	0.74	0.285349	0.304585	NA	0.326	NA	7.4129844
911	11	82875359	82875359	G	A	exonic	PCF11	NA	synonymous SNV	PCF11:NM_015885:exon4:c.G618A:p.Q206Q	exonic	ENSG00000165494	NA	synonymous SNV	ENSG00000165494:ENST00000298281:exon4:c.G618A:p.Q206Q,ENSG00000165494:ENST00000530304:exon4:c.G618A:p.Q206Q,ENSG00000165494:ENST00000530660:exon4:c.G618A:p.Q206Q	Score=702;Name=lod=950	NA	11q14.1	Score=793;Name=V$CMYB_01	NA	NA	NA	rs7130527	0.09	0.09	0.106	0.103634	0.0805	0.0496	0.0663	0.1641	0.1278	0.07	0.05	0.07	0.18	0.0878	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.449653	NA	NA	0.085777	0.147678	NA	0.116	NA	7.4125896
911	19	57967133	57967133	G	A	exonic	VN1R1	NA	nonsynonymous SNV	VN1R1:NM_020633:exon1:c.C722T:p.S241F	exonic	ENSG00000178201	NA	nonsynonymous SNV	ENSG00000178201:ENST00000321039:exon1:c.C722T:p.S241F	NA	NA	19q13.43	NA	NA	NA	NA	rs28649880	0.4	0.4	0.391	0.413938	0.2793	0.5913	0.451	0.3124	0.4806	0.3	0.64	0.37	0.3	0.3569	0.64	0.76	T	0.855	P	0.55	P	.	.	1.000	P	1.53	L	3.1	T	-0.999	T	0.000	T	0.281	1.767	11.87	0.384	0.461	-0.546	2.050	1.766615	1.766615	0.1	0.285233	0.305039	ID=COSM1179788;OCCURENCE=1(prostate)	0.326	NA	7.4119004
911	11	12903443	12903443	C	T	exonic	TEAD1	NA	synonymous SNV	TEAD1:NM_021961:exon8:c.C513T:p.D171D	exonic	ENSG00000187079	NA	synonymous SNV	ENSG00000187079:ENST00000526600:exon3:c.C225T:p.D75D,ENSG00000187079:ENST00000361985:exon7:c.C513T:p.D171D,ENSG00000187079:ENST00000527575:exon7:c.C513T:p.D171D,ENSG00000187079:ENST00000334310:exon8:c.C480T:p.D160D,ENSG00000187079:ENST00000361905:exon8:c.C468T:p.D156D,ENSG00000187079:ENST00000527636:exon8:c.C513T:p.D171D	Score=586;Name=lod=321	NA	11p15.2	Score=773;Name=V$TAXCREB_01	Name=GATA-2	NA	NA	rs2304733	0.49	0.49	0.484	0.433706	0.4195	0.8393	0.2925	0.2973	0.3149	0.42	0.83	0.29	0.35	0.4246	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.471361	1.471361	NA	0.411737	0.315909	NA	0.442	NA	7.4108296
911	2	160673526	160673526	A	G	exonic	LY75,LY75-CD302	NA	nonsynonymous SNV	LY75-CD302:NM_001198759:exon30:c.T4171C:p.Y1391H,LY75-CD302:NM_001198760:exon30:c.T4171C:p.Y1391H,LY75:NM_002349:exon30:c.T4171C:p.Y1391H	exonic	ENSG00000054219,ENSG00000248672	NA	nonsynonymous SNV	ENSG00000054219:ENST00000263636:exon30:c.T4171C:p.Y1391H,ENSG00000248672:ENST00000504764:exon30:c.T4171C:p.Y1391H,ENSG00000248672:ENST00000505052:exon30:c.T4171C:p.Y1391H,ENSG00000054219:ENST00000553424:exon30:c.T4171C:p.Y1391H,ENSG00000054219:ENST00000554112:exon30:c.T4171C:p.Y1391H	Score=457;Name=lod=96	NA	2q24.2	NA	NA	NA	NA	rs2059696	0.25	0.25	0.202	0.205671	0.327	0.2212	0.4827	0.0287	0.1074	0.33	0.21	0.43	0.03	0.2873	0.43	0.53	T	0.01	B	0.013	B	0.109	N	0.984	P	0.805	L	2.3	T	-0.900	T	0.000	T	0.169	1.144	9.66	1.99	0.166	0.893	5.911	1.143804	NA	0.49	0.308372	0.069678	ID=COSM148967;OCCURENCE=1(stomach)	0.333	NA	7.4106614
911	12	132682484	132682484	A	G	exonic	GALNT9	NA	synonymous SNV	GALNT9:NM_021808:exon6:c.T420C:p.D140D,GALNT9:NM_001122636:exon10:c.T1518C:p.D506D	exonic	ENSG00000182870	NA	synonymous SNV	ENSG00000182870:ENST00000541995:exon5:c.T420C:p.D140D,ENSG00000182870:ENST00000397325:exon6:c.T420C:p.D140D,ENSG00000182870:ENST00000535228:exon7:c.T771C:p.D257D,ENSG00000182870:ENST00000328957:exon10:c.T1518C:p.D506D	NA	NA	12q24.33	NA	NA	NA	NA	rs12306514	0.74	0.74	0.735	0.766374	0.7416	0.6776	0.768	0.8464	0.774	0.74	0.65	0.75	0.82	0.7563	0.85	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.052	T	0.000	T	.	-1.194	0.075	-8.58	-3.761	-2.263	0.739	-1.19374	NA	NA	0.758129	0.852417	NA	0.522	NA	7.4106376
911	12	132682481	132682481	T	G	exonic	GALNT9	NA	synonymous SNV	GALNT9:NM_021808:exon6:c.A423C:p.G141G,GALNT9:NM_001122636:exon10:c.A1521C:p.G507G	exonic	ENSG00000182870	NA	synonymous SNV	ENSG00000182870:ENST00000541995:exon5:c.A423C:p.G141G,ENSG00000182870:ENST00000397325:exon6:c.A423C:p.G141G,ENSG00000182870:ENST00000535228:exon7:c.A774C:p.G258G,ENSG00000182870:ENST00000328957:exon10:c.A1521C:p.G507G	Score=425;Name=lod=71	NA	12q24.33	Score=808;Name=V$HEN1_02	NA	NA	NA	rs12308155	0.74	0.74	0.744	0.766374	0.7416	0.6776	0.768	0.8464	0.774	0.74	0.65	0.75	0.83	0.7566	0.85	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.035	T	0.000	T	.	-0.597	1.331	-1.31	-0.397	-3.091	1.670	-0.596836	NA	NA	0.758011	0.853024	NA	0.522	NA	7.4104556
911	16	30408765	30408765	C	T	exonic	ZNF48	NA	nonsynonymous SNV	ZNF48:NM_152652:exon2:c.C194T:p.A65V,ZNF48:NM_001214906:exon3:c.C194T:p.A65V,ZNF48:NM_001214909:exon3:c.C194T:p.A65V	exonic	ENSG00000180035	NA	nonsynonymous SNV	ENSG00000180035:ENST00000320159:exon2:c.C194T:p.A65V,ENSG00000180035:ENST00000524644:exon3:c.C194T:p.A65V,ENSG00000180035:ENST00000528032:exon3:c.C194T:p.A65V	NA	NA	16p11.2	NA	NA	NA	NA	rs12921440	0.68	0.68	0.64	0.660942	0.6392	0.9127	0.7219	0.4077	0.7229	0.66	0.91	0.71	0.41	0.6523	0.91	0.04	D	0.0	B	0.0	B	0.925	N	1.000	P	0.55	N	3.52	T	-1.056	T	0.000	T	0.414	1.441	10.76	-3.03	-0.282	.	1.120	1.440627	1.440627	0.18	0.63186	0.449477	NA	0.536	NA	7.4099734
911	11	65064690	65064690	G	A	exonic	POLA2	NA	nonsynonymous SNV	POLA2:NM_002689:exon18:c.G1747A:p.G583R	exonic	ENSG00000014138	NA	nonsynonymous SNV	ENSG00000014138:ENST00000265465:exon18:c.G1747A:p.G583R	NA	NA	11q13.1	NA	NA	NA	NA	rs487989	0.12	0.12	0.103	0.15016	0.1382	0.0645	0.1326	0.1846	0.2168	0.13	0.08	0.15	0.15	0.1435	0.17	0.41	T	0.474	P	0.039	B	0.709	N	1.000	P	1.845	L	1.9	T	-1.024	T	0.000	T	0.047	2.042	12.79	-0.784	0.040	0.736	1.044	2.042383	2.042383	0.34	0.141727	0.174693	NA	0.159	NA	7.4099064
911	11	124180477	124180477	G	A	exonic	OR8D1	NA	synonymous SNV	OR8D1:NM_001002917:exon1:c.C186T:p.F62F	exonic	ENSG00000196341	NA	synonymous SNV	ENSG00000196341:ENST00000357821:exon1:c.C186T:p.F62F	Score=417;Name=lod=66	NA	11q24.2	Score=890;Name=V$HNF3B_01	NA	NA	NA	rs6590057	0.04	0.04	0.029	0.0253594	0.0815	NA	0.0375	0.0091	0.0072	0.09	NA	0.04	0.02	0.07	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.439099	NA	NA	0.105839	0.019991	NA	0.043	NA	7.4093276
911	19	57641146	57641146	A	G	exonic	USP29	NA	nonsynonymous SNV	USP29:NM_020903:exon4:c.A1103G:p.N368S	exonic	ENSG00000131864	NA	nonsynonymous SNV	ENSG00000131864:ENST00000598197:exon1:c.A1103G:p.N368S,ENSG00000131864:ENST00000254181:exon4:c.A1103G:p.N368S	NA	NA	19q13.43	NA	NA	NA	NA	rs1027392	0.73	0.73	0.715	0.742013	0.6203	0.9276	0.7046	0.7398	0.7055	0.61	0.94	0.72	0.69	0.6783	0.94	0.35	T	0.916	P	0.497	P	0.029	N	1.000	P	0.74	N	-0.78	T	-0.946	T	0.000	T	0.007	-1.064	0.179	-0.648	-0.665	1.363	7.159	-1.064192	NA	0.38	0.627355	0.738084	NA	0.594	NA	7.4073784
911	2	206590686	206590686	T	C	exonic	NRP2	NA	synonymous SNV	NRP2:NM_003872:exon6:c.T870C:p.N290N,NRP2:NM_018534:exon6:c.T870C:p.N290N,NRP2:NM_201264:exon6:c.T870C:p.N290N,NRP2:NM_201266:exon6:c.T870C:p.N290N,NRP2:NM_201267:exon6:c.T870C:p.N290N,NRP2:NM_201279:exon6:c.T870C:p.N290N	exonic	ENSG00000118257	NA	synonymous SNV	ENSG00000118257:ENST00000272849:exon6:c.T870C:p.N290N,ENSG00000118257:ENST00000355117:exon6:c.T870C:p.N290N,ENSG00000118257:ENST00000357118:exon6:c.T870C:p.N290N,ENSG00000118257:ENST00000357785:exon6:c.T870C:p.N290N,ENSG00000118257:ENST00000360409:exon6:c.T870C:p.N290N,ENSG00000118257:ENST00000412873:exon6:c.T870C:p.N290N,ENSG00000118257:ENST00000540178:exon6:c.T870C:p.N290N,ENSG00000118257:ENST00000540841:exon6:c.T870C:p.N290N,ENSG00000118257:ENST00000417189:exon7:c.T870C:p.N290N	Score=346;Name=lod=34	NA	2q33.3	Score=824;Name=V$BRN2_01	NA	NA	NA	rs2228639	0.05	0.05	0.047	0.0397364	0.0964	0.001	0.0461	0.0333	0.0256	0.09	0.0017	0.07	0.03	0.0679	0.096	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.390264	1.390264	NA	0.09593	0.044712	NA	0.036	NA	7.4064366
911	7	157931144	157931144	C	T	exonic	PTPRN2	NA	nonsynonymous SNV	PTPRN2:NM_130842:exon6:c.G923A:p.S308N,PTPRN2:NM_002847:exon7:c.G974A:p.S325N,PTPRN2:NM_130843:exon7:c.G974A:p.S325N	exonic	ENSG00000155093	NA	nonsynonymous SNV	ENSG00000155093:ENST00000389416:exon6:c.G923A:p.S308N,ENSG00000155093:ENST00000409483:exon6:c.G860A:p.S287N,ENSG00000155093:ENST00000389413:exon7:c.G974A:p.S325N,ENSG00000155093:ENST00000389418:exon7:c.G974A:p.S325N,ENSG00000155093:ENST00000404321:exon7:c.G1043A:p.S348N	NA	NA	7q36.3	NA	NA	NA	NA	rs1130499	0.41	0.41	0.382	0.3752	0.2903	0.4663	0.4395	0.4387	0.2372	0.3	0.53	0.37	0.48	0.3414	0.53	0.15	T	0.017	B	0.022	B	.	.	1.000	P	0.895	L	3.98	T	-0.997	T	0.000	T	0.019	1.203	9.887	2.21	0.274	0.503	4.389	1.203049	NA	0.04	0.295349	0.439174	NA	0.428	NA	7.4062844
911	11	123894234	123894234	A	G	exonic	OR10G9	NA	nonsynonymous SNV	OR10G9:NM_001001953:exon1:c.A515G:p.Q172R	exonic	ENSG00000236981	NA	nonsynonymous SNV	ENSG00000236981:ENST00000375024:exon1:c.A515G:p.Q172R	NA	NA	11q24.1	NA	NA	NA	NA	rs11219413	0.29	0.29	0.234	0.312899	0.2922	0.503	0.4553	0.1407	0.2699	0.25	0.44	0.37	0.13	0.3277	0.44	0.48	T	0.0	B	0.007	B	0.604	N	1.000	P	0.38	N	8.73	T	-1.136	T	0.000	T	0.079	-1.106	0.137	-0.337	-0.180	-1.239	3.862	-1.106189	NA	0.24	0.307862	0.163789	ID=COSM147358;OCCURENCE=1(stomach)	0.304	NA	7.4055714
911	7	129479138	129479138	T	C	exonic	UBE2H	NA	synonymous SNV	UBE2H:NM_182697:exon4:c.A243G:p.L81L,UBE2H:NM_001202498:exon6:c.A126G:p.L42L,UBE2H:NM_003344:exon6:c.A336G:p.L112L	exonic	ENSG00000186591	NA	synonymous SNV	ENSG00000186591:ENST00000473814:exon4:c.A243G:p.L81L,ENSG00000186591:ENST00000355621:exon6:c.A336G:p.L112L,ENSG00000186591:ENST00000496698:exon6:c.A237G:p.L79L	Score=703;Name=lod=961	NA	7q32.2	Score=774;Name=V$PAX6_01	NA	NA	NA	rs12539800	0.06	0.06	0.05	0.0429313	0.1044	0.0397	0.0519	0.0106	0.0204	0.09	0.04	0.06	0.02	0.0647	0.092	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.459166	1.459166	NA	0.092326	0.023831	NA	0.058	NA	7.4052406
912	14	23944505	23944505	G	A	exonic	NGDN	NA	synonymous SNV	NGDN:NM_001042635:exon4:c.G270A:p.V90V,NGDN:NM_015514:exon4:c.G270A:p.V90V	exonic	ENSG00000129460	NA	synonymous SNV	ENSG00000129460:ENST00000555128:exon3:c.G195A:p.V65V,ENSG00000129460:ENST00000397154:exon4:c.G270A:p.V90V,ENSG00000129460:ENST00000408901:exon4:c.G270A:p.V90V	Score=658;Name=lod=630	NA	14q11.2	NA	NA	NA	NA	rs2236260	0.62	0.62	0.609	0.60024	0.7893	0.6379	0.6499	0.326	0.7025	0.78	0.65	0.62	0.33	0.7086	0.78	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.011	T	0.000	T	.	0.981	9.005	2.4	0.190	1.025	10.537	0.981034	NA	NA	0.763837	0.406718	NA	0.572	NA	7.4049296
912	8	142228909	142228909	G	A	exonic	SLC45A4	NA	nonsynonymous SNV	SLC45A4:NM_001080431:exon4:c.C677T:p.P226L	exonic	ENSG00000022567	NA	nonsynonymous SNV	ENSG00000022567:ENST00000024061:exon4:c.C677T:p.P226L,ENSG00000022567:ENST00000433583:exon4:c.C656T:p.P219L,ENSG00000022567:ENST00000517878:exon4:c.C830T:p.P277L,ENSG00000022567:ENST00000519067:exon4:c.C677T:p.P226L,ENSG00000022567:ENST00000520137:exon4:c.C251T:p.P84L	NA	NA	8q24.3	NA	NA	NA	NA	rs753778	0.35	0.35	0.346	0.375399	0.2942	0.4038	0.366	0.3737	0.4387	0.28	0.38	0.38	0.39	0.3508	0.39	0.2	T	0.008	B	0.004	B	0.207	N	1.000	P	1.24	L	2.47	T	-1.043	T	0.000	T	0.126	0.445	6.417	-10.6	-1.756	0.059	9.998	0.445021	NA	0.01	0.284717	0.3931	NA	0.362	NA	7.4036164
912	6	32975257	32975257	C	T	exonic	HLA-DOA	NA	synonymous SNV	HLA-DOA:NM_002119:exon3:c.G444A:p.L148L	exonic	ENSG00000204252	NA	synonymous SNV	ENSG00000204252:ENST00000229829:exon3:c.G444A:p.L148L,ENSG00000204252:ENST00000450833:exon3:c.G354A:p.L118L	Score=385;Name=lod=49	NA	6p21.32	Score=917;Name=V$USF_02	Name=ZNF263	NA	NA	rs365066	0.4	0.4	0.386	0.392173	0.4294	0.5496	0.3501	0.3071	0.3364	0.43	0.49	0.33	0.31	0.4053	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.115107	NA	0	0.430048	0.355394	NA	0.312	NA	7.4019186
912	13	42032572	42032572	T	C	exonic	RGCC	NA	synonymous SNV	RGCC:NM_014059:exon2:c.T201C:p.S67S	exonic	ENSG00000102760	NA	synonymous SNV	ENSG00000102760:ENST00000379359:exon2:c.T201C:p.S67S	Score=691;Name=lod=856	NA	13q14.11	NA	Name=SUZ12,E2F6_(H-50),E2F6	Name=43	NA	rs7136	0.58	0.58	0.595	0.556709	0.3946	0.6766	0.5447	0.7829	0.3027	0.4	0.69	0.52	0.76	0.5009	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.341988	2.341988	NA	0.369293	0.647842	NA	0.514	NA	7.4018736
912	16	21272591	21272591	G	C	exonic	CRYM	NA	synonymous SNV	CRYM:NM_001014444:exon8:c.C738G:p.T246T,CRYM:NM_001888:exon9:c.C864G:p.T288T	exonic	ENSG00000103316	NA	synonymous SNV	ENSG00000103316:ENST00000396023:exon7:c.C864G:p.T288T,ENSG00000103316:ENST00000415987:exon7:c.C738G:p.T246T,ENSG00000103316:ENST00000543948:exon8:c.C864G:p.T288T,ENSG00000103316:ENST00000219599:exon9:c.C864G:p.T288T	NA	NA	16p12.2	NA	Name=NF-YA,TAF1,MafF_(M8194),TCF4,Pol2,eGFP-JunD,FOSL1_(SC-183),NF-YB,JunD,FOSL2,RFX5_(N-494),HDAC2_(SC-6296),c-Fos,c-Jun,HEY1,MafK_(ab50322),eGFP-FOS,TBP	Name=118	NA	rs14122	0.48	0.48	0.506	0.502596	0.4016	0.2966	0.4179	0.826	0.4417	0.43	0.3	0.41	0.8	0.45	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.074823	NA	NA	0.415116	0.758981	NA	0.543	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000037221.1;CLNDSDB=.;CLNDSDBID=.	7.3999506
912	2	44547574	44547574	G	A	exonic	SLC3A1	NA	nonsynonymous SNV	SLC3A1:NM_000341:exon10:c.G1854A:p.M618I	exonic	ENSG00000138079	NA	nonsynonymous SNV	ENSG00000138079:ENST00000409740:exon4:c.G747A:p.M249I,ENSG00000138079:ENST00000409380:exon7:c.G1020A:p.M340I,ENSG00000138079:ENST00000260649:exon10:c.G1854A:p.M618I	NA	NA	2p21	NA	Name=MafK_(ab50322)	NA	NA	rs698761	0.46	0.46	0.455	0.460863	0.661	0.3214	0.5447	0.2126	0.6748	0.65	0.35	0.57	0.2	0.596	0.68	0.78	T	0.001	B	0.001	B	0.120	N	1.000	P	1.095	L	-4.41	D	-0.903	T	0.000	T	0.046	0.686	7.667	-1.37	0.140	-0.163	2.100	0.686183	NA	0.33	0.676395	0.288243	NA	0.514	NA	7.3999384
912	12	6428116	6428116	T	G	intronic	PLEKHG6	NA	NA	NA	exonic	ENSG00000008323	NA	nonsynonymous SNV	ENSG00000008323:ENST00000536531:exon12:c.T1481G:p.I494S	NA	NA	12p13.31	NA	NA	Name=3	NA	rs4764497	0.44	0.44	0.463	0.403355	0.6223	0.3046	0.3631	0.3207	0.4202	0.63	0.32	0.43	0.31	0.5334	0.63	.	.	0.02	B	0.025	B	.	.	1.000	P	.	.	0.1	T	-0.924	T	0.000	T	0.046	0.509	6.758	-7.13	-1.107	-0.807	0.765	0.508646	NA	NA	0.611279	0.365638	NA	0.413	NA	7.3996877
912	6	31239518	31239518	C	T	exonic	HLA-C	NA	synonymous SNV	HLA-C:NM_001243042:exon2:c.G201A:p.P67P,HLA-C:NM_002117:exon2:c.G201A:p.P67P	exonic	ENSG00000204525	NA	synonymous SNV	ENSG00000204525:ENST00000376228:exon2:c.G201A:p.P67P,ENSG00000204525:ENST00000376237:exon2:c.G201A:p.P67P,ENSG00000204525:ENST00000383329:exon2:c.G201A:p.P67P	NA	NA	6p21.33	NA	Name=Pol2-4H8,RFX5_(N-494),Pol2,CTCF	Name=31	NA	rs1050420	0.42	0.42	0.361	0.445288	0.4314	0.2808	0.513	0.5363	0.4581	0.42	0.27	0.54	0.5	0.4234	0.54	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-1.016	T	0.029	T	.	0.54	6.921	-0.177	-0.051	-0.011	3.289	0.539543	NA	NA	0.412602	0.479801	NA	0.109	NA	7.3992646
912	14	94563265	94563265	C	T	UTR5	IFI27L1	NM_145249:c.-19C>T,NM_206949:c.-19C>T	NA	NA	exonic	ENSG00000165948	NA	stopgain	ENSG00000165948:ENST00000553664:exon3:c.C49T:p.R17X	NA	NA	14q32.12	NA	NA	NA	NA	rs79237142	0.05	0.05	0.04	0.0363419	0.0994	0.001	0.0375	0.031	0.0143	0.11	NA	0.02	0.03	0.0796	0.11	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	2.68	14.92	-1.34	-0.996	-2.029	.	2.679971	2.679971	NA	0.088953	0.043123	NA	0.101	NA	7.3987137
912	5	70800538	70800538	G	A	exonic	BDP1	NA	nonsynonymous SNV	BDP1:NM_018429:exon16:c.G2332A:p.V778M	exonic	ENSG00000145734	NA	nonsynonymous SNV	ENSG00000145734:ENST00000358731:exon16:c.G2332A:p.V778M	NA	NA	5q13.2	NA	NA	NA	NA	rs3761967	0.42	0.42	0.415	0.432708	0.4911	0.379	0.3444	0.385	0.5552	0.5	0.39	0.35	0.38	0.4618	0.5	0.16	T	0.655	P	0.231	B	0.036	N	1.000	P	1.39	L	2.58	T	-0.948	T	0.000	T	0.029	-0.46	1.874	-3.44	-0.485	-0.015	1.310	-0.459559	NA	0.12	0.481903	0.371732	NA	0.406	NA	7.3985304
912	21	47831309	47831309	G	A	exonic	PCNT	NA	synonymous SNV	PCNT:NM_006031:exon28:c.G5322A:p.E1774E	exonic	ENSG00000160299	NA	synonymous SNV	ENSG00000160299:ENST00000359568:exon28:c.G5322A:p.E1774E	Score=346;Name=lod=34	NA	21q22.3	NA	NA	Name=3	NA	rs58559714	0.16	0.16	0.175	0.178714	0.0895	0.004	0.0937	0.4902	0.09	0.09	0.0035	0.1	0.48	0.1035	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.230566	NA	NA	0.075233	0.436904	NA	0.174	NA	7.3984336
912	1	247320258	247320258	A	G	exonic	ZNF124	NA	synonymous SNV	ZNF124:NM_003431:exon4:c.T480C:p.H160H	exonic	ENSG00000196418	NA	synonymous SNV	ENSG00000196418:ENST00000340684:exon4:c.T480C:p.H160H,ENSG00000196418:ENST00000543802:exon4:c.T666C:p.H222H	NA	NA	1q44	NA	Name=ZNF274,SETDB1,KAP1,ETS1	Name=23	NA	rs41304032	0.1	0.1	0.085	0.095647	0.0795	0.001	0.1686	0.1982	0.0194	0.08	0.0017	0.17	0.19	0.0935	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.816417	NA	NA	0.095465	0.192011	NA	0.087	NA	7.3982016
912	15	76067987	76067987	A	G	intergenic	MIR4313,UBE2Q2	dist=13331;dist=67635	NA	NA	ncRNA_exonic	ENSG00000187812	NA	NA	NA	Score=410;Name=lod=62	NA	15q24.2	NA	Name=Pol2,TCF4,HEY1,TBP	NA	NA	rs34243492	0.25	0.25	0.196	0.249002	0.3042	0.2391	0.3602	0.149	0.2587	0.32	0.2	0.33	0.15	0.2984	0.33	1	T	0.0	B	0.001	B	.	.	.	.	.	.	.	.	-0.966	T	0.000	T	.	0.501	6.719	0.756	-0.118	3.368	5.304	0.501314	NA	1	NA	NA	NA	0.29	NA	7.3974
912	7	53103554	53103554	C	G	exonic	POM121L12	NA	nonsynonymous SNV	POM121L12:NM_182595:exon1:c.C190G:p.Q64E	exonic	ENSG00000221900	NA	nonsynonymous SNV	ENSG00000221900:ENST00000408890:exon1:c.C190G:p.Q64E	NA	NA	7p12.1	NA	NA	NA	NA	rs11238247	0.37	0.37	0.348	0.335463	0.4861	0.3095	0.4323	0.1921	0.3323	0.49	0.31	0.43	0.21	0.4415	0.51	0.02	D	0.815	P	0.168	B	.	.	1.000	P	0	N	1.91	T	-0.941	T	0.000	T	0.058	0.518	6.806	1.11	0.903	0.130	5.576	0.51776	NA	0.01	0.509054	0.219023	NA	0.37	NA	7.3966794
912	3	141326602	141326602	T	C	exonic	RASA2	NA	synonymous SNV	RASA2:NM_006506:exon20:c.T2016C:p.N672N	exonic	ENSG00000155903	NA	synonymous SNV	ENSG00000155903:ENST00000286364:exon20:c.T2016C:p.N672N,ENSG00000155903:ENST00000452898:exon20:c.T2019C:p.N673N	Score=625;Name=lod=461	NA	3q23	Score=802;Name=V$IRF2_01	NA	NA	NA	rs295322	0.18	0.18	0.177	0.173323	0.0656	0.2133	0.2464	0.2526	0.0838	0.06	0.24	0.21	0.27	0.1398	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.639152	1.639152	NA	0.065694	0.208182	ID=COSM149481;OCCURENCE=1(stomach)	0.123	NA	7.3955726
912	14	91636532	91636532	C	T	exonic;splicing	C14orf159;C14orf159	NM_001102369:exon7:c.441+2C>T,NM_001102366:exon7:c.441+2C>T,NM_024952:exon5:c.441+2C>T,NM_001102367:exon6:c.441+2C>T	nonsynonymous SNV	C14orf159:NM_001102368:exon5:c.C443T:p.A148V	exonic;splicing	ENSG00000133943;ENSG00000133943	ENST00000520328:exon7:c.441+2C>T,ENST00000523816:exon7:c.441+2C>T,ENST00000428926:exon5:c.441+2C>T,ENST00000522322:exon6:c.441+2C>T,ENST00000523771:exon5:c.441+2C>T	nonsynonymous SNV	ENSG00000133943:ENST00000522170:exon4:c.C443T:p.A148V,ENSG00000133943:ENST00000256324:exon5:c.C443T:p.A148V,ENSG00000133943:ENST00000521334:exon5:c.C443T:p.A148V,ENSG00000133943:ENST00000523894:exon5:c.C443T:p.A148V,ENSG00000133943:ENST00000412671:exon6:c.C443T:p.A148V,ENSG00000133943:ENST00000517518:exon6:c.C443T:p.A148V,ENSG00000133943:ENST00000525393:exon6:c.C56T:p.A19V,ENSG00000133943:ENST00000519950:exon7:c.C443T:p.A148V,ENSG00000133943:ENST00000521077:exon7:c.C443T:p.A148V,ENSG00000133943:ENST00000518868:exon8:c.C443T:p.A148V	NA	NA	14q32.11	NA	NA	NA	NA	rs4900072	0.19	0.19	0.159	0.167133	0.3241	0.0585	0.2262	0.1036	0.1616	0.33	0.06	0.24	0.1	0.277	0.34	1	T	0.443	B	0.23	B	0.435	N	1.000	P	-0.935	N	1.55	T	-1.085	T	0.000	T	0.245	-0.602	1.312	-5.0	-0.830	-0.492	2.801	-0.601802	NA	1	0.33686	0.161371	NA	0.29	NA	7.3953734
912	20	62070966	62070966	G	A	exonic	KCNQ2	NA	synonymous SNV	KCNQ2:NM_004518:exon6:c.C912T:p.F304F,KCNQ2:NM_172106:exon6:c.C912T:p.F304F,KCNQ2:NM_172107:exon6:c.C912T:p.F304F,KCNQ2:NM_172108:exon6:c.C912T:p.F304F,KCNQ2:NM_172109:exon6:c.C912T:p.F304F	exonic	ENSG00000075043	NA	synonymous SNV	ENSG00000075043:ENST00000344425:exon6:c.C912T:p.F304F,ENSG00000075043:ENST00000344462:exon6:c.C912T:p.F304F,ENSG00000075043:ENST00000354587:exon6:c.C912T:p.F304F,ENSG00000075043:ENST00000357249:exon6:c.C912T:p.F304F,ENSG00000075043:ENST00000359125:exon6:c.C912T:p.F304F,ENSG00000075043:ENST00000359689:exon6:c.C912T:p.F304F,ENSG00000075043:ENST00000360480:exon6:c.C912T:p.F304F,ENSG00000075043:ENST00000370221:exon6:c.C912T:p.F304F,ENSG00000075043:ENST00000370222:exon6:c.C912T:p.F304F,ENSG00000075043:ENST00000370224:exon6:c.C912T:p.F304F,ENSG00000075043:ENST00000370226:exon6:c.C912T:p.F304F,ENSG00000075043:ENST00000430658:exon6:c.C912T:p.F304F	Score=507;Name=lod=153	NA	20q13.33	NA	NA	NA	NA	rs2297385	0.18	0.18	0.158	0.167931	0.0895	0.4792	0.1614	0.0061	0.1513	0.09	0.47	0.17	0.01	0.1146	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.660947	NA	NA	0.067326	0.021335	NA	0.101	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117349.1;CLNDSDB=.;CLNDSDBID=.	7.3952406
912	16	75574030	75574030	C	T	exonic	TMEM231	NA	synonymous SNV	TMEM231:NM_001077416:exon6:c.G972A:p.V324V,TMEM231:NM_001077418:exon7:c.G813A:p.V271V	exonic	ENSG00000205084	NA	synonymous SNV	ENSG00000205084:ENST00000398114:exon6:c.G900A:p.V300V,ENSG00000205084:ENST00000565067:exon6:c.G669A:p.V223V,ENSG00000205084:ENST00000258173:exon7:c.G813A:p.V271V	Score=643;Name=lod=548	NA	16q23.1	NA	NA	NA	NA	rs2242406	0.26	0.26	0.216	0.270168	0.0437	0.7034	0.3429	0.0068	0.3609	0.04	0.74	0.31	0.01	0.174	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.63738	NA	NA	0.053831	0.022211	NA	0.13	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118632.2;CLNDSDB=.;CLNDSDBID=.	7.3951356
913	5	52351377	52351377	T	C	exonic	ITGA2	NA	synonymous SNV	ITGA2:NM_002203:exon8:c.T789C:p.A263A	exonic	ENSG00000164171	NA	synonymous SNV	ENSG00000164171:ENST00000296585:exon8:c.T789C:p.A263A,ENSG00000164171:ENST00000509814:exon8:c.T789C:p.A263A,ENSG00000164171:ENST00000509960:exon8:c.T789C:p.A263A,ENSG00000164171:ENST00000510722:exon8:c.T789C:p.A263A	Score=405;Name=lod=59	NA	5q11.2	NA	Name=MafK_(SC-477),MafF_(M8194),MafK_(ab50322)	NA	NA	rs1139484	0.1	0.1	0.11	0.0976438	0.0895	0.0317	0.0605	0.1717	0.1002	0.09	0.03	0.05	0.22	0.0867	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.761306	NA	NA	0.095581	0.159101	NA	0.094	NA	7.3948856
913	8	77767797	77767797	C	T	exonic	ZFHX4	NA	synonymous SNV	ZFHX4:NM_024721:exon10:c.C8640T:p.G2880G	exonic	ENSG00000091656	NA	synonymous SNV	ENSG00000091656:ENST00000518282:exon9:c.C8562T:p.G2854G,ENSG00000091656:ENST00000050961:exon10:c.C8505T:p.G2835G,ENSG00000091656:ENST00000455469:exon10:c.C8505T:p.G2835G,ENSG00000091656:ENST00000521891:exon10:c.C8640T:p.G2880G	Score=428;Name=lod=73	NA	8q21.11	NA	Name=YY1	NA	NA	rs16939379	0.2	0.2	0.229	0.222644	0.0795	0.0218	0.1124	0.643	0.0869	0.08	0.03	0.13	0.62	0.114	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.30601	NA	NA	0.078384	0.508996	NA	0.21	NA	7.3947826
913	22	38273749	38273749	T	C	exonic	EIF3L	NA	synonymous SNV	EIF3L:NM_001242923:exon9:c.T1002C:p.I334I,EIF3L:NM_016091:exon11:c.T1146C:p.I382I	exonic	ENSG00000100129	NA	synonymous SNV	ENSG00000100129:ENST00000381683:exon9:c.T1002C:p.I334I,ENSG00000100129:ENST00000406934:exon9:c.T852C:p.I284I,ENSG00000100129:ENST00000412331:exon11:c.T1146C:p.I382I	Score=677;Name=lod=753	NA	22q13.1	Score=807;Name=V$CDPCR3_01	NA	NA	Score=85;Name=1498834_1_-_85	rs9466	0.4	0.4	0.395	0.402955	0.4215	0.1815	0.4294	0.534	0.4162	0.43	0.19	0.49	0.55	0.4243	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.021991	NA	NA	0.426395	0.514753	NA	0.428	NA	7.3944716
913	12	93196422	93196422	T	G	exonic	EEA1	NA	nonsynonymous SNV	EEA1:NM_003566:exon19:c.A2428C:p.K810Q	exonic	ENSG00000102189	NA	nonsynonymous SNV	ENSG00000102189:ENST00000322349:exon19:c.A2428C:p.K810Q	NA	NA	12q22	NA	NA	NA	NA	rs10745623	0.7	0.7	0.658	0.705471	0.6292	0.9405	0.7752	0.4887	0.7853	0.63	0.94	0.77	0.5	0.6842	0.94	0.33	T	0.012	B	0.006	B	0.460	N	1.000	P	0	N	-1.08	T	-1.012	T	0.000	T	0.076	-0.781	0.729	-7.99	-1.421	-0.160	9.037	-0.780529	NA	0.64	0.625698	0.525897	NA	0.616	NA	7.3942354
913	6	102503317	102503317	G	A	exonic	GRIK2	NA	synonymous SNV	GRIK2:NM_001166247:exon15:c.G2424A:p.E808E,GRIK2:NM_021956:exon15:c.G2424A:p.E808E,GRIK2:NM_175768:exon15:c.G2424A:p.E808E	exonic	ENSG00000164418	NA	synonymous SNV	ENSG00000164418:ENST00000369137:exon14:c.G2196A:p.E732E,ENSG00000164418:ENST00000318991:exon15:c.G2424A:p.E808E,ENSG00000164418:ENST00000369134:exon15:c.G2277A:p.E759E,ENSG00000164418:ENST00000369138:exon15:c.G2424A:p.E808E,ENSG00000164418:ENST00000413795:exon15:c.G2424A:p.E808E,ENSG00000164418:ENST00000421544:exon15:c.G2424A:p.E808E	Score=705;Name=lod=977	NA	6q16.3	Score=740;Name=V$SRF_01	NA	NA	NA	rs2227283	0.38	0.38	0.365	0.327476	0.4414	0.3601	0.4107	0.2375	0.2393	0.46	0.35	0.42	0.25	0.3913	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.937627	NA	NA	0.440581	0.280754	NA	0.486	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117164.2;CLNDSDB=.;CLNDSDBID=.	7.3933856
913	1	242042545	242042545	A	G	exonic	EXO1	NA	nonsynonymous SNV	EXO1:NM_003686:exon11:c.A2009G:p.E670G,EXO1:NM_006027:exon11:c.A2009G:p.E670G,EXO1:NM_130398:exon13:c.A2009G:p.E670G	exonic	ENSG00000174371	NA	nonsynonymous SNV	ENSG00000174371:ENST00000348581:exon11:c.A2009G:p.E670G,ENSG00000174371:ENST00000518483:exon11:c.A2009G:p.E670G,ENSG00000174371:ENST00000366548:exon13:c.A2009G:p.E670G	NA	NA	1q43	NA	NA	NA	NA	rs1776148	0.71	0.71	0.698	0.681909	0.6511	0.8085	0.6859	0.6884	0.5716	0.65	0.82	0.69	0.67	0.6573	0.82	0.39	T	0.0	B	0.0	B	0.025	N	1.000	P	0	N	1.44	T	-1.000	T	0.000	T	0.206	0.75	7.974	-5.51	-1.474	-0.907	2.518	0.749628	NA	0.4	0.631744	0.700409	NA	0.732	NA	7.3931894
913	13	31495179	31495179	G	A	exonic	MEDAG	NA	synonymous SNV	MEDAG:NM_032849:exon3:c.G417A:p.T139T	exonic	ENSG00000102802	NA	synonymous SNV	ENSG00000102802:ENST00000380482:exon3:c.G417A:p.T139T	Score=590;Name=lod=334	NA	13q12.3	NA	NA	NA	NA	rs11841583	0.11	0.11	0.098	0.112021	0.1004	0.0149	0.1239	0.2186	0.0716	0.11	0.02	0.12	0.22	0.0925	0.22	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.040	T	0.000	T	.	1.101	9.492	1.28	0.038	0.002	5.498	1.100926	NA	NA	0.08186	0.199501	NA	0.217	NA	7.3919066
913	17	67212423	67212423	G	A	exonic	ABCA10	NA	nonsynonymous SNV	ABCA10:NM_080282:exon8:c.C607T:p.P203S	exonic	ENSG00000154263	NA	nonsynonymous SNV	ENSG00000154263:ENST00000518929:exon5:c.C607T:p.P203S,ENSG00000154263:ENST00000523419:exon5:c.C607T:p.P203S,ENSG00000154263:ENST00000522406:exon7:c.C607T:p.P203S,ENSG00000154263:ENST00000269081:exon8:c.C607T:p.P203S,ENSG00000154263:ENST00000416101:exon8:c.C607T:p.P203S,ENSG00000154263:ENST00000432313:exon8:c.C607T:p.P203S	NA	NA	17q24.3	NA	NA	NA	NA	rs9909216	0.54	0.54	0.532	0.580671	0.663	0.3492	0.6037	0.6422	0.635	0.66	0.3	0.57	0.6	0.6209	0.66	0.87	T	0.013	B	0.029	B	0.915	U	1.000	P	-0.11	N	-2.24	D	-0.965	T	0.000	T	0.067	0.141	4.757	2.35	0.585	0.179	9.052	0.140764	NA	0.04	0.657674	0.649342	NA	0.558	NA	7.3917594
913	13	44457984	44457984	A	G	exonic	LACC1	NA	synonymous SNV	LACC1:NM_001128303:exon4:c.A819G:p.R273R,LACC1:NM_153218:exon4:c.A819G:p.R273R	exonic	ENSG00000179630	NA	synonymous SNV	ENSG00000179630:ENST00000325686:exon4:c.A819G:p.R273R,ENSG00000179630:ENST00000441843:exon4:c.A819G:p.R273R	Score=624;Name=lod=456	NA	13q14.11	NA	NA	Name=20	NA	rs9533673	0.07	0.07	0.058	0.0646965	0.1014	NA	0.0793	0.1029	0.0317	0.09	NA	0.07	0.11	0.0753	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.405482	1.405482	NA	0.101279	0.108034	NA	0.072	NA	7.3886876
913	7	150934975	150934975	C	G	exonic	CHPF2	NA	synonymous SNV	CHPF2:NM_019015:exon4:c.C1527G:p.A509A	exonic	ENSG00000033100	NA	synonymous SNV	ENSG00000033100:ENST00000035307:exon4:c.C1527G:p.A509A,ENSG00000033100:ENST00000495645:exon5:c.C1503G:p.A501A	Score=419;Name=lod=67	NA	7q36.1	NA	Name=CTCF	Name=4	NA	rs2487154	0.47	0.47	0.402	0.433506	0.4503	0.7153	0.4164	0.2685	0.3609	0.45	0.68	0.43	0.27	0.4197	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.615307	NA	NA	0.408234	0.296322	NA	0.391	NA	7.3884326
913	12	11183255	11183255	G	A	exonic	TAS2R31	NA	nonsynonymous SNV	TAS2R31:NM_176885:exon1:c.C680T:p.A227V	exonic	ENSG00000256436	NA	nonsynonymous SNV	ENSG00000256436:ENST00000390675:exon1:c.C680T:p.A227V	NA	NA	12p13.2	NA	NA	NA	NA	rs10845293	0.4	0.4	0.407	0.34984	0.505	0.1944	0.464	0.3593	0.2566	0.53	0.23	0.43	0.37	0.4402	0.53	0.11	T	0.628	P	0.434	B	.	.	1.000	P	2.18	M	4.91	T	-1.039	T	0.000	T	0.083	1.152	9.691	1.42	-0.014	0.847	8.035	1.151811	NA	NA	0.499884	0.374943	NA	0.29	NA	7.3882494
913	6	109767931	109767931	C	T	exonic	MICAL1	NA	nonsynonymous SNV	MICAL1:NM_001159291:exon17:c.G2014A:p.A672T,MICAL1:NM_022765:exon18:c.G2272A:p.A758T	exonic	ENSG00000135596	NA	nonsynonymous SNV	ENSG00000135596:ENST00000358577:exon17:c.G2014A:p.A672T,ENSG00000135596:ENST00000358807:exon18:c.G2272A:p.A758T,ENSG00000135596:ENST00000368952:exon18:c.G2329A:p.A777T	NA	NA	6q21	NA	NA	NA	NA	rs59056467	0.31	0.31	0.201	0.311302	0.3519	0.3482	0.3156	0.1936	0.3875	0.33	0.39	0.31	0.17	0.3367	0.39	0.48	T	0.004	B	0.001	B	0.350	N	1.000	P	0	N	0.7	T	-1.007	T	0.021	T	0.087	0.899	8.656	2.43	0.720	0.504	5.107	0.899389	NA	0.09	0.256512	0.165229	NA	NA	NA	7.3882214
913	17	7320581	7320581	C	T	exonic	NLGN2	NA	synonymous SNV	NLGN2:NM_020795:exon7:c.C1971T:p.P657P	exonic	ENSG00000169992	NA	synonymous SNV	ENSG00000169992:ENST00000302926:exon7:c.C1971T:p.P657P,ENSG00000169992:ENST00000575301:exon8:c.C1971T:p.P657P	Score=358;Name=lod=38	NA	17p13.1	Score=792;Name=V$ARP1_01	NA	NA	NA	rs78081080	0.05	0.05	0.056	0.0660942	0.0895	0.0397	0.0735	0.0061	0.1452	0.09	0.03	0.07	0.01	0.1174	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.702667	NA	NA	0.072187	0.016667	NA	0.029	NA	7.3875796
913	2	241722445	241722445	G	A	intronic	KIF1A	NA	NA	NA	intronic	ENSG00000130294	NA	NA	NA	NA	NA	2q37.3	NA	NA	NA	NA	rs2288750	0.3	0.3	0.336	0.288339	0.1869	0.3403	0.2493	0.4864	0.0992	0.18	0.36	0.22	0.46	0.2229	0.46	0	D	.	.	.	.	0.065	U	1.000	P	.	.	.	.	-0.983	T	0.000	T	.	-0.697	0.98	-4.87	-1.345	-0.915	5.922	-0.697471	NA	NA	0.203023	0.422445	NA	0.333	NA	7.387177
913	7	99954393	99954393	G	A	intergenic	PMS2P1,PILRB	dist=20463;dist=1233	NA	NA	exonic	ENSG00000121716	NA	nonsynonymous SNV	ENSG00000121716:ENST00000448382:exon5:c.G170A:p.R57Q,ENSG00000121716:ENST00000455145:exon5:c.G170A:p.R57Q	NA	NA	7q22.1	NA	NA	NA	NA	rs6946768	0.09	0.09	0.084	0.0816693	0.1759	0.0278	0.0937	0.0242	0.1094	0.18	0.02	0.09	0.02	0.2706	0.18	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-1.021	T	0.000	T	0.072	1.36	10.47	-4.36	-0.962	-0.369	5.715	1.359654	1.359654	0.26	NA	NA	NA	0.094	NA	7.3868334
913	15	71184495	71184495	A	G	exonic	THAP10	NA	synonymous SNV	THAP10:NM_020147:exon1:c.T117C:p.G39G	exonic	ENSG00000129028	NA	synonymous SNV	ENSG00000129028:ENST00000249861:exon1:c.T117C:p.G39G	Score=451;Name=lod=91	NA	15q23	NA	Name=YY1_(C-20),PU.1	Name=144	NA	rs2955035	0.51	0.51	0.518	0.545927	0.4066	0.5833	0.2968	0.7595	0.5389	0.41	0.6	0.32	0.73	0.4679	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.356135	1.356135	NA	0.405588	0.69768	NA	0.536	NA	7.3865786
913	9	139916833	139916833	T	G	exonic	ABCA2	NA	synonymous SNV	ABCA2:NM_001606:exon6:c.A537C:p.A179A,ABCA2:NM_212533:exon6:c.A627C:p.A209A	exonic	ENSG00000107331	NA	synonymous SNV	ENSG00000107331:ENST00000371605:exon5:c.A534C:p.A178A,ENSG00000107331:ENST00000459850:exon5:c.A624C:p.A208A,ENSG00000107331:ENST00000487109:exon5:c.A624C:p.A208A,ENSG00000107331:ENST00000265662:exon6:c.A537C:p.A179A,ENSG00000107331:ENST00000341511:exon6:c.A537C:p.A179A	NA	NA	9q34.3	NA	Name=TBP,IRF1,HMGN3,eGFP-JunD,NRSF,Pol2	Name=119	NA	rs35590326	0.09	0.09	0.099	0.091853	0.0994	0.0317	0.0937	0.1732	0.0348	0.08	0.03	0.08	0.16	0.0947	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.297247	NA	NA	0.086149	0.187191	ID=COSM455628;OCCURENCE=1(breast)	0.181	NA	7.3864176
913	1	35260769	35260769	C	T	exonic	GJA4	NA	nonsynonymous SNV	GJA4:NM_002060:exon2:c.C955T:p.P319S	exonic	ENSG00000187513	NA	nonsynonymous SNV	ENSG00000187513:ENST00000342280:exon2:c.C955T:p.P319S	NA	NA	1p34.3	NA	NA	NA	NA	rs1764391	0.33	0.33	0.353	0.333666	0.332	0.1726	0.2723	0.5847	0.2055	0.33	0.19	0.3	0.54	0.3134	0.54	0.2	T	0.0	B	0.0	B	0.088	N	1.000	P	-1.1	N	-4.25	D	-0.943	T	0.000	T	0.025	-1.249	0.051	0.013	0.237	0.155	5.862	-1.249319	NA	0.76	0.302674	0.52542	NA	0.283	NA	7.3852594
913	8	144993069	144993069	G	A	exonic	PLEC	NA	synonymous SNV	PLEC:NM_201378:exon32:c.C10878T:p.Y3626Y,PLEC:NM_201379:exon32:c.C10854T:p.Y3618Y,PLEC:NM_201380:exon32:c.C11331T:p.Y3777Y,PLEC:NM_201381:exon32:c.C10824T:p.Y3608Y,PLEC:NM_201382:exon32:c.C10920T:p.Y3640Y,PLEC:NM_201383:exon32:c.C10932T:p.Y3644Y,PLEC:NM_201384:exon32:c.C10920T:p.Y3640Y,PLEC:NM_000445:exon33:c.C11001T:p.Y3667Y	exonic	ENSG00000178209	NA	synonymous SNV	ENSG00000178209:ENST00000322810:exon32:c.C11331T:p.Y3777Y,ENSG00000178209:ENST00000345136:exon32:c.C10920T:p.Y3640Y,ENSG00000178209:ENST00000354589:exon32:c.C10920T:p.Y3640Y,ENSG00000178209:ENST00000354958:exon32:c.C10854T:p.Y3618Y,ENSG00000178209:ENST00000356346:exon32:c.C10878T:p.Y3626Y,ENSG00000178209:ENST00000357649:exon32:c.C10932T:p.Y3644Y,ENSG00000178209:ENST00000398774:exon32:c.C10824T:p.Y3608Y,ENSG00000178209:ENST00000527096:exon32:c.C10989T:p.Y3663Y,ENSG00000178209:ENST00000436759:exon33:c.C11001T:p.Y3667Y	Score=473;Name=lod=112	NA	8q24.3	NA	NA	NA	NA	rs28455570	0.05	0.05	0.044	0.0333466	0.1173	0.001	0.0375	0.0015	0.0204	0.11	0.0017	0.05	0.0041	0.0681	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.252729	NA	NA	0.09609	0.020648	NA	0.014	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117943.2;CLNDSDB=.;CLNDSDBID=.	7.3851766
914	16	15131974	15131974	G	T	exonic	NTAN1	NA	nonsynonymous SNV	NTAN1:NM_001270767:exon8:c.C532A:p.H178N,NTAN1:NM_001270766:exon9:c.C532A:p.H178N,NTAN1:NM_173474:exon10:c.C847A:p.H283N	exonic	ENSG00000157045	NA	nonsynonymous SNV	ENSG00000157045:ENST00000287706:exon10:c.C847A:p.H283N	NA	Name=Height	16p13.11	NA	NA	NA	NA	rs1136001	0.33	0.33	0.283	0.343251	0.3072	0.3661	0.5331	0.1838	0.4376	0.32	0.38	0.48	0.19	0.3409	0.48	0.5	T	0.0	B	0.0	B	0.009	N	1.000	P	-0.805	N	1.65	T	-0.912	T	0.000	T	0.018	-0.522	1.619	1.84	-0.026	0.598	6.911	-0.522108	NA	0.7	0.300349	0.225762	NA	0.406	NA	7.3848844
914	9	90322023	90322023	G	A	exonic	DAPK1	NA	nonsynonymous SNV	DAPK1:NM_004938:exon26:c.G4037A:p.S1346N	exonic	ENSG00000196730	NA	nonsynonymous SNV	ENSG00000196730:ENST00000491893:exon24:c.G3839A:p.S1280N,ENSG00000196730:ENST00000358077:exon26:c.G4037A:p.S1346N,ENSG00000196730:ENST00000408954:exon26:c.G4037A:p.S1346N,ENSG00000196730:ENST00000472284:exon26:c.G4037A:p.S1346N,ENSG00000196730:ENST00000469640:exon27:c.G4112A:p.S1371N	NA	NA	9q21.33	NA	NA	NA	NA	rs1056719	0.64	0.64	0.629	0.65595	0.6372	0.8323	0.6974	0.3986	0.8119	0.64	0.83	0.68	0.39	0.6672	0.83	0.6	T	0.0	B	0.0	B	0.026	N	1.000	P	-0.37	N	-1.98	D	-0.943	T	0.000	T	0.009	-2.141	0.005	-2.04	-0.509	0.776	12.608	-2.140561	NA	0.21	0.645457	0.461268	NA	0.601	NA	7.3834764
914	11	124294703	124294703	T	C	exonic	OR8B4	NA	nonsynonymous SNV	OR8B4:NM_001005196:exon1:c.A65G:p.E22G	exonic	ENSG00000198657	NA	nonsynonymous SNV	ENSG00000198657:ENST00000356130:exon1:c.A65G:p.E22G	NA	NA	11q24.2	NA	NA	NA	NA	rs10750270	0.38	0.38	0.35	0.346446	0.3121	0.5952	0.3242	0.2874	0.2209	0.31	0.62	0.35	0.25	0.3273	0.62	0.19	T	0.006	B	0.012	B	0.022	N	1.000	P	1.215	L	7.4	T	-1.112	T	0.000	T	0.093	-0.312	2.515	2.16	0.337	0.167	11.163	-0.312118	NA	0.17	0.311119	0.274648	NA	0.217	NA	7.3828144
914	12	109883374	109883374	T	C	exonic	MYO1H	NA	nonsynonymous SNV	MYO1H:NM_001101421:exon30:c.T3002C:p.L1001P	exonic	ENSG00000174527	NA	nonsynonymous SNV	ENSG00000174527:ENST00000543960:exon4:c.T314C:p.L105P,ENSG00000174527:ENST00000431443:exon30:c.T3032C:p.L1011P,ENSG00000174527:ENST00000310903:exon31:c.T3002C:p.L1001P	NA	NA	12q24.11	NA	NA	Name=68	NA	rs3825393	0.67	0.67	0.684	0.704673	0.6491	0.4821	0.5591	0.9803	0.7219	0.65	0.48	0.58	0.97	0.6584	0.97	1	T	0.0	B	0.0	B	.	.	0.997	P	-1.845	N	1.36	T	-0.989	T	0.000	T	0.131	1.432	10.73	2.79	0.402	0.012	8.431	1.432156	1.432156	0.35	0.643852	0.920141	NA	0.761	NA	7.3819814
914	3	195778972	195778972	C	T	exonic	TFRC	NA	synonymous SNV	TFRC:NM_001128148:exon19:c.G2124A:p.T708T,TFRC:NM_003234:exon19:c.G2124A:p.T708T	exonic	ENSG00000072274	NA	synonymous SNV	ENSG00000072274:ENST00000535031:exon17:c.G1278A:p.T426T,ENSG00000072274:ENST00000420415:exon18:c.G1881A:p.T627T,ENSG00000072274:ENST00000360110:exon19:c.G2124A:p.T708T,ENSG00000072274:ENST00000392396:exon19:c.G2124A:p.T708T	Score=409;Name=lod=61	NA	3q29	NA	Name=Pol2-4H8,PU.1,Pol2(phosphoS2)	NA	NA	rs1805051	0.05	0.05	0.037	0.0483227	0.0875	0.002	0.0706	0.003	0.1012	0.09	NA	0.09	0.01	0.0895	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.79406	NA	NA	0.107907	0.019519	NA	0.094	NA	7.3817596
914	21	37507769	37507769	C	T	exonic	CBR3	NA	synonymous SNV	CBR3:NM_001236:exon1:c.C279T:p.V93V	exonic	ENSG00000159231	NA	synonymous SNV	ENSG00000159231:ENST00000290354:exon1:c.C279T:p.V93V	Score=554;Name=lod=238	NA	21q22.12	Score=733;Name=V$NRSF_01	Name=HA-E2F1,E2F1,ZNF263,E2F6,Pol2	NA	NA	rs881712	0.35	0.35	0.351	0.308506	0.4304	0.4276	0.4524	0.0673	0.2843	0.44	0.43	0.42	0.08	0.4123	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.698868	NA	NA	0.44301	0.136178	NA	0.384	NA	7.3809566
914	7	154379517	154379517	C	T	intronic	DPP6	NA	NA	NA	exonic	ENSG00000130226	NA	nonsynonymous SNV	ENSG00000130226:ENST00000406326:exon6:c.C785T:p.S262L	NA	NA	7q36.2	NA	NA	NA	NA	rs35392762	0.07	0.07	0.059	0.0828674	0.0954	0.005	0.2176	0.0688	0.0736	0.09	0.0017	0.18	0.05	0.0961	0.18	0.04	D	0.78	P	0.132	B	.	.	1.000	P	.	.	.	.	-1.052	T	0.000	T	0.072	0.497	6.698	1.86	0.704	0.155	5.793	0.497465	NA	0	0.094975	0.073714	NA	0.08	NA	7.3801917
914	11	551753	551753	G	A	exonic	LRRC56	NA	nonsynonymous SNV	LRRC56:NM_198075:exon10:c.G899A:p.R300H	exonic	ENSG00000161328	NA	nonsynonymous SNV	ENSG00000161328:ENST00000270115:exon10:c.G899A:p.R300H	NA	NA	11p15.5	NA	Name=ZBTB7A_(SC-34508),TAL1_(SC-12984)	NA	NA	rs4963198	0.64	0.64	0.645	0.647364	0.664	0.873	0.6369	0.4372	0.6892	0.67	0.83	0.58	0.41	0.6563	0.83	0.53	T	0.0	B	0.0	B	0.011	N	1.000	P	0	N	2.97	T	-1.065	T	0.000	T	0.026	0.202	5.088	3.21	0.425	0.171	6.995	0.201951	NA	0.29	0.632938	0.464725	NA	0.565	NA	7.3800954
914	11	43472746	43472746	C	T	exonic	TTC17	NA	synonymous SNV	TTC17:NM_018259:exon21:c.C2961T:p.L987L	exonic	ENSG00000052841	NA	synonymous SNV	ENSG00000052841:ENST00000039989:exon21:c.C2961T:p.L987L	Score=547;Name=lod=222	NA	11p12	NA	NA	NA	NA	rs11551137	0.08	0.08	0.043	0.0830671	0.0954	0.0317	0.2579	0.0023	0.1084	0.1	0.03	0.23	0.0041	0.1025	0.23	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.028	T	0.000	T	.	1.101	9.492	0.274	0.109	-0.334	6.232	1.100985	NA	NA	0.088837	0.021788	NA	0.065	NA	7.3799296
914	16	70569215	70569215	A	T	exonic	SF3B3	NA	synonymous SNV	SF3B3:NM_012426:exon6:c.A717T:p.P239P	exonic	ENSG00000189091	NA	synonymous SNV	ENSG00000189091:ENST00000302516:exon6:c.A717T:p.P239P	Score=638;Name=lod=522	NA	16q22.1	NA	Name=GATA-1	Name=4	NA	rs33910368	0.44	0.44	0.431	0.470248	0.4155	0.5804	0.4135	0.2874	0.7004	0.41	0.59	0.43	0.34	0.4496	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.002446	NA	NA	0.422326	0.293904	NA	0.514	NA	7.3792406
914	11	10503756	10503756	G	A	exonic	AMPD3	NA	synonymous SNV	AMPD3:NM_001172431:exon3:c.G96A:p.P32P,AMPD3:NM_000480:exon4:c.G600A:p.P200P,AMPD3:NM_001025389:exon4:c.G573A:p.P191P,AMPD3:NM_001025390:exon4:c.G594A:p.P198P,AMPD3:NM_001172430:exon4:c.G573A:p.P191P	exonic	ENSG00000133805	NA	synonymous SNV	ENSG00000133805:ENST00000444303:exon3:c.G96A:p.P32P,ENSG00000133805:ENST00000396553:exon4:c.G573A:p.P191P,ENSG00000133805:ENST00000396554:exon4:c.G600A:p.P200P,ENSG00000133805:ENST00000528723:exon4:c.G594A:p.P198P,ENSG00000133805:ENST00000529507:exon4:c.G573A:p.P191P,ENSG00000133805:ENST00000529834:exon4:c.G573A:p.P191P,ENSG00000133805:ENST00000534047:exon4:c.G600A:p.P200P,ENSG00000133805:ENST00000524866:exon5:c.G573A:p.P191P	NA	NA	11p15.4	Score=754;Name=V$STAT5A_02	NA	NA	NA	rs16907852	0.12	0.12	0.141	0.13119	0.0994	0.003	0.0879	0.3253	0.0644	0.1	NA	0.1	0.31	0.0965	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.53123	NA	NA	0.092709	0.275125	NA	0.13	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000079369.1;CLNDSDB=.;CLNDSDBID=.	7.3780576
914	6	29910562	29910562	A	C	exonic	HLA-A	NA	synonymous SNV	HLA-A:NM_001242758:exon2:c.A102C:p.T34T,HLA-A:NM_002116:exon2:c.A102C:p.T34T	exonic	ENSG00000206503	NA	synonymous SNV	ENSG00000206503:ENST00000376802:exon2:c.A102C:p.T34T,ENSG00000206503:ENST00000376806:exon2:c.A102C:p.T34T,ENSG00000206503:ENST00000376809:exon2:c.A102C:p.T34T,ENSG00000206503:ENST00000396634:exon4:c.A102C:p.T34T	NA	NA	6p22.1	NA	Name=Pol2,Pol2-4H8,CTCF	Name=11	NA	rs1059418	0.18	0.18	0.029	0.20008	0.1282	0.3284	0.1182	0.1641	0.2485	0.12	0.3	0.13	0.16	0.1605	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.073415	NA	NA	NA	NA	NA	0.181	NA	7.3779666
914	13	108518444	108518444	G	A	exonic	FAM155A	NA	synonymous SNV	FAM155A:NM_001080396:exon1:c.C501T:p.R167R	exonic	ENSG00000204442	NA	synonymous SNV	ENSG00000204442:ENST00000375915:exon1:c.C501T:p.R167R	Score=569;Name=lod=275	NA	13q33.3	Score=896;Name=V$E2F_02	NA	NA	NA	rs1771137	0.15	0.15	0.163	0.18151	0.0795	0.1806	0.1571	0.2867	0.1626	0.08	0.13	0.13	0.32	0.1263	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.04775	NA	NA	0.083255	0.239559	NA	0.167	NA	7.3776116
914	5	180626927	180626927	A	G	exonic	TRIM7	NA	nonsynonymous SNV	TRIM7:NM_203297:exon1:c.T227C:p.V76A,TRIM7:NM_203293:exon3:c.T773C:p.V258A,TRIM7:NM_203294:exon3:c.T149C:p.V50A,TRIM7:NM_203295:exon3:c.T149C:p.V50A,TRIM7:NM_203296:exon3:c.T149C:p.V50A	exonic	ENSG00000146054	NA	nonsynonymous SNV	ENSG00000146054:ENST00000393319:exon1:c.T227C:p.V76A,ENSG00000146054:ENST00000274773:exon3:c.T773C:p.V258A,ENSG00000146054:ENST00000361809:exon3:c.T149C:p.V50A,ENSG00000146054:ENST00000393315:exon3:c.T149C:p.V50A,ENSG00000146054:ENST00000422067:exon3:c.T149C:p.V50A	NA	NA	5q35.3	Score=834;Name=V$AP4_01	NA	NA	NA	rs416574	0.47	0.47	0.494	0.532947	0.2893	0.4732	0.2709	0.9455	0.4734	0.28	0.44	0.27	0.94	0.3769	0.94	0.38	T	0.0	B	0.0	B	0.707	N	1.000	P	-0.69	N	3.62	T	-1.082	T	0.000	T	0.011	-0.224	2.916	-0.916	-0.899	-0.072	2.280	-0.224239	NA	0.41	0.289767	0.828643	ID=COSM150034;OCCURENCE=1(stomach)	0.399	NA	7.3773664
914	8	77895865	77895865	A	G	exonic	PEX2	NA	nonsynonymous SNV	PEX2:NM_001079867:exon3:c.T550C:p.C184R,PEX2:NM_001172087:exon3:c.T550C:p.C184R,PEX2:NM_000318:exon4:c.T550C:p.C184R,PEX2:NM_001172086:exon5:c.T550C:p.C184R	exonic	ENSG00000164751	NA	nonsynonymous SNV	ENSG00000164751:ENST00000520103:exon3:c.T550C:p.C184R,ENSG00000164751:ENST00000522527:exon3:c.T550C:p.C184R,ENSG00000164751:ENST00000357039:exon4:c.T550C:p.C184R,ENSG00000164751:ENST00000419564:exon4:c.T550C:p.C184R	Score=556;Name=lod=243	NA	8q21.11	NA	NA	NA	NA	rs10087163	0.99	0.99	0.998	0.996206	0.9831	1	0.9986	1	0.999	0.98	1	1	1	0.9878	1	1	T	0.0	B	0.0	B	0.000	N	0.177	P	-2.895	N	-1.47	T	-0.933	T	0.000	T	0.398	-0.84	0.573	3.59	0.429	6.173	10.819	-0.840233	NA	1	0.985116	0.997049	NA	1	NA	7.3773174
914	5	176637149	176637149	G	A	exonic	NSD1	NA	synonymous SNV	NSD1:NM_022455:exon5:c.G1749A:p.E583E,NSD1:NM_172349:exon6:c.G942A:p.E314E	exonic	ENSG00000165671	NA	synonymous SNV	ENSG00000165671:ENST00000361032:exon2:c.G1440A:p.E480E,ENSG00000165671:ENST00000439151:exon5:c.G1749A:p.E583E,ENSG00000165671:ENST00000347982:exon6:c.G942A:p.E314E,ENSG00000165671:ENST00000354179:exon6:c.G942A:p.E314E	Score=505;Name=lod=151	NA	5q35.3	NA	NA	NA	NA	rs3733874	0.22	0.22	0.219	NA	NA	NA	NA	NA	NA	0.12	0.51	0.19	0.08	0.1765	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.105471	NA	NA	0.113282	0.075296	NA	0.167	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000082103.1;CLNDSDB=.;CLNDSDBID=.	7.3768846
914	3	75379085	75379085	G	A	intergenic	MIR4444-1,FAM86DP	dist=115386;dist=91618	NA	NA	ncRNA_exonic	ENSG00000228868	NA	NA	NA	Score=397;Name=lod=55	NA	3p12.3	Score=846;Name=V$RFX1_01	Name=GATA-2,GATA3_(SC-268)	Name=11	NA	rs12490683	0.45	0.45	0.44	0.410942	0.6233	0.4375	0.4481	0.1271	0.5225	0.62	0.46	0.49	0.14	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.949431	NA	0	NA	NA	NA	0.471	NA	7.3767
914	10	134161633	134161633	A	G	exonic	LRRC27	NA	synonymous SNV	LRRC27:NM_001143757:exon6:c.A699G:p.P233P,LRRC27:NM_001143758:exon6:c.A699G:p.P233P,LRRC27:NM_001143759:exon6:c.A699G:p.P233P,LRRC27:NM_030626:exon6:c.A699G:p.P233P	exonic	ENSG00000148814	NA	synonymous SNV	ENSG00000148814:ENST00000368610:exon5:c.A513G:p.P171P,ENSG00000148814:ENST00000432555:exon5:c.A318G:p.P106P,ENSG00000148814:ENST00000344079:exon6:c.A699G:p.P233P,ENSG00000148814:ENST00000368612:exon6:c.A513G:p.P171P,ENSG00000148814:ENST00000368613:exon6:c.A699G:p.P233P,ENSG00000148814:ENST00000368614:exon6:c.A699G:p.P233P,ENSG00000148814:ENST00000368615:exon6:c.A699G:p.P233P,ENSG00000148814:ENST00000392638:exon6:c.A699G:p.P233P	NA	NA	10q26.3	NA	NA	NA	NA	rs2474328	0.83	0.83	0.842	0.845847	0.7535	0.8651	0.7954	0.9834	0.771	0.75	0.83	0.8	0.98	0.7856	0.98	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-1.069	T	0.000	T	.	0.266	5.437	-8.2	-3.477	-4.009	1.698	0.265676	NA	NA	0.751047	0.944167	NA	0.739	NA	7.3765196
914	12	104709559	104709559	C	T	exonic	TXNRD1	NA	unknown	UNKNOWN	exonic	ENSG00000198431	NA	synonymous SNV	ENSG00000198431:ENST00000354940:exon4:c.C165T:p.L55L,ENSG00000198431:ENST00000378070:exon4:c.C462T:p.L154L,ENSG00000198431:ENST00000397736:exon4:c.C297T:p.L99L,ENSG00000198431:ENST00000427956:exon4:c.C510T:p.L170L,ENSG00000198431:ENST00000526580:exon4:c.C165T:p.L55L,ENSG00000198431:ENST00000527688:exon4:c.C165T:p.L55L,ENSG00000198431:ENST00000540716:exon4:c.C51T:p.L17L,ENSG00000198431:ENST00000388854:exon5:c.C321T:p.L107L,ENSG00000198431:ENST00000527335:exon5:c.C165T:p.L55L,ENSG00000198431:ENST00000542918:exon5:c.C315T:p.L105L,ENSG00000198431:ENST00000526266:exon6:c.C165T:p.L55L,ENSG00000198431:ENST00000531689:exon6:c.C165T:p.L55L,ENSG00000198431:ENST00000531691:exon6:c.C297T:p.L99L,ENSG00000198431:ENST00000429002:exon7:c.C615T:p.L205L	Score=483;Name=lod=122	NA	12q23.3	NA	Name=Pol2	Name=31	NA	rs4964287	0.32	0.32	0.344	0.307907	0.336	0.1974	0.2392	0.4259	0.2822	0.36	0.23	0.25	0.44	0.3095	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.962824	NA	NA	0.311682	0.390011	NA	0.268	NA	7.3761513
914	12	9232268	9232268	T	C	exonic	A2M	NA	nonsynonymous SNV	A2M:NM_000014:exon24:c.A2998G:p.I1000V	exonic	ENSG00000175899	NA	nonsynonymous SNV	ENSG00000175899:ENST00000318602:exon24:c.A2998G:p.I1000V	NA	NA	12p13.31	NA	NA	NA	NA	rs669	0.27	0.27	0.244	0.254393	0.3191	0.0823	0.3919	0.329	0.1667	0.33	0.07	0.4	0.29	0.3102	0.4	0.17	T	0.019	B	0.02	B	0.049	N	1.000	P	1.29	L	1.21	T	-0.937	T	0.000	T	0.045	0.738	7.92	0.089	-0.137	0.910	5.746	0.738315	NA	0.14	0.32821	0.301956	NA	0.348	CLINSIG=non-pathogenic|other;CLNDBN=ALPHA-2-MACROGLOBULIN_POLYMORPHISM|Alzheimer_disease\x2c_susceptibility_to;CLNREVSTAT=single|single;CLNACC=RCV000019801.1|RCV000019802.1;CLNDSDB=.|.;CLNDSDBID=.|.	7.3758234
914	19	52496149	52496149	C	T	exonic	ZNF615	NA	nonsynonymous SNV	ZNF615:NM_198480:exon6:c.G2180A:p.R727K,ZNF615:NM_001199324:exon7:c.G2213A:p.R738K	exonic	ENSG00000197619	NA	nonsynonymous SNV	ENSG00000197619:ENST00000391795:exon4:c.G2195A:p.R732K,ENSG00000197619:ENST00000376716:exon6:c.G2180A:p.R727K,ENSG00000197619:ENST00000594083:exon6:c.G2213A:p.R738K,ENSG00000197619:ENST00000602063:exon6:c.G2180A:p.R727K,ENSG00000197619:ENST00000598071:exon7:c.G2213A:p.R738K	NA	NA	19q13.41	NA	NA	NA	NA	rs16983353	0.41	0.41	0.415	0.477436	0.3131	0.3948	0.3977	0.6074	0.6125	0.33	0.36	0.4	0.6	0.3671	0.6	0.14	T	0.0	B	0.0	B	.	.	1.000	P	-0.14	N	1.32	T	-0.958	T	0.000	T	0.02	0.644	7.455	2.5	0.108	-0.207	6.112	0.643567	NA	0.28	0.277442	0.580118	ID=COSM148710,COSM148709;OCCURENCE=1(stomach)	0.457	NA	7.3756914
914	19	52497943	52497943	G	A	exonic	ZNF615	NA	nonsynonymous SNV	ZNF615:NM_198480:exon6:c.C386T:p.T129M,ZNF615:NM_001199324:exon7:c.C419T:p.T140M	exonic	ENSG00000197619	NA	nonsynonymous SNV	ENSG00000197619:ENST00000391795:exon4:c.C401T:p.T134M,ENSG00000197619:ENST00000376716:exon6:c.C386T:p.T129M,ENSG00000197619:ENST00000593650:exon6:c.C407T:p.T136M,ENSG00000197619:ENST00000594083:exon6:c.C419T:p.T140M,ENSG00000197619:ENST00000602063:exon6:c.C386T:p.T129M,ENSG00000197619:ENST00000598071:exon7:c.C419T:p.T140M	NA	NA	19q13.41	NA	Name=KAP1	NA	NA	rs10500311	0.41	0.41	0.414	0.476837	0.3121	0.3929	0.3977	0.6074	0.6125	0.33	0.36	0.4	0.6	0.3675	0.6	0.21	T	0.005	B	0.004	B	.	.	1.000	P	0	N	3.15	T	-1.019	T	0.000	T	0.028	-0.301	2.565	1.3	0.341	0.558	4.163	-0.300886	NA	0.23	0.27814	0.579891	ID=COSM148713,COSM148714;OCCURENCE=1(stomach)	0.457	NA	7.3755934
914	8	124710729	124710729	C	T	exonic	ANXA13	NA	nonsynonymous SNV	ANXA13:NM_004306:exon4:c.G257A:p.R86H,ANXA13:NM_001003954:exon5:c.G380A:p.R127H	exonic	ENSG00000104537	NA	nonsynonymous SNV	ENSG00000104537:ENST00000419625:exon4:c.G257A:p.R86H,ENSG00000104537:ENST00000520519:exon4:c.G170A:p.R57H,ENSG00000104537:ENST00000262219:exon5:c.G380A:p.R127H	NA	NA	8q24.13	NA	NA	NA	NA	rs2294013	0.24	0.24	0.252	0.234026	0.34	0.1935	0.2133	0.2118	0.2117	0.33	0.16	0.25	0.21	0.2816	0.34	0.03	D	0.021	B	0.016	B	0.007	N	1.000	P	1.245	L	3.56	T	-0.942	T	0.000	T	0.114	2.358	13.84	-0.199	0.030	0.044	6.870	2.358382	2.358382	0.15	0.336628	0.213118	NA	0.239	NA	7.3751054
915	6	25732794	25732794	G	A	ncRNA_exonic	HIST1H2APS1	NA	NA	NA	ncRNA_exonic	ENSG00000216436	NA	NA	NA	Score=352;Name=lod=36	NA	6p22.2	NA	Name=CTCF	Name=3	NA	rs12192077	0.38	0.38	0.316	0.348642	0.2922	0.6875	0.4366	0.0976	0.3344	0.29	0.74	0.4	0.1	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.870058	NA	NA	NA	NA	NA	0.246	NA	7.3744666
915	3	100354524	100354524	A	G	exonic	GPR128	NA	nonsynonymous SNV	GPR128:NM_032787:exon5:c.A451G:p.K151E	exonic	ENSG00000144820	NA	nonsynonymous SNV	ENSG00000144820:ENST00000273352:exon5:c.A451G:p.K151E	NA	NA	3q12.2	NA	NA	NA	NA	rs1144122	0.18	0.18	0.191	0.152157	0.3598	0.0159	0.1758	0.1097	0.1196	0.36	0.01	0.19	0.11	0.2561	0.36	0.96	T	0.0	B	0.0	B	0.094	N	1.000	P	-0.345	N	1.17	T	-1.002	T	0.000	T	0.041	-0.888	0.464	-1.43	-0.594	-2.015	5.643	-0.887513	NA	1	0.343488	0.167499	NA	0.348	NA	7.3739454
915	17	72860253	72860253	A	G	intronic	FDXR	NA	NA	NA	exonic	ENSG00000161513	NA	nonsynonymous SNV	ENSG00000161513:ENST00000455107:exon10:c.T887C:p.L296P	NA	NA	17q25.1	NA	NA	NA	NA	rs552432	0.32	0.32	0.295	0.286941	0.2664	0.4673	0.1816	0.2753	0.2127	0.28	0.49	0.19	0.28	0.2657	0.49	.	.	.	.	.	.	.	.	1.000	P	.	.	2.26	T	-0.923	T	0.000	T	0.053	-1.023	0.229	2.75	0.395	1.039	6.353	-1.022611	NA	0.17	0.260698	0.264639	NA	0.283	NA	7.3738687
915	9	100672338	100672338	C	T	exonic	C9orf156	NA	nonsynonymous SNV	C9orf156:NM_016481:exon4:c.G970A:p.V324M	exonic	ENSG00000136932	NA	nonsynonymous SNV	ENSG00000136932:ENST00000375118:exon1:c.G532A:p.V178M,ENSG00000136932:ENST00000375119:exon4:c.G970A:p.V324M	NA	NA	9q22.33	NA	NA	NA	NA	rs2282192	0.55	0.55	0.573	0.589257	0.2704	0.7788	0.4553	0.7935	0.5409	0.28	0.78	0.42	0.79	0.4181	0.79	0.13	T	0.029	B	0.009	B	0.741	N	1.000	P	1.175	L	0.84	T	-0.961	T	0.000	T	0.026	1.36	10.47	-3.42	-0.506	-0.162	1.555	1.360029	1.360029	0.12	0.271163	0.708352	ID=COSM1582998;OCCURENCE=1(meninges)	0.471	NA	7.3736704
915	10	121586882	121586882	A	G	exonic	INPP5F	NA	nonsynonymous SNV	INPP5F:NM_001243194:exon6:c.A1159G:p.N387D,INPP5F:NM_014937:exon20:c.A2989G:p.N997D	exonic	ENSG00000198825	NA	nonsynonymous SNV	ENSG00000198825:ENST00000369080:exon6:c.A1159G:p.N387D,ENSG00000198825:ENST00000361976:exon20:c.A2989G:p.N997D	NA	NA	10q26.11	NA	NA	NA	NA	rs3188055	0.29	0.29	0.287	0.26897	0.337	0.1796	0.2824	0.2678	0.2832	0.33	0.18	0.31	0.32	0.2927	0.37	0.22	T	0.0	B	0.001	B	0.622	N	1.000	P	1.39	L	1.18	T	-0.987	T	0.000	T	0.018	-1.003	0.257	1.93	0.141	1.099	5.670	-1.00258	NA	0.15	0.331279	0.264185	ID=COSM147061;OCCURENCE=1(stomach)	0.268	NA	7.3723544
915	9	114484837	114484837	G	T	exonic	C9orf84	NA	synonymous SNV	C9orf84:NM_001080551:exon11:c.C1674A:p.L558L,C9orf84:NM_173521:exon13:c.C1791A:p.L597L	exonic	ENSG00000165181	NA	synonymous SNV	ENSG00000165181:ENST00000394777:exon11:c.C1674A:p.L558L,ENSG00000165181:ENST00000394779:exon11:c.C1674A:p.L558L,ENSG00000165181:ENST00000318737:exon13:c.C1791A:p.L597L,ENSG00000165181:ENST00000374287:exon15:c.C1791A:p.L597L	Score=476;Name=lod=115	NA	9q31.3	Score=767;Name=V$STAT5A_02	NA	NA	NA	rs62569959	0.08	0.08	0.081	0.0978435	0.1034	0.1131	0.049	0.0008	0.2423	0.11	0.12	0.07	0.002	0.1034	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.270429	NA	NA	0.088023	0.016795	NA	0.051	NA	7.3718436
915	8	86057707	86057707	A	G	exonic	LRRCC1	NA	synonymous SNV	LRRCC1:NM_033402:exon19:c.A3060G:p.Q1020Q	exonic	ENSG00000133739	NA	synonymous SNV	ENSG00000133739:ENST00000414626:exon18:c.A3000G:p.Q1000Q,ENSG00000133739:ENST00000360375:exon19:c.A3060G:p.Q1020Q	Score=440;Name=lod=82	NA	8q21.2	Score=902;Name=V$CEBP_Q2	NA	NA	NA	rs62525428	0.05	0.05	0.031	0.0571086	0.0905	0.0159	0.0389	0.0083	0.1442	0.1	0.01	0.04	0.01	0.0948	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.266984	NA	NA	0.110509	0.019624	NA	0.029	NA	7.3708576
915	11	82880341	82880341	G	A	exonic	PCF11	NA	synonymous SNV	PCF11:NM_015885:exon8:c.G2964A:p.Q988Q	exonic	ENSG00000165494	NA	synonymous SNV	ENSG00000165494:ENST00000298281:exon8:c.G2964A:p.Q988Q	Score=686;Name=lod=818	NA	11q14.1	Score=858;Name=V$TAL1BETAITF2_01	NA	NA	NA	rs12284052	0.2	0.2	0.212	0.244808	0.0835	0.0496	0.1167	0.6657	0.1339	0.08	0.05	0.12	0.62	0.1246	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.646648	NA	NA	0.088015	0.539666	NA	0.275	NA	7.3705516
915	16	55536727	55536727	C	T	exonic	MMP2	NA	synonymous SNV	MMP2:NM_001127891:exon12:c.C1656T:p.F552F,MMP2:NM_004530:exon12:c.C1806T:p.F602F	exonic	ENSG00000087245	NA	synonymous SNV	ENSG00000087245:ENST00000570283:exon6:c.C681T:p.F227F,ENSG00000087245:ENST00000219070:exon12:c.C1806T:p.F602F,ENSG00000087245:ENST00000437642:exon12:c.C1656T:p.F552F,ENSG00000087245:ENST00000543485:exon12:c.C1578T:p.F526F,ENSG00000087245:ENST00000570308:exon13:c.C1578T:p.F526F	Score=582;Name=lod=309	NA	16q12.2	NA	Name=TCF4	Name=117	NA	rs14070	0.34	0.34	0.312	0.303914	0.4533	0.246	0.4769	0.1505	0.2945	0.48	0.27	0.44	0.16	0.395	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.190802	NA	NA	0.448023	0.206779	NA	0.254	NA	7.3703436
915	18	7008583	7008583	A	C	exonic	LAMA1	NA	synonymous SNV	LAMA1:NM_005559:exon28:c.T4026G:p.V1342V	exonic	ENSG00000101680	NA	synonymous SNV	ENSG00000101680:ENST00000389658:exon28:c.T4026G:p.V1342V	Score=381;Name=lod=47	NA	18p11.31	Score=869;Name=V$NF1_Q6	NA	NA	NA	rs73938538	0.15	0.15	0.159	0.171725	0.0835	0.1091	0.1556	0.3411	0.1094	0.09	0.09	0.15	0.34	0.1249	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.191585	NA	NA	0.090116	0.285066	ID=COSM148382;OCCURENCE=1(stomach)	0.217	NA	7.3681506
915	12	9317784	9317784	A	G	exonic	PZP	NA	nonsynonymous SNV	PZP:NM_002864:exon19:c.T2438C:p.V813A	exonic	ENSG00000126838	NA	nonsynonymous SNV	ENSG00000126838:ENST00000381997:exon16:c.T2045C:p.V682A,ENSG00000126838:ENST00000261336:exon19:c.T2438C:p.V813A	NA	NA	12p13.31	NA	NA	NA	NA	rs2277413	0.34	0.34	0.35	0.386182	0.3419	0.5357	0.2421	0.3411	0.4407	0.28	0.49	0.27	0.28	0.3295	0.49	1	T	0.019	B	0.013	B	0.389	N	1.000	P	-0.555	N	1.83	T	-0.940	T	0.000	T	0.025	-2.442	0.003	-0.929	0.004	-1.395	3.032	-2.442208	NA	1	0.295	0.332274	NA	0.254	NA	7.3669334
915	8	144992361	144992361	T	C	exonic	PLEC	NA	synonymous SNV	PLEC:NM_201378:exon32:c.A11586G:p.P3862P,PLEC:NM_201379:exon32:c.A11562G:p.P3854P,PLEC:NM_201380:exon32:c.A12039G:p.P4013P,PLEC:NM_201381:exon32:c.A11532G:p.P3844P,PLEC:NM_201382:exon32:c.A11628G:p.P3876P,PLEC:NM_201383:exon32:c.A11640G:p.P3880P,PLEC:NM_201384:exon32:c.A11628G:p.P3876P,PLEC:NM_000445:exon33:c.A11709G:p.P3903P	exonic	ENSG00000178209	NA	synonymous SNV	ENSG00000178209:ENST00000322810:exon32:c.A12039G:p.P4013P,ENSG00000178209:ENST00000345136:exon32:c.A11628G:p.P3876P,ENSG00000178209:ENST00000354589:exon32:c.A11628G:p.P3876P,ENSG00000178209:ENST00000354958:exon32:c.A11562G:p.P3854P,ENSG00000178209:ENST00000356346:exon32:c.A11586G:p.P3862P,ENSG00000178209:ENST00000357649:exon32:c.A11640G:p.P3880P,ENSG00000178209:ENST00000398774:exon32:c.A11532G:p.P3844P,ENSG00000178209:ENST00000527096:exon32:c.A11697G:p.P3899P,ENSG00000178209:ENST00000436759:exon33:c.A11709G:p.P3903P	Score=389;Name=lod=51	NA	8q24.3	NA	Name=Pol2	NA	NA	rs7822511	0.46	0.46	0.48	0.478235	0.4284	0.1696	0.3804	0.8926	0.3569	0.42	0.19	0.41	0.87	0.4275	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.556818	NA	NA	0.443854	0.839064	NA	0.449	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000078838.3;CLNDSDB=.;CLNDSDBID=.	7.3669126
915	14	23858232	23858232	C	T	exonic	MYH6	NA	synonymous SNV	MYH6:NM_002471:exon29:c.G4011A:p.S1337S	exonic	ENSG00000197616	NA	synonymous SNV	ENSG00000197616:ENST00000356287:exon28:c.G4011A:p.S1337S,ENSG00000197616:ENST00000405093:exon29:c.G4011A:p.S1337S	NA	NA	14q11.2	Score=923;Name=V$TCF11_01	NA	NA	NA	rs451794	0.05	0.05	0.057	0.0347444	0.1064	NA	0.0432	0.0083	0.0266	0.11	NA	0.05	0.01	0.0766	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.785064	NA	NA	0.117209	0.024739	NA	0.036	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000037494.1;CLNDSDB=.;CLNDSDBID=.	7.3664576
915	2	69049941	69049941	T	C	exonic	ARHGAP25	NA	nonsynonymous SNV	ARHGAP25:NM_001166276:exon9:c.T1649C:p.M550T,ARHGAP25:NM_001166277:exon9:c.T1550C:p.M517T,ARHGAP25:NM_014882:exon9:c.T1646C:p.M549T,ARHGAP25:NM_001007231:exon10:c.T1670C:p.M557T	exonic	ENSG00000163219	NA	nonsynonymous SNV	ENSG00000163219:ENST00000479844:exon4:c.T749C:p.M250T,ENSG00000163219:ENST00000409030:exon9:c.T1646C:p.M549T,ENSG00000163219:ENST00000409220:exon9:c.T1649C:p.M550T,ENSG00000163219:ENST00000467265:exon9:c.T1550C:p.M517T,ENSG00000163219:ENST00000295381:exon10:c.T1667C:p.M556T,ENSG00000163219:ENST00000409202:exon10:c.T1670C:p.M557T	Score=325;Name=lod=28	NA	2p13.3	NA	NA	NA	NA	rs10177248	0.37	0.37	0.375	0.320088	0.335	0.4097	0.3213	0.3525	0.1677	0.31	0.49	0.27	0.39	0.3141	0.49	0.42	T	0.0	B	0.0	B	0.781	N	0.000	P	0.205	N	2.89	T	-0.910	T	0.000	T	0.266	-0.758	0.793	-1.08	-0.347	-0.142	9.614	-0.758089	NA	1	0.318953	0.358311	NA	0.319	NA	7.3652804
916	20	61834092	61834092	G	A	exonic	YTHDF1	NA	synonymous SNV	YTHDF1:NM_017798:exon4:c.C1200T:p.D400D	exonic	ENSG00000149658	NA	synonymous SNV	ENSG00000149658:ENST00000370333:exon2:c.C1050T:p.D350D,ENSG00000149658:ENST00000370339:exon4:c.C1200T:p.D400D	Score=598;Name=lod=358	NA	20q13.33	Score=856;Name=V$CREB_02	NA	NA	NA	rs41282994	0.05	0.05	0.053	0.0561102	0.1153	0.001	0.0648	0.0038	0.1166	0.11	0.0017	0.09	0.002	0.0841	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.624777	NA	NA	0.103023	0.021108	NA	0.08	NA	7.3642436
916	22	42523943	42523943	A	G	exonic	CYP2D6	NA	nonsynonymous SNV	CYP2D6:NM_001025161:exon5:c.T733C:p.C245R,CYP2D6:NM_000106:exon6:c.T886C:p.C296R	exonic	ENSG00000100197	NA	nonsynonymous SNV	ENSG00000100197:ENST00000359033:exon5:c.T733C:p.C245R,ENSG00000100197:ENST00000360608:exon6:c.T886C:p.C296R,ENSG00000100197:ENST00000389970:exon7:c.T886C:p.C296R	NA	NA	22q13.2	NA	NA	NA	NA	rs16947	0.66	0.66	0.634	0.640775	0.6571	0.8601	0.6729	0.4463	0.638	0.66	0.85	0.69	0.41	0.6567	0.85	.	.	0.0	B	0.001	B	0.605	N	1.000	P	.	.	-0.14	T	-0.980	T	0.000	T	0.343	-0.852	0.545	-0.156	-0.119	-1.200	9.506	-0.851746	NA	1	0.657282	0.486566	ID=COSM1130422,COSM1130423;OCCURENCE=1(prostate)	0.594	CLINSIG=pathogenic;CLNDBN=Debrisoquine\x2c_ultrarapid_metabolism_of;CLNREVSTAT=single;CLNACC=RCV000018391.26;CLNDSDB=MedGen;CLNDSDBID=C1837157	7.3622514
916	10	45953767	45953767	A	G	exonic	MARCH8	NA	nonsynonymous SNV	MARCH8:NM_001002266:exon7:c.T796C:p.Y266H,MARCH8:NM_145021:exon7:c.T796C:p.Y266H,MARCH8:NM_001002265:exon8:c.T796C:p.Y266H	exonic	ENSG00000165406	NA	nonsynonymous SNV	ENSG00000165406:ENST00000319836:exon7:c.T796C:p.Y266H,ENSG00000165406:ENST00000395769:exon7:c.T796C:p.Y266H,ENSG00000165406:ENST00000395771:exon8:c.T796C:p.Y266H,ENSG00000165406:ENST00000453424:exon8:c.T1642C:p.Y548H	NA	NA	10q11.21	NA	NA	NA	NA	rs7908745	0.31	0.31	0.308	0.302915	0.3529	0.1706	0.3703	0.3328	0.2996	0.35	0.18	0.35	0.35	0.3146	0.35	0.57	T	0.0	B	0.0	B	0.006	N	1.000	P	0	N	2.81	T	-0.917	T	0.000	T	0.25	0.498	6.703	0.455	-0.157	2.648	5.541	0.498336	NA	0.56	0.30407	0.352701	NA	0.246	NA	7.3617634
916	9	109687288	109687288	T	C	exonic	ZNF462	NA	synonymous SNV	ZNF462:NM_021224:exon3:c.T1095C:p.Y365Y	exonic	ENSG00000148143	NA	synonymous SNV	ENSG00000148143:ENST00000277225:exon3:c.T1095C:p.Y365Y,ENSG00000148143:ENST00000457913:exon3:c.T1095C:p.Y365Y	Score=646;Name=lod=564	NA	9q31.2	Score=890;Name=V$E4BP4_01	NA	NA	NA	rs1000152	0.19	0.19	0.189	0.197284	0.0895	0.129	0.17	0.4297	0.0838	0.08	0.13	0.16	0.44	0.1222	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.118228	NA	NA	0.093721	0.370858	ID=COSM1459160;OCCURENCE=1(large_intestine)	0.275	NA	7.3612456
916	5	60999768	60999768	C	T	exonic	C5orf64	NA	nonsynonymous SNV	C5orf64:NM_173667:exon4:c.C301T:p.R101W	exonic	ENSG00000178722	NA	nonsynonymous SNV	ENSG00000178722:ENST00000313303:exon3:c.C301T:p.R101W,ENSG00000178722:ENST00000505642:exon4:c.C301T:p.R101W	NA	NA	5q12.1	NA	NA	NA	NA	rs436696	0.22	0.22	0.237	0.21845	0.329	0.003	0.2061	0.3411	0.1697	0.32	0.0017	0.23	0.33	0.2958	0.35	0	D	0.0	B	0.0	B	0.995	N	1.000	P	-0.345	N	1.03	T	-0.971	T	0.000	T	0.06	0.148	4.794	1.61	0.398	0.239	5.644	0.147611	NA	0.11	0.3485	0.314987	ID=COSM1438081;OCCURENCE=1(large_intestine)	0.232	NA	7.3600334
916	3	51978220	51978220	A	G	exonic	PARP3	NA	nonsynonymous SNV	PARP3:NM_001003931:exon3:c.A320G:p.H107R,PARP3:NM_005485:exon3:c.A299G:p.H100R	exonic	ENSG00000041880	NA	nonsynonymous SNV	ENSG00000041880:ENST00000498510:exon2:c.A299G:p.H100R,ENSG00000041880:ENST00000398755:exon3:c.A320G:p.H107R,ENSG00000041880:ENST00000431474:exon3:c.A299G:p.H100R,ENSG00000041880:ENST00000417220:exon4:c.A299G:p.H100R	Score=469;Name=lod=107	NA	3p21.2	NA	NA	NA	NA	rs28547534	1	1	0.995	0.997604	0.992	1	0.9986	1	0.9969	0.99	1	0.99	1	0.9927	1	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-2.375	N	2.71	T	-1.000	T	0.000	T	0.43	-1.253	0.05	3.14	0.138	2.373	7.582	-1.252529	NA	1	0.989076	0.99807	NA	0.971	NA	7.3595574
916	20	13071816	13071816	C	T	exonic	SPTLC3	NA	synonymous SNV	SPTLC3:NM_018327:exon5:c.C693T:p.F231F	exonic	ENSG00000172296	NA	synonymous SNV	ENSG00000172296:ENST00000378194:exon5:c.C693T:p.F231F,ENSG00000172296:ENST00000399002:exon5:c.C693T:p.F231F	Score=638;Name=lod=524	NA	20p12.1	Score=847;Name=V$CEBPB_02	NA	NA	NA	rs6109692	0.08	0.08	0.085	0.0740815	0.1054	0.0694	0.0836	0.0567	0.0634	0.1	0.06	0.09	0.07	0.0943	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.233243	1.233243	NA	0.107584	0.064834	NA	0.101	NA	7.3593826
916	3	50357869	50357869	A	C	exonic	HYAL2	NA	nonsynonymous SNV	HYAL2:NM_003773:exon2:c.T52G:p.S18A,HYAL2:NM_033158:exon3:c.T52G:p.S18A	exonic	ENSG00000068001	NA	nonsynonymous SNV	ENSG00000068001:ENST00000447092:exon1:c.T52G:p.S18A,ENSG00000068001:ENST00000357750:exon2:c.T52G:p.S18A,ENSG00000068001:ENST00000395139:exon2:c.T52G:p.S18A,ENSG00000068001:ENST00000415028:exon2:c.T52G:p.S18A,ENSG00000068001:ENST00000424190:exon2:c.T52G:p.S18A,ENSG00000068001:ENST00000426286:exon2:c.T52G:p.S18A,ENSG00000068001:ENST00000458018:exon2:c.T52G:p.S18A,ENSG00000068001:ENST00000428028:exon3:c.T52G:p.S18A,ENSG00000068001:ENST00000442581:exon3:c.T52G:p.S18A	Score=410;Name=lod=62	NA	3p21.31	NA	NA	NA	NA	rs709210	0.77	0.77	0.73	0.736022	0.6501	0.7917	0.8156	0.9319	0.4458	0.64	0.79	0.8	0.95	0.6796	0.95	1	T	0.0	B	0.0	B	0.001	N	1.000	P	-0.11	N	2.62	T	-0.950	T	0.000	T	0.199	1.416	10.67	3.74	0.878	0.175	5.350	1.416274	1.416274	1	0.644452	0.882901	ID=COSM1162360;OCCURENCE=1(pancreas)	0.862	NA	7.3591814
916	2	21232804	21232804	G	A	exonic	APOB	NA	synonymous SNV	APOB:NM_000384:exon26:c.C6936T:p.D2312D	exonic	ENSG00000084674	NA	synonymous SNV	ENSG00000084674:ENST00000233242:exon26:c.C6936T:p.D2312D	NA	NA	2p24.1	Score=790;Name=V$CART1_01	Name=Pol2	NA	NA	rs1041968	0.22	0.22	0.228	0.249201	0.4423	0.0615	0.3775	0.2095	0.2065	0.33	0.07	0.33	0.13	0.3891	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.481274	NA	NA	0.478837	0.234226	NA	NA	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116388.2;CLNDSDB=.;CLNDSDBID=.	7.3564296
916	13	95364046	95364046	C	G	exonic	SOX21	NA	synonymous SNV	SOX21:NM_007084:exon1:c.G258C:p.L86L	exonic	ENSG00000125285	NA	synonymous SNV	ENSG00000125285:ENST00000376945:exon1:c.G258C:p.L86L	Score=805;Name=lod=2482	NA	13q32.1	NA	Name=SUZ12,Egr-1	Name=47	NA	rs1060474	0.42	0.42	0.382	0.380391	0.4692	0.4692	0.428	0.267	0.317	0.46	0.49	0.46	0.27	0.4185	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.045994	NA	NA	0.42314	0.302769	NA	0.101	NA	7.3558266
916	1	145556986	145556986	C	T	intronic	ANKRD35,NBPF10	NA	NA	NA	intronic	ENSG00000198483	NA	NA	NA	Score=526;Name=lod=183	NA	1q21.1	Score=873;Name=V$BACH1_01	Name=eGFP-FOS,c-Myc,eGFP-JunD,c-Jun,GATA-1	Name=26	NA	rs56110740	0.22	0.22	0.172	0.197085	0.3221	0.1409	0.3199	0.1195	0.1442	0.3	0.11	0.33	0.14	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.376187	2.376187	NA	0.322753	0.168353	NA	0.188	NA	7.355147
917	1	112525085	112525085	G	A	exonic	KCND3	NA	synonymous SNV	KCND3:NM_004980:exon2:c.C264T:p.P88P,KCND3:NM_172198:exon2:c.C264T:p.P88P	exonic	ENSG00000171385	NA	synonymous SNV	ENSG00000171385:ENST00000369697:exon1:c.C264T:p.P88P,ENSG00000171385:ENST00000302127:exon2:c.C264T:p.P88P,ENSG00000171385:ENST00000315987:exon2:c.C264T:p.P88P	NA	NA	1p13.2	Score=704;Name=V$BRACH_01	NA	NA	NA	rs17221819	0.05	0.05	0.061	0.0471246	0.1034	0.002	0.0519	0.0356	0.0481	0.1	NA	0.07	0.03	0.0886	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.12862	NA	NA	0.120465	0.0463	NA	0.138	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117317.2;CLNDSDB=.;CLNDSDBID=.	7.3542016
917	10	101502968	101502968	A	G	exonic	CUTC	NA	synonymous SNV	CUTC:NM_015960:exon4:c.A252G:p.P84P	exonic	ENSG00000119929	NA	synonymous SNV	ENSG00000119929:ENST00000370472:exon4:c.A63G:p.P21P,ENSG00000119929:ENST00000370476:exon4:c.A252G:p.P84P,ENSG00000119929:ENST00000471520:exon4:c.A252G:p.P84P	Score=728;Name=lod=1208	NA	10q24.2	Score=883;Name=V$NMYC_01	NA	NA	NA	rs3740076	0.07	0.07	0.048	0.0638978	0.1083	0.0228	0.1499	0.0053	0.0787	0.1	0.03	0.14	0.01	0.0963	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.387209	1.387209	NA	0.107907	0.018384	NA	0.043	NA	7.3541596
917	13	100635377	100635377	C	T	exonic	ZIC2	NA	synonymous SNV	ZIC2:NM_007129:exon1:c.C1059T:p.H353H	exonic	ENSG00000043355	NA	synonymous SNV	ENSG00000043355:ENST00000376335:exon1:c.C1059T:p.H353H	Score=662;Name=lod=652	NA	13q32.3	NA	NA	NA	NA	rs1831992	0.06	0.06	0.051	0.0417332	0.1203	NA	0.0893	0.0045	0.0204	0.11	NA	0.1	0.01	0.0799	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.741398	NA	NA	0.112791	0.022696	NA	0.022	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000081471.1;CLNDSDB=.;CLNDSDBID=.	7.3536756
917	19	14829749	14829749	C	T	exonic	ZNF333	NA	nonsynonymous SNV	ZNF333:NM_032433:exon12:c.C1610T:p.A537V	exonic	ENSG00000160961	NA	nonsynonymous SNV	ENSG00000160961:ENST00000292530:exon12:c.C1610T:p.A537V,ENSG00000160961:ENST00000536363:exon13:c.C1283T:p.A428V	NA	NA	19p13.12	NA	Name=SETDB1,ZNF274	NA	NA	rs3764626	0.43	0.43	0.412	0.48123	0.3022	0.619	0.4914	0.438	0.5746	0.32	0.59	0.41	0.43	0.382	0.59	0.2	T	0.373	B	0.066	B	.	.	1.000	P	0.57	N	3.17	T	-1.038	T	0.000	T	0.07	3.029	16.1	0.305	-0.096	-0.446	12.172	3.02861	3.02861	0.22	0.29686	0.401498	NA	0.391	NA	7.3522734
917	7	5257573	5257573	G	A	exonic	WIPI2	NA	synonymous SNV	WIPI2:NM_001033520:exon4:c.G420A:p.P140P,WIPI2:NM_001033519:exon6:c.G543A:p.P181P,WIPI2:NM_016003:exon6:c.G543A:p.P181P,WIPI2:NM_001033518:exon7:c.G597A:p.P199P,WIPI2:NM_015610:exon7:c.G597A:p.P199P	exonic	ENSG00000157954	NA	synonymous SNV	ENSG00000157954:ENST00000484262:exon4:c.G420A:p.P140P,ENSG00000157954:ENST00000382384:exon6:c.G543A:p.P181P,ENSG00000157954:ENST00000401525:exon6:c.G543A:p.P181P,ENSG00000157954:ENST00000288828:exon7:c.G597A:p.P199P,ENSG00000157954:ENST00000404704:exon7:c.G597A:p.P199P	Score=517;Name=lod=168	NA	7p22.1	NA	Name=EBF	NA	NA	rs1134489	0.05	0.05	0.051	0.0473243	0.1044	0.002	0.1037	0.0076	0.0491	0.09	0.0017	0.12	0.01	0.0842	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.07703	NA	NA	0.126163	0.029505	NA	0.036	NA	7.3519036
917	10	27688109	27688109	T	C	exonic	PTCHD3	NA	nonsynonymous SNV	PTCHD3:NM_001034842:exon4:c.A1418G:p.D473G	exonic	ENSG00000182077	NA	nonsynonymous SNV	ENSG00000182077:ENST00000438700:exon4:c.A1418G:p.D473G	NA	NA	10p12.1	NA	NA	NA	NA	rs2429485	0.53	0.53	0.488	0.55012	0.6829	0.37	0.5202	0.5257	0.6534	0.68	0.31	0.56	0.54	0.6193	0.68	0.4	T	0.001	B	0.008	B	0.601	N	1.000	P	0.47	N	-2.01	D	-0.938	T	0.000	T	0.04	-2.108	0.006	-0.118	-0.224	2.124	1.184	-2.107772	NA	NA	0.68093	0.534498	NA	0.558	NA	7.3502034
917	5	68715310	68715310	C	T	exonic	MARVELD2	NA	nonsynonymous SNV	MARVELD2:NM_001038603:exon2:c.C98T:p.T33I,MARVELD2:NM_001244734:exon2:c.C98T:p.T33I	exonic	ENSG00000152939	NA	nonsynonymous SNV	ENSG00000152939:ENST00000413223:exon1:c.C98T:p.T33I,ENSG00000152939:ENST00000436532:exon1:c.C98T:p.T33I,ENSG00000152939:ENST00000325631:exon2:c.C98T:p.T33I,ENSG00000152939:ENST00000454295:exon2:c.C98T:p.T33I,ENSG00000152939:ENST00000512803:exon2:c.C98T:p.T33I,ENSG00000152939:ENST00000515844:exon2:c.C98T:p.T33I	NA	NA	5q13.2	NA	NA	NA	NA	rs1185246	0.48	0.48	0.48	0.483027	0.494	0.4881	0.5389	0.4153	0.5184	0.49	0.5	0.49	0.42	0.4997	0.5	0.12	T	0.779	P	0.277	B	0.262	N	1.000	P	1.245	L	1.49	T	-0.946	T	0.000	T	0.221	0.376	6.043	0.193	0.017	-0.490	9.938	0.376219	NA	0.11	0.489535	0.424421	NA	0.449	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000036814.1;CLNDSDB=.;CLNDSDBID=.	7.3500984
917	5	79025317	79025317	A	G	exonic	CMYA5	NA	synonymous SNV	CMYA5:NM_153610:exon2:c.A729G:p.Q243Q	exonic	ENSG00000164309	NA	synonymous SNV	ENSG00000164309:ENST00000446378:exon2:c.A729G:p.Q243Q	Score=547;Name=lod=222	NA	5q14.1	Score=912;Name=V$TATA_C	NA	NA	NA	rs1366270	0.29	0.29	0.347	0.277356	0.0815	0.3621	0.085	0.5961	0.0971	0.08	0.41	0.09	0.62	0.1485	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.021538	NA	NA	0.087224	0.511577	NA	0.319	NA	7.3494426
917	17	38024626	38024626	C	T	exonic	ZPBP2	NA	synonymous SNV	ZPBP2:NM_198844:exon1:c.C19T:p.L7L,ZPBP2:NM_199321:exon1:c.C19T:p.L7L	exonic	ENSG00000186075	NA	synonymous SNV	ENSG00000186075:ENST00000348931:exon1:c.C19T:p.L7L,ENSG00000186075:ENST00000377940:exon1:c.C19T:p.L7L,ENSG00000186075:ENST00000583811:exon1:c.C19T:p.L7L,ENSG00000186075:ENST00000584588:exon1:c.C19T:p.L7L	Score=428;Name=lod=73	NA	17q12	Score=709;Name=V$NRSF_01	Name=Pol2	NA	NA	rs11557466	0.33	0.33	0.316	0.290535	0.4722	0.2827	0.3415	0.115	0.3129	0.48	0.31	0.35	0.12	0.396	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.818068	NA	NA	0.449651	0.152746	NA	0.333	NA	7.3488156
917	1	152192978	152192978	T	C	exonic	HRNR	NA	nonsynonymous SNV	HRNR:NM_001009931:exon3:c.A1127G:p.Q376R	exonic	ENSG00000197915	NA	nonsynonymous SNV	ENSG00000197915:ENST00000368801:exon3:c.A1127G:p.Q376R	NA	NA	1q21.3	NA	NA	NA	NA	rs6587649	0.96	0.96	0.944	0.942292	1	0.999	0.9841	0.7905	1	1	1	0.99	0.81	0.9858	1	0.58	T	0.0	B	0.0	B	.	.	1.000	P	0	N	4.04	T	-0.909	T	0.002	T	0.01	0.711	7.787	-8.53	-2.643	-1.539	8.919	0.710741	NA	0.83	0.999651	0.854063	NA	0.986	NA	7.3478824
917	3	113955164	113955164	T	G	exonic	ZNF80	NA	nonsynonymous SNV	ZNF80:NM_007136:exon1:c.A758C:p.D253A	exonic	ENSG00000174255	NA	nonsynonymous SNV	ENSG00000174255:ENST00000308095:exon1:c.A758C:p.D253A,ENSG00000174255:ENST00000482457:exon1:c.A758C:p.D253A	NA	NA	3q13.31	NA	NA	NA	NA	rs3732782	0.68	0.68	0.69	0.694089	0.6849	0.5456	0.6009	0.8502	0.7117	0.68	0.57	0.59	0.86	0.6567	0.86	1	T	0.0	B	0.0	B	.	.	1.000	P	-0.8	N	2.6	T	-1.005	T	0.000	T	0.034	-1.34	0.03	2.14	0.321	-0.959	5.674	-1.340453	NA	1	0.644302	0.798684	NA	0.768	NA	7.3474314
917	15	28412872	28412872	G	A	exonic	HERC2	NA	synonymous SNV	HERC2:NM_004667:exon68:c.C10515T:p.A3505A	exonic	ENSG00000128731	NA	synonymous SNV	ENSG00000128731:ENST00000261609:exon68:c.C10515T:p.A3505A	Score=593;Name=lod=344	NA	15q13.1	Score=805;Name=V$PAX4_01	NA	NA	NA	rs61756152	0.17	0.17	0.164	0.172524	0.1074	0.2946	0.2305	0.0908	0.183	0.1	0.32	0.23	0.08	0.128	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.450211	NA	NA	0.08407	0.097821	NA	0.13	NA	7.3471966
917	1	155408635	155408635	T	C	exonic	ASH1L	NA	nonsynonymous SNV	ASH1L:NM_018489:exon5:c.A5311G:p.T1771A	exonic	ENSG00000116539	NA	nonsynonymous SNV	ENSG00000116539:ENST00000368346:exon5:c.A5311G:p.T1771A,ENSG00000116539:ENST00000392403:exon5:c.A5311G:p.T1771A	NA	NA	1q22	NA	NA	NA	NA	rs4971053	0.95	0.95	0.946	0.948682	1	1	0.9827	0.8147	1	1	1	0.98	0.82	0.9869	1	0.09	T	0.0	B	0.0	B	0.000	N	0.000	P	0.345	N	-2.27	D	-0.875	T	0.217	T	0.017	1.328	10.36	4.31	0.809	2.263	5.856	1.328107	1.328107	0	0.999535	0.85951	NA	0.971	NA	7.3468984
917	9	98238379	98238379	A	G	exonic	PTCH1	NA	synonymous SNV	PTCH1:NM_000264:exon12:c.T1665C:p.N555N,PTCH1:NM_001083602:exon12:c.T1467C:p.N489N,PTCH1:NM_001083603:exon12:c.T1662C:p.N554N,PTCH1:NM_001083604:exon12:c.T1212C:p.N404N,PTCH1:NM_001083605:exon12:c.T1212C:p.N404N,PTCH1:NM_001083606:exon12:c.T1212C:p.N404N,PTCH1:NM_001083607:exon12:c.T1212C:p.N404N	exonic	ENSG00000185920	NA	synonymous SNV	ENSG00000185920:ENST00000375271:exon6:c.T660C:p.N220N,ENSG00000185920:ENST00000375290:exon9:c.T1302C:p.N434N,ENSG00000185920:ENST00000331920:exon12:c.T1665C:p.N555N,ENSG00000185920:ENST00000375274:exon12:c.T1662C:p.N554N,ENSG00000185920:ENST00000418258:exon12:c.T1212C:p.N404N,ENSG00000185920:ENST00000421141:exon12:c.T1212C:p.N404N,ENSG00000185920:ENST00000429896:exon12:c.T1212C:p.N404N,ENSG00000185920:ENST00000430669:exon12:c.T1467C:p.N489N,ENSG00000185920:ENST00000437951:exon12:c.T1467C:p.N489N	Score=491;Name=lod=132	NA	9q22.32	Score=719;Name=V$HOX13_01	NA	NA	NA	rs1805155	0.12	0.12	0.133	0.111621	0.1093	0.1131	0.0764	0.1687	0.0603	0.12	0.12	0.08	0.14	0.1079	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.575148	1.575148	NA	0.103488	0.184521	NA	0.08	NA	7.3459786
917	6	348906	348906	G	A	intronic	DUSP22	NA	NA	NA	exonic	ENSG00000112679	NA	synonymous SNV	ENSG00000112679:ENST00000604971:exon4:c.G264A:p.P88P,ENSG00000112679:ENST00000605315:exon4:c.G264A:p.P88P,ENSG00000112679:ENST00000603453:exon6:c.G264A:p.P88P,ENSG00000112679:ENST00000419235:exon7:c.G573A:p.P191P	NA	NA	6p25.3	NA	NA	NA	NA	rs11242812	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4882	0.46	.	.	.	.	.	.	.	.	1.000	N	.	.	.	.	-0.990	T	0.016	T	.	-1.077	0.166	-4.87	-1.120	-0.683	2.600	-1.076643	NA	NA	NA	NA	NA	0.471	NA	7.3451333
918	3	63982082	63982082	G	A	exonic	ATXN7	NA	nonsynonymous SNV	ATXN7:NM_001128149:exon8:c.G2149A:p.V717M,ATXN7:NM_001177387:exon11:c.G2584A:p.V862M,ATXN7:NM_000333:exon12:c.G2584A:p.V862M	exonic	ENSG00000163635	NA	nonsynonymous SNV	ENSG00000163635:ENST00000522345:exon1:c.G97A:p.V33M,ENSG00000163635:ENST00000484332:exon8:c.G2149A:p.V717M,ENSG00000163635:ENST00000538065:exon10:c.G2584A:p.V862M,ENSG00000163635:ENST00000487717:exon11:c.G2584A:p.V862M,ENSG00000163635:ENST00000295900:exon12:c.G2584A:p.V862M,ENSG00000163635:ENST00000398590:exon12:c.G2584A:p.V862M	NA	NA	3p14.1	NA	NA	NA	NA	rs3774729	0.44	0.44	0.448	0.4377	0.334	0.4603	0.3429	0.6354	0.3211	0.34	0.5	0.35	0.59	0.3477	0.59	1	T	0.028	B	0.003	B	0.002	N	0.999	P	-0.17	N	0.87	T	-0.951	T	0.000	T	0.248	-0.626	1.225	-1.61	-0.467	-0.265	9.290	-0.625811	NA	1	0.307077	0.557801	ID=COSM1567156,COSM1567155;OCCURENCE=1(large_intestine)	0.384	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116488.2;CLNDSDB=.;CLNDSDBID=.	7.3445564
918	11	48387506	48387506	A	G	intergenic	OR4C45,OR4A47	dist=13507;dist=122839	NA	NA	exonic	ENSG00000176540	NA	nonsynonymous SNV	ENSG00000176540:ENST00000319813:exon1:c.T512C:p.V171A	NA	NA	11p11.2	NA	Name=CTCF	NA	NA	rs72898882	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4891	0.022	0.35	T	.	.	.	.	0.319	N	1.000	N	.	.	1.12	T	-1.016	T	0.063	T	0.066	-0.746	0.828	-2.45	-0.265	-0.032	5.322	-0.746355	NA	0.42	NA	NA	NA	0.029	NA	7.3442334
918	21	37420650	37420650	G	A	exonic	SETD4	NA	synonymous SNV	SETD4:NM_001007259:exon5:c.C252T:p.T84T,SETD4:NM_017438:exon5:c.C252T:p.T84T	exonic	ENSG00000185917	NA	synonymous SNV	ENSG00000185917:ENST00000399215:exon4:c.C252T:p.T84T,ENSG00000185917:ENST00000332131:exon5:c.C252T:p.T84T,ENSG00000185917:ENST00000399207:exon5:c.C252T:p.T84T,ENSG00000185917:ENST00000399208:exon5:c.C252T:p.T84T,ENSG00000185917:ENST00000424303:exon5:c.C252T:p.T84T,ENSG00000185917:ENST00000429161:exon5:c.C252T:p.T84T,ENSG00000185917:ENST00000399201:exon6:c.C180T:p.T60T,ENSG00000185917:ENST00000399205:exon6:c.C180T:p.T60T,ENSG00000185917:ENST00000399212:exon6:c.C180T:p.T60T,ENSG00000185917:ENST00000442559:exon6:c.C180T:p.T60T,ENSG00000185917:ENST00000446166:exon6:c.C180T:p.T60T	Score=435;Name=lod=78	NA	21q22.12	Score=822;Name=V$GR_Q6	NA	NA	NA	rs8738	0.13	0.13	0.117	0.124201	0.0805	0.2103	0.183	0.0076	0.1963	0.09	0.25	0.17	0.02	0.129	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.290721	NA	NA	0.113488	0.026101	NA	0.072	NA	7.3436786
918	14	21831419	21831419	C	T	exonic	SUPT16H	NA	synonymous SNV	SUPT16H:NM_007192:exon12:c.G1368A:p.R456R	exonic	ENSG00000092201	NA	synonymous SNV	ENSG00000092201:ENST00000216297:exon12:c.G1368A:p.R456R	Score=621;Name=lod=446	NA	14q11.2	Score=701;Name=V$PPARG_02	NA	NA	NA	rs61746713	0.05	0.05	0.047	0.0453275	0.1203	NA	0.0389	0.0076	0.0706	0.12	NA	0.04	0.01	0.0862	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.882181	NA	NA	0.119214	0.02769	NA	0.094	NA	7.3409526
918	6	31379817	31379817	T	C	exonic	MICA	NA	nonsynonymous SNV	MICA:NM_000247:exon4:c.T707C:p.I236T,MICA:NM_001177519:exon4:c.T707C:p.I236T	exonic	ENSG00000204520	NA	nonsynonymous SNV	ENSG00000204520:ENST00000421350:exon3:c.T380C:p.I127T,ENSG00000204520:ENST00000449934:exon4:c.T707C:p.I236T	NA	NA	6p21.33	NA	NA	NA	NA	rs1140700	NA	NA	0.384	0.582468	0.5089	0.4216	0.6182	0.7504	0.5716	NA	NA	NA	NA	0.4836	0.59	1	T	0.003	B	0.004	B	0.300	N	1.000	P	.	.	4.31	T	-0.953	T	0.001	T	0.182	-1.915	0.008	-2.39	-0.724	-0.209	0.278	-1.914931	NA	1	NA	NA	NA	0.514	NA	7.3408334
918	20	4163242	4163242	C	T	exonic	SMOX	NA	synonymous SNV	SMOX:NM_001270691:exon5:c.C1116T:p.F372F,SMOX:NM_175839:exon5:c.C1116T:p.F372F,SMOX:NM_175840:exon6:c.C957T:p.F319F,SMOX:NM_175842:exon6:c.C957T:p.F319F	exonic	ENSG00000088826	NA	synonymous SNV	ENSG00000088826:ENST00000457205:exon3:c.C687T:p.F229F,ENSG00000088826:ENST00000305958:exon5:c.C1116T:p.F372F,ENSG00000088826:ENST00000379460:exon5:c.C1116T:p.F372F,ENSG00000088826:ENST00000278795:exon6:c.C957T:p.F319F,ENSG00000088826:ENST00000339123:exon6:c.C957T:p.F319F	Score=638;Name=lod=522	NA	20p13	Score=832;Name=V$TST1_01	NA	NA	NA	rs28927676	0.06	0.06	0.053	0.0563099	0.1332	0.0238	0.0403	0.0061	0.09	0.14	0.02	0.05	0.01	0.086	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.736327	NA	NA	0.107558	0.021562	NA	0.043	NA	7.3399086
918	3	170724955	170724955	C	T	exonic	SLC2A2	NA	synonymous SNV	SLC2A2:NM_000340:exon5:c.G594A:p.T198T	exonic	ENSG00000163581	NA	synonymous SNV	ENSG00000163581:ENST00000461867:exon2:c.G75A:p.T25T,ENSG00000163581:ENST00000382808:exon4:c.G237A:p.T79T,ENSG00000163581:ENST00000314251:exon5:c.G594A:p.T198T	NA	NA	3q26.2	Score=834;Name=V$ATF_01	NA	NA	NA	rs5404	0.13	0.13	0.139	0.151558	0.1103	0.0159	0.1254	0.3086	0.1401	0.11	0.02	0.13	0.28	0.115	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.232423	NA	NA	0.101628	0.281888	NA	0.29	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118389.2;CLNDSDB=.;CLNDSDBID=.	7.3397386
918	10	105882765	105882765	A	G	exonic	SFR1	NA	nonsynonymous SNV	SFR1:NM_001002759:exon2:c.A56G:p.D19G,SFR1:NM_145247:exon2:c.A17G:p.D6G	exonic	ENSG00000156384	NA	nonsynonymous SNV	ENSG00000156384:ENST00000336358:exon1:c.A242G:p.D81G,ENSG00000156384:ENST00000369727:exon2:c.A56G:p.D19G,ENSG00000156384:ENST00000369729:exon2:c.A17G:p.D6G	NA	NA	10q25.1	NA	NA	NA	NA	rs10786783	0.22	0.22	0.225	0.235224	0.161	0.2292	0.1427	0.3926	0.1708	0.15	0.23	0.16	0.36	0.174	0.36	0.12	T	0.705	P	0.439	B	0.340	N	1.000	P	1.1	L	0.32	T	-1.016	T	0.000	T	0.119	2.448	14.14	0.86	0.032	0.609	5.917	2.447906	2.447906	0.1	0.158721	0.341126	NA	0.21	NA	7.3396124
918	19	50412417	50412417	G	A	exonic	NUP62	NA	synonymous SNV	NUP62:NM_001193357:exon2:c.C648T:p.S216S,NUP62:NM_012346:exon2:c.C648T:p.S216S,NUP62:NM_153718:exon2:c.C648T:p.S216S,NUP62:NM_016553:exon3:c.C648T:p.S216S,NUP62:NM_153719:exon3:c.C648T:p.S216S	exonic	ENSG00000213024	NA	synonymous SNV	ENSG00000213024:ENST00000413454:exon2:c.C648T:p.S216S,ENSG00000213024:ENST00000422090:exon2:c.C648T:p.S216S,ENSG00000213024:ENST00000596217:exon2:c.C648T:p.S216S,ENSG00000213024:ENST00000352066:exon3:c.C648T:p.S216S,ENSG00000213024:ENST00000597029:exon3:c.C648T:p.S216S,ENSG00000213024:ENST00000597723:exon3:c.C648T:p.S216S	Score=336;Name=lod=31	NA	19q13.33	NA	Name=Egr-1,Pol2,FOSL1_(SC-183)	Name=2	NA	rs999583	0.86	0.86	0.841	0.860423	0.7783	0.9544	0.8473	0.9221	0.774	0.78	0.95	0.81	0.92	0.7919	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.043378	NA	NA	0.757907	0.904448	NA	0.775	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117865.2;CLNDSDB=.;CLNDSDBID=.	7.3385596
918	16	10995933	10995933	A	G	exonic	CIITA	NA	nonsynonymous SNV	CIITA:NM_000246:exon7:c.A520G:p.R174G	exonic	ENSG00000179583	NA	nonsynonymous SNV	ENSG00000179583:ENST00000324288:exon7:c.A520G:p.R174G,ENSG00000179583:ENST00000576601:exon7:c.A448G:p.R150G	Score=251;Name=lod=14	NA	16p13.13	NA	NA	NA	NA	rs8046121	0.99	0.99	0.989	0.98722	0.999	1	0.9971	0.9539	1	1	1	1	0.96	0.9959	1	0.55	T	0.0	B	0.0	B	.	.	0.000	P	-0.69	N	-0.52	T	-0.976	T	0.000	T	0.409	0.101	4.545	4.09	0.855	1.716	8.293	0.101201	NA	0.58	1	0.950159	NA	0.971	NA	7.3384334
918	1	17030504	17030504	T	A	ncRNA_exonic	ESPNP	NA	NA	NA	ncRNA_exonic	ENSG00000268869	NA	NA	NA	Score=563;Name=lod=258	NA	1p36.13	NA	Name=c-Myc,GATA-1,USF-1,USF1_(SC-8983),ZNF263	Name=20	NA	rs601031	NA	NA	0.252	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3292	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.670215	2.670215	NA	NA	NA	NA	0.159	NA	7.3374666
918	4	2822467	2822467	G	T	exonic	SH3BP2	NA	synonymous SNV	SH3BP2:NM_001122681:exon2:c.G123T:p.L41L,SH3BP2:NM_001145855:exon2:c.G207T:p.L69L,SH3BP2:NM_001145856:exon2:c.G294T:p.L98L,SH3BP2:NM_003023:exon2:c.G123T:p.L41L	exonic	ENSG00000087266	NA	synonymous SNV	ENSG00000087266:ENST00000356331:exon2:c.G123T:p.L41L,ENSG00000087266:ENST00000389838:exon2:c.G123T:p.L41L,ENSG00000087266:ENST00000435136:exon2:c.G123T:p.L41L,ENSG00000087266:ENST00000442312:exon2:c.G207T:p.L69L,ENSG00000087266:ENST00000452765:exon2:c.G123T:p.L41L,ENSG00000087266:ENST00000503393:exon2:c.G294T:p.L98L,ENSG00000087266:ENST00000504294:exon2:c.G123T:p.L41L,ENSG00000087266:ENST00000508385:exon2:c.G123T:p.L41L,ENSG00000087266:ENST00000511747:exon2:c.G123T:p.L41L,ENSG00000087266:ENST00000512014:exon2:c.G123T:p.L41L,ENSG00000087266:ENST00000513020:exon2:c.G123T:p.L41L,ENSG00000087266:ENST00000513095:exon2:c.G123T:p.L41L,ENSG00000087266:ENST00000515737:exon2:c.G123T:p.L41L,ENSG00000087266:ENST00000502260:exon3:c.G123T:p.L41L,ENSG00000087266:ENST00000503219:exon3:c.G123T:p.L41L	Score=576;Name=lod=291	NA	4p16.3	Score=764;Name=V$HEN1_02	NA	Name=5	NA	rs231402	0.35	0.35	0.335	0.372005	0.4324	0.4603	0.487	0.1097	0.4918	0.41	0.41	0.46	0.12	0.4514	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.196596	NA	NA	0.445918	0.162052	NA	0.341	NA	7.3369486
918	12	133778796	133778796	C	T	exonic	ZNF268	NA	nonsynonymous SNV	ZNF268:NM_001165884:exon3:c.C100T:p.R34W,ZNF268:NM_001165883:exon4:c.C301T:p.R101W,ZNF268:NM_001165886:exon4:c.C196T:p.R66W,ZNF268:NM_001165885:exon5:c.C397T:p.R133W,ZNF268:NM_001165881:exon6:c.C524T:p.T175M,ZNF268:NM_001165882:exon6:c.C275T:p.T92M,ZNF268:NM_003415:exon6:c.C524T:p.T175M	exonic	ENSG00000090612	NA	nonsynonymous SNV	ENSG00000090612:ENST00000536899:exon3:c.C100T:p.R34W,ENSG00000090612:ENST00000537565:exon3:c.C41T:p.T14M,ENSG00000090612:ENST00000539248:exon4:c.C301T:p.R101W,ENSG00000090612:ENST00000542711:exon4:c.C196T:p.R66W,ENSG00000090612:ENST00000541211:exon5:c.C397T:p.R133W,ENSG00000090612:ENST00000228289:exon6:c.C524T:p.T175M,ENSG00000090612:ENST00000500625:exon6:c.C275T:p.T92M,ENSG00000090612:ENST00000536435:exon6:c.C524T:p.T175M	NA	NA	12q24.33	NA	NA	NA	NA	rs7975069	0.29	0.29	0.31	0.296925	0.3469	0.1111	0.2579	0.4478	0.2607	0.35	0.08	0.27	0.45	0.3188	0.45	.	.	0.002	B	0.001	B	.	.	1.000	P	0.345	N	3.05	T	-0.938	T	0.000	T	0.077	-1.409	0.022	-0.175	-0.449	-1.204	5.107	-1.408633	NA	0.24	0.330811	0.408043	NA	0.304	NA	7.3368224
918	17	42989088	42989088	C	T	exonic	GFAP	NA	synonymous SNV	GFAP:NM_001131019:exon5:c.G858A:p.R286R,GFAP:NM_001242376:exon5:c.G858A:p.R286R,GFAP:NM_002055:exon5:c.G858A:p.R286R	exonic	ENSG00000131095	NA	synonymous SNV	ENSG00000131095:ENST00000588316:exon4:c.G762A:p.R254R,ENSG00000131095:ENST00000253408:exon5:c.G858A:p.R286R,ENSG00000131095:ENST00000435360:exon5:c.G858A:p.R286R,ENSG00000131095:ENST00000586793:exon5:c.G858A:p.R286R,ENSG00000131095:ENST00000588957:exon5:c.G126A:p.R42R	Score=616;Name=lod=426	NA	17q21.31	NA	NA	NA	NA	rs2289681	0.14	0.14	0.123	0.140775	0.1014	0.1359	0.0937	0.2413	0.0838	0.1	0.13	0.1	0.26	0.1163	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.347191	NA	NA	0.112558	0.241035	NA	0.181	CLINSIG=untested;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000056912.1;CLNDSDB=.;CLNDSDBID=.	7.3364086
918	20	25260931	25260931	A	G	exonic	PYGB	NA	synonymous SNV	PYGB:NM_002862:exon10:c.A1122G:p.A374A	exonic	ENSG00000100994	NA	synonymous SNV	ENSG00000100994:ENST00000216962:exon10:c.A1122G:p.A374A	NA	NA	20p11.21	Score=765;Name=V$HTF_01	Name=HA-E2F1,p300,GR	Name=12	NA	rs2227890	0.55	0.55	0.554	0.537141	0.4334	0.9107	0.3473	0.4523	0.5082	0.44	0.93	0.35	0.45	0.4611	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.546982	NA	NA	0.436512	0.431911	ID=COSM443571;OCCURENCE=1(breast)	0.486	NA	7.3356546
918	8	144811338	144811338	C	G	exonic	FAM83H	NA	nonsynonymous SNV	FAM83H:NM_198488:exon3:c.G603C:p.Q201H	exonic	ENSG00000180921	NA	nonsynonymous SNV	ENSG00000180921:ENST00000388913:exon3:c.G603C:p.Q201H	Score=483;Name=lod=122	NA	8q24.3	Score=843;Name=V$USF_01	NA	NA	NA	rs9969600	1	1	1	0.998602	1	1	1	0.9947	1	1	1	1	1	0.9992	1	0.86	T	0.0	B	0.0	B	0.011	N	1.000	P	1.625	L	2.72	T	-0.900	T	0.000	T	0.185	-0.516	1.644	2.28	0.009	-0.006	7.129	-0.515703	NA	1	0.999045	0.999519	NA	1	NA	7.3350884
919	16	27772901	27772901	G	A	exonic	KIAA0556	NA	nonsynonymous SNV	KIAA0556:NM_015202:exon19:c.G3799A:p.A1267T	exonic	ENSG00000047578	NA	nonsynonymous SNV	ENSG00000047578:ENST00000261588:exon19:c.G3799A:p.A1267T	Score=479;Name=lod=118	NA	16p12.1	NA	NA	NA	NA	rs4787984	1	1	1	0.9998	1	1	0.9986	1	1	1	1	1	1	0.9995	1	1	T	0.0	B	0.0	B	0.000	N	0.997	P	-3.175	N	2.79	T	-0.986	T	0.000	T	0.074	0.691	7.693	4.56	0.616	7.372	9.831	0.691394	NA	NA	0.99907	1	NA	1	NA	7.3347634
919	1	53553612	53553612	T	C	UTR3	SLC1A7	NM_006671:c.*69A>G	NA	NA	UTR3	ENSG00000162383	ENST00000371494:c.*69A>G	NA	NA	NA	NA	1p32.3	NA	Name=CTCF_(SC-5916),Rad21,CTCF	Name=6	NA	NA	NA	NA	NA	0.000199681	NA	NA	NA	0.0008	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.301796	NA	NA	NA	NA	NA	NA	NA	7.3333334
919	5	149495252	149495252	G	T	UTR3	PDGFRB	NM_002609:c.*74C>A	NA	NA	UTR3	ENSG00000113721	ENST00000261799:c.*74C>A	NA	NA	NA	NA	5q32	NA	Name=GATA-1,ETS1,HMGN3,TAL1_(SC-12984),GABP,Pol2,NRSF,GATA-2,Pol2-4H8,ZBTB7A_(SC-34508),CCNT2,ELF1_(SC-631),THAP1_(SC-98174),USF-1,GATA2_(CG2-96)	Name=8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.280676	NA	NA	NA	NA	NA	NA	NA	7.3333334
919	21	38792632	38792632	C	T	UTR5	DYRK1A	NM_101395:c.-45C>T,NM_130436:c.-45C>T,NM_130438:c.-45C>T,NM_001396:c.-45C>T	NA	NA	UTR5	ENSG00000157540	ENST00000338785:c.-45C>T,ENST00000426672:c.-45C>T,ENST00000455097:c.-45C>T,ENST00000451934:c.-45C>T,ENST00000321219:c.-45C>T,ENST00000339659:c.-45C>T,ENST00000398960:c.-45C>T	NA	NA	Score=665;Name=lod=673	NA	21q22.13	Score=895;Name=V$CEBPB_01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.345192	3.345192	NA	NA	NA	NA	NA	NA	7.3333334
919	7	23761159	23761159	C	T	intronic	STK31	NA	NA	NA	ncRNA_exonic	ENSG00000234800	NA	NA	NA	Score=625;Name=lod=462	NA	7p15.3	NA	NA	Name=14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.240672	NA	NA	NA	NA	NA	NA	NA	7.3333333
919	10	104629733	104629733	G	C	ncRNA_intronic	C10orf32-AS3MT	NA	NA	NA	intronic	ENSG00000214435,ENSG00000270316	NA	NA	NA	NA	NA	10q24.32	NA	Name=TAF1	Name=9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.638717	NA	NA	NA	NA	NA	NA	NA	7.3333333
919	12	8982318	8982318	T	C	intronic	A2ML1	NA	NA	NA	ncRNA_intronic	ENSG00000256661	NA	NA	NA	NA	NA	12p13.31	NA	Name=NRSF	Name=6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.067686	NA	NA	NA	NA	NA	NA	NA	7.3333333
919	20	33063964	33063964	A	G	intronic	ITCH	NA	NA	NA	ncRNA_exonic	ENSG00000181741	NA	NA	NA	Score=545;Name=lod=218	NA	20q11.22	NA	NA	Name=65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.248239	NA	NA	NA	NA	NA	NA	NA	7.3333333
919	22	50956675	50956675	C	T	exonic	NCAPH2	NA	nonsynonymous SNV	NCAPH2:NM_001185011:exon7:c.C614T:p.A205V,NCAPH2:NM_014551:exon7:c.C614T:p.A205V,NCAPH2:NM_152299:exon7:c.C614T:p.A205V	exonic	ENSG00000025770	NA	nonsynonymous SNV	ENSG00000025770:ENST00000523045:exon6:c.C512T:p.A171V,ENSG00000025770:ENST00000299821:exon7:c.C614T:p.A205V,ENSG00000025770:ENST00000395698:exon7:c.C614T:p.A205V,ENSG00000025770:ENST00000395701:exon7:c.C614T:p.A205V,ENSG00000025770:ENST00000420993:exon7:c.C614T:p.A205V	NA	NA	22q13.33	NA	NA	NA	NA	rs139403039	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00009176	0.0005	1	T	0.009	B	0.008	B	0.015	N	1.000	N	0	N	.	.	-1.017	T	0.041	T	0.263	0.698	7.723	1.13	0.195	-0.764	4.575	0.697691	NA	0.3	0.000116	0.000454	ID=COSM1035498,COSM1154045;OCCURENCE=1(endometrium)	NA	NA	7.3331256
919	14	23549797	23549797	T	A	exonic	ACIN1	NA	nonsynonymous SNV	ACIN1:NM_001164815:exon5:c.A801T:p.E267D,ACIN1:NM_001164814:exon6:c.A921T:p.E307D,ACIN1:NM_014977:exon6:c.A921T:p.E307D	exonic	ENSG00000100813	NA	nonsynonymous SNV	ENSG00000100813:ENST00000457657:exon5:c.A801T:p.E267D,ENSG00000100813:ENST00000262710:exon6:c.A921T:p.E307D,ENSG00000100813:ENST00000555053:exon6:c.A921T:p.E307D,ENSG00000100813:ENST00000605057:exon6:c.A747T:p.E249D	NA	NA	14q11.2	NA	NA	NA	NA	rs143040721	NA	NA	NA	0.000199681	0.001	NA	NA	NA	NA	NA	NA	NA	NA	0.00005766	0.0001	0.16	T	0.002	B	0.004	B	0.117	N	1.000	N	0.205	N	2.04	T	-1.017	T	0.025	T	0.124	1.267	10.13	1.3	0.068	-0.562	7.493	1.266771	1.266771	0.04	0.000116	0	NA	NA	NA	7.3321597
919	19	42729069	42729069	C	A	exonic	ZNF526	NA	nonsynonymous SNV	ZNF526:NM_133444:exon3:c.C514A:p.P172T	exonic	ENSG00000167625	NA	nonsynonymous SNV	ENSG00000167625:ENST00000301215:exon3:c.C514A:p.P172T	NA	NA	19q13.2	NA	NA	NA	NA	rs143231579	NA	NA	NA	0.000199681	0.001	NA	NA	NA	NA	NA	NA	NA	NA	0.00006591	0.0003	.	.	0.041	B	0.025	B	0.800	N	1.000	N	1.39	L	3.0	T	-0.961	T	0.022	T	0.232	0.826	8.328	0.807	0.584	0.878	4.251	0.825797	NA	0.02	0.000349	0	NA	NA	NA	7.3319185
919	9	107457275	107457275	A	C	exonic	OR13D1	NA	nonsynonymous SNV	OR13D1:NM_001004484:exon1:c.A573C:p.Q191H	exonic	ENSG00000179055	NA	nonsynonymous SNV	ENSG00000179055:ENST00000318763:exon1:c.A573C:p.Q191H	NA	NA	9q31.1	NA	NA	NA	NA	rs10820709	0.46	0.46	0.444	0.487021	0.3151	0.505	0.4827	0.6778	0.3906	0.33	0.51	0.43	0.64	0.3842	0.64	0.21	T	0.052	B	0.084	B	0.000	D	1.000	P	0	N	9.06	T	-0.957	T	0.000	T	0.092	-0.25	2.797	-0.483	0.074	-0.772	4.664	-0.24997	NA	0.13	0.302558	0.632773	NA	0.391	NA	7.3314754
919	2	152320118	152320118	G	A	exonic	RIF1	NA	nonsynonymous SNV	RIF1:NM_001177665:exon29:c.G4084A:p.V1362M,RIF1:NM_001177663:exon30:c.G4084A:p.V1362M,RIF1:NM_001177664:exon30:c.G4084A:p.V1362M,RIF1:NM_018151:exon30:c.G4084A:p.V1362M	exonic	ENSG00000080345	NA	nonsynonymous SNV	ENSG00000080345:ENST00000243326:exon29:c.G4084A:p.V1362M,ENSG00000080345:ENST00000430328:exon29:c.G4084A:p.V1362M,ENSG00000080345:ENST00000428287:exon30:c.G4084A:p.V1362M,ENSG00000080345:ENST00000444746:exon30:c.G4084A:p.V1362M,ENSG00000080345:ENST00000453091:exon30:c.G4084A:p.V1362M	NA	NA	2q23.3	NA	NA	NA	NA	rs2123465	0.7	0.7	0.683	0.639976	0.6779	0.7579	0.7061	0.5756	0.5194	0.66	0.79	0.71	0.63	0.6615	0.79	0.18	T	0.013	B	0.02	B	0.050	N	1.000	P	0.755	N	1.32	T	-0.972	T	0.000	T	0.019	-0.943	0.354	-5.84	-2.144	-0.424	11.108	-0.943203	NA	0.2	0.662558	0.578792	NA	0.688	NA	7.3313754
919	6	30920890	30920890	G	A	exonic	DPCR1	NA	nonsynonymous SNV	DPCR1:NM_080870:exon3:c.G4178A:p.R1393Q	exonic	ENSG00000168631	NA	nonsynonymous SNV	ENSG00000168631:ENST00000304311:exon3:c.G704A:p.R235Q,ENSG00000168631:ENST00000462446:exon3:c.G4178A:p.R1393Q	NA	NA	6p21.33	NA	NA	NA	NA	rs2240804	0.22	0.22	0.196	0.18151	0.3419	0.1776	0.196	0.0446	0.1953	0.34	0.22	0.19	0.04	0.2982	0.36	0	D	0.35	B	0.141	B	.	.	1.000	P	1.445	L	1.68	T	-1.018	T	0.024	T	0.013	3.793	19.26	-1.63	-0.238	-0.186	4.228	3.793411	3.793411	0	0.362093	0.097594	NA	0.261	NA	7.3311404
919	17	37331345	37331345	A	T	UTR3	CACNB1	NM_000723:c.*101T>A	NA	NA	ncRNA_UTR3	ENSG00000067191	NA	NA	NA	NA	Name=IgG glycosylation	17q12	NA	Name=SMC3_(ab9263),CTCFL_(SC-98982),CTCF,Rad21,Pol2-4H8,ZNF263,CTCF_(SC-5916),CTCF_(C-20),ZBTB7A_(SC-34508)	Name=128	NA	rs523516	0.21	0.21	0.222	0.211462	0.169	0.25	0.1052	0.3321	0.1278	0.16	0.23	0.14	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.375947	1.375947	NA	NA	NA	NA	0.188	NA	7.331
919	19	55087463	55087463	G	C	exonic	LILRA2	NA	nonsynonymous SNV	LILRA2:NM_001130917:exon6:c.G1142C:p.R381P,LILRA2:NM_006866:exon6:c.G1142C:p.R381P	exonic	ENSG00000239998	NA	nonsynonymous SNV	ENSG00000239998:ENST00000391737:exon5:c.G1106C:p.R369P,ENSG00000239998:ENST00000251376:exon6:c.G1142C:p.R381P,ENSG00000239998:ENST00000391738:exon6:c.G1142C:p.R381P,ENSG00000239998:ENST00000251377:exon7:c.G1142C:p.R381P	NA	NA	19q13.42	NA	NA	NA	NA	rs140640200	0.0014	0.0014	NA	0.00519169	0.001	0.001	0.0014	NA	0.0235	0.004	NA	NA	NA	0.001	0.004	.	.	0.0	B	0.001	B	0.101	N	1.000	N	-3.575	N	4.11	T	-0.843	T	0.001	T	0.201	-1.247	0.052	-0.756	0.048	-0.372	2.962	-1.246702	NA	0.53	0.000581	0.000227	NA	NA	NA	7.3307524
919	20	25282944	25282944	A	G	exonic	ABHD12	NA	synonymous SNV	ABHD12:NM_001042472:exon12:c.T1068C:p.D356D,ABHD12:NM_015600:exon12:c.T1068C:p.D356D	exonic	ENSG00000100997	NA	synonymous SNV	ENSG00000100997:ENST00000339157:exon12:c.T1068C:p.D356D,ENSG00000100997:ENST00000376542:exon12:c.T1068C:p.D356D	Score=454;Name=lod=93	NA	20p11.21	Score=860;Name=V$COUP_01	NA	NA	NA	rs10966	0.56	0.56	0.555	0.541534	0.4374	0.9107	0.3516	0.4629	0.5092	0.44	0.93	0.35	0.46	0.4632	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.066021	NA	NA	0.436512	0.450976	NA	0.486	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116214.2;CLNDSDB=.;CLNDSDBID=.	7.3295546
919	11	67397251	67397251	G	C	exonic	NUDT8	NA	synonymous SNV	NUDT8:NM_001243750:exon1:c.C132G:p.V44V,NUDT8:NM_181843:exon1:c.C132G:p.V44V	exonic	ENSG00000167799	NA	synonymous SNV	ENSG00000167799:ENST00000301490:exon1:c.C132G:p.V44V,ENSG00000167799:ENST00000376693:exon1:c.C132G:p.V44V	Score=565;Name=lod=263	NA	11q13.2	NA	Name=TAF1,Pol2,CCNT2,HEY1,TBP,Sin3Ak-20,Pol2-4H8	NA	NA	rs17851655	0.14	0.14	0.115	0.14976	0.0944	0.0704	0.0937	0.289	0.1401	0.09	0.08	0.1	0.29	0.1462	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.320809	1.320809	NA	0.096968	0.197001	NA	0.007	NA	7.3290986
919	17	72588326	72588326	A	C	exonic	C17orf77,CD300LD	NA	nonsynonymous SNV	CD300LD:NM_001115152:exon1:c.T16G:p.S6A,C17orf77:NM_152460:exon3:c.A141C:p.R47S	exonic	ENSG00000182352,ENSG00000204345	NA	nonsynonymous SNV	ENSG00000204345:ENST00000375352:exon1:c.T16G:p.S6A,ENSG00000182352:ENST00000328023:exon2:c.A141C:p.R47S,ENSG00000182352:ENST00000392620:exon3:c.A141C:p.R47S	NA	NA	17q25.1	NA	NA	Name=8	NA	rs493430	0.66	0.66	0.671	0.674321	0.675	0.5714	0.5533	0.8298	0.6554	0.69	0.55	0.56	0.83	0.6633	0.83	1	T	0.0	B	0.0	B	0.267	N	1.000	P	.	.	3.91	T	-1.010	T	0.000	T	0.023	1.013	9.137	2.12	0.142	-0.793	3.455	1.01284	NA	0.05	0.666279	0.810259	ID=COSM1130171,COSM1130172;OCCURENCE=1(prostate)	0.696	NA	7.3287544
919	21	37444973	37444973	C	T	exonic	CBR1	NA	synonymous SNV	CBR1:NM_001757:exon3:c.C627T:p.A209A	exonic	ENSG00000159228	NA	synonymous SNV	ENSG00000159228:ENST00000290349:exon3:c.C627T:p.A209A	Score=313;Name=lod=25	NA	21q22.12	Score=749;Name=V$STAT5A_02	NA	NA	NA	rs20572	0.13	0.13	0.118	0.1252	0.0875	0.2133	0.1772	0.003	0.2014	0.1	0.25	0.16	0.01	0.1327	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.953136	NA	NA	0.117791	0.024966	NA	0.072	NA	7.3286756
919	19	23556550	23556550	G	A	exonic	ZNF91	NA	nonsynonymous SNV	ZNF91:NM_003430:exon3:c.C247T:p.P83S	exonic	ENSG00000167232	NA	nonsynonymous SNV	ENSG00000167232:ENST00000300619:exon3:c.C247T:p.P83S,ENSG00000167232:ENST00000599743:exon3:c.C247T:p.P83S	NA	NA	19p12	NA	NA	NA	NA	rs148956643	0.01	0.01	0.009	0.0145767	NA	NA	0.0072	0.0514	NA	NA	NA	0.01	0.05	0.0047	0.05	0.5	T	0.105	B	0.02	B	.	.	1.000	N	1.845	L	3.38	T	-0.918	T	0.003	T	0.07	-2.231	0.005	-0.317	-1.052	-0.167	.	-2.230572	NA	0.2	0.000116	0.047706	NA	0.014	NA	7.3285174
919	17	73487830	73487830	A	G	exonic	KIAA0195	NA	nonsynonymous SNV	KIAA0195:NM_014738:exon14:c.A1445G:p.N482S	exonic	ENSG00000177728	NA	nonsynonymous SNV	ENSG00000177728:ENST00000580918:exon3:c.A329G:p.N110S,ENSG00000177728:ENST00000579208:exon6:c.A398G:p.N133S,ENSG00000177728:ENST00000375248:exon13:c.A1475G:p.N492S,ENSG00000177728:ENST00000314256:exon14:c.A1445G:p.N482S	NA	NA	17q25.1	NA	NA	NA	NA	rs35709918	0.01	0.01	0.014	0.0119808	0.001	NA	0.0029	0.0431	NA	NA	NA	NA	0.04	0.0042	0.048	0.34	T	0.0	B	0.001	B	0.004	N	1.000	N	0.41	N	0.96	T	-1.071	T	0.011	T	0.032	-0.559	1.475	0.761	-0.172	0.153	10.918	-0.558834	NA	0.39	0.000581	0.048116	NA	NA	NA	7.3275524
919	15	25926179	25926179	C	T	exonic	ATP10A	NA	nonsynonymous SNV	ATP10A:NM_024490:exon18:c.G3535A:p.A1179T	exonic	ENSG00000206190	NA	nonsynonymous SNV	ENSG00000206190:ENST00000356865:exon18:c.G3535A:p.A1179T	NA	NA	15q12	NA	NA	NA	NA	rs2076744	0.29	0.29	0.283	0.282149	0.1441	0.2599	0.3516	0.4735	0.1391	0.14	0.3	0.33	0.49	0.2016	0.49	0.1	T	0.644	P	0.095	B	0.055	N	1.000	P	0.115	N	0.94	T	-0.912	T	0.000	T	0.099	0.782	8.127	0.298	0.111	0.681	1.590	0.782181	NA	0.05	0.160233	0.417385	ID=COSM1372118;OCCURENCE=1(large_intestine)	0.326	NA	7.3274004
919	19	38817876	38817876	G	A	exonic	KCNK6	NA	nonsynonymous SNV	KCNK6:NM_004823:exon3:c.G775A:p.V259M	exonic	ENSG00000099337	NA	nonsynonymous SNV	ENSG00000099337:ENST00000263372:exon3:c.G775A:p.V259M	NA	NA	19q13.2	NA	NA	NA	NA	rs34989303	0.15	0.15	0.128	0.15655	0.1829	0.1478	0.2378	0.0507	0.2239	0.18	0.15	0.24	0.05	0.1703	0.24	0.09	T	0.801	P	0.426	B	0.002	N	1.000	P	0.145	N	1.86	T	-0.984	T	0.000	T	0.087	1.937	12.43	0.581	0.228	-0.109	3.891	1.93668	1.93668	0.23	0.152791	0.074217	NA	0.116	NA	7.3273424
919	10	20506418	20506418	G	A	exonic	PLXDC2	NA	nonsynonymous SNV	PLXDC2:NM_032812:exon11:c.G1186A:p.V396I	exonic	ENSG00000120594	NA	nonsynonymous SNV	ENSG00000120594:ENST00000377242:exon10:c.G1039A:p.V347I,ENSG00000120594:ENST00000377252:exon11:c.G1186A:p.V396I	NA	NA	10p12.31	NA	NA	NA	NA	rs3817405	0.56	0.56	0.615	0.566294	0.7048	0.3085	0.4481	0.7095	0.5798	0.7	0.33	0.47	0.67	0.6158	0.7	0.44	T	0.003	B	0.002	B	0.194	N	1.000	P	1.39	L	-1.0	T	-1.011	T	0.000	T	0.026	-0.421	2.036	-11.1	-2.080	-2.181	4.875	-0.42112	NA	0.39	0.686395	0.692238	NA	0.63	NA	7.3263384
919	2	238253149	238253149	G	A	exonic	COL6A3	NA	synonymous SNV	COL6A3:NM_057166:exon33:c.C5691T:p.N1897N,COL6A3:NM_057167:exon35:c.C6894T:p.N2298N,COL6A3:NM_004369:exon36:c.C7512T:p.N2504N	exonic	ENSG00000163359	NA	synonymous SNV	ENSG00000163359:ENST00000472056:exon33:c.C5691T:p.N1897N,ENSG00000163359:ENST00000409809:exon34:c.C6894T:p.N2298N,ENSG00000163359:ENST00000346358:exon35:c.C6912T:p.N2304N,ENSG00000163359:ENST00000347401:exon35:c.C6909T:p.N2303N,ENSG00000163359:ENST00000353578:exon35:c.C6894T:p.N2298N,ENSG00000163359:ENST00000295550:exon36:c.C7512T:p.N2504N	NA	NA	2q37.3	Score=772;Name=V$HOX13_01	NA	NA	NA	rs2646258	0.1	0.1	0.093	0.108427	0.1282	0.0536	0.1729	0.09	0.1237	0.13	0.05	0.16	0.09	0.1085	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.357619	NA	NA	0.104884	0.091693	NA	0.087	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000080994.3;CLNDSDB=.;CLNDSDBID=.	7.3250826
920	3	164730804	164730804	T	C	exonic	SI	NA	synonymous SNV	SI:NM_001041:exon34:c.A4026G:p.T1342T	exonic	ENSG00000090402	NA	synonymous SNV	ENSG00000090402:ENST00000264382:exon34:c.A4026G:p.T1342T	Score=466;Name=lod=104	NA	3q26.1	Score=902;Name=V$SRY_02	NA	NA	NA	rs74648160	0.09	0.09	0.085	0.0986422	0.1083	0.0794	0.0706	0.0703	0.1667	0.09	0.08	0.09	0.09	0.1128	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.042303	NA	NA	0.12093	0.080572	NA	0.08	NA	7.3246366
920	6	31379931	31379931	G	A	exonic	MICA	NA	nonsynonymous SNV	MICA:NM_000247:exon4:c.G821A:p.R274Q,MICA:NM_001177519:exon4:c.G821A:p.R274Q	exonic	ENSG00000204520	NA	nonsynonymous SNV	ENSG00000204520:ENST00000421350:exon3:c.G494A:p.R165Q,ENSG00000204520:ENST00000449934:exon4:c.G821A:p.R274Q	NA	Name=Rheumatoid arthritis	6p21.33	NA	NA	NA	NA	rs1063635	NA	NA	0.524	0.583267	0.5089	0.4226	0.6196	0.7519	0.5716	NA	NA	NA	NA	0.5	0.53	0.41	T	0.029	B	0.01	B	0.756	N	1.000	P	.	.	4.17	T	-0.916	T	0.002	T	0.119	-0.773	0.751	-0.104	-0.066	-0.399	1.336	-0.772915	NA	1	NA	NA	NA	0.478	NA	7.3244334
920	20	1961134	1961134	A	G	exonic	PDYN	NA	synonymous SNV	PDYN:NM_001190892:exon3:c.T600C:p.H200H,PDYN:NM_001190899:exon3:c.T600C:p.H200H,PDYN:NM_001190898:exon4:c.T600C:p.H200H,PDYN:NM_001190900:exon4:c.T600C:p.H200H,PDYN:NM_024411:exon4:c.T600C:p.H200H	exonic	ENSG00000101327	NA	synonymous SNV	ENSG00000101327:ENST00000539905:exon3:c.T600C:p.H200H,ENSG00000101327:ENST00000217305:exon4:c.T600C:p.H200H,ENSG00000101327:ENST00000540134:exon4:c.T600C:p.H200H	Score=603;Name=lod=376	NA	20p13	Score=794;Name=V$XBP1_01	NA	NA	NA	rs6045819	0.13	0.13	0.125	0.130192	0.1103	NA	0.1037	0.32	0.047	0.1	NA	0.1	0.35	0.1109	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.782228	NA	NA	0.121744	0.273037	NA	0.087	NA	7.3237226
920	1	120341126	120341126	T	G	exonic	REG4	NA	nonsynonymous SNV	REG4:NM_032044:exon5:c.A403C:p.N135H,REG4:NM_001159352:exon6:c.A403C:p.N135H	exonic	ENSG00000134193	NA	nonsynonymous SNV	ENSG00000134193:ENST00000256585:exon5:c.A403C:p.N135H,ENSG00000134193:ENST00000354219:exon6:c.A403C:p.N135H	NA	NA	1p12	NA	NA	NA	NA	rs34996202	0.03	0.03	0.038	0.0315495	0.001	NA	0.0115	0.1127	NA	0.0013	NA	0.02	0.14	0.0086	0.14	0.75	T	0.0	B	0.006	B	0.368	N	1.000	P	0.08	N	2.17	T	-0.982	T	0.008	T	0.031	2.324	13.73	-1.1	-0.034	-0.009	6.555	2.324234	2.324234	0.03	0.000233	0.087608	NA	0.029	NA	7.3235004
920	9	21239552	21239552	C	T	exonic	IFNA14	NA	nonsynonymous SNV	IFNA14:NM_002172:exon1:c.G383A:p.G128E	exonic	ENSG00000228083	NA	nonsynonymous SNV	ENSG00000228083:ENST00000380222:exon1:c.G383A:p.G128E	NA	NA	9p21.3	NA	NA	NA	NA	rs28383770	0.0027	0.0027	0.002	0.00239617	0.003	NA	0.0086	0.0008	0.002	0.0026	NA	0.01	0.002	0.0023	0.01	0.07	T	0.002	B	0.027	B	0.677	N	1.000	N	1.54	L	3.5	T	-0.976	T	0.013	T	0.154	0.683	7.653	-0.705	-0.028	-0.575	6.54	0.68335	NA	0.07	0.004651	0	NA	NA	NA	7.3233824
920	1	248458766	248458766	T	C	exonic	OR2T12	NA	nonsynonymous SNV	OR2T12:NM_001004692:exon1:c.A115G:p.S39G	exonic	ENSG00000177201	NA	nonsynonymous SNV	ENSG00000177201:ENST00000317996:exon1:c.A115G:p.S39G	NA	NA	1q44	NA	NA	NA	NA	rs41310573	0.01	0.01	0	0.00758786	0.005	0.001	0.0043	0.0219	NA	0.01	NA	0.01	0.03	0.0029	0.03	1	T	0.0	B	0.0	B	0.199	N	1.000	N	-2.915	N	8.1	T	-0.950	T	0.000	T	0.093	-1.437	0.02	1.55	-0.159	0.656	7.423	-1.436879	NA	1	0.002442	0.008625	ID=COSM1341135;OCCURENCE=1(large_intestine)	NA	NA	7.3229914
920	4	17818885	17818885	T	C	exonic	NCAPG	NA	synonymous SNV	NCAPG:NM_022346:exon6:c.T777C:p.D259D	exonic	ENSG00000109805	NA	nonsynonymous SNV	ENSG00000109805:ENST00000514176:exon5:c.T692C:p.M231T	Score=483;Name=lod=122	NA	4p15.31	NA	Name=FOXA1_(C-20),SMC3_(ab9263),Rad21,CTCF_(C-20),CTCF	Name=141	NA	rs2302212	0.36	0.36	0.346	0.346446	0.5984	0.2163	0.4568	0.1029	0.4724	0.59	0.21	0.46	0.1	0.5024	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.465434	1.465434	NA	0.576395	0.171357	ID=COSM1428600;OCCURENCE=1(large_intestine)	0.377	NA	7.322805
920	11	93529655	93529655	G	A	exonic	MED17	NA	synonymous SNV	MED17:NM_004268:exon7:c.G1092A:p.P364P	exonic	ENSG00000042429	NA	synonymous SNV	ENSG00000042429:ENST00000251871:exon7:c.G1092A:p.P364P	Score=602;Name=lod=373	NA	11q21	NA	NA	NA	NA	rs34057693	0.12	0.12	0.123	0.113219	0.1153	0.1419	0.072	0.1036	0.1237	0.12	0.15	0.09	0.11	0.1185	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.639724	NA	NA	0.110517	0.10836	NA	0.181	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117605.2;CLNDSDB=.;CLNDSDBID=.	7.3223496
920	8	144992103	144992103	T	C	exonic	PLEC	NA	synonymous SNV	PLEC:NM_201378:exon32:c.A11844G:p.T3948T,PLEC:NM_201379:exon32:c.A11820G:p.T3940T,PLEC:NM_201380:exon32:c.A12297G:p.T4099T,PLEC:NM_201381:exon32:c.A11790G:p.T3930T,PLEC:NM_201382:exon32:c.A11886G:p.T3962T,PLEC:NM_201383:exon32:c.A11898G:p.T3966T,PLEC:NM_201384:exon32:c.A11886G:p.T3962T,PLEC:NM_000445:exon33:c.A11967G:p.T3989T	exonic	ENSG00000178209	NA	synonymous SNV	ENSG00000178209:ENST00000322810:exon32:c.A12297G:p.T4099T,ENSG00000178209:ENST00000345136:exon32:c.A11886G:p.T3962T,ENSG00000178209:ENST00000354589:exon32:c.A11886G:p.T3962T,ENSG00000178209:ENST00000354958:exon32:c.A11820G:p.T3940T,ENSG00000178209:ENST00000356346:exon32:c.A11844G:p.T3948T,ENSG00000178209:ENST00000357649:exon32:c.A11898G:p.T3966T,ENSG00000178209:ENST00000398774:exon32:c.A11790G:p.T3930T,ENSG00000178209:ENST00000527096:exon32:c.A11955G:p.T3985T,ENSG00000178209:ENST00000436759:exon33:c.A11967G:p.T3989T	NA	NA	8q24.3	NA	Name=Pol2	Name=2	NA	rs6558406	0.47	0.47	0.486	0.490415	0.4563	0.1538	0.3775	0.916	0.3773	0.45	0.17	0.4	0.9	0.4343	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.935124	NA	NA	0.453835	0.857448	ID=COSM454175,COSM1489094,COSM454174;OCCURENCE=1(breast)	0.543	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000078840.3;CLNDSDB=.;CLNDSDBID=.	7.3222316
920	21	46057806	46057806	G	A	exonic	KRTAP10-10	NA	nonsynonymous SNV	KRTAP10-10:NM_181688:exon1:c.G472A:p.V158M	exonic	ENSG00000221859	NA	nonsynonymous SNV	ENSG00000221859:ENST00000380095:exon1:c.G472A:p.V158M	NA	NA	21q22.3	NA	NA	NA	NA	rs4818950	0.62	0.62	0.593	0.603435	0.6928	0.6667	0.6671	0.4342	0.6299	0.69	0.65	0.67	0.45	0.6514	0.69	0.1	T	0.642	P	0.574	P	.	.	1.000	P	1.7	L	4.92	T	-1.089	T	0.000	T	0.036	-0.722	0.902	-0.278	-0.309	-1.385	3.081	-0.721876	NA	0.04	0.667209	0.46709	NA	0.486	NA	7.3219244
920	21	46011583	46011583	G	T	exonic	KRTAP10-6	NA	stopgain	KRTAP10-6:NM_198688:exon1:c.C783A:p.C261X	exonic	ENSG00000188155	NA	stopgain	ENSG00000188155:ENST00000400368:exon1:c.C783A:p.C261X	NA	NA	21q22.3	NA	NA	NA	NA	rs233303	0.22	0.22	0.159	0.216254	0.2107	0.3214	0.2248	0.1528	0.1933	0.22	0.29	0.22	0.14	0.2229	0.29	1	T	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	1.542	11.11	-0.354	0.012	-0.199	6.116	1.542055	1.542055	0.05	0.244651	0.16069	NA	0.007	NA	7.321749
920	1	205554095	205554095	A	C	exonic	MFSD4	NA	synonymous SNV	MFSD4:NM_181644:exon5:c.A951C:p.V317V	exonic	ENSG00000174514	NA	synonymous SNV	ENSG00000174514:ENST00000536357:exon4:c.A690C:p.V230V,ENSG00000174514:ENST00000367147:exon5:c.A951C:p.V317V,ENSG00000174514:ENST00000539267:exon5:c.A951C:p.V317V	Score=471;Name=lod=109	NA	1q32.1	NA	Name=CTCF_(SC-5916),CTCF	Name=7	NA	rs7515820	0.36	0.36	0.347	0.359824	0.4483	0.0625	0.4006	0.5469	0.2935	0.47	0.06	0.42	0.51	0.4204	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.578294	1.578294	NA	0.477907	0.522242	NA	0.449	NA	7.3200596
920	1	94342564	94342564	C	A	exonic	DNTTIP2	NA	nonsynonymous SNV	DNTTIP2:NM_014597:exon2:c.G927T:p.E309D	exonic	ENSG00000067334	NA	nonsynonymous SNV	ENSG00000067334:ENST00000359208:exon2:c.G927T:p.E309D,ENSG00000067334:ENST00000436063:exon2:c.G927T:p.E309D	NA	NA	1p22.1	NA	NA	NA	NA	rs3747965	0.34	0.34	0.324	0.344848	0.325	0.5565	0.33	0.0817	0.5133	0.33	0.57	0.34	0.09	0.3538	0.57	0.18	T	0.006	B	0.005	B	0.813	N	1.000	P	1.78	L	1.97	T	-0.977	T	0.018	T	0.021	0.589	7.18	0.373	-0.083	-1.753	4.542	0.589308	NA	0.28	0.335496	0.138205	NA	0.384	NA	7.3190374
920	7	65429359	65429359	G	A	exonic	GUSB	NA	synonymous SNV	GUSB:NM_000181:exon11:c.C1740T:p.Y580Y	exonic	ENSG00000169919	NA	synonymous SNV	ENSG00000169919:ENST00000421103:exon9:c.C1302T:p.Y434Y,ENSG00000169919:ENST00000345660:exon10:c.C1587T:p.Y529Y,ENSG00000169919:ENST00000304895:exon11:c.C1740T:p.Y580Y	Score=456;Name=lod=95	NA	7q11.21	NA	NA	NA	NA	rs1061361	0.12	0.12	0.094	0.142173	0.1064	0.1468	0.2147	0.0825	0.2035	0.09	0.18	0.18	0.05	0.1289	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.443292	NA	NA	0.112378	0.070132	NA	0.203	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000078326.1;CLNDSDB=.;CLNDSDBID=.	7.3189886
920	19	4891564	4891564	C	T	exonic	ARRDC5	NA	nonsynonymous SNV	ARRDC5:NM_001080523:exon3:c.G523A:p.E175K	exonic	ENSG00000205784	NA	nonsynonymous SNV	ENSG00000205784:ENST00000381781:exon3:c.G523A:p.E175K	NA	NA	19p13.3	NA	NA	NA	NA	rs117229323	0.0027	0.0027	0.002	0.00239617	0.006	NA	0.0058	NA	0.002	0.01	NA	0.01	NA	0.0039	0.01	0.57	T	0.003	B	0.003	B	0.005	N	1.000	N	0.975	L	2.12	T	-1.006	T	0.019	T	0.157	-0.329	2.439	0.412	0.339	-0.074	4.368	-0.329008	NA	0.67	0.004565	0.000753	NA	NA	NA	7.3188684
920	9	2116037	2116037	G	A	exonic	SMARCA2	NA	synonymous SNV	SMARCA2:NM_003070:exon25:c.G3672A:p.E1224E,SMARCA2:NM_139045:exon25:c.G3672A:p.E1224E	exonic	ENSG00000080503	NA	synonymous SNV	ENSG00000080503:ENST00000382194:exon24:c.G3672A:p.E1224E,ENSG00000080503:ENST00000349721:exon25:c.G3672A:p.E1224E,ENSG00000080503:ENST00000357248:exon25:c.G3672A:p.E1224E,ENSG00000080503:ENST00000382203:exon25:c.G3672A:p.E1224E	Score=514;Name=lod=164	NA	9p24.3	NA	NA	NA	NA	rs6601	0.2	0.2	0.224	0.235423	0.1024	0.0188	0.1009	0.6838	0.0849	0.1	0.02	0.1	0.65	0.138	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.537707	NA	NA	0.107442	0.58148	NA	0.232	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000114289.2;CLNDSDB=.;CLNDSDBID=.	7.3188246
920	1	168013876	168013876	G	A	exonic	DCAF6	NA	nonsynonymous SNV	DCAF6:NM_001017977:exon13:c.G1666A:p.A556T,DCAF6:NM_001198957:exon14:c.G1804A:p.A602T,DCAF6:NM_018442:exon14:c.G1726A:p.A576T,DCAF6:NM_001198956:exon15:c.G1897A:p.A633T	exonic	ENSG00000143164	NA	nonsynonymous SNV	ENSG00000143164:ENST00000312263:exon13:c.G1666A:p.A556T,ENSG00000143164:ENST00000367843:exon14:c.G1726A:p.A576T,ENSG00000143164:ENST00000432587:exon14:c.G1804A:p.A602T,ENSG00000143164:ENST00000367840:exon15:c.G1897A:p.A633T	NA	NA	1q24.2	NA	NA	NA	NA	rs113151068	0.0037	0.0037	NA	0.00199681	0.007	NA	0.0043	NA	NA	0.01	NA	0.01	NA	0.0026	0.01	0.58	T	0.044	B	0.022	B	0.054	N	1.000	N	0	N	1.45	T	-0.971	T	0.009	T	0.093	1.73	11.75	-1.27	-0.094	-0.343	1.901	1.730334	1.730334	0.15	0.005116	0.000227	NA	NA	NA	7.3186174
920	3	32859520	32859520	C	T	UTR5	TRIM71	NM_001039111:c.-53C>T	NA	NA	UTR5	ENSG00000206557	ENST00000383763:c.-53C>T	NA	NA	Score=527;Name=lod=185	NA	3p22.3	NA	Name=Pol2,ZNF263,TAF1	Name=24	NA	rs75296584	0.03	0.03	0.031	0.0347444	0.0149	0.122	NA	NA	0.0368	0.01	0.1	NA	NA	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.234287	1.234287	NA	NA	NA	NA	0.014	NA	7.3184334
921	6	12124587	12124587	C	G	exonic	HIVEP1	NA	nonsynonymous SNV	HIVEP1:NM_002114:exon4:c.C4559G:p.A1520G	exonic	ENSG00000095951	NA	nonsynonymous SNV	ENSG00000095951:ENST00000379388:exon4:c.C4559G:p.A1520G	NA	NA	6p24.1	NA	NA	NA	NA	rs2228212	0.27	0.27	0.245	0.248003	0.3439	0.1796	0.3141	0.1982	0.2403	0.36	0.16	0.32	0.21	0.3199	0.36	.	.	0.091	B	0.016	B	0.057	N	1.000	P	0.69	N	3.03	T	-0.936	T	0.005	T	0.04	0.765	8.046	-3.84	-0.373	-0.720	7.178	0.764953	NA	0.53	0.354804	0.209296	NA	0.159	NA	7.3147294
921	4	961373	961373	G	A	exonic	DGKQ	NA	synonymous SNV	DGKQ:NM_001347:exon8:c.C951T:p.V317V	exonic	ENSG00000145214	NA	synonymous SNV	ENSG00000145214:ENST00000273814:exon8:c.C951T:p.V317V	NA	NA	4p16.3	Score=802;Name=V$PAX3_01	NA	NA	NA	rs1377586	0.44	0.44	0.411	0.403954	0.4483	0.3363	0.5519	0.385	0.3487	0.45	0.36	0.56	0.43	0.4446	0.56	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.915	T	0.000	T	.	-0.553	1.498	2.2	0.131	0.653	5.080	-0.55285	NA	NA	0.45907	0.389723	NA	0.152	NA	7.3146966
921	X	140994085	140994085	C	G	exonic	MAGEC1	NA	nonsynonymous SNV	MAGEC1:NM_005462:exon4:c.C895G:p.P299A	exonic	ENSG00000155495	NA	nonsynonymous SNV	ENSG00000155495:ENST00000285879:exon4:c.C895G:p.P299A,ENSG00000155495:ENST00000370511:exon5:c.C301G:p.P101A	NA	NA	Xq27.2	NA	NA	NA	NA	rs176046	0.21	0.21	0.09062	NA	NA	NA	NA	NA	NA	0.22	0.19	0.22	0.21	0.0197	0.22	1	T	0.414	B	0.058	B	.	.	1.000	P	0	N	4.47	T	-0.995	T	0.000	T	0.201	-0.045	3.784	.	0.148	-0.670	2.903	-0.045055	NA	0	NA	NA	NA	0.014	NA	7.3136334
921	9	14801710	14801710	C	A	exonic	FREM1	NA	nonsynonymous SNV	FREM1:NM_144966:exon21:c.G3634T:p.A1212S	exonic	ENSG00000164946	NA	nonsynonymous SNV	ENSG00000164946:ENST00000380880:exon20:c.G3634T:p.A1212S,ENSG00000164946:ENST00000380875:exon21:c.G3634T:p.A1212S,ENSG00000164946:ENST00000380881:exon21:c.G3637T:p.A1213S,ENSG00000164946:ENST00000422223:exon21:c.G3634T:p.A1212S	NA	NA	9p22.3	NA	NA	NA	NA	rs35870000	0.27	0.27	0.249	0.259984	0.3579	0.2321	0.3991	0.0681	0.3487	0.35	0.22	0.44	0.09	0.3243	0.44	0.73	T	0.003	B	0.011	B	0.933	N	1.000	P	0.805	L	2.83	T	-0.914	T	0.000	T	0.074	1.191	9.841	1.79	0.542	0.988	2.623	1.191048	NA	0.32	0.338123	0.119373	NA	0.29	NA	7.3130104
921	17	46002744	46002744	G	T	exonic	SP2	NA	synonymous SNV	SP2:NM_003110:exon6:c.G1578T:p.V526V	exonic	ENSG00000167182	NA	synonymous SNV	ENSG00000167182:ENST00000376741:exon6:c.G1578T:p.V526V	Score=585;Name=lod=318	NA	17q21.32	Score=914;Name=V$MYCMAX_02	NA	Name=9	NA	rs1130932	0.51	0.51	0.507	0.502796	0.4583	0.7708	0.4697	0.3805	0.4611	0.44	0.74	0.46	0.39	0.4628	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.062143	NA	NA	0.432674	0.399001	ID=COSM292333;OCCURENCE=1(large_intestine)	0.406	NA	7.3128926
921	6	33139328	33139328	C	T	exonic	COL11A2	NA	synonymous SNV	COL11A2:NM_080679:exon40:c.G2853A:p.P951P,COL11A2:NM_080681:exon41:c.G2916A:p.P972P,COL11A2:NM_080680:exon43:c.G3174A:p.P1058P	exonic	ENSG00000204248	NA	synonymous SNV	ENSG00000204248:ENST00000361917:exon40:c.G2853A:p.P951P,ENSG00000204248:ENST00000374708:exon41:c.G2916A:p.P972P,ENSG00000204248:ENST00000374712:exon41:c.G2931A:p.P977P,ENSG00000204248:ENST00000374713:exon41:c.G3033A:p.P1011P,ENSG00000204248:ENST00000357486:exon42:c.G3111A:p.P1037P,ENSG00000204248:ENST00000374714:exon42:c.G3096A:p.P1032P,ENSG00000204248:ENST00000395197:exon42:c.G2994A:p.P998P,ENSG00000204248:ENST00000341947:exon43:c.G3174A:p.P1058P	Score=634;Name=lod=502	NA	6p21.32	Score=872;Name=V$NFY_01	NA	NA	NA	rs1799910	0.46	0.46	0.501	0.51238	0.4374	0.3423	0.3948	0.6808	0.6207	0.43	0.36	0.35	0.69	0.4642	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.492616	NA	NA	0.452442	0.627553	NA	0.355	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000039835.1;CLNDSDB=.;CLNDSDBID=.	7.3126246
921	6	155775980	155775980	G	T	exonic	NOX3	NA	synonymous SNV	NOX3:NM_015718:exon3:c.C220A:p.R74R	exonic	ENSG00000074771	NA	synonymous SNV	ENSG00000074771:ENST00000159060:exon3:c.C220A:p.R74R	Score=363;Name=lod=40	NA	6q25.3	Score=906;Name=V$MEIS1_01	NA	NA	NA	rs12195525	0.12	0.12	0.113	0.128594	0.1044	0.1171	0.2291	0.1067	0.1237	0.09	0.12	0.19	0.1	0.1376	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.862312	NA	NA	0.112209	0.107127	NA	0.116	NA	7.3124576
921	19	46387344	46387344	G	A	exonic	IRF2BP1	NA	synonymous SNV	IRF2BP1:NM_015649:exon1:c.C1689T:p.F563F	exonic	ENSG00000170604	NA	synonymous SNV	ENSG00000170604:ENST00000302165:exon1:c.C1689T:p.F563F	Score=665;Name=lod=672	NA	19q13.32	Score=818;Name=V$PPARG_03	NA	NA	NA	rs11550348	0.12	0.12	0.133	0.136581	0.1034	0.001	0.1023	0.3185	0.089	0.09	0.0017	0.13	0.3	0.122	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.774692	NA	NA	0.129651	0.286428	NA	0.123	NA	7.3116156
921	5	169028481	169028481	T	C	exonic	SPDL1	NA	nonsynonymous SNV	SPDL1:NM_017785:exon11:c.T1522C:p.Y508H	exonic	ENSG00000040275	NA	nonsynonymous SNV	ENSG00000040275:ENST00000265295:exon11:c.T1522C:p.Y508H	NA	NA	5q35.1	NA	NA	NA	NA	rs3797713	0.65	0.65	0.652	0.656749	0.672	0.7331	0.5965	0.5893	0.6963	0.69	0.72	0.6	0.57	0.6614	0.72	0.57	T	0.0	B	0.0	B	0.322	N	1.000	P	0	N	1.58	T	-0.985	T	0.000	T	0.014	-0.048	3.767	-7.3	-1.851	-0.235	1.078	-0.048465	NA	0.71	0.690349	0.591466	NA	0.587	NA	7.3095844
921	9	96024182	96024182	G	C	exonic	WNK2	NA	synonymous SNV	WNK2:NM_006648:exon12:c.G3153C:p.S1051S	exonic	ENSG00000165238	NA	synonymous SNV	ENSG00000165238:ENST00000297954:exon12:c.G3153C:p.S1051S,ENSG00000165238:ENST00000349097:exon12:c.G1989C:p.S663S,ENSG00000165238:ENST00000395477:exon12:c.G3153C:p.S1051S,ENSG00000165238:ENST00000427277:exon12:c.G1989C:p.S663S	Score=409;Name=lod=61	NA	9q22.31	NA	NA	NA	NA	rs12000967	0.13	0.13	0.151	0.132788	0.1362	0.001	0.1124	0.2973	0.0573	0.14	0.0017	0.13	0.29	0.1114	0.29	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.976	T	0.000	T	.	0.494	6.678	-0.945	-0.302	-0.715	2.084	0.493719	NA	NA	0.10987	0.27089	NA	0.138	NA	7.3091966
921	18	691266	691266	A	G	exonic	ENOSF1	NA	nonsynonymous SNV	ENOSF1:NM_001126123:exon5:c.T188C:p.M63T,ENOSF1:NM_017512:exon6:c.T434C:p.M145T,ENOSF1:NM_202758:exon6:c.T497C:p.M166T	exonic	ENSG00000132199	NA	nonsynonymous SNV	ENSG00000132199:ENST00000583771:exon4:c.T128C:p.M43T,ENSG00000132199:ENST00000383578:exon5:c.T188C:p.M63T,ENSG00000132199:ENST00000251101:exon6:c.T434C:p.M145T,ENSG00000132199:ENST00000340116:exon6:c.T497C:p.M166T	Score=420;Name=lod=68	NA	18p11.32	NA	NA	NA	NA	rs2612086	0.26	0.26	0.264	0.255591	0.3469	0.0942	0.3516	0.2927	0.2096	0.34	0.08	0.34	0.3	0.3185	0.36	0.13	T	0.0	B	0.0	B	0.002	N	0.000	P	-0.205	N	2.04	T	-0.921	T	0.000	T	0.034	0.869	8.524	-1.31	-0.377	-0.106	4.704	0.869414	NA	NA	0.35907	0.305493	NA	0.326	NA	7.3088634
921	7	123264804	123264804	C	T	exonic	ASB15	NA	synonymous SNV	ASB15:NM_080928:exon6:c.C633T:p.V211V	exonic	ENSG00000146809	NA	synonymous SNV	ENSG00000146809:ENST00000275699:exon6:c.C633T:p.V211V,ENSG00000146809:ENST00000447789:exon6:c.C633T:p.V211V,ENSG00000146809:ENST00000540573:exon6:c.C633T:p.V211V,ENSG00000146809:ENST00000434204:exon7:c.C633T:p.V211V,ENSG00000146809:ENST00000451215:exon8:c.C633T:p.V211V,ENSG00000146809:ENST00000451558:exon10:c.C633T:p.V211V	Score=426;Name=lod=72	NA	7q31.32	NA	Name=CTCF,ELF1_(SC-631),Rad21,SMC3_(ab9263),YY1_(C-20),IRF4_(M-17),eGFP-JunD,Znf143_(16618-1-AP),c-Myc,PAX5-C20,CTCF_(C-20),CTCF_(SC-5916),YY1	Name=69	NA	rs11769381	0.44	0.44	0.419	0.469649	0.4324	0.5446	0.4193	0.3033	0.6912	0.43	0.57	0.48	0.29	0.4718	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.498178	NA	NA	0.453605	0.324784	NA	0.312	NA	7.3088616
921	19	3752927	3752927	C	T	exonic	APBA3	NA	nonsynonymous SNV	APBA3:NM_004886:exon7:c.G1073A:p.R358Q	exonic	ENSG00000011132	NA	nonsynonymous SNV	ENSG00000011132:ENST00000316757:exon7:c.G1073A:p.R358Q	NA	NA	19p13.3	NA	NA	NA	NA	rs117197891	0.0032	0.0032	0.007	0.00499201	0.0089	NA	0.0043	0.0008	0.0123	0.01	NA	NA	NA	0.0069	0.01	0.37	T	0.0	B	0.0	B	0.135	N	1.000	N	0.525	N	0.55	T	-1.052	T	0.055	T	0.058	0.458	6.489	-1.63	-0.298	0.035	8.902	0.458359	NA	0.06	0.008958	0.001362	NA	NA	NA	7.3085754
921	10	16562600	16562600	G	A	exonic	C1QL3	NA	synonymous SNV	C1QL3:NM_001010908:exon1:c.C465T:p.H155H	exonic	ENSG00000165985	NA	synonymous SNV	ENSG00000165985:ENST00000298943:exon1:c.C465T:p.H155H	Score=757;Name=lod=1589	NA	10p13	NA	NA	Name=6	NA	rs72772306	0.14	0.14	0.14	0.130192	0.1233	0.1022	0.1182	0.2292	0.0409	0.12	0.11	0.12	0.23	0.1111	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.273095	NA	NA	0.124767	0.213118	NA	0.007	NA	7.3074996
921	17	25621352	25621352	C	T	UTR5	WSB1	NM_134265:c.-70C>T,NM_015626:c.-70C>T	NA	NA	UTR5	ENSG00000109046	ENST00000581440:c.-70C>T,ENST00000262394:c.-70C>T,ENST00000583742:c.-70C>T,ENST00000579733:c.-70C>T,ENST00000583193:c.-70C>T,ENST00000427287:c.-70C>T,ENST00000581185:c.-70C>T,ENST00000348811:c.-70C>T,ENST00000582208:c.-70C>T	NA	NA	Score=378;Name=lod=46	NA	17q11.1	NA	Name=Pol2,CTCF,HNF4G_(SC-6558),HA-E2F1,ZNF263,Pol2-4H8,Pol2(b)	Name=146	NA	rs137948039	0.01	0.01	0.008	0.0117812	0.0149	0.001	0.0115	NA	0.0358	0.01	0.0017	0.02	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.499288	1.499288	NA	0.011628	0.003613	NA	0.007	NA	7.3068054
921	3	52548818	52548818	C	T	exonic	STAB1	NA	synonymous SNV	STAB1:NM_015136:exon35:c.C3780T:p.C1260C	exonic	ENSG00000010327	NA	synonymous SNV	ENSG00000010327:ENST00000321725:exon35:c.C3780T:p.C1260C	Score=346;Name=lod=34	NA	3p21.1	Score=771;Name=V$AHRARNT_02	NA	NA	NA	rs740903	0.12	0.12	0.107	0.163938	0.0934	0.2331	0.1412	0.0461	0.3405	0.08	0.22	0.11	0.07	0.1532	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.333189	1.333189	NA	0.113372	0.067635	NA	0.196	NA	7.3066946
921	1	152957832	152957832	C	A	exonic	SPRR1A	NA	nonsynonymous SNV	SPRR1A:NM_001199828:exon2:c.C126A:p.H42Q,SPRR1A:NM_005987:exon2:c.C126A:p.H42Q	exonic	ENSG00000169474	NA	nonsynonymous SNV	ENSG00000169474:ENST00000368762:exon1:c.C126A:p.H42Q,ENSG00000169474:ENST00000307122:exon2:c.C126A:p.H42Q	Score=414;Name=lod=64	NA	1q21.3	NA	NA	NA	NA	rs1611762	0.54	0.54	0.504	0.505391	0.5348	0.5972	0.4395	0.4523	0.499	0.53	0.63	0.5	0.48	0.4921	0.63	0.2	T	0.166	B	0.056	B	0.442	N	1.000	P	.	.	2.57	T	-0.954	T	0.009	T	0.132	1.119	9.564	1.54	0.397	0.156	7.354	1.119172	NA	0.02	NA	NA	NA	0.442	NA	7.3064334
921	16	1838037	1838037	C	G	exonic	NUBP2	NA	synonymous SNV	NUBP2:NM_012225:exon5:c.C585G:p.T195T	exonic	ENSG00000095906	NA	synonymous SNV	ENSG00000095906:ENST00000543305:exon4:c.C162G:p.T54T,ENSG00000095906:ENST00000568706:exon4:c.C162G:p.T54T,ENSG00000095906:ENST00000262302:exon5:c.C585G:p.T195T,ENSG00000095906:ENST00000562263:exon5:c.C405G:p.T135T,ENSG00000095906:ENST00000565134:exon5:c.C585G:p.T195T,ENSG00000095906:ENST00000565987:exon6:c.C405G:p.T135T	Score=495;Name=lod=137	NA	16p13.3	Score=740;Name=V$PAX4_04	NA	NA	NA	rs2272977	0.13	0.13	0.103	0.111821	0.1233	0.1657	0.0937	0.0726	0.1104	0.12	0.18	0.12	0.09	0.1197	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.964169	NA	NA	0.117326	0.065742	ID=COSM434734;OCCURENCE=1(breast)	0.094	NA	7.3063406
921	1	10421878	10421878	A	G	exonic	KIF1B	NA	synonymous SNV	KIF1B:NM_015074:exon38:c.A4161G:p.P1387P	exonic	ENSG00000054523	NA	synonymous SNV	ENSG00000054523:ENST00000263934:exon38:c.A4161G:p.P1387P,ENSG00000054523:ENST00000377081:exon39:c.A4299G:p.P1433P,ENSG00000054523:ENST00000377086:exon40:c.A4299G:p.P1433P	Score=498;Name=lod=141	NA	1p36.22	NA	NA	NA	NA	rs12125492	0.06	0.06	0.064	0.0802716	0.1223	0.0129	0.0922	0.0045	0.2004	0.13	0.01	0.09	0.01	0.1128	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.412753	1.412753	NA	0.12593	0.020881	NA	0.116	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117407.2;CLNDSDB=.;CLNDSDBID=.	7.3056366
922	17	38122680	38122680	G	T	exonic	GSDMA	NA	nonsynonymous SNV	GSDMA:NM_178171:exon3:c.G382T:p.V128L	exonic	ENSG00000167914	NA	nonsynonymous SNV	ENSG00000167914:ENST00000301659:exon3:c.G382T:p.V128L,ENSG00000167914:ENST00000577447:exon3:c.G382T:p.V128L	NA	NA	17q21.1	NA	NA	NA	NA	rs7212938	0.6	0.6	0.647	NA	NA	NA	NA	NA	NA	0.53	0.55	0.44	0.88	0.5269	0.88	1	T	0.0	B	0.0	B	0.007	N	1.000	P	-2.175	N	3.01	T	-1.033	T	0.000	T	0.23	1.142	9.654	-2.32	-0.902	-0.611	2.818	1.142349	NA	NA	0.501675	0.810311	NA	0.616	NA	7.3047584
922	17	66873743	66873743	G	A	exonic	ABCA8	NA	synonymous SNV	ABCA8:NM_007168:exon31:c.C3996T:p.P1332P	exonic	ENSG00000141338	NA	synonymous SNV	ENSG00000141338:ENST00000269080:exon31:c.C3996T:p.P1332P,ENSG00000141338:ENST00000430352:exon31:c.C4116T:p.P1372P,ENSG00000141338:ENST00000586539:exon33:c.C4116T:p.P1372P	Score=435;Name=lod=78	NA	17q24.2	Score=879;Name=V$CEBPB_02	NA	NA	NA	rs8068987	0.13	0.13	0.128	0.154553	0.1243	0.0952	0.111	0.2292	0.1769	0.11	0.08	0.14	0.2	0.1254	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.271716	NA	NA	0.112326	0.213118	NA	0.152	NA	7.3046406
922	9	117819436	117819436	C	T	exonic	TNC	NA	synonymous SNV	TNC:NM_002160:exon15:c.G4575A:p.T1525T	exonic	ENSG00000041982	NA	synonymous SNV	ENSG00000041982:ENST00000542877:exon10:c.G3483A:p.T1161T,ENSG00000041982:ENST00000340094:exon11:c.G3483A:p.T1161T,ENSG00000041982:ENST00000535648:exon11:c.G3483A:p.T1161T,ENSG00000041982:ENST00000341037:exon13:c.G4302A:p.T1434T,ENSG00000041982:ENST00000350763:exon15:c.G4575A:p.T1525T	Score=588;Name=lod=327	NA	9q33.1	NA	NA	NA	NA	rs17819466	0.06	0.06	0.069	0.0617013	0.1272	0.0079	0.0807	0.0068	0.1104	0.12	0.0035	0.09	0.01	0.1059	0.13	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.046	T	0.001	T	.	-0.015	3.938	0.271	0.111	-0.155	3.823	-0.014771	NA	NA	0.129535	0.022242	NA	0.007	NA	7.3040316
922	19	49377436	49377436	G	C	exonic	PPP1R15A	NA	nonsynonymous SNV	PPP1R15A:NM_014330:exon2:c.G946C:p.A316P	exonic	ENSG00000087074	NA	nonsynonymous SNV	ENSG00000087074:ENST00000200453:exon2:c.G946C:p.A316P	NA	NA	19q13.33	NA	NA	NA	NA	rs556052	0.37	0.37	0.392	0.425719	0.336	0.1151	0.3329	0.7761	0.4305	0.33	0.12	0.34	0.73	0.355	0.73	0.29	T	0.0	B	0.0	B	0.277	N	1.000	P	0.69	N	3.46	T	-0.982	T	0.000	T	0.021	0.887	8.601	1.24	-0.076	2.920	7.939	0.886951	NA	0.17	0.338372	0.724013	NA	0.471	NA	7.3039614
922	17	76471366	76471366	G	A	exonic	DNAH17	NA	synonymous SNV	DNAH17:NM_173628:exon54:c.C8505T:p.D2835D	exonic	ENSG00000187775	NA	synonymous SNV	ENSG00000187775:ENST00000389840:exon54:c.C8463T:p.D2821D,ENSG00000187775:ENST00000585328:exon54:c.C8490T:p.D2830D	Score=459;Name=lod=98	NA	17q25.3	NA	Name=EBF1_(C-8)	NA	NA	rs61746438	0.12	0.12	0.117	0.133387	0.1103	0.1895	0.085	0.0877	0.1953	0.11	0.18	0.09	0.09	0.1335	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.041228	NA	NA	0.119469	0.083824	NA	0.072	NA	7.3033976
922	11	3681519	3681519	T	C	exonic	ART1	NA	nonsynonymous SNV	ART1:NM_004314:exon3:c.T770C:p.L257P	exonic	ENSG00000129744	NA	nonsynonymous SNV	ENSG00000129744:ENST00000250693:exon3:c.T770C:p.L257P	NA	NA	11p15.4	NA	NA	NA	NA	rs2280134	0.55	0.55	0.551	0.551717	0.6998	0.2877	0.8141	0.4463	0.6278	0.69	0.33	0.75	0.43	0.6454	0.75	.	.	0.0	B	0.0	B	0.581	N	1.000	P	-1.935	N	3.19	T	-1.022	T	0.000	T	0.074	1.14	9.645	4.01	1.108	0.913	4.812	1.139928	NA	0.25	0.684737	0.47592	NA	0.507	NA	7.3033964
922	4	55143577	55143577	G	A	exonic	PDGFRA	NA	synonymous SNV	PDGFRA:NM_006206:exon13:c.G1809A:p.A603A	exonic	ENSG00000134853,ENSG00000145216	NA	synonymous SNV	ENSG00000134853:ENST00000257290:exon13:c.G1809A:p.A603A,ENSG00000134853:ENST00000509490:exon13:c.G1809A:p.A603A,ENSG00000145216:ENST00000507166:exon14:c.G1089A:p.A363A	NA	NA	4q12	Score=847;Name=V$IK1_01	Name=NFKB	NA	NA	rs10028020	0.2	0.2	0.204	0.228035	0.1064	0.1726	0.2666	0.3366	0.2362	0.12	0.18	0.22	0.32	0.1583	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.691914	NA	NA	0.099419	0.296414	NA	0.275	NA	7.3025476
922	10	98803252	98803252	G	A	exonic	SLIT1	NA	synonymous SNV	SLIT1:NM_003061:exon19:c.C1872T:p.R624R	exonic	ENSG00000187122	NA	synonymous SNV	ENSG00000187122:ENST00000266058:exon19:c.C1872T:p.R624R,ENSG00000187122:ENST00000314867:exon19:c.C1851T:p.R617R,ENSG00000187122:ENST00000371070:exon19:c.C1872T:p.R624R	Score=614;Name=lod=418	NA	10q24.1	Score=939;Name=V$GATA1_01	NA	NA	NA	rs35388136	0.06	0.06	0.038	0.0467252	0.1262	NA	0.0634	0.0106	0.0501	0.12	NA	0.07	0.02	0.1006	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.073864	NA	NA	0.137442	0.024739	NA	0.007	NA	7.3024246
922	19	50475215	50475215	G	A	ncRNA_intronic	SIGLEC16	NA	NA	NA	ncRNA_exonic	ENSG00000161643	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs12463034	0.21	0.21	NA	0.19389	0.175	0.3313	0.1542	0.1717	0.1299	0.17	0.3	0.17	0.19	0.1895	0.3	0.29	T	.	.	.	.	0.000	N	1.000	P	.	.	.	.	-1.041	T	0.000	T	.	0.223	5.206	-3.83	-3.099	-0.499	5.410	0.223497	NA	0.1	NA	NA	NA	0.116	NA	7.3021666
922	15	33359370	33359370	C	T	exonic	FMN1	NA	nonsynonymous SNV	FMN1:NM_001103184:exon1:c.G716A:p.G239E	exonic	ENSG00000248905	NA	nonsynonymous SNV	ENSG00000248905:ENST00000334528:exon1:c.G716A:p.G239E,ENSG00000248905:ENST00000558197:exon1:c.G716A:p.G239E	NA	NA	15q13.3	Score=890;Name=V$HSF1_01	NA	NA	NA	rs11072170	0.28	0.28	0.262	0.260583	0.3569	0.1478	0.4337	0.1929	0.2464	0.37	0.17	0.43	0.17	0.328	0.43	0.32	T	0.009	B	0.005	B	.	.	.	.	.	.	1.35	T	-0.907	T	0.000	T	0.058	-2.722	0	0.42	0.141	-0.333	6.681	-2.721836	NA	0.19	0.348622	0.189104	ID=COSM147871;OCCURENCE=1(stomach)	0.297	NA	7.2998114
922	1	167787479	167787479	T	C	exonic	ADCY10	NA	nonsynonymous SNV	ADCY10:NM_001167749:exon28:c.A3854G:p.N1285S,ADCY10:NM_018417:exon31:c.A4313G:p.N1438S	exonic	ENSG00000143199	NA	nonsynonymous SNV	ENSG00000143199:ENST00000545172:exon28:c.A3854G:p.N1285S,ENSG00000143199:ENST00000367848:exon31:c.A4037G:p.N1346S,ENSG00000143199:ENST00000367851:exon31:c.A4313G:p.N1438S	NA	NA	1q24.2	NA	NA	NA	NA	rs41270737	0.01	0.01	0.005	0.00479233	0.0129	NA	0.0115	NA	0.0031	0.01	NA	0.01	NA	0.0082	0.014	0.86	T	0.018	B	0.011	B	0.905	N	.	.	0.715	N	-1.02	T	-0.990	T	0.016	T	0.04	-0.493	1.736	0.514	0.088	-0.616	3.882	-0.49291	NA	0	0.013721	0.003404	NA	0.007	NA	7.2985124
922	22	39445554	39445554	G	A	exonic	APOBEC3F	NA	nonsynonymous SNV	APOBEC3F:NM_145298:exon5:c.G691A:p.V231I	exonic	ENSG00000128394	NA	nonsynonymous SNV	ENSG00000128394:ENST00000308521:exon5:c.G691A:p.V231I	NA	NA	22q13.1	NA	NA	NA	NA	rs2076101	0.5	0.5	0.465	0.495407	0.4901	0.7113	0.6182	0.1868	0.6084	0.47	0.71	0.65	0.2	0.516	0.71	0.18	T	0.979	D	0.81	P	.	.	1.000	P	1.765	L	-0.19	T	-0.936	T	0.000	T	0.024	1.631	11.41	0.462	0.212	0.354	3.917	1.630907	1.630907	0.28	0.529651	0.248071	NA	0.428	NA	7.2975824
922	1	24706292	24706292	T	C	exonic	STPG1	NA	nonsynonymous SNV	STPG1:NM_178122:exon4:c.A172G:p.I58V,STPG1:NM_001199012:exon5:c.A313G:p.I105V,STPG1:NM_001199013:exon5:c.A313G:p.I105V,STPG1:NM_001199014:exon6:c.A37G:p.I13V	exonic	ENSG00000001460	NA	nonsynonymous SNV	ENSG00000001460:ENST00000438866:exon1:c.A22G:p.I8V,ENSG00000001460:ENST00000440416:exon3:c.A172G:p.I58V,ENSG00000001460:ENST00000003583:exon4:c.A172G:p.I58V,ENSG00000001460:ENST00000337248:exon5:c.A313G:p.I105V,ENSG00000001460:ENST00000374409:exon5:c.A313G:p.I105V	NA	NA	1p36.11	NA	NA	Name=6	NA	rs1142057	0.4	0.4	0.368	0.365615	0.3549	0.4444	0.4841	0.3086	0.2883	0.37	0.44	0.45	0.35	0.3493	0.45	0.55	T	0.002	B	0.01	B	0.666	N	1.000	P	1.01	L	.	.	-0.925	T	0.000	T	0.065	-1.326	0.032	-0.614	-0.090	-0.059	9.343	-1.32642	NA	0.28	0.332791	0.33409	NA	0.246	NA	7.2963424
922	1	68627568	68627568	C	A	ncRNA_intronic	GNG12-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000234383	NA	NA	NA	Score=782;Name=lod=2014	NA	1p31.3	NA	Name=CTCF	Name=8	NA	rs74081400	0.37	0.37	0.329	0.349441	0.3708	0.3998	0.4539	0.2345	0.3569	0.36	0.41	0.48	0.26	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.670829	1.670829	NA	NA	NA	NA	0.065	NA	7.2958666
922	11	406473	406473	A	C	exonic	SIGIRR	NA	synonymous SNV	SIGIRR:NM_001135053:exon9:c.T945G:p.P315P,SIGIRR:NM_001135054:exon9:c.T945G:p.P315P,SIGIRR:NM_021805:exon9:c.T945G:p.P315P	exonic	ENSG00000185187	NA	synonymous SNV	ENSG00000185187:ENST00000531205:exon8:c.T945G:p.P315P,ENSG00000185187:ENST00000332725:exon9:c.T945G:p.P315P,ENSG00000185187:ENST00000382520:exon9:c.T945G:p.P315P,ENSG00000185187:ENST00000397632:exon9:c.T945G:p.P315P,ENSG00000185187:ENST00000431843:exon9:c.T945G:p.P315P	NA	NA	11p15.5	NA	NA	NA	NA	rs3087588	0.89	0.89	0.845	0.907149	0.7783	0.998	0.8919	0.9115	0.9509	0.78	1	0.88	0.92	0.8314	1	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-1.031	T	0.000	T	.	0.27	5.462	-6.01	-2.206	-3.243	0.384	0.270359	NA	NA	0.761178	0.891542	NA	0.841	NA	7.2957886
923	19	12089364	12089364	G	T	exonic	ZNF763	NA	nonsynonymous SNV	ZNF763:NM_001012753:exon4:c.G634T:p.V212F	exonic	ENSG00000197054,ENSG00000267179	NA	nonsynonymous SNV	ENSG00000197054:ENST00000545530:exon2:c.G259T:p.V87F,ENSG00000197054:ENST00000343949:exon4:c.G634T:p.V212F,ENSG00000197054:ENST00000358987:exon4:c.G625T:p.V209F,ENSG00000197054:ENST00000538752:exon4:c.G685T:p.V229F,ENSG00000267179:ENST00000590798:exon4:c.G685T:p.V229F	NA	NA	19p13.2	NA	NA	NA	NA	rs7249379	NA	NA	NA	0.019369	0.0229	0.006	0.0144	0.0257	0.0245	NA	NA	NA	NA	0.0168	NA	1	T	0.0	B	0.0	B	.	.	0.876	N	-3	N	3.83	T	-0.936	T	0.002	T	0.191	-1.525	0.016	1.28	-0.273	0.923	5.273	-1.525431	NA	1	NA	NA	NA	NA	NA	7.2936334
923	11	7441737	7441737	T	C	exonic	SYT9	NA	synonymous SNV	SYT9:NM_175733:exon6:c.T1338C:p.R446R	exonic	ENSG00000170743	NA	synonymous SNV	ENSG00000170743:ENST00000318881:exon6:c.T1338C:p.R446R	Score=653;Name=lod=599	NA	11p15.4	Score=865;Name=V$RORA1_01	NA	NA	NA	rs11041372	0.11	0.11	0.106	0.105831	0.1352	0.1131	0.1124	0.0749	0.1053	0.13	0.12	0.11	0.06	0.1132	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.133372	2.133372	NA	0.124651	0.075647	NA	0.087	NA	7.2936156
923	16	55601388	55601388	A	G	exonic	CAPNS2	NA	synonymous SNV	CAPNS2:NM_032330:exon1:c.A720G:p.E240E	exonic	ENSG00000256812	NA	synonymous SNV	ENSG00000256812:ENST00000457326:exon1:c.A720G:p.E240E	NA	NA	16q12.2	Score=825;Name=V$AP4_01	Name=Pol2	Name=87	NA	rs1502003	0.42	0.42	0.426	0.422923	0.4632	0.4087	0.353	0.3775	0.5072	0.44	0.41	0.41	0.42	0.4474	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.333295	NA	NA	0.463994	0.402091	NA	0.514	NA	7.2920726
923	1	51121198	51121198	T	C	exonic	FAF1	NA	synonymous SNV	FAF1:NM_007051:exon8:c.A660G:p.V220V	exonic	ENSG00000185104	NA	synonymous SNV	ENSG00000185104:ENST00000494400:exon2:c.A78G:p.V26V,ENSG00000185104:ENST00000396153:exon8:c.A660G:p.V220V,ENSG00000185104:ENST00000371778:exon9:c.A660G:p.V220V	Score=543;Name=lod=215	NA	1p32.3	Score=745;Name=V$MEF2_04	NA	NA	NA	rs11205753	0.06	0.06	0.04	0.0922524	0.1113	0.001	0.0706	0.0182	0.2822	0.11	0.0017	0.08	0.03	0.1349	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.137175	2.137175	NA	0.128953	0.038357	NA	0.072	NA	7.2915136
923	16	30037128	30037128	A	C	exonic	FAM57B	NA	synonymous SNV	FAM57B:NM_031478:exon4:c.T459G:p.G153G	exonic	ENSG00000149926	NA	synonymous SNV	ENSG00000149926:ENST00000564806:exon3:c.T309G:p.G103G,ENSG00000149926:ENST00000279389:exon4:c.T309G:p.G103G,ENSG00000149926:ENST00000380495:exon4:c.T459G:p.G153G	Score=583;Name=lod=313	NA	16p11.2	Score=724;Name=V$PAX4_04	NA	NA	NA	rs11544328	0.43	0.43	0.415	0.440296	0.4652	0.377	0.3833	0.472	0.4775	0.46	0.36	0.42	0.46	0.4445	0.47	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.903	T	0.000	T	.	0.524	6.837	0.696	0.200	-0.388	6.491	0.523609	NA	NA	0.466163	0.471552	NA	0.413	NA	7.2908036
923	12	48151822	48151822	C	G	exonic	RAPGEF3	NA	nonsynonymous SNV	RAPGEF3:NM_001098531:exon2:c.G46C:p.A16P	exonic	ENSG00000079337	NA	nonsynonymous SNV	ENSG00000079337:ENST00000395358:exon2:c.G46C:p.A16P,ENSG00000079337:ENST00000449771:exon2:c.G46C:p.A16P,ENSG00000079337:ENST00000547856:exon2:c.G46C:p.A16P,ENSG00000079337:ENST00000389212:exon3:c.G46C:p.A16P	Score=492;Name=lod=133	NA	12q13.11	NA	NA	NA	NA	rs11168230	0.28	0.28	0.26	0.296925	0.335	0.2004	0.2709	0.2988	0.3732	0.33	0.21	0.28	0.28	0.4054	0.35	0.28	T	0.002	B	0.004	B	.	.	0.000	P	0.55	N	0.02	T	-1.010	T	0.000	T	0.389	3.029	16.11	1.99	0.540	0.843	4.294	3.029273	3.029273	0.06	0.302244	0.271998	NA	0.254	NA	7.2906894
923	1	165532948	165532948	C	T	exonic	LRRC52	NA	nonsynonymous SNV	LRRC52:NM_001005214:exon2:c.C829T:p.R277C	exonic	ENSG00000162763	NA	nonsynonymous SNV	ENSG00000162763:ENST00000294818:exon2:c.C829T:p.R277C	NA	NA	1q24.1	NA	NA	NA	NA	rs115506989	0.01	0.01	0.005	0.00758786	0.0189	NA	0.0159	0.0015	0.0061	0.02	NA	0.02	NA	0.0098	0.022	0.06	T	0.016	B	0.004	B	0.578	N	0.998	N	0.205	N	-0.21	T	-1.038	T	0.058	T	0.05	0.624	7.355	0.939	0.331	0.515	3.465	0.623697	NA	NA	0.015465	0.002043	NA	0.014	NA	7.2891684
923	3	122288314	122288314	A	G	exonic	DTX3L	NA	nonsynonymous SNV	DTX3L:NM_138287:exon3:c.A1378G:p.K460E	exonic	ENSG00000163840	NA	nonsynonymous SNV	ENSG00000163840:ENST00000296161:exon3:c.A1378G:p.K460E	NA	NA	3q21.1	NA	NA	NA	NA	rs34308498	0.01	0.01	0.006	0.00559105	0.0149	NA	0.0086	0.0015	0.0051	0.02	NA	0.01	0.0041	0.0126	0.02	0.28	T	0.325	B	0.014	B	0.005	N	1.000	N	1.845	L	1.55	T	-1.070	T	0.027	T	0.139	2.025	12.73	1.68	0.501	0.159	6.722	2.025361	2.025361	0.38	0.01686	0.002497	NA	0.007	NA	7.2889734
923	7	51096036	51096036	G	C	exonic	COBL	NA	nonsynonymous SNV	COBL:NM_015198:exon10:c.C2757G:p.H919Q	exonic	ENSG00000106078	NA	nonsynonymous SNV	ENSG00000106078:ENST00000431948:exon9:c.C2412G:p.H804Q,ENSG00000106078:ENST00000445054:exon9:c.C2433G:p.H811Q,ENSG00000106078:ENST00000265136:exon10:c.C2757G:p.H919Q,ENSG00000106078:ENST00000395542:exon12:c.C3003G:p.H1001Q	NA	NA	7p12.1	NA	NA	NA	NA	rs2240089	0.2	0.2	0.197	0.200879	0.1889	0.3095	0.1556	0.1104	0.2556	0.19	0.3	0.17	0.12	0.1821	0.3	0.41	T	0.829	P	0.287	B	0.002	N	1.000	P	1.355	L	2.77	T	-0.938	T	0.000	T	0.013	1.156	9.706	0.382	0.139	0.090	8.146	1.155696	NA	0.35	0.173953	0.107354	NA	0.116	NA	7.2883804
923	4	57215803	57215803	G	A	exonic	AASDH	NA	nonsynonymous SNV	AASDH:NM_181806:exon11:c.C2114T:p.A705V	exonic	ENSG00000157426	NA	nonsynonymous SNV	ENSG00000157426:ENST00000434343:exon8:c.C659T:p.A220V,ENSG00000157426:ENST00000513376:exon10:c.C1814T:p.A605V,ENSG00000157426:ENST00000602986:exon10:c.C1655T:p.A552V,ENSG00000157426:ENST00000205214:exon11:c.C2114T:p.A705V,ENSG00000157426:ENST00000451613:exon11:c.C2114T:p.A705V,ENSG00000157426:ENST00000502617:exon11:c.C2114T:p.A705V	NA	NA	4q12	NA	NA	NA	NA	rs150162083	0.01	0.01	0.005	0.0071885	0.0139	NA	0.0029	0.0023	0.0174	0.01	NA	0.0028	0.0041	0.014	0.022	1	T	0.019	B	0.011	B	0.390	N	1.000	N	1.06	L	2.67	T	-0.942	T	0.009	T	0.046	-0.043	3.794	1.47	0.048	0.727	4.369	-0.043162	NA	0.64	0.018721	0.003404	NA	0.014	NA	7.2867124
923	1	45973928	45973928	G	A	exonic	MMACHC	NA	synonymous SNV	MMACHC:NM_015506:exon3:c.G321A:p.V107V	exonic	ENSG00000132763	NA	synonymous SNV	ENSG00000132763:ENST00000401061:exon3:c.G321A:p.V107V	Score=632;Name=lod=495	NA	1p34.1	NA	Name=Pol2	NA	NA	rs2275276	0.49	0.49	0.492	0.47524	0.4771	0.5952	0.4957	0.3654	0.4836	0.47	0.58	0.53	0.39	0.4664	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.594646	NA	NA	0.436974	0.372335	NA	0.42	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000081738.1|RCV000126793.1;CLNDSDB=.|.;CLNDSDBID=.|.	7.2861926
924	3	153840162	153840162	C	T	exonic	ARHGEF26	NA	synonymous SNV	ARHGEF26:NM_001251962:exon2:c.C381T:p.S127S,ARHGEF26:NM_001251963:exon2:c.C381T:p.S127S,ARHGEF26:NM_015595:exon2:c.C381T:p.S127S	exonic	ENSG00000114790	NA	synonymous SNV	ENSG00000114790:ENST00000356448:exon2:c.C381T:p.S127S,ENSG00000114790:ENST00000465093:exon2:c.C381T:p.S127S,ENSG00000114790:ENST00000465817:exon2:c.C381T:p.S127S,ENSG00000114790:ENST00000496710:exon2:c.C381T:p.S127S	NA	NA	3q25.2	Score=762;Name=V$STAT3_01	NA	Name=4	NA	rs13073165	0.22	0.22	0.173	0.201478	0.1064	0.3363	0.3084	0.1135	0.2035	0.11	0.39	0.3	0.14	0.1697	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.181057	NA	NA	0.106061	0.105439	ID=COSM445828,COSM445830,COSM445829;OCCURENCE=1(breast)	0.181	NA	7.2845056
924	11	5528918	5528918	C	T	exonic	UBQLN3	NA	nonsynonymous SNV	UBQLN3:NM_017481:exon2:c.G1871A:p.R624Q	exonic	ENSG00000175520	NA	nonsynonymous SNV	ENSG00000175520:ENST00000311659:exon2:c.G1871A:p.R624Q	NA	NA	11p15.4	NA	NA	NA	NA	rs2227271	0.22	0.22	0.206	0.183906	0.3698	0.0516	0.3329	0.0552	0.1973	0.36	0.07	0.34	0.09	0.3	0.38	0.04	D	0.045	B	0.025	B	0.015	N	1.000	P	0.98	L	1.82	T	-0.933	T	0.000	T	0.036	1.052	9.298	1.23	0.429	0.537	6.845	1.052279	NA	0.13	0.379567	0.101545	ID=COSM429159;OCCURENCE=1(breast)	0.254	NA	7.2839664
924	21	10910311	10910311	T	G	exonic	TPTE	NA	nonsynonymous SNV	TPTE:NM_199260:exon20:c.A1331C:p.Y444S,TPTE:NM_199259:exon21:c.A1391C:p.Y464S,TPTE:NM_199261:exon22:c.A1445C:p.Y482S	exonic	ENSG00000166157	NA	nonsynonymous SNV	ENSG00000166157:ENST00000342420:exon20:c.A1331C:p.Y444S,ENSG00000166157:ENST00000298232:exon21:c.A1391C:p.Y464S,ENSG00000166157:ENST00000361285:exon22:c.A1445C:p.Y482S	NA	NA	21p11.1	NA	NA	NA	NA	rs9996	NA	NA	0.549	0.611222	0.5099	0.5466	0.5288	0.8328	0.5409	NA	NA	NA	NA	0.5396	0.55	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-2.225	N	-1.78	D	-0.862	T	0.100	T	0.174	-3.2	0.001	1.32	0.068	0.267	4.764	-3.199556	NA	1	NA	NA	NA	0.478	NA	7.2838334
924	10	105362209	105362209	T	C	exonic	SH3PXD2A	NA	synonymous SNV	SH3PXD2A:NM_014631:exon14:c.A2682G:p.K894K	exonic	ENSG00000107957	NA	synonymous SNV	ENSG00000107957:ENST00000538130:exon9:c.A2271G:p.K757K,ENSG00000107957:ENST00000540321:exon9:c.A2367G:p.K789K,ENSG00000107957:ENST00000355946:exon14:c.A2682G:p.K894K,ENSG00000107957:ENST00000369774:exon15:c.A2766G:p.K922K	Score=487;Name=lod=127	NA	10q24.33	NA	NA	NA	NA	rs4917396	0.89	0.89	0.915	0.91254	0.7624	0.999	0.8876	0.9743	0.9121	0.77	1	0.86	0.97	0.839	1	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.008	T	0.000	T	.	-1.311	0.035	2.62	0.471	1.153	7.201	-1.311184	NA	NA	0.781744	0.936223	NA	0.884	NA	7.2835226
924	17	76867017	76867017	C	T	exonic	TIMP2	NA	synonymous SNV	TIMP2:NM_003255:exon3:c.G303A:p.S101S	exonic	ENSG00000035862,ENSG00000178404	NA	synonymous SNV	ENSG00000035862:ENST00000586057:exon2:c.G72A:p.S24S,ENSG00000035862:ENST00000592761:exon2:c.G72A:p.S24S,ENSG00000035862:ENST00000262768:exon3:c.G303A:p.S101S,ENSG00000035862:ENST00000536189:exon3:c.G72A:p.S24S,ENSG00000035862:ENST00000585421:exon3:c.G72A:p.S24S,ENSG00000178404:ENST00000586713:exon5:c.G72A:p.S24S	Score=446;Name=lod=87	NA	17q25.3	Score=817;Name=V$CMYB_01	NA	NA	NA	rs2277698	0.15	0.15	0.15	0.16893	0.1252	0.2639	0.1196	0.1006	0.2434	0.13	0.24	0.12	0.12	0.1382	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.486442	1.486442	NA	0.120233	0.095325	NA	0.145	NA	7.2830336
924	1	247835908	247835908	T	A	exonic	OR13G1	NA	nonsynonymous SNV	OR13G1:NM_001005487:exon1:c.A436T:p.M146L	exonic	ENSG00000197437	NA	nonsynonymous SNV	ENSG00000197437:ENST00000359688:exon1:c.A436T:p.M146L	NA	NA	1q44	NA	NA	NA	NA	rs28556931	0.31	0.31	0.317	0.330272	0.3519	0.376	0.2392	0.2995	0.3671	0.35	0.32	0.24	0.28	0.3384	0.36	0.02	D	0.03	B	0.063	B	0.015	N	1.000	P	-1.175	N	1.34	T	-0.918	T	0.000	T	0.143	1.407	10.64	-1.12	-0.302	0.305	0.916	1.406508	1.406508	0.06	0.360233	0.300499	NA	0.377	NA	7.2828004
924	11	48145166	48145166	G	A	exonic	PTPRJ	NA	synonymous SNV	PTPRJ:NM_001098503:exon5:c.G618A:p.E206E,PTPRJ:NM_002843:exon5:c.G618A:p.E206E	exonic	ENSG00000149177	NA	synonymous SNV	ENSG00000149177:ENST00000527952:exon4:c.G354A:p.E118E,ENSG00000149177:ENST00000418331:exon5:c.G618A:p.E206E,ENSG00000149177:ENST00000440289:exon5:c.G618A:p.E206E	Score=333;Name=lod=30	NA	11p11.2	NA	Name=c-Fos	NA	NA	rs2270993	0.15	0.15	0.137	0.155551	0.1183	0.1597	0.1095	0.2337	0.1166	0.12	0.16	0.1	0.23	0.1403	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.605637	NA	NA	0.127617	0.232849	ID=COSM147186;OCCURENCE=1(stomach)	0.167	NA	7.2804496
924	8	139165289	139165289	T	C	exonic	FAM135B	NA	nonsynonymous SNV	FAM135B:NM_015912:exon13:c.A1429G:p.I477V	exonic	ENSG00000147724	NA	nonsynonymous SNV	ENSG00000147724:ENST00000276737:exon13:c.A1429G:p.I477V,ENSG00000147724:ENST00000395297:exon13:c.A1429G:p.I477V	NA	NA	8q24.23	NA	NA	NA	NA	rs7835830	0.72	0.72	0.71	0.718251	0.6869	0.7718	0.7435	0.6785	0.7311	0.69	0.79	0.7	0.72	0.6997	0.79	0.46	T	0.003	B	0.004	B	0.001	N	1.000	P	0.895	L	2.58	T	-0.983	T	0.000	T	0.021	-0.468	1.839	-2.29	-0.180	-1.417	4.473	-0.467949	NA	0.94	0.666868	0.701001	NA	0.79	NA	7.2798654
924	4	9998493	9998493	A	G	exonic	SLC2A9	NA	synonymous SNV	SLC2A9:NM_020041:exon3:c.T322C:p.L108L,SLC2A9:NM_001001290:exon4:c.T235C:p.L79L	exonic	ENSG00000109667	NA	synonymous SNV	ENSG00000109667:ENST00000264784:exon3:c.T322C:p.L108L,ENSG00000109667:ENST00000309065:exon4:c.T235C:p.L79L,ENSG00000109667:ENST00000513129:exon4:c.T235C:p.L79L,ENSG00000109667:ENST00000506583:exon5:c.T235C:p.L79L	Score=446;Name=lod=87	NA	4p16.1	Score=776;Name=V$ER_Q6	Name=FOSL2,FOXA1_(C-20),FOXA1_(SC-101058),GR	Name=43	NA	rs13113918	0.84	0.84	0.845	0.820687	0.8002	0.9722	0.7219	0.7784	0.8129	0.82	0.99	0.73	0.78	0.8015	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.29224	1.29224	NA	0.785349	0.776441	NA	0.841	NA	7.2796176
924	11	1156646	1156646	C	G	intergenic	MUC2,MUC5B	dist=52229;dist=87649	NA	NA	exonic	ENSG00000215182	NA	nonsynonymous SNV	ENSG00000215182:ENST00000534821:exon6:c.C663G:p.S221R,ENSG00000215182:ENST00000356191:exon10:c.C655G:p.R219G	NA	NA	11p15.5	NA	NA	NA	NA	rs35783651	0.12	0.12	0.107	0.103435	0.1998	0.003	0.0965	0.1437	0.0583	0.2	0.0035	0.12	0.14	0.1466	0.21	0.03	D	0.834	P	0.517	P	.	.	.	.	1.59	L	2.23	T	-1.014	T	0.000	T	0.374	-0.877	0.488	0.102	-0.070	0.850	8.805	-0.876505	NA	0.5	0.207538	0.154857	ID=COSM428456;OCCURENCE=2(breast)	0.109	NA	7.2793954
924	21	46927489	46927489	A	G	exonic	COL18A1	NA	synonymous SNV	COL18A1:NM_030582:exon38:c.A3762G:p.T1254T,COL18A1:NM_130445:exon39:c.A3222G:p.T1074T	exonic	ENSG00000182871	NA	synonymous SNV	ENSG00000182871:ENST00000342220:exon19:c.A1275G:p.T425T,ENSG00000182871:ENST00000355480:exon37:c.A3771G:p.T1257T,ENSG00000182871:ENST00000359759:exon37:c.A4476G:p.T1492T,ENSG00000182871:ENST00000400337:exon38:c.A3231G:p.T1077T	NA	NA	21q22.3	NA	Name=ERalpha_a,Max,CTCF	Name=6	NA	rs12483761	0.13	0.13	0.091	0.118411	0.1332	0.0278	0.2176	0.1551	0.0767	0.14	0.03	0.21	0.17	0.1241	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.974425	NA	0	0.131901	0.140408	NA	0.181	NA	7.2774656
924	11	6412931	6412931	T	C	exonic	SMPD1	NA	synonymous SNV	SMPD1:NM_000543:exon2:c.T636C:p.D212D,SMPD1:NM_001007593:exon2:c.T633C:p.D211D	exonic	ENSG00000166311	NA	synonymous SNV	ENSG00000166311:ENST00000299397:exon2:c.T636C:p.D212D,ENSG00000166311:ENST00000342245:exon2:c.T636C:p.D212D,ENSG00000166311:ENST00000356761:exon2:c.T636C:p.D212D,ENSG00000166311:ENST00000527275:exon2:c.T633C:p.D211D,ENSG00000166311:ENST00000533123:exon2:c.T636C:p.D212D,ENSG00000166311:ENST00000534405:exon2:c.T636C:p.D212D	Score=561;Name=lod=255	NA	11p15.4	NA	NA	NA	NA	rs7951904	0.11	0.11	0.084	0.128195	0.1243	0.004	0.0994	0.2118	0.1677	0.11	0.0035	0.11	0.22	0.131	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.089748	NA	NA	0.134606	0.183864	NA	0.138	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000079197.1;CLNDSDB=.;CLNDSDBID=.	7.2767606
924	11	101323770	101323770	C	T	exonic	TRPC6	NA	synonymous SNV	TRPC6:NM_004621:exon13:c.G2712A:p.Q904Q	exonic	ENSG00000137672	NA	synonymous SNV	ENSG00000137672:ENST00000348423:exon11:c.G2364A:p.Q788Q,ENSG00000137672:ENST00000360497:exon12:c.G2547A:p.Q849Q,ENSG00000137672:ENST00000532133:exon12:c.G2478A:p.Q826Q,ENSG00000137672:ENST00000344327:exon13:c.G2712A:p.Q904Q	Score=661;Name=lod=648	NA	11q22.1	Score=810;Name=V$GFI1_01	NA	NA	NA	rs12805398	0.09	0.09	0.089	0.0748802	0.1501	0.0724	0.0677	0.0068	0.0971	0.16	0.08	0.07	0.01	0.1073	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.1808	NA	NA	0.132791	0.027009	NA	0.058	NA	7.2764756
924	1	228509427	228509427	A	G	exonic	OBSCN	NA	nonsynonymous SNV	OBSCN:NM_001098623:exon55:c.A14885G:p.D4962G,OBSCN:NM_052843:exon55:c.A14885G:p.D4962G,OBSCN:NM_001271223:exon66:c.A17756G:p.D5919G	exonic	ENSG00000154358	NA	nonsynonymous SNV	ENSG00000154358:ENST00000284548:exon55:c.A14885G:p.D4962G,ENSG00000154358:ENST00000366709:exon55:c.A6242G:p.D2081G,ENSG00000154358:ENST00000422127:exon55:c.A14885G:p.D4962G,ENSG00000154358:ENST00000366707:exon61:c.A7787G:p.D2596G,ENSG00000154358:ENST00000570156:exon66:c.A17756G:p.D5919G	NA	NA	1q42.13	Score=821;Name=V$AP4_01	NA	NA	NA	rs373610	0.71	0.71	0.699	0.684704	0.674	0.7044	0.6758	0.8684	0.4335	0.67	0.68	0.68	0.85	0.6862	0.85	0.42	T	0.0	B	0.0	B	0.125	N	1.000	P	0.08	N	-0.27	T	-1.006	T	0.000	T	0.073	1.125	9.585	1.91	0.244	2.094	4.77	1.124627	NA	0.38	0.696789	0.824399	NA	0.652	NA	7.2763444
924	1	2430617	2430617	C	T	exonic	PLCH2	NA	synonymous SNV	PLCH2:NM_014638:exon19:c.C2529T:p.I843I	exonic	ENSG00000149527	NA	synonymous SNV	ENSG00000149527:ENST00000288766:exon5:c.C393T:p.I131I,ENSG00000149527:ENST00000378488:exon18:c.C2421T:p.I807I,ENSG00000149527:ENST00000378486:exon19:c.C2529T:p.I843I,ENSG00000149527:ENST00000419816:exon19:c.C2529T:p.I843I,ENSG00000149527:ENST00000449969:exon19:c.C2448T:p.I816I	Score=534;Name=lod=198	NA	1p36.32	NA	NA	NA	NA	rs2296442	0.44	0.44	0.414	0.366613	0.4821	0.4812	0.4481	0.1725	0.3344	0.49	0.55	0.46	0.2	0.4352	0.55	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.928	T	0.000	T	.	0.119	4.641	-1.71	-0.659	-1.564	11.363	0.119174	NA	NA	0.473678	0.215207	NA	0.275	NA	7.2756886
924	19	48248834	48248834	T	C	exonic	GLTSCR2	NA	synonymous SNV	GLTSCR2:NM_015710:exon1:c.T18C:p.S6S	exonic	ENSG00000105373	NA	synonymous SNV	ENSG00000105373:ENST00000246802:exon1:c.T18C:p.S6S	NA	NA	19q13.33	NA	Name=ZNF263,Pol2-4H8,YY1,Pol2(b),TBP,IRF1,THAP1_(SC-98174),GTF2B,USF-1,Nrf1,CCNT2,c-Myc,HEY1,NFKB,YY1_(C-20),TAF7_(SQ-8),eGFP-JunD,Pol2,SP1,Pol2(phosphoS2),POU2F2,GABP,HMGN3,TAF1,ETS1,SP2_(SC-643),GTF2F1_(RAP-74),Oct-2,Max,STAT1,ELF1_(SC-631)	Name=148	NA	rs10404034	0.06	0.06	0.049	0.0601038	0.1382	0.0089	0.062	0.0091	0.1002	0.14	0.01	0.06	0.02	0.11	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.715938	NA	NA	0.143023	0.038811	NA	0.123	NA	7.2754436
924	19	45396144	45396144	C	T	exonic	TOMM40	NA	synonymous SNV	TOMM40:NM_001128917:exon3:c.C393T:p.F131F,TOMM40:NM_001128916:exon4:c.C393T:p.F131F,TOMM40:NM_006114:exon4:c.C393T:p.F131F	exonic	ENSG00000130204	NA	synonymous SNV	ENSG00000130204:ENST00000426677:exon3:c.C393T:p.F131F,ENSG00000130204:ENST00000252487:exon4:c.C393T:p.F131F,ENSG00000130204:ENST00000405636:exon4:c.C393T:p.F131F,ENSG00000130204:ENST00000589649:exon4:c.C393T:p.F131F,ENSG00000130204:ENST00000592434:exon4:c.C393T:p.F131F	Score=490;Name=lod=131	NA	19q13.32	NA	Name=Pol2	NA	NA	rs11556505	0.13	0.13	0.113	0.114018	0.1312	0.0962	0.1052	0.1112	0.1247	0.13	0.11	0.14	0.14	0.1286	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.476696	1.476696	NA	0.13186	0.117113	NA	0.101	NA	7.2750066
925	3	170214282	170214282	G	A	intronic	SLC7A14	NA	NA	NA	ncRNA_exonic	ENSG00000241416	NA	NA	NA	Score=646;Name=lod=565	NA	3q26.2	NA	Name=CTCF_(SC-5916),CTCF,Rad21	Name=3	NA	rs16834205	0.08	0.08	0.083	0.0758786	0.0596	0.1379	0.1081	0.0189	0.0828	0.06	0.17	0.08	0.02	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.988744	NA	NA	NA	NA	NA	0.138	NA	7.2737333
925	6	123869607	123869607	G	C	exonic	TRDN	NA	nonsynonymous SNV	TRDN:NM_001251987:exon3:c.C383G:p.T128S,TRDN:NM_001256020:exon3:c.C383G:p.T128S,TRDN:NM_001256021:exon3:c.C383G:p.T128S,TRDN:NM_001256022:exon3:c.C383G:p.T128S,TRDN:NM_006073:exon3:c.C383G:p.T128S	exonic	ENSG00000186439	NA	nonsynonymous SNV	ENSG00000186439:ENST00000334268:exon3:c.C383G:p.T128S,ENSG00000186439:ENST00000398178:exon3:c.C383G:p.T128S,ENSG00000186439:ENST00000542443:exon3:c.C383G:p.T128S,ENSG00000186439:ENST00000546248:exon3:c.C383G:p.T128S	Score=369;Name=lod=42	NA	6q22.31	NA	NA	NA	NA	rs9490809	0.38	0.38	0.404	0.392971	0.5298	0.0813	0.3372	0.5363	0.4192	0.52	0.08	0.38	0.52	0.4926	0.55	0.62	T	0.874	P	0.443	B	0.362	N	1.000	P	1.78	L	0.58	T	-1.071	T	0.096	T	0.084	-1.142	0.108	1.97	0.376	-0.006	4.223	-1.141849	NA	0.26	0.53747	0.549468	NA	0.406	NA	7.2734634
925	1	210334081	210334081	T	C	exonic	SYT14	NA	synonymous SNV	SYT14:NM_153262:exon8:c.T1362C:p.Y454Y,SYT14:NM_001146262:exon9:c.T1419C:p.Y473Y,SYT14:NM_001146264:exon9:c.T1497C:p.Y499Y,SYT14:NM_001256006:exon9:c.T1248C:p.Y416Y,SYT14:NM_001146261:exon10:c.T1554C:p.Y518Y	exonic	ENSG00000143469	NA	synonymous SNV	ENSG00000143469:ENST00000367015:exon8:c.T1248C:p.Y416Y,ENSG00000143469:ENST00000472886:exon8:c.T1362C:p.Y454Y,ENSG00000143469:ENST00000367019:exon9:c.T1419C:p.Y473Y,ENSG00000143469:ENST00000534859:exon9:c.T1440C:p.Y480Y,ENSG00000143469:ENST00000537238:exon9:c.T1248C:p.Y416Y,ENSG00000143469:ENST00000422431:exon10:c.T1554C:p.Y518Y	Score=510;Name=lod=158	NA	1q32.2	NA	NA	NA	NA	rs17188183	0.08	0.08	0.06	0.0752796	0.1402	0.0486	0.0677	0.0121	0.1268	0.14	0.06	0.09	0.02	0.1183	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.292188	NA	NA	0.13593	0.026555	NA	0.138	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118573.2;CLNDSDB=.;CLNDSDBID=.	7.2722366
925	1	9011586	9011586	T	G	intronic	CA6	NA	NA	NA	exonic	ENSG00000131686	NA	nonsynonymous SNV	ENSG00000131686:ENST00000319474:exon3:c.T364G:p.W122G,ENSG00000131686:ENST00000480186:exon3:c.T364G:p.W122G	NA	NA	1p36.23	NA	NA	Name=3	NA	rs3765968	0.66	0.66	0.65	0.650359	0.6352	0.7014	0.5533	0.7133	0.5971	0.61	0.72	0.6	0.73	0.6239	0.73	1	T	.	.	.	.	.	.	1.000	P	.	.	1.32	T	-0.917	T	0.000	T	0.085	-2.721	0	-1.95	-4.013	-3.701	1.188	-2.721198	NA	0.57	0.63561	0.71347	NA	0.514	NA	7.2719567
925	16	56660841	56660841	C	T	exonic	MT1E	NA	synonymous SNV	MT1E:NM_175617:exon3:c.C144T:p.C48C	exonic	ENSG00000169715	NA	synonymous SNV	ENSG00000169715:ENST00000568293:exon2:c.C78T:p.C26C,ENSG00000169715:ENST00000306061:exon3:c.C144T:p.C48C	Score=532;Name=lod=194	NA	16q12.2	NA	Name=Pol2	NA	NA	rs72818418	0.1	0.1	0.093	0.111222	0.1262	0.0139	0.1124	0.1346	0.1636	0.13	0.0035	0.1	0.14	0.1347	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.917737	NA	NA	0.134186	0.134895	NA	0.181	NA	7.2715806
925	19	34584137	34584137	A	G	intergenic	KCTD15,LSM14A	dist=277471;dist=79215	NA	NA	ncRNA_exonic	ENSG00000186008	NA	NA	NA	Score=809;Name=lod=2593	NA	19q13.11	NA	NA	NA	NA	rs574004	0.33	0.33	0.303	0.33127	0.3519	0.2966	0.2795	0.3752	0.3231	0.33	0.29	0.31	0.38	0.3768	0.38	0	D	0.026	B	0.022	B	0.000	U	0.001	P	.	.	.	.	-0.976	T	0.000	T	0.606	2.042	12.79	0.505	0.428	2.866	5.262	2.04229	2.04229	0	NA	NA	NA	0.348	NA	7.2713
925	5	178507090	178507090	G	A	exonic	ZNF354C	NA	nonsynonymous SNV	ZNF354C:NM_014594:exon5:c.G1657A:p.E553K	exonic	ENSG00000177932	NA	nonsynonymous SNV	ENSG00000177932:ENST00000315475:exon5:c.G1657A:p.E553K	NA	NA	5q35.3	NA	NA	NA	NA	rs1445845	0.76	0.76	0.768	0.775958	0.666	0.8879	0.7406	0.7368	0.8517	0.68	0.9	0.75	0.75	0.7194	0.9	0.79	T	0.001	B	0.002	B	.	.	1.000	P	-0.13	N	3.54	T	-1.022	T	0.000	T	0.137	2.462	14.19	2.62	1.043	0.403	9.140	2.462234	2.462234	0.32	0.676799	0.719579	NA	0.703	NA	7.2711344
925	8	95161102	95161102	G	A	exonic	CDH17	NA	synonymous SNV	CDH17:NM_001144663:exon14:c.C1797T:p.S599S,CDH17:NM_004063:exon14:c.C1797T:p.S599S	exonic	ENSG00000079112	NA	synonymous SNV	ENSG00000079112:ENST00000441892:exon10:c.C1155T:p.S385S,ENSG00000079112:ENST00000027335:exon14:c.C1797T:p.S599S,ENSG00000079112:ENST00000450165:exon14:c.C1797T:p.S599S	Score=329;Name=lod=29	NA	8q22.1	Score=833;Name=V$POU3F2_01	NA	NA	NA	rs35792427	0.13	0.13	0.11	0.126797	0.1143	0.1587	0.2305	0.0106	0.1902	0.12	0.15	0.24	0.02	0.1457	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.93494	NA	NA	0.135581	0.030413	NA	0.123	NA	7.2710856
925	2	224462310	224462310	G	A	exonic	SCG2	NA	nonsynonymous SNV	SCG2:NM_003469:exon2:c.C1691T:p.P564L	exonic	ENSG00000171951	NA	nonsynonymous SNV	ENSG00000171951:ENST00000305409:exon2:c.C1691T:p.P564L	NA	NA	2q36.1	NA	NA	NA	NA	rs36043001	0.01	0.01	0.01	0.0061901	0.0209	NA	0.0115	0.0008	0.001	0.02	NA	0.01	0.002	0.0152	0.026	0.13	T	0.001	B	0.001	B	0.910	N	1.000	N	-0.69	N	4.81	T	-0.911	T	0.001	T	0.039	0.475	6.578	0.4	0.004	0.394	4.706	0.474933	NA	0.18	0.026512	0.003177	NA	0.029	NA	7.2707214
925	8	41583294	41583294	C	T	exonic	ANK1	NA	synonymous SNV	ANK1:NM_000037:exon6:c.G597A:p.P199P,ANK1:NM_001142446:exon6:c.G696A:p.P232P,ANK1:NM_020475:exon6:c.G597A:p.P199P,ANK1:NM_020476:exon6:c.G597A:p.P199P,ANK1:NM_020477:exon6:c.G597A:p.P199P	exonic	ENSG00000029534	NA	synonymous SNV	ENSG00000029534:ENST00000265709:exon6:c.G696A:p.P232P,ENSG00000029534:ENST00000289734:exon6:c.G597A:p.P199P,ENSG00000029534:ENST00000347528:exon6:c.G597A:p.P199P,ENSG00000029534:ENST00000352337:exon6:c.G597A:p.P199P,ENSG00000029534:ENST00000379758:exon6:c.G597A:p.P199P,ENSG00000029534:ENST00000396942:exon6:c.G597A:p.P199P,ENSG00000029534:ENST00000396945:exon6:c.G597A:p.P199P	NA	NA	8p11.21	Score=903;Name=V$CP2_01	NA	Name=3	NA	rs2304873	0.11	0.11	0.104	0.105032	0.1213	0.1577	0.0893	0.0151	0.1667	0.11	0.17	0.12	0.02	0.1382	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.278498	1.278498	NA	0.136776	0.034303	NA	0.072	NA	7.2703906
925	15	59499228	59499228	C	T	exonic	LDHAL6B	NA	nonsynonymous SNV	LDHAL6B:NM_033195:exon1:c.C89T:p.P30L	exonic	ENSG00000171989	NA	nonsynonymous SNV	ENSG00000171989:ENST00000307144:exon1:c.C89T:p.P30L	NA	NA	15q22.2	NA	NA	NA	NA	rs3809529	0.45	0.45	0.432	0.491214	0.34	0.6131	0.4409	0.4735	0.5808	0.34	0.63	0.4	0.44	0.4019	0.63	0.27	T	0.014	B	0.002	B	0.658	U	0.003	P	0.895	L	-0.35	T	-0.915	T	0.000	T	0.168	0.657	7.523	1.49	0.710	1.945	6.800	0.657174	NA	0.31	0.321212	0.4288	NA	0.406	NA	7.2702214
925	15	51529112	51529112	T	C	exonic	CYP19A1	NA	synonymous SNV	CYP19A1:NM_000103:exon3:c.A240G:p.V80V,CYP19A1:NM_031226:exon4:c.A240G:p.V80V	exonic	ENSG00000137869	NA	synonymous SNV	ENSG00000137869:ENST00000405913:exon2:c.A240G:p.V80V,ENSG00000137869:ENST00000559878:exon2:c.A240G:p.V80V,ENSG00000137869:ENST00000260433:exon3:c.A240G:p.V80V,ENSG00000137869:ENST00000396402:exon3:c.A240G:p.V80V,ENSG00000137869:ENST00000557858:exon3:c.A240G:p.V80V,ENSG00000137869:ENST00000557934:exon3:c.A240G:p.V80V,ENSG00000137869:ENST00000558328:exon3:c.A240G:p.V80V,ENSG00000137869:ENST00000559646:exon3:c.A240G:p.V80V,ENSG00000137869:ENST00000561075:exon3:c.A240G:p.V80V,ENSG00000137869:ENST00000396404:exon4:c.A240G:p.V80V,ENSG00000137869:ENST00000405011:exon4:c.A240G:p.V80V,ENSG00000137869:ENST00000439712:exon4:c.A240G:p.V80V,ENSG00000137869:ENST00000453807:exon4:c.A240G:p.V80V,ENSG00000137869:ENST00000559980:exon5:c.A240G:p.V80V	Score=539;Name=lod=206	NA	15q21.2	Score=810;Name=V$CDPCR3_01	NA	Name=11	NA	rs700518	0.37	0.37	0.361	0.325879	0.4692	0.4385	0.3156	0.1619	0.2914	0.48	0.45	0.33	0.13	0.4253	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.056459	NA	NA	0.50198	0.214253	ID=COSM147905;OCCURENCE=1(stomach),1(prostate)	0.29	NA	7.2701866
925	12	121416622	121416622	C	G	exonic	HNF1A	NA	synonymous SNV	HNF1A:NM_000545:exon1:c.C51G:p.L17L	exonic	ENSG00000135100	NA	synonymous SNV	ENSG00000135100:ENST00000257555:exon1:c.C51G:p.L17L,ENSG00000135100:ENST00000400024:exon1:c.C51G:p.L17L,ENSG00000135100:ENST00000402929:exon1:c.C51G:p.L17L,ENSG00000135100:ENST00000538626:exon1:c.C51G:p.L17L,ENSG00000135100:ENST00000538646:exon1:c.C51G:p.L17L,ENSG00000135100:ENST00000540108:exon1:c.C51G:p.L17L,ENSG00000135100:ENST00000541395:exon1:c.C51G:p.L17L,ENSG00000135100:ENST00000541924:exon1:c.C51G:p.L17L,ENSG00000135100:ENST00000544413:exon1:c.C51G:p.L17L,ENSG00000135100:ENST00000544574:exon1:c.C51G:p.L17L	Score=536;Name=lod=202	NA	12q24.31	NA	Name=TAF1	NA	NA	rs1169289	0.41	0.41	0.414	0.428514	0.4692	0.3819	0.438	0.3169	0.5787	0.46	0.41	0.47	0.29	0.4722	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.771022	NA	NA	0.455869	0.342572	ID=COSM430521;OCCURENCE=1(breast)	0.29	CLINSIG=probable-non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000117231.2|RCV000125369.1;CLNDSDB=.|.;CLNDSDBID=.|.	7.2693976
925	3	194373832	194373832	T	C	exonic	LSG1	NA	nonsynonymous SNV	LSG1:NM_018385:exon8:c.A799G:p.K267E	exonic	ENSG00000041802	NA	nonsynonymous SNV	ENSG00000041802:ENST00000265245:exon8:c.A799G:p.K267E	NA	NA	3q29	NA	NA	NA	NA	rs1675953	0.56	0.56	0.616	0.634585	0.7038	0.8651	0.6297	0.3253	0.7474	0.61	0.76	0.57	0.26	0.677	0.76	1	T	0.0	B	0.0	B	0.619	N	1.000	P	-1.385	N	0.98	T	-0.952	T	0.000	T	0.051	-0.28	2.66	4.34	1.431	0.516	8.577	-0.280053	NA	1	0.683721	0.401725	NA	NA	NA	7.2688124
925	11	60291413	60291413	C	T	exonic	MS4A13	NA	nonsynonymous SNV	MS4A13:NM_001012417:exon4:c.C173T:p.P58L,MS4A13:NM_001100909:exon4:c.C173T:p.P58L	exonic	ENSG00000204979	NA	nonsynonymous SNV	ENSG00000204979:ENST00000378185:exon4:c.C173T:p.P58L,ENSG00000204979:ENST00000378186:exon4:c.C173T:p.P58L	NA	NA	11q12.2	NA	NA	NA	NA	rs6591595	0.74	0.74	0.747	0.728834	0.8787	0.7242	0.6859	0.6059	0.7761	0.88	0.72	0.7	0.6	0.8185	0.88	0.02	D	0.962	D	0.579	P	0.713	N	1.000	P	1.79	L	4.19	T	-0.976	T	0.000	T	0.116	2.028	12.74	1.32	0.316	-0.211	6.865	2.027638	2.027638	0.06	0.867397	0.640781	NA	0.775	NA	7.2687364
925	13	101833450	101833450	C	T	intronic	NALCN	NA	NA	NA	exonic	ENSG00000102452	NA	nonsynonymous SNV	ENSG00000102452:ENST00000376196:exon15:c.G2003A:p.R668Q	NA	NA	13q33.1	NA	NA	NA	NA	rs896560	0.17	0.17	0.17	0.186502	0.3101	0.0327	0.1873	0.1165	0.3119	0.29	0.02	0.2	0.15	0.2594	0.33	0	D	0.0	B	0.0	B	.	.	1.000	P	.	.	-5.03	D	-0.937	T	0.000	T	0.101	-0.532	1.58	-1.47	-0.659	-0.078	3.921	-0.531799	NA	0	0.328729	0.142694	NA	0.297	NA	7.2684377
925	1	120057002	120057002	T	C	exonic	HSD3B1	NA	nonsynonymous SNV	HSD3B1:NM_000862:exon4:c.T856C:p.F286L	exonic	ENSG00000203857	NA	nonsynonymous SNV	ENSG00000203857:ENST00000528909:exon3:c.T856C:p.F286L,ENSG00000203857:ENST00000235547:exon4:c.T862C:p.F288L,ENSG00000203857:ENST00000369413:exon4:c.T856C:p.F286L	NA	NA	1p12	NA	NA	NA	NA	rs6205	0.13	0.13	0.119	0.157748	0.007	0.0595	0.0793	0.4546	0.0685	0.0013	0.05	0.07	0.45	0.0543	0.45	1	T	0.0	B	0.001	B	0.864	N	1.000	P	-2.84	N	0.31	T	-0.986	T	0.007	T	0.028	-2.776	0	-0.227	-0.080	-0.805	3.953	-2.776107	NA	1	0.003837	0.381525	NA	0.116	NA	7.2681964
925	20	60943762	60943762	G	A	intergenic	LAMA5,RPS21	dist=1394;dist=18359	NA	NA	intergenic	ENSG00000130702,ENSG00000171858	dist=1394;dist=18410	NA	NA	Score=265;Name=lod=16	NA	20q13.33	Score=920;Name=V$SP1_Q6	Name=ZBTB7A_(SC-34508),HEY1,TBP,HNF4A_(H-171),FOSL2,Sin3Ak-20,HDAC2_(SC-6296),Egr-1,HNF4G_(SC-6558),CHD2_(N-1250),p300,Pol2,TCF4,HNF4A	Name=39	NA	rs75024142	0.05	0.05	0.043	0.0754792	0.0656	0.0089	0.0533	0.0658	0.183	0.07	0.0035	0.06	0.08	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.152921	NA	NA	NA	NA	NA	0.116	NA	7.2677334
925	10	105927460	105927460	C	T	exonic	WDR96	NA	synonymous SNV	WDR96:NM_025145:exon22:c.G2727A:p.P909P	exonic	ENSG00000197748	NA	synonymous SNV	ENSG00000197748:ENST00000278064:exon22:c.G2520A:p.P840P,ENSG00000197748:ENST00000357060:exon22:c.G2727A:p.P909P,ENSG00000197748:ENST00000428666:exon22:c.G2730A:p.P910P	Score=472;Name=lod=111	NA	10q25.1	NA	NA	NA	NA	rs17750886	0.08	0.08	0.083	0.0700879	0.164	0.001	0.085	0.0325	0.0849	0.17	0.0017	0.1	0.03	0.1048	0.17	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.025	T	0.000	T	.	0.201	5.085	-1.34	-0.417	-0.595	6.066	0.201277	NA	NA	0.130233	0.046074	NA	0.022	NA	7.2676336
925	16	1877698	1877698	C	G	exonic	FAHD1	NA	synonymous SNV	FAHD1:NM_001018104:exon1:c.C468G:p.L156L,FAHD1:NM_001142398:exon1:c.C468G:p.L156L,FAHD1:NM_031208:exon1:c.C468G:p.L156L	exonic	ENSG00000180185	NA	synonymous SNV	ENSG00000180185:ENST00000382666:exon1:c.C468G:p.L156L,ENSG00000180185:ENST00000382668:exon1:c.C468G:p.L156L,ENSG00000180185:ENST00000427358:exon1:c.C468G:p.L156L	Score=405;Name=lod=59	NA	16p13.3	NA	NA	Name=4	NA	rs3743852	0.12	0.12	0.111	0.117412	0.1342	0.1042	0.0908	0.1006	0.1554	0.13	0.12	0.11	0.11	0.1294	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.355737	NA	NA	0.136279	0.10141	ID=COSM1376209;OCCURENCE=1(large_intestine)	0.138	NA	7.2667876
925	17	36704829	36704829	G	A	exonic	SRCIN1	NA	synonymous SNV	SRCIN1:NM_025248:exon17:c.C3234T:p.D1078D	exonic	ENSG00000017373	NA	synonymous SNV	ENSG00000017373:ENST00000264659:exon17:c.C3234T:p.D1078D,ENSG00000017373:ENST00000578925:exon18:c.C3336T:p.D1112D	Score=415;Name=lod=65	NA	17q12	Score=815;Name=V$YY1_02	NA	NA	NA	rs56321748	0.11	0.11	0.104	0.108027	0.1402	0.1429	0.062	0.0477	0.1534	0.14	0.15	0.08	0.05	0.1284	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.332714	1.332714	NA	0.131473	0.055133	NA	0.065	NA	7.2665936
926	1	228505668	228505668	C	G	exonic	OBSCN	NA	nonsynonymous SNV	OBSCN:NM_001098623:exon53:c.C13925G:p.S4642C,OBSCN:NM_052843:exon53:c.C13925G:p.S4642C,OBSCN:NM_001271223:exon64:c.C16796G:p.S5599C	exonic	ENSG00000154358	NA	nonsynonymous SNV	ENSG00000154358:ENST00000284548:exon53:c.C13925G:p.S4642C,ENSG00000154358:ENST00000366709:exon53:c.C5282G:p.S1761C,ENSG00000154358:ENST00000422127:exon53:c.C13925G:p.S4642C,ENSG00000154358:ENST00000366707:exon59:c.C6827G:p.S2276C,ENSG00000154358:ENST00000570156:exon64:c.C16796G:p.S5599C	NA	NA	1q42.13	NA	NA	NA	NA	rs1188729	0.73	0.73	0.707	0.699281	0.674	0.748	0.7147	0.8661	0.4387	0.67	0.74	0.72	0.84	0.694	0.84	0.11	T	0.0	B	0.0	B	0.205	N	1.000	P	0.165	N	-1.09	T	-0.986	T	0.000	T	0.11	1.214	9.929	2.58	0.559	2.591	7.934	1.214304	NA	0.04	0.701563	0.832546	NA	0.674	NA	7.2637704
926	19	45179567	45179567	C	T	exonic	CEACAM19	NA	nonsynonymous SNV	CEACAM19:NM_001127893:exon3:c.C449T:p.T150I,CEACAM19:NM_020219:exon3:c.C449T:p.T150I	exonic	ENSG00000186567	NA	nonsynonymous SNV	ENSG00000186567:ENST00000358777:exon3:c.C449T:p.T150I,ENSG00000186567:ENST00000403660:exon3:c.C449T:p.T150I	NA	NA	19q13.31	NA	NA	NA	NA	rs78626419	0.05	0.05	0.044	0.0465256	0.0199	NA	0.0202	0.1256	0.0337	0.02	NA	0.03	0.15	0.0294	0.15	0.2	T	0.004	B	0.003	B	.	.	1.000	N	0.46	N	4.29	T	-0.894	T	0.000	T	0.052	1.763	11.85	-0.264	-0.054	-0.014	3.661	1.762577	1.762577	0.07	0.020349	0.110985	NA	0.014	NA	7.2636844
926	13	50050620	50050620	A	G	exonic	SETDB2	NA	nonsynonymous SNV	SETDB2:NM_001160308:exon5:c.A314G:p.E105G,SETDB2:NM_031915:exon7:c.A350G:p.E117G	exonic	ENSG00000136169	NA	nonsynonymous SNV	ENSG00000136169:ENST00000258672:exon6:c.A314G:p.E105G,ENSG00000136169:ENST00000354234:exon6:c.A314G:p.E105G,ENSG00000136169:ENST00000317257:exon7:c.A350G:p.E117G	NA	NA	13q14.2	NA	NA	NA	NA	rs7998427	0.75	0.75	0.741	0.727236	0.673	0.8046	0.7507	0.7874	0.6053	0.68	0.81	0.75	0.77	0.7096	0.81	0.5	T	0.013	B	0.019	B	0.553	N	1.000	P	1.04	L	1.14	T	-0.931	T	0.000	T	0.075	-0.415	2.062	3.52	0.499	3.304	8.591	-0.41517	NA	0.16	0.687369	0.777753	NA	0.652	NA	7.2633644
926	1	154987526	154987526	C	T	exonic	ZBTB7B	NA	synonymous SNV	ZBTB7B:NM_001256455:exon2:c.C390T:p.I130I,ZBTB7B:NM_001252406:exon4:c.C492T:p.I164I	exonic	ENSG00000160685	NA	synonymous SNV	ENSG00000160685:ENST00000292176:exon1:c.C390T:p.I130I,ENSG00000160685:ENST00000368426:exon3:c.C390T:p.I130I,ENSG00000160685:ENST00000417934:exon4:c.C492T:p.I164I,ENSG00000160685:ENST00000535420:exon4:c.C390T:p.I130I	Score=538;Name=lod=205	NA	1q21.3	Score=935;Name=V$NFKAPPAB65_01	NA	Name=3	NA	rs11264295	0.6	0.6	0.55	0.617812	0.4513	0.9058	0.6671	0.4592	0.6718	0.44	0.92	0.62	0.44	0.5275	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.931659	NA	NA	0.424535	0.470949	ID=COSM424019;OCCURENCE=1(breast)	0.428	NA	7.2633316
926	11	5602605	5602605	G	A	exonic	OR52B6	NA	nonsynonymous SNV	OR52B6:NM_001005162:exon1:c.G499A:p.A167T	exonic	ENSG00000187747	NA	nonsynonymous SNV	ENSG00000187747:ENST00000345043:exon1:c.G499A:p.A167T	NA	NA	11p15.4	NA	Name=CEBPB	NA	NA	rs2341433	0.54	0.54	0.537	0.565296	0.331	0.7659	0.562	0.6142	0.5358	0.34	0.76	0.53	0.61	0.427	0.76	0.73	T	0.013	B	0.022	B	0.120	N	1.000	P	0.76	N	1.19	T	-0.984	T	0.000	T	0.025	-0.118	3.422	1.57	0.101	-0.549	8.494	-0.117846	NA	0.3	0.313547	0.547024	NA	0.384	NA	7.2617864
926	7	123388732	123388732	G	A	exonic	WASL	NA	synonymous SNV	WASL:NM_003941:exon1:c.C57T:p.S19S	exonic	ENSG00000106299	NA	synonymous SNV	ENSG00000106299:ENST00000223023:exon1:c.C57T:p.S19S	Score=651;Name=lod=592	NA	7q31.32	Score=753;Name=V$HEN1_02	Name=Egr-1	NA	NA	rs1054706	0.44	0.44	0.435	0.477236	0.4384	0.5565	0.428	0.2973	0.7137	0.43	0.58	0.48	0.28	0.4971	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.51471	1.51471	NA	0.469419	0.33409	NA	0.152	NA	7.2617476
926	5	157065306	157065306	G	A	exonic	SOX30	NA	synonymous SNV	SOX30:NM_178424:exon4:c.C1812T:p.F604F	exonic	ENSG00000039600	NA	synonymous SNV	ENSG00000039600:ENST00000265007:exon4:c.C1812T:p.F604F,ENSG00000039600:ENST00000519442:exon5:c.C897T:p.F299F	Score=569;Name=lod=273	NA	5q33.3	Score=949;Name=V$IK2_01	NA	NA	NA	rs35793864	0.1	0.1	0.08	0.096845	0.1362	0.123	0.0778	0.0053	0.1667	0.13	0.13	0.08	0.02	0.1266	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.137162	NA	NA	0.143721	0.026101	NA	0.072	NA	7.2601456
926	3	187088923	187088923	G	A	exonic	RTP4	NA	nonsynonymous SNV	RTP4:NM_022147:exon2:c.G503A:p.S168N	exonic	ENSG00000136514	NA	nonsynonymous SNV	ENSG00000136514:ENST00000259030:exon2:c.G503A:p.S168N	NA	NA	3q27.3	NA	NA	NA	NA	rs35224605	0.01	0.01	0.008	0.0113818	0.0209	NA	0.0274	0.0023	0.0143	0.02	NA	0.03	0.0041	0.0234	0.03	0.56	T	0.008	B	0.001	B	0.000	N	1.000	N	-0.55	N	2.23	T	-1.020	T	0.006	T	0.006	-0.595	1.338	-0.231	-0.045	-0.848	2.700	-0.594773	NA	0.72	0.029186	0.005447	NA	0.014	NA	7.2598474
926	6	131995313	131995313	A	G	exonic	ENPP3	NA	synonymous SNV	ENPP3:NM_005021:exon8:c.A654G:p.P218P	exonic	ENSG00000154269	NA	synonymous SNV	ENSG00000154269:ENST00000357639:exon8:c.A654G:p.P218P,ENSG00000154269:ENST00000358229:exon8:c.A654G:p.P218P,ENSG00000154269:ENST00000414305:exon9:c.A654G:p.P218P,ENSG00000154269:ENST00000427148:exon9:c.A552G:p.P184P,ENSG00000154269:ENST00000543135:exon9:c.A552G:p.P184P	Score=561;Name=lod=253	NA	6q23.2	Score=774;Name=V$HTF_01	NA	NA	NA	rs9493048	0.28	0.28	0.299	0.307308	0.1024	0.3254	0.2349	0.5401	0.2362	0.09	0.36	0.19	0.56	0.1966	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.221594	NA	NA	0.109419	0.455969	NA	0.399	NA	7.2582476
926	4	47593283	47593283	G	C	exonic	ATP10D	NA	nonsynonymous SNV	ATP10D:NM_020453:exon23:c.G4166C:p.S1389T	exonic	ENSG00000145246	NA	nonsynonymous SNV	ENSG00000145246:ENST00000273859:exon23:c.G4166C:p.S1389T	NA	NA	4p12	NA	NA	NA	NA	rs4145944	0.41	0.41	0.398	0.376997	0.3638	0.123	0.4006	0.6899	0.2127	0.38	0.15	0.44	0.72	0.3618	0.72	0.67	T	0.0	B	0.0	B	0.266	N	1.000	P	-1.01	N	1.18	T	-0.958	T	0.000	T	0.065	-0.935	0.369	3.59	0.480	0.929	6.374	-0.935039	NA	1	0.349884	0.614616	NA	0.478	NA	7.2578494
926	3	52864635	52864635	A	G	exonic	ITIH4	NA	synonymous SNV	ITIH4:NM_001166449:exon1:c.T24C:p.R8R,ITIH4:NM_002218:exon1:c.T24C:p.R8R	exonic	ENSG00000055955	NA	synonymous SNV	ENSG00000055955:ENST00000266041:exon1:c.T24C:p.R8R,ENSG00000055955:ENST00000346281:exon1:c.T24C:p.R8R,ENSG00000055955:ENST00000406595:exon1:c.T24C:p.R8R,ENSG00000055955:ENST00000485816:exon1:c.T24C:p.R8R	NA	NA	3p21.1	NA	Name=Pol2	Name=16	NA	rs2276818	0.11	0.11	0.093	0.0834665	0.1441	0.0417	0.1297	0.0613	0.0613	0.15	0.04	0.17	0.07	0.1171	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.119398	NA	NA	0.147791	0.077848	NA	0.145	NA	7.2576756
926	5	132159134	132159134	C	T	exonic	SHROOM1	NA	synonymous SNV	SHROOM1:NM_133456:exon6:c.G2034A:p.A678A,SHROOM1:NM_001172700:exon9:c.G2034A:p.A678A	exonic	ENSG00000164403	NA	synonymous SNV	ENSG00000164403:ENST00000378676:exon5:c.G1827A:p.A609A,ENSG00000164403:ENST00000319854:exon6:c.G2034A:p.A678A,ENSG00000164403:ENST00000378679:exon9:c.G2034A:p.A678A	NA	NA	5q31.1	NA	Name=YY1_(C-20),Max	Name=51	NA	rs4705870	0.1	0.1	0.072	0.111222	0.1262	0.1171	0.085	0.053	0.1871	0.13	0.12	0.09	0.06	0.1431	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.050328	NA	NA	0.140873	0.05814	NA	0.145	NA	7.2564936
926	14	74759006	74759006	C	T	exonic	ABCD4	NA	nonsynonymous SNV	ABCD4:NM_005050:exon11:c.G1102A:p.E368K	exonic	ENSG00000119688	NA	nonsynonymous SNV	ENSG00000119688:ENST00000298816:exon9:c.G790A:p.E264K,ENSG00000119688:ENST00000356924:exon11:c.G1102A:p.E368K	NA	NA	14q24.3	NA	NA	NA	NA	rs3742801	0.27	0.27	0.275	0.270367	0.3857	0.247	0.2723	0.1475	0.3405	0.37	0.24	0.29	0.13	0.3276	0.37	0.77	T	0.011	B	0.006	B	0.116	N	1.000	P	0	N	-3.14	D	-1.079	T	0.000	T	0.423	2.211	13.35	1.48	0.337	0.007	5.287	2.210747	2.210747	0.28	0.363721	0.197004	NA	0.275	NA	7.2563124
927	9	123850770	123850770	G	A	exonic	CNTRL	NA	nonsynonymous SNV	CNTRL:NM_007018:exon1:c.G166A:p.V56I	exonic	ENSG00000119397	NA	nonsynonymous SNV	ENSG00000119397:ENST00000238341:exon1:c.G166A:p.V56I,ENSG00000119397:ENST00000373865:exon2:c.G166A:p.V56I,ENSG00000119397:ENST00000373855:exon3:c.G166A:p.V56I	NA	NA	9q33.2	NA	NA	NA	NA	rs10818503	0.64	0.64	0.595	0.639577	0.6958	0.7788	0.7421	0.2557	0.8845	0.7	0.8	0.75	0.27	0.6933	0.8	0.21	T	0.001	B	0.001	B	.	.	1.000	P	1.03	L	1.8	T	-1.016	T	0.000	T	0.048	1.676	11.56	2.62	1.360	0.766	4.302	1.676337	1.676337	0.19	0.689535	0.335679	NA	0.551	NA	7.2546984
927	3	108639384	108639384	T	C	exonic	GUCA1C	NA	nonsynonymous SNV	GUCA1C:NM_005459:exon2:c.A253G:p.M85V	exonic	ENSG00000138472	NA	nonsynonymous SNV	ENSG00000138472:ENST00000261047:exon2:c.A253G:p.M85V,ENSG00000138472:ENST00000393963:exon2:c.A253G:p.M85V,ENSG00000138472:ENST00000471108:exon2:c.A253G:p.M85V	NA	NA	3q13.13	NA	NA	NA	NA	rs6804162	0.34	0.34	0.347	0.337061	0.3807	0.25	0.2522	0.438	0.3057	0.4	0.25	0.26	0.42	0.3422	0.42	0.91	T	0.0	B	0.0	B	0.001	N	1.000	P	0.115	N	1.03	T	-0.931	T	0.000	T	0.011	0.378	6.052	3.1	0.598	-0.034	2.791	0.377909	NA	0.18	0.356212	0.41852	NA	0.304	NA	7.2542214
927	16	1812972	1812972	G	C	exonic	MAPK8IP3	NA	synonymous SNV	MAPK8IP3:NM_001040439:exon15:c.G1842C:p.S614S,MAPK8IP3:NM_015133:exon16:c.G1860C:p.S620S	exonic	ENSG00000138834	NA	synonymous SNV	ENSG00000138834:ENST00000356010:exon15:c.G1842C:p.S614S,ENSG00000138834:ENST00000250894:exon16:c.G1860C:p.S620S	Score=562;Name=lod=257	NA	16p13.3	NA	NA	Name=5	NA	rs2294616	0.19	0.19	0.145	0.150559	0.1441	0.2698	0.0965	0.0371	0.226	0.18	0.33	0.14	0.09	0.1425	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.181298	NA	NA	0.126441	0.0439	NA	0.101	NA	7.2536256
927	19	48229169	48229169	A	G	exonic	EHD2	NA	synonymous SNV	EHD2:NM_014601:exon4:c.A603G:p.S201S	exonic	ENSG00000024422	NA	synonymous SNV	ENSG00000024422:ENST00000538399:exon3:c.A195G:p.S65S,ENSG00000024422:ENST00000263277:exon4:c.A603G:p.S201S	NA	NA	19q13.33	Score=771;Name=V$PAX5_01	Name=Pol2	NA	NA	rs8111184	0.1	0.1	0.101	0.110024	0.1402	0.0139	0.0836	0.1899	0.089	0.14	0.01	0.08	0.17	0.128	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.972632	NA	NA	0.145349	0.198139	NA	0.174	NA	7.2531176
927	22	19969106	19969106	A	G	exonic	ARVCF	NA	nonsynonymous SNV	ARVCF:NM_001670:exon5:c.T524C:p.V175A	exonic	ENSG00000099889	NA	nonsynonymous SNV	ENSG00000099889:ENST00000344269:exon3:c.T335C:p.V112A,ENSG00000099889:ENST00000401994:exon3:c.T335C:p.V112A,ENSG00000099889:ENST00000406259:exon3:c.T524C:p.V175A,ENSG00000099889:ENST00000406522:exon3:c.T335C:p.V112A,ENSG00000099889:ENST00000263207:exon5:c.T524C:p.V175A	NA	NA	22q11.21	NA	NA	NA	NA	rs2240717	0.38	0.38	0.337	0.419529	0.3459	0.2302	0.366	0.5983	0.4867	0.35	0.23	0.36	0.58	0.3941	0.58	.	.	0.0	B	0.0	B	0.631	N	1.000	P	-0.69	N	1.63	T	-0.925	T	0.000	T	0.011	-0.415	2.063	0.002	-0.211	1.447	8.989	-0.414989	NA	0.35	0.340216	0.53305	NA	0.406	NA	7.2531174
927	12	10562089	10562089	A	C	exonic	KLRC4	NA	nonsynonymous SNV	KLRC4:NM_013431:exon1:c.T86G:p.I29S	exonic	ENSG00000183542,ENSG00000255819	NA	nonsynonymous SNV	ENSG00000183542:ENST00000309384:exon1:c.T86G:p.I29S	NA	NA	12p13.2	NA	Name=STAT1	Name=58	NA	rs1841958	0.73	0.73	0.712	0.737021	0.6789	0.7431	0.8012	0.6558	0.8548	0.68	0.79	0.77	0.72	0.7188	0.79	1	T	0.0	B	0.0	B	0.598	N	1.000	P	-2.71	N	3.62	T	-0.964	T	0.000	T	0.26	-1.952	0.007	-1.6	-0.540	-0.559	0.157	-1.951907	NA	1	0.683721	0.651384	NA	0.717	NA	7.2519124
927	11	89531780	89531780	G	C	exonic	TRIM49	NA	nonsynonymous SNV	TRIM49:NM_020358:exon8:c.C877G:p.H293D	exonic	ENSG00000168930	NA	nonsynonymous SNV	ENSG00000168930:ENST00000532501:exon6:c.C646G:p.H216D,ENSG00000168930:ENST00000329758:exon8:c.C877G:p.H293D	NA	NA	11q14.3	NA	NA	NA	NA	rs71240006	0.14	0.14	0.069	NA	NA	NA	NA	NA	NA	0.1	0.17	0.24	0.12	0.0815	0.24	.	.	0.01	B	0.009	B	.	.	1.000	P	1.245	L	0.17	T	-1.050	T	0.000	T	0.291	-0.682	1.031	0.539	0.568	-1.486	.	-0.681762	NA	0.2	NA	NA	NA	NA	NA	7.2518334
927	6	37450914	37450914	T	C	UTR3	CCDC167	NM_138493:c.*48A>G	NA	NA	UTR3	ENSG00000198937	ENST00000373408:c.*48A>G	NA	NA	NA	NA	6p21.2	NA	NA	NA	NA	rs10692	0.68	0.68	0.723	0.670927	0.7018	0.4563	0.683	0.8699	0.5828	0.69	0.47	0.71	0.89	0.6867	0.89	0.02	D	.	.	.	.	0.486	N	1.000	P	.	.	.	.	-0.987	T	0.046	T	0.078	-1.541	0.015	-2.21	-1.609	-1.492	6.726	-1.541284	NA	0	0.69314	0.832728	NA	0.739	NA	7.2516934
927	11	123600475	123600475	A	G	exonic	ZNF202	NA	nonsynonymous SNV	ZNF202:NM_003455:exon5:c.T461C:p.V154A	exonic	ENSG00000166261	NA	nonsynonymous SNV	ENSG00000166261:ENST00000529691:exon3:c.T461C:p.V154A,ENSG00000166261:ENST00000336139:exon4:c.T461C:p.V154A,ENSG00000166261:ENST00000530393:exon5:c.T461C:p.V154A	NA	NA	11q24.1	NA	NA	Name=16	NA	rs1144507	0.66	0.66	0.667	0.665335	0.7038	0.4812	0.6744	0.767	0.6718	0.69	0.51	0.73	0.75	0.6885	0.76	0.82	T	0.0	B	0.0	B	0.803	N	1.000	P	-0.695	N	3.48	T	-1.034	T	0.000	T	0.024	-0.706	0.954	2.24	0.242	0.449	3.444	-0.705563	NA	0.88	0.692254	0.760445	NA	0.565	NA	7.2487794
927	12	2721137	2721137	C	T	exonic	CACNA1C	NA	synonymous SNV	CACNA1C:NM_000719:exon29:c.C3786T:p.F1262F,CACNA1C:NM_001129829:exon29:c.C3786T:p.F1262F,CACNA1C:NM_001129830:exon29:c.C3786T:p.F1262F,CACNA1C:NM_001129831:exon29:c.C3786T:p.F1262F,CACNA1C:NM_001129833:exon29:c.C3786T:p.F1262F,CACNA1C:NM_001129834:exon29:c.C3786T:p.F1262F,CACNA1C:NM_001129835:exon29:c.C3786T:p.F1262F,CACNA1C:NM_001129836:exon29:c.C3786T:p.F1262F,CACNA1C:NM_001129837:exon29:c.C3786T:p.F1262F,CACNA1C:NM_001129838:exon29:c.C3786T:p.F1262F,CACNA1C:NM_001129839:exon29:c.C3786T:p.F1262F,CACNA1C:NM_001129840:exon29:c.C3786T:p.F1262F,CACNA1C:NM_001129841:exon29:c.C3786T:p.F1262F,CACNA1C:NM_001129842:exon29:c.C3786T:p.F1262F,CACNA1C:NM_001129843:exon29:c.C3786T:p.F1262F,CACNA1C:NM_001129844:exon29:c.C3777T:p.F1259F,CACNA1C:NM_001129846:exon29:c.C3786T:p.F1262F,CACNA1C:NM_001167623:exon29:c.C3786T:p.F1262F,CACNA1C:NM_001167624:exon29:c.C3786T:p.F1262F,CACNA1C:NM_001167625:exon29:c.C3786T:p.F1262F,CACNA1C:NM_001129827:exon30:c.C3846T:p.F1282F,CACNA1C:NM_001129832:exon30:c.C3846T:p.F1282F,CACNA1C:NM_199460:exon30:c.C3846T:p.F1282F	exonic	ENSG00000151067	NA	synonymous SNV	ENSG00000151067:ENST00000327702:exon29:c.C3786T:p.F1262F,ENSG00000151067:ENST00000344100:exon29:c.C3786T:p.F1262F,ENSG00000151067:ENST00000399591:exon29:c.C3786T:p.F1262F,ENSG00000151067:ENST00000399595:exon29:c.C3786T:p.F1262F,ENSG00000151067:ENST00000399597:exon29:c.C3786T:p.F1262F,ENSG00000151067:ENST00000399601:exon29:c.C3786T:p.F1262F,ENSG00000151067:ENST00000399603:exon29:c.C3786T:p.F1262F,ENSG00000151067:ENST00000399617:exon29:c.C3786T:p.F1262F,ENSG00000151067:ENST00000399621:exon29:c.C3786T:p.F1262F,ENSG00000151067:ENST00000399629:exon29:c.C3786T:p.F1262F,ENSG00000151067:ENST00000399634:exon29:c.C3786T:p.F1262F,ENSG00000151067:ENST00000399637:exon29:c.C3786T:p.F1262F,ENSG00000151067:ENST00000399638:exon29:c.C3786T:p.F1262F,ENSG00000151067:ENST00000399641:exon29:c.C3786T:p.F1262F,ENSG00000151067:ENST00000399644:exon29:c.C3786T:p.F1262F,ENSG00000151067:ENST00000399649:exon29:c.C3786T:p.F1262F,ENSG00000151067:ENST00000399655:exon29:c.C3786T:p.F1262F,ENSG00000151067:ENST00000402845:exon29:c.C3786T:p.F1262F,ENSG00000151067:ENST00000406454:exon29:c.C3786T:p.F1262F,ENSG00000151067:ENST00000480911:exon29:c.C3786T:p.F1262F,ENSG00000151067:ENST00000335762:exon30:c.C3861T:p.F1287F,ENSG00000151067:ENST00000347598:exon30:c.C3846T:p.F1282F,ENSG00000151067:ENST00000399606:exon30:c.C3846T:p.F1282F	Score=466;Name=lod=104	NA	12p13.33	NA	NA	NA	NA	rs216008	0.26	0.26	NA	0.259185	0.2087	0.3512	0.2262	0.2413	0.2638	0.21	0.38	0.2	0.26	0.2095	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.32728	1.32728	NA	NA	NA	NA	0.319	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000079289.1|RCV000124080.1;CLNDSDB=.|.;CLNDSDBID=.|.	7.2484666
927	2	121746956	121746956	G	T	exonic	GLI2	NA	nonsynonymous SNV	GLI2:NM_005270:exon13:c.G3466T:p.A1156S	exonic	ENSG00000074047	NA	nonsynonymous SNV	ENSG00000074047:ENST00000361492:exon13:c.G3466T:p.A1156S,ENSG00000074047:ENST00000452319:exon14:c.G3466T:p.A1156S	NA	NA	2q14.2	Score=788;Name=V$PAX5_01	NA	NA	NA	rs3738880	0.56	0.56	0.569	0.508986	0.7247	0.4722	0.5836	0.3578	0.4765	0.72	0.5	0.59	0.37	0.6296	0.73	.	.	0.242	B	0.058	B	0.609	N	1.000	P	1.23	L	2.53	T	-1.041	T	0.000	T	0.025	-0.412	2.076	0.039	-0.176	-0.368	6.810	-0.411771	NA	0.41	0.730652	0.413453	NA	0.609	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000081284.1;CLNDSDB=.;CLNDSDBID=.	7.2483814
927	19	19049194	19049194	G	A	exonic	HOMER3	NA	synonymous SNV	HOMER3:NM_001145724:exon3:c.C271T:p.L91L,HOMER3:NM_001145721:exon4:c.C271T:p.L91L,HOMER3:NM_001145722:exon4:c.C271T:p.L91L,HOMER3:NM_004838:exon4:c.C271T:p.L91L	exonic	ENSG00000051128	NA	synonymous SNV	ENSG00000051128:ENST00000221222:exon3:c.C271T:p.L91L,ENSG00000051128:ENST00000539827:exon3:c.C271T:p.L91L,ENSG00000051128:ENST00000594439:exon3:c.C271T:p.L91L,ENSG00000051128:ENST00000355887:exon4:c.C271T:p.L91L,ENSG00000051128:ENST00000392351:exon4:c.C271T:p.L91L,ENSG00000051128:ENST00000433218:exon4:c.C271T:p.L91L,ENSG00000051128:ENST00000542541:exon4:c.C271T:p.L91L,ENSG00000051128:ENST00000596482:exon4:c.C271T:p.L91L,ENSG00000051128:ENST00000600077:exon5:c.C271T:p.L91L	Score=383;Name=lod=48	NA	19p13.11	Score=786;Name=V$PPARG_03	NA	NA	NA	rs11540741	0.08	0.08	0.053	0.0660942	0.1451	0.0565	0.0951	0.0091	0.0511	0.14	0.04	0.12	0.01	0.1204	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.381201	NA	NA	0.15407	0.029959	NA	0.072	NA	7.2470966
927	3	156266774	156266774	C	T	exonic	SSR3	NA	synonymous SNV	SSR3:NM_007107:exon3:c.G279A:p.E93E	exonic	ENSG00000114850	NA	synonymous SNV	ENSG00000114850:ENST00000265044:exon3:c.G279A:p.E93E,ENSG00000114850:ENST00000463503:exon3:c.G123A:p.E41E,ENSG00000114850:ENST00000467789:exon3:c.G279A:p.E93E,ENSG00000114850:ENST00000476217:exon3:c.G279A:p.E93E,ENSG00000114850:ENST00000496050:exon3:c.G123A:p.E41E	Score=665;Name=lod=675	NA	3q25.31	NA	NA	Name=14	NA	rs9296	0.17	0.17	0.175	0.175319	0.1481	0.2312	0.1542	0.1543	0.1892	0.15	0.19	0.12	0.2	0.1486	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.047025	NA	NA	0.124186	0.136405	NA	0.094	NA	7.2457806
927	11	89531540	89531540	C	T	exonic	TRIM49	NA	nonsynonymous SNV	TRIM49:NM_020358:exon8:c.G1117A:p.G373R	exonic	ENSG00000168930	NA	nonsynonymous SNV	ENSG00000168930:ENST00000532501:exon6:c.G886A:p.G296R,ENSG00000168930:ENST00000329758:exon8:c.G1117A:p.G373R	NA	NA	11q14.3	NA	NA	NA	NA	rs12417980	0.29	0.29	0.261	0.273962	0.3827	0.3958	0.33	0.087	0.2495	0.34	0.39	0.28	0.09	0.3236	0.39	.	.	0.834	P	0.703	P	.	.	1.000	P	0.465	N	-0.29	T	-1.045	T	0.000	T	0.058	0.934	8.805	-1.8	-0.534	-0.015	1.806	0.933832	NA	0.01	0.381894	0.162769	ID=COSM147302;OCCURENCE=1(stomach)	0.254	NA	7.2451394
928	2	206911228	206911228	G	A	exonic	INO80D	NA	nonsynonymous SNV	INO80D:NM_017759:exon5:c.C1073T:p.A358V	exonic	ENSG00000114933	NA	nonsynonymous SNV	ENSG00000114933:ENST00000424117:exon4:c.C758T:p.A253V,ENSG00000114933:ENST00000403263:exon5:c.C1073T:p.A358V	Score=537;Name=lod=203	NA	2q33.3	NA	NA	NA	NA	rs2909111	0.37	0.37	0.387	0.390375	0.3439	0.4792	0.3242	0.236	0.6022	0.34	0.51	0.34	0.28	0.3865	0.51	.	.	0.001	B	0.0	B	0.187	N	0.998	P	0	N	0.97	T	-0.916	T	0.000	T	0.034	2.316	13.7	-1.7	-0.190	-0.045	4.983	2.316205	2.316205	0.13	0.358852	0.23114	NA	0.5	NA	7.2440814
928	12	29648275	29648275	G	A	exonic	OVCH1	NA	nonsynonymous SNV	OVCH1:NM_183378:exon4:c.C397T:p.R133C	exonic	ENSG00000187950	NA	nonsynonymous SNV	ENSG00000187950:ENST00000318184:exon4:c.C397T:p.R133C	NA	NA	12p11.22	NA	NA	NA	NA	rs10843438	0.47	0.47	0.477	0.447484	0.5716	0.5347	0.3689	0.3185	0.4601	0.56	0.53	0.35	0.33	0.4826	0.56	0.18	T	0.855	P	0.285	B	.	.	1.000	P	1.32	L	-2.49	D	-0.972	T	0.000	T	0.148	-0.569	1.438	0.63	0.151	-0.544	5.503	-0.568535	NA	0.06	0.535137	0.31791	NA	0.486	NA	7.2439964
928	9	95872885	95872885	C	T	exonic	C9orf89	NA	synonymous SNV	C9orf89:NM_032310:exon3:c.C186T:p.L62L	exonic	ENSG00000165233	NA	synonymous SNV	ENSG00000165233:ENST00000375464:exon3:c.C186T:p.L62L,ENSG00000165233:ENST00000466409:exon3:c.C186T:p.L62L	Score=446;Name=lod=87	NA	9q22.31	Score=901;Name=V$ZID_01	NA	NA	NA	rs17593496	0.08	0.08	0.076	0.0595048	0.161	0.002	0.062	0.0356	0.045	0.16	NA	0.07	0.04	0.1145	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.290499	1.290499	NA	0.147326	0.046981	ID=COSM1180463;OCCURENCE=1(prostate)	0.051	NA	7.2438406
928	8	69434195	69434195	T	C	exonic	C8orf34	NA	synonymous SNV	C8orf34:NM_001195639:exon6:c.T927C:p.S309S,C8orf34:NM_052958:exon6:c.T927C:p.S309S	exonic	ENSG00000165084	NA	synonymous SNV	ENSG00000165084:ENST00000337103:exon5:c.T594C:p.S198S,ENSG00000165084:ENST00000521406:exon5:c.T594C:p.S198S,ENSG00000165084:ENST00000348340:exon6:c.T669C:p.S223S,ENSG00000165084:ENST00000518698:exon6:c.T927C:p.S309S,ENSG00000165084:ENST00000539993:exon6:c.T669C:p.S223S	Score=459;Name=lod=98	NA	8q13.2	Score=797;Name=V$OLF1_01	NA	NA	NA	rs2289831	0.19	0.19	0.201	0.207268	0.1392	0.1121	0.1455	0.4077	0.1483	0.15	0.11	0.14	0.38	0.1476	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.324447	1.324447	NA	0.136163	0.36246	NA	0.232	NA	7.2437036
928	20	2633936	2633936	T	C	exonic	NOP56	NA	synonymous SNV	NOP56:NM_006392:exon3:c.T105C:p.S35S	exonic	ENSG00000101361	NA	synonymous SNV	ENSG00000101361:ENST00000329276:exon3:c.T105C:p.S35S,ENSG00000101361:ENST00000445139:exon3:c.T105C:p.S35S	Score=559;Name=lod=250	NA	20p13	NA	Name=Pol2(b),Pol2-4H8,HEY1,Pol2	Name=14	NA	rs2073194	0.85	0.85	0.86	0.861222	0.8002	0.8462	0.8934	0.9228	0.8333	0.8	0.85	0.87	0.91	0.8285	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.975079	1.975079	NA	0.795	0.91103	NA	0.848	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117823.2;CLNDSDB=.;CLNDSDBID=.	7.2429666
928	12	6707526	6707526	G	A	exonic	CHD4	NA	synonymous SNV	CHD4:NM_001273:exon11:c.C1548T:p.P516P	exonic	ENSG00000111642	NA	synonymous SNV	ENSG00000111642:ENST00000309577:exon11:c.C1548T:p.P516P,ENSG00000111642:ENST00000357008:exon11:c.C1548T:p.P516P,ENSG00000111642:ENST00000544040:exon11:c.C1527T:p.P509P,ENSG00000111642:ENST00000544484:exon11:c.C1539T:p.P513P	Score=504;Name=lod=149	NA	12p13.31	Score=873;Name=V$AREB6_03	NA	NA	NA	rs11539543	0.09	0.09	0.077	0.0974441	0.1322	0.004	0.0634	0.1263	0.1431	0.13	0.0017	0.08	0.14	0.1294	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.044493	NA	NA	0.162326	0.129596	NA	0.116	NA	7.2427406
928	18	33725931	33725931	G	A	exonic	ELP2	NA	nonsynonymous SNV	ELP2:NM_001242879:exon7:c.G703A:p.V235M,ELP2:NM_001242877:exon9:c.G835A:p.V279M,ELP2:NM_001242878:exon9:c.G835A:p.V279M,ELP2:NM_001242876:exon10:c.G1030A:p.V344M,ELP2:NM_018255:exon10:c.G913A:p.V305M,ELP2:NM_001242875:exon11:c.G1108A:p.V370M	exonic	ENSG00000134759	NA	nonsynonymous SNV	ENSG00000134759:ENST00000423854:exon7:c.G703A:p.V235M,ENSG00000134759:ENST00000351393:exon9:c.G835A:p.V279M,ENSG00000134759:ENST00000542824:exon9:c.G835A:p.V279M,ENSG00000134759:ENST00000350494:exon10:c.G1030A:p.V344M,ENSG00000134759:ENST00000358232:exon10:c.G913A:p.V305M,ENSG00000134759:ENST00000539560:exon10:c.G913A:p.V305M,ENSG00000134759:ENST00000442325:exon11:c.G1108A:p.V370M	Score=630;Name=lod=486	NA	18q12.2	NA	NA	NA	NA	rs1785928	0.35	0.35	0.336	0.321685	0.3797	0.2014	0.3847	0.3865	0.2536	0.4	0.19	0.43	0.39	0.3427	0.43	0.14	T	0.0	B	0.004	B	0.000	N	1.000	P	-0.625	N	0.24	T	-0.918	T	0.000	T	0.146	-0.141	3.309	-1.7	-0.180	0.248	7.043	-0.141116	NA	0.06	0.371163	0.369042	ID=COSM1388588;OCCURENCE=1(large_intestine)	0.326	NA	7.2397704
928	1	32842319	32842319	T	C	exonic	BSDC1	NA	nonsynonymous SNV	BSDC1:NM_001143890:exon7:c.A415G:p.I139V,BSDC1:NM_001143889:exon8:c.A532G:p.I178V,BSDC1:NM_001143888:exon9:c.A751G:p.I251V,BSDC1:NM_018045:exon9:c.A700G:p.I234V	exonic	ENSG00000160058	NA	nonsynonymous SNV	ENSG00000160058:ENST00000526031:exon7:c.A415G:p.I139V,ENSG00000160058:ENST00000413080:exon8:c.A517G:p.I173V,ENSG00000160058:ENST00000419121:exon8:c.A532G:p.I178V,ENSG00000160058:ENST00000527163:exon8:c.A502G:p.I168V,ENSG00000160058:ENST00000341071:exon9:c.A751G:p.I251V,ENSG00000160058:ENST00000444377:exon9:c.A700G:p.I234V,ENSG00000160058:ENST00000446293:exon9:c.A751G:p.I251V,ENSG00000160058:ENST00000449308:exon9:c.A700G:p.I234V,ENSG00000160058:ENST00000455895:exon9:c.A700G:p.I234V	NA	NA	1p35.1	NA	NA	NA	NA	rs34885668	0.01	0.01	0.012	0.00838658	0.0328	NA	0.0058	0.0008	0.0041	0.04	NA	0.01	0.002	0.0243	0.04	0.33	T	0.007	B	0.02	B	0.251	N	1.000	N	0	N	1.0	T	-1.050	T	0.012	T	0.078	0.342	5.857	0.721	0.011	-0.093	4.765	0.342357	NA	0.24	0.037503	0.006627	NA	0.007	NA	7.2387304
928	3	13670536	13670536	A	G	exonic	FBLN2	NA	nonsynonymous SNV	FBLN2:NM_001998:exon11:c.A2560G:p.T854A,FBLN2:NM_001004019:exon12:c.A2701G:p.T901A,FBLN2:NM_001165035:exon12:c.A2701G:p.T901A	exonic	ENSG00000163520	NA	nonsynonymous SNV	ENSG00000163520:ENST00000295760:exon11:c.A2560G:p.T854A,ENSG00000163520:ENST00000535798:exon11:c.A2638G:p.T880A,ENSG00000163520:ENST00000404922:exon12:c.A2701G:p.T901A,ENSG00000163520:ENST00000492059:exon12:c.A2701G:p.T901A	NA	NA	3p25.1	NA	NA	NA	NA	rs9843344	0.81	0.81	0.778	0.805312	0.6938	0.9931	0.8314	0.7595	0.7699	0.69	0.99	0.82	0.77	0.7364	0.99	0.5	T	0.003	B	0.011	B	0.153	N	1.000	P	1.46	L	-2.24	D	-0.983	T	0.000	T	0.051	-0.261	2.748	-4.23	-0.772	0.056	5.462	-0.2607	NA	0.12	0.666236	0.753832	NA	0.833	NA	7.2368974
928	4	2175733	2175733	A	G	exonic	POLN	NA	synonymous SNV	POLN:NM_181808:exon9:c.T1323C:p.H441H	exonic	ENSG00000130997	NA	synonymous SNV	ENSG00000130997:ENST00000382865:exon9:c.T1323C:p.H441H,ENSG00000130997:ENST00000511885:exon11:c.T1323C:p.H441H	NA	NA	4p16.3	NA	NA	NA	NA	rs2022302	0.31	0.31	0.31	0.321885	0.1243	0.373	0.2435	0.5703	0.1922	0.13	0.37	0.25	0.57	0.1898	0.57	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.919	T	0.000	T	.	-1.809	0.009	-0.849	-0.617	-1.618	9.208	-1.809418	NA	NA	0.115698	0.504085	NA	0.384	NA	7.2368686
928	7	129950740	129950740	G	T	exonic	CPA4	NA	nonsynonymous SNV	CPA4:NM_001163446:exon8:c.G808T:p.G270C,CPA4:NM_016352:exon9:c.G907T:p.G303C	exonic	ENSG00000128510	NA	nonsynonymous SNV	ENSG00000128510:ENST00000493259:exon7:c.G595T:p.G199C,ENSG00000128510:ENST00000445470:exon8:c.G808T:p.G270C,ENSG00000128510:ENST00000222482:exon9:c.G907T:p.G303C	Score=538;Name=lod=205	NA	7q32.2	NA	NA	NA	NA	rs2171492	0.33	0.33	0.304	0.316693	0.3638	0.374	0.3156	0.2065	0.3589	0.35	0.4	0.34	0.22	0.3478	0.4	0.08	T	0.012	B	0.095	B	0.023	N	1.000	P	0.375	N	2.81	T	-0.898	T	0.000	T	0.12	2.032	12.75	0.479	-0.068	0.552	11.794	2.032247	2.032247	0.12	0.384884	0.227644	NA	0.355	NA	7.2368494
928	6	36293083	36293083	G	A	exonic	C6orf222	NA	nonsynonymous SNV	C6orf222:NM_001010903:exon6:c.C1145T:p.P382L	exonic	ENSG00000189325	NA	nonsynonymous SNV	ENSG00000189325:ENST00000437635:exon6:c.C1145T:p.P382L	NA	NA	6p21.31	NA	NA	NA	NA	rs76331220	0.02	0.02	0.021	0.0153754	0.0358	0.001	0.0303	0.0038	0.0143	0.04	0.0017	0.03	0.0041	0.0248	0.04	0.44	T	0.001	B	0.001	B	0.245	N	1.000	N	-0.55	N	0.95	T	-1.038	T	0.015	T	0.023	1.074	9.385	-0.702	-0.111	0.163	7.782	1.074066	NA	NA	0.037326	0.008625	NA	0.014	NA	7.2354074
928	16	25239805	25239805	G	C	exonic	AQP8	NA	nonsynonymous SNV	AQP8:NM_001169:exon6:c.G778C:p.A260P	exonic	ENSG00000103375	NA	nonsynonymous SNV	ENSG00000103375:ENST00000219660:exon6:c.G778C:p.A260P,ENSG00000103375:ENST00000566125:exon6:c.G760C:p.A254P	NA	NA	16p12.1	NA	NA	NA	NA	rs2287798	0.41	0.41	0.393	0.414137	0.3459	0.5298	0.4308	0.4077	0.362	0.35	0.51	0.4	0.41	0.3813	0.51	0.16	T	0.165	B	0.043	B	0.024	N	1.000	P	0	N	-2.74	D	-1.024	T	0.000	T	0.056	1.167	9.751	-1.46	-0.007	0.297	8.671	1.167366	NA	0.2	0.371047	0.414656	ID=COSM148055,COSM148054;OCCURENCE=1(stomach)	0.399	NA	7.2350864
929	6	36930814	36930814	T	C	exonic	PI16	NA	synonymous SNV	PI16:NM_153370:exon5:c.T696C:p.T232T,PI16:NM_001199159:exon6:c.T696C:p.T232T	exonic	ENSG00000164530	NA	synonymous SNV	ENSG00000164530:ENST00000373674:exon5:c.T696C:p.T232T	NA	NA	6p21.2	NA	Name=GABP,ERalpha_a,PU.1,SRF,Max	Name=86	NA	rs41272198	0.08	0.08	0.073	0.0692891	0.168	0.005	0.1066	0.0174	0.0777	0.16	0.01	0.1	0.01	0.1155	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.223518	NA	NA	0.148256	0.045166	NA	0.116	NA	7.2349106
929	12	32908518	32908518	G	A	exonic	YARS2	NA	synonymous SNV	YARS2:NM_001040436:exon1:c.C291T:p.G97G	exonic	ENSG00000139131	NA	synonymous SNV	ENSG00000139131:ENST00000324868:exon1:c.C291T:p.G97G,ENSG00000139131:ENST00000548490:exon1:c.C213T:p.G71G	Score=550;Name=lod=230	NA	12p11.21	NA	Name=TAF1,Pol2,HA-E2F1	NA	NA	rs11539444	0.13	0.13	0.126	0.126997	0.162	0.0833	0.0937	0.177	0.092	0.16	0.07	0.09	0.17	0.1264	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.698504	1.698504	NA	0.145233	0.164321	NA	0.08	NA	7.2330336
929	16	737269	737269	C	T	exonic	WDR24	NA	synonymous SNV	WDR24:NM_032259:exon3:c.G807A:p.T269T	exonic	ENSG00000127580	NA	synonymous SNV	ENSG00000127580:ENST00000293883:exon3:c.G807A:p.T269T,ENSG00000127580:ENST00000248142:exon7:c.G1197A:p.T399T	NA	NA	16p13.3	Score=923;Name=V$MYCMAX_01	Name=CTCF	NA	NA	rs17850290	0.06	0.06	0.056	0.0874601	0.1461	0.002	0.0706	0.0053	0.2382	0.14	0.0017	0.09	0.0041	0.1267	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.229593	NA	NA	0.162517	0.033197	NA	0.13	NA	7.2313496
929	17	61566031	61566031	G	A	exonic	ACE	NA	synonymous SNV	ACE:NM_001178057:exon5:c.G606A:p.T202T,ACE:NM_152830:exon5:c.G606A:p.T202T,ACE:NM_000789:exon16:c.G2328A:p.T776T	exonic	ENSG00000159640,ENSG00000264813	NA	synonymous SNV	ENSG00000159640:ENST00000582761:exon2:c.G96A:p.T32T,ENSG00000159640:ENST00000290863:exon5:c.G606A:p.T202T,ENSG00000159640:ENST00000413513:exon5:c.G606A:p.T202T,ENSG00000159640:ENST00000421982:exon5:c.G258A:p.T86T,ENSG00000159640:ENST00000490216:exon5:c.G606A:p.T202T,ENSG00000264813:ENST00000577647:exon5:c.G606A:p.T202T,ENSG00000159640:ENST00000290866:exon16:c.G2328A:p.T776T,ENSG00000159640:ENST00000428043:exon16:c.G2328A:p.T776T	NA	Name=Angiotensin-converting enzyme activity	17q23.3	Score=879;Name=V$STAT3_01	Name=SRF	NA	NA	rs4343	0.62	0.62	0.601	0.643171	0.4354	0.6796	0.6066	0.8048	0.6268	0.44	0.69	0.6	0.83	0.5373	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.190608	NA	NA	0.463256	0.749206	NA	0.659	NA	7.2307106
929	19	57085769	57085769	G	C	exonic	ZNF470	NA	nonsynonymous SNV	ZNF470:NM_001001668:exon4:c.G67C:p.V23L	exonic	ENSG00000197016	NA	nonsynonymous SNV	ENSG00000197016:ENST00000391709:exon3:c.G67C:p.V23L,ENSG00000197016:ENST00000330619:exon4:c.G67C:p.V23L,ENSG00000197016:ENST00000601902:exon4:c.G67C:p.V23L	NA	NA	19q13.43	NA	NA	NA	NA	rs10421285	0.4	0.4	0.4	0.423922	0.3698	0.2788	0.3357	0.6657	0.365	0.36	0.26	0.35	0.64	0.368	0.64	0.41	T	0.0	B	0.001	B	.	.	1.000	P	1.685	L	3.54	T	-0.995	T	0.000	T	0.054	0.673	7.6	-3.06	-0.621	0.740	4.406	0.672565	NA	0.12	0.365	0.613936	ID=COSM148776;OCCURENCE=1(stomach)	0.457	NA	7.2305334
929	18	71928150	71928150	C	T	exonic	CYB5A	NA	synonymous SNV	CYB5A:NM_001914:exon3:c.G288A:p.P96P,CYB5A:NM_148923:exon3:c.G288A:p.P96P	exonic	ENSG00000166347	NA	synonymous SNV	ENSG00000166347:ENST00000299438:exon3:c.G66A:p.P22P,ENSG00000166347:ENST00000340533:exon3:c.G288A:p.P96P,ENSG00000166347:ENST00000494131:exon3:c.G288A:p.P96P	Score=295;Name=lod=21	NA	18q22.3	NA	NA	Name=2	NA	rs7238987	0.14	0.14	0.132	0.141174	0.1332	0.0813	0.2248	0.1596	0.1268	0.14	0.1	0.17	0.16	0.1526	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.775948	NA	NA	0.150465	0.148207	NA	0.246	NA	7.2304016
929	12	52682141	52682141	G	A	intronic	KRT81	NA	NA	NA	intronic	ENSG00000170442,ENSG00000205426	NA	NA	NA	Score=412;Name=lod=63	NA	12q13.13	NA	Name=Pol2	Name=19	NA	rs12812669	0.18	0.18	0.163	0.1873	0.2644	0.0982	0.183	0.1331	0.2761	0.26	0.09	0.19	0.14	0.2405	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.451994	1.451994	NA	0.265349	0.149342	NA	0.167	CLINSIG=untested;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000056953.1;CLNDSDB=.;CLNDSDBID=.	7.229751
929	8	135602581	135602581	A	G	exonic	ZFAT	NA	synonymous SNV	ZFAT:NM_001174157:exon7:c.T2307C:p.S769S,ZFAT:NM_001167583:exon8:c.T2457C:p.S819S,ZFAT:NM_001174158:exon8:c.T2457C:p.S819S,ZFAT:NM_020863:exon8:c.T2493C:p.S831S,ZFAT:NM_001029939:exon9:c.T2457C:p.S819S	exonic	ENSG00000066827	NA	synonymous SNV	ENSG00000066827:ENST00000523399:exon7:c.T2307C:p.S769S,ENSG00000066827:ENST00000377838:exon8:c.T2493C:p.S831S,ENSG00000066827:ENST00000429442:exon8:c.T2457C:p.S819S,ENSG00000066827:ENST00000520214:exon8:c.T2457C:p.S819S,ENSG00000066827:ENST00000520356:exon8:c.T2457C:p.S819S,ENSG00000066827:ENST00000523243:exon8:c.T2493C:p.S831S,ENSG00000066827:ENST00000520727:exon9:c.T2457C:p.S819S	Score=599;Name=lod=362	NA	8q24.22	Score=783;Name=V$MEF2_01	NA	NA	NA	rs3739425	0.31	0.31	0.268	NA	NA	NA	NA	NA	NA	0.2	0.55	0.3	0.2	0.2623	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.061133	NA	NA	0.175926	0.184378	NA	0.152	NA	7.2284406
929	20	56137807	56137807	A	G	exonic	PCK1	NA	synonymous SNV	PCK1:NM_002591:exon4:c.A462G:p.S154S	exonic	ENSG00000124253	NA	synonymous SNV	ENSG00000124253:ENST00000535860:exon2:c.A66G:p.S22S,ENSG00000124253:ENST00000319441:exon4:c.A462G:p.S154S	Score=492;Name=lod=133	NA	20q13.31	Score=791;Name=V$CDPCR3_01	Name=HEY1	NA	NA	rs1042523	0.32	0.32	0.311	0.313299	0.5229	0.0308	0.3357	0.3222	0.3609	0.53	0.03	0.37	0.31	0.4111	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.41894	NA	NA	0.504884	0.341807	NA	0.478	NA	7.2277826
929	13	28195972	28195972	C	T	UTR5	POLR1D	NM_152705:c.-149C>T,NM_015972:c.-149C>T	NA	NA	UTR5	ENSG00000186184	ENST00000302979:c.-149C>T	NA	NA	NA	NA	13q12.2	Score=805;Name=V$PAX4_01	Name=ELF1_(SC-631),E2F6_(H-50),TAF1,HMGN3,GABP,Pol2(phosphoS2),SP1,Pol2,HEY1,ZEB1_(SC-25388),AP-2gamma,c-Myc,CCNT2,Nrf1,IRF1,TBP,AP-2alpha,Egr-1,Pol2-4H8,HA-E2F1	Name=130	NA	rs2232676	0.06	0.06	0.048	0.0808706	0.1074	0.0198	0.0648	0.0855	0.1217	0.11	0.01	0.08	0.04	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.695789	NA	NA	NA	NA	ID=COSN392800;OCCURENCE=1(lung)	NA	NA	7.2259334
929	12	110226379	110226379	G	A	exonic	TRPV4	NA	synonymous SNV	TRPV4:NM_001177433:exon10:c.C1713T:p.I571I,TRPV4:NM_001177428:exon11:c.C1893T:p.I631I,TRPV4:NM_147204:exon11:c.C1854T:p.I618I,TRPV4:NM_001177431:exon13:c.C1932T:p.I644I,TRPV4:NM_021625:exon13:c.C2034T:p.I678I	exonic	ENSG00000111199	NA	synonymous SNV	ENSG00000111199:ENST00000544971:exon10:c.C1713T:p.I571I,ENSG00000111199:ENST00000537083:exon11:c.C1854T:p.I618I,ENSG00000111199:ENST00000541794:exon11:c.C1893T:p.I631I,ENSG00000111199:ENST00000346520:exon12:c.C1854T:p.I618I,ENSG00000111199:ENST00000392719:exon12:c.C1893T:p.I631I,ENSG00000111199:ENST00000418703:exon12:c.C2034T:p.I678I,ENSG00000111199:ENST00000261740:exon13:c.C2034T:p.I678I,ENSG00000111199:ENST00000536838:exon13:c.C1932T:p.I644I	Score=742;Name=lod=1386	NA	12q24.11	Score=950;Name=V$GATA1_01	NA	NA	NA	rs3742037	0.16	0.16	0.123	0.180312	0.1352	0.1905	0.2738	0.1059	0.2505	0.15	0.15	0.28	0.09	0.1666	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.113635	NA	NA	0.139535	0.11212	NA	0.196	NA	7.2253316
930	1	75038228	75038228	A	C	exonic	C1orf173	NA	nonsynonymous SNV	C1orf173:NM_001002912:exon14:c.T3166G:p.L1056V	exonic	ENSG00000178965	NA	nonsynonymous SNV	ENSG00000178965:ENST00000326665:exon14:c.T3166G:p.L1056V	NA	NA	1p31.1	NA	NA	NA	NA	rs11580409	0.39	0.39	0.378	0.375799	0.3579	0.5794	0.33	0.2466	0.3916	0.36	0.6	0.3	0.25	0.3785	0.6	0.37	T	0.0	B	0.0	B	.	.	1.000	P	-1.1	N	2.83	T	-0.900	T	0.003	T	0.015	-1.451	0.019	2.51	0.520	-0.554	7.414	-1.451229	NA	0	0.372209	0.251248	NA	0.348	NA	7.2247244
930	19	40368395	40368395	C	T	exonic	FCGBP	NA	nonsynonymous SNV	FCGBP:NM_003890:exon28:c.G12953A:p.R4318H	exonic	ENSG00000090920	NA	nonsynonymous SNV	ENSG00000090920:ENST00000221347:exon28:c.G12953A:p.R4318H	NA	NA	19q13.2	NA	NA	NA	NA	rs28472548	0.65	0.65	0.688	0.608826	0.5646	0.7252	0.5605	0.6104	0.5665	0.59	0.74	0.6	0.68	0.5441	0.74	0.17	T	0.0	B	0.001	B	0.909	N	1.000	P	0.79	N	-1.05	T	-0.914	T	0.000	T	0.088	-0.247	2.811	3.05	0.238	-0.731	7.853	-0.247062	NA	0.22	NA	NA	NA	NA	NA	7.2246334
930	2	159860395	159860395	C	T	intronic	TANC1	NA	NA	NA	ncRNA_intronic	ENSG00000213189	NA	NA	NA	Score=756;Name=lod=1576	NA	2q24.2	NA	Name=YY1_(C-20),E2F6_(H-50)	Name=6	NA	rs74584069	0.07	0.07	0.063	0.0694888	0.1103	0.0595	0.0605	0.0439	0.0787	0.09	0.05	0.07	0.05	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.499165	2.499165	NA	NA	NA	NA	0.058	NA	7.2230333
930	2	96795608	96795608	T	G	exonic	ASTL	NA	nonsynonymous SNV	ASTL:NM_001002036:exon8:c.A829C:p.K277Q	exonic	ENSG00000188886	NA	nonsynonymous SNV	ENSG00000188886:ENST00000342380:exon8:c.A829C:p.K277Q	NA	NA	2q11.1	NA	NA	NA	NA	rs1657502	0.42	0.42	0.368	0.384185	0.3559	0.621	0.4712	0.2784	0.2505	0.37	0.61	0.42	0.26	0.3932	0.61	0.26	T	0.026	B	0.025	B	0.257	N	1.000	P	1.65	L	-0.1	T	-0.907	T	0.000	T	0.049	1.931	12.41	-2.33	-0.187	0.677	12.28	1.930962	1.930962	0.22	0.362209	0.294371	NA	0.435	NA	7.2220244
930	9	37592452	37592452	G	A	exonic	TOMM5	NA	synonymous SNV	TOMM5:NM_001001790:exon1:c.C78T:p.S26S,TOMM5:NM_001134484:exon1:c.C78T:p.S26S,TOMM5:NM_001134485:exon1:c.C78T:p.S26S	exonic	ENSG00000175768,ENSG00000256966	NA	synonymous SNV	ENSG00000175768:ENST00000321301:exon1:c.C78T:p.S26S,ENSG00000175768:ENST00000377773:exon1:c.C78T:p.S26S,ENSG00000175768:ENST00000401811:exon1:c.C78T:p.S26S,ENSG00000256966:ENST00000537239:exon1:c.C15T:p.S5S,ENSG00000175768:ENST00000540941:exon1:c.C15T:p.S5S,ENSG00000175768:ENST00000544379:exon1:c.C78T:p.S26S	Score=648;Name=lod=573	NA	9p13.2	NA	Name=HEY1,NFKB,TBP,ELK4,Pol2(b),HA-E2F1,Pol2-4H8,ZNF263,YY1,Oct-2,POU2F2,E2F4,TAF1,E2F6,Pol2,NELFe	NA	NA	rs7021977	0.15	0.15	0.146	0.142572	0.1581	0.001	0.1268	0.3124	0.0542	0.16	0.0017	0.14	0.31	0.136	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.758541	1.758541	NA	0.150786	0.296693	NA	0.261	NA	7.2217806
930	17	33448818	33448818	T	C	exonic	FNDC8	NA	nonsynonymous SNV	FNDC8:NM_017559:exon1:c.T106C:p.S36P	exonic	ENSG00000073598	NA	nonsynonymous SNV	ENSG00000073598:ENST00000158009:exon1:c.T106C:p.S36P	Score=399;Name=lod=56	NA	17q12	NA	NA	NA	NA	rs1871892	0.8	0.8	0.803	0.840256	0.6769	0.9137	0.8357	0.8661	0.9008	0.67	0.92	0.81	0.86	0.7532	0.92	1	T	0.0	B	0.0	B	0.778	N	1.000	P	-0.805	N	1.83	T	-0.988	T	0.000	T	0.036	-0.525	1.608	3.61	0.638	0.372	6.577	-0.524872	NA	NA	0.68186	0.857467	NA	0.804	NA	7.2213734
930	5	147012291	147012291	G	A	exonic	JAKMIP2	NA	synonymous SNV	JAKMIP2:NM_001270934:exon12:c.C1665T:p.D555D,JAKMIP2:NM_001270941:exon13:c.C1728T:p.D576D,JAKMIP2:NM_014790:exon13:c.C1728T:p.D576D	exonic	ENSG00000176049	NA	synonymous SNV	ENSG00000176049:ENST00000333010:exon12:c.C1602T:p.D534D,ENSG00000176049:ENST00000507386:exon12:c.C1665T:p.D555D,ENSG00000176049:ENST00000265272:exon13:c.C1728T:p.D576D	Score=669;Name=lod=698	NA	5q32	NA	NA	Name=2	NA	rs3763094	0.13	0.13	0.115	0.157149	0.1551	0.2073	0.2233	0.0212	0.2444	0.14	0.19	0.18	0.03	0.1597	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.163124	NA	NA	0.131744	0.038584	NA	0.152	NA	7.2201226
930	7	94030899	94030899	T	C	exonic	COL1A2	NA	synonymous SNV	COL1A2:NM_000089:exon6:c.T246C:p.D82D	exonic	ENSG00000164692	NA	synonymous SNV	ENSG00000164692:ENST00000297268:exon6:c.T246C:p.D82D	Score=519;Name=lod=172	NA	7q21.3	NA	NA	Name=16	NA	rs1800222	0.31	0.31	0.329	0.304313	0.1491	0.3948	0.1729	0.5741	0.0992	0.13	0.42	0.18	0.56	0.1744	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.311722	NA	NA	0.123256	0.503404	NA	0.225	NA	7.2199106
930	7	21723431	21723431	G	A	exonic	DNAH11	NA	synonymous SNV	DNAH11:NM_001277115:exon32:c.G5490A:p.L1830L	exonic	ENSG00000105877	NA	synonymous SNV	ENSG00000105877:ENST00000409508:exon32:c.G5490A:p.L1830L,ENSG00000105877:ENST00000328843:exon33:c.G5511A:p.L1837L	Score=487;Name=lod=127	NA	7p15.3	NA	NA	NA	NA	rs55666134	0.12	0.12	0.121	0.102236	0.164	0.1429	0.1023	0.0189	0.1094	0.16	0.15	0.12	0.02	0.1346	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.611581	NA	NA	0.150157	0.043647	NA	0.051	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000079623.1;CLNDSDB=.;CLNDSDBID=.	7.2179096
930	19	3979408	3979408	A	G	exonic	EEF2	NA	synonymous SNV	EEF2:NM_001961:exon11:c.T1632C:p.H544H	exonic	ENSG00000167658	NA	synonymous SNV	ENSG00000167658:ENST00000309311:exon11:c.T1632C:p.H544H	Score=417;Name=lod=66	NA	19p13.3	NA	Name=ZNF263,Pol2-4H8,CTCF_(SC-5916)	Name=4	NA	rs36526	0.9	0.9	0.903	0.913139	0.8012	0.9931	0.8631	0.9894	0.8783	0.81	0.99	0.84	0.98	0.8493	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.522755	NA	NA	0.798372	0.961189	NA	0.775	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116939.2;CLNDSDB=.;CLNDSDBID=.	7.2177946
930	2	165586466	165586466	T	C	exonic	COBLL1	NA	synonymous SNV	COBLL1:NM_014900:exon3:c.A390G:p.P130P	exonic	ENSG00000082438	NA	synonymous SNV	ENSG00000082438:ENST00000342193:exon3:c.A390G:p.P130P,ENSG00000082438:ENST00000375458:exon3:c.A390G:p.P130P,ENSG00000082438:ENST00000456693:exon3:c.A315G:p.P105P,ENSG00000082438:ENST00000392717:exon4:c.A504G:p.P168P,ENSG00000082438:ENST00000409184:exon4:c.A504G:p.P168P,ENSG00000082438:ENST00000414843:exon4:c.A390G:p.P130P,ENSG00000082438:ENST00000439313:exon4:c.A411G:p.P137P,ENSG00000082438:ENST00000448708:exon4:c.A390G:p.P130P,ENSG00000082438:ENST00000456171:exon4:c.A390G:p.P130P,ENSG00000082438:ENST00000194871:exon5:c.A549G:p.P183P,ENSG00000082438:ENST00000444537:exon5:c.A456G:p.P152P	Score=593;Name=lod=342	NA	2q24.3	NA	NA	NA	NA	rs13392281	0.18	0.18	0.175	0.172524	0.1571	0.1052	0.111	0.329	0.09	0.16	0.12	0.11	0.32	0.1454	0.32	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.980	T	0.000	T	.	1.02	9.165	1.87	0.449	0.487	7.145	1.019676	NA	NA	0.147674	0.310173	NA	0.196	NA	7.2164926
930	7	30791848	30791848	G	A	exonic	INMT	NA	nonsynonymous SNV	INMT:NM_001199219:exon1:c.G82A:p.D28N,INMT:NM_006774:exon1:c.G82A:p.D28N	exonic	ENSG00000241644,ENSG00000254959	NA	nonsynonymous SNV	ENSG00000241644:ENST00000013222:exon1:c.G82A:p.D28N,ENSG00000241644:ENST00000409539:exon1:c.G82A:p.D28N,ENSG00000254959:ENST00000458257:exon1:c.G82A:p.D28N	NA	NA	7p14.3	NA	NA	NA	NA	rs4723010	0.26	0.26	0.238	0.258786	0.3936	0.0367	0.3314	0.2784	0.271	0.39	0.03	0.34	0.26	0.3301	0.39	0.54	T	0.004	B	0.009	B	0.552	N	1.000	P	1.67	L	3.01	T	-0.901	T	0.000	T	0.046	0.362	5.964	-2.41	-0.566	-0.185	1.737	0.36185	NA	0.53	0.393488	0.283477	NA	0.283	NA	7.2161454
930	19	1004740	1004740	T	C	exonic	GRIN3B	NA	nonsynonymous SNV	GRIN3B:NM_138690:exon3:c.T1240C:p.W414R	exonic	ENSG00000116032	NA	nonsynonymous SNV	ENSG00000116032:ENST00000234389:exon3:c.T1240C:p.W414R	NA	NA	19p13.3	NA	Name=Pol2	NA	NA	rs2240157	0.65	0.65	0.639	0.68151	0.7157	0.501	0.5403	0.8048	0.7658	0.71	0.48	0.6	0.79	0.6898	0.79	0.55	T	0.0	B	0.0	B	0.024	N	1.000	P	-2.175	N	0.88	T	-0.988	T	0.000	T	0.044	-1.149	0.103	3.35	0.880	0.585	9.816	-1.149021	NA	0.86	0.711888	0.785552	NA	0.717	NA	7.2159454
931	2	182521578	182521578	G	A	exonic	CERKL	NA	synonymous SNV	CERKL:NM_001030311:exon1:c.C156T:p.F52F,CERKL:NM_001030312:exon1:c.C156T:p.F52F,CERKL:NM_001030313:exon1:c.C156T:p.F52F,CERKL:NM_001160277:exon1:c.C156T:p.F52F,CERKL:NM_201548:exon1:c.C156T:p.F52F	exonic	ENSG00000188452	NA	synonymous SNV	ENSG00000188452:ENST00000339098:exon1:c.C156T:p.F52F,ENSG00000188452:ENST00000374967:exon1:c.C156T:p.F52F,ENSG00000188452:ENST00000374969:exon1:c.C156T:p.F52F,ENSG00000188452:ENST00000374970:exon1:c.C156T:p.F52F,ENSG00000188452:ENST00000409440:exon1:c.C156T:p.F52F,ENSG00000188452:ENST00000410087:exon1:c.C156T:p.F52F,ENSG00000188452:ENST00000421817:exon1:c.C156T:p.F52F,ENSG00000188452:ENST00000452174:exon1:c.C156T:p.F52F	Score=497;Name=lod=139	NA	2q31.3	NA	Name=CtBP2,ZNF263,Pol2,CTCF	Name=43	NA	rs1473295	0.48	0.48	0.421	0.507388	0.4433	0.7312	0.5216	0.1747	0.7822	0.43	0.74	0.49	0.23	0.5257	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.453347	1.453347	NA	0.482787	0.244439	NA	0.42	NA	7.2148796
931	12	4830000	4830000	T	G	exonic	GALNT8	NA	nonsynonymous SNV	GALNT8:NM_017417:exon1:c.T157G:p.Y53D	exonic	ENSG00000130035	NA	nonsynonymous SNV	ENSG00000130035:ENST00000252318:exon1:c.T157G:p.Y53D	NA	NA	12p13.32	NA	NA	Name=3	NA	rs10849133	0.41	0.41	0.396	0.381989	0.3777	0.3611	0.415	0.4977	0.228	0.37	0.4	0.4	0.51	0.3594	0.51	0.64	T	0.0	B	0.0	B	0.000	N	1.000	P	-0.69	N	0.69	T	-0.938	T	0.000	T	0.019	-0.703	0.963	0.482	-0.294	0.341	0.275	-0.702517	NA	0.54	0.38186	0.465275	ID=COSM1128586;OCCURENCE=1(prostate)	0.406	NA	7.2143734
931	6	159185563	159185563	T	A	exonic	SYTL3	NA	nonsynonymous SNV	SYTL3:NM_001242395:exon16:c.T1556A:p.L519Q,SYTL3:NM_001009991:exon17:c.T1556A:p.L519Q,SYTL3:NM_001242394:exon18:c.T1760A:p.L587Q,SYTL3:NM_001242384:exon19:c.T1760A:p.L587Q	exonic	ENSG00000164674	NA	nonsynonymous SNV	ENSG00000164674:ENST00000367081:exon10:c.T938A:p.L313Q,ENSG00000164674:ENST00000297239:exon17:c.T1760A:p.L587Q,ENSG00000164674:ENST00000360448:exon17:c.T1556A:p.L519Q	NA	NA	6q25.3	NA	Name=Pol2-4H8,Oct-2,Pol2,POU2F2	NA	NA	rs3123101	0.53	0.53	0.524	0.539537	0.7386	0.2143	0.4352	0.6256	0.6278	0.75	0.19	0.51	0.62	0.6406	0.75	0.57	T	0.0	B	0.0	B	0.029	N	1.000	P	-1.04	N	2.26	T	-1.030	T	0.024	T	0.193	0.295	5.595	3.22	0.292	0.852	5.885	0.294611	NA	1	0.74093	0.675216	NA	0.529	NA	7.2132034
931	3	121563355	121563355	T	C	exonic	EAF2	NA	synonymous SNV	EAF2:NM_018456:exon2:c.T162C:p.G54G	exonic	ENSG00000145088	NA	synonymous SNV	ENSG00000145088:ENST00000273668:exon2:c.T162C:p.G54G,ENSG00000145088:ENST00000451944:exon2:c.T162C:p.G54G,ENSG00000145088:ENST00000490434:exon2:c.T162C:p.G54G	Score=620;Name=lod=441	NA	3q13.33	Score=896;Name=V$AREB6_02	NA	NA	NA	rs9884018	0.27	0.27	0.261	0.246206	0.1382	0.6161	0.1455	0.1339	0.1994	0.14	0.64	0.14	0.13	0.1787	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.525168	NA	NA	0.137674	0.162279	ID=COSM1130361;OCCURENCE=1(prostate)	0.159	NA	7.2120926
931	11	32956620	32956620	A	G	exonic	QSER1	NA	synonymous SNV	QSER1:NM_001076786:exon4:c.A3429G:p.P1143P	exonic	ENSG00000060749	NA	synonymous SNV	ENSG00000060749:ENST00000399302:exon4:c.A3429G:p.P1143P,ENSG00000060749:ENST00000527788:exon5:c.A2712G:p.P904P	Score=634;Name=lod=501	NA	11p13	NA	NA	NA	NA	rs7481878	0.81	0.81	0.773	0.797923	0.8082	0.995	0.8458	0.5522	0.8824	0.81	0.99	0.82	0.58	0.8249	0.99	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.007	T	0.000	T	.	0.128	4.688	3.08	0.919	2.018	6.649	0.127842	NA	NA	0.822364	0.588749	NA	0.833	NA	7.2112026
931	19	9024994	9024994	C	T	exonic	MUC16	NA	nonsynonymous SNV	MUC16:NM_024690:exon16:c.G36868A:p.E12290K	exonic	ENSG00000181143	NA	nonsynonymous SNV	ENSG00000181143:ENST00000397910:exon16:c.G36868A:p.E12290K	NA	NA	19p13.2	NA	NA	NA	NA	rs67631215	0.31	0.31	0.307	0.304113	0.4026	0.2421	0.2939	0.2201	0.3875	0.41	0.27	0.33	0.21	0.3414	0.41	0	D	0.009	B	0.013	B	.	.	.	.	1.6	L	0.94	T	-0.971	T	0.000	T	0.022	1.283	10.19	1.51	0.643	-0.021	5.630	1.282635	1.282635	NA	0.378751	0.247033	ID=COSM148476;OCCURENCE=1(stomach)	0.297	NA	7.2105824
931	14	81562998	81562998	T	C	exonic	TSHR	NA	synonymous SNV	TSHR:NM_000369:exon7:c.T561C:p.N187N,TSHR:NM_001018036:exon7:c.T561C:p.N187N,TSHR:NM_001142626:exon7:c.T561C:p.N187N	exonic	ENSG00000165409	NA	synonymous SNV	ENSG00000165409:ENST00000298171:exon7:c.T561C:p.N187N,ENSG00000165409:ENST00000342443:exon7:c.T561C:p.N187N,ENSG00000165409:ENST00000554263:exon7:c.T561C:p.N187N,ENSG00000165409:ENST00000554435:exon7:c.T561C:p.N187N,ENSG00000165409:ENST00000541158:exon8:c.T561C:p.N187N	Score=458;Name=lod=97	NA	14q31.1	Score=945;Name=V$SOX5_01	NA	NA	NA	rs2075179	0.29	0.29	0.321	0.30012	0.1292	0.3036	0.1427	0.5953	0.1851	0.12	0.31	0.14	0.62	0.1913	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.965478	NA	NA	0.135698	0.531321	ID=COSM147826;OCCURENCE=1(stomach)	0.268	NA	7.2104686
931	7	107872816	107872816	G	A	exonic	NRCAM	NA	synonymous SNV	NRCAM:NM_001037132:exon4:c.C381T:p.N127N,NRCAM:NM_005010:exon6:c.C363T:p.N121N,NRCAM:NM_001193582:exon7:c.C381T:p.N127N,NRCAM:NM_001193583:exon7:c.C381T:p.N127N,NRCAM:NM_001193584:exon7:c.C381T:p.N127N	exonic	ENSG00000091129	NA	synonymous SNV	ENSG00000091129:ENST00000417701:exon4:c.C363T:p.N121N,ENSG00000091129:ENST00000425651:exon4:c.C381T:p.N127N,ENSG00000091129:ENST00000351718:exon6:c.C363T:p.N121N,ENSG00000091129:ENST00000379024:exon7:c.C381T:p.N127N,ENSG00000091129:ENST00000379028:exon7:c.C381T:p.N127N,ENSG00000091129:ENST00000379022:exon8:c.C381T:p.N127N,ENSG00000091129:ENST00000413765:exon8:c.C381T:p.N127N	Score=483;Name=lod=123	NA	7q31.1	NA	NA	Name=11	NA	rs2072546	0.23	0.23	0.196	0.213059	0.1243	0.5466	0.2723	0.0061	0.1984	0.13	0.54	0.25	0.01	0.1966	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.214067	NA	NA	0.135814	0.032683	ID=COSM1447237,COSM1447238;OCCURENCE=1(large_intestine)	0.109	NA	7.2099526
931	20	16410559	16410559	A	T	exonic	KIF16B	NA	synonymous SNV	KIF16B:NM_001199865:exon13:c.T1371A:p.I457I,KIF16B:NM_001199866:exon13:c.T1371A:p.I457I,KIF16B:NM_024704:exon13:c.T1371A:p.I457I	exonic	ENSG00000089177	NA	synonymous SNV	ENSG00000089177:ENST00000354981:exon13:c.T1371A:p.I457I,ENSG00000089177:ENST00000355755:exon13:c.T1371A:p.I457I,ENSG00000089177:ENST00000408042:exon13:c.T1371A:p.I457I	Score=648;Name=lod=576	NA	20p12.1	Score=873;Name=V$OCT1_Q6	NA	NA	NA	rs34550969	0.09	0.09	0.085	0.0780751	0.173	0.0179	0.1196	0.0076	0.1084	0.17	0.02	0.12	0.01	0.1216	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.420389	1.420389	NA	0.162791	0.031321	NA	0.116	NA	7.2092756
931	7	66648157	66648157	C	T	exonic	TYW1	NA	synonymous SNV	TYW1:NM_018264:exon14:c.C1743T:p.N581N	exonic	ENSG00000198874	NA	synonymous SNV	ENSG00000198874:ENST00000359626:exon14:c.C1743T:p.N581N	Score=524;Name=lod=180	NA	7q11.21	NA	NA	Name=15	NA	rs4145350	0.22	0.22	0.19	NA	NA	NA	NA	NA	NA	0.21	0.08	0.23	0.37	0.224	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.022663	NA	NA	0.233721	0.344303	NA	0.058	NA	7.2089456
931	2	71044211	71044211	C	T	exonic	CLEC4F	NA	nonsynonymous SNV	CLEC4F:NM_001258027:exon4:c.G302A:p.R101Q,CLEC4F:NM_173535:exon4:c.G302A:p.R101Q	exonic	ENSG00000152672	NA	nonsynonymous SNV	ENSG00000152672:ENST00000272367:exon4:c.G302A:p.R101Q,ENSG00000152672:ENST00000426626:exon4:c.G302A:p.R101Q	NA	NA	2p13.3	NA	NA	NA	NA	rs2075221	0.35	0.35	0.328	0.330471	0.3817	0.5248	0.402	0.028	0.4356	0.38	0.6	0.34	0.03	0.3759	0.6	1	T	0.001	B	0.0	B	0.100	N	1.000	P	-1.7	N	5.0	T	-1.032	T	0.000	T	0.019	-0.508	1.674	3.88	0.878	0.690	7.714	-0.508202	NA	1	0.36686	0.096005	NA	0.29	NA	7.2088734
931	17	39119942	39119942	G	A	exonic	KRT39	NA	synonymous SNV	KRT39:NM_213656:exon3:c.C645T:p.D215D	exonic	ENSG00000196859	NA	synonymous SNV	ENSG00000196859:ENST00000355612:exon3:c.C645T:p.D215D	Score=535;Name=lod=200	NA	17q21.2	NA	Name=CTCF	NA	NA	rs17843020	0.1	0.1	0.093	0.108027	0.1581	0.0327	0.1484	0.0303	0.2106	0.16	0.04	0.14	0.04	0.1431	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.540288	NA	NA	0.156657	0.040626	NA	0.123	NA	7.2088096
931	11	6588228	6588228	G	A	exonic	DNHD1	NA	nonsynonymous SNV	DNHD1:NM_144666:exon36:c.G11489A:p.R3830H	exonic	ENSG00000179532	NA	nonsynonymous SNV	ENSG00000179532:ENST00000525080:exon2:c.G233A:p.R78H,ENSG00000179532:ENST00000527990:exon34:c.G11489A:p.R3830H,ENSG00000179532:ENST00000254579:exon36:c.G11489A:p.R3830H	NA	NA	11p15.4	NA	NA	Name=4	NA	rs10769699	0.28	0.28	0.267	0.233027	0.4095	0.2222	0.3098	0.0734	0.2239	0.4	0.26	0.33	0.06	0.3304	0.4	0.19	T	0.029	B	0.005	B	0.809	N	1.000	P	0.205	N	1.71	T	-0.908	T	0.000	T	0.174	0.689	7.681	-0.100	0.103	0.300	7.110	0.689026	NA	0.23	0.384698	0.110891	NA	0.217	NA	7.2087354
931	10	101716112	101716112	G	C	exonic	DNMBP	NA	nonsynonymous SNV	DNMBP:NM_015221:exon4:c.C1119G:p.N373K	exonic	ENSG00000107554	NA	nonsynonymous SNV	ENSG00000107554:ENST00000324109:exon4:c.C1119G:p.N373K,ENSG00000107554:ENST00000342239:exon4:c.C1119G:p.N373K	NA	NA	10q24.2	NA	NA	NA	NA	rs35924554	0.05	0.05	0.056	0.0495208	0.0398	0.0288	0.062	0.0893	0.0184	0.03	0.03	0.06	0.1	0.0452	0.1	0.89	T	0.049	B	0.016	B	0.095	N	1.000	P	0.55	N	2.85	T	-1.006	T	0.001	T	0.025	-0.096	3.528	-1.33	0.069	0.245	5.627	-0.096237	NA	0.93	0.04	0.076714	NA	0.036	NA	7.2083334
931	1	40149642	40149642	G	T	exonic	HPCAL4	NA	synonymous SNV	HPCAL4:NM_016257:exon3:c.C345A:p.R115R	exonic	ENSG00000116983	NA	synonymous SNV	ENSG00000116983:ENST00000372844:exon3:c.C345A:p.R115R	Score=735;Name=lod=1298	NA	1p34.2	Score=874;Name=V$MYCMAX_02	Name=ELF1_(SC-631)	Name=4	NA	rs784634	0.84	0.84	0.845	0.85623	0.825	0.8165	0.8256	0.9191	0.8661	0.81	0.81	0.86	0.9	0.8273	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.459296	1.459296	NA	0.806512	0.875795	ID=COSM426246;OCCURENCE=1(breast),1(large_intestine)	0.783	NA	7.2078546
931	16	71950450	71950450	C	T	exonic	IST1	NA	synonymous SNV	IST1:NM_001270975:exon3:c.C174T:p.H58H,IST1:NM_001270977:exon3:c.C174T:p.H58H,IST1:NM_014761:exon3:c.C174T:p.H58H,IST1:NM_001270976:exon4:c.C213T:p.H71H	exonic	ENSG00000182149,ENSG00000261750	NA	synonymous SNV	ENSG00000182149:ENST00000329908:exon3:c.C174T:p.H58H,ENSG00000182149:ENST00000378798:exon3:c.C174T:p.H58H,ENSG00000182149:ENST00000378799:exon3:c.C174T:p.H58H,ENSG00000182149:ENST00000424485:exon3:c.C174T:p.H58H,ENSG00000182149:ENST00000534994:exon3:c.C174T:p.H58H,ENSG00000182149:ENST00000535424:exon3:c.C213T:p.H71H,ENSG00000182149:ENST00000537613:exon3:c.C174T:p.H58H,ENSG00000182149:ENST00000539186:exon3:c.C174T:p.H58H,ENSG00000182149:ENST00000540296:exon4:c.C174T:p.H58H,ENSG00000182149:ENST00000541571:exon4:c.C174T:p.H58H,ENSG00000182149:ENST00000541918:exon4:c.C174T:p.H58H,ENSG00000261750:ENST00000568581:exon4:c.C174T:p.H58H,ENSG00000182149:ENST00000544564:exon5:c.C174T:p.H58H	Score=533;Name=lod=196	NA	16q22.2	Score=748;Name=V$STAT5A_02	NA	NA	NA	rs1049794	0.18	0.18	0.176	0.203674	0.1421	0.2708	0.1268	0.0809	0.4182	0.14	0.31	0.14	0.1	0.1787	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.137774	NA	NA	0.138721	0.067561	NA	0.13	NA	7.2071456
931	6	31525448	31525448	C	T	exonic	NFKBIL1	NA	synonymous SNV	NFKBIL1:NM_001144961:exon3:c.C378T:p.S126S,NFKBIL1:NM_001144962:exon3:c.C309T:p.S103S,NFKBIL1:NM_001144963:exon3:c.C309T:p.S103S,NFKBIL1:NM_005007:exon3:c.C378T:p.S126S	exonic	ENSG00000204498	NA	synonymous SNV	ENSG00000204498:ENST00000376145:exon3:c.C378T:p.S126S,ENSG00000204498:ENST00000376146:exon3:c.C309T:p.S103S,ENSG00000204498:ENST00000376148:exon3:c.C378T:p.S126S	Score=593;Name=lod=343	NA	6p21.33	NA	Name=YY1_(C-20)	NA	NA	rs2230365	0.14	0.14	0.141	0.141773	0.1372	0.2103	0.1225	0.0477	0.2168	0.14	0.23	0.14	0.05	0.169	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.849619	NA	NA	0.153721	0.06355	NA	0.21	NA	7.2067456
931	19	15586672	15586672	A	T	exonic	PGLYRP2	NA	nonsynonymous SNV	PGLYRP2:NM_052890:exon2:c.T809A:p.M270K	exonic	ENSG00000161031	NA	nonsynonymous SNV	ENSG00000161031:ENST00000292609:exon2:c.T809A:p.M270K,ENSG00000161031:ENST00000340880:exon2:c.T809A:p.M270K	NA	NA	19p13.12	NA	NA	NA	NA	rs892145	0.37	0.37	0.387	0.366214	0.3917	0.3631	0.3444	0.4077	0.3027	0.39	0.36	0.32	0.4	0.3594	0.4	0.34	T	0.137	B	0.104	B	0.584	N	1.000	P	1.95	M	3.69	T	-0.925	T	0.000	T	0.167	0.267	5.442	-1.07	-0.419	-0.159	12.759	0.266646	NA	0.23	0.376512	0.38788	ID=COSM1129966,COSM1129965;OCCURENCE=1(prostate),1(large_intestine)	0.464	NA	7.2057214
932	20	44644965	44644965	G	A	exonic	MMP9	NA	synonymous SNV	MMP9:NM_004994:exon13:c.G2082A:p.V694V	exonic	ENSG00000100985	NA	synonymous SNV	ENSG00000100985:ENST00000372330:exon13:c.G2082A:p.V694V	Score=472;Name=lod=111	NA	20q13.12	Score=854;Name=V$USF_01	NA	NA	NA	rs13925	0.16	0.16	0.153	0.165136	0.175	0.1637	0.0778	0.1392	0.2536	0.18	0.18	0.1	0.15	0.1489	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.247821	NA	NA	0.138023	0.149342	NA	0.116	NA	7.2047436
932	6	86199233	86199233	A	G	exonic	NT5E	NA	nonsynonymous SNV	NT5E:NM_001204813:exon6:c.A1126G:p.T376A,NT5E:NM_002526:exon6:c.A1126G:p.T376A	exonic	ENSG00000135318	NA	nonsynonymous SNV	ENSG00000135318:ENST00000257770:exon6:c.A1126G:p.T376A,ENSG00000135318:ENST00000369651:exon6:c.A1126G:p.T376A	Score=272;Name=lod=17	NA	6q14.3	Score=690;Name=V$BRACH_01	NA	NA	NA	rs2229523	0.76	0.76	0.753	0.793331	0.7028	0.5972	0.8401	0.9644	0.8241	0.71	0.6	0.84	0.95	0.734	0.95	0.31	T	0.0	B	0.001	B	0.169	N	0.000	P	-0.355	N	0.59	T	-1.010	T	0.018	T	0.202	0.121	4.651	-0.403	-0.825	-0.070	1.809	0.121107	NA	0.15	0.692442	0.924875	NA	0.877	NA	7.2040914
932	12	52938364	52938364	T	C	exonic	KRT71	NA	synonymous SNV	KRT71:NM_033448:exon9:c.A1524G:p.L508L	exonic	ENSG00000139648	NA	synonymous SNV	ENSG00000139648:ENST00000267119:exon9:c.A1524G:p.L508L	Score=317;Name=lod=26	NA	12q13.13	NA	Name=CTCF	Name=8	NA	rs2292507	0.39	0.39	0.341	0.327276	0.507	0.5	0.4712	0.028	0.2669	0.51	0.47	0.49	0.05	0.4416	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.217089	NA	NA	0.514302	0.10236	NA	0.384	NA	7.2037646
932	10	96076495	96076495	C	G	exonic	PLCE1	NA	synonymous SNV	PLCE1:NM_001165979:exon28:c.C5400G:p.V1800V,PLCE1:NM_016341:exon29:c.C6324G:p.V2108V	exonic	ENSG00000138193	NA	synonymous SNV	ENSG00000138193:ENST00000371375:exon28:c.C5400G:p.V1800V,ENSG00000138193:ENST00000371380:exon28:c.C6324G:p.V2108V,ENSG00000138193:ENST00000371385:exon28:c.C5400G:p.V1800V,ENSG00000138193:ENST00000260766:exon29:c.C6324G:p.V2108V	Score=537;Name=lod=203	NA	10q23.33	NA	NA	Name=4	NA	rs942676	0.09	0.09	0.067	0.0870607	0.1571	0.003	0.1873	0.0053	0.1411	0.17	0.0017	0.15	0.01	0.1456	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.450553	NA	NA	0.16054	0.028451	NA	0.087	NA	7.2034266
932	19	57760018	57760018	G	A	exonic	ZNF805	NA	nonsynonymous SNV	ZNF805:NM_001023563:exon3:c.G203A:p.G68E	exonic	ENSG00000204524	NA	nonsynonymous SNV	ENSG00000204524:ENST00000414468:exon3:c.G203A:p.G68E	NA	Name=Hyperactive-impulsive symptoms	19q13.43	NA	NA	NA	NA	rs2014572	0.39	0.39	0.371	0.368411	0.5746	0.1815	0.4496	0.2481	0.454	0.57	0.2	0.48	0.26	0.5375	0.57	0.33	T	0.682	P	0.154	B	.	.	1.000	P	1.14	L	5.57	T	-1.183	T	0.000	T	0.015	1.767	11.87	-0.004	-0.048	0.261	10.973	1.767179	1.767179	0.08	0.517913	0.276012	NA	0.391	NA	7.2033204
932	16	30021402	30021402	C	T	exonic	DOC2A	NA	nonsynonymous SNV	DOC2A:NM_003586:exon2:c.G142A:p.G48S	exonic	ENSG00000149927	NA	nonsynonymous SNV	ENSG00000149927:ENST00000350119:exon2:c.G142A:p.G48S,ENSG00000149927:ENST00000564979:exon2:c.G142A:p.G48S,ENSG00000149927:ENST00000565273:exon2:c.G142A:p.G48S,ENSG00000149927:ENST00000563378:exon3:c.G142A:p.G48S,ENSG00000149927:ENST00000564944:exon3:c.G142A:p.G48S	NA	NA	16p11.2	NA	Name=Egr-1	NA	NA	rs1140239	0.32	0.32	0.3	0.326078	0.3847	0.376	0.2954	0.1604	0.4601	0.38	0.36	0.32	0.16	0.368	0.38	0.95	T	0.002	B	0.001	B	0.446	N	1.000	P	0.345	N	0.14	T	-0.980	T	0.000	T	0.323	0.037	4.206	1.81	0.401	0.322	5.790	0.036904	NA	0.48	0.378734	0.162857	NA	0.261	NA	7.2018994
932	19	18376518	18376518	T	A	exonic	KIAA1683	NA	nonsynonymous SNV	KIAA1683:NM_001145304:exon3:c.A1832T:p.Q611L,KIAA1683:NM_001145305:exon3:c.A1694T:p.Q565L,KIAA1683:NM_025249:exon3:c.A1832T:p.Q611L	exonic	ENSG00000130518	NA	nonsynonymous SNV	ENSG00000130518:ENST00000392413:exon3:c.A1832T:p.Q611L,ENSG00000130518:ENST00000600328:exon3:c.A1832T:p.Q611L,ENSG00000130518:ENST00000600359:exon3:c.A1694T:p.Q565L	NA	NA	19p13.11	NA	NA	NA	NA	rs61740751	0.02	0.02	0.02	0.0157748	0.0427	0.001	0.0173	0.0045	0.0174	0.05	NA	0.02	NA	0.0351	0.054	0.28	T	0.447	B	0.177	B	0.368	N	1.000	N	1.525	L	3.85	T	-0.939	T	0.002	T	0.189	1.799	11.97	1.91	0.082	0.515	4.895	1.798598	1.798598	0.11	0.053837	0.011121	NA	0.007	NA	7.2016964
932	1	17550121	17550121	G	A	exonic	PADI1	NA	synonymous SNV	PADI1:NM_013358:exon3:c.G279A:p.R93R	exonic	ENSG00000142623	NA	synonymous SNV	ENSG00000142623:ENST00000375471:exon3:c.G279A:p.R93R	Score=300;Name=lod=22	NA	1p36.13	Score=889;Name=V$AREB6_01	NA	NA	NA	rs2293912	0.15	0.15	0.099	0.146765	0.1402	0.1567	0.3084	0.0477	0.1626	0.14	0.15	0.29	0.06	0.1662	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.450797	NA	NA	0.159767	0.054698	NA	0.101	NA	7.2004996
932	4	55152040	55152040	C	T	exonic	PDGFRA	NA	synonymous SNV	PDGFRA:NM_006206:exon18:c.C2472T:p.V824V	exonic	ENSG00000134853,ENSG00000145216	NA	synonymous SNV	ENSG00000134853:ENST00000257290:exon18:c.C2472T:p.V824V,ENSG00000145216:ENST00000507166:exon19:c.C1752T:p.V584V	Score=529;Name=lod=188	NA	4q12	Score=854;Name=V$CMYB_01	NA	NA	NA	rs2228230	0.21	0.21	0.212	0.240415	0.1451	0.1726	0.2767	0.3449	0.2413	0.15	0.17	0.23	0.32	0.182	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.386375	1.386375	NA	0.139302	0.313436	ID=COSM22413;OCCURENCE=2(central_nervous_system),1(endometrium),11(soft_tissue)	0.275	NA	7.2002646
932	11	100922202	100922202	G	A	exonic	PGR	NA	synonymous SNV	PGR:NM_001271161:exon4:c.C1512T:p.H504H,PGR:NM_000926:exon5:c.C2310T:p.H770H,PGR:NM_001202474:exon5:c.C1818T:p.H606H,PGR:NM_001271162:exon5:c.C528T:p.H176H	exonic	ENSG00000082175	NA	synonymous SNV	ENSG00000082175:ENST00000263463:exon4:c.C2004T:p.H668H,ENSG00000082175:ENST00000526300:exon4:c.C2004T:p.H668H,ENSG00000082175:ENST00000528960:exon4:c.C2193T:p.H731H,ENSG00000082175:ENST00000325455:exon5:c.C2310T:p.H770H,ENSG00000082175:ENST00000534013:exon5:c.C528T:p.H176H,ENSG00000082175:ENST00000534780:exon5:c.C2310T:p.H770H	Score=632;Name=lod=495	NA	11q22.1	Score=734;Name=V$SEF1_C	NA	NA	NA	rs1042839	0.1	0.1	0.085	0.0702875	0.1789	0.0099	0.1354	0.0061	0.0613	0.19	0.01	0.15	0.02	0.1242	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.096181	NA	NA	0.163605	0.029732	NA	0.101	NA	7.1999616
932	17	39274518	39274518	C	T	exonic	KRTAP4-11	NA	nonsynonymous SNV	KRTAP4-11:NM_033059:exon1:c.G50A:p.R17Q	exonic	ENSG00000212721	NA	nonsynonymous SNV	ENSG00000212721:ENST00000391413:exon1:c.G50A:p.R17Q	NA	NA	17q21.2	NA	NA	Name=9	NA	rs9897031	0.69	0.69	0.703	0.6877	0.7137	0.4306	0.6686	0.9622	0.5685	0.71	0.44	0.69	0.96	0.6982	0.96	0.7	T	0.0	B	0.0	B	0.912	N	1.000	P	-1.405	N	6.36	T	-1.048	T	0.000	T	0.051	-1.891	0.008	-0.215	-0.140	2.115	2.927	-1.890787	NA	1	0.721559	0.932081	NA	0.486	NA	7.1998744
932	11	18422487	18422487	C	A	exonic	LDHA	NA	synonymous SNV	LDHA:NM_001165414:exon4:c.C435A:p.I145I,LDHA:NM_001165415:exon4:c.C348A:p.I116I,LDHA:NM_001165416:exon4:c.C348A:p.I116I,LDHA:NM_005566:exon4:c.C348A:p.I116I	exonic	ENSG00000134333	NA	synonymous SNV	ENSG00000134333:ENST00000542179:exon3:c.C348A:p.I116I,ENSG00000134333:ENST00000227157:exon4:c.C348A:p.I116I,ENSG00000134333:ENST00000379412:exon4:c.C348A:p.I116I,ENSG00000134333:ENST00000396222:exon4:c.C348A:p.I116I,ENSG00000134333:ENST00000422447:exon4:c.C348A:p.I116I,ENSG00000134333:ENST00000478970:exon4:c.C348A:p.I116I,ENSG00000134333:ENST00000540430:exon4:c.C435A:p.I145I,ENSG00000134333:ENST00000543445:exon4:c.C348A:p.I116I	Score=682;Name=lod=787	NA	11p15.1	NA	Name=CTCF_(SC-5916)	NA	NA	rs6498	0.1	0.1	0.089	0.0974441	0.1521	0.0645	0.1527	0.0469	0.1043	0.14	0.05	0.15	0.06	0.1442	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.503499	1.503499	NA	0.17051	0.075716	NA	0.051	NA	7.1998566
932	5	133887780	133887780	G	A	exonic	PHF15	NA	synonymous SNV	PHF15:NM_015288:exon4:c.G192A:p.P64P	exonic	ENSG00000043143	NA	synonymous SNV	ENSG00000043143:ENST00000282605:exon4:c.G192A:p.P64P,ENSG00000043143:ENST00000361895:exon4:c.G192A:p.P64P,ENSG00000043143:ENST00000395003:exon4:c.G192A:p.P64P,ENSG00000043143:ENST00000402835:exon4:c.G192A:p.P64P,ENSG00000043143:ENST00000431355:exon4:c.G192A:p.P64P,ENSG00000043143:ENST00000512386:exon4:c.G192A:p.P64P	NA	NA	5q31.1	NA	Name=STAT3,AP-2alpha,AP-2gamma	Name=20	NA	rs12163993	0.14	0.14	0.114	0.157947	0.1571	0.2113	0.2147	0.0454	0.2157	0.16	0.18	0.18	0.06	0.1674	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.924582	NA	NA	0.142558	0.052429	NA	0.065	NA	7.1996086
932	11	124793682	124793682	T	C	exonic	HEPACAM	NA	nonsynonymous SNV	HEPACAM:NM_152722:exon3:c.A652G:p.M218V	exonic	ENSG00000165478	NA	nonsynonymous SNV	ENSG00000165478:ENST00000298251:exon3:c.A652G:p.M218V	Score=572;Name=lod=282	NA	11q24.2	NA	NA	NA	NA	rs10790715	0.78	0.78	0.794	0.79393	0.7177	0.9107	0.6398	0.8858	0.7372	0.71	0.91	0.63	0.87	0.7286	0.91	1	T	0.0	B	0.001	B	0.117	N	1.000	P	-0.18	N	2.73	T	-0.977	T	0.000	T	0.011	0.611	7.293	2.24	0.692	0.210	3.587	0.611459	NA	0.9	0.687485	0.877783	NA	0.746	NA	7.1995484
932	8	2037833	2037833	G	C	exonic	MYOM2	NA	synonymous SNV	MYOM2:NM_003970:exon15:c.G1647C:p.S549S	exonic	ENSG00000036448	NA	synonymous SNV	ENSG00000036448:ENST00000262113:exon15:c.G1647C:p.S549S	NA	NA	8p23.3	NA	Name=c-Myc,GATA-2,Max	Name=8	NA	rs2294061	0.22	0.22	0.224	0.224042	0.162	0.2083	0.1628	0.4244	0.0767	0.17	0.19	0.17	0.39	0.1592	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.97405	NA	NA	0.146163	0.379936	NA	0.188	NA	7.1993036
932	9	75545882	75545882	G	A	exonic	ALDH1A1	NA	synonymous SNV	ALDH1A1:NM_000689:exon3:c.C225T:p.S75S	exonic	ENSG00000165092	NA	synonymous SNV	ENSG00000165092:ENST00000297785:exon3:c.C225T:p.S75S,ENSG00000165092:ENST00000376939:exon3:c.C225T:p.S75S,ENSG00000165092:ENST00000419959:exon4:c.C225T:p.S75S,ENSG00000165092:ENST00000446946:exon4:c.C225T:p.S75S	Score=474;Name=lod=113	NA	9q21.13	NA	Name=Rad21,CTCF,GATA3_(SC-268),Pol2,FOXA1_(C-20),CTCF_(SC-5916)	Name=5	NA	rs13959	0.39	0.39	0.346	0.409345	0.503	0.4554	0.4885	0.1664	0.5378	0.5	0.39	0.44	0.18	0.4653	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.260667	1.260667	NA	0.499419	0.249887	NA	0.391	NA	7.1989476
932	10	53458047	53458047	A	G	exonic	CSTF2T	NA	synonymous SNV	CSTF2T:NM_015235:exon1:c.T1263C:p.R421R	exonic	ENSG00000177613	NA	synonymous SNV	ENSG00000177613:ENST00000331173:exon1:c.T1263C:p.R421R	Score=399;Name=lod=56	NA	10q21.1	NA	Name=ZNF263	NA	NA	rs3740228	0.24	0.24	0.247	0.2498	0.1551	0.2173	0.1196	0.4501	0.2025	0.15	0.24	0.13	0.46	0.1751	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.457204	NA	NA	0.138023	0.379256	ID=COSM146938;OCCURENCE=1(stomach)	0.283	NA	7.1984436
932	19	53086124	53086124	C	A	exonic	ZNF701	NA	nonsynonymous SNV	ZNF701:NM_018260:exon4:c.C812A:p.T271K,ZNF701:NM_001172655:exon5:c.C1010A:p.T337K	exonic	ENSG00000167562	NA	nonsynonymous SNV	ENSG00000167562:ENST00000391785:exon4:c.C812A:p.T271K,ENSG00000167562:ENST00000301093:exon5:c.C1010A:p.T337K,ENSG00000167562:ENST00000540331:exon5:c.C1010A:p.T337K	NA	NA	19q13.41	NA	NA	NA	NA	rs373554	0.65	0.65	0.636	0.64397	0.7117	0.497	0.6182	0.6687	0.7106	0.72	0.51	0.65	0.71	0.697	0.73	1	T	0.0	B	0.0	B	.	.	1.000	P	-1.405	N	2.33	T	-0.993	T	0.000	T	0.07	-2.082	0.006	-0.451	-0.996	-1.575	5.814	-2.082247	NA	1	0.726512	0.668861	NA	0.681	NA	7.1981214
932	19	36015652	36015652	C	T	exonic	SBSN	NA	synonymous SNV	SBSN:NM_001166034:exon3:c.G1710A:p.S570S,SBSN:NM_001166035:exon3:c.G447A:p.S149S,SBSN:NM_198538:exon4:c.G681A:p.S227S	exonic	ENSG00000189001	NA	synonymous SNV	ENSG00000189001:ENST00000452271:exon3:c.G1710A:p.S570S,ENSG00000189001:ENST00000588674:exon3:c.G387A:p.S129S,ENSG00000189001:ENST00000518157:exon4:c.G681A:p.S227S	Score=395;Name=lod=54	NA	19q13.12	Score=842;Name=V$FREAC2_01	NA	NA	NA	rs17705633	0.09	0.09	0.088	0.0998403	0.1581	0.0248	0.0951	0.0825	0.1442	0.15	0.02	0.11	0.08	0.1396	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.823794	NA	NA	0.17186	0.103949	NA	0.094	NA	7.1971066
932	1	22915753	22915753	T	C	exonic	EPHA8	NA	nonsynonymous SNV	EPHA8:NM_001006943:exon5:c.T1369C:p.S457P	exonic	ENSG00000070886	NA	nonsynonymous SNV	ENSG00000070886:ENST00000374644:exon5:c.T1369C:p.S457P,ENSG00000070886:ENST00000538803:exon6:c.T1369C:p.S457P	NA	NA	1p36.12	NA	NA	NA	NA	rs606002	0.43	0.43	0.453	0.481829	0.3777	0.2907	0.3761	0.7126	0.5491	0.38	0.29	0.39	0.69	0.4023	0.69	.	.	0.0	B	0.0	B	.	.	1.000	P	.	.	5.0	T	-1.109	T	0.000	T	0.026	0.642	7.448	-0.495	-0.528	-0.993	2.755	0.641996	NA	0	0.356628	0.654859	NA	0.507	NA	7.1967054
932	17	18565423	18565423	G	A	exonic	ZNF286B	NA	nonsynonymous SNV	ZNF286B:NM_001145045:exon5:c.C1396T:p.P466S	exonic	ENSG00000249459	NA	nonsynonymous SNV	ENSG00000249459:ENST00000545289:exon5:c.C1396T:p.P466S	Score=497;Name=lod=139	NA	17p11.2	NA	Name=KAP1,SETDB1,ZNF274	NA	NA	rs9912852	0.32	0.32	0.291	0.274561	0.4066	0.1935	0.4496	0.2027	0.1953	0.41	0.2	0.44	0.23	0.3395	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.582769	1.582769	NA	0.390635	0.240607	NA	0.406	NA	7.1965984
932	1	216258194	216258194	G	T	exonic	USH2A	NA	synonymous SNV	USH2A:NM_206933:exon25:c.C5013A:p.G1671G	exonic	ENSG00000042781	NA	synonymous SNV	ENSG00000042781:ENST00000307340:exon25:c.C5013A:p.G1671G,ENSG00000042781:ENST00000366943:exon25:c.C5013A:p.G1671G	Score=483;Name=lod=123	NA	1q41	NA	NA	NA	NA	rs56110889	0.12	0.12	0.111	0.105831	0.163	NA	0.0951	0.1906	0.0491	0.16	NA	0.11	0.2	0.1353	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.149787	NA	NA	0.172209	0.191557	NA	0.21	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=mult|single;CLNACC=RCV000041853.2|RCV000126247.1;CLNDSDB=.|.;CLNDSDBID=.|.	7.1961576
932	7	6732315	6732315	A	C	exonic	ZNF12	NA	nonsynonymous SNV	ZNF12:NM_006956:exon5:c.T258G:p.D86E,ZNF12:NM_016265:exon5:c.T258G:p.D86E	exonic	ENSG00000164631	NA	nonsynonymous SNV	ENSG00000164631:ENST00000404360:exon4:c.T150G:p.D50E,ENSG00000164631:ENST00000342651:exon5:c.T258G:p.D86E,ENSG00000164631:ENST00000405858:exon5:c.T258G:p.D86E	NA	NA	7p22.1	NA	NA	NA	NA	rs61227179	0.06	0.06	0.066	0.0658946	0.0348	0.001	0.0331	0.1884	0.0225	0.04	NA	0.03	0.19	0.0554	0.19	0.83	T	0.043	B	0.049	B	0.304	N	1.000	P	0.535	N	3.48	T	-0.932	T	0.000	T	0.024	0.604	7.256	1.77	0.221	0.737	2.906	0.604266	NA	0.06	0.047846	0.188601	NA	0.065	NA	7.1952874
933	19	49377873	49377873	G	A	exonic	PPP1R15A	NA	synonymous SNV	PPP1R15A:NM_014330:exon2:c.G1383A:p.L461L	exonic	ENSG00000087074	NA	synonymous SNV	ENSG00000087074:ENST00000200453:exon2:c.G1383A:p.L461L	NA	NA	19q13.33	NA	Name=Pol2,PU.1,FOSL1_(SC-183),eGFP-JunB,ZNF263,GATA-2,c-Fos,Egr-1	Name=93	NA	rs35023389	0.09	0.09	0.084	0.0836661	0.164	0.003	0.0793	0.0877	0.0818	0.16	0.0017	0.08	0.09	0.1281	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.335472	NA	NA	0.180116	0.130731	NA	0.138	NA	7.1944506
933	5	149008521	149008521	A	G	exonic	ARHGEF37	NA	nonsynonymous SNV	ARHGEF37:NM_001001669:exon12:c.A1810G:p.M604V	exonic	ENSG00000183111	NA	nonsynonymous SNV	ENSG00000183111:ENST00000333677:exon12:c.A1810G:p.M604V	NA	NA	5q32	NA	NA	NA	NA	rs1135093	0.72	0.72	0.733	0.69369	0.7227	0.8363	0.5548	0.6762	0.6391	0.73	0.84	0.62	0.65	0.6952	0.84	1	T	0.0	B	0.0	B	0.645	N	1.000	P	-0.41	N	-0.22	T	-0.962	T	0.000	T	0.022	-0.155	3.243	-3.51	-1.115	-0.573	13.533	-0.155034	NA	0.84	0.721617	0.686824	NA	0.739	NA	7.1938164
933	9	90501500	90501500	G	A	exonic	SPATA31E1	NA	nonsynonymous SNV	SPATA31E1:NM_178828:exon4:c.G2098A:p.G700R	exonic	ENSG00000177992	NA	nonsynonymous SNV	ENSG00000177992:ENST00000325643:exon4:c.G2098A:p.G700R	NA	NA	9q22.1	NA	NA	NA	NA	rs34017995	0.08	0.08	0.081	0.077476	0.0497	NA	0.036	0.2322	0.0061	0.05	NA	0.04	0.23	0.0467	0.23	0.74	T	0.202	B	0.014	B	0.008	N	1.000	P	-0.28	N	3.24	T	-0.960	T	0.000	T	0.042	-1.18	0.083	-1.14	-0.284	-0.316	5.425	-1.180499	NA	0.5	0.043498	0.182251	NA	0.094	NA	7.1934354
933	22	21337325	21337325	G	A	exonic	LZTR1	NA	synonymous SNV	LZTR1:NM_006767:exon2:c.G210A:p.K70K	exonic	ENSG00000099949	NA	nonsynonymous SNV	ENSG00000099949:ENST00000443265:exon2:c.G215A:p.S72N	Score=514;Name=lod=163	NA	22q11.21	NA	Name=Pol2	NA	NA	rs13054014	0.27	0.27	0.252	0.285144	0.2594	0.2014	0.3444	0.2443	0.411	0.27	0.18	0.33	0.31	0.285	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.970742	1.970742	0	0.262442	0.262143	NA	0.246	NA	7.193158
933	6	31237124	31237124	T	C	exonic	HLA-C	NA	nonsynonymous SNV	HLA-C:NM_001243042:exon7:c.A1087G:p.T363A,HLA-C:NM_002117:exon7:c.A1087G:p.T363A	exonic	ENSG00000204525	NA	nonsynonymous SNV	ENSG00000204525:ENST00000376228:exon7:c.A1087G:p.T363A,ENSG00000204525:ENST00000383329:exon7:c.A1105G:p.T369A	NA	NA	6p21.33	NA	Name=Pol2-4H8	NA	NA	rs1130838	0.78	0.78	0.763	0.785343	0.7266	0.8135	0.8184	0.8139	0.7546	0.72	0.81	0.8	0.82	0.7331	0.82	1	T	0.0	B	0.003	B	.	.	1.000	P	.	.	5.41	T	-0.991	T	0.000	T	0.205	-0.537	1.561	0.456	-0.161	-2.365	2.992	-0.536687	NA	1	0.687339	0.793377	NA	0.645	NA	7.1862944
933	1	12082926	12082926	A	G	exonic	MIIP	NA	nonsynonymous SNV	MIIP:NM_021933:exon4:c.A499G:p.K167E	exonic	ENSG00000116691	NA	nonsynonymous SNV	ENSG00000116691:ENST00000235332:exon4:c.A499G:p.K167E,ENSG00000116691:ENST00000436478:exon4:c.A499G:p.K167E	NA	NA	1p36.22	NA	Name=ZNF263	NA	NA	rs2295283	0.66	0.66	0.654	0.669329	0.7276	0.5516	0.598	0.795	0.6115	0.73	0.49	0.59	0.79	0.7058	0.79	1	T	0.0	B	0.0	B	0.201	N	1.000	P	-1.79	N	2.68	T	-1.010	T	0.000	T	0.016	-1.945	0.007	1.47	0.101	2.016	5.711	-1.945159	NA	0.99	0.714302	0.785066	NA	0.609	NA	7.1856314
934	11	5906205	5906205	G	A	exonic	OR52E4	NA	nonsynonymous SNV	OR52E4:NM_001005165:exon1:c.G683A:p.R228H	exonic	ENSG00000180974	NA	nonsynonymous SNV	ENSG00000180974:ENST00000316987:exon1:c.G683A:p.R228H	NA	NA	11p15.4	NA	NA	NA	NA	rs4757987	0.43	0.43	0.439	0.422324	0.3907	0.4613	0.3516	0.4894	0.3742	0.41	0.46	0.36	0.49	0.392	0.49	0.48	T	0.003	B	0.013	B	0.006	N	1.000	P	1.655	L	8.4	T	-1.082	T	0.000	T	0.02	0.431	6.342	0.047	0.078	-1.394	9.634	0.431134	NA	0.32	0.365689	0.473194	NA	0.457	NA	7.1849444
934	5	168233474	168233474	G	A	exonic	SLIT3	NA	synonymous SNV	SLIT3:NM_001271946:exon9:c.C912T:p.N304N,SLIT3:NM_003062:exon9:c.C912T:p.N304N	exonic	ENSG00000184347	NA	synonymous SNV	ENSG00000184347:ENST00000332966:exon9:c.C912T:p.N304N,ENSG00000184347:ENST00000404867:exon9:c.C912T:p.N304N,ENSG00000184347:ENST00000519560:exon9:c.C912T:p.N304N	Score=425;Name=lod=71	NA	5q34	Score=886;Name=V$NF1_Q6	NA	NA	NA	rs3797715	0.18	0.18	0.158	0.155551	0.173	0.2927	0.2032	0.0348	0.1258	0.17	0.28	0.2	0.04	0.1552	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.220573	NA	NA	0.153953	0.064231	NA	0.123	NA	7.1845136
934	12	6939850	6939850	A	G	exonic	LEPREL2	NA	unknown	UNKNOWN	exonic	ENSG00000110811	NA	nonsynonymous SNV	ENSG00000110811:ENST00000251761:exon4:c.A346G:p.T116A,ENSG00000110811:ENST00000396725:exon5:c.A898G:p.T300A	NA	NA	12p13.31	NA	NA	NA	NA	rs10744716	0.62	0.62	0.609	0.641573	0.4761	0.7073	0.6628	0.8154	0.4939	0.48	0.69	0.61	0.79	0.5375	0.79	0.04	D	0.07	B	0.024	B	0.293	N	1.000	P	.	.	1.23	T	-1.041	T	0.000	T	0.255	0.658	7.528	2.35	0.783	0.347	4.585	0.658171	NA	0.06	0.472621	0.750981	NA	0.645	NA	7.1804457
934	19	15587345	15587345	T	C	exonic	PGLYRP2	NA	nonsynonymous SNV	PGLYRP2:NM_052890:exon2:c.A136G:p.T46A	exonic	ENSG00000161031	NA	nonsynonymous SNV	ENSG00000161031:ENST00000292609:exon2:c.A136G:p.T46A,ENSG00000161031:ENST00000340880:exon2:c.A136G:p.T46A,ENSG00000161031:ENST00000594637:exon3:c.A136G:p.T46A,ENSG00000161031:ENST00000601792:exon4:c.A136G:p.T46A	NA	NA	19p13.12	NA	NA	NA	NA	rs3813135	0.36	0.36	0.362	0.351837	0.4046	0.3651	0.3429	0.3457	0.2986	0.4	0.37	0.31	0.33	0.3646	0.4	1	T	0.0	B	0.0	B	0.857	N	1.000	P	-2.2	N	3.94	T	-0.925	T	0.000	T	0.013	-1.115	0.13	2.05	0.570	-0.075	6.141	-1.115003	NA	1	0.384884	0.343168	ID=COSM148524,COSM148523;OCCURENCE=1(stomach)	0.464	NA	7.1792494
934	12	52681437	52681437	A	G	exonic	KRT81	NA	synonymous SNV	KRT81:NM_002281:exon6:c.T969C:p.N323N	exonic	ENSG00000205426	NA	synonymous SNV	ENSG00000205426:ENST00000327741:exon6:c.T969C:p.N323N	Score=601;Name=lod=369	NA	12q13.13	Score=940;Name=V$CDPCR3HD_01	Name=Pol2	NA	NA	rs3187034	0.33	0.33	0.296	0.420527	0.5169	0.1577	0.3761	0.5688	0.4233	0.41	0.14	0.33	0.43	0.4619	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.479922	1.479922	NA	0.508958	0.575125	ID=COSM147519;OCCURENCE=1(stomach)	0.493	NA	7.1789086
934	15	63932513	63932513	G	C	exonic	HERC1	NA	synonymous SNV	HERC1:NM_003922:exon61:c.C11739G:p.L3913L	exonic	ENSG00000103657	NA	synonymous SNV	ENSG00000103657:ENST00000443617:exon61:c.C11739G:p.L3913L	Score=419;Name=lod=67	NA	15q22.31	Score=809;Name=V$ARP1_01	NA	Name=3	NA	rs2228517	0.32	0.32	0.288	0.321486	0.5268	0.0764	0.428	0.3056	0.3088	0.49	0.08	0.42	0.29	0.4304	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.777765	NA	NA	0.530709	0.329446	ID=COSM147937;OCCURENCE=1(stomach)	0.326	NA	7.1787576
934	9	96238578	96238578	C	T	exonic	FAM120A	NA	synonymous SNV	FAM120A:NM_014612:exon3:c.C762T:p.H254H	exonic	ENSG00000048828	NA	synonymous SNV	ENSG00000048828:ENST00000277165:exon3:c.C762T:p.H254H,ENSG00000048828:ENST00000333936:exon3:c.C762T:p.H254H,ENSG00000048828:ENST00000340893:exon3:c.C762T:p.H254H,ENSG00000048828:ENST00000375389:exon3:c.C762T:p.H254H,ENSG00000048828:ENST00000446420:exon3:c.C294T:p.H98H	Score=661;Name=lod=649	NA	9q22.31	NA	NA	NA	NA	rs10821135	0.59	0.59	0.58	0.524561	0.498	0.5972	0.5591	0.6838	0.2372	0.5	0.62	0.59	0.67	0.4968	0.67	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.959	T	0.000	T	.	1.092	9.458	-1.38	-0.707	1.012	11.901	1.092407	NA	NA	0.493953	0.659328	ID=COSM150634;OCCURENCE=1(stomach)	0.42	NA	7.1779136
934	6	42232475	42232475	G	A	exonic	TRERF1	NA	synonymous SNV	TRERF1:NM_033502:exon7:c.C1602T:p.H534H	exonic	ENSG00000124496	NA	synonymous SNV	ENSG00000124496:ENST00000340840:exon6:c.C1602T:p.H534H,ENSG00000124496:ENST00000354325:exon6:c.C1602T:p.H534H,ENSG00000124496:ENST00000372917:exon7:c.C1602T:p.H534H,ENSG00000124496:ENST00000372922:exon7:c.C1602T:p.H534H,ENSG00000124496:ENST00000541110:exon7:c.C1602T:p.H534H	Score=545;Name=lod=218	NA	6p21.1	Score=906;Name=V$USF_Q6	NA	NA	NA	rs2295274	0.14	0.14	0.144	0.150559	0.169	0.122	0.1066	0.1362	0.2117	0.17	0.13	0.12	0.13	0.1556	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.972457	NA	NA	0.164302	0.153654	NA	0.152	NA	7.1777646
934	2	171242761	171242761	G	A	exonic	MYO3B	NA	synonymous SNV	MYO3B:NM_001083615:exon13:c.G1353A:p.Q451Q,MYO3B:NM_138995:exon13:c.G1353A:p.Q451Q	exonic	ENSG00000071909	NA	synonymous SNV	ENSG00000071909:ENST00000317935:exon13:c.G1353A:p.Q451Q,ENSG00000071909:ENST00000334231:exon13:c.G1380A:p.Q460Q,ENSG00000071909:ENST00000408978:exon13:c.G1353A:p.Q451Q,ENSG00000071909:ENST00000409044:exon13:c.G1353A:p.Q451Q,ENSG00000071909:ENST00000484338:exon13:c.G1380A:p.Q460Q	Score=584;Name=lod=315	NA	2q31.1	Score=834;Name=V$NFY_C	NA	NA	NA	rs17497636	0.1	0.1	0.085	0.113618	0.162	0.0794	0.0965	0.0461	0.2025	0.17	0.05	0.11	0.03	0.1555	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.065094	NA	NA	0.171773	0.058415	NA	0.072	NA	7.1773936
934	19	55019371	55019371	C	G	exonic	LAIR2	NA	nonsynonymous SNV	LAIR2:NM_002288:exon3:c.C336G:p.H112Q,LAIR2:NM_021270:exon3:c.C336G:p.H112Q	exonic	ENSG00000167618	NA	nonsynonymous SNV	ENSG00000167618:ENST00000301202:exon3:c.C336G:p.H112Q,ENSG00000167618:ENST00000351841:exon3:c.C336G:p.H112Q	NA	NA	19q13.42	NA	NA	NA	NA	rs61737870	0.09	0.09	0.07	0.0970447	0.0547	0.0079	0.0749	0.2405	0.0542	0.05	0.01	0.1	0.22	0.0543	0.22	.	.	0.005	B	0.007	B	0.211	N	1.000	P	0.955	L	2.87	T	-0.937	T	0.000	T	0.021	0.437	6.372	-1.47	-0.256	0.010	2.993	0.436742	NA	0.44	0.047093	0.219246	NA	0.065	NA	7.1772404
934	18	21148863	21148863	A	G	exonic	NPC1	NA	synonymous SNV	NPC1:NM_000271:exon4:c.T387C:p.Y129Y	exonic	ENSG00000141458	NA	synonymous SNV	ENSG00000141458:ENST00000269228:exon4:c.T387C:p.Y129Y	NA	NA	18q11.2	NA	NA	Name=15	NA	rs12970899	0.1	0.1	0.094	0.109824	0.1779	0.0268	0.1009	0.0537	0.2076	0.18	0.01	0.13	0.06	0.1444	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.943932	NA	NA	0.167326	0.081026	NA	0.058	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117827.2;CLNDSDB=.;CLNDSDBID=.	7.1770406
934	15	52611451	52611451	A	G	exonic	MYO5A	NA	synonymous SNV	MYO5A:NM_001142495:exon37:c.T4884C:p.D1628D,MYO5A:NM_000259:exon38:c.T4965C:p.D1655D	exonic	ENSG00000197535	NA	synonymous SNV	ENSG00000197535:ENST00000399229:exon9:c.T1155C:p.D385D,ENSG00000197535:ENST00000356338:exon37:c.T4884C:p.D1628D,ENSG00000197535:ENST00000399233:exon37:c.T4956C:p.D1652D,ENSG00000197535:ENST00000399231:exon38:c.T4965C:p.D1655D,ENSG00000197535:ENST00000553916:exon38:c.T4959C:p.D1653D,ENSG00000197535:ENST00000358212:exon39:c.T5040C:p.D1680D	NA	NA	15q21.2	NA	Name=Pol2	Name=4	NA	rs2290332	0.29	0.29	0.276	0.328674	0.1163	0.5774	0.2939	0.2867	0.3722	0.13	0.54	0.24	0.28	0.2259	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.097069	NA	NA	0.148049	0.250805	NA	0.275	NA	7.1764176
934	22	20131115	20131115	C	T	exonic	ZDHHC8	NA	synonymous SNV	ZDHHC8:NM_001185024:exon10:c.C1962T:p.N654N,ZDHHC8:NM_013373:exon10:c.C1962T:p.N654N	exonic	ENSG00000099904	NA	synonymous SNV	ENSG00000099904:ENST00000320602:exon8:c.C1686T:p.N562N,ENSG00000099904:ENST00000334554:exon10:c.C1962T:p.N654N,ENSG00000099904:ENST00000405930:exon10:c.C1962T:p.N654N	Score=525;Name=lod=181	NA	22q11.21	Score=796;Name=V$OLF1_01	NA	NA	NA	rs9605069	0.08	0.08	0.07	0.0830671	0.168	0.004	0.1037	0.0045	0.1687	0.16	0.0035	0.12	0.01	0.1464	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.833604	NA	NA	0.176334	0.030234	NA	0.029	NA	7.1759326
934	15	58860963	58860963	C	A	exonic	LIPC	NA	synonymous SNV	LIPC:NM_000236:exon9:c.C1437A:p.T479T	exonic	ENSG00000166035	NA	synonymous SNV	ENSG00000166035:ENST00000433326:exon8:c.C1254A:p.T418T,ENSG00000166035:ENST00000299022:exon9:c.C1437A:p.T479T,ENSG00000166035:ENST00000356113:exon11:c.C1437A:p.T479T	Score=456;Name=lod=95	NA	15q21.3	Score=895;Name=V$CP2_01	NA	NA	NA	rs6074	0.17	0.17	0.151	0.201478	0.1561	0.249	0.196	0.0817	0.365	0.17	0.26	0.16	0.09	0.1927	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.123206	NA	NA	0.142125	0.09854	NA	0.116	NA	7.1757416
934	2	209007559	209007559	T	G	exonic	CRYGB	NA	nonsynonymous SNV	CRYGB:NM_005210:exon3:c.A331C:p.I111L	exonic	ENSG00000182187	NA	nonsynonymous SNV	ENSG00000182187:ENST00000260988:exon3:c.A331C:p.I111L	Score=449;Name=lod=89	NA	2q34	NA	NA	Name=5	NA	rs796287	0.63	0.63	0.644	0.644569	0.7326	0.5952	0.5447	0.6203	0.7086	0.72	0.55	0.57	0.65	0.6885	0.74	0.06	T	0.0	B	0.0	B	0.031	N	1.000	P	-0.77	N	-0.95	T	-0.932	T	0.000	T	0.019	1.474	10.87	0.468	-0.247	0.827	9.465	1.474126	1.474126	0.1	0.736512	0.675897	NA	0.688	NA	7.1757214
934	17	21319272	21319272	C	T	exonic	KCNJ12,KCNJ18	NA	synonymous SNV	KCNJ18:NM_001194958:exon3:c.C618T:p.D206D,KCNJ12:NM_021012:exon3:c.C618T:p.D206D	exonic	ENSG00000184185	NA	synonymous SNV	ENSG00000184185:ENST00000331718:exon3:c.C618T:p.D206D,ENSG00000184185:ENST00000583088:exon3:c.C618T:p.D206D	Score=591;Name=lod=336	NA	17p11.2	Score=913;Name=V$CREB_01	NA	NA	NA	rs73313926	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.4916	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.058828	NA	NA	NA	NA	NA	0.159	NA	7.1750666
935	7	5347914	5347914	G	A	exonic	TNRC18	NA	synonymous SNV	TNRC18:NM_001080495:exon30:c.C8730T:p.D2910D	exonic	ENSG00000182095	NA	synonymous SNV	ENSG00000182095:ENST00000399537:exon30:c.C8730T:p.D2910D,ENSG00000182095:ENST00000430969:exon30:c.C8730T:p.D2910D	Score=702;Name=lod=949	NA	7p22.1	Score=878;Name=V$MYCMAX_02	NA	NA	NA	rs11554710	0.14	0.14	0.108	0.103035	0.1521	0.0982	0.1758	0.0477	0.0808	0.16	0.13	0.2	0.06	0.1662	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.316541	NA	NA	0.17337	0.060584	ID=COSM150228,COSM1451422;OCCURENCE=1(stomach),1(large_intestine)	0.087	NA	7.1749966
935	7	73470714	73470714	G	A	exonic	ELN	NA	nonsynonymous SNV	ELN:NM_001081752:exon19:c.G1234A:p.G412S,ELN:NM_000501:exon20:c.G1264A:p.G422S,ELN:NM_001081753:exon20:c.G1279A:p.G427S,ELN:NM_001081754:exon20:c.G1279A:p.G427S,ELN:NM_001081755:exon20:c.G1264A:p.G422S	exonic	ENSG00000049540	NA	nonsynonymous SNV	ENSG00000049540:ENST00000380553:exon14:c.G913A:p.G305S,ENSG00000049540:ENST00000380575:exon19:c.G1234A:p.G412S,ENSG00000049540:ENST00000380584:exon19:c.G1222A:p.G408S,ENSG00000049540:ENST00000414324:exon19:c.G1249A:p.G417S,ENSG00000049540:ENST00000458204:exon19:c.G1234A:p.G412S,ENSG00000049540:ENST00000252034:exon20:c.G1264A:p.G422S,ENSG00000049540:ENST00000320399:exon20:c.G1264A:p.G422S,ENSG00000049540:ENST00000357036:exon20:c.G1279A:p.G427S,ENSG00000049540:ENST00000358929:exon20:c.G1264A:p.G422S,ENSG00000049540:ENST00000380562:exon20:c.G1264A:p.G422S,ENSG00000049540:ENST00000380576:exon20:c.G1264A:p.G422S,ENSG00000049540:ENST00000429192:exon20:c.G1279A:p.G427S,ENSG00000049540:ENST00000445912:exon20:c.G1264A:p.G422S	NA	NA	7q11.23	NA	NA	NA	NA	rs2071307	0.26	0.26	0.243	0.220447	0.4205	0.1081	0.2464	0.1339	0.229	0.39	0.14	0.3	0.15	0.3262	0.41	0.09	T	0.012	B	0.002	B	.	.	1.000	P	.	.	1.38	T	-0.976	T	0.000	T	0.064	1.344	10.41	1.2	-0.267	0.532	7.391	1.343509	1.343509	0.31	0.412907	0.176804	ID=COSM150313;OCCURENCE=1(stomach)	0.232	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000036524.1;CLNDSDB=.;CLNDSDBID=.	7.1737264
935	17	78171944	78171944	G	C	exonic	CARD14	NA	nonsynonymous SNV	CARD14:NM_052819:exon9:c.G930C:p.R310S,CARD14:NM_001257970:exon12:c.G1641C:p.R547S,CARD14:NM_024110:exon12:c.G1641C:p.R547S	exonic	ENSG00000141527	NA	nonsynonymous SNV	ENSG00000141527:ENST00000392434:exon9:c.G930C:p.R310S,ENSG00000141527:ENST00000344227:exon12:c.G1641C:p.R547S,ENSG00000141527:ENST00000570421:exon12:c.G1641C:p.R547S,ENSG00000141527:ENST00000573882:exon14:c.G1641C:p.R547S	NA	NA	17q25.3	NA	NA	Name=15	NA	rs2066964	0.39	0.39	0.41	0.370208	0.4006	0.4554	0.2435	0.3079	0.4254	0.4	0.51	0.27	0.32	0.3772	0.51	0.9	T	0.001	B	0.0	B	0.839	N	1.000	P	-1.5	N	2.46	T	-0.922	T	0.000	T	0.326	-1.788	0.01	0.71	-0.043	0.149	6.680	-1.787786	NA	0.84	0.382791	0.312982	ID=COSM1387026,COSM1387027;OCCURENCE=1(large_intestine)	0.442	NA	7.1727424
935	20	61460124	61460124	G	A	exonic	COL9A3	NA	synonymous SNV	COL9A3:NM_001853:exon18:c.G909A:p.P303P	exonic	ENSG00000092758	NA	synonymous SNV	ENSG00000092758:ENST00000343916:exon18:c.G909A:p.P303P	Score=463;Name=lod=102	NA	20q13.33	Score=982;Name=V$P53_02	NA	NA	NA	rs2249903	0.1	0.1	0.092	0.0842652	0.1889	0.0308	0.1167	0.0363	0.0736	0.19	0.03	0.14	0.04	0.1316	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.821465	NA	NA	0.175273	0.062699	NA	0.058	NA	7.1708936
935	2	152322095	152322095	A	T	exonic	RIF1	NA	nonsynonymous SNV	RIF1:NM_001177665:exon29:c.A6061T:p.N2021Y,RIF1:NM_001177663:exon30:c.A6061T:p.N2021Y,RIF1:NM_001177664:exon30:c.A6061T:p.N2021Y,RIF1:NM_018151:exon30:c.A6061T:p.N2021Y	exonic	ENSG00000080345	NA	nonsynonymous SNV	ENSG00000080345:ENST00000243326:exon29:c.A6061T:p.N2021Y,ENSG00000080345:ENST00000430328:exon29:c.A6061T:p.N2021Y,ENSG00000080345:ENST00000428287:exon30:c.A6061T:p.N2021Y,ENSG00000080345:ENST00000444746:exon30:c.A6061T:p.N2021Y,ENSG00000080345:ENST00000453091:exon30:c.A6061T:p.N2021Y	NA	NA	2q23.3	NA	NA	NA	NA	rs2444257	0.72	0.72	0.704	0.659545	0.7276	0.7619	0.7392	0.5802	0.5348	0.72	0.8	0.75	0.63	0.7067	0.8	0.41	T	0.0	B	0.0	B	0.036	N	1.000	P	-0.345	N	3.02	T	-1.008	T	0.000	T	0.261	-1.34	0.03	-2.42	-0.792	-1.094	1.284	-1.339846	NA	1	0.728953	0.593736	NA	0.783	NA	7.1700804
935	1	43886494	43886494	C	T	exonic	SZT2	NA	nonsynonymous SNV	SZT2:NM_015284:exon10:c.C1336T:p.P446S	exonic	ENSG00000198198	NA	nonsynonymous SNV	ENSG00000198198:ENST00000562955:exon10:c.C1336T:p.P446S	Score=454;Name=lod=93	NA	1p34.2	Score=843;Name=V$RFX1_02	NA	NA	NA	rs2782643	0.26	0.26	0.237	0.198083	0.4205	0.0823	0.379	0.0998	0.093	0.42	0.08	0.41	0.12	0.3191	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.046621	3.046621	NA	0.423656	0.146119	NA	0.333	NA	7.1700774
935	1	183616926	183616926	T	C	exonic	APOBEC4	NA	nonsynonymous SNV	APOBEC4:NM_203454:exon2:c.A991G:p.K331E	exonic	ENSG00000173627	NA	nonsynonymous SNV	ENSG00000173627:ENST00000308641:exon2:c.A991G:p.K331E	NA	NA	1q25.3	NA	NA	Name=3	NA	rs1174657	0.36	0.36	0.352	0.370208	0.4006	0.244	0.3473	0.4932	0.319	0.4	0.19	0.39	0.48	0.3679	0.48	0.84	T	0.0	B	0.001	B	0.753	N	1.000	P	0.895	L	2.59	T	-0.922	T	0.000	T	0.016	-1.279	0.043	-0.467	-0.238	0.073	6.984	-1.278574	NA	NA	0.395465	0.46936	NA	0.42	NA	7.1693684
935	12	80014907	80014907	A	T	exonic	PAWR	NA	synonymous SNV	PAWR:NM_002583:exon3:c.T597A:p.I199I	exonic	ENSG00000177425	NA	synonymous SNV	ENSG00000177425:ENST00000328827:exon3:c.T597A:p.I199I	Score=423;Name=lod=70	NA	12q21.2	NA	NA	NA	NA	rs2307223	NA	NA	0.374	0.516773	0.8171	0.5139	0.7363	0.1475	0.5542	NA	NA	NA	NA	0.6951	0.99	.	.	.	.	.	.	.	.	1.000	D	.	.	.	.	-0.983	T	0.000	T	.	-1.711	0.011	4.62	0.798	0.076	5.551	-1.710624	NA	NA	0.985116	0.34453	NA	0.514	NA	7.1693506
935	12	6715593	6715593	A	G	UTR5	CHD4	NM_001273:c.-54T>C	NA	NA	UTR5	ENSG00000111642	ENST00000357008:c.-54T>C,ENST00000309577:c.-54T>C,ENST00000544040:c.-54T>C,ENST00000544484:c.-54T>C,ENST00000545942:c.-54T>C,ENST00000545584:c.-54T>C	NA	NA	Score=623;Name=lod=453	NA	12p13.31	NA	Name=Pol2,GR,Egr-1,Sin3Ak-20	Name=88	NA	rs1734116	0.29	0.29	0.31	0.319489	0.164	0.2927	0.1499	0.6067	0.2393	0.17	0.3	0.15	0.59	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.471796	1.471796	NA	NA	NA	NA	0.21	NA	7.1693334
935	20	25288632	25288632	G	A	exonic	ABHD12	NA	synonymous SNV	ABHD12:NM_001042472:exon9:c.C837T:p.R279R,ABHD12:NM_015600:exon9:c.C837T:p.R279R	exonic	ENSG00000100997	NA	synonymous SNV	ENSG00000100997:ENST00000576316:exon3:c.C141T:p.R47R,ENSG00000100997:ENST00000339157:exon9:c.C837T:p.R279R,ENSG00000100997:ENST00000376542:exon9:c.C837T:p.R279R,ENSG00000100997:ENST00000491682:exon9:c.C366T:p.R122R	NA	NA	20p11.21	NA	Name=PU.1	Name=5	NA	rs6107027	0.33	0.33	0.291	0.336062	0.5089	0.0228	0.5836	0.211	0.4744	0.51	0.02	0.57	0.23	0.4696	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.109086	NA	NA	0.519767	0.268498	NA	0.442	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116215.2;CLNDSDB=.;CLNDSDBID=.	7.1683996
935	12	112431212	112431212	T	C	intronic	TMEM116	NA	NA	NA	ncRNA_exonic	ENSG00000258373	NA	NA	NA	Score=674;Name=lod=732	NA	12q24.13	NA	Name=FOXA1_(C-20),p300,GATA3_(SC-268),GATA-1	Name=3	NA	rs57646770	0.23	0.23	0.227	0.229034	0.165	0.2708	0.1398	0.3275	0.182	0.16	0.27	0.16	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.441949	1.441949	NA	NA	NA	NA	0.283	NA	7.1683333
935	11	60785463	60785463	C	T	exonic	CD6	NA	synonymous SNV	CD6:NM_001254750:exon10:c.C1719T:p.A573A,CD6:NM_001254751:exon10:c.C1692T:p.A564A,CD6:NM_006725:exon11:c.C1815T:p.A605A	exonic	ENSG00000013725	NA	synonymous SNV	ENSG00000013725:ENST00000346437:exon9:c.C1596T:p.A532A,ENSG00000013725:ENST00000344028:exon10:c.C1719T:p.A573A,ENSG00000013725:ENST00000352009:exon10:c.C1719T:p.A573A,ENSG00000013725:ENST00000452451:exon10:c.C1692T:p.A564A,ENSG00000013725:ENST00000313421:exon11:c.C1815T:p.A605A	Score=361;Name=lod=39	NA	11q12.2	Score=738;Name=V$MYOGNF1_01	NA	NA	NA	rs12417503	0.11	0.11	0.087	0.0890575	0.1958	0.001	0.1239	0.0832	0.0532	0.2	0.0017	0.14	0.08	0.136	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.147163	NA	NA	0.166667	0.096635	NA	0.167	NA	7.1681996
935	8	39873053	39873053	G	A	exonic	IDO2	NA	nonsynonymous SNV	IDO2:NM_194294:exon11:c.G1195A:p.A399T	exonic	ENSG00000188676	NA	nonsynonymous SNV	ENSG00000188676:ENST00000389060:exon10:c.G1156A:p.A386T,ENSG00000188676:ENST00000502986:exon11:c.G1195A:p.A399T	NA	NA	8p11.21	NA	NA	NA	NA	rs72632016	0.08	0.08	0.079	0.0804712	0.0527	0.0119	0.0634	0.1884	0.046	0.05	0.02	0.07	0.19	0.0605	0.19	.	.	0.025	B	0.008	B	0.348	N	1.000	P	1.83	L	0.88	T	-1.046	T	0.000	T	0.045	-0.356	2.319	1.1	-0.080	-0.312	1.115	-0.355979	NA	NA	0.05194	0.181218	NA	0.109	NA	7.1681934
935	17	21318897	21318897	G	C	exonic	KCNJ12,KCNJ18	NA	synonymous SNV	KCNJ18:NM_001194958:exon3:c.G243C:p.R81R,KCNJ12:NM_021012:exon3:c.G243C:p.R81R	exonic	ENSG00000184185	NA	synonymous SNV	ENSG00000184185:ENST00000331718:exon3:c.G243C:p.R81R,ENSG00000184185:ENST00000583088:exon3:c.G243C:p.R81R	Score=565;Name=lod=263	NA	17p11.2	NA	Name=NRSF	NA	NA	rs1657739	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.4993	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.559538	NA	NA	NA	NA	NA	0.188	NA	7.1673666
935	6	57467093	57467093	A	G	exonic	PRIM2	NA	unknown	UNKNOWN	exonic	ENSG00000146143	NA	nonsynonymous SNV	ENSG00000146143:ENST00000607273:exon11:c.A1034G:p.Y345C	Score=531;Name=lod=191	NA	6p11.2	Score=777;Name=V$MEF2_01	NA	NA	NA	rs9885916	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4994	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.212181	2.212181	NA	NA	NA	ID=COSM150113;OCCURENCE=1(stomach)	0.449	NA	7.1672667
935	2	238267717	238267717	C	T	exonic	COL6A3	NA	synonymous SNV	COL6A3:NM_057166:exon17:c.G4548A:p.L1516L,COL6A3:NM_057167:exon19:c.G5751A:p.L1917L,COL6A3:NM_004369:exon20:c.G6369A:p.L2123L	exonic	ENSG00000163359	NA	synonymous SNV	ENSG00000163359:ENST00000472056:exon17:c.G4548A:p.L1516L,ENSG00000163359:ENST00000409809:exon18:c.G5751A:p.L1917L,ENSG00000163359:ENST00000346358:exon19:c.G5769A:p.L1923L,ENSG00000163359:ENST00000347401:exon19:c.G5766A:p.L1922L,ENSG00000163359:ENST00000353578:exon19:c.G5751A:p.L1917L,ENSG00000163359:ENST00000295550:exon20:c.G6369A:p.L2123L	Score=284;Name=lod=19	NA	2q37.3	NA	NA	NA	NA	rs2646254	0.3	0.3	0.304	0.330871	0.1511	0.3522	0.2507	0.5416	0.2658	0.14	0.33	0.24	0.53	0.2129	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.788991	NA	NA	0.135814	0.470495	NA	0.333	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000080967.2;CLNDSDB=.;CLNDSDBID=.	7.1668526
935	17	21216846	21216846	G	C	exonic	MAP2K3	NA	synonymous SNV	MAP2K3:NM_002756:exon11:c.G870C:p.L290L,MAP2K3:NM_145109:exon11:c.G957C:p.L319L	exonic	ENSG00000034152	NA	synonymous SNV	ENSG00000034152:ENST00000527123:exon2:c.G183C:p.L61L,ENSG00000034152:ENST00000342679:exon11:c.G957C:p.L319L,ENSG00000034152:ENST00000361818:exon11:c.G870C:p.L290L,ENSG00000034152:ENST00000316920:exon12:c.G870C:p.L290L	Score=527;Name=lod=184	NA	17p11.2	Score=947;Name=V$GATA1_01	NA	NA	NA	rs1657688	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.4999	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.778914	NA	NA	NA	NA	ID=COSM291821;OCCURENCE=1(large_intestine)	0.5	NA	7.1667666
935	20	31656632	31656632	C	G	exonic	BPIFB3	NA	nonsynonymous SNV	BPIFB3:NM_182658:exon10:c.C1002G:p.H334Q	exonic	ENSG00000186190	NA	nonsynonymous SNV	ENSG00000186190:ENST00000375494:exon10:c.C1002G:p.H334Q	NA	NA	20q11.21	NA	NA	NA	NA	rs6057717	0.48	0.48	0.464	0.482029	0.3837	0.7698	0.4741	0.3086	0.5266	0.38	0.77	0.44	0.33	0.4197	0.77	0.58	T	0.155	B	0.107	B	0.087	N	1.000	P	0.69	N	3.12	T	-1.005	T	0.000	T	0.047	-0.364	2.285	2.26	0.519	0.094	6.123	-0.363791	NA	0.2	0.363256	0.296641	ID=COSM443651;OCCURENCE=1(breast)	0.42	NA	7.1666774
935	6	57244780	57244780	G	A	exonic	PRIM2	NA	unknown	UNKNOWN	exonic	ENSG00000146143	NA	nonsynonymous SNV	ENSG00000146143:ENST00000607273:exon6:c.G541A:p.E181K	Score=395;Name=lod=54	NA	6p11.2	Score=766;Name=V$PAX4_04	NA	NA	NA	rs5011403	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.156905	2.156905	0.76	NA	NA	NA	0.493	NA	7.1666667
935	6	57467175	57467175	A	G	exonic	PRIM2	NA	unknown	UNKNOWN	UTR3	ENSG00000146143	ENST00000607273:c.*75A>G	NA	NA	Score=645;Name=lod=556	NA	6p11.2	Score=843;Name=V$EVI1_04	NA	Name=40	NA	rs4406234	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.283696	1.283696	NA	NA	NA	NA	0.464	NA	7.1666667
935	19	49535393	49535393	G	C	intronic	CGB2	NA	NA	NA	UTR5	ENSG00000104818	ENST00000474913:c.-395G>C	NA	NA	NA	NA	19q13.33	Score=876;Name=V$YY1_01	Name=CTCF,NF-YB	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.176988	NA	NA	NA	NA	NA	NA	NA	7.1666667
935	1	144873887	144873887	C	T	exonic	PDE4DIP	NA	synonymous SNV	PDE4DIP:NM_001198834:exon31:c.G5070A:p.Q1690Q,PDE4DIP:NM_014644:exon31:c.G5070A:p.Q1690Q,PDE4DIP:NM_001198832:exon34:c.G4938A:p.Q1646Q	exonic	ENSG00000178104	NA	synonymous SNV	ENSG00000178104:ENST00000369354:exon31:c.G5070A:p.Q1690Q,ENSG00000178104:ENST00000369356:exon31:c.G5070A:p.Q1690Q,ENSG00000178104:ENST00000313382:exon34:c.G4938A:p.Q1646Q,ENSG00000178104:ENST00000369359:exon34:c.G5478A:p.Q1826Q	Score=435;Name=lod=78	NA	1q21.1	Score=687;Name=V$PPARG_02	NA	NA	NA	rs1699787	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.867924	NA	NA	NA	NA	NA	0.5	NA	7.1666666
935	1	145075854	145075854	G	C	exonic	PDE4DIP	NA	synonymous SNV	PDE4DIP:NM_022359:exon1:c.C9G:p.G3G	exonic	ENSG00000178104	NA	synonymous SNV	ENSG00000178104:ENST00000369345:exon1:c.C9G:p.G3G,ENSG00000178104:ENST00000369348:exon1:c.C9G:p.G3G,ENSG00000178104:ENST00000369359:exon1:c.C9G:p.G3G,ENSG00000178104:ENST00000526359:exon1:c.C9G:p.G3G,ENSG00000178104:ENST00000528661:exon1:c.C9G:p.G3G,ENSG00000178104:ENST00000530740:exon1:c.C9G:p.G3G	NA	NA	1q21.1	NA	Name=TBP,ZNF274,SUZ12,CCNT2,CtBP2,ZNF263,Pol2	Name=117	NA	rs1663853	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.51	0.5	0.5	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.896611	NA	NA	NA	NA	NA	0.493	NA	7.1666666
935	11	48346924	48346924	T	C	exonic	OR4C3	NA	synonymous SNV	OR4C3:NM_001004702:exon1:c.T432C:p.A144A	exonic	ENSG00000176547	NA	synonymous SNV	ENSG00000176547:ENST00000319856:exon1:c.T432C:p.A144A	Score=557;Name=lod=244	NA	11p11.2	Score=740;Name=V$PPARG_01	NA	NA	NA	rs72911454	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.56584	NA	NA	NA	NA	NA	0.232	NA	7.1666666
935	11	56467881	56467881	T	C	exonic	OR9G1,OR9G9	NA	synonymous SNV	OR9G1:NM_001005213:exon1:c.T18C:p.H6H,OR9G9:NM_001013358:exon1:c.T18C:p.H6H	exonic	ENSG00000174914	NA	synonymous SNV	ENSG00000174914:ENST00000312153:exon1:c.T18C:p.H6H	Score=366;Name=lod=41	NA	11q12.1	NA	NA	Name=14	NA	rs73474900	NA	NA	NA	0.000199681	NA	NA	0.0014	NA	NA	NA	NA	NA	NA	0.5	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.373379	NA	NA	NA	NA	NA	0.442	NA	7.1666666
935	17	21319302	21319302	T	C	exonic	KCNJ12,KCNJ18	NA	synonymous SNV	KCNJ18:NM_001194958:exon3:c.T648C:p.G216G,KCNJ12:NM_021012:exon3:c.T648C:p.G216G	exonic	ENSG00000184185	NA	synonymous SNV	ENSG00000184185:ENST00000331718:exon3:c.T648C:p.G216G,ENSG00000184185:ENST00000583088:exon3:c.T648C:p.G216G	Score=591;Name=lod=336	NA	17p11.2	Score=878;Name=V$CEBPA_01	NA	NA	NA	rs1657743	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5001	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.847937	NA	NA	NA	NA	NA	0.442	NA	7.1665666
935	10	124742858	124742858	G	A	exonic	PSTK	NA	synonymous SNV	PSTK:NM_153336:exon3:c.G579A:p.R193R	exonic	ENSG00000179988	NA	synonymous SNV	ENSG00000179988:ENST00000368887:exon3:c.G579A:p.R193R,ENSG00000179988:ENST00000405485:exon3:c.G579A:p.R193R	NA	NA	10q26.13	NA	NA	NA	NA	rs45498396	0.12	0.12	0.109	0.11242	0.1869	0.0099	0.1254	0.1785	0.0429	0.18	0.01	0.15	0.14	0.1327	0.18	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.997	T	0.001	T	.	0.57	7.08	-2.41	-0.708	0.213	15.141	0.569992	NA	NA	0.181047	0.147072	NA	0.174	NA	7.1660196
935	22	42017901	42017901	C	G	intronic	XRCC6	NA	NA	NA	UTR5	ENSG00000196419	ENST00000359308:c.-108C>G	NA	NA	NA	NA	22q13.2	NA	Name=Pol2-4H8,HA-E2F1,POU2F2,SP1,Oct-2	Name=108	NA	NA	NA	NA	NA	0.000599042	0.001	NA	0.0014	NA	0.001	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.307913	1.307913	NA	NA	NA	NA	0.007	NA	7.1656667
936	7	24742436	24742436	T	C	exonic	DFNA5	NA	synonymous SNV	DFNA5:NM_001127454:exon8:c.A708G:p.A236A,DFNA5:NM_001127453:exon9:c.A1200G:p.A400A,DFNA5:NM_004403:exon9:c.A1200G:p.A400A	exonic	ENSG00000105928	NA	synonymous SNV	ENSG00000105928:ENST00000430096:exon2:c.A60G:p.A20A,ENSG00000105928:ENST00000409970:exon8:c.A708G:p.A236A,ENSG00000105928:ENST00000419307:exon8:c.A708G:p.A236A,ENSG00000105928:ENST00000342947:exon9:c.A1200G:p.A400A,ENSG00000105928:ENST00000409775:exon9:c.A1200G:p.A400A,ENSG00000105928:ENST00000545231:exon11:c.A708G:p.A236A	NA	NA	7p15.3	Score=923;Name=V$GATA1_04	NA	NA	NA	rs17149912	0.2	0.2	0.166	0.201877	0.1501	0.2798	0.2637	0.1384	0.2168	0.17	0.27	0.26	0.14	0.1961	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.260989	NA	NA	0.15593	0.132547	ID=COSM150252;OCCURENCE=1(stomach)	0.109	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000037971.1;CLNDSDB=.;CLNDSDBID=.	7.1645366
936	9	77257346	77257346	G	A	exonic	RORB	NA	synonymous SNV	RORB:NM_006914:exon4:c.G252A:p.R84R	exonic	ENSG00000198963	NA	synonymous SNV	ENSG00000198963:ENST00000376896:exon4:c.G252A:p.R84R,ENSG00000198963:ENST00000396204:exon4:c.G285A:p.R95R	Score=605;Name=lod=385	NA	9q21.13	Score=979;Name=V$LYF1_01	NA	NA	NA	rs2273975	0.12	0.12	0.104	0.0950479	0.166	0.0873	0.1556	0.0371	0.0654	0.16	0.12	0.14	0.05	0.1582	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.004734	NA	NA	0.178488	0.050613	NA	0.087	NA	7.1639786
936	19	53077411	53077411	T	C	exonic	ZNF701	NA	nonsynonymous SNV	ZNF701:NM_018260:exon2:c.T11C:p.L4P,ZNF701:NM_001172655:exon3:c.T209C:p.L70P	exonic	ENSG00000167562	NA	nonsynonymous SNV	ENSG00000167562:ENST00000391785:exon2:c.T11C:p.L4P,ENSG00000167562:ENST00000301093:exon3:c.T209C:p.L70P,ENSG00000167562:ENST00000540331:exon3:c.T209C:p.L70P,ENSG00000167562:ENST00000593941:exon3:c.T209C:p.L70P,ENSG00000167562:ENST00000596514:exon4:c.T230C:p.L77P	NA	NA	19q13.41	NA	NA	NA	NA	rs162832	0.62	0.62	0.689	0.714457	0.7227	0.4276	0.6758	0.9433	0.7198	0.66	0.41	0.65	0.81	0.7184	0.91	.	.	0.0	B	0.0	B	.	.	1.000	P	-0.345	N	5.65	T	-1.079	T	0.000	T	0.105	0.053	4.288	-2.36	-1.123	-0.042	3.463	0.05259	NA	0.31	0.728309	0.905583	NA	0.746	NA	7.1639244
936	1	219347143	219347143	G	A	upstream	LOC643723,LYPLAL1	NA	NA	NA	ncRNA_exonic	ENSG00000228063	NA	NA	NA	NA	NA	1q41	NA	Name=Pol2-4H8,USF1_(SC-8983),E2F6,eGFP-JunD,IRF4_(M-17),Pbx3,Sin3Ak-20,HA-E2F1,YY1_(C-20),Egr-1,YY1,STAT3,Pol2(phosphoS2),SP1,NRSF,PU.1,Pol2,HMGN3,POU2F2,E2F4,FOXA1_(C-20),E2F6_(H-50),TAF1,GATA-1,Pol2(b),GTF2F1_(RAP-74),IRF1,TBP,USF-1,Nrf1,EBF1_(C-8),Oct-2,PAX5-N19,PAX5-C20,NFKB,HEY1,ELF1_(SC-631),c-Myc,CCNT2,Max	Name=147	NA	NA	NA	NA	NA	0.000599042	0.003	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.814591	NA	NA	NA	NA	NA	0.051	NA	7.1636666
936	11	92573911	92573911	G	T	exonic	FAT3	NA	nonsynonymous SNV	FAT3:NM_001008781:exon17:c.G10552T:p.V3518L	exonic	ENSG00000165323	NA	nonsynonymous SNV	ENSG00000165323:ENST00000298047:exon17:c.G10552T:p.V3518L,ENSG00000165323:ENST00000409404:exon17:c.G10552T:p.V3518L,ENSG00000165323:ENST00000525166:exon17:c.G10102T:p.V3368L	NA	NA	11q14.3	NA	NA	NA	NA	rs10765565	0.3	0.3	0.268	0.323482	0.3976	0.2163	0.3386	0.202	0.5112	0.4	0.22	0.35	0.2	0.374	0.4	0.95	T	0.001	B	0.006	B	.	.	0.000	P	0.525	N	0.62	T	-0.955	T	0.000	T	0.103	-0.68	1.037	0.41	-0.174	1.265	6.807	-0.679977	NA	1	0.40057	0.218675	NA	0.326	NA	7.1611634
936	9	113459655	113459655	C	T	exonic	MUSK	NA	synonymous SNV	MUSK:NM_001166280:exon5:c.C537T:p.N179N,MUSK:NM_001166281:exon5:c.C537T:p.N179N,MUSK:NM_005592:exon5:c.C537T:p.N179N	exonic	ENSG00000030304	NA	synonymous SNV	ENSG00000030304:ENST00000374439:exon3:c.C183T:p.N61N,ENSG00000030304:ENST00000189978:exon5:c.C537T:p.N179N,ENSG00000030304:ENST00000374440:exon5:c.C183T:p.N61N,ENSG00000030304:ENST00000374448:exon5:c.C537T:p.N179N,ENSG00000030304:ENST00000416899:exon5:c.C537T:p.N179N	Score=620;Name=lod=443	NA	9q31.3	NA	NA	NA	NA	rs41279051	0.13	0.13	0.122	0.122005	0.171	0.1974	0.072	0.0068	0.1851	0.18	0.19	0.1	0.01	0.1615	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.054894	NA	NA	0.173225	0.035417	ID=COSM43011;OCCURENCE=1(stomach),1(kidney),3(central_nervous_system)	0.145	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117649.1;CLNDSDB=.;CLNDSDBID=.	7.1609416
936	7	142045802	142045802	T	C	intergenic	LOC730441,MTRNR2L6	dist=73734;dist=328329	NA	NA	exonic	ENSG00000211745	NA	synonymous SNV	ENSG00000211745:ENST00000390392:exon2:c.T330C:p.C110C	Score=272;Name=lod=17	NA	7q34	Score=886;Name=V$NF1_Q6	NA	Name=2	NA	rs2855871	NA	NA	0.186	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3392	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.275339	NA	NA	NA	NA	NA	0.101	NA	7.1608
936	17	48768486	48768486	A	G	exonic	ABCC3	NA	synonymous SNV	ABCC3:NM_003786:exon31:c.A4509G:p.E1503E	exonic	ENSG00000108846	NA	synonymous SNV	ENSG00000108846:ENST00000285238:exon31:c.A4509G:p.E1503E	Score=471;Name=lod=109	NA	17q21.33	Score=877;Name=V$OCT1_06	NA	NA	NA	rs1051640	0.11	0.11	0.089	0.104034	0.1829	0.0417	0.1095	0.09	0.1022	0.18	0.03	0.13	0.09	0.1461	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.102331	NA	NA	0.178256	0.084203	NA	0.072	NA	7.1594106
936	2	69709919	69709919	A	G	exonic	AAK1	NA	synonymous SNV	AAK1:NM_014911:exon18:c.T2391C:p.S797S	exonic	ENSG00000115977	NA	synonymous SNV	ENSG00000115977:ENST00000406297:exon18:c.T2391C:p.S797S,ENSG00000115977:ENST00000409085:exon18:c.T2391C:p.S797S	Score=639;Name=lod=525	NA	2p13.3	NA	NA	Name=13	NA	rs6721259	0.13	0.13	0.129	0.142772	0.1938	0.0407	0.1023	0.2141	0.1278	0.19	0.02	0.12	0.19	0.143	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.370207	1.370207	NA	0.170578	0.184266	NA	0.13	NA	7.1592886
936	19	4101062	4101062	G	T	exonic	MAP2K2	NA	synonymous SNV	MAP2K2:NM_030662:exon6:c.C660A:p.I220I	exonic	ENSG00000126934	NA	synonymous SNV	ENSG00000126934:ENST00000262948:exon6:c.C660A:p.I220I,ENSG00000126934:ENST00000394867:exon7:c.C369A:p.I123I	Score=657;Name=lod=626	NA	19p13.3	Score=868;Name=V$ZID_01	NA	NA	NA	rs10250	0.47	0.47	0.4	0.433307	0.4761	0.625	0.5562	0.2443	0.3599	0.46	0.6	0.56	0.26	0.5472	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.397478	1.397478	NA	0.484979	0.287142	ID=COSM1481088,COSM439538;OCCURENCE=1(breast)	0.355	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000039490.1;CLNDSDB=.;CLNDSDBID=.	7.1583876
936	1	46827485	46827485	C	T	exonic	NSUN4	NA	synonymous SNV	NSUN4:NM_001256127:exon6:c.C975T:p.P325P,NSUN4:NM_001256128:exon6:c.C975T:p.P325P,NSUN4:NM_199044:exon6:c.C1122T:p.P374P	exonic	ENSG00000117481	NA	synonymous SNV	ENSG00000117481:ENST00000474844:exon6:c.C1122T:p.P374P,ENSG00000117481:ENST00000537428:exon6:c.C975T:p.P325P,ENSG00000117481:ENST00000536062:exon7:c.C975T:p.P325P	Score=512;Name=lod=160	NA	1p33	Score=733;Name=V$SRF_01	NA	NA	NA	rs1053624	0.16	0.16	0.149	NA	NA	NA	NA	NA	NA	0.27	0.02	0.17	0.14	0.2186	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.570342	NA	NA	0.289884	0.152519	NA	0.21	NA	7.1581826
936	17	1686410	1686410	T	C	exonic	SMYD4	NA	nonsynonymous SNV	SMYD4:NM_052928:exon10:c.A2180G:p.Y727C	exonic	ENSG00000186532	NA	nonsynonymous SNV	ENSG00000186532:ENST00000491788:exon6:c.A1592G:p.Y531C,ENSG00000186532:ENST00000305513:exon10:c.A2180G:p.Y727C	NA	NA	17p13.3	NA	NA	NA	NA	rs9902398	0.79	0.79	0.814	0.776757	0.7386	0.7758	0.7565	0.9198	0.638	0.76	0.78	0.71	0.92	0.7293	0.92	0.15	T	0.037	B	0.004	B	0.070	N	1.000	P	0	N	-0.01	T	-0.910	T	0.000	T	0.094	0.226	5.222	-11.7	-2.928	-3.368	12.581	0.226433	NA	0.18	0.707558	0.890831	NA	0.732	NA	7.1578754
936	17	17168164	17168164	G	A	exonic	COPS3	NA	synonymous SNV	COPS3:NM_001199125:exon6:c.C513T:p.I171I,COPS3:NM_003653:exon6:c.C573T:p.I191I	exonic	ENSG00000141030	NA	synonymous SNV	ENSG00000141030:ENST00000268717:exon6:c.C573T:p.I191I,ENSG00000141030:ENST00000417352:exon6:c.C573T:p.I191I,ENSG00000141030:ENST00000439936:exon6:c.C513T:p.I171I,ENSG00000141030:ENST00000539941:exon6:c.C513T:p.I171I	Score=656;Name=lod=616	NA	17p11.2	Score=827;Name=V$CDP_02	Name=ZNF263	NA	NA	rs3182911	0.51	0.51	0.462	0.486222	0.5119	0.6558	0.5317	0.3215	0.4755	0.53	0.65	0.5	0.33	0.498	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.028595	NA	NA	0.49907	0.325919	NA	0.464	NA	7.1576966
936	16	1538363	1538363	C	A	exonic	PTX4	NA	nonsynonymous SNV	PTX4:NM_001013658:exon1:c.G106T:p.G36C	exonic	ENSG00000251692	NA	nonsynonymous SNV	ENSG00000251692:ENST00000293922:exon1:c.G106T:p.G36C	NA	NA	16p13.3	NA	NA	Name=5	NA	rs1040499	0.5	0.5	0.548	0.499601	0.3897	0.5119	0.3242	0.7534	0.3814	0.41	0.55	0.32	0.71	0.4071	0.71	0.14	T	0.0	B	0.0	B	.	.	1.000	P	.	.	3.13	T	-1.058	T	0.000	T	0.039	0.536	6.903	-0.196	-0.511	-0.524	2.442	0.536146	NA	0.13	0.378953	0.6794	NA	0.594	NA	7.1575804
936	1	1021346	1021346	A	G	exonic	C1orf159	NA	synonymous SNV	C1orf159:NM_017891:exon7:c.T357C:p.I119I	exonic	ENSG00000131591	NA	synonymous SNV	ENSG00000131591:ENST00000379320:exon5:c.T357C:p.I119I,ENSG00000131591:ENST00000294576:exon7:c.T357C:p.I119I,ENSG00000131591:ENST00000379319:exon7:c.T357C:p.I119I,ENSG00000131591:ENST00000379325:exon7:c.T357C:p.I119I,ENSG00000131591:ENST00000421241:exon7:c.T357C:p.I119I,ENSG00000131591:ENST00000434641:exon7:c.T357C:p.I119I,ENSG00000131591:ENST00000437760:exon7:c.T357C:p.I119I,ENSG00000131591:ENST00000448924:exon8:c.T465C:p.I155I,ENSG00000131591:ENST00000379339:exon9:c.T465C:p.I155I	Score=459;Name=lod=98	NA	1p36.33	Score=706;Name=V$HOX13_01	NA	NA	NA	rs10907177	0.17	0.17	0.189	0.178914	0.1809	0.122	0.1311	0.239	0.1881	0.16	0.13	0.13	0.25	0.1701	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.097474	NA	NA	0.158372	0.243305	NA	0.203	NA	7.1572946
936	19	37488481	37488481	G	C	exonic	ZNF568	NA	nonsynonymous SNV	ZNF568:NM_001204839:exon9:c.G1696C:p.G566R,ZNF568:NM_001204838:exon10:c.G1888C:p.G630R	exonic	ENSG00000198453	NA	nonsynonymous SNV	ENSG00000198453:ENST00000455427:exon9:c.G1696C:p.G566R	NA	NA	19q13.12	NA	NA	NA	NA	rs1363753	0.52	0.52	0.488	0.552716	0.5239	0.2986	0.598	0.7186	0.5879	0.53	0.3	0.59	0.71	0.6522	0.71	.	.	0.0	B	0.0	B	.	.	1.000	P	-2.39	N	3.47	T	-1.016	T	0.000	T	0.056	-0.705	0.955	1.64	0.082	-5.078	1.175	-0.705219	NA	1	NA	NA	NA	0.551	NA	7.1572334
936	9	78803512	78803512	C	T	exonic	PCSK5	NA	synonymous SNV	PCSK5:NM_001190482:exon18:c.C2301T:p.C767C,PCSK5:NM_006200:exon18:c.C2301T:p.C767C	exonic	ENSG00000099139	NA	synonymous SNV	ENSG00000099139:ENST00000424854:exon11:c.C1320T:p.C440C,ENSG00000099139:ENST00000376752:exon18:c.C2301T:p.C767C,ENSG00000099139:ENST00000545128:exon18:c.C2301T:p.C767C	Score=455;Name=lod=94	NA	9q21.13	Score=811;Name=V$GRE_C	NA	NA	NA	rs10521468	0.1	0.1	0.098	0.0870607	0.1849	NA	0.1326	0.0703	0.0665	0.18	NA	0.14	0.07	0.1426	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.94766	NA	NA	0.182791	0.093963	NA	0.072	NA	7.1563756
936	3	123665902	123665902	T	G	exonic	CCDC14	NA	nonsynonymous SNV	CCDC14:NM_022757:exon7:c.A970C:p.T324P	exonic	ENSG00000175455	NA	nonsynonymous SNV	ENSG00000175455:ENST00000310351:exon4:c.A613C:p.T205P,ENSG00000175455:ENST00000485727:exon4:c.A493C:p.T165P,ENSG00000175455:ENST00000489746:exon4:c.A493C:p.T165P,ENSG00000175455:ENST00000426152:exon5:c.A271C:p.T91P,ENSG00000175455:ENST00000433542:exon7:c.A970C:p.T324P,ENSG00000175455:ENST00000409697:exon8:c.A1036C:p.T346P,ENSG00000175455:ENST00000488653:exon8:c.A1093C:p.T365P	NA	NA	3q21.1	NA	NA	NA	NA	rs17310144	0.32	0.32	0.29	0.298522	0.5676	0.1002	0.4035	0.0998	0.4202	0.56	0.08	0.47	0.11	0.4887	0.62	0.28	T	0.899	P	0.367	B	0.278	N	1.000	P	0.69	N	0.96	T	-0.945	T	0.000	T	0.218	1.87	12.21	-2.21	-0.253	0.108	10.212	1.869719	1.869719	0.1	0.621512	0.189287	NA	0.326	NA	7.1555214
936	10	33214802	33214802	A	G	exonic	ITGB1	NA	synonymous SNV	ITGB1:NM_033668:exon5:c.T783C:p.C261C,ITGB1:NM_002211:exon6:c.T783C:p.C261C,ITGB1:NM_133376:exon6:c.T783C:p.C261C	exonic	ENSG00000150093	NA	synonymous SNV	ENSG00000150093:ENST00000423113:exon5:c.T783C:p.C261C,ENSG00000150093:ENST00000302278:exon6:c.T783C:p.C261C,ENSG00000150093:ENST00000374956:exon6:c.T783C:p.C261C,ENSG00000150093:ENST00000396033:exon6:c.T783C:p.C261C	Score=569;Name=lod=273	NA	10p11.22	Score=800;Name=V$CMYB_01	NA	NA	NA	rs2298141	0.15	0.15	0.131	0.15655	0.172	0.245	0.1859	0.0401	0.1861	0.16	0.22	0.18	0.03	0.1636	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.376437	1.376437	NA	0.175581	0.056741	NA	0.13	NA	7.1554856
936	18	14542648	14542648	C	A	exonic	POTEC	NA	nonsynonymous SNV	POTEC:NM_001137671:exon1:c.G498T:p.M166I	exonic	ENSG00000183206	NA	nonsynonymous SNV	ENSG00000183206:ENST00000358970:exon1:c.G498T:p.M166I,ENSG00000183206:ENST00000511306:exon1:c.G498T:p.M166I	NA	NA	18p11.21	NA	NA	NA	NA	rs12454500	0.17	0.17	0.13	0.161941	0.0358	0.4276	0.1628	0.0469	0.1728	0.04	0.44	0.15	0.05	0.1087	0.44	1	T	0.016	B	0.035	B	.	.	1.000	P	-1.735	N	0.13	T	-0.958	T	0.000	T	0.02	-1.523	0.016	0.251	0.049	0.356	4.401	-1.522769	NA	NA	0.033627	0.039017	NA	0.043	NA	7.1552064
937	8	125740204	125740204	G	A	UTR5	MTSS1	NM_014751:c.-8C>T	NA	NA	UTR5	ENSG00000170873	ENST00000354184:c.-159567C>T,ENST00000518547:c.-8C>T,ENST00000378017:c.-8C>T,ENST00000325064:c.-8C>T	NA	NA	Score=643;Name=lod=548	NA	8q24.13	NA	Name=YY1_(C-20)	Name=13	NA	rs78566090	0.07	0.07	0.049	0.0529153	0.0626	0.0804	0.1326	0.0144	0.0102	0.06	0.08	0.13	0.01	0.0624	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.51028	2.51028	NA	0.053953	0.017938	NA	0.036	NA	7.1543804
937	17	67210992	67210992	T	C	exonic	ABCA10	NA	nonsynonymous SNV	ABCA10:NM_080282:exon10:c.A859G:p.I287V	exonic	ENSG00000154263	NA	nonsynonymous SNV	ENSG00000154263:ENST00000518929:exon7:c.A859G:p.I287V,ENSG00000154263:ENST00000523419:exon7:c.A859G:p.I287V,ENSG00000154263:ENST00000522406:exon9:c.A859G:p.I287V,ENSG00000154263:ENST00000269081:exon10:c.A859G:p.I287V,ENSG00000154263:ENST00000416101:exon10:c.A859G:p.I287V,ENSG00000154263:ENST00000432313:exon10:c.A859G:p.I287V	NA	NA	17q24.3	NA	NA	NA	NA	rs11657804	0.26	0.26	0.229	0.261581	0.4076	0.2788	0.2839	0.0166	0.409	0.41	0.24	0.3	0.02	0.3623	0.41	0.65	T	0.198	B	0.123	B	.	.	0.358	P	0.585	N	-2.39	D	-1.074	T	0.000	T	0.081	-1.377	0.025	-0.889	-0.462	0.177	5.009	-1.377296	NA	0.39	0.40908	0.083295	NA	0.246	NA	7.1543534
937	11	2415292	2415292	T	C	intronic	CD81	NA	NA	NA	exonic	ENSG00000110651	NA	nonsynonymous SNV	ENSG00000110651:ENST00000481687:exon1:c.T167C:p.V56A	NA	NA	11p15.5	NA	NA	NA	NA	rs1989896	0.02	0.02	0.033	0.0329473	0.002	NA	0.0101	0.118	NA	NA	NA	0.01	0.1	0.0099	0.1	0.78	T	.	.	.	.	.	.	1.000	N	.	.	0.21	T	-1.098	T	0.002	T	0.041	-1.486	0.018	-0.436	-0.810	-2.217	2.709	-1.486436	NA	NA	0.000698	0.1	NA	0.043	NA	7.1540687
937	17	79805134	79805134	G	A	exonic	P4HB	NA	synonymous SNV	P4HB:NM_000918:exon5:c.C714T:p.I238I	exonic	ENSG00000185624	NA	synonymous SNV	ENSG00000185624:ENST00000570907:exon2:c.C123T:p.I41I,ENSG00000185624:ENST00000576052:exon3:c.C444T:p.I148I,ENSG00000185624:ENST00000439918:exon4:c.C582T:p.I194I,ENSG00000185624:ENST00000573778:exon4:c.C507T:p.I169I,ENSG00000185624:ENST00000576380:exon4:c.C261T:p.I87I,ENSG00000185624:ENST00000331483:exon5:c.C714T:p.I238I	Score=489;Name=lod=129	NA	17q25.3	NA	NA	NA	NA	rs2070871	0.13	0.13	0.103	0.0976438	0.168	0.0903	0.2277	0.0083	0.0613	0.18	0.1	0.21	0.01	0.1535	0.21	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	1.367	10.5	1.03	0.379	0.065	4.806	1.367499	1.367499	0	0.19186	0.035406	NA	0.13	NA	7.1533066
937	20	57290347	57290347	C	G	exonic	NPEPL1	NA	nonsynonymous SNV	NPEPL1:NM_024663:exon12:c.C1537G:p.L513V,NPEPL1:NM_001204872:exon13:c.C1453G:p.L485V,NPEPL1:NM_001204873:exon13:c.C1393G:p.L465V	exonic	ENSG00000215440	NA	nonsynonymous SNV	ENSG00000215440:ENST00000356091:exon12:c.C1537G:p.L513V,ENSG00000215440:ENST00000525817:exon13:c.C1393G:p.L465V,ENSG00000215440:ENST00000525967:exon13:c.C1453G:p.L485V	NA	NA	20q13.32	NA	NA	NA	NA	rs6026468	0.57	0.57	0.627	NA	NA	NA	NA	NA	NA	0.58	0.45	0.43	0.83	0.573	0.83	1	T	0.0	B	0.0	B	0.406	N	1.000	P	-0.895	N	1.57	T	-0.928	T	0.000	T	0.068	-1.76	0.01	-10.5	-3.969	-0.623	1.476	-1.760425	NA	0.95	0.607058	0.785544	NA	0.623	NA	7.1532754
937	9	37782111	37782111	C	T	exonic	EXOSC3	NA	synonymous SNV	EXOSC3:NM_016042:exon3:c.G498A:p.Q166Q	exonic	ENSG00000107371	NA	synonymous SNV	ENSG00000107371:ENST00000327304:exon3:c.G498A:p.Q166Q	Score=662;Name=lod=653	NA	9p13.2	Score=796;Name=V$SRF_C	NA	NA	NA	rs7158	0.54	0.54	0.522	0.564097	0.4841	0.5337	0.5908	0.612	0.5941	0.49	0.52	0.57	0.59	0.5335	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.751977	NA	NA	0.497209	0.591466	NA	0.435	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117006.2;CLNDSDB=.;CLNDSDBID=.	7.1518576
937	17	46020698	46020698	C	T	exonic	PNPO	NA	synonymous SNV	PNPO:NM_018129:exon2:c.C165T:p.S55S	exonic	ENSG00000108439	NA	synonymous SNV	ENSG00000108439:ENST00000225573:exon2:c.C165T:p.S55S,ENSG00000108439:ENST00000434554:exon2:c.C165T:p.S55S,ENSG00000108439:ENST00000544840:exon2:c.C165T:p.S55S	Score=619;Name=lod=437	NA	17q21.32	NA	NA	NA	NA	rs11079804	0.15	0.15	0.129	0.16254	0.162	0.1617	0.2176	0.0537	0.272	0.15	0.19	0.17	0.07	0.1822	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.085518	NA	NA	0.170814	0.074898	ID=COSM1179771;OCCURENCE=1(prostate)	0.145	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118001.2;CLNDSDB=.;CLNDSDBID=.	7.1516526
937	3	49362369	49362369	C	T	exonic	USP4	NA	synonymous SNV	USP4:NM_001251877:exon5:c.G591A:p.K197K,USP4:NM_003363:exon5:c.G591A:p.K197K,USP4:NM_199443:exon5:c.G591A:p.K197K	exonic	ENSG00000114316	NA	synonymous SNV	ENSG00000114316:ENST00000265560:exon5:c.G591A:p.K197K,ENSG00000114316:ENST00000351842:exon5:c.G591A:p.K197K,ENSG00000114316:ENST00000415188:exon5:c.G591A:p.K197K,ENSG00000114316:ENST00000416417:exon5:c.G591A:p.K197K	Score=556;Name=lod=243	NA	3p21.31	Score=955;Name=V$CEBPB_02	NA	NA	NA	rs56038006	0.13	0.13	0.119	0.0920527	0.1988	0.0546	0.098	0.0651	0.0532	0.2	0.07	0.14	0.07	0.1433	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.99401	NA	NA	0.17314	0.09714	ID=COSM149390;OCCURENCE=1(stomach)	0.196	NA	7.1514266
937	4	173232805	173232805	G	A	exonic	GALNTL6	NA	synonymous SNV	GALNTL6:NM_001034845:exon4:c.G288A:p.E96E	exonic	ENSG00000174473	NA	synonymous SNV	ENSG00000174473:ENST00000508122:exon3:c.G237A:p.E79E,ENSG00000174473:ENST00000506823:exon4:c.G288A:p.E96E	Score=537;Name=lod=203	NA	4q34.1	Score=941;Name=V$TCF11_01	NA	NA	NA	rs9312524	0.12	0.12	0.12	0.104233	0.1859	0.0089	0.0879	0.1558	0.0603	0.19	0.01	0.09	0.17	0.1434	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.174287	NA	NA	0.187093	0.151158	NA	0.217	NA	7.1502736
937	5	34811131	34811131	G	A	exonic	RAI14	NA	synonymous SNV	RAI14:NM_001145523:exon7:c.G441A:p.P147P,RAI14:NM_001145520:exon8:c.G465A:p.P155P,RAI14:NM_001145522:exon8:c.G465A:p.P155P,RAI14:NM_015577:exon8:c.G465A:p.P155P,RAI14:NM_001145521:exon9:c.G465A:p.P155P,RAI14:NM_001145525:exon10:c.G474A:p.P158P	exonic	ENSG00000039560	NA	synonymous SNV	ENSG00000039560:ENST00000397449:exon7:c.G444A:p.P148P,ENSG00000039560:ENST00000506376:exon7:c.G441A:p.P147P,ENSG00000039560:ENST00000265109:exon8:c.G465A:p.P155P,ENSG00000039560:ENST00000428746:exon8:c.G465A:p.P155P,ENSG00000039560:ENST00000512629:exon8:c.G465A:p.P155P,ENSG00000039560:ENST00000503673:exon9:c.G465A:p.P155P,ENSG00000039560:ENST00000515799:exon10:c.G474A:p.P158P	Score=617;Name=lod=428	NA	5p13.2	NA	Name=STAT1	NA	NA	rs35607113	0.09	0.09	0.08	0.0798722	0.162	0.0109	0.1081	0.0091	0.1421	0.18	0.01	0.14	0.01	0.1624	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.315895	1.315895	NA	0.192093	0.033591	NA	0.065	NA	7.1501736
937	11	117391966	117391966	G	A	exonic	DSCAML1	NA	synonymous SNV	DSCAML1:NM_020693:exon6:c.C1272T:p.R424R	exonic	ENSG00000177103	NA	synonymous SNV	ENSG00000177103:ENST00000527706:exon4:c.C462T:p.R154R,ENSG00000177103:ENST00000321322:exon6:c.C1272T:p.R424R	Score=538;Name=lod=204	NA	11q23.3	Score=812;Name=V$CDPCR3_01	NA	NA	NA	rs2276340	0.17	0.17	0.128	0.199681	0.1581	0.253	0.1888	0.0938	0.3384	0.16	0.26	0.17	0.07	0.1974	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.491377	1.491377	NA	0.161895	0.104044	NA	0.094	NA	7.1492716
937	15	42459034	42459034	T	C	exonic	VPS39	NA	synonymous SNV	VPS39:NM_015289:exon14:c.A1455G:p.L485L	exonic	ENSG00000166887	NA	synonymous SNV	ENSG00000166887:ENST00000318006:exon14:c.A1455G:p.L485L,ENSG00000166887:ENST00000348544:exon15:c.A1488G:p.L496L	Score=481;Name=lod=120	NA	15q15.1	Score=827;Name=V$MYCMAX_01	NA	NA	NA	rs1619030	0.31	0.31	0.303	0.398363	0.1332	0.1815	0.4942	0.739	0.3661	0.12	0.16	0.44	0.67	0.2447	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.333606	1.333606	NA	0.139684	0.625511	NA	0.341	NA	7.1490826
937	17	38911363	38911363	G	A	exonic	KRT25	NA	nonsynonymous SNV	KRT25:NM_181534:exon1:c.C161T:p.S54L	exonic	ENSG00000204897	NA	nonsynonymous SNV	ENSG00000204897:ENST00000312150:exon1:c.C161T:p.S54L	NA	NA	17q21.2	NA	NA	NA	NA	rs12951399	0.37	0.37	0.357	0.321086	0.3897	0.6597	0.2911	0.031	0.3149	0.41	0.65	0.3	0.04	0.3827	0.65	0.68	T	0.001	B	0.0	B	0.045	N	1.000	P	0.55	N	-1.73	D	-0.966	T	0.000	T	0.091	-0.27	2.705	1.03	-0.029	0.676	5.397	-0.2701	NA	0.25	0.413605	0.092828	NA	0.283	NA	7.1473284
937	14	77935520	77935520	G	A	exonic	AHSA1	NA	synonymous SNV	AHSA1:NM_012111:exon9:c.G945A:p.T315T	exonic	ENSG00000100591	NA	synonymous SNV	ENSG00000100591:ENST00000557476:exon2:c.G291A:p.T97T,ENSG00000100591:ENST00000216479:exon9:c.G945A:p.T315T,ENSG00000100591:ENST00000555133:exon9:c.G540A:p.T180T	NA	NA	14q24.3	NA	NA	NA	NA	rs7250	0.51	0.51	0.488	0.479433	0.4871	0.9187	0.513	0.0946	0.5153	0.49	0.92	0.45	0.11	0.5113	0.92	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.035	T	0.000	T	.	0.543	6.94	-4.83	-0.791	-0.993	11.243	0.543292	NA	NA	0.522093	0.165002	NA	0.384	NA	7.1461736
937	11	6262715	6262715	G	A	exonic	CNGA4	NA	synonymous SNV	CNGA4:NM_001037329:exon5:c.G972A:p.Q324Q	exonic	ENSG00000132259	NA	synonymous SNV	ENSG00000132259:ENST00000379936:exon5:c.G972A:p.Q324Q,ENSG00000132259:ENST00000533426:exon5:c.G279A:p.Q93Q	Score=599;Name=lod=361	NA	11p15.4	Score=863;Name=V$YY1_01	NA	NA	NA	rs7129498	0.19	0.19	0.2	0.212061	0.163	0.0407	0.1599	0.4546	0.1483	0.18	0.04	0.14	0.42	0.1823	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.941443	NA	NA	0.176094	0.394366	NA	0.167	NA	7.1452726
938	1	226589958	226589958	G	A	exonic	PARP1	NA	synonymous SNV	PARP1:NM_001618:exon2:c.C243T:p.D81D	exonic	ENSG00000143799	NA	synonymous SNV	ENSG00000143799:ENST00000366790:exon2:c.C243T:p.D81D,ENSG00000143799:ENST00000366791:exon2:c.C243T:p.D81D,ENSG00000143799:ENST00000366792:exon2:c.C243T:p.D81D,ENSG00000143799:ENST00000366794:exon2:c.C243T:p.D81D	Score=483;Name=lod=123	NA	1q42.12	Score=862;Name=V$SREBP1_02	NA	NA	NA	rs1805404	0.26	0.26	0.225	0.218251	0.1541	0.4365	0.3573	0.115	0.1002	0.17	0.46	0.33	0.14	0.2085	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.043032	NA	NA	0.15907	0.125511	NA	0.217	NA	7.1449966
938	8	95655596	95655596	T	C	exonic	ESRP1	NA	synonymous SNV	ESRP1:NM_001034915:exon3:c.T327C:p.D109D,ESRP1:NM_001122825:exon3:c.T327C:p.D109D,ESRP1:NM_001122826:exon3:c.T327C:p.D109D,ESRP1:NM_001122827:exon3:c.T327C:p.D109D,ESRP1:NM_017697:exon3:c.T327C:p.D109D	exonic	ENSG00000104413	NA	synonymous SNV	ENSG00000104413:ENST00000358397:exon3:c.T327C:p.D109D,ENSG00000104413:ENST00000423620:exon3:c.T327C:p.D109D,ENSG00000104413:ENST00000433389:exon3:c.T327C:p.D109D,ENSG00000104413:ENST00000454170:exon3:c.T327C:p.D109D	Score=558;Name=lod=247	NA	8q22.1	Score=742;Name=V$TCF11MAFG_01	NA	NA	NA	rs72676907	0.09	0.09	0.078	0.0644968	0.1968	0.002	0.0735	0.0053	0.0665	0.22	0.0035	0.09	0.01	0.1443	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.46142	1.46142	NA	0.181412	0.032581	NA	0.138	NA	7.1441546
938	1	150974971	150974971	T	A	exonic	FAM63A	NA	nonsynonymous SNV	FAM63A:NM_001163258:exon3:c.A267T:p.R89S,FAM63A:NM_018379:exon3:c.A123T:p.R41S	exonic	ENSG00000143409	NA	nonsynonymous SNV	ENSG00000143409:ENST00000361738:exon3:c.A267T:p.R89S,ENSG00000143409:ENST00000361936:exon3:c.A123T:p.R41S	NA	NA	1q21.3	NA	NA	NA	NA	rs41310885	0.06	0.06	0.059	0.0533147	0.0646	NA	0.0331	0.1309	0.0061	0.07	NA	0.03	0.13	0.0534	0.13	0.77	T	0.022	B	0.023	B	0.101	N	1.000	P	0.55	N	1.01	T	-1.083	T	0.018	T	0.047	2.149	13.14	-0.099	-0.171	-0.099	0.829	2.148898	2.148898	0.18	0.071395	0.132547	NA	0.058	NA	7.1439384
938	16	5132636	5132636	C	T	exonic	ALG1	NA	synonymous SNV	ALG1:NM_019109:exon11:c.C1149T:p.F383F	exonic	ENSG00000033011	NA	synonymous SNV	ENSG00000033011:ENST00000262374:exon11:c.C1149T:p.F383F,ENSG00000033011:ENST00000544428:exon11:c.C816T:p.F272F,ENSG00000033011:ENST00000588623:exon12:c.C816T:p.F272F	Score=614;Name=lod=416	NA	16p13.3	Score=948;Name=V$P53_02	NA	NA	NA	rs1047732	0.47	0.47	0.49	0.519768	0.495	0.629	0.415	0.3903	0.682	0.48	0.6	0.41	0.38	0.5243	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.299723	1.299723	NA	0.503534	0.404189	NA	0.355	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000081982.1;CLNDSDB=.;CLNDSDBID=.	7.1438326
938	1	16330816	16330816	C	T	exonic	C1orf64	NA	synonymous SNV	C1orf64:NM_178840:exon1:c.C18T:p.D6D	exonic	ENSG00000183888	NA	synonymous SNV	ENSG00000183888:ENST00000329454:exon1:c.C18T:p.D6D	NA	NA	1p36.13	NA	Name=Pol2,TAF1,HEY1	Name=2	NA	rs1763617	0.2	0.2	0.168	0.195088	0.1581	0.2917	0.2089	0.1369	0.2025	0.17	0.27	0.19	0.16	0.2197	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.062375	NA	NA	0.145969	0.15066	NA	0.123	NA	7.1428976
938	20	18794714	18794714	C	T	exonic	SCP2D1	NA	synonymous SNV	SCP2D1:NM_178483:exon1:c.C255T:p.T85T	exonic	ENSG00000132631	NA	synonymous SNV	ENSG00000132631:ENST00000377428:exon1:c.C255T:p.T85T	Score=445;Name=lod=86	NA	20p11.23	Score=848;Name=V$COUP_01	NA	NA	NA	rs1053834	0.19	0.19	0.202	0.211661	0.175	0.0308	0.1643	0.4062	0.2065	0.18	0.05	0.16	0.38	0.1788	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.33438	NA	NA	0.17	0.362687	NA	0.268	NA	7.1428666
938	12	9013755	9013755	C	T	exonic	A2ML1	NA	nonsynonymous SNV	A2ML1:NM_144670:exon28:c.C3364T:p.R1122W	exonic	ENSG00000166535	NA	nonsynonymous SNV	ENSG00000166535:ENST00000539547:exon17:c.C1891T:p.R631W,ENSG00000166535:ENST00000541459:exon17:c.C2014T:p.R672W,ENSG00000166535:ENST00000299698:exon28:c.C3364T:p.R1122W	NA	NA	12p13.31	NA	NA	NA	NA	rs1860967	0.46	0.46	0.397	0.432308	0.3867	0.7857	0.5231	0.1067	0.4908	0.39	0.81	0.49	0.13	0.4321	0.81	0.19	T	0.919	P	0.601	P	0.787	N	1.000	P	1.7	L	1.17	T	-0.976	T	0.000	T	0.199	0.586	7.164	0.387	0.072	-0.361	2.615	0.586213	NA	0.05	0.372653	0.151854	NA	0.29	NA	7.1418804
938	2	241828012	241828012	T	C	exonic	C2orf54	NA	synonymous SNV	C2orf54:NM_001085437:exon4:c.A948G:p.E316E,C2orf54:NM_024861:exon4:c.A444G:p.E148E	exonic	ENSG00000172478	NA	synonymous SNV	ENSG00000172478:ENST00000307486:exon4:c.A501G:p.E167E,ENSG00000172478:ENST00000388934:exon4:c.A948G:p.E316E,ENSG00000172478:ENST00000402775:exon4:c.A444G:p.E148E	Score=399;Name=lod=56	NA	2q37.3	NA	Name=CTCF_(SC-5916),CTCF	Name=3	NA	rs6708304	0.55	0.55	0.568	0.567692	0.5219	0.5278	0.366	0.8192	0.4591	0.52	0.47	0.38	0.82	0.5045	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.975264	NA	NA	0.498461	0.767569	ID=COSM1406877;OCCURENCE=1(large_intestine)	0.058	NA	7.1418056
938	20	30915461	30915461	T	C	exonic	KIF3B	NA	synonymous SNV	KIF3B:NM_004798:exon7:c.T1965C:p.Y655Y	exonic	ENSG00000101350	NA	synonymous SNV	ENSG00000101350:ENST00000375712:exon7:c.T1965C:p.Y655Y,ENSG00000101350:ENST00000418717:exon7:c.T843C:p.Y281Y	Score=547;Name=lod=223	NA	20q11.21	Score=777;Name=V$AHR_01	NA	NA	NA	rs1129012	0.22	0.22	0.235	0.201877	0.1859	0.2222	0.1441	0.3313	0.0634	0.18	0.23	0.18	0.32	0.1692	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.0339	NA	NA	0.171047	0.305493	ID=COSM149160;OCCURENCE=1(stomach)	0.355	NA	7.1405196
938	7	149524913	149524913	G	A	exonic	SSPO	NA	nonsynonymous SNV	SSPO:NM_198455:exon105:c.G14821A:p.E4941K	ncRNA_exonic	ENSG00000197558	NA	NA	NA	Score=343;Name=lod=33	NA	7q36.1	Score=767;Name=V$STAT5A_02	NA	NA	NA	rs12534509	0.06	0.06	0.043	0.0469249	0.1292	NA	0.098	0.0129	0.0204	0.12	NA	0.1	0.02	0.0984	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.943223	NA	0.06	0.134103	0.021022	NA	0.087	NA	7.138297
938	17	43008970	43008970	T	C	exonic	KIF18B	NA	nonsynonymous SNV	KIF18B:NM_001264573:exon11:c.A1553G:p.Q518R,KIF18B:NM_001265577:exon11:c.A1517G:p.Q506R	exonic	ENSG00000186185	NA	nonsynonymous SNV	ENSG00000186185:ENST00000438933:exon10:c.A1553G:p.Q518R,ENSG00000186185:ENST00000590129:exon10:c.A1580G:p.Q527R,ENSG00000186185:ENST00000339151:exon11:c.A1553G:p.Q518R,ENSG00000186185:ENST00000587309:exon11:c.A1553G:p.Q518R,ENSG00000186185:ENST00000593135:exon11:c.A1517G:p.Q506R	NA	NA	17q21.31	NA	NA	NA	NA	rs17546822	0.03	0.03	0.025	0.023762	0.0716	NA	0.0274	0.0045	0.0225	0.07	NA	0.03	0.01	0.0523	0.071	.	.	0.001	B	0.002	B	.	.	1.000	N	1.05	L	-0.05	T	-1.094	T	0.013	T	0.128	-0.729	0.879	1.07	0.331	-0.038	2.383	-0.729286	NA	0	0.071292	0.021847	NA	0.022	NA	7.1381414
938	11	121175062	121175062	A	T	intronic	SC5D	NA	NA	NA	exonic	ENSG00000109929	NA	nonsynonymous SNV	ENSG00000109929:ENST00000527762:exon3:c.A224T:p.H75L	NA	NA	11q23.3	NA	NA	NA	NA	rs116993308	0.0037	0.0037	0.004	0.00319489	0.0109	NA	0.0014	NA	0.0041	0.01	NA	NA	NA	0.0072	0.011	0.2	T	.	.	.	.	.	.	1.000	N	.	.	-1.6	D	-0.764	T	0.260	T	0.108	1.255	10.09	-0.119	0.360	-0.074	1.696	1.254932	1.254932	NA	0.0107	0.002043	NA	NA	NA	7.1378667
939	10	134646988	134646988	C	T	exonic	TTC40	NA	nonsynonymous SNV	TTC40:NM_001200049:exon50:c.G6991A:p.A2331T	exonic	ENSG00000171811	NA	nonsynonymous SNV	ENSG00000171811:ENST00000263170:exon12:c.G1474A:p.A492T,ENSG00000171811:ENST00000368586:exon50:c.G6991A:p.A2331T	NA	NA	10q26.3	NA	NA	NA	NA	rs4880433	0.32	0.32	0.299	0.319888	0.3986	0.2788	0.513	0.1399	0.3875	0.39	0.27	0.48	0.14	0.3979	0.48	0.03	D	0.086	B	0.008	B	0.923	N	1.000	P	0.83	L	1.47	T	-0.916	T	0.000	T	0.419	1.14	9.644	1.39	0.305	0.199	7.725	1.139755	NA	0.05	0.402442	0.174989	NA	0.254	NA	7.1343914
939	5	147024509	147024509	C	T	exonic	JAKMIP2	NA	synonymous SNV	JAKMIP2:NM_001270934:exon6:c.G987A:p.R329R,JAKMIP2:NM_001270941:exon6:c.G987A:p.R329R,JAKMIP2:NM_014790:exon6:c.G987A:p.R329R	exonic	ENSG00000176049	NA	synonymous SNV	ENSG00000176049:ENST00000333010:exon5:c.G861A:p.R287R,ENSG00000176049:ENST00000265272:exon6:c.G987A:p.R329R,ENSG00000176049:ENST00000507386:exon6:c.G987A:p.R329R	Score=589;Name=lod=329	NA	5q32	Score=752;Name=V$STAT3_01	NA	NA	NA	rs2116765	0.33	0.33	0.316	0.367812	0.162	0.4712	0.3631	0.5136	0.2791	0.14	0.47	0.3	0.49	0.2342	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.534818	1.534818	NA	0.137791	0.434408	NA	0.362	NA	7.1326756
939	19	3831765	3831765	G	A	exonic	ZFR2	NA	nonsynonymous SNV	ZFR2:NM_015174:exon4:c.C491T:p.S164L	exonic	ENSG00000105278	NA	nonsynonymous SNV	ENSG00000105278:ENST00000262961:exon4:c.C491T:p.S164L,ENSG00000105278:ENST00000438164:exon4:c.C491T:p.S164L	NA	NA	19p13.3	NA	NA	NA	NA	rs2240235	0.41	0.41	0.413	0.367212	0.4195	0.4196	0.4193	0.3858	0.1973	0.41	0.41	0.43	0.4	0.3897	0.43	0.59	T	0.035	B	0.003	B	0.123	N	0.995	P	1.445	L	3.18	T	-0.914	T	0.000	T	0.033	2.839	15.46	2.14	0.552	0.516	6.219	2.839235	2.839235	0.01	0.391965	0.398882	ID=COSM439377;OCCURENCE=1(breast)	0.37	NA	7.1321684
939	1	171956803	171956803	C	T	exonic	DNM3	NA	synonymous SNV	DNM3:NM_001136127:exon3:c.C243T:p.A81A,DNM3:NM_015569:exon3:c.C243T:p.A81A	exonic	ENSG00000197959	NA	synonymous SNV	ENSG00000197959:ENST00000355305:exon3:c.C243T:p.A81A,ENSG00000197959:ENST00000358155:exon3:c.C243T:p.A81A,ENSG00000197959:ENST00000367731:exon3:c.C243T:p.A81A,ENSG00000197959:ENST00000367733:exon3:c.C243T:p.A81A,ENSG00000197959:ENST00000520906:exon3:c.C243T:p.A81A	Score=595;Name=lod=349	NA	1q24.3	Score=849;Name=V$OCT1_02	NA	NA	NA	rs3736790	0.3	0.3	0.323	0.336462	0.164	0.1974	0.2205	0.736	0.1994	0.16	0.2	0.2	0.68	0.2113	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.182168	NA	NA	0.159436	0.611726	NA	0.442	NA	7.1319306
939	6	143081035	143081035	A	G	exonic	HIVEP2	NA	synonymous SNV	HIVEP2:NM_006734:exon9:c.T6390C:p.S2130S	exonic	ENSG00000010818	NA	synonymous SNV	ENSG00000010818:ENST00000012134:exon7:c.T6390C:p.S2130S,ENSG00000010818:ENST00000367604:exon8:c.T6390C:p.S2130S,ENSG00000010818:ENST00000367603:exon9:c.T6390C:p.S2130S	Score=543;Name=lod=215	NA	6q24.2	Score=731;Name=V$PAX4_04	NA	NA	NA	rs9496457	0.12	0.12	0.12	0.116214	0.1889	0.005	0.1182	0.1664	0.0869	0.18	0.01	0.14	0.17	0.1484	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.592179	NA	NA	0.197813	0.145136	NA	0.138	NA	7.1315536
939	14	35592538	35592538	C	G	exonic	KIAA0391	NA	synonymous SNV	KIAA0391:NM_001256678:exon2:c.C87G:p.V29V,KIAA0391:NM_014672:exon2:c.C87G:p.V29V	exonic	ENSG00000100890,ENSG00000258790	NA	synonymous SNV	ENSG00000100890:ENST00000321130:exon2:c.C87G:p.V29V,ENSG00000100890:ENST00000534898:exon2:c.C87G:p.V29V,ENSG00000258790:ENST00000557565:exon2:c.C87G:p.V29V,ENSG00000100890:ENST00000603544:exon2:c.C87G:p.V29V,ENSG00000100890:ENST00000603611:exon2:c.C87G:p.V29V	NA	NA	14q13.2	NA	Name=GATA-2	Name=15	NA	rs941653	0.24	0.24	0.229	0.241813	0.165	0.3542	0.2118	0.2474	0.2188	0.17	0.37	0.18	0.26	0.2009	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.121107	NA	NA	0.169767	0.213118	NA	0.239	NA	7.1309996
939	3	88199298	88199298	T	C	exonic	C3orf38	NA	synonymous SNV	C3orf38:NM_173824:exon1:c.T96C:p.T32T	exonic	ENSG00000179021	NA	synonymous SNV	ENSG00000179021:ENST00000318887:exon1:c.T96C:p.T32T,ENSG00000179021:ENST00000486971:exon1:c.T96C:p.T32T	Score=499;Name=lod=142	NA	3p11.1	Score=680;Name=V$PPARG_02	Name=Pol2-4H8,Pol2,c-Myc	Name=20	NA	rs6551278	0.79	0.79	0.752	0.783347	0.8429	0.8363	0.8516	0.5703	0.907	0.83	0.86	0.87	0.59	0.8413	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.68172	1.68172	NA	0.853372	0.618702	NA	0.674	NA	7.1290946
939	20	13053018	13053018	T	G	exonic	SPTLC3	NA	nonsynonymous SNV	SPTLC3:NM_018327:exon3:c.T418G:p.L140V	exonic	ENSG00000172296	NA	nonsynonymous SNV	ENSG00000172296:ENST00000378194:exon3:c.T418G:p.L140V,ENSG00000172296:ENST00000399002:exon3:c.T418G:p.L140V,ENSG00000172296:ENST00000450297:exon3:c.T337G:p.L113V	NA	NA	20p12.1	NA	NA	NA	NA	rs243887	0.75	0.75	0.775	0.736022	0.7565	0.6052	0.7349	0.9682	0.5368	0.75	0.55	0.77	0.98	0.7138	0.98	0.68	T	0.004	B	0.012	B	0.159	N	0.999	P	0.33	N	-0.35	T	-0.975	T	0.000	T	0.022	0.214	5.154	-6.28	-1.590	-0.808	1.115	0.213945	NA	0.37	0.734214	0.931769	NA	0.826	NA	7.1288194
939	1	204242838	204242838	A	C	exonic	PLEKHA6	NA	synonymous SNV	PLEKHA6:NM_014935:exon3:c.T18G:p.G6G	exonic	ENSG00000143850	NA	synonymous SNV	ENSG00000143850:ENST00000272203:exon3:c.T18G:p.G6G,ENSG00000143850:ENST00000414478:exon3:c.T18G:p.G6G	Score=495;Name=lod=137	NA	1q32.1	Score=873;Name=V$E47_02	NA	NA	NA	rs33911350	0.2	0.2	0.181	0.200479	0.1769	0.2946	0.2406	0.1286	0.1963	0.17	0.26	0.23	0.14	0.1898	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.627396	1.627396	NA	0.171395	0.145483	ID=COSM146743;OCCURENCE=1(stomach)	0.203	NA	7.1285716
939	4	57215677	57215677	G	A	exonic	AASDH	NA	nonsynonymous SNV	AASDH:NM_181806:exon11:c.C2240T:p.A747V	exonic	ENSG00000157426	NA	nonsynonymous SNV	ENSG00000157426:ENST00000434343:exon8:c.C785T:p.A262V,ENSG00000157426:ENST00000513376:exon10:c.C1940T:p.A647V,ENSG00000157426:ENST00000602986:exon10:c.C1781T:p.A594V,ENSG00000157426:ENST00000205214:exon11:c.C2240T:p.A747V,ENSG00000157426:ENST00000451613:exon11:c.C2240T:p.A747V,ENSG00000157426:ENST00000502617:exon11:c.C2240T:p.A747V	NA	NA	4q12	NA	NA	NA	NA	rs3796544	0.28	0.28	0.277	0.277955	0.4155	0.0724	0.2939	0.2829	0.3303	0.42	0.06	0.31	0.28	0.3631	0.43	0.56	T	0.003	B	0.003	B	0.528	N	1.000	P	-1.67	N	2.3	T	-1.052	T	0.000	T	0.069	-1.408	0.022	-10.5	-2.299	-0.527	1.942	-1.407769	NA	0.27	0.426163	0.291648	ID=COSM1131104;OCCURENCE=2(prostate)	0.29	NA	7.1285704
939	1	225142710	225142710	A	T	exonic	DNAH14	NA	nonsynonymous SNV	DNAH14:NM_001145154:exon3:c.A127T:p.T43S,DNAH14:NM_001373:exon3:c.A127T:p.T43S,DNAH14:NM_144989:exon3:c.A127T:p.T43S	exonic	ENSG00000185842	NA	nonsynonymous SNV	ENSG00000185842:ENST00000366848:exon2:c.A127T:p.T43S,ENSG00000185842:ENST00000439375:exon2:c.A127T:p.T43S,ENSG00000185842:ENST00000366849:exon3:c.A127T:p.T43S,ENSG00000185842:ENST00000366850:exon3:c.A127T:p.T43S,ENSG00000185842:ENST00000400952:exon3:c.A127T:p.T43S,ENSG00000185842:ENST00000430092:exon3:c.A127T:p.T43S,ENSG00000185842:ENST00000413949:exon4:c.A127T:p.T43S,ENSG00000185842:ENST00000445597:exon5:c.A658T:p.T220S	NA	NA	1q42.12	NA	NA	NA	NA	rs41267347	0.04	0.04	0.034	0.033746	0.0736	0.0129	0.036	0.0045	0.0521	0.08	0.02	0.04	0.01	0.0596	0.08	0.72	T	0.003	B	0.006	B	0.126	N	1.000	N	.	.	2.55	T	-1.089	T	0.005	T	0.135	-0.57	1.431	-0.167	-0.044	0.016	6.138	-0.570318	NA	0.09	0.071569	0.013588	NA	0.065	NA	7.1285644
939	4	1730215	1730215	C	G	exonic	TACC3	NA	synonymous SNV	TACC3:NM_006342:exon4:c.C1086G:p.G362G	exonic	ENSG00000013810	NA	synonymous SNV	ENSG00000013810:ENST00000313288:exon4:c.C1086G:p.G362G	NA	NA	4p16.3	NA	Name=HA-E2F1	NA	NA	rs798757	0.13	0.13	0.124	0.136182	0.1759	0.0119	0.1225	0.1914	0.1585	0.17	0.01	0.13	0.18	0.1607	0.2	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-1.028	T	0.000	T	.	-0.023	3.894	0.669	0.190	0.159	3.308	-0.023378	NA	NA	0.201628	0.198139	NA	0.043	NA	7.1284386
939	19	49954807	49954807	T	G	exonic	PIH1D1	NA	nonsynonymous SNV	PIH1D1:NM_017916:exon1:c.A25C:p.M9L	exonic	ENSG00000104872	NA	nonsynonymous SNV	ENSG00000104872:ENST00000262265:exon1:c.A25C:p.M9L,ENSG00000104872:ENST00000596049:exon2:c.A25C:p.M9L,ENSG00000104872:ENST00000599366:exon2:c.A25C:p.M9L,ENSG00000104872:ENST00000601825:exon2:c.A25C:p.M9L	NA	NA	19q13.33	NA	Name=NFKB,Pol2	Name=15	NA	rs2293012	0.61	0.61	0.587	0.608826	0.7535	0.4117	0.6124	0.6475	0.6084	0.74	0.39	0.63	0.64	0.6862	0.77	0.5	T	0.0	B	0.0	B	0.680	N	1.000	P	-0.345	N	2.87	T	-1.027	T	0.000	T	0.033	-1.325	0.032	1.33	0.353	0.400	2.806	-1.325226	NA	1	0.765814	0.61734	NA	0.659	NA	7.1278194
939	9	116346287	116346287	C	T	exonic	RGS3	NA	synonymous SNV	RGS3:NM_001276260:exon2:c.C558T:p.Y186Y,RGS3:NM_130795:exon11:c.C1752T:p.Y584Y,RGS3:NM_144488:exon21:c.C2595T:p.Y865Y	exonic	ENSG00000138835	NA	synonymous SNV	ENSG00000138835:ENST00000462143:exon2:c.C558T:p.Y186Y,ENSG00000138835:ENST00000374134:exon3:c.C558T:p.Y186Y,ENSG00000138835:ENST00000343817:exon11:c.C1752T:p.Y584Y,ENSG00000138835:ENST00000350696:exon20:c.C2595T:p.Y865Y,ENSG00000138835:ENST00000374140:exon21:c.C2595T:p.Y865Y	Score=409;Name=lod=61	NA	9q32	NA	Name=ZNF263	NA	NA	rs3810927	0.18	0.18	0.165	0.169728	0.1869	0.2103	0.2421	0.1082	0.1421	0.18	0.22	0.23	0.1	0.171	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.800269	NA	NA	0.183372	0.134135	ID=COSM150682,COSM150681;OCCURENCE=1(stomach)	0.225	NA	7.1253946
939	2	113277949	113277949	T	C	exonic	TTL	NA	synonymous SNV	TTL:NM_153712:exon6:c.T966C:p.D322D	exonic	ENSG00000114999	NA	synonymous SNV	ENSG00000114999:ENST00000233336:exon6:c.T966C:p.D322D	Score=658;Name=lod=627	NA	2q13	NA	Name=c-Myc,Max	NA	NA	rs62157538	0.19	0.19	0.192	0.184305	0.2068	0.2758	0.0937	0.1188	0.2198	0.2	0.3	0.09	0.12	0.1783	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.647197	1.647197	NA	0.156512	0.128007	ID=COSM1398862;OCCURENCE=1(large_intestine)	0.13	NA	7.1250546
940	6	26027135	26027135	G	A	UTR3	HIST1H4B	NM_003544:c.*34C>T	NA	NA	UTR3	ENSG00000124529	ENST00000377364:c.*34C>T	NA	NA	Score=507;Name=lod=153	NA	6p22.2	NA	Name=PAX5-N19,PAX5-C20,HEY1,Pol2-4H8,Sin3Ak-20,Pol2(phosphoS2),Pol2,USF2,ELK4,Pol2(b)	Name=14	Score=269;Name=2016917_0_+_269	rs3752420	0.42	0.42	0.353	0.391773	0.3946	0.7083	0.4496	0.1324	0.3722	0.39	0.72	0.39	0.16	0.4103	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.713498	1.713498	NA	0.403605	0.191557	NA	0.239	NA	7.1248284
940	19	49334991	49334991	C	T	exonic	HSD17B14	NA	synonymous SNV	HSD17B14:NM_016246:exon5:c.G303A:p.E101E	exonic	ENSG00000087076	NA	synonymous SNV	ENSG00000087076:ENST00000595764:exon4:c.G195A:p.E65E,ENSG00000087076:ENST00000263278:exon5:c.G303A:p.E101E	Score=289;Name=lod=20	NA	19q13.33	Score=854;Name=V$COUP_01	NA	NA	NA	rs62127966	0.09	0.09	0.081	0.0656949	0.2048	NA	0.0951	0.0076	0.0481	0.2	NA	0.1	0.01	0.1364	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.928035	NA	NA	0.202326	0.04335	NA	0.116	NA	7.1231406
940	15	85177208	85177208	G	A	ncRNA_exonic	SCAND2P	NA	NA	NA	ncRNA_exonic	ENSG00000176700,ENSG00000254414,ENSG00000254779	NA	NA	NA	Score=548;Name=lod=224	NA	15q25.2	NA	Name=Pol2,CTCF,Sin3Ak-20,HA-E2F1,SUZ12,c-Myc	Name=141	NA	rs698620	0.66	0.66	0.654	0.673123	0.5437	0.8056	0.549	0.7655	0.6329	0.55	0.79	0.54	0.76	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.573641	NA	0.12	NA	NA	NA	0.065	NA	7.1229666
940	11	123777861	123777861	T	C	exonic	OR8D4	NA	synonymous SNV	OR8D4:NM_001005197:exon1:c.T723C:p.C241C	exonic	ENSG00000181518	NA	synonymous SNV	ENSG00000181518:ENST00000321355:exon1:c.T723C:p.C241C	Score=475;Name=lod=114	NA	11q24.1	Score=920;Name=V$LMO2COM_01	NA	NA	NA	rs61748875	0.17	0.17	0.171	0.163339	0.1819	0.0933	0.1398	0.2005	0.183	0.19	0.13	0.15	0.19	0.1718	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.89831	NA	NA	0.190044	0.194596	ID=COSM147344;OCCURENCE=1(stomach)	0.167	NA	7.1229226
940	1	228482028	228482028	G	C	exonic	OBSCN	NA	synonymous SNV	OBSCN:NM_001098623:exon42:c.G11307C:p.L3769L,OBSCN:NM_052843:exon42:c.G11307C:p.L3769L,OBSCN:NM_001271223:exon47:c.G12594C:p.L4198L	exonic	ENSG00000154358	NA	synonymous SNV	ENSG00000154358:ENST00000359599:exon31:c.G7848C:p.L2616L,ENSG00000154358:ENST00000284548:exon42:c.G11307C:p.L3769L,ENSG00000154358:ENST00000366707:exon42:c.G2664C:p.L888L,ENSG00000154358:ENST00000366709:exon42:c.G2664C:p.L888L,ENSG00000154358:ENST00000422127:exon42:c.G11307C:p.L3769L,ENSG00000154358:ENST00000570156:exon47:c.G12594C:p.L4198L	Score=387;Name=lod=50	NA	1q42.13	NA	Name=ZNF263	NA	NA	rs4653547	0.22	0.22	0.191	0.21246	0.164	0.1835	0.2795	0.3139	0.1074	0.17	0.17	0.28	0.31	0.2036	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.707954	1.707954	NA	0.176581	0.29912	NA	0.225	NA	7.1224856
940	21	9907345	9907345	C	T	ncRNA_exonic	TEKT4P2	NA	NA	NA	ncRNA_exonic	ENSG00000188681	NA	NA	NA	Score=547;Name=lod=223	NA	21p11.2	NA	NA	NA	NA	rs3694	NA	NA	0.475	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5448	0.087	.	.	.	.	.	.	.	.	.	.	.	.	.	.	-0.991	T	0.074	T	.	-0.637	1.184	-0.218	-1.484	0.675	3.942	-0.637225	NA	NA	NA	NA	NA	0.08	NA	7.1218666
940	17	39240504	39240504	A	G	exonic	KRTAP4-7	NA	nonsynonymous SNV	KRTAP4-7:NM_033061:exon1:c.A46G:p.S16G	exonic	ENSG00000240871	NA	nonsynonymous SNV	ENSG00000240871:ENST00000391417:exon1:c.A46G:p.S16G	NA	NA	17q21.2	NA	NA	NA	NA	rs11655310	0.54	0.54	0.504	0.621805	0.6153	0.3938	0.6297	0.8873	0.499	0.51	0.34	0.58	0.8	0.5975	0.8	1	T	0.0	B	0.0	B	.	.	1.000	P	.	.	6.35	T	-1.026	T	0.000	T	0.114	-1.989	0.007	2.03	0.103	0.317	3.845	-1.989467	NA	1	NA	NA	ID=COSM979035,COSM979036;OCCURENCE=1(liver),1(endometrium)	NA	NA	7.1205334
940	6	33636907	33636907	C	T	exonic	ITPR3	NA	synonymous SNV	ITPR3:NM_002224:exon18:c.C2163T:p.H721H	exonic	ENSG00000096433	NA	synonymous SNV	ENSG00000096433:ENST00000605930:exon18:c.C2163T:p.H721H,ENSG00000096433:ENST00000374316:exon19:c.C2163T:p.H721H	Score=470;Name=lod=108	NA	6p21.31	NA	Name=c-Myc,Max,USF2,E2F6,PU.1,Mxi1_(bHLH),SMC3_(ab9263)	Name=33	NA	rs2077163	0.46	0.46	0.443	0.490815	0.504	0.5238	0.4827	0.3707	0.6115	0.49	0.48	0.45	0.4	0.5173	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.363307	1.363307	NA	0.526512	0.387426	NA	0.493	NA	7.1188546
940	8	18729459	18729459	T	C	exonic	PSD3	NA	synonymous SNV	PSD3:NM_015310:exon3:c.A915G:p.E305E	exonic	ENSG00000156011	NA	synonymous SNV	ENSG00000156011:ENST00000523619:exon2:c.A720G:p.E240E,ENSG00000156011:ENST00000327040:exon3:c.A915G:p.E305E,ENSG00000156011:ENST00000440756:exon3:c.A915G:p.E305E	Score=479;Name=lod=118	NA	8p22	Score=760;Name=V$STAT5A_02	NA	NA	NA	rs13273954	0.27	0.27	0.272	0.294129	0.171	0.3095	0.2406	0.3691	0.3415	0.18	0.32	0.23	0.4	0.2175	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.018049	NA	NA	0.160423	0.317955	NA	0.188	NA	7.1177436
940	22	43976396	43976396	G	A	exonic	EFCAB6	NA	nonsynonymous SNV	EFCAB6:NM_198856:exon23:c.C2720T:p.A907V,EFCAB6:NM_022785:exon25:c.C3176T:p.A1059V	exonic	ENSG00000186976	NA	nonsynonymous SNV	ENSG00000186976:ENST00000396231:exon23:c.C2720T:p.A907V,ENSG00000186976:ENST00000262726:exon25:c.C3176T:p.A1059V	NA	NA	22q13.2	NA	NA	NA	NA	rs9614382	0.77	0.77	0.741	0.744209	0.7396	0.756	0.8545	0.7799	0.6104	0.73	0.77	0.84	0.76	0.7424	0.84	0.92	T	0.001	B	0.005	B	0.992	N	1.000	P	-0.805	N	2.39	T	-1.002	T	0.000	T	0.047	-1.028	0.222	2.92	0.402	1.849	4.201	-1.027689	NA	1	0.735814	0.747163	NA	0.674	NA	7.1155194
940	17	78172292	78172292	G	A	exonic	CARD14	NA	nonsynonymous SNV	CARD14:NM_052819:exon10:c.G1042A:p.V348I,CARD14:NM_001257970:exon13:c.G1753A:p.V585I,CARD14:NM_024110:exon13:c.G1753A:p.V585I	exonic	ENSG00000141527	NA	nonsynonymous SNV	ENSG00000141527:ENST00000392434:exon10:c.G1042A:p.V348I,ENSG00000141527:ENST00000344227:exon13:c.G1753A:p.V585I,ENSG00000141527:ENST00000570421:exon13:c.G1753A:p.V585I,ENSG00000141527:ENST00000573882:exon15:c.G1753A:p.V585I	NA	NA	17q25.3	NA	NA	NA	NA	rs34367357	0.08	0.08	0.037	0.0780751	0.0646	0.0962	0.1643	0.0227	0.0869	0.07	0.08	0.15	0.02	0.0842	0.15	1	T	0.017	B	0.006	B	0.168	N	1.000	P	-0.09	N	1.18	T	-0.987	T	0.000	T	0.286	-0.767	0.768	-1.35	-0.085	-0.155	9.586	-0.766886	NA	0.28	0.069086	0.031548	NA	0.051	NA	7.1154474
940	2	105977761	105977761	G	A	exonic	FHL2	NA	synonymous SNV	FHL2:NM_001450:exon6:c.C819T:p.P273P,FHL2:NM_201557:exon6:c.C819T:p.P273P,FHL2:NM_001039492:exon7:c.C819T:p.P273P,FHL2:NM_201555:exon8:c.C819T:p.P273P	exonic	ENSG00000115641	NA	synonymous SNV	ENSG00000115641:ENST00000393352:exon6:c.C819T:p.P273P,ENSG00000115641:ENST00000393353:exon6:c.C819T:p.P273P,ENSG00000115641:ENST00000408995:exon6:c.C819T:p.P273P,ENSG00000115641:ENST00000409177:exon6:c.C1167T:p.P389P,ENSG00000115641:ENST00000409807:exon6:c.C819T:p.P273P,ENSG00000115641:ENST00000322142:exon7:c.C819T:p.P273P,ENSG00000115641:ENST00000344213:exon7:c.C1149T:p.P383P,ENSG00000115641:ENST00000358129:exon8:c.C819T:p.P273P	NA	NA	2q12.1	NA	NA	Name=2	NA	rs11124029	0.13	0.13	0.115	0.111422	0.1988	0.0258	0.1614	0.0809	0.1155	0.2	0.03	0.18	0.09	0.1567	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.580214	NA	NA	0.19593	0.102814	NA	0.21	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000041653.1;CLNDSDB=.;CLNDSDBID=.	7.1152366
941	19	52376507	52376507	T	C	exonic	ZNF577	NA	nonsynonymous SNV	ZNF577:NM_001135590:exon7:c.A559G:p.K187E,ZNF577:NM_032679:exon7:c.A736G:p.K246E	exonic	ENSG00000161551	NA	nonsynonymous SNV	ENSG00000161551:ENST00000420592:exon6:c.A559G:p.K187E,ENSG00000161551:ENST00000458390:exon6:c.A736G:p.K246E,ENSG00000161551:ENST00000301399:exon7:c.A736G:p.K246E,ENSG00000161551:ENST00000451628:exon7:c.A559G:p.K187E	NA	NA	19q13.41	NA	Name=ZNF274,SETDB1	NA	NA	rs2288868	0.45	0.45	0.447	0.506589	0.3897	0.3026	0.4553	0.6808	0.638	0.4	0.31	0.48	0.68	0.442	0.68	1	T	0.0	B	0.0	B	.	.	1.000	P	-1.07	N	3.19	T	-0.987	T	0.000	T	0.05	-2.339	0.004	0.885	-0.108	-0.289	7.522	-2.338582	NA	1	0.386744	0.635724	NA	0.594	NA	7.1148894
941	1	223284528	223284528	A	G	exonic	TLR5	NA	nonsynonymous SNV	TLR5:NM_003268:exon6:c.T1846C:p.F616L	exonic	ENSG00000187554	NA	nonsynonymous SNV	ENSG00000187554:ENST00000342210:exon4:c.T1846C:p.F616L,ENSG00000187554:ENST00000540964:exon4:c.T1846C:p.F616L,ENSG00000187554:ENST00000366881:exon6:c.T1846C:p.F616L	NA	NA	1q41	NA	NA	NA	NA	rs5744174	0.28	0.28	0.239	0.290335	0.4095	0.1984	0.3487	0.1089	0.4663	0.41	0.18	0.34	0.14	0.3901	0.42	1	T	0.0	B	0.002	B	0.037	N	1.000	P	-1.06	N	2.29	T	-1.014	T	0.000	T	0.015	-1.889	0.008	-11.2	-3.660	-0.885	12.701	-1.889258	NA	1	0.419767	0.168407	NA	0.217	NA	7.1139664
941	9	312124	312124	T	C	exonic	DOCK8	NA	synonymous SNV	DOCK8:NM_001190458:exon5:c.T495C:p.N165N,DOCK8:NM_001193536:exon5:c.T495C:p.N165N,DOCK8:NM_203447:exon6:c.T699C:p.N233N	exonic	ENSG00000107099	NA	synonymous SNV	ENSG00000107099:ENST00000469391:exon5:c.T495C:p.N165N,ENSG00000107099:ENST00000483757:exon5:c.T495C:p.N165N,ENSG00000107099:ENST00000432829:exon6:c.T495C:p.N165N,ENSG00000107099:ENST00000453981:exon6:c.T699C:p.N233N	Score=391;Name=lod=52	NA	9p24.3	Score=877;Name=V$NFY_01	NA	NA	NA	rs2039045	0.15	0.15	0.126	0.164337	0.1859	0.0099	0.196	0.2542	0.1575	0.17	0.01	0.2	0.22	0.1681	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.446302	1.446302	NA	0.198721	0.251929	NA	0.239	NA	7.1139456
941	5	79030212	79030212	C	T	exonic	CMYA5	NA	nonsynonymous SNV	CMYA5:NM_153610:exon2:c.C5624T:p.A1875V	exonic	ENSG00000164309	NA	nonsynonymous SNV	ENSG00000164309:ENST00000446378:exon2:c.C5624T:p.A1875V	NA	NA	5q14.1	NA	NA	NA	NA	rs16877147	0.15	0.15	0.181	0.126797	0.0606	0.3621	0.036	0.0749	0.0869	0.06	0.41	0.03	0.1	0.093	0.41	1	T	0.01	B	0.005	B	0.330	N	1.000	P	0.46	N	3.14	T	-0.941	T	0.000	T	0.03	1.411	10.65	-1.69	-0.228	0.127	3.546	1.411075	1.411075	0.82	0.065835	0.06044	ID=COSM149870;OCCURENCE=1(stomach)	0.159	NA	7.1138984
941	20	31627291	31627291	A	G	exonic	BPIFB6	NA	nonsynonymous SNV	BPIFB6:NM_174897:exon10:c.A1039G:p.S347G	exonic	ENSG00000167104	NA	nonsynonymous SNV	ENSG00000167104:ENST00000349552:exon10:c.A1039G:p.S347G	NA	NA	20q11.21	NA	NA	NA	NA	rs4911287	0.58	0.58	0.594	0.60643	0.3917	0.7421	0.4827	0.7716	0.5521	0.39	0.72	0.46	0.8	0.4506	0.8	0.67	T	0.0	B	0.0	B	0.477	N	1.000	P	-1.1	N	3.27	T	-1.068	T	0.000	T	0.029	-0.89	0.46	2.02	0.396	0.538	5.958	-0.889715	NA	1	0.377209	0.694507	NA	0.58	NA	7.1138244
941	2	98709684	98709684	T	C	exonic	VWA3B	NA	synonymous SNV	VWA3B:NM_144992:exon2:c.T129C:p.H43H	exonic	ENSG00000168658	NA	synonymous SNV	ENSG00000168658:ENST00000416277:exon2:c.T129C:p.H43H,ENSG00000168658:ENST00000422503:exon2:c.T129C:p.H43H,ENSG00000168658:ENST00000432242:exon2:c.T129C:p.H43H,ENSG00000168658:ENST00000433678:exon2:c.T129C:p.H43H,ENSG00000168658:ENST00000435344:exon2:c.T129C:p.H43H,ENSG00000168658:ENST00000448638:exon2:c.T129C:p.H43H,ENSG00000168658:ENST00000477737:exon2:c.T129C:p.H43H	Score=383;Name=lod=48	NA	2q11.2	NA	NA	Name=4	NA	rs298917	0.12	0.12	0.095	0.106829	0.1938	0.0407	0.1427	0.0877	0.0859	0.2	0.03	0.12	0.08	0.1574	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.126774	NA	NA	0.201778	0.096791	NA	0.087	NA	7.1136886
941	11	5906203	5906203	T	G	exonic	OR52E4	NA	nonsynonymous SNV	OR52E4:NM_001005165:exon1:c.T681G:p.F227L	exonic	ENSG00000180974	NA	nonsynonymous SNV	ENSG00000180974:ENST00000316987:exon1:c.T681G:p.F227L	NA	NA	11p15.4	NA	NA	NA	NA	rs11823828	0.38	0.38	0.348	0.357827	0.4085	0.3641	0.402	0.3207	0.318	0.42	0.36	0.42	0.31	0.3903	0.42	0.18	T	0.035	B	0.107	B	0.000	D	1.000	P	0.825	L	9.26	T	-1.050	T	0.000	T	0.076	1.583	11.25	0.395	0.202	-0.301	5.237	1.582573	1.582573	0.17	0.421904	0.339618	NA	0.355	NA	7.1126294
941	1	232581436	232581436	G	A	exonic	SIPA1L2	NA	synonymous SNV	SIPA1L2:NM_020808:exon9:c.C3192T:p.T1064T	exonic	ENSG00000116991	NA	synonymous SNV	ENSG00000116991:ENST00000308942:exon3:c.C414T:p.T138T,ENSG00000116991:ENST00000262861:exon9:c.C3192T:p.T1064T,ENSG00000116991:ENST00000366630:exon10:c.C3192T:p.T1064T	Score=582;Name=lod=310	NA	1q42.2	Score=975;Name=V$MYCMAX_02	NA	NA	NA	rs12757779	0.1	0.1	0.079	0.0892572	0.1889	0.001	0.1657	0.0363	0.0951	0.18	NA	0.17	0.04	0.1582	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.375917	1.375917	NA	0.207382	0.067788	NA	0.174	NA	7.1121846
941	7	930689	930689	C	T	exonic	GET4	NA	synonymous SNV	GET4:NM_015949:exon5:c.C591T:p.A197A	exonic	ENSG00000239857	NA	synonymous SNV	ENSG00000239857:ENST00000426056:exon3:c.C474T:p.A158A,ENSG00000239857:ENST00000407192:exon4:c.C432T:p.A144A,ENSG00000239857:ENST00000265857:exon5:c.C591T:p.A197A,ENSG00000239857:ENST00000412734:exon5:c.C432T:p.A144A	Score=594;Name=lod=347	NA	7p22.3	Score=816;Name=V$GRE_C	NA	NA	NA	rs13171	0.21	0.21	0.164	0.201078	0.1879	0.2669	0.2435	0.0862	0.272	0.18	0.31	0.23	0.1	0.2001	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.657758	1.657758	NA	0.16686	0.099183	ID=COSM453587;OCCURENCE=1(breast)	0.145	NA	7.1118066
941	15	42442823	42442823	G	C	exonic	PLA2G4F	NA	nonsynonymous SNV	PLA2G4F:NM_213600:exon8:c.C754G:p.L252V	exonic	ENSG00000168907	NA	nonsynonymous SNV	ENSG00000168907:ENST00000382396:exon8:c.C754G:p.L252V,ENSG00000168907:ENST00000397272:exon8:c.C754G:p.L252V,ENSG00000168907:ENST00000569985:exon8:c.C689G:p.A230G	NA	NA	15q15.1	NA	NA	NA	NA	rs73403546	0.17	0.17	0.159	0.214856	0.0507	0.1131	0.3069	0.4349	0.1258	0.04	0.09	0.25	0.4	0.1139	0.4	0.3	T	0.001	B	0.0	B	0.690	N	1.000	P	1.1	L	4.97	T	-1.002	T	0.000	T	0.025	-0.231	2.887	-1.99	-0.451	0.211	5.748	-0.230561	NA	0.2	0.057572	0.373355	NA	0.196	NA	7.1111614
941	9	130698043	130698043	A	G	exonic	DPM2	NA	synonymous SNV	DPM2:NM_003863:exon4:c.T213C:p.Y71Y	exonic	ENSG00000136908	NA	synonymous SNV	ENSG00000136908:ENST00000314392:exon4:c.T213C:p.Y71Y	Score=410;Name=lod=62	NA	9q34.11	NA	Name=MafK_(ab50322),eGFP-GATA2,eGFP-JunD,Pol2,GATA-1	Name=38	NA	rs6781	0.76	0.76	0.724	0.73103	0.8728	0.6498	0.8833	0.6498	0.6708	0.87	0.62	0.86	0.69	0.8139	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.872309	NA	NA	0.869535	0.681117	NA	0.79	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116900.1;CLNDSDB=.;CLNDSDBID=.	7.1104316
941	17	62019103	62019103	G	T	exonic	SCN4A	NA	synonymous SNV	SCN4A:NM_000334:exon24:c.C4539A:p.I1513I	exonic	ENSG00000007314	NA	synonymous SNV	ENSG00000007314:ENST00000435607:exon24:c.C4539A:p.I1513I,ENSG00000007314:ENST00000578147:exon24:c.C4539A:p.I1513I	Score=614;Name=lod=417	NA	17q23.3	NA	NA	NA	NA	rs56342400	0.16	0.16	0.154	0.140176	0.1968	0.1062	0.1254	0.1452	0.1207	0.19	0.12	0.13	0.18	0.1639	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.447905	NA	NA	0.195698	0.133227	ID=COSM148317;OCCURENCE=1(stomach)	0.181	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000078661.2;CLNDSDB=.;CLNDSDBID=.	7.1102686
941	8	87755955	87755955	A	T	upstream	CNGB3	NA	NA	NA	ncRNA_intronic	ENSG00000254115	NA	NA	NA	Score=473;Name=lod=112	NA	8q21.3	Score=895;Name=V$S8_01	NA	Name=4	NA	rs62622781	0.03	0.03	0.027	0.0169728	0.0567	NA	0.0144	0.0015	0.0164	0.06	NA	0.02	0.0041	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5.330764	5.330764	NA	NA	NA	NA	0.014	NA	7.1099666
941	3	129293256	129293256	T	C	exonic	PLXND1	NA	nonsynonymous SNV	PLXND1:NM_015103:exon12:c.A2608G:p.M870V	exonic	ENSG00000004399	NA	nonsynonymous SNV	ENSG00000004399:ENST00000324093:exon12:c.A2608G:p.M870V,ENSG00000004399:ENST00000393239:exon12:c.A2608G:p.M870V	Score=458;Name=lod=97	NA	3q22.1	NA	NA	NA	NA	rs2255703	0.48	0.48	0.487	0.511981	0.4115	0.5109	0.3559	0.7247	0.4397	0.4	0.48	0.36	0.68	0.4201	0.68	0.45	T	0.0	B	0.0	B	0.392	N	0.762	P	-1.5	N	1.63	T	-0.991	T	0.000	T	0.031	-2.338	0.004	0.907	0.076	0.079	2.019	-2.338084	NA	1	0.39181	0.670754	ID=COSM1418855;OCCURENCE=1(large_intestine)	0.543	NA	7.1099234
941	7	103155864	103155864	A	G	exonic	RELN	NA	synonymous SNV	RELN:NM_005045:exon50:c.T7887C:p.P2629P,RELN:NM_173054:exon50:c.T7887C:p.P2629P	exonic	ENSG00000189056	NA	synonymous SNV	ENSG00000189056:ENST00000343529:exon50:c.T7887C:p.P2629P,ENSG00000189056:ENST00000424685:exon50:c.T7887C:p.P2629P,ENSG00000189056:ENST00000428762:exon50:c.T7887C:p.P2629P	Score=531;Name=lod=192	NA	7q22.1	NA	NA	NA	NA	rs56345626	0.19	0.19	0.18	0.17492	0.1849	0.254	0.1513	0.1339	0.1554	0.2	0.27	0.15	0.12	0.1816	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.409005	1.409005	NA	0.191047	0.127099	NA	0.13	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118171.2;CLNDSDB=.;CLNDSDBID=.	7.1091196
941	14	94935566	94935566	G	A	exonic	SERPINA9	NA	synonymous SNV	SERPINA9:NM_175739:exon2:c.C666T:p.N222N,SERPINA9:NM_001042518:exon3:c.C366T:p.N122N	exonic	ENSG00000170054	NA	synonymous SNV	ENSG00000170054:ENST00000337425:exon2:c.C666T:p.N222N,ENSG00000170054:ENST00000380365:exon2:c.C612T:p.N204N,ENSG00000170054:ENST00000448305:exon2:c.C372T:p.N124N,ENSG00000170054:ENST00000546329:exon2:c.C558T:p.N186N,ENSG00000170054:ENST00000298845:exon3:c.C366T:p.N122N,ENSG00000170054:ENST00000424550:exon3:c.C219T:p.N73N	Score=492;Name=lod=133	NA	14q32.13	Score=1000;Name=V$AML1_01	NA	NA	NA	rs4900231	0.15	0.15	0.155	0.117612	0.2097	0.1796	0.121	0.0068	0.1063	0.22	0.2	0.12	0.01	0.1556	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.060659	NA	NA	0.192345	0.034287	NA	0.116	NA	7.1090216
941	18	13826508	13826508	C	T	exonic	MC5R	NA	synonymous SNV	MC5R:NM_005913:exon1:c.C744T:p.T248T	exonic	ENSG00000176136	NA	synonymous SNV	ENSG00000176136:ENST00000324750:exon1:c.C744T:p.T248T	Score=554;Name=lod=237	NA	18p11.21	NA	NA	NA	Score=54;Name=1060167.5_0_+_54	rs2236701	0.27	0.27	0.25	0.264377	0.173	0.3433	0.3573	0.3109	0.1483	0.17	0.37	0.3	0.28	0.2066	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.206722	NA	NA	0.178605	0.28552	NA	0.196	NA	7.1084616
941	2	20101487	20101487	G	A	exonic	TTC32	NA	synonymous SNV	TTC32:NM_001008237:exon1:c.C129T:p.S43S	exonic	ENSG00000183891	NA	synonymous SNV	ENSG00000183891:ENST00000333610:exon1:c.C129T:p.S43S,ENSG00000183891:ENST00000402414:exon1:c.C129T:p.S43S	NA	NA	2p24.1	NA	Name=Pol2-4H8,TR4,BRCA1_(C-1863),Sin3Ak-20,TAF7_(SQ-8),Pol2(phosphoS2),TCF4,Pol2,ZBTB33,CTCFL_(SC-98982),TAF1,ETS1,GTF2F1_(RAP-74),CHD2_(N-1250),BAF155,TBP,GTF2B,Nrf1,CTCF,FOXA2_(SC-6554),HEY1	Name=148	NA	rs2304589	0.24	0.24	0.231	0.281749	0.175	0.4028	0.2305	0.208	0.4029	0.16	0.41	0.21	0.2	0.2214	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.733129	NA	NA	0.16186	0.205175	NA	0.174	NA	7.1084066
941	15	89422286	89422286	C	T	exonic	HAPLN3	NA	synonymous SNV	HAPLN3:NM_178232:exon4:c.G708A:p.P236P	exonic	ENSG00000140511	NA	synonymous SNV	ENSG00000140511:ENST00000359595:exon4:c.G708A:p.P236P,ENSG00000140511:ENST00000562889:exon5:c.G894A:p.P298P	NA	NA	15q26.1	Score=849;Name=V$HAND1E47_01	NA	Name=108	NA	rs3809574	0.21	0.21	0.201	0.202276	0.1779	0.2292	0.2032	0.236	0.1534	0.17	0.23	0.21	0.24	0.2101	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.194362	NA	NA	0.170441	0.238356	ID=COSM330323;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.246	NA	7.1082256
941	15	90260145	90260145	T	A	exonic	WDR93	NA	nonsynonymous SNV	WDR93:NM_020212:exon7:c.T760A:p.S254T	exonic	ENSG00000140527	NA	nonsynonymous SNV	ENSG00000140527:ENST00000268130:exon7:c.T760A:p.S254T,ENSG00000140527:ENST00000560294:exon7:c.T760A:p.S254T	NA	NA	15q26.1	NA	NA	NA	NA	rs7163367	0.35	0.35	0.358	0.3752	0.3956	0.2044	0.3112	0.4766	0.4387	0.39	0.23	0.35	0.41	0.3914	0.51	1	T	0.0	B	0.0	B	0.399	N	1.000	P	-1.79	N	2.01	T	-0.989	T	0.000	T	0.033	-1.739	0.011	-2.28	-0.913	-0.435	0.951	-1.739211	NA	1	0.440568	0.471364	ID=COSM1178437;OCCURENCE=1(prostate)	0.529	NA	7.1057654
941	8	124553222	124553222	G	C	exonic	FBXO32	NA	synonymous SNV	FBXO32:NM_001242463:exon1:c.C33G:p.P11P,FBXO32:NM_058229:exon1:c.C33G:p.P11P	exonic	ENSG00000156804	NA	synonymous SNV	ENSG00000156804:ENST00000443022:exon1:c.C33G:p.P11P,ENSG00000156804:ENST00000517956:exon1:c.C33G:p.P11P	Score=643;Name=lod=547	NA	8q24.13	Score=800;Name=V$COMP1_01	NA	NA	NA	rs4871385	0.14	0.14	0.073	0.121206	0.1968	0.0218	0.196	0.1301	0.0808	0.2	0.02	0.2	0.13	0.1759	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.81538	1.81538	NA	0.188953	0.13465	NA	0.022	NA	7.1050136
942	20	55949872	55949872	G	T	ncRNA_intronic	MIR5095	NA	NA	NA	exonic	ENSG00000101146	NA	synonymous SNV	ENSG00000101146:ENST00000527947:exon11:c.G1035T:p.G345G	NA	NA	20q13.31	NA	Name=Max	Name=11	NA	rs41310034	0.01	0.01	NA	0.00938498	0.0219	NA	0.0072	0.0015	0.0184	0.02	NA	0.01	NA	0.0177	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.121498	NA	NA	0.022442	0.004085	NA	0.072	NA	7.1046246
942	1	197070776	197070776	C	T	exonic	ASPM	NA	synonymous SNV	ASPM:NM_018136:exon18:c.G7605A:p.V2535V	exonic	ENSG00000066279	NA	synonymous SNV	ENSG00000066279:ENST00000367409:exon18:c.G7605A:p.V2535V	NA	Name=End-stage coagulation	1q31.3	NA	NA	NA	NA	rs10922162	0.29	0.29	0.23	0.294928	0.172	0.6696	0.428	0.0159	0.318	0.16	0.65	0.34	0.02	0.2396	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.238317	NA	NA	0.151036	0.044278	NA	0.21	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=Primary_autosomal_recessive_microcephaly_5|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000020793.1|RCV000123702.1;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet|.;CLNDSDBID=NBK9587:C1837501:608716:ORPHA2512|.	7.1040306
942	7	100028484	100028484	T	C	exonic	MEPCE	NA	synonymous SNV	MEPCE:NM_019606:exon1:c.T843C:p.S281S	exonic	ENSG00000146834	NA	synonymous SNV	ENSG00000146834:ENST00000310512:exon1:c.T843C:p.S281S	NA	NA	7q22.1	NA	Name=Pol2,TBP,ZNF263,Pol2-4H8	Name=67	NA	rs6962151	0.15	0.15	0.158	0.161142	0.1948	0.0218	0.1326	0.2943	0.1104	0.19	0.01	0.12	0.27	0.1705	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.211853	NA	NA	0.197907	0.284385	NA	0.246	NA	7.1034596
942	12	130839165	130839165	G	A	exonic	PIWIL1	NA	synonymous SNV	PIWIL1:NM_001190971:exon10:c.G1128A:p.L376L,PIWIL1:NM_004764:exon10:c.G1128A:p.L376L	exonic	ENSG00000125207	NA	synonymous SNV	ENSG00000125207:ENST00000245255:exon10:c.G1128A:p.L376L	NA	NA	12q24.33	Score=675;Name=V$P53_01	NA	Name=3	NA	rs10848087	0.17	0.17	0.141	0.185304	0.1928	0.1012	0.1138	0.2564	0.2188	0.18	0.12	0.14	0.24	0.1778	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.465513	NA	NA	0.192907	0.220835	NA	0.217	NA	7.1031596
942	20	47267480	47267480	A	G	exonic	PREX1	NA	synonymous SNV	PREX1:NM_020820:exon23:c.T2769C:p.C923C	exonic	ENSG00000124126	NA	synonymous SNV	ENSG00000124126:ENST00000371941:exon23:c.T2769C:p.C923C,ENSG00000124126:ENST00000396220:exon23:c.T2769C:p.C923C	Score=489;Name=lod=129	NA	20q13.13	Score=896;Name=V$TAL1ALPHAE47_01	NA	NA	NA	rs41283556	0.14	0.14	0.115	0.150759	0.1849	0.1528	0.2118	0.0197	0.2474	0.18	0.15	0.22	0.03	0.1901	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.154464	NA	NA	0.188837	0.056968	NA	0.123	NA	7.1028296
942	11	64645871	64645871	A	G	exonic	EHD1	NA	synonymous SNV	EHD1:NM_006795:exon1:c.T66C:p.A22A	exonic	ENSG00000110047	NA	synonymous SNV	ENSG00000110047:ENST00000320631:exon1:c.T66C:p.A22A,ENSG00000110047:ENST00000411683:exon2:c.T66C:p.A22A,ENSG00000110047:ENST00000433803:exon2:c.T108C:p.A36A,ENSG00000110047:ENST00000457202:exon2:c.T66C:p.A22A,ENSG00000110047:ENST00000359393:exon3:c.T66C:p.A22A	Score=658;Name=lod=631	NA	11q13.1	Score=762;Name=V$NRSF_01	Name=Pol2(b),Ini1,Sin3Ak-20,ZNF263,Pol2-4H8,CTCFL_(SC-98982),Pol2,BAF155	Name=30	NA	rs1211284	0.67	0.67	0.621	0.64976	0.8777	0.5615	0.817	0.3396	0.8067	0.89	0.55	0.81	0.38	0.8085	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.054893	2.054893	NA	0.878985	0.451159	NA	0.645	NA	7.1014816
942	6	31084964	31084964	T	C	exonic	CDSN	NA	nonsynonymous SNV	CDSN:NM_001264:exon2:c.A428G:p.N143S	exonic	ENSG00000204539	NA	nonsynonymous SNV	ENSG00000204539:ENST00000376288:exon2:c.A428G:p.N143S	NA	NA	6p21.33	NA	NA	Name=48	NA	rs3130984	0.8	0.8	0.812	0.834465	0.7356	0.875	0.7666	0.913	0.8364	0.72	0.86	0.73	0.91	0.7639	0.91	1	T	0.0	B	0.0	B	0.318	N	1.000	P	-1.59	N	3.79	T	-0.963	T	0.001	T	0.018	-1.299	0.038	0.77	-0.023	-1.156	5.029	-1.298628	NA	1	0.732547	0.887774	NA	0.449	NA	7.1012864
942	5	79028513	79028513	A	G	exonic	CMYA5	NA	nonsynonymous SNV	CMYA5:NM_153610:exon2:c.A3925G:p.I1309V	exonic	ENSG00000164309	NA	nonsynonymous SNV	ENSG00000164309:ENST00000446378:exon2:c.A3925G:p.I1309V	NA	NA	5q14.1	NA	NA	NA	NA	rs16877133	0.21	0.21	0.238	0.180911	0.0596	0.3621	0.0476	0.2738	0.0879	0.06	0.41	0.04	0.33	0.1073	0.41	0.83	T	0.296	B	0.041	B	0.168	N	1.000	P	1.245	L	0.98	T	-1.009	T	0.000	T	0.013	-0.699	0.975	-0.636	-0.083	0.326	6.877	-0.699017	NA	0.29	0.065969	0.224038	ID=COSM149867;OCCURENCE=1(stomach)	0.21	NA	7.1004644
942	5	79028586	79028586	C	T	exonic	CMYA5	NA	nonsynonymous SNV	CMYA5:NM_153610:exon2:c.C3998T:p.A1333V	exonic	ENSG00000164309	NA	nonsynonymous SNV	ENSG00000164309:ENST00000446378:exon2:c.C3998T:p.A1333V	NA	NA	5q14.1	NA	NA	NA	NA	rs16877135	0.21	0.21	0.254	0.180911	0.0596	0.3621	0.0476	0.2738	0.0879	0.06	0.41	0.04	0.33	0.1075	0.41	0.39	T	0.057	B	0.041	B	0.271	N	1.000	P	0.68	N	1.25	T	-0.911	T	0.000	T	0.039	1.189	9.831	1.33	0.404	-0.710	3.791	1.188536	NA	0.16	0.065895	0.223782	NA	0.21	NA	7.1003384
942	14	69262433	69262433	C	T	intronic	ZFP36L1	NA	NA	NA	UTR3	ENSG00000185650	ENST00000408913:c.*78G>A	NA	NA	Score=417;Name=lod=66	NA	14q24.1	NA	Name=p300,Oct-2,MEF2A,Pol2,POU2F2,TAF1,TBP,NFKB,AP-2gamma,Pol2-4H8,ZNF263,HA-E2F1,FOXA1_(C-20)	Name=144	NA	rs76356898	0.03	0.03	0.029	0.0205671	0.0666	0.002	0.0403	0.0015	0.0041	0.05	0.0017	0.04	0.002	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.813632	NA	NA	NA	NA	NA	0.007	NA	7.1000667
942	5	79032711	79032711	G	A	exonic	CMYA5	NA	nonsynonymous SNV	CMYA5:NM_153610:exon2:c.G8123A:p.R2708H	exonic	ENSG00000164309	NA	nonsynonymous SNV	ENSG00000164309:ENST00000446378:exon2:c.G8123A:p.R2708H	NA	NA	5q14.1	NA	NA	NA	NA	rs28362542	0.21	0.21	0.243	0.181709	0.0596	0.3621	0.0476	0.2769	0.0879	0.06	0.41	0.04	0.33	0.1078	0.41	1	T	0.0	B	0.0	B	.	.	1.000	P	-0.6	N	2.46	T	-0.923	T	0.000	T	0.061	-0.673	1.06	0.521	0.068	-0.775	3.108	-0.673237	NA	1	0.066324	0.234418	NA	0.21	NA	7.0996094
942	3	14745857	14745857	G	A	exonic	C3orf20	NA	nonsynonymous SNV	C3orf20:NM_001184957:exon7:c.G526A:p.A176T,C3orf20:NM_001184958:exon7:c.G526A:p.A176T,C3orf20:NM_032137:exon7:c.G892A:p.A298T	exonic	ENSG00000131379	NA	nonsynonymous SNV	ENSG00000131379:ENST00000253697:exon7:c.G892A:p.A298T,ENSG00000131379:ENST00000412910:exon7:c.G526A:p.A176T,ENSG00000131379:ENST00000435614:exon7:c.G526A:p.A176T	NA	NA	3p25.1	NA	NA	NA	NA	rs17040196	0.41	0.41	0.423	0.376997	0.4175	0.3155	0.4553	0.4236	0.2802	0.42	0.31	0.43	0.47	0.3922	0.47	0.6	T	0.017	B	0.011	B	0.284	N	1.000	P	0.805	L	3.43	T	-0.916	T	0.000	T	0.018	-0.924	0.39	-3.04	-0.525	-0.499	10.785	-0.923774	NA	0.42	0.425233	0.430776	NA	0.449	NA	7.0984004
942	20	47267940	47267940	G	A	exonic	PREX1	NA	synonymous SNV	PREX1:NM_020820:exon22:c.C2649T:p.T883T	exonic	ENSG00000124126	NA	synonymous SNV	ENSG00000124126:ENST00000371941:exon22:c.C2649T:p.T883T,ENSG00000124126:ENST00000396220:exon22:c.C2649T:p.T883T	Score=490;Name=lod=131	NA	20q13.13	Score=890;Name=V$NF1_Q6	NA	NA	NA	rs61748372	0.14	0.14	0.117	0.150759	0.1849	0.1528	0.2118	0.0197	0.2474	0.18	0.15	0.22	0.03	0.1953	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.084477	NA	NA	0.188488	0.056514	NA	0.123	NA	7.0979786
942	19	49950298	49950298	C	T	exonic	PIH1D1	NA	nonsynonymous SNV	PIH1D1:NM_017916:exon7:c.G670A:p.V224I	exonic	ENSG00000104872	NA	nonsynonymous SNV	ENSG00000104872:ENST00000262265:exon7:c.G670A:p.V224I,ENSG00000104872:ENST00000601807:exon7:c.G637A:p.V213I,ENSG00000104872:ENST00000596049:exon8:c.G670A:p.V224I	Score=496;Name=lod=138	NA	19q13.33	NA	NA	NA	NA	rs13394	0.68	0.68	0.699	0.688898	0.7545	0.4177	0.6441	0.9274	0.6104	0.74	0.39	0.66	0.92	0.7139	0.92	1	T	0.0	B	0.002	B	0.000	N	1.000	P	-0.02	N	2.36	T	-0.964	T	0.000	T	0.027	-0.82	0.623	2.67	0.425	0.159	5.949	-0.820476	NA	1	0.767093	0.8931	NA	0.797	NA	7.0978404
942	11	124440617	124440617	C	T	exonic	OR8A1	NA	nonsynonymous SNV	OR8A1:NM_001005194:exon1:c.C653T:p.S218L	exonic	ENSG00000196119	NA	nonsynonymous SNV	ENSG00000196119:ENST00000284287:exon1:c.C653T:p.S218L	NA	NA	11q24.2	NA	NA	NA	NA	rs12792184	0.79	0.79	0.793	0.772564	0.7316	0.8929	0.7651	0.7375	0.7434	0.73	0.91	0.76	0.8	0.7606	0.91	0.46	T	0.0	B	0.0	B	0.777	N	1.000	P	-0.29	N	8.89	T	-0.903	T	0.000	T	0.036	-0.925	0.389	5.03	0.930	1.166	7.381	-0.924621	NA	0.57	0.745755	0.760336	NA	0.826	NA	7.0953784
942	5	148206917	148206917	C	A	exonic	ADRB2	NA	synonymous SNV	ADRB2:NM_000024:exon1:c.C523A:p.R175R	exonic	ENSG00000169252	NA	synonymous SNV	ENSG00000169252:ENST00000305988:exon1:c.C523A:p.R175R	Score=568;Name=lod=272	NA	5q32	Score=767;Name=V$MIF1_01	NA	NA	NA	rs1042718	0.27	0.27	0.295	0.297724	0.169	0.369	0.2882	0.3381	0.3088	0.18	0.38	0.25	0.31	0.2326	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.264643	NA	NA	0.17	0.322061	NA	0.21	NA	7.0950666
942	2	197662526	197662526	T	C	exonic	GTF3C3	NA	nonsynonymous SNV	GTF3C3:NM_001206774:exon2:c.A209G:p.N70S,GTF3C3:NM_012086:exon2:c.A209G:p.N70S	exonic	ENSG00000119041	NA	nonsynonymous SNV	ENSG00000119041:ENST00000263956:exon2:c.A209G:p.N70S,ENSG00000119041:ENST00000409364:exon2:c.A209G:p.N70S	NA	NA	2q33.1	NA	NA	NA	NA	rs11559078	0.09	0.09	0.087	0.115415	0.0775	0.0327	0.0735	0.1944	0.1626	0.08	0.04	0.09	0.15	0.0907	0.17	0.96	T	0.0	B	0.003	B	0.070	N	1.000	P	0.345	N	1.05	T	-1.020	T	0.000	T	0.005	1.182	9.807	0.442	-0.055	-0.003	5.038	1.182136	NA	0.71	0.070116	0.170222	ID=COSM149034;OCCURENCE=1(stomach)	0.203	NA	7.0950174
943	11	1628965	1628965	G	A	exonic	KRTAP5-3	NA	synonymous SNV	KRTAP5-3:NM_001012708:exon1:c.C651T:p.S217S	exonic	ENSG00000196224	NA	synonymous SNV	ENSG00000196224:ENST00000399685:exon1:c.C651T:p.S217S	Score=412;Name=lod=63	NA	11p15.5	Score=921;Name=V$LMO2COM_01	NA	Name=7	NA	rs57186801	0.49	0.49	0.472	0.46266	0.5239	0.3889	0.4524	0.4962	0.4376	0.54	0.4	0.44	0.54	0.5033	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.115079	NA	NA	0.545941	0.492961	NA	0.196	NA	7.0935256
943	15	68624290	68624290	G	A	exonic	ITGA11	NA	synonymous SNV	ITGA11:NM_001004439:exon14:c.C1677T:p.D559D	exonic	ENSG00000137809	NA	synonymous SNV	ENSG00000137809:ENST00000315757:exon14:c.C1677T:p.D559D,ENSG00000137809:ENST00000423218:exon14:c.C1677T:p.D559D	Score=493;Name=lod=135	NA	15q23	Score=956;Name=V$ATF6_01	NA	NA	NA	rs2292745	0.26	0.26	0.212	0.272764	0.1869	0.5079	0.2882	0.0499	0.409	0.2	0.53	0.25	0.05	0.2369	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.86617	NA	NA	0.150048	0.068147	NA	0.13	NA	7.0928186
943	7	2290522	2290522	C	T	exonic	NUDT1	NA	synonymous SNV	NUDT1:NM_002452:exon4:c.C357T:p.D119D,NUDT1:NM_198953:exon4:c.C357T:p.D119D,NUDT1:NM_198954:exon4:c.C426T:p.D142D,NUDT1:NM_198948:exon5:c.C357T:p.D119D,NUDT1:NM_198949:exon5:c.C426T:p.D142D,NUDT1:NM_198950:exon5:c.C357T:p.D119D,NUDT1:NM_198952:exon5:c.C426T:p.D142D	exonic	ENSG00000106268	NA	synonymous SNV	ENSG00000106268:ENST00000339737:exon4:c.C357T:p.D119D,ENSG00000106268:ENST00000343985:exon4:c.C426T:p.D142D,ENSG00000106268:ENST00000356714:exon4:c.C357T:p.D119D,ENSG00000106268:ENST00000397046:exon5:c.C357T:p.D119D,ENSG00000106268:ENST00000397048:exon5:c.C426T:p.D142D,ENSG00000106268:ENST00000397049:exon5:c.C426T:p.D142D	Score=449;Name=lod=89	NA	7p22.3	Score=806;Name=V$CMYB_01	NA	NA	NA	rs1799832	0.15	0.15	0.147	0.148962	0.2087	0.0625	0.2061	0.0968	0.2065	0.2	0.08	0.21	0.1	0.1767	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.99694	NA	NA	0.188837	0.115751	NA	0.101	NA	7.0924296
943	6	17688693	17688693	C	T	exonic	NUP153	NA	nonsynonymous SNV	NUP153:NM_005124:exon2:c.G268A:p.D90N	exonic	ENSG00000124789	NA	nonsynonymous SNV	ENSG00000124789:ENST00000262077:exon2:c.G268A:p.D90N,ENSG00000124789:ENST00000537253:exon2:c.G268A:p.D90N	NA	NA	6p22.3	NA	NA	NA	NA	rs16879902	0.06	0.06	0.052	0.061901	0.0636	0.0704	0.1095	0.0166	0.0787	0.06	0.06	0.1	0.02	0.0866	0.1	0.93	T	0.026	B	0.007	B	0.003	N	1.000	P	1.245	L	3.2	T	-0.908	T	0.005	T	0.046	-0.504	1.689	1.34	-0.060	-0.108	7.985	-0.50448	NA	0.57	0.091279	0.034271	NA	0.051	NA	7.0918544
943	14	24769663	24769663	T	G	exonic	NOP9	NA	synonymous SNV	NOP9:NM_174913:exon2:c.T297G:p.A99A	exonic	ENSG00000196943	NA	synonymous SNV	ENSG00000196943:ENST00000267425:exon2:c.T297G:p.A99A,ENSG00000196943:ENST00000396802:exon2:c.T297G:p.A99A	Score=507;Name=lod=154	NA	14q12	NA	Name=ZNF263	NA	NA	rs11158632	0.15	0.15	0.133	0.150359	0.1849	0.004	0.3473	0.1581	0.1155	0.2	0.01	0.3	0.15	0.1835	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.679381	1.679381	NA	0.206977	0.167045	NA	0.13	NA	7.0912896
943	21	46057548	46057548	A	C	exonic	KRTAP10-10	NA	nonsynonymous SNV	KRTAP10-10:NM_181688:exon1:c.A214C:p.T72P	exonic	ENSG00000221859	NA	nonsynonymous SNV	ENSG00000221859:ENST00000380095:exon1:c.A214C:p.T72P	NA	NA	21q22.3	NA	Name=CTCF	NA	NA	rs4818947	0.77	0.77	0.744	0.778355	0.7704	0.6786	0.7464	0.8744	0.7822	0.77	0.66	0.77	0.89	0.7504	0.89	1	T	0.0	B	0.0	B	.	.	1.000	P	-2.45	N	5.48	T	-1.061	T	0.000	T	0.088	-2.958	0.001	2.32	0.053	.	4.095	-2.957708	NA	1	0.722791	0.855197	NA	0.659	NA	7.0897424
943	10	96997820	96997820	A	G	exonic	PDLIM1	NA	synonymous SNV	PDLIM1:NM_020992:exon7:c.T852C:p.Y284Y	exonic	ENSG00000107438	NA	synonymous SNV	ENSG00000107438:ENST00000329399:exon7:c.T852C:p.Y284Y	Score=655;Name=lod=612	NA	10q23.33	NA	NA	Name=43	NA	rs1049814	0.17	0.17	0.155	0.173123	0.1769	0.0724	0.2594	0.2073	0.1656	0.19	0.08	0.21	0.22	0.1986	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.839557	NA	NA	0.202907	0.186564	NA	0.246	NA	7.0882596
943	11	6502780	6502780	C	A	exonic	TIMM10B	NA	synonymous SNV	TIMM10B:NM_012192:exon1:c.C34A:p.R12R	exonic	ENSG00000132286,ENSG00000265264	NA	synonymous SNV	ENSG00000132286:ENST00000254616:exon1:c.C34A:p.R12R,ENSG00000265264:ENST00000464330:exon1:c.C34A:p.R12R,ENSG00000265264:ENST00000472836:exon1:c.C34A:p.R12R,ENSG00000132286:ENST00000530751:exon1:c.C34A:p.R12R,ENSG00000132286:ENST00000531462:exon1:c.C34A:p.R12R,ENSG00000132286:ENST00000533379:exon1:c.C34A:p.R12R	Score=488;Name=lod=128	NA	11p15.4	NA	Name=Pol2,SP1,Mxi1_(bHLH),PU.1,Pol2(phosphoS2),YY1_(C-20),TAF7_(SQ-8),TR4,E2F6,TAF1,SREBP1,GATA-1,E2F6_(H-50),ETS1,SP2_(SC-643),POU2F2,HMGN3,GABP,GTF2F1_(RAP-74),CHD2_(N-1250),Max,ELF1_(SC-631),Oct-2,YY1,Sin3Ak-20,Pol2-4H8,FOSL2,Nrf1,USF-1,TBP,IRF1,c-Myc,CCNT2,NFKB,HEY1,SREBP2,PAX5-N19,PAX5-C20	NA	NA	rs11555935	0.16	0.16	0.168	0.167133	0.1839	0.0327	0.1686	0.2118	0.227	0.19	0.04	0.15	0.24	0.2013	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.321069	NA	NA	0.194018	0.206724	NA	0.283	NA	7.0874486
943	11	65271832	65271832	C	T	ncRNA_exonic	MALAT1	NA	NA	NA	ncRNA_exonic	ENSG00000251562	NA	NA	NA	Score=580;Name=lod=303	NA	11q13.1	NA	Name=Pol2-4H8,Egr-1,Pol2(b),GATA2_(CG2-96),USF-1,HEY1,BCLAF1_(M33-P5B11),TAF7_(SQ-8),Pol2,Pol2(phosphoS2),TAF1,CHD2_(N-1250),CEBPB	Name=139	NA	rs3200401	0.17	0.17	0.176	0.143171	0.2018	0.1766	0.1268	0.1074	0.1084	0.19	0.19	0.16	0.12	0.1659	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.860229	1.860229	NA	0.212022	0.136728	NA	0.123	NA	7.0869446
943	1	161161284	161161284	G	C	exonic	ADAMTS4	NA	nonsynonymous SNV	ADAMTS4:NM_005099:exon9:c.C2158G:p.P720A	exonic	ENSG00000158859	NA	nonsynonymous SNV	ENSG00000158859:ENST00000367996:exon9:c.C2158G:p.P720A	NA	NA	1q23.3	NA	NA	NA	NA	rs41270041	0.07	0.07	0.076	0.0996406	0.0726	0.0665	0.0677	0.1157	0.1626	0.07	0.06	0.06	0.1	0.0934	0.12	0.06	T	0.001	B	0.01	B	0.018	N	1.000	P	0.695	N	0.8	T	-1.076	T	0.027	T	0.061	-0.248	2.807	0.261	0.182	0.003	1.524	-0.247892	NA	0.14	0.08093	0.121425	NA	0.072	NA	7.0864034
943	8	82727569	82727569	T	C	exonic	SNX16	NA	synonymous SNV	SNX16:NM_152837:exon4:c.A585G:p.E195E,SNX16:NM_152836:exon5:c.A672G:p.E224E,SNX16:NM_022133:exon6:c.A672G:p.E224E	exonic	ENSG00000104497	NA	synonymous SNV	ENSG00000104497:ENST00000353788:exon4:c.A585G:p.E195E,ENSG00000104497:ENST00000345957:exon5:c.A672G:p.E224E,ENSG00000104497:ENST00000396330:exon6:c.A672G:p.E224E	Score=644;Name=lod=550	NA	8q21.13	Score=831;Name=V$COMP1_01	NA	NA	NA	rs16909651	0.16	0.16	0.148	0.156949	0.1978	0.1974	0.147	0.0144	0.273	0.21	0.2	0.18	0.02	0.1973	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.356874	2.356874	NA	0.186047	0.043577	ID=COSM1458382;OCCURENCE=1(large_intestine)	0.116	NA	7.0855196
943	20	33586193	33586193	C	T	exonic	MYH7B	NA	synonymous SNV	MYH7B:NM_020884:exon33:c.C3969T:p.S1323S	exonic	ENSG00000078814	NA	synonymous SNV	ENSG00000078814:ENST00000262873:exon31:c.C3969T:p.S1323S	NA	NA	20q11.22	Score=887;Name=V$CREB_Q4	NA	Name=9	NA	rs3746436	0.16	0.16	0.187	0.171126	0.1938	0.1071	0.1311	0.1551	0.2638	0.2	0.12	0.15	0.16	0.1947	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.786156	NA	NA	0.192865	0.152254	NA	0.268	NA	7.0853016
944	9	116356529	116356529	C	G	exonic	RGS3	NA	nonsynonymous SNV	RGS3:NM_144489:exon1:c.C330G:p.C110W	exonic	ENSG00000138835	NA	nonsynonymous SNV	ENSG00000138835:ENST00000462403:exon1:c.C330G:p.C110W	NA	NA	9q32	NA	Name=CTCF,TAF1,TAF7_(SQ-8),NRSF,Pol2,HEY1,Pol2(b),Pol2-4H8	NA	NA	rs10817493	0.83	0.83	0.822	0.835863	0.7376	0.9881	0.8127	0.8048	0.8384	0.73	0.99	0.8	0.82	0.7857	0.99	0.09	T	0.0	B	0.0	B	.	.	1.000	P	0	N	0.27	T	-0.987	T	0.000	T	0.024	-2.721	0	-3.7	-0.367	0.721	0.421	-2.721434	NA	1	0.725105	0.784189	NA	0.783	NA	7.0849284
944	11	130784488	130784488	A	G	exonic	SNX19	NA	synonymous SNV	SNX19:NM_014758:exon1:c.T1347C:p.I449I	exonic	ENSG00000120451	NA	synonymous SNV	ENSG00000120451:ENST00000265909:exon1:c.T1347C:p.I449I,ENSG00000120451:ENST00000533214:exon1:c.T1347C:p.I449I	Score=428;Name=lod=73	NA	11q24.3	Score=859;Name=V$NFE2_01	NA	NA	NA	rs61734874	0.14	0.14	0.149	0.127596	0.1988	0.1538	0.0893	0.0492	0.1605	0.2	0.17	0.1	0.05	0.1752	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.136558	NA	NA	0.208052	0.071558	NA	0.217	NA	7.0846146
944	12	52635360	52635360	G	A	exonic	KRT7	NA	synonymous SNV	KRT7:NM_005556:exon5:c.G798A:p.A266A	exonic	ENSG00000135480	NA	synonymous SNV	ENSG00000135480:ENST00000331817:exon5:c.G798A:p.A266A	Score=385;Name=lod=49	NA	12q13.13	Score=823;Name=V$HNF4_01_B	Name=CTCF,CTCF_(SC-5916)	NA	NA	rs999665	0.41	0.41	0.425	0.423722	0.5378	0.3145	0.4366	0.3714	0.4806	0.54	0.29	0.43	0.35	0.4941	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.589422	NA	NA	0.551047	0.424648	ID=COSM147517;OCCURENCE=1(stomach)	0.413	NA	7.0837196
944	14	51383432	51383432	G	A	exonic	PYGL	NA	synonymous SNV	PYGL:NM_001163940:exon8:c.C918T:p.D306D,PYGL:NM_002863:exon9:c.C1020T:p.D340D	exonic	ENSG00000100504	NA	synonymous SNV	ENSG00000100504:ENST00000544180:exon8:c.C918T:p.D306D,ENSG00000100504:ENST00000216392:exon9:c.C1020T:p.D340D,ENSG00000100504:ENST00000532462:exon9:c.C1020T:p.D340D	Score=512;Name=lod=160	NA	14q22.1	NA	NA	NA	Score=62;Name=711483_0_+_62	rs2075643	0.25	0.25	0.226	0.235423	0.1829	0.4365	0.3501	0.0431	0.2607	0.19	0.44	0.34	0.06	0.2253	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.357268	1.357268	NA	0.174767	0.066727	NA	0.159	NA	7.0836996
944	12	25242595	25242595	C	G	exonic	LRMP	NA	nonsynonymous SNV	LRMP:NM_001204126:exon10:c.C421G:p.L141V,LRMP:NM_001204127:exon10:c.C421G:p.L141V,LRMP:NM_006152:exon11:c.C421G:p.L141V	exonic	ENSG00000118308	NA	nonsynonymous SNV	ENSG00000118308:ENST00000536173:exon7:c.C262G:p.L88V,ENSG00000118308:ENST00000547044:exon10:c.C421G:p.L141V,ENSG00000118308:ENST00000548766:exon10:c.C421G:p.L141V,ENSG00000118308:ENST00000354454:exon11:c.C421G:p.L141V,ENSG00000118308:ENST00000361433:exon11:c.C421G:p.L141V	Score=385;Name=lod=49	NA	12p12.1	NA	NA	NA	NA	rs7969931	0.74	0.74	0.752	0.735423	0.7416	0.8968	0.7594	0.5832	0.7515	0.73	0.87	0.76	0.61	0.7455	0.87	1	T	0.009	B	0.003	B	0.142	N	1.000	P	0	N	2.55	T	-0.981	T	0.000	T	0.059	0.357	5.936	4.3	0.891	0.925	7.240	0.356803	NA	0.83	0.763488	0.609623	NA	0.616	NA	7.0827454
944	1	1991014	1991014	A	G	exonic	PRKCZ	NA	synonymous SNV	PRKCZ:NM_002744:exon4:c.A318G:p.P106P	exonic	ENSG00000067606	NA	synonymous SNV	ENSG00000067606:ENST00000468310:exon3:c.A228G:p.P76P,ENSG00000067606:ENST00000378567:exon4:c.A318G:p.P106P,ENSG00000067606:ENST00000503297:exon4:c.A180G:p.P60P	Score=389;Name=lod=51	NA	1p36.33	NA	Name=GABP	NA	NA	rs1878745	0.24	0.24	0.208	0.23762	0.1928	0.4752	0.2032	0.0719	0.2873	0.18	0.48	0.2	0.09	0.2079	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.816307	NA	NA	0.184535	0.091693	ID=COSM146379,COSM146380;OCCURENCE=1(stomach)	0.188	NA	7.0814316
944	13	43597706	43597706	C	T	UTR5	DNAJC15	NM_013238:c.-57C>T	NA	NA	UTR5	ENSG00000120675	ENST00000379221:c.-57C>T	NA	NA	Score=313;Name=lod=25	NA	13q14.11	NA	Name=Pol2(b),HNF4A_(H-171),Egr-1,YY1,Pol2-4H8,HA-E2F1,NFKB,c-Myc,PAX5-C20,TBP,TAF1,ZBTB33,HNF4A,TCF4,NRSF,Pol2,YY1_(C-20),ELF1_(SC-631),HNF4G_(SC-6558)	Name=140	NA	rs17553284	0.15	0.15	0.129	0.117412	0.2525	0.0843	0.1859	0.0129	0.1053	0.26	0.09	0.19	0.02	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.81017	NA	NA	NA	NA	NA	0.087	NA	7.0808334
944	3	180334623	180334623	C	T	exonic	CCDC39	NA	synonymous SNV	CCDC39:NM_181426:exon17:c.G2397A:p.V799V	exonic	ENSG00000145075	NA	synonymous SNV	ENSG00000145075:ENST00000442201:exon17:c.G2397A:p.V799V	Score=435;Name=lod=78	NA	3q26.33	Score=813;Name=V$FREAC3_01	NA	NA	NA	rs7612917	0.15	0.15	0.114	0.13139	0.2147	0.002	0.2061	0.1536	0.0961	0.23	NA	0.2	0.16	0.1764	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.104073	NA	NA	0.195449	0.15124	NA	0.174	NA	7.0801176
944	8	145059425	145059425	T	C	exonic	PARP10	NA	nonsynonymous SNV	PARP10:NM_032789:exon5:c.A745G:p.I249V	exonic	ENSG00000178685	NA	nonsynonymous SNV	ENSG00000178685:ENST00000313059:exon4:c.A490G:p.I164V,ENSG00000178685:ENST00000525773:exon4:c.A781G:p.I261V,ENSG00000178685:ENST00000313028:exon5:c.A745G:p.I249V,ENSG00000178685:ENST00000524918:exon5:c.A745G:p.I249V,ENSG00000178685:ENST00000527262:exon5:c.A745G:p.I249V	NA	NA	8q24.3	NA	NA	NA	NA	rs11136344	0.38	0.38	0.401	0.391174	0.4314	0.1458	0.2795	0.6165	0.3773	0.42	0.15	0.32	0.63	0.3994	0.63	1	T	0.0	B	0.0	B	0.328	N	1.000	P	-1.445	N	3.15	T	-0.975	T	0.000	T	0.14	-2.465	0.003	-0.575	-0.436	-1.973	3.492	-2.464539	NA	1	0.423256	0.596459	NA	0.391	NA	7.0792774
944	5	32090294	32090294	G	A	exonic	PDZD2	NA	nonsynonymous SNV	PDZD2:NM_178140:exon19:c.G6740A:p.R2247Q	exonic	ENSG00000133401	NA	nonsynonymous SNV	ENSG00000133401:ENST00000282493:exon19:c.G6740A:p.R2247Q,ENSG00000133401:ENST00000438447:exon20:c.G6740A:p.R2247Q	NA	NA	5p13.3	NA	NA	NA	NA	rs10066063	0.12	0.12	0.105	0.116014	0.0746	0.2351	0.1412	0.0431	0.1166	0.07	0.26	0.11	0.04	0.0924	0.26	0.65	T	0.026	B	0.005	B	0.859	N	1.000	P	0.805	L	3.41	T	-0.905	T	0.000	T	0.016	-0.585	1.375	0.432	0.145	0.560	3.709	-0.584903	NA	1	0.089186	0.054698	NA	0.072	NA	7.0771474
944	19	4216910	4216910	G	A	exonic	ANKRD24	NA	nonsynonymous SNV	ANKRD24:NM_133475:exon18:c.G1753A:p.E585K	exonic	ENSG00000089847	NA	nonsynonymous SNV	ENSG00000089847:ENST00000262970:exon16:c.G2023A:p.E675K,ENSG00000089847:ENST00000597689:exon16:c.G1666A:p.E556K,ENSG00000089847:ENST00000318934:exon17:c.G1753A:p.E585K,ENSG00000089847:ENST00000600132:exon18:c.G1753A:p.E585K	NA	NA	19p13.3	NA	Name=Egr-1,BAF155	NA	NA	rs10413818	0.73	0.73	0.744	0.711661	0.7386	0.8006	0.7896	0.5484	0.7577	0.74	0.81	0.78	0.57	0.7513	0.81	0.36	T	0.053	B	0.008	B	0.020	N	1.000	P	0	N	1.1	T	-0.965	T	0.000	T	0.054	0.712	7.795	-2.9	-0.490	0.170	9.384	0.712444	NA	0.07	0.767081	0.635386	NA	0.58	NA	7.0763524
944	17	39883672	39883672	G	A	intronic	HAP1	NA	NA	NA	exonic	ENSG00000173805	NA	nonsynonymous SNV	ENSG00000173805:ENST00000310778:exon9:c.C1309T:p.R437W	Score=371;Name=lod=43	NA	17q21.2	NA	NA	NA	NA	rs11867808	0.27	0.27	0.283	0.249002	0.3956	0.1667	0.2378	0.2534	0.1851	0.38	0.13	0.28	0.23	0.3045	0.39	0	D	0.005	B	0.003	B	.	.	0.000	P	.	.	2.19	T	-0.942	T	0.000	T	0.262	0.804	8.23	1.24	0.015	0.626	5.629	0.80438	NA	NA	0.390349	0.275306	NA	0.319	NA	7.0762177
944	11	126278075	126278075	C	T	exonic	ST3GAL4	NA	synonymous SNV	ST3GAL4:NM_001254759:exon5:c.C420T:p.Y140Y,ST3GAL4:NM_001254757:exon7:c.C423T:p.Y141Y,ST3GAL4:NM_001254758:exon7:c.C423T:p.Y141Y,ST3GAL4:NM_006278:exon7:c.C411T:p.Y137Y	exonic	ENSG00000110080	NA	nonsynonymous SNV	ENSG00000110080:ENST00000531217:exon6:c.C362T:p.T121M	Score=510;Name=lod=158	NA	11q24.2	Score=920;Name=V$HOXA3_01	NA	NA	NA	rs2230279	0.38	0.38	0.342	0.344848	0.3101	0.5079	0.3256	0.3623	0.2025	0.31	0.49	0.32	0.39	0.3139	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.100962	NA	NA	0.300372	0.351204	NA	0.471	NA	7.075628
944	13	75876389	75876389	G	A	exonic	TBC1D4	NA	synonymous SNV	TBC1D4:NM_014832:exon16:c.C2901T:p.L967L	exonic	ENSG00000136111	NA	synonymous SNV	ENSG00000136111:ENST00000377625:exon14:c.C2712T:p.L904L,ENSG00000136111:ENST00000425511:exon15:c.C393T:p.L131L,ENSG00000136111:ENST00000431480:exon15:c.C2877T:p.L959L,ENSG00000136111:ENST00000377636:exon16:c.C2901T:p.L967L	NA	NA	13q22.2	NA	Name=p300,FOXA2_(SC-6554),FOXA1_(SC-101058),GATA3_(SC-268),TCF4,HDAC2_(SC-6296),FOXA1_(C-20)	Name=18	NA	rs2297208	0.39	0.39	0.392	0.369209	0.5527	0.1528	0.4986	0.2927	0.4151	0.56	0.16	0.49	0.3	0.4911	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.766852	NA	NA	0.547579	0.341826	NA	0.464	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118590.2;CLNDSDB=.;CLNDSDBID=.	7.0752876
945	15	90245174	90245174	T	A	exonic	WDR93	NA	nonsynonymous SNV	WDR93:NM_020212:exon2:c.T197A:p.L66H	exonic	ENSG00000140527	NA	nonsynonymous SNV	ENSG00000140527:ENST00000268130:exon2:c.T197A:p.L66H,ENSG00000140527:ENST00000558000:exon2:c.T197A:p.L66H,ENSG00000140527:ENST00000560294:exon2:c.T197A:p.L66H	NA	NA	15q26.1	Score=884;Name=V$TAL1ALPHAE47_01	NA	NA	NA	rs4287542	0.36	0.36	0.372	0.391973	0.4026	0.2063	0.3617	0.5061	0.4397	0.4	0.22	0.39	0.44	0.4089	0.5	0.59	T	0.043	B	0.022	B	0.235	N	1.000	P	0.255	N	1.97	T	-0.927	T	0.000	T	0.151	-0.513	1.654	0.074	0.039	-0.054	1.699	-0.513158	NA	0.3	0.447546	0.486591	NA	0.522	NA	7.0742874
945	17	1795180	1795180	T	C	exonic	RPA1	NA	synonymous SNV	RPA1:NM_002945:exon15:c.T1605C:p.S535S	exonic	ENSG00000132383	NA	synonymous SNV	ENSG00000132383:ENST00000574049:exon6:c.T696C:p.S232S,ENSG00000132383:ENST00000254719:exon15:c.T1605C:p.S535S	Score=575;Name=lod=290	NA	17p13.3	Score=864;Name=V$STAT5A_01	NA	NA	NA	rs2230931	0.25	0.25	0.228	0.29393	0.1799	0.252	0.304	0.3654	0.3507	0.17	0.25	0.27	0.36	0.2344	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.271232	1.271232	NA	0.178256	0.355651	NA	0.225	NA	7.0741106
945	1	160062472	160062472	C	T	exonic	IGSF8	NA	synonymous SNV	IGSF8:NM_052868:exon5:c.G1326A:p.E442E,IGSF8:NM_001206665:exon6:c.G1326A:p.E442E	exonic	ENSG00000162729	NA	synonymous SNV	ENSG00000162729:ENST00000314485:exon5:c.G1326A:p.E442E,ENSG00000162729:ENST00000368086:exon5:c.G1326A:p.E442E	Score=410;Name=lod=62	NA	1q23.2	Score=860;Name=V$ZID_01	NA	NA	NA	rs2295622	0.17	0.17	0.133	0.154553	0.1869	0.2252	0.2507	0.0189	0.1636	0.19	0.21	0.22	0.03	0.2091	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.207111	NA	NA	0.197237	0.040812	NA	0.283	NA	7.0734296
945	3	173997153	173997153	G	A	exonic	NLGN1	NA	synonymous SNV	NLGN1:NM_014932:exon6:c.G1362A:p.K454K	exonic	ENSG00000169760	NA	synonymous SNV	ENSG00000169760:ENST00000545397:exon4:c.G1362A:p.K454K,ENSG00000169760:ENST00000361589:exon5:c.G1362A:p.K454K,ENSG00000169760:ENST00000401917:exon6:c.G1482A:p.K494K,ENSG00000169760:ENST00000457714:exon6:c.G1362A:p.K454K	Score=778;Name=lod=1933	NA	3q26.31	Score=858;Name=V$FOXJ2_02	NA	NA	NA	rs7646919	0.17	0.17	0.169	0.188299	0.1978	0.0933	0.1441	0.2421	0.2352	0.2	0.09	0.17	0.24	0.2001	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.275898	NA	NA	0.195349	0.238765	ID=COSM1420692;OCCURENCE=1(large_intestine)	0.275	NA	7.0734176
945	10	129907489	129907489	G	A	exonic	MKI67	NA	nonsynonymous SNV	MKI67:NM_001145966:exon12:c.C1535T:p.A512V,MKI67:NM_002417:exon13:c.C2615T:p.A872V	exonic	ENSG00000148773	NA	nonsynonymous SNV	ENSG00000148773:ENST00000368653:exon12:c.C1535T:p.A512V,ENSG00000148773:ENST00000368654:exon13:c.C2615T:p.A872V	NA	NA	10q26.2	NA	NA	NA	NA	rs2853344	0.04	0.04	0.04	0.038139	0.0944	NA	0.0605	0.0008	0.0542	0.09	0.0017	0.05	0.0041	0.068	0.098	0.67	T	0.001	B	0.002	B	0.096	N	1.000	P	0.205	N	5.07	T	-0.919	T	0.000	T	0.027	-1.571	0.014	-0.808	-0.602	0.308	4.370	-1.571386	NA	1	0.098023	0.018611	NA	0.051	NA	7.0729104
945	2	135711657	135711657	G	A	exonic	CCNT2	NA	synonymous SNV	CCNT2:NM_001241:exon9:c.G1632A:p.K544K,CCNT2:NM_058241:exon9:c.G1632A:p.K544K	exonic	ENSG00000082258	NA	synonymous SNV	ENSG00000082258:ENST00000264157:exon9:c.G1632A:p.K544K,ENSG00000082258:ENST00000295238:exon9:c.G1632A:p.K544K,ENSG00000082258:ENST00000537343:exon10:c.G1107A:p.K369K	Score=640;Name=lod=534	NA	2q21.3	Score=859;Name=V$IK1_01	Name=PU.1	NA	NA	rs3814354	0.69	0.69	0.706	0.702077	0.5457	0.877	0.6225	0.6641	0.7904	0.53	0.9	0.64	0.72	0.58	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.620655	NA	NA	0.468256	0.636178	ID=COSM1179790,COSM1399489;OCCURENCE=1(prostate),1(large_intestine)	0.558	NA	7.0727106
945	10	73537978	73537978	C	T	exonic	CDH23	NA	synonymous SNV	CDH23:NM_022124:exon38:c.C5100T:p.Y1700Y	exonic	ENSG00000107736	NA	synonymous SNV	ENSG00000107736:ENST00000224721:exon39:c.C5115T:p.Y1705Y	Score=551;Name=lod=232	NA	10q22.1	NA	NA	NA	NA	rs10762480	0.18	0.18	0.17	0.179313	0.2097	0.2004	0.1556	0.1755	0.1483	0.21	0.18	0.14	0.18	0.188	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.119096	NA	NA	0.196543	0.184198	ID=COSM427855;OCCURENCE=1(breast)	0.116	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000039199.1|RCV000124199.1;CLNDSDB=.|.;CLNDSDBID=.|.	7.0724236
945	12	6030302	6030302	T	C	exonic	ANO2	NA	synonymous SNV	ANO2:NM_020373:exon3:c.A426G:p.G142G	exonic	ENSG00000047617	NA	synonymous SNV	ENSG00000047617:ENST00000327087:exon3:c.A426G:p.G142G,ENSG00000047617:ENST00000356134:exon3:c.A426G:p.G142G,ENSG00000047617:ENST00000546188:exon3:c.A426G:p.G142G	Score=304;Name=lod=23	NA	12p13.31	Score=727;Name=V$PPARG_01	NA	NA	NA	rs3741902	0.16	0.16	0.115	0.147364	0.2147	0.1855	0.1427	0.0363	0.1922	0.21	0.18	0.17	0.03	0.1768	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.200224	NA	NA	0.202975	0.072732	NA	0.08	NA	7.0721916
945	7	43540887	43540887	A	C	exonic	HECW1	NA	synonymous SNV	HECW1:NM_015052:exon21:c.A3597C:p.R1199R	exonic	ENSG00000002746	NA	synonymous SNV	ENSG00000002746:ENST00000453890:exon19:c.A3495C:p.R1165R,ENSG00000002746:ENST00000395891:exon21:c.A3597C:p.R1199R	Score=663;Name=lod=659	NA	7p13	Score=843;Name=V$GR_Q6	NA	NA	NA	rs17339479	0.12	0.12	0.107	0.116414	0.2068	0.0079	0.1499	0.0696	0.1748	0.22	0.01	0.18	0.06	0.1849	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.910207	NA	NA	0.20303	0.076346	ID=COSM1131579;OCCURENCE=1(prostate)	0.174	NA	7.0719366
945	7	149517978	149517978	G	T	exonic	SSPO	NA	nonsynonymous SNV	SSPO:NM_198455:exon87:c.G12321T:p.Q4107H	ncRNA_exonic	ENSG00000197558	NA	NA	NA	Score=452;Name=lod=92	NA	7q36.1	Score=801;Name=V$PAX5_02	NA	NA	NA	rs12536873	0.16	0.16	0.141	0.145168	0.1372	0.2361	0.1383	0.1324	0.0818	0.13	0.22	0.13	0.15	0.1472	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.129975	NA	0.01	0.143769	0.132783	ID=COSN231373;OCCURENCE=1(skin)	0.188	NA	7.071831
945	16	75646576	75646576	G	T	exonic	ADAT1	NA	nonsynonymous SNV	ADAT1:NM_012091:exon7:c.C608A:p.T203N	exonic	ENSG00000065457	NA	nonsynonymous SNV	ENSG00000065457:ENST00000307921:exon7:c.C608A:p.T203N	NA	NA	16q23.1	NA	NA	NA	NA	rs3743599	0.26	0.26	0.228	0.266174	0.0427	0.6935	0.3444	0.0068	0.3507	0.04	0.73	0.31	0.01	0.1672	0.73	0.49	T	0.326	B	0.091	B	0.000	U	1.000	P	1.845	L	2.58	T	-0.948	T	0.000	T	0.063	0.025	4.141	0.828	0.292	0.070	3.318	0.024573	NA	0.75	0.052093	0.020018	NA	0.138	NA	7.0713404
945	20	33578251	33578251	A	G	ncRNA_exonic	MIR499A,MIR499B	NA	NA	NA	ncRNA_exonic	ENSG00000207635	NA	NA	NA	Score=628;Name=lod=475	NA	20q11.22	Score=839;Name=V$FOXO1_02	NA	NA	Score=243;Name=1420973_0_+_243	rs3746444	0.18	0.18	0.186	0.183506	0.1938	0.1448	0.134	0.1694	0.2669	0.2	0.17	0.16	0.18	0.2013	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.757965	2.757965	NA	0.201145	0.181441	NA	0.29	NA	7.0704216
945	12	53294381	53294381	T	C	exonic	KRT8	NA	synonymous SNV	KRT8:NM_002273:exon4:c.A681G:p.L227L,KRT8:NM_001256282:exon5:c.A765G:p.L255L,KRT8:NM_001256293:exon5:c.A681G:p.L227L	exonic	ENSG00000170421	NA	synonymous SNV	ENSG00000170421:ENST00000547176:exon2:c.A171G:p.L57L,ENSG00000170421:ENST00000293308:exon4:c.A681G:p.L227L,ENSG00000170421:ENST00000546900:exon4:c.A330G:p.L110L,ENSG00000170421:ENST00000546897:exon5:c.A681G:p.L227L,ENSG00000170421:ENST00000552150:exon5:c.A765G:p.L255L,ENSG00000170421:ENST00000552551:exon5:c.A681G:p.L227L,ENSG00000170421:ENST00000546826:exon6:c.A681G:p.L227L,ENSG00000170421:ENST00000548998:exon6:c.A801G:p.L267L	Score=539;Name=lod=207	NA	12q13.13	NA	Name=Pol2	NA	NA	rs8608	0.54	0.54	0.542	0.567492	0.5318	0.6042	0.6182	0.3986	0.7587	0.51	0.64	0.57	0.46	0.553	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.286947	NA	NA	0.511512	0.435769	NA	0.399	CLINSIG=untested;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000056941.1;CLNDSDB=.;CLNDSDBID=.	7.0703546
945	9	27556780	27556780	G	A	exonic	C9orf72	NA	synonymous SNV	C9orf72:NM_001256054:exon8:c.C870T:p.S290S,C9orf72:NM_018325:exon8:c.C870T:p.S290S	exonic	ENSG00000147894	NA	synonymous SNV	ENSG00000147894:ENST00000380003:exon8:c.C870T:p.S290S	Score=582;Name=lod=310	Name=Amyotrophic lateral sclerosis	9p21.2	NA	NA	NA	NA	rs10122902	0.21	0.21	0.197	0.226438	0.162	0.3016	0.2781	0.1513	0.2802	0.16	0.31	0.25	0.16	0.2362	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.011093	NA	NA	0.198721	0.19133	NA	0.225	NA	7.0697456
945	7	154672646	154672646	T	C	exonic	DPP6	NA	synonymous SNV	DPP6:NM_001039350:exon21:c.T1935C:p.F645F,DPP6:NM_001936:exon21:c.T1941C:p.F647F,DPP6:NM_130797:exon21:c.T2127C:p.F709F	exonic	ENSG00000130226	NA	synonymous SNV	ENSG00000130226:ENST00000427557:exon19:c.T1806C:p.F602F,ENSG00000130226:ENST00000332007:exon21:c.T1941C:p.F647F,ENSG00000130226:ENST00000377770:exon21:c.T2127C:p.F709F,ENSG00000130226:ENST00000404039:exon21:c.T1935C:p.F645F	Score=474;Name=lod=113	NA	7q36.2	Score=950;Name=V$LYF1_01	NA	NA	NA	rs3817522	0.26	0.26	0.231	0.264976	0.1879	0.1002	0.3963	0.4902	0.1166	0.18	0.13	0.36	0.45	0.2303	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.793712	NA	NA	0.178875	0.417963	NA	0.232	NA	7.0695916
945	6	150342232	150342232	G	A	exonic	RAET1L	NA	nonsynonymous SNV	RAET1L:NM_130900:exon3:c.C440T:p.T147I	exonic	ENSG00000155918	NA	nonsynonymous SNV	ENSG00000155918:ENST00000286380:exon3:c.C440T:p.T147I,ENSG00000155918:ENST00000367341:exon3:c.C440T:p.T147I	NA	NA	6q25.1	NA	NA	NA	NA	rs2282236	0.34	0.34	0.339	0.329073	0.4394	0.2401	0.2925	0.3033	0.3681	0.45	0.22	0.34	0.31	0.3789	0.45	0.32	T	0.001	B	0.002	B	.	.	1.000	P	-0.255	N	5.79	T	-1.036	T	0.000	T	0.043	-2.509	0.003	-0.819	-0.646	-1.278	2.170	-2.509455	NA	0.87	0.446395	0.312074	NA	0.312	NA	7.0686384
945	8	24261526	24261526	A	G	exonic	ADAMDEC1	NA	nonsynonymous SNV	ADAMDEC1:NM_001145272:exon12:c.A1094G:p.N365S,ADAMDEC1:NM_014479:exon13:c.A1331G:p.N444S,ADAMDEC1:NM_001145271:exon14:c.A1094G:p.N365S	exonic	ENSG00000134028	NA	nonsynonymous SNV	ENSG00000134028:ENST00000522298:exon12:c.A1094G:p.N365S,ENSG00000134028:ENST00000256412:exon13:c.A1331G:p.N444S,ENSG00000134028:ENST00000538205:exon14:c.A1094G:p.N365S	NA	NA	8p21.2	NA	NA	NA	NA	rs3765124	0.29	0.29	0.268	0.294928	0.4284	0.2044	0.4553	0.0968	0.4049	0.43	0.21	0.42	0.09	0.3941	0.44	0.39	T	0.929	P	0.458	P	0.146	N	1.000	P	1.54	L	2.76	T	-0.902	T	0.000	T	0.02	1.119	9.564	0.414	-0.144	0.317	8.043	1.119311	NA	0	0.442326	0.153654	NA	0.21	NA	7.0685074
945	5	79351735	79351735	C	T	exonic	THBS4	NA	synonymous SNV	THBS4:NM_003248:exon3:c.C420T:p.S140S	exonic	ENSG00000113296	NA	synonymous SNV	ENSG00000113296:ENST00000350881:exon3:c.C420T:p.S140S,ENSG00000113296:ENST00000511733:exon3:c.C147T:p.S49S	NA	NA	5q14.1	NA	Name=EBF	Name=12	NA	rs423906	0.26	0.26	0.246	0.283546	0.1988	0.2183	0.3127	0.3714	0.2986	0.19	0.24	0.3	0.37	0.2243	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.756898	NA	NA	0.175465	0.350431	NA	0.188	NA	7.0681016
945	4	69095197	69095197	T	C	exonic	TMPRSS11B	NA	nonsynonymous SNV	TMPRSS11B:NM_182502:exon8:c.A724G:p.I242V	exonic	ENSG00000185873	NA	nonsynonymous SNV	ENSG00000185873:ENST00000332644:exon8:c.A724G:p.I242V	NA	NA	4q13.2	NA	NA	NA	NA	rs12331141	0.72	0.72	0.698	0.718051	0.7306	0.9901	0.6023	0.4297	0.8967	0.73	0.99	0.65	0.42	0.7564	0.99	0.52	T	0.003	B	0.008	B	0.482	N	1.000	P	0.375	N	-2.44	D	-1.000	T	0.000	T	0.058	-1.661	0.012	0.639	0.042	1.437	4.989	-1.661019	NA	1	0.778721	0.522696	NA	0.696	NA	7.0676124
945	2	113404708	113404708	G	A	exonic	SLC20A1	NA	synonymous SNV	SLC20A1:NM_005415:exon2:c.G303A:p.L101L	exonic	ENSG00000144136	NA	synonymous SNV	ENSG00000144136:ENST00000272542:exon2:c.G303A:p.L101L	Score=450;Name=lod=90	NA	2q13	NA	Name=Pol2,Pbx3,Pol2-4H8,Pol2(b)	Name=73	NA	rs4849091	0.36	0.36	0.338	0.360623	0.5497	0.2202	0.4481	0.1573	0.5235	0.55	0.2	0.49	0.14	0.492	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.422845	NA	NA	0.558953	0.20926	NA	0.449	NA	7.0660136
945	17	80159665	80159665	G	A	exonic	CCDC57	NA	synonymous SNV	CCDC57:NM_198082:exon2:c.C156T:p.C52C	exonic	ENSG00000176155	NA	synonymous SNV	ENSG00000176155:ENST00000389641:exon2:c.C156T:p.C52C,ENSG00000176155:ENST00000392347:exon2:c.C156T:p.C52C,ENSG00000176155:ENST00000392343:exon3:c.C156T:p.C52C	NA	NA	17q25.3	NA	Name=ZNF263	Name=6	NA	rs11653797	0.13	0.13	0.13	0.111022	0.1998	0.0565	0.1268	0.0552	0.1401	0.21	0.07	0.15	0.05	0.1785	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.296867	NA	NA	0.222444	0.094993	NA	0.145	NA	7.0659226
945	7	88423881	88423881	T	C	exonic	C7orf62	NA	nonsynonymous SNV	C7orf62:NM_152706:exon2:c.A376G:p.I126V	exonic	ENSG00000164645	NA	nonsynonymous SNV	ENSG00000164645:ENST00000297203:exon2:c.A376G:p.I126V	NA	NA	7q21.13	NA	NA	NA	NA	rs2293583	0.1	0.1	0.092	0.121605	0.0875	0.124	0.062	0.1051	0.2188	0.08	0.11	0.09	0.1	0.0998	0.11	0.34	T	0.021	B	0.013	B	0.182	N	1.000	P	1.52	L	2.44	T	-1.027	T	0.001	T	0.052	-0.755	0.804	1.07	0.164	-0.033	5.376	-0.754563	NA	0.24	0.080349	0.110758	NA	0.123	NA	7.0656844
946	16	8953081	8953081	C	G	exonic	CARHSP1	NA	synonymous SNV	CARHSP1:NM_001042476:exon2:c.G105C:p.R35R,CARHSP1:NM_014316:exon2:c.G105C:p.R35R	exonic	ENSG00000153048	NA	nonsynonymous SNV	ENSG00000153048:ENST00000568968:exon2:c.G131C:p.G44A	Score=457;Name=lod=96	NA	16p13.2	Score=849;Name=V$ARNT_01	Name=Pol2	NA	NA	rs8097	0.59	0.59	0.565	0.569688	0.666	0.6597	0.5303	0.3449	0.7096	0.68	0.68	0.56	0.37	0.6285	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.7539	1.7539	NA	0.640581	0.38684	NA	0.565	NA	7.064919
946	1	178489978	178489978	T	G	exonic	TEX35	NA	nonsynonymous SNV	TEX35:NM_001170722:exon7:c.T536G:p.L179R,TEX35:NM_001170723:exon7:c.T512G:p.L171R,TEX35:NM_001170724:exon7:c.T512G:p.L171R,TEX35:NM_032126:exon7:c.T512G:p.L171R	exonic	ENSG00000240021	NA	nonsynonymous SNV	ENSG00000240021:ENST00000258298:exon7:c.T284G:p.L95R,ENSG00000240021:ENST00000319416:exon7:c.T512G:p.L171R,ENSG00000240021:ENST00000367639:exon7:c.T536G:p.L179R,ENSG00000240021:ENST00000367641:exon7:c.T512G:p.L171R,ENSG00000240021:ENST00000367643:exon7:c.T512G:p.L171R	NA	NA	1q25.2	NA	NA	NA	NA	rs3813636	0.4	0.4	0.368	0.36901	0.4543	0.4077	0.4827	0.2247	0.3558	0.44	0.42	0.46	0.28	0.4016	0.48	0.18	T	0.95	P	0.698	P	0.732	N	1.000	P	1.525	L	1.74	T	-0.932	T	0.000	T	0.297	2.283	13.59	1.82	0.743	0.068	5.125	2.283107	2.283107	0.03	0.412558	0.282796	NA	0.5	NA	7.0648754
946	7	138713476	138713476	C	T	exonic	ZC3HAV1L	NA	nonsynonymous SNV	ZC3HAV1L:NM_080660:exon3:c.G732A:p.M244I	exonic	ENSG00000146858	NA	nonsynonymous SNV	ENSG00000146858:ENST00000275766:exon3:c.G732A:p.M244I	NA	NA	7q34	NA	NA	NA	NA	rs17856272	0.05	0.05	0.045	0.0491214	0.0964	NA	0.0576	0.0408	0.0562	0.1	NA	0.06	0.04	0.0762	0.1	0.19	T	0.02	B	0.025	B	0.543	N	1.000	N	0.695	N	1.55	T	-1.039	T	0.002	T	0.153	1.644	11.45	1.42	0.762	-0.187	5.448	1.643554	1.643554	0.23	0.096628	0.057422	NA	0.036	NA	7.0641054
946	7	44555406	44555406	G	A	exonic	NPC1L1	NA	synonymous SNV	NPC1L1:NM_001101648:exon18:c.C3792T:p.Y1264Y,NPC1L1:NM_013389:exon19:c.C3873T:p.Y1291Y	exonic	ENSG00000015520	NA	synonymous SNV	ENSG00000015520:ENST00000546276:exon17:c.C3654T:p.Y1218Y,ENSG00000015520:ENST00000381160:exon18:c.C3792T:p.Y1264Y,ENSG00000015520:ENST00000289547:exon19:c.C3873T:p.Y1291Y	Score=462;Name=lod=101	NA	7p13	NA	NA	Name=15	NA	rs10264715	0.1	0.1	0.088	0.0806709	0.2087	0.005	0.1009	0.0265	0.0859	0.2	0.01	0.12	0.02	0.1686	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.391682	NA	NA	0.22686	0.055606	NA	0.072	NA	7.0625066
946	21	47836547	47836547	T	C	exonic	PCNT	NA	nonsynonymous SNV	PCNT:NM_006031:exon30:c.T6715C:p.W2239R	exonic	ENSG00000160299	NA	nonsynonymous SNV	ENSG00000160299:ENST00000359568:exon30:c.T6715C:p.W2239R	NA	NA	21q22.3	NA	NA	NA	NA	rs35346764	0.16	0.16	0.148	0.18131	0.0924	0.004	0.0937	0.4977	0.09	0.1	0.0035	0.1	0.48	0.1054	0.48	0.7	T	0.0	B	0.0	B	0.730	N	1.000	P	-0.69	N	4.92	T	-1.014	T	0.000	T	0.013	-0.987	0.28	1.32	-0.164	-0.065	4.83	-0.986762	NA	0.77	0.073128	0.412905	NA	0.188	NA	7.0624054
946	19	3186085	3186085	G	T	exonic	NCLN	NA	synonymous SNV	NCLN:NM_020170:exon1:c.G57T:p.P19P	exonic	ENSG00000125912	NA	synonymous SNV	ENSG00000125912:ENST00000246117:exon1:c.G57T:p.P19P,ENSG00000125912:ENST00000588428:exon1:c.G57T:p.P19P	Score=704;Name=lod=965	NA	19p13.3	NA	Name=HEY1,c-Myc,CCNT2,Pol2-4H8,Sin3Ak-20,E2F6,Pol2,TAF1	Name=17	NA	rs11551095	0.55	0.55	0.541	0.553315	0.5318	0.5238	0.5288	0.6006	0.5593	0.54	0.52	0.53	0.64	0.5434	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.411455	1.411455	NA	0.52907	0.60236	ID=COSM439199;OCCURENCE=1(breast)	0.188	NA	7.0623966
946	10	116335246	116335246	G	A	exonic	ABLIM1	NA	synonymous SNV	ABLIM1:NM_001003407:exon3:c.C312T:p.F104F,ABLIM1:NM_001003408:exon3:c.C312T:p.F104F,ABLIM1:NM_002313:exon3:c.C492T:p.F164F	exonic	ENSG00000099204	NA	synonymous SNV	ENSG00000099204:ENST00000277895:exon3:c.C492T:p.F164F,ENSG00000099204:ENST00000369252:exon3:c.C312T:p.F104F,ENSG00000099204:ENST00000369256:exon3:c.C312T:p.F104F,ENSG00000099204:ENST00000392955:exon3:c.C312T:p.F104F,ENSG00000099204:ENST00000533213:exon3:c.C312T:p.F104F	Score=672;Name=lod=719	NA	10q25.3	Score=900;Name=V$P300_01	NA	NA	NA	rs985273	0.28	0.28	0.287	0.304513	0.2078	0.2321	0.3602	0.475	0.2086	0.19	0.25	0.34	0.44	0.2178	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.18683	NA	NA	0.178721	0.439174	ID=COSM147052;OCCURENCE=1(stomach)	0.312	NA	7.0623456
946	19	44098963	44098963	C	G	exonic	IRGQ	NA	synonymous SNV	IRGQ:NM_001007561:exon2:c.G528C:p.R176R	exonic	ENSG00000167378	NA	synonymous SNV	ENSG00000167378:ENST00000602269:exon1:c.G528C:p.R176R,ENSG00000167378:ENST00000422989:exon2:c.G528C:p.R176R	Score=389;Name=lod=51	NA	19q13.31	NA	Name=CTCF,Rad21,ELF1_(SC-631),BCLAF1_(M33-P5B11),YY1_(C-20),Pol2,SMC3_(ab9263),E2F6_(H-50),TAF1,Znf143_(16618-1-AP),CTCFL_(SC-98982),CTCF_(C-20),ZEB1_(SC-25388),RFX5_(N-494),CTCF_(SC-5916),Egr-1	Name=137	NA	rs304725	0.5	0.5	0.476	0.493211	0.5427	0.4911	0.5274	0.4017	0.544	0.52	0.51	0.55	0.41	0.5266	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.514502	1.514502	NA	0.535748	0.440909	NA	0.442	NA	7.0616186
946	21	47836122	47836122	T	C	exonic	PCNT	NA	nonsynonymous SNV	PCNT:NM_006031:exon30:c.T6290C:p.L2097P	exonic	ENSG00000160299	NA	nonsynonymous SNV	ENSG00000160299:ENST00000359568:exon30:c.T6290C:p.L2097P	NA	NA	21q22.3	NA	NA	NA	NA	rs2839245	0.16	0.16	0.165	0.178115	0.0924	0.004	0.0937	0.4856	0.09	0.1	0.0035	0.1	0.47	0.1036	0.47	0.17	T	0.0	B	0.0	B	0.098	N	1.000	P	-1.1	N	4.81	T	-0.982	T	0.000	T	0.04	0.357	5.937	-1.49	-0.476	-0.830	0.442	0.35683	NA	0.05	0.075814	0.434181	NA	0.196	NA	7.0615194
946	21	47841941	47841941	A	G	exonic	PCNT	NA	nonsynonymous SNV	PCNT:NM_006031:exon32:c.A7082G:p.Q2361R	exonic	ENSG00000160299	NA	nonsynonymous SNV	ENSG00000160299:ENST00000359568:exon32:c.A7082G:p.Q2361R	NA	NA	21q22.3	NA	NA	NA	NA	rs7277175	0.16	0.16	0.159	0.178514	0.0924	0.004	0.0937	0.4871	0.09	0.1	0.0035	0.1	0.47	0.1036	0.47	0.53	T	0.0	B	0.003	B	.	.	1.000	P	0	N	4.9	T	-1.083	T	0.000	T	0.021	-1.133	0.115	1.33	-0.074	-0.075	7.842	-1.132788	NA	0.34	0.075814	0.434408	NA	0.188	NA	7.0615194
946	2	128393800	128393800	T	C	exonic	MYO7B	NA	synonymous SNV	MYO7B:NM_001080527:exon44:c.T5946C:p.Y1982Y	exonic	ENSG00000169994	NA	synonymous SNV	ENSG00000169994:ENST00000409090:exon20:c.T2505C:p.Y835Y,ENSG00000169994:ENST00000409816:exon43:c.T5946C:p.Y1982Y,ENSG00000169994:ENST00000389524:exon44:c.T5949C:p.Y1983Y,ENSG00000169994:ENST00000428314:exon44:c.T5946C:p.Y1982Y	Score=440;Name=lod=82	NA	2q14.3	NA	NA	Name=3	NA	rs2255161	0.17	0.17	0.173	0.21905	0.1968	0.1458	0.1369	0.1853	0.4213	0.2	0.16	0.15	0.15	0.2146	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.518756	NA	NA	0.194032	0.188627	NA	0.167	NA	7.0612346
946	21	47836395	47836395	T	G	exonic	PCNT	NA	nonsynonymous SNV	PCNT:NM_006031:exon30:c.T6563G:p.M2188R	exonic	ENSG00000160299	NA	nonsynonymous SNV	ENSG00000160299:ENST00000359568:exon30:c.T6563G:p.M2188R	NA	NA	21q22.3	NA	NA	NA	NA	rs1044998	0.16	0.16	0.162	0.178315	0.0934	0.004	0.0937	0.4856	0.09	0.1	0.0035	0.1	0.47	0.1037	0.47	0.62	T	0.0	B	0.0	B	0.257	N	1.000	P	-1.1	N	4.89	T	-1.060	T	0.000	T	0.082	-1.14	0.11	-0.739	-0.403	0.113	1.699	-1.140387	NA	0.2	0.075814	0.433727	NA	0.196	NA	7.0604194
946	13	99907341	99907341	G	A	exonic	GPR18	NA	synonymous SNV	GPR18:NM_001098200:exon2:c.C786T:p.N262N,GPR18:NM_005292:exon3:c.C786T:p.N262N	exonic	ENSG00000125245	NA	synonymous SNV	ENSG00000125245:ENST00000397470:exon2:c.C786T:p.N262N,ENSG00000125245:ENST00000340807:exon3:c.C786T:p.N262N,ENSG00000125245:ENST00000397473:exon3:c.C786T:p.N262N	NA	NA	13q32.3	Score=846;Name=V$GR_Q6	NA	Name=3	NA	rs3742130	0.12	0.12	0.12	0.108427	0.2217	0.0595	0.1499	0.0401	0.1053	0.21	0.05	0.18	0.04	0.1647	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.807317	NA	NA	0.219884	0.082161	NA	0.087	NA	7.0603826
946	19	51960940	51960940	A	G	exonic	SIGLEC8	NA	nonsynonymous SNV	SIGLEC8:NM_014442:exon2:c.T508C:p.S170P	exonic	ENSG00000105366	NA	nonsynonymous SNV	ENSG00000105366:ENST00000321424:exon2:c.T508C:p.S170P	NA	NA	19q13.41	NA	NA	NA	NA	rs10409962	0.21	0.21	0.196	0.229233	0.0795	0.1022	0.1527	0.5855	0.0869	0.09	0.09	0.16	0.56	0.1231	0.56	1	T	0.0	B	0.0	B	0.348	N	1.000	P	-1.69	N	1.71	T	-0.948	T	0.000	T	0.041	-1.781	0.01	0.336	0.008	-0.512	2.171	-1.781355	NA	1	0.071395	0.495461	ID=COSM148700;OCCURENCE=1(stomach)	0.261	NA	7.0593384
946	16	10775855	10775855	G	A	exonic	TEKT5	NA	synonymous SNV	TEKT5:NM_144674:exon4:c.C858T:p.D286D	exonic	ENSG00000153060	NA	synonymous SNV	ENSG00000153060:ENST00000576638:exon3:c.C177T:p.D59D,ENSG00000153060:ENST00000283025:exon4:c.C858T:p.D286D	Score=399;Name=lod=56	NA	16p13.13	Score=897;Name=V$CREB_01	NA	NA	NA	rs12918646	0.3	0.3	0.25	0.294728	0.159	0.5446	0.4006	0.143	0.3067	0.2	0.52	0.35	0.14	0.2586	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.431064	NA	NA	0.19	0.16386	NA	0.304	NA	7.0590666
946	19	42265889	42265889	G	T	exonic	CEACAM6	NA	nonsynonymous SNV	CEACAM6:NM_002483:exon4:c.G716T:p.G239V	exonic	ENSG00000086548	NA	nonsynonymous SNV	ENSG00000086548:ENST00000199764:exon4:c.G716T:p.G239V	NA	NA	19q13.2	NA	NA	NA	NA	rs11548735	0.55	0.55	0.559	0.549321	0.4056	0.5625	0.536	0.7526	0.4182	0.42	0.58	0.5	0.74	0.4574	0.74	0.25	T	0.0	B	0.0	B	.	.	1.000	P	-0.41	N	2.95	T	-1.057	T	0.000	T	0.02	-0.677	1.048	-1.6	-1.295	-0.235	4.184	-0.676735	NA	0.49	0.41186	0.68384	NA	0.449	NA	7.0584734
946	20	37396120	37396120	A	G	exonic	ACTR5	NA	nonsynonymous SNV	ACTR5:NM_024855:exon8:c.A1447G:p.I483V	exonic	ENSG00000101442	NA	nonsynonymous SNV	ENSG00000101442:ENST00000243903:exon8:c.A1447G:p.I483V	NA	NA	20q11.23	NA	NA	NA	NA	rs2245231	0.42	0.42	0.431	0.433307	0.4245	0.4107	0.4337	0.4811	0.4008	0.42	0.41	0.38	0.48	0.4185	0.48	0.67	T	0.0	B	0.001	B	0.793	N	1.000	P	0.935	L	-3.45	D	-1.065	T	0.000	T	0.01	-1.793	0.01	-1.73	-0.376	0.095	9.610	-1.792507	NA	1	0.43186	0.460508	NA	0.384	NA	7.0584734
946	7	16655387	16655387	C	T	exonic	ANKMY2	NA	synonymous SNV	ANKMY2:NM_020319:exon5:c.G513A:p.T171T	exonic	ENSG00000106524	NA	synonymous SNV	ENSG00000106524:ENST00000306999:exon5:c.G513A:p.T171T,ENSG00000106524:ENST00000447802:exon5:c.G513A:p.T171T	Score=561;Name=lod=254	NA	7p21.1	Score=750;Name=V$PAX4_04	NA	NA	NA	rs11540037	0.16	0.16	0.123	0.176318	0.1948	0.2173	0.1657	0.0681	0.2689	0.19	0.2	0.18	0.05	0.2048	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.27958	NA	NA	0.208721	0.095325	NA	0.138	NA	7.0583456
947	7	106826381	106826381	C	T	exonic	HBP1	NA	synonymous SNV	HBP1:NM_001244262:exon4:c.C564T:p.H188H,HBP1:NM_012257:exon4:c.C534T:p.H178H	exonic	ENSG00000105856	NA	synonymous SNV	ENSG00000105856:ENST00000498408:exon3:c.C510T:p.H170H,ENSG00000105856:ENST00000222574:exon4:c.C534T:p.H178H,ENSG00000105856:ENST00000468410:exon4:c.C534T:p.H178H,ENSG00000105856:ENST00000485846:exon5:c.C534T:p.H178H	Score=541;Name=lod=211	NA	7q22.3	NA	NA	Name=14	NA	rs7794598	0.17	0.17	0.159	0.158147	0.2018	0.124	0.1282	0.1483	0.183	0.21	0.11	0.15	0.17	0.1949	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.06634	NA	NA	0.215116	0.144576	NA	0.101	NA	7.0548506
947	11	119005132	119005132	C	T	exonic	HINFP	NA	nonsynonymous SNV	HINFP:NM_198971:exon10:c.C1478T:p.A493V,HINFP:NM_015517:exon11:c.C1478T:p.A493V	exonic	ENSG00000172273	NA	nonsynonymous SNV	ENSG00000172273:ENST00000350777:exon10:c.C1478T:p.A493V	NA	NA	11q23.3	NA	Name=CTCF	NA	NA	rs100803	0.44	0.44	0.427	0.401757	0.4433	0.7183	0.2839	0.1687	0.4315	0.44	0.74	0.33	0.18	0.4159	0.74	0.2	T	0.0	B	0.001	B	0.548	N	1.000	P	0.205	N	2.91	T	-1.018	T	0.000	T	0.101	0.299	5.618	-0.697	-0.001	-0.098	2.468	0.298738	NA	0.51	0.420256	0.191591	NA	0.37	NA	7.0538774
947	1	205819104	205819104	G	A	exonic	PM20D1	NA	nonsynonymous SNV	PM20D1:NM_152491:exon1:c.C97T:p.H33Y	exonic	ENSG00000162877	NA	nonsynonymous SNV	ENSG00000162877:ENST00000367136:exon1:c.C97T:p.H33Y	NA	NA	1q32.1	NA	NA	NA	NA	rs11540014	0.17	0.17	0.15	0.160942	0.0974	0.4266	0.0605	0.053	0.1697	0.1	0.42	0.06	0.05	0.1076	0.42	1	T	0.0	B	0.0	B	0.539	N	1.000	P	0.69	N	3.29	T	-0.926	T	0.000	T	0.036	-0.689	1.008	-1.59	-0.492	0.390	0.572	-0.688948	NA	1	0.075349	0.060372	NA	0.087	NA	7.0529844
947	19	8321937	8321937	C	T	exonic	CERS4	NA	synonymous SNV	CERS4:NM_024552:exon9:c.C717T:p.H239H	exonic	ENSG00000090661	NA	synonymous SNV	ENSG00000090661:ENST00000559450:exon8:c.C717T:p.H239H,ENSG00000090661:ENST00000251363:exon9:c.C717T:p.H239H,ENSG00000090661:ENST00000558331:exon9:c.C564T:p.H188H,ENSG00000090661:ENST00000559336:exon9:c.C717T:p.H239H	Score=433;Name=lod=77	NA	19p13.2	NA	Name=CTCF	NA	NA	rs1127912	0.24	0.24	0.221	0.228035	0.2117	0.1964	0.2291	0.3434	0.1207	0.22	0.2	0.23	0.33	0.2125	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.214214	NA	NA	0.19093	0.312755	ID=COSM148474;OCCURENCE=1(stomach)	0.217	NA	7.0515366
947	7	106897237	106897237	A	C	exonic	COG5	NA	synonymous SNV	COG5:NM_001161520:exon16:c.T1782G:p.V594V,COG5:NM_006348:exon16:c.T1782G:p.V594V	exonic	ENSG00000164597	NA	synonymous SNV	ENSG00000164597:ENST00000297135:exon16:c.T1782G:p.V594V,ENSG00000164597:ENST00000393603:exon16:c.T1782G:p.V594V	Score=511;Name=lod=159	NA	7q22.3	NA	Name=MafK_(ab50322)	NA	NA	rs17349904	0.14	0.14	0.13	0.129792	0.2028	0.1587	0.121	0.0136	0.1881	0.21	0.15	0.14	0.02	0.1983	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.130655	NA	NA	0.214767	0.049932	NA	0.058	NA	7.0507996
947	10	129899778	129899778	G	C	exonic	MKI67	NA	nonsynonymous SNV	MKI67:NM_001145966:exon13:c.C8369G:p.T2790S,MKI67:NM_002417:exon14:c.C9449G:p.T3150S	exonic	ENSG00000148773	NA	nonsynonymous SNV	ENSG00000148773:ENST00000368653:exon13:c.C8369G:p.T2790S,ENSG00000148773:ENST00000368654:exon14:c.C9449G:p.T3150S	NA	NA	10q26.2	NA	NA	NA	NA	rs11106	0.43	0.43	0.441	0.423922	0.4264	0.3859	0.5432	0.4561	0.3323	0.43	0.42	0.52	0.39	0.4317	0.52	0.81	T	0.0	B	0.0	B	0.243	N	1.000	P	-0.695	N	5.27	T	-0.997	T	0.000	T	0.004	-1.458	0.019	-1.54	-0.713	-1.919	3.323	-1.458143	NA	1	0.425465	0.445075	NA	0.384	NA	7.0497684
947	7	48285485	48285485	C	T	exonic	ABCA13	NA	nonsynonymous SNV	ABCA13:NM_152701:exon13:c.C1517T:p.P506L	exonic	ENSG00000179869	NA	nonsynonymous SNV	ENSG00000179869:ENST00000435803:exon13:c.C1517T:p.P506L	NA	NA	7p12.3	NA	NA	NA	NA	rs1880738	0.4	0.4	0.346	0.40655	0.4115	0.6181	0.4366	0.1596	0.4959	0.41	0.59	0.43	0.13	0.4441	0.59	0.69	T	0.0	B	0.0	B	0.943	N	1.000	P	0	N	-1.48	T	-0.951	T	0.000	T	0.041	1.276	10.17	-2.68	-0.277	0.065	0.685	1.276424	1.276424	1	0.429735	0.179775	ID=COSM453164,COSM453163;OCCURENCE=1(breast)	0.5	NA	7.0479984
947	16	49670390	49670390	A	G	exonic	ZNF423	NA	synonymous SNV	ZNF423:NM_001271620:exon4:c.T2493C:p.C831C,ZNF423:NM_015069:exon4:c.T2673C:p.C891C	exonic	ENSG00000102935	NA	synonymous SNV	ENSG00000102935:ENST00000535559:exon2:c.T2322C:p.C774C,ENSG00000102935:ENST00000567169:exon2:c.T2322C:p.C774C,ENSG00000102935:ENST00000562871:exon3:c.T2493C:p.C831C,ENSG00000102935:ENST00000561648:exon4:c.T2673C:p.C891C,ENSG00000102935:ENST00000562520:exon4:c.T2493C:p.C831C,ENSG00000102935:ENST00000563137:exon4:c.T2493C:p.C831C,ENSG00000102935:ENST00000262383:exon5:c.T2673C:p.C891C	Score=650;Name=lod=586	NA	16q12.1	Score=830;Name=V$ATF_01	NA	NA	NA	rs3803667	0.22	0.22	0.196	0.204872	0.1948	0.2073	0.281	0.1982	0.1677	0.21	0.23	0.24	0.2	0.2165	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.891494	NA	NA	0.209767	0.210646	NA	0.058	NA	7.0455996
948	4	113539969	113539969	T	C	exonic	C4orf21	NA	nonsynonymous SNV	C4orf21:NM_018392:exon6:c.A1229G:p.N410S	exonic	ENSG00000138658	NA	nonsynonymous SNV	ENSG00000138658:ENST00000309071:exon6:c.A1229G:p.N410S,ENSG00000138658:ENST00000473015:exon6:c.A1229G:p.N410S,ENSG00000138658:ENST00000505019:exon6:c.A1229G:p.N410S,ENSG00000138658:ENST00000445203:exon7:c.A1136G:p.N379S	NA	NA	4q25	NA	NA	NA	NA	rs7696816	0.41	0.41	0.416	0.417732	0.4284	0.4117	0.5086	0.3003	0.5072	0.43	0.43	0.5	0.31	0.436	0.5	1	T	0.0	B	0.0	B	0.840	N	1.000	P	-0.345	N	2.03	T	-0.997	T	0.000	T	0.003	-1.933	0.008	-0.147	0.149	-1.654	1.474	-1.932518	NA	1	0.42407	0.325238	NA	0.529	NA	7.0448634
948	19	51920613	51920613	C	T	exonic	SIGLEC10	NA	synonymous SNV	SIGLEC10:NM_001171156:exon2:c.G144A:p.Q48Q,SIGLEC10:NM_001171157:exon2:c.G144A:p.Q48Q,SIGLEC10:NM_001171158:exon2:c.G144A:p.Q48Q,SIGLEC10:NM_001171159:exon2:c.G144A:p.Q48Q,SIGLEC10:NM_001171161:exon2:c.G144A:p.Q48Q,SIGLEC10:NM_033130:exon2:c.G144A:p.Q48Q	exonic;splicing	ENSG00000142512;ENSG00000142512	ENST00000530476:exon3:c.46-1G>A	synonymous SNV	ENSG00000142512:ENST00000339313:exon2:c.G144A:p.Q48Q,ENSG00000142512:ENST00000353836:exon2:c.G144A:p.Q48Q,ENSG00000142512:ENST00000356298:exon2:c.G144A:p.Q48Q,ENSG00000142512:ENST00000432469:exon2:c.G144A:p.Q48Q,ENSG00000142512:ENST00000436984:exon2:c.G144A:p.Q48Q,ENSG00000142512:ENST00000439889:exon2:c.G144A:p.Q48Q,ENSG00000142512:ENST00000441969:exon2:c.G144A:p.Q48Q,ENSG00000142512:ENST00000442846:exon2:c.G144A:p.Q48Q,ENSG00000142512:ENST00000525998:exon2:c.G144A:p.Q48Q	NA	NA	19q13.41	NA	NA	NA	NA	rs1010425	0.86	0.86	0.844	0.834265	0.8728	0.8641	0.8876	0.7421	0.8507	0.88	0.88	0.88	0.78	0.8702	0.88	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	.	.	.	.	.	0.134	4.72	-9.07	-5.273	-5.720	1.052	0.13396	NA	NA	0.87907	0.770086	NA	0.913	NA	7.0445966
948	8	23190941	23190941	T	C	exonic	LOXL2	NA	synonymous SNV	LOXL2:NM_002318:exon5:c.A939G:p.S313S	exonic	ENSG00000134013	NA	synonymous SNV	ENSG00000134013:ENST00000389131:exon5:c.A939G:p.S313S	NA	NA	8p21.3	NA	NA	NA	NA	rs1010156	0.46	0.46	0.442	0.412141	0.5537	0.4742	0.3948	0.3169	0.3436	0.56	0.49	0.41	0.31	0.4999	0.57	.	.	.	.	.	.	.	.	0.001	P	.	.	.	.	-1.005	T	0.000	T	.	0.386	6.097	-11.9	-2.452	-5.057	6.486	0.386253	NA	NA	0.568605	0.342261	NA	0.384	NA	7.0444616
948	18	9887546	9887546	G	A	exonic	TXNDC2	NA	nonsynonymous SNV	TXNDC2:NM_001098529:exon2:c.G1070A:p.G357D,TXNDC2:NM_032243:exon2:c.G869A:p.G290D	exonic	ENSG00000168454	NA	nonsynonymous SNV	ENSG00000168454:ENST00000306084:exon2:c.G1070A:p.G357D,ENSG00000168454:ENST00000357775:exon2:c.G869A:p.G290D	NA	NA	18p11.22	NA	NA	NA	NA	rs2240906	0.51	0.51	0.474	0.481629	0.4185	0.8155	0.4481	0.3548	0.3978	0.43	0.8	0.43	0.34	0.448	0.8	.	.	0.023	B	0.051	B	.	.	1.000	P	0.75	N	1.43	T	-1.039	T	0.000	T	0.052	-0.176	3.14	0.852	-0.049	-1.783	6.363	-0.176442	NA	NA	0.422674	0.376759	ID=COSM1389977,COSM1389978;OCCURENCE=1(large_intestine)	0.355	NA	7.0441594
948	1	247835950	247835950	T	C	exonic	OR13G1	NA	nonsynonymous SNV	OR13G1:NM_001005487:exon1:c.A394G:p.I132V	exonic	ENSG00000197437	NA	nonsynonymous SNV	ENSG00000197437:ENST00000359688:exon1:c.A394G:p.I132V	NA	NA	1q44	NA	NA	NA	NA	rs1151640	0.44	0.44	0.408	0.40595	0.4195	0.6032	0.5937	0.1286	0.4305	0.42	0.65	0.56	0.13	0.4453	0.65	0.49	T	0.002	B	0.006	B	0.450	N	1.000	P	1.245	L	5.83	T	-1.077	T	0.000	T	0.066	-0.112	3.452	-3.4	-0.755	-0.022	5.921	-0.11175	NA	0.48	0.424884	0.167726	ID=COSM1341001;OCCURENCE=1(large_intestine)	0.304	NA	7.0436494
948	20	19261623	19261623	G	A	exonic	SLC24A3	NA	nonsynonymous SNV	SLC24A3:NM_020689:exon2:c.G163A:p.V55I	exonic	ENSG00000185052	NA	nonsynonymous SNV	ENSG00000185052:ENST00000328041:exon2:c.G163A:p.V55I	Score=500;Name=lod=143	NA	20p11.23	NA	NA	NA	NA	rs1569767	0.43	0.43	0.42	0.432109	0.4175	0.5188	0.5375	0.3298	0.4213	0.41	0.53	0.54	0.28	0.4396	0.54	.	.	0.0	B	0.0	B	0.760	N	1.000	P	0.205	N	0.15	T	-0.916	T	0.000	T	0.014	1.3	10.25	1.86	-0.085	-0.057	2.317	1.2997	1.2997	1	0.43314	0.326827	NA	0.435	NA	7.0430934
948	5	147498019	147498019	G	A	exonic	SPINK5	NA	nonsynonymous SNV	SPINK5:NM_001127698:exon23:c.G2132A:p.R711Q,SPINK5:NM_001127699:exon23:c.G2132A:p.R711Q,SPINK5:NM_006846:exon23:c.G2132A:p.R711Q	exonic	ENSG00000133710	NA	nonsynonymous SNV	ENSG00000133710:ENST00000256084:exon23:c.G2132A:p.R711Q,ENSG00000133710:ENST00000359874:exon23:c.G2132A:p.R711Q,ENSG00000133710:ENST00000398454:exon23:c.G2132A:p.R711Q,ENSG00000133710:ENST00000508733:exon23:c.G2075A:p.R692Q	NA	NA	5q32	NA	NA	NA	NA	rs3777134	0.49	0.49	0.468	0.488419	0.5924	0.4821	0.634	0.3139	0.5204	0.56	0.46	0.59	0.36	0.583	0.62	0.5	T	0.556	P	0.103	B	0.490	N	1.000	P	0.94	L	3.26	T	-1.085	T	0.000	T	0.155	0.778	8.108	2.99	0.907	0.440	8.587	0.778056	NA	0.11	0.616488	0.380952	ID=COSM149974;OCCURENCE=1(stomach)	0.471	NA	7.0414454
948	17	78079643	78079643	C	T	exonic	GAA	NA	synonymous SNV	GAA:NM_000152:exon3:c.C642T:p.S214S,GAA:NM_001079804:exon3:c.C642T:p.S214S,GAA:NM_001079803:exon4:c.C642T:p.S214S	exonic	ENSG00000171298	NA	synonymous SNV	ENSG00000171298:ENST00000302262:exon3:c.C642T:p.S214S,ENSG00000171298:ENST00000570803:exon3:c.C642T:p.S214S,ENSG00000171298:ENST00000390015:exon4:c.C642T:p.S214S	NA	NA	17q25.3	NA	NA	Name=43	NA	rs1800301	0.11	0.11	0.121	0.10603	0.2276	0.002	0.1138	0.0582	0.1472	0.22	NA	0.11	0.08	0.1802	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.086525	NA	NA	0.22	0.078983	NA	0.138	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000078184.2;CLNDSDB=.;CLNDSDBID=.	7.0388666
948	18	67687860	67687860	T	C	exonic	RTTN	NA	synonymous SNV	RTTN:NM_173630:exon45:c.A6144G:p.V2048V	exonic	ENSG00000176225	NA	synonymous SNV	ENSG00000176225:ENST00000255674:exon45:c.A6144G:p.V2048V	Score=529;Name=lod=189	NA	18q22.2	NA	NA	NA	NA	rs2304378	0.17	0.17	0.157	0.152356	0.2286	0.1806	0.1311	0.0605	0.184	0.22	0.18	0.17	0.07	0.1919	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.499592	1.499592	NA	0.208921	0.085277	NA	0.188	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118220.2;CLNDSDB=.;CLNDSDBID=.	7.0372456
948	2	95947085	95947085	A	G	exonic	PROM2	NA	nonsynonymous SNV	PROM2:NM_001165977:exon12:c.A1523G:p.Q508R,PROM2:NM_001165978:exon12:c.A1523G:p.Q508R,PROM2:NM_144707:exon12:c.A1523G:p.Q508R	exonic	ENSG00000155066	NA	nonsynonymous SNV	ENSG00000155066:ENST00000317620:exon12:c.A1523G:p.Q508R,ENSG00000155066:ENST00000317668:exon12:c.A1523G:p.Q508R,ENSG00000155066:ENST00000403131:exon12:c.A1523G:p.Q508R,ENSG00000155066:ENST00000542147:exon12:c.A1523G:p.Q508R	NA	NA	2q11.1	NA	NA	NA	NA	rs12992066	0.79	0.79	0.787	0.79972	0.7664	0.6885	0.866	0.9085	0.7546	0.75	0.69	0.9	0.9	0.7749	0.9	0.75	T	0.0	B	0.0	B	0.909	N	1.000	P	-0.41	N	0.9	T	-0.984	T	0.000	T	0.046	-2.209	0.005	-3.94	-2.531	0.082	14.375	-2.208608	NA	0.89	0.755349	0.879483	NA	0.768	NA	7.0366844
948	1	177902753	177902753	G	C	exonic	SEC16B	NA	nonsynonymous SNV	SEC16B:NM_033127:exon21:c.C2590G:p.P864A	exonic	ENSG00000120341	NA	nonsynonymous SNV	ENSG00000120341:ENST00000308284:exon21:c.C2590G:p.P864A	NA	NA	1q25.2	NA	NA	NA	NA	rs591120	0.41	0.41	0.417	0.408946	0.4463	0.2808	0.4409	0.4644	0.4049	0.45	0.35	0.4	0.44	0.4236	0.46	0.91	T	0.0	B	0.0	B	0.264	N	1.000	P	-1.78	N	2.72	T	-0.941	T	0.000	T	0.014	0.634	7.408	2.73	0.052	-0.320	4.338	0.634161	NA	0.27	0.427864	0.462279	NA	0.42	NA	7.0355694
949	11	34668143	34668143	C	T	exonic	EHF	NA	synonymous SNV	EHF:NM_001206615:exon3:c.C255T:p.L85L,EHF:NM_001206616:exon3:c.C321T:p.L107L,EHF:NM_012153:exon3:c.C255T:p.L85L	exonic	ENSG00000135373	NA	synonymous SNV	ENSG00000135373:ENST00000527935:exon2:c.C255T:p.L85L,ENSG00000135373:ENST00000257831:exon3:c.C255T:p.L85L,ENSG00000135373:ENST00000450654:exon3:c.C255T:p.L85L,ENSG00000135373:ENST00000525253:exon3:c.C255T:p.L85L,ENSG00000135373:ENST00000529527:exon3:c.C255T:p.L85L,ENSG00000135373:ENST00000530286:exon3:c.C255T:p.L85L,ENSG00000135373:ENST00000531728:exon3:c.C255T:p.L85L,ENSG00000135373:ENST00000531794:exon3:c.C321T:p.L107L,ENSG00000135373:ENST00000532302:exon3:c.C255T:p.L85L,ENSG00000135373:ENST00000533754:exon3:c.C255T:p.L85L	Score=704;Name=lod=966	NA	11p13	Score=929;Name=V$E47_02	NA	NA	NA	rs2281910	0.26	0.26	0.216	0.23123	0.1948	0.38	0.3213	0.1558	0.1534	0.2	0.38	0.32	0.16	0.2326	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.275571	1.275571	NA	0.204979	0.156222	NA	0.138	NA	7.0342876
949	11	5364276	5364276	G	A	exonic	OR51B5	NA	nonsynonymous SNV	OR51B5:NM_001005567:exon5:c.C479T:p.P160L	exonic	ENSG00000242180	NA	nonsynonymous SNV	ENSG00000242180:ENST00000300773:exon1:c.C479T:p.P160L	NA	NA	11p15.4	NA	NA	NA	NA	rs4910551	0.33	0.33	0.302	0.32488	0.4404	0.1786	0.402	0.2595	0.3906	0.44	0.16	0.42	0.27	0.413	0.45	1	T	0.589	P	0.507	P	0.031	N	1.000	P	-1.87	N	5.75	T	-1.034	T	0.000	T	0.103	-0.45	1.914	1.66	0.609	-0.781	1.224	-0.450089	NA	0.6	0.446591	0.278055	NA	0.362	NA	7.0333424
949	1	17087465	17087465	G	A	exonic	MST1L	NA	nonsynonymous SNV	MST1L:NM_001271733:exon2:c.C200T:p.P67L	ncRNA_exonic	ENSG00000186715	NA	NA	NA	Score=563;Name=lod=259	NA	1p36.13	NA	NA	NA	NA	rs11260924	NA	NA	0.581	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.467	0.022	0.34	T	0.007	B	0.009	B	0.155	N	.	.	.	.	.	.	-1.043	T	0.068	T	0.193	-0.425	2.02	.	-0.000	-0.121	5.303	-0.424959	NA	0.37	NA	NA	NA	0.043	NA	7.033
949	22	26936897	26936897	G	A	exonic	TPST2	NA	synonymous SNV	TPST2:NM_001008566:exon3:c.C700T:p.L234L,TPST2:NM_003595:exon3:c.C700T:p.L234L	exonic	ENSG00000128294	NA	synonymous SNV	ENSG00000128294:ENST00000338754:exon3:c.C700T:p.L234L,ENSG00000128294:ENST00000398110:exon3:c.C700T:p.L234L,ENSG00000128294:ENST00000403880:exon4:c.C700T:p.L234L	Score=587;Name=lod=325	NA	22q12.1	Score=873;Name=V$HMX1_01	NA	NA	NA	rs12169509	0.14	0.14	0.136	0.102835	0.2386	0.003	0.1081	0.1059	0.0583	0.24	0.0035	0.15	0.14	0.1684	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.902956	NA	NA	0.22686	0.108261	NA	0.087	NA	7.0328066
949	1	182993025	182993025	C	T	exonic	LAMC1	NA	synonymous SNV	LAMC1:NM_002293:exon1:c.C174T:p.A58A	exonic	ENSG00000135862	NA	synonymous SNV	ENSG00000135862:ENST00000258341:exon1:c.C174T:p.A58A	Score=785;Name=lod=2066	NA	1q25.3	NA	Name=BAF155,NFKB,AP-2gamma,HA-E2F1,Pol2-4H8,ERalpha_a,E2F6,Pol2,AP-2alpha	Name=3	NA	rs10911194	0.52	0.52	0.456	0.519569	0.5338	0.628	0.611	0.3192	0.5992	0.55	0.58	0.57	0.37	0.558	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.867186	1.867186	NA	0.54407	0.356559	NA	0.406	NA	7.0307966
949	12	117669914	117669914	G	A	exonic	NOS1	NA	synonymous SNV	NOS1:NM_001204213:exon21:c.C2250T:p.D750D,NOS1:NM_001204214:exon21:c.C2250T:p.D750D,NOS1:NM_000620:exon22:c.C3258T:p.D1086D,NOS1:NM_001204218:exon23:c.C3360T:p.D1120D	exonic	ENSG00000089250	NA	synonymous SNV	ENSG00000089250:ENST00000317775:exon22:c.C3258T:p.D1086D,ENSG00000089250:ENST00000338101:exon22:c.C3360T:p.D1120D	Score=489;Name=lod=129	NA	12q24.22	NA	Name=CTCF	NA	NA	rs3741475	0.25	0.25	0.271	0.258387	0.2137	0.3304	0.2118	0.2821	0.2311	0.21	0.29	0.2	0.29	0.2211	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.149705	NA	NA	0.201222	0.242771	ID=COSM1359113;OCCURENCE=1(large_intestine)	0.275	NA	7.0306446
949	3	10443827	10443827	G	C	exonic	ATP2B2	NA	synonymous SNV	ATP2B2:NM_001001331:exon4:c.C603G:p.V201V,ATP2B2:NM_001683:exon4:c.C603G:p.V201V	exonic	ENSG00000157087	NA	synonymous SNV	ENSG00000157087:ENST00000452124:exon2:c.C264G:p.V88V,ENSG00000157087:ENST00000352432:exon3:c.C603G:p.V201V,ENSG00000157087:ENST00000343816:exon4:c.C603G:p.V201V,ENSG00000157087:ENST00000360273:exon4:c.C603G:p.V201V,ENSG00000157087:ENST00000383800:exon4:c.C603G:p.V201V,ENSG00000157087:ENST00000460129:exon4:c.C603G:p.V201V,ENSG00000157087:ENST00000397077:exon6:c.C603G:p.V201V	Score=491;Name=lod=132	NA	3p25.3	Score=939;Name=V$LMO2COM_01	NA	NA	NA	rs13084776	0.14	0.14	0.101	0.169329	0.2097	0.0099	0.3256	0.1233	0.2434	0.19	0.01	0.29	0.11	0.212	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.297539	1.297539	NA	0.214884	0.132093	NA	0.239	NA	7.0300826
949	17	42979026	42979026	T	C	splicing	CCDC103	NM_001258399:exon3:c.280+2T>C,NM_001258398:exon3:c.280+2T>C	NA	NA	intronic	ENSG00000167131,ENSG00000214447	NA	NA	NA	NA	NA	17q21.31	Score=799;Name=V$CDPCR3_01	Name=AP-2alpha,AP-2gamma,CTCF	Name=109	NA	rs74349463	0.1	0.1	0.102	0.0946486	0.166	0.005	0.1037	0.0635	0.1493	0.16	0.0035	0.13	0.08	0.1348	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.115746	NA	NA	0.169419	0.070132	NA	0.08	NA	7.029781
949	14	21623648	21623648	G	A	exonic	OR5AU1	NA	synonymous SNV	OR5AU1:NM_001004731:exon1:c.C537T:p.N179N	exonic	ENSG00000169327	NA	synonymous SNV	ENSG00000169327:ENST00000304418:exon1:c.C537T:p.N179N	Score=478;Name=lod=117	NA	14q11.2	NA	Name=TAL1_(SC-12984)	Name=2	NA	rs7161544	0.38	0.38	0.357	0.347843	0.5755	0.1389	0.3501	0.3162	0.3701	0.57	0.13	0.43	0.32	0.4791	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.594607	NA	NA	0.58314	0.360872	NA	0.471	NA	7.0289266
949	9	135470414	135470414	T	C	exonic	DDX31	NA	nonsynonymous SNV	DDX31:NM_022779:exon20:c.A2395G:p.I799V	exonic	ENSG00000125485	NA	nonsynonymous SNV	ENSG00000125485:ENST00000372153:exon18:c.A2176G:p.I726V,ENSG00000125485:ENST00000372159:exon20:c.A2395G:p.I799V,ENSG00000125485:ENST00000438527:exon20:c.A2008G:p.I670V	NA	NA	9q34.13	NA	NA	NA	NA	rs306547	0.8	0.8	0.795	0.826877	0.7744	0.7183	0.8444	0.9387	0.8292	0.78	0.7	0.82	0.93	0.7771	0.93	0.4	T	0.0	B	0.0	B	0.001	N	1.000	P	-0.69	N	4.44	T	-1.028	T	0.000	T	0.103	-1.071	0.172	-2.58	-1.297	-0.392	5.677	-1.070575	NA	1	0.753023	0.916931	NA	0.855	NA	7.0288104
949	3	108095365	108095365	G	A	exonic	HHLA2	NA	synonymous SNV	HHLA2:NM_007072:exon9:c.G1185A:p.E395E	exonic	ENSG00000114455	NA	synonymous SNV	ENSG00000114455:ENST00000467761:exon8:c.G1185A:p.E395E,ENSG00000114455:ENST00000357759:exon9:c.G1185A:p.E395E,ENSG00000114455:ENST00000489514:exon9:c.G1185A:p.E395E,ENSG00000114455:ENST00000491820:exon9:c.G1134A:p.E378E,ENSG00000114455:ENST00000467562:exon10:c.G993A:p.E331E	NA	NA	3q13.13	NA	NA	NA	NA	rs2124736	0.12	0.12	0.093	0.0896565	0.2326	0.001	0.1527	0.0136	0.092	0.24	NA	0.18	0.01	0.1738	0.24	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.982	T	0.000	T	.	-0.527	1.601	-2.48	-0.545	-0.141	1.081	-0.526518	NA	NA	0.231603	0.056503	NA	0.109	NA	7.0286636
949	12	6637941	6637941	C	T	exonic	NCAPD2	NA	synonymous SNV	NCAPD2:NM_014865:exon26:c.C3396T:p.S1132S	exonic	ENSG00000010292	NA	synonymous SNV	ENSG00000010292:ENST00000545962:exon25:c.C3261T:p.S1087S,ENSG00000010292:ENST00000315579:exon26:c.C3396T:p.S1132S	Score=580;Name=lod=303	NA	12p13.31	Score=941;Name=V$GATA2_01	NA	NA	NA	rs10849484	0.11	0.11	0.094	0.104633	0.2097	0.0089	0.1354	0.0182	0.1902	0.21	0.01	0.18	0.03	0.1923	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.379425	1.379425	NA	0.236047	0.053109	NA	0.087	NA	7.0286196
949	15	101109794	101109794	C	G	exonic	LINS	NA	nonsynonymous SNV	LINS:NM_001040616:exon7:c.G1923C:p.E641D	exonic	ENSG00000140471	NA	nonsynonymous SNV	ENSG00000140471:ENST00000314742:exon7:c.G1923C:p.E641D	NA	NA	15q26.3	NA	NA	Name=12	NA	rs12157	0.33	0.33	0.335	0.311502	0.4513	0.244	0.2493	0.239	0.3793	0.46	0.25	0.29	0.25	0.3848	0.47	0.83	T	0.0	B	0.001	B	0.884	N	1.000	P	-1.15	N	2.78	T	-0.923	T	0.000	T	0.009	-1.528	0.016	0.695	0.171	0.066	2.189	-1.528368	NA	0.91	0.469419	0.282569	NA	0.377	NA	7.0278144
949	7	100371100	100371100	C	A	exonic	ZAN	NA	unknown	UNKNOWN	exonic	ENSG00000146839	NA	nonsynonymous SNV	ENSG00000146839:ENST00000538115:exon29:c.C5618A:p.A1873E,ENSG00000146839:ENST00000542585:exon29:c.C5618A:p.A1873E,ENSG00000146839:ENST00000546292:exon29:c.C5618A:p.A1873E	NA	NA	7q22.1	NA	NA	NA	NA	rs2734880	0.47	0.47	0.487	0.483826	0.5815	0.1796	0.3833	0.6959	0.4816	0.58	0.15	0.41	0.72	0.5031	0.72	0.55	T	0.001	B	0.004	B	0.002	N	1.000	P	-0.5	N	3.62	T	-0.959	T	0.000	T	0.295	-1.915	0.008	-9.15	-2.048	-0.747	1.285	-1.914539	NA	NA	0.555488	0.692703	ID=COSM1446671,COSM1446672;OCCURENCE=1(large_intestine)	0.551	NA	7.0265787
949	2	160676350	160676350	T	C	exonic	LY75,LY75-CD302	NA	nonsynonymous SNV	LY75-CD302:NM_001198759:exon29:c.A4040G:p.K1347R,LY75-CD302:NM_001198760:exon29:c.A4040G:p.K1347R,LY75:NM_002349:exon29:c.A4040G:p.K1347R	exonic	ENSG00000054219,ENSG00000248672	NA	nonsynonymous SNV	ENSG00000054219:ENST00000263636:exon29:c.A4040G:p.K1347R,ENSG00000248672:ENST00000504764:exon29:c.A4040G:p.K1347R,ENSG00000248672:ENST00000505052:exon29:c.A4040G:p.K1347R,ENSG00000054219:ENST00000553424:exon29:c.A4040G:p.K1347R,ENSG00000054219:ENST00000554112:exon29:c.A4040G:p.K1347R	NA	NA	2q24.2	NA	NA	NA	NA	rs17827158	0.07	0.07	0.057	0.0728834	0.1044	0.0079	0.0807	0.0567	0.1237	0.1	0.01	0.12	0.08	0.0976	0.12	0.53	T	0.004	B	0.01	B	.	.	1.000	P	0.975	L	3.15	T	-0.942	T	0.000	T	0.111	0.906	8.685	1.98	0.403	0.646	1.410	0.905974	NA	0.04	0.104767	0.070132	NA	0.116	NA	7.0265664
949	3	4716811	4716811	A	C	exonic	ITPR1	NA	synonymous SNV	ITPR1:NM_001168272:exon22:c.A2613C:p.L871L,ITPR1:NM_002222:exon22:c.A2613C:p.L871L,ITPR1:NM_001099952:exon23:c.A2658C:p.L886L	exonic	ENSG00000150995	NA	synonymous SNV	ENSG00000150995:ENST00000443694:exon20:c.A2613C:p.L871L,ENSG00000150995:ENST00000302640:exon22:c.A2613C:p.L871L,ENSG00000150995:ENST00000456211:exon22:c.A2613C:p.L871L,ENSG00000150995:ENST00000354582:exon23:c.A2658C:p.L886L,ENSG00000150995:ENST00000357086:exon23:c.A2658C:p.L886L,ENSG00000150995:ENST00000423119:exon23:c.A2658C:p.L886L	NA	NA	3p26.1	Score=754;Name=V$EVI1_01	NA	NA	NA	rs2306877	0.3	0.3	0.288	0.332867	0.1958	0.2897	0.3184	0.3911	0.4499	0.21	0.3	0.33	0.41	0.2692	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.774164	NA	NA	0.175709	0.360384	NA	0.239	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117300.2;CLNDSDB=.;CLNDSDBID=.	7.0259576
949	11	129321066	129321066	C	T	exonic	BARX2	NA	synonymous SNV	BARX2:NM_003658:exon4:c.C609T:p.P203P	exonic	ENSG00000043039	NA	synonymous SNV	ENSG00000043039:ENST00000531946:exon2:c.C243T:p.P81P,ENSG00000043039:ENST00000526127:exon3:c.C174T:p.P58P,ENSG00000043039:ENST00000281437:exon4:c.C609T:p.P203P	Score=429;Name=lod=74	NA	11q24.3	Score=870;Name=V$FAC1_01	NA	NA	NA	rs10791011	0.25	0.25	0.255	0.299321	0.1968	0.4048	0.1902	0.2224	0.4775	0.2	0.41	0.19	0.19	0.2459	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.26478	1.26478	NA	0.198627	0.222853	NA	0.181	NA	7.0253396
950	22	44489868	44489868	T	C	exonic	PARVB	NA	nonsynonymous SNV	PARVB:NM_001243385:exon2:c.T62C:p.V21A,PARVB:NM_001243386:exon2:c.T17C:p.V6A,PARVB:NM_013327:exon2:c.T173C:p.V58A,PARVB:NM_001003828:exon3:c.T272C:p.V91A	exonic	ENSG00000188677	NA	nonsynonymous SNV	ENSG00000188677:ENST00000338758:exon2:c.T173C:p.V58A,ENSG00000188677:ENST00000402876:exon2:c.T173C:p.V58A,ENSG00000188677:ENST00000404989:exon2:c.T62C:p.V21A,ENSG00000188677:ENST00000406477:exon3:c.T272C:p.V91A,ENSG00000188677:ENST00000444029:exon3:c.T167C:p.V56A	NA	NA	22q13.31	NA	NA	NA	NA	rs1983609	0.87	0.87	0.87	0.872204	0.7386	0.9593	0.8818	0.9773	0.771	0.73	0.97	0.87	0.97	0.8097	0.97	0.7	T	0.003	B	0.005	B	0.526	N	1.000	P	0.025	N	1.5	T	-1.036	T	0.000	T	0.161	-1.194	0.075	-4.14	-1.601	0.009	8.981	-1.193909	NA	0.36	0.760465	0.948479	NA	0.797	NA	7.0245684
950	4	11401012	11401012	A	G	exonic	HS3ST1	NA	synonymous SNV	HS3ST1:NM_005114:exon2:c.T618C:p.F206F	exonic	ENSG00000002587	NA	synonymous SNV	ENSG00000002587:ENST00000002596:exon2:c.T618C:p.F206F	Score=566;Name=lod=267	NA	4p15.33	Score=754;Name=V$MYOGNF1_01	NA	NA	NA	rs1047385	0.23	0.23	0.21	0.2498	0.1978	0.1796	0.1945	0.3192	0.3211	0.22	0.19	0.2	0.32	0.2332	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.651166	NA	NA	0.211279	0.292329	NA	0.246	NA	7.0243876
950	1	48688376	48688376	A	G	UTR5	SLC5A9	NM_001135181:c.-33A>G,NM_001011547:c.-33A>G	NA	NA	UTR5	ENSG00000117834	ENST00000438567:c.-33A>G,ENST00000533824:c.-33A>G,ENST00000425816:c.-33A>G,ENST00000236495:c.-33A>G	NA	NA	Score=429;Name=lod=74	NA	1p33	NA	Name=FOXA1_(SC-101058),FOXA2_(SC-6554),HEY1,HNF4G_(SC-6558),p300,CEBPB,TBP,TAF1,FOXA1_(C-20),HNF4A_(H-171),HNF4A,Pol2,SP1	Name=8	NA	rs41287916	0.06	0.06	0.046	0.0503195	0.1113	0.001	0.0648	0.0121	0.0798	0.11	0.0017	0.09	0.02	0.088	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.747225	NA	NA	0.109994	0.023844	NA	0.043	NA	7.0240394
950	9	140414410	140414410	C	T	exonic	PNPLA7	NA	nonsynonymous SNV	PNPLA7:NM_152286:exon10:c.G968A:p.R323Q,PNPLA7:NM_001098537:exon11:c.G1043A:p.R348Q	exonic	ENSG00000130653	NA	nonsynonymous SNV	ENSG00000130653:ENST00000277531:exon10:c.G968A:p.R323Q,ENSG00000130653:ENST00000434090:exon10:c.G941A:p.R314Q,ENSG00000130653:ENST00000406427:exon11:c.G1043A:p.R348Q	NA	NA	9q34.3	NA	NA	NA	NA	rs11137410	0.15	0.15	0.139	0.132588	0.0905	0.2143	0.0735	0.18	0.0695	0.1	0.2	0.08	0.21	0.115	0.21	0.72	T	0.01	B	0.002	B	0.003	N	1.000	P	0.51	N	3.43	T	-1.103	T	0.000	T	0.111	0.546	6.955	-0.136	0.072	-0.447	3.541	0.546168	NA	0.49	0.103953	0.17862	ID=COSM455661;OCCURENCE=1(breast)	0.21	NA	7.0238804
950	11	47857253	47857253	T	C	exonic	NUP160	NA	nonsynonymous SNV	NUP160:NM_015231:exon7:c.A1051G:p.T351A	exonic	ENSG00000030066	NA	nonsynonymous SNV	ENSG00000030066:ENST00000528071:exon5:c.A709G:p.T237A,ENSG00000030066:ENST00000378460:exon7:c.A1051G:p.T351A,ENSG00000030066:ENST00000530326:exon7:c.A709G:p.T237A	Score=496;Name=lod=138	NA	11p11.2	NA	NA	NA	NA	rs3816605	0.33	0.33	0.285	0.345847	0.4344	0.4355	0.3242	0.0847	0.5307	0.43	0.35	0.34	0.12	0.4164	0.46	0.74	T	0.0	B	0.004	B	0.006	N	0.000	P	1.5	L	0.94	T	-0.909	T	0.000	T	0.033	1.709	11.67	0.284	-0.207	0.663	6.931	1.708973	1.708973	0.12	0.458934	0.158337	NA	0.297	NA	7.0235994
950	4	11401087	11401087	A	G	exonic	HS3ST1	NA	synonymous SNV	HS3ST1:NM_005114:exon2:c.T543C:p.D181D	exonic	ENSG00000002587	NA	synonymous SNV	ENSG00000002587:ENST00000002596:exon2:c.T543C:p.D181D	Score=507;Name=lod=153	NA	4p15.33	Score=783;Name=V$PAX5_02	NA	NA	NA	rs1047389	0.23	0.23	0.205	0.251997	0.1978	0.1885	0.1945	0.3192	0.3231	0.22	0.19	0.2	0.32	0.2337	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.439786	NA	NA	0.211628	0.292102	NA	0.246	NA	7.0235386
950	19	14589378	14589378	C	T	exonic	GIPC1	NA	synonymous SNV	GIPC1:NM_202494:exon6:c.G561A:p.A187A,GIPC1:NM_202469:exon7:c.G561A:p.A187A,GIPC1:NM_202470:exon7:c.G852A:p.A284A,GIPC1:NM_202468:exon8:c.G852A:p.A284A,GIPC1:NM_005716:exon9:c.G852A:p.A284A	exonic	ENSG00000123159	NA	synonymous SNV	ENSG00000123159:ENST00000589631:exon4:c.G237A:p.A79A,ENSG00000123159:ENST00000393028:exon6:c.G561A:p.A187A,ENSG00000123159:ENST00000345425:exon7:c.G852A:p.A284A,ENSG00000123159:ENST00000591349:exon7:c.G561A:p.A187A,ENSG00000123159:ENST00000393029:exon8:c.G561A:p.A187A,ENSG00000123159:ENST00000586027:exon8:c.G852A:p.A284A,ENSG00000123159:ENST00000393033:exon9:c.G852A:p.A284A	Score=535;Name=lod=200	NA	19p13.12	Score=810;Name=V$YY1_02	NA	NA	NA	rs1127307	0.26	0.26	0.232	0.248203	0.2217	0.3036	0.2651	0.27	0.1769	0.2	0.33	0.28	0.26	0.2138	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.796146	1.796146	NA	0.207674	0.269178	NA	0.203	NA	7.0234926
950	17	78166385	78166385	C	T	exonic	CARD14	NA	synonymous SNV	CARD14:NM_052819:exon6:c.C612T:p.D204D,CARD14:NM_001257970:exon9:c.C1323T:p.D441D,CARD14:NM_024110:exon9:c.C1323T:p.D441D	exonic	ENSG00000141527	NA	stopgain	ENSG00000141527:ENST00000575500:exon10:c.C1255T:p.R419X	NA	NA	17q25.3	NA	NA	Name=25	NA	rs11658460	0.12	0.12	0.139	0.121406	0.1054	0.1696	0.0533	0.115	0.1452	0.11	0.18	0.05	0.12	0.113	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.766583	3.766583	NA	0.092791	0.120064	ID=COSM437728,COSM437729;OCCURENCE=1(breast)	0.138	NA	7.0221423
950	10	91066769	91066769	C	A	exonic	IFIT2	NA	nonsynonymous SNV	IFIT2:NM_001547:exon2:c.C1056A:p.D352E	exonic	ENSG00000119922	NA	nonsynonymous SNV	ENSG00000119922:ENST00000371826:exon2:c.C1056A:p.D352E	Score=363;Name=lod=40	NA	10q23.31	NA	NA	NA	NA	rs1727	0.87	0.87	0.895	0.878794	0.7624	0.9921	0.6916	0.9871	0.8681	0.77	0.99	0.71	0.98	0.8011	0.99	1	T	0.0	B	0.0	B	0.691	N	0.000	P	-1.355	N	1.46	T	-0.994	T	0.000	T	0.048	-0.454	1.897	2.19	0.138	0.637	7.374	-0.454146	NA	1	0.748308	0.949377	NA	0.746	NA	7.0215254
950	1	17087582	17087582	G	A	exonic	MST1L	NA	nonsynonymous SNV	MST1L:NM_001271733:exon2:c.C83T:p.S28L	ncRNA_exonic	ENSG00000186715	NA	NA	NA	Score=563;Name=lod=259	NA	1p36.13	NA	NA	NA	NA	rs10907280	NA	NA	0.223	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4796	NA	1	T	0.001	B	0.0	B	0.008	N	.	.	.	.	.	.	-0.961	T	0.037	T	0.364	-2.394	0.003	.	-0.000	1.671	.	-2.39371	NA	1	NA	NA	ID=COSM1499789;OCCURENCE=1(lung)	NA	NA	7.0204
950	5	79031372	79031372	G	C	exonic	CMYA5	NA	nonsynonymous SNV	CMYA5:NM_153610:exon2:c.G6784C:p.V2262L	exonic	ENSG00000164309	NA	nonsynonymous SNV	ENSG00000164309:ENST00000446378:exon2:c.G6784C:p.V2262L	NA	NA	5q14.1	NA	NA	NA	NA	rs6859595	0.28	0.28	0.333	0.271366	0.0815	0.3621	0.0821	0.5749	0.0971	0.08	0.41	0.08	0.61	0.1461	0.61	1	T	0.0	B	0.0	B	0.900	N	1.000	P	0.14	N	2.46	T	-0.915	T	0.000	T	0.024	-2.236	0.005	-1.29	0.147	-0.194	1.430	-2.236224	NA	1	0.085711	0.489421	NA	0.304	NA	7.0200224
950	22	36900271	36900271	T	C	exonic	FOXRED2	NA	nonsynonymous SNV	FOXRED2:NM_001102371:exon4:c.A923G:p.N308S,FOXRED2:NM_024955:exon4:c.A923G:p.N308S	exonic	ENSG00000100350	NA	nonsynonymous SNV	ENSG00000100350:ENST00000397223:exon3:c.A923G:p.N308S,ENSG00000100350:ENST00000216187:exon4:c.A923G:p.N308S,ENSG00000100350:ENST00000397224:exon4:c.A923G:p.N308S	NA	NA	22q12.3	NA	NA	NA	NA	rs2277841	0.67	0.67	0.671	0.649361	0.7823	0.2143	0.8127	0.9062	0.498	0.78	0.25	0.81	0.89	0.729	0.89	0.76	T	0.0	B	0.001	B	0.716	N	1.000	P	0.69	N	2.5	T	-1.033	T	0.000	T	0.002	-2.54	0.003	-6.48	-2.059	-0.320	6.693	-2.540449	NA	0.76	0.802093	0.894008	NA	0.783	NA	7.0199404
950	22	50928026	50928026	G	A	exonic	MIOX	NA	synonymous SNV	MIOX:NM_017584:exon9:c.G702A:p.L234L	exonic	ENSG00000100253	NA	synonymous SNV	ENSG00000100253:ENST00000451761:exon8:c.G642A:p.L214L,ENSG00000100253:ENST00000216075:exon9:c.G702A:p.L234L,ENSG00000100253:ENST00000395732:exon9:c.G702A:p.L234L	Score=472;Name=lod=110	NA	22q13.33	Score=955;Name=V$AP4_Q6	NA	NA	NA	rs2232885	0.22	0.22	0.219	0.197484	0.2137	0.3125	0.2176	0.1225	0.1493	0.22	0.31	0.22	0.14	0.2166	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.148519	NA	NA	0.216566	0.148839	NA	NA	NA	7.0198006
950	16	633353	633353	T	C	exonic	PIGQ	NA	nonsynonymous SNV	PIGQ:NM_148920:exon10:c.T2002C:p.C668R	exonic	ENSG00000007541	NA	nonsynonymous SNV	ENSG00000007541:ENST00000026218:exon10:c.T2002C:p.C668R	NA	NA	16p13.3	NA	NA	NA	NA	rs710924	0.47	0.47	0.475	0.530551	0.4324	0.6379	0.4885	0.4743	0.6268	0.41	0.57	0.47	0.47	0.4911	0.57	.	.	0.0	B	0.0	B	.	.	1.000	P	0	N	1.94	T	-0.954	T	0.000	T	0.043	-1.571	0.015	1.29	-0.082	-2.893	5.103	-1.571008	NA	0.78	0.390181	0.44707	ID=COSM1128914;OCCURENCE=1(prostate)	NA	NA	7.0196524
950	6	12123249	12123249	A	G	exonic	HIVEP1	NA	nonsynonymous SNV	HIVEP1:NM_002114:exon4:c.A3221G:p.N1074S	exonic	ENSG00000095951	NA	nonsynonymous SNV	ENSG00000095951:ENST00000379388:exon4:c.A3221G:p.N1074S	NA	NA	6p24.1	NA	NA	NA	NA	rs2228220	0.13	0.13	0.13	0.147165	0.1163	0.13	0.1009	0.1793	0.1861	0.11	0.11	0.11	0.18	0.1098	0.18	.	.	0.011	B	0.005	B	0.637	N	1.000	P	0.51	N	1.66	T	-0.976	T	0.015	T	0.005	-1.697	0.011	-0.523	-0.314	-0.027	4.924	-1.696664	NA	0.65	0.088479	0.153394	NA	0.196	NA	7.0187544
950	5	79029288	79029288	C	A	exonic	CMYA5	NA	nonsynonymous SNV	CMYA5:NM_153610:exon2:c.C4700A:p.A1567E	exonic	ENSG00000164309	NA	nonsynonymous SNV	ENSG00000164309:ENST00000446378:exon2:c.C4700A:p.A1567E	NA	NA	5q14.1	NA	NA	NA	NA	rs1428223	0.29	0.29	0.321	0.276158	0.0815	0.3621	0.085	0.5915	0.0971	0.08	0.41	0.09	0.62	0.147	0.62	0.59	T	0.013	B	0.01	B	0.531	N	1.000	P	0.77	N	3.73	T	-1.025	T	0.000	T	0.054	2.007	12.67	0.655	0.381	-0.731	3.625	2.006665	2.006665	1	0.086403	0.496065	ID=COSM149868;OCCURENCE=1(stomach)	0.319	NA	7.0184304
950	11	18159254	18159254	A	G	exonic	MRGPRX3	NA	nonsynonymous SNV	MRGPRX3:NM_054031:exon3:c.A505G:p.N169D	exonic	ENSG00000179826	NA	nonsynonymous SNV	ENSG00000179826:ENST00000531264:exon2:c.A505G:p.N169D,ENSG00000179826:ENST00000396275:exon3:c.A505G:p.N169D	NA	NA	11p15.1	NA	NA	NA	NA	rs4274188	0.77	0.77	0.733	0.743011	0.7773	0.874	0.8357	0.5371	0.7853	0.79	0.92	0.82	0.54	0.7697	0.92	1	T	0.0	B	0.001	B	0.010	N	1.000	P	-0.905	N	1.4	T	-0.975	T	0.000	T	0.01	-1.881	0.008	-1.77	-1.182	-2.235	7.827	-1.880533	NA	1	0.768111	0.579545	NA	0.703	NA	7.0182224
950	5	79033306	79033306	A	C	exonic	CMYA5	NA	nonsynonymous SNV	CMYA5:NM_153610:exon2:c.A8718C:p.K2906N	exonic	ENSG00000164309	NA	nonsynonymous SNV	ENSG00000164309:ENST00000446378:exon2:c.A8718C:p.K2906N	NA	NA	5q14.1	NA	NA	NA	NA	rs2278239	0.28	0.28	0.334	0.267372	0.0815	0.3621	0.0807	0.5605	0.0971	0.08	0.41	0.08	0.6	0.1464	0.6	0.09	T	0.144	B	0.035	B	0.408	N	1.000	P	1.1	L	1.16	T	-0.959	T	0.000	T	0.017	0.288	5.559	-0.131	-0.026	0.658	2.281	0.287917	NA	0.17	0.087238	0.483101	NA	0.29	NA	7.0181954
950	3	174814920	174814920	A	G	exonic	NAALADL2	NA	nonsynonymous SNV	NAALADL2:NM_207015:exon2:c.A384G:p.I128M	exonic	ENSG00000177694	NA	nonsynonymous SNV	ENSG00000177694:ENST00000454872:exon2:c.A384G:p.I128M,ENSG00000177694:ENST00000434257:exon4:c.A333G:p.I111M	Score=448;Name=lod=88	NA	3q26.31	NA	NA	NA	NA	rs9836841	0.4	0.4	0.378	0.396366	0.4433	0.4375	0.4524	0.2912	0.408	0.43	0.41	0.48	0.3	0.4223	0.48	0.13	T	0.083	B	0.017	B	0.021	N	1.000	P	0.205	N	1.42	T	-0.906	T	0.000	T	0.081	-0.557	1.481	-1.48	-0.076	-0.003	6.192	-0.557312	NA	0.08	0.450147	0.282407	NA	0.29	NA	7.0175864
950	12	123825559	123825559	C	T	exonic	SBNO1	NA	synonymous SNV	SBNO1:NM_001167856:exon4:c.G627A:p.K209K,SBNO1:NM_018183:exon4:c.G624A:p.K208K	exonic	ENSG00000139697	NA	synonymous SNV	ENSG00000139697:ENST00000267176:exon4:c.G624A:p.K208K,ENSG00000139697:ENST00000420886:exon4:c.G627A:p.K209K,ENSG00000139697:ENST00000602398:exon5:c.G627A:p.K209K,ENSG00000139697:ENST00000602750:exon5:c.G624A:p.K208K	Score=620;Name=lod=440	NA	12q24.31	Score=816;Name=V$OCT_C	NA	NA	NA	rs12322888	0.22	0.22	0.232	0.245407	0.2247	0.003	0.2233	0.4887	0.2035	0.23	NA	0.24	0.45	0.2248	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.119621	NA	NA	0.200814	0.45143	NA	0.312	NA	7.0163526
950	4	187628398	187628398	C	G	exonic	FAT1	NA	nonsynonymous SNV	FAT1:NM_005245:exon2:c.G2584C:p.V862L	exonic	ENSG00000083857	NA	nonsynonymous SNV	ENSG00000083857:ENST00000441802:exon2:c.G2584C:p.V862L	NA	NA	4q35.2	NA	NA	NA	NA	rs1877731	0.68	0.68	0.676	0.689097	0.7753	0.502	0.6974	0.7035	0.7679	0.77	0.5	0.74	0.7	0.746	0.8	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-0.815	N	0.95	T	-0.935	T	0.000	T	0.028	-2.294	0.004	3.06	0.228	1.610	11.374	-2.293665	NA	1	0.795732	0.734183	NA	0.739	NA	7.0163014
950	12	70953277	70953277	T	C	exonic	PTPRB	NA	synonymous SNV	PTPRB:NM_001206971:exon15:c.A3636G:p.A1212A,PTPRB:NM_001206972:exon15:c.A3636G:p.A1212A,PTPRB:NM_002837:exon16:c.A3906G:p.A1302A,PTPRB:NM_001109754:exon18:c.A4560G:p.A1520A	exonic	ENSG00000127329	NA	synonymous SNV	ENSG00000127329:ENST00000451516:exon15:c.A3636G:p.A1212A,ENSG00000127329:ENST00000538708:exon15:c.A3636G:p.A1212A,ENSG00000127329:ENST00000550857:exon15:c.A3636G:p.A1212A,ENSG00000127329:ENST00000261266:exon16:c.A3906G:p.A1302A,ENSG00000127329:ENST00000550358:exon17:c.A4296G:p.A1432A,ENSG00000127329:ENST00000334414:exon18:c.A4560G:p.A1520A,ENSG00000127329:ENST00000548122:exon18:c.A4197G:p.A1399A,ENSG00000127329:ENST00000551525:exon18:c.A4557G:p.A1519A	NA	NA	12q15	Score=758;Name=V$STAT3_01	Name=MafK_(ab50322),MafK_(SC-477),MafF_(M8194)	NA	NA	rs2303963	0.18	0.18	0.181	0.200879	0.2147	0.1369	0.1499	0.1853	0.3098	0.22	0.13	0.14	0.19	0.2162	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.310638	NA	NA	0.219813	0.176042	NA	0.232	NA	7.0159536
950	11	47185680	47185680	G	A	exonic	C11orf49	NA	synonymous SNV	C11orf49:NM_001003678:exon9:c.G858A:p.Q286Q	exonic	ENSG00000149179	NA	synonymous SNV	ENSG00000149179:ENST00000378618:exon9:c.G858A:p.Q286Q	Score=355;Name=lod=37	NA	11p11.2	NA	Name=Pol2-4H8,Pol2(phosphoS2),Pol2	NA	NA	rs11039114	0.13	0.13	0.138	0.154952	0.2276	0.0744	0.1254	0.0174	0.3701	0.24	0.09	0.13	0.02	0.2011	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.087332	NA	NA	0.222843	0.047933	NA	0.08	NA	7.0151236
951	15	78390414	78390414	T	C	exonic	SH2D7	NA	nonsynonymous SNV	SH2D7:NM_001101404:exon3:c.T410C:p.M137T	exonic	ENSG00000183476	NA	nonsynonymous SNV	ENSG00000183476:ENST00000328828:exon3:c.T410C:p.M137T,ENSG00000183476:ENST00000409568:exon3:c.T2C:p.M1T	Score=472;Name=lod=111	NA	15q25.1	NA	NA	NA	NA	rs2289524	0.42	0.42	0.426	0.417732	0.4493	0.252	0.3415	0.5287	0.4601	0.45	0.28	0.41	0.53	0.4448	0.53	0.99	T	0.0	B	0.0	B	.	.	0.000	P	-0.47	N	1.49	T	-0.915	T	0.000	T	0.046	0.158	4.851	1.28	0.420	0.337	4.785	0.158248	NA	0	0.42447	0.516507	NA	0.355	NA	7.0147634
951	7	50467767	50467767	C	A	exonic	IKZF1	NA	synonymous SNV	IKZF1:NM_001220772:exon3:c.C192A:p.P64P,IKZF1:NM_001220775:exon4:c.C327A:p.P109P,IKZF1:NM_001220776:exon4:c.C297A:p.P99P,IKZF1:NM_001220771:exon5:c.C573A:p.P191P,IKZF1:NM_001220773:exon5:c.C453A:p.P151P,IKZF1:NM_001220774:exon5:c.C423A:p.P141P,IKZF1:NM_001220768:exon6:c.C741A:p.P247P,IKZF1:NM_001220769:exon6:c.C615A:p.P205P,IKZF1:NM_001220770:exon6:c.C585A:p.P195P,IKZF1:NM_001220765:exon7:c.C876A:p.P292P,IKZF1:NM_001220766:exon7:c.C741A:p.P247P,IKZF1:NM_001220767:exon7:c.C711A:p.P237P,IKZF1:NM_006060:exon8:c.C1002A:p.P334P	exonic	ENSG00000185811	NA	synonymous SNV	ENSG00000185811:ENST00000346667:exon4:c.C312A:p.P104P,ENSG00000185811:ENST00000349824:exon5:c.C573A:p.P191P,ENSG00000185811:ENST00000357364:exon6:c.C741A:p.P247P,ENSG00000185811:ENST00000343574:exon7:c.C741A:p.P247P,ENSG00000185811:ENST00000359197:exon7:c.C876A:p.P292P,ENSG00000185811:ENST00000438033:exon7:c.C741A:p.P247P,ENSG00000185811:ENST00000439701:exon7:c.C876A:p.P292P,ENSG00000185811:ENST00000331340:exon8:c.C1002A:p.P334P	Score=467;Name=lod=105	NA	7p12.2	Score=767;Name=V$PAX5_01	NA	NA	NA	rs61731355	0.14	0.14	0.14	0.148962	0.2296	0.0546	0.196	0.0908	0.2086	0.21	0.05	0.18	0.11	0.2377	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.499084	NA	NA	0.184767	0.099603	ID=COSM453203;OCCURENCE=1(breast)	0.225	NA	7.0145996
951	6	117243260	117243260	T	C	exonic	RFX6	NA	synonymous SNV	RFX6:NM_173560:exon13:c.T1383C:p.T461T	exonic	ENSG00000185002	NA	synonymous SNV	ENSG00000185002:ENST00000332958:exon13:c.T1383C:p.T461T	Score=666;Name=lod=679	NA	6q22.1	NA	NA	NA	NA	rs7764347	0.29	0.29	0.28	0.339257	0.2217	0.4226	0.2939	0.2935	0.4683	0.22	0.41	0.28	0.27	0.2527	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.962892	NA	NA	0.177907	0.280754	NA	0.319	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118179.2;CLNDSDB=.;CLNDSDBID=.	7.0143596
951	11	117096652	117096652	G	A	exonic	PCSK7	NA	synonymous SNV	PCSK7:NM_004716:exon6:c.C855T:p.S285S	exonic	ENSG00000160613	NA	synonymous SNV	ENSG00000160613:ENST00000525027:exon4:c.C855T:p.S285S,ENSG00000160613:ENST00000320934:exon6:c.C855T:p.S285S	Score=599;Name=lod=364	NA	11q23.3	Score=822;Name=V$COMP1_01	NA	NA	NA	rs2277287	0.22	0.22	0.232	0.249401	0.1928	0.1508	0.2666	0.3381	0.2771	0.19	0.18	0.22	0.3	0.2517	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.589832	1.589832	NA	0.208101	0.302817	NA	0.152	NA	7.0140656
951	2	18757501	18757501	G	C	exonic	NT5C1B,NT5C1B-RDH14	NA	synonymous SNV	NT5C1B-RDH14:NM_001199103:exon8:c.C1284G:p.L428L,NT5C1B:NM_033253:exon8:c.C1278G:p.L426L,NT5C1B:NM_001002006:exon9:c.C1458G:p.L486L,NT5C1B:NM_001199086:exon9:c.C1407G:p.L469L,NT5C1B:NM_001199087:exon9:c.C1509G:p.L503L,NT5C1B:NM_001199088:exon9:c.C1464G:p.L488L,NT5C1B-RDH14:NM_001199104:exon9:c.C1458G:p.L486L	exonic	ENSG00000185013,ENSG00000250741	NA	synonymous SNV	ENSG00000185013:ENST00000304081:exon8:c.C1278G:p.L426L,ENSG00000250741:ENST00000444297:exon8:c.C1284G:p.L428L,ENSG00000185013:ENST00000359846:exon9:c.C1458G:p.L486L,ENSG00000250741:ENST00000532967:exon9:c.C1458G:p.L486L,ENSG00000185013:ENST00000600945:exon9:c.C1458G:p.L486L	Score=499;Name=lod=142	NA	2p24.2	NA	NA	NA	NA	rs3902946	0.3	0.3	0.33	0.314297	0.1948	0.1081	0.3127	0.6649	0.1769	0.21	0.11	0.29	0.66	0.2491	0.66	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.953	T	0.000	T	.	-1.001	0.259	1.98	0.324	-0.321	6.944	-1.000911	NA	NA	0.208837	0.588062	NA	0.297	NA	7.0139296
951	8	107782335	107782335	G	A	exonic	ABRA	NA	synonymous SNV	ABRA:NM_139166:exon1:c.C84T:p.S28S	exonic	ENSG00000174429	NA	synonymous SNV	ENSG00000174429:ENST00000311955:exon1:c.C84T:p.S28S	Score=470;Name=lod=108	NA	8q23.1	Score=861;Name=V$E2F_03	NA	NA	NA	rs11996457	0.26	0.26	0.304	0.280551	0.2247	0.1944	0.1686	0.5378	0.1585	0.21	0.18	0.18	0.51	0.2179	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.807719	NA	NA	0.211047	0.471857	ID=COSM1178517;OCCURENCE=1(prostate)	0.29	NA	7.0130196
951	19	35719020	35719020	C	T	exonic	FAM187B	NA	stopgain	FAM187B:NM_152481:exon1:c.G564A:p.W188X	exonic	ENSG00000177558	NA	stopgain	ENSG00000177558:ENST00000324675:exon1:c.G564A:p.W188X	NA	NA	19q13.12	NA	NA	NA	NA	rs541169	0.28	0.28	0.265	0.318291	0.3221	0.1746	0.3487	0.3124	0.4489	0.31	0.16	0.36	0.3	0.3372	0.36	0.26	T	.	.	.	.	0.943	N	0.000	P	.	.	.	.	.	.	.	.	.	3.339	17.24	1.22	0.236	0.391	3.618	3.338827	3.338827	0.17	0.328256	0.319791	NA	0.283	NA	7.012444
951	7	64291976	64291976	G	A	exonic	ZNF138	NA	nonsynonymous SNV	ZNF138:NM_006524:exon3:c.G278A:p.G93E,ZNF138:NM_001271638:exon4:c.G260A:p.G87E,ZNF138:NM_001271639:exon4:c.G356A:p.G119E	exonic	ENSG00000197008	NA	nonsynonymous SNV	ENSG00000197008:ENST00000397136:exon2:c.G185A:p.G62E,ENSG00000197008:ENST00000440155:exon3:c.G278A:p.G93E,ENSG00000197008:ENST00000307355:exon4:c.G356A:p.G119E,ENSG00000197008:ENST00000359735:exon4:c.G185A:p.G62E,ENSG00000197008:ENST00000437743:exon4:c.G260A:p.G87E	NA	NA	7q11.21	NA	NA	NA	NA	rs10949946	0.36	0.36	0.332	0.327077	0.4463	0.3829	0.4308	0.1316	0.3374	0.43	0.4	0.45	0.14	0.4141	0.46	0.18	T	0.001	B	0.005	B	.	.	1.000	P	0.055	N	3.58	T	-0.948	T	0.000	T	0.091	-0.943	0.355	-1.7	-1.056	-0.464	5.000	-0.942902	NA	0.12	0.460698	0.175068	ID=COSM150303;OCCURENCE=1(stomach)	0.449	NA	7.0122354
951	10	17152994	17152994	G	A	exonic	CUBN	NA	synonymous SNV	CUBN:NM_001081:exon9:c.C939T:p.N313N	exonic	ENSG00000107611	NA	synonymous SNV	ENSG00000107611:ENST00000377833:exon9:c.C939T:p.N313N	Score=446;Name=lod=87	NA	10p13	NA	Name=CTCF	NA	NA	rs1801223	0.23	0.23	0.24	0.214856	0.2584	0.25	0.2262	0.1944	0.1534	0.26	0.26	0.23	0.15	0.21	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.112128	NA	NA	0.18686	0.216977	NA	0.188	NA	7.0114066
951	11	6221169	6221169	A	G	exonic	OR52W1	NA	nonsynonymous SNV	OR52W1:NM_001005178:exon1:c.A716G:p.H239R	exonic	ENSG00000175485	NA	nonsynonymous SNV	ENSG00000175485:ENST00000311352:exon1:c.A716G:p.H239R	NA	NA	11p15.4	NA	NA	NA	NA	rs10839531	0.71	0.71	0.681	0.678315	0.7932	0.9593	0.7522	0.2481	0.7996	0.79	0.96	0.79	0.25	0.7559	0.96	1	T	0.0	B	0.0	B	0.036	N	1.000	P	-2.84	N	9.43	T	-0.983	T	0.000	T	0.028	-2.951	0.001	2.72	0.280	2.889	8.326	-2.950738	NA	1	0.773161	0.329169	NA	0.696	NA	7.0110724
951	12	52661192	52661192	A	G	intergenic	KRT7,KRT81	dist=18483;dist=18505	NA	NA	intronic	ENSG00000170442	NA	NA	NA	Score=295;Name=lod=21	NA	12q13.13	NA	NA	NA	NA	rs1870222	0.78	0.78	0.791	0.797524	0.841	0.6974	0.7262	0.8608	0.8211	0.84	0.68	0.68	0.88	0.8147	0.88	0	D	.	.	.	.	.	.	.	.	.	.	.	.	-1.064	T	0.000	T	.	0.468	6.538	2.94	0.513	3.239	7.397	0.467569	NA	NA	NA	NA	NA	0.891	NA	7.0109667
951	15	31197564	31197564	G	A	exonic	FAN1	NA	nonsynonymous SNV	FAN1:NM_001146094:exon2:c.G698A:p.G233E,FAN1:NM_001146095:exon2:c.G698A:p.G233E,FAN1:NM_001146096:exon2:c.G698A:p.G233E,FAN1:NM_014967:exon2:c.G698A:p.G233E	exonic	ENSG00000198690	NA	nonsynonymous SNV	ENSG00000198690:ENST00000362065:exon2:c.G698A:p.G233E,ENSG00000198690:ENST00000561594:exon2:c.G698A:p.G233E,ENSG00000198690:ENST00000561607:exon2:c.G698A:p.G233E,ENSG00000198690:ENST00000565280:exon2:c.G698A:p.G233E,ENSG00000198690:ENST00000565466:exon2:c.G698A:p.G233E	NA	NA	15q13.2	NA	NA	NA	NA	rs4779794	0.45	0.45	0.44	0.422524	0.4374	0.7679	0.4539	0.0401	0.546	0.45	0.8	0.43	0.06	0.4594	0.8	1	T	0.418	B	0.121	B	0.789	N	1.000	P	1.87	L	1.01	T	-0.903	T	0.000	T	0.07	-0.452	1.907	-2.16	-0.319	-0.063	6.106	-0.451723	NA	0.59	0.425698	0.112171	NA	0.478	NA	7.0108354
951	11	5602968	5602968	G	A	exonic	OR52B6	NA	nonsynonymous SNV	OR52B6:NM_001005162:exon1:c.G862A:p.V288I	exonic	ENSG00000187747	NA	nonsynonymous SNV	ENSG00000187747:ENST00000345043:exon1:c.G862A:p.V288I	NA	NA	11p15.4	Score=678;Name=V$P53_01	NA	NA	NA	rs10769086	0.89	0.89	0.903	0.894569	0.7604	0.9931	0.8833	0.969	0.8384	0.76	0.99	0.88	0.97	0.8101	0.99	1	T	0.002	B	0.009	B	0.001	N	1.000	P	-0.15	N	8.74	T	-0.903	T	0.000	T	0.021	-2.538	0.003	0.634	-0.330	-1.782	0.879	-2.537708	NA	0.89	0.753481	0.949597	NA	0.819	NA	7.0093524
951	5	180687212	180687212	C	T	exonic	TRIM52	NA	synonymous SNV	TRIM52:NM_032765:exon1:c.G603A:p.L201L	exonic	ENSG00000183718	NA	synonymous SNV	ENSG00000183718:ENST00000327767:exon1:c.G603A:p.L201L	Score=389;Name=lod=51	NA	5q35.3	NA	NA	Name=9	NA	rs918388	0.18	0.18	0.188	0.197284	0.2256	0.0665	0.1859	0.3003	0.1718	0.21	0.03	0.18	0.29	0.2054	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.233197	NA	NA	0.226628	0.283023	NA	0.174	NA	7.0090386
951	14	21623290	21623290	T	C	exonic	OR5AU1	NA	nonsynonymous SNV	OR5AU1:NM_001004731:exon1:c.A895G:p.I299V	exonic	ENSG00000169327	NA	nonsynonymous SNV	ENSG00000169327:ENST00000304418:exon1:c.A895G:p.I299V	NA	NA	14q11.2	NA	NA	NA	NA	rs7145814	0.72	0.72	0.721	0.723243	0.7942	0.496	0.696	0.851	0.7311	0.79	0.49	0.73	0.85	0.7429	0.85	1	T	0.0	B	0.0	B	.	.	1.000	P	-1.58	N	9.46	T	-0.953	T	0.000	T	0.057	-2.064	0.006	2.63	0.160	1.190	9.110	-2.064153	NA	1	0.788488	0.817975	NA	0.754	NA	7.0077454
951	18	28722039	28722039	G	A	exonic	DSC1	NA	synonymous SNV	DSC1:NM_004948:exon9:c.C1183T:p.L395L,DSC1:NM_024421:exon9:c.C1183T:p.L395L	exonic	ENSG00000134765	NA	synonymous SNV	ENSG00000134765:ENST00000257197:exon9:c.C1183T:p.L395L,ENSG00000134765:ENST00000257198:exon9:c.C1183T:p.L395L	Score=455;Name=lod=94	NA	18q12.1	NA	NA	Name=3	NA	rs2577075	0.37	0.37	0.369	0.344649	0.2127	0.5655	0.3746	0.4085	0.1452	0.2	0.57	0.35	0.4	0.2591	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.873084	NA	NA	0.187209	0.401725	NA	0.254	NA	7.0076576
951	6	150346532	150346532	T	C	exonic	RAET1L	NA	nonsynonymous SNV	RAET1L:NM_130900:exon1:c.A76G:p.R26G	exonic	ENSG00000155918	NA	nonsynonymous SNV	ENSG00000155918:ENST00000286380:exon1:c.A76G:p.R26G,ENSG00000155918:ENST00000367341:exon1:c.A76G:p.R26G	NA	NA	6q25.1	NA	Name=HA-E2F1	NA	NA	rs1543547	0.4	0.4	0.372	0.405152	0.4523	0.245	0.4035	0.4902	0.408	0.46	0.21	0.46	0.49	0.4236	0.49	0.38	T	0.0	B	0.0	B	.	.	1.000	P	-1.245	N	5.77	T	-1.095	T	0.000	T	0.026	-2.352	0.004	0.428	-0.417	-1.048	.	-2.352112	NA	1	0.450116	0.473899	NA	0.42	NA	7.0073174
951	22	20942192	20942192	G	A	downstream	MED15	NA	NA	NA	ncRNA_exonic	ENSG00000250261	NA	NA	NA	Score=352;Name=lod=36	NA	22q11.21	Score=940;Name=V$AREB6_03	Name=Pol2-4H8	NA	NA	rs11913826	0.09	0.09	0.07	0.0589058	0.16	NA	0.0922	0.0363	0.0225	0.16	NA	0.11	0.05	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.136348	2.136348	NA	NA	NA	NA	0.109	NA	7.0066666
951	12	55714876	55714876	C	G	exonic	OR6C1	NA	nonsynonymous SNV	OR6C1:NM_001005182:exon1:c.C493G:p.H165D	exonic	ENSG00000205330	NA	nonsynonymous SNV	ENSG00000205330:ENST00000379668:exon1:c.C493G:p.H165D	NA	NA	12q13.2	NA	NA	NA	NA	rs7132347	0.81	0.81	0.8	0.780152	0.7753	0.8591	0.7695	0.8328	0.6401	0.77	0.88	0.78	0.83	0.7666	0.88	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-1.075	N	8.75	T	-0.967	T	0.000	T	0.058	-2.184	0.005	3.73	0.578	-1.489	5.223	-2.184396	NA	1	0.78495	0.830609	NA	0.848	NA	7.0064834
951	12	55715119	55715119	G	A	exonic	OR6C1	NA	nonsynonymous SNV	OR6C1:NM_001005182:exon1:c.G736A:p.V246I	exonic	ENSG00000205330	NA	nonsynonymous SNV	ENSG00000205330:ENST00000379668:exon1:c.G736A:p.V246I	NA	NA	12q13.2	NA	NA	NA	NA	rs7132916	0.81	0.81	0.808	0.780351	0.7753	0.8542	0.7695	0.8359	0.6421	0.77	0.88	0.78	0.83	0.767	0.88	0.37	T	0.0	B	0.006	B	0.004	N	1.000	P	2.06	M	8.04	T	-0.910	T	0.000	T	0.04	0.006	4.045	-0.5	-0.225	-0.994	1.375	0.005984	NA	0.33	0.784884	0.832274	NA	0.848	NA	7.0061494
951	10	135438955	135438955	C	T	exonic	FRG2B	NA	nonsynonymous SNV	FRG2B:NM_001080998:exon4:c.G485A:p.R162Q	exonic	ENSG00000225899	NA	nonsynonymous SNV	ENSG00000225899:ENST00000425520:exon4:c.G485A:p.R162Q,ENSG00000225899:ENST00000443774:exon4:c.G488A:p.R163Q	NA	NA	10q26.3	NA	NA	NA	NA	rs201563622	NA	NA	0.185	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3272	0.011	0.17	T	0.003	B	0.002	B	0.087	N	1.000	N	0.805	L	0.7	T	-1.031	T	0.089	T	0.074	1.019	9.163	.	0.119	-0.834	.	1.019099	NA	0.16	NA	NA	NA	0.007	CLINSIG=other;CLNDBN=Malignant_melanoma;CLNREVSTAT=not;CLNACC=RCV000068868.2;CLNDSDB=MedGen:SNOMED_CT;CLNDSDBID=C0025202:2092003	7.0061334
951	19	580665	580665	T	C	exonic	BSG	NA	synonymous SNV	BSG:NM_198591:exon3:c.T135C:p.A45A,BSG:NM_198589:exon4:c.T327C:p.A109A,BSG:NM_198590:exon4:c.T48C:p.A16A,BSG:NM_001728:exon5:c.T675C:p.A225A	exonic	ENSG00000172270	NA	synonymous SNV	ENSG00000172270:ENST00000346916:exon3:c.T135C:p.A45A,ENSG00000172270:ENST00000353555:exon4:c.T327C:p.A109A,ENSG00000172270:ENST00000545507:exon4:c.T48C:p.A16A,ENSG00000172270:ENST00000573216:exon4:c.T303C:p.A101A,ENSG00000172270:ENST00000573784:exon4:c.T48C:p.A16A,ENSG00000172270:ENST00000576984:exon4:c.T48C:p.A16A,ENSG00000172270:ENST00000333511:exon5:c.T675C:p.A225A	NA	NA	19p13.3	NA	Name=ZNF263	Name=2	NA	rs4682	0.3	0.3	0.257	0.326478	0.1899	0.4563	0.2853	0.3275	0.3609	0.18	0.46	0.26	0.31	0.2561	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.317886	NA	NA	0.214535	0.292821	ID=COSM440502,COSM440503;OCCURENCE=2(breast)	0.275	NA	7.0061316
951	7	99955866	99955866	G	A	UTR5	PILRB	NM_178238:c.-60G>A	NA	NA	exonic	ENSG00000121716	NA	nonsynonymous SNV	ENSG00000121716:ENST00000448382:exon6:c.G307A:p.A103T,ENSG00000121716:ENST00000455145:exon6:c.G307A:p.A103T	NA	NA	7q22.1	NA	NA	Name=3	NA	rs61735533	0.1	0.1	0.105	0.103235	0.1759	0.0278	0.1023	0.1014	0.1094	0.18	0.02	0.1	0.09	0.152	0.18	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-1.046	T	0.000	T	0.117	1.931	12.41	1.24	0.450	0.277	4.659	1.930732	1.930732	0.28	NA	NA	NA	0.116	NA	7.0054334
952	17	81006629	81006629	C	T	exonic	B3GNTL1	NA	synonymous SNV	B3GNTL1:NM_001009905:exon2:c.G93A:p.P31P	exonic	ENSG00000175711	NA	synonymous SNV	ENSG00000175711:ENST00000320865:exon2:c.G93A:p.P31P,ENSG00000175711:ENST00000571218:exon2:c.G93A:p.P31P	NA	NA	17q25.3	NA	Name=eGFP-JunD,TCF4,PU.1,Pol2,ELF1_(SC-631),CEBPB,p300,Pol2(b),JunD,FOSL2,Pol2-4H8,c-Fos,c-Jun,STAT3,eGFP-FOS,HEY1,TBP	Name=128	NA	rs7406119	0.21	0.21	0.209	0.193291	0.2177	0.2073	0.1628	0.2194	0.1401	0.22	0.22	0.17	0.19	0.2023	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.736699	NA	NA	0.241977	0.199955	NA	0.254	NA	7.0046896
952	22	50664612	50664612	A	G	exonic	TUBGCP6	NA	nonsynonymous SNV	TUBGCP6:NM_020461:exon9:c.T1700C:p.L567S	exonic	ENSG00000128159	NA	nonsynonymous SNV	ENSG00000128159:ENST00000248846:exon9:c.T1700C:p.L567S,ENSG00000128159:ENST00000439308:exon9:c.T1700C:p.L567S	NA	NA	22q13.33	NA	NA	NA	NA	rs4838865	0.82	0.82	0.839	0.858826	0.7773	0.8492	0.6902	0.9849	0.9018	0.77	0.83	0.71	0.98	0.7912	0.98	0.43	T	0.005	B	0.007	B	0.604	N	1.000	P	-0.69	N	3.31	T	-1.069	T	0.000	T	0.029	-0.852	0.544	-5.69	-1.647	0.685	4.432	-0.852497	NA	0.41	0.760349	0.949387	NA	0.848	NA	7.0044844
952	17	39634625	39634625	A	G	exonic	KRT35	NA	synonymous SNV	KRT35:NM_002280:exon5:c.T987C:p.A329A	exonic	ENSG00000197079	NA	synonymous SNV	ENSG00000197079:ENST00000246639:exon5:c.T897C:p.A299A,ENSG00000197079:ENST00000393989:exon5:c.T987C:p.A329A	Score=542;Name=lod=213	NA	17q21.2	NA	Name=CTCF	Name=5	NA	rs7216017	0.53	0.53	0.53	0.576078	0.5398	0.3403	0.5591	0.736	0.6524	0.54	0.3	0.61	0.74	0.5784	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.726443	NA	NA	0.54407	0.703586	NA	0.594	NA	7.0043966
952	6	117246719	117246719	C	T	exonic	RFX6	NA	synonymous SNV	RFX6:NM_173560:exon16:c.C1782T:p.H594H	exonic	ENSG00000185002	NA	synonymous SNV	ENSG00000185002:ENST00000332958:exon16:c.C1782T:p.H594H	NA	NA	6q22.1	Score=913;Name=V$NMYC_01	NA	NA	NA	rs4946206	0.3	0.3	0.287	0.340855	0.2286	0.4236	0.2911	0.2958	0.4673	0.23	0.41	0.27	0.29	0.2558	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.85528	NA	NA	0.177907	0.284158	NA	0.319	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118181.2;CLNDSDB=.;CLNDSDBID=.	7.0043596
952	4	121957559	121957559	G	A	exonic	NDNF	NA	synonymous SNV	NDNF:NM_024574:exon4:c.C1567T:p.L523L	exonic	ENSG00000173376	NA	synonymous SNV	ENSG00000173376:ENST00000379692:exon4:c.C1567T:p.L523L	Score=617;Name=lod=430	NA	4q27	Score=838;Name=V$FAC1_01	NA	NA	NA	rs34766411	0.23	0.23	0.21	0.246406	0.2058	0.2351	0.3429	0.1755	0.3272	0.22	0.22	0.31	0.2	0.2477	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000364	NA	NA	0.210116	0.187926	NA	0.217	NA	7.0030506
952	2	74159734	74159734	T	C	intronic	DGUOK	NA	NA	NA	exonic	ENSG00000114956	NA	nonsynonymous SNV	ENSG00000114956:ENST00000356837:exon2:c.T152C:p.L51P	NA	NA	2p13.1	NA	NA	NA	NA	rs6737156	0.05	0.05	0.057	0.0684904	0.0408	0.001	0.036	0.1536	0.0746	0.04	NA	0.04	0.15	0.0933	0.15	0.06	T	.	.	.	.	.	.	1.000	N	.	.	-5.11	D	-0.476	T	0.049	T	0.111	0.608	7.273	-0.965	-0.141	-0.294	5.766	0.607539	NA	0.01	0.03002	0.113272	NA	0.065	NA	7.0025467
952	12	66725160	66725160	C	T	exonic	HELB	NA	nonsynonymous SNV	HELB:NM_033647:exon12:c.C2897T:p.P966L	exonic	ENSG00000127311	NA	nonsynonymous SNV	ENSG00000127311:ENST00000247815:exon12:c.C2897T:p.P966L,ENSG00000127311:ENST00000545134:exon12:c.C2897T:p.P966L	NA	NA	12q14.3	NA	NA	NA	NA	rs1185244	0.5	0.5	0.463	0.477835	0.4205	0.5585	0.6138	0.382	0.4867	0.43	0.59	0.57	0.43	0.4793	0.59	.	.	0.016	B	0.002	B	0.520	N	1.000	P	1.04	L	2.72	T	-0.986	T	0.000	T	0.084	0.82	8.303	2.41	0.216	0.076	7.300	0.820277	NA	0.2	0.431628	0.38266	NA	0.493	NA	7.0019054
952	12	48391416	48391416	G	T	exonic	COL2A1	NA	synonymous SNV	COL2A1:NM_033150:exon6:c.C297A:p.G99G,COL2A1:NM_001844:exon7:c.C504A:p.G168G	exonic	ENSG00000139219	NA	synonymous SNV	ENSG00000139219:ENST00000337299:exon6:c.C297A:p.G99G,ENSG00000139219:ENST00000380518:exon7:c.C504A:p.G168G	Score=670;Name=lod=704	NA	12q13.11	NA	Name=FOXA1_(C-20),p300,FOXA1_(SC-101058)	NA	NA	rs3737548	0.22	0.22	0.178	0.219249	0.2356	0.3036	0.2277	0.146	0.2086	0.22	0.27	0.24	0.13	0.2052	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.583903	NA	NA	0.22407	0.157286	NA	0.159	NA	7.0017966
952	19	40366374	40366374	G	C	exonic	FCGBP	NA	synonymous SNV	FCGBP:NM_003890:exon30:c.C13860G:p.P4620P	exonic	ENSG00000090920	NA	synonymous SNV	ENSG00000090920:ENST00000221347:exon30:c.C13860G:p.P4620P	NA	NA	19q13.2	NA	Name=E2F6_(H-50),CTCF,HA-E2F1	Name=15	NA	rs2053089	0.13	0.13	0.098	0.126198	0.2197	0.0466	0.2277	0.0363	0.1616	0.22	0.04	0.17	0.05	0.2047	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.925283	NA	NA	0.240521	0.080609	NA	0.181	NA	7.0017456
952	2	238277573	238277573	C	A	exonic	COL6A3	NA	synonymous SNV	COL6A3:NM_057166:exon7:c.G2712T:p.G904G,COL6A3:NM_057167:exon9:c.G3915T:p.G1305G,COL6A3:NM_004369:exon10:c.G4533T:p.G1511G	exonic	ENSG00000163359	NA	synonymous SNV	ENSG00000163359:ENST00000472056:exon7:c.G2712T:p.G904G,ENSG00000163359:ENST00000409809:exon8:c.G3915T:p.G1305G,ENSG00000163359:ENST00000346358:exon9:c.G3933T:p.G1311G,ENSG00000163359:ENST00000347401:exon9:c.G3930T:p.G1310G,ENSG00000163359:ENST00000353578:exon9:c.G3915T:p.G1305G,ENSG00000163359:ENST00000295550:exon10:c.G4533T:p.G1511G	NA	NA	2q37.3	Score=833;Name=V$NFKB_Q6	NA	NA	NA	rs2645774	0.25	0.25	0.218	0.265575	0.2177	0.256	0.3084	0.295	0.2546	0.2	0.26	0.3	0.27	0.2355	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.932662	NA	NA	0.212093	0.277803	NA	0.196	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000080941.2;CLNDSDB=.;CLNDSDBID=.	7.0013736
952	21	45656774	45656774	C	T	exonic	ICOSLG	NA	nonsynonymous SNV	ICOSLG:NM_015259:exon3:c.G382A:p.V128I	exonic	ENSG00000160223	NA	nonsynonymous SNV	ENSG00000160223:ENST00000344330:exon3:c.G382A:p.V128I,ENSG00000160223:ENST00000400379:exon3:c.G382A:p.V128I,ENSG00000160223:ENST00000407780:exon3:c.G382A:p.V128I	NA	NA	21q22.3	NA	NA	NA	NA	rs11558819	0.25	0.25	0.222	0.269169	0.2873	0.1438	0.3271	0.3427	0.2393	0.28	0.13	0.29	0.3	0.2706	0.32	0.36	T	0.694	P	0.253	B	0.586	N	1.000	P	1.87	L	1.66	T	-0.992	T	0.000	T	0.025	0.911	8.707	1.05	0.332	-0.355	4.037	0.911038	NA	0.07	0.274491	0.315462	ID=COSM149242;OCCURENCE=1(stomach)	0.29	NA	7.0009424
952	7	100608826	100608826	C	G	intergenic	ACHE,MUC12	dist=115285;dist=4078	NA	NA	exonic	ENSG00000169894	NA	synonymous SNV	ENSG00000169894:ENST00000422757:exon6:c.C675G:p.G225G,ENSG00000169894:ENST00000319509:exon7:c.C2205G:p.G735G	Score=417;Name=lod=66	NA	7q22.1	NA	Name=Rad21,CTCF,ETS1,E2F6_(H-50),GABP,HMGN3,E2F6,c-Myc,USF-1	Name=5	NA	rs73163794	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4999	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.192006	NA	NA	NA	NA	NA	0.181	NA	7.0001
952	1	27755156	27755156	G	A	intronic	WASF2	NA	NA	NA	intronic	ENSG00000158195	NA	NA	NA	NA	NA	1p36.11	NA	Name=CTCF,Rad21	Name=71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.335046	NA	NA	NA	NA	NA	NA	NA	7
952	1	55349512	55349512	C	T	intronic	DHCR24	NA	NA	NA	intronic	ENSG00000116133	NA	NA	NA	NA	NA	1p32.3	NA	Name=p300,FOXA2_(SC-6554)	Name=63	NA	NA	NA	NA	NA	0.000199681	NA	NA	NA	NA	0.001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.691526	NA	NA	NA	NA	NA	NA	NA	7
952	1	110026720	110026720	A	T	intronic	ATXN7L2	NA	NA	NA	intronic	ENSG00000162650	NA	NA	NA	NA	NA	1p13.3	NA	Name=IRF1,TBP,Oct-2,HEY1,NFKB,ELF1_(SC-631),STAT1,eGFP-JunD,Pol2-4H8,HDAC2_(SC-6296),TAF7_(SQ-8),YY1_(C-20),HA-E2F1,Egr-1,Pol2(phosphoS2),YY1,SP1,NRSF,Pol2,HMGN3,POU2F2,ETS1,TAF1	Name=106	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.640342	NA	NA	NA	NA	NA	NA	NA	7
952	1	154901497	154901497	T	C	intronic	PMVK	NA	NA	NA	intronic	ENSG00000163344	NA	NA	NA	Score=378;Name=lod=46	NA	1q21.3	Score=919;Name=V$NCX_01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.465362	NA	NA	NA	NA	NA	NA	NA	7
952	2	75061867	75061867	C	T	intronic	HK2	NA	NA	NA	intronic	ENSG00000159399	NA	NA	NA	NA	NA	2p12	NA	Name=ZBTB7A_(SC-34508),HA-E2F1,ETS1	Name=53	NA	NA	NA	NA	NA	0.000199681	NA	NA	0.0014	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.110815	NA	NA	NA	NA	NA	NA	NA	7
952	2	91800155	91800155	G	A	intergenic	NONE,LOC654342	dist=NONE;dist=24554	NA	NA	ncRNA_exonic	ENSG00000233991	NA	NA	NA	Score=376;Name=lod=45	NA	2p11.1	Score=833;Name=V$TST1_01	Name=SUZ12,BRF2	NA	NA	rs2537118	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.606248	NA	NA	NA	NA	NA	0.5	NA	7
952	2	91800380	91800380	T	C	intergenic	NONE,LOC654342	dist=NONE;dist=24329	NA	NA	ncRNA_exonic	ENSG00000233991	NA	NA	NA	Score=417;Name=lod=66	NA	2p11.1	NA	Name=Ini1,TCF12	Name=13	NA	rs6729464	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.572662	NA	NA	NA	NA	NA	0.471	NA	7
952	2	91800409	91800409	T	C	intergenic	NONE,LOC654342	dist=NONE;dist=24300	NA	NA	ncRNA_exonic	ENSG00000233991	NA	NA	NA	Score=381;Name=lod=47	NA	2p11.1	NA	Name=Ini1,TCF12	Name=13	NA	rs2430013	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.285567	NA	NA	NA	NA	NA	0.471	NA	7
952	2	91800445	91800445	G	A	intergenic	NONE,LOC654342	dist=NONE;dist=24264	NA	NA	ncRNA_exonic	ENSG00000233991	NA	NA	NA	Score=480;Name=lod=119	NA	2p11.1	NA	Name=Ini1,TCF12	Name=13	NA	rs2430014	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.429692	NA	NA	NA	NA	NA	0.5	NA	7
952	2	91800491	91800491	T	A	intergenic	NONE,LOC654342	dist=NONE;dist=24218	NA	NA	ncRNA_exonic	ENSG00000233991	NA	NA	NA	Score=480;Name=lod=119	NA	2p11.1	NA	Name=Ini1,TCF12	Name=13	NA	rs2429350	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.104479	NA	NA	NA	NA	NA	0.5	NA	7
952	2	91809385	91809385	C	G	intergenic	NONE,LOC654342	dist=NONE;dist=15324	NA	NA	ncRNA_exonic	ENSG00000233991	NA	NA	NA	Score=588;Name=lod=328	NA	2p11.1	NA	Name=TCF4	Name=54	NA	rs2310687	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.129277	2.129277	NA	NA	NA	NA	0.5	NA	7
952	2	91809404	91809404	G	C	intergenic	NONE,LOC654342	dist=NONE;dist=15305	NA	NA	ncRNA_exonic	ENSG00000233991	NA	NA	NA	Score=588;Name=lod=328	NA	2p11.1	NA	Name=FOXA2_(SC-6554),HDAC2_(SC-6296),TCF4	Name=54	NA	rs2215642	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.684403	1.684403	NA	NA	NA	NA	0.5	NA	7
952	2	133074683	133074683	T	C	intergenic	ANKRD30BL,GPR39	dist=59141;dist=99464	NA	NA	ncRNA_exonic	ENSG00000018607	NA	NA	NA	Score=369;Name=lod=42	NA	2q21.2	NA	Name=STAT3	Name=7	NA	rs7355726	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.306498	NA	NA	NA	NA	NA	0.457	NA	7
952	2	133074745	133074745	A	T	intergenic	ANKRD30BL,GPR39	dist=59203;dist=99402	NA	NA	ncRNA_exonic	ENSG00000018607	NA	NA	NA	Score=295;Name=lod=21	NA	2q21.2	NA	Name=STAT3	Name=7	NA	rs7355686	NA	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.278838	NA	NA	NA	NA	NA	0.5	NA	7
952	2	133074759	133074759	A	C	intergenic	ANKRD30BL,GPR39	dist=59217;dist=99388	NA	NA	ncRNA_exonic	ENSG00000018607	NA	NA	NA	Score=295;Name=lod=21	NA	2q21.2	NA	Name=STAT3	Name=7	NA	rs62169564	NA	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.359093	NA	NA	NA	NA	NA	0.5	NA	7
952	2	133076155	133076155	G	A	intergenic	ANKRD30BL,GPR39	dist=60613;dist=97992	NA	NA	ncRNA_exonic	ENSG00000018607	NA	NA	NA	Score=412;Name=lod=63	NA	2q21.2	NA	Name=SETDB1	Name=9	NA	rs2677622	NA	NA	NA	0.000399361	NA	NA	0.0014	0.0008	NA	NA	NA	NA	NA	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.511771	1.511771	NA	NA	NA	NA	0.478	NA	7
952	3	49170159	49170159	C	G	intronic	LAMB2	NA	NA	NA	intronic	ENSG00000172037	NA	NA	NA	NA	NA	3p21.31	NA	Name=AP-2alpha,Pol2,Ini1,AP-2gamma,CTCF	Name=133	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.227002	NA	NA	NA	NA	NA	NA	NA	7
952	5	41951615	41951615	C	T	intergenic	FBXO4,GHR	dist=9943;dist=472262	NA	NA	ncRNA_exonic	ENSG00000239694	NA	NA	NA	Score=770;Name=lod=1795	NA	5p13.1	NA	Name=MafK_(SC-477),MafF_(M8194),MafK_(ab50322)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.412876	NA	NA	NA	NA	NA	NA	NA	7
952	8	49832364	49832364	C	T	intronic	SNAI2	NA	NA	NA	intronic	ENSG00000019549	NA	NA	NA	NA	NA	8q11.21	NA	Name=CEBPB	Name=40	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.144068	NA	NA	NA	NA	NA	NA	NA	7
952	12	133353064	133353064	G	A	intronic	GOLGA3	NA	NA	NA	intronic	ENSG00000090615	NA	NA	NA	Score=487;Name=lod=127	NA	12q24.33	NA	Name=Pol2	Name=2	NA	rs147191860	0.25	0.25	0.185	NA	NA	NA	NA	NA	NA	0.35	0.23	0.23	0.13	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.800575	NA	NA	NA	NA	NA	NA	NA	7
952	14	106134635	106134635	C	G	intergenic	TMEM121,ELK2AP	dist=138096;dist=1279	NA	NA	ncRNA_exonic	ENSG00000253755	NA	NA	NA	NA	NA	14q32.33	Score=798;Name=V$PAX2_01	Name=Pol2	Name=5	NA	rs10144458	0.2	0.2	0.127	NA	NA	NA	NA	NA	NA	0.34	0.18	0.18	0.01	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.419981	NA	NA	NA	NA	NA	NA	NA	7
952	14	106881273	106881273	C	G	intergenic	LINC00226,LINC00221	dist=136307;dist=57182	NA	NA	ncRNA_exonic	ENSG00000253467	NA	NA	NA	Score=426;Name=lod=72	NA	14q32.33	NA	Name=EBF,EBF1_(C-8)	Name=2	NA	rs73368477	0.27	0.27	0.261	NA	NA	NA	NA	NA	NA	0.27	0.17	0.22	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.375729	NA	NA	NA	NA	NA	0.072	NA	7
952	15	45142526	45142526	A	G	intergenic	TRIM69,C15orf43	dist=82501;dist=106374	NA	NA	ncRNA_intronic	ENSG00000259479	NA	NA	NA	NA	NA	15q21.1	NA	Name=GATA-2	Name=41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.210141	NA	NA	NA	NA	NA	NA	NA	7
952	16	12975294	12975294	T	G	intergenic	CPPED1,SHISA9	dist=77550;dist=20183	NA	NA	ncRNA_exonic	ENSG00000241932	NA	NA	NA	Score=691;Name=lod=861	NA	16p13.12	NA	Name=CTCF	Name=8	NA	rs115804293	0.02	0.02	0.022	0.0235623	NA	NA	0.0101	0.084	NA	NA	NA	0.01	0.08	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.483832	NA	NA	NA	NA	NA	0.036	NA	7
952	17	62499477	62499477	A	G	intronic	DDX5	NA	NA	NA	intronic	ENSG00000108654	NA	NA	NA	NA	NA	17q23.3	NA	Name=CEBPB	Name=3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.412234	1.412234	NA	NA	NA	NA	NA	NA	7
952	18	21453312	21453312	A	G	intronic	LAMA3	NA	NA	NA	intronic	ENSG00000053747	NA	NA	NA	NA	NA	18q11.2	Score=706;Name=V$LUN1_01	Name=Pol2(b)	NA	NA	NA	NA	NA	NA	0.000199681	NA	NA	NA	NA	0.001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.321286	1.321286	NA	NA	NA	NA	NA	NA	7
952	19	12595365	12595365	C	T	intronic	ZNF709	NA	NA	NA	intronic	ENSG00000196826,ENSG00000242852,ENSG00000269755	NA	NA	NA	NA	NA	19p13.2	NA	Name=ZNF263	Name=24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.178775	NA	NA	NA	NA	NA	NA	NA	7
952	21	11181281	11181281	A	T	intergenic	BAGE,NONE	dist=82344;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000234643	NA	NA	NA	Score=752;Name=lod=1523	NA	21p11.1	NA	Name=ZNF274	Name=30	NA	rs1811010	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.445436	NA	NA	NA	NA	NA	0.471	NA	7
952	21	11181510	11181510	A	T	intergenic	BAGE,NONE	dist=82573;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000234643	NA	NA	NA	Score=752;Name=lod=1523	NA	21p11.1	NA	Name=ZNF274	Name=21	NA	rs1811013	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.469327	NA	NA	NA	NA	NA	0.348	NA	7
952	21	11181588	11181588	T	C	intergenic	BAGE,NONE	dist=82651;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000234643	NA	NA	NA	Score=752;Name=lod=1523	NA	21p11.1	NA	Name=ZNF274	Name=21	NA	rs915520	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.405146	NA	NA	NA	NA	ID=COSN166606;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.377	NA	7
952	12	6604430	6604430	A	G	intronic	NCAPD2	NA	NA	NA	intronic	ENSG00000010292	NA	NA	NA	NA	NA	12p13.31	NA	Name=CEBPB	Name=19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0000413	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.589338	NA	NA	NA	NA	NA	NA	NA	6.9999587
952	13	75876560	75876560	C	A	intronic	TBC1D4	NA	NA	NA	intronic	ENSG00000136111	NA	NA	NA	NA	NA	13q22.2	NA	Name=TCF4	Name=18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00009201	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.369159	2.369159	NA	NA	NA	NA	NA	NA	6.999908
952	7	100608778	100608778	T	C	intergenic	ACHE,MUC12	dist=115237;dist=4126	NA	NA	exonic	ENSG00000169894	NA	synonymous SNV	ENSG00000169894:ENST00000422757:exon6:c.T627C:p.P209P,ENSG00000169894:ENST00000319509:exon7:c.T2157C:p.P719P	Score=358;Name=lod=38	NA	7q22.1	NA	Name=USF-1,Rad21,CTCF,ETS1,GABP	Name=5	NA	rs73163792	NA	NA	0.017	0.000798722	NA	NA	0.0014	0.0023	NA	NA	NA	NA	NA	0.5001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.123111	NA	NA	NA	NA	NA	NA	NA	6.9999
952	4	108575989	108575989	G	A	exonic	PAPSS1	NA	synonymous SNV	PAPSS1:NM_005443:exon8:c.C963T:p.D321D	exonic	ENSG00000138801	NA	synonymous SNV	ENSG00000138801:ENST00000265174:exon8:c.C963T:p.D321D	NA	NA	4q25	NA	Name=GR,CTCF,KAP1	Name=23	NA	rs3733633	0.28	0.28	0.276	0.247604	0.2256	0.3512	0.2608	0.2466	0.1554	0.23	0.38	0.25	0.27	0.2298	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.697921	NA	NA	0.21186	0.2399	NA	0.297	NA	6.9994066
952	3	183774762	183774762	C	A	exonic	HTR3C	NA	nonsynonymous SNV	HTR3C:NM_130770:exon5:c.C489A:p.N163K	exonic	ENSG00000178084	NA	nonsynonymous SNV	ENSG00000178084:ENST00000318351:exon5:c.C489A:p.N163K	Score=519;Name=lod=171	NA	3q27.1	NA	NA	NA	NA	rs6766410	0.49	0.49	0.485	0.464657	0.4632	0.6508	0.5274	0.3933	0.3262	0.47	0.63	0.49	0.39	0.4454	0.63	0.63	T	0.044	B	0.026	B	0.034	N	0.999	P	0.515	N	-1.16	T	-0.925	T	0.000	T	0.07	1.975	12.56	0.975	0.296	-0.501	4.003	1.974677	1.974677	0.12	0.425698	0.416024	ID=COSM149531;OCCURENCE=1(stomach)	0.406	NA	6.9990354
952	17	7011110	7011110	G	C	intronic	ASGR2	NA	NA	NA	intronic	ENSG00000161944	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0011	NA	0.04	D	.	.	.	.	.	.	1.000	N	.	.	.	.	-1.014	T	0.057	T	.	-0.713	0.93	.	-2.418	-0.149	.	-0.712891	NA	NA	NA	NA	NA	NA	NA	6.9989
952	19	50314738	50314738	A	C	intronic	FUZ	NA	NA	NA	exonic	ENSG00000010361	NA	nonsynonymous SNV	ENSG00000010361:ENST00000528043:exon5:c.T248G:p.F83C	NA	NA	19q13.33	NA	Name=SIX5,Znf143_(16618-1-AP),CEBPB	Name=5	NA	rs12973635	0.03	0.03	0.028	0.0329473	0.0646	NA	0.0346	0.0008	0.0767	0.07	NA	0.04	0.0041	0.0482	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.098567	NA	NA	0.055116	0.009079	NA	0.029	NA	6.9987507
952	7	131195712	131195712	G	A	exonic	PODXL	NA	nonsynonymous SNV	PODXL:NM_001018111:exon2:c.C581T:p.S194L,PODXL:NM_005397:exon2:c.C581T:p.S194L	exonic	ENSG00000128567	NA	nonsynonymous SNV	ENSG00000128567:ENST00000322985:exon2:c.C581T:p.S194L,ENSG00000128567:ENST00000378555:exon2:c.C581T:p.S194L,ENSG00000128567:ENST00000446198:exon2:c.C581T:p.S194L,ENSG00000128567:ENST00000537928:exon2:c.C581T:p.S194L,ENSG00000128567:ENST00000541194:exon2:c.C587T:p.S196L	NA	NA	7q32.3	NA	NA	NA	NA	rs12670788	0.39	0.39	0.37	0.363419	0.4324	0.6518	0.3948	0.0363	0.4151	0.46	0.61	0.36	0.06	0.4282	0.61	0.42	T	0.394	B	0.042	B	0.000	N	1.000	P	0	N	2.81	T	-0.935	T	0.000	T	0.038	0.145	4.782	-2.05	-0.524	-0.157	1.192	0.145408	NA	0.3	0.47407	0.107127	NA	0.391	NA	6.9986634
952	19	9086145	9086145	G	C	exonic	MUC16	NA	nonsynonymous SNV	MUC16:NM_024690:exon1:c.C5670G:p.N1890K	exonic	ENSG00000181143	NA	nonsynonymous SNV	ENSG00000181143:ENST00000397910:exon1:c.C5670G:p.N1890K	NA	NA	19p13.2	NA	NA	NA	NA	rs45611441	0.1	0.1	0.08	0.10603	0.1252	0.1746	0.0821	0.0121	0.1595	0.12	0.16	0.1	0.01	0.1116	0.16	0	D	0.0	B	0.0	B	.	.	.	.	0	N	4.29	T	-0.932	T	0.000	T	0.02	-0.715	0.923	0.225	0.300	0.590	.	-0.715125	NA	0.62	0.098361	0.021293	NA	0.029	NA	6.9981724
952	12	123926213	123926213	C	G	intergenic	RILPL2,SNRNP35	dist=4949;dist=16438	NA	NA	ncRNA_exonic	ENSG00000270445	NA	NA	NA	Score=611;Name=lod=405	NA	12q24.31	NA	Name=TCF12,NFKB,p300,BATF,Max,Pol2,USF2	Name=9	NA	rs77242423	0.02	0.02	0.011	0.0219649	0.002	NA	0.0043	0.0696	0.0133	0.0026	NA	0.0028	0.08	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.102003	NA	NA	NA	NA	NA	0.014	NA	6.998
952	12	123926325	123926325	G	A	intergenic	RILPL2,SNRNP35	dist=5061;dist=16326	NA	NA	ncRNA_exonic	ENSG00000270445	NA	NA	NA	Score=483;Name=lod=123	NA	12q24.31	NA	Name=NFKB,p300,USF2,Pol2	Name=9	NA	rs142140516	0.0014	0.0014	0.001	0.00319489	0.002	NA	NA	0.0008	0.0133	0.0026	NA	NA	0.002	NA	0.0026	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.429061	NA	NA	NA	NA	NA	NA	NA	6.998
952	1	202124803	202124803	G	T	intronic	PTPN7	NA	NA	NA	intronic	ENSG00000143851	NA	NA	NA	NA	NA	1q32.1	NA	Name=GATA-1,RFX5_(N-494),Egr-1,Pol2-4H8,GATA-2	Name=66	NA	NA	NA	NA	NA	0.000798722	0.003	NA	NA	NA	0.001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.045211	NA	NA	NA	NA	NA	NA	NA	6.997
952	10	85984723	85984723	G	A	exonic	LRIT2	NA	synonymous SNV	LRIT2:NM_001017924:exon2:c.C258T:p.L86L	exonic	ENSG00000204033	NA	synonymous SNV	ENSG00000204033:ENST00000372113:exon2:c.C258T:p.L86L,ENSG00000204033:ENST00000538192:exon2:c.C258T:p.L86L	Score=502;Name=lod=146	NA	10q23.1	NA	Name=NRSF	NA	NA	rs11200928	0.22	0.22	0.188	0.208067	0.2346	0.3452	0.2925	0.0522	0.1902	0.22	0.31	0.28	0.07	0.2103	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.832993	NA	NA	0.225233	0.087608	NA	0.13	NA	6.9965336
952	5	147499891	147499891	G	T	exonic	SPINK5	NA	nonsynonymous SNV	SPINK5:NM_001127698:exon26:c.G2475T:p.E825D,SPINK5:NM_001127699:exon26:c.G2475T:p.E825D,SPINK5:NM_006846:exon26:c.G2475T:p.E825D	exonic	ENSG00000133710	NA	nonsynonymous SNV	ENSG00000133710:ENST00000256084:exon26:c.G2475T:p.E825D,ENSG00000133710:ENST00000359874:exon26:c.G2475T:p.E825D,ENSG00000133710:ENST00000398454:exon26:c.G2475T:p.E825D,ENSG00000133710:ENST00000508733:exon26:c.G2418T:p.E806D	NA	NA	5q32	NA	NA	NA	NA	rs2303070	0.14	0.14	0.131	0.174521	0.0855	0.2927	0.0648	0.1195	0.2965	0.09	0.3	0.07	0.09	0.1563	0.3	0.6	T	0.15	B	0.192	B	0.021	N	1.000	P	1.6	L	0.95	T	-0.995	T	0.000	T	0.116	2.046	12.8	0.564	0.081	-0.614	6.218	2.045734	2.045734	0.17	0.095046	0.106663	NA	0.094	NA	6.9964874
952	19	10692000	10692000	T	C	exonic	AP1M2	NA	synonymous SNV	AP1M2:NM_005498:exon6:c.A615G:p.S205S	exonic	ENSG00000129354	NA	synonymous SNV	ENSG00000129354:ENST00000591240:exon4:c.A378G:p.S126S,ENSG00000129354:ENST00000591676:exon5:c.A855G:p.S285S,ENSG00000129354:ENST00000250244:exon6:c.A615G:p.S205S,ENSG00000129354:ENST00000589684:exon6:c.A537G:p.S179S,ENSG00000129354:ENST00000590923:exon6:c.A615G:p.S205S	NA	NA	19p13.2	NA	Name=Pol2,E2F6,BRCA1_(C-1863),USF2,CTCF,GTF2F1_(RAP-74),STAT1,Max,NANOG_(SC-33759),ZNF263,USF-1,TBP,c-Myc	Name=3	NA	rs1045361	0.36	0.36	0.287	0.372604	0.1779	0.6627	0.5115	0.2557	0.3333	0.17	0.67	0.45	0.24	0.2926	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.060801	NA	NA	0.199881	0.225146	ID=COSM1390157;OCCURENCE=1(large_intestine)	0.239	NA	6.9962856
952	12	49522605	49522605	C	T	exonic	TUBA1B	NA	synonymous SNV	TUBA1B:NM_006082:exon4:c.G492A:p.K164K	exonic	ENSG00000123416	NA	synonymous SNV	ENSG00000123416:ENST00000336023:exon4:c.G492A:p.K164K	Score=737;Name=lod=1314	NA	12q13.12	NA	Name=CTCF_(SC-5916)	NA	NA	rs1057548	0.43	0.43	0.41	0.453275	0.327	0.6806	0.3415	0.3427	0.5777	0.32	0.68	0.36	0.35	0.3434	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.670713	1.670713	NA	NA	NA	NA	0.261	NA	6.9962666
952	4	3941939	3941939	G	A	intergenic	ADRA2C,FAM86EP	dist=171686;dist=1730	NA	NA	ncRNA_exonic	ENSG00000251271	NA	NA	NA	Score=607;Name=lod=391	NA	4p16.3	NA	NA	Name=34	NA	NA	NA	NA	NA	0.00139776	0.005	NA	0.0029	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.27985	NA	NA	NA	NA	NA	NA	NA	6.995
953	16	25255506	25255506	C	T	exonic	ZKSCAN2	NA	synonymous SNV	ZKSCAN2:NM_001012981:exon6:c.G1581A:p.K527K	exonic	ENSG00000155592	NA	synonymous SNV	ENSG00000155592:ENST00000328086:exon6:c.G1581A:p.K527K	Score=455;Name=lod=94	NA	16p12.1	Score=892;Name=V$NRF2_01	NA	NA	NA	rs11642611	0.3	0.3	0.302	0.333866	0.2107	0.3294	0.3026	0.4713	0.3016	0.21	0.31	0.25	0.47	0.2543	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.195727	NA	NA	0.207442	0.451297	NA	0.362	NA	6.9942246
953	11	5322737	5322737	A	G	exonic	OR51B4	NA	nonsynonymous SNV	OR51B4:NM_033179:exon1:c.T440C:p.M147T	exonic	ENSG00000183251	NA	nonsynonymous SNV	ENSG00000183251:ENST00000380224:exon1:c.T440C:p.M147T	NA	NA	11p15.4	NA	NA	NA	NA	rs10837771	0.47	0.47	0.415	0.442292	0.4473	0.747	0.4582	0.1195	0.5481	0.44	0.76	0.48	0.15	0.4562	0.76	0.4	T	0.016	B	0.015	B	0.517	N	1.000	P	0.835	L	1.28	T	-0.954	T	0.000	T	0.022	-0.855	0.539	2.63	0.386	0.397	8.322	-0.854514	NA	0.41	0.435769	0.165834	NA	0.348	NA	6.9940644
953	19	9346173	9346173	A	G	intergenic	OR7D4,OR7E24	dist=20626;dist=15547	NA	NA	ncRNA_exonic	ENSG00000188314	NA	NA	NA	Score=491;Name=lod=132	NA	19p13.2	NA	NA	NA	NA	rs3926919	0.01	0.01	NA	0.0279553	NA	NA	0.0058	0.1029	NA	NA	NA	0.01	0.06	0.006	0.06	1	T	.	.	.	.	.	.	.	.	.	.	.	.	-1.011	T	0.005	T	.	-1.914	0.008	1.54	0.464	6.325	8.605	-1.914406	NA	1	NA	NA	NA	0.029	NA	6.994
953	15	100269749	100269749	G	A	exonic	LYSMD4	NA	nonsynonymous SNV	LYSMD4:NM_152449:exon6:c.C473T:p.A158V	exonic	ENSG00000183060	NA	nonsynonymous SNV	ENSG00000183060:ENST00000409796:exon3:c.C470T:p.A157V,ENSG00000183060:ENST00000332728:exon4:c.C470T:p.A157V,ENSG00000183060:ENST00000545021:exon4:c.C92T:p.A31V,ENSG00000183060:ENST00000344791:exon6:c.C473T:p.A158V	NA	NA	15q26.3	NA	NA	NA	NA	rs8041089	0.16	0.16	0.135	0.167133	0.1163	0.2024	0.2392	0.1929	0.0971	0.12	0.18	0.19	0.18	0.1197	0.2	0.4	T	0.005	B	0.002	B	0.103	N	1.000	P	-0.6	N	2.21	T	-0.979	T	0.000	T	0.024	-1.533	0.016	1.6	0.283	-0.162	2.667	-1.533147	NA	0.53	0.103721	0.163187	ID=COSM1599991;OCCURENCE=1(central_nervous_system)	0.203	NA	6.9936124
953	16	25258035	25258035	A	G	exonic	ZKSCAN2	NA	synonymous SNV	ZKSCAN2:NM_001012981:exon5:c.T1482C:p.N494N	exonic	ENSG00000155592	NA	synonymous SNV	ENSG00000155592:ENST00000328086:exon5:c.T1482C:p.N494N	Score=468;Name=lod=106	NA	16p12.1	NA	Name=CEBPB	NA	NA	rs11649280	0.3	0.3	0.317	0.335863	0.2107	0.3294	0.3026	0.4758	0.3057	0.21	0.31	0.25	0.48	0.255	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.689244	NA	NA	0.207791	0.452435	NA	0.37	NA	6.9931756
953	7	80387766	80387766	C	T	exonic	SEMA3C	NA	synonymous SNV	SEMA3C:NM_006379:exon15:c.G1524A:p.Q508Q	exonic	ENSG00000075223	NA	synonymous SNV	ENSG00000075223:ENST00000265361:exon15:c.G1524A:p.Q508Q,ENSG00000075223:ENST00000419255:exon15:c.G1524A:p.Q508Q,ENSG00000075223:ENST00000544525:exon15:c.G1578A:p.Q526Q	Score=565;Name=lod=264	NA	7q21.11	Score=936;Name=V$IK2_01	NA	NA	NA	rs1058425	0.38	0.38	0.401	0.412141	0.1928	0.4286	0.3285	0.6498	0.3589	0.19	0.45	0.31	0.66	0.2866	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.890258	NA	NA	0.194419	0.601453	NA	0.399	NA	6.9928476
953	19	18377274	18377274	A	G	exonic	KIAA1683	NA	nonsynonymous SNV	KIAA1683:NM_001145304:exon3:c.T1076C:p.M359T,KIAA1683:NM_001145305:exon3:c.T938C:p.M313T,KIAA1683:NM_025249:exon3:c.T1076C:p.M359T	exonic	ENSG00000130518	NA	nonsynonymous SNV	ENSG00000130518:ENST00000392413:exon3:c.T1076C:p.M359T,ENSG00000130518:ENST00000600328:exon3:c.T1076C:p.M359T,ENSG00000130518:ENST00000600359:exon3:c.T938C:p.M313T	NA	NA	19p13.11	NA	NA	NA	NA	rs3746186	0.53	0.53	0.518	0.54373	0.4294	0.5496	0.5908	0.6929	0.4202	0.43	0.52	0.53	0.69	0.4862	0.69	0.37	T	0.0	B	0.0	B	0.210	N	1.000	P	0.205	N	3.86	T	-1.011	T	0.000	T	0.043	-0.138	3.325	-2.6	-0.751	-0.495	4.419	-0.137994	NA	0.3	0.426163	0.672492	NA	0.507	NA	6.9915704
953	17	4883818	4883818	C	G	exonic	CAMTA2	NA	nonsynonymous SNV	CAMTA2:NM_001171166:exon8:c.G805C:p.A269P,CAMTA2:NM_001171168:exon8:c.G796C:p.A266P,CAMTA2:NM_001171167:exon9:c.G868C:p.A290P,CAMTA2:NM_015099:exon9:c.G799C:p.A267P	exonic	ENSG00000108509	NA	nonsynonymous SNV	ENSG00000108509:ENST00000361571:exon8:c.G796C:p.A266P,ENSG00000108509:ENST00000381311:exon8:c.G805C:p.A269P,ENSG00000108509:ENST00000348066:exon9:c.G799C:p.A267P,ENSG00000108509:ENST00000358183:exon9:c.G799C:p.A267P,ENSG00000108509:ENST00000414043:exon9:c.G868C:p.A290P,ENSG00000108509:ENST00000572543:exon9:c.G814C:p.A272P	NA	NA	17p13.2	NA	NA	NA	NA	rs238234	0.75	0.75	0.738	0.71865	0.7843	0.499	0.8501	0.9486	0.4734	0.79	0.49	0.83	0.93	0.7511	0.94	0.38	T	0.0	B	0.0	B	0.141	N	1.000	P	-0.55	N	1.01	T	-1.043	T	0.000	T	0.054	-2.977	0.001	-2.14	-0.994	0.294	1.380	-2.976681	NA	0.04	0.806821	0.936527	NA	0.804	NA	6.9911124
953	1	24710405	24710405	A	G	exonic	STPG1	NA	nonsynonymous SNV	STPG1:NM_178122:exon3:c.T137C:p.M46T,STPG1:NM_001199012:exon4:c.T278C:p.M93T,STPG1:NM_001199013:exon4:c.T278C:p.M93T,STPG1:NM_001199014:exon5:c.T2C:p.M1T	exonic	ENSG00000001460	NA	nonsynonymous SNV	ENSG00000001460:ENST00000440416:exon2:c.T137C:p.M46T,ENSG00000001460:ENST00000003583:exon3:c.T137C:p.M46T,ENSG00000001460:ENST00000337248:exon4:c.T278C:p.M93T,ENSG00000001460:ENST00000374409:exon4:c.T278C:p.M93T	NA	NA	1p36.11	NA	NA	NA	NA	rs11538189	0.1	0.1	0.1	0.108826	0.1133	0.002	0.1052	0.2277	0.0562	0.13	NA	0.1	0.19	0.1066	0.22	0.64	T	0.0	B	0.0	B	0.374	N	1.000	P	-1.39	N	.	.	-0.965	T	0.000	T	0.295	-1.557	0.015	1.88	0.446	0.639	5.779	-1.557354	NA	0	0.123488	0.223786	NA	0.101	NA	6.9899454
953	5	70809169	70809169	A	G	exonic	BDP1	NA	nonsynonymous SNV	BDP1:NM_018429:exon19:c.A4405G:p.K1469E	exonic	ENSG00000145734	NA	nonsynonymous SNV	ENSG00000145734:ENST00000358731:exon19:c.A4405G:p.K1469E	NA	NA	5q13.2	NA	NA	NA	NA	rs1698063	0.4	0.4	0.395	0.399561	0.4583	0.3621	0.3055	0.3797	0.4714	0.46	0.38	0.33	0.37	0.4265	0.46	0.37	T	0.178	B	0.039	B	0.916	N	1.000	P	0.895	L	3.01	T	-0.922	T	0.000	T	0.033	0.786	8.146	2.1	0.193	0.269	4.048	0.78638	NA	0.6	0.458835	0.364238	NA	0.391	NA	6.9896984
953	11	118886117	118886117	C	T	exonic	CCDC84	NA	synonymous SNV	CCDC84:NM_198489:exon10:c.C906T:p.R302R	exonic	ENSG00000186166	NA	synonymous SNV	ENSG00000186166:ENST00000334418:exon10:c.C906T:p.R302R	NA	NA	11q23.3	NA	Name=Rad21,CTCF,YY1_(C-20),Pol2(phosphoS2),Pol2,Pol2(b),Pol2-4H8,YY1,CTCF_(SC-5916)	Name=21	NA	rs10111	0.21	0.21	0.21	0.251797	0.2286	0.0685	0.2334	0.3517	0.3425	0.22	0.05	0.24	0.36	0.2236	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.927626	NA	NA	0.225198	0.337727	NA	0.297	NA	6.9892686
953	6	44255459	44255459	G	A	exonic	TCTE1	NA	nonsynonymous SNV	TCTE1:NM_182539:exon2:c.C104T:p.P35L	exonic	ENSG00000146221	NA	nonsynonymous SNV	ENSG00000146221:ENST00000371505:exon2:c.C104T:p.P35L	NA	NA	6p21.1	NA	NA	NA	NA	rs324146	0.67	0.67	0.652	0.644569	0.7843	0.6002	0.8098	0.4773	0.6554	0.78	0.61	0.81	0.48	0.7517	0.81	0.04	D	0.0	B	0.001	B	0.841	N	1.000	P	1.95	M	2.11	T	-0.971	T	0.020	T	0.041	2.27	13.55	0.555	-0.014	-0.155	3.526	2.269869	2.269869	0.04	0.80814	0.548797	NA	0.681	NA	6.9891934
953	12	48920006	48920006	G	A	exonic	OR8S1	NA	nonsynonymous SNV	OR8S1:NM_001005203:exon1:c.G592A:p.A198T	exonic	ENSG00000197376	NA	nonsynonymous SNV	ENSG00000197376:ENST00000310194:exon1:c.G592A:p.A198T	NA	NA	12q13.11	NA	NA	NA	NA	rs12425518	0.32	0.32	0.286	0.346845	0.0755	0.5407	0.3991	0.4304	0.2761	0.08	0.53	0.36	0.39	0.2013	0.53	0.08	T	0.094	B	0.064	B	0.120	N	1.000	P	0.535	N	1.21	T	-0.912	T	0.000	T	0.084	1.154	9.699	-1.34	-0.135	-0.478	4.836	1.154072	NA	0.24	0.068605	0.376759	NA	0.239	NA	6.9879284
953	22	19750773	19750773	T	C	exonic	TBX1	NA	synonymous SNV	TBX1:NM_005992:exon4:c.T420C:p.F140F,TBX1:NM_080646:exon4:c.T420C:p.F140F,TBX1:NM_080647:exon4:c.T420C:p.F140F	exonic	ENSG00000184058	NA	synonymous SNV	ENSG00000184058:ENST00000329705:exon4:c.T420C:p.F140F,ENSG00000184058:ENST00000332710:exon4:c.T420C:p.F140F,ENSG00000184058:ENST00000359500:exon4:c.T420C:p.F140F	Score=601;Name=lod=371	NA	22q11.21	NA	Name=SUZ12	NA	NA	rs41298814	0.25	0.25	0.209	0.228235	0.2187	0.4583	0.2781	0.0227	0.2434	0.2	0.48	0.28	0.02	0.2352	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.895383	1.895383	NA	0.225581	0.044485	NA	0.312	NA	6.9871856
953	12	29642573	29642573	A	C	exonic	OVCH1	NA	nonsynonymous SNV	OVCH1:NM_183378:exon6:c.T682G:p.W228G	exonic	ENSG00000187950	NA	nonsynonymous SNV	ENSG00000187950:ENST00000318184:exon6:c.T682G:p.W228G	NA	NA	12p11.22	NA	NA	NA	NA	rs967181	0.43	0.43	0.428	0.422524	0.4692	0.5685	0.3012	0.3585	0.3967	0.46	0.56	0.28	0.35	0.4433	0.56	1	T	0.0	B	0.0	B	.	.	1.000	P	-2.905	N	-2.09	D	-0.962	T	0.000	T	0.073	-2.714	0	0.083	-0.301	0.817	1.020	-2.714028	NA	1	0.433802	0.350592	ID=COSM1361161;OCCURENCE=1(large_intestine)	0.442	NA	6.9870314
953	13	21562948	21562948	G	A	exonic	LATS2	NA	nonsynonymous SNV	LATS2:NM_014572:exon4:c.C971T:p.A324V	exonic	ENSG00000150457	NA	nonsynonymous SNV	ENSG00000150457:ENST00000382592:exon4:c.C971T:p.A324V,ENSG00000150457:ENST00000542899:exon4:c.C971T:p.A324V	NA	NA	13q12.11	NA	NA	NA	NA	rs558614	0.65	0.65	0.626	0.629593	0.7972	0.5387	0.6888	0.5129	0.6667	0.78	0.55	0.73	0.5	0.7345	0.82	0.34	T	0.216	B	0.028	B	0.912	N	1.000	P	-0.695	N	0.29	T	-0.968	T	0.000	T	0.094	0.517	6.803	2.72	0.682	6.231	12.146	0.517276	NA	0.35	0.81608	0.575549	ID=COSM1477132,COSM432208;OCCURENCE=1(breast)	0.58	NA	6.9855534
953	19	5696146	5696146	G	A	exonic	LONP1	NA	synonymous SNV	LONP1:NM_001276480:exon13:c.C1344T:p.T448T,LONP1:NM_004793:exon13:c.C1932T:p.T644T,LONP1:NM_001276479:exon14:c.C1740T:p.T580T	exonic	ENSG00000196365	NA	synonymous SNV	ENSG00000196365:ENST00000360614:exon13:c.C1932T:p.T644T,ENSG00000196365:ENST00000540670:exon13:c.C1344T:p.T448T,ENSG00000196365:ENST00000590729:exon13:c.C1542T:p.T514T,ENSG00000196365:ENST00000585374:exon14:c.C1590T:p.T530T,ENSG00000196365:ENST00000593119:exon14:c.C1740T:p.T580T	Score=422;Name=lod=69	NA	19p13.3	NA	Name=Pol2,Pol2-4H8	NA	NA	rs3745624	0.2	0.2	0.19	0.199081	0.2386	0.0913	0.2622	0.2655	0.135	0.22	0.1	0.24	0.26	0.2055	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.078798	NA	NA	0.237326	0.254653	NA	0.246	NA	6.9852406
954	7	140080087	140080087	C	G	exonic	SLC37A3	NA	nonsynonymous SNV	SLC37A3:NM_032295:exon3:c.G193C:p.V65L,SLC37A3:NM_207113:exon3:c.G193C:p.V65L	exonic	ENSG00000157800	NA	nonsynonymous SNV	ENSG00000157800:ENST00000326232:exon3:c.G193C:p.V65L,ENSG00000157800:ENST00000340308:exon3:c.G193C:p.V65L,ENSG00000157800:ENST00000429996:exon3:c.G193C:p.V65L,ENSG00000157800:ENST00000447932:exon3:c.G193C:p.V65L,ENSG00000157800:ENST00000462881:exon3:c.G193C:p.V65L,ENSG00000157800:ENST00000469193:exon3:c.G193C:p.V65L,ENSG00000157800:ENST00000477571:exon3:c.G193C:p.V65L	NA	NA	7q34	NA	NA	NA	NA	rs62490396	0.39	0.39	0.353	0.374401	0.4592	0.4474	0.3602	0.2103	0.4438	0.46	0.44	0.39	0.21	0.4325	0.46	0.43	T	0.013	B	0.009	B	0.064	N	1.000	P	-0.345	N	2.59	T	-0.951	T	0.000	T	0.161	0.821	8.305	1.88	1.078	0.407	4.757	0.820809	NA	0.41	0.458256	0.251702	ID=COSM150404;OCCURENCE=1(stomach)	0.428	NA	6.9833774
954	1	152079989	152079989	T	G	exonic	TCHH	NA	nonsynonymous SNV	TCHH:NM_007113:exon3:c.A5704C:p.K1902Q	exonic	ENSG00000159450	NA	nonsynonymous SNV	ENSG00000159450:ENST00000368804:exon2:c.A5704C:p.K1902Q	NA	NA	1q21.3	NA	NA	NA	NA	rs1131471	0.51	0.51	0.516	0.578075	0.4016	0.5992	0.6484	0.5136	0.7751	0.42	0.58	0.58	0.52	0.5093	0.58	0.44	T	0.0	B	0.0	B	.	.	1.000	P	0	N	3.43	T	-0.899	T	0.003	T	0.034	-1.253	0.05	1.34	-0.365	-1.102	5.435	-1.252895	NA	NA	0.439628	0.463868	NA	0.536	NA	6.9828054
954	9	19058921	19058921	G	A	exonic	HAUS6	NA	nonsynonymous SNV	HAUS6:NM_001270890:exon16:c.C1739T:p.A580V,HAUS6:NM_017645:exon16:c.C1844T:p.A615V	exonic	ENSG00000147874	NA	nonsynonymous SNV	ENSG00000147874:ENST00000415524:exon5:c.C392T:p.A131V,ENSG00000147874:ENST00000380496:exon13:c.C1436T:p.A479V,ENSG00000147874:ENST00000380502:exon16:c.C1844T:p.A615V	NA	NA	9p22.1	NA	NA	NA	NA	rs61744950	0.1	0.1	0.075	0.0964457	0.1004	0.0288	0.1527	0.1074	0.1074	0.11	0.02	0.17	0.12	0.1218	0.17	0.76	T	0.037	B	0.013	B	0.916	N	1.000	P	0.345	N	1.83	T	-1.045	T	0.000	T	0.171	-1.426	0.021	0.075	0.033	0.516	2.798	-1.425946	NA	0.25	0.128811	0.104176	NA	0.152	NA	6.9823224
954	4	26417136	26417136	T	C	exonic	RBPJ	NA	synonymous SNV	RBPJ:NM_015874:exon4:c.T195C:p.S65S,RBPJ:NM_203283:exon4:c.T189C:p.S63S,RBPJ:NM_005349:exon5:c.T234C:p.S78S,RBPJ:NM_203284:exon5:c.T192C:p.S64S	exonic	ENSG00000168214	NA	synonymous SNV	ENSG00000168214:ENST00000342320:exon4:c.T192C:p.S64S,ENSG00000168214:ENST00000345843:exon4:c.T189C:p.S63S,ENSG00000168214:ENST00000348160:exon4:c.T195C:p.S65S,ENSG00000168214:ENST00000361572:exon4:c.T234C:p.S78S,ENSG00000168214:ENST00000504907:exon4:c.T192C:p.S64S,ENSG00000168214:ENST00000507561:exon4:c.T129C:p.S43S,ENSG00000168214:ENST00000507574:exon4:c.T129C:p.S43S,ENSG00000168214:ENST00000510778:exon4:c.T303C:p.S101S,ENSG00000168214:ENST00000515573:exon4:c.T129C:p.S43S,ENSG00000168214:ENST00000342295:exon5:c.T234C:p.S78S,ENSG00000168214:ENST00000355476:exon5:c.T192C:p.S64S,ENSG00000168214:ENST00000506956:exon5:c.T192C:p.S64S,ENSG00000168214:ENST00000511546:exon5:c.T192C:p.S64S,ENSG00000168214:ENST00000512351:exon5:c.T192C:p.S64S,ENSG00000168214:ENST00000512671:exon5:c.T234C:p.S78S,ENSG00000168214:ENST00000514675:exon5:c.T192C:p.S64S,ENSG00000168214:ENST00000514730:exon5:c.T192C:p.S64S,ENSG00000168214:ENST00000504938:exon6:c.T129C:p.S43S	Score=599;Name=lod=363	NA	4p15.2	NA	Name=CTCF	NA	Score=96;Name=1718118_0_-_96	rs2270226	0.51	0.51	0.457	0.511781	0.5606	0.5308	0.683	0.3328	0.5624	0.56	0.54	0.65	0.3	0.562	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.439401	1.439401	NA	0.56186	0.371766	NA	0.5	NA	6.9822066
954	13	52603241	52603241	A	G	exonic	UTP14C	NA	nonsynonymous SNV	UTP14C:NM_021645:exon2:c.A301G:p.T101A	exonic	ENSG00000253797	NA	nonsynonymous SNV	ENSG00000253797:ENST00000521776:exon2:c.A301G:p.T101A	NA	NA	13q14.3	NA	NA	NA	NA	rs3742290	0.09	0.09	0.073	0.0800719	0.1203	0.0546	0.1239	0.0431	0.0838	0.12	0.06	0.14	0.05	0.112	0.14	0.86	T	0.004	B	0.015	B	0.910	N	1.000	P	-0.28	N	2.38	T	-0.942	T	0.000	T	0.036	-0.723	0.898	0.149	-0.059	0.029	5.636	-0.723189	NA	0.9	0.118953	0.063096	ID=COSM147692;OCCURENCE=1(stomach)	0.13	NA	6.9820804
954	5	167553880	167553880	C	T	exonic	TENM2	NA	synonymous SNV	TENM2:NM_001122679:exon12:c.C2331T:p.H777H	exonic	ENSG00000145934	NA	synonymous SNV	ENSG00000145934:ENST00000520394:exon9:c.C1635T:p.H545H,ENSG00000145934:ENST00000403607:exon10:c.C1830T:p.H610H,ENSG00000145934:ENST00000519204:exon11:c.C1968T:p.H656H,ENSG00000145934:ENST00000518659:exon12:c.C2331T:p.H777H,ENSG00000145934:ENST00000545108:exon12:c.C2331T:p.H777H	Score=790;Name=lod=2163	NA	5q34	Score=838;Name=V$USF_01	NA	NA	NA	rs10055910	0.17	0.17	0.156	0.155351	0.2336	0.003	0.1758	0.2572	0.0798	0.24	0.01	0.17	0.24	0.2179	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.031683	NA	NA	0.233549	0.21953	NA	0.196	NA	6.9816176
954	9	32541532	32541532	A	G	exonic	TOPORS	NA	synonymous SNV	TOPORS:NM_001195622:exon2:c.T2796C:p.D932D,TOPORS:NM_005802:exon3:c.T2991C:p.D997D	exonic	ENSG00000197579	NA	synonymous SNV	ENSG00000197579:ENST00000379858:exon2:c.T2796C:p.D932D,ENSG00000197579:ENST00000360538:exon3:c.T2991C:p.D997D	Score=463;Name=lod=102	NA	9p21.1	NA	NA	NA	NA	rs12348918	0.13	0.13	0.121	0.114217	0.2545	0.0079	0.1412	0.093	0.089	0.25	0.01	0.16	0.09	0.1852	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.475289	NA	NA	0.245465	0.125057	ID=COSM1132514;OCCURENCE=1(prostate)	0.109	CLINSIG=untested;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000081332.1;CLNDSDB=.;CLNDSDBID=.	6.9815016
954	19	3611972	3611972	G	A	exonic	CACTIN	NA	synonymous SNV	CACTIN:NM_001080543:exon10:c.C2226T:p.N742N,CACTIN:NM_021231:exon10:c.C2226T:p.N742N	exonic	ENSG00000105298	NA	synonymous SNV	ENSG00000105298:ENST00000591726:exon1:c.C303T:p.N101N,ENSG00000105298:ENST00000221899:exon10:c.C2022T:p.N674N,ENSG00000105298:ENST00000248420:exon10:c.C2226T:p.N742N,ENSG00000105298:ENST00000429344:exon10:c.C2226T:p.N742N,ENSG00000105298:ENST00000585942:exon10:c.C2226T:p.N742N	Score=628;Name=lod=475	NA	19p13.3	NA	NA	NA	NA	rs2158935	0.46	0.46	0.422	0.433107	0.5805	0.3313	0.6066	0.3033	0.4387	0.58	0.33	0.61	0.32	0.5342	0.61	0.73	T	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.938	T	0.000	T	.	2.367	13.87	-3.21	-0.334	-0.748	6.367	2.366515	2.366515	0.09	0.570554	0.359891	NA	0.514	NA	6.9814126
954	19	33075916	33075916	G	A	exonic	PDCD5	NA	synonymous SNV	PDCD5:NM_004708:exon3:c.G165A:p.R55R	exonic	ENSG00000105185	NA	nonsynonymous SNV	ENSG00000105185:ENST00000221784:exon3:c.G160A:p.V54I	Score=617;Name=lod=430	NA	19q13.11	NA	NA	NA	NA	rs34724018	0.04	0.04	0.052	0.0517173	0.002	NA	0.0202	0.1838	NA	0.0013	NA	0.02	0.18	0.0159	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.713736	1.713736	NA	0.001395	0.159101	NA	0.116	NA	6.980705
954	19	39789115	39789115	A	G	exonic	IFNL1	NA	nonsynonymous SNV	IFNL1:NM_172140:exon5:c.A562G:p.N188D	exonic	ENSG00000182393	NA	nonsynonymous SNV	ENSG00000182393:ENST00000333625:exon5:c.A562G:p.N188D	NA	NA	19q13.2	NA	NA	NA	NA	rs30461	0.23	0.23	0.262	0.251597	0.1123	0.0377	0.134	0.711	0.0777	0.11	0.04	0.16	0.68	0.1362	0.68	1	T	0.0	B	0.0	B	0.571	N	1.000	P	-2.275	N	3.03	T	-0.985	T	0.000	T	0.009	-1.262	0.047	1.19	-0.017	0.481	5.772	-1.261791	NA	1	0.106047	0.61961	NA	0.384	NA	6.9787864
954	10	99410790	99410790	T	C	exonic	PI4K2A	NA	synonymous SNV	PI4K2A:NM_018425:exon2:c.T528C:p.P176P	exonic	ENSG00000155252,ENSG00000249967	NA	synonymous SNV	ENSG00000155252:ENST00000370631:exon2:c.T528C:p.P176P,ENSG00000249967:ENST00000370649:exon3:c.T438C:p.P146P,ENSG00000155252:ENST00000555577:exon3:c.T438C:p.P146P	Score=741;Name=lod=1372	NA	10q24.2	Score=722;Name=V$NRSF_01	NA	NA	NA	rs7915721	0.33	0.33	0.326	0.342452	0.2028	0.3006	0.2666	0.6233	0.2035	0.19	0.3	0.27	0.62	0.2629	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.222784	NA	NA	0.222209	0.550386	ID=COSM1127960,COSM1127962;OCCURENCE=1(prostate)	0.348	NA	6.9787576
954	19	10742170	10742170	A	G	exonic	SLC44A2	NA	nonsynonymous SNV	SLC44A2:NM_001145056:exon7:c.A455G:p.Q152R,SLC44A2:NM_020428:exon7:c.A461G:p.Q154R	exonic	ENSG00000129353	NA	nonsynonymous SNV	ENSG00000129353:ENST00000588688:exon5:c.A302G:p.Q101R,ENSG00000129353:ENST00000590382:exon5:c.A296G:p.Q99R,ENSG00000129353:ENST00000335757:exon7:c.A461G:p.Q154R,ENSG00000129353:ENST00000407327:exon7:c.A455G:p.Q152R,ENSG00000129353:ENST00000586078:exon7:c.A461G:p.Q154R	NA	NA	19p13.2	NA	NA	NA	NA	rs2288904	0.79	0.79	0.784	0.817292	0.7644	0.7103	0.8516	0.9675	0.7546	0.77	0.65	0.81	0.95	0.8041	0.95	1	T	0.0	B	0.001	B	0.070	N	1.000	P	-1.15	N	2.98	T	-0.984	T	0.000	T	0.005	-0.551	1.506	4.87	1.320	0.874	9.472	-0.55085	NA	1	0.786628	0.933727	NA	0.79	NA	6.9782054
954	19	37441462	37441462	T	C	exonic	ZNF568	NA	synonymous SNV	ZNF568:NM_001204837:exon5:c.T1215C:p.T405T,ZNF568:NM_001204836:exon6:c.T1215C:p.T405T,ZNF568:NM_001204835:exon7:c.T1404C:p.T468T,ZNF568:NM_198539:exon7:c.T1407C:p.T469T	exonic	ENSG00000198453	NA	synonymous SNV	ENSG00000198453:ENST00000415168:exon5:c.T1215C:p.T405T,ENSG00000198453:ENST00000587857:exon6:c.T1215C:p.T405T,ENSG00000198453:ENST00000333987:exon7:c.T1407C:p.T469T	Score=492;Name=lod=133	NA	19q13.12	NA	Name=KAP1	Name=5	NA	rs546589	0.55	0.55	0.536	0.565895	0.5636	0.3105	0.5692	0.761	0.5654	0.57	0.32	0.58	0.75	0.5531	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.123833	NA	NA	0.571977	0.741943	NA	0.587	NA	6.9779896
954	7	142104144	142104144	T	C	intergenic	LOC730441,MTRNR2L6	dist=132076;dist=269987	NA	NA	exonic	ENSG00000211732	NA	synonymous SNV	ENSG00000211732:ENST00000390379:exon2:c.A321G:p.V107V	Score=376;Name=lod=45	NA	7q34	Score=852;Name=V$TAL1BETAE47_01	NA	Name=2	NA	rs361434	0.25	0.25	0.246	0.309505	0.1541	0.1121	0.2277	0.6437	0.2791	0.13	0.11	0.27	0.6	0.2068	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.766599	NA	NA	0.161161	0.520235	NA	0.37	NA	6.977939
954	3	47045739	47045739	C	G	exonic	NBEAL2	NA	synonymous SNV	NBEAL2:NM_015175:exon37:c.C6054G:p.P2018P	exonic	ENSG00000160796	NA	synonymous SNV	ENSG00000160796:ENST00000441027:exon1:c.C78G:p.P26P,ENSG00000160796:ENST00000292309:exon35:c.C5502G:p.P1834P,ENSG00000160796:ENST00000383740:exon37:c.C891G:p.P297P,ENSG00000160796:ENST00000450053:exon37:c.C6054G:p.P2018P	NA	NA	3p21.31	NA	NA	NA	NA	rs1079276	0.5	0.5	0.443	0.472045	0.5865	0.5387	0.5245	0.2383	0.5644	0.59	0.53	0.54	0.29	0.5368	0.59	0.13	T	.	.	.	.	0.555	N	1.000	P	.	.	0.34	T	-0.880	T	0.000	T	.	-1.43	0.021	3.54	1.242	0.120	12.200	-1.429707	NA	NA	0.565865	0.279288	NA	0.522	NA	6.9775016
954	19	38956839	38956839	C	T	exonic	RYR1	NA	synonymous SNV	RYR1:NM_000540:exon24:c.C2979T:p.N993N,RYR1:NM_001042723:exon24:c.C2979T:p.N993N	exonic	ENSG00000196218	NA	synonymous SNV	ENSG00000196218:ENST00000355481:exon24:c.C2979T:p.N993N,ENSG00000196218:ENST00000359596:exon24:c.C2979T:p.N993N,ENSG00000196218:ENST00000360985:exon24:c.C2979T:p.N993N	Score=548;Name=lod=226	NA	19q13.2	NA	NA	NA	NA	rs2228070	0.24	0.24	0.188	0.24401	0.2237	0.4266	0.2176	0.084	0.3119	0.23	0.41	0.22	0.1	0.241	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.363559	1.363559	NA	0.224988	0.102634	NA	0.225	CLINSIG=non-pathogenic|untested;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|not;CLNACC=RCV000079139.1|RCV000119604.1;CLNDSDB=.|.;CLNDSDBID=.|.	6.9769786
954	1	45444038	45444038	G	A	exonic	EIF2B3	NA	synonymous SNV	EIF2B3:NM_001166588:exon3:c.C243T:p.D81D,EIF2B3:NM_001261418:exon3:c.C243T:p.D81D,EIF2B3:NM_020365:exon3:c.C243T:p.D81D	exonic	ENSG00000070785	NA	synonymous SNV	ENSG00000070785:ENST00000360403:exon3:c.C243T:p.D81D,ENSG00000070785:ENST00000372182:exon3:c.C243T:p.D81D,ENSG00000070785:ENST00000372183:exon3:c.C243T:p.D81D	NA	NA	1p34.1	Score=843;Name=V$BRN2_01	NA	NA	NA	rs11556200	0.28	0.28	0.289	0.296526	0.1998	0.2758	0.4265	0.4032	0.181	0.2	0.25	0.35	0.39	0.2588	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.328558	NA	NA	0.231395	0.386972	NA	0.319	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000081999.3;CLNDSDB=.;CLNDSDBID=.	6.9766716
954	15	90768271	90768271	C	T	exonic	SEMA4B	NA	synonymous SNV	SEMA4B:NM_198925:exon10:c.C1266T:p.F422F,SEMA4B:NM_020210:exon11:c.C1266T:p.F422F	exonic	ENSG00000185033	NA	synonymous SNV	ENSG00000185033:ENST00000411539:exon10:c.C1266T:p.F422F,ENSG00000185033:ENST00000332496:exon11:c.C1266T:p.F422F,ENSG00000185033:ENST00000379122:exon11:c.C1251T:p.F417F	Score=549;Name=lod=228	NA	15q26.1	Score=783;Name=V$PAX6_01	NA	NA	NA	rs11547966	0.15	0.15	0.154	0.140974	0.2575	0.0556	0.1571	0.0787	0.182	0.28	0.04	0.16	0.08	0.1968	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.325112	1.325112	NA	0.235771	0.093721	NA	0.203	NA	6.9765956
954	1	22336305	22336305	C	T	exonic	CELA3A	NA	synonymous SNV	CELA3A:NM_005747:exon7:c.C750T:p.P250P	exonic	ENSG00000142789	NA	synonymous SNV	ENSG00000142789:ENST00000400271:exon2:c.C174T:p.P58P,ENSG00000142789:ENST00000290122:exon7:c.C750T:p.P250P	Score=403;Name=lod=58	NA	1p36.12	Score=840;Name=V$GR_Q6	NA	NA	NA	rs9187	0.3	0.3	0.23	0.286542	0.2207	0.4018	0.4107	0.2315	0.2219	0.24	0.37	0.38	0.25	0.2423	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.841505	NA	NA	0.227907	0.260554	NA	0.246	NA	6.9757596
954	9	71862987	71862987	G	A	exonic	TJP2	NA	synonymous SNV	TJP2:NM_001170415:exon19:c.G2739A:p.A913A,TJP2:NM_001170416:exon19:c.G2820A:p.A940A,TJP2:NM_001170630:exon19:c.G2727A:p.A909A,TJP2:NM_004817:exon19:c.G2727A:p.A909A,TJP2:NM_201629:exon19:c.G2727A:p.A909A,TJP2:NM_001170414:exon20:c.G2658A:p.A886A	exonic	ENSG00000119139	NA	synonymous SNV	ENSG00000119139:ENST00000265384:exon19:c.G2727A:p.A909A,ENSG00000119139:ENST00000348208:exon19:c.G2727A:p.A909A,ENSG00000119139:ENST00000377245:exon19:c.G2727A:p.A909A,ENSG00000119139:ENST00000535702:exon19:c.G2739A:p.A913A,ENSG00000119139:ENST00000539225:exon19:c.G2820A:p.A940A,ENSG00000119139:ENST00000453658:exon20:c.G2658A:p.A886A	Score=618;Name=lod=435	NA	9q21.11	NA	NA	NA	NA	rs2095876	0.29	0.29	0.226	0.284145	0.2197	0.4504	0.4539	0.1664	0.2178	0.22	0.44	0.43	0.13	0.2606	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.588402	1.588402	NA	0.210698	0.171357	NA	0.239	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000037082.1;CLNDSDB=.;CLNDSDBID=.	6.9756686
954	X	140993642	140993642	C	T	exonic	MAGEC1	NA	nonsynonymous SNV	MAGEC1:NM_005462:exon4:c.C452T:p.T151I	exonic	ENSG00000155495	NA	nonsynonymous SNV	ENSG00000155495:ENST00000285879:exon4:c.C452T:p.T151I	NA	NA	Xq27.2	NA	NA	NA	NA	rs176037	0.33	0.33	NA	NA	NA	NA	NA	NA	NA	0.49	0.21	0.34	0.22	0.4053	0.49	0.44	T	0.898	P	0.127	B	.	.	1.000	P	0	N	4.19	T	-1.031	T	0.000	T	0.064	-0.697	0.98	.	-0.000	0.109	5.832	-0.697338	NA	1	0.452735	0.259974	NA	0.123	NA	6.9752984
954	10	90524237	90524237	T	C	exonic	LIPN	NA	synonymous SNV	LIPN:NM_001102469:exon3:c.T297C:p.A99A	exonic	ENSG00000204020	NA	synonymous SNV	ENSG00000204020:ENST00000404459:exon3:c.T297C:p.A99A	Score=591;Name=lod=335	NA	10q23.31	NA	NA	Name=2	NA	rs430517	0.26	0.26	0.274	0.270767	0.2207	0.3502	0.2954	0.2428	0.2607	0.21	0.35	0.24	0.23	0.2462	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.264516	1.264516	NA	0.224734	0.267264	NA	0.174	NA	6.9750326
955	2	152432311	152432311	T	C	exonic	NEB	NA	synonymous SNV	NEB:NM_004543:exon79:c.A11772G:p.P3924P,NEB:NM_001164507:exon107:c.A16911G:p.P5637P,NEB:NM_001164508:exon107:c.A16911G:p.P5637P,NEB:NM_001271208:exon107:c.A16911G:p.P5637P	exonic	ENSG00000183091	NA	synonymous SNV	ENSG00000183091:ENST00000413693:exon7:c.A1101G:p.P367P,ENSG00000183091:ENST00000172853:exon79:c.A11808G:p.P3936P,ENSG00000183091:ENST00000409198:exon80:c.A11808G:p.P3936P,ENSG00000183091:ENST00000603639:exon105:c.A16911G:p.P5637P,ENSG00000183091:ENST00000604864:exon105:c.A16911G:p.P5637P,ENSG00000183091:ENST00000397345:exon107:c.A16911G:p.P5637P,ENSG00000183091:ENST00000427231:exon107:c.A16911G:p.P5637P	Score=612;Name=lod=408	NA	2q23.3	NA	NA	NA	NA	rs33988153	0.12	0.12	0.101	0.110224	0.2406	0.004	0.1282	0.0113	0.2065	0.25	0.01	0.17	0.01	0.1984	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.255017	NA	NA	0.253127	0.045831	NA	0.138	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000081112.3;CLNDSDB=.;CLNDSDBID=.	6.9745396
955	11	20067064	20067064	C	T	exonic	NAV2	NA	synonymous SNV	NAV2:NM_001111019:exon5:c.C1008T:p.D336D,NAV2:NM_001111018:exon14:c.C3558T:p.D1186D,NAV2:NM_145117:exon14:c.C3750T:p.D1250D,NAV2:NM_182964:exon14:c.C3750T:p.D1250D,NAV2:NM_001244963:exon15:c.C3819T:p.D1273D	exonic	ENSG00000166833	NA	synonymous SNV	ENSG00000166833:ENST00000311043:exon4:c.C1008T:p.D336D,ENSG00000166833:ENST00000525322:exon4:c.C1008T:p.D336D,ENSG00000166833:ENST00000533917:exon5:c.C1008T:p.D336D,ENSG00000166833:ENST00000349880:exon14:c.C3750T:p.D1250D,ENSG00000166833:ENST00000360655:exon14:c.C3558T:p.D1186D,ENSG00000166833:ENST00000396085:exon14:c.C3750T:p.D1250D,ENSG00000166833:ENST00000396087:exon15:c.C3819T:p.D1273D,ENSG00000166833:ENST00000527559:exon16:c.C3606T:p.D1202D,ENSG00000166833:ENST00000540292:exon16:c.C3612T:p.D1204D	Score=494;Name=lod=136	NA	11p15.1	NA	Name=GATA-2	Name=2	NA	rs7125647	0.68	0.68	0.658	0.66234	0.5378	0.8313	0.6628	0.5983	0.7025	0.56	0.87	0.67	0.63	0.6118	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.732012	NA	NA	0.543256	0.611893	NA	0.667	NA	6.9738106
955	15	48539587	48539587	T	C	exonic	SLC12A1	NA	synonymous SNV	SLC12A1:NM_000338:exon13:c.T1614C:p.Y538Y,SLC12A1:NM_001184832:exon13:c.T1614C:p.Y538Y	exonic	ENSG00000074803	NA	synonymous SNV	ENSG00000074803:ENST00000558405:exon12:c.T1614C:p.Y538Y,ENSG00000074803:ENST00000559641:exon12:c.T1053C:p.Y351Y,ENSG00000074803:ENST00000380993:exon13:c.T1614C:p.Y538Y,ENSG00000074803:ENST00000396577:exon13:c.T1614C:p.Y538Y	Score=647;Name=lod=567	NA	15q21.1	Score=862;Name=V$MZF1_02	NA	NA	NA	rs6493311	0.46	0.46	0.487	0.495607	0.2097	0.5883	0.2968	0.8366	0.3742	0.2	0.63	0.27	0.82	0.2967	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.567618	1.567618	NA	0.188271	0.712693	NA	0.486	NA	6.9719956
955	6	26285560	26285560	A	G	exonic	HIST1H4H	NA	synonymous SNV	HIST1H4H:NM_003543:exon1:c.T168C:p.R56R	exonic	ENSG00000158406	NA	synonymous SNV	ENSG00000158406:ENST00000289352:exon1:c.T168C:p.R56R,ENSG00000158406:ENST00000377727:exon1:c.T168C:p.R56R	Score=541;Name=lod=211	NA	6p22.2	NA	Name=CHD2_(N-1250),GATA2_(CG2-96),USF-1,PAX5-C20,Oct-2,CCNT2,c-Myc,eGFP-GATA2,ZEB1_(SC-25388),HEY1,NFKB,BCLAF1_(M33-P5B11),BCL11A,HA-E2F1,Brg1,Sin3Ak-20,E2F6,Pol2-4H8,GATA-2,GATA3_(SC-268),HDAC2_(SC-6296),ZNF263,Mxi1_(bHLH),Pol2,Egr-1,Pol2(phosphoS2),Ini1,POU2F2,ZBTB33,HMGN3,ETS1,E2F6_(H-50),TAF1,Pol2(b),GATA-1,JunD,SIRT6	Name=148	NA	rs2393592	0.62	0.62	0.582	0.61901	0.5547	0.8929	0.6412	0.3449	0.7577	0.56	0.91	0.64	0.37	0.6018	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.401952	NA	NA	0.538372	0.377213	NA	0.572	NA	6.9717946
955	9	123769200	123769200	C	T	exonic	C5	NA	nonsynonymous SNV	C5:NM_001735:exon19:c.G2404A:p.V802I	exonic	ENSG00000106804	NA	nonsynonymous SNV	ENSG00000106804:ENST00000223642:exon19:c.G2404A:p.V802I	Score=495;Name=lod=137	NA	9q33.2	NA	NA	NA	NA	rs17611	0.41	0.41	0.362	0.404752	0.4583	0.5685	0.5	0.0287	0.6217	0.47	0.58	0.5	0.04	0.4586	0.58	0.25	T	0.127	B	0.03	B	0.065	N	0.945	P	0.25	N	1.75	T	-0.957	T	0.000	T	0.046	1.399	10.61	1.06	0.277	0.100	5.629	1.399024	1.399024	0.33	0.445233	0.089877	NA	0.362	NA	6.9712004
955	15	101718097	101718097	C	G	exonic	CHSY1	NA	synonymous SNV	CHSY1:NM_014918:exon3:c.G1905C:p.V635V	exonic	ENSG00000131873	NA	synonymous SNV	ENSG00000131873:ENST00000254190:exon3:c.G1905C:p.V635V	Score=378;Name=lod=46	NA	15q26.3	Score=841;Name=V$FREAC2_01	NA	NA	NA	rs28364839	0.21	0.21	0.229	0.240815	0.2256	0.0347	0.1527	0.4644	0.229	0.22	0.04	0.19	0.42	0.2313	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.66726	NA	NA	0.238721	0.413981	NA	0.225	NA	6.9710456
955	1	11190646	11190646	G	A	exonic	MTOR	NA	synonymous SNV	MTOR:NM_004958:exon39:c.C5553T:p.S1851S	exonic	ENSG00000198793	NA	synonymous SNV	ENSG00000198793:ENST00000376838:exon1:c.C168T:p.S56S,ENSG00000198793:ENST00000361445:exon39:c.C5553T:p.S1851S	Score=526;Name=lod=183	NA	1p36.22	Score=822;Name=V$IRF1_01	NA	NA	NA	rs2275527	0.23	0.23	0.245	0.228634	0.2356	0.0794	0.1542	0.4486	0.1309	0.23	0.08	0.16	0.45	0.2215	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.501234	1.501234	NA	0.238605	0.437358	NA	0.232	NA	6.9709616
955	8	18729496	18729496	G	A	exonic	PSD3	NA	nonsynonymous SNV	PSD3:NM_015310:exon3:c.C878T:p.P293L	exonic	ENSG00000156011	NA	nonsynonymous SNV	ENSG00000156011:ENST00000523619:exon2:c.C683T:p.P228L,ENSG00000156011:ENST00000327040:exon3:c.C878T:p.P293L,ENSG00000156011:ENST00000440756:exon3:c.C878T:p.P293L	NA	NA	8p22	NA	NA	NA	NA	rs13263453	0.21	0.21	0.226	0.210863	0.1143	0.3065	0.1326	0.239	0.229	0.12	0.32	0.13	0.27	0.1459	0.32	0.21	T	0.0	B	0.0	B	0.639	N	1.000	P	0.695	N	2.92	T	-0.910	T	0.000	T	0.044	-0.132	3.355	1.96	0.075	0.642	3.943	-0.1318	NA	0.16	0.102746	0.212544	NA	0.152	NA	6.9703874
955	6	17633061	17633061	C	T	exonic	NUP153	NA	nonsynonymous SNV	NUP153:NM_005124:exon17:c.G2479A:p.A827T	exonic	ENSG00000124789	NA	nonsynonymous SNV	ENSG00000124789:ENST00000262077:exon17:c.G2479A:p.A827T,ENSG00000124789:ENST00000537253:exon18:c.G2572A:p.A858T	Score=393;Name=lod=53	Name=Obesity-related traits	6p22.3	NA	NA	NA	NA	rs2274136	0.82	0.82	0.82	0.814097	0.8002	0.879	0.804	0.7421	0.8661	0.8	0.91	0.8	0.77	0.7914	0.91	0.62	T	0.001	B	0.002	B	0.309	N	0.999	P	0.645	N	3.11	T	-0.897	T	0.004	T	0.02	1.519	11.03	1.06	-0.246	0.372	8.254	1.518913	1.518913	0.53	0.771395	0.726736	NA	0.804	NA	6.9703384
955	20	23860178	23860178	A	G	exonic	CST5	NA	nonsynonymous SNV	CST5:NM_001900:exon1:c.T136C:p.C46R	exonic	ENSG00000170367	NA	nonsynonymous SNV	ENSG00000170367:ENST00000304710:exon1:c.T136C:p.C46R	NA	NA	20p11.21	NA	NA	NA	NA	rs1799841	0.54	0.54	0.518	0.565096	0.4453	0.494	0.5476	0.8139	0.4376	0.44	0.47	0.53	0.79	0.483	0.79	0.87	T	0.0	B	0.0	B	0.702	N	1.000	P	-2.38	N	1.84	T	-0.970	T	0.000	T	0.027	-2.501	0.003	-0.399	-0.410	-1.217	0.831	-2.500876	NA	1	0.434884	0.749206	ID=COSM149153;OCCURENCE=1(stomach)	0.558	NA	6.9701494
955	19	731144	731144	A	G	exonic	PALM	NA	nonsynonymous SNV	PALM:NM_001040134:exon5:c.A319G:p.T107A,PALM:NM_002579:exon5:c.A319G:p.T107A	exonic	ENSG00000099864	NA	nonsynonymous SNV	ENSG00000099864:ENST00000264560:exon5:c.A319G:p.T107A,ENSG00000099864:ENST00000338448:exon5:c.A319G:p.T107A	NA	NA	19p13.3	NA	NA	NA	NA	rs1050457	0.52	0.52	0.511	0.546326	0.4394	0.5446	0.4942	0.7315	0.4448	0.43	0.53	0.51	0.66	0.4753	0.68	1	T	0.001	B	0.009	B	0.631	N	1.000	P	-0.205	N	2.44	T	-0.957	T	0.000	T	0.032	-1.069	0.174	-0.33	-0.100	-2.358	4.832	-1.06856	NA	0.78	0.449417	0.675534	NA	0.42	NA	6.9692164
955	11	62496519	62496519	T	C	exonic	TTC9C	NA	synonymous SNV	TTC9C:NM_173810:exon1:c.T199C:p.L67L	exonic	ENSG00000162222	NA	synonymous SNV	ENSG00000162222:ENST00000316461:exon1:c.T199C:p.L67L,ENSG00000162222:ENST00000294161:exon2:c.T199C:p.L67L,ENSG00000162222:ENST00000513247:exon2:c.T598C:p.L200L,ENSG00000162222:ENST00000530625:exon2:c.T199C:p.L67L,ENSG00000162222:ENST00000532583:exon2:c.T199C:p.L67L	Score=534;Name=lod=197	NA	11q12.3	NA	Name=ELF1_(SC-631)	NA	NA	rs584845	0.29	0.29	0.301	0.292732	0.2127	0.2391	0.2061	0.4947	0.2188	0.22	0.23	0.24	0.49	0.2404	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.660545	1.660545	NA	0.244708	0.455722	NA	0.362	NA	6.9688586
955	19	50463670	50463670	T	G	exonic	SIGLEC11	NA	nonsynonymous SNV	SIGLEC11:NM_001135163:exon3:c.A469C:p.K157Q,SIGLEC11:NM_052884:exon3:c.A469C:p.K157Q	exonic	ENSG00000161640	NA	nonsynonymous SNV	ENSG00000161640:ENST00000426971:exon3:c.A469C:p.K157Q,ENSG00000161640:ENST00000447370:exon3:c.A469C:p.K157Q	NA	NA	19q13.33	NA	NA	NA	NA	rs77553517	0.17	0.17	0.186	NA	NA	NA	NA	NA	NA	0.13	0.2	0.13	0.21	0.1898	0.22	0.52	T	0.0	B	0.0	B	0.069	N	1.000	P	-2.54	N	4.04	T	-0.964	T	0.000	T	0.021	-1.425	0.021	-0.577	-0.459	-0.174	1.928	-1.424972	NA	1	0.174971	0.219321	NA	0.101	NA	6.9685624
955	1	19584004	19584004	G	A	exonic	MRTO4	NA	synonymous SNV	MRTO4:NM_016183:exon5:c.G330A:p.E110E	exonic	ENSG00000053372	NA	synonymous SNV	ENSG00000053372:ENST00000330263:exon5:c.G330A:p.E110E	Score=463;Name=lod=102	NA	1p36.13	NA	NA	Name=13	NA	rs1042380	0.25	0.25	0.26	0.251398	0.2266	0.1012	0.183	0.4932	0.1534	0.24	0.1	0.2	0.47	0.2271	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.890398	NA	NA	0.244651	0.47458	NA	0.442	NA	6.9683156
955	1	152191709	152191709	C	G	exonic	HRNR	NA	nonsynonymous SNV	HRNR:NM_001009931:exon3:c.G2396C:p.S799T	exonic	ENSG00000197915	NA	nonsynonymous SNV	ENSG00000197915:ENST00000368801:exon3:c.G2396C:p.S799T	NA	NA	1q21.3	NA	NA	NA	NA	rs6662450	0.59	0.59	0.608	0.531749	0.829	0.3274	0.5519	0.4682	0.5082	0.82	0.36	0.63	0.47	0.7062	0.83	0.67	T	0.334	B	0.014	B	.	.	1.000	P	0.345	N	3.47	T	-0.921	T	0.003	T	0.033	0.15	4.809	2.17	1.209	0.562	7.835	0.150427	NA	0	0.830233	0.523604	ID=COSM1180639;OCCURENCE=1(upper_aerodigestive_tract)	0.688	NA	6.9679004
955	22	23974200	23974200	A	G	exonic	C22orf43	NA	nonsynonymous SNV	C22orf43:NM_016449:exon1:c.T11C:p.I4T	exonic	ENSG00000189269	NA	nonsynonymous SNV	ENSG00000189269:ENST00000317749:exon1:c.T11C:p.I4T	NA	NA	22q11.23	NA	NA	NA	NA	rs3827318	0.16	0.16	0.14	0.164137	0.1133	0.2371	0.1383	0.1785	0.1401	0.13	0.22	0.13	0.16	0.1392	0.22	0.74	T	0.89	P	0.702	P	.	.	1.000	P	-0.145	N	1.55	T	-1.079	T	0.000	T	0.128	-0.305	2.546	0.14	0.157	0.238	.	-0.305118	NA	0.44	0.113278	0.172182	NA	0.188	NA	6.9675554
955	5	57750350	57750350	C	G	UTR3	PLK2	NM_001252226:c.*60G>C,NM_006622:c.*60G>C	NA	NA	UTR3	ENSG00000145632	ENST00000274289:c.*60G>C	NA	NA	Score=329;Name=lod=29	NA	5q11.2	Score=1000;Name=V$STAT3_02	NA	Name=20	NA	rs15009	0.44	0.44	0.433	0.446086	0.3668	0.5982	0.4683	0.3283	0.5143	0.36	0.64	0.42	0.32	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.695513	1.695513	NA	NA	NA	NA	0.464	NA	6.9665334
955	9	18504916	18504916	T	A	exonic	ADAMTSL1	NA	synonymous SNV	ADAMTSL1:NM_001040272:exon2:c.T153A:p.G51G,ADAMTSL1:NM_052866:exon2:c.T153A:p.G51G	exonic	ENSG00000178031	NA	synonymous SNV	ENSG00000178031:ENST00000276935:exon2:c.T153A:p.G51G,ENSG00000178031:ENST00000327883:exon2:c.T153A:p.G51G,ENSG00000178031:ENST00000380548:exon2:c.T153A:p.G51G,ENSG00000178031:ENST00000380566:exon2:c.T153A:p.G51G,ENSG00000178031:ENST00000380570:exon2:c.T153A:p.G51G,ENSG00000178031:ENST00000431052:exon2:c.T153A:p.G51G	Score=467;Name=lod=105	NA	9p22.1	NA	Name=SP1	Name=3	NA	rs2277160	0.57	0.57	0.564	0.570887	0.5755	0.4444	0.5418	0.6725	0.5798	0.59	0.44	0.58	0.67	0.5617	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.72149	1.72149	NA	0.563256	0.652746	NA	0.529	NA	6.9662106
955	6	17831531	17831531	C	T	intronic	KIF13A	NA	NA	NA	intronic	ENSG00000137177	NA	NA	NA	Score=278;Name=lod=18	NA	6p22.3	NA	Name=c-Fos,GATA-2,c-Jun,CTCF	Name=95	NA	rs77510670	0.02	0.02	0.019	0.00958466	0.0338	NA	0.013	NA	0.0051	0.04	NA	0.02	NA	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.74042	NA	NA	NA	NA	NA	0.022	NA	6.9662
955	15	89195264	89195264	A	G	intronic	ISG20	NA	NA	NA	intronic	ENSG00000172183	NA	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs7180509	0.1	0.1	0.104	0.111222	0.0338	0.0397	0.0418	0.2837	0.0808	0.03	0.04	0.04	0.33	NA	0.33	0.01	D	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.985	T	0.000	T	.	1.182	9.808	-2.91	-0.678	-0.425	1.008	1.182252	NA	NA	NA	NA	NA	0.13	NA	6.9662
955	18	61390361	61390361	T	C	exonic	SERPINB11	NA	unknown	UNKNOWN	exonic	ENSG00000206072	NA	nonsynonymous SNV	ENSG00000206072:ENST00000538847:exon3:c.T301C:p.S101P,ENSG00000206072:ENST00000536691:exon7:c.T382C:p.S128P	NA	NA	18q21.33	NA	NA	NA	NA	rs1395267	0.78	0.78	0.775	0.754792	0.7406	0.8819	0.732	0.7163	0.7065	0.76	0.88	0.75	0.73	0.7356	0.88	0.13	T	0.958	D	0.563	P	0.002	N	1.000	P	.	.	2.67	T	-0.989	T	0.000	T	0.153	0.744	7.946	2.28	0.794	0.642	7.360	0.743792	NA	NA	0.724558	0.727713	NA	0.855	NA	6.9659087
955	12	52652210	52652210	T	A	intergenic	KRT7,KRT81	dist=9501;dist=27487	NA	NA	ncRNA_exonic	ENSG00000135477	NA	NA	NA	Score=363;Name=lod=40	NA	12q13.13	NA	Name=CTCF	Name=53	NA	rs117031005	0.02	0.02	0.024	0.0115815	0.0348	0.001	0.0245	0.0023	0.002	0.04	NA	0.03	0.0041	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.784098	2.784098	0.45	NA	NA	NA	0.014	NA	6.9652
956	2	85625222	85625222	T	G	exonic	CAPG	NA	synonymous SNV	CAPG:NM_001256139:exon8:c.A813C:p.P271P,CAPG:NM_001256140:exon8:c.A768C:p.P256P,CAPG:NM_001747:exon8:c.A813C:p.P271P	exonic	ENSG00000042493	NA	synonymous SNV	ENSG00000042493:ENST00000453973:exon2:c.A78C:p.P26P,ENSG00000042493:ENST00000263867:exon8:c.A813C:p.P271P,ENSG00000042493:ENST00000409670:exon8:c.A813C:p.P271P,ENSG00000042493:ENST00000409724:exon8:c.A813C:p.P271P,ENSG00000042493:ENST00000409921:exon8:c.A768C:p.P256P	Score=383;Name=lod=48	NA	2p11.2	NA	Name=GATA-2,GATA3_(SC-268),ZNF263	NA	NA	rs6885	0.24	0.24	0.239	0.251597	0.2336	0.121	0.147	0.4175	0.2546	0.24	0.13	0.15	0.44	0.2239	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.799447	NA	NA	0.244419	0.373128	NA	0.297	NA	6.9647476
956	21	46320313	46320313	C	T	exonic	ITGB2	NA	synonymous SNV	ITGB2:NM_000211:exon7:c.G819A:p.G273G,ITGB2:NM_001127491:exon7:c.G819A:p.G273G	exonic	ENSG00000160255	NA	synonymous SNV	ENSG00000160255:ENST00000320216:exon6:c.G792A:p.G264G,ENSG00000160255:ENST00000397852:exon6:c.G819A:p.G273G,ENSG00000160255:ENST00000397854:exon6:c.G648A:p.G216G,ENSG00000160255:ENST00000302347:exon7:c.G819A:p.G273G,ENSG00000160255:ENST00000355153:exon7:c.G819A:p.G273G,ENSG00000160255:ENST00000397857:exon7:c.G819A:p.G273G,ENSG00000160255:ENST00000397850:exon8:c.G819A:p.G273G	Score=409;Name=lod=61	NA	21q22.3	NA	NA	NA	NA	rs2230528	0.19	0.19	0.145	0.223043	0.2177	0.1607	0.2709	0.1815	0.3149	0.21	0.13	0.29	0.15	0.2428	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.03344	NA	NA	0.241512	0.166818	NA	0.217	CLINSIG=untested;CLNDBN=Leukocyte_adhesion_deficiency_type_1;CLNREVSTAT=not;CLNACC=RCV000087125.1;CLNDSDB=MedGen:OMIM:Orphanet:Orphanet;CLNDSDBID=C1861766:116920:ORPHA2968:ORPHA99842	6.9646546
956	1	9416151	9416151	G	A	exonic	SPSB1	NA	synonymous SNV	SPSB1:NM_025106:exon2:c.G201A:p.V67V	exonic	ENSG00000171621	NA	synonymous SNV	ENSG00000171621:ENST00000377399:exon1:c.G201A:p.V67V,ENSG00000171621:ENST00000328089:exon2:c.G201A:p.V67V,ENSG00000171621:ENST00000357898:exon2:c.G201A:p.V67V,ENSG00000171621:ENST00000450402:exon2:c.G201A:p.V67V	Score=472;Name=lod=111	NA	1p36.22	Score=774;Name=V$PAX2_01	NA	NA	NA	rs9435243	0.26	0.26	0.218	0.259385	0.1998	0.2748	0.3401	0.2368	0.2781	0.2	0.29	0.32	0.26	0.2723	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.092005	NA	NA	0.232326	0.239673	NA	0.174	NA	6.9622406
956	19	2939401	2939401	C	G	exonic	ZNF77	NA	nonsynonymous SNV	ZNF77:NM_021217:exon2:c.G8C:p.C3S	exonic	ENSG00000175691	NA	nonsynonymous SNV	ENSG00000175691:ENST00000314531:exon2:c.G8C:p.C3S	NA	NA	19p13.3	NA	NA	NA	NA	rs12610412	0.19	0.19	0.159	0.176118	0.1153	0.372	0.2493	0.1021	0.0849	0.11	0.4	0.19	0.08	0.1358	0.4	1	T	0.0	B	0.0	B	.	.	1.000	P	-2.41	N	5.83	T	-0.975	T	0.000	T	0.01	-3.313	0.001	1.42	0.388	-0.422	3.276	-3.313343	NA	1	0.120814	0.108715	NA	0.246	NA	6.9614194
956	5	150400254	150400254	G	C	exonic	GPX3	NA	unknown	UNKNOWN	exonic	ENSG00000211445	NA	unknown	UNKNOWN	Score=425;Name=lod=71	NA	5q33.1	NA	Name=Pol2,Pol2-4H8,TAF1,TBP,HEY1	NA	NA	rs8177413	0.03	0.03	0.034	0.0465256	0.007	0.0228	0.0245	0.0726	0.092	0.01	0.03	0.03	0.06	0.0249	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.367606	1.367606	NA	0.006719	0.054536	NA	0.022	NA	6.961381
956	19	2939396	2939396	T	C	exonic	ZNF77	NA	nonsynonymous SNV	ZNF77:NM_021217:exon2:c.A13G:p.I5V	exonic	ENSG00000175691	NA	nonsynonymous SNV	ENSG00000175691:ENST00000314531:exon2:c.A13G:p.I5V	NA	NA	19p13.3	NA	NA	NA	NA	rs12609268	0.19	0.19	0.159	0.176118	0.1153	0.372	0.2493	0.1021	0.0849	0.11	0.4	0.19	0.08	0.1359	0.4	0.26	T	0.0	B	0.0	B	.	.	1.000	P	-1.66	N	4.72	T	-1.006	T	0.000	T	0.044	-2.37	0.004	1.42	0.389	0.257	4.274	-2.370024	NA	1	0.120814	0.108942	NA	0.246	NA	6.9613194
956	1	9307033	9307033	G	A	exonic	H6PD	NA	synonymous SNV	H6PD:NM_004285:exon3:c.G636A:p.A212A	exonic	ENSG00000049239	NA	synonymous SNV	ENSG00000049239:ENST00000377403:exon3:c.G636A:p.A212A,ENSG00000049239:ENST00000602477:exon3:c.G669A:p.A223A	Score=525;Name=lod=182	NA	1p36.22	Score=802;Name=V$HEN1_01	NA	NA	NA	rs7524046	0.25	0.25	0.232	0.222644	0.2445	0.4038	0.2622	0.1074	0.1411	0.24	0.43	0.21	0.11	0.2235	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.471782	NA	NA	0.238837	0.15842	NA	0.217	NA	6.9598296
956	12	88380094	88380094	T	C	exonic	C12orf50	NA	nonsynonymous SNV	C12orf50:NM_152589:exon10:c.A917G:p.Q306R	exonic	ENSG00000165805	NA	nonsynonymous SNV	ENSG00000165805:ENST00000550553:exon9:c.A800G:p.Q267R,ENSG00000165805:ENST00000298699:exon10:c.A917G:p.Q306R	NA	NA	12q21.32	NA	NA	NA	NA	rs10777084	0.24	0.24	0.269	0.303115	0.0994	0.0565	0.1383	0.8147	0.1922	0.09	0.04	0.13	0.78	0.1577	0.78	0.8	T	0.0	B	0.001	B	0.126	N	1.000	P	-0.77	N	1.65	T	-1.014	T	0.000	T	0.035	-3.085	0.001	-0.245	-0.326	-0.089	6.581	-3.085134	NA	1	0.117004	0.690422	NA	0.312	NA	6.9592294
956	3	195477786	195477786	C	T	exonic	MUC4	NA	nonsynonymous SNV	MUC4:NM_138297:exon21:c.G2984A:p.G995E,MUC4:NM_004532:exon22:c.G3137A:p.G1046E,MUC4:NM_018406:exon23:c.G15845A:p.G5282E	exonic	ENSG00000145113	NA	nonsynonymous SNV	ENSG00000145113:ENST00000349607:exon21:c.G2984A:p.G995E,ENSG00000145113:ENST00000346145:exon22:c.G3137A:p.G1046E,ENSG00000145113:ENST00000475231:exon22:c.G15689A:p.G5230E,ENSG00000145113:ENST00000463781:exon23:c.G15845A:p.G5282E	NA	NA	3q29	NA	NA	NA	NA	rs6808605	0.07	0.07	0.077	0.0603035	0.1451	0.001	0.0764	0.0348	0.0573	0.13	NA	0.09	0.05	0.096	0.13	0.45	T	0.306	B	0.072	B	0.015	N	1.000	P	0	N	1.64	T	-1.008	T	0.000	T	0.154	1.941	12.45	1.33	0.208	0.160	7.681	1.940731	1.940731	0.03	0.133023	0.039265	NA	0.13	NA	6.9592104
956	1	152192631	152192631	C	T	exonic	HRNR	NA	nonsynonymous SNV	HRNR:NM_001009931:exon3:c.G1474A:p.G492R	exonic	ENSG00000197915	NA	nonsynonymous SNV	ENSG00000197915:ENST00000368801:exon3:c.G1474A:p.G492R	NA	NA	1q21.3	NA	NA	NA	NA	rs6587647	0.61	0.61	0.606	0.559904	0.83	0.38	0.5576	0.5287	0.5112	0.82	0.37	0.63	0.53	0.7142	0.83	0.25	T	0.105	B	0.007	B	.	.	1.000	P	0.805	L	3.37	T	-0.916	T	0.004	T	0.061	0.511	6.771	-3.36	-0.512	-3.733	8.767	0.511211	NA	0.06	0.831047	0.588743	NA	0.565	NA	6.9580864
956	19	33467576	33467576	G	A	exonic	C19orf40	NA	synonymous SNV	C19orf40:NM_152266:exon5:c.G636A:p.T212T	exonic	ENSG00000131944	NA	synonymous SNV	ENSG00000131944:ENST00000590179:exon3:c.G351A:p.T117T,ENSG00000131944:ENST00000589646:exon4:c.G351A:p.T117T,ENSG00000131944:ENST00000588258:exon5:c.G636A:p.T212T,ENSG00000131944:ENST00000590281:exon5:c.G636A:p.T212T	Score=391;Name=lod=52	NA	19q13.11	NA	NA	Name=2	NA	rs7258185	0.24	0.24	0.214	0.26877	0.2157	0.1647	0.4366	0.3094	0.2566	0.22	0.13	0.36	0.3	0.2636	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.663447	NA	NA	0.230116	0.30345	NA	0.268	NA	6.9572506
956	11	406483	406483	T	C	exonic	SIGIRR	NA	nonsynonymous SNV	SIGIRR:NM_001135053:exon9:c.A935G:p.Q312R,SIGIRR:NM_001135054:exon9:c.A935G:p.Q312R,SIGIRR:NM_021805:exon9:c.A935G:p.Q312R	exonic	ENSG00000185187	NA	nonsynonymous SNV	ENSG00000185187:ENST00000531205:exon8:c.A935G:p.Q312R,ENSG00000185187:ENST00000332725:exon9:c.A935G:p.Q312R,ENSG00000185187:ENST00000382520:exon9:c.A935G:p.Q312R,ENSG00000185187:ENST00000397632:exon9:c.A935G:p.Q312R,ENSG00000185187:ENST00000431843:exon9:c.A935G:p.Q312R	NA	NA	11p15.5	NA	NA	NA	NA	rs3210908	0.9	0.9	0.864	0.927117	0.7793	0.998	0.8977	0.9834	0.9509	0.78	1	0.88	0.98	0.8362	1	0.88	T	0.0	B	0.001	B	0.351	N	1.000	P	0.805	L	4.14	T	-1.029	T	0.000	T	0.152	-1.499	0.017	-2.77	-1.273	-0.395	7.634	-1.498761	NA	0.49	0.761816	0.946997	NA	0.877	NA	6.9560174
956	17	10304261	10304261	G	A	exonic	MYH8	NA	synonymous SNV	MYH8:NM_002472:exon26:c.C3270T:p.I1090I	exonic	ENSG00000133020	NA	synonymous SNV	ENSG00000133020:ENST00000403437:exon26:c.C3270T:p.I1090I	Score=645;Name=lod=557	NA	17p13.1	Score=806;Name=V$IRF7_01	NA	NA	NA	rs3744552	0.49	0.49	0.488	0.473642	0.6272	0.124	0.4841	0.7292	0.3231	0.62	0.12	0.49	0.73	0.5025	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.168423	NA	NA	0.581047	0.694961	NA	0.442	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117688.1;CLNDSDB=.;CLNDSDBID=.	6.9559196
957	2	207824384	207824384	T	G	exonic	CPO	NA	nonsynonymous SNV	CPO:NM_173077:exon5:c.T402G:p.S134R	exonic	ENSG00000144410	NA	nonsynonymous SNV	ENSG00000144410:ENST00000272852:exon5:c.T402G:p.S134R	Score=243;Name=lod=13	NA	2q33.3	NA	NA	NA	NA	rs11903403	0.43	0.43	0.456	0.434105	0.4592	0.4058	0.2752	0.5454	0.3998	0.45	0.39	0.31	0.51	0.4412	0.52	0.6	T	0.0	B	0.0	B	0.000	N	1.000	P	-0.325	N	2.93	T	-0.963	T	0.000	T	0.054	-0.77	0.758	1.12	0.051	0.471	2.624	-0.77036	NA	0.57	0.478488	0.523377	NA	0.522	NA	6.9544454
957	1	201981218	201981218	C	G	exonic	ELF3	NA	synonymous SNV	ELF3:NM_001114309:exon3:c.C297G:p.G99G,ELF3:NM_004433:exon3:c.C297G:p.G99G	exonic	ENSG00000163435	NA	synonymous SNV	ENSG00000163435:ENST00000359651:exon2:c.C297G:p.G99G,ENSG00000163435:ENST00000367283:exon3:c.C297G:p.G99G,ENSG00000163435:ENST00000367284:exon3:c.C297G:p.G99G,ENSG00000163435:ENST00000446188:exon3:c.C291G:p.G97G	Score=472;Name=lod=110	NA	1q32.1	NA	NA	Name=6	NA	rs11543979	0.33	0.33	0.351	0.338259	0.2396	0.3363	0.2363	0.5424	0.2382	0.23	0.37	0.2	0.54	0.255	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.12234	NA	NA	0.218488	0.445983	ID=COSM146735;OCCURENCE=1(stomach)	0.391	NA	6.9535786
957	17	10296486	10296486	G	A	exonic	MYH8	NA	synonymous SNV	MYH8:NM_002472:exon36:c.C5208T:p.D1736D	exonic	ENSG00000133020	NA	synonymous SNV	ENSG00000133020:ENST00000403437:exon36:c.C5208T:p.D1736D	Score=602;Name=lod=373	NA	17p13.1	NA	NA	NA	NA	rs33969260	0.14	0.14	0.127	0.0954473	0.2942	0.002	0.1383	0.0212	0.0573	0.3	NA	0.16	0.03	0.1761	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.527692	NA	NA	0.24407	0.054244	NA	0.101	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117693.1;CLNDSDB=.;CLNDSDBID=.	6.9522966
957	19	46974233	46974233	G	A	exonic	PNMAL1	NA	synonymous SNV	PNMAL1:NM_001103149:exon2:c.C60T:p.D20D,PNMAL1:NM_018215:exon2:c.C60T:p.D20D	exonic	ENSG00000182013	NA	synonymous SNV	ENSG00000182013:ENST00000313683:exon2:c.C60T:p.D20D,ENSG00000182013:ENST00000438932:exon2:c.C60T:p.D20D,ENSG00000182013:ENST00000602246:exon2:c.C60T:p.D20D	Score=419;Name=lod=67	NA	19q13.32	NA	Name=ZNF263	NA	NA	rs3826851	0.22	0.22	0.202	0.214257	0.2475	0.1806	0.1988	0.2534	0.1728	0.25	0.15	0.25	0.25	0.2254	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.594737	1.594737	NA	0.241512	0.287562	NA	0.261	NA	6.9522546
957	14	100795338	100795338	G	C	exonic	SLC25A47	NA	synonymous SNV	SLC25A47:NM_207117:exon5:c.G603C:p.A201A	exonic	ENSG00000140107	NA	synonymous SNV	ENSG00000140107:ENST00000361529:exon5:c.G603C:p.A201A,ENSG00000140107:ENST00000557052:exon5:c.G165C:p.A55A	NA	NA	14q32.2	NA	Name=ERalpha_a	Name=4	NA	rs8015259	0.28	0.28	0.311	0.28774	0.2266	0.246	0.1585	0.497	0.2025	0.22	0.24	0.16	0.5	0.244	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.037186	NA	NA	0.244121	0.435396	ID=COSM432667;OCCURENCE=1(breast)	0.37	NA	6.9519456
957	1	20992819	20992819	G	C	exonic	KIF17	NA	nonsynonymous SNV	KIF17:NM_001122819:exon14:c.C2796G:p.D932E,KIF17:NM_020816:exon14:c.C2799G:p.D933E	exonic	ENSG00000117245	NA	nonsynonymous SNV	ENSG00000117245:ENST00000247986:exon14:c.C2799G:p.D933E,ENSG00000117245:ENST00000375044:exon14:c.C2499G:p.D833E,ENSG00000117245:ENST00000400463:exon14:c.C2796G:p.D932E	Score=519;Name=lod=172	NA	1p36.12	NA	NA	NA	NA	rs631357	0.73	0.73	0.735	0.704473	0.8241	0.5536	0.7464	0.7572	0.636	0.82	0.56	0.78	0.74	0.7523	0.82	1	T	0.0	B	0.0	B	.	.	1.000	P	-1.135	N	0.04	T	-0.942	T	0.000	T	0.1	-1.433	0.02	3.66	0.168	0.872	5.559	-1.433156	NA	1	0.805349	0.760781	NA	0.783	NA	6.9515844
957	3	195453243	195453243	C	T	exonic	MUC20	NA	nonsynonymous SNV	MUC20:NM_001098516:exon2:c.C1151T:p.P384L,MUC20:NM_152673:exon3:c.C1256T:p.P419L	exonic	ENSG00000176945	NA	nonsynonymous SNV	ENSG00000176945:ENST00000445522:exon1:c.C1664T:p.P555L,ENSG00000176945:ENST00000436408:exon2:c.C1769T:p.P590L,ENSG00000176945:ENST00000447234:exon2:c.C1769T:p.P590L,ENSG00000176945:ENST00000320736:exon3:c.C1256T:p.P419L	NA	NA	3q29	NA	NA	NA	NA	rs3828408	0.31	0.31	0.266	NA	NA	NA	NA	NA	NA	0.29	0.45	0.33	0.17	0.3837	0.45	0.26	T	0.093	B	0.016	B	0.993	N	1.000	P	0	N	3.36	T	-0.922	T	0.000	T	0.183	1.78	11.91	-1.57	-0.224	0.258	9.428	1.779655	1.779655	0.14	NA	NA	NA	0.087	NA	6.9496334
957	2	202598113	202598113	C	T	exonic	ALS2	NA	synonymous SNV	ALS2:NM_020919:exon13:c.G2466A:p.V822V	exonic	ENSG00000003393	NA	synonymous SNV	ENSG00000003393:ENST00000457679:exon4:c.G402A:p.V134V,ENSG00000003393:ENST00000264276:exon13:c.G2466A:p.V822V	Score=564;Name=lod=262	NA	2q33.1	NA	Name=STAT3	Name=5	NA	rs2276615	0.43	0.43	0.375	0.372404	0.5875	0.3502	0.6542	0.1006	0.3415	0.58	0.38	0.64	0.1	0.5272	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.024464	NA	NA	0.603334	0.163355	ID=COSM149044;OCCURENCE=1(breast),1(stomach)	0.428	NA	6.9486326
957	2	133019934	133019934	G	C	intergenic	ANKRD30BL,GPR39	dist=4392;dist=154213	NA	NA	ncRNA_exonic	ENSG00000233786	NA	NA	NA	Score=762;Name=lod=1662	NA	2q21.2	NA	NA	Name=134	NA	NA	NA	NA	0.066	0.0896565	0.0517	0.119	0.0331	0.0961	0.1299	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.772828	NA	NA	NA	NA	NA	NA	NA	6.9483
957	10	91352966	91352966	G	A	exonic	PANK1	NA	synonymous SNV	PANK1:NM_138316:exon4:c.C747T:p.C249C,PANK1:NM_148977:exon5:c.C1599T:p.C533C,PANK1:NM_148978:exon5:c.C924T:p.C308C	exonic	ENSG00000152782	NA	synonymous SNV	ENSG00000152782:ENST00000322191:exon4:c.C747T:p.C249C,ENSG00000152782:ENST00000307534:exon5:c.C1599T:p.C533C,ENSG00000152782:ENST00000342512:exon5:c.C924T:p.C308C,ENSG00000152782:ENST00000371774:exon6:c.C1005T:p.C335C	Score=653;Name=lod=603	NA	10q23.31	Score=755;Name=V$STAT3_01	Name=STAT3,Pbx3,BCL3	NA	NA	rs2296616	0.7	0.7	0.711	0.702476	0.5567	0.9435	0.6326	0.7095	0.6442	0.55	0.94	0.59	0.75	0.6181	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.547456	NA	NA	0.545	0.692238	NA	0.645	NA	6.9468666
957	1	94476388	94476388	C	G	exonic	ABCA4	NA	synonymous SNV	ABCA4:NM_000350:exon40:c.G5682C:p.L1894L	exonic	ENSG00000198691	NA	synonymous SNV	ENSG00000198691:ENST00000535881:exon3:c.G39C:p.L13L,ENSG00000198691:ENST00000536513:exon5:c.G492C:p.L164L,ENSG00000198691:ENST00000370225:exon40:c.G5682C:p.L1894L	Score=514;Name=lod=164	NA	1p22.1	NA	NA	NA	NA	rs1801574	0.22	0.22	0.196	0.200679	0.2495	0.12	0.2075	0.2738	0.1299	0.24	0.16	0.22	0.26	0.2197	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.67773	NA	NA	0.251744	0.244439	ID=COSM146563;OCCURENCE=1(stomach)	0.254	CLINSIG=non-pathogenic;CLNDBN=not_provided;CLNREVSTAT=single;CLNACC=RCV000085750.2;CLNDSDB=.;CLNDSDBID=.	6.9457226
957	22	19751829	19751829	C	T	exonic	TBX1	NA	synonymous SNV	TBX1:NM_005992:exon5:c.C664T:p.L222L,TBX1:NM_080646:exon5:c.C664T:p.L222L,TBX1:NM_080647:exon5:c.C664T:p.L222L	exonic	ENSG00000184058	NA	synonymous SNV	ENSG00000184058:ENST00000329705:exon5:c.C664T:p.L222L,ENSG00000184058:ENST00000332710:exon5:c.C664T:p.L222L,ENSG00000184058:ENST00000359500:exon5:c.C664T:p.L222L	Score=592;Name=lod=341	NA	22q11.21	NA	Name=SUZ12	NA	NA	rs2301558	0.29	0.29	0.297	0.341254	0.2087	0.1171	0.3127	0.6203	0.3517	0.21	0.12	0.29	0.6	0.2806	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.579489	1.579489	NA	0.232326	0.561989	NA	0.355	NA	6.9450406
958	6	40998141	40998141	G	A	exonic	UNC5CL	NA	synonymous SNV	UNC5CL:NM_173561:exon8:c.C1320T:p.C440C	exonic	ENSG00000124602	NA	synonymous SNV	ENSG00000124602:ENST00000373164:exon7:c.C1320T:p.C440C,ENSG00000124602:ENST00000244565:exon8:c.C1320T:p.C440C	Score=457;Name=lod=96	NA	6p21.1	Score=806;Name=V$PPARG_03	NA	NA	NA	rs736795	0.22	0.22	0.221	0.276558	0.2038	0.2778	0.268	0.2368	0.41	0.21	0.26	0.25	0.19	0.2752	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.477905	NA	NA	0.243953	0.234453	NA	0.181	NA	6.9437136
958	19	18377647	18377647	G	C	exonic	KIAA1683	NA	nonsynonymous SNV	KIAA1683:NM_001145304:exon3:c.C703G:p.L235V,KIAA1683:NM_001145305:exon3:c.C565G:p.L189V,KIAA1683:NM_025249:exon3:c.C703G:p.L235V	exonic	ENSG00000130518	NA	nonsynonymous SNV	ENSG00000130518:ENST00000392413:exon3:c.C703G:p.L235V,ENSG00000130518:ENST00000600328:exon3:c.C703G:p.L235V,ENSG00000130518:ENST00000600359:exon3:c.C565G:p.L189V	NA	NA	19p13.11	NA	NA	NA	NA	rs8103906	0.54	0.54	0.54	0.561302	0.4533	0.5516	0.6052	0.73	0.4233	0.45	0.51	0.54	0.71	0.4939	0.71	1	T	0.0	B	0.0	B	0.892	N	1.000	P	-0.46	N	4.1	T	-0.983	T	0.000	T	0.02	-2.365	0.004	-0.595	-0.279	-1.126	2.334	-2.36533	NA	0.96	0.442791	0.70404	NA	0.449	NA	6.9433424
958	3	149182753	149182753	C	G	intergenic	TM4SF1,TM4SF4	dist=87185;dist=9615	NA	NA	ncRNA_exonic	ENSG00000239408	NA	NA	NA	Score=313;Name=lod=25	NA	3q25.1	NA	Name=PU.1	Name=4	NA	rs58221944	0.05	0.05	0.049	0.0499201	0.0567	0.0685	0.0591	0.0121	0.0685	0.07	0.08	0.04	0.01	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.354925	NA	NA	NA	NA	NA	0.094	NA	6.9433
958	18	832355	832355	T	C	intergenic	YES1,ADCYAP1	dist=20028;dist=72589	NA	NA	ncRNA_exonic	ENSG00000266575	NA	NA	NA	Score=469;Name=lod=107	NA	18p11.32	NA	Name=c-Myc,ERRA,USF-1,Pol2(b),HNF4A_(H-171),CTCF_(SC-5916),Sin3Ak-20,HDAC2_(SC-6296),Rad21,ELF1_(SC-631),HNF4G_(SC-6558),CTCF,p300,BHLHE40,RXRA,E2F6_(H-50),TCF4,SMC3_(ab9263),TR4	Name=53	NA	rs9952316	0.18	0.18	0.167	0.189297	0.0567	0.381	0.0432	0.2572	0.1401	0.06	0.36	0.06	0.23	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.945621	NA	NA	NA	NA	NA	0.152	NA	6.9433
958	14	22133997	22133997	A	G	exonic	OR4E2	NA	nonsynonymous SNV	OR4E2:NM_001001912:exon1:c.A701G:p.Q234R	exonic	ENSG00000221977	NA	nonsynonymous SNV	ENSG00000221977:ENST00000408935:exon1:c.A701G:p.Q234R	NA	NA	14q11.2	NA	NA	NA	NA	rs970382	0.74	0.74	0.774	0.721446	0.8151	0.498	0.7046	0.9493	0.5593	0.82	0.49	0.7	0.94	0.7578	0.94	1	T	0.0	B	0.001	B	0.066	N	1.000	P	-0.505	N	8.8	T	-0.946	T	0.000	T	0.004	-2.736	0	3.78	0.422	-1.734	5.307	-2.736271	NA	1	0.817197	0.916837	NA	0.797	NA	6.9432364
958	19	12222861	12222861	T	C	ncRNA_exonic	ZNF788	NA	NA	NA	exonic	ENSG00000188474	NA	nonsynonymous SNV	ENSG00000188474:ENST00000339302:exon3:c.T499C:p.C167R	NA	NA	19p13.2	NA	NA	NA	NA	rs1975349	0.37	0.37	0.405	0.389976	0.2217	0.3363	0.2133	0.767	0.2342	0.23	0.37	0.21	0.72	0.3364	0.72	0	D	0.0	B	0.0	B	.	.	.	.	.	.	2.52	T	-1.042	T	0.000	T	0.077	1.062	9.338	0.808	-0.073	0.771	6.396	1.062272	NA	0.05	NA	NA	ID=COSM438590;OCCURENCE=1(breast)	0.471	NA	6.9419
958	4	5743512	5743512	T	C	exonic	EVC	NA	nonsynonymous SNV	EVC:NM_153717:exon6:c.T772C:p.Y258H	exonic	ENSG00000072840	NA	nonsynonymous SNV	ENSG00000072840:ENST00000264956:exon6:c.T772C:p.Y258H,ENSG00000072840:ENST00000382674:exon6:c.T772C:p.Y258H,ENSG00000072840:ENST00000509451:exon6:c.T772C:p.Y258H	NA	NA	4p16.2	NA	NA	NA	NA	rs6414624	0.77	0.77	0.746	0.744808	0.7932	0.9048	0.7839	0.5015	0.8313	0.8	0.91	0.81	0.53	0.7951	0.91	0.44	T	0.009	B	0.016	B	0.403	N	1.000	P	1.735	L	0.64	T	-1.006	T	0.000	T	0.116	0.309	5.677	2.72	0.309	1.926	8.084	0.30946	NA	0.38	0.803492	0.518619	NA	0.79	NA	6.9415414
958	19	46269076	46269076	G	A	exonic	SIX5	NA	nonsynonymous SNV	SIX5:NM_175875:exon3:c.C1903T:p.P635S	exonic	ENSG00000177045	NA	nonsynonymous SNV	ENSG00000177045:ENST00000317578:exon3:c.C1903T:p.P635S	NA	NA	19q13.32	NA	NA	NA	NA	rs2014576	0.51	0.51	0.505	0.500998	0.4523	0.6111	0.621	0.3192	0.5982	0.46	0.67	0.58	0.35	0.5066	0.67	0.23	T	0.004	B	0.002	B	0.633	N	1.000	P	0.345	N	-2.44	D	-0.954	T	0.000	T	0.053	1.919	12.37	-0.76	0.388	-0.164	1.898	1.919029	1.919029	0	0.432897	0.345064	NA	0.428	NA	6.9415364
958	1	111957693	111957693	A	G	exonic	OVGP1	NA	nonsynonymous SNV	OVGP1:NM_002557:exon11:c.T1430C:p.M477T	exonic	ENSG00000085465	NA	nonsynonymous SNV	ENSG00000085465:ENST00000369732:exon11:c.T1430C:p.M477T	NA	NA	1p13.2	NA	Name=RXRA	NA	NA	rs2485319	0.58	0.58	0.606	0.631789	0.4364	0.7718	0.3573	0.7572	0.7137	0.43	0.77	0.38	0.73	0.5137	0.77	0.72	T	0.0	B	0.0	B	0.004	N	1.000	P	-0.345	N	3.74	T	-0.939	T	0.002	T	0.004	-1.282	0.042	-1.06	-0.608	-0.339	4.432	-1.281576	NA	0.81	0.441744	0.707671	NA	0.572	NA	6.9414894
958	22	36681163	36681163	G	C	intronic	MYH9	NA	NA	NA	intronic	ENSG00000100345	NA	NA	NA	NA	NA	22q12.3	Score=948;Name=V$HOXA3_01	NA	Name=3	NA	rs56327920	0.01	0.01	0.006	0.00678914	0.0209	NA	0.0159	0.0015	NA	0.03	NA	0.02	0.0041	0.0167	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.75662	NA	NA	0.021977	0.002497	NA	NA	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000037568.1;CLNDSDB=.;CLNDSDBID=.	6.940423
958	12	56815922	56815922	C	T	exonic	TIMELESS	NA	nonsynonymous SNV	TIMELESS:NM_003920:exon20:c.G2492A:p.R831Q	exonic	ENSG00000111602	NA	nonsynonymous SNV	ENSG00000111602:ENST00000229201:exon20:c.G2489A:p.R830Q,ENSG00000111602:ENST00000553532:exon20:c.G2492A:p.R831Q	Score=459;Name=lod=98	NA	12q13.3	NA	NA	NA	NA	rs774047	0.48	0.48	0.425	0.498802	0.4503	0.7371	0.6772	0.2262	0.545	0.45	0.7	0.6	0.21	0.4898	0.7	0.67	T	0.005	B	0.004	B	0.054	N	0.000	P	-0.31	N	2.7	T	-1.026	T	0.000	T	0.059	1.83	12.08	-1.07	-0.079	-0.241	9.495	1.829831	1.829831	0.75	0.452907	0.244666	NA	0.493	NA	6.9403264
958	3	121354583	121354583	G	A	exonic	HCLS1	NA	synonymous SNV	HCLS1:NM_005335:exon9:c.C690T:p.A230A	exonic	ENSG00000180353	NA	synonymous SNV	ENSG00000180353:ENST00000428394:exon8:c.C579T:p.A193A,ENSG00000180353:ENST00000314583:exon9:c.C690T:p.A230A	Score=551;Name=lod=231	NA	3q13.33	Score=809;Name=V$CDPCR3_01	NA	NA	NA	rs3772126	0.26	0.26	0.242	0.218251	0.2505	0.4802	0.1571	0.0507	0.1851	0.25	0.46	0.19	0.06	0.2303	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.899388	1.899388	NA	0.245581	0.074671	NA	0.13	NA	6.9402856
958	11	101347093	101347093	A	G	exonic	TRPC6	NA	synonymous SNV	TRPC6:NM_004621:exon6:c.T1683C:p.N561N	exonic	ENSG00000137672	NA	synonymous SNV	ENSG00000137672:ENST00000348423:exon4:c.T1335C:p.N445N,ENSG00000137672:ENST00000360497:exon5:c.T1518C:p.N506N,ENSG00000137672:ENST00000344327:exon6:c.T1683C:p.N561N	Score=612;Name=lod=411	NA	11q22.1	Score=830;Name=V$OCT_C	NA	NA	NA	rs12366144	0.27	0.27	0.292	0.298922	0.2495	0.0724	0.2046	0.5832	0.2658	0.27	0.07	0.22	0.53	0.2398	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.929264	NA	NA	0.23773	0.521788	NA	0.326	NA	6.9396366
958	4	120214030	120214030	T	G	exonic	USP53	NA	nonsynonymous SNV	USP53:NM_019050:exon18:c.T2886G:p.S962R	exonic	ENSG00000145390	NA	nonsynonymous SNV	ENSG00000145390:ENST00000450251:exon15:c.T2886G:p.S962R,ENSG00000145390:ENST00000274030:exon19:c.T2886G:p.S962R	NA	NA	4q26	NA	NA	NA	NA	rs3749591	0.28	0.28	0.264	0.244808	0.3032	0.3859	0.2824	0.1195	0.182	0.3	0.4	0.24	0.11	0.276	0.4	0.06	T	0.501	P	0.08	B	0.767	N	1.000	P	1.845	L	0.83	T	-0.981	T	0.000	T	0.071	1.98	12.58	-1.66	-0.151	-0.174	6.327	1.979529	1.979529	0.01	0.314528	0.138977	ID=COSM149731;OCCURENCE=1(stomach)	0.275	NA	6.9396054
958	11	1642884	1642884	A	C	exonic	KRTAP5-4	NA	nonsynonymous SNV	KRTAP5-4:NM_001012709:exon1:c.T440G:p.F147C	exonic	ENSG00000241598	NA	nonsynonymous SNV	ENSG00000241598:ENST00000399682:exon1:c.T440G:p.F147C	NA	NA	11p15.5	NA	NA	NA	NA	rs6578597	0.66	0.66	0.655	0.673922	0.7087	0.5139	0.6138	0.7806	0.7014	0.7	0.53	0.66	0.75	0.6855	0.75	0.08	T	.	.	.	.	.	.	1.000	P	-3.08	N	5.8	T	-0.920	T	0.000	T	0.266	-0.174	3.154	-1.98	-1.749	-0.265	0.836	-0.173521	NA	0.08	NA	NA	ID=COSM1127832;OCCURENCE=1(prostate)	0.087	NA	6.9391334
958	17	56621286	56621286	G	T	exonic	C17orf47	NA	nonsynonymous SNV	C17orf47:NM_001038704:exon1:c.C262A:p.P88T	exonic	ENSG00000181013	NA	nonsynonymous SNV	ENSG00000181013:ENST00000321691:exon1:c.C262A:p.P88T	NA	NA	17q22	Score=827;Name=V$OLF1_01	NA	NA	NA	rs8071623	0.88	0.88	0.868	0.896366	0.7704	1	0.8718	0.9123	0.9151	0.79	1	0.84	0.9	0.841	1	1	T	0.0	B	0.0	B	0.704	N	1.000	P	-0.345	N	1.79	T	-0.989	T	0.000	T	0.093	-1.061	0.182	2.03	0.169	0.059	4.672	-1.060934	NA	1	0.784651	0.90059	NA	0.761	NA	6.9372824
958	5	137682714	137682714	T	G	UTR3	FAM53C	NM_001135647:c.*66T>G,NM_016605:c.*66T>G	NA	NA	UTR3	ENSG00000120709	ENST00000239906:c.*66T>G,ENST00000513056:c.*329T>G	NA	NA	Score=708;Name=lod=1009	NA	5q31.2	Score=771;Name=V$ROAZ_01	NA	Name=4	NA	rs2269953	0.44	0.44	0.443	0.446086	0.3966	0.5843	0.3415	0.4599	0.41	0.4	0.56	0.31	0.45	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.227108	4.227108	NA	NA	NA	NA	0.493	NA	6.9367334
958	14	38061951	38061951	G	A	intronic	FOXA1	NA	NA	NA	intronic	ENSG00000129514	NA	NA	NA	NA	NA	14q21.1	Score=942;Name=V$SP1_01	Name=CTCF	Name=14	NA	rs35502972	0.01	0.01	0.009	0.00738818	0.0249	NA	0.0101	NA	0.0051	0.03	NA	0.01	NA	0.0172	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.156368	NA	NA	0.021207	0.002959	NA	NA	NA	6.936693
958	6	29894523	29894523	G	A	intergenic	HCG4B,HLA-A	dist=1095;dist=15724	NA	NA	ncRNA_exonic	ENSG00000227262,ENSG00000230795	NA	NA	NA	Score=415;Name=lod=65	NA	6p22.1	NA	Name=AP-2gamma	Name=99	NA	rs62390374	0.1	0.1	0.059	0.120607	0.0636	0.3204	0.0476	0.003	0.184	0.06	0.28	0.05	0.002	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.958648	2.958648	NA	NA	NA	NA	0.058	NA	6.9364
958	19	56090076	56090076	G	T	exonic	ZNF579	NA	synonymous SNV	ZNF579:NM_152600:exon2:c.C930A:p.A310A	exonic	ENSG00000218891	NA	synonymous SNV	ENSG00000218891:ENST00000325421:exon2:c.C930A:p.A310A	Score=539;Name=lod=206	NA	19q13.42	NA	Name=Pol2	NA	NA	rs34164618	0.2	0.2	0.218	0.235823	0.2445	0.0754	0.268	0.2315	0.3753	0.25	0.07	0.24	0.24	0.253	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.703044	1.703044	NA	0.234102	0.230892	NA	0.094	NA	6.9350646
959	3	133167363	133167363	G	A	exonic	BFSP2	NA	synonymous SNV	BFSP2:NM_003571:exon3:c.G603A:p.A201A	exonic	ENSG00000170819	NA	synonymous SNV	ENSG00000170819:ENST00000302334:exon3:c.G603A:p.A201A	Score=619;Name=lod=439	NA	3q22.1	NA	Name=POU2F2,MEF2A,YY1_(C-20),MEF2C_(SC-13268),YY1,Oct-2,NFKB,CHD2_(N-1250),BATF	Name=16	NA	rs2276737	0.45	0.45	0.464	0.436502	0.5746	0.5853	0.3833	0.0968	0.638	0.59	0.58	0.42	0.1	0.5441	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.143778	NA	NA	0.614186	0.170903	NA	0.399	NA	6.9337806
959	21	46313442	46313442	G	T	exonic	ITGB2	NA	synonymous SNV	ITGB2:NM_000211:exon10:c.C1101A:p.V367V,ITGB2:NM_001127491:exon10:c.C1101A:p.V367V	exonic	ENSG00000160255	NA	synonymous SNV	ENSG00000160255:ENST00000397852:exon9:c.C1101A:p.V367V,ENSG00000160255:ENST00000397854:exon9:c.C930A:p.V310V,ENSG00000160255:ENST00000302347:exon10:c.C1101A:p.V367V,ENSG00000160255:ENST00000355153:exon10:c.C1101A:p.V367V,ENSG00000160255:ENST00000397857:exon10:c.C1101A:p.V367V,ENSG00000160255:ENST00000397850:exon11:c.C1101A:p.V367V	Score=477;Name=lod=116	NA	21q22.3	NA	NA	NA	NA	rs2230529	0.19	0.19	0.188	0.199081	0.2505	0.0893	0.1542	0.2292	0.2505	0.25	0.09	0.18	0.23	0.2307	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.270638	1.270638	NA	0.252326	0.218566	NA	0.109	CLINSIG=untested;CLNDBN=Leukocyte_adhesion_deficiency_type_1;CLNREVSTAT=not;CLNACC=RCV000087108.1;CLNDSDB=MedGen:OMIM:Orphanet:Orphanet;CLNDSDBID=C1861766:116920:ORPHA2968:ORPHA99842	6.9331406
959	22	33199362	33199362	G	A	intronic	SYN3,TIMP3	NA	NA	NA	intronic	ENSG00000100234,ENSG00000185666	NA	NA	NA	Score=289;Name=lod=20	NA	22q12.3	NA	Name=ZNF263	Name=81	NA	rs62232903	0.05	0.05	0.053	0.0483227	0.0686	0.0347	0.049	0.0318	0.0634	0.07	0.03	0.05	0.03	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.725455	NA	NA	NA	NA	NA	0.036	NA	6.9314
959	2	70520875	70520875	C	T	upstream	SNRPG	NA	NA	NA	UTR5	ENSG00000143977	ENST00000272348:c.-94G>A	NA	NA	NA	NA	2p13.3	Score=962;Name=V$CREBP1CJUN_01	Name=TCF12,GTF2B,GTF2F1_(RAP-74),CEBPB,IRF1,CHD2_(N-1250),TBP,ELF1_(SC-631),NFKB,HEY1,Max,c-Myc,SIX5,Oct-2,YY1,Pol2(phosphoS2),Pol2,RFX5_(N-494),ZNF263,KAP1,Pol2-4H8,GATA-2,eGFP-JunD,BRCA1_(C-1863),Sin3Ak-20,HA-E2F1,JunD,FOSL2,Pol2(b),GATA-1,TAF1,GABP,ZBTB33,E2F4,ELK4,POU2F2	Name=148	NA	rs4567961	0.12	0.12	0.118	0.126398	0.0696	0.1637	0.0937	0.2216	0.0409	0.07	0.16	0.06	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.337538	NA	NA	NA	NA	NA	0.123	NA	6.9304
959	2	160808075	160808075	C	T	exonic	PLA2R1	NA	nonsynonymous SNV	PLA2R1:NM_001007267:exon24:c.G3316A:p.G1106S,PLA2R1:NM_001195641:exon24:c.G3316A:p.G1106S,PLA2R1:NM_007366:exon24:c.G3316A:p.G1106S	exonic	ENSG00000153246	NA	nonsynonymous SNV	ENSG00000153246:ENST00000283243:exon24:c.G3316A:p.G1106S,ENSG00000153246:ENST00000392771:exon24:c.G3316A:p.G1106S	NA	NA	2q24.2	NA	NA	NA	NA	rs3828323	0.31	0.31	0.298	0.249401	0.5169	0.2917	0.2824	0.0401	0.1902	0.51	0.29	0.3	0.05	0.397	0.51	0.82	T	0.0	B	0.001	B	0.151	N	1.000	P	-0.345	N	3.39	T	-0.935	T	0.000	T	0.058	-1.337	0.031	-3.0	-0.402	-0.698	4.591	-1.336677	NA	0.88	0.490233	0.106219	NA	0.319	NA	6.9292004
959	6	32917544	32917544	C	T	exonic	HLA-DMA	NA	nonsynonymous SNV	HLA-DMA:NM_006120:exon3:c.G496A:p.V166I	exonic	ENSG00000204257	NA	nonsynonymous SNV	ENSG00000204257:ENST00000395305:exon2:c.G211A:p.V71I,ENSG00000204257:ENST00000374843:exon3:c.G496A:p.V166I,ENSG00000204257:ENST00000395303:exon3:c.G394A:p.V132I,ENSG00000204257:ENST00000422832:exon3:c.G397A:p.V133I,ENSG00000204257:ENST00000456800:exon3:c.G586A:p.V196I	NA	NA	6p21.32	NA	NA	NA	NA	rs1063478	0.15	0.15	0.132	0.173722	0.1292	0.2391	0.1974	0.0915	0.2464	0.12	0.23	0.15	0.1	0.1466	0.23	0.24	T	0.0	B	0.0	B	0.202	N	1.000	P	0.375	N	4.08	T	-0.916	T	0.003	T	0.124	-0.355	2.325	1.54	0.095	-0.119	4.046	-0.354828	NA	0.27	0.128461	0.093647	NA	0.08	NA	6.9290724
959	18	57022754	57022754	T	C	exonic	LMAN1	NA	synonymous SNV	LMAN1:NM_005570:exon2:c.A351G:p.R117R	exonic	ENSG00000074695	NA	synonymous SNV	ENSG00000074695:ENST00000251047:exon2:c.A351G:p.R117R	Score=693;Name=lod=870	NA	18q21.32	Score=699;Name=V$BRACH_01	NA	NA	NA	rs1127220	0.18	0.18	0.16	0.172724	0.2525	0.0308	0.2666	0.1762	0.1656	0.26	0.02	0.27	0.16	0.2216	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.240741	1.240741	NA	0.263953	0.201997	NA	0.152	NA	6.9286136
959	7	100395003	100395003	G	C	exonic	ZAN	NA	unknown	UNKNOWN	exonic	ENSG00000146839	NA	nonsynonymous SNV	ENSG00000146839:ENST00000546213:exon44:c.G3398C:p.G1133A,ENSG00000146839:ENST00000546292:exon44:c.G8006C:p.G2669A	NA	NA	7q22.1	NA	NA	NA	NA	rs314344	0.41	0.41	0.394	0.382388	0.6262	0.0635	0.389	0.4221	0.4018	0.62	0.06	0.41	0.48	0.5066	0.62	1	T	0.0	B	0.0	B	0.131	N	1.000	P	.	.	2.62	T	-0.928	T	0.000	T	0.135	-0.201	3.024	3.05	0.334	1.133	5.844	-0.201139	NA	NA	0.605452	0.470153	ID=COSM150341;OCCURENCE=1(stomach)	0.58	NA	6.9284147
959	17	6511781	6511781	A	G	exonic	KIAA0753	NA	synonymous SNV	KIAA0753:NM_014804:exon10:c.T1716C:p.A572A	exonic	ENSG00000198920	NA	synonymous SNV	ENSG00000198920:ENST00000589033:exon3:c.T84C:p.A28A,ENSG00000198920:ENST00000542606:exon8:c.T819C:p.A273A,ENSG00000198920:ENST00000572370:exon9:c.T819C:p.A273A,ENSG00000198920:ENST00000361413:exon10:c.T1716C:p.A572A	Score=272;Name=lod=17	NA	17p13.1	NA	Name=JunD,c-Jun	Name=36	NA	rs4796519	0.64	0.64	0.633	0.663339	0.5467	0.7103	0.6729	0.7307	0.637	0.53	0.68	0.66	0.74	0.6178	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.712356	NA	NA	0.574347	0.709969	NA	0.754	NA	6.9278196
959	6	46657057	46657057	A	G	exonic	TDRD6	NA	nonsynonymous SNV	TDRD6:NM_001010870:exon1:c.A1192G:p.T398A,TDRD6:NM_001168359:exon1:c.A1192G:p.T398A	exonic	ENSG00000180113	NA	nonsynonymous SNV	ENSG00000180113:ENST00000316081:exon1:c.A1192G:p.T398A,ENSG00000180113:ENST00000544460:exon1:c.A1192G:p.T398A	NA	NA	6p12.3	NA	NA	NA	NA	rs3799277	0.86	0.86	0.859	0.888179	0.7624	0.9097	0.8631	0.9796	0.8896	0.76	0.9	0.86	0.98	0.8335	0.98	0.79	T	0.0	B	0.0	B	0.660	N	1.000	P	-1.7	N	2.58	T	-0.907	T	0.003	T	0.017	-2.894	0.001	3.79	0.480	1.285	8.355	-2.894098	NA	1	0.809651	0.955288	NA	0.949	NA	6.9277824
959	19	10670992	10670992	C	T	exonic	KRI1	NA	nonsynonymous SNV	KRI1:NM_023008:exon9:c.G814A:p.E272K	exonic	ENSG00000129347	NA	nonsynonymous SNV	ENSG00000129347:ENST00000361821:exon8:c.G802A:p.E268K,ENSG00000129347:ENST00000312962:exon9:c.G814A:p.E272K	Score=387;Name=lod=50	NA	19p13.2	NA	NA	NA	NA	rs3745249	0.33	0.33	0.312	0.321086	0.5	0.2411	0.304	0.18	0.4223	0.49	0.23	0.36	0.2	0.4368	0.49	0.36	T	0.003	B	0.005	B	0.065	N	1.000	P	0.975	L	3.17	T	-0.937	T	0.000	T	0.159	1.135	9.627	1.37	0.585	-0.055	9.371	1.135433	NA	0.11	0.469535	0.210849	NA	0.457	NA	6.9269984
959	10	76861680	76861680	T	C	exonic	DUSP13	NA	nonsynonymous SNV	DUSP13:NM_001007273:exon3:c.A223G:p.S75G	exonic	ENSG00000079393	NA	nonsynonymous SNV	ENSG00000079393:ENST00000607131:exon3:c.A223G:p.S75G,ENSG00000079393:ENST00000607487:exon4:c.A478G:p.S160G,ENSG00000079393:ENST00000491677:exon5:c.A331G:p.S111G	NA	NA	10q22.2	NA	NA	Name=2	NA	rs6480771	0.68	0.68	0.636	0.670128	0.4483	0.8998	0.6902	0.7829	0.4949	0.45	0.91	0.63	0.8	0.5287	0.91	0.41	T	0.0	B	0.0	B	0.458	N	1.000	P	-0.805	N	3.85	T	-1.075	T	0.000	T	0.028	-0.892	0.455	-0.487	-0.309	-0.407	4.494	-0.891783	NA	1	0.429419	0.732864	NA	0.681	NA	6.9269144
959	9	79318921	79318921	A	G	exonic	PRUNE2	NA	synonymous SNV	PRUNE2:NM_015225:exon9:c.T7608C:p.C2536C	exonic	ENSG00000106772	NA	synonymous SNV	ENSG00000106772:ENST00000376718:exon9:c.T7608C:p.C2536C,ENSG00000106772:ENST00000428286:exon9:c.T6531C:p.C2177C	NA	NA	9q21.2	NA	NA	NA	NA	rs620985	0.45	0.45	0.405	0.429113	0.5865	0.3522	0.634	0.1936	0.5194	0.57	0.37	0.63	0.21	0.5509	0.63	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.973	T	0.000	T	.	-1.026	0.224	-6.06	-0.623	-1.646	9.840	-1.025963	NA	NA	0.603294	0.270727	NA	0.464	NA	6.9259726
959	1	35835740	35835740	A	G	intronic	ZMYM4	NA	NA	NA	intronic	ENSG00000146463	NA	NA	NA	NA	NA	1p34.3	Score=817;Name=V$POU3F2_01	Name=PU.1	Name=104	NA	rs12027359	0.08	0.08	0.081	0.11262	0.0209	0.0923	0.0216	0.2549	0.1002	0.02	0.06	0.02	0.24	0.0427	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.802588	1.802588	NA	0.010465	0.201997	NA	0.058	NA	6.925935
960	1	228407260	228407260	G	A	exonic	OBSCN	NA	synonymous SNV	OBSCN:NM_001271223:exon9:c.G2889A:p.E963E	exonic	ENSG00000154358	NA	synonymous SNV	ENSG00000154358:ENST00000570156:exon9:c.G2889A:p.E963E	Score=397;Name=lod=55	NA	1q42.13	Score=904;Name=V$E47_02	NA	NA	NA	rs1771484	0.29	0.29	0.268	0.277157	0.3588	0.1746	0.3487	0.3147	0.1973	0.36	0.17	0.37	0.28	0.3831	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.12802	NA	NA	NA	NA	NA	0.333	NA	6.9247666
960	9	138440527	138440527	T	C	intronic	OBP2A	NA	NA	NA	exonic	ENSG00000122136	NA	nonsynonymous SNV	ENSG00000122136:ENST00000342114:exon4:c.T293C:p.L98S,ENSG00000122136:ENST00000340780:exon5:c.T427C:p.W143R	NA	NA	9q34.3	NA	NA	NA	NA	rs2590501	0.44	0.44	0.337	0.486621	0.4274	0.6974	0.5778	0.2579	0.5746	0.38	0.66	0.5	0.25	0.4608	0.66	0.15	T	0.0	B	0.0	B	.	.	1.000	P	.	.	1.41	T	-0.952	T	0.000	T	0.214	-2.752	0	-2.55	-0.799	-2.631	0.522	-2.751831	NA	0.93	0.355	0.20926	NA	NA	NA	6.9234667
960	3	58416535	58416535	C	T	exonic	PDHB	NA	synonymous SNV	PDHB:NM_000925:exon6:c.G438A:p.G146G	exonic	ENSG00000168291	NA	synonymous SNV	ENSG00000168291:ENST00000383714:exon5:c.G384A:p.G128G,ENSG00000168291:ENST00000474765:exon5:c.G384A:p.G128G,ENSG00000168291:ENST00000302746:exon6:c.G438A:p.G146G,ENSG00000168291:ENST00000469364:exon6:c.G438A:p.G146G	NA	NA	3p14.3	Score=754;Name=V$ROAZ_01	NA	NA	NA	rs1126551	0.22	0.22	0.03	0.204673	0.3757	0.001	0.2839	0.2133	0.1708	0.34	NA	0.3	0.24	0.2832	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.926862	NA	NA	0.085116	0.028824	NA	0.319	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117898.2;CLNDSDB=.;CLNDSDBID=.	6.9226506
960	3	41960006	41960006	T	C	exonic	ULK4	NA	nonsynonymous SNV	ULK4:NM_017886:exon7:c.A670G:p.I224V	exonic	ENSG00000168038	NA	nonsynonymous SNV	ENSG00000168038:ENST00000301831:exon7:c.A670G:p.I224V,ENSG00000168038:ENST00000420927:exon7:c.A670G:p.I224V	NA	NA	3p22.1	NA	NA	NA	NA	rs1716975	0.69	0.69	0.667	0.679912	0.8042	0.8522	0.7997	0.2821	0.8272	0.8	0.84	0.79	0.28	0.7847	0.84	0.66	T	0.0	B	0.002	B	0.419	N	1.000	P	0.69	N	-0.1	T	-1.004	T	0.000	T	0.027	-0.583	1.381	-5.89	-1.466	0.078	4.223	-0.583388	NA	0.87	0.821928	0.344077	NA	0.645	NA	6.9225054
960	9	138440525	138440525	C	G	intronic	OBP2A	NA	NA	NA	exonic	ENSG00000122136	NA	nonsynonymous SNV	ENSG00000122136:ENST00000340780:exon5:c.C425G:p.P142R,ENSG00000122136:ENST00000471886:exon5:c.C409G:p.L137V	NA	NA	9q34.3	NA	NA	NA	NA	rs2590500	0.44	0.44	0.328	0.486621	0.4274	0.6974	0.5778	0.2579	0.5746	0.38	0.66	0.5	0.24	0.4608	0.66	0.52	T	0.994	D	0.937	D	.	.	1.000	P	.	.	1.63	T	-0.959	T	0.000	T	0.15	2.064	12.86	0.816	0.295	0.186	5.420	2.063603	2.063603	1	0.357641	0.211303	NA	NA	NA	6.9208257
960	12	72425010	72425010	T	A	intronic	TPH2	NA	NA	NA	intronic	ENSG00000139287	NA	NA	NA	Score=284;Name=lod=19	NA	12q21.1	NA	Name=eGFP-JunD,E2F6_(H-50),STAT1,TAL1_(SC-12984),GATA2_(CG2-96)	Name=4	NA	rs17110741	0.01	0.01	0.007	0.00838658	0.0249	NA	0.0202	0.0008	0.002	0.02	NA	0.02	NA	0.023	0.031	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.254339	NA	NA	0.031279	0.004085	NA	0.007	NA	6.920821
960	8	87540872	87540872	G	A	exonic	CPNE3	NA	synonymous SNV	CPNE3:NM_003909:exon3:c.G99A:p.L33L	exonic	ENSG00000085719	NA	synonymous SNV	ENSG00000085719:ENST00000198765:exon2:c.G99A:p.L33L,ENSG00000085719:ENST00000523072:exon2:c.G99A:p.L33L,ENSG00000085719:ENST00000517771:exon3:c.G99A:p.L33L,ENSG00000085719:ENST00000521271:exon3:c.G99A:p.L33L,ENSG00000085719:ENST00000522240:exon3:c.G99A:p.L33L,ENSG00000085719:ENST00000523001:exon4:c.G99A:p.L33L,ENSG00000085719:ENST00000523469:exon4:c.G99A:p.L33L	Score=484;Name=lod=124	NA	8q21.3	Score=953;Name=V$FOXO1_01	NA	NA	NA	rs10956871	0.18	0.18	0.169	0.164736	0.2555	0.0496	0.1383	0.2103	0.1472	0.27	0.06	0.18	0.2	0.2203	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.56155	NA	NA	0.27093	0.242397	NA	0.159	NA	6.9199366
960	1	179416878	179416878	C	T	intronic	AXDND1	NA	NA	NA	ncRNA_exonic	ENSG00000224620,ENSG00000236539	NA	NA	NA	Score=645;Name=lod=557	NA	1q25.2	NA	Name=SMC3_(ab9263),CTCF_(SC-5916),CTCFL_(SC-98982),CTCF,Rad21,CTCF_(C-20)	Name=32	NA	rs7521291	0.34	0.34	0.318	0.329273	0.4135	0.372	0.3357	0.1543	0.4305	0.4	0.41	0.37	0.15	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.10829	NA	NA	NA	NA	NA	0.37	NA	6.9198333
960	4	108641317	108641317	G	A	exonic	PAPSS1	NA	synonymous SNV	PAPSS1:NM_005443:exon1:c.C19T:p.L7L	exonic	ENSG00000138801	NA	synonymous SNV	ENSG00000138801:ENST00000265174:exon1:c.C19T:p.L7L	Score=403;Name=lod=58	NA	4q25	NA	Name=ZEB1_(SC-25388),HEY1,CEBPB,TBP,TAF1,Pol2-4H8,Pol2	Name=3	NA	rs1127006	0.47	0.47	0.499	0.464257	0.6044	0.3988	0.4971	0.2315	0.6789	0.61	0.43	0.5	0.31	0.5413	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.909908	1.909908	NA	0.601977	0.285974	NA	0.29	NA	6.9189896
960	17	4351560	4351560	G	A	exonic	SPNS3	NA	synonymous SNV	SPNS3:NM_182538:exon6:c.G732A:p.R244R	exonic	ENSG00000182557	NA	nonsynonymous SNV	ENSG00000182557:ENST00000575194:exon5:c.G595A:p.E199K	Score=501;Name=lod=145	NA	17p13.2	Score=898;Name=V$MYOD_01	NA	NA	NA	rs12450838	0.24	0.24	0.193	0.2498	0.3469	0.1151	0.4669	0.0794	0.365	0.35	0.1	0.44	0.09	0.3636	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.699804	NA	NA	0.37093	0.116432	NA	0.261	NA	6.91857
960	1	157668390	157668390	T	C	exonic	FCRL3	NA	nonsynonymous SNV	FCRL3:NM_052939:exon4:c.A82G:p.N28D	exonic	ENSG00000160856	NA	nonsynonymous SNV	ENSG00000160856:ENST00000368184:exon4:c.A82G:p.N28D,ENSG00000160856:ENST00000368186:exon4:c.A82G:p.N28D,ENSG00000160856:ENST00000477837:exon4:c.A82G:p.N28D,ENSG00000160856:ENST00000485028:exon4:c.A82G:p.N28D,ENSG00000160856:ENST00000492769:exon4:c.A82G:p.N28D,ENSG00000160856:ENST00000496769:exon4:c.A82G:p.N28D	NA	NA	1q23.1	NA	NA	NA	NA	rs7522061	0.51	0.51	0.504	0.470647	0.5	0.4345	0.4539	0.6203	0.2873	0.49	0.42	0.51	0.66	0.4503	0.66	0.66	T	0.0	B	0.002	B	0.268	N	1.000	P	0.515	N	2.73	T	-0.983	T	0.004	T	0.013	-0.197	3.044	-10.7	-2.887	-0.482	10.548	-0.196801	NA	0.36	0.464535	0.628007	NA	0.493	NA	6.9184984
960	5	168098235	168098235	A	G	exonic	SLIT3	NA	synonymous SNV	SLIT3:NM_001271946:exon34:c.T4116C:p.D1372D,SLIT3:NM_003062:exon34:c.T4095C:p.D1365D	exonic	ENSG00000184347	NA	synonymous SNV	ENSG00000184347:ENST00000332966:exon34:c.T4116C:p.D1372D,ENSG00000184347:ENST00000404867:exon34:c.T4095C:p.D1365D,ENSG00000184347:ENST00000519560:exon34:c.T4095C:p.D1365D	Score=437;Name=lod=80	NA	5q34	NA	NA	Name=7	NA	rs2277933	0.35	0.35	0.301	0.323083	0.2435	0.3274	0.3934	0.4705	0.1513	0.24	0.37	0.36	0.47	0.2716	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.604364	NA	NA	0.233582	0.441792	NA	0.312	NA	6.9179846
960	11	6631016	6631016	C	T	exonic	ILK	NA	synonymous SNV	ILK:NM_001014795:exon9:c.C918T:p.A306A,ILK:NM_001014794:exon10:c.C918T:p.A306A,ILK:NM_004517:exon10:c.C918T:p.A306A	exonic	ENSG00000166333	NA	synonymous SNV	ENSG00000166333:ENST00000528995:exon8:c.C735T:p.A245A,ENSG00000166333:ENST00000396751:exon9:c.C918T:p.A306A,ENSG00000166333:ENST00000537806:exon9:c.C516T:p.A172A,ENSG00000166333:ENST00000299421:exon10:c.C918T:p.A306A,ENSG00000166333:ENST00000420936:exon10:c.C918T:p.A306A	Score=610;Name=lod=403	NA	11p15.4	NA	Name=Pol2-4H8	NA	NA	rs2292195	0.19	0.19	0.162	0.160144	0.2575	0.0833	0.2219	0.1256	0.1421	0.26	0.1	0.23	0.14	0.2269	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.158062	NA	NA	0.264665	0.154475	NA	0.188	NA	6.9176016
960	12	4737715	4737715	C	T	exonic	AKAP3	NA	nonsynonymous SNV	AKAP3:NM_006422:exon4:c.G353A:p.G118E	exonic	ENSG00000111254	NA	nonsynonymous SNV	ENSG00000111254:ENST00000540967:exon3:c.G353A:p.G118E,ENSG00000111254:ENST00000228850:exon4:c.G353A:p.G118E,ENSG00000111254:ENST00000545990:exon5:c.G353A:p.G118E	NA	NA	12p13.32	NA	NA	Name=4	NA	rs2072355	0.73	0.73	0.692	0.705471	0.832	0.6538	0.8256	0.587	0.7035	0.84	0.63	0.81	0.61	0.775	0.84	1	T	0.0	B	0.001	B	0.400	N	1.000	P	1.265	L	3.42	T	-0.932	T	0.000	T	0.33	-1.134	0.115	-3.33	-0.654	-0.299	6.038	-1.133777	NA	1	0.808837	0.599637	NA	0.783	NA	6.9174964
960	9	139391636	139391636	G	A	exonic	NOTCH1	NA	synonymous SNV	NOTCH1:NM_017617:exon34:c.C6555T:p.D2185D	exonic	ENSG00000148400	NA	synonymous SNV	ENSG00000148400:ENST00000277541:exon34:c.C6555T:p.D2185D	Score=513;Name=lod=162	NA	9q34.3	Score=774;Name=V$PPARG_03	Name=NRSF	NA	NA	rs2229974	0.7	0.7	0.67	0.695088	0.5775	0.9494	0.6542	0.6278	0.6738	0.58	0.93	0.66	0.64	0.6187	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.335149	NA	NA	0.553266	0.636051	NA	0.601	NA	6.9172006
960	16	20370810	20370810	C	T	exonic	PDILT	NA	nonsynonymous SNV	PDILT:NM_174924:exon12:c.G1586A:p.G529E	exonic	ENSG00000169340	NA	nonsynonymous SNV	ENSG00000169340:ENST00000302451:exon12:c.G1586A:p.G529E	NA	NA	16p12.3	NA	NA	NA	NA	rs9652588	0.35	0.35	0.347	0.352835	0.4732	0.1538	0.3473	0.4017	0.3722	0.48	0.15	0.35	0.38	0.4424	0.5	1	T	0.0	B	0.0	B	0.211	N	1.000	P	-0.895	N	4.15	T	-0.970	T	0.000	T	0.028	-1.493	0.017	2.75	0.297	0.562	3.463	-1.492764	NA	1	0.501163	0.408988	NA	0.377	NA	6.9165704
960	2	219249013	219249013	C	T	exonic	SLC11A1	NA	synonymous SNV	SLC11A1:NM_000578:exon3:c.C198T:p.F66F	exonic	ENSG00000018280	NA	synonymous SNV	ENSG00000018280:ENST00000233202:exon3:c.C198T:p.F66F,ENSG00000018280:ENST00000354352:exon3:c.C198T:p.F66F	Score=577;Name=lod=295	NA	2q35	Score=759;Name=V$STAT5A_02	NA	NA	NA	rs2276631	0.19	0.19	0.18	0.167931	0.2505	0.0982	0.2695	0.1452	0.1135	0.23	0.11	0.25	0.16	0.2312	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.359999	1.359999	NA	0.268953	0.172038	NA	0.167	NA	6.9160136
960	12	132688137	132688137	A	G	exonic	GALNT9	NA	synonymous SNV	GALNT9:NM_021808:exon3:c.T78C:p.Y26Y,GALNT9:NM_001122636:exon7:c.T1176C:p.Y392Y	exonic	ENSG00000182870	NA	synonymous SNV	ENSG00000182870:ENST00000541995:exon2:c.T78C:p.Y26Y,ENSG00000182870:ENST00000542942:exon2:c.T78C:p.Y26Y,ENSG00000182870:ENST00000397325:exon3:c.T78C:p.Y26Y,ENSG00000182870:ENST00000538356:exon3:c.T78C:p.Y26Y,ENSG00000182870:ENST00000535228:exon4:c.T429C:p.Y143Y,ENSG00000182870:ENST00000328957:exon7:c.T1176C:p.Y392Y	Score=520;Name=lod=173	NA	12q24.33	NA	NA	NA	NA	rs7486927	0.56	0.56	0.566	0.569289	0.5716	0.4911	0.5231	0.6664	0.5491	0.58	0.48	0.52	0.66	0.5748	0.66	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.964	T	0.000	T	.	0.241	5.299	-2.38	-0.687	-0.220	10.210	0.240554	NA	NA	0.605245	0.653075	NA	0.507	NA	6.9150216
961	12	11183832	11183832	G	A	exonic	TAS2R31	NA	nonsynonymous SNV	TAS2R31:NM_176885:exon1:c.C103T:p.R35W	exonic	ENSG00000256436	NA	nonsynonymous SNV	ENSG00000256436:ENST00000390675:exon1:c.C103T:p.R35W	NA	NA	12p13.2	NA	NA	NA	NA	rs10845295	0.4	0.4	0.354	0.335463	0.4801	0.1944	0.4568	0.3434	0.2352	0.51	0.26	0.43	0.35	0.4576	0.51	1	T	0.001	B	0.0	B	.	.	1.000	P	-3.445	N	6.26	T	-0.983	T	0.000	T	0.088	-1.952	0.007	1.23	-0.166	1.722	4.695	-1.952494	NA	NA	0.481636	0.353721	NA	0.406	NA	6.9139974
961	11	5410934	5410934	T	G	exonic	OR51M1	NA	nonsynonymous SNV	OR51M1:NM_001004756:exon1:c.T306G:p.H102Q	exonic	ENSG00000184698	NA	nonsynonymous SNV	ENSG00000184698:ENST00000328611:exon1:c.T306G:p.H102Q	NA	NA	11p15.4	NA	NA	NA	NA	rs1498467	0.69	0.69	0.688	0.698083	0.8241	0.5476	0.7277	0.6815	0.7249	0.81	0.54	0.74	0.64	0.7685	0.83	0.16	T	.	.	.	.	0.604	U	1.000	P	.	.	1.25	T	-1.026	T	0.000	T	0.031	-0.136	3.335	-4.44	-0.728	-3.276	2.974	-0.135838	NA	0.11	0.826762	0.736368	NA	0.688	NA	6.9139714
961	12	53682986	53682986	C	T	exonic	ESPL1	NA	synonymous SNV	ESPL1:NM_012291:exon21:c.C4821T:p.C1607C	exonic	ENSG00000135476	NA	synonymous SNV	ENSG00000135476:ENST00000257934:exon21:c.C4821T:p.C1607C,ENSG00000135476:ENST00000552462:exon21:c.C4821T:p.C1607C	Score=566;Name=lod=266	NA	12q13.13	Score=769;Name=V$MIF1_01	NA	Name=2	NA	rs3214023	0.49	0.49	0.467	0.452676	0.6064	0.3899	0.5764	0.3449	0.4172	0.62	0.4	0.57	0.35	0.5362	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.195157	NA	NA	0.610581	0.378121	NA	0.471	NA	6.9134856
961	6	29912405	29912405	G	A	intronic	HLA-A	NA	NA	NA	exonic	ENSG00000206503	NA	nonsynonymous SNV	ENSG00000206503:ENST00000376806:exon5:c.G1024A:p.V342M	NA	NA	6p22.1	NA	Name=Pol2,Pol2-4H8	NA	NA	rs9260192	NA	NA	0.076	0.115016	0.1213	0.0585	0.1023	0.1725	0.0982	NA	NA	NA	NA	0.0696	0.088	.	.	0.438	B	0.032	B	.	.	1.000	P	.	.	5.92	T	-1.030	T	0.001	T	0.213	-0.578	1.4	-0.704	-0.206	-0.906	4.159	-0.578283	NA	0.36	0.063425	0.088528	NA	0.058	NA	6.9123417
961	19	43529026	43529026	C	T	exonic	PSG11	NA	nonsynonymous SNV	PSG11:NM_002785:exon2:c.G247A:p.V83I	exonic	ENSG00000243130	NA	nonsynonymous SNV	ENSG00000243130:ENST00000320078:exon2:c.G247A:p.V83I,ENSG00000243130:ENST00000401740:exon2:c.G247A:p.V83I,ENSG00000243130:ENST00000593983:exon2:c.G139A:p.V47I,ENSG00000243130:ENST00000598133:exon2:c.G247A:p.V83I	NA	NA	19q13.31	NA	NA	NA	NA	rs2471952	0.55	0.55	0.59	0.641973	0.4722	0.9871	0.4928	0.6407	0.5685	0.39	0.88	0.44	0.5	0.5179	0.88	0.22	T	0.004	B	0.053	B	.	.	1.000	P	0.485	N	-0.26	T	-1.022	T	0.000	T	0.04	-0.3	2.568	-1.65	-0.586	-2.856	3.934	-0.300368	NA	0.36	0.431215	0.634834	NA	NA	NA	6.9120184
961	5	178581859	178581859	G	A	exonic	ADAMTS2	NA	synonymous SNV	ADAMTS2:NM_014244:exon7:c.C1194T:p.D398D,ADAMTS2:NM_021599:exon7:c.C1194T:p.D398D	exonic	ENSG00000087116	NA	synonymous SNV	ENSG00000087116:ENST00000251582:exon7:c.C1194T:p.D398D,ENSG00000087116:ENST00000274609:exon7:c.C1194T:p.D398D	Score=590;Name=lod=332	NA	5q35.3	Score=768;Name=V$PAX6_01	NA	NA	NA	rs2278221	0.22	0.22	0.203	0.228435	0.2475	0.3185	0.2925	0.0446	0.319	0.24	0.32	0.26	0.04	0.267	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.098797	NA	NA	0.242326	0.078756	NA	0.152	NA	6.9098406
961	3	41925398	41925398	C	T	exonic	ULK4	NA	nonsynonymous SNV	ULK4:NM_017886:exon17:c.G1624A:p.A542T	exonic	ENSG00000168038	NA	nonsynonymous SNV	ENSG00000168038:ENST00000301831:exon17:c.G1624A:p.A542T,ENSG00000168038:ENST00000420927:exon17:c.G1624A:p.A542T	NA	Name=Multiple myeloma	3p22.1	NA	Name=USF-1	NA	NA	rs1052501	0.71	0.71	0.667	0.688498	0.8101	0.8532	0.8184	0.3041	0.8211	0.8	0.84	0.82	0.32	0.7885	0.84	1	T	0.0	B	0.0	B	0.465	N	1.000	P	-1.79	N	0.71	T	-0.981	T	0.000	T	0.022	-0.941	0.358	0.24	-0.461	-0.120	3.74	-0.940846	NA	1	0.825902	0.376113	NA	0.638	NA	6.9088314
961	2	45171842	45171842	A	G	exonic	SIX3	NA	synonymous SNV	SIX3:NM_005413:exon2:c.A942G:p.A314A	exonic	ENSG00000138083	NA	synonymous SNV	ENSG00000138083:ENST00000260653:exon2:c.A942G:p.A314A	Score=708;Name=lod=1009	NA	2p21	Score=712;Name=V$NRSF_01	Name=SUZ12,CtBP2,NRSF	Name=9	NA	rs338074	0.95	0.95	0.94	0.9375	0.9165	0.9901	0.9323	0.9773	0.8548	0.91	0.99	0.92	0.97	0.9215	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.343872	1.343872	NA	0.920413	0.96905	NA	0.891	NA	6.9082536
961	15	93536197	93536197	C	T	exonic	CHD2	NA	synonymous SNV	CHD2:NM_001271:exon28:c.C3564T:p.Y1188Y	exonic	ENSG00000173575	NA	synonymous SNV	ENSG00000173575:ENST00000394196:exon28:c.C3564T:p.Y1188Y,ENSG00000173575:ENST00000557381:exon28:c.C3564T:p.Y1188Y	Score=496;Name=lod=138	NA	15q26.1	NA	NA	Name=3	NA	rs2272457	0.19	0.19	0.193	0.19349	0.2604	0.1319	0.2046	0.1702	0.2117	0.25	0.14	0.21	0.16	0.2266	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.218002	NA	NA	0.273965	0.19868	NA	0.312	NA	6.9057016
961	12	4736569	4736569	A	G	exonic	AKAP3	NA	nonsynonymous SNV	AKAP3:NM_006422:exon4:c.T1499C:p.I500T	exonic	ENSG00000111254	NA	nonsynonymous SNV	ENSG00000111254:ENST00000228850:exon4:c.T1499C:p.I500T,ENSG00000111254:ENST00000545990:exon5:c.T1499C:p.I500T	NA	NA	12p13.32	NA	NA	NA	NA	rs12366671	0.09	0.09	0.078	0.0882588	0.1431	0.0774	0.1037	0.0098	0.138	0.13	0.06	0.13	0.02	0.1279	0.16	1	T	0.0	B	0.001	B	0.716	N	1.000	P	-1.7	N	3.23	T	-0.936	T	0.000	T	0.021	-1.443	0.02	0.433	-0.080	0.545	4.291	-1.442911	NA	0.92	0.156977	0.031094	NA	0.058	NA	6.9053564
962	22	41903813	41903813	A	C	exonic	ACO2	NA	synonymous SNV	ACO2:NM_001098:exon3:c.A192C:p.T64T	exonic	ENSG00000100412	NA	synonymous SNV	ENSG00000100412:ENST00000216254:exon3:c.A192C:p.T64T,ENSG00000100412:ENST00000396512:exon3:c.A192C:p.T64T	Score=483;Name=lod=122	NA	22q13.2	NA	NA	NA	NA	rs137831	0.39	0.39	0.346	0.418331	0.2306	0.5734	0.5418	0.3714	0.4274	0.22	0.52	0.53	0.38	0.3211	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.680767	NA	NA	0.211512	0.348616	NA	0.406	CLINSIG=probable-non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000116216.2|RCV000123480.1;CLNDSDB=.|.;CLNDSDBID=.|.	6.9034546
962	16	58552921	58552921	G	A	exonic	SETD6	NA	synonymous SNV	SETD6:NM_001160305:exon8:c.G1410A:p.E470E,SETD6:NM_024860:exon9:c.G1338A:p.E446E	exonic	ENSG00000103037	NA	synonymous SNV	ENSG00000103037:ENST00000219315:exon8:c.G1410A:p.E470E,ENSG00000103037:ENST00000310682:exon9:c.G1338A:p.E446E,ENSG00000103037:ENST00000394266:exon9:c.G1203A:p.E401E	Score=389;Name=lod=51	NA	16q21	NA	Name=PU.1,Pol2	Name=12	NA	rs3607	0.74	0.74	0.765	0.769569	0.5616	0.9544	0.7104	0.8026	0.7904	0.58	0.96	0.7	0.78	0.6527	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.412512	NA	NA	0.549186	0.756597	NA	0.739	NA	6.9031806
962	2	11774324	11774324	G	A	exonic	GREB1	NA	nonsynonymous SNV	GREB1:NM_014668:exon29:c.G5059A:p.D1687N	exonic	ENSG00000196208	NA	nonsynonymous SNV	ENSG00000196208:ENST00000396123:exon12:c.G2053A:p.D685N,ENSG00000196208:ENST00000234142:exon28:c.G5059A:p.D1687N,ENSG00000196208:ENST00000381486:exon29:c.G5059A:p.D1687N	NA	NA	2p25.1	NA	NA	NA	NA	rs2304402	0.41	0.41	0.42	0.404952	0.4771	0.2996	0.3573	0.4213	0.4509	0.47	0.31	0.39	0.45	0.4485	0.58	0.99	T	0.001	B	0.002	B	0.001	N	0.000	P	-0.455	N	1.02	T	-0.912	T	0.000	T	0.045	-0.281	2.656	1.17	-0.305	1.219	9.407	-0.280878	NA	0.84	0.506	0.423867	NA	0.486	NA	6.9017334
962	1	248224099	248224099	T	C	exonic	OR2L3	NA	nonsynonymous SNV	OR2L3:NM_001004687:exon1:c.T116C:p.I39T	exonic	ENSG00000198128	NA	nonsynonymous SNV	ENSG00000198128:ENST00000359959:exon1:c.T116C:p.I39T	NA	NA	1q44	NA	NA	NA	NA	rs6666048	0.21	0.21	0.189	0.188299	0.1461	0.254	0.098	0.298	0.0798	0.14	0.3	0.1	0.3	0.148	0.3	0.62	T	0.0	B	0.002	B	.	.	1.000	P	-0.155	N	7.19	T	-1.180	T	0.000	T	0.103	-2.829	0	0.726	0.023	0.425	7.338	-2.828662	NA	0.64	0.138003	0.273718	NA	0.174	NA	6.9012304
962	3	184075047	184075047	A	G	exonic	CLCN2	NA	synonymous SNV	CLCN2:NM_001171088:exon8:c.T774C:p.I258I,CLCN2:NM_001171087:exon9:c.T906C:p.I302I,CLCN2:NM_001171089:exon9:c.T906C:p.I302I,CLCN2:NM_004366:exon9:c.T906C:p.I302I	exonic	ENSG00000114859	NA	synonymous SNV	ENSG00000114859:ENST00000434054:exon8:c.T774C:p.I258I,ENSG00000114859:ENST00000265593:exon9:c.T906C:p.I302I,ENSG00000114859:ENST00000344937:exon9:c.T906C:p.I302I,ENSG00000114859:ENST00000457512:exon9:c.T906C:p.I302I	Score=441;Name=lod=83	NA	3q27.1	NA	NA	Name=2	NA	rs2228291	0.36	0.36	0.362	0.355032	0.2356	0.373	0.4352	0.4735	0.2423	0.23	0.42	0.37	0.5	0.2922	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.964669	NA	NA	0.237791	0.438266	NA	0.297	NA	6.9010756
962	21	43256252	43256252	C	T	exonic	PRDM15	NA	synonymous SNV	PRDM15:NM_001040424:exon10:c.G1359A:p.Q453Q,PRDM15:NM_022115:exon17:c.G2346A:p.Q782Q	exonic	ENSG00000141956	NA	synonymous SNV	ENSG00000141956:ENST00000447207:exon9:c.G1248A:p.Q416Q,ENSG00000141956:ENST00000398548:exon10:c.G1359A:p.Q453Q,ENSG00000141956:ENST00000422911:exon10:c.G1359A:p.Q453Q,ENSG00000141956:ENST00000441787:exon10:c.G1188A:p.Q396Q,ENSG00000141956:ENST00000447016:exon10:c.G1248A:p.Q416Q,ENSG00000141956:ENST00000449395:exon10:c.G1359A:p.Q453Q,ENSG00000141956:ENST00000538201:exon10:c.G1248A:p.Q416Q,ENSG00000141956:ENST00000269844:exon17:c.G2346A:p.Q782Q,ENSG00000141956:ENST00000433067:exon17:c.G2346A:p.Q782Q	Score=433;Name=lod=77	NA	21q22.3	NA	Name=Pol2	Name=5	NA	rs4920098	0.54	0.54	0.52	0.535743	0.5915	0.4425	0.6671	0.4599	0.5838	0.6	0.44	0.68	0.44	0.5836	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.419602	NA	NA	0.592674	0.476396	NA	0.522	NA	6.8988926
962	1	16344360	16344360	A	G	exonic	HSPB7	NA	synonymous SNV	HSPB7:NM_014424:exon1:c.T99C:p.A33A	exonic	ENSG00000173641	NA	synonymous SNV	ENSG00000173641:ENST00000311890:exon1:c.T99C:p.A33A,ENSG00000173641:ENST00000406363:exon1:c.T99C:p.A33A,ENSG00000173641:ENST00000411503:exon1:c.T99C:p.A33A,ENSG00000173641:ENST00000487046:exon1:c.T99C:p.A33A,ENSG00000173641:ENST00000545268:exon1:c.T99C:p.A33A	Score=278;Name=lod=18	NA	1p36.13	NA	Name=CTCF	Name=23	NA	rs732286	0.64	0.64	0.623	0.648962	0.5934	0.7639	0.4553	0.7103	0.6421	0.58	0.75	0.48	0.71	0.5893	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.846754	1.846754	NA	0.585136	0.682561	NA	0.652	NA	6.8988306
962	9	125239253	125239253	T	C	exonic	OR1J1	NA	nonsynonymous SNV	OR1J1:NM_001004451:exon1:c.A953G:p.N318S	exonic	ENSG00000136834	NA	nonsynonymous SNV	ENSG00000136834:ENST00000259357:exon1:c.A953G:p.N318S	NA	NA	9q33.2	NA	NA	NA	NA	rs1962091	0.64	0.64	0.611	0.65615	0.4602	0.7956	0.4741	0.8593	0.5685	0.47	0.81	0.45	0.83	0.537	0.83	1	T	0.0	B	0.0	B	.	.	1.000	P	0.345	N	2.93	T	-0.932	T	0.000	T	0.001	-2.582	0	-1.28	-1.705	-2.309	.	-2.58161	NA	1	0.437413	0.808583	NA	0.732	NA	6.8987204
962	2	238277795	238277795	A	G	exonic	COL6A3	NA	synonymous SNV	COL6A3:NM_057166:exon7:c.T2490C:p.I830I,COL6A3:NM_057167:exon9:c.T3693C:p.I1231I,COL6A3:NM_004369:exon10:c.T4311C:p.I1437I	exonic	ENSG00000163359	NA	synonymous SNV	ENSG00000163359:ENST00000472056:exon7:c.T2490C:p.I830I,ENSG00000163359:ENST00000409809:exon8:c.T3693C:p.I1231I,ENSG00000163359:ENST00000346358:exon9:c.T3711C:p.I1237I,ENSG00000163359:ENST00000347401:exon9:c.T3708C:p.I1236I,ENSG00000163359:ENST00000353578:exon9:c.T3693C:p.I1231I,ENSG00000163359:ENST00000295550:exon10:c.T4311C:p.I1437I	Score=422;Name=lod=69	NA	2q37.3	NA	NA	NA	NA	rs2646260	0.35	0.35	0.326	0.388379	0.2455	0.2956	0.3473	0.6422	0.317	0.23	0.29	0.35	0.61	0.2889	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.364636	NA	NA	0.23407	0.567635	NA	0.355	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000080938.2;CLNDSDB=.;CLNDSDBID=.	6.8981966
962	1	178483231	178483231	G	A	intronic	TEX35	NA	NA	NA	exonic	ENSG00000240021	NA	nonsynonymous SNV	ENSG00000240021:ENST00000367642:exon2:c.G109A:p.A37T	NA	NA	1q25.2	NA	NA	NA	NA	rs10913563	0.4	0.4	0.382	0.366613	0.4533	0.4048	0.4827	0.2239	0.3487	0.44	0.42	0.46	0.26	0.4029	0.49	.	.	.	.	.	.	.	.	1.000	P	.	.	0.62	T	-0.905	T	0.000	T	0.226	3.501	17.9	2.42	0.550	1.614	6.178	3.50129	3.50129	0	0.413372	0.260554	NA	0.514	NA	6.8970947
962	7	129813738	129813738	T	C	exonic	TMEM209	NA	synonymous SNV	TMEM209:NM_032842:exon12:c.A1386G:p.L462L	exonic	ENSG00000146842	NA	synonymous SNV	ENSG00000146842:ENST00000336804:exon11:c.A1257G:p.L419L,ENSG00000146842:ENST00000473456:exon11:c.A1260G:p.L420L,ENSG00000146842:ENST00000397622:exon12:c.A1386G:p.L462L,ENSG00000146842:ENST00000462753:exon12:c.A1383G:p.L461L	Score=655;Name=lod=613	NA	7q32.2	Score=721;Name=V$HOX13_01	NA	NA	NA	rs3823482	0.3	0.3	0.298	0.303514	0.2604	0.5546	0.2651	0.1346	0.3446	0.26	0.53	0.26	0.13	0.2783	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.521511	1.521511	NA	0.23213	0.146804	NA	0.275	NA	6.8958366
963	12	7276847	7276847	A	T	intronic	RBP5	NA	NA	NA	intronic	ENSG00000139194	NA	NA	NA	Score=235;Name=lod=12	NA	12p13.31	NA	Name=TCF4,c-Fos	Name=18	NA	rs12824504	0.1	0.1	0.099	0.0932508	0.1054	0.1766	0.0692	0.0038	0.1329	0.11	0.19	0.07	0.002	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.14504	2.14504	NA	NA	NA	NA	0.138	NA	6.8946
963	8	120940652	120940652	C	T	exonic	DEPTOR	NA	synonymous SNV	DEPTOR:NM_022783:exon2:c.C135T:p.H45H	exonic	ENSG00000155792	NA	synonymous SNV	ENSG00000155792:ENST00000286234:exon2:c.C135T:p.H45H	Score=613;Name=lod=415	NA	8q24.12	NA	Name=MafK_(ab50322)	NA	NA	rs16893299	0.21	0.21	0.222	0.248802	0.2416	0.0367	0.1873	0.379	0.3425	0.24	0.02	0.22	0.38	0.2673	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.671836	NA	NA	0.263721	0.359737	NA	0.399	NA	6.8940456
963	17	48559559	48559559	A	G	exonic	RSAD1	NA	synonymous SNV	RSAD1:NM_018346:exon4:c.A582G:p.V194V	exonic	ENSG00000136444	NA	synonymous SNV	ENSG00000136444:ENST00000506211:exon1:c.A102G:p.V34V,ENSG00000136444:ENST00000515221:exon2:c.A243G:p.V81V,ENSG00000136444:ENST00000258955:exon4:c.A582G:p.V194V	Score=471;Name=lod=109	NA	17q21.33	NA	NA	Name=3	NA	rs7210579	0.26	0.26	0.276	0.285343	0.2594	0.0804	0.2723	0.4909	0.2546	0.26	0.07	0.28	0.45	0.2641	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.08708	NA	NA	0.250058	0.443032	ID=COSM1384222;OCCURENCE=1(large_intestine)	0.384	NA	6.8931086
963	22	23523630	23523630	C	A	exonic	BCR	NA	synonymous SNV	BCR:NM_004327:exon1:c.C483A:p.I161I,BCR:NM_021574:exon1:c.C483A:p.I161I	exonic	ENSG00000186716	NA	synonymous SNV	ENSG00000186716:ENST00000305877:exon1:c.C483A:p.I161I,ENSG00000186716:ENST00000359540:exon1:c.C483A:p.I161I,ENSG00000186716:ENST00000398512:exon1:c.C483A:p.I161I	Score=459;Name=lod=98	NA	22q11.23	NA	NA	Name=28	NA	rs5751602	0.3	0.3	0.254	0.291534	0.2396	0.3542	0.3602	0.3238	0.1881	0.26	0.37	0.29	0.32	0.2894	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.197217	NA	NA	0.244799	0.277214	NA	0.21	NA	6.8928676
963	6	51947237	51947237	G	A	exonic	PKHD1	NA	synonymous SNV	PKHD1:NM_138694:exon4:c.C234T:p.D78D,PKHD1:NM_170724:exon4:c.C234T:p.D78D	exonic	ENSG00000170927	NA	synonymous SNV	ENSG00000170927:ENST00000340994:exon4:c.C234T:p.D78D,ENSG00000170927:ENST00000371117:exon4:c.C234T:p.D78D	NA	NA	6p12.2	Score=906;Name=V$ATF_01	NA	NA	NA	rs9474143	0.34	0.34	0.345	0.354433	0.2455	0.4306	0.2536	0.3949	0.4049	0.24	0.42	0.25	0.44	0.2844	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.480491	NA	NA	0.243953	0.396732	ID=COSM150105;OCCURENCE=1(stomach)	0.297	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000082538.1;CLNDSDB=.;CLNDSDBID=.	6.8928136
963	13	76378459	76378459	T	C	exonic	LMO7	NA	synonymous SNV	LMO7:NM_005358:exon9:c.T852C:p.F284F	exonic	ENSG00000136153	NA	synonymous SNV	ENSG00000136153:ENST00000526202:exon6:c.T579C:p.F193F,ENSG00000136153:ENST00000377499:exon8:c.T696C:p.F232F,ENSG00000136153:ENST00000341547:exon9:c.T852C:p.F284F,ENSG00000136153:ENST00000357063:exon9:c.T852C:p.F284F,ENSG00000136153:ENST00000377534:exon9:c.T852C:p.F284F	Score=523;Name=lod=178	NA	13q22.2	NA	NA	NA	NA	rs625033	0.94	0.94	0.938	0.94369	0.9245	1	0.9323	0.8896	0.9867	0.92	1	0.93	0.91	0.9362	1	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	0.391	6.124	5.22	0.891	2.833	7.798	0.391144	NA	NA	0.915	0.875397	NA	0.928	NA	6.8909666
963	5	23303772	23303772	A	C	intergenic	CDH12,PRDM9	dist=450041;dist=203952	NA	NA	ncRNA_exonic	ENSG00000250332	NA	NA	NA	Score=696;Name=lod=899	NA	5p14.2	NA	Name=Rad21,CTCF_(C-20),CTCF,SMC3_(ab9263),CTCF_(SC-5916)	Name=2	NA	rs34757351	0.06	0.06	0.046	0.0760783	0.1093	0.0446	0.1052	0.0189	0.1309	0.09	0.04	0.09	0.01	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.187282	NA	NA	NA	NA	NA	0.022	NA	6.8907
963	9	18775810	18775810	C	A	exonic	ADAMTSL1	NA	nonsynonymous SNV	ADAMTSL1:NM_001040272:exon18:c.C2467A:p.L823I	exonic	ENSG00000178031	NA	nonsynonymous SNV	ENSG00000178031:ENST00000380548:exon18:c.C2467A:p.L823I	NA	NA	9p22.1	NA	NA	NA	NA	rs934472	0.43	0.43	0.461	0.435703	0.4573	0.4603	0.3458	0.3661	0.546	0.47	0.47	0.34	0.41	0.5014	0.48	0.23	T	0.0	B	0.001	B	1.000	U	1.000	P	1.95	M	-0.0	T	-0.955	T	0.000	T	0.015	-0.973	0.303	1.61	-0.183	-0.163	7.622	-0.97288	NA	0.2	0.484732	0.375887	NA	0.464	NA	6.8899014
963	2	204322298	204322298	T	C	exonic	RAPH1	NA	synonymous SNV	RAPH1:NM_213589:exon8:c.A1113G:p.K371K,RAPH1:NM_203365:exon10:c.A1269G:p.K423K	exonic	ENSG00000173166	NA	synonymous SNV	ENSG00000173166:ENST00000418114:exon7:c.A1113G:p.K371K,ENSG00000173166:ENST00000419464:exon7:c.A1113G:p.K371K,ENSG00000173166:ENST00000319170:exon8:c.A1113G:p.K371K,ENSG00000173166:ENST00000423104:exon8:c.A1194G:p.K398K,ENSG00000173166:ENST00000439222:exon8:c.A1188G:p.K396K,ENSG00000173166:ENST00000457812:exon8:c.A1113G:p.K371K,ENSG00000173166:ENST00000374488:exon9:c.A1188G:p.K396K,ENSG00000173166:ENST00000374489:exon9:c.A1194G:p.K398K,ENSG00000173166:ENST00000374493:exon9:c.A1269G:p.K423K,ENSG00000173166:ENST00000308091:exon10:c.A1269G:p.K423K,ENSG00000173166:ENST00000453034:exon10:c.A1269G:p.K423K	Score=618;Name=lod=435	NA	2q33.2	Score=949;Name=V$AREB6_04	NA	Name=9	NA	rs2469953	0.56	0.56	0.545	0.596845	0.5905	0.4067	0.5245	0.7262	0.6759	0.57	0.37	0.57	0.74	0.5862	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.952764	NA	NA	0.601163	0.6936	NA	0.63	NA	6.8888036
963	2	43768545	43768545	T	G	intronic	THADA	NA	NA	NA	intronic	ENSG00000115970	NA	NA	NA	Score=366;Name=lod=41	NA	2p21	NA	Name=STAT3	Name=50	NA	rs72790940	0.1	0.1	0.098	0.121006	0.1133	0.0069	0.0749	0.2073	0.1626	0.11	0.01	0.08	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.519745	NA	NA	NA	NA	NA	0.152	NA	6.8867
963	11	87908563	87908563	G	A	UTR5	RAB38	NM_022337:c.-11C>T	NA	NA	exonic	ENSG00000123892	NA	unknown	UNKNOWN	NA	NA	11q14.2	NA	Name=Pol2,TAF1,ZNF263,Pol2-4H8,Egr-1,PAX5-C20	Name=68	NA	rs3812730	0.22	0.22	0.235	0.207468	0.2674	0.1667	0.2522	0.177	0.1973	0.26	0.17	0.25	0.18	0.2389	0.27	.	.	.	.	.	.	.	.	0.999	P	.	.	.	.	-0.985	T	0.000	T	.	2.172	13.22	-0.563	-0.267	-0.002	3.702	2.172124	2.172124	NA	0.274831	0.189914	NA	0.261	NA	6.8855357
964	14	77844869	77844869	A	G	exonic	SAMD15	NA	nonsynonymous SNV	SAMD15:NM_001010860:exon1:c.A1108G:p.K370E	exonic	ENSG00000100583	NA	nonsynonymous SNV	ENSG00000100583:ENST00000216471:exon1:c.A1108G:p.K370E	NA	NA	14q24.3	NA	NA	NA	NA	rs4903576	0.49	0.49	0.464	0.523163	0.497	0.0893	0.4841	0.9259	0.4806	0.49	0.08	0.54	0.92	0.4845	0.92	1	T	0.0	B	0.0	B	0.459	N	1.000	P	-0.55	N	1.52	T	-0.987	T	0.000	T	0.065	-0.988	0.279	2.43	0.262	-0.524	4.454	-0.987681	NA	1	0.46686	0.848389	ID=COSM147820;OCCURENCE=1(stomach)	0.616	NA	6.8849734
964	X	134156121	134156121	G	C	UTR3	FAM127C	NM_001078173:c.*27C>G	NA	NA	UTR3	ENSG00000212747	ENST00000391440:c.*27C>G	NA	NA	NA	NA	Xq26.3	NA	Name=Pol2	NA	NA	rs2475853	0.7	0.7	0.71622	NA	NA	NA	NA	NA	NA	0.74	0.61	0.66	0.77	0.7109	0.77	0	D	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.976	T	0.000	T	.	0.489	6.655	1.4	-0.001	-1.755	7.505	0.489293	NA	NA	0.738657	0.735364	NA	0.493	NA	6.8837764
964	18	3581966	3581966	G	A	exonic	DLGAP1	NA	synonymous SNV	DLGAP1:NM_001003809:exon5:c.C966T:p.T322T,DLGAP1:NM_001242762:exon5:c.C924T:p.T308T,DLGAP1:NM_001242764:exon5:c.C990T:p.T330T,DLGAP1:NM_001242765:exon5:c.C966T:p.T322T,DLGAP1:NM_001242763:exon6:c.C1038T:p.T346T,DLGAP1:NM_001242766:exon6:c.C996T:p.T332T,DLGAP1:NM_001242761:exon8:c.C1872T:p.T624T,DLGAP1:NM_004746:exon8:c.C1872T:p.T624T	exonic	ENSG00000170579	NA	synonymous SNV	ENSG00000170579:ENST00000400145:exon5:c.C966T:p.T322T,ENSG00000170579:ENST00000400147:exon5:c.C966T:p.T322T,ENSG00000170579:ENST00000400155:exon5:c.C990T:p.T330T,ENSG00000170579:ENST00000534970:exon5:c.C924T:p.T308T,ENSG00000170579:ENST00000581699:exon5:c.C990T:p.T330T,ENSG00000170579:ENST00000584874:exon5:c.C1872T:p.T624T,ENSG00000170579:ENST00000400149:exon6:c.C942T:p.T314T,ENSG00000170579:ENST00000400150:exon6:c.C1020T:p.T340T,ENSG00000170579:ENST00000539435:exon6:c.C996T:p.T332T,ENSG00000170579:ENST00000515196:exon7:c.C1872T:p.T624T,ENSG00000170579:ENST00000315677:exon8:c.C1872T:p.T624T,ENSG00000170579:ENST00000581527:exon8:c.C1872T:p.T624T	NA	NA	18p11.31	Score=863;Name=V$CREB_Q4	Name=GATA-2	NA	NA	rs56017170	0.15	0.15	0.116	0.123003	0.3062	0.005	0.2291	0.0303	0.1063	0.28	0.01	0.27	0.03	0.2102	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.329373	NA	NA	0.266744	0.064231	NA	0.188	NA	6.8835226
964	1	45504720	45504720	G	C	exonic	ZSWIM5	NA	synonymous SNV	ZSWIM5:NM_020883:exon8:c.C1782G:p.T594T	exonic	ENSG00000162415	NA	synonymous SNV	ENSG00000162415:ENST00000359600:exon8:c.C1782G:p.T594T	Score=576;Name=lod=291	NA	1p34.1	Score=833;Name=V$FAC1_01	Name=Pol2,TAL1_(SC-12984),GABP,p300_(F-4),eGFP-JunB,GATA-1,Pol2(b),eGFP-GATA2	NA	NA	rs7551698	0.52	0.52	0.512	0.510383	0.6183	0.4544	0.4337	0.3805	0.6871	0.62	0.52	0.49	0.39	0.5688	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.112891	NA	NA	0.596107	0.400372	NA	0.406	NA	6.8834596
964	9	131586374	131586374	G	A	exonic	C9orf114	NA	synonymous SNV	C9orf114:NM_016390:exon10:c.C891T:p.A297A	exonic	ENSG00000198917	NA	synonymous SNV	ENSG00000198917:ENST00000467582:exon2:c.C132T:p.A44A,ENSG00000198917:ENST00000361256:exon10:c.C891T:p.A297A	Score=321;Name=lod=27	NA	9q34.11	Score=866;Name=V$COUP_01	NA	NA	NA	rs7033070	0.29	0.29	0.309	0.359824	0.2535	0.2669	0.2032	0.559	0.407	0.21	0.25	0.21	0.51	0.2814	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.657767	NA	NA	0.248605	0.491602	ID=COSM455428;OCCURENCE=1(breast)	0.297	NA	6.8831616
964	15	99653800	99653800	T	C	exonic	SYNM	NA	unknown	UNKNOWN	exonic	ENSG00000182253	NA	nonsynonymous SNV	ENSG00000182253:ENST00000328642:exon3:c.T812C:p.V271A,ENSG00000182253:ENST00000336292:exon3:c.T812C:p.V271A	Score=289;Name=lod=20	NA	15q26.3	NA	NA	NA	NA	rs2305445	0.58	0.58	0.58	0.574681	0.6143	0.6944	0.5432	0.444	0.6094	0.61	0.71	0.54	0.43	0.5891	0.71	0.13	T	0.056	B	0.141	B	.	.	0.535	P	.	.	-2.33	D	-0.952	T	0.000	T	0.314	1.954	12.49	0.178	-0.537	0.350	3.313	1.95355	1.95355	0.02	0.580323	0.473836	NA	0.543	NA	6.8829437
964	10	73521371	73521371	C	T	exonic	C10orf54	NA	synonymous SNV	C10orf54:NM_022153:exon2:c.G495A:p.E165E	exonic	ENSG00000107738	NA	synonymous SNV	ENSG00000107738:ENST00000394957:exon2:c.G495A:p.E165E	Score=419;Name=lod=67	NA	10q22.1	NA	Name=CTCF_(C-20),SMC3_(ab9263),Rad21,CTCF	NA	NA	rs3747867	0.21	0.21	0.205	0.186502	0.2744	0.1935	0.1729	0.1551	0.1411	0.28	0.17	0.17	0.16	0.2573	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.04524	NA	NA	0.252907	0.181571	NA	0.167	NA	6.8820596
964	9	117166246	117166246	A	G	exonic	DFNB31	NA	nonsynonymous SNV	DFNB31:NM_001083885:exon10:c.T1199C:p.V400A,DFNB31:NM_001173425:exon10:c.T2345C:p.V782A,DFNB31:NM_015404:exon10:c.T2348C:p.V783A	exonic	ENSG00000095397	NA	nonsynonymous SNV	ENSG00000095397:ENST00000374059:exon6:c.T1295C:p.V432A,ENSG00000095397:ENST00000265134:exon10:c.T1199C:p.V400A,ENSG00000095397:ENST00000362057:exon10:c.T2348C:p.V783A	NA	NA	9q32	NA	NA	NA	NA	rs2274159	0.42	0.42	0.389	0.40635	0.4732	0.4742	0.4914	0.1906	0.499	0.47	0.49	0.51	0.2	0.4786	0.51	1	T	0.0	B	0.001	B	0.019	N	1.000	P	-1.1	N	4.13	T	-0.946	T	0.000	T	0.023	-1.149	0.104	1.09	-0.048	0.845	6.511	-1.148602	NA	1	0.499884	0.236723	NA	0.435	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000038890.1;CLNDSDB=.;CLNDSDBID=.	6.8816494
964	1	182027022	182027022	C	T	exonic	ZNF648	NA	nonsynonymous SNV	ZNF648:NM_001009992:exon2:c.G124A:p.E42K	exonic	ENSG00000179930	NA	nonsynonymous SNV	ENSG00000179930:ENST00000339948:exon2:c.G124A:p.E42K	NA	NA	1q25.3	NA	NA	NA	NA	rs12564283	0.17	0.17	0.142	0.175719	0.1471	0.2827	0.121	0.0862	0.2546	0.15	0.28	0.11	0.11	0.1681	0.28	0.48	T	0.002	B	0.001	B	.	.	1.000	P	0.255	N	3.13	T	-0.899	T	0.000	T	0.089	1.079	9.404	0.787	0.218	0.313	7.042	1.078777	NA	0.22	0.136744	0.093509	NA	0.196	NA	6.8813894
964	20	3515924	3515924	G	A	exonic	ATRN	NA	synonymous SNV	ATRN:NM_001207047:exon2:c.G87A:p.V29V,ATRN:NM_139321:exon2:c.G435A:p.V145V,ATRN:NM_139322:exon2:c.G435A:p.V145V	exonic	ENSG00000088812	NA	synonymous SNV	ENSG00000088812:ENST00000262919:exon2:c.G435A:p.V145V,ENSG00000088812:ENST00000446916:exon2:c.G435A:p.V145V	Score=646;Name=lod=561	NA	20p13	Score=845;Name=V$TAL1BETAITF2_01	NA	NA	NA	rs151518	0.2	0.2	0.194	0.191693	0.2873	0.0169	0.1945	0.3306	0.0838	0.27	0.02	0.21	0.3	0.2247	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.932477	NA	NA	0.274884	0.322061	NA	0.159	NA	6.8797826
964	14	20264814	20264814	T	G	intergenic	OR4M1,OR4N2	dist=15391;dist=30794	NA	NA	ncRNA_exonic	ENSG00000258564	NA	NA	NA	Score=313;Name=lod=25	NA	14q11.2	NA	Name=CTCF	Name=4	NA	rs140915767	0.08	0.08	0.064	0.0654952	0.1203	0.0952	0.0418	0.0061	0.0757	0.13	0.09	0.04	0.01	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.425721	2.425721	NA	NA	NA	NA	0.072	NA	6.8797
964	20	3515951	3515951	C	T	exonic	ATRN	NA	synonymous SNV	ATRN:NM_001207047:exon2:c.C114T:p.Y38Y,ATRN:NM_139321:exon2:c.C462T:p.Y154Y,ATRN:NM_139322:exon2:c.C462T:p.Y154Y	exonic	ENSG00000088812	NA	synonymous SNV	ENSG00000088812:ENST00000262919:exon2:c.C462T:p.Y154Y,ENSG00000088812:ENST00000446916:exon2:c.C462T:p.Y154Y	Score=646;Name=lod=561	NA	20p13	Score=787;Name=V$MEF2_03	NA	NA	NA	rs151519	0.2	0.2	0.19	0.192093	0.2893	0.0169	0.1945	0.3306	0.0838	0.27	0.02	0.21	0.3	0.2247	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.859567	NA	NA	0.275233	0.323196	NA	0.109	NA	6.8774336
964	12	52631313	52631313	A	G	exonic	KRT7	NA	nonsynonymous SNV	KRT7:NM_005556:exon3:c.A557G:p.H186R	exonic	ENSG00000135480	NA	nonsynonymous SNV	ENSG00000135480:ENST00000331817:exon3:c.A557G:p.H186R	NA	NA	12q13.13	NA	Name=Pol2	NA	NA	rs6580870	0.86	0.86	0.856	0.872005	0.8191	0.9028	0.8386	0.9198	0.8538	0.83	0.9	0.78	0.91	0.8322	0.92	0.67	T	0.0	B	0.001	B	0.177	N	1.000	P	-2.19	N	-1.29	T	-0.910	T	0.000	T	0.23	-0.473	1.82	-2.67	-0.702	-0.038	14.85	-0.472602	NA	0.38	0.804651	0.89832	NA	0.841	NA	6.8773824
964	2	97877440	97877440	T	C	exonic	ANKRD36	NA	nonsynonymous SNV	ANKRD36:NM_001164315:exon58:c.T3431C:p.M1144T	exonic	ENSG00000135976	NA	nonsynonymous SNV	ENSG00000135976:ENST00000420699:exon58:c.T3431C:p.M1144T,ENSG00000135976:ENST00000461153:exon58:c.T3431C:p.M1144T	NA	NA	2q11.2	NA	NA	NA	NA	rs35711845	NA	NA	0.305	0.264377	0.5129	0.1964	0.3602	0.0885	0.2485	NA	NA	NA	NA	0.4457	0.5	0.37	T	0.0	B	0.0	B	.	.	1.000	P	0	N	-1.08	T	-0.959	T	0.000	T	0.039	-0.455	1.894	-2.3	-0.591	0.779	1.549	-0.454824	NA	NA	0.497486	0.180636	NA	0.304	NA	6.8772474
964	2	170917648	170917648	A	G	exonic	UBR3	NA	synonymous SNV	UBR3:NM_172070:exon34:c.A4845G:p.L1615L	exonic	ENSG00000144357	NA	synonymous SNV	ENSG00000144357:ENST00000439681:exon9:c.A945G:p.L315L,ENSG00000144357:ENST00000392631:exon11:c.A1308G:p.L436L,ENSG00000144357:ENST00000272793:exon34:c.A4845G:p.L1615L,ENSG00000144357:ENST00000418381:exon34:c.A4845G:p.L1615L	NA	NA	2q31.1	NA	NA	NA	NA	rs10203212	0.3	0.3	0.307	0.332069	0.2525	0.4077	0.1945	0.3185	0.4519	0.26	0.38	0.22	0.34	0.2813	0.38	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.017	T	0.000	T	.	0.579	7.125	-10.7	-2.018	-0.900	6.072	0.578734	NA	NA	0.2557	0.326146	NA	0.239	NA	6.8771666
964	19	53345095	53345095	G	A	exonic	ZNF468	NA	nonsynonymous SNV	ZNF468:NM_001008801:exon4:c.C452T:p.P151L	exonic	ENSG00000204604	NA	nonsynonymous SNV	ENSG00000204604:ENST00000390651:exon4:c.C293T:p.P98L,ENSG00000204604:ENST00000595646:exon4:c.C452T:p.P151L,ENSG00000204604:ENST00000396409:exon5:c.C293T:p.P98L	NA	NA	19q13.41	NA	NA	NA	NA	rs61729939	0.09	0.09	0.092	0.110423	0.16	0.0496	0.134	0.1014	0.1176	0.15	0.05	0.1	0.06	0.1383	0.16	0.9	T	0.0	B	0.0	B	.	.	1.000	P	-2.015	N	3.63	T	-0.939	T	0.000	T	0.044	-2.302	0.004	0.63	0.125	-0.320	3.566	-2.301757	NA	1	0.15814	0.101906	NA	0.138	NA	6.8768934
964	17	7847955	7847955	C	A	exonic	CNTROB	NA	nonsynonymous SNV	CNTROB:NM_001037144:exon12:c.C1733A:p.P578Q,CNTROB:NM_053051:exon12:c.C1733A:p.P578Q	exonic	ENSG00000170037	NA	nonsynonymous SNV	ENSG00000170037:ENST00000380262:exon12:c.C1733A:p.P578Q,ENSG00000170037:ENST00000563694:exon12:c.C1733A:p.P578Q,ENSG00000170037:ENST00000565740:exon12:c.C1733A:p.P578Q	NA	NA	17p13.1	NA	NA	NA	NA	rs11650083	0.56	0.56	0.52	0.604633	0.4493	0.8016	0.6614	0.447	0.7342	0.46	0.74	0.61	0.48	0.549	0.74	0.67	T	0.005	B	0.007	B	0.952	N	1.000	P	0.46	N	1.16	T	-0.955	T	0.000	T	0.09	0.958	8.908	-2.37	-0.113	-0.104	4.562	0.957899	NA	0.42	0.459535	0.472537	ID=COSM1387479;OCCURENCE=1(large_intestine)	0.522	NA	6.8754984
964	2	29129418	29129418	A	G	exonic	WDR43	NA	synonymous SNV	WDR43:NM_015131:exon3:c.A456G:p.E152E	exonic	ENSG00000163811	NA	synonymous SNV	ENSG00000163811:ENST00000407426:exon3:c.A456G:p.E152E,ENSG00000163811:ENST00000440983:exon3:c.A189G:p.E63E	Score=637;Name=lod=517	NA	2p23.2	NA	NA	Name=22	NA	rs11688605	0.4	0.4	0.35	0.371406	0.2256	0.7907	0.4524	0.1732	0.2996	0.23	0.78	0.41	0.19	0.3445	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.890583	NA	NA	0.221331	0.179609	NA	0.355	NA	6.8752356
964	14	39644498	39644498	G	A	exonic	PNN	NA	synonymous SNV	PNN:NM_002687:exon1:c.G15A:p.V5V	exonic	ENSG00000100941	NA	synonymous SNV	ENSG00000100941:ENST00000216832:exon1:c.G15A:p.V5V,ENSG00000100941:ENST00000553331:exon1:c.G15A:p.V5V,ENSG00000100941:ENST00000556530:exon1:c.G15A:p.V5V	Score=650;Name=lod=586	NA	14q21.1	NA	Name=GTF2F1_(RAP-74),Oct-2,Pol2(phosphoS2),Pol2,TAF7_(SQ-8),YY1_(C-20),E2F6_(H-50),TAF1,SREBP1,POU2F2,E2F4,TCF12,GTF2B,TBP,NFKB,HEY1,PAX5-N19,PAX5-C20,YY1,RFX5_(N-494),Pol2-4H8,Pbx3,Sin3Ak-20,HA-E2F1,Pol2(b),ELK4	NA	NA	rs1061583	0.19	0.19	0.163	0.186701	0.2783	0.2321	0.2017	0.0091	0.2751	0.27	0.21	0.23	0.02	0.2511	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.567104	3.567104	NA	0.262209	0.051748	NA	0.196	NA	6.8750576
965	22	42537597	42537597	A	G	ncRNA_exonic	CYP2D7P1	NA	NA	NA	exonic	ENSG00000205702	NA	unknown	UNKNOWN	NA	NA	22q13.2	NA	NA	NA	NA	rs1800754	0.49	0.49	0.437	0.496206	0.4672	0.3036	0.5389	0.6528	0.4826	0.47	0.34	0.52	0.65	0.4921	0.65	1	T	0.0	B	0.0	B	0.035	N	0.000	P	.	.	.	.	-0.928	T	0.000	T	.	-1.045	0.201	2.46	0.857	1.734	8.282	-1.044666	NA	1	NA	NA	NA	0.384	NA	6.8740333
965	1	205801872	205801872	A	G	exonic	PM20D1	NA	nonsynonymous SNV	PM20D1:NM_152491:exon11:c.T1139C:p.I380T	exonic	ENSG00000162877	NA	nonsynonymous SNV	ENSG00000162877:ENST00000367136:exon11:c.T1139C:p.I380T	Score=374;Name=lod=44	NA	1q32.1	NA	NA	NA	NA	rs1361754	0.33	0.33	0.316	0.281749	0.5219	0.0129	0.3112	0.3487	0.2004	0.52	0.01	0.4	0.35	0.4147	0.52	0.54	T	0.016	B	0.015	B	0.001	N	1.000	P	0.255	N	0.27	T	-0.908	T	0.000	T	0.118	-2.402	0.003	-0.108	-0.048	0.906	7.487	-2.40219	NA	0.37	0.522907	0.401725	NA	0.449	NA	6.8738264
965	19	57089375	57089375	A	G	exonic	ZNF470	NA	synonymous SNV	ZNF470:NM_001001668:exon6:c.A1578G:p.Q526Q	exonic	ENSG00000197016	NA	synonymous SNV	ENSG00000197016:ENST00000391709:exon5:c.A1578G:p.Q526Q,ENSG00000197016:ENST00000330619:exon6:c.A1578G:p.Q526Q	NA	NA	19q13.43	NA	Name=ZNF274,SETDB1,KAP1	Name=6	NA	rs4570977	0.17	0.17	0.162	0.153554	0.2932	0.0605	0.1484	0.0847	0.2025	0.29	0.06	0.18	0.11	0.2216	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.027706	NA	NA	0.279651	0.098275	NA	0.232	NA	6.8722156
965	1	34038214	34038214	T	C	exonic	CSMD2	NA	nonsynonymous SNV	CSMD2:NM_052896:exon51:c.A7660G:p.M2554V	exonic	ENSG00000121904	NA	nonsynonymous SNV	ENSG00000121904:ENST00000373381:exon50:c.A7654G:p.M2552V,ENSG00000121904:ENST00000241312:exon51:c.A7660G:p.M2554V	NA	NA	1p35.1	Score=890;Name=V$E47_02	NA	NA	NA	rs2641962	0.5	0.5	0.47	0.509984	0.494	0.4087	0.6542	0.5424	0.4847	0.48	0.4	0.6	0.57	0.4996	0.6	0.68	T	0.0	B	0.001	B	0.036	N	0.028	P	-1.99	N	-0.0	T	-0.933	T	0.000	T	0.019	-1.389	0.024	1.67	-0.127	0.282	6.160	-1.389467	NA	0.51	0.46814	0.517703	NA	0.507	NA	6.8715934
965	1	209823354	209823354	G	A	exonic	LAMB3	NA	synonymous SNV	LAMB3:NM_001017402:exon2:c.C138T:p.T46T,LAMB3:NM_000228:exon3:c.C138T:p.T46T,LAMB3:NM_001127641:exon3:c.C138T:p.T46T	exonic	ENSG00000196878	NA	synonymous SNV	ENSG00000196878:ENST00000391911:exon2:c.C138T:p.T46T,ENSG00000196878:ENST00000356082:exon3:c.C138T:p.T46T,ENSG00000196878:ENST00000367030:exon3:c.C138T:p.T46T,ENSG00000196878:ENST00000415782:exon3:c.C138T:p.T46T	Score=558;Name=lod=247	NA	1q32.2	Score=890;Name=V$AREB6_01	NA	NA	NA	rs2228339	0.28	0.28	0.28	0.297923	0.2674	0.3393	0.4078	0.2088	0.3292	0.26	0.32	0.35	0.22	0.2779	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.525908	1.525908	NA	0.25	0.227417	ID=COSM146754;OCCURENCE=1(stomach)	0.261	NA	6.8713666
965	5	145519821	145519821	G	A	exonic	LARS	NA	synonymous SNV	LARS:NM_020117:exon21:c.C2094T:p.D698D	exonic	ENSG00000133706	NA	synonymous SNV	ENSG00000133706:ENST00000274562:exon20:c.C2013T:p.D671D,ENSG00000133706:ENST00000510191:exon20:c.C1932T:p.D644D,ENSG00000133706:ENST00000545646:exon20:c.C1956T:p.D652D,ENSG00000133706:ENST00000394434:exon21:c.C2094T:p.D698D	Score=460;Name=lod=99	NA	5q32	Score=750;Name=V$PPARA_01	NA	NA	NA	rs17493851	0.2	0.2	0.157	0.181709	0.2525	0.1984	0.3775	0.0076	0.1881	0.25	0.2	0.3	0.02	0.2645	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.331645	NA	NA	0.278837	0.060145	ID=COSM149966;OCCURENCE=1(stomach),1(large_intestine)	0.254	NA	6.8708296
965	12	103246700	103246700	C	T	exonic	PAH	NA	synonymous SNV	PAH:NM_000277:exon7:c.G735A:p.V245V	exonic	ENSG00000171759	NA	synonymous SNV	ENSG00000171759:ENST00000553106:exon7:c.G735A:p.V245V,ENSG00000171759:ENST00000307000:exon8:c.G720A:p.V240V	Score=653;Name=lod=599	NA	12q23.2	NA	NA	NA	NA	rs1042503	0.33	0.33	0.324	0.314896	0.2594	0.7629	0.196	0.0129	0.4029	0.27	0.78	0.19	0.02	0.2906	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.462717	1.462717	NA	0.246047	0.055606	NA	0.37	CLINSIG=non-pathogenic|untested;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|not;CLNACC=RCV000078529.1|RCV000089066.1;CLNDSDB=.|.;CLNDSDBID=.|.	6.8706196
965	9	79324955	79324955	C	T	exonic	PRUNE2	NA	nonsynonymous SNV	PRUNE2:NM_015225:exon8:c.G2235A:p.M745I	exonic	ENSG00000106772	NA	nonsynonymous SNV	ENSG00000106772:ENST00000376718:exon8:c.G2235A:p.M745I,ENSG00000106772:ENST00000428286:exon8:c.G1158A:p.M386I	NA	NA	9q21.2	NA	NA	NA	NA	rs11145017	0.26	0.26	0.263	0.23742	0.1551	0.4643	0.1599	0.2103	0.18	0.15	0.5	0.14	0.22	0.1851	0.5	0.42	T	0.0	B	0.0	B	0.759	N	0.001	P	0	N	1.01	T	-0.899	T	0.000	T	0.179	-1.953	0.007	-0.966	-0.419	0.401	7.249	-1.952972	NA	0.31	0.123116	0.199936	NA	0.167	NA	6.8700174
965	6	29080450	29080450	G	A	exonic	OR2J3	NA	nonsynonymous SNV	OR2J3:NM_001005216:exon1:c.G783A:p.M261I	exonic	ENSG00000204701	NA	nonsynonymous SNV	ENSG00000204701:ENST00000377169:exon1:c.G783A:p.M261I	NA	NA	6p22.1	NA	NA	NA	NA	rs3130765	0.72	0.72	0.718	0.71246	0.8191	0.6071	0.7161	0.6475	0.7965	0.85	0.59	0.71	0.67	0.8038	0.85	0.16	T	.	.	.	.	.	.	1.000	P	.	.	8.67	T	-1.104	T	0.000	T	0.051	-1.446	0.02	-1.98	-1.051	-2.464	2.460	-1.445649	NA	0.5	0.840953	0.7032	NA	0.754	NA	6.8694804
965	10	6002368	6002368	T	G	exonic	IL15RA	NA	nonsynonymous SNV	IL15RA:NM_172200:exon3:c.A446C:p.N149T,IL15RA:NM_001243539:exon4:c.A437C:p.N146T,IL15RA:NM_002189:exon4:c.A545C:p.N182T,IL15RA:NM_001256765:exon5:c.A803C:p.N268T	exonic	ENSG00000134470	NA	nonsynonymous SNV	ENSG00000134470:ENST00000379971:exon2:c.A251C:p.N84T,ENSG00000134470:ENST00000397250:exon2:c.A251C:p.N84T,ENSG00000134470:ENST00000397251:exon3:c.A350C:p.N117T,ENSG00000134470:ENST00000429135:exon3:c.A446C:p.N149T,ENSG00000134470:ENST00000528354:exon3:c.A446C:p.N149T,ENSG00000134470:ENST00000530685:exon3:c.A446C:p.N149T,ENSG00000134470:ENST00000379977:exon4:c.A545C:p.N182T,ENSG00000134470:ENST00000397248:exon4:c.A437C:p.N146T,ENSG00000134470:ENST00000397255:exon4:c.A545C:p.N182T,ENSG00000134470:ENST00000453922:exon4:c.A434C:p.N145T,ENSG00000134470:ENST00000525219:exon4:c.A437C:p.N146T,ENSG00000134470:ENST00000397246:exon5:c.A338C:p.N113T	NA	NA	10p15.1	NA	Name=Egr-1	NA	NA	rs2228059	0.52	0.52	0.522	0.550519	0.4632	0.4266	0.4928	0.7549	0.5327	0.47	0.42	0.5	0.71	0.5122	0.72	1	T	0.0	B	0.001	B	0.699	N	1.000	P	-1.355	N	2.34	T	-1.002	T	0.000	T	0.125	-2.573	0.003	1.13	-0.084	0.097	3.534	-2.573351	NA	1	0.488605	0.718793	NA	0.413	NA	6.8693284
965	19	42213772	42213772	A	G	exonic	CEACAM5	NA	nonsynonymous SNV	CEACAM5:NM_004363:exon2:c.A238G:p.I80V	exonic	ENSG00000105388,ENSG00000267881	NA	nonsynonymous SNV	ENSG00000105388:ENST00000221992:exon2:c.A238G:p.I80V,ENSG00000105388:ENST00000398599:exon2:c.A238G:p.I80V,ENSG00000105388:ENST00000405816:exon2:c.A238G:p.I80V,ENSG00000267881:ENST00000598976:exon2:c.A238G:p.I80V	NA	NA	19q13.2	NA	NA	NA	NA	rs12971352	0.14	0.14	0.122	0.163339	0.1958	NA	0.1037	0.3986	0.0225	0.17	NA	0.11	0.27	0.1451	0.3	0.95	T	0.005	B	0.07	B	.	.	1.000	P	0.165	N	-0.19	T	-0.931	T	0.000	T	0.039	-2.304	0.004	-1.31	-0.113	-0.284	4.830	-2.303796	NA	0.68	0.124302	0.300726	NA	0.232	NA	6.8681314
965	19	41928652	41928652	C	T	exonic	BCKDHA	NA	synonymous SNV	BCKDHA:NM_000709:exon7:c.C972T:p.F324F,BCKDHA:NM_001164783:exon7:c.C969T:p.F323F	exonic	ENSG00000248098,ENSG00000255730	NA	synonymous SNV	ENSG00000248098:ENST00000542943:exon6:c.C885T:p.F295F,ENSG00000248098:ENST00000269980:exon7:c.C972T:p.F324F,ENSG00000248098:ENST00000457836:exon7:c.C906T:p.F302F,ENSG00000248098:ENST00000595085:exon7:c.C1074T:p.F358F,ENSG00000255730:ENST00000540732:exon8:c.C1074T:p.F358F	Score=594;Name=lod=346	NA	19q13.2	NA	NA	NA	Score=89;Name=1150096_0_-_89	rs284652	0.61	0.61	0.64	0.616414	0.5924	0.4325	0.4885	0.8548	0.5992	0.58	0.46	0.57	0.86	0.5994	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.566035	1.566035	NA	0.607558	0.809805	NA	0.688	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000079266.3;CLNDSDB=.;CLNDSDBID=.	6.8673086
965	18	33647254	33647254	A	C	exonic	RPRD1A	NA	synonymous SNV	RPRD1A:NM_018170:exon1:c.T114G:p.R38R	exonic	ENSG00000141425	NA	synonymous SNV	ENSG00000141425:ENST00000319040:exon1:c.T114G:p.R38R,ENSG00000141425:ENST00000357384:exon1:c.T114G:p.R38R,ENSG00000141425:ENST00000399022:exon1:c.T114G:p.R38R,ENSG00000141425:ENST00000589050:exon1:c.T114G:p.R38R,ENSG00000141425:ENST00000592674:exon1:c.T114G:p.R38R	Score=715;Name=lod=1077	NA	18q12.2	Score=864;Name=V$ATF_01	Name=CEBPB,Pol2,TAF1,c-Myc,NFKB,HEY1,Sin3Ak-20,Pol2-4H8,c-Fos,Pol2(b)	Name=101	NA	rs1789517	0.95	0.95	0.922	0.936102	0.9274	1	0.9467	0.8631	0.9703	0.94	1	0.96	0.89	0.9407	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.983403	1.983403	NA	0.933093	0.871085	NA	0.884	NA	6.8654736
966	6	26285683	26285683	T	C	exonic	HIST1H4H	NA	synonymous SNV	HIST1H4H:NM_003543:exon1:c.A45G:p.G15G	exonic	ENSG00000158406	NA	synonymous SNV	ENSG00000158406:ENST00000289352:exon1:c.A45G:p.G15G,ENSG00000158406:ENST00000377727:exon1:c.A45G:p.G15G	Score=479;Name=lod=118	NA	6p22.2	NA	Name=GATA-1,TAF1,Pol2(b),SIRT6,p300_(F-4),ELK4,POU2F2,HMGN3,ZBTB33,NELFe,Pol2,GCN5,SP1,Mxi1_(bHLH),TCF4,STAT3,Pol2(phosphoS2),Ini1,Egr-1,Brg1,Sin3Ak-20,HA-E2F1,YY1_(C-20),BCLAF1_(M33-P5B11),BCL11A,TAF7_(SQ-8),ZNF263,GATA3_(SC-268),c-Fos,E2F1,GATA-2,Pol2-4H8,E2F6,Max,c-Myc,STAT1,CCNT2,STAT2,IRF3,NFKB,HEY1,eGFP-GATA2,MafK_(ab50322),Oct-2,p300_(N-15),p300,TCF12,USF-1,TBP,NF-E2,GATA2_(CG2-96),GTF2F1_(RAP-74),IRF1,RXRA,CEBPB,CHD2_(N-1250)	Name=148	NA	rs2393593	0.77	0.77	0.751	0.790535	0.5785	0.8938	0.7291	0.9266	0.7618	0.57	0.91	0.74	0.93	0.666	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.582933	2.582933	NA	0.559767	0.848616	NA	0.725	NA	6.8623996
966	12	11174276	11174276	G	A	exonic	TAS2R19	NA	nonsynonymous SNV	TAS2R19:NM_176888:exon1:c.C895T:p.R299C	exonic	ENSG00000212124	NA	nonsynonymous SNV	ENSG00000212124:ENST00000390673:exon1:c.C895T:p.R299C	NA	NA	12p13.2	NA	NA	NA	NA	rs10772420	0.5	0.5	0.393	0.34984	0.505	0.1944	0.464	0.3593	0.2566	0.6	0.44	0.53	0.39	0.4654	0.6	0.01	D	0.0	B	0.0	B	1.000	U	1.000	P	-0.345	N	5.62	T	-1.059	T	0.000	T	0.067	1.974	12.56	-1.99	-0.434	-0.548	5.710	1.974316	1.974316	0	0.501279	0.379029	NA	0.413	NA	6.8616544
966	4	16362524	16362524	G	A	intergenic	TAPT1-AS1,LDB2	dist=102714;dist=140641	NA	NA	ncRNA_exonic	ENSG00000249506	NA	NA	NA	Score=816;Name=lod=2762	NA	4p15.32	NA	Name=Pol2,YY1,HA-E2F1,c-Myc	Name=4	NA	rs11722358	0.16	0.16	0.141	0.16234	0.1392	0.0119	0.1628	0.3124	0.138	0.15	0.01	0.17	0.32	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.087011	NA	NA	NA	NA	NA	0.13	NA	6.8608
966	22	41726053	41726053	G	A	exonic	ZC3H7B	NA	synonymous SNV	ZC3H7B:NM_017590:exon6:c.G471A:p.Q157Q	exonic	ENSG00000100403	NA	synonymous SNV	ENSG00000100403:ENST00000351589:exon5:c.G471A:p.Q157Q,ENSG00000100403:ENST00000352645:exon6:c.G471A:p.Q157Q	Score=537;Name=lod=203	NA	22q13.2	Score=849;Name=V$AP4_01	NA	NA	NA	rs4822021	0.24	0.24	0.197	0.259185	0.2624	0.0754	0.5447	0.1657	0.3691	0.26	0.08	0.54	0.18	0.2888	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.03326	NA	NA	0.256163	0.1936	NA	0.297	NA	6.8593036
966	9	140652476	140652476	G	T	intronic	EHMT1	NA	NA	NA	intronic	ENSG00000181090	NA	NA	NA	NA	NA	9q34.3	NA	Name=Pol2-4H8,CTCF,Pol2	Name=92	NA	rs3125794	0.11	0.11	0.137	0.136981	0.0408	0.001	0.0677	0.4501	0.002	0.04	0.0017	0.06	0.4	0.0622	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.241169	NA	NA	0.038953	0.39537	NA	0.167	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000082218.1;CLNDSDB=.;CLNDSDBID=.	6.858047
966	14	73220020	73220020	A	G	exonic	DPF3	NA	synonymous SNV	DPF3:NM_012074:exon3:c.T253C:p.L85L	exonic	ENSG00000205683	NA	synonymous SNV	ENSG00000205683:ENST00000366353:exon3:c.T418C:p.L140L,ENSG00000205683:ENST00000381216:exon3:c.T253C:p.L85L,ENSG00000205683:ENST00000541685:exon3:c.T253C:p.L85L,ENSG00000205683:ENST00000556509:exon3:c.T253C:p.L85L,ENSG00000205683:ENST00000546183:exon4:c.T283C:p.L95L	Score=551;Name=lod=231	NA	14q24.2	Score=932;Name=V$CHOP_01	NA	NA	NA	rs3742836	0.21	0.21	0.189	0.223243	0.2744	0.2907	0.2205	0.0764	0.3016	0.26	0.26	0.22	0.09	0.2531	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.444362	1.444362	NA	0.281128	0.105638	NA	0.225	NA	6.8580386
966	16	70190401	70190401	C	T	exonic	PDPR	NA	synonymous SNV	PDPR:NM_017990:exon19:c.C2259T:p.D753D	exonic	ENSG00000090857	NA	synonymous SNV	ENSG00000090857:ENST00000563930:exon5:c.C333T:p.D111D,ENSG00000090857:ENST00000567046:exon5:c.C333T:p.D111D,ENSG00000090857:ENST00000569042:exon5:c.C408T:p.D136D,ENSG00000090857:ENST00000542659:exon6:c.C294T:p.D98D,ENSG00000090857:ENST00000398122:exon17:c.C1959T:p.D653D,ENSG00000090857:ENST00000288050:exon19:c.C2259T:p.D753D,ENSG00000090857:ENST00000568530:exon19:c.C2259T:p.D753D	Score=500;Name=lod=144	NA	16q22.1	Score=791;Name=V$ER_Q6	NA	NA	NA	rs6499302	0.35	0.35	0.356	NA	NA	NA	NA	NA	NA	0.42	0.26	0.33	0.37	0.3897	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.911857	NA	NA	0.418973	0.355024	NA	0.377	NA	6.8579936
966	1	152281007	152281007	A	G	exonic	FLG	NA	nonsynonymous SNV	FLG:NM_002016:exon3:c.T6355C:p.Y2119H	exonic	ENSG00000143631	NA	nonsynonymous SNV	ENSG00000143631:ENST00000368799:exon3:c.T6355C:p.Y2119H	NA	NA	1q21.3	NA	NA	NA	NA	rs7512553	NA	NA	0.215	0.327676	0.1282	0.4355	0.3357	0.3843	0.3395	NA	NA	NA	NA	0.2207	0.33	0.56	T	0.0	B	0.0	B	.	.	1.000	N	-2.42	N	4.33	T	-0.997	T	0.001	T	0.012	0.038	4.212	1.28	-0.057	0.121	3.517	0.038141	NA	1	0.126628	0.329324	NA	NA	NA	6.8578054
966	16	28123226	28123226	G	A	exonic	XPO6	NA	synonymous SNV	XPO6:NM_015171:exon17:c.C2253T:p.H751H,XPO6:NM_001270940:exon18:c.C2211T:p.H737H	exonic	ENSG00000169180	NA	synonymous SNV	ENSG00000169180:ENST00000304658:exon17:c.C2253T:p.H751H,ENSG00000169180:ENST00000565698:exon18:c.C2211T:p.H737H	Score=481;Name=lod=120	NA	16p11.2	Score=775;Name=V$PAX5_02	NA	NA	NA	rs205384	0.18	0.18	0.181	0.166334	0.2773	0.1032	0.2363	0.1339	0.1115	0.29	0.06	0.25	0.13	0.2402	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.229273	NA	NA	0.291519	0.146975	NA	0.21	NA	6.8576476
966	2	71417134	71417134	C	T	exonic	PAIP2B	NA	synonymous SNV	PAIP2B:NM_020459:exon3:c.G156A:p.Q52Q	exonic	ENSG00000124374	NA	synonymous SNV	ENSG00000124374:ENST00000244221:exon3:c.G156A:p.Q52Q	Score=677;Name=lod=754	NA	2p13.3	Score=769;Name=V$STAT5A_02	NA	NA	NA	rs357776	0.29	0.29	0.299	0.336661	0.2326	0.3343	0.2205	0.3343	0.5317	0.23	0.33	0.24	0.36	0.3179	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.90809	NA	NA	0.258766	0.31703	NA	0.246	NA	6.8574006
966	12	118473054	118473054	T	C	exonic	WSB2	NA	synonymous SNV	WSB2:NM_018639:exon7:c.A909G:p.P303P	exonic	ENSG00000176871	NA	synonymous SNV	ENSG00000176871:ENST00000542304:exon5:c.A234G:p.P78P,ENSG00000176871:ENST00000544233:exon5:c.A279G:p.P93P,ENSG00000176871:ENST00000535496:exon6:c.A915G:p.P305P,ENSG00000176871:ENST00000315436:exon7:c.A909G:p.P303P,ENSG00000176871:ENST00000441406:exon7:c.A960G:p.P320P	NA	NA	12q24.23	NA	Name=Pol2,Pol2-4H8	Name=35	NA	rs9788041	0.35	0.35	0.344	0.380791	0.2366	0.5446	0.3674	0.2905	0.4918	0.24	0.56	0.33	0.28	0.3179	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.390155	NA	NA	0.255116	0.278938	NA	0.333	NA	6.8570506
966	11	6023818	6023818	G	A	exonic	OR56A4	NA	synonymous SNV	OR56A4:NM_001005179:exon1:c.C561T:p.Y187Y	exonic	ENSG00000183389	NA	synonymous SNV	ENSG00000183389:ENST00000330728:exon1:c.C561T:p.Y187Y	Score=259;Name=lod=15	NA	11p15.4	NA	NA	Name=8	NA	rs10839221	0.16	0.16	0.167	0.162141	0.2684	0.0794	0.1945	0.0582	0.2556	0.27	0.08	0.19	0.07	0.2429	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.435061	NA	NA	0.298534	0.10836	NA	0.094	NA	6.8568326
966	9	69238234	69238234	G	T	exonic	CBWD6	NA	nonsynonymous SNV	CBWD6:NM_001085457:exon8:c.C658A:p.L220I	exonic	ENSG00000204790	NA	nonsynonymous SNV	ENSG00000204790:ENST00000382399:exon7:c.C598A:p.L200I,ENSG00000204790:ENST00000377457:exon8:c.C658A:p.L220I,ENSG00000204790:ENST00000377449:exon9:c.C550A:p.L184I	NA	NA	9q21.11	NA	NA	NA	NA	rs66626885	NA	NA	0.389	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4774	0.022	1	T	0.0	B	0.0	B	0.000	N	0.998	N	0.195	N	0.95	T	-1.009	T	0.037	T	0.19	-2.896	0.001	1.16	-0.192	0.096	2.910	-2.895895	NA	1	NA	NA	NA	0.022	NA	6.8559334
966	1	204970302	204970302	T	C	exonic	NFASC	NA	synonymous SNV	NFASC:NM_001005388:exon26:c.T3024C:p.P1008P	exonic	ENSG00000163531	NA	synonymous SNV	ENSG00000163531:ENST00000401399:exon25:c.T3024C:p.P1008P,ENSG00000163531:ENST00000339876:exon26:c.T3024C:p.P1008P,ENSG00000163531:ENST00000367171:exon26:c.T3300C:p.P1100P,ENSG00000163531:ENST00000367170:exon27:c.T3108C:p.P1036P,ENSG00000163531:ENST00000367172:exon28:c.T3345C:p.P1115P	NA	NA	1q32.1	NA	NA	NA	NA	rs4951151	0.21	0.21	0.186	0.230631	0.2575	0.2401	0.1787	0.1573	0.3292	0.26	0.22	0.22	0.13	0.3078	0.26	.	.	.	.	.	.	.	.	0.010	P	.	.	.	.	.	.	.	.	.	1.15	9.682	-0.904	-0.204	-1.014	6.876	1.149614	NA	NA	0.245533	0.181992	ID=COSM425087;OCCURENCE=1(breast)	0.304	NA	6.8558336
966	1	235459509	235459509	T	C	intronic	ARID4B	NA	NA	NA	ncRNA_exonic	ENSG00000236863	NA	NA	NA	Score=682;Name=lod=789	NA	1q42.3	NA	Name=TCF4,YY1,SP1,HDAC2_(SC-6296),JunD,FOSL2,MafF_(M8194),FOXA1_(C-20),p300,RXRA,FOXA2_(SC-6554),FOXA1_(SC-101058),GR	Name=88	NA	rs2891015	0.39	0.39	0.372	0.408546	0.4781	0.244	0.4928	0.2965	0.5982	0.49	0.27	0.49	0.31	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.613484	NA	NA	NA	NA	NA	0.478	NA	6.8552333
967	11	60886913	60886913	C	T	exonic	CD5	NA	nonsynonymous SNV	CD5:NM_014207:exon5:c.C671T:p.P224L	exonic	ENSG00000110448	NA	nonsynonymous SNV	ENSG00000110448:ENST00000347785:exon5:c.C671T:p.P224L	NA	NA	11q12.2	NA	NA	NA	NA	rs2241002	0.16	0.16	0.174	0.171925	0.1491	0.0625	0.1369	0.3064	0.1513	0.12	0.06	0.15	0.34	0.1543	0.34	0.11	T	0.013	B	0.003	B	0.031	N	1.000	P	1.04	L	1.55	T	-0.953	T	0.000	T	0.048	1.334	10.38	1.32	0.294	0.782	6.915	1.333753	1.333753	0.07	0.175041	0.277576	NA	0.261	NA	6.8548924
967	20	52675259	52675259	G	T	UTR5	BCAS1	NM_003657:c.-2C>A	NA	NA	UTR5	ENSG00000064787	ENST00000371440:c.-2C>A,ENST00000395961:c.-2C>A,ENST00000371435:c.-2C>A	NA	NA	Score=412;Name=lod=63	NA	20q13.2	Score=935;Name=V$SOX9_B1	NA	Name=5	NA	rs2020975	0.15	0.15	0.129	0.146765	0.164	0.3194	0.0634	0.025	0.1748	0.18	0.29	0.06	0.02	0.1533	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.043501	NA	NA	0.161512	0.041307	NA	0.094	NA	6.8545214
967	6	147830073	147830073	C	T	exonic	SAMD5	NA	synonymous SNV	SAMD5:NM_001030060:exon1:c.C9T:p.T3T	exonic	ENSG00000203727	NA	synonymous SNV	ENSG00000203727:ENST00000367474:exon1:c.C9T:p.T3T	Score=707;Name=lod=992	NA	6q24.3	NA	NA	Name=127	NA	rs66812182	0.28	0.28	0.27	0.317492	0.2724	0.2391	0.317	0.3828	0.3569	0.27	0.22	0.29	0.38	0.2832	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.434827	1.434827	NA	0.257093	0.368588	NA	0.022	NA	6.8539736
967	19	54803504	54803504	A	C	exonic	LILRA3	NA	nonsynonymous SNV	LILRA3:NM_001172654:exon3:c.T320G:p.L107R,LILRA3:NM_006865:exon3:c.T320G:p.L107R	exonic	ENSG00000170866	NA	nonsynonymous SNV	ENSG00000170866:ENST00000251390:exon3:c.T320G:p.L107R,ENSG00000170866:ENST00000391744:exon3:c.T320G:p.L107R,ENSG00000170866:ENST00000391745:exon7:c.T371G:p.L124R	NA	NA	19q13.42	NA	NA	NA	NA	rs6509862	0.45	0.45	0.426	0.435503	0.1064	0.4345	0.4337	0.8306	0.2423	0.12	0.63	0.35	0.82	0.2511	0.82	0.14	T	0.0	B	0.005	B	.	.	1.000	P	0.955	L	5.7	T	-1.097	T	0.000	T	0.096	0.03	4.167	-1.55	-0.770	-0.019	4.490	0.029547	NA	0.17	0.122198	0.763902	NA	0.486	NA	6.8536354
967	7	90338850	90338850	C	T	UTR5	CDK14	NM_012395:c.-6C>T	NA	NA	UTR5	ENSG00000058091	ENST00000265741:c.-6C>T,ENST00000406263:c.-17046C>T	NA	NA	Score=661;Name=lod=646	NA	7q21.13	Score=878;Name=V$OCT1_02	NA	Name=7	NA	rs11767691	0.12	0.12	0.122	0.135982	0.1561	0.0903	0.0922	0.1573	0.1646	0.15	0.09	0.1	0.14	0.1475	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.960218	1.960218	NA	0.176279	0.167499	NA	0.188	NA	6.8534544
967	1	233785786	233785786	A	C	intronic	KCNK1	NA	NA	NA	exonic	ENSG00000135750	NA	nonsynonymous SNV	ENSG00000135750:ENST00000446915:exon1:c.A100C:p.S34R	NA	NA	1q42.2	NA	NA	NA	NA	rs4649241	0.53	0.53	0.529	0.535743	0.4085	0.5704	0.5922	0.5809	0.5297	0.41	0.63	0.56	0.57	0.4795	0.63	0	D	.	.	.	.	.	.	1.000	P	.	.	1.33	T	-0.960	T	0.000	T	0.193	1.248	10.06	-0.683	-0.612	-0.998	2.043	1.247811	1.247811	0	0.425917	0.555936	NA	0.514	NA	6.8527497
967	17	27613677	27613677	G	A	exonic	NUFIP2	NA	synonymous SNV	NUFIP2:NM_020772:exon2:c.C1335T:p.P445P	exonic	ENSG00000108256	NA	synonymous SNV	ENSG00000108256:ENST00000225388:exon2:c.C1335T:p.P445P	Score=635;Name=lod=506	NA	17q11.2	NA	NA	Name=7	NA	rs12452857	0.16	0.16	0.136	0.154153	0.2773	0.0119	0.2839	0.0371	0.2403	0.29	0.01	0.29	0.05	0.2542	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.729601	NA	NA	0.282907	0.075579	NA	0.21	NA	6.8522596
967	6	127797179	127797179	G	A	exonic	SOGA3	NA	synonymous SNV	SOGA3:NM_001012279:exon6:c.C1992T:p.A664A	exonic	ENSG00000214338,ENSG00000255330	NA	synonymous SNV	ENSG00000214338:ENST00000368268:exon5:c.C1992T:p.A664A,ENSG00000214338:ENST00000465909:exon6:c.C1992T:p.A664A,ENSG00000255330:ENST00000481848:exon6:c.C1992T:p.A664A,ENSG00000214338:ENST00000525778:exon6:c.C1992T:p.A664A,ENSG00000214338:ENST00000556132:exon6:c.C1992T:p.A664A	Score=576;Name=lod=291	NA	6q22.33	Score=899;Name=V$ARNT_01	NA	NA	NA	rs3734448	0.37	0.37	0.328	0.374401	0.2406	0.7351	0.4467	0.2035	0.32	0.24	0.73	0.37	0.17	0.3287	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.977121	NA	NA	0.24615	0.212751	NA	0.29	NA	6.8512166
967	21	47423636	47423636	C	T	exonic	COL6A1	NA	synonymous SNV	COL6A1:NM_001848:exon35:c.C2796T:p.S932S	exonic	ENSG00000142156	NA	synonymous SNV	ENSG00000142156:ENST00000361866:exon35:c.C2796T:p.S932S	NA	NA	21q22.3	NA	NA	Name=11	NA	rs1053320	0.27	0.27	0.231	0.264177	0.2555	0.1329	0.2752	0.4251	0.183	0.25	0.15	0.28	0.43	0.2715	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.123221	NA	NA	0.288457	0.402589	ID=COSM444608;OCCURENCE=1(breast)	0.312	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000079807.2;CLNDSDB=.;CLNDSDBID=.	6.8512096
967	22	46780521	46780521	T	C	exonic	CELSR1	NA	nonsynonymous SNV	CELSR1:NM_014246:exon20:c.A6802G:p.T2268A	exonic	ENSG00000075275	NA	nonsynonymous SNV	ENSG00000075275:ENST00000262738:exon20:c.A6802G:p.T2268A	NA	NA	22q13.31	NA	NA	NA	NA	rs6007897	0.22	0.22	0.249	0.240815	0.161	0.0139	0.1254	0.6528	0.0818	0.16	0.01	0.13	0.64	0.1671	0.64	0.73	T	0.003	B	0.01	B	0.102	N	1.000	P	0	N	-0.23	T	-0.934	T	0.000	T	0.04	-1.767	0.01	0.587	-0.268	0.067	6.933	-1.766744	NA	0.85	0.15407	0.578302	NA	0.261	NA	6.8511634
967	11	7817959	7817959	G	A	exonic	OR5P2	NA	synonymous SNV	OR5P2:NM_153444:exon1:c.C531T:p.F177F	exonic	ENSG00000183303	NA	synonymous SNV	ENSG00000183303:ENST00000329434:exon1:c.C531T:p.F177F	Score=446;Name=lod=87	NA	11p15.4	Score=814;Name=V$GFI1_01	NA	NA	NA	rs73406603	0.27	0.27	0.258	0.236621	0.2763	0.128	0.2911	0.3472	0.1196	0.29	0.15	0.28	0.37	0.257	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.117378	NA	NA	0.282386	0.324929	ID=COSM1559362;OCCURENCE=1(central_nervous_system)	0.261	NA	6.8509806
967	19	49519997	49519997	A	G	intronic	LHB	NA	NA	NA	intronic	ENSG00000104826	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs4002462	0.5	0.5	0.372	0.569888	0.5825	0.3393	0.6153	0.7383	0.5348	0.5	0.31	0.54	0.68	0.5668	0.68	0	D	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.960	T	0.000	T	.	-0.817	0.632	-5.09	-2.107	-0.220	0.286	-0.816857	NA	NA	NA	NA	NA	0.391	NA	6.8507
967	11	7818151	7818151	G	A	exonic	OR5P2	NA	synonymous SNV	OR5P2:NM_153444:exon1:c.C339T:p.A113A	exonic	ENSG00000183303	NA	synonymous SNV	ENSG00000183303:ENST00000329434:exon1:c.C339T:p.A113A	Score=516;Name=lod=166	NA	11p15.4	NA	Name=MafF_(M8194)	NA	NA	rs73406606	0.27	0.27	0.27	0.236621	0.2763	0.128	0.2911	0.348	0.1186	0.29	0.15	0.28	0.37	0.2572	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.051477	NA	NA	0.282502	0.325808	ID=COSM1559364;OCCURENCE=1(central_nervous_system)	0.261	NA	6.8506646
967	10	43089965	43089965	G	A	exonic	ZNF33B	NA	nonsynonymous SNV	ZNF33B:NM_006955:exon5:c.C433T:p.R145C	exonic	ENSG00000196693	NA	nonsynonymous SNV	ENSG00000196693:ENST00000359467:exon5:c.C433T:p.R145C	NA	NA	10q11.21	NA	Name=STAT3,CEBPB	Name=52	NA	rs210280	0.77	0.77	0.762	0.727037	0.835	0.873	0.7767	0.5348	0.6902	0.84	0.87	0.78	0.53	0.7984	0.87	0.74	T	0.0	B	0.0	B	0.582	N	1.000	P	-1.7	N	3.51	T	-1.033	T	0.000	T	0.046	-0.968	0.311	-0.499	-0.496	-0.232	3.632	-0.967615	NA	0.07	0.849581	0.622389	NA	0.797	NA	6.8503524
967	13	90014489	90014489	C	A	intergenic	LINC00433,LINC00353	dist=816725;dist=186559	NA	NA	ncRNA_exonic	ENSG00000225530	NA	NA	NA	Score=783;Name=lod=2019	NA	13q31.3	NA	Name=CTCF	Name=15	NA	rs7995618	0.07	0.07	0.057	0.0535144	0.1501	0.002	0.0576	0.0045	0.0706	0.16	0.0035	0.08	NA	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.588971	NA	NA	NA	NA	NA	0.123	NA	6.8499
967	10	5567366	5567366	G	A	exonic	CALML3	NA	synonymous SNV	CALML3:NM_005185:exon1:c.G318A:p.L106L	exonic	ENSG00000178363	NA	synonymous SNV	ENSG00000178363:ENST00000315238:exon1:c.G318A:p.L106L	Score=481;Name=lod=120	NA	10p15.1	Score=855;Name=V$XBP1_01	NA	NA	NA	rs1142825	0.4	0.4	0.393	0.418331	0.2455	0.6091	0.3156	0.5076	0.3517	0.24	0.58	0.3	0.49	0.3255	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.876558	NA	NA	0.245814	0.469133	NA	0.348	NA	6.8498526
967	19	42213868	42213868	A	G	exonic	CEACAM5	NA	nonsynonymous SNV	CEACAM5:NM_004363:exon2:c.A334G:p.I112V	exonic	ENSG00000105388,ENSG00000267881	NA	nonsynonymous SNV	ENSG00000105388:ENST00000221992:exon2:c.A334G:p.I112V,ENSG00000105388:ENST00000398599:exon2:c.A334G:p.I112V,ENSG00000105388:ENST00000405816:exon2:c.A334G:p.I112V,ENSG00000267881:ENST00000598976:exon2:c.A334G:p.I112V	NA	NA	19q13.2	NA	NA	NA	NA	rs34155934	0.12	0.12	0.106	0.129593	0.1958	NA	0.0865	0.2799	0.0225	0.17	NA	0.09	0.2	0.1374	0.25	1	T	0.03	B	0.088	B	.	.	1.000	P	-2.66	N	-0.03	T	-0.997	T	0.000	T	0.043	-1.884	0.008	-0.944	0.127	-0.152	3.103	-1.883991	NA	1	0.150465	0.248071	NA	0.21	NA	6.8496684
967	9	140611436	140611436	T	C	exonic	EHMT1	NA	synonymous SNV	EHMT1:NM_001145527:exon3:c.T444C:p.P148P,EHMT1:NM_024757:exon3:c.T444C:p.P148P	exonic	ENSG00000181090	NA	synonymous SNV	ENSG00000181090:ENST00000334856:exon3:c.T351C:p.P117P,ENSG00000181090:ENST00000460843:exon3:c.T444C:p.P148P,ENSG00000181090:ENST00000462484:exon3:c.T444C:p.P148P	Score=403;Name=lod=58	NA	9q34.3	NA	NA	NA	NA	rs3812497	0.23	0.23	0.18	0.227835	0.2634	0.1429	0.4539	0.0893	0.3057	0.26	0.14	0.46	0.1	0.2791	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.520297	1.520297	NA	0.274948	0.11507	NA	0.29	CLINSIG=non-pathogenic|other;CLNDBN=Chromosome_9q_deletion_syndrome|not_specified;CLNREVSTAT=single|mult;CLNACC=RCV000055968.1|RCV000082239.3;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet|.;CLNDSDBID=NBK47079:C0795833:610253:ORPHA261494|.	6.8492186
967	15	42115747	42115747	G	C	exonic	MAPKBP1	NA	nonsynonymous SNV	MAPKBP1:NM_014994:exon29:c.G3701C:p.R1234P,MAPKBP1:NM_001128608:exon30:c.G3719C:p.R1240P	exonic	ENSG00000137802	NA	nonsynonymous SNV	ENSG00000137802:ENST00000221214:exon27:c.G3350C:p.R1117P,ENSG00000137802:ENST00000260357:exon27:c.G3218C:p.R1073P,ENSG00000137802:ENST00000457542:exon29:c.G3701C:p.R1234P,ENSG00000137802:ENST00000456763:exon30:c.G3719C:p.R1240P	NA	NA	15q15.1	NA	NA	NA	NA	rs3959569	0.24	0.24	0.217	0.234026	0.3479	0.1796	0.4121	0.0371	0.3129	0.36	0.16	0.39	0.04	0.3065	0.39	0.24	T	0.459	P	0.28	B	0.639	N	1.000	P	0.55	N	1.32	T	-0.963	T	0.000	T	0.043	1.109	9.525	-0.625	-0.686	-0.783	7.306	1.109421	NA	0.15	0.332326	0.094871	NA	0.152	NA	6.8466074
967	16	48164777	48164777	T	C	exonic	ABCC12	NA	synonymous SNV	ABCC12:NM_033226:exon8:c.A1158G:p.V386V	exonic	ENSG00000140798	NA	synonymous SNV	ENSG00000140798:ENST00000534418:exon7:c.A984G:p.V328V,ENSG00000140798:ENST00000311303:exon8:c.A1158G:p.V386V,ENSG00000140798:ENST00000416054:exon8:c.A1158G:p.V386V,ENSG00000140798:ENST00000448542:exon8:c.A1158G:p.V386V,ENSG00000140798:ENST00000497206:exon8:c.A1158G:p.V386V,ENSG00000140798:ENST00000529504:exon8:c.A1158G:p.V386V,ENSG00000140798:ENST00000532494:exon8:c.A1158G:p.V386V,ENSG00000140798:ENST00000529084:exon10:c.A1158G:p.V386V	Score=567;Name=lod=269	NA	16q12.1	Score=812;Name=V$BRN2_01	NA	NA	NA	rs12149826	0.12	0.12	0.115	0.120807	0.2714	NA	0.1931	0.0091	0.1902	0.27	NA	0.17	0.02	0.2424	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.194795	NA	NA	0.306279	0.061336	NA	0.13	NA	6.8465876
967	4	40337523	40337523	C	T	exonic	CHRNA9	NA	synonymous SNV	CHRNA9:NM_017581:exon1:c.C39T:p.I13I	exonic	ENSG00000174343	NA	synonymous SNV	ENSG00000174343:ENST00000310169:exon1:c.C39T:p.I13I	Score=488;Name=lod=128	NA	4p14	NA	Name=JunD	NA	NA	rs56241474	0.22	0.22	0.226	0.217053	0.2734	0.0496	0.2464	0.2995	0.1994	0.27	0.05	0.28	0.32	0.2425	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.258596	1.258596	NA	0.304884	0.287335	ID=COSM1178492;OCCURENCE=1(prostate)	0.239	NA	6.8458826
968	3	16242229	16242229	G	A	exonic	GALNT15	NA	synonymous SNV	GALNT15:NM_054110:exon3:c.G810A:p.G270G	exonic	ENSG00000131386	NA	nonsynonymous SNV	ENSG00000131386:ENST00000430410:exon3:c.G328A:p.G110S	Score=474;Name=lod=113	NA	3p25.1	NA	NA	NA	NA	rs7638396	0.07	0.07	0.061	0.0930511	0.0427	0.002	0.1138	0.2262	0.044	0.04	0.0017	0.1	0.18	0.0599	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.974979	1.974979	0	0.052558	0.187018	NA	0.08	NA	6.844842
968	20	47261017	47261017	T	C	exonic	PREX1	NA	synonymous SNV	PREX1:NM_020820:exon27:c.A3531G:p.R1177R	exonic	ENSG00000124126	NA	synonymous SNV	ENSG00000124126:ENST00000371941:exon27:c.A3531G:p.R1177R,ENSG00000124126:ENST00000396220:exon27:c.A3531G:p.R1177R	Score=497;Name=lod=140	NA	20q13.13	NA	NA	NA	Score=76;Name=1437513_0_+_76	rs6066802	0.3	0.3	0.271	0.320487	0.2624	0.369	0.3559	0.2118	0.4519	0.26	0.4	0.37	0.22	0.299	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.416984	1.416984	NA	0.260698	0.220835	ID=COSM149191;OCCURENCE=1(stomach)	0.297	NA	6.8445686
968	1	36642420	36642420	T	C	exonic	MAP7D1	NA	synonymous SNV	MAP7D1:NM_018067:exon8:c.T1356C:p.S452S	exonic	ENSG00000116871	NA	synonymous SNV	ENSG00000116871:ENST00000316156:exon7:c.T1245C:p.S415S,ENSG00000116871:ENST00000373151:exon8:c.T1356C:p.S452S,ENSG00000116871:ENST00000373150:exon9:c.T1260C:p.S420S	NA	NA	1p34.3	NA	NA	NA	NA	rs475591	0.76	0.76	0.739	0.750399	0.5755	0.9137	0.781	0.8896	0.5521	0.57	0.91	0.75	0.89	0.6682	0.91	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-1.025	T	0.000	T	.	0.948	8.864	-10.1	-2.763	-7.226	0.718	0.947593	NA	NA	0.579727	0.824905	NA	0.696	NA	6.8432396
968	11	17981047	17981047	C	T	exonic	SERGEF	NA	synonymous SNV	SERGEF:NM_012139:exon9:c.G981A:p.S327S	exonic	ENSG00000129158	NA	synonymous SNV	ENSG00000129158:ENST00000265965:exon9:c.G981A:p.S327S,ENSG00000129158:ENST00000525422:exon9:c.G981A:p.S327S,ENSG00000129158:ENST00000529728:exon9:c.G639A:p.S213S	NA	NA	11p15.1	NA	NA	NA	NA	rs211146	0.63	0.63	0.67	0.688498	0.6044	0.4881	0.5836	0.9221	0.7403	0.6	0.47	0.58	0.91	0.6106	0.91	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-1.040	T	0.000	T	.	2.209	13.34	-12.3	-3.475	-4.254	7.626	2.209462	2.209462	NA	0.613091	0.866136	NA	0.761	NA	6.8385756
968	19	52001485	52001485	G	A	exonic	SIGLEC12	NA	nonsynonymous SNV	SIGLEC12:NM_033329:exon4:c.C838T:p.H280Y,SIGLEC12:NM_053003:exon5:c.C1192T:p.H398Y	exonic	ENSG00000254521	NA	nonsynonymous SNV	ENSG00000254521:ENST00000598614:exon4:c.C838T:p.H280Y,ENSG00000254521:ENST00000291707:exon5:c.C1192T:p.H398Y	NA	NA	19q13.41	NA	NA	NA	NA	rs11668530	0.34	0.34	0.292	0.353435	0.498	0.2728	0.513	0.0605	0.5706	0.5	0.25	0.48	0.08	0.479	0.52	0.32	T	0.078	B	0.115	B	0.151	U	1.000	P	0.345	N	2.73	T	-0.947	T	0.000	T	0.033	0.193	5.039	1.39	1.076	0.197	6.218	0.192805	NA	1	0.518256	0.143214	NA	0.319	NA	6.8380774
968	6	32610436	32610436	T	C	exonic	HLA-DQA1	NA	synonymous SNV	HLA-DQA1:NM_002122:exon4:c.T663C:p.C221C	exonic	ENSG00000196735	NA	synonymous SNV	ENSG00000196735:ENST00000343139:exon4:c.T663C:p.C221C,ENSG00000196735:ENST00000374949:exon4:c.T663C:p.C221C,ENSG00000196735:ENST00000395363:exon4:c.T663C:p.C221C	Score=446;Name=lod=87	NA	6p21.32	Score=785;Name=V$PPARA_01	Name=Pol2-4H8	NA	NA	rs1048372	0.61	0.61	0.475	0.595248	0.6233	0.6647	0.7406	0.5492	0.454	0.61	0.61	0.74	0.52	0.6248	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.887249	NA	NA	0.581056	0.550331	NA	0.362	NA	6.8375106
968	7	25266400	25266400	G	A	exonic	NPVF	NA	synonymous SNV	NPVF:NM_022150:exon2:c.C384T:p.P128P	exonic	ENSG00000105954	NA	synonymous SNV	ENSG00000105954:ENST00000222674:exon2:c.C384T:p.P128P	Score=437;Name=lod=80	NA	7p15.3	Score=880;Name=V$E2F_02	NA	NA	NA	rs2717851	0.28	0.28	0.253	0.278355	0.2773	0.1468	0.3184	0.3722	0.2597	0.27	0.14	0.33	0.41	0.2702	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.851353	NA	NA	0.28186	0.358829	NA	0.304	NA	6.8373066
968	1	76227022	76227022	A	G	exonic	ACADM	NA	synonymous SNV	ACADM:NM_000016:exon11:c.A1161G:p.V387V,ACADM:NM_001127328:exon11:c.A1173G:p.V391V	exonic	ENSG00000117054	NA	synonymous SNV	ENSG00000117054:ENST00000543667:exon8:c.A594G:p.V198V,ENSG00000117054:ENST00000541113:exon10:c.A1053G:p.V351V,ENSG00000117054:ENST00000370841:exon11:c.A1161G:p.V387V,ENSG00000117054:ENST00000420607:exon11:c.A1173G:p.V391V,ENSG00000117054:ENST00000370834:exon12:c.A1260G:p.V420V	Score=625;Name=lod=464	NA	1p31.1	NA	NA	NA	NA	rs1061337	0.19	0.19	0.176	0.174321	0.3002	0.0228	0.2522	0.1362	0.1973	0.28	0.02	0.28	0.17	0.2333	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.824413	NA	NA	0.296628	0.158874	NA	0.217	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000077878.1;CLNDSDB=.;CLNDSDBID=.	6.8365386
968	21	15481365	15481365	G	T	exonic	LIPI	NA	nonsynonymous SNV	LIPI:NM_198996:exon10:c.C1395A:p.D465E	exonic	ENSG00000188992	NA	nonsynonymous SNV	ENSG00000188992:ENST00000344577:exon10:c.C1395A:p.D465E,ENSG00000188992:ENST00000536861:exon10:c.C1332A:p.D444E	NA	NA	21q11.2	NA	NA	NA	NA	rs7278737	0.5	0.5	0.473	0.51897	0.502	0.5099	0.5403	0.503	0.5521	0.49	0.46	0.55	0.51	0.5009	0.55	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-1.7	N	-2.02	D	-0.978	T	0.000	T	0.027	-2.715	0	0.125	-0.228	0.194	3.814	-2.714912	NA	1	0.494301	0.507944	NA	0.449	NA	6.8361324
968	17	78820329	78820329	C	T	exonic	RPTOR	NA	synonymous SNV	RPTOR:NM_001163034:exon11:c.C1269T:p.G423G,RPTOR:NM_020761:exon11:c.C1269T:p.G423G	exonic	ENSG00000141564	NA	synonymous SNV	ENSG00000141564:ENST00000537330:exon10:c.C714T:p.G238G,ENSG00000141564:ENST00000306801:exon11:c.C1269T:p.G423G,ENSG00000141564:ENST00000544334:exon11:c.C1269T:p.G423G	Score=496;Name=lod=138	NA	17q25.3	NA	Name=TCF12,CTCF	Name=9	NA	rs3751945	0.45	0.45	0.411	0.436701	0.6233	0.4345	0.5317	0.1278	0.5971	0.64	0.42	0.54	0.15	0.5777	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.659871	1.659871	NA	0.629651	0.235588	NA	0.449	NA	6.8360156
968	20	6065731	6065731	T	C	exonic	FERMT1	NA	synonymous SNV	FERMT1:NM_017671:exon12:c.A1575G:p.K525K	exonic	ENSG00000101311	NA	synonymous SNV	ENSG00000101311:ENST00000536936:exon11:c.A804G:p.K268K,ENSG00000101311:ENST00000217289:exon12:c.A1575G:p.K525K	Score=507;Name=lod=153	NA	20p12.3	Score=694;Name=V$BRACH_01	NA	NA	NA	rs2232073	0.46	0.46	0.027	0.457069	0.3797	0.6409	0.4784	0.4554	0.3344	0.35	0.64	0.45	0.41	0.3978	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.069065	NA	NA	0.053953	0.089197	NA	NA	NA	6.8352136
968	18	9887429	9887429	C	T	exonic	TXNDC2	NA	nonsynonymous SNV	TXNDC2:NM_001098529:exon2:c.C953T:p.P318L,TXNDC2:NM_032243:exon2:c.C752T:p.P251L	exonic	ENSG00000168454	NA	nonsynonymous SNV	ENSG00000168454:ENST00000306084:exon2:c.C953T:p.P318L,ENSG00000168454:ENST00000357775:exon2:c.C752T:p.P251L	NA	NA	18p11.22	NA	NA	NA	NA	rs2240908	0.09	0.09	0.072	0.247604	0.2952	0.1488	0.1787	0.3434	0.2198	0.09	0.08	0.1	0.11	0.0083	0.19	.	.	0.003	B	0.012	B	0.235	N	1.000	P	0.97	L	2.33	T	-0.979	T	0.000	T	0.031	1.227	9.978	1.67	0.245	-0.321	8.377	1.227431	NA	NA	0.194767	0.194773	NA	0.007	NA	6.8350664
969	16	9916204	9916204	C	G	exonic	GRIN2A	NA	synonymous SNV	GRIN2A:NM_001134407:exon10:c.G2085C:p.R695R,GRIN2A:NM_001134408:exon10:c.G2085C:p.R695R,GRIN2A:NM_000833:exon11:c.G2085C:p.R695R	exonic	ENSG00000183454	NA	synonymous SNV	ENSG00000183454:ENST00000396575:exon9:c.G2085C:p.R695R,ENSG00000183454:ENST00000535259:exon9:c.G1614C:p.R538R,ENSG00000183454:ENST00000562109:exon9:c.G2085C:p.R695R,ENSG00000183454:ENST00000330684:exon10:c.G2085C:p.R695R,ENSG00000183454:ENST00000404927:exon10:c.G2085C:p.R695R,ENSG00000183454:ENST00000396573:exon11:c.G2085C:p.R695R	Score=602;Name=lod=374	NA	16p13.2	NA	NA	NA	NA	rs9806806	0.26	0.26	0.27	0.28115	0.2873	0.0794	0.2176	0.5272	0.1953	0.27	0.06	0.25	0.49	0.2648	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.254902	1.254902	NA	0.279884	0.490442	NA	0.377	CLINSIG=probable-non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000117181.2|RCV000125313.1;CLNDSDB=.|.;CLNDSDBID=.|.	6.8346826
969	7	100552117	100552117	G	T	intergenic	ACHE,MUC12	dist=58576;dist=60787	NA	NA	exonic	ENSG00000169894	NA	nonsynonymous SNV	ENSG00000169894:ENST00000319509:exon1:c.G868T:p.A290S	NA	NA	7q22.1	NA	NA	NA	NA	rs62483699	NA	NA	NA	0.000399361	NA	NA	NA	0.0015	NA	NA	NA	NA	NA	0.4996	0.4	1	T	0.917	P	0.292	B	.	.	0.627	N	0	N	3.2	T	-1.066	T	0.008	T	0.16	-0.776	0.743	1.5	1.115	-0.427	3.879	-0.775751	NA	0.67	NA	NA	NA	0.384	NA	6.8337334
969	19	58806083	58806083	T	C	exonic	ZNF8	NA	synonymous SNV	ZNF8:NM_021089:exon4:c.T909C:p.H303H	exonic	ENSG00000083842	NA	synonymous SNV	ENSG00000083842:ENST00000196548:exon4:c.T909C:p.H303H	Score=420;Name=lod=68	NA	19q13.43	NA	Name=KAP1,SETDB1	NA	NA	rs260471	0.36	0.36	0.347	0.376997	0.2445	0.499	0.3271	0.4523	0.3211	0.24	0.51	0.31	0.42	0.3102	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.121921	NA	NA	0.278372	0.419655	NA	0.29	NA	6.8335946
969	6	78172992	78172992	G	A	exonic	HTR1B	NA	synonymous SNV	HTR1B:NM_000863:exon1:c.C129T:p.S43S	exonic	ENSG00000135312	NA	synonymous SNV	ENSG00000135312:ENST00000369947:exon1:c.C129T:p.S43S	Score=371;Name=lod=43	NA	6q14.1	Score=888;Name=V$ZID_01	NA	NA	NA	rs6298	0.35	0.35	0.317	0.340655	0.2644	0.5099	0.4049	0.2443	0.3292	0.28	0.54	0.4	0.22	0.3066	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.14441	NA	NA	0.262326	0.223786	NA	0.304	NA	6.8333406
969	1	144879375	144879375	T	C	exonic	PDE4DIP	NA	nonsynonymous SNV	PDE4DIP:NM_001198834:exon27:c.A4075G:p.K1359E,PDE4DIP:NM_014644:exon27:c.A4075G:p.K1359E,PDE4DIP:NM_001198832:exon30:c.A3943G:p.K1315E	exonic	ENSG00000178104	NA	nonsynonymous SNV	ENSG00000178104:ENST00000369354:exon27:c.A4075G:p.K1359E,ENSG00000178104:ENST00000369356:exon27:c.A4075G:p.K1359E,ENSG00000178104:ENST00000313382:exon30:c.A3943G:p.K1315E,ENSG00000178104:ENST00000369359:exon30:c.A4483G:p.K1495E,ENSG00000178104:ENST00000530740:exon30:c.A4483G:p.K1495E	NA	NA	1q21.1	NA	NA	NA	NA	rs1747958	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	0.92	T	0.229	B	0.053	B	.	.	0.788	N	0.695	N	4.9	T	-0.976	T	0.001	T	0.065	0.734	7.897	-0.444	0.068	0.385	7.421	0.733504	NA	0.51	NA	NA	NA	0.5	NA	6.8333334
969	11	31128494	31128494	A	G	intergenic	DCDC5,DCDC1	dist=114261;dist=155677	NA	NA	exonic	ENSG00000170959	NA	nonsynonymous SNV	ENSG00000170959:ENST00000597505:exon11:c.T1601C:p.I534T	Score=385;Name=lod=49	NA	11p13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000008719	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.752493	1.752493	0.36	NA	NA	NA	NA	NA	6.8333247
969	11	6790106	6790106	T	C	exonic	OR2AG2	NA	nonsynonymous SNV	OR2AG2:NM_001004490:exon1:c.A83G:p.Y28C	exonic	ENSG00000188124	NA	nonsynonymous SNV	ENSG00000188124:ENST00000338569:exon1:c.A83G:p.Y28C	Score=309;Name=lod=24	NA	11p15.4	NA	NA	NA	NA	rs7102536	0.87	0.87	0.869	0.877196	0.8141	0.9286	0.8415	0.9002	0.8834	0.82	0.93	0.84	0.9	0.8537	0.93	0.32	T	0.0	B	0.0	B	0.001	N	1.000	P	0.55	N	4.01	T	-1.036	T	0.000	T	0.064	-0.648	1.145	3.36	0.749	0.488	5.400	-0.648419	NA	0.52	0.832402	0.901636	NA	0.906	NA	6.8331314
969	6	29080349	29080349	A	G	exonic	OR2J3	NA	nonsynonymous SNV	OR2J3:NM_001005216:exon1:c.A682G:p.I228V	exonic	ENSG00000204701	NA	nonsynonymous SNV	ENSG00000204701:ENST00000377169:exon1:c.A682G:p.I228V	NA	NA	6p22.1	NA	NA	NA	NA	rs3130764	0.75	0.75	0.751	0.751597	0.829	0.6071	0.7478	0.7716	0.7965	0.85	0.59	0.74	0.81	0.8204	0.85	1	T	.	.	.	.	.	.	1.000	P	.	.	8.98	T	-1.107	T	0.000	T	0.044	-3.285	0.001	2.78	0.502	-1.126	7.733	-3.285412	NA	1	0.852061	0.80945	NA	0.783	NA	6.8318724
969	8	8234714	8234714	C	T	exonic	SGK223	NA	nonsynonymous SNV	SGK223:NM_001080826:exon2:c.G1205A:p.R402Q	exonic	ENSG00000182319	NA	nonsynonymous SNV	ENSG00000182319:ENST00000330777:exon2:c.G1205A:p.R402Q,ENSG00000182319:ENST00000520004:exon3:c.G1205A:p.R402Q	NA	NA	8p23.1	NA	NA	NA	NA	rs3896980	0.44	0.44	0.42	0.455871	0.3052	0.6409	0.4366	0.3903	0.5225	0.29	0.69	0.4	0.41	0.3924	0.69	0.21	T	0.716	P	0.042	B	0.129	N	1.000	P	1.79	L	0.39	T	-0.923	T	0.000	T	0.173	0.936	8.815	1.03	0.644	0.001	0.884	0.936192	NA	0.33	0.304369	0.357743	NA	0.377	NA	6.8313644
969	16	31336888	31336888	C	T	exonic	ITGAM	NA	nonsynonymous SNV	ITGAM:NM_000632:exon21:c.C2573T:p.A858V,ITGAM:NM_001145808:exon21:c.C2576T:p.A859V	exonic	ENSG00000169896	NA	nonsynonymous SNV	ENSG00000169896:ENST00000287497:exon21:c.C2573T:p.A858V,ENSG00000169896:ENST00000544665:exon21:c.C2576T:p.A859V	NA	NA	16p11.2	NA	NA	NA	NA	rs1143683	0.12	0.12	0.128	0.16254	0.1809	0.0278	0.1311	0.1906	0.2669	0.18	0.0017	0.13	0.16	0.1627	0.18	0.35	T	0.006	B	0.015	B	.	.	1.000	P	0.57	N	0.62	T	-1.026	T	0.000	T	0.013	0.913	8.716	-1.51	0.007	-0.193	10.869	0.913114	NA	0.16	0.158829	0.17714	NA	0.123	NA	6.8309044
969	5	147480027	147480027	G	A	exonic	SPINK5	NA	nonsynonymous SNV	SPINK5:NM_001127698:exon13:c.G1103A:p.S368N,SPINK5:NM_001127699:exon13:c.G1103A:p.S368N,SPINK5:NM_006846:exon13:c.G1103A:p.S368N	exonic	ENSG00000133710	NA	nonsynonymous SNV	ENSG00000133710:ENST00000256084:exon13:c.G1103A:p.S368N,ENSG00000133710:ENST00000359874:exon13:c.G1103A:p.S368N,ENSG00000133710:ENST00000398454:exon13:c.G1103A:p.S368N,ENSG00000133710:ENST00000508733:exon13:c.G1046A:p.S349N	NA	NA	5q32	NA	NA	NA	NA	rs2303063	0.43	0.43	0.383	0.43151	0.4861	0.4831	0.611	0.1982	0.5102	0.46	0.46	0.59	0.23	0.5057	0.59	0.53	T	0.007	B	0.018	B	0.209	N	1.000	P	0.67	N	3.16	T	-1.009	T	0.000	T	0.094	-0.393	2.157	2.35	0.432	0.036	5.960	-0.39314	NA	0.45	0.511012	0.251177	NA	0.362	NA	6.8305214
969	19	35434238	35434238	A	G	exonic	ZNF30	NA	nonsynonymous SNV	ZNF30:NM_001099437:exon5:c.A371G:p.Q124R,ZNF30:NM_001099438:exon5:c.A371G:p.Q124R,ZNF30:NM_194325:exon5:c.A368G:p.Q123R	exonic	ENSG00000168661	NA	nonsynonymous SNV	ENSG00000168661:ENST00000303586:exon5:c.A371G:p.Q124R,ENSG00000168661:ENST00000439785:exon5:c.A371G:p.Q124R,ENSG00000168661:ENST00000601142:exon5:c.A368G:p.Q123R,ENSG00000168661:ENST00000426813:exon6:c.A125G:p.Q42R	NA	NA	19q13.11	NA	NA	NA	NA	rs1811	0.57	0.57	0.566	0.586062	0.5119	0.6032	0.3761	0.6997	0.6401	0.51	0.62	0.44	0.69	0.5174	0.69	0.15	T	0.0	B	0.014	B	.	.	1.000	P	0	N	1.64	T	-1.000	T	0.000	T	0.148	0.267	5.442	-0.504	-0.594	-3.046	6.151	0.266597	NA	0.12	0.474228	0.657067	NA	0.493	NA	6.8298054
969	20	54961463	54961463	T	C	exonic	AURKA	NA	nonsynonymous SNV	AURKA:NM_003600:exon3:c.A169G:p.I57V,AURKA:NM_198435:exon3:c.A169G:p.I57V,AURKA:NM_198437:exon3:c.A169G:p.I57V,AURKA:NM_198434:exon4:c.A169G:p.I57V,AURKA:NM_198436:exon4:c.A169G:p.I57V,AURKA:NM_198433:exon5:c.A169G:p.I57V	exonic	ENSG00000087586	NA	nonsynonymous SNV	ENSG00000087586:ENST00000347343:exon3:c.A169G:p.I57V,ENSG00000087586:ENST00000395907:exon3:c.A169G:p.I57V,ENSG00000087586:ENST00000395913:exon3:c.A169G:p.I57V,ENSG00000087586:ENST00000395915:exon3:c.A169G:p.I57V,ENSG00000087586:ENST00000312783:exon4:c.A169G:p.I57V,ENSG00000087586:ENST00000371356:exon4:c.A169G:p.I57V,ENSG00000087586:ENST00000395911:exon4:c.A169G:p.I57V,ENSG00000087586:ENST00000395914:exon4:c.A169G:p.I57V,ENSG00000087586:ENST00000422322:exon4:c.A169G:p.I57V,ENSG00000087586:ENST00000441357:exon4:c.A169G:p.I57V,ENSG00000087586:ENST00000395909:exon5:c.A169G:p.I57V,ENSG00000087586:ENST00000420474:exon5:c.A169G:p.I57V,ENSG00000087586:ENST00000451915:exon5:c.A169G:p.I57V,ENSG00000087586:ENST00000456249:exon5:c.A169G:p.I57V	Score=235;Name=lod=12	NA	20q13.2	NA	Name=MafF_(M8194),MafK_(SC-477),MafK_(ab50322)	NA	NA	rs1047972	0.84	0.84	0.81	0.84984	0.8181	0.877	0.8948	0.8298	0.8497	0.81	0.86	0.9	0.84	0.8482	0.9	1	T	0.0	B	0.001	B	0.023	N	1.000	P	.	.	2.95	T	-0.937	T	0.000	T	0.172	-2.049	0.006	1.97	-0.000	-0.463	6.629	-2.049068	NA	1	0.837558	0.838175	NA	0.877	NA	6.8294754
969	2	160901517	160901517	A	G	exonic	PLA2R1	NA	synonymous SNV	PLA2R1:NM_001007267:exon2:c.T261C:p.S87S,PLA2R1:NM_001195641:exon2:c.T261C:p.S87S,PLA2R1:NM_007366:exon2:c.T261C:p.S87S	exonic	ENSG00000153246	NA	synonymous SNV	ENSG00000153246:ENST00000283243:exon2:c.T261C:p.S87S,ENSG00000153246:ENST00000392771:exon2:c.T261C:p.S87S	NA	NA	2q24.2	Score=774;Name=V$AHRARNT_02	Name=YY1,CTCF,ELF1_(SC-631)	Name=3	NA	rs4665143	0.51	0.51	0.454	0.457268	0.6292	0.5992	0.6614	0.1278	0.4346	0.63	0.58	0.61	0.15	0.5737	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.11419	NA	NA	0.634302	0.21902	NA	0.362	NA	6.8294646
969	14	51237701	51237701	A	G	exonic	NIN	NA	synonymous SNV	NIN:NM_016350:exon11:c.T1128C:p.V376V,NIN:NM_020921:exon11:c.T1128C:p.V376V,NIN:NM_182944:exon11:c.T1128C:p.V376V,NIN:NM_182946:exon11:c.T1128C:p.V376V	exonic	ENSG00000100503	NA	synonymous SNV	ENSG00000100503:ENST00000530997:exon9:c.T1128C:p.V376V,ENSG00000100503:ENST00000382043:exon10:c.T1128C:p.V376V,ENSG00000100503:ENST00000245441:exon11:c.T1128C:p.V376V,ENSG00000100503:ENST00000324330:exon11:c.T1128C:p.V376V,ENSG00000100503:ENST00000382041:exon11:c.T1128C:p.V376V,ENSG00000100503:ENST00000389868:exon11:c.T1128C:p.V376V,ENSG00000100503:ENST00000453196:exon11:c.T1128C:p.V376V,ENSG00000100503:ENST00000453401:exon11:c.T1014C:p.V338V,ENSG00000100503:ENST00000476352:exon11:c.T1128C:p.V376V	Score=566;Name=lod=267	NA	14q22.1	NA	NA	Name=4	NA	rs17793018	0.6	0.6	0.552	0.577276	0.6083	0.8403	0.6182	0.2595	0.6748	0.63	0.85	0.62	0.25	0.6207	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.457345	1.457345	NA	0.60907	0.296868	NA	0.551	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117795.2;CLNDSDB=.;CLNDSDBID=.	6.8285966
969	6	32797297	32797297	T	C	exonic	TAP2	NA	synonymous SNV	TAP2:NM_018833:exon11:c.A1812G:p.G604G	exonic	ENSG00000204267,ENSG00000250264	NA	synonymous SNV	ENSG00000204267:ENST00000374897:exon11:c.A1812G:p.G604G,ENSG00000204267:ENST00000374899:exon11:c.A1812G:p.G604G,ENSG00000250264:ENST00000452392:exon11:c.A1812G:p.G604G	NA	NA	6p21.32	NA	Name=ZNF263	Name=3	NA	rs241441	0.26	0.26	0.255	0.299121	0.2783	0.3621	0.304	0.1551	0.4468	0.25	0.36	0.27	0.17	0.2978	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.512026	NA	NA	0.262674	0.184975	NA	0.188	NA	6.8278926
969	11	76372052	76372052	A	G	exonic	LRRC32	NA	synonymous SNV	LRRC32:NM_001128922:exon3:c.T585C:p.G195G,LRRC32:NM_005512:exon3:c.T585C:p.G195G	exonic	ENSG00000137507	NA	synonymous SNV	ENSG00000137507:ENST00000260061:exon3:c.T585C:p.G195G,ENSG00000137507:ENST00000404995:exon3:c.T585C:p.G195G,ENSG00000137507:ENST00000407242:exon3:c.T585C:p.G195G	Score=361;Name=lod=39	NA	11q13.5	Score=761;Name=V$PAX5_02	Name=HA-E2F1,ERalpha_a,c-Myc	NA	NA	rs3740779	0.59	0.59	0.612	0.625399	0.6064	0.6349	0.5692	0.6316	0.6667	0.6	0.56	0.58	0.62	0.6115	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.251427	NA	NA	0.621738	0.630227	NA	0.71	NA	6.8270286
969	2	231738168	231738168	G	A	exonic	ITM2C	NA	nonsynonymous SNV	ITM2C:NM_001012516:exon2:c.G157A:p.G53S,ITM2C:NM_030926:exon2:c.G157A:p.G53S	exonic	ENSG00000135916	NA	nonsynonymous SNV	ENSG00000135916:ENST00000326407:exon2:c.G157A:p.G53S,ENSG00000135916:ENST00000326427:exon2:c.G157A:p.G53S,ENSG00000135916:ENST00000457215:exon3:c.G157A:p.G53S	NA	NA	2q37.1	NA	NA	NA	NA	rs2289235	0.54	0.54	0.497	0.510583	0.503	0.8135	0.5303	0.233	0.5675	0.51	0.82	0.49	0.28	0.5206	0.82	1	T	0.001	B	0.001	B	0.287	N	1.000	P	-0.11	N	2.03	T	-0.974	T	0.000	T	0.301	-1.673	0.012	-2.61	-0.144	0.093	4.686	-1.673453	NA	0.82	0.482791	0.254653	NA	0.399	NA	6.8269424
969	19	9070225	9070225	G	C	exonic	MUC16	NA	nonsynonymous SNV	MUC16:NM_024690:exon3:c.C17221G:p.H5741D	exonic	ENSG00000181143	NA	nonsynonymous SNV	ENSG00000181143:ENST00000397910:exon3:c.C17221G:p.H5741D	NA	NA	19p13.2	NA	NA	NA	NA	rs1559172	0.81	0.81	0.798	0.813299	0.827	0.8512	0.866	0.7337	0.8303	0.83	0.88	0.86	0.69	0.8281	0.88	0	D	0.0	B	0.0	B	.	.	.	.	0	N	2.04	T	-1.065	T	0.000	T	0.057	-0.663	1.093	-0.66	-0.438	-1.248	4.313	-0.663347	NA	0.76	0.85139	0.764904	NA	0.775	NA	6.8268434
969	19	971949	971949	G	A	exonic	ARID3A	NA	nonsynonymous SNV	ARID3A:NM_005224:exon9:c.G1666A:p.G556S	exonic	ENSG00000116017	NA	nonsynonymous SNV	ENSG00000116017:ENST00000263620:exon9:c.G1666A:p.G556S	NA	NA	19p13.3	NA	NA	NA	NA	rs1051505	0.6	0.6	0.73	0.71865	0.8618	0.5694	0.6124	0.6989	0.8272	0.71	0.46	0.57	0.61	0.7812	0.86	0.33	T	0.0	B	0.0	B	0.513	N	1.000	P	1.1	L	1.17	T	-0.998	T	0.000	T	0.039	0.772	8.079	-7.15	-0.954	0.089	3.792	0.772037	NA	0.41	0.864654	0.7608	NA	0.174	NA	6.8256794
969	10	73562744	73562744	G	A	exonic	CDH23	NA	synonymous SNV	CDH23:NM_001171933:exon7:c.G852A:p.A284A,CDH23:NM_001171934:exon7:c.G852A:p.A284A,CDH23:NM_022124:exon52:c.G7572A:p.A2524A	exonic	ENSG00000107736	NA	synonymous SNV	ENSG00000107736:ENST00000398788:exon7:c.G852A:p.A284A,ENSG00000107736:ENST00000224721:exon53:c.G7587A:p.A2529A	Score=393;Name=lod=53	NA	10q22.1	NA	NA	NA	NA	rs10823849	0.34	0.34	0.311	0.328474	0.2783	0.5298	0.3444	0.2307	0.2935	0.28	0.52	0.29	0.27	0.3019	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.224495	NA	NA	0.260953	0.223762	ID=COSM146956;OCCURENCE=1(stomach)	0.319	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000039270.1|RCV000124206.1;CLNDSDB=.|.;CLNDSDBID=.|.	6.8255136
969	2	101644855	101644855	G	A	exonic	TBC1D8	NA	synonymous SNV	TBC1D8:NM_001102426:exon13:c.C2217T:p.P739P	exonic	ENSG00000204634	NA	synonymous SNV	ENSG00000204634:ENST00000376840:exon13:c.C2217T:p.P739P,ENSG00000204634:ENST00000409318:exon13:c.C2262T:p.P754P	NA	NA	2q11.2	Score=746;Name=V$MYOGNF1_01	Name=Pol2	NA	NA	rs11683877	0.2	0.2	0.2	0.215256	0.2744	0.1667	0.2853	0.0356	0.3978	0.28	0.18	0.31	0.03	0.2778	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.39151	NA	NA	0.288985	0.076378	ID=COSM148916;OCCURENCE=1(stomach)	0.138	NA	6.8254816
970	19	9071763	9071763	T	A	exonic	MUC16	NA	nonsynonymous SNV	MUC16:NM_024690:exon3:c.A15683T:p.N5228I	exonic	ENSG00000181143	NA	nonsynonymous SNV	ENSG00000181143:ENST00000397910:exon3:c.A15683T:p.N5228I	NA	NA	19p13.2	NA	NA	NA	NA	rs10422567	0.82	0.82	0.811	0.81849	0.827	0.8512	0.8703	0.7549	0.8252	0.83	0.88	0.87	0.72	0.8296	0.88	0	D	0.0	B	0.0	B	.	.	.	.	0.345	N	4.24	T	-1.092	T	0.000	T	0.023	-0.24	2.842	0.647	-0.215	-3.190	1.508	-0.240313	NA	0.48	0.851736	0.784051	NA	0.79	NA	6.8249974
970	3	97607290	97607290	G	A	exonic	CRYBG3	NA	synonymous SNV	CRYBG3:NM_153605:exon9:c.G7395A:p.P2465P	exonic	ENSG00000080200	NA	synonymous SNV	ENSG00000080200:ENST00000182096:exon6:c.G1551A:p.P517P	Score=468;Name=lod=106	NA	3q11.2	Score=844;Name=V$GFI1_01	NA	NA	NA	rs13065340	0.22	0.22	0.182	0.204473	0.2833	0.1637	0.317	0.112	0.2106	0.29	0.14	0.33	0.12	0.2719	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.901243	NA	NA	0.286747	0.124589	ID=COSM149431;OCCURENCE=1(stomach)	0.246	NA	6.8247196
970	2	179462494	179462494	A	G	exonic	TTN	NA	synonymous SNV	TTN:NM_003319:exon122:c.T30120C:p.H10040H,TTN:NM_133432:exon123:c.T30495C:p.H10165H,TTN:NM_133437:exon123:c.T30696C:p.H10232H,TTN:NM_133378:exon243:c.T49611C:p.H16537H,TTN:NM_001256850:exon244:c.T52392C:p.H17464H,TTN:NM_001267550:exon294:c.T57315C:p.H19105H	exonic	ENSG00000155657	NA	synonymous SNV	ENSG00000155657:ENST00000460472:exon122:c.T30120C:p.H10040H,ENSG00000155657:ENST00000342175:exon123:c.T30696C:p.H10232H,ENSG00000155657:ENST00000359218:exon123:c.T30495C:p.H10165H,ENSG00000155657:ENST00000342992:exon243:c.T49611C:p.H16537H,ENSG00000155657:ENST00000591111:exon244:c.T52392C:p.H17464H,ENSG00000155657:ENST00000589042:exon294:c.T57315C:p.H19105H	Score=594;Name=lod=345	NA	2q31.2	NA	NA	NA	NA	rs35833641	0.15	0.15	0.129	0.126997	0.3072	0.0387	0.1124	0.0053	0.2076	0.32	0.04	0.15	0.01	0.2349	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.112931	NA	NA	0.300144	0.052526	NA	0.174	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=mult|single;CLNACC=RCV000040390.2|RCV000125830.1;CLNDSDB=.|.;CLNDSDBID=.|.	6.8244226
970	1	55524237	55524237	G	A	exonic	PCSK9	NA	nonsynonymous SNV	PCSK9:NM_174936:exon9:c.G1420A:p.V474I	exonic	ENSG00000169174	NA	nonsynonymous SNV	ENSG00000169174:ENST00000302118:exon9:c.G1420A:p.V474I	NA	NA	1p32.3	NA	NA	NA	NA	rs562556	0.85	0.85	0.865	0.86901	0.8211	0.9881	0.8948	0.7746	0.9049	0.81	0.97	0.86	0.78	0.8544	0.97	0.29	T	0.013	B	0.002	B	0.007	N	1.000	P	0.895	L	-0.52	T	-0.970	T	0.000	T	0.043	1.517	11.02	-8.95	-2.214	-0.834	3.846	1.517087	1.517087	NA	0.833488	0.787108	NA	0.826	NA	6.8243454
970	11	124310622	124310622	A	G	exonic	OR8B8	NA	synonymous SNV	OR8B8:NM_012378:exon1:c.T360C:p.Y120Y	exonic	ENSG00000197125	NA	synonymous SNV	ENSG00000197125:ENST00000328064:exon1:c.T360C:p.Y120Y	Score=472;Name=lod=110	NA	11q24.2	NA	Name=MafK_(ab50322),eGFP-JunD	NA	NA	rs4296049	0.29	0.29	0.231	0.248403	0.2644	0.5317	0.33	0.0303	0.1769	0.25	0.54	0.35	0.04	0.2875	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.904098	NA	NA	0.290649	0.068151	NA	0.123	NA	6.8241176
970	2	179440029	179440029	G	A	exonic	TTN	NA	synonymous SNV	TTN:NM_003319:exon154:c.C43635T:p.S14545S,TTN:NM_133432:exon155:c.C44010T:p.S14670S,TTN:NM_133437:exon155:c.C44211T:p.S14737S,TTN:NM_133378:exon275:c.C63126T:p.S21042S,TTN:NM_001256850:exon276:c.C65907T:p.S21969S,TTN:NM_001267550:exon326:c.C70830T:p.S23610S	exonic	ENSG00000155657	NA	synonymous SNV	ENSG00000155657:ENST00000460472:exon154:c.C43635T:p.S14545S,ENSG00000155657:ENST00000342175:exon155:c.C44211T:p.S14737S,ENSG00000155657:ENST00000359218:exon155:c.C44010T:p.S14670S,ENSG00000155657:ENST00000342992:exon275:c.C63126T:p.S21042S,ENSG00000155657:ENST00000591111:exon276:c.C65907T:p.S21969S,ENSG00000155657:ENST00000589042:exon326:c.C70830T:p.S23610S	Score=514;Name=lod=164	NA	2q31.2	NA	NA	NA	NA	rs12464787	0.16	0.16	0.15	0.146565	0.3052	0.0417	0.1167	0.0779	0.2055	0.32	0.04	0.16	0.07	0.24	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.08244	NA	NA	0.297474	0.117589	NA	0.196	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=mult|single;CLNACC=RCV000040563.2|RCV000125877.1;CLNDSDB=.|.;CLNDSDBID=.|.	6.8239926
970	12	110011229	110011229	G	T	exonic	MMAB	NA	synonymous SNV	MMAB:NM_052845:exon1:c.C57A:p.R19R	exonic	ENSG00000139428	NA	synonymous SNV	ENSG00000139428:ENST00000420167:exon1:c.C57A:p.R19R,ENSG00000139428:ENST00000503497:exon1:c.C57A:p.R19R,ENSG00000139428:ENST00000537496:exon1:c.C57A:p.R19R,ENSG00000139428:ENST00000540016:exon1:c.C57A:p.R19R,ENSG00000139428:ENST00000541763:exon1:c.C57A:p.R19R,ENSG00000139428:ENST00000544051:exon1:c.C57A:p.R19R,ENSG00000139428:ENST00000545712:exon1:c.C57A:p.R19R	NA	NA	12q24.11	NA	Name=YY1,NANOG_(SC-33759),Pol2-4H8,Sin3Ak-20,HEY1,ZEB1_(SC-25388),c-Myc,CCNT2,TBP,TAF1,E2F6_(H-50),ETS1,HMGN3,POU2F2,Pol2(phosphoS2),Pol2,E2F6,YY1_(C-20),ELF1_(SC-631),Oct-2	Name=114	NA	rs10774774	0.29	0.29	0.279	0.284944	0.2853	0.1607	0.2939	0.438	0.1994	0.28	0.15	0.31	0.45	0.2904	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.304693	NA	NA	0.266993	0.391701	NA	NA	NA	6.8239736
970	15	42570718	42570718	A	G	exonic	GANC	NA	nonsynonymous SNV	GANC:NM_198141:exon3:c.A131G:p.Q44R	exonic	ENSG00000214013	NA	nonsynonymous SNV	ENSG00000214013:ENST00000318010:exon3:c.A131G:p.Q44R,ENSG00000214013:ENST00000440615:exon3:c.A131G:p.Q44R,ENSG00000214013:ENST00000562170:exon4:c.A131G:p.Q44R,ENSG00000214013:ENST00000562859:exon4:c.A131G:p.Q44R,ENSG00000214013:ENST00000566442:exon4:c.A131G:p.Q44R	Score=346;Name=lod=34	NA	15q15.1	NA	NA	NA	NA	rs8024732	0.73	0.73	0.707	0.644369	0.8668	0.8423	0.6254	0.3396	0.637	0.88	0.87	0.68	0.38	0.7816	0.88	1	T	0.0	B	0.001	B	0.024	N	0.766	P	-0.64	N	2.32	T	-0.981	T	0.000	T	0.149	-1.652	0.012	-2.85	-0.763	-0.262	10.972	-1.65202	NA	0.78	0.861363	0.436904	NA	0.703	NA	6.8235704
970	4	155219318	155219318	C	T	exonic	DCHS2	NA	nonsynonymous SNV	DCHS2:NM_017639:exon18:c.G4783A:p.E1595K	exonic	ENSG00000197410	NA	nonsynonymous SNV	ENSG00000197410:ENST00000357232:exon18:c.G4783A:p.E1595K	NA	NA	4q31.3	NA	NA	NA	NA	rs28561984	NA	NA	0.09	0.133786	0.172	0.1528	0.1037	0.0295	0.2372	NA	NA	NA	NA	0.1599	0.18	0.83	T	0.003	B	0.001	B	0.817	N	1.000	N	0.625	N	0.13	T	-1.096	T	0.000	T	0.043	1.061	9.333	0.139	-0.142	0.438	3.095	1.060925	NA	0.77	0.178023	0.066273	NA	0.087	NA	6.8234104
970	6	31506801	31506801	G	A	ncRNA_intronic	ATP6V1G2-DDX39B	NA	NA	NA	exonic	ENSG00000198563	NA	synonymous SNV	ENSG00000198563:ENST00000449074:exon4:c.C375T:p.N125N	NA	NA	6p21.33	NA	Name=USF1_(SC-8983)	Name=10	NA	rs2523512	0.17	0.17	0.175	0.171126	0.16	0.1647	0.1556	0.1437	0.2372	0.17	0.16	0.18	0.16	0.1841	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.34353	NA	NA	NA	NA	NA	0.203	NA	6.8225666
970	19	53612745	53612745	T	C	exonic	ZNF415	NA	nonsynonymous SNV	ZNF415:NM_001136038:exon4:c.A553G:p.I185V,ZNF415:NM_001164309:exon4:c.A553G:p.I185V,ZNF415:NM_018355:exon4:c.A553G:p.I185V	exonic	ENSG00000170954	NA	nonsynonymous SNV	ENSG00000170954:ENST00000243643:exon4:c.A553G:p.I185V,ENSG00000170954:ENST00000500065:exon4:c.A553G:p.I185V,ENSG00000170954:ENST00000421033:exon5:c.A589G:p.I197V,ENSG00000170954:ENST00000440291:exon5:c.A514G:p.I172V,ENSG00000170954:ENST00000448501:exon6:c.A697G:p.I233V,ENSG00000170954:ENST00000455735:exon7:c.A697G:p.I233V	NA	NA	19q13.42	NA	NA	NA	NA	rs1133327	0.55	0.55	0.526	0.544928	0.497	0.6131	0.647	0.4856	0.5317	0.5	0.6	0.65	0.51	0.5247	0.65	0.27	T	0.007	B	0.004	B	.	.	1.000	P	-0.97	N	3.26	T	-1.062	T	0.000	T	0.045	-0.956	0.331	1.68	0.075	-1.787	5.293	-0.95623	NA	0.43	0.48907	0.502951	NA	0.543	NA	6.8225634
970	7	99747130	99747130	G	A	exonic	LAMTOR4	NA	synonymous SNV	LAMTOR4:NM_001008395:exon2:c.G12A:p.A4A	exonic	ENSG00000188186	NA	synonymous SNV	ENSG00000188186:ENST00000341942:exon2:c.G12A:p.A4A,ENSG00000188186:ENST00000441173:exon2:c.G12A:p.A4A	Score=502;Name=lod=146	NA	7q22.1	NA	Name=ZEB1_(SC-25388),Pol2	Name=14	NA	rs12878	0.58	0.58	0.604	0.597045	0.6312	0.6815	0.4899	0.5303	0.6411	0.63	0.65	0.5	0.48	0.5952	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.019363	2.019363	NA	0.618256	0.573763	NA	0.558	NA	6.8220106
970	7	157985149	157985149	C	G	exonic	PTPRN2	NA	nonsynonymous SNV	PTPRN2:NM_130842:exon4:c.G368C:p.S123T,PTPRN2:NM_002847:exon5:c.G419C:p.S140T,PTPRN2:NM_130843:exon5:c.G419C:p.S140T	exonic	ENSG00000155093	NA	nonsynonymous SNV	ENSG00000155093:ENST00000389416:exon4:c.G368C:p.S123T,ENSG00000155093:ENST00000409483:exon4:c.G305C:p.S102T,ENSG00000155093:ENST00000389413:exon5:c.G419C:p.S140T,ENSG00000155093:ENST00000389418:exon5:c.G419C:p.S140T,ENSG00000155093:ENST00000404321:exon5:c.G488C:p.S163T	NA	NA	7q36.3	NA	NA	NA	NA	rs3800855	0.23	0.23	0.217	0.244409	0.169	0.1944	0.1945	0.3752	0.2321	0.17	0.22	0.18	0.38	0.1937	0.38	0.62	T	0.001	B	0.004	B	.	.	1.000	P	0.895	L	3.97	T	-0.943	T	0.000	T	0.072	0.197	5.064	1.36	0.488	-0.673	3.804	0.197429	NA	0.15	0.148837	0.342261	NA	0.203	NA	6.8217964
970	6	17831419	17831419	G	A	exonic	KIF13A	NA	synonymous SNV	KIF13A:NM_001105566:exon13:c.C1314T:p.S438S,KIF13A:NM_001105567:exon13:c.C1314T:p.S438S,KIF13A:NM_001105568:exon13:c.C1314T:p.S438S,KIF13A:NM_022113:exon13:c.C1314T:p.S438S	exonic	ENSG00000137177	NA	synonymous SNV	ENSG00000137177:ENST00000259711:exon13:c.C1314T:p.S438S,ENSG00000137177:ENST00000378814:exon13:c.C1314T:p.S438S,ENSG00000137177:ENST00000378816:exon13:c.C1314T:p.S438S,ENSG00000137177:ENST00000378826:exon13:c.C1314T:p.S438S,ENSG00000137177:ENST00000378843:exon13:c.C1314T:p.S438S	NA	NA	6p22.3	Score=703;Name=V$BRACH_01	Name=c-Fos,GATA-2	NA	NA	rs2277080	0.21	0.21	0.21	0.239417	0.2803	0.2004	0.1758	0.1566	0.3947	0.28	0.15	0.19	0.16	0.274	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.794871	NA	NA	0.290577	0.169826	NA	0.283	NA	6.8217896
970	1	15792426	15792426	C	G	intronic	CELA2A	NA	NA	NA	intronic	ENSG00000142615	NA	NA	NA	NA	Name=Erectile dysfunction and prostate cancer treatment	1p36.21	NA	Name=USF-1,PU.1,CEBPB,USF1_(SC-8983)	Name=8	NA	rs2901964	0.29	0.29	0.32	0.307308	0.1799	0.0714	0.2133	0.7186	0.1922	0.18	0.08	0.27	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.07303	NA	NA	NA	NA	NA	0.268	NA	6.8201
970	11	86267678	86267678	G	A	exonic	ME3	NA	synonymous SNV	ME3:NM_001014811:exon3:c.C384T:p.D128D,ME3:NM_001161586:exon4:c.C384T:p.D128D,ME3:NM_006680:exon4:c.C384T:p.D128D	exonic	ENSG00000151376	NA	synonymous SNV	ENSG00000151376:ENST00000323418:exon2:c.C198T:p.D66D,ENSG00000151376:ENST00000393324:exon3:c.C384T:p.D128D,ENSG00000151376:ENST00000359636:exon4:c.C384T:p.D128D,ENSG00000151376:ENST00000524826:exon4:c.C384T:p.D128D,ENSG00000151376:ENST00000526504:exon4:c.C384T:p.D128D,ENSG00000151376:ENST00000530335:exon4:c.C384T:p.D128D,ENSG00000151376:ENST00000543262:exon4:c.C384T:p.D128D	Score=531;Name=lod=192	NA	11q14.2	Score=887;Name=V$ATF6_01	NA	NA	NA	rs4943943	0.16	0.16	0.156	0.148562	0.2873	0.0496	0.1974	0.0416	0.2178	0.3	0.05	0.21	0.04	0.2479	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.564607	NA	NA	0.313096	0.086966	NA	0.283	NA	6.8183706
970	1	59148118	59148118	A	T	exonic	MYSM1	NA	nonsynonymous SNV	MYSM1:NM_001085487:exon8:c.T598A:p.C200S	exonic	ENSG00000162601	NA	nonsynonymous SNV	ENSG00000162601:ENST00000472487:exon8:c.T598A:p.C200S	NA	NA	1p32.1	NA	NA	NA	NA	rs17118103	0.14	0.14	0.115	0.155751	0.1859	0.2143	0.1527	0.0076	0.2669	0.19	0.19	0.14	0.01	0.1787	0.19	0.78	T	0.0	B	0.0	B	0.577	N	1.000	P	0.345	N	2.12	T	-0.987	T	0.000	T	0.016	0.565	7.056	0.157	0.099	-0.148	1.230	0.565341	NA	NA	0.150536	0.031051	ID=COSM146528;OCCURENCE=1(stomach)	0.065	NA	6.8181974
970	20	33703607	33703607	C	T	exonic	EDEM2	NA	nonsynonymous SNV	EDEM2:NM_001145025:exon10:c.G1255A:p.A419T,EDEM2:NM_018217:exon11:c.G1366A:p.A456T	exonic	ENSG00000088298	NA	nonsynonymous SNV	ENSG00000088298:ENST00000542871:exon9:c.G538A:p.A180T,ENSG00000088298:ENST00000374491:exon10:c.G1255A:p.A419T,ENSG00000088298:ENST00000541621:exon10:c.G703A:p.A235T,ENSG00000088298:ENST00000374492:exon11:c.G1366A:p.A456T	NA	NA	20q11.22	NA	NA	NA	NA	rs3746429	0.12	0.12	0.112	0.113818	0.1799	0.0952	0.1052	0.0045	0.2188	0.19	0.11	0.11	0.01	0.1585	0.19	0.56	T	0.002	B	0.003	B	0.086	N	1.000	P	-0.345	N	2.01	T	-1.045	T	0.000	T	0.055	-0.755	0.803	-0.269	-0.384	0.203	2.710	-0.754627	NA	0.47	0.17686	0.033818	NA	0.181	NA	6.8180734
970	16	9943666	9943666	C	T	exonic	GRIN2A	NA	synonymous SNV	GRIN2A:NM_001134407:exon5:c.G1275A:p.L425L,GRIN2A:NM_001134408:exon5:c.G1275A:p.L425L,GRIN2A:NM_000833:exon6:c.G1275A:p.L425L	exonic	ENSG00000183454	NA	synonymous SNV	ENSG00000183454:ENST00000396575:exon4:c.G1275A:p.L425L,ENSG00000183454:ENST00000535259:exon4:c.G804A:p.L268L,ENSG00000183454:ENST00000562109:exon4:c.G1275A:p.L425L,ENSG00000183454:ENST00000330684:exon5:c.G1275A:p.L425L,ENSG00000183454:ENST00000404927:exon5:c.G1275A:p.L425L,ENSG00000183454:ENST00000396573:exon6:c.G1275A:p.L425L	Score=514;Name=lod=164	NA	16p13.2	NA	NA	NA	NA	rs2229193	0.22	0.22	0.212	0.225839	0.2992	0.0754	0.2089	0.2988	0.2188	0.29	0.06	0.25	0.26	0.2542	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.405173	1.405173	NA	0.295698	0.298134	NA	0.304	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117179.2;CLNDSDB=.;CLNDSDBID=.	6.8175686
970	21	43510514	43510514	C	G	exonic	UMODL1	NA	synonymous SNV	UMODL1:NM_001004416:exon6:c.C897G:p.A299A,UMODL1:NM_001199527:exon6:c.C681G:p.A227A,UMODL1:NM_001199528:exon6:c.C681G:p.A227A,UMODL1:NM_173568:exon6:c.C897G:p.A299A	exonic	ENSG00000177398	NA	synonymous SNV	ENSG00000177398:ENST00000400424:exon6:c.C681G:p.A227A,ENSG00000177398:ENST00000400427:exon6:c.C681G:p.A227A,ENSG00000177398:ENST00000408910:exon6:c.C897G:p.A299A,ENSG00000177398:ENST00000408989:exon6:c.C897G:p.A299A	NA	NA	21q22.3	NA	NA	NA	NA	rs2839464	0.26	0.26	0.278	0.285343	0.2833	0.1022	0.2046	0.4576	0.3006	0.26	0.11	0.23	0.46	0.2741	0.46	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.910	T	0.000	T	.	-0.412	2.076	-2.29	-0.242	-0.303	0.645	-0.411831	NA	0.95	0.291845	0.429631	NA	0.152	NA	6.8174216
970	21	43896143	43896143	C	T	exonic	RSPH1	NA	nonsynonymous SNV	RSPH1:NM_080860:exon8:c.G742A:p.G248R	exonic	ENSG00000160188	NA	nonsynonymous SNV	ENSG00000160188:ENST00000398352:exon7:c.G628A:p.G210R,ENSG00000160188:ENST00000291536:exon8:c.G742A:p.G248R	NA	NA	21q22.3	NA	NA	NA	NA	rs117385282	0.09	0.09	0.078	0.0838658	0.171	0.0109	0.1254	0.0076	0.1431	0.17	0.01	0.14	0.01	0.1549	0.19	0.57	T	0.003	B	0.001	B	0.213	N	1.000	P	0.69	N	0.29	T	-1.069	T	0.000	T	0.03	-0.446	1.93	-0.712	-0.152	-0.695	2.818	-0.446146	NA	0.5	0.191512	0.036087	ID=COSM149236;OCCURENCE=1(stomach)	0.08	NA	6.8159214
970	15	65553246	65553246	C	T	exonic	PARP16	NA	synonymous SNV	PARP16:NM_017851:exon5:c.G810A:p.V270V	exonic	ENSG00000138617	NA	synonymous SNV	ENSG00000138617:ENST00000444347:exon3:c.G465A:p.V155V,ENSG00000138617:ENST00000261888:exon5:c.G810A:p.V270V	Score=616;Name=lod=424	NA	15q22.31	Score=756;Name=V$STAT1_01	NA	NA	NA	rs2304896	0.26	0.26	0.251	0.230631	0.2714	0.125	0.4049	0.2572	0.138	0.29	0.15	0.34	0.27	0.2816	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.247667	1.247667	NA	0.298558	0.260109	NA	0.319	NA	6.8151086
971	11	5537045	5537045	T	G	exonic	UBQLNL	NA	synonymous SNV	UBQLNL:NM_145053:exon1:c.A627C:p.P209P	exonic	ENSG00000175518	NA	synonymous SNV	ENSG00000175518:ENST00000380184:exon1:c.A627C:p.P209P	Score=493;Name=lod=134	NA	11p15.4	Score=927;Name=V$HSF2_01	NA	NA	NA	rs872751	0.34	0.34	0.314	0.321086	0.2644	0.375	0.3487	0.3472	0.2689	0.28	0.41	0.31	0.37	0.3133	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.172276	NA	NA	0.275076	0.337119	NA	0.304	NA	6.8138906
971	6	155597147	155597147	C	T	exonic	CLDN20	NA	synonymous SNV	CLDN20:NM_001001346:exon2:c.C294T:p.S98S	exonic	ENSG00000171217	NA	synonymous SNV	ENSG00000171217:ENST00000367165:exon2:c.C294T:p.S98S	NA	NA	6q25.3	Score=835;Name=V$OCT1_Q6	NA	Name=39	NA	rs1555774	0.4	0.4	0.378	0.397963	0.2535	0.6528	0.5159	0.2572	0.3906	0.26	0.67	0.46	0.24	0.333	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.675497	NA	NA	0.266279	0.27054	NA	0.283	NA	6.8138876
971	12	48920073	48920073	G	A	exonic	OR8S1	NA	nonsynonymous SNV	OR8S1:NM_001005203:exon1:c.G659A:p.R220H	exonic	ENSG00000197376	NA	nonsynonymous SNV	ENSG00000197376:ENST00000310194:exon1:c.G659A:p.R220H	NA	NA	12q13.11	NA	NA	NA	NA	rs61941963	0.09	0.09	0.095	0.0692891	0.2018	0.0288	0.1066	0.0106	0.0276	0.19	0.03	0.1	0.02	0.1232	0.2	0.1	T	0.052	B	0.052	B	0.725	N	1.000	P	0.71	N	8.72	T	-1.047	T	0.000	T	0.077	-0.998	0.263	-0.583	-0.298	-0.918	0.179	-0.998124	NA	0.59	0.195116	0.041761	NA	0.094	NA	6.8132174
971	9	304769	304769	G	A	intronic	DOCK8	NA	NA	NA	intronic	ENSG00000107099	NA	NA	NA	NA	NA	9p24.3	Score=899;Name=V$TGIF_01	Name=Pol2,FOXA1_(C-20),STAT3	Name=38	NA	rs13292474	0.09	0.09	0.09	0.0952476	0.1869	0.0099	0.1009	0.031	0.1718	0.18	NA	0.09	0.05	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.319595	NA	NA	NA	NA	NA	0.109	NA	6.8131
971	4	47560002	47560002	C	A	exonic	ATP10D	NA	nonsynonymous SNV	ATP10D:NM_020453:exon12:c.C2146A:p.P716T	exonic	ENSG00000145246	NA	nonsynonymous SNV	ENSG00000145246:ENST00000273859:exon12:c.C2146A:p.P716T	NA	NA	4p12	NA	NA	NA	NA	rs34208443	0.1	0.1	0.089	0.0772764	0.1909	0.0079	0.0879	0.0272	0.092	0.2	0.01	0.12	0.03	0.1412	0.2	0.68	T	0.019	B	0.016	B	0.210	N	1.000	P	0.755	N	1.16	T	-1.018	T	0.000	T	0.048	0.641	7.444	0.389	0.374	-0.414	0.865	0.641307	NA	0.3	0.18907	0.051067	NA	0.051	NA	6.8121634
971	2	37406644	37406644	A	G	exonic	SULT6B1	NA	synonymous SNV	SULT6B1:NM_001032377:exon4:c.T372C:p.Y124Y	exonic	ENSG00000138068	NA	synonymous SNV	ENSG00000138068:ENST00000260637:exon4:c.T372C:p.Y124Y,ENSG00000138068:ENST00000535679:exon4:c.T486C:p.Y162Y,ENSG00000138068:ENST00000407963:exon5:c.T372C:p.Y124Y	Score=522;Name=lod=176	NA	2p22.2	Score=791;Name=V$BACH1_01	NA	NA	NA	rs10182091	0.41	0.41	0.393	0.42492	0.2565	0.8006	0.4207	0.2322	0.4744	0.27	0.79	0.38	0.21	0.3481	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.421387	NA	NA	0.250814	0.249887	NA	0.413	NA	6.8112526
971	1	153004853	153004853	C	T	exonic	SPRR1B	NA	nonsynonymous SNV	SPRR1B:NM_003125:exon2:c.C32T:p.T11I	exonic	ENSG00000169469	NA	nonsynonymous SNV	ENSG00000169469:ENST00000392661:exon1:c.C32T:p.T11I,ENSG00000169469:ENST00000307098:exon2:c.C32T:p.T11I	NA	NA	1q21.3	NA	Name=PAX5-N19	NA	NA	rs3795382	0.52	0.52	0.48	0.49401	0.5099	0.5913	0.4251	0.4402	0.499	0.51	0.62	0.46	0.46	0.5025	0.62	0.37	T	0.0	B	0.001	B	.	.	1.000	P	.	.	2.62	T	-0.911	T	0.007	T	0.107	-0.558	1.477	-0.059	-0.338	-0.240	8.066	-0.558376	NA	0.55	0.510698	0.46936	ID=COSM1180658;OCCURENCE=1(upper_aerodigestive_tract)	0.449	NA	6.8102354
971	1	209811886	209811886	T	G	exonic	LAMB3	NA	synonymous SNV	LAMB3:NM_001017402:exon3:c.A291C:p.S97S,LAMB3:NM_000228:exon4:c.A291C:p.S97S,LAMB3:NM_001127641:exon4:c.A291C:p.S97S	exonic	ENSG00000196878	NA	synonymous SNV	ENSG00000196878:ENST00000391911:exon3:c.A291C:p.S97S,ENSG00000196878:ENST00000356082:exon4:c.A291C:p.S97S,ENSG00000196878:ENST00000367030:exon4:c.A291C:p.S97S,ENSG00000196878:ENST00000415782:exon4:c.A291C:p.S97S	Score=483;Name=lod=122	NA	1q32.2	Score=882;Name=V$YY1_01	Name=Pol2(b)	NA	NA	rs2076356	0.48	0.48	0.467	0.432508	0.6412	0.2847	0.4582	0.3517	0.4611	0.65	0.3	0.54	0.38	0.5709	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.141044	NA	NA	0.646047	0.435089	ID=COSM146753;OCCURENCE=1(stomach)	0.341	NA	6.8085196
971	7	6370305	6370305	C	G	exonic	FAM220A	NA	nonsynonymous SNV	FAM220A:NM_001037163:exon2:c.G481C:p.V161L	exonic	ENSG00000178397	NA	nonsynonymous SNV	ENSG00000178397:ENST00000313324:exon2:c.G481C:p.V161L	NA	NA	7p22.1	NA	NA	NA	NA	rs3750039	0.68	0.68	0.66	0.722444	0.4573	0.8829	0.6571	0.8631	0.6861	0.45	0.88	0.63	0.83	0.5907	0.88	1	T	0.0	B	0.0	B	0.817	N	1.000	P	-1.1	N	3.42	T	-1.000	T	0.000	T	0.013	-0.361	2.298	-3.78	-0.771	-0.039	3.879	-0.360916	NA	1	0.476971	0.811621	NA	0.674	NA	6.8083624
971	22	50944128	50944128	G	A	exonic	LMF2	NA	synonymous SNV	LMF2:NM_033200:exon6:c.C891T:p.H297H	exonic	ENSG00000100258	NA	synonymous SNV	ENSG00000100258:ENST00000216080:exon6:c.C816T:p.H272H,ENSG00000100258:ENST00000380796:exon6:c.C891T:p.H297H,ENSG00000100258:ENST00000474879:exon6:c.C891T:p.H297H	NA	NA	22q13.33	NA	NA	NA	NA	rs743615	0.29	0.29	0.293	0.345847	0.2604	0.3909	0.3357	0.2859	0.4755	0.25	0.38	0.3	0.26	0.3093	0.39	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.962	T	0.000	T	.	-1.369	0.026	-5.84	-0.874	-0.487	7.599	-1.368851	NA	NA	0.289767	0.303044	NA	0.341	NA	6.8071996
971	1	165218679	165218679	C	T	exonic	LMX1A	NA	synonymous SNV	LMX1A:NM_001174069:exon4:c.G462A:p.L154L,LMX1A:NM_177398:exon4:c.G462A:p.L154L	exonic	ENSG00000162761	NA	synonymous SNV	ENSG00000162761:ENST00000367893:exon3:c.G462A:p.L154L,ENSG00000162761:ENST00000294816:exon4:c.G462A:p.L154L,ENSG00000162761:ENST00000342310:exon4:c.G462A:p.L154L	Score=603;Name=lod=375	NA	1q23.3	NA	NA	Name=3	NA	rs9970062	0.24	0.24	0.242	0.216853	0.3181	0.0823	0.2032	0.2867	0.1667	0.32	0.1	0.22	0.31	0.2455	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.146199	NA	NA	0.29686	0.298003	NA	0.304	NA	6.8062066
971	4	183664522	183664522	T	C	exonic	TENM3	NA	synonymous SNV	TENM3:NM_001080477:exon18:c.T3579C:p.Y1193Y	exonic	ENSG00000218336	NA	synonymous SNV	ENSG00000218336:ENST00000406950:exon18:c.T3579C:p.Y1193Y,ENSG00000218336:ENST00000511685:exon19:c.T3579C:p.Y1193Y	Score=571;Name=lod=278	NA	4q35.1	Score=843;Name=V$TST1_01	NA	NA	NA	rs7654255	0.25	0.25	0.255	0.233027	0.3012	0.1359	0.1412	0.3472	0.1738	0.32	0.12	0.17	0.33	0.2631	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.51646	NA	NA	0.296577	0.32341	NA	0.406	NA	6.8057896
971	7	99474427	99474427	A	G	exonic	OR2AE1	NA	nonsynonymous SNV	OR2AE1:NM_001005276:exon1:c.T230C:p.I77T	exonic	ENSG00000244623	NA	nonsynonymous SNV	ENSG00000244623:ENST00000316368:exon1:c.T230C:p.I77T	NA	NA	7q22.1	NA	Name=PU.1,ELF1_(SC-631),Rad21,CTCF,GATA-2,eGFP-GATA2,GATA2_(CG2-96)	NA	NA	rs2572023	0.53	0.53	0.539	0.555312	0.4851	0.2907	0.4251	0.9107	0.5123	0.5	0.26	0.47	0.92	0.5205	0.92	1	T	0.0	B	0.0	B	0.001	N	1.000	P	-0.19	N	5.28	T	-1.004	T	0.000	T	0.018	-3.11	0.001	0.807	-0.055	-0.121	7.169	-3.109683	NA	1	0.521977	0.836813	NA	0.572	NA	6.8057564
971	7	151573580	151573580	G	A	intronic	PRKAG2	NA	NA	NA	intronic	ENSG00000106617	NA	NA	NA	NA	NA	7q36.1	NA	Name=HA-E2F1	Name=100	NA	rs77902041	0.03	0.03	0.03	0.0277556	0.0676	NA	0.0418	0.0008	0.0419	0.06	NA	0.05	NA	0.0501	0.077	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.923462	1.923462	NA	0.07686	0.012483	NA	0.007	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000038907.1|RCV000127612.1;CLNDSDB=.|.;CLNDSDBID=.|.	6.80544
971	17	48545596	48545596	G	A	exonic	CHAD	NA	synonymous SNV	CHAD:NM_001267:exon1:c.C579T:p.D193D	exonic	ENSG00000136457	NA	synonymous SNV	ENSG00000136457:ENST00000258969:exon1:c.C579T:p.D193D,ENSG00000136457:ENST00000508540:exon1:c.C579T:p.D193D	NA	NA	17q21.33	Score=878;Name=V$ATF6_01	NA	Name=7	NA	rs34864120	0.22	0.22	0.186	0.188698	0.2992	0.1419	0.2536	0.0946	0.2045	0.29	0.15	0.31	0.14	0.2585	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.319379	NA	NA	0.303605	0.13754	NA	0.109	NA	6.8053616
971	12	4705317	4705317	C	T	exonic	DYRK4	NA	synonymous SNV	DYRK4:NM_003845:exon5:c.C285T:p.V95V	exonic	ENSG00000010219	NA	synonymous SNV	ENSG00000010219:ENST00000010132:exon4:c.C285T:p.V95V,ENSG00000010219:ENST00000543431:exon4:c.C285T:p.V95V,ENSG00000010219:ENST00000540757:exon5:c.C285T:p.V95V,ENSG00000010219:ENST00000542744:exon7:c.C630T:p.V210V	Score=648;Name=lod=574	NA	12p13.32	Score=935;Name=V$TCF11_01	NA	NA	NA	rs3741925	0.26	0.26	0.234	0.236222	0.2992	0.3135	0.2867	0.1044	0.2342	0.31	0.31	0.27	0.13	0.2787	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.097355	2.097355	NA	0.283721	0.117567	NA	0.319	NA	6.8050456
972	20	16486698	16486698	G	A	exonic	KIF16B	NA	synonymous SNV	KIF16B:NM_001199865:exon8:c.C837T:p.L279L,KIF16B:NM_001199866:exon8:c.C837T:p.L279L,KIF16B:NM_024704:exon8:c.C837T:p.L279L	exonic	ENSG00000089177	NA	synonymous SNV	ENSG00000089177:ENST00000354981:exon8:c.C837T:p.L279L,ENSG00000089177:ENST00000355755:exon8:c.C837T:p.L279L,ENSG00000089177:ENST00000408042:exon8:c.C837T:p.L279L	Score=613;Name=lod=415	NA	20p12.1	NA	NA	Name=9	NA	rs2295115	0.25	0.25	0.241	0.240815	0.2843	0.38	0.2839	0.0582	0.2689	0.28	0.36	0.28	0.05	0.2717	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.346533	1.346533	NA	0.30686	0.103949	NA	0.188	NA	6.8038066
972	20	25011423	25011423	T	C	exonic	ACSS1	NA	synonymous SNV	ACSS1:NM_001252676:exon2:c.A240G:p.A80A,ACSS1:NM_001252675:exon3:c.A603G:p.A201A,ACSS1:NM_001252677:exon3:c.A603G:p.A201A,ACSS1:NM_032501:exon3:c.A603G:p.A201A	exonic	ENSG00000154930	NA	synonymous SNV	ENSG00000154930:ENST00000537502:exon1:c.A354G:p.A118A,ENSG00000154930:ENST00000542618:exon2:c.A240G:p.A80A,ENSG00000154930:ENST00000323482:exon3:c.A603G:p.A201A,ENSG00000154930:ENST00000432802:exon3:c.A603G:p.A201A	NA	NA	20p11.21	Score=786;Name=V$TCF11MAFG_01	Name=NRSF	NA	NA	rs6050259	0.23	0.23	0.207	0.222644	0.3072	0.0873	0.2305	0.2806	0.1912	0.29	0.1	0.26	0.25	0.2465	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.646236	NA	NA	0.309651	0.297095	NA	0.174	NA	6.8033156
972	9	135985796	135985796	C	T	exonic	RALGDS	NA	synonymous SNV	RALGDS:NM_001042368:exon3:c.G210A:p.V70V,RALGDS:NM_001271774:exon3:c.G324A:p.V108V,RALGDS:NM_001271775:exon3:c.G372A:p.V124V,RALGDS:NM_001271776:exon3:c.G375A:p.V125V,RALGDS:NM_006266:exon3:c.G375A:p.V125V	exonic	ENSG00000160271	NA	synonymous SNV	ENSG00000160271:ENST00000372047:exon3:c.G375A:p.V125V,ENSG00000160271:ENST00000372050:exon3:c.G375A:p.V125V,ENSG00000160271:ENST00000372062:exon3:c.G324A:p.V108V,ENSG00000160271:ENST00000393157:exon3:c.G372A:p.V124V,ENSG00000160271:ENST00000393160:exon3:c.G210A:p.V70V,ENSG00000160271:ENST00000542690:exon8:c.G588A:p.V196V	Score=516;Name=lod=166	NA	9q34.2	Score=875;Name=V$TAL1BETAE47_01,V$TAL1ALPHAE47_01	NA	NA	NA	rs3761824	0.23	0.23	0.218	0.248602	0.2704	0.3204	0.2161	0.1278	0.3384	0.25	0.3	0.2	0.12	0.2853	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.435568	1.435568	NA	0.308023	0.155995	NA	0.145	NA	6.8029436
972	3	135720673	135720673	T	C	exonic	PPP2R3A	NA	synonymous SNV	PPP2R3A:NM_002718:exon2:c.T333C:p.D111D	exonic	ENSG00000073711	NA	synonymous SNV	ENSG00000073711:ENST00000264977:exon2:c.T333C:p.D111D	Score=692;Name=lod=863	NA	3q22.3	Score=833;Name=V$CHOP_01	NA	NA	NA	rs9872542	0.17	0.17	0.157	0.186901	0.2783	0.0288	0.1455	0.202	0.2648	0.27	0.02	0.16	0.18	0.2699	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.04034	NA	NA	0.315538	0.216523	NA	0.232	NA	6.8029286
972	3	187089031	187089031	C	A	exonic	RTP4	NA	nonsynonymous SNV	RTP4:NM_022147:exon2:c.C611A:p.A204D	exonic	ENSG00000136514	NA	nonsynonymous SNV	ENSG00000136514:ENST00000259030:exon2:c.C611A:p.A204D	NA	NA	3q27.3	NA	NA	NA	NA	rs1003995	0.31	0.31	0.273	0.287939	0.3419	0.4504	0.4524	0.0348	0.2904	0.34	0.44	0.4	0.06	0.343	0.44	0.3	T	0.718	P	0.22	B	.	.	1.000	P	0.345	N	2.12	T	-0.924	T	0.000	T	0.072	1.79	11.95	0.673	0.154	0.841	3.525	1.790253	1.790253	0.69	0.345698	0.101906	NA	0.181	NA	6.8027354
972	12	8374812	8374812	G	A	exonic	FAM90A1	NA	nonsynonymous SNV	FAM90A1:NM_018088:exon7:c.C1001T:p.P334L	exonic	ENSG00000171847	NA	nonsynonymous SNV	ENSG00000171847:ENST00000307435:exon6:c.C1001T:p.P334L,ENSG00000171847:ENST00000538603:exon7:c.C1001T:p.P334L	NA	NA	12p13.31	NA	NA	NA	NA	rs17855656	0.21	0.21	0.165	0.226038	0.1829	0.4087	0.1801	0.0983	0.2873	0.17	0.38	0.19	0.09	0.1999	0.38	0.22	T	0.023	B	0.014	B	.	.	1.000	P	0.935	L	2.43	T	-0.910	T	0.000	T	0.097	-2.031	0.006	-1.44	-0.509	-0.651	4.048	-2.030824	NA	0.12	0.149346	0.086877	ID=COSM1364570;OCCURENCE=1(large_intestine)	0.029	NA	6.8011874
972	2	97020049	97020049	T	C	exonic	NCAPH	NA	synonymous SNV	NCAPH:NM_015341:exon9:c.T1131C:p.D377D	exonic	ENSG00000121152	NA	synonymous SNV	ENSG00000121152:ENST00000427946:exon8:c.T723C:p.D241D,ENSG00000121152:ENST00000240423:exon9:c.T1131C:p.D377D,ENSG00000121152:ENST00000435975:exon9:c.T1098C:p.D366D,ENSG00000121152:ENST00000455200:exon9:c.T1098C:p.D366D	Score=265;Name=lod=16	NA	2q11.2	NA	Name=CTCF	NA	NA	rs3731935	0.2	0.2	0.192	0.279153	0.2763	0.2232	0.2334	0.0416	0.6933	0.27	0.2	0.24	0.05	0.3032	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.515178	NA	NA	0.287209	0.079664	ID=COSM148905;OCCURENCE=1(stomach)	0.152	NA	6.7999576
972	3	14559314	14559314	G	A	exonic	GRIP2	NA	unknown	UNKNOWN	ncRNA_exonic	ENSG00000144596	NA	NA	NA	Score=497;Name=lod=140	NA	3p25.1	Score=916;Name=V$LMO2COM_01	NA	NA	NA	rs139277068	0.01	0.01	0.006	0.00579073	0.0099	NA	0.0043	0.0008	0.0153	0.01	NA	0.01	NA	0.0137	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.539791	NA	NA	0.009887	0.002004	NA	0.007	NA	6.7998463
972	19	49379167	49379167	C	T	exonic	PPP1R15A	NA	synonymous SNV	PPP1R15A:NM_014330:exon3:c.C1962T:p.A654A	exonic	ENSG00000087074	NA	synonymous SNV	ENSG00000087074:ENST00000200453:exon3:c.C1962T:p.A654A	NA	NA	19q13.33	NA	Name=Pol2-4H8,c-Myc,ZBTB7A_(SC-34508),Pol2	Name=66	NA	rs524	0.34	0.34	0.333	0.356629	0.2803	0.1984	0.2896	0.5764	0.3487	0.28	0.23	0.29	0.58	0.2995	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.56285	NA	NA	0.287093	0.515207	NA	0.391	NA	6.7997736
972	19	49379182	49379182	G	C	exonic	PPP1R15A	NA	synonymous SNV	PPP1R15A:NM_014330:exon3:c.G1977C:p.S659S	exonic	ENSG00000087074	NA	synonymous SNV	ENSG00000087074:ENST00000200453:exon3:c.G1977C:p.S659S	NA	NA	19q13.33	NA	Name=Pol2-4H8,ZBTB7A_(SC-34508),c-Myc,Pol2	Name=66	NA	rs527	0.34	0.34	0.363	0.356629	0.2803	0.1984	0.2896	0.5764	0.3487	0.28	0.23	0.29	0.58	0.3003	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.166002	NA	NA	0.287093	0.515887	NA	0.362	NA	6.7989736
972	15	41857303	41857303	T	C	exonic	TYRO3	NA	synonymous SNV	TYRO3:NM_006293:exon6:c.T747C:p.A249A	exonic	ENSG00000092445	NA	synonymous SNV	ENSG00000092445:ENST00000263798:exon6:c.T747C:p.A249A,ENSG00000092445:ENST00000559066:exon6:c.T612C:p.A204A	Score=336;Name=lod=31	NA	15q15.1	Score=732;Name=V$NRSF_01	NA	NA	NA	rs2277536	0.27	0.27	0.228	0.267173	0.3082	0.1736	0.4063	0.1959	0.319	0.32	0.16	0.4	0.22	0.2746	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.752909	1.752909	NA	0.285465	0.201997	NA	0.167	NA	6.7984016
972	1	169510475	169510475	G	T	exonic	F5	NA	nonsynonymous SNV	F5:NM_000130:exon13:c.C3853A:p.L1285I	exonic	ENSG00000198734	NA	nonsynonymous SNV	ENSG00000198734:ENST00000367796:exon13:c.C3868A:p.L1290I,ENSG00000198734:ENST00000367797:exon13:c.C3853A:p.L1285I	NA	NA	1q24.2	NA	NA	NA	NA	rs1046712	0.15	0.15	0.122	0.164736	0.1819	0.1131	0.1441	0.1611	0.2198	0.18	0.12	0.15	0.13	0.1788	0.18	0.41	T	0.003	B	0.002	B	0.134	N	1.000	N	1.07	L	1.2	T	-1.052	T	0.019	T	0.045	-0.243	2.831	-1.42	-0.125	0.152	0.717	-0.242704	NA	0.24	0.174651	0.175897	NA	0.138	NA	6.7979824
972	3	4842231	4842231	C	T	exonic	ITPR1	NA	synonymous SNV	ITPR1:NM_002222:exon50:c.C6865T:p.L2289L,ITPR1:NM_001099952:exon51:c.C6910T:p.L2304L,ITPR1:NM_001168272:exon53:c.C7009T:p.L2337L	exonic	ENSG00000150995	NA	synonymous SNV	ENSG00000150995:ENST00000456211:exon50:c.C6865T:p.L2289L,ENSG00000150995:ENST00000357086:exon51:c.C6910T:p.L2304L,ENSG00000150995:ENST00000423119:exon51:c.C6910T:p.L2304L,ENSG00000150995:ENST00000443694:exon51:c.C7009T:p.L2337L,ENSG00000150995:ENST00000302640:exon53:c.C7009T:p.L2337L,ENSG00000150995:ENST00000354582:exon53:c.C7009T:p.L2337L	Score=403;Name=lod=58	NA	3p26.1	NA	NA	NA	NA	rs2291862	0.3	0.3	0.255	0.264577	0.3062	0.377	0.3617	0.1165	0.2372	0.29	0.4	0.36	0.15	0.2868	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.145787	NA	NA	0.275979	0.134774	NA	0.362	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117303.2;CLNDSDB=.;CLNDSDBID=.	6.7976876
972	21	47423507	47423507	G	A	exonic	COL6A1	NA	synonymous SNV	COL6A1:NM_001848:exon35:c.G2667A:p.A889A	exonic	ENSG00000142156	NA	synonymous SNV	ENSG00000142156:ENST00000361866:exon35:c.G2667A:p.A889A	NA	NA	21q22.3	NA	NA	Name=11	NA	rs1053315	0.28	0.28	0.259	0.268171	0.2734	0.1379	0.281	0.4077	0.1994	0.27	0.16	0.29	0.41	0.2859	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.789434	NA	NA	0.310188	0.3901	ID=COSM329269;OCCURENCE=1(breast),1(haematopoietic_and_lymphoid_tissue)	0.326	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000079801.3;CLNDSDB=.;CLNDSDBID=.	6.7971786
972	1	61869783	61869783	G	A	exonic	NFIA	NA	synonymous SNV	NFIA:NM_001134673:exon8:c.G1083A:p.P361P,NFIA:NM_001145511:exon8:c.G1059A:p.P353P,NFIA:NM_005595:exon8:c.G1083A:p.P361P,NFIA:NM_001145512:exon9:c.G1218A:p.P406P	exonic	ENSG00000162599	NA	synonymous SNV	ENSG00000162599:ENST00000357977:exon1:c.G27A:p.P9P,ENSG00000162599:ENST00000371184:exon4:c.G696A:p.P232P,ENSG00000162599:ENST00000371185:exon7:c.G1017A:p.P339P,ENSG00000162599:ENST00000485903:exon7:c.G954A:p.P318P,ENSG00000162599:ENST00000371187:exon8:c.G1083A:p.P361P,ENSG00000162599:ENST00000371191:exon8:c.G1152A:p.P384P,ENSG00000162599:ENST00000403491:exon8:c.G1083A:p.P361P,ENSG00000162599:ENST00000407417:exon8:c.G1059A:p.P353P,ENSG00000162599:ENST00000371189:exon9:c.G1218A:p.P406P	NA	NA	1p31.3	NA	Name=USF-1,KAP1	Name=45	NA	rs2236059	0.37	0.37	0.349	0.353834	0.2853	0.5625	0.3761	0.289	0.2812	0.31	0.57	0.34	0.25	0.3185	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.016447	NA	NA	0.267326	0.285747	NA	0.333	NA	6.7955406
972	16	74877733	74877733	A	G	intergenic	FA2H,WDR59	dist=69004;dist=29738	NA	NA	ncRNA_exonic	ENSG00000261458	NA	NA	NA	Score=531;Name=lod=192	NA	16q23.1	NA	Name=FOXA1_(C-20)	Name=13	NA	rs12923470	0.31	0.31	0.269	0.322284	0.2048	0.5446	0.4251	0.1218	0.4121	0.22	0.56	0.33	0.12	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.276136	1.276136	NA	NA	NA	NA	0.21	NA	6.7952
973	7	47913580	47913580	G	A	exonic	PKD1L1	NA	synonymous SNV	PKD1L1:NM_138295:exon24:c.C3813T:p.G1271G	exonic	ENSG00000158683	NA	synonymous SNV	ENSG00000158683:ENST00000289672:exon24:c.C3813T:p.G1271G	NA	NA	7p12.3	Score=867;Name=V$TAL1ALPHAE47_01	NA	Name=67	NA	rs73105162	0.22	0.22	0.261	0.304313	0.2932	0.0962	0.3357	0.4455	0.317	0.22	0.08	0.29	0.32	0.299	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.283526	NA	NA	0.280581	0.416478	NA	NA	NA	6.7938856
973	10	101445591	101445591	A	C	exonic	ENTPD7	NA	synonymous SNV	ENTPD7:NM_020354:exon6:c.A591C:p.P197P	exonic	ENSG00000198018	NA	synonymous SNV	ENSG00000198018:ENST00000370489:exon6:c.A591C:p.P197P	NA	NA	10q24.2	NA	Name=GATA2_(CG2-96),STAT3,EBF1_(C-8),ELF1_(SC-631),PU.1,Pol2	Name=56	NA	rs3740078	0.28	0.28	0.267	0.251597	0.3082	0.2956	0.2277	0.233	0.1902	0.32	0.28	0.23	0.23	0.2657	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.925864	NA	NA	0.298953	0.231502	NA	0.225	NA	6.7938136
973	8	27312135	27312135	G	A	intronic	PTK2B	NA	NA	NA	intronic	ENSG00000120899	NA	NA	NA	Score=405;Name=lod=59	NA	8p21.2	Score=880;Name=V$AREB6_01	Name=Max,CTCF	Name=24	NA	rs7007145	0.38	0.38	0.401	0.428914	0.3956	0.1964	0.4121	0.6392	0.4305	0.41	0.16	0.38	0.6	0.4026	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.586305	NA	NA	0.408372	0.590331	NA	0.551	NA	6.793428
973	1	156639753	156639753	G	A	exonic	NES	NA	synonymous SNV	NES:NM_006617:exon4:c.C4227T:p.S1409S	exonic	ENSG00000132688	NA	synonymous SNV	ENSG00000132688:ENST00000368223:exon4:c.C4227T:p.S1409S	Score=484;Name=lod=124	NA	1q23.1	Score=709;Name=V$HOX13_01	Name=ZNF263	NA	NA	rs11582300	0.65	0.65	0.609	0.618411	0.6312	0.8611	0.6787	0.385	0.6278	0.63	0.85	0.68	0.4	0.623	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.719571	NA	NA	0.61953	0.399001	NA	0.478	NA	6.7929366
973	6	29796327	29796327	C	T	exonic	HLA-G	NA	synonymous SNV	HLA-G:NM_002127:exon4:c.C351T:p.H117H	exonic	ENSG00000204632	NA	synonymous SNV	ENSG00000204632:ENST00000360323:exon3:c.C351T:p.H117H,ENSG00000204632:ENST00000376828:exon4:c.C366T:p.H122H,ENSG00000204632:ENST00000428701:exon4:c.C351T:p.H117H	Score=300;Name=lod=22	NA	6p22.1	NA	NA	Name=2	NA	rs1130356	0.24	0.24	0.248	0.2502	0.2763	0.1141	0.2565	0.2625	0.3425	0.28	0.15	0.23	0.3	0.2853	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.09715	NA	NA	0.312408	0.272697	NA	0.261	NA	6.7926586
973	21	43531553	43531553	A	C	exonic	UMODL1	NA	nonsynonymous SNV	UMODL1:NM_001199527:exon11:c.A2005C:p.T669P,UMODL1:NM_173568:exon11:c.A2221C:p.T741P	exonic	ENSG00000177398	NA	nonsynonymous SNV	ENSG00000177398:ENST00000400427:exon11:c.A2005C:p.T669P,ENSG00000177398:ENST00000408989:exon11:c.A2221C:p.T741P	NA	NA	21q22.3	NA	Name=EBF	NA	NA	rs220128	0.45	0.45	0.405	0.416134	0.5318	0.5357	0.5101	0.1573	0.4571	0.56	0.51	0.5	0.19	0.495	0.56	1	T	0.0	B	0.0	B	0.093	N	1.000	P	.	.	-0.61	T	-0.973	T	0.000	T	0.02	-0.943	0.354	-0.782	-0.579	-0.444	3.390	-0.943422	NA	0.38	0.514124	0.229504	NA	0.428	NA	6.7924094
973	19	58572979	58572979	G	A	exonic	ZNF135	NA	nonsynonymous SNV	ZNF135:NM_001164527:exon2:c.G101A:p.G34D,ZNF135:NM_001164529:exon2:c.G101A:p.G34D,ZNF135:NM_001164530:exon2:c.G101A:p.G34D,ZNF135:NM_007134:exon2:c.G101A:p.G34D,ZNF135:NM_003436:exon3:c.G65A:p.G22D	exonic	ENSG00000176293	NA	nonsynonymous SNV	ENSG00000176293:ENST00000359978:exon2:c.G101A:p.G34D,ENSG00000176293:ENST00000401053:exon2:c.G101A:p.G34D,ENSG00000176293:ENST00000515535:exon2:c.G65A:p.G22D,ENSG00000176293:ENST00000313434:exon3:c.G65A:p.G22D,ENSG00000176293:ENST00000439855:exon3:c.G65A:p.G22D,ENSG00000176293:ENST00000511556:exon3:c.G65A:p.G22D	Score=371;Name=lod=43	NA	19q13.43	NA	NA	NA	NA	rs1469087	0.78	0.78	0.807	0.782548	0.8598	0.4871	0.8184	0.9342	0.7771	0.86	0.52	0.82	0.94	0.8251	0.94	1	T	0.0	B	0.001	B	.	.	0.000	P	-2.145	N	4.97	T	-1.066	T	0.000	T	0.499	-1.717	0.011	1.48	0.022	1.107	5.863	-1.716744	NA	1	0.856512	0.928507	NA	0.841	NA	6.7919214
973	3	47712202	47712202	T	C	exonic	SMARCC1	NA	synonymous SNV	SMARCC1:NM_003074:exon19:c.A1845G:p.K615K	exonic	ENSG00000173473	NA	synonymous SNV	ENSG00000173473:ENST00000254480:exon19:c.A1845G:p.K615K	Score=571;Name=lod=278	NA	3p21.31	NA	NA	Name=9	NA	rs1141601	0.25	0.25	0.216	0.184904	0.3221	0.251	0.2795	0.0113	0.1431	0.33	0.28	0.33	0.02	0.2718	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.025163	NA	NA	0.282326	0.05833	NA	0.283	NA	6.7904406
973	16	85706047	85706047	A	C	exonic	GSE1	NA	synonymous SNV	GSE1:NM_001134473:exon15:c.A3244C:p.R1082R,GSE1:NM_014615:exon16:c.A3556C:p.R1186R	exonic	ENSG00000131149	NA	synonymous SNV	ENSG00000131149:ENST00000393243:exon15:c.A3337C:p.R1113R,ENSG00000131149:ENST00000405402:exon15:c.A3244C:p.R1082R,ENSG00000131149:ENST00000253458:exon16:c.A3556C:p.R1186R	NA	NA	16q24.1	NA	NA	NA	NA	rs9940601	0.68	0.68	0.663	0.681909	0.6044	0.873	0.5562	0.6082	0.7536	0.61	0.88	0.57	0.62	0.6568	0.88	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.930	T	0.000	T	.	-1.017	0.237	-4.9	-1.792	-0.023	23.865	-1.016584	NA	NA	0.615116	0.635123	NA	0.63	NA	6.7903506
973	7	43506059	43506059	A	G	exonic	HECW1	NA	synonymous SNV	HECW1:NM_015052:exon15:c.A2805G:p.E935E	exonic	ENSG00000002746	NA	synonymous SNV	ENSG00000002746:ENST00000453890:exon13:c.A2703G:p.E901E,ENSG00000002746:ENST00000395891:exon15:c.A2805G:p.E935E	Score=492;Name=lod=133	NA	7p13	Score=811;Name=V$ER_Q6	NA	Name=35	NA	rs2304329	0.54	0.54	0.529	0.555312	0.6352	0.3879	0.5533	0.5098	0.7086	0.64	0.42	0.58	0.49	0.6098	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.984753	NA	NA	0.631955	0.521828	NA	0.652	NA	6.7897116
973	3	49738945	49738945	C	T	exonic	RNF123	NA	synonymous SNV	RNF123:NM_022064:exon16:c.C1299T:p.V433V	exonic	ENSG00000164068	NA	synonymous SNV	ENSG00000164068:ENST00000432042:exon13:c.C861T:p.V287V,ENSG00000164068:ENST00000327697:exon16:c.C1299T:p.V433V,ENSG00000164068:ENST00000457726:exon16:c.C1299T:p.V433V	NA	NA	3p21.31	NA	Name=CTCF_(C-20),Rad21,CTCF,CTCF_(SC-5916)	Name=17	NA	rs6804655	0.22	0.22	0.247	0.238219	0.3091	0.1518	0.2017	0.2095	0.319	0.3	0.17	0.19	0.17	0.2684	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.206803	NA	NA	0.300349	0.207217	NA	0.174	NA	6.7888176
973	22	20959252	20959252	A	G	intergenic	MED15,POM121L4P	dist=17333;dist=84591	NA	NA	ncRNA_exonic	ENSG00000223553	NA	NA	NA	Score=570;Name=lod=277	NA	22q11.21	NA	Name=Rad21,CTCF,CTCF_(SC-5916),ZBTB7A_(SC-34508)	Name=6	NA	rs526942	0.36	0.36	0.368	0.432907	0.2117	0.377	0.3098	0.6687	0.4867	0.21	0.34	0.27	0.66	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.020341	NA	NA	NA	NA	NA	0.384	NA	6.7883
973	11	8435077	8435077	C	T	exonic	STK33	NA	nonsynonymous SNV	STK33:NM_030906:exon13:c.G1309A:p.A437T	exonic	ENSG00000130413	NA	nonsynonymous SNV	ENSG00000130413:ENST00000358872:exon10:c.G748A:p.A250T,ENSG00000130413:ENST00000447869:exon11:c.G1309A:p.A437T,ENSG00000130413:ENST00000396672:exon12:c.G1309A:p.A437T,ENSG00000130413:ENST00000315204:exon13:c.G1309A:p.A437T,ENSG00000130413:ENST00000534493:exon13:c.G1186A:p.A396T	NA	NA	11p15.4	NA	NA	NA	NA	rs3751095	0.19	0.19	NA	0.249601	0.2545	0.2877	0.2565	0.1142	0.3834	0.18	0.22	0.28	0.08	0.2567	0.28	0.61	T	0.002	B	0.001	B	0.001	N	1.000	P	0	N	-0.47	T	-1.091	T	0.000	T	0.039	1.407	10.64	-1.09	-0.280	-0.871	3.052	1.407242	1.407242	0.47	0.034101	0.011358	NA	NA	NA	6.7880324
973	10	88702390	88702390	G	A	exonic	MMRN2	NA	synonymous SNV	MMRN2:NM_024756:exon6:c.C2151T:p.A717A	exonic	ENSG00000173269	NA	synonymous SNV	ENSG00000173269:ENST00000372027:exon6:c.C2151T:p.A717A	Score=336;Name=lod=31	NA	10q23.2	NA	NA	Name=9	NA	rs10887673	0.19	0.19	0.2	0.202276	0.3002	0.0645	0.2248	0.1142	0.3466	0.31	0.07	0.26	0.11	0.2776	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.388092	NA	NA	0.30114	0.144934	NA	0.246	NA	6.7877266
973	10	11356160	11356160	C	T	exonic	CELF2	NA	synonymous SNV	CELF2:NM_001025076:exon10:c.C942T:p.L314L,CELF2:NM_001025077:exon10:c.C1014T:p.L338L,CELF2:NM_001083591:exon10:c.C942T:p.L314L,CELF2:NM_006561:exon10:c.C1035T:p.L345L	exonic	ENSG00000048740	NA	synonymous SNV	ENSG00000048740:ENST00000537122:exon8:c.C681T:p.L227L,ENSG00000048740:ENST00000354897:exon9:c.C942T:p.L314L,ENSG00000048740:ENST00000315874:exon10:c.C942T:p.L314L,ENSG00000048740:ENST00000354440:exon10:c.C942T:p.L314L,ENSG00000048740:ENST00000379261:exon10:c.C1014T:p.L338L,ENSG00000048740:ENST00000399850:exon10:c.C942T:p.L314L,ENSG00000048740:ENST00000416382:exon10:c.C1014T:p.L338L,ENSG00000048740:ENST00000417956:exon10:c.C942T:p.L314L,ENSG00000048740:ENST00000427450:exon10:c.C942T:p.L314L,ENSG00000048740:ENST00000450189:exon10:c.C1035T:p.L345L,ENSG00000048740:ENST00000542579:exon10:c.C1035T:p.L345L	Score=694;Name=lod=879	NA	10p14	Score=863;Name=V$NFKB_C	NA	NA	NA	rs2246449	0.39	0.39	0.398	0.451078	0.2684	0.4871	0.2594	0.6377	0.4857	0.27	0.49	0.24	0.57	0.3493	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.239411	1.239411	NA	0.26149	0.559771	NA	0.464	NA	6.7874766
973	12	11338781	11338781	C	A	exonic	TAS2R42	NA	nonsynonymous SNV	TAS2R42:NM_181429:exon1:c.G763T:p.G255W	exonic	ENSG00000186136	NA	nonsynonymous SNV	ENSG00000186136:ENST00000334266:exon1:c.G763T:p.G255W	NA	NA	12p13.2	NA	NA	NA	NA	rs1669413	0.79	0.79	0.766	0.760783	0.8688	0.9514	0.8473	0.407	0.8701	0.88	0.96	0.85	0.42	0.838	0.96	0.55	T	0.0	B	0.0	B	0.117	N	1.000	P	-2.79	N	1.21	T	-0.981	T	0.000	T	0.11	0.176	4.947	2.32	0.588	1.221	3.936	0.17602	NA	0.6	0.839651	0.467771	NA	0.746	NA	6.7868824
973	11	8435078	8435078	A	C	exonic	STK33	NA	nonsynonymous SNV	STK33:NM_030906:exon13:c.T1308G:p.D436E	exonic	ENSG00000130413	NA	nonsynonymous SNV	ENSG00000130413:ENST00000358872:exon10:c.T747G:p.D249E,ENSG00000130413:ENST00000447869:exon11:c.T1308G:p.D436E,ENSG00000130413:ENST00000396672:exon12:c.T1308G:p.D436E,ENSG00000130413:ENST00000315204:exon13:c.T1308G:p.D436E,ENSG00000130413:ENST00000534493:exon13:c.T1185G:p.D395E	NA	NA	11p15.4	NA	NA	NA	NA	rs3751096	0.19	0.19	NA	0.249601	0.2545	0.2877	0.2565	0.1142	0.3834	0.18	0.22	0.28	0.08	0.2566	0.28	0.36	T	0.079	B	0.009	B	0.553	N	1.000	P	0.805	L	-0.41	T	-1.100	T	0.000	T	0.066	0.9	8.659	1.14	0.379	0.097	6.157	0.900084	NA	0.6	0.035382	0.015448	NA	NA	NA	6.7868514
973	1	248059456	248059456	G	A	exonic	OR2W3	NA	nonsynonymous SNV	OR2W3:NM_001001957:exon1:c.G568A:p.V190I	exonic	ENSG00000238243	NA	nonsynonymous SNV	ENSG00000238243:ENST00000360358:exon1:c.G568A:p.V190I,ENSG00000238243:ENST00000537741:exon3:c.G568A:p.V190I	NA	NA	1q44	NA	NA	NA	NA	rs12135078	0.38	0.38	0.347	0.363618	0.5507	0.5327	0.3357	0.0545	0.4346	0.52	0.47	0.35	0.07	0.4613	0.54	0.08	T	0.145	B	0.104	B	0.120	N	1.000	P	1.525	L	8.76	T	-1.000	T	0.000	T	0.024	0.723	7.848	0.041	0.382	-1.678	4.048	0.723453	NA	0.07	0.535465	0.135497	ID=COSM1600163;OCCURENCE=1(central_nervous_system)	0.362	NA	6.7858684
973	12	93150102	93150102	T	C	exonic	PLEKHG7	NA	nonsynonymous SNV	PLEKHG7:NM_001004330:exon8:c.T635C:p.M212T	exonic	ENSG00000187510	NA	nonsynonymous SNV	ENSG00000187510:ENST00000344636:exon8:c.T635C:p.M212T	Score=536;Name=lod=202	NA	12q22	NA	NA	NA	NA	rs924326	0.64	0.64	0.612	0.647564	0.4871	0.8919	0.7017	0.5628	0.637	0.49	0.9	0.68	0.54	0.5706	0.9	1	T	0.001	B	0.0	B	0.023	N	1.000	P	0.14	N	1.56	T	-0.946	T	0.000	T	0.041	-1.586	0.014	1.11	-0.061	-0.625	1.025	-1.585935	NA	1	0.490116	0.538811	NA	0.5	NA	6.7855174
973	3	49751585	49751585	C	T	exonic	RNF123	NA	synonymous SNV	RNF123:NM_022064:exon31:c.C2988T:p.D996D	exonic	ENSG00000164068	NA	synonymous SNV	ENSG00000164068:ENST00000433785:exon5:c.C324T:p.D108D,ENSG00000164068:ENST00000327697:exon31:c.C2988T:p.D996D	Score=548;Name=lod=226	NA	3p21.31	Score=851;Name=V$CHX10_01	NA	NA	NA	rs2291542	0.23	0.23	0.239	0.250399	0.3091	0.1538	0.2061	0.2519	0.319	0.3	0.17	0.2	0.21	0.2712	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.834875	NA	NA	0.30093	0.25261	ID=COSM1424005;OCCURENCE=1(large_intestine)	0.181	NA	6.7854366
973	1	10435324	10435324	C	A	exonic	KIF1B	NA	synonymous SNV	KIF1B:NM_015074:exon46:c.C5163A:p.T1721T	exonic	ENSG00000054523	NA	synonymous SNV	ENSG00000054523:ENST00000263934:exon46:c.C5163A:p.T1721T,ENSG00000054523:ENST00000377081:exon47:c.C5301A:p.T1767T,ENSG00000054523:ENST00000377086:exon48:c.C5301A:p.T1767T	Score=620;Name=lod=440	NA	1p36.22	NA	NA	NA	NA	rs11121552	0.26	0.26	0.238	0.231629	0.3091	0.2827	0.3199	0.0575	0.272	0.31	0.31	0.35	0.07	0.2717	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.893251	NA	NA	0.300581	0.093736	ID=COSM146393;OCCURENCE=1(stomach)	0.196	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117408.2;CLNDSDB=.;CLNDSDBID=.	6.7852856
974	21	38525356	38525356	T	C	exonic	TTC3	NA	nonsynonymous SNV	TTC3:NM_001001894:exon27:c.T2519C:p.M840T,TTC3:NM_003316:exon27:c.T2519C:p.M840T	exonic	ENSG00000182670	NA	nonsynonymous SNV	ENSG00000182670:ENST00000540756:exon18:c.T1589C:p.M530T,ENSG00000182670:ENST00000354749:exon26:c.T2519C:p.M840T,ENSG00000182670:ENST00000438055:exon26:c.T2465C:p.M822T,ENSG00000182670:ENST00000355666:exon27:c.T2519C:p.M840T,ENSG00000182670:ENST00000399017:exon27:c.T2519C:p.M840T,ENSG00000182670:ENST00000418766:exon27:c.T2519C:p.M840T	Score=459;Name=lod=98	NA	21q22.13	NA	NA	NA	NA	rs1053808	0.61	0.61	0.59	0.627995	0.505	0.621	0.6628	0.7103	0.6258	0.5	0.65	0.64	0.71	0.5582	0.71	1	T	0.0	B	0.0	B	0.032	N	0.000	P	-0.69	N	3.28	T	-0.928	T	0.000	T	0.228	-2.135	0.005	-0.107	-0.472	0.014	12.196	-2.135049	NA	1	0.486163	0.687472	NA	0.703	NA	6.7839704
974	19	33183352	33183352	G	C	exonic	NUDT19	NA	synonymous SNV	NUDT19:NM_001105570:exon1:c.G486C:p.P162P	exonic	ENSG00000213965	NA	synonymous SNV	ENSG00000213965:ENST00000397061:exon1:c.G486C:p.P162P	NA	NA	19q13.11	NA	Name=E2F6_(H-50),PU.1,Pol2,E2F6,Max,ELF1_(SC-631),Egr-1,Sin3Ak-20,Nrf1	Name=132	NA	rs61732600	0.26	0.26	0.251	0.221446	0.3062	0.249	0.245	0.1498	0.1861	0.28	0.3	0.23	0.18	0.3202	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.849796	NA	NA	0.256665	0.140841	NA	0.072	NA	6.7836016
974	1	9009444	9009444	A	C	exonic	CA6	NA	nonsynonymous SNV	CA6:NM_001215:exon2:c.A202C:p.M68L,CA6:NM_001270500:exon2:c.A202C:p.M68L	exonic	ENSG00000131686	NA	nonsynonymous SNV	ENSG00000131686:ENST00000319474:exon2:c.A202C:p.M68L,ENSG00000131686:ENST00000377436:exon2:c.A202C:p.M68L,ENSG00000131686:ENST00000377443:exon2:c.A202C:p.M68L,ENSG00000131686:ENST00000480186:exon2:c.A202C:p.M68L	NA	NA	1p36.23	NA	NA	NA	NA	rs2274328	0.49	0.49	0.477	0.501398	0.5358	0.4127	0.4712	0.5598	0.5	0.51	0.42	0.5	0.54	0.4908	0.55	.	.	0.0	B	0.0	B	0.000	N	0.000	P	-2.015	N	0.07	T	-0.928	T	0.000	T	0.093	-0.489	1.753	2.4	0.058	0.497	4.599	-0.488725	NA	0.84	0.523837	0.545393	ID=COSM1599878,COSM1599877;OCCURENCE=1(central_nervous_system)	0.449	NA	6.7828964
974	19	44418077	44418077	C	T	exonic	ZNF45	NA	nonsynonymous SNV	ZNF45:NM_003425:exon10:c.G1511A:p.R504K	exonic	ENSG00000124459	NA	nonsynonymous SNV	ENSG00000124459:ENST00000589703:exon4:c.G1511A:p.R504K,ENSG00000124459:ENST00000269973:exon10:c.G1511A:p.R504K	NA	NA	19q13.31	NA	NA	NA	NA	rs407731	0.57	0.57	0.554	0.52516	0.5169	0.7996	0.6484	0.3336	0.4223	0.51	0.82	0.57	0.38	0.5279	0.82	0.11	T	0.0	B	0.0	B	0.035	N	1.000	P	-0.765	N	3.2	T	-1.083	T	0.000	T	0.029	0.221	5.19	2.56	0.096	0.794	5.963	0.220623	NA	0.79	0.50593	0.358829	NA	0.5	NA	6.7826034
974	16	81242151	81242151	T	C	exonic	PKD1L2	NA	synonymous SNV	PKD1L2:NM_001076780:exon4:c.A705G:p.G235G	exonic	ENSG00000166473,ENSG00000269323	NA	synonymous SNV	ENSG00000166473:ENST00000337114:exon4:c.A705G:p.G235G,ENSG00000269323:ENST00000599697:exon4:c.A705G:p.G235G	Score=496;Name=lod=138	NA	16q23.2	Score=895;Name=V$CEBP_01	NA	NA	NA	rs5818326	NA	NA	NA	0.441494	0.4205	0.8026	0.4625	0.1717	0.4407	NA	NA	NA	NA	0.4641	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.172191	NA	NA	NA	NA	ID=COSM314180,COSM314179;OCCURENCE=1(breast),1(lung)	NA	NA	6.7820666
974	8	125076589	125076589	T	G	exonic	FER1L6	NA	nonsynonymous SNV	FER1L6:NM_001039112:exon26:c.T3330G:p.D1110E	exonic	ENSG00000214814	NA	nonsynonymous SNV	ENSG00000214814:ENST00000399018:exon25:c.T3330G:p.D1110E,ENSG00000214814:ENST00000522917:exon26:c.T3330G:p.D1110E	NA	NA	8q24.13	NA	NA	NA	NA	rs7012186	0.78	0.78	0.778	0.773363	0.8708	0.6716	0.7089	0.7746	0.8221	0.86	0.7	0.75	0.77	0.8177	0.86	1	T	0.0	B	0.0	B	.	.	1.000	P	0	N	-1.39	T	-0.953	T	0.000	T	0.015	-0.838	0.579	-6.3	-2.111	-0.307	0.525	-0.837956	NA	1	0.862799	0.805542	NA	0.87	NA	6.7820344
974	19	52471872	52471872	A	G	exonic	ZNF350	NA	nonsynonymous SNV	ZNF350:NM_021632:exon4:c.T197C:p.L66P	exonic	ENSG00000256683	NA	nonsynonymous SNV	ENSG00000256683:ENST00000243644:exon4:c.T197C:p.L66P,ENSG00000256683:ENST00000601430:exon4:c.T89C:p.L30P,ENSG00000256683:ENST00000594929:exon5:c.T197C:p.L66P	NA	NA	19q13.41	NA	NA	NA	NA	rs2278420	0.25	0.25	0.249	0.266973	0.1889	0.2371	0.1801	0.3744	0.2945	0.2	0.21	0.18	0.41	0.2079	0.41	1	T	0.0	B	0.0	B	.	.	1.000	P	-1.495	N	3.74	T	-0.950	T	0.000	T	0.029	-3.173	0.001	0.908	-0.194	-0.105	2.750	-3.172985	NA	0.47	0.155814	0.375397	NA	0.261	NA	6.7807194
974	11	86807104	86807104	C	A	intronic	TMEM135	NA	NA	NA	ncRNA_exonic	ENSG00000254843	NA	NA	NA	Score=420;Name=lod=68	NA	11q14.2	NA	Name=Rad21,CTCF	Name=34	NA	rs2445552	0.75	0.75	0.742	0.751597	0.5527	0.8869	0.7104	0.9334	0.6002	0.55	0.9	0.67	0.95	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.61676	NA	NA	NA	NA	NA	0.674	NA	6.7806333
974	17	57287454	57287454	A	G	exonic	SMG8	NA	synonymous SNV	SMG8:NM_018149:exon1:c.A42G:p.A14A	exonic	ENSG00000167447	NA	synonymous SNV	ENSG00000167447:ENST00000300917:exon1:c.A42G:p.A14A,ENSG00000167447:ENST00000578922:exon1:c.A42G:p.A14A,ENSG00000167447:ENST00000543872:exon2:c.A42G:p.A14A	NA	Name=Circulating myeloperoxidase levels (plasma)	17q22	NA	Name=POU2F2,WHIP,GABP,TAF1,Znf143_(16618-1-AP),TAF7_(SQ-8),YY1_(C-20),TR4,USF1_(SC-8983),IRF4_(M-17),MEF2A,GATA3_(SC-268),SP1,NRSF,Pol2,Pol2(phosphoS2),HNF4G_(SC-6558),Oct-2,GR,ELF1_(SC-631),BATF,CHD2_(N-1250),GTF2F1_(RAP-74),CEBPB,BHLHE40,p300,ELK4,ZZZ3,FOSL2,Pol2(b),Sin3Ak-20,Pol2-4H8,ZNF263,HDAC2_(SC-6296),KAP1,RFX5_(N-494),YY1,STAT3,SIX5,SETDB1,c-Myc,NFKB,HEY1,STAT2,TBP,IRF1,TCF12,USF-1	Name=147	NA	rs6503905	0.65	0.65	0.656	0.664137	0.6183	0.4415	0.5562	0.9546	0.6247	0.62	0.46	0.59	0.94	0.6332	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.760799	NA	NA	0.634535	0.889242	NA	0.659	NA	6.7806316
974	11	118560857	118560857	G	A	intergenic	TREH,DDX6	dist=10476;dist=57616	NA	NA	ncRNA_exonic	ENSG00000255239	NA	NA	NA	NA	NA	11q23.3	Score=687;Name=V$BRACH_01	Name=CTCF,ELF1_(SC-631),GATA3_(SC-268),NRSF,CCNT2,AP-2gamma,HA-E2F1,GATA-2,STAT3,AP-2alpha,HSF1	Name=148	NA	rs73001406	0.21	0.21	0.203	0.229233	0.2197	0.253	0.1945	0.1301	0.3732	0.19	0.27	0.22	0.14	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.370384	NA	NA	NA	NA	NA	0.217	NA	6.7803
974	19	15027982	15027982	G	A	intergenic	OR7A17,OR7C2	dist=35815;dist=24319	NA	NA	ncRNA_exonic	ENSG00000198367	NA	NA	NA	Score=325;Name=lod=28	NA	19p13.12	NA	Name=CTCF	Name=5	NA	rs4427933	0.17	0.17	0.163	0.171925	0.2207	0.0258	0.2118	0.2716	0.1094	0.22	0.02	0.21	0.25	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.652918	1.652918	NA	NA	NA	NA	0.217	NA	6.7793
974	3	49701983	49701983	G	A	exonic	BSN	NA	synonymous SNV	BSN:NM_003458:exon9:c.G11736A:p.T3912T	exonic	ENSG00000164061	NA	synonymous SNV	ENSG00000164061:ENST00000296452:exon9:c.G11736A:p.T3912T	Score=484;Name=lod=124	Name=Ulcerative colitis,Crohn's disease	3p21.31	NA	NA	NA	NA	rs9858542	0.22	0.22	0.201	0.195288	0.3241	0.0516	0.17	0.2171	0.1994	0.33	0.06	0.23	0.24	0.2646	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.069619	NA	NA	0.299651	0.23695	NA	0.304	NA	6.7783156
974	7	64863392	64863392	C	T	exonic	ZNF92	NA	nonsynonymous SNV	ZNF92:NM_007139:exon3:c.C158T:p.A53V,ZNF92:NM_152626:exon4:c.C365T:p.A122V	exonic	ENSG00000146757	NA	nonsynonymous SNV	ENSG00000146757:ENST00000431504:exon2:c.C137T:p.A46V,ENSG00000146757:ENST00000357512:exon3:c.C269T:p.A90V,ENSG00000146757:ENST00000450302:exon3:c.C158T:p.A53V,ENSG00000146757:ENST00000328747:exon4:c.C365T:p.A122V	NA	NA	7q11.21	NA	NA	NA	NA	rs10265083	0.31	0.31	0.306	0.331869	0.161	0.3145	0.4164	0.5234	0.2065	0.15	0.31	0.35	0.53	0.2298	0.53	0.2	T	0.394	B	0.119	B	.	.	1.000	P	0	N	3.57	T	-1.003	T	0.000	T	0.07	0.29	5.57	-0.854	-0.514	0.049	5.009	0.289954	NA	0.04	0.164884	0.449614	NA	0.246	NA	6.7776494
974	21	44270229	44270229	C	T	exonic	WDR4	NA	nonsynonymous SNV	WDR4:NM_001260474:exon11:c.G1166A:p.R389Q,WDR4:NM_001260475:exon11:c.G731A:p.R244Q,WDR4:NM_001260476:exon11:c.G731A:p.R244Q,WDR4:NM_001260477:exon11:c.G731A:p.R244Q,WDR4:NM_018669:exon11:c.G1169A:p.R390Q,WDR4:NM_033661:exon11:c.G1169A:p.R390Q	exonic	ENSG00000160193	NA	nonsynonymous SNV	ENSG00000160193:ENST00000330317:exon11:c.G1169A:p.R390Q,ENSG00000160193:ENST00000398208:exon11:c.G1169A:p.R390Q	NA	NA	21q22.3	NA	NA	NA	NA	rs6586250	0.22	0.22	0.244	0.233427	0.1779	0.0734	0.1513	0.4811	0.1789	0.17	0.08	0.17	0.48	0.1888	0.48	0.72	T	0.021	B	0.002	B	0.396	N	1.000	P	-0.295	N	-0.0	T	-1.003	T	0.000	T	0.107	-0.395	2.15	-1.78	-0.438	-0.223	6.153	-0.394655	NA	0.61	0.18907	0.435996	NA	0.275	NA	6.7775634
974	19	10939792	10939792	T	C	exonic	DNM2	NA	synonymous SNV	DNM2:NM_001005362:exon18:c.T2127C:p.A709A,DNM2:NM_004945:exon18:c.T2127C:p.A709A,DNM2:NM_001005360:exon19:c.T2139C:p.A713A,DNM2:NM_001005361:exon19:c.T2139C:p.A713A,DNM2:NM_001190716:exon19:c.T2139C:p.A713A	exonic	ENSG00000079805	NA	synonymous SNV	ENSG00000079805:ENST00000359692:exon18:c.T2127C:p.A709A,ENSG00000079805:ENST00000408974:exon18:c.T2127C:p.A709A,ENSG00000079805:ENST00000314646:exon19:c.T2139C:p.A713A,ENSG00000079805:ENST00000355667:exon19:c.T2139C:p.A713A,ENSG00000079805:ENST00000389253:exon19:c.T2139C:p.A713A,ENSG00000079805:ENST00000585892:exon19:c.T2139C:p.A713A	NA	NA	19p13.2	NA	Name=CTCF_(SC-5916),ZBTB33,CTCF	Name=8	NA	rs2229920	0.37	0.37	0.354	0.338259	0.2873	0.5595	0.2695	0.2617	0.3149	0.3	0.6	0.27	0.3	0.3115	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.764228	NA	NA	0.291163	0.260554	NA	0.297	NA	6.7767036
974	4	104061993	104061993	C	G	exonic	CENPE	NA	nonsynonymous SNV	CENPE:NM_001813:exon36:c.G5732C:p.S1911T	exonic	ENSG00000138778	NA	nonsynonymous SNV	ENSG00000138778:ENST00000380026:exon35:c.G5657C:p.S1886T,ENSG00000138778:ENST00000265148:exon36:c.G5732C:p.S1911T	NA	NA	4q24	NA	NA	NA	NA	rs1381657	0.17	0.17	0.164	0.210863	0.1799	0.1548	0.2176	0.1831	0.3333	0.17	0.14	0.21	0.18	0.1932	0.21	0.19	T	0.247	B	0.092	B	.	.	1.000	P	0.255	N	-0.65	T	-1.099	T	0.000	T	0.021	-0.461	1.869	-1.34	-0.150	-0.757	9.766	-0.460761	NA	0.53	0.183721	0.177031	NA	0.261	NA	6.7765124
974	14	74203789	74203789	G	A	exonic	ELMSAN1	NA	nonsynonymous SNV	ELMSAN1:NM_001043318:exon3:c.C1661T:p.P554L,ELMSAN1:NM_194278:exon3:c.C1661T:p.P554L	exonic	ENSG00000156030	NA	nonsynonymous SNV	ENSG00000156030:ENST00000423556:exon2:c.C1661T:p.P554L,ENSG00000156030:ENST00000451078:exon2:c.C1127T:p.P376L,ENSG00000156030:ENST00000286523:exon3:c.C1661T:p.P554L,ENSG00000156030:ENST00000394071:exon3:c.C1661T:p.P554L,ENSG00000156030:ENST00000435371:exon3:c.C1661T:p.P554L	NA	NA	14q24.3	NA	NA	NA	NA	rs17782124	0.14	0.14	0.133	0.152955	0.1839	0.1409	0.1182	0.0507	0.2965	0.18	0.14	0.13	0.07	0.1795	0.19	0.21	T	0.0	B	0.0	B	0.923	N	1.000	P	0	N	2.44	T	-0.941	T	0.000	T	0.278	0.996	9.069	-0.259	-0.216	0.506	3.679	0.996364	NA	0.31	0.193837	0.064458	NA	0.101	NA	6.7760964
974	3	119222456	119222456	G	C	exonic	TIMMDC1	NA	synonymous SNV	TIMMDC1:NM_016589:exon3:c.G438C:p.V146V	exonic	ENSG00000113845	NA	stoploss	ENSG00000113845:ENST00000492164:exon2:c.G272C:p.X91S	Score=415;Name=lod=65	NA	3q13.33	NA	NA	NA	NA	rs1131265	0.21	0.21	0.187	0.207268	0.164	0.3562	0.0994	0.1747	0.2188	0.16	0.34	0.13	0.19	0.2088	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.602739	NA	NA	0.184884	0.207444	ID=COSM149452;OCCURENCE=1(stomach)	0.094	NA	6.7756493
974	1	25889632	25889632	T	C	exonic	LDLRAP1	NA	nonsynonymous SNV	LDLRAP1:NM_015627:exon6:c.T604C:p.S202P	exonic	ENSG00000157978	NA	nonsynonymous SNV	ENSG00000157978:ENST00000374338:exon6:c.T604C:p.S202P	NA	NA	1p36.11	NA	NA	NA	NA	rs6687605	0.46	0.46	0.419	0.434904	0.5239	0.4425	0.5101	0.3207	0.4366	0.49	0.5	0.48	0.34	0.5011	0.53	0.3	T	0.079	B	0.048	B	0.252	N	1.000	P	1.655	L	0.36	T	-0.928	T	0.000	T	0.023	1.574	11.22	-2.44	-0.325	-0.615	2.213	1.573662	1.573662	0.07	0.533155	0.344757	NA	0.254	NA	6.7751784
975	6	145051594	145051594	G	A	exonic	UTRN	NA	synonymous SNV	UTRN:NM_007124:exon53:c.G7911A:p.E2637E	exonic	ENSG00000152818	NA	synonymous SNV	ENSG00000152818:ENST00000367526:exon4:c.G576A:p.E192E,ENSG00000152818:ENST00000367545:exon53:c.G7911A:p.E2637E	Score=570;Name=lod=276	NA	6q24.2	NA	NA	Name=10	NA	rs4305737	0.6	0.6	0.621	0.642772	0.2286	0.8681	0.6225	0.9123	0.4867	0.23	0.86	0.57	0.9	0.411	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.750082	NA	NA	0.252791	0.789605	NA	0.413	NA	6.7742756
975	17	8053085	8053085	T	G	exonic	PER1	NA	synonymous SNV	PER1:NM_002616:exon5:c.A639C:p.T213T	exonic	ENSG00000179094	NA	synonymous SNV	ENSG00000179094:ENST00000581082:exon4:c.A639C:p.T213T,ENSG00000179094:ENST00000317276:exon5:c.A639C:p.T213T,ENSG00000179094:ENST00000354903:exon5:c.A591C:p.T197T,ENSG00000179094:ENST00000581395:exon5:c.A639C:p.T213T,ENSG00000179094:ENST00000582719:exon5:c.A639C:p.T213T	NA	NA	17p13.1	NA	Name=Pol2	Name=2	NA	rs3027178	0.33	0.33	0.322	0.286741	0.2922	0.2738	0.4553	0.267	0.2014	0.3	0.31	0.42	0.33	0.2937	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.346724	NA	NA	0.306512	0.257149	ID=COSM148188;OCCURENCE=1(stomach)	0.254	NA	6.7742546
975	7	45004063	45004063	T	C	exonic	MYO1G	NA	nonsynonymous SNV	MYO1G:NM_033054:exon19:c.A2582G:p.Q861R	exonic	ENSG00000136286	NA	nonsynonymous SNV	ENSG00000136286:ENST00000258787:exon19:c.A2582G:p.Q861R	NA	NA	7p13	NA	NA	Name=48	NA	rs7792760	0.89	0.89	0.898	0.901558	0.8489	0.8938	0.8588	0.9841	0.8824	0.84	0.91	0.85	0.99	0.8687	0.99	0.73	T	0.0	B	0.001	B	0.384	N	1.000	P	-1.265	N	-2.16	D	-0.981	T	0.000	T	0.037	-2.127	0.005	-0.409	-0.232	0.372	9.293	-2.12685	NA	0.65	0.84186	0.963459	NA	0.964	NA	6.7738734
975	17	42398802	42398802	G	A	exonic	SLC25A39	NA	synonymous SNV	SLC25A39:NM_001143780:exon7:c.C517T:p.L173L,SLC25A39:NM_016016:exon7:c.C493T:p.L165L	exonic	ENSG00000013306	NA	nonsynonymous SNV	ENSG00000013306:ENST00000593166:exon1:c.C91T:p.R31C	NA	NA	17q21.31	NA	NA	Name=3	NA	rs34365655	0.04	0.04	0.041	0.0263578	0.0855	NA	0.0231	0.0091	0.0184	0.09	NA	0.03	0.02	0.0609	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.177439	NA	NA	0.081977	0.018157	NA	0.022	NA	6.771623
975	19	35836530	35836530	G	A	exonic	CD22	NA	nonsynonymous SNV	CD22:NM_001185101:exon10:c.G1703A:p.G568D,CD22:NM_001185099:exon11:c.G1970A:p.G657D,CD22:NM_001771:exon12:c.G2234A:p.G745D	exonic	ENSG00000012124	NA	nonsynonymous SNV	ENSG00000012124:ENST00000594250:exon9:c.G1703A:p.G568D,ENSG00000012124:ENST00000341773:exon10:c.G1703A:p.G568D,ENSG00000012124:ENST00000419549:exon11:c.G1718A:p.G573D,ENSG00000012124:ENST00000536635:exon11:c.G1970A:p.G657D,ENSG00000012124:ENST00000085219:exon12:c.G2234A:p.G745D	NA	NA	19q13.12	NA	NA	NA	NA	rs10406069	0.14	0.14	0.132	0.1248	0.1849	0.2153	0.1311	0.0514	0.0644	0.18	0.19	0.14	0.03	0.1699	0.21	0.09	T	0.289	B	0.07	B	0.661	N	1.000	P	0.69	N	1.08	T	-1.059	T	0.000	T	0.096	1.51	11	-1.39	0.100	-0.119	4.982	1.510191	1.510191	0.02	0.207093	0.071266	NA	0.217	NA	6.7714404
975	8	134108546	134108546	T	C	exonic	TG	NA	nonsynonymous SNV	TG:NM_003235:exon43:c.T7501C:p.W2501R	exonic	ENSG00000042832	NA	nonsynonymous SNV	ENSG00000042832:ENST00000519543:exon14:c.T1900C:p.W634R,ENSG00000042832:ENST00000542445:exon22:c.T2611C:p.W871R,ENSG00000042832:ENST00000377869:exon42:c.T7330C:p.W2444R,ENSG00000042832:ENST00000220616:exon43:c.T7501C:p.W2501R	NA	NA	8q24.22	NA	NA	NA	NA	rs2069569	0.52	0.52	0.525	0.522364	0.5328	0.2302	0.5086	0.8275	0.41	0.53	0.21	0.53	0.84	0.5024	0.84	0.3	T	0.0	B	0.0	B	0.651	N	1.000	P	-0.935	N	-0.2	T	-1.000	T	0.000	T	0.505	-1.495	0.017	2.0	0.197	-0.018	5.290	-1.494739	NA	0.45	0.527093	0.785747	NA	0.58	NA	6.7710404
975	1	40733658	40733658	A	G	intronic	ZMPSTE24	NA	NA	NA	intronic	ENSG00000084073	NA	NA	NA	NA	NA	1p34.2	NA	Name=STAT3	Name=104	NA	rs7516571	0.22	0.22	0.204	0.222644	0.2296	0.2212	0.1859	0.2708	0.1779	0.25	0.21	0.15	0.26	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.036631	NA	NA	NA	NA	NA	0.261	CLINSIG=untested;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000128739.1;CLNDSDB=.;CLNDSDBID=.	6.7704
975	5	32522994	32522994	A	G	intergenic	ZFR,SUB1	dist=78150;dist=62611	NA	NA	ncRNA_exonic	ENSG00000249142	NA	NA	NA	Score=605;Name=lod=385	NA	5p13.3	NA	Name=Pol2	Name=84	NA	rs17439827	0.16	0.16	0.138	0.139377	0.2296	0.124	0.1671	0.0265	0.1953	0.22	0.15	0.22	0.03	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.162057	NA	NA	NA	NA	NA	0.196	NA	6.7704
975	8	23058220	23058220	T	G	exonic	TNFRSF10A	NA	nonsynonymous SNV	TNFRSF10A:NM_003844:exon5:c.A683C:p.E228A	exonic	ENSG00000104689	NA	nonsynonymous SNV	ENSG00000104689:ENST00000221132:exon5:c.A683C:p.E228A,ENSG00000104689:ENST00000524158:exon5:c.A77C:p.E26A	NA	NA	8p21.3	NA	NA	NA	NA	rs20576	0.11	0.11	0.077	0.0816693	0.2157	0.0119	0.1441	0.0053	0.0746	0.21	0.01	0.18	0.01	0.1491	0.21	0.08	T	0.308	B	0.193	B	0.796	N	1.000	P	1.04	L	1.49	T	-1.001	T	0.001	T	0.157	1.199	9.872	0.625	0.010	0.872	5.233	1.199087	NA	0.02	0.2	0.046981	NA	0.094	NA	6.7685334
975	12	52712975	52712975	G	A	exonic	KRT83	NA	synonymous SNV	KRT83:NM_002282:exon2:c.C558T:p.N186N	exonic	ENSG00000170523	NA	synonymous SNV	ENSG00000170523:ENST00000293670:exon2:c.C558T:p.N186N	Score=563;Name=lod=260	NA	12q13.13	NA	NA	NA	NA	rs3741715	0.37	0.37	0.356	0.36262	0.2823	0.506	0.3386	0.3654	0.3108	0.28	0.5	0.36	0.36	0.3231	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.163955	NA	NA	0.296163	0.364503	NA	0.203	CLINSIG=untested;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000056955.1;CLNDSDB=.;CLNDSDBID=.	6.7651036
976	2	68592315	68592315	A	C	upstream	PLEK	NA	NA	NA	ncRNA_UTR5	ENSG00000115956	NA	NA	NA	NA	NA	2p14	Score=725;Name=V$PPARG_01	Name=TAF1,POU2F2,PU.1,Pol2,YY1,Pol2-4H8,Max,NFKB,ELF1_(SC-631),Oct-2,TBP	Name=18	NA	rs3732046	0.58	0.58	0.57	0.625	0.4036	0.7609	0.611	0.6952	0.6278	0.41	0.74	0.59	0.65	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.529819	2.529819	NA	NA	NA	NA	0.551	NA	6.7630666
976	11	5877979	5877979	T	A	exonic	OR52E8	NA	stoploss	OR52E8:NM_001005168:exon1:c.A954T:p.X318Y	exonic	ENSG00000183269	NA	stoploss	ENSG00000183269:ENST00000537935:exon1:c.A954T:p.X318Y	NA	NA	11p15.4	NA	NA	NA	NA	rs12419602	0.39	0.39	0.388	0.3748	0.4085	0.373	0.4135	0.3737	0.316	0.42	0.37	0.43	0.32	0.406	0.43	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	.	.	.	.	.	-0.399	2.13	-1.13	-0.300	-0.134	3.918	-0.399348	NA	0.41	0.423301	0.385173	NA	0.384	NA	6.762199
976	22	39178701	39178701	A	G	exonic	DNAL4	NA	synonymous SNV	DNAL4:NM_005740:exon2:c.T36C:p.D12D	exonic	ENSG00000100246	NA	synonymous SNV	ENSG00000100246:ENST00000216068:exon2:c.T36C:p.D12D,ENSG00000100246:ENST00000406199:exon2:c.T36C:p.D12D	Score=575;Name=lod=289	NA	22q13.1	NA	NA	Name=78	NA	rs760482	0.39	0.39	0.404	0.41254	0.2734	0.6925	0.245	0.4206	0.3753	0.27	0.68	0.2	0.39	0.3309	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.304236	1.304236	NA	0.301279	0.376305	NA	0.283	NA	6.7610876
976	17	44344810	44344810	T	G	intergenic	KANSL1,LRRC37A	dist=42070;dist=27687	NA	NA	ncRNA_exonic	ENSG00000261575	NA	NA	NA	Score=557;Name=lod=245	NA	17q21.31	NA	Name=ZEB1_(SC-25388),ZNF263,GR,CTCF,E2F6_(H-50),TAF1	Name=148	NA	rs2732649	0.12	0.12	0.142	0.0866613	0.2396	0.001	0.1556	0.0166	0.0634	0.23	0.0017	0.19	0.02	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.532554	1.532554	NA	NA	NA	NA	0.109	NA	6.7604
976	17	74270258	74270258	C	A	UTR3	QRICH2	NM_032134:c.*59G>T	NA	NA	exonic	ENSG00000129646	NA	synonymous SNV	ENSG00000129646:ENST00000447564:exon11:c.G1374T:p.P458P	NA	NA	17q25.1	NA	Name=CEBPB	Name=4	NA	rs73350373	0.09	0.09	0.073	0.110224	0.0736	0.003	0.2046	0.1868	0.0879	0.07	0.0017	0.18	0.16	0.0886	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.049095	NA	NA	0.078567	0.182081	NA	0.138	NA	6.759233
976	14	24897206	24897206	C	G	intronic	CBLN3	NA	NA	NA	intronic	ENSG00000139899	NA	NA	NA	Score=558;Name=lod=247	NA	14q12	Score=882;Name=V$MAZR_01	Name=HNF4G_(SC-6558),USF-1	NA	NA	rs10140312	0.05	0.05	0.047	0.057508	0.0775	0.001	0.0821	0.0719	0.0583	0.06	NA	0.09	0.08	0.0756	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.920664	1.920664	NA	0.08814	0.078075	NA	0.152	NA	6.75876
976	18	56204945	56204945	C	G	exonic	ALPK2	NA	nonsynonymous SNV	ALPK2:NM_052947:exon5:c.G2474C:p.R825T	exonic	ENSG00000198796	NA	nonsynonymous SNV	ENSG00000198796:ENST00000361673:exon5:c.G2474C:p.R825T	NA	NA	18q21.32	NA	Name=Pol2-4H8	NA	NA	rs3809972	0.44	0.44	0.44	0.404153	0.5726	0.2361	0.4294	0.4312	0.3497	0.59	0.24	0.51	0.38	0.4687	0.59	0.4	T	0.0	B	0.0	B	0.415	N	1.000	P	-0.345	N	1.11	T	-0.927	T	0.000	T	0.029	-0.694	0.989	1.3	0.072	-0.435	5.508	-0.694484	NA	0	0.533605	0.450295	NA	0.522	NA	6.7584284
976	14	75367807	75367807	C	T	exonic	DLST	NA	synonymous SNV	DLST:NM_001933:exon14:c.C1098T:p.G366G	exonic	ENSG00000119689	NA	synonymous SNV	ENSG00000119689:ENST00000334212:exon11:c.C840T:p.G280G,ENSG00000119689:ENST00000334220:exon14:c.C1098T:p.G366G	Score=618;Name=lod=432	NA	14q24.3	Score=850;Name=V$CDPCR1_01	NA	NA	NA	rs20578	0.29	0.29	0.269	0.284145	0.2962	0.2202	0.2349	0.3404	0.2965	0.3	0.25	0.27	0.34	0.3036	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.852072	NA	NA	0.308488	0.340445	NA	0.188	NA	6.7583786
976	2	60687959	60687959	A	G	exonic	BCL11A	NA	synonymous SNV	BCL11A:NM_018014:exon4:c.T2088C:p.S696S,BCL11A:NM_022893:exon4:c.T2088C:p.S696S	exonic	ENSG00000119866	NA	synonymous SNV	ENSG00000119866:ENST00000358510:exon3:c.T1986C:p.S662S,ENSG00000119866:ENST00000538214:exon3:c.T1986C:p.S662S,ENSG00000119866:ENST00000335712:exon4:c.T2088C:p.S696S,ENSG00000119866:ENST00000356842:exon4:c.T2088C:p.S696S,ENSG00000119866:ENST00000537768:exon6:c.T1095C:p.S365S	Score=935;Name=lod=8412	NA	2p16.1	Score=834;Name=V$IRF2_01	NA	NA	Score=86;Name=1224132.2_0_-_86	rs7569946	0.8	0.8	0.785	0.830072	0.5984	0.998	0.7738	0.9486	0.7751	0.59	1	0.73	0.93	0.6977	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.330888	NA	NA	0.612494	0.907769	NA	0.681	NA	6.7580726
976	3	186006618	186006618	G	C	exonic	DGKG	NA	nonsynonymous SNV	DGKG:NM_001080744:exon6:c.C425G:p.T142S,DGKG:NM_001080745:exon6:c.C425G:p.T142S,DGKG:NM_001346:exon6:c.C425G:p.T142S	exonic	ENSG00000058866	NA	nonsynonymous SNV	ENSG00000058866:ENST00000265022:exon6:c.C425G:p.T142S,ENSG00000058866:ENST00000344484:exon6:c.C425G:p.T142S,ENSG00000058866:ENST00000382164:exon6:c.C425G:p.T142S,ENSG00000058866:ENST00000544847:exon6:c.C425G:p.T142S	NA	NA	3q27.3	NA	NA	NA	NA	rs1004588	0.54	0.54	0.502	0.51897	0.5318	0.6081	0.5101	0.4387	0.5286	0.54	0.63	0.48	0.49	0.527	0.63	0.96	T	0.002	B	0.009	B	0.914	N	1.000	P	0.345	N	1.0	T	-0.922	T	0.000	T	0.057	-0.09	3.558	2.16	0.191	.	5.379	-0.090221	NA	0.99	0.517093	0.437812	NA	0.623	NA	6.7574404
976	8	144620855	144620855	C	A	exonic	ZC3H3	NA	nonsynonymous SNV	ZC3H3:NM_015117:exon2:c.G682T:p.A228S	exonic	ENSG00000014164	NA	nonsynonymous SNV	ENSG00000014164:ENST00000262577:exon2:c.G682T:p.A228S	NA	NA	8q24.3	NA	NA	NA	NA	rs4873802	0.14	0.14	0.134	0.149361	0.1978	0.0804	0.2536	0.0348	0.2515	0.21	0.09	0.23	0.03	0.1941	0.23	0.79	T	0.068	B	0.009	B	0.441	N	1.000	P	1.52	L	3.87	T	-0.916	T	0.000	T	0.044	-0.138	3.323	0.477	0.147	-0.131	3.828	-0.138368	NA	0.13	0.184125	0.063951	NA	0.152	NA	6.7573084
976	6	32609105	32609105	G	A	exonic	HLA-DQA1	NA	nonsynonymous SNV	HLA-DQA1:NM_002122:exon2:c.G101A:p.C34Y	exonic	ENSG00000196735	NA	nonsynonymous SNV	ENSG00000196735:ENST00000343139:exon2:c.G101A:p.C34Y,ENSG00000196735:ENST00000374949:exon2:c.G101A:p.C34Y,ENSG00000196735:ENST00000395363:exon2:c.G101A:p.C34Y,ENSG00000196735:ENST00000496318:exon2:c.G101A:p.C34Y	NA	NA	6p21.32	NA	Name=Pol2-4H8	NA	NA	rs1129740	0.53	0.53	0.48	0.523163	0.5547	0.4623	0.6758	0.503	0.4724	0.53	0.52	0.65	0.45	0.5571	0.65	1	T	0.004	B	0.015	B	0.632	N	1.000	P	-2.295	N	6.12	T	-0.963	T	0.003	T	0.608	-2.228	0.005	-0.275	-0.454	0.118	1.086	-2.227569	NA	1	0.465409	0.423513	NA	0.232	NA	6.7561244
977	7	157396697	157396697	G	A	exonic	PTPRN2	NA	synonymous SNV	PTPRN2:NM_130842:exon15:c.C2364T:p.P788P,PTPRN2:NM_130843:exon15:c.C2328T:p.P776P,PTPRN2:NM_002847:exon16:c.C2415T:p.P805P	exonic	ENSG00000155093	NA	synonymous SNV	ENSG00000155093:ENST00000389413:exon15:c.C2328T:p.P776P,ENSG00000155093:ENST00000389416:exon15:c.C2364T:p.P788P,ENSG00000155093:ENST00000409483:exon15:c.C2301T:p.P767P,ENSG00000155093:ENST00000389418:exon16:c.C2415T:p.P805P,ENSG00000155093:ENST00000404321:exon16:c.C2484T:p.P828P	Score=530;Name=lod=190	NA	7q36.3	Score=797;Name=V$GFI1_01	NA	NA	NA	rs17853260	0.15	0.15	0.15	0.119609	0.334	0.006	0.1628	0.0129	0.1299	0.33	0.01	0.19	0.01	0.2395	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.137564	NA	NA	0.338372	0.068089	ID=COSM452796;OCCURENCE=1(breast)	0.138	NA	6.7547946
977	22	46644168	46644168	A	G	exonic	CDPF1	NA	nonsynonymous SNV	CDPF1:NM_207327:exon2:c.T14C:p.V5A	exonic	ENSG00000205643	NA	nonsynonymous SNV	ENSG00000205643:ENST00000404583:exon1:c.T14C:p.V5A,ENSG00000205643:ENST00000404744:exon1:c.T14C:p.V5A,ENSG00000205643:ENST00000314567:exon2:c.T14C:p.V5A,ENSG00000205643:ENST00000381037:exon2:c.T14C:p.V5A	NA	NA	22q13.31	NA	NA	NA	NA	rs9627281	0.26	0.26	0.286	0.279153	0.1938	0.001	0.1686	0.7602	0.0818	0.18	NA	0.19	0.73	0.2028	0.73	1	T	0.0	B	0.0	B	0.656	N	1.000	P	-1.39	N	1.72	T	-0.936	T	0.000	T	0.016	-1.029	0.22	0.371	0.288	0.533	1.612	-1.02907	NA	0.56	0.182674	0.688833	NA	0.391	NA	6.7540594
977	11	60198328	60198328	C	T	exonic	MS4A5	NA	synonymous SNV	MS4A5:NM_023945:exon2:c.C213T:p.T71T	exonic	ENSG00000166930	NA	synonymous SNV	ENSG00000166930:ENST00000300190:exon2:c.C213T:p.T71T,ENSG00000166930:ENST00000533885:exon2:c.C213T:p.T71T	NA	NA	11q12.2	NA	NA	NA	NA	rs708229	0.33	0.33	0.357	0.313698	0.3131	0.2004	0.3069	0.4796	0.2117	0.31	0.25	0.34	0.47	0.2899	0.47	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.908	T	0.000	T	.	-1.612	0.013	-2.16	-0.301	-0.279	5.459	-1.612083	NA	NA	0.310188	0.416704	NA	0.413	NA	6.7534786
977	3	149686076	149686076	T	C	intronic	PFN2	NA	NA	NA	UTR3	ENSG00000070087	ENST00000461930:c.*249A>G,ENST00000461868:c.*61A>G	NA	NA	Score=272;Name=lod=17	NA	3q25.1	NA	Name=Pol2-4H8,Pol2	Name=46	NA	rs2305855	0.37	0.37	0.325	0.35004	0.4135	0.6161	0.3501	0.0446	0.4233	0.41	0.63	0.35	0.04	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.139896	2.139896	NA	NA	NA	NA	0.348	NA	6.7531667
977	1	93306317	93306317	G	A	ncRNA_exonic	SNORA66	NA	NA	NA	ncRNA_exonic	ENSG00000207523	NA	NA	NA	Score=545;Name=lod=218	NA	1p22.1	Score=852;Name=V$RFX1_02	Name=Pol2-4H8	Name=3	NA	rs10874744	0.68	0.68	0.676	0.691893	0.6223	0.9603	0.6902	0.4554	0.8078	0.63	0.95	0.63	0.47	0.677	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.997431	1.997431	NA	0.614264	0.466324	NA	0.543	NA	6.7531026
977	6	152489294	152489294	T	C	intronic	SYNE1	NA	NA	NA	exonic	ENSG00000131018	NA	nonsynonymous SNV	ENSG00000131018:ENST00000354674:exon1:c.A46G:p.S16G,ENSG00000131018:ENST00000539504:exon1:c.A46G:p.S16G	Score=480;Name=lod=119	NA	6q25.1	NA	NA	NA	NA	rs998147	0.85	0.85	0.846	0.867013	0.7674	0.8889	0.8487	0.9455	0.8538	0.75	0.9	0.83	0.94	0.8278	0.94	0.66	T	.	.	.	.	.	.	0.000	P	.	.	4.66	T	-0.952	T	0.001	T	0.023	-0.458	1.881	2.24	-0.056	-1.106	6.798	-0.45797	NA	0.65	0.819219	0.93271	NA	0.906	NA	6.7522477
977	11	130784647	130784647	G	C	exonic	SNX19	NA	nonsynonymous SNV	SNX19:NM_014758:exon1:c.C1188G:p.D396E	exonic	ENSG00000120451	NA	nonsynonymous SNV	ENSG00000120451:ENST00000265909:exon1:c.C1188G:p.D396E,ENSG00000120451:ENST00000533214:exon1:c.C1188G:p.D396E	NA	NA	11q24.3	NA	NA	NA	NA	rs1050081	0.14	0.14	0.146	0.127596	0.1988	0.1538	0.0893	0.0492	0.1605	0.21	0.17	0.1	0.05	0.1745	0.21	1	T	0.003	B	0.004	B	0.525	N	0.000	P	0.255	N	2.09	T	-0.948	T	0.000	T	0.052	0.787	8.151	0.82	0.005	0.207	7.663	0.787417	NA	0.6	0.207936	0.071558	NA	0.21	NA	6.7520974
977	6	41029342	41029342	T	C	exonic	APOBEC2	NA	nonsynonymous SNV	APOBEC2:NM_006789:exon2:c.T407C:p.I136T	exonic	ENSG00000124701	NA	nonsynonymous SNV	ENSG00000124701:ENST00000244669:exon2:c.T407C:p.I136T	NA	NA	6p21.1	NA	NA	NA	NA	rs2076472	0.17	0.17	0.144	0.177316	0.168	0.2679	0.2277	0.0068	0.2883	0.17	0.26	0.22	0.01	0.2106	0.26	0.06	T	0.0	B	0.002	B	0.214	N	1.000	P	0	N	0.79	T	-1.058	T	0.025	T	0.071	1.063	9.339	1.37	0.320	0.274	5.875	1.062585	NA	0	0.20314	0.040399	NA	0.072	NA	6.7515934
977	19	49542078	49542078	A	G	intergenic	SNAR-G1,CGB5	dist=1674;dist=5024	NA	NA	ncRNA_exonic	ENSG00000267685	NA	NA	NA	Score=579;Name=lod=302	NA	19q13.33	NA	Name=BCL3,JunD,FOSL2,c-Jun,GR,FOSL1_(SC-183)	Name=77	NA	rs4002456	0.2	0.2	0.173	0.19988	0.2505	0.128	0.3069	0.121	0.2526	0.24	0.14	0.28	0.15	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.396596	NA	NA	NA	NA	NA	0.283	NA	6.7495
977	9	87285595	87285595	C	G	UTR5	NTRK2	NM_001018064:c.-69C>G,NM_006180:c.-69C>G,NM_001018065:c.-69C>G,NM_001018066:c.-69C>G,NM_001007097:c.-69C>G	NA	NA	UTR5	ENSG00000148053	ENST00000376213:c.-69C>G,ENST00000376214:c.-69C>G,ENST00000395882:c.-69C>G,ENST00000277120:c.-69C>G,ENST00000304053:c.-69C>G,ENST00000376208:c.-69C>G,ENST00000323115:c.-69C>G,ENST00000359847:c.-69C>G	NA	NA	NA	NA	9q21.33	Score=965;Name=V$MZF1_01	Name=Rad21	Name=8	NA	rs1187325	0.52	0.52	0.468	0.495807	0.5845	0.5764	0.5663	0.2731	0.5726	0.59	0.59	0.55	0.28	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.969063	NA	NA	NA	NA	NA	0.435	NA	6.7488334
977	17	7099811	7099811	G	A	exonic	DLG4	NA	synonymous SNV	DLG4:NM_001128827:exon10:c.C1158T:p.I386I,DLG4:NM_001365:exon12:c.C1296T:p.I432I	exonic	ENSG00000132535	NA	synonymous SNV	ENSG00000132535:ENST00000302955:exon10:c.C1158T:p.I386I,ENSG00000132535:ENST00000399506:exon10:c.C1167T:p.I389I,ENSG00000132535:ENST00000399510:exon12:c.C1296T:p.I432I	Score=521;Name=lod=175	NA	17p13.1	Score=837;Name=V$CDP_02	NA	NA	NA	rs17203281	0.26	0.26	0.253	0.246006	0.331	0.3155	0.2349	0.1831	0.18	0.31	0.29	0.25	0.16	0.282	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.064251	NA	NA	0.305589	0.186753	NA	0.232	NA	6.7480776
977	14	93118669	93118669	G	A	exonic	RIN3	NA	synonymous SNV	RIN3:NM_024832:exon6:c.G1275A:p.T425T	exonic	ENSG00000100599	NA	synonymous SNV	ENSG00000100599:ENST00000216487:exon6:c.G1275A:p.T425T	NA	NA	14q32.12	NA	Name=Pol2,EBF	Name=14	NA	rs3742716	0.28	0.28	0.254	0.238419	0.2883	0.4494	0.2594	0.0295	0.2372	0.3	0.48	0.27	0.03	0.3126	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.189202	NA	NA	0.318372	0.074898	ID=COSM1563046;OCCURENCE=1(large_intestine)	0.333	NA	6.7473946
977	7	106513011	106513011	C	T	exonic	PIK3CG	NA	synonymous SNV	PIK3CG:NM_002649:exon3:c.C2025T:p.S675S	exonic	ENSG00000105851	NA	synonymous SNV	ENSG00000105851:ENST00000359195:exon3:c.C2025T:p.S675S,ENSG00000105851:ENST00000440650:exon3:c.C2025T:p.S675S,ENSG00000105851:ENST00000496166:exon3:c.C2025T:p.S675S	Score=621;Name=lod=445	NA	7q22.3	NA	NA	Name=3	NA	rs1129293	0.26	0.26	0.221	0.253794	0.3141	0.2897	0.428	0.0787	0.2679	0.32	0.28	0.36	0.07	0.3104	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.354677	1.354677	NA	0.295	0.129369	NA	0.167	NA	6.7471666
977	1	10596341	10596341	C	T	exonic	PEX14	NA	synonymous SNV	PEX14:NM_004565:exon3:c.C156T:p.F52F	exonic	ENSG00000142655	NA	synonymous SNV	ENSG00000142655:ENST00000356607:exon3:c.C156T:p.F52F,ENSG00000142655:ENST00000491661:exon3:c.C141T:p.F47F	Score=547;Name=lod=222	NA	1p36.22	NA	Name=CTCF	NA	NA	rs12375	0.23	0.23	0.186	0.228035	0.3141	0.2004	0.4265	0.0658	0.2464	0.3	0.19	0.39	0.05	0.2843	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.314263	1.314263	NA	0.322093	0.107127	NA	0.239	NA	6.7461736
978	10	81841692	81841692	G	T	exonic	TMEM254	NA	nonsynonymous SNV	TMEM254:NM_001270371:exon3:c.G278T:p.C93F,TMEM254:NM_001270374:exon3:c.G203T:p.C68F	exonic	ENSG00000133678	NA	synonymous SNV	ENSG00000133678:ENST00000372274:exon2:c.G183T:p.L61L,ENSG00000133678:ENST00000372275:exon2:c.G183T:p.L61L,ENSG00000133678:ENST00000372277:exon2:c.G183T:p.L61L,ENSG00000133678:ENST00000372281:exon2:c.G183T:p.L61L	NA	NA	10q22.3	Score=688;Name=V$BRACH_01	NA	NA	NA	rs1932574	0.42	0.42	0.405	0.421126	0.4125	0.6865	0.3372	0.2345	0.4683	0.41	0.68	0.33	0.21	0.4152	0.68	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.959	T	0.000	T	.	-0.015	3.937	1.28	0.318	-0.437	8.531	-0.014996	NA	NA	0.427674	0.26759	NA	0.312	NA	6.744626
978	12	56089357	56089357	C	T	exonic	ITGA7	NA	nonsynonymous SNV	ITGA7:NM_001144996:exon14:c.G1964A:p.R655H,ITGA7:NM_001144997:exon14:c.G1673A:p.R558H,ITGA7:NM_002206:exon14:c.G1952A:p.R651H	exonic	ENSG00000135424	NA	nonsynonymous SNV	ENSG00000135424:ENST00000257879:exon14:c.G1952A:p.R651H,ENSG00000135424:ENST00000347027:exon14:c.G1934A:p.R645H,ENSG00000135424:ENST00000394229:exon14:c.G1952A:p.R651H,ENSG00000135424:ENST00000394230:exon14:c.G1964A:p.R655H,ENSG00000135424:ENST00000452168:exon14:c.G1673A:p.R558H,ENSG00000135424:ENST00000553804:exon14:c.G1964A:p.R655H,ENSG00000135424:ENST00000257880:exon15:c.G2084A:p.R695H,ENSG00000135424:ENST00000555728:exon15:c.G2084A:p.R695H	NA	NA	12q13.2	NA	NA	NA	NA	rs1800974	0.59	0.59	0.54	0.599441	0.495	0.9306	0.621	0.3094	0.7423	0.51	0.92	0.58	0.33	0.5854	0.92	0.53	T	0.001	B	0.002	B	0.573	N	1.000	P	0.425	N	0.84	T	-1.002	T	0.000	T	0.246	1.14	9.646	-0.706	-0.033	0.204	9.220	1.140294	NA	0.28	0.508488	0.339764	NA	0.514	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000079979.2;CLNDSDB=.;CLNDSDBID=.	6.7444454
978	11	60703260	60703260	A	G	intronic	TMEM132A	NA	NA	NA	UTR3	ENSG00000006118	ENST00000540112:c.*318A>G	NA	NA	Score=574;Name=lod=286	NA	11q12.2	NA	Name=Pol2,Pol2-4H8	Name=4	NA	rs525574	0.41	0.41	0.424	0.421925	0.4225	0.3165	0.4467	0.4728	0.4438	0.42	0.32	0.45	0.47	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.346119	4.346119	NA	NA	NA	NA	0.493	NA	6.7441667
978	5	153429459	153429459	T	C	exonic	MFAP3	NA	synonymous SNV	MFAP3:NM_001242336:exon2:c.T177C:p.D59D,MFAP3:NM_005927:exon2:c.T177C:p.D59D	exonic	ENSG00000037749	NA	synonymous SNV	ENSG00000037749:ENST00000322602:exon2:c.T177C:p.D59D,ENSG00000037749:ENST00000436816:exon2:c.T177C:p.D59D,ENSG00000037749:ENST00000522177:exon2:c.T177C:p.D59D,ENSG00000037749:ENST00000522782:exon2:c.T177C:p.D59D	Score=489;Name=lod=130	NA	5q33.2	NA	Name=c-Jun,JunD	Name=7	NA	rs690592	0.7	0.7	0.686	0.715056	0.6272	0.8581	0.7147	0.6203	0.7863	0.64	0.86	0.67	0.61	0.6743	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.787512	NA	NA	0.622209	0.647753	NA	0.674	NA	6.7429576
978	11	49059362	49059362	C	A	exonic	TRIM49B	NA	nonsynonymous SNV	TRIM49B:NM_001206626:exon6:c.C1192A:p.L398M	exonic	ENSG00000182053	NA	nonsynonymous SNV	ENSG00000182053:ENST00000332682:exon7:c.C1192A:p.L398M	NA	NA	11p11.12	NA	NA	NA	NA	rs2696914	0.76	0.76	0.756	0.723043	0.8221	0.6022	0.7579	0.882	0.5061	0.79	0.62	0.77	0.85	0.7686	0.85	0.16	T	.	.	.	.	.	.	1.000	P	0.595	N	-0.38	T	-0.903	T	0.000	T	0.117	-2.117	0.006	-1.38	-3.904	-2.242	.	-2.11674	NA	0.32	NA	NA	NA	0.79	NA	6.7426334
978	12	121471337	121471337	G	A	exonic	OASL	NA	synonymous SNV	OASL:NM_001261825:exon2:c.C408T:p.L136L,OASL:NM_003733:exon2:c.C408T:p.L136L,OASL:NM_198213:exon2:c.C408T:p.L136L	exonic	ENSG00000135114	NA	synonymous SNV	ENSG00000135114:ENST00000257570:exon2:c.C408T:p.L136L,ENSG00000135114:ENST00000339275:exon2:c.C408T:p.L136L	NA	Name=Cardiovascular disease risk factors	12q24.31	Score=744;Name=V$EVI1_01	NA	NA	NA	rs3213545	0.31	0.31	0.284	0.313099	0.3072	0.4692	0.2839	0.1293	0.4274	0.3	0.49	0.3	0.13	0.3163	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.210666	NA	NA	0.300581	0.146391	NA	0.239	NA	6.7425856
978	12	32764184	32764184	G	A	exonic	FGD4	NA	synonymous SNV	FGD4:NM_139241:exon10:c.G1305A:p.R435R	exonic	ENSG00000139132	NA	synonymous SNV	ENSG00000139132:ENST00000381025:exon6:c.G561A:p.R187R,ENSG00000139132:ENST00000546442:exon9:c.G1026A:p.R342R,ENSG00000139132:ENST00000427716:exon10:c.G1305A:p.R435R,ENSG00000139132:ENST00000525053:exon10:c.G1641A:p.R547R,ENSG00000139132:ENST00000531134:exon10:c.G1560A:p.R520R,ENSG00000139132:ENST00000534526:exon10:c.G1716A:p.R572R,ENSG00000139132:ENST00000266482:exon11:c.G561A:p.R187R	Score=621;Name=lod=446	NA	12p11.21	Score=799;Name=V$XBP1_01	NA	NA	NA	rs10844253	0.24	0.24	0.251	0.265176	0.3161	0.1657	0.2781	0.2027	0.3906	0.31	0.18	0.26	0.21	0.2955	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.120513	NA	NA	0.312907	0.238084	NA	0.181	NA	6.7421596
978	1	29475648	29475648	T	G	exonic	SRSF4	NA	nonsynonymous SNV	SRSF4:NM_005626:exon6:c.A759C:p.E253D	exonic	ENSG00000116350	NA	nonsynonymous SNV	ENSG00000116350:ENST00000546138:exon4:c.A454C:p.K152Q,ENSG00000116350:ENST00000373795:exon6:c.A759C:p.E253D	NA	NA	1p35.3	NA	NA	NA	NA	rs2230679	0.74	0.74	0.684	0.720248	0.8817	0.5635	0.745	0.7231	0.6943	0.88	0.54	0.78	0.73	0.8179	0.89	0.87	T	0.0	B	0.0	B	0.005	N	1.000	P	-0.255	N	2.58	T	-0.959	T	0.000	T	0.023	0.86	8.48	-3.25	-0.452	-1.716	1.100	0.859665	NA	0.76	0.891628	0.766682	NA	0.739	NA	6.7421054
978	3	156880573	156880573	T	C	intergenic	CCNL1,VEPH1	dist=2091;dist=96959	NA	NA	ncRNA_exonic	ENSG00000244515	NA	NA	NA	Score=544;Name=lod=216	NA	3q25.31	NA	Name=CTCF_(SC-5916),NRSF,CTCF_(C-20),Rad21,CTCF	Name=29	NA	rs4608646	0.27	0.27	0.191	0.237819	0.2584	0.3333	0.4741	0.0628	0.1871	0.25	0.36	0.43	0.07	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.364116	NA	NA	NA	NA	NA	0.167	NA	6.7416
978	3	156880587	156880587	A	G	intergenic	CCNL1,VEPH1	dist=2105;dist=96945	NA	NA	ncRNA_exonic	ENSG00000244515	NA	NA	NA	Score=544;Name=lod=216	NA	3q25.31	NA	Name=Rad21,CTCF_(C-20),CTCF,NRSF,CTCF_(SC-5916)	Name=29	NA	rs4383467	0.27	0.27	0.189	0.242412	0.2584	0.3333	0.4784	0.0794	0.1851	0.25	0.36	0.43	0.08	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.363393	NA	NA	NA	NA	NA	0.167	NA	6.7416
978	3	39453160	39453160	G	A	exonic	RPSA	NA	synonymous SNV	RPSA:NM_001012321:exon4:c.G519A:p.L173L,RPSA:NM_002295:exon5:c.G519A:p.L173L	exonic	ENSG00000168028	NA	synonymous SNV	ENSG00000168028:ENST00000301821:exon5:c.G519A:p.L173L,ENSG00000168028:ENST00000443003:exon5:c.G534A:p.L178L,ENSG00000168028:ENST00000458478:exon5:c.G519A:p.L173L	Score=549;Name=lod=228	NA	3p22.1	NA	Name=Pol2(b)	NA	NA	rs1803894	0.26	0.26	0.221	0.250799	0.3082	0.2778	0.3084	0.152	0.2566	0.3	0.28	0.3	0.14	0.2929	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.230131	NA	NA	0.324186	0.166364	NA	0.225	NA	6.7413806
978	10	5920121	5920121	T	C	exonic	ANKRD16	NA	nonsynonymous SNV	ANKRD16:NM_001009941:exon7:c.A1058G:p.Q353R,ANKRD16:NM_019046:exon7:c.A1058G:p.Q353R	exonic	ENSG00000134461	NA	nonsynonymous SNV	ENSG00000134461:ENST00000380092:exon7:c.A1058G:p.Q353R,ENSG00000134461:ENST00000380094:exon7:c.A1058G:p.Q353R	Score=321;Name=lod=27	NA	10p15.1	NA	NA	NA	NA	rs1052420	0.84	0.84	0.808	0.803914	0.8638	0.8472	0.9135	0.6853	0.7802	0.87	0.84	0.92	0.71	0.8524	0.92	0.23	T	0.001	B	0.002	B	0.166	N	0.000	P	0.205	N	-0.13	T	-1.014	T	0.000	T	0.054	1.415	10.67	3.83	0.731	-0.027	9.631	1.415149	1.415149	0.2	0.87593	0.715388	NA	0.804	NA	6.7412034
978	12	13764774	13764774	G	A	exonic	GRIN2B	NA	synonymous SNV	GRIN2B:NM_000834:exon8:c.C1665T:p.S555S	exonic	ENSG00000150086	NA	synonymous SNV	ENSG00000150086:ENST00000279593:exon8:c.C1665T:p.S555S	NA	NA	12p13.1	Score=890;Name=V$ATF_01	NA	NA	NA	rs1805482	0.22	0.22	0.201	0.190096	0.33	0.0089	0.3718	0.1536	0.1534	0.33	0.01	0.39	0.15	0.2647	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.020054	NA	NA	0.334186	0.174535	NA	0.138	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117191.2;CLNDSDB=.;CLNDSDBID=.	6.7377806
978	19	35449409	35449409	G	A	exonic	ZNF792	NA	synonymous SNV	ZNF792:NM_175872:exon4:c.C1350T:p.H450H	exonic	ENSG00000180884	NA	synonymous SNV	ENSG00000180884:ENST00000605484:exon2:c.C1149T:p.H383H,ENSG00000180884:ENST00000404801:exon4:c.C1350T:p.H450H	NA	NA	19q13.11	NA	Name=KAP1,SETDB1	Name=12	NA	rs2651081	0.31	0.31	0.352	0.327276	0.329	0.2034	0.1859	0.4841	0.3415	0.34	0.21	0.22	0.46	0.3063	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.717627	NA	NA	0.296047	0.443259	ID=COSM148589;OCCURENCE=1(stomach)	0.261	NA	6.7353196
979	17	38955961	38955961	G	A	exonic	KRT28	NA	nonsynonymous SNV	KRT28:NM_181535:exon1:c.C185T:p.A62V	exonic	ENSG00000173908	NA	nonsynonymous SNV	ENSG00000173908:ENST00000306658:exon1:c.C185T:p.A62V	NA	NA	17q21.2	NA	NA	NA	NA	rs4624233	0.27	0.27	0.263	0.292532	0.1938	0.4077	0.134	0.2958	0.3834	0.19	0.4	0.16	0.3	0.2203	0.4	0.5	T	0.0	B	0.005	B	0.706	N	1.000	P	0.69	N	-0.97	T	-0.994	T	0.000	T	0.078	0.276	5.492	1.35	0.623	-0.548	5.845	0.275848	NA	NA	0.185581	0.289832	NA	0.333	NA	6.7336524
979	7	25267934	25267934	T	C	exonic	NPVF	NA	nonsynonymous SNV	NPVF:NM_022150:exon1:c.A125G:p.D42G	exonic	ENSG00000105954	NA	nonsynonymous SNV	ENSG00000105954:ENST00000222674:exon1:c.A125G:p.D42G	NA	NA	7p15.3	NA	NA	NA	NA	rs877834	0.26	0.26	0.244	0.247204	0.1849	0.5129	0.2594	0.0908	0.2403	0.19	0.51	0.25	0.09	0.2319	0.51	0.21	T	0.004	B	0.006	B	0.108	N	1.000	P	1.71	L	1.51	T	-0.940	T	0.000	T	0.048	0.782	8.124	0.266	0.085	0.069	4.437	0.781553	NA	0.33	0.183493	0.109595	NA	0.254	NA	6.7330404
979	11	17526256	17526256	A	G	intronic	USH1C	NA	NA	NA	intronic	ENSG00000006611	NA	NA	NA	NA	NA	11p15.1	NA	Name=CTCF,Rad21,SMC3_(ab9263),YY1_(C-20),Znf143_(16618-1-AP),CTCF_(C-20),CTCF_(SC-5916)	Name=140	NA	rs76769358	0.03	0.03	0.016	0.0261581	0.0596	NA	0.0432	0.0008	0.0409	0.06	NA	0.07	NA	0.1344	0.073	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.813201	NA	NA	0.073142	0.015	NA	0.08	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000041265.1|RCV000126232.1;CLNDSDB=.|.;CLNDSDBID=.|.	6.732858
979	2	74900588	74900588	G	T	exonic	SEMA4F	NA	synonymous SNV	SEMA4F:NM_001271662:exon5:c.G456T:p.G152G,SEMA4F:NM_004263:exon6:c.G555T:p.G185G	exonic	ENSG00000135622	NA	nonsynonymous SNV	ENSG00000135622:ENST00000446927:exon4:c.G362T:p.G121V,ENSG00000135622:ENST00000420077:exon5:c.G461T:p.G154V	NA	NA	2p13.1	Score=930;Name=V$ZIC1_01	NA	NA	NA	rs34617503	0.07	0.07	0.072	0.0700879	0.0895	0.0933	0.0591	0.0363	0.0798	0.1	0.09	0.06	0.02	0.0837	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.408873	NA	0.6	0.094767	0.046527	NA	0.087	NA	6.732033
979	3	171395468	171395468	A	G	exonic	PLD1	NA	synonymous SNV	PLD1:NM_001130081:exon16:c.T1770C:p.R590R,PLD1:NM_002662:exon17:c.T1884C:p.R628R	exonic	ENSG00000075651	NA	nonsynonymous SNV	ENSG00000075651:ENST00000342215:exon15:c.T1556C:p.V519A	Score=429;Name=lod=74	NA	3q26.31	NA	NA	NA	NA	rs2124147	0.46	0.46	0.455	0.464657	0.3926	0.3234	0.4597	0.7269	0.3333	0.4	0.3	0.42	0.78	0.4467	0.78	0.92	T	.	.	.	.	.	.	0.000	P	.	.	1.53	T	-0.972	T	0.000	T	.	1.216	9.936	0.511	-0.056	0.739	3.719	1.216235	NA	0.09	0.42907	0.667272	NA	0.464	NA	6.73163
979	17	46939658	46939658	C	G	exonic	CALCOCO2	NA	nonsynonymous SNV	CALCOCO2:NM_001261393:exon11:c.C1039G:p.P347A,CALCOCO2:NM_001261395:exon11:c.C949G:p.P317A,CALCOCO2:NM_005831:exon12:c.C1165G:p.P389A,CALCOCO2:NM_001261390:exon13:c.C1237G:p.P413A,CALCOCO2:NM_001261391:exon13:c.C1228G:p.P410A	exonic	ENSG00000136436	NA	nonsynonymous SNV	ENSG00000136436:ENST00000416445:exon11:c.C1039G:p.P347A,ENSG00000136436:ENST00000508679:exon11:c.C949G:p.P317A,ENSG00000136436:ENST00000258947:exon12:c.C1165G:p.P389A,ENSG00000136436:ENST00000448105:exon13:c.C1237G:p.P413A,ENSG00000136436:ENST00000509507:exon13:c.C1228G:p.P410A	NA	NA	17q21.32	NA	NA	NA	NA	rs10278	0.28	0.28	0.24	NA	NA	NA	NA	NA	NA	0.27	0.16	0.43	0.32	0.2993	0.43	0.23	T	0.012	B	0.006	B	0.190	N	1.000	P	1.795	L	2.74	T	-0.993	T	0.000	T	0.066	2.161	13.18	-0.674	-0.118	0.019	4.560	2.161292	2.161292	0.13	0.302442	0.334771	NA	0.37	NA	6.7315914
979	1	115604798	115604798	C	T	exonic	TSPAN2	NA	synonymous SNV	TSPAN2:NM_005725:exon3:c.G228A:p.G76G	exonic	ENSG00000134198	NA	synonymous SNV	ENSG00000134198:ENST00000369514:exon3:c.G228A:p.G76G,ENSG00000134198:ENST00000369515:exon3:c.G228A:p.G76G,ENSG00000134198:ENST00000369516:exon3:c.G228A:p.G76G,ENSG00000134198:ENST00000433172:exon3:c.G210A:p.G70G	NA	NA	1p13.2	Score=813;Name=V$RREB1_01	Name=CTCF	NA	NA	rs10776795	0.34	0.34	0.302	0.320088	0.3012	0.4921	0.3343	0.3018	0.1769	0.28	0.46	0.36	0.3	0.3422	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.254893	1.254893	NA	0.292297	0.293236	ID=COSM423531;OCCURENCE=1(breast)	0.341	NA	6.7309696
979	21	46086457	46086457	G	A	exonic	KRTAP12-2	NA	nonsynonymous SNV	KRTAP12-2:NM_181684:exon1:c.C347T:p.A116V	exonic	ENSG00000221864	NA	nonsynonymous SNV	ENSG00000221864:ENST00000360770:exon1:c.C347T:p.A116V	NA	NA	21q22.3	NA	NA	NA	NA	rs12483730	0.15	0.15	0.136	0.144369	0.2078	0.0923	0.1657	0.0877	0.1943	0.21	0.1	0.17	0.09	0.1899	0.21	0.32	T	0.006	B	0.001	B	.	.	0.231	P	-1.42	N	4.1	T	-0.934	T	0.000	T	0.04	-0.817	0.632	0.394	0.175	0.492	4.421	-0.816857	NA	NA	0.204908	0.089294	NA	0.051	NA	6.7307254
979	2	232196564	232196564	C	T	exonic	ARMC9	NA	synonymous SNV	ARMC9:NM_025139:exon20:c.C1833T:p.L611L	exonic	ENSG00000135931	NA	synonymous SNV	ENSG00000135931:ENST00000349938:exon20:c.C1833T:p.L611L	Score=545;Name=lod=218	NA	2q37.1	Score=822;Name=V$MEIS1AHOXA9_01	NA	NA	NA	rs1669083	0.27	0.27	0.264	0.26238	0.3241	0.2212	0.3084	0.211	0.2781	0.34	0.21	0.27	0.23	0.3034	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.210701	NA	NA	0.308721	0.217204	ID=COSM149094,COSM149095;OCCURENCE=1(stomach)	0.355	NA	6.7304456
979	2	48025764	48025764	C	T	exonic	MSH6	NA	synonymous SNV	MSH6:NM_000179:exon4:c.C642T:p.Y214Y	exonic	ENSG00000116062	NA	nonsynonymous SNV	ENSG00000116062:ENST00000445503:exon3:c.C472T:p.R158C	NA	NA	2p16.3	NA	NA	NA	NA	rs1800937	0.05	0.05	0.038	0.0285543	0.1034	NA	0.0432	0.0038	0.0041	0.11	NA	0.07	0.0041	0.0735	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.799294	NA	0	0.09314	0.022242	NA	0.022	CLINSIG=pathogenic;CLNDBN=Lynch_syndrome,Lynch_syndrome|not_specified|Neoplastic_Syndromes\x2c_Hereditary;CLNREVSTAT=exp,exp|mult|single;CLNACC=RCV000075015.1,RCV000030277.2|RCV000035327.2|RCV000132355.1;CLNDSDB=GeneReviews:MedGen:SNOMED_CT,GeneReviews:MedGen:SNOMED_CT|.|MedGen;CLNDSDBID=NBK1211:C0009405:315058005,NBK1211:C0009405:315058005|.|C0027672	6.72996
979	X	2832742	2832742	G	C	intronic	ARSD	NA	NA	NA	intronic	ENSG00000006756	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs211648	0.76	0.76	NA	NA	NA	NA	NA	NA	NA	0.6	0.91	0.75	0.87	0.6451	0.91	0.03	D	0.0	B	0.0	B	.	.	1.000	P	.	.	.	.	-1.020	T	0.000	T	.	-0.938	0.363	-1.99	-1.546	-2.106	3.575	-0.938272	NA	0.84	0.625297	0.858149	NA	0.522	NA	6.729603
979	2	233757679	233757679	G	A	exonic	NGEF	NA	synonymous SNV	NGEF:NM_001114090:exon5:c.C795T:p.A265A,NGEF:NM_019850:exon7:c.C1071T:p.A357A	exonic	ENSG00000066248	NA	synonymous SNV	ENSG00000066248:ENST00000416114:exon3:c.C240T:p.A80A,ENSG00000066248:ENST00000458735:exon3:c.C240T:p.A80A,ENSG00000066248:ENST00000539537:exon3:c.C240T:p.A80A,ENSG00000066248:ENST00000373552:exon5:c.C795T:p.A265A,ENSG00000066248:ENST00000264051:exon7:c.C1071T:p.A357A	NA	NA	2q37.1	NA	NA	NA	NA	rs748002	0.34	0.34	0.346	0.300319	0.326	0.3492	0.3963	0.2791	0.184	0.33	0.39	0.37	0.27	0.3096	0.39	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	.	.	.	.	.	-0.294	2.595	3.46	0.597	-0.253	5.397	-0.294311	NA	NA	0.302674	0.285974	ID=COSM442488,COSM1482873;OCCURENCE=1(breast)	0.188	NA	6.7283926
979	21	46086407	46086407	C	T	exonic	KRTAP12-2	NA	nonsynonymous SNV	KRTAP12-2:NM_181684:exon1:c.G397A:p.V133I	exonic	ENSG00000221864	NA	nonsynonymous SNV	ENSG00000221864:ENST00000360770:exon1:c.G397A:p.V133I	NA	NA	21q22.3	NA	NA	NA	NA	rs12481809	0.15	0.15	0.142	0.145966	0.2068	0.0923	0.1657	0.0946	0.1943	0.21	0.1	0.17	0.09	0.1938	0.21	0.36	T	0.262	B	0.044	B	.	.	1.000	P	1.24	L	4.21	T	-0.917	T	0.000	T	0.014	-0.257	2.766	1.54	0.697	0.296	5.772	-0.25671	NA	NA	0.204486	0.093503	NA	0.058	NA	6.7282474
979	12	6575044	6575044	G	T	exonic	VAMP1	NA	synonymous SNV	VAMP1:NM_014231:exon3:c.C252A:p.A84A,VAMP1:NM_016830:exon3:c.C252A:p.A84A,VAMP1:NM_199245:exon3:c.C252A:p.A84A	exonic	ENSG00000139190	NA	synonymous SNV	ENSG00000139190:ENST00000361716:exon3:c.C252A:p.A84A,ENSG00000139190:ENST00000396308:exon3:c.C252A:p.A84A,ENSG00000139190:ENST00000400911:exon3:c.C252A:p.A84A,ENSG00000139190:ENST00000535180:exon3:c.C252A:p.A84A	Score=628;Name=lod=475	NA	12p13.31	NA	Name=NFKB	NA	NA	rs2072375	0.28	0.28	0.278	0.272364	0.3241	0.3284	0.1859	0.2095	0.3078	0.32	0.33	0.2	0.21	0.2936	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.051745	2.051745	NA	0.320814	0.201089	NA	0.232	NA	6.7281526
979	1	43779564	43779564	T	C	exonic	TIE1	NA	synonymous SNV	TIE1:NM_001253357:exon14:c.T2199C:p.A733A,TIE1:NM_005424:exon14:c.T2334C:p.A778A	exonic	ENSG00000066056	NA	synonymous SNV	ENSG00000066056:ENST00000433781:exon9:c.T1269C:p.A423A,ENSG00000066056:ENST00000372476:exon14:c.T2334C:p.A778A	NA	NA	1p34.2	Score=876;Name=V$YY1_01	Name=c-Myc	Name=5	NA	rs3120276	0.75	0.75	0.738	0.803115	0.6272	0.879	0.6427	0.8911	0.9008	0.62	0.87	0.64	0.88	0.6994	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.282717	NA	NA	0.611977	0.849977	NA	0.667	NA	6.7280896
979	2	64327592	64327592	T	C	exonic	PELI1	NA	synonymous SNV	PELI1:NM_020651:exon4:c.A243G:p.L81L	exonic	ENSG00000197329	NA	synonymous SNV	ENSG00000197329:ENST00000358912:exon4:c.A243G:p.L81L	Score=633;Name=lod=500	NA	2p14	Score=876;Name=V$NKX3A_01	NA	NA	NA	rs329497	0.37	0.37	0.339	0.35024	0.2992	0.752	0.3112	0.0688	0.3967	0.3	0.73	0.35	0.06	0.3352	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.403398	1.403398	NA	0.304302	0.121425	NA	0.326	NA	6.7279646
979	3	170214459	170214459	G	T	intronic	SLC7A14	NA	NA	NA	intronic	ENSG00000013293,ENSG00000013297	NA	NA	NA	Score=646;Name=lod=565	NA	3q26.2	NA	Name=CTCF,Rad21,CTCF_(SC-5916)	Name=3	NA	rs2008829	0.35	0.35	0.354	0.382188	0.2724	0.1875	0.3343	0.7254	0.2658	0.27	0.18	0.33	0.7	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.594607	NA	NA	NA	NA	NA	0.326	NA	6.7276
979	7	102112980	102112980	G	A	exonic	LRWD1	NA	synonymous SNV	LRWD1:NM_152892:exon13:c.G1614A:p.T538T	exonic	ENSG00000161036	NA	synonymous SNV	ENSG00000161036:ENST00000292616:exon13:c.G1614A:p.T538T	NA	NA	7q22.1	NA	NA	NA	NA	rs3800987	0.51	0.51	0.497	0.461661	0.662	0.372	0.5519	0.3139	0.4836	0.66	0.4	0.59	0.35	0.6329	0.66	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-1.039	T	0.000	T	.	-1.162	0.094	-10.2	-3.315	-7.784	4.671	-1.16208	NA	NA	0.644335	0.358621	ID=COSM452074;OCCURENCE=1(breast)	0.587	NA	6.7274316
979	6	31079643	31079643	T	C	exonic	C6orf15	NA	nonsynonymous SNV	C6orf15:NM_014070:exon2:c.A493G:p.K165E	exonic	ENSG00000204542	NA	nonsynonymous SNV	ENSG00000204542:ENST00000259870:exon2:c.A493G:p.K165E	NA	NA	6p21.33	NA	NA	NA	NA	rs1265054	0.52	0.52	0.499	0.531949	0.5149	0.4871	0.5663	0.5461	0.5521	0.5	0.47	0.57	0.56	0.5371	0.58	1	T	0.0	B	0.0	B	0.466	N	1.000	P	-1.175	N	3.56	T	-0.928	T	0.001	T	0.022	-1.014	0.241	2.48	0.110	-0.109	6.228	-1.013881	NA	1	0.555037	0.577243	NA	0.471	NA	6.7262964
980	7	112097121	112097121	C	T	intronic	IFRD1	NA	NA	NA	exonic	ENSG00000006652	NA	nonsynonymous SNV	ENSG00000006652:ENST00000429071:exon4:c.C437T:p.T146M	NA	NA	7q31.1	NA	NA	Name=2	NA	rs6968084	0.17	0.17	0.161	0.208267	0.1272	0.1597	0.1974	0.2254	0.3262	0.13	0.16	0.2	0.23	0.1767	0.23	.	.	0.058	B	0.01	B	.	.	1.000	P	.	.	.	.	-0.989	T	0.000	T	0.037	0.377	6.044	-1.25	-0.379	-0.144	4.205	0.376531	NA	0	0.138256	0.201089	NA	0.21	NA	6.7245107
980	3	136088038	136088038	G	A	exonic	STAG1	NA	synonymous SNV	STAG1:NM_005862:exon24:c.C2457T:p.F819F	exonic	ENSG00000118007	NA	synonymous SNV	ENSG00000118007:ENST00000536929:exon13:c.C1209T:p.F403F,ENSG00000118007:ENST00000236698:exon24:c.C2457T:p.F819F,ENSG00000118007:ENST00000383202:exon24:c.C2457T:p.F819F,ENSG00000118007:ENST00000434713:exon27:c.C1779T:p.F593F	Score=723;Name=lod=1153	NA	3q22.3	Score=821;Name=V$CDC5_01	NA	NA	NA	rs9860801	0.27	0.27	0.273	0.302915	0.3022	0.0585	0.2017	0.5522	0.2904	0.3	0.04	0.23	0.54	0.3106	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.976256	NA	NA	0.329767	0.520881	NA	0.348	NA	6.7240996
980	15	89421327	89421327	A	G	exonic	HAPLN3	NA	synonymous SNV	HAPLN3:NM_178232:exon5:c.T957C:p.G319G	exonic	ENSG00000140511	NA	synonymous SNV	ENSG00000140511:ENST00000359595:exon5:c.T957C:p.G319G,ENSG00000140511:ENST00000562889:exon6:c.T1143C:p.G381G	Score=533;Name=lod=196	NA	15q26.1	Score=792;Name=V$MYOGNF1_01	NA	NA	NA	rs2280463	0.39	0.39	0.424	0.437899	0.2932	0.256	0.3228	0.8139	0.3476	0.28	0.24	0.36	0.78	0.3399	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.253226	1.253226	NA	0.309956	0.7475	NA	0.536	NA	6.7236106
980	8	101206391	101206391	G	A	exonic	SPAG1	NA	nonsynonymous SNV	SPAG1:NM_003114:exon10:c.G991A:p.E331K,SPAG1:NM_172218:exon10:c.G991A:p.E331K	exonic	ENSG00000104450	NA	nonsynonymous SNV	ENSG00000104450:ENST00000251809:exon10:c.G991A:p.E331K,ENSG00000104450:ENST00000388798:exon10:c.G991A:p.E331K,ENSG00000104450:ENST00000520508:exon10:c.G991A:p.E331K,ENSG00000104450:ENST00000520643:exon10:c.G991A:p.E331K	NA	NA	8q22.2	NA	NA	NA	NA	rs17335870	0.15	0.15	0.103	0.150559	0.2117	0.0734	0.2392	0.0537	0.2352	0.21	0.07	0.25	0.07	0.1986	0.25	0.79	T	0.0	B	0.0	B	0.074	N	1.000	P	-1.245	N	-0.79	T	-1.069	T	0.000	T	0.035	-1.3	0.037	-1.58	-0.498	0.387	7.684	-1.299519	NA	0.53	0.2	0.075579	NA	0.13	NA	6.7230334
980	9	5774225	5774225	T	G	exonic	KIAA1432	NA	synonymous SNV	KIAA1432:NM_001206557:exon25:c.T4140G:p.T1380T,KIAA1432:NM_020829:exon26:c.T4251G:p.T1417T	exonic	ENSG00000107036	NA	synonymous SNV	ENSG00000107036:ENST00000449720:exon24:c.T3903G:p.T1301T,ENSG00000107036:ENST00000418622:exon25:c.T4014G:p.T1338T,ENSG00000107036:ENST00000414202:exon26:c.T4251G:p.T1417T	Score=504;Name=lod=149	NA	9p24.1	NA	NA	NA	NA	rs3739648	0.34	0.34	0.302	0.331869	0.2853	0.5853	0.2968	0.1233	0.4254	0.3	0.61	0.31	0.1	0.3517	0.61	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.909	T	0.000	T	.	0.374	6.032	0.353	0.127	0.146	10.508	0.374309	NA	NA	0.30686	0.138448	NA	0.312	NA	6.7228066
980	21	19169218	19169218	G	C	exonic	C21orf91	NA	nonsynonymous SNV	C21orf91:NM_001100420:exon3:c.C345G:p.N115K,C21orf91:NM_001100421:exon3:c.C345G:p.N115K,C21orf91:NM_017447:exon3:c.C345G:p.N115K	exonic	ENSG00000154642	NA	nonsynonymous SNV	ENSG00000154642:ENST00000284881:exon3:c.C345G:p.N115K,ENSG00000154642:ENST00000400558:exon3:c.C345G:p.N115K,ENSG00000154642:ENST00000400559:exon3:c.C345G:p.N115K,ENSG00000154642:ENST00000405964:exon3:c.C345G:p.N115K	NA	NA	21q21.1	NA	NA	NA	NA	rs2824495	0.25	0.25	0.256	0.244609	0.1918	0.3978	0.2435	0.2027	0.1984	0.2	0.38	0.22	0.21	0.2168	0.38	.	.	0.001	B	0.002	B	0.377	N	1.000	P	1.245	L	2.61	T	-0.914	T	0.000	T	0.055	-0.435	1.977	0.945	0.020	0.565	4.979	-0.435132	NA	0.1	0.202372	0.214404	NA	0.333	NA	6.7223614
980	20	60503350	60503350	A	G	exonic	CDH4	NA	nonsynonymous SNV	CDH4:NM_001252338:exon11:c.A1763G:p.K588R,CDH4:NM_001252339:exon11:c.A1652G:p.K551R,CDH4:NM_001794:exon12:c.A1874G:p.K625R	exonic	ENSG00000179242	NA	nonsynonymous SNV	ENSG00000179242:ENST00000543233:exon11:c.A1652G:p.K551R,ENSG00000179242:ENST00000360469:exon12:c.A1874G:p.K625R	NA	NA	20q13.33	NA	NA	NA	NA	rs6142884	0.56	0.56	0.533	0.567292	0.5239	0.8413	0.5793	0.2504	0.7495	0.53	0.85	0.57	0.26	0.5724	0.85	.	.	0.0	B	0.001	B	0.004	N	0.999	P	-0.98	N	0.18	T	-0.973	T	0.000	T	0.086	-1.999	0.007	-2.0	-0.818	0.395	12.486	-1.998776	NA	1	0.515581	0.31616	NA	0.529	NA	6.7214524
980	5	34840841	34840841	A	G	exonic	TTC23L	NA	nonsynonymous SNV	TTC23L:NM_144725:exon2:c.A65G:p.H22R	exonic	ENSG00000205838	NA	nonsynonymous SNV	ENSG00000205838:ENST00000502674:exon1:c.A65G:p.H22R,ENSG00000205838:ENST00000505624:exon2:c.A65G:p.H22R,ENSG00000205838:ENST00000508722:exon2:c.A65G:p.H22R	NA	NA	5p13.2	NA	NA	NA	NA	rs6451173	0.53	0.53	0.547	0.53774	0.5457	0.256	0.4121	0.8986	0.4213	0.56	0.26	0.45	0.87	0.5281	0.87	0.95	T	0.0	B	0.002	B	0.812	N	1.000	P	1.95	M	2.69	T	-0.912	T	0.000	T	0.029	-0.853	0.541	-1.25	-0.345	0.234	5.621	-0.853436	NA	0.53	0.539628	0.858981	NA	0.565	NA	6.7199054
980	3	191075902	191075902	C	T	exonic	CCDC50	NA	synonymous SNV	CCDC50:NM_174908:exon3:c.C228T:p.R76R,CCDC50:NM_178335:exon3:c.C228T:p.R76R	exonic	ENSG00000152492	NA	synonymous SNV	ENSG00000152492:ENST00000392455:exon3:c.C228T:p.R76R,ENSG00000152492:ENST00000392456:exon3:c.C228T:p.R76R	Score=506;Name=lod=152	NA	3q28	NA	NA	NA	NA	rs11542549	0.29	0.29	0.266	0.267372	0.332	0.2579	0.3156	0.2322	0.2239	0.34	0.22	0.33	0.26	0.2973	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.366224	1.366224	NA	0.317907	0.25488	NA	0.21	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000041443.1;CLNDSDB=.;CLNDSDBID=.	6.7194596
980	3	46399798	46399798	T	C	exonic	CCR2	NA	synonymous SNV	CCR2:NM_001123041:exon2:c.T780C:p.N260N,CCR2:NM_001123396:exon2:c.T780C:p.N260N	exonic	ENSG00000121807	NA	synonymous SNV	ENSG00000121807:ENST00000400888:exon1:c.T780C:p.N260N,ENSG00000121807:ENST00000292301:exon2:c.T780C:p.N260N,ENSG00000121807:ENST00000445132:exon2:c.T780C:p.N260N	Score=378;Name=lod=46	NA	3p21.31	NA	Name=BATF	NA	NA	rs1799865	0.32	0.32	0.313	0.328474	0.3072	0.3185	0.3415	0.3132	0.3722	0.3	0.32	0.35	0.33	0.3192	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.490143	NA	NA	0.32105	0.34375	NA	0.232	NA	6.7192166
980	11	108383676	108383676	A	G	exonic	EXPH5	NA	nonsynonymous SNV	EXPH5:NM_015065:exon6:c.T2558C:p.L853P	exonic	ENSG00000110723	NA	nonsynonymous SNV	ENSG00000110723:ENST00000443411:exon3:c.T1994C:p.L665P,ENSG00000110723:ENST00000533052:exon3:c.T1994C:p.L665P,ENSG00000110723:ENST00000265843:exon6:c.T2558C:p.L853P,ENSG00000110723:ENST00000428840:exon6:c.T2330C:p.L777P,ENSG00000110723:ENST00000526312:exon6:c.T2330C:p.L777P,ENSG00000110723:ENST00000525344:exon7:c.T2537C:p.L846P	NA	NA	11q22.3	NA	NA	NA	NA	rs10749920	0.3	0.3	0.32	0.358427	0.1909	0.2093	0.1844	0.6876	0.363	0.18	0.23	0.17	0.66	0.2379	0.66	0.96	T	0.0	B	0.0	B	0.964	N	1.000	P	-0.55	N	4.39	T	-0.979	T	0.000	T	0.415	-0.879	0.483	1.31	-0.133	-0.200	2.538	-0.879129	NA	0.43	0.185435	0.605861	NA	0.246	NA	6.7190984
980	11	123477352	123477352	G	A	exonic	GRAMD1B	NA	synonymous SNV	GRAMD1B:NM_020716:exon10:c.G930A:p.E310E	exonic	ENSG00000023171	NA	synonymous SNV	ENSG00000023171:ENST00000322282:exon10:c.G930A:p.E310E,ENSG00000023171:ENST00000529432:exon10:c.G810A:p.E270E,ENSG00000023171:ENST00000529750:exon10:c.G930A:p.E310E,ENSG00000023171:ENST00000534764:exon10:c.G918A:p.E306E,ENSG00000023171:ENST00000456860:exon11:c.G951A:p.E317E	Score=444;Name=lod=85	NA	11q24.1	Score=782;Name=V$PAX5_02	NA	NA	NA	rs2279519	0.25	0.25	0.234	0.269369	0.3012	0.1736	0.2493	0.1944	0.4509	0.31	0.2	0.25	0.2	0.3281	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.977619	NA	NA	0.318347	0.2257	NA	0.21	NA	6.7190196
980	16	15129970	15129970	A	G	exonic	PDXDC1	NA	synonymous SNV	PDXDC1:NM_015027:exon23:c.A2205G:p.L735L	exonic	ENSG00000179889	NA	synonymous SNV	ENSG00000179889:ENST00000447912:exon22:c.A1932G:p.L644L,ENSG00000179889:ENST00000450288:exon22:c.A2121G:p.L707L,ENSG00000179889:ENST00000569715:exon22:c.A2124G:p.L708L,ENSG00000179889:ENST00000325823:exon23:c.A2160G:p.L720L,ENSG00000179889:ENST00000396410:exon23:c.A2205G:p.L735L,ENSG00000179889:ENST00000563679:exon23:c.A2259G:p.L753L	NA	Name=Metabolic traits	16p13.11	Score=763;Name=V$PAX5_02	NA	NA	NA	rs7200543	0.33	0.33	0.291	0.345048	0.3062	0.371	0.5331	0.1846	0.4417	0.32	0.38	0.48	0.19	0.3412	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.826873	NA	NA	0.300814	0.22508	NA	0.413	NA	6.7184526
980	10	101639877	101639877	A	C	exonic	DNMBP	NA	nonsynonymous SNV	DNMBP:NM_015221:exon16:c.T4239G:p.C1413W	exonic	ENSG00000107554	NA	nonsynonymous SNV	ENSG00000107554:ENST00000540316:exon8:c.T1047G:p.C349W,ENSG00000107554:ENST00000543621:exon13:c.T1977G:p.C659W,ENSG00000107554:ENST00000324109:exon16:c.T4239G:p.C1413W,ENSG00000107554:ENST00000342239:exon16:c.T4311G:p.C1437W	NA	NA	10q24.2	NA	NA	NA	NA	rs11190305	0.29	0.29	0.254	0.277157	0.3917	0.244	0.3329	0.1437	0.3344	0.39	0.26	0.37	0.11	0.3442	0.39	0.19	T	0.6	P	0.35	B	0.017	N	0.997	P	0.345	N	2.81	T	-1.004	T	0.000	T	0.188	1.185	9.817	0.604	-0.132	-0.874	1.034	1.18472	NA	0.18	0.380349	0.187699	NA	0.333	NA	6.7170844
980	6	36922385	36922385	G	A	UTR5	PI16	NM_153370:c.-152G>A	NA	NA	UTR5	ENSG00000164530	ENST00000373674:c.-152G>A	NA	NA	Score=381;Name=lod=47	NA	6p21.2	Score=809;Name=V$RREB1_01	Name=GATA-1	NA	NA	rs1405070	0.66	0.66	0.685	0.633387	0.6163	0.4891	0.6772	0.8464	0.4806	0.62	0.54	0.64	0.87	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.788296	1.788296	NA	NA	NA	NA	0.609	NA	6.7170334
980	15	62990971	62990971	C	T	exonic	TLN2	NA	synonymous SNV	TLN2:NM_015059:exon13:c.C1492T:p.L498L	exonic	ENSG00000171914	NA	synonymous SNV	ENSG00000171914:ENST00000306829:exon13:c.C1492T:p.L498L,ENSG00000171914:ENST00000561311:exon15:c.C1492T:p.L498L	Score=570;Name=lod=277	NA	15q22.2	Score=930;Name=V$HOXA3_01	NA	NA	NA	rs12905981	0.36	0.36	0.365	0.350439	0.2942	0.6855	0.3718	0.1899	0.2648	0.3	0.6	0.33	0.2	0.3386	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.185198	NA	NA	0.317326	0.210849	ID=COSM287729;OCCURENCE=1(large_intestine)	0.297	NA	6.7165406
980	2	130897620	130897620	A	G	exonic	CCDC74B	NA	nonsynonymous SNV	CCDC74B:NM_001258307:exon6:c.T728C:p.V243A,CCDC74B:NM_207310:exon6:c.T926C:p.V309A	exonic	ENSG00000152076	NA	nonsynonymous SNV	ENSG00000152076:ENST00000392984:exon5:c.T1232C:p.V411A,ENSG00000152076:ENST00000310463:exon6:c.T926C:p.V309A,ENSG00000152076:ENST00000409943:exon6:c.T728C:p.V243A	NA	NA	2q21.1	NA	NA	NA	NA	rs2259332	0.29	0.29	0.122	0.363818	0.3032	0.3839	0.4107	0.3351	0.411	0.25	0.34	0.31	0.28	0.314	0.34	0.38	T	0.0	B	0.001	B	0.248	N	1.000	P	-0.715	N	1.59	T	-0.962	T	0.000	T	0.115	-3.455	0.001	0.077	-0.593	0.033	3.125	-3.455399	NA	0	NA	NA	NA	0.355	NA	6.7161334
981	3	148727133	148727133	G	A	exonic	GYG1	NA	synonymous SNV	GYG1:NM_001184720:exon5:c.G552A:p.P184P,GYG1:NM_001184721:exon5:c.G552A:p.P184P,GYG1:NM_004130:exon5:c.G552A:p.P184P	exonic	ENSG00000163754	NA	synonymous SNV	ENSG00000163754:ENST00000296048:exon5:c.G552A:p.P184P,ENSG00000163754:ENST00000345003:exon5:c.G552A:p.P184P,ENSG00000163754:ENST00000461191:exon5:c.G540A:p.P180P,ENSG00000163754:ENST00000484197:exon5:c.G552A:p.P184P	Score=664;Name=lod=667	NA	3q24	Score=774;Name=V$ARNT_02	NA	NA	NA	rs4938	0.31	0.31	0.292	0.301318	0.335	0.3284	0.3055	0.2844	0.2587	0.32	0.33	0.31	0.28	0.3125	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.664462	NA	NA	0.304302	0.274852	NA	0.29	NA	6.7148646
981	21	40871810	40871810	T	C	exonic	SH3BGR	NA	nonsynonymous SNV	SH3BGR:NM_001001713:exon4:c.T230C:p.V77A,SH3BGR:NM_007341:exon4:c.T563C:p.V188A	exonic	ENSG00000185437	NA	nonsynonymous SNV	ENSG00000185437:ENST00000447939:exon1:c.T62C:p.V21A,ENSG00000185437:ENST00000423596:exon2:c.T89C:p.V30A,ENSG00000185437:ENST00000333634:exon4:c.T563C:p.V188A,ENSG00000185437:ENST00000380631:exon4:c.T230C:p.V77A,ENSG00000185437:ENST00000380634:exon4:c.T230C:p.V77A,ENSG00000185437:ENST00000380637:exon4:c.T230C:p.V77A,ENSG00000185437:ENST00000440288:exon4:c.T230C:p.V77A	NA	NA	21q22.2	NA	NA	NA	NA	rs9974333	0.54	0.54	0.525	0.550919	0.5288	0.6905	0.6124	0.4334	0.545	0.52	0.68	0.58	0.39	0.5566	0.68	1	T	0.0	B	0.0	B	0.283	N	0.999	P	-0.55	N	1.98	T	-0.936	T	0.000	T	0.027	-0.309	2.53	-1.76	-0.467	-1.098	0.401	-0.308722	NA	0.54	0.534767	0.450068	ID=COSM1179691;OCCURENCE=1(prostate)	0.674	NA	6.7131664
981	1	3428160	3428160	T	G	exonic	MEGF6	NA	synonymous SNV	MEGF6:NM_001409:exon9:c.A1068C:p.T356T	exonic	ENSG00000162591	NA	synonymous SNV	ENSG00000162591:ENST00000294599:exon6:c.A753C:p.T251T,ENSG00000162591:ENST00000356575:exon9:c.A1068C:p.T356T,ENSG00000162591:ENST00000485002:exon9:c.A1089C:p.T363T	Score=409;Name=lod=61	NA	1p36.32	Score=929;Name=V$LMO2COM_01	NA	NA	NA	rs2820999	0.48	0.48	0.487	0.5	0.2863	0.6409	0.4049	0.7511	0.3027	0.27	0.61	0.43	0.69	0.3713	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.021102	NA	NA	0.296071	0.674458	NA	0.71	NA	6.7129956
981	14	106174221	106174221	G	A	intergenic	ELK2AP,KIAA0125	dist=35077;dist=209617	NA	NA	exonic	ENSG00000211895	NA	nonsynonymous SNV	ENSG00000211895:ENST00000390547:exon2:c.C568T:p.P190S	Score=378;Name=lod=46	NA	14q32.33	NA	Name=Pol2-4H8	NA	NA	rs117775520	0.01	0.01	0.015	0.0185703	0.0398	NA	0.036	0.0015	0.0266	0.03	NA	0.02	0.002	0.0363	0.044	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.53735	NA	NA	0.044298	0.005417	NA	0.007	NA	6.7129354
981	19	15807884	15807884	A	G	exonic	CYP4F12	NA	nonsynonymous SNV	CYP4F12:NM_023944:exon13:c.A1564G:p.S522G	exonic	ENSG00000186204	NA	nonsynonymous SNV	ENSG00000186204:ENST00000324632:exon12:c.A1564G:p.S522G,ENSG00000186204:ENST00000550308:exon13:c.A1564G:p.S522G	NA	NA	19p13.12	NA	NA	NA	NA	rs593818	0.6	0.6	0.575	0.614217	0.5129	0.7421	0.647	0.6006	0.5818	0.52	0.73	0.62	0.57	0.5823	0.73	1	T	0.0	B	0.0	B	0.240	N	1.000	P	0	N	-0.33	T	-0.961	T	0.000	T	0.029	-1.82	0.009	-1.81	-0.729	-1.458	3.753	-1.820459	NA	1	0.525396	0.61106	NA	0.529	NA	6.7127374
981	15	55526886	55526886	C	T	intronic	RAB27A	NA	NA	NA	intronic	ENSG00000069974	NA	NA	NA	Score=295;Name=lod=21	NA	15q21.3	NA	Name=FOXA1_(C-20)	Name=3	NA	rs72742261	0.33	0.33	0.317	0.307907	0.2873	0.6419	0.3473	0.0318	0.3303	0.27	0.64	0.36	0.03	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.613572	3.613572	NA	NA	NA	NA	0.333	NA	6.7127
981	12	124229429	124229429	T	C	exonic	ATP6V0A2	NA	synonymous SNV	ATP6V0A2:NM_012463:exon13:c.T1515C:p.N505N	exonic	ENSG00000185344	NA	synonymous SNV	ENSG00000185344:ENST00000330342:exon13:c.T1515C:p.N505N	NA	NA	12q24.31	Score=943;Name=V$MEIS1_01	Name=CTCF	NA	NA	rs7135542	0.79	0.79	0.794	0.799521	0.6292	0.9504	0.7867	0.8759	0.7249	0.63	0.95	0.75	0.87	0.6934	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.075139	NA	NA	0.631395	0.820245	ID=COSM1127520;OCCURENCE=1(prostate)	0.819	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000081547.1;CLNDSDB=.;CLNDSDBID=.	6.7126716
981	14	51224658	51224658	T	A	exonic	NIN	NA	synonymous SNV	NIN:NM_020921:exon18:c.A3090T:p.S1030S,NIN:NM_182944:exon18:c.A3090T:p.S1030S,NIN:NM_182946:exon18:c.A3090T:p.S1030S	exonic	ENSG00000100503	NA	synonymous SNV	ENSG00000100503:ENST00000530997:exon16:c.A3090T:p.S1030S,ENSG00000100503:ENST00000245441:exon18:c.A3090T:p.S1030S,ENSG00000100503:ENST00000324330:exon18:c.A3090T:p.S1030S,ENSG00000100503:ENST00000382041:exon18:c.A3090T:p.S1030S,ENSG00000100503:ENST00000453196:exon18:c.A3090T:p.S1030S,ENSG00000100503:ENST00000476352:exon18:c.A3090T:p.S1030S	NA	NA	14q22.1	NA	NA	NA	NA	rs2073348	0.36	0.36	0.33	0.320887	0.3131	0.503	0.4308	0.1732	0.2628	0.32	0.52	0.45	0.17	0.3248	0.52	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.927	T	0.000	T	.	-1.619	0.013	0.168	0.042	-0.765	0.913	-1.619033	NA	NA	0.316977	0.193373	NA	0.312	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117802.2;CLNDSDB=.;CLNDSDBID=.	6.7117896
981	6	31379823	31379823	C	G	exonic	MICA	NA	nonsynonymous SNV	MICA:NM_000247:exon4:c.C713G:p.T238S,MICA:NM_001177519:exon4:c.C713G:p.T238S	exonic	ENSG00000204520	NA	nonsynonymous SNV	ENSG00000204520:ENST00000421350:exon3:c.C386G:p.T129S,ENSG00000204520:ENST00000449934:exon4:c.C713G:p.T238S	NA	NA	6p21.33	NA	NA	NA	NA	rs1051799	0.33	0.33	0.198	0.364018	0.3141	0.2996	0.4063	0.4773	0.2986	0.29	0.26	0.43	0.42	0.3083	0.43	0.14	T	0.09	B	0.076	B	0.568	U	1.000	P	.	.	4.15	T	-0.901	T	0.002	T	0.178	0.831	8.349	-0.436	0.021	-0.351	2.592	0.830533	NA	0.03	NA	NA	NA	0.333	NA	6.7109334
981	10	52420020	52420020	G	A	intergenic	SGMS1,ASAH2B	dist=36283;dist=79668	NA	NA	ncRNA_exonic	ENSG00000231345	NA	NA	NA	Score=686;Name=lod=816	NA	10q11.23	NA	Name=Rad21,ELF1_(SC-631),CTCF,Znf143_(16618-1-AP),TAF1,GABP,SMC3_(ab9263),Pol2,HEY1,TBP,YY1,CTCF_(SC-5916),ZNF263,Pol2-4H8	Name=67	NA	rs17497903	0.22	0.22	0.186	0.20627	0.2893	0.1845	0.2867	0.0961	0.2352	0.3	0.16	0.27	0.13	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.949145	NA	NA	NA	NA	NA	0.159	NA	6.7107
981	15	78632830	78632830	C	G	exonic	CRABP1	NA	synonymous SNV	CRABP1:NM_004378:exon1:c.C60G:p.L20L	exonic	ENSG00000166426	NA	synonymous SNV	ENSG00000166426:ENST00000299529:exon1:c.C60G:p.L20L	Score=399;Name=lod=56	NA	15q25.1	NA	Name=ELF1_(SC-631),TAF1,Pol2,TBP,HA-E2F1,Pol2-4H8	Name=13	NA	rs1127472	0.54	0.54	0.54	0.532748	0.6322	0.498	0.7104	0.3434	0.5961	0.64	0.47	0.69	0.37	0.6417	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.227844	NA	NA	0.682591	0.381669	ID=COSM434365;OCCURENCE=1(breast)	0.435	NA	6.7101756
981	12	49425978	49425978	T	C	exonic	MLL2	NA	synonymous SNV	MLL2:NM_003482:exon39:c.A12510G:p.P4170P	exonic	ENSG00000167548	NA	synonymous SNV	ENSG00000167548:ENST00000301067:exon39:c.A12510G:p.P4170P	Score=407;Name=lod=60	NA	12q13.12	NA	NA	NA	NA	rs3741622	0.25	0.25	0.215	0.275359	0.3022	0.4454	0.2363	0.0234	0.4407	0.28	0.39	0.24	0.03	0.3192	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.107973	NA	NA	0.335621	0.072654	ID=COSM147495;OCCURENCE=1(stomach)	0.196	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000080121.1;CLNDSDB=.;CLNDSDBID=.	6.7096456
981	9	135073877	135073877	C	T	exonic	NTNG2	NA	synonymous SNV	NTNG2:NM_032536:exon3:c.C738T:p.F246F	exonic	ENSG00000196358	NA	synonymous SNV	ENSG00000196358:ENST00000360670:exon3:c.C738T:p.F246F,ENSG00000196358:ENST00000372179:exon3:c.C738T:p.F246F,ENSG00000196358:ENST00000393228:exon3:c.C738T:p.F246F,ENSG00000196358:ENST00000393229:exon3:c.C738T:p.F246F	Score=649;Name=lod=580	NA	9q34.13	Score=815;Name=V$GRE_C	NA	NA	NA	rs3824574	0.3	0.3	0.289	0.290335	0.3211	0.378	0.2493	0.1936	0.3282	0.33	0.38	0.22	0.21	0.3178	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.042461	NA	NA	0.318288	0.192238	ID=COSM455512;OCCURENCE=1(breast)	0.239	NA	6.7094786
981	6	55196587	55196587	C	T	exonic	GFRAL	NA	nonsynonymous SNV	GFRAL:NM_207410:exon2:c.C97T:p.R33C	exonic	ENSG00000187871	NA	nonsynonymous SNV	ENSG00000187871:ENST00000340465:exon2:c.C97T:p.R33C	NA	NA	6p12.1	NA	NA	NA	NA	rs12199003	0.34	0.34	0.351	0.414936	0.3728	0.3056	0.2594	0.4312	0.6595	0.37	0.27	0.29	0.42	0.3886	0.42	0.06	T	0.712	P	0.157	B	0.448	N	1.000	P	0	N	1.47	T	-1.012	T	0.012	T	0.122	0.138	4.744	1.07	-0.047	0.179	5.458	0.13843	NA	0.15	0.363023	0.403541	NA	0.283	NA	6.7089104
981	6	31379795	31379795	A	G	exonic	MICA	NA	nonsynonymous SNV	MICA:NM_000247:exon4:c.A685G:p.S229G,MICA:NM_001177519:exon4:c.A685G:p.S229G	exonic	ENSG00000204520	NA	nonsynonymous SNV	ENSG00000204520:ENST00000421350:exon3:c.A358G:p.S120G,ENSG00000204520:ENST00000449934:exon4:c.A685G:p.S229G	NA	NA	6p21.33	NA	NA	NA	NA	rs1131898	0.3	0.3	0.187	0.364018	0.3141	0.2996	0.4063	0.4773	0.2986	0.26	0.23	0.41	0.38	0.3113	0.41	1	T	0.009	B	0.003	B	0.600	N	1.000	P	.	.	3.01	T	-0.940	T	0.003	T	0.214	-1.631	0.013	-1.92	-0.782	0.171	8.889	-1.630927	NA	1	NA	NA	NA	NA	NA	6.7079334
981	19	4294623	4294623	C	A	exonic	TMIGD2	NA	nonsynonymous SNV	TMIGD2:NM_001169126:exon4:c.G503T:p.W168L,TMIGD2:NM_144615:exon4:c.G503T:p.W168L	exonic	ENSG00000167664	NA	nonsynonymous SNV	ENSG00000167664:ENST00000600114:exon3:c.G143T:p.W48L,ENSG00000167664:ENST00000301272:exon4:c.G503T:p.W168L,ENSG00000167664:ENST00000595645:exon4:c.G503T:p.W168L	NA	NA	19p13.3	NA	NA	NA	NA	rs58237134	0.17	0.17	0.161	0.178514	0.2068	0.0873	0.1931	0.1543	0.2658	0.19	0.12	0.2	0.19	0.2112	0.21	1	T	0.0	B	0.0	B	.	.	1.000	P	-0.695	N	1.61	T	-0.963	T	0.000	T	0.087	-1.721	0.011	1.86	-0.036	0.579	7.159	-1.720885	NA	1	0.207558	0.176123	NA	0.116	NA	6.7077754
981	11	63885704	63885704	C	T	exonic	FLRT1	NA	synonymous SNV	FLRT1:NM_013280:exon2:c.C1965T:p.Y655Y	exonic	ENSG00000126500	NA	synonymous SNV	ENSG00000126500:ENST00000246841:exon2:c.C1965T:p.Y655Y	Score=634;Name=lod=504	NA	11q13.1	Score=790;Name=V$CDPCR3_01	NA	Name=2	NA	rs677447	0.45	0.45	0.428	0.398562	0.6958	0.3254	0.5346	0.1309	0.4335	0.7	0.31	0.55	0.14	0.5815	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.328998	NA	NA	0.682845	0.219091	NA	0.449	NA	6.7065216
981	14	23892888	23892888	A	G	exonic	MYH7	NA	synonymous SNV	MYH7:NM_000257:exon24:c.T2967C:p.I989I	exonic	ENSG00000092054	NA	synonymous SNV	ENSG00000092054:ENST00000355349:exon24:c.T2967C:p.I989I	Score=722;Name=lod=1147	NA	14q11.2	NA	NA	NA	NA	rs7157716	0.36	0.36	0.357	0.376398	0.3111	0.1667	0.2334	0.7458	0.2618	0.3	0.16	0.26	0.74	0.3212	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.591661	NA	NA	0.328837	0.700409	ID=COSM147748;OCCURENCE=1(stomach)	0.478	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=mult|single;CLNACC=RCV000035835.2|RCV000126991.1;CLNDSDB=.|.;CLNDSDBID=.|.	6.7055296
982	9	137809685	137809685	C	A	exonic	FCN1	NA	synonymous SNV	FCN1:NM_002003:exon1:c.G33T:p.G11G	exonic	ENSG00000085265	NA	synonymous SNV	ENSG00000085265:ENST00000371806:exon1:c.G33T:p.G11G	NA	NA	9q34.3	Score=817;Name=V$PPARG_03	Name=c-Myc,Pol2,Max	NA	NA	rs10858293	0.27	0.27	0.274	0.245607	0.339	0.125	0.2262	0.3313	0.1718	0.35	0.13	0.22	0.33	0.2868	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.287592	NA	NA	0.336512	0.318656	NA	0.268	NA	6.7043546
982	8	27925204	27925204	T	C	exonic	NUGGC	NA	nonsynonymous SNV	NUGGC:NM_001010906:exon6:c.A538G:p.S180G	exonic	ENSG00000189233	NA	nonsynonymous SNV	ENSG00000189233:ENST00000341513:exon6:c.A538G:p.S180G,ENSG00000189233:ENST00000413272:exon6:c.A538G:p.S180G	NA	NA	8p21.1	NA	NA	NA	NA	rs4732620	0.57	0.57	0.561	0.584465	0.5159	0.6101	0.6095	0.6089	0.5777	0.51	0.62	0.56	0.63	0.5706	0.63	0.43	T	0.0	B	0.0	B	0.316	N	1.000	P	-0.855	N	-4.2	D	-0.920	T	0.000	T	0.022	-0.955	0.333	0.743	-0.083	-0.491	1.212	-0.954775	NA	0.86	0.542881	0.596359	NA	0.558	NA	6.7039524
982	11	65392695	65392695	C	T	exonic	PCNXL3	NA	synonymous SNV	PCNXL3:NM_032223:exon17:c.C2973T:p.L991L	exonic	ENSG00000197136	NA	synonymous SNV	ENSG00000197136:ENST00000355703:exon17:c.C2973T:p.L991L	Score=617;Name=lod=428	NA	11q13.1	NA	Name=CTCF	NA	NA	rs1205259	0.26	0.26	0.255	0.235224	0.337	0.1349	0.2421	0.3245	0.1084	0.34	0.12	0.25	0.29	0.2792	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.380014	1.380014	NA	0.346656	0.332651	NA	0.29	NA	6.7038106
982	10	33346697	33346697	C	G	intergenic	ITGB1,NRP1	dist=99404;dist=119722	NA	NA	ncRNA_exonic	ENSG00000235962	NA	NA	NA	Score=778;Name=lod=1927	NA	10p11.22	NA	Name=GATA2_(CG2-96),TAL1_(SC-12984)	Name=4	NA	rs2756018	0.39	0.39	0.402	0.422125	0.2962	0.4127	0.2637	0.6505	0.365	0.28	0.4	0.3	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.11405	NA	NA	NA	NA	NA	0.399	NA	6.7038
982	22	44586522	44586522	C	T	exonic	PARVG	NA	synonymous SNV	PARVG:NM_001137605:exon7:c.C480T:p.V160V,PARVG:NM_022141:exon7:c.C480T:p.V160V	exonic	ENSG00000138964	NA	synonymous SNV	ENSG00000138964:ENST00000356909:exon7:c.C480T:p.V160V,ENSG00000138964:ENST00000415224:exon7:c.C480T:p.V160V,ENSG00000138964:ENST00000422871:exon7:c.C480T:p.V160V,ENSG00000138964:ENST00000444313:exon7:c.C480T:p.V160V	Score=355;Name=lod=37	NA	22q13.31	Score=806;Name=V$CMYB_01	NA	NA	NA	rs2272942	0.21	0.21	0.184	0.17472	0.3618	0.12	0.1758	0.0696	0.18	0.37	0.12	0.21	0.08	0.26	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.319951	NA	NA	0.341628	0.099637	NA	0.239	NA	6.7032386
982	12	49690337	49690337	T	C	intronic	PRPH	NA	NA	NA	ncRNA_exonic	ENSG00000258334	NA	NA	NA	NA	NA	12q13.12	NA	Name=KAP1,c-Myc,CTCF	Name=56	NA	rs2070760	0.24	0.24	0.27	0.258986	0.2038	0.0367	0.1585	0.5976	0.1585	0.21	0.05	0.18	0.57	0.2211	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.277809	1.277809	NA	0.205698	0.534044	NA	0.326	CLINSIG=untested;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000057173.1;CLNDSDB=.;CLNDSDBID=.	6.7027353
982	12	121435342	121435342	C	T	exonic	HNF1A	NA	synonymous SNV	HNF1A:NM_000545:exon7:c.C1375T:p.L459L	exonic	ENSG00000135100	NA	synonymous SNV	ENSG00000135100:ENST00000535955:exon2:c.C91T:p.L31L,ENSG00000135100:ENST00000538626:exon2:c.C121T:p.L41L,ENSG00000135100:ENST00000257555:exon7:c.C1375T:p.L459L,ENSG00000135100:ENST00000400024:exon7:c.C1375T:p.L459L,ENSG00000135100:ENST00000541395:exon7:c.C1375T:p.L459L,ENSG00000135100:ENST00000544413:exon7:c.C1375T:p.L459L	Score=554;Name=lod=237	NA	12q24.31	NA	NA	NA	NA	rs2259820	0.33	0.33	0.309	0.316693	0.3161	0.4732	0.3501	0.1089	0.4131	0.31	0.52	0.36	0.11	0.3368	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.250912	1.250912	NA	0.311119	0.120064	NA	0.217	CLINSIG=probable-non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000117226.2|RCV000125373.1;CLNDSDB=.|.;CLNDSDBID=.|.	6.7026476
982	19	4512669	4512669	T	C	exonic	PLIN4	NA	nonsynonymous SNV	PLIN4:NM_001080400:exon3:c.A1261G:p.T421A	exonic	ENSG00000167676	NA	nonsynonymous SNV	ENSG00000167676:ENST00000301286:exon3:c.A1261G:p.T421A	NA	NA	19p13.3	Score=849;Name=V$GR_Q6	NA	NA	NA	rs55901236	0.5	0.5	0.517	0.454073	0.5696	0.7153	0.4741	0.118	0.5061	0.57	0.71	0.51	0.15	0.5265	0.71	0.16	T	0.009	B	0.008	B	0.002	N	1.000	P	1.42	L	2.45	T	-1.028	T	0.000	T	0.034	1.151	9.686	0.087	-0.085	-0.441	8.645	1.150525	NA	0.52	0.536542	0.208354	NA	0.478	NA	6.7006914
982	19	58946203	58946203	C	T	exonic	ZNF132	NA	nonsynonymous SNV	ZNF132:NM_003433:exon3:c.G608A:p.G203D	exonic	ENSG00000131849	NA	nonsynonymous SNV	ENSG00000131849:ENST00000254166:exon3:c.G608A:p.G203D	NA	NA	19q13.43	NA	NA	NA	NA	rs1122955	0.15	0.15	0.16	0.146166	0.2445	0.0546	0.1772	0.1059	0.1718	0.23	0.06	0.18	0.12	0.1843	0.23	0.49	T	0.0	B	0.0	B	.	.	1.000	P	-0.245	N	2.49	T	-0.905	T	0.000	T	0.054	-1.325	0.033	0.23	-0.007	-0.269	3.782	-1.324593	NA	0.27	0.204767	0.108261	NA	0.167	NA	6.6997664
982	19	55756980	55756980	A	G	exonic	PPP6R1	NA	synonymous SNV	PPP6R1:NM_014931:exon3:c.T294C:p.A98A	exonic	ENSG00000105063	NA	synonymous SNV	ENSG00000105063:ENST00000587283:exon2:c.T294C:p.A98A,ENSG00000105063:ENST00000412770:exon3:c.T294C:p.A98A,ENSG00000105063:ENST00000592242:exon3:c.T294C:p.A98A	NA	NA	19q13.42	Score=858;Name=V$NFE2_01	Name=c-Myc	NA	NA	rs3745920	0.2	0.2	0.177	0.204073	0.336	0.1111	0.2738	0.0635	0.3047	0.33	0.1	0.3	0.07	0.2877	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.997924	NA	NA	0.343385	0.100779	ID=COSM440353;OCCURENCE=2(breast)	0.188	NA	6.6995816
982	17	39681475	39681475	A	G	exonic	KRT19	NA	synonymous SNV	KRT19:NM_002276:exon2:c.T471C:p.N157N	exonic	ENSG00000171345	NA	synonymous SNV	ENSG00000171345:ENST00000361566:exon2:c.T471C:p.N157N,ENSG00000171345:ENST00000455635:exon2:c.T378C:p.N126N	Score=485;Name=lod=125	NA	17q21.2	NA	Name=Pol2-4H8	NA	NA	rs4601	0.71	0.71	0.681	0.731829	0.6471	0.9137	0.7853	0.5908	0.7843	0.63	0.93	0.73	0.58	0.6857	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.159339	NA	NA	0.637093	0.586927	NA	0.754	CLINSIG=untested;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000056946.1;CLNDSDB=.;CLNDSDBID=.	6.6967736
982	22	38164106	38164106	C	T	exonic	TRIOBP	NA	synonymous SNV	TRIOBP:NM_007032:exon9:c.C1359T:p.Y453Y,TRIOBP:NM_001039141:exon19:c.C6498T:p.Y2166Y	exonic	ENSG00000100106	NA	synonymous SNV	ENSG00000100106:ENST00000403663:exon9:c.C1359T:p.Y453Y,ENSG00000100106:ENST00000406386:exon19:c.C6498T:p.Y2166Y	Score=562;Name=lod=256	NA	22q13.1	NA	NA	NA	NA	rs4821708	0.27	0.27	0.259	0.264776	0.336	0.2927	0.2997	0.0408	0.4407	0.34	0.34	0.31	0.05	0.3279	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.366354	2.366354	NA	0.306927	0.075149	ID=COSM444972;OCCURENCE=1(breast)	0.239	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000036833.1;CLNDSDB=.;CLNDSDBID=.	6.6958396
982	2	186670979	186670979	T	C	exonic	FSIP2	NA	nonsynonymous SNV	FSIP2:NM_173651:exon17:c.T17213C:p.I5738T	exonic	ENSG00000188738	NA	nonsynonymous SNV	ENSG00000188738:ENST00000343098:exon17:c.T17213C:p.I5738T,ENSG00000188738:ENST00000424728:exon17:c.T16946C:p.I5649T	NA	NA	2q32.1	NA	NA	NA	NA	rs4666689	0.85	0.85	0.858	0.865815	0.8757	0.878	0.8487	0.8033	0.9397	0.87	0.88	0.85	0.79	0.8752	0.89	0.65	T	.	.	.	.	.	.	1.000	P	-0.805	N	1.01	T	-0.991	T	0.000	T	0.006	0.032	4.182	-3.53	-0.800	-1.929	0.812	0.032483	NA	0.7	0.887105	0.809135	NA	0.891	NA	6.6953284
983	2	207006676	207006676	T	C	exonic	NDUFS1	NA	synonymous SNV	NDUFS1:NM_001199982:exon9:c.A918G:p.R306R,NDUFS1:NM_001199981:exon11:c.A1143G:p.R381R,NDUFS1:NM_001199983:exon11:c.A1080G:p.R360R,NDUFS1:NM_001199984:exon12:c.A1293G:p.R431R,NDUFS1:NM_005006:exon12:c.A1251G:p.R417R	exonic	ENSG00000023228	NA	synonymous SNV	ENSG00000023228:ENST00000457011:exon8:c.A903G:p.R301R,ENSG00000023228:ENST00000432169:exon9:c.A918G:p.R306R,ENSG00000023228:ENST00000423725:exon11:c.A1080G:p.R360R,ENSG00000023228:ENST00000440274:exon11:c.A1143G:p.R381R,ENSG00000023228:ENST00000233190:exon12:c.A1251G:p.R417R,ENSG00000023228:ENST00000449699:exon12:c.A1251G:p.R417R,ENSG00000023228:ENST00000455934:exon12:c.A1293G:p.R431R	Score=686;Name=lod=815	NA	2q33.3	NA	NA	NA	NA	rs1801318	0.33	0.33	0.317	0.309904	0.341	0.2133	0.2882	0.4508	0.2025	0.34	0.21	0.34	0.44	0.3105	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.011158	NA	NA	0.320349	0.438947	NA	0.268	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117709.2;CLNDSDB=.;CLNDSDBID=.	6.6948176
983	1	152279729	152279729	C	T	exonic	FLG	NA	nonsynonymous SNV	FLG:NM_002016:exon3:c.G7633A:p.G2545R	exonic	ENSG00000143631	NA	nonsynonymous SNV	ENSG00000143631:ENST00000368799:exon3:c.G7633A:p.G2545R	NA	NA	1q21.3	NA	NA	NA	NA	rs3126072	0.4	0.4	0.356	0.47484	0.173	0.6548	0.451	0.5658	0.4939	0.18	0.63	0.37	0.52	0.2974	0.63	0.57	T	0.0	B	0.0	B	.	.	1.000	P	-1.74	N	4.68	T	-1.054	T	0.000	T	0.028	-0.235	2.868	0.755	-0.360	-0.243	4.444	-0.234541	NA	0.29	0.169419	0.499545	NA	0.254	NA	6.6935144
983	19	33110204	33110204	T	C	exonic	ANKRD27	NA	nonsynonymous SNV	ANKRD27:NM_032139:exon20:c.A1969G:p.S657G	exonic	ENSG00000105186	NA	nonsynonymous SNV	ENSG00000105186:ENST00000306065:exon20:c.A1969G:p.S657G	NA	NA	19q13.11	NA	NA	NA	NA	rs2287669	0.46	0.46	0.446	0.460264	0.5646	0.2877	0.3775	0.5136	0.5174	0.58	0.28	0.43	0.51	0.5069	0.58	0.38	T	0.435	B	0.078	B	0.149	N	1.000	P	1.78	L	-0.04	T	-0.903	T	0.000	T	0.011	-0.127	3.378	1.85	0.064	1.097	3.973	-0.126979	NA	0.43	0.568372	0.522696	NA	0.536	NA	6.6934614
983	9	5801121	5801121	A	G	intronic	ERMP1	NA	NA	NA	intronic	ENSG00000099219	NA	NA	NA	NA	NA	9p24.1	Score=840;Name=V$MRF2_01	Name=FOXA1_(C-20)	Name=50	NA	rs3824444	0.41	0.41	0.355	0.391573	0.3072	0.7282	0.4164	0.1467	0.4448	0.33	0.76	0.43	0.13	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.305475	NA	NA	NA	NA	NA	0.355	NA	6.6928
983	2	159992699	159992699	C	T	intronic	TANC1	NA	NA	NA	intronic	ENSG00000115183	NA	NA	NA	Score=658;Name=lod=628	NA	2q24.2	NA	Name=p300,c-Jun,ERalpha_a	Name=107	NA	rs2288105	0.23	0.23	0.22	0.226238	0.0845	0.4554	0.2608	0.1823	0.1708	0.1	0.47	0.18	0.18	0.1485	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.454256	2.454256	NA	0.07428	0.157606	NA	0.159	NA	6.69272
983	6	159655084	159655084	C	G	exonic	FNDC1	NA	nonsynonymous SNV	FNDC1:NM_032532:exon11:c.C3540G:p.D1180E	exonic	ENSG00000164694	NA	nonsynonymous SNV	ENSG00000164694:ENST00000340366:exon10:c.C3351G:p.D1117E,ENSG00000164694:ENST00000297267:exon11:c.C3540G:p.D1180E	Score=300;Name=lod=22	NA	6q25.3	NA	NA	NA	NA	rs420054	0.8	0.8	0.775	0.782348	0.9085	0.626	0.8602	0.7103	0.8558	0.92	0.63	0.88	0.75	0.8367	0.92	1	T	0.0	B	0.002	B	0.117	N	1.000	P	-0.345	N	3.87	T	-0.993	T	0.018	T	0.133	-0.237	2.857	2.74	0.444	-0.066	8.459	-0.236916	NA	0.66	0.895957	0.75937	NA	0.587	NA	6.6921764
983	2	208478055	208478055	A	G	exonic	METTL21A	NA	synonymous SNV	METTL21A:NM_001127395:exon4:c.T372C:p.T124T,METTL21A:NM_145280:exon4:c.T372C:p.T124T	exonic	ENSG00000144401	NA	synonymous SNV	ENSG00000144401:ENST00000426075:exon3:c.T372C:p.T124T,ENSG00000144401:ENST00000272839:exon4:c.T426C:p.T142T,ENSG00000144401:ENST00000406927:exon4:c.T372C:p.T124T,ENSG00000144401:ENST00000411432:exon4:c.T372C:p.T124T,ENSG00000144401:ENST00000442521:exon4:c.T372C:p.T124T,ENSG00000144401:ENST00000448007:exon4:c.T372C:p.T124T	Score=479;Name=lod=118	NA	2q33.3	Score=868;Name=V$ATF6_01	NA	NA	NA	rs17520056	0.31	0.31	0.287	0.347644	0.3072	0.372	0.3617	0.233	0.5092	0.31	0.37	0.3	0.24	0.3522	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.132907	NA	NA	0.316744	0.249433	ID=COSM149049;OCCURENCE=1(stomach)	0.478	NA	6.6905226
983	22	22707597	22707597	A	G	intergenic	LOC96610,ZNF280B	dist=30273;dist=131175	NA	NA	exonic	ENSG00000211647	NA	nonsynonymous SNV	ENSG00000211647:ENST00000390293:exon2:c.A185G:p.E62G	Score=300;Name=lod=22	NA	22q11.22	NA	NA	NA	NA	NA	NA	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.143	0.054	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.517505	NA	1	NA	NA	NA	0.101	NA	6.6903334
983	21	34945721	34945721	T	C	exonic	SON	NA	synonymous SNV	SON:NM_138927:exon9:c.T6993C:p.N2331N	exonic	ENSG00000159140	NA	synonymous SNV	ENSG00000159140:ENST00000381692:exon8:c.T1077C:p.N359N,ENSG00000159140:ENST00000356577:exon9:c.T6993C:p.N2331N	Score=684;Name=lod=806	NA	21q22.11	NA	NA	NA	NA	rs3174808	0.29	0.29	0.264	0.289537	0.328	0.249	0.3242	0.2474	0.3241	0.34	0.26	0.28	0.25	0.3229	0.35	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.990	T	0.000	T	.	0.338	5.834	1.81	0.447	0.026	9.543	0.338035	NA	NA	0.326315	0.256241	NA	0.391	NA	6.6894516
983	9	107457532	107457532	C	T	exonic	OR13D1	NA	nonsynonymous SNV	OR13D1:NM_001004484:exon1:c.C830T:p.S277L	exonic	ENSG00000179055	NA	nonsynonymous SNV	ENSG00000179055:ENST00000318763:exon1:c.C830T:p.S277L	NA	NA	9q31.1	NA	NA	NA	NA	rs10761073	0.74	0.74	0.737	0.765775	0.506	0.9901	0.6643	0.8593	0.7474	0.52	0.99	0.66	0.83	0.6243	0.99	1	T	0.003	B	0.0	B	0.003	N	1.000	P	-4.525	N	1.7	T	-0.920	T	0.000	T	0.058	-2.996	0.001	1.4	-0.522	4.054	5.141	-2.996412	NA	1	0.515	0.816841	NA	0.652	NA	6.6880334
983	18	31320229	31320229	A	G	exonic	ASXL3	NA	nonsynonymous SNV	ASXL3:NM_030632:exon11:c.A2861G:p.N954S	exonic	ENSG00000141431	NA	nonsynonymous SNV	ENSG00000141431:ENST00000269197:exon11:c.A2861G:p.N954S	Score=325;Name=lod=28	NA	18q12.1	NA	NA	NA	NA	rs2282632	0.7	0.7	0.696	0.703275	0.5249	0.8988	0.6916	0.8094	0.5501	0.52	0.9	0.66	0.78	0.6029	0.9	0.8	T	0.003	B	0.002	B	0.273	N	0.997	P	0.895	L	0.81	T	-0.979	T	0.000	T	0.047	1.201	9.879	0.361	0.109	0.405	5.884	1.200986	NA	0.07	0.517805	0.784632	NA	0.717	NA	6.6877284
983	7	73097238	73097238	G	A	exonic	DNAJC30	NA	synonymous SNV	DNAJC30:NM_032317:exon1:c.C516T:p.Y172Y	exonic	ENSG00000176410	NA	synonymous SNV	ENSG00000176410:ENST00000395176:exon1:c.C516T:p.Y172Y	Score=521;Name=lod=175	NA	7q11.23	NA	Name=E2F6_(H-50)	NA	NA	rs1569062	0.23	0.23	0.21	0.232228	0.337	0.1746	0.3473	0.0325	0.3722	0.33	0.18	0.36	0.02	0.3043	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.967379	1.967379	NA	0.338023	0.081934	NA	0.196	NA	6.6873436
983	3	112059768	112059768	C	G	exonic	CD200	NA	nonsynonymous SNV	CD200:NM_005944:exon2:c.C32G:p.S11C,CD200:NM_001004196:exon3:c.C107G:p.S36C	exonic	ENSG00000091972	NA	nonsynonymous SNV	ENSG00000091972:ENST00000315711:exon2:c.C32G:p.S11C,ENSG00000091972:ENST00000498096:exon2:c.C32G:p.S11C,ENSG00000091972:ENST00000607597:exon2:c.C11G:p.S4C,ENSG00000091972:ENST00000473539:exon3:c.C107G:p.S36C	Score=376;Name=lod=45	NA	3q13.2	NA	NA	NA	NA	rs1131199	0.63	0.63	0.636	0.660343	0.5089	0.7063	0.5519	0.7753	0.6902	0.51	0.72	0.54	0.76	0.5991	0.76	1	T	0.0	B	0.0	B	0.041	N	0.001	P	-1.1	N	1.28	T	-0.973	T	0.000	T	0.07	-1.024	0.227	-0.608	-0.219	0.242	4.712	-1.023829	NA	1	0.538372	0.751929	NA	0.536	NA	6.6869614
983	20	37534665	37534665	C	T	exonic	PPP1R16B	NA	synonymous SNV	PPP1R16B:NM_015568:exon7:c.C750T:p.D250D	exonic	ENSG00000101445	NA	synonymous SNV	ENSG00000101445:ENST00000299824:exon7:c.C750T:p.D250D	Score=472;Name=lod=110	NA	20q11.23	Score=884;Name=V$P300_01	NA	NA	NA	rs4812332	0.35	0.35	0.346	0.345248	0.336	0.4167	0.3746	0.2995	0.3221	0.34	0.37	0.37	0.34	0.3219	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.651786	NA	NA	0.322093	0.318202	NA	0.254	NA	6.6866736
983	17	72584764	72584764	C	T	exonic	CD300LD	NA	nonsynonymous SNV	CD300LD:NM_001115152:exon2:c.G265A:p.V89M	exonic	ENSG00000204345	NA	nonsynonymous SNV	ENSG00000204345:ENST00000375352:exon2:c.G265A:p.V89M	NA	NA	17q25.1	NA	NA	NA	NA	rs783239	0.32	0.32	0.334	0.342452	0.1829	0.249	0.2161	0.6604	0.2628	0.19	0.23	0.24	0.67	0.2513	0.67	0.19	T	0.083	B	0.046	B	0.153	N	1.000	P	1.83	L	-0.15	T	-0.907	T	0.000	T	0.021	1.054	9.306	-0.509	-0.727	-0.650	4.886	1.054409	NA	0.09	0.213428	0.566645	ID=COSM148338;OCCURENCE=1(stomach)	0.333	NA	6.6857054
983	16	90095561	90095561	C	T	exonic	C16orf3	NA	nonsynonymous SNV	C16orf3:NM_001214:exon1:c.G190A:p.V64I	exonic	ENSG00000221819	NA	nonsynonymous SNV	ENSG00000221819:ENST00000408886:exon1:c.G190A:p.V64I	NA	NA	16q24.3	NA	NA	NA	NA	rs3785183	0.29	0.29	0.282	0.33107	0.335	0.1687	0.3127	0.3638	0.4632	0.31	0.18	0.29	0.4	0.313	0.4	.	.	0.13	B	0.003	B	.	.	1.000	P	0	N	0.54	T	-0.922	T	0.000	T	0.045	-0.389	2.174	0.438	0.197	-0.385	5.555	-0.38926	NA	NA	NA	NA	ID=COSM1128837;OCCURENCE=1(prostate)	0.167	NA	6.6853334
983	3	111260975	111260975	C	T	UTR5	CD96	NM_005816:c.-121C>T,NM_198196:c.-121C>T	NA	NA	UTR5	ENSG00000153283	ENST00000352690:c.-121C>T,ENST00000283285:c.-121C>T	NA	NA	NA	NA	3q13.13	Score=909;Name=V$FOXO4_01	Name=NFKB	Name=55	NA	rs2276873	0.48	0.48	0.441	0.458866	0.6481	0.4831	0.5317	0.1732	0.5736	0.65	0.49	0.52	0.18	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.177247	NA	NA	NA	NA	NA	0.558	NA	6.6852334
983	12	133732624	133732624	C	T	exonic	ZNF10	NA	synonymous SNV	ZNF10:NM_015394:exon5:c.C792T:p.P264P	exonic	ENSG00000256223	NA	synonymous SNV	ENSG00000256223:ENST00000248211:exon5:c.C792T:p.P264P,ENSG00000256223:ENST00000426665:exon5:c.C792T:p.P264P	Score=455;Name=lod=94	NA	12q24.33	NA	NA	Name=16	NA	rs3763151	0.29	0.29	0.289	0.293131	0.34	0.1111	0.2608	0.4402	0.2566	0.35	0.08	0.27	0.46	0.3121	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.645988	NA	NA	0.329535	0.41103	NA	0.377	NA	6.6850316
984	12	26749831	26749831	G	A	exonic	ITPR2	NA	synonymous SNV	ITPR2:NM_002223:exon31:c.C4239T:p.D1413D	exonic	ENSG00000123104	NA	synonymous SNV	ENSG00000123104:ENST00000381340:exon31:c.C4239T:p.D1413D	Score=696;Name=lod=900	NA	12p11.23	Score=837;Name=V$CHOP_01	NA	NA	NA	rs2230377	0.19	0.19	0.188	0.179313	0.3579	0.0476	0.1599	0.0938	0.2607	0.35	0.04	0.18	0.14	0.2815	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.771409	NA	NA	0.34235	0.127073	NA	0.167	NA	6.6849166
984	16	58587737	58587737	C	T	exonic	CNOT1	NA	synonymous SNV	CNOT1:NM_001265612:exon22:c.G2904A:p.Q968Q,CNOT1:NM_016284:exon22:c.G2919A:p.Q973Q,CNOT1:NM_206999:exon22:c.G2919A:p.Q973Q	exonic	ENSG00000125107	NA	synonymous SNV	ENSG00000125107:ENST00000317147:exon22:c.G2919A:p.Q973Q,ENSG00000125107:ENST00000441024:exon22:c.G2919A:p.Q973Q,ENSG00000125107:ENST00000567188:exon22:c.G2904A:p.Q968Q,ENSG00000125107:ENST00000569240:exon22:c.G2904A:p.Q968Q	Score=661;Name=lod=650	NA	16q21	Score=834;Name=V$MRF2_01	NA	NA	NA	rs11866002	0.46	0.46	0.467	0.485224	0.3211	0.5704	0.2983	0.6687	0.4509	0.32	0.59	0.3	0.66	0.3683	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.937265	NA	NA	0.292442	0.604641	NA	0.399	NA	6.6848246
984	6	167796309	167796309	C	T	exonic	TCP10	NA	nonsynonymous SNV	TCP10:NM_004610:exon2:c.G53A:p.G18E	exonic	ENSG00000203690	NA	nonsynonymous SNV	ENSG00000203690:ENST00000485157:exon1:c.G53A:p.G18E,ENSG00000203690:ENST00000366827:exon2:c.G53A:p.G18E,ENSG00000203690:ENST00000397829:exon2:c.G53A:p.G18E,ENSG00000203690:ENST00000476779:exon3:c.G53A:p.G18E	NA	NA	6q27	NA	NA	NA	NA	rs17855834	0.25	0.25	0.196	0.236422	0.1958	0.3839	0.2579	0.1747	0.1943	0.19	0.4	0.24	0.19	0.2467	0.4	1	T	0.447	B	0.174	B	.	.	1.000	P	0.805	L	2.14	T	-0.991	T	0.012	T	0.344	-1.836	0.009	0.806	0.073	0.398	3.534	-1.836301	NA	0.67	0.210047	0.214484	NA	0.174	NA	6.6807864
984	19	18679379	18679379	C	G	exonic	KXD1	NA	nonsynonymous SNV	KXD1:NM_001171949:exon5:c.C469G:p.P157A,KXD1:NM_024069:exon5:c.C469G:p.P157A,KXD1:NM_001171948:exon6:c.C469G:p.P157A	exonic	ENSG00000105700	NA	nonsynonymous SNV	ENSG00000105700:ENST00000222307:exon5:c.C469G:p.P157A,ENSG00000105700:ENST00000539106:exon5:c.C469G:p.P157A,ENSG00000105700:ENST00000595073:exon5:c.C469G:p.P157A,ENSG00000105700:ENST00000597438:exon5:c.C469G:p.P157A,ENSG00000105700:ENST00000599319:exon5:c.C469G:p.P157A,ENSG00000105700:ENST00000600654:exon5:c.C469G:p.P157A,ENSG00000105700:ENST00000602094:exon5:c.C469G:p.P157A,ENSG00000105700:ENST00000540691:exon6:c.C469G:p.P157A,ENSG00000105700:ENST00000601630:exon6:c.C526G:p.P176A	NA	NA	19p13.11	NA	NA	NA	NA	rs7648	0.5	0.5	0.448	0.46246	0.5606	0.6895	0.5533	0.146	0.4908	0.58	0.68	0.52	0.17	0.5288	0.68	0.7	T	0.131	B	0.039	B	0.018	N	1.000	P	0.69	N	1.0	T	-0.958	T	0.000	T	0.124	-0.308	2.533	2.41	0.346	0.467	6.639	-0.308095	NA	1	0.563837	0.201089	NA	0.377	NA	6.6800964
984	14	39716201	39716201	A	G	exonic	MIA2	NA	nonsynonymous SNV	MIA2:NM_054024:exon4:c.A423G:p.I141M	exonic	ENSG00000150526,ENSG00000258941	NA	nonsynonymous SNV	ENSG00000150526:ENST00000280082:exon4:c.A423G:p.I141M,ENSG00000258941:ENST00000553728:exon4:c.A423G:p.I141M,ENSG00000150526:ENST00000556784:exon4:c.A420G:p.I140M	NA	NA	14q21.1	NA	NA	NA	NA	rs11845046	0.26	0.26	0.253	0.238219	0.2127	0.502	0.183	0.1407	0.1636	0.2	0.51	0.2	0.12	0.2326	0.51	.	.	0.017	B	0.005	B	0.505	N	1.000	P	0.665	N	3.26	T	-0.905	T	0.000	T	0.076	-0.257	2.767	-1.41	0.079	0.264	3.133	-0.256608	NA	0.13	0.208227	0.167123	NA	0.13	NA	6.6798064
984	14	106866465	106866465	A	G	intergenic	LINC00226,LINC00221	dist=121499;dist=71990	NA	NA	exonic	ENSG00000211958	NA	nonsynonymous SNV	ENSG00000211958:ENST00000390618:exon2:c.T289C:p.Y97H	Score=376;Name=lod=45	NA	14q32.33	NA	Name=CTCF	NA	NA	rs78660098	NA	NA	0.107	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.1546	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.82062	NA	0.02	NA	NA	NA	0.014	NA	6.6787334
984	16	21994411	21994411	G	A	exonic	UQCRC2	NA	synonymous SNV	UQCRC2:NM_003366:exon14:c.G1281A:p.A427A	exonic	ENSG00000140740	NA	nonsynonymous SNV	ENSG00000140740:ENST00000561553:exon13:c.G1127A:p.R376Q	Score=578;Name=lod=297	NA	16p12.2	NA	NA	NA	NA	rs7282	0.08	0.08	0.097	0.108826	0.0994	0.124	0.049	0.0121	0.2761	0.1	0.13	0.04	0.02	0.1162	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.684908	3.684908	NA	0.105698	0.031165	NA	0.051	NA	6.678702
984	10	99160152	99160152	A	G	exonic	RRP12	NA	synonymous SNV	RRP12:NM_001145114:exon2:c.T279C:p.G93G,RRP12:NM_015179:exon2:c.T279C:p.G93G	exonic	ENSG00000052749	NA	synonymous SNV	ENSG00000052749:ENST00000315563:exon2:c.T279C:p.G93G,ENSG00000052749:ENST00000370992:exon2:c.T279C:p.G93G,ENSG00000052749:ENST00000414986:exon2:c.T279C:p.G93G	NA	NA	10q24.1	NA	Name=CEBPB,GABP,TAF1,Pol2	Name=137	NA	rs1048442	0.37	0.37	0.377	0.400559	0.336	0.3125	0.3444	0.5378	0.4121	0.33	0.28	0.33	0.56	0.3381	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.504722	NA	NA	0.316512	0.497049	NA	0.304	NA	6.6760546
984	4	190862182	190862182	C	T	exonic	FRG1	NA	synonymous SNV	FRG1:NM_004477:exon1:c.C18T:p.Y6Y	exonic	ENSG00000109536	NA	synonymous SNV	ENSG00000109536:ENST00000226798:exon1:c.C18T:p.Y6Y,ENSG00000109536:ENST00000533157:exon1:c.C18T:p.Y6Y	NA	NA	4q35.2	NA	Name=TBP,GTF2F1_(RAP-74),NFKB,HEY1,Pol2-4H8,Pol2,Pol2(b),TAF1	Name=20	NA	rs2411530	0.48	0.48	0.45	0.464257	0.3231	0.3938	0.2752	0.7716	0.4008	0.37	0.41	0.38	0.79	0.3495	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.583424	NA	NA	0.318488	0.729914	NA	0.08	NA	6.6755786
984	2	148657117	148657117	G	A	exonic	ACVR2A	NA	synonymous SNV	ACVR2A:NM_001616:exon3:c.G354A:p.P118P	exonic	ENSG00000121989	NA	synonymous SNV	ENSG00000121989:ENST00000241416:exon3:c.G354A:p.P118P,ENSG00000121989:ENST00000535787:exon3:c.G30A:p.P10P,ENSG00000121989:ENST00000404590:exon4:c.G354A:p.P118P	Score=655;Name=lod=614	NA	2q22.3	Score=816;Name=V$STAT3_01	NA	NA	NA	rs1128919	0.39	0.39	0.359	0.352636	0.327	0.4673	0.4611	0.2852	0.2751	0.35	0.47	0.44	0.3	0.3493	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.124787	2.124787	NA	0.31519	0.310627	NA	0.478	NA	6.6751766
985	6	30313029	30313029	C	T	intronic	RPP21,TRIM39-RPP21	NA	NA	NA	exonic	ENSG00000241370	NA	synonymous SNV	ENSG00000241370:ENST00000428040:exon1:c.C81T:p.H27H	NA	NA	6p22.1	NA	Name=E2F6_(H-50),ETS1,Pol2(b),TAF1,POU2F2,ZBTB33,HMGN3,GABP,NRSF,SP1,CTCF_(SC-5916),Pol2,YY1,Sin3Ak-20,HA-E2F1,YY1_(C-20),Pol2-4H8,ZNF263,HDAC2_(SC-6296),c-Myc,CCNT2,ZBTB7A_(SC-34508),NFKB,ZEB1_(SC-25388),HEY1,ELF1_(SC-631),PAX5-C20,Oct-2,TBP,CHD2_(N-1250),GTF2F1_(RAP-74),IRF1	Name=140	NA	rs45626136	0.04	0.04	0.028	0.0347444	0.0636	0.0476	0.0231	0.0023	0.044	0.07	0.05	0.02	0.01	0.051	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.467186	NA	NA	0.044323	0.010894	NA	0.022	NA	6.6744103
985	2	43801712	43801712	A	G	exonic	THADA	NA	synonymous SNV	THADA:NM_001083953:exon11:c.T1492C:p.L498L,THADA:NM_001271643:exon11:c.T1492C:p.L498L,THADA:NM_001271644:exon11:c.T1492C:p.L498L,THADA:NM_022065:exon11:c.T1492C:p.L498L	exonic	ENSG00000115970	NA	synonymous SNV	ENSG00000115970:ENST00000402796:exon1:c.T241C:p.L81L,ENSG00000115970:ENST00000330266:exon2:c.T622C:p.L208L,ENSG00000115970:ENST00000402360:exon10:c.T1492C:p.L498L,ENSG00000115970:ENST00000404790:exon11:c.T1492C:p.L498L,ENSG00000115970:ENST00000405006:exon11:c.T1492C:p.L498L,ENSG00000115970:ENST00000405975:exon11:c.T1492C:p.L498L,ENSG00000115970:ENST00000415080:exon11:c.T622C:p.L208L,ENSG00000115970:ENST00000403856:exon12:c.T1492C:p.L498L	Score=528;Name=lod=186	NA	2p21	Score=861;Name=V$STAT5A_01	NA	NA	NA	rs11899823	0.32	0.32	0.326	0.344649	0.34	0.2649	0.2305	0.3986	0.4397	0.34	0.29	0.26	0.39	0.3134	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.014909	NA	NA	0.339395	0.366955	NA	0.341	NA	6.6738716
985	21	44837555	44837555	G	A	exonic	SIK1	NA	nonsynonymous SNV	SIK1:NM_173354:exon13:c.C1844T:p.A615V	exonic	ENSG00000142178	NA	nonsynonymous SNV	ENSG00000142178:ENST00000270162:exon13:c.C1844T:p.A615V	NA	NA	21q22.3	NA	NA	NA	NA	rs430554	0.84	0.84	0.876	0.830671	0.8797	0.8958	0.9092	0.7057	0.8262	0.87	0.88	0.88	0.73	0.89	0.89	0.21	T	0.281	B	0.075	B	0.280	U	1.000	P	1.15	L	-0.59	T	-1.004	T	0.000	T	0.027	0.967	8.946	2.25	0.421	5.716	10.627	0.966961	NA	NA	0.890087	0.757401	NA	0.717	NA	6.6735464
985	16	55519535	55519535	G	C	exonic	MMP2	NA	synonymous SNV	MMP2:NM_001127891:exon5:c.G528C:p.G176G,MMP2:NM_004530:exon5:c.G678C:p.G226G	exonic	ENSG00000087245	NA	synonymous SNV	ENSG00000087245:ENST00000219070:exon5:c.G678C:p.G226G,ENSG00000087245:ENST00000437642:exon5:c.G528C:p.G176G,ENSG00000087245:ENST00000543485:exon5:c.G450C:p.G150G,ENSG00000087245:ENST00000564864:exon5:c.G450C:p.G150G,ENSG00000087245:ENST00000570308:exon6:c.G450C:p.G150G	Score=618;Name=lod=433	NA	16q12.2	Score=948;Name=V$IK2_01	NA	NA	NA	rs1132896	0.24	0.24	0.208	0.20008	0.3469	0.13	0.3919	0.031	0.2137	0.38	0.15	0.37	0.03	0.3013	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.897697	NA	NA	0.345116	0.08394	NA	0.217	NA	6.6733506
985	16	69782855	69782855	C	T	exonic	NOB1	NA	nonsynonymous SNV	NOB1:NM_014062:exon6:c.G692A:p.R231Q	exonic	ENSG00000141101	NA	nonsynonymous SNV	ENSG00000141101:ENST00000268802:exon6:c.G692A:p.R231Q	NA	NA	16q22.1	Score=784;Name=V$ARNT_02	NA	NA	NA	rs3811348	0.37	0.37	0.357	0.34385	0.5736	0.2341	0.4899	0.0983	0.4489	0.6	0.23	0.48	0.12	0.5178	0.6	.	.	0.003	B	0.002	B	0.283	N	1.000	P	-1.37	N	1.69	T	-0.968	T	0.000	T	0.041	0.32	5.737	1.11	0.315	-0.419	4.622	0.320468	NA	0.39	0.570465	0.180164	NA	0.297	NA	6.6714684
985	1	7913430	7913430	G	A	exonic	UTS2	NA	nonsynonymous SNV	UTS2:NM_021995:exon1:c.C62T:p.T21M	exonic	ENSG00000049247	NA	nonsynonymous SNV	ENSG00000049247:ENST00000054668:exon1:c.C62T:p.T21M	NA	NA	1p36.23	NA	NA	NA	NA	rs228648	0.46	0.46	0.491	0.478435	0.5706	0.3522	0.4092	0.4259	0.6339	0.58	0.32	0.46	0.43	0.5229	0.58	0.12	T	0.216	B	0.023	B	.	.	1.000	P	.	.	1.34	T	-0.943	T	0.000	T	0.053	0.439	6.386	-3.06	-0.941	-0.446	10.906	0.439311	NA	0.03	0.569186	0.474126	NA	0.558	NA	6.6706474
985	10	37505159	37505159	G	A	exonic	ANKRD30A	NA	nonsynonymous SNV	ANKRD30A:NM_052997:exon32:c.G2752A:p.A918T	exonic	ENSG00000148513	NA	nonsynonymous SNV	ENSG00000148513:ENST00000361713:exon32:c.G2752A:p.A918T,ENSG00000148513:ENST00000602533:exon32:c.G2752A:p.A918T,ENSG00000148513:ENST00000374660:exon38:c.G3109A:p.A1037T	NA	NA	10p11.21	NA	NA	NA	NA	rs34552277	0.23	0.23	0.247	0.227636	0.2227	0.1558	0.1556	0.4145	0.1053	0.22	0.14	0.2	0.39	0.2069	0.39	0.57	T	0.127	B	0.04	B	.	.	1.000	P	0.145	N	3.31	T	-0.937	T	0.000	T	0.045	-0.804	0.666	-0.004	-0.250	-0.375	3.881	-0.803974	NA	0.23	0.233358	0.391075	NA	0.275	NA	6.6703754
985	7	1131411	1131411	C	T	exonic	GPER	NA	nonsynonymous SNV	GPER:NM_001098201:exon2:c.C47T:p.P16L,GPER:NM_001505:exon2:c.C47T:p.P16L,GPER:NM_001039966:exon3:c.C47T:p.P16L	exonic	ENSG00000164850	NA	nonsynonymous SNV	ENSG00000164850:ENST00000297469:exon2:c.C47T:p.P16L,ENSG00000164850:ENST00000397088:exon2:c.C47T:p.P16L,ENSG00000164850:ENST00000401670:exon2:c.C47T:p.P16L,ENSG00000164850:ENST00000397092:exon3:c.C47T:p.P16L,ENSG00000164850:ENST00000413368:exon3:c.C47T:p.P16L	NA	NA	7p22.3	NA	NA	NA	NA	rs11544331	0.15	0.15	0.154	0.138978	0.2048	0.0248	0.2104	0.1021	0.1881	0.22	0.03	0.18	0.14	0.2133	0.27	0.26	T	0.001	B	0.001	B	0.408	N	1.000	P	0	N	1.03	T	-1.067	T	0.000	T	0.263	1.491	10.93	-0.101	-0.347	0.053	8.877	1.490502	1.490502	0.18	0.244884	0.115123	NA	0.254	NA	6.6703494
985	6	26045929	26045929	T	C	exonic	HIST1H3C	NA	synonymous SNV	HIST1H3C:NM_003531:exon1:c.T291C:p.C97C	exonic	ENSG00000196532	NA	synonymous SNV	ENSG00000196532:ENST00000540144:exon1:c.T291C:p.C97C	Score=741;Name=lod=1373	NA	6p22.2	NA	Name=CTCF,NFKB,HEY1,ELF1_(SC-631),CTCF_(C-20),Pol2,Pol2(phosphoS2),BCLAF1_(M33-P5B11),Pol2-4H8,ZBTB33,USF2	Name=134	NA	rs3752416	0.72	0.72	0.658	0.705272	0.6531	0.8423	0.6902	0.7133	0.6176	0.64	0.87	0.68	0.71	0.6713	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.266311	NA	NA	0.673953	0.718793	NA	0.645	NA	6.6683136
985	16	1614097	1614097	A	G	exonic	IFT140	NA	synonymous SNV	IFT140:NM_014714:exon17:c.T1968C:p.S656S	exonic	ENSG00000187535	NA	synonymous SNV	ENSG00000187535:ENST00000426508:exon17:c.T1968C:p.S656S	NA	NA	16p13.3	Score=843;Name=V$GR_Q6	NA	NA	NA	rs8048410	0.46	0.46	0.471	0.505192	0.2982	0.5675	0.3934	0.7179	0.4458	0.29	0.54	0.38	0.71	0.3909	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.634243	NA	NA	0.31	0.643929	NA	0.406	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117257.2;CLNDSDB=.;CLNDSDBID=.	6.6675666
985	19	50358133	50358133	T	G	exonic	PTOV1	NA	synonymous SNV	PTOV1:NM_017432:exon4:c.T438G:p.P146P	exonic	ENSG00000104960	NA	synonymous SNV	ENSG00000104960:ENST00000600793:exon3:c.T267G:p.P89P,ENSG00000104960:ENST00000221557:exon4:c.T342G:p.P114P,ENSG00000104960:ENST00000391842:exon4:c.T438G:p.P146P,ENSG00000104960:ENST00000594151:exon4:c.T483G:p.P161P,ENSG00000104960:ENST00000599732:exon4:c.T438G:p.P146P,ENSG00000104960:ENST00000600603:exon4:c.T342G:p.P114P,ENSG00000104960:ENST00000601612:exon4:c.T342G:p.P114P,ENSG00000104960:ENST00000601638:exon4:c.T342G:p.P114P,ENSG00000104960:ENST00000601675:exon4:c.T438G:p.P146P	Score=557;Name=lod=245	NA	19q13.33	Score=888;Name=V$E47_02	NA	NA	NA	rs75478119	0.3	0.3	0.308	0.359425	0.3171	0.2877	0.2392	0.4123	0.4908	0.31	0.28	0.25	0.35	0.3422	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.762087	NA	NA	0.339846	0.403314	NA	0.167	NA	6.6675206
985	20	1459060	1459060	T	G	exonic	SIRPB2	NA	nonsynonymous SNV	SIRPB2:NM_001122962:exon3:c.A644C:p.E215A,SIRPB2:NM_001134836:exon3:c.A350C:p.E117A	exonic	ENSG00000196209	NA	nonsynonymous SNV	ENSG00000196209:ENST00000359801:exon3:c.A644C:p.E215A,ENSG00000196209:ENST00000381630:exon3:c.A350C:p.E117A,ENSG00000196209:ENST00000444444:exon3:c.A350C:p.E117A,ENSG00000196209:ENST00000481731:exon3:c.A644C:p.E215A,ENSG00000196209:ENST00000486775:exon3:c.A644C:p.E215A,ENSG00000196209:ENST00000537284:exon4:c.A230C:p.E77A	NA	Name=Circulating myeloperoxidase levels (serum)	20p13	NA	NA	NA	NA	rs6042507	0.93	0.93	0.934	0.953075	0.8658	0.996	0.9193	0.9864	0.9775	0.86	0.99	0.91	0.98	0.915	0.99	0.46	T	0.0	B	0.001	B	0.746	N	1.000	P	0.425	N	-0.15	T	-0.979	T	0.000	T	0.06	-0.495	1.729	2.96	0.251	0.665	3.080	-0.494639	NA	0.34	0.88526	0.977679	NA	0.964	NA	6.6672734
985	19	43243238	43243238	A	G	exonic	PSG3	NA	nonsynonymous SNV	PSG3:NM_021016:exon2:c.T68C:p.L23S	exonic	ENSG00000221826	NA	nonsynonymous SNV	ENSG00000221826:ENST00000327495:exon2:c.T68C:p.L23S,ENSG00000221826:ENST00000595140:exon2:c.T68C:p.L23S	Score=304;Name=lod=23	NA	19q13.2	NA	NA	NA	NA	rs11559136	0.56	0.56	0.48	0.656949	0.5507	0.4772	0.6571	0.8911	0.635	0.52	0.39	0.57	0.81	0.5883	0.82	1	T	0.0	B	0.0	B	.	.	1.000	P	-2.765	N	2.42	T	-0.996	T	0.000	T	0.046	-1.692	0.011	1.39	0.159	0.257	3.985	-1.692074	NA	1	0.527338	0.822808	NA	0.449	NA	6.6669954
985	7	142498833	142498833	A	T	intergenic	PRSS3P2,EPHB6	dist=16434;dist=53959	NA	NA	exonic	ENSG00000211772	NA	unknown	UNKNOWN	Score=472;Name=lod=110	NA	7q34	NA	Name=THAP1_(SC-98174),USF-1,E2F6_(H-50)	Name=7	NA	rs1042956	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.138672	2.138672	0.6	NA	NA	NA	0.152	NA	6.6666667
985	1	16953672	16953672	C	T	ncRNA_exonic	CROCCP2	NA	NA	NA	ncRNA_exonic	ENSG00000215908	NA	NA	NA	Score=450;Name=lod=90	NA	1p36.13	Score=780;Name=V$HTF_01	NA	NA	NA	rs3738597	NA	NA	0.151	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.065	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.136093	NA	NA	NA	NA	NA	0.116	NA	6.6666666
985	2	91845440	91845440	C	T	ncRNA_intronic	LOC654342	NA	NA	NA	ncRNA_intronic	ENSG00000143429	NA	NA	NA	NA	NA	2p11.1	NA	Name=HNF4G_(SC-6558),ELF1_(SC-631),RXRA,CEBPB,p300,TCF12,HNF4A_(H-171),TAF1,FOSL2,HDAC2_(SC-6296),Sin3Ak-20,SP1	Name=77	NA	rs2908255	0.03	0.03	0.026	NA	NA	NA	NA	NA	NA	0.07	0.01	0.02	0.0041	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.232584	NA	NA	NA	NA	NA	0.014	NA	6.6666666
985	3	39175810	39175810	C	T	exonic	TTC21A	NA	synonymous SNV	TTC21A:NM_001105513:exon20:c.C2730T:p.T910T,TTC21A:NM_145755:exon21:c.C2874T:p.T958T	exonic	ENSG00000168026	NA	synonymous SNV	ENSG00000168026:ENST00000440121:exon20:c.C2730T:p.T910T,ENSG00000168026:ENST00000301819:exon21:c.C2877T:p.T959T,ENSG00000168026:ENST00000430597:exon21:c.C2853T:p.T951T,ENSG00000168026:ENST00000431162:exon21:c.C2874T:p.T958T	NA	NA	3p22.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.405211	NA	NA	NA	NA	NA	NA	NA	6.6666666
985	3	168384563	168384563	G	T	ncRNA_intronic	EGFEM1P	NA	NA	NA	ncRNA_exonic	ENSG00000226765	NA	NA	NA	Score=777;Name=lod=1922	NA	3q26.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.083733	NA	NA	NA	NA	NA	NA	NA	6.6666666
985	6	129813620	129813620	C	T	exonic	LAMA2	NA	synonymous SNV	LAMA2:NM_001079823:exon57:c.C8224T:p.L2742L,LAMA2:NM_000426:exon58:c.C8236T:p.L2746L	exonic	ENSG00000196569	NA	synonymous SNV	ENSG00000196569:ENST00000421865:exon58:c.C8236T:p.L2746L	NA	NA	6q22.33	NA	NA	Name=19	NA	rs3189618	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.729104	NA	NA	NA	NA	NA	NA	NA	6.6666666
985	7	76631509	76631509	C	T	ncRNA_exonic	DTX2P1-UPK3BP1-PMS2P11	NA	NA	NA	ncRNA_exonic	ENSG00000186704,ENSG00000265479	NA	NA	NA	NA	NA	7q11.23	NA	Name=ERalpha_a,c-Myc	Name=4	NA	rs7784461	0.36	0.36	0.324	NA	NA	NA	NA	NA	NA	0.39	0.23	0.33	0.51	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.624211	NA	NA	NA	NA	ID=COSM453408;OCCURENCE=1(breast),1(lung)	0.051	NA	6.6666666
985	9	68433522	68433522	G	A	ncRNA_exonic	LOC642236	NA	NA	NA	ncRNA_exonic	ENSG00000215548	NA	NA	NA	Score=603;Name=lod=375	NA	9q13	Score=878;Name=V$OCT1_06	NA	NA	NA	rs75582795	NA	NA	0.191	0.00299521	NA	NA	0.0029	0.0098	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.476339	NA	NA	NA	NA	NA	NA	NA	6.6666666
985	10	17083149	17083149	A	G	exonic	CUBN	NA	synonymous SNV	CUBN:NM_001081:exon27:c.T3900C:p.Y1300Y	exonic	ENSG00000107611	NA	synonymous SNV	ENSG00000107611:ENST00000377833:exon27:c.T3900C:p.Y1300Y	NA	NA	10p13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.425768	NA	NA	NA	NA	NA	NA	NA	6.6666666
985	10	42832258	42832258	C	T	ncRNA_exonic	LOC441666	NA	NA	NA	ncRNA_exonic	ENSG00000215146	NA	NA	NA	Score=374;Name=lod=44	NA	10q11.21	NA	Name=ZNF274	NA	NA	rs73253652	NA	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.304098	NA	NA	NA	NA	NA	0.014	NA	6.6666666
985	13	21951700	21951700	C	T	ncRNA_intronic	MIPEPP3	NA	NA	NA	ncRNA_intronic	ENSG00000236953	NA	NA	NA	Score=265;Name=lod=16	NA	13q12.11	NA	NA	Name=5	NA	rs5027595	NA	NA	0.345	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.482766	NA	NA	NA	NA	NA	NA	NA	6.6666666
985	14	58737788	58737788	C	G	ncRNA_intronic	FLJ31306	NA	NA	NA	ncRNA_intronic	ENSG00000257621	NA	NA	NA	NA	NA	14q23.1	NA	Name=Pol2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.930614	NA	NA	NA	NA	NA	NA	NA	6.6666666
985	15	22546658	22546658	G	A	ncRNA_exonic	REREP3	NA	NA	NA	ncRNA_exonic	ENSG00000259098	NA	NA	NA	Score=780;Name=lod=1971	NA	15q11.2	NA	Name=USF1_(SC-8983)	NA	NA	rs4779392	0.36	0.36	0.307	NA	NA	NA	NA	NA	NA	0.5	0.31	0.43	0.14	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.020702	NA	NA	NA	NA	NA	0.254	NA	6.6666666
985	15	78209526	78209526	T	C	ncRNA_intronic	LOC645752	NA	NA	NA	ncRNA_intronic	ENSG00000260776,ENSG00000261244	NA	NA	NA	Score=401;Name=lod=57	NA	15q24.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.474785	NA	NA	NA	NA	NA	NA	NA	6.6666666
985	19	44536725	44536725	T	C	exonic	ZNF222	NA	synonymous SNV	ZNF222:NM_001129996:exon4:c.T1018C:p.L340L,ZNF222:NM_013360:exon4:c.T898C:p.L300L	exonic	ENSG00000159885	NA	synonymous SNV	ENSG00000159885:ENST00000187879:exon4:c.T898C:p.L300L,ENSG00000159885:ENST00000391960:exon4:c.T1018C:p.L340L	NA	NA	19q13.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.139963	NA	NA	NA	NA	NA	NA	NA	6.6666666
985	20	29637917	29637917	T	A	ncRNA_exonic	MLLT10P1	NA	NA	NA	ncRNA_exonic	ENSG00000238151	NA	NA	NA	NA	NA	20q11.21	NA	Name=BRF2,ZZZ3,IRF3,TAF1,BDP1,BRF1	Name=87	NA	rs74459129	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.162884	NA	NA	NA	NA	NA	NA	NA	6.6666666
985	20	29637960	29637960	G	A	ncRNA_exonic	MLLT10P1	NA	NA	NA	ncRNA_exonic	ENSG00000238151	NA	NA	NA	NA	NA	20q11.21	NA	Name=TAF1,BDP1,BRF1,ZZZ3,BRF2,IRF3	Name=87	NA	rs80038911	NA	NA	0.388	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.871918	NA	NA	NA	NA	NA	NA	NA	6.6666666
985	22	17127446	17127446	G	A	ncRNA_intronic	TPTEP1	NA	NA	NA	ncRNA_exonic	ENSG00000249288	NA	NA	NA	Score=565;Name=lod=264	NA	22q11.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.383247	NA	NA	NA	NA	NA	NA	NA	6.6666666
985	4	8401310	8401310	G	A	exonic	ACOX3	NA	synonymous SNV	ACOX3:NM_001101667:exon8:c.C846T:p.P282P,ACOX3:NM_003501:exon8:c.C846T:p.P282P	exonic	ENSG00000087008	NA	synonymous SNV	ENSG00000087008:ENST00000356406:exon8:c.C846T:p.P282P,ENSG00000087008:ENST00000413009:exon8:c.C846T:p.P282P,ENSG00000087008:ENST00000503233:exon8:c.C846T:p.P282P	NA	NA	4p16.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000008249	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.773892	NA	NA	NA	NA	NA	NA	NA	6.6666584
985	8	105459708	105459708	A	G	exonic	DPYS	NA	synonymous SNV	DPYS:NM_001385:exon3:c.T447C:p.L149L	exonic	ENSG00000147647	NA	synonymous SNV	ENSG00000147647:ENST00000521573:exon2:c.T288C:p.L96L,ENSG00000147647:ENST00000351513:exon3:c.T447C:p.L149L	NA	NA	8q22.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000008239	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.013054	NA	NA	NA	NA	NA	NA	NA	6.6666584
985	2	217280117	217280117	C	T	exonic	SMARCAL1	NA	synonymous SNV	SMARCAL1:NM_001127207:exon3:c.C690T:p.V230V,SMARCAL1:NM_014140:exon3:c.C690T:p.V230V	exonic	ENSG00000138375	NA	synonymous SNV	ENSG00000138375:ENST00000392128:exon1:c.C282T:p.V94V,ENSG00000138375:ENST00000427645:exon1:c.C387T:p.V129V,ENSG00000138375:ENST00000357276:exon3:c.C690T:p.V230V,ENSG00000138375:ENST00000358207:exon3:c.C690T:p.V230V	NA	NA	2q35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00001647	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.163757	NA	NA	NA	NA	NA	NA	NA	6.6666501
985	9	2077644	2077644	C	T	exonic	SMARCA2	NA	synonymous SNV	SMARCA2:NM_003070:exon14:c.C2052T:p.D684D,SMARCA2:NM_139045:exon14:c.C2052T:p.D684D	exonic	ENSG00000080503	NA	synonymous SNV	ENSG00000080503:ENST00000382194:exon13:c.C2052T:p.D684D,ENSG00000080503:ENST00000349721:exon14:c.C2052T:p.D684D,ENSG00000080503:ENST00000357248:exon14:c.C2052T:p.D684D,ENSG00000080503:ENST00000382203:exon14:c.C2052T:p.D684D	Score=547;Name=lod=223	NA	9p24.3	NA	NA	NA	NA	rs149890563	0.0005	0.0005	0	0.000199681	NA	NA	NA	0.0008	NA	NA	NA	NA	0.002	0.00001648	0.002	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.595623	NA	NA	NA	NA	NA	NA	NA	6.6666501
985	3	53326567	53326567	C	T	exonic	DCP1A	NA	synonymous SNV	DCP1A:NM_018403:exon7:c.G915A:p.K305K	exonic	ENSG00000162290	NA	synonymous SNV	ENSG00000162290:ENST00000606822:exon6:c.G801A:p.K267K,ENSG00000162290:ENST00000294241:exon7:c.G915A:p.K305K,ENSG00000162290:ENST00000607628:exon7:c.G915A:p.K305K	Score=295;Name=lod=21	NA	3p21.1	NA	NA	NA	NA	rs200307108	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00001659	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.395762	2.395762	NA	NA	NA	NA	NA	NA	6.66665
985	9	38395910	38395910	G	A	exonic	ALDH1B1	NA	synonymous SNV	ALDH1B1:NM_000692:exon2:c.G165A:p.P55P	exonic	ENSG00000137124	NA	synonymous SNV	ENSG00000137124:ENST00000377698:exon2:c.G165A:p.P55P	NA	NA	9p13.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00002473	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.349347	NA	NA	NA	NA	NA	NA	NA	6.6666419
985	19	35786682	35786682	G	A	exonic	MAG	NA	synonymous SNV	MAG:NM_001199216:exon4:c.G138A:p.P46P,MAG:NM_002361:exon4:c.G213A:p.P71P,MAG:NM_080600:exon4:c.G213A:p.P71P	exonic	ENSG00000105695	NA	synonymous SNV	ENSG00000105695:ENST00000600291:exon3:c.G138A:p.P46P,ENSG00000105695:ENST00000361922:exon4:c.G213A:p.P71P,ENSG00000105695:ENST00000392213:exon4:c.G213A:p.P71P,ENSG00000105695:ENST00000537831:exon4:c.G138A:p.P46P,ENSG00000105695:ENST00000595791:exon4:c.G213A:p.P71P	NA	NA	19q13.12	Score=867;Name=V$SPZ1_01	NA	NA	NA	rs199750254	NA	NA	NA	0.000199681	NA	NA	NA	NA	0.001	NA	NA	NA	NA	0.00002476	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.174811	NA	NA	NA	NA	ID=COSM994929,COSM994928;OCCURENCE=1(large_intestine),1(endometrium)	NA	NA	6.6666418
985	17	8046779	8046779	G	A	exonic	PER1	NA	synonymous SNV	PER1:NM_002616:exon19:c.C2877T:p.P959P	exonic	ENSG00000179094	NA	synonymous SNV	ENSG00000179094:ENST00000581082:exon18:c.C2808T:p.P936P,ENSG00000179094:ENST00000317276:exon19:c.C2877T:p.P959P	NA	NA	17p13.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00003935	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.515826	NA	NA	NA	NA	NA	NA	NA	6.6666273
985	6	2959513	2959513	C	T	exonic	SERPINB6	NA	synonymous SNV	SERPINB6:NM_001271822:exon2:c.G96A:p.T32T,SERPINB6:NM_001271823:exon2:c.G111A:p.T37T,SERPINB6:NM_001271824:exon2:c.G54A:p.T18T,SERPINB6:NM_001271825:exon2:c.G54A:p.T18T,SERPINB6:NM_004568:exon2:c.G54A:p.T18T,SERPINB6:NM_001195291:exon3:c.G66A:p.T22T	exonic	ENSG00000124570	NA	synonymous SNV	ENSG00000124570:ENST00000380520:exon1:c.G54A:p.T18T,ENSG00000124570:ENST00000335686:exon2:c.G54A:p.T18T,ENSG00000124570:ENST00000380524:exon2:c.G54A:p.T18T,ENSG00000124570:ENST00000380529:exon2:c.G54A:p.T18T,ENSG00000124570:ENST00000380539:exon2:c.G54A:p.T18T,ENSG00000124570:ENST00000380546:exon2:c.G54A:p.T18T	NA	NA	6p25.2	NA	NA	NA	NA	rs2236277	0.34	0.34	0.313	0.341254	0.338	0.4841	0.4539	0.1513	0.3742	0.31	0.48	0.45	0.12	0.341	0.48	.	.	.	.	.	.	.	.	0.999	P	.	.	.	.	-1.015	T	0.029	T	.	0.615	7.31	-1.14	-0.034	-0.626	4.027	0.614766	NA	NA	0.321047	0.182705	ID=COSM150035;OCCURENCE=1(stomach)	0.275	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000037111.1;CLNDSDB=.;CLNDSDBID=.	6.6666196
985	22	19967453	19967453	C	T	exonic	ARVCF	NA	synonymous SNV	ARVCF:NM_001670:exon6:c.G1209A:p.P403P	exonic	ENSG00000099889	NA	synonymous SNV	ENSG00000099889:ENST00000344269:exon4:c.G1020A:p.P340P,ENSG00000099889:ENST00000401994:exon4:c.G1020A:p.P340P,ENSG00000099889:ENST00000406259:exon4:c.G1209A:p.P403P,ENSG00000099889:ENST00000406522:exon4:c.G1020A:p.P340P,ENSG00000099889:ENST00000263207:exon6:c.G1209A:p.P403P	NA	NA	22q11.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00006909	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.390619	NA	NA	NA	NA	NA	NA	NA	6.6665975
985	9	74300191	74300191	G	A	exonic	TMEM2	NA	synonymous SNV	TMEM2:NM_001135820:exon23:c.C3885T:p.D1295D,TMEM2:NM_013390:exon24:c.C4074T:p.D1358D	exonic	ENSG00000135048	NA	synonymous SNV	ENSG00000135048:ENST00000396272:exon7:c.C1053T:p.D351D,ENSG00000135048:ENST00000377066:exon23:c.C3885T:p.D1295D,ENSG00000135048:ENST00000377044:exon24:c.C4074T:p.D1358D	NA	NA	9q21.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00007417	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.162327	NA	NA	NA	NA	NA	NA	NA	6.6665924
985	21	43531675	43531675	C	T	exonic	UMODL1	NA	synonymous SNV	UMODL1:NM_001199527:exon11:c.C2127T:p.T709T,UMODL1:NM_173568:exon11:c.C2343T:p.T781T,UMODL1:NM_001004416:exon12:c.C1959T:p.T653T,UMODL1:NM_001199528:exon12:c.C1743T:p.T581T	exonic	ENSG00000177398	NA	synonymous SNV	ENSG00000177398:ENST00000400427:exon11:c.C2127T:p.T709T,ENSG00000177398:ENST00000408989:exon11:c.C2343T:p.T781T,ENSG00000177398:ENST00000400424:exon12:c.C1743T:p.T581T,ENSG00000177398:ENST00000408910:exon12:c.C1959T:p.T653T	NA	NA	21q22.3	NA	Name=EBF	NA	NA	rs201648916	0.0005	0.0005	NA	0.000399361	NA	NA	NA	0.0015	NA	NA	NA	NA	0.002	0.0001	0.002	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.005235	NA	NA	NA	NA	NA	NA	NA	6.6665666
985	1	28599160	28599160	C	T	exonic	SESN2	NA	synonymous SNV	SESN2:NM_031459:exon5:c.C606T:p.T202T	exonic	ENSG00000130766	NA	synonymous SNV	ENSG00000130766:ENST00000253063:exon5:c.C606T:p.T202T	Score=496;Name=lod=138	NA	1p35.3	NA	NA	NA	NA	rs147643685	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00003296	0.0002	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.240248	1.240248	NA	0.000116	0.000227	NA	NA	NA	6.6665176
985	8	75929142	75929142	T	C	exonic	CRISPLD1	NA	synonymous SNV	CRISPLD1:NM_031461:exon8:c.T895C:p.L299L	exonic	ENSG00000121005	NA	synonymous SNV	ENSG00000121005:ENST00000517786:exon6:c.T337C:p.L113L,ENSG00000121005:ENST00000523524:exon7:c.T331C:p.L111L,ENSG00000121005:ENST00000262207:exon8:c.T895C:p.L299L	Score=560;Name=lod=251	NA	8q21.11	NA	NA	NA	NA	rs200626463	0.0005	0.0005	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0028	NA	0.0002	0.0028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.411363	NA	NA	0.000118	0	NA	NA	NA	6.6663486
985	15	80464532	80464532	C	A	exonic	FAH	NA	synonymous SNV	FAH:NM_000137:exon8:c.C648A:p.I216I	exonic	ENSG00000103876	NA	synonymous SNV	ENSG00000103876:ENST00000539156:exon7:c.C438A:p.I146I,ENSG00000103876:ENST00000561421:exon8:c.C648A:p.I216I,ENSG00000103876:ENST00000261755:exon9:c.C648A:p.I216I,ENSG00000103876:ENST00000407106:exon9:c.C648A:p.I216I	Score=440;Name=lod=82	NA	15q25.1	NA	NA	NA	NA	rs147016995	0.0014	0.0014	0.003	0.000399361	NA	NA	NA	0.0015	NA	NA	NA	NA	0.01	0.00009063	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.224893	NA	NA	0.000233	0	NA	0.007	NA	6.666343
985	12	7361754	7361754	C	T	exonic	PEX5	NA	synonymous SNV	PEX5:NM_000319:exon13:c.C1524T:p.S508S,PEX5:NM_001131024:exon13:c.C1437T:p.S479S,PEX5:NM_001131023:exon14:c.C1593T:p.S531S,PEX5:NM_001131025:exon14:c.C1548T:p.S516S,PEX5:NM_001131026:exon15:c.C1548T:p.S516S	exonic	ENSG00000139197	NA	synonymous SNV	ENSG00000139197:ENST00000266563:exon13:c.C1437T:p.S479S,ENSG00000139197:ENST00000266564:exon13:c.C1524T:p.S508S,ENSG00000139197:ENST00000412720:exon14:c.C1611T:p.S537S,ENSG00000139197:ENST00000420616:exon14:c.C1548T:p.S516S,ENSG00000139197:ENST00000434354:exon14:c.C1593T:p.S531S,ENSG00000139197:ENST00000455147:exon15:c.C1548T:p.S516S	Score=533;Name=lod=195	NA	12p13.31	NA	NA	NA	NA	rs143571888	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0003	0.0005	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.934377	NA	NA	0.000233	0.000454	NA	NA	NA	6.6661336
985	20	30433352	30433352	C	T	UTR5	FOXS1	NM_004118:c.-7G>A	NA	NA	UTR5	ENSG00000179772	ENST00000375978:c.-7G>A	NA	NA	Score=389;Name=lod=51	NA	20q11.21	NA	Name=Pol2	Name=37	NA	rs6121246	0.23	0.23	0.254	0.221246	0.2485	NA	0.1599	0.5257	0.0532	0.25	NA	0.17	0.53	0.2057	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.557165	NA	NA	0.21319	0.439254	NA	0.167	NA	6.6659434
985	1	6659505	6659505	G	A	exonic	KLHL21	NA	synonymous SNV	KLHL21:NM_014851:exon2:c.C1029T:p.S343S	exonic	ENSG00000162413	NA	synonymous SNV	ENSG00000162413:ENST00000377658:exon2:c.C1029T:p.S343S,ENSG00000162413:ENST00000377663:exon2:c.C1029T:p.S343S	NA	NA	1p36.31	NA	Name=CTCF,Egr-1	Name=71	NA	rs2232460	0.31	0.31	0.316	0.347444	0.3171	0.38	0.3127	0.267	0.4785	0.32	0.37	0.29	0.24	0.3456	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.436702	2.436702	NA	0.33814	0.269178	ID=COSM426608;OCCURENCE=1(breast)	0.391	NA	6.6658266
985	15	78209350	78209350	C	G	ncRNA_intronic	LOC645752	NA	NA	NA	ncRNA_intronic	ENSG00000260776,ENSG00000261244	NA	NA	NA	NA	NA	15q24.3	Score=955;Name=V$ZIC1_01	NA	NA	NA	NA	NA	NA	NA	0.00159744	NA	NA	NA	NA	0.0082	NA	NA	NA	NA	0.001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.409511	NA	NA	NA	NA	NA	NA	NA	6.6656666
985	17	56688605	56688605	G	A	exonic	TEX14	NA	synonymous SNV	TEX14:NM_001201457:exon10:c.C1119T:p.I373I,TEX14:NM_031272:exon10:c.C1101T:p.I367I,TEX14:NM_198393:exon10:c.C1101T:p.I367I	exonic	ENSG00000121101	NA	synonymous SNV	ENSG00000121101:ENST00000240361:exon10:c.C1119T:p.I373I,ENSG00000121101:ENST00000349033:exon10:c.C1101T:p.I367I,ENSG00000121101:ENST00000389934:exon10:c.C1101T:p.I367I	Score=451;Name=lod=91	NA	17q22	NA	NA	NA	NA	rs192936672	0.0005	0.0005	NA	0.000199681	0.001	NA	NA	NA	NA	0.0013	NA	NA	NA	0.0002	0.0013	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.117293	NA	NA	NA	NA	NA	NA	NA	6.6654666
985	1	55224346	55224346	C	T	exonic	PARS2	NA	synonymous SNV	PARS2:NM_152268:exon2:c.G489A:p.T163T	exonic	ENSG00000162396	NA	synonymous SNV	ENSG00000162396:ENST00000371279:exon2:c.G489A:p.T163T	NA	NA	1p32.3	Score=761;Name=V$TCF11MAFG_01	NA	NA	NA	rs145967472	0.0014	0.0014	NA	0.00119808	NA	NA	NA	0.0045	NA	NA	NA	NA	0.01	0.0009	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.40927	NA	NA	0.000349	0.01044	NA	NA	NA	6.6654176
985	19	52825796	52825796	A	G	exonic	ZNF480	NA	synonymous SNV	ZNF480:NM_144684:exon5:c.A1293G:p.E431E	exonic	ENSG00000198464	NA	synonymous SNV	ENSG00000198464:ENST00000335090:exon3:c.A1062G:p.E354E,ENSG00000198464:ENST00000334564:exon4:c.A1164G:p.E388E,ENSG00000198464:ENST00000468240:exon5:c.A1293G:p.E431E,ENSG00000198464:ENST00000595962:exon5:c.A1293G:p.E431E	NA	NA	19q13.41	NA	Name=SETDB1	NA	NA	rs150701576	0.0018	0.0018	0.002	0.00259585	NA	NA	NA	0.0098	NA	NA	NA	NA	0.01	0.0008	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.378952	NA	NA	0.000465	0.00522	NA	NA	NA	6.6654016
985	1	109805587	109805587	G	T	exonic	CELSR2	NA	synonymous SNV	CELSR2:NM_001408:exon7:c.G4704T:p.V1568V	exonic	ENSG00000143126	NA	synonymous SNV	ENSG00000143126:ENST00000271332:exon7:c.G4704T:p.V1568V	Score=395;Name=lod=54	NA	1p13.3	NA	NA	NA	NA	rs200841982	NA	NA	NA	0.000199681	0.001	NA	NA	NA	NA	NA	NA	NA	NA	0.0002	0.0001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.774455	NA	NA	0.000116	0	NA	NA	NA	6.6653506
985	13	33273973	33273973	A	C	exonic	PDS5B	NA	synonymous SNV	PDS5B:NM_015032:exon16:c.A1707C:p.P569P	exonic	ENSG00000083642	NA	synonymous SNV	ENSG00000083642:ENST00000315596:exon16:c.A1707C:p.P569P,ENSG00000083642:ENST00000450460:exon16:c.A1707C:p.P569P	Score=701;Name=lod=941	NA	13q13.1	NA	NA	NA	NA	rs371816913	NA	NA	NA	0.000199681	0.001	NA	NA	NA	NA	NA	NA	NA	NA	0.0003	0.0001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.263981	1.263981	NA	0.000123	0	NA	NA	NA	6.6652436
985	3	46593058	46593058	G	A	exonic	LRRC2	NA	synonymous SNV	LRRC2:NM_024512:exon2:c.C24T:p.F8F	exonic	ENSG00000163827	NA	synonymous SNV	ENSG00000163827:ENST00000296144:exon2:c.C24T:p.F8F,ENSG00000163827:ENST00000395905:exon2:c.C24T:p.F8F	Score=428;Name=lod=73	NA	3p21.31	NA	NA	NA	NA	rs146344015	NA	NA	NA	0.000599042	0.001	NA	NA	NA	0.002	NA	NA	NA	NA	0.0002	0.0003	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.099416	NA	NA	0.000349	0.000227	NA	NA	NA	6.6651176
985	10	87373299	87373299	G	A	exonic	GRID1	NA	synonymous SNV	GRID1:NM_017551:exon15:c.C2466T:p.D822D	exonic	ENSG00000182771	NA	synonymous SNV	ENSG00000182771:ENST00000536331:exon8:c.C1179T:p.D393D,ENSG00000182771:ENST00000327946:exon15:c.C2466T:p.D822D	Score=516;Name=lod=166	NA	10q23.1	NA	NA	NA	NA	rs150033140	NA	NA	NA	0.000199681	0.001	NA	NA	NA	NA	NA	NA	NA	NA	0.0002	0.0003	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.053053	NA	NA	0.000349	0	NA	NA	NA	6.6651176
986	19	41269551	41269551	C	T	exonic	SNRPA	NA	synonymous SNV	SNRPA:NM_004596:exon5:c.C660T:p.N220N	exonic	ENSG00000077312	NA	synonymous SNV	ENSG00000077312:ENST00000243563:exon5:c.C660T:p.N220N,ENSG00000077312:ENST00000601393:exon5:c.C597T:p.N199N,ENSG00000077312:ENST00000601545:exon5:c.C510T:p.N170N	Score=591;Name=lod=337	NA	19q13.2	NA	NA	NA	NA	rs116493527	0.01	0.01	0.009	0.00519169	NA	0.003	0.0058	0.0144	NA	NA	0.0035	0.01	0.02	0.0017	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.166233	NA	NA	0.000116	0.011348	NA	NA	NA	6.6648506
986	11	62621309	62621309	G	A	ncRNA_intronic	SNHG1	NA	NA	NA	ncRNA_exonic	ENSG00000255717	NA	NA	NA	NA	NA	11q12.3	NA	Name=BCLAF1_(M33-P5B11),TAF7_(SQ-8),Pol2,Pol2-4H8	Name=6	NA	rs560006	0.03	0.03	0.027	0.0229633	0.002	NA	0.0101	0.0802	NA	0.01	NA	0.01	0.1	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.239041	NA	NA	NA	NA	NA	0.029	NA	6.6646666
986	19	33703254	33703254	G	A	exonic	SLC7A10	NA	synonymous SNV	SLC7A10:NM_019849:exon5:c.C732T:p.A244A	exonic	ENSG00000130876	NA	synonymous SNV	ENSG00000130876:ENST00000253188:exon5:c.C732T:p.A244A,ENSG00000130876:ENST00000590036:exon5:c.C732T:p.A244A	Score=618;Name=lod=434	NA	19q13.11	NA	NA	NA	NA	rs115581846	0.01	0.01	0.007	0.00658946	NA	NA	0.0014	0.0242	NA	NA	NA	0.0028	0.02	0.0021	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.511205	1.511205	NA	0.000349	0.0202	NA	0.014	NA	6.6642176
986	1	205764031	205764031	G	A	exonic	SLC41A1	NA	synonymous SNV	SLC41A1:NM_173854:exon10:c.C1323T:p.F441F	exonic	ENSG00000133065	NA	synonymous SNV	ENSG00000133065:ENST00000367137:exon10:c.C1323T:p.F441F	Score=579;Name=lod=301	NA	1q32.1	NA	NA	NA	NA	rs151305052	NA	NA	NA	0.000399361	NA	NA	NA	NA	0.002	NA	NA	NA	NA	0.0013	0.0012	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.369635	1.369635	NA	0.001163	0.000454	NA	NA	NA	6.6642036
986	10	76979070	76979070	A	G	exonic	VDAC2	NA	synonymous SNV	VDAC2:NM_001184823:exon6:c.A312G:p.Q104Q,VDAC2:NM_003375:exon6:c.A312G:p.Q104Q,VDAC2:NM_001184783:exon7:c.A357G:p.Q119Q	exonic	ENSG00000165637	NA	synonymous SNV	ENSG00000165637:ENST00000447677:exon5:c.A312G:p.Q104Q,ENSG00000165637:ENST00000298468:exon6:c.A312G:p.Q104Q,ENSG00000165637:ENST00000332211:exon6:c.A312G:p.Q104Q,ENSG00000165637:ENST00000344036:exon6:c.A312G:p.Q104Q,ENSG00000165637:ENST00000543351:exon6:c.A312G:p.Q104Q,ENSG00000165637:ENST00000313132:exon7:c.A357G:p.Q119Q,ENSG00000165637:ENST00000535553:exon7:c.A195G:p.Q65Q	Score=615;Name=lod=422	NA	10q22.2	NA	NA	NA	NA	rs144704103	0.0005	0.0005	NA	0.000199681	0.001	NA	NA	NA	NA	0.0013	NA	NA	NA	0.0009	0.0013	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.805591	NA	NA	0.000698	0	NA	NA	NA	6.6640686
986	21	45746685	45746685	C	T	exonic	PFKL	NA	synonymous SNV	PFKL:NM_002626:exon22:c.C2283T:p.Y761Y	exonic	ENSG00000141959	NA	synonymous SNV	ENSG00000141959:ENST00000349048:exon22:c.C2283T:p.Y761Y,ENSG00000141959:ENST00000403390:exon23:c.C2424T:p.Y808Y	Score=604;Name=lod=380	NA	21q22.3	NA	NA	NA	NA	rs146583875	0.0009	0.0009	NA	0.000798722	0.002	NA	0.0029	NA	NA	0.0013	NA	0.0028	NA	0.0009	0.0028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.107598	NA	NA	0.000349	0.000682	NA	NA	NA	6.6634176
986	10	82269185	82269185	C	T	exonic	TSPAN14	NA	synonymous SNV	TSPAN14:NM_030927:exon5:c.C408T:p.D136D	exonic	ENSG00000108219	NA	synonymous SNV	ENSG00000108219:ENST00000372164:exon4:c.C357T:p.D119D,ENSG00000108219:ENST00000372157:exon5:c.C318T:p.D106D,ENSG00000108219:ENST00000429989:exon5:c.C408T:p.D136D,ENSG00000108219:ENST00000372158:exon7:c.C408T:p.D136D,ENSG00000108219:ENST00000372156:exon8:c.C408T:p.D136D	Score=548;Name=lod=224	NA	10q23.1	NA	NA	NA	NA	rs116583360	0.0032	0.0032	0.004	0.00459265	0.001	NA	0.0043	0.0136	0.001	0.0013	NA	0.0028	0.01	0.0019	0.012	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.414124	1.414124	NA	0.000581	0.011802	ID=COSM197151;OCCURENCE=1(pancreas),1(large_intestine)	0.007	NA	6.6631856
986	18	47511137	47511137	C	A	exonic	MYO5B	NA	synonymous SNV	MYO5B:NM_001080467:exon8:c.G897T:p.V299V	exonic	ENSG00000167306	NA	synonymous SNV	ENSG00000167306:ENST00000285039:exon8:c.G897T:p.V299V	Score=463;Name=lod=102	NA	18q21.1	NA	NA	NA	NA	rs7240377	0.01	0.01	0.006	0.0111821	NA	NA	0.0029	0.0408	NA	NA	NA	0.0028	0.05	0.0034	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.355701	1.355701	NA	0.00012	0.036106	NA	0.029	NA	6.6631466
986	3	9055435	9055435	G	A	exonic	SRGAP3	NA	synonymous SNV	SRGAP3:NM_001033117:exon16:c.C1833T:p.F611F,SRGAP3:NM_014850:exon16:c.C1905T:p.F635F	exonic	ENSG00000196220	NA	synonymous SNV	ENSG00000196220:ENST00000360413:exon16:c.C1833T:p.F611F,ENSG00000196220:ENST00000383836:exon16:c.C1905T:p.F635F	Score=618;Name=lod=432	NA	3p25.3	NA	NA	NA	NA	rs145531861	NA	NA	NA	0.000199681	NA	NA	NA	0.0008	NA	NA	NA	NA	NA	0.0014	0.0023	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.003317	NA	NA	0.002326	0.000227	NA	NA	NA	6.6629406
986	22	21383661	21383661	G	A	exonic	SLC7A4	NA	synonymous SNV	SLC7A4:NM_004173:exon4:c.C1696T:p.L566L	exonic	ENSG00000099960	NA	synonymous SNV	ENSG00000099960:ENST00000382932:exon4:c.C1696T:p.L566L,ENSG00000099960:ENST00000403586:exon4:c.C1696T:p.L566L	Score=590;Name=lod=332	NA	22q11.21	NA	NA	NA	NA	rs45618435	0.0009	0.0009	NA	0.000998403	0.001	NA	0.0058	NA	NA	0.0013	NA	0.0028	NA	0.0013	0.0028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.043046	NA	NA	0.001628	0.000908	NA	NA	NA	6.6627386
986	19	10084471	10084471	C	A	exonic	COL5A3	NA	synonymous SNV	COL5A3:NM_015719:exon49:c.G3573T:p.L1191L	exonic	ENSG00000080573	NA	synonymous SNV	ENSG00000080573:ENST00000264828:exon49:c.G3573T:p.L1191L	Score=378;Name=lod=46	NA	19p13.2	NA	NA	NA	NA	rs62638751	0.01	0.01	0.009	0.0151757	NA	NA	0.0043	0.0552	NA	NA	NA	NA	0.04	0.0041	0.041	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.666947	NA	NA	0	0.041307	NA	0.007	NA	6.6625666
986	2	219887947	219887947	G	T	exonic	CCDC108	NA	synonymous SNV	CCDC108:NM_194302:exon16:c.C2802A:p.I934I	exonic	ENSG00000181378	NA	synonymous SNV	ENSG00000181378:ENST00000453220:exon14:c.C2802A:p.I934I,ENSG00000181378:ENST00000441968:exon15:c.C2802A:p.I934I,ENSG00000181378:ENST00000341552:exon16:c.C2802A:p.I934I	Score=385;Name=lod=49	NA	2q35	NA	NA	NA	NA	rs146417352	NA	NA	NA	0.00199681	0.001	0.001	NA	NA	0.0082	NA	NA	NA	NA	0.0022	0.0009	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.881703	NA	NA	0.00093	0.000227	NA	NA	NA	6.6625366
986	10	62038547	62038547	G	A	exonic	ANK3	NA	synonymous SNV	ANK3:NM_001204404:exon4:c.C348T:p.V116V,ANK3:NM_020987:exon4:c.C399T:p.V133V,ANK3:NM_001204403:exon5:c.C381T:p.V127V	exonic	ENSG00000151150	NA	synonymous SNV	ENSG00000151150:ENST00000280772:exon4:c.C399T:p.V133V,ENSG00000151150:ENST00000503366:exon4:c.C348T:p.V116V,ENSG00000151150:ENST00000503925:exon4:c.C321T:p.V107V,ENSG00000151150:ENST00000373827:exon5:c.C381T:p.V127V	Score=604;Name=lod=381	NA	10q21.2	NA	NA	NA	NA	rs77316697	0.0009	0.0009	0.001	0.000399361	0.002	NA	NA	NA	NA	0.0026	NA	NA	NA	0.0006	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.37764	1.37764	NA	0.00186	0.000454	NA	0.007	NA	6.6622066
986	7	142495156	142495156	T	G	intergenic	PRSS3P2,EPHB6	dist=12757;dist=57636	NA	NA	exonic	ENSG00000211771	NA	nonsynonymous SNV	ENSG00000211771:ENST00000390419:exon1:c.T17G:p.L6R	NA	NA	7q34	NA	Name=SUZ12,Pol2	Name=12	NA	rs17163733	0.07	0.07	0.041	0.0780751	0.0666	0.0397	0.0576	0.1634	0.0286	0.06	0.03	0.06	0.15	0.0605	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.297936	1.297936	0	0.044292	0.13886	NA	0.029	NA	6.6619414
986	19	10129555	10129555	C	T	exonic	RDH8	NA	synonymous SNV	RDH8:NM_015725:exon3:c.C471T:p.I157I	exonic	ENSG00000080511	NA	synonymous SNV	ENSG00000080511:ENST00000171214:exon3:c.C411T:p.I137I,ENSG00000080511:ENST00000591589:exon3:c.C471T:p.I157I	Score=519;Name=lod=171	NA	19p13.2	NA	NA	NA	NA	rs2233795	0.01	0.01	0.017	0.0165735	NA	NA	0.0086	0.0582	NA	NA	NA	NA	0.07	0.0048	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.116649	NA	NA	0	0.051294	NA	0.014	NA	6.6618666
986	7	20689734	20689734	G	A	exonic	ABCB5	NA	synonymous SNV	ABCB5:NM_001163941:exon12:c.G1296A:p.Q432Q	exonic	ENSG00000004846	NA	synonymous SNV	ENSG00000004846:ENST00000404938:exon12:c.G1296A:p.Q432Q	Score=500;Name=lod=143	NA	7p21.1	NA	NA	NA	NA	rs139633934	0.0014	0.0014	0.002	0.00139776	0.002	NA	0.0058	0.0008	NA	0.0026	NA	0.0028	NA	0.0011	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.903532	NA	NA	0.001815	0	NA	0.007	NA	6.6617516
986	16	57206205	57206205	C	T	exonic	FAM192A	NA	synonymous SNV	FAM192A:NM_024946:exon4:c.G306A:p.K102K	exonic	ENSG00000172775	NA	synonymous SNV	ENSG00000172775:ENST00000389447:exon3:c.G306A:p.K102K,ENSG00000172775:ENST00000309137:exon4:c.G306A:p.K102K,ENSG00000172775:ENST00000562324:exon4:c.G306A:p.K102K,ENSG00000172775:ENST00000562406:exon4:c.G306A:p.K102K,ENSG00000172775:ENST00000566077:exon4:c.G75A:p.K25K,ENSG00000172775:ENST00000567439:exon4:c.G306A:p.K102K,ENSG00000172775:ENST00000568671:exon4:c.G306A:p.K102K,ENSG00000172775:ENST00000569266:exon4:c.G306A:p.K102K,ENSG00000172775:ENST00000564108:exon5:c.G306A:p.K102K,ENSG00000172775:ENST00000565458:exon5:c.G306A:p.K102K,ENSG00000172775:ENST00000566584:exon5:c.G306A:p.K102K,ENSG00000172775:ENST00000567044:exon5:c.G306A:p.K102K	Score=685;Name=lod=811	NA	16q13	NA	NA	NA	NA	rs180702754	0.0009	0.0009	NA	0.000798722	0.001	NA	0.0014	NA	0.002	0.0013	NA	0.0028	NA	0.0017	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.018266	NA	NA	0.002322	0	NA	0.007	NA	6.6616446
986	3	121260205	121260205	G	A	exonic	POLQ	NA	synonymous SNV	POLQ:NM_199420:exon3:c.C465T:p.Y155Y	exonic	ENSG00000051341	NA	synonymous SNV	ENSG00000051341:ENST00000264233:exon3:c.C465T:p.Y155Y	Score=652;Name=lod=595	NA	3q13.33	NA	NA	NA	NA	rs142289848	0.0018	0.0018	NA	0.00119808	0.003	NA	0.0043	NA	NA	0.0026	NA	0.01	NA	0.0007	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.81806	NA	NA	0.001395	0.000681	NA	NA	NA	6.6615716
986	12	6421495	6421495	G	A	exonic	PLEKHG6	NA	nonsynonymous SNV	PLEKHG6:NM_001144856:exon2:c.G103A:p.A35T,PLEKHG6:NM_018173:exon2:c.G103A:p.A35T	exonic	ENSG00000008323	NA	nonsynonymous SNV	ENSG00000008323:ENST00000011684:exon2:c.G103A:p.A35T,ENSG00000008323:ENST00000396988:exon2:c.G103A:p.A35T,ENSG00000008323:ENST00000536531:exon2:c.G103A:p.A35T	NA	NA	12p13.31	NA	NA	NA	NA	rs740842	0.49	0.49	0.522	0.459265	0.5805	0.2688	0.3948	0.5991	0.3875	0.59	0.28	0.44	0.62	0.5187	0.62	0.19	T	0.099	B	0.04	B	0.634	N	1.000	P	1.78	L	0.79	T	-0.926	T	0.000	T	0.027	2.029	12.74	-4.25	-0.922	-0.155	7.443	2.028752	2.028752	0.01	0.572674	0.600545	NA	0.471	NA	6.6614594
986	11	58602309	58602309	C	T	exonic	GLYATL2	NA	nonsynonymous SNV	GLYATL2:NM_145016:exon6:c.G478A:p.E160K	exonic	ENSG00000156689	NA	nonsynonymous SNV	ENSG00000156689:ENST00000287275:exon6:c.G478A:p.E160K,ENSG00000156689:ENST00000532258:exon7:c.G478A:p.E160K	NA	NA	11q12.1	NA	NA	NA	NA	rs11229651	0.3	0.3	0.266	0.333466	0.2018	0.4841	0.3242	0.2852	0.3855	0.23	0.46	0.27	0.27	0.2825	0.46	1	T	0.0	B	0.0	B	0.532	N	0.000	P	-0.755	N	2.54	T	-0.930	T	0.000	T	0.02	-1.225	0.061	-1.35	0.057	0.205	5.654	-1.225198	NA	0.86	0.187605	0.258182	ID=COSM147251;OCCURENCE=1(stomach)	0.261	NA	6.6614284
986	2	172926350	172926350	G	A	exonic	METAP1D	NA	synonymous SNV	METAP1D:NM_199227:exon2:c.G165A:p.P55P	exonic	ENSG00000172878	NA	synonymous SNV	ENSG00000172878:ENST00000315796:exon2:c.G165A:p.P55P	Score=525;Name=lod=182	NA	2q31.1	NA	NA	NA	NA	rs149714087	0.0005	0.0005	NA	0.000798722	0.001	NA	NA	0.0023	NA	0.0013	NA	NA	NA	0.0015	0.0028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.12063	NA	NA	0.002791	0.001135	NA	NA	NA	6.6613756
986	6	85472129	85472129	C	T	intronic	TBX18	NA	NA	NA	intronic	ENSG00000112837	NA	NA	NA	NA	NA	6q14.3	Score=781;Name=V$PPARG_03	Name=Pol2	Name=10	NA	rs1883873	0.18	0.18	0.183	0.190895	0.339	0.0962	0.1916	0.0545	0.32	0.34	0.07	0.21	0.05	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.893884	1.893884	NA	NA	NA	NA	0.268	NA	6.661
986	20	37570725	37570725	C	T	exonic	FAM83D	NA	synonymous SNV	FAM83D:NM_030919:exon2:c.C697T:p.L233L	exonic	ENSG00000101447	NA	synonymous SNV	ENSG00000101447:ENST00000217429:exon2:c.C697T:p.L233L	Score=546;Name=lod=220	NA	20q11.23	NA	Name=CTCF,FOXA1_(SC-101058),MafK_(SC-477)	NA	NA	rs3752293	0.41	0.41	0.423	0.408946	0.3419	0.4365	0.3847	0.5492	0.2771	0.35	0.37	0.38	0.58	0.3424	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.392123	NA	NA	0.321627	0.506778	NA	0.355	NA	6.6607396
986	9	137803106	137803106	G	A	exonic	FCN1	NA	synonymous SNV	FCN1:NM_002003:exon8:c.C606T:p.S202S	exonic	ENSG00000085265	NA	synonymous SNV	ENSG00000085265:ENST00000371806:exon8:c.C606T:p.S202S	NA	NA	9q34.3	Score=732;Name=V$SEF1_C	NA	NA	NA	rs142943184	0.0009	0.0009	0.001	0.000599042	0.003	NA	NA	NA	NA	0.0026	NA	NA	NA	0.0018	0.0026	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.394818	NA	NA	0.001628	0	NA	NA	NA	6.6602386
986	4	95198229	95198229	C	G	exonic	SMARCAD1	NA	synonymous SNV	SMARCAD1:NM_001254949:exon8:c.C711G:p.L237L,SMARCAD1:NM_001128429:exon16:c.C2001G:p.L667L,SMARCAD1:NM_001128430:exon16:c.C2001G:p.L667L,SMARCAD1:NM_020159:exon16:c.C2001G:p.L667L	exonic	ENSG00000163104	NA	synonymous SNV	ENSG00000163104:ENST00000509418:exon8:c.C711G:p.L237L,ENSG00000163104:ENST00000354268:exon16:c.C2001G:p.L667L,ENSG00000163104:ENST00000359052:exon16:c.C2001G:p.L667L,ENSG00000163104:ENST00000457823:exon16:c.C2001G:p.L667L	Score=681;Name=lod=779	NA	4q22.3	NA	NA	NA	NA	rs61762662	0.0005	0.0005	NA	0.000599042	0.003	NA	NA	NA	NA	0.0013	NA	NA	NA	0.002	0.0015	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.090326	NA	NA	0.001512	0.000454	NA	NA	NA	6.6601546
986	6	88854082	88854082	G	A	exonic	CNR1	NA	synonymous SNV	CNR1:NM_001160259:exon2:c.C912T:p.H304H,CNR1:NM_016083:exon2:c.C912T:p.H304H,CNR1:NM_033181:exon2:c.C813T:p.H271H,CNR1:NM_001160226:exon3:c.C912T:p.H304H,CNR1:NM_001160258:exon4:c.C912T:p.H304H	exonic	ENSG00000118432	NA	synonymous SNV	ENSG00000118432:ENST00000549890:exon1:c.C912T:p.H304H,ENSG00000118432:ENST00000369499:exon2:c.C912T:p.H304H,ENSG00000118432:ENST00000369501:exon2:c.C912T:p.H304H,ENSG00000118432:ENST00000428600:exon2:c.C912T:p.H304H,ENSG00000118432:ENST00000468898:exon2:c.C813T:p.H271H,ENSG00000118432:ENST00000535130:exon2:c.C912T:p.H304H,ENSG00000118432:ENST00000537554:exon2:c.C912T:p.H304H,ENSG00000118432:ENST00000549716:exon2:c.C729T:p.H243H	Score=435;Name=lod=78	NA	6q15	NA	NA	NA	NA	rs144233963	0.0046	0.0046	0.006	0.0071885	0.002	NA	0.0043	0.0234	NA	0.0013	NA	0.0028	0.02	0.0033	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.574087	NA	NA	0.001395	0.019973	NA	NA	NA	6.6599716
986	11	102987322	102987322	A	G	exonic	DYNC2H1	NA	synonymous SNV	DYNC2H1:NM_001080463:exon5:c.A645G:p.L215L,DYNC2H1:NM_001377:exon5:c.A645G:p.L215L	exonic	ENSG00000187240	NA	synonymous SNV	ENSG00000187240:ENST00000334267:exon5:c.A645G:p.L215L,ENSG00000187240:ENST00000375735:exon5:c.A645G:p.L215L,ENSG00000187240:ENST00000398093:exon5:c.A645G:p.L215L	NA	NA	11q22.3	Score=878;Name=V$GRE_C	NA	NA	NA	rs116666272	0.01	0.01	0.017	0.0175719	0.002	NA	0.0072	0.0613	NA	NA	NA	0.01	0.06	0.0048	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.829745	NA	NA	0.000244	0.048649	NA	0.022	NA	6.6596226
986	16	2027195	2027195	C	T	exonic	TBL3	NA	synonymous SNV	TBL3:NM_006453:exon15:c.C1581T:p.V527V	exonic	ENSG00000183751	NA	synonymous SNV	ENSG00000183751:ENST00000568546:exon15:c.C1581T:p.V527V	Score=455;Name=lod=94	NA	16p13.3	NA	NA	NA	NA	rs148169075	0.0027	0.0027	0.001	0.00139776	0.003	NA	0.0058	NA	NA	0.004	NA	0.01	NA	0.0016	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.224139	NA	NA	0.002559	0.000455	NA	NA	NA	6.6595076
986	1	204197978	204197978	T	C	exonic	PLEKHA6	NA	synonymous SNV	PLEKHA6:NM_014935:exon20:c.A2763G:p.P921P	exonic	ENSG00000143850	NA	synonymous SNV	ENSG00000143850:ENST00000272203:exon20:c.A2763G:p.P921P,ENSG00000143850:ENST00000414478:exon20:c.A2823G:p.P941P	Score=467;Name=lod=105	NA	1q32.1	NA	NA	NA	NA	rs142113537	0.0005	0.0005	NA	0.000599042	0.002	NA	0.0014	NA	NA	0.0013	NA	NA	NA	0.0018	0.0035	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.063056	NA	NA	0.003488	0.000681	NA	NA	NA	6.6593786
986	6	38690855	38690855	G	C	exonic	DNAH8	NA	synonymous SNV	DNAH8:NM_001206927:exon2:c.G270C:p.P90P	exonic	ENSG00000124721	NA	synonymous SNV	ENSG00000124721:ENST00000327475:exon1:c.G234C:p.P78P,ENSG00000124721:ENST00000373278:exon2:c.G270C:p.P90P,ENSG00000124721:ENST00000449981:exon2:c.G270C:p.P90P	NA	NA	6p21.2	NA	Name=Pol2-4H8,Pol2(b)	NA	NA	rs180723141	0.0018	0.0018	NA	0.00139776	0.003	NA	0.0043	NA	0.001	0.0026	NA	0.01	NA	0.0026	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.669405	NA	NA	0.002762	0.000571	NA	NA	NA	6.6583046
986	11	45986980	45986980	G	A	exonic	PHF21A	NA	synonymous SNV	PHF21A:NM_001101802:exon9:c.C879T:p.T293T,PHF21A:NM_016621:exon9:c.C882T:p.T294T	exonic	ENSG00000135365	NA	synonymous SNV	ENSG00000135365:ENST00000257821:exon9:c.C882T:p.T294T,ENSG00000135365:ENST00000323180:exon9:c.C882T:p.T294T,ENSG00000135365:ENST00000418153:exon9:c.C879T:p.T293T	Score=723;Name=lod=1155	NA	11p11.2	NA	NA	NA	NA	rs35646259	0.0023	0.0023	0.004	0.000798722	0.003	NA	0.0014	NA	NA	0.0026	NA	0.01	NA	0.0019	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.361724	1.361724	NA	0.003605	0.001817	NA	NA	NA	6.6581616
986	2	11778907	11778907	C	T	exonic	GREB1	NA	synonymous SNV	GREB1:NM_014668:exon32:c.C5658T:p.S1886S	exonic	ENSG00000196208	NA	synonymous SNV	ENSG00000196208:ENST00000396123:exon15:c.C2652T:p.S884S,ENSG00000196208:ENST00000234142:exon31:c.C5658T:p.S1886S,ENSG00000196208:ENST00000381486:exon32:c.C5658T:p.S1886S	Score=529;Name=lod=188	NA	2p25.1	NA	NA	NA	NA	rs138273238	0.0014	0.0014	0.002	0.00139776	0.005	NA	NA	NA	0.002	0.004	NA	NA	NA	0.0011	0.004	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.082463	NA	NA	0.002549	0.000526	NA	NA	NA	6.6580176
986	6	111527803	111527803	T	C	exonic	SLC16A10	NA	synonymous SNV	SLC16A10:NM_018593:exon4:c.T951C:p.H317H	exonic	ENSG00000112394	NA	synonymous SNV	ENSG00000112394:ENST00000368850:exon3:c.T9C:p.H3H,ENSG00000112394:ENST00000368851:exon4:c.T951C:p.H317H	NA	NA	6q21	Score=799;Name=V$OCT1_04	NA	NA	NA	rs149374548	0.0018	0.0018	NA	0.00119808	0.005	NA	NA	NA	0.001	0.01	NA	NA	NA	0.0021	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.742347	NA	NA	0.001628	0	NA	NA	NA	6.6579386
986	11	3039866	3039866	G	A	exonic	CARS	NA	synonymous SNV	CARS:NM_001751:exon12:c.C1260T:p.A420A,CARS:NM_139273:exon12:c.C1260T:p.A420A,CARS:NM_001014437:exon13:c.C1509T:p.A503A,CARS:NM_001194997:exon13:c.C1509T:p.A503A	exonic	ENSG00000110619	NA	synonymous SNV	ENSG00000110619:ENST00000278224:exon12:c.C1260T:p.A420A,ENSG00000110619:ENST00000397111:exon12:c.C1260T:p.A420A,ENSG00000110619:ENST00000380525:exon13:c.C1509T:p.A503A,ENSG00000110619:ENST00000397114:exon13:c.C1230T:p.A410A,ENSG00000110619:ENST00000401769:exon13:c.C1299T:p.A433A	Score=603;Name=lod=377	NA	11p15.4	NA	NA	NA	NA	rs80041195	0.0014	0.0014	0.002	0.00119808	0.003	NA	0.0029	NA	0.001	0.0026	NA	0.0028	NA	0.0027	0.0031	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.399787	NA	NA	0.003141	0.000681	NA	NA	NA	6.6578256
986	12	57920935	57920935	C	A	exonic	MBD6	NA	synonymous SNV	MBD6:NM_052897:exon7:c.C2007A:p.A669A	exonic	ENSG00000166987	NA	synonymous SNV	ENSG00000166987:ENST00000547545:exon1:c.C510A:p.A170A,ENSG00000166987:ENST00000355673:exon7:c.C2007A:p.A669A,ENSG00000166987:ENST00000431731:exon7:c.C2007A:p.A669A	Score=654;Name=lod=605	NA	12q13.3	NA	NA	NA	NA	rs76917839	0.01	0.01	0.005	0.00858626	NA	NA	0.0058	0.0287	0.001	NA	NA	0.01	0.02	0.0058	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.318036	NA	NA	0.003145	0.03297	NA	0.014	NA	6.6577216
986	10	37488689	37488689	G	C	exonic	ANKRD30A	NA	nonsynonymous SNV	ANKRD30A:NM_052997:exon30:c.G2583C:p.K861N	exonic	ENSG00000148513	NA	nonsynonymous SNV	ENSG00000148513:ENST00000361713:exon30:c.G2583C:p.K861N,ENSG00000148513:ENST00000602533:exon30:c.G2583C:p.K861N,ENSG00000148513:ENST00000374660:exon36:c.G2940C:p.K980N	NA	NA	10p11.21	NA	NA	NA	NA	rs1209750	0.52	0.52	0.523	0.482228	0.5875	0.3244	0.5029	0.671	0.2669	0.6	0.29	0.54	0.66	0.5155	0.66	0.32	T	0.207	B	0.022	B	.	.	1.000	P	1.1	L	3.42	T	-0.946	T	0.000	T	0.034	-1.408	0.022	-1.74	-3.843	-0.926	4.050	-1.408058	NA	0.44	0.572696	0.651404	NA	0.536	NA	6.6576374
986	12	57987816	57987816	G	A	exonic	PIP4K2C	NA	synonymous SNV	PIP4K2C:NM_001146258:exon2:c.G183A:p.E61E,PIP4K2C:NM_001146259:exon2:c.G183A:p.E61E,PIP4K2C:NM_001146260:exon2:c.G183A:p.E61E,PIP4K2C:NM_024779:exon2:c.G183A:p.E61E	exonic	ENSG00000166908	NA	synonymous SNV	ENSG00000166908:ENST00000354947:exon2:c.G183A:p.E61E,ENSG00000166908:ENST00000422156:exon2:c.G183A:p.E61E,ENSG00000166908:ENST00000540759:exon2:c.G183A:p.E61E,ENSG00000166908:ENST00000550095:exon2:c.G183A:p.E61E,ENSG00000166908:ENST00000550465:exon2:c.G183A:p.E61E,ENSG00000166908:ENST00000551772:exon2:c.G120A:p.E40E	Score=509;Name=lod=156	NA	12q13.3	NA	NA	NA	NA	rs61754175	0.01	0.01	0.012	0.0141773	NA	NA	0.0144	0.0454	0.001	NA	NA	0.01	0.05	0.0058	0.065	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.610414	NA	NA	0.003605	0.037676	NA	0.043	NA	6.6572616
986	10	3150973	3150973	C	T	exonic	PFKP	NA	synonymous SNV	PFKP:NM_002627:exon9:c.C951T:p.F317F,PFKP:NM_001242339:exon11:c.C927T:p.F309F	exonic	ENSG00000067057	NA	synonymous SNV	ENSG00000067057:ENST00000415005:exon4:c.C303T:p.F101F,ENSG00000067057:ENST00000381125:exon9:c.C951T:p.F317F,ENSG00000067057:ENST00000381075:exon11:c.C927T:p.F309F	Score=484;Name=lod=124	NA	10p15.2	NA	Name=Pol2	NA	NA	rs1132173	0.37	0.37	0.346	0.370407	0.332	0.5099	0.4006	0.2791	0.3681	0.31	0.53	0.34	0.28	0.3501	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.162316	NA	NA	0.327326	0.256241	NA	0.268	NA	6.6572406
986	5	159992655	159992655	T	C	exonic	ATP10B	NA	synonymous SNV	ATP10B:NM_025153:exon26:c.A4191G:p.V1397V	exonic	ENSG00000118322	NA	synonymous SNV	ENSG00000118322:ENST00000327245:exon26:c.A4191G:p.V1397V	NA	NA	5q34	NA	Name=ZNF263	Name=2	NA	rs3812005	0.33	0.33	0.298	0.356829	0.33	0.1706	0.4323	0.4781	0.3589	0.32	0.18	0.42	0.46	0.348	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.316613	NA	NA	0.331701	0.423469	NA	0.399	NA	6.6569656
986	11	837582	837582	G	A	exonic	CD151	NA	synonymous SNV	CD151:NM_001039490:exon6:c.G579A:p.G193G,CD151:NM_139030:exon6:c.G579A:p.G193G,CD151:NM_004357:exon7:c.G579A:p.G193G,CD151:NM_139029:exon7:c.G579A:p.G193G	exonic	ENSG00000177697	NA	synonymous SNV	ENSG00000177697:ENST00000528011:exon5:c.G579A:p.G193G,ENSG00000177697:ENST00000529810:exon5:c.G504A:p.G168G,ENSG00000177697:ENST00000397421:exon6:c.G579A:p.G193G,ENSG00000177697:ENST00000322008:exon7:c.G579A:p.G193G,ENSG00000177697:ENST00000397420:exon7:c.G579A:p.G193G,ENSG00000177697:ENST00000530726:exon7:c.G579A:p.G193G	NA	NA	11p15.5	Score=794;Name=V$PAX5_02	Name=Pol2(phosphoS2),Pol2	Name=14	NA	rs1130663	0.71	0.71	0.662	0.642173	0.663	0.8552	0.7925	0.5318	0.4438	0.67	0.89	0.78	0.52	0.6697	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.417221	NA	NA	0.677408	0.550909	NA	0.594	NA	6.6565586
986	9	94519645	94519645	G	A	exonic	ROR2	NA	synonymous SNV	ROR2:NM_004560:exon3:c.C372T:p.D124D	exonic	ENSG00000169071	NA	synonymous SNV	ENSG00000169071:ENST00000375708:exon3:c.C372T:p.D124D	Score=444;Name=lod=85	NA	9q22.31	NA	NA	NA	NA	rs145568368	0.0014	0.0014	NA	0.000798722	0.003	NA	NA	0.0008	NA	0.004	NA	NA	NA	0.0027	0.0047	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.837016	NA	NA	0.004651	0.001362	NA	NA	NA	6.6563156
986	17	4863574	4863574	G	A	exonic	SPAG7	NA	synonymous SNV	SPAG7:NM_004890:exon4:c.C282T:p.S94S	exonic	ENSG00000091640	NA	synonymous SNV	ENSG00000091640:ENST00000206020:exon4:c.C282T:p.S94S,ENSG00000091640:ENST00000573366:exon4:c.C129T:p.S43S,ENSG00000091640:ENST00000575142:exon4:c.C249T:p.S83S	Score=613;Name=lod=415	NA	17p13.2	NA	NA	NA	NA	rs73343383	0.02	0.02	0.025	0.0297524	0.001	NA	0.0058	0.1089	NA	0.0013	NA	0.0028	0.09	0.0089	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.662254	NA	NA	0.000476	0.085342	NA	0.058	NA	6.6562906
986	19	9721701	9721701	A	G	exonic	ZNF561	NA	synonymous SNV	ZNF561:NM_152289:exon6:c.T636C:p.L212L	exonic	ENSG00000171469	NA	synonymous SNV	ENSG00000171469:ENST00000354661:exon5:c.T228C:p.L76L,ENSG00000171469:ENST00000424629:exon5:c.T429C:p.L143L,ENSG00000171469:ENST00000302851:exon6:c.T636C:p.L212L,ENSG00000171469:ENST00000444611:exon6:c.T654C:p.L218L	NA	NA	19p13.2	NA	Name=KAP1	NA	NA	rs8109456	0.02	0.02	0.022	0.0291534	0.001	NA	0.0086	0.1051	NA	0.0013	NA	0.01	0.09	0.0086	0.093	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.362676	NA	NA	0.000814	0.093055	NA	0.029	NA	6.6562526
986	8	25720267	25720267	C	T	exonic	EBF2	NA	synonymous SNV	EBF2:NM_022659:exon11:c.G1056A:p.K352K	exonic	ENSG00000221818	NA	synonymous SNV	ENSG00000221818:ENST00000535548:exon3:c.G249A:p.K83K,ENSG00000221818:ENST00000408929:exon10:c.G612A:p.K204K,ENSG00000221818:ENST00000520164:exon11:c.G1056A:p.K352K	Score=646;Name=lod=564	NA	8p21.2	NA	NA	NA	NA	rs28454030	0.02	0.02	0.018	0.0277556	0.001	NA	0.0086	0.0998	NA	NA	NA	0.01	0.09	0.0082	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.666325	NA	NA	0.001704	0.083066	NA	0.014	NA	6.6557626
986	19	39804837	39804837	C	T	exonic	LRFN1	NA	synonymous SNV	LRFN1:NM_020862:exon1:c.G1140A:p.T380T	exonic	ENSG00000128011	NA	synonymous SNV	ENSG00000128011:ENST00000248668:exon1:c.G1140A:p.T380T	NA	NA	19q13.2	NA	NA	NA	Score=77;Name=1147136_0_-_77	rs61730567	0.02	0.02	0.019	0.0161741	0.004	NA	0.0058	0.0552	NA	0.0026	NA	0.01	0.08	0.0062	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.529717	NA	NA	0.000938	0.048943	NA	0.029	NA	6.6555286
987	9	97369151	97369151	G	A	exonic	FBP1	NA	synonymous SNV	FBP1:NM_000507:exon5:c.C651T:p.A217A,FBP1:NM_001127628:exon6:c.C651T:p.A217A	exonic	ENSG00000165140	NA	synonymous SNV	ENSG00000165140:ENST00000375326:exon5:c.C651T:p.A217A,ENSG00000165140:ENST00000414122:exon5:c.C399T:p.A133A,ENSG00000165140:ENST00000415431:exon6:c.C651T:p.A217A	Score=560;Name=lod=252	NA	9q22.32	Score=799;Name=V$ER_Q6	NA	NA	NA	rs1042144	0.36	0.36	0.333	0.352436	0.3499	0.5496	0.2046	0.2716	0.3661	0.35	0.53	0.22	0.27	0.3339	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.4215	1.4215	NA	0.32814	0.278938	NA	NA	NA	6.6547266
987	5	118969692	118969692	A	G	exonic	FAM170A	NA	synonymous SNV	FAM170A:NM_001163991:exon2:c.A108G:p.Q36Q,FAM170A:NM_182761:exon3:c.A249G:p.Q83Q	exonic	ENSG00000164334	NA	synonymous SNV	ENSG00000164334:ENST00000379555:exon2:c.A108G:p.Q36Q,ENSG00000164334:ENST00000504819:exon2:c.A108G:p.Q36Q,ENSG00000164334:ENST00000335286:exon3:c.A249G:p.Q83Q,ENSG00000164334:ENST00000509264:exon3:c.A249G:p.Q83Q,ENSG00000164334:ENST00000515256:exon3:c.A249G:p.Q83Q	NA	NA	5q23.1	Score=833;Name=V$TST1_01	NA	NA	NA	rs148156357	0.0027	0.0027	0.002	0.00199681	0.005	NA	0.0029	0.0008	0.002	0.01	NA	0.0028	NA	0.0036	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.205398	NA	NA	0.00373	0.001282	NA	NA	NA	6.6543366
987	1	86920904	86920904	A	G	exonic	CLCA2	NA	synonymous SNV	CLCA2:NM_006536:exon14:c.A2526G:p.Q842Q	exonic	ENSG00000137975	NA	synonymous SNV	ENSG00000137975:ENST00000370565:exon14:c.A2526G:p.Q842Q	NA	NA	1p22.3	NA	Name=CEBPB,TAL1_(SC-12984)	Name=2	NA	rs2390057	0.34	0.34	0.324	0.328874	0.335	0.4405	0.2435	0.2057	0.4346	0.34	0.43	0.28	0.25	0.3432	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.424113	NA	NA	0.334419	0.246255	ID=COSM146552;OCCURENCE=1(stomach)	0.275	NA	6.6540476
987	1	16351275	16351275	A	G	exonic	CLCNKA	NA	nonsynonymous SNV	CLCNKA:NM_001042704:exon4:c.A247G:p.R83G,CLCNKA:NM_004070:exon4:c.A247G:p.R83G	exonic	ENSG00000186510	NA	nonsynonymous SNV	ENSG00000186510:ENST00000331433:exon4:c.A247G:p.R83G,ENSG00000186510:ENST00000420078:exon4:c.A247G:p.R83G,ENSG00000186510:ENST00000375692:exon5:c.A247G:p.R83G	NA	NA	1p36.13	NA	NA	NA	NA	rs10927887	0.62	0.62	0.633	0.642971	0.5636	0.7688	0.4467	0.7201	0.6299	0.55	0.75	0.48	0.71	0.5636	0.75	0.3	T	0.0	B	0.0	B	0.728	N	0.990	P	1.415	L	-3.05	D	-0.919	T	0.000	T	0.056	0.068	4.371	0.872	-0.153	0.593	7.321	0.068461	NA	0.3	0.552093	0.696096	NA	0.659	NA	6.6540404
987	11	2185556	2185556	G	A	exonic	TH	NA	synonymous SNV	TH:NM_000360:exon13:c.C1401T:p.D467D,TH:NM_199292:exon14:c.C1494T:p.D498D,TH:NM_199293:exon14:c.C1482T:p.D494D	exonic	ENSG00000180176	NA	synonymous SNV	ENSG00000180176:ENST00000333684:exon11:c.C1131T:p.D377D,ENSG00000180176:ENST00000352909:exon13:c.C1401T:p.D467D,ENSG00000180176:ENST00000381175:exon14:c.C1482T:p.D494D,ENSG00000180176:ENST00000381178:exon14:c.C1494T:p.D498D	Score=458;Name=lod=97	NA	11p15.5	NA	NA	NA	NA	rs3842724	0.02	0.02	0.017	0.0283546	0.003	NA	0.013	0.0983	NA	0.0013	NA	0.01	0.09	0.0083	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.504015	NA	NA	0.001512	0.074739	NA	0.022	NA	6.6538546
987	6	7231521	7231521	C	T	exonic	RREB1	NA	synonymous SNV	RREB1:NM_001003698:exon10:c.C3189T:p.P1063P,RREB1:NM_001003699:exon10:c.C3189T:p.P1063P,RREB1:NM_001003700:exon10:c.C3189T:p.P1063P,RREB1:NM_001168344:exon10:c.C3189T:p.P1063P	exonic	ENSG00000124782	NA	synonymous SNV	ENSG00000124782:ENST00000334984:exon10:c.C3189T:p.P1063P,ENSG00000124782:ENST00000349384:exon10:c.C3189T:p.P1063P,ENSG00000124782:ENST00000379933:exon10:c.C3189T:p.P1063P,ENSG00000124782:ENST00000379938:exon10:c.C3189T:p.P1063P	Score=455;Name=lod=94	NA	6p24.3	NA	NA	NA	NA	rs148116530	0.0009	0.0009	0.003	0.00299521	0.003	NA	NA	NA	0.0123	0.0026	NA	NA	NA	0.0049	0.0051	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.237042	1.237042	NA	0.00512	0.000908	NA	NA	NA	6.6536466
987	9	100405627	100405627	T	C	exonic	NCBP1	NA	synonymous SNV	NCBP1:NM_002486:exon4:c.T366C:p.N122N	exonic	ENSG00000136937	NA	synonymous SNV	ENSG00000136937:ENST00000375147:exon4:c.T366C:p.N122N	Score=696;Name=lod=899	NA	9q22.33	NA	NA	NA	NA	rs34675777	0.03	0.03	0.04	0.0445288	NA	NA	0.0202	0.1581	NA	NA	NA	0.01	0.14	0.0126	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.895628	NA	NA	0.000465	0.136632	NA	0.036	NA	6.6536016
987	17	67111065	67111065	G	A	exonic	ABCA6	NA	synonymous SNV	ABCA6:NM_080284:exon13:c.C1620T:p.I540I	exonic	ENSG00000154262	NA	synonymous SNV	ENSG00000154262:ENST00000284425:exon13:c.C1620T:p.I540I	Score=454;Name=lod=93	NA	17q24.3	NA	NA	NA	NA	rs138479597	0.0018	0.0018	NA	0.00139776	0.003	NA	0.0043	0.0008	NA	0.0026	NA	0.01	NA	0.0033	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.478053	NA	NA	0.00686	0.000908	NA	NA	NA	6.6535066
987	9	134349958	134349958	A	C	exonic	PRRC2B	NA	synonymous SNV	PRRC2B:NM_013318:exon15:c.A2442C:p.A814A	exonic	ENSG00000130723	NA	synonymous SNV	ENSG00000130723:ENST00000456307:exon2:c.A249C:p.A83A,ENSG00000130723:ENST00000357304:exon15:c.A2442C:p.A814A	Score=659;Name=lod=637	NA	9q34.13	NA	NA	NA	NA	rs200268888	0.0009	0.0009	NA	0.00159744	0.004	NA	0.0058	NA	NA	0.0013	NA	0.0028	NA	0.0035	0.0057	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.644339	NA	NA	0.005711	0.001595	NA	NA	NA	6.6534556
987	14	105850736	105850736	C	T	exonic	PACS2	NA	synonymous SNV	PACS2:NM_001100913:exon17:c.C1827T:p.Y609Y,PACS2:NM_001243127:exon17:c.C1590T:p.Y530Y,PACS2:NM_015197:exon17:c.C1815T:p.Y605Y	exonic	ENSG00000179364	NA	synonymous SNV	ENSG00000179364:ENST00000551743:exon2:c.C357T:p.Y119Y,ENSG00000179364:ENST00000547217:exon16:c.C1725T:p.Y575Y,ENSG00000179364:ENST00000325438:exon17:c.C1815T:p.Y605Y,ENSG00000179364:ENST00000430725:exon17:c.C1590T:p.Y530Y,ENSG00000179364:ENST00000447393:exon17:c.C1827T:p.Y609Y,ENSG00000179364:ENST00000458164:exon17:c.C1827T:p.Y609Y	Score=539;Name=lod=207	NA	14q32.33	NA	NA	NA	NA	rs143071112	0.0014	0.0014	0.001	0.00179712	0.005	NA	0.0043	0.0008	NA	0.0026	NA	0.0028	NA	0.0042	0.0049	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.07223	NA	NA	0.004885	0.001135	NA	NA	NA	6.6525816
987	4	156634600	156634600	T	C	exonic	GUCY1A3	NA	synonymous SNV	GUCY1A3:NM_001130684:exon6:c.T1437C:p.N479N,GUCY1A3:NM_001130682:exon7:c.T1437C:p.N479N,GUCY1A3:NM_001130683:exon7:c.T1437C:p.N479N,GUCY1A3:NM_001130685:exon7:c.T732C:p.N244N,GUCY1A3:NM_001130687:exon7:c.T1437C:p.N479N,GUCY1A3:NM_001256449:exon7:c.T1437C:p.N479N,GUCY1A3:NM_000856:exon8:c.T1437C:p.N479N	exonic	ENSG00000164116	NA	synonymous SNV	ENSG00000164116:ENST00000513574:exon6:c.T1437C:p.N479N,ENSG00000164116:ENST00000296518:exon7:c.T1437C:p.N479N,ENSG00000164116:ENST00000393832:exon7:c.T663C:p.N221N,ENSG00000164116:ENST00000455639:exon7:c.T1437C:p.N479N,ENSG00000164116:ENST00000506455:exon7:c.T1437C:p.N479N,ENSG00000164116:ENST00000511507:exon7:c.T1437C:p.N479N,ENSG00000164116:ENST00000511108:exon8:c.T1437C:p.N479N	NA	NA	4q32.1	Score=775;Name=V$ER_Q6	NA	NA	NA	rs143472664	0.0041	0.0041	0.001	0.00239617	0.006	NA	0.0072	NA	0.001	0.01	NA	0.01	0.002	0.0036	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.52329	NA	NA	0.005	0.000681	NA	NA	NA	6.6520666
987	20	62319919	62319919	G	A	exonic	RTEL1	NA	synonymous SNV	RTEL1:NM_016434:exon21:c.G1761A:p.P587P,RTEL1:NM_032957:exon21:c.G1833A:p.P611P	exonic	ENSG00000026036,ENSG00000258366	NA	synonymous SNV	ENSG00000258366:ENST00000425905:exon2:c.G87A:p.P29P,ENSG00000026036:ENST00000492259:exon19:c.G1845A:p.P615P,ENSG00000026036:ENST00000482936:exon20:c.G1761A:p.P587P,ENSG00000258366:ENST00000318100:exon21:c.G1761A:p.P587P,ENSG00000258366:ENST00000360203:exon21:c.G1761A:p.P587P,ENSG00000258366:ENST00000370018:exon21:c.G1761A:p.P587P,ENSG00000258366:ENST00000508582:exon21:c.G1833A:p.P611P	NA	NA	20q13.33	NA	Name=Pol2,Pol2(phosphoS2)	NA	NA	rs116900568	0.0014	0.0014	NA	0.00179712	0.006	NA	0.0043	NA	NA	0.004	NA	NA	NA	0.0041	0.0049	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.542143	NA	NA	0.0049	0.000456	ID=COSM35349;OCCURENCE=1(central_nervous_system)	NA	NA	6.6516666
987	19	38189694	38189694	G	A	exonic	ZNF607	NA	synonymous SNV	ZNF607:NM_001172677:exon5:c.C1335T:p.Y445Y,ZNF607:NM_032689:exon5:c.C1338T:p.Y446Y	exonic	ENSG00000198182	NA	synonymous SNV	ENSG00000198182:ENST00000355202:exon5:c.C1338T:p.Y446Y,ENSG00000198182:ENST00000395835:exon5:c.C1335T:p.Y445Y	Score=414;Name=lod=64	NA	19q13.12	NA	NA	NA	NA	rs117357379	0.0037	0.0037	0	0.00279553	0.006	NA	0.0101	0.0008	NA	0.01	NA	0.01	NA	0.0034	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.15107	NA	NA	0.005698	0.000908	NA	0.007	NA	6.6515686
987	15	86262383	86262383	G	A	exonic	AKAP13	NA	synonymous SNV	AKAP13:NM_001270546:exon15:c.G1941A:p.A647A,AKAP13:NM_006738:exon23:c.G6090A:p.A2030A,AKAP13:NM_007200:exon23:c.G6078A:p.A2026A	exonic	ENSG00000170776	NA	synonymous SNV	ENSG00000170776:ENST00000394510:exon10:c.G813A:p.A271A,ENSG00000170776:ENST00000361243:exon23:c.G6090A:p.A2030A,ENSG00000170776:ENST00000394518:exon23:c.G6078A:p.A2026A	NA	NA	15q25.3	NA	NA	Name=2	NA	rs79991499	0.0046	0.0046	0.009	0.00239617	0.007	NA	0.0058	0.0008	NA	0.01	NA	0.01	0.002	0.003	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.582599	NA	NA	0.00535	0.001362	NA	0.014	NA	6.6513166
987	6	10751379	10751379	C	T	exonic	TMEM14B	NA	synonymous SNV	TMEM14B:NM_030969:exon4:c.C114T:p.S38S	exonic	ENSG00000137210	NA	synonymous SNV	ENSG00000137210:ENST00000478732:exon2:c.C48T:p.S16S,ENSG00000137210:ENST00000379542:exon4:c.C114T:p.S38S,ENSG00000137210:ENST00000467317:exon4:c.C114T:p.S38S,ENSG00000137210:ENST00000475942:exon4:c.C114T:p.S38S	Score=440;Name=lod=82	NA	6p24.2	NA	NA	NA	NA	rs1046427	0.02	0.02	0.021	0.0233626	0.004	NA	0.0115	0.0779	0.002	NA	NA	0.01	0.08	0.0082	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.653859	NA	NA	0.003256	0.059491	NA	0.036	NA	6.6512106
987	19	3752874	3752874	A	G	exonic	APBA3	NA	nonsynonymous SNV	APBA3:NM_004886:exon7:c.T1126C:p.C376R	exonic	ENSG00000011132	NA	nonsynonymous SNV	ENSG00000011132:ENST00000316757:exon7:c.T1126C:p.C376R	Score=538;Name=lod=205	NA	19p13.3	NA	NA	NA	NA	rs8102086	0.56	0.56	0.519	0.539337	0.5676	0.63	0.6916	0.323	0.6012	0.55	0.66	0.68	0.37	0.5633	0.68	0.09	T	0.0	B	0.0	B	0.208	N	0.984	P	-0.345	N	3.36	T	-1.055	T	0.000	T	0.013	1.326	10.35	1.84	-0.086	0.931	2.674	1.325729	1.325729	0.12	0.551652	0.409628	NA	0.587	NA	6.6507814
987	7	33055315	33055315	C	T	exonic	NT5C3A	NA	synonymous SNV	NT5C3A:NM_001002010:exon8:c.G876A:p.E292E,NT5C3A:NM_001002009:exon9:c.G759A:p.E253E,NT5C3A:NM_016489:exon9:c.G759A:p.E253E,NT5C3A:NM_001166118:exon10:c.G723A:p.E241E	exonic	ENSG00000122643	NA	synonymous SNV	ENSG00000122643:ENST00000242210:exon8:c.G876A:p.E292E,ENSG00000122643:ENST00000405342:exon8:c.G759A:p.E253E,ENSG00000122643:ENST00000396152:exon9:c.G759A:p.E253E,ENSG00000122643:ENST00000381626:exon10:c.G723A:p.E241E,ENSG00000122643:ENST00000409467:exon10:c.G723A:p.E241E	Score=622;Name=lod=451	NA	7p14.3	NA	NA	NA	NA	rs72555746	0.0023	0.0023	0.002	0.00938498	0.004	0.002	0.0029	NA	0.0399	0.004	NA	0.01	NA	0.0076	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.69355	NA	NA	0.004302	0.000908	NA	0.014	NA	6.6507646
987	7	32590951	32590951	G	C	exonic	AVL9	NA	synonymous SNV	AVL9:NM_015060:exon5:c.G378C:p.L126L	exonic	ENSG00000105778	NA	synonymous SNV	ENSG00000105778:ENST00000446718:exon4:c.G171C:p.L57L,ENSG00000105778:ENST00000318709:exon5:c.G378C:p.L126L,ENSG00000105778:ENST00000404479:exon5:c.G378C:p.L126L,ENSG00000105778:ENST00000409301:exon5:c.G378C:p.L126L	Score=662;Name=lod=655	NA	7p14.3	NA	NA	NA	NA	rs146342571	0.0018	0.0018	NA	0.00119808	0.003	NA	0.0029	NA	0.001	0.0013	NA	0.01	0.002	0.0048	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.825969	NA	NA	0.008265	0.001589	NA	0.007	NA	6.6506016
987	1	110256162	110256162	C	G	exonic	GSTM5	NA	synonymous SNV	GSTM5:NM_000851:exon4:c.C234G:p.R78R	exonic	ENSG00000134201	NA	synonymous SNV	ENSG00000134201:ENST00000369813:exon2:c.C111G:p.R37R,ENSG00000134201:ENST00000256593:exon4:c.C234G:p.R78R,ENSG00000134201:ENST00000369812:exon4:c.C291G:p.R97R	Score=551;Name=lod=231	NA	1p13.3	NA	NA	NA	NA	rs144839885	0.0027	0.0027	NA	0.0071885	0.0089	NA	0.0058	NA	0.0235	0.004	NA	0.01	0.002	0.0079	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.01377	NA	NA	NA	NA	NA	NA	NA	6.6498666
987	9	3257122	3257122	C	T	exonic	RFX3	NA	synonymous SNV	RFX3:NM_002919:exon15:c.G1683A:p.Q561Q,RFX3:NM_134428:exon15:c.G1683A:p.Q561Q	exonic	ENSG00000080298	NA	synonymous SNV	ENSG00000080298:ENST00000449234:exon1:c.G78A:p.Q26Q,ENSG00000080298:ENST00000458034:exon4:c.G402A:p.Q134Q,ENSG00000080298:ENST00000358730:exon13:c.G1683A:p.Q561Q,ENSG00000080298:ENST00000302303:exon15:c.G1683A:p.Q561Q,ENSG00000080298:ENST00000382004:exon15:c.G1683A:p.Q561Q	Score=758;Name=lod=1604	NA	9p24.2	NA	NA	NA	NA	rs35483263	0.0018	0.0018	0.001	0.00119808	0.005	NA	NA	NA	0.001	0.01	NA	NA	NA	0.0044	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.124845	NA	NA	0.007442	0.000908	NA	NA	NA	6.6498246
987	16	30376486	30376486	T	C	exonic	TBC1D10B	NA	synonymous SNV	TBC1D10B:NM_015527:exon3:c.A1104G:p.K368K	exonic	ENSG00000169221	NA	synonymous SNV	ENSG00000169221:ENST00000490703:exon1:c.A48G:p.K16K,ENSG00000169221:ENST00000409939:exon3:c.A1104G:p.K368K	Score=647;Name=lod=566	NA	16p11.2	Score=682;Name=V$P53_01	NA	NA	NA	rs8049108	0.32	0.32	0.316	0.345647	0.341	0.0804	0.2723	0.6218	0.3027	0.32	0.08	0.29	0.62	0.3365	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.311873	1.311873	NA	0.339651	0.574875	NA	0.457	NA	6.6495156
987	11	47701528	47701528	C	A	exonic	AGBL2	NA	nonsynonymous SNV	AGBL2:NM_024783:exon13:c.G2013T:p.M671I	exonic	ENSG00000165923	NA	nonsynonymous SNV	ENSG00000165923:ENST00000298861:exon12:c.G2013T:p.M671I,ENSG00000165923:ENST00000357610:exon12:c.G2013T:p.M671I,ENSG00000165923:ENST00000528244:exon12:c.G1899T:p.M633I,ENSG00000165923:ENST00000525123:exon13:c.G2013T:p.M671I	Score=534;Name=lod=198	NA	11p11.2	NA	NA	NA	NA	rs12286721	0.61	0.61	0.587	0.580671	0.5666	0.5694	0.6657	0.6377	0.4693	0.57	0.65	0.64	0.6	0.5717	0.65	0.14	T	0.0	B	0.0	B	0.004	N	0.999	P	0	N	3.01	T	-1.026	T	0.000	T	0.067	1.418	10.68	0.549	0.212	0.469	6.045	1.41756	1.41756	0.1	0.546068	0.615402	NA	0.645	NA	6.6489654
987	11	65304124	65304124	C	T	exonic	SCYL1	NA	synonymous SNV	SCYL1:NM_001048218:exon13:c.C1719T:p.A573A,SCYL1:NM_020680:exon13:c.C1719T:p.A573A	exonic	ENSG00000142186	NA	synonymous SNV	ENSG00000142186:ENST00000528545:exon2:c.C138T:p.A46A,ENSG00000142186:ENST00000527009:exon12:c.C1290T:p.A430A,ENSG00000142186:ENST00000270176:exon13:c.C1719T:p.A573A,ENSG00000142186:ENST00000279270:exon13:c.C1719T:p.A573A,ENSG00000142186:ENST00000420247:exon13:c.C1719T:p.A573A,ENSG00000142186:ENST00000524944:exon13:c.C1719T:p.A573A,ENSG00000142186:ENST00000525364:exon13:c.C1719T:p.A573A,ENSG00000142186:ENST00000527630:exon13:c.C1719T:p.A573A,ENSG00000142186:ENST00000533862:exon13:c.C1719T:p.A573A	Score=514;Name=lod=163	NA	11q13.1	NA	NA	NA	NA	rs56296579	0.0037	0.0037	0.005	0.00239617	0.008	NA	0.0029	NA	0.002	0.01	NA	0.0028	NA	0.0041	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.713746	1.713746	NA	0.00567	0.001405	NA	NA	NA	6.6488966
987	7	138740037	138740037	G	C	exonic	ZC3HAV1	NA	nonsynonymous SNV	ZC3HAV1:NM_020119:exon10:c.C2101G:p.Q701E	exonic	ENSG00000105939	NA	nonsynonymous SNV	ENSG00000105939:ENST00000242351:exon10:c.C2101G:p.Q701E,ENSG00000105939:ENST00000464606:exon10:c.C2467G:p.Q823E	NA	NA	7q34	NA	NA	NA	NA	rs2297236	0.58	0.58	0.556	0.565096	0.5586	0.6776	0.5879	0.4629	0.5777	0.56	0.69	0.56	0.48	0.5597	0.69	0.63	T	0.056	B	0.024	B	0.398	N	1.000	P	2.14	M	3.3	T	-1.009	T	0.000	T	0.029	1.153	9.696	1.78	0.508	0.699	6.474	1.153136	NA	1	0.566744	0.459374	ID=COSM1131699;OCCURENCE=1(prostate)	0.449	NA	6.6482894
987	1	29040799	29040799	A	G	exonic	GMEB1	NA	synonymous SNV	GMEB1:NM_006582:exon10:c.A1236G:p.P412P,GMEB1:NM_024482:exon10:c.A1206G:p.P402P	exonic	ENSG00000162419	NA	synonymous SNV	ENSG00000162419:ENST00000294409:exon10:c.A1236G:p.P412P,ENSG00000162419:ENST00000361872:exon10:c.A1206G:p.P402P,ENSG00000162419:ENST00000373816:exon10:c.A1206G:p.P402P	NA	NA	1p35.3	Score=960;Name=V$AP2REP_01	NA	NA	NA	rs16837667	0.0005	0.0005	NA	0.00219649	0.004	NA	0.0014	NA	0.0061	0.0013	NA	NA	NA	0.0063	0.0083	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.437808	NA	NA	0.008256	0.001135	NA	NA	NA	6.6481106
987	17	41245237	41245237	A	G	exonic	BRCA1	NA	synonymous SNV	BRCA1:NM_007297:exon9:c.T2170C:p.L724L,BRCA1:NM_007294:exon10:c.T2311C:p.L771L,BRCA1:NM_007300:exon10:c.T2311C:p.L771L	exonic	ENSG00000012048	NA	synonymous SNV	ENSG00000012048:ENST00000309486:exon9:c.T1423C:p.L475L,ENSG00000012048:ENST00000493795:exon9:c.T2170C:p.L724L,ENSG00000012048:ENST00000346315:exon10:c.T2311C:p.L771L,ENSG00000012048:ENST00000354071:exon10:c.T2311C:p.L771L,ENSG00000012048:ENST00000357654:exon10:c.T2311C:p.L771L,ENSG00000012048:ENST00000471181:exon10:c.T2311C:p.L771L	NA	NA	17q21.31	NA	NA	Name=52	NA	rs16940	0.3	0.3	0.277	0.335264	0.3529	0.371	0.3674	0.1573	0.498	0.35	0.33	0.38	0.13	0.342	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.08811	NA	NA	0.323721	0.187699	NA	0.254	CLINSIG=non-pathogenic|untested|non-pathogenic|non-pathogenic;CLNDBN=Breast-ovarian_cancer\x2c_familial_1|Familial_cancer_of_breast|not_provided|Neoplastic_Syndromes\x2c_Hereditary;CLNREVSTAT=mult|not|single|single;CLNACC=RCV000111822.2|RCV000114985.1|RCV000123904.1|RCV000128982.1;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet|GeneReviews:MedGen:OMIM:SNOMED_CT|.|MedGen;CLNDSDBID=NBK1247:C2676676:604370:ORPHA145|NBK1247:C0346153:114480:254843006|.|C0027672	6.6480456
987	11	67353970	67353970	T	C	exonic	GSTP1	NA	synonymous SNV	GSTP1:NM_000852:exon7:c.T555C:p.S185S	exonic	ENSG00000084207	NA	synonymous SNV	ENSG00000084207:ENST00000398603:exon6:c.T447C:p.S149S,ENSG00000084207:ENST00000398606:exon7:c.T555C:p.S185S	NA	NA	11q13.2	Score=787;Name=V$AHRARNT_02	Name=CTCF_(SC-5916)	NA	NA	rs4891	0.34	0.34	0.332	0.35603	0.337	0.1736	0.4885	0.5182	0.2505	0.33	0.16	0.43	0.48	0.3404	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.191818	NA	NA	0.341335	0.454009	NA	0.348	NA	6.6479316
987	1	154744807	154744807	C	T	exonic	KCNN3	NA	synonymous SNV	KCNN3:NM_001204087:exon3:c.G1092A:p.L364L,KCNN3:NM_002249:exon3:c.G1092A:p.L364L,KCNN3:NM_170782:exon3:c.G177A:p.L59L	exonic	ENSG00000143603	NA	synonymous SNV	ENSG00000143603:ENST00000271915:exon3:c.G1092A:p.L364L,ENSG00000143603:ENST00000358505:exon3:c.G153A:p.L51L,ENSG00000143603:ENST00000361147:exon3:c.G177A:p.L59L	Score=625;Name=lod=462	NA	1q21.3	NA	NA	NA	NA	rs1051614	NA	NA	NA	0.00439297	0.0089	NA	0.0101	0.0015	0.0041	NA	NA	NA	NA	0.0099	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.605586	2.605586	NA	NA	NA	NA	0.007	NA	6.6478666
987	17	73568031	73568031	C	T	exonic	LLGL2	NA	synonymous SNV	LLGL2:NM_001031803:exon19:c.C2346T:p.L782L,LLGL2:NM_004524:exon19:c.C2346T:p.L782L	exonic	ENSG00000073350	NA	synonymous SNV	ENSG00000073350:ENST00000167462:exon19:c.C2346T:p.L782L,ENSG00000073350:ENST00000392550:exon19:c.C2346T:p.L782L,ENSG00000073350:ENST00000577200:exon19:c.C2346T:p.L782L	Score=480;Name=lod=119	NA	17q25.1	NA	NA	NA	NA	rs116275079	0.02	0.02	0.021	0.0427316	0.001	0.003	0.0173	0.1074	0.0573	NA	NA	0.02	0.08	0.0156	0.086	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.590818	1.590818	NA	0.002326	0.086473	NA	0.007	NA	6.6477406
987	2	17962924	17962924	C	T	exonic	GEN1	NA	synonymous SNV	GEN1:NM_001130009:exon14:c.C2445T:p.Y815Y,GEN1:NM_182625:exon14:c.C2445T:p.Y815Y	exonic	ENSG00000178295	NA	synonymous SNV	ENSG00000178295:ENST00000317402:exon14:c.C2445T:p.Y815Y,ENSG00000178295:ENST00000381254:exon14:c.C2445T:p.Y815Y	NA	NA	2p24.2	NA	Name=FOXA2_(SC-6554),FOXA1_(SC-101058),FOXA1_(C-20)	NA	NA	rs148781334	0.01	0.01	0.003	0.00339457	0.0089	NA	0.0072	NA	0.0031	0.01	NA	0.01	NA	0.0044	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.130331	NA	NA	0.006395	0.001816	NA	NA	NA	6.6469716
987	15	42632915	42632915	A	G	exonic	GANC	NA	synonymous SNV	GANC:NM_198141:exon18:c.A2115G:p.E705E	exonic	ENSG00000214013	NA	synonymous SNV	ENSG00000214013:ENST00000318010:exon18:c.A2115G:p.E705E	Score=369;Name=lod=42	NA	15q15.1	NA	NA	NA	NA	rs117264272	0.0037	0.0037	0.007	0.00319489	0.005	NA	0.0086	NA	0.0051	0.01	NA	0.01	NA	0.0063	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.214277	NA	NA	0.008607	0.001589	NA	0.014	NA	6.6467596
987	2	233347590	233347590	C	T	exonic	ECEL1	NA	synonymous SNV	ECEL1:NM_004826:exon10:c.G1656A:p.K552K	exonic	ENSG00000171551	NA	synonymous SNV	ENSG00000171551:ENST00000409941:exon9:c.G1656A:p.K552K,ENSG00000171551:ENST00000304546:exon10:c.G1656A:p.K552K	Score=569;Name=lod=274	NA	2q37.1	NA	NA	NA	NA	rs1190429	0.0032	0.0032	0.001	0.00239617	0.0089	NA	0.0043	NA	NA	0.01	NA	0.01	NA	0.0032	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.059892	NA	NA	0.008023	0.001362	NA	NA	NA	6.6465436
987	5	169021610	169021610	C	T	exonic	SPDL1	NA	synonymous SNV	SPDL1:NM_017785:exon7:c.C816T:p.L272L	exonic	ENSG00000040275	NA	synonymous SNV	ENSG00000040275:ENST00000265295:exon7:c.C816T:p.L272L	Score=608;Name=lod=396	NA	5q35.1	NA	NA	NA	NA	rs4493692	0.64	0.64	0.659	0.638778	0.673	0.7331	0.5879	0.5257	0.6953	0.69	0.72	0.59	0.53	0.6572	0.72	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.983	T	0.000	T	.	-0.16	3.217	-2.19	-0.607	-0.103	4.624	-0.160356	NA	NA	0.69	0.551521	NA	0.565	NA	6.6464666
987	5	422906	422906	C	T	exonic	AHRR	NA	synonymous SNV	AHRR:NM_001242412:exon6:c.C516T:p.C172C,AHRR:NM_020731:exon6:c.C516T:p.C172C	exonic	ENSG00000063438	NA	synonymous SNV	ENSG00000063438:ENST00000506456:exon2:c.C84T:p.C28C,ENSG00000063438:ENST00000512529:exon4:c.C54T:p.C18C,ENSG00000063438:ENST00000316418:exon6:c.C516T:p.C172C,ENSG00000063438:ENST00000505113:exon6:c.C516T:p.C172C	Score=617;Name=lod=430	NA	5p15.33	NA	NA	NA	NA	rs61755969	0.01	0.01	0.014	0.01877	0.005	NA	0.0029	0.0537	0.0164	0.01	NA	0.0028	0.04	0.0084	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.527848	1.527848	NA	0.007005	0.039919	NA	0.036	NA	6.6462616
987	10	97447373	97447373	A	T	exonic	TCTN3	NA	synonymous SNV	TCTN3:NM_015631:exon4:c.T603A:p.T201T	exonic	ENSG00000119977	NA	synonymous SNV	ENSG00000119977:ENST00000265993:exon4:c.T603A:p.T201T,ENSG00000119977:ENST00000371209:exon4:c.T603A:p.T201T,ENSG00000119977:ENST00000371217:exon4:c.T657A:p.T219T	NA	NA	10q24.1	NA	NA	Name=3	NA	rs10786229	0.44	0.44	0.44	0.42472	0.3469	0.7133	0.255	0.4236	0.3292	0.35	0.7	0.26	0.38	0.3544	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.589182	NA	NA	0.319302	0.415116	NA	0.319	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118618.2;CLNDSDB=.;CLNDSDBID=.	6.6460646
987	9	116770776	116770776	C	T	exonic	ZNF618	NA	synonymous SNV	ZNF618:NM_133374:exon8:c.C600T:p.V200V	exonic	ENSG00000157657	NA	synonymous SNV	ENSG00000157657:ENST00000452710:exon7:c.C564T:p.V188V,ENSG00000157657:ENST00000288466:exon8:c.C600T:p.V200V,ENSG00000157657:ENST00000374124:exon8:c.C600T:p.V200V,ENSG00000157657:ENST00000374126:exon9:c.C696T:p.V232V	Score=483;Name=lod=123	NA	9q32	Score=852;Name=V$FAC1_01	NA	NA	NA	rs3748183	0.35	0.35	0.311	0.303315	0.3439	0.5962	0.2565	0.062	0.319	0.37	0.63	0.26	0.08	0.3498	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.161447	NA	NA	0.326951	0.108662	NA	0.348	NA	6.6460156
987	9	116770785	116770785	G	A	exonic	ZNF618	NA	synonymous SNV	ZNF618:NM_133374:exon8:c.G609A:p.T203T	exonic	ENSG00000157657	NA	synonymous SNV	ENSG00000157657:ENST00000452710:exon7:c.G573A:p.T191T,ENSG00000157657:ENST00000288466:exon8:c.G609A:p.T203T,ENSG00000157657:ENST00000374124:exon8:c.G609A:p.T203T,ENSG00000157657:ENST00000374126:exon9:c.G705A:p.T235T	Score=483;Name=lod=123	NA	9q32	Score=790;Name=V$HTF_01	NA	NA	NA	rs3748182	0.35	0.35	0.304	0.303914	0.3439	0.5962	0.2565	0.062	0.3221	0.37	0.63	0.26	0.08	0.3503	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.090013	NA	NA	0.326778	0.108428	NA	0.348	NA	6.6456886
987	19	53740849	53740849	A	G	exonic	ZNF677	NA	synonymous SNV	ZNF677:NM_182609:exon5:c.T1131C:p.C377C	exonic	ENSG00000197928	NA	synonymous SNV	ENSG00000197928:ENST00000333952:exon5:c.T1131C:p.C377C,ENSG00000197928:ENST00000598513:exon5:c.T1131C:p.C377C	NA	NA	19q13.42	NA	Name=KAP1,ZNF274,SETDB1	NA	NA	rs147088386	0.01	0.01	0.003	0.00339457	0.0099	NA	0.0058	0.0008	0.002	0.01	NA	0.01	NA	0.0052	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.711707	NA	NA	0.00593	0.000908	ID=COSM1396076;OCCURENCE=1(large_intestine)	NA	NA	6.6456366
987	2	173352458	173352458	C	G	exonic	ITGA6	NA	synonymous SNV	ITGA6:NM_000210:exon17:c.C2247G:p.V749V,ITGA6:NM_001079818:exon17:c.C2247G:p.V749V	exonic	ENSG00000091409	NA	synonymous SNV	ENSG00000091409:ENST00000264107:exon17:c.C2247G:p.V749V,ENSG00000091409:ENST00000343713:exon17:c.C2232G:p.V744V,ENSG00000091409:ENST00000409080:exon17:c.C2247G:p.V749V,ENSG00000091409:ENST00000409532:exon17:c.C1890G:p.V630V,ENSG00000091409:ENST00000458358:exon17:c.C2232G:p.V744V,ENSG00000091409:ENST00000264106:exon18:c.C2364G:p.V788V,ENSG00000091409:ENST00000375221:exon18:c.C2364G:p.V788V,ENSG00000091409:ENST00000442250:exon18:c.C2364G:p.V788V	Score=531;Name=lod=191	NA	2q31.1	NA	NA	NA	NA	rs61748247	0.0032	0.0032	0.004	0.00459265	0.008	NA	0.0014	NA	0.0143	0.01	NA	NA	NA	0.0053	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.958749	NA	NA	0.007791	0.00227	NA	NA	NA	6.6455756
987	1	242162275	242162275	G	A	exonic	MAP1LC3C	NA	synonymous SNV	MAP1LC3C:NM_001004343:exon1:c.C36T:p.P12P	exonic	ENSG00000197769	NA	synonymous SNV	ENSG00000197769:ENST00000357246:exon1:c.C36T:p.P12P	Score=463;Name=lod=102	NA	1q43	NA	NA	NA	NA	rs61737761	0.02	0.02	0.028	0.0347444	0.004	0.001	0.0144	0.1006	0.0266	0.004	NA	0.01	0.1	0.0133	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.049664	NA	NA	0.003838	0.091054	NA	0.043	NA	6.6455286
987	10	21827796	21827796	G	A	exonic	MLLT10	NA	synonymous SNV	MLLT10:NM_001195626:exon2:c.G195A:p.P65P,MLLT10:NM_001195627:exon3:c.G195A:p.P65P,MLLT10:NM_001195628:exon3:c.G195A:p.P65P,MLLT10:NM_001195630:exon3:c.G195A:p.P65P,MLLT10:NM_004641:exon3:c.G195A:p.P65P	exonic	ENSG00000078403	NA	synonymous SNV	ENSG00000078403:ENST00000377059:exon2:c.G195A:p.P65P,ENSG00000078403:ENST00000307729:exon3:c.G195A:p.P65P,ENSG00000078403:ENST00000377072:exon3:c.G195A:p.P65P,ENSG00000078403:ENST00000377091:exon3:c.G195A:p.P65P,ENSG00000078403:ENST00000377100:exon3:c.G195A:p.P65P,ENSG00000078403:ENST00000446906:exon3:c.G195A:p.P65P	Score=676;Name=lod=746	NA	10p12.31	NA	NA	NA	NA	rs1802669	0.28	0.28	0.3	0.277356	0.3579	0.0546	0.2277	0.4327	0.2495	0.35	0.03	0.25	0.46	0.3118	0.46	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.922	T	0.000	T	.	1.172	9.769	0.171	-0.145	-0.310	0.784	1.172082	NA	NA	0.351744	0.395143	NA	0.478	NA	6.6452226
987	15	84651185	84651185	C	A	exonic	ADAMTSL3	NA	synonymous SNV	ADAMTSL3:NM_207517:exon21:c.C2805A:p.P935P	exonic	ENSG00000156218	NA	synonymous SNV	ENSG00000156218:ENST00000286744:exon21:c.C2805A:p.P935P,ENSG00000156218:ENST00000567476:exon21:c.C2805A:p.P935P	Score=449;Name=lod=89	NA	15q25.2	Score=781;Name=V$STAT5A_02	NA	NA	NA	rs8031704	0.4	0.4	0.422	0.375998	0.3419	0.38	0.2536	0.5681	0.2342	0.35	0.39	0.29	0.56	0.3355	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.22444	NA	NA	0.34407	0.538357	ID=COSM147963;OCCURENCE=1(stomach),1(prostate)	0.428	NA	6.6451966
987	12	42491379	42491379	T	A	exonic	GXYLT1	NA	synonymous SNV	GXYLT1:NM_001099650:exon6:c.A933T:p.R311R,GXYLT1:NM_173601:exon7:c.A1026T:p.R342R	exonic	ENSG00000151233	NA	synonymous SNV	ENSG00000151233:ENST00000280876:exon6:c.A933T:p.R311R,ENSG00000151233:ENST00000398675:exon7:c.A1026T:p.R342R	Score=575;Name=lod=289	NA	12q12	NA	NA	NA	NA	rs139072942	0.0046	0.0046	0.005	0.00319489	0.008	NA	0.0072	NA	0.0031	0.01	NA	0.01	NA	0.0053	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.340794	NA	NA	0.008177	0.000539	NA	NA	NA	6.6451896
988	11	4615949	4615949	G	A	exonic	OR52I1	NA	synonymous SNV	OR52I1:NM_001005169:exon1:c.G681A:p.R227R	exonic	ENSG00000232268	NA	synonymous SNV	ENSG00000232268:ENST00000530443:exon1:c.G681A:p.R227R,ENSG00000232268:ENST00000450052:exon2:c.G753A:p.R251R	Score=343;Name=lod=33	NA	11p15.4	NA	NA	NA	NA	rs200573064	NA	NA	0.003	0.00319489	0.0109	0.001	0.0043	NA	0.001	NA	NA	NA	NA	0.0039	0.007	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.079148	NA	NA	0.00698	0.000454	NA	NA	NA	6.6448866
988	1	160921049	160921049	A	G	exonic	ITLN2	NA	synonymous SNV	ITLN2:NM_080878:exon4:c.T225C:p.G75G	exonic	ENSG00000158764	NA	synonymous SNV	ENSG00000158764:ENST00000368029:exon4:c.T225C:p.G75G	NA	NA	1q23.3	Score=882;Name=V$YY1_01	NA	NA	NA	rs6693472	0.03	0.03	0.024	0.0449281	0.001	NA	0.0202	0.1195	0.0532	NA	NA	0.02	0.1	0.0187	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.022435	NA	NA	0.002442	0.11212	NA	0.051	NA	6.6445246
988	19	33131227	33131227	C	T	exonic	ANKRD27	NA	synonymous SNV	ANKRD27:NM_032139:exon11:c.G969A:p.T323T	exonic	ENSG00000105186	NA	synonymous SNV	ENSG00000105186:ENST00000591100:exon2:c.G51A:p.T17T,ENSG00000105186:ENST00000306065:exon11:c.G969A:p.T323T,ENSG00000105186:ENST00000587352:exon11:c.G969A:p.T323T	Score=536;Name=lod=202	NA	19q13.11	NA	NA	NA	NA	rs10410241	0.06	0.06	0.074	0.0748802	0.001	NA	0.0173	0.2738	NA	NA	NA	0.02	0.25	0.0209	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.349288	NA	NA	0.000349	0.218566	NA	0.08	NA	6.6444176
988	17	76168080	76168080	G	C	UTR3	SYNGR2	NM_004710:c.*63G>C	NA	NA	exonic	ENSG00000108639	NA	stoploss	ENSG00000108639:ENST00000588282:exon3:c.G827C:p.X276S	NA	NA	17q25.3	NA	Name=Pol2	NA	NA	rs143144653	0.01	0.01	0.011	0.00559105	0.0149	NA	0.013	0.0008	0.0031	0.01	NA	0.02	0.002	0.0079	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.212391	NA	NA	NA	NA	NA	0.007	NA	6.6438667
988	2	100055506	100055506	A	G	exonic	REV1	NA	nonsynonymous SNV	REV1:NM_001037872:exon6:c.T770C:p.F257S,REV1:NM_016316:exon6:c.T770C:p.F257S	exonic	ENSG00000135945	NA	nonsynonymous SNV	ENSG00000135945:ENST00000258428:exon6:c.T770C:p.F257S,ENSG00000135945:ENST00000393445:exon6:c.T770C:p.F257S	NA	NA	2q11.2	NA	NA	Name=2	NA	rs3087386	0.57	0.57	0.551	0.580272	0.5666	0.3611	0.7003	0.7315	0.5307	0.58	0.36	0.7	0.72	0.5755	0.72	0.78	T	0.0	B	0.0	B	0.957	N	1.000	P	-1.39	N	1.8	T	-0.979	T	0.000	T	0.064	-0.782	0.727	-0.027	-0.622	0.717	6.440	-0.781505	NA	0.53	0.547442	0.70699	NA	0.536	NA	6.6437914
988	19	3661916	3661916	G	A	exonic	PIP5K1C	NA	synonymous SNV	PIP5K1C:NM_001195733:exon4:c.C303T:p.D101D,PIP5K1C:NM_012398:exon4:c.C303T:p.D101D	exonic	ENSG00000186111	NA	synonymous SNV	ENSG00000186111:ENST00000335312:exon4:c.C303T:p.D101D,ENSG00000186111:ENST00000537021:exon4:c.C303T:p.D101D,ENSG00000186111:ENST00000539785:exon4:c.C303T:p.D101D,ENSG00000186111:ENST00000589578:exon4:c.C303T:p.D101D	Score=606;Name=lod=388	NA	19p13.3	NA	NA	NA	NA	rs115136413	0.0046	0.0046	0.008	0.00219649	0.0089	NA	0.0014	NA	0.001	0.01	NA	0.0028	NA	0.0059	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.17103	NA	NA	0.008256	0.001589	NA	NA	NA	6.6436106
988	1	197031021	197031021	C	T	exonic	F13B	NA	nonsynonymous SNV	F13B:NM_001994:exon3:c.G344A:p.R115H	exonic	ENSG00000143278	NA	nonsynonymous SNV	ENSG00000143278:ENST00000367412:exon3:c.G344A:p.R115H	NA	NA	1q31.3	Score=775;Name=V$PAX5_02	NA	NA	NA	rs6003	0.81	0.81	0.78	0.761781	0.9115	0.9831	0.879	0.3162	0.8988	0.92	0.99	0.9	0.35	0.872	0.99	0.22	T	0.0	B	0.002	B	0.781	N	1.000	P	0.345	N	-0.18	T	-1.024	T	0.000	T	0.138	-1.169	0.09	-0.818	-0.151	-0.455	4.868	-1.16915	NA	0.32	0.907093	0.409442	NA	0.703	CLINSIG=other;CLNDBN=Venous_thrombosis\x2c_susceptibility_to;CLNREVSTAT=single;CLNACC=RCV000017984.1;CLNDSDB=.;CLNDSDBID=.	6.6427404
988	12	120636549	120636549	C	A	intronic	RPLP0	NA	NA	NA	exonic	ENSG00000089157	NA	nonsynonymous SNV	ENSG00000089157:ENST00000547173:exon5:c.G490T:p.G164C,ENSG00000089157:ENST00000551258:exon6:c.G449T:p.W150L	NA	NA	12q24.23	NA	Name=Pol2,Pol2(b),Pol2-4H8,HEY1	Name=5	NA	rs2074540	0.34	0.34	0.328	0.326278	0.1531	0.5625	0.1441	0.4539	0.2178	0.16	0.57	0.17	0.46	0.2216	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.06613	2.06613	NA	0.150349	0.417839	NA	0.203	NA	6.6416177
988	2	113309473	113309473	C	T	exonic	POLR1B	NA	nonsynonymous SNV	POLR1B:NM_001137604:exon5:c.C716T:p.S239L,POLR1B:NM_019014:exon6:c.C884T:p.S295L	exonic	ENSG00000125630	NA	nonsynonymous SNV	ENSG00000125630:ENST00000537335:exon3:c.C251T:p.S84L,ENSG00000125630:ENST00000417433:exon5:c.C716T:p.S239L,ENSG00000125630:ENST00000263331:exon6:c.C884T:p.S295L,ENSG00000125630:ENST00000409894:exon6:c.C884T:p.S295L,ENSG00000125630:ENST00000541869:exon7:c.C998T:p.S333L	NA	NA	2q13	NA	NA	NA	NA	rs1545133	0.46	0.46	0.458	0.448283	0.5726	0.4028	0.5014	0.3449	0.4693	0.56	0.35	0.54	0.36	0.5229	0.6	0.6	T	0.01	B	0.006	B	0.714	N	1.000	P	-0.255	N	0.04	T	-0.931	T	0.000	T	0.071	1.144	9.66	-2.63	-0.479	-0.090	5.574	1.143968	NA	0.65	0.596395	0.417158	NA	0.529	NA	6.6414384
988	16	5139186	5139186	G	C	exonic	FAM86A	NA	nonsynonymous SNV	FAM86A:NM_201598:exon6:c.C712G:p.H238D,FAM86A:NM_201400:exon7:c.C814G:p.H272D	exonic	ENSG00000118894	NA	nonsynonymous SNV	ENSG00000118894:ENST00000587133:exon5:c.C631G:p.H211D,ENSG00000118894:ENST00000458008:exon6:c.C712G:p.H238D,ENSG00000118894:ENST00000427587:exon7:c.C814G:p.H272D	NA	NA	16p13.3	NA	NA	NA	NA	rs12928528	0.47	0.47	0.391	0.434505	0.5895	0.5833	0.464	0.0703	0.593	0.59	0.6	0.51	0.12	0.5327	0.6	0.71	T	0.0	B	0.002	B	0.272	N	1.000	P	-0.405	N	2.38	T	-0.944	T	0.000	T	0.037	-2.915	0.001	-2.01	-0.443	-0.600	2.762	-2.915346	NA	0.86	0.57003	0.157019	ID=COSM435375;OCCURENCE=1(breast)	0.101	NA	6.6411034
988	11	44286566	44286566	G	A	exonic	ALX4	NA	synonymous SNV	ALX4:NM_021926:exon4:c.C1074T:p.H358H	exonic	ENSG00000052850	NA	synonymous SNV	ENSG00000052850:ENST00000329255:exon4:c.C1074T:p.H358H	Score=559;Name=lod=250	NA	11p11.2	Score=953;Name=V$USF_Q6	NA	NA	NA	rs3802805	0.36	0.36	0.329	0.358427	0.334	0.5258	0.5202	0.1248	0.4121	0.33	0.51	0.51	0.14	0.3618	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.370327	1.370327	NA	0.330077	0.166364	ID=COSM1178421;OCCURENCE=1(prostate)	0.391	NA	6.6407896
988	15	31793930	31793930	A	G	exonic	OTUD7A	NA	synonymous SNV	OTUD7A:NM_130901:exon8:c.T1113C:p.L371L	exonic	ENSG00000169918	NA	synonymous SNV	ENSG00000169918:ENST00000307050:exon8:c.T1113C:p.L371L,ENSG00000169918:ENST00000382902:exon8:c.T1134C:p.L378L	NA	Name=Venous thromboembolism	15q13.3	Score=762;Name=V$MIF1_01	NA	NA	NA	rs7164569	0.35	0.35	0.373	0.330871	0.339	0.2212	0.3429	0.5061	0.1902	0.35	0.23	0.38	0.49	0.3349	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.743618	NA	NA	0.352093	0.472298	NA	0.449	NA	6.6406736
988	15	41227149	41227149	T	C	exonic	DLL4	NA	synonymous SNV	DLL4:NM_019074:exon8:c.T1074C:p.H358H	exonic	ENSG00000128917	NA	synonymous SNV	ENSG00000128917:ENST00000249749:exon8:c.T1074C:p.H358H	Score=482;Name=lod=121	NA	15q15.1	NA	NA	NA	NA	rs28568593	0.02	0.02	0.012	0.0115815	0.007	NA	0.0144	0.0303	0.001	0.01	NA	0.02	0.05	0.01	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.126345	NA	NA	0.009128	0.024225	NA	0.014	NA	6.6405386
988	10	49414953	49414953	G	A	exonic	FRMPD2	NA	synonymous SNV	FRMPD2:NM_001018071:exon14:c.C1635T:p.Y545Y	exonic	ENSG00000170324	NA	synonymous SNV	ENSG00000170324:ENST00000305531:exon12:c.C1560T:p.Y520Y,ENSG00000170324:ENST00000407470:exon13:c.C1539T:p.Y513Y,ENSG00000170324:ENST00000374201:exon14:c.C1635T:p.Y545Y	Score=401;Name=lod=57	NA	10q11.22	NA	NA	NA	NA	rs74133708	0.04	0.04	0.048	0.0535144	0.005	NA	0.0259	0.1853	NA	0.01	NA	0.03	0.17	0.0176	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.066847	NA	NA	0.003837	0.160236	NA	0.072	NA	6.6402296
988	14	104481083	104481083	T	C	exonic	TDRD9	NA	synonymous SNV	TDRD9:NM_153046:exon21:c.T2128C:p.L710L	exonic	ENSG00000156414	NA	synonymous SNV	ENSG00000156414:ENST00000339063:exon21:c.T2128C:p.L710L,ENSG00000156414:ENST00000409874:exon21:c.T2128C:p.L710L	NA	NA	14q32.33	NA	NA	NA	NA	rs11160779	0.32	0.32	0.308	0.320288	0.3479	0.3393	0.3444	0.2769	0.3139	0.35	0.33	0.31	0.27	0.3428	0.35	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.018	T	0.000	T	.	-0.106	3.482	-3.15	-0.934	-0.448	14.785	-0.105587	NA	NA	0.335814	0.300272	ID=COSM147852,COSM147853;OCCURENCE=1(stomach)	0.304	NA	6.6401526
988	12	53072370	53072370	C	T	exonic	KRT1	NA	synonymous SNV	KRT1:NM_006121:exon2:c.G762A:p.S254S	exonic	ENSG00000167768	NA	synonymous SNV	ENSG00000167768:ENST00000252244:exon2:c.G762A:p.S254S	NA	NA	12q13.13	Score=789;Name=V$PAX6_01	NA	NA	NA	rs2741155	0.0023	0.0023	0.002	0.00279553	0.0089	NA	0.0043	0.0015	NA	0.004	NA	0.0028	0.002	0.0051	0.013	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.144292	NA	NA	0.012791	0.002951	ID=COSM940811;OCCURENCE=1(endometrium)	NA	NA	6.6398756
988	11	71515656	71515656	C	T	ncRNA_intronic	ALG1L9P	NA	NA	NA	ncRNA_exonic	ENSG00000254978	NA	NA	NA	Score=462;Name=lod=101	NA	11q13.4	NA	NA	Name=3	NA	rs113779704	0.01	0.01	0.013	0.0091853	0.0268	NA	0.0187	0.0023	0.0031	0.02	NA	0.02	0.002	NA	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.416087	NA	NA	NA	NA	NA	0.022	NA	6.6398666
988	3	120121656	120121656	G	A	exonic	FSTL1	NA	synonymous SNV	FSTL1:NM_007085:exon9:c.C804T:p.D268D	exonic	ENSG00000163430	NA	synonymous SNV	ENSG00000163430:ENST00000424703:exon8:c.C699T:p.D233D,ENSG00000163430:ENST00000295633:exon9:c.C804T:p.D268D	NA	NA	3q13.33	Score=777;Name=V$PAX2_01	NA	NA	NA	rs139355917	0.0037	0.0037	0.003	0.00239617	0.0099	NA	0.0014	0.0008	NA	0.01	NA	NA	NA	0.0083	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.539513	NA	NA	0.008837	0.00227	NA	NA	NA	6.6396296
988	17	41234470	41234470	A	G	exonic	BRCA1	NA	synonymous SNV	BRCA1:NM_007297:exon11:c.T4167C:p.S1389S,BRCA1:NM_007298:exon11:c.T999C:p.S333S,BRCA1:NM_007294:exon12:c.T4308C:p.S1436S,BRCA1:NM_007299:exon12:c.T999C:p.S333S,BRCA1:NM_007300:exon12:c.T4308C:p.S1436S	exonic	ENSG00000012048	NA	synonymous SNV	ENSG00000012048:ENST00000484087:exon6:c.T621C:p.S207S,ENSG00000012048:ENST00000487825:exon6:c.T624C:p.S208S,ENSG00000012048:ENST00000351666:exon8:c.T759C:p.S253S,ENSG00000012048:ENST00000309486:exon11:c.T3420C:p.S1140S,ENSG00000012048:ENST00000352993:exon11:c.T882C:p.S294S,ENSG00000012048:ENST00000493795:exon11:c.T4167C:p.S1389S,ENSG00000012048:ENST00000493919:exon11:c.T858C:p.S286S,ENSG00000012048:ENST00000346315:exon12:c.T4308C:p.S1436S,ENSG00000012048:ENST00000354071:exon12:c.T4308C:p.S1436S,ENSG00000012048:ENST00000357654:exon12:c.T4308C:p.S1436S,ENSG00000012048:ENST00000468300:exon12:c.T999C:p.S333S,ENSG00000012048:ENST00000471181:exon12:c.T4308C:p.S1436S,ENSG00000012048:ENST00000478531:exon12:c.T996C:p.S332S,ENSG00000012048:ENST00000491747:exon12:c.T999C:p.S333S	NA	NA	17q21.31	NA	NA	NA	NA	rs1060915	0.3	0.3	0.271	0.336262	0.3579	0.371	0.3646	0.1596	0.4969	0.36	0.33	0.38	0.13	0.3431	0.38	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.931	T	0.000	T	.	0.567	7.064	0.257	0.129	-0.119	2.947	0.566994	NA	NA	0.326047	0.188833	NA	0.254	CLINSIG=non-pathogenic|untested|non-pathogenic|non-pathogenic;CLNDBN=Breast-ovarian_cancer\x2c_familial_1|Familial_cancer_of_breast|not_provided|Neoplastic_Syndromes\x2c_Hereditary;CLNREVSTAT=mult|not|single|single;CLNACC=RCV000112313.2|RCV000114988.1|RCV000123918.1|RCV000128938.1;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet|GeneReviews:MedGen:OMIM:SNOMED_CT|.|MedGen;CLNDSDBID=NBK1247:C2676676:604370:ORPHA145|NBK1247:C0346153:114480:254843006|.|C0027672	6.6396196
988	12	81205379	81205379	G	T	exonic	LIN7A	NA	synonymous SNV	LIN7A:NM_004664:exon5:c.C567A:p.T189T	exonic	ENSG00000111052	NA	synonymous SNV	ENSG00000111052:ENST00000552864:exon5:c.C567A:p.T189T	Score=647;Name=lod=566	NA	12q21.31	NA	NA	NA	NA	rs73137257	0.0041	0.0041	0.001	0.00219649	0.0089	NA	0.0014	NA	0.001	0.01	NA	0.0028	NA	0.008	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.255326	1.255326	NA	0.010349	0.003177	NA	0.007	NA	6.6394176
988	4	1985587	1985587	G	A	exonic	NELFA	NA	synonymous SNV	NELFA:NM_005663:exon9:c.C1323T:p.N441N	exonic	ENSG00000185049	NA	synonymous SNV	ENSG00000185049:ENST00000542778:exon8:c.C885T:p.N295N,ENSG00000185049:ENST00000382882:exon9:c.C1323T:p.N441N,ENSG00000185049:ENST00000411638:exon9:c.C1290T:p.N430N,ENSG00000185049:ENST00000416258:exon9:c.C1302T:p.N434N	Score=552;Name=lod=233	NA	4p16.3	NA	NA	NA	NA	rs1139902	0.01	0.01	NA	0.00399361	0.007	NA	0.0086	0.003	0.0031	0.01	NA	0.02	0.01	0.0081	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.055189	NA	NA	0.012209	0.001135	NA	NA	NA	6.6393576
988	5	176314459	176314459	G	A	exonic	HK3	NA	synonymous SNV	HK3:NM_002115:exon11:c.C1593T:p.D531D	exonic	ENSG00000160883	NA	synonymous SNV	ENSG00000160883:ENST00000292432:exon11:c.C1593T:p.D531D	Score=410;Name=lod=62	NA	5q35.2	Score=766;Name=V$YY1_02	NA	NA	NA	rs2278492	0.33	0.33	0.309	0.333267	0.327	0.3948	0.4452	0.1793	0.4049	0.34	0.38	0.46	0.19	0.3584	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.358985	NA	NA	0.341977	0.221062	NA	0.341	NA	6.6392896
988	19	11105608	11105608	T	C	exonic	SMARCA4	NA	synonymous SNV	SMARCA4:NM_001128845:exon8:c.T1524C:p.H508H,SMARCA4:NM_001128846:exon8:c.T1524C:p.H508H,SMARCA4:NM_001128847:exon8:c.T1524C:p.H508H,SMARCA4:NM_001128848:exon8:c.T1524C:p.H508H,SMARCA4:NM_001128849:exon9:c.T1524C:p.H508H,SMARCA4:NM_003072:exon9:c.T1524C:p.H508H,SMARCA4:NM_001128844:exon10:c.T1524C:p.H508H	exonic	ENSG00000127616	NA	synonymous SNV	ENSG00000127616:ENST00000413806:exon8:c.T1524C:p.H508H,ENSG00000127616:ENST00000450717:exon8:c.T1524C:p.H508H,ENSG00000127616:ENST00000344626:exon9:c.T1524C:p.H508H,ENSG00000127616:ENST00000358026:exon9:c.T1524C:p.H508H,ENSG00000127616:ENST00000590574:exon9:c.T1524C:p.H508H,ENSG00000127616:ENST00000429416:exon10:c.T1524C:p.H508H,ENSG00000127616:ENST00000444061:exon10:c.T1524C:p.H508H,ENSG00000127616:ENST00000541122:exon10:c.T1524C:p.H508H,ENSG00000127616:ENST00000589677:exon10:c.T1524C:p.H508H	Score=461;Name=lod=100	NA	19p13.2	NA	NA	NA	NA	rs7935	0.31	0.31	0.312	0.311502	0.3519	0.2639	0.2133	0.3109	0.3896	0.35	0.26	0.28	0.33	0.3353	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.874355	NA	NA	0.34093	0.303677	NA	0.268	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000114302.1;CLNDSDB=.;CLNDSDBID=.	6.6385366
988	11	1628992	1628992	G	A	exonic	KRTAP5-3	NA	synonymous SNV	KRTAP5-3:NM_001012708:exon1:c.C624T:p.G208G	exonic	ENSG00000196224	NA	synonymous SNV	ENSG00000196224:ENST00000399685:exon1:c.C624T:p.G208G	Score=300;Name=lod=22	NA	11p15.5	NA	NA	Name=7	NA	rs60210378	0.44	0.44	0.49	0.461062	0.5239	0.3879	0.4467	0.4939	0.4376	0.49	0.37	0.41	0.46	0.5048	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.16434	NA	NA	NA	NA	NA	0.043	NA	6.6379666
988	6	44151490	44151490	G	A	exonic	CAPN11	NA	nonsynonymous SNV	CAPN11:NM_007058:exon22:c.G2183A:p.S728N	exonic	ENSG00000137225	NA	nonsynonymous SNV	ENSG00000137225:ENST00000398776:exon22:c.G2183A:p.S728N,ENSG00000137225:ENST00000542245:exon22:c.G2183A:p.S728N	NA	NA	6p21.1	NA	NA	NA	NA	rs7761137	0.24	0.24	0.258	0.273363	0.2256	0.0099	0.232	0.5862	0.2004	0.22	0.0035	0.24	0.56	0.2368	0.56	1	T	0.0	B	0.0	B	0.522	N	1.000	P	-0.53	N	1.55	T	-0.930	T	0.007	T	0.017	-0.336	2.406	1.82	0.082	0.549	4.480	-0.336407	NA	1	0.233012	0.501031	NA	0.275	NA	6.6379214
988	1	245865810	245865810	C	T	exonic	KIF26B	NA	synonymous SNV	KIF26B:NM_018012:exon15:c.C6229T:p.L2077L	exonic	ENSG00000162849	NA	synonymous SNV	ENSG00000162849:ENST00000366518:exon12:c.C5086T:p.L1696L,ENSG00000162849:ENST00000407071:exon15:c.C6229T:p.L2077L	Score=548;Name=lod=224	NA	1q44	NA	NA	NA	NA	rs61734433	0.0041	0.0041	0.005	0.00279553	0.0119	NA	NA	NA	0.002	0.01	NA	NA	NA	0.0068	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.728468	NA	NA	0.010117	0.001924	NA	NA	NA	6.6378496
989	1	100736221	100736221	C	T	exonic	RTCA	NA	synonymous SNV	RTCA:NM_003729:exon4:c.C399T:p.I133I,RTCA:NM_001130841:exon5:c.C438T:p.I146I	exonic	ENSG00000137996	NA	synonymous SNV	ENSG00000137996:ENST00000370128:exon4:c.C399T:p.I133I,ENSG00000137996:ENST00000260563:exon5:c.C438T:p.I146I	NA	NA	1p21.2	Score=872;Name=V$CDP_02	NA	NA	NA	rs77300480	0.01	0.01	0.002	0.00299521	0.0109	NA	0.0043	NA	0.001	0.01	NA	0.01	NA	0.0099	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.324583	NA	NA	0.011163	0.001135	NA	0.007	NA	6.6347036
989	14	22392807	22392807	T	C	intergenic	OR4E2,DAD1	dist=258569;dist=641000	NA	NA	exonic	ENSG00000211792	NA	synonymous SNV	ENSG00000211792:ENST00000390440:exon2:c.T330C:p.Y110Y	Score=363;Name=lod=40	NA	14q11.2	NA	Name=CTCF_(SC-5916),CTCF,EBF1_(C-8)	Name=21	NA	rs8008040	0.26	0.26	0.269	0.242013	0.2913	0.2619	0.3761	0.0991	0.2689	0.32	0.28	0.33	0.11	0.2908	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.795786	NA	NA	0.283976	0.127236	NA	0.268	NA	6.633924
989	4	91230149	91230149	A	G	exonic	CCSER1	NA	synonymous SNV	CCSER1:NM_001145065:exon2:c.A714G:p.A238A,CCSER1:NM_207491:exon2:c.A714G:p.A238A	exonic	ENSG00000184305	NA	synonymous SNV	ENSG00000184305:ENST00000333691:exon2:c.A714G:p.A238A,ENSG00000184305:ENST00000432775:exon2:c.A714G:p.A238A,ENSG00000184305:ENST00000505073:exon2:c.A714G:p.A238A,ENSG00000184305:ENST00000509176:exon2:c.A714G:p.A238A	NA	NA	4q22.1	Score=903;Name=V$ELK1_01	NA	NA	NA	rs146032287	0.01	0.01	0.003	0.00499201	0.0109	NA	0.013	NA	0.0051	0.01	NA	0.01	NA	0.0103	0.013	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.791898	NA	NA	0.012664	0.0016	NA	NA	NA	6.6328026
989	9	107581949	107581949	A	C	exonic	ABCA1	NA	synonymous SNV	ABCA1:NM_005502:exon22:c.T3159G:p.V1053V	exonic	ENSG00000165029	NA	synonymous SNV	ENSG00000165029:ENST00000374736:exon22:c.T3159G:p.V1053V	Score=566;Name=lod=267	NA	9q31.1	NA	NA	NA	NA	rs35871586	0.01	0.01	0.005	0.00419329	0.0159	NA	0.0058	NA	0.001	0.02	NA	0.01	NA	0.0076	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.350815	1.350815	NA	0.010465	0.002724	NA	NA	NA	6.6327016
989	12	70004259	70004259	G	A	exonic	LRRC10	NA	synonymous SNV	LRRC10:NM_201550:exon1:c.C360T:p.L120L	exonic	ENSG00000198812	NA	synonymous SNV	ENSG00000198812:ENST00000361484:exon1:c.C360T:p.L120L	Score=549;Name=lod=227	NA	12q15	NA	NA	NA	NA	rs145823585	0.01	0.01	0.007	0.00419329	0.0159	NA	0.0058	NA	0.001	0.01	NA	0.01	0.002	0.0073	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.901714	NA	NA	0.011395	0.001135	NA	NA	NA	6.6320716
989	3	9986104	9986104	G	A	exonic	CRELD1	NA	synonymous SNV	CRELD1:NM_015513:exon10:c.G1104A:p.Q368Q,CRELD1:NM_001077415:exon11:c.G1104A:p.Q368Q	exonic	ENSG00000163703	NA	synonymous SNV	ENSG00000163703:ENST00000383811:exon10:c.G1104A:p.Q368Q,ENSG00000163703:ENST00000397170:exon11:c.G1104A:p.Q368Q,ENSG00000163703:ENST00000452070:exon11:c.G1104A:p.Q368Q	Score=584;Name=lod=315	NA	3p25.3	NA	NA	NA	NA	rs114286445	0.01	0.01	0.005	0.00339457	0.0129	NA	0.0058	NA	NA	0.02	NA	0.01	NA	0.0087	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.029031	NA	NA	0.013023	0.002724	NA	NA	NA	6.6320436
989	1	161495117	161495117	C	T	exonic	HSPA6	NA	synonymous SNV	HSPA6:NM_002155:exon1:c.C669T:p.A223A	exonic	ENSG00000173110	NA	synonymous SNV	ENSG00000173110:ENST00000309758:exon1:c.C669T:p.A223A	Score=631;Name=lod=491	NA	1q23.3	NA	NA	NA	NA	rs41297716	0.02	0.02	0.009	0.0173722	0.0099	0.0099	0.0548	0.0136	0.0112	0.01	0.02	0.02	0.02	0.0172	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.369571	NA	NA	0.008256	0.01271	NA	0.007	NA	6.6313106
989	6	32557435	32557435	A	C	exonic	HLA-DRB1	NA	nonsynonymous SNV	HLA-DRB1:NM_002124:exon1:c.T85G:p.S29A	exonic	ENSG00000196126	NA	nonsynonymous SNV	ENSG00000196126:ENST00000360004:exon1:c.T85G:p.S29A	NA	NA	6p21.32	NA	Name=BCL3,ZEB1_(SC-25388),NFKB,PAX5-N19,p300,ZBTB33,Pol2,YY1,BCLAF1_(M33-P5B11),YY1_(C-20),Sin3Ak-20,Pol2-4H8	NA	NA	rs9270299	0.78	0.78	0.731	0.852236	0.8767	0.8373	0.9337	0.8737	0.7556	0.77	0.8	0.83	0.71	0.8263	0.83	1	T	0.0	B	0.0	B	0.091	N	1.000	P	.	.	8.44	T	-0.979	T	0.000	T	0.326	-2.471	0.003	0.526	-0.353	0.026	3.093	-2.470646	NA	1	NA	NA	NA	0.014	NA	6.6303334
989	6	7584617	7584617	C	T	exonic	DSP	NA	synonymous SNV	DSP:NM_001008844:exon24:c.C5325T:p.T1775T,DSP:NM_004415:exon24:c.C7122T:p.T2374T	exonic	ENSG00000096696	NA	synonymous SNV	ENSG00000096696:ENST00000379802:exon24:c.C7122T:p.T2374T,ENSG00000096696:ENST00000418664:exon24:c.C5325T:p.T1775T	NA	NA	6p24.3	Score=910;Name=V$MYB_Q6	NA	NA	NA	rs2076300	0.23	0.23	0.223	0.211661	0.3797	0.0744	0.2421	0.1369	0.2597	0.38	0.06	0.28	0.15	0.2881	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.416674	NA	NA	0.368953	0.172038	ID=COSM150043;OCCURENCE=1(stomach)	0.268	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000038083.1;CLNDSDB=.;CLNDSDBID=.	6.6299136
989	19	17091368	17091368	T	G	exonic	CPAMD8	NA	synonymous SNV	CPAMD8:NM_015692:exon14:c.A1665C:p.R555R	exonic	ENSG00000160111	NA	synonymous SNV	ENSG00000160111:ENST00000443236:exon14:c.A1665C:p.R555R	Score=371;Name=lod=43	NA	19p13.11	NA	NA	NA	NA	rs8103646	0.47	0.47	0.486	0.473842	0.3509	0.5506	0.3559	0.6475	0.3701	0.36	0.55	0.37	0.64	0.3693	0.64	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.938	T	0.000	T	.	0.564	7.048	0.633	0.105	-0.114	7.174	0.563842	NA	NA	0.316903	0.568101	NA	0.261	NA	6.6295636
989	19	52537576	52537576	T	G	exonic	ZNF432	NA	synonymous SNV	ZNF432:NM_014650:exon5:c.A1356C:p.T452T	exonic	ENSG00000256087	NA	synonymous SNV	ENSG00000256087:ENST00000221315:exon5:c.A1356C:p.T452T,ENSG00000256087:ENST00000594154:exon5:c.A1356C:p.T452T	Score=420;Name=lod=68	NA	19q13.41	NA	Name=KAP1,SETDB1,ZNF274	NA	NA	rs11666149	0.49	0.49	0.492	0.560503	0.3131	0.5228	0.4697	0.7587	0.6503	0.32	0.53	0.44	0.77	0.4195	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.620126	NA	NA	0.304535	0.713118	ID=COSM148715;OCCURENCE=1(stomach)	0.514	NA	6.6295316
989	9	4286255	4286255	G	A	exonic	GLIS3	NA	synonymous SNV	GLIS3:NM_001042413:exon2:c.C171T:p.N57N	exonic	ENSG00000107249	NA	synonymous SNV	ENSG00000107249:ENST00000381971:exon2:c.C171T:p.N57N,ENSG00000107249:ENST00000477901:exon2:c.C171T:p.N57N,ENSG00000107249:ENST00000481827:exon2:c.C171T:p.N57N,ENSG00000107249:ENST00000491889:exon2:c.C171T:p.N57N	Score=492;Name=lod=133	NA	9p24.2	NA	NA	NA	NA	rs117802495	0.01	0.01	0.004	0.00439297	0.0159	NA	0.0072	0.0008	NA	0.02	NA	0.01	NA	0.0091	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.847678	NA	NA	0.012204	0.001435	NA	NA	NA	6.6294626
989	3	9798773	9798773	C	G	exonic	OGG1	NA	nonsynonymous SNV	OGG1:NM_002542:exon7:c.C977G:p.S326C,OGG1:NM_016820:exon7:c.C994G:p.P332A	exonic	ENSG00000114026	NA	nonsynonymous SNV	ENSG00000114026:ENST00000302003:exon7:c.C994G:p.P332A,ENSG00000114026:ENST00000344629:exon7:c.C977G:p.S326C	NA	NA	3p25.3	NA	NA	NA	NA	rs1052133	0.3	0.3	0.271	0.302117	0.2028	0.5476	0.2939	0.1551	0.3558	0.2	0.54	0.3	0.16	0.2721	0.54	0.79	T	0.245	B	0.138	B	.	.	1.000	P	1.24	L	0.26	T	-0.903	T	0.000	T	0.138	0.047	4.259	-1.32	-0.141	0.037	3.561	0.047094	NA	0.01	0.230116	0.174081	NA	0.275	NA	6.6283174
989	6	46802316	46802316	G	A	exonic	MEP1A	NA	synonymous SNV	MEP1A:NM_005588:exon12:c.G1611A:p.A537A	exonic	ENSG00000112818	NA	synonymous SNV	ENSG00000112818:ENST00000230588:exon12:c.G1611A:p.A537A	NA	NA	6p12.3	Score=906;Name=V$TATA_01	NA	NA	NA	rs114825458	0.01	0.01	0.005	0.00499201	0.0109	NA	0.0101	0.0023	0.0041	0.01	NA	0.01	0.002	0.0106	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.585371	NA	NA	0.017326	0.004312	NA	0.014	NA	6.6278406
989	8	123964767	123964767	G	A	exonic	ZHX2	NA	synonymous SNV	ZHX2:NM_014943:exon3:c.G1017A:p.Q339Q	exonic	ENSG00000178764	NA	synonymous SNV	ENSG00000178764:ENST00000314393:exon3:c.G1017A:p.Q339Q	Score=432;Name=lod=76	NA	8q24.13	NA	NA	NA	NA	rs16897795	0.02	0.02	0.007	0.0191693	0.008	0.0317	0.0519	0.0023	0.0174	0.01	0.03	0.06	0.0041	0.0247	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.100609	NA	NA	0.006279	0.001589	NA	0.022	NA	6.6276876
989	8	123966114	123966114	G	A	exonic	ZHX2	NA	synonymous SNV	ZHX2:NM_014943:exon3:c.G2364A:p.S788S	exonic	ENSG00000178764	NA	synonymous SNV	ENSG00000178764:ENST00000314393:exon3:c.G2364A:p.S788S	NA	NA	8q24.13	NA	NA	Name=2	NA	rs12548759	0.02	0.02	0.012	0.0191693	0.008	0.0317	0.0519	0.0023	0.0174	0.01	0.03	0.06	0.0041	0.0247	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.364874	NA	NA	0.006279	0.001589	NA	0.022	NA	6.6276876
989	8	123964038	123964038	T	C	exonic	ZHX2	NA	synonymous SNV	ZHX2:NM_014943:exon3:c.T288C:p.H96H	exonic	ENSG00000178764	NA	synonymous SNV	ENSG00000178764:ENST00000534247:exon2:c.T288C:p.H96H,ENSG00000178764:ENST00000314393:exon3:c.T288C:p.H96H	Score=513;Name=lod=162	NA	8q24.13	NA	NA	NA	NA	rs4871332	0.02	0.02	0.008	0.0191693	0.008	0.0317	0.0519	0.0023	0.0174	0.01	0.03	0.06	0.0041	0.0248	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.032035	NA	NA	0.006279	0.001589	NA	0.022	NA	6.6275876
989	17	46629232	46629232	G	A	intronic	HOXB3	NA	NA	NA	ncRNA_intronic	ENSG00000233101	NA	NA	NA	Score=313;Name=lod=25	NA	17q21.32	Score=937;Name=V$COUP_01	Name=SUZ12	NA	NA	rs890432	0.65	0.65	0.676	0.598642	0.7058	0.7966	0.6571	0.3411	0.591	0.71	0.83	0.66	0.35	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.417031	1.417031	NA	NA	NA	NA	0.609	NA	6.6275333
989	9	109688482	109688482	A	G	exonic	ZNF462	NA	synonymous SNV	ZNF462:NM_021224:exon3:c.A2289G:p.R763R	exonic	ENSG00000148143	NA	synonymous SNV	ENSG00000148143:ENST00000277225:exon3:c.A2289G:p.R763R,ENSG00000148143:ENST00000457913:exon3:c.A2289G:p.R763R	Score=325;Name=lod=28	NA	9q31.2	NA	NA	NA	NA	rs72741799	0.01	0.01	0.006	0.00579073	0.0209	NA	0.0101	0.0008	NA	0.02	NA	0.02	NA	0.0079	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.040615	NA	NA	0.011047	0.002043	NA	0.007	NA	6.6268196
989	3	3170857	3170857	C	T	exonic	TRNT1	NA	synonymous SNV	TRNT1:NM_182916:exon2:c.C133T:p.L45L	exonic	ENSG00000072756	NA	synonymous SNV	ENSG00000072756:ENST00000397779:exon1:c.C133T:p.L45L,ENSG00000072756:ENST00000251607:exon2:c.C133T:p.L45L,ENSG00000072756:ENST00000280591:exon2:c.C133T:p.L45L,ENSG00000072756:ENST00000339437:exon2:c.C133T:p.L45L,ENSG00000072756:ENST00000402675:exon2:c.C133T:p.L45L,ENSG00000072756:ENST00000413000:exon2:c.C133T:p.L45L,ENSG00000072756:ENST00000434583:exon2:c.C133T:p.L45L,ENSG00000072756:ENST00000420393:exon3:c.C133T:p.L45L	Score=482;Name=lod=121	NA	3p26.2	NA	NA	NA	NA	rs75033443	0.04	0.04	0.051	0.0359425	0.0169	NA	0.013	0.1165	NA	0.01	NA	0.02	0.15	0.0137	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.015425	NA	NA	0.009767	0.085792	NA	0.036	NA	6.6262996
989	14	65197791	65197791	C	A	exonic	PLEKHG3	NA	synonymous SNV	PLEKHG3:NM_015549:exon5:c.C585A:p.G195G	exonic	ENSG00000126822	NA	synonymous SNV	ENSG00000126822:ENST00000247226:exon5:c.C585A:p.G195G,ENSG00000126822:ENST00000394691:exon7:c.C753A:p.G251G	Score=553;Name=lod=236	NA	14q23.3	NA	NA	NA	NA	rs61742295	0.03	0.03	0.03	0.0429313	0.0099	0.0357	0.0115	0.0787	0.0583	0.01	0.03	0.01	0.09	0.0222	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.883696	NA	NA	0.009186	0.069905	NA	0.065	NA	6.6253806
989	19	51628529	51628529	A	G	exonic	SIGLEC9	NA	nonsynonymous SNV	SIGLEC9:NM_001198558:exon1:c.A298G:p.K100E,SIGLEC9:NM_014441:exon1:c.A298G:p.K100E	exonic	ENSG00000129450	NA	nonsynonymous SNV	ENSG00000129450:ENST00000250360:exon1:c.A298G:p.K100E,ENSG00000129450:ENST00000440804:exon1:c.A298G:p.K100E	NA	NA	19q13.41	NA	NA	NA	NA	rs2075803	0.51	0.51	0.451	0.525958	0.5835	0.5734	0.464	0.3843	0.6534	0.58	0.55	0.49	0.35	0.557	0.58	0.22	T	0.076	B	0.094	B	0.929	N	1.000	P	1.675	L	-0.18	T	-0.919	T	0.000	T	0.027	0.053	4.291	0.721	-0.132	-1.309	5.692	0.053225	NA	0.23	0.567791	0.402406	NA	0.551	NA	6.6250424
990	13	34404912	34404912	A	G	exonic	RFC3	NA	synonymous SNV	RFC3:NM_002915:exon6:c.A630G:p.Q210Q,RFC3:NM_181558:exon6:c.A630G:p.Q210Q	exonic	ENSG00000133119	NA	synonymous SNV	ENSG00000133119:ENST00000380071:exon6:c.A630G:p.Q210Q,ENSG00000133119:ENST00000434425:exon6:c.A630G:p.Q210Q	Score=391;Name=lod=52	NA	13q13.2	NA	NA	NA	NA	rs1805376	0.03	0.03	0.018	0.0413339	0.0109	0.0327	0.0245	0.0643	0.0624	0.01	0.02	0.02	0.05	0.0225	0.066	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.264363	NA	NA	0.010465	0.065819	NA	0.036	NA	6.6228016
990	2	232196597	232196597	G	A	exonic	ARMC9	NA	synonymous SNV	ARMC9:NM_025139:exon20:c.G1866A:p.T622T	exonic	ENSG00000135931	NA	synonymous SNV	ENSG00000135931:ENST00000349938:exon20:c.G1866A:p.T622T	Score=485;Name=lod=125	NA	2q37.1	Score=717;Name=V$LUN1_01	NA	NA	NA	rs1669084	0.3	0.3	0.301	0.294329	0.3588	0.2222	0.3372	0.2761	0.2965	0.37	0.21	0.31	0.3	0.3409	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.174916	NA	NA	0.344767	0.280754	NA	0.384	NA	6.6221996
990	6	116360295	116360295	C	A	ncRNA_exonic	TPI1P3	NA	NA	NA	ncRNA_exonic	ENSG00000186743	NA	NA	NA	Score=627;Name=lod=470	NA	6q22.1	NA	Name=MafK_(ab50322)	NA	NA	rs75648305	0.02	0.02	0.013	0.0115815	0.0447	NA	0.0101	0.0045	NA	0.04	NA	0.01	0.0041	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.269919	NA	NA	NA	NA	NA	NA	NA	6.6219666
990	11	5475597	5475597	C	T	exonic	OR51I2	NA	synonymous SNV	OR51I2:NM_001004754:exon1:c.C879T:p.S293S	exonic	ENSG00000187918	NA	synonymous SNV	ENSG00000187918:ENST00000341449:exon1:c.C879T:p.S293S	Score=491;Name=lod=132	NA	11p15.4	Score=856;Name=V$EVI1_02	NA	NA	NA	rs11037503	0.21	0.21	0.196	0.171925	0.3718	0.0417	0.3012	0.0454	0.18	0.38	0.05	0.3	0.08	0.297	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.120915	NA	NA	0.376542	0.101772	NA	0.312	NA	6.6213246
990	6	111922503	111922503	G	C	ncRNA_exonic	TRAF3IP2-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000255389	NA	NA	NA	NA	NA	6q21	NA	Name=ZNF263	Name=37	NA	rs76228616	0.06	0.06	0.057	0.0625	0.0209	0.004	0.0764	0.1581	0.0266	0.03	0.01	0.09	0.14	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.533473	NA	NA	0.024513	0.140896	NA	0.029	NA	6.6212536
990	1	35919178	35919178	T	C	exonic	KIAA0319L	NA	synonymous SNV	KIAA0319L:NM_024874:exon12:c.A1893G:p.S631S	exonic	ENSG00000142687	NA	synonymous SNV	ENSG00000142687:ENST00000373266:exon3:c.A204G:p.S68S,ENSG00000142687:ENST00000325722:exon12:c.A1893G:p.S631S,ENSG00000142687:ENST00000426982:exon12:c.A1893G:p.S631S,ENSG00000142687:ENST00000440579:exon12:c.A1893G:p.S631S	NA	NA	1p34.3	NA	NA	Name=10	NA	rs16837364	0.04	0.04	0.038	0.0471246	0.0169	0.0188	0.0086	0.1256	0.0286	0.02	0.02	0.01	0.11	0.02	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.238016	NA	NA	0.008953	0.095552	NA	0.065	NA	6.6208136
990	1	21036265	21036265	C	T	exonic	KIF17	NA	synonymous SNV	KIF17:NM_001122819:exon4:c.G537A:p.V179V,KIF17:NM_020816:exon4:c.G537A:p.V179V	exonic	ENSG00000117245	NA	synonymous SNV	ENSG00000117245:ENST00000247986:exon4:c.G537A:p.V179V,ENSG00000117245:ENST00000375044:exon4:c.G237A:p.V79V,ENSG00000117245:ENST00000400463:exon4:c.G537A:p.V179V	Score=572;Name=lod=281	NA	1p36.12	NA	NA	NA	NA	rs33996125	0.01	0.01	NA	0.00539137	0.0139	NA	0.0101	0.0015	0.0041	0.01	NA	0.01	0.0041	0.013	0.019	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.431034	1.431034	NA	0.019302	0.004766	NA	0.014	NA	6.6204646
990	1	76107339	76107339	A	G	intergenic	SLC44A5,ACADM	dist=30540;dist=82704	NA	NA	ncRNA_exonic	ENSG00000230863	NA	NA	NA	Score=737;Name=lod=1315	NA	1p31.1	NA	Name=GATA3_(SC-268)	Name=6	NA	rs211716	0.6	0.6	0.607	0.616214	0.3797	0.9504	0.487	0.6309	0.5869	0.4	0.94	0.47	0.62	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.559159	NA	NA	NA	NA	NA	0.58	NA	6.6203
990	14	96157187	96157187	G	A	exonic	TCL1B	NA	nonsynonymous SNV	TCL1B:NM_004918:exon2:c.G277A:p.G93R	exonic	ENSG00000213231	NA	nonsynonymous SNV	ENSG00000213231:ENST00000340722:exon2:c.G277A:p.G93R	NA	NA	14q32.13	NA	NA	NA	NA	rs1064017	0.28	0.28	0.283	0.262181	0.4105	0.0873	0.3372	0.2413	0.2648	0.4	0.11	0.32	0.26	0.3571	0.45	0.91	T	0.946	P	0.347	B	.	.	1.000	P	1.445	L	1.67	T	-0.965	T	0.000	T	0.089	2.369	13.88	0.758	0.160	0.137	2.351	2.369441	2.369441	0.82	0.445581	0.29369	ID=COSM1371885;OCCURENCE=1(skin),1(large_intestine)	0.319	NA	6.6201524
990	13	25745098	25745098	G	C	exonic	AMER2	NA	synonymous SNV	AMER2:NM_152704:exon1:c.C660G:p.P220P,AMER2:NM_199138:exon1:c.C660G:p.P220P	exonic	ENSG00000165566	NA	synonymous SNV	ENSG00000165566:ENST00000381853:exon1:c.C660G:p.P220P,ENSG00000165566:ENST00000515384:exon1:c.C660G:p.P220P,ENSG00000165566:ENST00000357816:exon2:c.C660G:p.P220P	NA	NA	13q12.13	NA	NA	Name=8	NA	rs201629500	0.01	0.01	NA	0.00658946	0.0209	NA	0.0115	0.0008	0.0031	0.02	NA	0.01	0.01	0.0149	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.039758	NA	NA	0.010837	0.00142	NA	NA	NA	6.6200296
990	1	12336147	12336147	T	C	exonic	VPS13D	NA	synonymous SNV	VPS13D:NM_015378:exon19:c.T2502C:p.N834N,VPS13D:NM_018156:exon19:c.T2502C:p.N834N	exonic	ENSG00000048707	NA	synonymous SNV	ENSG00000048707:ENST00000356315:exon19:c.T2502C:p.N834N,ENSG00000048707:ENST00000358136:exon19:c.T2502C:p.N834N	Score=608;Name=lod=395	NA	1p36.22	NA	NA	NA	NA	rs7546794	0.03	0.03	0.02	0.0267572	0.0099	NA	0.0144	0.0802	0.0082	0.01	NA	0.02	0.08	0.0189	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.133327	NA	NA	0.019535	0.079437	NA	0.029	NA	6.6183316
990	2	61937966	61937966	C	T	intergenic	XPO1,FAM161A	dist=172548;dist=114017	NA	NA	ncRNA_exonic	ENSG00000213486	NA	NA	NA	Score=609;Name=lod=399	NA	2p15	NA	Name=HNF4G_(SC-6558),HNF4A_(H-171)	Name=2	NA	rs10199975	0.36	0.36	0.39	0.355032	0.3817	0.1062	0.3314	0.6241	0.2372	0.38	0.11	0.35	0.63	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.344227	NA	NA	NA	NA	NA	0.297	NA	6.6183
990	18	44595647	44595647	C	T	exonic	KATNAL2	NA	synonymous SNV	KATNAL2:NM_031303:exon9:c.C666T:p.G222G	exonic	ENSG00000167216	NA	synonymous SNV	ENSG00000167216:ENST00000586198:exon1:c.C54T:p.G18G,ENSG00000167216:ENST00000245121:exon9:c.C666T:p.G222G,ENSG00000167216:ENST00000356157:exon10:c.C882T:p.G294G	Score=476;Name=lod=115	NA	18q21.1	NA	NA	NA	NA	rs56297904	0.01	0.01	0.006	0.00638978	0.0219	NA	0.0086	0.0008	0.0031	0.02	NA	0.01	0.002	0.0108	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.076876	NA	NA	0.015814	0.004085	NA	0.022	NA	6.6181526
990	17	37627387	37627387	A	G	exonic	CDK12	NA	synonymous SNV	CDK12:NM_015083:exon2:c.A1302G:p.S434S,CDK12:NM_016507:exon2:c.A1302G:p.S434S	exonic	ENSG00000167258	NA	synonymous SNV	ENSG00000167258:ENST00000430627:exon2:c.A1302G:p.S434S,ENSG00000167258:ENST00000447079:exon2:c.A1302G:p.S434S,ENSG00000167258:ENST00000584632:exon2:c.A1299G:p.S433S	Score=514;Name=lod=164	NA	17q12	NA	NA	NA	NA	rs56158954	0.01	0.01	0.006	0.00559105	0.0179	NA	0.0115	NA	0.002	0.02	NA	0.01	NA	0.0114	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.580313	NA	NA	0.019767	0.004766	ID=COSM436487;OCCURENCE=1(breast)	NA	NA	6.6175996
990	22	39712936	39712936	G	A	intronic	RPL3	NA	NA	NA	exonic	ENSG00000100316	NA	synonymous SNV	ENSG00000100316:ENST00000420536:exon4:c.C456T:p.H152H	NA	NA	22q13.1	NA	Name=Pol2-4H8	Name=11	NA	rs12484030	0.08	0.08	0.087	0.0854633	0.1093	0.0308	0.0605	0.1233	0.0838	0.11	0.02	0.07	0.12	0.1072	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.668194	NA	NA	NA	NA	NA	0.101	NA	6.6168333
990	7	150389677	150389677	G	C	exonic	GIMAP2	NA	synonymous SNV	GIMAP2:NM_015660:exon3:c.G303C:p.L101L	exonic	ENSG00000106560	NA	synonymous SNV	ENSG00000106560:ENST00000223293:exon3:c.G303C:p.L101L	NA	NA	7q36.1	NA	Name=CTCF	Name=2	NA	rs6952002	0.43	0.43	0.44	0.490216	0.337	0.2907	0.304	0.8661	0.4775	0.33	0.3	0.32	0.84	0.3827	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.075022	NA	NA	0.330349	0.787562	ID=COSM1449191;OCCURENCE=1(large_intestine)	0.464	NA	6.6166176
990	1	111968121	111968121	C	T	intronic	OVGP1	NA	NA	NA	intronic	ENSG00000085465	NA	NA	NA	NA	NA	1p13.2	NA	NA	NA	NA	rs1264887	0.27	0.27	0.256	0.263179	0.1103	0.4395	0.1441	0.3215	0.2444	0.12	0.46	0.17	0.34	0.1896	0.46	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	.	.	.	.	.	-0.545	1.53	-4.99	-1.198	-0.623	5.376	-0.544537	NA	1	0.083909	0.28685	ID=COSM146581;OCCURENCE=1(stomach)	0.196	NA	6.616191
990	6	29974608	29974608	C	G	ncRNA_exonic	HLA-J	NA	NA	NA	ncRNA_exonic	ENSG00000204622,ENSG00000237669	NA	NA	NA	NA	NA	6p22.1	NA	Name=SUZ12	Name=9	NA	rs9261106	0.05	0.05	0.054	0.0413339	0.0507	0.0357	0.0403	0.0499	0.0266	0.05	0.04	0.04	0.05	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.655727	NA	NA	NA	NA	NA	0.029	NA	6.6159666
990	6	29974672	29974672	T	G	ncRNA_exonic	HLA-J	NA	NA	NA	ncRNA_exonic	ENSG00000204622,ENSG00000237669	NA	NA	NA	Score=371;Name=lod=43	NA	6p22.1	NA	NA	Name=9	NA	rs9261107	0.05	0.05	0.055	0.0413339	0.0507	0.0357	0.0403	0.0499	0.0266	0.05	0.04	0.04	0.05	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.959899	NA	0	NA	NA	NA	0.029	NA	6.6159666
990	6	29975093	29975093	A	T	ncRNA_intronic	HLA-J,ZNRD1-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000204623	NA	NA	NA	Score=336;Name=lod=31	NA	6p22.1	NA	NA	Name=7	NA	rs6939616	0.05	0.05	0.044	0.0495208	0.0507	0.0357	0.0994	0.0499	0.0266	0.05	0.04	0.06	0.06	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.519856	NA	NA	NA	NA	NA	NA	NA	6.6159666
990	6	29975095	29975095	G	C	ncRNA_intronic	HLA-J,ZNRD1-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000204622,ENSG00000204623	NA	NA	NA	Score=336;Name=lod=31	NA	6p22.1	NA	NA	Name=7	NA	rs6940082	0.05	0.05	0.039	0.0495208	0.0507	0.0357	0.0994	0.0499	0.0266	0.05	0.04	0.06	0.05	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.532058	NA	0	NA	NA	NA	NA	NA	6.6159666
990	12	56531660	56531660	C	T	exonic	ESYT1	NA	synonymous SNV	ESYT1:NM_001184796:exon19:c.C2190T:p.V730V,ESYT1:NM_015292:exon19:c.C2160T:p.V720V	exonic	ENSG00000139641	NA	synonymous SNV	ENSG00000139641:ENST00000267113:exon19:c.C2190T:p.V730V,ENSG00000139641:ENST00000394048:exon19:c.C2160T:p.V720V,ENSG00000139641:ENST00000541590:exon19:c.C2190T:p.V730V	Score=630;Name=lod=486	NA	12q13.2	NA	NA	NA	NA	rs74967048	0.01	0.01	0.005	0.00678914	0.0219	0.001	0.013	NA	0.002	0.03	0.0017	0.02	0.002	0.0125	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.170487	NA	NA	0.01686	0.004085	NA	NA	NA	6.6154066
990	12	49717533	49717533	A	C	exonic	TROAP	NA	synonymous SNV	TROAP:NM_001100620:exon2:c.A142C:p.R48R,TROAP:NM_005480:exon2:c.A142C:p.R48R	exonic	ENSG00000135451	NA	synonymous SNV	ENSG00000135451:ENST00000551567:exon1:c.A142C:p.R48R,ENSG00000135451:ENST00000257909:exon2:c.A142C:p.R48R,ENSG00000135451:ENST00000380327:exon2:c.A142C:p.R48R,ENSG00000135451:ENST00000546735:exon2:c.A142C:p.R48R,ENSG00000135451:ENST00000546776:exon2:c.A142C:p.R48R,ENSG00000135451:ENST00000547807:exon2:c.A142C:p.R48R,ENSG00000135451:ENST00000548311:exon2:c.A142C:p.R48R,ENSG00000135451:ENST00000549275:exon2:c.A142C:p.R48R,ENSG00000135451:ENST00000549534:exon2:c.A142C:p.R48R,ENSG00000135451:ENST00000549891:exon2:c.A142C:p.R48R,ENSG00000135451:ENST00000550346:exon2:c.A142C:p.R48R,ENSG00000135451:ENST00000550709:exon2:c.A142C:p.R48R,ENSG00000135451:ENST00000551192:exon2:c.A142C:p.R48R,ENSG00000135451:ENST00000551245:exon2:c.A142C:p.R48R	Score=439;Name=lod=81	NA	12q13.12	NA	NA	NA	NA	rs8285	0.05	0.05	0.059	0.0628994	0.0109	0.001	0.0303	0.1906	0.0307	0.01	NA	0.04	0.18	0.0285	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.36808	3.36808	NA	0.011977	0.163414	NA	0.065	NA	6.6152896
991	1	9322155	9322155	C	T	exonic	H6PD	NA	synonymous SNV	H6PD:NM_004285:exon4:c.C783T:p.R261R	exonic	ENSG00000049239	NA	synonymous SNV	ENSG00000049239:ENST00000377403:exon4:c.C783T:p.R261R,ENSG00000049239:ENST00000602477:exon4:c.C816T:p.R272R	NA	NA	1p36.22	Score=814;Name=V$PAX2_01	NA	NA	NA	rs149778702	0.01	0.01	0.01	0.00519169	0.0209	NA	0.0029	NA	0.0031	0.02	NA	0.0028	NA	0.0127	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.051019	NA	NA	0.018256	0.004539	NA	0.007	NA	6.6148106
991	19	46124564	46124564	G	A	exonic	EML2	NA	synonymous SNV	EML2:NM_012155:exon11:c.C1023T:p.R341R,EML2:NM_001193268:exon14:c.C1626T:p.R542R,EML2:NM_001193269:exon14:c.C1464T:p.R488R	exonic	ENSG00000125746	NA	synonymous SNV	ENSG00000125746:ENST00000590575:exon3:c.C246T:p.R82R,ENSG00000125746:ENST00000588496:exon6:c.C570T:p.R190R,ENSG00000125746:ENST00000245925:exon11:c.C1023T:p.R341R,ENSG00000125746:ENST00000588308:exon11:c.C1023T:p.R341R,ENSG00000125746:ENST00000589876:exon11:c.C1023T:p.R341R,ENSG00000125746:ENST00000399594:exon14:c.C1497T:p.R499R,ENSG00000125746:ENST00000536630:exon14:c.C1464T:p.R488R,ENSG00000125746:ENST00000587152:exon14:c.C1626T:p.R542R	Score=317;Name=lod=26	NA	19q13.32	NA	NA	NA	NA	rs146103183	0.01	0.01	0.006	0.00798722	0.0189	NA	0.0187	NA	0.0082	0.01	NA	0.02	NA	0.013	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.866509	NA	NA	0.020233	0.004993	NA	0.007	NA	6.6145336
991	12	124417973	124417973	C	T	exonic	DNAH10	NA	synonymous SNV	DNAH10:NM_207437:exon76:c.C13038T:p.N4346N	exonic	ENSG00000197653	NA	synonymous SNV	ENSG00000197653:ENST00000409039:exon76:c.C13038T:p.N4346N	Score=543;Name=lod=214	NA	12q24.31	NA	NA	NA	NA	rs56219209	0.01	0.01	0.008	0.00798722	0.0189	0.005	0.0072	0.0008	0.0102	0.02	NA	0.01	0.002	0.0134	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.088795	NA	NA	0.020236	0.003535	NA	0.014	NA	6.6141306
991	1	167663476	167663476	A	G	exonic	RCSD1	NA	synonymous SNV	RCSD1:NM_052862:exon5:c.A411G:p.A137A	exonic	ENSG00000198771	NA	synonymous SNV	ENSG00000198771:ENST00000361496:exon4:c.A339G:p.A113A,ENSG00000198771:ENST00000537350:exon4:c.A321G:p.A107A,ENSG00000198771:ENST00000367854:exon5:c.A411G:p.A137A	Score=387;Name=lod=50	NA	1q24.2	NA	NA	NA	NA	rs7554805	0.01	0.01	0.005	0.00579073	0.0209	0.001	0.0029	0.0008	0.0041	0.02	NA	0.01	0.002	0.0144	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.376854	1.376854	NA	0.017791	0.004993	NA	0.007	NA	6.6135756
991	12	4920767	4920767	T	C	exonic	KCNA6	NA	synonymous SNV	KCNA6:NM_002235:exon1:c.T1560C:p.Y520Y	exonic	ENSG00000151079	NA	synonymous SNV	ENSG00000151079:ENST00000280684:exon1:c.T1560C:p.Y520Y,ENSG00000151079:ENST00000433855:exon1:c.T1560C:p.Y520Y	Score=422;Name=lod=69	NA	12p13.32	NA	NA	NA	NA	rs34642709	0.01	0.01	0.01	0.0133786	0.0189	NA	0.0043	0.0015	0.044	0.02	NA	0.01	0.0041	0.0164	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.755569	NA	NA	0.017907	0.001589	NA	0.007	NA	6.6134596
991	7	150491084	150491084	T	G	exonic	TMEM176B	NA	nonsynonymous SNV	TMEM176B:NM_001101311:exon3:c.A280C:p.S94R,TMEM176B:NM_001101312:exon3:c.A280C:p.S94R,TMEM176B:NM_014020:exon3:c.A280C:p.S94R	exonic	ENSG00000106565	NA	nonsynonymous SNV	ENSG00000106565:ENST00000429904:exon2:c.A280C:p.S94R,ENSG00000106565:ENST00000326442:exon3:c.A280C:p.S94R,ENSG00000106565:ENST00000434545:exon3:c.A280C:p.S94R,ENSG00000106565:ENST00000447204:exon3:c.A280C:p.S94R,ENSG00000106565:ENST00000492607:exon4:c.A280C:p.S94R	NA	NA	7q36.1	NA	NA	Name=10	NA	rs3173833	0.55	0.55	0.543	0.544129	0.5825	0.6111	0.4597	0.5045	0.5491	0.56	0.65	0.47	0.49	0.5589	0.65	0.45	T	0.0	B	0.001	B	0.683	N	1.000	P	-1.475	N	4.4	T	-1.052	T	0.000	T	0.072	-0.845	0.561	-0.527	-0.080	-0.697	3.203	-0.845274	NA	0.39	0.578488	0.508398	ID=COSM323877;OCCURENCE=1(lung),1(large_intestine)	0.428	NA	6.6134454
991	6	30882634	30882634	C	T	exonic	VARS2	NA	synonymous SNV	VARS2:NM_001167734:exon2:c.C111T:p.A37A,VARS2:NM_020442:exon2:c.C21T:p.A7A	exonic	ENSG00000137411	NA	synonymous SNV	ENSG00000137411:ENST00000321897:exon1:c.C21T:p.A7A,ENSG00000137411:ENST00000416670:exon2:c.C21T:p.A7A,ENSG00000137411:ENST00000421263:exon2:c.C21T:p.A7A,ENSG00000137411:ENST00000428017:exon2:c.C21T:p.A7A,ENSG00000137411:ENST00000541562:exon2:c.C111T:p.A37A	NA	NA	6p21.33	NA	Name=Pol2,YY1,YY1_(C-20)	Name=7	NA	rs1264302	0.24	0.24	0.235	0.222045	0.3559	0.247	0.2075	0.0983	0.2362	0.35	0.28	0.2	0.06	0.3215	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.300741	1.300741	NA	0.375923	0.145461	NA	0.283	NA	6.6133436
991	11	113078035	113078035	C	T	exonic	NCAM1	NA	synonymous SNV	NCAM1:NM_000615:exon7:c.C681T:p.L227L,NCAM1:NM_001076682:exon7:c.C681T:p.L227L,NCAM1:NM_001242607:exon7:c.C681T:p.L227L,NCAM1:NM_001242608:exon7:c.C681T:p.L227L,NCAM1:NM_181351:exon7:c.C681T:p.L227L	exonic	ENSG00000149294	NA	synonymous SNV	ENSG00000149294:ENST00000316851:exon5:c.C651T:p.L217L,ENSG00000149294:ENST00000401611:exon6:c.C678T:p.L226L,ENSG00000149294:ENST00000524665:exon6:c.C858T:p.L286L,ENSG00000149294:ENST00000533760:exon6:c.C327T:p.L109L	Score=443;Name=lod=84	NA	11q23.2	NA	NA	NA	NA	rs17115154	0.01	0.01	0.011	0.00579073	0.0209	NA	0.0086	0.0008	0.001	0.02	NA	0.01	NA	0.0127	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.198509	NA	NA	0.019731	0.004931	NA	NA	NA	6.6133356
991	1	120054208	120054208	C	T	exonic	HSD3B1	NA	synonymous SNV	HSD3B1:NM_000862:exon3:c.C228T:p.V76V	exonic	ENSG00000203857	NA	synonymous SNV	ENSG00000203857:ENST00000528909:exon2:c.C228T:p.V76V,ENSG00000203857:ENST00000235547:exon3:c.C234T:p.V78V,ENSG00000203857:ENST00000369413:exon3:c.C228T:p.V76V,ENSG00000203857:ENST00000531340:exon3:c.C228T:p.V76V	NA	NA	1p12	Score=779;Name=V$P53_01	NA	NA	NA	rs6200	0.09	0.09	0.076	0.128794	0.005	0.0546	0.0677	0.357	0.0675	0.0013	0.03	0.06	0.32	0.0456	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.844325	NA	NA	0.003372	0.291194	NA	0.109	NA	6.6126946
991	21	39775558	39775558	G	A	exonic	ERG	NA	synonymous SNV	ERG:NM_001136155:exon3:c.C186T:p.D62D,ERG:NM_001243429:exon4:c.C186T:p.D62D,ERG:NM_182918:exon4:c.C462T:p.D154D,ERG:NM_001136154:exon6:c.C483T:p.D161D,ERG:NM_001243428:exon6:c.C483T:p.D161D,ERG:NM_001243432:exon6:c.C483T:p.D161D,ERG:NM_004449:exon6:c.C483T:p.D161D	exonic	ENSG00000157554	NA	synonymous SNV	ENSG00000157554:ENST00000453032:exon3:c.C186T:p.D62D,ENSG00000157554:ENST00000288319:exon4:c.C462T:p.D154D,ENSG00000157554:ENST00000398897:exon4:c.C186T:p.D62D,ENSG00000157554:ENST00000398905:exon4:c.C462T:p.D154D,ENSG00000157554:ENST00000398907:exon4:c.C462T:p.D154D,ENSG00000157554:ENST00000398911:exon5:c.C483T:p.D161D,ENSG00000157554:ENST00000398910:exon6:c.C483T:p.D161D,ENSG00000157554:ENST00000398919:exon6:c.C483T:p.D161D,ENSG00000157554:ENST00000417133:exon6:c.C483T:p.D161D,ENSG00000157554:ENST00000442448:exon6:c.C483T:p.D161D	Score=393;Name=lod=53	NA	21q22.2	NA	NA	NA	NA	rs17230484	0.01	0.01	0.008	0.0061901	0.0179	NA	0.0101	0.003	0.002	0.02	NA	0.02	0.002	0.0166	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.484317	NA	NA	0.019651	0.005901	NA	0.022	NA	6.6125156
991	17	39563686	39563686	A	G	ncRNA_intronic	LOC100505782	NA	NA	NA	ncRNA_exonic	ENSG00000225438	NA	NA	NA	Score=376;Name=lod=45	NA	17q21.2	NA	Name=CEBPB	NA	NA	rs117287459	0.03	0.03	0.017	0.0175719	0.0547	NA	0.0418	0.0015	0.002	0.05	NA	0.04	0.002	NA	0.054	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.456002	NA	NA	NA	NA	NA	0.036	NA	6.6119666
991	13	99948178	99948178	C	A	exonic	GPR183	NA	synonymous SNV	GPR183:NM_004951:exon2:c.G222T:p.V74V	exonic	ENSG00000169508	NA	synonymous SNV	ENSG00000169508:ENST00000376414:exon2:c.G222T:p.V74V	Score=603;Name=lod=375	NA	13q32.3	NA	NA	Name=2	NA	rs2230342	0.27	0.27	0.274	0.256789	0.3748	0.1875	0.2421	0.2103	0.2802	0.35	0.2	0.28	0.2	0.308	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.642609	NA	NA	0.373372	0.24512	NA	0.246	NA	6.6104946
991	6	30882781	30882781	G	T	exonic	VARS2	NA	synonymous SNV	VARS2:NM_001167734:exon2:c.G258T:p.A86A,VARS2:NM_020442:exon2:c.G168T:p.A56A	exonic	ENSG00000137411	NA	synonymous SNV	ENSG00000137411:ENST00000321897:exon1:c.G168T:p.A56A,ENSG00000137411:ENST00000416670:exon2:c.G168T:p.A56A,ENSG00000137411:ENST00000421263:exon2:c.G168T:p.A56A,ENSG00000137411:ENST00000428017:exon2:c.G168T:p.A56A,ENSG00000137411:ENST00000541562:exon2:c.G258T:p.A86A	NA	NA	6p21.33	NA	Name=ZBTB7A_(SC-34508),Pol2-4H8,YY1_(C-20),TAF1,TAL1_(SC-12984)	Name=7	NA	rs1264301	0.24	0.24	0.25	0.222045	0.3559	0.247	0.2075	0.0983	0.2362	0.35	0.28	0.2	0.06	0.3236	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.127671	NA	NA	0.376892	0.146358	NA	0.283	NA	6.6102746
991	10	90749256	90749256	G	A	intronic	ACTA2	NA	NA	NA	intronic	ENSG00000107796	NA	NA	NA	NA	NA	10q23.31	NA	Name=POU2F2,Oct-2,EBF1_(C-8),EBF	Name=4	NA	rs2234767	0.17	0.17	0.149	0.184105	0.1233	0.4187	0.1974	0.0257	0.2096	0.11	0.38	0.17	0.03	0.1475	0.38	0.36	T	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.921	T	0.000	T	.	-0.08	3.61	-0.743	-0.139	-0.853	5.716	-0.079722	NA	0	0.119036	0.049658	NA	0.08	NA	6.610164
991	9	139368953	139368953	G	A	exonic	SEC16A	NA	nonsynonymous SNV	SEC16A:NM_001276418:exon2:c.C3115T:p.R1039C,SEC16A:NM_014866:exon3:c.C3115T:p.R1039C	exonic	ENSG00000148396	NA	nonsynonymous SNV	ENSG00000148396:ENST00000290037:exon1:c.C2581T:p.R861C,ENSG00000148396:ENST00000313050:exon1:c.C3115T:p.R1039C,ENSG00000148396:ENST00000371706:exon1:c.C2581T:p.R861C,ENSG00000148396:ENST00000431893:exon1:c.C2581T:p.R861C	NA	NA	9q34.3	NA	NA	NA	NA	rs3812594	0.16	0.16	0.141	0.134185	0.2535	0.0536	0.255	0.0401	0.136	0.26	0.07	0.23	0.05	0.21	0.26	0.12	T	0.004	B	0.001	B	0.391	N	1.000	P	0	N	1.89	T	-0.956	T	0.000	T	0.078	1.581	11.24	0.615	-0.076	0.335	5.795	1.581289	1.581289	0.08	0.261344	0.073037	NA	0.13	NA	6.6084894
991	6	29694443	29694443	A	G	ncRNA_exonic	HLA-F-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000214922	NA	NA	NA	Score=737;Name=lod=1318	NA	6p22.1	NA	Name=Pol2-4H8	NA	NA	rs62391801	0.06	0.06	0.033	0.0756789	0.0586	0.1567	0.0375	0.0008	0.138	0.06	0.14	0.03	0.002	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.927866	NA	NA	NA	NA	NA	0.087	NA	6.6080666
991	2	198362018	198362018	T	C	exonic	HSPD1	NA	synonymous SNV	HSPD1:NM_002156:exon3:c.A273G:p.K91K,HSPD1:NM_199440:exon3:c.A273G:p.K91K	exonic	ENSG00000144381	NA	synonymous SNV	ENSG00000144381:ENST00000345042:exon3:c.A273G:p.K91K,ENSG00000144381:ENST00000388968:exon3:c.A273G:p.K91K,ENSG00000144381:ENST00000426480:exon3:c.A399G:p.K133K,ENSG00000144381:ENST00000430176:exon3:c.A273G:p.K91K,ENSG00000144381:ENST00000452200:exon3:c.A273G:p.K91K,ENSG00000144381:ENST00000544407:exon3:c.A273G:p.K91K,ENSG00000144381:ENST00000428204:exon4:c.A273G:p.K91K	Score=719;Name=lod=1119	NA	2q33.1	Score=893;Name=V$FOXJ2_01	NA	NA	NA	rs8539	0.66	0.66	0.701	0.654553	0.7256	0.4722	0.6225	0.7474	0.6667	0.72	0.53	0.63	0.75	0.649	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.116213	NA	NA	0.684186	0.717204	NA	0.696	CLINSIG=probable-non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000117240.2|RCV000125392.1;CLNDSDB=.|.;CLNDSDBID=.|.	6.6078806
991	6	76633385	76633385	C	T	exonic	IMPG1	NA	nonsynonymous SNV	IMPG1:NM_001563:exon16:c.G2282A:p.S761N	exonic	ENSG00000112706	NA	nonsynonymous SNV	ENSG00000112706:ENST00000369952:exon3:c.G365A:p.S122N,ENSG00000112706:ENST00000369950:exon16:c.G2282A:p.S761N	NA	NA	6q14.1	NA	NA	NA	NA	rs3778005	0.16	0.16	0.124	0.124201	0.2634	0.0546	0.2262	0.0212	0.1196	0.27	0.05	0.25	0.02	0.2017	0.27	0.4	T	0.004	B	0.002	B	0.396	N	1.000	P	0.55	N	2.12	T	-0.968	T	0.010	T	0.004	-2.193	0.005	0.067	-0.129	0.064	3.327	-2.192799	NA	0.1	0.260531	0.060627	NA	0.152	NA	6.6077024
991	17	79496295	79496295	T	C	exonic	FSCN2	NA	synonymous SNV	FSCN2:NM_001077182:exon1:c.T738C:p.P246P,FSCN2:NM_012418:exon1:c.T738C:p.P246P	exonic	ENSG00000186765	NA	synonymous SNV	ENSG00000186765:ENST00000334850:exon1:c.T738C:p.P246P,ENSG00000186765:ENST00000417245:exon1:c.T738C:p.P246P	NA	NA	17q25.3	NA	NA	NA	NA	rs34567655	0.07	0.07	0.072	0.100639	0.005	0.006	0.0389	0.295	0.0777	0.01	0.01	0.03	0.28	0.0487	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.366265	NA	NA	0.005453	0.243281	NA	0.051	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000079420.1;CLNDSDB=.;CLNDSDBID=.	6.6075136
991	7	100550354	100550354	C	A	intergenic	ACHE,MUC12	dist=56813;dist=62550	NA	NA	exonic	ENSG00000228273	NA	nonsynonymous SNV	ENSG00000228273:ENST00000379458:exon2:c.C935A:p.T312N	NA	NA	7q22.1	NA	NA	NA	NA	rs74220905	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2259	NA	0.29	T	.	.	.	.	.	.	.	.	0.345	N	.	.	-0.989	T	0.061	T	0.093	0.622	7.348	1.06	0.377	-1.313	6.701	0.622196	NA	0.52	NA	NA	NA	0.007	NA	6.6074334
991	1	210856818	210856818	T	A	exonic	KCNH1	NA	synonymous SNV	KCNH1:NM_002238:exon11:c.A2694T:p.T898T,KCNH1:NM_172362:exon11:c.A2775T:p.T925T	exonic	ENSG00000143473	NA	synonymous SNV	ENSG00000143473:ENST00000271751:exon11:c.A2775T:p.T925T,ENSG00000143473:ENST00000367007:exon11:c.A2694T:p.T898T	NA	NA	1q32.2	Score=749;Name=V$NRSF_01	NA	NA	NA	rs114571785	0.01	0.01	0.006	0.00958466	0.0189	NA	0.0231	0.0008	0.0123	0.02	NA	0.02	0.002	0.0202	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4662	NA	NA	0.020349	0.003404	NA	0.007	NA	6.6072176
991	5	178416063	178416063	G	A	exonic	GRM6	NA	synonymous SNV	GRM6:NM_000843:exon6:c.C1227T:p.Y409Y	exonic	ENSG00000113262	NA	synonymous SNV	ENSG00000113262:ENST00000231188:exon6:c.C1227T:p.Y409Y,ENSG00000113262:ENST00000517717:exon7:c.C1227T:p.Y409Y	Score=549;Name=lod=227	NA	5q35.3	NA	NA	NA	NA	rs2645339	0.52	0.52	0.504	NA	NA	NA	NA	NA	NA	0.55	0.59	0.49	0.43	0.5256	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.048903	NA	NA	0.53407	0.398774	ID=COSM1180460;OCCURENCE=1(prostate)	0.551	CLINSIG=probable-non-pathogenic;CLNDBN=not_provided;CLNREVSTAT=single;CLNACC=RCV000086023.2;CLNDSDB=.;CLNDSDBID=.	6.6069966
991	6	44371690	44371690	T	C	exonic	CDC5L	NA	synonymous SNV	CDC5L:NM_001253:exon6:c.T684C:p.S228S	exonic	ENSG00000096401	NA	synonymous SNV	ENSG00000096401:ENST00000371477:exon6:c.T684C:p.S228S	Score=727;Name=lod=1200	NA	6p21.1	NA	NA	NA	NA	rs11571943	0.02	0.02	0.025	0.0239617	0.0169	0.002	0.0187	0.053	0.0184	0.02	NA	0.02	0.05	0.0223	0.076	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.109224	NA	NA	0.020814	0.046981	NA	0.051	NA	6.6066526
991	1	43825644	43825644	T	C	exonic	CDC20	NA	synonymous SNV	CDC20:NM_001255:exon5:c.T432C:p.Y144Y	exonic	ENSG00000117399	NA	synonymous SNV	ENSG00000117399:ENST00000372462:exon4:c.T432C:p.Y144Y,ENSG00000117399:ENST00000310955:exon5:c.T432C:p.Y144Y	Score=514;Name=lod=163	NA	1p34.2	NA	NA	Name=20	NA	rs839763	0.28	0.28	0.248	0.229034	0.3708	0.1071	0.3674	0.2436	0.091	0.38	0.11	0.38	0.27	0.3069	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.782527	NA	NA	0.382326	0.281888	NA	0.362	NA	6.6066406
991	6	33768897	33768897	A	G	exonic	MLN	NA	nonsynonymous SNV	MLN:NM_001040109:exon2:c.T44C:p.V15A,MLN:NM_001184698:exon2:c.T44C:p.V15A,MLN:NM_002418:exon2:c.T44C:p.V15A	exonic	ENSG00000096395	NA	nonsynonymous SNV	ENSG00000096395:ENST00000266003:exon2:c.T44C:p.V15A,ENSG00000096395:ENST00000430124:exon2:c.T44C:p.V15A,ENSG00000096395:ENST00000507738:exon2:c.T44C:p.V15A	NA	NA	6p21.31	NA	Name=ERalpha_a	NA	NA	rs2281820	0.61	0.61	0.588	0.631589	0.5368	0.8562	0.5216	0.4932	0.7628	0.54	0.83	0.51	0.52	0.6096	0.83	0.68	T	0.0	B	0.0	B	0.544	N	1.000	P	0.83	L	0.71	T	-1.054	T	0.027	T	0.067	-0.818	0.628	-1.12	-0.651	-0.753	7.218	-0.818365	NA	0.57	0.580698	0.505901	NA	0.71	NA	6.6062354
991	18	9936132	9936132	T	C	exonic	VAPA	NA	synonymous SNV	VAPA:NM_003574:exon3:c.T258C:p.D86D,VAPA:NM_194434:exon3:c.T258C:p.D86D	exonic	ENSG00000101558	NA	synonymous SNV	ENSG00000101558:ENST00000340541:exon3:c.T258C:p.D86D,ENSG00000101558:ENST00000400000:exon3:c.T258C:p.D86D	Score=681;Name=lod=782	NA	18p11.22	NA	NA	NA	NA	rs29152	0.05	0.05	0.041	0.0553115	0.0169	0.0774	0.0447	0.0991	0.0204	0.02	0.07	0.03	0.11	0.0315	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.272911	1.272911	NA	0.012325	0.100427	NA	0.058	NA	6.6059416
991	16	56670827	56670827	C	T	ncRNA_exonic	MT1JP	NA	NA	NA	ncRNA_exonic	ENSG00000255986	NA	NA	NA	NA	NA	16q12.2	Score=781;Name=V$OCT1_01	Name=SUZ12	NA	NA	rs11076159	0.08	0.08	0.092	0.0876597	0.0229	0.1052	0.0432	0.1982	0.0184	0.03	0.09	0.04	0.2	0.038	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.722298	NA	NA	NA	NA	NA	0.101	NA	6.6057666
992	9	90502458	90502458	T	A	exonic	SPATA31E1	NA	nonsynonymous SNV	SPATA31E1:NM_178828:exon4:c.T3056A:p.V1019E	exonic	ENSG00000177992	NA	nonsynonymous SNV	ENSG00000177992:ENST00000325643:exon4:c.T3056A:p.V1019E	NA	NA	9q22.1	NA	NA	NA	NA	rs10868670	0.75	0.75	0.761	0.761781	0.5666	0.88	0.7205	0.9501	0.6155	0.56	0.87	0.71	0.94	0.6223	0.94	1	T	0.0	B	0.0	B	.	.	1.000	P	-0.695	N	4.07	T	-1.021	T	0.000	T	0.035	-1.487	0.018	2.16	0.189	-0.014	2.740	-1.486716	NA	1	0.539535	0.881071	NA	0.717	NA	6.6048984
992	9	100367813	100367813	A	G	exonic	TSTD2	NA	synonymous SNV	TSTD2:NM_139246:exon8:c.T1065C:p.C355C	exonic	ENSG00000136925	NA	synonymous SNV	ENSG00000136925:ENST00000375165:exon5:c.T285C:p.C95C,ENSG00000136925:ENST00000354801:exon6:c.T285C:p.C95C,ENSG00000136925:ENST00000341170:exon8:c.T1065C:p.C355C,ENSG00000136925:ENST00000375172:exon8:c.T387C:p.C129C	Score=650;Name=lod=584	NA	9q22.33	NA	NA	NA	NA	rs1928642	0.13	0.13	0.123	0.16853	0.002	0.1498	0.1628	0.4191	0.0245	NA	0.11	0.1	0.35	0.0581	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.542881	1.542881	NA	0.002093	0.369042	NA	0.109	NA	6.6044736
992	18	10696534	10696534	C	T	exonic	PIEZO2	NA	synonymous SNV	PIEZO2:NM_022068:exon42:c.G6492A:p.T2164T	exonic	ENSG00000154864	NA	synonymous SNV	ENSG00000154864:ENST00000285141:exon4:c.G57A:p.T19T,ENSG00000154864:ENST00000538948:exon4:c.G363A:p.T121T,ENSG00000154864:ENST00000302079:exon42:c.G6492A:p.T2164T,ENSG00000154864:ENST00000503781:exon42:c.G6492A:p.T2164T,ENSG00000154864:ENST00000580640:exon44:c.G6567A:p.T2189T	Score=480;Name=lod=119	NA	18p11.22	NA	NA	NA	NA	rs117799245	0.01	0.01	0.011	0.0157748	0.0268	0.001	0.0101	0.0008	0.044	0.02	NA	0.01	0.002	0.0164	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.085733	NA	NA	0.019186	0.003631	NA	0.014	NA	6.6042806
992	18	11893554	11893554	C	G	exonic	MPPE1	NA	synonymous SNV	MPPE1:NM_001242904:exon3:c.G303C:p.A101A,MPPE1:NM_023075:exon4:c.G303C:p.A101A	exonic	ENSG00000154889	NA	synonymous SNV	ENSG00000154889:ENST00000309976:exon3:c.G303C:p.A101A,ENSG00000154889:ENST00000592331:exon3:c.G81C:p.A27A,ENSG00000154889:ENST00000592977:exon3:c.G303C:p.A101A,ENSG00000154889:ENST00000317235:exon4:c.G303C:p.A101A,ENSG00000154889:ENST00000344987:exon4:c.G303C:p.A101A,ENSG00000154889:ENST00000399978:exon4:c.G303C:p.A101A,ENSG00000154889:ENST00000496196:exon4:c.G303C:p.A101A,ENSG00000154889:ENST00000588072:exon4:c.G303C:p.A101A,ENSG00000154889:ENST00000317251:exon5:c.G12C:p.A4A,ENSG00000154889:ENST00000588186:exon5:c.G303C:p.A101A,ENSG00000154889:ENST00000589267:exon5:c.G303C:p.A101A,ENSG00000154889:ENST00000588191:exon6:c.G303C:p.A101A	Score=543;Name=lod=215	NA	18p11.21	NA	NA	NA	NA	rs34932177	0.06	0.06	0.064	0.0636981	0.0139	0.0774	0.0274	0.149	0.0112	0.01	0.08	0.04	0.14	0.0313	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.238508	1.238508	NA	0.017209	0.133908	NA	0.029	NA	6.6042576
992	2	73717567	73717567	G	T	exonic	ALMS1	NA	nonsynonymous SNV	ALMS1:NM_015120:exon10:c.G8478T:p.R2826S	exonic	ENSG00000116127	NA	nonsynonymous SNV	ENSG00000116127:ENST00000409009:exon9:c.G8352T:p.R2784S,ENSG00000116127:ENST00000264448:exon10:c.G8478T:p.R2826S	NA	NA	2p13.1	NA	NA	NA	NA	rs2056486	0.33	0.33	0.349	0.358227	0.2266	0.0089	0.3905	0.8578	0.1554	0.23	0.01	0.35	0.85	0.2663	0.85	1	T	0.0	B	0.0	B	0.152	N	1.000	P	-1.24	N	3.58	T	-1.042	T	0.000	T	0.097	-1.709	0.011	0.258	-0.189	-0.037	6.689	-1.709383	NA	1	0.236784	0.727493	NA	0.42	NA	6.6036494
992	11	64138805	64138805	T	C	exonic	RPS6KA4	NA	synonymous SNV	RPS6KA4:NM_001006944:exon17:c.T2154C:p.N718N,RPS6KA4:NM_003942:exon17:c.T2172C:p.N724N	exonic	ENSG00000162302	NA	synonymous SNV	ENSG00000162302:ENST00000294261:exon13:c.T1428C:p.N476N,ENSG00000162302:ENST00000334205:exon17:c.T2172C:p.N724N,ENSG00000162302:ENST00000528057:exon17:c.T2151C:p.N717N,ENSG00000162302:ENST00000530504:exon17:c.T2106C:p.N702N	Score=571;Name=lod=279	NA	11q13.1	Score=894;Name=V$NF1_Q6	NA	NA	NA	rs11542299	0.27	0.27	0.212	0.252995	0.3708	0.2113	0.3833	0.0514	0.3548	0.39	0.22	0.35	0.06	0.3464	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.950192	NA	NA	0.346054	0.100417	NA	0.217	NA	6.6034126
992	19	21240722	21240722	T	C	exonic	ZNF430	NA	synonymous SNV	ZNF430:NM_001172671:exon5:c.T1605C:p.T535T,ZNF430:NM_025189:exon5:c.T1608C:p.T536T	exonic	ENSG00000118620	NA	synonymous SNV	ENSG00000118620:ENST00000261560:exon5:c.T1608C:p.T536T	Score=409;Name=lod=61	NA	19p12	NA	NA	NA	NA	rs61744905	0.06	0.06	0.066	0.0702875	0.0209	NA	0.0202	0.2315	0.0112	0.02	NA	0.02	0.2	0.0261	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.266671	NA	NA	0.016283	0.175897	NA	0.08	NA	6.6033836
992	21	31802768	31802768	G	A	exonic	KRTAP13-4	NA	nonsynonymous SNV	KRTAP13-4:NM_181600:exon1:c.G175A:p.A59T	exonic	ENSG00000186971	NA	nonsynonymous SNV	ENSG00000186971:ENST00000334068:exon1:c.G175A:p.A59T	NA	NA	21q22.11	NA	NA	NA	NA	rs2226548	0.52	0.52	0.551	0.551118	0.5736	0.2758	0.6427	0.6452	0.6196	0.55	0.29	0.65	0.66	0.5697	0.66	1	T	0.001	B	0.001	B	0.477	N	1.000	P	-2.365	N	4.27	T	-0.909	T	0.000	T	0.022	-1.773	0.01	-2.5	-0.445	-0.656	0.640	-1.772617	NA	1	0.58686	0.635724	NA	0.645	NA	6.6031734
992	20	48574454	48574454	G	A	intergenic	RNF114,SNAI1	dist=4032;dist=25059	NA	NA	ncRNA_exonic	ENSG00000229222	NA	NA	NA	Score=437;Name=lod=80	NA	20q13.13	NA	Name=CTCF	Name=11	NA	rs6067284	0.33	0.33	0.274	0.358227	0.3976	0.3413	0.4625	0.0983	0.6125	0.41	0.35	0.43	0.11	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.209146	2.209146	NA	NA	NA	NA	0.268	NA	6.6024
992	4	189067987	189067987	C	T	exonic	TRIML1	NA	synonymous SNV	TRIML1:NM_178556:exon6:c.C868T:p.L290L	exonic	ENSG00000184108	NA	synonymous SNV	ENSG00000184108:ENST00000332517:exon6:c.C868T:p.L290L	Score=399;Name=lod=56	NA	4q35.2	NA	NA	NA	NA	rs77324985	0.02	0.02	0.018	0.0229633	0.0179	NA	0.0101	0.0499	0.0245	0.02	NA	0.01	0.05	0.0228	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.521483	NA	NA	0.023721	0.042669	NA	0.014	NA	6.6022456
992	11	56508476	56508476	T	C	intronic	OR8U8	NA	NA	NA	ncRNA_exonic	ENSG00000181325	NA	NA	NA	Score=295;Name=lod=21	NA	11q12.1	Score=922;Name=V$TATA_C	Name=MafK_(ab50322)	NA	NA	rs11228758	0.3	0.3	0.237	0.321286	0.2048	0.6052	0.4755	0.0189	0.4479	0.2	0.59	0.44	0.03	0.3289	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.222183	NA	NA	0.197989	0.04552	NA	0.261	NA	6.6016443
992	20	3214895	3214895	C	T	exonic	SLC4A11	NA	synonymous SNV	SLC4A11:NM_032034:exon4:c.G405A:p.A135A,SLC4A11:NM_001174089:exon5:c.G357A:p.A119A,SLC4A11:NM_001174090:exon5:c.G486A:p.A162A	exonic	ENSG00000088836	NA	synonymous SNV	ENSG00000088836:ENST00000380056:exon4:c.G405A:p.A135A,ENSG00000088836:ENST00000380059:exon5:c.G486A:p.A162A,ENSG00000088836:ENST00000437836:exon5:c.G357A:p.A119A,ENSG00000088836:ENST00000539553:exon5:c.G357A:p.A119A	Score=535;Name=lod=200	NA	20p13	NA	NA	NA	NA	rs34460295	0.02	0.02	0.026	0.0233626	0.0249	0.0198	0.0086	0.0333	0.0225	0.03	0.02	0.01	0.03	0.0202	0.041	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.509826	1.509826	NA	0.020233	0.04108	NA	0.007	NA	6.6013336
992	2	27803279	27803279	C	T	exonic	C2orf16	NA	synonymous SNV	C2orf16:NM_032266:exon1:c.C3840T:p.T1280T	exonic	ENSG00000221843	NA	synonymous SNV	ENSG00000221843:ENST00000408964:exon1:c.C3840T:p.T1280T	NA	NA	2p23.3	NA	NA	Name=2	NA	rs145678525	0.01	0.01	0.008	0.0113818	0.0209	0.002	0.0029	0.003	0.0286	0.02	0.0017	0.01	0.0041	0.0214	0.023	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.089555	NA	NA	0.023128	0.004921	NA	0.014	NA	6.6012386
992	1	12921332	12921332	T	C	exonic	PRAMEF2	NA	nonsynonymous SNV	PRAMEF2:NM_023014:exon4:c.T1123C:p.C375R	exonic	ENSG00000120952	NA	nonsynonymous SNV	ENSG00000120952:ENST00000240189:exon4:c.T1123C:p.C375R	NA	NA	1p36.21	NA	NA	NA	NA	rs1063796	NA	NA	0.187	0.409944	0.3449	0.4385	0.3473	0.4728	0.407	NA	NA	NA	NA	0.3877	NA	1	T	0.0	B	0.001	B	0.433	N	0.887	N	-1.355	N	3.03	T	-0.934	T	0.006	T	0.164	-2.28	0.004	0.824	-0.055	-0.464	3.343	-2.280337	NA	1	NA	NA	ID=COSM1626370;OCCURENCE=1(liver)	NA	NA	6.6007334
992	4	99393736	99393736	T	A	exonic	TSPAN5	NA	synonymous SNV	TSPAN5:NM_005723:exon8:c.A744T:p.I248I	exonic	ENSG00000168785	NA	synonymous SNV	ENSG00000168785:ENST00000305798:exon8:c.A744T:p.I248I,ENSG00000168785:ENST00000505184:exon8:c.A531T:p.I177I	Score=468;Name=lod=106	NA	4q23	NA	NA	NA	NA	rs1128512	0.1	0.1	0.104	0.115216	0.0089	NA	0.0432	0.3812	0.0348	0.01	NA	0.04	0.39	0.0438	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.834882	1.834882	NA	0.013605	0.314117	NA	0.072	NA	6.6003616
992	5	57755703	57755703	C	T	exonic	PLK2	NA	synonymous SNV	PLK2:NM_001252226:exon1:c.G84A:p.A28A,PLK2:NM_006622:exon1:c.G84A:p.A28A	exonic	ENSG00000145632	NA	synonymous SNV	ENSG00000145632:ENST00000274289:exon1:c.G84A:p.A28A	Score=607;Name=lod=392	NA	5q11.2	NA	Name=Pol2,Pol2(b)	NA	NA	rs3211270	0.39	0.39	0.368	0.390974	0.3479	0.5089	0.4467	0.2572	0.455	0.34	0.55	0.41	0.26	0.3825	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.943489	NA	NA	0.336012	0.271902	NA	0.333	NA	6.6002546
992	8	13356807	13356807	C	T	exonic	DLC1	NA	synonymous SNV	DLC1:NM_024767:exon2:c.G774A:p.L258L,DLC1:NM_182643:exon2:c.G774A:p.L258L	exonic	ENSG00000164741	NA	synonymous SNV	ENSG00000164741:ENST00000276297:exon2:c.G774A:p.L258L,ENSG00000164741:ENST00000316609:exon2:c.G774A:p.L258L,ENSG00000164741:ENST00000511869:exon2:c.G774A:p.L258L	NA	NA	8p22	NA	NA	Name=13	NA	rs62637614	0.03	0.03	0.025	0.0283546	0.0239	NA	0.0331	0.0507	0.0286	0.02	NA	0.05	0.06	0.0222	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.772819	NA	NA	0.020814	0.053109	NA	0.043	NA	6.5997526
992	11	20483650	20483650	T	C	exonic	PRMT3	NA	synonymous SNV	PRMT3:NM_001145166:exon10:c.T1011C:p.I337I,PRMT3:NM_001145167:exon11:c.T966C:p.I322I,PRMT3:NM_005788:exon12:c.T1197C:p.I399I	exonic	ENSG00000185238	NA	synonymous SNV	ENSG00000185238:ENST00000437750:exon10:c.T1011C:p.I337I,ENSG00000185238:ENST00000331079:exon12:c.T1197C:p.I399I	Score=643;Name=lod=547	NA	11p15.1	NA	NA	NA	NA	rs34565672	0.01	0.01	0.01	0.0141773	0.0189	NA	0.0202	0.0023	0.0358	0.02	NA	0.01	0.01	0.0206	0.028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.267241	1.267241	NA	0.027791	0.005901	NA	0.007	NA	6.5993756
992	2	98427633	98427633	C	T	exonic	TMEM131	NA	synonymous SNV	TMEM131:NM_015348:exon18:c.G1926A:p.E642E	exonic	ENSG00000075568	NA	synonymous SNV	ENSG00000075568:ENST00000186436:exon18:c.G1926A:p.E642E	Score=649;Name=lod=579	NA	2q11.2	NA	NA	NA	NA	rs61729688	0.02	0.02	0.015	0.0269569	0.0239	NA	0.0288	0.0681	0.001	0.02	NA	0.03	0.05	0.0202	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.8737	NA	NA	0.023438	0.0488	NA	0.014	NA	6.5991286
992	11	6588256	6588256	G	A	exonic	DNHD1	NA	synonymous SNV	DNHD1:NM_144666:exon36:c.G11517A:p.Q3839Q	exonic	ENSG00000179532	NA	synonymous SNV	ENSG00000179532:ENST00000525080:exon2:c.G261A:p.Q87Q,ENSG00000179532:ENST00000527990:exon34:c.G11517A:p.Q3839Q,ENSG00000179532:ENST00000254579:exon36:c.G11517A:p.Q3839Q	NA	NA	11p15.4	NA	NA	Name=4	NA	rs12418976	0.06	0.06	0.056	0.0638978	0.0209	NA	0.036	0.205	0.0031	0.01	NA	0.03	0.21	0.0292	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.620565	NA	NA	0.018114	0.148984	NA	0.065	NA	6.5984526
992	19	10600418	10600418	G	A	exonic	KEAP1	NA	synonymous SNV	KEAP1:NM_012289:exon4:c.C1437T:p.D479D,KEAP1:NM_203500:exon4:c.C1437T:p.D479D	exonic	ENSG00000079999	NA	synonymous SNV	ENSG00000079999:ENST00000171111:exon4:c.C1437T:p.D479D,ENSG00000079999:ENST00000393623:exon4:c.C1437T:p.D479D	Score=450;Name=lod=90	NA	19p13.2	NA	NA	NA	NA	rs35074907	0.01	0.01	0.012	0.00958466	0.0258	NA	0.0101	NA	0.0153	0.03	NA	0.02	NA	0.0187	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.68833	NA	NA	0.023721	0.003177	NA	0.007	NA	6.5984456
992	9	26998090	26998090	C	T	exonic	LRRC19	NA	synonymous SNV	LRRC19:NM_022901:exon3:c.G231A:p.E77E	exonic	ENSG00000184434	NA	synonymous SNV	ENSG00000184434:ENST00000380055:exon3:c.G231A:p.E77E	Score=349;Name=lod=35	NA	9p21.2	NA	NA	NA	NA	rs35776880	0.01	0.01	0.009	0.00858626	0.0268	NA	0.0144	0.0008	0.0051	0.02	NA	0.01	NA	0.0177	0.024	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.047622	NA	NA	0.023965	0.006355	NA	0.014	NA	6.5982016
992	2	73651967	73651967	C	T	exonic	ALMS1	NA	nonsynonymous SNV	ALMS1:NM_015120:exon5:c.C1174T:p.R392C	exonic	ENSG00000116127	NA	nonsynonymous SNV	ENSG00000116127:ENST00000409009:exon4:c.C1048T:p.R350C,ENSG00000116127:ENST00000264448:exon5:c.C1174T:p.R392C,ENSG00000116127:ENST00000377715:exon5:c.C1174T:p.R392C	NA	NA	2p13.1	NA	NA	NA	NA	rs3813227	0.34	0.34	0.365	0.363618	0.2266	0.0089	0.3919	0.8782	0.1544	0.23	0.01	0.35	0.87	0.2712	0.87	1	T	0.0	B	0.0	B	0.266	N	1.000	P	-1.1	N	3.26	T	-1.005	T	0.000	T	0.18	-1.057	0.187	0.185	-0.200	0.260	1.773	-1.056607	NA	0.18	0.237476	0.737261	NA	0.435	NA	6.5980574
992	3	9991163	9991163	A	G	exonic	PRRT3	NA	nonsynonymous SNV	PRRT3:NM_207351:exon2:c.T637C:p.S213P	exonic	ENSG00000163704	NA	nonsynonymous SNV	ENSG00000163704:ENST00000295984:exon2:c.T637C:p.S213P,ENSG00000163704:ENST00000411976:exon2:c.T637C:p.S213P,ENSG00000163704:ENST00000412055:exon2:c.T637C:p.S213P	NA	NA	3p25.3	NA	NA	NA	NA	rs55847610	0.37	0.37	0.383	0.381989	0.2147	0.1558	0.3271	0.8139	0.2423	0.22	0.21	0.34	0.81	0.2776	0.81	.	.	0.0	B	0.0	B	0.139	N	1.000	P	-1.04	N	2.79	T	-1.072	T	0.000	T	0.076	-2.631	0	0.544	-0.124	0.079	3.537	-2.631277	NA	1	0.243447	0.67189	ID=COSM149329;OCCURENCE=1(stomach)	0.565	NA	6.5975864
992	9	117552885	117552885	T	C	exonic	TNFSF15	NA	synonymous SNV	TNFSF15:NM_001204344:exon2:c.A426G:p.V142V,TNFSF15:NM_005118:exon4:c.A603G:p.V201V	exonic	ENSG00000181634	NA	synonymous SNV	ENSG00000181634:ENST00000374044:exon1:c.A372G:p.V124V,ENSG00000181634:ENST00000374045:exon4:c.A603G:p.V201V	Score=528;Name=lod=186	Name=Crohn's disease	9q32	NA	NA	Name=30	NA	rs3810936	0.69	0.69	0.692	0.711062	0.675	0.5069	0.6988	0.913	0.6943	0.68	0.52	0.72	0.89	0.7085	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.463953	NA	NA	0.68593	0.883114	NA	0.71	NA	6.5972366
992	16	787267	787267	G	A	exonic	NARFL	NA	synonymous SNV	NARFL:NM_022493:exon3:c.C225T:p.S75S	exonic	ENSG00000103245	NA	synonymous SNV	ENSG00000103245:ENST00000251588:exon3:c.C225T:p.S75S,ENSG00000103245:ENST00000301694:exon3:c.C225T:p.S75S,ENSG00000103245:ENST00000565425:exon3:c.C225T:p.S75S	Score=423;Name=lod=70	NA	16p13.3	NA	NA	NA	NA	rs35987447	0.01	0.01	0.005	0.00838658	0.0239	0.001	0.0086	0.003	0.0072	0.02	0.0017	0.01	0.002	0.0179	0.028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.44481	NA	NA	0.027674	0.005909	NA	NA	NA	6.5971926
992	16	4797457	4797457	C	T	exonic	C16orf71	NA	nonsynonymous SNV	C16orf71:NM_139170:exon9:c.C1394T:p.P465L	exonic	ENSG00000166246	NA	nonsynonymous SNV	ENSG00000166246:ENST00000299320:exon9:c.C1394T:p.P465L,ENSG00000166246:ENST00000590191:exon9:c.C1445T:p.P482L	NA	NA	16p13.3	NA	NA	Name=32	NA	rs17853375	0.49	0.49	0.461	0.427915	0.5994	0.6528	0.5086	0.0582	0.4622	0.6	0.69	0.52	0.07	0.5413	0.69	0.08	T	0.011	B	0.006	B	0.237	N	1.000	P	1.59	L	1.4	T	-0.904	T	0.000	T	0.031	2.088	12.94	0.549	-0.045	-0.107	4.332	2.087887	2.087887	0.16	0.595648	0.141458	NA	0.384	NA	6.5969854
992	6	17688798	17688798	G	A	exonic	NUP153	NA	synonymous SNV	NUP153:NM_005124:exon2:c.C163T:p.L55L	exonic	ENSG00000124789	NA	synonymous SNV	ENSG00000124789:ENST00000262077:exon2:c.C163T:p.L55L,ENSG00000124789:ENST00000537253:exon2:c.C163T:p.L55L	Score=550;Name=lod=230	NA	6p22.3	NA	NA	Name=19	NA	rs1065057	0.27	0.27	0.248	0.271965	0.4006	0.2431	0.3184	0.0431	0.4458	0.39	0.26	0.37	0.06	0.3154	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.301242	1.301242	NA	0.353953	0.092601	NA	0.232	NA	6.5967136
992	2	127956991	127956991	G	A	exonic	CYP27C1	NA	synonymous SNV	CYP27C1:NM_001001665:exon4:c.C513T:p.Y171Y	exonic	ENSG00000186684	NA	synonymous SNV	ENSG00000186684:ENST00000335247:exon4:c.C513T:p.Y171Y,ENSG00000186684:ENST00000409327:exon4:c.C513T:p.Y171Y	Score=452;Name=lod=92	NA	2q14.3	NA	NA	NA	NA	rs34225806	0.01	0.01	0.016	0.0091853	0.0298	NA	0.0202	0.0015	NA	0.03	NA	0.02	0.0041	0.0159	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.988945	NA	NA	0.024302	0.005674	NA	0.014	NA	6.5966646
992	21	47831522	47831522	G	A	exonic	PCNT	NA	synonymous SNV	PCNT:NM_006031:exon28:c.G5535A:p.R1845R	exonic	ENSG00000160299	NA	synonymous SNV	ENSG00000160299:ENST00000359568:exon28:c.G5535A:p.R1845R	Score=278;Name=lod=18	NA	21q22.3	NA	NA	NA	NA	rs61735543	0.07	0.07	0.071	0.0856629	0.0229	0.003	0.036	0.2224	0.0859	0.02	0.0017	0.04	0.24	0.036	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.059762	NA	NA	0.011517	0.170527	NA	0.087	NA	6.5962496
992	2	207041441	207041441	G	A	exonic	GPR1	NA	synonymous SNV	GPR1:NM_001098199:exon3:c.C531T:p.D177D,GPR1:NM_001261454:exon3:c.C531T:p.D177D,GPR1:NM_001261455:exon3:c.C531T:p.D177D,GPR1:NM_005279:exon3:c.C531T:p.D177D,GPR1:NM_001261452:exon4:c.C531T:p.D177D,GPR1:NM_001261453:exon4:c.C531T:p.D177D	exonic	ENSG00000183671	NA	synonymous SNV	ENSG00000183671:ENST00000407325:exon3:c.C531T:p.D177D,ENSG00000183671:ENST00000442134:exon3:c.C531T:p.D177D,ENSG00000183671:ENST00000451790:exon3:c.C531T:p.D177D,ENSG00000183671:ENST00000437420:exon4:c.C531T:p.D177D	Score=419;Name=lod=67	NA	2q33.3	Score=903;Name=V$STAT_01	NA	NA	NA	rs3732082	0.36	0.36	0.356	0.345248	0.3738	0.2569	0.3112	0.4531	0.2853	0.38	0.25	0.36	0.45	0.3501	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.47952	NA	NA	0.34686	0.444621	NA	0.319	NA	6.5959066
993	14	88431898	88431898	C	T	exonic	GALC	NA	synonymous SNV	GALC:NM_001201401:exon8:c.G915A:p.Q305Q,GALC:NM_000153:exon9:c.G984A:p.Q328Q,GALC:NM_001201402:exon9:c.G906A:p.Q302Q	exonic	ENSG00000054983	NA	synonymous SNV	ENSG00000054983:ENST00000555000:exon4:c.G351A:p.Q117Q,ENSG00000054983:ENST00000393568:exon8:c.G915A:p.Q305Q,ENSG00000054983:ENST00000261304:exon9:c.G984A:p.Q328Q,ENSG00000054983:ENST00000393569:exon9:c.G906A:p.Q302Q,ENSG00000054983:ENST00000544807:exon9:c.G816A:p.Q272Q	Score=419;Name=lod=67	NA	14q31.3	NA	NA	NA	NA	rs12888666	0.35	0.35	0.321	0.33107	0.3429	0.5327	0.4236	0.0794	0.3855	0.34	0.54	0.43	0.1	0.3813	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.106267	NA	NA	0.348152	0.118912	NA	0.413	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000078210.1;CLNDSDB=.;CLNDSDBID=.	6.5943146
993	1	68624878	68624878	C	T	exonic	WLS	NA	synonymous SNV	WLS:NM_001193334:exon2:c.G159A:p.A53A,WLS:NM_001002292:exon3:c.G426A:p.A142A,WLS:NM_024911:exon3:c.G432A:p.A144A	exonic	ENSG00000116729	NA	synonymous SNV	ENSG00000116729:ENST00000370976:exon2:c.G159A:p.A53A,ENSG00000116729:ENST00000533537:exon2:c.G33A:p.A11A,ENSG00000116729:ENST00000262348:exon3:c.G432A:p.A144A,ENSG00000116729:ENST00000354777:exon3:c.G426A:p.A142A,ENSG00000116729:ENST00000370973:exon3:c.G33A:p.A11A,ENSG00000116729:ENST00000471243:exon3:c.G297A:p.A99A,ENSG00000116729:ENST00000530486:exon3:c.G297A:p.A99A,ENSG00000116729:ENST00000540432:exon3:c.G432A:p.A144A	NA	NA	1p31.3	NA	Name=MafK_(ab50322)	NA	NA	rs3748705	0.37	0.37	0.332	0.349641	0.3648	0.4127	0.4524	0.2368	0.3487	0.36	0.42	0.48	0.27	0.3638	0.48	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-1.069	T	0.075	T	.	-1.027	0.224	1.98	-0.074	0.049	8.385	-1.02659	NA	NA	0.344302	0.252837	NA	0.29	NA	6.5937646
993	6	132966207	132966207	T	C	exonic	TAAR1	NA	synonymous SNV	TAAR1:NM_138327:exon1:c.A936G:p.R312R	exonic	ENSG00000146399	NA	synonymous SNV	ENSG00000146399:ENST00000275216:exon1:c.A936G:p.R312R	Score=463;Name=lod=102	NA	6q23.2	NA	NA	NA	NA	rs8192621	0.05	0.05	0.036	0.0461262	0.0219	0.1131	0.0432	0.0083	0.0552	0.02	0.13	0.05	0.01	0.0318	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.687499	NA	NA	0.019316	0.00522	NA	0.036	NA	6.5936506
993	14	74759301	74759301	G	T	exonic	ABCD4	NA	synonymous SNV	ABCD4:NM_005050:exon10:c.C981A:p.L327L	exonic	ENSG00000119688	NA	synonymous SNV	ENSG00000119688:ENST00000298816:exon8:c.C669A:p.L223L,ENSG00000119688:ENST00000356924:exon10:c.C981A:p.L327L	Score=610;Name=lod=401	NA	14q24.3	Score=844;Name=V$MEIS1AHOXA9_01	NA	NA	NA	rs4148078	0.26	0.26	0.279	0.262979	0.3857	0.247	0.2695	0.121	0.3405	0.37	0.24	0.29	0.11	0.3243	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.088192	NA	NA	0.363605	0.173627	NA	0.275	NA	6.5930616
993	17	46134798	46134798	C	T	exonic	NFE2L1	NA	synonymous SNV	NFE2L1:NM_003204:exon5:c.C906T:p.T302T	exonic	ENSG00000082641	NA	synonymous SNV	ENSG00000082641:ENST00000536222:exon3:c.C438T:p.T146T,ENSG00000082641:ENST00000577431:exon3:c.C405T:p.T135T,ENSG00000082641:ENST00000582155:exon3:c.C342T:p.T114T,ENSG00000082641:ENST00000583378:exon3:c.C309T:p.T103T,ENSG00000082641:ENST00000357480:exon4:c.C816T:p.T272T,ENSG00000082641:ENST00000361665:exon5:c.C873T:p.T291T,ENSG00000082641:ENST00000362042:exon5:c.C906T:p.T302T,ENSG00000082641:ENST00000585291:exon5:c.C816T:p.T272T	Score=478;Name=lod=117	NA	17q21.32	NA	NA	NA	NA	rs2229368	0.02	0.02	0.021	0.0175719	0.0249	0.001	0.0187	0.0295	0.0102	0.02	0.0017	0.02	0.03	0.02	0.042	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.022203	NA	NA	0.028837	0.041534	NA	0.022	NA	6.5929296
993	18	56204644	56204644	T	G	exonic	ALPK2	NA	synonymous SNV	ALPK2:NM_052947:exon5:c.A2775C:p.V925V	exonic	ENSG00000198796	NA	synonymous SNV	ENSG00000198796:ENST00000361673:exon5:c.A2775C:p.V925V	NA	NA	18q21.32	NA	Name=Pol2-4H8	Name=3	NA	rs12963422	0.33	0.33	0.283	0.33746	0.3221	0.5734	0.3184	0.0696	0.4857	0.3	0.59	0.28	0.09	0.3815	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.599624	NA	NA	0.370581	0.125057	NA	0.196	NA	6.5924856
993	11	18231289	18231289	C	A	ncRNA_exonic	LOC494141	NA	NA	NA	exonic	ENSG00000189332	NA	nonsynonymous SNV	ENSG00000189332:ENST00000527059:exon1:c.C75A:p.F25L,ENSG00000189332:ENST00000340135:exon2:c.C75A:p.F25L,ENSG00000189332:ENST00000534640:exon2:c.C75A:p.F25L	NA	NA	11p15.1	NA	NA	NA	NA	rs4757627	0.27	0.27	0.241	0.259984	0.4881	0.0456	0.304	0.1762	0.3282	0.49	0.02	0.32	0.18	0.4195	0.49	0.67	T	.	.	.	.	0.530	N	.	.	.	.	-0.6	T	-0.995	T	0.000	T	0.131	0.941	8.834	0.742	0.654	2.541	7.271	0.940531	NA	0.1	NA	NA	ID=COSM1507438;OCCURENCE=1(lung)	0.283	NA	6.5924
993	3	195395515	195395515	A	C	ncRNA_intronic	SDHAP2	NA	NA	NA	ncRNA_intronic	ENSG00000215837,ENSG00000242086	NA	NA	NA	Score=633;Name=lod=498	NA	3q29	Score=897;Name=V$AREB6_01	NA	NA	NA	rs202131384	NA	NA	0.025	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0744	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.252739	NA	NA	NA	NA	NA	NA	NA	6.5922666
993	16	25268368	25268368	A	G	exonic	ZKSCAN2	NA	synonymous SNV	ZKSCAN2:NM_001012981:exon1:c.T81C:p.P27P	exonic	ENSG00000155592	NA	synonymous SNV	ENSG00000155592:ENST00000328086:exon1:c.T81C:p.P27P,ENSG00000155592:ENST00000569150:exon1:c.T81C:p.P27P	NA	NA	16p12.1	NA	Name=YY1,Sin3Ak-20,CTCF	Name=20	NA	rs4787310	0.44	0.44	0.42	0.461062	0.338	0.4722	0.4481	0.6346	0.3507	0.33	0.45	0.43	0.61	0.3829	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.877983	1.877983	NA	0.35407	0.590806	ID=COSM148057;OCCURENCE=1(stomach)	0.457	NA	6.5916966
993	1	1226690	1226690	C	T	exonic	SCNN1D	NA	synonymous SNV	SCNN1D:NM_001130413:exon18:c.C2109T:p.S703S	exonic	ENSG00000162572	NA	synonymous SNV	ENSG00000162572:ENST00000400928:exon14:c.C1617T:p.S539S,ENSG00000162572:ENST00000325425:exon15:c.C1815T:p.S605S,ENSG00000162572:ENST00000338555:exon15:c.C1617T:p.S539S,ENSG00000162572:ENST00000379116:exon18:c.C2109T:p.S703S	NA	NA	1p36.33	NA	NA	Name=18	NA	rs114720027	0.01	0.01	0.011	0.00738818	0.0159	NA	0.0043	NA	0.0184	0.02	NA	0.01	NA	0.032	0.027	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.658246	NA	NA	0.027217	0.004462	NA	0.007	NA	6.5915496
993	19	49230379	49230379	A	G	exonic	RASIP1	NA	synonymous SNV	RASIP1:NM_017805:exon7:c.T1908C:p.P636P	exonic	ENSG00000105538	NA	synonymous SNV	ENSG00000105538:ENST00000222145:exon7:c.T1908C:p.P636P	NA	NA	19q13.33	Score=820;Name=V$ARP1_01	NA	NA	NA	rs640794	0.1	0.1	0.103	0.131589	0.0119	NA	0.0461	0.4266	0.0521	0.01	NA	0.06	0.4	0.0496	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.273281	1.273281	NA	0.01407	0.364276	NA	0.138	NA	6.5910966
993	12	19282670	19282670	C	T	UTR5	PLEKHA5	NM_001256470:c.-64C>T,NM_001143821:c.-64C>T,NM_001190860:c.-64C>T,NM_019012:c.-64C>T	NA	NA	UTR5	ENSG00000052126	ENST00000309364:c.-64C>T,ENST00000359180:c.-64C>T,ENST00000355397:c.-64C>T,ENST00000317589:c.-64C>T	NA	NA	Score=399;Name=lod=56	NA	12p12.3	NA	Name=CCNT2,HEY1,Pol2-4H8,YY1_(C-20),Pol2,TAF1	Name=132	NA	rs28512290	0.54	0.54	0.558	0.432508	0.7425	0.3522	0.5447	0.1452	0.5051	0.75	0.52	0.6	0.2	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.780228	1.780228	NA	NA	NA	NA	NA	NA	6.5908334
993	11	71548520	71548520	A	T	exonic	DEFB108B	NA	nonsynonymous SNV	DEFB108B:NM_001002035:exon2:c.A134T:p.H45L	exonic	ENSG00000184276	NA	nonsynonymous SNV	ENSG00000184276:ENST00000328698:exon2:c.A134T:p.H45L	NA	NA	11q13.4	NA	NA	NA	NA	rs12285495	0.47	0.47	0.422	0.450479	0.5984	0.3631	0.3732	0.3427	0.589	0.61	0.37	0.44	0.39	0.5372	0.61	0.01	D	0.001	B	0.001	B	0.628	N	1.000	P	.	.	2.85	T	-0.987	T	0.000	T	0.122	1.47	10.86	0.238	0.055	0.195	3.446	1.470492	1.470492	0.02	0.607151	0.382273	NA	0.116	NA	6.5905824
993	13	101720300	101720300	T	G	exonic	NALCN	NA	synonymous SNV	NALCN:NM_052867:exon39:c.A4416C:p.I1472I	exonic	ENSG00000102452	NA	synonymous SNV	ENSG00000102452:ENST00000251127:exon39:c.A4416C:p.I1472I	Score=605;Name=lod=383	NA	13q33.1	NA	NA	NA	Score=194;Name=672288_1_-_194	rs1289556	0.37	0.37	0.392	0.402955	0.3608	0.1171	0.2752	0.7519	0.3599	0.36	0.14	0.29	0.73	0.3529	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.955426	NA	NA	0.362558	0.716977	NA	0.442	NA	6.5904086
993	21	47695220	47695220	A	G	exonic	MCM3AP	NA	synonymous SNV	MCM3AP:NM_003906:exon6:c.T1878C:p.D626D	exonic	ENSG00000160294	NA	synonymous SNV	ENSG00000160294:ENST00000291688:exon6:c.T1878C:p.D626D,ENSG00000160294:ENST00000397708:exon7:c.T1878C:p.D626D	Score=433;Name=lod=77	NA	21q22.3	NA	NA	NA	NA	rs2839190	0.11	0.11	0.114	0.139776	0.0129	0.004	0.0591	0.4251	0.0818	0.01	0.0035	0.06	0.41	0.0505	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.886381	NA	NA	0.013256	0.358829	NA	0.123	NA	6.5900106
993	16	767096	767096	C	G	exonic	METRN	NA	synonymous SNV	METRN:NM_024042:exon4:c.C591G:p.V197V	exonic	ENSG00000103260	NA	synonymous SNV	ENSG00000103260:ENST00000568415:exon3:c.C192G:p.V64V,ENSG00000103260:ENST00000568223:exon4:c.C591G:p.V197V	NA	NA	16p13.3	NA	Name=Pol2	NA	NA	rs11553170	0.01	0.01	0.006	0.00898562	0.0258	0.001	0.0086	0.003	0.0082	0.02	0.0017	0.01	0.002	0.0206	0.031	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.194446	NA	NA	0.030631	0.006834	NA	NA	NA	6.5896356
993	10	124742792	124742792	G	A	exonic	PSTK	NA	synonymous SNV	PSTK:NM_153336:exon3:c.G513A:p.S171S	exonic	ENSG00000179988	NA	synonymous SNV	ENSG00000179988:ENST00000368887:exon3:c.G513A:p.S171S,ENSG00000179988:ENST00000405485:exon3:c.G513A:p.S171S	NA	NA	10q26.13	NA	NA	NA	NA	rs3736583	0.59	0.59	0.603	0.581669	0.7296	0.3919	0.5576	0.6589	0.5378	0.73	0.38	0.59	0.63	0.637	0.73	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.091	T	0.000	T	.	0.476	6.582	-11.7	-2.588	-2.635	15.095	0.475645	NA	NA	0.71093	0.644803	ID=COSM147076;OCCURENCE=1(stomach)	0.601	NA	6.5891366
993	3	14199887	14199887	G	A	exonic	XPC	NA	nonsynonymous SNV	XPC:NM_001145769:exon9:c.C1385T:p.A462V,XPC:NM_004628:exon9:c.C1496T:p.A499V	exonic	ENSG00000154767	NA	nonsynonymous SNV	ENSG00000154767:ENST00000285021:exon9:c.C1496T:p.A499V,ENSG00000154767:ENST00000449060:exon9:c.C1385T:p.A462V	NA	NA	3p25.1	NA	NA	NA	NA	rs2228000	0.25	0.25	0.223	0.233027	0.2584	0.4127	0.245	0.093	0.2025	0.26	0.37	0.26	0.08	0.2378	0.37	0.27	T	0.081	B	0.027	B	0.528	N	1.000	P	0.69	N	1.26	T	-0.924	T	0.000	T	0.201	0.991	9.045	-1.03	-0.927	.	4.613	0.990686	NA	0.18	0.248185	0.091837	NA	0.21	NA	6.5889484
993	16	1820992	1820992	T	A	exonic	NME3	NA	synonymous SNV	NME3:NM_002513:exon4:c.A282T:p.V94V	exonic	ENSG00000103024	NA	nonsynonymous SNV	ENSG00000103024:ENST00000564628:exon4:c.A254T:p.Y85F	Score=474;Name=lod=113	NA	16p13.3	NA	Name=Pol2-4H8,NFKB,HMGN3,Pol2	Name=121	NA	rs11890	0.76	0.76	0.768	0.763578	0.7903	0.6369	0.8761	0.848	0.6728	0.79	0.61	0.86	0.8	0.7912	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.791321	NA	NA	0.829886	0.858706	NA	0.652	NA	6.588614
993	20	854940	854940	T	C	exonic	ANGPT4	NA	synonymous SNV	ANGPT4:NM_015985:exon8:c.A1338G:p.Q446Q	exonic	ENSG00000101280	NA	synonymous SNV	ENSG00000101280:ENST00000381922:exon8:c.A1338G:p.Q446Q	Score=493;Name=lod=135	NA	20p13	Score=777;Name=V$HEN1_01	NA	NA	NA	rs944110	0.49	0.49	0.472	0.512979	0.3191	0.6905	0.4337	0.5227	0.5726	0.33	0.7	0.43	0.54	0.4242	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.585379	NA	NA	0.334767	0.500454	ID=COSM1178466;OCCURENCE=1(prostate),1(large_intestine)	0.587	NA	6.5885996
993	16	11001821	11001821	C	T	exonic	CIITA	NA	synonymous SNV	CIITA:NM_000246:exon11:c.C2472T:p.H824H	exonic	ENSG00000179583	NA	synonymous SNV	ENSG00000179583:ENST00000324288:exon11:c.C2472T:p.H824H	Score=329;Name=lod=29	NA	16p13.13	NA	NA	NA	NA	rs45621432	0.01	0.01	0.005	0.00778754	0.0328	NA	0.0058	NA	0.002	0.04	NA	0.01	NA	0.0218	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.69945	NA	NA	0.023726	0.004781	NA	0.007	NA	6.5883406
993	6	4892081	4892081	C	T	exonic	CDYL	NA	synonymous SNV	CDYL:NM_004824:exon2:c.C159T:p.H53H	exonic	ENSG00000153046	NA	synonymous SNV	ENSG00000153046:ENST00000397588:exon2:c.C159T:p.H53H,ENSG00000153046:ENST00000328908:exon4:c.C321T:p.H107H	Score=466;Name=lod=104	NA	6p25.1	NA	NA	NA	NA	rs61749071	0.01	0.01	0.012	0.00738818	0.0268	NA	0.0086	0.0023	0.001	0.03	NA	0.01	0.002	0.0208	0.031	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.18215	NA	NA	0.030814	0.006582	NA	0.014	NA	6.5882526
993	6	30892322	30892322	C	T	exonic	VARS2	NA	synonymous SNV	VARS2:NM_001167733:exon25:c.C2238T:p.P746P,VARS2:NM_001167734:exon26:c.C2748T:p.P916P,VARS2:NM_020442:exon26:c.C2658T:p.P886P	exonic	ENSG00000137411	NA	synonymous SNV	ENSG00000137411:ENST00000321897:exon25:c.C2658T:p.P886P,ENSG00000137411:ENST00000542001:exon25:c.C2238T:p.P746P,ENSG00000137411:ENST00000416670:exon26:c.C2658T:p.P886P,ENSG00000137411:ENST00000541562:exon26:c.C2748T:p.P916P	Score=457;Name=lod=96	NA	6p21.33	Score=873;Name=V$MZF1_02	NA	NA	NA	rs2532942	0.24	0.24	0.244	0.222045	0.3559	0.247	0.2075	0.0983	0.2362	0.35	0.28	0.2	0.06	0.3446	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.176735	NA	NA	0.378279	0.146746	NA	0.275	NA	6.5878876
993	4	109769942	109769942	T	C	exonic	COL25A1	NA	synonymous SNV	COL25A1:NM_001256074:exon23:c.A1326G:p.P442P,COL25A1:NM_032518:exon26:c.A1407G:p.P469P,COL25A1:NM_198721:exon26:c.A1407G:p.P469P	exonic	ENSG00000188517	NA	synonymous SNV	ENSG00000188517:ENST00000399127:exon24:c.A1326G:p.P442P,ENSG00000188517:ENST00000494183:exon24:c.A1191G:p.P397P,ENSG00000188517:ENST00000399126:exon27:c.A1407G:p.P469P,ENSG00000188517:ENST00000399132:exon27:c.A1407G:p.P469P	Score=482;Name=lod=121	NA	4q25	NA	NA	NA	NA	rs112032233	0.01	0.01	0.009	0.00938498	0.0308	NA	NA	0.0023	0.0133	0.03	NA	0.0028	0.002	0.0186	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.539181	NA	NA	0.03024	0.00518	ID=COSM328152;OCCURENCE=1(pancreas)	NA	NA	6.5870266
993	17	37417575	37417575	C	G	UTR3	FBXL20	NM_001184906:c.*138G>C,NM_032875:c.*138G>C	NA	NA	UTR3	ENSG00000108306	ENST00000264658:c.*138G>C,ENST00000394294:c.*138G>C	NA	NA	Score=403;Name=lod=58	NA	17q12	Score=835;Name=V$HAND1E47_01	Name=CTCF	NA	NA	rs3744348	0.61	0.61	0.585	0.620407	0.7475	0.7371	0.6542	0.2156	0.8926	0.75	0.75	0.67	0.21	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.113404	NA	NA	NA	NA	NA	0.543	NA	6.5858334
994	2	198257795	198257795	T	C	exonic	SF3B1	NA	synonymous SNV	SF3B1:NM_012433:exon24:c.A3657G:p.V1219V	exonic	ENSG00000115524	NA	synonymous SNV	ENSG00000115524:ENST00000335508:exon24:c.A3657G:p.V1219V	Score=680;Name=lod=772	NA	2q33.1	NA	NA	NA	NA	rs4685	0.71	0.71	0.757	0.71845	0.7256	0.5218	0.6311	0.8835	0.7526	0.72	0.6	0.64	0.88	0.6717	0.88	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.051	T	0.000	T	.	0.966	8.941	3.21	0.660	0.206	9.175	0.965705	NA	NA	0.685233	0.834998	NA	0.725	NA	6.5841336
994	8	145161823	145161823	G	A	exonic	MAF1	NA	nonsynonymous SNV	MAF1:NM_032272:exon7:c.G706A:p.G236R	exonic	ENSG00000179632	NA	nonsynonymous SNV	ENSG00000179632:ENST00000534811:exon2:c.G160A:p.G54R,ENSG00000179632:ENST00000534585:exon6:c.G796A:p.G266R,ENSG00000179632:ENST00000322428:exon7:c.G706A:p.G236R,ENSG00000179632:ENST00000532522:exon7:c.G706A:p.G236R	NA	NA	8q24.3	NA	NA	NA	NA	rs11546144	0.89	0.89	0.877	0.884385	0.9105	0.999	0.9366	0.6876	0.9683	0.91	1	0.93	0.69	0.9205	1	0.7	T	0.0	B	0.0	B	0.244	N	0.996	P	0.345	N	-1.54	D	-0.984	T	0.000	T	0.07	0.182	4.978	0.43	-0.072	1.526	6.749	0.181685	NA	0.02	0.918412	0.719845	NA	0.87	NA	6.5839214
994	19	19625547	19625547	A	G	exonic	TSSK6	NA	synonymous SNV	TSSK6:NM_032037:exon1:c.T690C:p.Y230Y	exonic	ENSG00000178093	NA	synonymous SNV	ENSG00000178093:ENST00000360913:exon1:c.T690C:p.Y230Y,ENSG00000178093:ENST00000585580:exon1:c.T690C:p.Y230Y,ENSG00000178093:ENST00000587522:exon1:c.T690C:p.Y230Y,ENSG00000178093:ENST00000602623:exon1:c.T198C:p.Y66Y	Score=503;Name=lod=147	NA	19p13.11	NA	NA	Name=71	NA	rs7250893	0.42	0.42	0.409	0.474042	0.325	0.3194	0.4798	0.6573	0.5348	0.32	0.31	0.46	0.66	0.4084	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.720488	NA	NA	0.349522	0.619145	ID=COSM439019;OCCURENCE=1(breast)	0.152	NA	6.5837446
994	16	57954448	57954448	A	G	exonic	CNGB1	NA	synonymous SNV	CNGB1:NM_001297:exon19:c.T1644C:p.D548D	exonic	ENSG00000070729	NA	synonymous SNV	ENSG00000070729:ENST00000251102:exon19:c.T1644C:p.D548D,ENSG00000070729:ENST00000564448:exon19:c.T1626C:p.D542D	NA	NA	16q21	Score=771;Name=V$LUN1_01	NA	NA	NA	rs2161703	0.1	0.1	0.119	0.120407	0.0268	NA	0.0403	0.4092	0.0072	0.02	NA	0.04	0.39	0.0412	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.540517	NA	NA	0.015018	0.338996	NA	0.203	NA	6.5836486
994	9	132637712	132637712	G	A	exonic	USP20	NA	synonymous SNV	USP20:NM_001008563:exon20:c.G2172A:p.A724A,USP20:NM_001110303:exon20:c.G2172A:p.A724A,USP20:NM_006676:exon20:c.G2172A:p.A724A	exonic	ENSG00000136878	NA	synonymous SNV	ENSG00000136878:ENST00000315480:exon20:c.G2172A:p.A724A,ENSG00000136878:ENST00000358355:exon20:c.G2172A:p.A724A,ENSG00000136878:ENST00000372429:exon20:c.G2172A:p.A724A	NA	NA	9q34.11	NA	Name=Rad21,CTCF	Name=6	NA	rs735115	0.25	0.25	0.235	0.207867	0.4066	0.1885	0.2522	0.0507	0.2045	0.41	0.2	0.28	0.05	0.3127	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.80682	NA	NA	0.364176	0.094308	NA	0.188	NA	6.5831906
994	2	128177377	128177377	C	T	intronic	PROC	NA	NA	NA	UTR5	ENSG00000115718	ENST00000427769:c.-142C>T,ENST00000431364:c.-142C>T	NA	NA	NA	Name=Protein C levels	2q14.3	NA	Name=Pol2,HEY1	Name=2	NA	rs1158867	0.62	0.62	0.544	0.568291	0.5835	0.8194	0.7089	0.2511	0.6227	0.6	0.85	0.69	0.32	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.301987	NA	NA	NA	NA	NA	0.428	NA	6.5831667
994	19	19606634	19606634	G	A	exonic	GATAD2A	NA	synonymous SNV	GATAD2A:NM_017660:exon6:c.G696A:p.S232S	exonic	ENSG00000167491	NA	synonymous SNV	ENSG00000167491:ENST00000429563:exon3:c.G177A:p.S59S,ENSG00000167491:ENST00000252577:exon6:c.G696A:p.S232S,ENSG00000167491:ENST00000358713:exon6:c.G696A:p.S232S,ENSG00000167491:ENST00000360315:exon6:c.G696A:p.S232S,ENSG00000167491:ENST00000404158:exon8:c.G696A:p.S232S	Score=352;Name=lod=36	NA	19p13.11	Score=766;Name=V$HEN1_02	NA	NA	NA	rs1047361	0.42	0.42	0.417	0.474241	0.325	0.3194	0.4798	0.6566	0.5368	0.32	0.31	0.46	0.66	0.4064	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.491428	1.491428	NA	0.352442	0.620291	NA	0.413	NA	6.5828246
994	19	48525507	48525507	G	A	exonic	ELSPBP1	NA	nonsynonymous SNV	ELSPBP1:NM_022142:exon6:c.G595A:p.E199K	exonic	ENSG00000169393	NA	nonsynonymous SNV	ENSG00000169393:ENST00000593413:exon2:c.G154A:p.E52K,ENSG00000169393:ENST00000597519:exon3:c.G151A:p.E51K,ENSG00000169393:ENST00000339841:exon6:c.G595A:p.E199K	NA	Name=Intelligence	19q13.33	NA	NA	NA	NA	rs2303690	0.69	0.69	0.66	0.685304	0.5696	0.8671	0.719	0.6672	0.6176	0.59	0.87	0.67	0.66	0.6144	0.87	1	T	0.011	B	0.014	B	0.017	N	1.000	P	0.57	N	0.67	T	-0.931	T	0.000	T	0.044	-0.539	1.554	1.54	0.108	0.521	3.805	-0.538579	NA	0.47	0.567326	0.612574	ID=COSM1179786;OCCURENCE=1(prostate)	0.536	NA	6.5820074
994	6	158663495	158663495	C	T	intergenic	GTF2H5,TULP4	dist=43119;dist=70197	NA	NA	ncRNA_exonic	ENSG00000188451	NA	NA	NA	Score=603;Name=lod=377	NA	6q25.3	NA	Name=SETDB1,KAP1	Name=98	NA	rs3812101	0.37	0.37	0.352	0.330671	0.4185	0.4573	0.4611	0.1044	0.3231	0.43	0.47	0.43	0.13	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.696141	NA	NA	NA	NA	NA	0.384	NA	6.5815
994	4	10447168	10447168	C	G	exonic	ZNF518B	NA	nonsynonymous SNV	ZNF518B:NM_053042:exon3:c.G785C:p.G262A	exonic	ENSG00000178163	NA	nonsynonymous SNV	ENSG00000178163:ENST00000326756:exon3:c.G785C:p.G262A	NA	NA	4p16.1	NA	NA	NA	NA	rs66538112	0.2	0.2	0.183	0.191094	0.2435	0.2063	0.2767	0.0764	0.2157	0.25	0.21	0.23	0.09	0.2497	0.26	0.66	T	0.0	B	0.0	B	0.744	N	1.000	P	-0.345	N	4.92	T	-0.984	T	0.000	T	0.007	2.518	14.38	1.25	0.486	0.168	6.001	2.518259	2.518259	0.63	0.258721	0.110304	NA	0.196	NA	6.5814124
994	7	86813831	86813831	C	G	exonic	DMTF1	NA	synonymous SNV	DMTF1:NM_001142326:exon10:c.C675G:p.V225V,DMTF1:NM_001142327:exon11:c.C939G:p.V313V,DMTF1:NM_021145:exon13:c.C939G:p.V313V	exonic	ENSG00000135164	NA	synonymous SNV	ENSG00000135164:ENST00000432937:exon10:c.C675G:p.V225V,ENSG00000135164:ENST00000547146:exon10:c.C939G:p.V313V,ENSG00000135164:ENST00000579850:exon10:c.C816G:p.V272V,ENSG00000135164:ENST00000331242:exon11:c.C939G:p.V313V,ENSG00000135164:ENST00000413276:exon11:c.C939G:p.V313V,ENSG00000135164:ENST00000414194:exon11:c.C141G:p.V47V,ENSG00000135164:ENST00000394703:exon13:c.C939G:p.V313V	Score=759;Name=lod=1621	NA	7q21.12	NA	NA	NA	NA	rs11974238	0.04	0.04	0.039	0.034345	0.0268	0.0635	0.0115	0.0492	0.0082	0.03	0.06	0.01	0.05	0.0297	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.917415	NA	NA	0.028953	0.04857	NA	0.116	NA	6.5812136
994	13	96601679	96601679	C	T	exonic	UGGT2	NA	synonymous SNV	UGGT2:NM_020121:exon13:c.G1365A:p.L455L	exonic	ENSG00000102595	NA	synonymous SNV	ENSG00000102595:ENST00000376747:exon13:c.G1365A:p.L455L	Score=259;Name=lod=15	NA	13q32.1	NA	NA	NA	NA	rs35405829	0.09	0.09	0.072	0.0884585	0.0179	0.1399	0.0346	0.1233	0.0992	0.02	0.15	0.04	0.14	0.0495	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.179657	NA	NA	0.018144	0.11376	NA	0.058	NA	6.5811226
994	7	30671087	30671087	T	C	exonic	GARS	NA	synonymous SNV	GARS:NM_002047:exon15:c.T1833C:p.V611V	exonic	ENSG00000106105	NA	synonymous SNV	ENSG00000106105:ENST00000389266:exon15:c.T1833C:p.V611V	NA	NA	7p14.3	Score=897;Name=V$CEBPB_02	NA	NA	NA	rs14270	0.03	0.03	0.02	0.0251597	0.0278	NA	0.0288	0.059	NA	0.03	NA	0.02	0.06	0.0253	0.072	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.882563	NA	NA	0.032673	0.072126	ID=COSM1450343;OCCURENCE=1(large_intestine)	0.043	NA	6.5808936
994	10	79576772	79576772	G	A	exonic	DLG5	NA	synonymous SNV	DLG5:NM_004747:exon19:c.C3867T:p.S1289S	exonic	ENSG00000151208	NA	synonymous SNV	ENSG00000151208:ENST00000424842:exon7:c.C750T:p.S250S,ENSG00000151208:ENST00000372388:exon18:c.C2847T:p.S949S,ENSG00000151208:ENST00000372391:exon19:c.C3867T:p.S1289S	Score=484;Name=lod=124	NA	10q22.3	NA	NA	NA	NA	rs35837544	0.01	0.01	0.011	0.0169728	0.0209	0.003	0.0259	NA	0.044	0.02	0.0035	0.03	NA	0.0303	0.035	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.693186	NA	NA	0.034767	0.007036	NA	0.007	NA	6.5806996
994	9	100234756	100234756	G	A	exonic	TDRD7	NA	synonymous SNV	TDRD7:NM_014290:exon10:c.G1923A:p.K641K	exonic	ENSG00000196116	NA	synonymous SNV	ENSG00000196116:ENST00000422139:exon9:c.G1701A:p.K567K,ENSG00000196116:ENST00000355295:exon10:c.G1923A:p.K641K	Score=496;Name=lod=138	NA	9q22.33	NA	NA	NA	NA	rs41281938	0.03	0.03	0.03	0.0435304	0.0258	0.001	0.0202	0.1112	0.0307	0.03	0.0017	0.02	0.08	0.0307	0.083	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.910828	NA	NA	0.029651	0.082842	NA	0.043	NA	6.5805156
994	19	57036012	57036012	G	T	exonic	ZNF471	NA	nonsynonymous SNV	ZNF471:NM_020813:exon5:c.G576T:p.M192I	exonic	ENSG00000196263	NA	nonsynonymous SNV	ENSG00000196263:ENST00000308031:exon5:c.G576T:p.M192I	NA	NA	19q13.43	NA	NA	NA	NA	rs11667052	0.2	0.2	0.192	0.183706	0.2813	0.0526	0.1398	0.2337	0.182	0.28	0.06	0.16	0.24	0.2201	0.28	0.38	T	0.0	B	0.001	B	.	.	1.000	P	-1.545	N	2.5	T	-0.921	T	0.000	T	0.066	-0.608	1.29	1.71	0.427	.	6.935	-0.607754	NA	0.49	0.25169	0.22874	NA	0.268	NA	6.5802434
994	19	621076	621076	G	A	exonic	POLRMT	NA	synonymous SNV	POLRMT:NM_005035:exon10:c.C2622T:p.S874S	exonic	ENSG00000099821	NA	synonymous SNV	ENSG00000099821:ENST00000588649:exon10:c.C2622T:p.S874S	NA	NA	19p13.3	NA	NA	NA	Score=86;Name=1109569_0_+_86	rs1804751	0.02	0.02	0.017	0.0155751	0.0278	0.002	0.0274	0.0121	0.0133	0.02	0.0035	0.02	0.02	0.0249	0.034	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.595117	NA	NA	0.033845	0.017508	NA	0.007	NA	6.5801216
994	8	144999684	144999684	A	G	exonic	PLEC	NA	synonymous SNV	PLEC:NM_201378:exon31:c.T4371C:p.A1457A,PLEC:NM_201379:exon31:c.T4347C:p.A1449A,PLEC:NM_201380:exon31:c.T4824C:p.A1608A,PLEC:NM_201381:exon31:c.T4317C:p.A1439A,PLEC:NM_201382:exon31:c.T4413C:p.A1471A,PLEC:NM_201383:exon31:c.T4425C:p.A1475A,PLEC:NM_201384:exon31:c.T4413C:p.A1471A,PLEC:NM_000445:exon32:c.T4494C:p.A1498A	exonic	ENSG00000178209	NA	synonymous SNV	ENSG00000178209:ENST00000322810:exon31:c.T4824C:p.A1608A,ENSG00000178209:ENST00000345136:exon31:c.T4413C:p.A1471A,ENSG00000178209:ENST00000354589:exon31:c.T4413C:p.A1471A,ENSG00000178209:ENST00000354958:exon31:c.T4347C:p.A1449A,ENSG00000178209:ENST00000356346:exon31:c.T4371C:p.A1457A,ENSG00000178209:ENST00000357649:exon31:c.T4425C:p.A1475A,ENSG00000178209:ENST00000398774:exon31:c.T4317C:p.A1439A,ENSG00000178209:ENST00000527096:exon31:c.T4482C:p.A1494A,ENSG00000178209:ENST00000436759:exon32:c.T4494C:p.A1498A	NA	NA	8q24.3	Score=784;Name=V$PAX5_01	NA	NA	NA	rs35916068	0.25	0.25	0.199	0.232628	0.4274	0.1429	0.2968	0.034	0.3476	0.42	0.16	0.3	0.04	0.3356	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.148597	NA	NA	0.324104	0.071235	NA	0.116	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000078865.3;CLNDSDB=.;CLNDSDBID=.	6.5795626
994	12	53517552	53517552	G	A	exonic	SOAT2	NA	synonymous SNV	SOAT2:NM_003578:exon14:c.G1413A:p.P471P	exonic	ENSG00000167780	NA	synonymous SNV	ENSG00000167780:ENST00000301466:exon14:c.G1413A:p.P471P	NA	NA	12q13.13	NA	NA	Name=3	NA	rs55773507	0.02	0.02	0.011	0.0121805	0.0278	0.003	0.0403	0.0015	NA	0.03	0.0017	0.04	0.0041	0.024	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.507286	NA	NA	0.035814	0.007263	NA	0.094	NA	6.5790526
994	11	1643228	1643228	G	A	exonic	KRTAP5-4	NA	synonymous SNV	KRTAP5-4:NM_001012709:exon1:c.C96T:p.G32G	exonic	ENSG00000241598	NA	synonymous SNV	ENSG00000241598:ENST00000399682:exon1:c.C96T:p.G32G	Score=571;Name=lod=279	NA	11p15.5	Score=867;Name=V$SPZ1_01	NA	NA	NA	rs61867574	0.43	0.43	0.341	0.511581	0.5427	0.377	0.4625	0.6142	0.5143	0.45	0.37	0.45	0.47	0.545	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.05601	NA	NA	NA	NA	NA	0.196	NA	6.5789666
994	8	18258316	18258316	G	A	exonic	NAT2	NA	nonsynonymous SNV	NAT2:NM_000015:exon2:c.G803A:p.R268K	exonic	ENSG00000156006	NA	nonsynonymous SNV	ENSG00000156006:ENST00000286479:exon2:c.G803A:p.R268K,ENSG00000156006:ENST00000520116:exon2:c.G413A:p.R138K	NA	NA	8p22	NA	NA	NA	NA	rs1208	0.68	0.68	0.682	0.677117	0.5616	0.9603	0.6268	0.6051	0.637	0.56	0.97	0.6	0.6	0.6172	0.97	1	T	0.0	B	0.002	B	0.105	N	1.000	P	.	.	4.7	T	-0.997	T	0.000	T	0.032	-2.883	0.001	1.54	0.047	0.588	4.697	-2.883121	NA	1	0.575832	0.600545	NA	0.674	CLINSIG=drug-response;CLNDBN=Slow_acetylator_due_to_N-acetyltransferase_enzyme_variant;CLNREVSTAT=single;CLNACC=RCV000000760.1;CLNDSDB=MedGen:OMIM:SNOMED_CT;CLNDSDBID=C1827377:243400:425079005	6.5787014
994	7	139724555	139724555	C	G	exonic	PARP12	NA	synonymous SNV	PARP12:NM_022750:exon12:c.G1911C:p.P637P	exonic	ENSG00000059378	NA	synonymous SNV	ENSG00000059378:ENST00000263549:exon12:c.G1911C:p.P637P	Score=410;Name=lod=62	NA	7q34	NA	NA	NA	NA	rs3735352	NA	NA	NA	0.0734824	0.0408	NA	0.0389	0.205	0.0297	NA	NA	NA	NA	0.0479	0.076	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.119501	NA	NA	NA	NA	NA	0.072	NA	6.5779666
994	22	25833596	25833596	C	T	intergenic	LRP5L,CRYBB2P1	dist=56052;dist=10458	NA	NA	ncRNA_exonic	ENSG00000271138	NA	NA	NA	Score=371;Name=lod=43	NA	22q11.23	NA	Name=MafK_(SC-477),MafK_(ab50322)	Name=5	NA	rs510618	0.47	0.47	0.445	0.458866	0.4225	0.7351	0.5187	0.1362	0.6053	0.44	0.76	0.53	0.14	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.367089	NA	NA	NA	NA	NA	0.37	NA	6.5775
994	3	98304467	98304467	T	C	exonic	CPOX	NA	synonymous SNV	CPOX:NM_000097:exon5:c.A990G:p.E330E	exonic	ENSG00000080819	NA	synonymous SNV	ENSG00000080819:ENST00000264193:exon5:c.A990G:p.E330E	Score=551;Name=lod=231	NA	3q12.1	NA	Name=c-Fos,c-Jun,TCF4,GATA-1,TBP	Name=91	NA	rs1729995	0.76	0.76	0.773	0.753994	0.7048	0.7321	0.6744	0.8986	0.6881	0.71	0.76	0.72	0.89	0.7065	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.184442	NA	NA	0.678256	0.871993	NA	0.855	NA	6.5771106
994	2	70096862	70096862	T	C	exonic	GMCL1	NA	synonymous SNV	GMCL1:NM_178439:exon12:c.T1230C:p.R410R	exonic	ENSG00000087338	NA	synonymous SNV	ENSG00000087338:ENST00000282570:exon12:c.T1230C:p.R410R	Score=683;Name=lod=793	NA	2p13.3	NA	NA	NA	NA	rs114517801	0.01	0.01	0.012	0.0105831	0.0268	0.001	0.0231	0.0015	0.0072	0.02	NA	0.02	NA	0.0262	0.037	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.046815	NA	NA	0.037326	0.009305	NA	NA	NA	6.5763406
994	12	29639186	29639186	T	C	exonic	OVCH1	NA	nonsynonymous SNV	OVCH1:NM_183378:exon8:c.A988G:p.K330E	exonic	ENSG00000187950	NA	nonsynonymous SNV	ENSG00000187950:ENST00000318184:exon8:c.A988G:p.K330E	NA	NA	12p11.22	NA	NA	NA	NA	rs3847680	0.63	0.63	0.661	0.615415	0.6044	0.7331	0.4813	0.6778	0.5164	0.59	0.75	0.47	0.68	0.5685	0.75	0.58	T	0.0	B	0.0	B	.	.	1.000	P	0	N	-2.07	D	-0.946	T	0.000	T	0.025	-2.07	0.006	1.03	-0.006	-0.432	4.328	-2.069785	NA	0.91	0.584351	0.659326	NA	0.71	NA	6.5760824
994	5	108672946	108672946	C	T	exonic	PJA2	NA	nonsynonymous SNV	PJA2:NM_014819:exon10:c.G2113A:p.A705T	exonic	ENSG00000198961	NA	nonsynonymous SNV	ENSG00000198961:ENST00000361557:exon9:c.G2113A:p.A705T,ENSG00000198961:ENST00000361189:exon10:c.G2113A:p.A705T	NA	NA	5q21.3	NA	NA	NA	NA	rs246105	0.31	0.31	0.283	0.298922	0.2475	0.5565	0.2781	0.1172	0.3466	0.25	0.59	0.27	0.13	0.2756	0.59	0.1	T	0.0	B	0.0	B	0.387	N	1.000	P	0	N	2.8	T	-0.998	T	0.000	T	0.016	1.913	12.36	0.451	0.125	0.041	3.747	1.913297	1.913297	0.14	0.234419	0.161898	NA	0.217	NA	6.5758144
994	6	139206937	139206937	A	G	exonic	ECT2L	NA	synonymous SNV	ECT2L:NM_001195037:exon17:c.A2229G:p.Q743Q,ECT2L:NM_001077706:exon18:c.A2229G:p.Q743Q	exonic	ENSG00000203734	NA	synonymous SNV	ENSG00000203734:ENST00000367682:exon16:c.A2229G:p.Q743Q,ENSG00000203734:ENST00000423192:exon17:c.A2229G:p.Q743Q	Score=243;Name=lod=13	NA	6q24.1	NA	NA	NA	NA	rs17067993	0.12	0.12	0.128	0.127796	0.0209	0.2183	0.0346	0.2474	0.0491	0.02	0.23	0.04	0.22	0.0513	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.891728	NA	NA	0.01937	0.180754	NA	0.116	NA	6.5750966
995	2	206874339	206874339	G	A	exonic	INO80D	NA	synonymous SNV	INO80D:NM_017759:exon9:c.C1722T:p.P574P	exonic	ENSG00000114933	NA	synonymous SNV	ENSG00000114933:ENST00000403263:exon9:c.C1722T:p.P574P	Score=605;Name=lod=383	NA	2q33.3	Score=821;Name=V$GFI1_01	NA	NA	NA	rs817991	0.38	0.38	0.373	0.38758	0.3499	0.502	0.3228	0.2035	0.6033	0.36	0.54	0.33	0.24	0.3868	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.2137	NA	NA	0.356475	0.199848	NA	0.399	NA	6.5734916
995	6	130761867	130761867	T	C	exonic	TMEM200A	NA	synonymous SNV	TMEM200A:NM_001258276:exon2:c.T300C:p.N100N,TMEM200A:NM_001258278:exon2:c.T300C:p.N100N,TMEM200A:NM_052913:exon2:c.T300C:p.N100N,TMEM200A:NM_001258277:exon3:c.T300C:p.N100N	exonic	ENSG00000164484	NA	synonymous SNV	ENSG00000164484:ENST00000392429:exon2:c.T300C:p.N100N,ENSG00000164484:ENST00000545622:exon2:c.T300C:p.N100N,ENSG00000164484:ENST00000296978:exon3:c.T300C:p.N100N	Score=346;Name=lod=34	NA	6q23.1	NA	NA	NA	NA	rs12207253	0.02	0.02	0.019	0.0131789	0.0298	NA	0.0159	0.0189	NA	0.03	NA	0.02	0.01	0.0274	0.037	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.544529	NA	NA	0.037442	0.026101	NA	NA	NA	6.5720246
995	11	71548544	71548544	A	G	exonic	DEFB108B	NA	nonsynonymous SNV	DEFB108B:NM_001002035:exon2:c.A158G:p.Q53R	exonic	ENSG00000184276	NA	nonsynonymous SNV	ENSG00000184276:ENST00000328698:exon2:c.A158G:p.Q53R	NA	NA	11q13.4	NA	NA	NA	NA	rs7120658	0.47	0.47	0.454	0.536741	0.5984	0.3631	0.3934	0.6589	0.589	0.56	0.33	0.41	0.56	0.5603	0.64	1	T	0.0	B	0.0	B	0.965	N	1.000	P	.	.	2.88	T	-0.952	T	0.000	T	0.036	-0.681	1.034	-0.755	-0.735	-0.990	5.205	-0.680836	NA	1	0.60289	0.635682	ID=COSM232151;OCCURENCE=1(skin)	0.138	NA	6.5717434
995	2	240055966	240055966	C	T	exonic	HDAC4	NA	synonymous SNV	HDAC4:NM_006037:exon11:c.G1269A:p.P423P	exonic	ENSG00000068024	NA	synonymous SNV	ENSG00000068024:ENST00000543185:exon5:c.G21A:p.P7P,ENSG00000068024:ENST00000541256:exon9:c.G1176A:p.P392P,ENSG00000068024:ENST00000345617:exon11:c.G1269A:p.P423P	Score=509;Name=lod=156	NA	2q37.3	NA	NA	NA	NA	rs35291459	0.08	0.08	0.098	0.091254	0.0258	0.0149	0.0447	0.2821	0.0123	0.02	0.02	0.04	0.27	0.0419	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.707324	NA	NA	0.027674	0.221289	NA	0.094	NA	6.5712926
995	8	99208190	99208190	A	C	exonic	NIPAL2	NA	synonymous SNV	NIPAL2:NM_024759:exon9:c.T924G:p.T308T	exonic	ENSG00000104361	NA	synonymous SNV	ENSG00000104361:ENST00000341166:exon9:c.T924G:p.T308T,ENSG00000104361:ENST00000430223:exon9:c.T924G:p.T308T	Score=564;Name=lod=261	NA	8q22.2	Score=894;Name=V$FREAC7_01	NA	NA	NA	rs3779721	0.38	0.38	0.371	0.407348	0.3479	0.4325	0.4841	0.3026	0.5297	0.35	0.45	0.44	0.31	0.3896	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.914388	NA	NA	0.358223	0.305719	NA	0.362	NA	6.5709436
995	6	24653283	24653283	T	C	exonic	TDP2	NA	synonymous SNV	TDP2:NM_016614:exon6:c.A735G:p.L245L	exonic	ENSG00000111802	NA	synonymous SNV	ENSG00000111802:ENST00000341060:exon5:c.A561G:p.L187L,ENSG00000111802:ENST00000378198:exon6:c.A735G:p.L245L,ENSG00000111802:ENST00000545995:exon6:c.A825G:p.L275L	NA	NA	6p22.3	NA	NA	Name=6	NA	rs11559067	0.02	0.02	0.014	0.0119808	0.0318	0.001	0.0202	0.003	0.0092	0.03	0.0017	0.03	0.0041	0.0267	0.037	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.479703	NA	NA	0.037442	0.008852	NA	0.014	NA	6.5707246
995	5	95733112	95733112	A	G	exonic	PCSK1	NA	synonymous SNV	PCSK1:NM_001177876:exon6:c.T720C:p.N240N,PCSK1:NM_000439:exon12:c.T1650C:p.N550N,PCSK1:NM_001177875:exon12:c.T1509C:p.N503N	exonic	ENSG00000175426	NA	synonymous SNV	ENSG00000175426:ENST00000311106:exon12:c.T1650C:p.N550N,ENSG00000175426:ENST00000508626:exon12:c.T1509C:p.N503N	Score=640;Name=lod=530	NA	5q15	Score=824;Name=V$PPARG_03	NA	NA	NA	rs6233	0.34	0.34	0.341	0.342851	0.3678	0.2401	0.4078	0.4092	0.2873	0.35	0.26	0.44	0.36	0.3528	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.24893	1.24893	NA	0.375581	0.413527	NA	0.442	NA	6.5704856
995	6	29974500	29974500	A	G	ncRNA_intronic	HLA-J,ZNRD1-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000237669	NA	NA	NA	NA	NA	6p22.1	NA	Name=TAF1,Pol2,SUZ12,HEY1	Name=9	NA	rs9261105	0.18	0.18	0.197	0.191294	0.0964	0.1895	0.1744	0.2988	0.1575	0.09	0.2	0.2	0.3	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.374867	NA	NA	NA	NA	NA	0.167	NA	6.5702666
995	12	52886478	52886478	T	C	exonic	KRT6A	NA	synonymous SNV	KRT6A:NM_005554:exon1:c.A495G:p.E165E	exonic	ENSG00000205420	NA	synonymous SNV	ENSG00000205420:ENST00000330722:exon1:c.A495G:p.E165E	Score=610;Name=lod=403	NA	12q13.13	Score=776;Name=V$PAX5_01	NA	NA	NA	rs376545	0.39	0.39	0.42	0.361022	0.3748	0.5397	0.3458	0.3238	0.2239	0.32	0.57	0.33	0.35	0.3564	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.12144	NA	NA	0.365783	0.307081	NA	0.471	NA	6.5696836
995	16	69493016	69493016	A	G	exonic	CYB5B	NA	synonymous SNV	CYB5B:NM_030579:exon4:c.A354G:p.T118T	exonic	ENSG00000103018	NA	synonymous SNV	ENSG00000103018:ENST00000568237:exon2:c.A96G:p.T32T,ENSG00000103018:ENST00000307892:exon4:c.A354G:p.T118T,ENSG00000103018:ENST00000512062:exon4:c.A342G:p.T114T,ENSG00000103018:ENST00000561792:exon4:c.A342G:p.T114T	NA	NA	16q22.1	Score=754;Name=V$PPARA_01	NA	NA	NA	rs35730706	0.03	0.03	0.025	0.023762	0.0338	0.0506	0.0173	0.0015	0.0204	0.04	0.06	0.02	0.002	0.032	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.468692	1.468692	NA	0.031189	0.006118	NA	0.007	NA	6.5696776
995	11	131781634	131781634	G	A	intronic	NTM	NA	NA	NA	intronic	ENSG00000182667	NA	NA	NA	NA	NA	11q25	Score=680;Name=V$P53_01	Name=CTCF	Name=13	NA	rs11222836	0.42	0.42	0.39	0.361821	0.4304	0.6766	0.4092	0.0915	0.2986	0.43	0.67	0.4	0.13	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.96694	NA	NA	NA	NA	NA	0.239	NA	6.5696
995	5	34811137	34811137	T	G	exonic	RAI14	NA	synonymous SNV	RAI14:NM_001145523:exon7:c.T447G:p.L149L,RAI14:NM_001145520:exon8:c.T471G:p.L157L,RAI14:NM_001145522:exon8:c.T471G:p.L157L,RAI14:NM_015577:exon8:c.T471G:p.L157L,RAI14:NM_001145521:exon9:c.T471G:p.L157L,RAI14:NM_001145525:exon10:c.T480G:p.L160L	exonic	ENSG00000039560	NA	synonymous SNV	ENSG00000039560:ENST00000397449:exon7:c.T450G:p.L150L,ENSG00000039560:ENST00000506376:exon7:c.T447G:p.L149L,ENSG00000039560:ENST00000265109:exon8:c.T471G:p.L157L,ENSG00000039560:ENST00000428746:exon8:c.T471G:p.L157L,ENSG00000039560:ENST00000512629:exon8:c.T471G:p.L157L,ENSG00000039560:ENST00000503673:exon9:c.T471G:p.L157L,ENSG00000039560:ENST00000515799:exon10:c.T480G:p.L160L	Score=617;Name=lod=428	NA	5p13.2	NA	Name=STAT1	NA	NA	rs2271522	0.31	0.31	0.269	0.320088	0.3907	0.3591	0.4928	0.0741	0.4172	0.37	0.35	0.46	0.05	0.3503	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.307892	1.307892	NA	0.357791	0.124603	NA	0.341	NA	6.5678756
995	4	82126121	82126121	C	G	exonic	PRKG2	NA	synonymous SNV	PRKG2:NM_006259:exon1:c.G81C:p.R27R	exonic	ENSG00000138669	NA	synonymous SNV	ENSG00000138669:ENST00000264399:exon1:c.G81C:p.R27R,ENSG00000138669:ENST00000395578:exon2:c.G81C:p.R27R,ENSG00000138669:ENST00000418486:exon2:c.G81C:p.R27R	Score=393;Name=lod=53	NA	4q21.21	NA	NA	NA	NA	rs17484474	0.02	0.02	0.015	0.014976	0.0388	NA	0.0317	0.003	0.0102	0.04	NA	0.04	0.002	0.0225	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.270253	NA	NA	0.037558	0.008852	NA	0.007	NA	6.5678086
995	17	33768199	33768199	G	A	exonic	SLFN13	NA	synonymous SNV	SLFN13:NM_144682:exon6:c.C2109T:p.D703D	exonic	ENSG00000154760	NA	synonymous SNV	ENSG00000154760:ENST00000533791:exon4:c.C2109T:p.D703D,ENSG00000154760:ENST00000360502:exon5:c.C1155T:p.D385D,ENSG00000154760:ENST00000285013:exon6:c.C2109T:p.D703D,ENSG00000154760:ENST00000542635:exon6:c.C2109T:p.D703D,ENSG00000154760:ENST00000526861:exon7:c.C2109T:p.D703D,ENSG00000154760:ENST00000534689:exon7:c.C1155T:p.D385D	Score=385;Name=lod=49	NA	17q12	Score=822;Name=V$MEF2_03	NA	NA	NA	rs1822403	0.4	0.4	0.421	0.370208	0.3688	0.3849	0.3314	0.5068	0.1994	0.35	0.42	0.37	0.49	0.3555	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.504671	NA	NA	0.374651	0.477531	ID=COSM148241;OCCURENCE=1(stomach)	0.391	NA	6.5677156
995	10	115489152	115489152	C	G	exonic	CASP7	NA	nonsynonymous SNV	CASP7:NM_001267058:exon6:c.C690G:p.D230E,CASP7:NM_001227:exon7:c.C765G:p.D255E,CASP7:NM_001267056:exon7:c.C765G:p.D255E,CASP7:NM_001267057:exon7:c.C1020G:p.D340E,CASP7:NM_033338:exon8:c.C864G:p.D288E,CASP7:NM_033339:exon8:c.C765G:p.D255E,CASP7:NM_033340:exon8:c.C731G:p.T244S	exonic	ENSG00000165806	NA	nonsynonymous SNV	ENSG00000165806:ENST00000452490:exon6:c.C690G:p.D230E,ENSG00000165806:ENST00000369318:exon7:c.C765G:p.D255E,ENSG00000165806:ENST00000345633:exon8:c.C765G:p.D255E,ENSG00000165806:ENST00000369315:exon8:c.C765G:p.D255E,ENSG00000165806:ENST00000369321:exon8:c.C864G:p.D288E,ENSG00000165806:ENST00000369331:exon8:c.C731G:p.T244S	NA	NA	10q25.3	NA	NA	NA	NA	rs2227310	0.27	0.27	0.262	0.2498	0.2535	0.4157	0.2579	0.1278	0.2342	0.24	0.43	0.28	0.13	0.2598	0.43	1	T	0.0	B	0.001	B	0.514	N	0.000	P	.	.	1.9	T	-0.917	T	0.000	T	0.03	-0.186	3.097	1.66	0.362	-0.776	6.114	-0.185662	NA	1	0.252558	0.144803	NA	0.21	NA	6.5674754
995	1	39801815	39801815	A	C	intronic	MACF1	NA	NA	NA	exonic	ENSG00000127603	NA	nonsynonymous SNV	ENSG00000127603:ENST00000289893:exon1:c.A4875C:p.K1625N,ENSG00000127603:ENST00000372915:exon36:c.A9570C:p.K3190N,ENSG00000127603:ENST00000564288:exon37:c.A9555C:p.K3185N,ENSG00000127603:ENST00000567887:exon37:c.A9666C:p.K3222N	NA	NA	1p34.3	NA	NA	NA	NA	rs41270807	0.15	0.15	0.135	0.118211	0.1948	0.1597	0.2046	0.0121	0.0787	0.19	0.16	0.21	0.02	0.1842	0.22	0.02	D	0.157	B	0.125	B	0.861	N	1.000	P	0.695	N	0.45	T	-1.077	T	0.000	T	0.105	-0.784	0.72	1.25	0.021	0.781	3.284	-0.784039	NA	NA	0.220489	0.040485	NA	0.109	NA	6.5671777
995	10	105765745	105765745	A	G	exonic	SLK	NA	synonymous SNV	SLK:NM_014720:exon11:c.A2556G:p.L852L	exonic	ENSG00000065613	NA	synonymous SNV	ENSG00000065613:ENST00000335753:exon11:c.A2556G:p.L852L,ENSG00000065613:ENST00000369755:exon11:c.A2556G:p.L852L	Score=655;Name=lod=612	NA	10q24.33	NA	NA	NA	NA	rs805662	0.02	0.02	0.008	0.0175719	0.0288	NA	0.062	0.0023	0.0133	0.03	NA	0.05	0.0041	0.0306	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.075061	NA	NA	0.040116	0.006809	NA	NA	NA	6.5671506
995	15	29033856	29033856	G	C	ncRNA_exonic	LOC100289656	NA	NA	NA	ncRNA_exonic	ENSG00000232431	NA	NA	NA	NA	NA	15q13.1	NA	NA	NA	NA	rs113849928	0.07	0.07	0.07	0.0964457	0.0308	0.0377	0.0403	0.2141	0.1053	0.03	0.04	0.04	0.18	0.0691	0.18	0	D	.	.	.	.	.	.	.	.	.	.	.	.	-1.050	T	0.000	T	.	-0.156	3.236	-0.505	-0.020	0.674	4.709	-0.156386	NA	NA	NA	NA	NA	0.036	NA	6.5667666
995	7	30673401	30673401	A	G	exonic	GARS	NA	synonymous SNV	GARS:NM_002047:exon17:c.A2145G:p.T715T	exonic	ENSG00000106105	NA	synonymous SNV	ENSG00000106105:ENST00000389266:exon17:c.A2145G:p.T715T	Score=503;Name=lod=147	NA	7p14.3	NA	NA	NA	NA	rs4593	0.08	0.08	0.087	0.0764776	0.0278	NA	0.0403	0.2474	NA	0.03	NA	0.04	0.27	0.0387	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.063055	NA	NA	0.03364	0.219175	NA	0.101	NA	6.5665266
995	7	94041937	94041937	A	C	exonic	COL1A2	NA	synonymous SNV	COL1A2:NM_000089:exon25:c.A1446C:p.P482P	exonic	ENSG00000164692	NA	synonymous SNV	ENSG00000164692:ENST00000297268:exon25:c.A1446C:p.P482P	Score=626;Name=lod=466	NA	7q21.3	Score=920;Name=V$LMO2COM_01	NA	NA	NA	rs412777	0.34	0.34	0.345	0.327276	0.3837	0.3085	0.2882	0.3396	0.2996	0.39	0.33	0.31	0.31	0.3459	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.04748	NA	NA	0.370698	0.342261	ID=COSM1452968;OCCURENCE=1(large_intestine)	0.239	NA	6.5663686
995	14	92588002	92588002	T	G	exonic	NDUFB1	NA	synonymous SNV	NDUFB1:NM_004545:exon1:c.A120C:p.V40V	exonic	ENSG00000183648	NA	synonymous SNV	ENSG00000183648:ENST00000329559:exon1:c.A120C:p.V40V	NA	NA	14q32.12	NA	Name=Oct-2,POU2F2,TAF1,BRCA1_(C-1863),TAF7_(SQ-8),Pol2(phosphoS2),Pol2,NRSF,SP1,PAX5-C20,NFKB,HEY1,ZBTB7A_(SC-34508),FOXA1_(C-20),Pol2-4H8,E2F1,HA-E2F1	Name=147	NA	rs3818263	0.54	0.54	0.537	0.539736	0.334	0.8552	0.379	0.5514	0.5245	0.34	0.87	0.35	0.6	0.4273	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.002712	NA	NA	0.339111	0.506582	ID=COSM1563049;OCCURENCE=1(large_intestine)	0.486	NA	6.5662556
995	22	44594584	44594584	C	G	exonic	PARVG	NA	synonymous SNV	PARVG:NM_001137605:exon12:c.C795G:p.P265P,PARVG:NM_022141:exon12:c.C795G:p.P265P	exonic	ENSG00000138964	NA	synonymous SNV	ENSG00000138964:ENST00000415224:exon12:c.C795G:p.P265P,ENSG00000138964:ENST00000422871:exon12:c.C795G:p.P265P,ENSG00000138964:ENST00000444313:exon12:c.C795G:p.P265P	Score=514;Name=lod=163	NA	22q13.31	Score=843;Name=V$P300_01	NA	NA	NA	rs139152	0.24	0.24	0.219	0.204073	0.3966	0.1954	0.2046	0.0545	0.2168	0.39	0.19	0.24	0.08	0.3107	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.789009	NA	NA	0.393256	0.103268	NA	0.217	NA	6.5661106
995	15	75091247	75091247	C	T	exonic	CSK	NA	synonymous SNV	CSK:NM_004383:exon4:c.C210T:p.G70G,CSK:NM_001127190:exon5:c.C210T:p.G70G	exonic	ENSG00000103653	NA	synonymous SNV	ENSG00000103653:ENST00000220003:exon4:c.C210T:p.G70G,ENSG00000103653:ENST00000309470:exon4:c.C210T:p.G70G,ENSG00000103653:ENST00000569462:exon4:c.C210T:p.G70G,ENSG00000103653:ENST00000439220:exon5:c.C210T:p.G70G,ENSG00000103653:ENST00000567571:exon6:c.C210T:p.G70G	Score=527;Name=lod=185	NA	15q24.1	NA	NA	NA	NA	rs11553760	0.08	0.08	0.065	0.0892572	0.0249	0.2808	0.0245	0.028	0.0869	0.03	0.22	0.03	0.03	0.0541	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.031763	NA	NA	0.021997	0.034137	NA	0.058	NA	6.5656696
995	8	105263979	105263979	C	T	exonic	RIMS2	NA	synonymous SNV	RIMS2:NM_014677:exon22:c.C3423T:p.A1141A,RIMS2:NM_001100117:exon24:c.C3981T:p.A1327A	exonic	ENSG00000176406	NA	synonymous SNV	ENSG00000176406:ENST00000339750:exon6:c.C789T:p.A263A,ENSG00000176406:ENST00000262231:exon21:c.C3498T:p.A1166A,ENSG00000176406:ENST00000507740:exon22:c.C3423T:p.A1141A,ENSG00000176406:ENST00000406091:exon24:c.C3981T:p.A1327A,ENSG00000176406:ENST00000436393:exon28:c.C4035T:p.A1345A	Score=641;Name=lod=539	NA	8q22.3	Score=805;Name=V$ARP1_01	NA	NA	NA	rs10461	0.5	0.5	0.477	0.478035	0.3529	0.6498	0.536	0.5227	0.3282	0.36	0.62	0.51	0.56	0.3996	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.009341	NA	NA	0.349133	0.497591	NA	0.493	NA	6.5650336
996	1	51912760	51912760	T	G	exonic	EPS15	NA	synonymous SNV	EPS15:NM_001981:exon10:c.A669C:p.A223A	exonic	ENSG00000085832	NA	synonymous SNV	ENSG00000085832:ENST00000371730:exon10:c.A669C:p.A223A,ENSG00000085832:ENST00000371733:exon10:c.A669C:p.A223A	Score=637;Name=lod=516	NA	1p32.3	NA	NA	NA	NA	rs34704431	0.04	0.04	0.043	0.0469249	0.0328	0.0109	0.0274	0.0983	0.0429	0.03	0.02	0.03	0.09	0.0376	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.790133	NA	NA	0.031744	0.07921	NA	0.043	NA	6.5645226
996	7	110763563	110763563	T	C	exonic	LRRN3	NA	synonymous SNV	LRRN3:NM_018334:exon2:c.T735C:p.D245D,LRRN3:NM_001099658:exon3:c.T735C:p.D245D,LRRN3:NM_001099660:exon4:c.T735C:p.D245D	exonic	ENSG00000173114	NA	synonymous SNV	ENSG00000173114:ENST00000422987:exon2:c.T735C:p.D245D,ENSG00000173114:ENST00000308478:exon3:c.T735C:p.D245D,ENSG00000173114:ENST00000421101:exon4:c.T735C:p.D245D,ENSG00000173114:ENST00000451085:exon4:c.T735C:p.D245D	Score=515;Name=lod=165	NA	7q31.1	NA	NA	NA	NA	rs214865	0.09	0.09	0.116	0.0942492	0.0298	0.002	0.0418	0.3011	0.0133	0.03	NA	0.04	0.34	0.0449	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.582422	NA	NA	0.027455	0.273037	NA	0.13	NA	6.5645116
996	13	30784566	30784566	A	G	exonic	KATNAL1	NA	synonymous SNV	KATNAL1:NM_001014380:exon10:c.T1161C:p.A387A,KATNAL1:NM_032116:exon10:c.T1161C:p.A387A	exonic	ENSG00000102781	NA	synonymous SNV	ENSG00000102781:ENST00000380615:exon10:c.T1161C:p.A387A,ENSG00000102781:ENST00000380617:exon10:c.T1161C:p.A387A	Score=535;Name=lod=200	NA	13q12.3	NA	NA	NA	NA	rs11617724	0.05	0.05	0.048	0.0447284	0.0328	NA	0.036	0.1233	0.0031	0.03	NA	0.04	0.12	0.0332	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.359146	1.359146	NA	0.037093	0.109623	NA	0.036	NA	6.5635736
996	9	116356373	116356373	G	C	exonic	RGS3	NA	synonymous SNV	RGS3:NM_144489:exon1:c.G174C:p.L58L	exonic	ENSG00000138835	NA	synonymous SNV	ENSG00000138835:ENST00000462403:exon1:c.G174C:p.L58L	Score=471;Name=lod=109	NA	9q32	NA	Name=ELF1_(SC-631),Rad21,USF1_(SC-8983),TAF7_(SQ-8),Pol2,SP1,NRSF,TAF1,TBP,USF-1,HEY1,c-Myc,Pol2-4H8,JunD,FOSL2,Pol2(b)	Name=140	NA	rs12350531	0.76	0.76	0.736	0.742212	0.6978	0.879	0.7637	0.6853	0.7086	0.7	0.89	0.74	0.72	0.7242	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.92612	NA	NA	0.682061	0.68574	ID=COSM455194;OCCURENCE=1(breast)	0.717	NA	6.5626056
996	8	52232487	52232487	G	T	exonic	PXDNL	NA	nonsynonymous SNV	PXDNL:NM_144651:exon23:c.C4356A:p.D1452E	exonic	ENSG00000147485	NA	nonsynonymous SNV	ENSG00000147485:ENST00000356297:exon23:c.C4356A:p.D1452E	NA	NA	8q11.22	NA	NA	NA	NA	rs1052704	0.3	0.3	0.309	0.3125	0.2396	0.1111	0.2118	0.6377	0.227	0.24	0.12	0.24	0.63	0.2695	0.63	0.82	T	0.008	B	0.004	B	.	.	1.000	P	0.125	N	-0.12	T	-0.962	T	0.000	T	0.103	0.039	4.215	-0.13	-0.131	-0.186	3.755	0.038775	NA	0.45	0.261824	0.553411	NA	0.319	NA	6.5624094
996	9	77436641	77436641	G	A	exonic	TRPM6	NA	synonymous SNV	TRPM6:NM_001177310:exon8:c.C939T:p.G313G,TRPM6:NM_001177311:exon8:c.C939T:p.G313G,TRPM6:NM_017662:exon8:c.C954T:p.G318G	exonic	ENSG00000119121	NA	synonymous SNV	ENSG00000119121:ENST00000360774:exon8:c.C954T:p.G318G,ENSG00000119121:ENST00000361255:exon8:c.C939T:p.G313G,ENSG00000119121:ENST00000376864:exon8:c.C954T:p.G318G,ENSG00000119121:ENST00000376871:exon8:c.C954T:p.G318G,ENSG00000119121:ENST00000376872:exon8:c.C954T:p.G318G,ENSG00000119121:ENST00000449912:exon8:c.C939T:p.G313G,ENSG00000119121:ENST00000451710:exon8:c.C954T:p.G318G	Score=482;Name=lod=121	NA	9q21.13	Score=800;Name=V$PAX4_01	NA	NA	NA	rs7018994	0.36	0.36	0.329	0.358826	0.3787	0.5536	0.4438	0.0673	0.4714	0.35	0.54	0.46	0.09	0.3722	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.559684	NA	NA	0.353837	0.116205	NA	0.304	NA	6.5619296
996	7	5417609	5417609	G	A	exonic	TNRC18	NA	synonymous SNV	TNRC18:NM_001080495:exon6:c.C2199T:p.H733H	exonic	ENSG00000182095	NA	synonymous SNV	ENSG00000182095:ENST00000413081:exon2:c.C405T:p.H135H,ENSG00000182095:ENST00000399537:exon6:c.C2199T:p.H733H,ENSG00000182095:ENST00000430969:exon6:c.C2199T:p.H733H	Score=426;Name=lod=72	NA	7p22.1	NA	NA	NA	NA	rs116929984	0.02	0.02	0.009	0.0197684	0.0288	NA	0.0893	0.0008	0.0072	0.03	NA	0.06	0.0041	0.037	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.179841	NA	NA	0.039871	0.008138	NA	0.014	NA	6.5609956
996	17	8079029	8079029	G	C	intronic	TMEM107	NA	NA	NA	exonic	ENSG00000179029	NA	stopgain	ENSG00000179029:ENST00000532998:exon3:c.C302G:p.S101X	NA	NA	17p13.1	NA	NA	Name=3	NA	rs8064449	0.58	0.58	0.538	0.588059	0.6561	0.496	0.6744	0.4607	0.7239	0.66	0.54	0.65	0.45	0.6426	0.66	0	D	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.956	T	0.000	T	.	3.875	19.69	1.23	0.624	0.111	4.563	3.874844	3.874844	0	0.640698	0.489787	NA	0.572	NA	6.560602
996	5	72144209	72144209	C	T	intronic	TNPO1	NA	NA	NA	intronic	ENSG00000083312	NA	NA	NA	Score=684;Name=lod=800	NA	5q13.2	NA	Name=Pol2(b),GABP,YY1,Pol2,Pol2-4H8,HA-E2F1,YY1_(C-20),c-Myc	Name=148	NA	rs34652	0.2	0.2	0.166	0.169329	0.163	0.3909	0.1037	0.1293	0.0481	0.16	0.38	0.11	0.13	0.1444	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.109997	2.109997	NA	0.132558	0.137313	NA	0.101	NA	6.560042
996	20	44417643	44417643	A	G	exonic	WFDC3	NA	synonymous SNV	WFDC3:NM_080614:exon3:c.T138C:p.G46G	exonic	ENSG00000124116	NA	synonymous SNV	ENSG00000124116:ENST00000372632:exon2:c.T138C:p.G46G,ENSG00000124116:ENST00000243938:exon3:c.T138C:p.G46G	NA	NA	20q13.12	NA	NA	NA	NA	rs6032537	0.68	0.68	0.667	0.654553	0.7058	0.6458	0.7896	0.6384	0.5368	0.73	0.62	0.76	0.6	0.6888	0.76	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-1.001	T	0.000	T	.	-1.3	0.037	-2.56	-0.831	-1.249	8.035	-1.29988	NA	NA	0.713721	0.664775	ID=COSM1178472;OCCURENCE=1(prostate)	0.761	NA	6.5583456
996	3	10089738	10089738	A	G	intronic	FANCD2	NA	NA	NA	intronic	ENSG00000144554	NA	NA	NA	Score=483;Name=lod=122	NA	3p25.3	NA	Name=ERalpha_a,FOXA1_(C-20),p300	Name=9	NA	rs62245508	NA	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4417	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.474309	2.474309	NA	NA	NA	NA	NA	NA	6.5583
996	9	94487066	94487066	C	T	exonic	ROR2	NA	synonymous SNV	ROR2:NM_004560:exon9:c.G1710A:p.P570P	exonic	ENSG00000169071	NA	synonymous SNV	ENSG00000169071:ENST00000375708:exon9:c.G1710A:p.P570P,ENSG00000169071:ENST00000375715:exon9:c.G1290A:p.P430P	NA	NA	9q22.31	Score=836;Name=V$PAX4_01	NA	NA	NA	rs41277837	0.02	0.02	0.019	0.013778	0.0388	NA	0.0202	0.0023	0.0133	0.04	NA	0.03	0.0041	0.0288	0.041	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.381559	NA	NA	0.041047	0.01044	NA	0.022	NA	6.5580196
996	11	102643718	102643718	G	T	exonic	MMP10	NA	synonymous SNV	MMP10:NM_002425:exon8:c.C1086A:p.I362I	exonic	ENSG00000166670	NA	synonymous SNV	ENSG00000166670:ENST00000279441:exon8:c.C1086A:p.I362I	Score=329;Name=lod=29	NA	11q22.2	NA	NA	NA	NA	rs17359286	0.02	0.02	0.023	0.0111821	0.0408	NA	0.0159	0.0015	0.002	0.04	NA	0.01	0.0041	0.0293	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.573588	NA	NA	0.038623	0.006355	NA	0.014	NA	6.5579436
996	20	3686512	3686512	G	A	exonic	SIGLEC1	NA	synonymous SNV	SIGLEC1:NM_023068:exon3:c.C585T:p.G195G	exonic	ENSG00000088827	NA	synonymous SNV	ENSG00000088827:ENST00000202578:exon3:c.C585T:p.G195G,ENSG00000088827:ENST00000344754:exon3:c.C585T:p.G195G	NA	NA	20p13	Score=899;Name=V$AP2_Q6	NA	NA	NA	rs6052021	0.11	0.11	0.14	0.114217	0.0278	NA	0.0447	0.3654	0.0307	0.03	NA	0.04	0.42	0.0521	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.145819	NA	NA	0.029186	0.322742	NA	0.167	NA	6.5575806
996	12	62749124	62749124	A	T	exonic	USP15	NA	synonymous SNV	USP15:NM_006313:exon7:c.A696T:p.S232S,USP15:NM_001252078:exon8:c.A783T:p.S261S	exonic	ENSG00000135655	NA	synonymous SNV	ENSG00000135655:ENST00000353364:exon7:c.A696T:p.S232S,ENSG00000135655:ENST00000393654:exon7:c.A708T:p.S236S,ENSG00000135655:ENST00000280377:exon8:c.A783T:p.S261S	Score=708;Name=lod=1004	NA	12q14.1	NA	NA	NA	NA	rs34633189	0.03	0.03	0.024	0.0289537	0.0368	0.001	0.0303	0.0522	0.0174	0.03	NA	0.03	0.05	0.0351	0.056	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.239235	1.239235	NA	0.037227	0.05606	NA	0.029	NA	6.5575396
996	8	2040181	2040181	T	G	exonic	MYOM2	NA	synonymous SNV	MYOM2:NM_003970:exon16:c.T1836G:p.P612P	exonic	ENSG00000036448	NA	synonymous SNV	ENSG00000036448:ENST00000523438:exon3:c.T111G:p.P37P,ENSG00000036448:ENST00000262113:exon16:c.T1836G:p.P612P	Score=366;Name=lod=41	NA	8p23.3	NA	NA	NA	NA	rs17064685	0.06	0.06	0.058	0.071885	0.0427	0.001	0.0562	0.2042	0.0072	0.04	NA	0.07	0.17	0.0386	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.365728	NA	NA	0.028837	0.186564	NA	0.065	NA	6.5565296
996	20	62598815	62598815	C	T	exonic	ZNF512B	NA	synonymous SNV	ZNF512B:NM_020713:exon3:c.G183A:p.P61P	exonic	ENSG00000196700	NA	synonymous SNV	ENSG00000196700:ENST00000217130:exon3:c.G183A:p.P61P,ENSG00000196700:ENST00000369888:exon3:c.G183A:p.P61P,ENSG00000196700:ENST00000450537:exon3:c.G183A:p.P61P	Score=391;Name=lod=52	NA	20q13.33	Score=734;Name=V$PPARG_01	NA	NA	NA	rs817330	0.28	0.28	0.272	0.319089	0.3767	0.0516	0.2507	0.4402	0.4202	0.37	0.05	0.25	0.42	0.3614	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.660907	NA	NA	0.372093	0.447118	ID=COSM1413222;OCCURENCE=1(large_intestine)	0.377	NA	6.5564736
996	7	5036645	5036645	T	C	ncRNA_exonic	RNF216P1	NA	NA	NA	ncRNA_exonic	ENSG00000196204	NA	NA	NA	Score=551;Name=lod=231	NA	7p22.1	NA	Name=CTCF_(SC-5916),CTCF	NA	NA	rs9639893	0.15	0.15	0.129	0.139976	0.1103	0.254	0.1715	0.0598	0.1391	0.1	0.27	0.18	0.06	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.144928	NA	NA	NA	NA	NA	0.087	NA	6.5563666
996	7	5036720	5036720	C	T	ncRNA_exonic	RNF216P1	NA	NA	NA	ncRNA_exonic	ENSG00000196204	NA	NA	NA	Score=470;Name=lod=108	NA	7p22.1	NA	Name=CTCF,CTCF_(SC-5916)	NA	NA	rs9639894	0.14	0.14	0.126	0.135184	0.1103	0.2351	0.1671	0.0582	0.1391	0.1	0.24	0.17	0.06	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.07313	NA	NA	NA	NA	NA	0.101	NA	6.5563666
996	11	123901175	123901175	C	A	exonic	OR10G8	NA	synonymous SNV	OR10G8:NM_001004464:exon1:c.C846A:p.L282L	exonic	ENSG00000234560	NA	synonymous SNV	ENSG00000234560:ENST00000431524:exon1:c.C846A:p.L282L	Score=452;Name=lod=92	NA	11q24.2	NA	NA	NA	NA	rs11825515	0.06	0.06	0.056	0.0732827	0.0308	0.0734	0.0202	0.1286	0.0798	0.04	0.09	0.02	0.11	0.0493	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.571385	NA	NA	0.031054	0.121763	ID=COSM147364;OCCURENCE=1(stomach)	0.072	NA	6.5555126
997	15	44038899	44038899	C	T	exonic	PDIA3	NA	synonymous SNV	PDIA3:NM_005313:exon1:c.C162T:p.A54A	exonic	ENSG00000167004	NA	synonymous SNV	ENSG00000167004:ENST00000300289:exon1:c.C162T:p.A54A,ENSG00000167004:ENST00000434494:exon1:c.C162T:p.A54A,ENSG00000167004:ENST00000446523:exon1:c.C162T:p.A54A,ENSG00000167004:ENST00000455250:exon1:c.C90T:p.A30A	Score=493;Name=lod=135	NA	15q15.3	NA	Name=CTCF,E2F6_(H-50),GATA-1,Pol2,Egr-1	Name=24	NA	rs2411284	0.57	0.57	0.518	0.549121	0.7127	0.6944	0.7003	0.1755	0.6288	0.71	0.63	0.68	0.18	0.6743	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.761729	NA	NA	0.724729	0.324202	ID=COSM433931;OCCURENCE=1(breast)	0.37	NA	6.5549376
997	6	32427735	32427735	G	T	intergenic	HLA-DRA,HLA-DRB5	dist=14909;dist=57419	NA	NA	ncRNA_exonic	ENSG00000196301	NA	NA	NA	NA	NA	6p21.32	Score=785;Name=V$TAXCREB_01	Name=Pol2,HA-E2F1,c-Myc	Name=6	NA	rs28732234	0.12	0.12	0.095	0.121006	0.1789	0.0526	0.1138	0.0976	0.1687	0.18	0.05	0.12	0.11	0.1247	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.176318	NA	NA	0.141888	0.09532	NA	0.13	NA	6.554512
997	15	90188392	90188392	A	T	exonic	KIF7	NA	synonymous SNV	KIF7:NM_198525:exon10:c.T2043A:p.V681V	exonic	ENSG00000166813	NA	synonymous SNV	ENSG00000166813:ENST00000394412:exon10:c.T2043A:p.V681V	NA	NA	15q26.1	NA	NA	NA	NA	rs72750755	0.01	0.01	0.01	0.0179712	0.0338	NA	0.0187	NA	0.044	0.03	NA	0.02	NA	0.0363	0.042	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.577856	NA	NA	0.042335	0.0075	NA	0.036	CLINSIG=probable-non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000117416.2|RCV000126512.1;CLNDSDB=.|.;CLNDSDBID=.|.	6.5542316
997	11	4790605	4790605	A	G	exonic	OR51F1	NA	synonymous SNV	OR51F1:NM_001004752:exon1:c.T543C:p.C181C	exonic	ENSG00000188069	NA	synonymous SNV	ENSG00000188069:ENST00000343430:exon1:c.T543C:p.C181C,ENSG00000188069:ENST00000380383:exon1:c.T564C:p.C188C	Score=358;Name=lod=38	NA	11p15.4	NA	NA	NA	NA	rs112024216	0.03	0.03	0.018	0.0153754	0.0487	NA	0.0389	0.0008	NA	0.05	NA	0.06	NA	0.0255	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.045446	NA	NA	0.038506	0.008405	NA	0.08	NA	6.5539606
997	19	57955244	57955244	A	G	exonic	ZNF749	NA	nonsynonymous SNV	ZNF749:NM_001023561:exon3:c.A728G:p.Q243R	exonic	ENSG00000186230	NA	nonsynonymous SNV	ENSG00000186230:ENST00000334181:exon3:c.A728G:p.Q243R	NA	NA	19q13.43	NA	NA	NA	NA	rs12986235	0.21	0.21	0.2	0.199281	0.2883	0.0913	0.1931	0.2428	0.1646	0.28	0.07	0.25	0.22	0.224	0.28	0.18	T	0.053	B	0.012	B	.	.	1.000	P	1.705	L	2.36	T	-0.960	T	0.000	T	0.03	2.333	13.76	-0.122	-0.268	-0.861	2.791	2.333168	2.333168	0.11	0.267093	0.244666	NA	0.196	NA	6.5539404
997	11	118772160	118772160	G	A	exonic	BCL9L	NA	synonymous SNV	BCL9L:NM_182557:exon6:c.C2292T:p.P764P	exonic	ENSG00000186174	NA	synonymous SNV	ENSG00000186174:ENST00000334801:exon6:c.C2292T:p.P764P	Score=369;Name=lod=42	NA	11q23.3	NA	NA	NA	NA	rs61730467	0.03	0.03	0.026	0.0471246	0.0427	0.003	0.0418	0.0484	0.0992	0.04	NA	0.03	0.06	0.039	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.225112	NA	NA	0.031214	0.050682	NA	0.029	NA	6.5537526
997	9	130536484	130536484	C	T	exonic	SH2D3C	NA	synonymous SNV	SH2D3C:NM_170600:exon2:c.G300A:p.A100A	exonic	ENSG00000095370	NA	synonymous SNV	ENSG00000095370:ENST00000314830:exon2:c.G300A:p.A100A	NA	NA	9q34.11	NA	Name=CTCF	NA	NA	rs55932444	0.03	0.03	0.023	0.023762	0.0527	NA	0.036	0.0265	0.0061	0.05	NA	0.06	0.02	0.03	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.386526	NA	NA	0.030698	0.019292	NA	0.036	NA	6.5532686
997	6	29855978	29855978	G	T	ncRNA_exonic	HLA-H	NA	NA	NA	ncRNA_exonic	ENSG00000206341,ENSG00000230521	NA	NA	NA	NA	NA	6p22.1	NA	Name=NFKB,Pol2-4H8,Pol2	Name=64	NA	rs7768484	0.05	0.05	0.056	0.0615016	0.0497	0.0516	0.0317	0.059	0.1084	0.06	0.05	0.04	0.06	0.0639	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.605834	NA	NA	NA	NA	NA	0.007	NA	6.5530666
997	19	12157507	12157507	G	C	exonic	ZNF878	NA	synonymous SNV	ZNF878:NM_001080404:exon2:c.C72G:p.S24S	exonic	ENSG00000257355,ENSG00000257446	NA	synonymous SNV	ENSG00000257355:ENST00000547473:exon2:c.C72G:p.S24S,ENSG00000257446:ENST00000547628:exon2:c.C72G:p.S24S,ENSG00000257446:ENST00000602107:exon3:c.C213G:p.S71S	Score=355;Name=lod=37	NA	19p13.2	NA	NA	NA	NA	rs11668160	0.02	0.02	0.016	0.013778	0.0368	NA	0.0159	0.0015	0.0194	0.04	NA	0.01	0.0041	0.033	0.044	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.377097	1.377097	NA	0.044186	0.01044	NA	0.007	NA	6.5526806
997	7	5036611	5036611	C	G	ncRNA_exonic	RNF216P1	NA	NA	NA	ncRNA_exonic	ENSG00000196204	NA	NA	NA	Score=551;Name=lod=231	NA	7p22.1	NA	Name=CTCF,CTCF_(SC-5916)	NA	NA	rs9639891	0.15	0.15	0.138	0.140575	0.1143	0.253	0.17	0.0605	0.1391	0.11	0.27	0.18	0.06	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.079541	NA	NA	NA	NA	ID=COSN167952;OCCURENCE=1(large_intestine)	0.08	NA	6.5523666
997	12	52200742	52200742	C	A	exonic	SCN8A	NA	synonymous SNV	SCN8A:NM_001177984:exon26:c.C5349A:p.P1783P,SCN8A:NM_014191:exon27:c.C5472A:p.P1824P	exonic	ENSG00000196876	NA	synonymous SNV	ENSG00000196876:ENST00000545061:exon25:c.C5349A:p.P1783P,ENSG00000196876:ENST00000354534:exon27:c.C5472A:p.P1824P	Score=583;Name=lod=311	NA	12q13.13	Score=841;Name=V$MRF2_01	NA	NA	NA	rs60637	0.57	0.57	0.507	0.489018	0.7276	0.5665	0.7464	0.2526	0.3006	0.72	0.52	0.71	0.29	0.6416	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.374588	NA	NA	0.745593	0.327757	NA	0.457	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118287.2;CLNDSDB=.;CLNDSDBID=.	6.5518736
997	11	43913604	43913604	G	A	exonic	ALKBH3	NA	synonymous SNV	ALKBH3:NM_139178:exon7:c.G384A:p.Q128Q	exonic	ENSG00000166199	NA	synonymous SNV	ENSG00000166199:ENST00000529366:exon6:c.G381A:p.Q127Q,ENSG00000166199:ENST00000302708:exon7:c.G384A:p.Q128Q	Score=628;Name=lod=474	NA	11p11.2	NA	NA	NA	NA	rs16937692	0.06	0.06	0.035	0.0605032	0.0268	0.0248	0.2046	0.0393	0.0583	0.02	0.03	0.19	0.04	0.0573	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.918985	NA	NA	0.030698	0.03291	NA	0.065	NA	6.5518686
997	8	19809435	19809435	G	A	exonic	LPL	NA	synonymous SNV	LPL:NM_000237:exon3:c.G405A:p.V135V	exonic	ENSG00000175445	NA	synonymous SNV	ENSG00000175445:ENST00000311322:exon3:c.G405A:p.V135V,ENSG00000175445:ENST00000520959:exon3:c.G177A:p.V59V	Score=355;Name=lod=37	NA	8p21.3	NA	NA	NA	NA	rs1121923	0.05	0.05	0.064	0.0491214	0.0398	NA	0.0274	0.1392	0.0031	0.04	NA	0.03	0.15	0.0346	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.606319	NA	NA	0.04093	0.113936	NA	0.087	NA	6.5513366
997	2	239049602	239049602	C	T	exonic	KLHL30	NA	synonymous SNV	KLHL30:NM_198582:exon2:c.C207T:p.S69S	exonic	ENSG00000168427	NA	synonymous SNV	ENSG00000168427:ENST00000305959:exon2:c.C153T:p.S51S,ENSG00000168427:ENST00000409223:exon2:c.C207T:p.S69S	Score=419;Name=lod=67	NA	2q37.3	NA	NA	NA	NA	rs147827992	0.02	0.02	0.012	0.0129792	0.0467	NA	0.0231	NA	0.002	0.04	NA	0.03	NA	0.0304	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.082441	NA	NA	0.038516	0.007642	ID=COSM442576,COSM442577;OCCURENCE=1(breast)	0.051	NA	6.5510506
997	19	35510102	35510102	G	C	exonic	GRAMD1A	NA	synonymous SNV	GRAMD1A:NM_001136199:exon11:c.G1200C:p.T400T,GRAMD1A:NM_020895:exon12:c.G1221C:p.T407T	exonic	ENSG00000089351	NA	synonymous SNV	ENSG00000089351:ENST00000411896:exon11:c.G1200C:p.T400T,ENSG00000089351:ENST00000504615:exon11:c.G519C:p.T173T,ENSG00000089351:ENST00000317991:exon12:c.G1221C:p.T407T,ENSG00000089351:ENST00000599564:exon13:c.G1482C:p.T494T	Score=433;Name=lod=77	NA	19q13.12	NA	Name=Pol2	NA	NA	rs2290646	0.37	0.37	0.397	0.372804	0.3777	0.2212	0.3862	0.5484	0.2771	0.38	0.2	0.4	0.54	0.3674	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.041204	NA	NA	0.37057	0.513023	NA	0.391	NA	6.5509966
997	7	128415195	128415195	T	G	exonic	OPN1SW	NA	synonymous SNV	OPN1SW:NM_001708:exon2:c.A366C:p.G122G	exonic	ENSG00000128617	NA	synonymous SNV	ENSG00000128617:ENST00000249389:exon2:c.A366C:p.G122G	Score=539;Name=lod=207	NA	7q32.1	NA	Name=Pol2(b),Pol2-4H8	NA	NA	rs1799922	0.23	0.23	0.22	0.187101	0.4095	0.0675	0.2291	0.112	0.1534	0.41	0.06	0.26	0.13	0.3026	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.214075	NA	NA	0.403605	0.147753	ID=COSM150388;OCCURENCE=1(stomach)	0.239	NA	6.5509616
997	3	49726028	49726028	T	C	intronic	MST1	NA	NA	NA	intronic	ENSG00000173531	NA	NA	NA	Score=289;Name=lod=20	NA	3p21.31	NA	Name=CEBPB	Name=2	NA	rs62262685	NA	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4498	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.804257	NA	NA	NA	NA	NA	NA	NA	6.5502
997	11	33106616	33106616	C	T	UTR3	CSTF3	NM_001326:c.*17G>A	NA	NA	exonic	ENSG00000176148	NA	stopgain	ENSG00000176148:ENST00000324357:exon7:c.C1075T:p.Q359X,ENSG00000176148:ENST00000527661:exon12:c.C1738T:p.Q580X	NA	NA	11p13	NA	NA	NA	NA	rs3758741	0.27	0.27	0.269	0.229034	0.4026	0.2143	0.2464	0.1014	0.226	0.39	0.25	0.28	0.11	0.3165	0.4	0	D	.	.	.	.	.	.	0.961	P	.	.	.	.	.	.	.	.	.	3.798	19.28	-1.19	-0.092	0.437	4.749	3.797736	3.797736	0	0.398325	0.144414	NA	0.304	NA	6.5492417
997	6	29694570	29694570	A	G	ncRNA_exonic	HLA-F-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000214922,ENSG00000239257	NA	NA	NA	Score=737;Name=lod=1318	NA	6p22.1	NA	Name=Pol2-4H8	NA	NA	rs3734813	0.19	0.19	0.187	0.230831	0.1183	0.2917	0.1628	0.2632	0.2883	0.12	0.27	0.15	0.24	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.717631	NA	NA	NA	NA	NA	0.232	NA	6.5483666
997	15	52901914	52901914	T	C	exonic	FAM214A	NA	synonymous SNV	FAM214A:NM_019600:exon6:c.A1197G:p.Q399Q	exonic	ENSG00000047346	NA	synonymous SNV	ENSG00000047346:ENST00000399202:exon5:c.A933G:p.Q311Q,ENSG00000047346:ENST00000546305:exon5:c.A1218G:p.Q406Q,ENSG00000047346:ENST00000261844:exon6:c.A1197G:p.Q399Q,ENSG00000047346:ENST00000534964:exon6:c.A1197G:p.Q399Q	Score=265;Name=lod=16	NA	15q21.3	NA	NA	NA	NA	rs3751613	0.08	0.08	0.082	0.0766773	0.0328	0.2073	0.036	0.0492	0.0532	0.03	0.22	0.03	0.05	0.0533	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011808	NA	NA	0.032401	0.040961	NA	0.043	NA	6.5481656
997	20	5753579	5753579	C	T	exonic	C20orf196	NA	nonsynonymous SNV	C20orf196:NM_152504:exon2:c.C68T:p.A23V	exonic	ENSG00000171984	NA	nonsynonymous SNV	ENSG00000171984:ENST00000303142:exon2:c.C68T:p.A23V,ENSG00000171984:ENST00000378979:exon2:c.C68T:p.A23V,ENSG00000171984:ENST00000442185:exon3:c.C209T:p.A70V,ENSG00000171984:ENST00000445603:exon3:c.C68T:p.A23V	NA	NA	20p12.3	NA	NA	NA	NA	rs237422	0.25	0.25	0.231	0.234026	0.2604	0.1518	0.2507	0.2958	0.1963	0.26	0.16	0.29	0.32	0.2495	0.32	0.96	T	0.002	B	0.005	B	0.840	N	1.000	P	-0.205	N	1.24	T	-0.950	T	0.000	T	0.068	-2.095	0.006	1.73	-0.095	0.551	10.101	-2.095195	NA	0.69	0.275581	0.267817	ID=COSM149133;OCCURENCE=1(stomach)	0.341	NA	6.5478524
997	6	46976924	46976924	G	A	exonic	GPR110	NA	synonymous SNV	GPR110:NM_153840:exon11:c.C2247T:p.V749V	exonic	ENSG00000153292	NA	synonymous SNV	ENSG00000153292:ENST00000283297:exon5:c.C1656T:p.V552V,ENSG00000153292:ENST00000371253:exon11:c.C2247T:p.V749V	Score=321;Name=lod=27	NA	6p12.3	NA	NA	NA	NA	rs45511696	0.04	0.04	0.043	0.0371406	0.0447	NA	0.0389	0.0787	0.0102	0.04	NA	0.04	0.09	0.0364	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.253388	NA	NA	0.03814	0.085111	NA	0.058	NA	6.5474266
997	7	16816000	16816000	T	C	exonic	TSPAN13	NA	synonymous SNV	TSPAN13:NM_014399:exon2:c.T228C:p.F76F	exonic	ENSG00000106537	NA	synonymous SNV	ENSG00000106537:ENST00000262067:exon2:c.T228C:p.F76F	Score=478;Name=lod=117	NA	7p21.1	Score=836;Name=V$MEF2_04	NA	NA	NA	rs2290837	0.36	0.36	0.354	0.338259	0.3926	0.2024	0.3487	0.4766	0.228	0.4	0.21	0.36	0.49	0.3457	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.353574	1.353574	NA	0.381279	0.455969	NA	0.42	NA	6.5470876
997	13	28009920	28009920	G	C	exonic	MTIF3	NA	nonsynonymous SNV	MTIF3:NM_001166261:exon5:c.C729G:p.F243L,MTIF3:NM_001166262:exon5:c.C729G:p.F243L,MTIF3:NM_152912:exon5:c.C729G:p.F243L,MTIF3:NM_001166263:exon6:c.C729G:p.F243L	exonic	ENSG00000122033	NA	nonsynonymous SNV	ENSG00000122033:ENST00000381120:exon5:c.C729G:p.F243L,ENSG00000122033:ENST00000405591:exon5:c.C729G:p.F243L,ENSG00000122033:ENST00000431572:exon6:c.C729G:p.F243L,ENSG00000122033:ENST00000381116:exon7:c.C729G:p.F243L	Score=295;Name=lod=21	NA	13q12.2	NA	NA	NA	NA	rs1218825	0.8	0.8	0.833	0.816893	0.9483	0.5794	0.683	0.8903	0.9223	0.95	0.56	0.76	0.9	0.8806	0.96	1	T	0.0	B	0.0	B	0.012	N	1.000	P	-1.7	N	1.77	T	-0.961	T	0.000	T	0.032	-1.078	0.164	3.0	-0.114	0.457	10.075	-1.078298	NA	1	0.957907	0.908761	NA	0.79	NA	6.5465264
997	22	42905055	42905055	G	A	ncRNA_exonic	SERHL	NA	NA	NA	ncRNA_exonic	ENSG00000172250	NA	NA	NA	NA	NA	22q13.2	NA	Name=Pol2,Pol2-4H8	Name=4	NA	rs56365446	0.09	0.09	0.04	NA	NA	NA	NA	NA	NA	0.11	0.03	0.17	0.06	0.1206	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.354162	NA	NA	NA	NA	NA	0.072	NA	6.5460666
997	1	99753631	99753631	G	A	exonic	LPPR4	NA	synonymous SNV	LPPR4:NM_001166252:exon2:c.G333A:p.P111P,LPPR4:NM_014839:exon2:c.G333A:p.P111P	exonic	ENSG00000117600	NA	synonymous SNV	ENSG00000117600:ENST00000370185:exon2:c.G333A:p.P111P,ENSG00000117600:ENST00000457765:exon2:c.G333A:p.P111P	Score=616;Name=lod=424	NA	1p21.2	NA	NA	NA	NA	rs35121076	0.06	0.06	0.067	0.0750799	0.0348	0.128	0.0562	0.0477	0.1125	0.03	0.13	0.05	0.06	0.0538	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.439218	1.439218	NA	0.032209	0.049932	NA	0.051	NA	6.5458576
997	17	38173143	38173143	G	A	exonic	CSF3	NA	synonymous SNV	CSF3:NM_001178147:exon4:c.G438A:p.L146L,CSF3:NM_172220:exon4:c.G447A:p.L149L,CSF3:NM_000759:exon5:c.G555A:p.L185L,CSF3:NM_172219:exon5:c.G546A:p.L182L	exonic	ENSG00000108342	NA	synonymous SNV	ENSG00000108342:ENST00000577675:exon3:c.G426A:p.L142L,ENSG00000108342:ENST00000331769:exon4:c.G534A:p.L178L,ENSG00000108342:ENST00000394148:exon4:c.G447A:p.L149L,ENSG00000108342:ENST00000583218:exon4:c.G438A:p.L146L,ENSG00000108342:ENST00000225474:exon5:c.G555A:p.L185L,ENSG00000108342:ENST00000394149:exon5:c.G546A:p.L182L	Score=284;Name=lod=19	NA	17q21.1	Score=823;Name=V$GRE_C	NA	NA	NA	rs25645	0.32	0.32	0.3	0.313698	0.3668	0.4276	0.4135	0.0514	0.4254	0.36	0.41	0.41	0.07	0.3816	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.311292	NA	NA	0.372442	0.098048	NA	0.348	NA	6.5458246
998	11	4843164	4843164	C	T	exonic	OR51F2	NA	synonymous SNV	OR51F2:NM_001004753:exon1:c.C549T:p.C183C	exonic	ENSG00000176925	NA	synonymous SNV	ENSG00000176925:ENST00000322110:exon1:c.C549T:p.C183C	Score=325;Name=lod=28	NA	11p15.4	NA	NA	NA	NA	rs113211514	0.03	0.03	0.024	0.0163738	0.0527	NA	0.0403	0.0008	NA	0.05	NA	0.06	0.002	0.0283	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011847	NA	NA	0.040717	0.008632	NA	0.08	NA	6.5449496
998	10	25313818	25313818	C	T	exonic	THNSL1	NA	synonymous SNV	THNSL1:NM_024838:exon3:c.C1666T:p.L556L	exonic	ENSG00000185875	NA	synonymous SNV	ENSG00000185875:ENST00000376356:exon3:c.C1666T:p.L556L,ENSG00000185875:ENST00000524413:exon3:c.C1666T:p.L556L	Score=649;Name=lod=579	NA	10p12.1	Score=886;Name=V$POU3F2_02	NA	NA	NA	rs7086282	0.49	0.49	0.493	0.508986	0.3459	0.4861	0.5389	0.6936	0.4294	0.35	0.49	0.51	0.69	0.4221	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.067204	NA	NA	0.353953	0.638448	ID=COSM146908;OCCURENCE=1(stomach)	0.522	NA	6.5447136
998	3	14939479	14939479	G	T	exonic	FGD5	NA	synonymous SNV	FGD5:NM_152536:exon6:c.G2943T:p.L981L	exonic	ENSG00000154783	NA	synonymous SNV	ENSG00000154783:ENST00000285046:exon6:c.G2943T:p.L981L,ENSG00000154783:ENST00000543601:exon6:c.G2220T:p.L740L	Score=355;Name=lod=37	NA	3p25.1	NA	NA	NA	NA	rs2164356	0.67	0.67	0.671	0.680511	0.7068	0.5942	0.6859	0.7587	0.6329	0.7	0.56	0.69	0.74	0.6915	0.76	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.007	T	0.000	T	.	1.169	9.758	1.83	1.063	0.915	2.912	1.169378	NA	NA	0.723678	0.758695	NA	0.667	NA	6.5446886
998	6	12123049	12123049	G	A	exonic	HIVEP1	NA	synonymous SNV	HIVEP1:NM_002114:exon4:c.G3021A:p.Q1007Q	exonic	ENSG00000095951	NA	synonymous SNV	ENSG00000095951:ENST00000379388:exon4:c.G3021A:p.Q1007Q	Score=346;Name=lod=34	NA	6p24.1	NA	NA	NA	NA	rs2228219	0.04	0.04	0.042	0.0499201	0.0408	0.0248	0.049	0.0855	0.0378	0.04	0.02	0.06	0.07	0.0422	0.074	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.698642	NA	NA	0.039	0.074055	NA	0.036	NA	6.5446666
998	17	38643385	38643385	G	A	exonic	TNS4	NA	synonymous SNV	TNS4:NM_032865:exon4:c.C1191T:p.S397S	exonic	ENSG00000131746	NA	synonymous SNV	ENSG00000131746:ENST00000254051:exon4:c.C1191T:p.S397S	NA	NA	17q21.2	NA	Name=AP-2alpha,Pol2	NA	NA	rs8071312	0.06	0.06	0.064	0.0551118	0.0447	0.001	0.0346	0.1498	0.0082	0.04	NA	0.03	0.18	0.0385	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.465401	NA	NA	0.040581	0.147299	NA	0.051	NA	6.5428856
998	17	38179492	38179492	A	G	exonic	MED24	NA	synonymous SNV	MED24:NM_001079518:exon19:c.T2103C:p.I701I,MED24:NM_001267797:exon19:c.T2103C:p.I701I,MED24:NM_014815:exon20:c.T2142C:p.I714I	exonic	ENSG00000008838	NA	synonymous SNV	ENSG00000008838:ENST00000356271:exon19:c.T2103C:p.I701I,ENSG00000008838:ENST00000394126:exon19:c.T2217C:p.I739I,ENSG00000008838:ENST00000394127:exon19:c.T2103C:p.I701I,ENSG00000008838:ENST00000535071:exon19:c.T1992C:p.I664I,ENSG00000008838:ENST00000394128:exon20:c.T2142C:p.I714I,ENSG00000008838:ENST00000501516:exon20:c.T2199C:p.I733I	Score=603;Name=lod=376	Name=Multiple myeloma (hyperdiploidy)	17q21.1	NA	NA	NA	NA	rs2302777	0.32	0.32	0.291	0.314497	0.3668	0.4226	0.4135	0.0537	0.4315	0.36	0.41	0.41	0.07	0.382	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.219966	NA	NA	0.375	0.104857	NA	0.355	NA	6.5428666
998	1	162344102	162344102	C	T	exonic	C1orf111	NA	synonymous SNV	C1orf111:NM_182581:exon3:c.G522A:p.R174R	exonic	ENSG00000171722	NA	synonymous SNV	ENSG00000171722:ENST00000367935:exon3:c.G522A:p.R174R	Score=272;Name=lod=17	NA	1q23.3	NA	NA	Name=3	NA	rs2282397	0.38	0.38	0.371	0.340455	0.3817	0.5089	0.4222	0.1634	0.3057	0.39	0.51	0.4	0.18	0.3674	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.144955	NA	NA	0.375349	0.21902	NA	0.268	NA	6.5422176
998	4	48172266	48172266	G	A	exonic	TEC	NA	synonymous SNV	TEC:NM_003215:exon5:c.C453T:p.S151S	exonic	ENSG00000135605	NA	synonymous SNV	ENSG00000135605:ENST00000381501:exon5:c.C453T:p.S151S	Score=648;Name=lod=573	NA	4p12	Score=894;Name=V$NKX3A_01	NA	NA	NA	rs2271173	0.52	0.52	0.51	0.520767	0.3579	0.8929	0.4942	0.3381	0.5706	0.36	0.92	0.45	0.36	0.4227	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.571884	NA	NA	0.344245	0.335	NA	0.457	NA	6.5418216
998	12	11061122	11061122	T	C	exonic	TAS2R13	NA	nonsynonymous SNV	TAS2R13:NM_023920:exon1:c.A776G:p.N259S	exonic	ENSG00000212128	NA	nonsynonymous SNV	ENSG00000212128:ENST00000390677:exon1:c.A776G:p.N259S	NA	NA	12p13.2	NA	NA	NA	NA	rs1015443	0.54	0.54	0.498	0.520367	0.6243	0.7242	0.5908	0.1528	0.6503	0.62	0.72	0.61	0.16	0.5853	0.72	0.34	T	0.04	B	0.129	B	0.788	N	1.000	P	0.285	N	5.73	T	-1.154	T	0.000	T	0.055	0.067	4.365	0.219	-0.077	-1.097	4.853	0.067332	NA	1	0.581977	0.219473	NA	0.449	NA	6.5417564
998	15	31117210	31117210	G	A	ncRNA_intronic	HERC2P10	NA	NA	NA	ncRNA_intronic	ENSG00000259845	NA	NA	NA	Score=423;Name=lod=70	NA	15q13.2	NA	NA	Name=5	NA	rs798126	0.15	0.15	0.155	0.165535	0.1252	0.0278	0.1124	0.3865	0.0879	0.12	0.03	0.14	0.36	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.304552	NA	NA	NA	NA	NA	0.109	NA	6.5414666
998	10	101657880	101657880	G	A	exonic	DNMBP	NA	synonymous SNV	DNMBP:NM_015221:exon9:c.C2883T:p.N961N	exonic	ENSG00000107554	NA	synonymous SNV	ENSG00000107554:ENST00000543621:exon6:c.C621T:p.N207N,ENSG00000107554:ENST00000324109:exon9:c.C2883T:p.N961N,ENSG00000107554:ENST00000342239:exon9:c.C2883T:p.N961N	Score=584;Name=lod=314	NA	10q24.2	NA	NA	NA	Score=78;Name=315415_0_+_78	rs7919323	0.28	0.28	0.252	0.274561	0.3946	0.2183	0.3256	0.1589	0.3292	0.38	0.22	0.36	0.13	0.3455	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.278688	1.278688	NA	0.386279	0.201997	NA	0.312	NA	6.5402876
998	4	187628054	187628054	C	G	exonic	FAT1	NA	synonymous SNV	FAT1:NM_005245:exon2:c.G2928C:p.V976V	exonic	ENSG00000083857	NA	synonymous SNV	ENSG00000083857:ENST00000441802:exon2:c.G2928C:p.V976V	Score=469;Name=lod=107	NA	4q35.2	NA	NA	NA	NA	rs114279527	0.02	0.02	0.025	0.0241613	0.0517	NA	0.0274	NA	0.0511	0.05	NA	0.03	NA	0.0338	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.17193	NA	NA	0.042574	0.007467	NA	0.029	NA	6.5385926
998	10	100147060	100147060	A	G	exonic	PYROXD2	NA	synonymous SNV	PYROXD2:NM_032709:exon14:c.T1452C:p.F484F	exonic	ENSG00000119943	NA	synonymous SNV	ENSG00000119943:ENST00000370575:exon14:c.T1452C:p.F484F	Score=511;Name=lod=159	Name=Metabolite levels	10q24.2	NA	NA	NA	NA	rs4345897	0.48	0.48	0.468	0.521166	0.334	0.5615	0.4755	0.6422	0.5409	0.34	0.57	0.45	0.63	0.4406	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.306818	NA	NA	0.35407	0.584203	NA	0.391	NA	6.5379966
998	4	153896765	153896765	G	C	exonic	FHDC1	NA	synonymous SNV	FHDC1:NM_033393:exon11:c.G2322C:p.S774S	exonic	ENSG00000137460	NA	synonymous SNV	ENSG00000137460:ENST00000260008:exon11:c.G2322C:p.S774S,ENSG00000137460:ENST00000511601:exon12:c.G2322C:p.S774S	Score=440;Name=lod=82	NA	4q31.3	NA	NA	NA	NA	rs7688776	0.07	0.07	0.066	0.0567093	0.0427	0.0298	0.0317	0.1233	0.0266	0.05	0.04	0.04	0.14	0.0463	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.975064	NA	NA	0.040233	0.110304	NA	0.101	NA	6.5374336
998	11	6655433	6655433	G	A	exonic	DCHS1	NA	synonymous SNV	DCHS1:NM_003737:exon3:c.C1902T:p.H634H	exonic	ENSG00000166341	NA	synonymous SNV	ENSG00000166341:ENST00000299441:exon3:c.C1902T:p.H634H	Score=489;Name=lod=129	NA	11p15.4	Score=787;Name=V$HTF_01	NA	NA	NA	rs997263	0.37	0.37	0.352	0.346446	0.3777	0.4296	0.3631	0.2572	0.3374	0.39	0.46	0.37	0.23	0.375	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.725361	NA	NA	0.376862	0.290095	NA	0.435	NA	6.5371046
998	4	187454951	187454951	T	C	exonic	MTNR1A	NA	synonymous SNV	MTNR1A:NM_005958:exon2:c.A945G:p.T315T	exonic	ENSG00000168412	NA	synonymous SNV	ENSG00000168412:ENST00000307161:exon2:c.A945G:p.T315T	Score=346;Name=lod=34	NA	4q35.2	NA	NA	NA	NA	rs8192551	0.06	0.06	0.065	0.0666933	0.0408	0.0784	0.049	0.1135	0.0307	0.04	0.09	0.06	0.08	0.0439	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.942545	NA	NA	0.045	0.107354	NA	0.109	NA	6.5369666
998	14	64496763	64496763	T	C	exonic	SYNE2	NA	synonymous SNV	SYNE2:NM_015180:exon44:c.T6865C:p.L2289L,SYNE2:NM_182914:exon44:c.T6865C:p.L2289L	exonic	ENSG00000054654	NA	synonymous SNV	ENSG00000054654:ENST00000554584:exon43:c.T6865C:p.L2289L,ENSG00000054654:ENST00000344113:exon44:c.T6865C:p.L2289L,ENSG00000054654:ENST00000358025:exon44:c.T6865C:p.L2289L	NA	NA	14q23.2	NA	NA	NA	NA	rs11850509	0.08	0.08	0.076	0.0880591	0.0298	0.0575	0.0893	0.1891	0.0419	0.03	0.06	0.09	0.17	0.0577	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.525687	NA	NA	0.043585	0.140907	NA	0.087	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118545.1;CLNDSDB=.;CLNDSDBID=.	6.5355816
998	15	89169653	89169653	G	A	exonic	AEN	NA	synonymous SNV	AEN:NM_022767:exon2:c.G213A:p.A71A	exonic	ENSG00000181026	NA	synonymous SNV	ENSG00000181026:ENST00000332810:exon2:c.G213A:p.A71A,ENSG00000181026:ENST00000379231:exon2:c.G213A:p.A71A,ENSG00000181026:ENST00000559528:exon2:c.G213A:p.A71A	NA	NA	15q26.1	NA	Name=Pol2	NA	NA	rs34649587	0.03	0.03	0.033	0.0403355	0.0457	0.002	0.0245	0.0461	0.0777	0.05	0.0017	0.03	0.03	0.0447	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.24588	NA	NA	0.041075	0.040719	NA	0.087	NA	6.5351916
998	18	23872235	23872235	A	G	exonic	TAF4B	NA	nonsynonymous SNV	TAF4B:NM_005640:exon8:c.A1616G:p.N539S	exonic	ENSG00000141384	NA	nonsynonymous SNV	ENSG00000141384:ENST00000269142:exon8:c.A1616G:p.N539S,ENSG00000141384:ENST00000400466:exon8:c.A1616G:p.N539S,ENSG00000141384:ENST00000418698:exon8:c.A1616G:p.N539S,ENSG00000141384:ENST00000578121:exon8:c.A1631G:p.N544S	NA	NA	18q11.2	NA	NA	NA	NA	rs12963653	0.15	0.15	0.143	0.121605	0.2913	0.0546	0.1268	0.056	0.1012	0.3	0.04	0.13	0.06	0.2186	0.3	0.82	T	0.0	B	0.001	B	0.509	N	1.000	P	0.55	N	2.01	T	-0.964	T	0.000	T	0.008	0.986	9.026	-1.79	-0.301	0.474	2.737	0.986046	NA	0.22	0.288289	0.093914	NA	0.188	NA	6.5351444
999	22	46794475	46794475	T	C	exonic	CELSR1	NA	synonymous SNV	CELSR1:NM_014246:exon11:c.A5472G:p.G1824G	exonic	ENSG00000075275	NA	synonymous SNV	ENSG00000075275:ENST00000262738:exon11:c.A5472G:p.G1824G	Score=336;Name=lod=31	NA	22q13.31	NA	NA	NA	NA	rs45604542	0.02	0.02	0.015	0.0195687	0.0487	NA	0.0288	0.0053	0.0225	0.04	NA	0.03	0.01	0.0365	0.048	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.487023	NA	NA	0.047674	0.010894	NA	0.022	NA	6.5337926
999	6	100964158	100964158	G	A	exonic	ASCC3	NA	synonymous SNV	ASCC3:NM_006828:exon39:c.C5973T:p.T1991T	exonic	ENSG00000112249	NA	synonymous SNV	ENSG00000112249:ENST00000369162:exon39:c.C5973T:p.T1991T	Score=343;Name=lod=33	NA	6q16.3	NA	NA	NA	NA	rs33988845	0.04	0.04	0.037	0.0397364	0.0477	NA	0.0447	0.0779	0.0174	0.05	NA	0.05	0.07	0.042	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.01331	NA	NA	0.044419	0.056287	NA	0.072	NA	6.5325476
999	6	139488160	139488160	C	T	exonic	HECA	NA	synonymous SNV	HECA:NM_016217:exon2:c.C1011T:p.F337F	exonic	ENSG00000112406	NA	synonymous SNV	ENSG00000112406:ENST00000367658:exon2:c.C1011T:p.F337F	NA	NA	6q24.1	Score=849;Name=V$GR_Q6	NA	NA	NA	rs34476011	0.03	0.03	0.03	0.0361422	0.0467	NA	0.036	0.0635	0.0256	0.04	NA	0.05	0.06	0.0388	0.065	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.790854	NA	NA	0.048721	0.065365	NA	0.022	NA	6.5324456
999	8	19316086	19316086	G	A	exonic	CSGALNACT1	NA	synonymous SNV	CSGALNACT1:NM_001130518:exon5:c.C702T:p.H234H,CSGALNACT1:NM_018371:exon5:c.C702T:p.H234H	exonic	ENSG00000147408	NA	synonymous SNV	ENSG00000147408:ENST00000522854:exon3:c.C702T:p.H234H,ENSG00000147408:ENST00000311540:exon4:c.C702T:p.H234H,ENSG00000147408:ENST00000397998:exon4:c.C702T:p.H234H,ENSG00000147408:ENST00000519222:exon4:c.C702T:p.H234H,ENSG00000147408:ENST00000544602:exon4:c.C702T:p.H234H,ENSG00000147408:ENST00000332246:exon5:c.C702T:p.H234H,ENSG00000147408:ENST00000454498:exon5:c.C702T:p.H234H	Score=346;Name=lod=34	NA	8p21.3	NA	Name=GATA-2,TCF4	NA	NA	rs12155539	0.47	0.47	0.456	0.458866	0.3519	0.8581	0.5576	0.1997	0.4376	0.34	0.85	0.51	0.21	0.4217	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.936389	NA	NA	0.36093	0.221743	ID=COSM1455949;OCCURENCE=1(large_intestine)	0.29	NA	6.5321366
999	10	14976414	14976414	G	A	exonic	DCLRE1C	NA	synonymous SNV	DCLRE1C:NM_022487:exon7:c.C298T:p.L100L,DCLRE1C:NM_001033855:exon8:c.C643T:p.L215L,DCLRE1C:NM_001033857:exon9:c.C283T:p.L95L,DCLRE1C:NM_001033858:exon10:c.C283T:p.L95L	exonic	ENSG00000152457	NA	synonymous SNV	ENSG00000152457:ENST00000357717:exon6:c.C298T:p.L100L,ENSG00000152457:ENST00000378249:exon6:c.C298T:p.L100L,ENSG00000152457:ENST00000378246:exon7:c.C298T:p.L100L,ENSG00000152457:ENST00000378278:exon8:c.C643T:p.L215L,ENSG00000152457:ENST00000378289:exon8:c.C643T:p.L215L,ENSG00000152457:ENST00000453695:exon8:c.C283T:p.L95L,ENSG00000152457:ENST00000378254:exon9:c.C283T:p.L95L,ENSG00000152457:ENST00000378258:exon9:c.C283T:p.L95L,ENSG00000152457:ENST00000418843:exon9:c.C205T:p.L69L,ENSG00000152457:ENST00000378255:exon10:c.C283T:p.L95L,ENSG00000152457:ENST00000396817:exon10:c.C283T:p.L95L	Score=550;Name=lod=229	NA	10p13	NA	NA	NA	NA	rs7076862	0.41	0.41	0.409	0.5	0.3638	0.3929	0.428	0.6944	0.5389	0.31	0.39	0.37	0.62	0.4187	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.290715	1.290715	NA	0.352791	0.638901	NA	0.384	CLINSIG=non-pathogenic;CLNDBN=Severe_combined_immunodeficiency_disease;CLNREVSTAT=single;CLNACC=RCV000029658.1;CLNDSDB=MedGen:SNOMED_CT;CLNDSDBID=C0085110:31323000	6.5313756
999	17	4718776	4718776	G	A	exonic	PLD2	NA	synonymous SNV	PLD2:NM_001243108:exon13:c.G1179A:p.E393E,PLD2:NM_002663:exon13:c.G1179A:p.E393E	exonic	ENSG00000129219	NA	synonymous SNV	ENSG00000129219:ENST00000263088:exon13:c.G1179A:p.E393E,ENSG00000129219:ENST00000572940:exon13:c.G1179A:p.E393E	Score=470;Name=lod=108	NA	17p13.2	NA	Name=CTCF_(SC-5916),CTCF_(C-20),Rad21,CTCF	Name=21	NA	rs1132448	0.63	0.63	0.597	0.6252	0.7028	0.6349	0.7435	0.388	0.772	0.72	0.63	0.75	0.42	0.7128	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.474111	NA	NA	0.720116	0.445302	NA	0.674	NA	6.5309506
999	22	46664431	46664431	C	G	exonic	TTC38	NA	synonymous SNV	TTC38:NM_017931:exon2:c.C54G:p.L18L	exonic	ENSG00000075234	NA	synonymous SNV	ENSG00000075234:ENST00000381031:exon2:c.C54G:p.L18L,ENSG00000075234:ENST00000417709:exon2:c.C54G:p.L18L,ENSG00000075234:ENST00000421359:exon2:c.C54G:p.L18L,ENSG00000075234:ENST00000445282:exon2:c.C54G:p.L18L	NA	NA	22q13.31	NA	Name=E2F6_(H-50)	NA	NA	rs9627359	0.12	0.12	0.122	0.148363	0.0358	0.001	0.062	0.4788	0.0307	0.02	NA	0.07	0.45	0.0645	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.320612	1.320612	NA	0.035581	0.402328	NA	0.181	NA	6.5307856
999	13	23824783	23824783	T	G	exonic	SGCG	NA	synonymous SNV	SGCG:NM_000231:exon4:c.T312G:p.L104L	exonic	ENSG00000102683	NA	synonymous SNV	ENSG00000102683:ENST00000218867:exon4:c.T312G:p.L104L,ENSG00000102683:ENST00000537476:exon5:c.T312G:p.L104L,ENSG00000102683:ENST00000545013:exon5:c.T312G:p.L104L	Score=374;Name=lod=44	NA	13q12.12	NA	NA	NA	NA	rs1800351	0.52	0.52	0.532	0.52476	0.333	0.7014	0.4236	0.7035	0.3701	0.35	0.69	0.38	0.67	0.4343	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.512271	NA	NA	0.368605	0.671357	NA	0.543	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000078404.2;CLNDSDB=.;CLNDSDBID=.	6.5307616
999	16	31384648	31384648	C	T	exonic	ITGAX	NA	synonymous SNV	ITGAX:NM_000887:exon20:c.C2445T:p.Y815Y	exonic	ENSG00000140678	NA	synonymous SNV	ENSG00000140678:ENST00000268296:exon20:c.C2445T:p.Y815Y,ENSG00000140678:ENST00000562522:exon20:c.C2445T:p.Y815Y	Score=387;Name=lod=50	NA	16p11.2	NA	NA	NA	NA	rs12448775	0.04	0.04	0.019	0.0401358	0.0388	0.001	0.183	0.0113	0.0194	0.04	0.0017	0.14	0.02	0.0578	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.985777	NA	NA	0.040116	0.018662	NA	0.014	NA	6.5299506
999	7	150553605	150553605	C	T	exonic	ABP1	NA	nonsynonymous SNV	ABP1:NM_001091:exon2:c.C47T:p.T16M,ABP1:NM_001272072:exon2:c.C47T:p.T16M	exonic	ENSG00000002726	NA	nonsynonymous SNV	ENSG00000002726:ENST00000360937:exon2:c.C47T:p.T16M,ENSG00000002726:ENST00000416793:exon2:c.C47T:p.T16M,ENSG00000002726:ENST00000460213:exon2:c.C47T:p.T16M,ENSG00000002726:ENST00000483043:exon3:c.C47T:p.T16M,ENSG00000002726:ENST00000467291:exon4:c.C47T:p.T16M,ENSG00000002726:ENST00000493429:exon4:c.C47T:p.T16M	NA	NA	7q36.1	NA	NA	NA	NA	rs10156191	0.29	0.29	0.302	0.312899	0.2654	0.122	0.2464	0.5613	0.2699	0.26	0.12	0.25	0.56	0.2713	0.56	0.25	T	0.001	B	0.001	B	0.158	N	1.000	P	-0.895	N	4.4	T	-0.914	T	0.000	T	0.271	0.99	9.043	-0.636	-0.572	0.182	10.143	0.99018	NA	0.13	0.266707	0.508273	NA	0.362	NA	6.5299264
999	11	118952173	118952173	A	G	exonic	VPS11	NA	unknown	UNKNOWN	exonic	ENSG00000160695	NA	nonsynonymous SNV	ENSG00000160695:ENST00000300793:exon17:c.A2663G:p.K888R	Score=589;Name=lod=329	NA	11q23.3	Score=1000;Name=V$NKX25_01	NA	NA	NA	rs15818	0.34	0.34	0.363	0.354633	0.3618	0.2044	0.3343	0.4841	0.3415	0.35	0.17	0.35	0.51	0.3639	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.864465	2.864465	0.47	0.411292	0.465319	NA	0.42	NA	6.5296747
999	3	10065426	10065426	C	T	ncRNA_exonic	CIDECP	NA	NA	NA	ncRNA_exonic	ENSG00000186162	NA	NA	NA	NA	NA	3p25.3	NA	Name=JunD,eGFP-JunB,c-Jun,BCL3	Name=97	NA	rs6803517	0.2	0.2	0.219	0.208067	0.1372	0.0476	0.1657	0.4607	0.135	0.14	0.07	0.18	0.46	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.789067	NA	NA	NA	NA	NA	0.355	NA	6.5294666
999	8	144999642	144999642	A	C	exonic	PLEC	NA	synonymous SNV	PLEC:NM_201378:exon31:c.T4413G:p.A1471A,PLEC:NM_201379:exon31:c.T4389G:p.A1463A,PLEC:NM_201380:exon31:c.T4866G:p.A1622A,PLEC:NM_201381:exon31:c.T4359G:p.A1453A,PLEC:NM_201382:exon31:c.T4455G:p.A1485A,PLEC:NM_201383:exon31:c.T4467G:p.A1489A,PLEC:NM_201384:exon31:c.T4455G:p.A1485A,PLEC:NM_000445:exon32:c.T4536G:p.A1512A	exonic	ENSG00000178209	NA	synonymous SNV	ENSG00000178209:ENST00000322810:exon31:c.T4866G:p.A1622A,ENSG00000178209:ENST00000345136:exon31:c.T4455G:p.A1485A,ENSG00000178209:ENST00000354589:exon31:c.T4455G:p.A1485A,ENSG00000178209:ENST00000354958:exon31:c.T4389G:p.A1463A,ENSG00000178209:ENST00000356346:exon31:c.T4413G:p.A1471A,ENSG00000178209:ENST00000357649:exon31:c.T4467G:p.A1489A,ENSG00000178209:ENST00000398774:exon31:c.T4359G:p.A1453A,ENSG00000178209:ENST00000527096:exon31:c.T4524G:p.A1508A,ENSG00000178209:ENST00000436759:exon32:c.T4536G:p.A1512A	Score=399;Name=lod=56	NA	8q24.3	NA	NA	NA	NA	rs56117011	0.25	0.25	0.203	0.232628	0.4274	0.1429	0.2968	0.034	0.3476	0.42	0.16	0.3	0.04	0.3357	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.485169	NA	NA	0.37472	0.091067	NA	0.159	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000078866.3;CLNDSDB=.;CLNDSDBID=.	6.5288466
999	3	10067794	10067794	A	G	ncRNA_exonic	CIDECP	NA	NA	NA	ncRNA_exonic	ENSG00000186162	NA	NA	NA	Score=646;Name=lod=564	NA	3p25.3	Score=699;Name=V$BRACH_01	NA	NA	NA	rs35993975	0.13	0.13	0.108	0.128994	0.1382	0.0476	0.1427	0.1747	0.1319	0.15	0.07	0.16	0.17	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.09123	NA	NA	NA	NA	NA	0.254	NA	6.5284666
999	4	16258155	16258155	G	A	ncRNA_exonic	TAPT1-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000242358,ENSG00000263327	NA	NA	NA	Score=325;Name=lod=28	NA	4p15.32	NA	Name=CTCF_(SC-5916)	NA	NA	rs2940	0.12	0.12	0.109	0.138778	0.1382	0.0109	0.1556	0.233	0.1319	0.15	0.01	0.16	0.18	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.454823	1.454823	NA	NA	NA	NA	0.08	NA	6.5284666
999	2	179650701	179650701	C	T	exonic	TTN	NA	synonymous SNV	TTN:NM_003319:exon13:c.G2106A:p.E702E,TTN:NM_133432:exon13:c.G2106A:p.E702E,TTN:NM_133437:exon13:c.G2106A:p.E702E,TTN:NM_001256850:exon14:c.G2244A:p.E748E,TTN:NM_001267550:exon14:c.G2244A:p.E748E,TTN:NM_133378:exon14:c.G2244A:p.E748E,TTN:NM_133379:exon14:c.G2244A:p.E748E	exonic	ENSG00000155657	NA	synonymous SNV	ENSG00000155657:ENST00000342175:exon13:c.G2106A:p.E702E,ENSG00000155657:ENST00000359218:exon13:c.G2106A:p.E702E,ENSG00000155657:ENST00000460472:exon13:c.G2106A:p.E702E,ENSG00000155657:ENST00000342992:exon14:c.G2244A:p.E748E,ENSG00000155657:ENST00000360870:exon14:c.G2244A:p.E748E,ENSG00000155657:ENST00000589042:exon14:c.G2244A:p.E748E,ENSG00000155657:ENST00000591111:exon14:c.G2244A:p.E748E	Score=284;Name=lod=19	NA	2q31.2	NA	NA	NA	NA	rs6715406	0.23	0.23	0.223	0.204673	0.4135	0.0685	0.1916	0.1445	0.2209	0.42	0.06	0.23	0.15	0.3192	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.439581	NA	NA	0.405698	0.199955	NA	0.304	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=mult|single;CLNACC=RCV000040044.2|RCV000125846.1;CLNDSDB=.|.;CLNDSDBID=.|.	6.5282686
999	6	122001385	122001385	C	G	intergenic	GJA1,HSF2	dist=230512;dist=719311	NA	NA	ncRNA_exonic	ENSG00000219135	NA	NA	NA	Score=722;Name=lod=1141	NA	6q22.31	NA	Name=CTCF	Name=4	NA	rs9320839	0.42	0.42	0.361	0.384385	0.4722	0.4663	0.3458	0.3328	0.3067	0.45	0.49	0.36	0.32	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.738823	2.738823	NA	NA	NA	NA	0.435	NA	6.5278
999	15	56032872	56032872	G	A	exonic	PRTG	NA	synonymous SNV	PRTG:NM_173814:exon2:c.C105T:p.C35C	exonic	ENSG00000166450	NA	synonymous SNV	ENSG00000166450:ENST00000389286:exon2:c.C105T:p.C35C,ENSG00000166450:ENST00000561292:exon2:c.C105T:p.C35C	Score=590;Name=lod=332	NA	15q21.3	NA	NA	NA	NA	rs77118243	0.02	0.02	0.015	0.0159744	0.0467	NA	0.0288	0.0023	0.0102	0.05	NA	0.03	0.0041	0.0376	0.055	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.552943	NA	NA	0.054795	0.012568	NA	0.043	NA	6.5275716
999	7	100064719	100064719	A	G	exonic	TSC22D4	NA	synonymous SNV	TSC22D4:NM_030935:exon5:c.T1051C:p.L351L	exonic	ENSG00000166925	NA	synonymous SNV	ENSG00000166925:ENST00000300181:exon5:c.T1051C:p.L351L,ENSG00000166925:ENST00000393991:exon5:c.T334C:p.L112L	Score=615;Name=lod=423	NA	7q22.1	Score=795;Name=V$STAT1_01	NA	NA	NA	rs7806537	0.3	0.3	0.304	0.336262	0.3956	0.0972	0.2651	0.4478	0.4213	0.39	0.1	0.28	0.4	0.3572	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.988372	NA	NA	0.387558	0.436223	ID=COSM451970;OCCURENCE=1(breast)	0.355	NA	6.5263086
999	5	82789647	82789647	A	G	exonic	VCAN	NA	synonymous SNV	VCAN:NM_001126336:exon5:c.A645G:p.V215V,VCAN:NM_001164097:exon5:c.A645G:p.V215V,VCAN:NM_001164098:exon5:c.A645G:p.V215V,VCAN:NM_004385:exon5:c.A645G:p.V215V	exonic	ENSG00000038427	NA	synonymous SNV	ENSG00000038427:ENST00000265077:exon5:c.A645G:p.V215V,ENSG00000038427:ENST00000342785:exon5:c.A645G:p.V215V,ENSG00000038427:ENST00000343200:exon5:c.A645G:p.V215V,ENSG00000038427:ENST00000502527:exon5:c.A645G:p.V215V,ENSG00000038427:ENST00000512590:exon5:c.A501G:p.V167V,ENSG00000038427:ENST00000513960:exon5:c.A645G:p.V215V,ENSG00000038427:ENST00000513984:exon5:c.A645G:p.V215V	Score=387;Name=lod=50	NA	5q14.2	NA	NA	Name=2	NA	rs4470745	0.27	0.27	0.262	0.238419	0.4135	0.0893	0.281	0.2292	0.1943	0.41	0.08	0.31	0.23	0.321	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.114722	NA	NA	0.406163	0.241943	NA	0.283	NA	6.5260036
999	18	7023371	7023371	A	G	exonic	LAMA1	NA	synonymous SNV	LAMA1:NM_005559:exon19:c.T2493C:p.C831C	exonic	ENSG00000101680	NA	synonymous SNV	ENSG00000101680:ENST00000389658:exon19:c.T2493C:p.C831C	Score=525;Name=lod=182	NA	18p11.31	Score=865;Name=V$TAL1ALPHAE47_01	NA	NA	NA	rs684634	0.43	0.43	0.444	0.4373	0.3807	0.1429	0.389	0.8533	0.271	0.39	0.17	0.35	0.83	0.3801	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.193609	NA	NA	0.379884	0.753291	ID=COSM1179774;OCCURENCE=1(prostate)	0.42	NA	6.5259826
999	13	20762956	20762956	A	G	UTR3	GJB2	NM_004004:c.*84T>C	NA	NA	UTR3	ENSG00000165474	ENST00000382848:c.*84T>C,ENST00000382844:c.*84T>C	NA	NA	NA	NA	13q12.11	NA	Name=Max,CEBPB	Name=4	NA	rs3751385	0.67	0.67	0.631	0.686701	0.8082	0.5982	0.67	0.5325	0.8732	0.82	0.55	0.72	0.54	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.268284	NA	NA	NA	NA	NA	0.659	CLINSIG=non-pathogenic;CLNDBN=Deafness\x2c_autosomal_recessive_1A;CLNREVSTAT=single;CLNACC=RCV000029940.1;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet;CLNDSDBID=NBK1272:C2673759:220290:ORPHA90636	6.5251334
1000	6	7585967	7585967	G	C	exonic	DSP	NA	synonymous SNV	DSP:NM_001008844:exon24:c.G6675C:p.G2225G,DSP:NM_004415:exon24:c.G8472C:p.G2824G	exonic	ENSG00000096696	NA	synonymous SNV	ENSG00000096696:ENST00000379802:exon24:c.G8472C:p.G2824G,ENSG00000096696:ENST00000418664:exon24:c.G6675C:p.G2225G	Score=461;Name=lod=100	NA	6p24.3	Score=787;Name=V$PAX5_02	NA	NA	NA	rs2744380	0.71	0.71	0.703	0.709465	0.7127	0.8046	0.7478	0.6051	0.7219	0.7	0.8	0.74	0.59	0.7117	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.493059	NA	NA	0.717326	0.630958	NA	0.645	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000038104.1;CLNDSDB=.;CLNDSDBID=.	6.5249406
1000	15	42171654	42171654	G	A	exonic	SPTBN5	NA	synonymous SNV	SPTBN5:NM_016642:exon16:c.C2986T:p.L996L	exonic	ENSG00000137877	NA	synonymous SNV	ENSG00000137877:ENST00000320955:exon16:c.C2986T:p.L996L	Score=284;Name=lod=19	NA	15q15.1	NA	NA	NA	NA	rs56379301	0.03	0.03	0.015	0.0307508	0.0368	0.0129	0.0519	NA	0.0695	0.04	0.01	0.05	NA	0.0688	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.608746	NA	NA	0.036204	0.006683	NA	NA	NA	6.5248626
1000	14	97299853	97299853	A	G	exonic	VRK1	NA	synonymous SNV	VRK1:NM_003384:exon2:c.A45G:p.A15A	exonic	ENSG00000100749	NA	synonymous SNV	ENSG00000100749:ENST00000216639:exon2:c.A45G:p.A15A	NA	NA	14q32.2	NA	Name=MafK_(ab50322)	NA	NA	rs2145635	0.28	0.28	0.257	0.289537	0.3936	0.1161	0.3401	0.211	0.4315	0.4	0.12	0.35	0.22	0.3565	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.674827	NA	NA	0.391835	0.211984	NA	0.254	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118847.2;CLNDSDB=.;CLNDSDBID=.	6.5247316
1000	19	9080462	9080462	C	G	exonic	MUC16	NA	nonsynonymous SNV	MUC16:NM_024690:exon2:c.G9569C:p.S3190T	exonic	ENSG00000181143	NA	nonsynonymous SNV	ENSG00000181143:ENST00000397910:exon2:c.G9569C:p.S3190T	NA	NA	19p13.2	NA	NA	NA	NA	rs2547065	0.62	0.62	0.625	0.604433	0.5994	0.8125	0.611	0.4304	0.6258	0.6	0.83	0.6	0.43	0.5996	0.83	0	D	0.0	B	0.0	B	.	.	.	.	.	.	4.68	T	-1.092	T	0.000	T	0.02	-0.554	1.495	0.926	-0.035	-0.194	4.819	-0.553583	NA	1	0.610382	0.475026	NA	0.514	NA	6.5239514
1000	2	202436684	202436684	T	A	exonic	ALS2CR11	NA	synonymous SNV	ALS2CR11:NM_001168216:exon8:c.A813T:p.P271P,ALS2CR11:NM_001168217:exon8:c.A813T:p.P271P,ALS2CR11:NM_001168221:exon8:c.A813T:p.P271P,ALS2CR11:NM_152525:exon8:c.A813T:p.P271P	exonic	ENSG00000155754	NA	synonymous SNV	ENSG00000155754:ENST00000286195:exon8:c.A813T:p.P271P,ENSG00000155754:ENST00000439140:exon8:c.A813T:p.P271P,ENSG00000155754:ENST00000439802:exon8:c.A813T:p.P271P,ENSG00000155754:ENST00000450242:exon8:c.A813T:p.P271P	Score=415;Name=lod=65	NA	2q33.1	NA	NA	NA	NA	rs55872838	0.04	0.04	0.039	0.0417332	0.0477	NA	0.0476	0.0915	0.0072	0.05	NA	0.04	0.06	0.0413	0.073	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.298618	1.298618	NA	0.053721	0.073536	NA	0.029	NA	6.5239456
1000	17	80159566	80159566	T	C	exonic	CCDC57	NA	synonymous SNV	CCDC57:NM_198082:exon2:c.A255G:p.E85E	exonic	ENSG00000176155	NA	synonymous SNV	ENSG00000176155:ENST00000389641:exon2:c.A255G:p.E85E,ENSG00000176155:ENST00000392347:exon2:c.A255G:p.E85E,ENSG00000176155:ENST00000392343:exon3:c.A255G:p.E85E	Score=325;Name=lod=28	NA	17q25.3	NA	Name=ZNF263	Name=6	NA	rs8072670	0.83	0.83	0.825	0.823482	0.7087	0.9276	0.817	0.8828	0.7587	0.71	0.93	0.8	0.89	0.7464	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.099626	NA	NA	0.688044	0.871276	NA	0.761	NA	6.5235226
1000	1	95367773	95367773	A	G	exonic	CNN3	NA	synonymous SNV	CNN3:NM_001839:exon4:c.T288C:p.Y96Y	exonic	ENSG00000117519	NA	synonymous SNV	ENSG00000117519:ENST00000370206:exon4:c.T288C:p.Y96Y,ENSG00000117519:ENST00000415017:exon4:c.T165C:p.Y55Y,ENSG00000117519:ENST00000545882:exon4:c.T165C:p.Y55Y,ENSG00000117519:ENST00000538964:exon5:c.T288C:p.Y96Y	Score=643;Name=lod=546	NA	1p21.3	NA	NA	NA	NA	rs2228344	0.05	0.05	0.051	0.0591054	0.0487	NA	0.0447	0.1104	0.0716	0.05	NA	0.05	0.11	0.0504	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.006648	NA	NA	0.044302	0.103495	NA	0.022	NA	6.5232646
1000	12	547683	547683	T	C	exonic	CCDC77	NA	nonsynonymous SNV	CCDC77:NM_001130148:exon8:c.T908C:p.M303T,CCDC77:NM_001130146:exon9:c.T908C:p.M303T,CCDC77:NM_001130147:exon9:c.T908C:p.M303T,CCDC77:NM_032358:exon10:c.T1004C:p.M335T	exonic	ENSG00000120647	NA	nonsynonymous SNV	ENSG00000120647:ENST00000540180:exon8:c.T908C:p.M303T,ENSG00000120647:ENST00000412006:exon9:c.T908C:p.M303T,ENSG00000120647:ENST00000422000:exon9:c.T908C:p.M303T,ENSG00000120647:ENST00000543504:exon9:c.T908C:p.M303T,ENSG00000120647:ENST00000239830:exon10:c.T1004C:p.M335T	NA	NA	12p13.33	NA	NA	NA	NA	rs735295	0.3	0.3	0.283	0.322883	0.2594	0.3433	0.4107	0.2943	0.3436	0.24	0.37	0.36	0.27	0.2883	0.37	0.57	T	0.002	B	0.004	B	0.241	N	1.000	P	0.69	N	1.11	T	-0.973	T	0.000	T	0.063	-0.63	1.21	-0.73	0.008	-0.569	1.844	-0.629996	NA	0.6	0.263023	0.289378	NA	0.261	NA	6.5226104
1000	17	39620399	39620399	C	T	exonic	KRT32	NA	synonymous SNV	KRT32:NM_002278:exon5:c.G927A:p.Q309Q	exonic	ENSG00000108759	NA	synonymous SNV	ENSG00000108759:ENST00000225899:exon5:c.G927A:p.Q309Q	Score=444;Name=lod=85	NA	17q21.2	Score=692;Name=V$BRACH_01	NA	NA	NA	rs12948056	0.34	0.34	0.341	0.304113	0.4215	0.3145	0.3818	0.2095	0.2454	0.42	0.35	0.33	0.22	0.3532	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.833092	NA	NA	0.369651	0.212211	ID=COSM1563840;OCCURENCE=1(large_intestine)	0.326	NA	6.5223156
1000	1	212798977	212798977	A	G	exonic	FAM71A	NA	nonsynonymous SNV	FAM71A:NM_153606:exon1:c.A758G:p.N253S	exonic	ENSG00000162771	NA	nonsynonymous SNV	ENSG00000162771:ENST00000294829:exon1:c.A758G:p.N253S	NA	NA	1q32.3	NA	NA	NA	NA	rs3122712	0.26	0.26	0.253	0.252995	0.2634	0.0804	0.196	0.4554	0.1871	0.26	0.1	0.24	0.46	0.2566	0.46	0.75	T	0.001	B	0.0	B	.	.	1.000	P	0.14	N	3.99	T	-0.968	T	0.000	T	0.028	0.074	4.402	-0.822	-0.271	-0.003	1.768	0.074306	NA	0.87	0.291744	0.435315	NA	0.333	NA	6.5215894
1000	9	69238176	69238176	C	T	intronic	CBWD6	NA	NA	NA	intronic	ENSG00000204790	NA	NA	NA	NA	NA	9q21.11	NA	NA	NA	NA	rs71224225	NA	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4786	NA	0.07	T	.	.	.	.	.	.	1.000	N	.	.	.	.	-0.999	T	0.080	T	0.021	-0.984	0.285	-3.22	-1.548	-0.033	3.537	-0.984092	NA	0.01	NA	NA	NA	NA	NA	6.5214
1000	17	71398170	71398170	G	C	exonic	SDK2	NA	synonymous SNV	SDK2:NM_001144952:exon19:c.C2595G:p.T865T	exonic	ENSG00000069188	NA	synonymous SNV	ENSG00000069188:ENST00000424778:exon2:c.C123G:p.T41T,ENSG00000069188:ENST00000388726:exon19:c.C2595G:p.T865T,ENSG00000069188:ENST00000392650:exon19:c.C2595G:p.T865T	NA	NA	17q25.1	NA	Name=GABP	Name=35	NA	rs9302962	0.38	0.38	0.392	0.381989	0.3817	0.2133	0.2622	0.6793	0.2393	0.38	0.23	0.27	0.65	0.3694	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.008411	NA	NA	0.394302	0.638448	ID=COSM437275;OCCURENCE=1(breast)	0.384	NA	6.5212646
1000	19	58927215	58927215	C	T	intronic	ZNF584	NA	NA	NA	exonic	ENSG00000171574	NA	nonsynonymous SNV	ENSG00000171574:ENST00000322834:exon4:c.C298T:p.R100C	NA	NA	19q13.43	NA	NA	NA	NA	rs12986387	0.16	0.16	0.158	0.15016	0.2485	0.0546	0.1772	0.118	0.1718	0.23	0.06	0.19	0.15	0.1895	0.23	0.13	T	0.0	B	0.0	B	.	.	1.000	P	.	.	5.21	T	-0.906	T	0.000	T	0.072	0.89	8.616	2.03	0.227	-0.221	1.94	0.890219	NA	0	0.207685	0.113014	NA	0.181	NA	6.5209817
1000	14	74727367	74727367	G	A	exonic	VSX2	NA	synonymous SNV	VSX2:NM_182894:exon5:c.G831A:p.L277L	exonic	ENSG00000119614	NA	synonymous SNV	ENSG00000119614:ENST00000261980:exon5:c.G831A:p.L277L	Score=538;Name=lod=205	NA	14q24.3	NA	NA	NA	NA	rs62006815	0.02	0.02	0.018	0.0195687	0.0447	NA	0.0202	0.0023	0.0368	0.05	NA	0.03	0.0041	0.0552	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.238564	1.238564	NA	0.045973	0.00798	NA	0.014	NA	6.5207936
1000	9	123886277	123886277	A	G	exonic	CNTRL	NA	synonymous SNV	CNTRL:NM_007018:exon11:c.A1719G:p.Q573Q	exonic	ENSG00000119397	NA	synonymous SNV	ENSG00000119397:ENST00000373847:exon2:c.A63G:p.Q21Q,ENSG00000119397:ENST00000373850:exon2:c.A63G:p.Q21Q,ENSG00000119397:ENST00000238341:exon11:c.A1719G:p.Q573Q,ENSG00000119397:ENST00000373855:exon13:c.A1719G:p.Q573Q	Score=625;Name=lod=464	NA	9q33.2	NA	NA	NA	NA	rs62578445	0.02	0.02	0.015	0.019369	0.0567	NA	0.0245	0.0023	0.0204	0.05	NA	0.03	0.01	0.0402	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.264483	1.264483	NA	0.049535	0.008398	NA	0.051	NA	6.5202316
1000	2	220046975	220046975	C	A	exonic	FAM134A	NA	nonsynonymous SNV	FAM134A:NM_024293:exon9:c.C1256A:p.P419Q	exonic	ENSG00000144567	NA	nonsynonymous SNV	ENSG00000144567:ENST00000430297:exon9:c.C1256A:p.P419Q	NA	NA	2q35	Score=960;Name=V$MZF1_01	NA	NA	NA	rs3731900	0.43	0.43	0.39	0.407548	0.6372	0.2361	0.402	0.2443	0.5726	0.65	0.26	0.45	0.27	0.5511	0.65	.	.	0.001	B	0.001	B	0.563	N	1.000	P	-0.345	N	1.57	T	-0.947	T	0.000	T	0.206	0.111	4.596	-0.369	0.024	-0.071	2.388	0.110771	NA	0.41	0.625814	0.298457	NA	0.5	NA	6.5192194
1000	2	160084473	160084473	A	C	exonic	TANC1	NA	synonymous SNV	TANC1:NM_001145909:exon25:c.A4023C:p.T1341T,TANC1:NM_033394:exon25:c.A4047C:p.T1349T	exonic	ENSG00000115183	NA	synonymous SNV	ENSG00000115183:ENST00000454300:exon23:c.A3729C:p.T1243T,ENSG00000115183:ENST00000263635:exon25:c.A4047C:p.T1349T	Score=514;Name=lod=163	NA	2q24.2	Score=838;Name=V$FOXO4_02	NA	NA	NA	rs2288110	0.47	0.47	0.438	0.478834	0.3718	0.6151	0.6009	0.351	0.5348	0.37	0.62	0.54	0.38	0.4265	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.29353	1.29353	NA	0.349383	0.356289	NA	0.391	NA	6.5189836
1000	2	1664654	1664654	A	G	exonic	PXDN	NA	synonymous SNV	PXDN:NM_012293:exon14:c.T1836C:p.N612N	exonic	ENSG00000130508	NA	synonymous SNV	ENSG00000130508:ENST00000252804:exon14:c.T1836C:p.N612N	NA	NA	2p25.3	NA	NA	NA	NA	rs17841813	0.8	0.8	0.774	0.810903	0.6918	0.9752	0.8242	0.7277	0.8671	0.7	0.98	0.81	0.75	0.756	0.98	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.028	T	0.000	T	.	-0.953	0.337	-4.16	-1.006	-0.058	10.927	-0.952668	NA	NA	0.700143	0.740297	NA	0.746	NA	6.5187236
1000	1	21952884	21952884	G	A	exonic	RAP1GAP	NA	synonymous SNV	RAP1GAP:NM_001145658:exon3:c.C87T:p.S29S	exonic	ENSG00000076864	NA	synonymous SNV	ENSG00000076864:ENST00000290101:exon3:c.C87T:p.S29S,ENSG00000076864:ENST00000359708:exon3:c.C87T:p.S29S	Score=475;Name=lod=114	NA	1p36.12	NA	NA	NA	NA	rs1130564	0.04	0.04	0.037	0.0315495	0.0517	NA	0.0331	0.0507	0.0164	0.06	NA	0.04	0.07	0.0425	0.076	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.38655	1.38655	NA	0.053881	0.03986	NA	0.08	NA	6.5185856
1000	3	196771554	196771554	T	C	exonic	DLG1	NA	synonymous SNV	DLG1:NM_001204388:exon21:c.A2307G:p.K769K,DLG1:NM_001204387:exon22:c.A2343G:p.K781K,DLG1:NM_001204386:exon25:c.A2619G:p.K873K,DLG1:NM_001098424:exon26:c.A2655G:p.K885K,DLG1:NM_004087:exon26:c.A2721G:p.K907K	exonic	ENSG00000075711	NA	synonymous SNV	ENSG00000075711:ENST00000452595:exon21:c.A2307G:p.K769K,ENSG00000075711:ENST00000443183:exon22:c.A2343G:p.K781K,ENSG00000075711:ENST00000422288:exon23:c.A2502G:p.K834K,ENSG00000075711:ENST00000314062:exon24:c.A2502G:p.K834K,ENSG00000075711:ENST00000450955:exon24:c.A2622G:p.K874K,ENSG00000075711:ENST00000357674:exon25:c.A2622G:p.K874K,ENSG00000075711:ENST00000392382:exon25:c.A2556G:p.K852K,ENSG00000075711:ENST00000346964:exon26:c.A2721G:p.K907K,ENSG00000075711:ENST00000419354:exon26:c.A2655G:p.K885K,ENSG00000075711:ENST00000448528:exon26:c.A2655G:p.K885K	Score=634;Name=lod=502	NA	3q29	NA	NA	NA	NA	rs35370245	0.03	0.03	0.02	0.0253594	0.0577	0.001	0.0303	0.003	0.044	0.06	NA	0.04	0.0041	0.0435	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.157205	NA	NA	0.046977	0.012937	NA	NA	NA	6.5184896
1000	4	69512847	69512847	T	G	exonic	UGT2B15	NA	nonsynonymous SNV	UGT2B15:NM_001076:exon6:c.A1568C:p.K523T	exonic	ENSG00000196620	NA	nonsynonymous SNV	ENSG00000196620:ENST00000338206:exon6:c.A1568C:p.K523T	NA	NA	4q13.2	NA	NA	NA	NA	rs4148269	0.33	0.33	0.29	0.367612	0.6362	0.1895	0.5029	0.1263	0.5051	0.55	0.15	0.46	0.1	0.5459	0.63	0.47	T	0.0	B	0.0	B	0.420	N	1.000	P	0.16	N	0.16	T	-0.927	T	0.000	T	0.059	-0.904	0.429	-0.317	-0.289	-2.153	5.494	-0.904425	NA	0.48	0.632829	0.224467	NA	0.457	NA	6.5184044
1000	11	18291312	18291312	C	T	exonic	SAA1	NA	synonymous SNV	SAA1:NM_000331:exon4:c.C279T:p.D93D,SAA1:NM_199161:exon4:c.C279T:p.D93D,SAA1:NM_001178006:exon5:c.C279T:p.D93D	exonic	ENSG00000173432	NA	synonymous SNV	ENSG00000173432:ENST00000356524:exon4:c.C279T:p.D93D,ENSG00000173432:ENST00000405158:exon4:c.C279T:p.D93D,ENSG00000173432:ENST00000532858:exon5:c.C279T:p.D93D	Score=235;Name=lod=12	NA	11p15.1	NA	NA	NA	NA	rs15790	0.02	0.02	0.016	0.0159744	0.0497	NA	0.0173	0.0023	0.0153	0.05	NA	0.02	NA	0.0401	0.059	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.167438	NA	NA	0.058467	0.013188	NA	0.007	NA	6.5183996
1000	9	15203775	15203775	G	A	intronic	TTC39B	NA	NA	NA	intronic	ENSG00000155158	NA	NA	NA	Score=329;Name=lod=29	NA	9p22.3	Score=884;Name=V$NF1_Q6	NA	Name=3	NA	rs11789697	0.08	0.08	0.082	0.0700879	0.168	0.0268	0.1037	0.0091	0.0726	0.16	0.02	0.1	0.01	0.1327	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.793717	NA	NA	0.181047	0.039265	NA	0.101	NA	6.518253
1000	1	1987993	1987993	T	C	exonic	PRKCZ	NA	synonymous SNV	PRKCZ:NM_002744:exon3:c.T264C:p.D88D	exonic	ENSG00000067606	NA	synonymous SNV	ENSG00000067606:ENST00000378567:exon3:c.T264C:p.D88D,ENSG00000067606:ENST00000503297:exon3:c.T126C:p.D42D	Score=343;Name=lod=33	NA	1p36.33	Score=799;Name=V$ARP1_01	NA	NA	NA	rs12184	0.63	0.63	0.655	0.669928	0.3429	0.9454	0.402	0.8873	0.6186	0.33	0.95	0.4	0.89	0.4623	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.800623	NA	NA	0.343605	0.81911	NA	0.601	NA	6.5178616
1000	4	141563747	141563747	A	G	ncRNA_exonic	TNRC18P1	NA	NA	NA	ncRNA_exonic	ENSG00000249661	NA	NA	NA	Score=309;Name=lod=24	NA	4q31.21	NA	NA	Name=4	NA	rs12642653	0.11	0.11	0.097	0.115615	0.1491	0.1885	0.0576	0.0038	0.1984	0.16	0.18	0.08	0.0041	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.037159	NA	NA	NA	NA	NA	0.051	NA	6.5175666
1000	1	109265029	109265029	G	T	exonic	FNDC7	NA	nonsynonymous SNV	FNDC7:NM_001144937:exon5:c.G671T:p.R224L	exonic	ENSG00000143107	NA	nonsynonymous SNV	ENSG00000143107:ENST00000271311:exon4:c.G674T:p.R225L,ENSG00000143107:ENST00000370017:exon5:c.G671T:p.R224L	NA	NA	1p13.3	NA	Name=PU.1	NA	NA	rs4423040	0.59	0.59	0.565	0.578674	0.6044	0.8621	0.6657	0.2496	0.6431	0.61	0.84	0.64	0.23	0.6062	0.84	0.2	T	0.0	B	0.0	B	0.267	N	1.000	P	0	N	0.66	T	-1.026	T	0.021	T	0.061	0.376	6.042	0.32	-0.389	0.273	5.604	0.376039	NA	0.29	0.605814	0.310486	NA	0.391	NA	6.5169194
1000	9	134385436	134385436	A	G	exonic	POMT1	NA	nonsynonymous SNV	POMT1:NM_007171:exon8:c.A752G:p.Q251R	exonic	ENSG00000130714	NA	nonsynonymous SNV	ENSG00000130714:ENST00000441334:exon6:c.A401G:p.Q134R,ENSG00000130714:ENST00000448212:exon7:c.A590G:p.Q197R,ENSG00000130714:ENST00000372228:exon8:c.A752G:p.Q251R	NA	NA	9q34.13	NA	NA	NA	NA	rs2296949	0.87	0.87	0.864	0.870607	0.9423	0.9246	0.8343	0.7171	0.9744	0.94	0.92	0.86	0.7	0.923	0.95	.	.	0.0	B	0.0	B	0.001	N	1.000	P	0.55	N	-1.02	T	-0.924	T	0.000	T	0.246	-1.124	0.123	1.25	0.060	1.328	3.501	-1.123557	NA	0.52	0.951512	0.738311	NA	0.833	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000081493.1;CLNDSDB=.;CLNDSDBID=.	6.5165214
1000	16	81301571	81301571	A	G	exonic	BCMO1	NA	synonymous SNV	BCMO1:NM_017429:exon6:c.A678G:p.P226P	exonic	ENSG00000135697	NA	synonymous SNV	ENSG00000135697:ENST00000425577:exon5:c.A471G:p.P157P,ENSG00000135697:ENST00000258168:exon6:c.A678G:p.P226P	Score=432;Name=lod=76	NA	16q23.2	NA	NA	NA	NA	rs7202895	0.12	0.12	0.128	0.141973	0.0447	0.0099	0.062	0.4312	0.044	0.04	0.01	0.08	0.42	0.0661	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.068114	NA	NA	0.040116	0.35218	NA	0.167	NA	6.5157506
1001	5	53815066	53815066	C	A	exonic	SNX18	NA	synonymous SNV	SNX18:NM_001102575:exon1:c.C1284A:p.I428I,SNX18:NM_001145427:exon1:c.C1284A:p.I428I,SNX18:NM_052870:exon1:c.C1284A:p.I428I	exonic	ENSG00000178996	NA	synonymous SNV	ENSG00000178996:ENST00000326277:exon1:c.C1284A:p.I428I,ENSG00000178996:ENST00000343017:exon1:c.C1284A:p.I428I,ENSG00000178996:ENST00000381410:exon1:c.C1284A:p.I428I	Score=647;Name=lod=570	NA	5q11.2	Score=879;Name=V$CDPCR1_01	NA	NA	NA	rs2548613	0.36	0.36	0.364	0.347444	0.4056	0.2897	0.3674	0.3979	0.2648	0.42	0.28	0.36	0.38	0.3709	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.601269	NA	NA	0.375233	0.42079	NA	0.283	NA	6.5149336
1001	5	118506807	118506807	A	G	exonic	DMXL1	NA	synonymous SNV	DMXL1:NM_005509:exon24:c.A6321G:p.T2107T	exonic	ENSG00000172869	NA	synonymous SNV	ENSG00000172869:ENST00000311085:exon24:c.A6321G:p.T2107T,ENSG00000172869:ENST00000539542:exon24:c.A6321G:p.T2107T	NA	NA	5q23.1	Score=952;Name=V$CEBP_01	NA	NA	NA	rs76475084	0.03	0.03	0.018	0.0363419	0.0517	0.003	0.0331	0.0106	0.092	0.05	NA	0.04	0.01	0.049	0.052	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.028413	NA	NA	0.05186	0.01317	NA	0.007	NA	6.5141066
1001	7	23235483	23235483	A	G	exonic	NUPL2	NA	synonymous SNV	NUPL2:NM_007342:exon4:c.A471G:p.E157E	exonic	ENSG00000136243	NA	synonymous SNV	ENSG00000136243:ENST00000258742:exon4:c.A471G:p.E157E,ENSG00000136243:ENST00000413919:exon4:c.A471G:p.E157E,ENSG00000136243:ENST00000438012:exon4:c.A471G:p.E157E	Score=607;Name=lod=389	NA	7p15.3	NA	NA	NA	NA	rs1728327	0.06	0.06	0.051	0.0782748	0.0467	0.0129	0.0793	0.1362	0.0992	0.05	0.01	0.07	0.12	0.0621	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.956075	NA	NA	0.043953	0.122106	NA	0.058	NA	6.5139136
1001	2	113940839	113940839	G	C	exonic	PSD4	NA	nonsynonymous SNV	PSD4:NM_012455:exon2:c.G806C:p.G269A	exonic	ENSG00000125637	NA	nonsynonymous SNV	ENSG00000125637:ENST00000245796:exon2:c.G806C:p.G269A,ENSG00000125637:ENST00000441564:exon2:c.G806C:p.G269A	NA	NA	2q13	NA	NA	NA	NA	rs4849167	0.54	0.54	0.518	0.516973	0.4423	0.6012	0.5	0.5272	0.5051	0.46	0.62	0.51	0.58	0.4705	0.62	.	.	0.753	P	0.241	B	0.099	N	0.841	P	0.805	L	2.76	T	-1.014	T	0.000	T	0.09	2.845	15.48	0.861	-0.120	-0.260	5.162	2.844789	2.844789	0.12	0.407791	0.504539	NA	0.565	NA	6.5127424
1001	14	20872863	20872863	A	G	exonic	TEP1	NA	synonymous SNV	TEP1:NM_007110:exon5:c.T939C:p.A313A	exonic	ENSG00000129566	NA	synonymous SNV	ENSG00000129566:ENST00000262715:exon5:c.T939C:p.A313A,ENSG00000129566:ENST00000555727:exon5:c.T939C:p.A313A	Score=493;Name=lod=134	NA	14q11.2	NA	NA	NA	NA	rs6413437	0.08	0.08	0.106	0.103634	0.0447	NA	0.0461	0.2844	0.0675	0.05	NA	0.05	0.26	0.0647	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.19605	NA	NA	0.044767	0.244212	NA	0.058	NA	6.5124996
1001	20	60738566	60738566	C	T	exonic	SS18L1	NA	synonymous SNV	SS18L1:NM_198935:exon6:c.C609T:p.G203G	exonic	ENSG00000184402	NA	synonymous SNV	ENSG00000184402:ENST00000370848:exon5:c.C618T:p.G206G,ENSG00000184402:ENST00000331758:exon6:c.C609T:p.G203G,ENSG00000184402:ENST00000421564:exon6:c.C609T:p.G203G	Score=512;Name=lod=160	NA	20q13.33	NA	NA	NA	NA	rs73309164	0.05	0.05	0.055	0.0682907	0.0507	0.001	0.0432	0.1543	0.0573	0.04	NA	0.02	0.13	0.0523	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.434553	NA	NA	0.051572	0.149705	ID=COSM444155;OCCURENCE=1(breast)	0.087	NA	6.5120946
1001	5	56233490	56233490	G	A	exonic	MIER3	NA	synonymous SNV	MIER3:NM_152622:exon5:c.C351T:p.D117D	exonic	ENSG00000155545	NA	synonymous SNV	ENSG00000155545:ENST00000409421:exon3:c.C162T:p.D54D,ENSG00000155545:ENST00000336942:exon5:c.C270T:p.D90D,ENSG00000155545:ENST00000381199:exon5:c.C351T:p.D117D,ENSG00000155545:ENST00000381213:exon5:c.C351T:p.D117D,ENSG00000155545:ENST00000381226:exon5:c.C366T:p.D122D	Score=563;Name=lod=259	NA	5q11.2	NA	NA	NA	NA	rs35386984	0.03	0.03	0.022	0.0183706	0.0567	NA	0.0274	0.0045	0.0102	0.06	NA	0.03	0.0041	0.0407	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.23095	NA	NA	0.057209	0.009986	NA	0.029	NA	6.5120576
1001	11	7817538	7817538	T	C	exonic	OR5P2	NA	nonsynonymous SNV	OR5P2:NM_153444:exon1:c.A952G:p.N318D	exonic	ENSG00000183303	NA	nonsynonymous SNV	ENSG00000183303:ENST00000329434:exon1:c.A952G:p.N318D	NA	NA	11p15.4	NA	NA	NA	NA	rs7949771	0.27	0.27	0.264	0.236621	0.2763	0.128	0.2911	0.3472	0.1196	0.29	0.15	0.28	0.37	0.2633	0.37	0.28	T	0.072	B	0.01	B	0.968	N	1.000	P	0	N	8.86	T	-1.214	T	0.000	T	0.015	-0.682	1.029	-0.787	0.072	.	6.108	-0.682344	NA	0.62	0.28192	0.323055	NA	0.246	NA	6.5118134
1001	3	125872293	125872293	G	A	exonic	ALDH1L1	NA	synonymous SNV	ALDH1L1:NM_001270365:exon5:c.C549T:p.D183D,ALDH1L1:NM_001270364:exon7:c.C882T:p.D294D,ALDH1L1:NM_012190:exon7:c.C852T:p.D284D	exonic	ENSG00000144908	NA	synonymous SNV	ENSG00000144908:ENST00000452905:exon5:c.C549T:p.D183D,ENSG00000144908:ENST00000455064:exon6:c.C327T:p.D109D,ENSG00000144908:ENST00000273450:exon7:c.C882T:p.D294D,ENSG00000144908:ENST00000393431:exon7:c.C852T:p.D284D,ENSG00000144908:ENST00000393434:exon7:c.C852T:p.D284D,ENSG00000144908:ENST00000472186:exon7:c.C852T:p.D284D	Score=492;Name=lod=133	NA	3q21.3	NA	NA	NA	NA	rs16837178	0.06	0.06	0.054	0.0569089	0.0437	NA	0.062	0.1324	0.0235	0.04	NA	0.07	0.13	0.0541	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.031631	NA	NA	0.057093	0.124149	NA	0.058	NA	6.5117736
1001	12	54675113	54675113	G	A	ncRNA_intronic	HNRNPA1P10	NA	NA	NA	ncRNA_intronic	ENSG00000258344	NA	NA	NA	NA	NA	12q13.13	NA	Name=Pol2-4H8,Sin3Ak-20,HEY1,c-Myc,USF-1,E2F6_(H-50),TAF7_(SQ-8),YY1_(C-20),Pol2,Max,CEBPB	Name=100	NA	rs2071391	0.24	0.24	0.241	0.227236	0.1551	0.3988	0.2363	0.1248	0.2566	0.15	0.47	0.22	0.14	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.23278	NA	NA	NA	NA	NA	0.167	NA	6.5115666
1001	16	75646685	75646685	G	T	exonic	ADAT1	NA	nonsynonymous SNV	ADAT1:NM_012091:exon7:c.C499A:p.H167N	exonic	ENSG00000065457	NA	nonsynonymous SNV	ENSG00000065457:ENST00000307921:exon7:c.C499A:p.H167N	NA	NA	16q23.1	NA	NA	NA	NA	rs3743598	0.53	0.53	0.525	0.570487	0.2396	0.8165	0.4957	0.7194	0.5092	0.23	0.82	0.47	0.68	0.3692	0.82	0.54	T	0.0	B	0.002	B	0.136	N	1.000	P	-1.575	N	2.56	T	-0.984	T	0.000	T	0.024	-0.761	0.784	1.81	-0.133	-0.091	6.838	-0.761258	NA	0.7	0.214419	0.658098	NA	0.413	NA	6.5101144
1001	20	3686436	3686436	C	T	exonic	SIGLEC1	NA	nonsynonymous SNV	SIGLEC1:NM_023068:exon3:c.G661A:p.V221M	exonic	ENSG00000088827	NA	nonsynonymous SNV	ENSG00000088827:ENST00000202578:exon3:c.G661A:p.V221M,ENSG00000088827:ENST00000344754:exon3:c.G661A:p.V221M	NA	NA	20p13	NA	NA	NA	NA	rs6037651	0.66	0.66	0.654	0.690895	0.5726	0.747	0.5865	0.7375	0.7658	0.58	0.72	0.55	0.78	0.657	0.78	0.23	T	0.196	B	0.086	B	0.222	N	1.000	P	0.41	N	-2.09	D	-0.967	T	0.000	T	0.053	0.883	8.586	0.33	-0.069	-0.625	4.321	0.883473	NA	0.1	0.593953	0.713345	ID=COSM1411675;OCCURENCE=1(large_intestine)	0.652	NA	6.5097804
1001	6	51524403	51524403	G	A	exonic	PKHD1	NA	synonymous SNV	PKHD1:NM_138694:exon61:c.C10521T:p.H3507H	exonic	ENSG00000170927	NA	synonymous SNV	ENSG00000170927:ENST00000371117:exon61:c.C10521T:p.H3507H	NA	NA	6p12.3	NA	NA	NA	NA	rs34460237	0.07	0.07	0.048	0.0656949	0.0517	0.1339	0.098	0.003	0.0716	0.05	0.13	0.09	0.01	0.0624	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.931905	NA	NA	0.04314	0.009986	NA	0.043	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000082515.1;CLNDSDB=.;CLNDSDBID=.	6.5094266
1001	12	51203371	51203371	C	T	exonic	ATF1	NA	synonymous SNV	ATF1:NM_005171:exon4:c.C327T:p.Y109Y	exonic	ENSG00000123268	NA	synonymous SNV	ENSG00000123268:ENST00000262053:exon4:c.C327T:p.Y109Y,ENSG00000123268:ENST00000552487:exon4:c.C327T:p.Y109Y,ENSG00000123268:ENST00000552510:exon4:c.C327T:p.Y109Y	Score=559;Name=lod=250	NA	12q13.12	NA	Name=GATA-1	NA	NA	rs1129406	0.39	0.39	0.385	0.393371	0.3877	0.2619	0.281	0.5658	0.3814	0.38	0.31	0.28	0.56	0.3655	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.721353	1.721353	NA	0.404535	0.529505	NA	0.391	NA	6.5089316
1001	7	23239133	23239133	C	T	exonic	NUPL2	NA	synonymous SNV	NUPL2:NM_007342:exon6:c.C666T:p.S222S	exonic	ENSG00000136243	NA	synonymous SNV	ENSG00000136243:ENST00000258742:exon6:c.C666T:p.S222S,ENSG00000136243:ENST00000413919:exon7:c.C741T:p.S247S	NA	NA	7p15.3	Score=746;Name=V$MYOGNF1_01	NA	NA	NA	rs858238	0.07	0.07	0.074	0.096845	0.0467	0.0129	0.0821	0.2057	0.0982	0.05	0.01	0.07	0.18	0.0672	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.180938	NA	NA	0.044186	0.179074	NA	0.094	NA	6.5085806
1001	12	7894056	7894056	G	A	exonic	CLEC4C	NA	nonsynonymous SNV	CLEC4C:NM_203503:exon3:c.C103T:p.P35S,CLEC4C:NM_130441:exon4:c.C196T:p.P66S	exonic	ENSG00000198178	NA	nonsynonymous SNV	ENSG00000198178:ENST00000360345:exon3:c.C196T:p.P66S,ENSG00000198178:ENST00000540085:exon3:c.C103T:p.P35S,ENSG00000198178:ENST00000354629:exon4:c.C103T:p.P35S,ENSG00000198178:ENST00000542353:exon4:c.C196T:p.P66S	NA	NA	12p13.31	NA	NA	NA	NA	rs73056605	0.23	0.23	0.2	0.186901	0.2962	0.1994	0.3285	0.0446	0.1534	0.29	0.23	0.34	0.05	0.2434	0.34	0.96	T	0.037	B	0.01	B	.	.	1.000	P	-1.95	N	4.49	T	-0.975	T	0.000	T	0.038	-2.239	0.005	-1.29	-0.356	-0.053	4.844	-2.238978	NA	0.8	0.285814	0.090331	ID=COSM147410;OCCURENCE=1(stomach)	0.312	NA	6.5079194
1001	6	122001581	122001581	A	C	intergenic	GJA1,HSF2	dist=230708;dist=719115	NA	NA	ncRNA_exonic	ENSG00000219135	NA	NA	NA	Score=722;Name=lod=1141	NA	6q22.31	NA	Name=Rad21	Name=4	NA	rs9490337	0.48	0.48	0.44	0.515575	0.493	0.3869	0.6196	0.4516	0.684	0.52	0.38	0.6	0.45	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.102437	NA	NA	NA	NA	NA	0.384	NA	6.507
1001	16	71807232	71807232	C	A	exonic	AP1G1	NA	synonymous SNV	AP1G1:NM_001030007:exon4:c.G360T:p.G120G,AP1G1:NM_001128:exon4:c.G360T:p.G120G	exonic	ENSG00000166747	NA	synonymous SNV	ENSG00000166747:ENST00000299980:exon4:c.G360T:p.G120G,ENSG00000166747:ENST00000393512:exon4:c.G360T:p.G120G,ENSG00000166747:ENST00000423132:exon4:c.G360T:p.G120G,ENSG00000166747:ENST00000450149:exon4:c.G360T:p.G120G,ENSG00000166747:ENST00000563259:exon4:c.G360T:p.G120G,ENSG00000166747:ENST00000565009:exon4:c.G360T:p.G120G,ENSG00000166747:ENST00000569185:exon4:c.G360T:p.G120G,ENSG00000166747:ENST00000563104:exon5:c.G360T:p.G120G,ENSG00000166747:ENST00000568327:exon5:c.G360T:p.G120G,ENSG00000166747:ENST00000433195:exon7:c.G429T:p.G143G,ENSG00000166747:ENST00000569748:exon7:c.G360T:p.G120G	Score=672;Name=lod=716	NA	16q22.2	NA	NA	NA	NA	rs113235758	0.03	0.03	0.014	0.0163738	0.0567	NA	0.0303	NA	0.0041	0.06	NA	0.03	NA	0.0413	0.062	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.231585	NA	NA	0.061744	0.011829	NA	0.014	NA	6.5069226
1001	8	27293865	27293865	C	T	exonic	PTK2B	NA	synonymous SNV	PTK2B:NM_173175:exon15:c.C1341T:p.H447H,PTK2B:NM_173176:exon15:c.C1341T:p.H447H,PTK2B:NM_004103:exon16:c.C1341T:p.H447H,PTK2B:NM_173174:exon20:c.C1341T:p.H447H	exonic	ENSG00000120899	NA	synonymous SNV	ENSG00000120899:ENST00000397497:exon7:c.C579T:p.H193H,ENSG00000120899:ENST00000517339:exon14:c.C1341T:p.H447H,ENSG00000120899:ENST00000346049:exon15:c.C1341T:p.H447H,ENSG00000120899:ENST00000420218:exon15:c.C1341T:p.H447H,ENSG00000120899:ENST00000544172:exon19:c.C1341T:p.H447H,ENSG00000120899:ENST00000338238:exon20:c.C1341T:p.H447H,ENSG00000120899:ENST00000397501:exon20:c.C1341T:p.H447H	Score=535;Name=lod=200	NA	8p21.2	NA	Name=Pol2-4H8	NA	NA	rs7005936	0.33	0.33	0.321	0.370208	0.3867	0.1954	0.3804	0.4607	0.4039	0.4	0.15	0.35	0.42	0.3782	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.494136	1.494136	NA	0.394884	0.444621	ID=COSM1559836,COSM1559834,COSM1559835;OCCURENCE=1(central_nervous_system)	0.471	NA	6.5068826
1001	6	117686840	117686840	T	C	exonic	ROS1	NA	synonymous SNV	ROS1:NM_002944:exon19:c.A2877G:p.E959E	exonic	ENSG00000047936	NA	synonymous SNV	ENSG00000047936:ENST00000368508:exon19:c.A2877G:p.E959E,ENSG00000047936:ENST00000368507:exon20:c.A2862G:p.E954E	Score=472;Name=lod=110	NA	6q22.1	NA	NA	NA	NA	rs2229078	0.03	0.03	0.02	0.0241613	0.0577	0.001	0.0303	NA	0.0419	0.06	NA	0.02	NA	0.0484	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.810091	NA	NA	0.053953	0.010894	NA	NA	NA	6.5066136
1001	20	60737908	60737908	G	A	exonic	SS18L1	NA	synonymous SNV	SS18L1:NM_198935:exon5:c.G477A:p.S159S	exonic	ENSG00000184402	NA	synonymous SNV	ENSG00000184402:ENST00000370848:exon4:c.G486A:p.S162S,ENSG00000184402:ENST00000331758:exon5:c.G477A:p.S159S,ENSG00000184402:ENST00000421564:exon5:c.G477A:p.S159S	Score=378;Name=lod=46	NA	20q13.33	NA	NA	NA	NA	rs61744430	0.05	0.05	0.058	0.0746805	0.0537	0.003	0.049	0.1672	0.0634	0.04	NA	0.02	0.15	0.0539	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.203828	NA	NA	0.052791	0.157059	NA	0.109	NA	6.5062756
1001	17	7286266	7286266	C	T	exonic	TNK1	NA	synonymous SNV	TNK1:NM_001251902:exon2:c.C21T:p.S7S,TNK1:NM_003985:exon2:c.C21T:p.S7S	exonic	ENSG00000174292	NA	synonymous SNV	ENSG00000174292:ENST00000311668:exon2:c.C21T:p.S7S,ENSG00000174292:ENST00000576207:exon2:c.C21T:p.S7S,ENSG00000174292:ENST00000576812:exon2:c.C21T:p.S7S,ENSG00000174292:ENST00000570896:exon3:c.C21T:p.S7S	Score=546;Name=lod=220	NA	17p13.1	Score=721;Name=V$SEF1_C	NA	NA	NA	rs1554947	0.35	0.35	0.319	0.273962	0.4056	0.4593	0.3934	0.0356	0.1851	0.42	0.51	0.38	0.05	0.3601	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.713234	NA	NA	0.394884	0.09398	NA	0.29	NA	6.5060826
1001	17	4804902	4804902	G	A	exonic	CHRNE	NA	synonymous SNV	CHRNE:NM_000080:exon6:c.C519T:p.A173A	exonic	ENSG00000108556	NA	synonymous SNV	ENSG00000108556:ENST00000293780:exon6:c.C519T:p.A173A	NA	NA	17p13.2	NA	NA	NA	NA	rs33970119	0.03	0.03	0.032	0.0199681	0.0616	0.001	0.0461	0.0008	0.0041	0.05	NA	0.06	0.0041	0.037	0.062	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.358502	NA	NA	0.062209	0.01044	NA	0.029	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116740.2;CLNDSDB=.;CLNDSDBID=.	6.5058576
1001	10	27692205	27692205	G	A	exonic	PTCHD3	NA	synonymous SNV	PTCHD3:NM_001034842:exon3:c.C1293T:p.G431G	exonic	ENSG00000182077	NA	synonymous SNV	ENSG00000182077:ENST00000438700:exon3:c.C1293T:p.G431G	Score=423;Name=lod=70	NA	10p12.1	NA	NA	NA	NA	rs11015742	0.13	0.13	0.131	0.121206	0.0437	0.371	0.1037	0.0219	0.09	0.05	0.36	0.09	0.03	0.0791	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.939729	NA	NA	0.038256	0.024739	NA	0.051	NA	6.5056106
1001	22	20126741	20126741	G	T	exonic	ZDHHC8	NA	synonymous SNV	ZDHHC8:NM_001185024:exon2:c.G129T:p.V43V,ZDHHC8:NM_013373:exon2:c.G129T:p.V43V	exonic	ENSG00000099904	NA	synonymous SNV	ENSG00000099904:ENST00000320602:exon2:c.G129T:p.V43V,ENSG00000099904:ENST00000334554:exon2:c.G129T:p.V43V,ENSG00000099904:ENST00000405930:exon2:c.G129T:p.V43V,ENSG00000099904:ENST00000436518:exon2:c.G96T:p.V32V	Score=401;Name=lod=57	NA	22q11.21	NA	NA	NA	NA	rs61737216	0.04	0.04	0.049	0.0501198	0.0527	0.0813	0.0101	0.0045	0.1053	0.06	0.07	0.01	0.0041	0.0542	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.26184	1.26184	NA	0.054186	0.011802	NA	0.043	NA	6.5055806
1001	1	65147002	65147002	C	T	exonic	CACHD1	NA	synonymous SNV	CACHD1:NM_020925:exon25:c.C3315T:p.H1105H	exonic	ENSG00000158966	NA	synonymous SNV	ENSG00000158966:ENST00000290039:exon25:c.C3315T:p.H1105H,ENSG00000158966:ENST00000371073:exon25:c.C3468T:p.H1156H	Score=671;Name=lod=713	NA	1p31.3	NA	NA	NA	NA	rs3828064	0.11	0.11	0.104	0.127596	0.0457	0.1935	0.0879	0.1815	0.0992	0.04	0.16	0.1	0.17	0.0696	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.868531	NA	NA	0.046047	0.16364	NA	0.203	NA	6.5053196
1002	6	30227583	30227583	C	G	ncRNA_intronic	HCG17,HLA-L	NA	NA	NA	ncRNA_exonic	ENSG00000243753	NA	NA	NA	NA	NA	6p22.1	NA	Name=CTCF,ZNF263	Name=35	NA	rs9391807	0.22	0.22	0.154	0.232628	0.163	0.4435	0.3156	0.0129	0.3252	0.16	0.42	0.27	0.02	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.671653	NA	NA	NA	NA	NA	0.261	NA	6.5036666
1002	7	47876567	47876567	G	A	exonic	PKD1L1	NA	synonymous SNV	PKD1L1:NM_138295:exon37:c.C5895T:p.C1965C	exonic	ENSG00000158683	NA	synonymous SNV	ENSG00000158683:ENST00000289672:exon37:c.C5895T:p.C1965C	NA	NA	7p12.3	Score=738;Name=V$PPARA_01	NA	NA	NA	rs17131842	0.03	0.03	0.024	0.0169728	0.0527	0.002	0.036	0.0023	0.002	0.05	0.0035	0.05	0.002	0.0472	0.063	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.719091	NA	NA	0.063256	0.011348	NA	0.007	NA	6.5035106
1002	17	75085230	75085230	C	G	ncRNA_intronic	LINC00338	NA	NA	NA	ncRNA_intronic	ENSG00000234912	NA	NA	NA	NA	NA	17q25.2	NA	Name=ERalpha_a,Pol2	Name=25	NA	rs9900566	NA	NA	NA	0.0782748	0.164	0.006	0.0994	0.0098	0.1421	NA	NA	NA	NA	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.363919	NA	NA	NA	NA	NA	0.138	NA	6.5026666
1002	2	121106850	121106850	C	T	exonic	INHBB	NA	synonymous SNV	INHBB:NM_002193:exon2:c.C624T:p.H208H	exonic	ENSG00000163083	NA	synonymous SNV	ENSG00000163083:ENST00000295228:exon2:c.C624T:p.H208H	NA	NA	2q14.2	Score=845;Name=V$ER_Q6	NA	NA	NA	rs4328642	0.14	0.14	0.114	0.137181	0.0467	0.4127	0.1744	0.0371	0.0552	0.05	0.39	0.12	0.02	0.0832	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.357649	NA	NA	0.035465	0.046981	NA	0.08	NA	6.5013016
1002	22	32506104	32506104	G	A	exonic	SLC5A1	NA	synonymous SNV	SLC5A1:NM_001256314:exon14:c.G1518A:p.T506T,SLC5A1:NM_000343:exon15:c.G1899A:p.T633T	exonic	ENSG00000100170	NA	synonymous SNV	ENSG00000100170:ENST00000543737:exon14:c.G1518A:p.T506T,ENSG00000100170:ENST00000266088:exon15:c.G1899A:p.T633T	Score=528;Name=lod=186	NA	22q12.3	NA	NA	NA	NA	rs33943816	0.03	0.03	0.02	0.0333466	0.0577	0.0198	0.0418	0.0061	0.0532	0.05	0.02	0.06	0.01	0.0454	0.062	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.972645	NA	NA	0.062326	0.012029	NA	0.029	NA	6.5012406
1002	2	167144995	167144995	T	C	exonic	SCN9A	NA	synonymous SNV	SCN9A:NM_002977:exon10:c.A1266G:p.E422E	exonic	ENSG00000169432	NA	synonymous SNV	ENSG00000169432:ENST00000452182:exon7:c.A861G:p.E287E,ENSG00000169432:ENST00000454569:exon7:c.A861G:p.E287E,ENSG00000169432:ENST00000409435:exon9:c.A1266G:p.E422E,ENSG00000169432:ENST00000303354:exon10:c.A1269G:p.E423E,ENSG00000169432:ENST00000375387:exon10:c.A1269G:p.E423E,ENSG00000169432:ENST00000409672:exon10:c.A1266G:p.E422E	Score=513;Name=lod=162	NA	2q24.3	NA	NA	NA	NA	rs13402180	0.34	0.34	0.319	0.354433	0.4036	0.3065	0.3242	0.357	0.3712	0.41	0.24	0.36	0.34	0.373	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.876987	NA	NA	0.388862	0.381457	NA	0.507	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118292.2;CLNDSDB=.;CLNDSDBID=.	6.5012046
1002	2	167145142	167145142	A	G	exonic	SCN9A	NA	synonymous SNV	SCN9A:NM_002977:exon10:c.T1119C:p.A373A	exonic	ENSG00000169432	NA	synonymous SNV	ENSG00000169432:ENST00000452182:exon7:c.T714C:p.A238A,ENSG00000169432:ENST00000454569:exon7:c.T714C:p.A238A,ENSG00000169432:ENST00000409435:exon9:c.T1119C:p.A373A,ENSG00000169432:ENST00000303354:exon10:c.T1122C:p.A374A,ENSG00000169432:ENST00000375387:exon10:c.T1122C:p.A374A,ENSG00000169432:ENST00000409672:exon10:c.T1119C:p.A373A	Score=576;Name=lod=293	NA	2q24.3	NA	NA	NA	NA	rs13414203	0.34	0.34	0.321	0.354433	0.4036	0.3065	0.3242	0.357	0.3712	0.41	0.24	0.36	0.34	0.374	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.193386	NA	NA	0.387899	0.379028	NA	0.5	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118290.2;CLNDSDB=.;CLNDSDBID=.	6.5011676
1002	2	91800347	91800347	G	A	intergenic	NONE,LOC654342	dist=NONE;dist=24362	NA	NA	ncRNA_exonic	ENSG00000233991	NA	NA	NA	Score=417;Name=lod=66	NA	2p11.1	NA	Name=SUZ12,TCF12,Ini1	Name=13	NA	rs6708765	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	NA	NA	NA	NA	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.553923	NA	NA	NA	NA	NA	0.486	NA	6.5
1002	2	133018967	133018967	A	G	intergenic	ANKRD30BL,GPR39	dist=3425;dist=155180	NA	NA	upstream	ENSG00000233786	NA	NA	NA	Score=728;Name=lod=1217	NA	2q21.2	NA	Name=FOXA2_(SC-6554),ZBTB33	Name=147	NA	rs34335623	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.463881	NA	NA	NA	NA	NA	0.435	NA	6.5
1002	2	133019016	133019016	T	G	intergenic	ANKRD30BL,GPR39	dist=3474;dist=155131	NA	NA	upstream	ENSG00000233786	NA	NA	NA	Score=728;Name=lod=1217	NA	2q21.2	NA	Name=ZBTB33,FOXA2_(SC-6554)	Name=147	NA	rs10153756	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.037838	NA	NA	NA	NA	NA	0.609	NA	6.5
1002	2	133019052	133019052	C	A	intergenic	ANKRD30BL,GPR39	dist=3510;dist=155095	NA	NA	upstream	ENSG00000233786	NA	NA	NA	Score=728;Name=lod=1217	NA	2q21.2	NA	Name=FOXA2_(SC-6554)	Name=147	NA	rs4018091	NA	NA	0.414	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.255812	NA	NA	NA	NA	NA	0.007	NA	6.5
1002	14	107282768	107282768	G	A	intergenic	LINC00221,NONE	dist=331239;dist=NONE	NA	NA	downstream	ENSG00000211979	NA	NA	NA	Score=272;Name=lod=17	NA	14q32.33	NA	NA	Name=7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.356587	NA	NA	NA	NA	NA	NA	NA	6.5
1002	17	21201719	21201719	T	C	intronic	MAP2K3	NA	NA	NA	intronic	ENSG00000034152	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs8076154	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	0.68	T	.	.	.	.	0.001	N	1.000	N	.	.	.	.	-0.955	T	0.000	T	.	0.959	8.912	-2.6	-1.093	-0.386	6.860	0.958895	NA	0.3	NA	NA	NA	0.486	NA	6.5
1002	21	11021125	11021125	C	T	UTR3	BAGE2,BAGE3,BAGE4,BAGE5	NM_182482:c.*1262G>A;NM_182481:c.*1262G>A;NM_181704:c.*1357G>A;NM_182484:c.*1357G>A	NA	NA	ncRNA_exonic	ENSG00000187172	NA	NA	NA	Score=567;Name=lod=270	NA	21p11.1	Score=884;Name=V$TGIF_01	NA	NA	NA	rs9712674	NA	NA	0.297	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.693795	NA	NA	NA	NA	NA	NA	NA	6.5
1002	21	11029616	11029616	G	T	UTR3	BAGE2,BAGE3	NM_182482:c.*1040C>A;NM_182481:c.*1040C>A	NA	NA	ncRNA_exonic	ENSG00000187172	NA	NA	NA	Score=699;Name=lod=922	NA	21p11.1	Score=758;Name=V$STAT1_01	NA	NA	NA	rs7510058	NA	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.31139	1.31139	NA	NA	NA	NA	NA	NA	6.5
1002	21	11047496	11047496	G	A	UTR3	BAGE2,BAGE3,BAGE4,BAGE5	NM_182482:c.*221C>T;NM_182481:c.*221C>T;NM_181704:c.*436C>T;NM_182484:c.*436C>T	NA	NA	ncRNA_exonic	ENSG00000187172	NA	NA	NA	Score=646;Name=lod=565	NA	21p11.1	NA	NA	Name=2	NA	rs467861	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.017928	NA	NA	NA	NA	NA	0.536	NA	6.5
1002	11	1857747	1857747	T	C	exonic	SYT8	NA	synonymous SNV	SYT8:NM_138567:exon6:c.T651C:p.R217R	exonic	ENSG00000149043	NA	synonymous SNV	ENSG00000149043:ENST00000341958:exon5:c.T609C:p.R203R,ENSG00000149043:ENST00000381968:exon6:c.T651C:p.R217R	NA	NA	11p15.5	NA	NA	NA	NA	rs3741232	0.34	0.34	0.32	0.337859	0.3936	0.3026	0.3732	0.239	0.4254	0.4	0.31	0.4	0.23	0.3906	0.4	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.929	T	0.000	T	.	1.22	9.949	-2.92	-0.731	-0.940	3.233	1.219507	NA	NA	0.382654	0.263517	NA	0.254	NA	6.4998126
1002	17	62049738	62049738	G	A	exonic	SCN4A	NA	synonymous SNV	SCN4A:NM_000334:exon2:c.C366T:p.R122R	exonic	ENSG00000007314	NA	synonymous SNV	ENSG00000007314:ENST00000435607:exon2:c.C366T:p.R122R,ENSG00000007314:ENST00000578147:exon2:c.C366T:p.R122R	NA	NA	17q23.3	NA	NA	NA	NA	rs41280108	0.03	0.03	0.024	0.0305511	0.0636	0.0268	0.0461	0.0023	0.0276	0.06	0.02	0.04	0.002	0.0479	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.055823	NA	NA	0.056247	0.011379	NA	0.014	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118270.2;CLNDSDB=.;CLNDSDBID=.	6.4989196
1002	7	91691601	91691601	C	T	exonic	AKAP9	NA	synonymous SNV	AKAP9:NM_005751:exon24:c.C5778T:p.G1926G,AKAP9:NM_147185:exon24:c.C5778T:p.G1926G	exonic	ENSG00000127914	NA	synonymous SNV	ENSG00000127914:ENST00000356239:exon24:c.C5778T:p.G1926G,ENSG00000127914:ENST00000358100:exon25:c.C5814T:p.G1938G,ENSG00000127914:ENST00000359028:exon25:c.C5814T:p.G1938G	Score=518;Name=lod=170	NA	7q21.2	Score=954;Name=V$CDPCR3HD_01	NA	NA	NA	rs10236397	0.35	0.35	0.373	0.359824	0.3857	0.1617	0.3559	0.4561	0.41	0.39	0.17	0.38	0.49	0.3795	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.611165	NA	NA	0.40314	0.475715	NA	0.406	NA	6.4983266
1002	5	32087808	32087808	G	C	exonic	PDZD2	NA	synonymous SNV	PDZD2:NM_178140:exon19:c.G4254C:p.G1418G	exonic	ENSG00000133401	NA	synonymous SNV	ENSG00000133401:ENST00000282493:exon19:c.G4254C:p.G1418G,ENSG00000133401:ENST00000438447:exon20:c.G4254C:p.G1418G	NA	NA	5p13.3	Score=748;Name=V$SEF1_C	NA	NA	NA	rs3733720	0.12	0.12	0.009	0.117612	0.0755	0.2371	0.1441	0.0439	0.1186	0.07	0.25	0.11	0.04	0.0931	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.120845	NA	NA	NA	NA	NA	0.072	NA	6.4980666
1002	22	45691594	45691594	A	G	exonic	UPK3A	NA	synonymous SNV	UPK3A:NM_001167574:exon4:c.A495G:p.Q165Q,UPK3A:NM_006953:exon6:c.A858G:p.Q286Q	exonic	ENSG00000100373	NA	synonymous SNV	ENSG00000100373:ENST00000396082:exon4:c.A495G:p.Q165Q,ENSG00000100373:ENST00000216211:exon6:c.A858G:p.Q286Q	Score=403;Name=lod=58	NA	22q13.31	Score=826;Name=V$PPARG_03	NA	NA	NA	rs1057356	0.57	0.57	0.595	0.628195	0.3598	0.6508	0.4841	0.8843	0.637	0.35	0.62	0.52	0.86	0.4621	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.051888	NA	NA	0.346744	0.799818	NA	0.558	NA	6.4980226
1002	9	68433523	68433523	T	C	ncRNA_exonic	LOC642236	NA	NA	NA	ncRNA_exonic	ENSG00000215548	NA	NA	NA	Score=603;Name=lod=375	NA	9q13	Score=878;Name=V$OCT1_06	NA	NA	NA	rs62543350	NA	NA	NA	0.334864	0.169	0.5188	0.1614	0.4274	0.3139	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.267661	NA	NA	NA	NA	NA	NA	NA	6.4976666
1002	1	11301714	11301714	A	G	exonic	MTOR	NA	synonymous SNV	MTOR:NM_004958:exon10:c.T1437C:p.D479D	exonic	ENSG00000198793	NA	synonymous SNV	ENSG00000198793:ENST00000361445:exon10:c.T1437C:p.D479D	Score=548;Name=lod=225	NA	1p36.22	Score=901;Name=V$AREB6_02	NA	NA	Score=80;Name=12204_0_-_80	rs1135172	0.66	0.66	0.619	0.639577	0.7237	0.878	0.7622	0.2239	0.7822	0.73	0.88	0.75	0.23	0.717	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.720907	NA	NA	0.728488	0.305946	NA	0.652	NA	6.4974786
1002	6	46135283	46135283	A	G	exonic	ENPP5	NA	synonymous SNV	ENPP5:NM_021572:exon2:c.T717C:p.H239H	exonic	ENSG00000112796	NA	synonymous SNV	ENSG00000112796:ENST00000230565:exon2:c.T717C:p.H239H,ENSG00000112796:ENST00000371383:exon3:c.T717C:p.H239H	Score=522;Name=lod=177	NA	6p21.1	NA	NA	NA	NA	rs34450398	0.04	0.04	0.028	0.0353435	0.0696	NA	0.0591	0.0303	0.0266	0.06	NA	0.06	0.03	0.0446	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.641592	NA	NA	0.055116	0.038811	NA	0.007	NA	6.4973506
1002	5	72419617	72419617	C	A	exonic	TMEM171	NA	nonsynonymous SNV	TMEM171:NM_001161342:exon2:c.C417A:p.N139K,TMEM171:NM_173490:exon2:c.C417A:p.N139K	exonic	ENSG00000157111	NA	nonsynonymous SNV	ENSG00000157111:ENST00000287773:exon2:c.C417A:p.N139K,ENSG00000157111:ENST00000454765:exon2:c.C417A:p.N139K	NA	NA	5q13.2	NA	NA	NA	NA	rs636926	0.42	0.42	0.424	0.448283	0.2654	0.5942	0.3285	0.5696	0.407	0.26	0.57	0.35	0.55	0.3235	0.57	0.2	T	0.02	B	0.023	B	0.107	N	1.000	P	0	N	1.98	T	-0.956	T	0.000	T	0.012	0.526	6.847	1.2	0.626	0.304	2.939	0.525579	NA	0.23	0.247442	0.529959	NA	0.377	NA	6.4969914
1002	11	61914369	61914369	C	T	exonic	INCENP	NA	synonymous SNV	INCENP:NM_020238:exon14:c.C2187T:p.A729A,INCENP:NM_001040694:exon15:c.C2199T:p.A733A	exonic	ENSG00000149503	NA	synonymous SNV	ENSG00000149503:ENST00000278849:exon14:c.C2187T:p.A729A,ENSG00000149503:ENST00000394818:exon15:c.C2199T:p.A733A	Score=329;Name=lod=29	NA	11q12.3	NA	NA	NA	NA	rs35595038	0.04	0.04	0.031	0.0421326	0.0467	0.002	0.1383	0.003	0.0634	0.04	0.0017	0.14	0.01	0.0738	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.348636	2.348636	NA	0.049467	0.012781	NA	0.036	NA	6.4966996
1002	6	56473005	56473005	T	C	ncRNA_intronic	RNU6-71P	NA	NA	NA	exonic	ENSG00000151914	NA	nonsynonymous SNV	ENSG00000151914:ENST00000439203:exon26:c.A4810G:p.I1604V,ENSG00000151914:ENST00000446842:exon26:c.A4810G:p.I1604V,ENSG00000151914:ENST00000312431:exon36:c.A5788G:p.I1930V,ENSG00000151914:ENST00000361203:exon36:c.A5788G:p.I1930V,ENSG00000151914:ENST00000370769:exon36:c.A5788G:p.I1930V,ENSG00000151914:ENST00000370754:exon39:c.A6322G:p.I2108V	NA	NA	6p12.1	NA	NA	NA	NA	rs151214572	0.0014	0.0014	0.003	0.000399361	0.002	NA	NA	NA	NA	0.004	NA	NA	NA	0.0006	0.004	1	T	0.013	B	0.03	B	0.167	N	0.999	N	.	.	0.94	T	-1.063	T	0.083	T	0.069	-2.087	0.006	0.722	0.127	0.054	7.267	-2.086987	NA	0.9	0.000739	0	NA	NA	NA	6.496661
1002	1	26627478	26627478	T	C	exonic	UBXN11	NA	synonymous SNV	UBXN11:NM_001077262:exon4:c.A138G:p.S46S,UBXN11:NM_183008:exon5:c.A138G:p.S46S	exonic	ENSG00000158062	NA	synonymous SNV	ENSG00000158062:ENST00000314675:exon4:c.A138G:p.S46S,ENSG00000158062:ENST00000374215:exon4:c.A24G:p.S8S,ENSG00000158062:ENST00000421827:exon4:c.A138G:p.S46S,ENSG00000158062:ENST00000374221:exon5:c.A138G:p.S46S,ENSG00000158062:ENST00000374222:exon5:c.A138G:p.S46S,ENSG00000158062:ENST00000423664:exon5:c.A24G:p.S8S	Score=393;Name=lod=53	NA	1p36.11	Score=761;Name=V$EVI1_01	Name=AP-2alpha,AP-2gamma	NA	NA	rs2276712	0.61	0.61	0.604	0.567292	0.7356	0.4385	0.5735	0.5885	0.4939	0.72	0.45	0.61	0.62	0.6687	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.303536	NA	NA	0.766635	0.648219	NA	0.638	NA	6.4957316
1002	3	125643847	125643847	G	A	ncRNA_exonic	FAM86JP	NA	NA	NA	ncRNA_exonic	ENSG00000171084	NA	NA	NA	NA	NA	3q21.2	Score=714;Name=V$NRSF_01	Name=ERalpha_a	NA	NA	rs13063119	0.24	0.24	0.247	0.25619	0.171	0.1062	0.1657	0.5635	0.1472	0.17	0.1	0.18	0.53	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.446968	NA	0	NA	NA	NA	0.087	NA	6.4956666
1002	19	39926643	39926643	A	G	upstream	RPS16	NA	NA	NA	upstream	ENSG00000105193,ENSG00000196235	NA	NA	NA	NA	NA	19q13.2	Score=863;Name=V$CREB_Q2	Name=SRF,PAX5-C20,STAT2,AP-2gamma,HEY1,NFKB,CCNT2,c-Myc,IRF1,TBP,GTF2B,Nrf1,TCF12,TAL1_(SC-12984),ELK4,AP-2alpha,Pol2(b),E2F1,Pol2-4H8,HA-E2F1,Sin3Ak-20,Oct-2,ELF1_(SC-631),Max,GR,CEBPB,GTF2F1_(RAP-74),CTCF,GABP,HMGN3,E2F4,POU2F2,TAF1,ETS1,MEF2A,E2F6,TR4,YY1_(C-20),BRCA1_(C-1863),TAF7_(SQ-8),Pol2(phosphoS2),NELFe,Pol2,Mxi1_(bHLH),PU.1,ATF3,NRSF,SP1	Name=148	NA	rs62120663	0.12	0.12	0.106	0.142572	0.171	0.0367	0.1455	0.1437	0.2188	0.18	0.02	0.18	0.12	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.662514	1.662514	NA	NA	NA	NA	0.087	NA	6.4956666
1002	12	51771040	51771040	T	C	exonic	GALNT6	NA	synonymous SNV	GALNT6:NM_007210:exon4:c.A603G:p.L201L	exonic	ENSG00000139629	NA	synonymous SNV	ENSG00000139629:ENST00000603641:exon2:c.A603G:p.L201L,ENSG00000139629:ENST00000543196:exon3:c.A603G:p.L201L,ENSG00000139629:ENST00000356317:exon4:c.A603G:p.L201L	NA	NA	12q13.13	NA	Name=CTCF,c-Myc	NA	NA	rs2277379	0.1	0.1	0.08	0.107428	0.0497	0.1726	0.1585	0.0469	0.1452	0.05	0.2	0.1	0.04	0.0824	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.956354	NA	NA	0.039302	0.047208	NA	0.043	NA	6.4952646
1003	4	759923	759923	C	T	UTR3	PCGF3	NM_006315:c.*56C>T	NA	NA	ncRNA_UTR3	ENSG00000185619	NA	NA	NA	NA	NA	4p16.3	NA	Name=CCNT2	Name=91	NA	rs191166241	0.0014	0.0014	NA	0.000798722	0.002	NA	0.0014	NA	0.001	0.0026	NA	0.0028	NA	NA	0.0035	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.360267	NA	NA	0.003457	0.001445	NA	NA	NA	6.494543
1003	12	120750517	120750517	A	G	exonic	SIRT4	NA	synonymous SNV	SIRT4:NM_012240:exon3:c.A756G:p.E252E	exonic	ENSG00000089163	NA	synonymous SNV	ENSG00000089163:ENST00000202967:exon3:c.A756G:p.E252E	Score=358;Name=lod=38	NA	12q24.31	NA	NA	NA	NA	rs16950058	0.08	0.08	0.066	0.0838658	0.0537	0.1151	0.1902	0.028	0.0828	0.06	0.11	0.15	0.03	0.0732	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.105366	NA	NA	0.045465	0.035179	NA	0.065	NA	6.4943016
1003	8	39871135	39871135	C	T	exonic	IDO2	NA	synonymous SNV	IDO2:NM_194294:exon10:c.C810T:p.S270S	exonic	ENSG00000188676	NA	synonymous SNV	ENSG00000188676:ENST00000389060:exon9:c.C771T:p.S257S,ENSG00000188676:ENST00000502986:exon10:c.C810T:p.S270S	NA	NA	8p11.21	Score=895;Name=V$CEBP_01	NA	NA	NA	rs2001923	0.08	0.08	0.077	0.0760783	0.0577	0.002	0.0692	0.1785	0.0378	0.06	0.01	0.08	0.18	0.0594	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.256695	NA	NA	0.056	0.169199	NA	0.116	NA	6.4935666
1003	19	7125519	7125519	G	A	exonic	INSR	NA	synonymous SNV	INSR:NM_001079817:exon16:c.C2997T:p.Y999Y,INSR:NM_000208:exon17:c.C3033T:p.Y1011Y	exonic	ENSG00000171105	NA	synonymous SNV	ENSG00000171105:ENST00000341500:exon16:c.C2997T:p.Y999Y,ENSG00000171105:ENST00000302850:exon17:c.C3033T:p.Y1011Y	Score=506;Name=lod=152	NA	19p13.2	NA	NA	NA	NA	rs1799815	0.03	0.03	0.026	0.0165735	0.0527	NA	0.0231	0.0038	0.0092	0.06	NA	0.02	0.002	0.0502	0.071	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.766915	NA	NA	0.071279	0.013845	NA	0.007	NA	6.4924876
1003	12	124377814	124377814	A	G	exonic	DNAH10	NA	synonymous SNV	DNAH10:NM_207437:exon52:c.A8676G:p.K2892K	exonic	ENSG00000197653	NA	synonymous SNV	ENSG00000197653:ENST00000409039:exon52:c.A8676G:p.K2892K	Score=346;Name=lod=34	NA	12q24.31	NA	NA	NA	NA	rs6488908	0.07	0.07	0.054	0.0682907	0.0606	0.001	0.0504	0.1694	0.0215	0.06	NA	0.06	0.15	0.059	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.935352	NA	NA	0.054984	0.125504	NA	0.058	NA	6.4920826
1003	7	91726927	91726927	A	C	exonic	AKAP9	NA	synonymous SNV	AKAP9:NM_005751:exon42:c.A10426C:p.R3476R,AKAP9:NM_147185:exon42:c.A10402C:p.R3468R	exonic	ENSG00000127914	NA	synonymous SNV	ENSG00000127914:ENST00000394534:exon16:c.A3964C:p.R1322R,ENSG00000127914:ENST00000358100:exon41:c.A10276C:p.R3426R,ENSG00000127914:ENST00000356239:exon42:c.A10426C:p.R3476R,ENSG00000127914:ENST00000359028:exon42:c.A10438C:p.R3480R	Score=507;Name=lod=153	NA	7q21.2	Score=831;Name=V$EVI1_04	NA	NA	NA	rs1063243	0.36	0.36	0.374	0.377396	0.3867	0.1617	0.3573	0.5212	0.41	0.39	0.17	0.38	0.54	0.3846	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.753245	NA	NA	0.403605	0.529505	NA	0.42	NA	6.4917616
1003	21	31709691	31709691	G	A	exonic	KRTAP27-1	NA	nonsynonymous SNV	KRTAP27-1:NM_001077711:exon1:c.C296T:p.A99V	exonic	ENSG00000206107	NA	nonsynonymous SNV	ENSG00000206107:ENST00000382835:exon1:c.C296T:p.A99V	NA	NA	21q22.11	NA	NA	NA	NA	rs2244485	0.31	0.31	0.299	0.321286	0.4503	0.2639	0.3473	0.1793	0.4213	0.45	0.22	0.35	0.16	0.4062	0.49	0.22	T	0.699	P	0.15	B	0.026	N	1.000	P	1.1	L	3.98	T	-0.935	T	0.000	T	0.023	0.33	5.791	0.262	0.039	0.536	4.478	0.330292	NA	NA	0.485349	0.222197	NA	0.297	NA	6.4914844
1003	2	86272758	86272758	G	A	exonic	POLR1A	NA	synonymous SNV	POLR1A:NM_015425:exon20:c.C2868T:p.L956L	exonic	ENSG00000068654	NA	synonymous SNV	ENSG00000068654:ENST00000263857:exon20:c.C2868T:p.L956L,ENSG00000068654:ENST00000409681:exon20:c.C2868T:p.L956L	Score=493;Name=lod=134	NA	2p11.2	NA	NA	NA	NA	rs1561328	0.19	0.19	0.193	0.217652	0.0427	0.2252	0.0764	0.5371	0.0583	0.04	0.21	0.08	0.49	0.0892	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.842787	NA	NA	0.043767	0.437402	NA	0.174	NA	6.4909996
1003	5	149495395	149495395	T	C	exonic	PDGFRB	NA	synonymous SNV	PDGFRB:NM_002609:exon23:c.A3252G:p.P1084P	exonic	ENSG00000113721	NA	synonymous SNV	ENSG00000113721:ENST00000261799:exon23:c.A3252G:p.P1084P	NA	NA	5q32	NA	Name=GATA-1,HMGN3,GABP,Pol2,CCNT2,ZBTB7A_(SC-34508)	Name=8	NA	rs246388	0.29	0.29	0.293	0.285343	0.3956	0.1071	0.3184	0.3041	0.3067	0.4	0.1	0.34	0.29	0.3474	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.354099	NA	NA	0.432907	0.332728	ID=COSM149993;OCCURENCE=1(stomach)	0.297	NA	6.4907596
1003	8	144993324	144993324	C	T	exonic	PLEC	NA	synonymous SNV	PLEC:NM_201378:exon32:c.G10623A:p.T3541T,PLEC:NM_201379:exon32:c.G10599A:p.T3533T,PLEC:NM_201380:exon32:c.G11076A:p.T3692T,PLEC:NM_201381:exon32:c.G10569A:p.T3523T,PLEC:NM_201382:exon32:c.G10665A:p.T3555T,PLEC:NM_201383:exon32:c.G10677A:p.T3559T,PLEC:NM_201384:exon32:c.G10665A:p.T3555T,PLEC:NM_000445:exon33:c.G10746A:p.T3582T	exonic	ENSG00000178209	NA	synonymous SNV	ENSG00000178209:ENST00000322810:exon32:c.G11076A:p.T3692T,ENSG00000178209:ENST00000345136:exon32:c.G10665A:p.T3555T,ENSG00000178209:ENST00000354589:exon32:c.G10665A:p.T3555T,ENSG00000178209:ENST00000354958:exon32:c.G10599A:p.T3533T,ENSG00000178209:ENST00000356346:exon32:c.G10623A:p.T3541T,ENSG00000178209:ENST00000357649:exon32:c.G10677A:p.T3559T,ENSG00000178209:ENST00000398774:exon32:c.G10569A:p.T3523T,ENSG00000178209:ENST00000527096:exon32:c.G10734A:p.T3578T,ENSG00000178209:ENST00000436759:exon33:c.G10746A:p.T3582T	NA	NA	8q24.3	Score=913;Name=V$E47_02	NA	NA	NA	rs6984820	0.24	0.24	0.218	0.234026	0.4235	0.1349	0.2983	0.0348	0.365	0.42	0.15	0.3	0.04	0.3451	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.646863	NA	NA	0.408154	0.089701	NA	0.275	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000078835.3;CLNDSDB=.;CLNDSDBID=.	6.4899126
1003	7	45805377	45805377	G	T	ncRNA_intronic	SEPT7P2	NA	NA	NA	ncRNA_exonic	ENSG00000214765	NA	NA	NA	Score=616;Name=lod=424	NA	7p12.3	Score=892;Name=V$OCT1_03	NA	NA	NA	rs56105655	0.17	0.17	0.125	0.176917	0.1769	0.1181	0.1182	0.3548	0.0389	0.17	0.1	0.14	0.27	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.362847	NA	NA	NA	NA	NA	NA	NA	6.4897666
1003	12	49427652	49427652	C	T	exonic	MLL2	NA	synonymous SNV	MLL2:NM_003482:exon39:c.G10836A:p.Q3612Q	exonic	ENSG00000167548	NA	synonymous SNV	ENSG00000167548:ENST00000301067:exon39:c.G10836A:p.Q3612Q	Score=639;Name=lod=526	NA	12q13.12	NA	NA	NA	NA	rs3782357	0.41	0.41	0.413	0.44349	0.3489	0.4444	0.2911	0.5726	0.4734	0.35	0.41	0.3	0.56	0.4616	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.185677	NA	NA	0.367056	0.528526	ID=COSM431202,COSM431203;OCCURENCE=1(breast)	0.326	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000080105.1;CLNDSDB=.;CLNDSDBID=.	6.4891106
1003	4	106604190	106604190	A	G	exonic	INTS12	NA	synonymous SNV	INTS12:NM_001142471:exon7:c.T1089C:p.P363P,INTS12:NM_020395:exon8:c.T1089C:p.P363P	exonic	ENSG00000138785	NA	synonymous SNV	ENSG00000138785:ENST00000451321:exon7:c.T1089C:p.P363P,ENSG00000138785:ENST00000340139:exon8:c.T1089C:p.P363P,ENSG00000138785:ENST00000394735:exon8:c.T1089C:p.P363P	Score=597;Name=lod=355	NA	4q24	NA	NA	NA	NA	rs35370743	0.04	0.04	0.032	0.0249601	0.0636	NA	0.0562	0.003	0.0184	0.07	NA	0.07	0.0041	0.0475	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.198288	2.198288	NA	0.066977	0.011121	NA	0.029	NA	6.4885896
1003	2	228416712	228416712	A	G	exonic	AGFG1	NA	synonymous SNV	AGFG1:NM_001135189:exon10:c.A1296G:p.T432T,AGFG1:NM_001135188:exon11:c.A1416G:p.T472T,AGFG1:NM_004504:exon11:c.A1416G:p.T472T,AGFG1:NM_001135187:exon12:c.A1488G:p.T496T	exonic	ENSG00000173744	NA	synonymous SNV	ENSG00000173744:ENST00000373671:exon10:c.A1296G:p.T432T,ENSG00000173744:ENST00000310078:exon11:c.A1416G:p.T472T,ENSG00000173744:ENST00000409171:exon11:c.A1416G:p.T472T,ENSG00000173744:ENST00000409315:exon11:c.A1353G:p.T451T,ENSG00000173744:ENST00000409979:exon12:c.A1488G:p.T496T	NA	NA	2q36.3	NA	NA	NA	NA	rs13426457	0.73	0.73	0.732	0.767173	0.7097	0.6885	0.7161	0.8578	0.8211	0.7	0.67	0.74	0.86	0.7469	0.86	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.084	T	0.000	T	.	0.675	7.614	-7.23	-1.864	-0.213	9.299	0.67543	NA	NA	0.721744	0.826146	NA	0.812	NA	6.4883226
1003	7	103155705	103155705	A	G	exonic	RELN	NA	synonymous SNV	RELN:NM_005045:exon50:c.T8046C:p.H2682H,RELN:NM_173054:exon50:c.T8046C:p.H2682H	exonic	ENSG00000189056	NA	synonymous SNV	ENSG00000189056:ENST00000343529:exon50:c.T8046C:p.H2682H,ENSG00000189056:ENST00000424685:exon50:c.T8046C:p.H2682H,ENSG00000189056:ENST00000428762:exon50:c.T8046C:p.H2682H	NA	NA	7q22.1	Score=762;Name=V$TCF11MAFG_01	NA	NA	NA	rs2229864	0.57	0.57	0.574	0.648363	0.3459	0.8353	0.4496	0.829	0.6636	0.35	0.8	0.4	0.78	0.4722	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.819289	NA	NA	0.360814	0.758284	NA	0.514	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000081242.3;CLNDSDB=.;CLNDSDBID=.	6.4877526
1003	15	42160635	42160635	C	G	exonic	SPTBN5	NA	synonymous SNV	SPTBN5:NM_016642:exon33:c.G6018C:p.G2006G	exonic	ENSG00000137877	NA	synonymous SNV	ENSG00000137877:ENST00000320955:exon33:c.G6018C:p.G2006G	Score=313;Name=lod=25	NA	15q15.1	NA	NA	NA	NA	rs2290556	0.05	0.05	0.038	0.0585064	0.0547	0.0159	0.0576	0.0416	0.1299	0.06	0.02	0.06	0.04	0.0748	0.065	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.624488	NA	NA	0.049457	0.033114	NA	0.043	NA	6.4877096
1003	1	201334382	201334382	G	A	exonic	TNNT2	NA	synonymous SNV	TNNT2:NM_001001432:exon8:c.C303T:p.I101I,TNNT2:NM_001001430:exon9:c.C318T:p.I106I,TNNT2:NM_001001431:exon9:c.C318T:p.I106I,TNNT2:NM_001276347:exon9:c.C318T:p.I106I,TNNT2:NM_000364:exon10:c.C348T:p.I116I,TNNT2:NM_001276345:exon10:c.C348T:p.I116I	exonic	ENSG00000118194	NA	synonymous SNV	ENSG00000118194:ENST00000360372:exon7:c.C303T:p.I101I,ENSG00000118194:ENST00000236918:exon8:c.C333T:p.I111I,ENSG00000118194:ENST00000367315:exon8:c.C318T:p.I106I,ENSG00000118194:ENST00000367317:exon8:c.C318T:p.I106I,ENSG00000118194:ENST00000438742:exon8:c.C303T:p.I101I,ENSG00000118194:ENST00000367318:exon9:c.C318T:p.I106I,ENSG00000118194:ENST00000367322:exon9:c.C318T:p.I106I,ENSG00000118194:ENST00000421663:exon9:c.C324T:p.I108I,ENSG00000118194:ENST00000422165:exon9:c.C333T:p.I111I,ENSG00000118194:ENST00000509001:exon9:c.C318T:p.I106I,ENSG00000118194:ENST00000455702:exon10:c.C348T:p.I116I,ENSG00000118194:ENST00000458432:exon10:c.C354T:p.I118I	Score=573;Name=lod=283	NA	1q32.1	NA	NA	NA	Score=106;Name=189586_0_-_106	rs3729547	0.67	0.67	0.658	0.695088	0.7416	0.5268	0.7997	0.6293	0.8354	0.74	0.56	0.81	0.6	0.7194	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.953821	NA	NA	0.718372	0.613255	ID=COSM1337831;OCCURENCE=1(large_intestine)	0.768	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000036579.1|RCV000125571.1;CLNDSDB=.|.;CLNDSDBID=.|.	6.4872946
1003	19	7083629	7083629	A	G	exonic	ZNF557	NA	synonymous SNV	ZNF557:NM_001044387:exon8:c.A1167G:p.S389S,ZNF557:NM_001044388:exon8:c.A1146G:p.S382S,ZNF557:NM_024341:exon8:c.A1167G:p.S389S	exonic	ENSG00000130544	NA	synonymous SNV	ENSG00000130544:ENST00000252840:exon8:c.A1167G:p.S389S,ENSG00000130544:ENST00000414706:exon8:c.A1167G:p.S389S,ENSG00000130544:ENST00000439035:exon8:c.A1146G:p.S382S	NA	NA	19p13.2	NA	Name=KAP1,ZNF274,SETDB1,ETS1	Name=101	NA	rs966591	0.44	0.44	0.437	0.445687	0.3777	0.5218	0.438	0.5227	0.3384	0.38	0.48	0.38	0.51	0.415	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.509367	NA	NA	0.387119	0.503749	NA	0.377	NA	6.4868476
1003	16	81253745	81253745	C	G	exonic	PKD1L2	NA	nonsynonymous SNV	PKD1L2:NM_001076780:exon1:c.G231C:p.K77N	exonic	ENSG00000166473,ENSG00000269323	NA	nonsynonymous SNV	ENSG00000166473:ENST00000337114:exon1:c.G231C:p.K77N,ENSG00000269323:ENST00000599697:exon1:c.G231C:p.K77N	NA	NA	16q23.2	NA	NA	NA	NA	rs9934272	0.32	0.32	0.291	0.307508	0.2903	0.4306	0.3256	0.2587	0.2515	0.31	0.4	0.32	0.26	0.2835	0.4	0.24	T	0.316	B	0.154	B	0.040	N	0.995	P	.	.	2.3	T	-0.893	T	0.000	T	0.095	1.599	11.3	-0.596	0.034	-0.351	5.375	1.598639	1.598639	0.1	0.273421	0.278295	NA	0.268	NA	6.4861124
1003	1	154516477	154516477	G	A	exonic	TDRD10	NA	nonsynonymous SNV	TDRD10:NM_001098475:exon9:c.G542A:p.R181Q,TDRD10:NM_182499:exon9:c.G542A:p.R181Q	exonic	ENSG00000163239	NA	nonsynonymous SNV	ENSG00000163239:ENST00000368480:exon9:c.G542A:p.R181Q,ENSG00000163239:ENST00000368482:exon9:c.G542A:p.R181Q	NA	NA	1q21.3	NA	NA	NA	NA	rs12750774	0.16	0.16	0.165	0.13139	0.3082	0.0308	0.2522	0.0144	0.1258	0.31	0.04	0.23	0.02	0.2324	0.31	0.09	T	0.29	B	0.02	B	0.570	N	1.000	P	0.46	N	1.97	T	-0.976	T	0.010	T	0.017	-0.084	3.59	-1.63	-0.453	-0.475	8.531	-0.083717	NA	0.31	0.306628	0.06128	ID=COSM146636;OCCURENCE=1(stomach)	0.239	NA	6.4861054
1003	6	42824907	42824907	G	A	exonic	GLTSCR1L	NA	synonymous SNV	GLTSCR1L:NM_015349:exon9:c.G2187A:p.A729A	exonic	ENSG00000112624	NA	synonymous SNV	ENSG00000112624:ENST00000394168:exon9:c.G2187A:p.A729A,ENSG00000112624:ENST00000314073:exon10:c.G2187A:p.A729A	Score=558;Name=lod=247	NA	6p21.1	NA	NA	NA	NA	rs9471932	0.06	0.06	0.06	0.0605032	0.0716	0.0069	0.0634	0.0968	0.0532	0.07	0.0035	0.06	0.09	0.053	0.092	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.544575	1.544575	NA	0.056628	0.092147	ID=COSM451478;OCCURENCE=1(breast)	0.101	NA	6.4854386
1003	11	6652618	6652618	C	T	exonic	DCHS1	NA	synonymous SNV	DCHS1:NM_003737:exon8:c.G3696A:p.P1232P	exonic	ENSG00000166341	NA	synonymous SNV	ENSG00000166341:ENST00000299441:exon8:c.G3696A:p.P1232P	Score=383;Name=lod=48	NA	11p15.4	Score=811;Name=V$RFX1_02	NA	NA	NA	rs2659871	0.46	0.46	0.457	0.451478	0.3797	0.4325	0.415	0.5946	0.3773	0.39	0.45	0.42	0.62	0.4153	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.272801	2.272801	NA	0.386522	0.559746	ID=COSM1356255;OCCURENCE=1(large_intestine)	0.572	NA	6.4851446
1003	3	149193684	149193684	T	C	exonic	TM4SF4	NA	synonymous SNV	TM4SF4:NM_004617:exon2:c.T249C:p.C83C	exonic	ENSG00000169903	NA	synonymous SNV	ENSG00000169903:ENST00000305354:exon2:c.T249C:p.C83C	Score=487;Name=lod=127	NA	3q25.1	Score=818;Name=V$CEBP_C	NA	NA	NA	rs1802837	0.27	0.27	0.252	0.229034	0.3966	0.0704	0.3026	0.23	0.1667	0.41	0.09	0.27	0.25	0.3611	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.398055	NA	NA	0.423954	0.258462	NA	0.304	NA	6.4850126
1004	1	11132217	11132217	G	A	exonic	EXOSC10	NA	synonymous SNV	EXOSC10:NM_002685:exon19:c.C2094T:p.R698R,EXOSC10:NM_001001998:exon20:c.C2169T:p.R723R	exonic	ENSG00000171824	NA	synonymous SNV	ENSG00000171824:ENST00000304457:exon19:c.C2094T:p.R698R,ENSG00000171824:ENST00000376936:exon20:c.C2169T:p.R723R	Score=471;Name=lod=109	NA	1p36.22	Score=792;Name=V$CMYB_01	NA	Name=3	NA	rs1130683	0.65	0.65	0.624	0.60623	0.7416	0.7837	0.755	0.2035	0.7229	0.75	0.81	0.75	0.23	0.7022	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.301334	2.301334	NA	0.738023	0.288924	NA	0.609	NA	6.4848436
1004	19	10694720	10694720	G	A	exonic	AP1M2	NA	synonymous SNV	AP1M2:NM_005498:exon2:c.C69T:p.G23G	exonic	ENSG00000129354	NA	synonymous SNV	ENSG00000129354:ENST00000250244:exon2:c.C69T:p.G23G,ENSG00000129354:ENST00000590923:exon2:c.C69T:p.G23G,ENSG00000129354:ENST00000591676:exon2:c.C69T:p.G23G	NA	NA	19p13.2	Score=773;Name=V$HTF_01	NA	NA	NA	rs11542916	0.04	0.04	0.031	0.0239617	0.0716	NA	0.0432	0.0053	0.0112	0.07	NA	0.06	0.01	0.0535	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.255087	NA	NA	0.056955	0.013237	ID=COSM1390160;OCCURENCE=1(large_intestine)	0.007	NA	6.4846116
1004	15	99500805	99500805	C	T	UTR3	IGF1R	NM_000875:c.*134C>T	NA	NA	ncRNA_UTR3	ENSG00000140443	NA	NA	NA	Score=361;Name=lod=39	NA	15q26.3	Score=774;Name=V$STAT5A_02	NA	NA	NA	rs55945252	0.01	0.01	0.007	0.00579073	0.0159	NA	0.0115	0.0015	0.0031	0.01	NA	0.01	0.002	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.845251	3.845251	NA	NA	NA	NA	NA	NA	6.4841
1004	13	77751892	77751892	C	T	exonic	MYCBP2	NA	synonymous SNV	MYCBP2:NM_015057:exon35:c.G5331A:p.L1777L	exonic	ENSG00000005810	NA	synonymous SNV	ENSG00000005810:ENST00000407578:exon35:c.G5331A:p.L1777L,ENSG00000005810:ENST00000544440:exon35:c.G5217A:p.L1739L,ENSG00000005810:ENST00000357337:exon36:c.G5217A:p.L1739L	Score=585;Name=lod=318	NA	13q22.3	Score=802;Name=V$PBX1_02	NA	Name=6	NA	rs4885445	0.61	0.61	0.557	0.55611	0.7435	0.5685	0.7709	0.3056	0.5368	0.74	0.57	0.78	0.34	0.6894	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.73758	NA	NA	0.749767	0.374262	NA	0.522	NA	6.4839996
1004	11	62751812	62751812	T	C	exonic	SLC22A6	NA	synonymous SNV	SLC22A6:NM_004790:exon1:c.A351G:p.P117P,SLC22A6:NM_153276:exon1:c.A351G:p.P117P,SLC22A6:NM_153277:exon1:c.A351G:p.P117P,SLC22A6:NM_153278:exon1:c.A351G:p.P117P	exonic	ENSG00000197901	NA	synonymous SNV	ENSG00000197901:ENST00000360421:exon1:c.A351G:p.P117P,ENSG00000197901:ENST00000377871:exon1:c.A351G:p.P117P,ENSG00000197901:ENST00000421062:exon1:c.A351G:p.P117P,ENSG00000197901:ENST00000458333:exon1:c.A351G:p.P117P,ENSG00000197901:ENST00000540654:exon1:c.A351G:p.P117P	NA	NA	11q12.3	Score=779;Name=V$YY1_02	NA	NA	NA	rs11568629	0.04	0.04	0.027	0.0223642	0.0646	0.005	0.0303	0.0061	0.0133	0.07	0.01	0.04	0.01	0.0495	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.892423	NA	NA	0.068753	0.015902	NA	0.087	NA	6.4838136
1004	16	1260636	1260636	G	A	exonic	CACNA1H	NA	synonymous SNV	CACNA1H:NM_001005407:exon20:c.G4023A:p.A1341A,CACNA1H:NM_021098:exon20:c.G4023A:p.A1341A	exonic	ENSG00000196557	NA	synonymous SNV	ENSG00000196557:ENST00000565831:exon19:c.G4023A:p.A1341A,ENSG00000196557:ENST00000348261:exon20:c.G4023A:p.A1341A,ENSG00000196557:ENST00000358590:exon20:c.G4023A:p.A1341A	NA	NA	16p13.3	Score=818;Name=V$YY1_02	NA	NA	NA	rs28365124	0.03	0.03	0.025	0.0335463	0.0567	NA	0.0317	NA	0.091	0.06	NA	0.03	NA	0.0606	0.066	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.179075	NA	NA	0.066086	0.009453	NA	0.014	NA	6.4832806
1004	10	97599537	97599537	G	C	exonic	ENTPD1	NA	synonymous SNV	ENTPD1:NM_001098175:exon3:c.G255C:p.V85V,ENTPD1:NM_001164178:exon3:c.G270C:p.V90V,ENTPD1:NM_001164179:exon3:c.G234C:p.V78V,ENTPD1:NM_001776:exon3:c.G234C:p.V78V	exonic	ENSG00000138185	NA	synonymous SNV	ENSG00000138185:ENST00000371205:exon3:c.G234C:p.V78V,ENSG00000138185:ENST00000371207:exon3:c.G270C:p.V90V,ENSG00000138185:ENST00000453258:exon3:c.G255C:p.V85V	NA	NA	10q24.1	Score=751;Name=V$TCF11MAFG_01	NA	NA	NA	rs61731067	0.05	0.05	0.049	0.0519169	0.0596	0.0407	0.0663	0.0234	0.0838	0.06	0.06	0.09	0.02	0.0596	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.598687	NA	NA	0.064419	0.034952	NA	0.043	NA	6.4830476
1004	4	84191031	84191031	A	G	exonic	COQ2	NA	synonymous SNV	COQ2:NM_015697:exon5:c.T894C:p.D298D	exonic	ENSG00000173085	NA	synonymous SNV	ENSG00000173085:ENST00000503915:exon4:c.T435C:p.D145D,ENSG00000173085:ENST00000311461:exon5:c.T744C:p.D248D,ENSG00000173085:ENST00000311469:exon5:c.T894C:p.D298D,ENSG00000173085:ENST00000439031:exon5:c.T783C:p.D261D	Score=601;Name=lod=368	NA	4q21.23	Score=782;Name=V$MEF2_02	NA	NA	NA	rs6535454	0.79	0.79	0.781	0.778155	0.7435	0.871	0.6801	0.8283	0.7198	0.73	0.87	0.75	0.79	0.738	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.051294	NA	NA	0.702468	0.814113	NA	0.812	CLINSIG=probable-non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000116808.2|RCV000124533.1;CLNDSDB=.|.;CLNDSDBID=.|.	6.4826986
1004	1	109810183	109810183	C	T	exonic	CELSR2	NA	synonymous SNV	CELSR2:NM_001408:exon16:c.C6027T:p.R2009R	exonic	ENSG00000143126	NA	synonymous SNV	ENSG00000143126:ENST00000271332:exon16:c.C6027T:p.R2009R	Score=596;Name=lod=353	NA	1p13.3	NA	NA	NA	NA	rs61761209	0.04	0.04	0.023	0.0351438	0.0805	0.001	0.0447	0.0023	0.0613	0.08	0.0017	0.06	0.002	0.0493	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.137723	NA	NA	0.054535	0.011575	NA	0.014	NA	6.4823316
1004	6	133138010	133138010	T	C	ncRNA_exonic	SNORD100	NA	NA	NA	ncRNA_exonic	ENSG00000221500	NA	NA	NA	Score=529;Name=lod=189	NA	6q23.2	NA	Name=CTCF,CTCF_(C-20)	Name=12	NA	rs9389034	0.43	0.43	0.419	0.448283	0.3767	0.2837	0.598	0.5688	0.4223	0.37	0.29	0.59	0.56	0.4197	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.573547	2.573547	NA	0.387996	0.535388	NA	0.399	NA	6.4822706
1004	8	23001988	23001988	A	G	exonic	TNFRSF10D	NA	nonsynonymous SNV	TNFRSF10D:NM_003840:exon7:c.T929C:p.L310S	exonic	ENSG00000173530	NA	nonsynonymous SNV	ENSG00000173530:ENST00000312584:exon7:c.T929C:p.L310S	NA	NA	8p21.3	NA	NA	NA	NA	rs1133782	0.69	0.69	0.643	0.700879	0.5984	0.9077	0.7147	0.5454	0.7935	0.6	0.94	0.69	0.53	0.652	0.94	0.12	T	.	.	.	.	0.592	N	1.000	P	.	.	-1.26	T	-0.962	T	0.000	T	0.026	-2.411	0.003	-0.341	-0.503	-3.687	2.805	-2.411191	NA	1	0.601163	0.562188	NA	0.638	NA	6.4817704
1004	11	102272277	102272277	G	T	exonic	TMEM123	NA	synonymous SNV	TMEM123:NM_052932:exon4:c.C595A:p.R199R	exonic	ENSG00000152558	NA	synonymous SNV	ENSG00000152558:ENST00000361236:exon3:c.C538A:p.R180R,ENSG00000152558:ENST00000398136:exon4:c.C595A:p.R199R,ENSG00000152558:ENST00000528969:exon4:c.C331A:p.R111R,ENSG00000152558:ENST00000532161:exon4:c.C331A:p.R111R	Score=425;Name=lod=71	NA	11q22.2	NA	NA	NA	NA	rs12275185	0.05	0.05	0.05	0.0365415	0.0626	0.004	0.0331	0.062	0.0112	0.07	0.0035	0.03	0.08	0.0508	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.893214	NA	NA	0.071972	0.068369	NA	0.014	NA	6.4812946
1004	4	187540996	187540996	C	T	exonic	FAT1	NA	synonymous SNV	FAT1:NM_005245:exon10:c.G6744A:p.P2248P	exonic	ENSG00000083857	NA	synonymous SNV	ENSG00000083857:ENST00000441802:exon10:c.G6744A:p.P2248P	NA	NA	4q35.2	Score=788;Name=V$MYOGNF1_01	NA	NA	NA	rs11931107	0.05	0.05	0.05	0.0423323	0.0676	0.0278	0.0317	0.0424	0.0389	0.08	0.04	0.04	0.03	0.0568	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.512258	NA	NA	0.061091	0.045611	NA	0.036	NA	6.4811756
1004	14	81259254	81259254	A	T	exonic	CEP128	NA	synonymous SNV	CEP128:NM_152446:exon13:c.T1410A:p.A470A	exonic	ENSG00000100629	NA	synonymous SNV	ENSG00000100629:ENST00000281129:exon13:c.T1410A:p.A470A,ENSG00000100629:ENST00000555265:exon14:c.T1410A:p.A470A	Score=441;Name=lod=83	NA	14q31.1	NA	NA	NA	NA	rs45535733	0.04	0.04	0.04	0.0297524	0.0696	0.0288	0.0346	0.0015	0.0245	0.07	0.02	0.03	0.0041	0.0459	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.347614	NA	NA	0.070116	0.01044	NA	0.072	NA	6.4810506
1004	9	136227260	136227260	A	G	exonic	SURF2	NA	nonsynonymous SNV	SURF2:NM_017503:exon5:c.A637G:p.S213G	exonic	ENSG00000148291	NA	nonsynonymous SNV	ENSG00000148291:ENST00000371964:exon5:c.A637G:p.S213G	NA	NA	9q34.2	NA	NA	NA	NA	rs12763	0.69	0.69	0.734	0.675919	0.6034	0.7024	0.634	0.8396	0.5317	0.59	0.73	0.65	0.83	0.6272	0.83	1	T	0.0	B	0.0	B	0.537	N	1.000	P	-1.1	N	1.61	T	-0.962	T	0.000	T	0.015	-2.07	0.006	0.96	-0.980	0.225	4.836	-2.069712	NA	0.63	0.621744	0.78847	NA	0.696	NA	6.4809894
1004	3	36898036	36898036	G	A	exonic	TRANK1	NA	synonymous SNV	TRANK1:NM_014831:exon12:c.C3045T:p.Y1015Y	exonic	ENSG00000168016	NA	synonymous SNV	ENSG00000168016:ENST00000428977:exon2:c.C1395T:p.Y465Y,ENSG00000168016:ENST00000301807:exon12:c.C1395T:p.Y465Y,ENSG00000168016:ENST00000429976:exon12:c.C3045T:p.Y1015Y	Score=309;Name=lod=24	NA	3p22.2	NA	NA	NA	NA	rs62245253	0.03	0.03	0.024	0.0233626	0.0666	NA	0.0346	0.0038	0.0215	0.07	NA	0.02	0.01	0.0509	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.02964	NA	NA	0.068393	0.01279	NA	0.014	NA	6.4807736
1004	3	179424862	179424862	A	G	exonic	USP13	NA	synonymous SNV	USP13:NM_003940:exon5:c.A618G:p.P206P	exonic	ENSG00000058056	NA	synonymous SNV	ENSG00000058056:ENST00000263966:exon5:c.A618G:p.P206P,ENSG00000058056:ENST00000496897:exon5:c.A423G:p.P141P	Score=491;Name=lod=132	NA	3q26.33	NA	NA	NA	NA	rs16830742	0.05	0.05	0.048	0.0501198	0.0646	0.003	0.0403	0.059	0.0787	0.07	0.0017	0.05	0.06	0.0528	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.675825	1.675825	NA	0.068721	0.045847	NA	0.029	NA	6.4805456
1004	22	17600977	17600977	G	A	exonic	CECR6	NA	synonymous SNV	CECR6:NM_031890:exon1:c.C1041T:p.F347F	exonic	ENSG00000183307	NA	synonymous SNV	ENSG00000183307:ENST00000331437:exon1:c.C1041T:p.F347F	Score=681;Name=lod=779	NA	22q11.1	Score=834;Name=V$HNF4_01_B	NA	NA	NA	rs5994165	0.47	0.47	0.429	0.476837	0.3847	0.495	0.5101	0.4856	0.5174	0.39	0.51	0.49	0.52	0.4307	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.785694	NA	NA	0.371858	0.472058	NA	0.188	NA	6.4794086
1004	12	52709880	52709880	A	G	exonic	KRT83	NA	synonymous SNV	KRT83:NM_002282:exon7:c.T1059C:p.A353A	exonic	ENSG00000170523	NA	synonymous SNV	ENSG00000170523:ENST00000293670:exon7:c.T1059C:p.A353A	NA	NA	12q13.13	Score=832;Name=V$ER_Q6	Name=CTCF	NA	NA	rs2852468	0.36	0.36	0.249	0.375799	0.4095	0.1885	0.317	0.5008	0.407	0.4	0.19	0.33	0.51	0.3783	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.286073	NA	NA	0.400233	0.476623	ID=COSM147520;OCCURENCE=1(stomach)	0.42	NA	6.4786336
1004	9	123367681	123367681	C	G	exonic	MEGF9	NA	synonymous SNV	MEGF9:NM_001080497:exon6:c.G1596C:p.V532V	exonic	ENSG00000106780	NA	synonymous SNV	ENSG00000106780:ENST00000373930:exon6:c.G1596C:p.V532V,ENSG00000106780:ENST00000426959:exon8:c.G1707C:p.V569V	Score=617;Name=lod=430	NA	9q33.2	NA	NA	NA	NA	rs56019987	0.03	0.03	0.026	0.0223642	0.0706	NA	0.0303	0.0038	0.0153	0.07	NA	0.03	0.01	0.0504	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.050105	NA	NA	0.06718	0.013716	NA	0.007	NA	6.4784866
1004	14	20844383	20844383	C	T	exonic	TEP1	NA	synonymous SNV	TEP1:NM_007110:exon42:c.G6129A:p.T2043T	exonic	ENSG00000129566	NA	synonymous SNV	ENSG00000129566:ENST00000545983:exon13:c.G1143A:p.T381T,ENSG00000129566:ENST00000555008:exon30:c.G4158A:p.T1386T,ENSG00000129566:ENST00000556935:exon40:c.G5805A:p.T1935T,ENSG00000129566:ENST00000262715:exon42:c.G6129A:p.T2043T	NA	NA	14q11.2	Score=907;Name=V$AP1FJ_Q2	NA	NA	NA	rs2228042	0.03	0.03	0.038	0.0375399	0.0676	0.002	0.0346	0.0083	0.0849	0.07	NA	0.03	0.0041	0.0559	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.096181	NA	NA	0.06593	0.021108	NA	0.007	NA	6.4772366
1004	12	124317874	124317874	C	T	exonic	DNAH10	NA	synonymous SNV	DNAH10:NM_207437:exon26:c.C4405T:p.L1469L	exonic	ENSG00000197653	NA	synonymous SNV	ENSG00000197653:ENST00000409039:exon26:c.C4405T:p.L1469L	Score=289;Name=lod=20	NA	12q24.31	NA	NA	NA	NA	rs78764267	0.04	0.04	0.032	0.0305511	0.0666	0.001	0.0389	0.0272	0.0225	0.07	NA	0.05	0.03	0.0647	0.076	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.521546	NA	NA	0.058157	0.042318	NA	0.051	NA	6.4772096
1004	15	83215251	83215251	T	C	exonic	CPEB1	NA	synonymous SNV	CPEB1:NM_001079535:exon9:c.A1290G:p.L430L,CPEB1:NM_001079533:exon10:c.A1305G:p.L435L,CPEB1:NM_001079534:exon10:c.A1290G:p.L430L,CPEB1:NM_030594:exon11:c.A1515G:p.L505L	exonic	ENSG00000214575,ENSG00000260836	NA	synonymous SNV	ENSG00000214575:ENST00000398592:exon9:c.A837G:p.L279L,ENSG00000214575:ENST00000423133:exon9:c.A1290G:p.L430L,ENSG00000214575:ENST00000261723:exon10:c.A1524G:p.L508L,ENSG00000214575:ENST00000398591:exon10:c.A1305G:p.L435L,ENSG00000214575:ENST00000564522:exon10:c.A1290G:p.L430L,ENSG00000214575:ENST00000450751:exon11:c.A1290G:p.L430L,ENSG00000214575:ENST00000562019:exon11:c.A1530G:p.L510L,ENSG00000214575:ENST00000563800:exon11:c.A1596G:p.L532L,ENSG00000214575:ENST00000568128:exon11:c.A1515G:p.L505L,ENSG00000214575:ENST00000568757:exon12:c.A1290G:p.L430L	Score=633;Name=lod=498	NA	15q25.2	Score=952;Name=V$HSF2_01	NA	NA	NA	rs1267657	0.42	0.42	0.424	0.441494	0.4155	0.4663	0.3905	0.4418	0.4785	0.43	0.45	0.39	0.4	0.3991	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.092854	NA	NA	0.374879	0.407206	NA	0.37	NA	6.4771876
1004	20	1703134	1703134	C	T	intergenic	SIRPG,LOC100289473	dist=64709;dist=50877	NA	NA	ncRNA_exonic	ENSG00000234282	NA	NA	NA	Score=284;Name=lod=19	NA	20p13	NA	Name=BATF,RXRA,MEF2C_(SC-13268),PU.1,SP1,IRF4_(M-17),MEF2A,TCF12,USF-1,NFKB,EBF	Name=15	NA	rs202512	0.49	0.49	0.463	0.493411	0.5229	0.3681	0.6182	0.562	0.411	0.51	0.4	0.56	0.53	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.982568	1.982568	NA	NA	NA	NA	0.522	NA	6.4771
1004	4	89607932	89607932	G	A	exonic	HERC3	NA	synonymous SNV	HERC3:NM_001271602:exon21:c.G2199A:p.E733E,HERC3:NM_014606:exon22:c.G2553A:p.E851E	exonic	ENSG00000138641	NA	synonymous SNV	ENSG00000138641:ENST00000512194:exon6:c.G732A:p.E244E,ENSG00000138641:ENST00000543130:exon10:c.G885A:p.E295E,ENSG00000138641:ENST00000264345:exon20:c.G2553A:p.E851E,ENSG00000138641:ENST00000402738:exon22:c.G2553A:p.E851E	Score=550;Name=lod=229	NA	4q22.1	NA	NA	NA	NA	rs7698491	0.08	0.08	0.079	0.128794	0.0557	0.0159	0.0346	0.2186	0.2658	0.06	0.02	0.04	0.2	0.0832	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.824584	NA	NA	0.051047	0.202224	NA	0.087	NA	6.4767196
1004	13	52520507	52520507	C	T	exonic	ATP7B	NA	synonymous SNV	ATP7B:NM_001005918:exon9:c.G2352A:p.T784T,ATP7B:NM_000053:exon13:c.G2973A:p.T991T,ATP7B:NM_001243182:exon14:c.G2640A:p.T880T	exonic	ENSG00000123191	NA	synonymous SNV	ENSG00000123191:ENST00000400370:exon5:c.G1683A:p.T561T,ENSG00000123191:ENST00000417240:exon7:c.G789A:p.T263T,ENSG00000123191:ENST00000344297:exon9:c.G2352A:p.T784T,ENSG00000123191:ENST00000448424:exon12:c.G2739A:p.T913T,ENSG00000123191:ENST00000242839:exon13:c.G2973A:p.T991T,ENSG00000123191:ENST00000400366:exon14:c.G2640A:p.T880T	NA	NA	13q14.3	NA	NA	NA	NA	rs1801246	0.03	0.03	0.022	0.0249601	0.0596	NA	0.0317	0.0023	0.0409	0.06	NA	0.03	0.01	0.058	0.073	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.759533	NA	NA	0.073007	0.011006	NA	0.08	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=Wilson's_disease|not_specified;CLNREVSTAT=single|single;CLNACC=RCV000029362.1|RCV000078047.1;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet:SNOMED_CT|.;CLNDSDBID=NBK1512:C0019202:277900:ORPHA905:88518009|.	6.4760596
1004	8	22428658	22428658	T	C	exonic	SORBS3	NA	nonsynonymous SNV	SORBS3:NM_001018003:exon7:c.T641C:p.I214T,SORBS3:NM_005775:exon18:c.T1667C:p.I556T	exonic	ENSG00000120896	NA	nonsynonymous SNV	ENSG00000120896:ENST00000523348:exon3:c.T500C:p.I167T,ENSG00000120896:ENST00000428103:exon7:c.T641C:p.I214T,ENSG00000120896:ENST00000523965:exon7:c.T641C:p.I214T,ENSG00000120896:ENST00000240123:exon18:c.T1667C:p.I556T	NA	NA	8p21.3	NA	NA	NA	NA	rs2449331	0.92	0.92	0.909	0.907548	0.9602	1	0.9524	0.7277	0.9693	0.96	1	0.96	0.76	0.9451	1	0.91	T	0.0	B	0.0	B	0.030	N	1.000	P	-2.045	N	3.45	T	-0.978	T	0.000	T	0.489	-2.292	0.004	4.68	0.726	1.483	7.689	-2.291552	NA	0.38	0.952375	0.749092	NA	0.761	NA	6.4756584
1004	12	95879734	95879734	C	T	exonic	METAP2	NA	synonymous SNV	METAP2:NM_006838:exon4:c.C405T:p.C135C	exonic	ENSG00000111142	NA	synonymous SNV	ENSG00000111142:ENST00000549808:exon2:c.C111T:p.C37C,ENSG00000111142:ENST00000261220:exon3:c.C336T:p.C112C,ENSG00000111142:ENST00000550777:exon3:c.C297T:p.C99C,ENSG00000111142:ENST00000323666:exon4:c.C405T:p.C135C,ENSG00000111142:ENST00000535095:exon4:c.C405T:p.C135C,ENSG00000111142:ENST00000546753:exon4:c.C336T:p.C112C,ENSG00000111142:ENST00000551840:exon4:c.C402T:p.C134C,ENSG00000111142:ENST00000553151:exon4:c.C333T:p.C111C	Score=572;Name=lod=282	NA	12q22	NA	NA	NA	NA	rs2305293	0.04	0.04	0.029	0.0367412	0.0716	0.0238	0.0317	0.0038	0.0624	0.07	0.02	0.03	0.01	0.0519	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.212654	NA	NA	0.067907	0.01498	NA	0.022	NA	6.4752596
1005	1	15441029	15441029	T	C	exonic	KAZN	NA	synonymous SNV	KAZN:NM_201628:exon15:c.T2226C:p.Y742Y	exonic	ENSG00000189337	NA	synonymous SNV	ENSG00000189337:ENST00000376030:exon15:c.T2226C:p.Y742Y	Score=549;Name=lod=227	NA	1p36.21	NA	NA	NA	NA	rs34135602	0.03	0.03	0.031	0.0283546	0.0626	0.002	0.0533	0.003	0.0368	0.06	0.0035	0.06	NA	0.0663	0.063	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.14514	NA	NA	0.062791	0.010213	NA	0.043	NA	6.4749756
1005	12	96380975	96380975	A	G	exonic	HAL	NA	synonymous SNV	HAL:NM_001258333:exon11:c.T297C:p.N99N,HAL:NM_001258334:exon12:c.T921C:p.N307N,HAL:NM_002108:exon12:c.T921C:p.N307N	exonic	ENSG00000084110	NA	synonymous SNV	ENSG00000084110:ENST00000541929:exon11:c.T297C:p.N99N,ENSG00000084110:ENST00000552509:exon11:c.T885C:p.N295N,ENSG00000084110:ENST00000261208:exon12:c.T921C:p.N307N,ENSG00000084110:ENST00000538703:exon12:c.T921C:p.N307N	NA	NA	12q23.1	Score=807;Name=V$PAX4_01,V$HEN1_01	NA	NA	NA	rs11108364	0.1	0.1	0.1	0.0984425	0.0646	0.0952	0.0461	0.1952	0.0429	0.06	0.1	0.06	0.18	0.068	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.802043	NA	NA	0.059419	0.184294	NA	0.13	NA	6.4746476
1005	14	93170993	93170993	C	T	exonic	LGMN	NA	synonymous SNV	LGMN:NM_005606:exon13:c.G1251A:p.P417P,LGMN:NM_001008530:exon14:c.G1251A:p.P417P	exonic	ENSG00000100600	NA	synonymous SNV	ENSG00000100600:ENST00000557434:exon12:c.G1080A:p.P360P,ENSG00000100600:ENST00000334869:exon13:c.G1251A:p.P417P,ENSG00000100600:ENST00000393218:exon14:c.G1251A:p.P417P	NA	NA	14q32.12	NA	Name=PAX5-N19,NFKB,ZEB1_(SC-25388),IRF4_(M-17),PU.1,BATF,EBF1_(C-8)	Name=16	NA	rs9791	0.3	0.3	0.269	0.281949	0.4245	0.0754	0.5519	0.2678	0.1759	0.42	0.07	0.48	0.24	0.3563	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.604832	1.604832	NA	0.411628	0.286882	NA	0.275	NA	6.4742386
1005	5	145393364	145393364	C	T	exonic	SH3RF2	NA	nonsynonymous SNV	SH3RF2:NM_152550:exon5:c.C799T:p.R267C	exonic	ENSG00000156463	NA	nonsynonymous SNV	ENSG00000156463:ENST00000511217:exon4:c.C799T:p.R267C,ENSG00000156463:ENST00000359120:exon5:c.C799T:p.R267C	NA	NA	5q32	Score=757;Name=V$E2F_01	NA	NA	NA	rs758037	0.61	0.61	0.598	0.609026	0.6312	0.7212	0.5692	0.3986	0.7832	0.65	0.71	0.61	0.44	0.6182	0.71	0.06	T	0.004	B	0.0	B	0.224	N	1.000	P	0.345	N	3.58	T	-1.083	T	0.000	T	0.048	1.234	10.01	1.22	-0.025	0.651	5.682	1.233918	1.233918	0.11	0.609884	0.437131	NA	0.507	NA	6.4740494
1005	12	8975901	8975901	C	T	exonic	A2ML1	NA	synonymous SNV	A2ML1:NM_144670:exon2:c.C186T:p.T62T	exonic	ENSG00000166535	NA	synonymous SNV	ENSG00000166535:ENST00000299698:exon2:c.C186T:p.T62T	Score=376;Name=lod=45	NA	12p13.31	NA	NA	NA	NA	rs17792974	0.1	0.1	0.092	0.130192	0.0567	0.1964	0.0504	0.0484	0.3047	0.05	0.23	0.05	0.04	0.0892	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.221006	NA	NA	0.046955	0.042448	NA	0.072	NA	6.4738116
1005	1	115399884	115399884	C	G	exonic	SYCP1	NA	synonymous SNV	SYCP1:NM_003176:exon4:c.C225G:p.P75P	exonic	ENSG00000198765	NA	synonymous SNV	ENSG00000198765:ENST00000369518:exon4:c.C225G:p.P75P,ENSG00000198765:ENST00000369522:exon4:c.C225G:p.P75P,ENSG00000198765:ENST00000455987:exon4:c.C225G:p.P75P	Score=499;Name=lod=142	NA	1p13.2	NA	NA	NA	NA	rs17544210	0.04	0.04	0.019	0.0383387	0.0686	0.0159	0.0519	0.0121	0.0562	0.06	0.02	0.06	0.01	0.0552	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.250571	NA	NA	0.069483	0.022923	NA	0.101	NA	6.4733836
1005	6	117045491	117045491	T	C	exonic	KPNA5	NA	synonymous SNV	KPNA5:NM_002269:exon10:c.T952C:p.L318L	exonic	ENSG00000196911	NA	synonymous SNV	ENSG00000196911:ENST00000356348:exon10:c.T952C:p.L318L,ENSG00000196911:ENST00000368564:exon10:c.T952C:p.L318L	Score=646;Name=lod=563	NA	6q22.1	NA	NA	NA	NA	rs2243368	0.03	0.03	0.024	0.0205671	0.0755	NA	0.0259	0.0038	0.0041	0.07	NA	0.03	0.01	0.0467	0.071	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.016415	NA	NA	0.071478	0.01566	NA	0.072	NA	6.4729886
1005	11	85968623	85968623	C	T	exonic	EED	NA	synonymous SNV	EED:NM_003797:exon6:c.C619T:p.L207L,EED:NM_152991:exon6:c.C619T:p.L207L	exonic	ENSG00000074266	NA	synonymous SNV	ENSG00000074266:ENST00000263360:exon6:c.C619T:p.L207L,ENSG00000074266:ENST00000327320:exon6:c.C619T:p.L207L,ENSG00000074266:ENST00000351625:exon6:c.C619T:p.L207L,ENSG00000074266:ENST00000528180:exon6:c.C619T:p.L207L	Score=659;Name=lod=637	NA	11q14.2	Score=931;Name=V$MEIS1_01	NA	NA	NA	rs974144	0.31	0.31	0.273	0.294728	0.4225	0.3135	0.2565	0.1203	0.407	0.42	0.33	0.27	0.14	0.3724	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.977272	NA	NA	0.39893	0.178928	ID=COSM429983;OCCURENCE=1(breast)	0.37	NA	6.4728366
1005	19	9267292	9267292	G	A	exonic	ZNF317	NA	synonymous SNV	ZNF317:NM_001190791:exon3:c.G30A:p.T10T,ZNF317:NM_020933:exon3:c.G30A:p.T10T	exonic	ENSG00000130803	NA	synonymous SNV	ENSG00000130803:ENST00000247956:exon3:c.G30A:p.T10T,ENSG00000130803:ENST00000360385:exon3:c.G30A:p.T10T,ENSG00000130803:ENST00000591278:exon3:c.G30A:p.T10T	NA	NA	19p13.2	NA	Name=PU.1	NA	NA	rs35822846	0.09	0.09	0.088	0.0834665	0.0527	0.0972	0.0821	0.1248	0.046	0.06	0.1	0.08	0.14	0.0728	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.333352	NA	NA	0.068721	0.12483	NA	0.08	NA	6.4724456
1005	12	48376291	48376291	G	A	exonic	COL2A1	NA	synonymous SNV	COL2A1:NM_033150:exon33:c.C2088T:p.G696G,COL2A1:NM_001844:exon34:c.C2295T:p.G765G	exonic	ENSG00000139219	NA	synonymous SNV	ENSG00000139219:ENST00000337299:exon33:c.C2088T:p.G696G,ENSG00000139219:ENST00000380518:exon34:c.C2295T:p.G765G	Score=509;Name=lod=156	NA	12q13.11	Score=785;Name=V$ROAZ_01	NA	NA	NA	rs2276454	0.42	0.42	0.408	0.429712	0.3926	0.5556	0.3501	0.3563	0.4939	0.39	0.58	0.36	0.33	0.3958	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.098035	NA	NA	0.406512	0.348389	NA	0.399	NA	6.4717546
1005	5	176917897	176917897	C	T	exonic	PDLIM7	NA	synonymous SNV	PDLIM7:NM_005451:exon7:c.G546A:p.P182P,PDLIM7:NM_203352:exon7:c.G444A:p.P148P,PDLIM7:NM_213636:exon7:c.G546A:p.P182P	exonic	ENSG00000196923	NA	synonymous SNV	ENSG00000196923:ENST00000355572:exon7:c.G546A:p.P182P,ENSG00000196923:ENST00000355841:exon7:c.G546A:p.P182P,ENSG00000196923:ENST00000356618:exon7:c.G546A:p.P182P,ENSG00000196923:ENST00000359895:exon7:c.G444A:p.P148P,ENSG00000196923:ENST00000393551:exon7:c.G546A:p.P182P,ENSG00000196923:ENST00000486828:exon7:c.G546A:p.P182P,ENSG00000196923:ENST00000505074:exon7:c.G546A:p.P182P	Score=544;Name=lod=216	NA	5q35.3	NA	NA	NA	NA	rs1132445	0.04	0.04	0.038	0.0235623	0.0646	0.001	0.0375	0.0061	0.0184	0.07	0.0017	0.05	0.01	0.0541	0.076	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.862962	NA	NA	0.076279	0.01566	NA	0.007	NA	6.4716876
1005	2	86830876	86830876	C	A	UTR3	RNF103	NM_005667:c.*90G>T,NM_001198951:c.*90G>T	NA	NA	ncRNA_UTR3	ENSG00000239305	NA	NA	NA	Score=659;Name=lod=638	NA	2p11.2	Score=862;Name=V$HFH1_01	NA	NA	NA	rs3755000	0.05	0.05	0.046	0.0473243	0.0288	0.0526	0.0245	0.0893	0.0204	0.03	0.03	0.03	0.1	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.586027	2.586027	NA	NA	NA	NA	0.051	NA	6.4712
1005	22	19132061	19132061	C	T	exonic	DGCR14	NA	synonymous SNV	DGCR14:NM_022719:exon1:c.G93A:p.A31A	exonic	ENSG00000100056	NA	synonymous SNV	ENSG00000100056:ENST00000252137:exon1:c.G93A:p.A31A,ENSG00000100056:ENST00000434568:exon1:c.G93A:p.A31A	NA	NA	22q11.21	NA	Name=HMGN3,TAF1,E2F6_(H-50),YY1_(C-20),Pol2,NRSF,CCNT2,HEY1,THAP1_(SC-98174),Pol2(b),Sin3Ak-20,ZNF263,Pol2-4H8,YY1	NA	NA	rs2298274	0.09	0.09	0.093	0.0810703	0.0676	0.1468	0.0634	0.0726	0.0511	0.07	0.15	0.07	0.07	0.0699	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.429622	2.429622	NA	0.057974	0.076853	NA	0.109	NA	6.4711926
1005	15	42579984	42579984	G	A	exonic	GANC	NA	synonymous SNV	GANC:NM_198141:exon4:c.G297A:p.P99P	exonic	ENSG00000214013	NA	synonymous SNV	ENSG00000214013:ENST00000318010:exon4:c.G297A:p.P99P,ENSG00000214013:ENST00000562859:exon5:c.G297A:p.P99P,ENSG00000214013:ENST00000566442:exon5:c.G297A:p.P99P	Score=477;Name=lod=116	NA	15q15.1	NA	NA	NA	NA	rs16973008	0.11	0.11	0.1	0.147165	0.0477	0.0972	0.2911	0.1997	0.1278	0.04	0.06	0.23	0.21	0.0916	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.016992	3.016992	NA	0.056525	0.17635	NA	0.152	NA	6.4708416
1005	4	15964863	15964863	G	T	upstream	FGFBP2	NA	NA	NA	intronic	ENSG00000007062	NA	NA	NA	NA	Name=QT interval	4p15.32	NA	Name=CTCF,Rad21,CTCF_(C-20),CTCF_(SC-5916),SMC3_(ab9263)	Name=111	NA	rs4698433	0.3	0.3	0.258	0.345647	0.3628	0.2847	0.5043	0.1339	0.5644	0.34	0.25	0.48	0.16	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.17971	NA	NA	NA	NA	NA	0.435	NA	6.4705333
1005	6	29796369	29796369	A	T	exonic	HLA-G	NA	synonymous SNV	HLA-G:NM_002127:exon4:c.A393T:p.G131G	exonic	ENSG00000204632	NA	synonymous SNV	ENSG00000204632:ENST00000360323:exon3:c.A393T:p.G131G,ENSG00000204632:ENST00000376828:exon4:c.A408T:p.G136G,ENSG00000204632:ENST00000428701:exon4:c.A393T:p.G131G	NA	NA	6p22.1	NA	NA	Name=2	NA	rs3873252	0.06	0.06	0.036	0.0876597	0.0596	0.1954	0.0375	0.0008	0.1585	0.06	0.15	0.03	0.002	0.0738	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.058974	NA	NA	0.062938	0.014238	NA	0.094	NA	6.4703286
1005	1	152484129	152484129	G	A	exonic	LCE5A	NA	nonsynonymous SNV	LCE5A:NM_178438:exon2:c.G119A:p.C40Y	exonic	ENSG00000186207	NA	nonsynonymous SNV	ENSG00000186207:ENST00000334269:exon2:c.G119A:p.C40Y	NA	NA	1q21.3	NA	NA	NA	NA	rs2105117	0.56	0.56	0.542	0.521965	0.6223	0.6111	0.5346	0.3132	0.6002	0.63	0.64	0.58	0.33	0.6103	0.64	0.05	D	0.014	B	0.003	B	.	.	1.000	P	1.7	L	3.74	T	-0.971	T	0.005	T	0.108	-0.697	0.982	0.898	0.324	0.308	4.283	-0.696693	NA	NA	0.630814	0.351566	NA	0.63	NA	6.4699194
1005	9	100843417	100843417	A	G	intronic	NANS,TRIM14	NA	NA	NA	exonic	ENSG00000095380	NA	stoploss	ENSG00000095380:ENST00000427646:exon2:c.A347G:p.X116W	NA	NA	9q22.33	NA	NA	NA	NA	rs4237190	0.57	0.57	0.585	0.653554	0.4751	0.3641	0.6657	0.9561	0.7178	0.47	0.37	0.59	0.93	0.5552	0.93	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	.	.	.	.	.	0.462	6.51	2.06	0.167	-0.329	5.460	0.462238	NA	0.1	NA	NA	NA	0.659	NA	6.4697
1005	9	125330125	125330125	C	G	exonic	OR1L8	NA	nonsynonymous SNV	OR1L8:NM_001004454:exon1:c.G632C:p.R211P	exonic	ENSG00000171496	NA	nonsynonymous SNV	ENSG00000171496:ENST00000304865:exon1:c.G632C:p.R211P	NA	NA	9q33.2	NA	NA	NA	NA	rs10739614	0.74	0.74	0.739	0.722444	0.6143	0.9841	0.6513	0.7186	0.6196	0.6	0.99	0.65	0.72	0.6458	0.99	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-3.915	N	2.04	T	-0.962	T	0.000	T	0.096	-2.493	0.003	3.6	0.678	0.231	10.799	-2.493135	NA	1	0.603953	0.69882	NA	0.71	NA	6.4692804
1005	20	46279866	46279866	A	G	exonic	NCOA3	NA	synonymous SNV	NCOA3:NM_001174087:exon20:c.A3789G:p.Q1263Q,NCOA3:NM_001174088:exon20:c.A3765G:p.Q1255Q,NCOA3:NM_006534:exon20:c.A3780G:p.Q1260Q,NCOA3:NM_181659:exon20:c.A3792G:p.Q1264Q	exonic	ENSG00000124151	NA	synonymous SNV	ENSG00000124151:ENST00000341724:exon19:c.A3570G:p.Q1190Q,ENSG00000124151:ENST00000371997:exon20:c.A3765G:p.Q1255Q,ENSG00000124151:ENST00000371998:exon20:c.A3792G:p.Q1264Q,ENSG00000124151:ENST00000372004:exon20:c.A3780G:p.Q1260Q	Score=592;Name=lod=338	NA	20q13.12	NA	NA	NA	NA	rs28529067	0.13	0.13	0.081	0.119609	0.0726	0.0873	0.0663	0.2186	0.1053	0.08	0.09	0.07	0.31	0.0741	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.756906	NA	NA	0.050698	0.127442	ID=COSM1412259;OCCURENCE=1(large_intestine)	0.014	NA	6.4692686
1005	2	228758580	228758580	G	C	exonic	DAW1	NA	synonymous SNV	DAW1:NM_178821:exon5:c.G387C:p.T129T	exonic	ENSG00000123977	NA	synonymous SNV	ENSG00000123977:ENST00000309931:exon5:c.G387C:p.T129T,ENSG00000123977:ENST00000373666:exon5:c.G387C:p.T129T,ENSG00000123977:ENST00000545118:exon6:c.G342C:p.T114T	NA	NA	2q36.3	Score=798;Name=V$PAX4_01	NA	NA	NA	rs16824157	0.07	0.07	0.063	0.0696885	0.0686	0.0734	0.0447	0.0817	0.0685	0.07	0.06	0.05	0.08	0.0648	0.098	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.286544	1.286544	NA	0.064302	0.074217	NA	0.065	NA	6.4689646
1005	6	47646842	47646842	A	G	exonic	GPR111	NA	nonsynonymous SNV	GPR111:NM_153839:exon5:c.A239G:p.Q80R	exonic	ENSG00000164393	NA	nonsynonymous SNV	ENSG00000164393:ENST00000398742:exon3:c.A239G:p.Q80R,ENSG00000164393:ENST00000296862:exon4:c.A443G:p.Q148R,ENSG00000164393:ENST00000507065:exon4:c.A239G:p.Q80R,ENSG00000164393:ENST00000467205:exon5:c.A239G:p.Q80R	NA	NA	6p12.3	Score=727;Name=V$PAX4_04	NA	NA	NA	rs6907125	0.48	0.48	0.489	0.516973	0.6272	0.3085	0.4366	0.472	0.7362	0.62	0.3	0.49	0.49	0.5935	0.65	0.18	T	0.0	B	0.001	B	0.679	N	1.000	P	-0.895	N	2.1	T	-0.987	T	0.011	T	0.02	-0.723	0.897	-1.76	-0.415	0.159	6.430	-0.723488	NA	0.33	0.646508	0.474095	NA	0.435	NA	6.4661254
1005	10	103368654	103368654	T	C	exonic	DPCD	NA	nonsynonymous SNV	DPCD:NM_015448:exon5:c.T467C:p.L156S	exonic	ENSG00000166171	NA	nonsynonymous SNV	ENSG00000166171:ENST00000370151:exon5:c.T467C:p.L156S,ENSG00000166171:ENST00000370147:exon6:c.T508C:p.C170R,ENSG00000166171:ENST00000370148:exon6:c.T508C:p.C170R	NA	NA	10q24.32	NA	NA	NA	NA	rs7006	0.25	0.25	0.247	0.227236	0.3111	0.1637	0.2233	0.2882	0.1268	0.3	0.14	0.23	0.32	0.2499	0.32	0.79	T	0.0	B	0.001	B	0.032	N	0.001	P	0.205	N	1.63	T	-0.933	T	0.000	T	0.027	2.998	16	-0.552	-0.384	0.568	10.332	2.997571	2.997571	0	0.30686	0.307308	NA	0.297	NA	6.4654734
1005	17	16525824	16525824	T	C	exonic	ZNF624	NA	synonymous SNV	ZNF624:NM_020787:exon6:c.A2376G:p.L792L	exonic	ENSG00000197566	NA	synonymous SNV	ENSG00000197566:ENST00000311331:exon6:c.A2376G:p.L792L	NA	NA	17p11.2	NA	Name=ZNF274,SETDB1,KAP1	NA	NA	rs62072858	0.04	0.04	0.034	0.0301518	0.0845	NA	0.0432	0.0121	0.0204	0.08	NA	0.05	0.01	0.0494	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.277815	NA	NA	0.067326	0.019292	NA	0.007	NA	6.4654406
1006	9	139397707	139397707	G	A	exonic	NOTCH1	NA	synonymous SNV	NOTCH1:NM_017617:exon27:c.C5094T:p.D1698D	exonic	ENSG00000148400	NA	synonymous SNV	ENSG00000148400:ENST00000277541:exon27:c.C5094T:p.D1698D	Score=524;Name=lod=179	NA	9q34.3	NA	Name=CTCF	NA	NA	rs10521	0.58	0.58	0.553	0.553514	0.4046	0.9018	0.5115	0.5552	0.3753	0.4	0.88	0.51	0.58	0.4443	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.737093	NA	NA	0.353369	0.517096	ID=COSM1461158,COSM33747;OCCURENCE=11(haematopoietic_and_lymphoid_tissue),1(lung),2(large_intestine)	0.58	NA	6.4643976
1006	12	52710715	52710715	G	A	exonic	KRT83	NA	synonymous SNV	KRT83:NM_002282:exon5:c.C843T:p.A281A	exonic	ENSG00000170523	NA	synonymous SNV	ENSG00000170523:ENST00000293670:exon5:c.C843T:p.A281A	Score=426;Name=lod=72	NA	12q13.13	NA	Name=Pol2	NA	NA	rs2857669	0.36	0.36	0.383	0.375799	0.4095	0.1885	0.317	0.5008	0.407	0.4	0.19	0.33	0.51	0.3828	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.15587	NA	NA	0.410698	0.489787	ID=COSM147524;OCCURENCE=1(stomach)	0.428	NA	6.4636686
1006	12	58345606	58345606	T	C	exonic	XRCC6BP1	NA	synonymous SNV	XRCC6BP1:NM_033276:exon4:c.T381C:p.L127L	exonic	ENSG00000166896	NA	synonymous SNV	ENSG00000166896:ENST00000300145:exon4:c.T381C:p.L127L	Score=552;Name=lod=234	NA	12q14.1	NA	NA	NA	NA	rs17120203	0.14	0.14	0.145	0.176518	0.0527	0.0873	0.1585	0.3169	0.2188	0.05	0.1	0.15	0.31	0.1016	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.302529	1.302529	NA	0.048863	0.291064	NA	0.217	NA	6.4635036
1006	1	909238	909238	G	C	exonic	PLEKHN1	NA	nonsynonymous SNV	PLEKHN1:NM_001160184:exon13:c.G1355C:p.R452P,PLEKHN1:NM_032129:exon14:c.G1460C:p.R487P	exonic	ENSG00000187583	NA	nonsynonymous SNV	ENSG00000187583:ENST00000491024:exon2:c.G155C:p.R52P,ENSG00000187583:ENST00000379407:exon13:c.G1355C:p.R452P,ENSG00000187583:ENST00000379409:exon13:c.G1616C:p.R539P,ENSG00000187583:ENST00000379410:exon14:c.G1460C:p.R487P	NA	NA	1p36.33	NA	NA	NA	NA	rs3829740	0.74	0.74	0.769	0.776558	0.6183	0.8869	0.6931	0.8169	0.8303	0.61	0.89	0.67	0.81	0.6685	0.89	0.28	T	0.0	B	0.0	B	0.414	N	1.000	P	-0.55	N	1.0	T	-1.043	T	0.000	T	0.09	-0.295	2.592	2.45	0.456	0.311	2.650	-0.294888	NA	0.16	0.583256	0.780838	NA	0.681	NA	6.4632774
1006	16	2285357	2285357	C	T	exonic	E4F1	NA	synonymous SNV	E4F1:NM_004424:exon14:c.C2139T:p.I713I	exonic	ENSG00000167967	NA	synonymous SNV	ENSG00000167967:ENST00000565090:exon12:c.C1608T:p.I536I,ENSG00000167967:ENST00000301727:exon14:c.C2139T:p.I713I	Score=494;Name=lod=136	NA	16p13.3	NA	Name=Pol2	NA	NA	rs26840	0.32	0.32	0.287	0.310304	0.4046	0.4018	0.3184	0.0726	0.4346	0.42	0.39	0.31	0.08	0.3939	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.159915	NA	NA	0.405645	0.109895	NA	0.167	NA	6.4625216
1006	7	121653177	121653177	A	G	exonic	PTPRZ1	NA	synonymous SNV	PTPRZ1:NM_002851:exon12:c.A4077G:p.T1359T	exonic	ENSG00000106278	NA	synonymous SNV	ENSG00000106278:ENST00000393386:exon12:c.A4077G:p.T1359T	NA	NA	7q31.32	NA	NA	Name=12	NA	rs61732006	0.11	0.11	0.116	0.105431	0.0557	0.2093	0.0562	0.1528	0.0204	0.05	0.2	0.07	0.13	0.0739	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.265831	NA	NA	0.075581	0.15842	NA	0.116	NA	6.4614856
1006	6	26027433	26027433	G	A	exonic	HIST1H4B	NA	synonymous SNV	HIST1H4B:NM_003544:exon1:c.C48T:p.A16A	exonic	ENSG00000124529	NA	synonymous SNV	ENSG00000124529:ENST00000377364:exon1:c.C48T:p.A16A	NA	NA	6p22.2	NA	Name=MafK_(ab50322),Oct-2,CCNT2,FOSL1_(SC-183),Max,NFKB,HEY1,BCL3,FOXA2_(SC-6554),ZEB1_(SC-25388),ELF1_(SC-631),TBP,CHD2_(N-1250),GTF2F1_(RAP-74),RXRA,p300_(N-15),TCF12,USF-1,p300,ELK4,POU2F2,E2F4,FOXA1_(C-20),ZBTB33,ETS1,JunD,eGFP-JunB,TAF1,Pol2(b),GATA-1,SIRT6,BCLAF1_(M33-P5B11),c-Jun,Pbx3,TAF7_(SQ-8),Sin3Ak-20,YY1_(C-20),HA-E2F1,USF1_(SC-8983),Pol2-4H8,TR4,ERalpha_a,E2F6,IRF4_(M-17),ZNF263,GATA3_(SC-268),NRSF,Mxi1_(bHLH),RFX5_(N-494),Pol2,NELFe,Egr-1,STAT3,YY1,TCF4,Pol2(phosphoS2)	Name=148	NA	rs3752419	0.42	0.42	0.387	0.394369	0.3956	0.7123	0.4524	0.1309	0.3804	0.39	0.72	0.39	0.15	0.4047	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.61887	NA	NA	0.405116	0.192238	NA	0.239	NA	6.4612506
1006	1	211590328	211590328	G	T	ncRNA_intronic	LINC00467	NA	NA	NA	ncRNA_intronic	ENSG00000153363	NA	NA	NA	Score=313;Name=lod=25	NA	1q32.3	NA	NA	Name=127	NA	rs60555365	0.1	0.1	0.104	0.128195	0.2058	0.0506	0.0807	0.0477	0.271	0.2	0.03	0.1	0.04	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.089222	NA	NA	NA	NA	NA	0.109	NA	6.4608666
1006	14	64554517	64554517	A	G	exonic	SYNE2	NA	synonymous SNV	SYNE2:NM_015180:exon58:c.A11613G:p.V3871V,SYNE2:NM_182914:exon58:c.A11613G:p.V3871V	exonic	ENSG00000054654	NA	synonymous SNV	ENSG00000054654:ENST00000394768:exon6:c.A768G:p.V256V,ENSG00000054654:ENST00000555002:exon9:c.A1515G:p.V505V,ENSG00000054654:ENST00000344113:exon58:c.A11613G:p.V3871V,ENSG00000054654:ENST00000358025:exon58:c.A11613G:p.V3871V,ENSG00000054654:ENST00000554584:exon58:c.A11712G:p.V3904V,ENSG00000054654:ENST00000357395:exon59:c.A768G:p.V256V	NA	NA	14q23.2	NA	NA	NA	NA	rs17101637	0.1	0.1	0.1	0.102037	0.0517	0.0556	0.1009	0.1997	0.0706	0.05	0.06	0.11	0.21	0.0833	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.662995	NA	NA	0.071977	0.158946	NA	0.109	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118499.1;CLNDSDB=.;CLNDSDBID=.	6.4596896
1006	19	53644443	53644443	G	A	exonic	ZNF347	NA	synonymous SNV	ZNF347:NM_001172674:exon5:c.C1641T:p.C547C,ZNF347:NM_001172675:exon5:c.C1641T:p.C547C,ZNF347:NM_032584:exon5:c.C1638T:p.C546C	exonic	ENSG00000197937	NA	synonymous SNV	ENSG00000197937:ENST00000334197:exon5:c.C1638T:p.C546C,ENSG00000197937:ENST00000452676:exon5:c.C1641T:p.C547C,ENSG00000197937:ENST00000601469:exon5:c.C1641T:p.C547C	Score=317;Name=lod=26	NA	19q13.42	NA	NA	NA	NA	rs1661935	0.07	0.07	0.065	0.0553115	0.0795	NA	0.049	0.1165	0.0092	0.08	NA	0.06	0.14	0.0573	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.007229	NA	NA	0.070814	0.095552	NA	0.101	NA	6.4590526
1006	13	39424254	39424254	T	C	exonic	FREM2	NA	synonymous SNV	FREM2:NM_207361:exon9:c.T6459C:p.T2153T	exonic	ENSG00000150893	NA	synonymous SNV	ENSG00000150893:ENST00000280481:exon9:c.T6459C:p.T2153T	Score=426;Name=lod=72	NA	13q13.3	NA	NA	NA	NA	rs9548507	0.06	0.06	NA	0.091853	0.0885	0.001	0.2478	0.0802	0.0941	0.05	0.0017	0.17	0.05	0.1172	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.738605	NA	NA	0.002558	0.000908	NA	NA	NA	6.4584086
1006	16	72158950	72158950	T	C	intronic	PMFBP1	NA	NA	NA	intronic	ENSG00000118557	NA	NA	NA	NA	NA	16q22.2	Score=814;Name=V$COMP1_01	Name=Rad21,CTCF,Znf143_(16618-1-AP),SMC3_(ab9263),CTCF_(C-20),ZBTB7A_(SC-34508),CTCF_(SC-5916)	Name=145	NA	rs3812986	0.54	0.54	0.559	0.584864	0.5417	0.381	0.415	0.8003	0.6687	0.54	0.4	0.44	0.77	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.815938	NA	NA	NA	NA	NA	0.638	NA	6.4583
1006	8	1808256	1808256	A	G	exonic	ARHGEF10	NA	synonymous SNV	ARHGEF10:NM_014629:exon4:c.A387G:p.V129V	exonic	ENSG00000104728	NA	synonymous SNV	ENSG00000104728:ENST00000262112:exon4:c.A459G:p.V153V,ENSG00000104728:ENST00000349830:exon4:c.A387G:p.V129V,ENSG00000104728:ENST00000398564:exon4:c.A459G:p.V153V,ENSG00000104728:ENST00000520359:exon4:c.A387G:p.V129V,ENSG00000104728:ENST00000398560:exon5:c.A459G:p.V153V,ENSG00000104728:ENST00000518288:exon5:c.A459G:p.V153V	Score=481;Name=lod=120	NA	8p23.3	NA	NA	NA	NA	rs749822	0.07	0.07	0.067	0.0571086	0.0736	0.1002	0.0706	0.0242	0.0307	0.07	0.1	0.06	0.05	0.0591	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.130349	NA	NA	0.076744	0.02315	NA	0.094	NA	6.4572226
1006	22	32784051	32784051	T	C	exonic	C22orf28	NA	synonymous SNV	C22orf28:NM_014306:exon12:c.A1446G:p.V482V	exonic	ENSG00000100220	NA	synonymous SNV	ENSG00000100220:ENST00000216038:exon12:c.A1446G:p.V482V	Score=592;Name=lod=338	NA	22q12.3	NA	NA	NA	NA	rs11635	0.17	0.17	0.136	0.163139	0.0467	0.4593	0.0893	0.0915	0.1268	0.05	0.47	0.1	0.06	0.1064	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.283445	1.283445	NA	0.056512	0.10236	NA	0.087	NA	6.4570546
1006	8	145114643	145114643	G	A	exonic	OPLAH	NA	synonymous SNV	OPLAH:NM_017570:exon3:c.C222T:p.I74I	exonic	ENSG00000178814	NA	synonymous SNV	ENSG00000178814:ENST00000426825:exon3:c.C222T:p.I74I	NA	NA	8q24.3	NA	Name=USF-1,Sin3Ak-20	NA	NA	rs6558292	0.07	0.07	0.076	0.066893	0.0815	0.001	0.0548	0.1399	0.0297	0.08	0.0017	0.06	0.15	0.0614	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.616898	NA	NA	0.066745	0.12454	NA	0.08	NA	6.4570216
1006	3	64133182	64133182	G	A	exonic	PRICKLE2	NA	synonymous SNV	PRICKLE2:NM_198859:exon7:c.C984T:p.N328N	exonic	ENSG00000163637	NA	synonymous SNV	ENSG00000163637:ENST00000295902:exon7:c.C984T:p.N328N,ENSG00000163637:ENST00000564377:exon8:c.C1152T:p.N384N	NA	NA	3p14.1	NA	NA	NA	NA	rs34460293	0.04	0.04	0.045	0.0547125	0.0676	0.004	0.0461	0.0446	0.1135	0.07	0.01	0.05	0.04	0.0656	0.077	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.407902	NA	NA	0.076744	0.053563	NA	0.022	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118061.2;CLNDSDB=.;CLNDSDBID=.	6.4567226
1006	2	141267573	141267573	G	A	exonic	LRP1B	NA	synonymous SNV	LRP1B:NM_018557:exon52:c.C8322T:p.C2774C	exonic	ENSG00000168702	NA	synonymous SNV	ENSG00000168702:ENST00000389484:exon52:c.C8322T:p.C2774C	Score=603;Name=lod=378	NA	2q22.1	NA	NA	NA	NA	rs35821928	0.04	0.04	0.031	0.0347444	0.0716	NA	0.0432	0.0257	0.0389	0.08	NA	0.06	0.02	0.0587	0.081	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.30228	1.30228	NA	0.080465	0.031775	NA	0.116	NA	6.4559016
1006	8	16907125	16907125	G	A	intronic	MICU3	NA	NA	NA	intronic	ENSG00000155970	NA	NA	NA	NA	NA	8p22	Score=725;Name=V$PPARG_01	Name=FOXA1_(C-20),HDAC2_(SC-6296),TCF4,FOXA2_(SC-6554),CEBPB,p300	Name=14	NA	rs2014286	0.4	0.4	0.434	0.405152	0.1521	0.5863	0.2305	0.7345	0.1575	0.14	0.59	0.23	0.71	0.2367	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.377471	NA	NA	0.15545	0.633562	NA	0.333	NA	6.45575
1006	12	58350631	58350631	C	T	exonic	XRCC6BP1	NA	synonymous SNV	XRCC6BP1:NM_033276:exon6:c.C699T:p.H233H	exonic	ENSG00000166896	NA	synonymous SNV	ENSG00000166896:ENST00000300145:exon6:c.C699T:p.H233H	Score=507;Name=lod=153	NA	12q14.1	Score=737;Name=V$LUN1_01	NA	NA	NA	rs10122	0.53	0.53	0.521	0.551717	0.3668	0.7262	0.5447	0.556	0.5613	0.36	0.76	0.51	0.53	0.4689	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.624247	NA	NA	0.375736	0.541964	NA	0.529	NA	6.4552306
1006	5	140057535	140057535	G	A	exonic	HARS	NA	synonymous SNV	HARS:NM_001258040:exon5:c.C468T:p.C156C,HARS:NM_001258042:exon5:c.C408T:p.C136C,HARS:NM_001258041:exon6:c.C528T:p.C176C,HARS:NM_002109:exon6:c.C588T:p.C196C	exonic	ENSG00000170445	NA	synonymous SNV	ENSG00000170445:ENST00000431330:exon3:c.C246T:p.C82C,ENSG00000170445:ENST00000415192:exon4:c.C366T:p.C122C,ENSG00000170445:ENST00000307633:exon5:c.C408T:p.C136C,ENSG00000170445:ENST00000438307:exon5:c.C468T:p.C156C,ENSG00000170445:ENST00000504366:exon5:c.C381T:p.C127C,ENSG00000170445:ENST00000448240:exon6:c.C102T:p.C34C,ENSG00000170445:ENST00000457527:exon6:c.C528T:p.C176C,ENSG00000170445:ENST00000504156:exon6:c.C588T:p.C196C	Score=616;Name=lod=424	NA	5q31.3	NA	NA	NA	NA	rs2230361	0.04	0.04	0.039	0.0573083	0.0596	0.002	0.1138	0.0484	0.0838	0.07	NA	0.09	0.02	0.0788	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.382122	1.382122	NA	0.07314	0.056968	NA	0.051	NA	6.4551266
1006	19	55143452	55143452	T	C	exonic	LILRB1	NA	nonsynonymous SNV	LILRB1:NM_001081637:exon5:c.T425C:p.I142T,LILRB1:NM_001081638:exon5:c.T425C:p.I142T,LILRB1:NM_001081639:exon5:c.T425C:p.I142T,LILRB1:NM_006669:exon6:c.T425C:p.I142T	exonic	ENSG00000104972	NA	nonsynonymous SNV	ENSG00000104972:ENST00000396315:exon4:c.T425C:p.I142T,ENSG00000104972:ENST00000396317:exon4:c.T425C:p.I142T,ENSG00000104972:ENST00000396321:exon4:c.T425C:p.I142T,ENSG00000104972:ENST00000418536:exon4:c.T425C:p.I142T,ENSG00000104972:ENST00000421584:exon4:c.T425C:p.I142T,ENSG00000104972:ENST00000427581:exon4:c.T533C:p.I178T,ENSG00000104972:ENST00000448689:exon4:c.T425C:p.I142T,ENSG00000104972:ENST00000324602:exon5:c.T425C:p.I142T,ENSG00000104972:ENST00000396327:exon5:c.T425C:p.I142T,ENSG00000104972:ENST00000396332:exon5:c.T425C:p.I142T,ENSG00000104972:ENST00000434867:exon5:c.T425C:p.I142T,ENSG00000104972:ENST00000396331:exon6:c.T425C:p.I142T	NA	NA	19q13.42	NA	NA	NA	NA	rs1061680	0.46	0.46	0.438	0.4373	0.2465	0.5942	0.4553	0.6059	0.2311	0.25	0.59	0.42	0.64	0.355	0.64	1	T	0.0	B	0.001	B	0.000	N	1.000	P	-2.215	N	4.48	T	-1.052	T	0.000	T	0.065	-2.258	0.004	-0.625	-0.405	0.437	5.378	-2.258264	NA	1	0.276744	0.559918	NA	0.522	NA	6.4550894
1006	1	19595137	19595137	C	T	ncRNA_exonic	AKR7L	NA	NA	NA	exonic	ENSG00000211454	NA	nonsynonymous SNV	ENSG00000211454:ENST00000420396:exon4:c.G229A:p.A77T	NA	NA	1p36.13	Score=802;Name=V$SRF_C	NA	NA	NA	rs2235795	0.66	0.66	0.627	0.665136	0.6918	0.8016	0.7334	0.3964	0.8119	0.68	0.81	0.72	0.41	0.6876	0.81	0.35	T	0.003	B	0.011	B	0.039	N	1.000	P	.	.	3.67	T	-1.041	T	0.000	T	0.312	1.044	9.264	-4.47	-0.602	-0.058	7.771	1.043913	NA	0.74	0.665581	0.437585	NA	0.42	NA	6.455019
1007	5	78181577	78181577	T	C	exonic	ARSB	NA	synonymous SNV	ARSB:NM_000046:exon5:c.A972G:p.G324G,ARSB:NM_198709:exon6:c.A972G:p.G324G	exonic	ENSG00000113273	NA	synonymous SNV	ENSG00000113273:ENST00000264914:exon5:c.A972G:p.G324G,ENSG00000113273:ENST00000396151:exon6:c.A972G:p.G324G,ENSG00000113273:ENST00000565165:exon6:c.A972G:p.G324G	NA	NA	5q14.1	NA	NA	NA	NA	rs72762973	0.04	0.04	0.027	0.0265575	0.0875	NA	0.0461	0.0023	0.0102	0.08	NA	0.05	0.0041	0.0527	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.370494	1.370494	NA	0.071512	0.01498	NA	0.072	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000078006.1;CLNDSDB=.;CLNDSDBID=.	6.4549546
1007	5	148386525	148386525	T	G	exonic	SH3TC2	NA	synonymous SNV	SH3TC2:NM_024577:exon16:c.A3594C:p.P1198P	exonic	ENSG00000169247	NA	synonymous SNV	ENSG00000169247:ENST00000502274:exon1:c.A180C:p.P60P,ENSG00000169247:ENST00000504690:exon16:c.A3594C:p.P1198P,ENSG00000169247:ENST00000512049:exon16:c.A3573C:p.P1191P,ENSG00000169247:ENST00000515425:exon16:c.A3594C:p.P1198P	NA	NA	5q32	Score=741;Name=V$ROAZ_01	NA	NA	NA	rs6871030	0.43	0.43	0.437	0.383387	0.4046	0.2222	0.3055	0.4902	0.4387	0.43	0.28	0.39	0.63	0.4	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.421051	1.421051	NA	0.407209	0.562188	NA	0.442	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118337.2;CLNDSDB=.;CLNDSDBID=.	6.4548576
1007	4	5975538	5975538	G	A	intergenic	MIR378D1,JAKMIP1	dist=50483;dist=52388	NA	NA	exonic	ENSG00000181215	NA	nonsynonymous SNV	ENSG00000181215:ENST00000324058:exon4:c.C256T:p.R86W,ENSG00000181215:ENST00000531445:exon4:c.C1678T:p.R560W	NA	NA	4p16.2	NA	NA	NA	NA	rs16837960	0.53	0.53	0.556	0.522963	0.4493	0.6994	0.4899	0.4085	0.5951	0.45	0.71	0.52	0.45	0.4844	0.71	0.12	T	0.0	B	0.0	B	0.791	N	1.000	P	1.175	L	1.56	T	-0.952	T	0.000	T	0.171	1.484	10.91	-2.09	-0.336	1.190	3.221	1.483536	1.483536	0.11	0.445	0.402179	ID=COSM1486027,COSM447988;OCCURENCE=1(breast)	0.565	NA	6.4546334
1007	20	6069723	6069723	G	A	exonic	FERMT1	NA	synonymous SNV	FERMT1:NM_017671:exon10:c.C1153T:p.L385L	exonic	ENSG00000101311	NA	synonymous SNV	ENSG00000101311:ENST00000536936:exon9:c.C382T:p.L128L,ENSG00000101311:ENST00000217289:exon10:c.C1153T:p.L385L	Score=582;Name=lod=310	NA	20p12.3	NA	NA	NA	NA	rs35413391	0.04	0.04	0.028	0.0317492	0.0825	NA	0.0749	0.0038	0.0194	0.08	NA	0.08	0.01	0.0531	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.311522	NA	NA	0.076512	0.014753	NA	0.036	NA	6.4545546
1007	12	49434074	49434074	C	A	exonic	MLL2	NA	synonymous SNV	MLL2:NM_003482:exon31:c.G7479T:p.G2493G	exonic	ENSG00000167548	NA	synonymous SNV	ENSG00000167548:ENST00000301067:exon31:c.G7479T:p.G2493G	Score=478;Name=lod=117	NA	12q13.12	NA	NA	NA	NA	rs10747559	0.39	0.39	0.393	0.435503	0.3966	0.4514	0.3271	0.4796	0.4765	0.37	0.4	0.34	0.45	0.4197	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.591011	NA	NA	0.396594	0.460184	NA	0.341	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000080211.1;CLNDSDB=.;CLNDSDBID=.	6.4537726
1007	15	35045276	35045276	G	A	exonic	GJD2	NA	synonymous SNV	GJD2:NM_020660:exon2:c.C369T:p.S123S	exonic	ENSG00000159248	NA	synonymous SNV	ENSG00000159248:ENST00000290374:exon2:c.C369T:p.S123S	Score=821;Name=lod=2900	NA	15q14	NA	NA	NA	NA	rs35174018	0.07	0.07	0.049	0.0623003	0.0626	0.0873	0.0476	0.062	0.047	0.06	0.08	0.06	0.07	0.0754	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.167272	NA	NA	0.075035	0.063153	NA	0.167	NA	6.4536316
1007	3	100084432	100084432	G	A	exonic	TOMM70A	NA	synonymous SNV	TOMM70A:NM_014820:exon12:c.C1803T:p.Y601Y	exonic	ENSG00000154174	NA	synonymous SNV	ENSG00000154174:ENST00000284320:exon12:c.C1803T:p.Y601Y	Score=655;Name=lod=611	NA	3q12.2	NA	NA	NA	NA	rs277644	0.27	0.27	0.286	0.252796	0.0398	0.5129	0.1988	0.3775	0.0736	0.04	0.5	0.22	0.41	0.1248	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.732272	NA	NA	0.048488	0.308443	NA	0.21	NA	6.4535786
1007	5	231111	231111	T	C	exonic	SDHA	NA	synonymous SNV	SDHA:NM_004168:exon7:c.T891C:p.P297P	exonic	ENSG00000073578	NA	synonymous SNV	ENSG00000073578:ENST00000510361:exon6:c.T747C:p.P249P,ENSG00000073578:ENST00000264932:exon7:c.T891C:p.P297P,ENSG00000073578:ENST00000504309:exon7:c.T891C:p.P297P	Score=509;Name=lod=156	NA	5p15.33	Score=911;Name=V$PAX4_03	NA	NA	NA	rs1126417	0.63	0.63	0.589	0.653355	0.7475	0.3363	0.6902	0.7874	0.6759	0.75	0.33	0.7	0.73	0.7078	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.391199	NA	NA	0.7582	0.789151	NA	0.732	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118321.2;CLNDSDB=.;CLNDSDBID=.	6.4531666
1007	7	21659645	21659645	T	C	exonic	DNAH11	NA	synonymous SNV	DNAH11:NM_001277115:exon25:c.T4449C:p.I1483I	exonic	ENSG00000105877	NA	synonymous SNV	ENSG00000105877:ENST00000328843:exon25:c.T4464C:p.I1488I,ENSG00000105877:ENST00000409508:exon25:c.T4449C:p.I1483I	Score=538;Name=lod=205	NA	7p15.3	NA	NA	NA	NA	rs56029521	0.45	0.45	0.447	0.423323	0.4066	0.6954	0.3127	0.3578	0.3272	0.42	0.67	0.33	0.35	0.3959	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.594488	NA	NA	0.412104	0.368232	NA	0.5	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000079622.1;CLNDSDB=.;CLNDSDBID=.	6.4520626
1007	3	125643940	125643940	C	G	ncRNA_exonic	FAM86JP	NA	NA	NA	ncRNA_exonic	ENSG00000171084	NA	NA	NA	Score=358;Name=lod=38	NA	3q21.2	NA	Name=ERalpha_a	NA	NA	rs143065094	0.14	0.14	0.103	0.157748	0.2147	0.0972	0.1326	0.1619	0.1738	0.17	0.09	0.12	0.14	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.062149	NA	NA	NA	NA	NA	0.014	NA	6.4519666
1007	11	89413781	89413781	C	G	exonic	FOLH1B	NA	nonsynonymous SNV	FOLH1B:NM_153696:exon8:c.C453G:p.N151K	ncRNA_exonic	ENSG00000134612	NA	NA	NA	Score=568;Name=lod=271	NA	11q14.3	Score=758;Name=V$STAT5A_02	NA	NA	NA	rs10830339	0.23	0.23	0.19	0.225639	0.3718	0.1319	0.2478	0.1619	0.2423	0.33	0.13	0.28	0.16	0.3041	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.157406	2.157406	0	0.37267	0.213312	NA	0.188	NA	6.45143
1007	1	115601528	115601528	C	G	exonic	TSPAN2	NA	synonymous SNV	TSPAN2:NM_005725:exon5:c.G420C:p.G140G	exonic	ENSG00000134198	NA	synonymous SNV	ENSG00000134198:ENST00000369515:exon4:c.G345C:p.G115G,ENSG00000134198:ENST00000369514:exon5:c.G420C:p.G140G,ENSG00000134198:ENST00000369516:exon5:c.G420C:p.G140G,ENSG00000134198:ENST00000433172:exon5:c.G402C:p.G134G	Score=265;Name=lod=16	NA	1p13.2	NA	NA	NA	NA	rs3738702	0.08	0.08	0.086	0.0946486	0.0746	0.0169	0.0865	0.1974	0.0624	0.06	0.02	0.09	0.18	0.0715	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.771529	NA	NA	0.072558	0.169315	NA	0.13	NA	6.4480086
1007	6	32427748	32427748	C	T	intergenic	HLA-DRA,HLA-DRB5	dist=14922;dist=57406	NA	NA	ncRNA_exonic	ENSG00000196301	NA	NA	NA	Score=340;Name=lod=32	NA	6p21.32	Score=872;Name=V$ATF6_01	Name=c-Myc,Pol2,HA-E2F1	Name=6	NA	rs9268831	0.51	0.51	0.529	0.515775	0.5199	0.5188	0.6268	0.5076	0.4407	0.51	0.52	0.6	0.43	0.5319	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.210387	NA	NA	0.500502	0.493151	NA	0.565	NA	6.447698
1007	3	167034814	167034814	T	C	exonic	ZBBX	NA	synonymous SNV	ZBBX:NM_001199201:exon14:c.A1173G:p.L391L,ZBBX:NM_001199202:exon14:c.A1086G:p.L362L,ZBBX:NM_024687:exon14:c.A1173G:p.L391L	exonic	ENSG00000169064	NA	synonymous SNV	ENSG00000169064:ENST00000307529:exon11:c.A1173G:p.L391L,ENSG00000169064:ENST00000392767:exon11:c.A1173G:p.L391L,ENSG00000169064:ENST00000455345:exon13:c.A1173G:p.L391L,ENSG00000169064:ENST00000392764:exon14:c.A1086G:p.L362L,ENSG00000169064:ENST00000392766:exon14:c.A1173G:p.L391L	Score=289;Name=lod=20	NA	3q26.1	Score=789;Name=V$MEF2_03	NA	NA	NA	rs13068132	0.3	0.3	0.28	0.294529	0.4105	0.1865	0.3444	0.2103	0.365	0.41	0.18	0.36	0.24	0.385	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.120095	NA	NA	0.423547	0.260718	ID=COSM149511,COSM149510;OCCURENCE=1(stomach)	0.406	NA	6.4476196
1007	14	68029386	68029386	G	A	exonic	PLEKHH1	NA	synonymous SNV	PLEKHH1:NM_020715:exon7:c.G1038A:p.V346V	exonic	ENSG00000054690	NA	synonymous SNV	ENSG00000054690:ENST00000329153:exon7:c.G1038A:p.V346V	Score=336;Name=lod=31	NA	14q24.1	NA	NA	NA	NA	rs1885043	0.08	0.08	0.095	0.091254	0.0646	NA	0.0447	0.2443	0.0389	0.06	NA	0.04	0.24	0.0758	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.658344	NA	NA	0.079641	0.19514	NA	0.072	NA	6.4466256
1007	15	64967654	64967654	C	T	exonic	ZNF609	NA	synonymous SNV	ZNF609:NM_015042:exon4:c.C2601T:p.A867A	exonic	ENSG00000180357	NA	synonymous SNV	ENSG00000180357:ENST00000326648:exon4:c.C2601T:p.A867A	NA	NA	15q22.31	Score=857;Name=V$TAL1BETAE47_01,V$TAL1BETAITF2_01	NA	NA	NA	rs16948170	0.1	0.1	0.115	0.127396	0.0696	0.001	0.0519	0.3396	0.0838	0.07	NA	0.06	0.3	0.0855	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.106417	NA	NA	0.065015	0.291194	NA	0.174	NA	6.4465516
1007	2	17696573	17696573	C	T	exonic	RAD51AP2	NA	nonsynonymous SNV	RAD51AP2:NM_001099218:exon1:c.G3110A:p.G1037D	exonic	ENSG00000214842	NA	nonsynonymous SNV	ENSG00000214842:ENST00000399080:exon1:c.G3110A:p.G1037D	NA	NA	2p24.2	NA	NA	NA	NA	rs834514	0.58	0.58	0.533	0.580671	0.6183	0.8849	0.6326	0.1339	0.7955	0.61	0.87	0.61	0.17	0.6441	0.87	0.28	T	0.087	B	0.063	B	.	.	1.000	P	0.205	N	1.45	T	-1.071	T	0.000	T	0.078	0.781	8.123	2.29	0.246	0.320	5.672	0.781475	NA	0.38	0.624542	0.259935	NA	0.514	NA	6.4463914
1007	3	52864584	52864584	A	G	exonic	ITIH4	NA	synonymous SNV	ITIH4:NM_001166449:exon1:c.T75C:p.T25T,ITIH4:NM_002218:exon1:c.T75C:p.T25T	exonic	ENSG00000055955	NA	synonymous SNV	ENSG00000055955:ENST00000266041:exon1:c.T75C:p.T25T,ENSG00000055955:ENST00000346281:exon1:c.T75C:p.T25T,ENSG00000055955:ENST00000406595:exon1:c.T75C:p.T25T,ENSG00000055955:ENST00000485816:exon1:c.T75C:p.T25T	NA	NA	3p21.1	NA	Name=Pol2	Name=16	NA	rs2071042	0.5	0.5	0.49	0.508387	0.4046	0.372	0.5576	0.7042	0.456	0.41	0.43	0.57	0.66	0.4319	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.06682	NA	NA	0.38407	0.653881	NA	0.493	NA	6.4460966
1008	12	4662210	4662210	T	C	exonic	RAD51AP1	NA	synonymous SNV	RAD51AP1:NM_006479:exon7:c.T618C:p.S206S,RAD51AP1:NM_001130862:exon8:c.T669C:p.S223S	exonic	ENSG00000111247	NA	synonymous SNV	ENSG00000111247:ENST00000543041:exon6:c.T264C:p.S88S,ENSG00000111247:ENST00000352618:exon7:c.T618C:p.S206S,ENSG00000111247:ENST00000544927:exon7:c.T618C:p.S206S,ENSG00000111247:ENST00000228843:exon8:c.T669C:p.S223S,ENSG00000111247:ENST00000321524:exon8:c.T669C:p.S223S	NA	NA	12p13.32	NA	NA	NA	NA	rs17850028	0.05	0.05	0.035	0.0511182	0.0746	0.001	0.1816	0.0045	0.0491	0.08	NA	0.14	0.01	0.0733	0.14	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-1.053	T	0.001	T	.	0.602	7.243	1.21	0.377	0.278	3.119	0.601593	NA	NA	0.073971	0.015887	NA	0.036	NA	6.4447956
1008	2	132276254	132276254	A	G	ncRNA_exonic	LOC150776	NA	NA	NA	ncRNA_exonic	ENSG00000152117	NA	NA	NA	Score=574;Name=lod=288	NA	2q21.1	Score=876;Name=V$FOXJ2_02	NA	NA	NA	rs28621583	0.32	0.32	0.195	0.335264	0.2227	0.6806	0.4265	0.1346	0.3016	0.21	0.63	0.36	0.12	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.598465	NA	NA	NA	NA	NA	0.101	NA	6.4439666
1008	19	50562372	50562372	T	C	ncRNA_intronic	FLJ26850	NA	NA	NA	ncRNA_exonic	ENSG00000269540	NA	NA	NA	Score=376;Name=lod=45	NA	19q13.33	NA	Name=SETDB1,KAP1	NA	NA	rs11879743	0.46	0.46	0.477	0.478834	0.2227	0.746	0.4092	0.5227	0.4571	0.22	0.76	0.39	0.54	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.034368	NA	NA	NA	NA	NA	0.449	NA	6.4439666
1008	16	69752373	69752373	C	T	exonic	NQO1	NA	synonymous SNV	NQO1:NM_000903:exon2:c.G72A:p.E24E,NQO1:NM_001025433:exon2:c.G72A:p.E24E,NQO1:NM_001025434:exon2:c.G72A:p.E24E	exonic	ENSG00000181019	NA	synonymous SNV	ENSG00000181019:ENST00000320623:exon2:c.G72A:p.E24E,ENSG00000181019:ENST00000379046:exon2:c.G72A:p.E24E,ENSG00000181019:ENST00000379047:exon2:c.G72A:p.E24E,ENSG00000181019:ENST00000439109:exon2:c.G72A:p.E24E,ENSG00000181019:ENST00000561500:exon2:c.G72A:p.E24E,ENSG00000181019:ENST00000564043:exon2:c.G9A:p.E3E	Score=497;Name=lod=139	NA	16q22.1	NA	NA	NA	NA	rs689453	0.05	0.05	0.042	0.0405351	0.0835	0.001	0.0504	0.0446	0.0245	0.08	0.0017	0.06	0.05	0.0594	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.137513	NA	NA	0.079884	0.047771	NA	0.13	NA	6.4438826
1008	22	35660875	35660875	G	T	exonic	HMGXB4	NA	nonsynonymous SNV	HMGXB4:NM_001003681:exon5:c.G494T:p.G165V	exonic	ENSG00000100281	NA	nonsynonymous SNV	ENSG00000100281:ENST00000420166:exon4:c.G167T:p.G56V,ENSG00000100281:ENST00000216106:exon5:c.G494T:p.G165V,ENSG00000100281:ENST00000455359:exon5:c.G167T:p.G56V,ENSG00000100281:ENST00000444518:exon6:c.G167T:p.G56V	NA	NA	22q12.3	NA	NA	NA	NA	rs1053593	0.48	0.48	0.452	0.452476	0.6571	0.5248	0.5951	0.0696	0.5838	0.64	0.52	0.6	0.09	0.5779	0.66	0.13	T	0.012	B	0.022	B	0.957	N	1.000	P	0.55	N	0.95	T	-0.907	T	0.000	T	0.077	0.909	8.7	1.32	-0.119	1.069	14.603	0.909399	NA	0.06	0.655465	0.165229	NA	0.442	NA	6.4428684
1008	20	31876681	31876681	A	G	exonic	BPIFB1	NA	nonsynonymous SNV	BPIFB1:NM_033197:exon3:c.A250G:p.I84V	exonic	ENSG00000125999	NA	nonsynonymous SNV	ENSG00000125999:ENST00000253354:exon3:c.A250G:p.I84V,ENSG00000125999:ENST00000423645:exon3:c.A250G:p.I84V	NA	NA	20q11.21	NA	NA	NA	NA	rs1078761	0.34	0.34	0.356	0.330072	0.3052	0.245	0.3934	0.4939	0.1769	0.29	0.26	0.39	0.47	0.2972	0.47	0.15	T	0.016	B	0.061	B	0.001	N	1.000	P	1.735	L	3.47	T	-0.935	T	0.000	T	0.114	1.034	9.223	1.84	-0.045	0.794	9.344	1.033826	NA	0.13	0.28814	0.445756	ID=COSM443660;OCCURENCE=1(breast)	0.348	NA	6.4427934
1008	6	56470551	56470551	T	A	ncRNA_intronic	RNU6-71P	NA	NA	NA	exonic	ENSG00000151914	NA	nonsynonymous SNV	ENSG00000151914:ENST00000439203:exon26:c.A7264T:p.T2422S,ENSG00000151914:ENST00000446842:exon26:c.A7264T:p.T2422S,ENSG00000151914:ENST00000312431:exon36:c.A8242T:p.T2748S,ENSG00000151914:ENST00000361203:exon36:c.A8242T:p.T2748S,ENSG00000151914:ENST00000370769:exon36:c.A8242T:p.T2748S,ENSG00000151914:ENST00000370754:exon39:c.A8776T:p.T2926S	NA	NA	6p12.1	NA	NA	NA	NA	rs13194995	0.27	0.27	0.256	0.243411	0.3658	0.2252	0.3501	0.1218	0.2249	0.35	0.22	0.35	0.13	0.3183	0.37	0.76	T	0.403	B	0.12	B	0.646	N	1.000	P	.	.	1.0	T	-1.100	T	0.119	T	0.27	2.197	13.3	3.77	0.821	0.485	8.715	2.197006	2.197006	0.04	0.37356	0.159091	NA	0.29	NA	6.44234
1008	6	64150689	64150689	G	A	intergenic	LGSN,PTP4A1	dist=120807;dist=131231	NA	NA	ncRNA_exonic	ENSG00000218048	NA	NA	NA	Score=514;Name=lod=163	NA	6q12	NA	Name=Pol2	Name=4	NA	rs10755410	0.47	0.47	0.473	0.446086	0.5577	0.5327	0.415	0.2708	0.501	0.54	0.53	0.45	0.32	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.501332	NA	NA	NA	NA	NA	0.5	NA	6.4423
1008	2	118583100	118583100	G	A	exonic	DDX18	NA	synonymous SNV	DDX18:NM_006773:exon10:c.G1446A:p.T482T	exonic	ENSG00000088205	NA	synonymous SNV	ENSG00000088205:ENST00000415038:exon4:c.G438A:p.T146T,ENSG00000088205:ENST00000263239:exon10:c.G1446A:p.T482T	NA	NA	2q14.1	NA	NA	Name=11	NA	rs1052639	0.04	0.04	0.035	0.0379393	0.0736	0.001	0.0346	0.0295	0.0532	0.07	NA	0.04	0.02	0.0644	0.087	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.800765	NA	NA	0.08686	0.028824	NA	0.065	NA	6.4418066
1008	12	27235279	27235279	G	A	exonic	C12orf71	NA	synonymous SNV	C12orf71:NM_001080406:exon1:c.C138T:p.S46S	exonic	ENSG00000214700	NA	synonymous SNV	ENSG00000214700:ENST00000429849:exon1:c.C138T:p.S46S	NA	NA	12p11.23	NA	Name=MafK_(ab50322)	NA	NA	rs12228215	0.04	0.04	0.039	0.0251597	0.0676	0.0288	0.0216	0.0045	0.0082	0.07	0.04	0.02	0.01	0.0652	0.092	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.047563	NA	NA	0.092418	0.019659	NA	0.094	NA	6.4414486
1008	15	59499179	59499179	G	A	exonic	LDHAL6B	NA	nonsynonymous SNV	LDHAL6B:NM_033195:exon1:c.G40A:p.V14M	exonic	ENSG00000171989	NA	nonsynonymous SNV	ENSG00000171989:ENST00000307144:exon1:c.G40A:p.V14M	NA	NA	15q22.2	NA	NA	NA	NA	rs3809530	0.36	0.36	0.341	0.402756	0.2714	0.5496	0.3905	0.2814	0.5593	0.27	0.58	0.34	0.28	0.345	0.58	0.19	T	0.034	B	0.01	B	.	.	1.000	P	0.345	N	-0.62	T	-0.917	T	0.000	T	0.063	0.644	7.458	1.49	0.710	0.474	6.800	0.64408	NA	0.29	0.275991	0.290278	NA	0.304	NA	6.4409424
1008	12	125398039	125398039	G	C	exonic	UBC	NA	synonymous SNV	UBC:NM_021009:exon2:c.C279G:p.V93V	exonic	ENSG00000150991	NA	synonymous SNV	ENSG00000150991:ENST00000536769:exon1:c.C279G:p.V93V,ENSG00000150991:ENST00000339647:exon2:c.C279G:p.V93V,ENSG00000150991:ENST00000535131:exon2:c.C279G:p.V93V,ENSG00000150991:ENST00000535859:exon2:c.C279G:p.V93V,ENSG00000150991:ENST00000540351:exon2:c.C279G:p.V93V,ENSG00000150991:ENST00000540700:exon2:c.C279G:p.V93V,ENSG00000150991:ENST00000541645:exon2:c.C279G:p.V93V,ENSG00000150991:ENST00000546120:exon2:c.C279G:p.V93V,ENSG00000150991:ENST00000546271:exon2:c.C279G:p.V93V,ENSG00000150991:ENST00000538617:exon3:c.C279G:p.V93V	Score=723;Name=lod=1153	NA	12q24.31	Score=848;Name=V$ZID_01	NA	Name=2	NA	rs1071862	0.47	0.47	0.43	0.464257	0.7763	0.2202	0.549	0.177	0.7229	0.77	0.21	0.59	0.24	0.6587	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.561162	NA	NA	0.791047	0.268498	NA	0.464	NA	6.4406196
1008	6	29910265	29910265	G	T	UTR5	HLA-A	NM_001242758:c.-66G>T,NM_002116:c.-66G>T	NA	NA	ncRNA_exonic	ENSG00000227766	NA	NA	NA	NA	NA	6p22.1	NA	Name=Oct-2,HNF4G_(SC-6558),ELF1_(SC-631),NFKB,HEY1,GTF2F1_(RAP-74),TBP,USF2,HNF4A_(H-171),POU2F2,TAF1,Pol2-4H8,Sin3Ak-20,YY1_(C-20),TAF7_(SQ-8),YY1,Pol2(phosphoS2),Pol2,SP1,RFX5_(N-494)	Name=144	NA	rs41545520	NA	NA	0.052	0.101837	0.0596	0.2629	0.0403	0.0008	0.1595	NA	NA	NA	NA	NA	0.054	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.939766	NA	NA	NA	NA	NA	0.094	NA	6.4404
1008	15	90347792	90347792	C	A	exonic	ANPEP	NA	synonymous SNV	ANPEP:NM_001150:exon5:c.G954T:p.L318L	exonic	ENSG00000166825	NA	synonymous SNV	ENSG00000166825:ENST00000300060:exon5:c.G954T:p.L318L	Score=366;Name=lod=41	NA	15q26.1	NA	NA	NA	NA	rs41276916	0.04	0.04	0.036	0.0333466	0.0905	0.001	0.0375	0.0038	0.045	0.09	0.0035	0.03	0.01	0.0582	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.544354	NA	NA	0.077692	0.015455	NA	0.087	NA	6.4402746
1008	2	220406722	220406722	T	C	exonic	CHPF	NA	synonymous SNV	CHPF:NM_001195731:exon2:c.A18G:p.L6L,CHPF:NM_024536:exon2:c.A504G:p.L168L	exonic	ENSG00000123989	NA	synonymous SNV	ENSG00000123989:ENST00000243776:exon2:c.A504G:p.L168L,ENSG00000123989:ENST00000373891:exon2:c.A504G:p.L168L,ENSG00000123989:ENST00000535926:exon2:c.A18G:p.L6L	Score=346;Name=lod=34	NA	2q35	NA	Name=ZNF263,YY1_(C-20),TAF7_(SQ-8),SMC3_(ab9263),Pol2,CTCF_(SC-5916),ATF3,GABP,CTCFL_(SC-98982),Znf143_(16618-1-AP),E2F6_(H-50),ETS1,TBP,EBF1_(C-8),TCF12,CTCF,SRF,CTCF_(C-20),ELF1_(SC-631),Rad21,NFKB,ZEB1_(SC-25388),c-Myc	Name=134	NA	rs3731912	0.72	0.72	0.73	0.754792	0.7376	0.7609	0.6902	0.6778	0.9162	0.74	0.76	0.7	0.66	0.7673	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.407049	1.407049	NA	0.721601	0.679545	ID=COSM442363;OCCURENCE=1(breast)	0.572	NA	6.4401656
1008	21	44283574	44283574	C	T	exonic	WDR4	NA	synonymous SNV	WDR4:NM_001260474:exon4:c.G429A:p.G143G,WDR4:NM_018669:exon4:c.G429A:p.G143G,WDR4:NM_033661:exon4:c.G429A:p.G143G	exonic	ENSG00000160193	NA	synonymous SNV	ENSG00000160193:ENST00000330317:exon4:c.G429A:p.G143G,ENSG00000160193:ENST00000398208:exon4:c.G429A:p.G143G	NA	NA	21q22.3	NA	NA	Name=4	NA	rs11911090	0.07	0.07	0.072	0.0770767	0.0606	0.001	0.049	0.18	0.0532	0.07	0.0017	0.04	0.17	0.0778	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.008777	NA	NA	0.08814	0.178847	NA	0.072	NA	6.4401266
1008	2	3483205	3483205	C	T	exonic	TRAPPC12	NA	synonymous SNV	TRAPPC12:NM_016030:exon12:c.C2181T:p.F727F	exonic	ENSG00000171853	NA	synonymous SNV	ENSG00000171853:ENST00000415624:exon7:c.C678T:p.F226F,ENSG00000171853:ENST00000324266:exon12:c.C2181T:p.F727F,ENSG00000171853:ENST00000382110:exon12:c.C2181T:p.F727F	Score=451;Name=lod=91	NA	2p25.3	NA	NA	NA	NA	rs6767	0.46	0.46	0.499	0.485423	0.4185	0.4653	0.353	0.6006	0.5133	0.42	0.49	0.37	0.58	0.4213	0.58	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	1.098	9.482	-1.12	-0.489	0.604	10.880	1.098402	NA	NA	0.38686	0.559464	NA	0.594	NA	6.4400066
1008	17	4936972	4936972	G	A	exonic	SLC52A1	NA	nonsynonymous SNV	SLC52A1:NM_001104577:exon3:c.C812T:p.A271V,SLC52A1:NM_017986:exon3:c.C812T:p.A271V	exonic	ENSG00000132517	NA	nonsynonymous SNV	ENSG00000132517:ENST00000254853:exon3:c.C812T:p.A271V,ENSG00000132517:ENST00000424747:exon3:c.C812T:p.A271V,ENSG00000132517:ENST00000512825:exon3:c.C812T:p.A271V	Score=251;Name=lod=14	NA	17p13.2	NA	NA	NA	NA	rs346821	0.55	0.55	0.534	0.529153	0.6402	0.2331	0.6369	0.73	0.3722	0.64	0.23	0.66	0.73	0.5893	0.74	0.35	T	0.046	B	0.059	B	0.816	N	0.166	P	0.55	N	-0.73	T	-0.927	T	0.000	T	0.045	1.39	10.58	0.784	0.699	.	7.391	1.389727	1.389727	0.29	0.663953	0.735588	NA	0.71	NA	6.4398804
1008	15	90347783	90347783	C	T	exonic	ANPEP	NA	synonymous SNV	ANPEP:NM_001150:exon5:c.G963A:p.T321T	exonic	ENSG00000166825	NA	synonymous SNV	ENSG00000166825:ENST00000300060:exon5:c.G963A:p.T321T	Score=389;Name=lod=51	NA	15q26.1	NA	NA	NA	NA	rs17240240	0.05	0.05	0.05	0.0399361	0.0895	0.001	0.0389	0.028	0.046	0.09	0.0035	0.03	0.04	0.0598	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.308253	NA	NA	0.077576	0.034773	NA	0.101	NA	6.4397906
1008	7	11521428	11521428	A	G	exonic	THSD7A	NA	synonymous SNV	THSD7A:NM_015204:exon7:c.T2004C:p.Y668Y	exonic	ENSG00000005108	NA	synonymous SNV	ENSG00000005108:ENST00000423059:exon7:c.T2004C:p.Y668Y	Score=468;Name=lod=106	NA	7p21.3	NA	NA	NA	NA	rs61996277	0.04	0.04	0.036	0.0335463	0.0636	0.002	0.0865	0.0068	0.0337	0.07	0.0017	0.09	0.02	0.0765	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.091325	NA	NA	0.087238	0.018165	NA	0.051	NA	6.4393286
1008	6	7862631	7862631	G	C	exonic	BMP6	NA	synonymous SNV	BMP6:NM_001718:exon4:c.G1104C:p.V368V	exonic	ENSG00000153162	NA	synonymous SNV	ENSG00000153162:ENST00000283147:exon4:c.G1104C:p.V368V	Score=597;Name=lod=357	NA	6p24.3	Score=981;Name=V$USF_C	NA	NA	NA	rs17557	0.59	0.59	0.601	0.597644	0.3917	0.7411	0.6095	0.7481	0.4499	0.4	0.74	0.58	0.74	0.4637	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.339221	1.339221	NA	0.374884	0.692238	NA	0.688	NA	6.4363826
1009	11	59611362	59611362	G	A	exonic	GIF	NA	synonymous SNV	GIF:NM_005142:exon2:c.C246T:p.S82S	exonic	ENSG00000134812	NA	synonymous SNV	ENSG00000134812:ENST00000257248:exon2:c.C246T:p.S82S,ENSG00000134812:ENST00000541311:exon2:c.C171T:p.S57S	Score=329;Name=lod=29	NA	11q12.1	NA	NA	NA	NA	rs35792306	0.07	0.07	0.063	0.0537141	0.0785	0.0952	0.0259	0.003	0.0736	0.09	0.12	0.03	0.01	0.0747	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.684875	NA	NA	0.079162	0.019082	NA	0.029	NA	6.4343046
1009	1	92177938	92177938	A	G	exonic	TGFBR3	NA	synonymous SNV	TGFBR3:NM_001195683:exon13:c.T2025C:p.F675F,TGFBR3:NM_003243:exon13:c.T2028C:p.F676F,TGFBR3:NM_001195684:exon14:c.T2025C:p.F675F	exonic	ENSG00000069702	NA	synonymous SNV	ENSG00000069702:ENST00000525962:exon12:c.T2028C:p.F676F,ENSG00000069702:ENST00000212355:exon13:c.T2028C:p.F676F,ENSG00000069702:ENST00000465892:exon13:c.T2025C:p.F675F,ENSG00000069702:ENST00000370399:exon14:c.T2025C:p.F675F	Score=366;Name=lod=41	NA	1p22.1	Score=834;Name=V$CHOP_01	NA	NA	NA	rs1805113	0.31	0.31	0.3	0.279752	0.4304	0.0863	0.2882	0.3101	0.2771	0.44	0.11	0.32	0.33	0.366	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.91293	NA	NA	0.436047	0.343849	NA	0.333	NA	6.4342196
1009	1	111824209	111824209	G	A	ncRNA_exonic	CHIAP2	NA	NA	NA	ncRNA_exonic	ENSG00000203878	NA	NA	NA	Score=512;Name=lod=161	NA	1p13.2	NA	NA	Name=11	NA	rs6537690	0.2	0.2	0.211	0.201278	0.2326	0.13	0.1671	0.2428	0.2106	0.24	0.14	0.17	0.25	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.800386	2.800386	NA	NA	NA	NA	0.188	NA	6.4340666
1009	9	4564432	4564432	G	A	exonic	SLC1A1	NA	synonymous SNV	SLC1A1:NM_004170:exon4:c.G414A:p.T138T	exonic	ENSG00000106688	NA	synonymous SNV	ENSG00000106688:ENST00000262352:exon4:c.G414A:p.T138T	Score=567;Name=lod=268	NA	9p24.2	NA	Name=CTCF	NA	NA	rs2228622	0.31	0.31	0.305	0.328275	0.4095	0.2361	0.4582	0.1921	0.4315	0.39	0.23	0.41	0.21	0.3971	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.212239	NA	NA	0.426163	0.220154	NA	0.348	NA	6.4339036
1009	1	40349131	40349131	G	A	exonic	TRIT1	NA	synonymous SNV	TRIT1:NM_017646:exon1:c.C33T:p.P11P	exonic	ENSG00000043514	NA	synonymous SNV	ENSG00000043514:ENST00000316891:exon1:c.C33T:p.P11P,ENSG00000043514:ENST00000372818:exon1:c.C33T:p.P11P,ENSG00000043514:ENST00000441669:exon1:c.C33T:p.P11P,ENSG00000043514:ENST00000462797:exon1:c.C33T:p.P11P,ENSG00000043514:ENST00000489945:exon1:c.C33T:p.P11P,ENSG00000043514:ENST00000495175:exon1:c.C33T:p.P11P,ENSG00000043514:ENST00000544981:exon1:c.C33T:p.P11P	NA	NA	1p34.2	NA	Name=c-Myc,CCNT2,Max,NFKB,HEY1,ELF1_(SC-631),PAX5-C20,Nrf1,TBP,SREBP1,TAF1,Pol2(b),HMGN3,Mxi1_(bHLH),Pol2,YY1,Pol2(phosphoS2),Ini1,YY1_(C-20),Pol2-4H8,E2F6,ZNF263	Name=148	NA	rs3845570	0.5	0.5	0.466	0.508586	0.3946	0.5933	0.4107	0.6157	0.4632	0.4	0.58	0.44	0.62	0.4452	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.195462	NA	NA	0.392998	0.566954	ID=COSM426251;OCCURENCE=2(breast)	0.486	NA	6.4338686
1009	7	142510446	142510446	G	A	intergenic	PRSS3P2,EPHB6	dist=28047;dist=42346	NA	NA	exonic	ENSG00000237254	NA	stopgain	ENSG00000237254:ENST00000417977:exon2:c.C160T:p.R54X	Score=391;Name=lod=52	NA	7q34	NA	Name=Pol2,GATA-1	NA	NA	rs17267	0.17	0.17	0.149	0.14357	0.2624	0.1121	0.2176	0.0469	0.1319	0.27	0.11	0.23	0.04	0.2352	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.736147	3.736147	1	0.23599	0.069366	NA	0.123	NA	6.4330767
1009	3	52551010	52551010	C	T	exonic	STAB1	NA	synonymous SNV	STAB1:NM_015136:exon42:c.C4374T:p.P1458P	exonic	ENSG00000010327	NA	synonymous SNV	ENSG00000010327:ENST00000321725:exon42:c.C4374T:p.P1458P	Score=378;Name=lod=46	NA	3p21.1	NA	NA	NA	NA	rs79979130	0.05	0.05	0.037	0.04373	0.0905	0.0228	0.0893	0.0129	0.0266	0.09	0.02	0.1	0.01	0.064	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.127117	NA	NA	0.079921	0.019065	ID=COSM1328126;OCCURENCE=1(ovary)	0.101	NA	6.4322456
1009	6	166736362	166736362	C	T	exonic	SFT2D1	NA	synonymous SNV	SFT2D1:NM_145169:exon7:c.G423A:p.S141S	exonic	ENSG00000198818	NA	synonymous SNV	ENSG00000198818:ENST00000361731:exon7:c.G423A:p.S141S	Score=403;Name=lod=58	NA	6q27	Score=867;Name=V$GRE_C	NA	NA	NA	rs7088	0.45	0.45	0.424	0.472244	0.3996	0.6161	0.4784	0.3283	0.589	0.4	0.6	0.47	0.34	0.4402	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.759653	NA	NA	0.397093	0.321607	NA	0.326	NA	6.4297736
1009	7	34851393	34851393	C	G	exonic	NPSR1	NA	synonymous SNV	NPSR1:NM_207172:exon4:c.C396G:p.L132L,NPSR1:NM_207173:exon4:c.C396G:p.L132L	exonic	ENSG00000187258	NA	nonsynonymous SNV	ENSG00000187258:ENST00000381544:exon3:c.C292G:p.L98V	Score=600;Name=lod=365	NA	7p14.3	NA	NA	NA	NA	rs9655357	0.18	0.18	0.165	0.148562	0.2068	0.3165	0.1556	0.0113	0.0961	0.2	0.32	0.15	0.01	0.1789	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.2259	3.2259	0	0.184767	0.04562	NA	0.145	NA	6.429533
1009	2	128522383	128522383	T	C	exonic	WDR33	NA	synonymous SNV	WDR33:NM_001006622:exon6:c.A645G:p.P215P	exonic	ENSG00000136709	NA	synonymous SNV	ENSG00000136709:ENST00000409658:exon6:c.A645G:p.P215P	Score=856;Name=lod=4023	NA	2q14.3	NA	NA	NA	NA	rs11557685	0.05	0.05	0.055	0.0569089	0.0716	0.0427	0.049	0.0575	0.0613	0.07	0.02	0.04	0.06	0.0753	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.200515	NA	NA	0.090349	0.067408	NA	0.065	NA	6.4294176
1009	1	227172290	227172290	C	T	exonic	ADCK3	NA	synonymous SNV	ADCK3:NM_020247:exon12:c.C1440T:p.F480F	exonic	ENSG00000163050	NA	synonymous SNV	ENSG00000163050:ENST00000433743:exon8:c.C462T:p.F154F,ENSG00000163050:ENST00000458507:exon9:c.C603T:p.F201F,ENSG00000163050:ENST00000366775:exon12:c.C975T:p.F325F,ENSG00000163050:ENST00000366776:exon12:c.C1215T:p.F405F,ENSG00000163050:ENST00000366777:exon12:c.C1440T:p.F480F,ENSG00000163050:ENST00000366778:exon12:c.C1284T:p.F428F,ENSG00000163050:ENST00000366779:exon17:c.C1440T:p.F480F	Score=578;Name=lod=298	NA	1q42.13	NA	NA	NA	NA	rs12593	0.28	0.28	0.289	0.238618	0.4274	0.1716	0.2695	0.1649	0.1912	0.43	0.17	0.3	0.18	0.3525	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.300398	1.300398	NA	0.458023	0.209033	ID=COSM146800,COSM146801;OCCURENCE=1(stomach),1(large_intestine)	0.348	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116235.2;CLNDSDB=.;CLNDSDBID=.	6.4287436
1009	14	56096731	56096731	A	G	exonic	KTN1	NA	synonymous SNV	KTN1:NM_001079521:exon7:c.A1137G:p.R379R,KTN1:NM_004986:exon7:c.A1137G:p.R379R,KTN1:NM_001079522:exon8:c.A1137G:p.R379R,KTN1:NM_001271014:exon8:c.A1137G:p.R379R	exonic	ENSG00000126777	NA	synonymous SNV	ENSG00000126777:ENST00000416613:exon6:c.A1137G:p.R379R,ENSG00000126777:ENST00000395309:exon7:c.A1137G:p.R379R,ENSG00000126777:ENST00000395311:exon7:c.A1137G:p.R379R,ENSG00000126777:ENST00000395314:exon7:c.A1137G:p.R379R,ENSG00000126777:ENST00000413890:exon7:c.A1137G:p.R379R,ENSG00000126777:ENST00000438792:exon7:c.A1137G:p.R379R,ENSG00000126777:ENST00000395308:exon8:c.A1137G:p.R379R,ENSG00000126777:ENST00000459737:exon8:c.A1137G:p.R379R	Score=647;Name=lod=566	NA	14q22.3	NA	NA	NA	NA	rs2274075	0.05	0.05	0.044	0.0609026	0.0626	0.0159	0.072	0.0484	0.1145	0.07	0.01	0.07	0.05	0.0773	0.098	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.16221	NA	NA	0.098256	0.060372	NA	0.022	NA	6.4285106
1009	6	36275458	36275458	T	C	exonic	PNPLA1	NA	nonsynonymous SNV	PNPLA1:NM_001145716:exon8:c.T1306C:p.S436P,PNPLA1:NM_001145717:exon8:c.T1564C:p.S522P,PNPLA1:NM_173676:exon8:c.T1279C:p.S427P	exonic	ENSG00000180316	NA	nonsynonymous SNV	ENSG00000180316:ENST00000312917:exon8:c.T1306C:p.S436P,ENSG00000180316:ENST00000388715:exon8:c.T1279C:p.S427P,ENSG00000180316:ENST00000394571:exon8:c.T1564C:p.S522P,ENSG00000180316:ENST00000457797:exon8:c.T1567C:p.S523P	NA	NA	6p21.31	NA	NA	NA	NA	rs4713956	0.64	0.64	0.639	0.648363	0.6352	0.6091	0.6643	0.7375	0.5706	0.62	0.56	0.67	0.73	0.6402	0.73	1	T	0.0	B	0.0	B	0.829	N	1.000	P	-0.975	N	1.97	T	-0.949	T	0.005	T	0.057	-1.018	0.235	2.53	-0.019	0.419	2.766	-1.01769	NA	NA	0.629651	0.721743	NA	0.645	NA	6.4282824
1009	9	36169494	36169494	G	A	UTR5	CCIN	NM_005893:c.-6G>A	NA	NA	UTR5	ENSG00000185972	ENST00000335119:c.-6G>A	NA	NA	Score=445;Name=lod=86	NA	9p13.3	Score=843;Name=V$FAC1_01	Name=eGFP-JunD	NA	NA	rs3739610	0.34	0.34	0.363	0.383187	0.2942	0.4484	0.1945	0.4334	0.4734	0.3	0.4	0.21	0.45	0.3118	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.179995	NA	NA	0.299186	0.408761	ID=COSN168540;OCCURENCE=1(large_intestine)	0.355	NA	6.4281474
1009	14	69704553	69704553	G	T	exonic	EXD2	NA	nonsynonymous SNV	EXD2:NM_018199:exon7:c.G1179T:p.Q393H,EXD2:NM_001193361:exon8:c.G1554T:p.Q518H,EXD2:NM_001193363:exon8:c.G1554T:p.Q518H,EXD2:NM_001193360:exon9:c.G1554T:p.Q518H,EXD2:NM_001193362:exon9:c.G1554T:p.Q518H	exonic	ENSG00000081177	NA	nonsynonymous SNV	ENSG00000081177:ENST00000409675:exon7:c.G1179T:p.Q393H,ENSG00000081177:ENST00000449989:exon7:c.G1179T:p.Q393H,ENSG00000081177:ENST00000312994:exon8:c.G1554T:p.Q518H,ENSG00000081177:ENST00000409018:exon8:c.G1554T:p.Q518H,ENSG00000081177:ENST00000409242:exon8:c.G1179T:p.Q393H,ENSG00000081177:ENST00000409949:exon9:c.G1179T:p.Q393H,ENSG00000081177:ENST00000409014:exon10:c.G1179T:p.Q393H	NA	NA	14q24.1	NA	NA	NA	NA	rs8007859	0.77	0.77	0.761	0.804313	0.5944	0.9345	0.7839	0.8464	0.8436	0.6	0.93	0.75	0.87	0.7023	0.93	0.25	T	0.0	B	0.001	B	0.875	N	1.000	P	0.145	N	0.35	T	-0.985	T	0.000	T	0.047	0.698	7.725	-2.07	-0.528	0.027	10.938	0.697921	NA	0.29	0.609302	0.834317	NA	0.746	NA	6.4273314
1009	1	110201809	110201809	G	T	intronic	GSTM4	NA	NA	NA	exonic	ENSG00000168765	NA	nonsynonymous SNV	ENSG00000168765:ENST00000369833:exon5:c.G521T:p.S174I	NA	NA	1p13.3	NA	Name=c-Jun,p300_(N-15)	Name=21	NA	rs562996	0.86	0.86	0.903	0.874002	0.8598	0.9692	0.8963	0.8177	0.8507	0.85	0.92	0.87	0.78	0.8799	0.92	.	.	.	.	.	.	.	.	1.000	P	.	.	3.6	T	-0.882	T	0.006	T	0.027	0.67	7.588	1.25	0.226	-0.139	8.120	0.670133	NA	0.26	NA	NA	NA	0.768	NA	6.4269667
1009	17	66539847	66539847	C	T	exonic	FAM20A	NA	synonymous SNV	FAM20A:NM_017565:exon5:c.G735A:p.E245E,FAM20A:NM_001243746:exon6:c.G321A:p.E107E	exonic	ENSG00000108950,ENSG00000269657	NA	nonsynonymous SNV	ENSG00000269657:ENST00000600820:exon1:c.C106T:p.L36F	Score=387;Name=lod=50	NA	17q24.2	NA	NA	NA	NA	rs2286562	0.24	0.24	0.214	0.234026	0.1819	0.4534	0.3372	0.0764	0.2014	0.18	0.42	0.31	0.08	0.2079	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.570518	NA	0.03	0.183372	0.097594	ID=COSM148324;OCCURENCE=1(stomach)	0.21	NA	6.426828
1009	1	85741921	85741921	G	C	intronic	BCL10	NA	NA	NA	intronic	ENSG00000142867	NA	NA	NA	Score=259;Name=lod=15	NA	1p22.3	Score=823;Name=V$IRF2_01	Name=TBP,ELF1_(SC-631),Pol2,PU.1,Ini1,Egr-1,ZNF263,TAF1	Name=37	NA	rs2735594	0.78	0.78	0.774	0.770567	0.7913	0.7173	0.6873	0.8442	0.7638	0.8	0.73	0.74	0.83	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.035293	2.035293	NA	0.781898	0.842486	NA	0.833	NA	6.426802
1009	1	180897569	180897569	C	T	exonic	KIAA1614	NA	synonymous SNV	KIAA1614:NM_020950:exon4:c.C1065T:p.T355T	exonic	ENSG00000135835	NA	synonymous SNV	ENSG00000135835:ENST00000367588:exon4:c.C1065T:p.T355T	Score=407;Name=lod=60	NA	1q25.3	NA	NA	Name=19	NA	rs3747958	0.41	0.41	0.401	0.389976	0.4135	0.5516	0.4063	0.2731	0.3456	0.41	0.52	0.38	0.31	0.4171	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.313839	1.313839	NA	0.409373	0.280079	NA	0.304	NA	6.4266936
1009	2	85824084	85824084	G	C	intronic	RNF181	NA	NA	NA	exonic	ENSG00000168894	NA	unknown	UNKNOWN	NA	NA	2p11.2	NA	NA	NA	NA	rs2232748	0.47	0.47	0.494	0.477636	0.3618	0.38	0.3228	0.8404	0.317	0.34	0.38	0.38	0.84	0.3671	0.84	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-1.039	T	0.000	T	.	-0.723	0.9	3.49	0.217	-1.004	5.1	-0.722528	NA	NA	0.344651	0.744666	NA	0.493	NA	6.426449
1009	7	138486096	138486096	G	C	exonic	TMEM213	NA	nonsynonymous SNV	TMEM213:NM_001085429:exon2:c.G107C:p.S36T	exonic	ENSG00000214128	NA	nonsynonymous SNV	ENSG00000214128:ENST00000397602:exon2:c.G104C:p.S35T,ENSG00000214128:ENST00000413208:exon2:c.G107C:p.S36T,ENSG00000214128:ENST00000422794:exon2:c.G257C:p.S86T,ENSG00000214128:ENST00000442682:exon2:c.G107C:p.S36T	NA	NA	7q34	NA	NA	NA	NA	rs61729750	0.68	0.68	0.705	0.671126	0.6282	0.6925	0.6643	0.7421	0.6022	0.63	0.69	0.65	0.75	0.6506	0.75	1	T	0.0	B	0.0	B	0.472	N	1.000	P	-0.895	N	.	.	-0.954	T	0.000	T	0.042	-2.687	0	2.16	0.075	0.358	4.426	-2.686823	NA	0.42	0.628668	0.72321	NA	0.79	NA	6.4258654
1009	4	3231661	3231661	G	A	exonic	HTT	NA	synonymous SNV	HTT:NM_002111:exon60:c.G8157A:p.L2719L	exonic	ENSG00000197386	NA	synonymous SNV	ENSG00000197386:ENST00000355072:exon60:c.G8157A:p.L2719L	Score=508;Name=lod=155	NA	4p16.3	NA	NA	NA	NA	rs2276881	0.14	0.14	0.12	0.144569	0.0636	0.3621	0.1859	0.0045	0.1636	0.06	0.34	0.15	0.01	0.1074	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.178914	NA	NA	0.070495	0.013272	NA	0.101	NA	6.4251716
1010	1	161094190	161094190	A	G	exonic	DEDD	NA	synonymous SNV	DEDD:NM_001039711:exon2:c.T63C:p.H21H,DEDD:NM_001039712:exon3:c.T63C:p.H21H,DEDD:NM_032998:exon3:c.T63C:p.H21H	exonic	ENSG00000158796	NA	synonymous SNV	ENSG00000158796:ENST00000368005:exon2:c.T63C:p.H21H,ENSG00000158796:ENST00000545495:exon2:c.T63C:p.H21H,ENSG00000158796:ENST00000368006:exon3:c.T63C:p.H21H,ENSG00000158796:ENST00000392188:exon3:c.T63C:p.H21H,ENSG00000158796:ENST00000458050:exon3:c.T63C:p.H21H	Score=595;Name=lod=348	NA	1q23.3	NA	NA	NA	NA	rs1135783	0.07	0.07	0.08	0.0928514	0.0746	0.0675	0.0663	0.1067	0.138	0.07	0.06	0.06	0.1	0.0883	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.698276	NA	0.01	0.079186	0.115751	NA	0.051	NA	6.4245806
1010	11	28057957	28057957	T	C	exonic	KIF18A	NA	nonsynonymous SNV	KIF18A:NM_031217:exon14:c.A2203G:p.I735V	exonic	ENSG00000121621	NA	nonsynonymous SNV	ENSG00000121621:ENST00000263181:exon14:c.A2203G:p.I735V	NA	NA	11p14.1	NA	NA	NA	NA	rs10458896	0.4	0.4	0.417	0.397364	0.2962	0.4762	0.2046	0.6384	0.2311	0.28	0.46	0.24	0.62	0.3212	0.62	0.78	T	0.0	B	0.0	B	0.323	N	1.000	P	1.245	L	-0.49	T	-0.955	T	0.000	T	0.022	-1.917	0.008	0.187	-0.144	-0.358	8.379	-1.916505	NA	1	0.291647	0.597411	NA	0.435	NA	6.4242864
1010	13	114524056	114524056	C	T	ncRNA_intronic	GAS6-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000233695	NA	NA	NA	NA	NA	13q34	NA	Name=GR,E2F6_(H-50),USF1_(SC-8983)	Name=43	NA	rs7319527	0.23	0.23	0.251	0.241214	0.2425	0.0069	0.2003	0.5136	0.1421	0.23	0.01	0.23	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.790194	NA	NA	NA	NA	NA	0.355	NA	6.4241666
1010	17	5264916	5264916	C	T	exonic	RABEP1	NA	synonymous SNV	RABEP1:NM_001083585:exon9:c.C1509T:p.S503S,RABEP1:NM_004703:exon9:c.C1509T:p.S503S	exonic	ENSG00000029725	NA	synonymous SNV	ENSG00000029725:ENST00000574568:exon3:c.C570T:p.S190S,ENSG00000029725:ENST00000537505:exon8:c.C1380T:p.S460S,ENSG00000029725:ENST00000262477:exon9:c.C1509T:p.S503S,ENSG00000029725:ENST00000341923:exon9:c.C1509T:p.S503S,ENSG00000029725:ENST00000408982:exon9:c.C1509T:p.S503S,ENSG00000029725:ENST00000546142:exon9:c.C1509T:p.S503S	Score=519;Name=lod=171	NA	17p13.2	NA	NA	NA	NA	rs34594998	0.08	0.08	0.093	0.095647	0.0805	NA	0.0432	0.2458	0.044	0.09	NA	0.04	0.2	0.0816	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.618739	1.618739	NA	0.081133	0.208092	NA	0.159	NA	6.4234336
1010	6	31170514	31170514	A	G	ncRNA_exonic	HCG27	NA	NA	NA	exonic	ENSG00000206344	NA	unknown	UNKNOWN	NA	NA	6p21.33	NA	Name=SRF	Name=30	NA	rs9263870	0.12	0.12	0.119	0.1252	0.1531	0.0942	0.1772	0.1112	0.1104	0.14	0.09	0.19	0.09	0.1379	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.261743	NA	NA	0.119459	0.090731	NA	0.094	NA	6.4228743
1010	15	78219278	78219278	C	T	upstream	LOC645752	NA	NA	NA	upstream	ENSG00000260776	NA	NA	NA	NA	NA	15q24.3	Score=951;Name=V$NFY_Q6	Name=Pol2,TCF4,TBP	Name=33	NA	rs9920783	0.14	0.14	0.144	0.105631	0.2445	0.0526	0.1023	0.0575	0.0849	0.26	0.06	0.11	0.08	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.143646	NA	NA	NA	NA	NA	0.065	NA	6.4221666
1010	19	53352359	53352359	A	G	exonic	ZNF468	NA	synonymous SNV	ZNF468:NM_001008801:exon3:c.T123C:p.Y41Y,ZNF468:NM_001277120:exon3:c.T123C:p.Y41Y	exonic	ENSG00000204604	NA	synonymous SNV	ENSG00000204604:ENST00000601847:exon1:c.T15C:p.Y5Y,ENSG00000204604:ENST00000243639:exon3:c.T123C:p.Y41Y,ENSG00000204604:ENST00000595646:exon3:c.T123C:p.Y41Y,ENSG00000204604:ENST00000597924:exon3:c.T123C:p.Y41Y	Score=369;Name=lod=42	NA	19q13.41	NA	NA	NA	NA	rs12462241	0.07	0.07	0.07	0.0902556	0.0805	0.0486	0.1023	0.1074	0.1115	0.08	0.05	0.08	0.08	0.0857	0.099	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.176934	NA	NA	0.078372	0.098956	NA	0.138	NA	6.4220946
1010	5	141309265	141309265	C	T	exonic	KIAA0141	NA	synonymous SNV	KIAA0141:NM_001142603:exon5:c.C531T:p.N177N,KIAA0141:NM_014773:exon5:c.C531T:p.N177N	exonic	ENSG00000081791	NA	synonymous SNV	ENSG00000081791:ENST00000194118:exon5:c.C531T:p.N177N,ENSG00000081791:ENST00000432126:exon5:c.C531T:p.N177N,ENSG00000081791:ENST00000508751:exon5:c.C531T:p.N177N	Score=251;Name=lod=14	NA	5q31.3	NA	NA	NA	NA	rs10078802	0.05	0.05	0.048	0.0607029	0.0855	0.0099	0.0447	0.0333	0.136	0.08	0.01	0.06	0.04	0.0757	0.084	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.020141	2.020141	NA	0.083488	0.044031	NA	0.051	NA	6.4219786
1010	19	7712277	7712277	A	G	exonic	STXBP2	NA	nonsynonymous SNV	STXBP2:NM_001127396:exon18:c.A1567G:p.I523V,STXBP2:NM_001272034:exon18:c.A1609G:p.I537V,STXBP2:NM_006949:exon18:c.A1576G:p.I526V	exonic	ENSG00000076944	NA	nonsynonymous SNV	ENSG00000076944:ENST00000602355:exon3:c.A181G:p.I61V,ENSG00000076944:ENST00000221283:exon18:c.A1576G:p.I526V,ENSG00000076944:ENST00000414284:exon18:c.A1567G:p.I523V,ENSG00000076944:ENST00000441779:exon18:c.A1609G:p.I537V	NA	NA	19p13.2	Score=766;Name=V$PAX5_02	NA	NA	NA	rs6791	0.74	0.74	0.733	0.70607	0.664	0.8185	0.6859	0.8071	0.5112	0.67	0.84	0.65	0.79	0.6352	0.84	0.68	T	0.0	B	0.0	B	0.412	N	1.000	P	-1.445	N	-0.99	T	-0.992	T	0.000	T	0.025	-1.105	0.138	-0.767	-0.523	-0.176	6.846	-1.105234	NA	0.5	0.61229	0.774693	ID=COSM440643;OCCURENCE=1(breast)	0.783	NA	6.4218434
1010	15	74032783	74032783	A	G	exonic	C15orf59	NA	synonymous SNV	C15orf59:NM_001039614:exon2:c.T357C:p.S119S	exonic	ENSG00000205363	NA	synonymous SNV	ENSG00000205363:ENST00000379822:exon2:c.T357C:p.S119S,ENSG00000205363:ENST00000559817:exon3:c.T273C:p.S91S,ENSG00000205363:ENST00000569673:exon3:c.T357C:p.S119S	Score=443;Name=lod=84	NA	15q24.1	Score=747;Name=V$STAT3_01	NA	NA	NA	rs28594180	0.42	0.42	0.407	0.448083	0.4056	0.5853	0.4669	0.2761	0.5695	0.39	0.57	0.44	0.3	0.4359	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.299109	1.299109	NA	0.404213	0.306187	ID=COSM434259;OCCURENCE=1(breast)	0.406	NA	6.4209536
1010	8	72975801	72975801	T	G	exonic	TRPA1	NA	nonsynonymous SNV	TRPA1:NM_007332:exon5:c.A558C:p.K186N	exonic	ENSG00000104321	NA	nonsynonymous SNV	ENSG00000104321:ENST00000523582:exon2:c.A114C:p.K38N,ENSG00000104321:ENST00000262209:exon5:c.A558C:p.K186N	NA	NA	8q13.3	NA	NA	NA	NA	rs7819749	0.82	0.82	0.807	0.827676	0.6074	0.9752	0.7695	0.9705	0.7505	0.62	0.99	0.75	0.96	0.7037	0.99	0.42	T	0.0	B	0.001	B	0.126	N	1.000	P	0.43	N	-0.14	T	-0.975	T	0.000	T	0.021	2.195	13.3	-11.2	-2.413	-0.526	5.412	2.195311	2.195311	0.63	0.60186	0.917385	NA	0.783	NA	6.4203734
1010	6	30228230	30228230	A	C	ncRNA_exonic	HLA-L	NA	NA	NA	ncRNA_exonic	ENSG00000243753	NA	NA	NA	Score=304;Name=lod=23	NA	6p22.1	NA	NA	Name=8	NA	rs2516710	0.34	0.34	0.294	0.397564	0.2465	0.5308	0.4496	0.3003	0.5102	0.22	0.48	0.4	0.3	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.741997	1.741997	NA	NA	NA	NA	0.384	NA	6.4201666
1010	19	41263403	41263403	A	G	exonic	SNRPA	NA	synonymous SNV	SNRPA:NM_004596:exon2:c.A240G:p.K80K	exonic	ENSG00000077312	NA	synonymous SNV	ENSG00000077312:ENST00000243563:exon2:c.A240G:p.K80K,ENSG00000077312:ENST00000600456:exon2:c.A240G:p.K80K,ENSG00000077312:ENST00000601545:exon2:c.A90G:p.K30K,ENSG00000077312:ENST00000597353:exon3:c.A240G:p.K80K,ENSG00000077312:ENST00000599362:exon3:c.A240G:p.K80K,ENSG00000077312:ENST00000601253:exon3:c.A240G:p.K80K	Score=525;Name=lod=181	NA	19q13.2	NA	NA	NA	NA	rs2230694	0.21	0.21	0.211	0.185703	0.0726	0.2073	0.0778	0.4077	0.0562	0.07	0.23	0.1	0.45	0.1058	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.474892	NA	NA	0.068256	0.327508	NA	0.159	NA	6.4200106
1010	7	2611878	2611878	T	C	exonic	IQCE	NA	synonymous SNV	IQCE:NM_001100390:exon4:c.T264C:p.T88T,IQCE:NM_152558:exon5:c.T312C:p.T104T	exonic	ENSG00000106012	NA	synonymous SNV	ENSG00000106012:ENST00000325979:exon3:c.T117C:p.T39T,ENSG00000106012:ENST00000325997:exon3:c.T117C:p.T39T,ENSG00000106012:ENST00000423395:exon3:c.T117C:p.T39T,ENSG00000106012:ENST00000404984:exon4:c.T159C:p.T53T,ENSG00000106012:ENST00000422276:exon4:c.T117C:p.T39T,ENSG00000106012:ENST00000438376:exon4:c.T264C:p.T88T,ENSG00000106012:ENST00000402050:exon5:c.T312C:p.T104T,ENSG00000106012:ENST00000415271:exon5:c.T312C:p.T104T	Score=309;Name=lod=24	NA	7p22.3	NA	Name=ELF1_(SC-631)	Name=74	NA	rs2917751	0.66	0.66	0.636	0.661342	0.7604	0.5159	0.6931	0.6301	0.729	0.77	0.52	0.68	0.66	0.7299	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.821277	NA	NA	0.75664	0.653277	NA	0.681	NA	6.4197266
1010	3	12829036	12829036	C	T	intergenic	TMEM40,CAND2	dist=28228;dist=9135	NA	NA	ncRNA_exonic	ENSG00000213943	NA	NA	NA	Score=537;Name=lod=203	NA	3p25.2	NA	Name=Rad21,CTCF_(C-20),CTCF,NRSF,CTCF_(SC-5916),SMC3_(ab9263)	Name=38	NA	rs9881832	0.41	0.41	0.411	0.365815	0.5815	0.3323	0.402	0.2943	0.2495	0.57	0.3	0.39	0.31	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.747075	NA	NA	NA	NA	NA	0.21	NA	6.4185
1010	22	38122448	38122448	C	T	exonic	TRIOBP	NA	synonymous SNV	TRIOBP:NM_001039141:exon7:c.C3885T:p.S1295S	exonic	ENSG00000100106	NA	synonymous SNV	ENSG00000100106:ENST00000406386:exon7:c.C3885T:p.S1295S	Score=448;Name=lod=88	NA	22q13.1	Score=853;Name=V$PAX5_01	NA	NA	NA	rs739137	0.38	0.38	0.342	0.336661	0.3877	0.5863	0.2867	0.1543	0.3088	0.39	0.58	0.31	0.17	0.4421	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.381256	1.381256	NA	0.419597	0.177437	NA	0.283	NA	6.4172696
1010	1	179520422	179520422	T	C	exonic	NPHS2	NA	synonymous SNV	NPHS2:NM_014625:exon8:c.A1038G:p.L346L	exonic	ENSG00000116218	NA	synonymous SNV	ENSG00000116218:ENST00000367616:exon7:c.A834G:p.L278L,ENSG00000116218:ENST00000367615:exon8:c.A1038G:p.L346L	NA	NA	1q25.2	NA	Name=PAX5-C20	NA	NA	rs3818587	0.08	0.08	0.071	0.0710863	0.0865	0.0942	0.0519	0.0946	0.0133	0.09	0.08	0.05	0.08	0.0737	0.098	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.438488	NA	NA	0.089535	0.08965	NA	0.08	NA	6.4169316
1010	7	138596001	138596001	G	A	exonic	KIAA1549	NA	synonymous SNV	KIAA1549:NM_001164665:exon4:c.C3036T:p.S1012S,KIAA1549:NM_020910:exon4:c.C3036T:p.S1012S	exonic	ENSG00000122778	NA	synonymous SNV	ENSG00000122778:ENST00000242365:exon3:c.C2886T:p.S962S,ENSG00000122778:ENST00000422774:exon4:c.C3036T:p.S1012S,ENSG00000122778:ENST00000440172:exon4:c.C3036T:p.S1012S	NA	NA	7q34	Score=774;Name=V$TAXCREB_02	NA	NA	NA	rs16873582	0.07	0.07	0.081	0.0826677	0.0676	0.0575	0.0519	0.143	0.0644	0.06	0.05	0.05	0.11	0.1041	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.604729	NA	NA	0.079274	0.125067	NA	0.043	NA	6.4156926
1010	11	118769442	118769442	A	G	exonic	BCL9L	NA	synonymous SNV	BCL9L:NM_182557:exon8:c.T4182C:p.P1394P	exonic	ENSG00000186174	NA	synonymous SNV	ENSG00000186174:ENST00000334801:exon8:c.T4182C:p.P1394P	NA	NA	11q23.3	Score=914;Name=V$TAL1BETAITF2_01	Name=Pol2	NA	NA	rs7104819	0.46	0.46	0.438	0.444089	0.4135	0.2927	0.5476	0.6906	0.2249	0.42	0.29	0.52	0.66	0.4246	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.15912	NA	NA	0.413211	0.627843	NA	0.355	NA	6.4153556
1011	8	145139727	145139727	C	T	exonic	GPAA1	NA	synonymous SNV	GPAA1:NM_003801:exon8:c.C1113T:p.I371I	exonic	ENSG00000197858	NA	synonymous SNV	ENSG00000197858:ENST00000361036:exon7:c.C933T:p.I311I,ENSG00000197858:ENST00000355091:exon8:c.C1113T:p.I371I	Score=541;Name=lod=211	NA	8q24.3	NA	NA	NA	NA	rs4977165	0.12	0.12	0.123	0.123003	0.0885	0.001	0.0648	0.3404	0.0317	0.09	0.0017	0.07	0.32	0.0842	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.948337	NA	NA	0.079268	0.302	NA	0.123	NA	6.4146986
1011	17	16722281	16722281	G	A	intergenic	USP32P1,KRT16P2	dist=14462;dist=11516	NA	NA	ncRNA_exonic	ENSG00000226145	NA	NA	NA	Score=663;Name=lod=657	NA	17p11.2	Score=856;Name=V$CMYB_01	Name=CTCFL_(SC-98982),CTCF	NA	NA	rs6502520	0.71	0.71	0.686	0.730631	0.5855	0.9534	0.6772	0.7284	0.6912	0.59	0.96	0.67	0.61	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.124924	NA	NA	NA	NA	NA	0.565	NA	6.4145
1011	16	21531111	21531111	T	C	ncRNA_exonic	SLC7A5P2	NA	NA	NA	ncRNA_intronic	ENSG00000180747	NA	NA	NA	NA	NA	16p12.2	NA	Name=Pol2	Name=11	NA	rs7197243	0.1	0.1	0.076	NA	NA	NA	NA	NA	NA	0.18	0.02	0.16	0.01	0.253	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.051766	NA	NA	NA	NA	NA	0.159	NA	6.4136666
1011	3	46723551	46723551	G	A	exonic	ALS2CL	NA	synonymous SNV	ALS2CL:NM_001190707:exon11:c.C1143T:p.H381H,ALS2CL:NM_147129:exon11:c.C1143T:p.H381H	exonic	ENSG00000178038	NA	synonymous SNV	ENSG00000178038:ENST00000318962:exon11:c.C1143T:p.H381H,ENSG00000178038:ENST00000415953:exon11:c.C1143T:p.H381H,ENSG00000178038:ENST00000431015:exon11:c.C1143T:p.H381H,ENSG00000178038:ENST00000434140:exon11:c.C1143T:p.H381H,ENSG00000178038:ENST00000450172:exon11:c.C1143T:p.H381H	Score=439;Name=lod=81	NA	3p21.31	Score=856;Name=V$ARNT_01	NA	NA	NA	rs4683310	0.33	0.33	0.288	0.313099	0.4205	0.3383	0.4063	0.0968	0.4029	0.42	0.33	0.41	0.12	0.4006	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.434999	NA	NA	0.432326	0.163187	NA	0.254	NA	6.4132406
1011	3	75986717	75986717	G	A	intergenic	ZNF717,ROBO2	dist=152462;dist=1102577	NA	NA	exonic	ENSG00000185008	NA	nonsynonymous SNV	ENSG00000185008:ENST00000487694:exon2:c.G73A:p.V25M,ENSG00000185008:ENST00000602589:exon2:c.G73A:p.V25M	NA	NA	3p12.3	NA	NA	NA	NA	rs2971727	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4201	NA	0.18	T	.	.	.	.	.	.	1.000	N	-0.345	N	-0.1	T	-0.988	T	0.089	T	0.058	-0.164	3.198	2.0	0.283	0.294	4.484	-0.164376	NA	0.03	NA	NA	NA	NA	NA	6.4132334
1011	4	3319553	3319553	C	T	exonic	RGS12	NA	synonymous SNV	RGS12:NM_002926:exon2:c.C1656T:p.S552S,RGS12:NM_198229:exon2:c.C1656T:p.S552S	exonic	ENSG00000159788	NA	synonymous SNV	ENSG00000159788:ENST00000382788:exon1:c.C1656T:p.S552S,ENSG00000159788:ENST00000514268:exon1:c.C1656T:p.S552S,ENSG00000159788:ENST00000336727:exon2:c.C1656T:p.S552S,ENSG00000159788:ENST00000344733:exon2:c.C1656T:p.S552S,ENSG00000159788:ENST00000543385:exon2:c.C1656T:p.S552S	Score=536;Name=lod=202	NA	4p16.3	NA	NA	NA	NA	rs2281470	0.15	0.15	0.127	0.158746	0.0686	0.3363	0.1614	0.0575	0.2035	0.07	0.33	0.13	0.05	0.1127	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.244477	NA	NA	0.072907	0.054042	NA	0.094	NA	6.4124596
1011	20	44314609	44314609	A	G	exonic	WFDC10B	NA	nonsynonymous SNV	WFDC10B:NM_172006:exon3:c.T23C:p.L8P	exonic	ENSG00000182931	NA	nonsynonymous SNV	ENSG00000182931:ENST00000330523:exon3:c.T23C:p.L8P	NA	NA	20q13.12	NA	Name=CTCF	NA	NA	rs232729	0.82	0.82	0.814	0.849441	0.6113	0.998	0.7939	0.9697	0.818	0.61	1	0.79	0.96	0.7072	1	1	T	0.0	B	0.0	B	.	.	1.000	P	.	.	1.23	T	-0.967	T	0.000	T	0.151	-1.758	0.01	-0.113	-0.216	-0.403	3.472	-1.757873	NA	0.21	0.602442	0.899228	NA	0.754	NA	6.4123914
1011	5	121355961	121355961	G	A	exonic	SRFBP1	NA	synonymous SNV	SRFBP1:NM_152546:exon6:c.G531A:p.A177A	exonic	ENSG00000151304	NA	synonymous SNV	ENSG00000151304:ENST00000339397:exon6:c.G531A:p.A177A	NA	NA	5q23.1	NA	Name=BATF	NA	NA	rs55708726	0.09	0.09	0.068	NA	NA	NA	NA	NA	NA	0.12	0.03	0.11	0.1	0.1184	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.851045	NA	NA	0.135919	0.088077	NA	0.08	NA	6.4123476
1011	7	133580447	133580447	G	A	exonic	EXOC4	NA	synonymous SNV	EXOC4:NM_021807:exon12:c.G1830A:p.V610V	exonic	ENSG00000131558	NA	synonymous SNV	ENSG00000131558:ENST00000545148:exon4:c.G660A:p.V220V,ENSG00000131558:ENST00000253861:exon12:c.G1830A:p.V610V,ENSG00000131558:ENST00000539845:exon12:c.G1527A:p.V509V	Score=608;Name=lod=395	NA	7q33	NA	NA	NA	Score=55;Name=2252909_0_+_55	rs2042456	0.49	0.49	0.521	0.538139	0.4165	0.4613	0.3184	0.7262	0.6442	0.42	0.5	0.37	0.69	0.4422	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.950947	NA	NA	0.395698	0.650477	NA	0.5	NA	6.4122686
1011	19	9324863	9324863	G	A	exonic	OR7D4	NA	synonymous SNV	OR7D4:NM_001005191:exon1:c.C651T:p.S217S	exonic	ENSG00000174667	NA	synonymous SNV	ENSG00000174667:ENST00000308682:exon1:c.C651T:p.S217S	Score=278;Name=lod=18	NA	19p13.2	NA	NA	NA	NA	rs8109935	0.14	0.14	0.122	0.175719	0.0626	0.0407	0.134	0.3578	0.2147	0.07	0.05	0.14	0.36	0.1132	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.210034	NA	NA	0.078721	0.310486	NA	0.145	NA	6.4121456
1011	15	81598416	81598416	G	A	exonic	IL16	NA	synonymous SNV	IL16:NM_004513:exon5:c.G1485A:p.R495R,IL16:NM_172217:exon16:c.G3588A:p.R1196R,IL16:NM_001172128:exon17:c.G3588A:p.R1196R	exonic	ENSG00000172349	NA	synonymous SNV	ENSG00000172349:ENST00000394652:exon5:c.G1485A:p.R495R,ENSG00000172349:ENST00000302987:exon16:c.G3588A:p.R1196R,ENSG00000172349:ENST00000394660:exon17:c.G3588A:p.R1196R,ENSG00000172349:ENST00000559388:exon19:c.G3450A:p.R1150R	Score=265;Name=lod=16	NA	15q25.1	NA	NA	NA	NA	rs1803275	0.15	0.15	0.153	0.146166	0.0746	0.1637	0.1614	0.2398	0.0644	0.07	0.19	0.14	0.24	0.0967	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.848608	NA	NA	0.083488	0.200182	NA	0.21	NA	6.4118786
1011	11	65348725	65348725	G	A	exonic	EHBP1L1	NA	synonymous SNV	EHBP1L1:NM_001099409:exon8:c.G747A:p.V249V	exonic	ENSG00000173442	NA	synonymous SNV	ENSG00000173442:ENST00000309295:exon8:c.G747A:p.V249V,ENSG00000173442:ENST00000533237:exon8:c.G747A:p.V249V	Score=440;Name=lod=82	NA	11q13.1	NA	NA	NA	NA	rs79021529	0.04	0.04	0.032	0.0355431	0.0924	NA	0.0432	0.0045	0.0501	0.09	NA	0.04	0.01	0.0814	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.926574	NA	NA	0.081426	0.017394	NA	0.007	NA	6.4114406
1011	1	78958491	78958491	C	T	exonic	PTGFR	NA	synonymous SNV	PTGFR:NM_000959:exon2:c.C63T:p.T21T,PTGFR:NM_001039585:exon2:c.C63T:p.T21T	exonic	ENSG00000122420	NA	synonymous SNV	ENSG00000122420:ENST00000370756:exon2:c.C63T:p.T21T,ENSG00000122420:ENST00000370757:exon2:c.C63T:p.T21T,ENSG00000122420:ENST00000497923:exon2:c.C63T:p.T21T,ENSG00000122420:ENST00000370758:exon3:c.C63T:p.T21T	Score=489;Name=lod=129	NA	1p31.1	NA	NA	NA	NA	rs35227129	0.05	0.05	0.039	0.0313498	0.0944	0.001	0.0476	0.0076	0.0184	0.1	NA	0.06	0.01	0.0642	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.749929	NA	NA	0.096628	0.016568	NA	0.109	NA	6.4114386
1011	5	17202498	17202498	T	C	ncRNA_intronic	LOC285696	NA	NA	NA	ncRNA_exonic	ENSG00000250816	NA	NA	NA	Score=659;Name=lod=634	NA	5p15.1	NA	NA	Name=4	NA	rs2956563	0.26	0.26	0.268	0.260982	0.2555	0.1964	0.2738	0.323	0.2403	0.26	0.2	0.26	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.058471	NA	NA	NA	NA	NA	0.355	NA	6.4111666
1011	6	38825329	38825329	C	T	exonic	DNAH8	NA	synonymous SNV	DNAH8:NM_001206927:exon42:c.C5769T:p.H1923H	exonic	ENSG00000124721	NA	synonymous SNV	ENSG00000124721:ENST00000441566:exon38:c.C5118T:p.H1706H,ENSG00000124721:ENST00000359357:exon40:c.C5118T:p.H1706H,ENSG00000124721:ENST00000327475:exon41:c.C5733T:p.H1911H,ENSG00000124721:ENST00000449981:exon42:c.C5769T:p.H1923H	Score=581;Name=lod=307	NA	6p21.2	NA	Name=STAT3	NA	NA	rs2061907	0.49	0.49	0.478	0.484225	0.3767	0.6944	0.6037	0.3555	0.4673	0.38	0.67	0.56	0.39	0.4523	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.725272	NA	NA	0.42686	0.356559	ID=COSM451394,COSM451393;OCCURENCE=1(breast)	0.565	NA	6.4108066
1011	12	15733669	15733669	G	A	exonic	PTPRO	NA	synonymous SNV	PTPRO:NM_030668:exon9:c.G519A:p.G173G,PTPRO:NM_030670:exon9:c.G519A:p.G173G,PTPRO:NM_030669:exon10:c.G603A:p.G201G,PTPRO:NM_030671:exon10:c.G603A:p.G201G,PTPRO:NM_002848:exon21:c.G2952A:p.G984G,PTPRO:NM_030667:exon22:c.G3036A:p.G1012G	exonic	ENSG00000151490	NA	synonymous SNV	ENSG00000151490:ENST00000542557:exon9:c.G519A:p.G173G,ENSG00000151490:ENST00000544244:exon9:c.G519A:p.G173G,ENSG00000151490:ENST00000442921:exon10:c.G603A:p.G201G,ENSG00000151490:ENST00000445537:exon10:c.G603A:p.G201G,ENSG00000151490:ENST00000348962:exon21:c.G2952A:p.G984G,ENSG00000151490:ENST00000281171:exon22:c.G3036A:p.G1012G	NA	NA	12p12.3	NA	Name=CTCF_(C-20),Rad21,CTCF,SMC3_(ab9263)	NA	NA	rs3748299	0.14	0.14	0.138	0.132588	0.0706	0.2986	0.049	0.0681	0.1718	0.06	0.34	0.05	0.07	0.0988	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.816862	NA	NA	0.086628	0.070132	NA	0.138	NA	6.4106386
1011	5	32093070	32093070	G	A	exonic	PDZD2	NA	synonymous SNV	PDZD2:NM_178140:exon20:c.G7785A:p.S2595S	exonic	ENSG00000133401	NA	synonymous SNV	ENSG00000133401:ENST00000282493:exon20:c.G7785A:p.S2595S,ENSG00000133401:ENST00000438447:exon21:c.G7785A:p.S2595S	Score=393;Name=lod=53	NA	5p13.3	NA	NA	NA	NA	rs16889442	0.12	0.12	0.115	0.117212	0.0755	0.2381	0.1398	0.0446	0.1176	0.07	0.26	0.11	0.04	0.0923	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.716053	NA	NA	0.08907	0.054925	NA	0.072	NA	6.4097966
1011	13	20224387	20224387	A	G	exonic	MPHOSPH8	NA	synonymous SNV	MPHOSPH8:NM_017520:exon5:c.A1563G:p.A521A	exonic	ENSG00000196199	NA	synonymous SNV	ENSG00000196199:ENST00000361479:exon5:c.A1563G:p.A521A,ENSG00000196199:ENST00000414242:exon5:c.A1563G:p.A521A	NA	NA	13q12.11	Score=808;Name=V$OCT_C	NA	NA	NA	rs9578176	0.1	0.1	0.098	0.106629	0.0974	0.0754	0.0735	0.1974	0.0491	0.09	0.06	0.06	0.2	0.0844	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.353385	NA	NA	0.075116	0.177712	NA	0.174	NA	6.4097506
1011	8	145060112	145060112	G	A	exonic	PARP10	NA	synonymous SNV	PARP10:NM_032789:exon3:c.C213T:p.H71H	exonic	ENSG00000178685	NA	synonymous SNV	ENSG00000178685:ENST00000525773:exon2:c.C249T:p.H83H,ENSG00000178685:ENST00000313028:exon3:c.C213T:p.H71H,ENSG00000178685:ENST00000524918:exon3:c.C213T:p.H71H,ENSG00000178685:ENST00000527262:exon3:c.C213T:p.H71H,ENSG00000178685:ENST00000525486:exon4:c.C213T:p.H71H,ENSG00000178685:ENST00000525879:exon4:c.C213T:p.H71H,ENSG00000178685:ENST00000528136:exon4:c.C213T:p.H71H,ENSG00000178685:ENST00000528625:exon4:c.C213T:p.H71H,ENSG00000178685:ENST00000528914:exon4:c.C213T:p.H71H,ENSG00000178685:ENST00000529311:exon4:c.C213T:p.H71H,ENSG00000178685:ENST00000529842:exon4:c.C213T:p.H71H,ENSG00000178685:ENST00000530478:exon4:c.C213T:p.H71H,ENSG00000178685:ENST00000531537:exon4:c.C213T:p.H71H,ENSG00000178685:ENST00000531707:exon4:c.C213T:p.H71H,ENSG00000178685:ENST00000532311:exon4:c.C213T:p.H71H	NA	NA	8q24.3	Score=867;Name=V$YY1_01	NA	Name=22	NA	rs11136345	0.38	0.38	0.414	0.391174	0.4314	0.1458	0.2795	0.6165	0.3773	0.42	0.15	0.32	0.62	0.4045	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.211158	NA	NA	0.421126	0.594005	NA	0.449	NA	6.4096406
1011	1	179084080	179084080	T	G	exonic	ABL2	NA	synonymous SNV	ABL2:NM_001136001:exon8:c.A1431C:p.L477L,ABL2:NM_001168236:exon8:c.A1431C:p.L477L,ABL2:NM_001168238:exon8:c.A1431C:p.L477L,ABL2:NM_001168239:exon8:c.A1386C:p.L462L,ABL2:NM_001136000:exon9:c.A1449C:p.L483L,ABL2:NM_001168237:exon9:c.A1494C:p.L498L,ABL2:NM_005158:exon9:c.A1449C:p.L483L,ABL2:NM_007314:exon9:c.A1494C:p.L498L	exonic	ENSG00000143322	NA	synonymous SNV	ENSG00000143322:ENST00000367623:exon8:c.A1431C:p.L477L,ENSG00000143322:ENST00000392043:exon8:c.A1431C:p.L477L,ENSG00000143322:ENST00000408940:exon8:c.A1386C:p.L462L,ENSG00000143322:ENST00000504405:exon8:c.A1386C:p.L462L,ENSG00000143322:ENST00000507173:exon8:c.A1431C:p.L477L,ENSG00000143322:ENST00000344730:exon9:c.A1449C:p.L483L,ENSG00000143322:ENST00000502732:exon9:c.A1494C:p.L498L,ENSG00000143322:ENST00000511413:exon9:c.A1494C:p.L498L,ENSG00000143322:ENST00000512653:exon9:c.A1449C:p.L483L	Score=576;Name=lod=291	NA	1q25.2	NA	NA	NA	NA	rs2274230	0.06	0.06	0.047	0.0443291	0.0964	0.0764	0.0447	0.0076	0.0072	0.1	0.06	0.05	0.01	0.068	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.693357	NA	NA	0.092791	0.024739	NA	0.072	NA	6.4094756
1011	2	85808737	85808737	A	G	exonic	VAMP8	NA	synonymous SNV	VAMP8:NM_003761:exon3:c.A201G:p.R67R	exonic	ENSG00000118640	NA	synonymous SNV	ENSG00000118640:ENST00000263864:exon3:c.A201G:p.R67R,ENSG00000118640:ENST00000432071:exon3:c.A123G:p.R41R	Score=552;Name=lod=234	NA	2p11.2	Score=895;Name=V$HSF1_01	NA	NA	NA	rs1009	0.45	0.45	0.437	0.439497	0.4314	0.3859	0.3473	0.5976	0.3548	0.43	0.38	0.41	0.58	0.4126	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.420714	1.420714	NA	0.413256	0.549932	ID=COSM148886;OCCURENCE=1(stomach)	0.399	NA	6.4094106
1011	11	64981522	64981522	C	A	exonic	SLC22A20	NA	nonsynonymous SNV	SLC22A20:NM_001004326:exon1:c.C179A:p.A60D	ncRNA_exonic	ENSG00000197847	NA	NA	NA	NA	NA	11q13.1	NA	Name=c-Myc,Max,Pol2	Name=8	NA	rs11605576	0.3	0.3	0.297	0.287141	0.3608	0.2629	0.4611	0.1324	0.3221	0.36	0.26	0.41	0.18	0.393	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.151638	NA	0.02	0.337044	0.17429	ID=COSM429596,COSM429597;OCCURENCE=1(breast)	0.312	NA	6.409156
1011	1	38453576	38453576	A	C	intronic	SF3A3	NA	NA	NA	intronic	ENSG00000183431	NA	NA	NA	NA	NA	1p34.3	Score=947;Name=V$FOXO3_01	Name=FOXA1_(C-20),JunD,HDAC2_(SC-6296),c-Jun,FOXA1_(SC-101058),FOXA2_(SC-6554),CEBPB,p300	Name=3	NA	rs10890285	0.36	0.36	0.339	0.369409	0.2893	0.502	0.3775	0.3124	0.3865	0.27	0.47	0.37	0.35	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.947175	1.947175	NA	0.301697	0.315029	NA	0.29	NA	6.409003
1011	7	142749737	142749737	C	T	exonic	OR6V1	NA	synonymous SNV	OR6V1:NM_001001667:exon1:c.C300T:p.Y100Y	exonic	ENSG00000225781	NA	synonymous SNV	ENSG00000225781:ENST00000418316:exon1:c.C300T:p.Y100Y	Score=340;Name=lod=32	NA	7q34	NA	NA	NA	NA	rs17164103	0.14	0.14	0.153	0.137181	0.0815	0.0347	0.0836	0.323	0.0869	0.07	0.04	0.1	0.38	0.0942	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.779637	NA	NA	0.083021	0.264678	NA	0.152	NA	6.4079456
1011	2	48809629	48809629	G	T	exonic	STON1,STON1-GTF2A1L	NA	synonymous SNV	STON1-GTF2A1L:NM_001198594:exon1:c.G1857T:p.V619V,STON1-GTF2A1L:NM_001198593:exon2:c.G1857T:p.V619V,STON1:NM_006873:exon2:c.G1857T:p.V619V,STON1-GTF2A1L:NM_172311:exon2:c.G1857T:p.V619V,STON1:NM_001198595:exon3:c.G1857T:p.V619V	exonic	ENSG00000068781,ENSG00000243244	NA	synonymous SNV	ENSG00000068781:ENST00000309827:exon1:c.G1857T:p.V619V,ENSG00000243244:ENST00000309835:exon1:c.G1857T:p.V619V,ENSG00000068781:ENST00000394751:exon1:c.G1857T:p.V619V,ENSG00000243244:ENST00000444932:exon1:c.G195T:p.V65V,ENSG00000068781:ENST00000394754:exon2:c.G1857T:p.V619V,ENSG00000068781:ENST00000402114:exon2:c.G1857T:p.V619V,ENSG00000243244:ENST00000404752:exon2:c.G1857T:p.V619V,ENSG00000068781:ENST00000405008:exon2:c.G1857T:p.V619V,ENSG00000243244:ENST00000406226:exon3:c.G1857T:p.V619V	Score=616;Name=lod=427	NA	2p16.3	NA	NA	NA	NA	rs17397707	0.05	0.05	0.036	0.0271565	0.1024	NA	0.0375	0.0015	0.0051	0.11	NA	0.05	0.002	0.0662	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.297114	NA	NA	0.091512	0.0202	NA	0.022	NA	6.4065546
1011	1	24406647	24406647	G	A	exonic	MYOM3	NA	synonymous SNV	MYOM3:NM_152372:exon20:c.C2445T:p.A815A	exonic	ENSG00000142661	NA	synonymous SNV	ENSG00000142661:ENST00000329601:exon20:c.C2445T:p.A815A,ENSG00000142661:ENST00000330966:exon20:c.C2448T:p.A816A,ENSG00000142661:ENST00000374434:exon20:c.C2445T:p.A815A	Score=349;Name=lod=35	NA	1p36.11	Score=744;Name=V$NRSF_01	NA	NA	NA	rs4649175	0.39	0.39	0.384	0.354233	0.4423	0.4276	0.3444	0.3238	0.2362	0.45	0.43	0.33	0.29	0.3933	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.115823	NA	NA	0.42473	0.311656	NA	0.304	NA	6.4063366
1011	21	47838123	47838123	A	G	exonic	PCNT	NA	synonymous SNV	PCNT:NM_006031:exon31:c.A6927G:p.K2309K	exonic	ENSG00000160299	NA	synonymous SNV	ENSG00000160299:ENST00000359568:exon31:c.A6927G:p.K2309K	Score=444;Name=lod=85	NA	21q22.3	NA	NA	NA	NA	rs2839246	0.14	0.14	0.143	0.178315	0.0924	0.005	0.0937	0.4856	0.09	0.08	0.0035	0.1	0.43	0.103	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.270907	NA	NA	0.065116	0.399682	NA	0.196	NA	6.4061506
1011	6	84799059	84799059	C	T	exonic	MRAP2	NA	synonymous SNV	MRAP2:NM_138409:exon4:c.C477T:p.N159N	exonic	ENSG00000135324	NA	synonymous SNV	ENSG00000135324:ENST00000257776:exon4:c.C477T:p.N159N	Score=520;Name=lod=173	NA	6q14.2	NA	NA	NA	NA	rs9449776	0.18	0.18	0.191	0.207468	0.0726	0.0099	0.1455	0.5802	0.09	0.07	0.01	0.15	0.57	0.1139	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.972631	NA	NA	0.074186	0.520881	NA	0.225	NA	6.4059806
1011	8	61178574	61178574	T	C	exonic	CA8	NA	synonymous SNV	CA8:NM_004056:exon3:c.A327G:p.E109E	exonic	ENSG00000178538	NA	synonymous SNV	ENSG00000178538:ENST00000317995:exon3:c.A327G:p.E109E	Score=650;Name=lod=582	NA	8q12.1	NA	NA	NA	NA	rs7464181	0.47	0.47	0.494	0.500998	0.4235	0.2669	0.3977	0.8457	0.4294	0.42	0.28	0.41	0.81	0.4279	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.414422	1.414422	NA	0.409651	0.759646	NA	0.58	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116510.2;CLNDSDB=.;CLNDSDBID=.	6.4056156
1011	5	160721319	160721319	G	A	exonic	GABRB2	NA	synonymous SNV	GABRB2:NM_000813:exon10:c.C1194T:p.A398A,GABRB2:NM_021911:exon11:c.C1308T:p.A436A	exonic	ENSG00000145864	NA	synonymous SNV	ENSG00000145864:ENST00000517547:exon7:c.C714T:p.A238A,ENSG00000145864:ENST00000517901:exon9:c.C1005T:p.A335A,ENSG00000145864:ENST00000353437:exon10:c.C1194T:p.A398A,ENSG00000145864:ENST00000393959:exon10:c.C1308T:p.A436A,ENSG00000145864:ENST00000520240:exon10:c.C1194T:p.A398A,ENSG00000145864:ENST00000274547:exon11:c.C1308T:p.A436A	Score=586;Name=lod=321	NA	5q34	NA	NA	NA	NA	rs2229944	0.11	0.11	0.088	0.117812	0.0785	0.0347	0.232	0.1596	0.1063	0.08	0.04	0.19	0.17	0.1059	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.045733	NA	NA	0.076977	0.15025	NA	0.094	NA	6.4052896
1011	19	41009982	41009982	C	T	exonic	SPTBN4	NA	synonymous SNV	SPTBN4:NM_020971:exon12:c.C1608T:p.A536A	exonic	ENSG00000160460	NA	synonymous SNV	ENSG00000160460:ENST00000338932:exon12:c.C1608T:p.A536A,ENSG00000160460:ENST00000344104:exon12:c.C1608T:p.A536A,ENSG00000160460:ENST00000352632:exon12:c.C1608T:p.A536A,ENSG00000160460:ENST00000595535:exon12:c.C1608T:p.A536A,ENSG00000160460:ENST00000598249:exon12:c.C1608T:p.A536A	Score=624;Name=lod=457	NA	19q13.2	NA	NA	NA	NA	rs71358911	0.04	0.04	0.031	0.024361	0.0865	NA	0.0259	0.0061	0.0092	0.09	NA	0.02	0.01	0.0665	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.300589	1.300589	NA	0.108488	0.018157	NA	0.029	NA	6.4051786
1012	8	69020496	69020496	T	C	exonic	PREX2	NA	synonymous SNV	PREX2:NM_024870:exon24:c.T2868C:p.S956S	exonic	ENSG00000046889	NA	synonymous SNV	ENSG00000046889:ENST00000288368:exon24:c.T2868C:p.S956S	Score=597;Name=lod=355	NA	8q13.2	Score=809;Name=V$OLF1_01	NA	NA	NA	rs4260880	0.47	0.47	0.498	0.479832	0.4085	0.4663	0.464	0.5265	0.5153	0.42	0.5	0.44	0.55	0.4483	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.36664	1.36664	NA	0.404884	0.519973	NA	0.522	NA	6.4049826
1012	13	31495733	31495733	C	T	exonic	MEDAG	NA	synonymous SNV	MEDAG:NM_032849:exon4:c.C537T:p.P179P	exonic	ENSG00000102802	NA	synonymous SNV	ENSG00000102802:ENST00000380482:exon4:c.C537T:p.P179P	Score=403;Name=lod=58	NA	13q12.3	NA	NA	NA	NA	rs6563571	0.09	0.09	0.077	0.0872604	0.0994	0.0139	0.1239	0.1324	0.0634	0.11	0.01	0.12	0.13	0.0826	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.08252	NA	NA	0.079767	0.124376	NA	0.181	NA	6.4048996
1012	15	100649248	100649248	G	A	exonic	ADAMTS17	NA	synonymous SNV	ADAMTS17:NM_139057:exon14:c.C1962T:p.D654D	exonic	ENSG00000140470	NA	synonymous SNV	ENSG00000140470:ENST00000268070:exon14:c.C1962T:p.D654D	Score=483;Name=lod=123	NA	15q26.3	NA	NA	NA	NA	rs61752832	0.08	0.08	0.08	0.0852636	0.0875	0.0536	0.0648	0.0915	0.1217	0.09	0.06	0.07	0.1	0.0859	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.508337	1.508337	NA	0.088372	0.087608	NA	0.13	NA	6.4048946
1012	5	178634672	178634672	C	T	exonic	ADAMTS2	NA	nonsynonymous SNV	ADAMTS2:NM_014244:exon4:c.G733A:p.V245I,ADAMTS2:NM_021599:exon4:c.G733A:p.V245I	exonic	ENSG00000087116	NA	nonsynonymous SNV	ENSG00000087116:ENST00000251582:exon4:c.G733A:p.V245I,ENSG00000087116:ENST00000274609:exon4:c.G733A:p.V245I	NA	NA	5q35.3	NA	NA	NA	NA	rs398829	0.4	0.4	0.389	0.431909	0.2763	0.6349	0.2565	0.4054	0.5429	0.27	0.64	0.27	0.4	0.3554	0.64	0.48	T	0.003	B	0.003	B	0.746	N	1.000	P	1.59	L	0.28	T	-0.916	T	0.000	T	0.031	-0.107	3.478	1.18	0.250	-0.564	6.688	-0.10659	NA	0.56	0.297093	0.379936	NA	0.232	NA	6.4045404
1012	10	99969568	99969568	A	G	exonic	R3HCC1L	NA	nonsynonymous SNV	R3HCC1L:NM_001256620:exon4:c.A1697G:p.H566R,R3HCC1L:NM_014472:exon4:c.A1697G:p.H566R,R3HCC1L:NM_001256619:exon5:c.A1697G:p.H566R,R3HCC1L:NM_138469:exon5:c.A1697G:p.H566R	exonic	ENSG00000166024	NA	nonsynonymous SNV	ENSG00000166024:ENST00000370584:exon4:c.A1697G:p.H566R,ENSG00000166024:ENST00000298999:exon5:c.A1697G:p.H566R	NA	NA	10q24.2	NA	NA	NA	NA	rs11189513	0.28	0.28	0.251	0.288538	0.3062	0.3542	0.3761	0.087	0.4131	0.32	0.33	0.34	0.11	0.3222	0.34	.	.	0.01	B	0.01	B	0.698	N	1.000	P	1.3	L	3.32	T	-0.901	T	0.000	T	0.019	-0.893	0.452	-1.98	-0.269	-0.007	6.626	-0.893451	NA	0.08	0.301279	0.126872	NA	0.225	NA	6.4036544
1012	1	229773441	229773441	C	T	exonic	URB2	NA	synonymous SNV	URB2:NM_014777:exon4:c.C3081T:p.T1027T	exonic	ENSG00000135763	NA	synonymous SNV	ENSG00000135763:ENST00000258243:exon4:c.C3081T:p.T1027T	NA	NA	1q42.13	Score=855;Name=V$GFI1_01	NA	NA	NA	rs3811475	0.23	0.23	0.223	0.205072	0.0626	0.4315	0.2464	0.2156	0.0746	0.06	0.47	0.21	0.23	0.1373	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.269504	1.269504	NA	0.064535	0.21153	NA	0.203	NA	6.4022316
1012	21	47851753	47851753	A	G	exonic	PCNT	NA	nonsynonymous SNV	PCNT:NM_006031:exon38:c.A8375G:p.Q2792R	exonic	ENSG00000160299	NA	nonsynonymous SNV	ENSG00000160299:ENST00000359568:exon38:c.A8375G:p.Q2792R	NA	NA	21q22.3	NA	NA	NA	NA	rs2073376	0.68	0.68	0.709	0.669928	0.6511	0.619	0.5447	0.8306	0.6135	0.66	0.65	0.56	0.82	0.6397	0.82	0.75	T	0.0	B	0.0	B	0.125	N	1.000	P	-0.625	N	5.0	T	-1.097	T	0.000	T	0.042	-1.982	0.007	2.32	0.020	0.246	8.706	-1.982483	NA	1	0.640349	0.792329	NA	0.71	NA	6.4021844
1012	2	228398422	228398422	A	G	exonic	AGFG1	NA	synonymous SNV	AGFG1:NM_001135189:exon6:c.A852G:p.A284A,AGFG1:NM_001135188:exon7:c.A972G:p.A324A,AGFG1:NM_004504:exon7:c.A972G:p.A324A,AGFG1:NM_001135187:exon8:c.A1044G:p.A348A	exonic	ENSG00000173744	NA	synonymous SNV	ENSG00000173744:ENST00000373671:exon6:c.A852G:p.A284A,ENSG00000173744:ENST00000310078:exon7:c.A972G:p.A324A,ENSG00000173744:ENST00000409171:exon7:c.A972G:p.A324A,ENSG00000173744:ENST00000409315:exon7:c.A972G:p.A324A,ENSG00000173744:ENST00000409979:exon8:c.A1044G:p.A348A	Score=719;Name=lod=1110	NA	2q36.3	NA	NA	NA	NA	rs13015491	0.09	0.09	0.073	0.0694888	0.0964	0.1042	0.1455	0.0023	0.0429	0.1	0.12	0.12	0.0041	0.0858	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.207271	NA	NA	0.082326	0.021108	ID=COSM149082;OCCURENCE=1(stomach)	0.036	NA	6.4021406
1012	21	47831618	47831618	C	T	exonic	PCNT	NA	synonymous SNV	PCNT:NM_006031:exon28:c.C5631T:p.I1877I	exonic	ENSG00000160299	NA	synonymous SNV	ENSG00000160299:ENST00000359568:exon28:c.C5631T:p.I1877I	NA	NA	21q22.3	NA	NA	NA	NA	rs16979162	0.16	0.16	0.152	0.178115	0.0895	0.004	0.0937	0.4879	0.09	0.09	0.0035	0.1	0.48	0.1022	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.470329	NA	NA	0.073625	0.41788	NA	0.196	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000081354.1|RCV000127369.1;CLNDSDB=.|.;CLNDSDBID=.|.	6.4013416
1012	4	36152584	36152584	G	T	exonic	ARAP2	NA	synonymous SNV	ARAP2:NM_015230:exon16:c.C2835A:p.T945T	exonic	ENSG00000047365	NA	synonymous SNV	ENSG00000047365:ENST00000303965:exon16:c.C2835A:p.T945T	Score=645;Name=lod=560	NA	4p14	NA	NA	NA	NA	rs13148785	0.05	0.05	0.053	0.0549121	0.0934	NA	0.0461	0.0862	0.0358	0.09	NA	0.05	0.07	0.0745	0.099	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.044771	NA	NA	0.098534	0.092828	NA	0.116	NA	6.4002326
1012	17	74014668	74014668	T	C	exonic	EVPL	NA	nonsynonymous SNV	EVPL:NM_001988:exon12:c.A1298G:p.Q433R	exonic	ENSG00000167880	NA	nonsynonymous SNV	ENSG00000167880:ENST00000301607:exon12:c.A1298G:p.Q433R,ENSG00000167880:ENST00000586740:exon12:c.A1298G:p.Q433R	NA	NA	17q25.1	NA	NA	NA	NA	rs2071192	0.66	0.66	0.638	0.675919	0.6193	0.755	0.6326	0.6286	0.7474	0.63	0.74	0.63	0.62	0.669	0.74	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-2.045	N	0.49	T	-0.922	T	0.000	T	0.043	-1.97	0.007	0.862	-0.158	0.965	10.664	-1.969808	NA	NA	0.64515	0.64049	NA	0.594	NA	6.3998834
1012	2	24290671	24290671	G	A	exonic	SF3B14	NA	synonymous SNV	SF3B14:NM_016047:exon4:c.C339T:p.L113L	exonic	ENSG00000115128	NA	synonymous SNV	ENSG00000115128:ENST00000233468:exon4:c.C339T:p.L113L	Score=627;Name=lod=471	NA	2p23.3	NA	NA	NA	NA	rs61742149	0.04	0.04	0.036	0.034345	0.0895	0.001	0.062	0.0038	0.0337	0.08	NA	0.07	0.01	0.0696	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.988875	NA	NA	0.107907	0.019982	NA	0.036	NA	6.3996596
1012	13	42442546	42442546	A	G	exonic	VWA8	NA	nonsynonymous SNV	VWA8:NM_001009814:exon10:c.T1148C:p.M383T,VWA8:NM_015058:exon10:c.T1148C:p.M383T	exonic	ENSG00000102763	NA	nonsynonymous SNV	ENSG00000102763:ENST00000281496:exon10:c.T1148C:p.M383T,ENSG00000102763:ENST00000379310:exon10:c.T1148C:p.M383T	NA	NA	13q14.11	NA	NA	NA	NA	rs3742262	0.24	0.24	0.218	0.222244	0.3231	0.1895	0.3026	0.056	0.32	0.34	0.21	0.32	0.07	0.2882	0.34	0.58	T	0.0	B	0.0	B	0.857	N	1.000	P	-1.245	N	3.09	T	-0.910	T	0.000	T	0.024	-2.267	0.004	0.953	0.025	0.140	5.176	-2.267391	NA	0.65	0.322442	0.086473	NA	0.254	NA	6.3995914
1012	18	72347482	72347482	T	C	exonic	ZNF407	NA	synonymous SNV	ZNF407:NM_001146189:exon1:c.T4507C:p.L1503L,ZNF407:NM_001146190:exon1:c.T4507C:p.L1503L,ZNF407:NM_017757:exon1:c.T4507C:p.L1503L	exonic	ENSG00000215421	NA	synonymous SNV	ENSG00000215421:ENST00000299687:exon1:c.T4507C:p.L1503L,ENSG00000215421:ENST00000309902:exon1:c.T4507C:p.L1503L,ENSG00000215421:ENST00000577538:exon1:c.T4507C:p.L1503L,ENSG00000215421:ENST00000582337:exon2:c.T4507C:p.L1503L	Score=444;Name=lod=85	NA	18q22.3	NA	NA	NA	NA	rs12327359	0.41	0.41	0.415	0.423922	0.4175	0.1845	0.3271	0.7201	0.3456	0.42	0.18	0.38	0.7	0.4198	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.636977	NA	NA	0.430204	0.688169	ID=COSM1130046;OCCURENCE=1(prostate)	0.58	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118940.2;CLNDSDB=.;CLNDSDBID=.	6.3991626
1012	5	52369086	52369086	G	A	exonic	ITGA2	NA	synonymous SNV	ITGA2:NM_002203:exon20:c.G2568A:p.L856L	exonic	ENSG00000164171	NA	synonymous SNV	ENSG00000164171:ENST00000296585:exon20:c.G2568A:p.L856L,ENSG00000164171:ENST00000510722:exon20:c.G2568A:p.L856L	Score=343;Name=lod=33	NA	5q11.2	NA	NA	NA	NA	rs3213805	0.1	0.1	0.112	0.0948482	0.0885	0.0188	0.0663	0.2027	0.0542	0.09	0.01	0.06	0.25	0.0835	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.20747	NA	NA	0.096163	0.180436	ID=COSM449741;OCCURENCE=1(breast)	0.109	NA	6.3985036
1012	15	79224747	79224747	C	T	exonic	CTSH	NA	synonymous SNV	CTSH:NM_004390:exon6:c.G459A:p.A153A	exonic	ENSG00000103811	NA	nonsynonymous SNV	ENSG00000103811:ENST00000525807:exon2:c.G131A:p.R44Q	NA	NA	15q25.1	NA	NA	Name=5	NA	rs13345	0.31	0.31	0.344	0.302915	0.1909	0.3214	0.2219	0.5166	0.1677	0.2	0.33	0.22	0.52	0.2207	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.48435	NA	NA	0.190426	0.449909	ID=COSM1162588;OCCURENCE=1(pancreas)	0.362	NA	6.397974
1012	11	194441	194441	C	T	exonic	LOC653486,SCGB1C1	NA	synonymous SNV	LOC653486:NM_001097610:exon3:c.C279T:p.D93D,SCGB1C1:NM_145651:exon3:c.C279T:p.D93D	exonic	ENSG00000188076	NA	synonymous SNV	ENSG00000188076:ENST00000342878:exon3:c.C279T:p.D93D	NA	NA	11p15.5	NA	NA	Name=33	NA	rs61997072	0.12	0.12	0.096	NA	NA	NA	NA	NA	NA	0.12	0.13	0.11	0.09	0.1446	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.137205	NA	NA	0.124765	0.084797	NA	0.007	NA	6.3973016
1012	6	29555809	29555809	C	T	exonic	OR2H2	NA	nonsynonymous SNV	OR2H2:NM_007160:exon1:c.C88T:p.L30F	exonic	ENSG00000204657	NA	nonsynonymous SNV	ENSG00000204657:ENST00000383640:exon1:c.C88T:p.L30F	NA	NA	6p22.1	NA	NA	NA	NA	rs3129034	0.78	0.78	0.784	0.802915	0.6203	0.8899	0.745	0.9077	0.8006	0.61	0.89	0.75	0.93	0.7012	0.93	0.14	T	0.003	B	0.012	B	0.897	N	0.999	P	2.015	M	4.63	T	-0.975	T	0.003	T	0.037	-0.059	3.716	0.682	-0.025	-0.148	9.030	-0.058501	NA	0.18	0.614803	0.872601	NA	0.696	NA	6.3970304
1012	17	56690848	56690848	T	C	exonic	TEX14	NA	synonymous SNV	TEX14:NM_001201457:exon9:c.A957G:p.L319L,TEX14:NM_031272:exon9:c.A939G:p.L313L,TEX14:NM_198393:exon9:c.A939G:p.L313L	exonic	ENSG00000121101	NA	synonymous SNV	ENSG00000121101:ENST00000240361:exon9:c.A957G:p.L319L,ENSG00000121101:ENST00000349033:exon9:c.A939G:p.L313L,ENSG00000121101:ENST00000389934:exon9:c.A939G:p.L313L	Score=433;Name=lod=77	NA	17q22	NA	NA	NA	NA	rs8077548	0.18	0.18	0.182	0.233427	0.0726	0.3036	0.0663	0.3328	0.3108	0.08	0.27	0.07	0.32	0.1315	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.366829	NA	NA	0.065581	0.273491	ID=COSM148309,COSM148308;OCCURENCE=1(stomach)	0.138	NA	6.3969856
1012	5	52351876	52351876	A	G	exonic	ITGA2	NA	synonymous SNV	ITGA2:NM_002203:exon9:c.A993G:p.A331A	exonic	ENSG00000164171	NA	synonymous SNV	ENSG00000164171:ENST00000296585:exon9:c.A993G:p.A331A,ENSG00000164171:ENST00000509814:exon9:c.A993G:p.A331A,ENSG00000164171:ENST00000509960:exon9:c.A993G:p.A331A,ENSG00000164171:ENST00000510722:exon9:c.A993G:p.A331A	Score=571;Name=lod=279	NA	5q11.2	NA	NA	NA	NA	rs3212523	0.08	0.08	0.103	0.0978435	0.0895	0.0327	0.0605	0.1717	0.1002	0.09	0.02	0.05	0.18	0.0866	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.281147	1.281147	NA	0.094717	0.154475	NA	0.101	NA	6.3958496
1012	5	178391860	178391860	G	A	exonic	ZNF454	NA	nonsynonymous SNV	ZNF454:NM_001178089:exon5:c.G455A:p.C152Y,ZNF454:NM_001178090:exon5:c.G455A:p.C152Y,ZNF454:NM_182594:exon5:c.G455A:p.C152Y	exonic	ENSG00000178187	NA	nonsynonymous SNV	ENSG00000178187:ENST00000320129:exon5:c.G455A:p.C152Y,ENSG00000178187:ENST00000519564:exon5:c.G455A:p.C152Y	NA	NA	5q35.3	NA	NA	NA	NA	rs6867221	0.28	0.28	0.267	0.271366	0.3131	0.3403	0.281	0.1104	0.3681	0.32	0.36	0.27	0.13	0.3072	0.36	0.17	T	0.028	B	0.01	B	0.001	N	1.000	P	0	N	3.75	T	-0.908	T	0.000	T	0.117	0.772	8.08	1.45	0.153	0.406	1.845	0.772256	NA	0.6	0.317209	0.142306	NA	0.232	NA	6.3958244
1012	5	150639409	150639409	A	G	exonic	GM2A	NA	nonsynonymous SNV	GM2A:NM_000405:exon2:c.A175G:p.I59V,GM2A:NM_001167607:exon2:c.A175G:p.I59V	exonic	ENSG00000196743	NA	nonsynonymous SNV	ENSG00000196743:ENST00000357164:exon2:c.A175G:p.I59V,ENSG00000196743:ENST00000523466:exon3:c.A220G:p.I74V	NA	NA	5q33.1	NA	NA	NA	NA	rs153477	0.64	0.64	0.626	0.663938	0.6471	0.6637	0.7392	0.5666	0.7597	0.64	0.68	0.7	0.54	0.6645	0.7	1	T	0.0	B	0.0	B	0.459	N	1.000	P	-0.35	N	-0.77	T	-0.956	T	0.000	T	0.182	0.061	4.333	-0.554	-0.230	-0.998	2.277	0.061288	NA	0.52	0.626512	0.573763	NA	0.696	NA	6.3952214
1013	3	8809703	8809703	G	A	exonic	OXTR	NA	synonymous SNV	OXTR:NM_000916:exon3:c.C171T:p.N57N	exonic	ENSG00000180914	NA	synonymous SNV	ENSG00000180914:ENST00000449615:exon2:c.C171T:p.N57N,ENSG00000180914:ENST00000316793:exon3:c.C171T:p.N57N	Score=676;Name=lod=743	NA	3p25.3	NA	Name=CTCF,Rad21,CTCF_(C-20),CTCF_(SC-5916),Pol2,CtBP2	Name=86	NA	rs2228485	0.68	0.68	0.75	0.717851	0.7604	0.7272	0.5937	0.6377	0.8609	0.73	0.71	0.57	0.64	0.754	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.20317	NA	NA	0.757752	0.649203	NA	0.014	NA	6.3945146
1013	1	109338861	109338861	G	C	exonic	STXBP3	NA	synonymous SNV	STXBP3:NM_007269:exon14:c.G1116C:p.L372L	exonic	ENSG00000116266	NA	synonymous SNV	ENSG00000116266:ENST00000370008:exon14:c.G1116C:p.L372L	Score=603;Name=lod=376	NA	1p13.3	Score=840;Name=V$HMX1_01	NA	NA	NA	rs1127635	0.32	0.32	0.306	0.329473	0.4334	0.1925	0.3213	0.2731	0.4458	0.44	0.2	0.35	0.27	0.3948	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.775705	NA	NA	0.443953	0.302996	NA	0.37	NA	6.3945136
1013	22	42905165	42905165	G	A	ncRNA_UTR3	RRP7A	NA	NA	NA	ncRNA_intronic	ENSG00000172250	NA	NA	NA	NA	NA	22q13.2	NA	Name=Pol2,Pol2-4H8	Name=4	NA	rs55732408	0.09	0.09	0.065	0.0756789	0.1461	0.003	0.1758	0.0567	0.0327	0.14	0.0017	0.2	0.05	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.772873	NA	NA	0.126336	0.07948	NA	0.138	NA	6.3942306
1013	1	11905981	11905981	A	G	ncRNA_UTR3	NPPA	NA	NA	NA	ncRNA_UTR3	ENSG00000175206	NA	NA	NA	NA	NA	1p36.22	NA	Name=ZBTB7A_(SC-34508),NRSF,CTCF	Name=68	NA	rs5067	0.14	0.14	0.156	0.179113	0.1233	0.0129	0.1138	0.4183	0.1309	0.11	0.01	0.11	0.35	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.449818	NA	NA	0.149591	0.416185	NA	0.188	NA	6.3937756
1013	14	56078739	56078739	T	G	UTR5	KTN1	NM_001079522:c.-28T>G,NM_001271014:c.-28T>G,NM_004986:c.-28T>G,NM_001079521:c.-28T>G	NA	NA	UTR5	ENSG00000126777	ENST00000557267:c.-28T>G,ENST00000395309:c.-28T>G,ENST00000413890:c.-28T>G,ENST00000555498:c.-28T>G,ENST00000438792:c.-28T>G,ENST00000395314:c.-28T>G,ENST00000459737:c.-28T>G,ENST00000395308:c.-28T>G,ENST00000395311:c.-28T>G,ENST00000416613:c.-28T>G	NA	NA	Score=295;Name=lod=21	NA	14q22.3	NA	Name=MafF_(M8194),MafK_(SC-477),MafK_(ab50322)	Name=2	NA	rs1138345	0.27	0.27	0.238	0.259385	0.3191	0.376	0.2435	0.1051	0.2975	0.31	0.36	0.24	0.12	0.2988	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.17673	NA	NA	0.322892	0.158026	ID=COSN164678;OCCURENCE=1(breast)	0.188	NA	6.3925414
1013	10	12867598	12867598	C	G	exonic	CAMK1D	NA	synonymous SNV	CAMK1D:NM_020397:exon10:c.C948G:p.V316V,CAMK1D:NM_153498:exon10:c.C948G:p.V316V	exonic	ENSG00000183049	NA	synonymous SNV	ENSG00000183049:ENST00000378845:exon10:c.C948G:p.V316V,ENSG00000183049:ENST00000378847:exon10:c.C948G:p.V316V	Score=471;Name=lod=109	NA	10p13	Score=825;Name=V$ATF_01	NA	Name=30	NA	rs1757051	0.77	0.77	0.777	0.773962	0.7634	0.8542	0.7219	0.6997	0.8395	0.77	0.84	0.73	0.72	0.757	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.713628	NA	NA	0.75407	0.712438	NA	0.645	NA	6.3921966
1013	8	11667179	11667179	C	T	exonic	FDFT1	NA	synonymous SNV	FDFT1:NM_004462:exon3:c.C201T:p.N67N	exonic	ENSG00000079459	NA	nonsynonymous SNV	ENSG00000079459:ENST00000529464:exon2:c.C103T:p.R35C	Score=387;Name=lod=50	NA	8p23.1	NA	NA	NA	NA	rs8417	0.23	0.23	0.219	0.237819	0.1918	0.4474	0.2406	0.0923	0.2638	0.19	0.42	0.22	0.09	0.2242	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.489158	1.489158	NA	0.192093	0.116659	NA	0.203	NA	6.391907
1013	16	88706330	88706330	C	T	exonic	IL17C	NA	synonymous SNV	IL17C:NM_013278:exon3:c.C444T:p.S148S	exonic	ENSG00000124391	NA	synonymous SNV	ENSG00000124391:ENST00000244241:exon3:c.C444T:p.S148S	NA	NA	16q24.3	NA	NA	Name=9	NA	rs11076688	0.06	0.06	0.053	0.0613019	0.0865	0.004	0.1066	0.0484	0.0798	0.09	0.0035	0.1	0.05	0.0967	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.315504	NA	NA	0.091647	0.050434	NA	0.065	NA	6.3918196
1013	8	144993377	144993377	A	G	exonic	PLEC	NA	synonymous SNV	PLEC:NM_201378:exon32:c.T10570C:p.L3524L,PLEC:NM_201379:exon32:c.T10546C:p.L3516L,PLEC:NM_201380:exon32:c.T11023C:p.L3675L,PLEC:NM_201381:exon32:c.T10516C:p.L3506L,PLEC:NM_201382:exon32:c.T10612C:p.L3538L,PLEC:NM_201383:exon32:c.T10624C:p.L3542L,PLEC:NM_201384:exon32:c.T10612C:p.L3538L,PLEC:NM_000445:exon33:c.T10693C:p.L3565L	exonic	ENSG00000178209	NA	synonymous SNV	ENSG00000178209:ENST00000322810:exon32:c.T11023C:p.L3675L,ENSG00000178209:ENST00000345136:exon32:c.T10612C:p.L3538L,ENSG00000178209:ENST00000354589:exon32:c.T10612C:p.L3538L,ENSG00000178209:ENST00000354958:exon32:c.T10546C:p.L3516L,ENSG00000178209:ENST00000356346:exon32:c.T10570C:p.L3524L,ENSG00000178209:ENST00000357649:exon32:c.T10624C:p.L3542L,ENSG00000178209:ENST00000398774:exon32:c.T10516C:p.L3506L,ENSG00000178209:ENST00000527096:exon32:c.T10681C:p.L3561L,ENSG00000178209:ENST00000436759:exon33:c.T10693C:p.L3565L	Score=329;Name=lod=29	NA	8q24.3	NA	NA	NA	NA	rs6992333	0.45	0.45	0.466	0.471845	0.4324	0.1438	0.3746	0.8918	0.3517	0.42	0.16	0.39	0.86	0.4148	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.237602	NA	NA	0.428588	0.835526	NA	0.333	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000078833.3;CLNDSDB=.;CLNDSDBID=.	6.3908786
1013	2	108875244	108875244	T	C	exonic	SULT1C3	NA	nonsynonymous SNV	SULT1C3:NM_001008743:exon5:c.T581C:p.M194T	exonic	ENSG00000196228	NA	nonsynonymous SNV	ENSG00000196228:ENST00000329106:exon5:c.T581C:p.M194T,ENSG00000196228:ENST00000376700:exon5:c.T581C:p.M194T	NA	NA	2q12.3	NA	NA	NA	NA	rs6722745	0.53	0.53	0.522	0.508387	0.2753	0.7063	0.4712	0.6679	0.3548	0.3	0.77	0.46	0.65	0.3916	0.77	0.89	T	0.0	B	0.0	B	0.277	N	1.000	P	-1.02	N	4.76	T	-1.064	T	0.000	T	0.014	-1.294	0.039	0.643	-0.292	0.256	1.878	-1.29425	NA	0.67	0.27593	0.61961	NA	0.449	NA	6.3905034
1013	19	52521296	52521296	G	A	exonic	ZNF614	NA	nonsynonymous SNV	ZNF614:NM_025040:exon4:c.C203T:p.T68I	exonic	ENSG00000142556	NA	nonsynonymous SNV	ENSG00000142556:ENST00000270649:exon4:c.C203T:p.T68I,ENSG00000142556:ENST00000356322:exon4:c.C203T:p.T68I,ENSG00000142556:ENST00000595189:exon4:c.C203T:p.T68I	NA	NA	19q13.41	NA	NA	NA	NA	rs9636139	0.48	0.48	0.5	0.542931	0.2813	0.5238	0.4438	0.7587	0.6104	0.29	0.53	0.41	0.77	0.3922	0.77	1	T	0.009	B	0.008	B	.	.	1.000	P	-0.38	N	6.15	T	-1.008	T	0.000	T	0.005	-1.418	0.022	-0.514	-0.570	-0.216	5.233	-1.41794	NA	0.32	0.270698	0.707444	NA	0.5	NA	6.3891354
1013	3	115571364	115571364	C	T	exonic	LSAMP	NA	synonymous SNV	LSAMP:NM_002338:exon4:c.G615A:p.S205S	exonic	ENSG00000185565	NA	synonymous SNV	ENSG00000185565:ENST00000333617:exon4:c.G567A:p.S189S,ENSG00000185565:ENST00000490035:exon4:c.G615A:p.S205S,ENSG00000185565:ENST00000539563:exon5:c.G606A:p.S202S	NA	NA	3q13.31	Score=810;Name=V$COMP1_01	NA	NA	NA	rs3821560	0.12	0.12	0.102	0.132788	0.0855	0.1756	0.304	0.0303	0.1544	0.08	0.17	0.25	0.03	0.1155	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.770651	NA	NA	0.077209	0.039038	ID=COSM149448;OCCURENCE=1(stomach)	0.08	NA	6.3884576
1013	16	75675609	75675609	T	C	exonic	KARS	NA	synonymous SNV	KARS:NM_005548:exon2:c.A75G:p.R25R,KARS:NM_001130089:exon3:c.A159G:p.R53R	exonic	ENSG00000065427	NA	synonymous SNV	ENSG00000065427:ENST00000302445:exon2:c.A75G:p.R25R,ENSG00000065427:ENST00000562875:exon2:c.A75G:p.R25R,ENSG00000065427:ENST00000319410:exon3:c.A159G:p.R53R,ENSG00000065427:ENST00000564578:exon3:c.A159G:p.R53R,ENSG00000065427:ENST00000570215:exon3:c.A159G:p.R53R	Score=554;Name=lod=239	NA	16q23.1	NA	NA	NA	NA	rs5030748	0.04	0.04	0.036	0.0297524	0.0964	NA	0.0403	0.0053	0.0174	0.09	NA	0.04	0.01	0.0724	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.490193	1.490193	NA	0.109535	0.025933	NA	0.065	NA	6.3883316
1013	8	144990528	144990528	A	G	exonic	PLEC	NA	synonymous SNV	PLEC:NM_201378:exon32:c.T13419C:p.A4473A,PLEC:NM_201379:exon32:c.T13395C:p.A4465A,PLEC:NM_201380:exon32:c.T13872C:p.A4624A,PLEC:NM_201381:exon32:c.T13365C:p.A4455A,PLEC:NM_201382:exon32:c.T13461C:p.A4487A,PLEC:NM_201383:exon32:c.T13473C:p.A4491A,PLEC:NM_201384:exon32:c.T13461C:p.A4487A,PLEC:NM_000445:exon33:c.T13542C:p.A4514A	exonic	ENSG00000178209	NA	synonymous SNV	ENSG00000178209:ENST00000322810:exon32:c.T13872C:p.A4624A,ENSG00000178209:ENST00000345136:exon32:c.T13461C:p.A4487A,ENSG00000178209:ENST00000354589:exon32:c.T13461C:p.A4487A,ENSG00000178209:ENST00000354958:exon32:c.T13395C:p.A4465A,ENSG00000178209:ENST00000356346:exon32:c.T13419C:p.A4473A,ENSG00000178209:ENST00000357649:exon32:c.T13473C:p.A4491A,ENSG00000178209:ENST00000398774:exon32:c.T13365C:p.A4455A,ENSG00000178209:ENST00000527096:exon32:c.T13530C:p.A4510A,ENSG00000178209:ENST00000436759:exon33:c.T13542C:p.A4514A	NA	NA	8q24.3	Score=857;Name=V$ZID_01	NA	NA	NA	rs7014582	0.45	0.45	0.372	0.477037	0.4404	0.1508	0.3746	0.8979	0.3548	0.43	0.17	0.4	0.86	0.4191	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.123146	NA	NA	0.418956	0.820208	NA	0.399	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000078848.3;CLNDSDB=.;CLNDSDBID=.	6.3882106
1013	1	27878162	27878162	C	T	exonic	AHDC1	NA	synonymous SNV	AHDC1:NM_001029882:exon6:c.G465A:p.P155P	exonic	ENSG00000126705	NA	synonymous SNV	ENSG00000126705:ENST00000247087:exon5:c.G465A:p.P155P,ENSG00000126705:ENST00000374011:exon6:c.G465A:p.P155P	NA	NA	1p36.11	Score=869;Name=V$E47_01	NA	NA	NA	rs112179924	0.07	0.07	0.077	0.0555112	0.1153	0.004	0.0432	0.0756	0.0286	0.11	0.01	0.04	0.09	0.0718	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.139264	NA	NA	0.091395	0.089197	NA	0.072	NA	6.3881716
1013	8	27255128	27255128	T	C	exonic	PTK2B	NA	synonymous SNV	PTK2B:NM_173175:exon2:c.T27C:p.S9S,PTK2B:NM_173176:exon2:c.T27C:p.S9S,PTK2B:NM_004103:exon3:c.T27C:p.S9S,PTK2B:NM_173174:exon7:c.T27C:p.S9S	exonic	ENSG00000120899	NA	synonymous SNV	ENSG00000120899:ENST00000517339:exon1:c.T27C:p.S9S,ENSG00000120899:ENST00000346049:exon2:c.T27C:p.S9S,ENSG00000120899:ENST00000412793:exon2:c.T27C:p.S9S,ENSG00000120899:ENST00000420218:exon2:c.T27C:p.S9S,ENSG00000120899:ENST00000522517:exon2:c.T27C:p.S9S,ENSG00000120899:ENST00000521164:exon3:c.T27C:p.S9S,ENSG00000120899:ENST00000522338:exon4:c.T27C:p.S9S,ENSG00000120899:ENST00000544172:exon6:c.T27C:p.S9S,ENSG00000120899:ENST00000338238:exon7:c.T27C:p.S9S,ENSG00000120899:ENST00000397501:exon7:c.T27C:p.S9S	Score=511;Name=lod=159	NA	8p21.2	Score=894;Name=V$ARP1_01	NA	NA	NA	rs1045510	0.34	0.34	0.327	0.318091	0.4324	0.2748	0.3818	0.2057	0.3517	0.44	0.27	0.38	0.22	0.3997	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.502433	1.502433	NA	0.446628	0.23241	NA	0.304	NA	6.3879386
1013	1	104116413	104116413	T	C	exonic	AMY2B	NA	synonymous SNV	AMY2B:NM_020978:exon6:c.T597C:p.N199N	exonic	ENSG00000240038	NA	synonymous SNV	ENSG00000240038:ENST00000477657:exon5:c.T597C:p.N199N,ENSG00000240038:ENST00000361355:exon6:c.T597C:p.N199N	Score=597;Name=lod=357	NA	1p21.1	NA	NA	NA	NA	rs1065578	0.05	0.05	0.036	0.0379393	0.1044	NA	0.0504	0.0106	0.0368	0.11	NA	0.06	0.01	0.0754	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.608237	NA	NA	0.098953	0.028597	NA	0.109	NA	6.3879136
1013	9	135538050	135538050	C	T	exonic	DDX31	NA	synonymous SNV	DDX31:NM_022779:exon2:c.G423A:p.A141A,DDX31:NM_138620:exon2:c.G423A:p.A141A	exonic	ENSG00000125485	NA	synonymous SNV	ENSG00000125485:ENST00000310532:exon2:c.G423A:p.A141A,ENSG00000125485:ENST00000372153:exon2:c.G423A:p.A141A,ENSG00000125485:ENST00000372159:exon2:c.G423A:p.A141A,ENSG00000125485:ENST00000438527:exon2:c.G36A:p.A12A,ENSG00000125485:ENST00000544003:exon3:c.G135A:p.A45A	NA	NA	9q34.13	NA	NA	Name=4	NA	rs35918594	0.05	0.05	0.042	0.0369409	0.0944	0.003	0.0504	0.0091	0.0409	0.1	0.01	0.06	0.01	0.0788	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.68434	NA	NA	0.105698	0.019519	NA	0.058	NA	6.3877686
1013	5	52368472	52368472	C	T	exonic	ITGA2	NA	synonymous SNV	ITGA2:NM_002203:exon19:c.C2376T:p.D792D	exonic	ENSG00000164171	NA	synonymous SNV	ENSG00000164171:ENST00000296585:exon19:c.C2376T:p.D792D,ENSG00000164171:ENST00000509814:exon19:c.C2376T:p.D792D,ENSG00000164171:ENST00000510722:exon19:c.C2376T:p.D792D	Score=455;Name=lod=94	NA	5q11.2	NA	NA	NA	NA	rs3212583	0.11	0.11	0.123	0.111222	0.0885	0.0317	0.0663	0.23	0.0879	0.09	0.03	0.06	0.28	0.0941	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.189823	NA	NA	0.096395	0.203451	NA	0.109	NA	6.3876716
1013	17	3336260	3336260	A	G	exonic	OR1E2	NA	synonymous SNV	OR1E2:NM_003554:exon1:c.T876C:p.P292P	exonic	ENSG00000127780	NA	synonymous SNV	ENSG00000127780:ENST00000248384:exon1:c.T876C:p.P292P	Score=554;Name=lod=239	NA	17p13.2	Score=944;Name=V$AP1FJ_Q2	NA	NA	NA	rs61739591	0.19	0.19	0.175	0.17492	0.4543	0.002	0.2464	0.0643	0.1646	0.4	0.0035	0.24	0.06	0.3397	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.023192	NA	NA	0.485	0.138675	NA	0.116	NA	6.3876666
1013	1	205819039	205819039	C	T	exonic	PM20D1	NA	synonymous SNV	PM20D1:NM_152491:exon1:c.G162A:p.A54A	exonic	ENSG00000162877	NA	synonymous SNV	ENSG00000162877:ENST00000367136:exon1:c.G162A:p.A54A	Score=425;Name=lod=71	NA	1q32.1	NA	NA	NA	NA	rs11540016	0.16	0.16	0.162	0.160144	0.0964	0.4246	0.0605	0.053	0.1687	0.1	0.42	0.06	0.05	0.1087	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.560156	1.560156	NA	0.075233	0.060145	NA	0.087	NA	6.3863336
1013	8	27466315	27466315	T	C	intronic	CLU	NA	NA	NA	intronic	ENSG00000120885	NA	NA	NA	NA	Name=Alzheimer's disease (late onset)	8p21.1	NA	Name=USF-1,NANOG_(SC-33759),GATA-2,Max,USF1_(SC-8983),TAF1,USF2	Name=33	NA	rs1532278	0.72	0.72	0.73	0.736422	0.6143	0.7817	0.6729	0.8419	0.7178	0.61	0.8	0.66	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.279443	NA	NA	NA	NA	NA	0.674	NA	6.3857
1013	17	20269243	20269243	A	G	ncRNA_exonic	CCDC144CP	NA	NA	NA	ncRNA_exonic	ENSG00000154898	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs9892672	NA	NA	NA	0.113818	0.1203	0.0962	0.1441	0.0953	0.1288	NA	NA	NA	NA	0.1613	NA	0.24	T	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.927	T	0.108	T	.	-1.48	0.018	0.918	0.058	3.864	6.211	-1.47951	NA	0.23	NA	NA	NA	NA	NA	6.3850666
1014	6	170070723	170070723	A	G	exonic	WDR27	NA	nonsynonymous SNV	WDR27:NM_182552:exon4:c.T398C:p.L133P	exonic	ENSG00000184465	NA	nonsynonymous SNV	ENSG00000184465:ENST00000333572:exon4:c.T398C:p.L133P,ENSG00000184465:ENST00000420344:exon4:c.T398C:p.L133P,ENSG00000184465:ENST00000448612:exon4:c.T398C:p.L133P	NA	NA	6q27	NA	NA	NA	NA	rs4236176	0.52	0.52	0.501	0.53734	0.2922	0.9365	0.5548	0.4803	0.4427	0.3	0.92	0.49	0.41	0.395	0.92	1	T	0.0	B	0.0	B	0.268	N	1.000	P	-1.52	N	2.37	T	-0.965	T	0.014	T	0.115	-1.175	0.086	0.661	-0.185	0.527	9.842	-1.174843	NA	0.34	0.261257	0.431549	NA	0.413	NA	6.3848764
1014	18	56203411	56203411	G	C	exonic	ALPK2	NA	synonymous SNV	ALPK2:NM_052947:exon5:c.C4008G:p.P1336P	exonic	ENSG00000198796	NA	synonymous SNV	ENSG00000198796:ENST00000361673:exon5:c.C4008G:p.P1336P	NA	NA	18q21.32	Score=748;Name=V$SEF1_C	Name=TBP,MafK_(ab50322),Pol2-4H8,MafF_(M8194),MafK_(SC-477)	Name=8	NA	rs3809980	0.7	0.7	0.641	0.671526	0.7674	0.7966	0.6772	0.4667	0.7168	0.78	0.81	0.7	0.43	0.7461	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.807245	NA	NA	0.768372	0.517022	NA	0.645	NA	6.3847946
1014	8	144992862	144992862	A	G	exonic	PLEC	NA	synonymous SNV	PLEC:NM_201378:exon32:c.T11085C:p.A3695A,PLEC:NM_201379:exon32:c.T11061C:p.A3687A,PLEC:NM_201380:exon32:c.T11538C:p.A3846A,PLEC:NM_201381:exon32:c.T11031C:p.A3677A,PLEC:NM_201382:exon32:c.T11127C:p.A3709A,PLEC:NM_201383:exon32:c.T11139C:p.A3713A,PLEC:NM_201384:exon32:c.T11127C:p.A3709A,PLEC:NM_000445:exon33:c.T11208C:p.A3736A	exonic	ENSG00000178209	NA	synonymous SNV	ENSG00000178209:ENST00000322810:exon32:c.T11538C:p.A3846A,ENSG00000178209:ENST00000345136:exon32:c.T11127C:p.A3709A,ENSG00000178209:ENST00000354589:exon32:c.T11127C:p.A3709A,ENSG00000178209:ENST00000354958:exon32:c.T11061C:p.A3687A,ENSG00000178209:ENST00000356346:exon32:c.T11085C:p.A3695A,ENSG00000178209:ENST00000357649:exon32:c.T11139C:p.A3713A,ENSG00000178209:ENST00000398774:exon32:c.T11031C:p.A3677A,ENSG00000178209:ENST00000527096:exon32:c.T11196C:p.A3732A,ENSG00000178209:ENST00000436759:exon33:c.T11208C:p.A3736A	Score=477;Name=lod=116	NA	8q24.3	NA	NA	NA	NA	rs7819099	0.43	0.43	0.42	0.446086	0.4364	0.1448	0.3703	0.7844	0.363	0.42	0.16	0.38	0.78	0.4055	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.470115	NA	NA	0.440355	0.733214	ID=COSM454176,COSM454177,COSM1489095;OCCURENCE=1(breast)	0.471	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000078837.3;CLNDSDB=.;CLNDSDBID=.	6.3844116
1014	16	2070568	2070568	A	C	exonic	NPW	NA	nonsynonymous SNV	NPW:NM_001099456:exon2:c.A446C:p.D149A	exonic	ENSG00000183971	NA	nonsynonymous SNV	ENSG00000183971:ENST00000329610:exon2:c.A446C:p.D149A,ENSG00000183971:ENST00000566435:exon2:c.A290C:p.D97A,ENSG00000183971:ENST00000567649:exon3:c.A361C:p.T121P	NA	NA	16p13.3	NA	NA	NA	NA	rs2286472	0.38	0.38	0.333	0.361422	0.329	0.3313	0.2579	0.6218	0.1472	0.32	0.3	0.29	0.62	0.3041	0.62	0.72	T	0.0	B	0.0	B	0.727	N	1.000	P	0	N	0.59	T	-0.927	T	0.000	T	0.043	-1.887	0.008	-0.235	-0.424	-0.827	2.156	-1.886957	NA	0.7	0.316026	0.57586	ID=COSM434810;OCCURENCE=2(breast)	0.406	NA	6.3842074
1014	11	62678306	62678306	G	T	exonic	CHRM1	NA	synonymous SNV	CHRM1:NM_000738:exon2:c.C267A:p.G89G	exonic	ENSG00000168539	NA	synonymous SNV	ENSG00000168539:ENST00000306960:exon2:c.C267A:p.G89G,ENSG00000168539:ENST00000536524:exon2:c.C267A:p.G89G,ENSG00000168539:ENST00000543973:exon3:c.C267A:p.G89G	Score=542;Name=lod=212	NA	11q12.3	NA	NA	NA	NA	rs2067477	0.09	0.09	0.061	0.0800719	0.0915	0.0843	0.268	0.0113	0.0235	0.09	0.1	0.19	0.02	0.1013	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.660983	1.660983	NA	0.090158	0.021354	NA	0.116	NA	6.3837086
1014	19	40368478	40368478	G	A	exonic	FCGBP	NA	synonymous SNV	FCGBP:NM_003890:exon28:c.C12870T:p.P4290P	exonic	ENSG00000090920	NA	synonymous SNV	ENSG00000090920:ENST00000221347:exon28:c.C12870T:p.P4290P	Score=346;Name=lod=34	NA	19q13.2	NA	NA	NA	NA	rs77170940	NA	NA	0.036	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.283	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.219562	NA	NA	NA	NA	ID=COSM295270;OCCURENCE=1(large_intestine)	0.029	NA	6.3836666
1014	11	62677220	62677220	G	A	exonic	CHRM1	NA	synonymous SNV	CHRM1:NM_000738:exon2:c.C1353T:p.S451S	exonic	ENSG00000168539	NA	synonymous SNV	ENSG00000168539:ENST00000306960:exon2:c.C1353T:p.S451S,ENSG00000168539:ENST00000543973:exon3:c.C1353T:p.S451S	NA	NA	11q12.3	NA	NA	Name=2	NA	rs2067480	0.09	0.09	0.069	0.0800719	0.0915	0.0843	0.268	0.0113	0.0235	0.09	0.1	0.19	0.02	0.1016	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.271286	NA	NA	0.090275	0.021581	NA	0.116	NA	6.3832916
1014	3	133327457	133327457	T	C	exonic	TOPBP1	NA	synonymous SNV	TOPBP1:NM_007027:exon27:c.A4347G:p.S1449S	exonic	ENSG00000163781	NA	synonymous SNV	ENSG00000163781:ENST00000260810:exon27:c.A4347G:p.S1449S	NA	NA	3q22.1	NA	NA	Name=9	NA	rs1051772	0.1	0.1	0.101	0.0930511	0.1044	0.0506	0.0706	0.1694	0.0378	0.1	0.06	0.08	0.14	0.0834	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.008118	NA	NA	0.095784	0.150541	NA	0.116	NA	6.3830826
1014	19	49658390	49658390	T	C	exonic	HRC	NA	synonymous SNV	HRC:NM_002152:exon1:c.A105G:p.L35L	exonic	ENSG00000130528	NA	synonymous SNV	ENSG00000130528:ENST00000252825:exon1:c.A105G:p.L35L,ENSG00000130528:ENST00000595625:exon1:c.A105G:p.L35L	NA	NA	19q13.33	NA	Name=ELF1_(SC-631),CHD2_(N-1250),E2F6_(H-50),TAF1,HMGN3,GABP,c-Myc,ZBTB7A_(SC-34508),HEY1,MafK_(ab50322),TBP,YY1	Name=5	NA	rs3745299	0.45	0.45	0.421	0.469249	0.4095	0.2996	0.4827	0.6263	0.4836	0.41	0.3	0.54	0.65	0.4412	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.080432	NA	NA	0.433953	0.584203	NA	0.428	NA	6.3820136
1014	6	29691140	29691140	C	G	UTR5	HLA-F	NM_001098478:c.-101C>G,NM_001098479:c.-101C>G,NM_018950:c.-101C>G	NA	NA	ncRNA_exonic	ENSG00000225864	NA	NA	NA	NA	NA	6p22.1	NA	Name=TBP,Oct-2,ELF1_(SC-631),NFKB,Pol2-4H8,c-Fos,Pol2,SP1,RFX5_(N-494),YY1,POU2F2,TAF1	Name=135	NA	rs2072896	0.19	0.19	0.19	0.23103	0.1193	0.2917	0.1628	0.2632	0.2883	0.12	0.27	0.15	0.24	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.597497	NA	NA	NA	NA	NA	0.225	NA	6.3807
1014	19	52888048	52888048	G	A	exonic	ZNF880	NA	synonymous SNV	ZNF880:NM_001145434:exon4:c.G1215A:p.E405E	exonic	ENSG00000221923	NA	synonymous SNV	ENSG00000221923:ENST00000422689:exon4:c.G1215A:p.E405E	Score=383;Name=lod=48	NA	19q13.41	NA	NA	NA	NA	rs324124	0.16	0.16	NA	0.154153	0.1421	0.1468	0.1124	0.2526	0.0706	0.15	0.14	0.1	0.25	0.1441	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.19812	NA	NA	NA	NA	NA	0.116	NA	6.3804666
1014	11	20673867	20673867	G	A	exonic	SLC6A5	NA	synonymous SNV	SLC6A5:NM_004211:exon15:c.G2103A:p.E701E	exonic	ENSG00000165970	NA	synonymous SNV	ENSG00000165970:ENST00000525748:exon15:c.G2103A:p.E701E	Score=584;Name=lod=316	NA	11p15.1	Score=823;Name=V$BRN2_01	NA	NA	NA	rs2276433	0.49	0.49	0.475	0.478235	0.4414	0.8234	0.5562	0.1543	0.5429	0.44	0.8	0.51	0.19	0.4506	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.16339	NA	NA	0.394767	0.185202	NA	0.391	NA	6.3798996
1014	6	134493947	134493947	A	G	intronic	SGK1	NA	NA	NA	intronic	ENSG00000118515	NA	NA	NA	Score=259;Name=lod=15	NA	6q23.2	NA	Name=p300	Name=43	NA	rs1743966	0.24	0.24	0.241	0.232428	0.1958	0.2609	0.2406	0.329	0.1043	0.2	0.21	0.2	0.39	0.2174	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.033012	NA	NA	0.206977	0.287108	NA	0.29	NA	6.379823
1014	3	167510472	167510472	G	A	exonic	SERPINI1	NA	synonymous SNV	SERPINI1:NM_001122752:exon4:c.G576A:p.S192S,SERPINI1:NM_005025:exon4:c.G576A:p.S192S	exonic	ENSG00000163536	NA	synonymous SNV	ENSG00000163536:ENST00000295777:exon4:c.G576A:p.S192S,ENSG00000163536:ENST00000446050:exon4:c.G576A:p.S192S,ENSG00000163536:ENST00000472747:exon4:c.G576A:p.S192S	Score=696;Name=lod=896	NA	3q26.1	NA	NA	NA	NA	rs2229697	0.11	0.11	0.111	0.115016	0.1004	0.0526	0.1542	0.2073	0.0419	0.1	0.06	0.12	0.2	0.0985	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.85727	NA	NA	0.08814	0.198593	NA	0.116	NA	6.3796266
1014	1	35900615	35900615	A	G	exonic	KIAA0319L	NA	synonymous SNV	KIAA0319L:NM_024874:exon21:c.T3030C:p.D1010D	exonic	ENSG00000142687	NA	synonymous SNV	ENSG00000142687:ENST00000373266:exon12:c.T1341C:p.D447D,ENSG00000142687:ENST00000325722:exon21:c.T3030C:p.D1010D,ENSG00000142687:ENST00000426982:exon21:c.T3030C:p.D1010D	NA	NA	1p34.3	NA	NA	Name=2	NA	rs3814302	0.44	0.44	0.44	0.453674	0.0497	0.7679	0.3674	0.7239	0.2413	0.04	0.8	0.33	0.73	0.2044	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.671129	NA	NA	0.03314	0.597821	NA	0.319	NA	6.3794266
1014	9	140392616	140392616	G	A	exonic	PNPLA7	NA	synonymous SNV	PNPLA7:NM_152286:exon16:c.C1764T:p.I588I,PNPLA7:NM_001098537:exon17:c.C1839T:p.I613I	exonic	ENSG00000130653	NA	synonymous SNV	ENSG00000130653:ENST00000371457:exon6:c.C582T:p.I194I,ENSG00000130653:ENST00000277531:exon16:c.C1764T:p.I588I,ENSG00000130653:ENST00000434090:exon16:c.C1737T:p.I579I,ENSG00000130653:ENST00000406427:exon17:c.C1839T:p.I613I	Score=485;Name=lod=125	NA	9q34.3	NA	NA	NA	NA	rs61754920	0.18	0.18	0.191	0.191693	0.0795	0.2341	0.0807	0.3502	0.1278	0.08	0.22	0.07	0.35	0.1225	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.708476	1.708476	NA	0.085718	0.325761	ID=COSM150748;OCCURENCE=1(stomach)	0.254	NA	6.3789486
1014	19	17886940	17886940	G	A	exonic	FCHO1	NA	synonymous SNV	FCHO1:NM_001161359:exon14:c.G1002A:p.A334A,FCHO1:NM_001161358:exon15:c.G1152A:p.A384A,FCHO1:NM_001161357:exon16:c.G1152A:p.A384A,FCHO1:NM_015122:exon16:c.G1152A:p.A384A	exonic	ENSG00000130475	NA	synonymous SNV	ENSG00000130475:ENST00000597512:exon12:c.G1173A:p.A391A,ENSG00000130475:ENST00000252771:exon14:c.G1152A:p.A384A,ENSG00000130475:ENST00000389133:exon14:c.G1152A:p.A384A,ENSG00000130475:ENST00000595033:exon14:c.G1002A:p.A334A,ENSG00000130475:ENST00000596951:exon14:c.G1152A:p.A384A,ENSG00000130475:ENST00000539407:exon15:c.G1152A:p.A384A,ENSG00000130475:ENST00000600676:exon15:c.G1152A:p.A384A,ENSG00000130475:ENST00000594202:exon16:c.G1152A:p.A384A,ENSG00000130475:ENST00000596536:exon16:c.G1152A:p.A384A	NA	NA	19p13.11	Score=810;Name=V$AP4_01	Name=EBF,EBF1_(C-8)	NA	NA	rs2287854	0.57	0.57	0.566	0.573882	0.4006	0.7778	0.536	0.5696	0.5746	0.41	0.81	0.52	0.59	0.4783	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.843765	NA	NA	0.409302	0.549932	NA	0.551	NA	6.3784646
1014	10	88768253	88768253	A	G	exonic	AGAP11	NA	nonsynonymous SNV	AGAP11:NM_133447:exon12:c.A244G:p.I82V	ncRNA_exonic	ENSG00000151303,ENSG00000261011,ENSG00000271880	NA	NA	NA	Score=669;Name=lod=698	NA	10q23.2	NA	Name=c-Myc,ERalpha_a,FOXA1_(C-20)	Name=8	NA	rs2641563	0.8	0.8	0.791	0.791134	0.7048	0.9325	0.7522	0.8585	0.6708	0.7	0.93	0.72	0.86	0.7313	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.515727	NA	NA	0.685565	0.833333	NA	0.283	NA	6.378335
1014	19	1056065	1056065	A	G	exonic	ABCA7	NA	synonymous SNV	ABCA7:NM_019112:exon32:c.A4239G:p.R1413R	exonic	ENSG00000064687	NA	synonymous SNV	ENSG00000064687:ENST00000435683:exon26:c.A3825G:p.R1275R,ENSG00000064687:ENST00000433129:exon31:c.A4239G:p.R1413R,ENSG00000064687:ENST00000263094:exon32:c.A4239G:p.R1413R	Score=410;Name=lod=62	NA	19p13.3	Score=964;Name=V$LMO2COM_02	NA	NA	NA	rs881768	0.44	0.44	0.429	0.442093	0.4195	0.3552	0.4265	0.5393	0.4346	0.44	0.38	0.44	0.5	0.4451	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.763665	NA	NA	0.424715	0.527033	NA	0.326	NA	6.3773516
1014	2	233322958	233322958	T	C	exonic	ALPI	NA	synonymous SNV	ALPI:NM_001631:exon9:c.T1023C:p.G341G	exonic	ENSG00000163295	NA	synonymous SNV	ENSG00000163295:ENST00000295463:exon9:c.T1023C:p.G341G	NA	NA	2q37.1	NA	Name=ERalpha_a	NA	NA	rs41265121	0.1	0.1	0.089	0.0978435	0.1093	0.1012	0.0764	0.1089	0.0828	0.11	0.09	0.08	0.1	0.0946	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.111922	NA	NA	0.086047	0.1069	NA	0.101	NA	6.3767196
1014	12	42854205	42854205	A	G	exonic	PRICKLE1	NA	synonymous SNV	PRICKLE1:NM_001144881:exon8:c.T1902C:p.S634S,PRICKLE1:NM_001144882:exon8:c.T1902C:p.S634S,PRICKLE1:NM_001144883:exon8:c.T1902C:p.S634S,PRICKLE1:NM_153026:exon8:c.T1902C:p.S634S	exonic	ENSG00000139174	NA	synonymous SNV	ENSG00000139174:ENST00000345127:exon8:c.T1902C:p.S634S,ENSG00000139174:ENST00000445766:exon8:c.T1902C:p.S634S,ENSG00000139174:ENST00000455697:exon8:c.T1902C:p.S634S,ENSG00000139174:ENST00000548696:exon8:c.T1902C:p.S634S,ENSG00000139174:ENST00000552240:exon8:c.T1902C:p.S634S	NA	NA	12q12	NA	Name=JunD	NA	NA	rs3747562	0.46	0.46	0.425	0.429313	0.4284	0.4137	0.4841	0.472	0.3497	0.42	0.44	0.5	0.49	0.4385	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.384777	NA	NA	0.423256	0.458693	NA	0.493	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000082658.3;CLNDSDB=.;CLNDSDBID=.	6.3765106
1014	19	2389872	2389872	G	C	exonic	TMPRSS9	NA	nonsynonymous SNV	TMPRSS9:NM_182973:exon1:c.G89C:p.S30T	exonic	ENSG00000178297	NA	nonsynonymous SNV	ENSG00000178297:ENST00000332578:exon1:c.G89C:p.S30T	NA	NA	19p13.3	NA	NA	NA	NA	rs891174	0.58	0.58	0.579	0.583466	0.666	0.4474	0.4352	0.6536	0.6493	0.66	0.44	0.5	0.67	0.6218	0.67	0.37	T	0.0	B	0.0	B	0.999	N	1.000	P	0	N	-2.23	D	-0.945	T	0.000	T	0.042	0.904	8.676	1.09	-0.342	0.436	4.121	0.903904	NA	0.09	0.669419	0.609396	NA	0.471	NA	6.3761144
1014	4	113352628	113352628	A	G	exonic	ALPK1	NA	nonsynonymous SNV	ALPK1:NM_001253884:exon10:c.A1691G:p.H564R,ALPK1:NM_001102406:exon11:c.A1925G:p.H642R,ALPK1:NM_025144:exon11:c.A1925G:p.H642R	exonic	ENSG00000073331	NA	nonsynonymous SNV	ENSG00000073331:ENST00000504176:exon10:c.A1691G:p.H564R,ENSG00000073331:ENST00000177648:exon11:c.A1925G:p.H642R,ENSG00000073331:ENST00000458497:exon11:c.A1925G:p.H642R	NA	NA	4q25	NA	NA	NA	NA	rs13148353	0.67	0.67	0.682	0.658546	0.6511	0.7014	0.5807	0.7481	0.5562	0.65	0.73	0.58	0.72	0.6495	0.73	0.44	T	0.0	B	0.0	B	0.008	N	1.000	P	0	N	4.41	T	-1.094	T	0.000	T	0.016	0.881	8.574	2.53	-0.030	0.246	3.992	0.880768	NA	0.58	0.657093	0.725374	NA	0.623	NA	6.3756404
1014	4	113353285	113353285	T	C	exonic	ALPK1	NA	nonsynonymous SNV	ALPK1:NM_001253884:exon10:c.T2348C:p.M783T,ALPK1:NM_001102406:exon11:c.T2582C:p.M861T,ALPK1:NM_025144:exon11:c.T2582C:p.M861T	exonic	ENSG00000073331	NA	nonsynonymous SNV	ENSG00000073331:ENST00000504176:exon10:c.T2348C:p.M783T,ENSG00000073331:ENST00000177648:exon11:c.T2582C:p.M861T,ENSG00000073331:ENST00000458497:exon11:c.T2582C:p.M861T	NA	NA	4q25	NA	NA	NA	NA	rs11726117	0.67	0.67	0.697	0.658546	0.6501	0.7014	0.5807	0.7481	0.5573	0.65	0.73	0.58	0.72	0.6497	0.73	1	T	0.0	B	0.0	B	0.139	N	1.000	P	-1.78	N	4.45	T	-1.047	T	0.000	T	0.037	-1.767	0.01	1.74	0.136	-1.408	4.870	-1.766884	NA	0.59	0.657907	0.725148	NA	0.623	NA	6.3756264
1014	21	45479055	45479055	C	T	exonic	TRAPPC10	NA	synonymous SNV	TRAPPC10:NM_003274:exon6:c.C750T:p.D250D	exonic	ENSG00000160218	NA	synonymous SNV	ENSG00000160218:ENST00000291574:exon6:c.C750T:p.D250D,ENSG00000160218:ENST00000380221:exon6:c.C750T:p.D250D,ENSG00000160218:ENST00000422875:exon6:c.C750T:p.D250D	Score=617;Name=lod=428	NA	21q22.3	NA	NA	NA	NA	rs2838475	0.07	0.07	0.057	0.0549121	0.1093	0.0506	0.0576	0.0129	0.0583	0.11	0.05	0.07	0.01	0.0771	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.449379	1.449379	NA	0.105233	0.025647	NA	0.058	NA	6.3750336
1015	8	145741765	145741765	G	A	exonic	RECQL4	NA	synonymous SNV	RECQL4:NM_004260:exon5:c.C738T:p.S246S	exonic	ENSG00000160957	NA	synonymous SNV	ENSG00000160957:ENST00000428558:exon5:c.C738T:p.S246S	NA	NA	8q24.3	NA	Name=NRSF	NA	NA	rs4244613	0.36	0.36	0.311	0.370008	0.4254	0.4831	0.4568	0.0885	0.5153	0.43	0.42	0.49	0.08	0.4394	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.303791	NA	NA	0.427011	0.157043	NA	0.268	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000080898.1;CLNDSDB=.;CLNDSDBID=.	6.3748556
1015	2	37230728	37230728	T	C	exonic	HEATR5B	NA	synonymous SNV	HEATR5B:NM_019024:exon31:c.A5007G:p.V1669V	exonic	ENSG00000008869	NA	synonymous SNV	ENSG00000008869:ENST00000233099:exon31:c.A5007G:p.V1669V,ENSG00000008869:ENST00000354531:exon31:c.A5007G:p.V1669V	Score=595;Name=lod=348	NA	2p22.2	NA	NA	NA	NA	rs1007823	0.19	0.19	0.178	0.180511	0.0855	0.5278	0.1614	0.0061	0.1697	0.09	0.53	0.13	0.0041	0.13	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.253372	1.253372	NA	0.077093	0.020881	ID=COSM148839;OCCURENCE=1(stomach)	0.138	NA	6.3740736
1015	16	70546234	70546234	G	A	exonic	COG4	NA	synonymous SNV	COG4:NM_001195139:exon5:c.C646T:p.L216L,COG4:NM_015386:exon5:c.C646T:p.L216L	exonic	ENSG00000103051	NA	synonymous SNV	ENSG00000103051:ENST00000323786:exon5:c.C646T:p.L216L,ENSG00000103051:ENST00000393612:exon5:c.C634T:p.L212L,ENSG00000103051:ENST00000482252:exon5:c.C634T:p.L212L,ENSG00000103051:ENST00000534772:exon5:c.C415T:p.L139L,ENSG00000103051:ENST00000564653:exon5:c.C519T:p.I173I	Score=599;Name=lod=364	NA	16q22.1	NA	NA	NA	NA	rs3762171	0.44	0.44	0.427	0.470248	0.4175	0.5813	0.415	0.2859	0.6984	0.41	0.59	0.43	0.34	0.4511	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.134846	NA	NA	0.424302	0.298681	NA	0.507	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000081733.3;CLNDSDB=.;CLNDSDBID=.	6.3737646
1015	7	116436097	116436097	G	A	exonic	MET	NA	synonymous SNV	MET:NM_000245:exon21:c.G4092A:p.P1364P,MET:NM_001127500:exon21:c.G4146A:p.P1382P	exonic	ENSG00000105976	NA	synonymous SNV	ENSG00000105976:ENST00000539704:exon7:c.G702A:p.P234P,ENSG00000105976:ENST00000318493:exon21:c.G4146A:p.P1382P,ENSG00000105976:ENST00000397752:exon21:c.G4092A:p.P1364P	Score=459;Name=lod=98	NA	7q31.2	NA	NA	NA	NA	rs41737	0.38	0.38	0.354	0.354633	0.4433	0.4673	0.4726	0.0356	0.4949	0.44	0.53	0.43	0.05	0.4248	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.488647	1.488647	NA	0.425179	0.10398	ID=COSM150379;OCCURENCE=1(stomach)	0.239	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000079494.1;CLNDSDB=.;CLNDSDBID=.	6.3733876
1015	1	5926507	5926507	T	C	exonic	NPHP4	NA	synonymous SNV	NPHP4:NM_015102:exon26:c.A3570G:p.E1190E	exonic	ENSG00000131697	NA	synonymous SNV	ENSG00000131697:ENST00000378156:exon26:c.A3570G:p.E1190E	Score=371;Name=lod=43	NA	1p36.31	NA	NA	NA	NA	rs555164	0.32	0.32	0.257	0.319688	0.4135	0.2837	0.379	0.1619	0.4315	0.41	0.28	0.41	0.17	0.4604	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.759752	NA	NA	0.419699	0.19845	ID=COSM1126976;OCCURENCE=1(prostate)	0.341	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000081716.1;CLNDSDB=.;CLNDSDBID=.	6.3730676
1015	17	43175906	43175906	C	T	exonic	NMT1	NA	synonymous SNV	NMT1:NM_021079:exon7:c.C870T:p.P290P	exonic	ENSG00000136448	NA	synonymous SNV	ENSG00000136448:ENST00000258960:exon7:c.C870T:p.P290P,ENSG00000136448:ENST00000592782:exon8:c.C870T:p.P290P	Score=538;Name=lod=204	NA	17q21.31	NA	NA	NA	NA	rs2239922	0.16	0.16	0.167	0.170727	0.0845	0.2669	0.2003	0.1717	0.138	0.09	0.25	0.19	0.15	0.1255	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.177098	NA	NA	0.083953	0.160917	NA	0.138	NA	6.3727136
1015	7	35225518	35225518	C	A	ncRNA_exonic	DPY19L2P1	NA	NA	NA	ncRNA_exonic	ENSG00000189212	NA	NA	NA	NA	NA	7p14.2	Score=816;Name=V$CMYB_01	Name=CTCF,Rad21,ZNF263	NA	NA	rs10262841	0.22	0.22	0.182	0.199681	0.2942	0.1855	0.2421	0.1089	0.2096	0.29	0.19	0.24	0.16	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.038056	NA	NA	NA	NA	NA	0.268	NA	6.3724666
1015	19	5210762	5210762	G	A	exonic	PTPRS	NA	synonymous SNV	PTPRS:NM_130853:exon25:c.C3948T:p.D1316D,PTPRS:NM_130855:exon26:c.C3960T:p.D1320D,PTPRS:NM_130854:exon29:c.C5175T:p.D1725D,PTPRS:NM_002850:exon34:c.C5289T:p.D1763D	exonic	ENSG00000105426	NA	synonymous SNV	ENSG00000105426:ENST00000592099:exon24:c.C3948T:p.D1316D,ENSG00000105426:ENST00000353284:exon25:c.C3948T:p.D1316D,ENSG00000105426:ENST00000588012:exon28:c.C5175T:p.D1725D,ENSG00000105426:ENST00000348075:exon29:c.C5175T:p.D1725D,ENSG00000105426:ENST00000262963:exon30:c.C5229T:p.D1743D,ENSG00000105426:ENST00000587303:exon33:c.C5289T:p.D1763D,ENSG00000105426:ENST00000357368:exon34:c.C5289T:p.D1763D,ENSG00000105426:ENST00000372412:exon34:c.C5292T:p.D1764D	Score=597;Name=lod=357	NA	19p13.3	NA	NA	NA	NA	rs1143699	0.09	0.09	0.104	0.100639	0.0994	NA	0.0807	0.2216	0.0562	0.09	NA	0.06	0.23	0.0931	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.668603	NA	NA	0.101744	0.185883	NA	0.065	NA	6.3724226
1015	6	31379109	31379109	G	A	exonic	MICA	NA	nonsynonymous SNV	MICA:NM_000247:exon3:c.G586A:p.E196K,MICA:NM_001177519:exon3:c.G586A:p.E196K	exonic	ENSG00000204520	NA	nonsynonymous SNV	ENSG00000204520:ENST00000449934:exon3:c.G586A:p.E196K	NA	NA	6p21.33	NA	NA	NA	NA	rs1051794	0.37	0.37	0.315	0.364617	0.3141	0.2996	0.4049	0.4796	0.2996	0.32	0.28	0.47	0.46	0.358	0.47	0.25	T	0.005	B	0.03	B	0.013	N	1.000	P	.	.	5.6	T	-0.914	T	0.001	T	0.078	0.074	4.401	-0.805	-0.322	-0.226	2.981	0.074063	NA	0.34	0.288812	0.419075	NA	0.341	NA	6.3724214
1015	15	42145049	42145049	C	T	exonic	SPTBN5	NA	synonymous SNV	SPTBN5:NM_016642:exon60:c.G10320A:p.E3440E	exonic	ENSG00000137877	NA	synonymous SNV	ENSG00000137877:ENST00000320955:exon60:c.G10320A:p.E3440E	Score=329;Name=lod=29	NA	15q15.1	NA	NA	NA	NA	rs55978013	0.05	0.05	0.047	0.0656949	0.0964	0.0159	0.1153	0.0061	0.1309	0.09	0.01	0.11	0.01	0.0996	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.683501	NA	NA	0.09838	0.022188	NA	0.087	NA	6.3722866
1015	3	180325487	180325487	T	C	exonic	TTC14	NA	synonymous SNV	TTC14:NM_001042601:exon10:c.T1224C:p.A408A,TTC14:NM_133462:exon10:c.T1224C:p.A408A	exonic	ENSG00000163728	NA	synonymous SNV	ENSG00000163728:ENST00000296015:exon10:c.T1224C:p.A408A,ENSG00000163728:ENST00000382584:exon10:c.T1224C:p.A408A,ENSG00000163728:ENST00000412756:exon10:c.T1224C:p.A408A,ENSG00000163728:ENST00000470669:exon10:c.T1224C:p.A408A	Score=663;Name=lod=657	NA	3q26.33	NA	NA	NA	NA	rs9858483	0.08	0.08	0.06	0.0696885	0.1044	NA	0.1167	0.0787	0.0603	0.12	NA	0.1	0.08	0.0932	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.148856	NA	NA	0.09697	0.069741	NA	0.051	NA	6.3720966
1015	17	7592560	7592560	C	T	exonic	WRAP53	NA	synonymous SNV	WRAP53:NM_018081:exon2:c.C450T:p.F150F,WRAP53:NM_001143990:exon3:c.C450T:p.F150F,WRAP53:NM_001143991:exon3:c.C450T:p.F150F,WRAP53:NM_001143992:exon3:c.C450T:p.F150F	exonic	ENSG00000141499	NA	synonymous SNV	ENSG00000141499:ENST00000316024:exon2:c.C450T:p.F150F,ENSG00000141499:ENST00000396463:exon3:c.C450T:p.F150F,ENSG00000141499:ENST00000431639:exon3:c.C450T:p.F150F,ENSG00000141499:ENST00000457584:exon3:c.C450T:p.F150F,ENSG00000141499:ENST00000498311:exon3:c.C450T:p.F150F	Score=340;Name=lod=32	NA	17p13.1	NA	NA	NA	NA	rs2287498	0.18	0.18	0.193	0.222244	0.0875	0.2996	0.17	0.2905	0.226	0.09	0.26	0.12	0.29	0.1331	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.022605	NA	NA	0.074302	0.240354	ID=COSM148182;OCCURENCE=1(stomach)	0.138	NA	6.3717646
1015	14	100996312	100996312	T	C	exonic	WDR25	NA	synonymous SNV	WDR25:NM_001161476:exon7:c.T1569C:p.Y523Y,WDR25:NM_024515:exon7:c.T1569C:p.Y523Y	exonic	ENSG00000176473	NA	synonymous SNV	ENSG00000176473:ENST00000542471:exon6:c.T798C:p.Y266Y,ENSG00000176473:ENST00000335290:exon7:c.T1569C:p.Y523Y,ENSG00000176473:ENST00000402312:exon7:c.T1569C:p.Y523Y,ENSG00000176473:ENST00000554998:exon7:c.T1569C:p.Y523Y	Score=371;Name=lod=43	NA	14q32.2	Score=857;Name=V$GATA1_03	NA	NA	NA	rs13065	0.65	0.65	0.656	0.641374	0.4155	0.6974	0.611	0.9705	0.3926	0.42	0.71	0.62	0.96	0.4878	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.434465	NA	NA	0.391628	0.879029	ID=COSM432668;OCCURENCE=1(breast)	0.594	NA	6.3717386
1015	15	101093955	101093955	A	G	ncRNA_exonic	PRKXP1	NA	NA	NA	ncRNA_exonic	ENSG00000259205	NA	NA	NA	Score=624;Name=lod=456	NA	15q26.3	NA	NA	Name=4	NA	rs62037118	0.25	0.25	0.216	0.26258	0.2952	0.0704	0.2017	0.4168	0.2618	0.28	0.08	0.23	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.019533	NA	NA	NA	NA	NA	0.326	NA	6.3714666
1015	4	122254014	122254014	A	G	exonic	QRFPR	NA	synonymous SNV	QRFPR:NM_198179:exon4:c.T759C:p.L253L	exonic	ENSG00000186867	NA	synonymous SNV	ENSG00000186867:ENST00000394427:exon4:c.T759C:p.L253L	Score=536;Name=lod=201	NA	4q27	NA	NA	NA	NA	rs55975435	0.09	0.09	0.08	0.0954473	0.1044	0.1151	0.0749	0.1021	0.0716	0.11	0.09	0.06	0.08	0.0895	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.861827	NA	NA	0.101744	0.081934	NA	0.051	NA	6.3710226
1015	6	31322559	31322559	G	A	intronic	HLA-B	NA	NA	NA	intronic	ENSG00000234745	NA	NA	NA	NA	Name=Beta-2 microglubulin plasma levels,HIV-1 control	6p21.33	NA	Name=Pol2-4H8	Name=4	NA	rs2523608	0.58	0.58	0.585	0.602835	0.6292	0.3909	0.6196	0.7005	0.6503	0.59	0.45	0.62	0.68	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.214464	NA	NA	NA	NA	NA	0.609	NA	6.3708
1015	8	81213670	81213670	G	T	intergenic	MIR5708,ZBTB10	dist=59962;dist=184184	NA	NA	ncRNA_exonic	ENSG00000213791	NA	NA	NA	Score=768;Name=lod=1759	NA	8q21.13	NA	Name=STAT3	Name=73	NA	rs7842724	0.65	0.65	0.652	0.654752	0.6292	0.6032	0.6052	0.8071	0.5634	0.62	0.59	0.59	0.81	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.061762	NA	NA	NA	NA	NA	0.681	NA	6.3708
1015	2	128757995	128757995	A	C	exonic	SAP130	NA	synonymous SNV	SAP130:NM_001145928:exon8:c.T981G:p.S327S,SAP130:NM_024545:exon8:c.T981G:p.S327S	exonic	ENSG00000136715	NA	synonymous SNV	ENSG00000136715:ENST00000259234:exon8:c.T903G:p.S301S,ENSG00000136715:ENST00000259235:exon8:c.T981G:p.S327S,ENSG00000136715:ENST00000357702:exon8:c.T981G:p.S327S	Score=601;Name=lod=370	NA	2q14.3	NA	NA	NA	NA	rs17015864	0.09	0.09	0.071	0.109625	0.0895	0.1379	0.111	0.0053	0.2413	0.09	0.13	0.09	0.01	0.1072	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.284324	1.284324	NA	0.099302	0.022015	NA	0.13	NA	6.3706646
1015	1	44451234	44451234	C	T	exonic	B4GALT2	NA	synonymous SNV	B4GALT2:NM_001005417:exon6:c.C909T:p.I303I,B4GALT2:NM_003780:exon6:c.C909T:p.I303I,B4GALT2:NM_030587:exon6:c.C996T:p.I332I	exonic	ENSG00000117411	NA	synonymous SNV	ENSG00000117411:ENST00000309519:exon6:c.C996T:p.I332I,ENSG00000117411:ENST00000356836:exon6:c.C909T:p.I303I,ENSG00000117411:ENST00000372324:exon6:c.C909T:p.I303I,ENSG00000117411:ENST00000434555:exon6:c.C711T:p.I237I	Score=643;Name=lod=549	NA	1p34.1	NA	NA	NA	NA	rs1061781	0.1	0.1	0.092	0.0934505	0.1004	0.1528	0.0778	0.0477	0.0982	0.1	0.14	0.08	0.06	0.0935	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.248112	1.248112	NA	0.102326	0.063096	ID=COSM146491;OCCURENCE=1(stomach)	0.087	NA	6.3704406
1015	7	99500899	99500899	T	C	exonic	TRIM4	NA	synonymous SNV	TRIM4:NM_033091:exon5:c.A783G:p.V261V,TRIM4:NM_033017:exon6:c.A861G:p.V287V	exonic	ENSG00000146833	NA	synonymous SNV	ENSG00000146833:ENST00000349062:exon5:c.A783G:p.V261V,ENSG00000146833:ENST00000354241:exon5:c.A783G:p.V261V,ENSG00000146833:ENST00000355947:exon6:c.A861G:p.V287V	NA	NA	7q22.1	NA	NA	NA	NA	rs2247762	0.31	0.31	0.293	0.321885	0.4235	0.2937	0.3357	0.1498	0.4693	0.44	0.27	0.37	0.14	0.4121	0.46	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.910	T	0.000	T	.	-1.375	0.026	-0.222	-0.051	-2.459	4.229	-1.374714	NA	NA	0.46093	0.211984	NA	0.261	NA	6.3701366
1015	2	232320581	232320581	T	G	ncRNA_exonic	SNORA75	NA	NA	NA	ncRNA_exonic	ENSG00000206885	NA	NA	NA	NA	NA	2q37.1	NA	Name=Pol2-4H8	Name=4	NA	rs13019380	0.07	0.07	0.06	0.0607029	0.1044	0.0883	0.0692	0.0045	0.0573	0.1	0.1	0.08	0.0041	0.0861	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.332609	3.332609	NA	0.106479	0.018836	NA	0.022	NA	6.3696876
1015	7	57188718	57188718	T	C	exonic	ZNF479	NA	nonsynonymous SNV	ZNF479:NM_033273:exon5:c.A404G:p.Y135C	exonic	ENSG00000185177	NA	nonsynonymous SNV	ENSG00000185177:ENST00000331162:exon5:c.A404G:p.Y135C	NA	NA	7p11.2	NA	NA	NA	NA	rs2191989	0.33	0.33	0.265	0.327676	0.2913	0.5427	0.379	0.115	0.3947	0.3	0.59	0.32	0.09	0.3388	0.59	1	T	0.0	B	0.0	B	.	.	1.000	P	-1.905	N	3.3	T	-0.953	T	0.000	T	0.042	-2.671	0	-1.1	-0.649	-0.701	0.203	-2.671338	NA	1	0.333616	0.147138	NA	0.036	NA	6.3696174
1015	X	102864568	102864568	G	A	exonic	TCEAL3	NA	synonymous SNV	TCEAL3:NM_001006933:exon3:c.G576A:p.R192R,TCEAL3:NM_032926:exon3:c.G576A:p.R192R	exonic	ENSG00000196507	NA	synonymous SNV	ENSG00000196507:ENST00000243286:exon3:c.G576A:p.R192R,ENSG00000196507:ENST00000372627:exon3:c.G576A:p.R192R,ENSG00000196507:ENST00000372628:exon3:c.G576A:p.R192R	Score=355;Name=lod=37	NA	Xq22.2	NA	NA	NA	NA	rs75427253	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2982	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.957237	NA	NA	NA	NA	NA	NA	NA	6.3684666
1015	X	102864565	102864565	G	A	exonic	TCEAL3	NA	synonymous SNV	TCEAL3:NM_001006933:exon3:c.G573A:p.Q191Q,TCEAL3:NM_032926:exon3:c.G573A:p.Q191Q	exonic	ENSG00000196507	NA	synonymous SNV	ENSG00000196507:ENST00000243286:exon3:c.G573A:p.Q191Q,ENSG00000196507:ENST00000372627:exon3:c.G573A:p.Q191Q,ENSG00000196507:ENST00000372628:exon3:c.G573A:p.Q191Q	Score=355;Name=lod=37	NA	Xq22.2	NA	NA	NA	NA	rs74490974	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2984	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.663647	NA	NA	NA	NA	NA	NA	NA	6.3682666
1015	3	123444785	123444785	A	T	intronic	MYLK	NA	NA	NA	intronic	ENSG00000065534	NA	NA	NA	Score=446;Name=lod=87	NA	3q21.1	NA	Name=CTCF	Name=9	NA	rs820329	0.12	0.12	0.089	0.0922524	0.2346	0.0069	0.1441	0.0401	0.0675	0.22	0.0017	0.18	0.04	0.1666	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.566266	NA	NA	0.230698	0.064231	NA	0.138	NA	6.368102
1015	2	159954175	159954175	C	T	exonic	TANC1	NA	nonsynonymous SNV	TANC1:NM_001145909:exon4:c.C88T:p.P30S,TANC1:NM_033394:exon4:c.C88T:p.P30S	exonic	ENSG00000115183	NA	nonsynonymous SNV	ENSG00000115183:ENST00000263635:exon4:c.C88T:p.P30S,ENSG00000115183:ENST00000454300:exon4:c.C88T:p.P30S	NA	NA	2q24.2	NA	NA	NA	NA	rs34588551	0.18	0.18	0.157	0.136382	0.3469	0.003	0.2493	0.0295	0.1217	0.33	0.0017	0.31	0.04	0.2578	0.36	0.32	T	0.004	B	0.015	B	0.223	N	1.000	P	0	N	-0.32	T	-0.989	T	0.000	T	0.025	0.57	7.078	0.726	0.127	0.420	2.285	0.569622	NA	0.58	0.360602	0.078626	NA	0.261	NA	6.3680314
1015	1	44595113	44595113	G	C	exonic	KLF17	NA	nonsynonymous SNV	KLF17:NM_173484:exon2:c.G170C:p.S57T	exonic	ENSG00000171872	NA	nonsynonymous SNV	ENSG00000171872:ENST00000372299:exon2:c.G170C:p.S57T	NA	NA	1p34.1	NA	NA	NA	NA	rs2429051	0.55	0.55	0.514	0.496406	0.6928	0.628	0.5159	0.2231	0.5143	0.68	0.66	0.54	0.23	0.6088	0.68	0.4	T	0.183	B	0.053	B	0.653	N	1.000	P	0.345	N	2.95	T	-0.990	T	0.000	T	0.034	1.501	10.97	-3.88	-0.722	-0.374	1.663	1.500537	1.500537	1	0.663953	0.297549	NA	0.457	NA	6.3677804
1015	10	121436068	121436068	T	G	exonic	BAG3	NA	synonymous SNV	BAG3:NM_004281:exon4:c.T1002G:p.P334P	exonic	ENSG00000151929	NA	synonymous SNV	ENSG00000151929:ENST00000369085:exon4:c.T1002G:p.P334P,ENSG00000151929:ENST00000450186:exon5:c.T825G:p.P275P	NA	NA	10q26.11	NA	NA	NA	NA	rs3858339	0.16	0.16	0.14	0.155751	0.0964	0.254	0.1744	0.1664	0.0879	0.09	0.25	0.13	0.16	0.1144	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.549583	NA	NA	0.08814	0.170676	NA	0.152	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=mult|single;CLNACC=RCV000037883.2|RCV000123815.1;CLNDSDB=.|.;CLNDSDBID=.|.	6.3677266
1015	16	720152	720152	T	C	exonic	RHOT2	NA	synonymous SNV	RHOT2:NM_138769:exon6:c.T306C:p.N102N	exonic	ENSG00000140983	NA	synonymous SNV	ENSG00000140983:ENST00000561929:exon5:c.T243C:p.N81N,ENSG00000140983:ENST00000315082:exon6:c.T306C:p.N102N,ENSG00000140983:ENST00000561983:exon6:c.T306C:p.N102N,ENSG00000140983:ENST00000562333:exon6:c.T306C:p.N102N,ENSG00000140983:ENST00000563134:exon6:c.T306C:p.N102N	Score=426;Name=lod=72	NA	16p13.3	NA	NA	NA	NA	rs3752487	0.17	0.17	0.138	0.177117	0.0795	0.2887	0.1484	0.2307	0.1104	0.07	0.29	0.1	0.23	0.1287	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.443185	NA	NA	0.091205	0.206645	NA	0.109	NA	6.3672616
1015	14	95081081	95081081	A	G	exonic	SERPINA3	NA	synonymous SNV	SERPINA3:NM_001085:exon2:c.A303G:p.K101K	exonic	ENSG00000196136	NA	synonymous SNV	ENSG00000196136:ENST00000393078:exon2:c.A303G:p.K101K,ENSG00000196136:ENST00000393080:exon2:c.A303G:p.K101K,ENSG00000196136:ENST00000467132:exon2:c.A303G:p.K101K,ENSG00000196136:ENST00000556968:exon2:c.A303G:p.K101K,ENSG00000196136:ENST00000553947:exon5:c.A378G:p.K126K	NA	NA	14q32.13	Score=842;Name=V$COUP_01	NA	NA	NA	rs17826465	0.05	0.05	0.035	0.0447284	0.1064	0.004	0.0648	0.0068	0.0603	0.1	0.0035	0.07	0.01	0.0819	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.781785	NA	NA	0.111512	0.025193	NA	0.007	NA	6.3668546
1015	19	36590329	36590329	T	C	exonic	WDR62	NA	nonsynonymous SNV	WDR62:NM_001083961:exon22:c.T2549C:p.L850S,WDR62:NM_173636:exon22:c.T2549C:p.L850S	exonic	ENSG00000075702	NA	nonsynonymous SNV	ENSG00000075702:ENST00000270301:exon22:c.T2549C:p.L850S,ENSG00000075702:ENST00000401500:exon22:c.T2549C:p.L850S	NA	NA	19q13.12	NA	NA	NA	NA	rs2285745	0.68	0.68	0.688	0.654153	0.675	0.6101	0.7061	0.7557	0.5041	0.68	0.62	0.68	0.76	0.6426	0.76	0.79	T	0.0	B	0.0	B	0.948	N	1.000	P	-1.445	N	0.86	T	-0.952	T	0.000	T	0.014	-0.893	0.452	4.25	0.610	0.702	7.517	-0.893325	NA	1	0.649302	0.720608	NA	0.601	NA	6.3664314
1015	6	29581041	29581041	A	G	exonic	GABBR1	NA	synonymous SNV	GABBR1:NM_021903:exon7:c.T1194C:p.S398S,GABBR1:NM_021904:exon11:c.T1359C:p.S453S,GABBR1:NM_001470:exon12:c.T1545C:p.S515S	exonic	ENSG00000204681	NA	synonymous SNV	ENSG00000204681:ENST00000355973:exon7:c.T1194C:p.S398S,ENSG00000204681:ENST00000377012:exon7:c.T1194C:p.S398S,ENSG00000204681:ENST00000377016:exon11:c.T1359C:p.S453S,ENSG00000204681:ENST00000494877:exon11:c.T1545C:p.S515S,ENSG00000204681:ENST00000376977:exon12:c.T1545C:p.S515S,ENSG00000204681:ENST00000377034:exon12:c.T1545C:p.S515S	Score=515;Name=lod=165	NA	6p22.1	NA	NA	NA	NA	rs29225	0.09	0.09	0.069	0.105631	0.0974	0.12	0.0807	0.0946	0.1319	0.08	0.12	0.08	0.09	0.0996	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.257555	1.257555	NA	0.103544	0.090397	NA	0.123	NA	6.3661226
1015	9	139911983	139911983	T	G	exonic	ABCA2	NA	synonymous SNV	ABCA2:NM_001606:exon17:c.A2373C:p.A791A,ABCA2:NM_212533:exon17:c.A2463C:p.A821A	exonic	ENSG00000107331	NA	synonymous SNV	ENSG00000107331:ENST00000488535:exon4:c.A414C:p.A138A,ENSG00000107331:ENST00000371605:exon16:c.A2370C:p.A790A,ENSG00000107331:ENST00000459850:exon16:c.A2460C:p.A820A,ENSG00000107331:ENST00000487109:exon16:c.A2460C:p.A820A,ENSG00000107331:ENST00000265662:exon17:c.A2373C:p.A791A,ENSG00000107331:ENST00000341511:exon17:c.A2373C:p.A791A	Score=612;Name=lod=411	NA	9q34.3	NA	NA	NA	NA	rs12348881	0.09	0.09	0.096	0.104433	0.1074	0.0337	0.0994	0.1853	0.0685	0.09	0.03	0.09	0.17	0.0958	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.225382	NA	NA	0.097995	0.190487	NA	0.188	NA	6.3654716
1015	3	107937408	107937408	C	T	exonic	IFT57	NA	synonymous SNV	IFT57:NM_018010:exon3:c.G468A:p.L156L	exonic	ENSG00000114446	NA	synonymous SNV	ENSG00000114446:ENST00000264538:exon3:c.G468A:p.L156L	Score=655;Name=lod=610	NA	3q13.13	NA	NA	NA	NA	rs1135897	0.09	0.09	0.077	0.0888578	0.1064	0.1052	0.0821	0.0658	0.09	0.1	0.1	0.09	0.05	0.0897	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.072866	NA	NA	0.105257	0.066046	NA	0.072	NA	6.3653096
1015	6	29581113	29581113	A	G	exonic	GABBR1	NA	synonymous SNV	GABBR1:NM_021903:exon7:c.T1122C:p.S374S,GABBR1:NM_021904:exon11:c.T1287C:p.S429S,GABBR1:NM_001470:exon12:c.T1473C:p.S491S	exonic	ENSG00000204681	NA	synonymous SNV	ENSG00000204681:ENST00000355973:exon7:c.T1122C:p.S374S,ENSG00000204681:ENST00000377012:exon7:c.T1122C:p.S374S,ENSG00000204681:ENST00000377016:exon11:c.T1287C:p.S429S,ENSG00000204681:ENST00000494877:exon11:c.T1473C:p.S491S,ENSG00000204681:ENST00000376977:exon12:c.T1473C:p.S491S,ENSG00000204681:ENST00000377034:exon12:c.T1473C:p.S491S	NA	NA	6p22.1	Score=825;Name=V$PAX5_01	NA	NA	NA	rs17854216	0.1	0.1	0.068	0.108826	0.0974	0.122	0.0807	0.0946	0.1462	0.09	0.12	0.09	0.09	0.1006	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.26274	NA	NA	0.103582	0.090007	NA	0.123	NA	6.3650846
1015	12	1902905	1902905	G	A	exonic	CACNA2D4	NA	synonymous SNV	CACNA2D4:NM_172364:exon38:c.C3330T:p.G1110G	exonic	ENSG00000151062	NA	synonymous SNV	ENSG00000151062:ENST00000538450:exon11:c.C720T:p.G240G,ENSG00000151062:ENST00000538027:exon12:c.C765T:p.G255G,ENSG00000151062:ENST00000587995:exon37:c.C3255T:p.G1085G,ENSG00000151062:ENST00000382722:exon38:c.C3330T:p.G1110G,ENSG00000151062:ENST00000588077:exon38:c.C3138T:p.G1046G	NA	NA	12p13.33	Score=767;Name=V$PAX5_02	NA	NA	NA	rs33912216	0.11	0.11	0.085	0.122404	0.1044	0.0774	0.2478	0.1218	0.0992	0.09	0.05	0.23	0.13	0.1115	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.446206	NA	NA	0.085728	0.120879	NA	0.043	NA	6.3650386
1016	7	150940867	150940867	G	A	intronic	SMARCD3	NA	NA	NA	intronic	ENSG00000082014	NA	NA	NA	Score=697;Name=lod=904	NA	7q36.1	Score=820;Name=V$EVI1_04	NA	Name=18	NA	rs219229	0.22	0.22	0.226	0.260783	0.3111	0.124	0.2262	0.1823	0.4806	0.31	0.12	0.24	0.21	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.071183	2.071183	NA	0.324953	0.232659	NA	0.21	NA	6.363947
1016	3	10312507	10312507	A	G	exonic	TATDN2	NA	synonymous SNV	TATDN2:NM_014760:exon4:c.A1641G:p.L547L	exonic	ENSG00000157014,ENSG00000272410	NA	synonymous SNV	ENSG00000272410:ENST00000437082:exon3:c.A1470G:p.L490L,ENSG00000157014:ENST00000287652:exon4:c.A1641G:p.L547L,ENSG00000157014:ENST00000448281:exon4:c.A1641G:p.L547L	Score=483;Name=lod=122	NA	3p25.3	NA	NA	NA	NA	rs2075353	0.13	0.13	0.117	0.111821	0.1034	0.2857	0.0576	0.0113	0.1155	0.1	0.29	0.06	0.02	0.1059	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.15607	NA	NA	0.094884	0.02769	NA	0.116	NA	6.3624826
1016	8	129162433	129162433	G	T	ncRNA_exonic	MIR1208	NA	NA	NA	ncRNA_exonic	ENSG00000221261	NA	NA	NA	NA	NA	8q24.21	NA	Name=JunD,eGFP-JunB,FOSL2,c-Fos,c-Jun,Egr-1,eGFP-FOS,ZBTB7A_(SC-34508),GATA2_(CG2-96),eGFP-JunD,Pol2,FOSL1_(SC-183),GR,p300	Name=60	NA	rs2648841	0.19	0.19	0.165	0.186302	0.0765	0.4345	0.1383	0.0794	0.2219	0.07	0.45	0.17	0.1	0.139	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.303116	NA	NA	0.089056	0.082589	NA	0.109	NA	6.3621106
1016	2	29092850	29092850	G	T	exonic	TRMT61B	NA	synonymous SNV	TRMT61B:NM_017910:exon1:c.C294A:p.S98S	exonic	ENSG00000171103	NA	synonymous SNV	ENSG00000171103:ENST00000306108:exon1:c.C294A:p.S98S,ENSG00000171103:ENST00000439947:exon1:c.C294A:p.S98S	NA	NA	2p23.2	NA	Name=ZNF263	Name=14	NA	rs4666122	0.53	0.53	0.489	0.505192	0.4115	0.7817	0.5735	0.3933	0.4192	0.44	0.76	0.54	0.39	0.4692	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.719382	NA	NA	0.424302	0.384476	NA	0.558	NA	6.3616646
1016	21	33840095	33840095	C	T	exonic	EVA1C	NA	synonymous SNV	EVA1C:NM_058187:exon4:c.C573T:p.Y191Y	exonic	ENSG00000166979	NA	synonymous SNV	ENSG00000166979:ENST00000457807:exon2:c.C252T:p.Y84Y,ENSG00000166979:ENST00000300255:exon4:c.C573T:p.Y191Y,ENSG00000166979:ENST00000382699:exon4:c.C573T:p.Y191Y,ENSG00000166979:ENST00000401402:exon4:c.C573T:p.Y191Y,ENSG00000166979:ENST00000412833:exon4:c.C288T:p.Y96Y	NA	NA	21q22.11	Score=806;Name=V$CMYB_01	NA	NA	NA	rs8130653	0.06	0.06	0.055	0.0652955	0.1173	0.0149	0.062	0.0439	0.0951	0.11	0.01	0.07	0.04	0.0829	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.537545	NA	NA	0.104884	0.047889	NA	0.043	NA	6.3615826
1016	7	100610069	100610069	C	T	intergenic	ACHE,MUC12	dist=116528;dist=2835	NA	NA	exonic	ENSG00000169894	NA	nonsynonymous SNV	ENSG00000169894:ENST00000422757:exon8:c.C850T:p.H284Y,ENSG00000169894:ENST00000319509:exon10:c.C2554T:p.H852Y	NA	NA	7q22.1	NA	NA	Name=16	NA	rs10258821	NA	NA	0.534	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4725	0.5	1	T	0.035	B	0.048	B	.	.	1.000	N	1.5	L	3.17	T	-0.931	T	0.022	T	0.073	0.494	6.681	-0.081	-0.020	-0.710	5.373	0.49425	NA	0.29	NA	NA	NA	0.428	NA	6.3608334
1016	2	29092679	29092679	T	C	exonic	TRMT61B	NA	synonymous SNV	TRMT61B:NM_017910:exon1:c.A465G:p.E155E	exonic	ENSG00000171103	NA	synonymous SNV	ENSG00000171103:ENST00000306108:exon1:c.A465G:p.E155E,ENSG00000171103:ENST00000439947:exon1:c.A465G:p.E155E	Score=358;Name=lod=38	NA	2p23.2	NA	Name=ZNF263	NA	NA	rs4233729	0.53	0.53	0.489	0.505192	0.4115	0.7817	0.5735	0.3933	0.4192	0.44	0.76	0.54	0.39	0.4701	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.119199	NA	NA	0.424302	0.384249	NA	0.572	NA	6.3607646
1016	2	234854550	234854550	G	C	exonic	TRPM8	NA	synonymous SNV	TRPM8:NM_024080:exon7:c.G750C:p.L250L	exonic	ENSG00000144481	NA	synonymous SNV	ENSG00000144481:ENST00000324695:exon7:c.G750C:p.L250L,ENSG00000144481:ENST00000444298:exon7:c.G750C:p.L250L	Score=536;Name=lod=202	NA	2q37.1	NA	NA	NA	NA	rs11562975	0.11	0.11	0.092	0.129992	0.0835	0.2093	0.1599	0.0174	0.227	0.09	0.2	0.14	0.03	0.1265	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.811103	NA	NA	0.097558	0.034044	NA	0.065	NA	6.3591086
1016	19	47969394	47969394	G	A	exonic	SLC8A2	NA	synonymous SNV	SLC8A2:NM_015063:exon2:c.C267T:p.I89I	exonic	ENSG00000118160	NA	synonymous SNV	ENSG00000118160:ENST00000236877:exon2:c.C267T:p.I89I,ENSG00000118160:ENST00000597014:exon2:c.C33T:p.I11I	Score=592;Name=lod=340	NA	19q13.32	NA	NA	NA	NA	rs12459087	0.06	0.06	0.044	0.0621006	0.1054	0.0655	0.0634	0.0015	0.0951	0.1	0.06	0.06	NA	0.0932	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.151774	NA	NA	0.109302	0.020881	NA	0.109	NA	6.3587646
1016	19	4512409	4512409	T	C	exonic	PLIN4	NA	synonymous SNV	PLIN4:NM_001080400:exon3:c.A1521G:p.V507V	exonic	ENSG00000167676	NA	synonymous SNV	ENSG00000167676:ENST00000301286:exon3:c.A1521G:p.V507V	Score=333;Name=lod=30	NA	19p13.3	NA	NA	NA	NA	rs10410197	0.1	0.1	0.087	0.0948482	0.1103	0.002	0.0879	0.1982	0.0399	0.11	0.0035	0.1	0.2	0.0907	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.367705	NA	NA	0.107297	0.162488	NA	0.08	NA	6.3583696
1016	9	131767668	131767668	A	C	exonic	NUP188	NA	synonymous SNV	NUP188:NM_015354:exon40:c.A4596C:p.S1532S	exonic	ENSG00000095319	NA	synonymous SNV	ENSG00000095319:ENST00000372577:exon40:c.A4596C:p.S1532S	Score=417;Name=lod=66	NA	9q34.11	NA	Name=ZNF274	NA	NA	rs2287363	0.47	0.47	0.453	0.451677	0.4672	0.4067	0.4957	0.4728	0.4223	0.47	0.39	0.49	0.54	0.4313	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.848509	NA	NA	0.409884	0.455515	NA	0.572	NA	6.3582826
1016	11	73021084	73021084	C	T	exonic	ARHGEF17	NA	synonymous SNV	ARHGEF17:NM_014786:exon1:c.C1401T:p.I467I	exonic	ENSG00000110237	NA	synonymous SNV	ENSG00000110237:ENST00000263674:exon1:c.C1401T:p.I467I	NA	NA	11q13.4	Score=923;Name=V$LMO2COM_02	NA	NA	NA	rs3741149	0.14	0.14	0.128	0.156949	0.0934	0.0437	0.0764	0.3918	0.0787	0.1	0.04	0.07	0.37	0.1151	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.332199	NA	NA	0.09993	0.329091	NA	0.196	NA	6.3582366
1016	11	62381106	62381106	G	C	exonic	ROM1	NA	nonsynonymous SNV	ROM1:NM_000327:exon1:c.G353C:p.G118A	exonic	ENSG00000149489	NA	nonsynonymous SNV	ENSG00000149489:ENST00000278833:exon1:c.G353C:p.G118A	NA	NA	11q12.3	NA	NA	Name=5	NA	rs1799959	0.93	0.93	0.92	0.935304	0.995	1	0.9755	0.7723	0.999	0.99	1	0.97	0.74	0.9822	1	1	T	0.0	B	0.001	B	0.004	N	1.000	P	-1.31	N	-1.04	T	-0.932	T	0.000	T	0.132	-2.342	0.004	3.72	0.564	0.103	11.333	-2.342039	NA	1	0.997906	0.822434	NA	0.899	NA	6.3582274
1016	1	17017717	17017717	C	T	ncRNA_exonic	ESPNP	NA	NA	NA	ncRNA_exonic	ENSG00000268869	NA	NA	NA	Score=586;Name=lod=321	NA	1p36.13	Score=919;Name=V$AREB6_02	NA	NA	NA	rs12561804	NA	NA	0.184	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3086	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.011497	NA	NA	NA	NA	NA	0.196	NA	6.3580666
1016	15	35044757	35044757	C	T	exonic	GJD2	NA	synonymous SNV	GJD2:NM_020660:exon2:c.G888A:p.E296E	exonic	ENSG00000159248	NA	synonymous SNV	ENSG00000159248:ENST00000290374:exon2:c.G888A:p.E296E	Score=718;Name=lod=1099	NA	15q14	NA	NA	NA	NA	rs34964522	0.05	0.05	0.042	0.0377396	0.1093	NA	0.0605	0.0038	0.0327	0.12	NA	0.05	0.002	0.0836	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.093132	NA	NA	0.115752	0.02726	NA	0.014	NA	6.3580146
1016	1	240371106	240371106	C	T	exonic	FMN2	NA	synonymous SNV	FMN2:NM_020066:exon5:c.C2994T:p.P998P	exonic	ENSG00000155816	NA	synonymous SNV	ENSG00000155816:ENST00000319653:exon5:c.C2994T:p.P998P	Score=300;Name=lod=22	NA	1q43	NA	NA	NA	NA	rs11586155	0.21	0.21	NA	NA	NA	NA	NA	NA	NA	0.31	0.11	0.2	0.19	0.3088	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.859617	NA	NA	NA	NA	NA	NA	NA	6.3578666
1016	5	167933156	167933156	A	G	exonic	RARS	NA	synonymous SNV	RARS:NM_002887:exon10:c.A1188G:p.L396L	exonic	ENSG00000113643	NA	synonymous SNV	ENSG00000113643:ENST00000538719:exon9:c.A570G:p.L190L,ENSG00000113643:ENST00000231572:exon10:c.A1188G:p.L396L	NA	NA	5q34	Score=759;Name=V$MEF2_04	NA	NA	NA	rs61744940	0.06	0.06	0.036	0.0379393	0.1163	0.001	0.0634	0.0068	0.0194	0.12	0.0017	0.07	0.01	0.0841	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.760232	NA	NA	0.108488	0.022696	NA	NA	NA	6.3577786
1016	14	73957772	73957772	A	G	exonic	C14orf169	NA	unknown	UNKNOWN	ncRNA_exonic	ENSG00000170468,ENSG00000255242	NA	NA	NA	Score=361;Name=lod=39	NA	14q24.3	NA	Name=TAF1,POU2F2,Pol2(phosphoS2),Pol2,Mxi1_(bHLH),E2F6,YY1_(C-20),ELF1_(SC-631),Max,Oct-2,Pol2(b),Ini1,NANOG_(SC-33759),YY1,Pol2-4H8,Sin3Ak-20,HEY1,NFKB,CCNT2,c-Myc,TCF12,TBP	Name=3	NA	rs10144469	0.81	0.81	0.798	NA	NA	NA	NA	NA	NA	0.73	0.82	0.81	0.91	0.7595	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.183716	NA	NA	0.71663	0.851991	NA	0.319	NA	6.3572033
1016	22	31838085	31838085	G	A	exonic	EIF4ENIF1	NA	synonymous SNV	EIF4ENIF1:NM_001164502:exon15:c.C1704T:p.S568S,EIF4ENIF1:NM_001164501:exon17:c.C2226T:p.S742S,EIF4ENIF1:NM_019843:exon17:c.C2226T:p.S742S	exonic	ENSG00000184708	NA	synonymous SNV	ENSG00000184708:ENST00000382180:exon9:c.C1191T:p.S397S,ENSG00000184708:ENST00000344710:exon15:c.C1704T:p.S568S,ENSG00000184708:ENST00000397523:exon15:c.C2154T:p.S718S,ENSG00000184708:ENST00000330125:exon17:c.C2226T:p.S742S,ENSG00000184708:ENST00000397525:exon17:c.C2226T:p.S742S	Score=340;Name=lod=32	NA	22q12.2	Score=932;Name=V$TCF11_01	NA	NA	NA	rs5997988	0.31	0.31	0.296	0.323682	0.4583	0.0377	0.3026	0.4039	0.3865	0.45	0.03	0.35	0.39	0.3918	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.786116	NA	NA	0.459651	0.422833	NA	0.348	NA	6.3569156
1016	19	39196745	39196745	C	T	exonic	ACTN4	NA	synonymous SNV	ACTN4:NM_004924:exon5:c.C546T:p.N182N	exonic	ENSG00000130402	NA	synonymous SNV	ENSG00000130402:ENST00000252699:exon5:c.C546T:p.N182N	Score=563;Name=lod=260	NA	19q13.2	Score=901;Name=V$CREBP1CJUN_01	NA	NA	NA	rs3745859	0.38	0.38	0.38	0.339257	0.4364	0.4276	0.2853	0.2322	0.3313	0.44	0.47	0.31	0.24	0.4105	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.991592	NA	NA	0.462907	0.254653	NA	0.399	NA	6.3568596
1016	19	53740822	53740822	T	C	exonic	ZNF677	NA	synonymous SNV	ZNF677:NM_182609:exon5:c.A1158G:p.E386E	exonic	ENSG00000197928	NA	synonymous SNV	ENSG00000197928:ENST00000333952:exon5:c.A1158G:p.E386E,ENSG00000197928:ENST00000598513:exon5:c.A1158G:p.E386E	NA	NA	19q13.42	NA	Name=SETDB1,ZNF274,KAP1	Name=3	NA	rs8113436	0.48	0.48	0.455	0.464856	0.4324	0.752	0.4294	0.2148	0.5654	0.43	0.75	0.44	0.26	0.4589	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.113127	NA	NA	0.419186	0.243305	ID=COSM148728;OCCURENCE=1(stomach)	0.399	NA	6.3561806
1016	3	48474249	48474249	A	G	exonic	CCDC51	NA	synonymous SNV	CCDC51:NM_001256964:exon4:c.T805C:p.L269L,CCDC51:NM_001256965:exon4:c.T478C:p.L160L,CCDC51:NM_001256966:exon4:c.T478C:p.L160L,CCDC51:NM_001256967:exon4:c.T478C:p.L160L,CCDC51:NM_001256968:exon4:c.T478C:p.L160L,CCDC51:NM_001256969:exon4:c.T478C:p.L160L,CCDC51:NM_024661:exon4:c.T805C:p.L269L	exonic	ENSG00000164051	NA	synonymous SNV	ENSG00000164051:ENST00000395694:exon4:c.T805C:p.L269L,ENSG00000164051:ENST00000395696:exon4:c.T805C:p.L269L,ENSG00000164051:ENST00000412398:exon4:c.T478C:p.L160L,ENSG00000164051:ENST00000442740:exon4:c.T478C:p.L160L,ENSG00000164051:ENST00000447018:exon4:c.T478C:p.L160L	NA	NA	3p21.31	NA	Name=CTCF,Rad21,IRF4_(M-17)	Name=64	NA	rs2279077	0.34	0.34	0.336	0.319888	0.4632	0.3135	0.2882	0.2413	0.3078	0.45	0.29	0.3	0.24	0.3817	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.133815	NA	NA	0.465605	0.269153	NA	0.399	NA	6.3561616
1016	17	17179481	17179481	G	A	intronic	COPS3	NA	NA	NA	exonic	ENSG00000141030	NA	synonymous SNV	ENSG00000141030:ENST00000492672:exon2:c.C72T:p.S24S,ENSG00000141030:ENST00000578317:exon2:c.C72T:p.S24S	Score=647;Name=lod=570	NA	17p11.2	NA	Name=GR	Name=4	NA	rs4985761	0.46	0.46	0.407	0.400559	0.5089	0.6548	0.5173	0.0832	0.3732	0.53	0.65	0.48	0.1	0.4708	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.08971	2.08971	NA	0.497791	0.146391	NA	0.391	NA	6.3558423
1016	16	2162887	2162887	A	G	exonic	PKD1	NA	synonymous SNV	PKD1:NM_000296:exon13:c.T3063C:p.G1021G,PKD1:NM_001009944:exon13:c.T3063C:p.G1021G	exonic	ENSG00000008710	NA	synonymous SNV	ENSG00000008710:ENST00000262304:exon13:c.T3063C:p.G1021G,ENSG00000008710:ENST00000423118:exon13:c.T3063C:p.G1021G	Score=374;Name=lod=44	NA	16p13.3	NA	NA	NA	NA	rs2369068	0.16	0.16	0.15	0.182907	0.0944	NA	0.1427	0.5356	0.0143	0.09	NA	0.15	0.46	0.1105	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.560237	NA	NA	0.10593	0.460191	NA	0.181	NA	6.3558366
1016	4	138449683	138449683	A	G	exonic	PCDH18	NA	synonymous SNV	PCDH18:NM_019035:exon3:c.T2689C:p.L897L	exonic	ENSG00000189184	NA	synonymous SNV	ENSG00000189184:ENST00000344876:exon3:c.T2689C:p.L897L,ENSG00000189184:ENST00000412923:exon3:c.T2686C:p.L896L,ENSG00000189184:ENST00000511115:exon3:c.T229C:p.L77L,ENSG00000189184:ENST00000507846:exon4:c.T2026C:p.L676L,ENSG00000189184:ENST00000510305:exon4:c.T322C:p.L108L	Score=494;Name=lod=136	NA	4q28.3	NA	Name=GATA-2	NA	NA	rs10018837	0.54	0.54	0.585	0.570487	0.4155	0.5079	0.4496	0.8994	0.4356	0.41	0.49	0.42	0.89	0.4742	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.544319	1.544319	NA	0.42186	0.802315	NA	0.696	NA	6.3551066
1016	20	56137798	56137798	G	A	exonic	PCK1	NA	synonymous SNV	PCK1:NM_002591:exon4:c.G453A:p.S151S	exonic	ENSG00000124253	NA	synonymous SNV	ENSG00000124253:ENST00000535860:exon2:c.G57A:p.S19S,ENSG00000124253:ENST00000319441:exon4:c.G453A:p.S151S	NA	NA	20q13.31	Score=774;Name=V$PPARA_01	Name=HEY1	NA	NA	rs1062600	0.3	0.3	0.29	0.295128	0.4732	0.0308	0.3141	0.3101	0.3507	0.47	0.03	0.34	0.3	0.3788	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.506946	NA	NA	0.459651	0.321153	NA	0.384	NA	6.3550156
1017	1	155912486	155912486	T	C	exonic	RXFP4	NA	nonsynonymous SNV	RXFP4:NM_181885:exon1:c.T986C:p.L329S	exonic	ENSG00000173080	NA	nonsynonymous SNV	ENSG00000173080:ENST00000368318:exon1:c.T986C:p.L329S	NA	NA	1q22	NA	Name=Pol2	Name=39	NA	rs2152051	0.95	0.95	0.926	0.924121	1	0.999	0.9813	0.7383	0.9796	1	1	0.98	0.77	0.9797	1	0.95	T	0.0	B	0.0	B	0.513	N	1.000	P	-0.345	N	1.25	T	-0.943	T	0.009	T	0.089	0.989	9.037	1.86	0.260	-0.036	4.614	0.988773	NA	0.57	0.999419	0.815395	NA	0.928	NA	6.3542144
1017	17	67513003	67513003	C	A	exonic	MAP2K6	NA	synonymous SNV	MAP2K6:NM_002758:exon3:c.C91A:p.R31R	exonic	ENSG00000108984	NA	synonymous SNV	ENSG00000108984:ENST00000359094:exon3:c.C91A:p.R31R,ENSG00000108984:ENST00000590474:exon3:c.C91A:p.R31R,ENSG00000108984:ENST00000588110:exon4:c.C100A:p.R34R	Score=581;Name=lod=306	NA	17q24.3	NA	Name=YY1	NA	NA	rs1133228	0.43	0.43	0.417	0.427316	0.4374	0.4573	0.366	0.4206	0.4387	0.44	0.44	0.37	0.43	0.4364	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.944226	NA	NA	0.439302	0.412619	NA	0.442	NA	6.3535646
1017	6	32798548	32798548	G	A	exonic	TAP2	NA	synonymous SNV	TAP2:NM_018833:exon8:c.C1308T:p.N436N	exonic	ENSG00000204267,ENSG00000250264	NA	synonymous SNV	ENSG00000204267:ENST00000374897:exon8:c.C1308T:p.N436N,ENSG00000204267:ENST00000374899:exon8:c.C1308T:p.N436N,ENSG00000250264:ENST00000452392:exon8:c.C1308T:p.N436N	Score=441;Name=lod=83	NA	6p21.32	NA	NA	NA	NA	rs1042116	0.06	0.06	0.046	0.0427316	0.1183	0.0188	0.0634	0.0068	0.0235	0.11	0.03	0.07	0.01	0.0873	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.689397	NA	NA	0.108158	0.029782	NA	0.014	NA	6.3529086
1017	12	9833524	9833524	C	G	exonic	CLEC2D	NA	nonsynonymous SNV	CLEC2D:NM_001004419:exon2:c.C67G:p.L23V,CLEC2D:NM_001197318:exon2:c.C67G:p.L23V,CLEC2D:NM_013269:exon2:c.C67G:p.L23V	exonic	ENSG00000069493	NA	nonsynonymous SNV	ENSG00000069493:ENST00000430909:exon1:c.C4G:p.L2V,ENSG00000069493:ENST00000261340:exon2:c.C67G:p.L23V,ENSG00000069493:ENST00000290855:exon2:c.C67G:p.L23V,ENSG00000069493:ENST00000325960:exon2:c.C67G:p.L23V,ENSG00000069493:ENST00000444971:exon2:c.C67G:p.L23V,ENSG00000069493:ENST00000479877:exon2:c.C67G:p.L23V,ENSG00000069493:ENST00000543300:exon2:c.C67G:p.L23V	NA	NA	12p13.31	NA	NA	NA	NA	rs3764022	0.29	0.29	0.278	0.292332	0.338	0.3641	0.281	0.1006	0.4387	0.34	0.34	0.33	0.1	0.3187	0.34	.	.	0.097	B	0.009	B	.	.	1.000	P	0.345	N	4.58	T	-0.896	T	0.000	T	0.057	-0.083	3.592	0.395	0.141	-0.327	3.572	-0.08337	NA	0.11	0.324261	0.148047	NA	0.362	NA	6.3523724
1017	14	24649669	24649669	C	T	exonic	IPO4	NA	synonymous SNV	IPO4:NM_024658:exon30:c.G3225A:p.Q1075Q	exonic	ENSG00000196497	NA	synonymous SNV	ENSG00000196497:ENST00000354464:exon30:c.G3225A:p.Q1075Q	Score=454;Name=lod=93	NA	14q12	NA	NA	NA	NA	rs2273912	0.13	0.13	0.1	0.133187	0.0865	0.1022	0.2983	0.1104	0.1268	0.09	0.14	0.24	0.1	0.135	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.514259	NA	NA	0.093001	0.09557	ID=COSM147752;OCCURENCE=1(stomach)	0.109	NA	6.3521656
1017	19	53848779	53848779	T	C	exonic	ZNF845	NA	synonymous SNV	ZNF845:NM_138374:exon3:c.T36C:p.D12D	exonic	ENSG00000213799	NA	synonymous SNV	ENSG00000213799:ENST00000458035:exon3:c.T36C:p.D12D,ENSG00000213799:ENST00000601857:exon3:c.T36C:p.D12D,ENSG00000213799:ENST00000595091:exon4:c.T36C:p.D12D	Score=340;Name=lod=32	NA	19q13.42	NA	NA	NA	NA	rs75887836	0.12	0.12	0.114	0.134385	0.1083	0.1617	0.0893	0.1536	0.1391	0.11	0.14	0.09	0.16	0.107	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.043543	NA	NA	0.099309	0.140173	NA	0.167	NA	6.3520576
1017	6	44280812	44280812	C	T	intronic	AARS2	NA	NA	NA	intronic	ENSG00000124608,ENSG00000272442	NA	NA	NA	Score=493;Name=lod=134	NA	6p21.1	Score=847;Name=V$AP4_01	Name=ZBTB7A_(SC-34508),Pol2,NRSF,Pol2(b)	Name=20	NA	rs167772	0.47	0.47	0.453	0.453275	0.5507	0.3968	0.6037	0.3495	0.4448	0.55	0.41	0.61	0.3	0.5333	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.209939	NA	NA	0.564085	0.367227	NA	0.507	NA	6.351915
1017	17	39635194	39635194	G	A	exonic	KRT35	NA	synonymous SNV	KRT35:NM_002280:exon4:c.C765T:p.D255D	exonic	ENSG00000197079	NA	synonymous SNV	ENSG00000197079:ENST00000246639:exon4:c.C675T:p.D225D,ENSG00000197079:ENST00000393989:exon4:c.C765T:p.D255D	Score=429;Name=lod=74	NA	17q21.2	NA	NA	NA	NA	rs12936485	0.08	0.08	0.068	0.0678914	0.1183	0.001	0.085	0.0537	0.092	0.12	0.0017	0.1	0.07	0.0948	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.584272	NA	NA	0.103023	0.054368	NA	0.094	NA	6.3505436
1017	1	33646950	33646950	A	G	exonic	TRIM62	NA	synonymous SNV	TRIM62:NM_018207:exon1:c.T84C:p.H28H	exonic	ENSG00000116525	NA	synonymous SNV	ENSG00000116525:ENST00000291416:exon1:c.T84C:p.H28H	Score=787;Name=lod=2104	NA	1p35.1	NA	Name=TAF1,HA-E2F1,ZNF263	Name=142	NA	rs622407	0.77	0.77	0.753	0.749601	0.7545	0.7946	0.7954	0.7095	0.7198	0.75	0.78	0.81	0.73	0.7747	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.411646	NA	NA	0.78715	0.7669	NA	0.391	NA	6.3503166
1017	2	174055646	174055646	T	C	exonic	ZAK	NA	synonymous SNV	ZAK:NM_016653:exon6:c.T439C:p.L147L,ZAK:NM_133646:exon6:c.T439C:p.L147L	exonic	ENSG00000091436	NA	synonymous SNV	ENSG00000091436:ENST00000431503:exon5:c.T136C:p.L46L,ENSG00000091436:ENST00000338983:exon6:c.T439C:p.L147L,ENSG00000091436:ENST00000375213:exon6:c.T439C:p.L147L,ENSG00000091436:ENST00000409176:exon6:c.T439C:p.L147L,ENSG00000091436:ENST00000539448:exon6:c.T439C:p.L147L	Score=528;Name=lod=186	NA	2q31.1	NA	NA	NA	NA	rs35853276	0.13	0.13	0.142	0.142772	0.1103	NA	0.0821	0.3071	0.1442	0.11	NA	0.11	0.33	0.1061	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.152458	NA	NA	0.101699	0.242397	NA	0.239	NA	6.3485676
1017	4	89577214	89577214	A	T	intronic	HERC3	NA	NA	NA	exonic	ENSG00000138641	NA	nonsynonymous SNV	ENSG00000138641:ENST00000407637:exon9:c.A1097T:p.K366M	NA	NA	4q22.1	NA	NA	NA	NA	rs2972040	0.41	0.41	0.433	0.447085	0.2425	0.4861	0.2507	0.652	0.4796	0.26	0.51	0.25	0.65	0.3311	0.65	.	.	0.0	B	0.0	B	.	.	1.000	P	.	.	0.9	T	-0.954	T	0.000	T	0.076	1.156	9.708	3.74	0.368	0.086	6.481	1.156181	NA	0.01	0.244535	0.592601	NA	0.42	NA	6.3485317
1017	6	56471402	56471402	G	A	ncRNA_intronic	RNU6-71P	NA	NA	NA	exonic	ENSG00000151914	NA	nonsynonymous SNV	ENSG00000151914:ENST00000439203:exon26:c.C6413T:p.P2138L,ENSG00000151914:ENST00000446842:exon26:c.C6413T:p.P2138L,ENSG00000151914:ENST00000312431:exon36:c.C7391T:p.P2464L,ENSG00000151914:ENST00000361203:exon36:c.C7391T:p.P2464L,ENSG00000151914:ENST00000370769:exon36:c.C7391T:p.P2464L,ENSG00000151914:ENST00000370754:exon39:c.C7925T:p.P2642L	NA	NA	6p12.1	NA	Name=Pol2	NA	NA	rs9382658	0.37	0.37	0.379	0.354233	0.3807	0.2431	0.3775	0.4985	0.2301	0.36	0.24	0.4	0.52	0.3626	0.52	1	T	0.0	B	0.001	B	0.379	N	1.000	P	.	.	1.26	T	-1.027	T	0.052	T	0.056	0.306	5.658	-0.669	0.005	0.250	1.338	0.306073	NA	1	0.408803	0.485437	NA	0.442	NA	6.347897
1017	3	151463421	151463421	G	T	exonic	AADACL2	NA	nonsynonymous SNV	AADACL2:NM_207365:exon4:c.G556T:p.A186S	exonic	ENSG00000197953	NA	nonsynonymous SNV	ENSG00000197953:ENST00000356517:exon4:c.G556T:p.A186S	NA	NA	3q25.1	NA	NA	NA	NA	rs1972977	0.69	0.69	0.655	0.706669	0.668	0.624	0.6455	0.823	0.7178	0.67	0.62	0.65	0.81	0.6726	0.81	1	T	0.0	B	0.006	B	0.024	N	1.000	P	0.635	N	0.26	T	-0.886	T	0.000	T	0.093	-2.301	0.004	-3.34	-0.573	0.113	18.971	-2.300516	NA	1	0.644917	0.802088	NA	0.725	NA	6.3478164
1017	3	113955320	113955320	C	T	exonic	ZNF80	NA	nonsynonymous SNV	ZNF80:NM_007136:exon1:c.G602A:p.R201H	exonic	ENSG00000174255	NA	nonsynonymous SNV	ENSG00000174255:ENST00000308095:exon1:c.G602A:p.R201H,ENSG00000174255:ENST00000482457:exon1:c.G602A:p.R201H	NA	NA	3q13.31	NA	NA	NA	NA	rs6438191	0.68	0.68	0.693	0.692692	0.6849	0.5427	0.6009	0.8487	0.7096	0.68	0.57	0.59	0.86	0.6566	0.86	0.16	T	0.0	B	0.0	B	.	.	1.000	P	0.91	L	3.1	T	-1.087	T	0.000	T	0.032	0.383	6.079	0.351	-0.212	-2.141	0.244	0.382851	NA	0.19	0.644535	0.798684	NA	0.768	NA	6.3472984
1017	9	129453229	129453229	A	G	exonic	LMX1B	NA	synonymous SNV	LMX1B:NM_001174146:exon3:c.A441G:p.E147E,LMX1B:NM_001174147:exon3:c.A441G:p.E147E,LMX1B:NM_002316:exon3:c.A441G:p.E147E	exonic	ENSG00000136944	NA	synonymous SNV	ENSG00000136944:ENST00000355497:exon3:c.A441G:p.E147E,ENSG00000136944:ENST00000373474:exon3:c.A441G:p.E147E,ENSG00000136944:ENST00000425646:exon3:c.A372G:p.E124E,ENSG00000136944:ENST00000526117:exon3:c.A441G:p.E147E,ENSG00000136944:ENST00000561065:exon3:c.A372G:p.E124E	Score=725;Name=lod=1184	NA	9q33.3	NA	Name=CTCF	NA	NA	rs2277158	0.48	0.48	0.48	0.480032	0.4394	0.5585	0.4092	0.5454	0.4029	0.42	0.54	0.48	0.5	0.4496	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.502328	1.502328	NA	0.430698	0.524739	NA	0.319	NA	6.3469686
1017	1	17609448	17609448	G	T	exonic	PADI3	NA	synonymous SNV	PADI3:NM_016233:exon16:c.G1869T:p.P623P	exonic	ENSG00000142619	NA	synonymous SNV	ENSG00000142619:ENST00000375460:exon16:c.G1869T:p.P623P	Score=649;Name=lod=577	NA	1p36.13	Score=855;Name=V$ZID_01	NA	NA	NA	rs2293920	0.43	0.43	0.424	0.404952	0.4374	0.623	0.415	0.1725	0.454	0.45	0.64	0.38	0.17	0.4399	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.966331	NA	NA	0.442558	0.231276	NA	0.319	NA	6.3468086
1017	6	32362702	32362702	T	C	exonic	BTNL2	NA	synonymous SNV	BTNL2:NM_019602:exon6:c.A1179G:p.P393P	exonic	ENSG00000204290	NA	synonymous SNV	ENSG00000204290:ENST00000414363:exon4:c.A549G:p.P183P,ENSG00000204290:ENST00000540315:exon4:c.A549G:p.P183P,ENSG00000204290:ENST00000544175:exon5:c.A348G:p.P116P,ENSG00000204290:ENST00000374993:exon6:c.A1179G:p.P393P,ENSG00000204290:ENST00000374995:exon6:c.A897G:p.P299P,ENSG00000204290:ENST00000454136:exon6:c.A1179G:p.P393P	NA	NA	6p21.32	Score=941;Name=V$NMYC_01	NA	NA	NA	rs41342846	0.12	0.12	NA	0.163938	0.163	0.1587	0.1599	0.1422	0.2025	0.11	0.15	0.15	0.09	0.1548	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.76413	NA	NA	0.002674	0.003404	NA	NA	NA	6.3461926
1017	17	3846802	3846802	A	G	exonic	ATP2A3	NA	synonymous SNV	ATP2A3:NM_005173:exon11:c.T1302C:p.Y434Y,ATP2A3:NM_174953:exon11:c.T1302C:p.Y434Y,ATP2A3:NM_174954:exon11:c.T1302C:p.Y434Y,ATP2A3:NM_174955:exon11:c.T1302C:p.Y434Y,ATP2A3:NM_174956:exon11:c.T1302C:p.Y434Y,ATP2A3:NM_174957:exon11:c.T1302C:p.Y434Y,ATP2A3:NM_174958:exon11:c.T1302C:p.Y434Y	exonic	ENSG00000074370	NA	synonymous SNV	ENSG00000074370:ENST00000309890:exon11:c.T1302C:p.Y434Y,ENSG00000074370:ENST00000352011:exon11:c.T1302C:p.Y434Y,ENSG00000074370:ENST00000359983:exon11:c.T1302C:p.Y434Y,ENSG00000074370:ENST00000397035:exon11:c.T1302C:p.Y434Y,ENSG00000074370:ENST00000397041:exon11:c.T1302C:p.Y434Y,ENSG00000074370:ENST00000397043:exon11:c.T1302C:p.Y434Y	Score=558;Name=lod=248	NA	17p13.2	Score=721;Name=V$HOX13_01	NA	NA	NA	rs758641	0.35	0.35	0.325	0.333267	0.4563	0.0843	0.4582	0.3956	0.2904	0.47	0.08	0.49	0.37	0.4015	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.16429	NA	NA	0.462907	0.392646	NA	0.333	NA	6.3459596
1017	17	74944151	74944151	C	T	exonic	MGAT5B	NA	synonymous SNV	MGAT5B:NM_198955:exon15:c.C2190T:p.S730S,MGAT5B:NM_001199172:exon16:c.C2163T:p.S721S,MGAT5B:NM_144677:exon16:c.C2157T:p.S719S	exonic	ENSG00000167889	NA	synonymous SNV	ENSG00000167889:ENST00000428789:exon15:c.C2190T:p.S730S,ENSG00000167889:ENST00000301618:exon16:c.C2157T:p.S719S,ENSG00000167889:ENST00000569840:exon17:c.C2163T:p.S721S	Score=545;Name=lod=218	NA	17q25.2	NA	NA	NA	NA	rs71384132	0.07	0.07	0.064	0.0686901	0.1034	NA	0.0922	0.0454	0.1186	0.1	NA	0.12	0.05	0.0991	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.102795	NA	NA	0.118256	0.055833	NA	0.094	NA	6.3459106
1017	2	89512854	89512854	A	C	intergenic	MIR4436A,NONE	dist=400886;dist=NONE	NA	NA	downstream	ENSG00000244575	NA	NA	NA	Score=333;Name=lod=30	NA	2p11.2	NA	Name=CTCF	Name=44	NA	rs410695	0.31	0.31	0.287	0.315695	0.1541	0.3165	0.3357	0.5234	0.1861	0.19	0.32	0.3	0.51	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.064372	NA	NA	NA	NA	NA	0.007	NA	6.3459
1017	10	121436362	121436362	A	G	exonic	BAG3	NA	synonymous SNV	BAG3:NM_004281:exon4:c.A1296G:p.V432V	exonic	ENSG00000151929	NA	synonymous SNV	ENSG00000151929:ENST00000369085:exon4:c.A1296G:p.V432V	Score=554;Name=lod=238	NA	10q26.11	Score=814;Name=V$ARP1_01	NA	NA	NA	rs196295	0.7	0.7	0.692	0.70647	0.8012	0.4881	0.7219	0.7534	0.7597	0.8	0.5	0.77	0.72	0.7409	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.920116	NA	NA	0.779186	0.753064	NA	0.783	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=mult|single;CLNACC=RCV000037886.2|RCV000123817.1;CLNDSDB=.|.;CLNDSDBID=.|.	6.3453806
1018	21	41165462	41165462	C	A	exonic	IGSF5	NA	nonsynonymous SNV	IGSF5:NM_001080444:exon8:c.C1050A:p.D350E	exonic	ENSG00000183067	NA	nonsynonymous SNV	ENSG00000183067:ENST00000380588:exon8:c.C1050A:p.D350E	NA	NA	21q22.2	NA	NA	NA	NA	rs2837225	0.45	0.45	0.432	0.450479	0.333	0.4802	0.5173	0.5265	0.3906	0.35	0.49	0.5	0.51	0.3645	0.51	1	T	0.0	B	0.0	B	0.015	N	1.000	P	0	N	3.44	T	-0.940	T	0.000	T	0.021	-1.499	0.017	-1.03	-0.476	-0.700	4.513	-1.499114	NA	1	0.29093	0.498638	ID=COSM149226;OCCURENCE=1(stomach)	0.406	NA	6.3449034
1018	7	20418678	20418678	C	T	exonic	ITGB8	NA	synonymous SNV	ITGB8:NM_002214:exon4:c.C393T:p.A131A	exonic	ENSG00000105855	NA	synonymous SNV	ENSG00000105855:ENST00000222573:exon4:c.C393T:p.A131A	Score=606;Name=lod=387	NA	7p21.1	NA	NA	NA	NA	rs3735619	0.19	0.19	0.174	0.160343	0.1004	0.4107	0.072	0.0998	0.1084	0.1	0.42	0.09	0.11	0.1265	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.864472	NA	NA	0.095216	0.114113	ID=COSM150243;OCCURENCE=1(stomach)	0.08	NA	6.3445506
1018	6	144081768	144081768	C	A	exonic	PHACTR2	NA	synonymous SNV	PHACTR2:NM_001100164:exon5:c.C685A:p.R229R,PHACTR2:NM_014721:exon5:c.C652A:p.R218R	exonic	ENSG00000112419	NA	synonymous SNV	ENSG00000112419:ENST00000427704:exon5:c.C652A:p.R218R,ENSG00000112419:ENST00000440869:exon5:c.C685A:p.R229R	Score=529;Name=lod=189	NA	6q24.2	NA	NA	NA	NA	rs2073215	0.22	0.22	0.223	0.219249	0.0964	0.3988	0.183	0.2247	0.1789	0.11	0.41	0.18	0.21	0.1453	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.447244	1.447244	NA	0.081398	0.209989	NA	0.188	NA	6.3435686
1018	3	107097346	107097346	C	A	exonic	CCDC54	NA	synonymous SNV	CCDC54:NM_032600:exon1:c.C912A:p.T304T	exonic	ENSG00000138483	NA	synonymous SNV	ENSG00000138483:ENST00000261058:exon1:c.C912A:p.T304T	Score=278;Name=lod=18	NA	3q13.12	NA	NA	NA	NA	rs3811061	0.08	0.08	0.083	0.0690895	0.1272	0.0357	0.0692	0.0204	0.1094	0.14	0.05	0.08	0.02	0.0865	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.780673	NA	NA	0.109506	0.036123	NA	0.087	NA	6.3434606
1018	12	94642023	94642023	C	T	exonic	PLXNC1	NA	synonymous SNV	PLXNC1:NM_005761:exon14:c.C2613T:p.N871N	exonic	ENSG00000136040	NA	synonymous SNV	ENSG00000136040:ENST00000258526:exon14:c.C2613T:p.N871N	Score=482;Name=lod=121	NA	12q22	NA	NA	NA	NA	rs2230756	0.06	0.06	0.054	0.0553115	0.1243	NA	0.0461	0.0348	0.0757	0.13	NA	0.04	0.04	0.0891	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.10694	NA	NA	0.110233	0.037903	NA	0.094	NA	6.3430336
1018	16	21045369	21045369	A	G	exonic	DNAH3	NA	synonymous SNV	DNAH3:NM_017539:exon36:c.T5124C:p.I1708I	exonic	ENSG00000158486	NA	synonymous SNV	ENSG00000158486:ENST00000261383:exon36:c.T5124C:p.I1708I,ENSG00000158486:ENST00000415178:exon36:c.T5124C:p.I1708I	Score=558;Name=lod=247	NA	16p12.3	NA	NA	NA	NA	rs2112494	0.1	0.1	0.087	0.104832	0.1044	0.1597	0.0908	0.0212	0.1718	0.12	0.14	0.09	0.03	0.1199	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.34039	NA	NA	0.099535	0.031804	NA	0.065	NA	6.3428316
1018	2	220404726	220404726	G	A	exonic	CHPF	NA	synonymous SNV	CHPF:NM_001195731:exon4:c.C1221T:p.H407H,CHPF:NM_024536:exon4:c.C1707T:p.H569H	exonic	ENSG00000123989	NA	synonymous SNV	ENSG00000123989:ENST00000243776:exon4:c.C1707T:p.H569H,ENSG00000123989:ENST00000535926:exon4:c.C1221T:p.H407H	Score=436;Name=lod=79	NA	2q35	Score=967;Name=V$USF_Q6	NA	NA	NA	rs1043832	0.36	0.36	0.342	0.30631	0.4523	0.2738	0.4841	0.1891	0.2219	0.46	0.27	0.44	0.22	0.4095	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.69868	NA	NA	0.462299	0.248523	NA	0.42	NA	6.3425676
1018	12	6935955	6935955	T	C	exonic	GPR162	NA	synonymous SNV	GPR162:NM_014449:exon5:c.T501C:p.G167G,GPR162:NM_019858:exon5:c.T1353C:p.G451G	exonic	ENSG00000250510	NA	synonymous SNV	ENSG00000250510:ENST00000382315:exon4:c.T441C:p.G147G,ENSG00000250510:ENST00000311268:exon5:c.T1353C:p.G451G,ENSG00000250510:ENST00000428545:exon5:c.T501C:p.G167G	Score=346;Name=lod=34	NA	12p13.31	NA	NA	NA	NA	rs35717080	0.11	0.11	0.061	0.0459265	0.1302	0.001	0.0519	0.0068	0.0542	0.17	0.05	0.11	0.06	0.0818	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.547055	NA	NA	0.112674	0.023377	NA	0.029	NA	6.3419926
1018	19	51302716	51302716	G	A	ncRNA_exonic	SNORD88A	NA	NA	NA	ncRNA_exonic	ENSG00000221241	NA	NA	NA	Score=445;Name=lod=86	NA	19q13.33	Score=843;Name=V$PPARG_01	NA	NA	NA	rs3810284	0.11	0.11	0.088	0.0992412	0.0805	0.126	0.0706	0.1505	0.0419	0.08	0.13	0.09	0.13	0.1528	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.909244	1.909244	NA	0.092238	0.128884	NA	0.072	NA	6.3411286
1018	15	45654327	45654327	A	G	exonic	GATM	NA	synonymous SNV	GATM:NM_001482:exon9:c.T1252C:p.L418L	exonic	ENSG00000171766	NA	synonymous SNV	ENSG00000171766:ENST00000396659:exon9:c.T1252C:p.L418L	Score=527;Name=lod=185	NA	15q21.1	NA	NA	NA	NA	rs1145086	0.69	0.69	0.704	0.717652	0.4076	0.8988	0.6326	0.9213	0.635	0.4	0.94	0.59	0.92	0.5329	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.822391	NA	NA	0.385179	0.824841	NA	0.594	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117124.2;CLNDSDB=.;CLNDSDBID=.	6.3409876
1018	10	135438951	135438951	G	A	exonic	FRG2B	NA	synonymous SNV	FRG2B:NM_001080998:exon4:c.C489T:p.A163A	exonic	ENSG00000225899	NA	synonymous SNV	ENSG00000225899:ENST00000425520:exon4:c.C489T:p.A163A,ENSG00000225899:ENST00000443774:exon4:c.C492T:p.A164A	NA	NA	10q26.3	NA	NA	NA	NA	rs200483318	NA	NA	0.191	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.326	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.02229	NA	NA	NA	NA	NA	0.007	CLINSIG=other;CLNDBN=Malignant_melanoma;CLNREVSTAT=not;CLNACC=RCV000068867.2;CLNDSDB=MedGen:SNOMED_CT;CLNDSDBID=C0025202:2092003	6.3406666
1018	12	97102578	97102578	G	A	intergenic	CDK17,NEDD1	dist=308212;dist=198423	NA	NA	exonic	ENSG00000270032	NA	nonsynonymous SNV	ENSG00000270032:ENST00000524981:exon15:c.G2074A:p.E692K	Score=325;Name=lod=28	NA	12q23.1	NA	NA	NA	NA	rs7968231	0.9	0.9	0.892	0.91853	0.8211	0.9484	0.8963	0.9735	0.9294	0.83	0.94	0.87	0.97	0.8649	0.97	1	T	0.0	B	0.0	B	0.000	N	1.000	P	.	.	.	.	-0.929	T	0.000	T	0.169	-0.952	0.339	5.07	0.884	2.840	8.022	-0.951692	NA	1	0.806932	0.950749	NA	0.884	NA	6.3404014
1018	17	65732093	65732093	A	G	exonic	NOL11	NA	synonymous SNV	NOL11:NM_015462:exon9:c.A1008G:p.S336S	exonic	ENSG00000130935	NA	synonymous SNV	ENSG00000130935:ENST00000535137:exon8:c.A462G:p.S154S,ENSG00000130935:ENST00000253247:exon9:c.A1008G:p.S336S	Score=483;Name=lod=122	NA	17q24.2	NA	NA	NA	NA	rs3760227	0.11	0.11	0.098	0.0870607	0.1193	0.13	0.0937	0.0575	0.045	0.13	0.14	0.09	0.07	0.1005	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.224978	NA	NA	0.107558	0.060372	NA	0.13	NA	6.3393086
1018	22	22869742	22869742	C	A	exonic	ZNF280A	NA	nonsynonymous SNV	ZNF280A:NM_080740:exon2:c.G213T:p.K71N	exonic	ENSG00000169548	NA	nonsynonymous SNV	ENSG00000169548:ENST00000302097:exon2:c.G213T:p.K71N	NA	NA	22q11.22	NA	Name=USF-1	NA	NA	rs361959	0.53	0.53	0.489	0.473842	0.7038	0.4147	0.7349	0.2398	0.4294	0.7	0.43	0.7	0.26	0.6101	0.7	0.34	T	0.0	B	0.0	B	.	.	1.000	P	-1.1	N	1.96	T	-1.026	T	0.000	T	0.009	0.041	4.228	-0.551	-0.555	-0.005	3.910	0.041208	NA	0.32	0.680581	0.307762	NA	0.413	NA	6.3388524
1018	6	33144243	33144243	T	A	exonic	COL11A2	NA	synonymous SNV	COL11A2:NM_080679:exon24:c.A1815T:p.G605G,COL11A2:NM_080681:exon25:c.A1878T:p.G626G,COL11A2:NM_080680:exon27:c.A2136T:p.G712G	exonic	ENSG00000204248	NA	synonymous SNV	ENSG00000204248:ENST00000361917:exon24:c.A1815T:p.G605G,ENSG00000204248:ENST00000374708:exon25:c.A1878T:p.G626G,ENSG00000204248:ENST00000374712:exon25:c.A1893T:p.G631G,ENSG00000204248:ENST00000374713:exon25:c.A1995T:p.G665G,ENSG00000204248:ENST00000357486:exon26:c.A2073T:p.G691G,ENSG00000204248:ENST00000374714:exon26:c.A2058T:p.G686G,ENSG00000204248:ENST00000395197:exon26:c.A1956T:p.G652G,ENSG00000204248:ENST00000341947:exon27:c.A2136T:p.G712G	Score=563;Name=lod=259	NA	6p21.32	NA	NA	NA	NA	rs1799908	0.54	0.54	0.528	0.547125	0.4414	0.7192	0.5144	0.5242	0.5327	0.44	0.7	0.55	0.51	0.4788	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.58027	1.58027	NA	0.407866	0.493051	ID=COSM451289;OCCURENCE=1(breast)	0.543	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000039828.1;CLNDSDB=.;CLNDSDBID=.	6.3386006
1018	22	22869218	22869218	T	C	exonic	ZNF280A	NA	nonsynonymous SNV	ZNF280A:NM_080740:exon2:c.A737G:p.N246S	exonic	ENSG00000169548	NA	nonsynonymous SNV	ENSG00000169548:ENST00000302097:exon2:c.A737G:p.N246S	NA	NA	22q11.22	NA	NA	NA	NA	rs362132	0.53	0.53	0.473	0.473442	0.7038	0.4147	0.732	0.2383	0.4315	0.7	0.43	0.7	0.26	0.6103	0.7	0.66	T	0.361	B	0.046	B	.	.	1.000	P	0.55	N	5.17	T	-1.104	T	0.000	T	0.008	0.857	8.469	0.027	-0.070	1.136	2.487	0.857162	NA	0.23	0.68093	0.308216	NA	0.406	NA	6.3383034
1018	16	89294595	89294595	C	T	exonic	ZNF778	NA	synonymous SNV	ZNF778:NM_182531:exon6:c.C1815T:p.I605I,ZNF778:NM_001201407:exon7:c.C1899T:p.I633I	exonic	ENSG00000170100	NA	synonymous SNV	ENSG00000170100:ENST00000306502:exon5:c.C1689T:p.I563I,ENSG00000170100:ENST00000433976:exon6:c.C1815T:p.I605I	NA	NA	16q24.3	NA	Name=SETDB1	NA	NA	rs74466939	0.15	0.15	0.144	0.16234	0.0815	0.1746	0.2651	0.1248	0.2106	0.07	0.2	0.23	0.15	0.1478	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.62039	NA	NA	0.100023	0.126937	NA	0.181	NA	6.3373436
1018	15	65489688	65489688	T	C	exonic	CILP	NA	nonsynonymous SNV	CILP:NM_003613:exon9:c.A2936G:p.Q979R	exonic	ENSG00000138615	NA	nonsynonymous SNV	ENSG00000138615:ENST00000261883:exon9:c.A2936G:p.Q979R	NA	NA	15q22.31	NA	NA	NA	NA	rs2679117	0.99	0.99	0.991	0.991014	1	1	1	0.966	1	1	1	1	0.95	0.9965	1	1	T	0.0	B	0.0	B	0.254	N	1.000	P	-0.235	N	3.01	T	-0.921	T	0.000	T	0.007	-1.681	0.012	-8.8	-1.771	-0.901	12.368	-1.681485	NA	1	0.999767	0.959355	NA	0.993	NA	6.3370664
1018	19	51507020	51507020	T	G	exonic	KLK9	NA	synonymous SNV	KLK9:NM_012315:exon4:c.A543C:p.G181G	exonic	ENSG00000213022,ENSG00000269741	NA	synonymous SNV	ENSG00000269741:ENST00000599166:exon1:c.A66C:p.G22G,ENSG00000269741:ENST00000250366:exon4:c.A543C:p.G181G,ENSG00000213022:ENST00000376832:exon4:c.A543C:p.G181G,ENSG00000213022:ENST00000594211:exon4:c.A543C:p.G181G	Score=340;Name=lod=32	NA	19q13.41	Score=878;Name=V$IK3_01	NA	NA	NA	rs2075802	0.48	0.48	0.475	0.484225	0.4374	0.2569	0.5086	0.8041	0.317	0.44	0.27	0.52	0.78	0.4535	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.500601	NA	NA	0.439186	0.75261	NA	0.587	NA	6.3365806
1018	5	95768847	95768847	A	G	UTR5	PCSK1	NM_000439:c.-101T>C	NA	NA	ncRNA_UTR5	ENSG00000175426	NA	NA	NA	NA	NA	5q15	NA	Name=NRSF	Name=12	NA	rs6230	0.23	0.23	0.218	0.251797	0.164	0.2768	0.1614	0.2776	0.3456	0.18	0.29	0.17	0.27	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.010142	NA	NA	NA	NA	NA	0.203	NA	6.336
1018	1	145561116	145561116	G	A	exonic	ANKRD35	NA	synonymous SNV	ANKRD35:NM_144698:exon10:c.G804A:p.Q268Q	exonic	ENSG00000198483	NA	synonymous SNV	ENSG00000198483:ENST00000355594:exon10:c.G804A:p.Q268Q	Score=443;Name=lod=84	NA	1q21.1	NA	NA	NA	NA	rs11578772	0.05	0.05	0.041	0.0365415	0.1133	NA	0.0692	0.0023	0.0184	0.11	NA	0.07	0.002	0.0926	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.907034	NA	NA	0.124767	0.026101	NA	0.072	NA	6.3359996
1018	20	25264814	25264814	T	C	exonic	PYGB	NA	synonymous SNV	PYGB:NM_002862:exon14:c.T1695C:p.D565D	exonic	ENSG00000100994	NA	synonymous SNV	ENSG00000100994:ENST00000216962:exon14:c.T1695C:p.D565D	Score=456;Name=lod=95	NA	20p11.21	Score=865;Name=V$YY1_01	NA	NA	NA	rs2227892	0.55	0.55	0.542	0.536941	0.4334	0.9107	0.3473	0.4516	0.5082	0.44	0.93	0.35	0.44	0.4609	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.329799	NA	NA	0.436512	0.431911	NA	0.486	NA	6.3358546
1019	1	145112428	145112428	C	T	exonic	SEC22B	NA	unknown	UNKNOWN	ncRNA_exonic	ENSG00000223380	NA	NA	NA	Score=698;Name=lod=912	NA	1q21.1	NA	NA	Name=5	NA	rs2794040	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4992	0.054	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.252488	3.252488	NA	NA	NA	NA	0.058	NA	6.3341333
1019	7	100551778	100551778	G	A	intergenic	ACHE,MUC12	dist=58237;dist=61126	NA	NA	exonic	ENSG00000169894	NA	nonsynonymous SNV	ENSG00000169894:ENST00000319509:exon1:c.G529A:p.V177M	NA	NA	7q22.1	NA	NA	NA	NA	rs73714247	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4993	0.49	0.28	T	0.0	B	0.0	B	.	.	0.635	N	0	N	3.21	T	-0.946	T	0.010	T	0.038	0.002	4.024	-0.48	-1.082	-0.625	2.315	0.00185	NA	0.27	NA	NA	NA	0.493	NA	6.3340334
1019	7	142180704	142180704	G	T	intergenic	LOC730441,MTRNR2L6	dist=208636;dist=193427	NA	NA	exonic	ENSG00000211721	NA	nonsynonymous SNV	ENSG00000211721:ENST00000390368:exon2:c.C155A:p.S52Y	Score=284;Name=lod=19	NA	7q34	NA	NA	Name=4	NA	rs368420989	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4993	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.834931	NA	1	NA	NA	NA	NA	NA	6.3340334
1019	13	45149662	45149662	G	A	exonic	TSC22D1	NA	synonymous SNV	TSC22D1:NM_001243799:exon1:c.C549T:p.A183A,TSC22D1:NM_183422:exon1:c.C549T:p.A183A	exonic	ENSG00000102804	NA	synonymous SNV	ENSG00000102804:ENST00000458659:exon1:c.C549T:p.A183A,ENSG00000102804:ENST00000501704:exon1:c.C549T:p.A183A	NA	NA	13q14.11	Score=754;Name=V$STAT5A_02	NA	NA	NA	rs9525984	0.05	0.05	0.046	0.0527157	0.1163	0.001	0.0937	0.0166	0.0603	0.12	NA	0.06	0.02	0.0928	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.654366	NA	NA	0.123721	0.032229	NA	0.13	NA	6.3338456
1019	7	100552535	100552535	G	A	intergenic	ACHE,MUC12	dist=58994;dist=60369	NA	NA	exonic	ENSG00000169894	NA	nonsynonymous SNV	ENSG00000169894:ENST00000319509:exon1:c.G1286A:p.S429N	NA	NA	7q22.1	NA	NA	NA	NA	rs73163758	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4995	NA	0.73	T	0.019	B	0.007	B	.	.	0.723	N	0	N	3.24	T	-0.916	T	0.009	T	0.052	-1.993	0.007	-0.671	-0.199	-2.615	2.918	-1.993492	NA	0.3	NA	NA	NA	NA	NA	6.3338334
1019	12	48866792	48866792	C	T	exonic	ANP32D	NA	synonymous SNV	ANP32D:NM_012404:exon1:c.C345T:p.L115L	exonic	ENSG00000139223	NA	synonymous SNV	ENSG00000139223:ENST00000266594:exon1:c.C345T:p.L115L	Score=694;Name=lod=883	NA	12q13.11	NA	NA	NA	NA	rs7966826	0.28	0.28	0.228	0.290335	0.0815	0.6548	0.3357	0.1604	0.273	0.09	0.63	0.3	0.14	0.1868	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.290044	1.290044	NA	0.064535	0.155016	ID=COSM147491;OCCURENCE=1(stomach)	0.174	NA	6.3338316
1019	7	100549787	100549787	C	T	intergenic	ACHE,MUC12	dist=56246;dist=63117	NA	NA	exonic	ENSG00000228273	NA	nonsynonymous SNV	ENSG00000228273:ENST00000379458:exon2:c.C368T:p.S123L	NA	NA	7q22.1	NA	NA	NA	NA	rs73714227	NA	NA	NA	0.000199681	NA	NA	NA	NA	0.001	NA	NA	NA	NA	0.4999	NA	0.29	T	.	.	.	.	.	.	.	.	0.345	N	.	.	-0.985	T	0.058	T	0.296	1.389	10.58	-1.23	-0.348	-5.624	6.586	1.389278	1.389278	0.45	NA	NA	ID=COSM304005;OCCURENCE=1(central_nervous_system)	NA	NA	6.3334334
1019	1	244735858	244735858	A	G	exonic	C1orf101	NA	synonymous SNV	C1orf101:NM_001242340:exon8:c.A1281G:p.T427T,C1orf101:NM_001130957:exon11:c.A1734G:p.T578T,C1orf101:NM_173807:exon11:c.A1734G:p.T578T	exonic	ENSG00000179397	NA	synonymous SNV	ENSG00000179397:ENST00000428042:exon7:c.A1494G:p.T498T,ENSG00000179397:ENST00000366531:exon8:c.A1281G:p.T427T,ENSG00000179397:ENST00000366533:exon11:c.A1734G:p.T578T,ENSG00000179397:ENST00000366534:exon11:c.A1734G:p.T578T	NA	NA	1q44	NA	Name=SETDB1	NA	NA	rs10927267	0.25	0.25	0.231	0.271965	0.0785	0.373	0.2464	0.4289	0.1728	0.08	0.36	0.23	0.41	0.1658	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.084132	NA	NA	0.088953	0.384249	ID=COSM425808,COSM1473723;OCCURENCE=1(breast)	0.254	NA	6.3334136
1019	1	144892149	144892149	G	A	UTR3	PDE4DIP	NM_001002812:c.*65C>T,NM_001002811:c.*65C>T	NA	NA	UTR3	ENSG00000178104	ENST00000369349:c.*65C>T,ENST00000369351:c.*289C>T,ENST00000313431:c.*65C>T	NA	NA	NA	NA	1q21.1	NA	Name=KAP1	Name=4	NA	rs1698709	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.276164	NA	NA	NA	NA	NA	0.493	NA	6.3333334
1019	2	133018849	133018849	G	A	intergenic	ANKRD30BL,GPR39	dist=3307;dist=155298	NA	NA	intergenic	ENSG00000221288,ENSG00000233786	dist=4196;dist=1052	NA	NA	Score=728;Name=lod=1217	NA	2q21.2	NA	Name=ZBTB33	Name=147	NA	rs112058313	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.223961	NA	NA	NA	NA	NA	NA	NA	6.3333334
1019	3	74313501	74313501	T	C	UTR3	CNTN3	NM_020872:c.*51A>G	NA	NA	UTR3	ENSG00000113805	ENST00000263665:c.*51A>G	NA	NA	Score=483;Name=lod=122	NA	3p12.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.833134	NA	NA	NA	NA	NA	NA	NA	6.3333334
1019	7	75792358	75792358	A	G	intergenic	MDH2,SRRM3	dist=96428;dist=38858	NA	NA	intergenic	ENSG00000224273,ENSG00000228829	dist=30853;dist=10693	NA	NA	NA	NA	7q11.23	NA	Name=FOSL2,JunD	Name=25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.66274	NA	NA	NA	NA	NA	0.007	NA	6.3333334
1019	10	70968818	70968818	A	T	UTR3	SUPV3L1	NM_003171:c.*27A>T	NA	NA	UTR3	ENSG00000156502	ENST00000359655:c.*27A>T	NA	NA	Score=265;Name=lod=16	NA	10q22.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.973027	NA	NA	NA	NA	NA	NA	NA	6.3333334
1019	12	57335150	57335150	G	A	intergenic	SDR9C7,RDH16	dist=6961;dist=10066	NA	NA	intergenic	ENSG00000170426,ENSG00000139547	dist=6961;dist=10069	NA	NA	Score=517;Name=lod=168	NA	12q13.3	NA	Name=GR,c-Myc	Name=38	NA	rs71459397	NA	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.723127	NA	NA	NA	NA	NA	0.174	NA	6.3333334
1019	12	57335154	57335154	G	A	intergenic	SDR9C7,RDH16	dist=6965;dist=10062	NA	NA	intergenic	ENSG00000170426,ENSG00000139547	dist=6965;dist=10065	NA	NA	Score=517;Name=lod=168	NA	12q13.3	NA	Name=c-Myc,FOSL2,GR	Name=38	NA	rs71459398	NA	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.295342	NA	NA	NA	NA	NA	0.196	NA	6.3333334
1019	12	57911309	57911309	T	C	UTR5	DDIT3	NM_001195054:c.-51A>G,NM_001195053:c.-51A>G,NM_001195056:c.-51A>G	NA	NA	UTR5;UTR3	ENSG00000175197;ENSG00000166986	ENST00000551116:c.-51A>G,ENST00000552740:c.-51A>G,ENST00000547526:c.-51A>G;ENST00000537638:c.*1222T>C	NA	NA	NA	NA	12q13.3	NA	Name=Pol2(b),Pol2	Name=103	NA	rs28382851	0.0018	0.0018	0.002	0.00279553	NA	NA	0.0014	0.0091	0.001	NA	NA	NA	0.01	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.499043	1.499043	NA	NA	NA	NA	0.014	NA	6.3333334
1019	12	132166871	132166871	C	T	intergenic	LOC116437,SFSWAP	dist=469395;dist=28761	NA	NA	intergenic	ENSG00000243499,ENSG00000061936	dist=14080;dist=28763	NA	NA	Score=426;Name=lod=72	NA	12q24.33	NA	Name=IRF1,SP1	Name=36	NA	rs113096312	0.13	0.13	0.097	NA	NA	NA	NA	NA	NA	0.16	0.04	0.17	0.13	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.005026	NA	NA	NA	NA	NA	NA	NA	6.3333334
1019	12	132166877	132166877	G	A	intergenic	LOC116437,SFSWAP	dist=469401;dist=28755	NA	NA	intergenic	ENSG00000243499,ENSG00000061936	dist=14086;dist=28757	NA	NA	Score=426;Name=lod=72	NA	12q24.33	NA	Name=IRF1,SP1	Name=36	NA	rs373665046	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.002883	NA	NA	NA	NA	NA	NA	NA	6.3333334
1019	18	61637385	61637385	A	G	UTR5	SERPINB8	NM_001031848:c.-8158A>G,NM_002640:c.-8158A>G,NM_001276490:c.-13550A>G,NM_198833:c.-8158A>G	NA	NA	UTR5	ENSG00000166401	ENST00000397985:c.-8158A>G,ENST00000353706:c.-8158A>G,ENST00000542677:c.-13550A>G,ENST00000397988:c.-8158A>G	NA	NA	NA	NA	18q22.1	NA	Name=Mxi1_(bHLH),Pol2,Pol2(phosphoS2),TCF4,YY1_(C-20),TR4,TAF1,POU2F2,GABP,CEBPB,GTF2F1_(RAP-74),Oct-2,RFX5_(N-494),c-Jun,c-Fos,JunD,ELK4,p300_(N-15),TBP,eGFP-FOS	Name=133	NA	rs55686360	0.08	0.08	0.033	NA	NA	NA	NA	NA	NA	0.06	0.04	0.09	0.17	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.012629	NA	NA	NA	NA	NA	0.043	NA	6.3333334
1019	19	9453846	9453846	T	A	UTR3	ZNF559	NM_001202410:c.*1542T>A,NM_001202407:c.*102T>A,NM_001202406:c.*102T>A,NM_001202409:c.*1542T>A,NM_001202408:c.*1542T>A,NM_001202411:c.*1542T>A,NM_032497:c.*102T>A,NM_001202412:c.*1542T>A	NA	NA	UTR3	ENSG00000188321	ENST00000587557:c.*102T>A,ENST00000317221:c.*1542T>A,ENST00000603380:c.*102T>A,ENST00000605750:c.*102T>A,ENST00000538743:c.*102T>A,ENST00000393883:c.*102T>A	NA	NA	Score=251;Name=lod=14	NA	19p13.2	NA	Name=SETDB1	NA	NA	rs112547151	0.02	0.02	0.021	0.0279553	NA	NA	0.0072	0.1021	NA	NA	NA	0.01	0.1	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.077546	NA	NA	NA	NA	NA	0.029	NA	6.3333334
1019	19	21688452	21688452	C	T	UTR5	ZNF429	NM_001001415:c.-122C>T	NA	NA	UTR5	ENSG00000197013	ENST00000358491:c.-122C>T,ENST00000597078:c.-122C>T	NA	NA	NA	NA	19p12	NA	Name=TBP,IRF1,HEY1,NFKB,RFX5_(N-494),YY1,Pol2-4H8,Pol2(b),p300,ELF1_(SC-631),NF-YB,SP1,Pol2,TAF7_(SQ-8),YY1_(C-20),TAF1,SP2_(SC-643),NF-YA	Name=140	NA	rs148740939	0.0041	0.0041	0.005	0.00838658	NA	NA	0.0014	0.031	NA	NA	NA	0.0028	0.02	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.060995	NA	NA	NA	NA	NA	0.007	NA	6.3333334
1019	19	41257185	41257185	C	T	UTR5	SNRPA	NM_004596:c.-129C>T	NA	NA	UTR5	ENSG00000077312	ENST00000243563:c.-129C>T,ENST00000601393:c.-129C>T	NA	NA	NA	NA	19q13.2	NA	Name=GABP,ZBTB33,E2F4,TAF1,E2F6_(H-50),ETS1,E2F6,BRCA1_(C-1863),YY1_(C-20),TAF7_(SQ-8),Pol2(phosphoS2),Pol2,Mxi1_(bHLH),PU.1,ELF1_(SC-631),Max,GTF2F1_(RAP-74),RXRA,CHD2_(N-1250),Pol2-4H8,E2F1,Sin3Ak-20,HA-E2F1,NFKB,HEY1,c-Myc,TBP,USF-1	Name=141	NA	rs75531803	0.01	0.01	0.011	0.0129792	NA	0.001	0.0072	0.0446	NA	NA	NA	0.01	0.05	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.194401	NA	NA	NA	NA	NA	0.007	NA	6.3333334
1019	20	31022959	31022959	T	C	exonic	ASXL1	NA	nonsynonymous SNV	ASXL1:NM_015338:exon12:c.T2444C:p.L815P	exonic	ENSG00000171456	NA	nonsynonymous SNV	ENSG00000171456:ENST00000306058:exon12:c.T2429C:p.L810P,ENSG00000171456:ENST00000375687:exon13:c.T2444C:p.L815P	NA	NA	20q11.21	NA	NA	NA	NA	rs6058694	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	0.76	T	0.0	B	0.0	B	0.079	N	1.000	P	-0.345	N	2.51	T	-1.031	T	0.000	T	0.066	0.652	7.496	-4.18	-1.372	-0.136	3.524	0.651586	NA	0.29	1	0.999773	NA	1	NA	6.3333334
1019	1	53461554	53461554	T	C	intronic	SCP2	NA	NA	NA	ncRNA_exonic	ENSG00000226147	NA	NA	NA	Score=855;Name=lod=3987	NA	1p32.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.602891	NA	NA	NA	NA	NA	NA	NA	6.3333333
1019	1	180404120	180404120	G	C	intronic	ACBD6	NA	NA	NA	ncRNA_exonic	ENSG00000235060	NA	NA	NA	Score=714;Name=lod=1060	NA	1q25.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.168816	NA	NA	NA	NA	NA	NA	NA	6.3333333
1019	3	141762850	141762850	G	A	intronic	TFDP2	NA	NA	NA	ncRNA_exonic	ENSG00000233597	NA	NA	NA	Score=687;Name=lod=825	NA	3q23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.061507	NA	NA	NA	NA	NA	NA	NA	6.3333333
1019	4	77322494	77322494	G	C	intronic	CCDC158	NA	NA	NA	ncRNA_exonic	ENSG00000240426	NA	NA	NA	Score=569;Name=lod=275	NA	4q21.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.506247	NA	NA	NA	NA	NA	NA	NA	6.3333333
1019	5	31840906	31840906	A	G	intronic	PDZD2	NA	NA	NA	ncRNA_exonic	ENSG00000241739	NA	NA	NA	Score=701;Name=lod=941	NA	5p13.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.084814	NA	NA	NA	NA	NA	NA	NA	6.3333333
1019	8	39855489	39855489	G	T	intronic	IDO2	NA	NA	NA	ncRNA_exonic	ENSG00000253790	NA	NA	NA	Score=691;Name=lod=855	NA	8p11.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.216218	NA	NA	NA	NA	NA	NA	NA	6.3333333
1019	9	140777432	140777432	C	T	intronic	CACNA1B	NA	NA	NA	ncRNA_exonic	ENSG00000203987	NA	NA	NA	NA	NA	9q34.3	NA	Name=SUZ12,NRSF	Name=9	NA	rs7863142	NA	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.427552	NA	NA	NA	NA	NA	0.406	NA	6.3333333
1019	9	140777524	140777524	G	A	intronic	CACNA1B	NA	NA	NA	ncRNA_intronic	ENSG00000203987	NA	NA	NA	NA	NA	9q34.3	NA	Name=CTCF	Name=9	NA	rs6559245	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.093101	NA	NA	NA	NA	NA	0.493	NA	6.3333333
1019	10	126179066	126179066	G	A	intronic	LHPP	NA	NA	NA	ncRNA_exonic	ENSG00000229455	NA	NA	NA	Score=717;Name=lod=1094	NA	10q26.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.231716	NA	NA	NA	NA	NA	NA	NA	6.3333333
1019	11	9981281	9981281	A	G	intronic	SBF2	NA	NA	NA	ncRNA_exonic	ENSG00000254765	NA	NA	NA	Score=599;Name=lod=361	NA	11p15.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.710733	NA	NA	NA	NA	NA	NA	NA	6.3333333
1019	11	56507838	56507838	A	G	intronic	OR8U8	NA	NA	NA	ncRNA_exonic	ENSG00000181325	NA	NA	NA	Score=448;Name=lod=88	NA	11q12.1	Score=839;Name=V$POU3F2_01	NA	NA	NA	rs74219940	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.179915	NA	NA	NA	NA	NA	NA	NA	6.3333333
1019	12	66957355	66957355	C	G	intronic	GRIP1	NA	NA	NA	ncRNA_exonic	ENSG00000256285	NA	NA	NA	Score=445;Name=lod=86	NA	12q14.3	NA	Name=SETDB1	NA	NA	rs73323150	NA	NA	0.225	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.750453	NA	NA	NA	NA	NA	NA	NA	6.3333333
1019	12	121283425	121283425	C	A	intronic	SPPL3	NA	NA	NA	ncRNA_exonic	ENSG00000213137	NA	NA	NA	Score=764;Name=lod=1692	NA	12q24.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.318444	1.318444	NA	NA	NA	NA	NA	NA	6.3333333
1019	15	80872633	80872633	G	A	intronic	ARNT2	NA	NA	NA	ncRNA_exonic	ENSG00000270919	NA	NA	NA	NA	NA	15q25.1	NA	Name=BAF155,JunD,AP-2alpha,c-Jun,STAT3,AP-2gamma	Name=98	NA	rs4778827	0.04	0.04	0.047	0.0499201	NA	NA	0.0043	0.1868	NA	NA	NA	0.01	0.18	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.721635	NA	NA	NA	NA	NA	0.065	NA	6.3333333
1019	16	15082865	15082865	C	T	intronic	PDXDC1	NA	NA	NA	ncRNA_exonic	ENSG00000261819	NA	NA	NA	Score=617;Name=lod=430	Name=Phospholipid levels (plasma)	16p13.11	NA	NA	NA	NA	rs4985167	0.31	0.31	0.229	NA	NA	NA	NA	NA	NA	0.27	0.45	0.39	0.14	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.646133	NA	0.25	NA	NA	NA	0.275	NA	6.3333333
1019	21	11039450	11039450	A	G	intronic	BAGE2,BAGE3,BAGE4,BAGE5	NA	NA	NA	ncRNA_intronic	ENSG00000187172	NA	NA	NA	Score=272;Name=lod=17	NA	21p11.1	NA	NA	Name=6	NA	rs3915344	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.493871	NA	NA	NA	NA	NA	0.333	NA	6.3333333
1019	11	10555707	10555707	A	T	UTR5	RNF141	NM_016422:c.-2T>A	NA	NA	UTR5	ENSG00000110315	ENST00000265981:c.-2T>A,ENST00000528665:c.-2T>A,ENST00000533412:c.-2T>A,ENST00000530156:c.-2T>A	NA	NA	Score=505;Name=lod=151	NA	11p15.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00003306	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.458246	2.458246	NA	NA	NA	NA	NA	NA	6.3333003
1019	15	41195551	41195551	C	T	UTR3	VPS18	NM_020857:c.*12C>T	NA	NA	UTR3	ENSG00000104142	ENST00000220509:c.*12C>T	NA	NA	NA	NA	15q15.1	NA	Name=CTCF	Name=6	NA	rs187027964	0.0009	0.0009	NA	0.000599042	NA	NA	0.0043	NA	NA	NA	NA	0.01	NA	0.0002	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.054557	2.054557	NA	NA	NA	NA	0.007	NA	6.3331334
1019	7	137028280	137028280	T	C	UTR5	PTN	NM_002825:c.-88560A>G	NA	NA	UTR5	ENSG00000105894	ENST00000348225:c.-88560A>G,ENST00000393083:c.-88560A>G	NA	NA	NA	NA	7q33	NA	Name=TAF1,Pol2,HA-E2F1	Name=80	NA	rs201968835	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0003	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.327067	1.327067	NA	NA	NA	NA	NA	NA	6.3330334
1019	7	100552135	100552135	T	C	intergenic	ACHE,MUC12	dist=58594;dist=60769	NA	NA	exonic	ENSG00000169894	NA	nonsynonymous SNV	ENSG00000169894:ENST00000319509:exon1:c.T886C:p.S296P	NA	NA	7q22.1	NA	NA	NA	NA	rs62483700	NA	NA	NA	0.000199681	0.001	NA	NA	NA	NA	NA	NA	NA	NA	0.4997	0.4	1	T	0.0	B	0.0	B	.	.	1.000	N	0	N	3.16	T	-0.922	T	0.008	T	0.065	-2.266	0.004	-0.681	-0.724	-1.218	2.981	-2.265895	NA	0.74	NA	NA	NA	0.391	NA	6.3326334
1019	1	161199781	161199781	C	T	UTR3	TOMM40L	NM_032174:c.*896C>T	NA	NA	UTR3	ENSG00000158882	ENST00000367988:c.*896C>T,ENST00000367987:c.*896C>T	NA	NA	NA	NA	1q23.3	NA	Name=CTCF,Rad21,CTCF_(SC-5916)	Name=19	NA	rs35103872	0.01	0.01	0.006	0.0131789	0.001	NA	0.0072	0.0454	NA	NA	NA	0.01	0.03	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.835092	1.835092	NA	NA	NA	NA	NA	NA	6.3323334
1019	3	152880401	152880401	A	C	UTR5	RAP2B	NM_002886:c.-82A>C	NA	NA	UTR5	ENSG00000181467	ENST00000323534:c.-82A>C	NA	NA	NA	NA	3q25.2	NA	NA	Name=87	NA	NA	NA	NA	NA	0.000199681	0.001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.437408	2.437408	NA	NA	NA	NA	NA	NA	6.3323334
1019	11	83501434	83501434	C	T	intronic	DLG2	NA	NA	NA	ncRNA_exonic	ENSG00000254629	NA	NA	NA	Score=762;Name=lod=1672	NA	11q14.1	NA	NA	NA	NA	NA	NA	NA	NA	0.00339457	0.001	NA	NA	NA	0.0164	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.037251	NA	NA	NA	NA	NA	NA	NA	6.3323333
1019	9	36169598	36169598	T	C	exonic	CCIN	NA	synonymous SNV	CCIN:NM_005893:exon1:c.T99C:p.S33S	exonic	ENSG00000185972	NA	synonymous SNV	ENSG00000185972:ENST00000335119:exon1:c.T99C:p.S33S	Score=618;Name=lod=433	NA	9p13.3	Score=778;Name=V$HTF_01	NA	NA	NA	rs3739609	0.46	0.46	0.474	0.501797	0.4473	0.503	0.2968	0.5923	0.5798	0.44	0.47	0.31	0.59	0.4405	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.118709	NA	NA	0.446977	0.579437	NA	0.493	NA	6.3318896
1019	1	111862074	111862074	C	T	exonic	CHIA	NA	synonymous SNV	CHIA:NM_001258002:exon7:c.C678T:p.L226L,CHIA:NM_021797:exon8:c.C837T:p.L279L,CHIA:NM_001040623:exon9:c.C678T:p.L226L,CHIA:NM_001258003:exon9:c.C837T:p.L279L,CHIA:NM_001258001:exon10:c.C837T:p.L279L,CHIA:NM_001258005:exon10:c.C678T:p.L226L,CHIA:NM_001258004:exon11:c.C678T:p.L226L,CHIA:NM_201653:exon11:c.C1161T:p.L387L	exonic	ENSG00000134216	NA	synonymous SNV	ENSG00000134216:ENST00000483391:exon7:c.C678T:p.L226L,ENSG00000134216:ENST00000422815:exon8:c.C993T:p.L331L,ENSG00000134216:ENST00000489524:exon8:c.C678T:p.L226L,ENSG00000134216:ENST00000353665:exon9:c.C678T:p.L226L,ENSG00000134216:ENST00000430615:exon9:c.C837T:p.L279L,ENSG00000134216:ENST00000343320:exon10:c.C1161T:p.L387L,ENSG00000134216:ENST00000451398:exon10:c.C678T:p.L226L,ENSG00000134216:ENST00000369740:exon11:c.C1161T:p.L387L	NA	NA	1p13.2	NA	Name=MEF2A,NFKB	NA	NA	rs2820092	0.14	0.14	0.139	0.17492	0.0994	0.0923	0.1037	0.354	0.1462	0.08	0.09	0.11	0.32	0.127	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.129298	NA	NA	0.108605	0.306627	NA	0.261	NA	6.3316616
1019	19	55143491	55143491	G	T	exonic	LILRB1	NA	nonsynonymous SNV	LILRB1:NM_001081637:exon5:c.G464T:p.S155I,LILRB1:NM_001081638:exon5:c.G464T:p.S155I,LILRB1:NM_001081639:exon5:c.G464T:p.S155I,LILRB1:NM_006669:exon6:c.G464T:p.S155I	exonic	ENSG00000104972	NA	nonsynonymous SNV	ENSG00000104972:ENST00000396315:exon4:c.G464T:p.S155I,ENSG00000104972:ENST00000396317:exon4:c.G464T:p.S155I,ENSG00000104972:ENST00000396321:exon4:c.G464T:p.S155I,ENSG00000104972:ENST00000418536:exon4:c.G464T:p.S155I,ENSG00000104972:ENST00000421584:exon4:c.G464T:p.S155I,ENSG00000104972:ENST00000427581:exon4:c.G572T:p.S191I,ENSG00000104972:ENST00000448689:exon4:c.G464T:p.S155I,ENSG00000104972:ENST00000324602:exon5:c.G464T:p.S155I,ENSG00000104972:ENST00000396327:exon5:c.G464T:p.S155I,ENSG00000104972:ENST00000396332:exon5:c.G464T:p.S155I,ENSG00000104972:ENST00000434867:exon5:c.G464T:p.S155I,ENSG00000104972:ENST00000396331:exon6:c.G464T:p.S155I	NA	NA	19q13.42	NA	NA	NA	NA	rs1061681	0.4	0.4	0.409	0.45008	0.2783	0.5952	0.4755	0.5862	0.2751	0.24	0.53	0.4	0.49	0.3929	0.55	1	T	0.001	B	0.0	B	0.128	N	1.000	P	-2.035	N	3.81	T	-0.903	T	0.000	T	0.112	-2.381	0.004	0.317	-0.293	-0.921	2.438	-2.38126	NA	1	0.331047	0.550386	ID=COSM1396328;OCCURENCE=1(large_intestine)	0.536	NA	6.3310864
1019	5	43294192	43294192	C	T	exonic	HMGCS1	NA	synonymous SNV	HMGCS1:NM_002130:exon7:c.G1149A:p.L383L,HMGCS1:NM_001098272:exon8:c.G1149A:p.L383L	exonic	ENSG00000112972	NA	synonymous SNV	ENSG00000112972:ENST00000433297:exon7:c.G1149A:p.L383L,ENSG00000112972:ENST00000325110:exon8:c.G1149A:p.L383L	Score=426;Name=lod=72	NA	5p12	NA	NA	NA	NA	rs56257144	0.06	0.06	0.054	0.0607029	0.1173	0.002	0.0663	0.0227	0.1104	0.11	0.0035	0.07	0.02	0.0954	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.207511	NA	NA	0.123023	0.037676	NA	0.029	NA	6.3309436
1019	19	41869392	41869392	T	C	exonic	B9D2	NA	nonsynonymous SNV	B9D2:NM_030578:exon2:c.A33G:p.I11M	exonic	ENSG00000123810	NA	nonsynonymous SNV	ENSG00000123810:ENST00000243578:exon2:c.A33G:p.I11M,ENSG00000123810:ENST00000594416:exon2:c.A33G:p.I11M	NA	NA	19q13.2	Score=850;Name=V$GATA1_03	NA	NA	NA	rs2241714	0.65	0.65	0.662	0.649561	0.675	0.4464	0.5461	0.8608	0.6207	0.68	0.48	0.59	0.85	0.655	0.85	0.11	T	0.001	B	0.005	B	0.063	N	0.000	P	1.725	L	-0.44	T	-1.030	T	0.000	T	0.036	1.538	11.1	-1.13	-0.144	-0.226	5.371	1.538474	1.538474	0.22	0.672791	0.825465	NA	0.696	NA	6.3305424
1019	1	43392690	43392690	C	T	UTR3	SLC2A1	NM_006516:c.*22G>A	NA	NA	UTR3	ENSG00000117394	ENST00000426263:c.*22G>A	NA	NA	Score=336;Name=lod=31	NA	1p34.2	NA	NA	Name=6	NA	rs2229683	0.0009	0.0009	NA	0.000998403	0.002	NA	0.0014	0.0015	NA	0.0026	NA	NA	NA	0.0004	0.0026	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.438387	1.438387	NA	0.000465	0	NA	NA	NA	6.3304684
1019	6	32548581	32548581	A	G	exonic	HLA-DRB1	NA	synonymous SNV	HLA-DRB1:NM_002124:exon4:c.T705C:p.F235F	exonic	ENSG00000196126	NA	synonymous SNV	ENSG00000196126:ENST00000360004:exon4:c.T705C:p.F235F	Score=376;Name=lod=45	NA	6p21.32	NA	NA	NA	NA	rs113175445	NA	NA	0.259	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3363	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.202899	NA	NA	NA	NA	ID=COSM150071;OCCURENCE=1(stomach)	0.022	NA	6.3303666
1019	6	168343838	168343838	T	C	exonic	MLLT4	NA	synonymous SNV	MLLT4:NM_001207008:exon22:c.T3060C:p.Y1020Y,MLLT4:NM_001040000:exon23:c.T3108C:p.Y1036Y	exonic	ENSG00000130396	NA	synonymous SNV	ENSG00000130396:ENST00000344191:exon23:c.T3108C:p.Y1036Y,ENSG00000130396:ENST00000392108:exon23:c.T3108C:p.Y1036Y,ENSG00000130396:ENST00000392112:exon23:c.T3060C:p.Y1020Y,ENSG00000130396:ENST00000400822:exon23:c.T3105C:p.Y1035Y,ENSG00000130396:ENST00000447894:exon23:c.T3108C:p.Y1036Y,ENSG00000130396:ENST00000351017:exon24:c.T3129C:p.Y1043Y,ENSG00000130396:ENST00000366806:exon24:c.T3108C:p.Y1036Y	Score=536;Name=lod=202	NA	6q27	Score=870;Name=V$CDC5_01	NA	NA	NA	rs1132306	0.53	0.53	0.504	0.55631	0.4066	0.7927	0.5605	0.4138	0.6564	0.43	0.78	0.55	0.37	0.5047	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.242901	1.242901	NA	0.425233	0.418066	NA	0.413	NA	6.3301336
1019	6	10695198	10695198	A	C	UTR5	PAK1IP1	NM_017906:c.-21A>C	NA	NA	UTR5	ENSG00000111845	ENST00000379568:c.-21A>C	NA	NA	NA	NA	6p24.2	NA	Name=p300,USF-1,BHLHE40,NF-E2_(H-230),IRF1,CHD2_(N-1250),TBP,ELF1_(SC-631),NFKB,HEY1,Max,c-Myc,SRF,SIX5,Oct-2,PAX5-C20,YY1,Pol2,SP1,ATF3,Mxi1_(bHLH),HDAC2_(SC-6296),KAP1,MEF2A,Pol2-4H8,USF1_(SC-8983),E2F6,BRCA1_(C-1863),Sin3Ak-20,YY1_(C-20),BCLAF1_(M33-P5B11),SIRT6,TAF1,GATA-1,E2F6_(H-50),USF2,GABP,ELK4,POU2F2	Name=148	NA	rs112419636	0.01	0.01	0.008	0.00978435	NA	NA	0.0014	0.0363	NA	NA	NA	0.0028	0.02	0.003	0.029	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.787766	1.787766	NA	0.000233	0.028597	NA	NA	NA	6.3301004
1019	11	65168281	65168281	C	T	exonic	FRMD8	NA	synonymous SNV	FRMD8:NM_031904:exon9:c.C1014T:p.F338F	exonic	ENSG00000126391	NA	synonymous SNV	ENSG00000126391:ENST00000355991:exon8:c.C846T:p.F282F,ENSG00000126391:ENST00000416776:exon8:c.C912T:p.F304F,ENSG00000126391:ENST00000317568:exon9:c.C1014T:p.F338F	Score=540;Name=lod=209	NA	11q13.1	NA	NA	NA	NA	rs2073801	0.16	0.16	0.171	0.201278	0.0825	0.2024	0.1686	0.2163	0.3252	0.09	0.21	0.16	0.23	0.1513	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.17511	NA	NA	0.102862	0.185825	NA	0.13	NA	6.3300046
1019	16	55862836	55862836	G	A	exonic	CES1	NA	synonymous SNV	CES1:NM_001025194:exon2:c.C100T:p.L34L,CES1:NM_001025195:exon2:c.C103T:p.L35L,CES1:NM_001266:exon2:c.C100T:p.L34L	exonic	ENSG00000198848	NA	synonymous SNV	ENSG00000198848:ENST00000360526:exon2:c.C103T:p.L35L,ENSG00000198848:ENST00000361503:exon2:c.C100T:p.L34L,ENSG00000198848:ENST00000422046:exon2:c.C100T:p.L34L	Score=374;Name=lod=44	NA	16q12.2	NA	NA	NA	NA	rs3826191	NA	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3371	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.67894	NA	NA	NA	NA	ID=COSM1378426;OCCURENCE=1(large_intestine)	NA	NA	6.3295666
1019	10	135086073	135086073	T	C	exonic	ADAM8	NA	nonsynonymous SNV	ADAM8:NM_001164490:exon8:c.A605G:p.N202S,ADAM8:NM_001109:exon9:c.A722G:p.N241S,ADAM8:NM_001164489:exon9:c.A722G:p.N241S	exonic	ENSG00000151651	NA	nonsynonymous SNV	ENSG00000151651:ENST00000485491:exon8:c.A605G:p.N202S,ENSG00000151651:ENST00000415217:exon9:c.A722G:p.N241S,ENSG00000151651:ENST00000445355:exon9:c.A722G:p.N241S	NA	NA	10q26.3	NA	NA	NA	NA	rs143275708	NA	NA	NA	0.000399361	0.002	NA	NA	NA	NA	NA	NA	NA	NA	0.0007	0.0013	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.321908	1.321908	0.27	0.001279	0.000227	NA	NA	NA	6.3293544
1019	7	55268916	55268916	C	T	exonic	EGFR	NA	synonymous SNV	EGFR:NM_005228:exon25:c.C2982T:p.D994D	exonic	ENSG00000146648	NA	synonymous SNV	ENSG00000146648:ENST00000455089:exon24:c.C2847T:p.D949D,ENSG00000146648:ENST00000275493:exon25:c.C2982T:p.D994D,ENSG00000146648:ENST00000454757:exon25:c.C2823T:p.D941D	Score=433;Name=lod=77	NA	7p11.2	NA	NA	NA	NA	rs2293347	0.14	0.14	0.11	0.141773	0.1113	0.247	0.1542	0.0129	0.2301	0.11	0.26	0.16	0.01	0.1337	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.144905	NA	NA	0.092442	0.027463	NA	0.065	NA	6.3292246
1019	14	89291027	89291027	G	A	UTR5	TTC8	NM_144596:c.-25G>A,NM_198309:c.-25G>A,NM_198310:c.-25G>A	NA	NA	UTR5	ENSG00000165533	ENST00000556077:c.-25G>A,ENST00000553718:c.-25G>A,ENST00000345383:c.-25G>A,ENST00000536576:c.-32514G>A,ENST00000338104:c.-25G>A,ENST00000346301:c.-25G>A,ENST00000354441:c.-25G>A,ENST00000380656:c.-25G>A,ENST00000555057:c.-25G>A	NA	NA	NA	NA	14q31.3	NA	Name=Sin3Ak-20,HA-E2F1,Pol2-4H8,ZNF263,RFX5_(N-494),Egr-1,YY1,TBP,c-Myc,ZBTB7A_(SC-34508),HEY1,TAF7_(SQ-8),YY1_(C-20),NRSF,Mxi1_(bHLH),Pol2,Pol2(phosphoS2),ETS1,TAF1,Max	Name=148	NA	rs7145692	0.0014	0.0014	NA	0.00279553	0.001	NA	0.0058	0.0068	NA	NA	NA	0.01	0.002	0.003	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.497335	NA	NA	0.000349	0.005925	NA	NA	NA	6.3289844
1019	10	127530325	127530325	T	C	exonic	DHX32	NA	synonymous SNV	DHX32:NM_018180:exon7:c.A1530G:p.A510A	exonic	ENSG00000089876	NA	synonymous SNV	ENSG00000089876:ENST00000368721:exon4:c.A402G:p.A134A,ENSG00000089876:ENST00000284688:exon6:c.A1287G:p.A429A,ENSG00000089876:ENST00000284690:exon7:c.A1530G:p.A510A	Score=483;Name=lod=123	NA	10q26.2	Score=894;Name=V$RFX1_02	NA	NA	NA	rs3208565	0.43	0.43	0.435	0.454073	0.4443	0.3234	0.3487	0.5961	0.4816	0.44	0.33	0.37	0.57	0.4339	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.086541	NA	NA	0.459535	0.574671	ID=COSM147080;OCCURENCE=1(stomach)	0.464	NA	6.3289316
1019	1	78340788	78340788	T	C	UTR3	FAM73A	NM_198549:c.*39T>C,NM_001270384:c.*39T>C	NA	NA	UTR3	ENSG00000180488	ENST00000370791:c.*39T>C,ENST00000443751:c.*39T>C	NA	NA	NA	NA	1p31.1	NA	Name=AP-2alpha,AP-2gamma,GR	Name=65	NA	rs377659984	NA	NA	NA	0.000199681	NA	NA	NA	NA	0.001	NA	NA	NA	NA	0.0023	0.0024	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.943657	NA	NA	0.002442	0.000227	NA	NA	NA	6.3285914
1019	16	11969724	11969724	G	C	exonic	GSPT1	NA	synonymous SNV	GSPT1:NM_001130006:exon14:c.C1752G:p.V584V,GSPT1:NM_001130007:exon14:c.C1341G:p.V447V,GSPT1:NM_002094:exon14:c.C1755G:p.V585V	exonic	ENSG00000103342	NA	synonymous SNV	ENSG00000103342:ENST00000563468:exon12:c.C1341G:p.V447V,ENSG00000103342:ENST00000420576:exon14:c.C1341G:p.V447V,ENSG00000103342:ENST00000434724:exon14:c.C1755G:p.V585V,ENSG00000103342:ENST00000439887:exon14:c.C1752G:p.V584V	Score=701;Name=lod=942	NA	16p13.13	NA	Name=MafK_(SC-477),MafK_(ab50322)	NA	NA	rs33657	0.62	0.62	0.66	0.650958	0.4394	0.7917	0.5461	0.7761	0.6288	0.43	0.85	0.52	0.71	0.503	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.94583	NA	NA	0.395751	0.701758	NA	0.659	NA	6.3285156
1019	20	60713311	60713311	G	A	exonic	PSMA7	NA	synonymous SNV	PSMA7:NM_002792:exon5:c.C507T:p.R169R	exonic	ENSG00000101182	NA	synonymous SNV	ENSG00000101182:ENST00000370861:exon5:c.C297T:p.R99R,ENSG00000101182:ENST00000370873:exon5:c.C507T:p.R169R	Score=569;Name=lod=274	NA	20q13.33	NA	Name=Pol2	NA	NA	rs7076	0.65	0.65	0.635	0.598243	0.8032	0.7738	0.7392	0.143	0.7219	0.81	0.8	0.76	0.16	0.739	0.81	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.013	T	0.000	T	.	-0.43	1.999	-1.69	-0.567	-0.355	6.494	-0.429897	NA	NA	0.796977	0.254426	NA	0.58	NA	6.3274896
1019	1	151826095	151826095	A	G	UTR5	THEM5	NM_182578:c.-54T>C	NA	NA	UTR5	ENSG00000196407	ENST00000368817:c.-54T>C	NA	NA	NA	NA	1q21.3	Score=908;Name=V$AP1FJ_Q2	Name=CEBPB,CTCF	NA	NA	rs185055265	0.0023	0.0023	NA	0.00179712	0.006	NA	0.0043	NA	NA	0.004	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.821409	NA	NA	NA	NA	NA	NA	NA	6.3273334
1019	5	158743882	158743882	T	C	intronic	IL12B	NA	NA	NA	ncRNA_intronic	ENSG00000249738	NA	NA	NA	NA	NA	5q33.3	NA	Name=CTCF,Rad21,YY1_(C-20),CTCF_(SC-5916),SMC3_(ab9263),FOXA1_(C-20),Znf143_(16618-1-AP)	Name=139	NA	rs191112662	0.0023	0.0023	NA	0.00199681	0.006	NA	0.0029	0.0015	NA	0.004	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.447245	NA	NA	NA	NA	NA	NA	NA	6.3273333
1019	17	19645938	19645938	A	C	exonic	ALDH3A1	NA	nonsynonymous SNV	ALDH3A1:NM_001135168:exon3:c.T400G:p.S134A,ALDH3A1:NM_000691:exon4:c.T400G:p.S134A,ALDH3A1:NM_001135167:exon4:c.T400G:p.S134A	exonic	ENSG00000108602	NA	nonsynonymous SNV	ENSG00000108602:ENST00000426645:exon3:c.T370G:p.S124A,ENSG00000108602:ENST00000457500:exon3:c.T400G:p.S134A,ENSG00000108602:ENST00000494157:exon3:c.T181G:p.S61A,ENSG00000108602:ENST00000225740:exon4:c.T400G:p.S134A,ENSG00000108602:ENST00000395555:exon4:c.T400G:p.S134A,ENSG00000108602:ENST00000439102:exon4:c.T400G:p.S134A,ENSG00000108602:ENST00000444455:exon4:c.T400G:p.S134A,ENSG00000108602:ENST00000468746:exon4:c.T400G:p.S134A	NA	NA	17p11.2	NA	NA	NA	NA	rs887241	0.73	0.73	0.731	0.744609	0.6441	0.9524	0.7334	0.6377	0.7863	0.64	0.94	0.71	0.64	0.7042	0.94	0.47	T	0.0	B	0.0	B	0.000	N	1.000	P	-1.785	N	-0.9	T	-0.969	T	0.000	T	0.047	-1.697	0.011	3.64	0.396	0.629	7.060	-1.697205	NA	0.39	0.658605	0.642987	NA	0.703	NA	6.3264284
1019	15	90168693	90168693	T	A	exonic	TICRR	NA	nonsynonymous SNV	TICRR:NM_152259:exon20:c.T5152A:p.S1718T	exonic	ENSG00000140534	NA	nonsynonymous SNV	ENSG00000140534:ENST00000268138:exon20:c.T5152A:p.S1718T,ENSG00000140534:ENST00000560985:exon20:c.T5149A:p.S1717T	NA	NA	15q26.1	NA	NA	NA	NA	rs1866928	0.36	0.36	0.373	0.385982	0.335	0.3968	0.3285	0.466	0.3599	0.34	0.35	0.31	0.43	0.3355	0.43	0.13	T	0.025	B	0.002	B	0.694	N	1.000	P	-0.345	N	3.13	T	-0.919	T	0.000	T	0.165	1.173	9.772	0.722	0.356	0.220	5.156	1.17302	NA	0.14	0.336823	0.4075	NA	0.355	NA	6.3260104
1019	17	4805186	4805186	C	A	UTR3	C17orf107	NM_001145536:c.*1358C>A	NA	NA	UTR3	ENSG00000205710	ENST00000381365:c.*1358C>A	NA	NA	NA	NA	17p13.2	NA	Name=STAT3	Name=28	NA	rs59963145	0.01	0.01	0.012	0.0223642	NA	NA	0.0029	0.0817	0.002	NA	NA	NA	0.06	0.0072	0.062	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.456359	1.456359	NA	0.000466	0.062215	NA	0.022	NA	6.3256674
1019	1	76251949	76251949	T	A	UTR5	RABGGTB	NM_004582:c.-8T>A	NA	NA	UTR5;UTR3	ENSG00000137955;ENSG00000117054	ENST00000535300:c.-5251T>A,ENST00000319942:c.-8T>A,ENST00000370826:c.-8T>A;ENST00000528016:c.*253T>A	NA	NA	NA	NA	1p31.1	NA	Name=Pol2,PU.1,RFX5_(N-494),NRSF,Ini1,Pol2(phosphoS2),YY1,YY1_(C-20),Sin3Ak-20,TAF7_(SQ-8),KAP1,MEF2A,Pol2-4H8,Pol2(b),TAF1,WHIP,POU2F2,p300_(N-15),GTF2B,TCF12,Nrf1,TBP,GTF2F1_(RAP-74),ELF1_(SC-631),Rad21,HEY1,NFKB,Oct-2	Name=148	NA	rs141344826	0.01	0.01	0.005	0.00399361	0.003	NA	0.0072	0.0068	0.0031	0.004	NA	0.01	0.01	0.0028	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.836164	NA	NA	0.001977	0.008625	NA	0.014	NA	6.3255564
1019	10	77160151	77160151	G	C	intronic	ZNF503	NA	NA	NA	ncRNA_intronic	ENSG00000270087	NA	NA	NA	NA	NA	10q22.2	NA	NA	Name=18	NA	NA	NA	NA	NA	0.00179712	0.005	NA	0.0058	NA	NA	NA	NA	NA	NA	0.0032	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.955362	1.955362	NA	NA	NA	NA	NA	NA	6.3251333
1020	3	95374182	95374182	T	C	ncRNA_exonic	LOC100287639	NA	NA	NA	ncRNA_exonic	ENSG00000244681	NA	NA	NA	Score=490;Name=lod=131	NA	3q11.2	NA	NA	Name=4	NA	rs6767658	0.27	0.27	0.24	0.263978	0.3419	0.2569	0.1671	0.2526	0.2751	0.32	0.26	0.18	0.24	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.102623	NA	NA	NA	NA	NA	0.297	NA	6.3247666
1020	3	191074873	191074873	C	G	intronic	CCDC50	NA	NA	NA	intronic	ENSG00000152492	NA	NA	NA	NA	NA	3q28	Score=833;Name=V$GFI1_01	Name=AP-2gamma,Rad21,c-Fos	Name=89	NA	rs188384	0.74	0.74	0.761	0.770966	0.5408	0.9157	0.6974	0.9191	0.7106	0.54	0.92	0.67	0.9	0.6259	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.789424	NA	NA	0.508605	0.846119	NA	0.659	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000041445.1;CLNDSDB=.;CLNDSDBID=.	6.324695
1020	18	72344238	72344238	C	T	exonic	ZNF407	NA	synonymous SNV	ZNF407:NM_001146189:exon1:c.C1263T:p.L421L,ZNF407:NM_001146190:exon1:c.C1263T:p.L421L,ZNF407:NM_017757:exon1:c.C1263T:p.L421L	exonic	ENSG00000215421	NA	synonymous SNV	ENSG00000215421:ENST00000299687:exon1:c.C1263T:p.L421L,ENSG00000215421:ENST00000309902:exon1:c.C1263T:p.L421L,ENSG00000215421:ENST00000577538:exon1:c.C1263T:p.L421L,ENSG00000215421:ENST00000582337:exon2:c.C1263T:p.L421L	NA	NA	18q22.3	NA	NA	NA	NA	rs17817969	0.08	0.08	0.082	0.0678914	0.1064	0.002	0.0663	0.112	0.0378	0.12	NA	0.07	0.12	0.0967	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.766298	1.766298	NA	0.138923	0.102926	NA	0.072	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118931.2;CLNDSDB=.;CLNDSDBID=.	6.3246436
1020	7	140051091	140051091	G	A	exonic	SLC37A3	NA	synonymous SNV	SLC37A3:NM_032295:exon9:c.C864T:p.C288C,SLC37A3:NM_207113:exon9:c.C864T:p.C288C	exonic	ENSG00000157800	NA	synonymous SNV	ENSG00000157800:ENST00000326232:exon9:c.C864T:p.C288C,ENSG00000157800:ENST00000340308:exon9:c.C864T:p.C288C,ENSG00000157800:ENST00000447932:exon9:c.C864T:p.C288C	Score=464;Name=lod=103	NA	7q34	NA	NA	NA	NA	rs12703775	0.4	0.4	0.385	0.382188	0.4553	0.4137	0.3703	0.3026	0.3906	0.46	0.4	0.4	0.31	0.4294	0.46	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.913	T	0.000	T	.	1.111	9.531	1.4	0.035	0.753	9.311	1.110842	NA	NA	0.457442	0.329324	ID=COSM150403;OCCURENCE=1(stomach)	0.457	NA	6.3245246
1020	16	67203777	67203777	G	T	UTR3	HSF4	NM_001040667:c.*89G>T,NM_001538:c.*89G>T	NA	NA	UTR3	ENSG00000102878	ENST00000421453:c.*89G>T,ENST00000264009:c.*89G>T,ENST00000522295:c.*820G>T,ENST00000434833:c.*516G>T,ENST00000521314:c.*1315G>T,ENST00000523562:c.*798G>T,ENST00000521624:c.*312G>T,ENST00000584272:c.*89G>T,ENST00000520528:c.*636G>T,ENST00000520304:c.*73G>T,ENST00000521916:c.*147G>T	NA	NA	NA	NA	16q22.1	NA	Name=CTCF_(C-20),ZBTB7A_(SC-34508),HDAC2_(SC-6296),CTCF_(SC-5916),YY1,Rad21,CTCF,CTCFL_(SC-98982),YY1_(C-20),SMC3_(ab9263)	Name=43	NA	rs11642409	0.0032	0.0032	0.002	0.00219649	0.0089	NA	0.0014	0.0008	NA	0.01	NA	0.0028	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.306148	2.306148	NA	NA	NA	NA	NA	NA	6.3244334
1020	18	72344553	72344553	G	A	exonic	ZNF407	NA	synonymous SNV	ZNF407:NM_001146189:exon1:c.G1578A:p.T526T,ZNF407:NM_001146190:exon1:c.G1578A:p.T526T,ZNF407:NM_017757:exon1:c.G1578A:p.T526T	exonic	ENSG00000215421	NA	synonymous SNV	ENSG00000215421:ENST00000299687:exon1:c.G1578A:p.T526T,ENSG00000215421:ENST00000309902:exon1:c.G1578A:p.T526T,ENSG00000215421:ENST00000577538:exon1:c.G1578A:p.T526T,ENSG00000215421:ENST00000582337:exon2:c.G1578A:p.T526T	NA	NA	18q22.3	NA	NA	NA	NA	rs7227391	0.08	0.08	0.091	0.0680911	0.1064	0.003	0.0663	0.112	0.0378	0.12	0.0017	0.07	0.12	0.0972	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.018328	NA	NA	0.139002	0.10005	NA	0.072	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118933.2;CLNDSDB=.;CLNDSDBID=.	6.3240646
1020	17	45759767	45759767	C	T	intronic	KPNB1	NA	NA	NA	intronic	ENSG00000108424	NA	NA	NA	Score=722;Name=lod=1151	NA	17q21.32	Score=802;Name=V$RSRFC4_01	Name=MafK_(ab50322),MafK_(SC-477),MafF_(M8194)	NA	NA	rs7223246	0.23	0.23	0.243	0.281749	0.2286	0.0883	0.1369	0.562	0.2597	0.22	0.09	0.16	0.47	0.2231	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.347616	1.347616	NA	0.225	0.479346	NA	0.21	NA	6.3233
1020	8	128748744	128748744	C	T	UTR5	MYC	NM_002467:c.-96C>T	NA	NA	UTR5	ENSG00000136997	ENST00000259523:c.-1765C>T,ENST00000517291:c.-96C>T,ENST00000377970:c.-96C>T,ENST00000524013:c.-96C>T,ENST00000520751:c.-1799C>T	NA	NA	NA	NA	8q24.21	NA	Name=Pol2(phosphoS2),Pol2,CtBP2,ZNF263,Pol2-4H8,Pol2(b)	Name=4	NA	rs4645949	0.01	0.01	0.002	0.00439297	0.0109	NA	0.0159	NA	NA	0.01	NA	0.02	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.902074	1.902074	NA	NA	NA	NA	0.007	NA	6.3224334
1020	9	134020092	134020092	C	T	exonic	NUP214	NA	nonsynonymous SNV	NUP214:NM_005085:exon12:c.C1720T:p.P574S	exonic	ENSG00000126883	NA	nonsynonymous SNV	ENSG00000126883:ENST00000359428:exon12:c.C1720T:p.P574S,ENSG00000126883:ENST00000411637:exon12:c.C1720T:p.P574S,ENSG00000126883:ENST00000451030:exon12:c.C1720T:p.P574S	Score=251;Name=lod=14	NA	9q34.13	NA	NA	NA	NA	rs103612	0.67	0.67	0.639	0.641973	0.6779	0.627	0.7522	0.6626	0.5143	0.68	0.63	0.74	0.63	0.6641	0.74	0.57	T	0.013	B	0.007	B	0.480	N	0.000	P	0	N	1.51	T	-0.996	T	0.000	T	0.148	0.999	9.078	1.78	0.816	-0.048	5.346	0.99854	NA	0.13	0.668953	0.66818	NA	0.58	NA	6.3223804
1020	3	178952181	178952181	T	C	UTR3	PIK3CA	NM_006218:c.*29T>C	NA	NA	UTR3	ENSG00000121879	ENST00000263967:c.*29T>C	NA	NA	NA	NA	3q26.32	NA	Name=CEBPB	Name=24	NA	rs141178472	0.0018	0.0018	0.003	0.000599042	0.003	NA	NA	NA	NA	0.01	NA	NA	NA	0.0029	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.654334	NA	NA	0.005569	0.001058	ID=COSM249908;OCCURENCE=1(pancreas),2(large_intestine)	NA	NA	6.3218644
1020	11	77378388	77378388	T	C	exonic	RSF1	NA	synonymous SNV	RSF1:NM_016578:exon16:c.A3900G:p.L1300L	exonic	ENSG00000048649	NA	synonymous SNV	ENSG00000048649:ENST00000480887:exon11:c.A3144G:p.L1048L,ENSG00000048649:ENST00000360355:exon15:c.A3807G:p.L1269L,ENSG00000048649:ENST00000308488:exon16:c.A3900G:p.L1300L	Score=588;Name=lod=327	NA	11q14.1	NA	NA	NA	NA	rs4945197	0.19	0.19	0.174	0.196286	0.0984	0.1736	0.2147	0.329	0.1278	0.1	0.19	0.19	0.35	0.15	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.01527	NA	NA	0.096808	0.303409	ID=COSM147293;OCCURENCE=1(stomach)	0.225	NA	6.3214586
1020	6	151336739	151336739	C	G	exonic	MTHFD1L	NA	synonymous SNV	MTHFD1L:NM_001242767:exon24:c.C2499G:p.S833S,MTHFD1L:NM_001242768:exon24:c.C2301G:p.S767S,MTHFD1L:NM_015440:exon24:c.C2496G:p.S832S	exonic	ENSG00000120254	NA	synonymous SNV	ENSG00000120254:ENST00000420192:exon2:c.C189G:p.S63S,ENSG00000120254:ENST00000367321:exon24:c.C2496G:p.S832S	NA	NA	6q25.1	NA	Name=TCF4	Name=29	NA	rs509474	0.59	0.59	0.618	0.570288	0.4374	0.6766	0.4726	0.8585	0.2771	0.41	0.67	0.46	0.87	0.4606	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.8617	NA	NA	0.447209	0.795279	NA	0.536	NA	6.3214576
1020	12	21715989	21715989	C	T	intronic	GYS2	NA	NA	NA	intronic	ENSG00000111713	NA	NA	NA	Score=443;Name=lod=84	NA	12p12.1	NA	Name=GR,FOXA2_(SC-6554),FOXA1_(SC-101058),p300,SP1,TCF4,HNF4A_(H-171),FOXA1_(C-20),FOSL2,HDAC2_(SC-6296)	Name=4	NA	rs8192697	0.2	0.2	0.176	0.176518	0.2386	0.2827	0.1787	0.0469	0.1769	0.23	0.27	0.21	0.04	0.2087	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.266011	NA	NA	0.231395	0.0867	NA	0.174	NA	6.321305
1020	11	77378505	77378505	A	G	exonic	RSF1	NA	synonymous SNV	RSF1:NM_016578:exon16:c.T3783C:p.D1261D	exonic	ENSG00000048649	NA	synonymous SNV	ENSG00000048649:ENST00000480887:exon11:c.T3027C:p.D1009D,ENSG00000048649:ENST00000360355:exon15:c.T3690C:p.D1230D,ENSG00000048649:ENST00000308488:exon16:c.T3783C:p.D1261D	Score=573;Name=lod=285	NA	11q14.1	NA	NA	NA	NA	rs28930682	0.19	0.19	0.178	0.196286	0.0984	0.1736	0.2147	0.329	0.1278	0.1	0.19	0.19	0.35	0.1512	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.293024	NA	NA	0.095876	0.301591	NA	0.225	NA	6.3211906
1020	1	185171869	185171869	A	G	exonic	SWT1	NA	nonsynonymous SNV	SWT1:NM_001105518:exon11:c.A1607G:p.H536R,SWT1:NM_017673:exon11:c.A1607G:p.H536R	exonic	ENSG00000116668	NA	nonsynonymous SNV	ENSG00000116668:ENST00000367500:exon11:c.A1607G:p.H536R,ENSG00000116668:ENST00000367501:exon11:c.A1607G:p.H536R	NA	NA	1q25.3	NA	NA	NA	NA	rs6698109	0.28	0.28	0.27	0.275559	0.341	0.1964	0.2464	0.2179	0.3885	0.34	0.24	0.24	0.26	0.3183	0.35	0.38	T	0.0	B	0.0	B	0.056	N	1.000	P	0	N	2.34	T	-0.896	T	0.000	T	0.023	0.685	7.659	-0.036	-0.187	0.715	4.889	0.684572	NA	0.21	0.353256	0.24739	NA	0.297	NA	6.3207774
1020	17	12898295	12898295	T	C	exonic	ELAC2	NA	synonymous SNV	ELAC2:NM_001165962:exon19:c.A1773G:p.T591T,ELAC2:NM_018127:exon20:c.A1893G:p.T631T,ELAC2:NM_173717:exon20:c.A1890G:p.T630T	exonic	ENSG00000006744	NA	synonymous SNV	ENSG00000006744:ENST00000426905:exon19:c.A1773G:p.T591T,ENSG00000006744:ENST00000338034:exon20:c.A1893G:p.T631T,ENSG00000006744:ENST00000395962:exon20:c.A1836G:p.T612T	NA	NA	17p12	Score=828;Name=V$MAX_01	NA	NA	NA	rs17552022	0.05	0.05	0.051	0.0503195	0.1203	0.001	0.0793	0.0053	0.0695	0.11	NA	0.07	0.01	0.0992	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.115234	NA	NA	0.127326	0.022469	NA	0.058	NA	6.3198406
1020	4	90647702	90647702	G	T	UTR3	SNCA	NM_001146054:c.*77C>A,NM_000345:c.*77C>A,NM_001146055:c.*77C>A,NM_007308:c.*77C>A	NA	NA	UTR3	ENSG00000145335	ENST00000420646:c.*77C>A,ENST00000394989:c.*77C>A,ENST00000345009:c.*77C>A,ENST00000336904:c.*77C>A,ENST00000394991:c.*77C>A,ENST00000394986:c.*77C>A,ENST00000508895:c.*77C>A	NA	NA	Score=528;Name=lod=187	NA	4q22.1	Score=766;Name=V$TCF11MAFG_01	NA	NA	NA	rs145304567	0.0037	0.0037	0.001	0.00299521	0.008	NA	0.0072	0.0015	NA	0.004	NA	0.01	0.002	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.543296	4.543296	NA	0.005971	0.000723	NA	NA	NA	6.3193624
1020	7	36446121	36446121	A	G	exonic	ANLN	NA	synonymous SNV	ANLN:NM_018685:exon4:c.A819G:p.L273L	exonic	ENSG00000011426	NA	synonymous SNV	ENSG00000011426:ENST00000429082:exon1:c.A111G:p.L37L,ENSG00000011426:ENST00000265748:exon4:c.A819G:p.L273L,ENSG00000011426:ENST00000396068:exon4:c.A819G:p.L273L	NA	NA	7p14.2	NA	NA	Name=37	NA	rs3735398	0.11	0.11	0.095	0.115615	0.1034	0.1786	0.1657	0.0522	0.1135	0.12	0.16	0.13	0.04	0.1307	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.433182	NA	NA	0.113605	0.067181	NA	0.145	NA	6.3189616
1020	20	56190634	56190634	C	T	exonic	ZBP1	NA	nonsynonymous SNV	ZBP1:NM_001160418:exon2:c.G37A:p.E13K,ZBP1:NM_001160417:exon3:c.G262A:p.E88K,ZBP1:NM_001160419:exon3:c.G262A:p.E88K,ZBP1:NM_030776:exon3:c.G262A:p.E88K	exonic	ENSG00000124256	NA	nonsynonymous SNV	ENSG00000124256:ENST00000395822:exon2:c.G37A:p.E13K,ENSG00000124256:ENST00000343535:exon3:c.G262A:p.E88K,ENSG00000124256:ENST00000371173:exon3:c.G262A:p.E88K,ENSG00000124256:ENST00000541799:exon3:c.G262A:p.E88K	NA	Name=Hippocampal atrophy	20q13.31	NA	NA	NA	NA	rs2073145	0.58	0.58	0.536	0.604633	0.6441	0.745	0.7205	0.2216	0.8548	0.66	0.73	0.68	0.2	0.6861	0.73	0.13	T	0.113	B	0.006	B	0.325	N	1.000	P	0.205	N	2.9	T	-0.983	T	0.000	T	0.099	0.561	7.034	-1.1	-0.152	-0.396	3.246	0.561172	NA	0.06	0.684419	0.311621	NA	0.601	NA	6.3187144
1020	16	2367336	2367336	G	A	exonic	ABCA3	NA	synonymous SNV	ABCA3:NM_001089:exon10:c.C1059T:p.F353F	exonic	ENSG00000167972	NA	synonymous SNV	ENSG00000167972:ENST00000301732:exon10:c.C1059T:p.F353F,ENSG00000167972:ENST00000382381:exon10:c.C1059T:p.F353F	Score=325;Name=lod=28	NA	16p13.3	NA	NA	NA	NA	rs13332514	0.19	0.19	0.152	0.192692	0.0934	0.372	0.3228	0.0764	0.1748	0.09	0.35	0.3	0.08	0.1572	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.290889	NA	NA	0.098488	0.087125	NA	0.167	NA	6.3175786
1020	2	80101321	80101321	T	G	exonic	CTNNA2	NA	synonymous SNV	CTNNA2:NM_001164883:exon6:c.T705G:p.A235A,CTNNA2:NM_004389:exon6:c.T705G:p.A235A	exonic	ENSG00000066032	NA	synonymous SNV	ENSG00000066032:ENST00000402739:exon5:c.T705G:p.A235A,ENSG00000066032:ENST00000540488:exon5:c.T705G:p.A235A,ENSG00000066032:ENST00000541047:exon5:c.T705G:p.A235A,ENSG00000066032:ENST00000361291:exon6:c.T807G:p.A269A,ENSG00000066032:ENST00000496558:exon6:c.T705G:p.A235A,ENSG00000066032:ENST00000466387:exon10:c.T705G:p.A235A	Score=381;Name=lod=47	NA	2p12	NA	NA	NA	NA	rs61291641	0.28	0.28	0.246	0.280152	0.0835	0.4425	0.4193	0.2799	0.2168	0.09	0.44	0.37	0.31	0.1898	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.217414	NA	NA	0.076285	0.219171	NA	0.261	NA	6.3170816
1020	12	56531154	56531154	T	C	exonic	ESYT1	NA	synonymous SNV	ESYT1:NM_001184796:exon17:c.T1965C:p.T655T,ESYT1:NM_015292:exon17:c.T1935C:p.T645T	exonic	ENSG00000139641	NA	synonymous SNV	ENSG00000139641:ENST00000267113:exon17:c.T1965C:p.T655T,ENSG00000139641:ENST00000394048:exon17:c.T1935C:p.T645T,ENSG00000139641:ENST00000541590:exon17:c.T1965C:p.T655T	Score=463;Name=lod=102	NA	12q13.2	NA	NA	NA	NA	rs2271192	0.16	0.16	0.162	0.184904	0.1153	0.0208	0.1081	0.4879	0.0706	0.12	0.03	0.1	0.44	0.1253	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.376104	NA	NA	0.109302	0.417839	NA	0.21	NA	6.3167646
1020	9	90321583	90321583	C	T	exonic	DAPK1	NA	synonymous SNV	DAPK1:NM_004938:exon26:c.C3597T:p.R1199R	exonic	ENSG00000196730	NA	synonymous SNV	ENSG00000196730:ENST00000491893:exon24:c.C3399T:p.R1133R,ENSG00000196730:ENST00000358077:exon26:c.C3597T:p.R1199R,ENSG00000196730:ENST00000408954:exon26:c.C3597T:p.R1199R,ENSG00000196730:ENST00000472284:exon26:c.C3597T:p.R1199R,ENSG00000196730:ENST00000469640:exon27:c.C3672T:p.R1224R	Score=444;Name=lod=85	NA	9q21.33	Score=915;Name=V$AREB6_03	NA	NA	NA	rs3118863	0.37	0.37	0.349	0.356629	0.4553	0.4107	0.402	0.121	0.4857	0.47	0.42	0.41	0.13	0.4399	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.387287	NA	NA	0.454759	0.179197	NA	0.319	NA	6.3167076
1020	12	124281322	124281322	T	C	exonic	DNAH10	NA	synonymous SNV	DNAH10:NM_207437:exon12:c.T1752C:p.H584H	exonic	ENSG00000197653	NA	synonymous SNV	ENSG00000197653:ENST00000409039:exon12:c.T1752C:p.H584H	Score=423;Name=lod=70	NA	12q24.31	NA	NA	NA	NA	rs76791219	0.17	0.17	0.173	0.180112	0.1093	0.0476	0.1196	0.4463	0.0726	0.11	0.06	0.15	0.4	0.1321	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.734368	NA	NA	0.108605	0.410576	NA	0.174	NA	6.3166616
1020	7	43843423	43843423	G	A	exonic	BLVRA	NA	synonymous SNV	BLVRA:NM_000712:exon7:c.G609A:p.V203V,BLVRA:NM_001253823:exon8:c.G609A:p.V203V	exonic	ENSG00000106605	NA	synonymous SNV	ENSG00000106605:ENST00000265523:exon7:c.G609A:p.V203V,ENSG00000106605:ENST00000402924:exon8:c.G609A:p.V203V	Score=517;Name=lod=169	NA	7p13	NA	NA	NA	NA	rs1131372	0.1	0.1	0.089	0.0898562	0.1223	0.0804	0.1657	0.053	0.0624	0.12	0.1	0.15	0.06	0.1175	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.083761	NA	NA	0.110349	0.054698	ID=COSM150275;OCCURENCE=1(stomach)	0.08	NA	6.3165176
1020	14	58831142	58831142	A	G	exonic	ARID4A	NA	nonsynonymous SNV	ARID4A:NM_002892:exon20:c.A2335G:p.T779A,ARID4A:NM_023000:exon20:c.A2335G:p.T779A,ARID4A:NM_023001:exon20:c.A2335G:p.T779A	exonic	ENSG00000032219	NA	nonsynonymous SNV	ENSG00000032219:ENST00000417477:exon10:c.A1369G:p.T457A,ENSG00000032219:ENST00000431317:exon19:c.A2335G:p.T779A,ENSG00000032219:ENST00000348476:exon20:c.A2335G:p.T779A,ENSG00000032219:ENST00000355431:exon20:c.A2335G:p.T779A,ENSG00000032219:ENST00000395168:exon20:c.A2335G:p.T779A	NA	NA	14q23.1	NA	NA	NA	NA	rs1051858	0.38	0.38	0.357	0.349441	0.34	0.5169	0.2291	0.3434	0.2802	0.37	0.53	0.27	0.32	0.3469	0.53	0.73	T	0.0	B	0.001	B	0.175	N	1.000	P	-0.55	N	2.59	T	-0.927	T	0.000	T	0.17	-0.779	0.733	1.52	-0.195	-0.111	2.154	-0.779318	NA	0.82	0.33042	0.341962	NA	0.312	NA	6.3160134
1020	1	35816593	35816593	T	G	intronic	ZMYM4	NA	NA	NA	ncRNA_exonic	ENSG00000229994	NA	NA	NA	Score=780;Name=lod=1972	NA	1p34.3	NA	NA	Name=3	NA	rs116667198	0.07	0.07	0.068	0.0960463	0.0179	0.0923	0.0202	0.1944	0.1012	0.02	0.06	0.02	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.169663	NA	NA	NA	NA	NA	0.058	NA	6.3154333
1020	15	42720288	42720288	G	C	exonic	ZNF106	NA	synonymous SNV	ZNF106:NM_022473:exon12:c.C4857G:p.L1619L	exonic	ENSG00000103994	NA	synonymous SNV	ENSG00000103994:ENST00000569648:exon1:c.C15G:p.L5L,ENSG00000103994:ENST00000565611:exon11:c.C2412G:p.L804L,ENSG00000103994:ENST00000263805:exon12:c.C4857G:p.L1619L,ENSG00000103994:ENST00000565380:exon13:c.C2541G:p.L847L	Score=550;Name=lod=229	NA	15q15.1	NA	NA	NA	NA	rs11544099	0.06	0.06	0.065	0.0521166	0.1173	0.006	0.0735	0.0431	0.0297	0.11	NA	0.08	0.04	0.0961	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.964299	NA	NA	0.138172	0.058557	NA	0.087	NA	6.3150946
1021	11	118949277	118949277	C	G	exonic	VPS11	NA	unknown	UNKNOWN	exonic	ENSG00000160695	NA	synonymous SNV	ENSG00000160695:ENST00000300793:exon13:c.C1923G:p.V641V	Score=568;Name=lod=271	NA	11q23.3	NA	NA	NA	NA	rs36008744	0.04	0.04	0.054	0.0383387	0.005	NA	0.0216	0.1301	NA	0.01	NA	0.01	0.17	0.0111	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.443423	1.443423	NA	0.002294	0.111053	NA	0.043	NA	6.3149393
1021	8	22054197	22054197	T	C	exonic	BMP1	NA	synonymous SNV	BMP1:NM_001199:exon14:c.T1770C:p.A590A,BMP1:NM_006129:exon14:c.T1770C:p.A590A	exonic	ENSG00000168487	NA	synonymous SNV	ENSG00000168487:ENST00000306349:exon14:c.T1770C:p.A590A,ENSG00000168487:ENST00000306385:exon14:c.T1770C:p.A590A,ENSG00000168487:ENST00000397816:exon14:c.T1770C:p.A590A,ENSG00000168487:ENST00000520970:exon14:c.T1770C:p.A590A,ENSG00000168487:ENST00000521385:exon14:c.T1770C:p.A590A	Score=474;Name=lod=113	NA	8p21.3	NA	NA	NA	NA	rs2229777	0.14	0.14	0.128	0.129992	0.1292	0.1806	0.0735	0.118	0.135	0.13	0.18	0.08	0.13	0.1176	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.851605	NA	NA	0.105349	0.112347	NA	0.087	NA	6.3145176
1021	2	75113657	75113657	C	T	exonic	HK2	NA	synonymous SNV	HK2:NM_000189:exon15:c.C2076T:p.N692N	exonic	ENSG00000159399	NA	synonymous SNV	ENSG00000159399:ENST00000290573:exon15:c.C2076T:p.N692N,ENSG00000159399:ENST00000409174:exon15:c.C1992T:p.N664N	Score=601;Name=lod=368	NA	2p12	Score=795;Name=V$TAXCREB_02	NA	NA	NA	rs2229626	0.5	0.5	0.54	0.511581	0.4662	0.4077	0.3458	0.7451	0.4673	0.47	0.42	0.39	0.72	0.4512	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.229854	NA	NA	0.435	0.68611	NA	0.486	NA	6.3142666
1021	7	141955128	141955128	C	T	exonic	PRSS58	NA	synonymous SNV	PRSS58:NM_001001317:exon4:c.G183A:p.K61K	exonic	ENSG00000258223	NA	synonymous SNV	ENSG00000258223:ENST00000552471:exon3:c.G183A:p.K61K,ENSG00000258223:ENST00000547058:exon4:c.G183A:p.K61K	NA	NA	7q34	NA	Name=JunD	NA	NA	rs1894317	0.18	0.18	0.171	0.199681	0.1044	0.1409	0.2565	0.3359	0.1339	0.09	0.14	0.26	0.31	0.1473	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.183647	NA	NA	0.100814	0.330458	NA	0.261	NA	6.3141526
1021	19	49994372	49994372	C	T	ncRNA_intronic	RPL13AP5	NA	NA	NA	intronic	ENSG00000142541	NA	NA	NA	NA	NA	19q13.33	NA	Name=Pol2(b),Pol2-4H8,HEY1,Pol2	Name=8	NA	rs117864235	0.0027	0.0027	0.005	0.00259585	0.007	NA	0.0043	0.0008	0.002	0.01	NA	0.0028	NA	0.0051	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.097087	NA	NA	0.007442	0.002043	NA	NA	NA	6.3137913
1021	1	248128929	248128929	G	A	exonic	OR2AK2	NA	nonsynonymous SNV	OR2AK2:NM_001004491:exon1:c.G296A:p.S99N	exonic	ENSG00000187080	NA	nonsynonymous SNV	ENSG00000187080:ENST00000366480:exon1:c.G296A:p.S99N	NA	NA	1q44	NA	NA	NA	NA	rs6664332	0.36	0.36	0.351	0.371605	0.328	0.4633	0.3646	0.2882	0.4397	0.33	0.44	0.39	0.27	0.3578	0.44	0.8	T	0.0	B	0.0	B	.	.	1.000	P	-1.62	N	5.3	T	-1.037	T	0.000	T	0.011	-1.794	0.01	1.92	-0.026	0.001	2.748	-1.7943	NA	1	0.333953	0.29074	NA	0.246	NA	6.3135804
1021	X	153693811	153693811	C	T	exonic	PLXNA3	NA	synonymous SNV	PLXNA3:NM_017514:exon12:c.C2289T:p.F763F	exonic	ENSG00000130827	NA	synonymous SNV	ENSG00000130827:ENST00000369682:exon12:c.C2289T:p.F763F	Score=516;Name=lod=167	NA	Xq28	NA	NA	NA	NA	rs5945429	0.29	0.29	0.32353	NA	NA	NA	NA	NA	NA	0.12	0.13	0.11	0.87	0.2214	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.896762	NA	NA	0.132432	0.790613	NA	0.261	NA	6.3128346
1021	6	155774608	155774608	C	T	exonic	NOX3	NA	synonymous SNV	NOX3:NM_015718:exon4:c.G270A:p.P90P	exonic	ENSG00000074771	NA	synonymous SNV	ENSG00000074771:ENST00000159060:exon4:c.G270A:p.P90P	Score=508;Name=lod=155	NA	6q25.3	NA	NA	NA	NA	rs34960420	0.12	0.12	0.111	0.127396	0.1044	0.1121	0.2291	0.1059	0.1237	0.09	0.11	0.19	0.09	0.1373	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.272057	1.272057	NA	0.112558	0.1069	NA	0.109	NA	6.3124086
1021	1	227216662	227216662	T	C	exonic	CDC42BPA	NA	synonymous SNV	CDC42BPA:NM_014826:exon28:c.A3780G:p.K1260K,CDC42BPA:NM_003607:exon29:c.A4023G:p.K1341K	exonic	ENSG00000143776	NA	synonymous SNV	ENSG00000143776:ENST00000366764:exon28:c.A3939G:p.K1313K,ENSG00000143776:ENST00000366767:exon28:c.A3780G:p.K1260K,ENSG00000143776:ENST00000334218:exon29:c.A4023G:p.K1341K,ENSG00000143776:ENST00000366769:exon29:c.A4023G:p.K1341K,ENSG00000143776:ENST00000535525:exon29:c.A3963G:p.K1321K,ENSG00000143776:ENST00000366765:exon30:c.A4062G:p.K1354K,ENSG00000143776:ENST00000366766:exon30:c.A4128G:p.K1376K	Score=589;Name=lod=329	NA	1q42.13	NA	NA	NA	NA	rs1929861	0.46	0.46	0.445	0.404353	0.4652	0.4038	0.4179	0.4796	0.2311	0.47	0.43	0.41	0.5	0.4318	0.61	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.906	T	0.000	T	.	0.668	7.579	1.38	-0.114	0.685	11.203	0.668292	NA	NA	0.457326	0.46709	NA	0.507	NA	6.3123406
1021	6	49931783	49931783	A	G	exonic	DEFB114	NA	synonymous SNV	DEFB114:NM_001037499:exon1:c.T36C:p.Y12Y	exonic	ENSG00000177684	NA	synonymous SNV	ENSG00000177684:ENST00000322066:exon1:c.T36C:p.Y12Y	Score=343;Name=lod=33	NA	6p12.3	NA	NA	NA	NA	rs73737276	0.08	0.08	0.059	0.0664936	0.1282	0.0079	0.0692	0.0522	0.0808	0.13	0.01	0.09	0.06	0.0977	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.377376	NA	NA	0.128435	0.066303	NA	0.029	NA	6.3123316
1021	7	43830888	43830888	T	C	exonic	BLVRA	NA	synonymous SNV	BLVRA:NM_000712:exon4:c.T175C:p.L59L,BLVRA:NM_001253823:exon5:c.T175C:p.L59L	exonic	ENSG00000106605	NA	synonymous SNV	ENSG00000106605:ENST00000265523:exon4:c.T175C:p.L59L,ENSG00000106605:ENST00000424330:exon4:c.T175C:p.L59L,ENSG00000106605:ENST00000402924:exon5:c.T175C:p.L59L	Score=474;Name=lod=113	NA	7p13	NA	NA	NA	NA	rs1802846	0.12	0.12	0.105	0.105831	0.1213	0.0804	0.1671	0.1127	0.0634	0.12	0.1	0.15	0.13	0.1225	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.167787	NA	NA	0.110814	0.10463	ID=COSM150274;OCCURENCE=1(stomach)	0.072	NA	6.3120526
1021	15	80872608	80872608	T	C	intronic	ARNT2	NA	NA	NA	ncRNA_exonic	ENSG00000270919	NA	NA	NA	NA	NA	15q25.1	NA	Name=BAF155,AP-2gamma,STAT3,c-Jun,AP-2alpha,JunD	Name=98	NA	rs4778826	0.12	0.12	0.133	0.140375	0.0219	0.1141	0.0288	0.3321	0.1094	0.02	0.15	0.04	0.31	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.205052	NA	NA	NA	NA	NA	0.13	NA	6.3114333
1021	14	39871017	39871017	T	C	exonic	FBXO33	NA	synonymous SNV	FBXO33:NM_203301:exon3:c.A759G:p.K253K	exonic	ENSG00000165355	NA	synonymous SNV	ENSG00000165355:ENST00000298097:exon3:c.A759G:p.K253K	Score=674;Name=lod=728	NA	14q21.1	NA	NA	NA	NA	rs7156962	0.16	0.16	0.16	0.176717	0.1213	0.0724	0.0879	0.3457	0.1759	0.13	0.08	0.08	0.36	0.1315	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.485539	NA	NA	0.102791	0.333636	NA	0.203	NA	6.3110756
1021	16	28603012	28603012	A	G	exonic	CCDC101	NA	synonymous SNV	CCDC101:NM_138414:exon10:c.A867G:p.E289E	exonic	ENSG00000176476	NA	synonymous SNV	ENSG00000176476:ENST00000317058:exon10:c.A867G:p.E289E	Score=637;Name=lod=517	NA	16p11.2	NA	NA	NA	NA	rs3194168	0.08	0.08	0.073	0.077476	0.1233	0.004	0.1037	0.0794	0.0849	0.11	0.01	0.12	0.1	0.0999	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.931389	NA	NA	0.132558	0.084433	NA	0.072	NA	6.3109086
1021	19	580388	580388	C	G	exonic	BSG	NA	synonymous SNV	BSG:NM_198591:exon2:c.C42G:p.S14S,BSG:NM_198589:exon3:c.C234G:p.S78S,BSG:NM_001728:exon4:c.C582G:p.S194S	exonic	ENSG00000172270	NA	synonymous SNV	ENSG00000172270:ENST00000346916:exon2:c.C42G:p.S14S,ENSG00000172270:ENST00000353555:exon3:c.C234G:p.S78S,ENSG00000172270:ENST00000573216:exon3:c.C210G:p.S70S,ENSG00000172270:ENST00000333511:exon4:c.C582G:p.S194S	NA	NA	19p13.3	NA	Name=ZNF263	NA	NA	rs2229664	0.15	0.15	0.131	0.190096	0.1113	0.2341	0.0908	0.2103	0.2689	0.11	0.2	0.11	0.19	0.144	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.094203	NA	NA	0.101024	0.169545	NA	0.109	NA	6.3103426
1021	22	17589246	17589246	G	A	exonic	IL17RA	NA	synonymous SNV	IL17RA:NM_014339:exon13:c.G1137A:p.K379K	exonic	ENSG00000177663	NA	synonymous SNV	ENSG00000177663:ENST00000319363:exon13:c.G1137A:p.K379K	Score=433;Name=lod=77	NA	22q11.1	NA	NA	NA	NA	rs879576	0.11	0.11	0.111	0.121406	0.1173	NA	0.0893	0.2466	0.1043	0.11	NA	0.1	0.24	0.1153	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.08754	NA	NA	0.123837	0.226736	NA	0.145	NA	6.3102296
1021	16	70515355	70515355	C	T	exonic	COG4	NA	synonymous SNV	COG4:NM_001195139:exon17:c.G2079A:p.S693S,COG4:NM_015386:exon18:c.G2142A:p.S714S	exonic	ENSG00000103051	NA	synonymous SNV	ENSG00000103051:ENST00000565715:exon3:c.G204A:p.S68S,ENSG00000103051:ENST00000323786:exon18:c.G2142A:p.S714S	Score=597;Name=lod=357	NA	16q22.1	NA	NA	NA	NA	rs11054	0.4	0.4	0.43	0.373802	0.4692	0.2222	0.3847	0.5083	0.2423	0.47	0.24	0.39	0.51	0.4207	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.36782	1.36782	NA	0.466977	0.517516	NA	0.355	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116788.2;CLNDSDB=.;CLNDSDBID=.	6.3097896
1021	16	69202908	69202908	A	G	UTR3	CIRH1A	NM_032830:c.*68A>G	NA	NA	UTR3	ENSG00000141076	ENST00000314423:c.*68A>G,ENST00000562237:c.*68A>G,ENST00000352319:c.*68A>G,ENST00000567500:c.*68A>G	NA	NA	Score=454;Name=lod=93	NA	16q22.1	NA	NA	Name=8	NA	rs74886619	0.01	0.01	0.005	0.00778754	0.0249	NA	0.0101	0.0008	0.0061	0.02	NA	0.01	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.57775	4.57775	NA	NA	NA	NA	0.007	NA	6.3084334
1021	6	138027662	138027662	A	G	intergenic	OLIG3,LOC100130476	dist=212131;dist=117145	NA	NA	ncRNA_exonic	ENSG00000220412	NA	NA	NA	Score=787;Name=lod=2101	NA	6q23.3	NA	Name=NFKB	Name=6	NA	rs6901613	0.65	0.65	0.623	0.652955	0.6918	0.5486	0.719	0.6649	0.6575	0.69	0.54	0.73	0.66	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.234546	NA	NA	NA	NA	NA	0.71	NA	6.3082
1021	6	155486519	155486519	G	A	exonic	TIAM2	NA	synonymous SNV	TIAM2:NM_012454:exon8:c.G2337A:p.K779K	exonic	ENSG00000146426	NA	synonymous SNV	ENSG00000146426:ENST00000456877:exon3:c.G273A:p.K91K,ENSG00000146426:ENST00000528391:exon3:c.G273A:p.K91K,ENSG00000146426:ENST00000360366:exon6:c.G2337A:p.K779K,ENSG00000146426:ENST00000529824:exon6:c.G2337A:p.K779K,ENSG00000146426:ENST00000318981:exon8:c.G2337A:p.K779K,ENSG00000146426:ENST00000367174:exon8:c.G393A:p.K131K,ENSG00000146426:ENST00000456144:exon8:c.G2337A:p.K779K,ENSG00000146426:ENST00000528535:exon9:c.G2337A:p.K779K,ENSG00000146426:ENST00000461783:exon11:c.G2337A:p.K779K	Score=448;Name=lod=88	NA	6q25.2	NA	NA	NA	NA	rs41284214	0.08	0.08	0.067	0.0563099	0.1312	0.001	0.0951	0.0499	0.0174	0.13	0.0017	0.1	0.07	0.0956	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.276559	1.276559	NA	0.131744	0.063777	NA	0.065	NA	6.3081226
1021	17	7460743	7460743	G	A	UTR3	TNFSF12	NM_003809:c.*76G>A	NA	NA	UTR3	ENSG00000239697	ENST00000293825:c.*76G>A,ENST00000322272:c.*660G>A	NA	NA	NA	NA	17p13.1	NA	Name=USF-1	Name=5	NA	rs113147008	0.02	0.02	0.017	0.0229633	0.0258	0.001	0.1153	0.0008	0.0072	0.03	NA	0.07	NA	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.734998	NA	NA	NA	NA	NA	0.007	NA	6.3075334
1021	13	43148565	43148565	T	C	exonic	TNFSF11	NA	synonymous SNV	TNFSF11:NM_003701:exon1:c.T126C:p.P42P	exonic	ENSG00000120659	NA	synonymous SNV	ENSG00000120659:ENST00000239849:exon1:c.T126C:p.P42P	Score=563;Name=lod=259	NA	13q14.11	Score=892;Name=V$AP2_Q6	NA	NA	NA	rs2296533	0.47	0.47	0.385	0.465455	0.4712	0.4444	0.4164	0.559	0.3896	0.47	0.42	0.41	0.55	0.5236	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.039638	NA	NA	0.364502	0.429606	NA	0.399	NA	6.3073646
1022	14	22038162	22038162	A	C	exonic	OR10G3	NA	synonymous SNV	OR10G3:NM_001005465:exon1:c.T714G:p.A238A	exonic	ENSG00000169208	NA	synonymous SNV	ENSG00000169208:ENST00000303532:exon1:c.T714G:p.A238A	Score=448;Name=lod=88	NA	14q11.2	NA	NA	NA	NA	rs17197261	0.09	0.09	0.06	0.0838658	0.1153	0.0407	0.2882	0.0091	0.0521	0.11	0.02	0.23	0.02	0.1176	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.088855	NA	NA	0.129419	0.028143	NA	0.167	NA	6.3043476
1022	10	73569749	73569749	C	T	exonic	CDH23	NA	synonymous SNV	CDH23:NM_001171933:exon14:c.C2175T:p.P725P,CDH23:NM_001171934:exon14:c.C2175T:p.P725P,CDH23:NM_022124:exon59:c.C8895T:p.P2965P	exonic	ENSG00000107736	NA	synonymous SNV	ENSG00000107736:ENST00000398788:exon14:c.C2175T:p.P725P,ENSG00000107736:ENST00000224721:exon60:c.C8910T:p.P2970P	NA	NA	10q22.1	NA	NA	NA	NA	rs11000009	0.08	0.08	0.082	0.0808706	0.1213	0.0079	0.072	0.09	0.1084	0.12	0.0035	0.07	0.09	0.1141	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.769117	NA	NA	0.127432	0.093248	NA	0.152	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000039294.1;CLNDSDB=.;CLNDSDBID=.	6.3038346
1022	10	82331292	82331292	G	A	exonic	SH2D4B	NA	synonymous SNV	SH2D4B:NM_001145719:exon3:c.G306A:p.K102K,SH2D4B:NM_207372:exon3:c.G453A:p.K151K	exonic	ENSG00000178217	NA	synonymous SNV	ENSG00000178217:ENST00000313455:exon3:c.G306A:p.K102K,ENSG00000178217:ENST00000339284:exon3:c.G453A:p.K151K,ENSG00000178217:ENST00000470604:exon3:c.G450A:p.K150K	Score=507;Name=lod=154	NA	10q23.1	NA	NA	NA	NA	rs72805712	0.1	0.1	0.089	0.0938498	0.1203	0.004	0.0879	0.1785	0.0491	0.12	0.0017	0.11	0.15	0.1093	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.294934	1.294934	NA	0.133256	0.169768	NA	0.116	NA	6.3038106
1022	19	51920852	51920852	C	T	UTR5	SIGLEC10	NM_001171161:c.-17G>A,NM_001171158:c.-17G>A,NM_001171159:c.-17G>A,NM_001171157:c.-17G>A,NM_001171156:c.-17G>A,NM_033130:c.-17G>A	NA	NA	UTR5	ENSG00000142512	ENST00000353836:c.-17G>A,ENST00000441969:c.-17G>A,ENST00000356298:c.-17G>A,ENST00000432469:c.-17G>A,ENST00000525998:c.-17G>A,ENST00000439889:c.-17G>A,ENST00000436984:c.-17G>A,ENST00000339313:c.-17G>A,ENST00000529627:c.-17G>A	NA	NA	NA	NA	19q13.41	NA	Name=Oct-2,ELF1_(SC-631),POU2F2,TAF1,PU.1,Pol2,Pol2-4H8	Name=17	NA	rs117354113	0.0032	0.0032	0.01	0.00459265	0.0099	NA	0.0115	0.0008	0.0041	0.01	NA	0.01	0.002	0.0088	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.822603	NA	NA	0.011049	0.002724	NA	NA	NA	6.3035844
1022	21	43161877	43161877	C	T	exonic	RIPK4	NA	synonymous SNV	RIPK4:NM_020639:exon8:c.G1476A:p.A492A	exonic	ENSG00000183421	NA	synonymous SNV	ENSG00000183421:ENST00000332512:exon8:c.G1476A:p.A492A,ENSG00000183421:ENST00000542057:exon8:c.G1287A:p.A429A,ENSG00000183421:ENST00000544709:exon8:c.G1287A:p.A429A,ENSG00000183421:ENST00000352483:exon9:c.G1620A:p.A540A	Score=499;Name=lod=142	NA	21q22.3	Score=905;Name=V$NRF2_01	NA	NA	NA	rs3746893	0.47	0.47	0.432	0.440096	0.4811	0.5704	0.4654	0.2806	0.4611	0.48	0.59	0.49	0.28	0.4434	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.613908	NA	NA	0.438605	0.321153	NA	0.254	NA	6.3035616
1022	3	101295777	101295777	G	C	intronic	PCNP	NA	NA	NA	ncRNA_exonic	ENSG00000242299	NA	NA	NA	Score=576;Name=lod=293	NA	3q12.3	NA	Name=HEY1	NA	NA	rs116074383	0.01	0.01	0.006	0.0081869	0.0298	NA	0.0101	0.0008	0.0031	0.02	NA	0.01	NA	NA	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.012669	2.012669	NA	NA	NA	NA	0.022	NA	6.3035333
1022	8	119938782	119938782	T	C	exonic	TNFRSF11B	NA	synonymous SNV	TNFRSF11B:NM_002546:exon4:c.A768G:p.L256L	exonic	ENSG00000164761	NA	synonymous SNV	ENSG00000164761:ENST00000297350:exon4:c.A768G:p.L256L	Score=599;Name=lod=363	NA	8q24.12	NA	NA	NA	NA	rs2228568	0.07	0.07	0.07	0.0786741	0.1223	0.0069	0.0663	0.0461	0.1605	0.13	0.0017	0.08	0.05	0.1086	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.236805	1.236805	NA	0.132473	0.057195	NA	0.116	NA	6.3032936
1022	6	29910324	29910324	G	C	UTR5	HLA-A	NM_001242758:c.-7G>C,NM_002116:c.-7G>C	NA	NA	ncRNA_exonic	ENSG00000227766	NA	NA	NA	NA	NA	6p22.1	NA	Name=HEY1,Oct-2,HNF4G_(SC-6558),GTF2F1_(RAP-74),TBP,TAF1,USF2,HNF4A_(H-171),POU2F2,YY1,Pol2(phosphoS2),Pol2,SP1,RFX5_(N-494),Pol2-4H8,Sin3Ak-20,YY1_(C-20),TAF7_(SQ-8)	Name=144	NA	rs114945359	0.08	0.08	0.044	0.101837	0.0596	0.2629	0.0403	0.0008	0.1595	0.06	0.22	0.04	0.002	0.0786	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.277154	NA	NA	0.058913	0.012273	NA	0.094	NA	6.302887
1022	1	51767352	51767352	G	A	exonic	TTC39A	NA	synonymous SNV	TTC39A:NM_001080494:exon12:c.C948T:p.F316F,TTC39A:NM_001144832:exon12:c.C957T:p.F319F	exonic	ENSG00000085831	NA	synonymous SNV	ENSG00000085831:ENST00000262675:exon12:c.C864T:p.F288F,ENSG00000085831:ENST00000371747:exon12:c.C1050T:p.F350F,ENSG00000085831:ENST00000371750:exon12:c.C948T:p.F316F,ENSG00000085831:ENST00000413473:exon12:c.C957T:p.F319F,ENSG00000085831:ENST00000447632:exon12:c.C1053T:p.F351F,ENSG00000085831:ENST00000451380:exon12:c.C945T:p.F315F	Score=715;Name=lod=1074	NA	1p32.3	NA	NA	NA	NA	rs41287290	0.07	0.07	0.058	0.0533147	0.1441	NA	0.0836	0.0106	0.0511	0.13	NA	0.1	0.02	0.0958	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.227331	NA	NA	0.123964	0.02325	ID=COSM1343277,COSM1343278;OCCURENCE=1(large_intestine)	0.007	NA	6.3028026
1022	19	50909765	50909765	C	T	exonic	POLD1	NA	synonymous SNV	POLD1:NM_001256849:exon12:c.C1485T:p.T495T,POLD1:NM_002691:exon12:c.C1485T:p.T495T	exonic	ENSG00000062822	NA	synonymous SNV	ENSG00000062822:ENST00000595904:exon11:c.C1485T:p.T495T,ENSG00000062822:ENST00000440232:exon12:c.C1485T:p.T495T,ENSG00000062822:ENST00000599857:exon12:c.C1485T:p.T495T,ENSG00000062822:ENST00000600859:exon12:c.C1485T:p.T495T	NA	Name=Obesity-related traits	19q13.33	NA	NA	NA	NA	rs2230245	0.06	0.06	0.059	0.077476	0.1252	0.0099	0.0749	0.0318	0.1616	0.11	0.0035	0.08	0.04	0.124	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.089444	NA	NA	0.114731	0.039109	ID=COSM1395459,COSM1395458;OCCURENCE=1(large_intestine)	0.043	NA	6.3027356
1022	20	57564070	57564070	C	T	exonic	NELFCD	NA	synonymous SNV	NELFCD:NM_198976:exon5:c.C552T:p.T184T	exonic	ENSG00000101158	NA	synonymous SNV	ENSG00000101158:ENST00000344018:exon5:c.C525T:p.T175T,ENSG00000101158:ENST00000602795:exon5:c.C552T:p.T184T	Score=470;Name=lod=108	NA	20q13.32	NA	NA	NA	NA	rs2273360	0.1	0.1	0.092	0.109026	0.1183	0.1359	0.17	0.0204	0.1483	0.12	0.12	0.16	0.02	0.1298	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.205465	NA	NA	0.116163	0.041761	NA	0.08	NA	6.3024036
1022	5	70800475	70800475	C	T	exonic	BDP1	NA	nonsynonymous SNV	BDP1:NM_018429:exon16:c.C2269T:p.R757C	exonic	ENSG00000145734	NA	nonsynonymous SNV	ENSG00000145734:ENST00000358731:exon16:c.C2269T:p.R757C	NA	NA	5q13.2	NA	NA	NA	NA	rs3761966	0.34	0.34	0.326	0.323682	0.335	0.505	0.4928	0.1067	0.2986	0.33	0.51	0.44	0.1	0.3539	0.51	0.21	T	0.0	B	0.0	B	0.622	N	1.000	P	-1.06	N	2.98	T	-0.969	T	0.000	T	0.058	-0.878	0.484	-0.211	-0.150	-0.258	3.227	-0.878384	NA	0.18	0.343612	0.148884	NA	0.29	NA	6.3008214
1022	8	25315837	25315837	G	A	UTR5	KCTD9	NM_017634:c.-75C>T	NA	NA	UTR5	ENSG00000104756	ENST00000221200:c.-75C>T,ENST00000519665:c.-75C>T,ENST00000523140:c.-75C>T	NA	NA	Score=589;Name=lod=330	NA	8p21.2	NA	Name=GR,EBF1_(C-8),GABP,TAF1,YY1_(C-20),Pol2,PAX5-C20,NFKB,AP-2gamma,c-Myc,ZBTB7A_(SC-34508),TBP,TCF12,EBF,Pol2-4H8,Sin3Ak-20,Egr-1	NA	NA	rs62502022	0.02	0.02	0.015	0.0127796	0.0328	NA	0.0331	0.0008	0.0072	0.03	NA	0.02	0.01	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.775024	1.775024	NA	NA	NA	NA	NA	NA	6.3005334
1022	5	135382989	135382989	G	C	exonic	TGFBI	NA	synonymous SNV	TGFBI:NM_000358:exon6:c.G651C:p.L217L	exonic	ENSG00000120708	NA	synonymous SNV	ENSG00000120708:ENST00000305126:exon6:c.G651C:p.L217L,ENSG00000120708:ENST00000442011:exon6:c.G651C:p.L217L	Score=423;Name=lod=70	NA	5q31.1	Score=785;Name=V$PPARA_01	NA	NA	NA	rs1442	0.35	0.35	0.307	0.317692	0.4732	0.369	0.4481	0.0272	0.4049	0.49	0.37	0.43	0.04	0.427	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.190248	NA	NA	0.465947	0.094894	NA	0.297	NA	6.3005196
1022	2	32800422	32800422	C	G	exonic	BIRC6	NA	synonymous SNV	BIRC6:NM_016252:exon66:c.C13344G:p.T4448T	exonic	ENSG00000115760	NA	synonymous SNV	ENSG00000115760:ENST00000421745:exon66:c.C13344G:p.T4448T	Score=666;Name=lod=677	NA	2p22.3	NA	NA	NA	NA	rs35286811	0.1	0.1	0.091	0.0940495	0.1332	0.0456	0.0922	0.115	0.0767	0.12	0.06	0.11	0.1	0.112	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.779404	NA	NA	0.121279	0.124149	NA	0.159	NA	6.3001876
1022	12	31604928	31604928	G	C	exonic	DENND5B	NA	synonymous SNV	DENND5B:NM_144973:exon5:c.C1575G:p.A525A	exonic	ENSG00000170456	NA	synonymous SNV	ENSG00000170456:ENST00000546299:exon4:c.C1431G:p.A477A,ENSG00000170456:ENST00000389082:exon5:c.C1575G:p.A525A,ENSG00000170456:ENST00000306833:exon6:c.C1680G:p.A560A,ENSG00000170456:ENST00000354285:exon6:c.C1641G:p.A547A,ENSG00000170456:ENST00000536562:exon7:c.C1680G:p.A560A	Score=598;Name=lod=358	NA	12p11.21	NA	NA	NA	NA	rs3205175	0.18	0.18	0.185	0.176318	0.1233	0.247	0.1052	0.2247	0.1431	0.12	0.24	0.12	0.24	0.1383	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.515171	NA	NA	0.105352	0.2	NA	0.181	NA	6.2997146
1022	4	15850330	15850330	T	G	UTR3	CD38	NM_001775:c.*105T>G	NA	NA	UTR3	ENSG00000004468	ENST00000502843:c.*503T>G,ENST00000226279:c.*105T>G	NA	NA	NA	NA	4p15.32	NA	Name=MafK_(ab50322),eGFP-JunD	Name=15	NA	rs1803404	0.04	0.04	0.039	0.0457268	0.0338	NA	0.0389	0.1165	0.0143	0.03	NA	0.04	0.12	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.868469	NA	NA	NA	NA	NA	0.036	NA	6.2995334
1022	3	97983942	97983942	A	G	exonic	OR5H6	NA	nonsynonymous SNV	OR5H6:NM_001005479:exon1:c.A814G:p.T272A	exonic	ENSG00000230301	NA	nonsynonymous SNV	ENSG00000230301:ENST00000383696:exon1:c.A814G:p.T272A	NA	NA	3q11.2	NA	NA	NA	NA	rs9853906	0.68	0.68	0.716	0.663339	0.6899	0.621	0.6167	0.7186	0.638	0.69	0.68	0.59	0.76	0.6657	0.76	0.3	T	0.0	B	0.0	B	0.882	N	1.000	P	0.19	N	1.24	T	-0.991	T	0.000	T	0.011	0.719	7.826	-0.036	-0.639	-5.389	6.289	0.71872	NA	0.07	0.67853	0.714026	NA	0.659	NA	6.2992034
1022	6	30036471	30036471	C	A	exonic	PPP1R11	NA	synonymous SNV	PPP1R11:NM_021959:exon2:c.C174A:p.S58S	exonic	ENSG00000204619	NA	synonymous SNV	ENSG00000204619:ENST00000376758:exon1:c.C18A:p.S6S,ENSG00000204619:ENST00000376772:exon2:c.C174A:p.S58S,ENSG00000204619:ENST00000376773:exon2:c.C18A:p.S6S,ENSG00000204619:ENST00000376763:exon3:c.C18A:p.S6S,ENSG00000204619:ENST00000376765:exon3:c.C18A:p.S6S,ENSG00000204619:ENST00000376769:exon3:c.C18A:p.S6S	Score=468;Name=lod=106	NA	6p22.1	NA	NA	NA	NA	rs2074482	0.18	0.18	0.191	0.191294	0.0954	0.1905	0.1744	0.2988	0.1575	0.09	0.2	0.2	0.3	0.1522	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.914056	NA	NA	0.11997	0.25546	NA	0.167	NA	6.2990966
1022	14	33292914	33292914	A	C	exonic	AKAP6	NA	synonymous SNV	AKAP6:NM_004274:exon13:c.A5895C:p.P1965P	exonic	ENSG00000151320	NA	synonymous SNV	ENSG00000151320:ENST00000280979:exon13:c.A5895C:p.P1965P	Score=405;Name=lod=59	NA	14q12	NA	NA	NA	NA	rs2239648	0.24	0.24	0.259	0.266174	0.1113	0.251	0.1499	0.4864	0.226	0.11	0.28	0.11	0.49	0.1534	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.320256	NA	NA	0.103837	0.422379	NA	0.261	NA	6.2981296
1022	5	35871190	35871190	G	A	exonic	IL7R	NA	nonsynonymous SNV	IL7R:NM_002185:exon4:c.G412A:p.V138I	exonic	ENSG00000168685	NA	nonsynonymous SNV	ENSG00000168685:ENST00000303115:exon4:c.G412A:p.V138I,ENSG00000168685:ENST00000343305:exon4:c.G412A:p.V138I,ENSG00000168685:ENST00000506850:exon4:c.G412A:p.V138I,ENSG00000168685:ENST00000514217:exon4:c.G412A:p.V138I	NA	NA	5p13.2	NA	NA	NA	NA	rs1494555	0.67	0.67	0.707	0.666933	0.7038	0.4812	0.562	0.9312	0.5378	0.71	0.48	0.59	0.9	0.6519	0.9	0.38	T	0.0	B	0.0	B	0.488	N	1.000	P	.	.	-1.12	T	-0.974	T	0.000	T	0.059	-1.66	0.012	-1.61	-0.900	-0.031	11.700	-1.65972	NA	0.84	0.680116	0.874035	ID=COSM149814;OCCURENCE=1(stomach)	0.746	CLINSIG=pathogenic|untested;CLNDBN=Severe_combined_immunodeficiency\x2c_autosomal_recessive\x2c_T_cell-negative\x2c_B_cell-positive\x2c_NK_cell-positive|not_specified;CLNREVSTAT=single|not;CLNACC=RCV000015965.24|RCV000121214.1;CLNDSDB=MedGen:OMIM|.;CLNDSDBID=C1837028:608971|.	6.2975174
1022	11	4790575	4790575	A	G	exonic	OR51F1	NA	synonymous SNV	OR51F1:NM_001004752:exon1:c.T573C:p.C191C	exonic	ENSG00000188069	NA	synonymous SNV	ENSG00000188069:ENST00000343430:exon1:c.T573C:p.C191C,ENSG00000188069:ENST00000380383:exon1:c.T594C:p.C198C	Score=352;Name=lod=36	NA	11p15.4	NA	NA	NA	NA	rs12788102	0.08	0.08	0.066	0.0485224	0.1412	NA	0.0965	0.0151	0.0143	0.14	NA	0.13	0.02	0.0934	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.162313	NA	NA	0.13483	0.048614	NA	0.13	NA	6.2972366
1022	6	32627882	32627882	C	T	UTR3	HLA-DQB1	NM_002123:c.*131G>A,NM_001243961:c.*131G>A	NA	NA	ncRNA_UTR3	ENSG00000179344	NA	NA	NA	NA	NA	6p21.32	NA	Name=Pol2,ELF1_(SC-631),TBP	Name=7	NA	rs1071639	0.21	0.21	0.19	0.218251	0.2028	0.252	0.1643	0.2284	0.2239	0.23	0.16	0.2	0.26	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.105039	NA	NA	NA	NA	NA	0.275	NA	6.2972
1022	17	40706679	40706679	C	T	intronic	HSD17B1	NA	NA	NA	ncRNA_exonic	ENSG00000266962	NA	NA	NA	NA	NA	17q21.2	NA	Name=NRSF,Pol2,Pol2(phosphoS2),TAF1,ELF1_(SC-631),HA-E2F1,Pol2-4H8,Egr-1,TBP,PAX5-N19,ZBTB7A_(SC-34508),HEY1	Name=137	NA	rs113690224	0.01	0.01	0.015	0.00559105	0.0159	NA	0.0115	0.0023	0.001	0.01	NA	0.01	0.0041	0.0078	0.013	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.628884	NA	NA	0.012591	0.002297	NA	0.007	NA	6.2970423
1022	2	43805739	43805739	C	T	exonic	THADA	NA	synonymous SNV	THADA:NM_001083953:exon9:c.G729A:p.L243L,THADA:NM_001271643:exon9:c.G729A:p.L243L,THADA:NM_001271644:exon9:c.G729A:p.L243L,THADA:NM_022065:exon9:c.G729A:p.L243L	exonic	ENSG00000115970	NA	synonymous SNV	ENSG00000115970:ENST00000402360:exon8:c.G729A:p.L243L,ENSG00000115970:ENST00000474159:exon8:c.G729A:p.L243L,ENSG00000115970:ENST00000398653:exon9:c.G729A:p.L243L,ENSG00000115970:ENST00000404790:exon9:c.G729A:p.L243L,ENSG00000115970:ENST00000405006:exon9:c.G729A:p.L243L,ENSG00000115970:ENST00000405975:exon9:c.G729A:p.L243L,ENSG00000115970:ENST00000408045:exon9:c.G729A:p.L243L,ENSG00000115970:ENST00000403856:exon10:c.G729A:p.L243L	Score=544;Name=lod=217	NA	2p21	NA	NA	NA	NA	rs61754256	0.13	0.13	0.147	0.157748	0.1064	0.0069	0.0922	0.3487	0.1544	0.11	0.01	0.11	0.33	0.1285	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.508387	NA	NA	0.135452	0.293122	NA	0.123	NA	6.2963146
1022	8	104343686	104343686	G	A	exonic	FZD6	NA	synonymous SNV	FZD6:NM_001164615:exon7:c.G2070A:p.P690P,FZD6:NM_003506:exon7:c.G2070A:p.P690P,FZD6:NM_001164616:exon8:c.G1974A:p.P658P	exonic	ENSG00000164930	NA	synonymous SNV	ENSG00000164930:ENST00000540287:exon6:c.G1155A:p.P385P,ENSG00000164930:ENST00000358755:exon7:c.G2070A:p.P690P,ENSG00000164930:ENST00000522566:exon7:c.G2070A:p.P690P,ENSG00000164930:ENST00000523739:exon8:c.G1974A:p.P658P	NA	NA	8q22.3	Score=810;Name=V$FREAC3_01	NA	Name=2	NA	rs1053917	0.45	0.45	0.444	0.437899	0.4493	0.627	0.5043	0.2829	0.3937	0.45	0.6	0.48	0.25	0.457	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.806891	NA	NA	0.464186	0.29301	NA	0.464	NA	6.2961806
1022	1	43855546	43855546	A	G	upstream	MED8,SZT2	NA	NA	NA	upstream;downstream	ENSG00000159479,ENSG00000198198;ENSG00000229431	NA	NA	NA	NA	NA	1p34.2	Score=957;Name=V$CETS1P54_01	Name=NF-YB,MafK_(ab50322),CCNT2,ELF1_(SC-631),NFKB,TBP,GTF2F1_(RAP-74),IRF1,RXRA,CEBPB,CHD2_(N-1250),ELK4,MafF_(M8194),GABP,Pol2(b),TAF1,GATA-1,NF-YA,MafK_(SC-477),SP2_(SC-643),Sin3Ak-20,YY1_(C-20),Pbx3,KAP1,TR4,c-Fos,Pol2-4H8,Pol2,SP1,Mxi1_(bHLH),PU.1,STAT3,Pol2(phosphoS2),Egr-1	Name=148	NA	rs839752	0.28	0.28	0.243	0.228035	0.3708	0.1062	0.3746	0.236	0.092	0.38	0.11	0.39	0.25	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.441073	1.441073	NA	NA	NA	NA	0.355	NA	6.2958666
1022	11	117309989	117309989	C	T	exonic	DSCAML1	NA	synonymous SNV	DSCAML1:NM_020693:exon23:c.G4317A:p.L1439L	exonic	ENSG00000177103	NA	synonymous SNV	ENSG00000177103:ENST00000527706:exon21:c.G3507A:p.L1169L,ENSG00000177103:ENST00000321322:exon23:c.G4317A:p.L1439L	Score=554;Name=lod=237	NA	11q23.3	NA	NA	NA	NA	rs11216386	0.26	0.26	0.229	0.252196	0.1064	0.5565	0.1758	0.1997	0.2137	0.11	0.56	0.17	0.2	0.1676	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.006347	NA	NA	0.0973	0.187188	NA	0.232	NA	6.2953666
1022	11	118925341	118925341	G	A	exonic	HYOU1	NA	synonymous SNV	HYOU1:NM_001130991:exon7:c.C543T:p.N181N,HYOU1:NM_006389:exon7:c.C543T:p.N181N	exonic	ENSG00000149428	NA	synonymous SNV	ENSG00000149428:ENST00000543287:exon6:c.C282T:p.N94N,ENSG00000149428:ENST00000404233:exon7:c.C543T:p.N181N,ENSG00000149428:ENST00000526656:exon7:c.C543T:p.N181N,ENSG00000149428:ENST00000529972:exon7:c.C543T:p.N181N,ENSG00000149428:ENST00000530473:exon7:c.C543T:p.N181N,ENSG00000149428:ENST00000534233:exon7:c.C543T:p.N181N,ENSG00000149428:ENST00000525859:exon8:c.C543T:p.N181N	Score=549;Name=lod=227	NA	11q23.3	NA	NA	NA	Score=60;Name=469108_0_-_60	rs538478	0.47	0.47	0.45	0.432308	0.4821	0.7192	0.2954	0.1868	0.5143	0.48	0.75	0.32	0.22	0.4452	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.144214	NA	NA	0.444121	0.233636	NA	0.42	NA	6.2952456
1023	16	231167	231167	C	T	UTR3	HBQ1	NM_005331:c.*60C>T	NA	NA	UTR3	ENSG00000086506	ENST00000199708:c.*60C>T	NA	NA	NA	NA	16p13.3	NA	Name=Pol2	Name=27	NA	rs3929997	0.03	0.03	0.03	0.034345	0.0388	NA	0.0346	0.0371	0.0613	0.04	NA	0.03	0.04	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.951446	NA	NA	NA	NA	NA	0.022	NA	6.2945334
1023	19	2834808	2834808	T	C	exonic	ZNF554	NA	synonymous SNV	ZNF554:NM_001102651:exon5:c.T1575C:p.C525C	exonic	ENSG00000172006	NA	synonymous SNV	ENSG00000172006:ENST00000317243:exon5:c.T1575C:p.C525C	Score=374;Name=lod=44	NA	19p13.3	NA	Name=KAP1,SETDB1,ZNF274	NA	NA	rs8102063	0.37	0.37	0.37	0.394169	0.4463	0.3413	0.3314	0.3306	0.5256	0.44	0.33	0.36	0.34	0.4455	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.887042	NA	NA	0.480339	0.32119	NA	0.362	NA	6.2945276
1023	13	114309226	114309226	G	A	exonic	ATP4B	NA	synonymous SNV	ATP4B:NM_000705:exon2:c.C144T:p.Y48Y	exonic	ENSG00000186009	NA	synonymous SNV	ENSG00000186009:ENST00000335288:exon2:c.C144T:p.Y48Y	Score=517;Name=lod=168	NA	13q34	NA	Name=MafK_(ab50322)	NA	NA	rs11164142	0.45	0.45	0.436	0.473243	0.4592	0.6032	0.4438	0.32	0.5818	0.46	0.61	0.44	0.27	0.476	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.949221	NA	NA	0.437558	0.298003	NA	0.319	NA	6.2939086
1023	6	29911319	29911319	G	T	exonic	HLA-A	NA	synonymous SNV	HLA-A:NM_001242758:exon3:c.G618T:p.T206T,HLA-A:NM_002116:exon3:c.G618T:p.T206T	exonic	ENSG00000206503	NA	synonymous SNV	ENSG00000206503:ENST00000376802:exon3:c.G618T:p.T206T,ENSG00000206503:ENST00000376806:exon3:c.G618T:p.T206T,ENSG00000206503:ENST00000376809:exon3:c.G618T:p.T206T,ENSG00000206503:ENST00000396634:exon5:c.G618T:p.T206T	Score=381;Name=lod=47	NA	6p22.1	NA	NA	NA	NA	rs41554520	NA	NA	0.336	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3731	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.448617	1.448617	NA	NA	NA	NA	NA	NA	6.2935666
1023	4	119200274	119200274	C	T	ncRNA_exonic	SNHG8	NA	NA	NA	ncRNA_exonic	ENSG00000269893	NA	NA	NA	NA	NA	4q26	NA	Name=Pol2(b),TAF1,ETS1,E2F6_(H-50),Pol2,Ini1,YY1,Egr-1,YY1_(C-20),Sin3Ak-20,Pol2-4H8,USF1_(SC-8983),HEY1,PAX5-C20,USF-1	Name=148	NA	rs658642	0.23	0.23	0.226	0.23143	0.3738	0.12	0.3588	0.0439	0.363	0.37	0.12	0.36	0.06	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.782764	NA	NA	NA	NA	NA	0.355	NA	6.2928666
1023	4	1161190	1161190	C	T	UTR3	SPON2	NM_001128325:c.*70G>A,NM_001199021:c.*70G>A,NM_012445:c.*70G>A	NA	NA	UTR3	ENSG00000159674	ENST00000290902:c.*70G>A,ENST00000431380:c.*70G>A	NA	NA	NA	NA	4p16.3	NA	Name=TBP,CEBPB,CTCF,USF-1,PAX5-C20,CTCF_(C-20),c-Myc,Max,ZBTB7A_(SC-34508),Rad21,YY1_(C-20),E2F6,ZNF263,CTCF_(SC-5916),SMC3_(ab9263),YY1,GABP,E2F6_(H-50),Znf143_(16618-1-AP)	Name=113	NA	rs17164382	0.05	0.05	0.042	0.048722	0.0408	0.1379	0.0303	0.0015	0.0419	0.05	0.12	0.03	0.0041	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.301629	NA	NA	NA	NA	NA	0.007	NA	6.2925334
1023	4	68441091	68441091	T	C	intronic	STAP1	NA	NA	NA	intronic	ENSG00000035720	NA	NA	NA	Score=431;Name=lod=75	NA	4q13.2	NA	Name=GTF2B,HEY1,ELF1_(SC-631),Pol2-4H8,KAP1,BCLAF1_(M33-P5B11),TAF7_(SQ-8),MEF2C_(SC-13268),Pol2	Name=19	NA	rs2306810	0.15	0.15	0.135	0.126398	0.2366	0.1032	0.1657	0.0189	0.1544	0.25	0.11	0.19	0.02	0.2071	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.166214	NA	NA	0.26407	0.064911	NA	0.087	NA	6.29223
1023	17	74554739	74554739	C	G	ncRNA_intronic	SNHG16	NA	NA	NA	ncRNA_exonic	ENSG00000163597	NA	NA	NA	NA	NA	17q25.1	NA	Name=Znf143_(16618-1-AP),CTCFL_(SC-98982),SMC3_(ab9263),Mxi1_(bHLH),Rad21,CTCF,CTCF_(SC-5916),CTCF_(C-20)	Name=89	NA	rs4648343	0.38	0.38	0.379	0.403554	0.3757	0.4851	0.2968	0.3661	0.4744	0.37	0.48	0.3	0.33	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.090713	NA	NA	NA	NA	NA	0.42	NA	6.2909666
1023	3	3886919	3886919	C	T	exonic	LRRN1	NA	synonymous SNV	LRRN1:NM_020873:exon2:c.C594T:p.I198I	exonic	ENSG00000175928	NA	synonymous SNV	ENSG00000175928:ENST00000319331:exon2:c.C594T:p.I198I	Score=577;Name=lod=295	NA	3p26.2	NA	NA	NA	NA	rs3749348	0.21	0.21	0.21	0.211661	0.1024	0.2619	0.1455	0.2943	0.2076	0.1	0.28	0.15	0.33	0.152	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.64704	NA	NA	0.122209	0.235134	NA	0.217	NA	6.2900576
1023	15	70346923	70346923	C	T	exonic	TLE3	NA	synonymous SNV	TLE3:NM_001105192:exon16:c.G1680A:p.S560S,TLE3:NM_005078:exon16:c.G1689A:p.S563S,TLE3:NM_020908:exon16:c.G1653A:p.S551S	exonic	ENSG00000140332	NA	synonymous SNV	ENSG00000140332:ENST00000559191:exon5:c.G432A:p.S144S,ENSG00000140332:ENST00000539550:exon14:c.G1470A:p.S490S,ENSG00000140332:ENST00000560589:exon14:c.G1521A:p.S507S,ENSG00000140332:ENST00000558201:exon15:c.G1707A:p.S569S,ENSG00000140332:ENST00000559048:exon15:c.G1689A:p.S563S,ENSG00000140332:ENST00000560939:exon15:c.G1695A:p.S565S,ENSG00000140332:ENST00000317509:exon16:c.G1653A:p.S551S,ENSG00000140332:ENST00000440567:exon16:c.G1659A:p.S553S,ENSG00000140332:ENST00000442299:exon16:c.G1665A:p.S555S,ENSG00000140332:ENST00000451782:exon16:c.G1680A:p.S560S,ENSG00000140332:ENST00000557907:exon16:c.G1665A:p.S555S,ENSG00000140332:ENST00000557997:exon16:c.G1665A:p.S555S,ENSG00000140332:ENST00000558379:exon16:c.G1674A:p.S558S,ENSG00000140332:ENST00000558939:exon16:c.G1689A:p.S563S,ENSG00000140332:ENST00000559929:exon16:c.G1719A:p.S573S	NA	NA	15q23	Score=908;Name=V$P300_01	NA	NA	Score=110;Name=826070_0_-_110	rs2228178	0.35	0.35	0.347	0.36262	0.4781	0.255	0.4726	0.2284	0.4581	0.46	0.25	0.46	0.21	0.4285	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.473304	1.473304	NA	0.470184	0.273619	NA	0.435	NA	6.2898826
1023	2	197541296	197541296	G	A	exonic	CCDC150	NA	synonymous SNV	CCDC150:NM_001080539:exon12:c.G1281A:p.E427E	exonic	ENSG00000144395	NA	synonymous SNV	ENSG00000144395:ENST00000423093:exon6:c.G285A:p.E95E,ENSG00000144395:ENST00000272831:exon8:c.G285A:p.E95E,ENSG00000144395:ENST00000389175:exon12:c.G1281A:p.E427E	Score=321;Name=lod=27	NA	2q33.1	NA	NA	NA	NA	rs17271281	0.08	0.08	0.077	0.0710863	0.1322	0.006	0.0879	0.0968	0.0286	0.13	0.0035	0.1	0.08	0.1109	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.541776	NA	NA	0.13409	0.093835	NA	0.072	NA	6.2894766
1023	21	46047857	46047857	C	T	exonic	KRTAP10-9	NA	nonsynonymous SNV	KRTAP10-9:NM_198690:exon1:c.C769T:p.R257C	exonic	ENSG00000221837	NA	nonsynonymous SNV	ENSG00000221837:ENST00000397911:exon1:c.C769T:p.R257C	Score=397;Name=lod=55	NA	21q22.3	NA	NA	NA	NA	rs9980129	0.63	0.63	0.593	0.626597	0.7068	0.6488	0.6744	0.5076	0.6483	0.7	0.62	0.68	0.51	0.6636	0.7	.	.	0.041	B	0.023	B	.	.	0.000	P	-2.465	N	6.06	T	-1.080	T	0.000	T	0.136	-1.322	0.033	1.24	0.229	0.165	3.993	-1.322386	NA	1	0.674121	0.526352	NA	0.536	NA	6.2888124
1023	1	6278414	6278414	A	G	exonic	RNF207	NA	nonsynonymous SNV	RNF207:NM_207396:exon17:c.A1718G:p.N573S	exonic	ENSG00000158286	NA	nonsynonymous SNV	ENSG00000158286:ENST00000377939:exon17:c.A1718G:p.N573S	NA	NA	1p36.31	NA	NA	NA	NA	rs709209	0.4	0.4	0.416	0.437101	0.3469	0.2639	0.2939	0.7405	0.3998	0.33	0.27	0.32	0.7	0.3617	0.7	0.88	T	0.0	B	0.0	B	0.168	N	1.000	P	-1.245	N	2.36	T	-0.951	T	0.000	T	0.02	-0.867	0.509	-1.29	-0.582	-0.296	1.127	-0.867304	NA	0.77	0.336039	0.680075	NA	0.507	NA	6.2886944
1023	17	61564052	61564052	A	G	exonic	ACE	NA	synonymous SNV	ACE:NM_001178057:exon3:c.A471G:p.A157A,ACE:NM_152830:exon3:c.A471G:p.A157A,ACE:NM_000789:exon14:c.A2193G:p.A731A	exonic	ENSG00000159640,ENSG00000264813	NA	synonymous SNV	ENSG00000159640:ENST00000290863:exon3:c.A471G:p.A157A,ENSG00000159640:ENST00000413513:exon3:c.A471G:p.A157A,ENSG00000159640:ENST00000421982:exon3:c.A123G:p.A41A,ENSG00000159640:ENST00000490216:exon3:c.A471G:p.A157A,ENSG00000264813:ENST00000577647:exon3:c.A471G:p.A157A,ENSG00000159640:ENST00000579314:exon3:c.A471G:p.A157A,ENSG00000159640:ENST00000290866:exon14:c.A2193G:p.A731A,ENSG00000159640:ENST00000428043:exon14:c.A2193G:p.A731A	Score=352;Name=lod=36	NA	17q23.3	Score=740;Name=V$MYOGNF1_01	NA	NA	NA	rs4331	0.48	0.48	0.457	0.529553	0.4235	0.6736	0.5692	0.413	0.6196	0.39	0.63	0.52	0.4	0.4999	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.239887	NA	NA	0.454651	0.421017	NA	0.522	NA	6.2886156
1023	7	97922851	97922851	C	T	exonic	BAIAP2L1	NA	synonymous SNV	BAIAP2L1:NM_018842:exon14:c.G1518A:p.S506S	exonic	ENSG00000006453	NA	synonymous SNV	ENSG00000006453:ENST00000005260:exon14:c.G1518A:p.S506S	Score=325;Name=lod=28	NA	7q21.3	Score=881;Name=V$CDPCR1_01	NA	NA	NA	rs12728	0.32	0.32	0.299	0.266174	0.4801	0.2688	0.3458	0.1392	0.1585	0.48	0.24	0.37	0.15	0.3941	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.556592	NA	NA	0.504419	0.199955	NA	0.232	NA	6.2880476
1023	17	45994044	45994044	C	T	exonic	SP2	NA	synonymous SNV	SP2:NM_003110:exon3:c.C607T:p.L203L	exonic	ENSG00000167182	NA	synonymous SNV	ENSG00000167182:ENST00000376741:exon3:c.C607T:p.L203L	Score=520;Name=lod=173	NA	17q21.32	Score=910;Name=V$MEIS1_01	NA	NA	NA	rs2228253	0.57	0.57	0.563	0.567891	0.4622	0.7748	0.4813	0.615	0.4611	0.45	0.75	0.48	0.61	0.4818	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.273504	NA	NA	0.436512	0.585338	NA	0.478	NA	6.2861546
1023	3	132166266	132166266	T	G	exonic	DNAJC13	NA	synonymous SNV	DNAJC13:NM_015268:exon4:c.T246G:p.T82T	exonic	ENSG00000138246	NA	synonymous SNV	ENSG00000138246:ENST00000260818:exon4:c.T246G:p.T82T	Score=711;Name=lod=1035	NA	3q22.1	NA	NA	NA	NA	rs11917172	0.11	0.11	0.103	0.107428	0.1292	0.1419	0.1398	0.0053	0.1646	0.14	0.13	0.14	0.01	0.1301	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.274479	1.274479	NA	0.12186	0.026782	NA	0.109	NA	6.2855066
1023	11	103152919	103152919	G	A	exonic	DYNC2H1	NA	synonymous SNV	DYNC2H1:NM_001377:exon72:c.G10773A:p.T3591T,DYNC2H1:NM_001080463:exon73:c.G10794A:p.T3598T	exonic	ENSG00000187240	NA	synonymous SNV	ENSG00000187240:ENST00000375735:exon72:c.G10773A:p.T3591T,ENSG00000187240:ENST00000398093:exon73:c.G10794A:p.T3598T	Score=566;Name=lod=265	NA	11q22.3	NA	NA	NA	NA	rs12574626	0.18	0.18	0.198	0.19369	0.1272	0.0913	0.1282	0.4198	0.1084	0.14	0.09	0.13	0.4	0.1368	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.922656	NA	NA	0.117241	0.360633	NA	0.145	NA	6.2854256
1023	16	89350038	89350038	G	A	exonic	ANKRD11	NA	nonsynonymous SNV	ANKRD11:NM_001256183:exon9:c.C2912T:p.A971V,ANKRD11:NM_013275:exon9:c.C2912T:p.A971V,ANKRD11:NM_001256182:exon10:c.C2912T:p.A971V	exonic	ENSG00000167522	NA	nonsynonymous SNV	ENSG00000167522:ENST00000301030:exon9:c.C2912T:p.A971V,ENSG00000167522:ENST00000378330:exon10:c.C2912T:p.A971V	NA	NA	16q24.3	NA	NA	NA	NA	rs2279348	0.54	0.54	0.56	0.533546	0.6819	0.1627	0.6009	0.6248	0.592	0.67	0.22	0.65	0.65	0.6379	0.73	0.29	T	0.014	B	0.001	B	0.517	N	1.000	P	0.41	N	1.2	T	-0.978	T	0.000	T	0.024	0.483	6.619	-3.5	-0.822	0.682	1.112	0.482701	NA	NA	0.728425	0.635578	NA	0.616	NA	6.2851084
1023	14	106878038	106878038	G	A	intergenic	LINC00226,LINC00221	dist=133072;dist=60417	NA	NA	exonic	ENSG00000211959	NA	synonymous SNV	ENSG00000211959:ENST00000390619:exon1:c.C39T:p.F13F	Score=405;Name=lod=59	NA	14q32.33	NA	NA	Name=2	NA	rs113208890	NA	NA	0.119	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.215	0.054	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.000108	NA	NA	NA	NA	NA	0.036	NA	6.285
1024	2	207008763	207008763	C	A	exonic	NDUFS1	NA	synonymous SNV	NDUFS1:NM_001199982:exon7:c.G633T:p.A211A,NDUFS1:NM_001199981:exon9:c.G858T:p.A286A,NDUFS1:NM_001199983:exon9:c.G795T:p.A265A,NDUFS1:NM_001199984:exon10:c.G1008T:p.A336A,NDUFS1:NM_005006:exon10:c.G966T:p.A322A	exonic	ENSG00000023228	NA	synonymous SNV	ENSG00000023228:ENST00000457011:exon6:c.G618T:p.A206A,ENSG00000023228:ENST00000432169:exon7:c.G633T:p.A211A,ENSG00000023228:ENST00000423725:exon9:c.G795T:p.A265A,ENSG00000023228:ENST00000440274:exon9:c.G858T:p.A286A,ENSG00000023228:ENST00000233190:exon10:c.G966T:p.A322A,ENSG00000023228:ENST00000449699:exon10:c.G966T:p.A322A,ENSG00000023228:ENST00000455934:exon10:c.G1008T:p.A336A	Score=544;Name=lod=217	NA	2q33.3	NA	NA	NA	NA	rs1127566	0.47	0.47	0.431	0.46226	0.4831	0.2609	0.5778	0.6475	0.316	0.49	0.25	0.58	0.61	0.4537	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.155429	NA	NA	0.445116	0.635497	ID=COSM1129370;OCCURENCE=1(prostate)	0.457	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117710.2;CLNDSDB=.;CLNDSDBID=.	6.2847506
1024	1	76251884	76251884	G	A	UTR5	RABGGTB	NM_004582:c.-73G>A	NA	NA	UTR5;UTR3	ENSG00000137955;ENSG00000117054	ENST00000535300:c.-5316G>A;ENST00000528016:c.*188G>A	NA	NA	NA	NA	1p31.1	NA	Name=GTF2F1_(RAP-74),TBP,GTF2B,TCF12,Nrf1,p300_(N-15),Oct-2,HEY1,NFKB,ELF1_(SC-631),Rad21,c-Myc,Max,Pol2-4H8,KAP1,TAF7_(SQ-8),YY1_(C-20),Sin3Ak-20,Pol2(phosphoS2),Ini1,YY1,STAT3,NANOG_(SC-33759),PU.1,Mxi1_(bHLH),RFX5_(N-494),NRSF,Pol2,USF2,POU2F2,Pol2(b),TAF1	Name=148	NA	rs76671446	0.01	0.01	0.008	0.00778754	0.0179	NA	0.0173	0.003	0.0051	0.01	NA	0.02	0.0041	NA	0.031	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.033422	NA	NA	0.030798	0.003613	NA	0.007	NA	6.2846354
1024	2	203139844	203139844	T	C	exonic	NOP58	NA	synonymous SNV	NOP58:NM_015934:exon2:c.T54C:p.N18N	exonic	ENSG00000055044	NA	synonymous SNV	ENSG00000055044:ENST00000264279:exon2:c.T54C:p.N18N,ENSG00000055044:ENST00000426814:exon2:c.T54C:p.N18N	Score=634;Name=lod=504	NA	2q33.1	NA	NA	NA	NA	rs80282360	0.1	0.1	0.071	0.123403	0.1362	0.123	0.1427	0.0045	0.2577	0.14	0.1	0.15	0.01	0.1286	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.746728	NA	NA	0.11753	0.024135	ID=COSM1162358;OCCURENCE=1(pancreas)	0.065	NA	6.2843366
1024	1	228461129	228461129	A	G	exonic	OBSCN	NA	nonsynonymous SNV	OBSCN:NM_001271223:exon21:c.A6143G:p.H2048R	exonic	ENSG00000154358	NA	nonsynonymous SNV	ENSG00000154358:ENST00000359599:exon6:c.A1559G:p.H520R,ENSG00000154358:ENST00000570156:exon21:c.A6143G:p.H2048R	NA	NA	1q42.13	NA	NA	NA	NA	rs1188724	0.72	0.72	0.692	0.69349	0.663	0.75	0.6974	0.8442	0.4601	0.66	0.74	0.7	0.82	0.6908	0.82	0.4	T	.	.	.	.	.	.	1.000	P	.	.	-0.12	T	-1.004	T	0.000	T	0.018	-1.702	0.011	-1.1	-0.621	-1.735	11.816	-1.701638	NA	0.78	0.695348	0.816881	NA	0.717	NA	6.2841854
1024	7	72891754	72891754	C	T	exonic	BAZ1B	NA	synonymous SNV	BAZ1B:NM_032408:exon7:c.G2037A:p.S679S	exonic	ENSG00000009954	NA	synonymous SNV	ENSG00000009954:ENST00000339594:exon7:c.G2037A:p.S679S,ENSG00000009954:ENST00000404251:exon7:c.G2037A:p.S679S	NA	NA	7q11.23	Score=953;Name=V$NFKAPPAB_01	NA	Name=5	NA	rs2074754	0.37	0.37	0.344	0.347644	0.4682	0.4395	0.4784	0.0431	0.4479	0.48	0.47	0.46	0.03	0.4452	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.373083	NA	NA	0.469186	0.123014	NA	0.304	NA	6.2840806
1024	17	72937851	72937851	G	A	exonic	OTOP3	NA	nonsynonymous SNV	OTOP3:NM_001272005:exon2:c.G383A:p.R128Q,OTOP3:NM_178233:exon2:c.G437A:p.R146Q	exonic	ENSG00000182938	NA	nonsynonymous SNV	ENSG00000182938:ENST00000328801:exon2:c.G437A:p.R146Q	NA	NA	17q25.1	NA	NA	NA	NA	rs9890664	0.67	0.67	0.655	0.653754	0.6948	0.7341	0.7695	0.4947	0.6616	0.73	0.7	0.74	0.48	0.6817	0.74	0.53	T	0.0	B	0.001	B	0.982	N	1.000	P	0.115	N	3.17	T	-1.005	T	0.000	T	0.016	-0.78	0.731	-6.34	-0.910	-0.031	9.655	-0.780058	NA	0.39	0.673023	0.551521	NA	0.63	NA	6.2838104
1024	5	141029072	141029072	G	A	exonic	FCHSD1	NA	synonymous SNV	FCHSD1:NM_033449:exon5:c.C265T:p.L89L	exonic	ENSG00000197948	NA	synonymous SNV	ENSG00000197948:ENST00000522126:exon4:c.C37T:p.L13L,ENSG00000197948:ENST00000435817:exon5:c.C265T:p.L89L,ENSG00000197948:ENST00000519800:exon5:c.C259T:p.L87L,ENSG00000197948:ENST00000522783:exon5:c.C259T:p.L87L	Score=536;Name=lod=202	NA	5q31.3	NA	NA	NA	NA	rs11739451	0.12	0.12	0.106	0.111022	0.1183	0.0992	0.1599	0.0522	0.1605	0.13	0.12	0.15	0.07	0.1385	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.984295	NA	NA	0.126761	0.06384	NA	0.094	NA	6.2831056
1024	1	1551927	1551927	T	C	exonic	MIB2	NA	nonsynonymous SNV	MIB2:NM_001170686:exon2:c.T214C:p.F72L,MIB2:NM_001170687:exon2:c.T214C:p.F72L,MIB2:NM_001170688:exon2:c.T214C:p.F72L,MIB2:NM_080875:exon2:c.T214C:p.F72L	exonic	ENSG00000197530	NA	nonsynonymous SNV	ENSG00000197530:ENST00000355826:exon2:c.T214C:p.F72L,ENSG00000197530:ENST00000357210:exon2:c.T43C:p.F15L,ENSG00000197530:ENST00000360522:exon2:c.T43C:p.F15L,ENSG00000197530:ENST00000378710:exon2:c.T43C:p.F15L,ENSG00000197530:ENST00000489635:exon2:c.T43C:p.F15L,ENSG00000197530:ENST00000505820:exon2:c.T214C:p.F72L,ENSG00000197530:ENST00000514363:exon2:c.T43C:p.F15L,ENSG00000197530:ENST00000518681:exon2:c.T214C:p.F72L,ENSG00000197530:ENST00000520777:exon2:c.T214C:p.F72L	NA	NA	1p36.33	NA	NA	Name=21	NA	rs7418389	0.51	0.51	0.512	0.477037	0.7058	0.2054	0.4813	0.5378	0.4366	0.71	0.19	0.57	0.54	0.6228	0.72	1	T	0.0	B	0.0	B	.	.	0.999	P	0	N	1.45	T	-0.931	T	0.000	T	0.099	-0.435	1.975	0.364	0.044	0.221	1.104	-0.435458	NA	1	0.721899	0.560063	NA	0.558	NA	6.2828344
1024	7	93544356	93544356	T	C	intergenic	GNGT1,GNG11	dist=3871;dist=6660	NA	NA	intergenic	ENSG00000127928,ENSG00000127920	dist=3779;dist=6655	NA	NA	Score=573;Name=lod=283	NA	7q21.3	NA	Name=AP-2gamma,p300_(N-15),JunD,c-Fos,p300,CEBPB	Name=109	NA	rs112031384	0.1	0.1	0.085	0.115815	0.0517	0.1161	0.1441	0.1634	0.0971	0.05	0.09	0.11	0.18	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.578875	NA	NA	NA	NA	NA	0.08	NA	6.2816334
1024	22	50720622	50720622	C	T	exonic	PLXNB2	NA	synonymous SNV	PLXNB2:NM_012401:exon19:c.G3108A:p.Q1036Q	exonic	ENSG00000196576	NA	synonymous SNV	ENSG00000196576:ENST00000359337:exon19:c.G3108A:p.Q1036Q,ENSG00000196576:ENST00000449103:exon19:c.G3108A:p.Q1036Q	Score=259;Name=lod=15	NA	22q13.33	NA	Name=ERalpha_a	NA	NA	rs11547728	0.38	0.38	0.373	0.381589	0.4791	0.2688	0.3112	0.3192	0.5317	0.48	0.31	0.31	0.33	0.4409	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.613426	NA	NA	0.466073	0.342144	NA	0.29	NA	6.2805936
1024	8	17198953	17198953	T	C	exonic	MTMR7	NA	synonymous SNV	MTMR7:NM_004686:exon6:c.A651G:p.L217L	exonic	ENSG00000003987	NA	synonymous SNV	ENSG00000003987:ENST00000180173:exon6:c.A651G:p.L217L,ENSG00000003987:ENST00000521857:exon6:c.A651G:p.L217L	Score=513;Name=lod=162	NA	8p22	NA	NA	NA	NA	rs4921756	0.07	0.07	0.05	0.0445288	0.1491	0.002	0.0634	0.0076	0.0174	0.15	0.0035	0.07	0.01	0.0952	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.991133	NA	NA	0.142674	0.029959	NA	0.08	NA	6.2796926
1024	13	46946157	46946157	C	T	exonic	KIAA0226L	NA	nonsynonymous SNV	KIAA0226L:NM_025113:exon3:c.G454A:p.G152R	exonic	ENSG00000102445	NA	nonsynonymous SNV	ENSG00000102445:ENST00000378787:exon2:c.G454A:p.G152R,ENSG00000102445:ENST00000417405:exon2:c.G49A:p.G17R,ENSG00000102445:ENST00000534925:exon2:c.G49A:p.G17R,ENSG00000102445:ENST00000378781:exon3:c.G454A:p.G152R,ENSG00000102445:ENST00000378784:exon3:c.G253A:p.G85R,ENSG00000102445:ENST00000378797:exon3:c.G454A:p.G152R,ENSG00000102445:ENST00000389908:exon3:c.G454A:p.G152R,ENSG00000102445:ENST00000429979:exon3:c.G454A:p.G152R,ENSG00000102445:ENST00000439642:exon3:c.G454A:p.G152R,ENSG00000102445:ENST00000441284:exon3:c.G454A:p.G152R	NA	NA	13q14.13	NA	NA	NA	NA	rs1408184	0.47	0.47	0.444	0.451478	0.3469	0.5923	0.4121	0.5295	0.3364	0.34	0.6	0.42	0.57	0.3793	0.6	0.75	T	0.0	B	0.0	B	0.386	N	1.000	P	-1.1	N	1.03	T	-0.931	T	0.000	T	0.282	0.698	7.723	0.984	0.153	-0.213	8.513	0.697533	NA	0.48	0.327558	0.482978	NA	0.442	NA	6.2795754
1024	19	49132634	49132634	G	A	exonic	SPHK2	NA	synonymous SNV	SPHK2:NM_001204160:exon6:c.G1461A:p.L487L,SPHK2:NM_001243876:exon6:c.G951A:p.L317L,SPHK2:NM_001204158:exon7:c.G1392A:p.L464L,SPHK2:NM_001204159:exon7:c.G1569A:p.L523L,SPHK2:NM_020126:exon7:c.G1569A:p.L523L	exonic	ENSG00000063176	NA	synonymous SNV	ENSG00000063176:ENST00000443164:exon5:c.G1755A:p.L585L,ENSG00000063176:ENST00000599029:exon5:c.G1461A:p.L487L,ENSG00000063176:ENST00000599748:exon6:c.G1461A:p.L487L,ENSG00000063176:ENST00000245222:exon7:c.G1569A:p.L523L,ENSG00000063176:ENST00000598088:exon7:c.G1569A:p.L523L,ENSG00000063176:ENST00000600537:exon7:c.G1392A:p.L464L,ENSG00000063176:ENST00000340932:exon8:c.G1455A:p.L485L	Score=445;Name=lod=86	NA	19q13.33	NA	NA	NA	NA	rs3745733	0.09	0.09	0.094	0.0756789	0.1203	0.0714	0.0994	0.0272	0.0828	0.12	0.08	0.11	0.04	0.1286	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.92996	NA	NA	0.138268	0.04	ID=COSM439915;OCCURENCE=1(breast)	0.08	NA	6.2794986
1024	3	54930794	54930794	C	T	exonic	CACNA2D3	NA	synonymous SNV	CACNA2D3:NM_018398:exon26:c.C2265T:p.G755G	exonic	ENSG00000157445	NA	synonymous SNV	ENSG00000157445:ENST00000490478:exon25:c.C1983T:p.G661G,ENSG00000157445:ENST00000288197:exon26:c.C2265T:p.G755G,ENSG00000157445:ENST00000474759:exon26:c.C2265T:p.G755G,ENSG00000157445:ENST00000415676:exon27:c.C2265T:p.G755G	Score=618;Name=lod=435	NA	3p14.3	NA	NA	NA	NA	rs17054524	0.11	0.11	0.104	0.117812	0.1272	0.0536	0.111	0.1293	0.1636	0.12	0.05	0.14	0.14	0.1222	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.133095	NA	NA	0.137873	0.124874	NA	0.087	NA	6.2793936
1024	12	132631855	132631855	C	T	exonic	NOC4L	NA	synonymous SNV	NOC4L:NM_024078:exon4:c.C375T:p.F125F	exonic	ENSG00000184967	NA	synonymous SNV	ENSG00000184967:ENST00000330579:exon4:c.C375T:p.F125F,ENSG00000184967:ENST00000541954:exon4:c.C276T:p.F92F	Score=456;Name=lod=95	NA	12q24.33	NA	NA	NA	NA	rs11543305	0.05	0.05	0.05	0.0435304	0.1064	NA	0.072	0.0061	0.0542	0.1	NA	0.07	0.01	0.1692	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.258989	NA	NA	0.111695	0.022467	NA	0.022	NA	6.2793716
1024	16	77328895	77328895	C	T	exonic	ADAMTS18	NA	synonymous SNV	ADAMTS18:NM_199355:exon19:c.G2931A:p.V977V	exonic	ENSG00000140873	NA	synonymous SNV	ENSG00000140873:ENST00000282849:exon19:c.G2931A:p.V977V	Score=490;Name=lod=131	NA	16q23.1	NA	NA	NA	NA	rs12935229	0.13	0.13	0.114	0.114617	0.1262	0.1935	0.1873	0.0053	0.1176	0.13	0.19	0.17	0.01	0.1308	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.155314	NA	NA	0.130698	0.021611	NA	0.065	NA	6.2789686
1024	7	4153824	4153824	A	G	exonic	SDK1	NA	synonymous SNV	SDK1:NM_152744:exon25:c.A3741G:p.E1247E	exonic	ENSG00000146555	NA	synonymous SNV	ENSG00000146555:ENST00000389531:exon25:c.A3741G:p.E1247E,ENSG00000146555:ENST00000404826:exon25:c.A3741G:p.E1247E	Score=510;Name=lod=158	NA	7p22.2	NA	NA	NA	NA	rs2141076	0.11	0.11	0.122	0.130791	0.1223	0.001	0.0836	0.2504	0.1452	0.12	0.0017	0.07	0.26	0.1306	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.521029	NA	NA	0.135233	0.225828	NA	0.109	NA	6.2785336
1024	19	33655144	33655144	C	T	exonic	WDR88	NA	synonymous SNV	WDR88:NM_173479:exon9:c.C1122T:p.N374N	exonic	ENSG00000166359	NA	synonymous SNV	ENSG00000166359:ENST00000355868:exon9:c.C1122T:p.N374N,ENSG00000166359:ENST00000361680:exon9:c.C1122T:p.N374N	Score=489;Name=lod=129	NA	19q13.11	NA	NA	NA	NA	rs1981827	0.14	0.14	0.147	0.176118	0.1282	0.1607	0.1239	0.115	0.3609	0.13	0.17	0.15	0.11	0.1482	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.279006	NA	NA	0.111744	0.114616	NA	0.203	NA	6.2785226
1024	1	16890484	16890484	G	C	exonic	NBPF1	NA	unknown	UNKNOWN	exonic	ENSG00000219481	NA	nonsynonymous SNV	ENSG00000219481:ENST00000430580:exon29:c.C3374G:p.T1125R	NA	NA	1p36.13	NA	NA	Name=9	NA	rs12117084	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3891	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.519334	NA	0.03	NA	NA	NA	0.022	NA	6.2775667
1024	15	70345626	70345626	C	T	exonic	TLE3	NA	synonymous SNV	TLE3:NM_001105192:exon17:c.G1914A:p.T638T,TLE3:NM_005078:exon17:c.G1923A:p.T641T,TLE3:NM_020908:exon17:c.G1887A:p.T629T	exonic	ENSG00000140332	NA	synonymous SNV	ENSG00000140332:ENST00000559191:exon6:c.G666A:p.T222T,ENSG00000140332:ENST00000539550:exon15:c.G1704A:p.T568T,ENSG00000140332:ENST00000560589:exon15:c.G1755A:p.T585T,ENSG00000140332:ENST00000558201:exon16:c.G1941A:p.T647T,ENSG00000140332:ENST00000559048:exon16:c.G1923A:p.T641T,ENSG00000140332:ENST00000560939:exon16:c.G1929A:p.T643T,ENSG00000140332:ENST00000317509:exon17:c.G1887A:p.T629T,ENSG00000140332:ENST00000440567:exon17:c.G1893A:p.T631T,ENSG00000140332:ENST00000442299:exon17:c.G1899A:p.T633T,ENSG00000140332:ENST00000451782:exon17:c.G1914A:p.T638T,ENSG00000140332:ENST00000557907:exon17:c.G1899A:p.T633T,ENSG00000140332:ENST00000557997:exon17:c.G1899A:p.T633T,ENSG00000140332:ENST00000558379:exon17:c.G1908A:p.T636T,ENSG00000140332:ENST00000558939:exon17:c.G1923A:p.T641T,ENSG00000140332:ENST00000559929:exon17:c.G1953A:p.T651T	NA	NA	15q23	Score=835;Name=V$GR_Q6	Name=ZNF263	NA	NA	rs1057865	0.35	0.35	0.33	0.363019	0.4791	0.256	0.4726	0.2284	0.4581	0.47	0.25	0.46	0.21	0.44	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.329255	NA	NA	0.470602	0.273256	NA	0.435	NA	6.2769646
1024	8	104312341	104312341	A	G	exonic	FZD6	NA	synonymous SNV	FZD6:NM_001164615:exon2:c.A6G:p.E2E,FZD6:NM_003506:exon2:c.A6G:p.E2E	exonic	ENSG00000164930	NA	synonymous SNV	ENSG00000164930:ENST00000521195:exon1:c.A6G:p.E2E,ENSG00000164930:ENST00000358755:exon2:c.A6G:p.E2E,ENSG00000164930:ENST00000519011:exon2:c.A6G:p.E2E,ENSG00000164930:ENST00000522484:exon2:c.A6G:p.E2E,ENSG00000164930:ENST00000522566:exon2:c.A6G:p.E2E	NA	NA	8q22.3	NA	Name=Pol2	Name=48	NA	rs3736047	0.47	0.47	0.446	0.457668	0.4583	0.6379	0.5159	0.3313	0.4008	0.45	0.6	0.5	0.32	0.4651	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.477468	NA	NA	0.466395	0.326146	NA	0.478	NA	6.2768716
1024	19	12692001	12692001	G	A	exonic	ZNF490	NA	synonymous SNV	ZNF490:NM_020714:exon5:c.C888T:p.H296H	exonic	ENSG00000188033	NA	synonymous SNV	ENSG00000188033:ENST00000311437:exon5:c.C888T:p.H296H	Score=433;Name=lod=77	NA	19p13.2	NA	Name=SETDB1,ZNF274,KAP1	NA	NA	rs3745651	0.26	0.26	0.231	0.20627	0.5099	0.0536	0.2983	0.0386	0.2127	0.51	0.05	0.36	0.03	0.3698	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.168907	NA	NA	0.510465	0.104403	NA	0.29	NA	6.2765016
1025	10	13230934	13230934	C	T	exonic	MCM10	NA	synonymous SNV	MCM10:NM_018518:exon10:c.C1269T:p.S423S,MCM10:NM_182751:exon10:c.C1272T:p.S424S	exonic	ENSG00000065328	NA	synonymous SNV	ENSG00000065328:ENST00000378694:exon9:c.C1269T:p.S423S,ENSG00000065328:ENST00000378714:exon10:c.C1269T:p.S423S,ENSG00000065328:ENST00000484800:exon10:c.C1272T:p.S424S	Score=566;Name=lod=265	NA	10p13	NA	NA	NA	NA	rs7904071	0.06	0.06	0.043	0.0409345	0.1421	NA	0.0576	0.0053	0.0153	0.14	NA	0.08	0.002	0.1076	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.385353	NA	NA	0.143721	0.030186	NA	0.087	NA	6.2732456
1025	16	1291188	1291188	C	T	exonic	TPSAB1	NA	synonymous SNV	TPSAB1:NM_003294:exon3:c.C96T:p.V32V	exonic	ENSG00000172236	NA	synonymous SNV	ENSG00000172236:ENST00000461509:exon2:c.C117T:p.V39V,ENSG00000172236:ENST00000338844:exon3:c.C96T:p.V32V	Score=340;Name=lod=32	NA	16p13.3	NA	NA	NA	NA	rs17434400	0.2	0.2	0.181	NA	NA	NA	NA	NA	NA	0.16	0.3	0.17	0.18	0.3936	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.21028	NA	NA	NA	NA	ID=COSM434652;OCCURENCE=1(breast)	NA	NA	6.2730666
1025	18	54815025	54815025	G	T	exonic	BOD1L2	NA	nonsynonymous SNV	BOD1L2:NM_001257964:exon1:c.G482T:p.G161V	exonic	ENSG00000228075	NA	nonsynonymous SNV	ENSG00000228075:ENST00000585477:exon1:c.G482T:p.G161V	NA	NA	18q21.31	NA	NA	NA	NA	rs11151997	0.53	0.53	0.544	0.568091	0.5109	0.5794	0.5519	0.5893	0.5982	0.48	0.58	0.52	0.54	0.5502	0.67	0.13	T	0.148	B	0.012	B	.	.	1.000	P	.	.	.	.	-0.935	T	0.000	T	0.085	1.379	10.54	-0.478	0.012	0.004	3.814	1.379007	1.379007	NA	NA	NA	NA	0.609	NA	6.2722334
1025	5	178507069	178507069	T	C	exonic	ZNF354C	NA	nonsynonymous SNV	ZNF354C:NM_014594:exon5:c.T1636C:p.F546L	exonic	ENSG00000177932	NA	nonsynonymous SNV	ENSG00000177932:ENST00000315475:exon5:c.T1636C:p.F546L	NA	NA	5q35.3	NA	NA	NA	NA	rs1445846	0.76	0.76	0.765	0.775958	0.666	0.8879	0.7406	0.7368	0.8517	0.68	0.9	0.75	0.75	0.7212	0.9	0.01	D	0.0	B	0.0	B	.	.	1.000	P	-0.28	N	3.61	T	-1.085	T	0.000	T	0.046	2.878	15.59	1.48	-0.044	0.686	2.635	2.878252	2.878252	1	0.67454	0.71578	NA	0.71	NA	6.2715934
1025	1	110211956	110211956	C	T	exonic	GSTM2	NA	synonymous SNV	GSTM2:NM_000848:exon4:c.C222T:p.N74N,GSTM2:NM_001142368:exon4:c.C222T:p.N74N	exonic	ENSG00000213366	NA	synonymous SNV	ENSG00000213366:ENST00000241337:exon4:c.C222T:p.N74N,ENSG00000213366:ENST00000369827:exon4:c.C216T:p.N72N,ENSG00000213366:ENST00000369829:exon4:c.C222T:p.N74N,ENSG00000213366:ENST00000369831:exon4:c.C222T:p.N74N,ENSG00000213366:ENST00000442650:exon4:c.C222T:p.N74N,ENSG00000213366:ENST00000460717:exon4:c.C222T:p.N74N,ENSG00000213366:ENST00000467579:exon4:c.C222T:p.N74N	Score=579;Name=lod=301	NA	1p13.3	NA	NA	NA	NA	rs592792	0.11	0.11	0.11	0.0938498	0.1481	0.001	0.0836	0.1634	0.047	0.16	NA	0.09	0.2	0.1069	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.064268	NA	NA	0.14093	0.162733	NA	0.109	NA	6.2707366
1025	14	21467913	21467913	T	G	exonic	SLC39A2	NA	nonsynonymous SNV	SLC39A2:NM_001256588:exon2:c.T128G:p.L43R,SLC39A2:NM_014579:exon2:c.T128G:p.L43R	exonic	ENSG00000165794	NA	nonsynonymous SNV	ENSG00000165794:ENST00000298681:exon2:c.T128G:p.L43R,ENSG00000165794:ENST00000554422:exon2:c.T128G:p.L43R	NA	NA	14q11.2	NA	NA	NA	NA	rs2234632	0.76	0.76	0.754	0.760383	0.6859	0.7153	0.7349	0.9395	0.6595	0.68	0.68	0.73	0.96	0.7016	0.96	1	T	0.0	B	0.0	B	0.073	N	1.000	P	-0.865	N	0.75	T	-0.956	T	0.000	T	0.066	-2.865	0	2.8	0.056	0.394	1.950	-2.864885	NA	1	0.675233	0.912846	NA	0.797	NA	6.2706004
1025	6	117631431	117631431	T	G	exonic	ROS1	NA	synonymous SNV	ROS1:NM_002944:exon40:c.A6247C:p.R2083R	exonic	ENSG00000047936	NA	synonymous SNV	ENSG00000047936:ENST00000368508:exon40:c.A6247C:p.R2083R,ENSG00000047936:ENST00000368507:exon41:c.A6229C:p.R2077R	Score=524;Name=lod=180	NA	6q22.1	NA	NA	NA	NA	rs552183	0.14	0.14	0.121	0.11901	0.1451	0.119	0.1052	0.1331	0.0828	0.15	0.12	0.1	0.17	0.1184	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.970303	NA	NA	0.133488	0.14049	NA	0.145	NA	6.2696786
1025	10	101379795	101379795	G	C	intronic	SLC25A28	NA	NA	NA	intronic	ENSG00000155287	NA	NA	NA	Score=729;Name=lod=1229	NA	10q24.2	NA	Name=Sin3Ak-20	Name=14	NA	rs12252561	0.24	0.24	0.241	0.251797	0.2485	0.1994	0.2536	0.2436	0.319	0.25	0.23	0.25	0.24	0.2568	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.053212	NA	NA	0.225175	0.222812	NA	0.167	NA	6.269525
1025	11	5536848	5536848	G	A	exonic	UBQLNL	NA	nonsynonymous SNV	UBQLNL:NM_145053:exon1:c.C824T:p.A275V	exonic	ENSG00000175518	NA	nonsynonymous SNV	ENSG00000175518:ENST00000380184:exon1:c.C824T:p.A275V	NA	NA	11p15.4	NA	NA	NA	NA	rs2017433	0.53	0.53	0.53	0.532149	0.7266	0.3988	0.6138	0.3707	0.6299	0.71	0.36	0.65	0.38	0.6252	0.71	0.26	T	0.011	B	0.011	B	0.475	N	1.000	P	0.425	N	0.74	T	-0.986	T	0.000	T	0.035	-0.233	2.876	2.19	0.298	0.594	4.409	-0.232954	NA	0.46	0.712125	0.436165	ID=COSM147120;OCCURENCE=1(stomach)	0.601	NA	6.2694084
1025	19	54276402	54276402	T	C	intergenic	MIR519A2,MIR371A	dist=10718;dist=14527	NA	NA	ncRNA_exonic	ENSG00000229000	NA	NA	NA	Score=633;Name=lod=500	NA	19q13.42	NA	Name=GATA3_(SC-268),SMC3_(ab9263),Rad21,CTCF,GATA-2,CTCF_(SC-5916),CTCF_(C-20)	Name=133	NA	rs11084281	0.62	0.62	0.618	0.602436	0.7306	0.5129	0.6542	0.5159	0.6431	0.74	0.51	0.65	0.56	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.272002	2.272002	NA	NA	NA	NA	0.616	NA	6.2694
1025	16	77327018	77327018	G	A	exonic	ADAMTS18	NA	synonymous SNV	ADAMTS18:NM_199355:exon20:c.C3144T:p.C1048C	exonic	ENSG00000140873	NA	synonymous SNV	ENSG00000140873:ENST00000282849:exon20:c.C3144T:p.C1048C	Score=464;Name=lod=103	NA	16q23.1	NA	NA	NA	NA	rs35296483	0.13	0.13	0.105	0.124201	0.1262	0.1935	0.2507	0.0061	0.1207	0.13	0.2	0.21	0.01	0.1408	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.415631	NA	NA	0.130814	0.02343	NA	0.08	NA	6.2688526
1025	9	139840580	139840580	C	T	exonic	C8G	NA	synonymous SNV	C8G:NM_000606:exon4:c.C390T:p.T130T	exonic	ENSG00000176919	NA	synonymous SNV	ENSG00000176919:ENST00000224181:exon4:c.C390T:p.T130T,ENSG00000176919:ENST00000371634:exon4:c.C390T:p.T130T	NA	NA	9q34.3	NA	Name=USF-1	NA	NA	rs20574	0.12	0.12	0.113	0.108427	0.1312	0.0288	0.1066	0.177	0.0757	0.14	0.03	0.12	0.17	0.1256	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.323828	NA	NA	0.141294	0.189373	NA	0.029	NA	6.2685726
1025	4	98893437	98893437	A	G	exonic	STPG2	NA	synonymous SNV	STPG2:NM_174952:exon7:c.T927C:p.D309D	exonic	ENSG00000163116	NA	synonymous SNV	ENSG00000163116:ENST00000522676:exon1:c.T69C:p.D23D,ENSG00000163116:ENST00000295268:exon7:c.T927C:p.D309D	Score=422;Name=lod=69	NA	4q23	Score=885;Name=V$GATA1_04	NA	NA	NA	rs783960	0.41	0.41	0.388	0.408946	0.4742	0.2431	0.5403	0.3707	0.4714	0.47	0.23	0.52	0.42	0.4589	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.233914	NA	NA	0.465	0.358148	ID=COSM1130976;OCCURENCE=1(prostate)	0.362	NA	6.2685666
1025	2	220473355	220473355	G	A	exonic	STK11IP	NA	nonsynonymous SNV	STK11IP:NM_052902:exon15:c.G1687A:p.V563I	exonic	ENSG00000144589	NA	nonsynonymous SNV	ENSG00000144589:ENST00000295641:exon15:c.G1687A:p.V563I,ENSG00000144589:ENST00000456909:exon15:c.G1654A:p.V552I	NA	NA	2q35	NA	NA	NA	NA	rs673951	0.38	0.38	0.345	0.350439	0.3598	0.6825	0.3919	0.0272	0.4059	0.37	0.71	0.38	0.04	0.3671	0.71	0.43	T	0.394	B	0.09	B	0.893	N	1.000	P	1.87	L	3.5	T	-1.030	T	0.000	T	0.011	-0.232	2.879	0.456	-0.102	-0.183	4.178	-0.232288	NA	0.44	0.33804	0.07311	NA	0.246	NA	6.2683934
1025	5	96139250	96139250	C	G	exonic	ERAP1	NA	nonsynonymous SNV	ERAP1:NM_001040458:exon2:c.G380C:p.R127P,ERAP1:NM_001198541:exon2:c.G380C:p.R127P,ERAP1:NM_016442:exon2:c.G380C:p.R127P	exonic	ENSG00000164307	NA	nonsynonymous SNV	ENSG00000164307:ENST00000296754:exon2:c.G380C:p.R127P,ENSG00000164307:ENST00000443439:exon2:c.G380C:p.R127P,ENSG00000164307:ENST00000507154:exon3:c.G380C:p.R127P	NA	NA	5q15	NA	NA	NA	NA	rs26653	0.57	0.57	0.552	0.5625	0.7177	0.5208	0.5879	0.4818	0.5368	0.71	0.48	0.6	0.45	0.6387	0.71	0.4	T	0.0	B	0.002	B	0.575	N	1.000	P	-0.7	N	4.21	T	-0.993	T	0.000	T	0.127	-0.537	1.56	3.71	0.292	0.182	6.188	-0.537004	NA	0.22	0.708605	0.526328	NA	0.645	NA	6.2683284
1025	9	102595069	102595069	G	A	exonic	NR4A3	NA	synonymous SNV	NR4A3:NM_006981:exon4:c.G1050A:p.Q350Q,NR4A3:NM_173199:exon4:c.G1050A:p.Q350Q,NR4A3:NM_173200:exon5:c.G1083A:p.Q361Q	exonic	ENSG00000119508	NA	synonymous SNV	ENSG00000119508:ENST00000330847:exon3:c.G1083A:p.Q361Q,ENSG00000119508:ENST00000338488:exon4:c.G1050A:p.Q350Q,ENSG00000119508:ENST00000395097:exon4:c.G1050A:p.Q350Q	Score=710;Name=lod=1022	NA	9q22.33	NA	NA	NA	NA	rs41274654	0.09	0.09	0.067	0.0796725	0.1441	0.0625	0.1239	0.0189	0.0818	0.13	0.06	0.13	0.03	0.114	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.006054	NA	NA	0.141512	0.041307	NA	0.072	NA	6.2670546
1025	2	26536694	26536694	C	T	exonic	GPR113	NA	nonsynonymous SNV	GPR113:NM_153835:exon5:c.G613A:p.A205T,GPR113:NM_001145169:exon7:c.G1003A:p.A335T,GPR113:NM_001145168:exon8:c.G1210A:p.A404T	exonic	ENSG00000173567	NA	nonsynonymous SNV	ENSG00000173567:ENST00000541401:exon2:c.G19A:p.A7T,ENSG00000173567:ENST00000333478:exon5:c.G613A:p.A205T,ENSG00000173567:ENST00000447444:exon5:c.G613A:p.A205T,ENSG00000173567:ENST00000421160:exon7:c.G1003A:p.A335T,ENSG00000173567:ENST00000311519:exon8:c.G1210A:p.A404T	NA	NA	2p23.3	NA	NA	NA	NA	rs2052937	0.71	0.71	0.697	0.663339	0.6938	0.6687	0.7133	0.6974	0.545	0.7	0.74	0.69	0.68	0.6759	0.74	1	T	0.066	B	0.007	B	.	.	1.000	P	-1.39	N	3.25	T	-0.966	T	0.000	T	0.065	-1.297	0.038	3.47	0.478	0.581	6.858	-1.297136	NA	0.42	0.696744	0.67635	NA	0.507	NA	6.2668894
1025	1	115260643	115260643	C	T	UTR3	CSDE1	NM_001130523:c.*147G>A,NM_001242891:c.*147G>A,NM_007158:c.*147G>A,NM_001007553:c.*147G>A,NM_001242892:c.*147G>A,NM_001242893:c.*147G>A	NA	NA	UTR3	ENSG00000009307	ENST00000339438:c.*147G>A,ENST00000438362:c.*147G>A,ENST00000358528:c.*147G>A,ENST00000261443:c.*147G>A,ENST00000530886:c.*147G>A,ENST00000369530:c.*147G>A,ENST00000534699:c.*147G>A	NA	NA	Score=822;Name=lod=2927	NA	1p13.2	Score=870;Name=V$FAC1_01	NA	NA	NA	rs6851	0.04	0.04	0.03	0.0353435	0.0666	0.0159	0.0533	0.0076	0.0481	0.06	0.02	0.07	0.02	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.967812	2.967812	NA	NA	NA	NA	0.029	NA	6.2667334
1025	11	118221349	118221349	T	C	exonic	CD3G	NA	synonymous SNV	CD3G:NM_000073:exon4:c.T390C:p.A130A	exonic	ENSG00000160654	NA	synonymous SNV	ENSG00000160654:ENST00000532917:exon4:c.T390C:p.A130A	Score=414;Name=lod=64	NA	11q23.3	NA	NA	NA	NA	rs3753059	0.21	0.21	NA	0.296326	0.1789	0.5119	0.1095	0.1611	0.5102	0.14	0.45	0.11	0.1	0.2189	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.589101	1.589101	NA	0.002444	0.002727	NA	NA	NA	6.2664226
1025	6	46623698	46623698	T	C	exonic	SLC25A27	NA	synonymous SNV	SLC25A27:NM_001204051:exon2:c.T225C:p.A75A,SLC25A27:NM_001204052:exon2:c.T225C:p.A75A,SLC25A27:NM_004277:exon2:c.T225C:p.A75A	exonic	ENSG00000153291	NA	synonymous SNV	ENSG00000153291:ENST00000371347:exon2:c.T225C:p.A75A,ENSG00000153291:ENST00000411689:exon2:c.T225C:p.A75A	Score=456;Name=lod=95	NA	6p12.3	NA	Name=YY1_(C-20),CTCF_(SC-5916),CTCFL_(SC-98982),CTCF,Rad21	Name=18	NA	rs3757241	0.86	0.86	0.848	0.885383	0.7575	0.9097	0.8631	0.9705	0.8926	0.76	0.9	0.86	0.97	0.8319	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.577496	1.577496	NA	0.811135	0.951766	NA	0.935	NA	6.2661316
1025	14	45711594	45711594	T	C	exonic	MIS18BP1	NA	synonymous SNV	MIS18BP1:NM_018353:exon4:c.A786G:p.K262K	exonic	ENSG00000129534	NA	synonymous SNV	ENSG00000129534:ENST00000453142:exon1:c.A90G:p.K30K,ENSG00000129534:ENST00000310806:exon4:c.A786G:p.K262K,ENSG00000129534:ENST00000454990:exon4:c.A786G:p.K262K	NA	NA	14q21.2	NA	NA	Name=10	NA	rs1266209	0.26	0.26	0.278	0.288339	0.1243	0.1389	0.1916	0.6528	0.1871	0.14	0.14	0.18	0.65	0.1669	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.237212	NA	NA	0.109419	0.528383	NA	0.232	NA	6.2660476
1025	4	39975758	39975758	C	T	intronic	PDS5A	NA	NA	NA	ncRNA_intronic	ENSG00000231707	NA	NA	NA	Score=541;Name=lod=211	NA	4p14	NA	NA	Name=4	NA	rs62309249	0.03	0.03	0.039	0.0229633	0.0676	0.001	0.049	0.0015	0.0102	0.07	NA	0.05	NA	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3139	NA	NA	NA	NA	NA	0.014	NA	6.2657333
1025	7	133979795	133979795	T	C	exonic	SLC35B4	NA	synonymous SNV	SLC35B4:NM_032826:exon10:c.A786G:p.T262T	exonic	ENSG00000205060	NA	synonymous SNV	ENSG00000205060:ENST00000378509:exon10:c.A786G:p.T262T	Score=538;Name=lod=204	NA	7q33	Score=830;Name=V$GR_Q6	NA	NA	NA	rs1421484	0.46	0.46	0.44	0.492612	0.4652	0.2708	0.5793	0.5953	0.5491	0.47	0.27	0.55	0.59	0.476	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.431531	NA	NA	0.460233	0.602587	NA	0.435	NA	6.2652336
1025	7	124387092	124387092	C	G	exonic	GPR37	NA	synonymous SNV	GPR37:NM_005302:exon2:c.G1329C:p.L443L	exonic	ENSG00000170775	NA	synonymous SNV	ENSG00000170775:ENST00000303921:exon2:c.G1329C:p.L443L	Score=558;Name=lod=248	NA	7q31.33	Score=733;Name=V$PAX4_04	NA	NA	NA	rs3735270	0.41	0.41	0.404	0.396765	0.4632	0.5367	0.4409	0.18	0.4458	0.46	0.53	0.42	0.21	0.4541	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.056659	NA	NA	0.484302	0.238992	ID=COSM1131723;OCCURENCE=1(prostate)	0.362	NA	6.2650646
1026	20	46279827	46279827	G	A	exonic	NCOA3	NA	synonymous SNV	NCOA3:NM_001174087:exon20:c.G3750A:p.Q1250Q,NCOA3:NM_001174088:exon20:c.G3726A:p.Q1242Q,NCOA3:NM_006534:exon20:c.G3741A:p.Q1247Q,NCOA3:NM_181659:exon20:c.G3753A:p.Q1251Q	exonic	ENSG00000124151	NA	synonymous SNV	ENSG00000124151:ENST00000341724:exon19:c.G3531A:p.Q1177Q,ENSG00000124151:ENST00000371997:exon20:c.G3726A:p.Q1242Q,ENSG00000124151:ENST00000371998:exon20:c.G3753A:p.Q1251Q,ENSG00000124151:ENST00000372004:exon20:c.G3741A:p.Q1247Q	Score=592;Name=lod=338	NA	20q13.12	NA	NA	NA	NA	rs6018623	0.16	0.16	0.193	0.17492	0.1928	0.1617	0.1571	0.1906	0.1616	0.18	0.13	0.12	0.2	0.0977	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.284378	NA	NA	0.111512	0.192919	NA	0.08	NA	6.2646546
1026	22	42159229	42159229	G	T	exonic	MEI1	NA	synonymous SNV	MEI1:NM_152513:exon19:c.G2172T:p.S724S	exonic	ENSG00000167077	NA	synonymous SNV	ENSG00000167077:ENST00000540880:exon3:c.G126T:p.S42S,ENSG00000167077:ENST00000400107:exon19:c.G276T:p.S92S,ENSG00000167077:ENST00000401548:exon19:c.G2172T:p.S724S,ENSG00000167077:ENST00000540833:exon19:c.G1392T:p.S464S	Score=469;Name=lod=107	NA	22q13.2	NA	Name=CTCFL_(SC-98982),YY1_(C-20),SMC3_(ab9263),Rad21,CTCF,KAP1,ZNF263,CTCF_(SC-5916),CTCF_(C-20)	Name=55	NA	rs2050033	0.84	0.84	0.884	0.841254	0.8032	0.9355	0.5893	0.9796	0.7751	0.81	0.94	0.58	0.97	0.7858	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.969538	NA	NA	0.813178	0.952002	NA	0.862	NA	6.2644886
1026	7	157414064	157414064	G	A	exonic	PTPRN2	NA	synonymous SNV	PTPRN2:NM_130842:exon14:c.C2283T:p.A761A,PTPRN2:NM_130843:exon14:c.C2247T:p.A749A,PTPRN2:NM_002847:exon15:c.C2334T:p.A778A	exonic	ENSG00000155093	NA	synonymous SNV	ENSG00000155093:ENST00000389413:exon14:c.C2247T:p.A749A,ENSG00000155093:ENST00000389416:exon14:c.C2283T:p.A761A,ENSG00000155093:ENST00000409483:exon14:c.C2220T:p.A740A,ENSG00000155093:ENST00000389418:exon15:c.C2334T:p.A778A,ENSG00000155093:ENST00000404321:exon15:c.C2403T:p.A801A	NA	NA	7q36.3	NA	Name=GR,ERalpha_a	Name=9	NA	rs1130502	0.47	0.47	0.471	0.452676	0.4791	0.3571	0.4539	0.6596	0.2434	0.47	0.33	0.46	0.65	0.4331	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.942496	NA	NA	0.490233	0.655697	NA	0.652	NA	6.2642336
1026	11	48238880	48238880	C	T	exonic	OR4B1	NA	synonymous SNV	OR4B1:NM_001005470:exon1:c.C519T:p.D173D	exonic	ENSG00000175619	NA	synonymous SNV	ENSG00000175619:ENST00000309562:exon1:c.C519T:p.D173D	Score=433;Name=lod=77	NA	11p11.2	NA	NA	NA	NA	rs10838833	0.16	0.16	0.16	0.172724	0.1233	0.1637	0.121	0.2859	0.1166	0.12	0.16	0.11	0.26	0.1463	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.187105	NA	NA	0.132852	0.266697	NA	0.174	NA	6.2642146
1026	1	218458551	218458551	T	C	upstream	RRP15	NA	NA	NA	upstream	ENSG00000067533	NA	NA	NA	NA	NA	1q41	Score=781;Name=V$PAX5_02	Name=Pol2,PU.1,RFX5_(N-494),NRSF,SP1,Pol2(phosphoS2),STAT3,YY1,NANOG_(SC-33759),TCF4,SMC3_(ab9263),YY1_(C-20),Sin3Ak-20,BRCA1_(C-1863),BCLAF1_(M33-P5B11),GATA3_(SC-268),Pol2-4H8,Pol2(b),TAF1,eGFP-JunB,JunD,FOSL2,E2F6_(H-50),Znf143_(16618-1-AP),FOXA1_(C-20),POU2F2,ELK4,GABP,USF2,p300,USF-1,TBP,IRF1,GTF2F1_(RAP-74),Max,STAT1,c-Myc,ELF1_(SC-631),FOXA1_(SC-101058),ZEB1_(SC-25388),HEY1,NFKB,PAX5-C20,PAX5-N19,SETDB1,SRF,Oct-2,SIX5	Name=148	NA	rs946213	0.42	0.42	0.416	0.466853	0.4026	0.377	0.3242	0.6952	0.4182	0.41	0.32	0.32	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.01639	NA	NA	NA	NA	NA	0.471	NA	6.2640666
1026	19	45001346	45001346	G	A	exonic	ZNF180	NA	nonsynonymous SNV	ZNF180:NM_013256:exon2:c.C122T:p.A41V	exonic	ENSG00000167384	NA	nonsynonymous SNV	ENSG00000167384:ENST00000221327:exon2:c.C122T:p.A41V,ENSG00000167384:ENST00000391956:exon2:c.C122T:p.A41V,ENSG00000167384:ENST00000586637:exon2:c.C28T:p.P10S,ENSG00000167384:ENST00000587047:exon2:c.C127T:p.P43S,ENSG00000167384:ENST00000590088:exon2:c.C127T:p.P43S,ENSG00000167384:ENST00000591064:exon2:c.C41T:p.A14V,ENSG00000167384:ENST00000592095:exon2:c.C41T:p.A14V,ENSG00000167384:ENST00000592529:exon2:c.C41T:p.A14V	NA	NA	19q13.31	NA	NA	NA	NA	rs2571108	0.3	0.3	0.304	0.260982	0.3857	0.3562	0.1844	0.1498	0.2393	0.4	0.39	0.2	0.14	0.3291	0.4	1	T	0.006	B	0.005	B	.	.	1.000	P	-0.345	N	3.21	T	-0.921	T	0.000	T	0.035	1.216	9.934	0.423	0.219	0.391	4.382	1.215647	NA	0.34	0.355465	0.200635	ID=COSM1394477;OCCURENCE=1(large_intestine)	0.333	NA	6.2630684
1026	1	148009510	148009510	G	A	exonic	NBPF14	NA	synonymous SNV	NBPF14:NM_015383:exon16:c.C1797T:p.S599S	exonic	ENSG00000122497	NA	synonymous SNV	ENSG00000122497:ENST00000369219:exon16:c.C1797T:p.S599S	NA	NA	1q21.2	NA	NA	Name=5	NA	rs1127394	NA	NA	NA	0.0115815	0.001	0.0506	0.0043	0.0015	0.001	NA	NA	NA	NA	0.4028	0.087	.	.	.	.	.	.	.	.	1.000	N	.	.	.	.	-1.003	T	0.035	T	.	-0.394	2.154	.	.	0.748	.	-0.393869	NA	NA	NA	NA	ID=COSM146597;OCCURENCE=1(stomach)	0.116	NA	6.2628666
1026	4	123664204	123664204	G	A	exonic	BBS12	NA	nonsynonymous SNV	BBS12:NM_152618:exon2:c.G1157A:p.R386Q,BBS12:NM_001178007:exon3:c.G1157A:p.R386Q	exonic	ENSG00000181004	NA	nonsynonymous SNV	ENSG00000181004:ENST00000314218:exon2:c.G1157A:p.R386Q,ENSG00000181004:ENST00000542236:exon3:c.G1157A:p.R386Q	NA	NA	4q27	NA	NA	NA	NA	rs309370	0.48	0.48	0.462	0.50639	0.3191	0.6597	0.4726	0.584	0.4601	0.32	0.63	0.46	0.55	0.414	0.63	0.59	T	0.003	B	0.002	B	0.556	N	1.000	P	0.345	N	-1.22	T	-0.952	T	0.000	T	0.047	-0.185	3.101	0.337	0.085	-0.101	2.204	-0.18469	NA	0.6	0.337558	0.562642	NA	0.362	NA	6.2626754
1026	16	53504721	53504721	T	C	exonic	RBL2	NA	synonymous SNV	RBL2:NM_005611:exon17:c.T2590C:p.L864L	exonic	ENSG00000103479	NA	synonymous SNV	ENSG00000103479:ENST00000262133:exon17:c.T2590C:p.L864L	Score=710;Name=lod=1028	NA	16q12.2	Score=924;Name=V$NFAT_Q6	NA	NA	NA	rs10748	0.46	0.46	0.475	0.503994	0.4662	0.1786	0.4049	0.8464	0.4857	0.45	0.15	0.45	0.82	0.4528	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.337277	NA	NA	0.485698	0.768198	NA	0.63	NA	6.2619686
1026	5	141391532	141391532	G	A	exonic	GNPDA1	NA	synonymous SNV	GNPDA1:NM_005471:exon2:c.C69T:p.R23R	exonic	ENSG00000113552	NA	synonymous SNV	ENSG00000113552:ENST00000508177:exon1:c.C69T:p.R23R,ENSG00000113552:ENST00000311337:exon2:c.C69T:p.R23R,ENSG00000113552:ENST00000458112:exon2:c.C69T:p.R23R,ENSG00000113552:ENST00000504139:exon2:c.C69T:p.R23R,ENSG00000113552:ENST00000505689:exon2:c.C69T:p.R23R,ENSG00000113552:ENST00000510194:exon2:c.C69T:p.R23R,ENSG00000113552:ENST00000513454:exon2:c.C69T:p.R23R,ENSG00000113552:ENST00000542860:exon2:c.C69T:p.R23R,ENSG00000113552:ENST00000500692:exon3:c.C69T:p.R23R,ENSG00000113552:ENST00000503229:exon3:c.C69T:p.R23R,ENSG00000113552:ENST00000503794:exon3:c.C69T:p.R23R,ENSG00000113552:ENST00000504424:exon3:c.C69T:p.R23R	Score=531;Name=lod=191	NA	5q31.3	NA	Name=ZNF263,Egr-1	NA	NA	rs164080	0.56	0.56	0.563	0.544728	0.4612	0.625	0.4352	0.671	0.455	0.45	0.65	0.5	0.68	0.4871	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.752941	1.752941	NA	0.456628	0.628915	ID=COSM149957;OCCURENCE=1(stomach)	0.486	NA	6.2617386
1026	1	32221913	32221913	G	A	exonic	BAI2	NA	synonymous SNV	BAI2:NM_001703:exon4:c.C525T:p.P175P	exonic	ENSG00000121753	NA	synonymous SNV	ENSG00000121753:ENST00000398538:exon1:c.C489T:p.P163P,ENSG00000121753:ENST00000420125:exon1:c.C504T:p.P168P,ENSG00000121753:ENST00000398542:exon2:c.C489T:p.P163P,ENSG00000121753:ENST00000398547:exon2:c.C489T:p.P163P,ENSG00000121753:ENST00000398556:exon2:c.C534T:p.P178P,ENSG00000121753:ENST00000527361:exon2:c.C525T:p.P175P,ENSG00000121753:ENST00000533175:exon2:c.C627T:p.P209P,ENSG00000121753:ENST00000257070:exon4:c.C525T:p.P175P,ENSG00000121753:ENST00000373655:exon4:c.C525T:p.P175P,ENSG00000121753:ENST00000373658:exon4:c.C525T:p.P175P	NA	NA	1p35.2	NA	NA	Name=5	NA	rs4949223	0.1	0.1	0.084	0.136382	0.1133	0.1121	0.1715	0.0333	0.2996	0.12	0.1	0.17	0.03	0.1632	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.099533	NA	NA	0.128432	0.045847	NA	0.08	NA	6.2617346
1026	1	89426902	89426902	G	A	exonic	CCBL2	NA	synonymous SNV	CCBL2:NM_001008662:exon7:c.C633T:p.S211S,CCBL2:NM_001008661:exon8:c.C735T:p.S245S	exonic	ENSG00000137944	NA	synonymous SNV	ENSG00000137944:ENST00000370491:exon7:c.C633T:p.S211S,ENSG00000137944:ENST00000260508:exon8:c.C735T:p.S245S,ENSG00000137944:ENST00000370486:exon9:c.C735T:p.S245S	Score=607;Name=lod=389	NA	1p22.2	NA	Name=MafK_(ab50322)	NA	NA	rs3738055	0.42	0.42	0.404	0.369409	0.4771	0.4633	0.5043	0.2307	0.2536	0.45	0.48	0.46	0.28	0.4373	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.128962	NA	NA	0.490698	0.285293	ID=COSM146554;OCCURENCE=1(stomach)	0.464	NA	6.2615686
1026	17	27286750	27286750	G	A	exonic	SEZ6	NA	synonymous SNV	SEZ6:NM_001098635:exon8:c.C1737T:p.D579D,SEZ6:NM_178860:exon8:c.C1737T:p.D579D	exonic	ENSG00000063015	NA	synonymous SNV	ENSG00000063015:ENST00000540632:exon7:c.C1515T:p.D505D,ENSG00000063015:ENST00000317338:exon8:c.C1737T:p.D579D,ENSG00000063015:ENST00000360295:exon8:c.C1737T:p.D579D,ENSG00000063015:ENST00000442608:exon8:c.C1737T:p.D579D	Score=514;Name=lod=164	NA	17q11.2	NA	NA	NA	NA	rs9907950	0.15	0.15	0.148	0.141573	0.1402	0.0506	0.1268	0.2632	0.0828	0.12	0.07	0.16	0.27	0.1288	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.421934	2.421934	NA	0.137127	0.226676	NA	0.174	NA	6.2605396
1026	2	33447202	33447202	C	T	exonic	LTBP1	NA	synonymous SNV	LTBP1:NM_000627:exon5:c.C882T:p.N294N,LTBP1:NM_001166264:exon5:c.C882T:p.N294N,LTBP1:NM_001166265:exon5:c.C882T:p.N294N,LTBP1:NM_001166266:exon5:c.C882T:p.N294N,LTBP1:NM_206943:exon9:c.C1860T:p.N620N	exonic	ENSG00000049323	NA	synonymous SNV	ENSG00000049323:ENST00000390003:exon5:c.C882T:p.N294N,ENSG00000049323:ENST00000402934:exon5:c.C882T:p.N294N,ENSG00000049323:ENST00000404525:exon5:c.C882T:p.N294N,ENSG00000049323:ENST00000407925:exon5:c.C882T:p.N294N,ENSG00000049323:ENST00000418533:exon5:c.C882T:p.N294N,ENSG00000049323:ENST00000354476:exon9:c.C1860T:p.N620N,ENSG00000049323:ENST00000404816:exon9:c.C1860T:p.N620N	Score=593;Name=lod=343	NA	2p22.3	Score=888;Name=V$FOXO4_02	NA	NA	NA	rs2290448	0.39	0.39	0.362	0.332668	0.4861	0.3323	0.4337	0.1936	0.2914	0.48	0.35	0.44	0.23	0.4312	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.82004	NA	NA	0.49	0.231276	NA	0.29	NA	6.2593666
1026	19	18496989	18496989	C	T	UTR5	GDF15	NM_004864:c.-11C>T	NA	NA	UTR5	ENSG00000130513	ENST00000597765:c.-11C>T,ENST00000595973:c.-11C>T,ENST00000252809:c.-11C>T	NA	NA	NA	NA	19p13.11	NA	Name=CTCF_(C-20),HEY1,TBP,IRF1,TCF12,GTF2B,FOXA1_(C-20),HNF4A_(H-171),TAL1_(SC-12984),FOSL2,Pol2(b),Sin3Ak-20,Pol2-4H8,HDAC2_(SC-6296),YY1,Ini1,HNF4G_(SC-6558),Max,FOXA2_(SC-6554),FOXA1_(SC-101058),Rad21,BAF155,CHD2_(N-1250),GTF2F1_(RAP-74),CEBPB,RXRA,CTCF,p300,E2F4,HMGN3,GABP,ETS1,TAF1,CTCFL_(SC-98982),TAF7_(SQ-8),YY1_(C-20),eGFP-JunD,E2F6,NRSF,NELFe,Pol2,HNF4A,SMC3_(ab9263),TCF4,Pol2(phosphoS2)	Name=142	NA	rs141542836	0.01	0.01	0.013	0.0181709	0.0268	0.0149	0.0375	0.0053	0.0164	0.02	0.01	0.03	0.002	0.024	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.163493	NA	NA	0.023372	0.005901	NA	NA	NA	6.2591614
1026	8	92169778	92169778	G	T	intronic	LRRC69	NA	NA	NA	ncRNA_exonic	ENSG00000253525	NA	NA	NA	Score=346;Name=lod=34	NA	8q21.3	NA	Name=GATA3_(SC-268)	NA	NA	rs61749013	0.04	0.04	0.025	0.0313498	0.0746	0.003	0.0432	0.0083	0.0389	0.07	0.0035	0.04	0.01	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.310658	NA	NA	NA	NA	NA	0.029	NA	6.2587333
1026	8	92170590	92170590	T	C	intronic	LRRC69	NA	NA	NA	ncRNA_exonic	ENSG00000253525	NA	NA	NA	Score=494;Name=lod=136	NA	8q21.3	NA	NA	Name=15	NA	rs35275465	0.04	0.04	0.029	0.0311502	0.0746	0.003	0.0432	0.0076	0.0389	0.07	0.0035	0.04	0.01	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.367682	NA	NA	NA	NA	NA	0.029	NA	6.2587333
1026	8	92170948	92170948	T	C	intronic	LRRC69	NA	NA	NA	ncRNA_exonic	ENSG00000253525	NA	NA	NA	Score=587;Name=lod=325	NA	8q21.3	NA	NA	Name=15	NA	rs35917953	0.04	0.04	0.03	0.0309505	0.0746	0.003	0.0418	0.0076	0.0389	0.07	0.0035	0.04	0.01	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.34572	NA	NA	NA	NA	NA	0.029	NA	6.2587333
1026	21	37858951	37858951	C	G	intronic	CLDN14	NA	NA	NA	ncRNA_exonic	ENSG00000223741	NA	NA	NA	Score=755;Name=lod=1555	NA	21q22.13	NA	NA	Name=2	NA	rs8132946	0.13	0.13	0.132	0.144968	0.0746	0.0218	0.1239	0.354	0.0767	0.07	0.02	0.13	0.37	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.525236	NA	NA	NA	NA	NA	0.174	NA	6.2587333
1026	21	40191638	40191638	A	G	exonic	ETS2	NA	synonymous SNV	ETS2:NM_005239:exon8:c.A1023G:p.P341P,ETS2:NM_001256295:exon9:c.A1443G:p.P481P	exonic	ENSG00000157557	NA	synonymous SNV	ENSG00000157557:ENST00000360938:exon8:c.A1023G:p.P341P,ENSG00000157557:ENST00000360214:exon9:c.A1023G:p.P341P	NA	NA	21q22.2	Score=894;Name=V$CEBPB_02	Name=c-Myc,GR	Name=95	NA	rs461155	0.64	0.64	0.623	0.580671	0.838	0.4563	0.5778	0.5613	0.4724	0.84	0.43	0.63	0.57	0.7228	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.85823	NA	NA	0.847907	0.61961	NA	0.638	NA	6.2579596
1026	1	185143721	185143721	A	G	exonic	SWT1	NA	nonsynonymous SNV	SWT1:NM_001105518:exon5:c.A442G:p.I148V,SWT1:NM_017673:exon5:c.A442G:p.I148V	exonic	ENSG00000116668	NA	nonsynonymous SNV	ENSG00000116668:ENST00000367500:exon5:c.A442G:p.I148V,ENSG00000116668:ENST00000367501:exon5:c.A442G:p.I148V,ENSG00000116668:ENST00000450350:exon5:c.A442G:p.I148V	NA	NA	1q25.3	NA	NA	NA	NA	rs10489579	0.42	0.42	0.425	0.434704	0.3439	0.2718	0.3487	0.6982	0.4008	0.34	0.33	0.33	0.71	0.3744	0.71	0.64	T	0.001	B	0.001	B	0.919	N	1.000	P	1.735	L	1.17	T	-0.924	T	0.000	T	0.125	-0.836	0.583	0.918	-0.149	0.566	1.757	-0.836082	NA	0.23	0.357093	0.635951	NA	0.5	NA	6.2579404
1026	11	64646034	64646034	G	C	UTR5	EHD1	NM_006795:c.-98C>G	NA	NA	UTR5	ENSG00000110047	ENST00000320631:c.-98C>G	NA	NA	NA	NA	11q13.1	NA	Name=IRF4_(M-17),MEF2A,TAF7_(SQ-8),YY1_(C-20),SMC3_(ab9263),TCF4,SP1,Pol2,NELFe,HMGN3,POU2F2,Znf143_(16618-1-AP),E2F6_(H-50),TAF1,GTF2F1_(RAP-74),CTCF,Oct-2,Rad21,STAT1,Pol2-4H8,ZNF263,Sin3Ak-20,HA-E2F1,YY1,Ini1,RFX5_(N-494),CTCF_(SC-5916),TAL1_(SC-12984),FOSL2,Pol2(b),IRF1,TBP,TCF12,Nrf1,GTF2B,CTCF_(C-20),PAX5-N19,PAX5-C20,NFKB,ZEB1_(SC-25388),BCL3,HEY1,c-Myc,CCNT2,ZBTB7A_(SC-34508)	Name=148	NA	rs12801172	0.18	0.18	0.16	0.167931	0.0755	0.4365	0.1009	0.093	0.135	0.07	0.45	0.11	0.12	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.894652	NA	NA	NA	NA	NA	0.109	NA	6.2578334
1026	1	76190439	76190439	T	C	UTR5	ACADM	NM_001127328:c.-34T>C,NM_000016:c.-34T>C	NA	NA	UTR5	ENSG00000117054	ENST00000370841:c.-34T>C,ENST00000526196:c.-34T>C,ENST00000526129:c.-34T>C,ENST00000370834:c.-34T>C,ENST00000532509:c.-34T>C	NA	NA	NA	NA	1p31.1	NA	Name=MEF2C_(SC-13268),Egr-1,Ini1,Pol2(phosphoS2),YY1,NANOG_(SC-33759),NRSF,SP1,Pol2,Pol2-4H8,E2F1,HDAC2_(SC-6296),MEF2A,ZNF263,TAF7_(SQ-8),YY1_(C-20),Sin3Ak-20,ETS1,Pol2(b),TAF1,GABP,HMGN3,POU2F2,HNF4A_(H-171),E2F4,RXRA,IRF1,GTF2F1_(RAP-74),TBP,HEY1,BCL3,FOXA2_(SC-6554),NFKB,ELF1_(SC-631),Max,Oct-2	Name=133	NA	rs59932454	0.04	0.04	0.036	0.0403355	0.0179	NA	0.0245	0.1225	0.0051	0.01	NA	0.03	0.13	0.0292	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.827936	NA	NA	0.029651	0.104403	NA	0.014	NA	6.2565824
1026	19	13414594	13414594	C	T	exonic	CACNA1A	NA	synonymous SNV	CACNA1A:NM_001127221:exon16:c.G2094A:p.T698T,CACNA1A:NM_001127222:exon16:c.G2091A:p.T697T	exonic	ENSG00000141837	NA	synonymous SNV	ENSG00000141837:ENST00000360228:exon16:c.G2091A:p.T697T,ENSG00000141837:ENST00000573710:exon16:c.G2094A:p.T698T	NA	NA	19p13.2	NA	NA	NA	NA	rs16016	0.17	0.17	0.153	0.185104	0.1203	0.2887	0.2205	0.0673	0.2791	0.11	0.28	0.24	0.08	0.1607	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.484607	NA	NA	0.129234	0.082453	NA	0.138	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116516.2;CLNDSDB=.;CLNDSDBID=.	6.2564326
1026	13	52603194	52603194	G	T	exonic	UTP14C	NA	nonsynonymous SNV	UTP14C:NM_021645:exon2:c.G254T:p.G85V	exonic	ENSG00000253797	NA	nonsynonymous SNV	ENSG00000253797:ENST00000521776:exon2:c.G254T:p.G85V	Score=495;Name=lod=137	NA	13q14.3	NA	NA	NA	NA	rs3742289	0.62	0.62	0.586	0.58127	0.7237	0.5952	0.6585	0.4584	0.5317	0.71	0.58	0.69	0.45	0.6478	0.71	0.4	T	0.0	B	0.0	B	0.321	N	0.000	P	-1.26	N	2.32	T	-1.048	T	0.000	T	0.114	0.405	6.201	0.050	-0.133	0.238	3.868	0.405261	NA	0.34	0.706744	0.488652	NA	0.594	NA	6.2550894
1027	16	71712786	71712786	A	G	exonic	PHLPP2	NA	synonymous SNV	PHLPP2:NM_015020:exon7:c.T1140C:p.F380F	exonic	ENSG00000040199	NA	synonymous SNV	ENSG00000040199:ENST00000568004:exon3:c.T354C:p.F118F,ENSG00000040199:ENST00000356272:exon7:c.T1140C:p.F380F,ENSG00000040199:ENST00000360429:exon7:c.T1140C:p.F380F,ENSG00000040199:ENST00000393524:exon7:c.T1140C:p.F380F,ENSG00000040199:ENST00000567016:exon8:c.T1245C:p.F415F,ENSG00000040199:ENST00000568954:exon8:c.T1140C:p.F380F	Score=570;Name=lod=277	NA	16q22.2	NA	NA	NA	NA	rs61733126	0.12	0.12	0.119	0.160543	0.1302	0.1766	0.0994	0.0121	0.4192	0.13	0.19	0.12	0.02	0.1595	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.178018	NA	NA	0.122326	0.025478	NA	0.101	NA	6.2546406
1027	1	207110936	207110936	T	C	exonic	PIGR	NA	synonymous SNV	PIGR:NM_002644:exon4:c.A549G:p.V183V	exonic	ENSG00000162896	NA	synonymous SNV	ENSG00000162896:ENST00000356495:exon4:c.A549G:p.V183V	NA	NA	1q32.1	NA	Name=PU.1	Name=3	NA	rs291096	0.57	0.57	0.599	0.550919	0.4682	0.4474	0.5115	0.9319	0.2556	0.45	0.41	0.56	0.92	0.477	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.260777	NA	NA	0.467674	0.848616	NA	0.71	NA	6.2537926
1027	2	166535918	166535918	C	T	exonic	CSRNP3	NA	synonymous SNV	CSRNP3:NM_024969:exon5:c.C1413T:p.T471T,CSRNP3:NM_001172173:exon7:c.C1413T:p.T471T	exonic	ENSG00000178662	NA	synonymous SNV	ENSG00000178662:ENST00000342316:exon5:c.C1413T:p.T471T,ENSG00000178662:ENST00000409420:exon5:c.C1509T:p.T503T,ENSG00000178662:ENST00000314499:exon7:c.C1413T:p.T471T	Score=559;Name=lod=249	NA	2q24.3	Score=873;Name=V$HLF_01	NA	NA	NA	rs777346	0.41	0.41	0.365	0.369209	0.496	0.372	0.3098	0.3434	0.3129	0.5	0.38	0.36	0.35	0.4297	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.248506	NA	NA	0.487326	0.374489	NA	0.355	NA	6.2536406
1027	1	109394978	109394978	G	A	exonic	AKNAD1	NA	synonymous SNV	AKNAD1:NM_152763:exon2:c.C309T:p.D103D	exonic	ENSG00000162641	NA	synonymous SNV	ENSG00000162641:ENST00000369994:exon1:c.C309T:p.D103D,ENSG00000162641:ENST00000369995:exon2:c.C309T:p.D103D,ENSG00000162641:ENST00000370001:exon2:c.C309T:p.D103D,ENSG00000162641:ENST00000461774:exon2:c.C309T:p.D103D,ENSG00000162641:ENST00000472781:exon2:c.C309T:p.D103D,ENSG00000162641:ENST00000474186:exon3:c.C309T:p.D103D	NA	NA	1p13.3	NA	NA	Name=40	NA	rs17563390	0.14	0.14	0.141	0.125	0.1402	0.1369	0.1095	0.1528	0.0706	0.16	0.15	0.1	0.15	0.1308	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.149708	NA	NA	0.142442	0.153654	NA	0.116	NA	6.2532246
1027	2	241405528	241405528	A	G	exonic	GPC1	NA	nonsynonymous SNV	GPC1:NM_002081:exon9:c.A1498G:p.S500G	exonic	ENSG00000063660	NA	nonsynonymous SNV	ENSG00000063660:ENST00000264039:exon9:c.A1498G:p.S500G	NA	NA	2q37.3	NA	NA	NA	NA	rs2228331	0.64	0.64	0.658	0.664337	0.7048	0.3383	0.6484	0.9244	0.6186	0.69	0.33	0.68	0.91	0.6642	0.91	1	T	0.0	B	0.0	B	.	.	1.000	P	-1.145	N	0.83	T	-0.972	T	0.000	T	0.333	-2.325	0.004	1.97	-0.045	1.350	7.969	-2.325179	NA	0.59	0.71191	0.893327	NA	0.674	NA	6.2524234
1027	2	113956371	113956371	G	C	exonic	PSD4	NA	synonymous SNV	PSD4:NM_012455:exon15:c.G2679C:p.T893T	exonic	ENSG00000125637	NA	synonymous SNV	ENSG00000125637:ENST00000245796:exon15:c.G2679C:p.T893T,ENSG00000125637:ENST00000441564:exon15:c.G2592C:p.T864T	NA	NA	2q13	NA	Name=ZNF263	Name=20	NA	rs2276561	0.46	0.46	0.434	0.441494	0.4692	0.6498	0.5288	0.1838	0.4847	0.47	0.63	0.49	0.2	0.4869	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.402904	NA	NA	0.458264	0.214912	NA	0.413	NA	6.2523026
1027	20	3624848	3624848	C	T	exonic	ATRN	NA	synonymous SNV	ATRN:NM_139321:exon28:c.C4098T:p.A1366A	exonic	ENSG00000088812	NA	synonymous SNV	ENSG00000088812:ENST00000262919:exon28:c.C4098T:p.A1366A	Score=561;Name=lod=255	NA	20p13	NA	NA	NA	NA	rs34398666	0.08	0.08	0.074	0.0557109	0.169	NA	0.1037	0.0136	0.0194	0.17	NA	0.09	0.01	0.1004	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.585012	1.585012	NA	0.145465	0.036087	NA	0.196	NA	6.2518016
1027	19	33617583	33617583	C	T	exonic	GPATCH1	NA	synonymous SNV	GPATCH1:NM_018025:exon19:c.C2709T:p.S903S	exonic	ENSG00000076650	NA	synonymous SNV	ENSG00000076650:ENST00000170564:exon19:c.C2709T:p.S903S	Score=366;Name=lod=41	NA	19q13.11	NA	NA	NA	NA	rs6510356	0.19	0.19	0.209	0.259185	0.1163	0.1716	0.134	0.4387	0.3425	0.12	0.13	0.14	0.42	0.1817	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.64748	NA	NA	0.117209	0.4133	NA	0.203	NA	6.2514576
1027	11	36472800	36472800	A	G	exonic	PRR5L	NA	synonymous SNV	PRR5L:NM_001160168:exon5:c.A243G:p.Q81Q,PRR5L:NM_001160167:exon8:c.A627G:p.Q209Q,PRR5L:NM_024841:exon9:c.A627G:p.Q209Q	exonic	ENSG00000135362	NA	synonymous SNV	ENSG00000135362:ENST00000311599:exon8:c.A408G:p.Q136Q,ENSG00000135362:ENST00000530639:exon8:c.A627G:p.Q209Q,ENSG00000135362:ENST00000378867:exon9:c.A627G:p.Q209Q	Score=511;Name=lod=159	NA	11p12	NA	NA	NA	NA	rs3740958	0.18	0.18	0.187	0.204673	0.1282	0.377	0.111	0.1679	0.2219	0.13	0.34	0.1	0.16	0.1579	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.179865	NA	NA	0.129246	0.163488	NA	0.123	NA	6.2513206
1027	9	74360209	74360209	G	C	exonic	TMEM2	NA	synonymous SNV	TMEM2:NM_001135820:exon4:c.C759G:p.P253P,TMEM2:NM_013390:exon4:c.C759G:p.P253P	exonic	ENSG00000135048	NA	synonymous SNV	ENSG00000135048:ENST00000377044:exon4:c.C759G:p.P253P,ENSG00000135048:ENST00000377066:exon4:c.C759G:p.P253P,ENSG00000135048:ENST00000542935:exon4:c.C759G:p.P253P	NA	NA	9q21.13	Score=981;Name=V$P53_02	NA	NA	NA	rs3739783	0.12	0.12	0.1	0.125599	0.1421	0.1577	0.2046	0.0348	0.1421	0.14	0.16	0.14	0.04	0.1411	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.690823	NA	NA	0.132558	0.047208	ID=COSM150616;OCCURENCE=1(stomach)	0.138	NA	6.2509086
1027	7	21824122	21824122	G	A	exonic	DNAH11	NA	synonymous SNV	DNAH11:NM_001277115:exon58:c.G9561A:p.L3187L	exonic	ENSG00000105877	NA	synonymous SNV	ENSG00000105877:ENST00000409508:exon58:c.G9561A:p.L3187L,ENSG00000105877:ENST00000328843:exon59:c.G9582A:p.L3194L	Score=403;Name=lod=58	NA	7p15.3	NA	NA	NA	NA	rs6965750	0.12	0.12	0.118	0.129193	0.1392	0.0615	0.072	0.2277	0.0961	0.15	0.05	0.07	0.19	0.1341	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.020001	NA	NA	0.142737	0.177115	NA	0.167	NA	6.2506296
1027	2	136562472	136562472	G	A	exonic	LCT	NA	synonymous SNV	LCT:NM_002299:exon10:c.C4329T:p.G1443G	exonic	ENSG00000115850	NA	synonymous SNV	ENSG00000115850:ENST00000452974:exon4:c.C2625T:p.G875G,ENSG00000115850:ENST00000264162:exon10:c.C4329T:p.G1443G	NA	NA	2q21.3	Score=942;Name=V$P53_02	NA	NA	NA	rs3739022	0.2	0.2	0.213	0.243211	0.1501	0.2153	0.2839	0.2239	0.365	0.14	0.21	0.23	0.24	0.1686	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.652362	NA	NA	0.097442	0.20926	NA	0.181	NA	6.2505246
1027	5	113698544	113698544	G	C	exonic	KCNN2	NA	synonymous SNV	KCNN2:NM_021614:exon1:c.G72C:p.L24L	exonic	ENSG00000080709	NA	synonymous SNV	ENSG00000080709:ENST00000264773:exon1:c.G72C:p.L24L,ENSG00000080709:ENST00000512097:exon2:c.G72C:p.L24L	Score=869;Name=lod=4513	NA	5q22.3	Score=908;Name=V$ELK1_02	NA	NA	NA	rs40179	0.55	0.55	0.486	0.539736	0.4602	0.8512	0.5346	0.3396	0.5746	0.47	0.88	0.51	0.34	0.511	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.992624	NA	NA	0.445389	0.37483	NA	0.341	NA	6.2500776
1027	22	45767369	45767369	A	G	exonic	SMC1B	NA	synonymous SNV	SMC1B:NM_148674:exon14:c.T2295C:p.F765F	exonic	ENSG00000077935	NA	synonymous SNV	ENSG00000077935:ENST00000357450:exon14:c.T2295C:p.F765F,ENSG00000077935:ENST00000404354:exon14:c.T2295C:p.F765F	Score=300;Name=lod=22	NA	22q13.31	NA	NA	NA	NA	rs470062	0.13	0.13	0.119	0.166933	0.1332	0.1746	0.1427	0.1309	0.2597	0.13	0.14	0.15	0.12	0.1575	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.234371	NA	NA	0.12592	0.131071	NA	0.268	NA	6.2500466
1027	8	125463083	125463083	G	T	UTR5	TRMT12	NM_017956:c.-86G>T	NA	NA	UTR5	ENSG00000183665	ENST00000328599:c.-86G>T	NA	NA	NA	NA	8q24.13	NA	Name=p300,Oct-2,ELF1_(SC-631),Max,TR4,TAF7_(SQ-8),BRCA1_(C-1863),YY1_(C-20),Pol2(phosphoS2),SP1,PU.1,Pol2,GABP,POU2F2,Znf143_(16618-1-AP),GATA-1,TAF1,TBP,Nrf1,THAP1_(SC-98174),SIX5,NFKB,HEY1,c-Myc,Pol2-4H8,YY1,ELK4	Name=146	NA	rs3812473	0.1	0.1	0.089	0.0930511	0.0835	0.1438	0.0461	0.1165	0.0521	0.08	0.13	0.06	0.15	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.609985	NA	NA	NA	NA	NA	0.072	NA	6.2498334
1027	18	21119777	21119777	G	A	exonic	NPC1	NA	synonymous SNV	NPC1:NM_000271:exon18:c.C2793T:p.N931N	exonic	ENSG00000141458	NA	synonymous SNV	ENSG00000141458:ENST00000412552:exon11:c.C1839T:p.N613N,ENSG00000141458:ENST00000269228:exon18:c.C2793T:p.N931N	Score=470;Name=lod=108	NA	18q11.2	NA	NA	NA	NA	rs1140458	0.5	0.5	0.469	0.484026	0.4573	0.6111	0.611	0.3646	0.4519	0.46	0.64	0.56	0.36	0.4902	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.334488	2.334488	NA	0.469767	0.38788	ID=COSM437978;OCCURENCE=1(breast)	0.5	CLINSIG=non-pathogenic|other;CLNDBN=Niemann-Pick_disease_type_C1|not_specified;CLNREVSTAT=single|mult;CLNACC=RCV000020228.2|RCV000078475.3;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet|.;CLNDSDBID=NBK1296:C3179455:257220:ORPHA646|.	6.2493996
1027	3	119133554	119133554	G	A	exonic	ARHGAP31	NA	synonymous SNV	ARHGAP31:NM_020754:exon12:c.G2778A:p.A926A	exonic	ENSG00000031081	NA	synonymous SNV	ENSG00000031081:ENST00000264245:exon12:c.G2778A:p.A926A	Score=597;Name=lod=356	NA	3q13.33	NA	NA	NA	NA	rs61740281	0.12	0.12	0.1	0.129792	0.1471	0.0863	0.1282	0.1263	0.1626	0.14	0.08	0.14	0.12	0.1369	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.312052	NA	NA	0.133285	0.113986	NA	0.08	NA	6.2493816
1027	11	69252000	69252000	G	A	intergenic	MYEOV,CCND1	dist=187246;dist=203873	NA	NA	intergenic	ENSG00000255980,ENSG00000255606	dist=7611;dist=1133	NA	NA	Score=343;Name=lod=33	NA	11q13.3	NA	Name=USF2,Mxi1_(bHLH),SMC3_(ab9263),GR,Max,CTCF,p300,CEBPB,AP-2alpha,FOXA1_(C-20),ERalpha_a,c-Myc,AP-2gamma	Name=56	NA	rs11263441	0.21	0.21	0.177	0.227636	0.0845	0.5228	0.2579	0.084	0.2434	0.08	0.5	0.21	0.09	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.597957	NA	NA	NA	NA	NA	0.123	NA	6.2488334
1027	9	33386526	33386526	G	A	exonic	AQP7	NA	synonymous SNV	AQP7:NM_001170:exon5:c.C282T:p.N94N	exonic	ENSG00000165269	NA	synonymous SNV	ENSG00000165269:ENST00000379503:exon2:c.C90T:p.N30N,ENSG00000165269:ENST00000439678:exon2:c.C6T:p.N2N,ENSG00000165269:ENST00000379506:exon3:c.C279T:p.N93N,ENSG00000165269:ENST00000379507:exon3:c.C279T:p.N93N,ENSG00000165269:ENST00000377425:exon4:c.C111T:p.N37N,ENSG00000165269:ENST00000537089:exon4:c.C6T:p.N2N,ENSG00000165269:ENST00000541274:exon4:c.C6T:p.N2N,ENSG00000165269:ENST00000297988:exon5:c.C282T:p.N94N,ENSG00000165269:ENST00000539936:exon5:c.C282T:p.N94N	NA	NA	9p13.3	Score=813;Name=V$PAX4_01	NA	NA	NA	rs79202054	NA	NA	0.31	0.000199681	NA	NA	NA	NA	0.001	NA	NA	NA	NA	0.4188	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.425966	NA	NA	NA	NA	NA	NA	NA	6.2478666
1027	1	21900171	21900171	A	G	exonic	ALPL	NA	synonymous SNV	ALPL:NM_001177520:exon7:c.A645G:p.P215P,ALPL:NM_001127501:exon8:c.A711G:p.P237P,ALPL:NM_000478:exon9:c.A876G:p.P292P	exonic	ENSG00000162551	NA	synonymous SNV	ENSG00000162551:ENST00000539907:exon7:c.A645G:p.P215P,ENSG00000162551:ENST00000425315:exon8:c.A876G:p.P292P,ENSG00000162551:ENST00000540617:exon8:c.A711G:p.P237P,ENSG00000162551:ENST00000374832:exon9:c.A876G:p.P292P,ENSG00000162551:ENST00000374840:exon9:c.A876G:p.P292P	NA	NA	1p36.12	Score=814;Name=V$ER_Q6	NA	NA	NA	rs3200255	0.28	0.28	0.254	0.271565	0.1252	0.4474	0.2709	0.2821	0.227	0.13	0.49	0.26	0.29	0.1803	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.177743	NA	NA	0.113372	0.25783	NA	0.167	NA	6.2477946
1027	2	219610433	219610433	A	G	exonic	TTLL4	NA	synonymous SNV	TTLL4:NM_014640:exon7:c.A1806G:p.E602E	exonic	ENSG00000135912	NA	synonymous SNV	ENSG00000135912:ENST00000258398:exon5:c.A1806G:p.E602E,ENSG00000135912:ENST00000457313:exon6:c.A1311G:p.E437E,ENSG00000135912:ENST00000392102:exon7:c.A1806G:p.E602E,ENSG00000135912:ENST00000442769:exon7:c.A1806G:p.E602E	Score=532;Name=lod=193	NA	2q35	Score=809;Name=V$OLF1_01	NA	NA	NA	rs586194	0.48	0.48	0.516	0.489217	0.4672	0.1409	0.438	0.9168	0.3292	0.47	0.16	0.43	0.92	0.4764	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.593953	NA	NA	0.475814	0.845665	NA	0.616	NA	6.2472526
1027	1	53250650	53250650	G	A	exonic	ZYG11B	NA	synonymous SNV	ZYG11B:NM_024646:exon5:c.G1194A:p.G398G	exonic	ENSG00000162378	NA	synonymous SNV	ENSG00000162378:ENST00000294353:exon5:c.G1194A:p.G398G,ENSG00000162378:ENST00000443756:exon5:c.G1194A:p.G398G,ENSG00000162378:ENST00000545132:exon5:c.G1194A:p.G398G	Score=618;Name=lod=435	NA	1p32.3	Score=671;Name=V$P53_01	NA	NA	NA	rs6588443	0.71	0.71	0.724	0.714856	0.4284	0.9792	0.6729	0.9077	0.5061	0.43	0.98	0.62	0.9	0.5462	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.237682	1.237682	NA	0.444884	0.825011	NA	0.739	NA	6.2471826
1027	13	78216915	78216915	C	T	exonic	SCEL	NA	synonymous SNV	SCEL:NM_001160706:exon30:c.C1896T:p.H632H,SCEL:NM_003843:exon31:c.C1962T:p.H654H,SCEL:NM_144777:exon32:c.C2022T:p.H674H	exonic	ENSG00000136155	NA	synonymous SNV	ENSG00000136155:ENST00000535157:exon30:c.C1896T:p.H632H,ENSG00000136155:ENST00000377246:exon31:c.C1962T:p.H654H,ENSG00000136155:ENST00000349847:exon32:c.C2022T:p.H674H	Score=548;Name=lod=226	NA	13q22.3	NA	NA	NA	NA	rs2813739	0.14	0.14	0.141	0.150759	0.1252	0.1409	0.1556	0.1626	0.1677	0.12	0.14	0.17	0.15	0.1501	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.80976	NA	NA	0.144253	0.170222	NA	0.196	NA	6.2471136
1027	16	68712730	68712730	C	A	exonic	CDH3	NA	synonymous SNV	CDH3:NM_001793:exon6:c.C612A:p.I204I	exonic	ENSG00000062038	NA	synonymous SNV	ENSG00000062038:ENST00000581171:exon5:c.C447A:p.I149I,ENSG00000062038:ENST00000264012:exon6:c.C612A:p.I204I,ENSG00000062038:ENST00000429102:exon6:c.C612A:p.I204I	NA	NA	16q22.1	Score=814;Name=V$PBX1_02	NA	NA	NA	rs8049247	0.14	0.14	0.159	0.139776	0.1471	0.002	0.0865	0.32	0.0685	0.14	NA	0.11	0.34	0.132	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.093349	NA	NA	0.141395	0.284804	NA	0.152	NA	6.2461716
1027	1	235392546	235392546	T	C	exonic	ARID4B	NA	synonymous SNV	ARID4B:NM_001206794:exon11:c.A897G:p.E299E,ARID4B:NM_016374:exon11:c.A897G:p.E299E,ARID4B:NM_031371:exon11:c.A897G:p.E299E	exonic	ENSG00000054267	NA	synonymous SNV	ENSG00000054267:ENST00000264183:exon11:c.A897G:p.E299E,ENSG00000054267:ENST00000349213:exon11:c.A897G:p.E299E,ENSG00000054267:ENST00000366603:exon11:c.A897G:p.E299E,ENSG00000054267:ENST00000418304:exon11:c.A897G:p.E299E,ENSG00000054267:ENST00000421364:exon11:c.A897G:p.E299E	Score=543;Name=lod=215	NA	1q42.3	NA	NA	Name=6	NA	rs12731746	0.43	0.43	0.408	0.448682	0.4791	0.251	0.5086	0.4342	0.5982	0.49	0.27	0.5	0.46	0.4783	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.294876	2.294876	NA	0.46314	0.467544	NA	0.536	NA	6.2461266
1027	18	706558	706558	C	T	exonic	ENOSF1	NA	synonymous SNV	ENOSF1:NM_017512:exon2:c.G105A:p.S35S,ENOSF1:NM_202758:exon2:c.G168A:p.S56S	exonic	ENSG00000132199	NA	synonymous SNV	ENSG00000132199:ENST00000251101:exon2:c.G105A:p.S35S,ENSG00000132199:ENST00000340116:exon2:c.G168A:p.S56S,ENSG00000132199:ENST00000539164:exon2:c.G105A:p.S35S,ENSG00000132199:ENST00000580982:exon2:c.G105A:p.S35S,ENSG00000132199:ENST00000581475:exon2:c.G105A:p.S35S,ENSG00000132199:ENST00000584453:exon2:c.G105A:p.S35S	NA	NA	18p11.32	NA	NA	Name=2	NA	rs58085394	0.13	0.13	0.131	0.102636	0.1581	0.2391	0.0778	0.0083	0.0501	0.15	0.22	0.1	0.01	0.1244	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.170513	NA	NA	0.13814	0.027463	NA	0.087	NA	6.2460266
1027	6	44982593	44982593	G	A	exonic	SUPT3H	NA	synonymous SNV	SUPT3H:NM_003599:exon5:c.C309T:p.I103I,SUPT3H:NM_181356:exon7:c.C342T:p.I114I	exonic	ENSG00000196284	NA	synonymous SNV	ENSG00000196284:ENST00000306867:exon4:c.C309T:p.I103I,ENSG00000196284:ENST00000371459:exon5:c.C309T:p.I103I,ENSG00000196284:ENST00000371461:exon5:c.C342T:p.I114I,ENSG00000196284:ENST00000475057:exon5:c.C309T:p.I103I,ENSG00000196284:ENST00000371460:exon7:c.C342T:p.I114I	Score=611;Name=lod=407	NA	6p21.1	NA	NA	NA	NA	rs12528232	0.16	0.16	0.123	0.142572	0.1282	0.252	0.255	0.0242	0.1247	0.13	0.28	0.23	0.03	0.1616	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.148739	NA	NA	0.131426	0.044959	NA	0.138	NA	6.2454406
1027	12	48527186	48527186	C	T	exonic	PFKM	NA	synonymous SNV	PFKM:NM_001166688:exon5:c.C516T:p.T172T,PFKM:NM_000289:exon6:c.C516T:p.T172T,PFKM:NM_001166687:exon6:c.C516T:p.T172T,PFKM:NM_001166686:exon8:c.C729T:p.T243T	exonic	ENSG00000152556	NA	synonymous SNV	ENSG00000152556:ENST00000547587:exon5:c.C516T:p.T172T,ENSG00000152556:ENST00000312352:exon6:c.C516T:p.T172T,ENSG00000152556:ENST00000359794:exon6:c.C516T:p.T172T,ENSG00000152556:ENST00000395233:exon6:c.C516T:p.T172T,ENSG00000152556:ENST00000551804:exon6:c.C516T:p.T172T,ENSG00000152556:ENST00000340802:exon8:c.C729T:p.T243T	Score=587;Name=lod=324	NA	12q13.11	NA	NA	NA	NA	rs1049392	0.19	0.19	0.207	0.187899	0.1382	0.1399	0.111	0.3396	0.138	0.14	0.17	0.1	0.34	0.1485	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.151352	NA	NA	0.134884	0.318883	NA	0.239	NA	6.2450826
1028	9	33386511	33386511	A	G	exonic	AQP7	NA	synonymous SNV	AQP7:NM_001170:exon5:c.T297C:p.F99F	exonic	ENSG00000165269	NA	synonymous SNV	ENSG00000165269:ENST00000379503:exon2:c.T105C:p.F35F,ENSG00000165269:ENST00000439678:exon2:c.T21C:p.F7F,ENSG00000165269:ENST00000379506:exon3:c.T294C:p.F98F,ENSG00000165269:ENST00000379507:exon3:c.T294C:p.F98F,ENSG00000165269:ENST00000377425:exon4:c.T126C:p.F42F,ENSG00000165269:ENST00000537089:exon4:c.T21C:p.F7F,ENSG00000165269:ENST00000541274:exon4:c.T21C:p.F7F,ENSG00000165269:ENST00000297988:exon5:c.T297C:p.F99F,ENSG00000165269:ENST00000539936:exon5:c.T297C:p.F99F	NA	NA	9p13.3	Score=722;Name=V$HOX13_01	NA	NA	NA	rs72707424	NA	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4223	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.19119	NA	NA	NA	NA	NA	NA	NA	6.2443666
1028	20	62737318	62737318	G	A	exonic	NPBWR2	NA	synonymous SNV	NPBWR2:NM_005286:exon1:c.C867T:p.P289P	exonic	ENSG00000125522	NA	synonymous SNV	ENSG00000125522:ENST00000369768:exon1:c.C867T:p.P289P	Score=429;Name=lod=74	NA	20q13.33	Score=969;Name=V$P53_02	NA	NA	NA	rs13036542	0.5	0.5	0.48	0.448682	0.4821	0.6091	0.5245	0.348	0.3313	0.48	0.6	0.54	0.37	0.4697	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.745494	NA	NA	0.470568	0.360808	NA	0.377	NA	6.2442986
1028	6	29691303	29691303	G	A	exonic	HLA-F	NA	synonymous SNV	HLA-F:NM_001098478:exon1:c.G63A:p.A21A,HLA-F:NM_001098479:exon1:c.G63A:p.A21A,HLA-F:NM_018950:exon1:c.G63A:p.A21A	exonic	ENSG00000204642	NA	synonymous SNV	ENSG00000204642:ENST00000259951:exon1:c.G63A:p.A21A,ENSG00000204642:ENST00000334668:exon1:c.G63A:p.A21A,ENSG00000204642:ENST00000414333:exon1:c.G63A:p.A21A,ENSG00000204642:ENST00000434407:exon1:c.G63A:p.A21A,ENSG00000204642:ENST00000376861:exon2:c.G63A:p.A21A	NA	NA	6p22.1	NA	Name=TAF1,POU2F2,YY1,Pol2,RFX5_(N-494),Pol2-4H8,Oct-2,CTCF,TBP	NA	NA	rs2076183	0.19	0.19	0.182	0.23103	0.1193	0.2917	0.1628	0.2632	0.2883	0.12	0.27	0.15	0.24	0.1783	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.919825	NA	NA	0.124815	0.232155	NA	0.232	NA	6.2442516
1028	4	89397091	89397091	A	G	exonic	HERC5	NA	nonsynonymous SNV	HERC5:NM_016323:exon12:c.A1492G:p.M498V	exonic	ENSG00000138646	NA	nonsynonymous SNV	ENSG00000138646:ENST00000508159:exon6:c.A406G:p.M136V,ENSG00000138646:ENST00000264350:exon12:c.A1492G:p.M498V	NA	NA	4q22.1	NA	NA	NA	NA	rs7699006	0.57	0.57	0.571	0.613019	0.335	0.8026	0.4914	0.8101	0.5235	0.33	0.78	0.44	0.79	0.4403	0.79	1	T	0.0	B	0.0	B	0.094	N	1.000	P	-1.15	N	1.45	T	-0.970	T	0.000	T	0.013	-1.496	0.017	-0.085	-0.162	-0.303	8.613	-1.495983	NA	1	0.31407	0.72946	NA	0.601	NA	6.2439634
1028	16	74366531	74366531	A	C	ncRNA_exonic	LOC283922	NA	NA	NA	ncRNA_exonic	ENSG00000214331	NA	NA	NA	Score=576;Name=lod=292	NA	16q23.1	Score=880;Name=V$OCT_C	NA	NA	NA	rs3743922	NA	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4232	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.893467	NA	NA	NA	NA	NA	NA	NA	6.2434666
1028	3	33434831	33434831	G	A	exonic	UBP1	NA	synonymous SNV	UBP1:NM_001128160:exon13:c.C1398T:p.T466T,UBP1:NM_014517:exon14:c.C1506T:p.T502T,UBP1:NM_001128161:exon15:c.C1506T:p.T502T	exonic	ENSG00000153560	NA	synonymous SNV	ENSG00000153560:ENST00000447368:exon13:c.C1398T:p.T466T,ENSG00000153560:ENST00000283629:exon14:c.C1506T:p.T502T,ENSG00000153560:ENST00000283628:exon15:c.C1506T:p.T502T	Score=596;Name=lod=352	NA	3p22.3	Score=772;Name=V$STAT5A_02	NA	NA	NA	rs2293250	0.53	0.53	0.511	0.540136	0.4732	0.6141	0.6326	0.5552	0.4468	0.49	0.55	0.6	0.54	0.5018	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.173387	NA	NA	0.448372	0.577167	NA	0.536	NA	6.2432946
1028	9	133911706	133911706	C	T	exonic	LAMC3	NA	synonymous SNV	LAMC3:NM_006059:exon4:c.C963T:p.A321A	exonic	ENSG00000050555	NA	synonymous SNV	ENSG00000050555:ENST00000361069:exon4:c.C963T:p.A321A	Score=476;Name=lod=115	NA	9q34.12	NA	NA	NA	NA	rs2275131	0.46	0.46	0.439	0.398363	0.4791	0.6647	0.4885	0.1641	0.2935	0.48	0.64	0.49	0.2	0.4558	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.373783	NA	NA	0.488573	0.216925	ID=COSM455480;OCCURENCE=1(breast)	0.355	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117484.2;CLNDSDB=.;CLNDSDBID=.	6.2431936
1028	12	6709059	6709059	G	A	exonic	CHD4	NA	synonymous SNV	CHD4:NM_001273:exon10:c.C1362T:p.V454V	exonic	ENSG00000111642	NA	synonymous SNV	ENSG00000111642:ENST00000309577:exon10:c.C1362T:p.V454V,ENSG00000111642:ENST00000357008:exon10:c.C1362T:p.V454V,ENSG00000111642:ENST00000544040:exon10:c.C1341T:p.V447V,ENSG00000111642:ENST00000544484:exon10:c.C1353T:p.V451V	Score=602;Name=lod=372	NA	12p13.31	NA	NA	NA	NA	rs11539542	0.09	0.09	0.089	0.0980431	0.1322	0.004	0.0634	0.1278	0.1442	0.13	0.0017	0.08	0.14	0.129	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.894588	NA	NA	0.162326	0.130277	NA	0.116	NA	6.2431406
1028	5	96127833	96127833	G	A	exonic	ERAP1	NA	synonymous SNV	ERAP1:NM_001040458:exon8:c.C1251T:p.H417H,ERAP1:NM_001198541:exon8:c.C1251T:p.H417H,ERAP1:NM_016442:exon8:c.C1251T:p.H417H	exonic	ENSG00000164307	NA	synonymous SNV	ENSG00000164307:ENST00000296754:exon8:c.C1251T:p.H417H,ENSG00000164307:ENST00000443439:exon8:c.C1251T:p.H417H	Score=407;Name=lod=60	NA	5q15	NA	NA	NA	NA	rs3213809	0.09	0.09	0.063	0.096845	0.1481	0.0268	0.2507	0.0144	0.1186	0.14	0.03	0.22	0.01	0.1318	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.070161	NA	NA	0.144186	0.032002	NA	0.181	NA	6.2425806
1028	4	55130078	55130078	T	C	exonic	PDGFRA	NA	synonymous SNV	PDGFRA:NM_006206:exon4:c.T612C:p.N204N	exonic	ENSG00000134853	NA	synonymous SNV	ENSG00000134853:ENST00000257290:exon4:c.T612C:p.N204N,ENSG00000134853:ENST00000508170:exon4:c.T612C:p.N204N,ENSG00000134853:ENST00000509490:exon4:c.T612C:p.N204N	NA	NA	4q12	Score=896;Name=V$FREAC7_01	NA	NA	NA	rs2229307	0.2	0.2	0.201	0.236222	0.1233	0.2034	0.3487	0.2776	0.2505	0.13	0.21	0.27	0.25	0.1796	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.006372	NA	NA	0.121395	0.250113	NA	0.268	NA	6.2423716
1028	19	55879872	55879872	C	T	exonic	IL11	NA	synonymous SNV	IL11:NM_001267718:exon2:c.G9A:p.A3A,IL11:NM_000641:exon3:c.G246A:p.A82A	exonic	ENSG00000095752	NA	synonymous SNV	ENSG00000095752:ENST00000587093:exon2:c.G9A:p.A3A,ENSG00000095752:ENST00000590625:exon2:c.G9A:p.A3A,ENSG00000095752:ENST00000264563:exon3:c.G246A:p.A82A,ENSG00000095752:ENST00000585513:exon3:c.G246A:p.A82A	NA	Name=Response to antidepressants	19q13.42	Score=770;Name=V$YY1_02	NA	NA	NA	rs1126757	0.43	0.43	0.379	0.394369	0.4722	0.7093	0.4452	0.0234	0.455	0.49	0.7	0.41	0.04	0.4829	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.345607	NA	NA	0.469419	0.095325	NA	0.348	NA	6.2421476
1028	6	1742794	1742794	A	G	exonic	GMDS	NA	synonymous SNV	GMDS:NM_001253846:exon8:c.T708C:p.D236D,GMDS:NM_001500:exon8:c.T798C:p.D266D	exonic	ENSG00000112699	NA	synonymous SNV	ENSG00000112699:ENST00000380815:exon8:c.T798C:p.D266D,ENSG00000112699:ENST00000530927:exon8:c.T708C:p.D236D	Score=582;Name=lod=309	NA	6p25.3	Score=867;Name=V$YY1_01	NA	NA	NA	rs3734739	0.48	0.48	0.445	0.486821	0.4901	0.6607	0.4726	0.2867	0.5849	0.49	0.63	0.48	0.29	0.4831	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.608802	NA	NA	0.451744	0.31389	NA	0.486	NA	6.2417226
1028	9	138515991	138515991	A	G	exonic	GLT6D1	NA	synonymous SNV	GLT6D1:NM_182974:exon5:c.T783C:p.T261T	exonic	ENSG00000204007	NA	synonymous SNV	ENSG00000204007:ENST00000371763:exon5:c.T783C:p.T261T	Score=300;Name=lod=22	NA	9q34.3	NA	NA	NA	NA	rs12351198	0.16	0.16	0.159	0.164137	0.1362	0.2183	0.1902	0.1694	0.1115	0.13	0.21	0.2	0.13	0.1498	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.32775	NA	NA	0.139785	0.147443	NA	0.188	NA	6.2408816
1028	19	35612168	35612168	T	A	exonic	FXYD3	NA	nonsynonymous SNV	FXYD3:NM_001136010:exon5:c.T116A:p.L39H,FXYD3:NM_001136009:exon6:c.T116A:p.L39H	exonic	ENSG00000089356	NA	nonsynonymous SNV	ENSG00000089356:ENST00000603449:exon4:c.T116A:p.L39H,ENSG00000089356:ENST00000454903:exon5:c.T116A:p.L39H,ENSG00000089356:ENST00000605552:exon5:c.T116A:p.L39H	NA	NA	19q13.12	NA	NA	NA	NA	rs1688016	0.31	0.31	0.292	0.35603	0.3698	0.2679	0.2493	0.2958	0.59	0.38	0.24	0.23	0.32	0.3665	0.38	.	.	0.0	B	0.0	B	.	.	1.000	P	.	.	.	.	-0.924	T	0.000	T	0.026	-0.256	2.768	0.693	-0.034	-0.057	2.532	-0.256355	NA	0	0.356512	0.316841	NA	0.37	NA	6.2405214
1028	6	41658566	41658566	C	T	exonic	TFEB	NA	synonymous SNV	TFEB:NM_001167827:exon3:c.G345A:p.G115G,TFEB:NM_001271944:exon3:c.G303A:p.G101G,TFEB:NM_001271945:exon3:c.G303A:p.G101G,TFEB:NM_007162:exon4:c.G303A:p.G101G	exonic	ENSG00000112561	NA	synonymous SNV	ENSG00000112561:ENST00000343317:exon2:c.G561A:p.G187G,ENSG00000112561:ENST00000358871:exon3:c.G345A:p.G115G,ENSG00000112561:ENST00000373033:exon3:c.G303A:p.G101G,ENSG00000112561:ENST00000394283:exon3:c.G303A:p.G101G,ENSG00000112561:ENST00000403298:exon3:c.G303A:p.G101G,ENSG00000112561:ENST00000416140:exon3:c.G303A:p.G101G,ENSG00000112561:ENST00000419396:exon3:c.G303A:p.G101G,ENSG00000112561:ENST00000419574:exon3:c.G303A:p.G101G,ENSG00000112561:ENST00000230323:exon4:c.G303A:p.G101G	Score=512;Name=lod=160	NA	6p21.1	NA	NA	NA	NA	rs2273068	0.12	0.12	0.101	0.110224	0.1521	0.1488	0.085	0.059	0.1145	0.15	0.15	0.09	0.06	0.1385	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.004688	NA	NA	0.135814	0.087154	NA	0.065	NA	6.2402526
1028	6	90499502	90499502	G	A	exonic	MDN1	NA	synonymous SNV	MDN1:NM_014611:exon7:c.C1227T:p.D409D	exonic	ENSG00000112159	NA	synonymous SNV	ENSG00000112159:ENST00000369393:exon7:c.C1227T:p.D409D,ENSG00000112159:ENST00000428876:exon7:c.C1227T:p.D409D,ENSG00000112159:ENST00000439638:exon7:c.C1227T:p.D409D	Score=610;Name=lod=402	NA	6q15	NA	NA	NA	NA	rs1036853	0.08	0.08	0.067	0.0904553	0.1581	0.0496	0.0922	0.0053	0.1769	0.15	0.04	0.09	0.01	0.124	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.404408	NA	NA	0.144535	0.028824	NA	0.123	NA	6.2400316
1028	19	22363493	22363493	G	A	exonic	ZNF676	NA	synonymous SNV	ZNF676:NM_001001411:exon3:c.C1026T:p.C342C	exonic	ENSG00000196109	NA	synonymous SNV	ENSG00000196109:ENST00000397121:exon3:c.C1026T:p.C342C	Score=289;Name=lod=20	NA	19p12	NA	NA	NA	NA	rs78855594	NA	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4281	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.402858	NA	NA	NA	NA	NA	0.384	NA	6.2385666
1028	17	293138	293138	G	A	exonic	FAM101B	NA	unknown	UNKNOWN	exonic	ENSG00000183688	NA	synonymous SNV	ENSG00000183688:ENST00000329099:exon2:c.C252T:p.F84F	Score=422;Name=lod=69	NA	17p13.3	NA	NA	NA	NA	rs8069166	0.04	0.04	0.045	0.053115	0.0239	0.0516	0.0259	0.0794	0.0685	0.03	0.04	0.02	0.08	0.0384	0.098	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.611376	NA	NA	0.032573	0.067867	ID=COSM148142;OCCURENCE=1(stomach)	0.072	NA	6.2384603
1028	4	48588742	48588742	C	T	exonic	FRYL	NA	synonymous SNV	FRYL:NM_015030:exon19:c.G1644A:p.G548G	exonic	ENSG00000075539	NA	synonymous SNV	ENSG00000075539:ENST00000506685:exon9:c.G762A:p.G254G,ENSG00000075539:ENST00000503238:exon16:c.G1644A:p.G548G,ENSG00000075539:ENST00000358350:exon19:c.G1644A:p.G548G,ENSG00000075539:ENST00000507711:exon19:c.G1644A:p.G548G,ENSG00000075539:ENST00000537810:exon19:c.G1644A:p.G548G	Score=563;Name=lod=258	NA	4p11	Score=986;Name=V$MZF1_01	NA	NA	NA	rs34558821	0.47	0.47	0.46	0.532548	0.4553	0.5288	0.353	0.6218	0.6227	0.45	0.49	0.31	0.6	0.4876	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.899005	NA	NA	0.48589	0.623623	NA	0.551	NA	6.2378766
1028	2	207527840	207527840	G	T	exonic	DYTN	NA	nonsynonymous SNV	DYTN:NM_001093730:exon11:c.C1420A:p.Q474K	exonic	ENSG00000232125	NA	nonsynonymous SNV	ENSG00000232125:ENST00000452335:exon11:c.C1420A:p.Q474K	NA	NA	2q33.3	NA	NA	NA	NA	rs2115591	0.39	0.39	0.366	0.394968	0.3738	0.1716	0.4942	0.643	0.2413	0.37	0.19	0.45	0.62	0.3638	0.62	1	T	0.0	B	0.0	B	.	.	1.000	P	-0.695	N	2.68	T	-0.956	T	0.000	T	0.042	-1.413	0.022	0.26	-0.055	0.883	4.867	-1.412533	NA	1	0.357895	0.578431	NA	0.406	NA	6.2378384
1028	9	118032	118032	G	A	exonic	FOXD4	NA	synonymous SNV	FOXD4:NM_207305:exon1:c.C88T:p.L30L	exonic	ENSG00000170122	NA	synonymous SNV	ENSG00000170122:ENST00000382500:exon1:c.C88T:p.L30L	Score=389;Name=lod=51	NA	9p24.3	NA	NA	NA	NA	rs9406416	0.18	0.18	0.11	0.183506	0.2266	0.0476	0.2406	0.239	0.1636	0.23	0.05	0.26	0.21	0.2023	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.50568	NA	NA	NA	NA	NA	0.007	NA	6.2377666
1028	12	52695754	52695754	C	T	exonic	KRT86	NA	synonymous SNV	KRT86:NM_002284:exon1:c.C54T:p.C18C	exonic	ENSG00000170442	NA	synonymous SNV	ENSG00000170442:ENST00000293525:exon1:c.C54T:p.C18C,ENSG00000170442:ENST00000544024:exon2:c.C54T:p.C18C,ENSG00000170442:ENST00000553310:exon2:c.C54T:p.C18C,ENSG00000170442:ENST00000423955:exon3:c.C54T:p.C18C	Score=385;Name=lod=49	NA	12q13.13	NA	NA	NA	NA	rs74651927	0.12	0.12	0.106	0.154553	0.1282	0.0883	0.1326	0.171	0.2434	0.11	0.08	0.13	0.17	0.154	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.45624	NA	NA	0.146859	0.164958	NA	0.159	NA	6.2376076
1028	4	41992677	41992677	C	G	exonic	SLC30A9	NA	synonymous SNV	SLC30A9:NM_006345:exon1:c.C9G:p.P3P	exonic	ENSG00000014824	NA	synonymous SNV	ENSG00000014824:ENST00000264451:exon1:c.C9G:p.P3P,ENSG00000014824:ENST00000513699:exon1:c.C9G:p.P3P	Score=473;Name=lod=112	NA	4p13	NA	Name=ETS1,TAF1,Pol2(b),HMGN3,ELK4,YY1,Pol2(phosphoS2),Pol2,Pol2-4H8,TR4,ZNF263,TAF7_(SQ-8),Sin3Ak-20,YY1_(C-20),NFKB,HEY1,AP-2gamma,ELF1_(SC-631),CCNT2,CTCF,TBP	Name=148	NA	rs2581434	0.73	0.73	0.683	0.706869	0.8151	0.9593	0.8401	0.2458	0.864	0.83	0.96	0.83	0.25	0.798	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.01916	NA	NA	0.816667	0.3328	NA	0.674	NA	6.2368996
1028	12	52695787	52695787	C	T	exonic	KRT86	NA	synonymous SNV	KRT86:NM_002284:exon1:c.C87T:p.A29A	exonic	ENSG00000170442	NA	synonymous SNV	ENSG00000170442:ENST00000293525:exon1:c.C87T:p.A29A,ENSG00000170442:ENST00000544024:exon2:c.C87T:p.A29A,ENSG00000170442:ENST00000553310:exon2:c.C87T:p.A29A,ENSG00000170442:ENST00000423955:exon3:c.C87T:p.A29A	Score=460;Name=lod=99	NA	12q13.13	NA	NA	NA	NA	rs112261068	0.12	0.12	0.095	0.155351	0.1282	0.0903	0.1354	0.1717	0.2423	0.11	0.08	0.13	0.17	0.1556	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.088278	NA	NA	0.146181	0.165222	NA	0.159	NA	6.2366856
1028	1	18808711	18808711	G	C	exonic	KLHDC7A	NA	synonymous SNV	KLHDC7A:NM_152375:exon1:c.G1236C:p.G412G	exonic	ENSG00000179023	NA	synonymous SNV	ENSG00000179023:ENST00000400664:exon1:c.G1236C:p.G412G	Score=363;Name=lod=40	NA	1p36.13	NA	NA	NA	NA	rs2992751	0.28	0.28	0.23	0.263778	0.1173	0.625	0.2349	0.1725	0.1861	0.11	0.62	0.24	0.18	0.1906	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.99317	NA	NA	0.122209	0.191784	NA	0.159	NA	6.2365576
1028	4	2194953	2194953	G	A	exonic	POLN	NA	synonymous SNV	POLN:NM_181808:exon5:c.C999T:p.G333G	exonic	ENSG00000130997	NA	synonymous SNV	ENSG00000130997:ENST00000382865:exon5:c.C999T:p.G333G,ENSG00000130997:ENST00000511885:exon7:c.C999T:p.G333G	Score=243;Name=lod=13	NA	4p16.3	NA	NA	NA	NA	rs10002583	0.32	0.32	0.315	0.330671	0.1243	0.372	0.2464	0.6029	0.1922	0.13	0.37	0.25	0.61	0.1905	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.313236	NA	NA	0.115465	0.535649	NA	0.384	NA	6.2364016
1028	21	38568308	38568308	C	T	exonic	TTC3	NA	synonymous SNV	TTC3:NM_001001894:exon42:c.C5550T:p.H1850H,TTC3:NM_003316:exon42:c.C5550T:p.H1850H	exonic	ENSG00000182670	NA	synonymous SNV	ENSG00000182670:ENST00000354749:exon41:c.C5550T:p.H1850H,ENSG00000182670:ENST00000355666:exon42:c.C5550T:p.H1850H,ENSG00000182670:ENST00000399017:exon42:c.C5550T:p.H1850H	Score=243;Name=lod=13	NA	21q22.13	NA	NA	NA	NA	rs6579	0.57	0.57	0.544	0.592053	0.4642	0.6032	0.6282	0.6445	0.6155	0.46	0.62	0.6	0.64	0.519	0.64	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.943	T	0.000	T	.	0.906	8.684	1.26	0.337	0.114	5.853	0.905837	NA	NA	0.447093	0.628292	NA	0.659	NA	6.2363736
1028	1	120057246	120057246	C	A	exonic	HSD3B1	NA	nonsynonymous SNV	HSD3B1:NM_000862:exon4:c.C1100A:p.T367N	exonic	ENSG00000203857	NA	nonsynonymous SNV	ENSG00000203857:ENST00000528909:exon3:c.C1100A:p.T367N,ENSG00000203857:ENST00000235547:exon4:c.C1106A:p.T369N,ENSG00000203857:ENST00000369413:exon4:c.C1100A:p.T367N	NA	NA	1p12	NA	NA	NA	NA	rs1047303	0.8	0.8	0.8	0.833466	0.66	0.9177	0.7954	0.9145	0.8425	0.67	0.91	0.76	0.92	0.7554	0.92	0.37	T	0.021	B	0.025	B	0.233	N	1.000	P	2.44	M	-0.58	T	-1.061	T	0.151	T	0.029	-1.632	0.013	-0.043	0.216	-0.086	4.839	-1.631737	NA	0.3	0.681712	0.88079	NA	0.739	NA	6.2362214
1028	12	57535266	57535266	C	T	exonic	LRP1	NA	synonymous SNV	LRP1:NM_002332:exon3:c.C300T:p.D100D	exonic	ENSG00000123384	NA	synonymous SNV	ENSG00000123384:ENST00000243077:exon3:c.C300T:p.D100D,ENSG00000123384:ENST00000338962:exon3:c.C300T:p.D100D,ENSG00000123384:ENST00000553277:exon3:c.C300T:p.D100D,ENSG00000123384:ENST00000554174:exon3:c.C300T:p.D100D	Score=441;Name=lod=83	NA	12q13.3	NA	NA	NA	NA	rs1799986	0.1	0.1	0.101	0.0934505	0.1511	0.0694	0.072	0.0522	0.1299	0.17	0.07	0.08	0.06	0.1264	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.758626	NA	NA	0.153372	0.057422	NA	0.101	NA	6.2357946
1028	12	41966306	41966306	G	A	exonic	PDZRN4	NA	synonymous SNV	PDZRN4:NM_013377:exon8:c.G951A:p.E317E,PDZRN4:NM_001164595:exon10:c.G1725A:p.E575E	exonic	ENSG00000165966	NA	synonymous SNV	ENSG00000165966:ENST00000539469:exon8:c.G951A:p.E317E,ENSG00000165966:ENST00000298919:exon10:c.G945A:p.E315E,ENSG00000165966:ENST00000402685:exon10:c.G1725A:p.E575E	Score=336;Name=lod=31	NA	12q12	NA	NA	NA	NA	rs12298745	0.14	0.14	0.138	0.178115	0.1372	0.1855	0.1268	0.1415	0.2986	0.14	0.18	0.1	0.1	0.1587	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.317271	NA	NA	0.135	0.136632	NA	0.145	NA	6.2357666
1028	21	38512956	38512956	A	G	exonic	TTC3	NA	synonymous SNV	TTC3:NM_001001894:exon20:c.A1755G:p.V585V,TTC3:NM_003316:exon20:c.A1755G:p.V585V	exonic	ENSG00000182670	NA	synonymous SNV	ENSG00000182670:ENST00000540756:exon11:c.A825G:p.V275V,ENSG00000182670:ENST00000354749:exon19:c.A1755G:p.V585V,ENSG00000182670:ENST00000438055:exon19:c.A1701G:p.V567V,ENSG00000182670:ENST00000355666:exon20:c.A1755G:p.V585V,ENSG00000182670:ENST00000399017:exon20:c.A1755G:p.V585V,ENSG00000182670:ENST00000418766:exon20:c.A1755G:p.V585V,ENSG00000182670:ENST00000450533:exon20:c.A1755G:p.V585V	Score=590;Name=lod=332	NA	21q22.13	NA	NA	Name=4	NA	rs1133001	0.57	0.57	0.527	0.591853	0.4642	0.6032	0.6282	0.6445	0.6145	0.46	0.62	0.6	0.64	0.5193	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.261323	1.261323	NA	0.447442	0.62778	NA	0.667	NA	6.2357246
1028	22	43036245	43036245	G	A	exonic	ATP5L2	NA	synonymous SNV	ATP5L2:NM_001165877:exon1:c.C36T:p.T12T	exonic	ENSG00000249222	NA	synonymous SNV	ENSG00000249222:ENST00000505920:exon1:c.C36T:p.T12T	NA	NA	22q13.2	NA	NA	Name=18	NA	rs6519327	0.26	0.26	0.262	0.272764	0.1123	0.5982	0.1297	0.2375	0.2515	0.11	0.55	0.12	0.25	0.2138	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.27242	NA	NA	0.10528	0.213873	NA	0.029	NA	6.2352866
1028	9	130206762	130206762	C	T	exonic	ZNF79	NA	synonymous SNV	ZNF79:NM_007135:exon5:c.C783T:p.N261N	exonic	ENSG00000196152	NA	synonymous SNV	ENSG00000196152:ENST00000342483:exon5:c.C783T:p.N261N,ENSG00000196152:ENST00000543471:exon6:c.C711T:p.N237N	NA	NA	9q33.3	NA	Name=Pol2	Name=95	NA	rs2248025	0.36	0.36	0.358	0.332069	0.5318	0.1647	0.2853	0.3215	0.3466	0.54	0.13	0.33	0.36	0.416	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.147756	NA	NA	0.483837	0.34975	ID=COSM150719;OCCURENCE=1(stomach)	0.268	NA	6.2350296
1029	12	32854366	32854366	A	C	exonic	DNM1L	NA	synonymous SNV	DNM1L:NM_005690:exon2:c.A120C:p.S40S,DNM1L:NM_012062:exon2:c.A120C:p.S40S,DNM1L:NM_012063:exon2:c.A120C:p.S40S	exonic	ENSG00000087470	NA	synonymous SNV	ENSG00000087470:ENST00000546757:exon1:c.A18C:p.S6S,ENSG00000087470:ENST00000266481:exon2:c.A120C:p.S40S,ENSG00000087470:ENST00000358214:exon2:c.A120C:p.S40S,ENSG00000087470:ENST00000381000:exon2:c.A120C:p.S40S,ENSG00000087470:ENST00000413295:exon2:c.A120C:p.S40S,ENSG00000087470:ENST00000434676:exon2:c.A120C:p.S40S,ENSG00000087470:ENST00000452533:exon2:c.A120C:p.S40S,ENSG00000087470:ENST00000546649:exon2:c.A120C:p.S40S,ENSG00000087470:ENST00000547312:exon2:c.A120C:p.S40S,ENSG00000087470:ENST00000548750:exon2:c.A120C:p.S40S,ENSG00000087470:ENST00000549701:exon2:c.A120C:p.S40S,ENSG00000087470:ENST00000550154:exon2:c.A120C:p.S40S,ENSG00000087470:ENST00000551476:exon2:c.A120C:p.S40S,ENSG00000087470:ENST00000551643:exon2:c.A120C:p.S40S,ENSG00000087470:ENST00000553257:exon2:c.A120C:p.S40S	Score=611;Name=lod=406	NA	12p11.21	NA	NA	NA	NA	rs10844308	0.13	0.13	0.12	0.126597	0.161	0.0813	0.0937	0.177	0.093	0.16	0.07	0.09	0.17	0.1256	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.349032	1.349032	NA	0.145116	0.16364	NA	0.08	NA	6.2349506
1029	5	149754991	149754991	C	T	exonic	TCOF1	NA	synonymous SNV	TCOF1:NM_000356:exon10:c.C1347T:p.P449P,TCOF1:NM_001135245:exon10:c.C1347T:p.P449P,TCOF1:NM_001008657:exon11:c.C1578T:p.P526P,TCOF1:NM_001135243:exon11:c.C1578T:p.P526P,TCOF1:NM_001135244:exon11:c.C1578T:p.P526P,TCOF1:NM_001195141:exon11:c.C1578T:p.P526P	exonic	ENSG00000070814	NA	synonymous SNV	ENSG00000070814:ENST00000323668:exon10:c.C1347T:p.P449P,ENSG00000070814:ENST00000445265:exon10:c.C1347T:p.P449P,ENSG00000070814:ENST00000377797:exon11:c.C1578T:p.P526P,ENSG00000070814:ENST00000394269:exon11:c.C1578T:p.P526P,ENSG00000070814:ENST00000427724:exon11:c.C1578T:p.P526P,ENSG00000070814:ENST00000439160:exon11:c.C1578T:p.P526P,ENSG00000070814:ENST00000451292:exon11:c.C1578T:p.P526P,ENSG00000070814:ENST00000504761:exon11:c.C1578T:p.P526P,ENSG00000070814:ENST00000513346:exon11:c.C1578T:p.P526P	NA	NA	5q32	NA	NA	NA	NA	rs2071238	0.14	0.14	0.133	0.158746	0.1292	0.1448	0.0922	0.2383	0.1431	0.12	0.1	0.11	0.25	0.1455	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.158432	NA	NA	0.157093	0.23468	NA	0.138	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118603.2;CLNDSDB=.;CLNDSDBID=.	6.2348736
1029	3	169988286	169988286	C	T	exonic	PRKCI	NA	synonymous SNV	PRKCI:NM_002740:exon6:c.C528T:p.L176L	exonic	ENSG00000163558	NA	synonymous SNV	ENSG00000163558:ENST00000295797:exon6:c.C528T:p.L176L	Score=670;Name=lod=706	NA	3q26.2	NA	NA	NA	NA	rs56257047	0.1	0.1	0.088	0.0754792	0.1541	0.0645	0.1225	0.0204	0.047	0.16	0.06	0.15	0.03	0.127	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.76149	NA	NA	0.151047	0.039946	NA	0.051	NA	6.2345196
1029	8	2965244	2965244	T	C	exonic	CSMD1	NA	synonymous SNV	CSMD1:NM_033225:exon45:c.A6831G:p.E2277E	exonic	ENSG00000183117	NA	synonymous SNV	ENSG00000183117:ENST00000537824:exon45:c.A6831G:p.E2277E,ENSG00000183117:ENST00000542608:exon45:c.A6831G:p.E2277E,ENSG00000183117:ENST00000400186:exon46:c.A6834G:p.E2278E,ENSG00000183117:ENST00000520002:exon46:c.A6834G:p.E2278E,ENSG00000183117:ENST00000602557:exon46:c.A6834G:p.E2278E,ENSG00000183117:ENST00000602723:exon46:c.A6834G:p.E2278E	Score=480;Name=lod=119	NA	8p23.2	NA	NA	Name=9	NA	rs3824271	0.83	0.83	0.817	0.839657	0.7952	0.9464	0.8545	0.7352	0.9059	0.77	0.96	0.86	0.73	0.8314	0.96	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.010	T	0.000	T	.	-0.264	2.733	-1.26	-0.216	0.183	9.806	-0.263931	NA	NA	0.805623	0.75	NA	0.891	NA	6.2344436
1029	16	27692835	27692835	G	A	exonic	KIAA0556	NA	synonymous SNV	KIAA0556:NM_015202:exon8:c.G924A:p.Q308Q	exonic	ENSG00000047578	NA	synonymous SNV	ENSG00000047578:ENST00000261588:exon8:c.G924A:p.Q308Q	Score=317;Name=lod=26	NA	16p12.1	NA	NA	NA	NA	rs12923861	0.12	0.12	0.106	0.10603	0.1541	0.001	0.1902	0.1528	0.0419	0.16	NA	0.17	0.14	0.1294	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.365518	NA	NA	0.148953	0.14975	NA	0.072	NA	6.2342136
1029	6	70866609	70866609	C	T	exonic	COL19A1	NA	synonymous SNV	COL19A1:NM_001858:exon34:c.C2286T:p.G762G	exonic	ENSG00000082293	NA	synonymous SNV	ENSG00000082293:ENST00000393344:exon21:c.C1152T:p.G384G,ENSG00000082293:ENST00000322773:exon34:c.C2286T:p.G762G	Score=450;Name=lod=90	NA	6q13	Score=820;Name=V$CEBP_C	NA	NA	NA	rs2229799	0.48	0.48	0.486	0.514776	0.4742	0.3145	0.5101	0.6914	0.5276	0.46	0.33	0.49	0.67	0.4883	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.52056	NA	NA	0.47	0.660917	NA	0.536	NA	6.2341666
1029	1	179426268	179426268	A	G	intronic	AXDND1	NA	NA	NA	ncRNA_exonic	ENSG00000236539	NA	NA	NA	Score=699;Name=lod=927	NA	1q25.2	NA	Name=YY1_(C-20)	NA	NA	rs73036735	0.1	0.1	0.104	0.0942492	0.0994	0.1032	0.062	0.1536	0.0225	0.1	0.08	0.07	0.16	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.346393	NA	NA	NA	NA	NA	0.123	NA	6.2339333
1029	19	52468587	52468587	G	T	exonic	ZNF350	NA	synonymous SNV	ZNF350:NM_021632:exon5:c.C1119A:p.P373P	exonic	ENSG00000256683	NA	synonymous SNV	ENSG00000256683:ENST00000243644:exon5:c.C1119A:p.P373P	Score=428;Name=lod=73	NA	19q13.41	NA	NA	NA	NA	rs3764538	0.16	0.16	0.159	0.175719	0.1471	0.2331	0.1297	0.1029	0.2771	0.16	0.2	0.11	0.12	0.1584	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.3657	NA	NA	0.127442	0.142987	NA	0.116	NA	6.2337246
1029	18	28913599	28913599	C	T	exonic	DSG1	NA	synonymous SNV	DSG1:NM_001942:exon7:c.C732T:p.G244G	exonic	ENSG00000134760	NA	synonymous SNV	ENSG00000134760:ENST00000257192:exon7:c.C732T:p.G244G	Score=352;Name=lod=36	NA	18q12.1	Score=726;Name=V$NRSF_01	NA	NA	NA	rs12967407	0.32	0.32	0.313	0.327676	0.501	0.0665	0.2882	0.292	0.4949	0.51	0.06	0.34	0.29	0.4343	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.312856	NA	NA	0.497791	0.316841	NA	0.377	NA	6.2335756
1029	16	2260612	2260612	T	C	exonic	BRICD5	NA	nonsynonymous SNV	BRICD5:NM_182563:exon2:c.A91G:p.S31G	exonic	ENSG00000182685	NA	nonsynonymous SNV	ENSG00000182685:ENST00000328540:exon2:c.A91G:p.S31G,ENSG00000182685:ENST00000562360:exon2:c.A91G:p.S31G,ENSG00000182685:ENST00000566018:exon2:c.A91G:p.S31G	NA	NA	16p13.3	NA	NA	NA	NA	rs26856	0.67	0.67	0.66	0.632788	0.6998	0.6042	0.6671	0.6157	0.592	0.72	0.64	0.67	0.64	0.6901	0.72	1	T	0.0	B	0.0	B	0.005	N	1.000	P	-0.75	N	1.97	T	-0.959	T	0.000	T	0.068	-1.71	0.011	2.61	0.338	0.270	4.926	-1.709638	NA	1	0.710312	0.642629	NA	0.399	NA	6.2331214
1029	2	170099473	170099473	T	C	exonic	LRP2	NA	synonymous SNV	LRP2:NM_004525:exon24:c.A3660G:p.A1220A	exonic	ENSG00000081479	NA	synonymous SNV	ENSG00000081479:ENST00000443831:exon22:c.A3249G:p.A1083A,ENSG00000081479:ENST00000263816:exon24:c.A3660G:p.A1220A	NA	NA	2q31.1	Score=836;Name=V$CEBP_C	NA	NA	NA	rs831042	0.51	0.51	0.462	0.581869	0.4612	0.4772	0.6153	0.6082	0.7546	0.46	0.46	0.61	0.57	0.5231	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.088341	NA	NA	0.449302	0.608488	NA	0.609	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117527.2;CLNDSDB=.;CLNDSDBID=.	6.2330646
1029	21	32493031	32493031	A	G	exonic	TIAM1	NA	synonymous SNV	TIAM1:NM_003253:exon29:c.T4431C:p.G1477G	exonic	ENSG00000156299	NA	synonymous SNV	ENSG00000156299:ENST00000541036:exon24:c.T4251C:p.G1417G,ENSG00000156299:ENST00000286827:exon29:c.T4431C:p.G1477G	Score=566;Name=lod=265	NA	21q22.11	Score=990;Name=V$MZF1_01	NA	NA	NA	rs762194	0.58	0.58	0.561	0.535343	0.4712	0.7639	0.598	0.531	0.3272	0.47	0.75	0.59	0.54	0.5033	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.141979	NA	NA	0.459302	0.519292	NA	0.536	NA	6.2328646
1029	5	149755421	149755421	A	G	exonic	TCOF1	NA	synonymous SNV	TCOF1:NM_000356:exon11:c.A1611G:p.S537S,TCOF1:NM_001135245:exon11:c.A1611G:p.S537S,TCOF1:NM_001008657:exon12:c.A1842G:p.S614S,TCOF1:NM_001135243:exon12:c.A1842G:p.S614S,TCOF1:NM_001135244:exon12:c.A1842G:p.S614S,TCOF1:NM_001195141:exon12:c.A1842G:p.S614S	exonic	ENSG00000070814	NA	synonymous SNV	ENSG00000070814:ENST00000323668:exon11:c.A1611G:p.S537S,ENSG00000070814:ENST00000445265:exon11:c.A1611G:p.S537S,ENSG00000070814:ENST00000377797:exon12:c.A1842G:p.S614S,ENSG00000070814:ENST00000394269:exon12:c.A1842G:p.S614S,ENSG00000070814:ENST00000427724:exon12:c.A1842G:p.S614S,ENSG00000070814:ENST00000439160:exon12:c.A1842G:p.S614S,ENSG00000070814:ENST00000451292:exon12:c.A1842G:p.S614S,ENSG00000070814:ENST00000504761:exon12:c.A1842G:p.S614S,ENSG00000070814:ENST00000513346:exon12:c.A1842G:p.S614S	NA	NA	5q32	NA	NA	NA	NA	rs2071239	0.15	0.15	0.139	0.16254	0.1292	0.1448	0.0937	0.2511	0.1442	0.12	0.1	0.11	0.26	0.1464	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.545719	NA	NA	0.158721	0.253291	NA	0.138	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118606.2;CLNDSDB=.;CLNDSDBID=.	6.2323456
1029	10	55955485	55955485	A	G	exonic	PCDH15	NA	synonymous SNV	PCDH15:NM_001142767:exon10:c.T1152C:p.T384T,PCDH15:NM_001142768:exon10:c.T1197C:p.T399T,PCDH15:NM_001142773:exon10:c.T1197C:p.T399T,PCDH15:NM_001142764:exon11:c.T1263C:p.T421T,PCDH15:NM_001142765:exon11:c.T1263C:p.T421T,PCDH15:NM_001142766:exon11:c.T1263C:p.T421T,PCDH15:NM_033056:exon11:c.T1263C:p.T421T,PCDH15:NM_001142763:exon12:c.T1278C:p.T426T	exonic	ENSG00000150275	NA	synonymous SNV	ENSG00000150275:ENST00000409834:exon3:c.T75C:p.T25T,ENSG00000150275:ENST00000395432:exon10:c.T1152C:p.T384T,ENSG00000150275:ENST00000395433:exon10:c.T1197C:p.T399T,ENSG00000150275:ENST00000320301:exon11:c.T1263C:p.T421T,ENSG00000150275:ENST00000361849:exon11:c.T1263C:p.T421T,ENSG00000150275:ENST00000373955:exon11:c.T1263C:p.T421T,ENSG00000150275:ENST00000373965:exon11:c.T1263C:p.T421T,ENSG00000150275:ENST00000395430:exon11:c.T1263C:p.T421T,ENSG00000150275:ENST00000395438:exon11:c.T1263C:p.T421T,ENSG00000150275:ENST00000395440:exon11:c.T1263C:p.T421T,ENSG00000150275:ENST00000395445:exon11:c.T1263C:p.T421T,ENSG00000150275:ENST00000395446:exon11:c.T1263C:p.T421T,ENSG00000150275:ENST00000437009:exon11:c.T1263C:p.T421T,ENSG00000150275:ENST00000448885:exon11:c.T1263C:p.T421T,ENSG00000150275:ENST00000373957:exon13:c.T1197C:p.T399T,ENSG00000150275:ENST00000414778:exon13:c.T1278C:p.T426T	NA	NA	10q21.1	NA	NA	NA	NA	rs7921598	0.22	0.22	0.236	0.25599	0.1382	0.0863	0.2118	0.5348	0.2065	0.13	0.09	0.19	0.53	0.1689	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.843948	NA	NA	0.12814	0.478438	NA	0.21	CLINSIG=non-pathogenic|untested;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|not;CLNACC=RCV000039698.1|RCV000086941.1;CLNDSDB=.|.;CLNDSDBID=.|.	6.2314266
1029	22	42537196	42537196	T	C	ncRNA_exonic	CYP2D7P1	NA	NA	NA	exonic	ENSG00000205702	NA	nonsynonymous SNV	ENSG00000205702:ENST00000435101:exon3:c.A101G:p.H34R	NA	NA	22q13.2	NA	NA	NA	NA	rs2982054	0.69	0.69	0.572	0.723442	0.672	0.8492	0.6974	0.7443	0.637	0.63	0.8	0.66	0.66	0.5977	0.8	1	T	0.0	B	0.0	B	0.000	N	1.000	P	.	.	-1.14	T	-0.932	T	0.000	T	.	-2.657	0	2.86	0.418	0.172	6.411	-2.657181	NA	1	NA	NA	NA	0.717	NA	6.2303
1029	1	16918502	16918502	A	G	exonic	NBPF1	NA	unknown	UNKNOWN	exonic	ENSG00000219481	NA	synonymous SNV	ENSG00000219481:ENST00000392963:exon4:c.T15C:p.A5A,ENSG00000219481:ENST00000430580:exon7:c.T15C:p.A5A	NA	NA	1p36.13	NA	Name=SMC3_(ab9263),CTCF,CTCF_(SC-5916),CTCF_(C-20),Rad21	Name=137	NA	rs3925698	NA	NA	0.467	0.493011	0.6024	0.6101	0.536	0.2579	0.547	NA	NA	NA	NA	0.5013	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.353923	NA	NA	NA	NA	NA	NA	NA	6.2296333
1029	2	137814477	137814477	C	G	exonic	THSD7B	NA	unknown	UNKNOWN	exonic	ENSG00000144229	NA	synonymous SNV	ENSG00000144229:ENST00000543459:exon1:c.C204G:p.P68P,ENSG00000144229:ENST00000272643:exon2:c.C627G:p.P209P,ENSG00000144229:ENST00000413152:exon2:c.C534G:p.P178P,ENSG00000144229:ENST00000409968:exon3:c.C627G:p.P209P	Score=325;Name=lod=28	NA	2q22.1	NA	Name=CTCF,Rad21	NA	NA	rs17727482	0.18	0.18	0.153	0.165935	0.3956	0.002	0.2594	0.0166	0.2342	0.38	0.0017	0.28	0.02	0.3082	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.326861	NA	NA	0.400024	0.071907	NA	0.21	NA	6.2295093
1029	15	22939192	22939192	G	A	exonic	CYFIP1	NA	synonymous SNV	CYFIP1:NM_014608:exon10:c.G918A:p.P306P	exonic	ENSG00000068793	NA	synonymous SNV	ENSG00000068793:ENST00000313077:exon10:c.G918A:p.P306P,ENSG00000068793:ENST00000560848:exon11:c.G918A:p.P306P	NA	NA	15q11.2	NA	Name=c-Fos	Name=42	NA	rs11633474	0.37	0.37	0.371	0.330072	0.505	0.1141	0.4741	0.3457	0.2495	0.52	0.12	0.48	0.36	0.4371	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.347173	NA	NA	0.495116	0.350204	ID=COSM433627;OCCURENCE=1(breast)	0.319	NA	6.2294506
1029	22	24034288	24034288	A	G	exonic	RGL4	NA	nonsynonymous SNV	RGL4:NM_153615:exon1:c.A71G:p.Q24R	exonic	ENSG00000159496	NA	nonsynonymous SNV	ENSG00000159496:ENST00000290691:exon1:c.A71G:p.Q24R,ENSG00000159496:ENST00000423392:exon1:c.A71G:p.Q24R,ENSG00000159496:ENST00000441897:exon3:c.A71G:p.Q24R	NA	NA	22q11.23	NA	NA	NA	NA	rs738786	0.55	0.55	0.522	0.55012	0.5328	0.6071	0.6167	0.4372	0.6145	0.55	0.61	0.56	0.46	0.5559	0.61	0.93	T	0.659	P	0.403	B	0.060	U	1.000	P	0.695	N	1.56	T	-0.965	T	0.000	T	0.109	0.868	8.519	-0.665	-0.151	-0.294	2.363	0.868317	NA	0.01	0.515349	0.448025	NA	0.543	NA	6.2292844
1029	3	180319981	180319981	G	T	UTR5	TTC14	NM_133462:c.-69G>T,NM_001042601:c.-69G>T	NA	NA	UTR5	ENSG00000163728	ENST00000296015:c.-69G>T,ENST00000491380:c.-69G>T,ENST00000412756:c.-69G>T	NA	NA	NA	NA	3q26.33	NA	Name=CHD2_(N-1250),IRF1,CEBPB,RXRA,GTF2F1_(RAP-74),TBP,p300,Oct-2,SETDB1,SRF,PAX5-C20,HEY1,FOXA2_(SC-6554),NFKB,FOXA1_(SC-101058),AP-2gamma,ELF1_(SC-631),c-Myc,Max,TR4,Pol2-4H8,KAP1,GATA3_(SC-268),MEF2A,BCLAF1_(M33-P5B11),CtBP2,HA-E2F1,YY1_(C-20),Sin3Ak-20,Egr-1,Pol2(phosphoS2),Pol2,GABP,POU2F2,ELK4,FOXA1_(C-20),Pol2(b),GATA-1,TAF1	Name=146	NA	rs1532485	0.08	0.08	0.079	0.0696885	0.1044	NA	0.1167	0.0787	0.0603	0.12	NA	0.1	0.08	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.008714	NA	NA	NA	NA	NA	0.051	NA	6.2289334
1029	14	23944514	23944514	C	A	exonic	NGDN	NA	synonymous SNV	NGDN:NM_001042635:exon4:c.C279A:p.R93R,NGDN:NM_015514:exon4:c.C279A:p.R93R	exonic	ENSG00000129460	NA	synonymous SNV	ENSG00000129460:ENST00000555128:exon3:c.C204A:p.R68R,ENSG00000129460:ENST00000397154:exon4:c.C279A:p.R93R,ENSG00000129460:ENST00000408901:exon4:c.C279A:p.R93R	Score=658;Name=lod=630	NA	14q11.2	NA	NA	NA	NA	rs2236261	0.69	0.69	0.688	0.678315	0.8479	0.6409	0.6873	0.5378	0.726	0.84	0.65	0.67	0.54	0.7646	0.84	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.043	T	0.000	T	.	1.056	9.311	3.13	0.948	0.337	9.080	1.055521	NA	NA	0.825698	0.57172	NA	0.674	NA	6.2284686
1029	7	5036641	5036641	C	T	ncRNA_exonic	RNF216P1	NA	NA	NA	ncRNA_exonic	ENSG00000196204	NA	NA	NA	Score=551;Name=lod=231	NA	7p22.1	NA	Name=CTCF_(SC-5916),CTCF	NA	NA	rs9639892	0.52	0.52	0.531	0.498203	0.4384	0.6448	0.4265	0.4622	0.5082	0.45	0.68	0.47	0.5	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.47644	NA	NA	NA	NA	NA	0.435	NA	6.2282666
1029	19	6670094	6670094	G	A	UTR5	TNFSF14	NM_172014:c.-14C>T,NM_003807:c.-14C>T	NA	NA	UTR5	ENSG00000125735	ENST00000326176:c.-14C>T,ENST00000245912:c.-14C>T,ENST00000599359:c.-14C>T	NA	NA	NA	NA	19p13.3	NA	Name=Pol2-4H8,TBP,TCF12,c-Myc,IRF4_(M-17),Pol2,USF2,TAF1,CEBPB,Max	Name=15	NA	rs8112236	0.04	0.04	0.049	0.0379393	0.0288	NA	0.0245	0.1029	0.0082	0.03	NA	0.03	0.12	0.0326	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.980857	NA	NA	0.043837	0.083749	NA	0.159	NA	6.2280964
1029	5	149200043	149200043	T	C	exonic	PPARGC1B	NA	synonymous SNV	PPARGC1B:NM_001172698:exon2:c.T126C:p.L42L,PPARGC1B:NM_001172699:exon2:c.T51C:p.L17L,PPARGC1B:NM_133263:exon2:c.T126C:p.L42L	exonic	ENSG00000155846	NA	synonymous SNV	ENSG00000155846:ENST00000309241:exon2:c.T126C:p.L42L,ENSG00000155846:ENST00000360453:exon2:c.T126C:p.L42L,ENSG00000155846:ENST00000394320:exon2:c.T126C:p.L42L,ENSG00000155846:ENST00000403750:exon2:c.T51C:p.L17L	NA	NA	5q32	Score=671;Name=V$P53_01	NA	NA	NA	rs32588	0.17	0.17	0.18	0.202276	0.1372	0.0873	0.0937	0.3843	0.2188	0.13	0.08	0.1	0.38	0.1664	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.051326	NA	NA	0.135465	0.343622	ID=COSM149986;OCCURENCE=1(stomach)	0.196	NA	6.2276016
1029	18	67992279	67992279	G	A	exonic	SOCS6	NA	synonymous SNV	SOCS6:NM_004232:exon2:c.G375A:p.T125T	exonic	ENSG00000170677	NA	synonymous SNV	ENSG00000170677:ENST00000397942:exon2:c.G375A:p.T125T,ENSG00000170677:ENST00000578377:exon2:c.G375A:p.T125T,ENSG00000170677:ENST00000582322:exon2:c.G375A:p.T125T	NA	NA	18q22.2	Score=878;Name=V$ATF6_01	NA	NA	NA	rs2231562	0.12	0.12	0.134	0.0992412	0.163	0.0833	0.0922	0.0862	0.0726	0.16	0.07	0.1	0.12	0.1225	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.723585	NA	NA	0.153712	0.076941	NA	0.145	NA	6.2274546
1029	2	86756381	86756381	T	G	exonic	CHMP3,RNF103-CHMP3	NA	synonymous SNV	CHMP3:NM_001005753:exon2:c.A48C:p.A16A,CHMP3:NM_016079:exon3:c.A246C:p.A82A,RNF103-CHMP3:NM_001198954:exon5:c.A333C:p.A111A	exonic	ENSG00000115561,ENSG00000249884	NA	synonymous SNV	ENSG00000115561:ENST00000409225:exon2:c.A48C:p.A16A,ENSG00000115561:ENST00000263856:exon3:c.A246C:p.A82A,ENSG00000249884:ENST00000440757:exon4:c.A567C:p.A189A,ENSG00000115561:ENST00000439940:exon5:c.A333C:p.A111A,ENSG00000249884:ENST00000604011:exon5:c.A333C:p.A111A	NA	NA	2p11.2	Score=849;Name=V$OCT1_Q6	NA	NA	NA	rs11548929	0.15	0.15	0.147	0.141973	0.1402	NA	0.0879	0.3684	0.0225	0.14	NA	0.09	0.38	0.1354	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.332496	NA	NA	0.16407	0.338402	NA	0.203	NA	6.2269966
1029	5	78373431	78373431	C	T	exonic	BHMT2	NA	synonymous SNV	BHMT2:NM_001178005:exon2:c.C162T:p.D54D,BHMT2:NM_017614:exon2:c.C162T:p.D54D	exonic	ENSG00000132840	NA	nonsynonymous SNV	ENSG00000132840:ENST00000519743:exon3:c.C100T:p.R34C	Score=426;Name=lod=72	NA	5q14.1	Score=896;Name=V$AREB6_01	NA	NA	NA	rs682985	0.51	0.51	0.475	0.488219	0.5984	0.6042	0.6023	0.2398	0.5102	0.59	0.58	0.63	0.19	0.5679	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.778713	NA	NA	0.606977	0.29301	NA	0.42	NA	6.226723
1029	6	29894580	29894580	T	G	intergenic	HCG4B,HLA-A	dist=1152;dist=15667	NA	NA	ncRNA_exonic	ENSG00000227262,ENSG00000230795	NA	NA	NA	Score=309;Name=lod=24	NA	6p22.1	NA	Name=Pol2-4H8,AP-2gamma,NFKB	Name=99	NA	rs2571425	0.82	0.82	0.827	0.858826	0.7734	0.9236	0.8588	0.8676	0.8681	0.75	0.87	0.81	0.87	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.068322	NA	NA	NA	NA	NA	0.428	NA	6.2266
1029	16	28507644	28507644	C	G	exonic	APOBR	NA	nonsynonymous SNV	APOBR:NM_018690:exon2:c.C1282G:p.P428A	exonic	ENSG00000184730	NA	nonsynonymous SNV	ENSG00000184730:ENST00000564831:exon2:c.C1282G:p.P428A,ENSG00000184730:ENST00000328423:exon3:c.C1255G:p.P419A,ENSG00000184730:ENST00000431282:exon3:c.C1255G:p.P419A	NA	NA	16p11.2	NA	NA	NA	NA	rs180743	0.28	0.28	0.273	0.301118	0.3479	0.1042	0.4308	0.4107	0.2157	0.34	0.11	0.35	0.35	0.3697	0.41	0.86	T	.	.	.	.	.	.	1.000	P	.	.	0.99	T	-0.941	T	0.000	T	0.016	1.144	9.659	0.489	-0.054	-0.438	4.273	1.143564	NA	NA	0.389649	0.409296	ID=COSM148062;OCCURENCE=1(stomach)	0.239	NA	6.2260844
1029	8	17218629	17218629	G	A	exonic	MTMR7	NA	synonymous SNV	MTMR7:NM_004686:exon4:c.C465T:p.Y155Y	exonic	ENSG00000003987	NA	synonymous SNV	ENSG00000003987:ENST00000180173:exon4:c.C465T:p.Y155Y,ENSG00000003987:ENST00000521857:exon4:c.C465T:p.Y155Y	Score=536;Name=lod=201	NA	8p22	NA	NA	NA	NA	rs1024355	0.21	0.21	0.199	0.195687	0.1541	0.0655	0.134	0.4864	0.0235	0.15	0.09	0.13	0.47	0.1404	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.048176	NA	NA	0.146628	0.368134	ID=COSM150459;OCCURENCE=1(stomach)	0.188	NA	6.2255386
1029	18	56203120	56203120	C	T	exonic	ALPK2	NA	synonymous SNV	ALPK2:NM_052947:exon5:c.G4299A:p.G1433G	exonic	ENSG00000198796	NA	synonymous SNV	ENSG00000198796:ENST00000361673:exon5:c.G4299A:p.G1433G	NA	NA	18q21.32	NA	Name=TAF1,POU2F2,BCL11A,YY1_(C-20),ELF1_(SC-631),Oct-2,EBF1_(C-8),YY1,Pbx3,Pol2-4H8,PAX5-C20,TBP	Name=5	NA	rs3809981	0.38	0.38	0.352	0.329872	0.5308	0.2391	0.3847	0.2103	0.3395	0.54	0.24	0.45	0.23	0.4258	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.071968	NA	NA	0.485	0.259646	NA	0.457	NA	6.2250666
1029	9	215494	215494	C	T	UTR5	C9orf66	NM_152569:c.-98G>A	NA	NA	UTR5	ENSG00000183784	ENST00000382387:c.-98G>A	NA	NA	NA	NA	9p24.3	NA	Name=ZNF263	Name=8	NA	rs7869327	0.18	0.18	0.164	0.199281	0.1083	0.2649	0.2334	0.1853	0.2198	0.11	0.22	0.2	0.22	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.801394	NA	NA	NA	NA	NA	0.29	NA	6.2250334
1029	20	36770588	36770588	C	T	exonic	TGM2	NA	synonymous SNV	TGM2:NM_004613:exon7:c.G873A:p.L291L,TGM2:NM_198951:exon7:c.G873A:p.L291L	exonic	ENSG00000198959	NA	synonymous SNV	ENSG00000198959:ENST00000536701:exon6:c.G630A:p.L210L,ENSG00000198959:ENST00000536724:exon6:c.G693A:p.L231L,ENSG00000198959:ENST00000361475:exon7:c.G873A:p.L291L	NA	NA	20q11.23	Score=671;Name=V$P53_01	NA	NA	NA	rs2076390	0.2	0.2	0.193	0.202077	0.1392	0.2718	0.1196	0.2141	0.2372	0.15	0.31	0.12	0.2	0.162	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.42901	NA	NA	0.140465	0.18906	NA	0.21	NA	6.2250016
1030	9	125143792	125143792	C	A	exonic	PTGS1	NA	synonymous SNV	PTGS1:NM_001271164:exon5:c.C495A:p.G165G,PTGS1:NM_001271165:exon5:c.C312A:p.G104G,PTGS1:NM_000962:exon6:c.C639A:p.G213G,PTGS1:NM_001271166:exon6:c.C312A:p.G104G,PTGS1:NM_001271367:exon6:c.C312A:p.G104G,PTGS1:NM_080591:exon6:c.C639A:p.G213G,PTGS1:NM_001271368:exon7:c.C564A:p.G188G	exonic	ENSG00000095303	NA	synonymous SNV	ENSG00000095303:ENST00000426608:exon4:c.C321A:p.G107G,ENSG00000095303:ENST00000373698:exon5:c.C312A:p.G104G,ENSG00000095303:ENST00000223423:exon6:c.C639A:p.G213G,ENSG00000095303:ENST00000362012:exon6:c.C639A:p.G213G,ENSG00000095303:ENST00000540753:exon7:c.C564A:p.G188G	Score=545;Name=lod=218	NA	9q33.2	NA	NA	NA	NA	rs5788	0.24	0.24	0.267	0.270767	0.1402	0.0407	0.2406	0.6876	0.1002	0.13	0.05	0.23	0.65	0.1701	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.066609	NA	NA	0.131395	0.592828	ID=COSM150696;OCCURENCE=1(stomach)	0.312	NA	6.2249716
1030	9	104309445	104309445	T	C	exonic	RNF20	NA	synonymous SNV	RNF20:NM_019592:exon8:c.T921C:p.Y307Y	exonic	ENSG00000155827	NA	synonymous SNV	ENSG00000155827:ENST00000389120:exon8:c.T921C:p.Y307Y	Score=389;Name=lod=51	NA	9q31.1	NA	NA	NA	NA	rs2273976	0.13	0.13	0.113	0.110024	0.1461	0.1111	0.1513	0.0847	0.0767	0.15	0.12	0.16	0.08	0.1343	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.825141	NA	NA	0.161512	0.099183	NA	0.145	NA	6.2247546
1030	20	279483	279483	T	C	UTR3	ZCCHC3	NM_033089:c.*41T>C	NA	NA	ncRNA_exonic	ENSG00000247315	NA	NA	NA	Score=481;Name=lod=120	NA	20p13	NA	Name=Pol2-4H8,Pol2,Mxi1_(bHLH)	Name=147	NA	rs1046560	0.47	0.47	0.476	0.446685	0.4036	0.6617	0.3545	0.3873	0.4151	0.43	0.65	0.35	0.41	0.4457	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.371807	2.371807	NA	0.426002	0.3864	NA	0.406	NA	6.224698
1030	2	37230734	37230734	C	T	exonic	HEATR5B	NA	synonymous SNV	HEATR5B:NM_019024:exon31:c.G5001A:p.Q1667Q	exonic	ENSG00000008869	NA	synonymous SNV	ENSG00000008869:ENST00000233099:exon31:c.G5001A:p.Q1667Q,ENSG00000008869:ENST00000354531:exon31:c.G5001A:p.Q1667Q	Score=595;Name=lod=348	NA	2p22.2	NA	NA	NA	NA	rs17497654	0.14	0.14	0.144	0.130192	0.1461	0.0238	0.1326	0.2345	0.0808	0.13	0.02	0.17	0.28	0.1331	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.840902	NA	NA	0.162907	0.209033	NA	0.174	NA	6.2245596
1030	19	7569282	7569282	A	G	exonic	C19orf45	NA	nonsynonymous SNV	C19orf45:NM_198534:exon4:c.A767G:p.D256G	exonic	ENSG00000198723	NA	nonsynonymous SNV	ENSG00000198723:ENST00000361664:exon4:c.A767G:p.D256G	NA	NA	19p13.2	NA	NA	NA	NA	rs484870	0.38	0.38	0.382	0.348442	0.3837	0.1736	0.4006	0.4992	0.2515	0.39	0.19	0.43	0.52	0.3499	0.52	1	T	0.0	B	0.0	B	0.512	N	1.000	P	-0.55	N	2.55	T	-0.957	T	0.000	T	0.02	-1.348	0.029	-1.82	-0.612	0.063	4.487	-1.348313	NA	0.86	0.375349	0.472537	NA	0.442	NA	6.2243844
1030	7	66648199	66648199	G	A	exonic	TYW1	NA	synonymous SNV	TYW1:NM_018264:exon14:c.G1785A:p.G595G	exonic	ENSG00000198874	NA	synonymous SNV	ENSG00000198874:ENST00000359626:exon14:c.G1785A:p.G595G	NA	NA	7q11.21	NA	NA	Name=15	NA	rs7776775	0.21	0.21	0.142	NA	NA	NA	NA	NA	NA	0.21	0.08	0.23	0.36	0.2354	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.800189	NA	NA	0.2078	0.282796	NA	0.014	NA	6.2234666
1030	11	67566898	67566898	C	T	ncRNA_intronic	FAM86C2P	NA	NA	NA	ncRNA_exonic	ENSG00000160172	NA	NA	NA	Score=470;Name=lod=108	NA	11q13.2	Score=737;Name=V$NRSF_01	NA	NA	NA	rs76473208	0.43	0.43	0.45	0.428315	0.4433	0.6319	0.5663	0.0787	0.5777	0.44	0.63	0.52	0.1	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.253675	NA	0.03	NA	NA	NA	0.174	NA	6.2233666
1030	17	6981397	6981397	A	G	exonic	CLEC10A	NA	nonsynonymous SNV	CLEC10A:NM_006344:exon3:c.T103C:p.C35R,CLEC10A:NM_182906:exon3:c.T103C:p.C35R	exonic	ENSG00000132514	NA	nonsynonymous SNV	ENSG00000132514:ENST00000254868:exon3:c.T103C:p.C35R,ENSG00000132514:ENST00000416562:exon3:c.T103C:p.C35R,ENSG00000132514:ENST00000571664:exon3:c.T103C:p.C35R,ENSG00000132514:ENST00000576617:exon3:c.T103C:p.C35R	NA	NA	17p13.1	NA	NA	NA	NA	rs90951	0.51	0.51	0.542	0.519968	0.3608	0.4702	0.3473	0.9266	0.3078	0.36	0.49	0.33	0.9	0.3944	0.9	0.19	T	0.003	B	0.036	B	0.282	N	1.000	P	0.925	L	2.05	T	-1.072	T	0.000	T	0.018	0.74	7.93	-0.382	-0.472	0.674	8.741	0.740365	NA	0.14	0.355	0.818883	NA	0.442	NA	6.2231334
1030	2	20101717	20101717	A	G	UTR5	TTC32	NM_001008237:c.-102T>C	NA	NA	UTR5	ENSG00000183891	ENST00000402414:c.-102T>C,ENST00000333610:c.-102T>C	NA	NA	NA	NA	2p24.1	NA	Name=EBF1_(C-8),p300,CHD2_(N-1250),IRF1,GTF2F1_(RAP-74),TBP,HEY1,NFKB,ELF1_(SC-631),STAT1,c-Myc,Max,Oct-2,SETDB1,PAX5-C20,PAX5-N19,Ini1,TCF4,NRSF,Pol2,IRF4_(M-17),eGFP-JunD,GATA-2,Pol2-4H8,KAP1,HA-E2F1,YY1_(C-20),BRCA1_(C-1863),Sin3Ak-20,AP-2alpha,ETS1,Pol2(b),TAF1,GATA-1,FOSL2,ZBTB33,POU2F2,E2F4	Name=148	NA	rs2304588	0.11	0.11	0.093	0.124201	0.1113	0.1746	0.1225	0.0197	0.228	0.11	0.17	0.12	0.03	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.634282	NA	NA	NA	NA	ID=COSN166029;OCCURENCE=1(breast)	0.087	NA	6.2220334
1030	13	32360583	32360583	A	G	exonic	RXFP2	NA	synonymous SNV	RXFP2:NM_001166058:exon11:c.A921G:p.L307L,RXFP2:NM_130806:exon12:c.A993G:p.L331L	exonic	ENSG00000133105	NA	synonymous SNV	ENSG00000133105:ENST00000380314:exon11:c.A921G:p.L307L,ENSG00000133105:ENST00000298386:exon12:c.A993G:p.L331L	Score=422;Name=lod=69	NA	13q13.1	NA	NA	NA	NA	rs9549106	0.15	0.15	0.115	0.135383	0.1551	0.1905	0.1657	0.0855	0.1043	0.15	0.19	0.15	0.1	0.147	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.668398	NA	NA	0.142674	0.126192	NA	0.13	NA	6.2218926
1030	15	100636586	100636586	G	A	exonic	ADAMTS17	NA	synonymous SNV	ADAMTS17:NM_139057:exon15:c.C2112T:p.G704G	exonic	ENSG00000140470	NA	synonymous SNV	ENSG00000140470:ENST00000268070:exon15:c.C2112T:p.G704G	Score=569;Name=lod=275	NA	15q26.3	NA	NA	NA	NA	rs4965583	0.28	0.28	0.251	0.263778	0.1262	0.5	0.2925	0.2504	0.1595	0.13	0.53	0.25	0.24	0.1877	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.979603	NA	NA	0.131047	0.233318	NA	0.196	NA	6.2217196
1030	2	185802363	185802363	A	G	exonic	ZNF804A	NA	nonsynonymous SNV	ZNF804A:NM_194250:exon4:c.A2240G:p.H747R	exonic	ENSG00000170396	NA	nonsynonymous SNV	ENSG00000170396:ENST00000302277:exon4:c.A2240G:p.H747R	NA	NA	2q32.1	NA	NA	NA	NA	rs12477430	0.74	0.74	0.741	0.704273	0.6889	0.8671	0.7507	0.6157	0.6391	0.71	0.89	0.74	0.63	0.7139	0.89	0.4	T	0.0	B	0.0	B	0.994	N	1.000	P	-0.69	N	3.47	T	-1.048	T	0.000	T	0.004	-0.596	1.335	2.05	-0.093	0.078	9.824	-0.595664	NA	0.27	0.709002	0.637086	NA	0.768	NA	6.2215314
1030	3	53905308	53905308	T	C	exonic	ACTR8	NA	synonymous SNV	ACTR8:NM_022899:exon11:c.A1518G:p.G506G	exonic	ENSG00000113812	NA	synonymous SNV	ENSG00000113812:ENST00000231909:exon6:c.A633G:p.G211G,ENSG00000113812:ENST00000335754:exon11:c.A1518G:p.G506G,ENSG00000113812:ENST00000482349:exon11:c.A1185G:p.G395G	NA	NA	3p21.1	NA	NA	NA	NA	rs1046677	0.67	0.67	0.657	0.692292	0.4523	0.9444	0.6196	0.7186	0.6953	0.43	0.95	0.62	0.74	0.5546	0.95	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.029	T	0.000	T	.	1.138	9.636	-2.54	-0.796	-0.016	7.843	1.137708	NA	NA	0.438488	0.67567	NA	0.674	NA	6.2212786
1030	10	87898729	87898729	G	A	exonic	GRID1	NA	synonymous SNV	GRID1:NM_017551:exon4:c.C573T:p.D191D	exonic	ENSG00000182771	NA	synonymous SNV	ENSG00000182771:ENST00000327946:exon4:c.C573T:p.D191D,ENSG00000182771:ENST00000464741:exon4:c.C573T:p.D191D	NA	NA	10q23.1	Score=798;Name=V$FREAC4_01	NA	NA	NA	rs17106320	0.15	0.15	0.155	0.180911	0.1531	0.0893	0.1715	0.2579	0.2065	0.14	0.07	0.2	0.24	0.1483	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.680552	NA	NA	0.145116	0.24966	NA	0.21	NA	6.2201506
1030	2	217148417	217148417	C	A	exonic	MARCH4	NA	synonymous SNV	MARCH4:NM_020814:exon2:c.G552T:p.S184S	exonic	ENSG00000144583	NA	synonymous SNV	ENSG00000144583:ENST00000273067:exon2:c.G552T:p.S184S	NA	NA	2q35	NA	Name=KAP1,YY1_(C-20),SMC3_(ab9263),NANOG_(SC-33759),CTCF_(SC-5916),CTCF,CTCF_(C-20),Rad21	Name=29	NA	rs876771	0.43	0.43	0.415	0.435903	0.493	0.4345	0.4308	0.3147	0.546	0.49	0.44	0.42	0.32	0.4719	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.099651	NA	NA	0.48186	0.329778	NA	0.471	NA	6.2199066
1030	6	29855901	29855901	A	G	ncRNA_exonic	HLA-H	NA	NA	NA	ncRNA_exonic	ENSG00000206341,ENSG00000230521	NA	NA	NA	Score=358;Name=lod=38	NA	6p22.1	NA	Name=Pol2-4H8,Pol2,NFKB,CTCF	Name=64	NA	rs1059453	0.68	0.68	0.672	0.704473	0.7366	0.6062	0.7738	0.733	0.6851	0.71	0.54	0.7	0.79	0.7105	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.523754	NA	NA	NA	NA	NA	0.486	NA	6.2195666
1030	10	86151141	86151141	C	G	intronic	CCSER2	NA	NA	NA	ncRNA_exonic	ENSG00000225423	NA	NA	NA	Score=728;Name=lod=1210	NA	10q23.1	NA	NA	Name=18	NA	rs17342019	0.07	0.07	0.071	0.0820687	0.1143	0.0774	0.0634	0.003	0.1738	0.11	0.06	0.07	0.0041	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.250224	NA	NA	NA	NA	NA	0.109	NA	6.2190333
1030	6	33172442	33172442	C	T	UTR5	HSD17B8	NM_014234:c.-4C>T	NA	NA	UTR5	ENSG00000204228	ENST00000374662:c.-4C>T	NA	NA	NA	NA	6p21.32	NA	Name=Egr-1,YY1,TCF4,Pol2(phosphoS2),SP1,RFX5_(N-494),Pol2,Pol2-4H8,c-Fos,Sin3Ak-20,YY1_(C-20),SP2_(SC-643),NF-YA,E2F6_(H-50),FOSL2,TAF1,HMGN3,E2F4,Nrf1,THAP1_(SC-98174),IRF1,TBP,HEY1,CCNT2,NF-YB	Name=145	NA	rs150495100	0.03	0.03	0.026	0.0301518	0.0368	0.0129	0.0288	0.0257	0.0481	0.03	0.02	0.04	0.03	0.0379	0.054	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.04572	NA	NA	0.040975	0.035833	NA	0.08	NA	6.2176584
1030	3	179051472	179051472	A	G	exonic	ZNF639	NA	synonymous SNV	ZNF639:NM_016331:exon7:c.A720G:p.E240E	exonic	ENSG00000121864	NA	synonymous SNV	ENSG00000121864:ENST00000484866:exon5:c.A720G:p.E240E,ENSG00000121864:ENST00000466264:exon6:c.A720G:p.E240E,ENSG00000121864:ENST00000496856:exon6:c.A720G:p.E240E,ENSG00000121864:ENST00000326361:exon7:c.A720G:p.E240E	Score=524;Name=lod=179	NA	3q26.33	NA	NA	NA	NA	rs35983049	0.1	0.1	0.104	0.0880591	0.165	0.0714	0.0879	0.0643	0.0583	0.16	0.08	0.09	0.07	0.1217	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.209055	NA	NA	0.162558	0.080572	NA	0.072	NA	6.2174086
1030	5	132232315	132232315	G	A	exonic	AFF4	NA	synonymous SNV	AFF4:NM_014423:exon11:c.C2007T:p.P669P	exonic	ENSG00000072364	NA	synonymous SNV	ENSG00000072364:ENST00000265343:exon11:c.C2007T:p.P669P,ENSG00000072364:ENST00000378595:exon11:c.C2007T:p.P669P	Score=766;Name=lod=1724	NA	5q31.1	NA	NA	NA	NA	rs739863	0.1	0.1	0.088	0.105232	0.1451	0.1141	0.0937	0.0144	0.1861	0.15	0.12	0.11	0.02	0.1451	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.400284	NA	NA	0.159302	0.036541	NA	0.13	NA	6.2171646
1030	7	142498837	142498837	C	T	intergenic	PRSS3P2,EPHB6	dist=16438;dist=53955	NA	NA	exonic	ENSG00000211772	NA	unknown	UNKNOWN	NA	NA	7q34	Score=865;Name=V$USF_01	Name=E2F6_(H-50),USF-1,THAP1_(SC-98174)	Name=7	NA	rs1042957	NA	NA	0.376	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4844	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.20932	NA	NA	0.465797	0.208217	NA	0.13	NA	6.2164697
1030	13	52313195	52313195	C	T	exonic	WDFY2	NA	synonymous SNV	WDFY2:NM_052950:exon7:c.C609T:p.T203T	exonic	ENSG00000139668	NA	synonymous SNV	ENSG00000139668:ENST00000298125:exon7:c.C609T:p.T203T	NA	NA	13q14.3	Score=919;Name=V$SREBP1_02	NA	NA	NA	rs1885854	0.11	0.11	0.099	0.125399	0.1531	0.1706	0.0937	0.0045	0.2362	0.16	0.14	0.09	0.01	0.1404	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.647075	NA	NA	0.156977	0.032229	NA	0.08	NA	6.2161896
1030	1	230384970	230384970	G	A	exonic	GALNT2	NA	synonymous SNV	GALNT2:NM_004481:exon9:c.G858A:p.T286T	exonic	ENSG00000143641	NA	synonymous SNV	ENSG00000143641:ENST00000541865:exon8:c.G588A:p.T196T,ENSG00000143641:ENST00000366672:exon9:c.G858A:p.T286T,ENSG00000143641:ENST00000543760:exon9:c.G744A:p.T248T	NA	NA	1q42.13	Score=859;Name=V$E4BP4_01	NA	NA	NA	rs1923950	0.12	0.12	0.124	0.110024	0.1511	0.0942	0.0749	0.0961	0.1278	0.17	0.12	0.08	0.08	0.14	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.012498	NA	NA	0.159419	0.099183	NA	0.087	NA	6.2161476
1030	13	41515371	41515371	C	T	exonic	ELF1	NA	synonymous SNV	ELF1:NM_001145353:exon7:c.G870A:p.S290S,ELF1:NM_172373:exon8:c.G942A:p.S314S	exonic	ENSG00000120690	NA	synonymous SNV	ENSG00000120690:ENST00000442101:exon7:c.G870A:p.S290S,ENSG00000120690:ENST00000239882:exon8:c.G942A:p.S314S	NA	NA	13q14.11	Score=974;Name=V$GATA6_01	NA	NA	NA	rs7987185	0.14	0.14	0.135	0.132388	0.1362	0.0843	0.1282	0.2209	0.0613	0.13	0.09	0.17	0.2	0.1422	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.466388	NA	NA	0.172791	0.220835	NA	0.159	NA	6.2154756
1030	12	3788260	3788260	G	A	exonic	EFCAB4B	NA	synonymous SNV	EFCAB4B:NM_001144958:exon6:c.C345T:p.H115H,EFCAB4B:NM_032680:exon6:c.C345T:p.H115H	exonic	ENSG00000130038	NA	synonymous SNV	ENSG00000130038:ENST00000252322:exon6:c.C345T:p.H115H,ENSG00000130038:ENST00000440314:exon6:c.C345T:p.H115H,ENSG00000130038:ENST00000444507:exon6:c.C345T:p.H115H	Score=419;Name=lod=67	NA	12p13.32	NA	NA	NA	NA	rs242016	0.09	0.09	0.079	0.0716853	0.1531	0.004	0.111	0.0461	0.0644	0.16	NA	0.12	0.04	0.1271	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.753106	NA	NA	0.171047	0.060145	NA	0.087	NA	6.2154196
1030	11	118471423	118471423	T	C	exonic	ARCN1	NA	synonymous SNV	ARCN1:NM_001142281:exon9:c.T1266C:p.I422I,ARCN1:NM_001655:exon10:c.T1530C:p.I510I	exonic	ENSG00000095139	NA	synonymous SNV	ENSG00000095139:ENST00000392859:exon9:c.T1266C:p.I422I,ENSG00000095139:ENST00000264028:exon10:c.T1530C:p.I510I,ENSG00000095139:ENST00000359415:exon11:c.T1653C:p.I551I	Score=601;Name=lod=369	NA	11q23.3	NA	NA	NA	NA	rs11216925	0.24	0.24	0.222	0.280351	0.1372	0.5813	0.0821	0.2065	0.3579	0.14	0.53	0.09	0.19	0.1869	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.082158	NA	NA	0.127241	0.190455	NA	0.196	NA	6.2153256
1031	14	94466081	94466081	C	G	ncRNA_intronic	LINC00521	NA	NA	NA	ncRNA_intronic	ENSG00000175699	NA	NA	NA	NA	NA	14q32.12	NA	Name=CTCF,Rad21,SMC3_(ab9263),c-Myc,CTCF_(C-20),EBF,FOXA1_(C-20)	Name=14	NA	rs4905137	0.68	0.68	0.658	0.680711	0.4523	0.9782	0.6138	0.733	0.5859	0.47	0.98	0.61	0.72	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.280398	NA	NA	NA	NA	NA	0.594	NA	6.2143666
1031	19	17885880	17885880	C	T	exonic	FCHO1	NA	synonymous SNV	FCHO1:NM_001161359:exon12:c.C786T:p.P262P,FCHO1:NM_001161358:exon13:c.C936T:p.P312P,FCHO1:NM_001161357:exon14:c.C936T:p.P312P,FCHO1:NM_015122:exon14:c.C936T:p.P312P	exonic	ENSG00000130475	NA	synonymous SNV	ENSG00000130475:ENST00000597512:exon10:c.C957T:p.P319P,ENSG00000130475:ENST00000252771:exon12:c.C936T:p.P312P,ENSG00000130475:ENST00000389133:exon12:c.C936T:p.P312P,ENSG00000130475:ENST00000595033:exon12:c.C786T:p.P262P,ENSG00000130475:ENST00000596951:exon12:c.C936T:p.P312P,ENSG00000130475:ENST00000539407:exon13:c.C936T:p.P312P,ENSG00000130475:ENST00000600676:exon13:c.C936T:p.P312P,ENSG00000130475:ENST00000594202:exon14:c.C936T:p.P312P,ENSG00000130475:ENST00000596536:exon14:c.C936T:p.P312P	NA	NA	19p13.11	Score=861;Name=V$STAT5B_01	NA	NA	NA	rs2287855	0.1	0.1	0.088	0.0944489	0.174	0.0337	0.1369	0.059	0.093	0.17	0.01	0.13	0.05	0.1336	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.02181	NA	NA	0.144767	0.077394	NA	0.188	NA	6.2142996
1031	5	162940999	162940999	A	G	exonic	MAT2B	NA	synonymous SNV	MAT2B:NM_013283:exon4:c.A525G:p.L175L,MAT2B:NM_182796:exon4:c.A492G:p.L164L	exonic	ENSG00000038274	NA	synonymous SNV	ENSG00000038274:ENST00000421814:exon3:c.A330G:p.L110L,ENSG00000038274:ENST00000280969:exon4:c.A492G:p.L164L,ENSG00000038274:ENST00000321757:exon4:c.A525G:p.L175L,ENSG00000038274:ENST00000518095:exon4:c.A525G:p.L175L	Score=551;Name=lod=232	NA	5q34	NA	NA	NA	NA	rs11546512	0.09	0.09	0.089	0.081869	0.17	0.0129	0.0836	0.0371	0.1217	0.17	0.01	0.11	0.04	0.1314	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.695918	1.695918	NA	0.151512	0.054244	NA	0.08	NA	6.2137546
1031	11	5372881	5372881	G	A	exonic	OR51B6	NA	synonymous SNV	OR51B6:NM_001004750:exon1:c.G144A:p.R48R	exonic	ENSG00000176239	NA	synonymous SNV	ENSG00000176239:ENST00000380219:exon1:c.G144A:p.R48R	NA	NA	11p15.4	Score=866;Name=V$BRN2_01	NA	NA	NA	rs77135024	0.12	0.12	0.098	0.105631	0.1541	0.0754	0.1614	0.0303	0.1493	0.17	0.09	0.16	0.05	0.1466	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.588012	NA	NA	0.152316	0.054748	NA	0.167	NA	6.2136506
1031	10	72179746	72179746	C	T	exonic	EIF4EBP2	NA	synonymous SNV	EIF4EBP2:NM_004096:exon2:c.C222T:p.H74H	exonic	ENSG00000148730	NA	synonymous SNV	ENSG00000148730:ENST00000373218:exon2:c.C222T:p.H74H	Score=636;Name=lod=513	NA	10q22.1	Score=965;Name=V$MYOD_Q6	NA	NA	NA	rs1043098	0.53	0.53	0.506	0.51278	0.4612	0.7272	0.4712	0.4266	0.4908	0.48	0.71	0.49	0.42	0.5027	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.062956	NA	NA	0.489884	0.421698	NA	0.5	NA	6.2128826
1031	1	152327469	152327469	C	T	exonic	FLG2	NA	synonymous SNV	FLG2:NM_001014342:exon3:c.G2793A:p.Q931Q	exonic	ENSG00000143520	NA	synonymous SNV	ENSG00000143520:ENST00000388718:exon3:c.G2793A:p.Q931Q	NA	NA	1q21.3	Score=848;Name=V$HAND1E47_01	NA	NA	NA	rs76514540	0.21	0.21	0.15	0.239617	0.1372	0.4534	0.3804	0.0159	0.3272	0.12	0.43	0.31	0.01	0.1833	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.457342	NA	NA	0.133488	0.028143	NA	0.087	NA	6.2126786
1031	16	16271409	16271409	G	A	exonic	ABCC6	NA	synonymous SNV	ABCC6:NM_001171:exon19:c.C2490T:p.A830A	exonic	ENSG00000091262	NA	synonymous SNV	ENSG00000091262:ENST00000205557:exon19:c.C2490T:p.A830A	Score=516;Name=lod=167	NA	16p13.11	NA	NA	NA	NA	rs9924755	0.16	0.16	0.178	0.151558	0.1581	0.0744	0.1657	0.2723	0.0511	0.16	0.08	0.16	0.25	0.1395	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.182846	NA	NA	0.156628	0.249886	NA	0.159	NA	6.2124386
1031	19	3155902	3155902	G	A	exonic	GNA15	NA	synonymous SNV	GNA15:NM_002068:exon5:c.G696A:p.L232L	exonic	ENSG00000060558	NA	synonymous SNV	ENSG00000060558:ENST00000262958:exon5:c.G696A:p.L232L	Score=612;Name=lod=410	NA	19p13.3	NA	NA	NA	NA	rs2074865	0.3	0.3	0.283	0.327276	0.1153	0.5377	0.3573	0.2572	0.4018	0.12	0.56	0.31	0.27	0.2319	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.174981	NA	NA	0.107209	0.267136	ID=COSM148454;OCCURENCE=1(stomach)	0.283	NA	6.2122576
1031	20	47630449	47630449	C	T	exonic	ARFGEF2	NA	synonymous SNV	ARFGEF2:NM_006420:exon30:c.C4131T:p.I1377I	exonic	ENSG00000124198	NA	synonymous SNV	ENSG00000124198:ENST00000371917:exon30:c.C4131T:p.I1377I	NA	NA	20q13.13	NA	NA	NA	NA	rs2281582	0.21	0.21	0.186	0.208466	0.1282	0.3938	0.2767	0.0416	0.2771	0.14	0.42	0.23	0.06	0.1899	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.103975	NA	NA	0.13686	0.0665	ID=COSM149194;OCCURENCE=1(stomach)	0.232	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116403.2;CLNDSDB=.;CLNDSDBID=.	6.2117066
1031	16	84211465	84211465	T	C	UTR3	DNAAF1,TAF1C	NM_178452:c.*18T>C;NM_001243159:c.*1082A>G,NM_001243158:c.*1082A>G,NM_005679:c.*1082A>G,NM_001243157:c.*1082A>G,NM_001243156:c.*1082A>G,NM_139353:c.*1082A>G,NM_001243160:c.*1082A>G	NA	NA	UTR3	ENSG00000103168,ENSG00000154099	ENST00000341690:c.*1082A>G,ENST00000567759:c.*1082A>G,ENST00000541676:c.*1082A>G,ENST00000378541:c.*1082A>G;ENST00000378553:c.*18T>C,ENST00000569735:c.*18T>C	NA	NA	NA	NA	16q24.1	NA	Name=c-Myc,c-Fos,Egr-1	Name=85	NA	rs2288024	0.03	0.03	0.026	0.0257588	0.0447	0.0456	0.0288	0.003	0.0143	0.04	0.04	0.02	0.01	0.0329	0.045	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.124348	NA	NA	0.044651	0.007273	NA	0.022	NA	6.2110824
1031	6	7339371	7339371	C	T	intronic	CAGE1	NA	NA	NA	ncRNA_exonic	ENSG00000220472	NA	NA	NA	Score=797;Name=lod=2322	NA	6p24.3	NA	Name=YY1_(C-20),TAF1,CTCF	NA	NA	rs13216713	0.17	0.17	0.172	0.159545	0.1223	0.3046	0.232	0.0514	0.1431	0.1	0.34	0.21	0.06	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.192119	NA	NA	NA	NA	NA	0.145	NA	6.2110333
1031	3	132401600	132401600	C	T	exonic	NPHP3	NA	synonymous SNV	NPHP3:NM_153240:exon26:c.G3759A:p.L1253L	exonic	ENSG00000113971	NA	synonymous SNV	ENSG00000113971:ENST00000337331:exon26:c.G3759A:p.L1253L	Score=605;Name=lod=384	NA	3q22.1	NA	NA	NA	NA	rs6794496	0.24	0.24	0.236	0.223243	0.159	0.5714	0.0706	0.0923	0.2157	0.16	0.58	0.07	0.1	0.1639	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.79876	NA	NA	0.132791	0.114163	NA	0.217	NA	6.2109756
1031	21	38308911	38308911	G	A	exonic	HLCS	NA	synonymous SNV	HLCS:NM_000411:exon5:c.C834T:p.S278S,HLCS:NM_001242784:exon5:c.C834T:p.S278S,HLCS:NM_001242785:exon5:c.C834T:p.S278S	exonic	ENSG00000159267	NA	synonymous SNV	ENSG00000159267:ENST00000336648:exon5:c.C834T:p.S278S,ENSG00000159267:ENST00000399120:exon5:c.C834T:p.S278S	NA	NA	21q22.13	NA	NA	NA	NA	rs1065758	0.09	0.09	0.096	0.0712859	0.172	0.0417	0.0821	0.031	0.045	0.17	0.05	0.08	0.02	0.1208	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.856532	NA	NA	0.163605	0.054925	NA	0.094	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000078724.3;CLNDSDB=.;CLNDSDBID=.	6.2102616
1031	19	42354629	42354629	T	C	exonic	DMRTC2	NA	synonymous SNV	DMRTC2:NM_001040283:exon8:c.T852C:p.G284G	exonic	ENSG00000142025	NA	synonymous SNV	ENSG00000142025:ENST00000596827:exon7:c.T1005C:p.G335G,ENSG00000142025:ENST00000269945:exon8:c.T852C:p.G284G	Score=496;Name=lod=138	NA	19q13.2	Score=923;Name=V$TAL1ALPHAE47_01,V$TAL1BETAITF2_01	NA	NA	NA	rs2305809	0.6	0.6	0.602	0.608427	0.4702	0.5258	0.572	0.916	0.4458	0.48	0.56	0.52	0.89	0.5079	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.040361	NA	NA	0.478372	0.834317	NA	0.594	NA	6.2101946
1031	19	46352122	46352122	A	G	exonic	SYMPK	NA	synonymous SNV	SYMPK:NM_004819:exon6:c.T312C:p.I104I	exonic	ENSG00000125755	NA	synonymous SNV	ENSG00000125755:ENST00000600237:exon5:c.T312C:p.I104I,ENSG00000125755:ENST00000245934:exon6:c.T312C:p.I104I,ENSG00000125755:ENST00000598059:exon6:c.T312C:p.I104I,ENSG00000125755:ENST00000602061:exon6:c.T312C:p.I104I,ENSG00000125755:ENST00000594293:exon7:c.T312C:p.I104I	Score=674;Name=lod=734	NA	19q13.32	NA	NA	NA	NA	rs2303014	0.12	0.12	0.1	0.123602	0.1581	0.0952	0.2233	0.031	0.1718	0.16	0.09	0.19	0.02	0.1507	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.320546	1.320546	NA	0.147674	0.05379	NA	0.051	NA	6.2101926
1031	2	170103336	170103336	T	C	exonic	LRP2	NA	synonymous SNV	LRP2:NM_004525:exon21:c.A3069G:p.T1023T	exonic	ENSG00000081479	NA	synonymous SNV	ENSG00000081479:ENST00000443831:exon19:c.A2658G:p.T886T,ENSG00000081479:ENST00000263816:exon21:c.A3069G:p.T1023T	NA	NA	2q31.1	Score=801;Name=V$CDPCR3_01	NA	NA	NA	rs831043	0.54	0.54	0.495	0.61861	0.4622	0.4792	0.6369	0.7201	0.773	0.46	0.46	0.62	0.69	0.5385	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.051052	NA	NA	0.45593	0.691557	NA	0.616	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117524.2;CLNDSDB=.;CLNDSDBID=.	6.2100366
1031	1	181706685	181706685	C	T	exonic	CACNA1E	NA	synonymous SNV	CACNA1E:NM_001205294:exon22:c.C3390T:p.I1130I,CACNA1E:NM_000721:exon23:c.C3447T:p.I1149I,CACNA1E:NM_001205293:exon23:c.C3447T:p.I1149I	exonic	ENSG00000198216	NA	synonymous SNV	ENSG00000198216:ENST00000358338:exon22:c.C3243T:p.I1081I,ENSG00000198216:ENST00000360108:exon22:c.C3390T:p.I1130I,ENSG00000198216:ENST00000526775:exon22:c.C3390T:p.I1130I,ENSG00000198216:ENST00000357570:exon23:c.C3300T:p.I1100I,ENSG00000198216:ENST00000367567:exon23:c.C2268T:p.I756I,ENSG00000198216:ENST00000367570:exon23:c.C3447T:p.I1149I,ENSG00000198216:ENST00000367573:exon23:c.C3447T:p.I1149I	Score=620;Name=lod=441	NA	1q25.3	NA	NA	NA	NA	rs34488539	0.16	0.16	0.152	0.183107	0.159	0.0506	0.1513	0.2587	0.2648	0.16	0.04	0.17	0.27	0.1545	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.384235	1.384235	NA	0.14333	0.206758	NA	0.123	NA	6.2098366
1031	16	53262964	53262964	C	T	exonic	CHD9	NA	synonymous SNV	CHD9:NM_025134:exon8:c.C2238T:p.I746I	exonic	ENSG00000177200	NA	synonymous SNV	ENSG00000177200:ENST00000398510:exon7:c.C2238T:p.I746I,ENSG00000177200:ENST00000565803:exon7:c.C816T:p.I272I,ENSG00000177200:ENST00000447540:exon8:c.C2238T:p.I746I,ENSG00000177200:ENST00000564845:exon8:c.C2238T:p.I746I,ENSG00000177200:ENST00000566029:exon8:c.C2238T:p.I746I	Score=686;Name=lod=822	NA	16q12.2	NA	NA	NA	NA	rs35198193	0.14	0.14	0.143	0.135982	0.1282	0.1944	0.0533	0.0658	0.2372	0.13	0.24	0.07	0.1	0.2035	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.164958	NA	NA	0.125245	0.071152	NA	0.109	NA	6.2097216
1031	14	79181226	79181226	C	T	exonic	NRXN3	NA	synonymous SNV	NRXN3:NM_004796:exon5:c.C669T:p.T223T	exonic	ENSG00000021645	NA	synonymous SNV	ENSG00000021645:ENST00000335750:exon5:c.C669T:p.T223T,ENSG00000021645:ENST00000554719:exon5:c.C669T:p.T223T,ENSG00000021645:ENST00000554738:exon7:c.C1782T:p.T594T	NA	NA	14q24.3	Score=980;Name=V$MZF1_01	NA	NA	NA	rs1004212	0.17	0.17	0.177	0.196486	0.1471	0.0625	0.1066	0.3366	0.2597	0.16	0.06	0.12	0.35	0.164	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.920476	NA	NA	0.14686	0.294598	NA	0.283	NA	6.2087066
1031	17	15690888	15690888	C	G	ncRNA_exonic	MEIS3P1	NA	NA	NA	ncRNA_exonic	ENSG00000179277	NA	NA	NA	Score=767;Name=lod=1747	NA	17p12	NA	Name=NRSF	NA	NA	rs4791638	0.2	0.2	0.148	0.171326	0.2356	0.1895	0.1945	0.059	0.2219	0.27	0.24	0.2	0.06	0.2235	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.032098	NA	NA	NA	NA	NA	0.145	NA	6.2075666
1031	2	26177198	26177198	A	G	exonic	KIF3C	NA	synonymous SNV	KIF3C:NM_002254:exon4:c.T1827C:p.Y609Y	exonic	ENSG00000084731	NA	synonymous SNV	ENSG00000084731:ENST00000264712:exon4:c.T1827C:p.Y609Y,ENSG00000084731:ENST00000417737:exon4:c.T1827C:p.Y609Y,ENSG00000084731:ENST00000455394:exon4:c.T1827C:p.Y609Y,ENSG00000084731:ENST00000405914:exon5:c.T1827C:p.Y609Y	Score=522;Name=lod=176	NA	2p23.3	NA	NA	NA	NA	rs17047211	0.14	0.14	0.142	0.140375	0.1481	0.001	0.121	0.2685	0.1166	0.15	0.0017	0.16	0.27	0.1544	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.251821	1.251821	NA	0.156628	0.251475	NA	0.21	NA	6.2075386
1031	15	45983276	45983276	G	T	UTR3	SQRDL	NM_001271213:c.*48G>T,NM_021199:c.*48G>T	NA	NA	UTR3	ENSG00000137767	ENST00000568606:c.*48G>T,ENST00000260324:c.*48G>T	NA	NA	NA	NA	15q21.1	Score=807;Name=V$HNF1_C	NA	Name=8	NA	rs11855175	0.02	0.02	0.022	0.0213658	0.0378	NA	0.0331	0.0015	0.045	0.04	NA	0.04	0.01	0.0356	0.053	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.565247	NA	NA	0.05306	0.009554	NA	0.007	NA	6.2068734
1031	22	37622815	37622815	A	G	exonic	RAC2	NA	synonymous SNV	RAC2:NM_002872:exon6:c.T477C:p.A159A	exonic	ENSG00000128340	NA	synonymous SNV	ENSG00000128340:ENST00000249071:exon6:c.T477C:p.A159A,ENSG00000128340:ENST00000405484:exon6:c.T456C:p.A152A,ENSG00000128340:ENST00000406508:exon6:c.T345C:p.A115A,ENSG00000128340:ENST00000441619:exon7:c.T477C:p.A159A	Score=496;Name=lod=138	NA	22q13.1	NA	NA	NA	NA	rs1064498	0.24	0.24	0.259	0.247404	0.1501	0.3105	0.1023	0.4508	0.1104	0.15	0.28	0.1	0.46	0.1703	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.413217	1.413217	NA	0.140963	0.389923	NA	0.21	NA	6.2053036
1032	7	6036980	6036980	G	C	exonic	PMS2	NA	synonymous SNV	PMS2:NM_000535:exon7:c.C780G:p.S260S	exonic	ENSG00000122512	NA	synonymous SNV	ENSG00000122512:ENST00000441476:exon4:c.C462G:p.S154S,ENSG00000122512:ENST00000265849:exon7:c.C780G:p.S260S,ENSG00000122512:ENST00000382321:exon7:c.C780G:p.S260S,ENSG00000122512:ENST00000406569:exon7:c.C780G:p.S260S	NA	NA	7p22.1	NA	Name=SMC3_(ab9263),Rad21,CTCF,CTCF_(SC-5916),CTCF_(C-20)	Name=139	NA	rs1805319	0.84	0.84	0.864	0.83127	0.836	0.879	0.7478	0.8555	0.8037	0.84	0.91	0.73	0.84	0.8109	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.904149	NA	NA	0.814767	0.841353	NA	0.848	CLINSIG=non-pathogenic|non-pathogenic|non-pathogenic;CLNDBN=Lynch_syndrome|not_specified|Neoplastic_Syndromes\x2c_Hereditary;CLNREVSTAT=exp|single|single;CLNACC=RCV000030372.2|RCV000079112.1|RCV000131484.1;CLNDSDB=GeneReviews:MedGen:SNOMED_CT|.|MedGen;CLNDSDBID=NBK1211:C0009405:315058005|.|C0027672	6.2049996
1032	6	32362639	32362639	G	A	exonic	BTNL2	NA	synonymous SNV	BTNL2:NM_019602:exon6:c.C1242T:p.H414H	exonic	ENSG00000204290	NA	synonymous SNV	ENSG00000204290:ENST00000414363:exon4:c.C612T:p.H204H,ENSG00000204290:ENST00000540315:exon4:c.C612T:p.H204H,ENSG00000204290:ENST00000544175:exon5:c.C411T:p.H137H,ENSG00000204290:ENST00000374993:exon6:c.C1242T:p.H414H,ENSG00000204290:ENST00000374995:exon6:c.C960T:p.H320H,ENSG00000204290:ENST00000454136:exon6:c.C1242T:p.H414H	NA	NA	6p21.32	Score=728;Name=V$NRSF_01	NA	NA	NA	rs41535850	0.16	0.16	0.155	0.163938	0.163	0.1587	0.1599	0.1422	0.2025	0.16	0.18	0.18	0.12	0.155	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.099247	NA	NA	0.144302	0.125057	NA	0.188	NA	6.2043646
1032	9	79325297	79325297	T	G	exonic	PRUNE2	NA	synonymous SNV	PRUNE2:NM_015225:exon8:c.A1893C:p.T631T	exonic	ENSG00000106772	NA	synonymous SNV	ENSG00000106772:ENST00000376718:exon8:c.A1893C:p.T631T,ENSG00000106772:ENST00000428286:exon8:c.A816C:p.T272T	Score=343;Name=lod=33	NA	9q21.2	NA	NA	NA	NA	rs11145018	0.26	0.26	0.264	0.238019	0.1551	0.4643	0.1599	0.2126	0.18	0.15	0.5	0.14	0.22	0.1845	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.475044	NA	NA	0.123116	0.200255	NA	0.167	NA	6.2039506
1032	16	66600479	66600479	G	A	exonic	CMTM1	NA	synonymous SNV	CMTM1:NM_052999:exon1:c.G63A:p.P21P,CMTM1:NM_181268:exon1:c.G63A:p.P21P,CMTM1:NM_181269:exon1:c.G63A:p.P21P,CMTM1:NM_181270:exon1:c.G63A:p.P21P,CMTM1:NM_181271:exon1:c.G63A:p.P21P,CMTM1:NM_181272:exon1:c.G63A:p.P21P,CMTM1:NM_181283:exon1:c.G63A:p.P21P,CMTM1:NM_181296:exon1:c.G63A:p.P21P	exonic	ENSG00000089505	NA	synonymous SNV	ENSG00000089505:ENST00000328020:exon1:c.G63A:p.P21P,ENSG00000089505:ENST00000332695:exon1:c.G63A:p.P21P,ENSG00000089505:ENST00000333001:exon1:c.G63A:p.P21P,ENSG00000089505:ENST00000336328:exon1:c.G63A:p.P21P,ENSG00000089505:ENST00000379500:exon1:c.G63A:p.P21P,ENSG00000089505:ENST00000457188:exon1:c.G63A:p.P21P,ENSG00000089505:ENST00000528324:exon1:c.G63A:p.P21P,ENSG00000089505:ENST00000528484:exon1:c.G63A:p.P21P,ENSG00000089505:ENST00000529386:exon1:c.G63A:p.P21P,ENSG00000089505:ENST00000529506:exon1:c.G63A:p.P21P,ENSG00000089505:ENST00000531885:exon1:c.G63A:p.P21P,ENSG00000089505:ENST00000533078:exon1:c.G63A:p.P21P,ENSG00000089505:ENST00000533666:exon1:c.G63A:p.P21P,ENSG00000089505:ENST00000533915:exon1:c.G63A:p.P21P,ENSG00000089505:ENST00000533953:exon1:c.G63A:p.P21P,ENSG00000089505:ENST00000535705:exon1:c.G63A:p.P21P	NA	NA	16q21	NA	NA	Name=4	NA	rs7193473	0.29	0.29	0.28	0.320687	0.1362	0.3006	0.2723	0.5643	0.2362	0.13	0.29	0.26	0.55	0.2071	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.434138	NA	NA	0.119884	0.517038	NA	0.232	NA	6.2034826
1032	16	84218565	84218565	T	C	exonic	TAF1C	NA	synonymous SNV	TAF1C:NM_001243156:exon2:c.A30G:p.A10A,TAF1C:NM_005679:exon2:c.A30G:p.A10A	exonic	ENSG00000103168	NA	synonymous SNV	ENSG00000103168:ENST00000378541:exon1:c.A30G:p.A10A,ENSG00000103168:ENST00000564345:exon2:c.A30G:p.A10A,ENSG00000103168:ENST00000564454:exon2:c.A30G:p.A10A,ENSG00000103168:ENST00000566732:exon2:c.A30G:p.A10A,ENSG00000103168:ENST00000566903:exon2:c.A30G:p.A10A,ENSG00000103168:ENST00000567759:exon2:c.A30G:p.A10A,ENSG00000103168:ENST00000569609:exon2:c.A30G:p.A10A	NA	NA	16q24.1	NA	NA	Name=14	NA	rs2230126	0.18	0.18	0.175	0.197684	0.1521	0.2639	0.0749	0.2421	0.2035	0.15	0.23	0.1	0.22	0.1662	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.933325	NA	NA	0.145615	0.221136	NA	0.188	NA	6.2027516
1032	19	19655670	19655670	C	T	exonic	CILP2	NA	synonymous SNV	CILP2:NM_153221:exon8:c.C2316T:p.S772S	exonic	ENSG00000160161	NA	synonymous SNV	ENSG00000160161:ENST00000291495:exon8:c.C2316T:p.S772S,ENSG00000160161:ENST00000586018:exon8:c.C2334T:p.S778S	NA	NA	19p13.11	Score=876;Name=V$SPZ1_01	NA	NA	NA	rs11669558	0.13	0.13	0.126	0.117013	0.166	NA	0.1167	0.177	0.1063	0.15	NA	0.14	0.23	0.1461	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.178973	NA	NA	0.152074	0.153675	NA	0.123	NA	6.2024926
1032	2	70520846	70520846	C	T	UTR5	SNRPG	NM_003096:c.-65G>A	NA	NA	UTR5	ENSG00000143977	ENST00000272348:c.-65G>A	NA	NA	NA	NA	2p13.3	NA	Name=SIX5,Oct-2,Max,c-Myc,ELF1_(SC-631),NFKB,HEY1,TBP,GTF2F1_(RAP-74),CEBPB,IRF1,CHD2_(N-1250),TCF12,GTF2B,E2F4,ELK4,POU2F2,GABP,ZBTB33,FOSL2,JunD,Pol2(b),TAF1,Sin3Ak-20,BRCA1_(C-1863),HA-E2F1,ZNF263,KAP1,GATA-2,Pol2-4H8,eGFP-JunD,Pol2,RFX5_(N-494),YY1,Pol2(phosphoS2)	Name=148	NA	rs15656	0.08	0.08	0.056	0.0690895	0.0686	0.1607	0.0778	0.0159	0.0409	0.07	0.16	0.05	0.02	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.435587	1.435587	NA	0.063482	0.031792	NA	0.072	NA	6.2012514
1032	19	41809995	41809995	A	G	exonic	HNRNPUL1	NA	synonymous SNV	HNRNPUL1:NM_007040:exon13:c.A2091G:p.P697P,HNRNPUL1:NM_144732:exon13:c.A1791G:p.P597P	exonic	ENSG00000105323	NA	synonymous SNV	ENSG00000105323:ENST00000378215:exon12:c.A1749G:p.P583P,ENSG00000105323:ENST00000263367:exon13:c.A1824G:p.P608P,ENSG00000105323:ENST00000352456:exon13:c.A1791G:p.P597P,ENSG00000105323:ENST00000392006:exon13:c.A2091G:p.P697P,ENSG00000105323:ENST00000593587:exon13:c.A1791G:p.P597P,ENSG00000105323:ENST00000595018:exon13:c.A1791G:p.P597P,ENSG00000105323:ENST00000602130:exon13:c.A2091G:p.P697P	NA	NA	19q13.2	Score=1000;Name=V$AML1_01	NA	NA	NA	rs1056854	0.15	0.15	0.125	0.1248	0.171	0.2034	0.1311	0.0673	0.0695	0.16	0.22	0.16	0.06	0.1393	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.320222	NA	NA	0.155188	0.088062	NA	0.109	NA	6.2011786
1032	22	34022284	34022284	G	A	exonic	LARGE	NA	synonymous SNV	LARGE:NM_133642:exon4:c.C435T:p.A145A,LARGE:NM_004737:exon5:c.C435T:p.A145A	exonic	ENSG00000133424	NA	synonymous SNV	ENSG00000133424:ENST00000397394:exon4:c.C435T:p.A145A,ENSG00000133424:ENST00000402320:exon4:c.C435T:p.A145A,ENSG00000133424:ENST00000437602:exon4:c.C435T:p.A145A,ENSG00000133424:ENST00000337431:exon5:c.C435T:p.A145A,ENSG00000133424:ENST00000354992:exon5:c.C435T:p.A145A	Score=619;Name=lod=437	NA	22q12.3	NA	NA	NA	NA	rs86487	0.44	0.44	0.4	0.412939	0.505	0.5615	0.4841	0.1082	0.5266	0.51	0.56	0.51	0.13	0.4771	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.591014	1.591014	NA	0.483605	0.16364	NA	0.486	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000081181.1;CLNDSDB=.;CLNDSDBID=.	6.2009616
1032	8	125498547	125498547	C	T	exonic	RNF139	NA	synonymous SNV	RNF139:NM_007218:exon2:c.C657T:p.Y219Y	exonic	ENSG00000170881	NA	synonymous SNV	ENSG00000170881:ENST00000303545:exon2:c.C657T:p.Y219Y	Score=662;Name=lod=652	NA	8q24.13	NA	NA	Name=12	NA	rs3812471	0.55	0.55	0.564	0.570887	0.494	0.4355	0.4755	0.7912	0.5593	0.5	0.42	0.52	0.8	0.5071	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.128153	NA	NA	0.464767	0.702905	NA	0.493	NA	6.2007996
1032	13	108861913	108861913	A	G	exonic	LIG4	NA	synonymous SNV	LIG4:NM_001098268:exon2:c.T1704C:p.D568D,LIG4:NM_002312:exon2:c.T1704C:p.D568D,LIG4:NM_206937:exon3:c.T1704C:p.D568D	exonic	ENSG00000174405	NA	synonymous SNV	ENSG00000174405:ENST00000356922:exon2:c.T1704C:p.D568D,ENSG00000174405:ENST00000405925:exon2:c.T1704C:p.D568D,ENSG00000174405:ENST00000442234:exon2:c.T1704C:p.D568D	NA	NA	13q33.3	NA	NA	NA	NA	rs1805386	0.09	0.09	0.089	0.0686901	0.1481	0.001	0.1326	0.0507	0.0358	0.15	NA	0.15	0.08	0.1344	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.000136	NA	NA	0.183837	0.079891	NA	0.043	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117489.2;CLNDSDB=.;CLNDSDBID=.	6.2003296
1032	17	4802329	4802329	G	A	exonic	CHRNE	NA	synonymous SNV	CHRNE:NM_000080:exon11:c.C1293T:p.A431A	exonic	ENSG00000108556	NA	synonymous SNV	ENSG00000108556:ENST00000293780:exon11:c.C1293T:p.A431A	NA	NA	17p13.2	NA	NA	NA	NA	rs33978919	0.17	0.17	0.184	0.191294	0.1461	0.0655	0.2176	0.3298	0.1616	0.13	0.06	0.21	0.35	0.1804	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.966429	NA	NA	0.140047	0.279519	NA	0.29	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116735.1;CLNDSDB=.;CLNDSDBID=.	6.2001196
1032	3	186509517	186509517	G	A	exonic	RFC4	NA	synonymous SNV	RFC4:NM_002916:exon8:c.C798T:p.A266A,RFC4:NM_181573:exon8:c.C798T:p.A266A	exonic	ENSG00000163918	NA	synonymous SNV	ENSG00000163918:ENST00000417876:exon1:c.C123T:p.A41A,ENSG00000163918:ENST00000433496:exon7:c.C798T:p.A266A,ENSG00000163918:ENST00000296273:exon8:c.C798T:p.A266A,ENSG00000163918:ENST00000392481:exon8:c.C798T:p.A266A	Score=502;Name=lod=146	NA	3q27.3	NA	NA	Name=53	NA	rs187868	0.5	0.5	0.493	0.483826	0.494	0.5	0.4942	0.4402	0.5082	0.5	0.54	0.46	0.5	0.4918	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.407822	1.407822	NA	0.480814	0.463005	ID=COSM1421534;OCCURENCE=1(large_intestine)	0.312	NA	6.2000526
1032	3	42201759	42201759	G	A	UTR5	TRAK1	NM_014965:c.-95G>A	NA	NA	UTR5	ENSG00000182606	ENST00000396175:c.-95G>A,ENST00000341421:c.-95G>A	NA	NA	Score=243;Name=lod=13	NA	3p22.1	NA	Name=FOXA1_(C-20),TAF1,Pol2-4H8,Pol2,HEY1,FOXA2_(SC-6554),FOXA1_(SC-101058),ELF1_(SC-631),AP-2gamma	NA	NA	rs9755034	0.07	0.07	0.056	0.0666933	0.1342	0.0308	0.0749	0.0197	0.092	0.13	0.02	0.1	0.02	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.040762	NA	NA	NA	NA	NA	0.138	NA	6.1991334
1032	17	59544863	59544863	G	A	intronic	TBX4	NA	NA	NA	intronic	ENSG00000121075	NA	NA	NA	Score=500;Name=lod=143	NA	17q23.2	NA	Name=GATA-2	Name=95	NA	rs758596	0.32	0.32	0.318	0.347843	0.2584	0.3859	0.2046	0.4637	0.3456	0.26	0.37	0.2	0.45	0.2802	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.032354	2.032354	NA	0.263023	0.41557	NA	0.362	NA	6.198377
1032	4	100045616	100045616	C	T	exonic	ADH4	NA	nonsynonymous SNV	ADH4:NM_000670:exon9:c.G1120A:p.V374I	exonic	ENSG00000198099	NA	nonsynonymous SNV	ENSG00000198099:ENST00000265512:exon9:c.G1120A:p.V374I,ENSG00000198099:ENST00000423445:exon9:c.G1177A:p.V393I,ENSG00000198099:ENST00000505590:exon10:c.G1177A:p.V393I,ENSG00000198099:ENST00000508393:exon10:c.G1177A:p.V393I	Score=300;Name=lod=22	NA	4q23	NA	NA	NA	NA	rs1126673	0.82	0.82	0.834	0.847244	0.6978	0.999	0.7709	0.8608	0.8804	0.7	1	0.76	0.84	0.7549	1	1	T	0.004	B	0.003	B	0.003	N	0.999	P	-0.505	N	4.11	T	-0.997	T	0.000	T	0.123	-1.995	0.007	0.629	0.133	0.511	3.592	-1.995442	NA	1	0.682643	0.822661	NA	0.739	NA	6.1979904
1032	22	24579158	24579158	A	C	exonic	SUSD2	NA	synonymous SNV	SUSD2:NM_019601:exon2:c.A210C:p.G70G	exonic	ENSG00000099994	NA	synonymous SNV	ENSG00000099994:ENST00000358321:exon2:c.A210C:p.G70G	Score=393;Name=lod=53	NA	22q11.23	NA	NA	NA	NA	rs76831457	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.09008	NA	NA	NA	NA	ID=COSM1180265;OCCURENCE=1(prostate)	NA	NA	6.1966666
1032	22	24035970	24035970	C	T	exonic	RGL4	NA	nonsynonymous SNV	RGL4:NM_153615:exon4:c.C721T:p.H241Y	exonic	ENSG00000159496	NA	nonsynonymous SNV	ENSG00000159496:ENST00000290691:exon4:c.C721T:p.H241Y,ENSG00000159496:ENST00000423392:exon4:c.C721T:p.H241Y,ENSG00000159496:ENST00000401461:exon5:c.C313T:p.H105Y,ENSG00000159496:ENST00000441897:exon6:c.C721T:p.H241Y	NA	NA	22q11.23	NA	NA	NA	NA	rs2070446	0.76	0.76	0.792	0.774561	0.7018	0.6687	0.768	0.9607	0.7117	0.72	0.67	0.72	0.96	0.7289	0.96	1	T	0.001	B	0.004	B	0.502	N	1.000	P	-0.55	N	1.58	T	-1.002	T	0.000	T	0.09	-1.483	0.018	-1.06	-0.608	1.616	8.453	-1.483311	NA	1	0.706163	0.92601	NA	0.833	NA	6.1964704
1032	19	39019153	39019153	A	G	intronic	RYR1	NA	NA	NA	ncRNA_exonic	ENSG00000269445	NA	NA	NA	NA	NA	19q13.2	NA	NA	Name=8	NA	rs6508806	0.17	0.17	0.137	0.201478	0.1372	0.2431	0.2565	0.1082	0.3119	0.14	0.21	0.23	0.12	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.718286	NA	NA	NA	NA	NA	0.203	CLINSIG=untested;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000119422.1;CLNDSDB=.;CLNDSDBID=.	6.1961333
1032	19	855966	855966	C	A	exonic	ELANE	NA	synonymous SNV	ELANE:NM_001972:exon5:c.C606A:p.S202S	exonic	ENSG00000197561	NA	synonymous SNV	ENSG00000197561:ENST00000263621:exon5:c.C606A:p.S202S,ENSG00000197561:ENST00000590230:exon6:c.C606A:p.S202S	Score=471;Name=lod=109	NA	19p13.3	NA	NA	NA	NA	rs17216649	0.07	0.07	0.071	0.0485224	0.169	0.002	0.0648	0.0053	0.0194	0.17	0.0017	0.07	0.01	0.1223	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.761358	NA	NA	0.180042	0.036541	ID=COSM440687;OCCURENCE=1(breast)	0.109	NA	6.1953246
1032	9	27220066	27220066	G	A	exonic	TEK	NA	synonymous SNV	TEK:NM_000459:exon21:c.G3123A:p.G1041G	exonic	ENSG00000120156	NA	synonymous SNV	ENSG00000120156:ENST00000519097:exon19:c.G2679A:p.G893G,ENSG00000120156:ENST00000406359:exon20:c.G2994A:p.G998G,ENSG00000120156:ENST00000380036:exon21:c.G3123A:p.G1041G	Score=483;Name=lod=123	NA	9p21.2	NA	NA	NA	NA	rs2273719	0.19	0.19	0.188	0.224241	0.1332	0.1736	0.1614	0.3888	0.1922	0.15	0.16	0.15	0.32	0.18	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.049194	NA	NA	0.158372	0.353836	NA	0.21	NA	6.1950946
1033	5	132198100	132198100	C	T	exonic	GDF9	NA	synonymous SNV	GDF9:NM_005260:exon2:c.G546A:p.E182E	exonic	ENSG00000164404	NA	synonymous SNV	ENSG00000164404:ENST00000296875:exon2:c.G546A:p.E182E,ENSG00000164404:ENST00000378673:exon3:c.G546A:p.E182E	NA	NA	5q31.1	NA	Name=STAT1,STAT2	NA	NA	rs10491279	0.16	0.16	0.159	0.134784	0.1561	0.1498	0.1138	0.1952	0.0307	0.15	0.15	0.14	0.21	0.1426	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.153172	NA	NA	0.173023	0.209941	NA	0.167	NA	6.1949436
1033	17	15644506	15644506	C	T	exonic	TBC1D26	NA	nonsynonymous SNV	TBC1D26:NM_178571:exon10:c.C617T:p.A206V	exonic	ENSG00000214946	NA	nonsynonymous SNV	ENSG00000214946:ENST00000437605:exon10:c.C617T:p.A206V,ENSG00000214946:ENST00000469477:exon10:c.C617T:p.A206V	Score=295;Name=lod=21	NA	17p12	NA	NA	NA	NA	rs11650318	0.26	0.26	0.228	0.246605	0.3946	0.255	0.2651	0.0817	0.2955	0.39	0.24	0.29	0.07	0.3445	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.577114	2.577114	NA	0.399487	0.131916	NA	0.239	NA	6.1947464
1033	6	32026107	32026107	C	T	exonic	TNXB	NA	nonsynonymous SNV	TNXB:NM_019105:exon22:c.G7553A:p.G2518E	exonic	ENSG00000168477	NA	nonsynonymous SNV	ENSG00000168477:ENST00000375244:exon22:c.G7553A:p.G2518E,ENSG00000168477:ENST00000375247:exon22:c.G7553A:p.G2518E	NA	NA	6p21.33	NA	NA	NA	NA	rs1009382	0.69	0.69	0.684	0.696086	0.7187	0.6577	0.7594	0.6248	0.7638	0.72	0.65	0.77	0.64	0.7192	0.77	1	T	0.0	B	0.001	B	0.110	N	1.000	P	-0.975	N	3.59	T	-0.948	T	0.001	T	0.057	-2.509	0.003	3.3	0.237	.	1.605	-2.508586	NA	1	0.700918	0.652381	NA	0.703	NA	6.1945154
1033	6	32713018	32713018	C	T	exonic	HLA-DQA2	NA	synonymous SNV	HLA-DQA2:NM_020056:exon2:c.C165T:p.D55D	exonic	ENSG00000237541	NA	synonymous SNV	ENSG00000237541:ENST00000374940:exon2:c.C165T:p.D55D	Score=429;Name=lod=74	NA	6p21.32	NA	NA	NA	NA	rs17213281	0.15	0.15	0.136	0.174121	0.1571	0.0734	0.2089	0.27	0.1411	0.14	0.06	0.21	0.24	0.155	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.258039	NA	NA	0.160576	0.221377	NA	0.159	NA	6.1939906
1033	1	110233147	110233147	C	T	exonic	GSTM1	NA	synonymous SNV	GSTM1:NM_000561:exon7:c.C528T:p.D176D	exonic	ENSG00000134184	NA	synonymous SNV	ENSG00000134184:ENST00000309851:exon7:c.C528T:p.D176D,ENSG00000134184:ENST00000369823:exon7:c.C585T:p.D195D	NA	NA	1p13.3	Score=895;Name=V$IK1_01	NA	NA	NA	rs1056806	0.19	0.19	0.216	0.228235	0.1581	0.2034	0.2219	0.2413	0.3129	0.13	0.17	0.2	0.28	0.1996	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.611067	NA	NA	0.115226	0.243375	ID=COSM1332500;OCCURENCE=2(large_intestine)	0.072	NA	6.1937406
1033	11	117303858	117303858	T	C	exonic	DSCAML1	NA	synonymous SNV	DSCAML1:NM_020693:exon29:c.A5202G:p.Q1734Q	exonic	ENSG00000177103	NA	synonymous SNV	ENSG00000177103:ENST00000527706:exon27:c.A4392G:p.Q1464Q,ENSG00000177103:ENST00000321322:exon29:c.A5202G:p.Q1734Q	Score=615;Name=lod=422	NA	11q23.3	NA	NA	NA	NA	rs11216382	0.16	0.16	0.159	0.140974	0.1551	0.0565	0.1758	0.2557	0.0337	0.16	0.05	0.19	0.28	0.1504	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.991772	NA	NA	0.167481	0.244662	NA	0.203	NA	6.1936856
1033	19	42342319	42342319	A	G	exonic	LYPD4	NA	synonymous SNV	LYPD4:NM_173506:exon4:c.T228C:p.V76V	exonic	ENSG00000183103	NA	synonymous SNV	ENSG00000183103:ENST00000343055:exon2:c.T123C:p.V41V,ENSG00000183103:ENST00000330743:exon4:c.T228C:p.V76V,ENSG00000183103:ENST00000601246:exon5:c.T123C:p.V41V	Score=383;Name=lod=48	NA	19q13.2	NA	NA	Name=2	NA	rs2290695	0.6	0.6	0.595	0.605431	0.4722	0.5208	0.5764	0.91	0.4387	0.48	0.56	0.52	0.89	0.5192	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.823394	NA	NA	0.48186	0.833409	NA	0.594	NA	6.1934066
1033	6	32629891	32629891	C	T	exonic	HLA-DQB1	NA	nonsynonymous SNV	HLA-DQB1:NM_001243961:exon3:c.G514A:p.A172T,HLA-DQB1:NM_002123:exon3:c.G514A:p.A172T	exonic	ENSG00000179344	NA	nonsynonymous SNV	ENSG00000179344:ENST00000399082:exon2:c.G244A:p.A82T,ENSG00000179344:ENST00000374943:exon3:c.G514A:p.A172T,ENSG00000179344:ENST00000399079:exon3:c.G514A:p.A172T,ENSG00000179344:ENST00000434651:exon3:c.G514A:p.A172T,ENSG00000179344:ENST00000399084:exon4:c.G514A:p.A172T	NA	NA	6p21.32	NA	NA	NA	NA	rs1063323	0.42	0.42	0.344	0.395168	0.3946	0.4782	0.5447	0.3154	0.3119	0.4	0.49	0.52	0.31	0.3947	0.52	0.26	T	0.008	B	0.008	B	0.084	N	1.000	P	.	.	4.15	T	-0.899	T	0.003	T	0.286	-0.725	0.892	1.78	0.057	0.431	8.606	-0.725235	NA	0.16	0.35064	0.288321	NA	0.116	NA	6.1933934
1033	19	47770032	47770032	C	T	exonic	CCDC9	NA	synonymous SNV	CCDC9:NM_015603:exon8:c.C885T:p.A295A	exonic	ENSG00000105321	NA	synonymous SNV	ENSG00000105321:ENST00000221922:exon8:c.C885T:p.A295A	NA	NA	19q13.32	NA	Name=c-Myc	NA	NA	rs60383222	0.12	0.12	0.131	0.138578	0.1471	0.0754	0.0865	0.1278	0.2464	0.17	0.05	0.09	0.13	0.1742	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.301813	NA	NA	0.152558	0.118355	NA	0.087	NA	6.1928086
1033	17	42949808	42949808	G	A	intronic	EFTUD2	NA	NA	NA	intronic	ENSG00000108883	NA	NA	NA	NA	NA	17q21.31	Score=921;Name=V$CEBP_01	NA	Name=31	NA	rs11654183	0.26	0.26	0.257	0.242612	0.2624	0.249	0.2277	0.23	0.2434	0.27	0.28	0.26	0.22	0.2673	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.197114	NA	NA	0.277791	0.239446	NA	0.174	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116956.2;CLNDSDB=.;CLNDSDBID=.	6.192509
1033	1	10218439	10218439	T	C	exonic	UBE4B	NA	synonymous SNV	UBE4B:NM_006048:exon21:c.T2565C:p.S855S,UBE4B:NM_001105562:exon22:c.T2952C:p.S984S	exonic	ENSG00000130939	NA	synonymous SNV	ENSG00000130939:ENST00000253251:exon21:c.T2565C:p.S855S,ENSG00000130939:ENST00000377157:exon21:c.T2217C:p.S739S,ENSG00000130939:ENST00000343090:exon22:c.T2952C:p.S984S	Score=695;Name=lod=886	NA	1p36.22	NA	NA	NA	NA	rs2273299	0.34	0.34	0.351	0.365815	0.1392	0.2956	0.1873	0.8033	0.2065	0.14	0.29	0.2	0.79	0.203	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.57941	1.57941	NA	0.131977	0.667726	ID=COSM146388;OCCURENCE=1(stomach)	0.362	NA	6.1924896
1033	12	52681416	52681416	T	C	exonic	KRT81	NA	synonymous SNV	KRT81:NM_002281:exon6:c.A990G:p.Q330Q	exonic	ENSG00000205426	NA	synonymous SNV	ENSG00000205426:ENST00000327741:exon6:c.A990G:p.Q330Q	Score=601;Name=lod=369	NA	12q13.13	NA	Name=Pol2	NA	NA	rs7300801	0.36	0.36	0.322	0.420527	0.5169	0.1577	0.3761	0.5688	0.4233	0.44	0.15	0.35	0.48	0.4633	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.235207	1.235207	NA	0.494535	0.551294	NA	0.5	NA	6.1919316
1033	7	154681216	154681216	G	A	exonic	DPP6	NA	synonymous SNV	DPP6:NM_001039350:exon25:c.G2235A:p.R745R,DPP6:NM_001936:exon25:c.G2241A:p.R747R,DPP6:NM_130797:exon25:c.G2427A:p.R809R	exonic	ENSG00000130226	NA	synonymous SNV	ENSG00000130226:ENST00000427557:exon23:c.G2106A:p.R702R,ENSG00000130226:ENST00000332007:exon25:c.G2241A:p.R747R,ENSG00000130226:ENST00000377770:exon25:c.G2427A:p.R809R,ENSG00000130226:ENST00000404039:exon25:c.G2235A:p.R745R	Score=514;Name=lod=163	NA	7q36.2	NA	NA	NA	NA	rs1129301	0.25	0.25	0.232	0.263978	0.1243	0.4663	0.1398	0.351	0.1697	0.12	0.42	0.14	0.36	0.2107	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.09437	NA	NA	0.140034	0.345809	NA	0.196	NA	6.1916326
1033	19	19654189	19654189	G	A	exonic	CILP2	NA	synonymous SNV	CILP2:NM_153221:exon7:c.G1110A:p.S370S	exonic	ENSG00000160161	NA	synonymous SNV	ENSG00000160161:ENST00000291495:exon7:c.G1110A:p.S370S,ENSG00000160161:ENST00000586018:exon7:c.G1128A:p.S376S	NA	NA	19p13.11	Score=756;Name=V$MYOGNF1_01	NA	NA	NA	rs45556231	0.12	0.12	0.13	0.118411	0.166	NA	0.1167	0.1634	0.1319	0.15	NA	0.14	0.21	0.145	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.388965	NA	NA	0.165155	0.162506	ID=COSM1129943;OCCURENCE=1(prostate)	0.123	NA	6.1905116
1033	15	52401951	52401951	G	A	UTR3	BCL2L10	NM_020396:c.*94C>T	NA	NA	UTR3	ENSG00000137875	ENST00000260442:c.*94C>T,ENST00000561198:c.*53C>T	NA	NA	NA	NA	15q21.2	NA	Name=NFKB,BCL3,PAX5-N19,PAX5-C20,TCF12,EBF,Oct-2,BATF,POU2F2,BCL11A	Name=9	NA	rs2227308	0.15	0.15	0.117	0.148762	0.1431	0.1865	0.3228	0.0234	0.1616	0.14	0.19	0.3	0.03	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.879837	NA	NA	NA	NA	NA	0.152	NA	6.1902334
1033	3	125648165	125648165	T	C	ncRNA_exonic	FAM86JP	NA	NA	NA	ncRNA_exonic	ENSG00000171084	NA	NA	NA	NA	NA	3q21.2	NA	Name=CTCF_(SC-5916),CTCF,Rad21,CTCF_(C-20)	Name=52	NA	rs9826071	0.21	0.21	0.194	0.223442	0.171	0.1071	0.147	0.4478	0.1483	0.17	0.1	0.17	0.45	0.1529	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.444515	NA	NA	0.153035	0.341026	NA	0.094	NA	6.1897316
1033	11	117097952	117097952	C	T	exonic	PCSK7	NA	synonymous SNV	PCSK7:NM_004716:exon5:c.G690A:p.T230T	exonic	ENSG00000160613	NA	synonymous SNV	ENSG00000160613:ENST00000525027:exon3:c.G690A:p.T230T,ENSG00000160613:ENST00000320934:exon5:c.G690A:p.T230T	NA	NA	11q23.3	Score=825;Name=V$GR_Q6	NA	NA	NA	rs2306473	0.18	0.18	0.18	0.209465	0.1332	0.0675	0.232	0.3971	0.1646	0.13	0.09	0.2	0.36	0.1915	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.430007	NA	NA	0.152584	0.344389	ID=COSM428471;OCCURENCE=1(breast)	0.159	NA	6.1893826
1033	17	76468843	76468843	C	T	intronic	DNAH17	NA	NA	NA	exonic	ENSG00000187775	NA	unknown	UNKNOWN	NA	NA	17q25.3	NA	Name=EBF1_(C-8),SP1,IRF4_(M-17),TCF12,PAX5-C20,PAX5-N19,EBF	Name=8	NA	rs55655829	0.14	0.14	0.126	0.15016	0.1233	0.1895	0.0965	0.1195	0.2168	0.13	0.18	0.11	0.12	0.1885	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.750868	NA	NA	NA	NA	NA	0.087	NA	6.1882
1033	1	101203698	101203698	C	T	exonic	VCAM1	NA	synonymous SNV	VCAM1:NM_080682:exon8:c.C1803T:p.D601D,VCAM1:NM_001078:exon9:c.C2079T:p.D693D,VCAM1:NM_001199834:exon9:c.C1893T:p.D631D	exonic	ENSG00000162692	NA	synonymous SNV	ENSG00000162692:ENST00000370115:exon7:c.C1482T:p.D494D,ENSG00000162692:ENST00000347652:exon8:c.C1803T:p.D601D,ENSG00000162692:ENST00000294728:exon9:c.C2079T:p.D693D,ENSG00000162692:ENST00000370119:exon9:c.C1893T:p.D631D	NA	NA	1p21.2	Score=808;Name=V$RSRFC4_01	NA	NA	NA	rs3176878	0.12	0.12	0.107	0.129193	0.1531	0.0208	0.2435	0.1672	0.0838	0.15	0.01	0.21	0.14	0.1577	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.66355	NA	NA	0.168488	0.16296	NA	0.094	NA	6.1873786
1033	15	52401933	52401933	A	G	UTR3	BCL2L10	NM_020396:c.*112T>C	NA	NA	UTR3	ENSG00000137875	ENST00000260442:c.*112T>C	NA	NA	NA	NA	15q21.2	NA	Name=PAX5-N19,PAX5-C20,NFKB,BCL3,TCF12,EBF,Oct-2,BATF,POU2F2,BCL11A	Name=9	NA	rs2231297	0.21	0.21	0.198	0.221246	0.1461	0.1895	0.3429	0.2821	0.1626	0.14	0.19	0.32	0.26	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.114167	NA	NA	NA	NA	NA	0.225	NA	6.1872334
1033	1	165398115	165398115	T	C	exonic	RXRG	NA	synonymous SNV	RXRG:NM_006917:exon2:c.A138G:p.T46T	exonic	ENSG00000143171	NA	synonymous SNV	ENSG00000143171:ENST00000359842:exon2:c.A138G:p.T46T	Score=470;Name=lod=108	NA	1q23.3	NA	NA	NA	NA	rs113471	0.24	0.24	0.232	0.25	0.1531	0.246	0.2896	0.416	0.1012	0.13	0.23	0.25	0.42	0.173	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.458093	1.458093	NA	0.153605	0.347481	NA	0.297	NA	6.1869616
1033	17	39258027	39258027	G	A	intergenic	KRTAP4-8,KRTAP4-9	dist=3652;dist=3614	NA	NA	exonic	ENSG00000241241	NA	synonymous SNV	ENSG00000241241:ENST00000440582:exon1:c.C435T:p.H145H	Score=358;Name=lod=38	NA	17q21.2	Score=926;Name=V$AREB6_01	NA	Name=11	NA	rs7503699	0.51	0.51	0.543	0.496006	0.667	0.251	0.5043	0.531	0.5194	0.67	0.24	0.55	0.54	0.6466	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.38051	NA	NA	NA	NA	NA	0.638	NA	6.1864
1033	1	155033308	155033308	G	A	exonic	ADAM15	NA	synonymous SNV	ADAM15:NM_001261464:exon19:c.G2307A:p.K769K,ADAM15:NM_003815:exon19:c.G2277A:p.K759K,ADAM15:NM_207194:exon19:c.G2277A:p.K759K,ADAM15:NM_207195:exon19:c.G2277A:p.K759K,ADAM15:NM_207196:exon19:c.G2277A:p.K759K,ADAM15:NM_207197:exon19:c.G2277A:p.K759K	exonic	ENSG00000143537	NA	synonymous SNV	ENSG00000143537:ENST00000368410:exon12:c.G1395A:p.K465K,ENSG00000143537:ENST00000368413:exon12:c.G1395A:p.K465K,ENSG00000143537:ENST00000271836:exon19:c.G2277A:p.K759K,ENSG00000143537:ENST00000355956:exon19:c.G2277A:p.K759K,ENSG00000143537:ENST00000356955:exon19:c.G2277A:p.K759K,ENSG00000143537:ENST00000359280:exon19:c.G2277A:p.K759K,ENSG00000143537:ENST00000449910:exon19:c.G2277A:p.K759K,ENSG00000143537:ENST00000526491:exon19:c.G2277A:p.K759K,ENSG00000143537:ENST00000529473:exon19:c.G2277A:p.K759K,ENSG00000143537:ENST00000531455:exon19:c.G2307A:p.K769K	Score=452;Name=lod=92	NA	1q22	NA	NA	NA	NA	rs11589479	0.09	0.09	0.082	0.0750799	0.1819	0.0089	0.0951	0.0045	0.1145	0.18	NA	0.14	0.01	0.1291	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.348741	1.348741	NA	0.169302	0.032002	NA	0.101	NA	6.1863646
1033	11	36595600	36595600	A	G	exonic	RAG1	NA	nonsynonymous SNV	RAG1:NM_000448:exon2:c.A746G:p.H249R	exonic	ENSG00000166349	NA	nonsynonymous SNV	ENSG00000166349:ENST00000299440:exon2:c.A746G:p.H249R,ENSG00000166349:ENST00000534663:exon8:c.A746G:p.H249R	NA	NA	11p12	NA	NA	NA	NA	rs3740955	0.59	0.59	0.593	0.613419	0.3648	0.756	0.6052	0.7708	0.5153	0.37	0.78	0.55	0.74	0.447	0.78	0.08	T	0.0	B	0.0	B	0.235	N	1.000	P	0.11	N	1.23	T	-0.923	T	0.000	T	0.068	-1.056	0.188	-1.98	-0.541	0.169	10.230	-1.055818	NA	0.27	0.33597	0.726612	NA	0.529	NA	6.1855634
1033	6	4716037	4716037	T	C	intergenic	ECI2,CDYL	dist=580206;dist=60643	NA	NA	exonic	ENSG00000153046	NA	nonsynonymous SNV	ENSG00000153046:ENST00000328908:exon2:c.T25C:p.S9P	NA	NA	6p25.1	NA	NA	NA	NA	rs3812178	0.26	0.26	0.247	0.235224	0.2247	0.2679	0.3256	0.3116	0.045	0.22	0.24	0.29	0.3	0.213	0.3	0.35	T	0.0	B	0.0	B	.	.	1.000	P	.	.	0.75	T	-1.044	T	0.029	T	0.103	-1.14	0.11	3.3	0.300	0.252	3.831	-1.139865	NA	0.32	0.210116	0.281207	ID=COSM150037;OCCURENCE=1(stomach),1(lung)	0.29	NA	6.1855174
1034	1	177001896	177001896	C	G	exonic	ASTN1	NA	synonymous SNV	ASTN1:NM_004319:exon3:c.G561C:p.P187P,ASTN1:NM_207108:exon3:c.G561C:p.P187P	exonic	ENSG00000152092	NA	synonymous SNV	ENSG00000152092:ENST00000361833:exon3:c.G561C:p.P187P,ENSG00000152092:ENST00000367654:exon3:c.G561C:p.P187P,ENSG00000152092:ENST00000367657:exon3:c.G561C:p.P187P,ENSG00000152092:ENST00000424564:exon3:c.G561C:p.P187P	Score=546;Name=lod=220	NA	1q25.2	NA	NA	NA	NA	rs2076069	0.16	0.16	0.134	0.14996	0.1471	0.2599	0.2118	0.0272	0.1616	0.15	0.24	0.21	0.03	0.1704	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.315699	NA	NA	0.164884	0.051748	NA	0.116	NA	6.1842826
1034	2	47613870	47613870	T	C	UTR3	EPCAM	NM_002354:c.*118T>C	NA	NA	UTR3	ENSG00000119888	ENST00000405271:c.*118T>C,ENST00000456133:c.*118T>C,ENST00000263735:c.*118T>C	NA	NA	NA	NA	2p21	NA	Name=BATF	Name=8	NA	rs1421	0.12	0.12	0.088	0.10004	0.1491	0.1825	0.1455	0.0045	0.0613	0.15	0.17	0.14	0.01	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.63432	1.63432	NA	NA	NA	NA	0.08	NA	6.1842334
1034	6	24418786	24418786	T	C	exonic	MRS2	NA	synonymous SNV	MRS2:NM_020662:exon9:c.T1087C:p.L363L	exonic	ENSG00000124532	NA	synonymous SNV	ENSG00000124532:ENST00000535061:exon7:c.T937C:p.L313L,ENSG00000124532:ENST00000543597:exon8:c.T214C:p.L72L,ENSG00000124532:ENST00000378353:exon9:c.T1087C:p.L363L,ENSG00000124532:ENST00000378386:exon9:c.T1087C:p.L363L,ENSG00000124532:ENST00000443868:exon10:c.T1096C:p.L366L	Score=579;Name=lod=300	NA	6p22.3	NA	NA	NA	NA	rs79527965	0.13	0.13	0.123	0.116214	0.1938	0.1478	0.0965	0.0159	0.1534	0.2	0.16	0.09	0.02	0.1454	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.370375	1.370375	NA	0.143488	0.038584	ID=COSM150058;OCCURENCE=1(stomach)	0.094	NA	6.1839786
1034	2	11798481	11798481	A	T	UTR3	NTSR2	NM_012344:c.*124T>A	NA	NA	UTR3	ENSG00000169006	ENST00000306928:c.*124T>A	NA	NA	NA	NA	2p25.1	NA	Name=E2F6_(H-50),TAL1_(SC-12984),STAT3,USF-1	Name=9	NA	rs6742234	0.21	0.21	0.205	0.20607	0.1501	0.124	0.219	0.4327	0.0327	0.14	0.12	0.2	0.45	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.938742	NA	NA	NA	NA	NA	0.239	NA	6.1832334
1034	19	19390185	19390185	G	A	exonic	SUGP1	NA	synonymous SNV	SUGP1:NM_172231:exon10:c.C1365T:p.Y455Y	exonic	ENSG00000105705	NA	synonymous SNV	ENSG00000105705:ENST00000247001:exon10:c.C1365T:p.Y455Y	Score=577;Name=lod=295	NA	19p13.11	NA	NA	NA	NA	rs11555053	0.15	0.15	0.17	0.149161	0.167	NA	0.1268	0.295	0.1033	0.15	NA	0.14	0.35	0.1584	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.968406	NA	NA	0.158488	0.282016	ID=COSM439014;OCCURENCE=1(breast)	0.246	NA	6.1827786
1034	2	33281558	33281558	G	A	intronic	LTBP1	NA	NA	NA	ncRNA_exonic	ENSG00000223951	NA	NA	NA	Score=673;Name=lod=725	NA	2p22.3	NA	Name=Pol2-4H8,HEY1	NA	NA	rs72791802	0.07	0.07	0.056	0.0593051	0.1511	0.004	0.0576	0.0061	0.0951	0.15	0.0035	0.08	0.01	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.819726	NA	NA	NA	NA	NA	0.029	NA	6.1822333
1034	16	81971403	81971403	T	C	exonic	PLCG2	NA	synonymous SNV	PLCG2:NM_002661:exon28:c.T3093C:p.N1031N	exonic	ENSG00000197943	NA	synonymous SNV	ENSG00000197943:ENST00000359376:exon28:c.T3093C:p.N1031N	Score=426;Name=lod=72	NA	16q23.3	NA	NA	Name=34	NA	rs1071644	0.37	0.37	0.361	0.313898	0.504	0.3442	0.3199	0.0764	0.4039	0.49	0.41	0.4	0.1	0.4487	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.395552	1.395552	NA	0.531739	0.151645	NA	0.42	NA	6.1822276
1034	12	15035081	15035081	T	C	exonic	MGP	NA	nonsynonymous SNV	MGP:NM_000900:exon4:c.A304G:p.T102A,MGP:NM_001190839:exon5:c.A379G:p.T127A	exonic	ENSG00000111341	NA	nonsynonymous SNV	ENSG00000111341:ENST00000539261:exon4:c.A304G:p.T102A,ENSG00000111341:ENST00000228938:exon5:c.A379G:p.T127A	NA	NA	12p12.3	NA	NA	NA	NA	rs4236	0.35	0.35	0.338	0.385383	0.3777	0.129	0.3991	0.5469	0.4294	0.36	0.12	0.43	0.56	0.38	0.56	1	T	0.0	B	0.0	B	0.329	N	1.000	P	0	N	1.58	T	-0.951	T	0.000	T	0.04	-0.8	0.677	0.156	-0.068	-0.553	5.053	-0.799755	NA	1	0.393605	0.522469	ID=COSM147452;OCCURENCE=1(stomach)	0.529	NA	6.1820284
1034	15	101093924	101093924	T	A	ncRNA_exonic	PRKXP1	NA	NA	NA	ncRNA_exonic	ENSG00000259205	NA	NA	NA	Score=624;Name=lod=456	NA	15q26.3	NA	NA	Name=4	NA	rs28538762	0.33	0.33	0.343	0.307708	0.4851	0.244	0.2608	0.1959	0.3753	0.5	0.25	0.3	0.2	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.232636	NA	NA	NA	NA	ID=COSN165068;OCCURENCE=1(breast),1(NS)	0.362	NA	6.1815666
1034	3	9870857	9870857	G	A	exonic	ARPC4-TTLL3,TTLL3	NA	synonymous SNV	TTLL3:NM_001025930:exon10:c.G1761A:p.Q587Q,ARPC4-TTLL3:NM_001198793:exon11:c.G1515A:p.Q505Q	exonic	ENSG00000214021,ENSG00000250151	NA	synonymous SNV	ENSG00000214021:ENST00000383827:exon4:c.G696A:p.Q232Q,ENSG00000214021:ENST00000430793:exon4:c.G696A:p.Q232Q,ENSG00000214021:ENST00000438141:exon4:c.G696A:p.Q232Q,ENSG00000214021:ENST00000455274:exon4:c.G696A:p.Q232Q,ENSG00000214021:ENST00000443148:exon7:c.G1146A:p.Q382Q,ENSG00000214021:ENST00000427853:exon8:c.G696A:p.Q232Q,ENSG00000214021:ENST00000397241:exon10:c.G696A:p.Q232Q,ENSG00000214021:ENST00000426895:exon10:c.G1761A:p.Q587Q,ENSG00000214021:ENST00000547186:exon10:c.G1332A:p.Q444Q,ENSG00000250151:ENST00000397256:exon11:c.G1515A:p.Q505Q	NA	NA	3p25.3	NA	Name=ZNF263	NA	NA	rs2290303	0.33	0.33	0.335	0.272963	0.5746	0.1577	0.3112	0.1286	0.2495	0.58	0.16	0.35	0.14	0.4057	0.58	.	.	.	.	.	.	.	.	0.036	P	.	.	.	.	-0.914	T	0.000	T	.	0.682	7.645	0.73	0.489	0.301	5.643	0.681788	NA	NA	0.504884	0.180209	NA	0.413	NA	6.1814826
1034	7	104717517	104717517	C	T	exonic	MLL5	NA	synonymous SNV	MLL5:NM_018682:exon9:c.C876T:p.Y292Y,MLL5:NM_182931:exon10:c.C876T:p.Y292Y	exonic	ENSG00000005483	NA	synonymous SNV	ENSG00000005483:ENST00000478990:exon6:c.C450T:p.Y150Y,ENSG00000005483:ENST00000257745:exon9:c.C876T:p.Y292Y,ENSG00000005483:ENST00000311117:exon10:c.C876T:p.Y292Y,ENSG00000005483:ENST00000334877:exon10:c.C876T:p.Y292Y,ENSG00000005483:ENST00000334884:exon10:c.C876T:p.Y292Y,ENSG00000005483:ENST00000476671:exon10:c.C876T:p.Y292Y	Score=625;Name=lod=463	NA	7q22.3	NA	NA	NA	NA	rs2240455	0.4	0.4	0.428	0.383187	0.1342	0.6319	0.2435	0.59	0.2025	0.12	0.69	0.25	0.59	0.2282	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.089848	NA	NA	0.122907	0.522923	NA	0.449	NA	6.1813596
1034	11	1018496	1018496	G	T	exonic	MUC6	NA	synonymous SNV	MUC6:NM_005961:exon31:c.C4305A:p.T1435T	exonic	ENSG00000184956	NA	synonymous SNV	ENSG00000184956:ENST00000421673:exon31:c.C4305A:p.T1435T	NA	NA	11p15.5	NA	NA	Name=3	NA	rs67341709	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.486	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.467771	NA	NA	NA	NA	NA	NA	NA	6.1806666
1034	7	1195215	1195215	A	C	exonic	ZFAND2A	NA	synonymous SNV	ZFAND2A:NM_182491:exon4:c.T156G:p.V52V	exonic	ENSG00000178381	NA	synonymous SNV	ENSG00000178381:ENST00000316495:exon4:c.T156G:p.V52V,ENSG00000178381:ENST00000397083:exon4:c.T156G:p.V52V,ENSG00000178381:ENST00000401903:exon4:c.T156G:p.V52V	Score=420;Name=lod=68	NA	7p22.3	NA	NA	NA	NA	rs1133116	0.12	0.12	0.113	0.111222	0.1481	0.0268	0.1816	0.0749	0.1595	0.16	0.03	0.15	0.12	0.1606	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.521432	NA	NA	0.177558	0.085111	NA	0.181	NA	6.1804086
1034	14	39703324	39703324	A	G	exonic	MIA2	NA	synonymous SNV	MIA2:NM_054024:exon1:c.A6G:p.A2A	exonic	ENSG00000150526,ENSG00000258941	NA	synonymous SNV	ENSG00000150526:ENST00000280082:exon1:c.A6G:p.A2A,ENSG00000258941:ENST00000553728:exon1:c.A6G:p.A2A,ENSG00000150526:ENST00000555143:exon1:c.A6G:p.A2A,ENSG00000150526:ENST00000556784:exon1:c.A6G:p.A2A,ENSG00000150526:ENST00000557148:exon3:c.A6G:p.A2A	NA	NA	14q21.1	NA	Name=ZBTB33	Name=3	NA	rs7141840	0.61	0.61	0.602	0.59984	0.4742	0.6548	0.5029	0.8616	0.3875	0.46	0.66	0.56	0.82	0.5268	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.823348	NA	NA	0.485349	0.820245	NA	0.543	NA	6.1803176
1034	11	13514053	13514053	G	T	exonic	PTH	NA	synonymous SNV	PTH:NM_000315:exon3:c.C247A:p.R83R	exonic	ENSG00000152266	NA	synonymous SNV	ENSG00000152266:ENST00000282091:exon3:c.C247A:p.R83R,ENSG00000152266:ENST00000529816:exon3:c.C247A:p.R83R	NA	NA	11p15.2	NA	NA	NA	NA	rs6256	0.13	0.13	0.135	0.151358	0.171	0.121	0.1052	0.0477	0.3354	0.17	0.12	0.12	0.07	0.1611	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.447469	NA	NA	0.154401	0.063182	NA	0.196	CLINSIG=pathogenic;CLNDBN=Primary_hyperparathyroidism;CLNREVSTAT=single;CLNACC=RCV000014767.24;CLNDSDB=MedGen:SNOMED_CT;CLNDSDBID=C0221002:36348003	6.1801656
1034	1	33631069	33631069	C	A	intronic	TRIM62	NA	NA	NA	intronic	ENSG00000116525	NA	NA	NA	Score=441;Name=lod=83	NA	1p35.1	NA	Name=E2F6_(H-50)	Name=5	NA	rs2306257	0.19	0.19	0.186	0.1877	0.2505	0.2014	0.183	0.0537	0.2935	0.26	0.2	0.18	0.07	0.3338	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.419929	2.419929	NA	0.235581	0.094233	NA	0.13	NA	6.180119
1034	3	125649403	125649403	C	A	exonic	ALG1L	NA	synonymous SNV	ALG1L:NM_001015050:exon5:c.G345T:p.L115L,ALG1L:NM_001195223:exon6:c.G405T:p.L135L	exonic	ENSG00000189366	NA	synonymous SNV	ENSG00000189366:ENST00000340333:exon5:c.G345T:p.L115L	Score=363;Name=lod=40	NA	3q21.2	NA	NA	NA	NA	rs7615952	0.23	0.23	0.25	0.234026	0.172	0.1071	0.1527	0.4841	0.1483	0.17	0.1	0.18	0.5	0.1582	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.449034	NA	NA	0.156371	0.393741	NA	0.268	NA	6.1800956
1034	5	176402401	176402401	G	A	exonic	UIMC1	NA	synonymous SNV	UIMC1:NM_001199298:exon3:c.C228T:p.I76I,UIMC1:NM_016290:exon3:c.C228T:p.I76I,UIMC1:NM_001199297:exon4:c.C228T:p.I76I	exonic	ENSG00000087206	NA	synonymous SNV	ENSG00000087206:ENST00000377219:exon3:c.C228T:p.I76I,ENSG00000087206:ENST00000377227:exon3:c.C228T:p.I76I,ENSG00000087206:ENST00000506128:exon3:c.C228T:p.I76I,ENSG00000087206:ENST00000509236:exon3:c.C228T:p.I76I,ENSG00000087206:ENST00000510698:exon3:c.C228T:p.I76I,ENSG00000087206:ENST00000511320:exon3:c.C228T:p.I76I,ENSG00000087206:ENST00000512031:exon3:c.C228T:p.I76I,ENSG00000087206:ENST00000507513:exon4:c.C228T:p.I76I	Score=496;Name=lod=138	NA	5q35.2	Score=823;Name=V$HTF_01	NA	NA	NA	rs1700490	0.56	0.56	0.592	0.577077	0.4881	0.4911	0.4366	0.8419	0.499	0.49	0.48	0.41	0.86	0.5089	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.075086	NA	NA	0.489765	0.763504	NA	0.514	NA	6.1799016
1034	21	47545826	47545826	C	T	exonic	COL6A2	NA	synonymous SNV	COL6A2:NM_001849:exon26:c.C2097T:p.G699G,COL6A2:NM_058174:exon26:c.C2097T:p.G699G,COL6A2:NM_058175:exon26:c.C2097T:p.G699G	exonic	ENSG00000142173	NA	synonymous SNV	ENSG00000142173:ENST00000397763:exon25:c.C2097T:p.G699G,ENSG00000142173:ENST00000409416:exon25:c.C2097T:p.G699G,ENSG00000142173:ENST00000300527:exon26:c.C2097T:p.G699G,ENSG00000142173:ENST00000310645:exon26:c.C2097T:p.G699G,ENSG00000142173:ENST00000357838:exon26:c.C2097T:p.G699G	Score=481;Name=lod=120	NA	21q22.3	NA	NA	NA	NA	rs13046639	0.44	0.44	0.42	0.39397	0.5109	0.4306	0.6383	0.208	0.3139	0.53	0.41	0.62	0.22	0.4755	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.467134	NA	NA	0.500465	0.241035	NA	0.297	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000079870.2;CLNDSDB=.;CLNDSDBID=.	6.1798016
1034	X	1331495	1331495	G	C	exonic	CRLF2	NA	synonymous SNV	CRLF2:NM_022148:exon1:c.C33G:p.A11A	exonic	ENSG00000205755	NA	synonymous SNV	ENSG00000205755:ENST00000381566:exon1:c.C33G:p.A11A,ENSG00000205755:ENST00000381567:exon1:c.C33G:p.A11A,ENSG00000205755:ENST00000400841:exon1:c.C33G:p.A11A	NA	NA	Xp22.33	NA	Name=MEF2A,IRF4_(M-17),PU.1,SP1,CHD2_(N-1250),BATF,EBF1_(C-8),JunD,FOSL2,EBF,c-Jun,Pol2-4H8,PAX5-N19,ZEB1_(SC-25388),TBP	NA	NA	rs140859855	0.17	0.17	0.15739	NA	NA	NA	NA	NA	NA	0.29	0.06	0.18	0.12	0.2141	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.642735	NA	NA	0.273243	0.130036	NA	0.21	NA	6.1793236
1034	17	76455218	76455218	G	A	exonic	DNAH17	NA	synonymous SNV	DNAH17:NM_173628:exon61:c.C9726T:p.C3242C	exonic	ENSG00000187775	NA	synonymous SNV	ENSG00000187775:ENST00000389840:exon61:c.C9684T:p.C3228C,ENSG00000187775:ENST00000585328:exon61:c.C9711T:p.C3237C	Score=522;Name=lod=176	NA	17q25.3	NA	NA	NA	NA	rs2289754	0.19	0.19	0.15	0.220647	0.1382	0.249	0.3458	0.1392	0.2975	0.13	0.24	0.3	0.13	0.1949	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.46375	1.46375	NA	0.154302	0.140263	NA	0.116	NA	6.1792646
1034	21	43327117	43327117	C	T	exonic	C2CD2	NA	synonymous SNV	C2CD2:NM_199050:exon9:c.G837A:p.A279A,C2CD2:NM_015500:exon10:c.G1302A:p.A434A	exonic	ENSG00000157617	NA	synonymous SNV	ENSG00000157617:ENST00000329623:exon9:c.G837A:p.A279A,ENSG00000157617:ENST00000380486:exon10:c.G1302A:p.A434A	NA	NA	21q22.3	Score=904;Name=V$NFKAPPAB50_01	NA	NA	NA	rs2277795	0.28	0.28	0.328	0.300919	0.1471	0.2728	0.1527	0.5545	0.2505	0.15	0.28	0.16	0.59	0.1919	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.42397	NA	NA	0.148605	0.498184	NA	0.319	NA	6.1790616
1034	12	49723963	49723963	A	G	exonic	TROAP	NA	synonymous SNV	TROAP:NM_005480:exon13:c.A1335G:p.E445E	exonic	ENSG00000135451	NA	synonymous SNV	ENSG00000135451:ENST00000547923:exon7:c.A459G:p.E153E,ENSG00000135451:ENST00000257909:exon13:c.A1335G:p.E445E,ENSG00000135451:ENST00000551245:exon13:c.A1335G:p.E445E	Score=309;Name=lod=24	NA	12q13.12	NA	NA	NA	NA	rs4243545	0.18	0.18	0.192	0.194089	0.1531	0.0407	0.1138	0.4123	0.1564	0.16	0.05	0.14	0.38	0.1718	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.589663	NA	NA	0.163797	0.38266	ID=COSM147501;OCCURENCE=1(stomach)	0.225	NA	6.1779696
1034	20	42281834	42281834	A	G	intergenic	IFT52,MYBL2	dist=5972;dist=13875	NA	NA	ncRNA_exonic	ENSG00000215467	NA	NA	NA	Score=645;Name=lod=560	NA	20q13.12	NA	Name=HNF4A_(H-171),Sin3Ak-20,HDAC2_(SC-6296),HNF4G_(SC-6558),p300,RXRA,CEBPB,TCF4	Name=7	NA	rs285194	0.77	0.77	0.722	0.763978	0.8221	0.7937	0.8012	0.6664	0.7791	0.82	0.77	0.81	0.66	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.630064	NA	NA	NA	NA	NA	0.761	NA	6.1779
1034	1	53544578	53544578	T	C	exonic	PODN	NA	synonymous SNV	PODN:NM_001199082:exon4:c.T1114C:p.L372L,PODN:NM_153703:exon8:c.T1540C:p.L514L,PODN:NM_001199081:exon9:c.T1483C:p.L495L,PODN:NM_001199080:exon10:c.T1483C:p.L495L	exonic	ENSG00000174348	NA	synonymous SNV	ENSG00000174348:ENST00000395871:exon4:c.T1114C:p.L372L,ENSG00000174348:ENST00000312553:exon8:c.T1540C:p.L514L,ENSG00000174348:ENST00000371500:exon10:c.T1483C:p.L495L	Score=309;Name=lod=24	NA	1p32.3	NA	NA	NA	NA	rs11206088	0.13	0.13	0.149	0.139577	0.165	0.0367	0.0865	0.211	0.1605	0.16	0.03	0.1	0.23	0.1722	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.000669	NA	NA	0.151688	0.168937	NA	0.116	NA	6.1777786
1034	9	104433347	104433347	G	A	exonic	GRIN3A	NA	synonymous SNV	GRIN3A:NM_133445:exon3:c.C1347T:p.I449I	exonic	ENSG00000198785	NA	synonymous SNV	ENSG00000198785:ENST00000361820:exon3:c.C1347T:p.I449I	Score=667;Name=lod=685	NA	9q31.1	NA	NA	NA	NA	rs13284303	0.14	0.14	0.11	0.122804	0.167	0.1716	0.1931	0.0068	0.1339	0.16	0.16	0.22	0.01	0.1538	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.472594	NA	NA	0.16907	0.034725	NA	0.152	NA	6.1767966
1034	16	31580272	31580272	C	T	ncRNA_exonic	YBX3P1	NA	NA	NA	ncRNA_exonic	ENSG00000261614	NA	NA	NA	NA	NA	16p11.2	NA	Name=CTCF,Rad21	Name=6	NA	rs4889673	0.3	0.3	0.303	0.299321	0.4901	0.1538	0.3343	0.2027	0.3589	0.47	0.14	0.35	0.2	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.336995	NA	NA	NA	NA	NA	0.261	NA	6.1765666
1034	21	33869440	33869440	A	G	intronic	EVA1C	NA	NA	NA	ncRNA_exonic	ENSG00000229007	NA	NA	NA	Score=708;Name=lod=1006	NA	21q22.11	NA	Name=GATA3_(SC-268)	NA	NA	rs2833854	0.09	0.09	0.093	0.112021	0.1571	0.0169	0.0764	0.1256	0.1708	0.15	0.02	0.08	0.09	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.294645	NA	NA	NA	NA	NA	0.239	NA	6.1762333
1034	15	40330518	40330518	T	G	exonic	SRP14	NA	synonymous SNV	SRP14:NM_003134:exon3:c.A175C:p.R59R	exonic	ENSG00000140319	NA	synonymous SNV	ENSG00000140319:ENST00000267884:exon3:c.A175C:p.R59R,ENSG00000140319:ENST00000559081:exon3:c.A175C:p.R59R	Score=512;Name=lod=161	NA	15q15.1	NA	NA	NA	NA	rs1059395	0.1	0.1	0.1	0.0976438	0.175	0.0248	0.1023	0.0953	0.093	0.17	0.02	0.11	0.11	0.1377	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.964589	1.964589	NA	0.177964	0.113217	NA	0.203	NA	6.1760026
1034	10	53458998	53458998	A	G	exonic	CSTF2T	NA	synonymous SNV	CSTF2T:NM_015235:exon1:c.T312C:p.L104L	exonic	ENSG00000177613	NA	synonymous SNV	ENSG00000177613:ENST00000331173:exon1:c.T312C:p.L104L	Score=559;Name=lod=250	NA	10q21.1	NA	NA	NA	NA	rs2292828	0.29	0.29	0.297	0.315695	0.1571	0.2123	0.1455	0.6831	0.2096	0.15	0.24	0.15	0.66	0.1938	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.481003	NA	NA	0.14	0.565819	ID=COSM146939;OCCURENCE=1(stomach)	0.362	NA	6.1757666
1034	9	104449294	104449294	G	A	exonic	GRIN3A	NA	synonymous SNV	GRIN3A:NM_133445:exon2:c.C888T:p.N296N	exonic	ENSG00000198785	NA	synonymous SNV	ENSG00000198785:ENST00000361820:exon2:c.C888T:p.N296N	Score=420;Name=lod=68	NA	9q31.1	NA	NA	NA	NA	rs33945236	0.14	0.14	0.105	0.122604	0.167	0.1716	0.1902	0.0068	0.135	0.16	0.16	0.21	0.01	0.1546	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.379033	NA	NA	0.169419	0.035179	ID=COSM1459004;OCCURENCE=1(large_intestine)	0.152	NA	6.1756476
1034	5	134914233	134914233	C	T	intronic	CXCL14	NA	NA	NA	ncRNA_intronic	ENSG00000250167	NA	NA	NA	NA	NA	5q31.1	Score=823;Name=V$HNF4_01	Name=ZNF274	NA	NA	rs11950696	0.1	0.1	0.101	0.0954473	0.0527	NA	0.0677	0.2784	0.0102	0.05	NA	0.07	0.33	0.055	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.164131	NA	NA	0.05	0.229687	NA	0.159	NA	6.1756333
1035	5	176378574	176378574	G	T	exonic	UIMC1	NA	synonymous SNV	UIMC1:NM_001199298:exon9:c.C1344A:p.T448T,UIMC1:NM_016290:exon9:c.C1344A:p.T448T,UIMC1:NM_001199297:exon10:c.C1344A:p.T448T	exonic	ENSG00000087206	NA	synonymous SNV	ENSG00000087206:ENST00000510698:exon7:c.C501A:p.T167T,ENSG00000087206:ENST00000377219:exon9:c.C1344A:p.T448T,ENSG00000087206:ENST00000377227:exon9:c.C1344A:p.T448T,ENSG00000087206:ENST00000506128:exon9:c.C846A:p.T282T,ENSG00000087206:ENST00000511320:exon9:c.C1344A:p.T448T	Score=410;Name=lod=62	Name=Menopause (age at onset),Menarche and menopause (age at onset)	5q35.2	NA	NA	NA	NA	rs365132	0.57	0.57	0.585	0.588458	0.4881	0.4911	0.4409	0.8828	0.499	0.49	0.48	0.41	0.89	0.5123	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.443537	NA	NA	0.491277	0.796094	NA	0.536	NA	6.1749896
1035	10	101090428	101090428	T	G	exonic	CNNM1	NA	synonymous SNV	CNNM1:NM_020348:exon1:c.T1284G:p.V428V	exonic	ENSG00000119946	NA	synonymous SNV	ENSG00000119946:ENST00000356713:exon1:c.T1284G:p.V428V,ENSG00000119946:ENST00000370534:exon1:c.T189G:p.V63V,ENSG00000119946:ENST00000370528:exon3:c.T1071G:p.V357V,ENSG00000119946:ENST00000446890:exon3:c.T1071G:p.V357V	Score=712;Name=lod=1047	NA	10q24.2	Score=738;Name=V$HOX13_01	Name=GATA-2,ZNF263	NA	NA	rs2862600	0.85	0.85	0.852	0.869808	0.8201	0.872	0.7435	0.9539	0.8947	0.82	0.86	0.76	0.95	0.8388	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.352252	NA	NA	0.832791	0.937585	NA	0.848	NA	6.1749756
1035	22	50728062	50728062	T	C	exonic	PLXNB2	NA	nonsynonymous SNV	PLXNB2:NM_012401:exon3:c.A952G:p.K318E	exonic	ENSG00000196576	NA	nonsynonymous SNV	ENSG00000196576:ENST00000359337:exon3:c.A952G:p.K318E,ENSG00000196576:ENST00000432455:exon3:c.A952G:p.K318E,ENSG00000196576:ENST00000449103:exon3:c.A952G:p.K318E	NA	NA	22q13.33	NA	NA	NA	NA	rs28379706	0.48	0.48	0.487	0.454073	0.3996	0.5734	0.2666	0.6982	0.1902	0.4	0.56	0.27	0.66	0.3817	0.66	1	T	0.0	B	0.002	B	0.985	N	1.000	P	-0.805	N	3.69	T	-0.981	T	0.000	T	0.013	-2.195	0.005	-1.27	-0.271	-0.279	6.759	-2.194844	NA	1	0.377404	0.610969	NA	0.399	NA	6.1746294
1035	18	9735590	9735590	C	G	intronic	RAB31	NA	NA	NA	ncRNA_exonic	ENSG00000266891	NA	NA	NA	Score=443;Name=lod=84	NA	18p11.22	NA	NA	Name=7	NA	rs12955768	0.12	0.12	0.115	0.132388	0.159	0.0625	0.085	0.1475	0.1902	0.16	0.07	0.08	0.14	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.822486	NA	NA	NA	NA	NA	0.167	NA	6.1743333
1035	3	10138069	10138069	T	G	exonic	FANCD2	NA	synonymous SNV	FANCD2:NM_001018115:exon42:c.T4098G:p.L1366L,FANCD2:NM_033084:exon42:c.T4098G:p.L1366L	exonic	ENSG00000144554	NA	synonymous SNV	ENSG00000144554:ENST00000287647:exon42:c.T4098G:p.L1366L,ENSG00000144554:ENST00000383807:exon42:c.T4098G:p.L1366L,ENSG00000144554:ENST00000419585:exon42:c.T4098G:p.L1366L	Score=588;Name=lod=326	NA	3p25.3	NA	NA	NA	NA	rs2272125	0.23	0.23	0.243	0.242212	0.1412	0.0675	0.196	0.5174	0.1871	0.15	0.1	0.2	0.52	0.1868	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.9622	NA	NA	0.164651	0.471403	NA	0.37	NA	6.1740156
1035	14	21960969	21960969	G	A	exonic	TOX4	NA	synonymous SNV	TOX4:NM_014828:exon7:c.G1194A:p.R398R	exonic	ENSG00000092203	NA	synonymous SNV	ENSG00000092203:ENST00000448790:exon6:c.G1125A:p.R375R,ENSG00000092203:ENST00000262709:exon7:c.G1194A:p.R398R,ENSG00000092203:ENST00000405508:exon8:c.G1194A:p.R398R	Score=678;Name=lod=759	NA	14q11.2	Score=887;Name=V$AP2_Q6	NA	NA	NA	rs7617	0.5	0.5	0.499	0.495208	0.502	0.6488	0.3746	0.4274	0.5072	0.48	0.66	0.4	0.4	0.4887	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.797577	NA	NA	0.502558	0.467544	NA	0.529	NA	6.1734086
1035	20	30193110	30193110	T	C	UTR5	ID1	NM_002165:c.-81T>C,NM_181353:c.-81T>C	NA	NA	UTR5	ENSG00000125968	ENST00000376112:c.-81T>C,ENST00000376105:c.-81T>C	NA	NA	NA	NA	20q11.21	NA	Name=USF1_(SC-8983),Pol2(phosphoS2),NELFe,Pol2,SP1,Mxi1_(bHLH),NF-YA,TAF1,GTF2F1_(RAP-74),RXRA,CHD2_(N-1250),p300,NF-YB,HNF4G_(SC-6558),FOXA1_(SC-101058),Max,HDAC2_(SC-6296),Pol2-4H8,c-Fos,Sin3Ak-20,FOSL2,Pol2(b),IRF1,TBP,USF-1,TCF12,GTF2B,p300_(N-15),BCL3,HEY1	Name=148	NA	rs6060263	0.22	0.22	0.231	0.22484	0.16	NA	0.1686	0.6142	0.0368	0.17	NA	0.17	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.738958	NA	NA	NA	NA	NA	0.225	NA	6.1733334
1035	22	46652303	46652303	A	T	UTR3	PKDREJ	NM_006071:c.*155T>A	NA	NA	UTR3	ENSG00000130943	ENST00000253255:c.*155T>A	NA	NA	NA	NA	22q13.31	NA	Name=eGFP-JunB,eGFP-FOS	Name=34	NA	rs6007732	0.21	0.21	0.243	0.240216	0.16	0.001	0.1297	0.6611	0.0787	0.15	NA	0.15	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.657853	NA	NA	NA	NA	NA	0.29	NA	6.1733334
1035	22	46652372	46652372	G	A	UTR3	PKDREJ	NM_006071:c.*86C>T	NA	NA	UTR3	ENSG00000130943	ENST00000253255:c.*86C>T	NA	NA	NA	NA	22q13.31	NA	Name=eGFP-JunB,eGFP-FOS,FOSL1_(SC-183)	Name=34	NA	rs6008361	0.21	0.21	0.252	0.240415	0.16	0.002	0.1297	0.6611	0.0787	0.15	NA	0.15	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.567986	NA	NA	NA	NA	NA	0.29	NA	6.1733334
1035	2	112754880	112754880	G	A	intronic	MERTK	NA	NA	NA	intronic	ENSG00000153208	NA	NA	NA	NA	NA	2q13	NA	NA	NA	NA	rs3811633	0.18	0.18	0.18	0.190096	0.2873	0.1696	0.1888	0.1029	0.2301	0.25	0.12	0.22	0.11	0.2384	0.3	0.07	T	.	.	.	.	.	.	1.000	P	.	.	.	.	-1.024	T	0.000	T	.	-1.431	0.021	-6.46	-1.829	0.130	6.208	-1.430899	NA	0.57	0.301047	0.148888	NA	0.217	NA	6.173253
1035	17	67178316	67178316	A	G	exonic	ABCA10	NA	nonsynonymous SNV	ABCA10:NM_080282:exon23:c.T2747C:p.M916T	exonic	ENSG00000154263	NA	nonsynonymous SNV	ENSG00000154263:ENST00000523419:exon20:c.T2747C:p.M916T,ENSG00000154263:ENST00000269081:exon23:c.T2747C:p.M916T	NA	NA	17q24.3	NA	NA	NA	NA	rs4968849	0.67	0.67	0.66	0.711262	0.7326	0.4742	0.7882	0.8533	0.6871	0.73	0.43	0.75	0.82	0.7118	0.84	0.96	T	0.001	B	0.0	B	0.502	N	1.000	P	-1.405	N	-1.59	D	-0.971	T	0.000	T	0.05	-2.296	0.004	0.662	-0.189	0.007	7.444	-2.29605	NA	1	0.71593	0.83704	NA	0.457	NA	6.1730034
1035	12	109490601	109490601	C	T	ncRNA_intronic	USP30-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000256262	NA	NA	NA	NA	NA	12q24.11	NA	Name=GATA-1	Name=72	NA	rs2304267	0.18	0.18	0.182	0.179513	0.164	0.1359	0.1254	0.2133	0.2331	0.17	0.15	0.14	0.27	0.1949	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.944122	NA	NA	0.135854	0.155034	NA	0.181	NA	6.1719126
1035	17	4722785	4722785	G	A	exonic	PLD2	NA	synonymous SNV	PLD2:NM_001243108:exon23:c.G2370A:p.L790L,PLD2:NM_002663:exon23:c.G2370A:p.L790L	exonic	ENSG00000129219	NA	synonymous SNV	ENSG00000129219:ENST00000576983:exon7:c.G567A:p.L189L,ENSG00000129219:ENST00000263088:exon23:c.G2370A:p.L790L,ENSG00000129219:ENST00000572940:exon23:c.G2370A:p.L790L	Score=556;Name=lod=243	NA	17p13.2	NA	NA	NA	NA	rs1052751	0.12	0.12	0.114	0.120807	0.1829	0.0427	0.1715	0.1293	0.09	0.17	0.03	0.16	0.14	0.1426	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.103456	NA	NA	0.169651	0.115751	NA	0.268	NA	6.1715156
1035	9	21187311	21187311	C	T	exonic	IFNA4	NA	nonsynonymous SNV	IFNA4:NM_021068:exon1:c.G220A:p.A74T	exonic	ENSG00000236637	NA	nonsynonymous SNV	ENSG00000236637:ENST00000421715:exon1:c.G220A:p.A74T	NA	NA	9p21.3	NA	NA	NA	NA	rs1062571	0.65	0.65	0.65	0.679912	0.5517	0.8611	0.6326	0.6142	0.7474	0.53	0.85	0.65	0.6	0.6106	0.85	0.13	T	0.001	B	0.041	B	0.032	N	1.000	P	1.485	L	3.76	T	-1.105	T	0.000	T	0.14	1.102	9.495	1.06	0.132	0.193	6.490	1.101676	NA	0.15	NA	NA	NA	0.638	NA	6.1710334
1035	1	243579112	243579112	G	A	exonic	SDCCAG8	NA	synonymous SNV	SDCCAG8:NM_006642:exon14:c.G1725A:p.E575E	exonic	ENSG00000054282	NA	synonymous SNV	ENSG00000054282:ENST00000343783:exon11:c.G1290A:p.E430E,ENSG00000054282:ENST00000355875:exon13:c.G1596A:p.E532E,ENSG00000054282:ENST00000366541:exon14:c.G1725A:p.E575E	Score=712;Name=lod=1046	NA	1q43	NA	NA	Name=2	NA	rs10927011	0.5	0.5	0.459	0.439497	0.498	0.7847	0.5403	0.0938	0.4192	0.5	0.78	0.56	0.13	0.4889	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.401454	NA	NA	0.508953	0.164321	NA	0.435	NA	6.1708136
1035	9	37434371	37434371	G	A	intronic	GRHPR	NA	NA	NA	ncRNA_exonic	ENSG00000236156	NA	NA	NA	Score=646;Name=lod=561	NA	9p13.2	NA	Name=ZNF263	NA	NA	rs17885933	0.08	0.08	0.078	0.0569089	0.163	0.003	0.085	0.0189	0.0348	0.16	0.0035	0.1	0.03	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.044428	NA	NA	NA	NA	NA	0.21	NA	6.1703333
1035	18	9888069	9888069	A	G	exonic	TXNDC2	NA	synonymous SNV	TXNDC2:NM_001098529:exon2:c.A1593G:p.E531E,TXNDC2:NM_032243:exon2:c.A1392G:p.E464E	exonic	ENSG00000168454	NA	synonymous SNV	ENSG00000168454:ENST00000306084:exon2:c.A1593G:p.E531E,ENSG00000168454:ENST00000357775:exon2:c.A1392G:p.E464E	Score=441;Name=lod=83	NA	18p11.22	Score=874;Name=V$TATA_01	NA	NA	NA	rs2240905	0.58	0.58	0.573	0.554712	0.4791	0.8175	0.5778	0.472	0.4571	0.49	0.81	0.54	0.49	0.5268	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.992124	NA	NA	0.490698	0.488879	ID=COSM1389984,COSM1389983;OCCURENCE=1(large_intestine)	0.464	NA	6.1700686
1035	8	144654693	144654693	G	C	exonic	MROH6	NA	synonymous SNV	MROH6:NM_001100878:exon1:c.C192G:p.P64P	exonic	ENSG00000204839	NA	synonymous SNV	ENSG00000204839:ENST00000398882:exon1:c.C192G:p.P64P,ENSG00000204839:ENST00000529971:exon1:c.C192G:p.P64P	NA	NA	8q24.3	NA	Name=Pol2	Name=5	NA	rs4873804	0.37	0.37	0.315	0.31889	0.5239	0.3562	0.415	0.1067	0.2883	0.53	0.32	0.49	0.12	0.449	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.153226	NA	NA	0.524234	0.164145	ID=COSM454148,COSM454149;OCCURENCE=1(breast)	0.297	NA	6.1695326
1035	20	36662255	36662255	C	T	UTR5	RPRD1B	NM_021215:c.-95C>T	NA	NA	UTR5	ENSG00000101413	ENST00000373433:c.-95C>T,ENST00000462548:c.-95C>T,ENST00000495457:c.-95C>T	NA	NA	NA	NA	20q11.23	NA	Name=CHD2_(N-1250),HMGN3,E2F6_(H-50),TAF1,YY1_(C-20),TR4,Pol2,c-Myc,NFKB,USF-1,Sin3Ak-20,HA-E2F1,YY1	Name=15	NA	rs881556	0.21	0.21	0.185	0.254193	0.164	0.2163	0.1297	0.3744	0.3119	0.17	0.17	0.15	0.36	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.802228	NA	NA	NA	NA	NA	0.145	NA	6.1693334
1035	17	21215483	21215483	C	T	exonic	MAP2K3	NA	synonymous SNV	MAP2K3:NM_002756:exon10:c.C717T:p.Y239Y,MAP2K3:NM_145109:exon10:c.C804T:p.Y268Y	exonic	ENSG00000034152	NA	synonymous SNV	ENSG00000034152:ENST00000527123:exon1:c.C30T:p.Y10Y,ENSG00000034152:ENST00000342679:exon10:c.C804T:p.Y268Y,ENSG00000034152:ENST00000361818:exon10:c.C717T:p.Y239Y,ENSG00000034152:ENST00000316920:exon11:c.C717T:p.Y239Y	NA	NA	17p11.2	NA	NA	Name=4	NA	rs55935757	0.5	0.5	0.54	0.00798722	0.004	0.0357	NA	NA	NA	0.5	0.5	0.5	0.5	0.4935	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.125627	NA	NA	NA	NA	NA	0.391	NA	6.1691666
1035	14	107183367	107183367	C	T	intergenic	LINC00221,NONE	dist=231838;dist=NONE	NA	NA	downstream	ENSG00000254056	NA	NA	NA	Score=371;Name=lod=43	NA	14q32.33	NA	Name=CTCF_(SC-5916),USF-1,PU.1,CTCFL_(SC-98982),Znf143_(16618-1-AP),CTCF,ELF1_(SC-631)	Name=24	NA	rs3213599	NA	NA	0.559	0.548522	0.331	0.4554	0.4107	0.7708	0.6656	NA	NA	NA	NA	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.258189	NA	NA	NA	NA	NA	0.486	NA	6.169
1035	20	20033380	20033380	A	G	exonic	CRNKL1	NA	synonymous SNV	CRNKL1:NM_016652:exon2:c.T90C:p.S30S	exonic	ENSG00000101343	NA	synonymous SNV	ENSG00000101343:ENST00000377340:exon2:c.T90C:p.S30S	NA	NA	20p11.23	NA	Name=CEBPB,GABP,Znf143_(16618-1-AP),YY1_(C-20),E2F6,SIX5,Sin3Ak-20,HA-E2F1,KAP1,c-Fos	Name=148	NA	rs3817995	0.54	0.54	0.518	0.51897	0.4871	0.7024	0.549	0.4425	0.4448	0.49	0.7	0.52	0.44	0.5405	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.868842	NA	NA	0.470127	0.42461	NA	0.529	NA	6.1689396
1035	17	21318663	21318663	G	A	exonic	KCNJ12,KCNJ18	NA	synonymous SNV	KCNJ18:NM_001194958:exon3:c.G9A:p.A3A,KCNJ12:NM_021012:exon3:c.G9A:p.A3A	exonic	ENSG00000184185	NA	synonymous SNV	ENSG00000184185:ENST00000331718:exon3:c.G9A:p.A3A,ENSG00000184185:ENST00000583088:exon3:c.G9A:p.A3A	NA	NA	17p11.2	Score=791;Name=V$SEF1_C	NA	NA	NA	rs72846666	0.5	0.5	0.41	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.4979	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.224598	NA	NA	NA	NA	NA	0.065	NA	6.1687666
1035	11	72289291	72289291	T	C	exonic	PDE2A	NA	synonymous SNV	PDE2A:NM_001143839:exon29:c.A2580G:p.A860A,PDE2A:NM_001243784:exon30:c.A2538G:p.A846A,PDE2A:NM_002599:exon30:c.A2601G:p.A867A,PDE2A:NM_001146209:exon31:c.A2574G:p.A858A	exonic	ENSG00000186642	NA	synonymous SNV	ENSG00000186642:ENST00000376450:exon20:c.A1833G:p.A611A,ENSG00000186642:ENST00000418754:exon26:c.A2256G:p.A752A,ENSG00000186642:ENST00000544570:exon29:c.A2580G:p.A860A,ENSG00000186642:ENST00000334456:exon30:c.A2601G:p.A867A,ENSG00000186642:ENST00000444035:exon30:c.A2574G:p.A858A,ENSG00000186642:ENST00000540345:exon31:c.A2574G:p.A858A	Score=603;Name=lod=378	NA	11q13.4	Score=877;Name=V$OCT1_06	NA	NA	NA	rs1135029	0.32	0.32	0.311	0.298323	0.5298	0.245	0.3213	0.0885	0.3824	0.52	0.22	0.38	0.09	0.4322	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.391743	1.391743	NA	0.536222	0.175682	NA	0.326	NA	6.1684446
1035	18	56247567	56247567	A	G	exonic	ALPK2	NA	synonymous SNV	ALPK2:NM_052947:exon4:c.T441C:p.Y147Y	exonic	ENSG00000198796	NA	synonymous SNV	ENSG00000198796:ENST00000361673:exon4:c.T441C:p.Y147Y	NA	NA	18q21.32	NA	Name=SRF,USF-1	Name=47	NA	rs9956630	0.48	0.48	0.458	0.482827	0.5	0.6022	0.4755	0.3306	0.5532	0.5	0.63	0.49	0.29	0.5003	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.776055	NA	NA	0.497996	0.356206	NA	0.377	NA	6.1683706
1035	11	124789755	124789755	T	C	exonic	HEPN1	NA	nonsynonymous SNV	HEPN1:NM_001037558:exon1:c.T109C:p.W37R	exonic	ENSG00000221932	NA	nonsynonymous SNV	ENSG00000221932:ENST00000408930:exon1:c.T109C:p.W37R	NA	NA	11q24.2	NA	NA	NA	NA	rs3802904	0.79	0.79	0.8	0.798922	0.7276	0.9236	0.6455	0.8775	0.7464	0.72	0.92	0.63	0.86	0.7371	0.92	0	D	0.0	B	0.0	B	.	.	1.000	P	.	.	0.43	T	-1.026	T	0.000	T	0.076	-0.164	3.197	0.858	-0.364	-0.380	9.300	-0.164479	NA	NA	0.700265	0.869499	NA	0.826	NA	6.1683684
1035	2	232573292	232573292	T	C	UTR5	PTMA	NM_001099285:c.-125T>C,NM_002823:c.-125T>C	NA	NA	UTR5	ENSG00000187514	ENST00000409115:c.-125T>C,ENST00000341369:c.-125T>C,ENST00000409683:c.-125T>C	NA	NA	Score=325;Name=lod=28	NA	2q37.1	NA	Name=TAF7_(SQ-8),HA-E2F1,YY1_(C-20),Sin3Ak-20,Pol2-4H8,Pol2,Egr-1,Pol2(phosphoS2),YY1,POU2F2,TAF1,Pol2(b),TBP,GTF2F1_(RAP-74),GTF2B,Oct-2,HEY1,NFKB	NA	NA	rs12415	0.13	0.13	0.114	0.122005	0.165	0.1706	0.1311	0.0446	0.1258	0.18	0.16	0.12	0.04	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.774065	1.774065	NA	NA	NA	NA	0.058	NA	6.1683334
1035	2	232573301	232573301	C	T	UTR5	PTMA	NM_001099285:c.-116C>T,NM_002823:c.-116C>T	NA	NA	UTR5	ENSG00000187514	ENST00000409115:c.-116C>T,ENST00000341369:c.-116C>T,ENST00000409683:c.-116C>T	NA	NA	Score=325;Name=lod=28	NA	2q37.1	NA	Name=Pol2-4H8,YY1_(C-20),HA-E2F1,Sin3Ak-20,TAF7_(SQ-8),Pol2(phosphoS2),YY1,Egr-1,Pol2,POU2F2,TAF1,Pol2(b),GTF2F1_(RAP-74),TBP,GTF2B,Oct-2,HEY1,NFKB	NA	NA	rs8868	0.13	0.13	0.091	0.122005	0.165	0.1706	0.1311	0.0446	0.1258	0.18	0.16	0.12	0.04	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.620731	1.620731	NA	NA	NA	NA	0.043	NA	6.1683334
1035	11	61511133	61511133	G	A	exonic	DAGLA	NA	synonymous SNV	DAGLA:NM_006133:exon20:c.G2301A:p.A767A	exonic	ENSG00000134780	NA	synonymous SNV	ENSG00000134780:ENST00000257215:exon20:c.G2301A:p.A767A	NA	NA	11q12.2	Score=771;Name=V$NRSF_01	NA	NA	NA	rs3741251	0.15	0.15	0.097	0.180112	0.163	0.1478	0.2176	0.0772	0.3436	0.18	0.13	0.23	0.06	0.1955	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.291818	NA	NA	0.139936	0.075393	NA	0.094	NA	6.1682306
1035	6	136599404	136599404	T	C	exonic	BCLAF1	NA	synonymous SNV	BCLAF1:NM_001077440:exon4:c.A609G:p.S203S,BCLAF1:NM_001077441:exon4:c.A615G:p.S205S,BCLAF1:NM_014739:exon4:c.A615G:p.S205S	exonic	ENSG00000029363	NA	synonymous SNV	ENSG00000029363:ENST00000392348:exon2:c.A609G:p.S203S,ENSG00000029363:ENST00000353331:exon4:c.A609G:p.S203S,ENSG00000029363:ENST00000527536:exon4:c.A615G:p.S205S,ENSG00000029363:ENST00000527613:exon4:c.A615G:p.S205S,ENSG00000029363:ENST00000527759:exon4:c.A609G:p.S203S,ENSG00000029363:ENST00000529826:exon4:c.A615G:p.S205S,ENSG00000029363:ENST00000530429:exon4:c.A609G:p.S203S,ENSG00000029363:ENST00000530767:exon4:c.A615G:p.S205S,ENSG00000029363:ENST00000531224:exon4:c.A615G:p.S205S,ENSG00000029363:ENST00000532384:exon4:c.A615G:p.S205S,ENSG00000029363:ENST00000534269:exon4:c.A609G:p.S203S	Score=810;Name=lod=2601	NA	6q23.3	NA	NA	NA	NA	rs6919254	0.53	0.53	0.561	NA	NA	NA	NA	NA	NA	0.53	0.52	0.56	0.53	0.4987	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.787702	NA	NA	NA	NA	NA	0.471	NA	6.1679666
1035	10	47133375	47133375	C	T	ncRNA_exonic	HNRNPA1P33	NA	NA	NA	ncRNA_exonic	ENSG00000213412	NA	NA	NA	Score=669;Name=lod=699	NA	10q11.22	NA	NA	Name=4	NA	rs4979736	NA	NA	NA	0.511781	0.499	0.505	0.5014	0.5424	0.498	NA	NA	NA	NA	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.581686	NA	NA	NA	NA	NA	0.507	NA	6.1676666
1035	6	31323296	31323296	A	G	exonic	HLA-B	NA	synonymous SNV	HLA-B:NM_005514:exon4:c.T693C:p.G231G	exonic	ENSG00000234745	NA	synonymous SNV	ENSG00000234745:ENST00000434333:exon3:c.T726C:p.G242G,ENSG00000234745:ENST00000412585:exon4:c.T693C:p.G231G	Score=409;Name=lod=61	NA	6p21.33	NA	Name=Pol2,Pol2-4H8	Name=4	NA	rs1050747	0.82	0.82	0.842	0.877196	0.836	0.8284	0.889	0.9107	0.9162	0.81	0.78	0.86	0.87	0.8489	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.14284	NA	NA	0.814289	0.879029	NA	0.855	NA	6.1674776
1035	6	136590712	136590712	C	T	exonic	BCLAF1	NA	synonymous SNV	BCLAF1:NM_001077440:exon9:c.G2076A:p.R692R,BCLAF1:NM_001077441:exon9:c.G1563A:p.R521R,BCLAF1:NM_014739:exon9:c.G2082A:p.R694R	exonic	ENSG00000029363	NA	synonymous SNV	ENSG00000029363:ENST00000392348:exon7:c.G2076A:p.R692R,ENSG00000029363:ENST00000353331:exon9:c.G2076A:p.R692R,ENSG00000029363:ENST00000527536:exon9:c.G2082A:p.R694R,ENSG00000029363:ENST00000527613:exon9:c.G2082A:p.R694R,ENSG00000029363:ENST00000527759:exon9:c.G2076A:p.R692R,ENSG00000029363:ENST00000529826:exon9:c.G2079A:p.R693R,ENSG00000029363:ENST00000530429:exon9:c.G2076A:p.R692R,ENSG00000029363:ENST00000530767:exon9:c.G1563A:p.R521R,ENSG00000029363:ENST00000531224:exon9:c.G2082A:p.R694R,ENSG00000029363:ENST00000532384:exon9:c.G2082A:p.R694R	Score=825;Name=lod=3015	NA	6q23.3	NA	NA	NA	NA	rs62431288	NA	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4992	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.111288	NA	NA	NA	NA	NA	NA	NA	6.1674666
1035	7	66463938	66463938	G	A	exonic	TYW1	NA	synonymous SNV	TYW1:NM_018264:exon3:c.G270A:p.A90A	exonic	ENSG00000198874	NA	synonymous SNV	ENSG00000198874:ENST00000359626:exon3:c.G270A:p.A90A,ENSG00000198874:ENST00000361660:exon3:c.G270A:p.A90A,ENSG00000198874:ENST00000442959:exon3:c.G270A:p.A90A	Score=381;Name=lod=47	NA	7q11.21	NA	NA	NA	NA	rs11547292	0.2	0.2	0.161	0.174321	0.1769	0.2401	0.353	0.0575	0.135	0.18	0.27	0.34	0.06	0.1707	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.749074	NA	NA	0.151628	0.078983	NA	0.123	NA	6.1674386
1035	1	151820845	151820845	C	T	intronic	THEM5	NA	NA	NA	ncRNA_intronic	ENSG00000234614	NA	NA	NA	NA	NA	1q21.3	NA	Name=p300,GATA-2	Name=35	NA	rs60166269	0.17	0.17	0.18	0.192093	0.166	0.3185	0.1239	0.0166	0.3742	0.16	0.34	0.14	0.02	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.31957	NA	NA	NA	NA	NA	0.188	NA	6.1673333
1035	16	28602991	28602991	A	G	exonic	CCDC101	NA	synonymous SNV	CCDC101:NM_138414:exon10:c.A846G:p.R282R	exonic	ENSG00000176476	NA	synonymous SNV	ENSG00000176476:ENST00000317058:exon10:c.A846G:p.R282R	Score=637;Name=lod=517	NA	16p11.2	NA	NA	NA	NA	rs11401	0.16	0.16	0.137	0.174121	0.1571	0.2212	0.2017	0.1619	0.1401	0.13	0.17	0.22	0.16	0.1682	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.317281	1.317281	NA	0.17407	0.169777	NA	0.13	NA	6.1672966
1035	1	153410822	153410822	C	A	exonic	S100A7L2	NA	nonsynonymous SNV	S100A7L2:NM_001045479:exon2:c.G17T:p.G6V	exonic	ENSG00000197364	NA	nonsynonymous SNV	ENSG00000197364:ENST00000368725:exon2:c.G17T:p.G6V	NA	NA	1q21.3	NA	NA	NA	NA	rs10888561	0.63	0.63	0.586	0.614217	0.7376	0.6042	0.7061	0.5	0.5869	0.75	0.54	0.73	0.49	0.6923	0.75	0.02	D	.	.	.	.	.	.	0.999	P	.	.	2.69	T	-0.968	T	0.013	T	0.029	1.064	9.346	-1.48	-0.390	-0.069	2.972	1.06422	NA	0.05	0.736163	0.533137	NA	0.594	NA	6.1672704
1035	6	57467084	57467084	A	G	exonic	PRIM2	NA	unknown	UNKNOWN	exonic	ENSG00000146143	NA	nonsynonymous SNV	ENSG00000146143:ENST00000607273:exon11:c.A1025G:p.D342G	Score=531;Name=lod=191	NA	6p11.2	NA	NA	NA	NA	rs9885913	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4994	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.676994	2.676994	NA	NA	NA	ID=COSM150112;OCCURENCE=1(stomach)	0.449	NA	6.1672667
1035	1	152732436	152732436	G	C	exonic	KPRP	NA	synonymous SNV	KPRP:NM_001025231:exon2:c.G372C:p.A124A	exonic	ENSG00000203786	NA	synonymous SNV	ENSG00000203786:ENST00000606109:exon1:c.G372C:p.A124A,ENSG00000203786:ENST00000368773:exon2:c.G372C:p.A124A	NA	NA	1q21.3	NA	Name=STAT3	Name=8	NA	rs4845480	0.51	0.51	0.501	0.490415	0.5159	0.4187	0.4914	0.5787	0.4182	0.5	0.43	0.54	0.6	0.4813	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.280503	NA	NA	0.502558	0.553563	NA	0.464	NA	6.1669086
1035	12	62979216	62979216	G	A	exonic	MON2	NA	synonymous SNV	MON2:NM_015026:exon33:c.G4842A:p.R1614R	exonic	ENSG00000061987	NA	synonymous SNV	ENSG00000061987:ENST00000393629:exon32:c.G4824A:p.R1608R,ENSG00000061987:ENST00000552738:exon32:c.G4755A:p.R1585R,ENSG00000061987:ENST00000393632:exon33:c.G4842A:p.R1614R,ENSG00000061987:ENST00000546600:exon33:c.G4842A:p.R1614R,ENSG00000061987:ENST00000280379:exon34:c.G4845A:p.R1615R,ENSG00000061987:ENST00000393630:exon34:c.G4845A:p.R1615R	Score=713;Name=lod=1055	NA	12q14.1	NA	NA	NA	NA	rs11174557	0.09	0.09	0.092	0.0778754	0.1859	0.0169	0.1095	0.0129	0.0951	0.18	0.01	0.13	0.02	0.132	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.041648	NA	NA	0.18186	0.037903	NA	0.159	NA	6.1669066
1035	17	21208413	21208413	C	T	exonic	MAP2K3	NA	synonymous SNV	MAP2K3:NM_002756:exon9:c.C660T:p.S220S,MAP2K3:NM_145109:exon9:c.C747T:p.S249S	exonic	ENSG00000034152	NA	synonymous SNV	ENSG00000034152:ENST00000342679:exon9:c.C747T:p.S249S,ENSG00000034152:ENST00000361818:exon9:c.C660T:p.S220S,ENSG00000034152:ENST00000316920:exon10:c.C660T:p.S220S	NA	NA	17p11.2	Score=779;Name=V$PAX5_02	NA	NA	NA	rs1657695	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.4998	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.532227	NA	NA	NA	NA	NA	0.486	NA	6.1668666
1035	6	57246884	57246884	A	G	exonic	PRIM2	NA	unknown	UNKNOWN	exonic	ENSG00000146143	NA	nonsynonymous SNV	ENSG00000146143:ENST00000607273:exon7:c.A611G:p.D204G	Score=643;Name=lod=548	NA	6p11.2	NA	NA	NA	NA	rs6913546	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4999	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.55151	2.55151	0.44	NA	NA	NA	0.493	NA	6.1667667
1035	6	136597262	136597262	T	C	exonic	BCLAF1	NA	synonymous SNV	BCLAF1:NM_001077440:exon5:c.A1395G:p.V465V,BCLAF1:NM_014739:exon5:c.A1401G:p.V467V	exonic	ENSG00000029363	NA	synonymous SNV	ENSG00000029363:ENST00000392348:exon3:c.A1395G:p.V465V,ENSG00000029363:ENST00000353331:exon5:c.A1395G:p.V465V,ENSG00000029363:ENST00000527536:exon5:c.A1401G:p.V467V,ENSG00000029363:ENST00000527613:exon5:c.A1401G:p.V467V,ENSG00000029363:ENST00000527759:exon5:c.A1395G:p.V465V,ENSG00000029363:ENST00000529826:exon5:c.A1401G:p.V467V,ENSG00000029363:ENST00000530429:exon5:c.A1395G:p.V465V,ENSG00000029363:ENST00000531224:exon5:c.A1401G:p.V467V,ENSG00000029363:ENST00000532384:exon5:c.A1401G:p.V467V	Score=841;Name=lod=3476	NA	6q23.3	NA	NA	NA	NA	rs1967444	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4999	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.136237	NA	NA	NA	NA	NA	0.486	NA	6.1667666
1035	11	48346999	48346999	T	G	exonic	OR4C3	NA	synonymous SNV	OR4C3:NM_001004702:exon1:c.T507G:p.L169L	exonic	ENSG00000176547	NA	synonymous SNV	ENSG00000176547:ENST00000319856:exon1:c.T507G:p.L169L	Score=313;Name=lod=25	NA	11p11.2	NA	NA	NA	NA	rs72473367	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.4999	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.655245	NA	NA	NA	NA	NA	0.486	NA	6.1667666
1035	17	21215537	21215537	C	A	exonic	MAP2K3	NA	synonymous SNV	MAP2K3:NM_002756:exon10:c.C771A:p.S257S,MAP2K3:NM_145109:exon10:c.C858A:p.S286S	exonic	ENSG00000034152	NA	synonymous SNV	ENSG00000034152:ENST00000527123:exon1:c.C84A:p.S28S,ENSG00000034152:ENST00000342679:exon10:c.C858A:p.S286S,ENSG00000034152:ENST00000361818:exon10:c.C771A:p.S257S,ENSG00000034152:ENST00000316920:exon11:c.C771A:p.S257S	NA	NA	17p11.2	NA	NA	Name=4	NA	rs55736474	0.5	0.5	0.42	0.00219649	NA	NA	NA	0.0083	NA	0.5	0.5	0.5	0.5	0.4999	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.177425	NA	NA	NA	NA	NA	0.493	NA	6.1667666
1035	17	21215552	21215552	C	T	exonic	MAP2K3	NA	synonymous SNV	MAP2K3:NM_002756:exon10:c.C786T:p.A262A,MAP2K3:NM_145109:exon10:c.C873T:p.A291A	exonic	ENSG00000034152	NA	synonymous SNV	ENSG00000034152:ENST00000527123:exon1:c.C99T:p.A33A,ENSG00000034152:ENST00000342679:exon10:c.C873T:p.A291A,ENSG00000034152:ENST00000361818:exon10:c.C786T:p.A262A,ENSG00000034152:ENST00000316920:exon11:c.C786T:p.A262A	NA	NA	17p11.2	NA	NA	Name=4	NA	rs56369732	0.5	0.5	0.44	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.4999	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.069417	NA	NA	NA	NA	NA	0.493	NA	6.1667666
1035	17	21319473	21319473	G	A	exonic	KCNJ12,KCNJ18	NA	synonymous SNV	KCNJ18:NM_001194958:exon3:c.G819A:p.E273E,KCNJ12:NM_021012:exon3:c.G819A:p.E273E	exonic	ENSG00000184185	NA	synonymous SNV	ENSG00000184185:ENST00000331718:exon3:c.G819A:p.E273E,ENSG00000184185:ENST00000583088:exon3:c.G819A:p.E273E	Score=503;Name=lod=147	NA	17p11.2	NA	NA	NA	NA	rs1657744	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4999	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.289237	NA	NA	NA	NA	NA	0.478	NA	6.1667666
1035	1	45101905	45101905	G	A	intronic	RNF220	NA	NA	NA	UTR3	ENSG00000126106,ENSG00000187147	ENST00000372244:c.*154C>T,ENST00000372243:c.*177C>T,ENST00000372242:c.*177C>T;ENST00000488865:c.*289G>A	NA	NA	Score=401;Name=lod=57	NA	1p34.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.163262	NA	NA	NA	NA	NA	NA	NA	6.1666667
1035	1	144930596	144930596	C	A	exonic	PDE4DIP	NA	synonymous SNV	PDE4DIP:NM_001002811:exon1:c.G1113T:p.P371P	exonic	ENSG00000178104	NA	synonymous SNV	ENSG00000178104:ENST00000313431:exon1:c.G1113T:p.P371P,ENSG00000178104:ENST00000529945:exon1:c.G1113T:p.P371P	NA	NA	1q21.1	NA	Name=USF-1,Pol2,USF1_(SC-8983),KAP1	NA	NA	rs2762867	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.217776	NA	NA	NA	NA	NA	0.5	NA	6.1666666
1035	3	195426108	195426108	A	G	upstream	MIR570	NA	NA	NA	ncRNA_intronic	ENSG00000242086	NA	NA	NA	NA	NA	3q29	NA	Name=eGFP-JunD	Name=31	NA	rs73218505	NA	NA	0.039	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.654264	NA	NA	NA	NA	NA	NA	NA	6.1666666
1035	11	48346822	48346822	A	C	exonic	OR4C3	NA	synonymous SNV	OR4C3:NM_001004702:exon1:c.A330C:p.S110S	exonic	ENSG00000176547	NA	synonymous SNV	ENSG00000176547:ENST00000319856:exon1:c.A330C:p.S110S	NA	NA	11p11.2	Score=884;Name=V$NFE2_01	NA	NA	NA	rs73463997	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.632934	NA	NA	NA	NA	NA	0.391	NA	6.1666666
1035	11	56467926	56467926	A	G	exonic	OR9G1,OR9G9	NA	synonymous SNV	OR9G1:NM_001005213:exon1:c.A63G:p.G21G,OR9G9:NM_001013358:exon1:c.A63G:p.G21G	exonic	ENSG00000174914	NA	synonymous SNV	ENSG00000174914:ENST00000312153:exon1:c.A63G:p.G21G	NA	NA	11q12.1	NA	NA	Name=14	NA	rs1704284	0.5	0.5	NA	0.00179712	NA	NA	NA	NA	0.0092	0.5	0.5	0.5	0.5	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.054854	NA	NA	NA	NA	NA	0.5	NA	6.1666666
1035	3	4856180	4856180	T	C	exonic	ITPR1	NA	synonymous SNV	ITPR1:NM_002222:exon54:c.T7446C:p.T2482T,ITPR1:NM_001099952:exon55:c.T7491C:p.T2497T,ITPR1:NM_001168272:exon57:c.T7590C:p.T2530T	exonic	ENSG00000150995	NA	synonymous SNV	ENSG00000150995:ENST00000544951:exon16:c.T1524C:p.T508T,ENSG00000150995:ENST00000456211:exon54:c.T7446C:p.T2482T,ENSG00000150995:ENST00000357086:exon55:c.T7491C:p.T2497T,ENSG00000150995:ENST00000423119:exon55:c.T7491C:p.T2497T,ENSG00000150995:ENST00000443694:exon55:c.T7590C:p.T2530T,ENSG00000150995:ENST00000302640:exon57:c.T7590C:p.T2530T,ENSG00000150995:ENST00000354582:exon57:c.T7590C:p.T2530T	NA	NA	3p26.1	NA	Name=GTF2B,TBP,NF-E2,ELF1_(SC-631),c-Myc,MafK_(ab50322),eGFP-FOS,Pol2,HDAC2_(SC-6296),eGFP-JunD,c-Fos,c-Jun,p300_(F-4),eGFP-JunB,E2F6_(H-50)	Name=52	NA	rs711631	0.84	0.84	0.832	0.790935	0.836	0.9603	0.8213	0.6778	0.7014	0.86	0.94	0.84	0.71	0.8244	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.413006	1.413006	NA	0.839858	0.726725	NA	0.725	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117304.2;CLNDSDB=.;CLNDSDBID=.	6.1664086
1035	16	70303580	70303580	G	A	exonic	AARS	NA	synonymous SNV	AARS:NM_001605:exon7:c.C903T:p.H301H	exonic	ENSG00000090861	NA	synonymous SNV	ENSG00000090861:ENST00000261772:exon7:c.C903T:p.H301H	NA	NA	16q22.1	Score=888;Name=V$ZIC2_01	Name=Pol2	NA	NA	rs2070203	0.46	0.46	0.453	0.425319	0.5338	0.4256	0.4078	0.438	0.3088	0.53	0.4	0.42	0.46	0.4659	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.796242	NA	NA	0.500814	0.47111	NA	0.391	NA	6.1661526
1035	12	49521672	49521672	G	A	UTR3	TUBA1B	NM_006082:c.*69C>T	NA	NA	ncRNA_exonic	ENSG00000258017	NA	NA	NA	NA	NA	12q13.12	NA	Name=BCLAF1_(M33-P5B11),SP1,Pol2-4H8,CTCF_(SC-5916)	Name=2	NA	rs2753	0.53	0.53	0.549	0.555112	0.334	0.6835	0.3646	0.6997	0.59	0.34	0.72	0.39	0.68	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.110671	NA	NA	NA	NA	NA	0.536	NA	6.166
1035	1	94473845	94473845	T	C	exonic	ABCA4	NA	synonymous SNV	ABCA4:NM_000350:exon42:c.A5844G:p.P1948P	exonic	ENSG00000198691	NA	synonymous SNV	ENSG00000198691:ENST00000535881:exon5:c.A201G:p.P67P,ENSG00000198691:ENST00000536513:exon7:c.A654G:p.P218P,ENSG00000198691:ENST00000370225:exon42:c.A5844G:p.P1948P	Score=389;Name=lod=51	NA	1p22.1	NA	NA	NA	NA	rs2275029	0.19	0.19	0.158	0.167133	0.1441	0.12	0.1585	0.264	0.1145	0.16	0.16	0.19	0.25	0.1748	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.467435	1.467435	NA	0.18186	0.234453	ID=COSM146561;OCCURENCE=1(stomach)	0.174	NA	6.1659066
1035	3	119128398	119128398	G	A	exonic	ARHGAP31	NA	synonymous SNV	ARHGAP31:NM_020754:exon11:c.G1701A:p.P567P	exonic	ENSG00000031081	NA	synonymous SNV	ENSG00000031081:ENST00000264245:exon11:c.G1701A:p.P567P	NA	NA	3q13.33	Score=760;Name=V$NRSF_01	NA	NA	NA	rs2305249	0.19	0.19	0.172	0.1877	0.1551	0.369	0.0922	0.09	0.2342	0.15	0.35	0.11	0.1	0.1706	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.265435	NA	NA	0.175375	0.120115	ID=COSM149451;OCCURENCE=1(stomach)	0.094	NA	6.1655916
1036	3	127454661	127454661	G	T	intronic	MGLL	NA	NA	NA	exonic	ENSG00000074416	NA	nonsynonymous SNV	ENSG00000074416:ENST00000398101:exon1:c.C41A:p.A14E	NA	NA	3q21.3	NA	NA	NA	NA	rs180944812	0.0009	0.0009	NA	0.000798722	0.001	NA	0.0029	0.0008	NA	NA	NA	0.01	NA	0.0005	0.01	0.57	T	0.002	B	0.003	B	.	.	1.000	N	.	.	.	.	-1.005	T	0.028	T	0.063	0.226	5.221	-0.913	-0.662	-0.041	4.091	0.226244	NA	0	0.000502	0.000571	NA	NA	NA	6.1646647
1036	2	44102491	44102491	C	T	exonic	ABCG8	NA	synonymous SNV	ABCG8:NM_022437:exon11:c.C1695T:p.A565A	exonic	ENSG00000143921	NA	synonymous SNV	ENSG00000143921:ENST00000272286:exon11:c.C1695T:p.A565A	Score=423;Name=lod=70	NA	2p21	NA	NA	NA	NA	rs4148221	0.13	0.13	0.133	0.127596	0.1759	0.0188	0.1556	0.1694	0.1135	0.17	0.02	0.19	0.14	0.1489	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.960693	NA	NA	0.177209	0.165002	NA	0.159	NA	6.1646576
1036	10	46999465	46999465	A	G	exonic	GPRIN2	NA	synonymous SNV	GPRIN2:NM_014696:exon3:c.A585G:p.S195S	exonic	ENSG00000204175	NA	synonymous SNV	ENSG00000204175:ENST00000374314:exon1:c.A585G:p.S195S,ENSG00000204175:ENST00000374317:exon3:c.A585G:p.S195S	NA	NA	10q11.22	Score=776;Name=V$ARNT_02	NA	NA	NA	rs3127682	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5021	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.452209	NA	NA	NA	NA	NA	0.5	NA	6.1645666
1036	19	19372150	19372150	C	T	intronic	HAPLN4	NA	NA	NA	ncRNA_intronic	ENSG00000267629	NA	NA	NA	NA	NA	19p13.11	NA	Name=ZBTB7A_(SC-34508),ELF1_(SC-631),PU.1	Name=7	NA	rs7257875	0.22	0.22	0.225	0.244808	0.169	0.1151	0.1427	0.4516	0.2495	0.15	0.12	0.17	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.099445	NA	NA	NA	NA	NA	0.101	NA	6.1643333
1036	19	19372185	19372185	G	C	intronic	HAPLN4	NA	NA	NA	ncRNA_intronic	ENSG00000267629	NA	NA	NA	NA	NA	19p13.11	NA	Name=Max,ELF1_(SC-631),PU.1,ZBTB7A_(SC-34508),Egr-1	Name=7	NA	rs10422893	0.22	0.22	0.249	0.244808	0.169	0.1151	0.1427	0.4516	0.2495	0.15	0.12	0.17	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.494132	NA	NA	NA	NA	NA	0.094	NA	6.1643333
1036	9	125316179	125316179	T	G	exonic	OR1N2	NA	nonsynonymous SNV	OR1N2:NM_001004457:exon1:c.T731G:p.V244G	exonic	ENSG00000171501	NA	nonsynonymous SNV	ENSG00000171501:ENST00000373688:exon1:c.T731G:p.V244G	NA	NA	9q33.2	NA	NA	NA	NA	rs1341044	0.82	0.82	0.822	0.837061	0.7117	0.997	0.7752	0.8593	0.8149	0.69	1	0.76	0.85	0.7548	1	0.42	T	0.0	B	0.0	B	0.094	N	1.000	P	-1.28	N	8.79	T	-0.930	T	0.000	T	0.023	0.779	8.111	3.65	0.551	-0.440	5.998	0.778783	NA	0.13	0.702558	0.842941	NA	0.739	NA	6.1642754
1036	11	78437182	78437182	G	A	exonic	TENM4	NA	synonymous SNV	TENM4:NM_001098816:exon23:c.C3492T:p.D1164D	exonic	ENSG00000149256	NA	synonymous SNV	ENSG00000149256:ENST00000278550:exon23:c.C3492T:p.D1164D	Score=551;Name=lod=232	NA	11q14.1	NA	NA	NA	NA	rs689369	0.18	0.18	0.167	0.180312	0.161	0.1438	0.2277	0.2398	0.1237	0.14	0.13	0.24	0.27	0.175	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.320457	NA	NA	0.166465	0.208978	NA	0.225	NA	6.1642016
1036	5	147480112	147480112	T	C	exonic	SPINK5	NA	synonymous SNV	SPINK5:NM_001127698:exon13:c.T1188C:p.H396H,SPINK5:NM_001127699:exon13:c.T1188C:p.H396H,SPINK5:NM_006846:exon13:c.T1188C:p.H396H	exonic	ENSG00000133710	NA	synonymous SNV	ENSG00000133710:ENST00000256084:exon13:c.T1188C:p.H396H,ENSG00000133710:ENST00000359874:exon13:c.T1188C:p.H396H,ENSG00000133710:ENST00000398454:exon13:c.T1188C:p.H396H,ENSG00000133710:ENST00000508733:exon13:c.T1131C:p.H377H	Score=419;Name=lod=67	NA	5q32	Score=772;Name=V$HEN1_01	NA	NA	NA	rs2303065	0.43	0.43	0.377	0.432907	0.4861	0.4851	0.6167	0.1989	0.5102	0.46	0.46	0.59	0.23	0.5072	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.326679	NA	NA	0.510781	0.250126	ID=COSM149970;OCCURENCE=1(stomach)	0.362	NA	6.1625856
1036	8	144940300	144940300	G	A	exonic	EPPK1	NA	synonymous SNV	EPPK1:NM_031308:exon1:c.C7122T:p.R2374R	exonic	ENSG00000227184	NA	synonymous SNV	ENSG00000227184:ENST00000525985:exon2:c.C7122T:p.R2374R	Score=711;Name=lod=1036	NA	8q24.3	NA	NA	NA	NA	rs4977191	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5044	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.52321	1.52321	NA	NA	NA	NA	0.507	NA	6.1622666
1036	15	81625385	81625385	C	T	exonic	TMC3	NA	nonsynonymous SNV	TMC3:NM_001080532:exon22:c.G2678A:p.C893Y	exonic	ENSG00000188869	NA	nonsynonymous SNV	ENSG00000188869:ENST00000359440:exon22:c.G2678A:p.C893Y,ENSG00000188869:ENST00000558726:exon22:c.G2681A:p.C894Y	NA	NA	15q25.1	NA	NA	NA	NA	rs11636318	0.55	0.55	0.514	0.471046	0.7584	0.4782	0.5951	0.2277	0.409	0.76	0.47	0.65	0.24	0.6456	0.77	0.03	D	0.0	B	0.0	B	0.722	U	1.000	P	0	N	-0.0	T	-0.943	T	0.000	T	0.075	1.191	9.839	-1.28	-0.264	0.726	10.804	1.190567	NA	0.1	0.767425	0.310642	NA	0.493	NA	6.1619084
1036	2	98853173	98853173	G	A	exonic	VWA3B	NA	nonsynonymous SNV	VWA3B:NM_144992:exon19:c.G2653A:p.V885M	exonic	ENSG00000168658	NA	nonsynonymous SNV	ENSG00000168658:ENST00000477737:exon19:c.G2653A:p.V885M	NA	NA	2q11.2	NA	NA	NA	NA	rs11889349	0.6	0.6	0.633	0.664137	0.5447	0.7976	0.4914	0.621	0.8303	0.52	0.77	0.5	0.62	0.5822	0.77	0.21	T	0.827	P	0.169	B	0.522	N	1.000	P	1.175	L	3.2	T	-1.002	T	0.000	T	0.154	-0.796	0.687	0.946	-0.049	0.250	4.495	-0.795959	NA	0.2	0.54489	0.611692	NA	0.551	NA	6.1615434
1036	12	57872306	57872306	G	A	intronic	ARHGAP9	NA	NA	NA	UTR5	ENSG00000123329	ENST00000552066:c.-861C>T	NA	NA	NA	NA	12q13.3	NA	Name=GR	Name=61	NA	rs116549043	0.0037	0.0037	0.004	0.00539137	NA	NA	0.0043	0.0174	0.001	NA	NA	0.01	0.01	0.0031	0.018	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.315086	NA	NA	0.002326	0.018157	NA	NA	NA	6.1612407
1036	1	26646730	26646730	A	G	exonic	CD52	NA	nonsynonymous SNV	CD52:NM_001803:exon2:c.A123G:p.I41M	exonic	ENSG00000169442	NA	nonsynonymous SNV	ENSG00000169442:ENST00000374213:exon2:c.A123G:p.I41M	NA	NA	1p36.11	NA	NA	NA	NA	rs17645	0.62	0.62	0.63	0.580671	0.7356	0.4415	0.5807	0.6301	0.498	0.72	0.46	0.62	0.64	0.6711	0.77	0.54	T	0.0	B	0.001	B	0.258	N	1.000	P	.	.	1.53	T	-0.972	T	0.000	T	0.062	0.413	6.245	3.42	0.796	0.087	7.166	0.413339	NA	NA	0.765465	0.666818	ID=COSM1180633;OCCURENCE=1(upper_aerodigestive_tract)	0.652	NA	6.1611684
1036	12	48177906	48177906	C	T	exonic	HDAC7	NA	synonymous SNV	HDAC7:NM_001098416:exon24:c.G2775A:p.V925V,HDAC7:NM_015401:exon25:c.G2886A:p.V962V	exonic	ENSG00000061273	NA	synonymous SNV	ENSG00000061273:ENST00000354334:exon24:c.G2775A:p.V925V,ENSG00000061273:ENST00000552960:exon24:c.G2835A:p.V945V,ENSG00000061273:ENST00000080059:exon25:c.G2886A:p.V962V,ENSG00000061273:ENST00000427332:exon25:c.G2769A:p.V923V,ENSG00000061273:ENST00000380610:exon26:c.G3044A:p.X1015X	Score=435;Name=lod=78	NA	12q13.11	NA	NA	NA	NA	rs7306788	0.08	0.08	0.062	0.0714856	0.1769	0.002	0.0951	0.0197	0.0879	0.18	NA	0.1	0.02	0.1402	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.813737	NA	NA	0.188837	0.041761	NA	0.029	NA	6.1607296
1036	1	152192825	152192825	C	T	exonic	HRNR	NA	nonsynonymous SNV	HRNR:NM_001009931:exon3:c.G1280A:p.G427D	exonic	ENSG00000197915	NA	nonsynonymous SNV	ENSG00000197915:ENST00000368801:exon3:c.G1280A:p.G427D	NA	NA	1q21.3	NA	NA	NA	NA	rs6666097	0.4	0.4	0.371	0.345447	0.5855	0.2917	0.2795	0.2073	0.3875	0.59	0.32	0.36	0.22	0.4962	0.59	0.21	T	0.895	P	0.356	B	.	.	1.000	P	0.805	L	3.69	T	-0.886	T	0.004	T	0.089	0.676	7.616	0.311	0.181	-0.075	3.523	0.675748	NA	0.74	0.591047	0.259873	NA	0.333	NA	6.1605864
1036	17	39240511	39240511	A	T	exonic	KRTAP4-7	NA	nonsynonymous SNV	KRTAP4-7:NM_033061:exon1:c.A53T:p.D18V	exonic	ENSG00000240871	NA	nonsynonymous SNV	ENSG00000240871:ENST00000391417:exon1:c.A53T:p.D18V	NA	NA	17q21.2	NA	NA	NA	NA	rs383835	0.47	0.47	0.407	0.551717	0.6024	0.3879	0.6081	0.6445	0.5031	0.49	0.32	0.55	0.56	0.5705	0.56	0.12	T	0.043	B	0.007	B	0.273	U	1.000	P	.	.	6.25	T	-1.046	T	0.000	T	0.247	-0.89	0.459	-1.55	-0.591	0.065	2.819	-0.889937	NA	0.19	NA	NA	NA	NA	NA	6.1604334
1036	13	25272870	25272870	C	T	exonic	ATP12A	NA	synonymous SNV	ATP12A:NM_001185085:exon12:c.C1605T:p.I535I,ATP12A:NM_001676:exon12:c.C1587T:p.I529I	exonic	ENSG00000075673	NA	synonymous SNV	ENSG00000075673:ENST00000218548:exon12:c.C1605T:p.I535I,ENSG00000075673:ENST00000381946:exon12:c.C1587T:p.I529I	Score=529;Name=lod=188	NA	13q12.12	NA	NA	NA	NA	rs2289901	0.24	0.24	0.224	0.247804	0.175	0.1567	0.1556	0.4554	0.2014	0.18	0.16	0.17	0.46	0.1777	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.326856	NA	NA	0.153605	0.412846	NA	0.304	NA	6.1603616
1036	5	167919825	167919825	G	A	exonic	RARS	NA	synonymous SNV	RARS:NM_002887:exon3:c.G342A:p.Q114Q	exonic	ENSG00000113643	NA	synonymous SNV	ENSG00000113643:ENST00000231572:exon3:c.G342A:p.Q114Q,ENSG00000113643:ENST00000520013:exon3:c.G342A:p.Q114Q	Score=626;Name=lod=466	NA	5q34	NA	NA	NA	NA	rs2305728	0.1	0.1	0.096	0.0742812	0.1799	0.0645	0.0908	0.0091	0.0521	0.18	0.08	0.11	0.02	0.1374	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.933495	NA	NA	0.18907	0.036541	NA	0.043	NA	6.1602966
1036	5	167919726	167919726	A	G	exonic	RARS	NA	synonymous SNV	RARS:NM_002887:exon3:c.A243G:p.Q81Q	exonic	ENSG00000113643	NA	synonymous SNV	ENSG00000113643:ENST00000231572:exon3:c.A243G:p.Q81Q,ENSG00000113643:ENST00000520013:exon3:c.A243G:p.Q81Q,ENSG00000113643:ENST00000522834:exon3:c.A243G:p.Q81Q	Score=317;Name=lod=26	NA	5q34	NA	NA	NA	NA	rs2305727	0.1	0.1	0.085	0.0742812	0.1799	0.0645	0.0908	0.0091	0.0521	0.18	0.08	0.11	0.02	0.1373	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.218146	NA	NA	0.189186	0.036314	NA	0.058	NA	6.1602806
1036	19	41257423	41257423	C	T	intronic	SNRPA	NA	NA	NA	UTR5	ENSG00000188493	ENST00000596809:c.-6857G>A	NA	NA	NA	NA	19q13.2	NA	Name=HA-E2F1	Name=64	NA	rs77758833	0.02	0.02	0.028	0.0211661	NA	NA	0.0086	0.0756	NA	NA	NA	0.02	0.09	0.0062	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.261232	1.261232	NA	0.000349	0.061961	NA	0.014	NA	6.1601177
1036	19	15905206	15905206	T	C	exonic	OR10H5	NA	synonymous SNV	OR10H5:NM_001004466:exon1:c.T348C:p.T116T	exonic	ENSG00000172519	NA	synonymous SNV	ENSG00000172519:ENST00000308940:exon1:c.T348C:p.T116T	Score=558;Name=lod=248	NA	19p13.12	NA	NA	NA	NA	rs4808380	0.11	0.11	0.087	0.150559	0.162	0.1071	0.1167	0.143	0.2178	0.14	0.1	0.09	0.09	0.1759	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.174148	NA	NA	0.168721	0.144349	NA	0.022	NA	6.1600456
1036	5	167933060	167933060	A	G	exonic	RARS	NA	synonymous SNV	RARS:NM_002887:exon10:c.A1092G:p.V364V	exonic	ENSG00000113643	NA	synonymous SNV	ENSG00000113643:ENST00000538719:exon9:c.A474G:p.V158V,ENSG00000113643:ENST00000231572:exon10:c.A1092G:p.V364V	Score=557;Name=lod=245	NA	5q34	NA	NA	NA	NA	rs2305733	0.1	0.1	0.091	0.0744808	0.1799	0.0645	0.0908	0.0098	0.0521	0.18	0.08	0.11	0.02	0.1376	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.074426	NA	NA	0.189302	0.036768	NA	0.058	NA	6.1598646
1036	2	231738263	231738263	C	T	exonic	ITM2C	NA	synonymous SNV	ITM2C:NM_001012516:exon2:c.C252T:p.F84F,ITM2C:NM_030926:exon2:c.C252T:p.F84F	exonic	ENSG00000135916	NA	synonymous SNV	ENSG00000135916:ENST00000326407:exon2:c.C252T:p.F84F,ENSG00000135916:ENST00000326427:exon2:c.C252T:p.F84F,ENSG00000135916:ENST00000409704:exon2:c.C66T:p.F22F,ENSG00000135916:ENST00000418408:exon2:c.C66T:p.F22F,ENSG00000135916:ENST00000541852:exon2:c.C66T:p.F22F,ENSG00000135916:ENST00000543957:exon2:c.C66T:p.F22F,ENSG00000135916:ENST00000457215:exon3:c.C252T:p.F84F	Score=493;Name=lod=135	NA	2q37.1	Score=787;Name=V$ARNT_02	NA	NA	NA	rs2289234	0.54	0.54	0.502	0.509784	0.504	0.8155	0.5331	0.2277	0.5654	0.51	0.82	0.49	0.28	0.5193	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.009406	NA	NA	0.483605	0.249433	NA	0.399	NA	6.1597616
1036	1	12907837	12907837	C	T	exonic	HNRNPCL1,LOC649330	NA	synonymous SNV	LOC649330:NM_001146181:exon1:c.G306A:p.A102A,HNRNPCL1:NM_001013631:exon2:c.G306A:p.A102A	exonic	ENSG00000179172	NA	synonymous SNV	ENSG00000179172:ENST00000317869:exon2:c.G306A:p.A102A	Score=527;Name=lod=184	NA	1p36.21	NA	NA	NA	NA	rs1736811	NA	NA	0.522	0.00738818	0.005	NA	0.0072	0.0182	0.0031	NA	NA	NA	NA	0.5023	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.018164	NA	NA	NA	NA	NA	0.007	NA	6.1593666
1036	9	69238268	69238268	G	A	exonic	CBWD6	NA	synonymous SNV	CBWD6:NM_001085457:exon8:c.C624T:p.V208V	exonic	ENSG00000204790	NA	synonymous SNV	ENSG00000204790:ENST00000382399:exon7:c.C564T:p.V188V,ENSG00000204790:ENST00000377457:exon8:c.C624T:p.V208V,ENSG00000204790:ENST00000377449:exon9:c.C516T:p.V172V	Score=490;Name=lod=131	NA	9q21.11	NA	NA	NA	NA	rs71224226	NA	NA	0.264	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5073	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.478777	NA	NA	NA	NA	NA	NA	NA	6.1593666
1036	2	231738269	231738269	G	A	exonic	ITM2C	NA	synonymous SNV	ITM2C:NM_001012516:exon2:c.G258A:p.A86A,ITM2C:NM_030926:exon2:c.G258A:p.A86A	exonic	ENSG00000135916	NA	synonymous SNV	ENSG00000135916:ENST00000326407:exon2:c.G258A:p.A86A,ENSG00000135916:ENST00000326427:exon2:c.G258A:p.A86A,ENSG00000135916:ENST00000409704:exon2:c.G72A:p.A24A,ENSG00000135916:ENST00000418408:exon2:c.G72A:p.A24A,ENSG00000135916:ENST00000541852:exon2:c.G72A:p.A24A,ENSG00000135916:ENST00000543957:exon2:c.G72A:p.A24A,ENSG00000135916:ENST00000457215:exon3:c.G258A:p.A86A	Score=493;Name=lod=135	NA	2q37.1	Score=954;Name=V$AREB6_01	NA	NA	NA	rs2289233	0.54	0.54	0.506	0.509385	0.504	0.8135	0.5331	0.2277	0.5654	0.51	0.82	0.49	0.28	0.5193	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.714263	NA	NA	0.484302	0.249887	NA	0.399	NA	6.1590646
1036	5	141051236	141051236	C	T	exonic	ARAP3	NA	synonymous SNV	ARAP3:NM_022481:exon12:c.G1755A:p.A585A	exonic	ENSG00000120318	NA	synonymous SNV	ENSG00000120318:ENST00000513878:exon6:c.G741A:p.A247A,ENSG00000120318:ENST00000239440:exon12:c.G1755A:p.A585A,ENSG00000120318:ENST00000508305:exon12:c.G1521A:p.A507A	NA	NA	5q31.3	Score=799;Name=V$ARP1_01	NA	NA	NA	rs12514851	0.17	0.17	0.14	0.183307	0.173	0.1389	0.2925	0.1286	0.2362	0.17	0.15	0.25	0.13	0.1878	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.681489	NA	NA	0.147674	0.141625	NA	0.123	NA	6.1581926
1036	5	118484804	118484804	G	A	exonic	DMXL1	NA	synonymous SNV	DMXL1:NM_005509:exon18:c.G3282A:p.E1094E	exonic	ENSG00000172869	NA	synonymous SNV	ENSG00000172869:ENST00000311085:exon18:c.G3282A:p.E1094E,ENSG00000172869:ENST00000539542:exon18:c.G3282A:p.E1094E	Score=646;Name=lod=563	NA	5q23.1	Score=873;Name=V$HNF3B_01	NA	NA	NA	rs7734532	0.63	0.63	0.59	0.618211	0.4781	0.9524	0.6268	0.4584	0.6278	0.48	0.97	0.58	0.49	0.5545	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.250294	NA	NA	0.476047	0.484105	NA	0.529	NA	6.1580196
1036	17	44249096	44249096	A	C	exonic	KANSL1	NA	synonymous SNV	KANSL1:NM_001193466:exon2:c.T414G:p.L138L,KANSL1:NM_015443:exon2:c.T414G:p.L138L,KANSL1:NM_001193465:exon3:c.T414G:p.L138L	exonic	ENSG00000120071	NA	synonymous SNV	ENSG00000120071:ENST00000432791:exon1:c.T414G:p.L138L,ENSG00000120071:ENST00000575318:exon1:c.T414G:p.L138L,ENSG00000120071:ENST00000262419:exon2:c.T414G:p.L138L,ENSG00000120071:ENST00000572904:exon2:c.T414G:p.L138L,ENSG00000120071:ENST00000574590:exon2:c.T414G:p.L138L,ENSG00000120071:ENST00000574655:exon3:c.T414G:p.L138L	Score=827;Name=lod=3069	NA	17q21.31	NA	NA	NA	NA	rs17662889	0.1	0.1	0.084	0.0726837	0.1998	0.001	0.1398	0.0113	0.0511	0.19	0.0017	0.16	0.02	0.1252	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.093704	NA	NA	0.184651	0.038357	NA	0.043	NA	6.1570156
1036	3	118864997	118864997	A	G	UTR5	C3orf30	NM_152539:c.-40A>G	NA	NA	UTR5	ENSG00000163424	ENST00000295622:c.-40A>G	NA	NA	Score=284;Name=lod=19	NA	3q13.32	Score=873;Name=V$RFX1_01	NA	NA	NA	rs72953098	0.1	0.1	0.059	0.0886581	0.0527	0.0774	0.2205	0.0908	0.0409	0.05	0.09	0.21	0.11	0.0751	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.26369	3.26369	NA	0.04965	0.076626	NA	0.087	NA	6.1558834
1036	17	76421467	76421467	A	G	exonic	DNAH17	NA	synonymous SNV	DNAH17:NM_173628:exon80:c.T13101C:p.P4367P	exonic	ENSG00000187775	NA	synonymous SNV	ENSG00000187775:ENST00000389840:exon80:c.T13170C:p.P4390P,ENSG00000187775:ENST00000585328:exon80:c.T13086C:p.P4362P	NA	NA	17q25.3	Score=701;Name=V$P53_01	NA	NA	NA	rs36119275	0.14	0.14	0.134	0.148562	0.1809	0.0248	0.134	0.2315	0.1411	0.18	0.03	0.15	0.22	0.1567	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.253127	NA	NA	0.173372	0.234226	NA	0.217	NA	6.1556946
1036	3	133524591	133524591	A	G	UTR5	SRPRB	NM_021203:c.-102A>G	NA	NA	UTR5	ENSG00000144867	ENST00000466490:c.-102A>G,ENST00000484684:c.-102A>G	NA	NA	NA	NA	3q22.1	NA	Name=ZBTB33,ETS1,TAF1,Pol2(b),Znf143_(16618-1-AP),YY1_(C-20),HA-E2F1,E2F6,Pol2-4H8,Mxi1_(bHLH),Pol2,Pol2(phosphoS2),YY1,PAX5-C20,SIX5,CCNT2,c-Myc,Max,NFKB,ELF1_(SC-631),TBP,CHD2_(N-1250),Nrf1	Name=148	NA	rs60142346	0.23	0.23	0.207	0.240016	0.1779	0.4841	0.1801	0.031	0.3773	0.18	0.48	0.19	0.05	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.576843	NA	NA	NA	NA	NA	0.167	NA	6.1554334
1036	17	76421464	76421464	C	T	exonic	DNAH17	NA	synonymous SNV	DNAH17:NM_173628:exon80:c.G13104A:p.P4368P	exonic	ENSG00000187775	NA	synonymous SNV	ENSG00000187775:ENST00000389840:exon80:c.G13173A:p.P4391P,ENSG00000187775:ENST00000585328:exon80:c.G13089A:p.P4363P	NA	NA	17q25.3	Score=701;Name=V$P53_01	NA	NA	NA	rs35422926	0.14	0.14	0.132	0.148562	0.1809	0.0248	0.134	0.2315	0.1411	0.18	0.03	0.15	0.22	0.1567	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.517488	NA	NA	0.173837	0.234453	NA	0.217	NA	6.1552296
1036	2	44201376	44201376	T	C	exonic	LRPPRC	NA	synonymous SNV	LRPPRC:NM_133259:exon9:c.A1068G:p.Q356Q	exonic	ENSG00000138095	NA	synonymous SNV	ENSG00000138095:ENST00000260665:exon9:c.A1068G:p.Q356Q,ENSG00000138095:ENST00000409659:exon9:c.A1068G:p.Q356Q,ENSG00000138095:ENST00000409946:exon9:c.A1068G:p.Q356Q,ENSG00000138095:ENST00000447246:exon9:c.A990G:p.Q330Q	NA	NA	2p21	NA	NA	NA	NA	rs4953042	0.23	0.23	0.189	0.255791	0.1521	0.5198	0.2666	0.025	0.3947	0.15	0.51	0.24	0.03	0.2099	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.894074	NA	NA	0.149535	0.048116	NA	0.217	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117555.2;CLNDSDB=.;CLNDSDBID=.	6.1551316
1037	2	132277686	132277686	C	T	ncRNA_exonic	LOC150776	NA	NA	NA	ncRNA_exonic	ENSG00000152117	NA	NA	NA	Score=542;Name=lod=213	NA	2q21.1	Score=897;Name=V$TAL1BETAITF2_01,V$TAL1ALPHAE47_01,V$TAL1BETAE47_01	NA	NA	NA	rs9287520	0.34	0.34	0.296	0.334665	0.2197	0.6806	0.4265	0.1346	0.3016	0.21	0.65	0.39	0.13	0.2923	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.467387	1.467387	NA	NA	NA	NA	0.29	NA	6.1546666
1037	8	144660046	144660046	G	A	exonic	NAPRT1	NA	synonymous SNV	NAPRT1:NM_145201:exon2:c.C294T:p.A98A	exonic	ENSG00000147813	NA	synonymous SNV	ENSG00000147813:ENST00000276844:exon2:c.C294T:p.A98A,ENSG00000147813:ENST00000340490:exon2:c.C294T:p.A98A,ENSG00000147813:ENST00000426292:exon2:c.C294T:p.A98A,ENSG00000147813:ENST00000435154:exon2:c.C294T:p.A98A,ENSG00000147813:ENST00000449291:exon2:c.C294T:p.A98A	NA	NA	8q24.3	NA	NA	Name=3	NA	rs896954	0.15	0.15	0.145	0.155152	0.169	0.0933	0.255	0.0749	0.2423	0.19	0.11	0.24	0.09	0.1861	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.686169	1.686169	NA	0.159277	0.097083	NA	0.072	NA	6.1522896
1037	16	2160503	2160503	T	G	exonic	PKD1	NA	synonymous SNV	PKD1:NM_000296:exon15:c.A4665C:p.A1555A,PKD1:NM_001009944:exon15:c.A4665C:p.A1555A	exonic	ENSG00000008710	NA	synonymous SNV	ENSG00000008710:ENST00000262304:exon15:c.A4665C:p.A1555A,ENSG00000008710:ENST00000423118:exon15:c.A4665C:p.A1555A	Score=420;Name=lod=68	NA	16p13.3	NA	NA	NA	NA	rs71385734	0.21	0.21	0.213	0.221645	0.167	NA	0.1787	0.556	0.0849	0.17	NA	0.2	0.52	0.1687	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.384432	NA	NA	0.179096	0.484973	ID=COSM1376565;OCCURENCE=1(large_intestine)	0.304	NA	6.1518706
1037	3	108107925	108107925	C	A	intronic	MYH15	NA	NA	NA	intronic	ENSG00000144821	NA	NA	NA	Score=325;Name=lod=28	NA	3q13.13	NA	Name=EBF1_(C-8),PAX5-C20	Name=29	NA	rs7616341	0.2	0.2	0.192	0.204073	0.3111	0.0119	0.2003	0.2383	0.2485	0.32	0.0035	0.24	0.22	0.2488	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.67049	2.67049	NA	0.288844	0.228158	NA	0.203	NA	6.151256
1037	10	45622885	45622885	C	T	ncRNA_intronic	RSU1P2	NA	NA	NA	ncRNA_exonic	ENSG00000235690	NA	NA	NA	Score=409;Name=lod=61	NA	10q11.21	Score=806;Name=V$PAX4_01	NA	NA	NA	rs3740099	0.54	0.54	0.487	0.52496	0.5159	0.5377	0.647	0.5507	0.3998	0.52	0.51	0.61	0.55	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.086271	NA	NA	NA	NA	ID=COSN163641;OCCURENCE=1(breast)	0.514	NA	6.1507666
1037	22	30921371	30921371	T	C	exonic	SEC14L6	NA	synonymous SNV	SEC14L6:NM_001193336:exon11:c.A1047G:p.E349E	exonic	ENSG00000214491	NA	synonymous SNV	ENSG00000214491:ENST00000402034:exon11:c.A1047G:p.E349E	Score=410;Name=lod=62	NA	22q12.2	NA	NA	NA	NA	rs6518698	0.29	0.29	0.261	0.289337	0.2565	0.1399	0.3329	0.4811	0.1871	0.26	0.13	0.29	0.5	0.2595	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.020107	NA	NA	NA	NA	NA	0.196	NA	6.1506666
1037	12	100709420	100709420	C	T	exonic	SCYL2	NA	synonymous SNV	SCYL2:NM_017988:exon9:c.C1180T:p.L394L	exonic	ENSG00000136021	NA	synonymous SNV	ENSG00000136021:ENST00000360820:exon9:c.C1180T:p.L394L,ENSG00000136021:ENST00000549687:exon9:c.C1180T:p.L394L	Score=730;Name=lod=1230	NA	12q23.1	NA	NA	NA	NA	rs10860577	0.11	0.11	0.111	0.110423	0.1998	0.003	0.1239	0.1263	0.0982	0.19	0.0035	0.12	0.13	0.1373	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.052591	NA	NA	0.179186	0.121652	NA	0.138	NA	6.1503806
1037	17	27896307	27896307	C	T	intronic	TP53I13	NA	NA	NA	ncRNA_intronic	ENSG00000264031	NA	NA	NA	NA	NA	17q11.2	NA	Name=TCF4	Name=83	NA	rs77532430	0.03	0.03	0.015	0.033746	0.0616	0.0099	0.036	0.0015	0.0716	0.06	0.0017	0.04	0.0041	0.0531	0.069	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.48903	2.48903	NA	0.068519	0.014721	NA	0.007	NA	6.1501143
1037	14	71062435	71062435	C	T	intronic	MED6	NA	NA	NA	ncRNA_exonic	ENSG00000258951	NA	NA	NA	Score=569;Name=lod=274	NA	14q24.2	NA	Name=CTCF	NA	NA	rs1962312	0.4	0.4	0.405	0.410543	0.1839	0.5605	0.1974	0.6959	0.2546	0.18	0.56	0.19	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.014652	NA	NA	NA	NA	NA	0.442	NA	6.1494333
1037	19	13002400	13002400	G	C	intronic	GCDH	NA	NA	NA	exonic	ENSG00000105607	NA	nonsynonymous SNV	ENSG00000105607:ENST00000590445:exon3:c.G191C:p.W64S	NA	NA	19p13.2	NA	Name=NFKB	Name=5	NA	rs1799918	0.25	0.25	0.213	0.253195	0.327	0.1478	0.4236	0.1815	0.2618	0.31	0.14	0.4	0.16	0.3268	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.874614	NA	NA	0.363922	0.229769	NA	0.246	NA	6.1489447
1037	2	220315970	220315970	G	A	exonic	SPEG	NA	synonymous SNV	SPEG:NM_005876:exon5:c.G2226A:p.K742K	exonic	ENSG00000072195	NA	synonymous SNV	ENSG00000072195:ENST00000312358:exon5:c.G2226A:p.K742K,ENSG00000072195:ENST00000396698:exon6:c.G1914A:p.K638K	Score=409;Name=lod=61	NA	2q35	Score=973;Name=V$NKX25_01	NA	NA	NA	rs10932806	0.47	0.47	0.437	0.432308	0.5119	0.6716	0.4914	0.1392	0.4581	0.5	0.66	0.49	0.17	0.4904	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.026229	NA	NA	0.515501	0.19227	NA	0.319	NA	6.1488656
1037	11	63885305	63885305	C	T	exonic	FLRT1	NA	synonymous SNV	FLRT1:NM_013280:exon2:c.C1566T:p.P522P	exonic	ENSG00000126500	NA	synonymous SNV	ENSG00000126500:ENST00000246841:exon2:c.C1566T:p.P522P	NA	NA	11q13.1	Score=840;Name=V$CEBP_C	NA	NA	NA	rs3824854	0.17	0.17	0.14	0.145567	0.174	0.1815	0.3055	0.0673	0.0716	0.17	0.18	0.27	0.07	0.1699	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.629337	NA	NA	0.174075	0.088369	NA	0.123	NA	6.1486916
1037	20	30193538	30193538	A	G	exonic	ID1	NA	synonymous SNV	ID1:NM_002165:exon1:c.A348G:p.G116G,ID1:NM_181353:exon1:c.A348G:p.G116G	exonic	ENSG00000125968	NA	synonymous SNV	ENSG00000125968:ENST00000376105:exon1:c.A348G:p.G116G,ENSG00000125968:ENST00000376112:exon1:c.A348G:p.G116G	NA	NA	20q11.21	NA	Name=Pol2-4H8,Pol2(b),HEY1,Pol2	NA	NA	rs15817	0.28	0.28	0.289	0.286741	0.16	NA	0.1859	0.8389	0.0378	0.16	NA	0.2	0.83	0.2009	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.525674	NA	NA	0.157478	0.689741	NA	0.319	NA	6.1482886
1037	20	30157026	30157026	A	G	ncRNA_UTR3	HM13	NA	NA	NA	ncRNA_UTR3	ENSG00000101294	NA	NA	NA	NA	NA	20q11.21	NA	Name=SMC3_(ab9263),CTCF,RXRA,GR,Rad21,CTCF_(SC-5916),FOSL2	Name=16	NA	rs4607	0.26	0.26	0.248	0.272963	0.1571	NA	0.1816	0.7912	0.0378	0.16	NA	0.2	0.77	0.21	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.003745	NA	NA	0.151469	0.649818	NA	0.326	NA	6.1480976
1037	12	122079189	122079189	C	T	exonic	ORAI1	NA	synonymous SNV	ORAI1:NM_032790:exon2:c.C552T:p.I184I	exonic	ENSG00000182500	NA	synonymous SNV	ENSG00000182500:ENST00000330079:exon2:c.C552T:p.I184I,ENSG00000182500:ENST00000537188:exon2:c.C237T:p.I79I	Score=511;Name=lod=159	NA	12q24.31	NA	NA	NA	NA	rs3741595	0.16	0.16	0.151	0.203874	0.1551	0.2599	0.2651	0.0635	0.3425	0.15	0.21	0.24	0.07	0.1968	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.766421	NA	NA	0.167093	0.086019	NA	0.123	NA	6.1476736
1037	19	15905639	15905639	C	T	exonic	OR10H5	NA	synonymous SNV	OR10H5:NM_001004466:exon1:c.C781T:p.L261L	exonic	ENSG00000172519	NA	synonymous SNV	ENSG00000172519:ENST00000308940:exon1:c.C781T:p.L261L	Score=376;Name=lod=45	NA	19p13.12	NA	NA	NA	NA	rs3746151	0.14	0.14	0.112	0.152556	0.161	0.122	0.1153	0.1422	0.2157	0.17	0.14	0.1	0.15	0.1779	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.714747	NA	NA	0.180116	0.154335	NA	0.101	NA	6.1476506
1037	11	6502636	6502636	G	C	UTR5	ARFIP2	NM_001242856:c.-1375C>G,NM_001242855:c.-1353C>G,NM_001242854:c.-985C>G,NM_012402:c.-985C>G	NA	NA	UTR5	ENSG00000132254	ENST00000396777:c.-985C>G,ENST00000423813:c.-1353C>G	NA	NA	NA	NA	11p15.4	NA	Name=USF-1,Nrf1,THAP1_(SC-98174),TBP,IRF1,c-Myc,CCNT2,AP-2gamma,PAX5-N19,SREBP2,PAX5-C20,SIX5,SRF,RFX5_(N-494),YY1,Pol2-4H8,FOSL2,JunD,Pol2(b),ELK4,CHD2_(N-1250),GTF2F1_(RAP-74),Max,ELF1_(SC-631),SP1,Mxi1_(bHLH),PU.1,Pol2,Pol2(phosphoS2),BRCA1_(C-1863),YY1_(C-20),TR4,eGFP-JunD,ETS1,SREBP1,GATA-1,SP2_(SC-643),ZBTB33,HMGN3,GABP	Name=148	NA	rs11600431	0.17	0.17	0.191	0.1877	0.1869	0.0327	0.1729	0.2852	0.227	0.19	0.04	0.16	0.3	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.306022	NA	NA	NA	NA	NA	0.304	NA	6.1464334
1037	18	45566276	45566276	G	A	exonic	ZBTB7C	NA	synonymous SNV	ZBTB7C:NM_001039360:exon2:c.C1203T:p.F401F	exonic	ENSG00000184828	NA	synonymous SNV	ENSG00000184828:ENST00000332053:exon1:c.C1203T:p.F401F,ENSG00000184828:ENST00000535628:exon2:c.C1203T:p.F401F,ENSG00000184828:ENST00000586438:exon2:c.C1203T:p.F401F,ENSG00000184828:ENST00000588982:exon3:c.C1203T:p.F401F,ENSG00000184828:ENST00000590800:exon4:c.C1203T:p.F401F	Score=601;Name=lod=369	NA	18q21.1	NA	NA	NA	NA	rs80109066	0.21	0.21	0.181	0.196486	0.174	0.2252	0.1988	0.2632	0.0982	0.18	0.23	0.2	0.23	0.1811	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.729997	NA	NA	0.166279	0.256468	NA	0.159	NA	6.1452876
1037	2	201785837	201785837	G	A	exonic	ORC2	NA	synonymous SNV	ORC2:NM_006190:exon14:c.C1173T:p.L391L	exonic	ENSG00000115942	NA	synonymous SNV	ENSG00000115942:ENST00000234296:exon14:c.C1173T:p.L391L	Score=687;Name=lod=829	NA	2q33.1	NA	NA	NA	NA	rs2307362	0.19	0.19	0.207	0.191693	0.1928	0.0139	0.147	0.4486	0.0583	0.2	0.0035	0.15	0.41	0.158	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.958426	NA	NA	0.170814	0.371993	NA	0.21	NA	6.1450526
1038	16	5145474	5145474	C	T	exonic	FAM86A	NA	synonymous SNV	FAM86A:NM_201400:exon2:c.G138A:p.L46L,FAM86A:NM_201598:exon2:c.G138A:p.L46L	exonic	ENSG00000118894	NA	synonymous SNV	ENSG00000118894:ENST00000427587:exon2:c.G138A:p.L46L,ENSG00000118894:ENST00000458008:exon2:c.G138A:p.L46L,ENSG00000118894:ENST00000585436:exon2:c.G138A:p.L46L,ENSG00000118894:ENST00000587133:exon2:c.G138A:p.L46L,ENSG00000118894:ENST00000587200:exon2:c.G138A:p.L46L	Score=391;Name=lod=52	NA	16p13.3	NA	NA	NA	NA	rs7192650	0.13	0.13	0.115	0.108027	0.1889	0.1161	0.2032	0.034	0.0491	0.18	0.12	0.18	0.04	0.1535	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.325935	NA	NA	0.179935	0.057351	NA	0.014	NA	6.1443316
1038	11	89392799	89392799	G	A	UTR5	FOLH1B	NM_153696:c.-9778G>A	NA	NA	ncRNA_exonic	ENSG00000134612	NA	NA	NA	Score=635;Name=lod=510	NA	11q14.3	Score=852;Name=V$TAL1BETAE47_01	NA	NA	NA	rs10830330	0.22	0.22	0.202	0.202077	0.3559	0.0853	0.2248	0.1331	0.2413	0.34	0.09	0.27	0.15	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.190133	2.190133	NA	NA	NA	NA	0.283	NA	6.1441
1038	1	153004848	153004848	T	C	exonic	SPRR1B	NA	synonymous SNV	SPRR1B:NM_003125:exon2:c.T27C:p.P9P	exonic	ENSG00000169469	NA	synonymous SNV	ENSG00000169469:ENST00000392661:exon1:c.T27C:p.P9P,ENSG00000169469:ENST00000307098:exon2:c.T27C:p.P9P	Score=420;Name=lod=68	NA	1q21.3	NA	Name=PAX5-N19	NA	NA	rs3795381	0.52	0.52	0.497	0.49401	0.5099	0.5913	0.4251	0.4402	0.499	0.51	0.62	0.46	0.46	0.5025	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.846404	NA	NA	0.510698	0.46936	NA	0.449	NA	6.1435686
1038	19	39416887	39416887	C	T	exonic	SARS2	NA	synonymous SNV	SARS2:NM_001145901:exon2:c.G321A:p.E107E,SARS2:NM_017827:exon2:c.G321A:p.E107E	exonic	ENSG00000104835,ENSG00000269547	NA	synonymous SNV	ENSG00000104835:ENST00000221431:exon2:c.G321A:p.E107E,ENSG00000104835:ENST00000430193:exon2:c.G321A:p.E107E,ENSG00000104835:ENST00000455102:exon2:c.G321A:p.E107E,ENSG00000104835:ENST00000598343:exon2:c.G321A:p.E107E,ENSG00000104835:ENST00000600042:exon2:c.G321A:p.E107E,ENSG00000104835:ENST00000448145:exon6:c.G321A:p.E107E	Score=496;Name=lod=138	NA	19q13.2	NA	NA	NA	NA	rs11544093	0.2	0.2	0.164	0.189896	0.1879	0.3313	0.1556	0.087	0.2096	0.19	0.33	0.15	0.08	0.1773	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.636752	NA	NA	0.15907	0.095098	NA	0.116	NA	6.1423966
1038	18	50936994	50936994	T	C	exonic	DCC	NA	synonymous SNV	DCC:NM_005215:exon20:c.T3108C:p.P1036P	exonic	ENSG00000187323	NA	synonymous SNV	ENSG00000187323:ENST00000581580:exon17:c.T2013C:p.P671P,ENSG00000187323:ENST00000412726:exon20:c.T2592C:p.P864P,ENSG00000187323:ENST00000442544:exon20:c.T3108C:p.P1036P	Score=527;Name=lod=184	NA	18q21.2	Score=773;Name=V$LUN1_01	NA	NA	NA	rs2229082	0.35	0.35	0.331	0.310304	0.5368	0.2262	0.3127	0.174	0.3466	0.53	0.23	0.37	0.18	0.4517	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.005549	NA	NA	0.535822	0.240808	NA	0.406	NA	6.1423446
1038	12	3387697	3387697	T	C	exonic	TSPAN9	NA	synonymous SNV	TSPAN9:NM_001168320:exon3:c.T174C:p.I58I,TSPAN9:NM_006675:exon4:c.T174C:p.I58I	exonic	ENSG00000011105	NA	synonymous SNV	ENSG00000011105:ENST00000407263:exon2:c.T174C:p.I58I,ENSG00000011105:ENST00000537971:exon3:c.T174C:p.I58I,ENSG00000011105:ENST00000011898:exon4:c.T174C:p.I58I	Score=378;Name=lod=46	NA	12p13.32	NA	NA	NA	NA	rs16930370	0.18	0.18	0.193	0.172724	0.1839	0.1022	0.1571	0.2761	0.1053	0.18	0.11	0.18	0.27	0.164	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.376779	NA	NA	0.176977	0.283931	NA	0.355	NA	6.1417896
1038	3	152554357	152554357	A	G	exonic	P2RY1	NA	synonymous SNV	P2RY1:NM_002563:exon1:c.A786G:p.V262V	exonic	ENSG00000169860	NA	synonymous SNV	ENSG00000169860:ENST00000305097:exon1:c.A786G:p.V262V	Score=567;Name=lod=268	NA	3q25.2	NA	NA	NA	NA	rs701265	0.34	0.34	0.365	0.365415	0.163	0.248	0.2651	0.7852	0.1984	0.16	0.27	0.22	0.77	0.2152	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.415042	NA	NA	0.147791	0.677031	NA	0.457	NA	6.1406756
1038	6	158507981	158507981	G	A	exonic	SYNJ2	NA	synonymous SNV	SYNJ2:NM_001178088:exon22:c.G2592A:p.R864R,SYNJ2:NM_003898:exon23:c.G3303A:p.R1101R	exonic	ENSG00000078269	NA	synonymous SNV	ENSG00000078269:ENST00000367112:exon6:c.G558A:p.R186R,ENSG00000078269:ENST00000355585:exon23:c.G3303A:p.R1101R,ENSG00000078269:ENST00000367121:exon23:c.G3303A:p.R1101R	Score=540;Name=lod=208	NA	6q25.3	Score=798;Name=V$CDPCR3_01	NA	NA	NA	rs2296506	0.53	0.53	0.554	0.527955	0.5099	0.5913	0.3386	0.5719	0.5562	0.53	0.56	0.37	0.6	0.5079	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.210513	NA	NA	0.508256	0.55379	ID=COSM450805;OCCURENCE=1(breast)	0.551	NA	6.1406106
1038	9	100823084	100823084	T	C	exonic	NANS	NA	synonymous SNV	NANS:NM_018946:exon2:c.T153C:p.A51A	exonic	ENSG00000095380	NA	synonymous SNV	ENSG00000095380:ENST00000210444:exon2:c.T153C:p.A51A	Score=597;Name=lod=356	NA	9q22.33	Score=730;Name=V$PAX4_04	NA	NA	NA	rs13049	0.56	0.56	0.549	0.640775	0.4781	0.3323	0.6643	0.9327	0.7147	0.48	0.33	0.6	0.91	0.5482	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.628551	1.628551	NA	0.500465	0.866092	NA	0.652	NA	6.1399016
1038	12	7585971	7585971	A	G	exonic	CD163L1	NA	synonymous SNV	CD163L1:NM_174941:exon3:c.T444C:p.Y148Y	exonic	ENSG00000177675	NA	synonymous SNV	ENSG00000177675:ENST00000313599:exon3:c.T444C:p.Y148Y,ENSG00000177675:ENST00000396630:exon3:c.T444C:p.Y148Y,ENSG00000177675:ENST00000416109:exon3:c.T444C:p.Y148Y,ENSG00000177675:ENST00000543276:exon4:c.T156C:p.Y52Y	NA	NA	12p13.31	NA	Name=STAT3,c-Jun,c-Fos,FOSL2,JunD	Name=100	NA	rs10845159	0.36	0.36	0.335	0.286941	0.5457	0.3413	0.3458	0.0242	0.2781	0.55	0.37	0.39	0.03	0.4321	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.116957	NA	NA	0.549419	0.113936	NA	0.341	NA	6.1394476
1038	1	42619139	42619139	A	G	exonic	GUCA2B	NA	synonymous SNV	GUCA2B:NM_007102:exon1:c.A18G:p.A6A	exonic	ENSG00000044012	NA	synonymous SNV	ENSG00000044012:ENST00000372581:exon1:c.A18G:p.A6A	NA	NA	1p34.2	NA	Name=NRSF	NA	NA	rs1047047	0.29	0.29	0.29	0.315495	0.165	0.4038	0.2896	0.4614	0.2004	0.16	0.38	0.24	0.45	0.2124	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.451234	NA	NA	0.15093	0.386064	NA	0.399	NA	6.1383366
1038	6	32629868	32629868	A	G	exonic	HLA-DQB1	NA	synonymous SNV	HLA-DQB1:NM_001243961:exon3:c.T537C:p.L179L,HLA-DQB1:NM_002123:exon3:c.T537C:p.L179L	exonic	ENSG00000179344	NA	synonymous SNV	ENSG00000179344:ENST00000399082:exon2:c.T267C:p.L89L,ENSG00000179344:ENST00000374943:exon3:c.T537C:p.L179L,ENSG00000179344:ENST00000399079:exon3:c.T537C:p.L179L,ENSG00000179344:ENST00000434651:exon3:c.T537C:p.L179L,ENSG00000179344:ENST00000399084:exon4:c.T537C:p.L179L	NA	NA	6p21.32	Score=864;Name=V$BRN2_01	NA	NA	NA	rs1049088	0.18	0.18	0.131	0.205072	0.1909	0.2331	0.1484	0.2201	0.2106	0.19	0.14	0.17	0.21	0.1757	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.307633	NA	NA	0.162363	0.193306	NA	0.145	NA	6.1377036
1038	6	24403196	24403196	T	C	UTR5	MRS2	NM_020662:c.-79T>C	NA	NA	UTR5	ENSG00000124532	ENST00000274747:c.-79T>C,ENST00000543597:c.-15153T>C,ENST00000535061:c.-79T>C,ENST00000378386:c.-79T>C,ENST00000378353:c.-79T>C,ENST00000443868:c.-79T>C	NA	NA	NA	NA	6p22.3	NA	Name=FOXA1_(C-20),TAF1,E2F6_(H-50),ZNF263,Pol2-4H8,E2F6,Pol2,NRSF,Mxi1_(bHLH),YY1,Pol2(phosphoS2),Max,FOXA1_(SC-101058),ELF1_(SC-631),NFKB,HEY1,ZEB1_(SC-25388),FOXA2_(SC-6554),TBP,GTF2F1_(RAP-74),IRF1,Nrf1	Name=145	NA	rs79747846	0.13	0.13	0.118	0.119808	0.1958	0.1488	0.1023	0.025	0.1524	0.2	0.16	0.09	0.02	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.516517	1.516517	NA	NA	NA	NA	0.101	NA	6.1375334
1038	17	43011908	43011908	G	A	exonic	KIF18B	NA	synonymous SNV	KIF18B:NM_001264573:exon5:c.C654T:p.N218N,KIF18B:NM_001265577:exon5:c.C654T:p.N218N	exonic	ENSG00000186185	NA	synonymous SNV	ENSG00000186185:ENST00000438933:exon4:c.C654T:p.N218N,ENSG00000186185:ENST00000590129:exon4:c.C681T:p.N227N,ENSG00000186185:ENST00000339151:exon5:c.C654T:p.N218N,ENSG00000186185:ENST00000587309:exon5:c.C654T:p.N218N,ENSG00000186185:ENST00000593135:exon5:c.C654T:p.N218N	NA	NA	17q21.31	NA	Name=Pol2	NA	NA	rs755547	0.12	0.12	0.133	0.121605	0.166	0.0129	0.1369	0.1188	0.181	0.16	0.01	0.17	0.15	0.1692	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.517505	NA	NA	0.19436	0.139636	ID=COSM436717;OCCURENCE=2(breast)	0.109	NA	6.1371066
1038	17	4636565	4636565	T	G	UTR3	MED11	NM_001001683:c.*83T>G	NA	NA	UTR3	ENSG00000161920	ENST00000575284:c.*290T>G,ENST00000293777:c.*83T>G	NA	NA	NA	NA	17p13.2	NA	Name=Rad21,CTCF,EBF1_(C-8)	Name=21	NA	rs8123	0.24	0.24	0.212	0.251797	0.1968	0.3075	0.2839	0.1823	0.3221	0.2	0.3	0.31	0.17	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.292277	NA	NA	NA	NA	NA	0.225	NA	6.1365334
1038	7	28997141	28997141	G	C	exonic	TRIL	NA	unknown	UNKNOWN	ncRNA_exonic	ENSG00000176734,ENSG00000255690	NA	NA	NA	Score=352;Name=lod=36	NA	7p14.3	NA	NA	Name=21	NA	rs6950750	0.32	0.32	0.28	0.327276	0.2147	0.6091	0.2637	0.236	0.3211	0.21	0.61	0.24	0.22	0.272	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.827255	NA	NA	0.210463	0.232955	NA	0.188	NA	6.1361703
1038	15	101110302	101110302	C	G	exonic	LINS	NA	nonsynonymous SNV	LINS:NM_001040616:exon7:c.G1415C:p.S472T	exonic	ENSG00000140471	NA	nonsynonymous SNV	ENSG00000140471:ENST00000314742:exon7:c.G1415C:p.S472T	NA	NA	15q26.3	NA	NA	NA	NA	rs2411837	0.28	0.28	0.277	0.254792	0.4215	0.2252	0.2219	0.115	0.3262	0.43	0.23	0.25	0.14	0.3438	0.43	0.07	T	0.372	B	0.114	B	0.950	N	1.000	P	1.39	L	2.22	T	-0.912	T	0.000	T	0.031	0.415	6.256	1.52	0.285	-0.174	8.292	0.415431	NA	0.08	0.432194	0.156832	ID=COSM147995;OCCURENCE=1(stomach)	0.297	NA	6.1358394
1038	17	80044211	80044211	G	A	exonic	FASN	NA	synonymous SNV	FASN:NM_004104:exon22:c.C3651T:p.G1217G	exonic	ENSG00000169710	NA	synonymous SNV	ENSG00000169710:ENST00000306749:exon22:c.C3651T:p.G1217G	Score=381;Name=lod=47	NA	17q25.3	NA	NA	NA	NA	rs41283365	0.09	0.09	0.091	0.0650958	0.172	0.004	0.0965	0.0098	0.0706	0.18	NA	0.12	0.02	0.1687	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.531366	NA	NA	0.190498	0.037827	NA	0.094	NA	6.1354686
1038	15	91312823	91312823	T	C	intronic	BLM	NA	NA	NA	intronic	ENSG00000197299	NA	NA	NA	Score=458;Name=lod=97	NA	15q26.1	NA	NA	Name=3	NA	rs3815003	0.36	0.36	0.352	0.366613	0.2913	0.3185	0.2435	0.6747	0.1646	0.28	0.31	0.25	0.64	0.2956	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.18872	NA	NA	0.277687	0.58576	NA	0.348	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000078057.3;CLNDSDB=.;CLNDSDBID=.	6.135413
1039	19	7747445	7747445	G	A	exonic	TRAPPC5	NA	synonymous SNV	TRAPPC5:NM_001042461:exon2:c.G306A:p.A102A,TRAPPC5:NM_001042462:exon2:c.G306A:p.A102A,TRAPPC5:NM_174894:exon2:c.G306A:p.A102A	exonic	ENSG00000181029	NA	synonymous SNV	ENSG00000181029:ENST00000317378:exon2:c.G306A:p.A102A,ENSG00000181029:ENST00000426877:exon2:c.G306A:p.A102A,ENSG00000181029:ENST00000595985:exon2:c.G105A:p.A35A,ENSG00000181029:ENST00000596148:exon2:c.G306A:p.A102A	NA	NA	19p13.2	Score=777;Name=V$PAX5_02	NA	NA	NA	rs1053363	0.22	0.22	0.227	0.243011	0.174	0.127	0.1326	0.4274	0.2628	0.18	0.14	0.13	0.46	0.1939	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.303537	1.303537	NA	0.164563	0.394569	NA	0.239	NA	6.1342036
1039	12	26811045	26811045	T	C	exonic	ITPR2	NA	synonymous SNV	ITPR2:NM_002223:exon17:c.A1905G:p.S635S	exonic	ENSG00000123104	NA	synonymous SNV	ENSG00000123104:ENST00000381340:exon17:c.A1905G:p.S635S	Score=505;Name=lod=150	NA	12p11.23	NA	NA	NA	NA	rs12313993	0.17	0.17	0.171	0.20607	0.1779	0.0139	0.1383	0.3918	0.2301	0.17	0.01	0.15	0.37	0.1832	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.134817	NA	NA	0.171569	0.364835	NA	0.283	NA	6.1339976
1039	15	23932467	23932467	G	A	upstream	NDN	NA	NA	NA	upstream	ENSG00000182636	NA	NA	NA	Score=355;Name=lod=37	NA	15q11.2	NA	Name=Nrf1,TAF1,E2F6_(H-50)	Name=56	NA	rs3743340	0.54	0.54	0.501	0.539936	0.5328	0.5744	0.5692	0.4773	0.5757	0.49	0.58	0.55	0.55	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.392508	2.392508	NA	NA	NA	NA	NA	NA	6.1338666
1039	2	15735648	15735648	T	C	exonic	DDX1	NA	synonymous SNV	DDX1:NM_004939:exon3:c.T103C:p.L35L	exonic	ENSG00000079785	NA	synonymous SNV	ENSG00000079785:ENST00000233084:exon3:c.T103C:p.L35L,ENSG00000079785:ENST00000381341:exon4:c.T103C:p.L35L	NA	NA	2p24.3	Score=922;Name=V$SOX9_B1	NA	NA	NA	rs2302929	0.2	0.2	0.192	0.17492	0.164	0.371	0.1354	0.0333	0.2035	0.17	0.38	0.15	0.04	0.1801	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.74307	NA	NA	0.188837	0.061734	NA	0.159	NA	6.1337296
1039	5	19591174	19591174	A	G	exonic	CDH18	NA	synonymous SNV	CDH18:NM_001167667:exon7:c.T991C:p.L331L,CDH18:NM_004934:exon7:c.T991C:p.L331L	exonic	ENSG00000145526	NA	synonymous SNV	ENSG00000145526:ENST00000515257:exon5:c.T829C:p.L277L,ENSG00000145526:ENST00000511273:exon6:c.T991C:p.L331L,ENSG00000145526:ENST00000274170:exon7:c.T991C:p.L331L,ENSG00000145526:ENST00000382275:exon7:c.T991C:p.L331L,ENSG00000145526:ENST00000502796:exon7:c.T991C:p.L331L,ENSG00000145526:ENST00000506372:exon7:c.T991C:p.L331L,ENSG00000145526:ENST00000507958:exon9:c.T991C:p.L331L	Score=533;Name=lod=196	NA	5p14.3	NA	NA	NA	NA	rs17285716	0.1	0.1	0.076	0.0958466	0.1799	0.004	0.1945	0.0151	0.1431	0.18	0.0017	0.18	0.02	0.1678	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.156918	NA	NA	0.185465	0.047208	ID=COSM1178259,COSM1178258;OCCURENCE=1(prostate)	0.101	NA	6.1335016
1039	10	99696003	99696003	G	A	exonic	CRTAC1	NA	synonymous SNV	CRTAC1:NM_001206528:exon3:c.C345T:p.I115I,CRTAC1:NM_018058:exon3:c.C345T:p.I115I	exonic	ENSG00000095713	NA	synonymous SNV	ENSG00000095713:ENST00000413387:exon1:c.C33T:p.I11I,ENSG00000095713:ENST00000309155:exon2:c.C321T:p.I107I,ENSG00000095713:ENST00000298819:exon3:c.C345T:p.I115I,ENSG00000095713:ENST00000370591:exon3:c.C345T:p.I115I,ENSG00000095713:ENST00000370597:exon3:c.C345T:p.I115I	Score=535;Name=lod=200	NA	10q24.2	NA	NA	NA	NA	rs35027739	0.1	0.1	0.092	0.107428	0.166	0.0208	0.0893	0.0613	0.2117	0.18	0.01	0.12	0.05	0.1688	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.883841	NA	NA	0.199186	0.077621	NA	0.058	NA	6.1326806
1039	1	22835677	22835677	A	G	exonic	ZBTB40	NA	nonsynonymous SNV	ZBTB40:NM_014870:exon9:c.A1784G:p.Y595C,ZBTB40:NM_001083621:exon10:c.A1784G:p.Y595C	exonic	ENSG00000184677	NA	nonsynonymous SNV	ENSG00000184677:ENST00000374651:exon7:c.A1448G:p.Y483C,ENSG00000184677:ENST00000375647:exon9:c.A1784G:p.Y595C,ENSG00000184677:ENST00000404138:exon10:c.A1784G:p.Y595C	NA	NA	1p36.12	NA	NA	Name=3	NA	rs209729	0.84	0.84	0.841	0.822484	0.7167	0.8929	0.8429	0.9395	0.6861	0.73	0.91	0.82	0.93	0.7648	0.93	0.24	T	0.0	B	0.0	B	0.668	N	1.000	P	-0.345	N	1.03	T	-1.050	T	0.000	T	0.039	1.07	9.371	0.925	-0.333	0.223	2.866	1.070475	NA	0.51	0.719186	0.903995	NA	0.746	NA	6.1326474
1039	22	42334953	42334953	C	G	UTR3	CENPM	NM_001110215:c.*107G>C,NM_024053:c.*107G>C,NM_001002876:c.*234G>C	NA	NA	UTR3	ENSG00000100162	ENST00000215980:c.*107G>C,ENST00000402338:c.*107G>C,ENST00000404067:c.*234G>C,ENST00000472374:c.*107G>C,ENST00000407253:c.*234G>C	NA	NA	NA	NA	22q13.2	NA	Name=EBF	Name=37	NA	rs1047997	0.27	0.27	0.268	0.29992	0.2008	0.124	0.4467	0.413	0.3262	0.2	0.14	0.42	0.41	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.037694	NA	NA	NA	NA	NA	0.312	NA	6.1325334
1039	7	149523195	149523195	C	G	exonic	SSPO	NA	nonsynonymous SNV	SSPO:NM_198455:exon101:c.C14278G:p.H4760D	ncRNA_exonic	ENSG00000197558	NA	NA	NA	NA	NA	7q36.1	Score=793;Name=V$HEN1_01	NA	NA	NA	rs78492471	0.07	0.07	0.076	0.0473243	0.1421	0.001	0.0764	0.0053	0.0337	0.15	NA	0.09	0.01	0.0906	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.424122	NA	0.13	0.135158	0.024682	ID=COSM1319001;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.145	NA	6.132142
1039	11	6231731	6231731	C	T	exonic	C11orf42	NA	nonsynonymous SNV	C11orf42:NM_173525:exon2:c.C724T:p.P242S	exonic	ENSG00000180878	NA	nonsynonymous SNV	ENSG00000180878:ENST00000316375:exon2:c.C724T:p.P242S	NA	NA	11p15.4	NA	NA	NA	NA	rs10769671	0.68	0.68	0.643	0.617212	0.7535	0.8135	0.719	0.3555	0.5562	0.74	0.78	0.78	0.38	0.7046	0.78	0.3	T	0.001	B	0.006	B	0.281	N	1.000	P	0.55	N	0.96	T	-1.020	T	0.000	T	0.018	-0.068	3.671	3.24	0.734	0.284	8.134	-0.067571	NA	0.35	0.743482	0.440482	NA	0.703	NA	6.1317514
1039	20	57244493	57244493	G	A	exonic	STX16	NA	synonymous SNV	STX16:NM_001134772:exon4:c.G528A:p.Q176Q,STX16:NM_003763:exon4:c.G477A:p.Q159Q,STX16:NM_001001433:exon5:c.G540A:p.Q180Q,STX16:NM_001134773:exon5:c.G489A:p.Q163Q,STX16:NM_001204868:exon6:c.G381A:p.Q127Q	exonic	ENSG00000124222,ENSG00000254995	NA	synonymous SNV	ENSG00000124222:ENST00000438253:exon3:c.G366A:p.Q122Q,ENSG00000124222:ENST00000358029:exon4:c.G528A:p.Q176Q,ENSG00000124222:ENST00000371132:exon4:c.G477A:p.Q159Q,ENSG00000124222:ENST00000312283:exon5:c.G381A:p.Q127Q,ENSG00000124222:ENST00000355957:exon5:c.G489A:p.Q163Q,ENSG00000124222:ENST00000361770:exon5:c.G489A:p.Q163Q,ENSG00000124222:ENST00000361830:exon5:c.G540A:p.Q180Q,ENSG00000124222:ENST00000371141:exon5:c.G540A:p.Q180Q,ENSG00000124222:ENST00000464640:exon5:c.G489A:p.Q163Q,ENSG00000254995:ENST00000530122:exon5:c.G540A:p.Q180Q,ENSG00000124222:ENST00000359617:exon6:c.G381A:p.Q127Q	Score=511;Name=lod=159	NA	20q13.32	NA	NA	Name=4	NA	rs2296524	0.48	0.48	0.488	0.474441	0.5	0.4147	0.4553	0.5008	0.4877	0.51	0.46	0.46	0.48	0.5021	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.346533	1.346533	NA	0.532952	0.484018	NA	0.529	NA	6.1316146
1039	13	50123688	50123688	G	T	exonic	RCBTB1	NA	synonymous SNV	RCBTB1:NM_018191:exon9:c.C951A:p.S317S	exonic	ENSG00000136144	NA	synonymous SNV	ENSG00000136144:ENST00000258646:exon7:c.C951A:p.S317S,ENSG00000136144:ENST00000378302:exon9:c.C951A:p.S317S,ENSG00000136144:ENST00000546015:exon9:c.C951A:p.S317S	NA	NA	13q14.2	NA	Name=CTCF_(SC-5916),CTCF,Rad21	NA	NA	rs3751382	0.26	0.26	0.262	0.312899	0.167	0.2788	0.1311	0.5023	0.3712	0.17	0.26	0.16	0.49	0.2215	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.228805	NA	NA	0.146744	0.451203	NA	0.42	NA	6.1314226
1039	1	200959302	200959302	G	A	exonic	KIF21B	NA	synonymous SNV	KIF21B:NM_001252100:exon20:c.C2994T:p.D998D,KIF21B:NM_001252102:exon20:c.C2994T:p.D998D,KIF21B:NM_001252103:exon20:c.C2994T:p.D998D,KIF21B:NM_017596:exon20:c.C2994T:p.D998D	exonic	ENSG00000116852	NA	synonymous SNV	ENSG00000116852:ENST00000332129:exon20:c.C2994T:p.D998D,ENSG00000116852:ENST00000360529:exon20:c.C2994T:p.D998D,ENSG00000116852:ENST00000422435:exon20:c.C2994T:p.D998D,ENSG00000116852:ENST00000461742:exon20:c.C2994T:p.D998D	Score=591;Name=lod=337	NA	1q32.1	NA	NA	NA	NA	rs2297911	0.26	0.26	0.262	0.263778	0.1541	0.2976	0.2032	0.4531	0.1288	0.16	0.32	0.17	0.41	0.2033	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.022903	NA	NA	0.178488	0.423059	NA	0.225	NA	6.1307786
1039	3	112727184	112727184	A	T	exonic	C3orf17	NA	nonsynonymous SNV	C3orf17:NM_015412:exon8:c.T1069A:p.F357I	exonic	ENSG00000163608	NA	nonsynonymous SNV	ENSG00000163608:ENST00000383675:exon6:c.T859A:p.F287I,ENSG00000163608:ENST00000393857:exon7:c.T661A:p.F221I,ENSG00000163608:ENST00000314400:exon8:c.T1069A:p.F357I	NA	NA	3q13.2	NA	NA	Name=24	NA	rs2306857	0.53	0.53	0.491	0.496206	0.7584	0.3512	0.7363	0.2065	0.5971	0.76	0.35	0.73	0.22	0.6698	0.77	0.38	T	0.419	B	0.261	B	0.009	N	0.873	P	1.52	L	1.49	T	-1.024	T	0.000	T	0.081	0.764	8.042	0.155	0.116	0.291	4.365	0.763993	NA	0.53	0.774767	0.298457	NA	0.543	NA	6.1303664
1039	11	8707083	8707083	G	A	ncRNA_exonic	SNORA45	NA	NA	NA	ncRNA_exonic	ENSG00000212607	NA	NA	NA	NA	NA	11p15.4	NA	Name=Pol2-4H8	Name=9	NA	rs2073686	0.19	0.19	0.16	0.183107	0.1779	0.2708	0.1715	0.0946	0.226	0.19	0.25	0.21	0.09	0.181	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.647228	NA	NA	0.177906	0.108124	NA	0.181	NA	6.1298606
1039	8	145741702	145741702	C	G	exonic	RECQL4	NA	nonsynonymous SNV	RECQL4:NM_004260:exon5:c.G801C:p.E267D	exonic	ENSG00000160957	NA	nonsynonymous SNV	ENSG00000160957:ENST00000428558:exon5:c.G801C:p.E267D	NA	NA	8q24.3	NA	NA	NA	NA	rs4244612	0.42	0.42	0.378	0.447684	0.3827	0.4821	0.464	0.4198	0.5051	0.39	0.43	0.49	0.41	0.4377	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.733567	NA	0.2	0.383245	0.410061	NA	0.362	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000080899.2;CLNDSDB=.;CLNDSDBID=.	6.1296884
1039	2	101010082	101010082	G	C	exonic	CHST10	NA	synonymous SNV	CHST10:NM_004854:exon7:c.C696G:p.T232T	exonic	ENSG00000115526	NA	synonymous SNV	ENSG00000115526:ENST00000264249:exon7:c.C696G:p.T232T,ENSG00000115526:ENST00000409701:exon7:c.C696G:p.T232T,ENSG00000115526:ENST00000542617:exon7:c.C840G:p.T280T	Score=568;Name=lod=272	NA	2q11.2	Score=723;Name=V$PAX4_04	NA	NA	NA	rs3748930	0.61	0.61	0.59	0.605831	0.499	0.8065	0.5778	0.6263	0.501	0.5	0.8	0.53	0.62	0.5427	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.961266	NA	NA	0.495349	0.626872	NA	0.572	NA	6.1296176
1039	1	85787334	85787334	C	T	intronic	DDAH1	NA	NA	NA	ncRNA_intronic	ENSG00000223653	NA	NA	NA	NA	NA	1p22.3	NA	Name=BATF	Name=91	NA	rs1498374	0.14	0.14	0.121	0.123802	0.2038	0.1567	0.1945	0.0189	0.0992	0.21	0.15	0.17	0.01	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.290077	NA	NA	NA	NA	NA	0.123	NA	6.1295333
1039	10	72358655	72358655	G	A	exonic	PRF1	NA	synonymous SNV	PRF1:NM_001083116:exon3:c.C822T:p.A274A,PRF1:NM_005041:exon3:c.C822T:p.A274A	exonic	ENSG00000180644	NA	synonymous SNV	ENSG00000180644:ENST00000373209:exon3:c.C822T:p.A274A,ENSG00000180644:ENST00000441259:exon3:c.C822T:p.A274A	NA	NA	10q22.1	NA	Name=HMGN3,GABP	NA	NA	rs885821	0.13	0.13	0.126	0.11262	0.1988	0.1101	0.1513	0.0537	0.0787	0.21	0.11	0.11	0.05	0.1582	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.930642	NA	NA	0.180814	0.083522	NA	0.08	NA	6.1288526
1039	10	12071397	12071397	G	A	exonic	UPF2	NA	synonymous SNV	UPF2:NM_015542:exon3:c.C492T:p.L164L,UPF2:NM_080599:exon3:c.C492T:p.L164L	exonic	ENSG00000151461	NA	synonymous SNV	ENSG00000151461:ENST00000356352:exon2:c.C492T:p.L164L,ENSG00000151461:ENST00000357604:exon3:c.C492T:p.L164L,ENSG00000151461:ENST00000397053:exon3:c.C492T:p.L164L	Score=695;Name=lod=893	NA	10p14	NA	NA	NA	NA	rs11257490	0.28	0.28	0.285	0.261781	0.161	0.4435	0.2507	0.2814	0.1595	0.16	0.47	0.22	0.28	0.2092	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.246138	NA	NA	0.167791	0.264639	NA	0.21	NA	6.1286756
1039	9	140638416	140638416	G	A	exonic	EHMT1	NA	synonymous SNV	EHMT1:NM_001145527:exon6:c.G1044A:p.S348S,EHMT1:NM_024757:exon6:c.G1044A:p.S348S	exonic	ENSG00000181090	NA	synonymous SNV	ENSG00000181090:ENST00000334856:exon6:c.G951A:p.S317S,ENSG00000181090:ENST00000460843:exon6:c.G1044A:p.S348S,ENSG00000181090:ENST00000462484:exon6:c.G1044A:p.S348S	NA	NA	9q34.3	NA	NA	NA	NA	rs1129767	0.15	0.15	0.116	0.152356	0.167	0.1012	0.3862	0.0068	0.2209	0.16	0.1	0.39	0.02	0.1925	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.155321	NA	NA	0.178721	0.038357	NA	0.116	CLINSIG=non-pathogenic|other;CLNDBN=Chromosome_9q_deletion_syndrome|not_specified;CLNREVSTAT=single|mult;CLNACC=RCV000055953.1|RCV000082212.3;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet|.;CLNDSDBID=NBK47079:C0795833:610253:ORPHA261494|.	6.1284456
1039	2	132200529	132200529	A	G	ncRNA_exonic	LOC401010	NA	NA	NA	ncRNA_exonic	ENSG00000217950	NA	NA	NA	Score=774;Name=lod=1864	NA	2q21.1	NA	NA	NA	NA	rs71345555	0.37	0.37	0.201	0.38758	0.2326	0.7589	0.5259	0.2035	0.3149	0.21	0.68	0.43	0.2	0.3058	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.713014	NA	NA	NA	NA	NA	0.13	CLINSIG=other;CLNDBN=Malignant_melanoma;CLNREVSTAT=not;CLNACC=RCV000065067.2;CLNDSDB=MedGen:SNOMED_CT;CLNDSDBID=C0025202:2092003	6.1282666
1039	7	100017454	100017454	G	A	exonic	ZCWPW1	NA	synonymous SNV	ZCWPW1:NM_001258008:exon4:c.C81T:p.Y27Y,ZCWPW1:NM_017984:exon4:c.C81T:p.Y27Y	exonic	ENSG00000078487	NA	synonymous SNV	ENSG00000078487:ENST00000360951:exon4:c.C81T:p.Y27Y,ENSG00000078487:ENST00000398027:exon4:c.C81T:p.Y27Y	NA	NA	7q22.1	NA	Name=EBF1_(C-8),EBF	NA	NA	rs7783159	0.1	0.1	0.081	0.0874601	0.1938	0.0278	0.1066	0.025	0.1104	0.19	0.02	0.1	0.03	0.1482	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.729017	NA	NA	0.196429	0.0586	NA	0.116	NA	6.1282376
1039	5	159344461	159344461	G	A	exonic	ADRA1B	NA	synonymous SNV	ADRA1B:NM_000679:exon1:c.G549A:p.G183G	exonic	ENSG00000170214	NA	synonymous SNV	ENSG00000170214:ENST00000306675:exon1:c.G549A:p.G183G	Score=566;Name=lod=265	NA	5q33.3	NA	NA	NA	NA	rs3729604	0.22	0.22	0.224	0.201877	0.1759	0.3482	0.1931	0.1679	0.1299	0.19	0.37	0.18	0.15	0.1858	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.090306	NA	NA	0.176977	0.159555	ID=COSM150006;OCCURENCE=1(stomach)	0.159	NA	6.1279896
1039	6	143091769	143091769	G	A	exonic	HIVEP2	NA	synonymous SNV	HIVEP2:NM_006734:exon5:c.C4107T:p.V1369V	exonic	ENSG00000010818	NA	synonymous SNV	ENSG00000010818:ENST00000012134:exon3:c.C4107T:p.V1369V,ENSG00000010818:ENST00000367604:exon4:c.C4107T:p.V1369V,ENSG00000010818:ENST00000367603:exon5:c.C4107T:p.V1369V	NA	NA	6q24.2	Score=894;Name=V$OCT1_05	NA	NA	NA	rs34947356	0.12	0.12	0.13	0.140375	0.1948	0.0794	0.1124	0.0991	0.2229	0.19	0.05	0.13	0.1	0.1597	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.327073	NA	NA	0.184385	0.098974	NA	0.087	NA	6.1277816
1039	10	5005549	5005549	G	C	UTR5	AKR1C1	NM_001353:c.-88G>C	NA	NA	UTR5	ENSG00000187134	ENST00000434459:c.-88G>C,ENST00000380872:c.-88G>C	NA	NA	NA	NA	10p15.1	NA	Name=Pol2,TAF1,NF-YB,Sin3Ak-20,Pol2(b),TBP,GTF2B,HEY1	Name=77	NA	rs7069696	0.16	0.16	0.091	0.145966	0.2058	0.2312	0.1326	0.0492	0.137	0.19	0.23	0.16	0.05	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.257426	NA	NA	NA	NA	ID=COSN163529;OCCURENCE=1(NS)	0.014	NA	6.1275334
1040	19	41220529	41220529	C	T	exonic	ADCK4	NA	synonymous SNV	ADCK4:NM_001142555:exon2:c.G9A:p.L3L,ADCK4:NM_024876:exon2:c.G9A:p.L3L	exonic	ENSG00000123815	NA	synonymous SNV	ENSG00000123815:ENST00000594490:exon1:c.G9A:p.L3L,ENSG00000123815:ENST00000601304:exon1:c.G9A:p.L3L,ENSG00000123815:ENST00000243583:exon2:c.G9A:p.L3L,ENSG00000123815:ENST00000324464:exon2:c.G9A:p.L3L,ENSG00000123815:ENST00000450541:exon2:c.G9A:p.L3L,ENSG00000123815:ENST00000593723:exon2:c.G9A:p.L3L,ENSG00000123815:ENST00000594084:exon2:c.G9A:p.L3L,ENSG00000123815:ENST00000594720:exon2:c.G9A:p.L3L,ENSG00000123815:ENST00000596357:exon2:c.G9A:p.L3L,ENSG00000123815:ENST00000599643:exon2:c.G9A:p.L3L,ENSG00000123815:ENST00000600707:exon2:c.G9A:p.L3L,ENSG00000123815:ENST00000601967:exon2:c.G9A:p.L3L	Score=355;Name=lod=37	NA	19q13.2	NA	NA	NA	NA	rs11673492	0.13	0.13	0.134	0.0992412	0.1978	0.003	0.0922	0.1324	0.0573	0.21	0.01	0.11	0.16	0.1513	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.632161	NA	NA	0.192827	0.129823	NA	0.145	NA	6.1247396
1040	16	14397924	14397924	T	C	downstream	MIR193B	NA	NA	NA	ncRNA_intronic	ENSG00000262454	NA	NA	NA	NA	NA	16p13.12	NA	Name=Pol2,EBF,Egr-1	Name=75	NA	rs112887255	0.01	0.01	0.006	0.00579073	0.0149	NA	0.013	0.003	0.001	0.01	NA	0.01	0.0041	0.0114	0.016	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.459844	1.459844	NA	0.016052	0.004783	NA	NA	NA	6.1243146
1040	1	160393905	160393905	A	G	exonic	VANGL2	NA	synonymous SNV	VANGL2:NM_020335:exon7:c.A1137G:p.K379K	exonic	ENSG00000162738	NA	synonymous SNV	ENSG00000162738:ENST00000368061:exon7:c.A1137G:p.K379K	Score=703;Name=lod=960	NA	1q23.2	Score=800;Name=V$OLF1_01	NA	NA	NA	rs12086448	0.54	0.54	0.533	0.576677	0.497	0.371	0.4524	0.8003	0.6564	0.5	0.41	0.48	0.79	0.5214	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.120571	NA	NA	0.525814	0.77054	ID=COSM146665;OCCURENCE=1(stomach)	0.565	NA	6.1224526
1040	17	10404046	10404046	G	A	exonic	MYH1	NA	synonymous SNV	MYH1:NM_005963:exon28:c.C3762T:p.R1254R	exonic	ENSG00000109061	NA	synonymous SNV	ENSG00000109061:ENST00000226207:exon28:c.C3762T:p.R1254R	Score=511;Name=lod=159	NA	17p13.1	NA	NA	NA	NA	rs17811250	0.11	0.11	0.087	0.0694888	0.2266	0.001	0.1009	0.0182	0.0256	0.23	NA	0.12	0.03	0.1319	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.441431	NA	NA	0.186047	0.038357	NA	0.087	NA	6.1221196
1040	7	44553238	44553238	A	G	exonic	NPC1L1	NA	synonymous SNV	NPC1L1:NM_001101648:exon19:c.T3807C:p.V1269V,NPC1L1:NM_013389:exon20:c.T3888C:p.V1296V	exonic	ENSG00000015520	NA	synonymous SNV	ENSG00000015520:ENST00000546276:exon18:c.T3669C:p.V1223V,ENSG00000015520:ENST00000381160:exon19:c.T3807C:p.V1269V,ENSG00000015520:ENST00000289547:exon20:c.T3888C:p.V1296V	Score=321;Name=lod=27	NA	7p13	NA	NA	NA	NA	rs217434	0.13	0.13	0.11	0.116414	0.1789	0.005	0.1153	0.1483	0.1247	0.17	0.01	0.14	0.19	0.1651	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.027835	NA	NA	0.201512	0.16818	NA	0.116	NA	6.1211546
1040	7	142499071	142499071	T	C	intergenic	PRSS3P2,EPHB6	dist=16672;dist=53721	NA	NA	exonic	ENSG00000211772	NA	unknown	UNKNOWN	NA	NA	7q34	Score=908;Name=V$MEIS1_01	Name=ZBTB7A_(SC-34508)	Name=7	NA	rs1042960	NA	NA	0.549	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5211	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.335018	NA	NA	0.524772	0.609086	NA	0.384	NA	6.1207947
1040	22	37499386	37499386	C	T	exonic	TMPRSS6	NA	synonymous SNV	TMPRSS6:NM_153609:exon2:c.G99A:p.P33P	exonic	ENSG00000187045	NA	synonymous SNV	ENSG00000187045:ENST00000423761:exon1:c.G72A:p.P24P,ENSG00000187045:ENST00000346753:exon2:c.G99A:p.P33P,ENSG00000187045:ENST00000381792:exon2:c.G72A:p.P24P,ENSG00000187045:ENST00000406725:exon2:c.G72A:p.P24P,ENSG00000187045:ENST00000406856:exon2:c.G72A:p.P24P,ENSG00000187045:ENST00000442782:exon2:c.G99A:p.P33P	Score=381;Name=lod=47	NA	22q12.3	NA	NA	NA	NA	rs11704654	0.16	0.16	0.172	0.151558	0.1879	0.131	0.1124	0.1528	0.1616	0.19	0.14	0.14	0.17	0.1639	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.514649	NA	NA	0.194302	0.148207	NA	0.225	NA	6.1205646
1040	12	93147907	93147907	A	T	exonic	PLEKHG7	NA	synonymous SNV	PLEKHG7:NM_001004330:exon6:c.A357T:p.P119P	exonic	ENSG00000187510	NA	synonymous SNV	ENSG00000187510:ENST00000344636:exon6:c.A357T:p.P119P	Score=478;Name=lod=117	NA	12q22	NA	Name=Max	NA	NA	rs9669519	0.65	0.65	0.633	0.652756	0.4861	0.8919	0.7017	0.5847	0.635	0.49	0.9	0.68	0.57	0.5704	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.418554	NA	NA	0.489651	0.557649	NA	0.507	NA	6.1205156
1040	6	143090734	143090734	T	C	exonic	HIVEP2	NA	synonymous SNV	HIVEP2:NM_006734:exon5:c.A5142G:p.G1714G	exonic	ENSG00000010818	NA	synonymous SNV	ENSG00000010818:ENST00000012134:exon3:c.A5142G:p.G1714G,ENSG00000010818:ENST00000367604:exon4:c.A5142G:p.G1714G,ENSG00000010818:ENST00000367603:exon5:c.A5142G:p.G1714G	Score=317;Name=lod=26	NA	6q24.2	NA	NA	NA	NA	rs34530989	0.12	0.12	0.123	0.140575	0.1968	0.0804	0.1124	0.0968	0.2239	0.19	0.05	0.13	0.09	0.161	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.083236	NA	NA	0.188395	0.100482	NA	0.08	NA	6.1204716
1040	11	62848445	62848445	A	G	exonic	SLC22A24	NA	synonymous SNV	SLC22A24:NM_001136506:exon9:c.T1545C:p.L515L	exonic	ENSG00000197658	NA	synonymous SNV	ENSG00000197658:ENST00000417740:exon9:c.T1545C:p.L515L	Score=317;Name=lod=26	NA	11q12.3	NA	Name=USF-1	NA	NA	rs11231340	0.46	0.46	0.457	0.44369	0.5109	0.4196	0.4914	0.3442	0.5	0.5	0.47	0.46	0.37	0.5037	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.170367	NA	NA	0.531741	0.354769	ID=COSM467168;OCCURENCE=1(kidney)	0.5	NA	6.1203256
1040	12	13155339	13155339	C	A	ncRNA_exonic	HTR7P1	NA	NA	NA	ncRNA_exonic	ENSG00000183935	NA	NA	NA	Score=686;Name=lod=817	NA	12p13.1	NA	Name=E2F6_(H-50)	NA	NA	rs3825272	0.35	0.35	0.304	0.333267	0.5467	0.2173	0.4337	0.0726	0.5143	0.56	0.22	0.45	0.09	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.264644	NA	NA	NA	NA	NA	0.29	NA	6.1199666
1040	15	23021238	23021238	C	T	exonic	NIPA2	NA	synonymous SNV	NIPA2:NM_001008892:exon2:c.G99A:p.K33K,NIPA2:NM_001008894:exon2:c.G99A:p.K33K,NIPA2:NM_001008860:exon3:c.G99A:p.K33K,NIPA2:NM_001184888:exon3:c.G99A:p.K33K,NIPA2:NM_030922:exon4:c.G99A:p.K33K,NIPA2:NM_001184889:exon6:c.G99A:p.K33K	exonic	ENSG00000140157	NA	synonymous SNV	ENSG00000140157:ENST00000398013:exon2:c.G99A:p.K33K,ENSG00000140157:ENST00000539711:exon2:c.G99A:p.K33K,ENSG00000140157:ENST00000359727:exon3:c.G99A:p.K33K,ENSG00000140157:ENST00000398014:exon3:c.G99A:p.K33K,ENSG00000140157:ENST00000560039:exon3:c.G99A:p.K33K,ENSG00000140157:ENST00000337451:exon4:c.G99A:p.K33K	Score=689;Name=lod=845	NA	15q11.2	NA	NA	NA	NA	rs7170838	0.23	0.23	0.165	0.225639	0.1799	0.2421	0.3112	0.2262	0.1943	0.17	0.26	0.28	0.23	0.2074	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.012833	NA	NA	0.159535	0.220835	ID=COSM1179596;OCCURENCE=1(prostate)	0.167	NA	6.1198316
1040	11	102573569	102573569	C	A	exonic	MMP27	NA	synonymous SNV	MMP27:NM_022122:exon4:c.G534T:p.V178V	exonic	ENSG00000137675	NA	synonymous SNV	ENSG00000137675:ENST00000260229:exon4:c.G534T:p.V178V	Score=355;Name=lod=37	NA	11q22.2	NA	NA	NA	NA	rs3809018	0.12	0.12	0.123	0.108227	0.1789	0.1081	0.1859	0.0076	0.1166	0.2	0.1	0.15	0.01	0.1698	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.674903	NA	NA	0.198186	0.039265	NA	0.029	NA	6.1197806
1040	16	1574863	1574863	G	A	exonic	IFT140	NA	synonymous SNV	IFT140:NM_014714:exon23:c.C2919T:p.A973A	exonic	ENSG00000187535	NA	synonymous SNV	ENSG00000187535:ENST00000361339:exon5:c.C501T:p.A167A,ENSG00000187535:ENST00000426508:exon23:c.C2919T:p.A973A	NA	NA	16p13.3	NA	NA	NA	NA	rs2235640	0.21	0.21	0.231	0.23103	0.171	0.3214	0.1268	0.239	0.2628	0.18	0.3	0.13	0.24	0.1985	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.688472	NA	NA	0.177791	0.208276	NA	0.225	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117259.2;CLNDSDB=.;CLNDSDBID=.	6.1193756
1040	8	67369355	67369355	G	C	exonic	ADHFE1	NA	synonymous SNV	ADHFE1:NM_144650:exon12:c.G1116C:p.T372T	exonic	ENSG00000147576	NA	synonymous SNV	ENSG00000147576:ENST00000396623:exon12:c.G1116C:p.T372T,ENSG00000147576:ENST00000415254:exon13:c.G972C:p.T324T	NA	NA	8q13.1	Score=886;Name=V$TAL1BETAE47_01	NA	NA	NA	rs2555588	0.14	0.14	0.166	0.136182	0.2078	NA	0.1542	0.2141	0.0849	0.2	NA	0.16	0.23	0.1585	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.554241	NA	NA	0.181628	0.227644	NA	0.159	NA	6.1187386
1040	12	5603935	5603935	C	T	exonic	NTF3	NA	synonymous SNV	NTF3:NM_002527:exon1:c.C555T:p.P185P,NTF3:NM_001102654:exon2:c.C594T:p.P198P	exonic	ENSG00000185652	NA	synonymous SNV	ENSG00000185652:ENST00000331010:exon1:c.C555T:p.P185P,ENSG00000185652:ENST00000423158:exon2:c.C594T:p.P198P	Score=493;Name=lod=134	NA	12p13.31	NA	NA	NA	NA	rs10849277	0.1	0.1	0.101	0.106629	0.2048	0.0228	0.0937	0.0257	0.2106	0.2	0.02	0.12	0.02	0.1542	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.792539	NA	NA	0.188953	0.058783	NA	0.232	NA	6.1187136
1040	5	153783753	153783753	C	T	exonic	GALNT10	NA	synonymous SNV	GALNT10:NM_198321:exon8:c.C1146T:p.A382A	exonic	ENSG00000164574	NA	synonymous SNV	ENSG00000164574:ENST00000377657:exon1:c.C159T:p.A53A,ENSG00000164574:ENST00000377661:exon7:c.C960T:p.A320A,ENSG00000164574:ENST00000297107:exon8:c.C1146T:p.A382A	NA	NA	5q33.2	Score=897;Name=V$AP1_01	NA	NA	NA	rs6580076	0.24	0.24	0.256	0.285343	0.1571	0.1637	0.1585	0.5083	0.3313	0.15	0.17	0.18	0.5	0.2203	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.0188	NA	NA	0.171047	0.439174	ID=COSM150004;OCCURENCE=1(stomach)	0.21	NA	6.1182196
1040	17	66364749	66364749	T	C	exonic	ARSG	NA	synonymous SNV	ARSG:NM_001267727:exon7:c.T765C:p.P255P,ARSG:NM_014960:exon7:c.T765C:p.P255P	exonic	ENSG00000141337	NA	synonymous SNV	ENSG00000141337:ENST00000452479:exon6:c.T273C:p.P91P,ENSG00000141337:ENST00000448504:exon7:c.T765C:p.P255P	NA	NA	17q24.2	NA	Name=AP-2alpha,AP-2gamma	Name=5	NA	rs1558877	0.48	0.48	0.435	0.511382	0.506	0.2708	0.6167	0.6581	0.4918	0.5	0.29	0.58	0.6	0.5229	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.272183	NA	NA	0.520698	0.637767	NA	0.565	NA	6.1170686
1040	3	183900729	183900729	T	C	intronic	AP2M1	NA	NA	NA	exonic	ENSG00000161203	NA	nonsynonymous SNV	ENSG00000161203:ENST00000442686:exon3:c.T316C:p.C106R	NA	NA	3q27.1	NA	NA	NA	NA	rs843365	0.51	0.51	0.473	0.528754	0.4771	0.6012	0.4481	0.5136	0.5849	0.45	0.62	0.45	0.51	0.5726	0.62	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.942	T	0.000	T	0.038	-1.159	0.096	-2.47	-0.936	-0.008	4.705	-1.158879	NA	0.9	NA	NA	NA	0.428	NA	6.1169667
1040	6	158497717	158497717	T	C	exonic	SYNJ2	NA	synonymous SNV	SYNJ2:NM_001178088:exon16:c.T1641C:p.V547V,SYNJ2:NM_003898:exon17:c.T2352C:p.V784V	exonic	ENSG00000078269	NA	synonymous SNV	ENSG00000078269:ENST00000355585:exon17:c.T2352C:p.V784V,ENSG00000078269:ENST00000367121:exon17:c.T2352C:p.V784V,ENSG00000078269:ENST00000367122:exon17:c.T2352C:p.V784V	Score=366;Name=lod=41	NA	6q25.3	Score=872;Name=V$ATF6_01	NA	NA	NA	rs2296508	0.57	0.57	0.586	0.578275	0.5139	0.5883	0.3545	0.7587	0.5491	0.53	0.55	0.4	0.8	0.5215	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.554579	NA	NA	0.514767	0.704494	NA	0.587	NA	6.1164996
1040	8	19677915	19677915	G	A	exonic	INTS10	NA	synonymous SNV	INTS10:NM_018142:exon4:c.G327A:p.R109R	exonic	ENSG00000104613	NA	synonymous SNV	ENSG00000104613:ENST00000397977:exon4:c.G327A:p.R109R	NA	NA	8p21.3	NA	Name=MafK_(SC-477),MafF_(M8194)	NA	NA	rs7822495	0.24	0.24	0.244	0.24381	0.169	0.2927	0.2781	0.2784	0.1994	0.17	0.28	0.27	0.27	0.2033	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.302404	1.302404	NA	0.178659	0.261918	NA	0.188	NA	6.1157076
1040	19	8376431	8376431	G	A	exonic	NDUFA7	NA	synonymous SNV	NDUFA7:NM_005001:exon4:c.C300T:p.P100P	exonic	ENSG00000167774,ENSG00000267855	NA	synonymous SNV	ENSG00000267855:ENST00000601101:exon3:c.C150T:p.P50P,ENSG00000267855:ENST00000301457:exon4:c.C300T:p.P100P,ENSG00000267855:ENST00000593729:exon4:c.C300T:p.P100P,ENSG00000167774:ENST00000598884:exon4:c.C300T:p.P100P	NA	NA	19p13.2	NA	NA	Name=4	NA	rs561	0.17	0.17	0.142	0.138179	0.1859	0.2083	0.2666	0.0303	0.0716	0.19	0.2	0.27	0.04	0.175	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.156721	NA	NA	0.190112	0.055447	NA	0.203	NA	6.1156546
1040	6	74190448	74190448	T	C	exonic	MTO1	NA	synonymous SNV	MTO1:NM_001123226:exon7:c.T1180C:p.L394L,MTO1:NM_012123:exon7:c.T1180C:p.L394L,MTO1:NM_133645:exon8:c.T1255C:p.L419L	exonic	ENSG00000135297	NA	synonymous SNV	ENSG00000135297:ENST00000445187:exon2:c.T178C:p.L60L,ENSG00000135297:ENST00000415954:exon7:c.T1180C:p.L394L,ENSG00000135297:ENST00000498286:exon7:c.T1180C:p.L394L,ENSG00000135297:ENST00000370300:exon8:c.T1255C:p.L419L,ENSG00000135297:ENST00000370305:exon8:c.T1033C:p.L345L	Score=576;Name=lod=291	NA	6q13	NA	NA	NA	NA	rs2036039	0.2	0.2	0.192	0.208067	0.1849	0.2123	0.1758	0.2693	0.1677	0.19	0.2	0.15	0.25	0.1871	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.202747	NA	NA	0.179186	0.258965	ID=COSM150124;OCCURENCE=1(stomach)	0.152	NA	6.1154806
1040	1	206327510	206327510	T	C	exonic	CTSE	NA	synonymous SNV	CTSE:NM_001910:exon6:c.T699C:p.F233F,CTSE:NM_148964:exon6:c.T699C:p.F233F	exonic	ENSG00000196188	NA	synonymous SNV	ENSG00000196188:ENST00000432969:exon5:c.T474C:p.F158F,ENSG00000196188:ENST00000358184:exon6:c.T699C:p.F233F,ENSG00000196188:ENST00000360218:exon6:c.T699C:p.F233F,ENSG00000196188:ENST00000361052:exon6:c.T714C:p.F238F	Score=439;Name=lod=81	NA	1q32.1	NA	NA	NA	NA	rs61742539	0.19	0.19	0.174	0.175519	0.2038	0.0169	0.1628	0.3744	0.0501	0.2	0.01	0.2	0.4	0.1653	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.021449	NA	NA	0.182326	0.367	NA	0.261	NA	6.1152406
1040	14	74206658	74206658	G	A	exonic	ELMSAN1	NA	synonymous SNV	ELMSAN1:NM_001043318:exon2:c.C54T:p.F18F,ELMSAN1:NM_194278:exon2:c.C54T:p.F18F	exonic	ENSG00000156030	NA	synonymous SNV	ENSG00000156030:ENST00000423556:exon1:c.C54T:p.F18F,ENSG00000156030:ENST00000286523:exon2:c.C54T:p.F18F,ENSG00000156030:ENST00000394071:exon2:c.C54T:p.F18F,ENSG00000156030:ENST00000421708:exon2:c.C54T:p.F18F,ENSG00000156030:ENST00000435371:exon2:c.C54T:p.F18F	Score=562;Name=lod=256	NA	14q24.3	NA	NA	NA	NA	rs758773	0.14	0.14	0.123	0.152955	0.1839	0.1419	0.1182	0.0507	0.2955	0.18	0.15	0.13	0.06	0.174	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.176427	NA	NA	0.193605	0.064911	NA	0.101	NA	6.1151616
1041	3	44612050	44612050	C	T	exonic	ZKSCAN7	NA	nonsynonymous SNV	ZKSCAN7:NM_018651:exon6:c.C1448T:p.T483I	exonic	ENSG00000196345	NA	nonsynonymous SNV	ENSG00000196345:ENST00000447279:exon5:c.C995T:p.T332I,ENSG00000196345:ENST00000273320:exon6:c.C1448T:p.T483I,ENSG00000196345:ENST00000426540:exon6:c.C1448T:p.T483I	NA	NA	3p21.31	NA	NA	NA	NA	rs9873604	0.76	0.76	0.742	0.752196	0.7545	0.8343	0.7305	0.6694	0.7924	0.73	0.86	0.74	0.69	0.7433	0.86	1	T	0.0	B	0.001	B	0.113	N	1.000	P	0.755	N	3.17	T	-0.976	T	0.000	T	0.018	-2.273	0.004	-1.03	-0.736	-2.303	5.453	-2.273462	NA	1	0.720698	0.672946	NA	0.63	NA	6.1148354
1041	3	183660585	183660585	G	A	exonic	ABCC5	NA	synonymous SNV	ABCC5:NM_005688:exon25:c.C3624T:p.L1208L	exonic	ENSG00000114770	NA	synonymous SNV	ENSG00000114770:ENST00000265586:exon23:c.C3495T:p.L1165L,ENSG00000114770:ENST00000334444:exon25:c.C3624T:p.L1208L	Score=655;Name=lod=613	NA	3q27.1	NA	NA	NA	NA	rs3749442	0.25	0.25	0.23	0.249002	0.1769	0.4365	0.2709	0.1944	0.1881	0.18	0.41	0.2	0.21	0.201	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.010328	NA	NA	0.174187	0.163556	NA	0.174	NA	6.1145796
1041	17	4608458	4608458	G	A	upstream	PELP1	NA	NA	NA	ncRNA_exonic	ENSG00000213939	NA	NA	NA	Score=715;Name=lod=1070	NA	17p13.2	NA	Name=Pol2	NA	NA	rs9895782	0.04	0.04	0.022	0.038139	0.0527	NA	0.0677	0.028	0.0552	0.05	NA	0.07	0.04	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.029498	NA	NA	NA	NA	NA	0.014	NA	6.1139666
1041	16	70016416	70016416	T	A	ncRNA_intronic	PDXDC2P	NA	NA	NA	exonic	ENSG00000226232	NA	stopgain	ENSG00000226232:ENST00000532298:exon4:c.A382T:p.R128X	NA	NA	16q22.1	NA	NA	NA	NA	rs3748385	0.23	0.23	0.174	0.184904	0.4046	0.0833	0.3242	0.0204	0.1871	0.41	0.1	0.33	0.02	0.3157	0.41	0	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	1.329	10.36	-1.32	-0.323	0.033	.	1.328875	1.328875	NA	NA	NA	NA	NA	NA	6.1130333
1041	7	142510350	142510350	G	A	intergenic	PRSS3P2,EPHB6	dist=27951;dist=42442	NA	NA	exonic	ENSG00000237254	NA	nonsynonymous SNV	ENSG00000237254:ENST00000417977:exon2:c.C256T:p.P86S	NA	NA	7q34	NA	Name=GATA-1,Pol2	Name=20	NA	rs17268	0.17	0.17	0.147	0.14357	0.2624	0.1121	0.2176	0.0469	0.1319	0.27	0.11	0.23	0.04	0.2216	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.366516	NA	0.03	0.236449	0.069939	NA	0.123	NA	6.1128844
1041	1	20827216	20827216	C	T	exonic	MUL1	NA	synonymous SNV	MUL1:NM_024544:exon4:c.G1026A:p.A342A	exonic	ENSG00000090432	NA	synonymous SNV	ENSG00000090432:ENST00000264198:exon4:c.G1026A:p.A342A	Score=525;Name=lod=181	NA	1p36.12	NA	NA	NA	NA	rs595980	0.1	0.1	0.096	0.0712859	0.1988	0.001	0.1023	0.0272	0.0501	0.19	0.0035	0.13	0.03	0.1515	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.957375	NA	NA	0.203488	0.06355	NA	0.13	NA	6.1128786
1041	9	140006202	140006202	G	A	exonic	DPP7	NA	synonymous SNV	DPP7:NM_013379:exon11:c.C1212T:p.L404L	exonic	ENSG00000176978	NA	stopgain	ENSG00000176978:ENST00000470766:exon2:c.C109T:p.Q37X	Score=333;Name=lod=30	NA	9q34.3	NA	NA	NA	NA	rs13631	0.51	0.51	0.476	0.514776	0.3946	0.6776	0.4971	0.5325	0.4591	0.39	0.69	0.5	0.51	0.4427	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.081689	NA	NA	0.383953	0.517022	NA	0.457	NA	6.1120803
1041	21	46077946	46077946	A	G	exonic	KRTAP12-3	NA	nonsynonymous SNV	KRTAP12-3:NM_198697:exon1:c.A50G:p.H17R	exonic	ENSG00000205439	NA	nonsynonymous SNV	ENSG00000205439:ENST00000397907:exon1:c.A50G:p.H17R	NA	NA	21q22.3	NA	NA	NA	NA	rs9306111	0.77	0.77	0.764	0.789537	0.7624	0.6637	0.7507	0.9198	0.7986	0.77	0.64	0.77	0.92	0.7466	0.92	0.06	T	0.0	B	0.0	B	.	.	0.921	P	.	.	5.03	T	-1.071	T	0.000	T	0.03	0.156	4.837	3.03	0.116	-0.359	3.338	0.155633	NA	0.09	0.712462	0.890367	NA	0.674	NA	6.1118714
1041	13	45563464	45563464	G	C	exonic	NUFIP1	NA	nonsynonymous SNV	NUFIP1:NM_012345:exon1:c.C108G:p.S36R	exonic	ENSG00000083635	NA	nonsynonymous SNV	ENSG00000083635:ENST00000379161:exon1:c.C108G:p.S36R	NA	NA	13q14.12	NA	Name=Max,Oct-2,EBF1_(C-8),CTCF,TAF1,ETS1,POU2F2,Pol2(phosphoS2),Pol2,E2F6,TAF7_(SQ-8),HEY1,NFKB,c-Myc,TBP,Pol2-4H8,HA-E2F1	NA	NA	rs1140993	0.55	0.55	0.526	0.51258	0.7744	0.5575	0.6441	0.1286	0.6227	0.77	0.58	0.63	0.12	0.6807	0.77	0.11	T	0.148	B	0.038	B	0.858	N	1.000	P	0.345	N	0.95	T	-1.001	T	0.000	T	0.056	1.401	10.62	1.29	0.253	0.105	5.711	1.400964	1.400964	0.02	0.766667	0.227542	NA	0.457	NA	6.1115664
1041	15	34015013	34015013	G	A	exonic	RYR3	NA	synonymous SNV	RYR3:NM_001036:exon44:c.G6717A:p.G2239G,RYR3:NM_001243996:exon44:c.G6717A:p.G2239G	exonic	ENSG00000198838	NA	synonymous SNV	ENSG00000198838:ENST00000389232:exon44:c.G6717A:p.G2239G,ENSG00000198838:ENST00000415757:exon44:c.G6717A:p.G2239G	Score=393;Name=lod=53	NA	15q14	NA	NA	NA	NA	rs2293027	0.16	0.16	0.159	0.161142	0.1859	0.2351	0.0965	0.0772	0.2188	0.19	0.22	0.1	0.09	0.1851	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.629424	NA	NA	0.184528	0.086198	NA	0.094	NA	6.1111386
1041	5	5239921	5239921	C	T	exonic	ADAMTS16	NA	synonymous SNV	ADAMTS16:NM_139056:exon16:c.C2406T:p.T802T	exonic	ENSG00000145536	NA	synonymous SNV	ENSG00000145536:ENST00000274181:exon16:c.C2406T:p.T802T	NA	NA	5p15.32	Score=763;Name=V$PAX6_01	NA	NA	NA	rs11742341	0.1	0.1	0.099	0.114617	0.1928	0.0764	0.111	0.0061	0.2229	0.18	0.08	0.1	0.01	0.1675	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.061267	NA	NA	0.19579	0.033475	NA	0.188	NA	6.1105766
1041	3	13896284	13896284	C	T	exonic	WNT7A	NA	synonymous SNV	WNT7A:NM_004625:exon3:c.G315A:p.A105A	exonic	ENSG00000154764	NA	synonymous SNV	ENSG00000154764:ENST00000285018:exon3:c.G315A:p.A105A	Score=485;Name=lod=125	NA	3p25.1	NA	NA	NA	NA	rs12639607	0.24	0.24	0.212	0.221446	0.17	0.5813	0.1916	0.0257	0.1892	0.18	0.55	0.15	0.04	0.2051	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.408192	NA	NA	0.181744	0.06128	ID=COSM445693;OCCURENCE=1(breast)	0.246	NA	6.1098226
1041	7	76112060	76112060	C	T	exonic	DTX2	NA	synonymous SNV	DTX2:NM_001102596:exon2:c.C504T:p.F168F,DTX2:NM_001102595:exon3:c.C504T:p.F168F,DTX2:NM_001102594:exon4:c.C504T:p.F168F,DTX2:NM_020892:exon5:c.C504T:p.F168F	exonic	ENSG00000091073	NA	synonymous SNV	ENSG00000091073:ENST00000446820:exon2:c.C504T:p.F168F,ENSG00000091073:ENST00000413936:exon3:c.C504T:p.F168F,ENSG00000091073:ENST00000446600:exon3:c.C231T:p.F77F,ENSG00000091073:ENST00000430490:exon4:c.C504T:p.F168F,ENSG00000091073:ENST00000307569:exon5:c.C504T:p.F168F,ENSG00000091073:ENST00000324432:exon5:c.C504T:p.F168F	Score=445;Name=lod=86	NA	7q11.23	Score=733;Name=V$LUN1_01	NA	NA	NA	rs1638074	0.56	0.56	0.575	0.589657	0.507	0.5526	0.5893	0.6369	0.6493	0.5	0.54	0.56	0.67	0.5448	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.259761	NA	NA	0.505349	0.630731	NA	0.319	NA	6.1095176
1041	14	70634546	70634546	C	T	exonic	SLC8A3	NA	synonymous SNV	SLC8A3:NM_033262:exon2:c.G594A:p.K198K,SLC8A3:NM_058240:exon2:c.G594A:p.K198K,SLC8A3:NM_182932:exon2:c.G594A:p.K198K,SLC8A3:NM_183002:exon2:c.G594A:p.K198K	exonic	ENSG00000100678	NA	synonymous SNV	ENSG00000100678:ENST00000528359:exon1:c.G594A:p.K198K,ENSG00000100678:ENST00000534137:exon1:c.G594A:p.K198K,ENSG00000100678:ENST00000356921:exon2:c.G594A:p.K198K,ENSG00000100678:ENST00000357887:exon2:c.G594A:p.K198K,ENSG00000100678:ENST00000381269:exon2:c.G594A:p.K198K,ENSG00000100678:ENST00000494208:exon2:c.G594A:p.K198K	Score=467;Name=lod=105	NA	14q24.2	NA	NA	NA	NA	rs7161524	0.14	0.14	0.152	0.142372	0.2068	0.0089	0.1124	0.202	0.1544	0.2	0.01	0.12	0.21	0.1652	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.232546	NA	NA	0.185349	0.188379	NA	0.275	NA	6.1093176
1041	5	148989122	148989122	C	T	exonic	ARHGEF37	NA	synonymous SNV	ARHGEF37:NM_001001669:exon4:c.C322T:p.L108L	exonic	ENSG00000183111	NA	synonymous SNV	ENSG00000183111:ENST00000333677:exon4:c.C322T:p.L108L	Score=462;Name=lod=101	NA	5q32	Score=906;Name=V$STAT5B_01	NA	NA	NA	rs2400891	0.41	0.41	0.403	0.377196	0.5507	0.3641	0.3343	0.2799	0.3742	0.55	0.37	0.36	0.3	0.4655	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.609517	NA	NA	0.541181	0.304908	ID=COSM149983;OCCURENCE=1(stomach)	0.5	NA	6.1092856
1041	17	37213317	37213317	C	A	ncRNA_exonic	LOC100131347	NA	NA	NA	ncRNA_exonic	ENSG00000263818	NA	NA	NA	NA	NA	17q12	NA	Name=POU2F2,HMGN3,E2F6_(H-50),TAF1,YY1_(C-20),E2F6,Mxi1_(bHLH),PU.1,Pol2,Oct-2,Pol2-4H8,ZNF263,Egr-1,SRF,HEY1,TBP,Nrf1	Name=147	NA	rs4795338	0.52	0.52	0.477	0.551518	0.5577	0.503	0.6772	0.444	0.6513	0.55	0.46	0.62	0.45	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.259416	NA	0.88	NA	NA	NA	0.449	NA	6.1089666
1041	17	8076667	8076667	T	G	UTR3	TMEM107	NM_183065:c.*854A>C,NM_032354:c.*854A>C	NA	NA	UTR3	ENSG00000179029	ENST00000449985:c.*903A>C	NA	NA	NA	NA	17p13.1	NA	Name=GATA2_(CG2-96),p300_(N-15),USF-1,MafK_(ab50322),SIX5,BCL3,eGFP-GATA2,HEY1,NFKB,c-Jun,Sin3Ak-20,Pol2-4H8,KAP1,ZNF263,RFX5_(N-494),STAT3,FOXA1_(C-20),Pol2(b),JunD,SIRT6,CHD2_(N-1250),BATF,CEBPB,CTCF,Oct-2,Max,FOXA1_(SC-101058),TAF7_(SQ-8),BCLAF1_(M33-P5B11),BCL11A,YY1_(C-20),BRCA1_(C-1863),TR4,GATA3_(SC-268),MEF2A,Mxi1_(bHLH),SP1,Pol2,POU2F2,HMGN3,MafF_(M8194),ETS1,GATA-1,TAF1,p300_(F-4),MafK_(SC-477)	Name=147	NA	rs79224651	0.12	0.12	0.125	0.0996406	0.2247	0.0308	0.1225	0.0469	0.0971	0.23	0.03	0.15	0.05	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.851423	NA	NA	NA	NA	NA	0.08	NA	6.1086334
1041	9	97365720	97365720	T	C	exonic	FBP1	NA	synonymous SNV	FBP1:NM_000507:exon7:c.A960G:p.G320G,FBP1:NM_001127628:exon8:c.A960G:p.G320G	exonic	ENSG00000165140	NA	synonymous SNV	ENSG00000165140:ENST00000375326:exon7:c.A960G:p.G320G,ENSG00000165140:ENST00000415431:exon8:c.A960G:p.G320G	Score=417;Name=lod=66	NA	9q22.32	NA	Name=eGFP-JunD,YY1_(C-20),SMC3_(ab9263),RXRA,CTCF,Rad21,YY1,CTCF_(SC-5916),CTCF_(C-20),c-Myc	Name=141	NA	rs1769257	0.92	0.92	0.929	0.907149	0.8489	0.9563	0.9222	0.9826	0.8037	0.85	0.95	0.91	0.99	0.8637	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.511828	NA	NA	0.845465	0.963005	NA	0.957	NA	6.1086016
1041	22	31679110	31679110	G	C	exonic	PIK3IP1	NA	nonsynonymous SNV	PIK3IP1:NM_052880:exon6:c.C752G:p.T251S	exonic	ENSG00000100100	NA	nonsynonymous SNV	ENSG00000100100:ENST00000487265:exon4:c.C515G:p.T172S,ENSG00000100100:ENST00000215912:exon6:c.C752G:p.T251S	NA	NA	22q12.2	Score=886;Name=V$SPZ1_01	NA	NA	NA	rs2040533	0.82	0.82	0.847	0.845048	0.7266	0.876	0.7478	0.9856	0.8139	0.71	0.87	0.76	0.98	0.7734	0.98	1	T	0.0	B	0.0	B	0.060	N	0.997	P	-1.7	N	0.98	T	-0.984	T	0.000	T	0.018	-2.192	0.005	1.32	0.357	0.236	2.227	-2.192325	NA	1	0.724767	0.945075	NA	0.833	NA	6.1085664
1041	20	43252915	43252915	T	C	exonic	ADA	NA	synonymous SNV	ADA:NM_000022:exon6:c.A534G:p.V178V	exonic	ENSG00000196839	NA	synonymous SNV	ENSG00000196839:ENST00000372874:exon6:c.A534G:p.V178V,ENSG00000196839:ENST00000536532:exon6:c.A534G:p.V178V,ENSG00000196839:ENST00000537820:exon6:c.A534G:p.V178V	Score=431;Name=lod=75	NA	20q13.12	NA	NA	NA	NA	rs244076	0.22	0.22	0.231	0.265775	0.1829	0.1548	0.1585	0.4735	0.2607	0.17	0.11	0.16	0.47	0.2057	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.326341	1.326341	NA	0.170116	0.401725	NA	0.225	NA	6.1079506
1041	4	155490832	155490832	C	T	exonic	FGB	NA	synonymous SNV	FGB:NM_001184741:exon7:c.C948T:p.Y316Y,FGB:NM_005141:exon7:c.C1125T:p.Y375Y	exonic	ENSG00000171564	NA	synonymous SNV	ENSG00000171564:ENST00000509493:exon5:c.C468T:p.Y156Y,ENSG00000171564:ENST00000302068:exon7:c.C1125T:p.Y375Y	NA	NA	4q31.3	NA	NA	Name=2	NA	rs4681	0.16	0.16	0.121	0.13778	0.1998	0.2242	0.1455	0.0189	0.1401	0.21	0.18	0.19	0.02	0.1692	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.549912	NA	NA	0.189884	0.049705	NA	0.138	NA	6.1077826
1041	14	74205878	74205878	C	T	exonic	ELMSAN1	NA	synonymous SNV	ELMSAN1:NM_001043318:exon2:c.G834A:p.P278P,ELMSAN1:NM_194278:exon2:c.G834A:p.P278P	exonic	ENSG00000156030	NA	synonymous SNV	ENSG00000156030:ENST00000423556:exon1:c.G834A:p.P278P,ENSG00000156030:ENST00000451078:exon1:c.G300A:p.P100P,ENSG00000156030:ENST00000286523:exon2:c.G834A:p.P278P,ENSG00000156030:ENST00000394071:exon2:c.G834A:p.P278P,ENSG00000156030:ENST00000435371:exon2:c.G834A:p.P278P	Score=553;Name=lod=235	NA	14q24.3	NA	NA	NA	NA	rs17782128	0.14	0.14	0.14	0.151757	0.1839	0.1409	0.1182	0.0469	0.2955	0.18	0.14	0.13	0.06	0.1813	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.590842	NA	NA	0.193721	0.062415	NA	0.101	NA	6.1077456
1041	10	26357747	26357747	C	T	exonic	MYO3A	NA	synonymous SNV	MYO3A:NM_017433:exon12:c.C1104T:p.Y368Y	exonic	ENSG00000095777	NA	synonymous SNV	ENSG00000095777:ENST00000543632:exon11:c.C1104T:p.Y368Y,ENSG00000095777:ENST00000265944:exon12:c.C1104T:p.Y368Y	Score=580;Name=lod=304	NA	10p12.1	NA	NA	NA	NA	rs35379457	0.31	0.31	0.324	0.396565	0.5616	0.2956	0.3516	0.3124	0.4765	0.44	0.25	0.3	0.2	0.4834	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.766498	NA	NA	0.514419	0.335679	ID=COSM1559312;OCCURENCE=3(central_nervous_system)	NA	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000039023.1;CLNDSDB=.;CLNDSDBID=.	6.1072476
1041	9	35043291	35043291	G	T	exonic	C9orf131	NA	nonsynonymous SNV	C9orf131:NM_001040410:exon2:c.G560T:p.W187L,C9orf131:NM_001040411:exon2:c.G446T:p.W149L,C9orf131:NM_203299:exon2:c.G665T:p.W222L,C9orf131:NM_001040412:exon3:c.G521T:p.W174L	exonic	ENSG00000174038	NA	nonsynonymous SNV	ENSG00000174038:ENST00000312292:exon2:c.G665T:p.W222L,ENSG00000174038:ENST00000354479:exon2:c.G446T:p.W149L,ENSG00000174038:ENST00000378745:exon2:c.G560T:p.W187L,ENSG00000174038:ENST00000421362:exon3:c.G521T:p.W174L	NA	NA	9p13.3	NA	NA	NA	NA	rs615474	0.66	0.66	0.649	0.653954	0.7495	0.4484	0.8127	0.5991	0.729	0.75	0.49	0.81	0.62	0.7192	0.81	1	T	0.0	B	0.0	B	0.038	N	1.000	P	-1.79	N	3.06	T	-0.984	T	0.000	T	0.109	-1.444	0.02	2.8	0.448	0.361	3.602	-1.444217	NA	1	0.757674	0.623468	ID=COSM150598;OCCURENCE=1(stomach)	0.768	NA	6.1069594
1041	2	74687550	74687550	T	C	exonic	WBP1	NA	synonymous SNV	WBP1:NM_012477:exon4:c.T552C:p.P184P	exonic	ENSG00000239779	NA	synonymous SNV	ENSG00000239779:ENST00000233615:exon4:c.T552C:p.P184P,ENSG00000239779:ENST00000409737:exon4:c.T543C:p.P181P,ENSG00000239779:ENST00000393972:exon5:c.T654C:p.P218P,ENSG00000239779:ENST00000428943:exon5:c.T729C:p.P243P	Score=397;Name=lod=55	NA	2p13.1	NA	NA	NA	NA	rs8469	0.49	0.49	0.438	0.524161	0.1581	0.8214	0.3156	0.8275	0.3323	0.15	0.82	0.25	0.81	0.2712	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.273371	NA	NA	0.130844	0.700182	NA	0.304	NA	6.1065226
1041	1	197128726	197128726	G	A	exonic	ZBTB41	NA	synonymous SNV	ZBTB41:NM_194314:exon10:c.C2493T:p.L831L	exonic	ENSG00000177888	NA	synonymous SNV	ENSG00000177888:ENST00000367405:exon10:c.C2493T:p.L831L	NA	NA	1q31.3	NA	NA	Name=13	NA	rs12128631	0.29	0.29	0.219	0.297724	0.17	0.6716	0.4251	0.0265	0.32	0.16	0.65	0.34	0.04	0.2392	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.149395	NA	NA	0.151163	0.044712	NA	0.232	NA	6.1063036
1041	2	198950029	198950029	A	G	exonic	PLCL1	NA	synonymous SNV	PLCL1:NM_006226:exon2:c.A1788G:p.Q596Q	exonic	ENSG00000115896	NA	synonymous SNV	ENSG00000115896:ENST00000437704:exon1:c.A1494G:p.Q498Q,ENSG00000115896:ENST00000428675:exon2:c.A1788G:p.Q596Q,ENSG00000115896:ENST00000487695:exon2:c.A1566G:p.Q522Q	Score=508;Name=lod=155	NA	2q33.1	NA	NA	NA	NA	rs2228135	0.24	0.24	0.244	0.232029	0.1909	0.248	0.1931	0.3578	0.1155	0.18	0.25	0.21	0.33	0.1907	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.441087	NA	NA	0.178953	0.324557	NA	0.152	NA	6.1061136
1041	11	5989415	5989415	C	A	exonic	OR56A5	NA	nonsynonymous SNV	OR56A5:NM_001146033:exon1:c.G310T:p.V104L	ncRNA_exonic	ENSG00000188691	NA	NA	NA	Score=393;Name=lod=53	NA	11p15.4	NA	NA	NA	NA	rs7114672	NA	NA	NA	0.170927	0.1909	0.3462	0.2968	0.0159	0.09	NA	NA	NA	NA	0.2038	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.615489	1.615489	0.03	NA	NA	NA	0.087	NA	6.1053
1041	17	18872581	18872581	C	T	intronic	SLC5A10	NA	NA	NA	UTR3	ENSG00000188522	ENST00000388995:c.*2091G>A	NA	NA	NA	NA	17p11.2	NA	Name=GABP	Name=7	NA	rs2074272	0.09	0.09	0.085	0.144968	0.0616	0.0913	0.0476	0.1634	0.3303	0.05	0.11	0.06	0.17	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.34123	NA	NA	NA	NA	NA	0.08	NA	6.1050667
1042	13	76423248	76423248	T	C	exonic	LMO7	NA	nonsynonymous SNV	LMO7:NM_015842:exon24:c.T3485C:p.M1162T,LMO7:NM_005358:exon26:c.T3338C:p.M1113T	exonic	ENSG00000136153	NA	nonsynonymous SNV	ENSG00000136153:ENST00000526202:exon22:c.T3116C:p.M1039T,ENSG00000136153:ENST00000465261:exon24:c.T3485C:p.M1162T,ENSG00000136153:ENST00000321797:exon25:c.T3485C:p.M1162T,ENSG00000136153:ENST00000341547:exon26:c.T3338C:p.M1113T,ENSG00000136153:ENST00000357063:exon28:c.T4340C:p.M1447T,ENSG00000136153:ENST00000377534:exon28:c.T4340C:p.M1447T	NA	NA	13q22.2	NA	NA	NA	NA	rs7986131	0.67	0.67	0.67	0.686901	0.7624	0.5377	0.7651	0.6422	0.7679	0.75	0.5	0.77	0.67	0.7203	0.77	1	T	0.0	B	0.0	B	0.550	N	1.000	P	-2.32	N	1.66	T	-0.943	T	0.000	T	0.065	-2.684	0	2.35	-0.074	-0.870	8.707	-2.684288	NA	1	0.74686	0.66591	ID=COSM1367703,COSM1367702,COSM1367704;OCCURENCE=1(large_intestine)	0.623	NA	6.1037734
1042	18	14132402	14132402	G	C	UTR5	ZNF519	NM_145287:c.-126C>G	NA	NA	UTR5	ENSG00000175322	ENST00000587419:c.-126C>G,ENST00000589498:c.-126C>G,ENST00000590202:c.-126C>G	NA	NA	NA	NA	18p11.21	NA	Name=Pol2-4H8,c-Fos,Sin3Ak-20,HA-E2F1,HEY1,TBP,GABP,E2F4,NF-YA,TAF1,E2F6_(H-50),TAF7_(SQ-8),Pol2,SP1,PU.1,NF-YB,ELF1_(SC-631),CHD2_(N-1250)	Name=148	NA	rs9958799	0.16	0.16	0.127	0.182907	0.2296	0.0962	0.2406	0.0983	0.2975	0.23	0.08	0.22	0.11	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.019524	NA	NA	NA	NA	NA	0.13	NA	6.1037334
1042	16	74664810	74664810	A	T	exonic	RFWD3	NA	synonymous SNV	RFWD3:NM_018124:exon10:c.T1623A:p.P541P	exonic	ENSG00000168411	NA	synonymous SNV	ENSG00000168411:ENST00000361070:exon10:c.T1623A:p.P541P,ENSG00000168411:ENST00000571750:exon11:c.T1623A:p.P541P	Score=598;Name=lod=359	NA	16q23.1	Score=859;Name=V$AP4_01	NA	NA	NA	rs7188880	0.63	0.63	0.634	0.659345	0.493	0.7897	0.4323	0.8116	0.6513	0.47	0.78	0.46	0.83	0.5521	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.447261	1.447261	NA	0.518023	0.755005	NA	0.63	NA	6.1035436
1042	6	70064187	70064187	G	A	exonic	BAI3	NA	synonymous SNV	BAI3:NM_001704:exon27:c.G3522A:p.S1174S	exonic	ENSG00000135298	NA	synonymous SNV	ENSG00000135298:ENST00000546190:exon5:c.G414A:p.S138S,ENSG00000135298:ENST00000238918:exon11:c.G1140A:p.S380S,ENSG00000135298:ENST00000370598:exon27:c.G3522A:p.S1174S	Score=667;Name=lod=682	NA	6q13	NA	NA	NA	NA	rs2296974	0.19	0.19	0.189	0.180511	0.1909	0.121	0.2421	0.2511	0.092	0.19	0.12	0.22	0.26	0.177	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.836147	NA	NA	0.196628	0.259873	ID=COSM150119;OCCURENCE=1(stomach)	0.232	NA	6.1021386
1042	20	44452697	44452697	C	A	exonic	TNNC2	NA	synonymous SNV	TNNC2:NM_003279:exon5:c.G384T:p.T128T	exonic	ENSG00000101470	NA	synonymous SNV	ENSG00000101470:ENST00000372555:exon5:c.G384T:p.T128T,ENSG00000101470:ENST00000372557:exon6:c.G339T:p.T113T	Score=520;Name=lod=173	NA	20q13.12	NA	Name=Pol2,ERalpha_a,USF-1	NA	NA	rs4629	0.45	0.45	0.42	0.404752	0.5378	0.5308	0.5476	0.1815	0.3384	0.56	0.53	0.49	0.16	0.4964	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.662505	NA	NA	0.530465	0.260554	NA	0.42	NA	6.1020016
1042	6	42932202	42932202	C	T	exonic	PEX6	NA	synonymous SNV	PEX6:NM_000287:exon17:c.G2814A:p.E938E	exonic	ENSG00000124587	NA	synonymous SNV	ENSG00000124587:ENST00000304611:exon17:c.G2814A:p.E938E	Score=389;Name=lod=51	NA	6p21.1	NA	NA	NA	NA	rs1129186	0.48	0.48	0.511	0.49361	0.5447	0.1687	0.428	0.7617	0.4601	0.55	0.19	0.43	0.76	0.4911	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.884632	NA	NA	0.52907	0.731276	ID=COSM1444601;OCCURENCE=1(large_intestine)	0.239	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000078573.1;CLNDSDB=.;CLNDSDBID=.	6.1017966
1042	1	40036847	40036847	G	C	intronic	PABPC4	NA	NA	NA	ncRNA_UTR3	ENSG00000090621	NA	NA	NA	Score=770;Name=lod=1794	NA	1p34.3	NA	Name=Pol2-4H8,Pol2(b)	NA	NA	rs2293476	0.14	0.14	0.122	0.0926518	0.2316	0.1012	0.1066	0.0106	0.0419	0.23	0.11	0.14	0.02	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.88787	4.88787	NA	NA	NA	NA	0.094	NA	6.1017333
1042	4	155488821	155488821	C	T	exonic	FGB	NA	synonymous SNV	FGB:NM_001184741:exon4:c.C390T:p.S130S,FGB:NM_005141:exon4:c.C567T:p.S189S	exonic	ENSG00000171564	NA	synonymous SNV	ENSG00000171564:ENST00000302068:exon4:c.C567T:p.S189S	NA	Name=Fibrinogen	4q31.3	NA	NA	NA	NA	rs6056	0.17	0.17	0.147	0.153355	0.1998	0.2242	0.1499	0.0756	0.1401	0.21	0.18	0.2	0.09	0.1745	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.632677	NA	NA	0.191047	0.088516	NA	0.167	NA	6.1013196
1042	15	34544468	34544468	C	T	exonic	SLC12A6	NA	synonymous SNV	SLC12A6:NM_001042497:exon8:c.G1191A:p.S397S,SLC12A6:NM_005135:exon9:c.G1083A:p.S361S,SLC12A6:NM_133647:exon9:c.G1236A:p.S412S,SLC12A6:NM_001042494:exon10:c.G1059A:p.S353S,SLC12A6:NM_001042495:exon10:c.G1059A:p.S353S,SLC12A6:NM_001042496:exon10:c.G1209A:p.S403S	exonic	ENSG00000140199	NA	synonymous SNV	ENSG00000140199:ENST00000451844:exon7:c.G672A:p.S224S,ENSG00000140199:ENST00000397707:exon8:c.G1191A:p.S397S,ENSG00000140199:ENST00000560164:exon8:c.G672A:p.S224S,ENSG00000140199:ENST00000290209:exon9:c.G1083A:p.S361S,ENSG00000140199:ENST00000559664:exon9:c.G1236A:p.S412S,ENSG00000140199:ENST00000560611:exon9:c.G1236A:p.S412S,ENSG00000140199:ENST00000561080:exon9:c.G1236A:p.S412S,ENSG00000140199:ENST00000354181:exon10:c.G1236A:p.S412S,ENSG00000140199:ENST00000397702:exon10:c.G1059A:p.S353S,ENSG00000140199:ENST00000458406:exon10:c.G1059A:p.S353S,ENSG00000140199:ENST00000558589:exon10:c.G1209A:p.S403S,ENSG00000140199:ENST00000558667:exon10:c.G1236A:p.S412S,ENSG00000140199:ENST00000559523:exon10:c.G1059A:p.S353S	Score=641;Name=lod=536	NA	15q14	NA	NA	NA	NA	rs2290940	0.2	0.2	0.187	0.206869	0.2068	0.2827	0.2003	0.1256	0.2434	0.22	0.27	0.2	0.11	0.1888	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.853939	NA	NA	0.170544	0.124943	NA	0.094	NA	6.1005226
1042	3	13896140	13896140	A	G	exonic	WNT7A	NA	synonymous SNV	WNT7A:NM_004625:exon3:c.T459C:p.S153S	exonic	ENSG00000154764	NA	synonymous SNV	ENSG00000154764:ENST00000285018:exon3:c.T459C:p.S153S	NA	NA	3p25.1	Score=831;Name=V$ATF_01	NA	NA	NA	rs3762719	0.27	0.27	0.217	0.250799	0.17	0.5813	0.2061	0.1293	0.1892	0.18	0.55	0.17	0.15	0.2143	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.561735	1.561735	NA	0.182209	0.175897	NA	0.29	NA	6.1001576
1042	15	34542872	34542872	C	G	exonic	SLC12A6	NA	synonymous SNV	SLC12A6:NM_001042497:exon10:c.G1506C:p.P502P,SLC12A6:NM_005135:exon11:c.G1398C:p.P466P,SLC12A6:NM_133647:exon11:c.G1551C:p.P517P,SLC12A6:NM_001042494:exon12:c.G1374C:p.P458P,SLC12A6:NM_001042495:exon12:c.G1374C:p.P458P,SLC12A6:NM_001042496:exon12:c.G1524C:p.P508P	exonic	ENSG00000140199	NA	synonymous SNV	ENSG00000140199:ENST00000451844:exon9:c.G987C:p.P329P,ENSG00000140199:ENST00000397707:exon10:c.G1506C:p.P502P,ENSG00000140199:ENST00000560164:exon10:c.G987C:p.P329P,ENSG00000140199:ENST00000290209:exon11:c.G1398C:p.P466P,ENSG00000140199:ENST00000559664:exon11:c.G1551C:p.P517P,ENSG00000140199:ENST00000560611:exon11:c.G1551C:p.P517P,ENSG00000140199:ENST00000561080:exon11:c.G1551C:p.P517P,ENSG00000140199:ENST00000354181:exon12:c.G1551C:p.P517P,ENSG00000140199:ENST00000397702:exon12:c.G1374C:p.P458P,ENSG00000140199:ENST00000458406:exon12:c.G1374C:p.P458P,ENSG00000140199:ENST00000558589:exon12:c.G1524C:p.P508P,ENSG00000140199:ENST00000558667:exon12:c.G1551C:p.P517P,ENSG00000140199:ENST00000559523:exon12:c.G1374C:p.P458P	Score=655;Name=lod=613	NA	15q14	NA	NA	NA	NA	rs17236798	0.2	0.2	0.187	0.207268	0.2068	0.2827	0.2017	0.1263	0.2434	0.22	0.27	0.2	0.11	0.1896	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.917963	NA	NA	0.170428	0.127896	NA	0.094	NA	6.0998386
1042	19	5786815	5786815	G	A	exonic	DUS3L	NA	synonymous SNV	DUS3L:NM_001161619:exon8:c.C705T:p.A235A,DUS3L:NM_020175:exon9:c.C1431T:p.A477A	exonic	ENSG00000141994	NA	synonymous SNV	ENSG00000141994:ENST00000320699:exon8:c.C705T:p.A235A,ENSG00000141994:ENST00000309061:exon9:c.C1431T:p.A477A	Score=591;Name=lod=335	NA	19p13.3	NA	NA	NA	NA	rs10811	0.3	0.3	0.257	0.312899	0.165	0.5437	0.1873	0.3298	0.2935	0.17	0.49	0.21	0.33	0.2454	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.701075	1.701075	NA	0.156927	0.304595	NA	0.261	NA	6.0993396
1042	2	10912719	10912719	G	A	exonic	ATP6V1C2	NA	synonymous SNV	ATP6V1C2:NM_001039362:exon8:c.G621A:p.V207V,ATP6V1C2:NM_144583:exon8:c.G621A:p.V207V	exonic	ENSG00000143882	NA	synonymous SNV	ENSG00000143882:ENST00000272238:exon8:c.G621A:p.V207V,ENSG00000143882:ENST00000381661:exon8:c.G621A:p.V207V	Score=556;Name=lod=243	NA	2p25.1	NA	NA	NA	NA	rs72777388	0.13	0.13	0.132	0.124201	0.2028	0.0526	0.1369	0.1558	0.0654	0.19	0.06	0.11	0.15	0.1583	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.431505	NA	NA	0.206279	0.147753	NA	0.217	NA	6.0992876
1042	5	78135201	78135201	C	T	exonic	ARSB	NA	synonymous SNV	ARSB:NM_000046:exon6:c.G1191A:p.P397P,ARSB:NM_198709:exon7:c.G1191A:p.P397P	exonic	ENSG00000113273	NA	synonymous SNV	ENSG00000113273:ENST00000264914:exon6:c.G1191A:p.P397P,ENSG00000113273:ENST00000396151:exon7:c.G1191A:p.P397P,ENSG00000113273:ENST00000565165:exon7:c.G1191A:p.P397P	NA	NA	5q14.1	NA	NA	NA	NA	rs25413	0.22	0.22	0.255	0.259185	0.1799	0.0486	0.1513	0.5628	0.2239	0.19	0.03	0.15	0.55	0.2007	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.358955	NA	NA	0.18686	0.496596	NA	0.246	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000078001.1;CLNDSDB=.;CLNDSDBID=.	6.0992066
1042	1	94474328	94474328	T	C	exonic	ABCA4	NA	synonymous SNV	ABCA4:NM_000350:exon41:c.A5814G:p.L1938L	exonic	ENSG00000198691	NA	synonymous SNV	ENSG00000198691:ENST00000535881:exon4:c.A171G:p.L57L,ENSG00000198691:ENST00000536513:exon6:c.A624G:p.L208L,ENSG00000198691:ENST00000370225:exon41:c.A5814G:p.L1938L	NA	NA	1p22.1	NA	NA	NA	NA	rs4147857	0.2	0.2	0.185	0.1875	0.1879	0.121	0.232	0.2678	0.1155	0.18	0.16	0.23	0.25	0.1886	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.963242	NA	NA	0.191163	0.237631	ID=COSM146562;OCCURENCE=1(stomach)	0.203	CLINSIG=non-pathogenic;CLNDBN=not_provided;CLNREVSTAT=single;CLNACC=RCV000085761.2;CLNDSDB=.;CLNDSDBID=.	6.0990036
1042	14	24728294	24728294	G	T	exonic	TGM1	NA	synonymous SNV	TGM1:NM_000359:exon7:c.C1146A:p.G382G	exonic	ENSG00000092295	NA	synonymous SNV	ENSG00000092295:ENST00000559136:exon3:c.C219A:p.G73G,ENSG00000092295:ENST00000206765:exon7:c.C1146A:p.G382G	Score=570;Name=lod=276	NA	14q12	NA	NA	NA	NA	rs1126432	0.17	0.17	0.178	0.155351	0.2028	0.0853	0.1657	0.1815	0.136	0.22	0.09	0.15	0.18	0.1697	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.410715	NA	NA	0.195349	0.17567	NA	0.145	NA	6.0988176
1042	1	85816134	85816134	T	C	exonic	DDAH1	NA	synonymous SNV	DDAH1:NM_012137:exon4:c.A561G:p.A187A,DDAH1:NM_001134445:exon5:c.A252G:p.A84A	exonic	ENSG00000153904	NA	synonymous SNV	ENSG00000153904:ENST00000284031:exon4:c.A561G:p.A187A,ENSG00000153904:ENST00000426972:exon4:c.A282G:p.A94A,ENSG00000153904:ENST00000539042:exon4:c.A561G:p.A187A,ENSG00000153904:ENST00000542148:exon4:c.A261G:p.A87A,ENSG00000153904:ENST00000535924:exon5:c.A252G:p.A84A	Score=605;Name=lod=382	NA	1p22.3	NA	NA	NA	NA	rs2230820	0.14	0.14	0.12	0.124601	0.2038	0.1567	0.1974	0.0204	0.0992	0.21	0.15	0.17	0.01	0.1658	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.658824	1.658824	NA	0.199767	0.047435	NA	0.123	NA	6.0972996
1042	13	46103935	46103935	A	G	exonic	COG3	NA	nonsynonymous SNV	COG3:NM_031431:exon21:c.A2240G:p.N747S	exonic	ENSG00000136152	NA	nonsynonymous SNV	ENSG00000136152:ENST00000349995:exon21:c.A2240G:p.N747S	NA	NA	13q14.13	NA	NA	NA	NA	rs2274285	0.7	0.7	0.66	0.681909	0.7356	0.7798	0.8156	0.4357	0.7638	0.73	0.81	0.79	0.47	0.7449	0.81	0.82	T	0.0	B	0.0	B	0.002	N	0.993	P	1.445	L	0.94	T	-0.942	T	0.000	T	0.009	-1.618	0.013	-1.32	-0.165	2.427	6.300	-1.617769	NA	0.72	0.756512	0.495007	NA	0.609	NA	6.0963214
1042	5	33751454	33751454	A	T	intronic	ADAMTS12	NA	NA	NA	exonic	ENSG00000151388	NA	stopgain	ENSG00000151388:ENST00000515401:exon3:c.T689A:p.L230X	NA	NA	5p13.3	NA	NA	Name=8	NA	rs1530507	0.59	0.59	0.578	0.556909	0.7336	0.5605	0.6513	0.3729	0.5532	0.73	0.55	0.64	0.37	0.6706	0.73	1	T	.	.	.	.	.	.	0.428	P	.	.	.	.	.	.	.	.	.	2.562	14.53	1.06	-0.008	0.502	6.476	2.562141	2.562141	NA	NA	NA	ID=COSM149808;OCCURENCE=1(stomach)	0.522	NA	6.0958
1042	1	166818566	166818566	A	G	exonic	POGK	NA	synonymous SNV	POGK:NM_017542:exon5:c.A750G:p.A250A	exonic	ENSG00000143157	NA	synonymous SNV	ENSG00000143157:ENST00000537173:exon3:c.A396G:p.A132A,ENSG00000143157:ENST00000536514:exon4:c.A495G:p.A165A,ENSG00000143157:ENST00000367875:exon5:c.A750G:p.A250A,ENSG00000143157:ENST00000367876:exon5:c.A750G:p.A250A	NA	NA	1q24.1	Score=956;Name=V$CREL_01	NA	NA	NA	rs2075946	0.26	0.26	0.242	0.276757	0.162	0.5565	0.17	0.152	0.3507	0.16	0.53	0.17	0.18	0.2239	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.493089	NA	NA	0.185233	0.174535	NA	0.217	NA	6.0955336
1042	1	114423653	114423653	C	T	ncRNA_UTR3	BCL2L15	NA	NA	NA	ncRNA_UTR3	ENSG00000188761	NA	NA	NA	NA	NA	1p13.2	NA	Name=TBP	Name=17	NA	rs1217382	0.37	0.37	0.384	0.401158	0.2644	0.0813	0.2608	0.9002	0.2965	0.27	0.09	0.29	0.9	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.379863	NA	NA	0.30704	0.799133	NA	0.391	NA	6.0952266
1043	4	140587125	140587125	A	T	UTR5	MGST2	NM_002413:c.-49A>T,NM_001204368:c.-49A>T,NM_001204367:c.-29272A>T,NM_001204366:c.-49A>T	NA	NA	UTR5	ENSG00000085871	ENST00000265498:c.-49A>T,ENST00000506797:c.-49A>T	NA	NA	NA	NA	4q31.1	NA	Name=Pol2,SP1,Pol2(phosphoS2),TCF4,YY1,HNF4A,YY1_(C-20),Sin3Ak-20,HDAC2_(SC-6296),Pol2-4H8,GATA-2,c-Fos,TAF1,GATA-1,FOSL2,FOXA1_(C-20),HNF4A_(H-171),GABP,p300,BHLHE40,TCF12,TBP,RXRA,ELF1_(SC-631),FOXA1_(SC-101058),AP-2gamma,FOXA2_(SC-6554),HEY1,HNF4G_(SC-6558),SRF	Name=144	NA	rs2132845	0.14	0.14	0.158	0.153954	0.0716	0.1696	0.0706	0.2723	0.1217	0.06	0.17	0.07	0.28	0.0949	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.244719	1.244719	NA	0.072093	0.251021	ID=COSN167337;OCCURENCE=1(large_intestine)	0.152	NA	6.0947404
1043	6	11185533	11185533	G	A	exonic	NEDD9	NA	synonymous SNV	NEDD9:NM_001271033:exon6:c.C1920T:p.T640T,NEDD9:NM_006403:exon7:c.C2367T:p.T789T,NEDD9:NM_001142393:exon8:c.C2367T:p.T789T	exonic	ENSG00000111859	NA	synonymous SNV	ENSG00000111859:ENST00000379446:exon7:c.C2367T:p.T789T,ENSG00000111859:ENST00000504387:exon8:c.C2367T:p.T789T	NA	NA	6p24.2	Score=829;Name=V$RFX1_02	Name=Pol2,YY1,YY1_(C-20)	NA	NA	rs1050775	0.49	0.49	0.521	0.492013	0.5477	0.3492	0.4236	0.6452	0.4233	0.54	0.33	0.4	0.66	0.4905	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.682935	NA	NA	0.534302	0.630504	ID=COSM150051;OCCURENCE=1(stomach)	0.601	NA	6.0941646
1043	6	152615200	152615200	G	A	exonic	SYNE1	NA	synonymous SNV	SYNE1:NM_033071:exon93:c.C17532T:p.H5844H,SYNE1:NM_182961:exon94:c.C17745T:p.H5915H	exonic	ENSG00000131018	NA	synonymous SNV	ENSG00000131018:ENST00000540663:exon2:c.C270T:p.H90H,ENSG00000131018:ENST00000537033:exon3:c.C411T:p.H137H,ENSG00000131018:ENST00000356820:exon9:c.C1317T:p.H439H,ENSG00000131018:ENST00000423061:exon93:c.C17532T:p.H5844H,ENSG00000131018:ENST00000265368:exon94:c.C17745T:p.H5915H,ENSG00000131018:ENST00000367255:exon94:c.C17745T:p.H5915H,ENSG00000131018:ENST00000448038:exon94:c.C17532T:p.H5844H,ENSG00000131018:ENST00000341594:exon95:c.C16581T:p.H5527H	NA	NA	6q25.2	NA	NA	NA	NA	rs12664753	0.16	0.16	0.144	0.147764	0.1938	0.1677	0.1729	0.0129	0.2444	0.21	0.2	0.19	0.02	0.1875	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.502045	NA	NA	0.191744	0.046527	NA	0.13	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118454.2;CLNDSDB=.;CLNDSDBID=.	6.0936226
1043	14	24773387	24773387	T	C	exonic	NOP9	NA	synonymous SNV	NOP9:NM_174913:exon8:c.T1551C:p.L517L	exonic	ENSG00000196943	NA	synonymous SNV	ENSG00000196943:ENST00000267425:exon8:c.T1551C:p.L517L,ENSG00000196943:ENST00000396802:exon8:c.T1551C:p.L517L	Score=433;Name=lod=77	NA	14q12	NA	NA	NA	NA	rs2144494	0.15	0.15	0.128	0.14377	0.1849	0.004	0.3444	0.1346	0.1155	0.2	0.01	0.3	0.14	0.1811	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.932638	NA	NA	0.207209	0.147526	NA	0.13	NA	6.0934576
1043	17	10231417	10231417	C	T	exonic	MYH13	NA	synonymous SNV	MYH13:NM_003802:exon22:c.G2457A:p.Q819Q	exonic	ENSG00000006788	NA	synonymous SNV	ENSG00000006788:ENST00000418404:exon21:c.G2457A:p.Q819Q,ENSG00000006788:ENST00000252172:exon22:c.G2457A:p.Q819Q,ENSG00000006788:ENST00000570743:exon22:c.G2457A:p.Q819Q	Score=514;Name=lod=163	NA	17p13.1	NA	NA	NA	NA	rs2277644	0.28	0.28	0.274	0.275359	0.167	0.5159	0.2291	0.1974	0.2771	0.17	0.54	0.22	0.19	0.2306	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.826793	NA	NA	0.175779	0.194166	NA	0.304	NA	6.0932876
1043	10	91498127	91498127	T	C	exonic	KIF20B	NA	nonsynonymous SNV	KIF20B:NM_016195:exon20:c.T3409C:p.C1137R	exonic	ENSG00000138182	NA	nonsynonymous SNV	ENSG00000138182:ENST00000260753:exon20:c.T3409C:p.C1137R,ENSG00000138182:ENST00000371728:exon20:c.T3529C:p.C1177R,ENSG00000138182:ENST00000394289:exon20:c.T3529C:p.C1177R,ENSG00000138182:ENST00000416354:exon20:c.T3619C:p.C1207R	NA	NA	10q23.31	NA	NA	NA	NA	rs1886996	0.81	0.81	0.816	0.857428	0.7346	0.9355	0.8026	0.848	0.955	0.74	0.94	0.78	0.79	0.7934	0.94	0.57	T	0.0	B	0.001	B	0.862	N	1.000	P	1.935	M	-0.27	T	-0.949	T	0.000	T	0.013	-1.743	0.01	0.459	-0.115	0.563	3.875	-1.743058	NA	0.13	0.713239	0.842955	NA	0.804	NA	6.0920944
1043	7	64023437	64023437	A	G	UTR5	ZNF680	NM_178558:c.-105T>C,NM_001130022:c.-105T>C	NA	NA	UTR5	ENSG00000173041	ENST00000309683:c.-105T>C	NA	NA	NA	NA	7q11.21	NA	Name=CHD2_(N-1250),ELF1_(SC-631),NF-YB,SP1,Pol2,TCF4,Pol2(phosphoS2),TAF1,SP2_(SC-643),NF-YA,E2F4,GABP,TBP,IRF1,NFKB,HEY1,IRF3,RFX5_(N-494),Sin3Ak-20,Pol2-4H8,c-Fos,ZNF263	Name=146	NA	rs6965883	0.2	0.2	0.157	0.201478	0.2416	0.0833	0.2176	0.1906	0.2853	0.26	0.09	0.22	0.22	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.250613	NA	NA	NA	NA	NA	0.145	NA	6.0917334
1043	18	56204977	56204977	C	T	exonic	ALPK2	NA	synonymous SNV	ALPK2:NM_052947:exon5:c.G2442A:p.T814T	exonic	ENSG00000198796	NA	synonymous SNV	ENSG00000198796:ENST00000361673:exon5:c.G2442A:p.T814T	NA	NA	18q21.32	Score=839;Name=V$RFX1_01	Name=Pol2,POU2F2,Oct-2,Pol2-4H8	NA	NA	rs3809971	0.44	0.44	0.44	0.404153	0.5726	0.2361	0.4294	0.4312	0.3497	0.59	0.24	0.51	0.38	0.469	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.300179	NA	NA	0.533605	0.450068	NA	0.529	NA	6.0914616
1043	11	6478619	6478619	G	A	exonic	TRIM3	NA	synonymous SNV	TRIM3:NM_001248007:exon4:c.C246T:p.I82I,TRIM3:NM_001248006:exon5:c.C603T:p.I201I,TRIM3:NM_033278:exon5:c.C603T:p.I201I,TRIM3:NM_006458:exon6:c.C603T:p.I201I	exonic	ENSG00000110171	NA	synonymous SNV	ENSG00000110171:ENST00000536344:exon4:c.C246T:p.I82I,ENSG00000110171:ENST00000345851:exon5:c.C603T:p.I201I,ENSG00000110171:ENST00000525074:exon5:c.C603T:p.I201I,ENSG00000110171:ENST00000537602:exon5:c.C603T:p.I201I,ENSG00000110171:ENST00000359518:exon6:c.C603T:p.I201I,ENSG00000110171:ENST00000528227:exon6:c.C603T:p.I201I	Score=583;Name=lod=312	NA	11p15.4	NA	NA	NA	NA	rs16913748	0.16	0.16	0.184	0.1873	0.1849	0.0188	0.1772	0.2973	0.2219	0.19	0.02	0.15	0.29	0.1854	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.768633	NA	NA	0.205307	0.288732	NA	0.297	NA	6.0910596
1043	13	28893642	28893642	A	G	exonic	FLT1	NA	synonymous SNV	FLT1:NM_002019:exon24:c.T3204C:p.P1068P	exonic	ENSG00000102755	NA	synonymous SNV	ENSG00000102755:ENST00000543394:exon4:c.T273C:p.P91P,ENSG00000102755:ENST00000540678:exon11:c.T858C:p.P286P,ENSG00000102755:ENST00000282397:exon24:c.T3204C:p.P1068P	Score=606;Name=lod=387	NA	13q12.2	NA	NA	NA	NA	rs2296189	0.18	0.18	0.155	0.243011	0.169	0.1825	0.1124	0.2806	0.4233	0.16	0.17	0.13	0.25	0.2188	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.644024	1.644024	NA	0.188837	0.263504	NA	0.268	NA	6.0900296
1043	7	130080812	130080812	T	G	UTR5	CEP41	NM_018718:c.-5A>C,NM_001257159:c.-5A>C,NM_001257158:c.-5A>C,NM_001257160:c.-5A>C	NA	NA	UTR5	ENSG00000106477	ENST00000223208:c.-5A>C,ENST00000541543:c.-5A>C,ENST00000484549:c.-5A>C,ENST00000343969:c.-5A>C,ENST00000471201:c.-5A>C,ENST00000489512:c.-5A>C	NA	NA	Score=554;Name=lod=237	NA	7q32.2	NA	Name=NF-YB,ELF1_(SC-631),CHD2_(N-1250),GABP,TAF1,TR4,Pol2,SP1,IRF1,Pol2-4H8,c-Fos,HA-E2F1	Name=148	NA	rs2287371	0.47	0.47	0.43	0.478634	0.3907	0.6696	0.5432	0.2882	0.5838	0.38	0.7	0.54	0.29	0.4493	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.982181	2.982181	NA	0.403837	0.307989	NA	0.145	NA	6.0894964
1043	7	66774604	66774604	G	C	ncRNA_exonic	STAG3L4	NA	NA	NA	ncRNA_exonic	ENSG00000106610	NA	NA	NA	Score=619;Name=lod=439	NA	7q11.21	NA	NA	NA	NA	rs1045513	0.6	0.6	0.6	0.608427	0.5249	0.6875	0.572	0.6581	0.5716	0.53	0.69	0.55	0.65	0.5545	0.69	0.49	T	0.002	B	0.001	B	0.029	N	.	.	.	.	.	.	-0.946	T	0.000	T	.	0.142	4.762	-1.05	-1.935	-0.566	3.528	0.141626	NA	0.24	0.499419	0.65547	ID=COSM1451880;OCCURENCE=1(large_intestine)	0.565	NA	6.0878476
1043	19	4352838	4352838	C	G	intronic	MPND	NA	NA	NA	ncRNA_intronic	ENSG00000269807	NA	NA	NA	NA	NA	19p13.3	NA	Name=Znf143_(16618-1-AP),SMC3_(ab9263),USF1_(SC-8983),Rad21,CTCF,ZBTB7A_(SC-34508),CTCF_(C-20)	Name=139	NA	rs11668187	0.63	0.63	NA	0.191893	0.2455	0.0853	0.2939	0.1717	0.2014	0.52	0.73	0.66	0.67	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.981048	NA	NA	NA	NA	NA	NA	NA	6.0878333
1043	10	52103707	52103707	A	G	exonic	SGMS1	NA	synonymous SNV	SGMS1:NM_147156:exon7:c.T168C:p.N56N	exonic	ENSG00000198964	NA	synonymous SNV	ENSG00000198964:ENST00000361543:exon1:c.T168C:p.N56N,ENSG00000198964:ENST00000361781:exon7:c.T168C:p.N56N	Score=596;Name=lod=354	NA	10q11.23	Score=871;Name=V$YY1_01	NA	NA	NA	rs10763354	0.54	0.54	0.514	0.501997	0.5298	0.4861	0.6311	0.5212	0.3722	0.53	0.5	0.64	0.52	0.5201	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.925296	NA	NA	0.529186	0.539946	NA	0.572	NA	6.0875806
1043	1	48459907	48459907	C	T	exonic	TRABD2B	NA	synonymous SNV	TRABD2B:NM_001194986:exon2:c.G465A:p.A155A	exonic	ENSG00000204018	NA	synonymous SNV	ENSG00000204018:ENST00000371865:exon2:c.G465A:p.A155A	NA	NA	1p33	Score=888;Name=V$NCX_01	NA	NA	NA	rs3814006	0.2	0.2	0.18	0.165735	0.2793	0.253	0.2233	0.0144	0.1227	0.28	0.22	0.23	0.03	0.3003	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.192974	NA	NA	NA	NA	ID=COSM426409;OCCURENCE=1(breast)	0.232	NA	6.0870666
1043	19	52076481	52076481	C	A	UTR5	ZNF175	NM_007147:c.-102C>A	NA	NA	UTR5	ENSG00000105497	ENST00000262259:c.-102C>A,ENST00000545217:c.-102C>A,ENST00000596504:c.-102C>A	NA	NA	NA	NA	19q13.41	NA	Name=c-Fos	Name=73	NA	rs2305371	0.39	0.39	0.381	0.386781	0.2465	0.7599	0.2637	0.2988	0.3528	0.24	0.77	0.24	0.3	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.433558	NA	NA	NA	NA	NA	0.268	NA	6.0868334
1043	1	29529699	29529699	T	C	exonic	MECR	NA	synonymous SNV	MECR:NM_001024732:exon5:c.A369G:p.A123A,MECR:NM_016011:exon5:c.A597G:p.A199A	exonic	ENSG00000116353	NA	synonymous SNV	ENSG00000116353:ENST00000463412:exon3:c.A216G:p.A72A,ENSG00000116353:ENST00000263702:exon5:c.A597G:p.A199A,ENSG00000116353:ENST00000373791:exon5:c.A369G:p.A123A	Score=606;Name=lod=386	NA	1p35.3	Score=881;Name=V$CEBPB_02	Name=HA-E2F1,ZNF263,Pol2,Pol2(phosphoS2),CHD2_(N-1250),CTCF,ELF1_(SC-631)	NA	NA	rs1062924	0.76	0.76	0.754	0.746805	0.8807	0.5615	0.7493	0.8238	0.6943	0.88	0.53	0.79	0.8	0.8089	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.454662	1.454662	NA	0.890556	0.848547	NA	0.746	NA	6.0865106
1043	X	24807111	24807111	C	T	intronic	POLA1	NA	NA	NA	ncRNA_exonic	ENSG00000232472	NA	NA	NA	Score=529;Name=lod=188	NA	Xp22.11	NA	NA	NA	NA	rs200370419	NA	NA	0.14626	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2475	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.39622	NA	NA	NA	NA	NA	NA	CLINSIG=other;CLNDBN=Malignant_melanoma;CLNREVSTAT=not;CLNACC=RCV000073157.2;CLNDSDB=MedGen:SNOMED_CT;CLNDSDBID=C0025202:2092003	6.0858333
1044	6	157405930	157405930	G	A	exonic	ARID1B	NA	synonymous SNV	ARID1B:NM_017519:exon5:c.G2133A:p.A711A,ARID1B:NM_020732:exon6:c.G2172A:p.A724A	exonic	ENSG00000049618	NA	synonymous SNV	ENSG00000049618:ENST00000319584:exon3:c.G399A:p.A133A,ENSG00000049618:ENST00000275248:exon5:c.G1959A:p.A653A,ENSG00000049618:ENST00000350026:exon5:c.G2133A:p.A711A,ENSG00000049618:ENST00000367148:exon5:c.G2133A:p.A711A,ENSG00000049618:ENST00000414678:exon5:c.G630A:p.A210A,ENSG00000049618:ENST00000346085:exon6:c.G2172A:p.A724A	NA	NA	6q25.3	Score=863;Name=V$BACH2_01	NA	NA	NA	rs3734441	0.5	0.5	0.496	0.495208	0.5239	0.5734	0.6254	0.2806	0.5828	0.52	0.58	0.59	0.32	0.519	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.229855	NA	NA	0.538953	0.343168	ID=COSM450794,COSM1487405;OCCURENCE=1(breast)	0.449	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000114263.1;CLNDSDB=.;CLNDSDBID=.	6.0848136
1044	1	77759578	77759578	A	G	exonic	AK5	NA	synonymous SNV	AK5:NM_012093:exon3:c.A270G:p.A90A,AK5:NM_174858:exon3:c.A348G:p.A116A	exonic	ENSG00000154027	NA	synonymous SNV	ENSG00000154027:ENST00000344720:exon3:c.A270G:p.A90A,ENSG00000154027:ENST00000354567:exon3:c.A348G:p.A116A,ENSG00000154027:ENST00000478407:exon3:c.A270G:p.A90A	Score=568;Name=lod=271	NA	1p31.1	NA	NA	NA	NA	rs2815311	0.13	0.13	0.132	0.115016	0.2038	0.1359	0.1023	0.0613	0.0838	0.2	0.12	0.12	0.05	0.1681	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.897242	1.897242	NA	0.21	0.075579	NA	0.109	NA	6.0847666
1044	6	29069299	29069299	C	T	intergenic	OR2B3,OR2J3	dist=14209;dist=10369	NA	NA	exonic	ENSG00000204702	NA	stopgain	ENSG00000204702:ENST00000377171:exon1:c.C580T:p.Q194X	NA	NA	6p22.1	NA	NA	NA	NA	rs2394517	0.39	0.39	0.36	0.337061	0.5815	0.3512	0.4323	0.0461	0.3967	0.61	0.34	0.43	0.05	0.5007	0.61	0.44	T	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	4.625	25.3	0.285	0.357	-2.230	1.251	4.625129	4.625129	0.62	NA	NA	NA	0.304	NA	6.0844667
1044	11	130777886	130777886	G	A	exonic	SNX19	NA	synonymous SNV	SNX19:NM_014758:exon5:c.C2127T:p.T709T	exonic	ENSG00000120451	NA	synonymous SNV	ENSG00000120451:ENST00000265909:exon5:c.C2127T:p.T709T,ENSG00000120451:ENST00000528555:exon5:c.C267T:p.T89T,ENSG00000120451:ENST00000533214:exon5:c.C2127T:p.T709T,ENSG00000120451:ENST00000530356:exon6:c.C267T:p.T89T,ENSG00000120451:ENST00000539184:exon6:c.C456T:p.T152T	Score=483;Name=lod=122	NA	11q24.3	NA	NA	NA	NA	rs2276098	0.15	0.15	0.138	0.129593	0.1988	0.1637	0.0893	0.0492	0.1605	0.2	0.19	0.1	0.05	0.1757	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.744016	NA	NA	0.208168	0.071558	NA	0.217	NA	6.0839986
1044	20	61528306	61528306	A	G	exonic	DIDO1	NA	nonsynonymous SNV	DIDO1:NM_001193369:exon7:c.T1631C:p.M544T,DIDO1:NM_001193370:exon7:c.T1631C:p.M544T,DIDO1:NM_033081:exon7:c.T1631C:p.M544T,DIDO1:NM_080797:exon7:c.T1631C:p.M544T	exonic	ENSG00000101191	NA	nonsynonymous SNV	ENSG00000101191:ENST00000266070:exon7:c.T1631C:p.M544T,ENSG00000101191:ENST00000395335:exon7:c.T1631C:p.M544T,ENSG00000101191:ENST00000395340:exon7:c.T1631C:p.M544T,ENSG00000101191:ENST00000395343:exon7:c.T1631C:p.M544T	NA	NA	20q13.33	NA	NA	NA	NA	rs1883848	0.47	0.47	0.427	0.486821	0.3877	0.629	0.5014	0.4395	0.4959	0.36	0.62	0.52	0.42	0.4493	0.62	0.56	T	0.0	B	0.0	B	0.630	N	1.000	P	-0.895	N	3.23	T	-0.967	T	0.000	T	0.017	0.035	4.197	-1.16	-0.468	0.881	10.484	0.035244	NA	0.36	0.412963	0.428507	ID=COSM444190;OCCURENCE=1(breast)	0.377	NA	6.0833704
1044	17	76131070	76131070	G	A	exonic	TMC8	NA	synonymous SNV	TMC8:NM_152468:exon9:c.G1107A:p.E369E	exonic	ENSG00000167895	NA	synonymous SNV	ENSG00000167895:ENST00000589691:exon8:c.G438A:p.E146E,ENSG00000167895:ENST00000318430:exon9:c.G1107A:p.E369E	Score=395;Name=lod=54	NA	17q25.3	NA	Name=ELF1_(SC-631)	NA	NA	rs12452890	0.56	0.56	0.57	0.540335	0.5288	0.3938	0.6268	0.7231	0.3947	0.53	0.44	0.65	0.69	0.5343	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.959822	NA	0	0.520581	0.685656	NA	0.543	NA	6.0829856
1044	1	205306590	205306590	G	A	exonic	KLHDC8A	NA	synonymous SNV	KLHDC8A:NM_018203:exon6:c.C990T:p.A330A,KLHDC8A:NM_001271864:exon7:c.C990T:p.A330A,KLHDC8A:NM_001271865:exon8:c.C990T:p.A330A,KLHDC8A:NM_001271863:exon9:c.C990T:p.A330A	exonic	ENSG00000162873	NA	synonymous SNV	ENSG00000162873:ENST00000537168:exon5:c.C651T:p.A217A,ENSG00000162873:ENST00000367155:exon6:c.C990T:p.A330A,ENSG00000162873:ENST00000460687:exon6:c.C588T:p.A196A,ENSG00000162873:ENST00000539253:exon6:c.C990T:p.A330A,ENSG00000162873:ENST00000367156:exon9:c.C990T:p.A330A	NA	NA	1q32.1	Score=814;Name=V$CMYB_01	NA	NA	NA	rs3210952	0.2	0.2	0.18	0.178514	0.2127	0.3383	0.17	0.0219	0.1963	0.21	0.31	0.22	0.03	0.1845	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.05183	NA	NA	0.186512	0.046074	NA	0.116	NA	6.0829546
1044	3	97868616	97868616	C	T	exonic	OR5H14	NA	synonymous SNV	OR5H14:NM_001005514:exon1:c.C387T:p.P129P	exonic	ENSG00000236032	NA	synonymous SNV	ENSG00000236032:ENST00000437310:exon1:c.C387T:p.P129P	Score=449;Name=lod=89	NA	3q11.2	Score=842;Name=V$OCT1_01	NA	NA	NA	rs4379004	0.59	0.59	0.582	0.631989	0.5358	0.5238	0.585	0.8601	0.5675	0.51	0.55	0.51	0.83	0.5678	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.166512	NA	NA	0.480976	0.750228	NA	0.319	NA	6.0820906
1044	19	36575645	36575645	G	A	exonic	WDR62	NA	synonymous SNV	WDR62:NM_001083961:exon12:c.G1641A:p.T547T,WDR62:NM_173636:exon12:c.G1641A:p.T547T	exonic	ENSG00000075702	NA	synonymous SNV	ENSG00000075702:ENST00000270301:exon12:c.G1641A:p.T547T,ENSG00000075702:ENST00000401500:exon12:c.G1641A:p.T547T	NA	NA	19q13.12	Score=900;Name=V$AREB6_01	NA	NA	NA	rs2301734	0.14	0.14	0.136	0.125	0.1948	0.1726	0.1311	0.0121	0.1524	0.19	0.18	0.15	0.02	0.1789	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.915821	NA	NA	0.21093	0.041534	ID=COSM148600;OCCURENCE=1(stomach)	0.217	NA	6.0820366
1044	2	201931730	201931730	T	C	intronic	FAM126B	NA	NA	NA	ncRNA_exonic	ENSG00000226658	NA	NA	NA	Score=718;Name=lod=1107	NA	2q33.1	NA	NA	Name=3	NA	rs16842071	0.28	0.28	0.318	0.297125	0.2525	0.0149	0.1787	0.7209	0.1452	0.26	0.01	0.2	0.69	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.332243	NA	NA	NA	NA	NA	0.37	NA	6.0808333
1044	12	124867996	124867996	G	T	intronic	NCOR2	NA	NA	NA	ncRNA_exonic	ENSG00000255965	NA	NA	NA	Score=265;Name=lod=16	NA	12q24.31	NA	Name=Pol2	NA	NA	rs1268891	0.36	0.36	0.338	0.351837	0.2525	0.6379	0.2781	0.292	0.2924	0.26	0.64	0.27	0.27	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.022775	NA	NA	NA	NA	NA	0.275	NA	6.0808333
1044	20	33574765	33574765	T	C	exonic	MYH7B	NA	synonymous SNV	MYH7B:NM_020884:exon15:c.T1107C:p.N369N	exonic	ENSG00000078814	NA	synonymous SNV	ENSG00000078814:ENST00000262873:exon13:c.T1107C:p.N369N	Score=531;Name=lod=191	NA	20q11.22	NA	NA	NA	NA	rs3746446	0.17	0.17	0.175	0.174521	0.1948	0.1071	0.134	0.1649	0.2648	0.2	0.12	0.16	0.17	0.1959	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.139826	NA	NA	0.195298	0.173311	NA	0.275	NA	6.0806686
1044	19	36549690	36549690	C	T	exonic	WDR62	NA	synonymous SNV	WDR62:NM_001083961:exon2:c.C186T:p.L62L,WDR62:NM_173636:exon2:c.C186T:p.L62L	exonic	ENSG00000075702	NA	synonymous SNV	ENSG00000075702:ENST00000270301:exon2:c.C186T:p.L62L,ENSG00000075702:ENST00000388999:exon2:c.C186T:p.L62L,ENSG00000075702:ENST00000401500:exon2:c.C186T:p.L62L,ENSG00000075702:ENST00000427823:exon2:c.C168T:p.L56L,ENSG00000075702:ENST00000587391:exon2:c.C186T:p.L62L	Score=564;Name=lod=261	NA	19q13.12	NA	NA	NA	NA	rs11538454	0.14	0.14	0.133	0.125599	0.1958	0.1716	0.1326	0.0121	0.1544	0.19	0.18	0.15	0.02	0.1795	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.342008	1.342008	NA	0.210814	0.041761	ID=COSM148599;OCCURENCE=1(stomach)	0.232	NA	6.0805526
1044	1	236175339	236175339	T	C	exonic	NID1	NA	synonymous SNV	NID1:NM_002508:exon12:c.A2409G:p.V803V	exonic	ENSG00000116962	NA	synonymous SNV	ENSG00000116962:ENST00000264187:exon12:c.A2409G:p.V803V	Score=479;Name=lod=118	NA	1q42.3	NA	NA	Name=6	NA	rs2031487	0.64	0.64	0.593	0.696685	0.5	0.7698	0.6427	0.795	0.729	0.5	0.75	0.6	0.78	0.5915	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.338909	1.338909	NA	0.495233	0.760554	NA	0.645	NA	6.0799336
1044	2	198327314	198327314	G	A	exonic	COQ10B	NA	synonymous SNV	COQ10B:NM_025147:exon3:c.G306A:p.K102K	exonic	ENSG00000115520	NA	synonymous SNV	ENSG00000115520:ENST00000409398:exon2:c.G156A:p.K52K,ENSG00000115520:ENST00000263960:exon3:c.G306A:p.K102K,ENSG00000115520:ENST00000409010:exon3:c.G222A:p.K74K,ENSG00000115520:ENST00000545340:exon3:c.G177A:p.K59K	Score=544;Name=lod=217	NA	2q33.1	NA	NA	NA	NA	rs3754822	0.17	0.17	0.185	0.145767	0.2157	0.2282	0.1729	0.053	0.0951	0.2	0.24	0.18	0.05	0.1741	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.982351	NA	NA	0.197326	0.086473	NA	0.109	NA	6.0795406
1044	17	46608030	46608030	G	A	exonic	HOXB1	NA	synonymous SNV	HOXB1:NM_002144:exon1:c.C237T:p.S79S	exonic	ENSG00000120094	NA	synonymous SNV	ENSG00000120094:ENST00000239174:exon1:c.C237T:p.S79S,ENSG00000120094:ENST00000577092:exon1:c.C237T:p.S79S	NA	NA	17q21.32	Score=772;Name=V$AHR_01	NA	NA	NA	rs12946855	0.13	0.13	0.119	0.134185	0.2048	0.0972	0.1225	0.1172	0.1309	0.21	0.06	0.12	0.11	0.1772	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.20966	NA	NA	0.205212	0.126022	NA	0.188	NA	6.0794546
1044	4	42003671	42003671	A	G	exonic	SLC30A9	NA	nonsynonymous SNV	SLC30A9:NM_006345:exon2:c.A148G:p.M50V	exonic	ENSG00000014824	NA	nonsynonymous SNV	ENSG00000014824:ENST00000264451:exon2:c.A148G:p.M50V,ENSG00000014824:ENST00000513699:exon2:c.A148G:p.M50V	NA	NA	4p13	NA	NA	NA	NA	rs1047626	0.67	0.67	0.608	0.628395	0.7565	0.9484	0.768	0.1051	0.7751	0.77	0.95	0.75	0.12	0.737	0.95	1	T	0.0	B	0.0	B	0.337	N	1.000	P	0.69	N	2.06	T	-0.949	T	0.000	T	0.017	-2.015	0.007	-2.85	-0.527	-0.933	4.598	-2.01514	NA	1	0.761163	0.213118	NA	0.522	NA	6.0786704
1044	19	46387503	46387503	T	C	exonic	IRF2BP1	NA	synonymous SNV	IRF2BP1:NM_015649:exon1:c.A1530G:p.L510L	exonic	ENSG00000170604	NA	synonymous SNV	ENSG00000170604:ENST00000302165:exon1:c.A1530G:p.L510L	Score=638;Name=lod=520	NA	19q13.32	NA	NA	NA	NA	rs3745926	0.31	0.31	0.334	0.321486	0.169	0.3125	0.3127	0.5764	0.1493	0.16	0.32	0.33	0.51	0.2317	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.222804	NA	NA	0.187456	0.486752	NA	0.283	NA	6.0785106
1044	7	149523584	149523584	C	T	exonic	SSPO	NA	nonsynonymous SNV	SSPO:NM_198455:exon102:c.C14495T:p.P4832L	ncRNA_exonic	ENSG00000197558	NA	NA	NA	Score=309;Name=lod=24	NA	7q36.1	NA	NA	NA	NA	rs62492839	0.15	0.15	0.137	0.129393	0.1362	0.245	0.1268	0.0635	0.0941	0.13	0.23	0.12	0.1	0.1456	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.276459	NA	0	0.140797	0.078241	NA	0.167	NA	6.077403
1044	9	38615698	38615698	C	T	exonic	ANKRD18A	NA	nonsynonymous SNV	ANKRD18A:NM_147195:exon3:c.G388A:p.E130K	exonic	ENSG00000180071	NA	nonsynonymous SNV	ENSG00000180071:ENST00000399703:exon3:c.G388A:p.E130K	NA	NA	9p13.1	NA	NA	NA	NA	rs1832313	0.46	0.46	0.395	0.421725	0.4264	0.5109	0.4265	0.4539	0.2781	0.41	0.49	0.46	0.49	0.4221	0.52	1	T	0.0	B	0.0	B	.	.	1.000	P	.	.	0.1	T	-0.951	T	0.000	T	0.014	-1.439	0.02	0.224	-0.357	0.393	5.924	-1.439439	NA	0.68	0.407605	0.447977	NA	0.442	NA	6.0772284
1044	12	122186268	122186268	C	T	exonic	TMEM120B	NA	synonymous SNV	TMEM120B:NM_001080825:exon3:c.C225T:p.L75L	exonic	ENSG00000188735	NA	synonymous SNV	ENSG00000188735:ENST00000541467:exon2:c.C162T:p.L54L,ENSG00000188735:ENST00000342607:exon3:c.C225T:p.L75L,ENSG00000188735:ENST00000449592:exon3:c.C225T:p.L75L	NA	NA	12q24.31	NA	Name=Pol2	Name=7	NA	rs28651018	0.47	0.47	0.447	0.426518	0.5487	0.5188	0.4496	0.2103	0.4816	0.56	0.54	0.48	0.23	0.4959	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.613467	NA	NA	0.546178	0.258547	NA	0.348	NA	6.0758886
1044	4	169098914	169098914	A	G	exonic	ANXA10	NA	synonymous SNV	ANXA10:NM_007193:exon7:c.A504G:p.T168T	exonic	ENSG00000109511	NA	synonymous SNV	ENSG00000109511:ENST00000359299:exon7:c.A504G:p.T168T	NA	NA	4q32.3	NA	Name=MafK_(ab50322)	NA	NA	rs477897	0.14	0.14	0.119	0.114816	0.2256	0.0476	0.1326	0.1067	0.0685	0.2	0.05	0.15	0.12	0.1548	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.086961	NA	NA	0.210814	0.115751	NA	0.101	NA	6.0754526
1044	15	41146880	41146880	T	C	exonic	SPINT1	NA	synonymous SNV	SPINT1:NM_001032367:exon7:c.T1110C:p.S370S,SPINT1:NM_003710:exon8:c.T1110C:p.S370S,SPINT1:NM_181642:exon8:c.T1158C:p.S386S	exonic	ENSG00000166145	NA	synonymous SNV	ENSG00000166145:ENST00000564375:exon4:c.T459C:p.S153S,ENSG00000166145:ENST00000568580:exon6:c.T1011C:p.S337S,ENSG00000166145:ENST00000431806:exon7:c.T1110C:p.S370S,ENSG00000166145:ENST00000344051:exon8:c.T1158C:p.S386S,ENSG00000166145:ENST00000562057:exon8:c.T1110C:p.S370S	Score=385;Name=lod=49	NA	15q15.1	NA	NA	NA	NA	rs8028552	0.26	0.26	0.267	0.278754	0.1889	0.1706	0.1614	0.5787	0.1605	0.19	0.19	0.14	0.51	0.2016	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.36811	1.36811	NA	0.20093	0.503631	NA	0.341	NA	6.0752366
1045	4	77675505	77675505	C	T	exonic	SHROOM3	NA	nonsynonymous SNV	SHROOM3:NM_020859:exon7:c.C3869T:p.P1290L	exonic	ENSG00000138771	NA	nonsynonymous SNV	ENSG00000138771:ENST00000296043:exon7:c.C3869T:p.P1290L	NA	NA	4q21.1	NA	NA	NA	NA	rs3733242	0.51	0.51	0.508	0.529353	0.3907	0.5655	0.4438	0.6604	0.5184	0.39	0.53	0.44	0.73	0.4609	0.73	0.44	T	0.0	B	0.0	B	0.301	N	1.000	P	-0.805	N	2.23	T	-0.985	T	0.000	T	0.018	-0.41	2.086	-1.61	-0.404	-0.675	7.432	-0.409578	NA	0.6	0.407558	0.617794	NA	0.558	NA	6.0741754
1045	12	56827694	56827694	C	G	exonic	TIMELESS	NA	synonymous SNV	TIMELESS:NM_003920:exon3:c.G114C:p.L38L	exonic	ENSG00000111602	NA	synonymous SNV	ENSG00000111602:ENST00000229201:exon3:c.G114C:p.L38L,ENSG00000111602:ENST00000553532:exon3:c.G114C:p.L38L,ENSG00000111602:ENST00000554616:exon3:c.G114C:p.L38L	Score=568;Name=lod=271	NA	12q13.3	Score=761;Name=V$PAX5_02	NA	NA	NA	rs2279665	0.48	0.48	0.531	0.469449	0.5497	0.2619	0.3141	0.6505	0.4663	0.55	0.3	0.38	0.65	0.4985	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.820825	NA	NA	0.545349	0.640717	ID=COSM147549;OCCURENCE=1(stomach)	0.442	NA	6.0731176
1045	5	176733116	176733116	A	G	exonic	PRELID1	NA	synonymous SNV	PRELID1:NM_001271828:exon4:c.A450G:p.R150R,PRELID1:NM_013237:exon4:c.A450G:p.R150R	exonic	ENSG00000169230	NA	synonymous SNV	ENSG00000169230:ENST00000303204:exon4:c.A450G:p.R150R,ENSG00000169230:ENST00000503216:exon4:c.A450G:p.R150R	Score=613;Name=lod=413	NA	5q35.3	NA	NA	Name=9	NA	rs4631	0.78	0.78	0.78	0.77496	0.8817	0.4901	0.7867	0.9334	0.7362	0.88	0.49	0.81	0.93	0.8263	0.93	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.046	T	0.000	T	.	0.204	5.101	1.13	-0.113	0.348	4.558	0.204248	NA	NA	0.885814	0.931911	ID=COSM150020;OCCURENCE=1(stomach)	0.841	NA	6.0728526
1045	9	77407636	77407636	C	T	exonic	TRPM6	NA	synonymous SNV	TRPM6:NM_001177310:exon19:c.G2427A:p.Q809Q,TRPM6:NM_001177311:exon19:c.G2427A:p.Q809Q,TRPM6:NM_017662:exon19:c.G2442A:p.Q814Q	exonic	ENSG00000119121	NA	synonymous SNV	ENSG00000119121:ENST00000360774:exon19:c.G2442A:p.Q814Q,ENSG00000119121:ENST00000361255:exon19:c.G2427A:p.Q809Q,ENSG00000119121:ENST00000376864:exon19:c.G2442A:p.Q814Q,ENSG00000119121:ENST00000449912:exon19:c.G2427A:p.Q809Q,ENSG00000119121:ENST00000451710:exon19:c.G2442A:p.Q814Q	NA	NA	9q21.13	Score=817;Name=V$POU3F2_01	NA	NA	NA	rs4145894	0.24	0.24	0.225	0.268371	0.1769	0.5149	0.3919	0.0144	0.364	0.17	0.48	0.33	0.02	0.235	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.243172	NA	NA	0.182674	0.042215	NA	0.275	NA	6.0720926
1045	11	1606129	1606129	A	C	exonic	KRTAP5-1	NA	synonymous SNV	KRTAP5-1:NM_001005922:exon1:c.T351G:p.G117G	exonic	ENSG00000205869	NA	synonymous SNV	ENSG00000205869:ENST00000382171:exon1:c.T351G:p.G117G	Score=349;Name=lod=35	NA	11p15.5	NA	NA	NA	NA	rs76191756	0.49	0.49	0.343	0.538538	0.5626	0.4732	0.5173	0.59	0.5266	0.51	0.47	0.49	0.51	0.0325	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.294808	NA	NA	NA	NA	NA	0.014	NA	6.0715666
1045	13	20356998	20356998	A	G	intronic	PSPC1	NA	NA	NA	UTR5	ENSG00000121390	ENST00000471658:c.-101T>C,ENST00000492741:c.-101T>C,ENST00000338910:c.-101T>C	NA	NA	NA	NA	13q12.11	NA	Name=Oct-2,Max,ELF1_(SC-631),TAF7_(SQ-8),YY1_(C-20),NRSF,Pol2,Pol2(phosphoS2),POU2F2,TAF1,TBP,c-Myc,NFKB,HEY1,Sin3Ak-20,HA-E2F1,Pol2-4H8,YY1	Name=148	NA	rs17086752	0.08	0.08	0.064	0.0816693	0.0954	0.0804	0.0692	0.1036	0.0481	0.08	0.06	0.06	0.1	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.319757	NA	NA	NA	NA	NA	0.159	NA	6.0712667
1045	2	74746322	74746322	A	T	exonic	DQX1	NA	synonymous SNV	DQX1:NM_133637:exon11:c.T1842A:p.L614L	exonic	ENSG00000144045	NA	synonymous SNV	ENSG00000144045:ENST00000393951:exon11:c.T1842A:p.L614L,ENSG00000144045:ENST00000404568:exon11:c.T1842A:p.L614L	Score=558;Name=lod=247	NA	2p13.1	NA	NA	NA	NA	rs6546909	0.49	0.49	0.497	0.523163	0.16	0.8185	0.3213	0.8101	0.3476	0.15	0.82	0.27	0.8	0.2819	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.345332	NA	NA	0.153953	0.693827	NA	0.428	NA	6.0708136
1045	2	128388790	128388790	G	A	exonic	MYO7B	NA	synonymous SNV	MYO7B:NM_001080527:exon36:c.G4869A:p.E1623E	exonic	ENSG00000169994	NA	synonymous SNV	ENSG00000169994:ENST00000409090:exon12:c.G1428A:p.E476E,ENSG00000169994:ENST00000409816:exon35:c.G4869A:p.E1623E,ENSG00000169994:ENST00000389524:exon36:c.G4869A:p.E1623E,ENSG00000169994:ENST00000428314:exon36:c.G4869A:p.E1623E	Score=329;Name=lod=29	NA	2q14.3	NA	NA	NA	NA	rs13025791	0.14	0.14	0.12	0.168131	0.2018	0.1349	0.1239	0.0499	0.3589	0.2	0.15	0.13	0.05	0.2085	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.890913	NA	NA	0.186879	0.074463	ID=COSM441095,COSM441096;OCCURENCE=1(breast)	0.109	NA	6.0694876
1045	15	64011104	64011104	T	C	intronic	HERC1	NA	NA	NA	intronic	ENSG00000103657	NA	NA	NA	Score=696;Name=lod=898	NA	15q22.31	NA	Name=CEBPB,GR,Mxi1_(bHLH),BRCA1_(C-1863),p300_(N-15),TBP,STAT3,RFX5_(N-494),c-Fos,c-Jun,JunD	Name=98	NA	rs7176133	0.21	0.21	0.217	0.19349	0.341	0.005	0.1801	0.1778	0.2669	0.37	0.0035	0.22	0.2	0.2729	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.179925	NA	NA	0.317505	0.197019	NA	0.21	NA	6.068595
1045	3	184039666	184039666	A	G	exonic	EIF4G1	NA	nonsynonymous SNV	EIF4G1:NM_004953:exon3:c.A706G:p.M236V,EIF4G1:NM_198242:exon6:c.A802G:p.M268V,EIF4G1:NM_198244:exon7:c.A1033G:p.M345V,EIF4G1:NM_182917:exon9:c.A1294G:p.M432V,EIF4G1:NM_001194947:exon10:c.A1315G:p.M439V,EIF4G1:NM_198241:exon10:c.A1294G:p.M432V,EIF4G1:NM_001194946:exon11:c.A1315G:p.M439V	exonic	ENSG00000114867	NA	nonsynonymous SNV	ENSG00000114867:ENST00000434061:exon3:c.A706G:p.M236V,ENSG00000114867:ENST00000435046:exon3:c.A706G:p.M236V,ENSG00000114867:ENST00000441154:exon4:c.A802G:p.M268V,ENSG00000114867:ENST00000457456:exon4:c.A706G:p.M236V,ENSG00000114867:ENST00000444861:exon5:c.A802G:p.M268V,ENSG00000114867:ENST00000350481:exon6:c.A802G:p.M268V,ENSG00000114867:ENST00000392537:exon7:c.A1033G:p.M345V,ENSG00000114867:ENST00000411531:exon7:c.A1174G:p.M392V,ENSG00000114867:ENST00000427845:exon7:c.A1033G:p.M345V,ENSG00000114867:ENST00000319274:exon9:c.A1294G:p.M432V,ENSG00000114867:ENST00000342981:exon9:c.A1294G:p.M432V,ENSG00000114867:ENST00000424196:exon9:c.A1315G:p.M439V,ENSG00000114867:ENST00000426123:exon9:c.A1117G:p.M373V,ENSG00000114867:ENST00000450424:exon9:c.A1294G:p.M432V,ENSG00000114867:ENST00000346169:exon10:c.A1294G:p.M432V,ENSG00000114867:ENST00000352767:exon10:c.A1315G:p.M439V,ENSG00000114867:ENST00000414031:exon10:c.A1174G:p.M392V,ENSG00000114867:ENST00000421110:exon10:c.A1315G:p.M439V,ENSG00000114867:ENST00000382330:exon11:c.A1315G:p.M439V	NA	NA	3q27.1	NA	NA	NA	NA	rs2178403	0.78	0.78	0.801	0.782348	0.7525	0.6528	0.7968	0.9834	0.6646	0.76	0.65	0.78	0.97	0.7554	0.97	0.36	T	0.0	B	0.0	B	0.110	N	1.000	P	-0.69	N	1.64	T	-0.946	T	0.000	T	0.172	-3.351	0.001	2.77	0.310	0.724	2.972	-3.351449	NA	0.38	0.757907	0.94394	NA	0.855	NA	6.0675264
1045	4	69094507	69094507	T	A	exonic	TMPRSS11B	NA	nonsynonymous SNV	TMPRSS11B:NM_182502:exon9:c.A1042T:p.T348S	exonic	ENSG00000185873	NA	nonsynonymous SNV	ENSG00000185873:ENST00000332644:exon9:c.A1042T:p.T348S	NA	NA	4q13.2	NA	NA	NA	NA	rs2319797	0.72	0.72	0.701	0.71845	0.7306	0.9901	0.6023	0.4297	0.8988	0.73	0.99	0.65	0.42	0.7564	0.99	0.16	T	0.316	B	0.076	B	0.329	N	1.000	P	-0.175	N	-3.04	D	-0.995	T	0.000	T	0.078	-0.248	2.807	0.489	0.362	-0.054	2.672	-0.24795	NA	0.89	0.77907	0.522923	NA	0.696	NA	6.0672634
1045	10	99219885	99219885	G	A	exonic	MMS19	NA	synonymous SNV	MMS19:NM_022362:exon26:c.C2574T:p.A858A	exonic	ENSG00000155229	NA	synonymous SNV	ENSG00000155229:ENST00000327238:exon24:c.C2280T:p.A760A,ENSG00000155229:ENST00000355839:exon25:c.C2445T:p.A815A,ENSG00000155229:ENST00000438925:exon26:c.C2574T:p.A858A,ENSG00000155229:ENST00000370782:exon27:c.C2574T:p.A858A	NA	NA	10q24.1	NA	NA	NA	NA	rs2152092	0.51	0.51	0.502	0.52516	0.5189	0.5863	0.5548	0.4153	0.5961	0.52	0.59	0.52	0.41	0.537	0.59	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.920	T	0.000	T	.	0.795	8.185	-5.96	-0.885	-0.942	2.905	0.794666	NA	NA	0.543605	0.422606	NA	0.326	NA	6.0671616
1045	20	37601243	37601243	A	G	exonic	DHX35	NA	synonymous SNV	DHX35:NM_021931:exon3:c.A216G:p.T72T	exonic	ENSG00000101452	NA	synonymous SNV	ENSG00000101452:ENST00000252011:exon3:c.A216G:p.T72T,ENSG00000101452:ENST00000373325:exon3:c.A216G:p.T72T,ENSG00000101452:ENST00000484417:exon3:c.A216G:p.T72T	Score=620;Name=lod=442	NA	20q12	NA	NA	NA	NA	rs16987712	0.17	0.17	0.152	0.174521	0.2137	0.1319	0.1499	0.1558	0.2209	0.22	0.12	0.15	0.16	0.1841	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.105278	NA	NA	0.20186	0.169315	NA	0.167	NA	6.0670066
1045	12	49110582	49110582	C	G	UTR5	CCNT1	NM_001240:c.-124G>C,NM_001277842:c.-124G>C	NA	NA	UTR5	ENSG00000129315	ENST00000261900:c.-124G>C	NA	NA	NA	NA	12q13.12	NA	Name=ELF1_(SC-631),BAF170,GTF2F1_(RAP-74),p300,USF2,GABP,TAF1,GATA-1,TR4,IRF4_(M-17),eGFP-JunD,BCLAF1_(M33-P5B11),TAF7_(SQ-8),TCF4,Pol2(phosphoS2),SP1,NRSF,PU.1,ATF3,Mxi1_(bHLH),Pol2,SIX5,SRF,SETDB1,PAX5-C20,NFKB,HEY1,AP-2gamma,STAT2,c-Myc,IRF1,TBP,Nrf1,THAP1_(SC-98174),ELK4,FOXA1_(C-20),AP-2alpha,Pol2(b),Pol2-4H8,ZNF263,Sin3Ak-20,HA-E2F1,Egr-1,NANOG_(SC-33759),RFX5_(N-494)	Name=148	NA	rs2291728	0.42	0.42	0.387	0.433506	0.2664	0.7748	0.4337	0.2383	0.5174	0.29	0.75	0.43	0.26	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.408122	1.408122	NA	NA	NA	NA	0.29	NA	6.0669334
1045	8	120575184	120575184	G	A	exonic	ENPP2	NA	synonymous SNV	ENPP2:NM_001040092:exon24:c.C2334T:p.F778F,ENPP2:NM_001130863:exon25:c.C2409T:p.F803F,ENPP2:NM_006209:exon25:c.C2490T:p.F830F	exonic	ENSG00000136960	NA	synonymous SNV	ENSG00000136960:ENST00000522167:exon13:c.C1239T:p.F413F,ENSG00000136960:ENST00000075322:exon24:c.C2334T:p.F778F,ENSG00000136960:ENST00000259486:exon25:c.C2490T:p.F830F,ENSG00000136960:ENST00000427067:exon25:c.C2397T:p.F799F,ENSG00000136960:ENST00000522826:exon25:c.C2409T:p.F803F	Score=554;Name=lod=239	NA	8q24.12	NA	NA	NA	NA	rs1058913	0.11	0.11	0.087	0.095647	0.1948	0.0387	0.1326	0.0234	0.1237	0.19	0.04	0.16	0.02	0.1731	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.296779	1.296779	NA	0.232093	0.066273	NA	0.051	NA	6.0666736
1045	15	56959028	56959028	C	T	exonic	ZNF280D	NA	nonsynonymous SNV	ZNF280D:NM_001002843:exon14:c.G1663A:p.V555I,ZNF280D:NM_017661:exon15:c.G1702A:p.V568I	exonic	ENSG00000137871	NA	nonsynonymous SNV	ENSG00000137871:ENST00000558067:exon6:c.G814A:p.V272I,ENSG00000137871:ENST00000396245:exon14:c.G814A:p.V272I,ENSG00000137871:ENST00000559237:exon14:c.G1663A:p.V555I,ENSG00000137871:ENST00000560002:exon14:c.G1702A:p.V568I,ENSG00000137871:ENST00000267807:exon15:c.G1702A:p.V568I,ENSG00000137871:ENST00000559000:exon20:c.G1663A:p.V555I	NA	NA	15q21.3	NA	NA	NA	NA	rs28620278	0.5	0.5	0.505	0.527157	0.4066	0.3829	0.6225	0.7141	0.4796	0.38	0.39	0.59	0.75	0.4554	0.75	0.49	T	0.002	B	0.001	B	.	.	1.000	P	0.55	N	4.5	T	-1.089	T	0.000	T	0.017	-0.568	1.441	-0.931	-0.282	-0.286	6.768	-0.567698	NA	0.35	0.405522	0.63937	NA	0.551	NA	6.0658114
1045	15	101109818	101109818	G	A	exonic	LINS	NA	synonymous SNV	LINS:NM_001040616:exon7:c.C1899T:p.D633D	exonic	ENSG00000140471	NA	synonymous SNV	ENSG00000140471:ENST00000314742:exon7:c.C1899T:p.D633D	Score=443;Name=lod=84	NA	15q26.3	NA	NA	Name=12	NA	rs12460	0.47	0.47	0.476	0.45627	0.5378	0.4911	0.4337	0.3661	0.4744	0.55	0.48	0.46	0.36	0.5056	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.22343	NA	NA	0.557791	0.393554	NA	0.471	NA	6.0654756
1046	6	33740325	33740325	G	C	UTR3	LEMD2	NM_181336:c.*80C>G,NM_001143944:c.*80C>G	NA	NA	UTR3	ENSG00000161904	ENST00000293760:c.*80C>G,ENST00000506578:c.*80C>G,ENST00000421671:c.*853C>G,ENST00000508327:c.*80C>G	NA	NA	NA	NA	6p21.31	NA	Name=ERalpha_a,GATA-2,c-Fos	Name=56	NA	rs11755593	0.21	0.21	0.192	0.20008	0.2694	0.12	0.3444	0.1369	0.1943	0.26	0.13	0.36	0.12	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.850367	NA	NA	NA	NA	NA	0.116	NA	6.0639334
1046	11	12183846	12183846	C	T	exonic	MICAL2	NA	synonymous SNV	MICAL2:NM_014632:exon3:c.C144T:p.N48N	exonic	ENSG00000133816	NA	synonymous SNV	ENSG00000133816:ENST00000379612:exon1:c.C144T:p.N48N,ENSG00000133816:ENST00000533389:exon1:c.C144T:p.N48N,ENSG00000133816:ENST00000342902:exon2:c.C144T:p.N48N,ENSG00000133816:ENST00000524685:exon2:c.C144T:p.N48N,ENSG00000133816:ENST00000525119:exon2:c.C144T:p.N48N,ENSG00000133816:ENST00000527546:exon2:c.C144T:p.N48N,ENSG00000133816:ENST00000532179:exon2:c.C144T:p.N48N,ENSG00000133816:ENST00000532420:exon2:c.C144T:p.N48N,ENSG00000133816:ENST00000256194:exon3:c.C144T:p.N48N,ENSG00000133816:ENST00000526065:exon3:c.C144T:p.N48N,ENSG00000133816:ENST00000537344:exon3:c.C144T:p.N48N	Score=666;Name=lod=680	NA	11p15.3	NA	NA	NA	NA	rs28625145	0.18	0.18	0.148	0.176717	0.2107	0.1528	0.2118	0.1702	0.1503	0.2	0.14	0.21	0.19	0.1951	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.248668	NA	NA	0.197136	0.17174	NA	0.145	NA	6.0637306
1046	20	34243017	34243017	C	T	exonic	RBM12	NA	synonymous SNV	RBM12:NM_001198840:exon2:c.G228A:p.K76K,RBM12:NM_001198838:exon3:c.G228A:p.K76K,RBM12:NM_006047:exon3:c.G228A:p.K76K,RBM12:NM_152838:exon3:c.G228A:p.K76K	exonic	ENSG00000244462	NA	synonymous SNV	ENSG00000244462:ENST00000359646:exon2:c.G228A:p.K76K,ENSG00000244462:ENST00000374104:exon3:c.G228A:p.K76K,ENSG00000244462:ENST00000374114:exon3:c.G228A:p.K76K,ENSG00000244462:ENST00000424458:exon3:c.G228A:p.K76K,ENSG00000244462:ENST00000431148:exon3:c.G228A:p.K76K,ENSG00000244462:ENST00000435161:exon3:c.G228A:p.K76K	Score=797;Name=lod=2322	NA	20q11.22	NA	NA	NA	NA	rs6121015	0.22	0.22	0.227	0.271166	0.1899	0.1339	0.1844	0.4228	0.3528	0.19	0.11	0.22	0.4	0.2229	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.536146	NA	NA	0.190698	0.393327	NA	0.246	NA	6.0631686
1046	2	105889349	105889349	G	A	exonic	TGFBRAP1	NA	synonymous SNV	TGFBRAP1:NM_001142621:exon10:c.C1935T:p.L645L,TGFBRAP1:NM_004257:exon10:c.C1935T:p.L645L	exonic	ENSG00000135966	NA	synonymous SNV	ENSG00000135966:ENST00000258449:exon9:c.C1935T:p.L645L,ENSG00000135966:ENST00000393359:exon10:c.C1935T:p.L645L	Score=383;Name=lod=48	NA	2q12.1	NA	NA	NA	NA	rs11676273	0.14	0.14	0.109	0.116214	0.2207	0.0804	0.2219	0.0091	0.1155	0.23	0.07	0.23	0.02	0.1768	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.442276	NA	NA	0.206744	0.04108	NA	0.116	NA	6.0624226
1046	2	220502367	220502367	A	C	exonic	SLC4A3	NA	nonsynonymous SNV	SLC4A3:NM_005070:exon17:c.A2600C:p.D867A,SLC4A3:NM_201574:exon17:c.A2681C:p.D894A	exonic	ENSG00000114923	NA	nonsynonymous SNV	ENSG00000114923:ENST00000273063:exon17:c.A2681C:p.D894A,ENSG00000114923:ENST00000317151:exon17:c.A2600C:p.D867A,ENSG00000114923:ENST00000358055:exon17:c.A2600C:p.D867A,ENSG00000114923:ENST00000373760:exon17:c.A2600C:p.D867A,ENSG00000114923:ENST00000373762:exon17:c.A2681C:p.D894A	NA	NA	2q35	NA	NA	NA	NA	rs635311	0.72	0.72	0.674	0.677516	0.7624	0.8065	0.7925	0.466	0.6616	0.78	0.84	0.76	0.45	0.7442	0.84	0.18	T	0.0	B	0.0	B	0.000	N	1.000	P	-0.66	N	-1.12	T	-0.924	T	0.000	T	0.093	1.121	9.57	-2.34	-0.231	0.627	2.111	1.120745	NA	0.17	0.764419	0.504312	NA	0.572	NA	6.0623144
1046	2	135711516	135711516	C	T	exonic	CCNT2	NA	synonymous SNV	CCNT2:NM_001241:exon9:c.C1491T:p.D497D,CCNT2:NM_058241:exon9:c.C1491T:p.D497D	exonic	ENSG00000082258	NA	synonymous SNV	ENSG00000082258:ENST00000264157:exon9:c.C1491T:p.D497D,ENSG00000082258:ENST00000295238:exon9:c.C1491T:p.D497D,ENSG00000082258:ENST00000537343:exon10:c.C966T:p.D322D	Score=584;Name=lod=315	NA	2q21.3	NA	Name=PU.1	NA	NA	rs3814355	0.72	0.72	0.733	0.732827	0.5457	0.877	0.6427	0.7693	0.7914	0.53	0.9	0.66	0.83	0.5894	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.62215	NA	NA	0.47	0.713799	NA	0.565	NA	6.0615666
1046	1	32084904	32084904	C	T	exonic	HCRTR1	NA	synonymous SNV	HCRTR1:NM_001525:exon3:c.C111T:p.R37R	exonic	ENSG00000121764	NA	synonymous SNV	ENSG00000121764:ENST00000373705:exon1:c.C111T:p.R37R,ENSG00000121764:ENST00000373706:exon1:c.C111T:p.R37R,ENSG00000121764:ENST00000403528:exon3:c.C111T:p.R37R	Score=616;Name=lod=425	NA	1p35.2	Score=896;Name=V$E2F_02	NA	NA	NA	rs1056526	0.35	0.35	0.31	0.352835	0.5636	0.2371	0.4654	0.0794	0.545	0.54	0.26	0.48	0.08	0.4903	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.132015	NA	NA	0.552326	0.16296	NA	0.413	NA	6.0604406
1046	17	56738919	56738919	G	A	intronic	TEX14	NA	NA	NA	ncRNA_exonic	ENSG00000266826	NA	NA	NA	Score=265;Name=lod=16	NA	17q22	NA	NA	Name=2	NA	rs4340382	0.18	0.18	0.177	0.234026	0.0726	0.3036	0.0648	0.3359	0.3108	0.08	0.27	0.07	0.33	0.1373	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.781743	NA	NA	0.063263	0.258467	NA	0.13	NA	6.0601703
1046	11	82905679	82905679	C	T	UTR5	ANKRD42	NM_182603:c.-34C>T	NA	NA	UTR5	ENSG00000137494	ENST00000393389:c.-34C>T,ENST00000260047:c.-34C>T,ENST00000526731:c.-34C>T,ENST00000531895:c.-34C>T,ENST00000393392:c.-34C>T	NA	NA	NA	NA	11q14.1	NA	Name=Pol2,PU.1,GABP,TAF1,BAF155,CEBPB,Max,ELF1_(SC-631),Sin3Ak-20,ZNF263,Ini1,YY1,TBP,c-Myc	Name=133	NA	rs11233519	0.13	0.13	0.158	0.163938	0.0805	0.0516	0.0865	0.382	0.1258	0.07	0.05	0.09	0.35	0.1067	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.465626	1.465626	NA	0.086279	0.310259	NA	0.196	NA	6.0598544
1046	17	65104666	65104666	T	G	exonic	HELZ	NA	synonymous SNV	HELZ:NM_014877:exon30:c.A4666C:p.R1556R	exonic	ENSG00000198265	NA	synonymous SNV	ENSG00000198265:ENST00000358691:exon30:c.A4666C:p.R1556R,ENSG00000198265:ENST00000580168:exon30:c.A4669C:p.R1557R	Score=526;Name=lod=183	NA	17q24.2	NA	NA	Name=4	NA	rs11657929	0.67	0.67	0.656	0.71865	0.5189	0.881	0.6239	0.7761	0.7464	0.51	0.88	0.6	0.74	0.6049	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.076849	NA	NA	0.483235	0.724417	NA	0.652	NA	6.0596316
1046	3	124646594	124646594	A	G	exonic	MUC13	NA	nonsynonymous SNV	MUC13:NM_033049:exon2:c.T296C:p.I99T	exonic	ENSG00000173702	NA	nonsynonymous SNV	ENSG00000173702:ENST00000311075:exon2:c.T296C:p.I99T	NA	NA	3q21.2	NA	NA	NA	NA	rs4679392	0.38	0.38	0.367	0.39377	0.4294	0.2212	0.4496	0.4251	0.453	0.43	0.22	0.47	0.41	0.4221	0.47	0.52	T	0.0	B	0.0	B	.	.	1.000	P	-0.55	N	2.62	T	-0.935	T	0.000	T	0.017	-0.404	2.109	1.89	0.230	0.394	4.160	-0.404188	NA	0.33	0.422791	0.453473	ID=COSM149459;OCCURENCE=1(stomach)	0.413	NA	6.0590424
1046	5	54420799	54420799	A	C	exonic	CDC20B	NA	synonymous SNV	CDC20B:NM_001145734:exon9:c.T1047G:p.V349V,CDC20B:NM_001170402:exon9:c.T1047G:p.V349V,CDC20B:NM_152623:exon9:c.T1047G:p.V349V	exonic	ENSG00000164287	NA	synonymous SNV	ENSG00000164287:ENST00000296733:exon9:c.T1047G:p.V349V,ENSG00000164287:ENST00000322374:exon9:c.T1047G:p.V349V,ENSG00000164287:ENST00000381375:exon9:c.T1047G:p.V349V	Score=349;Name=lod=35	NA	5q11.2	NA	NA	NA	NA	rs382402	0.16	0.16	0.111	0.171326	0.2147	0.1915	0.147	0.0424	0.2975	0.22	0.16	0.16	0.05	0.2022	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.058083	NA	NA	0.190814	0.065365	ID=COSM149837;OCCURENCE=1(stomach)	0.094	NA	6.0589526
1046	9	103054951	103054951	T	C	exonic	INVS	NA	synonymous SNV	INVS:NM_014425:exon14:c.T2412C:p.S804S	exonic	ENSG00000119509	NA	synonymous SNV	ENSG00000119509:ENST00000262457:exon14:c.T2412C:p.S804S,ENSG00000119509:ENST00000541287:exon15:c.T2124C:p.S708S	Score=385;Name=lod=49	NA	9q31.1	NA	NA	NA	NA	rs2787374	0.44	0.44	0.431	0.407348	0.5726	0.1577	0.3516	0.615	0.2536	0.58	0.13	0.4	0.62	0.4676	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.454462	1.454462	NA	0.568023	0.585338	NA	0.449	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000081629.1;CLNDSDB=.;CLNDSDBID=.	6.0584436
1046	7	142480067	142480067	C	T	ncRNA_exonic	PRSS3P2	NA	NA	NA	ncRNA_exonic	ENSG00000250606	NA	NA	NA	Score=531;Name=lod=191	NA	7q34	NA	NA	Name=14	NA	rs201659809	NA	NA	0.143	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.6095	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.338097	NA	1	NA	NA	NA	NA	NA	6.0571666
1046	2	173686798	173686798	A	G	intronic	RAPGEF4	NA	NA	NA	intronic	ENSG00000091428	NA	NA	NA	Score=397;Name=lod=55	NA	2q31.1	NA	Name=p300	Name=5	NA	rs2258175	0.5	0.5	0.46	0.491014	0.4742	0.5605	0.4813	0.4402	0.5123	0.49	0.58	0.45	0.46	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.108093	NA	NA	0.469516	0.450867	NA	0.514	NA	6.056284
1046	11	5364742	5364742	C	T	exonic	OR51B5	NA	nonsynonymous SNV	OR51B5:NM_001005567:exon5:c.G13A:p.G5S	exonic	ENSG00000242180	NA	nonsynonymous SNV	ENSG00000242180:ENST00000300773:exon1:c.G13A:p.G5S	NA	NA	11p15.4	NA	NA	NA	NA	rs11036913	0.3	0.3	0.273	0.297724	0.4304	0.2391	0.438	0.0847	0.41	0.42	0.26	0.41	0.09	0.4003	0.45	1	T	0.001	B	0.001	B	0.792	N	1.000	P	-1.22	N	5.62	T	-0.996	T	0.000	T	0.045	0.285	5.541	0.753	0.005	-0.508	7.448	0.284717	NA	0.47	0.447246	0.152214	NA	0.275	NA	6.0553874
1047	2	165987772	165987772	T	G	exonic	SCN3A	NA	synonymous SNV	SCN3A:NM_001081676:exon16:c.A2400C:p.V800V,SCN3A:NM_001081677:exon16:c.A2400C:p.V800V,SCN3A:NM_006922:exon16:c.A2547C:p.V849V	exonic	ENSG00000153253	NA	synonymous SNV	ENSG00000153253:ENST00000440431:exon15:c.A2400C:p.V800V,ENSG00000153253:ENST00000283254:exon16:c.A2547C:p.V849V,ENSG00000153253:ENST00000360093:exon16:c.A2547C:p.V849V,ENSG00000153253:ENST00000409101:exon16:c.A2400C:p.V800V	Score=458;Name=lod=97	NA	2q24.3	NA	NA	NA	NA	rs62174900	0.19	0.19	0.155	0.181709	0.1968	0.2728	0.1787	0.0234	0.2883	0.19	0.29	0.22	0.03	0.2018	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.075427	NA	NA	0.213372	0.064458	NA	0.072	NA	6.0546946
1047	1	160062727	160062727	A	G	exonic	IGSF8	NA	synonymous SNV	IGSF8:NM_052868:exon4:c.T1299C:p.H433H,IGSF8:NM_001206665:exon5:c.T1299C:p.H433H	exonic	ENSG00000162729	NA	synonymous SNV	ENSG00000162729:ENST00000314485:exon4:c.T1299C:p.H433H,ENSG00000162729:ENST00000368086:exon4:c.T1299C:p.H433H	Score=459;Name=lod=98	NA	1q23.2	NA	NA	NA	NA	rs2295621	0.17	0.17	0.131	0.159744	0.1879	0.2232	0.2522	0.0287	0.1769	0.19	0.21	0.22	0.05	0.213	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.301134	NA	NA	0.212326	0.055379	NA	0.283	NA	6.0534406
1047	1	169529973	169529973	C	T	exonic	F5	NA	synonymous SNV	F5:NM_000130:exon4:c.G405A:p.A135A	exonic	ENSG00000198734	NA	synonymous SNV	ENSG00000198734:ENST00000367796:exon4:c.G405A:p.A135A,ENSG00000198734:ENST00000367797:exon4:c.G405A:p.A135A	NA	NA	1q24.2	Score=729;Name=V$SEF1_C	NA	NA	NA	rs6029	0.4	0.4	0.407	0.398762	0.1819	0.6647	0.2882	0.584	0.1759	0.17	0.64	0.28	0.56	0.256	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.427727	NA	NA	0.176395	0.51044	NA	0.377	NA	6.0523716
1047	17	6690829	6690829	G	A	UTR3	FBXO39	NM_153230:c.*82G>A	NA	NA	UTR3	ENSG00000177294	ENST00000321535:c.*82G>A	NA	NA	NA	NA	17p13.1	NA	Name=p300	Name=23	NA	rs4239266	0.4	0.4	0.384	0.386581	0.2813	0.5813	0.3732	0.3533	0.3487	0.27	0.62	0.36	0.38	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.390314	NA	NA	NA	NA	NA	0.341	NA	6.0520334
1047	7	16666741	16666741	T	G	exonic	ANKMY2	NA	synonymous SNV	ANKMY2:NM_020319:exon3:c.A195C:p.L65L	exonic	ENSG00000106524	NA	synonymous SNV	ENSG00000106524:ENST00000306999:exon3:c.A195C:p.L65L,ENSG00000106524:ENST00000447802:exon3:c.A195C:p.L65L	NA	NA	7p21.1	Score=742;Name=V$TCF11MAFG_01	NA	NA	NA	rs11532682	0.18	0.18	0.165	0.139976	0.2187	0.1438	0.2075	0.093	0.0706	0.22	0.16	0.24	0.11	0.1824	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.855544	NA	NA	0.213953	0.094644	NA	0.101	NA	6.0516136
1047	18	166819	166819	T	C	exonic	USP14	NA	synonymous SNV	USP14:NM_001037334:exon3:c.T195C:p.N65N,USP14:NM_005151:exon3:c.T195C:p.N65N	exonic	ENSG00000101557	NA	synonymous SNV	ENSG00000101557:ENST00000261601:exon3:c.T195C:p.N65N,ENSG00000101557:ENST00000582707:exon3:c.T195C:p.N65N	Score=572;Name=lod=281	NA	18p11.32	NA	NA	NA	NA	rs563155	0.14	0.14	0.14	0.154553	0.2117	0.006	0.134	0.174	0.2372	0.21	0.0017	0.15	0.2	0.1809	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.156154	2.156154	NA	0.222558	0.176804	NA	0.116	NA	6.0515086
1047	2	37241050	37241050	G	A	exonic	HEATR5B	NA	synonymous SNV	HEATR5B:NM_019024:exon27:c.C4218T:p.S1406S	exonic	ENSG00000008869	NA	synonymous SNV	ENSG00000008869:ENST00000233099:exon27:c.C4218T:p.S1406S,ENSG00000008869:ENST00000354531:exon27:c.C4218T:p.S1406S	Score=615;Name=lod=423	NA	2p22.2	NA	NA	NA	NA	rs17020125	0.27	0.27	0.267	0.260383	0.1948	0.5288	0.2651	0.0484	0.3344	0.22	0.55	0.23	0.05	0.2357	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.867076	NA	NA	0.184884	0.07626	NA	0.167	NA	6.0512826
1047	2	20202929	20202929	C	T	exonic	MATN3	NA	synonymous SNV	MATN3:NM_002381:exon3:c.G909A:p.T303T	exonic	ENSG00000132031	NA	synonymous SNV	ENSG00000132031:ENST00000407540:exon3:c.G909A:p.T303T	NA	NA	2p24.1	Score=844;Name=V$ARNT_01	NA	NA	NA	rs28452699	0.15	0.15	0.151	0.145966	0.1978	0.0367	0.1974	0.1407	0.1759	0.2	0.05	0.19	0.17	0.2025	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.354892	NA	NA	0.215348	0.142009	NA	0.123	NA	6.0510186
1047	22	50313438	50313438	T	C	exonic	CRELD2	NA	synonymous SNV	CRELD2:NM_001135101:exon3:c.T273C:p.N91N,CRELD2:NM_024324:exon3:c.T273C:p.N91N	exonic	ENSG00000184164	NA	synonymous SNV	ENSG00000184164:ENST00000328268:exon3:c.T273C:p.N91N,ENSG00000184164:ENST00000403427:exon3:c.T273C:p.N91N,ENSG00000184164:ENST00000404488:exon3:c.T273C:p.N91N,ENSG00000184164:ENST00000407217:exon3:c.T273C:p.N91N,ENSG00000184164:ENST00000450207:exon4:c.T273C:p.N91N	Score=501;Name=lod=145	NA	22q13.33	NA	NA	NA	NA	rs9616388	0.22	0.22	0.217	0.2498	0.1978	0.1052	0.1354	0.3994	0.3313	0.21	0.12	0.15	0.4	0.2247	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.006267	NA	NA	0.195581	0.346661	ID=COSM1484322,COSM149317;OCCURENCE=1(breast),1(stomach)	0.341	NA	6.0485856
1047	1	43047057	43047057	A	G	exonic	CCDC30	NA	synonymous SNV	CCDC30:NM_001080850:exon8:c.A1092G:p.E364E	exonic	ENSG00000186409	NA	synonymous SNV	ENSG00000186409:ENST00000390640:exon4:c.A459G:p.E153E,ENSG00000186409:ENST00000340612:exon7:c.A1092G:p.E364E,ENSG00000186409:ENST00000507855:exon7:c.A459G:p.E153E,ENSG00000186409:ENST00000342022:exon8:c.A1092G:p.E364E,ENSG00000186409:ENST00000428554:exon15:c.A1092G:p.E364E,ENSG00000186409:ENST00000477155:exon15:c.A186G:p.E62E	Score=426;Name=lod=72	NA	1p34.2	NA	NA	NA	NA	rs12037518	0.2	0.2	0.21	0.278954	0.1879	0.4395	0.1499	0.1702	0.4458	0.16	0.35	0.14	0.12	0.2318	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.974356	NA	NA	0.198605	0.179755	NA	0.181	NA	6.0483616
1047	9	123170733	123170733	C	G	exonic	CDK5RAP2	NA	nonsynonymous SNV	CDK5RAP2:NM_001272039:exon28:c.G3928C:p.V1310L,CDK5RAP2:NM_001011649:exon31:c.G4618C:p.V1540L,CDK5RAP2:NM_018249:exon31:c.G4618C:p.V1540L	exonic	ENSG00000136861	NA	nonsynonymous SNV	ENSG00000136861:ENST00000425647:exon9:c.G1648C:p.V550L,ENSG00000136861:ENST00000416449:exon16:c.G2800C:p.V934L,ENSG00000136861:ENST00000359309:exon30:c.G4495C:p.V1499L,ENSG00000136861:ENST00000360822:exon30:c.G4522C:p.V1508L,ENSG00000136861:ENST00000349780:exon31:c.G4618C:p.V1540L,ENSG00000136861:ENST00000360190:exon31:c.G4618C:p.V1540L	NA	NA	9q33.2	NA	NA	NA	NA	rs4837768	0.76	0.76	0.717	0.753195	0.7634	0.8591	0.8429	0.562	0.8282	0.76	0.84	0.84	0.6	0.7691	0.84	0.41	T	0.105	B	0.055	B	0.982	N	1.000	P	0.175	N	1.52	T	-1.012	T	0.000	T	0.065	0.382	6.077	-0.555	0.005	-0.083	0.192	0.382491	NA	0.91	0.752674	0.584203	NA	0.783	CLINSIG=non-pathogenic;CLNDBN=Primary_autosomal_recessive_microcephaly_3;CLNREVSTAT=single;CLNACC=RCV000020841.1;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet;CLNDSDBID=NBK9587:C1858108:604804:ORPHA2512	6.0481594
1047	17	8139463	8139463	G	A	exonic	CTC1	NA	synonymous SNV	CTC1:NM_025099:exon6:c.C990T:p.D330D	exonic	ENSG00000178971	NA	synonymous SNV	ENSG00000178971:ENST00000315684:exon6:c.C990T:p.D330D,ENSG00000178971:ENST00000449476:exon6:c.C885T:p.D295D	NA	NA	17p13.1	NA	NA	NA	NA	rs74506939	0.12	0.12	0.109	0.0900559	0.2207	0.0337	0.1196	0.0182	0.09	0.23	0.03	0.15	0.03	0.1669	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.605656	NA	NA	0.231036	0.046227	NA	0.065	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116842.2;CLNDSDB=.;CLNDSDBID=.	6.0480306
1047	20	48259034	48259034	A	G	exonic	B4GALT5	NA	synonymous SNV	B4GALT5:NM_004776:exon5:c.T577C:p.L193L	exonic	ENSG00000158470	NA	synonymous SNV	ENSG00000158470:ENST00000371711:exon5:c.T577C:p.L193L	Score=509;Name=lod=156	NA	20q13.13	NA	NA	Name=9	NA	rs2235855	0.41	0.41	0.413	0.446685	0.5547	0.3948	0.4395	0.267	0.637	0.54	0.36	0.48	0.23	0.5121	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.750924	NA	NA	0.552326	0.330232	NA	0.565	NA	6.0475406
1047	1	169529826	169529826	C	A	exonic	F5	NA	synonymous SNV	F5:NM_000130:exon4:c.G552T:p.S184S	exonic	ENSG00000198734	NA	synonymous SNV	ENSG00000198734:ENST00000546081:exon3:c.G141T:p.S47S,ENSG00000198734:ENST00000367796:exon4:c.G552T:p.S184S,ENSG00000198734:ENST00000367797:exon4:c.G552T:p.S184S	Score=508;Name=lod=155	NA	1q24.2	NA	NA	NA	NA	rs6022	0.41	0.41	0.437	0.417732	0.1819	0.6647	0.2911	0.6543	0.1759	0.17	0.64	0.29	0.62	0.2614	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.629263	NA	NA	0.176395	0.574444	NA	0.399	NA	6.0469716
1047	6	24437458	24437458	T	C	exonic	GPLD1	NA	nonsynonymous SNV	GPLD1:NM_001503:exon21:c.A2080G:p.M694V	exonic	ENSG00000112293	NA	nonsynonymous SNV	ENSG00000112293:ENST00000230036:exon21:c.A2080G:p.M694V	NA	NA	6p22.3	NA	NA	NA	NA	rs1042303	0.33	0.33	0.336	0.30611	0.4364	0.253	0.3386	0.2549	0.273	0.43	0.23	0.35	0.28	0.3875	0.46	0.63	T	0.0	B	0.001	B	0.005	N	0.005	P	0.82	L	-0.15	T	-1.069	T	0.043	T	0.086	-0.061	3.704	0.898	0.068	0.711	4.862	-0.060886	NA	0.86	0.462674	0.285747	NA	0.319	NA	6.0467594
1047	12	55863381	55863381	A	G	exonic	OR6C70	NA	nonsynonymous SNV	OR6C70:NM_001005499:exon1:c.T542C:p.L181P	exonic	ENSG00000184954	NA	nonsynonymous SNV	ENSG00000184954:ENST00000327335:exon1:c.T542C:p.L181P	NA	NA	12q13.2	NA	NA	NA	NA	rs10747756	0.84	0.84	0.854	0.829872	0.7525	0.8929	0.7723	0.972	0.6933	0.74	0.91	0.77	0.97	0.7713	0.97	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-2.81	N	8.99	T	-0.991	T	0.000	T	0.044	-3.374	0.001	3.16	0.481	0.828	7.131	-3.373569	NA	1	0.762907	0.931003	NA	0.884	NA	6.0466264
1047	6	2784571	2784571	G	A	exonic	WRNIP1	NA	synonymous SNV	WRNIP1:NM_020135:exon6:c.G1656A:p.P552P,WRNIP1:NM_130395:exon6:c.G1581A:p.P527P	exonic	ENSG00000124535	NA	synonymous SNV	ENSG00000124535:ENST00000380764:exon5:c.G504A:p.P168P,ENSG00000124535:ENST00000380769:exon6:c.G996A:p.P332P,ENSG00000124535:ENST00000380771:exon6:c.G1581A:p.P527P,ENSG00000124535:ENST00000380773:exon6:c.G1656A:p.P552P	NA	NA	6p25.2	NA	NA	Name=15	NA	rs160703	0.19	0.19	0.16	0.210064	0.1968	0.256	0.2147	0.0968	0.3262	0.2	0.26	0.18	0.09	0.2273	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.993755	NA	NA	0.196395	0.105311	NA	0.152	NA	6.0461716
1047	1	196946775	196946775	T	C	UTR5	CFHR5	NM_030787:c.-20T>C	NA	NA	exonic	ENSG00000134389	NA	nonsynonymous SNV	ENSG00000134389:ENST00000367414:exon1:c.T53C:p.I18T	NA	NA	1q31.3	NA	NA	NA	NA	rs9427662	0.14	0.14	0.158	0.176917	0.0845	NA	0.1081	0.4781	0.0961	0.08	NA	0.09	0.43	0.1108	0.43	0.27	T	.	.	.	.	.	.	1.000	P	.	.	1.5	T	-0.911	T	0.000	T	0.112	0.282	5.526	0.199	0.035	0.028	3.162	0.282056	NA	0	0.092114	0.425783	NA	0.174	NA	6.0459194
1047	1	42915727	42915727	C	G	exonic	ZMYND12	NA	synonymous SNV	ZMYND12:NM_032257:exon2:c.G114C:p.G38G	exonic	ENSG00000066185	NA	synonymous SNV	ENSG00000066185:ENST00000372565:exon2:c.G114C:p.G38G	Score=385;Name=lod=49	NA	1p34.2	NA	NA	NA	NA	rs12047095	0.24	0.24	0.213	0.283147	0.1879	0.4355	0.1571	0.1778	0.456	0.19	0.39	0.16	0.18	0.2358	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.15295	NA	NA	0.197442	0.187699	NA	0.21	NA	6.0455246
1047	4	160277276	160277276	C	T	exonic	RAPGEF2	NA	synonymous SNV	RAPGEF2:NM_014247:exon23:c.C4440T:p.P1480P	exonic	ENSG00000109756	NA	synonymous SNV	ENSG00000109756:ENST00000264431:exon23:c.C4440T:p.P1480P	Score=429;Name=lod=74	NA	4q32.1	Score=781;Name=V$PPARG_03	NA	NA	NA	rs1135004	0.37	0.37	0.319	0.35004	0.5497	0.0982	0.5519	0.2352	0.4162	0.57	0.1	0.57	0.24	0.4918	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.126819	NA	NA	0.579774	0.259644	NA	0.413	NA	6.0453926
1047	7	77469486	77469486	C	T	UTR5	PHTF2	NM_020432:c.-87C>T,NM_001127359:c.-87C>T,NM_001127357:c.-87C>T	NA	NA	UTR5	ENSG00000006576	ENST00000416283:c.-87C>T,ENST00000450574:c.-87C>T	NA	NA	Score=369;Name=lod=42	NA	7q11.23	NA	Name=BRF2	NA	NA	rs17807802	0.19	0.19	0.166	0.190695	0.2883	0.1429	0.2118	0.0666	0.2924	0.29	0.16	0.18	0.07	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.312526	NA	NA	NA	NA	NA	0.196	NA	6.0450334
1048	17	5991344	5991344	C	T	exonic	WSCD1	NA	synonymous SNV	WSCD1:NM_015253:exon3:c.C462T:p.H154H	exonic	ENSG00000179314	NA	synonymous SNV	ENSG00000179314:ENST00000573634:exon2:c.C114T:p.H38H,ENSG00000179314:ENST00000317744:exon3:c.C462T:p.H154H,ENSG00000179314:ENST00000539421:exon3:c.C462T:p.H154H,ENSG00000179314:ENST00000574232:exon3:c.C462T:p.H154H,ENSG00000179314:ENST00000574946:exon3:c.C462T:p.H154H,ENSG00000179314:ENST00000576083:exon3:c.C462T:p.H154H	Score=340;Name=lod=32	NA	17p13.2	Score=761;Name=V$YY1_02	NA	NA	NA	rs2302836	0.52	0.52	0.489	0.526757	0.5338	0.8204	0.5259	0.1611	0.7117	0.54	0.81	0.52	0.15	0.5546	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.67185	NA	NA	0.533372	0.22197	NA	0.457	NA	6.0448946
1048	2	215901774	215901774	C	T	exonic	ABCA12	NA	synonymous SNV	ABCA12:NM_173076:exon8:c.G888A:p.V296V	exonic	ENSG00000144452	NA	synonymous SNV	ENSG00000144452:ENST00000272895:exon8:c.G888A:p.V296V	Score=544;Name=lod=216	NA	2q35	NA	NA	NA	NA	rs17501837	0.26	0.26	0.244	0.223442	0.2058	0.4127	0.2565	0.1354	0.1421	0.2	0.43	0.22	0.17	0.2057	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.356195	NA	NA	0.210465	0.149342	ID=COSM50991;OCCURENCE=1(breast)	0.225	NA	6.0447016
1048	1	227149203	227149203	G	A	exonic	ADCK3	NA	synonymous SNV	ADCK3:NM_020247:exon2:c.G117A:p.A39A	exonic	ENSG00000163050	NA	synonymous SNV	ENSG00000163050:ENST00000366777:exon2:c.G117A:p.A39A,ENSG00000163050:ENST00000366779:exon7:c.G117A:p.A39A	NA	NA	1q42.13	NA	NA	NA	NA	rs11549708	0.11	0.11	0.109	0.0806709	0.2187	0.001	0.111	0.031	0.0665	0.21	0.0017	0.14	0.04	0.1643	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.077596	NA	NA	0.239009	0.055606	NA	0.145	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116234.2;CLNDSDB=.;CLNDSDBID=.	6.0446576
1048	12	81627238	81627238	C	T	exonic	ACSS3	NA	synonymous SNV	ACSS3:NM_024560:exon13:c.C1707T:p.G569G	exonic	ENSG00000111058	NA	synonymous SNV	ENSG00000111058:ENST00000548324:exon8:c.C753T:p.G251G,ENSG00000111058:ENST00000261206:exon13:c.C1704T:p.G568G,ENSG00000111058:ENST00000548058:exon13:c.C1707T:p.G569G	Score=483;Name=lod=122	NA	12q21.31	NA	NA	NA	NA	rs1921038	0.2	0.2	0.202	0.176917	0.2207	0.2321	0.1801	0.1029	0.1728	0.25	0.22	0.2	0.1	0.1899	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.002892	NA	NA	0.21314	0.122333	NA	0.181	NA	6.0429266
1048	7	155530954	155530954	T	C	exonic	RBM33	NA	synonymous SNV	RBM33:NM_053043:exon11:c.T1594C:p.L532L	exonic	ENSG00000184863	NA	synonymous SNV	ENSG00000184863:ENST00000401878:exon11:c.T1594C:p.L532L	NA	NA	7q36.3	Score=796;Name=V$PPARG_03	NA	NA	NA	rs2178428	0.31	0.31	0.305	0.317492	0.1869	0.3125	0.2695	0.5492	0.1779	0.19	0.34	0.28	0.5	0.2443	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.6085	NA	NA	0.193203	0.483181	NA	0.333	NA	6.0422636
1048	16	1591962	1591962	G	A	exonic	TMEM204	NA	synonymous SNV	TMEM204:NM_024600:exon2:c.G321A:p.T107T,TMEM204:NM_001256541:exon3:c.G321A:p.T107T	exonic	ENSG00000131634	NA	synonymous SNV	ENSG00000131634:ENST00000566264:exon2:c.G321A:p.T107T,ENSG00000131634:ENST00000253934:exon3:c.G321A:p.T107T	NA	NA	16p13.3	Score=751;Name=V$HEN1_02	NA	NA	NA	rs2076443	0.28	0.28	0.273	0.30631	0.1918	0.3423	0.1599	0.4228	0.3333	0.2	0.31	0.19	0.43	0.2388	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.180346	NA	NA	0.194229	0.360223	ID=COSM434706;OCCURENCE=1(breast)	0.275	NA	6.0418376
1048	16	718514	718514	C	G	exonic	RHOT2	NA	synonymous SNV	RHOT2:NM_138769:exon3:c.C123G:p.T41T	exonic	ENSG00000140983	NA	nonsynonymous SNV	ENSG00000140983:ENST00000566214:exon3:c.C118G:p.H40D	Score=487;Name=lod=127	NA	16p13.3	NA	NA	Name=14	NA	rs7204542	0.54	0.54	0.551	0.546725	0.662	0.3175	0.5461	0.612	0.5767	0.65	0.31	0.56	0.63	0.6072	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.820155	1.820155	NA	0.688965	0.667454	ID=COSM435726;OCCURENCE=2(breast),1(large_intestine)	0.413	NA	6.041835
1048	5	149457678	149457678	G	A	exonic	CSF1R	NA	synonymous SNV	CSF1R:NM_005211:exon5:c.C726T:p.T242T	exonic	ENSG00000182578	NA	synonymous SNV	ENSG00000182578:ENST00000504875:exon4:c.C726T:p.T242T,ENSG00000182578:ENST00000543093:exon4:c.C726T:p.T242T,ENSG00000182578:ENST00000286301:exon5:c.C726T:p.T242T	Score=309;Name=lod=24	NA	5q32	Score=886;Name=V$RORA1_01	NA	NA	NA	rs2228422	0.38	0.38	0.371	0.38738	0.5457	0.2113	0.366	0.2799	0.5665	0.57	0.19	0.38	0.31	0.5153	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.161873	NA	NA	0.565581	0.315025	ID=COSM149992;OCCURENCE=1(stomach)	0.391	NA	6.0400856
1048	12	3310335	3310335	C	T	intronic	TSPAN9	NA	NA	NA	intronic	ENSG00000011105	NA	NA	NA	Score=704;Name=lod=964	NA	12p13.32	Score=849;Name=V$GR_Q6	NA	Name=12	NA	rs740777	0.32	0.32	0.3	0.29972	0.3201	0.2847	0.3977	0.2806	0.2505	0.31	0.3	0.38	0.3	0.3278	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.289436	2.289436	NA	0.312093	0.299138	NA	0.406	NA	6.040007
1048	1	175097864	175097864	G	A	exonic	TNN	NA	synonymous SNV	TNN:NM_022093:exon15:c.G3312A:p.T1104T	exonic	ENSG00000120332	NA	synonymous SNV	ENSG00000120332:ENST00000239462:exon15:c.G3312A:p.T1104T	Score=555;Name=lod=240	NA	1q25.1	NA	NA	NA	NA	rs12022593	0.2	0.2	0.192	0.175519	0.1948	0.2609	0.1643	0.1082	0.1667	0.2	0.28	0.16	0.13	0.2162	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.72768	NA	NA	0.215814	0.119156	NA	0.138	NA	6.0398526
1048	1	177929987	177929987	T	C	exonic	SEC16B	NA	nonsynonymous SNV	SEC16B:NM_033127:exon7:c.A875G:p.H292R	exonic	ENSG00000120341,ENSG00000254154	NA	nonsynonymous SNV	ENSG00000120341:ENST00000308284:exon7:c.A875G:p.H292R,ENSG00000120341:ENST00000464631:exon7:c.A878G:p.H293R,ENSG00000254154:ENST00000528461:exon7:c.A875G:p.H292R	NA	NA	1q25.2	NA	NA	NA	NA	rs12040910	0.8	0.8	0.802	0.809904	0.7485	0.8075	0.7882	0.8941	0.7771	0.75	0.79	0.79	0.9	0.7723	0.9	0.36	T	0.0	B	0.001	B	0.670	N	1.000	P	-0.345	N	1.01	T	-1.024	T	0.000	T	0.052	1.184	9.814	2.46	0.336	0.146	6.825	1.184081	NA	0.86	0.772727	0.869738	NA	0.819	NA	6.0398064
1048	17	6560578	6560578	A	C	upstream	ALOX15P1	NA	NA	NA	intergenic	ENSG00000264468,ENSG00000141485	dist=1750;dist=27454	NA	NA	Score=278;Name=lod=18	NA	17p13.1	NA	Name=ELF1_(SC-631),CTCF,TAF1,GABP,Pol2	Name=21	NA	rs3894313	0.57	0.57	0.49	0.601238	0.4602	0.7063	0.5605	0.6626	0.5838	0.45	0.68	0.54	0.66	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.453722	NA	NA	NA	NA	NA	0.616	NA	6.0398
1048	17	6560691	6560691	T	G	upstream	ALOX15P1	NA	NA	NA	intergenic	ENSG00000264468,ENSG00000141485	dist=1863;dist=27341	NA	NA	Score=376;Name=lod=45	NA	17p13.1	NA	Name=CTCF,ELF1_(SC-631),Pol2,GABP,TAF1	Name=21	NA	rs2309597	0.52	0.52	0.333	0.601438	0.4602	0.7073	0.5605	0.6626	0.5838	0.4	0.63	0.51	0.61	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.63534	NA	NA	NA	NA	NA	NA	NA	6.0398
1048	11	76814110	76814110	G	A	exonic	OMP	NA	synonymous SNV	OMP:NM_006189:exon1:c.G225A:p.P75P	exonic	ENSG00000254550	NA	synonymous SNV	ENSG00000254550:ENST00000529803:exon1:c.G225A:p.P75P	NA	NA	11q13.5	Score=957;Name=V$P53_02	NA	NA	NA	rs2233549	0.22	0.22	0.18	0.239417	0.2107	0.2321	0.2061	0.1952	0.3599	0.2	0.23	0.22	0.21	0.2206	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.389234	NA	NA	0.195902	0.181943	NA	0.246	NA	6.0394646
1048	6	32522634	32522634	T	C	ncRNA_exonic	HLA-DRB6	NA	NA	NA	ncRNA_exonic	ENSG00000229391	NA	NA	NA	NA	NA	6p21.32	Score=876;Name=V$YY1_01	Name=PAX5-C20	NA	NA	rs34645444	0.61	0.61	0.535	0.649561	0.6282	0.6587	0.6542	0.7201	0.5634	0.59	0.6	0.62	0.67	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.164242	NA	NA	NA	NA	NA	0.007	NA	6.0384666
1048	10	129871690	129871690	A	G	exonic	PTPRE	NA	synonymous SNV	PTPRE:NM_130435:exon14:c.A1380G:p.K460K,PTPRE:NM_006504:exon17:c.A1554G:p.K518K	exonic	ENSG00000132334	NA	synonymous SNV	ENSG00000132334:ENST00000306042:exon14:c.A1380G:p.K460K,ENSG00000132334:ENST00000419012:exon16:c.A1554G:p.K518K,ENSG00000132334:ENST00000254667:exon17:c.A1554G:p.K518K	Score=594;Name=lod=345	NA	10q26.2	NA	NA	NA	NA	rs2275803	0.24	0.24	0.221	0.258786	0.2018	0.2599	0.2435	0.2829	0.2945	0.19	0.27	0.19	0.3	0.223	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.073981	NA	NA	0.203721	0.266909	ID=COSM147089;OCCURENCE=1(stomach)	0.159	NA	6.0381456
1048	21	43522349	43522349	T	C	exonic	UMODL1	NA	synonymous SNV	UMODL1:NM_001004416:exon8:c.T1260C:p.S420S,UMODL1:NM_001199527:exon8:c.T1044C:p.S348S,UMODL1:NM_001199528:exon8:c.T1044C:p.S348S,UMODL1:NM_173568:exon8:c.T1260C:p.S420S	exonic	ENSG00000177398	NA	synonymous SNV	ENSG00000177398:ENST00000400424:exon8:c.T1044C:p.S348S,ENSG00000177398:ENST00000400427:exon8:c.T1044C:p.S348S,ENSG00000177398:ENST00000408910:exon8:c.T1260C:p.S420S,ENSG00000177398:ENST00000408989:exon8:c.T1260C:p.S420S	NA	NA	21q22.3	NA	Name=PAX5-C20	Name=34	NA	rs220109	0.55	0.55	0.546	0.542332	0.5358	0.5813	0.6484	0.4516	0.5562	0.54	0.57	0.6	0.49	0.5498	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.051027	NA	0	0.54332	0.485371	NA	0.551	NA	6.0377466
1048	1	19578053	19578053	C	G	UTR5	EMC1	NM_001271429:c.-50G>C,NM_001271428:c.-50G>C,NM_001271427:c.-50G>C,NM_015047:c.-50G>C	NA	NA	UTR5	ENSG00000053372	ENST00000330263:c.-277C>G	NA	NA	NA	NA	1p36.13	NA	Name=POU2F2,E2F4,HMGN3,E2F6_(H-50),TAF1,Pol2(b),Znf143_(16618-1-AP),Sin3Ak-20,YY1_(C-20),HA-E2F1,Pol2-4H8,E2F6,ZNF263,KAP1,SP1,PU.1,Pol2,Egr-1,YY1,Ini1,Pol2(phosphoS2),PAX5-C20,Oct-2,c-Myc,CCNT2,Max,NFKB,HEY1,TBP,CHD2_(N-1250),GTF2F1_(RAP-74),IRF1,TCF12	Name=148	NA	rs6680255	0.14	0.14	0.14	0.142372	0.1004	NA	0.0922	0.407	0.0102	0.1	NA	0.1	0.39	0.0981	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.831951	1.831951	NA	0.097859	0.365498	NA	0.167	NA	6.0369744
1048	16	84695280	84695280	A	G	exonic	KLHL36	NA	synonymous SNV	KLHL36:NM_024731:exon5:c.A1392G:p.L464L	exonic	ENSG00000135686	NA	synonymous SNV	ENSG00000135686:ENST00000258157:exon4:c.A1203G:p.L401L,ENSG00000135686:ENST00000564996:exon5:c.A1392G:p.L464L	Score=496;Name=lod=138	NA	16q24.1	NA	NA	NA	NA	rs17755815	0.19	0.19	0.202	0.177117	0.2068	0.0347	0.1081	0.3714	0.0798	0.23	0.04	0.12	0.36	0.196	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.250988	1.250988	NA	0.227442	0.35698	ID=COSM435879;OCCURENCE=1(breast)	0.246	NA	6.0364246
1048	11	1774666	1774666	T	C	UTR3	CTSD	NM_001909:c.*67A>G	NA	NA	UTR3	ENSG00000117984	ENST00000236671:c.*67A>G,ENST00000433655:c.*472A>G,ENST00000429746:c.*67A>G	NA	NA	NA	NA	11p15.5	NA	Name=Egr-1	Name=5	NA	rs12214	0.19	0.19	0.194	0.200479	0.2972	0.1042	0.1542	0.1422	0.3119	0.29	0.11	0.17	0.16	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.354237	NA	NA	NA	NA	NA	0.167	NA	6.0361334
1048	3	101133155	101133155	T	C	intronic	SENP7	NA	NA	NA	ncRNA_exonic	ENSG00000232830	NA	NA	NA	Score=655;Name=lod=612	NA	3q12.3	NA	NA	Name=6	NA	rs7622940	0.32	0.32	0.302	0.297524	0.2972	0.373	0.3184	0.2542	0.2638	0.28	0.41	0.35	0.25	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.645842	NA	0.03	NA	NA	NA	0.268	NA	6.0361333
1048	3	100617680	100617680	C	T	exonic	ABI3BP	NA	synonymous SNV	ABI3BP:NM_015429:exon4:c.G408A:p.S136S	exonic	ENSG00000154175	NA	synonymous SNV	ENSG00000154175:ENST00000527258:exon3:c.G165A:p.S55S,ENSG00000154175:ENST00000530539:exon3:c.G228A:p.S76S,ENSG00000154175:ENST00000284322:exon4:c.G408A:p.S136S,ENSG00000154175:ENST00000471714:exon4:c.G408A:p.S136S,ENSG00000154175:ENST00000495063:exon4:c.G408A:p.S136S	NA	NA	3q12.2	Score=837;Name=V$ELK1_01	NA	Name=12	NA	rs2245370	0.75	0.75	0.696	0.728035	0.5239	0.9335	0.6715	0.7519	0.7342	0.61	0.94	0.65	0.81	0.6168	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.086274	NA	NA	0.490118	0.704717	NA	0.63	NA	6.0358486
1049	4	5642274	5642274	T	C	exonic	EVC2	NA	synonymous SNV	EVC2:NM_001166136:exon10:c.A1197G:p.E399E,EVC2:NM_147127:exon10:c.A1437G:p.E479E	exonic	ENSG00000173040	NA	synonymous SNV	ENSG00000173040:ENST00000310917:exon10:c.A1197G:p.E399E,ENSG00000173040:ENST00000344408:exon10:c.A1437G:p.E479E,ENSG00000173040:ENST00000344938:exon10:c.A1437G:p.E479E,ENSG00000173040:ENST00000475313:exon10:c.A1197G:p.E399E,ENSG00000173040:ENST00000509670:exon11:c.A1197G:p.E399E	Score=358;Name=lod=38	NA	4p16.2	NA	NA	NA	NA	rs13131655	0.22	0.22	0.256	0.230032	0.2237	0.001	0.1542	0.5318	0.1186	0.2	0.0017	0.18	0.53	0.1978	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.014421	NA	NA	0.210349	0.460054	NA	0.261	NA	6.0348176
1049	3	196460680	196460680	C	T	exonic	PIGX	NA	synonymous SNV	PIGX:NM_017861:exon6:c.C684T:p.T228T,PIGX:NM_001166304:exon7:c.C738T:p.T246T	exonic	ENSG00000163964	NA	synonymous SNV	ENSG00000163964:ENST00000314118:exon6:c.C561T:p.T187T,ENSG00000163964:ENST00000392391:exon6:c.C684T:p.T228T,ENSG00000163964:ENST00000296333:exon7:c.C738T:p.T246T,ENSG00000163964:ENST00000541663:exon8:c.C414T:p.T138T	Score=259;Name=lod=15	NA	3q29	NA	NA	NA	NA	rs34830136	0.13	0.13	0.132	0.130192	0.2286	0.001	0.1599	0.1241	0.1493	0.21	NA	0.2	0.12	0.1792	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.03299	NA	NA	0.22407	0.161598	NA	0.13	NA	6.0347966
1049	10	133918420	133918420	G	A	exonic	JAKMIP3	NA	synonymous SNV	JAKMIP3:NM_001105521:exon1:c.G108A:p.Q36Q	exonic	ENSG00000188385	NA	synonymous SNV	ENSG00000188385:ENST00000298622:exon1:c.G108A:p.Q36Q	Score=426;Name=lod=72	NA	10q26.3	NA	NA	NA	NA	rs11146177	0.17	0.17	0.175	0.161542	0.2008	0.2014	0.1081	0.1293	0.1616	0.21	0.18	0.16	0.1	0.2457	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.144271	NA	NA	0.1859	0.121227	NA	0.174	NA	6.0342666
1049	1	110210671	110210671	G	T	UTR5	GSTM2	NM_001142368:c.-67G>T,NM_000848:c.-67G>T	NA	NA	UTR5	ENSG00000213366	ENST00000369827:c.-73G>T,ENST00000442650:c.-67G>T,ENST00000369831:c.-67G>T	NA	NA	NA	NA	1p13.3	NA	Name=HMGN3,TAF1,USF1_(SC-8983),Egr-1,Pol2,ELF1_(SC-631),ZBTB7A_(SC-34508),TBP,USF-1	Name=130	NA	rs625456	0.11	0.11	0.102	0.0998403	0.1501	0.001	0.0807	0.1868	0.046	0.16	NA	0.08	0.19	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.81941	NA	NA	0.149277	0.16763	NA	0.116	NA	6.0339564
1049	16	23677006	23677006	A	G	exonic	DCTN5	NA	synonymous SNV	DCTN5:NM_001199743:exon5:c.A408G:p.P136P,DCTN5:NM_032486:exon5:c.A408G:p.P136P	exonic	ENSG00000166847	NA	synonymous SNV	ENSG00000166847:ENST00000566298:exon4:c.A282G:p.P94P,ENSG00000166847:ENST00000300087:exon5:c.A408G:p.P136P,ENSG00000166847:ENST00000563998:exon5:c.A408G:p.P136P,ENSG00000166847:ENST00000568589:exon5:c.A408G:p.P136P	Score=525;Name=lod=181	NA	16p12.2	NA	NA	NA	NA	rs35586	0.25	0.25	0.221	0.233626	0.2117	0.4355	0.1758	0.1021	0.2669	0.21	0.43	0.2	0.11	0.2191	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.22319	NA	0.04	0.202093	0.117433	NA	0.246	NA	6.0337736
1049	16	961051	961051	C	T	exonic	LMF1	NA	synonymous SNV	LMF1:NM_022773:exon4:c.G543A:p.G181G	exonic	ENSG00000103227	NA	synonymous SNV	ENSG00000103227:ENST00000566627:exon3:c.G42A:p.G14G,ENSG00000103227:ENST00000262301:exon4:c.G543A:p.G181G,ENSG00000103227:ENST00000399843:exon4:c.G543A:p.G181G,ENSG00000103227:ENST00000570014:exon4:c.G216A:p.G72G	NA	NA	16p13.3	Score=805;Name=V$STAT5A_02	NA	NA	NA	rs2277893	0.32	0.32	0.312	0.381989	0.1769	0.3056	0.3631	0.5613	0.4427	0.18	0.27	0.31	0.59	0.2742	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.641223	NA	NA	0.182521	0.476382	ID=COSM148000;OCCURENCE=1(stomach)	0.268	NA	6.0330456
1049	6	160543123	160543123	T	C	exonic	SLC22A1	NA	synonymous SNV	SLC22A1:NM_003057:exon1:c.T156C:p.S52S,SLC22A1:NM_153187:exon1:c.T156C:p.S52S	exonic	ENSG00000175003	NA	synonymous SNV	ENSG00000175003:ENST00000324965:exon1:c.T156C:p.S52S,ENSG00000175003:ENST00000366963:exon1:c.T156C:p.S52S,ENSG00000175003:ENST00000457470:exon1:c.T156C:p.S52S,ENSG00000175003:ENST00000460902:exon1:c.T156C:p.S52S,ENSG00000175003:ENST00000539263:exon1:c.T156C:p.S52S	Score=410;Name=lod=62	NA	6q25.3	NA	NA	NA	NA	rs1867351	0.28	0.28	0.273	0.28115	0.1849	0.3909	0.2882	0.326	0.2014	0.18	0.41	0.29	0.29	0.2464	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.336396	NA	NA	0.202558	0.296187	NA	0.29	NA	6.0328086
1049	19	58945089	58945089	A	G	exonic	ZNF132	NA	synonymous SNV	ZNF132:NM_003433:exon3:c.T1722C:p.N574N	exonic	ENSG00000131849	NA	synonymous SNV	ENSG00000131849:ENST00000254166:exon3:c.T1722C:p.N574N	NA	NA	19q13.43	NA	Name=SETDB1	NA	NA	rs3764529	0.16	0.16	0.156	0.14976	0.2445	0.0546	0.1801	0.118	0.1718	0.23	0.06	0.19	0.15	0.1853	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.338818	NA	NA	0.204884	0.115297	NA	0.174	NA	6.0319826
1049	9	77684690	77684690	A	C	exonic	NMRK1	NA	synonymous SNV	NMRK1:NM_017881:exon6:c.T357G:p.T119T	exonic	ENSG00000106733	NA	synonymous SNV	ENSG00000106733:ENST00000361092:exon6:c.T357G:p.T119T,ENSG00000106733:ENST00000376811:exon7:c.T369G:p.T123T	Score=470;Name=lod=108	NA	9q21.13	NA	Name=CEBPB	NA	NA	rs3752955	0.61	0.61	0.619	0.620208	0.5268	0.6776	0.5893	0.7398	0.5174	0.53	0.66	0.55	0.73	0.5644	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.06676	NA	NA	0.543488	0.70926	NA	0.536	NA	6.0319786
1049	17	80615643	80615643	G	A	UTR3	RAB40B	NM_006822:c.*96C>T	NA	NA	UTR3	ENSG00000141542	ENST00000571995:c.*96C>T,ENST00000269347:c.*96C>T	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs3751911	0.18	0.18	0.145	0.186102	0.1392	0.2391	0.2147	0.1089	0.2638	0.13	0.24	0.23	0.14	0.1622	0.24	0	D	.	.	.	.	.	.	1.000	P	.	.	.	.	-1.027	T	0.000	T	.	0.377	6.047	-0.4	-0.064	-0.086	2.909	0.376975	NA	NA	NA	NA	NA	0.116	NA	6.0319334
1049	14	101448425	101448425	C	G	upstream;downstream	SNORD114-22;SNORD114-21	NA	NA	NA	ncRNA_intronic	ENSG00000271417	NA	NA	NA	NA	NA	14q32.31	NA	Name=FOSL2,JunD,c-Jun	Name=39	NA	rs75928883	0.02	0.02	0.024	0.0207668	0.0577	NA	0.0303	0.0023	0.0225	0.06	NA	0.02	0.002	0.0335	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.637997	NA	NA	0.044199	0.010274	NA	0.029	NA	6.0312676
1049	16	11001743	11001743	G	A	exonic	CIITA	NA	synonymous SNV	CIITA:NM_000246:exon11:c.G2394A:p.P798P	exonic	ENSG00000179583	NA	synonymous SNV	ENSG00000179583:ENST00000324288:exon11:c.G2394A:p.P798P	NA	NA	16p13.13	Score=828;Name=V$NFKB_Q6,V$GR_Q6	NA	NA	NA	rs2229320	0.19	0.19	0.15	0.189297	0.2217	0.3145	0.1499	0.0129	0.2935	0.22	0.31	0.17	0.02	0.2122	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.355289	NA	NA	0.20186	0.051867	NA	0.181	NA	6.0309066
1049	1	20915531	20915531	A	G	UTR5	CDA	NM_001785:c.-92A>G	NA	NA	UTR5	ENSG00000158825	ENST00000375071:c.-92A>G	NA	NA	NA	NA	1p36.12	NA	Name=Pol2,Pol2-4H8,Max,CEBPB	Name=34	NA	rs602950	0.21	0.21	0.19	0.188698	0.3032	0.122	0.3084	0.0651	0.2219	0.32	0.13	0.28	0.07	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.294428	NA	NA	NA	NA	NA	0.152	NA	6.0301334
1049	10	54074757	54074757	A	G	exonic	DKK1	NA	synonymous SNV	DKK1:NM_012242:exon2:c.A318G:p.A106A	exonic	ENSG00000107984	NA	synonymous SNV	ENSG00000107984:ENST00000373970:exon2:c.A318G:p.A106A	NA	NA	10q21.1	NA	Name=Pol2,GR	Name=58	NA	rs2241529	0.52	0.52	0.527	0.525359	0.5417	0.2688	0.464	0.7284	0.5419	0.54	0.3	0.5	0.75	0.5383	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.651395	1.651395	NA	0.557093	0.698366	NA	0.457	NA	6.0295736
1049	16	89180695	89180695	C	T	intronic	ACSF3	NA	NA	NA	ncRNA_exonic	ENSG00000261546	NA	NA	NA	NA	NA	16q24.3	NA	Name=EBF,EBF1_(C-8)	Name=8	NA	rs8182228	0.1	0.1	0.113	0.086262	0.1541	0.1319	0.0706	0.0076	0.0869	0.16	0.09	0.1	0.01	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.167052	NA	NA	0.149925	0.031963	NA	0.058	NA	6.0293083
1049	7	100371114	100371114	C	T	exonic	ZAN	NA	unknown	UNKNOWN	exonic	ENSG00000146839	NA	nonsynonymous SNV	ENSG00000146839:ENST00000538115:exon29:c.C5632T:p.P1878S,ENSG00000146839:ENST00000542585:exon29:c.C5632T:p.P1878S,ENSG00000146839:ENST00000546292:exon29:c.C5632T:p.P1878S	Score=412;Name=lod=63	NA	7q22.1	NA	NA	NA	NA	rs314298	0.47	0.47	0.5	0.483826	0.5805	0.1796	0.3833	0.6959	0.4826	0.58	0.15	0.41	0.72	0.5013	0.72	0.06	T	0.288	B	0.094	B	0.893	N	0.000	P	1.7	L	3.33	T	-1.035	T	0.000	T	0.212	2.034	12.76	0.249	-0.064	-0.508	2.904	2.034412	2.034412	NA	0.555583	0.691384	ID=COSM1446674,COSM1446673;OCCURENCE=1(large_intestine)	0.551	NA	6.0292837
1049	7	1132456	1132456	C	T	exonic	GPER	NA	synonymous SNV	GPER:NM_001098201:exon2:c.C1092T:p.T364T,GPER:NM_001505:exon2:c.C1092T:p.T364T,GPER:NM_001039966:exon3:c.C1092T:p.T364T	exonic	ENSG00000164850	NA	synonymous SNV	ENSG00000164850:ENST00000297469:exon2:c.C1092T:p.T364T,ENSG00000164850:ENST00000397088:exon2:c.C1092T:p.T364T,ENSG00000164850:ENST00000401670:exon2:c.C1092T:p.T364T,ENSG00000164850:ENST00000397092:exon3:c.C1092T:p.T364T	NA	NA	7p22.3	Score=842;Name=V$HAND1E47_01	NA	NA	NA	rs10246354	0.14	0.14	0.141	0.129193	0.1968	0.0278	0.2032	0.0764	0.183	0.21	0.03	0.18	0.12	0.205	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.78398	NA	NA	0.235869	0.098502	NA	0.21	NA	6.0289976
1049	21	43236176	43236176	G	A	exonic	PRDM15	NA	synonymous SNV	PRDM15:NM_001040424:exon19:c.C2388T:p.H796H,PRDM15:NM_022115:exon26:c.C3375T:p.H1125H	exonic	ENSG00000141956	NA	synonymous SNV	ENSG00000141956:ENST00000447207:exon18:c.C2277T:p.H759H,ENSG00000141956:ENST00000398548:exon19:c.C2388T:p.H796H,ENSG00000141956:ENST00000447016:exon19:c.C2277T:p.H759H,ENSG00000141956:ENST00000422911:exon20:c.C2448T:p.H816H,ENSG00000141956:ENST00000538201:exon20:c.C2337T:p.H779H,ENSG00000141956:ENST00000269844:exon26:c.C3375T:p.H1125H,ENSG00000141956:ENST00000433067:exon26:c.C3375T:p.H1125H	Score=688;Name=lod=831	NA	21q22.3	NA	NA	NA	NA	rs4075967	0.18	0.18	0.181	0.176917	0.1879	0.2054	0.2248	0.1324	0.1626	0.2	0.18	0.22	0.12	0.2175	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.975852	NA	NA	0.232326	0.154108	NA	0.217	NA	6.0289406
1049	1	85724328	85724328	C	T	exonic	C1orf52	NA	synonymous SNV	C1orf52:NM_198077:exon2:c.G354A:p.P118P	exonic	ENSG00000162642	NA	synonymous SNV	ENSG00000162642:ENST00000344356:exon2:c.G354A:p.P118P,ENSG00000162642:ENST00000471115:exon2:c.G354A:p.P118P	NA	NA	1p22.3	NA	NA	Name=45	NA	rs4949926	0.22	0.22	0.208	0.22484	0.2078	0.2956	0.3156	0.1271	0.2372	0.2	0.28	0.27	0.14	0.2271	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.49744	NA	NA	0.20314	0.135724	NA	0.159	NA	6.0286266
1049	7	100693849	100693849	C	T	exonic	MUC17	NA	synonymous SNV	MUC17:NM_001040105:exon7:c.C12807T:p.T4269T	exonic	ENSG00000169876	NA	synonymous SNV	ENSG00000169876:ENST00000306151:exon7:c.C12807T:p.T4269T	NA	NA	7q22.1	NA	Name=MafK_(SC-477)	NA	NA	rs6978780	0.13	0.13	0.132	0.102436	0.2445	0.0288	0.1585	0.028	0.093	0.24	0.04	0.18	0.04	0.1707	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.237087	NA	NA	0.223023	0.059691	NA	0.094	NA	6.0284436
1049	15	101109677	101109677	C	A	exonic	LINS	NA	nonsynonymous SNV	LINS:NM_001040616:exon7:c.G2040T:p.R680S	exonic	ENSG00000140471	NA	nonsynonymous SNV	ENSG00000140471:ENST00000314742:exon7:c.G2040T:p.R680S	NA	NA	15q26.3	NA	NA	NA	NA	rs8451	0.33	0.33	0.344	0.311502	0.4513	0.246	0.2493	0.2375	0.3793	0.46	0.25	0.29	0.25	0.385	0.47	0.36	T	0.023	B	0.013	B	0.204	N	1.000	P	0.975	L	2.93	T	-0.928	T	0.000	T	0.115	2.243	13.46	0.38	0.292	-0.310	5.997	2.243482	2.243482	0.53	0.469419	0.282569	ID=COSM147993;OCCURENCE=1(stomach)	0.37	NA	6.0276144
1049	7	66018941	66018941	G	A	ncRNA_exonic	LOC493754	NA	NA	NA	ncRNA_intronic	ENSG00000232559	NA	NA	NA	Score=623;Name=lod=452	NA	7q11.21	NA	NA	Name=33	NA	rs10107	0.66	0.66	0.674	0.623203	0.6392	0.5456	0.6398	0.7595	0.4908	0.64	0.56	0.66	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.688619	NA	NA	NA	NA	NA	0.609	NA	6.0274666
1049	17	2966191	2966191	G	A	exonic	OR1D5	NA	synonymous SNV	OR1D5:NM_014566:exon1:c.C711T:p.T237T	exonic	ENSG00000262628	NA	synonymous SNV	ENSG00000262628:ENST00000575751:exon1:c.C711T:p.T237T	Score=389;Name=lod=51	NA	17p13.3	NA	NA	NA	NA	rs2676566	NA	NA	0.233	0.271765	0.333	0.0228	0.2968	0.3843	0.2955	NA	NA	NA	NA	0.3064	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.071214	NA	NA	NA	NA	NA	NA	NA	6.0272666
1049	19	8145921	8145921	C	T	exonic	FBN3	NA	synonymous SNV	FBN3:NM_032447:exon58:c.G7419A:p.P2473P	exonic	ENSG00000142449	NA	synonymous SNV	ENSG00000142449:ENST00000270509:exon58:c.G7419A:p.P2473P,ENSG00000142449:ENST00000600128:exon59:c.G7419A:p.P2473P,ENSG00000142449:ENST00000601739:exon59:c.G7419A:p.P2473P	Score=485;Name=lod=125	NA	19p13.2	NA	Name=FOXA1_(C-20),FOXA2_(SC-6554),FOXA1_(SC-101058)	NA	NA	rs2303168	0.59	0.59	0.623	0.563299	0.5636	0.3581	0.6354	0.8389	0.3507	0.58	0.39	0.62	0.82	0.5378	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.588966	NA	NA	0.538721	0.795052	NA	0.616	NA	6.0265456
1049	11	117335722	117335722	T	C	exonic	DSCAML1	NA	synonymous SNV	DSCAML1:NM_020693:exon17:c.A3381G:p.Q1127Q	exonic	ENSG00000177103	NA	synonymous SNV	ENSG00000177103:ENST00000527706:exon15:c.A2571G:p.Q857Q,ENSG00000177103:ENST00000321322:exon17:c.A3381G:p.Q1127Q	Score=527;Name=lod=184	NA	11q23.3	NA	NA	NA	Score=67;Name=466445_0_+_67	rs538847	0.71	0.71	0.705	0.735823	0.501	0.8958	0.6787	0.8585	0.6871	0.5	0.9	0.65	0.87	0.6144	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.140278	NA	NA	0.524907	0.791004	NA	0.717	NA	6.0263596
1049	15	63047793	63047793	C	T	exonic	TLN2	NA	synonymous SNV	TLN2:NM_015059:exon34:c.C4539T:p.I1513I	exonic	ENSG00000171914	NA	synonymous SNV	ENSG00000171914:ENST00000494733:exon10:c.C1281T:p.I427I,ENSG00000171914:ENST00000306829:exon34:c.C4539T:p.I1513I,ENSG00000171914:ENST00000561311:exon36:c.C4539T:p.I1513I	NA	NA	15q22.2	Score=970;Name=V$GATA1_01	NA	NA	NA	rs4775538	0.22	0.22	0.231	0.231629	0.1988	0.3442	0.1297	0.2466	0.2014	0.19	0.3	0.14	0.24	0.2215	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.202968	NA	NA	0.220581	0.20177	NA	0.203	NA	6.0257856
1049	4	7044600	7044600	G	A	exonic	CCDC96	NA	synonymous SNV	CCDC96:NM_153376:exon1:c.C66T:p.A22A	exonic	ENSG00000173013	NA	synonymous SNV	ENSG00000173013:ENST00000310085:exon1:c.C66T:p.A22A	NA	NA	4p16.1	NA	Name=Mxi1_(bHLH),Pol2,ZNF263,HDAC2_(SC-6296),Sin3Ak-20,HA-E2F1,ETS1,SREBP1	NA	NA	rs2359010	0.19	0.19	0.146	0.195288	0.1859	0.3849	0.1427	0.0121	0.2945	0.2	0.34	0.15	0.03	0.2738	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.023088	NA	NA	0.18133	0.036832	ID=COSM448067;OCCURENCE=1(breast)	0.087	NA	6.0256366
1050	20	3362033	3362033	T	C	exonic	C20orf194	NA	synonymous SNV	C20orf194:NM_001009984:exon3:c.A276G:p.V92V	exonic	ENSG00000088854	NA	synonymous SNV	ENSG00000088854:ENST00000252032:exon3:c.A276G:p.V92V	Score=533;Name=lod=195	NA	20p13	NA	NA	NA	NA	rs6051818	0.24	0.24	0.259	0.23762	0.2197	0.1657	0.1873	0.3759	0.1789	0.22	0.19	0.15	0.38	0.211	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.619991	NA	NA	0.211543	0.364532	NA	0.283	NA	6.0244236
1050	5	37506911	37506911	C	T	intronic	WDR70	NA	NA	NA	ncRNA_exonic	ENSG00000248216	NA	NA	NA	Score=542;Name=lod=213	NA	5p13.2	NA	Name=CTCF	NA	NA	rs13155335	0.29	0.29	0.25	0.278954	0.3091	0.4891	0.2637	0.1044	0.2781	0.3	0.44	0.32	0.09	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.057489	NA	NA	NA	NA	ID=COSN167440;OCCURENCE=1(large_intestine)	0.275	NA	6.0242333
1050	8	24348241	24348241	A	G	intronic	ADAM7	NA	NA	NA	ncRNA_intronic	ENSG00000253535,ENSG00000253643	NA	NA	NA	NA	NA	8p21.2	Score=933;Name=V$LHX3_01	NA	Name=2	NA	rs2242354	0.26	0.26	0.239	0.279952	0.3101	0.1915	0.4323	0.149	0.409	0.31	0.2	0.41	0.15	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.096935	NA	NA	NA	NA	NA	0.196	NA	6.0232333
1050	22	32589023	32589023	C	T	exonic	RFPL2	NA	nonsynonymous SNV	RFPL2:NM_006605:exon1:c.G239A:p.C80Y,RFPL2:NM_001159545:exon3:c.G152A:p.C51Y,RFPL2:NM_001159546:exon3:c.G152A:p.C51Y,RFPL2:NM_001098527:exon4:c.G422A:p.C141Y	exonic	ENSG00000128253	NA	nonsynonymous SNV	ENSG00000128253:ENST00000248980:exon1:c.G239A:p.C80Y,ENSG00000128253:ENST00000248983:exon3:c.G152A:p.C51Y,ENSG00000128253:ENST00000400236:exon4:c.G152A:p.C51Y,ENSG00000128253:ENST00000400237:exon4:c.G422A:p.C141Y	NA	NA	22q12.3	NA	NA	NA	NA	rs136478	0.35	0.35	0.349	0.367812	0.4642	0.1419	0.2723	0.5227	0.3599	0.46	0.13	0.29	0.48	0.396	0.5	1	T	0.286	B	0.295	B	.	.	1.000	P	0.69	N	2.35	T	-0.976	T	0.000	T	0.061	-2.211	0.005	-1.27	-0.335	-1.130	.	-2.211477	NA	1	0.452093	0.497957	NA	0.355	NA	6.0210404
1050	22	43435812	43435812	C	T	exonic	TTLL1	NA	synonymous SNV	TTLL1:NM_012263:exon11:c.G1242A:p.S414S	exonic	ENSG00000100271	NA	synonymous SNV	ENSG00000100271:ENST00000331018:exon10:c.G1155A:p.S385S,ENSG00000100271:ENST00000266254:exon11:c.G1242A:p.S414S	NA	NA	22q13.2	NA	NA	Name=4	NA	rs1052163	0.45	0.45	0.47	0.485623	0.173	0.8333	0.4438	0.5318	0.4162	0.16	0.81	0.39	0.51	0.2977	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.538298	NA	NA	0.175465	0.478438	NA	0.333	NA	6.0205016
1050	1	169823718	169823718	T	C	exonic	SCYL3	NA	nonsynonymous SNV	SCYL3:NM_020423:exon12:c.A1700G:p.Q567R,SCYL3:NM_181093:exon13:c.A1862G:p.Q621R	exonic	ENSG00000000457	NA	nonsynonymous SNV	ENSG00000000457:ENST00000367770:exon12:c.A1862G:p.Q621R,ENSG00000000457:ENST00000367771:exon12:c.A1700G:p.Q567R,ENSG00000000457:ENST00000423670:exon12:c.A1700G:p.Q567R,ENSG00000000457:ENST00000367772:exon13:c.A1862G:p.Q621R	NA	NA	1q24.2	NA	NA	NA	NA	rs4656197	0.65	0.65	0.638	0.679712	0.5875	0.6607	0.7032	0.7148	0.7301	0.58	0.66	0.67	0.72	0.6433	0.72	0.52	T	0.589	P	0.211	B	0.889	N	1.000	P	1.5	L	2.5	T	-0.996	T	0.046	T	0.082	0.763	8.035	-1.02	-0.151	0.202	17.403	0.762505	NA	0.53	0.583488	0.710849	ID=COSM1336135,COSM146679;OCCURENCE=1(stomach),1(large_intestine)	0.522	NA	6.0190454
1050	17	4463796	4463796	G	A	exonic	GGT6	NA	synonymous SNV	GGT6:NM_001122890:exon1:c.C21T:p.P7P,GGT6:NM_153338:exon1:c.C21T:p.P7P	exonic	ENSG00000167741	NA	synonymous SNV	ENSG00000167741:ENST00000301395:exon1:c.C21T:p.P7P,ENSG00000167741:ENST00000381550:exon1:c.C21T:p.P7P,ENSG00000167741:ENST00000574154:exon1:c.C21T:p.P7P,ENSG00000167741:ENST00000574584:exon1:c.C21T:p.P7P	NA	NA	17p13.2	NA	Name=ERalpha_a	NA	NA	rs7216474	0.14	0.14	0.119	0.147764	0.2286	0.0942	0.111	0.0658	0.2566	0.23	0.09	0.13	0.06	0.1917	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.398458	NA	NA	0.227558	0.084203	NA	0.116	NA	6.0188086
1050	20	30382315	30382315	A	G	exonic	TPX2	NA	synonymous SNV	TPX2:NM_012112:exon15:c.A1797G:p.R599R	exonic	ENSG00000088325	NA	synonymous SNV	ENSG00000088325:ENST00000300403:exon15:c.A1797G:p.R599R,ENSG00000088325:ENST00000340513:exon16:c.A1905G:p.R635R	Score=403;Name=lod=58	NA	20q11.21	NA	NA	NA	NA	rs3203770	0.23	0.23	0.225	0.224042	0.2346	NA	0.1599	0.5454	0.0552	0.24	NA	0.17	0.53	0.2027	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.982314	NA	NA	0.21093	0.464367	NA	0.217	NA	6.0184366
1050	5	148620224	148620224	T	G	intronic	ABLIM3	NA	NA	NA	ncRNA_intronic	ENSG00000248647,ENSG00000253406	NA	NA	NA	Score=703;Name=lod=962	NA	5q32	NA	Name=c-Myc	Name=25	NA	rs3797315	0.45	0.45	0.412	0.464856	0.4026	0.6399	0.3963	0.3979	0.4877	0.39	0.59	0.38	0.41	0.4464	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.383724	3.383724	NA	0.466047	0.411257	NA	0.471	NA	6.0182863
1050	6	150211123	150211123	A	T	exonic	RAET1E	NA	nonsynonymous SNV	RAET1E:NM_001243325:exon2:c.T136A:p.Y46N,RAET1E:NM_001243327:exon2:c.T244A:p.Y82N,RAET1E:NM_139165:exon2:c.T244A:p.Y82N,RAET1E:NM_001243328:exon3:c.T244A:p.Y82N	exonic	ENSG00000164520	NA	nonsynonymous SNV	ENSG00000164520:ENST00000357183:exon2:c.T244A:p.Y82N,ENSG00000164520:ENST00000367363:exon2:c.T136A:p.Y46N,ENSG00000164520:ENST00000529948:exon2:c.T244A:p.Y82N,ENSG00000164520:ENST00000532335:exon3:c.T244A:p.Y82N	NA	NA	6q25.1	NA	NA	NA	NA	rs2151910	0.85	0.85	0.856	0.873403	0.7744	0.9524	0.7277	0.9849	0.8466	0.75	0.93	0.75	0.98	0.7855	0.98	1	T	0.0	B	0.0	B	0.022	N	1.000	P	-2.3	N	5.88	T	-0.967	T	0.001	T	0.041	-1.091	0.152	2.51	0.249	0.220	4.354	-1.09063	NA	1	0.755698	0.946437	NA	0.899	NA	6.0177354
1050	1	175087729	175087729	T	C	exonic	TNN	NA	nonsynonymous SNV	TNN:NM_022093:exon11:c.T2419C:p.W807R	exonic	ENSG00000120332	NA	nonsynonymous SNV	ENSG00000120332:ENST00000239462:exon11:c.T2419C:p.W807R	NA	NA	1q25.1	NA	NA	NA	NA	rs6696455	0.43	0.43	0.462	0.473243	0.4513	0.0704	0.3818	0.91	0.3855	0.43	0.08	0.38	0.85	0.4237	0.85	0.25	T	0.0	B	0.001	B	0.972	N	1.000	P	-1.9	N	0.51	T	-0.990	T	0.000	T	0.029	-1.838	0.009	0.856	-0.249	-0.030	4.715	-1.837943	NA	0.42	0.440698	0.82433	NA	0.645	NA	6.0176354
1050	4	41258978	41258978	C	T	UTR5	UCHL1	NM_004181:c.-16C>T	NA	NA	UTR5	ENSG00000154277	ENST00000514924:c.-16C>T,ENST00000503431:c.-16C>T,ENST00000284440:c.-16C>T,ENST00000512419:c.-16C>T,ENST00000505232:c.-16C>T,ENST00000508768:c.-16C>T,ENST00000512788:c.-16C>T	NA	NA	NA	NA	4p13	NA	Name=TBP,TCF12,p300,BCL3,Pol2-4H8,TAF7_(SQ-8),YY1_(C-20),NANOG_(SC-33759),NRSF,Pol2,Pol2(b),TAF1	Name=112	NA	rs9321	0.12	0.12	0.087	0.105631	0.1163	0.1587	0.1153	0.0643	0.089	0.13	0.18	0.12	0.05	0.1104	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.003222	NA	NA	0.089186	0.076033	NA	0.051	NA	6.0174474
1050	22	50658424	50658424	T	C	exonic	TUBGCP6	NA	nonsynonymous SNV	TUBGCP6:NM_020461:exon17:c.A4129G:p.T1377A	exonic	ENSG00000128159	NA	nonsynonymous SNV	ENSG00000128159:ENST00000425018:exon2:c.A187G:p.T63A,ENSG00000128159:ENST00000248846:exon17:c.A4129G:p.T1377A	NA	NA	22q13.33	NA	NA	NA	NA	rs11703226	0.43	0.43	0.397	0.427117	0.4414	0.3948	0.4481	0.4629	0.3824	0.44	0.38	0.42	0.46	0.4319	0.49	0.77	T	0.005	B	0.016	B	0.001	N	1.000	P	0.11	N	3.14	T	-0.921	T	0.000	T	0.041	1.046	9.274	-1.43	0.022	0.876	0.893	1.046404	NA	0.55	0.442674	0.487063	NA	0.355	NA	6.0173594
1050	4	175443261	175443261	G	T	intronic	HPGD	NA	NA	NA	UTR5	ENSG00000164120	ENST00000514584:c.-13357C>A	NA	NA	NA	NA	4q34.1	NA	Name=CTCF	Name=35	NA	rs45567139	0.03	0.03	0.018	0.0163738	0.0467	NA	0.0331	0.0023	0.0092	0.05	NA	0.04	0.0041	0.0423	0.061	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.931741	NA	NA	0.060581	0.010213	NA	NA	NA	6.0170857
1050	14	75359670	75359670	G	A	exonic	DLST	NA	synonymous SNV	DLST:NM_001933:exon8:c.G576A:p.Q192Q	exonic	ENSG00000119689	NA	synonymous SNV	ENSG00000119689:ENST00000334212:exon5:c.G318A:p.Q106Q,ENSG00000119689:ENST00000554806:exon7:c.G525A:p.Q175Q,ENSG00000119689:ENST00000334220:exon8:c.G576A:p.Q192Q	Score=336;Name=lod=31	NA	14q24.3	NA	Name=EBF1_(C-8)	NA	NA	rs2230237	0.62	0.62	0.632	0.665935	0.5308	0.4196	0.5749	0.9781	0.7014	0.54	0.47	0.59	0.97	0.5882	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.700962	NA	NA	0.530581	0.897413	ID=COSM1371111;OCCURENCE=1(large_intestine)	0.543	NA	6.0170856
1050	4	41258970	41258970	A	G	UTR5	UCHL1	NM_004181:c.-24A>G	NA	NA	UTR5	ENSG00000154277	ENST00000514924:c.-24A>G,ENST00000503431:c.-24A>G,ENST00000284440:c.-24A>G,ENST00000512419:c.-24A>G,ENST00000505232:c.-24A>G,ENST00000508768:c.-24A>G,ENST00000512788:c.-24A>G	NA	NA	NA	NA	4p13	NA	Name=TAF7_(SQ-8),YY1_(C-20),Pol2-4H8,NRSF,Pol2,NANOG_(SC-33759),TAF1,Pol2(b),TBP,TCF12,p300,BCL3	Name=112	NA	rs11556271	0.12	0.12	0.089	0.107029	0.1163	0.1587	0.1153	0.0696	0.089	0.13	0.18	0.12	0.06	0.1109	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.440757	1.440757	NA	0.08907	0.080572	NA	0.058	NA	6.0170634
1050	20	3090848	3090848	T	G	exonic	UBOX5	NA	nonsynonymous SNV	UBOX5:NM_001267584:exon5:c.A1525C:p.T509P	exonic	ENSG00000185019	NA	synonymous SNV	ENSG00000185019:ENST00000348031:exon4:c.A1368C:p.R456R,ENSG00000185019:ENST00000217173:exon5:c.A1530C:p.R510R	Score=535;Name=lod=200	NA	20p13	NA	NA	NA	NA	rs708973	0.22	0.22	0.193	0.215655	0.3111	0.119	0.2666	0.1543	0.2638	0.33	0.13	0.26	0.13	0.3172	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.51818	1.51818	NA	0.355116	0.16591	NA	0.348	NA	6.016584
1050	X	322257	322257	G	A	exonic	PPP2R3B	NA	synonymous SNV	PPP2R3B:NM_013239:exon2:c.C393T:p.P131P	exonic	ENSG00000167393	NA	synonymous SNV	ENSG00000167393:ENST00000381625:exon2:c.C309T:p.P103P,ENSG00000167393:ENST00000390665:exon2:c.C393T:p.P131P	Score=610;Name=lod=401	NA	Xp22.33	NA	NA	NA	NA	rs17855192	0.26	0.26	0.25596	NA	NA	NA	NA	NA	NA	0.35	0.22	0.28	0.16	0.2998	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.524673	NA	NA	0.350694	0.201636	NA	0.254	NA	6.0161726
1050	10	85981889	85981889	G	A	exonic	LRIT2	NA	synonymous SNV	LRIT2:NM_001017924:exon3:c.C1440T:p.G480G	exonic	ENSG00000204033	NA	synonymous SNV	ENSG00000204033:ENST00000372113:exon3:c.C1440T:p.G480G,ENSG00000204033:ENST00000538192:exon4:c.C1470T:p.G490G	Score=449;Name=lod=89	NA	10q23.1	NA	NA	NA	NA	rs12218853	0.2	0.2	0.162	0.186102	0.2316	0.2907	0.232	0.0514	0.181	0.22	0.25	0.26	0.07	0.1973	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.935386	NA	NA	0.221628	0.086019	NA	0.123	NA	6.0161386
1050	7	142247347	142247347	A	C	intergenic	LOC730441,MTRNR2L6	dist=275279;dist=126784	NA	NA	exonic	ENSG00000211714	NA	nonsynonymous SNV	ENSG00000211714:ENST00000390361:exon2:c.T109G:p.Y37D	NA	NA	7q34	NA	Name=ERalpha_a,STAT3	Name=36	NA	rs361359	NA	NA	0.362	0.209465	0.2863	0.0238	0.1816	0.3245	0.1861	NA	NA	NA	NA	0.5316	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.717389	NA	0.97	NA	NA	NA	0.304	NA	6.0154334
1051	17	38955173	38955173	G	A	exonic	KRT28	NA	synonymous SNV	KRT28:NM_181535:exon2:c.C529T:p.L177L	exonic	ENSG00000173908	NA	synonymous SNV	ENSG00000173908:ENST00000306658:exon2:c.C529T:p.L177L	Score=401;Name=lod=57	NA	17q21.2	NA	NA	NA	NA	rs7222207	0.14	0.14	0.112	0.131989	0.2306	0.0377	0.1801	0.0711	0.1759	0.24	0.03	0.19	0.07	0.1936	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.232828	NA	NA	0.228425	0.10168	NA	0.101	NA	6.0140416
1051	5	148206646	148206646	G	A	exonic	ADRB2	NA	synonymous SNV	ADRB2:NM_000024:exon1:c.G252A:p.L84L	exonic	ENSG00000169252	NA	synonymous SNV	ENSG00000169252:ENST00000305988:exon1:c.G252A:p.L84L	Score=524;Name=lod=180	NA	5q32	NA	NA	NA	NA	rs1042717	0.28	0.28	0.296	0.314696	0.1988	0.3641	0.2997	0.3404	0.3589	0.21	0.38	0.26	0.31	0.2574	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.262992	NA	NA	0.197907	0.327281	NA	0.196	NA	6.0125596
1051	16	633706	633706	C	T	UTR3	PIGQ	NM_004204:c.*671C>T,NM_148920:c.*72C>T	NA	NA	UTR3	ENSG00000007541	ENST00000321878:c.*671C>T,ENST00000026218:c.*72C>T	NA	NA	NA	NA	16p13.3	NA	Name=Egr-1,ERalpha_a	Name=6	NA	rs1045283	0.11	0.11	0.116	0.135184	0.1581	0.0238	0.0648	0.1483	0.2587	0.17	0.03	0.07	0.15	0.1628	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.20468	NA	NA	NA	NA	NA	0.196	NA	6.0124334
1051	8	120886370	120886370	T	A	intronic	DEPTOR	NA	NA	NA	ncRNA_exonic	ENSG00000245330	NA	NA	NA	NA	NA	8q24.12	NA	Name=E2F6,THAP1_(SC-98174),HA-E2F1,ZNF263	Name=103	NA	rs7840728	0.3	0.3	0.254	0.366813	0.3211	0.0565	0.2133	0.593	0.5368	0.32	0.04	0.24	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.435463	NA	NA	NA	NA	NA	0.275	NA	6.0122333
1051	4	47560163	47560163	C	A	exonic	ATP10D	NA	synonymous SNV	ATP10D:NM_020453:exon12:c.C2307A:p.I769I	exonic	ENSG00000145246	NA	synonymous SNV	ENSG00000145246:ENST00000273859:exon12:c.C2307A:p.I769I	Score=476;Name=lod=115	NA	4p12	NA	NA	NA	NA	rs11729411	0.23	0.23	0.217	0.224641	0.2127	0.2986	0.2925	0.1785	0.1748	0.21	0.29	0.25	0.16	0.2181	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.266492	2.266492	NA	0.223837	0.192692	ID=COSM149670;OCCURENCE=1(stomach)	0.246	NA	6.0120296
1051	13	43639845	43639845	A	C	exonic	DNAJC15	NA	synonymous SNV	DNAJC15:NM_013238:exon2:c.A132C:p.G44G	exonic	ENSG00000120675	NA	synonymous SNV	ENSG00000120675:ENST00000379221:exon2:c.A132C:p.G44G	Score=493;Name=lod=134	NA	13q14.11	NA	NA	NA	NA	rs3783044	0.23	0.23	0.232	0.256589	0.2087	0.2212	0.2795	0.2005	0.4018	0.21	0.21	0.27	0.25	0.2461	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.350971	1.350971	NA	0.200163	0.189968	NA	0.138	NA	6.0117036
1051	9	132377900	132377900	C	T	exonic	C9orf50	NA	nonsynonymous SNV	C9orf50:NM_199350:exon4:c.G743A:p.R248K	exonic	ENSG00000179058	NA	nonsynonymous SNV	ENSG00000179058:ENST00000372478:exon4:c.G743A:p.R248K	NA	NA	9q34.11	NA	NA	NA	NA	rs918165	0.53	0.53	0.545	0.556709	0.4513	0.498	0.5216	0.711	0.5419	0.44	0.5	0.51	0.72	0.4801	0.72	0.92	T	0.0	B	0.0	B	0.504	N	1.000	P	-0.345	N	2.45	T	-0.973	T	0.000	T	0.039	-1.044	0.201	-0.718	-0.455	-0.826	3.890	-1.044468	NA	1	0.390349	0.668861	NA	0.638	NA	6.0115844
1051	14	78390880	78390880	T	C	exonic	ADCK1	NA	synonymous SNV	ADCK1:NM_001142545:exon7:c.T735C:p.N245N,ADCK1:NM_020421:exon8:c.T939C:p.N313N	exonic	ENSG00000063761	NA	synonymous SNV	ENSG00000063761:ENST00000341211:exon7:c.T735C:p.N245N,ENSG00000063761:ENST00000238561:exon8:c.T939C:p.N313N	Score=482;Name=lod=121	NA	14q24.3	NA	NA	NA	NA	rs2302944	0.22	0.22	0.191	0.234625	0.2127	0.2798	0.196	0.1626	0.3354	0.21	0.28	0.22	0.17	0.2301	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.40512	1.40512	NA	0.212674	0.175897	NA	0.138	NA	6.0111926
1051	1	89449399	89449399	T	C	exonic	RBMXL1	NA	synonymous SNV	RBMXL1:NM_019610:exon2:c.A111G:p.V37V,RBMXL1:NM_001162536:exon3:c.A111G:p.V37V	exonic	ENSG00000213516	NA	synonymous SNV	ENSG00000213516:ENST00000321792:exon2:c.A111G:p.V37V,ENSG00000213516:ENST00000399794:exon3:c.A111G:p.V37V	Score=671;Name=lod=711	NA	1p22.2	NA	NA	NA	NA	rs77567101	NA	NA	0.251	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.362	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.175194	2.175194	NA	0.293721	0.378348	NA	0.029	NA	6.0109456
1051	8	33246538	33246538	A	G	exonic	FUT10	NA	synonymous SNV	FUT10:NM_032664:exon4:c.T1155C:p.D385D	exonic	ENSG00000172728	NA	synonymous SNV	ENSG00000172728:ENST00000518672:exon3:c.T1071C:p.D357D,ENSG00000172728:ENST00000327671:exon4:c.T1155C:p.D385D,ENSG00000172728:ENST00000524021:exon4:c.T1071C:p.D357D,ENSG00000172728:ENST00000335589:exon5:c.T969C:p.D323D	Score=474;Name=lod=113	NA	8p12	NA	NA	NA	NA	rs16880849	0.27	0.27	0.245	0.298722	0.1938	0.4692	0.17	0.1808	0.4816	0.21	0.47	0.17	0.18	0.2588	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.923591	NA	NA	0.203256	0.207898	ID=COSM150481;OCCURENCE=1(stomach)	0.225	NA	6.0108106
1051	6	42571346	42571346	A	T	exonic	UBR2	NA	synonymous SNV	UBR2:NM_001184801:exon5:c.A552T:p.S184S,UBR2:NM_015255:exon5:c.A552T:p.S184S	exonic	ENSG00000024048	NA	synonymous SNV	ENSG00000024048:ENST00000372899:exon5:c.A552T:p.S184S,ENSG00000024048:ENST00000372901:exon5:c.A552T:p.S184S,ENSG00000024048:ENST00000372903:exon5:c.A552T:p.S184S	Score=553;Name=lod=235	NA	6p21.1	NA	NA	NA	NA	rs16895863	0.18	0.18	0.189	0.200879	0.2366	0.0893	0.183	0.2352	0.2454	0.23	0.08	0.14	0.26	0.2067	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.339987	1.339987	NA	0.212806	0.232864	NA	0.21	NA	6.0105606
1051	10	27434483	27434483	G	A	exonic	YME1L1	NA	synonymous SNV	YME1L1:NM_001253866:exon3:c.C205T:p.L69L,YME1L1:NM_014263:exon3:c.C205T:p.L69L,YME1L1:NM_139312:exon4:c.C376T:p.L126L	exonic	ENSG00000136758	NA	synonymous SNV	ENSG00000136758:ENST00000375972:exon3:c.C205T:p.L69L,ENSG00000136758:ENST00000376016:exon3:c.C205T:p.L69L,ENSG00000136758:ENST00000427324:exon3:c.C205T:p.L69L,ENSG00000136758:ENST00000326799:exon4:c.C376T:p.L126L,ENSG00000136758:ENST00000396296:exon4:c.C181T:p.L61L	Score=578;Name=lod=297	NA	10p12.1	NA	NA	NA	NA	rs2274634	0.34	0.34	0.324	0.348842	0.2247	0.5506	0.1873	0.3132	0.4315	0.23	0.6	0.19	0.3	0.254	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.878817	NA	NA	0.178181	0.310032	NA	0.254	NA	6.0097856
1051	12	40716260	40716260	T	C	exonic	LRRK2	NA	synonymous SNV	LRRK2:NM_198578:exon37:c.T5457C:p.G1819G	exonic	ENSG00000188906	NA	synonymous SNV	ENSG00000188906:ENST00000298910:exon37:c.T5457C:p.G1819G	Score=559;Name=lod=250	NA	12q12	NA	NA	NA	NA	rs10878371	0.54	0.54	0.51	0.585264	0.5427	0.501	0.6037	0.5862	0.7014	0.55	0.45	0.62	0.54	0.5733	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.400037	NA	NA	0.541512	0.576714	NA	0.551	CLINSIG=unknown;CLNDBN=Parkinson_disease_8\x2c_autosomal_dominant;CLNREVSTAT=single;CLNACC=RCV000032483.1;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet;CLNDSDBID=NBK1208:C1846862:607060:ORPHA2828	6.0091546
1051	1	66067109	66067109	T	C	exonic	LEPR	NA	synonymous SNV	LEPR:NM_001198687:exon8:c.T1029C:p.S343S,LEPR:NM_001198688:exon8:c.T1029C:p.S343S,LEPR:NM_001198689:exon8:c.T1029C:p.S343S,LEPR:NM_001003679:exon9:c.T1029C:p.S343S,LEPR:NM_001003680:exon9:c.T1029C:p.S343S,LEPR:NM_002303:exon9:c.T1029C:p.S343S	exonic	ENSG00000116678	NA	synonymous SNV	ENSG00000116678:ENST00000371058:exon7:c.T1029C:p.S343S,ENSG00000116678:ENST00000344610:exon9:c.T1029C:p.S343S,ENSG00000116678:ENST00000349533:exon9:c.T1029C:p.S343S,ENSG00000116678:ENST00000371059:exon9:c.T1029C:p.S343S,ENSG00000116678:ENST00000371060:exon9:c.T1029C:p.S343S	Score=449;Name=lod=89	NA	1p31.3	NA	NA	NA	NA	rs1805134	0.19	0.19	0.197	0.253994	0.2227	0.0675	0.1455	0.382	0.3824	0.23	0.06	0.16	0.32	0.2287	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.409168	NA	NA	0.206512	0.316387	NA	0.355	NA	6.0087546
1051	4	40337944	40337944	C	T	exonic	CHRNA9	NA	synonymous SNV	CHRNA9:NM_017581:exon2:c.C165T:p.V55V	exonic	ENSG00000174343	NA	synonymous SNV	ENSG00000174343:ENST00000310169:exon2:c.C165T:p.V55V	NA	NA	4p14	NA	NA	Name=6	NA	rs56159866	0.13	0.13	0.108	0.114816	0.2207	0.0496	0.1816	0.0113	0.1656	0.22	0.05	0.21	0.01	0.1861	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.872235	NA	NA	0.251395	0.049932	NA	0.109	NA	6.0084716
1051	19	46274553	46274553	G	A	intronic	DMPK	NA	NA	NA	exonic	ENSG00000104936	NA	nonsynonymous SNV	ENSG00000104936:ENST00000597660:exon4:c.C430T:p.L144F	NA	NA	19q13.32	NA	Name=Pol2	NA	NA	rs112693590	0.03	0.03	0.018	0.0177716	0.0646	NA	0.0288	0.0015	0.002	0.07	NA	0.05	0.002	0.042	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.121116	NA	NA	0.051854	0.006503	NA	0.014	NA	6.0082127
1051	14	24617238	24617238	C	T	exonic	RNF31	NA	synonymous SNV	RNF31:NM_017999:exon2:c.C246T:p.Y82Y	exonic	ENSG00000092098	NA	synonymous SNV	ENSG00000092098:ENST00000558907:exon1:c.C54T:p.Y18Y,ENSG00000092098:ENST00000324103:exon2:c.C246T:p.Y82Y,ENSG00000092098:ENST00000557991:exon3:c.C246T:p.Y82Y	NA	NA	14q12	NA	NA	Name=7	NA	rs2273913	0.34	0.34	0.356	0.34345	0.2306	0.5546	0.2003	0.3782	0.2965	0.22	0.55	0.2	0.4	0.2483	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.984697	NA	NA	0.179799	0.315789	NA	0.268	NA	6.0079676
1051	18	28722103	28722103	T	C	exonic	DSC1	NA	synonymous SNV	DSC1:NM_004948:exon9:c.A1119G:p.L373L,DSC1:NM_024421:exon9:c.A1119G:p.L373L	exonic	ENSG00000134765	NA	synonymous SNV	ENSG00000134765:ENST00000257197:exon9:c.A1119G:p.L373L,ENSG00000134765:ENST00000257198:exon9:c.A1119G:p.L373L	Score=325;Name=lod=28	NA	18q12.1	NA	NA	NA	NA	rs2577074	0.37	0.37	0.361	0.344649	0.2127	0.5655	0.3746	0.4085	0.1452	0.2	0.57	0.35	0.4	0.2591	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.824265	NA	NA	0.187326	0.401952	NA	0.254	NA	6.0075406
1051	17	36894839	36894839	G	A	exonic	PCGF2	NA	synonymous SNV	PCGF2:NM_007144:exon8:c.C435T:p.D145D	exonic	ENSG00000056661	NA	stopgain	ENSG00000056661:ENST00000578109:exon6:c.C277T:p.R93X,ENSG00000056661:ENST00000585100:exon7:c.C439T:p.R147X,ENSG00000056661:ENST00000579882:exon8:c.C439T:p.R147X	Score=414;Name=lod=64	NA	17q12	NA	NA	NA	NA	rs1138349	0.41	0.41	0.408	0.433706	0.4284	0.2758	0.4179	0.5121	0.5072	0.43	0.3	0.44	0.51	0.4423	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.325897	3.325897	NA	0.455116	0.518838	NA	0.457	NA	6.0075173
1051	2	132768019	132768019	C	G	intergenic	C2orf27B,ANKRD30BL	dist=208785;dist=137145	NA	NA	intergenic	ENSG00000236485,ENSG00000226886	dist=16285;dist=27341	NA	NA	Score=557;Name=lod=244	NA	2q21.2	NA	Name=GATA-2	Name=15	NA	rs6734759	NA	NA	0.378	0.397364	0.326	0.3115	0.5403	0.4932	0.3282	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.942352	NA	NA	NA	NA	NA	0.014	NA	6.0073334
1051	19	50383636	50383636	T	C	exonic	TBC1D17	NA	nonsynonymous SNV	TBC1D17:NM_001168222:exon3:c.T197C:p.L66P,TBC1D17:NM_024682:exon4:c.T296C:p.L99P	exonic	ENSG00000104946	NA	nonsynonymous SNV	ENSG00000104946:ENST00000535102:exon3:c.T197C:p.L66P,ENSG00000104946:ENST00000221543:exon4:c.T296C:p.L99P	NA	NA	19q13.33	NA	NA	NA	NA	rs3745486	0.47	0.47	0.448	0.543131	0.4245	0.4246	0.4899	0.6778	0.6431	0.42	0.41	0.49	0.62	0.4827	0.64	0.41	T	0.0	B	0.0	B	0.415	N	1.000	P	-0.69	N	1.6	T	-0.971	T	0.000	T	0.049	-0.634	1.195	1.92	0.215	0.842	1.140	-0.634278	NA	0.27	0.41907	0.638221	NA	0.355	NA	6.0070634
1051	1	229683264	229683264	G	A	exonic	ABCB10	NA	synonymous SNV	ABCB10:NM_012089:exon3:c.C903T:p.S301S	exonic	ENSG00000135776	NA	synonymous SNV	ENSG00000135776:ENST00000344517:exon3:c.C903T:p.S301S	NA	NA	1q42.13	Score=797;Name=V$ARP1_01	NA	NA	NA	rs3738187	0.28	0.28	0.298	0.302516	0.2097	0.1627	0.3285	0.5696	0.1626	0.21	0.14	0.28	0.55	0.2329	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.623835	NA	NA	0.217093	0.526101	NA	0.268	NA	6.0069736
1051	16	71682796	71682796	T	C	exonic	PHLPP2	NA	synonymous SNV	PHLPP2:NM_015020:exon18:c.A3969G:p.L1323L	exonic	ENSG00000040199	NA	synonymous SNV	ENSG00000040199:ENST00000393524:exon17:c.A3768G:p.L1256L,ENSG00000040199:ENST00000356272:exon18:c.A3969G:p.L1323L,ENSG00000040199:ENST00000567016:exon19:c.A4074G:p.L1358L,ENSG00000040199:ENST00000568954:exon19:c.A3969G:p.L1323L	Score=300;Name=lod=22	NA	16q22.2	NA	NA	NA	NA	rs61733125	0.19	0.19	0.175	0.239417	0.2197	0.1895	0.2003	0.118	0.5031	0.2	0.2	0.23	0.12	0.2379	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.977052	NA	NA	0.202674	0.131256	NA	0.167	NA	6.0063926
1051	9	128246786	128246786	G	A	exonic	MAPKAP1	NA	synonymous SNV	MAPKAP1:NM_001006621:exon7:c.C567T:p.H189H,MAPKAP1:NM_001006620:exon8:c.C567T:p.H189H,MAPKAP1:NM_024117:exon8:c.C1035T:p.H345H,MAPKAP1:NM_001006617:exon9:c.C1143T:p.H381H	exonic	ENSG00000119487	NA	synonymous SNV	ENSG00000119487:ENST00000373497:exon4:c.C282T:p.H94H,ENSG00000119487:ENST00000497932:exon5:c.C459T:p.H153H,ENSG00000119487:ENST00000420643:exon6:c.C459T:p.H153H,ENSG00000119487:ENST00000394063:exon7:c.C567T:p.H189H,ENSG00000119487:ENST00000350766:exon8:c.C1035T:p.H345H,ENSG00000119487:ENST00000373498:exon8:c.C1143T:p.H381H,ENSG00000119487:ENST00000373503:exon8:c.C567T:p.H189H,ENSG00000119487:ENST00000265960:exon9:c.C1143T:p.H381H	Score=627;Name=lod=470	NA	9q33.3	NA	NA	NA	NA	rs2070113	0.17	0.17	0.186	0.163738	0.2256	0.2421	0.1643	0.0272	0.2035	0.21	0.26	0.16	0.03	0.1993	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.227875	NA	NA	0.236047	0.065365	NA	0.181	NA	6.0057196
1051	17	76870106	76870106	C	G	intronic	TIMP2	NA	NA	NA	UTR5	ENSG00000035862	ENST00000586057:c.-3018G>C,ENST00000592761:c.-3018G>C	NA	NA	NA	NA	17q25.3	NA	Name=GATA-2,HA-E2F1	Name=6	NA	rs55955357	0.17	0.17	0.163	0.182907	0.161	0.2679	0.1412	0.1067	0.2505	0.16	0.24	0.16	0.13	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.37313	NA	NA	NA	NA	NA	0.152	NA	6.0056667
1051	7	142247348	142247348	T	C	intergenic	LOC730441,MTRNR2L6	dist=275280;dist=126783	NA	NA	exonic	ENSG00000211714	NA	synonymous SNV	ENSG00000211714:ENST00000390361:exon2:c.A108G:p.K36K	NA	NA	7q34	NA	Name=STAT3,ERalpha_a	Name=36	NA	rs371674308	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4946	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.531843	NA	NA	NA	NA	NA	NA	NA	6.0054
1051	15	38614525	38614525	G	A	exonic	SPRED1	NA	synonymous SNV	SPRED1:NM_152594:exon3:c.G291A:p.K97K	exonic	ENSG00000166068	NA	synonymous SNV	ENSG00000166068:ENST00000299084:exon3:c.G291A:p.K97K,ENSG00000166068:ENST00000561317:exon4:c.G228A:p.K76K	Score=714;Name=lod=1066	NA	15q14	Score=838;Name=V$CDP_02	NA	NA	NA	rs7182445	0.82	0.82	0.802	0.80012	0.9006	0.8026	0.8401	0.652	0.8661	0.92	0.8	0.82	0.71	0.8637	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.015576	NA	NA	0.897021	0.686818	NA	0.826	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=Legius_syndrome|not_specified;CLNREVSTAT=single|mult;CLNACC=RCV000034273.2|RCV000041241.2;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet|.;CLNDSDBID=NBK47312:C1969623:611431:ORPHA137605|.	6.0053456
1052	1	11983206	11983206	A	G	exonic	KIAA2013	NA	synonymous SNV	KIAA2013:NM_138346:exon2:c.T1374C:p.F458F	exonic	ENSG00000116685	NA	synonymous SNV	ENSG00000116685:ENST00000376572:exon2:c.T1374C:p.F458F,ENSG00000116685:ENST00000376576:exon2:c.T1374C:p.F458F	Score=581;Name=lod=306	NA	1p36.22	Score=892;Name=V$E2F_03	NA	NA	NA	rs3795408	0.57	0.57	0.558	0.675319	0.5537	0.6796	0.5317	0.8321	0.6861	0.5	0.58	0.47	0.77	0.5929	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.395967	NA	NA	0.515067	0.746795	NA	0.529	NA	6.0049996
1052	7	6066461	6066461	T	C	exonic	EIF2AK1	NA	synonymous SNV	EIF2AK1:NM_001134335:exon14:c.A1659G:p.P553P,EIF2AK1:NM_014413:exon14:c.A1662G:p.P554P	exonic	ENSG00000086232	NA	synonymous SNV	ENSG00000086232:ENST00000536084:exon13:c.A1290G:p.P430P,ENSG00000086232:ENST00000199389:exon14:c.A1662G:p.P554P	NA	NA	7p22.1	NA	Name=CTCF	NA	NA	rs2639	0.31	0.31	0.3	0.33746	0.2048	0.4425	0.219	0.4448	0.3047	0.2	0.44	0.23	0.41	0.2606	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.946816	NA	NA	0.196279	0.438493	ID=COSM150234;OCCURENCE=1(stomach)	0.377	NA	6.0049876
1052	4	164085425	164085425	T	C	exonic	NAF1	NA	nonsynonymous SNV	NAF1:NM_001128931:exon2:c.A484G:p.I162V,NAF1:NM_138386:exon2:c.A484G:p.I162V	exonic	ENSG00000145414	NA	nonsynonymous SNV	ENSG00000145414:ENST00000274054:exon2:c.A484G:p.I162V,ENSG00000145414:ENST00000422287:exon2:c.A484G:p.I162V	NA	NA	4q32.2	NA	NA	NA	NA	rs4691896	0.79	0.79	0.772	0.791534	0.7614	0.7867	0.7767	0.789	0.8415	0.77	0.8	0.8	0.81	0.7961	0.81	0.3	T	0.0	B	0.0	B	0.292	N	0.999	P	-0.805	N	1.63	T	-0.983	T	0.000	T	0.004	-1.698	0.011	-0.137	-0.453	-1.147	1.487	-1.697623	NA	0.87	0.770993	0.776214	NA	0.79	NA	6.0048404
1052	5	176734855	176734855	G	C	exonic	MXD3	NA	synonymous SNV	MXD3:NM_001142935:exon5:c.C432G:p.A144A,MXD3:NM_031300:exon5:c.C432G:p.A144A	exonic	ENSG00000213347	NA	synonymous SNV	ENSG00000213347:ENST00000423571:exon5:c.C432G:p.A144A,ENSG00000213347:ENST00000427908:exon5:c.C432G:p.A144A,ENSG00000213347:ENST00000439742:exon5:c.C432G:p.A144A,ENSG00000213347:ENST00000513169:exon5:c.C183G:p.A61A,ENSG00000213347:ENST00000513063:exon6:c.C432G:p.A144A	NA	NA	5q35.3	NA	NA	Name=3	NA	rs4568379	0.2	0.2	0.209	0.207468	0.2276	0.0258	0.1686	0.3555	0.2014	0.22	0.03	0.21	0.35	0.2262	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.277704	NA	NA	0.208537	0.285274	NA	0.275	NA	6.0043296
1052	9	88959938	88959938	C	T	exonic	ZCCHC6	NA	synonymous SNV	ZCCHC6:NM_001185059:exon5:c.G951A:p.L317L,ZCCHC6:NM_001185074:exon5:c.G951A:p.L317L,ZCCHC6:NM_024617:exon5:c.G951A:p.L317L	exonic	ENSG00000083223	NA	synonymous SNV	ENSG00000083223:ENST00000375947:exon4:c.G450A:p.L150L,ENSG00000083223:ENST00000375960:exon5:c.G951A:p.L317L,ENSG00000083223:ENST00000375961:exon5:c.G951A:p.L317L,ENSG00000083223:ENST00000375963:exon5:c.G951A:p.L317L	Score=541;Name=lod=211	NA	9q21.33	NA	NA	Name=6	NA	rs791323	0.6	0.6	0.626	0.619409	0.5447	0.5308	0.5288	0.8253	0.5736	0.56	0.57	0.47	0.78	0.5755	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.923169	NA	NA	0.543023	0.782342	ID=COSM1463436;OCCURENCE=1(large_intestine)	0.71	NA	6.0034436
1052	11	48387490	48387490	G	A	intergenic	OR4C45,OR4A47	dist=13491;dist=122855	NA	NA	exonic	ENSG00000176540	NA	synonymous SNV	ENSG00000176540:ENST00000319813:exon1:c.C528T:p.H176H	NA	NA	11p11.2	Score=883;Name=V$CEBPB_01	Name=CTCF	NA	NA	rs77144540	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4966	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.64839	NA	NA	NA	NA	NA	0.043	NA	6.0034
1052	1	9030964	9030964	C	T	exonic	CA6	NA	synonymous SNV	CA6:NM_001270502:exon5:c.C384T:p.N128N,CA6:NM_001270501:exon6:c.C588T:p.N196N,CA6:NM_001215:exon7:c.C768T:p.N256N,CA6:NM_001270500:exon7:c.C768T:p.N256N	exonic	ENSG00000131686	NA	synonymous SNV	ENSG00000131686:ENST00000377442:exon6:c.C588T:p.N196N,ENSG00000131686:ENST00000377436:exon7:c.C768T:p.N256N,ENSG00000131686:ENST00000377443:exon7:c.C768T:p.N256N	NA	NA	1p36.23	NA	NA	Name=4	NA	rs3737665	0.27	0.27	0.266	0.288538	0.2097	0.5357	0.2983	0.1165	0.3405	0.2	0.52	0.27	0.1	0.249	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.150672	NA	NA	0.205465	0.162279	NA	0.232	NA	6.0025016
1052	10	99376092	99376092	T	C	exonic	MORN4	NA	synonymous SNV	MORN4:NM_001098831:exon5:c.A369G:p.R123R,MORN4:NM_178832:exon5:c.A369G:p.R123R	exonic	ENSG00000171160	NA	synonymous SNV	ENSG00000171160:ENST00000335628:exon4:c.A543G:p.R181R,ENSG00000171160:ENST00000307450:exon5:c.A369G:p.R123R	Score=512;Name=lod=160	NA	10q24.2	NA	NA	NA	NA	rs3814555	0.3	0.3	0.283	0.298922	0.1978	0.2817	0.2507	0.4864	0.2014	0.19	0.28	0.25	0.52	0.2481	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.422998	1.422998	NA	0.219302	0.435996	ID=COSM147019,COSM147020;OCCURENCE=1(stomach)	0.326	NA	6.0014646
1052	7	22862467	22862467	G	A	UTR5	TOMM7	NM_019059:c.-69C>T	NA	NA	UTR5	ENSG00000196683	ENST00000358435:c.-69C>T	NA	NA	NA	NA	7p15.3	NA	Name=YY1,CTCF_(SC-5916),Pol2-4H8,KAP1,ZNF263,HEY1,NFKB,AP-2gamma,STAT2,c-Myc,ZBTB7A_(SC-34508),CTCF_(C-20),SIX5,SRF,GTF2B,Nrf1,TBP,TAF1,GATA-1,E2F4,SMC3_(ab9263),Pol2(phosphoS2),TCF4,Mxi1_(bHLH),ATF3,NRSF,Pol2,E2F6,TR4,USF1_(SC-8983),TAF7_(SQ-8),YY1_(C-20),ELF1_(SC-631),Rad21,Max,CTCF,CEBPB,GTF2F1_(RAP-74)	Name=148	NA	rs2270105	0.5	0.5	0.479	0.523762	0.332	0.6528	0.3559	0.711	0.454	0.35	0.66	0.34	0.68	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.146353	NA	NA	NA	NA	NA	0.457	NA	6.0013334
1052	19	45395714	45395714	T	C	exonic	TOMM40	NA	synonymous SNV	TOMM40:NM_001128917:exon2:c.T339C:p.F113F,TOMM40:NM_001128916:exon3:c.T339C:p.F113F,TOMM40:NM_006114:exon3:c.T339C:p.F113F	exonic	ENSG00000130204	NA	synonymous SNV	ENSG00000130204:ENST00000426677:exon2:c.T339C:p.F113F,ENSG00000130204:ENST00000252487:exon3:c.T339C:p.F113F,ENSG00000130204:ENST00000405636:exon3:c.T339C:p.F113F,ENSG00000130204:ENST00000589649:exon3:c.T339C:p.F113F,ENSG00000130204:ENST00000592434:exon3:c.T339C:p.F113F	Score=589;Name=lod=329	NA	19q13.32	NA	NA	NA	NA	rs157581	0.29	0.29	0.279	0.30631	0.2078	0.246	0.2507	0.5023	0.2444	0.2	0.24	0.27	0.5	0.2483	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.522899	1.522899	NA	0.209651	0.46709	NA	0.341	NA	6.0009156
1052	1	15904318	15904318	C	T	exonic	AGMAT	NA	synonymous SNV	AGMAT:NM_024758:exon5:c.G762A:p.S254S	exonic	ENSG00000116771	NA	synonymous SNV	ENSG00000116771:ENST00000375826:exon5:c.G762A:p.S254S	NA	NA	1p36.21	NA	NA	Name=15	NA	rs11544523	0.24	0.24	0.246	0.23742	0.2177	0.0565	0.1873	0.4493	0.1933	0.22	0.06	0.24	0.46	0.2248	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.117387	NA	NA	0.223488	0.429414	NA	0.203	NA	6.0006786
1052	4	121958697	121958697	G	A	exonic	NDNF	NA	synonymous SNV	NDNF:NM_024574:exon4:c.C429T:p.S143S	exonic	ENSG00000173376	NA	synonymous SNV	ENSG00000173376:ENST00000379692:exon4:c.C429T:p.S143S,ENSG00000173376:ENST00000515757:exon4:c.C429T:p.S143S	Score=376;Name=lod=45	NA	4q27	Score=965;Name=V$GATA1_01	NA	NA	NA	rs3733560	0.44	0.44	0.403	0.399161	0.5656	0.5962	0.4438	0.0756	0.4305	0.56	0.57	0.47	0.09	0.5152	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.034018	NA	NA	0.585237	0.156089	NA	0.449	NA	6.0006296
1052	7	100608868	100608868	A	G	intergenic	ACHE,MUC12	dist=115327;dist=4036	NA	NA	exonic	ENSG00000169894	NA	synonymous SNV	ENSG00000169894:ENST00000422757:exon6:c.A717G:p.L239L,ENSG00000169894:ENST00000319509:exon7:c.A2247G:p.L749L	NA	NA	7q22.1	NA	Name=c-Myc,ZBTB7A_(SC-34508),USF-1,Sin3Ak-20,HDAC2_(SC-6296),Rad21,CTCF,GABP,HMGN3,ETS1,E2F6_(H-50),E2F6	Name=5	NA	rs67377634	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4994	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.164209	NA	NA	NA	NA	NA	0.007	NA	6.0006
1052	11	3913663	3913663	G	T	intronic	STIM1	NA	NA	NA	ncRNA_exonic	ENSG00000230593	NA	NA	NA	Score=711;Name=lod=1029	NA	11p15.4	NA	Name=TAL1_(SC-12984),GATA2_(CG2-96)	NA	NA	rs10835252	0.26	0.26	0.242	0.286342	0.333	0.3442	0.2882	0.1316	0.3865	0.33	0.34	0.22	0.08	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.634367	NA	NA	NA	NA	NA	0.225	NA	6.0003333
1052	11	3914033	3914033	C	A	intronic	STIM1	NA	NA	NA	ncRNA_exonic	ENSG00000230593	NA	NA	NA	Score=711;Name=lod=1029	NA	11p15.4	NA	NA	Name=3	NA	rs10767685	0.26	0.26	0.233	0.289337	0.333	0.3591	0.2882	0.1316	0.3865	0.33	0.36	0.22	0.08	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.100745	NA	NA	NA	NA	NA	0.21	NA	6.0003333
1052	7	100553002	100553002	A	G	intergenic	ACHE,MUC12	dist=59461;dist=59902	NA	NA	exonic	ENSG00000169894	NA	synonymous SNV	ENSG00000169894:ENST00000414964:exon1:c.A117G:p.K39K,ENSG00000169894:ENST00000422757:exon1:c.A117G:p.K39K,ENSG00000169894:ENST00000319509:exon2:c.A1647G:p.K549K	Score=265;Name=lod=16	NA	7q22.1	NA	Name=CTCF	NA	NA	rs68094465	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4999	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.250772	NA	NA	NA	NA	NA	0.5	NA	6.0001
1052	1	13183511	13183511	T	C	exonic	LOC440563	NA	nonsynonymous SNV	LOC440563:NM_001136561:exon2:c.A362G:p.D121G	ncRNA_exonic	ENSG00000179412	NA	NA	NA	Score=723;Name=lod=1157	NA	1p36.21	NA	NA	NA	NA	rs1737105	NA	NA	0.466	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.55941	NA	NA	NA	NA	NA	0.029	NA	6
1052	1	78045089	78045089	C	T	intronic	ZZZ3	NA	NA	NA	intronic	ENSG00000036549	NA	NA	NA	NA	NA	1p31.1	NA	NA	Name=2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.227184	NA	NA	NA	NA	NA	NA	NA	6
1052	1	119157316	119157316	C	A	intergenic	SPAG17,TBX15	dist=429468;dist=268350	NA	NA	ncRNA_exonic	ENSG00000226126	NA	NA	NA	Score=838;Name=lod=3396	NA	1p12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.893082	NA	NA	NA	NA	NA	NA	NA	6
1052	1	144918034	144918034	A	G	intronic	NBPF9,PDE4DIP	NA	NA	NA	intronic	ENSG00000178104	NA	NA	NA	NA	NA	1q21.1	NA	Name=CTCF	Name=143	NA	rs2655804	NA	NA	0.201	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.242708	NA	NA	NA	NA	NA	0.196	NA	6
1052	1	144923535	144923535	A	G	intronic	NBPF9,PDE4DIP	NA	NA	NA	intronic	ENSG00000178104	NA	NA	NA	NA	NA	1q21.1	NA	Name=c-Fos	Name=69	NA	rs1778127	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.835184	NA	NA	NA	NA	NA	0.5	NA	6
1052	2	8822912	8822912	A	C	intronic	ID2	NA	NA	NA	intronic	ENSG00000115738	NA	NA	NA	NA	NA	2p25.1	NA	Name=Pol2	Name=131	NA	rs3845751	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.658905	NA	NA	NA	NA	NA	0.703	NA	6
1052	2	30862949	30862949	G	A	intronic	LCLAT1	NA	NA	NA	intronic	ENSG00000172954	NA	NA	NA	NA	NA	2p23.1	NA	NA	Name=4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.950535	NA	NA	NA	NA	NA	NA	NA	6
1052	2	87449510	87449510	T	C	intergenic	LOC285074,LINC00152	dist=145974;dist=305464	NA	NA	ncRNA_exonic	ENSG00000233671	NA	NA	NA	NA	NA	2p11.2	NA	Name=CEBPB	Name=56	NA	rs62145256	0.55	0.55	0.492	NA	NA	NA	NA	NA	NA	0.58	0.44	0.7	0.51	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.108545	NA	NA	NA	NA	NA	0.123	NA	6
1052	2	91777983	91777983	T	C	intergenic	NONE,LOC654342	dist=NONE;dist=46726	NA	NA	ncRNA_intronic	ENSG00000233991	NA	NA	NA	NA	NA	2p11.1	NA	Name=SUZ12	Name=62	NA	rs2558001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.176325	NA	NA	NA	NA	NA	0.42	NA	6
1052	2	91777987	91777987	T	C	intergenic	NONE,LOC654342	dist=NONE;dist=46722	NA	NA	ncRNA_intronic	ENSG00000233991	NA	NA	NA	NA	NA	2p11.1	NA	Name=SUZ12	Name=62	NA	rs2558000	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011036	NA	NA	NA	NA	NA	0.449	NA	6
1052	2	91791058	91791058	G	A	intergenic	NONE,LOC654342	dist=NONE;dist=33651	NA	NA	ncRNA_intronic	ENSG00000233991	NA	NA	NA	NA	NA	2p11.1	NA	Name=ZZZ3	Name=5	NA	rs2557974	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.205743	NA	NA	NA	NA	NA	0.5	NA	6
1052	2	91791094	91791094	G	A	intergenic	NONE,LOC654342	dist=NONE;dist=33615	NA	NA	ncRNA_intronic	ENSG00000233991	NA	NA	NA	NA	NA	2p11.1	NA	Name=ZZZ3	Name=5	NA	rs2557973	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.570126	NA	NA	NA	NA	NA	0.5	NA	6
1052	2	91791139	91791139	G	A	intergenic	NONE,LOC654342	dist=NONE;dist=33570	NA	NA	ncRNA_intronic	ENSG00000233991	NA	NA	NA	NA	NA	2p11.1	NA	Name=ZZZ3	Name=5	NA	rs2647781	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.375898	NA	NA	NA	NA	NA	0.5	NA	6
1052	2	91800211	91800211	A	T	intergenic	NONE,LOC654342	dist=NONE;dist=24498	NA	NA	ncRNA_exonic	ENSG00000233991	NA	NA	NA	Score=567;Name=lod=269	NA	2p11.1	NA	Name=BRF2,SUZ12	NA	NA	rs2531389	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.835251	1.835251	NA	NA	NA	NA	0.5	NA	6
1052	2	91800960	91800960	G	C	intergenic	NONE,LOC654342	dist=NONE;dist=23749	NA	NA	ncRNA_exonic	ENSG00000233991	NA	NA	NA	Score=265;Name=lod=16	NA	2p11.1	NA	NA	Name=8	NA	rs1640044	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4383	NA	NA	NA	NA	NA	0.5	NA	6
1052	2	91924782	91924782	C	A	intergenic	LOC654342,GGT8P	dist=76807;dist=38586	NA	NA	ncRNA_exonic	ENSG00000223703	NA	NA	NA	Score=563;Name=lod=260	NA	2p11.1	Score=782;Name=V$PPARA_01	NA	NA	NA	rs4004379	NA	NA	0.131	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.851031	NA	NA	NA	NA	NA	NA	NA	6
1052	2	130751697	130751697	T	C	intergenic	RAB6C,LOC440905	dist=11386;dist=31875	NA	NA	ncRNA_intronic	ENSG00000180178	NA	NA	NA	Score=720;Name=lod=1121	NA	2q21.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.592685	NA	NA	NA	NA	NA	NA	NA	6
1052	2	133020382	133020382	C	T	intergenic	ANKRD30BL,GPR39	dist=4840;dist=153765	NA	NA	ncRNA_exonic	ENSG00000233786	NA	NA	NA	Score=762;Name=lod=1662	NA	2q21.2	NA	NA	Name=139	NA	rs113897499	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.444157	NA	NA	NA	NA	NA	0.014	NA	6
1052	2	133020404	133020404	T	G	intergenic	ANKRD30BL,GPR39	dist=4862;dist=153743	NA	NA	ncRNA_exonic	ENSG00000233786	NA	NA	NA	Score=762;Name=lod=1662	NA	2q21.2	NA	NA	Name=139	NA	rs75576404	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.692925	NA	NA	NA	NA	NA	0.022	NA	6
1052	2	133074718	133074718	A	C	intergenic	ANKRD30BL,GPR39	dist=59176;dist=99429	NA	NA	ncRNA_exonic	ENSG00000018607	NA	NA	NA	NA	NA	2q21.2	NA	Name=STAT3	Name=7	NA	rs4953961	NA	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.064346	NA	NA	NA	NA	NA	0.5	NA	6
1052	2	133074851	133074851	A	T	intergenic	ANKRD30BL,GPR39	dist=59309;dist=99296	NA	NA	ncRNA_exonic	ENSG00000018607	NA	NA	NA	NA	NA	2q21.2	NA	Name=STAT3	Name=7	NA	rs7355688	NA	NA	0.366	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.154519	NA	NA	NA	NA	NA	0.486	NA	6
1052	2	133074876	133074876	A	G	intergenic	ANKRD30BL,GPR39	dist=59334;dist=99271	NA	NA	ncRNA_exonic	ENSG00000018607	NA	NA	NA	NA	NA	2q21.2	NA	Name=STAT3	Name=7	NA	rs7355689	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.385756	NA	NA	NA	NA	NA	0.471	NA	6
1052	2	133076048	133076048	A	G	intergenic	ANKRD30BL,GPR39	dist=60506;dist=98099	NA	NA	ncRNA_exonic	ENSG00000018607	NA	NA	NA	Score=412;Name=lod=63	NA	2q21.2	NA	Name=SETDB1	NA	NA	rs2598808	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.243114	NA	NA	NA	NA	NA	0.5	NA	6
1052	2	133076206	133076206	C	T	intergenic	ANKRD30BL,GPR39	dist=60664;dist=97941	NA	NA	ncRNA_exonic	ENSG00000018607	NA	NA	NA	NA	NA	2q21.2	NA	Name=SETDB1	Name=9	NA	rs2598807	NA	NA	0.332	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.109143	NA	NA	NA	NA	NA	0.5	NA	6
1052	3	63082076	63082076	C	T	intergenic	CADPS,LINC00698	dist=221012;dist=6288	NA	NA	ncRNA_exonic	ENSG00000242841	NA	NA	NA	Score=510;Name=lod=157	NA	3p14.2	NA	NA	NA	NA	NA	NA	NA	NA	0.000199681	NA	NA	0.0014	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.147366	NA	NA	NA	NA	NA	NA	NA	6
1052	3	192125737	192125737	G	A	intronic	FGF12	NA	NA	NA	intronic	ENSG00000114279	NA	NA	NA	NA	NA	3q28	NA	NA	Name=38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.385006	NA	NA	NA	NA	NA	NA	NA	6
1052	4	64956	64956	G	A	intronic	ZNF595,ZNF718	NA	NA	NA	intronic	ENSG00000197701	NA	NA	NA	NA	NA	4p16.3	NA	Name=c-Myc	Name=34	NA	rs3904490	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.432317	NA	NA	NA	NA	NA	0.514	NA	6
1052	4	70257215	70257215	A	C	intergenic	UGT2B28,UGT2B4	dist=96447;dist=88668	NA	NA	ncRNA_exonic	ENSG00000215110	NA	NA	NA	Score=387;Name=lod=50	NA	4q13.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.69593	NA	0.03	NA	NA	NA	NA	NA	6
1052	4	75858646	75858646	G	C	intronic	PARM1	NA	NA	NA	intronic	ENSG00000169116	NA	NA	NA	NA	NA	4q13.3	NA	Name=Pol2,Nrf1,c-Myc,SUZ12,ELF1_(SC-631)	Name=15	NA	rs189562495	0.0032	0.0032	NA	0.00359425	NA	NA	NA	0.0136	NA	NA	NA	NA	0.01	NA	0.018	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.868171	NA	NA	0	0.018064	NA	NA	NA	6
1052	5	10664799	10664799	G	A	intergenic	ANKRD33B,DAP	dist=6871;dist=14543	NA	NA	ncRNA_exonic	ENSG00000251548	NA	NA	NA	Score=726;Name=lod=1191	NA	5p15.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.823652	NA	NA	NA	NA	NA	NA	NA	6
1052	5	16694309	16694309	T	C	intronic	MYO10	NA	NA	NA	intronic	ENSG00000145555	NA	NA	NA	NA	NA	5p15.1	NA	Name=GATA-2	Name=31	NA	rs25910	0.58	0.58	0.571	NA	NA	NA	NA	NA	NA	0.5	0.53	0.6	0.75	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.09179	NA	NA	NA	NA	NA	0.587	NA	6
1052	5	29882284	29882284	G	A	intergenic	LSP1P3,CDH6	dist=954864;dist=1311478	NA	NA	ncRNA_exonic	ENSG00000233787	NA	NA	NA	Score=304;Name=lod=23	NA	5p13.3	NA	Name=MafF_(M8194),MafK_(SC-477),MafK_(ab50322)	NA	NA	rs2288448	0.49	0.49	0.523	NA	NA	NA	NA	NA	NA	0.65	0.19	0.43	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.144833	NA	NA	NA	NA	NA	0.435	NA	6
1052	5	137281763	137281763	G	A	intronic	FAM13B	NA	NA	NA	intronic	ENSG00000031003	NA	NA	NA	NA	NA	5q31.2	NA	Name=MafK_(ab50322),MafF_(M8194),MafK_(SC-477)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.831845	NA	NA	NA	NA	NA	NA	NA	6
1052	5	176815880	176815880	G	A	intronic	SLC34A1	NA	NA	NA	intronic	ENSG00000131183	NA	NA	NA	NA	NA	5q35.3	NA	Name=CTCF	Name=15	NA	rs56297224	0.21	0.21	0.205	NA	NA	NA	NA	NA	NA	0.28	0.24	0.26	0.04	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.837083	NA	NA	NA	NA	NA	0.225	NA	6
1052	5	180541263	180541263	T	C	intergenic	BTNL9,OR2V1	dist=52740;dist=10094	NA	NA	ncRNA_exonic	ENSG00000248560	NA	NA	NA	Score=546;Name=lod=220	NA	5q35.3	NA	NA	NA	NA	NA	NA	NA	NA	0.000199681	NA	NA	0.0014	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.773738	NA	NA	NA	NA	NA	NA	NA	6
1052	6	57467323	57467323	G	C	intronic	PRIM2	NA	NA	NA	intronic	ENSG00000146143	NA	NA	NA	Score=358;Name=lod=38	NA	6p11.2	NA	NA	Name=40	NA	rs4424069	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.965304	1.965304	NA	NA	NA	NA	0.464	NA	6
1052	6	108326252	108326252	C	A	intergenic	SEC63,OSTM1	dist=46770;dist=36361	NA	NA	ncRNA_exonic	ENSG00000225093	NA	NA	NA	Score=669;Name=lod=697	NA	6q21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.426727	NA	NA	NA	NA	NA	NA	NA	6
1052	6	127677841	127677841	G	C	intergenic	ECHDC1,SOGA3	dist=13087;dist=81710	NA	NA	ncRNA_exonic	ENSG00000213131	NA	NA	NA	Score=686;Name=lod=815	NA	6q22.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.754436	1.754436	NA	NA	NA	NA	NA	NA	6
1052	7	32109850	32109850	T	C	intronic	PDE1C	NA	NA	NA	intronic	ENSG00000154678	NA	NA	NA	NA	NA	7p14.3	NA	Name=SUZ12	Name=25	NA	rs183858827	0.0005	0.0005	NA	0.000199681	NA	NA	0.0014	NA	NA	NA	NA	0.0028	NA	NA	0.0028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.606046	NA	NA	NA	NA	NA	NA	NA	6
1052	7	64800525	64800525	C	T	intergenic	CCT6P3,ZNF92	dist=265434;dist=38243	NA	NA	ncRNA_exonic	ENSG00000231556	NA	NA	NA	Score=558;Name=lod=247	NA	7q11.21	NA	NA	NA	NA	NA	NA	NA	NA	0.000199681	NA	NA	0.0014	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.375156	NA	NA	NA	NA	NA	NA	NA	6
1052	7	100609966	100609966	T	C	intergenic	ACHE,MUC12	dist=116425;dist=2938	NA	NA	ncRNA_intronic	ENSG00000225946	NA	NA	NA	NA	NA	7q22.1	NA	Name=CTCF,PU.1	Name=16	NA	rs10274451	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.297831	NA	NA	NA	NA	NA	0.522	NA	6
1052	7	100609987	100609987	T	C	intergenic	ACHE,MUC12	dist=116446;dist=2917	NA	NA	ncRNA_intronic	ENSG00000225946	NA	NA	NA	NA	NA	7q22.1	NA	Name=CTCF	Name=16	NA	rs10274460	NA	NA	0.574	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.097184	NA	NA	NA	NA	NA	0.543	NA	6
1052	7	156974417	156974417	G	T	intronic	UBE3C	NA	NA	NA	intronic	ENSG00000009335	NA	NA	NA	NA	NA	7q36.3	NA	NA	Name=2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.233185	NA	NA	NA	NA	NA	NA	NA	6
1052	8	48076612	48076612	A	G	intergenic	LINC00293,LOC100287846	dist=309205;dist=24318	NA	NA	ncRNA_exonic	ENSG00000248531	NA	NA	NA	Score=415;Name=lod=65	NA	8q11.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.743215	NA	NA	NA	NA	NA	NA	NA	6
1052	9	67334949	67334949	T	C	intergenic	AQP7P1,FAM27B	dist=45457;dist=457980	NA	NA	ncRNA_exonic	ENSG00000237238	NA	NA	NA	Score=537;Name=lod=203	NA	9q13	NA	NA	Name=10	NA	rs9330415	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.305241	NA	NA	NA	NA	NA	NA	NA	6
1052	10	29813396	29813396	C	G	intronic	SVIL	NA	NA	NA	intronic	ENSG00000197321	NA	NA	NA	Score=265;Name=lod=16	NA	10p11.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.754418	NA	NA	NA	NA	NA	NA	NA	6
1052	10	30915930	30915930	T	G	intronic	LYZL2	NA	NA	NA	intronic	ENSG00000151033	NA	NA	NA	NA	NA	10p11.23	NA	Name=CTCF	Name=4	NA	rs2370118	0.11	0.11	0.094	NA	NA	NA	NA	NA	NA	0.15	NA	0.15	0.15	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.326849	NA	NA	NA	NA	NA	NA	NA	6
1052	10	30915944	30915944	C	T	intronic	LYZL2	NA	NA	NA	intronic	ENSG00000151033	NA	NA	NA	NA	NA	10p11.23	NA	Name=CTCF	Name=4	NA	rs7079130	0.11	0.11	0.083	NA	NA	NA	NA	NA	NA	0.15	NA	0.14	0.15	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.574798	2.574798	NA	NA	NA	NA	NA	NA	6
1052	10	52487681	52487681	G	A	intergenic	SGMS1,ASAH2B	dist=103944;dist=12007	NA	NA	ncRNA_exonic	ENSG00000213667	NA	NA	NA	Score=775;Name=lod=1882	NA	10q11.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.124768	NA	NA	NA	NA	NA	NA	NA	6
1052	10	112645152	112645152	A	G	intronic	PDCD4	NA	NA	NA	intronic	ENSG00000150593	NA	NA	NA	Score=251;Name=lod=14	NA	10q25.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.177701	3.177701	NA	NA	NA	NA	NA	NA	6
1052	11	57344469	57344469	A	G	intergenic	UBE2L6,SERPING1	dist=8666;dist=20558	NA	NA	ncRNA_exonic	ENSG00000240371	NA	NA	NA	Score=810;Name=lod=2620	NA	11q12.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.787134	NA	NA	NA	NA	NA	NA	NA	6
1052	11	64942404	64942404	T	G	intergenic	SPDYC,CAPN1	dist=1716;dist=6282	NA	NA	ncRNA_exonic	ENSG00000255200	NA	NA	NA	NA	NA	11q13.1	NA	Name=c-Myc,YY1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.966417	NA	NA	NA	NA	NA	NA	NA	6
1052	12	25957237	25957237	T	C	intergenic	IFLTD1,MIR4302	dist=155741;dist=69716	NA	NA	ncRNA_exonic	ENSG00000255725	NA	NA	NA	Score=557;Name=lod=245	NA	12p12.1	NA	NA	Name=35	NA	rs77818804	NA	NA	0.189	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.082142	NA	NA	NA	NA	NA	NA	NA	6
1052	12	25957238	25957238	G	A	intergenic	IFLTD1,MIR4302	dist=155742;dist=69715	NA	NA	ncRNA_exonic	ENSG00000255725	NA	NA	NA	Score=557;Name=lod=245	NA	12p12.1	NA	NA	Name=35	NA	rs79801762	NA	NA	0.187	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.262944	NA	NA	NA	NA	NA	NA	NA	6
1052	12	25957284	25957284	G	A	intergenic	IFLTD1,MIR4302	dist=155788;dist=69669	NA	NA	ncRNA_exonic	ENSG00000255725	NA	NA	NA	Score=557;Name=lod=245	NA	12p12.1	NA	NA	Name=35	NA	rs74586715	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.604344	NA	NA	NA	NA	NA	NA	NA	6
1052	12	25957285	25957285	A	G	intergenic	IFLTD1,MIR4302	dist=155789;dist=69668	NA	NA	ncRNA_exonic	ENSG00000255725	NA	NA	NA	Score=557;Name=lod=245	NA	12p12.1	NA	NA	Name=35	NA	rs76555392	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.446709	NA	NA	NA	NA	NA	NA	NA	6
1052	12	25957298	25957298	C	T	intergenic	IFLTD1,MIR4302	dist=155802;dist=69655	NA	NA	ncRNA_exonic	ENSG00000255725	NA	NA	NA	Score=557;Name=lod=245	NA	12p12.1	NA	NA	Name=35	NA	rs77668942	NA	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.351956	NA	NA	NA	NA	NA	NA	NA	6
1052	12	25957299	25957299	A	G	intergenic	IFLTD1,MIR4302	dist=155803;dist=69654	NA	NA	ncRNA_exonic	ENSG00000255725	NA	NA	NA	Score=557;Name=lod=245	NA	12p12.1	NA	NA	Name=35	NA	rs80243843	NA	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.223739	NA	NA	NA	NA	NA	NA	NA	6
1052	12	25957372	25957372	A	G	intergenic	IFLTD1,MIR4302	dist=155876;dist=69581	NA	NA	ncRNA_exonic	ENSG00000255725	NA	NA	NA	Score=536;Name=lod=202	NA	12p12.1	NA	NA	Name=35	NA	rs78214305	NA	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.264465	NA	NA	NA	NA	NA	0.051	NA	6
1052	13	65533440	65533440	C	T	intergenic	OR7E156P,PCDH9	dist=1216739;dist=1343526	NA	NA	ncRNA_exonic	ENSG00000214269	NA	NA	NA	Score=637;Name=lod=516	NA	13q21.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.69856	NA	NA	NA	NA	NA	NA	NA	6
1052	14	64375794	64375794	C	T	intronic	SYNE2	NA	NA	NA	intronic	ENSG00000054654	NA	NA	NA	NA	NA	14q23.2	NA	NA	Name=27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.644694	NA	NA	NA	NA	NA	NA	NA	6
1052	14	106134672	106134672	G	C	intergenic	TMEM121,ELK2AP	dist=138133;dist=1242	NA	NA	ncRNA_exonic	ENSG00000253755	NA	NA	NA	NA	NA	14q32.33	NA	Name=Pol2	Name=5	NA	rs10144636	0.11	0.11	0.11	NA	NA	NA	NA	NA	NA	0.24	0.01	0.17	0.01	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.325239	1.325239	NA	NA	NA	NA	NA	NA	6
1052	14	106134706	106134706	A	G	intergenic	TMEM121,ELK2AP	dist=138167;dist=1208	NA	NA	ncRNA_exonic	ENSG00000253755	NA	NA	NA	Score=321;Name=lod=27	NA	14q32.33	NA	NA	Name=5	NA	rs10144399	NA	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.963601	NA	NA	NA	NA	NA	0.007	NA	6
1052	15	20445987	20445987	C	T	intergenic	NONE,CHEK2P2	dist=NONE;dist=42010	NA	NA	ncRNA_exonic	ENSG00000258628	NA	NA	NA	Score=451;Name=lod=91	NA	15q11.1	NA	Name=ELF1_(SC-631)	NA	NA	rs4931804	NA	NA	0.061	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.283334	NA	0	NA	NA	ID=COSM147861;OCCURENCE=1(stomach)	0.014	NA	6
1052	15	40476159	40476159	A	G	intronic	BUB1B	NA	NA	NA	intronic	ENSG00000156970	NA	NA	NA	NA	NA	15q15.1	NA	NA	Name=5	NA	NA	NA	NA	NA	0.000199681	NA	NA	0.0014	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.17976	NA	NA	NA	NA	NA	NA	NA	6
1052	15	76039257	76039257	G	T	intergenic	DNM1P35,MIR4313	dist=6839;dist=15299	NA	NA	ncRNA_exonic	ENSG00000260815	NA	NA	NA	Score=684;Name=lod=805	NA	15q24.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.660444	NA	NA	NA	NA	NA	NA	NA	6
1052	16	14530666	14530666	C	A	intronic	PARN	NA	NA	NA	intronic	ENSG00000140694	NA	NA	NA	NA	NA	16p13.12	NA	NA	Name=8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.626384	NA	NA	NA	NA	NA	NA	NA	6
1052	16	33401390	33401390	A	C	intergenic	LOC390705,RNU6-76P	dist=102688;dist=62117	NA	NA	ncRNA_intronic	ENSG00000259882	NA	NA	NA	Score=607;Name=lod=391	NA	16p11.2	NA	NA	Name=9	NA	rs4887621	NA	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.622503	NA	NA	NA	NA	NA	0.304	NA	6
1052	16	33401463	33401463	C	T	intergenic	LOC390705,RNU6-76P	dist=102761;dist=62044	NA	NA	ncRNA_exonic	ENSG00000259882	NA	NA	NA	Score=607;Name=lod=391	NA	16p11.2	NA	NA	Name=9	NA	rs4887702	NA	NA	0.243	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.892679	NA	NA	NA	NA	NA	0.246	NA	6
1052	17	4648409	4648409	C	G	intronic	ZMYND15	NA	NA	NA	intronic	ENSG00000141497	NA	NA	NA	NA	NA	17p13.2	NA	NA	Name=5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.09389	NA	NA	NA	NA	NA	NA	NA	6
1052	17	21308914	21308914	G	T	intronic	KCNJ12,KCNJ18	NA	NA	NA	intronic	ENSG00000184185	NA	NA	NA	NA	NA	17p11.2	NA	Name=PU.1	Name=16	NA	rs1657711	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.545717	NA	NA	NA	NA	NA	0.428	NA	6
1052	18	32459455	32459455	T	C	intronic	DTNA	NA	NA	NA	intronic	ENSG00000134769	NA	NA	NA	NA	NA	18q12.1	Score=913;Name=V$RORA1_01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.944842	NA	NA	NA	NA	NA	NA	NA	6
1052	18	51731587	51731587	C	T	intronic	MBD2	NA	NA	NA	intronic	ENSG00000134046	NA	NA	NA	NA	NA	18q21.2	NA	Name=MafK_(SC-477),MafK_(ab50322)	NA	NA	NA	NA	NA	NA	0.00459265	NA	NA	0.0029	0.0159	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5517	NA	NA	NA	NA	NA	NA	NA	6
1052	19	878537	878537	G	C	intronic	MED16	NA	NA	NA	intronic	ENSG00000175221	NA	NA	NA	Score=620;Name=lod=441	NA	19p13.3	NA	Name=Pol2	NA	NA	rs372596844	NA	NA	0.188	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.542487	NA	NA	NA	NA	NA	NA	NA	6
1052	19	9646758	9646758	C	T	intronic	ZNF426	NA	NA	NA	intronic	ENSG00000130818	NA	NA	NA	NA	NA	19p13.2	NA	Name=BRF2	Name=10	NA	rs77529567	0.03	0.03	0.026	0.0401358	NA	NA	0.0086	0.1475	NA	NA	NA	0.01	0.13	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.831456	NA	NA	NA	NA	NA	0.087	NA	6
1052	19	21752023	21752023	C	G	intergenic	ZNF429,ZNF100	dist=30944;dist=154820	NA	NA	ncRNA_exonic	ENSG00000268081	NA	NA	NA	NA	NA	19p12	NA	Name=NF-YB,NF-YA,Pol2	Name=98	NA	rs73025877	NA	NA	0.248	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.073141	NA	NA	NA	NA	NA	0.029	NA	6
1052	19	42334397	42334397	A	T	intergenic	CEACAM3,LYPD4	dist=18806;dist=6753	NA	NA	ncRNA_exonic	ENSG00000269119	NA	NA	NA	Score=644;Name=lod=550	NA	19q13.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.370661	1.370661	NA	NA	NA	NA	NA	NA	6
1052	20	29874162	29874162	C	T	intergenic	DEFB115,DEFB116	dist=26727;dist=16853	NA	NA	ncRNA_exonic	ENSG00000224628	NA	NA	NA	Score=681;Name=lod=782	NA	20q11.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.008868	NA	NA	NA	NA	NA	NA	NA	6
1052	20	62573697	62573697	A	G	intronic	UCKL1	NA	NA	NA	intronic	ENSG00000198276	NA	NA	NA	NA	NA	20q13.33	NA	Name=ELF1_(SC-631),Pol2(phosphoS2),GABP,IRF1,ELK4	Name=79	NA	rs2427571	0.36	0.36	0.284	NA	NA	NA	NA	NA	NA	0.24	0.43	0.35	0.46	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.125201	NA	NA	NA	NA	NA	NA	NA	6
1052	21	11181645	11181645	G	A	intergenic	BAGE,NONE	dist=82708;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000234643	NA	NA	NA	Score=752;Name=lod=1523	NA	21p11.1	NA	NA	Name=21	NA	rs1815434	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.214147	NA	NA	NA	NA	NA	0.493	NA	6
1052	21	11181697	11181697	G	T	intergenic	BAGE,NONE	dist=82760;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000234643	NA	NA	NA	Score=752;Name=lod=1523	NA	21p11.1	NA	NA	Name=21	NA	rs10439873	NA	NA	0.337	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.118041	NA	NA	NA	NA	NA	NA	NA	6
1052	21	11181699	11181699	C	G	intergenic	BAGE,NONE	dist=82762;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000234643	NA	NA	NA	Score=752;Name=lod=1523	NA	21p11.1	NA	NA	Name=21	NA	rs10439874	NA	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.421102	NA	NA	NA	NA	NA	NA	NA	6
1052	22	16346383	16346383	A	T	intergenic	POTEH,OR11H1	dist=58446;dist=102441	NA	NA	ncRNA_intronic	ENSG00000224435	NA	NA	NA	Score=606;Name=lod=387	NA	22q11.1	NA	NA	Name=2	NA	rs61203019	NA	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.577574	NA	NA	NA	NA	NA	NA	NA	6
1052	22	16346391	16346391	G	A	intergenic	POTEH,OR11H1	dist=58454;dist=102433	NA	NA	ncRNA_intronic	ENSG00000224435	NA	NA	NA	Score=606;Name=lod=387	NA	22q11.1	NA	NA	Name=2	NA	rs8141338	NA	NA	0.442	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.227936	NA	NA	NA	NA	NA	NA	NA	6
1052	22	22759007	22759007	T	G	intergenic	LOC96610,ZNF280B	dist=81683;dist=79765	NA	NA	ncRNA_exonic	ENSG00000253818	NA	NA	NA	Score=336;Name=lod=31	NA	22q11.22	NA	Name=TCF12,PU.1	NA	NA	rs391601	0.6	0.6	0.585	NA	NA	NA	NA	NA	NA	0.59	0.56	0.63	0.62	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.141135	NA	NA	NA	NA	NA	0.623	NA	6
1052	Y	10029711	10029711	A	C	intergenic	TTTY23B,NONE	dist=280140;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000237447	NA	NA	NA	Score=836;Name=lod=3342	NA	Yp11.2	NA	NA	Name=96	NA	rs78505352	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.855026	NA	NA	NA	NA	NA	NA	NA	6
1052	3	37292998	37292998	A	G	intronic	GOLGA4	NA	NA	NA	intronic	ENSG00000144674	NA	NA	NA	NA	NA	3p22.2	NA	Name=MafK_(ab50322)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000008383	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.287258	NA	NA	NA	NA	NA	NA	NA	5.9999916
1052	11	64977484	64977484	C	G	intronic	CAPN1	NA	NA	NA	intronic	ENSG00000014216	NA	NA	NA	NA	NA	11q13.1	NA	NA	Name=2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000008363	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.423951	NA	NA	NA	NA	NA	NA	NA	5.9999916
1052	19	19162420	19162420	A	G	intronic	ARMC6	NA	NA	NA	intronic	ENSG00000105676	NA	NA	NA	NA	NA	19p13.11	NA	Name=CTCF	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000009165	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.06871	NA	NA	NA	NA	NA	NA	NA	5.9999908
1052	2	74656114	74656114	G	A	intronic	RTKN	NA	NA	NA	intronic	ENSG00000114993	NA	NA	NA	NA	NA	2p13.1	NA	NA	Name=2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00001749	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.56256	NA	NA	NA	NA	NA	NA	NA	5.9999825
1052	9	71862907	71862907	G	A	intronic	TJP2	NA	NA	NA	intronic	ENSG00000119139	NA	NA	NA	Score=361;Name=lod=39	NA	9q21.11	Score=881;Name=V$NCX_01	NA	NA	NA	rs372881973	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00002734	0.0002	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5.296122	5.296122	NA	0	0.000227	NA	NA	NA	5.9999727
1052	5	132219300	132219300	T	C	intronic	AFF4	NA	NA	NA	intronic	ENSG00000072364	NA	NA	NA	NA	NA	5q31.1	NA	Name=CTCF	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0000325	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.320151	NA	NA	NA	NA	NA	NA	NA	5.9999675
1052	10	11291207	11291207	G	A	intronic	CELF2	NA	NA	NA	intronic	ENSG00000048740	NA	NA	NA	NA	NA	10p14	NA	NA	Name=4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00005799	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.213779	NA	NA	NA	NA	NA	NA	NA	5.999942
1052	15	42142186	42142186	G	T	intronic	SPTBN5	NA	NA	NA	intronic	ENSG00000137877	NA	NA	NA	NA	NA	15q15.1	NA	NA	Name=11	NA	NA	NA	NA	NA	0.000399361	NA	NA	0.0029	NA	NA	NA	NA	NA	NA	0.00007806	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.34615	NA	NA	NA	NA	NA	0.007	NA	5.9999219
1052	1	144871676	144871676	A	G	intronic	NBPF9,PDE4DIP	NA	NA	NA	intronic	ENSG00000178104	NA	NA	NA	Score=278;Name=lod=18	NA	1q21.1	NA	Name=PU.1	NA	NA	rs368370644	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.588841	2.588841	NA	0.000116	0	NA	NA	NA	5.999884
1052	8	81471344	81471344	G	A	intergenic	ZBTB10,ZNF704	dist=32844;dist=69342	NA	NA	ncRNA_exonic	ENSG00000188856	NA	NA	NA	Score=817;Name=lod=2780	NA	8q21.13	NA	NA	Name=19	NA	rs191150231	0.0005	0.0005	NA	0.000399361	NA	NA	0.0014	0.0008	NA	NA	NA	0.0028	NA	0.0001	0.0028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.324808	1.324808	NA	0.000118	0.00023	NA	NA	NA	5.999782
1052	4	8219990	8219990	G	C	intronic	SH3TC1	NA	NA	NA	intronic	ENSG00000125089	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs185483665	NA	NA	NA	0.00179712	NA	NA	0.0014	0.0061	NA	NA	NA	NA	NA	0.0006	0.0034	0	D	.	.	.	.	.	.	1.000	N	.	.	.	.	-0.971	T	0.070	T	.	-0.183	3.111	-1.89	-0.350	-0.269	1.319	-0.182658	NA	0.26	0.000116	0.003404	NA	0.014	NA	5.999284
1052	6	42016246	42016246	T	C	UTR5	CCND3	NM_001136017:c.-107968A>G,NM_001136126:c.-111827A>G	NA	NA	UTR5	ENSG00000112576	ENST00000372988:c.-107968A>G,ENST00000415497:c.-111827A>G,ENST00000510503:c.-107968A>G,ENST00000508143:c.-111827A>G,ENST00000502771:c.-107968A>G,ENST00000514588:c.-107509A>G	NA	NA	NA	NA	6p21.1	NA	Name=USF-1,USF2,CTCFL_(SC-98982),ZNF263,USF1_(SC-8983),Pol2	Name=111	NA	rs10456506	0.1	0.1	0.086	0.103634	0.0924	0.2569	0.0389	0.0076	0.1329	0.09	0.23	0.05	0.01	0.1302	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.818896	1.818896	NA	0.111614	0.025685	NA	0.08	NA	5.9991194
1052	19	18377496	18377496	C	G	exonic	KIAA1683	NA	nonsynonymous SNV	KIAA1683:NM_001145304:exon3:c.G854C:p.S285T,KIAA1683:NM_001145305:exon3:c.G716C:p.S239T,KIAA1683:NM_025249:exon3:c.G854C:p.S285T	exonic	ENSG00000130518	NA	nonsynonymous SNV	ENSG00000130518:ENST00000392413:exon3:c.G854C:p.S285T,ENSG00000130518:ENST00000600328:exon3:c.G854C:p.S285T,ENSG00000130518:ENST00000600359:exon3:c.G716C:p.S239T	NA	NA	19p13.11	NA	NA	NA	NA	rs8104533	0.53	0.53	0.527	0.544529	0.4294	0.5516	0.5908	0.6929	0.4223	0.43	0.52	0.53	0.69	0.4793	0.69	1	T	0.0	B	0.0	B	0.547	N	1.000	P	-0.895	N	4.18	T	-1.013	T	0.000	T	0.016	-1.755	0.01	1.08	0.078	-0.129	3.398	-1.754861	NA	1	0.425581	0.672265	NA	0.507	NA	5.9990524
1052	7	83634713	83634713	A	G	exonic	SEMA3A	NA	synonymous SNV	SEMA3A:NM_006080:exon11:c.T1302C:p.I434I	exonic	ENSG00000075213	NA	synonymous SNV	ENSG00000075213:ENST00000265362:exon11:c.T1302C:p.I434I,ENSG00000075213:ENST00000436949:exon12:c.T1302C:p.I434I	Score=658;Name=lod=627	NA	7q21.11	NA	NA	NA	NA	rs7804122	0.21	0.21	0.203	0.22524	0.2058	0.1548	0.1729	0.2678	0.2975	0.23	0.15	0.21	0.25	0.2416	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.077472	NA	NA	0.220233	0.262823	ID=COSM1452481;OCCURENCE=1(large_intestine)	0.304	NA	5.9990336
1052	1	149099815	149099815	G	A	intergenic	LOC645166,LOC388692	dist=146761;dist=179661	NA	NA	ncRNA_exonic	ENSG00000179571	NA	NA	NA	NA	NA	1q21.2	NA	Name=PU.1	NA	NA	NA	NA	NA	NA	0.000199681	0.001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.081312	NA	NA	NA	NA	NA	NA	NA	5.999
1052	2	52799643	52799643	C	T	intergenic	NRXN1,ASB3	dist=1539969;dist=1097474	NA	NA	ncRNA_exonic	ENSG00000204993	NA	NA	NA	Score=739;Name=lod=1347	NA	2p16.3	NA	NA	NA	NA	NA	NA	NA	NA	0.000199681	0.001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.175508	NA	NA	NA	NA	NA	NA	NA	5.999
1052	2	133074727	133074727	T	G	intergenic	ANKRD30BL,GPR39	dist=59185;dist=99420	NA	NA	ncRNA_exonic	ENSG00000018607	NA	NA	NA	NA	NA	2q21.2	NA	Name=STAT3	Name=7	NA	rs74763985	NA	NA	0.44	0.000199681	0.001	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.622605	NA	NA	NA	NA	NA	0.5	NA	5.999
1052	3	24188374	24188374	G	A	intronic	THRB	NA	NA	NA	intronic	ENSG00000151090	NA	NA	NA	NA	NA	3p24.2	NA	Name=STAT3	NA	NA	NA	NA	NA	NA	0.000199681	0.001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.300015	NA	NA	NA	NA	NA	NA	NA	5.999
1052	4	146461349	146461349	G	A	intronic	SMAD1	NA	NA	NA	intronic	ENSG00000170365	NA	NA	NA	NA	NA	4q31.21	NA	NA	Name=63	NA	NA	NA	NA	NA	0.00139776	0.001	NA	NA	NA	0.0061	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.742683	NA	NA	NA	NA	NA	NA	NA	5.999
1052	4	170712646	170712646	C	T	intergenic	C4orf27,LOC100506085	dist=33553;dist=126266	NA	NA	ncRNA_exonic	ENSG00000229204	NA	NA	NA	Score=663;Name=lod=658	NA	4q33	NA	NA	NA	NA	NA	NA	NA	NA	0.000599042	0.001	NA	0.0029	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.396903	NA	NA	NA	NA	NA	NA	NA	5.999
1052	6	97052548	97052548	G	A	intronic	FHL5	NA	NA	NA	intronic	ENSG00000112214	NA	NA	NA	NA	NA	6q16.1	NA	Name=EBF	Name=3	NA	rs77872007	0.01	0.01	0.009	0.0113818	0.001	NA	0.0043	0.0386	0.002	0.0013	NA	0.01	0.03	NA	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.666765	NA	NA	NA	NA	NA	0.022	NA	5.999
1052	8	144891658	144891658	C	T	intronic	SCRIB	NA	NA	NA	intronic	ENSG00000180900	NA	NA	NA	NA	NA	8q24.3	NA	NA	Name=3	NA	NA	NA	NA	NA	0.000199681	0.001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.431144	NA	NA	NA	NA	NA	NA	NA	5.999
1052	9	131016842	131016842	G	A	intronic	DNM1	NA	NA	NA	intronic	ENSG00000106976	NA	NA	NA	NA	NA	9q34.11	NA	Name=E2F6_(H-50),ELF1_(SC-631),IRF1	Name=4	NA	rs116177116	0.01	0.01	0.011	0.0133786	0.001	NA	0.0043	0.0469	0.001	NA	NA	0.01	0.03	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.724371	NA	NA	NA	NA	NA	0.014	NA	5.999
1052	12	56628823	56628823	A	G	intronic	SLC39A5	NA	NA	NA	intronic	ENSG00000139540	NA	NA	NA	NA	NA	12q13.3	NA	Name=GATA-2	NA	NA	NA	NA	NA	NA	0.000199681	0.001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.51034	NA	NA	NA	NA	NA	NA	NA	5.999
1052	16	31885357	31885357	C	G	intronic	ZNF267	NA	NA	NA	intronic	ENSG00000185947	NA	NA	NA	NA	NA	16p11.2	NA	Name=YY1_(C-20),Pol2,TAF1,ELF1_(SC-631),Pol2-4H8,YY1,Pol2(b)	NA	NA	NA	NA	NA	NA	0.000399361	0.001	NA	NA	0.0008	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.062929	NA	NA	NA	NA	NA	NA	NA	5.999
1052	17	5036104	5036104	A	C	intronic	USP6	NA	NA	NA	intronic	ENSG00000129204	NA	NA	NA	Score=483;Name=lod=123	NA	17p13.2	NA	Name=CTCF	NA	NA	rs56330904	0.05	0.05	0.066	0.0692891	0.001	NA	0.0115	0.2557	NA	NA	NA	0.02	0.23	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.205543	NA	NA	NA	NA	NA	0.043	NA	5.999
1052	19	3984039	3984039	G	A	intronic	EEF2	NA	NA	NA	intronic	ENSG00000167658	NA	NA	NA	NA	NA	19p13.3	NA	Name=CEBPB	NA	NA	NA	NA	NA	NA	0.000998403	0.001	NA	0.0029	0.0008	0.001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.113014	NA	NA	NA	NA	NA	NA	NA	5.999
1052	20	9389909	9389909	G	C	intronic	PLCB4	NA	NA	NA	intronic	ENSG00000101333	NA	NA	NA	NA	NA	20p12.2	NA	Name=p300	Name=16	NA	rs138006275	0.0037	0.0037	0.003	0.00459265	0.001	NA	0.0043	0.0136	0.001	NA	NA	0.01	0.01	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.268946	1.268946	NA	NA	NA	NA	0.007	NA	5.999
1052	2	105665808	105665808	C	T	exonic	MRPS9	NA	synonymous SNV	MRPS9:NM_182640:exon2:c.C315T:p.D105D	exonic	ENSG00000135972	NA	synonymous SNV	ENSG00000135972:ENST00000258455:exon2:c.C315T:p.D105D	Score=670;Name=lod=702	NA	2q12.1	NA	NA	NA	NA	rs11538197	0.2	0.2	0.179	0.192292	0.2247	0.1101	0.2882	0.2239	0.1329	0.22	0.13	0.26	0.22	0.2024	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.088117	NA	NA	0.240693	0.221036	NA	0.145	NA	5.9988736
1052	1	186031041	186031041	C	T	exonic	HMCN1	NA	synonymous SNV	HMCN1:NM_031935:exon47:c.C7371T:p.C2457C	exonic	ENSG00000143341	NA	synonymous SNV	ENSG00000143341:ENST00000271588:exon47:c.C7371T:p.C2457C,ENSG00000143341:ENST00000367492:exon47:c.C7371T:p.C2457C	Score=545;Name=lod=219	NA	1q31.1	NA	NA	Name=5	NA	rs7522627	0.64	0.64	0.655	0.654353	0.5348	0.5903	0.647	0.8495	0.5849	0.55	0.61	0.62	0.84	0.598	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.804509	NA	NA	0.535116	0.810486	NA	0.667	NA	5.9987506
1052	19	5616061	5616061	G	A	intronic	SAFB2	NA	NA	NA	intronic	ENSG00000130254	NA	NA	NA	NA	NA	19p13.3	NA	NA	Name=28	NA	NA	NA	NA	NA	0.000199681	0.001	NA	NA	NA	NA	NA	NA	NA	NA	0.0003	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.030771	NA	NA	NA	NA	NA	NA	NA	5.9987
1052	1	212588206	212588206	C	G	UTR5	TMEM206	NM_001198862:c.-107G>C,NM_018252:c.-107G>C	NA	NA	UTR5	ENSG00000065600	ENST00000261455:c.-107G>C,ENST00000535273:c.-107G>C	NA	NA	NA	NA	1q32.3	NA	Name=FOXA1_(C-20),E2F4,HMGN3,GABP,TAF1,ETS1,Znf143_(16618-1-AP),Sin3Ak-20,YY1_(C-20),HA-E2F1,TAF7_(SQ-8),HDAC2_(SC-6296),Pol2-4H8,E2F1,Pol2,Mxi1_(bHLH),Pol2(phosphoS2),PAX5-C20,SIX5,Max,ZBTB7A_(SC-34508),c-Myc,CCNT2,ELF1_(SC-631),HEY1,TBP,IRF1,CTCF,p300,Nrf1	Name=147	NA	rs518793	0.23	0.23	0.194	0.191693	0.335	0.1161	0.2406	0.1415	0.1554	0.33	0.11	0.29	0.17	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.576044	1.576044	NA	NA	NA	NA	0.159	NA	5.9983334
1052	6	17706493	17706493	G	A	intronic	NUP153	NA	NA	NA	ncRNA_exonic	ENSG00000272269	NA	NA	NA	NA	NA	6p22.3	NA	Name=HEY1,c-Myc,Max,Oct-2,USF-1,CTCF,E2F6_(H-50),Pol2(b),TAF1,HMGN3,POU2F2,YY1,Pol2,E2F6,Pol2-4H8,Sin3Ak-20	Name=143	NA	rs13219933	0.08	0.08	0.086	0.0948482	0.0974	0.0774	0.134	0.087	0.093	0.09	0.06	0.13	0.06	0.1156	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.056916	NA	NA	0.122005	0.097045	NA	0.072	NA	5.9983283
1052	9	131191332	131191332	G	C	intronic	CERCAM	NA	NA	NA	intronic	ENSG00000167123	NA	NA	NA	NA	NA	9q34.11	NA	Name=HEY1,Pol2-4H8,Pol2(b),Pol2,TAF1	Name=61	NA	rs201116187	NA	NA	NA	0.000998403	NA	NA	0.0014	0.003	NA	NA	NA	NA	NA	0.001	0.0009	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.41839	NA	NA	0.000698	0.000908	NA	NA	NA	5.998302
1052	16	71961483	71961483	G	A	intronic	IST1	NA	NA	NA	intronic	ENSG00000182149	NA	NA	NA	NA	NA	16q22.2	NA	Name=p300,AP-2gamma,JunD,c-Fos,GATA-2,c-Jun	Name=126	NA	rs199547471	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0008	0.0009	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.299273	NA	NA	0.00093	0.000455	NA	NA	NA	5.99827
1052	8	48077038	48077038	C	T	intergenic	LINC00293,LOC100287846	dist=309631;dist=23892	NA	NA	ncRNA_intronic	ENSG00000248347,ENSG00000248531	NA	NA	NA	Score=395;Name=lod=54	NA	8q11.1	NA	NA	NA	NA	NA	NA	NA	0.003	0.00159744	0.002	NA	0.0014	0.0023	0.002	NA	NA	NA	NA	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.727651	NA	NA	NA	NA	NA	0.014	NA	5.998
1052	9	100461756	100461756	C	T	intergenic	XPA,FOXE1	dist=2065;dist=153781	NA	NA	ncRNA_exonic	ENSG00000214417	NA	NA	NA	Score=565;Name=lod=264	NA	9q22.33	NA	NA	Name=17	NA	rs73500398	0.13	0.13	0.113	0.169529	0.002	0.1518	0.1628	0.4213	0.0245	NA	0.11	0.1	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.187491	NA	NA	NA	NA	NA	0.109	NA	5.998
1052	17	73264082	73264082	C	T	intronic	MIF4GD	NA	NA	NA	intronic	ENSG00000125457	NA	NA	NA	NA	NA	17q25.1	NA	Name=Pol2,FOXA2_(SC-6554),FOXA1_(SC-101058),Pol2-4H8,FOXA1_(C-20)	Name=36	NA	rs73356374	0.13	0.13	0.136	0.160543	0.002	0.0992	0.0893	0.4221	0.0838	0.0026	0.06	0.09	0.44	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.081247	2.081247	NA	NA	NA	NA	0.181	NA	5.998
1052	8	163249	163249	T	C	ncRNA_exonic	RPL23AP53	NA	NA	NA	ncRNA_exonic	ENSG00000223508	NA	NA	NA	Score=713;Name=lod=1055	NA	8p23.3	NA	Name=CEBPB	NA	NA	rs2906361	0.5	0.5	0.52	0.499601	0.669	0.5069	0.6888	0.2398	0.5348	0.64	0.44	0.66	0.25	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.959647	NA	NA	NA	NA	NA	0.319	NA	5.9976666
1052	4	125592065	125592065	C	A	exonic	ANKRD50	NA	synonymous SNV	ANKRD50:NM_001167882:exon3:c.G1830T:p.A610A,ANKRD50:NM_020337:exon4:c.G2367T:p.A789A	exonic	ENSG00000151458	NA	synonymous SNV	ENSG00000151458:ENST00000515641:exon3:c.G1830T:p.A610A,ENSG00000151458:ENST00000504087:exon4:c.G2367T:p.A789A	Score=458;Name=lod=97	NA	4q28.1	NA	NA	NA	NA	rs10018651	0.25	0.25	0.243	0.286741	0.2107	0.2619	0.2233	0.3918	0.2935	0.21	0.25	0.2	0.37	0.2495	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.07105	NA	NA	0.209302	0.355878	NA	0.21	NA	5.9971646
1052	1	203152047	203152047	C	T	intronic	CHI3L1	NA	NA	NA	intronic	ENSG00000133048	NA	NA	NA	NA	NA	1q32.1	NA	Name=Pol2	NA	NA	NA	NA	NA	NA	0.000599042	0.003	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.457415	NA	NA	NA	NA	NA	NA	NA	5.997
1052	1	220986465	220986465	G	A	intronic	MARC1	NA	NA	NA	intronic	ENSG00000186205	NA	NA	NA	NA	NA	1q41	NA	Name=Rad21,eGFP-FOS,CTCF,E2F6_(H-50),CTCFL_(SC-98982),CTCF_(SC-5916),SMC3_(ab9263),eGFP-JunD	Name=20	NA	rs76300295	0.02	0.02	0.02	0.024361	0.003	0.0456	0.0086	0.0076	0.0583	0.0026	0.06	0.01	0.01	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.101569	NA	NA	NA	NA	NA	0.007	NA	5.997
1052	2	81425111	81425111	A	G	intergenic	CTNNA2,LOC1720	dist=549123;dist=1658816	NA	NA	ncRNA_exonic	ENSG00000234429	NA	NA	NA	Score=295;Name=lod=21	NA	2p12	NA	NA	NA	NA	NA	NA	NA	NA	0.000599042	0.003	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.276589	NA	NA	NA	NA	NA	0.007	NA	5.997
1052	4	165864505	165864505	G	A	intergenic	LOC100506013,TRIM61	dist=45829;dist=11093	NA	NA	ncRNA_exonic	ENSG00000121089	NA	NA	NA	Score=660;Name=lod=643	NA	4q32.3	NA	NA	Name=11	NA	rs61730550	0.01	0.01	0.006	0.0167732	0.003	NA	0.0029	0.0598	NA	0.0026	NA	0.01	0.03	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.015063	2.015063	0.19	NA	NA	NA	0.007	NA	5.997
1052	6	10695158	10695158	T	C	upstream	C6orf52,PAK1IP1	NA	NA	NA	UTR5	ENSG00000111845	ENST00000379568:c.-61T>C	NA	NA	NA	NA	6p24.2	NA	Name=ELK4,POU2F2,USF2,GABP,E2F6_(H-50),TAF1,GATA-1,SIRT6,BCLAF1_(M33-P5B11),Sin3Ak-20,BRCA1_(C-1863),YY1_(C-20),USF1_(SC-8983),Pol2-4H8,E2F6,HDAC2_(SC-6296),KAP1,MEF2A,SP1,ATF3,Mxi1_(bHLH),Pol2,YY1,PAX5-C20,SIX5,Oct-2,SRF,c-Myc,Max,NFKB,HEY1,ELF1_(SC-631),TBP,CHD2_(N-1250),NF-E2_(H-230),IRF1,USF-1,BHLHE40,p300	Name=148	NA	rs7745856	0.07	0.07	0.084	0.0938498	0.003	0.0387	0.013	0.3003	0.0225	0.0013	0.03	0.01	0.27	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.014034	NA	NA	NA	NA	NA	0.101	NA	5.997
1052	7	6976199	6976199	C	G	intergenic	CCZ1B,LOC100131257	dist=110273;dist=139202	NA	NA	ncRNA_exonic	ENSG00000242731	NA	NA	NA	Score=517;Name=lod=168	NA	7p22.1	NA	NA	NA	NA	NA	NA	NA	NA	0.00139776	0.003	NA	NA	0.0023	0.001	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.072503	NA	NA	NA	NA	NA	0.007	NA	5.997
1052	6	25849620	25849620	A	G	exonic	SLC17A3	NA	synonymous SNV	SLC17A3:NM_006632:exon10:c.T1110C:p.S370S,SLC17A3:NM_001098486:exon11:c.T1344C:p.S448S	exonic	ENSG00000124564	NA	synonymous SNV	ENSG00000124564:ENST00000505420:exon1:c.T3C:p.S1S,ENSG00000124564:ENST00000360657:exon10:c.T1110C:p.S370S,ENSG00000124564:ENST00000361703:exon10:c.T1110C:p.S370S,ENSG00000124564:ENST00000397060:exon11:c.T1344C:p.S448S	NA	NA	6p22.2	NA	NA	NA	NA	rs942379	0.73	0.73	0.718	0.703075	0.5388	0.8105	0.6902	0.9198	0.4775	0.54	0.83	0.68	0.92	0.6019	0.92	.	.	.	.	.	.	.	.	0.015	P	.	.	.	.	-1.018	T	0.031	T	.	0.095	4.51	-0.836	-0.075	-1.080	4.030	0.094579	NA	NA	0.529419	0.85429	NA	0.616	NA	5.9965476
1052	4	125591687	125591687	A	G	exonic	ANKRD50	NA	synonymous SNV	ANKRD50:NM_001167882:exon3:c.T2208C:p.N736N,ANKRD50:NM_020337:exon4:c.T2745C:p.N915N	exonic	ENSG00000151458	NA	synonymous SNV	ENSG00000151458:ENST00000515641:exon3:c.T2208C:p.N736N,ENSG00000151458:ENST00000504087:exon4:c.T2745C:p.N915N	Score=512;Name=lod=160	NA	4q28.1	NA	NA	NA	NA	rs3733471	0.26	0.26	0.241	0.28734	0.2107	0.2629	0.2233	0.3933	0.2935	0.21	0.25	0.2	0.37	0.2499	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.006225	NA	NA	0.209651	0.356559	NA	0.217	NA	5.9964156
1052	17	27052263	27052263	G	A	intronic	TLCD1	NA	NA	NA	intronic	ENSG00000160606	NA	NA	NA	NA	NA	17q11.2	NA	Name=HEY1,CCNT2,ZNF263,KAP1,Pol2-4H8,EBF,eGFP-JunB,Pol2(b),CTCF,eGFP-HDAC8,Pol2(phosphoS2),Pol2	Name=146	NA	rs138741909	0.0009	0.0009	0	0.000399361	0.002	NA	NA	NA	NA	0.0026	NA	NA	NA	NA	0.0026	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.134221	NA	NA	0.001886	0	NA	NA	NA	5.996114
1052	3	46713457	46713457	C	G	exonic	ALS2CL	NA	synonymous SNV	ALS2CL:NM_182775:exon9:c.G642C:p.T214T,ALS2CL:NM_001190707:exon24:c.G2601C:p.T867T,ALS2CL:NM_147129:exon24:c.G2601C:p.T867T	exonic	ENSG00000178038	NA	synonymous SNV	ENSG00000178038:ENST00000383742:exon9:c.G642C:p.T214T,ENSG00000178038:ENST00000318962:exon24:c.G2601C:p.T867T,ENSG00000178038:ENST00000415953:exon24:c.G2601C:p.T867T	NA	NA	3p21.31	Score=715;Name=V$BRACH_01	NA	NA	NA	rs7625303	0.27	0.27	0.227	0.250399	0.2197	0.38	0.2968	0.1483	0.2536	0.21	0.38	0.32	0.2	0.236	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.207581	NA	NA	0.214884	0.164094	NA	0.297	NA	5.9960826
1052	2	95403675	95403675	G	T	intergenic	NONE,FAM95A	dist=NONE;dist=17396	NA	NA	ncRNA_exonic	ENSG00000213355	NA	NA	NA	Score=674;Name=lod=729	NA	2q11.1	NA	NA	NA	NA	NA	NA	NA	NA	0.00119808	0.004	NA	0.0014	0.0008	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.116838	NA	NA	NA	NA	NA	NA	NA	5.996
1052	19	11221506	11221506	A	C	intronic	LDLR	NA	NA	NA	intronic	ENSG00000130164	NA	NA	NA	NA	NA	19p13.2	NA	Name=Pol2-4H8,Pol2(b)	Name=3	NA	rs55642005	0.0014	0.0014	NA	0.00159744	0.004	NA	0.0029	0.0008	0.001	0.0013	NA	0.0028	0.002	NA	0.0028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.070737	NA	NA	NA	NA	NA	NA	NA	5.996
1052	5	73072354	73072354	T	C	exonic	ARHGEF28	NA	nonsynonymous SNV	ARHGEF28:NM_001080479:exon6:c.T673C:p.W225R,ARHGEF28:NM_001177693:exon6:c.T673C:p.W225R	exonic	ENSG00000214944	NA	nonsynonymous SNV	ENSG00000214944:ENST00000426542:exon5:c.T673C:p.W225R,ENSG00000214944:ENST00000437974:exon5:c.T673C:p.W225R,ENSG00000214944:ENST00000287898:exon6:c.T673C:p.W225R,ENSG00000214944:ENST00000296794:exon6:c.T673C:p.W225R,ENSG00000214944:ENST00000513042:exon6:c.T673C:p.W225R,ENSG00000214944:ENST00000545377:exon6:c.T673C:p.W225R	NA	NA	5q13.2	NA	NA	NA	NA	rs7714670	0.38	0.38	0.345	0.370407	0.4573	0.3194	0.366	0.3381	0.3804	0.46	0.3	0.37	0.34	0.4284	0.46	0.9	T	0.0	B	0.0	B	.	.	1.000	P	-1.5	N	3.38	T	-0.947	T	0.000	T	0.067	-2.171	0.005	0.823	0.151	0.228	4.501	-2.170811	NA	0.87	0.452076	0.358504	ID=COSM450035,COSM450036;OCCURENCE=1(breast)	0.326	NA	5.9955574
1052	21	40250776	40250776	C	A	intergenic	ETS2,PSMG1	dist=53898;dist=296596	NA	NA	ncRNA_exonic	ENSG00000205622	NA	NA	NA	NA	NA	21q22.2	NA	Name=STAT3,CEBPB	Name=27	NA	rs115935343	0.01	0.01	0.01	0.0145767	NA	NA	0.0058	0.0522	NA	NA	NA	0.0028	0.04	0.0045	0.045	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.051457	NA	NA	0.000489	0.044715	NA	0.022	NA	5.995011
1052	19	13080308	13080308	C	T	upstream	DAND5	NA	NA	NA	UTR5	ENSG00000179284	ENST00000317060:c.-167C>T	NA	NA	NA	NA	19p13.2	NA	Name=Egr-1	Name=32	NA	rs73006806	0.0037	0.0037	0.003	0.00439297	0.005	NA	0.0043	0.0008	0.0133	0.01	NA	0.0028	0.002	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.162821	NA	NA	NA	NA	NA	0.007	NA	5.995
1053	22	30891250	30891250	T	C	exonic	SEC14L4	NA	synonymous SNV	SEC14L4:NM_001161368:exon5:c.A414G:p.Q138Q,SEC14L4:NM_174977:exon5:c.A414G:p.Q138Q	exonic	ENSG00000133488	NA	synonymous SNV	ENSG00000133488:ENST00000255858:exon5:c.A414G:p.Q138Q,ENSG00000133488:ENST00000381982:exon5:c.A414G:p.Q138Q,ENSG00000133488:ENST00000392772:exon5:c.A252G:p.Q84Q,ENSG00000133488:ENST00000540456:exon6:c.A369G:p.Q123Q	Score=317;Name=lod=26	NA	22q12.2	NA	NA	NA	NA	rs9606738	0.16	0.16	0.125	0.160343	0.2296	0.0397	0.2867	0.1505	0.137	0.22	0.04	0.23	0.16	0.2158	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.096097	NA	NA	0.226512	0.166137	NA	0.08	NA	5.9947546
1053	19	39224317	39224317	C	T	intronic	CAPN12	NA	NA	NA	intronic	ENSG00000182472	NA	NA	NA	NA	NA	19q13.2	NA	Name=Pol2-4H8,c-Fos,Pol2	Name=50	NA	rs117235339	0.0014	0.0014	0.003	0.00638978	0.002	NA	0.0014	NA	0.0297	0.0026	NA	0.0028	NA	0.0031	0.0028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.647704	NA	NA	0.000349	0	NA	NA	NA	5.994551
1053	18	47021662	47021662	G	A	intergenic	RPL17-C18orf32,LIPG	dist=2727;dist=66765	NA	NA	ncRNA_exonic	ENSG00000265182	NA	NA	NA	Score=628;Name=lod=475	NA	18q21.1	NA	NA	Name=4	NA	rs186011163	0.0014	0.0014	NA	0.00159744	0.006	NA	0.0029	NA	NA	0.004	NA	NA	NA	NA	0.004	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.084509	2.084509	NA	NA	NA	NA	NA	NA	5.994
1053	3	10302172	10302172	G	A	exonic	TATDN2	NA	nonsynonymous SNV	TATDN2:NM_014760:exon3:c.G766A:p.V256I	exonic	ENSG00000157014,ENSG00000272410	NA	nonsynonymous SNV	ENSG00000272410:ENST00000437082:exon2:c.G595A:p.V199I,ENSG00000157014:ENST00000287652:exon3:c.G766A:p.V256I,ENSG00000157014:ENST00000448281:exon3:c.G766A:p.V256I	NA	NA	3p25.3	NA	NA	NA	NA	rs394558	0.56	0.56	0.557	0.596246	0.4304	0.9643	0.4207	0.3737	0.8129	0.41	0.98	0.43	0.4	0.5061	0.98	0.75	T	0.027	B	0.006	B	0.383	N	1.000	P	1.61	L	1.81	T	-0.946	T	0.000	T	0.052	-0.034	3.84	0.786	0.055	0.634	5.504	-0.034032	NA	0.4	0.403023	0.373808	NA	0.58	NA	5.9938104
1053	14	50769717	50769717	G	A	exonic	L2HGDH	NA	synonymous SNV	L2HGDH:NM_024884:exon2:c.C159T:p.I53I	exonic	ENSG00000087299	NA	synonymous SNV	ENSG00000087299:ENST00000261699:exon2:c.C159T:p.I53I,ENSG00000087299:ENST00000267436:exon2:c.C159T:p.I53I,ENSG00000087299:ENST00000421284:exon2:c.C159T:p.I53I,ENSG00000087299:ENST00000555423:exon2:c.C159T:p.I53I,ENSG00000087299:ENST00000555610:exon2:c.C159T:p.I53I	Score=428;Name=lod=73	NA	14q21.3	Score=936;Name=V$TCF11_01	NA	NA	NA	rs2297995	0.57	0.57	0.592	0.596645	0.5477	0.6468	0.5317	0.6407	0.5818	0.55	0.63	0.49	0.61	0.5701	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.143429	NA	NA	0.555116	0.611666	NA	0.536	NA	5.9937506
1053	14	101447373	101447373	T	C	ncRNA_exonic	SNORD114-20	NA	NA	NA	ncRNA_exonic	ENSG00000202048	NA	NA	NA	NA	NA	14q32.31	NA	Name=FOSL2,JunD	Name=5	NA	rs34158896	0.13	0.13	0.115	0.107029	0.2425	0.0694	0.1383	0.0106	0.1145	0.24	0.06	0.17	0.01	0.1738	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.197751	NA	NA	0.256655	0.058219	NA	0.217	NA	5.9937116
1053	17	41167957	41167957	C	A	UTR3	VAT1	NM_006373:c.*121G>T	NA	NA	splicing	ENSG00000108828	ENST00000592388:exon3:c.211+1G>T	NA	NA	Score=259;Name=lod=15	NA	17q21.31	NA	NA	Name=34	NA	rs455055	0.67	0.67	0.665	0.625	0.673	0.9177	0.7118	0.2844	0.6728	0.68	0.94	0.68	0.32	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.17941	NA	NA	NA	NA	NA	0.659	NA	5.9936667
1053	22	18189469	18189469	G	A	UTR5	BCL2L13	NM_001270733:c.-20214G>A	NA	NA	intronic	ENSG00000099968	NA	NA	NA	NA	NA	22q11.21	NA	Name=TBP,MafK_(ab50322),STAT3,RFX5_(N-494),Pol2-4H8,c-Fos,ZNF263,c-Jun,EBF,Pol2(b),JunD,EBF1_(C-8),p300,Rad21,PU.1,Pol2,TAF1,USF2	Name=144	NA	rs2587086	0.1	0.1	0.082	0.0726837	0.173	0.004	0.1326	0.0265	0.0603	0.19	0.0035	0.14	0.03	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.335729	NA	NA	NA	NA	NA	0.138	NA	5.9936667
1053	12	125441359	125441359	T	C	exonic	DHX37	NA	synonymous SNV	DHX37:NM_032656:exon18:c.A2331G:p.T777T	exonic	ENSG00000150990	NA	synonymous SNV	ENSG00000150990:ENST00000544745:exon15:c.A1692G:p.T564T,ENSG00000150990:ENST00000308736:exon18:c.A2331G:p.T777T	NA	NA	12q24.31	Score=798;Name=V$OLF1_01	NA	NA	NA	rs10773127	0.35	0.35	0.391	0.380192	0.2058	0.2034	0.2536	0.8533	0.1922	0.2	0.19	0.24	0.85	0.2555	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.341163	NA	NA	0.211744	0.760781	ID=COSM287884;OCCURENCE=1(large_intestine)	0.529	NA	5.9936226
1053	8	124664130	124664130	C	T	exonic	KLHL38	NA	nonsynonymous SNV	KLHL38:NM_001081675:exon1:c.G1037A:p.R346K	exonic	ENSG00000175946	NA	nonsynonymous SNV	ENSG00000175946:ENST00000325995:exon1:c.G1037A:p.R346K	NA	NA	8q24.13	NA	NA	NA	NA	rs11780509	0.72	0.72	0.741	0.706869	0.8022	0.7113	0.6902	0.6604	0.6789	0.8	0.7	0.69	0.64	0.749	0.8	1	T	0.0	B	0.001	B	0.050	N	1.000	P	0	N	-0.17	T	-0.951	T	0.000	T	0.003	0.343	5.86	-0.060	0.034	1.274	4.716	0.34283	NA	1	0.788663	0.709091	NA	0.812	NA	5.9934704
1053	1	155295003	155295003	G	C	intronic	RUSC1	NA	NA	NA	intronic	ENSG00000160753	NA	NA	NA	NA	NA	1q22	NA	Name=ELF1_(SC-631),Rad21,BCL3,IRF1,CTCF,ELK4,GATA-1,E2F6_(H-50),YY1_(C-20),GATA3_(SC-268),CTCF_(SC-5916),Pol2,NRSF,Ini1,SMC3_(ab9263)	Name=84	NA	rs12087231	0.02	0.02	0.015	0.0285543	NA	NA	0.0043	0.1059	NA	NA	NA	0.01	0.08	0.0063	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.463494	NA	NA	0.000233	0.063096	NA	0.029	NA	5.993467
1053	7	151200567	151200567	C	T	intronic	RHEB	NA	NA	NA	intronic	ENSG00000106615	NA	NA	NA	Score=859;Name=lod=4131	NA	7q36.1	NA	NA	Name=4	NA	rs181887983	0.0037	0.0037	NA	0.00299521	0.007	NA	0.0072	0.0008	0.002	0.01	NA	0.01	0.002	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.431593	NA	NA	NA	NA	NA	0.007	NA	5.993
1053	4	166021811	166021811	G	C	exonic	TMEM192	NA	synonymous SNV	TMEM192:NM_001100389:exon3:c.C408G:p.L136L	exonic	ENSG00000170088	NA	synonymous SNV	ENSG00000170088:ENST00000306480:exon3:c.C408G:p.L136L,ENSG00000170088:ENST00000506087:exon4:c.C396G:p.L132L	Score=336;Name=lod=31	NA	4q32.3	NA	NA	NA	NA	rs6536890	0.35	0.35	0.39	0.35024	0.1928	0.3651	0.2334	0.6263	0.2065	0.18	0.36	0.23	0.66	0.2595	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.314666	NA	NA	0.221576	0.532464	NA	0.341	NA	5.9927906
1053	7	100485303	100485303	C	T	intronic	SRRT	NA	NA	NA	intronic	ENSG00000087087	NA	NA	NA	NA	NA	7q22.1	NA	Name=Pol2,PU.1,NRSF,IRF4_(M-17),E2F6,TAF1,Pol2-4H8,ZBTB7A_(SC-34508)	Name=44	NA	rs201504096	0.0009	0.0009	NA	0.000599042	0.002	NA	NA	0.0008	NA	0.0026	NA	NA	NA	0.0013	0.0041	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.69799	NA	NA	0.00407	0.000454	NA	NA	NA	5.99263
1053	19	38800165	38800165	C	T	exonic	YIF1B	NA	synonymous SNV	YIF1B:NM_033557:exon1:c.G84A:p.L28L,YIF1B:NM_001039671:exon2:c.G132A:p.L44L,YIF1B:NM_001039672:exon2:c.G177A:p.L59L,YIF1B:NM_001039673:exon2:c.G168A:p.L56L,YIF1B:NM_001145461:exon2:c.G126A:p.L42L,YIF1B:NM_001145462:exon2:c.G84A:p.L28L,YIF1B:NM_001145463:exon2:c.G168A:p.L56L	exonic	ENSG00000167645	NA	synonymous SNV	ENSG00000167645:ENST00000392124:exon1:c.G84A:p.L28L,ENSG00000167645:ENST00000592246:exon1:c.G84A:p.L28L,ENSG00000167645:ENST00000329420:exon2:c.G132A:p.L44L,ENSG00000167645:ENST00000337679:exon2:c.G168A:p.L56L,ENSG00000167645:ENST00000339413:exon2:c.G177A:p.L59L,ENSG00000167645:ENST00000587039:exon2:c.G84A:p.L28L,ENSG00000167645:ENST00000589247:exon2:c.G126A:p.L42L,ENSG00000167645:ENST00000591755:exon2:c.G168A:p.L56L,ENSG00000167645:ENST00000591784:exon2:c.G84A:p.L28L,ENSG00000167645:ENST00000592694:exon2:c.G84A:p.L28L	Score=366;Name=lod=41	NA	19q13.2	NA	NA	NA	NA	rs3900981	0.23	0.23	0.189	0.222045	0.2296	0.2331	0.3213	0.1407	0.2423	0.23	0.25	0.31	0.15	0.248	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.971973	NA	NA	0.197463	0.164244	NA	0.152	NA	5.9916036
1053	21	37541979	37541979	C	G	intronic	DOPEY2	NA	NA	NA	ncRNA_exonic	ENSG00000228149	NA	NA	NA	Score=831;Name=lod=3173	NA	21q22.12	NA	NA	Name=2	NA	rs2835292	0.37	0.37	0.348	0.411342	0.3419	0.3938	0.2738	0.4607	0.5317	0.35	0.39	0.28	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.047766	NA	NA	NA	NA	NA	0.283	NA	5.9914333
1053	21	37542389	37542389	C	G	intronic	DOPEY2	NA	NA	NA	ncRNA_exonic	ENSG00000228149	NA	NA	NA	Score=831;Name=lod=3173	NA	21q22.12	NA	Name=CTCF	NA	NA	rs4817785	0.37	0.37	0.368	0.411142	0.3419	0.3938	0.2738	0.4607	0.5307	0.35	0.39	0.28	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.076817	NA	NA	NA	NA	NA	0.29	NA	5.9914333
1053	7	1478576	1478576	G	A	exonic	MICALL2	NA	synonymous SNV	MICALL2:NM_182924:exon10:c.C2022T:p.D674D	exonic	ENSG00000164877	NA	nonsynonymous SNV	ENSG00000164877:ENST00000413446:exon9:c.C1892T:p.T631M	NA	NA	7p22.3	NA	NA	NA	NA	rs61736386	0.02	0.02	0.014	0.0231629	NA	NA	0.0043	0.0673	0.0245	NA	NA	0.01	0.08	0.0085	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.034728	NA	0.15	0.000116	0.051544	NA	0.029	NA	5.991384
1053	14	75413068	75413068	G	C	intronic	PGF	NA	NA	NA	intronic	ENSG00000119630	NA	NA	NA	NA	NA	14q24.3	NA	Name=CTCF,Pol2,TAF7_(SQ-8)	Name=134	NA	rs182766382	0.0014	0.0014	NA	0.000599042	0.001	NA	0.0029	NA	NA	NA	NA	0.01	NA	0.0026	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.250052	2.250052	NA	0.005814	0.000908	NA	NA	NA	5.990586
1053	19	54120122	54120122	C	T	intergenic	LOC284379,DPRX	dist=13371;dist=15188	NA	NA	ncRNA_exonic	ENSG00000269608	NA	NA	NA	Score=699;Name=lod=926	NA	19q13.42	NA	Name=HEY1	NA	NA	rs148541481	0.01	0.01	0.005	0.00339457	0.0099	NA	0.0072	0.0008	0.001	0.01	NA	0.01	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.516554	NA	NA	NA	NA	NA	0.014	NA	5.9901
1053	20	24930085	24930085	G	A	UTR5	CST7	NM_003650:c.-57G>A	NA	NA	exonic	ENSG00000077984	NA	nonsynonymous SNV	ENSG00000077984:ENST00000376835:exon1:c.G10A:p.E4K	NA	NA	20p11.21	NA	NA	NA	NA	rs227653	0.1	0.1	0.102	0.0842652	0.1183	0.0605	0.1066	0.0711	0.0757	0.11	0.07	0.14	0.08	0.0991	0.14	0	D	.	.	.	.	.	.	1.000	P	.	.	2.9	T	-1.032	T	0.000	T	0.105	1.198	9.869	0.436	0.468	0.000	.	1.198486	NA	0	0.126308	0.102587	NA	0.058	NA	5.9896254
1053	17	26105932	26105932	G	A	exonic	NOS2	NA	synonymous SNV	NOS2:NM_000625:exon10:c.C1155T:p.D385D	exonic	ENSG00000007171	NA	synonymous SNV	ENSG00000007171:ENST00000313735:exon10:c.C1155T:p.D385D	NA	NA	17q11.2	Score=810;Name=V$CEBP_C	NA	NA	NA	rs1137933	0.2	0.2	0.184	0.194489	0.2445	0.1736	0.1974	0.1815	0.18	0.24	0.15	0.22	0.2	0.207	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.218846	NA	NA	0.225581	0.187018	NA	0.225	NA	5.9895856
1053	2	160885418	160885418	G	C	exonic	PLA2R1	NA	nonsynonymous SNV	PLA2R1:NM_001007267:exon5:c.C898G:p.H300D,PLA2R1:NM_001195641:exon5:c.C898G:p.H300D,PLA2R1:NM_007366:exon5:c.C898G:p.H300D	exonic	ENSG00000153246	NA	nonsynonymous SNV	ENSG00000153246:ENST00000283243:exon5:c.C898G:p.H300D,ENSG00000153246:ENST00000392771:exon5:c.C898G:p.H300D	NA	NA	2q24.2	NA	NA	NA	NA	rs35771982	0.32	0.32	0.287	0.250998	0.4702	0.3532	0.268	0.0371	0.1973	0.48	0.35	0.3	0.05	0.3852	0.49	0.64	T	0.0	B	0.0	B	0.583	N	1.000	P	-0.625	N	2.46	T	-0.932	T	0.000	T	0.03	-1.576	0.014	-0.954	-0.102	-0.203	5.478	-1.576005	NA	0.66	0.488372	0.100318	NA	0.232	NA	5.9895614
1053	19	14676222	14676222	G	T	intronic	TECR	NA	NA	NA	intronic	ENSG00000099797	NA	NA	NA	NA	NA	19p13.12	NA	Name=ZBTB33	Name=2	NA	rs73002862	0.0041	0.0041	0.003	0.00239617	0.0109	NA	NA	0.0008	NA	0.01	NA	0.0028	0.0041	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.478123	1.478123	NA	NA	NA	NA	0.051	NA	5.9891
1053	9	127764305	127764305	G	A	exonic	SCAI	NA	synonymous SNV	SCAI:NM_001144877:exon12:c.C1083T:p.S361S,SCAI:NM_173690:exon13:c.C1152T:p.S384S	exonic	ENSG00000173611	NA	synonymous SNV	ENSG00000173611:ENST00000336505:exon12:c.C1083T:p.S361S,ENSG00000173611:ENST00000477186:exon12:c.C1083T:p.S361S,ENSG00000173611:ENST00000373549:exon13:c.C1152T:p.S384S	Score=596;Name=lod=351	NA	9q33.3	NA	NA	NA	NA	rs764304	0.16	0.16	0.156	0.152756	0.2555	0.1121	0.1138	0.0877	0.2045	0.26	0.1	0.12	0.1	0.1931	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.029889	NA	NA	0.229733	0.096215	ID=COSM150715;OCCURENCE=1(stomach)	0.123	NA	5.9883336
1053	17	4872434	4872434	C	T	intronic	CAMTA2	NA	NA	NA	intronic	ENSG00000108509	NA	NA	NA	NA	NA	17p13.2	NA	Name=TAF1,Pol2(phosphoS2),Pol2	Name=123	NA	rs60210082	0.02	0.02	0.024	0.0313498	0.001	NA	0.0058	0.115	NA	0.0013	NA	0.0028	0.09	0.0102	0.095	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.120257	NA	NA	0.000582	0.095271	NA	0.058	NA	5.988218
1053	10	108412370	108412370	T	A	intronic	SORCS1	NA	NA	NA	intronic	ENSG00000108018	NA	NA	NA	NA	NA	10q25.1	NA	Name=STAT3,NFKB,BCL11A	Name=9	NA	rs74382777	0.01	0.01	0.004	0.00499201	0.0119	0.001	0.0144	NA	0.002	0.01	0.0017	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.552133	NA	NA	NA	NA	NA	NA	NA	5.9881
1053	13	21834975	21834975	G	A	intergenic	MRP63,MIPEPP3	dist=81755;dist=37289	NA	NA	ncRNA_exonic	ENSG00000235438	NA	NA	NA	Score=818;Name=lod=2806	NA	13q12.11	NA	NA	NA	NA	NA	NA	NA	NA	0.00459265	0.0119	NA	0.0086	NA	0.0051	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.154076	NA	NA	NA	NA	NA	NA	NA	5.9881
1053	13	29004064	29004064	C	T	intronic	FLT1	NA	NA	NA	intronic	ENSG00000102755	NA	NA	NA	NA	NA	13q12.3	NA	Name=NFKB,Pol2-4H8,Pol2,TAF1	Name=37	NA	rs45496898	0.01	0.01	0.007	0.00399361	0.0119	NA	0.0086	0.0008	0.001	0.01	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.300411	1.300411	NA	NA	NA	NA	NA	NA	5.9881
1053	6	32904981	32904981	G	A	exonic	HLA-DMB	NA	nonsynonymous SNV	HLA-DMB:NM_002118:exon3:c.C590T:p.T197I	exonic	ENSG00000242574	NA	nonsynonymous SNV	ENSG00000242574:ENST00000438510:exon1:c.C236T:p.T79I,ENSG00000242574:ENST00000416244:exon3:c.C590T:p.T197I,ENSG00000242574:ENST00000418107:exon3:c.C590T:p.T197I	NA	NA	6p21.32	Score=847;Name=V$GR_Q6	NA	NA	NA	rs1042337	0.76	0.76	0.779	0.784545	0.7883	0.7232	0.732	0.8132	0.8425	0.79	0.68	0.71	0.84	0.7833	0.84	0.22	T	0.0	B	0.001	B	0.428	N	1.000	P	.	.	4.1	T	-0.904	T	0.002	T	0.26	-0.059	3.716	-0.903	-0.185	-0.794	4.607	-0.05861	NA	0.17	0.773837	0.817975	NA	0.79	NA	5.9878964
1053	13	45914835	45914835	C	G	intronic	TPT1	NA	NA	NA	intronic	ENSG00000133112	NA	NA	NA	NA	NA	13q14.13	NA	Name=Ini1,Egr-1,CTCF_(SC-5916),Pol2-4H8,E2F1,HA-E2F1,HSF1,GATA2_(CG2-96),TBP,HEY1,ZBTB7A_(SC-34508),c-Myc,CCNT2,CTCF_(C-20),Pol2,MEF2A,eGFP-JunD,YY1_(C-20),TAF1,ETS1,HMGN3,GABP,CTCF,CEBPB,Rad21,Max,STAT1	Name=148	NA	rs2234217	NA	NA	NA	0.00339457	0.004	NA	0.0014	NA	0.0123	NA	NA	NA	NA	0.0047	0.0035	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.650359	1.650359	NA	0.003488	0.000227	NA	NA	NA	5.987812
1053	8	97605800	97605800	C	T	exonic	SDC2	NA	synonymous SNV	SDC2:NM_002998:exon2:c.C153T:p.Y51Y	exonic	ENSG00000169439	NA	synonymous SNV	ENSG00000169439:ENST00000302190:exon2:c.C153T:p.Y51Y,ENSG00000169439:ENST00000519914:exon2:c.C66T:p.Y22Y,ENSG00000169439:ENST00000521590:exon2:c.C66T:p.Y22Y,ENSG00000169439:ENST00000522911:exon2:c.C66T:p.Y22Y,ENSG00000169439:ENST00000523877:exon2:c.C66T:p.Y22Y	Score=374;Name=lod=44	NA	8q22.1	NA	NA	NA	NA	rs1126681	0.21	0.21	0.203	0.226038	0.2217	0.3591	0.1628	0.0484	0.3783	0.24	0.31	0.17	0.07	0.2371	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.298134	NA	NA	0.220233	0.082161	ID=COSM150508;OCCURENCE=1(stomach),1(prostate)	0.123	NA	5.9876336
1053	18	55505862	55505862	C	T	intergenic	ATP8B1,NEDD4L	dist=35535;dist=205748	NA	NA	ncRNA_exonic	ENSG00000231544	NA	NA	NA	Score=694;Name=lod=878	NA	18q21.31	NA	Name=NFKB	NA	NA	rs576180	0.02	0.02	0.021	0.0305511	0.0129	NA	0.0086	0.1006	0.001	0.01	NA	0.01	0.09	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.315798	NA	NA	NA	NA	NA	0.022	NA	5.9871
1053	22	37603021	37603021	G	A	exonic	SSTR3	NA	synonymous SNV	SSTR3:NM_001051:exon2:c.C822T:p.Y274Y	exonic	ENSG00000183473	NA	synonymous SNV	ENSG00000183473:ENST00000328544:exon2:c.C822T:p.Y274Y,ENSG00000183473:ENST00000402501:exon2:c.C822T:p.Y274Y	Score=585;Name=lod=319	NA	22q13.1	NA	NA	NA	NA	rs2071710	0.34	0.34	0.342	0.3123	0.2197	0.5863	0.3069	0.2005	0.2802	0.22	0.63	0.3	0.2	0.2577	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.742272	NA	NA	0.202442	0.184294	NA	0.217	NA	5.9868246
1053	17	73811138	73811138	G	A	intronic	UNK	NA	NA	NA	intronic	ENSG00000132478	NA	NA	NA	NA	NA	17q25.1	NA	Name=c-Fos	Name=104	NA	rs147645780	0.01	0.01	0.005	0.00459265	0.0139	NA	0.0101	NA	0.002	0.01	NA	0.01	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.140096	NA	NA	NA	NA	NA	0.022	NA	5.9861
1053	15	43028592	43028592	G	A	exonic	CDAN1	NA	synonymous SNV	CDAN1:NM_138477:exon2:c.C477T:p.P159P	exonic	ENSG00000140326	NA	synonymous SNV	ENSG00000140326:ENST00000356231:exon2:c.C477T:p.P159P	NA	NA	15q15.2	NA	Name=Egr-1	NA	NA	rs7167392	0.21	0.21	0.234	0.260583	0.2227	0.0546	0.1427	0.4365	0.3579	0.24	0.07	0.15	0.36	0.2472	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.266969	1.266969	NA	0.21139	0.381325	NA	0.196	NA	5.9853766
1053	4	37836302	37836302	T	C	exonic	PGM2	NA	synonymous SNV	PGM2:NM_018290:exon3:c.T312C:p.S104S	exonic	ENSG00000169299	NA	synonymous SNV	ENSG00000169299:ENST00000381967:exon3:c.T312C:p.S104S,ENSG00000169299:ENST00000505986:exon3:c.T312C:p.S104S,ENSG00000169299:ENST00000515668:exon3:c.T312C:p.S104S	Score=446;Name=lod=87	NA	4p14	NA	NA	NA	NA	rs3752683	0.32	0.32	0.324	0.34385	0.2167	0.2748	0.2781	0.6755	0.1442	0.21	0.24	0.27	0.64	0.2488	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.790076	NA	NA	0.215814	0.615297	NA	0.413	NA	5.9853526
1053	14	104165411	104165411	G	A	intronic	KLC1,XRCC3	NA	NA	NA	intronic	ENSG00000126214,ENSG00000126215	NA	NA	NA	NA	NA	14q32.33	NA	Name=HA-E2F1,Pol2-4H8,c-Myc,Pol2	Name=22	NA	rs17101777	NA	NA	0.01	0.00139776	0.006	NA	NA	NA	0.001	NA	NA	NA	NA	NA	0.0088	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.545201	NA	NA	0.008799	0	NA	NA	NA	5.985201
1053	11	75507214	75507214	T	G	intronic	DGAT2	NA	NA	NA	intronic	ENSG00000062282	NA	NA	NA	NA	NA	11q13.5	NA	Name=TAF1	Name=7	NA	rs41302443	0.0046	0.0046	NA	0.00479233	0.0149	NA	0.0072	0.0008	0.0031	0.01	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.51343	NA	NA	NA	NA	NA	0.007	NA	5.9851
1054	15	80473505	80473505	A	G	intronic	FAH	NA	NA	NA	intronic	ENSG00000103876	NA	NA	NA	Score=524;Name=lod=180	NA	15q25.1	Score=911;Name=V$AREB6_02	NA	NA	NA	rs60585303	0.04	0.04	0.032	0.0459265	NA	NA	0.0043	0.1717	NA	NA	NA	0.01	0.16	0.0146	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.091294	2.091294	NA	0.00093	0.148207	NA	0.058	NA	5.98447
1054	22	50278568	50278568	A	G	exonic	ZBED4	NA	nonsynonymous SNV	ZBED4:NM_014838:exon2:c.A1258G:p.I420V	exonic	ENSG00000100426	NA	nonsynonymous SNV	ENSG00000100426:ENST00000216268:exon2:c.A1258G:p.I420V	NA	NA	22q13.33	NA	NA	NA	NA	rs910799	0.66	0.66	0.604	0.617812	0.8022	0.8264	0.8242	0.1831	0.6544	0.79	0.81	0.81	0.18	0.7499	0.81	0.99	T	0.0	B	0.0	B	0.807	N	1.000	P	0.41	N	0.98	T	-0.932	T	0.000	T	0.007	-1.644	0.013	0.478	0.044	1.047	2.017	-1.643533	NA	1	0.797442	0.293236	NA	0.522	NA	5.9837914
1054	19	38853297	38853297	G	A	intronic	CATSPERG	NA	NA	NA	UTR3	ENSG00000099338	ENST00000471517:c.*1909G>A	NA	NA	NA	NA	19q13.2	NA	Name=Egr-1,Sin3Ak-20,Pol2-4H8,ZBTB7A_(SC-34508),E2F6_(H-50),ETS1	Name=145	NA	rs2302183	0.16	0.16	0.134	0.159145	0.1829	0.1339	0.2435	0.0658	0.227	0.19	0.15	0.25	0.06	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.243339	NA	NA	NA	NA	NA	0.116	NA	5.9837667
1054	6	31116246	31116246	G	A	exonic	CCHCR1	NA	nonsynonymous SNV	CCHCR1:NM_001105563:exon10:c.C1408T:p.R470W,CCHCR1:NM_001105564:exon10:c.C1516T:p.R506W,CCHCR1:NM_019052:exon10:c.C1249T:p.R417W	exonic	ENSG00000204536	NA	nonsynonymous SNV	ENSG00000204536:ENST00000376266:exon10:c.C1249T:p.R417W,ENSG00000204536:ENST00000396263:exon10:c.C1249T:p.R417W,ENSG00000204536:ENST00000396268:exon10:c.C1516T:p.R506W,ENSG00000204536:ENST00000451521:exon10:c.C1408T:p.R470W	NA	NA	6p21.33	NA	NA	NA	NA	rs130068	0.41	0.41	0.423	0.409944	0.4662	0.2966	0.4308	0.4175	0.4438	0.47	0.3	0.43	0.43	0.4391	0.47	0.15	T	0.007	B	0.005	B	0.250	N	1.000	P	1.05	L	3.64	T	-0.928	T	0.004	T	0.205	-0.03	3.862	1.05	0.209	0.281	4.610	-0.029722	NA	0.11	0.444444	0.43415	NA	0.391	NA	5.9835894
1054	17	25853650	25853650	G	A	intronic	KSR1	NA	NA	NA	ncRNA_exonic	ENSG00000263368	NA	NA	NA	Score=574;Name=lod=288	NA	17q11.2	NA	Name=Max,Mxi1_(bHLH),Sin3Ak-20	NA	NA	rs2945379	0.42	0.42	0.435	0.473043	0.3499	0.3006	0.4467	0.6566	0.5481	0.35	0.29	0.48	0.64	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.560377	2.560377	NA	NA	NA	NA	0.377	NA	5.9834333
1054	12	7945559	7945559	T	C	exonic	NANOG	NA	synonymous SNV	NANOG:NM_024865:exon2:c.T165C:p.P55P	exonic	ENSG00000111704	NA	synonymous SNV	ENSG00000111704:ENST00000229307:exon2:c.T165C:p.P55P,ENSG00000111704:ENST00000526286:exon2:c.T165C:p.P55P,ENSG00000111704:ENST00000541267:exon4:c.T93C:p.P31P	Score=309;Name=lod=24	NA	12p13.31	Score=764;Name=V$PAX5_01	NA	NA	NA	rs4294629	0.38	0.38	0.358	0.379593	0.5915	0.0536	0.5259	0.3313	0.4591	0.58	0.05	0.51	0.35	0.5126	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.732259	NA	NA	0.579186	0.362914	NA	0.449	NA	5.9833806
1054	3	121361787	121361787	G	A	exonic	HCLS1	NA	synonymous SNV	HCLS1:NM_005335:exon6:c.C441T:p.H147H	exonic	ENSG00000180353	NA	synonymous SNV	ENSG00000180353:ENST00000314583:exon6:c.C441T:p.H147H,ENSG00000180353:ENST00000428394:exon6:c.C441T:p.H147H	NA	NA	3q13.33	Score=894;Name=V$OCT1_06	NA	NA	NA	rs2070178	0.22	0.22	0.231	0.23103	0.2197	0.2768	0.1744	0.1838	0.2996	0.22	0.3	0.18	0.16	0.2358	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.237774	NA	NA	0.227791	0.209714	NA	0.21	NA	5.9833756
1054	3	46005767	46005767	C	T	intronic	FYCO1	NA	NA	NA	intronic	ENSG00000163820	NA	NA	NA	NA	NA	3p21.31	NA	Name=NFKB,BATF,PU.1,IRF4_(M-17)	Name=7	NA	rs140590198	0.01	0.01	0.009	0.00479233	0.0169	NA	0.0058	0.0008	0.002	0.02	NA	0.01	0.002	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.844778	1.844778	NA	NA	NA	NA	NA	NA	5.9831
1054	11	68660962	68660962	T	C	intronic	MRPL21	NA	NA	NA	intronic	ENSG00000197345	NA	NA	NA	NA	NA	11q13.3	NA	Name=BCL3	Name=7	NA	rs118025268	0.0041	0.0041	0.004	0.00199681	0.007	NA	0.0043	NA	NA	0.01	NA	0.01	NA	0.0034	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.630876	NA	NA	0.006521	0.001364	NA	NA	NA	5.983079
1054	11	403980	403980	G	A	exonic	PKP3	NA	synonymous SNV	PKP3:NM_007183:exon11:c.G2115A:p.P705P	exonic	ENSG00000184363	NA	synonymous SNV	ENSG00000184363:ENST00000331563:exon11:c.G2115A:p.P705P	Score=522;Name=lod=177	NA	11p15.5	Score=798;Name=V$AHR_01	NA	NA	NA	rs11748	0.49	0.49	0.483	0.510982	0.5606	0.3651	0.6066	0.5212	0.5286	0.55	0.36	0.58	0.5	0.5612	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.545886	NA	NA	0.56215	0.533333	NA	0.514	NA	5.9827166
1054	3	53891029	53891029	G	A	intronic	IL17RB	NA	NA	NA	intronic	ENSG00000056736	NA	NA	NA	NA	NA	3p21.1	NA	Name=EBF	Name=3	NA	rs191459061	0.0037	0.0037	NA	0.00199681	0.0099	NA	NA	NA	NA	0.01	NA	NA	NA	0.005	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.216058	NA	NA	0.002674	0.000227	NA	NA	NA	5.982426
1054	17	80992932	80992932	A	C	exonic	B3GNTL1	NA	synonymous SNV	B3GNTL1:NM_001009905:exon4:c.T321G:p.S107S	exonic	ENSG00000175711	NA	synonymous SNV	ENSG00000175711:ENST00000320865:exon4:c.T321G:p.S107S	Score=471;Name=lod=109	NA	17q25.3	NA	NA	NA	NA	rs16940609	0.19	0.19	0.18	0.174521	0.2286	0.2093	0.17	0.1301	0.1462	0.23	0.22	0.18	0.12	0.2042	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.649658	NA	NA	0.251628	0.138221	NA	0.246	NA	5.9822386
1054	2	151343393	151343393	C	A	intronic	RND3	NA	NA	NA	intronic	ENSG00000115963	NA	NA	NA	NA	NA	2q23.3	NA	Name=ZNF263,Pol2,Pol2(b)	Name=81	NA	rs115410735	0.01	0.01	0.01	0.00638978	0.0179	NA	0.0159	0.0015	0.001	0.01	NA	0.01	0.0041	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.996053	NA	NA	NA	NA	NA	NA	NA	5.9821
1054	5	172560793	172560793	C	T	UTR3	CREBRF	NM_153607:c.*45C>T	NA	NA	UTR3	ENSG00000164463	ENST00000540014:c.*45C>T,ENST00000296953:c.*45C>T	NA	NA	Score=670;Name=lod=704	NA	5q35.1	Score=857;Name=V$SREBP1_01	NA	NA	NA	rs35387209	0.07	0.07	0.068	0.0708866	0.1173	0.0069	0.0706	0.028	0.1472	0.12	0.01	0.09	0.04	0.1114	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.26424	NA	NA	0.122587	0.052429	NA	0.094	NA	5.9820464
1054	7	128358891	128358891	C	A	exonic	FAM71F1	NA	synonymous SNV	FAM71F1:NM_032599:exon3:c.C441A:p.L147L	exonic	ENSG00000135248	NA	synonymous SNV	ENSG00000135248:ENST00000466842:exon1:c.C9A:p.L3L,ENSG00000135248:ENST00000315184:exon3:c.C441A:p.L147L,ENSG00000135248:ENST00000471558:exon3:c.C441A:p.L147L	Score=363;Name=lod=40	NA	7q32.1	NA	NA	NA	NA	rs745229	0.19	0.19	0.196	0.201278	0.2366	0.1042	0.1571	0.2209	0.2699	0.24	0.12	0.14	0.21	0.2172	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.082778	NA	NA	0.231279	0.199047	NA	0.174	NA	5.9815876
1054	12	129360498	129360498	G	A	exonic	GLT1D1	NA	synonymous SNV	GLT1D1:NM_144669:exon2:c.G108A:p.K36K	exonic	ENSG00000151948	NA	synonymous SNV	ENSG00000151948:ENST00000281703:exon2:c.G108A:p.K36K,ENSG00000151948:ENST00000413816:exon2:c.G87A:p.K29K,ENSG00000151948:ENST00000441390:exon2:c.G108A:p.K36K,ENSG00000151948:ENST00000442111:exon2:c.G108A:p.K36K,ENSG00000151948:ENST00000537468:exon2:c.G75A:p.K25K,ENSG00000151948:ENST00000539044:exon2:c.G108A:p.K36K	Score=395;Name=lod=54	NA	12q24.33	NA	NA	NA	NA	rs482401	0.3	0.3	0.297	0.340256	0.2256	0.2361	0.304	0.4803	0.4018	0.24	0.24	0.28	0.47	0.2623	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.205599	NA	NA	0.197558	0.435996	NA	0.384	NA	5.9812086
1054	6	35209225	35209225	T	A	intronic	SCUBE3	NA	NA	NA	intronic	ENSG00000146197	NA	NA	NA	NA	NA	6p21.31	NA	Name=CTCF	Name=128	NA	rs3800382	0.11	0.11	0.109	0.113618	0.0189	0.3274	0.0965	0.0424	0.0992	0.03	0.31	0.08	0.04	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.124451	NA	NA	NA	NA	NA	0.051	NA	5.9811
1054	19	3005425	3005425	C	T	intronic	TLE2	NA	NA	NA	intronic	ENSG00000065717	NA	NA	NA	NA	NA	19p13.3	NA	Name=GATA-2	Name=5	NA	rs144033921	0.0032	0.0032	0.002	0.00279553	0.004	0.002	0.0101	0.0008	NA	0.0026	0.0035	0.01	NA	0.0059	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.175997	NA	NA	0.009174	0.001174	NA	0.007	NA	5.980926
1054	6	109762236	109762236	G	A	UTR5	PPIL6,SMPD2	NM_001111298:c.-443C>T,NM_173672:c.-443C>T;NM_003080:c.-89G>A	NA	NA	UTR5	ENSG00000135587,ENSG00000185250	ENST00000258052:c.-89G>A;ENST00000521072:c.-443C>T,ENST00000424445:c.-443C>T,ENST00000440797:c.-443C>T	NA	NA	NA	NA	6q21	NA	Name=HA-E2F1,Pol2	Name=146	NA	rs1048203	0.33	0.33	0.291	0.3127	0.3529	0.3502	0.3156	0.1936	0.3916	0.35	0.42	0.31	0.2	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.288853	1.288853	NA	NA	NA	NA	0.246	NA	5.9804334
1054	3	167402236	167402236	T	C	intronic	PDCD10	NA	NA	NA	intronic	ENSG00000114209	NA	NA	NA	NA	NA	3q26.1	Score=965;Name=V$TBP_01	Name=CTCF	NA	NA	rs78782877	0.01	0.01	0.011	0.00678914	0.0199	NA	0.0101	0.0038	0.002	0.02	NA	0.01	0.01	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.771042	NA	NA	NA	NA	NA	0.007	NA	5.9801
1054	15	22789093	22789093	G	A	intergenic	GOLGA6L1,TUBGCP5	dist=43091;dist=44302	NA	NA	ncRNA_exonic	ENSG00000259400	NA	NA	NA	Score=534;Name=lod=198	NA	15q11.2	Score=915;Name=V$ZIC1_01	NA	NA	NA	rs117190602	0.01	0.01	0.013	0.00399361	0.0199	NA	NA	NA	NA	0.02	NA	NA	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.990082	NA	NA	NA	NA	NA	0.007	NA	5.9801
1054	16	5112317	5112317	G	A	intronic	C16orf89	NA	NA	NA	intronic	ENSG00000033011,ENSG00000153446	NA	NA	NA	NA	NA	16p13.3	NA	Name=EBF,TCF12,PAX5-C20,SP1,MEF2A,EBF1_(C-8)	Name=6	NA	rs116852727	0.01	0.01	0.01	0.0071885	0.0199	NA	0.0101	0.0008	0.0082	0.02	NA	0.01	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.004274	NA	NA	NA	NA	NA	NA	NA	5.9801
1054	17	25410373	25410373	A	T	intergenic	NONE,MIR4522	dist=NONE;dist=210563	NA	NA	ncRNA_exonic	ENSG00000265646	NA	NA	NA	Score=808;Name=lod=2553	NA	17q11.1	NA	Name=TAF1,HEY1	NA	NA	rs142548583	0.01	0.01	0.008	0.0123802	0.0209	NA	0.0173	NA	0.0297	0.02	NA	0.02	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.503782	NA	NA	NA	NA	NA	0.007	NA	5.9791
1054	12	106500160	106500160	T	A	intronic	NUAK1	NA	NA	NA	intronic	ENSG00000074590	NA	NA	NA	NA	NA	12q23.3	NA	Name=p300_(N-15),JunD,STAT3,c-Jun,Max,Rad21,p300,CEBPB	Name=43	NA	rs2374587	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0212	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.033676	NA	NA	NA	NA	NA	0.138	NA	5.9788
1054	16	56870474	56870474	G	A	intronic	NUP93	NA	NA	NA	intronic	ENSG00000102900	NA	NA	NA	NA	NA	16q13	NA	Name=CEBPB	Name=28	NA	rs112276608	0.0027	0.0027	0.002	0.00419329	0.005	NA	0.0014	0.0023	0.0123	0.01	NA	0.0028	0.002	0.007	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.163258	NA	NA	0.009419	0.002957	NA	0.007	NA	5.978581
1054	4	74735734	74735734	C	T	intronic	CXCL1	NA	NA	NA	intronic	ENSG00000163739	NA	NA	NA	NA	NA	4q13.3	NA	Name=Pol2	Name=3	NA	rs2018732	0.05	0.05	0.059	0.0642971	NA	NA	0.0231	0.2315	NA	NA	NA	0.02	0.22	0.0198	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.769395	NA	NA	0.001628	0.196762	NA	0.087	NA	5.978572
1054	4	74736235	74736235	C	T	intronic	CXCL1	NA	NA	NA	intronic	ENSG00000163739	NA	NA	NA	NA	NA	4q13.3	NA	Name=STAT3,Pol2,CEBPB	Name=59	NA	rs1814092	0.05	0.05	0.062	0.0648962	NA	NA	0.0231	0.2337	NA	NA	NA	0.02	0.22	0.0198	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.390355	NA	NA	0.001628	0.205629	NA	0.08	NA	5.978572
1054	19	3162909	3162909	C	T	exonic	GNA15	NA	synonymous SNV	GNA15:NM_002068:exon7:c.C1017T:p.L339L	exonic	ENSG00000060558	NA	synonymous SNV	ENSG00000060558:ENST00000262958:exon7:c.C1017T:p.L339L	Score=624;Name=lod=456	NA	19p13.3	NA	NA	NA	NA	rs1637656	0.17	0.17	0.151	0.146166	0.2376	0.0278	0.2118	0.1604	0.1084	0.23	0.03	0.23	0.17	0.2021	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.251681	1.251681	NA	0.248837	0.165683	NA	0.196	NA	5.9781296
1054	1	22336308	22336308	G	A	exonic	CELA3A	NA	synonymous SNV	CELA3A:NM_005747:exon7:c.G753A:p.T251T	exonic	ENSG00000142789	NA	synonymous SNV	ENSG00000142789:ENST00000400271:exon2:c.G177A:p.T59T,ENSG00000142789:ENST00000290122:exon7:c.G753A:p.T251T	NA	NA	1p36.12	Score=840;Name=V$GR_Q6	NA	NA	NA	rs12908	0.3	0.3	0.243	0.285543	0.2207	0.3998	0.4078	0.2307	0.2219	0.24	0.37	0.38	0.25	0.2425	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.305205	NA	NA	0.225465	0.258738	NA	0.246	NA	5.9780016
1054	19	23545250	23545250	A	G	exonic	ZNF91	NA	synonymous SNV	ZNF91:NM_003430:exon4:c.T531C:p.T177T	exonic	ENSG00000167232	NA	synonymous SNV	ENSG00000167232:ENST00000595533:exon2:c.T234C:p.T78T,ENSG00000167232:ENST00000397082:exon3:c.T435C:p.T145T,ENSG00000167232:ENST00000300619:exon4:c.T531C:p.T177T	Score=295;Name=lod=21	NA	19p12	NA	NA	Name=6	NA	rs1044095	0.39	0.39	0.342	0.381589	0.5964	0.1558	0.4841	0.2693	0.4724	0.6	0.17	0.49	0.24	0.5125	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.310923	NA	NA	0.580156	0.294796	ID=COSM1392225,COSM1392224;OCCURENCE=1(large_intestine)	0.449	NA	5.9776106
1054	19	31770009	31770009	C	T	exonic	TSHZ3	NA	synonymous SNV	TSHZ3:NM_020856:exon2:c.G690A:p.T230T	exonic	ENSG00000121297	NA	synonymous SNV	ENSG00000121297:ENST00000240587:exon2:c.G690A:p.T230T	NA	NA	19q12	NA	NA	NA	Score=73;Name=1138215.3_0_+_73	rs28609894	0.27	0.27	0.276	0.314696	0.2187	0.2331	0.2651	0.4304	0.3763	0.21	0.22	0.29	0.39	0.2503	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.184688	NA	NA	0.220116	0.406945	NA	0.435	NA	5.9775506
1054	17	48761105	48761105	C	T	exonic	ABCC3	NA	synonymous SNV	ABCC3:NM_003786:exon27:c.C3942T:p.H1314H	exonic	ENSG00000108846	NA	synonymous SNV	ENSG00000108846:ENST00000285238:exon27:c.C3942T:p.H1314H	NA	NA	17q21.33	NA	Name=Pol2	NA	NA	rs2277624	0.26	0.26	0.244	0.286941	0.2227	0.2411	0.268	0.4032	0.2566	0.21	0.21	0.27	0.39	0.2478	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.983882	NA	NA	0.218837	0.354063	NA	0.304	NA	5.9773296
1054	3	10157368	10157368	C	T	UTR5	BRK1	NM_018462:c.-18C>T	NA	NA	UTR5	ENSG00000254999	ENST00000530758:c.-18C>T	NA	NA	NA	NA	3p25.3	NA	Name=HEY1,NFKB,CCNT2,NF-YB,GTF2B,Nrf1,IRF1,GTF2F1_(RAP-74),TBP,NF-YA,TAF1,HMGN3,E2F4,NANOG_(SC-33759),YY1,TCF4,RFX5_(N-494),SP1,Pol2,c-Fos,Pol2-4H8,c-Jun,YY1_(C-20),HA-E2F1,BRCA1_(C-1863)	Name=148	NA	rs7645759	0.15	0.15	0.135	0.167133	0.0994	0.0248	0.1513	0.3419	0.1585	0.11	0.03	0.15	0.35	0.1357	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.935262	NA	NA	0.120942	0.27381	NA	0.297	NA	5.9772914
1054	21	35134148	35134148	C	T	intronic	ITSN1	NA	NA	NA	intronic	ENSG00000205726,ENSG00000249209	NA	NA	NA	NA	NA	21q22.11	NA	Name=MafK_(SC-477),MafF_(M8194),PU.1,eGFP-JunD,ELF1_(SC-631),Max,GR,FOSL1_(SC-183),p300,CEBPB,eGFP-JunB,JunD,FOXA1_(C-20),STAT3,RFX5_(N-494),KAP1,c-Fos,GATA-2,c-Jun,AP-2gamma,eGFP-FOS,MafK_(ab50322),p300_(N-15),NF-E2	Name=136	NA	rs77400511	0.01	0.01	0.013	0.00658946	0.0229	NA	0.0101	0.0015	0.001	0.02	NA	0.01	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.303096	NA	NA	NA	NA	NA	NA	NA	5.9771
1054	14	65203523	65203523	C	T	intronic	PLEKHG3	NA	NA	NA	intronic	ENSG00000126822	NA	NA	NA	NA	NA	14q23.3	NA	Name=HNF4A_(H-171),HNF4G_(SC-6558),HNF4A	Name=11	NA	rs148592933	0.0041	0.0041	0.002	0.00339457	0.0099	0.001	0.0058	0.0008	0.001	0.01	0.0017	0.0028	0.002	0.0043	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.434321	NA	NA	0.008721	0.002043	NA	NA	NA	5.977079
1054	11	6632450	6632450	C	T	exonic	TAF10	NA	synonymous SNV	TAF10:NM_006284:exon4:c.G537A:p.T179T	exonic	ENSG00000166337	NA	synonymous SNV	ENSG00000166337:ENST00000299424:exon4:c.G537A:p.T179T	Score=682;Name=lod=791	NA	11p15.4	NA	NA	NA	NA	rs12451	0.17	0.17	0.157	0.141374	0.2406	0.0833	0.1974	0.0825	0.1391	0.25	0.1	0.2	0.09	0.21	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.247636	NA	NA	0.23906	0.125625	NA	0.174	NA	5.9770066
1054	8	1817367	1817367	G	A	exonic	ARHGEF10	NA	synonymous SNV	ARHGEF10:NM_014629:exon7:c.G630A:p.E210E	exonic	ENSG00000104728	NA	synonymous SNV	ENSG00000104728:ENST00000262112:exon7:c.G705A:p.E235E,ENSG00000104728:ENST00000349830:exon7:c.G630A:p.E210E,ENSG00000104728:ENST00000398564:exon7:c.G705A:p.E235E,ENSG00000104728:ENST00000520359:exon7:c.G633A:p.E211E,ENSG00000104728:ENST00000398560:exon8:c.G705A:p.E235E,ENSG00000104728:ENST00000518288:exon8:c.G705A:p.E235E	Score=599;Name=lod=364	NA	8p23.3	NA	NA	NA	NA	rs7003969	0.27	0.27	0.262	0.235823	0.2157	0.5179	0.2061	0.0983	0.1728	0.23	0.52	0.2	0.11	0.2382	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.03538	NA	0	0.236395	0.115524	NA	0.203	NA	5.9763716
1054	16	2806619	2806619	C	T	intronic	SRRM2	NA	NA	NA	intronic	ENSG00000167978	NA	NA	NA	Score=763;Name=lod=1688	NA	16p13.3	NA	NA	Name=5	NA	rs117160431	0.0037	0.0037	0.003	0.00299521	0.0099	NA	0.0029	NA	0.0031	0.01	NA	NA	NA	0.0052	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.313012	1.313012	NA	0.008605	0.002049	NA	NA	NA	5.976295
1054	8	163226	163226	T	C	ncRNA_exonic	RPL23AP53	NA	NA	NA	ncRNA_exonic	ENSG00000223508	NA	NA	NA	Score=713;Name=lod=1055	NA	8p23.3	NA	Name=CEBPB	NA	NA	rs3008288	0.65	0.65	0.593	0.655152	0.6909	0.8006	0.7349	0.4342	0.7106	0.66	0.77	0.7	0.45	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.748238	NA	NA	NA	NA	NA	0.399	NA	5.9757666
1055	9	71862975	71862975	C	T	exonic	TJP2	NA	synonymous SNV	TJP2:NM_001170415:exon19:c.C2727T:p.T909T,TJP2:NM_001170416:exon19:c.C2808T:p.T936T,TJP2:NM_001170630:exon19:c.C2715T:p.T905T,TJP2:NM_004817:exon19:c.C2715T:p.T905T,TJP2:NM_201629:exon19:c.C2715T:p.T905T,TJP2:NM_001170414:exon20:c.C2646T:p.T882T	exonic	ENSG00000119139	NA	synonymous SNV	ENSG00000119139:ENST00000265384:exon19:c.C2715T:p.T905T,ENSG00000119139:ENST00000348208:exon19:c.C2715T:p.T905T,ENSG00000119139:ENST00000377245:exon19:c.C2715T:p.T905T,ENSG00000119139:ENST00000535702:exon19:c.C2727T:p.T909T,ENSG00000119139:ENST00000539225:exon19:c.C2808T:p.T936T,ENSG00000119139:ENST00000453658:exon20:c.C2646T:p.T882T	NA	NA	9q21.11	NA	NA	NA	NA	rs2282336	0.29	0.29	0.252	0.284145	0.2197	0.4514	0.451	0.1664	0.2188	0.22	0.44	0.42	0.13	0.2614	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.229967	NA	NA	0.211047	0.17113	NA	0.239	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000037081.1;CLNDSDB=.;CLNDSDBID=.	5.9745196
1055	12	33535289	33535289	G	A	exonic	SYT10	NA	synonymous SNV	SYT10:NM_198992:exon5:c.C1365T:p.Y455Y	exonic	ENSG00000110975	NA	synonymous SNV	ENSG00000110975:ENST00000228567:exon5:c.C1365T:p.Y455Y,ENSG00000110975:ENST00000535526:exon7:c.C822T:p.Y274Y	NA	NA	12p11.1	Score=916;Name=V$TCF11_01	NA	NA	NA	rs10844571	0.19	0.19	0.17	0.198882	0.2296	0.0655	0.2839	0.1619	0.2945	0.23	0.07	0.28	0.18	0.2331	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.280948	NA	NA	0.229651	0.172265	NA	0.167	NA	5.9743156
1055	4	185687863	185687863	A	G	exonic	ACSL1	NA	synonymous SNV	ACSL1:NM_001995:exon13:c.T1176C:p.F392F	exonic	ENSG00000151726	NA	synonymous SNV	ENSG00000151726:ENST00000454703:exon12:c.T663C:p.F221F,ENSG00000151726:ENST00000507295:exon12:c.T1074C:p.F358F,ENSG00000151726:ENST00000281455:exon13:c.T1176C:p.F392F,ENSG00000151726:ENST00000504342:exon13:c.T1176C:p.F392F,ENSG00000151726:ENST00000513317:exon13:c.T1176C:p.F392F,ENSG00000151726:ENST00000515030:exon13:c.T1176C:p.F392F,ENSG00000151726:ENST00000437665:exon14:c.T663C:p.F221F	Score=542;Name=lod=212	NA	4q35.1	NA	NA	NA	NA	rs11727009	0.23	0.23	0.206	0.214856	0.2366	0.2153	0.2277	0.2073	0.1933	0.25	0.24	0.22	0.2	0.2212	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.285246	1.285246	NA	0.234651	0.223559	NA	0.196	NA	5.9742156
1055	4	85414812	85414812	G	A	intronic	NKX6-1	NA	NA	NA	intronic	ENSG00000163623	NA	NA	NA	NA	NA	4q21.23	NA	Name=Sin3Ak-20	Name=11	NA	rs145722648	0.01	0.01	0.012	0.00878594	0.0258	NA	0.0072	0.0008	0.0123	0.02	NA	0.01	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.69554	NA	NA	NA	NA	NA	0.007	NA	5.9742
1055	19	313704	313704	G	A	intronic	MIER2	NA	NA	NA	intronic	ENSG00000105556	NA	NA	NA	NA	NA	19p13.3	NA	Name=ZNF263	Name=14	NA	rs78169328	0.03	0.03	0.032	0.0401358	0.0258	NA	0.0115	0.1051	0.0286	0.03	NA	0.01	0.09	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.042854	NA	NA	NA	NA	NA	0.014	NA	5.9742
1055	15	49620200	49620200	C	T	exonic	GALK2	NA	synonymous SNV	GALK2:NM_001001556:exon10:c.C1188T:p.C396C,GALK2:NM_002044:exon10:c.C1221T:p.C407C	exonic	ENSG00000156958	NA	synonymous SNV	ENSG00000156958:ENST00000559580:exon3:c.C321T:p.C107C,ENSG00000156958:ENST00000327171:exon10:c.C1188T:p.C396C,ENSG00000156958:ENST00000396509:exon10:c.C1149T:p.C383C,ENSG00000156958:ENST00000559454:exon10:c.C1149T:p.C383C,ENSG00000156958:ENST00000560031:exon10:c.C1221T:p.C407C,ENSG00000156958:ENST00000544523:exon11:c.C1149T:p.C383C	Score=577;Name=lod=296	NA	15q21.2	NA	NA	NA	NA	rs1055254	0.2	0.2	0.189	0.202077	0.2575	0.0466	0.1873	0.2428	0.2607	0.25	0.06	0.2	0.27	0.2133	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.003603	NA	NA	0.221769	0.248179	NA	0.174	NA	5.9740976
1055	17	43183028	43183028	G	A	UTR3	NMT1	NM_021079:c.*21G>A	NA	NA	UTR3	ENSG00000136448	ENST00000592782:c.*21G>A,ENST00000258960:c.*21G>A	NA	NA	Score=582;Name=lod=308	NA	17q21.31	Score=936;Name=V$GATA_C	Name=Pol2(b)	NA	NA	rs1053733	0.52	0.52	0.488	0.50599	0.4712	0.7946	0.4755	0.3321	0.501	0.47	0.8	0.48	0.3	0.4574	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.364613	4.364613	NA	0.430814	0.342261	NA	0.464	NA	5.9739194
1055	1	11181327	11181327	C	T	exonic	MTOR	NA	synonymous SNV	MTOR:NM_004958:exon49:c.G6909A:p.L2303L	exonic	ENSG00000198793	NA	synonymous SNV	ENSG00000198793:ENST00000376838:exon11:c.G1524A:p.L508L,ENSG00000198793:ENST00000361445:exon49:c.G6909A:p.L2303L	Score=584;Name=lod=316	NA	1p36.22	NA	NA	NA	NA	rs11121691	0.23	0.23	0.259	0.220647	0.2356	0.0565	0.1542	0.4365	0.1299	0.23	0.06	0.16	0.46	0.2184	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.220803	NA	NA	0.238837	0.425556	NA	0.225	NA	5.9738296
1055	6	158330765	158330765	G	A	exonic	SNX9	NA	synonymous SNV	SNX9:NM_016224:exon8:c.G774A:p.R258R	exonic	ENSG00000130340	NA	synonymous SNV	ENSG00000130340:ENST00000392185:exon8:c.G774A:p.R258R	Score=610;Name=lod=402	NA	6q25.3	NA	NA	NA	NA	rs3211067	0.2	0.2	0.205	0.205272	0.2485	0.1369	0.1383	0.2239	0.2536	0.25	0.13	0.16	0.24	0.2095	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.411457	1.411457	NA	0.234884	0.219246	NA	0.123	NA	5.9737826
1055	1	53163860	53163860	G	T	intronic	SELRC1	NA	NA	NA	intronic	ENSG00000162377	NA	NA	NA	NA	NA	1p32.3	NA	Name=Pol2,Mxi1_(bHLH),YY1,YY1_(C-20),Sin3Ak-20,TAF7_(SQ-8),E2F6,Pol2-4H8,TAF1,E2F6_(H-50),USF2,USF-1,TBP,Max,c-Myc,ELF1_(SC-631),HEY1,SETDB1	Name=148	NA	rs138892493	0.01	0.01	0.006	0.00958466	0.0099	NA	0.0231	0.0151	0.002	0.01	NA	0.04	0.01	0.0082	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.573608	1.573608	NA	0.008956	0.011348	NA	0.029	NA	5.972944
1055	2	234975808	234975808	T	A	intronic	SPP2	NA	NA	NA	intronic	ENSG00000072080	NA	NA	NA	NA	NA	2q37.1	NA	Name=MafK_(ab50322)	Name=10	NA	rs41270757	0.01	0.01	0.002	0.00399361	0.0129	NA	0.0101	NA	NA	0.01	NA	0.01	NA	NA	0.015	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.542216	NA	NA	0.014771	0.002168	NA	NA	NA	5.972329
1055	7	100875772	100875772	T	G	exonic	CLDN15	NA	synonymous SNV	CLDN15:NM_014343:exon5:c.A606C:p.P202P,CLDN15:NM_001185080:exon6:c.A606C:p.P202P	exonic	ENSG00000106404	NA	synonymous SNV	ENSG00000106404:ENST00000414035:exon4:c.A441C:p.P147P,ENSG00000106404:ENST00000308344:exon5:c.A606C:p.P202P,ENSG00000106404:ENST00000401528:exon6:c.A606C:p.P202P	NA	NA	7q22.1	NA	Name=Pol2	NA	NA	rs1047319	0.21	0.21	0.202	0.22504	0.2435	0.1677	0.2061	0.1846	0.3333	0.23	0.16	0.23	0.19	0.2241	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.650099	NA	NA	0.226797	0.190054	ID=COSM329253;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.304	NA	5.9722696
1055	2	1647171	1647171	T	C	exonic	PXDN	NA	synonymous SNV	PXDN:NM_012293:exon19:c.A3921G:p.V1307V	exonic	ENSG00000130508	NA	synonymous SNV	ENSG00000130508:ENST00000252804:exon19:c.A3921G:p.V1307V	Score=552;Name=lod=234	NA	2p25.3	Score=682;Name=V$P53_01	Name=CTCF	NA	NA	rs6730800	0.91	0.91	0.901	0.907748	0.8926	0.999	0.9568	0.7723	0.9775	0.9	1	0.95	0.79	0.9088	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.266626	NA	NA	0.893001	0.804451	NA	0.804	NA	5.9722656
1055	14	22971265	22971265	C	G	intergenic	OR4E2,DAD1	dist=837027;dist=62542	NA	NA	exonic	ENSG00000211851	NA	unknown	UNKNOWN	Score=508;Name=lod=155	NA	14q11.2	NA	NA	Name=9	NA	rs17118924	0.05	0.05	0.042	0.0477236	0.0557	0.002	0.062	0.0726	0.0429	0.06	NA	0.07	0.07	0.0604	0.078	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.52899	1.52899	NA	0.078398	0.0625	NA	0.036	NA	5.9721687
1055	19	9492141	9492141	C	T	exonic	ZNF177,ZNF559-ZNF177	NA	synonymous SNV	ZNF177:NM_001172651:exon6:c.C1134T:p.I378I,ZNF177:NM_003451:exon9:c.C654T:p.I218I,ZNF559-ZNF177:NM_001172650:exon12:c.C654T:p.I218I	exonic	ENSG00000188629,ENSG00000270011	NA	synonymous SNV	ENSG00000188629:ENST00000434737:exon5:c.C1134T:p.I378I,ENSG00000188629:ENST00000589262:exon6:c.C1134T:p.I378I,ENSG00000188629:ENST00000343499:exon9:c.C654T:p.I218I,ENSG00000270011:ENST00000541595:exon12:c.C654T:p.I218I,ENSG00000188629:ENST00000602738:exon12:c.C654T:p.I218I	NA	NA	19p13.2	NA	Name=KAP1,ZNF274,SETDB1	Name=6	NA	rs3826783	0.53	0.53	0.537	0.54393	0.5606	0.4504	0.5375	0.5908	0.5644	0.55	0.42	0.57	0.6	0.5513	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.459017	NA	NA	0.582674	0.604176	NA	0.659	NA	5.9720926
1055	17	7453505	7453505	C	A	exonic	TNFSF12,TNFSF12-TNFSF13	NA	synonymous SNV	TNFSF12:NM_003809:exon3:c.C276A:p.R92R,TNFSF12-TNFSF13:NM_172089:exon3:c.C276A:p.R92R	exonic	ENSG00000239697,ENSG00000248871	NA	synonymous SNV	ENSG00000239697:ENST00000293825:exon3:c.C276A:p.R92R,ENSG00000248871:ENST00000293826:exon3:c.C276A:p.R92R,ENSG00000239697:ENST00000322272:exon3:c.C276A:p.R92R,ENSG00000239697:ENST00000557233:exon3:c.C276A:p.R92R	Score=395;Name=lod=54	NA	17p13.1	NA	NA	NA	NA	rs62059804	0.15	0.15	0.135	0.122204	0.2535	0.001	0.1628	0.1203	0.0859	0.25	0.0017	0.2	0.15	0.1896	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.424705	1.424705	NA	0.251512	0.149115	NA	0.101	NA	5.9720546
1055	7	100486656	100486656	T	G	exonic	UFSP1	NA	synonymous SNV	UFSP1:NM_001015072:exon1:c.A237C:p.V79V	exonic	ENSG00000176125	NA	synonymous SNV	ENSG00000176125:ENST00000388761:exon1:c.A237C:p.V79V	NA	NA	7q22.1	NA	Name=Pol2-4H8,Pol2(b)	Name=29	NA	rs13241786	0.66	0.66	0.65	0.651757	0.5427	0.8175	0.6873	0.6135	0.6196	0.54	0.82	0.65	0.67	0.6065	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.816655	NA	NA	0.54686	0.607127	ID=COSM150343;OCCURENCE=1(stomach),1(large_intestine)	0.659	NA	5.9706066
1055	15	78398146	78398146	G	A	exonic	CIB2	NA	synonymous SNV	CIB2:NM_001271889:exon3:c.C330T:p.D110D,CIB2:NM_001271888:exon4:c.C348T:p.D116D,CIB2:NM_006383:exon5:c.C477T:p.D159D	exonic	ENSG00000136425	NA	synonymous SNV	ENSG00000136425:ENST00000557846:exon3:c.C330T:p.D110D,ENSG00000136425:ENST00000539011:exon4:c.C348T:p.D116D,ENSG00000136425:ENST00000560618:exon4:c.C348T:p.D116D,ENSG00000136425:ENST00000258930:exon5:c.C477T:p.D159D	NA	NA	15q25.1	Score=781;Name=V$PPARG_03	NA	NA	NA	rs10456	0.14	0.14	0.141	0.127596	0.2495	0.0228	0.1556	0.0696	0.1687	0.26	0.02	0.2	0.06	0.2029	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.191522	NA	NA	0.244002	0.078097	NA	0.152	NA	5.9702646
1055	20	259969	259969	G	C	exonic	C20orf96	NA	synonymous SNV	C20orf96:NM_080571:exon5:c.C306G:p.T102T,C20orf96:NM_153269:exon5:c.C309G:p.T103T	exonic	ENSG00000196476	NA	synonymous SNV	ENSG00000196476:ENST00000382369:exon3:c.C204G:p.T68T,ENSG00000196476:ENST00000400269:exon3:c.C135G:p.T45T,ENSG00000196476:ENST00000360321:exon5:c.C309G:p.T103T	NA	NA	20p13	NA	Name=CTCF	Name=49	NA	rs7271033	0.68	0.68	0.662	0.66853	0.5606	0.7897	0.4914	0.8442	0.5429	0.58	0.79	0.5	0.85	0.5762	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.826938	NA	NA	0.56	0.787335	NA	0.007	NA	5.9698666
1055	1	161168004	161168004	C	T	exonic	ADAMTS4	NA	synonymous SNV	ADAMTS4:NM_005099:exon1:c.G414A:p.S138S	exonic	ENSG00000158859	NA	synonymous SNV	ENSG00000158859:ENST00000367995:exon1:c.G414A:p.S138S,ENSG00000158859:ENST00000367996:exon1:c.G414A:p.S138S	Score=472;Name=lod=111	NA	1q23.3	NA	NA	NA	NA	rs33941127	0.34	0.34	0.347	0.365016	0.2087	0.4494	0.3141	0.4145	0.408	0.21	0.47	0.29	0.43	0.2819	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.124133	NA	NA	0.206512	0.360191	NA	0.348	NA	5.9695546
1055	13	36686138	36686138	T	C	exonic	DCLK1	NA	synonymous SNV	DCLK1:NM_004734:exon3:c.A591G:p.P197P	exonic	ENSG00000133083	NA	synonymous SNV	ENSG00000133083:ENST00000255448:exon3:c.A591G:p.P197P,ENSG00000133083:ENST00000360631:exon3:c.A591G:p.P197P,ENSG00000133083:ENST00000379892:exon3:c.A591G:p.P197P	NA	NA	13q13.3	Score=813;Name=V$MEIS1AHOXA9_01	NA	NA	NA	rs3748308	0.22	0.22	0.22	0.221046	0.2137	0.1548	0.219	0.2436	0.2679	0.21	0.16	0.28	0.24	0.2332	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.348508	1.348508	NA	0.250233	0.260554	NA	0.29	NA	5.9695336
1055	14	38064215	38064215	G	C	UTR5	FOXA1	NM_004496:c.-38C>G	NA	NA	UTR5	ENSG00000129514	ENST00000250448:c.-38C>G,ENST00000553751:c.-38C>G	NA	NA	Score=340;Name=lod=32	NA	14q21.1	NA	Name=c-Myc,SUZ12,TBP,Pol2,CHD2_(N-1250)	Name=77	NA	rs79519281	0.45	0.45	0.422	0.384585	0.4543	0.506	0.5043	0.2247	0.319	0.45	0.6	0.47	0.25	0.4452	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.873487	NA	NA	0.464535	0.281434	NA	NA	NA	5.9692984
1055	19	35790503	35790503	G	A	exonic	MAG	NA	synonymous SNV	MAG:NM_001199216:exon5:c.G387A:p.E129E,MAG:NM_002361:exon5:c.G462A:p.E154E,MAG:NM_080600:exon5:c.G462A:p.E154E	exonic	ENSG00000105695	NA	synonymous SNV	ENSG00000105695:ENST00000600291:exon4:c.G387A:p.E129E,ENSG00000105695:ENST00000361922:exon5:c.G462A:p.E154E,ENSG00000105695:ENST00000392213:exon5:c.G462A:p.E154E,ENSG00000105695:ENST00000537831:exon5:c.G387A:p.E129E,ENSG00000105695:ENST00000595791:exon5:c.G462A:p.E154E	NA	NA	19q13.12	Score=869;Name=V$RORA1_01	NA	NA	NA	rs3746248	0.38	0.38	0.359	0.401358	0.2068	0.3512	0.2435	0.7617	0.2781	0.21	0.38	0.26	0.72	0.2765	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.416614	NA	NA	0.21407	0.66591	NA	0.435	NA	5.9692966
1055	2	101646144	101646144	G	A	exonic	TBC1D8	NA	synonymous SNV	TBC1D8:NM_001102426:exon12:c.C1986T:p.S662S	exonic	ENSG00000204634	NA	synonymous SNV	ENSG00000204634:ENST00000376840:exon12:c.C1986T:p.S662S,ENSG00000204634:ENST00000409318:exon12:c.C2031T:p.S677S	NA	NA	2q11.2	NA	Name=Pol2	NA	NA	rs3739015	0.21	0.21	0.213	0.161941	0.2714	0.1518	0.1916	0.0961	0.1278	0.27	0.21	0.22	0.11	0.2015	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.510344	NA	NA	0.224504	0.117087	NA	0.254	NA	5.9692626
1055	11	102567207	102567207	T	A	exonic	MMP27	NA	nonsynonymous SNV	MMP27:NM_022122:exon6:c.A797T:p.E266V	exonic	ENSG00000137675	NA	nonsynonymous SNV	ENSG00000137675:ENST00000260229:exon6:c.A797T:p.E266V	NA	NA	11q22.2	NA	NA	NA	NA	rs1276286	0.43	0.43	0.415	0.4375	0.4443	0.629	0.5043	0.1725	0.544	0.45	0.59	0.47	0.17	0.4658	0.59	0.44	T	0.0	B	0.0	B	0.002	N	1.000	P	-0.485	N	2.52	T	-0.933	T	0.000	T	0.05	-1.216	0.065	-1.3	-0.348	-0.450	5.235	-1.215502	NA	0.39	0.454059	0.241943	ID=COSM428288;OCCURENCE=1(breast)	0.449	NA	5.9691744
1055	6	116950876	116950876	G	A	intronic	RSPH4A	NA	NA	NA	intronic	ENSG00000111834	NA	NA	NA	NA	NA	6q22.1	NA	Name=PU.1	Name=4	NA	rs41290844	0.0032	0.0032	0.003	0.00219649	0.0089	NA	0.0029	NA	NA	0.01	NA	0.0028	NA	0.0075	0.015	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2228	NA	NA	0.014767	0.00227	NA	NA	NA	5.968833
1055	10	72503344	72503344	G	A	exonic	ADAMTS14	NA	synonymous SNV	ADAMTS14:NM_080722:exon13:c.G1965A:p.T655T,ADAMTS14:NM_139155:exon13:c.G1974A:p.T658T	exonic	ENSG00000138316	NA	synonymous SNV	ENSG00000138316:ENST00000373207:exon13:c.G1965A:p.T655T,ENSG00000138316:ENST00000373208:exon13:c.G1974A:p.T658T	NA	NA	10q22.1	Score=807;Name=V$HTF_01	NA	NA	NA	rs10999502	0.3	0.3	0.277	0.311502	0.2167	0.5387	0.2089	0.1641	0.4468	0.23	0.51	0.24	0.22	0.2691	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.073693	NA	NA	0.212093	0.172492	ID=COSM1178414;OCCURENCE=1(prostate)	0.21	NA	5.9687736
1055	19	45868309	45868309	T	G	exonic	ERCC2	NA	synonymous SNV	ERCC2:NM_001130867:exon5:c.A396C:p.R132R,ERCC2:NM_000400:exon6:c.A468C:p.R156R	exonic	ENSG00000104884	NA	synonymous SNV	ENSG00000104884:ENST00000586856:exon4:c.A318C:p.R106R,ENSG00000104884:ENST00000391941:exon5:c.A396C:p.R132R,ENSG00000104884:ENST00000485403:exon5:c.A396C:p.R132R,ENSG00000104884:ENST00000391940:exon6:c.A396C:p.R132R,ENSG00000104884:ENST00000391945:exon6:c.A468C:p.R156R,ENSG00000104884:ENST00000586131:exon6:c.A396C:p.R132R	Score=501;Name=lod=145	NA	19q13.32	NA	Name=AP-2gamma	NA	NA	rs238406	0.62	0.62	0.648	0.636182	0.5497	0.4901	0.487	0.9357	0.5767	0.57	0.52	0.49	0.92	0.5898	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.901198	NA	NA	0.558488	0.865638	NA	0.732	NA	5.9686786
1055	11	65384727	65384727	C	T	exonic	PCNXL3	NA	synonymous SNV	PCNXL3:NM_032223:exon3:c.C348T:p.P116P	exonic	ENSG00000197136	NA	synonymous SNV	ENSG00000197136:ENST00000355703:exon3:c.C348T:p.P116P	Score=490;Name=lod=131	NA	11q13.1	NA	NA	NA	NA	rs12790427	0.3	0.3	0.273	0.295927	0.1968	0.4226	0.4236	0.2648	0.2188	0.2	0.43	0.38	0.26	0.3045	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.492436	1.492436	NA	0.19678	0.238072	ID=COSM147270;OCCURENCE=1(stomach)	0.254	NA	5.9685866
1055	1	152193851	152193851	C	T	exonic	HRNR	NA	nonsynonymous SNV	HRNR:NM_001009931:exon3:c.G254A:p.R85H	exonic	ENSG00000197915	NA	nonsynonymous SNV	ENSG00000197915:ENST00000368801:exon3:c.G254A:p.R85H	Score=474;Name=lod=113	NA	1q21.3	NA	NA	NA	NA	rs11204937	0.59	0.59	0.59	0.532548	0.829	0.3284	0.5519	0.4705	0.5082	0.82	0.36	0.63	0.47	0.7062	0.83	0.55	T	0.0	B	0.0	B	.	.	1.000	P	-0.69	N	3.31	T	-0.915	T	0.002	T	0.037	-0.365	2.281	0.954	0.091	0.309	7.362	-0.364615	NA	0.55	0.830116	0.524285	NA	0.681	NA	5.9680174
1055	7	64293217	64293217	T	C	UTR3	ZNF138	NM_006524:c.*637T>C,NM_001271649:c.*637T>C,NM_001160183:c.*1353T>C,NM_001271640:c.*1353T>C,NM_001271638:c.*637T>C,NM_001271637:c.*1412T>C,NM_001271639:c.*637T>C	NA	NA	UTR3	ENSG00000197008	ENST00000359735:c.*637T>C,ENST00000437743:c.*637T>C,ENST00000440598:c.*1412T>C,ENST00000397136:c.*637T>C	NA	NA	Score=389;Name=lod=51	NA	7q11.21	NA	NA	Name=7	NA	rs3763506	0.26	0.26	0.228	0.239217	0.3658	0.1617	0.3314	0.1165	0.2894	0.35	0.18	0.35	0.12	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.036712	NA	NA	NA	NA	NA	0.362	NA	5.9675334
1055	2	100019496	100019496	A	G	exonic	REV1	NA	synonymous SNV	REV1:NM_001037872:exon20:c.T3237C:p.I1079I,REV1:NM_016316:exon20:c.T3240C:p.I1080I	exonic	ENSG00000135945	NA	synonymous SNV	ENSG00000135945:ENST00000258428:exon20:c.T3240C:p.I1080I,ENSG00000135945:ENST00000393445:exon20:c.T3237C:p.I1079I	Score=295;Name=lod=21	NA	2q11.2	Score=945;Name=V$NFY_Q6	NA	NA	NA	rs2305354	0.59	0.59	0.549	0.588658	0.5696	0.3681	0.7017	0.7564	0.5286	0.58	0.37	0.7	0.76	0.5797	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.1209	NA	NA	0.550581	0.735361	NA	0.572	NA	5.9667856
1055	13	103504517	103504517	T	C	exonic	BIVM-ERCC5,ERCC5	NA	synonymous SNV	ERCC5:NM_000123:exon2:c.T138C:p.H46H,BIVM-ERCC5:NM_001204425:exon10:c.T1500C:p.H500H	exonic	ENSG00000134899,ENSG00000270181	NA	synonymous SNV	ENSG00000134899:ENST00000355739:exon2:c.T138C:p.H46H,ENSG00000134899:ENST00000535557:exon2:c.T138C:p.H46H	Score=471;Name=lod=109	NA	13q33.1	NA	NA	NA	NA	rs1047768	0.49	0.49	0.483	0.493011	0.5845	0.25	0.3991	0.6778	0.4663	0.58	0.24	0.44	0.66	0.5291	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.826736	NA	NA	0.586628	0.660917	NA	0.464	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116990.2;CLNDSDB=.;CLNDSDBID=.	5.9664386
1055	21	45533999	45533999	G	A	intronic	PWP2	NA	NA	NA	intronic	ENSG00000241945	NA	NA	NA	NA	NA	21q22.3	NA	Name=GABP,CTCFL_(SC-98982),SMC3_(ab9263),Rad21,ELF1_(SC-631),CTCF,CTCF_(SC-5916),CTCF_(C-20)	Name=35	NA	rs150895066	0.02	0.02	0.011	0.0129792	0.0338	0.004	0.0115	0.0008	0.0184	0.04	0.01	0.01	0.002	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.231035	NA	NA	NA	NA	NA	0.007	NA	5.9662
1055	12	11183451	11183451	A	T	exonic	TAS2R31	NA	nonsynonymous SNV	TAS2R31:NM_176885:exon1:c.T484A:p.L162M	exonic	ENSG00000256436	NA	nonsynonymous SNV	ENSG00000256436:ENST00000390675:exon1:c.T484A:p.L162M	NA	NA	12p13.2	NA	NA	NA	NA	rs10743938	0.75	0.75	0.729	0.694289	0.7982	0.8611	0.7954	0.4039	0.7362	0.83	0.89	0.79	0.42	0.7719	0.89	0.89	T	0.005	B	0.026	B	.	.	1.000	P	-0.49	N	1.19	T	-0.975	T	0.000	T	0.039	-1.774	0.01	-0.114	-0.532	-1.645	0.397	-1.773597	NA	NA	0.797042	0.471225	NA	0.696	NA	5.9661914
1055	6	29760111	29760111	G	C	ncRNA_exonic	HCG4	NA	NA	NA	ncRNA_exonic	ENSG00000176998	NA	NA	NA	Score=278;Name=lod=18	NA	6p22.1	NA	Name=YY1_(C-20)	NA	NA	rs1737006	0.36	0.36	0.372	0.384784	0.3111	0.1964	0.3703	0.5991	0.3753	0.31	0.24	0.36	0.57	0.3894	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.505167	NA	NA	NA	NA	NA	0.391	NA	5.9661666
1055	10	72517837	72517837	C	T	exonic	ADAMTS14	NA	synonymous SNV	ADAMTS14:NM_080722:exon20:c.C3057T:p.P1019P,ADAMTS14:NM_139155:exon20:c.C3066T:p.P1022P	exonic	ENSG00000138316	NA	synonymous SNV	ENSG00000138316:ENST00000373207:exon20:c.C3057T:p.P1019P,ENSG00000138316:ENST00000373208:exon20:c.C3066T:p.P1022P	NA	NA	10q22.1	Score=782;Name=V$MYOGNF1_01	Name=CCNT2	NA	NA	rs6480463	0.52	0.52	0.507	0.516973	0.5517	0.4018	0.611	0.5537	0.4836	0.53	0.41	0.62	0.57	0.5608	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.589173	NA	NA	0.588488	0.536768	ID=COSM1348862;OCCURENCE=1(large_intestine)	0.514	NA	5.9656786
1055	1	121116678	121116678	C	T	intronic	SRGAP2D	NA	NA	NA	ncRNA_intronic	ENSG00000171943,ENSG00000230806	NA	NA	NA	Score=659;Name=lod=638	NA	1p11.2	Score=746;Name=V$MEF2_04	NA	NA	NA	rs61806689	NA	NA	0.212	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3677	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.011601	NA	NA	NA	NA	NA	0.029	NA	5.9656333
1055	13	49785877	49785877	C	T	intergenic	FNDC3A,MLNR	dist=1962;dist=8597	NA	NA	ncRNA_exonic	ENSG00000231665	NA	NA	NA	Score=505;Name=lod=151	NA	13q14.2	NA	Name=Pol2(phosphoS2)	NA	NA	rs11619052	0.02	0.02	0.017	0.0171725	0.0348	NA	0.0303	0.0023	0.0276	0.03	NA	0.03	0.0041	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.286308	NA	NA	NA	NA	NA	0.014	NA	5.9652
1056	1	33790496	33790496	G	A	exonic	PHC2	NA	synonymous SNV	PHC2:NM_004427:exon7:c.C942T:p.Y314Y,PHC2:NM_198040:exon14:c.C2547T:p.Y849Y	exonic	ENSG00000134686	NA	synonymous SNV	ENSG00000134686:ENST00000373418:exon7:c.C942T:p.Y314Y,ENSG00000134686:ENST00000373422:exon8:c.C1365T:p.Y455Y,ENSG00000134686:ENST00000431992:exon13:c.C2460T:p.Y820Y,ENSG00000134686:ENST00000257118:exon14:c.C2547T:p.Y849Y,ENSG00000134686:ENST00000419414:exon15:c.C2550T:p.Y850Y	Score=463;Name=lod=102	NA	1p35.1	NA	NA	NA	NA	rs11554674	0.17	0.17	0.158	0.172923	0.2416	0.2113	0.1715	0.0182	0.273	0.24	0.2	0.17	0.03	0.2133	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.32594	NA	NA	0.247209	0.051521	NA	0.145	NA	5.9645576
1056	12	123105143	123105143	C	T	exonic	KNTC1	NA	synonymous SNV	KNTC1:NM_014708:exon60:c.C6267T:p.H2089H	exonic	ENSG00000184445	NA	synonymous SNV	ENSG00000184445:ENST00000534995:exon1:c.C30T:p.H10H,ENSG00000184445:ENST00000436959:exon16:c.C30T:p.H10H,ENSG00000184445:ENST00000450485:exon35:c.C3042T:p.H1014H,ENSG00000184445:ENST00000333479:exon60:c.C6267T:p.H2089H	Score=389;Name=lod=51	NA	12q24.31	NA	NA	NA	NA	rs2270775	0.26	0.26	0.244	0.236821	0.2376	0.4425	0.1744	0.0908	0.2658	0.24	0.48	0.2	0.09	0.2332	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.79096	NA	0.25	0.23155	0.093781	NA	0.196	NA	5.9643166
1056	1	196876458	196876458	A	G	exonic	CFHR4	NA	nonsynonymous SNV	CFHR4:NM_001201550:exon5:c.A629G:p.N210S,CFHR4:NM_001201551:exon5:c.A626G:p.N209S	exonic	ENSG00000134365	NA	nonsynonymous SNV	ENSG00000134365:ENST00000367416:exon5:c.A626G:p.N209S	NA	NA	1q31.3	NA	NA	NA	NA	rs7417769	0.63	0.63	0.587	0.589058	0.6839	0.8304	0.7305	0.2095	0.6554	0.69	0.83	0.7	0.26	0.6852	0.83	0.89	T	0.0	B	0.001	B	.	.	1.000	P	.	.	1.49	T	-0.982	T	0.000	T	0.0	0.865	8.504	1.13	-0.002	0.164	3.166	0.864967	NA	NA	NA	NA	NA	0.601	NA	5.9642334
1056	8	101153024	101153024	G	A	exonic	FBXO43	NA	synonymous SNV	FBXO43:NM_001029860:exon2:c.C1458T:p.I486I	exonic	ENSG00000156509	NA	synonymous SNV	ENSG00000156509:ENST00000428847:exon2:c.C1458T:p.I486I	Score=638;Name=lod=523	NA	8q22.2	Score=898;Name=V$NFY_C	NA	NA	NA	rs1460934	0.66	0.66	0.645	0.658147	0.5557	0.7292	0.6888	0.7337	0.5665	0.57	0.73	0.67	0.71	0.6016	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.725016	NA	NA	0.545221	0.698851	NA	0.558	NA	5.9641456
1056	19	36004106	36004106	A	G	exonic	DMKN	NA	nonsynonymous SNV	DMKN:NM_001126056:exon1:c.T272C:p.V91A,DMKN:NM_001126057:exon1:c.T272C:p.V91A,DMKN:NM_001126058:exon1:c.T272C:p.V91A,DMKN:NM_001190347:exon1:c.T272C:p.V91A,DMKN:NM_001190348:exon1:c.T272C:p.V91A,DMKN:NM_001190349:exon1:c.T272C:p.V91A,DMKN:NM_033317:exon1:c.T272C:p.V91A	exonic	ENSG00000161249	NA	nonsynonymous SNV	ENSG00000161249:ENST00000339686:exon1:c.T272C:p.V91A,ENSG00000161249:ENST00000418261:exon1:c.T272C:p.V91A,ENSG00000161249:ENST00000419602:exon1:c.T272C:p.V91A,ENSG00000161249:ENST00000424570:exon1:c.T272C:p.V91A,ENSG00000161249:ENST00000429837:exon1:c.T272C:p.V91A,ENSG00000161249:ENST00000440396:exon1:c.T272C:p.V91A,ENSG00000161249:ENST00000447113:exon1:c.T272C:p.V91A,ENSG00000161249:ENST00000451297:exon1:c.T272C:p.V91A	NA	NA	19q13.12	NA	NA	NA	NA	rs4806163	0.85	0.85	0.859	0.859625	0.7922	0.8671	0.7378	0.9909	0.8303	0.79	0.89	0.74	0.99	0.8067	0.99	0.58	T	0.001	B	0.002	B	.	.	1.000	P	-0.755	N	2.62	T	-1.047	T	0.000	T	0.2	0.15	4.805	-2.29	-0.726	-0.080	6.360	0.14974	NA	0.67	0.771744	0.956423	NA	0.884	NA	5.9626894
1056	17	8076655	8076655	C	T	UTR3	TMEM107	NM_183065:c.*866G>A,NM_032354:c.*866G>A	NA	NA	UTR3	ENSG00000179029	ENST00000449985:c.*915G>A	NA	NA	NA	NA	17p13.1	NA	Name=GATA-1,TAF1,p300_(F-4),MafK_(SC-477),POU2F2,HMGN3,MafF_(M8194),Pol2,BCL11A,BCLAF1_(M33-P5B11),TAF7_(SQ-8),YY1_(C-20),TR4,MEF2A,Oct-2,CTCF,BATF,CHD2_(N-1250),JunD,Pol2(b),SIRT6,FOXA1_(C-20),STAT3,c-Jun,Sin3Ak-20,Pol2-4H8,ZNF263,KAP1,NFKB,eGFP-GATA2,BCL3,HEY1,MafK_(ab50322),SIX5,USF-1	Name=147	NA	rs3202848	0.21	0.21	0.187	0.175319	0.3708	0.1141	0.2089	0.0545	0.1769	0.37	0.1	0.25	0.04	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.847207	NA	NA	NA	NA	NA	0.304	NA	5.9625334
1056	21	43495970	43495970	G	A	intronic	UMODL1	NA	NA	NA	intronic	ENSG00000177398	NA	NA	NA	NA	NA	21q22.3	NA	Name=CTCF_(SC-5916),Rad21,CTCF	Name=4	NA	rs116951179	0.02	0.02	0.015	0.0189696	0.0378	0.001	0.0216	0.0015	0.0399	0.03	0.0017	0.03	0.002	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.669779	NA	NA	NA	NA	NA	0.014	NA	5.9622
1056	21	43496001	43496001	G	A	intronic	UMODL1	NA	NA	NA	intronic	ENSG00000177398	NA	NA	NA	NA	NA	21q22.3	NA	Name=CTCF_(SC-5916),CTCF,Rad21	Name=4	NA	rs117874798	0.02	0.02	0.015	0.0191693	0.0378	0.001	0.0231	0.0015	0.0399	0.03	0.0017	0.03	0.002	NA	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.288589	NA	NA	NA	NA	NA	0.029	NA	5.9622
1056	20	25059381	25059381	A	T	exonic	VSX1	NA	synonymous SNV	VSX1:NM_199425:exon3:c.T711A:p.P237P	exonic	ENSG00000100987	NA	synonymous SNV	ENSG00000100987:ENST00000376707:exon3:c.T711A:p.P237P	NA	NA	20p11.21	NA	NA	Name=2	NA	rs56157240	0.25	0.25	0.237	0.290535	0.2207	0.0268	0.3516	0.4992	0.3088	0.22	0.02	0.33	0.51	0.2544	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.252056	NA	NA	0.229753	0.426526	NA	0.275	NA	5.9618136
1056	16	50745199	50745199	C	T	exonic	NOD2	NA	synonymous SNV	NOD2:NM_022162:exon4:c.C1377T:p.R459R	exonic	ENSG00000167207	NA	synonymous SNV	ENSG00000167207:ENST00000300589:exon4:c.C1377T:p.R459R	Score=371;Name=lod=43	NA	16q12.1	NA	NA	NA	NA	rs2066843	0.13	0.13	0.129	0.107628	0.2475	0.0079	0.1671	0.0477	0.1053	0.24	0.0017	0.19	0.06	0.1864	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.109131	NA	NA	0.270993	0.066879	NA	0.225	NA	5.9617736
1056	4	162307060	162307060	G	T	exonic	FSTL5	NA	synonymous SNV	FSTL5:NM_001128428:exon15:c.C2353A:p.R785R,FSTL5:NM_001128427:exon16:c.C2380A:p.R794R,FSTL5:NM_020116:exon16:c.C2383A:p.R795R	exonic	ENSG00000168843	NA	synonymous SNV	ENSG00000168843:ENST00000427802:exon15:c.C2353A:p.R785R,ENSG00000168843:ENST00000536695:exon15:c.C2380A:p.R794R,ENSG00000168843:ENST00000306100:exon16:c.C2383A:p.R795R,ENSG00000168843:ENST00000379164:exon16:c.C2380A:p.R794R	NA	NA	4q32.2	NA	NA	Name=4	NA	rs17040984	0.2	0.2	0.203	0.182109	0.2256	0.3175	0.1657	0.0416	0.1994	0.23	0.32	0.2	0.04	0.227	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.615113	NA	NA	0.252674	0.073309	NA	0.246	NA	5.9613926
1056	3	53125922	53125922	T	C	exonic	RFT1	NA	synonymous SNV	RFT1:NM_052859:exon13:c.A1623G:p.T541T	exonic	ENSG00000163933	NA	synonymous SNV	ENSG00000163933:ENST00000394738:exon12:c.A1506G:p.T502T,ENSG00000163933:ENST00000296292:exon13:c.A1623G:p.T541T	NA	NA	3p21.1	Score=905;Name=V$OCT1_06	NA	NA	NA	rs11242	0.55	0.55	0.512	0.490415	0.5964	0.746	0.585	0.174	0.4785	0.59	0.73	0.59	0.23	0.551	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.049834	NA	NA	0.557907	0.25488	NA	0.435	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000082329.1;CLNDSDB=.;CLNDSDBID=.	5.9613596
1056	7	44579180	44579180	G	C	exonic	NPC1L1	NA	synonymous SNV	NPC1L1:NM_001101648:exon2:c.C816G:p.L272L,NPC1L1:NM_013389:exon2:c.C816G:p.L272L	exonic	ENSG00000015520	NA	synonymous SNV	ENSG00000015520:ENST00000289547:exon2:c.C816G:p.L272L,ENSG00000015520:ENST00000381160:exon2:c.C816G:p.L272L,ENSG00000015520:ENST00000423141:exon2:c.C816G:p.L272L,ENSG00000015520:ENST00000546276:exon2:c.C816G:p.L272L	NA	Name=Cholesterol, total,LDL cholesterol	7p13	NA	NA	NA	NA	rs2072183	0.27	0.27	0.243	0.247204	0.2336	0.374	0.245	0.1952	0.2025	0.24	0.42	0.24	0.18	0.2477	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.352968	NA	NA	0.224186	0.220381	NA	0.188	NA	5.9611806
1056	2	211456639	211456639	C	T	exonic	CPS1	NA	synonymous SNV	CPS1:NM_001875:exon10:c.C1032T:p.T344T,CPS1:NM_001122633:exon11:c.C1050T:p.T350T	exonic	ENSG00000021826	NA	synonymous SNV	ENSG00000021826:ENST00000233072:exon10:c.C1032T:p.T344T,ENSG00000021826:ENST00000430249:exon11:c.C1050T:p.T350T	Score=657;Name=lod=622	NA	2q34	NA	NA	NA	NA	rs2229589	0.57	0.57	0.568	0.591254	0.5646	0.5585	0.4914	0.6679	0.6196	0.55	0.53	0.48	0.7	0.5736	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.86904	NA	NA	0.567558	0.656151	NA	NA	CLINSIG=probable-non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000116830.2|RCV000124589.1;CLNDSDB=.|.;CLNDSDBID=.|.	5.9609086
1056	19	4929413	4929413	T	C	exonic	UHRF1	NA	unknown	UNKNOWN	ncRNA_exonic	ENSG00000034063	NA	NA	NA	Score=343;Name=lod=33	NA	19p13.3	NA	NA	Name=37	NA	rs2251520	0.26	0.26	0.264	0.320288	0.2913	0.0913	0.4193	0.4259	0.3732	0.27	0.07	0.39	0.4	0.3034	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.271848	NA	NA	0.277973	0.385315	NA	0.254	NA	5.9606603
1056	20	25059546	25059546	T	C	exonic	VSX1	NA	synonymous SNV	VSX1:NM_001256271:exon3:c.A546G:p.A182A,VSX1:NM_001256272:exon3:c.A546G:p.A182A,VSX1:NM_014588:exon3:c.A546G:p.A182A,VSX1:NM_199425:exon3:c.A546G:p.A182A	exonic	ENSG00000100987	NA	synonymous SNV	ENSG00000100987:ENST00000376707:exon3:c.A546G:p.A182A,ENSG00000100987:ENST00000376709:exon3:c.A546G:p.A182A,ENSG00000100987:ENST00000409285:exon3:c.A546G:p.A182A,ENSG00000100987:ENST00000409958:exon3:c.A546G:p.A182A,ENSG00000100987:ENST00000424574:exon3:c.A546G:p.A182A,ENSG00000100987:ENST00000429762:exon3:c.A546G:p.A182A,ENSG00000100987:ENST00000444511:exon3:c.A546G:p.A182A,ENSG00000100987:ENST00000451258:exon3:c.A546G:p.A182A	NA	NA	20p11.21	Score=852;Name=V$CEBP_C	NA	NA	NA	rs12480307	0.25	0.25	0.235	0.290335	0.2207	0.0268	0.3501	0.4992	0.3088	0.22	0.02	0.33	0.51	0.2543	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.950366	NA	NA	0.231047	0.433046	ID=COSM1410857,COSM1410856;OCCURENCE=1(large_intestine)	0.268	NA	5.9606196
1056	22	37603051	37603051	C	T	exonic	SSTR3	NA	synonymous SNV	SSTR3:NM_001051:exon2:c.G792A:p.A264A	exonic	ENSG00000183473	NA	synonymous SNV	ENSG00000183473:ENST00000328544:exon2:c.G792A:p.A264A,ENSG00000183473:ENST00000402501:exon2:c.G792A:p.A264A	NA	NA	22q13.1	Score=812;Name=V$RFX1_02	NA	NA	NA	rs229569	0.4	0.4	0.398	0.390775	0.2227	0.5863	0.3343	0.4811	0.2802	0.22	0.63	0.33	0.44	0.2806	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.001708	NA	NA	0.202791	0.432365	NA	0.283	NA	5.9605756
1056	4	38829163	38829163	A	C	exonic	TLR6	NA	synonymous SNV	TLR6:NM_006068:exon2:c.T1932G:p.A644A	exonic	ENSG00000174130	NA	synonymous SNV	ENSG00000174130:ENST00000381950:exon1:c.T1932G:p.A644A,ENSG00000174130:ENST00000436693:exon2:c.T1932G:p.A644A	Score=499;Name=lod=142	NA	4p14	NA	NA	NA	NA	rs5743818	0.12	0.12	0.098	0.0896565	0.2445	0.0089	0.0879	0.0416	0.0798	0.27	0.02	0.1	0.04	0.1929	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.113661	NA	NA	0.268837	0.081026	NA	0.13	NA	5.9604296
1056	17	73266180	73266180	G	C	intronic	MIF4GD	NA	NA	NA	intronic	ENSG00000125457	NA	NA	NA	NA	NA	17q25.1	NA	Name=HA-E2F1	Name=7	NA	rs3744232	0.08	0.08	0.077	0.104433	0.001	0.0992	0.072	0.2156	0.089	0.0026	0.05	0.07	0.25	0.0358	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.661463	NA	NA	0.002791	0.156151	NA	0.101	NA	5.960409
1056	4	15569018	15569018	G	A	exonic	CC2D2A	NA	synonymous SNV	CC2D2A:NM_001080522:exon26:c.G3201A:p.S1067S	exonic	ENSG00000048342	NA	synonymous SNV	ENSG00000048342:ENST00000389652:exon23:c.G3054A:p.S1018S,ENSG00000048342:ENST00000413206:exon25:c.G3201A:p.S1067S,ENSG00000048342:ENST00000424120:exon25:c.G3201A:p.S1067S,ENSG00000048342:ENST00000503292:exon26:c.G3201A:p.S1067S	NA	NA	4p15.32	NA	NA	NA	NA	rs73125627	0.16	0.16	0.144	0.151757	0.2475	0.0724	0.1873	0.1051	0.1728	0.25	0.06	0.2	0.12	0.212	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.535438	NA	NA	0.247421	0.12069	ID=COSM1131209;OCCURENCE=1(prostate)	0.152	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000114173.2;CLNDSDB=.;CLNDSDBID=.	5.9597456
1056	2	202082459	202082459	T	A	exonic	CASP10	NA	nonsynonymous SNV	CASP10:NM_001206524:exon8:c.T1363A:p.L455I,CASP10:NM_001230:exon8:c.T1435A:p.L479I,CASP10:NM_032977:exon10:c.T1564A:p.L522I	exonic	ENSG00000003400	NA	nonsynonymous SNV	ENSG00000003400:ENST00000313728:exon8:c.T1363A:p.L455I,ENSG00000003400:ENST00000346817:exon8:c.T1435A:p.L479I,ENSG00000003400:ENST00000286186:exon10:c.T1564A:p.L522I	NA	NA	2q33.1	NA	NA	NA	NA	rs13006529	0.35	0.35	0.335	0.329073	0.4742	0.2073	0.3876	0.3328	0.2587	0.47	0.18	0.4	0.33	0.4099	0.49	0.29	T	0.358	B	0.086	B	0.034	N	1.000	P	.	.	4.43	T	-0.950	T	0.000	T	0.043	1.915	12.36	-1.39	-0.138	0.247	1.083	1.914818	1.914818	0.18	0.489651	0.351112	NA	0.304	NA	5.9595824
1056	12	12247616	12247616	T	C	exonic	BCL2L14	NA	synonymous SNV	BCL2L14:NM_138722:exon5:c.T697C:p.L233L,BCL2L14:NM_138723:exon5:c.T697C:p.L233L	exonic	ENSG00000121380	NA	synonymous SNV	ENSG00000121380:ENST00000308721:exon5:c.T697C:p.L233L,ENSG00000121380:ENST00000396367:exon5:c.T697C:p.L233L,ENSG00000121380:ENST00000589718:exon6:c.T697C:p.L233L,ENSG00000121380:ENST00000586576:exon7:c.T796C:p.L266L	NA	NA	12p13.2	Score=901;Name=V$GATA_C	NA	NA	NA	rs11054683	0.18	0.18	0.178	0.160144	0.2525	0.0188	0.1671	0.2216	0.1227	0.26	0.01	0.2	0.25	0.208	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.24269	NA	NA	0.246628	0.210622	NA	0.232	NA	5.9595386
1056	16	23489711	23489711	C	G	exonic	GGA2	NA	nonsynonymous SNV	GGA2:NM_015044:exon13:c.G1270C:p.A424P	exonic	ENSG00000103365	NA	nonsynonymous SNV	ENSG00000103365:ENST00000309859:exon13:c.G1270C:p.A424P	NA	NA	16p12.2	NA	NA	NA	NA	rs1135045	0.7	0.7	0.703	0.676318	0.8111	0.6994	0.7233	0.5219	0.6892	0.81	0.68	0.75	0.54	0.7564	0.81	0.48	T	0.0	B	0.0	B	0.520	N	0.869	P	-1.87	N	2.51	T	-1.004	T	0.000	T	0.052	-0.727	0.886	2.1	0.139	0.670	6.247	-0.72695	NA	0.35	0.806395	0.580564	NA	0.746	NA	5.9594384
1056	19	4534014	4534014	G	A	intronic	PLIN5	NA	NA	NA	exonic	ENSG00000214456	NA	nonsynonymous SNV	ENSG00000214456:ENST00000592610:exon1:c.C73T:p.P25S,ENSG00000214456:ENST00000586133:exon2:c.C73T:p.P25S	NA	NA	19p13.3	NA	Name=STAT3	NA	NA	rs11085080	0.06	0.06	0.067	0.0601038	0.0656	NA	0.0548	0.1089	0.0542	0.07	0.0017	0.07	0.12	0.0784	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.137713	NA	NA	0.063684	0.112346	NA	0.072	NA	5.9589827
1056	1	1896440	1896440	G	A	exonic	KIAA1751	NA	synonymous SNV	KIAA1751:NM_001080484:exon13:c.C1462T:p.L488L	exonic	ENSG00000142609	NA	synonymous SNV	ENSG00000142609:ENST00000604159:exon2:c.C217T:p.L73L	Score=409;Name=lod=61	NA	1p36.33	NA	NA	NA	NA	rs16824585	0.25	0.25	0.247	0.216653	0.2276	0.2718	0.2032	0.2489	0.1145	0.24	0.29	0.21	0.24	0.2353	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.475931	NA	NA	0.244927	0.231803	NA	0.319	NA	5.9588396
1056	17	648157	648157	G	A	exonic	GEMIN4	NA	synonymous SNV	GEMIN4:NM_015721:exon2:c.C3126T:p.I1042I	exonic	ENSG00000179409	NA	synonymous SNV	ENSG00000179409:ENST00000576778:exon1:c.C3093T:p.I1031I,ENSG00000179409:ENST00000319004:exon2:c.C3126T:p.I1042I	Score=516;Name=lod=166	NA	17p13.3	NA	NA	NA	NA	rs1045481	0.16	0.16	0.148	0.158546	0.2455	0.122	0.1772	0.0545	0.2342	0.24	0.13	0.2	0.05	0.2118	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.472232	NA	NA	0.25072	0.09116	NA	0.167	NA	5.9586466
1056	21	46705621	46705621	G	A	exonic	POFUT2	NA	synonymous SNV	POFUT2:NM_015227:exon2:c.C354T:p.P118P,POFUT2:NM_133635:exon2:c.C354T:p.P118P	exonic	ENSG00000186866	NA	synonymous SNV	ENSG00000186866:ENST00000331343:exon2:c.C354T:p.P118P,ENSG00000186866:ENST00000334538:exon2:c.C354T:p.P118P,ENSG00000186866:ENST00000349485:exon2:c.C354T:p.P118P	NA	NA	21q22.3	Score=760;Name=V$MEF2_01	NA	NA	NA	rs2297285	0.17	0.17	0.155	0.163339	0.2485	0.1776	0.1196	0.0159	0.2914	0.25	0.2	0.14	0.02	0.2136	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.221784	NA	NA	0.246047	0.051521	NA	0.138	NA	5.9585196
1056	19	4929473	4929473	A	G	exonic	UHRF1	NA	unknown	UNKNOWN	ncRNA_exonic	ENSG00000034063	NA	NA	NA	Score=486;Name=lod=126	NA	19p13.3	NA	NA	Name=37	NA	rs2123731	0.27	0.27	0.255	0.320687	0.2922	0.0903	0.4193	0.4274	0.3732	0.27	0.07	0.39	0.41	0.3034	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.879747	NA	NA	0.279267	0.391204	NA	0.268	NA	5.9584663
1056	6	41752598	41752598	C	T	intronic	PRICKLE4	NA	NA	NA	intronic	ENSG00000124593,ENSG00000137218	NA	NA	NA	NA	NA	6p21.1	NA	Name=GATA3_(SC-268),GATA-2,eGFP-GATA2	Name=23	NA	rs114793773	0.02	0.02	0.015	0.0157748	0.0417	0.001	0.0432	0.0015	0.0041	0.04	NA	0.04	0.002	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.360438	NA	NA	NA	NA	NA	0.014	NA	5.9583
1056	11	280816	280816	A	T	exonic	NLRP6	NA	nonsynonymous SNV	NLRP6:NM_001276700:exon4:c.A1082T:p.Y361F,NLRP6:NM_138329:exon4:c.A1082T:p.Y361F	exonic	ENSG00000174885	NA	nonsynonymous SNV	ENSG00000174885:ENST00000312165:exon4:c.A1082T:p.Y361F,ENSG00000174885:ENST00000534750:exon4:c.A1082T:p.Y361F	NA	NA	11p15.5	NA	NA	NA	NA	rs7482965	0.65	0.65	0.181	0.700879	0.8807	0.2877	0.8228	0.8169	0.6984	0.81	0.25	0.81	0.75	0.7933	0.81	0.67	T	0.0	B	0.001	B	0.021	N	1.000	P	0.265	N	-1.22	T	-0.950	T	0.000	T	0.153	-1.108	0.135	3.52	0.491	-0.170	7.805	-1.108399	NA	0.51	0.701163	0.613936	NA	NA	NA	5.9581704
1056	6	168349011	168349011	C	T	exonic	MLLT4	NA	synonymous SNV	MLLT4:NM_001207008:exon27:c.C3612T:p.I1204I,MLLT4:NM_001040000:exon28:c.C3663T:p.I1221I	exonic	ENSG00000130396	NA	synonymous SNV	ENSG00000130396:ENST00000344191:exon28:c.C3663T:p.I1221I,ENSG00000130396:ENST00000392108:exon28:c.C3663T:p.I1221I,ENSG00000130396:ENST00000392112:exon28:c.C3612T:p.I1204I,ENSG00000130396:ENST00000400822:exon28:c.C3660T:p.I1220I,ENSG00000130396:ENST00000447894:exon28:c.C3663T:p.I1221I,ENSG00000130396:ENST00000351017:exon29:c.C3684T:p.I1228I,ENSG00000130396:ENST00000366806:exon29:c.C3663T:p.I1221I	Score=502;Name=lod=146	NA	6q27	NA	NA	NA	NA	rs9364371	0.23	0.23	0.208	0.237819	0.2296	0.3433	0.2493	0.1135	0.2975	0.23	0.32	0.23	0.12	0.2496	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.515461	1.515461	NA	0.229302	0.138675	ID=COSM150218;OCCURENCE=1(stomach)	0.181	NA	5.9581646
1056	9	19341045	19341045	A	G	exonic	DENND4C	NA	synonymous SNV	DENND4C:NM_017925:exon20:c.A2790G:p.A930A	exonic	ENSG00000137145	NA	synonymous SNV	ENSG00000137145:ENST00000540671:exon7:c.A72G:p.A24A,ENSG00000137145:ENST00000380432:exon16:c.A2082G:p.A694A,ENSG00000137145:ENST00000307015:exon17:c.A510G:p.A170A,ENSG00000137145:ENST00000602925:exon20:c.A2790G:p.A930A,ENSG00000137145:ENST00000434457:exon21:c.A2937G:p.A979A	Score=374;Name=lod=44	NA	9p22.1	NA	NA	NA	NA	rs928128	0.21	0.21	0.215	0.213858	0.2535	0.0159	0.2046	0.354	0.1943	0.23	0.02	0.21	0.37	0.2196	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.329775	NA	NA	0.236047	0.318883	ID=COSM1461658;OCCURENCE=1(large_intestine)	0.261	NA	5.9575196
1056	9	133914570	133914570	G	A	exonic	LAMC3	NA	synonymous SNV	LAMC3:NM_006059:exon6:c.G1218A:p.T406T	exonic	ENSG00000050555	NA	synonymous SNV	ENSG00000050555:ENST00000361069:exon6:c.G1218A:p.T406T	NA	NA	9q34.12	NA	NA	NA	NA	rs2293518	0.18	0.18	0.17	0.154952	0.2445	0.1399	0.2061	0.1104	0.1022	0.22	0.14	0.23	0.13	0.2118	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.546617	2.546617	NA	0.253605	0.114616	ID=COSM1180464;OCCURENCE=1(prostate)	0.167	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117456.2;CLNDSDB=.;CLNDSDBID=.	5.9567616
1056	10	119026186	119026186	T	G	intronic	SLC18A2	NA	NA	NA	intronic	ENSG00000165646	NA	NA	NA	Score=399;Name=lod=56	NA	10q25.3	NA	NA	Name=5	NA	rs11568725	0.01	0.01	0.014	0.0107827	0.0219	NA	0.0303	0.0023	0.0082	0.02	NA	0.04	0.002	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.996972	NA	NA	0.021384	0.002168	NA	NA	NA	5.956716
1056	22	30765502	30765502	G	A	exonic	CCDC157	NA	synonymous SNV	CCDC157:NM_001017437:exon4:c.G330A:p.A110A	exonic	ENSG00000187860	NA	synonymous SNV	ENSG00000187860:ENST00000445005:exon3:c.G330A:p.A110A,ENSG00000187860:ENST00000338306:exon4:c.G330A:p.A110A,ENSG00000187860:ENST00000405659:exon4:c.G330A:p.A110A,ENSG00000187860:ENST00000430839:exon4:c.G330A:p.A110A	NA	NA	22q12.2	Score=697;Name=V$P53_01	NA	NA	NA	rs5749080	0.17	0.17	0.182	0.153355	0.2545	0.1458	0.1571	0.1324	0.0828	0.24	0.12	0.15	0.15	0.1986	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.408094	NA	NA	0.257093	0.154335	NA	0.268	NA	5.9564736
1056	9	20981799	20981799	G	A	intronic	FOCAD	NA	NA	NA	intronic	ENSG00000188352	NA	NA	NA	Score=325;Name=lod=28	NA	9p21.3	NA	NA	Name=85	NA	rs72703998	0.02	0.02	0.012	0.0171725	0.0437	NA	0.0159	0.0023	0.0286	0.04	NA	0.02	0.01	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.970899	1.970899	NA	NA	NA	NA	0.014	NA	5.9563
1056	12	52661302	52661302	C	A	intergenic	KRT7,KRT81	dist=18593;dist=18395	NA	NA	intronic	ENSG00000170442	NA	NA	NA	Score=628;Name=lod=476	NA	12q13.13	NA	NA	NA	NA	rs1870224	0.91	0.91	0.927	0.910343	0.8429	0.9881	0.8473	0.9894	0.8374	0.84	0.99	0.82	0.98	0.8677	0.99	0	D	.	.	.	.	.	.	.	.	.	.	.	.	-1.011	T	0.000	T	.	-1.107	0.137	-2.38	-0.640	0.604	7.869	-1.106675	NA	NA	NA	NA	NA	0.978	NA	5.9560667
1056	19	47200875	47200875	C	T	intronic	PRKD2	NA	NA	NA	intronic	ENSG00000105287	NA	NA	NA	NA	NA	19q13.32	NA	Name=HMGN3,Egr-1,IRF1,CCNT2,ZBTB7A_(SC-34508)	Name=120	NA	rs76308698	0.02	0.02	0.021	0.0111821	0.0447	NA	0.0115	NA	0.0031	0.05	NA	0.01	NA	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.328971	1.328971	NA	NA	NA	NA	0.007	NA	5.9553
1056	22	30220925	30220925	C	T	intronic	ASCC2	NA	NA	NA	intronic	ENSG00000100325	NA	NA	NA	Score=378;Name=lod=46	NA	22q12.2	NA	NA	Name=4	NA	rs112626077	0.06	0.06	0.048	0.0607029	0.0447	0.0853	0.0735	0.0227	0.0941	0.05	0.1	0.06	0.03	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.244432	3.244432	NA	NA	NA	NA	0.051	NA	5.9553
1057	13	41438067	41438067	G	A	ncRNA_intronic	TPTE2P5	NA	NA	NA	ncRNA_intronic	ENSG00000168852	NA	NA	NA	NA	NA	13q14.11	NA	Name=Rad21	Name=2	NA	rs9315791	0.45	0.45	0.405	0.42512	0.7117	0.1706	0.67	0.1664	0.5685	0.73	0.19	0.64	0.18	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.755808	NA	NA	NA	NA	NA	0.478	NA	5.9549666
1057	1	216050980	216050980	C	T	intronic	USH2A	NA	NA	NA	intronic	ENSG00000042781	NA	NA	NA	Score=506;Name=lod=152	NA	1q41	NA	NA	Name=4	NA	rs56301415	0.07	0.07	0.057	0.077476	0.0457	0.1448	0.0576	0.0582	0.0808	0.04	0.12	0.05	0.06	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.536602	3.536602	NA	NA	NA	NA	0.051	NA	5.9543
1057	11	64714780	64714780	C	A	intronic	C11orf85	NA	NA	NA	intronic	ENSG00000168070	NA	NA	NA	NA	NA	11q13.1	NA	Name=CTCF	Name=34	NA	rs7482817	0.04	0.04	0.041	0.0403355	0.0467	NA	0.0346	0.0598	0.0532	0.05	NA	0.04	0.05	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.719416	NA	NA	NA	NA	NA	0.022	NA	5.9533
1057	11	87908346	87908346	C	G	intronic	RAB38	NA	NA	NA	intronic	ENSG00000123892	NA	NA	NA	Score=558;Name=lod=246	NA	11q14.2	NA	Name=GATA-2	Name=68	NA	rs302647	0.27	0.27	0.26	0.240415	0.337	0.3194	0.281	0.0968	0.2249	0.35	0.27	0.29	0.12	0.4012	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.082742	2.082742	NA	0.309097	0.139672	NA	0.29	NA	5.952703
1057	5	7869235	7869235	T	C	UTR5	MTRR	NM_024010:c.-12T>C,NM_002454:c.-1673T>C	NA	NA	UTR5	ENSG00000124275	ENST00000264668:c.-12T>C,ENST00000513439:c.-1673T>C	NA	NA	NA	NA	5p15.31	NA	Name=Pol2-4H8,E2F1,c-Fos,E2F6,Sin3Ak-20,YY1_(C-20),HA-E2F1,YY1,Ini1,SP1,Mxi1_(bHLH),RFX5_(N-494),Pol2,GABP,POU2F2,E2F4,SP2_(SC-643),NF-YA,E2F6_(H-50),ETS1,TAF1,CHD2_(N-1250),GTF2F1_(RAP-74),CEBPB,IRF1,TBP,TCF12,Nrf1,EBF1_(C-8),Oct-2,PAX5-C20,NF-YB,NFKB,HEY1,IRF3,ELF1_(SC-631),AP-2gamma,c-Myc,Max	Name=148	NA	rs72716536	0.2	0.2	0.181	0.229034	0.1173	0.1538	0.3242	0.3646	0.1708	0.11	0.17	0.27	0.33	0.1586	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.576992	NA	NA	0.104767	0.315706	NA	0.268	NA	5.9526664
1057	1	65117762	65117762	A	G	intronic	CACHD1	NA	NA	NA	intronic	ENSG00000158966	NA	NA	NA	NA	NA	1p31.3	Score=795;Name=V$BACH1_01	NA	Name=6	NA	rs41302756	0.09	0.09	0.074	0.103235	0.0477	0.1915	0.0749	0.0703	0.1339	0.05	0.17	0.08	0.07	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.46722	NA	NA	NA	NA	NA	0.181	NA	5.9523
1057	3	12299945	12299945	G	C	intergenic	SYN2,PPARG	dist=66413;dist=29404	NA	NA	ncRNA_exonic	ENSG00000236062	NA	NA	NA	Score=467;Name=lod=105	NA	3p25.2	NA	Name=CHD2_(N-1250)	NA	NA	rs13067702	0.03	0.03	0.031	0.0389377	0.0477	0.0228	0.0159	0.025	0.0818	0.05	0.03	0.03	0.02	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.108548	NA	NA	NA	NA	NA	0.036	NA	5.9523
1057	12	6138595	6138595	C	T	exonic	VWF	NA	synonymous SNV	VWF:NM_000552:exon22:c.G2880A:p.R960R	exonic	ENSG00000110799	NA	synonymous SNV	ENSG00000110799:ENST00000261405:exon22:c.G2880A:p.R960R	Score=448;Name=lod=88	NA	12p13.31	NA	NA	NA	NA	rs1800380	0.18	0.18	0.174	0.179113	0.2555	0.004	0.1902	0.3079	0.0992	0.25	0.0017	0.22	0.27	0.2081	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.60842	NA	NA	0.251395	0.311621	NA	0.159	NA	5.9516716
1057	2	219252208	219252208	C	T	intronic	SLC11A1	NA	NA	NA	intronic	ENSG00000018280	NA	NA	NA	NA	NA	2q35	NA	Name=FOXA1_(C-20),KAP1,SP1,HNF4G_(SC-6558),ELF1_(SC-631),FOXA1_(SC-101058),HEY1,p300	Name=125	NA	rs3731863	0.08	0.08	0.084	0.103834	0.0487	0.1111	0.0562	0.1604	0.1104	0.05	0.09	0.07	0.13	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.490362	NA	NA	NA	NA	NA	0.08	NA	5.9513
1057	6	151773831	151773831	C	T	intronic	C6orf211	NA	NA	NA	intronic	ENSG00000146476	NA	NA	NA	NA	NA	6q25.1	NA	Name=Pol2,HA-E2F1,Pol2-4H8,TAF1,ZBTB7A_(SC-34508)	Name=3	NA	rs111270458	0.1	0.1	0.089	0.110823	0.0487	0.1577	0.0447	0.1823	0.0767	0.05	0.14	0.04	0.16	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.930482	1.930482	NA	NA	NA	NA	0.087	NA	5.9513
1057	7	93519390	93519390	C	T	intronic	TFPI2	NA	NA	NA	intronic	ENSG00000105825,ENSG00000127928	NA	NA	NA	NA	NA	7q21.3	NA	Name=CTCF,Rad21,TBP	Name=98	NA	rs59999573	0.1	0.1	0.087	0.107029	0.0487	0.1468	0.147	0.1142	0.0879	0.05	0.17	0.12	0.1	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.296408	NA	NA	NA	NA	NA	0.08	NA	5.9513
1057	18	6889973	6889973	A	G	exonic	ARHGAP28	NA	synonymous SNV	ARHGAP28:NM_001010000:exon12:c.A1146G:p.P382P	exonic	ENSG00000088756	NA	synonymous SNV	ENSG00000088756:ENST00000579689:exon5:c.A534G:p.P178P,ENSG00000088756:ENST00000314319:exon11:c.A1146G:p.P382P,ENSG00000088756:ENST00000418986:exon11:c.A1146G:p.P382P,ENSG00000088756:ENST00000532996:exon11:c.A1092G:p.P364P,ENSG00000088756:ENST00000419673:exon12:c.A1146G:p.P382P,ENSG00000088756:ENST00000531294:exon12:c.A1131G:p.P377P,ENSG00000088756:ENST00000262227:exon13:c.A1467G:p.P489P,ENSG00000088756:ENST00000383472:exon13:c.A1623G:p.P541P,ENSG00000088756:ENST00000400091:exon13:c.A1623G:p.P541P	Score=559;Name=lod=249	NA	18p11.31	Score=885;Name=V$E2F_02	NA	NA	NA	rs4239328	0.59	0.59	0.59	0.560903	0.5736	0.6052	0.5331	0.5545	0.5307	0.56	0.68	0.56	0.54	0.5705	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.342138	1.342138	NA	0.571977	0.568089	NA	0.558	NA	5.9505896
1057	22	37603390	37603390	C	T	exonic	SSTR3	NA	synonymous SNV	SSTR3:NM_001051:exon2:c.G453A:p.S151S	exonic	ENSG00000183473	NA	synonymous SNV	ENSG00000183473:ENST00000328544:exon2:c.G453A:p.S151S,ENSG00000183473:ENST00000402501:exon2:c.G453A:p.S151S	NA	NA	22q13.1	Score=907;Name=V$AP2_Q6	NA	NA	NA	rs86582	0.4	0.4	0.407	0.390575	0.2217	0.5863	0.3343	0.4811	0.2802	0.22	0.63	0.33	0.44	0.2871	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.803003	NA	NA	0.20749	0.4335	NA	0.326	NA	5.9503766
1057	1	47609407	47609407	C	T	intronic	CYP4A22	NA	NA	NA	ncRNA_intronic	ENSG00000225506	NA	NA	NA	NA	NA	1p33	NA	Name=CTCF	Name=11	NA	rs10890469	0.17	0.17	0.173	0.195288	0.1153	0.247	0.134	0.1974	0.2648	0.12	0.26	0.13	0.2	0.154	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.633062	NA	NA	0.113721	0.206083	NA	0.116	NA	5.9503123
1057	7	7217867	7217867	G	A	intergenic	LOC100131257,C1GALT1	dist=81450;dist=4379	NA	NA	ncRNA_exonic	ENSG00000244167	NA	NA	NA	NA	NA	7p22.1	NA	Name=STAT3,GATA3_(SC-268)	Name=23	NA	rs55637396	0.08	0.08	0.087	0.0716853	0.0497	0.1677	0.0389	0.0635	0.0297	0.05	0.17	0.04	0.05	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.175922	NA	NA	NA	NA	NA	0.13	NA	5.9503
1057	11	74457051	74457051	C	T	intergenic	CHRDL2,RNF169	dist=14865;dist=2862	NA	NA	ncRNA_exonic	ENSG00000227615	NA	NA	NA	Score=715;Name=lod=1072	NA	11q13.4	NA	Name=CTCF_(SC-5916)	NA	NA	rs11543335	0.02	0.02	0.017	0.0247604	0.0497	0.001	0.0231	NA	0.0583	0.05	NA	0.02	NA	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.169948	2.169948	NA	NA	NA	NA	0.007	NA	5.9503
1057	17	18872521	18872521	A	G	intronic	SLC5A10	NA	NA	NA	UTR3	ENSG00000188522	ENST00000388995:c.*2151T>C	NA	NA	NA	NA	17p11.2	NA	Name=GABP,Pol2	Name=7	NA	rs2074273	0.1	0.1	0.094	0.148562	0.0656	0.0962	0.0476	0.1672	0.3344	0.05	0.11	0.06	0.18	0.0999	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.982932	NA	NA	0.051628	0.137313	NA	0.101	NA	5.9495387
1057	17	64961276	64961276	C	A	intronic	CACNG4	NA	NA	NA	intronic	ENSG00000075461	NA	NA	NA	NA	NA	17q24.2	NA	Name=HA-E2F1,c-Myc	Name=16	NA	rs112802203	0.46	0.46	0.096	NA	NA	NA	NA	NA	NA	0.46	0.49	0.48	0.41	0.0508	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.066259	NA	NA	NA	NA	NA	NA	NA	5.9492
1057	8	113364696	113364696	A	G	exonic	CSMD3	NA	synonymous SNV	CSMD3:NM_052900:exon38:c.T5892C:p.Y1964Y,CSMD3:NM_198123:exon39:c.T6204C:p.Y2068Y,CSMD3:NM_198124:exon40:c.T6084C:p.Y2028Y	exonic	ENSG00000164796	NA	synonymous SNV	ENSG00000164796:ENST00000339701:exon24:c.T4014C:p.Y1338Y,ENSG00000164796:ENST00000352409:exon37:c.T5994C:p.Y1998Y,ENSG00000164796:ENST00000455883:exon38:c.T5892C:p.Y1964Y,ENSG00000164796:ENST00000297405:exon39:c.T6204C:p.Y2068Y,ENSG00000164796:ENST00000343508:exon40:c.T6084C:p.Y2028Y	Score=673;Name=lod=727	NA	8q23.3	NA	NA	NA	NA	rs11778209	0.26	0.26	0.247	0.2502	0.2435	0.3938	0.3156	0.0673	0.3098	0.24	0.42	0.32	0.08	0.2513	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.997699	NA	NA	0.222843	0.084657	NA	0.268	NA	5.9490236
1057	1	200867492	200867492	C	G	exonic	C1orf106	NA	synonymous SNV	C1orf106:NM_018265:exon2:c.C261G:p.P87P	exonic	ENSG00000163362	NA	synonymous SNV	ENSG00000163362:ENST00000367342:exon2:c.C219G:p.P73P	NA	NA	1q32.1	NA	NA	Name=20	NA	rs2271018	0.21	0.21	0.169	0.198283	0.2495	0.1577	0.3112	0.115	0.2198	0.26	0.17	0.26	0.12	0.2327	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.749136	NA	NA	0.235465	0.155016	NA	0.275	NA	5.9490016
1057	5	1880865	1880865	T	C	exonic	IRX4	NA	synonymous SNV	IRX4:NM_016358:exon3:c.A381G:p.P127P	exonic	ENSG00000113430	NA	synonymous SNV	ENSG00000113430:ENST00000231357:exon3:c.A381G:p.P127P,ENSG00000113430:ENST00000508261:exon3:c.A381G:p.P127P,ENSG00000113430:ENST00000511126:exon3:c.A381G:p.P127P,ENSG00000113430:ENST00000505790:exon4:c.A381G:p.P127P,ENSG00000113430:ENST00000513692:exon4:c.A381G:p.P127P	Score=511;Name=lod=159	NA	5p15.33	NA	NA	NA	NA	rs4975753	0.29	0.29	0.263	0.297324	0.2276	0.3313	0.3184	0.3404	0.2607	0.23	0.31	0.29	0.35	0.2593	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.080935	NA	NA	0.231512	0.295733	NA	0.362	NA	5.9482546
1057	17	71410891	71410891	C	T	exonic	SDK2	NA	synonymous SNV	SDK2:NM_001144952:exon18:c.G2376A:p.T792T	exonic	ENSG00000069188	NA	synonymous SNV	ENSG00000069188:ENST00000388726:exon18:c.G2376A:p.T792T,ENSG00000069188:ENST00000392650:exon18:c.G2376A:p.T792T	NA	NA	17q25.1	Score=863;Name=V$RFX1_02	NA	NA	NA	rs12386051	0.27	0.27	0.278	0.2498	0.2495	0.4831	0.2205	0.0552	0.2935	0.25	0.49	0.22	0.07	0.2413	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.666795	NA	NA	0.227674	0.103041	ID=COSM437277;OCCURENCE=1(breast)	0.268	NA	5.9481926
1057	6	32188297	32188297	G	C	exonic	NOTCH4	NA	synonymous SNV	NOTCH4:NM_004557:exon6:c.C1044G:p.G348G	exonic	ENSG00000204301	NA	synonymous SNV	ENSG00000204301:ENST00000375023:exon6:c.C1044G:p.G348G	Score=517;Name=lod=168	NA	6p21.32	NA	NA	NA	NA	rs423023	0.4	0.4	NA	0.320288	0.3996	0.2976	0.3372	0.2413	0.3569	0.44	0.41	0.42	0.32	0.3189	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.228849	NA	NA	NA	NA	NA	0.355	NA	5.9481666
1057	2	192160875	192160875	C	T	exonic	MYO1B	NA	synonymous SNV	MYO1B:NM_001130158:exon3:c.C174T:p.Y58Y,MYO1B:NM_001161819:exon3:c.C174T:p.Y58Y,MYO1B:NM_012223:exon3:c.C174T:p.Y58Y	exonic	ENSG00000128641	NA	synonymous SNV	ENSG00000128641:ENST00000392316:exon2:c.C174T:p.Y58Y,ENSG00000128641:ENST00000304164:exon3:c.C174T:p.Y58Y,ENSG00000128641:ENST00000339514:exon3:c.C174T:p.Y58Y,ENSG00000128641:ENST00000392318:exon3:c.C174T:p.Y58Y,ENSG00000128641:ENST00000418908:exon3:c.C174T:p.Y58Y,ENSG00000128641:ENST00000420448:exon3:c.C174T:p.Y58Y,ENSG00000128641:ENST00000438652:exon3:c.C174T:p.Y58Y,ENSG00000128641:ENST00000451437:exon3:c.C174T:p.Y58Y	Score=381;Name=lod=47	NA	2q32.3	NA	NA	Name=5	NA	rs4853575	0.54	0.54	0.521	0.509385	0.5835	0.6567	0.5865	0.3321	0.4663	0.58	0.66	0.53	0.36	0.5578	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.1399	NA	NA	0.577558	0.374489	NA	0.428	NA	5.9478086
1057	10	71010375	71010375	C	T	exonic	HKDC1	NA	synonymous SNV	HKDC1:NM_025130:exon12:c.C1803T:p.F601F	exonic	ENSG00000156510	NA	synonymous SNV	ENSG00000156510:ENST00000354624:exon12:c.C1803T:p.F601F,ENSG00000156510:ENST00000395086:exon12:c.C1803T:p.F601F	Score=494;Name=lod=136	NA	10q22.1	NA	NA	NA	NA	rs5030948	0.16	0.16	0.135	0.13758	0.2674	0.0794	0.1945	0.0136	0.1912	0.27	0.11	0.22	0.02	0.2097	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.435011	NA	NA	0.24186	0.051294	NA	0.167	NA	5.9477066
1057	5	178562967	178562967	G	A	exonic	ADAMTS2	NA	synonymous SNV	ADAMTS2:NM_014244:exon13:c.C2028T:p.D676D	exonic	ENSG00000087116	NA	synonymous SNV	ENSG00000087116:ENST00000251582:exon13:c.C2028T:p.D676D	Score=376;Name=lod=45	NA	5q35.3	NA	NA	NA	NA	rs1972715	0.2	0.2	0.2	0.196486	0.2594	0.0992	0.2291	0.2481	0.1391	0.25	0.09	0.23	0.23	0.2234	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.422984	1.422984	NA	0.236628	0.246482	NA	0.203	NA	5.9472386
1057	6	29895111	29895111	C	T	intergenic	HCG4B,HLA-A	dist=1683;dist=15136	NA	NA	ncRNA_exonic	ENSG00000230795	NA	NA	NA	NA	NA	6p22.1	NA	Name=c-Myc,HEY1,ELF1_(SC-631),TAF1,Pol2,YY1	Name=99	NA	rs9259830	0.05	0.05	0.05	0.0523163	0.0537	0.0486	0.0346	0.056	0.0624	0.06	0.06	0.04	0.05	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.746637	NA	NA	NA	NA	NA	0.022	NA	5.9463
1057	3	126268918	126268918	G	A	exonic	C3orf22	NA	synonymous SNV	C3orf22:NM_152533:exon4:c.C219T:p.L73L	exonic	ENSG00000180697	NA	synonymous SNV	ENSG00000180697:ENST00000318225:exon4:c.C219T:p.L73L	NA	NA	3q21.3	NA	Name=CTCF	NA	NA	rs869463	0.21	0.21	0.176	0.174321	0.2485	0.255	0.2695	0.0356	0.135	0.26	0.26	0.27	0.03	0.2329	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.518302	NA	NA	0.23907	0.080572	NA	0.239	NA	5.9461966
1057	11	18108492	18108492	T	C	exonic	SAAL1	NA	synonymous SNV	SAAL1:NM_138421:exon9:c.A963G:p.T321T	exonic	ENSG00000166788	NA	synonymous SNV	ENSG00000166788:ENST00000531751:exon6:c.A630G:p.T210T,ENSG00000166788:ENST00000300013:exon9:c.A963G:p.T321T,ENSG00000166788:ENST00000524803:exon9:c.A963G:p.T321T,ENSG00000166788:ENST00000529318:exon9:c.A963G:p.T321T,ENSG00000166788:ENST00000531581:exon9:c.A963G:p.T321T	Score=516;Name=lod=166	NA	11p15.1	NA	NA	NA	NA	rs12363226	0.14	0.14	0.126	0.14357	0.2604	0.1349	0.1556	0.0182	0.1933	0.24	0.09	0.19	0.02	0.2092	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.253591	1.253591	NA	0.251106	0.053182	NA	0.188	NA	5.9459606
1057	7	37890316	37890316	C	T	exonic	NME8	NA	synonymous SNV	NME8:NM_016616:exon5:c.C177T:p.D59D	exonic	ENSG00000086288	NA	synonymous SNV	ENSG00000086288:ENST00000440017:exon4:c.C177T:p.D59D,ENSG00000086288:ENST00000199447:exon5:c.C177T:p.D59D	Score=321;Name=lod=27	NA	7p14.1	NA	NA	NA	NA	rs2598044	0.27	0.27	0.283	0.245208	0.2475	0.1815	0.2161	0.4092	0.1074	0.24	0.21	0.22	0.45	0.2302	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.779293	NA	NA	0.243488	0.368134	ID=COSM1450587;OCCURENCE=1(large_intestine)	0.297	NA	5.9454786
1057	20	60509209	60509209	C	T	exonic	CDH4	NA	synonymous SNV	CDH4:NM_001252338:exon14:c.C2364T:p.G788G,CDH4:NM_001252339:exon14:c.C2253T:p.G751G,CDH4:NM_001794:exon15:c.C2475T:p.G825G	exonic	ENSG00000179242	NA	synonymous SNV	ENSG00000179242:ENST00000543233:exon14:c.C2253T:p.G751G,ENSG00000179242:ENST00000360469:exon15:c.C2475T:p.G825G	NA	NA	20q13.33	Score=709;Name=V$HOX13_01	NA	NA	NA	rs3753045	0.17	0.17	0.171	0.161342	0.2535	0.1498	0.1988	0.0287	0.2311	0.25	0.14	0.22	0.04	0.2179	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.167288	NA	NA	0.249884	0.064714	ID=COSM1412878;OCCURENCE=1(large_intestine)	0.145	NA	5.9453826
1057	6	29894569	29894569	T	C	intergenic	HCG4B,HLA-A	dist=1141;dist=15678	NA	NA	ncRNA_exonic	ENSG00000227262,ENSG00000230795	NA	NA	NA	NA	NA	6p22.1	NA	Name=Pol2-4H8,NFKB,AP-2gamma	Name=99	NA	rs9259824	0.05	0.05	0.058	0.0529153	0.0547	0.0506	0.0346	0.0567	0.0613	0.06	0.06	0.04	0.05	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.070174	NA	NA	NA	NA	NA	0.014	NA	5.9453
1057	6	29895228	29895228	G	T	intergenic	HCG4B,HLA-A	dist=1800;dist=15019	NA	NA	ncRNA_exonic	ENSG00000230795	NA	NA	NA	Score=243;Name=lod=13	NA	6p22.1	NA	Name=c-Myc,Pol2	NA	NA	rs9259831	0.05	0.05	0.06	0.0529153	0.0547	0.0506	0.0346	0.0567	0.0613	0.06	0.06	0.04	0.05	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.942061	NA	NA	NA	NA	NA	0.022	NA	5.9453
1057	4	39116911	39116911	T	C	exonic	KLHL5	NA	synonymous SNV	KLHL5:NM_199039:exon9:c.T1989C:p.T663T,KLHL5:NM_001171654:exon10:c.T1611C:p.T537T,KLHL5:NM_015990:exon10:c.T2172C:p.T724T,KLHL5:NM_001007075:exon11:c.T2034C:p.T678T	exonic	ENSG00000109790	NA	synonymous SNV	ENSG00000109790:ENST00000261426:exon9:c.T1989C:p.T663T,ENSG00000109790:ENST00000359687:exon10:c.T2172C:p.T724T,ENSG00000109790:ENST00000381930:exon10:c.T2172C:p.T724T,ENSG00000109790:ENST00000504108:exon10:c.T2172C:p.T724T,ENSG00000109790:ENST00000508137:exon10:c.T1611C:p.T537T,ENSG00000109790:ENST00000261425:exon11:c.T2034C:p.T678T	NA	NA	4p14	NA	NA	NA	NA	rs3733276	0.54	0.54	0.506	0.492612	0.5765	0.495	0.5965	0.3411	0.5348	0.59	0.52	0.63	0.41	0.5592	0.63	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.929	T	0.000	T	.	0.708	7.776	-3.44	-0.927	-0.788	0.633	0.708499	NA	NA	0.58593	0.391512	NA	0.529	NA	5.9450366
1058	3	78717343	78717343	C	T	exonic	ROBO1	NA	synonymous SNV	ROBO1:NM_001145845:exon12:c.G1632A:p.S544S,ROBO1:NM_133631:exon12:c.G1632A:p.S544S,ROBO1:NM_002941:exon13:c.G1740A:p.S580S	exonic	ENSG00000169855	NA	synonymous SNV	ENSG00000169855:ENST00000495961:exon3:c.G351A:p.S117S,ENSG00000169855:ENST00000436010:exon11:c.G1623A:p.S541S,ENSG00000169855:ENST00000467549:exon12:c.G1632A:p.S544S,ENSG00000169855:ENST00000495273:exon12:c.G1632A:p.S544S,ENSG00000169855:ENST00000464233:exon13:c.G1740A:p.S580S	Score=536;Name=lod=201	NA	3p12.3	NA	NA	NA	NA	rs2271151	0.29	0.29	0.328	0.282548	0.2485	0.2192	0.2435	0.4297	0.2117	0.26	0.24	0.24	0.42	0.2342	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.02299	NA	NA	0.239024	0.369048	NA	0.29	NA	5.9449426
1058	11	108384207	108384207	C	T	exonic	EXPH5	NA	nonsynonymous SNV	EXPH5:NM_015065:exon6:c.G2027A:p.S676N	exonic	ENSG00000110723	NA	nonsynonymous SNV	ENSG00000110723:ENST00000443411:exon3:c.G1463A:p.S488N,ENSG00000110723:ENST00000533052:exon3:c.G1463A:p.S488N,ENSG00000110723:ENST00000265843:exon6:c.G2027A:p.S676N,ENSG00000110723:ENST00000428840:exon6:c.G1799A:p.S600N,ENSG00000110723:ENST00000526312:exon6:c.G1799A:p.S600N,ENSG00000110723:ENST00000525344:exon7:c.G2006A:p.S669N	NA	NA	11q22.3	NA	NA	NA	NA	rs2846412	0.62	0.62	0.623	0.641174	0.4384	0.8542	0.5533	0.6982	0.6155	0.44	0.88	0.49	0.68	0.5286	0.88	1	T	0.0	B	0.0	B	0.213	N	1.000	P	-1.155	N	4.38	T	-1.021	T	0.000	T	0.033	-2.112	0.006	1.14	-0.041	0.673	9.569	-2.111572	NA	0.86	0.42194	0.657201	NA	0.442	NA	5.9443934
1058	5	6607135	6607135	C	T	intronic	NSUN2	NA	NA	NA	intronic	ENSG00000037474	NA	NA	NA	NA	NA	5p15.31	NA	Name=Max,c-Myc	Name=4	NA	rs114937174	NA	NA	0.062	0.0634984	0.0557	0.1954	0.0403	0.0045	0.0317	NA	NA	NA	NA	NA	0.054	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.855369	NA	NA	NA	NA	NA	0.036	NA	5.9443
1058	11	12785718	12785718	T	C	intronic	TEAD1	NA	NA	NA	intronic	ENSG00000187079	NA	NA	NA	Score=700;Name=lod=936	NA	11p15.2	NA	NA	Name=2	NA	rs72858140	0.03	0.03	0.015	0.0179712	0.0557	0.001	0.0245	0.0015	0.0143	0.06	NA	0.03	0.002	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.552607	2.552607	NA	NA	NA	NA	0.087	NA	5.9443
1058	9	27205021	27205021	G	A	exonic	TEK	NA	synonymous SNV	TEK:NM_000459:exon14:c.G2322A:p.R774R	exonic	ENSG00000120156	NA	synonymous SNV	ENSG00000120156:ENST00000519097:exon12:c.G1881A:p.R627R,ENSG00000120156:ENST00000406359:exon13:c.G2193A:p.R731R,ENSG00000120156:ENST00000380036:exon14:c.G2322A:p.R774R	Score=545;Name=lod=219	NA	9p21.2	NA	NA	NA	NA	rs542913	0.17	0.17	0.154	0.150958	0.2525	0.122	0.1599	0.0764	0.1708	0.25	0.12	0.2	0.09	0.2114	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.168705	NA	NA	0.258488	0.119156	NA	0.181	NA	5.9442786
1058	16	786444	786444	T	G	intronic	NARFL	NA	NA	NA	intronic	ENSG00000103245	NA	NA	NA	NA	NA	16p13.3	NA	Name=YY1_(C-20),YY1	Name=6	NA	rs57510736	0.02	0.02	0.016	0.0327476	0.0129	NA	0.0115	0.0408	0.091	0.01	NA	0.02	0.07	0.0251	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.486242	NA	NA	0.018144	0.038654	NA	0.022	NA	5.943856
1058	1	32687777	32687777	A	G	intronic	TMEM234	NA	NA	NA	intronic	ENSG00000084623,ENSG00000160055	NA	NA	NA	NA	NA	1p35.1	NA	Name=ZBTB7A_(SC-34508),BAF155,Sin3Ak-20,Egr-1,PU.1	Name=148	NA	rs17523023	0.16	0.16	0.121	0.208067	0.0567	0.2302	0.2305	0.236	0.2873	0.06	0.22	0.14	0.25	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.031202	NA	NA	NA	NA	NA	0.174	NA	5.9433
1058	3	149182668	149182668	A	C	intergenic	TM4SF1,TM4SF4	dist=87100;dist=9700	NA	NA	ncRNA_exonic	ENSG00000239408	NA	NA	NA	NA	NA	3q25.1	NA	Name=PU.1	Name=4	NA	rs59595447	0.05	0.05	0.051	0.048722	0.0567	0.0685	0.0591	0.0121	0.0624	0.07	0.08	0.04	0.01	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.566344	1.566344	NA	NA	NA	NA	0.094	NA	5.9433
1058	3	36422216	36422216	T	C	exonic	STAC	NA	synonymous SNV	STAC:NM_003149:exon1:c.T81C:p.S27S	exonic	ENSG00000144681	NA	synonymous SNV	ENSG00000144681:ENST00000273183:exon1:c.T81C:p.S27S,ENSG00000144681:ENST00000427486:exon1:c.T81C:p.S27S,ENSG00000144681:ENST00000434649:exon1:c.T81C:p.S27S,ENSG00000144681:ENST00000457375:exon1:c.T81C:p.S27S	Score=593;Name=lod=344	NA	3p22.3	NA	NA	NA	NA	rs73052248	0.2	0.2	0.189	0.173123	0.2475	0.1994	0.2579	0.031	0.2014	0.26	0.23	0.25	0.04	0.2458	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.134849	2.134849	NA	0.230124	0.060537	ID=COSM299849;OCCURENCE=1(large_intestine)	0.152	NA	5.9432426
1058	12	52863621	52863621	T	G	exonic	KRT6C	NA	synonymous SNV	KRT6C:NM_173086:exon7:c.A1257C:p.A419A	exonic	ENSG00000170465	NA	synonymous SNV	ENSG00000170465:ENST00000252250:exon7:c.A1257C:p.A419A	Score=401;Name=lod=57	NA	12q13.13	Score=756;Name=V$ROAZ_01	NA	NA	NA	rs382367	0.52	0.52	0.484	0.486022	0.6074	0.6369	0.611	0.2617	0.4202	0.55	0.7	0.6	0.23	0.5413	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.652469	NA	NA	0.575017	0.289151	NA	0.623	NA	5.9429496
1058	19	43922061	43922061	A	G	exonic	TEX101	NA	synonymous SNV	TEX101:NM_001130011:exon5:c.A423G:p.P141P,TEX101:NM_031451:exon8:c.A477G:p.P159P	exonic	ENSG00000131126	NA	synonymous SNV	ENSG00000131126:ENST00000253435:exon5:c.A477G:p.P159P,ENSG00000131126:ENST00000598265:exon5:c.A423G:p.P141P,ENSG00000131126:ENST00000602198:exon7:c.A477G:p.P159P	Score=355;Name=lod=37	NA	19q13.31	NA	NA	NA	NA	rs3816438	0.28	0.28	0.253	0.28754	0.2366	0.6091	0.2839	0.0287	0.3609	0.23	0.56	0.25	0.03	0.2591	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.602295	NA	NA	0.228372	0.05833	NA	0.196	NA	5.9425946
1058	3	149182576	149182576	T	G	intergenic	TM4SF1,TM4SF4	dist=87008;dist=9792	NA	NA	ncRNA_exonic	ENSG00000241929	NA	NA	NA	Score=483;Name=lod=122	NA	3q25.1	NA	Name=GATA3_(SC-268)	NA	NA	rs368116905	NA	NA	NA	0.0489217	0.0577	0.0685	0.0591	0.0121	0.0624	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.360513	1.360513	NA	NA	NA	NA	NA	NA	5.9423
1058	3	186507757	186507757	G	A	UTR3	RFC4	NM_002916:c.*1C>T,NM_181573:c.*1C>T	NA	NA	UTR3	ENSG00000163918	ENST00000433496:c.*1C>T,ENST00000392481:c.*1C>T,ENST00000296273:c.*1C>T,ENST00000417876:c.*78C>T	NA	NA	NA	NA	3q27.3	NA	Name=HEY1,CCNT2,Pol2-4H8,TAF7_(SQ-8),Sin3Ak-20,Pol2(phosphoS2),Pol2	Name=139	NA	rs1047148	0.09	0.09	0.083	0.0928514	0.1312	0.1429	0.0677	0.0076	0.135	0.13	0.12	0.08	0.01	0.1236	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.996224	NA	NA	0.136395	0.03064	NA	0.109	NA	5.9421384
1058	16	23360199	23360199	T	C	exonic	SCNN1B	NA	synonymous SNV	SCNN1B:NM_000336:exon2:c.T279C:p.P93P	exonic	ENSG00000168447	NA	synonymous SNV	ENSG00000168447:ENST00000564275:exon1:c.T279C:p.P93P,ENSG00000168447:ENST00000568085:exon1:c.T279C:p.P93P,ENSG00000168447:ENST00000568923:exon1:c.T279C:p.P93P,ENSG00000168447:ENST00000343070:exon2:c.T279C:p.P93P,ENSG00000168447:ENST00000307331:exon3:c.T414C:p.P138P	NA	NA	16p12.2	NA	Name=Rad21,CTCF,RXRA,CTCF_(SC-5916)	Name=9	NA	rs238547	0.74	0.74	0.764	0.788538	0.5408	0.9831	0.4582	0.969	0.8333	0.53	0.98	0.49	0.97	0.6355	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.099855	NA	NA	0.548488	0.885071	NA	0.659	NA	5.9418786
1058	10	30998371	30998371	T	C	intergenic	LYZL2,ZNF438	dist=79724;dist=135194	NA	NA	ncRNA_exonic	ENSG00000234814	NA	NA	NA	NA	NA	10p11.23	NA	Name=CTCF_(SC-5916),CTCF	Name=4	NA	rs12258064	0.07	0.07	0.055	0.0820687	0.0209	0.0347	0.0476	0.2163	0.0368	0.02	0.03	0.05	0.19	0.0374	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.897632	NA	NA	NA	NA	NA	0.116	NA	5.9417
1058	16	24046655	24046655	G	T	intronic	PRKCB	NA	NA	NA	intronic	ENSG00000166501	NA	NA	NA	NA	NA	16p12.2	Score=862;Name=V$ELK1_01	NA	Name=4	NA	rs11643225	0.04	0.04	0.038	0.0365415	0.0586	0.0129	0.0403	0.0363	0.0358	0.06	0.02	0.04	0.04	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.020563	NA	NA	NA	NA	NA	0.036	NA	5.9414
1058	18	34182834	34182834	G	A	intronic	FHOD3	NA	NA	NA	intronic	ENSG00000134775	NA	NA	NA	NA	NA	18q12.2	NA	Name=CEBPB	Name=8	NA	rs9953875	0.09	0.09	0.09	0.0930511	0.0586	0.0962	0.0519	0.1475	0.0808	0.06	0.09	0.06	0.16	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.787149	NA	NA	NA	NA	NA	0.123	NA	5.9414
1058	11	59211421	59211421	C	T	exonic	OR5A1	NA	synonymous SNV	OR5A1:NM_001004728:exon1:c.C780T:p.F260F	exonic	ENSG00000172320	NA	synonymous SNV	ENSG00000172320:ENST00000302030:exon1:c.C780T:p.F260F	Score=435;Name=lod=78	NA	11q12.1	NA	NA	NA	NA	rs17591107	0.16	0.16	0.15	0.125799	0.2525	0.1111	0.1326	0.0242	0.1431	0.27	0.12	0.16	0.04	0.2093	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.672634	NA	NA	0.263562	0.05702	ID=COSM1178423;OCCURENCE=1(prostate)	0.094	NA	5.9413046
1058	19	8176569	8176569	G	A	exonic	FBN3	NA	synonymous SNV	FBN3:NM_032447:exon31:c.C4047T:p.C1349C	exonic	ENSG00000142449	NA	synonymous SNV	ENSG00000142449:ENST00000270509:exon31:c.C4047T:p.C1349C,ENSG00000142449:ENST00000600128:exon32:c.C4047T:p.C1349C,ENSG00000142449:ENST00000601739:exon32:c.C4047T:p.C1349C	Score=450;Name=lod=90	NA	19p13.2	NA	NA	NA	NA	rs35306870	0.29	0.29	0.271	0.256989	0.2346	0.4226	0.3876	0.1331	0.184	0.24	0.44	0.35	0.16	0.2492	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.864114	NA	NA	0.241628	0.171357	ID=COSM1397730;OCCURENCE=1(large_intestine)	0.21	NA	5.9412386
1058	3	78700901	78700901	G	T	exonic	ROBO1	NA	synonymous SNV	ROBO1:NM_001145845:exon18:c.C2685A:p.T895T,ROBO1:NM_133631:exon18:c.C2685A:p.T895T,ROBO1:NM_002941:exon19:c.C2793A:p.T931T	exonic	ENSG00000169855	NA	synonymous SNV	ENSG00000169855:ENST00000436010:exon17:c.C2676A:p.T892T,ENSG00000169855:ENST00000467549:exon18:c.C2685A:p.T895T,ENSG00000169855:ENST00000495273:exon18:c.C2685A:p.T895T,ENSG00000169855:ENST00000464233:exon19:c.C2793A:p.T931T	Score=366;Name=lod=41	NA	3p12.3	NA	NA	NA	NA	rs6795556	0.23	0.23	0.252	0.216653	0.2594	0.2222	0.2161	0.1657	0.2362	0.26	0.24	0.19	0.19	0.2246	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.253122	NA	NA	0.241959	0.169638	NA	0.196	NA	5.9407076
1058	19	46815373	46815373	C	T	intronic	HIF3A	NA	NA	NA	intronic	ENSG00000124440	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs36063219	0.01	0.01	0.011	0.00738818	0.0268	NA	0.0086	NA	0.0041	0.02	NA	0.01	NA	0.0149	0.02	0	D	.	.	.	.	.	.	1.000	N	.	.	.	.	-1.004	T	0.056	T	.	-0.007	3.978	1.01	0.448	0.430	5.036	-0.006962	NA	NA	0.017791	0.002497	NA	NA	NA	5.940509
1058	11	15096436	15096436	T	C	intronic	CALCB	NA	NA	NA	intronic	ENSG00000175868	NA	NA	NA	NA	NA	11p15.2	NA	Name=CTCF,ELF1_(SC-631),TCF4,KAP1,HA-E2F1	Name=137	NA	rs75461927	0.03	0.03	0.025	0.023762	0.0596	NA	0.0216	0.0023	0.0419	0.06	NA	0.03	0.0041	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.506624	1.506624	NA	NA	NA	NA	0.014	NA	5.9404
1058	4	167656073	167656073	C	T	exonic	SPOCK3	NA	synonymous SNV	SPOCK3:NM_001251967:exon8:c.G1016A:p.X339X,SPOCK3:NM_001204355:exon9:c.G1022A:p.X341X,SPOCK3:NM_001204353:exon10:c.G950A:p.X317X,SPOCK3:NM_001204354:exon10:c.G1034A:p.X345X,SPOCK3:NM_001204356:exon10:c.G1181A:p.X394X,SPOCK3:NM_001040159:exon11:c.G1301A:p.X434X,SPOCK3:NM_001204352:exon12:c.G1157A:p.X386X,SPOCK3:NM_016950:exon12:c.G1310A:p.X437X	exonic	ENSG00000196104	NA	synonymous SNV	ENSG00000196104:ENST00000541637:exon7:c.G1016A:p.X339X,ENSG00000196104:ENST00000512681:exon8:c.G1016A:p.X339X,ENSG00000196104:ENST00000534949:exon8:c.G1022A:p.X341X,ENSG00000196104:ENST00000535728:exon9:c.G914A:p.X305X,ENSG00000196104:ENST00000510741:exon10:c.G1181A:p.X394X,ENSG00000196104:ENST00000511269:exon10:c.G1301A:p.X434X,ENSG00000196104:ENST00000541354:exon10:c.G950A:p.X317X,ENSG00000196104:ENST00000357545:exon11:c.G1301A:p.X434X,ENSG00000196104:ENST00000504953:exon11:c.G1301A:p.X434X,ENSG00000196104:ENST00000357154:exon12:c.G1310A:p.X437X,ENSG00000196104:ENST00000421836:exon12:c.G1157A:p.X386X,ENSG00000196104:ENST00000502330:exon12:c.G1310A:p.X437X,ENSG00000196104:ENST00000506886:exon12:c.G1310A:p.X437X,ENSG00000196104:ENST00000511531:exon12:c.G1310A:p.X437X	Score=637;Name=lod=518	NA	4q32.3	NA	NA	NA	NA	rs1057377	0.12	0.12	0.115	0.128994	0.2565	0.001	0.1167	0.0113	0.2975	0.25	NA	0.15	0.02	0.2038	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.356121	NA	NA	0.266279	0.040626	NA	0.072	NA	5.9400876
1058	2	73829372	73829372	C	T	exonic	ALMS1	NA	synonymous SNV	ALMS1:NM_015120:exon20:c.C12172T:p.L4058L	exonic	ENSG00000116127	NA	synonymous SNV	ENSG00000116127:ENST00000409009:exon19:c.C12046T:p.L4016L,ENSG00000116127:ENST00000264448:exon20:c.C12172T:p.L4058L	Score=556;Name=lod=242	NA	2p13.1	NA	NA	NA	NA	rs1052162	0.32	0.32	0.351	0.341653	0.2276	0.0089	0.3804	0.8011	0.1534	0.24	0.01	0.33	0.81	0.2636	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.171612	NA	NA	0.235698	0.70177	NA	0.399	NA	5.9397686
1058	1	22214127	22214127	A	G	exonic	HSPG2	NA	synonymous SNV	HSPG2:NM_005529:exon8:c.T744C:p.L248L	exonic	ENSG00000142798	NA	nonsynonymous SNV	ENSG00000142798:ENST00000412328:exon5:c.T512C:p.L171S	NA	NA	1p36.12	NA	NA	NA	NA	rs2229478	0.52	0.52	0.487	0.536342	0.3191	0.6498	0.5793	0.7065	0.3824	0.34	0.65	0.55	0.64	0.4175	0.65	0.54	T	0.001	B	0.001	B	0.682	N	1.000	P	.	.	0.45	T	-0.946	T	0.000	T	.	1.311	10.3	0.117	-0.307	-0.260	0.623	1.311032	1.311032	0	0.323721	0.629596	NA	0.514	NA	5.939679
1058	5	140890770	140890770	G	A	UTR3	PCDHGA1,PCDHGA10,PCDHGA11,PCDHGA12,PCDHGA2,PCDHGA3,PCDHGA4,PCDHGA5,PCDHGA6,PCDHGA7,PCDHGA8,PCDHGA9,PCDHGB1,PCDHGB2,PCDHGB3,PCDHGB4,PCDHGB5,PCDHGB6,PCDHGB7,PCDHGC3,PCDHGC4,PCDHGC5	NM_018912:c.*30G>A;NM_018913:c.*30G>A;NM_032092:c.*30G>A,NM_018914:c.*30G>A;NM_003735:c.*30G>A;NM_018915:c.*30G>A;NM_018916:c.*30G>A;NM_018917:c.*30G>A;NM_018918:c.*30G>A;NM_018919:c.*30G>A;NM_018920:c.*30G>A;NM_032088:c.*30G>A;NM_018921:c.*30G>A;NM_018922:c.*30G>A;NM_018923:c.*30G>A;NM_018924:c.*30G>A;NM_003736:c.*30G>A;NM_018925:c.*30G>A;NM_018926:c.*30G>A;NM_018927:c.*30G>A;NM_002588:c.*30G>A,NM_032403:c.*30G>A;NM_018928:c.*30G>A;NM_018929:c.*30G>A	NA	NA	UTR3	ENSG00000081853,ENSG00000204956,ENSG00000240184,ENSG00000240764,ENSG00000242419,ENSG00000253159,ENSG00000253305,ENSG00000253485,ENSG00000253537,ENSG00000253731,ENSG00000253767,ENSG00000253846,ENSG00000253873,ENSG00000253910,ENSG00000253953,ENSG00000254122,ENSG00000254221,ENSG00000254245,ENSG00000261934,ENSG00000262209,ENSG00000262576	ENST00000394576:c.*30G>A;ENST00000517417:c.*30G>A;ENST00000308177:c.*30G>A;ENST00000252087:c.*30G>A;ENST00000306593:c.*30G>A;ENST00000252085:c.*30G>A;ENST00000520790:c.*30G>A;ENST00000518069:c.*30G>A;ENST00000518325:c.*30G>A;ENST00000517434:c.*30G>A;ENST00000398604:c.*30G>A;ENST00000398610:c.*30G>A;ENST00000398587:c.*30G>A;ENST00000522605:c.*30G>A;ENST00000519479:c.*30G>A;ENST00000398594:c.*30G>A;ENST00000523390:c.*30G>A;ENST00000253812:c.*30G>A;ENST00000573521:c.*30G>A;ENST00000576222:c.*30G>A;ENST00000571252:c.*30G>A	NA	NA	Score=567;Name=lod=269	NA	5q31.3	NA	Name=ELF1_(SC-631),Pol2-4H8,Pol2	NA	NA	rs2233613	0.12	0.12	0.123	0.129393	0.1143	0.1062	0.1787	0.121	0.1452	0.13	0.12	0.16	0.08	0.1481	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.064855	NA	NA	0.131285	0.125798	NA	0.159	NA	5.9396484
1058	7	76111835	76111835	G	A	exonic	DTX2	NA	synonymous SNV	DTX2:NM_001102596:exon2:c.G279A:p.R93R,DTX2:NM_001102595:exon3:c.G279A:p.R93R,DTX2:NM_001102594:exon4:c.G279A:p.R93R,DTX2:NM_020892:exon5:c.G279A:p.R93R	exonic	ENSG00000091073	NA	synonymous SNV	ENSG00000091073:ENST00000446820:exon2:c.G279A:p.R93R,ENSG00000091073:ENST00000413936:exon3:c.G279A:p.R93R,ENSG00000091073:ENST00000446600:exon3:c.G6A:p.R2R,ENSG00000091073:ENST00000429179:exon4:c.G279A:p.R93R,ENSG00000091073:ENST00000430490:exon4:c.G279A:p.R93R,ENSG00000091073:ENST00000307569:exon5:c.G279A:p.R93R,ENSG00000091073:ENST00000324432:exon5:c.G279A:p.R93R,ENSG00000091073:ENST00000423646:exon5:c.G279A:p.R93R	NA	NA	7q11.23	Score=835;Name=V$GRE_C	NA	NA	NA	rs4236506	0.22	0.22	0.213	0.225639	0.2495	0.2302	0.2767	0.1256	0.2955	0.25	0.22	0.27	0.14	0.2463	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.879087	NA	NA	0.231279	0.145256	ID=COSM1452117;OCCURENCE=2(large_intestine)	0.08	NA	5.9395876
1058	7	142119831	142119831	G	A	intergenic	LOC730441,MTRNR2L6	dist=147763;dist=254300	NA	NA	exonic	ENSG00000253291	NA	synonymous SNV	ENSG00000253291:ENST00000390377:exon2:c.C336T:p.A112A	Score=304;Name=lod=23	NA	7q34	Score=777;Name=V$MIF1_01	NA	Name=10	NA	rs361390	0.51	0.51	0.568	0.490016	0.5199	0.7639	0.4813	0.1815	0.6002	0.53	0.76	0.45	0.22	0.5151	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.577595	NA	NA	0.526222	0.230221	NA	0.457	NA	5.938778
1058	16	30393660	30393660	G	A	exonic	SEPT1	NA	synonymous SNV	SEPT1:NM_052838:exon3:c.C171T:p.A57A	exonic	ENSG00000180096,ENSG00000270466	NA	nonsynonymous SNV	ENSG00000180096:ENST00000568577:exon2:c.C97T:p.P33S	Score=519;Name=lod=171	NA	16p11.2	Score=682;Name=V$PPARG_02	NA	NA	NA	rs4787643	0.78	0.78	0.757	0.773163	0.673	0.9127	0.7767	0.7693	0.7352	0.69	0.91	0.78	0.75	0.7138	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.46307	1.46307	NA	0.674651	0.7533	NA	0.703	NA	5.938549
1058	19	11319491	11319491	G	A	exonic	DOCK6	NA	synonymous SNV	DOCK6:NM_020812:exon39:c.C4959T:p.N1653N	exonic	ENSG00000130158	NA	synonymous SNV	ENSG00000130158:ENST00000319867:exon25:c.C2976T:p.N992N,ENSG00000130158:ENST00000294618:exon39:c.C4959T:p.N1653N	Score=479;Name=lod=118	NA	19p13.2	Score=876;Name=V$MYCMAX_02	NA	NA	NA	rs8409	0.48	0.48	0.476	0.441693	0.6044	0.4633	0.4741	0.264	0.4693	0.6	0.47	0.52	0.27	0.5387	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.77838	NA	NA	0.585031	0.300328	NA	0.58	NA	5.9385356
1058	19	52192669	52192669	G	T	intergenic	SIGLEC14,MIR99B	dist=42537;dist=3196	NA	NA	ncRNA_intronic	ENSG00000269959	NA	NA	NA	NA	NA	19q13.41	NA	Name=Pol2,ZBTB7A_(SC-34508)	Name=4	NA	rs78241354	0.07	0.07	0.054	0.0708866	0.0616	0.0833	0.0447	0.0477	0.1176	0.06	0.09	0.06	0.07	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.50811	NA	NA	NA	NA	NA	0.007	NA	5.9384
1058	2	201736112	201736112	T	C	UTR3	PPIL3	NM_130906:c.*6A>G,NM_032472:c.*6A>G	NA	NA	UTR3	ENSG00000240344	ENST00000286175:c.*6A>G,ENST00000392283:c.*6A>G,ENST00000415562:c.*277A>G,ENST00000409264:c.*6A>G,ENST00000409361:c.*6A>G,ENST00000409449:c.*6A>G	NA	NA	NA	NA	2q33.1	NA	Name=CEBPB,JunD	Name=26	NA	rs11892119	0.17	0.17	0.181	0.175919	0.1441	0.0139	0.1268	0.4516	0.0378	0.15	0.0035	0.12	0.41	0.123	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.696837	2.696837	NA	0.127907	0.37222	NA	0.196	NA	5.9383264
1058	11	117077034	117077034	A	G	exonic	PCSK7	NA	synonymous SNV	PCSK7:NM_004716:exon17:c.T2037C:p.T679T	exonic	ENSG00000160613	NA	synonymous SNV	ENSG00000160613:ENST00000320934:exon17:c.T2037C:p.T679T	NA	NA	11q23.3	NA	NA	Name=5	NA	rs28590104	0.48	0.48	0.458	0.5623	0.3091	0.6538	0.4308	0.6989	0.637	0.3	0.64	0.35	0.67	0.4193	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.091596	NA	NA	NA	NA	NA	0.377	NA	5.9382666
1058	12	124181049	124181049	C	T	intronic	TCTN2	NA	NA	NA	intronic	ENSG00000168778	NA	NA	NA	NA	NA	12q24.31	NA	Name=GATA3_(SC-268)	Name=10	NA	rs7298440	0.27	0.27	0.263	0.272364	0.3588	0.0565	0.2291	0.3979	0.2669	0.36	0.05	0.25	0.39	0.3255	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.2449	NA	NA	0.377442	0.4133	NA	0.217	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000114227.2;CLNDSDB=.;CLNDSDBID=.	5.938258
1058	19	51483620	51483620	G	C	exonic	KLK7	NA	synonymous SNV	KLK7:NM_001207053:exon3:c.C129G:p.L43L,KLK7:NM_001243126:exon3:c.C324G:p.L108L,KLK7:NM_005046:exon4:c.C345G:p.L115L,KLK7:NM_139277:exon4:c.C345G:p.L115L	exonic	ENSG00000169035	NA	nonsynonymous SNV	ENSG00000169035:ENST00000304045:exon3:c.C197G:p.S66W	NA	NA	19q13.41	NA	NA	NA	NA	rs35354640	0.01	0.01	0.01	0.00898562	0.0258	NA	0.0187	0.0008	0.0051	0.03	NA	0.02	0.002	0.0152	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.683853	NA	NA	0.021047	0.003177	NA	0.007	NA	5.937953
1058	5	149495253	149495253	T	C	UTR3	PDGFRB	NM_002609:c.*73A>G	NA	NA	UTR3	ENSG00000113721	ENST00000261799:c.*73A>G	NA	NA	NA	NA	5q32	NA	Name=GATA-1,ETS1,GABP,TAL1_(SC-12984),HMGN3,Pol2,NRSF,Pol2-4H8,GATA-2,ELF1_(SC-631),ZBTB7A_(SC-34508),CCNT2,THAP1_(SC-98174),USF-1,GATA2_(CG2-96)	Name=8	NA	rs2229562	0.31	0.31	0.311	0.31889	0.3956	0.1071	0.3285	0.4259	0.3067	0.4	0.1	0.35	0.39	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.092625	NA	NA	NA	NA	NA	0.319	NA	5.9377334
1058	9	139369062	139369062	C	T	exonic	SEC16A	NA	synonymous SNV	SEC16A:NM_001276418:exon2:c.G3006A:p.L1002L,SEC16A:NM_014866:exon3:c.G3006A:p.L1002L	exonic	ENSG00000148396	NA	synonymous SNV	ENSG00000148396:ENST00000290037:exon1:c.G2472A:p.L824L,ENSG00000148396:ENST00000313050:exon1:c.G3006A:p.L1002L,ENSG00000148396:ENST00000371706:exon1:c.G2472A:p.L824L,ENSG00000148396:ENST00000431893:exon1:c.G2472A:p.L824L	NA	NA	9q34.3	Score=938;Name=V$NFAT_Q6	NA	NA	NA	rs3812595	0.17	0.17	0.164	0.152157	0.2535	0.0575	0.2608	0.1021	0.136	0.26	0.08	0.24	0.09	0.2144	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.001595	NA	NA	0.261284	0.118701	NA	0.13	NA	5.9374826
1058	9	79655474	79655474	A	G	intergenic	FOXB2,VPS13A-AS1	dist=19605;dist=136198	NA	NA	ncRNA_exonic	ENSG00000232851	NA	NA	NA	NA	NA	9q21.2	NA	Name=NRSF	Name=4	NA	rs72736983	0.05	0.05	0.055	0.0535144	0.0626	0.0079	0.0634	0.0575	0.0787	0.07	0.01	0.06	0.08	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.008707	NA	NA	NA	NA	NA	0.036	NA	5.9374
1058	9	140652537	140652537	G	T	intronic	EHMT1	NA	NA	NA	intronic	ENSG00000181090	NA	NA	NA	NA	NA	9q34.3	NA	Name=Pol2-4H8,CTCF	Name=92	NA	rs3125795	0.12	0.12	0.146	0.144369	0.0626	0.001	0.085	0.4501	0.0051	0.06	0.0017	0.08	0.4	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.463412	NA	NA	NA	NA	NA	0.181	NA	5.9374
1058	9	140652571	140652571	C	G	intronic	EHMT1	NA	NA	NA	intronic	ENSG00000181090	NA	NA	NA	NA	NA	9q34.3	NA	Name=CTCF	Name=92	NA	rs3123518	0.11	0.11	0.12	0.123003	0.0626	NA	0.0749	0.3752	0.0051	0.06	NA	0.07	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.59475	NA	NA	NA	NA	NA	0.123	NA	5.9374
1058	3	180365956	180365956	G	A	exonic	CCDC39	NA	synonymous SNV	CCDC39:NM_181426:exon10:c.C1359T:p.S453S	exonic	ENSG00000145075	NA	synonymous SNV	ENSG00000145075:ENST00000442201:exon10:c.C1359T:p.S453S,ENSG00000145075:ENST00000273654:exon16:c.C1611T:p.S537S,ENSG00000145075:ENST00000476379:exon16:c.C1359T:p.S453S	Score=538;Name=lod=204	NA	3q26.33	NA	NA	NA	NA	rs6769457	0.31	0.31	0.313	0.31889	0.2515	0.004	0.2911	0.7375	0.1667	0.25	0.0017	0.31	0.74	0.2579	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.489663	NA	NA	0.219932	0.626477	NA	0.377	NA	5.9373346
1058	4	110866442	110866442	G	A	intronic	EGF	NA	NA	NA	intronic	ENSG00000138798	NA	NA	NA	NA	NA	4q25	Score=880;Name=V$AP1_01	Name=eGFP-JunD,c-Jun,eGFP-JunB,FOSL2,JunD,CEBPB,eGFP-FOS,FOSL1_(SC-183)	Name=24	NA	rs4698756	0.42	0.42	0.382	0.435304	0.333	0.505	0.4726	0.4486	0.4243	0.34	0.51	0.46	0.42	0.3882	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.119343	NA	NA	0.341977	0.458012	NA	0.507	NA	5.936823
1058	13	60240961	60240961	C	T	exonic	DIAPH3	NA	synonymous SNV	DIAPH3:NM_001258367:exon26:c.G3201A:p.L1067L,DIAPH3:NM_001258368:exon26:c.G3129A:p.L1043L,DIAPH3:NM_001258366:exon27:c.G3306A:p.L1102L,DIAPH3:NM_001042517:exon28:c.G3339A:p.L1113L	exonic	ENSG00000139734	NA	synonymous SNV	ENSG00000139734:ENST00000400319:exon26:c.G3129A:p.L1043L,ENSG00000139734:ENST00000400320:exon26:c.G3201A:p.L1067L,ENSG00000139734:ENST00000377908:exon27:c.G3306A:p.L1102L,ENSG00000139734:ENST00000400324:exon28:c.G3339A:p.L1113L,ENSG00000139734:ENST00000400330:exon28:c.G3339A:p.L1113L	Score=588;Name=lod=327	NA	13q21.2	NA	NA	NA	NA	rs9538494	0.15	0.15	0.129	0.146965	0.2594	0.1071	0.2147	0.0242	0.1902	0.25	0.1	0.22	0.02	0.2041	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.565348	NA	NA	0.26644	0.064028	NA	0.138	NA	5.9367266
1058	6	29894567	29894567	G	A	intergenic	HCG4B,HLA-A	dist=1139;dist=15680	NA	NA	ncRNA_exonic	ENSG00000227262,ENSG00000230795	NA	NA	NA	NA	NA	6p22.1	NA	Name=AP-2gamma,NFKB,Pol2-4H8	Name=99	NA	rs116296604	0.1	0.1	0.052	0.121006	0.0636	0.3214	0.0476	0.003	0.1851	0.06	0.28	0.05	0.002	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.170859	NA	NA	NA	NA	NA	0.051	NA	5.9364
1058	6	29895005	29895005	C	T	intergenic	HCG4B,HLA-A	dist=1577;dist=15242	NA	NA	ncRNA_exonic	ENSG00000230795	NA	NA	NA	NA	NA	6p22.1	NA	Name=ELF1_(SC-631),TAF1,Pol2,YY1	Name=99	NA	rs62390376	0.1	0.1	0.039	0.119808	0.0636	0.3185	0.0476	0.0023	0.183	0.06	0.28	0.05	0.002	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.592533	NA	NA	NA	NA	NA	0.087	NA	5.9364
1058	6	29895039	29895039	A	C	intergenic	HCG4B,HLA-A	dist=1611;dist=15208	NA	NA	ncRNA_exonic	ENSG00000230795	NA	NA	NA	NA	NA	6p22.1	NA	Name=ELF1_(SC-631),HEY1,TAF1,YY1,Pol2	Name=99	NA	rs62390377	0.1	0.1	0.065	0.119808	0.0636	0.3185	0.0476	0.0023	0.183	0.06	0.28	0.05	0.002	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.332839	1.332839	NA	NA	NA	NA	0.087	NA	5.9364
1058	7	40899967	40899967	G	C	exonic	C7orf10	NA	synonymous SNV	C7orf10:NM_001193312:exon13:c.G1083C:p.P361P,C7orf10:NM_001193313:exon14:c.G1227C:p.P409P,C7orf10:NM_001193311:exon15:c.G1305C:p.P435P,C7orf10:NM_024728:exon15:c.G1194C:p.P398P	exonic	ENSG00000175600	NA	synonymous SNV	ENSG00000175600:ENST00000401647:exon13:c.G1083C:p.P361P,ENSG00000175600:ENST00000335693:exon14:c.G1227C:p.P409P,ENSG00000175600:ENST00000309930:exon15:c.G1305C:p.P435P	Score=449;Name=lod=89	NA	7p14.1	NA	NA	NA	NA	rs2010706	0.46	0.46	0.447	NA	NA	NA	NA	NA	NA	0.36	0.8	0.42	0.24	0.3887	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.088211	NA	NA	0.341576	0.215513	NA	0.406	NA	5.9363906
1058	12	96346594	96346594	T	C	exonic	AMDHD1	NA	synonymous SNV	AMDHD1:NM_152435:exon2:c.T237C:p.I79I	exonic	ENSG00000139344	NA	synonymous SNV	ENSG00000139344:ENST00000266736:exon2:c.T237C:p.I79I	Score=525;Name=lod=181	NA	12q23.1	NA	NA	NA	NA	rs1982138	0.24	0.24	0.23	0.254593	0.2455	0.4673	0.1225	0.0923	0.3579	0.25	0.42	0.14	0.1	0.2445	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.087858	NA	NA	0.241098	0.126645	NA	0.116	NA	5.9355686
1058	6	29894603	29894603	A	G	intergenic	HCG4B,HLA-A	dist=1175;dist=15644	NA	NA	ncRNA_exonic	ENSG00000227262,ENSG00000230795	NA	NA	NA	NA	NA	6p22.1	NA	Name=Pol2-4H8,NFKB,AP-2gamma	Name=99	NA	rs116078621	0.11	0.11	0.048	0.121206	0.0646	0.3204	0.0476	0.003	0.1861	0.07	0.29	0.05	0.01	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.361648	NA	NA	NA	NA	NA	0.058	NA	5.9354
1058	12	96368255	96368255	A	G	intronic	HAL	NA	NA	NA	intronic	ENSG00000084110	NA	NA	NA	NA	NA	12q23.1	NA	Name=USF-1,TCF12,HDAC2_(SC-6296),FOSL2,FOXA1_(C-20),HNF4A_(H-171),p300,RXRA,FOXA1_(SC-101058),FOXA2_(SC-6554),HNF4G_(SC-6558),SP1,TCF4	Name=3	NA	rs2068662	0.14	0.14	0.143	0.153954	0.0646	0.1012	0.062	0.3359	0.1196	0.06	0.1	0.07	0.34	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.217096	NA	NA	NA	NA	NA	0.21	NA	5.9354
1058	13	41437926	41437926	C	T	ncRNA_intronic	TPTE2P5	NA	NA	NA	ncRNA_exonic	ENSG00000176268	NA	NA	NA	Score=624;Name=lod=459	NA	13q14.11	NA	Name=Rad21	NA	NA	rs7339089	0.58	0.58	0.551	0.572284	0.7316	0.2302	0.7305	0.5991	0.6125	0.74	0.26	0.7	0.6	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.792315	NA	NA	NA	NA	NA	0.688	NA	5.9350666
1059	6	11779088	11779088	C	T	UTR5	ADTRP	NM_032744:c.-96G>A,NM_001143948:c.-96G>A	NA	NA	UTR5	ENSG00000111863	ENST00000414691:c.-96G>A,ENST00000379413:c.-96G>A,ENST00000379415:c.-96G>A,ENST00000506810:c.-96G>A	NA	NA	NA	NA	6p24.1	NA	Name=E2F6_(H-50),TBP,HEY1,ELF1_(SC-631)	Name=10	NA	rs2076189	0.35	0.35	0.339	0.349241	0.3986	0.2262	0.3963	0.4312	0.2812	0.39	0.22	0.36	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.412985	NA	NA	NA	NA	NA	0.435	NA	5.9347334
1059	18	21437931	21437931	G	C	exonic	LAMA3	NA	synonymous SNV	LAMA3:NM_001127717:exon33:c.G4260C:p.G1420G,LAMA3:NM_198129:exon33:c.G4260C:p.G1420G	exonic	ENSG00000053747	NA	synonymous SNV	ENSG00000053747:ENST00000313654:exon33:c.G4260C:p.G1420G,ENSG00000053747:ENST00000399516:exon33:c.G4260C:p.G1420G	NA	NA	18q11.2	NA	Name=CEBPB,FOXA2_(SC-6554),FOXA1_(SC-101058),STAT3,FOXA1_(C-20)	Name=76	NA	rs867449	0.39	0.39	0.354	0.34365	0.6123	0.1736	0.415	0.202	0.3834	0.61	0.17	0.47	0.22	0.4962	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.349559	NA	NA	0.623715	0.298724	NA	0.406	NA	5.9344516
1059	1	16890441	16890441	C	T	exonic	NBPF1	NA	unknown	UNKNOWN	exonic	ENSG00000219481	NA	synonymous SNV	ENSG00000219481:ENST00000430580:exon29:c.G3417A:p.Q1139Q	NA	NA	1p36.13	NA	NA	Name=9	NA	rs3863779	NA	NA	0.055	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2789	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.202919	NA	NA	0.120233	0.091466	NA	NA	NA	5.9342003
1059	16	4794873	4794873	C	T	exonic	C16orf71	NA	nonsynonymous SNV	C16orf71:NM_139170:exon6:c.C904T:p.R302C	exonic	ENSG00000166246	NA	nonsynonymous SNV	ENSG00000166246:ENST00000299320:exon6:c.C904T:p.R302C,ENSG00000166246:ENST00000590191:exon6:c.C946T:p.R316C	NA	NA	16p13.3	NA	NA	NA	NA	rs2075469	0.6	0.6	0.611	0.551518	0.6372	0.6776	0.5576	0.4334	0.4888	0.64	0.71	0.55	0.47	0.6088	0.71	0.09	T	0.894	P	0.311	B	0.801	N	1.000	P	1.245	L	2.56	T	-1.003	T	0.000	T	0.103	1.904	12.33	1.82	0.488	0.399	4.324	1.904312	1.904312	0.18	0.65314	0.494538	ID=COSM435287;OCCURENCE=1(breast)	0.58	NA	5.9341934
1059	8	77765865	77765865	C	T	exonic	ZFHX4	NA	synonymous SNV	ZFHX4:NM_024721:exon10:c.C6708T:p.Y2236Y	exonic	ENSG00000091656	NA	synonymous SNV	ENSG00000091656:ENST00000518282:exon9:c.C6630T:p.Y2210Y,ENSG00000091656:ENST00000050961:exon10:c.C6573T:p.Y2191Y,ENSG00000091656:ENST00000455469:exon10:c.C6573T:p.Y2191Y,ENSG00000091656:ENST00000521891:exon10:c.C6708T:p.Y2236Y	Score=494;Name=lod=136	NA	8q21.11	NA	NA	NA	NA	rs2728455	0.13	0.13	0.122	0.141174	0.2555	0.0327	0.1311	0.0431	0.2751	0.27	0.03	0.14	0.04	0.2194	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.443805	NA	NA	0.258717	0.081557	NA	0.188	NA	5.9330496
1059	13	113897320	113897320	C	T	exonic	CUL4A	NA	synonymous SNV	CUL4A:NM_001008895:exon11:c.C1074T:p.D358D,CUL4A:NM_003589:exon11:c.C774T:p.D258D	exonic	ENSG00000139842	NA	synonymous SNV	ENSG00000139842:ENST00000326335:exon11:c.C774T:p.D258D,ENSG00000139842:ENST00000375440:exon11:c.C1074T:p.D358D,ENSG00000139842:ENST00000375441:exon11:c.C774T:p.D258D,ENSG00000139842:ENST00000451881:exon11:c.C774T:p.D258D	Score=680;Name=lod=775	NA	13q34	NA	NA	NA	NA	rs3764124	0.24	0.24	0.208	0.260982	0.2336	0.3383	0.3271	0.0439	0.456	0.25	0.32	0.3	0.07	0.2692	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.327713	NA	NA	0.23093	0.077167	NA	0.203	NA	5.9329366
1059	1	9777586	9777586	G	C	intronic	PIK3CD	NA	NA	NA	intronic	ENSG00000171608	NA	NA	NA	NA	NA	1p36.22	NA	Name=HEY1,Pol2(b),TAF1,HNF4G_(SC-6558),TCF4,HNF4A,CTCF,CTCF_(SC-5916),Pol2,SP1,NRSF,HDAC2_(SC-6296),Pol2-4H8,BCLAF1_(M33-P5B11),TAF7_(SQ-8)	Name=6	NA	rs28730669	0.01	0.01	NA	0.00778754	0.0298	NA	0.0115	0.0008	NA	0.02	NA	0.01	NA	0.0166	0.021	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.184925	NA	NA	0.021279	0.00522	NA	0.014	NA	5.932321
1059	16	1877913	1877913	C	G	UTR3	FAHD1	NM_031208:c.*8C>G	NA	NA	UTR3	ENSG00000180185	ENST00000427358:c.*8C>G	NA	NA	NA	NA	16p13.3	NA	Name=ERalpha_a	Name=4	NA	rs13166	0.12	0.12	0.116	0.117212	0.1342	0.1042	0.0908	0.0998	0.1554	0.13	0.12	0.11	0.11	0.131	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.017316	NA	NA	0.136047	0.100728	NA	0.138	NA	5.9320864
1059	15	75982428	75982428	C	T	exonic	CSPG4	NA	synonymous SNV	CSPG4:NM_001897:exon3:c.G978A:p.G326G	exonic	ENSG00000173546	NA	synonymous SNV	ENSG00000173546:ENST00000308508:exon3:c.G978A:p.G326G	Score=393;Name=lod=53	NA	15q24.2	NA	NA	NA	NA	rs7182906	0.28	0.28	0.211	0.284145	0.3817	0.1865	0.4006	0.2277	0.2781	0.39	0.14	0.37	0.19	0.3535	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.740454	NA	NA	NA	NA	ID=COSM434332;OCCURENCE=1(breast)	0.225	NA	5.9314666
1059	4	125384532	125384532	G	A	intergenic	LOC285419,ANKRD50	dist=533014;dist=200672	NA	NA	ncRNA_exonic	ENSG00000248565	NA	NA	NA	Score=701;Name=lod=938	NA	4q28.1	NA	Name=CEBPB	NA	NA	rs115074818	0.03	0.03	0.023	0.0229633	0.0686	NA	0.0504	0.0053	0.0041	0.07	NA	0.06	0.002	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.002078	NA	NA	NA	NA	NA	0.036	NA	5.9314
1059	1	15892415	15892415	A	C	exonic	DNAJC16	NA	synonymous SNV	DNAJC16:NM_015291:exon12:c.A1600C:p.R534R	exonic	ENSG00000116138	NA	synonymous SNV	ENSG00000116138:ENST00000375838:exon12:c.A1600C:p.R534R,ENSG00000116138:ENST00000375847:exon12:c.A1600C:p.R534R,ENSG00000116138:ENST00000375849:exon12:c.A1600C:p.R534R,ENSG00000116138:ENST00000475133:exon12:c.A1600C:p.R534R	Score=548;Name=lod=225	NA	1p36.21	NA	NA	NA	NA	rs2236215	0.28	0.28	0.286	0.288139	0.2326	0.0565	0.219	0.6082	0.2004	0.24	0.06	0.28	0.58	0.2552	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.149868	2.149868	NA	0.247558	0.575806	NA	0.297	NA	5.9313086
1059	17	72691928	72691928	T	C	exonic	CD300LF	NA	nonsynonymous SNV	CD300LF:NM_139018:exon6:c.A653G:p.Q218R	exonic	ENSG00000186074	NA	nonsynonymous SNV	ENSG00000186074:ENST00000326165:exon6:c.A653G:p.Q218R,ENSG00000186074:ENST00000464910:exon6:c.A662G:p.Q221R,ENSG00000186074:ENST00000583937:exon6:c.A698G:p.Q233R	NA	NA	17q25.1	NA	Name=CTCF,NRSF	NA	NA	rs2034310	0.72	0.72	0.698	0.705072	0.8141	0.6647	0.7089	0.6089	0.7618	0.81	0.67	0.72	0.65	0.7736	0.81	0.78	T	0.001	B	0.001	B	0.380	N	1.000	P	-0.55	N	0.91	T	-1.005	T	0.000	T	0.049	-0.267	2.721	-0.605	-0.239	-0.152	4.390	-0.266639	NA	0.65	0.814767	0.640944	ID=COSM1385797,COSM1385796;OCCURENCE=1(large_intestine)	0.761	NA	5.9308664
1059	7	111387274	111387274	G	C	intronic	DOCK4	NA	NA	NA	intronic	ENSG00000128512	NA	NA	NA	NA	NA	7q31.1	NA	Name=FOXA2_(SC-6554)	Name=5	NA	rs60607828	0.02	0.02	0.024	0.0273562	0.0288	NA	0.0216	0.0688	0.002	0.03	NA	0.01	0.04	0.0216	0.065	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.381436	NA	NA	0.019156	0.063421	NA	0.065	NA	5.930444
1059	2	219492924	219492924	T	C	exonic	PLCD4	NA	synonymous SNV	PLCD4:NM_032726:exon7:c.T945C:p.C315C	exonic	ENSG00000115556	NA	synonymous SNV	ENSG00000115556:ENST00000417849:exon7:c.T945C:p.C315C,ENSG00000115556:ENST00000432688:exon7:c.T945C:p.C315C,ENSG00000115556:ENST00000450993:exon7:c.T945C:p.C315C	Score=558;Name=lod=248	NA	2q35	NA	NA	Name=2	NA	rs612874	0.52	0.52	0.461	0.508986	0.5934	0.7827	0.5879	0.0711	0.6759	0.6	0.76	0.6	0.07	0.5704	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.31098	1.31098	NA	0.572453	0.156096	NA	0.37	NA	5.9304136
1059	13	27591826	27591826	A	T	intergenic	GPR12,USP12	dist=256904;dist=48461	NA	NA	ncRNA_exonic	ENSG00000218198	NA	NA	NA	Score=700;Name=lod=931	NA	13q12.13	NA	NA	Name=14	NA	rs7997146	0.08	0.08	0.078	0.100439	0.0696	0.0704	0.0749	0.1415	0.1258	0.07	0.06	0.08	0.12	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.674106	NA	NA	NA	NA	NA	0.094	NA	5.9304
1059	10	61831744	61831744	A	G	exonic	ANK3	NA	synonymous SNV	ANK3:NM_020987:exon37:c.T8895C:p.A2965A	exonic	ENSG00000151150	NA	synonymous SNV	ENSG00000151150:ENST00000280772:exon37:c.T8895C:p.A2965A	NA	NA	10q21.2	NA	NA	NA	NA	rs10740006	0.15	0.15	0.117	0.125998	0.2724	0.0347	0.2104	0.0204	0.1524	0.26	0.04	0.22	0.03	0.2023	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.046917	NA	NA	0.26186	0.051294	NA	0.174	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116344.2;CLNDSDB=.;CLNDSDBID=.	5.9301066
1059	6	32811530	32811530	A	C	intronic	PSMB8	NA	NA	NA	intronic	ENSG00000204264	NA	NA	NA	NA	NA	6p21.32	NA	Name=PU.1	Name=2	NA	rs4713599	0.07	0.07	0.078	0.0726837	0.0706	0.0645	0.0793	0.0658	0.0879	0.07	0.07	0.09	0.06	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.443263	NA	NA	NA	NA	NA	0.087	NA	5.9294
1059	19	53507523	53507523	T	C	intergenic	ZNF702P,ERVV-1	dist=10739;dist=9821	NA	NA	ncRNA_exonic	ENSG00000268282	NA	NA	NA	Score=604;Name=lod=381	NA	19q13.41	NA	NA	Name=4	NA	rs1661909	0.33	0.33	0.35	0.352037	0.0706	0.4365	0.2133	0.7451	0.1217	0.08	0.42	0.2	0.72	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.124353	NA	NA	NA	NA	ID=COSN165921;OCCURENCE=1(breast)	0.297	NA	5.9294
1059	19	53507710	53507710	G	A	intergenic	ZNF702P,ERVV-1	dist=10926;dist=9634	NA	NA	ncRNA_exonic	ENSG00000268282	NA	NA	NA	NA	NA	19q13.41	NA	Name=USF-1	Name=4	NA	rs1650938	0.31	0.31	0.315	0.316494	0.0706	0.4365	0.1988	0.618	0.1217	0.08	0.42	0.18	0.63	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.732951	NA	NA	NA	NA	NA	0.326	NA	5.9294
1059	11	4790410	4790410	A	G	exonic	OR51F1	NA	synonymous SNV	OR51F1:NM_001004752:exon1:c.T738C:p.H246H	exonic	ENSG00000188069	NA	synonymous SNV	ENSG00000188069:ENST00000343430:exon1:c.T738C:p.H246H,ENSG00000188069:ENST00000380383:exon1:c.T759C:p.H253H	Score=343;Name=lod=33	NA	11p15.4	NA	NA	NA	NA	rs1030724	0.22	0.22	0.222	0.215455	0.2704	NA	0.2017	0.4561	0.0654	0.24	NA	0.22	0.43	0.2138	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.782708	NA	NA	0.253374	0.446388	NA	0.29	NA	5.9290926
1059	1	207238419	207238419	C	T	exonic	PFKFB2	NA	synonymous SNV	PFKFB2:NM_001018053:exon8:c.C546T:p.N182N,PFKFB2:NM_006212:exon8:c.C546T:p.N182N	exonic	ENSG00000123836	NA	synonymous SNV	ENSG00000123836:ENST00000367079:exon8:c.C546T:p.N182N,ENSG00000123836:ENST00000367080:exon8:c.C546T:p.N182N,ENSG00000123836:ENST00000411990:exon8:c.C252T:p.N84N,ENSG00000123836:ENST00000545806:exon8:c.C447T:p.N149N	Score=616;Name=lod=425	NA	1q32.2	NA	NA	NA	NA	rs72741390	0.13	0.13	0.111	0.110823	0.2753	0.0079	0.1542	0.0257	0.1319	0.27	0.01	0.17	0.03	0.2019	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.28593	1.28593	NA	0.260465	0.05833	NA	0.188	NA	5.9290016
1059	11	100909991	100909991	T	C	exonic	PGR	NA	synonymous SNV	PGR:NM_001271161:exon7:c.A1860G:p.Q620Q,PGR:NM_000926:exon8:c.A2658G:p.Q886Q,PGR:NM_001202474:exon8:c.A2166G:p.Q722Q,PGR:NM_001271162:exon8:c.A876G:p.Q292Q	exonic	ENSG00000082175	NA	synonymous SNV	ENSG00000082175:ENST00000263463:exon7:c.A2352G:p.Q784Q,ENSG00000082175:ENST00000325455:exon8:c.A2658G:p.Q886Q,ENSG00000082175:ENST00000534013:exon8:c.A876G:p.Q292Q	Score=700;Name=lod=937	NA	11q22.1	NA	NA	NA	NA	rs500760	0.29	0.29	0.281	0.261581	0.2525	0.2133	0.2651	0.413	0.1135	0.26	0.23	0.3	0.41	0.2415	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.575704	NA	NA	0.244475	0.381071	NA	0.362	NA	5.9281916
1059	11	92623877	92623877	G	A	exonic	FAT3	NA	synonymous SNV	FAT3:NM_001008781:exon25:c.G13272A:p.P4424P	exonic	ENSG00000165323	NA	synonymous SNV	ENSG00000165323:ENST00000533797:exon8:c.G2277A:p.P759P,ENSG00000165323:ENST00000409404:exon25:c.G13272A:p.P4424P,ENSG00000165323:ENST00000298047:exon27:c.G13368A:p.P4456P,ENSG00000165323:ENST00000525166:exon27:c.G12918A:p.P4306P	NA	NA	11q14.3	Score=794;Name=V$OLF1_01	NA	NA	NA	rs12277422	0.25	0.25	0.237	0.226238	0.2455	0.2381	0.2954	0.2148	0.1605	0.24	0.25	0.27	0.25	0.2439	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.105914	NA	NA	0.24958	0.2199	NA	0.174	NA	5.9276866
1059	6	15496662	15496662	C	T	exonic	JARID2	NA	synonymous SNV	JARID2:NM_001267040:exon7:c.C690T:p.P230P,JARID2:NM_004973:exon7:c.C1206T:p.P402P	exonic	ENSG00000008083	NA	synonymous SNV	ENSG00000008083:ENST00000541660:exon6:c.C1092T:p.P364P,ENSG00000008083:ENST00000341776:exon7:c.C1206T:p.P402P,ENSG00000008083:ENST00000397311:exon7:c.C690T:p.P230P	Score=805;Name=lod=2497	NA	6p22.3	NA	NA	NA	NA	rs742099	0.21	0.21	0.209	0.1877	0.2515	0.3056	0.2147	0.056	0.1595	0.25	0.28	0.2	0.06	0.2332	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.212573	NA	NA	0.254419	0.085792	NA	0.246	NA	5.9275476
1059	5	42908745	42908745	C	T	intergenic	SEPP1,LOC648987	dist=96721;dist=106086	NA	NA	ncRNA_exonic	ENSG00000251656	NA	NA	NA	NA	NA	5p12	NA	Name=ZNF263	Name=148	NA	rs72759075	0.05	0.05	0.045	0.0419329	0.0726	0.003	0.0692	0.0461	0.0256	0.07	0.0017	0.08	0.04	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.43433	NA	NA	NA	NA	NA	0.072	NA	5.9274
1059	19	10284415	10284415	A	G	intronic	DNMT1	NA	NA	NA	intronic	ENSG00000130816	NA	NA	NA	NA	NA	19p13.2	NA	Name=TFIIIC-110,CEBPB	Name=79	NA	rs3745270	0.22	0.22	0.189	0.236022	0.0726	0.3958	0.1888	0.2557	0.2464	0.07	0.42	0.18	0.27	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.179088	NA	NA	NA	NA	NA	0.246	NA	5.9274
1059	22	25099392	25099392	G	A	intergenic	POM121L10P,PIWIL3	dist=44278;dist=15609	NA	NA	ncRNA_exonic	ENSG00000237601	NA	NA	NA	Score=505;Name=lod=150	NA	22q11.23	NA	Name=GATA-1,p300	NA	NA	rs78093638	0.08	0.08	0.067	0.0690895	0.0726	0.1181	0.1182	0.003	0.0695	0.07	0.14	0.1	0.01	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.707294	NA	NA	NA	NA	NA	0.022	NA	5.9274
1059	16	21145648	21145648	C	T	exonic	DNAH3	NA	synonymous SNV	DNAH3:NM_017539:exon7:c.G1014A:p.K338K	exonic	ENSG00000158486	NA	synonymous SNV	ENSG00000158486:ENST00000261383:exon7:c.G1014A:p.K338K,ENSG00000158486:ENST00000415178:exon7:c.G1014A:p.K338K	Score=420;Name=lod=68	NA	16p12.3	NA	NA	NA	NA	rs11074483	0.27	0.27	0.245	0.2498	0.2336	0.2946	0.3646	0.1853	0.226	0.26	0.31	0.31	0.2	0.2615	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.333816	1.333816	NA	0.244186	0.20786	ID=COSM148041,COSM148042;OCCURENCE=1(stomach)	0.326	NA	5.9273806
1059	6	146678882	146678882	G	A	intronic	GRM1	NA	NA	NA	intronic	ENSG00000152822	NA	NA	NA	NA	NA	6q24.3	NA	Name=CEBPB,STAT3	Name=124	NA	rs362892	0.01	0.01	0.014	0.00958466	0.0298	NA	0.0159	0.0053	NA	0.03	NA	0.02	0.01	0.0171	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.066878	NA	NA	0.026418	0.007159	NA	NA	NA	5.926682
1059	4	47643863	47643863	T	C	intronic	CORIN	NA	NA	NA	intronic	ENSG00000145244	NA	NA	NA	Score=284;Name=lod=19	NA	4p12	NA	NA	Name=36	NA	rs17462783	0.07	0.07	0.076	0.0640974	0.0746	0.004	0.0375	0.1445	0.0256	0.08	0.01	0.05	0.15	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.090781	NA	NA	NA	NA	NA	0.065	NA	5.9254
1059	17	74273187	74273187	G	A	intronic	QRICH2	NA	NA	NA	intronic	ENSG00000129646	NA	NA	NA	NA	NA	17q25.1	NA	Name=AP-2gamma,STAT1	Name=59	NA	rs73999020	0.07	0.07	0.041	0.0786741	0.0746	0.003	0.1974	0.0673	0.092	0.07	0.0017	0.17	0.06	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.617997	NA	NA	NA	NA	NA	0.109	NA	5.9254
1059	1	76198309	76198309	T	C	intronic	ACADM	NA	NA	NA	intronic	ENSG00000117054	NA	NA	NA	NA	NA	1p31.1	NA	NA	Name=18	NA	rs74090724	0.04	0.04	0.045	0.0401358	0.0179	NA	0.0245	0.1218	0.0051	0.01	NA	0.03	0.13	0.0277	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.096746	NA	NA	0.029309	0.101047	NA	0.014	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000077880.1|RCV000123472.1;CLNDSDB=.|.;CLNDSDBID=.|.	5.925091
1060	3	133486958	133486958	G	C	exonic	TF	NA	synonymous SNV	TF:NM_001063:exon13:c.G1572C:p.L524L	exonic	ENSG00000091513	NA	synonymous SNV	ENSG00000091513:ENST00000264998:exon12:c.G1191C:p.L397L,ENSG00000091513:ENST00000402696:exon13:c.G1572C:p.L524L	Score=289;Name=lod=20	NA	3q22.1	NA	NA	NA	NA	rs8649	0.22	0.22	0.218	0.21246	0.2614	0.0714	0.1787	0.3457	0.1513	0.25	0.09	0.21	0.32	0.2219	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.159781	NA	NA	0.258721	0.308443	NA	0.312	NA	5.9246456
1060	22	32590449	32590449	G	A	exonic	RFPL2	NA	nonsynonymous SNV	RFPL2:NM_001098527:exon3:c.C148T:p.R50C	exonic	ENSG00000128253	NA	nonsynonymous SNV	ENSG00000128253:ENST00000400237:exon3:c.C148T:p.R50C	NA	NA	22q12.3	NA	NA	NA	NA	rs108211	0.44	0.44	0.458	0.46845	0.4801	0.1498	0.3775	0.82	0.3742	0.48	0.13	0.38	0.8	0.4579	0.8	0.34	T	0.002	B	0.0	B	.	.	1.000	P	0	N	0.21	T	-0.998	T	0.000	T	0.038	-0.483	1.778	-1.32	-0.288	-0.810	4.348	-0.482759	NA	0.11	0.470966	0.768176	NA	0.486	NA	5.9243674
1060	19	23159486	23159486	T	C	exonic	ZNF728	NA	nonsynonymous SNV	ZNF728:NM_001267716:exon4:c.A653G:p.Y218C	exonic	ENSG00000269067	NA	nonsynonymous SNV	ENSG00000269067:ENST00000594710:exon4:c.A653G:p.Y218C	NA	NA	19p12	NA	NA	NA	NA	rs289318	0.26	0.26	0.283	0.259585	0.1938	0.1736	0.1441	0.4992	0.1738	0.19	0.18	0.17	0.5	0.2154	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.197313	NA	NA	NA	NA	NA	0.348	NA	5.9241334
1060	16	5064917	5064917	C	T	exonic	SEC14L5	NA	synonymous SNV	SEC14L5:NM_014692:exon16:c.C2037T:p.A679A	exonic	ENSG00000103184	NA	synonymous SNV	ENSG00000103184:ENST00000251170:exon16:c.C2037T:p.A679A	Score=381;Name=lod=47	NA	16p13.3	NA	NA	NA	NA	rs2012649	0.18	0.18	0.122	0.153155	0.2624	0.0645	0.3833	0.0371	0.1258	0.27	0.05	0.37	0.05	0.2285	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.440949	NA	NA	0.251698	0.076424	NA	0.239	NA	5.9240686
1060	6	88853635	88853635	C	T	exonic	CNR1	NA	synonymous SNV	CNR1:NM_001160259:exon2:c.G1359A:p.T453T,CNR1:NM_016083:exon2:c.G1359A:p.T453T,CNR1:NM_033181:exon2:c.G1260A:p.T420T,CNR1:NM_001160226:exon3:c.G1359A:p.T453T,CNR1:NM_001160258:exon4:c.G1359A:p.T453T	exonic	ENSG00000118432	NA	synonymous SNV	ENSG00000118432:ENST00000549890:exon1:c.G1359A:p.T453T,ENSG00000118432:ENST00000369499:exon2:c.G1359A:p.T453T,ENSG00000118432:ENST00000369501:exon2:c.G1359A:p.T453T,ENSG00000118432:ENST00000428600:exon2:c.G1359A:p.T453T,ENSG00000118432:ENST00000468898:exon2:c.G1260A:p.T420T,ENSG00000118432:ENST00000535130:exon2:c.G1359A:p.T453T,ENSG00000118432:ENST00000537554:exon2:c.G1359A:p.T453T,ENSG00000118432:ENST00000549716:exon2:c.G1176A:p.T392T	Score=615;Name=lod=422	NA	6q15	NA	NA	NA	NA	rs1049353	0.14	0.14	0.133	0.129393	0.2584	0.0764	0.147	0.0287	0.1748	0.27	0.07	0.12	0.03	0.2136	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.145492	NA	NA	0.27093	0.071266	NA	0.109	NA	5.9237366
1060	2	220432014	220432014	G	A	exonic	OBSL1	NA	synonymous SNV	OBSL1:NM_001173408:exon4:c.C1818T:p.F606F,OBSL1:NM_001173431:exon4:c.C1818T:p.F606F,OBSL1:NM_015311:exon4:c.C1818T:p.F606F	exonic	ENSG00000124006	NA	synonymous SNV	ENSG00000124006:ENST00000265318:exon4:c.C1818T:p.F606F,ENSG00000124006:ENST00000289656:exon4:c.C579T:p.F193F,ENSG00000124006:ENST00000373873:exon4:c.C1818T:p.F606F,ENSG00000124006:ENST00000373876:exon4:c.C1818T:p.F606F,ENSG00000124006:ENST00000404537:exon4:c.C1818T:p.F606F,ENSG00000124006:ENST00000603926:exon4:c.C1818T:p.F606F	Score=363;Name=lod=40	NA	2q35	NA	NA	NA	NA	rs61732787	0.17	0.17	0.152	0.171725	0.2425	0.1151	0.2017	0.0454	0.3067	0.24	0.13	0.23	0.06	0.2486	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.424319	NA	NA	0.25187	0.08642	NA	0.181	NA	5.9236966
1060	15	56299233	56299233	G	A	intergenic	NEDD4,RFX7	dist=13398;dist=83498	NA	NA	ncRNA_exonic	ENSG00000230183	NA	NA	NA	Score=592;Name=lod=341	NA	15q21.3	NA	NA	Name=9	NA	rs62046379	0.07	0.07	0.045	0.0802716	0.0765	0.0179	0.1556	0.0976	0.0716	0.06	0.01	0.12	0.09	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.501143	NA	NA	NA	NA	NA	0.029	NA	5.9235
1060	2	30959366	30959366	T	C	intronic	CAPN13	NA	NA	NA	intronic	ENSG00000162949	NA	NA	NA	Score=343;Name=lod=33	NA	2p23.1	Score=766;Name=V$SRF_01	NA	NA	NA	rs11889549	0.02	0.02	0.014	0.0199681	0.0298	0.002	0.0202	0.0015	0.0532	0.03	0.0017	0.02	0.002	0.0222	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.19466	NA	NA	0.024916	0.004	NA	0.007	NA	5.923084
1060	2	206813906	206813906	A	G	intergenic	NRP2,INO80D	dist=151049;dist=44539	NA	NA	ncRNA_exonic	ENSG00000213739	NA	NA	NA	Score=676;Name=lod=744	NA	2q33.3	NA	Name=CTCF	NA	NA	rs75967462	0.06	0.06	0.034	0.0505192	0.0775	NA	0.1974	0.0166	0.0164	0.08	NA	0.17	0.02	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.377487	NA	NA	NA	NA	NA	0.145	NA	5.9225
1060	2	233280822	233280822	G	T	intergenic	ALPPL2,ALPI	dist=5398;dist=40011	NA	NA	ncRNA_exonic	ENSG00000204121	NA	NA	NA	Score=599;Name=lod=363	NA	2q37.1	Score=861;Name=V$GR_Q6	NA	NA	NA	rs744874	0.1	0.1	0.102	0.0866613	0.0775	0.2044	0.0605	0.028	0.0726	0.08	0.2	0.06	0.04	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.468497	NA	NA	NA	NA	NA	0.138	NA	5.9225
1060	9	35705759	35705759	G	A	exonic	TLN1	NA	synonymous SNV	TLN1:NM_006289:exon42:c.C5601T:p.T1867T	exonic	ENSG00000137076	NA	synonymous SNV	ENSG00000137076:ENST00000540444:exon41:c.C5403T:p.T1801T,ENSG00000137076:ENST00000314888:exon42:c.C5601T:p.T1867T	Score=514;Name=lod=163	NA	9p13.3	NA	NA	NA	NA	rs11541908	0.21	0.21	0.198	0.169129	0.2515	0.253	0.2305	0.0197	0.1564	0.24	0.29	0.25	0.02	0.2264	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.509809	NA	NA	0.26686	0.060145	NA	0.188	NA	5.9219066
1060	3	196743130	196743130	T	C	exonic	MFI2	NA	synonymous SNV	MFI2:NM_005929:exon8:c.A1011G:p.T337T	exonic	ENSG00000163975	NA	synonymous SNV	ENSG00000163975:ENST00000296350:exon8:c.A1011G:p.T337T	NA	NA	3q29	Score=848;Name=V$CEBP_C	NA	NA	NA	rs6779362	0.31	0.31	0.305	0.319089	0.2455	0.2976	0.2046	0.4743	0.2883	0.24	0.31	0.21	0.51	0.2671	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.035214	NA	NA	0.233256	0.435769	ID=COSM1131492;OCCURENCE=1(prostate)	0.268	NA	5.9208106
1060	3	42842675	42842675	C	A	intronic	HIGD1A	NA	NA	NA	intronic	ENSG00000181061	NA	NA	NA	Score=609;Name=lod=399	NA	3p22.1	NA	NA	Name=3	NA	rs7613025	0.03	0.03	0.033	0.0403355	0.0795	0.003	0.0202	NA	0.1074	0.08	0.0035	0.02	NA	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.725406	NA	NA	NA	NA	NA	0.029	NA	5.9205
1060	3	42842699	42842699	C	A	intronic	HIGD1A	NA	NA	NA	intronic	ENSG00000181061	NA	NA	NA	Score=609;Name=lod=399	NA	3p22.1	NA	NA	Name=3	NA	rs34822053	0.03	0.03	NA	0.0403355	0.0795	0.003	0.0202	NA	0.1074	0.08	0.0035	0.02	NA	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.514393	NA	NA	NA	NA	NA	0.029	NA	5.9205
1060	19	51296851	51296851	G	A	intronic	ACPT	NA	NA	NA	intronic	ENSG00000142513	NA	NA	NA	NA	NA	19q13.33	NA	Name=Pol2(phosphoS2),Pol2	Name=9	NA	rs266124	0.13	0.13	0.119	0.133786	0.0795	0.126	0.0821	0.2761	0.0419	0.08	0.13	0.11	0.24	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.064308	NA	NA	NA	NA	NA	0.116	NA	5.9205
1060	17	15690793	15690793	T	C	ncRNA_exonic	MEIS3P1	NA	NA	NA	ncRNA_exonic	ENSG00000179277	NA	NA	NA	Score=767;Name=lod=1747	NA	17p12	NA	Name=NRSF	NA	NA	rs534861	0.44	0.44	0.401	0.538339	0.3032	0.5556	0.5259	0.7042	0.547	0.24	0.52	0.43	0.66	0.4434	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.309031	NA	NA	NA	NA	NA	0.406	NA	5.9200666
1060	13	24696820	24696820	G	A	intergenic	ANKRD20A19P,SPATA13	dist=173366;dist=38041	NA	NA	ncRNA_exonic	ENSG00000225674	NA	NA	NA	Score=726;Name=lod=1194	NA	13q12.12	NA	NA	Name=2	NA	rs4770594	0.14	0.14	0.121	0.142372	0.0805	0.3115	0.1628	0.0234	0.1779	0.08	0.31	0.15	0.01	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.085639	NA	NA	NA	NA	NA	0.043	NA	5.9195
1060	8	144885580	144885580	A	G	exonic	SCRIB	NA	synonymous SNV	SCRIB:NM_015356:exon24:c.T3576C:p.F1192F,SCRIB:NM_182706:exon24:c.T3576C:p.F1192F	exonic	ENSG00000180900	NA	synonymous SNV	ENSG00000180900:ENST00000320476:exon24:c.T3576C:p.F1192F,ENSG00000180900:ENST00000356994:exon24:c.T3576C:p.F1192F,ENSG00000180900:ENST00000377533:exon24:c.T3333C:p.F1111F	Score=409;Name=lod=61	NA	8q24.3	NA	NA	NA	NA	rs13281371	0.93	0.93	0.906	0.933906	0.9085	0.9752	0.9438	0.8918	0.9673	0.91	0.98	0.92	0.91	0.927	0.98	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	-0.523	1.615	-2.22	-0.623	-0.362	11.331	-0.523042	NA	NA	0.911806	0.900913	NA	0.471	NA	5.9193606
1060	17	3657175	3657175	T	C	exonic	ITGAE	NA	nonsynonymous SNV	ITGAE:NM_002208:exon13:c.A1429G:p.I477V	exonic	ENSG00000083457	NA	nonsynonymous SNV	ENSG00000083457:ENST00000263087:exon13:c.A1429G:p.I477V	NA	NA	17p13.2	NA	NA	NA	NA	rs220479	0.74	0.74	0.769	0.710264	0.8618	0.4058	0.6167	0.9887	0.5583	0.85	0.41	0.69	0.98	0.7359	0.98	1	T	0.001	B	0.002	B	.	.	1.000	P	-1.235	N	2.37	T	-1.005	T	0.000	T	0.037	-2.501	0.003	-3.83	-0.905	-0.538	6.700	-2.501285	NA	1	0.816512	0.955515	NA	0.739	NA	5.9191214
1060	5	178310446	178310446	C	T	exonic	ZNF354B	NA	synonymous SNV	ZNF354B:NM_058230:exon5:c.C993T:p.G331G	exonic	ENSG00000178338	NA	synonymous SNV	ENSG00000178338:ENST00000322434:exon5:c.C993T:p.G331G	Score=361;Name=lod=39	NA	5q35.3	NA	Name=KAP1,SETDB1	NA	NA	rs4130052	0.47	0.47	0.441	0.42512	0.6133	0.247	0.4121	0.4728	0.3599	0.61	0.24	0.46	0.52	0.5204	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.320325	NA	NA	0.614096	0.487738	ID=COSM150027;OCCURENCE=1(stomach)	0.442	NA	5.9188706
1060	9	129377855	129377855	G	C	intronic	LMX1B	NA	NA	NA	intronic	ENSG00000136944	NA	NA	NA	Score=734;Name=lod=1281	NA	9q33.3	NA	Name=ELF1_(SC-631),SUZ12,c-Myc,ERalpha_a,FOXA1_(C-20)	Name=49	NA	rs1336980	0.23	0.23	0.231	0.227636	0.3738	0.131	0.245	0.1089	0.3252	0.37	0.13	0.28	0.09	0.3403	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.557989	2.557989	NA	0.367209	0.154108	NA	0.014	NA	5.918691
1060	6	117753564	117753564	C	A	intergenic	ROS1,DCBLD1	dist=6546;dist=50256	NA	NA	ncRNA_exonic	ENSG00000219703	NA	NA	NA	Score=683;Name=lod=797	NA	6q22.1	NA	NA	Name=8	NA	rs80156168	0.05	0.05	0.049	0.0479233	0.0815	0.0516	0.0605	0.0038	0.0603	0.09	0.04	0.06	0.01	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.778609	NA	NA	NA	NA	NA	0.087	NA	5.9185
1060	13	24696508	24696508	C	T	intergenic	ANKRD20A19P,SPATA13	dist=173054;dist=38353	NA	NA	ncRNA_exonic	ENSG00000225674	NA	NA	NA	Score=704;Name=lod=972	NA	13q12.12	NA	Name=c-Fos	NA	NA	rs9551064	0.18	0.18	0.159	0.176318	0.0815	0.3115	0.1758	0.1445	0.1779	0.09	0.32	0.18	0.17	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.068609	NA	NA	NA	NA	ID=COSN164434;OCCURENCE=1(breast)	0.072	NA	5.9185
1060	19	49391585	49391585	A	G	intronic	TULP2	NA	NA	NA	intronic	ENSG00000104804	NA	NA	NA	NA	NA	19q13.33	NA	Name=NF-YA,NF-YB	Name=9	NA	rs8112951	0.18	0.18	0.206	0.197883	0.0825	0.119	0.1095	0.4418	0.1309	0.09	0.14	0.12	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.139148	NA	NA	NA	NA	NA	0.174	NA	5.9175
1060	1	76255228	76255228	G	A	ncRNA_exonic	SNORD45B	NA	NA	NA	ncRNA_exonic	ENSG00000201487	NA	NA	NA	Score=349;Name=lod=35	NA	1p31.1	NA	NA	Name=10	NA	rs11161620	0.17	0.17	0.163	0.159944	0.2773	0.0238	0.219	0.112	0.2025	0.26	0.02	0.25	0.14	0.2106	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.65592	2.65592	NA	0.261678	0.13984	NA	0.225	NA	5.9170886
1060	1	181741301	181741301	C	T	exonic	CACNA1E	NA	synonymous SNV	CACNA1E:NM_001205294:exon36:c.C5016T:p.N1672N,CACNA1E:NM_000721:exon37:c.C5073T:p.N1691N,CACNA1E:NM_001205293:exon37:c.C5073T:p.N1691N	exonic	ENSG00000198216	NA	synonymous SNV	ENSG00000198216:ENST00000358338:exon36:c.C4869T:p.N1623N,ENSG00000198216:ENST00000360108:exon36:c.C5016T:p.N1672N,ENSG00000198216:ENST00000526775:exon36:c.C5016T:p.N1672N,ENSG00000198216:ENST00000357570:exon37:c.C4926T:p.N1642N,ENSG00000198216:ENST00000367567:exon37:c.C3894T:p.N1298N,ENSG00000198216:ENST00000367570:exon37:c.C5073T:p.N1691N,ENSG00000198216:ENST00000367573:exon37:c.C5073T:p.N1691N	Score=628;Name=lod=476	NA	1q25.3	NA	NA	NA	NA	rs199930	0.2	0.2	0.196	0.245407	0.2555	0.0754	0.281	0.2791	0.3395	0.26	0.06	0.23	0.23	0.2485	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.441119	1.441119	NA	0.246147	0.253769	NA	0.225	NA	5.9165196
1060	8	144697041	144697041	A	G	exonic	TSTA3	NA	synonymous SNV	TSTA3:NM_003313:exon4:c.T306C:p.F102F	exonic	ENSG00000104522	NA	synonymous SNV	ENSG00000104522:ENST00000425753:exon4:c.T306C:p.F102F,ENSG00000104522:ENST00000526290:exon4:c.T306C:p.F102F,ENSG00000104522:ENST00000529048:exon4:c.T306C:p.F102F,ENSG00000104522:ENST00000529064:exon4:c.T306C:p.F102F,ENSG00000104522:ENST00000533817:exon4:c.T306C:p.F102F	Score=389;Name=lod=51	NA	8q24.3	NA	NA	NA	NA	rs1049832	0.38	0.38	0.317	0.332268	0.6203	0.2302	0.464	0.09	0.3753	0.62	0.21	0.54	0.08	0.5021	0.63	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.929	T	0.000	T	.	0.676	7.615	-0.778	-0.336	-0.697	10.942	0.675643	NA	NA	0.628488	0.178847	NA	0.319	NA	5.9157786
1060	8	144662353	144662353	G	A	exonic	EEF1D	NA	synonymous SNV	EEF1D:NM_001130056:exon6:c.C564T:p.A188A,EEF1D:NM_001130057:exon7:c.C636T:p.A212A,EEF1D:NM_001195203:exon7:c.C579T:p.A193A,EEF1D:NM_001960:exon7:c.C636T:p.A212A,EEF1D:NM_001130055:exon8:c.C636T:p.A212A,EEF1D:NM_001130053:exon9:c.C1734T:p.A578A,EEF1D:NM_032378:exon9:c.C1734T:p.A578A	exonic	ENSG00000104529	NA	synonymous SNV	ENSG00000104529:ENST00000529576:exon2:c.C156T:p.A52A,ENSG00000104529:ENST00000528382:exon3:c.C6T:p.A2A,ENSG00000104529:ENST00000528610:exon6:c.C564T:p.A188A,ENSG00000104529:ENST00000531621:exon6:c.C507T:p.A169A,ENSG00000104529:ENST00000317198:exon7:c.C636T:p.A212A,ENSG00000104529:ENST00000395119:exon7:c.C636T:p.A212A,ENSG00000104529:ENST00000524624:exon7:c.C564T:p.A188A,ENSG00000104529:ENST00000526838:exon7:c.C579T:p.A193A,ENSG00000104529:ENST00000529272:exon7:c.C636T:p.A212A,ENSG00000104529:ENST00000532741:exon7:c.C1884T:p.A628A,ENSG00000104529:ENST00000419152:exon8:c.C636T:p.A212A,ENSG00000104529:ENST00000534380:exon8:c.C636T:p.A212A,ENSG00000104529:ENST00000423316:exon9:c.C1734T:p.A578A,ENSG00000104529:ENST00000442189:exon9:c.C1734T:p.A578A	Score=534;Name=lod=197	NA	8q24.3	NA	NA	NA	NA	rs1062391	0.43	0.43	0.376	0.374002	0.6163	0.3998	0.4539	0.0983	0.4141	0.62	0.36	0.53	0.15	0.5114	0.62	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.940	T	0.000	T	.	1.525	11.05	-0.8	-0.058	-0.747	4.35	1.524662	1.524662	NA	0.623284	0.173173	NA	0.384	NA	5.9156826
1060	1	22033152	22033152	G	A	intronic	USP48	NA	NA	NA	intronic	ENSG00000090686	NA	NA	NA	NA	NA	1p36.12	NA	Name=EBF,USF2,NRSF,c-Myc,Max,USF-1,EBF1_(C-8),CEBPB	Name=77	NA	rs41265993	0.04	0.04	0.032	0.0385383	0.0845	0.002	0.0418	0.0333	0.0337	0.08	0.0017	0.04	0.02	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.023783	NA	NA	NA	NA	NA	0.022	NA	5.9155
1060	8	125487693	125487693	G	T	intronic	RNF139	NA	NA	NA	intronic	ENSG00000170881	NA	NA	NA	NA	NA	8q24.13	NA	Name=c-Myc,CTCF_(C-20),Ini1,CTCF_(SC-5916),Sin3Ak-20,HA-E2F1,CTCF,CTCFL_(SC-98982),Pol2(phosphoS2),Mxi1_(bHLH),Pol2	Name=107	NA	rs72713053	0.1	0.1	0.106	0.0922524	0.0845	0.1419	0.0461	0.1157	0.0501	0.08	0.13	0.06	0.14	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.626819	2.626819	NA	NA	NA	NA	0.072	NA	5.9155
1060	13	24696854	24696854	A	G	intergenic	ANKRD20A19P,SPATA13	dist=173400;dist=38007	NA	NA	ncRNA_exonic	ENSG00000225674	NA	NA	NA	Score=726;Name=lod=1194	NA	13q12.12	NA	NA	Name=2	NA	rs4770595	0.27	0.27	0.245	0.249601	0.0845	0.3938	0.1902	0.3336	0.1994	0.12	0.41	0.22	0.37	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.204957	NA	NA	NA	NA	NA	0.138	NA	5.9155
1061	2	220040330	220040330	A	G	exonic	CNPPD1	NA	synonymous SNV	CNPPD1:NM_015680:exon3:c.T243C:p.Y81Y	exonic	ENSG00000115649	NA	synonymous SNV	ENSG00000115649:ENST00000360507:exon3:c.T243C:p.Y81Y,ENSG00000115649:ENST00000451647:exon3:c.T243C:p.Y81Y,ENSG00000115649:ENST00000409789:exon4:c.T243C:p.Y81Y,ENSG00000115649:ENST00000453038:exon4:c.T243C:p.Y81Y	Score=629;Name=lod=479	NA	2q35	Score=796;Name=V$MYCMAX_03	NA	NA	NA	rs1127101	0.42	0.42	0.387	0.401957	0.6163	0.2302	0.402	0.2421	0.5746	0.63	0.26	0.45	0.27	0.5332	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.819823	NA	NA	0.602442	0.29074	NA	0.493	NA	5.9147246
1061	5	141314250	141314250	G	A	intronic	KIAA0141	NA	NA	NA	intronic	ENSG00000081791	NA	NA	NA	NA	NA	5q31.3	NA	Name=ZNF263,GATA-2	Name=22	NA	rs2286523	0.05	0.05	0.04	0.0607029	0.0855	0.0099	0.0447	0.0333	0.136	0.08	0.01	0.06	0.04	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.548571	NA	NA	NA	NA	NA	0.051	NA	5.9145
1061	5	141330954	141330954	C	T	intronic	PCDH12	NA	NA	NA	intronic	ENSG00000113555	NA	NA	NA	NA	NA	5q31.3	NA	Name=CTCF,EBF1_(C-8),Rad21,CTCF_(C-20)	Name=43	NA	rs35153199	0.05	0.05	0.047	0.0547125	0.0855	0.0079	0.0461	0.0242	0.1186	0.08	0.01	0.06	0.03	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.547677	NA	NA	NA	NA	NA	0.051	NA	5.9145
1061	19	18368810	18368810	G	T	exonic	KIAA1683	NA	nonsynonymous SNV	KIAA1683:NM_001145304:exon4:c.C3284A:p.P1095H,KIAA1683:NM_001145305:exon4:c.C2585A:p.P862H,KIAA1683:NM_025249:exon4:c.C2723A:p.P908H	exonic	ENSG00000130518	NA	nonsynonymous SNV	ENSG00000130518:ENST00000392413:exon4:c.C3284A:p.P1095H,ENSG00000130518:ENST00000600328:exon4:c.C2723A:p.P908H,ENSG00000130518:ENST00000600359:exon4:c.C2585A:p.P862H	NA	NA	19p13.11	NA	NA	NA	NA	rs999813	0.54	0.54	0.558	0.551118	0.4662	0.5536	0.6037	0.6876	0.4141	0.47	0.52	0.54	0.66	0.4983	0.67	0.17	T	0.0	B	0.001	B	0.897	N	1.000	P	-0.55	N	4.03	T	-1.054	T	0.000	T	0.095	0.416	6.262	-1.61	-0.155	-0.447	1.351	0.416402	NA	0.18	0.454789	0.673182	ID=COSM438967,COSM1480790;OCCURENCE=1(breast)	0.514	NA	5.9140444
1061	1	179520660	179520660	C	G	intronic	AXDND1,NPHS2	NA	NA	NA	intronic	ENSG00000116218,ENSG00000162779	NA	NA	NA	NA	NA	1q25.2	NA	Name=MafK_(ab50322),Max,AP-2gamma,BATF,CEBPB,EBF1_(C-8),EBF,eGFP-JunD,c-Fos,STAT3	Name=94	NA	rs2274624	0.08	0.08	0.069	0.0710863	0.0865	0.0942	0.0519	0.0946	0.0133	0.09	0.08	0.05	0.08	NA	0.098	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.11149	NA	NA	NA	NA	NA	0.08	NA	5.9135
1061	5	87498849	87498849	G	A	exonic	TMEM161B	NA	synonymous SNV	TMEM161B:NM_153354:exon9:c.C844T:p.L282L	exonic	ENSG00000164180	NA	synonymous SNV	ENSG00000164180:ENST00000511218:exon5:c.C298T:p.L100L,ENSG00000164180:ENST00000506536:exon8:c.C298T:p.L100L,ENSG00000164180:ENST00000509387:exon8:c.C463T:p.L155L,ENSG00000164180:ENST00000296595:exon9:c.C844T:p.L282L,ENSG00000164180:ENST00000514135:exon9:c.C844T:p.L282L,ENSG00000164180:ENST00000512429:exon10:c.C811T:p.L271L	Score=692;Name=lod=867	NA	5q14.3	Score=888;Name=V$FREAC7_01	NA	NA	NA	rs3097146	0.52	0.52	0.483	0.48103	0.5875	0.7897	0.6095	0.1036	0.4724	0.59	0.75	0.58	0.11	0.5602	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.957073	NA	NA	0.605581	0.191784	NA	0.536	NA	5.9133856
1061	14	58838701	58838701	C	T	exonic	ARID4A	NA	synonymous SNV	ARID4A:NM_023001:exon23:c.C3561T:p.C1187C,ARID4A:NM_002892:exon24:c.C3768T:p.C1256C,ARID4A:NM_023000:exon24:c.C3606T:p.C1202C	exonic	ENSG00000032219	NA	synonymous SNV	ENSG00000032219:ENST00000431317:exon22:c.C3561T:p.C1187C,ENSG00000032219:ENST00000348476:exon23:c.C3561T:p.C1187C,ENSG00000032219:ENST00000355431:exon24:c.C3768T:p.C1256C,ENSG00000032219:ENST00000395168:exon24:c.C3606T:p.C1202C	Score=563;Name=lod=258	NA	14q23.1	Score=898;Name=V$AREB6_02	NA	NA	NA	rs1051861	0.51	0.51	0.492	0.531949	0.5915	0.4762	0.683	0.3563	0.6585	0.57	0.47	0.64	0.36	0.5737	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.320341	NA	NA	0.588605	0.391966	NA	0.558	NA	5.9128616
1061	3	156983414	156983414	T	C	exonic	VEPH1	NA	synonymous SNV	VEPH1:NM_001167911:exon12:c.A2031G:p.K677K,VEPH1:NM_001167912:exon13:c.A2166G:p.K722K,VEPH1:NM_024621:exon13:c.A2166G:p.K722K	exonic	ENSG00000197415	NA	synonymous SNV	ENSG00000197415:ENST00000392833:exon12:c.A2031G:p.K677K,ENSG00000197415:ENST00000543418:exon12:c.A2031G:p.K677K,ENSG00000197415:ENST00000362010:exon13:c.A2166G:p.K722K,ENSG00000197415:ENST00000392832:exon13:c.A2166G:p.K722K	Score=616;Name=lod=424	NA	3q25.31	NA	NA	NA	NA	rs7652298	0.26	0.26	0.223	0.233626	0.2575	0.3323	0.4712	0.0522	0.184	0.25	0.36	0.42	0.07	0.2534	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.22991	NA	NA	0.242907	0.08965	ID=COSM149504;OCCURENCE=1(stomach)	0.159	NA	5.9128596
1061	1	157029134	157029134	T	C	intergenic	ARHGEF11,ETV3L	dist=13972;dist=32701	NA	NA	ncRNA_exonic	ENSG00000237842	NA	NA	NA	Score=880;Name=lod=5040	NA	1q23.1	NA	Name=HNF4G_(SC-6558),HNF4A_(H-171),SP1,TCF4	NA	NA	rs61326781	0.05	0.05	0.058	0.0485224	0.0885	0.002	0.0288	0.0537	0.0624	0.09	0.0035	0.03	0.04	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.1677	NA	NA	NA	NA	NA	0.043	NA	5.9115
1061	3	149180009	149180009	C	G	intergenic	TM4SF1,TM4SF4	dist=84441;dist=12359	NA	NA	ncRNA_exonic	ENSG00000241929	NA	NA	NA	Score=313;Name=lod=25	NA	3q25.1	NA	NA	Name=6	NA	rs79856226	0.05	0.05	0.053	0.0457268	0.0885	0.0268	0.0836	0.0121	0.0399	0.1	0.02	0.06	0.01	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.19709	NA	NA	NA	NA	NA	0.08	NA	5.9115
1061	3	149180132	149180132	G	A	intergenic	TM4SF1,TM4SF4	dist=84564;dist=12236	NA	NA	ncRNA_exonic	ENSG00000241929	NA	NA	NA	Score=538;Name=lod=205	NA	3q25.1	NA	NA	Name=6	NA	rs78984083	0.05	0.05	0.046	0.0459265	0.0885	0.0268	0.0836	0.0129	0.0399	0.1	0.02	0.06	0.01	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.879068	NA	NA	NA	NA	NA	0.08	NA	5.9115
1061	3	149180176	149180176	G	C	intergenic	TM4SF1,TM4SF4	dist=84608;dist=12192	NA	NA	ncRNA_exonic	ENSG00000241929	NA	NA	NA	Score=538;Name=lod=205	NA	3q25.1	NA	NA	Name=6	NA	rs77152704	0.06	0.06	0.055	0.047524	0.0885	0.0268	0.0836	0.0189	0.0399	0.1	0.02	0.06	0.03	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.531855	NA	NA	NA	NA	NA	0.094	NA	5.9115
1061	11	113661422	113661422	A	G	intergenic	CLDN25,USP28	dist=10215;dist=7175	NA	NA	ncRNA_exonic	ENSG00000256167	NA	NA	NA	Score=530;Name=lod=190	NA	11q23.2	NA	Name=Pol2-4H8	NA	NA	rs1713674	0.05	0.05	0.031	0.0419329	0.0885	0.001	0.0749	0.0061	0.0613	0.1	NA	0.07	0.01	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.702642	NA	NA	NA	NA	NA	0.123	NA	5.9115
1061	9	32630472	32630472	T	C	exonic	TAF1L	NA	synonymous SNV	TAF1L:NM_153809:exon1:c.A5106G:p.K1702K	exonic	ENSG00000122728	NA	synonymous SNV	ENSG00000122728:ENST00000242310:exon1:c.A5106G:p.K1702K	Score=663;Name=lod=660	NA	9p21.1	NA	NA	NA	NA	rs10758145	0.34	0.34	0.354	0.346046	0.2435	0.3681	0.245	0.5106	0.2781	0.25	0.4	0.26	0.46	0.281	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.342279	NA	NA	0.23093	0.478212	NA	0.297	NA	5.9112366
1061	7	5036758	5036758	A	C	ncRNA_exonic	RNF216P1	NA	NA	NA	ncRNA_exonic	ENSG00000196204	NA	NA	NA	Score=470;Name=lod=108	NA	7p22.1	NA	Name=CTCF	NA	NA	rs9639895	0.77	0.77	0.789	0.742412	0.7555	0.6637	0.6859	0.8971	0.6411	0.76	0.7	0.72	0.9	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.406408	NA	NA	NA	NA	NA	0.688	NA	5.9111666
1061	2	231042276	231042276	A	G	exonic	SP110	NA	nonsynonymous SNV	SP110:NM_004509:exon14:c.T1568C:p.M523T,SP110:NM_004510:exon14:c.T1568C:p.M523T,SP110:NM_080424:exon14:c.T1568C:p.M523T,SP110:NM_001185015:exon15:c.T1586C:p.M529T	exonic	ENSG00000135899	NA	nonsynonymous SNV	ENSG00000135899:ENST00000338556:exon13:c.T674C:p.M225T,ENSG00000135899:ENST00000258381:exon14:c.T1568C:p.M523T,ENSG00000135899:ENST00000258382:exon14:c.T1568C:p.M523T,ENSG00000135899:ENST00000358662:exon14:c.T1568C:p.M523T,ENSG00000135899:ENST00000392048:exon14:c.T1562C:p.M521T,ENSG00000135899:ENST00000540870:exon15:c.T1586C:p.M529T	NA	NA	2q37.1	NA	NA	NA	NA	rs1135791	0.34	0.34	0.324	0.32488	0.496	0.1677	0.3545	0.208	0.4479	0.49	0.17	0.4	0.24	0.4256	0.5	0.42	T	0.0	B	0.0	B	0.966	N	1.000	P	-0.625	N	-0.46	T	-0.948	T	0.000	T	0.04	-0.193	3.063	-0.782	-0.498	-0.527	0.294	-0.192867	NA	0.38	0.500698	0.255107	NA	0.391	NA	5.9110354
1061	12	122611934	122611934	C	T	intronic	MLXIP	NA	NA	NA	intronic	ENSG00000175727	NA	NA	NA	NA	NA	12q24.31	NA	Name=Rad21,CTCF,CTCF_(SC-5916)	Name=24	NA	rs113864314	0.01	0.01	0.015	0.00758786	0.0268	NA	0.0086	0.0015	0.0031	0.03	NA	0.01	NA	0.0297	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.106753	NA	NA	0.032469	0.00578	NA	0.007	NA	5.911031
1061	10	123673339	123673339	T	C	exonic	ATE1	NA	synonymous SNV	ATE1:NM_001001976:exon4:c.A303G:p.L101L,ATE1:NM_007041:exon4:c.A303G:p.L101L	exonic	ENSG00000107669	NA	synonymous SNV	ENSG00000107669:ENST00000369040:exon2:c.A15G:p.L5L,ENSG00000107669:ENST00000224652:exon4:c.A303G:p.L101L,ENSG00000107669:ENST00000369043:exon4:c.A303G:p.L101L,ENSG00000107669:ENST00000455628:exon4:c.A282G:p.L94L,ENSG00000107669:ENST00000540606:exon4:c.A282G:p.L94L	Score=598;Name=lod=360	NA	10q26.13	NA	NA	NA	NA	rs10749435	0.9	0.9	0.915	0.899161	0.9245	0.9286	0.7839	0.9017	0.9213	0.92	0.93	0.85	0.9	0.903	0.95	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.041	T	0.000	T	.	1.068	9.362	2.56	0.415	0.371	1.981	1.068345	NA	NA	0.928256	0.889923	NA	0.964	NA	5.9109106
1061	8	139149406	139149406	G	A	exonic	FAM135B	NA	synonymous SNV	FAM135B:NM_015912:exon19:c.C3999T:p.L1333L	exonic	ENSG00000147724	NA	synonymous SNV	ENSG00000147724:ENST00000395297:exon19:c.C3999T:p.L1333L	Score=502;Name=lod=146	NA	8q24.23	NA	NA	NA	NA	rs6577876	0.19	0.19	0.207	0.196486	0.2575	0.0139	0.2017	0.3101	0.1646	0.24	0.01	0.24	0.29	0.2258	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.897635	NA	NA	0.272561	0.305317	NA	0.348	NA	5.9108056
1061	2	20403949	20403949	C	T	exonic	SDC1	NA	synonymous SNV	SDC1:NM_002997:exon3:c.G252A:p.E84E,SDC1:NM_001006946:exon4:c.G252A:p.E84E	exonic	ENSG00000115884	NA	synonymous SNV	ENSG00000115884:ENST00000254351:exon3:c.G252A:p.E84E,ENSG00000115884:ENST00000403076:exon3:c.G252A:p.E84E,ENSG00000115884:ENST00000429035:exon3:c.G276A:p.E92E,ENSG00000115884:ENST00000381150:exon4:c.G252A:p.E84E	NA	NA	2p24.1	NA	NA	Name=2	NA	rs2230924	0.2	0.2	0.203	0.173922	0.2634	0.0843	0.2421	0.1513	0.1564	0.27	0.09	0.28	0.16	0.2242	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.036761	NA	NA	0.268318	0.169088	NA	0.174	NA	5.9107486
1061	5	52502644	52502644	G	A	intergenic	LOC257396,FST	dist=91692;dist=273620	NA	NA	ncRNA_exonic	ENSG00000213940	NA	NA	NA	Score=721;Name=lod=1130	NA	5q11.2	NA	NA	Name=2	NA	rs251513	0.13	0.13	0.097	0.119209	0.0895	0.2282	0.1369	0.0408	0.1309	0.08	0.27	0.11	0.04	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.556319	NA	NA	NA	NA	NA	0.152	NA	5.9105
1061	14	23939432	23939432	G	A	intronic	NGDN	NA	NA	NA	intronic	ENSG00000129460	NA	NA	NA	NA	NA	14q11.2	NA	Name=JunD,c-Jun	Name=2	NA	rs2295705	0.14	0.14	0.124	0.127596	0.0895	0.2331	0.2017	0.0446	0.1176	0.1	0.23	0.19	0.04	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.087885	NA	NA	NA	NA	NA	0.072	NA	5.9105
1061	8	22974325	22974325	G	A	exonic	TNFRSF10C	NA	synonymous SNV	TNFRSF10C:NM_003841:exon5:c.G561A:p.P187P	exonic	ENSG00000173535	NA	synonymous SNV	ENSG00000173535:ENST00000540813:exon4:c.G255A:p.P85P,ENSG00000173535:ENST00000356864:exon5:c.G561A:p.P187P	Score=278;Name=lod=18	NA	8p21.3	NA	NA	NA	NA	rs11780493	0.62	0.62	0.69	NA	NA	NA	NA	NA	NA	0.67	0.67	0.71	0.44	0.7562	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.386602	NA	NA	NA	NA	NA	NA	NA	5.9104666
1061	1	43636484	43636484	C	G	exonic	EBNA1BP2	NA	synonymous SNV	EBNA1BP2:NM_006824:exon4:c.G390C:p.T130T,EBNA1BP2:NM_001159936:exon5:c.G555C:p.T185T	exonic	ENSG00000117395	NA	synonymous SNV	ENSG00000117395:ENST00000236051:exon4:c.G390C:p.T130T,ENSG00000117395:ENST00000431635:exon5:c.G555C:p.T185T	Score=469;Name=lod=107	NA	1p34.2	NA	NA	NA	NA	rs1049276	0.17	0.17	0.158	0.140775	0.2883	NA	0.1513	0.1278	0.1442	0.31	NA	0.19	0.13	0.2106	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.782388	NA	NA	0.257674	0.119383	NA	0.304	NA	5.9100926
1061	15	78789488	78789488	C	T	exonic	IREB2	NA	synonymous SNV	IREB2:NM_004136:exon21:c.C2616T:p.A872A	exonic	ENSG00000136381	NA	synonymous SNV	ENSG00000136381:ENST00000258886:exon21:c.C2616T:p.A872A	Score=642;Name=lod=543	Name=Chronic obstructive pulmonary disease	15q25.1	NA	NA	NA	NA	rs13180	0.48	0.48	0.447	0.43111	0.6004	0.4633	0.451	0.2375	0.4714	0.61	0.48	0.52	0.25	0.5439	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.080952	NA	NA	0.612276	0.314891	NA	0.514	NA	5.9100906
1061	11	60543367	60543367	C	G	UTR3	MS4A15	NM_001098835:c.*179C>G,NM_152717:c.*179C>G	NA	NA	UTR3	ENSG00000166961	ENST00000337911:c.*179C>G,ENST00000429322:c.*625C>G,ENST00000405633:c.*179C>G	NA	NA	NA	NA	11q12.2	NA	Name=EBF1_(C-8),EBF	Name=15	NA	rs17628721	0.26	0.26	0.265	0.267971	0.4235	0.1171	0.2536	0.2345	0.319	0.42	0.1	0.25	0.2	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.024623	NA	NA	NA	NA	NA	0.239	NA	5.9098334
1061	19	41932084	41932084	G	T	exonic	B3GNT8	NA	synonymous SNV	B3GNT8:NM_198540:exon3:c.C600A:p.A200A	exonic	ENSG00000177191	NA	synonymous SNV	ENSG00000177191:ENST00000321702:exon3:c.C600A:p.A200A	Score=405;Name=lod=59	NA	19q13.2	Score=867;Name=V$IK1_01	NA	NA	NA	rs284660	0.5	0.5	0.49	0.491014	0.5865	0.4306	0.4467	0.41	0.5961	0.58	0.46	0.52	0.4	0.563	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.443311	1.443311	NA	0.607558	0.441217	NA	0.246	NA	5.9096086
1061	11	5411239	5411239	T	C	exonic	OR51M1	NA	nonsynonymous SNV	OR51M1:NM_001004756:exon1:c.T611C:p.I204T	exonic	ENSG00000184698	NA	nonsynonymous SNV	ENSG00000184698:ENST00000328611:exon1:c.T611C:p.I204T	NA	NA	11p15.4	NA	NA	NA	NA	rs1498469	0.7	0.7	0.702	0.714457	0.8231	0.5476	0.7349	0.7383	0.728	0.81	0.54	0.75	0.7	0.7729	0.83	1	T	.	.	.	.	0.003	N	0.789	P	.	.	9.05	T	-1.027	T	0.000	T	0.022	-1.761	0.01	4.34	0.782	-0.611	9.343	-1.760733	NA	1	0.827894	0.784585	NA	0.71	NA	5.9094394
1061	12	133352907	133352907	T	C	intronic	GOLGA3	NA	NA	NA	intronic	ENSG00000090615	NA	NA	NA	Score=487;Name=lod=127	NA	12q24.33	NA	NA	Name=2	NA	rs56366280	NA	NA	0.1	0.171725	0.0915	0.3373	0.2017	0.1543	0.0859	NA	NA	NA	NA	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.007466	NA	NA	NA	NA	NA	0.014	NA	5.9085
1061	16	817481	817481	C	T	intronic	MSLN	NA	NA	NA	intronic	ENSG00000102854	NA	NA	NA	NA	NA	16p13.3	NA	Name=MafF_(M8194),MafK_(SC-477),MafK_(ab50322),ZBTB7A_(SC-34508)	Name=2	NA	rs142937997	0.02	0.02	0.022	0.0123802	0.0368	0.004	0.0259	0.0015	0.001	0.03	NA	0.03	0.01	0.0206	0.034	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.51644	NA	NA	0.034189	0.006874	NA	0.007	NA	5.908411
1061	4	69727258	69727258	G	C	intergenic	UGT2B10,UGT2A3	dist=29517;dist=66919	NA	NA	ncRNA_exonic	ENSG00000249235	NA	NA	NA	Score=259;Name=lod=15	NA	4q13.2	Score=853;Name=V$MRF2_01	NA	NA	NA	rs79226128	0.13	0.13	0.12	0.114217	0.0924	0.1756	0.0836	0.1407	0.0593	0.11	0.17	0.09	0.13	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.04206	NA	NA	NA	NA	NA	0.159	NA	5.9076
1061	10	50916542	50916542	C	T	exonic	C10orf53	NA	nonsynonymous SNV	C10orf53:NM_182554:exon3:c.C353T:p.T118I	exonic	ENSG00000178645	NA	nonsynonymous SNV	ENSG00000178645:ENST00000374112:exon3:c.C353T:p.T118I,ENSG00000178645:ENST00000535836:exon3:c.C353T:p.T118I	NA	NA	10q11.23	NA	NA	NA	NA	rs4838554	0.38	0.38	0.389	0.390974	0.495	0.1548	0.4611	0.4365	0.4162	0.5	0.14	0.42	0.45	0.4481	0.5	0.63	T	0.0	B	0.0	B	.	.	1.000	P	0	N	.	.	-0.917	T	0.000	T	0.029	-2.455	0.003	-0.507	-0.926	-0.916	4.466	-2.454822	NA	0.68	0.482674	0.452792	NA	0.413	NA	5.9075594
1061	19	17111297	17111297	A	G	exonic	CPAMD8	NA	nonsynonymous SNV	CPAMD8:NM_015692:exon10:c.T935C:p.M312T	exonic	ENSG00000160111	NA	nonsynonymous SNV	ENSG00000160111:ENST00000291440:exon10:c.T935C:p.M312T,ENSG00000160111:ENST00000388925:exon10:c.T794C:p.M265T,ENSG00000160111:ENST00000443236:exon10:c.T935C:p.M312T	NA	NA	19p13.11	NA	NA	NA	NA	rs4808551	0.74	0.74	0.743	0.748403	0.832	0.6845	0.7824	0.8253	0.6002	0.8	0.62	0.78	0.76	0.7788	0.83	0.86	T	0.0	B	0.0	B	0.379	N	1.000	P	-1.725	N	0.94	T	-1.003	T	0.000	T	0.18	-3.651	0.001	-2.0	-0.520	0.738	9.757	-3.651325	NA	0.89	0.815681	0.832817	NA	0.739	NA	5.9068524
1061	11	110035262	110035262	A	G	exonic	ZC3H12C	NA	synonymous SNV	ZC3H12C:NM_033390:exon6:c.A1452G:p.R484R	exonic	ENSG00000149289	NA	synonymous SNV	ENSG00000149289:ENST00000453089:exon5:c.A1359G:p.R453R,ENSG00000149289:ENST00000278590:exon6:c.A1452G:p.R484R,ENSG00000149289:ENST00000528673:exon6:c.A1455G:p.R485R	Score=479;Name=lod=118	NA	11q22.3	NA	NA	NA	NA	rs1026608	0.25	0.25	0.246	0.220248	0.2724	0.2004	0.2161	0.2186	0.1922	0.26	0.22	0.25	0.25	0.2357	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.696169	NA	NA	0.252175	0.208851	NA	0.246	NA	5.9063916
1061	20	47713063	47713063	C	T	UTR3	CSE1L	NM_001316:c.*88C>T,NM_001256135:c.*88C>T	NA	NA	UTR3	ENSG00000124207	ENST00000262982:c.*88C>T,ENST00000542325:c.*88C>T	NA	NA	Score=259;Name=lod=15	NA	20q13.13	NA	NA	Name=10	NA	rs17632	0.36	0.36	0.348	0.363019	0.4274	0.3304	0.3732	0.3359	0.3599	0.43	0.29	0.4	0.31	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.890723	1.890723	NA	NA	NA	NA	0.326	NA	5.9059334
1061	5	179260528	179260528	T	C	intronic	SQSTM1	NA	NA	NA	intronic	ENSG00000161011	NA	NA	NA	NA	NA	5q35.3	NA	Name=Pol2	Name=7	NA	rs155788	0.19	0.19	0.186	0.192492	0.0944	0.1101	0.1585	0.4599	0.0409	0.08	0.12	0.17	0.44	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.357252	NA	NA	NA	NA	NA	0.283	NA	5.9056
1061	6	145156780	145156780	G	C	intronic	UTRN	NA	NA	NA	intronic	ENSG00000152818	NA	NA	NA	NA	NA	6q24.2	NA	Name=MafK_(ab50322),MafF_(M8194),MafK_(SC-477)	Name=7	NA	rs9403616	0.2	0.2	0.209	0.205471	0.0944	0.4514	0.1196	0.1067	0.2607	0.11	0.45	0.13	0.13	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.681754	NA	NA	NA	NA	NA	0.094	NA	5.9056
1061	17	77078871	77078871	C	A	intronic	ENGASE	NA	NA	NA	UTR3	ENSG00000167280	ENST00000300682:c.*543C>A	NA	NA	NA	NA	17q25.3	NA	Name=TCF12,CTCF_(C-20),CTCF_(SC-5916),CTCF,Rad21,SMC3_(ab9263),HMGN3,GABP,Znf143_(16618-1-AP),CTCFL_(SC-98982)	Name=60	NA	rs74001528	0.11	0.11	0.089	0.123003	0.1054	0.0387	0.1715	0.1611	0.1421	0.11	0.04	0.15	0.15	0.1562	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.363405	NA	NA	NA	NA	NA	0.152	NA	5.9050667
1062	4	189065128	189065128	T	C	intronic	TRIML1	NA	NA	NA	intronic	ENSG00000184108	NA	NA	NA	NA	NA	4q35.2	NA	Name=NRSF	Name=3	NA	rs61075538	0.18	0.18	0.168	0.176518	0.0954	0.246	0.1066	0.2564	0.1299	0.09	0.26	0.13	0.25	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.971546	NA	NA	NA	NA	ID=COSN167394;OCCURENCE=1(large_intestine)	0.174	NA	5.9046
1062	12	94534382	94534382	G	A	intergenic	CRADD,PLXNC1	dist=289851;dist=8117	NA	NA	ncRNA_exonic	ENSG00000257360	NA	NA	NA	Score=706;Name=lod=988	NA	12q22	NA	Name=CTCF	NA	NA	rs11107416	0.05	0.05	0.044	0.0517173	0.0954	0.0238	0.049	0.0053	0.1002	0.1	0.02	0.06	0.01	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.330975	NA	NA	NA	NA	NA	0.08	NA	5.9046
1062	19	23433107	23433107	G	C	ncRNA_exonic	ZNF724P	NA	NA	NA	UTR5	ENSG00000196081	ENST00000418100:c.-63C>G,ENST00000597537:c.-18027C>G,ENST00000597037:c.-63C>G	NA	NA	NA	NA	19p12	NA	Name=ELF1_(SC-631),CHD2_(N-1250),NF-YA,TAF1,GABP,Pol2,TAF7_(SQ-8),HEY1,TBP,Pol2-4H8,HA-E2F1,Sin3Ak-20	Name=146	NA	rs10405424	0.56	0.56	0.535	0.541134	0.5954	0.6627	0.6412	0.329	0.5757	0.62	0.67	0.6	0.33	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.349416	NA	NA	NA	NA	NA	0.449	NA	5.9046
1062	19	33584491	33584491	C	T	intronic	GPATCH1	NA	NA	NA	intronic	ENSG00000076650	NA	NA	NA	NA	NA	19q13.11	NA	Name=eGFP-GATA2,eGFP-JunD	Name=2	NA	rs12460349	0.19	0.19	0.192	0.257987	0.0954	0.1687	0.1297	0.4486	0.3507	0.09	0.14	0.14	0.42	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.676858	NA	NA	NA	NA	NA	0.188	NA	5.9046
1062	1	47571905	47571905	C	T	exonic	CYP4Z1	NA	synonymous SNV	CYP4Z1:NM_178134:exon9:c.C1173T:p.T391T	exonic	ENSG00000186160	NA	synonymous SNV	ENSG00000186160:ENST00000334194:exon9:c.C1173T:p.T391T	Score=431;Name=lod=75	NA	1p33	NA	NA	NA	NA	rs28463559	0.51	0.51	0.471	0.579473	0.339	0.9563	0.4654	0.4766	0.6585	0.31	0.9	0.38	0.45	0.4241	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.698416	1.698416	NA	NA	NA	NA	0.406	NA	5.9035666
1062	11	11373960	11373960	C	T	exonic	CSNK2A3	NA	nonsynonymous SNV	CSNK2A3:NM_001256686:exon1:c.G707A:p.R236H	exonic	ENSG00000254598	NA	nonsynonymous SNV	ENSG00000254598:ENST00000528848:exon1:c.G707A:p.R236H	Score=734;Name=lod=1283	NA	11p15.3	NA	NA	NA	NA	rs2071461	0.64	0.64	0.634	0.625	0.7256	0.6607	0.6326	0.4123	0.7669	0.72	0.69	0.68	0.44	0.7044	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.397846	NA	NA	NA	NA	NA	0.507	NA	5.9033334
1062	14	72939735	72939735	C	T	intronic	RGS6	NA	NA	NA	intronic	ENSG00000182732	NA	NA	NA	NA	NA	14q24.2	NA	Name=CTCF	Name=12	NA	rs10131497	0.12	0.12	0.111	0.141973	0.0974	0.1349	0.1614	0.1377	0.1871	0.1	0.1	0.16	0.13	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.061722	NA	NA	NA	NA	NA	0.167	NA	5.9026
1062	6	150390213	150390213	G	A	upstream	ULBP3	NA	NA	NA	UTR5	ENSG00000131019	ENST00000367339:c.-11C>T	NA	NA	NA	NA	6q25.1	NA	Name=ZBTB33,JunD,TAF1,BRCA1_(C-1863),YY1_(C-20),Pol2-4H8,E2F6,SP1,Pol2,c-Myc,TBP,CHD2_(N-1250)	Name=140	NA	rs139986011	0.02	0.02	0.003	0.0139776	0.0388	NA	0.0202	0.0015	0.0153	0.04	NA	0.02	NA	0.0274	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.086349	NA	NA	0.031912	0.005682	NA	0.014	NA	5.901888
1062	2	215865575	215865575	T	C	exonic	ABCA12	NA	synonymous SNV	ABCA12:NM_015657:exon14:c.A2079G:p.P693P,ABCA12:NM_173076:exon22:c.A3033G:p.P1011P	exonic	ENSG00000144452	NA	synonymous SNV	ENSG00000144452:ENST00000389661:exon14:c.A2079G:p.P693P,ENSG00000144452:ENST00000272895:exon22:c.A3033G:p.P1011P	Score=538;Name=lod=205	NA	2q35	NA	NA	NA	NA	rs10498030	0.22	0.22	0.198	0.195487	0.2773	0.3433	0.1945	0.0174	0.2004	0.28	0.34	0.2	0.03	0.2331	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.879871	NA	NA	0.254767	0.050159	NA	0.21	NA	5.9014996
1062	1	1849529	1849529	A	G	exonic	TMEM52	NA	nonsynonymous SNV	TMEM52:NM_178545:exon5:c.T422C:p.M141T	exonic	ENSG00000178821	NA	nonsynonymous SNV	ENSG00000178821:ENST00000378602:exon2:c.T377C:p.M126T,ENSG00000178821:ENST00000310991:exon5:c.T422C:p.M141T	NA	NA	1p36.33	NA	NA	NA	NA	rs28640257	0.39	0.39	0.326	0.352037	0.4901	0.4623	0.5072	0.053	0.3906	0.49	0.45	0.51	0.07	0.4434	0.51	0.52	T	0.01	B	0.008	B	0.012	N	1.000	P	0.55	N	1.49	T	-0.913	T	0.000	T	0.05	-0.081	3.602	0.201	0.143	0.105	3.361	-0.081358	NA	0.17	0.498605	0.120744	ID=COSM146377;OCCURENCE=1(breast),1(stomach)	0.261	NA	5.9012284
1062	15	43017426	43017426	T	G	exonic	CDAN1	NA	synonymous SNV	CDAN1:NM_138477:exon27:c.A3474C:p.L1158L	exonic	ENSG00000140326	NA	synonymous SNV	ENSG00000140326:ENST00000356231:exon27:c.A3474C:p.L1158L	Score=533;Name=lod=196	NA	15q15.2	NA	NA	NA	NA	rs16957091	0.4	0.4	0.438	0.461462	0.2346	0.254	0.1916	0.9554	0.4325	0.24	0.25	0.2	0.95	0.3038	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.243097	1.243097	NA	0.227378	0.826146	NA	0.428	NA	5.9008886
1062	5	6632875	6632875	G	A	intronic	NSUN2	NA	NA	NA	intronic	ENSG00000037474	NA	NA	NA	NA	NA	5p15.31	NA	Name=AP-2gamma,CTCF,AP-2alpha	Name=28	NA	rs10076470	0.31	0.31	0.281	0.276757	0.3936	0.1567	0.389	0.2852	0.1892	0.38	0.15	0.42	0.31	0.3325	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.067734	NA	NA	0.373023	0.300045	NA	0.442	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117862.2;CLNDSDB=.;CLNDSDBID=.	5.900877
1062	17	2606715	2606715	G	A	exonic	CLUH	NA	synonymous SNV	CLUH:NM_015229:exon3:c.C258T:p.R86R	exonic	ENSG00000132361	NA	synonymous SNV	ENSG00000132361:ENST00000575014:exon1:c.C54T:p.R18R,ENSG00000132361:ENST00000538975:exon2:c.C258T:p.R86R,ENSG00000132361:ENST00000435359:exon3:c.C258T:p.R86R,ENSG00000132361:ENST00000570628:exon3:c.C258T:p.R86R,ENSG00000132361:ENST00000572414:exon3:c.C372T:p.R124R,ENSG00000132361:ENST00000574426:exon3:c.C372T:p.R124R,ENSG00000132361:ENST00000576309:exon3:c.C258T:p.R86R,ENSG00000132361:ENST00000576885:exon3:c.C258T:p.R86R	Score=519;Name=lod=171	NA	17p13.3	NA	NA	Name=2	NA	rs1065479	0.51	0.51	0.491	0.488818	0.5696	0.5248	0.6354	0.2882	0.5358	0.57	0.55	0.62	0.27	0.5735	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.552906	1.552906	NA	0.622803	0.341379	NA	0.471	NA	5.9007636
1062	2	192701393	192701393	A	G	exonic	SDPR	NA	synonymous SNV	SDPR:NM_004657:exon2:c.T534C:p.G178G	exonic	ENSG00000168497	NA	synonymous SNV	ENSG00000168497:ENST00000304141:exon2:c.T534C:p.G178G	Score=243;Name=lod=13	NA	2q32.3	NA	NA	Name=21	NA	rs10167187	0.62	0.62	0.586	0.633786	0.5795	0.7609	0.6686	0.5121	0.6984	0.57	0.75	0.64	0.53	0.6054	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.806702	NA	NA	0.581065	0.505901	NA	0.507	NA	5.9007016
1062	11	12225946	12225946	T	G	exonic	MICAL2	NA	synonymous SNV	MICAL2:NM_014632:exon4:c.T414G:p.R138R	exonic	ENSG00000133816	NA	synonymous SNV	ENSG00000133816:ENST00000379612:exon2:c.T414G:p.R138R,ENSG00000133816:ENST00000342902:exon3:c.T414G:p.R138R,ENSG00000133816:ENST00000527546:exon3:c.T414G:p.R138R,ENSG00000133816:ENST00000256194:exon4:c.T414G:p.R138R,ENSG00000133816:ENST00000537344:exon4:c.T414G:p.R138R	Score=719;Name=lod=1117	NA	11p15.3	Score=895;Name=V$NF1_Q6	NA	NA	NA	rs3763823	0.69	0.69	0.676	0.701078	0.5905	0.6508	0.7089	0.8911	0.6043	0.58	0.67	0.7	0.89	0.6161	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.608765	1.608765	NA	0.559385	0.836665	ID=COSM1352045;OCCURENCE=1(large_intestine)	0.688	NA	5.9006816
1062	17	46988044	46988044	G	A	intronic	UBE2Z	NA	NA	NA	UTR5	ENSG00000159202	ENST00000511373:c.-133G>A	NA	NA	Score=389;Name=lod=51	NA	17q21.32	NA	NA	Name=16	NA	rs999475	0.24	0.24	0.217	0.234225	0.2664	0.1746	0.4078	0.1974	0.1892	0.26	0.16	0.4	0.2	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.743623	3.743623	NA	NA	NA	NA	0.333	NA	5.9002667
1062	19	10102375	10102375	G	C	intronic	COL5A3	NA	NA	NA	intronic	ENSG00000080573	NA	NA	NA	NA	NA	19p13.2	NA	Name=EBF1_(C-8),EBF,PAX5-C20	Name=2	NA	rs10411233	0.06	0.06	0.052	0.0561102	0.0278	0.0377	0.0562	0.1286	0.0061	0.03	0.04	0.05	0.12	0.0396	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.60149	NA	NA	0.032442	0.110077	NA	0.116	NA	5.900158
1062	18	5410574	5410574	A	G	exonic	EPB41L3	NA	synonymous SNV	EPB41L3:NM_012307:exon14:c.T2112C:p.T704T	exonic	ENSG00000082397	NA	synonymous SNV	ENSG00000082397:ENST00000400111:exon13:c.T1605C:p.T535T,ENSG00000082397:ENST00000540638:exon13:c.T1605C:p.T535T,ENSG00000082397:ENST00000544123:exon13:c.T1605C:p.T535T,ENSG00000082397:ENST00000341928:exon14:c.T2112C:p.T704T,ENSG00000082397:ENST00000342933:exon14:c.T2112C:p.T704T	Score=477;Name=lod=116	NA	18p11.31	Score=690;Name=V$BRACH_01	NA	NA	NA	rs3817466	0.76	0.76	NA	0.711661	0.9135	0.9177	0.8156	0.2791	0.8027	0.92	0.91	0.83	0.28	0.8531	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.820529	NA	NA	NA	NA	NA	0.674	NA	5.9000666
1062	6	109786980	109786980	T	C	UTR3	ZBTB24	NM_014797:c.*74A>G	NA	NA	UTR5;UTR3	ENSG00000135596;ENSG00000112365	ENST00000368952:c.-100A>G;ENST00000230122:c.*74A>G	NA	NA	NA	NA	6q21	NA	Name=c-Myc	Name=9	NA	rs3734652	0.55	0.55	0.554	0.5627	0.4334	0.498	0.4928	0.7542	0.5532	0.44	0.56	0.49	0.75	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.815859	1.815859	NA	NA	NA	NA	0.507	NA	5.8999334
1062	1	145112485	145112485	C	T	exonic	SEC22B	NA	unknown	UNKNOWN	ncRNA_exonic	ENSG00000223380	NA	NA	NA	Score=698;Name=lod=912	NA	1q21.1	NA	NA	Name=5	NA	rs2794039	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4995	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.906022	2.906022	NA	0.433993	0.400189	NA	0.13	NA	5.8998403
1062	8	55541617	55541617	A	G	exonic	RP1	NA	synonymous SNV	RP1:NM_006269:exon4:c.A5175G:p.Q1725Q	exonic	ENSG00000104237	NA	synonymous SNV	ENSG00000104237:ENST00000220676:exon4:c.A5175G:p.Q1725Q	NA	NA	8q12.1	NA	NA	NA	NA	rs441800	0.26	0.26	0.261	0.240815	0.2604	0.4415	0.2709	0.056	0.2423	0.25	0.44	0.24	0.09	0.2511	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.728848	NA	NA	0.255814	0.091693	NA	0.145	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000081374.1;CLNDSDB=.;CLNDSDBID=.	5.8993526
1062	11	110035301	110035301	A	G	exonic	ZC3H12C	NA	synonymous SNV	ZC3H12C:NM_033390:exon6:c.A1491G:p.T497T	exonic	ENSG00000149289	NA	synonymous SNV	ENSG00000149289:ENST00000453089:exon5:c.A1398G:p.T466T,ENSG00000149289:ENST00000278590:exon6:c.A1491G:p.T497T,ENSG00000149289:ENST00000528673:exon6:c.A1494G:p.T498T	Score=726;Name=lod=1188	NA	11q22.3	NA	NA	NA	NA	rs1026607	0.27	0.27	0.279	0.24401	0.2724	0.2004	0.2248	0.3041	0.1922	0.26	0.22	0.25	0.34	0.2426	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.406689	NA	NA	0.25291	0.286236	NA	0.297	NA	5.8987566
1062	1	20980922	20980922	G	A	intronic	DDOST	NA	NA	NA	intronic	ENSG00000244038	NA	NA	NA	NA	NA	1p36.12	NA	Name=CTCF_(SC-5916),Rad21,CTCF	Name=15	NA	rs2070658	0.11	0.11	0.089	0.105431	0.1014	0.1736	0.17	0.0106	0.1217	0.11	0.17	0.13	0.02	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.383797	NA	NA	NA	NA	NA	0.094	NA	5.8986
1062	3	197409542	197409542	T	C	intronic	KIAA0226	NA	NA	NA	intronic	ENSG00000145016	NA	NA	NA	Score=278;Name=lod=18	NA	3q29	Score=852;Name=V$TAL1BETAE47_01	NA	NA	NA	rs75643488	0.09	0.09	0.075	0.0848642	0.1024	0.0308	0.0504	0.1195	0.1002	0.11	0.05	0.05	0.13	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.390656	1.390656	NA	NA	NA	NA	0.145	NA	5.8976
1062	14	81712844	81712844	C	G	intergenic	GTF2A1,STON2	dist=25269;dist=14150	NA	NA	ncRNA_exonic	ENSG00000205579	NA	NA	NA	Score=565;Name=lod=263	NA	14q31.1	NA	NA	Name=32	NA	rs12891586	0.07	0.07	0.072	0.0688898	0.1024	0.0099	0.0663	0.0938	0.0634	0.12	0.01	0.08	0.09	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.791908	NA	0.21	NA	NA	NA	0.043	NA	5.8976
1062	2	201994540	201994540	C	T	UTR5	CFLAR	NM_003879:c.-49C>T,NM_001202516:c.-49C>T,NM_001127184:c.-49C>T,NM_001127183:c.-49C>T	NA	NA	UTR5	ENSG00000003402	ENST00000309955:c.-49C>T,ENST00000340870:c.-49C>T,ENST00000355558:c.-49C>T,ENST00000341222:c.-49C>T,ENST00000341582:c.-49C>T,ENST00000342795:c.-49C>T,ENST00000395148:c.-49C>T,ENST00000441224:c.-49C>T,ENST00000433445:c.-49C>T,ENST00000423241:c.-49C>T,ENST00000439154:c.-49C>T,ENST00000425030:c.-49C>T,ENST00000417748:c.-49C>T,ENST00000440180:c.-49C>T	NA	NA	NA	NA	2q33.1	NA	Name=TAF1,YY1,Pol2,Pol2-4H8,NFKB,TBP	Name=85	NA	rs10931931	0.17	0.17	0.201	0.173123	0.1561	0.0139	0.1412	0.4297	0.0307	0.16	0.0035	0.15	0.4	0.1329	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.511095	NA	NA	0.147442	0.350885	NA	0.181	NA	5.8968914
1062	15	31108789	31108789	C	T	intergenic	LOC100288637,HERC2P10	dist=43580;dist=1450	NA	NA	ncRNA_exonic	ENSG00000259845	NA	NA	NA	Score=620;Name=lod=442	NA	15q13.2	Score=971;Name=V$MYOD_01	NA	NA	NA	rs11070619	0.11	0.11	0.101	0.11861	0.1034	0.0248	0.0807	0.2428	0.09	0.1	0.03	0.1	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.240382	NA	NA	NA	NA	NA	0.043	NA	5.8966
1062	6	157744588	157744588	C	G	UTR5	TMEM242	NM_018452:c.-57G>C	NA	NA	UTR5	ENSG00000215712	ENST00000400788:c.-57G>C,ENST00000367144:c.-57G>C	NA	NA	NA	NA	6q25.3	NA	Name=Sin3Ak-20,HA-E2F1,Pol2-4H8,ZNF263,HDAC2_(SC-6296),KAP1,RFX5_(N-494),Egr-1,YY1,ELK4,ZZZ3,HNF4A_(H-171),FOXA1_(C-20),FOSL2,JunD,Pol2(b),TBP,IRF1,TCF12,USF-1,GTF2B,THAP1_(SC-98174),PAX5-N19,PAX5-C20,SIX5,SRF,c-Myc,CCNT2,NFKB,HEY1,ZEB1_(SC-25388),BCL3,BCLAF1_(M33-P5B11),TAF7_(SQ-8),YY1_(C-20),TR4,USF1_(SC-8983),IRF4_(M-17),eGFP-JunD,GATA3_(SC-268),MEF2A,SP1,NRSF,Pol2,MEF2C_(SC-13268),TCF4,Pol2(phosphoS2),POU2F2,E2F4,WHIP,ZBTB33,HMGN3,GABP,E2F6_(H-50),ETS1,TAF1,GATA-1,Znf143_(16618-1-AP),CTCFL_(SC-98982),MafK_(SC-477),CHD2_(N-1250),GTF2F1_(RAP-74),RXRA,CEBPB,CTCF,p300,EBF1_(C-8),HNF4G_(SC-6558),Oct-2,STAT1,Max,GR,Rad21,ELF1_(SC-631),FOXA1_(SC-101058)	Name=148	NA	rs4708868	0.33	0.33	0.318	0.327276	0.2197	0.5456	0.353	0.2632	0.2812	0.22	0.58	0.33	0.22	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.477475	NA	NA	0.217473	0.273121	NA	0.254	NA	5.8961604
1062	16	66432424	66432424	C	T	exonic	CDH5	NA	synonymous SNV	CDH5:NM_001795:exon10:c.C1551T:p.I517I	exonic	ENSG00000179776	NA	synonymous SNV	ENSG00000179776:ENST00000341529:exon10:c.C1551T:p.I517I	Score=329;Name=lod=29	NA	16q21	NA	NA	NA	NA	rs3826229	NA	NA	0.01	0.415136	0.3678	0.5506	0.4409	0.3979	0.3292	NA	NA	NA	NA	0.3897	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.606918	NA	NA	0.013023	0.021808	ID=COSM1378765;OCCURENCE=1(large_intestine)	NA	NA	5.8961436
1063	6	53519857	53519857	G	A	exonic	KLHL31	NA	synonymous SNV	KLHL31:NM_001003760:exon2:c.C214T:p.L72L	exonic	ENSG00000124743	NA	synonymous SNV	ENSG00000124743:ENST00000407079:exon1:c.C214T:p.L72L,ENSG00000124743:ENST00000370905:exon2:c.C214T:p.L72L	Score=603;Name=lod=377	NA	6p12.1	NA	NA	Name=8	NA	rs12210809	0.5	0.5	0.459	0.490415	0.5924	0.5982	0.6729	0.1694	0.5787	0.57	0.6	0.65	0.17	0.5738	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.250602	NA	NA	0.606279	0.235588	NA	0.522	NA	5.8941876
1063	12	56115778	56115778	C	A	ncRNA_intronic	BLOC1S1-RDH5	NA	NA	NA	UTR3	ENSG00000258311	ENST00000550412:c.*288C>A,ENST00000551946:c.*419C>A	NA	NA	NA	NA	12q13.2	NA	Name=Pol2	Name=4	NA	rs3138141	0.11	0.11	0.098	0.153554	0.1918	0.119	0.1066	0.0098	0.3773	0.2	0.08	0.1	0.02	0.2025	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.694116	1.694116	NA	0.212674	0.048797	NA	0.065	NA	5.893026
1063	10	99141484	99141484	C	T	exonic	RRP12	NA	synonymous SNV	RRP12:NM_001145114:exon9:c.G1125A:p.T375T,RRP12:NM_015179:exon11:c.G1308A:p.T436T	exonic	ENSG00000052749	NA	synonymous SNV	ENSG00000052749:ENST00000536831:exon5:c.G462A:p.T154T,ENSG00000052749:ENST00000315563:exon8:c.G1008A:p.T336T,ENSG00000052749:ENST00000414986:exon9:c.G1125A:p.T375T,ENSG00000052749:ENST00000370992:exon11:c.G1308A:p.T436T	Score=462;Name=lod=101	NA	10q24.1	NA	NA	NA	NA	rs12218483	0.24	0.24	0.233	0.26278	0.2604	0.3125	0.2579	0.1377	0.3865	0.26	0.28	0.25	0.14	0.2599	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.397507	NA	NA	0.253372	0.15025	ID=COSM1350177;OCCURENCE=6(large_intestine)	0.174	NA	5.8929946
1063	1	247611459	247611459	G	A	intronic	NLRP3	NA	NA	NA	intronic	ENSG00000162711	NA	NA	NA	NA	NA	1q44	NA	Name=SIX5,HEY1,Pol2-4H8,TAF7_(SQ-8),YY1_(C-20),YY1,Pol2,E2F6_(H-50),TAF1	Name=116	NA	rs11577509	0.14	0.14	0.138	0.135783	0.1074	0.0506	0.1167	0.2481	0.1145	0.1	0.05	0.15	0.27	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.019637	NA	NA	NA	NA	NA	NA	NA	5.8926
1063	1	247611460	247611460	G	C	intronic	NLRP3	NA	NA	NA	intronic	ENSG00000162711	NA	NA	NA	NA	NA	1q44	NA	Name=SIX5,HEY1,Pol2-4H8,TAF7_(SQ-8),YY1_(C-20),YY1,Pol2,E2F6_(H-50),TAF1	Name=116	NA	rs11577510	0.14	0.14	0.134	0.136182	0.1074	0.0506	0.1167	0.2489	0.1155	0.1	0.05	0.15	0.27	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.065154	NA	NA	NA	NA	NA	NA	NA	5.8926
1063	17	43226478	43226478	C	T	UTR5	HEXIM1	NM_006460:c.-80C>T	NA	NA	UTR5	ENSG00000186834	ENST00000332499:c.-80C>T	NA	NA	NA	NA	17q21.31	NA	Name=AP-2gamma	Name=8	NA	rs7216041	NA	NA	NA	0.519369	0.4414	0.5149	0.4928	0.6649	0.4264	NA	NA	NA	NA	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-3.323459	NA	NA	NA	NA	NA	0.246	NA	5.8919334
1063	12	124387586	124387586	A	G	exonic	DNAH10	NA	synonymous SNV	DNAH10:NM_207437:exon56:c.A9387G:p.A3129A	exonic	ENSG00000197653	NA	synonymous SNV	ENSG00000197653:ENST00000409039:exon56:c.A9387G:p.A3129A	NA	NA	12q24.31	Score=713;Name=V$NRSF_01	NA	NA	NA	rs61587964	0.35	0.35	0.343	0.358027	0.2515	0.2788	0.2968	0.6135	0.2474	0.27	0.28	0.3	0.59	0.3009	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.663971	NA	NA	0.222538	0.522846	NA	0.333	NA	5.8917286
1063	10	126556186	126556186	A	G	intergenic	FAM175B,ZRANB1	dist=30947;dist=74506	NA	NA	ncRNA_exonic	ENSG00000214807	NA	NA	NA	Score=563;Name=lod=260	NA	10q26.13	NA	Name=Rad21	NA	NA	rs10901830	0.08	0.08	0.081	0.0700879	0.1083	NA	0.072	0.1248	0.0276	0.11	NA	0.07	0.15	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.949111	NA	NA	NA	NA	NA	0.08	NA	5.8917
1063	8	23059324	23059324	C	G	exonic	TNFRSF10A	NA	nonsynonymous SNV	TNFRSF10A:NM_003844:exon4:c.G626C:p.R209T	exonic	ENSG00000104689	NA	nonsynonymous SNV	ENSG00000104689:ENST00000221132:exon4:c.G626C:p.R209T,ENSG00000104689:ENST00000524158:exon4:c.G20C:p.R7T	NA	NA	8p21.3	NA	NA	NA	NA	rs20575	0.57	0.57	0.555	0.579473	0.4553	0.9732	0.6138	0.2769	0.6861	0.46	0.98	0.58	0.26	0.5279	0.98	1	T	0.0	B	0.0	B	0.549	N	1.000	P	-2.47	N	1.75	T	-0.966	T	0.000	T	0.044	-1.462	0.019	0.222	-0.547	-0.139	4.476	-1.462074	NA	1	0.458605	0.31616	NA	0.399	NA	5.8915284
1063	1	237617757	237617757	C	T	exonic	RYR2	NA	synonymous SNV	RYR2:NM_001035:exon15:c.C1359T:p.S453S	exonic	ENSG00000198626	NA	synonymous SNV	ENSG00000198626:ENST00000542537:exon14:c.C1311T:p.S437S,ENSG00000198626:ENST00000366574:exon15:c.C1359T:p.S453S,ENSG00000198626:ENST00000360064:exon16:c.C1353T:p.S451S	Score=511;Name=lod=159	NA	1q43	NA	NA	NA	NA	rs3765097	0.55	0.55	0.542	0.535743	0.5994	0.7391	0.5447	0.2769	0.6043	0.61	0.73	0.55	0.26	0.5755	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.663732	NA	NA	0.60051	0.32141	NA	0.565	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000036681.1;CLNDSDB=.;CLNDSDBID=.	5.8912566
1063	16	70395387	70395387	C	T	exonic	DDX19A	NA	synonymous SNV	DDX19A:NM_018332:exon5:c.C360T:p.N120N	exonic	ENSG00000168872	NA	nonsynonymous SNV	ENSG00000168872:ENST00000569319:exon4:c.C224T:p.T75M	Score=599;Name=lod=362	NA	16q22.1	NA	NA	NA	NA	rs1134074	0.27	0.27	0.254	0.225639	0.3996	0.3036	0.3184	0.0234	0.1738	0.4	0.28	0.33	0.02	0.3286	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.575089	NA	NA	0.380581	0.083712	NA	0.188	NA	5.891219
1063	17	40835922	40835922	A	C	exonic	CNTNAP1	NA	synonymous SNV	CNTNAP1:NM_003632:exon2:c.A151C:p.R51R	exonic	ENSG00000108797	NA	synonymous SNV	ENSG00000108797:ENST00000264638:exon2:c.A151C:p.R51R,ENSG00000108797:ENST00000591662:exon2:c.A151C:p.R51R	Score=435;Name=lod=78	NA	17q21.2	NA	NA	Name=44	NA	rs2271029	0.56	0.56	0.543	0.578275	0.5775	0.4663	0.5245	0.6014	0.7014	0.58	0.46	0.5	0.67	0.5981	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.425479	NA	NA	0.6	0.595552	ID=COSM1383417;OCCURENCE=2(large_intestine)	0.71	NA	5.8910666
1063	4	100047812	100047812	G	A	exonic	ADH4	NA	synonymous SNV	ADH4:NM_000670:exon8:c.C1051T:p.L351L	exonic	ENSG00000198099	NA	synonymous SNV	ENSG00000198099:ENST00000265512:exon8:c.C1051T:p.L351L,ENSG00000198099:ENST00000423445:exon8:c.C1108T:p.L370L,ENSG00000198099:ENST00000505590:exon9:c.C1108T:p.L370L,ENSG00000198099:ENST00000508393:exon9:c.C1108T:p.L370L	NA	NA	4q23	Score=796;Name=V$BACH1_01	NA	NA	NA	rs1126672	0.14	0.14	0.133	0.117212	0.2773	NA	0.1729	0.0696	0.0982	0.27	NA	0.19	0.07	0.2099	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.243445	NA	NA	0.288488	0.10985	ID=COSM1131320;OCCURENCE=1(prostate)	0.232	NA	5.8909786
1063	5	137902339	137902339	T	C	exonic	HSPA9	NA	synonymous SNV	HSPA9:NM_004134:exon9:c.A948G:p.K316K	exonic	ENSG00000113013	NA	synonymous SNV	ENSG00000113013:ENST00000297185:exon9:c.A948G:p.K316K	Score=521;Name=lod=174	NA	5q31.2	NA	NA	NA	NA	rs1042665	0.4	0.4	0.397	0.419928	0.2485	0.7629	0.2464	0.3464	0.4652	0.25	0.78	0.23	0.33	0.3072	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.26122	1.26122	NA	0.220465	0.317975	NA	0.268	NA	5.8905016
1063	12	124387574	124387574	G	A	exonic	DNAH10	NA	synonymous SNV	DNAH10:NM_207437:exon56:c.G9375A:p.E3125E	exonic	ENSG00000197653	NA	synonymous SNV	ENSG00000197653:ENST00000409039:exon56:c.G9375A:p.E3125E	Score=313;Name=lod=25	NA	12q24.31	NA	NA	NA	NA	rs58411567	0.33	0.33	0.309	0.335663	0.2495	0.2788	0.2925	0.5318	0.2485	0.27	0.28	0.3	0.5	0.3055	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.315923	NA	NA	0.221275	0.459819	NA	0.333	NA	5.8903916
1063	4	9909923	9909923	G	A	exonic	SLC2A9	NA	nonsynonymous SNV	SLC2A9:NM_020041:exon8:c.C1049T:p.P350L,SLC2A9:NM_001001290:exon9:c.C962T:p.P321L	exonic	ENSG00000109667	NA	nonsynonymous SNV	ENSG00000109667:ENST00000264784:exon8:c.C1049T:p.P350L,ENSG00000109667:ENST00000309065:exon9:c.C962T:p.P321L,ENSG00000109667:ENST00000506583:exon10:c.C962T:p.P321L	NA	NA	4p16.1	NA	NA	NA	NA	rs2280205	0.32	0.32	0.31	0.271166	0.4841	0.1994	0.4078	0.028	0.3579	0.5	0.24	0.44	0.04	0.4377	0.52	.	.	0.064	B	0.015	B	0.000	N	1.000	P	1.33	L	-0.89	T	-0.994	T	0.000	T	0.088	0.084	4.455	0.251	0.061	-0.066	4.825	0.084316	NA	0.32	0.521163	0.102587	NA	0.254	NA	5.8903704
1063	19	15752137	15752137	C	T	intronic	CYP4F3	NA	NA	NA	UTR5	ENSG00000186529	ENST00000587360:c.-89C>T,ENST00000585846:c.-89C>T	NA	NA	NA	NA	19p13.12	NA	Name=HEY1,HDAC2_(SC-6296),Sin3Ak-20,HNF4A_(H-171),FOXA1_(C-20),p300,RXRA,FOXA1_(SC-101058),FOXA2_(SC-6554),GR,HNF4A,Pol2,TAF1	Name=11	NA	rs1290618	0.2	0.2	0.187	0.20008	0.2763	0.1558	0.1729	0.1014	0.32	0.28	0.18	0.21	0.11	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.348844	NA	NA	NA	NA	NA	0.203	NA	5.8903667
1063	16	28837515	28837515	T	C	intronic	ATXN2L	NA	NA	NA	intronic	ENSG00000168488	NA	NA	NA	NA	Name=Inflammatory bowel disease (early onset)	16p11.2	NA	Name=c-Myc,CTCF	Name=42	NA	rs8049439	0.36	0.36	0.315	0.35623	0.3439	0.2857	0.5043	0.4433	0.2188	0.35	0.28	0.42	0.42	0.3797	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.345583	NA	NA	0.386047	0.447201	ID=COSN165165;OCCURENCE=1(breast)	0.246	NA	5.890353
1063	15	86312681	86312681	G	A	exonic	KLHL25	NA	synonymous SNV	KLHL25:NM_022480:exon2:c.C361T:p.L121L	exonic	ENSG00000183655	NA	synonymous SNV	ENSG00000183655:ENST00000337975:exon2:c.C361T:p.L121L,ENSG00000183655:ENST00000536947:exon2:c.C361T:p.L121L	Score=437;Name=lod=80	NA	15q25.3	NA	NA	NA	NA	rs11073537	0.15	0.15	0.146	0.125	0.2883	0.0188	0.2291	0.0106	0.1472	0.3	0.03	0.25	0.01	0.2179	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.106594	NA	NA	0.270412	0.045867	NA	0.196	NA	5.8900546
1063	1	39919346	39919346	T	G	intronic	MACF1	NA	NA	NA	intronic	ENSG00000127603	NA	NA	NA	NA	NA	1p34.3	NA	Name=CEBPB	Name=76	NA	rs688320	0.1	0.1	0.11	0.102636	0.0258	0.1766	0.0432	0.1808	0.0419	0.02	0.17	0.04	0.2	0.0522	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.23682	NA	NA	0.032209	0.163867	NA	0.087	NA	5.889791
1063	20	18485443	18485443	G	A	intergenic	RBBP9,SEC23B	dist=7556;dist=2745	NA	NA	ncRNA_exonic	ENSG00000214612	NA	NA	NA	Score=741;Name=lod=1363	NA	20p11.23	NA	Name=CTCF_(SC-5916)	NA	NA	rs73108959	0.06	0.06	0.049	0.0527157	0.1113	0.0357	0.072	0.0045	0.0613	0.12	0.03	0.08	0.01	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.746413	NA	NA	NA	NA	NA	0.116	NA	5.8887
1063	1	880390	880390	C	A	intronic	NOC2L	NA	NA	NA	intronic	ENSG00000188976	NA	NA	NA	NA	NA	1p36.33	NA	Name=ZNF263,Egr-1,USF1_(SC-8983),GATA-2,Pol2	Name=14	NA	rs3748593	0.08	0.08	0.076	0.0842652	0.0378	0.0675	0.0735	0.1921	0.0112	0.03	0.07	0.07	0.18	0.046	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.221049	NA	NA	0.027558	0.176577	NA	0.043	NA	5.888642
1063	15	86311695	86311695	G	A	exonic	KLHL25	NA	synonymous SNV	KLHL25:NM_022480:exon2:c.C1347T:p.F449F	exonic	ENSG00000183655	NA	synonymous SNV	ENSG00000183655:ENST00000337975:exon2:c.C1347T:p.F449F,ENSG00000183655:ENST00000536947:exon2:c.C1347T:p.F449F	Score=343;Name=lod=33	NA	15q25.3	NA	NA	NA	NA	rs1978391	0.15	0.15	0.131	0.125	0.2883	0.0188	0.2291	0.0106	0.1472	0.3	0.03	0.25	0.01	0.2185	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.969208	NA	NA	0.271807	0.045413	NA	0.196	NA	5.8880596
1063	1	94643531	94643531	T	C	exonic	ARHGAP29	NA	synonymous SNV	ARHGAP29:NM_004815:exon21:c.A2673G:p.Q891Q	exonic	ENSG00000137962	NA	synonymous SNV	ENSG00000137962:ENST00000260526:exon21:c.A2673G:p.Q891Q,ENSG00000137962:ENST00000552844:exon21:c.A2673G:p.Q891Q	NA	NA	1p22.1	NA	NA	Name=4	NA	rs1048854	0.15	0.15	0.132	0.136182	0.2962	0.002	0.2147	0.0318	0.1953	0.3	0.0017	0.23	0.04	0.2181	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.134233	NA	NA	0.264535	0.068997	NA	0.167	NA	5.8878316
1063	10	33469181	33469181	A	G	exonic	NRP1	NA	synonymous SNV	NRP1:NM_001244972:exon17:c.T2577C:p.S859S,NRP1:NM_001244973:exon17:c.T2574C:p.S858S,NRP1:NM_003873:exon17:c.T2595C:p.S865S	exonic	ENSG00000099250	NA	synonymous SNV	ENSG00000099250:ENST00000413802:exon2:c.T141C:p.S47S,ENSG00000099250:ENST00000374875:exon16:c.T2031C:p.S677S,ENSG00000099250:ENST00000395995:exon16:c.T2544C:p.S848S,ENSG00000099250:ENST00000374867:exon17:c.T2595C:p.S865S,ENSG00000099250:ENST00000265371:exon18:c.T2595C:p.S865S	Score=603;Name=lod=375	NA	10p11.22	NA	NA	NA	NA	rs1048804	0.42	0.42	0.404	0.424321	0.2455	0.622	0.2061	0.5666	0.3671	0.23	0.69	0.25	0.53	0.2981	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.663208	NA	NA	0.235349	0.501589	ID=COSM146924;OCCURENCE=1(stomach)	0.384	NA	5.8877176
1063	7	39472846	39472846	G	A	exonic	POU6F2	NA	synonymous SNV	POU6F2:NM_001166018:exon8:c.G1197A:p.Q399Q,POU6F2:NM_007252:exon8:c.G1197A:p.Q399Q	exonic	ENSG00000106536	NA	synonymous SNV	ENSG00000106536:ENST00000416452:exon2:c.G294A:p.Q98Q,ENSG00000106536:ENST00000559001:exon5:c.G1032A:p.Q344Q,ENSG00000106536:ENST00000524147:exon6:c.G1032A:p.Q344Q,ENSG00000106536:ENST00000518318:exon7:c.G1197A:p.Q399Q,ENSG00000106536:ENST00000520104:exon7:c.G1173A:p.Q391Q,ENSG00000106536:ENST00000403058:exon8:c.G1197A:p.Q399Q	Score=615;Name=lod=420	NA	7p14.1	NA	NA	NA	NA	rs2302122	0.33	0.33	0.329	0.321286	0.2386	0.5188	0.2637	0.3253	0.2382	0.24	0.51	0.24	0.33	0.287	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.046737	NA	NA	0.253372	0.3468	NA	0.246	NA	5.8876946
1063	1	145109493	145109493	C	T	intronic	NBPF9,SEC22B	NA	NA	NA	ncRNA_intronic	ENSG00000223380	NA	NA	NA	NA	NA	1q21.1	NA	Name=BDP1	Name=8	NA	rs2442651	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4457	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.154767	NA	NA	NA	NA	NA	0.116	NA	5.8876333
1063	5	73144845	73144845	A	G	exonic	ARHGEF28	NA	synonymous SNV	ARHGEF28:NM_001244364:exon5:c.A741G:p.S247S,ARHGEF28:NM_001080479:exon13:c.A1680G:p.S560S,ARHGEF28:NM_001177693:exon13:c.A1680G:p.S560S	exonic	ENSG00000214944	NA	synonymous SNV	ENSG00000214944:ENST00000296799:exon5:c.A741G:p.S247S,ENSG00000214944:ENST00000426542:exon12:c.A1680G:p.S560S,ENSG00000214944:ENST00000437974:exon12:c.A1680G:p.S560S,ENSG00000214944:ENST00000287898:exon13:c.A1680G:p.S560S,ENSG00000214944:ENST00000296794:exon13:c.A1680G:p.S560S,ENSG00000214944:ENST00000513042:exon13:c.A1680G:p.S560S,ENSG00000214944:ENST00000545377:exon13:c.A1680G:p.S560S	Score=532;Name=lod=193	NA	5q13.2	Score=802;Name=V$PBX1_02	NA	NA	NA	rs2973568	0.63	0.63	0.64	0.676318	0.5577	0.5109	0.5937	0.9531	0.6534	0.56	0.47	0.61	0.93	0.6514	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.299993	1.299993	NA	0.570225	0.895011	NA	0.638	NA	5.8873416
1063	7	100550203	100550203	T	A	intergenic	ACHE,MUC12	dist=56662;dist=62701	NA	NA	exonic	ENSG00000228273	NA	nonsynonymous SNV	ENSG00000228273:ENST00000379458:exon2:c.T784A:p.S262T	NA	NA	7q22.1	NA	NA	NA	NA	rs75141335	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4985	0.45	1	T	.	.	.	.	.	.	.	.	0.55	N	.	.	-0.938	T	0.000	T	0.07	0.168	4.906	0.671	0.182	-1.002	2.683	0.168313	NA	1	0.447765	0.430936	ID=COSM304007;OCCURENCE=1(central_nervous_system)	NA	NA	5.8870684
1063	6	33173377	33173377	G	A	intronic	HSD17B8	NA	NA	NA	intronic	ENSG00000204228	NA	NA	NA	NA	NA	6p21.32	NA	Name=eGFP-JunB,JunD,Pol2,Pol2-4H8,c-Fos,eGFP-JunD,c-Jun,BAF170,eGFP-FOS,BATF	Name=94	NA	rs116067382	0.03	0.03	0.029	0.0265575	0.0368	0.0129	0.0274	0.0129	0.0481	0.03	0.01	0.04	0.02	0.0354	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.739747	NA	NA	0.04099	0.006954	NA	0.072	NA	5.88681
1063	1	46810670	46810670	T	C	exonic	NSUN4	NA	synonymous SNV	NSUN4:NM_001256127:exon2:c.T144C:p.D48D,NSUN4:NM_001256128:exon2:c.T144C:p.D48D,NSUN4:NM_199044:exon2:c.T291C:p.D97D	exonic	ENSG00000117481	NA	synonymous SNV	ENSG00000117481:ENST00000307089:exon2:c.T291C:p.D97D,ENSG00000117481:ENST00000474844:exon2:c.T291C:p.D97D,ENSG00000117481:ENST00000537428:exon2:c.T144C:p.D48D,ENSG00000117481:ENST00000536062:exon3:c.T144C:p.D48D	Score=407;Name=lod=60	NA	1p33	NA	NA	NA	NA	rs17361763	0.16	0.16	0.153	0.131789	0.2724	0.0179	0.147	0.1331	0.092	0.27	0.02	0.17	0.14	0.2178	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.555637	NA	NA	0.289884	0.152746	NA	0.217	NA	5.8865826
1063	17	37213307	37213307	C	T	ncRNA_exonic	LOC100131347	NA	NA	NA	ncRNA_exonic	ENSG00000263818	NA	NA	NA	NA	NA	17q12	NA	Name=Egr-1,ZNF263,Pol2-4H8,Nrf1,TBP,HEY1,SRF,Pol2,Mxi1_(bHLH),PU.1,YY1_(C-20),TAF1,E2F6_(H-50),POU2F2,HMGN3,Oct-2	Name=147	NA	rs4795337	0.72	0.72	0.67	0.729034	0.7803	0.6339	0.8833	0.6732	0.7403	0.77	0.59	0.86	0.7	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.139478	NA	NA	NA	NA	NA	0.659	NA	5.8863666
1063	1	220197625	220197625	G	T	exonic	EPRS	NA	nonsynonymous SNV	EPRS:NM_004446:exon8:c.C924A:p.D308E	exonic	ENSG00000136628	NA	nonsynonymous SNV	ENSG00000136628:ENST00000366923:exon8:c.C924A:p.D308E	Score=428;Name=lod=73	NA	1q41	NA	NA	NA	NA	rs2230301	0.88	0.88	0.894	0.898962	0.7932	0.9395	0.8732	0.9902	0.8609	0.79	0.94	0.85	0.98	0.845	0.98	1	T	0.0	B	0.001	B	0.000	N	1.000	P	-0.655	N	2.05	T	-0.988	T	0.000	T	0.048	-1.403	0.023	-1.6	-0.807	0.354	7.245	-1.403151	NA	1	0.808953	0.956877	NA	0.891	NA	5.8861804
1063	19	2042745	2042745	C	T	intronic	MKNK2	NA	NA	NA	intronic	ENSG00000099875	NA	NA	NA	NA	NA	19p13.3	NA	Name=AP-2gamma	Name=10	NA	rs72981432	0.02	0.02	0.014	0.0115815	0.0388	NA	0.013	0.0008	0.0092	0.04	NA	0.01	0.002	0.0432	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.371467	NA	NA	0.031833	0.007748	NA	0.022	NA	5.886167
1063	5	14797624	14797624	T	C	intronic	ANKH	NA	NA	NA	ncRNA_exonic	ENSG00000249485	NA	NA	NA	Score=797;Name=lod=2322	NA	5p15.2	NA	NA	Name=16	NA	rs31988	0.56	0.56	0.529	0.567492	0.4473	0.7391	0.5778	0.4728	0.635	0.46	0.76	0.56	0.5	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.453103	1.453103	NA	NA	NA	NA	0.428	NA	5.8860333
1063	5	14797660	14797660	A	G	intronic	ANKH	NA	NA	NA	ncRNA_exonic	ENSG00000249485	NA	NA	NA	Score=797;Name=lod=2322	NA	5p15.2	NA	NA	Name=16	NA	rs31989	0.57	0.57	0.569	0.579673	0.4473	0.7391	0.5807	0.5174	0.635	0.46	0.76	0.56	0.53	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.658283	1.658283	NA	NA	NA	NA	0.428	NA	5.8860333
1063	12	49086963	49086963	G	A	exonic	CCNT1	NA	synonymous SNV	CCNT1:NM_001240:exon9:c.C2034T:p.P678P	exonic	ENSG00000129315	NA	synonymous SNV	ENSG00000129315:ENST00000261900:exon9:c.C2034T:p.P678P	Score=696;Name=lod=899	NA	12q13.11	Score=812;Name=V$OCT1_04	NA	NA	NA	rs3741632	0.6	0.6	0.584	0.59405	0.5746	0.7768	0.5692	0.4463	0.6431	0.59	0.75	0.57	0.45	0.6152	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.04218	NA	NA	0.59093	0.455742	NA	0.543	NA	5.8859366
1063	8	2037811	2037811	G	C	intronic	MYOM2	NA	NA	NA	intronic	ENSG00000036448	NA	NA	NA	NA	NA	8p23.3	NA	Name=Max,GATA-2,c-Myc	Name=8	NA	rs2294060	0.08	0.08	0.089	0.0838658	0.0427	0.0437	0.0605	0.2133	0.0092	0.04	0.04	0.07	0.18	0.043	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.501246	NA	NA	0.028605	0.201089	NA	0.08	NA	5.885695
1063	13	19751544	19751544	C	T	exonic	TUBA3C	NA	synonymous SNV	TUBA3C:NM_006001:exon4:c.G579A:p.T193T	exonic	ENSG00000198033	NA	synonymous SNV	ENSG00000198033:ENST00000400113:exon4:c.G579A:p.T193T	Score=819;Name=lod=2831	NA	13q12.11	NA	NA	NA	NA	rs2297224	0.29	0.29	0.222	0.288738	0.2674	0.3671	0.2824	0.2171	0.3313	0.26	0.4	0.3	0.2	0.2722	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.216918	NA	NA	0.24174	0.203132	NA	0.283	NA	5.8853266
1063	4	77880193	77880193	G	A	intronic	SEPT11	NA	NA	NA	ncRNA_exonic	ENSG00000234036	NA	NA	NA	Score=363;Name=lod=40	NA	4q21.1	NA	NA	Name=6	NA	rs6833311	0.37	0.37	0.354	0.347244	0.4483	0.2768	0.3689	0.2844	0.3855	0.46	0.29	0.41	0.29	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.704191	1.704191	NA	NA	NA	NA	0.348	NA	5.8850333
1064	19	7166376	7166376	C	T	exonic	INSR	NA	synonymous SNV	INSR:NM_000208:exon8:c.G1650A:p.A550A,INSR:NM_001079817:exon8:c.G1650A:p.A550A	exonic	ENSG00000171105	NA	synonymous SNV	ENSG00000171105:ENST00000600492:exon2:c.G51A:p.A17A,ENSG00000171105:ENST00000302850:exon8:c.G1650A:p.A550A,ENSG00000171105:ENST00000341500:exon8:c.G1650A:p.A550A	NA	NA	19p13.2	Score=812;Name=V$PAX4_01	NA	NA	NA	rs2059806	0.23	0.23	0.237	0.244808	0.2853	0.2798	0.2363	0.1793	0.2618	0.29	0.22	0.23	0.17	0.2549	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.260014	NA	NA	0.241628	0.194054	ID=COSM148469;OCCURENCE=1(stomach)	0.159	NA	5.8848386
1064	1	110466338	110466338	C	A	exonic	CSF1	NA	synonymous SNV	CSF1:NM_000757:exon6:c.C1095A:p.T365T,CSF1:NM_172212:exon6:c.C1095A:p.T365T	exonic	ENSG00000184371	NA	synonymous SNV	ENSG00000184371:ENST00000329608:exon6:c.C1095A:p.T365T,ENSG00000184371:ENST00000369802:exon6:c.C1095A:p.T365T	NA	NA	1p13.3	NA	Name=Rad21,CTCF,PU.1,SMC3_(ab9263)	Name=25	NA	rs333970	0.45	0.45	0.435	0.430112	0.6213	0.4018	0.5749	0.1067	0.5971	0.63	0.41	0.57	0.13	0.5573	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.317911	NA	NA	0.604651	0.19133	NA	0.5	NA	5.8834156
1064	3	156009614	156009614	A	G	UTR5	KCNAB1	NM_172159:c.-83A>G	NA	NA	UTR5	ENSG00000169282	ENST00000302490:c.-83A>G	NA	NA	NA	NA	3q25.31	Score=888;Name=V$NFKAPPAB65_01	NA	Name=45	NA	rs2290165	0.45	0.45	0.431	0.479233	0.4503	0.5218	0.317	0.5348	0.5051	0.44	0.52	0.33	0.48	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.143513	NA	NA	NA	NA	NA	0.391	NA	5.8830334
1064	11	121448090	121448090	T	G	exonic	SORL1	NA	synonymous SNV	SORL1:NM_003105:exon25:c.T3561G:p.S1187S	exonic	ENSG00000137642	NA	synonymous SNV	ENSG00000137642:ENST00000532694:exon2:c.T99G:p.S33S,ENSG00000137642:ENST00000534286:exon2:c.T291G:p.S97S,ENSG00000137642:ENST00000525532:exon5:c.T393G:p.S131S,ENSG00000137642:ENST00000260197:exon25:c.T3561G:p.S1187S	Score=630;Name=lod=483	NA	11q24.1	NA	NA	NA	NA	rs2070045	0.32	0.32	0.251	0.340855	0.2406	0.5685	0.438	0.0787	0.4949	0.24	0.58	0.36	0.11	0.3127	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.915565	NA	NA	0.231565	0.10168	ID=COSM147339;OCCURENCE=1(stomach)	0.304	NA	5.8818016
1064	5	79952426	79952426	G	A	intronic	MSH3	NA	NA	NA	intronic	ENSG00000113318	NA	NA	NA	NA	NA	5q14.1	NA	Name=CTCF,Rad21	Name=25	NA	rs1650694	NA	NA	NA	0.105831	0.1193	0.0169	0.0793	0.2118	0.0593	NA	NA	NA	NA	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.829058	NA	NA	NA	NA	NA	0.225	NA	5.8807
1064	2	72707874	72707874	A	G	exonic	EXOC6B	NA	synonymous SNV	EXOC6B:NM_015189:exon17:c.T1671C:p.V557V	exonic	ENSG00000144036	NA	synonymous SNV	ENSG00000144036:ENST00000272427:exon17:c.T1671C:p.V557V,ENSG00000144036:ENST00000410104:exon17:c.T1671C:p.V557V	Score=677;Name=lod=753	NA	2p13.2	NA	NA	NA	NA	rs653220	0.33	0.33	0.376	0.347644	0.2346	0.0069	0.2118	0.9546	0.091	0.23	0.01	0.23	0.94	0.322	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.430188	NA	NA	0.22968	0.798875	NA	0.449	NA	5.8803866
1064	1	21894816	21894816	T	C	intronic	ALPL	NA	NA	NA	intronic	ENSG00000162551	NA	NA	NA	NA	NA	1p36.12	NA	Name=c-Fos	Name=53	NA	rs3738097	0.28	0.28	0.259	0.267173	0.1203	0.4534	0.268	0.2655	0.228	0.13	0.49	0.26	0.28	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.167323	NA	NA	NA	NA	NA	0.181	NA	5.8797
1064	7	143088823	143088823	T	C	exonic	EPHA1	NA	synonymous SNV	EPHA1:NM_005232:exon17:c.A2742G:p.P914P	exonic	ENSG00000146904	NA	synonymous SNV	ENSG00000146904:ENST00000275815:exon17:c.A2742G:p.P914P	NA	NA	7q34	Score=916;Name=V$LMO2COM_02	Name=Pol2,Pol2-4H8	Name=77	NA	rs1804527	0.95	0.95	0.942	0.958866	0.9245	0.9931	0.9798	0.9198	0.9969	0.91	1	0.98	0.93	0.9365	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.71766	NA	NA	0.926047	0.916704	NA	0.913	NA	5.8796196
1064	19	58718269	58718269	G	A	exonic	ZNF274	NA	unknown	UNKNOWN	exonic	ENSG00000171606	NA	nonsynonymous SNV	ENSG00000171606:ENST00000424679:exon2:c.G124A:p.V42I,ENSG00000171606:ENST00000345813:exon4:c.G343A:p.V115I,ENSG00000171606:ENST00000326804:exon5:c.G439A:p.V147I	NA	NA	19q13.43	NA	NA	NA	NA	rs7256349	0.15	0.15	0.136	0.122404	0.2843	NA	0.183	0.0333	0.1595	0.29	NA	0.23	0.05	0.2251	0.29	0.36	T	0.187	B	0.055	B	0.231	N	1.000	P	0	N	3.38	T	-0.921	T	0.000	T	0.027	-0.732	0.87	-1.71	-0.265	-0.011	3.778	-0.732191	NA	0.46	0.278301	0.062146	NA	0.116	NA	5.8789657
1064	9	15527348	15527348	A	T	intergenic	PSIP1,CCDC171	dist=16345;dist=25749	NA	NA	ncRNA_exonic	ENSG00000213362	NA	NA	NA	Score=762;Name=lod=1673	NA	9p22.3	NA	Name=USF-1	NA	NA	rs28515581	0.21	0.21	0.182	0.246805	0.1213	0.124	0.1124	0.5499	0.1881	0.1	0.12	0.1	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.210124	NA	NA	NA	NA	ID=COSN168475;OCCURENCE=1(large_intestine)	0.21	NA	5.8787
1064	3	18427924	18427924	G	T	exonic	SATB1	NA	synonymous SNV	SATB1:NM_001131010:exon8:c.C1386A:p.P462P,SATB1:NM_001195470:exon8:c.C1386A:p.P462P,SATB1:NM_002971:exon8:c.C1386A:p.P462P	exonic	ENSG00000182568	NA	synonymous SNV	ENSG00000182568:ENST00000338745:exon8:c.C1386A:p.P462P,ENSG00000182568:ENST00000417717:exon8:c.C1386A:p.P462P,ENSG00000182568:ENST00000454909:exon8:c.C1386A:p.P462P	Score=472;Name=lod=110	NA	3p24.3	Score=708;Name=V$HOX13_01	NA	NA	NA	rs2229261	0.68	0.68	0.672	0.689097	0.5716	0.9226	0.7291	0.5809	0.6871	0.57	0.93	0.68	0.56	0.6373	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.594576	NA	NA	0.579651	0.583976	NA	0.638	NA	5.8781156
1064	12	52713218	52713218	C	T	intronic	KRT83	NA	NA	NA	intronic	ENSG00000170523	NA	NA	NA	NA	NA	12q13.13	NA	Name=CTCF_(SC-5916),Rad21,CTCF	Name=17	NA	rs10876276	0.2	0.2	0.186	0.177316	0.1223	0.4355	0.1859	0.0257	0.1667	0.13	0.42	0.22	0.03	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.931968	1.931968	NA	NA	NA	NA	0.051	NA	5.8777
1064	14	39685539	39685539	A	G	intergenic	PNN,MIA2	dist=33117;dist=17586	NA	NA	ncRNA_exonic	ENSG00000270503	NA	NA	NA	Score=764;Name=lod=1697	NA	14q21.1	NA	NA	Name=16	NA	rs7140164	0.23	0.23	NA	0.202276	0.1233	0.4435	0.1369	0.1725	0.1217	0.12	0.47	0.16	0.17	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.017896	NA	NA	NA	NA	NA	0.101	NA	5.8767
1064	12	7053149	7053149	A	C	upstream	C12orf57	NA	NA	NA	ncRNA_exonic	ENSG00000272173	NA	NA	NA	NA	NA	12p13.31	NA	Name=Pbx3,Sin3Ak-20,Pol2-4H8,HDAC2_(SC-6296),Egr-1,STAT3,YY1,ELK4,FOXA1_(C-20),Pol2(b),JunD,FOSL2,SIRT6,EBF,IRF1,GATA2_(CG2-96),USF-1,Nrf1,TCF12,THAP1_(SC-98174),PAX5-C20,PAX5-N19,SRF,ZBTB7A_(SC-34508),HEY1,BCL3,NFKB,STAT2,TAF7_(SQ-8),BCLAF1_(M33-P5B11),BCL11A,YY1_(C-20),IRF4_(M-17),TR4,MEF2A,NRSF,SP1,Pol2,MEF2C_(SC-13268),Pol2(phosphoS2),TCF4,POU2F2,ZBTB33,GABP,HMGN3,ETS1,TAF1,CHD2_(N-1250),BATF,EBF1_(C-8),p300,Oct-2,STAT1,FOXA2_(SC-6554),ELF1_(SC-631),FOXA1_(SC-101058)	Name=148	NA	rs1044189	0.34	0.34	0.313	0.362819	0.2903	0.253	0.3516	0.5378	0.3221	0.29	0.23	0.38	0.51	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.057825	NA	NA	NA	NA	NA	0.304	NA	5.8763666
1064	5	147499670	147499670	C	T	exonic	SPINK5	NA	synonymous SNV	SPINK5:NM_001127698:exon25:c.C2412T:p.G804G,SPINK5:NM_001127699:exon25:c.C2412T:p.G804G,SPINK5:NM_006846:exon25:c.C2412T:p.G804G	exonic	ENSG00000133710	NA	synonymous SNV	ENSG00000133710:ENST00000256084:exon25:c.C2412T:p.G804G,ENSG00000133710:ENST00000359874:exon25:c.C2412T:p.G804G,ENSG00000133710:ENST00000398454:exon25:c.C2412T:p.G804G,ENSG00000133710:ENST00000508733:exon25:c.C2355T:p.G785G	Score=433;Name=lod=77	NA	5q32	Score=874;Name=V$NKX3A_01	NA	NA	NA	rs33920397	0.49	0.49	0.472	0.488419	0.5924	0.4821	0.634	0.3139	0.5204	0.56	0.46	0.59	0.36	0.5825	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.141384	NA	NA	0.615553	0.373326	ID=COSM149975;OCCURENCE=1(stomach)	0.471	NA	5.8762136
1064	19	48543923	48543923	C	A	exonic	CABP5	NA	synonymous SNV	CABP5:NM_019855:exon3:c.G177T:p.T59T	exonic	ENSG00000105507	NA	synonymous SNV	ENSG00000105507:ENST00000293255:exon3:c.G177T:p.T59T	NA	NA	19q13.33	Score=889;Name=V$SOX9_B1	NA	NA	NA	rs12982629	0.16	0.16	0.158	0.141773	0.2724	0.0099	0.2248	0.0825	0.1646	0.27	0.02	0.26	0.11	0.2344	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.745215	NA	NA	0.283721	0.124376	NA	0.225	NA	5.8761456
1064	19	39914748	39914748	G	A	exonic	PLEKHG2	NA	nonsynonymous SNV	PLEKHG2:NM_022835:exon19:c.G2975A:p.R992K	exonic	ENSG00000090924	NA	nonsynonymous SNV	ENSG00000090924:ENST00000425673:exon17:c.G2888A:p.R963K,ENSG00000090924:ENST00000409794:exon19:c.G2975A:p.R992K,ENSG00000090924:ENST00000458508:exon19:c.G2798A:p.R933K	NA	NA	19q13.2	NA	NA	NA	NA	rs31726	0.53	0.53	0.553	0.575879	0.4911	0.5962	0.4798	0.6702	0.5828	0.48	0.55	0.48	0.65	0.5083	0.65	.	.	0.004	B	0.009	B	0.136	N	1.000	P	1.04	L	-0.43	T	-0.924	T	0.000	T	0.235	1.83	12.08	0.404	0.200	0.589	5.814	1.830209	1.830209	0	0.458372	0.64798	NA	0.478	NA	5.8755614
1065	11	76234185	76234185	C	T	intronic	C11orf30	NA	NA	NA	intronic	ENSG00000158636	NA	NA	NA	Score=493;Name=lod=134	NA	11q13.5	Score=836;Name=V$TST1_01	NA	NA	NA	rs11600501	0.03	0.03	0.022	0.024361	0.0447	NA	0.0259	0.0371	0.0102	0.04	NA	0.03	0.06	0.0353	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.280027	3.280027	NA	0.0452	0.037273	NA	0.014	NA	5.8748
1065	20	1616892	1616892	A	G	exonic	SIRPG	NA	synonymous SNV	SIRPG:NM_001039508:exon3:c.T690C:p.H230H,SIRPG:NM_018556:exon3:c.T690C:p.H230H	exonic	ENSG00000089012	NA	synonymous SNV	ENSG00000089012:ENST00000216927:exon3:c.T690C:p.H230H,ENSG00000089012:ENST00000303415:exon3:c.T690C:p.H230H,ENSG00000089012:ENST00000381580:exon3:c.T591C:p.H197H,ENSG00000089012:ENST00000381583:exon3:c.T690C:p.H230H	Score=300;Name=lod=22	NA	20p13	NA	NA	NA	NA	rs2277760	0.31	0.31	0.263	0.347843	0.2495	0.6379	0.2522	0.1135	0.5348	0.25	0.6	0.25	0.12	0.3057	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.146696	NA	NA	0.237093	0.122106	NA	0.297	NA	5.8743736
1065	9	36013199	36013199	G	A	intergenic	OR2S2,RECK	dist=55048;dist=23711	NA	NA	ncRNA_exonic	ENSG00000228307	NA	NA	NA	Score=243;Name=lod=13	NA	9p13.3	Score=747;Name=V$TAXCREB_02	NA	NA	NA	rs7865316	0.19	0.19	0.188	0.201877	0.1262	0.2728	0.1124	0.2557	0.1973	0.12	0.27	0.12	0.26	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.462037	NA	NA	NA	NA	NA	0.254	NA	5.8738
1065	16	85116312	85116312	C	T	intronic	KIAA0513	NA	NA	NA	intronic	ENSG00000135709	NA	NA	NA	NA	NA	16q24.1	NA	Name=USF-1,USF2	Name=6	NA	rs2291964	0.09	0.09	0.095	0.0960463	0.1262	0.0575	0.085	0.0764	0.1391	0.13	0.06	0.1	0.08	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00379	NA	NA	NA	NA	NA	0.13	NA	5.8738
1065	16	27709825	27709825	C	T	intronic	KIAA0556	NA	NA	NA	ncRNA_intronic	ENSG00000261329	NA	NA	NA	NA	NA	16p12.1	NA	Name=Rad21,CTCF,CTCFL_(SC-98982),GABP,SMC3_(ab9263),CTCF_(SC-5916)	Name=14	NA	rs12920169	0.15	0.15	0.157	0.142971	0.1561	0.001	0.1916	0.2905	0.0419	0.16	NA	0.18	0.28	0.1548	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.293969	1.293969	NA	0.148721	0.268093	NA	0.123	NA	5.8737123
1065	1	103352451	103352451	A	G	exonic	COL11A1	NA	synonymous SNV	COL11A1:NM_080630:exon61:c.T4422C:p.I1474I,COL11A1:NM_001190709:exon62:c.T4653C:p.I1551I,COL11A1:NM_001854:exon63:c.T4770C:p.I1590I,COL11A1:NM_080629:exon63:c.T4806C:p.I1602I	exonic	ENSG00000060718	NA	synonymous SNV	ENSG00000060718:ENST00000512756:exon61:c.T4422C:p.I1474I,ENSG00000060718:ENST00000353414:exon62:c.T4653C:p.I1551I,ENSG00000060718:ENST00000358392:exon63:c.T4806C:p.I1602I,ENSG00000060718:ENST00000370096:exon63:c.T4770C:p.I1590I	Score=697;Name=lod=908	NA	1p21.1	NA	NA	Name=5	NA	rs2229783	0.52	0.52	0.446	0.484625	0.6064	0.6647	0.7478	0.0499	0.5746	0.61	0.67	0.72	0.06	0.5801	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.754133	NA	NA	0.606628	0.139582	NA	0.362	NA	5.8735386
1065	6	30309508	30309508	T	C	exonic	TRIM39,TRIM39-RPP21	NA	synonymous SNV	TRIM39-RPP21:NM_001199119:exon6:c.T939C:p.P313P,TRIM39:NM_172016:exon8:c.T939C:p.P313P,TRIM39:NM_021253:exon9:c.T1029C:p.P343P	exonic	ENSG00000204599,ENSG00000248167	NA	synonymous SNV	ENSG00000248167:ENST00000513556:exon6:c.T675C:p.P225P,ENSG00000204599:ENST00000376659:exon8:c.T939C:p.P313P,ENSG00000204599:ENST00000396547:exon8:c.T1029C:p.P343P,ENSG00000204599:ENST00000396551:exon8:c.T939C:p.P313P,ENSG00000204599:ENST00000376656:exon9:c.T1029C:p.P343P,ENSG00000204599:ENST00000396548:exon9:c.T939C:p.P313P,ENSG00000204599:ENST00000540416:exon9:c.T939C:p.P313P	NA	NA	6p22.1	Score=878;Name=V$COUP_01	NA	NA	NA	rs2074474	0.34	0.34	0.291	0.376797	0.2435	0.5119	0.451	0.3109	0.411	0.22	0.48	0.41	0.3	0.3047	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.050766	NA	NA	0.245015	0.281932	NA	0.377	NA	5.8734516
1065	1	205129319	205129319	G	A	exonic	DSTYK	NA	synonymous SNV	DSTYK:NM_015375:exon8:c.C2028T:p.F676F,DSTYK:NM_199462:exon8:c.C2028T:p.F676F	exonic	ENSG00000133059	NA	synonymous SNV	ENSG00000133059:ENST00000367161:exon8:c.C2028T:p.F676F,ENSG00000133059:ENST00000367162:exon8:c.C2028T:p.F676F	Score=512;Name=lod=160	NA	1q32.1	NA	NA	NA	NA	rs1062715	0.33	0.33	0.317	0.371406	0.2565	0.4008	0.3184	0.4175	0.4346	0.25	0.42	0.33	0.37	0.301	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.152366	NA	NA	0.236163	0.382206	NA	0.225	NA	5.8730036
1065	12	124172555	124172555	A	T	intronic	TCTN2	NA	NA	NA	intronic	ENSG00000168778	NA	NA	NA	NA	NA	12q24.31	NA	Name=PU.1,NFKB	Name=7	NA	rs7298831	0.32	0.32	0.316	0.331669	0.3748	0.0605	0.2997	0.5484	0.2965	0.38	0.06	0.32	0.56	0.3567	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.367479	NA	NA	0.395698	0.546527	NA	0.304	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000114232.2;CLNDSDB=.;CLNDSDBID=.	5.872802
1065	18	22669614	22669614	A	G	intronic	ZNF521	NA	NA	NA	intronic	ENSG00000198795	NA	NA	NA	NA	NA	18q11.2	NA	Name=GATA3_(SC-268)	Name=6	NA	rs12454983	0.11	0.11	0.11	0.111621	0.1272	0.001	0.1196	0.2322	0.0409	0.11	NA	0.14	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-3.009835	NA	NA	NA	NA	NA	0.138	NA	5.8728
1065	18	52896003	52896003	A	G	intronic	TCF4	NA	NA	NA	intronic	ENSG00000196628	NA	NA	NA	NA	NA	18q21.2	NA	Name=CTCF	Name=5	NA	rs8087570	0.08	0.08	0.088	0.0908546	0.1272	0.005	0.0605	0.1142	0.1319	0.12	0.0017	0.09	0.11	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.463247	NA	NA	NA	NA	NA	0.058	NA	5.8728
1065	7	4900341	4900341	G	A	exonic	PAPOLB	NA	synonymous SNV	PAPOLB:NM_020144:exon1:c.C1101T:p.S367S	exonic	ENSG00000218823	NA	synonymous SNV	ENSG00000218823:ENST00000404991:exon1:c.C1098T:p.S366S	Score=497;Name=lod=139	NA	7p22.1	NA	NA	NA	NA	rs17135247	0.22	0.22	0.207	0.235423	0.2515	0.3105	0.2622	0.0325	0.3967	0.25	0.3	0.24	0.05	0.2683	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.646616	NA	NA	0.274767	0.063864	NA	0.239	NA	5.8720996
1065	22	44681612	44681612	A	G	exonic	KIAA1644	NA	synonymous SNV	KIAA1644:NM_001099294:exon4:c.T295C:p.L99L	exonic	ENSG00000138944	NA	synonymous SNV	ENSG00000138944:ENST00000381176:exon4:c.T295C:p.L99L	Score=563;Name=lod=260	NA	22q13.31	NA	Name=CTCF	NA	NA	rs135388	0.45	0.45	0.429	0.465056	0.6163	0.3284	0.3674	0.4017	0.6053	0.63	0.29	0.41	0.37	0.5508	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.800719	NA	NA	0.627561	0.443765	NA	0.486	NA	5.8720056
1065	6	33138677	33138677	G	A	exonic	COL11A2	NA	synonymous SNV	COL11A2:NM_080679:exon43:c.C3063T:p.P1021P,COL11A2:NM_080681:exon44:c.C3126T:p.P1042P,COL11A2:NM_080680:exon46:c.C3384T:p.P1128P	exonic	ENSG00000204248	NA	synonymous SNV	ENSG00000204248:ENST00000361917:exon43:c.C3063T:p.P1021P,ENSG00000204248:ENST00000374708:exon44:c.C3126T:p.P1042P,ENSG00000204248:ENST00000374712:exon44:c.C3141T:p.P1047P,ENSG00000204248:ENST00000374713:exon44:c.C3243T:p.P1081P,ENSG00000204248:ENST00000357486:exon45:c.C3321T:p.P1107P,ENSG00000204248:ENST00000374714:exon45:c.C3306T:p.P1102P,ENSG00000204248:ENST00000395197:exon45:c.C3204T:p.P1068P,ENSG00000204248:ENST00000341947:exon46:c.C3384T:p.P1128P	NA	NA	6p21.32	Score=763;Name=V$PAX5_02	NA	NA	NA	rs1799911	0.22	0.22	0.217	0.245807	0.2525	0.2431	0.2579	0.1225	0.3998	0.24	0.26	0.21	0.14	0.2637	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.230399	NA	NA	0.278516	0.147915	NA	0.203	NA	5.8719506
1065	9	131607591	131607591	C	T	intronic	CCBL1	NA	NA	NA	intronic	ENSG00000171097	NA	NA	NA	NA	NA	9q34.11	NA	Name=CTCF_(SC-5916),HA-E2F1,GATA-2,c-Myc,AP-2gamma,CTCFL_(SC-98982),CTCF,Rad21	Name=39	NA	rs41275928	0.07	0.07	0.065	0.0706869	0.0408	0.0913	0.0403	0.09	0.0757	0.04	0.11	0.05	0.09	0.0503	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.895395	NA	NA	0.037037	0.07283	NA	0.08	NA	5.871863
1065	6	32548469	32548469	A	G	intronic	HLA-DRB1	NA	NA	NA	intronic	ENSG00000196126	NA	NA	NA	NA	NA	6p21.32	NA	Name=Pol2-4H8	Name=3	NA	rs3830133	0.08	0.08	0.037	0.0646965	0.1282	0.0208	0.1052	0.0575	0.0256	0.11	0.03	0.11	0.06	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.914997	NA	NA	NA	NA	NA	0.058	NA	5.8718
1065	16	66596936	66596936	G	T	intronic	CKLF,CKLF-CMTM1	NA	NA	NA	intronic	ENSG00000217555,ENSG00000254788	NA	NA	NA	NA	NA	16q21	NA	Name=GATA-1	Name=3	NA	rs59529247	NA	NA	NA	0.0992412	0.0497	0.1101	0.1412	0.0998	0.1084	NA	NA	NA	NA	0.0789	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.144381	NA	NA	NA	NA	NA	NA	NA	5.8714
1065	15	65108479	65108479	T	C	UTR3	PIF1	NM_025049:c.*18A>G	NA	NA	UTR3	ENSG00000140451	ENST00000268043:c.*18A>G,ENST00000559239:c.*18A>G	NA	NA	NA	NA	15q22.31	Score=899;Name=V$EVI1_02	Name=EBF	NA	NA	rs8036568	0.31	0.31	0.284	0.273962	0.1233	0.7669	0.2695	0.1067	0.1503	0.13	0.78	0.24	0.1	0.2034	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.842186	NA	NA	0.13538	0.116712	NA	0.145	NA	5.8712534
1065	5	145508340	145508340	A	G	exonic	LARS	NA	synonymous SNV	LARS:NM_020117:exon27:c.T2775C:p.T925T	exonic	ENSG00000133706	NA	synonymous SNV	ENSG00000133706:ENST00000274562:exon26:c.T2694C:p.T898T,ENSG00000133706:ENST00000510191:exon26:c.T2613C:p.T871T,ENSG00000133706:ENST00000545646:exon26:c.T2637C:p.T879T,ENSG00000133706:ENST00000394434:exon27:c.T2775C:p.T925T	Score=401;Name=lod=57	NA	5q32	NA	NA	NA	NA	rs2895647	0.2	0.2	0.161	0.181709	0.2525	0.1984	0.3775	0.0076	0.1881	0.25	0.2	0.3	0.02	0.2641	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.01863	NA	NA	0.278837	0.060145	NA	0.261	NA	5.8712296
1065	5	67151565	67151565	G	A	intergenic	CD180,PIK3R1	dist=658948;dist=360019	NA	NA	ncRNA_intronic	ENSG00000249894,ENSG00000250421	NA	NA	NA	NA	NA	5q13.1	NA	Name=MEF2A,BCL11A	Name=6	NA	rs13182765	0.06	0.06	0.047	0.0609026	0.1292	0.001	0.1182	0.0068	0.0849	0.12	NA	0.08	0.01	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.681821	NA	NA	NA	NA	NA	0.109	NA	5.8708
1065	9	36021852	36021852	A	G	intergenic	OR2S2,RECK	dist=63701;dist=15058	NA	NA	ncRNA_exonic	ENSG00000236110	NA	NA	NA	Score=534;Name=lod=198	NA	9p13.3	Score=805;Name=V$PBX1_02	NA	NA	NA	rs10511925	0.18	0.18	0.167	0.17472	0.1292	0.2659	0.0865	0.1899	0.1697	0.12	0.26	0.11	0.21	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.524797	NA	NA	NA	NA	NA	0.246	NA	5.8708
1065	12	113403684	113403684	C	T	exonic	OAS3	NA	synonymous SNV	OAS3:NM_006187:exon12:c.C2539T:p.L847L	exonic	ENSG00000111331	NA	synonymous SNV	ENSG00000111331:ENST00000228928:exon12:c.C2539T:p.L847L	Score=346;Name=lod=34	NA	12q24.13	NA	NA	NA	NA	rs2240188	0.28	0.28	0.289	0.284145	0.2604	0.1558	0.3775	0.4221	0.1881	0.27	0.18	0.32	0.38	0.2696	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.74354	NA	NA	0.266547	0.364885	NA	0.297	NA	5.8701196
1065	21	47532500	47532500	C	T	intronic	COL6A2	NA	NA	NA	intronic	ENSG00000142173	NA	NA	NA	Score=518;Name=lod=170	NA	21q22.3	NA	NA	NA	NA	rs78822624	0.02	0.02	0.02	0.0161741	0.0417	0.002	0.0159	0.0091	0.0143	0.04	NA	0.02	0.002	0.04	0.048	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.488889	1.488889	NA	0.048391	0.008193	NA	0.014	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000079898.3;CLNDSDB=.;CLNDSDBID=.	5.869909
1065	2	47256297	47256297	C	T	intronic	TTC7A	NA	NA	NA	intronic	ENSG00000068724	NA	NA	NA	NA	NA	2p21	NA	Name=HA-E2F1,c-Myc	Name=6	NA	rs2304289	0.29	0.29	0.274	0.282149	0.1302	0.629	0.2003	0.2428	0.1922	0.14	0.6	0.2	0.22	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.58531	NA	NA	NA	NA	NA	0.225	NA	5.8698
1065	17	9791159	9791159	G	A	intronic	GLP2R	NA	NA	NA	intronic	ENSG00000065325	NA	NA	NA	NA	NA	17p13.1	NA	Name=JunD,Mxi1_(bHLH)	Name=6	NA	rs2240737	0.21	0.21	0.185	0.225839	0.1302	0.2847	0.2767	0.2156	0.2413	0.12	0.27	0.25	0.26	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.049919	NA	NA	NA	NA	ID=COSN165329;OCCURENCE=1(breast)	0.254	NA	5.8698
1065	10	115380311	115380311	C	T	intronic	NRAP	NA	NA	NA	intronic	ENSG00000197893	NA	NA	NA	NA	NA	10q25.3	Score=728;Name=V$BRACH_01	NA	Name=2	NA	rs11599399	0.03	0.03	0.026	0.0233626	0.0626	NA	0.0432	0.0076	0.0143	0.06	NA	0.06	0.01	NA	0.068	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.768104	1.768104	NA	0.067805	0.018265	NA	0.007	NA	5.869595
1065	18	23865851	23865851	C	T	exonic	TAF4B	NA	synonymous SNV	TAF4B:NM_005640:exon7:c.C978T:p.S326S	exonic	ENSG00000141384	NA	synonymous SNV	ENSG00000141384:ENST00000269142:exon7:c.C978T:p.S326S,ENSG00000141384:ENST00000400466:exon7:c.C978T:p.S326S,ENSG00000141384:ENST00000418698:exon7:c.C978T:p.S326S,ENSG00000141384:ENST00000578121:exon7:c.C978T:p.S326S	Score=407;Name=lod=60	NA	18q11.2	NA	NA	NA	NA	rs12456749	0.15	0.15	0.137	0.119609	0.2913	0.0546	0.1354	0.0439	0.1012	0.3	0.04	0.13	0.06	0.2225	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.74293	NA	NA	0.283696	0.076762	NA	0.188	NA	5.8691706
1065	19	49259529	49259529	A	G	exonic	FGF21	NA	synonymous SNV	FGF21:NM_019113:exon1:c.A36G:p.G12G	exonic	ENSG00000105550	NA	synonymous SNV	ENSG00000105550:ENST00000222157:exon1:c.A36G:p.G12G,ENSG00000105550:ENST00000593756:exon2:c.A36G:p.G12G	Score=289;Name=lod=20	Name=Dietary macronutrient intake	19q13.33	NA	NA	NA	NA	rs838133	0.75	0.75	0.716	0.771765	0.5746	0.994	0.7478	0.739	0.8067	0.58	0.99	0.71	0.74	0.6629	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.892735	NA	NA	0.560116	0.701316	NA	0.739	NA	5.8690506
1065	6	32410083	32410083	C	A	intronic	HLA-DRA	NA	NA	NA	intronic	ENSG00000204287	NA	NA	NA	NA	NA	6p21.32	NA	Name=Pol2,Pol2-4H8	Name=5	NA	rs16822616	0.1	0.1	0.066	0.0882588	0.1312	0.0407	0.098	0.0938	0.0787	0.13	0.04	0.11	0.1	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.744129	NA	NA	NA	NA	NA	0.109	NA	5.8688
1065	4	100263965	100263965	C	T	exonic	ADH1C	NA	unknown	UNKNOWN	exonic	ENSG00000248144	NA	unknown	UNKNOWN	NA	NA	4q23	Score=717;Name=V$BRACH_01	NA	NA	NA	rs1693482	0.24	0.24	0.201	0.214257	0.4046	0.0764	0.2709	0.0998	0.2751	0.41	0.07	0.3	0.12	0.3425	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.178005	2.178005	NA	0.384186	0.149796	NA	0.232	CLINSIG=other;CLNDBN=Alcohol_dependence;CLNREVSTAT=single;CLNACC=RCV000019810.1;CLNDSDB=MedGen:OMIM;CLNDSDBID=CN028882:103780	5.868714
1065	2	130949491	130949491	G	A	exonic	TUBA3E	NA	synonymous SNV	TUBA3E:NM_207312:exon5:c.C1266T:p.R422R	exonic	ENSG00000152086	NA	synonymous SNV	ENSG00000152086:ENST00000312988:exon5:c.C1266T:p.R422R	Score=466;Name=lod=104	NA	2q21.1	NA	NA	NA	NA	rs60154251	0.4	0.4	0.315	NA	NA	NA	NA	NA	NA	0.37	0.47	0.46	0.34	0.4083	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.209378	NA	NA	0.39	0.358375	NA	0.486	NA	5.8683666
1065	5	141014494	141014494	T	C	exonic	HDAC3	NA	synonymous SNV	HDAC3:NM_003883:exon3:c.A165G:p.Q55Q	exonic	ENSG00000171720	NA	synonymous SNV	ENSG00000171720:ENST00000305264:exon3:c.A165G:p.Q55Q,ENSG00000171720:ENST00000523353:exon3:c.A165G:p.Q55Q	Score=553;Name=lod=235	NA	5q31.3	NA	Name=ZNF263	NA	NA	rs2530223	0.6	0.6	0.615	0.639776	0.5726	0.3462	0.6945	0.885	0.6411	0.59	0.35	0.69	0.85	0.6253	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.29048	1.29048	NA	0.600465	0.844757	NA	0.659	NA	5.8683016
1065	21	37541998	37541998	C	T	intronic	DOPEY2	NA	NA	NA	ncRNA_exonic	ENSG00000228149	NA	NA	NA	Score=831;Name=lod=3173	NA	21q22.12	NA	NA	Name=2	NA	rs7281243	0.45	0.45	0.447	0.402756	0.4652	0.4573	0.4928	0.3502	0.2894	0.46	0.46	0.49	0.38	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.065813	NA	NA	NA	NA	NA	0.471	NA	5.8681333
1065	12	6691452	6691452	G	A	intronic	CHD4	NA	NA	NA	ncRNA_intronic	ENSG00000247853	NA	NA	NA	NA	NA	12p13.31	NA	Name=CTCF,Rad21	Name=12	NA	rs7316626	0.18	0.18	0.179	0.207668	0.1352	0.0188	0.0908	0.4894	0.1789	0.13	0.01	0.11	0.48	0.1662	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.603012	NA	NA	0.163837	0.430095	NA	0.181	NA	5.8680963
1065	3	170214585	170214585	C	T	intronic	SLC7A14	NA	NA	NA	intronic	ENSG00000013293,ENSG00000013297	NA	NA	NA	Score=501;Name=lod=145	NA	3q26.2	NA	Name=CTCF	NA	NA	rs35753997	0.18	0.18	0.2	0.202875	0.1322	NA	0.1066	0.534	0.1053	0.12	NA	0.1	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.326046	NA	NA	NA	NA	NA	0.181	NA	5.8678
1065	18	12308608	12308608	C	T	intronic	TUBB6	NA	NA	NA	intronic	ENSG00000176014	NA	NA	NA	NA	NA	18p11.21	NA	Name=Pol2,PU.1,GATA-1,c-Fos,NANOG_(SC-33759),Ini1,AP-2alpha,AP-2gamma	Name=141	NA	rs77669770	0.14	0.14	0.168	0.129193	0.1322	0.1488	0.1787	0.084	0.1319	0.14	0.18	0.16	0.09	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.898245	NA	NA	NA	NA	NA	0.145	NA	5.8678
1065	6	127797374	127797374	G	A	exonic	SOGA3	NA	synonymous SNV	SOGA3:NM_001012279:exon6:c.C1797T:p.N599N	exonic	ENSG00000214338,ENSG00000255330	NA	synonymous SNV	ENSG00000214338:ENST00000368268:exon5:c.C1797T:p.N599N,ENSG00000214338:ENST00000465909:exon6:c.C1797T:p.N599N,ENSG00000255330:ENST00000481848:exon6:c.C1797T:p.N599N,ENSG00000214338:ENST00000525778:exon6:c.C1797T:p.N599N,ENSG00000214338:ENST00000556132:exon6:c.C1797T:p.N599N	Score=628;Name=lod=477	NA	6q22.33	NA	NA	NA	NA	rs3734450	0.36	0.36	0.303	0.35004	0.2416	0.7371	0.4424	0.1309	0.2935	0.24	0.73	0.36	0.11	0.3174	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.525116	NA	NA	0.240357	0.130964	ID=COSM1440295;OCCURENCE=1(large_intestine)	0.254	NA	5.8673096
1065	11	12229655	12229655	T	G	exonic	MICAL2	NA	synonymous SNV	MICAL2:NM_014632:exon5:c.T558G:p.V186V	exonic	ENSG00000133816	NA	synonymous SNV	ENSG00000133816:ENST00000379612:exon3:c.T558G:p.V186V,ENSG00000133816:ENST00000342902:exon4:c.T558G:p.V186V,ENSG00000133816:ENST00000527546:exon4:c.T558G:p.V186V,ENSG00000133816:ENST00000256194:exon5:c.T558G:p.V186V,ENSG00000133816:ENST00000537344:exon5:c.T558G:p.V186V	NA	NA	11p15.3	Score=883;Name=V$ZID_01	NA	NA	NA	rs2279390	0.37	0.37	0.372	0.401757	0.2584	0.501	0.245	0.4856	0.4448	0.26	0.49	0.23	0.48	0.3052	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.122585	NA	NA	0.236143	0.460927	NA	0.391	NA	5.8669236
1065	12	126003890	126003890	G	A	intronic	TMEM132B	NA	NA	NA	intronic	ENSG00000139364	NA	NA	NA	NA	NA	12q24.32	NA	Name=MafK_(ab50322),MafK_(SC-477)	Name=3	NA	rs964997	0.41	0.41	0.418	0.420927	0.1332	0.749	0.2104	0.5794	0.3139	0.14	0.74	0.22	0.57	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.811427	NA	NA	NA	NA	NA	0.304	NA	5.8668
1065	12	124104049	124104049	A	G	exonic	DDX55	NA	synonymous SNV	DDX55:NM_020936:exon13:c.A1404G:p.G468G	exonic	ENSG00000111364	NA	synonymous SNV	ENSG00000111364:ENST00000421670:exon2:c.A225G:p.G75G,ENSG00000111364:ENST00000538744:exon12:c.A1311G:p.G437G,ENSG00000111364:ENST00000238146:exon13:c.A1404G:p.G468G	Score=435;Name=lod=78	NA	12q24.31	NA	NA	NA	NA	rs15587	0.24	0.24	0.241	0.252796	0.2654	0.0159	0.2205	0.4486	0.2423	0.27	0.02	0.21	0.47	0.2583	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.400012	1.400012	NA	0.276279	0.416478	NA	0.246	NA	5.8666876
1065	15	99799750	99799750	T	C	ncRNA_exonic	HSP90B2P	NA	NA	NA	ncRNA_exonic	ENSG00000259706	NA	NA	NA	Score=638;Name=lod=520	NA	15q26.3	NA	NA	Name=3	NA	rs1976589	0.8	0.8	0.816	0.817692	0.8002	0.7907	0.7752	0.9206	0.7546	0.78	0.78	0.77	0.89	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.019538	NA	1	NA	NA	NA	0.761	NA	5.8664666
1065	2	71012604	71012604	G	A	exonic	FIGLA	NA	synonymous SNV	FIGLA:NM_001004311:exon3:c.C552T:p.H184H	exonic	ENSG00000183733	NA	synonymous SNV	ENSG00000183733:ENST00000332372:exon3:c.C552T:p.H184H	NA	NA	2p13.3	NA	Name=CTCF,CTCF_(C-20),Max,c-Myc,Rad21,Sin3Ak-20,eGFP-JunD,CTCF_(SC-5916),PU.1,SMC3_(ab9263),GATA-1,eGFP-JunB,E2F6_(H-50)	Name=87	NA	rs7566541	0.78	0.78	0.802	0.797724	0.5905	0.9067	0.7032	0.9743	0.727	0.6	0.94	0.67	0.96	0.6479	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.641809	NA	NA	0.562752	0.900429	NA	0.732	NA	5.8655146
1065	11	5141980	5141980	A	G	intergenic	OR52E2,OR52A5	dist=61123;dist=10942	NA	NA	ncRNA_exonic	ENSG00000205494	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs4426129	0.72	0.72	0.737	0.735423	0.7147	0.5675	0.7176	0.8896	0.7342	0.71	0.58	0.72	0.91	0.7164	0.91	0	D	0.174	B	0.133	B	.	.	0.996	N	.	.	.	.	-1.009	T	0.000	T	.	-0.61	1.284	-3.87	-0.481	-3.739	7.255	-0.609634	NA	0.79	0.703816	0.868923	NA	0.775	NA	5.865084
1066	10	28409054	28409054	C	T	intronic	MPP7	NA	NA	NA	intronic	ENSG00000150054	NA	NA	NA	NA	NA	10p12.1	NA	Name=TCF4,STAT1,STAT3,JunD,AP-2alpha,AP-2gamma	Name=50	NA	rs10763644	0.41	0.41	0.403	0.457268	0.1352	0.8839	0.4251	0.379	0.4775	0.13	0.88	0.36	0.31	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.459803	NA	NA	NA	NA	NA	0.377	NA	5.8648
1066	4	100260789	100260789	T	C	exonic	ADH1C	NA	unknown	UNKNOWN	exonic	ENSG00000248144	NA	unknown	UNKNOWN	Score=502;Name=lod=146	NA	4q23	NA	NA	NA	NA	rs698	0.24	0.24	0.188	0.214257	0.4046	0.0764	0.2709	0.0991	0.2761	0.42	0.07	0.31	0.12	0.3444	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.118336	NA	NA	0.38629	0.151703	NA	0.225	CLINSIG=other;CLNDBN=Alcohol_dependence;CLNREVSTAT=single;CLNACC=RCV000019811.1;CLNDSDB=MedGen:OMIM;CLNDSDBID=CN028882:103780	5.86471
1066	5	7868030	7868030	T	C	exonic	FASTKD3	NA	nonsynonymous SNV	FASTKD3:NM_024091:exon2:c.A167G:p.K56R	exonic	ENSG00000124279	NA	nonsynonymous SNV	ENSG00000124279:ENST00000507036:exon1:c.A167G:p.K56R,ENSG00000124279:ENST00000264669:exon2:c.A167G:p.K56R,ENSG00000124279:ENST00000504695:exon2:c.A167G:p.K56R,ENSG00000124279:ENST00000507572:exon2:c.A116G:p.K39R	NA	NA	5p15.31	Score=873;Name=V$RORA1_01	NA	NA	NA	rs2966952	0.81	0.81	0.817	0.821486	0.8241	0.6716	0.8458	0.9349	0.8027	0.83	0.66	0.85	0.94	0.8201	0.94	1	T	0.0	B	0.0	B	0.377	N	1.000	P	-2.075	N	2.2	T	-0.976	T	0.000	T	0.113	-2.142	0.005	0.974	0.061	-0.633	5.499	-2.142342	NA	1	0.824535	0.892419	NA	0.841	NA	5.8645984
1066	11	554166	554166	C	G	exonic	LRRC56	NA	nonsynonymous SNV	LRRC56:NM_198075:exon14:c.C1519G:p.R507G	exonic	ENSG00000161328	NA	nonsynonymous SNV	ENSG00000161328:ENST00000270115:exon14:c.C1519G:p.R507G	NA	NA	11p15.5	Score=807;Name=V$PAX5_02	NA	NA	NA	rs10902170	0.8	0.8	0.796	0.79393	0.829	0.874	0.8718	0.7103	0.7331	0.81	0.85	0.84	0.7	0.8169	0.85	1	T	0.0	B	0.0	B	0.831	N	1.000	P	-0.805	N	3.21	T	-1.010	T	0.000	T	0.006	-2.978	0.001	-1.47	-0.556	0.149	5.062	-2.978478	NA	1	0.823057	0.71848	NA	0.659	NA	5.8643764
1066	5	135391374	135391374	C	T	exonic	TGFBI	NA	synonymous SNV	TGFBI:NM_000358:exon11:c.C1416T:p.L472L	exonic	ENSG00000120708	NA	synonymous SNV	ENSG00000120708:ENST00000305126:exon11:c.C1416T:p.L472L,ENSG00000120708:ENST00000442011:exon11:c.C1416T:p.L472L	Score=531;Name=lod=191	NA	5q31.1	NA	NA	NA	NA	rs1133170	0.26	0.26	0.269	0.280152	0.2565	0.247	0.2133	0.3011	0.3579	0.26	0.26	0.19	0.3	0.2787	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.472303	2.472303	NA	0.267241	0.307492	NA	0.225	NA	5.8642256
1066	15	51520206	51520206	T	C	intronic	CYP19A1	NA	NA	NA	ncRNA_intronic	ENSG00000259240	NA	NA	NA	NA	NA	15q21.2	NA	Name=BATF	Name=38	NA	rs1065778	0.37	0.37	0.363	0.325879	0.4692	0.4385	0.3184	0.1596	0.2924	0.48	0.45	0.33	0.13	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.391711	NA	NA	NA	NA	ID=COSN164938;OCCURENCE=1(breast)	0.283	NA	5.8641333
1066	15	78189478	78189478	C	A	intergenic	LOC253044,LOC645752	dist=247897;dist=17081	NA	NA	ncRNA_exonic	ENSG00000260139	NA	NA	NA	Score=505;Name=lod=151	NA	15q24.3	Score=950;Name=V$AP4_Q5	NA	NA	NA	rs28403366	0.1	0.1	0.093	0.086262	0.1362	0.0367	0.0706	0.1044	0.0726	0.14	0.04	0.08	0.12	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.118767	NA	NA	NA	NA	NA	0.058	NA	5.8638
1066	16	84796603	84796603	A	G	exonic	USP10	NA	synonymous SNV	USP10:NM_005153:exon9:c.A1563G:p.Q521Q,USP10:NM_001272075:exon10:c.A1575G:p.Q525Q	exonic	ENSG00000103194	NA	synonymous SNV	ENSG00000103194:ENST00000570053:exon3:c.A99G:p.Q33Q,ENSG00000103194:ENST00000569038:exon8:c.A438G:p.Q146Q,ENSG00000103194:ENST00000219473:exon9:c.A1563G:p.Q521Q,ENSG00000103194:ENST00000570191:exon10:c.A1575G:p.Q525Q	Score=469;Name=lod=107	NA	16q24.1	NA	NA	NA	NA	rs12932018	0.26	0.26	0.218	0.26258	0.2525	0.4087	0.428	0.053	0.2883	0.26	0.37	0.36	0.05	0.2835	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.023022	NA	NA	0.267386	0.089352	NA	0.152	NA	5.8632806
1066	7	149031386	149031386	C	T	intergenic	LOC155060,ZNF777	dist=36983;dist=97068	NA	NA	ncRNA_exonic	ENSG00000215311	NA	NA	NA	Score=518;Name=lod=170	NA	7q36.1	NA	Name=CTCF	NA	NA	rs145799080	0.09	0.09	0.077	0.0740815	0.1372	NA	0.1167	0.0983	0.0225	0.14	NA	0.14	0.09	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.392659	1.392659	NA	NA	NA	NA	0.123	NA	5.8628
1066	11	118451901	118451901	T	C	intronic	ARCN1	NA	NA	NA	intronic	ENSG00000095139	NA	NA	NA	NA	NA	11q23.3	NA	Name=c-Jun	Name=18	NA	rs11216911	0.24	0.24	0.227	0.279553	0.1372	0.5823	0.0821	0.2027	0.3579	0.14	0.53	0.09	0.18	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.299278	NA	NA	NA	NA	NA	0.196	NA	5.8628
1066	8	141551407	141551407	G	A	exonic	AGO2	NA	synonymous SNV	AGO2:NM_001164623:exon15:c.C1890T:p.R630R,AGO2:NM_012154:exon15:c.C1890T:p.R630R	exonic	ENSG00000123908	NA	synonymous SNV	ENSG00000123908:ENST00000220592:exon15:c.C1890T:p.R630R,ENSG00000123908:ENST00000519980:exon15:c.C1890T:p.R630R	NA	NA	8q24.3	Score=806;Name=V$PAX4_01	NA	NA	NA	rs2293939	0.25	0.25	0.223	0.227436	0.2684	0.3581	0.281	0.0567	0.2434	0.26	0.36	0.27	0.08	0.2677	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.123631	NA	NA	0.267791	0.094417	NA	0.13	NA	5.8627756
1066	2	208811097	208811097	C	T	exonic	PLEKHM3	NA	synonymous SNV	PLEKHM3:NM_001080475:exon4:c.G1686A:p.K562K	exonic	ENSG00000178385	NA	synonymous SNV	ENSG00000178385:ENST00000389247:exon4:c.G1686A:p.K562K,ENSG00000178385:ENST00000427836:exon4:c.G1686A:p.K562K,ENSG00000178385:ENST00000457206:exon4:c.G1686A:p.K562K	Score=417;Name=lod=66	NA	2q33.3	NA	NA	NA	NA	rs10932215	0.56	0.56	0.549	0.543131	0.6113	0.4038	0.4986	0.7073	0.4264	0.6	0.39	0.53	0.71	0.5626	0.71	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.965	T	0.000	T	.	0.686	7.665	1.64	-0.096	0.061	11.425	0.685683	NA	NA	0.630282	0.687368	NA	0.478	NA	5.8624846
1066	2	3392075	3392075	T	C	exonic	TRAPPC12	NA	synonymous SNV	TRAPPC12:NM_016030:exon2:c.T681C:p.F227F	exonic	ENSG00000171853	NA	synonymous SNV	ENSG00000171853:ENST00000324266:exon2:c.T681C:p.F227F,ENSG00000171853:ENST00000382110:exon2:c.T681C:p.F227F	Score=479;Name=lod=118	Name=Obesity-related traits	2p25.3	NA	NA	NA	NA	rs10865541	0.64	0.64	0.653	0.653754	0.6183	0.6806	0.5	0.7254	0.6748	0.62	0.68	0.54	0.71	0.603	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.158554	NA	NA	0.582907	0.696096	ID=COSM442850;OCCURENCE=1(breast)	0.37	NA	5.8624596
1066	10	115375528	115375528	C	A	exonic	NRAP	NA	synonymous SNV	NRAP:NM_006175:exon26:c.G2916T:p.P972P,NRAP:NM_001261463:exon27:c.G3021T:p.P1007P,NRAP:NM_198060:exon27:c.G3021T:p.P1007P	exonic	ENSG00000197893	NA	synonymous SNV	ENSG00000197893:ENST00000360478:exon26:c.G2916T:p.P972P,ENSG00000197893:ENST00000369360:exon26:c.G2940T:p.P980P,ENSG00000197893:ENST00000359988:exon27:c.G3021T:p.P1007P,ENSG00000197893:ENST00000369358:exon27:c.G3045T:p.P1015P	Score=278;Name=lod=18	NA	10q25.3	NA	NA	NA	NA	rs11196397	0.27	0.27	0.253	0.227636	0.2783	0.3958	0.2507	0.0802	0.1851	0.26	0.42	0.28	0.09	0.2565	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.51719	NA	NA	0.269535	0.102133	ID=COSM147045;OCCURENCE=1(stomach)	0.203	NA	5.8623316
1066	14	77951124	77951124	C	T	exonic	ISM2	NA	nonsynonymous SNV	ISM2:NM_182509:exon2:c.G280A:p.A94T,ISM2:NM_199296:exon2:c.G280A:p.A94T	exonic	ENSG00000100593	NA	nonsynonymous SNV	ENSG00000100593:ENST00000342219:exon2:c.G280A:p.A94T,ENSG00000100593:ENST00000412904:exon2:c.G280A:p.A94T,ENSG00000100593:ENST00000493585:exon2:c.G280A:p.A94T,ENSG00000100593:ENST00000554801:exon2:c.G280A:p.A94T,ENSG00000100593:ENST00000393684:exon3:c.G16A:p.A6T	NA	NA	14q24.3	NA	NA	NA	NA	rs3742728	0.61	0.61	0.587	0.589657	0.6481	0.9494	0.647	0.1467	0.7168	0.64	0.95	0.62	0.16	0.6567	0.95	0.81	T	0.772	P	0.236	B	.	.	1.000	P	1.445	L	2.2	T	-0.861	T	0.000	T	0.067	1.084	9.424	0.674	0.157	-0.600	4.820	1.083844	NA	0.14	0.66686	0.237857	NA	0.522	NA	5.8616734
1066	9	90503451	90503451	G	A	exonic	SPATA31E1	NA	nonsynonymous SNV	SPATA31E1:NM_178828:exon4:c.G4049A:p.R1350H	exonic	ENSG00000177992	NA	nonsynonymous SNV	ENSG00000177992:ENST00000325643:exon4:c.G4049A:p.R1350H	NA	NA	9q22.1	NA	NA	NA	NA	rs11142017	0.45	0.45	0.435	0.460064	0.5179	0.3373	0.4049	0.5151	0.4918	0.51	0.34	0.43	0.5	0.4626	0.51	0.14	T	0.0	B	0.0	B	0.078	N	1.000	P	-0.895	N	3.83	T	-0.936	T	0.000	T	0.018	0.627	7.37	1.25	-0.023	0.117	2.917	0.62661	NA	0.1	0.491395	0.497503	NA	0.449	NA	5.8614384
1066	5	55406952	55406952	T	C	exonic	ANKRD55	NA	synonymous SNV	ANKRD55:NM_024669:exon10:c.A1623G:p.P541P	exonic	ENSG00000164512	NA	synonymous SNV	ENSG00000164512:ENST00000434982:exon2:c.A759G:p.P253P,ENSG00000164512:ENST00000504958:exon8:c.A1494G:p.P498P,ENSG00000164512:ENST00000341048:exon10:c.A1623G:p.P541P	NA	NA	5q11.2	NA	Name=TAL1_(SC-12984),GATA-2,eGFP-GATA2,CCNT2	NA	NA	rs321775	0.23	0.23	0.208	0.217652	0.2813	0.3065	0.1311	0.0862	0.2996	0.28	0.31	0.18	0.09	0.2546	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.227127	NA	NA	0.269419	0.115524	ID=COSM149840;OCCURENCE=1(stomach)	0.123	NA	5.8613476
1066	8	69009268	69009268	C	T	exonic	PREX2	NA	synonymous SNV	PREX2:NM_024870:exon22:c.C2385T:p.F795F,PREX2:NM_025170:exon22:c.C2385T:p.F795F	exonic	ENSG00000046889	NA	synonymous SNV	ENSG00000046889:ENST00000288368:exon22:c.C2385T:p.F795F	Score=543;Name=lod=214	NA	8q13.2	NA	NA	NA	NA	rs3812458	0.26	0.26	0.26	0.266174	0.2783	0.1885	0.2435	0.2731	0.3405	0.3	0.22	0.23	0.27	0.2637	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.109126	NA	NA	0.263953	0.272583	NA	0.225	NA	5.8607136
1066	17	15215660	15215660	T	C	exonic	TEKT3	NA	synonymous SNV	TEKT3:NM_031898:exon7:c.A1017G:p.Q339Q	exonic	ENSG00000125409	NA	synonymous SNV	ENSG00000125409:ENST00000338696:exon6:c.A1017G:p.Q339Q,ENSG00000125409:ENST00000395930:exon7:c.A1017G:p.Q339Q,ENSG00000125409:ENST00000539245:exon8:c.A519G:p.Q173Q	Score=526;Name=lod=183	NA	17p12	NA	NA	NA	NA	rs2286516	0.24	0.24	0.24	0.234425	0.2793	0.252	0.2896	0.1445	0.2526	0.28	0.24	0.3	0.15	0.2684	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.069034	NA	NA	0.258605	0.168861	NA	0.254	NA	5.8603616
1066	8	142228809	142228809	T	C	exonic	SLC45A4	NA	synonymous SNV	SLC45A4:NM_001080431:exon4:c.A777G:p.A259A	exonic	ENSG00000022567	NA	synonymous SNV	ENSG00000022567:ENST00000024061:exon4:c.A777G:p.A259A,ENSG00000022567:ENST00000433583:exon4:c.A756G:p.A252A,ENSG00000022567:ENST00000517878:exon4:c.A930G:p.A310A,ENSG00000022567:ENST00000519067:exon4:c.A777G:p.A259A	Score=417;Name=lod=66	NA	8q24.3	Score=745;Name=V$TCF11MAFG_01	NA	NA	NA	rs753779	0.7	0.7	0.682	0.711462	0.6024	0.8194	0.5879	0.8238	0.6483	0.58	0.82	0.65	0.8	0.6317	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.46769	NA	NA	0.572674	0.807762	NA	0.601	NA	5.8598926
1066	19	41932612	41932612	C	T	exonic	B3GNT8	NA	synonymous SNV	B3GNT8:NM_198540:exon3:c.G72A:p.E24E	exonic	ENSG00000177191	NA	synonymous SNV	ENSG00000177191:ENST00000321702:exon3:c.G72A:p.E24E	Score=542;Name=lod=213	NA	19q13.2	Score=839;Name=V$CDPCR1_01	NA	NA	NA	rs284663	0.61	0.61	0.614	0.617412	0.5934	0.4266	0.487	0.8631	0.5992	0.58	0.46	0.57	0.86	0.6022	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.218608	NA	NA	0.611189	0.817068	NA	0.681	NA	5.8598776
1066	12	120800696	120800696	T	A	intronic	MSI1	NA	NA	NA	intronic	ENSG00000135097	NA	NA	NA	NA	NA	12q24.31	NA	Name=ZNF263	Name=6	NA	rs1557769	0.15	0.15	0.142	0.157548	0.1402	0.0774	0.1268	0.2413	0.1667	0.15	0.06	0.13	0.25	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.055344	2.055344	NA	NA	NA	NA	0.225	NA	5.8598
1066	12	47182279	47182279	C	T	intronic	SLC38A4	NA	NA	NA	intronic	ENSG00000139209	NA	NA	NA	NA	NA	12q13.11	NA	Name=STAT3,c-Fos,FOSL2,FOXA1_(SC-101058)	Name=65	NA	rs2302855	0.11	0.11	0.086	0.0932508	0.0298	0.244	0.2147	0.0129	0.0256	0.03	0.25	0.21	0.02	0.0764	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.401984	NA	NA	0.034186	0.027488	NA	0.087	NA	5.859614
1066	16	84270381	84270381	G	A	exonic	KCNG4	NA	synonymous SNV	KCNG4:NM_172347:exon2:c.C711T:p.S237S	exonic	ENSG00000168418	NA	synonymous SNV	ENSG00000168418:ENST00000308251:exon2:c.C711T:p.S237S,ENSG00000168418:ENST00000568181:exon2:c.C711T:p.S237S	Score=518;Name=lod=170	NA	16q24.1	Score=744;Name=V$SEF1_C	NA	NA	NA	rs244811	0.57	0.57	0.583	0.596845	0.6183	0.4643	0.5648	0.6747	0.6288	0.62	0.41	0.59	0.66	0.6058	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.184842	NA	NA	0.583043	0.6525	NA	0.688	NA	5.8595236
1066	19	41889748	41889748	T	C	exonic	TMEM91	NA	synonymous SNV	TMEM91:NM_001098821:exon4:c.T489C:p.A163A	exonic	ENSG00000142046	NA	synonymous SNV	ENSG00000142046:ENST00000392002:exon4:c.T489C:p.A163A	Score=489;Name=lod=129	NA	19q13.2	NA	Name=Pol2	NA	NA	rs12602	0.61	0.61	0.59	0.618411	0.5924	0.4306	0.4784	0.8691	0.5992	0.58	0.46	0.56	0.87	0.6011	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.56138	1.56138	NA	0.613702	0.825627	NA	0.688	NA	5.8594646
1066	9	33442952	33442952	G	A	exonic	AQP3	NA	synonymous SNV	AQP3:NM_004925:exon4:c.C390T:p.F130F	exonic	ENSG00000165272	NA	synonymous SNV	ENSG00000165272:ENST00000297991:exon4:c.C390T:p.F130F	NA	NA	9p13.3	Score=817;Name=V$GFI1_01	Name=TBP	NA	NA	rs2228332	0.67	0.67	0.676	0.658746	0.5934	0.6875	0.6859	0.7572	0.544	0.61	0.7	0.61	0.76	0.6276	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.368109	NA	NA	0.586279	0.744893	NA	0.725	NA	5.8593876
1066	6	38771168	38771168	T	C	intronic	DNAH8	NA	NA	NA	intronic	ENSG00000124721	NA	NA	NA	NA	NA	6p21.2	NA	Name=GATA3_(SC-268),FOXA1_(C-20),p300	Name=5	NA	rs55939633	0.15	0.15	0.118	0.130791	0.1412	0.127	0.2464	0.093	0.093	0.15	0.13	0.22	0.11	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.256689	NA	NA	NA	NA	NA	0.21	NA	5.8588
1066	16	16244174	16244174	T	C	intronic	ABCC6	NA	NA	NA	intronic	ENSG00000091262	NA	NA	NA	NA	NA	16p13.11	NA	Name=NRSF	Name=82	NA	rs212098	0.15	0.15	0.136	0.127396	0.1412	0.2192	0.1354	0.0923	0.0603	0.14	0.24	0.15	0.09	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.019828	NA	NA	NA	NA	NA	0.101	NA	5.8588
1066	17	73513867	73513867	G	A	intronic	TSEN54	NA	NA	NA	intronic	ENSG00000182173	NA	NA	NA	NA	NA	17q25.1	NA	Name=CTCF,EBF1_(C-8),c-Myc	Name=43	NA	rs58787501	0.1	0.1	0.101	0.0938498	0.1412	0.0298	0.0865	0.0998	0.1084	0.14	0.03	0.13	0.11	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.043437	NA	NA	NA	NA	NA	0.196	NA	5.8588
1066	19	20003109	20003109	A	G	exonic	ZNF253	NA	synonymous SNV	ZNF253:NM_021047:exon4:c.A1053G:p.L351L	exonic	ENSG00000256771	NA	synonymous SNV	ENSG00000256771:ENST00000355650:exon2:c.A825G:p.L275L,ENSG00000256771:ENST00000589717:exon4:c.A1053G:p.L351L	NA	NA	19p12	NA	Name=ZNF274	NA	NA	rs8106559	0.47	0.47	0.471	0.483626	0.2376	0.6815	0.379	0.6762	0.3466	0.24	0.7	0.33	0.64	0.3269	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.791645	NA	NA	0.243925	0.609217	NA	0.449	NA	5.8582416
1066	4	16362753	16362753	G	A	intergenic	TAPT1-AS1,LDB2	dist=102943;dist=140412	NA	NA	ncRNA_exonic	ENSG00000249506	NA	NA	NA	Score=816;Name=lod=2762	NA	4p15.32	NA	Name=HA-E2F1	NA	NA	rs16893388	0.18	0.18	0.153	0.192292	0.1421	0.0456	0.2089	0.354	0.1646	0.15	0.05	0.21	0.34	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.048623	NA	NA	NA	NA	NA	0.116	NA	5.8579
1066	12	133423695	133423695	A	G	exonic	CHFR	NA	synonymous SNV	CHFR:NM_001161347:exon13:c.T1429C:p.L477L,CHFR:NM_001161344:exon15:c.T1705C:p.L569L,CHFR:NM_001161345:exon15:c.T1702C:p.L568L,CHFR:NM_001161346:exon15:c.T1669C:p.L557L,CHFR:NM_018223:exon15:c.T1582C:p.L528L	exonic	ENSG00000072609	NA	synonymous SNV	ENSG00000072609:ENST00000537522:exon7:c.T571C:p.L191L,ENSG00000072609:ENST00000443047:exon13:c.T1429C:p.L477L,ENSG00000072609:ENST00000315585:exon15:c.T1582C:p.L528L,ENSG00000072609:ENST00000432561:exon15:c.T1705C:p.L569L,ENSG00000072609:ENST00000450056:exon15:c.T1669C:p.L557L,ENSG00000072609:ENST00000266880:exon16:c.T1702C:p.L568L	Score=493;Name=lod=135	NA	12q24.33	NA	NA	NA	NA	rs2306537	0.18	0.18	0.162	0.142372	0.2803	0.1736	0.1571	0.0106	0.136	0.29	0.18	0.16	0.02	0.2299	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.565141	1.565141	NA	0.298721	0.050613	NA	0.167	NA	5.8577456
1066	22	43619200	43619200	G	A	exonic	SCUBE1	NA	synonymous SNV	SCUBE1:NM_173050:exon11:c.C1230T:p.R410R	exonic	ENSG00000159307	NA	synonymous SNV	ENSG00000159307:ENST00000360835:exon11:c.C1230T:p.R410R	Score=284;Name=lod=19	NA	22q13.2	NA	NA	NA	NA	rs6003114	0.2	0.2	0.209	0.223642	0.2505	0.0327	0.2939	0.236	0.3262	0.25	0.04	0.28	0.23	0.2749	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.864869	NA	NA	0.283721	0.264412	NA	0.341	NA	5.8575456
1066	12	123345736	123345736	C	G	exonic	HIP1R	NA	synonymous SNV	HIP1R:NM_003959:exon30:c.C2949G:p.T983T	exonic	ENSG00000130787	NA	synonymous SNV	ENSG00000130787:ENST00000253083:exon30:c.C2949G:p.T983T	Score=546;Name=lod=220	NA	12q24.31	Score=892;Name=V$ZID_01	NA	NA	NA	rs10847910	0.91	0.91	0.893	0.887979	0.9364	0.9901	0.964	0.7617	0.8497	0.93	0.99	0.95	0.75	0.9225	0.99	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.026	T	0.000	T	.	1.422	10.69	-1.11	-0.087	-0.314	3.813	1.421643	1.421643	NA	0.950814	0.797322	NA	0.891	NA	5.8569526
1066	22	24917852	24917852	G	A	intronic	UPB1	NA	NA	NA	intronic	ENSG00000100024	NA	NA	NA	NA	NA	22q11.23	NA	Name=CTCF_(C-20),c-Fos,ZNF263,CTCF_(SC-5916),NANOG_(SC-33759),JunD,CTCF,p300,GR,ELF1_(SC-631),Rad21,GATA3_(SC-268),SP1,SMC3_(ab9263),Znf143_(16618-1-AP)	Name=140	NA	rs2232868	0.12	0.12	0.102	0.153155	0.1431	0.0645	0.2003	0.1286	0.2546	0.13	0.07	0.18	0.11	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.775944	NA	NA	NA	NA	NA	0.138	NA	5.8569
1066	22	37578214	37578214	T	C	UTR3	C1QTNF6	NM_182486:c.*14A>G,NM_031910:c.*14A>G	NA	NA	ncRNA_UTR3	ENSG00000133466	NA	NA	NA	NA	NA	22q12.3	NA	Name=EBF,CTCF,Rad21	Name=9	NA	rs916235	0.3	0.3	0.285	0.278355	0.2127	0.4673	0.1859	0.2685	0.2301	0.21	0.5	0.19	0.26	0.2331	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.365617	NA	NA	0.197674	0.265093	NA	0.261	NA	5.856526
1066	12	9268473	9268473	A	C	UTR5	A2M	NM_000014:c.-28T>G	NA	NA	UTR5	ENSG00000175899	ENST00000318602:c.-28T>G	NA	NA	NA	NA	12p13.31	NA	Name=TBP,HEY1,Sin3Ak-20,HDAC2_(SC-6296),FOXA1_(C-20),HNF4A_(H-171),p300,HNF4G_(SC-6558),ELF1_(SC-631),FOXA2_(SC-6554),Pol2,TCF4,TAF1	NA	NA	rs226380	0.46	0.46	0.467	0.473243	0.497	0.124	0.5115	0.8018	0.3374	0.5	0.12	0.52	0.77	0.4753	0.77	1	T	.	.	.	.	.	.	0.981	P	.	.	.	.	-0.937	T	0.000	T	.	0.775	8.092	-2.01	-0.637	-0.299	0.424	0.77467	NA	NA	0.504714	0.759907	NA	0.58	NA	5.8563194
1066	17	37351285	37351285	T	C	intronic	CACNB1	NA	NA	NA	intronic	ENSG00000067191	NA	NA	NA	NA	NA	17q12	NA	Name=JunD	Name=3	NA	rs534012	0.13	0.13	0.084	0.0750799	0.1441	0.0595	0.0994	0.0333	0.0593	0.18	0.09	0.14	0.07	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.884778	NA	NA	NA	NA	NA	0.109	NA	5.8559
1066	21	24781262	24781262	T	A	intergenic	D21S2088E,LOC339622	dist=24106;dist=1431602	NA	NA	ncRNA_exonic	ENSG00000237569	NA	NA	NA	Score=782;Name=lod=2014	NA	21q21.2	NA	Name=NRSF	NA	NA	rs2298407	0.21	0.21	0.221	0.215256	0.1441	0.2887	0.1383	0.261	0.2055	0.15	0.28	0.14	0.27	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.928456	NA	NA	NA	NA	NA	0.312	NA	5.8559
1066	5	145477855	145477855	T	C	exonic	PLAC8L1	NA	synonymous SNV	PLAC8L1:NM_001029869:exon2:c.A120G:p.R40R	exonic	ENSG00000173261	NA	synonymous SNV	ENSG00000173261:ENST00000311450:exon2:c.A120G:p.R40R,ENSG00000173261:ENST00000512998:exon2:c.A120G:p.R40R	Score=265;Name=lod=16	NA	5q32	NA	NA	NA	NA	rs6877277	0.23	0.23	0.2	0.217652	0.2545	0.1984	0.3991	0.1324	0.1861	0.25	0.2	0.32	0.15	0.276	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.550533	1.550533	NA	0.280581	0.17862	ID=COSM149959;OCCURENCE=1(stomach)	0.297	NA	5.8555856
1066	11	123598941	123598941	T	C	exonic	ZNF202	NA	synonymous SNV	ZNF202:NM_003455:exon7:c.A732G:p.V244V	exonic	ENSG00000166261	NA	synonymous SNV	ENSG00000166261:ENST00000529691:exon5:c.A732G:p.V244V,ENSG00000166261:ENST00000336139:exon6:c.A732G:p.V244V,ENSG00000166261:ENST00000530393:exon7:c.A732G:p.V244V	NA	NA	11q24.1	Score=704;Name=V$HOX13_01	NA	NA	NA	rs2282644	0.23	0.23	0.203	0.229233	0.2694	0.3552	0.2968	0.0159	0.2986	0.28	0.32	0.25	0.03	0.2613	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.10827	NA	NA	0.280414	0.059946	NA	0.326	NA	5.8555526
1067	15	78953740	78953740	G	A	intergenic	CHRNB4,LOC646938	dist=20153;dist=90639	NA	NA	ncRNA_exonic	ENSG00000213307,ENSG00000261303	NA	NA	NA	Score=488;Name=lod=128	NA	15q25.1	NA	Name=YY1	NA	NA	rs7163204	0.22	0.22	0.18	0.257987	0.1451	0.2341	0.4366	0.1679	0.3937	0.15	0.24	0.36	0.19	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.403466	NA	NA	NA	NA	NA	0.21	NA	5.8549
1067	17	17948475	17948475	G	A	exonic	GID4	NA	synonymous SNV	GID4:NM_024052:exon2:c.G453A:p.G151G	exonic	ENSG00000141034	NA	synonymous SNV	ENSG00000141034:ENST00000268719:exon2:c.G453A:p.G151G,ENSG00000141034:ENST00000376345:exon2:c.G453A:p.G151G	Score=624;Name=lod=458	NA	17p11.2	Score=862;Name=V$GR_Q6	NA	NA	NA	rs2955355	0.42	0.42	0.418	0.366014	0.6233	0.0952	0.4625	0.4327	0.2219	0.63	0.08	0.52	0.44	0.5233	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.112098	NA	NA	0.66593	0.463232	NA	0.514	NA	5.8541366
1067	3	16475256	16475256	A	G	intronic	RFTN1	NA	NA	NA	intronic	ENSG00000131378	NA	NA	NA	NA	NA	3p24.3	NA	Name=Oct-2,PAX5-C20,PAX5-N19,ZEB1_(SC-25388),NFKB,CHD2_(N-1250),TBP,p300,TCF12,POU2F2,EBF,MEF2A,IRF4_(M-17),Pol2-4H8,BCL11A,PU.1,SP1,NRSF	Name=5	NA	rs2303851	0.1	0.1	0.092	0.0748802	0.1461	0.1171	0.0836	0.0076	0.0429	0.14	0.13	0.09	0.01	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.786694	NA	NA	NA	NA	NA	0.188	NA	5.8539
1067	12	11461292	11461292	C	G	exonic	PRB4	NA	nonsynonymous SNV	PRB4:NM_002723:exon3:c.G625C:p.A209P,PRB4:NM_001261399:exon4:c.G418C:p.A140P	exonic	ENSG00000230657	NA	nonsynonymous SNV	ENSG00000230657:ENST00000279575:exon3:c.G625C:p.A209P,ENSG00000230657:ENST00000535904:exon3:c.G625C:p.A209P,ENSG00000230657:ENST00000445719:exon4:c.G418C:p.A140P	NA	NA	12p13.2	NA	NA	NA	NA	rs1052808	0.77	0.77	0.747	0.754992	0.8499	0.8075	0.8429	0.6218	0.7209	0.85	0.8	0.84	0.58	0.8033	0.85	0.95	T	0.0	B	0.0	B	.	.	1.000	P	-0.55	N	3.79	T	-1.034	T	0.000	T	0.087	-0.693	0.996	-1.83	-0.596	-2.515	6.477	-0.692536	NA	0.29	0.826512	0.679074	NA	0.616	NA	5.8536214
1067	11	64697950	64697950	C	T	intronic	PPP2R5B	NA	NA	NA	intronic	ENSG00000068971	NA	NA	NA	Score=542;Name=lod=213	NA	11q13.1	Score=804;Name=V$BRN2_01	NA	NA	NA	rs111934356	0.03	0.03	0.036	0.0371406	0.0497	NA	0.0389	0.0416	0.0552	0.05	NA	0.04	0.04	0.0431	0.054	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.792659	1.792659	NA	0.053642	0.035666	NA	0.022	NA	5.853558
1067	22	41075695	41075695	C	T	exonic	MCHR1	NA	synonymous SNV	MCHR1:NM_005297:exon1:c.C246T:p.N82N	exonic	ENSG00000128285	NA	synonymous SNV	ENSG00000128285:ENST00000249016:exon1:c.C246T:p.N82N,ENSG00000128285:ENST00000381433:exon1:c.C246T:p.N82N	Score=441;Name=lod=83	NA	22q13.2	NA	Name=Egr-1	NA	NA	rs133073	0.67	0.67	0.656	0.617612	0.6054	0.9792	0.3991	0.5756	0.4693	0.59	0.99	0.42	0.59	0.5956	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.17125	NA	NA	0.612209	0.57626	NA	0.565	NA	5.8534576
1067	13	46276503	46276503	G	C	UTR5	SPERT	NM_152719:c.-23G>C	NA	NA	UTR5	ENSG00000174015	ENST00000310521:c.-23G>C,ENST00000533564:c.-23G>C	NA	NA	NA	NA	13q14.13	NA	Name=Pol2,Pol2-4H8	Name=5	NA	rs872556	0.13	0.13	0.134	0.125	0.1779	0.0089	0.1182	0.174	0.1288	0.17	0.0017	0.13	0.2	0.1421	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.767348	1.767348	NA	0.160233	0.196323	NA	0.101	NA	5.8531004
1067	9	124083471	124083471	C	T	intronic	GSN	NA	NA	NA	intronic	ENSG00000148180	NA	NA	NA	NA	NA	9q33.2	NA	Name=CTCF	Name=43	NA	rs16910509	0.07	0.07	0.06	0.0623003	0.1471	0.0099	0.0821	0.0265	0.0634	0.13	0.01	0.1	0.03	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.466528	NA	NA	NA	NA	NA	0.022	NA	5.8529
1067	8	28574803	28574803	G	A	exonic	EXTL3	NA	synonymous SNV	EXTL3:NM_001440:exon3:c.G1227A:p.P409P	exonic	ENSG00000012232	NA	synonymous SNV	ENSG00000012232:ENST00000220562:exon3:c.G1227A:p.P409P,ENSG00000012232:ENST00000523149:exon3:c.G75A:p.P25P	Score=389;Name=lod=51	NA	8p21.1	NA	NA	NA	NA	rs240951	0.27	0.27	0.266	0.26238	0.2813	0.3472	0.2738	0.1876	0.2485	0.28	0.34	0.3	0.16	0.2721	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.107481	NA	NA	0.261395	0.208806	NA	0.464	NA	5.8518716
1067	2	133542545	133542545	G	A	exonic	NCKAP5	NA	synonymous SNV	NCKAP5:NM_207363:exon14:c.C1839T:p.S613S	exonic	ENSG00000176771	NA	synonymous SNV	ENSG00000176771:ENST00000317721:exon12:c.C1839T:p.S613S,ENSG00000176771:ENST00000409261:exon14:c.C1839T:p.S613S	NA	NA	2q21.2	Score=796;Name=V$OLF1_01	NA	NA	NA	rs10191147	0.36	0.36	0.397	0.353634	0.2555	0.494	0.2997	0.4395	0.2321	0.24	0.51	0.31	0.42	0.2961	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.736875	NA	NA	0.264144	0.415341	NA	0.362	NA	5.8509226
1067	6	29545494	29545494	C	G	intergenic	UBD,SNORD32B	dist=17792;dist=4535	NA	NA	ncRNA_exonic	ENSG00000227609	NA	NA	NA	NA	NA	6p22.1	NA	Name=JunD	Name=2	NA	rs34927823	0.15	0.15	0.135	0.117013	0.1491	0.2391	0.1628	0.0053	0.0767	0.15	0.24	0.16	0.01	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.196434	NA	NA	NA	NA	NA	0.145	NA	5.8509
1067	17	38020419	38020419	T	C	UTR5	IKZF3	NM_183231:c.-40A>G,NM_183229:c.-40A>G,NM_183228:c.-40A>G,NM_012481:c.-40A>G,NM_001257410:c.-40A>G,NM_001257409:c.-40A>G,NM_001257408:c.-40A>G,NM_183232:c.-40A>G,NM_183230:c.-40A>G,NM_001257414:c.-40A>G,NM_001257413:c.-40A>G,NM_001257412:c.-40A>G,NM_001257411:c.-40A>G	NA	NA	UTR5	ENSG00000161405	ENST00000346872:c.-40A>G,ENST00000377952:c.-40A>G,ENST00000535189:c.-40A>G,ENST00000377958:c.-40A>G,ENST00000377944:c.-40A>G,ENST00000394189:c.-40A>G,ENST00000377945:c.-40A>G,ENST00000293068:c.-40A>G,ENST00000348427:c.-40A>G,ENST00000439167:c.-40A>G	NA	NA	Score=433;Name=lod=77	NA	17q12	NA	Name=POU2F2,USF2,E2F6_(H-50),TAF1,BCL11A,YY1_(C-20),E2F6,USF1_(SC-8983),MEF2A,NRSF,Pol2,SMC3_(ab9263),MEF2C_(SC-13268),Oct-2,Max,CTCF,Pbx3,HA-E2F1,Sin3Ak-20,Pol2-4H8,ZNF263,YY1,PAX5-C20,SETDB1,CCNT2,SUZ12,c-Myc,BCL3,NFKB,USF-1,Nrf1,TCF12	Name=68	NA	rs1453559	0.48	0.48	0.445	0.457069	0.5189	0.2827	0.4236	0.6392	0.3507	0.53	0.31	0.44	0.63	0.4716	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.284863	1.284863	NA	0.492252	0.595336	NA	0.486	NA	5.8505814
1067	11	7818190	7818190	C	T	exonic	OR5P2	NA	synonymous SNV	OR5P2:NM_153444:exon1:c.G300A:p.A100A	exonic	ENSG00000183303	NA	synonymous SNV	ENSG00000183303:ENST00000329434:exon1:c.G300A:p.A100A	NA	NA	11p15.4	NA	Name=MafK_(SC-477),MafF_(M8194),MafK_(ab50322)	NA	NA	rs73406607	0.27	0.27	0.265	0.236621	0.2763	0.128	0.2911	0.348	0.1186	0.29	0.15	0.28	0.37	0.2574	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.233419	NA	NA	0.282386	0.32557	ID=COSM1559365;OCCURENCE=2(central_nervous_system)	0.239	NA	5.8505806
1067	13	23905711	23905711	A	G	exonic	SACS	NA	synonymous SNV	SACS:NM_014363:exon10:c.T12304C:p.L4102L	exonic	ENSG00000151835	NA	synonymous SNV	ENSG00000151835:ENST00000402364:exon8:c.T10054C:p.L3352L,ENSG00000151835:ENST00000382292:exon9:c.T12304C:p.L4102L,ENSG00000151835:ENST00000382298:exon10:c.T12304C:p.L4102L	NA	NA	13q12.12	NA	NA	NA	NA	rs2737699	0.27	0.27	0.233	0.258387	0.2783	0.3145	0.3617	0.053	0.3845	0.28	0.36	0.36	0.06	0.278	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.811637	NA	NA	0.259828	0.096686	NA	0.152	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118230.2;CLNDSDB=.;CLNDSDBID=.	5.8505386
1067	11	7817665	7817665	T	C	exonic	OR5P2	NA	synonymous SNV	OR5P2:NM_153444:exon1:c.A825G:p.T275T	exonic	ENSG00000183303	NA	synonymous SNV	ENSG00000183303:ENST00000329434:exon1:c.A825G:p.T275T	Score=532;Name=lod=193	NA	11p15.4	NA	NA	NA	NA	rs72484720	0.27	0.27	0.25	0.236621	0.2763	0.128	0.2911	0.3472	0.1196	0.29	0.15	0.28	0.37	0.2575	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.231367	NA	NA	0.282502	0.32519	NA	0.261	NA	5.8503646
1067	2	220356520	220356520	G	T	exonic	SPEG	NA	synonymous SNV	SPEG:NM_005876:exon39:c.G9390T:p.P3130P	exonic	ENSG00000072195	NA	synonymous SNV	ENSG00000072195:ENST00000312358:exon39:c.G9390T:p.P3130P	Score=510;Name=lod=157	NA	2q35	NA	NA	NA	NA	rs12473286	0.24	0.24	0.238	0.280751	0.2744	0.1458	0.2723	0.267	0.4509	0.27	0.16	0.29	0.24	0.2798	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.991456	NA	NA	0.26224	0.24597	NA	0.152	NA	5.8502266
1067	1	32403089	32403089	A	G	intronic	PTP4A2	NA	NA	NA	intronic	ENSG00000184007	NA	NA	NA	NA	NA	1p35.1	NA	Name=TAF1,Pol2(b),Pol2,Pol2-4H8,HDAC2_(SC-6296),c-Myc,HEY1	Name=119	NA	rs636503	0.33	0.33	0.34	0.385583	0.1501	0.3958	0.3098	0.6263	0.3456	0.16	0.37	0.23	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.505332	2.505332	NA	NA	NA	NA	0.435	NA	5.8499
1067	1	183209086	183209086	C	A	intronic	LAMC2	NA	NA	NA	intronic	ENSG00000058085	NA	NA	NA	Score=300;Name=lod=22	NA	1q25.3	NA	NA	Name=8	NA	rs2477436	0.31	0.31	0.33	0.345647	0.1501	0.3403	0.3242	0.5129	0.3415	0.16	0.34	0.3	0.53	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.136225	NA	NA	NA	NA	ID=COSN163368;OCCURENCE=1(NS)	0.268	NA	5.8499
1067	13	90014216	90014216	T	A	intergenic	LINC00433,LINC00353	dist=816452;dist=186832	NA	NA	ncRNA_exonic	ENSG00000225530	NA	NA	NA	Score=783;Name=lod=2019	NA	13q31.3	NA	Name=CTCF	NA	NA	rs56223692	0.07	0.07	0.072	0.0535144	0.1501	0.002	0.0576	0.0045	0.0706	0.16	0.0035	0.08	NA	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.41903	NA	NA	NA	NA	NA	0.123	NA	5.8499
1067	6	29894392	29894392	G	T	upstream	HCG4B	NA	NA	NA	ncRNA_exonic	ENSG00000227262	NA	NA	NA	NA	NA	6p22.1	NA	Name=YY1,YY1_(C-20)	Name=3	NA	rs1627764	0.34	0.34	0.338	0.36242	0.3171	0.2758	0.2954	0.4493	0.4284	0.3	0.3	0.36	0.44	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.159814	NA	NA	NA	NA	NA	0.29	NA	5.8495666
1067	12	72666485	72666485	A	G	ncRNA_exonic	TRHDE-AS1	NA	NA	NA	ncRNA_UTR5	ENSG00000072657	NA	NA	NA	Score=588;Name=lod=326	NA	12q21.1	NA	Name=CTCF	NA	NA	rs74594364	NA	NA	NA	0.839657	0.8171	0.9177	0.8545	0.7958	0.8313	NA	NA	NA	NA	NA	0.076	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.378538	NA	NA	NA	NA	NA	0.058	NA	5.8495666
1067	12	72666488	72666488	G	A	ncRNA_exonic	TRHDE-AS1	NA	NA	NA	ncRNA_UTR5	ENSG00000072657	NA	NA	NA	Score=588;Name=lod=326	NA	12q21.1	NA	Name=CTCF	NA	NA	rs78720771	NA	NA	NA	0.839657	0.8171	0.9177	0.8545	0.7958	0.8313	NA	NA	NA	NA	NA	0.076	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.179735	NA	NA	NA	NA	NA	0.058	NA	5.8495666
1067	1	157485504	157485504	G	A	exonic	FCRL5	NA	nonsynonymous SNV	FCRL5:NM_001195388:exon17:c.C2885T:p.P962L	exonic	ENSG00000143297	NA	synonymous SNV	ENSG00000143297:ENST00000356953:exon17:c.C2895T:p.S965S,ENSG00000143297:ENST00000361835:exon17:c.C2895T:p.S965S	NA	NA	1q23.1	NA	NA	NA	NA	rs115493285	0.03	0.03	0.026	0.0223642	0.0676	0.001	0.036	0.0038	0.0133	0.06	NA	0.05	0.0041	0.0328	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.134397	NA	NA	0.050116	0.010213	ID=COSM424176;OCCURENCE=1(breast)	0.029	NA	5.849484
1067	10	27444578	27444578	C	T	intronic	MASTL	NA	NA	NA	intronic	ENSG00000120539	NA	NA	NA	NA	NA	10p12.1	NA	Name=E2F4	Name=145	NA	rs41282218	0.04	0.04	0.032	0.04373	0.0537	0.004	0.0317	0.0802	0.0337	0.05	0.0035	0.04	0.06	0.0471	0.081	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.408829	1.408829	NA	0.049767	0.080799	NA	0.051	NA	5.849433
1067	5	157158701	157158701	C	G	intronic	THG1L	NA	NA	NA	intronic	ENSG00000113272	NA	NA	NA	NA	NA	5q33.3	NA	Name=IRF1,GTF2F1_(RAP-74),CHD2_(N-1250),BAF155,ELF1_(SC-631),HEY1,NFKB,NF-YB,Pol2(phosphoS2),NANOG_(SC-33759),Pol2,RFX5_(N-494),Mxi1_(bHLH),NRSF,SP1,KAP1,ZNF263,E2F6,Pol2-4H8,GATA-2,HA-E2F1,NF-YA,Pol2(b),TAF1,E2F6_(H-50),GABP,ELK4	Name=148	NA	rs2270816	0.15	0.15	0.152	0.158746	0.1511	0.0823	0.1729	0.208	0.1687	0.16	0.09	0.14	0.19	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.488106	NA	NA	NA	NA	NA	0.094	NA	5.8489
1067	6	31116210	31116210	G	A	exonic	CCHCR1	NA	synonymous SNV	CCHCR1:NM_001105563:exon10:c.C1444T:p.L482L,CCHCR1:NM_001105564:exon10:c.C1552T:p.L518L,CCHCR1:NM_019052:exon10:c.C1285T:p.L429L	exonic	ENSG00000204536	NA	synonymous SNV	ENSG00000204536:ENST00000376266:exon10:c.C1285T:p.L429L,ENSG00000204536:ENST00000396263:exon10:c.C1285T:p.L429L,ENSG00000204536:ENST00000396268:exon10:c.C1552T:p.L518L,ENSG00000204536:ENST00000451521:exon10:c.C1444T:p.L482L	Score=363;Name=lod=40	NA	6p21.33	NA	NA	NA	NA	rs130071	0.21	0.21	0.216	0.195487	0.2793	0.0575	0.2608	0.1815	0.2239	0.29	0.06	0.28	0.2	0.2488	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.229459	NA	NA	0.290251	0.215186	NA	0.225	NA	5.8483156
1067	9	8858043	8858043	C	T	intronic	PTPRD	NA	NA	NA	intronic	ENSG00000153707	NA	NA	NA	NA	NA	9p24.1	NA	Name=TAF1,ZNF263	Name=46	NA	rs118166957	0.18	0.18	0.138	0.170527	0.1521	0.255	0.2248	0.1392	0.1063	0.15	0.27	0.22	0.1	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.652401	NA	NA	NA	NA	NA	0.029	NA	5.8479
1067	8	124664874	124664874	T	C	exonic	KLHL38	NA	nonsynonymous SNV	KLHL38:NM_001081675:exon1:c.A293G:p.H98R	exonic	ENSG00000175946	NA	nonsynonymous SNV	ENSG00000175946:ENST00000325995:exon1:c.A293G:p.H98R	NA	NA	8q24.13	NA	NA	NA	NA	rs7386562	0.64	0.64	0.736	0.727037	0.8579	0.7113	0.7118	0.6672	0.7004	0.72	0.61	0.67	0.51	0.79	0.84	0.71	T	0.0	B	0.0	B	0.207	N	1.000	P	0.43	N	-0.19	T	-0.982	T	0.000	T	0.015	-1.282	0.042	-10.7	-2.417	-0.180	0.683	-1.282167	NA	0.56	0.837783	0.71582	NA	NA	NA	5.8476504
1067	15	78200594	78200594	G	A	intergenic	LOC253044,LOC645752	dist=259013;dist=5965	NA	NA	intergenic	ENSG00000260139,ENSG00000260776	dist=3578;dist=5965	NA	NA	Score=574;Name=lod=287	NA	15q24.3	NA	Name=CTCF,ZNF263,PAX5-C20	Name=103	NA	rs4325522	0.32	0.32	0.31	0.276957	0.4861	0.1597	0.2795	0.2216	0.2556	0.48	0.18	0.32	0.24	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.559951	NA	NA	NA	NA	NA	0.413	NA	5.8472334
1067	16	66597143	66597143	G	T	intronic	CKLF,CKLF-CMTM1	NA	NA	NA	intronic	ENSG00000217555,ENSG00000254788	NA	NA	NA	NA	NA	16q21	NA	Name=GATA-1	Name=3	NA	rs2232726	0.09	0.09	0.073	0.0994409	0.0497	0.1101	0.1427	0.0991	0.1094	0.05	0.11	0.13	0.08	0.0745	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.807696	NA	NA	0.028605	0.099046	NA	0.051	NA	5.847195
1067	7	19748700	19748700	G	A	upstream	TWISTNB	NA	NA	NA	UTR5	ENSG00000105849	ENST00000222567:c.-61C>T	NA	NA	NA	NA	7p21.1	NA	Name=TBP,IRF1,PAX5-C20,PAX5-N19,SRF,GRp20,CTCF_(C-20),SIX5,CCNT2,c-Myc,HEY1,NFKB,HA-E2F1,Sin3Ak-20,KAP1,Pol2-4H8,CTCF_(SC-5916),RFX5_(N-494),Ini1,YY1,FOXA1_(C-20),Pol2(b),CEBPB,GTF2F1_(RAP-74),CHD2_(N-1250),CTCF,p300,Oct-2,Max,STAT1,Rad21,ELF1_(SC-631),YY1_(C-20),BRCA1_(C-1863),TAF7_(SQ-8),E2F6,eGFP-JunD,IRF4_(M-17),USF1_(SC-8983),Pol2,ATF3,Mxi1_(bHLH),NRSF,SP1,Pol2(phosphoS2),TCF4,SMC3_(ab9263),E2F4,WHIP,POU2F2,USF2,HMGN3,TAF1,ETS1,E2F6_(H-50),Znf143_(16618-1-AP)	Name=148	NA	rs2072185	0.26	0.26	0.241	0.264177	0.1531	0.5804	0.183	0.1725	0.2342	0.15	0.55	0.18	0.17	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.324168	NA	NA	NA	NA	NA	0.217	NA	5.8469
1067	20	44750850	44750850	C	G	intronic	CD40	NA	NA	NA	intronic	ENSG00000101017	NA	NA	NA	NA	NA	20q13.12	NA	Name=c-Jun,c-Fos,STAT3,FOSL2,p300	Name=88	NA	rs11569317	0.04	0.04	0.037	0.0405351	0.0507	0.0079	0.0245	0.0749	0.0286	0.05	0.01	0.01	0.08	0.0494	0.081	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.693716	1.693716	NA	0.05314	0.081253	NA	0.036	NA	5.84676
1067	2	113887207	113887207	T	C	exonic	IL1RN	NA	synonymous SNV	IL1RN:NM_173842:exon2:c.T171C:p.A57A,IL1RN:NM_000577:exon3:c.T117C:p.A39A,IL1RN:NM_173841:exon4:c.T180C:p.A60A,IL1RN:NM_173843:exon4:c.T69C:p.A23A	exonic	ENSG00000136689	NA	synonymous SNV	ENSG00000136689:ENST00000409930:exon2:c.T171C:p.A57A,ENSG00000136689:ENST00000354115:exon3:c.T117C:p.A39A,ENSG00000136689:ENST00000259206:exon4:c.T180C:p.A60A,ENSG00000136689:ENST00000361779:exon4:c.T69C:p.A23A,ENSG00000136689:ENST00000409052:exon6:c.T69C:p.A23A	Score=366;Name=lod=41	NA	2q13	NA	NA	NA	NA	rs419598	0.18	0.18	0.154	0.191693	0.2922	0.0942	0.3314	0.0333	0.3037	0.29	0.08	0.33	0.04	0.2491	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.663398	NA	NA	0.278837	0.064231	NA	0.246	NA	5.8465296
1067	15	78200581	78200581	G	A	intergenic	LOC253044,LOC645752	dist=259000;dist=5978	NA	NA	intergenic	ENSG00000260139,ENSG00000260776	dist=3565;dist=5978	NA	NA	Score=574;Name=lod=287	NA	15q24.3	NA	Name=CTCF,ZNF263	Name=103	NA	rs4325521	0.32	0.32	0.318	0.277356	0.4871	0.1597	0.2795	0.2216	0.2566	0.48	0.18	0.33	0.24	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.056681	NA	NA	NA	NA	NA	0.413	NA	5.8462334
1067	22	24921558	24921558	C	T	intronic	UPB1	NA	NA	NA	intronic	ENSG00000100024	NA	NA	NA	NA	NA	22q11.23	NA	Name=HNF4A_(H-171),FOXA1_(C-20),JunD,eGFP-JunB,FOSL2,c-Fos,ZNF263,HDAC2_(SC-6296),c-Jun,RFX5_(N-494),CTCF_(SC-5916),eGFP-FOS,CTCF_(C-20),NFKB,ERRA,GABP,POU2F2,Znf143_(16618-1-AP),IRF4_(M-17),eGFP-JunD,YY1_(C-20),HNF4A,SMC3_(ab9263),SP1,ATF3,Oct-2,HNF4G_(SC-6558),ELF1_(SC-631),Rad21,FOXA1_(SC-101058),FOSL1_(SC-183),BATF,GTF2F1_(RAP-74),RXRA,p300,CTCF	Name=142	NA	rs5996713	0.12	0.12	0.102	0.159744	0.1541	0.0665	0.2003	0.1293	0.274	0.14	0.07	0.18	0.11	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.354853	NA	NA	NA	NA	NA	0.138	NA	5.8459
1067	6	90390443	90390443	C	A	exonic	MDN1	NA	nonsynonymous SNV	MDN1:NM_014611:exon74:c.G12130T:p.A4044S	exonic	ENSG00000112159	NA	nonsynonymous SNV	ENSG00000112159:ENST00000369393:exon74:c.G12130T:p.A4044S,ENSG00000112159:ENST00000428876:exon74:c.G12130T:p.A4044S	NA	NA	6q15	NA	NA	NA	NA	rs9353689	0.66	0.66	0.652	0.611821	0.4712	0.9077	0.7046	0.612	0.3855	0.49	0.92	0.68	0.63	0.5365	0.92	0.81	T	0.145	B	0.048	B	0.598	N	1.000	P	1.355	L	4.07	T	-0.917	T	0.003	T	0.06	0.652	7.498	-0.328	-0.083	-0.218	8.681	0.652024	NA	0.68	0.479767	0.613255	NA	0.514	NA	5.8458664
1067	15	90903311	90903311	A	G	exonic	ZNF774	NA	nonsynonymous SNV	ZNF774:NM_001004309:exon4:c.A248G:p.N83S	exonic	ENSG00000196391	NA	nonsynonymous SNV	ENSG00000196391:ENST00000354377:exon4:c.A248G:p.N83S	NA	NA	15q26.1	NA	NA	NA	NA	rs2589957	0.67	0.67	0.668	0.6875	0.4513	0.8393	0.6873	0.8177	0.5982	0.46	0.86	0.62	0.8	0.5618	0.86	0.62	T	0.0	B	0.0	B	0.552	N	1.000	P	-0.55	N	1.78	T	-1.030	T	0.000	T	0.001	-0.16	3.219	1.71	0.024	0.019	1.598	-0.159861	NA	1	0.474523	0.745794	NA	0.63	NA	5.8457104
1067	8	92364100	92364100	T	C	exonic	SLC26A7	NA	synonymous SNV	SLC26A7:NM_052832:exon10:c.T1203C:p.L401L,SLC26A7:NM_134266:exon10:c.T1203C:p.L401L	exonic	ENSG00000147606	NA	synonymous SNV	ENSG00000147606:ENST00000276609:exon10:c.T1203C:p.L401L,ENSG00000147606:ENST00000309536:exon10:c.T1203C:p.L401L,ENSG00000147606:ENST00000523719:exon11:c.T1203C:p.L401L	Score=536;Name=lod=201	NA	8q21.3	NA	NA	NA	NA	rs10109254	0.22	0.22	0.21	0.221046	0.2823	0.0357	0.2233	0.32	0.2137	0.28	0.03	0.25	0.32	0.2437	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.766414	NA	NA	0.295465	0.311394	NA	0.326	NA	5.8452016
1068	19	49385231	49385231	G	A	intronic	TULP2	NA	NA	NA	intronic	ENSG00000104804	NA	NA	NA	NA	NA	19q13.33	NA	Name=Pol2(b),Pol2-4H8,ERalpha_a,SIX5,c-Myc,Znf143_(16618-1-AP),ETS1,BAF170	Name=74	NA	rs1005061	0.04	0.04	0.035	0.0491214	0.0795	0.002	0.0663	0.0121	0.1043	0.09	0.0017	0.07	0.01	0.0756	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.828222	NA	NA	NA	NA	NA	0.022	NA	5.8449
1068	2	33488419	33488419	G	A	exonic	LTBP1	NA	synonymous SNV	LTBP1:NM_000627:exon11:c.G1599A:p.T533T,LTBP1:NM_001166264:exon11:c.G1599A:p.T533T,LTBP1:NM_001166265:exon11:c.G1440A:p.T480T,LTBP1:NM_001166266:exon11:c.G1440A:p.T480T,LTBP1:NM_206943:exon15:c.G2577A:p.T859T	exonic	ENSG00000049323	NA	synonymous SNV	ENSG00000049323:ENST00000468091:exon5:c.G531A:p.T177T,ENSG00000049323:ENST00000413303:exon6:c.G561A:p.T187T,ENSG00000049323:ENST00000390003:exon11:c.G1602A:p.T534T,ENSG00000049323:ENST00000402934:exon11:c.G1440A:p.T480T,ENSG00000049323:ENST00000404525:exon11:c.G1440A:p.T480T,ENSG00000049323:ENST00000407925:exon11:c.G1599A:p.T533T,ENSG00000049323:ENST00000418533:exon11:c.G1599A:p.T533T,ENSG00000049323:ENST00000354476:exon15:c.G2580A:p.T860T,ENSG00000049323:ENST00000404816:exon15:c.G2577A:p.T859T	Score=561;Name=lod=254	NA	2p22.3	NA	NA	NA	NA	rs12468099	0.19	0.19	0.189	0.167532	0.2863	0.2371	0.1844	0.0166	0.1656	0.3	0.21	0.18	0.02	0.2462	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.620098	NA	NA	0.289419	0.062869	NA	0.174	NA	5.8447476
1068	1	160394937	160394937	A	C	exonic	VANGL2	NA	synonymous SNV	VANGL2:NM_020335:exon8:c.A1335C:p.G445G	exonic	ENSG00000162738	NA	synonymous SNV	ENSG00000162738:ENST00000368061:exon8:c.A1335C:p.G445G	Score=669;Name=lod=696	NA	1q23.2	NA	NA	NA	NA	rs17380127	0.2	0.2	0.187	0.207468	0.2783	0.0843	0.2075	0.1702	0.3119	0.26	0.12	0.22	0.16	0.2513	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.49269	1.49269	NA	0.292558	0.170222	NA	0.232	NA	5.8445086
1068	5	118788196	118788196	C	G	UTR5	HSD17B4	NM_001199292:c.-75C>G,NM_000414:c.-75C>G	NA	NA	UTR5	ENSG00000133835	ENST00000256216:c.-75C>G,ENST00000442060:c.-75C>G,ENST00000515320:c.-75C>G	NA	NA	NA	NA	5q23.1	NA	Name=IRF1,c-Myc,ELF1_(SC-631),HEY1,SRF,SIX5,Pol2,Egr-1,HA-E2F1,YY1_(C-20),Pol2-4H8,E2F1,TAF1,Znf143_(16618-1-AP),E2F4,HMGN3	Name=148	NA	rs26180	0.44	0.44	0.445	0.40635	0.4891	0.5119	0.5216	0.2201	0.3824	0.51	0.48	0.52	0.24	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.61375	1.61375	NA	NA	NA	NA	0.319	NA	5.8442334
1068	18	47376103	47376103	C	G	intronic	MYO5B	NA	NA	NA	ncRNA_exonic	ENSG00000267322	NA	NA	NA	NA	NA	18q21.1	NA	Name=TBP,eGFP-FOS,ZNF263,c-Fos,c-Jun,Pol2(b),JunD,FOSL2,GTF2F1_(RAP-74),Max,eGFP-JunD,TCF4,Pol2,TAF1	Name=125	NA	rs490648	0.36	0.36	0.371	0.353235	0.4891	0.123	0.3429	0.4493	0.3282	0.47	0.13	0.39	0.43	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.094082	NA	NA	NA	NA	NA	0.384	NA	5.8442333
1068	20	32990050	32990050	G	T	intronic	ITCH	NA	NA	NA	ncRNA_exonic	ENSG00000234933	NA	NA	NA	Score=726;Name=lod=1193	NA	20q11.22	NA	Name=HDAC2_(SC-6296),FOXA1_(C-20),p300,FOXA1_(SC-101058),SP1	NA	NA	rs4142007	0.54	0.54	0.516	0.566094	0.4891	0.5952	0.6816	0.5356	0.5746	0.46	0.59	0.62	0.55	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.357342	NA	NA	NA	NA	NA	0.507	NA	5.8442333
1068	16	56667282	56667282	C	A	exonic	MT1M	NA	nonsynonymous SNV	MT1M:NM_176870:exon2:c.C59A:p.T20K	exonic	ENSG00000205364	NA	nonsynonymous SNV	ENSG00000205364:ENST00000379818:exon2:c.C59A:p.T20K,ENSG00000205364:ENST00000570233:exon2:c.C59A:p.T20K	Score=295;Name=lod=21	NA	16q12.2	NA	NA	NA	NA	rs1827210	0.73	0.73	0.681	0.710663	0.832	0.6657	0.7867	0.5492	0.7965	0.84	0.7	0.8	0.54	0.8069	0.85	1	T	0.0	B	0.002	B	0.018	N	1.000	P	.	.	3.23	T	-0.998	T	0.000	T	0.139	-2.343	0.004	-0.081	-0.602	0.288	4.092	-2.343099	NA	1	0.850814	0.601911	NA	0.768	NA	5.8436194
1068	14	38016044	38016044	C	G	intronic	MIPOL1	NA	NA	NA	intronic	ENSG00000151338	NA	NA	NA	Score=425;Name=lod=71	NA	14q21.1	NA	Name=HEY1,TBP,FOXA2_(SC-6554),p300,Pol2	Name=8	NA	rs10151200	0.68	0.68	0.656	0.632188	0.5795	0.8403	0.6671	0.5469	0.5624	0.59	0.87	0.67	0.59	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.594936	NA	NA	0.578567	0.583815	NA	0.674	NA	5.841933
1068	11	51426470	51426470	C	T	intergenic	OR4A5,OR4C46	dist=14022;dist=88812	NA	NA	ncRNA_exonic	ENSG00000255349	NA	NA	NA	Score=482;Name=lod=121	NA	11p11.12	Score=808;Name=V$CDP_01	NA	NA	NA	rs72486118	0.13	0.13	0.104	0.123802	0.1581	0.1438	0.1254	0.059	0.1544	0.16	0.15	0.11	0.08	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.978781	NA	NA	NA	NA	NA	0.181	NA	5.8419
1068	20	60736449	60736449	G	A	intronic	SS18L1	NA	NA	NA	intronic	ENSG00000184402	NA	NA	NA	NA	NA	20q13.33	NA	Name=Egr-1	Name=69	NA	rs60991008	0.05	0.05	0.047	0.0746805	0.0537	0.003	0.049	0.1672	0.0634	0.04	NA	0.02	0.15	0.0524	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.385271	NA	NA	0.052258	0.152273	NA	0.109	NA	5.841642
1068	16	88061150	88061150	C	T	exonic	BANP	NA	synonymous SNV	BANP:NM_001173540:exon7:c.C858T:p.I286I,BANP:NM_001173541:exon7:c.C840T:p.I280I,BANP:NM_017869:exon7:c.C840T:p.I280I,BANP:NM_079837:exon7:c.C840T:p.I280I,BANP:NM_001173539:exon8:c.C957T:p.I319I,BANP:NM_001173542:exon8:c.C957T:p.I319I,BANP:NM_001173543:exon8:c.C933T:p.I311I	exonic	ENSG00000172530	NA	synonymous SNV	ENSG00000172530:ENST00000355022:exon7:c.C840T:p.I280I,ENSG00000172530:ENST00000355163:exon7:c.C858T:p.I286I,ENSG00000172530:ENST00000393208:exon7:c.C840T:p.I280I,ENSG00000172530:ENST00000479780:exon7:c.C840T:p.I280I,ENSG00000172530:ENST00000286122:exon8:c.C933T:p.I311I,ENSG00000172530:ENST00000393207:exon8:c.C933T:p.I311I,ENSG00000172530:ENST00000538234:exon8:c.C957T:p.I319I	NA	NA	16q24.2	Score=789;Name=V$COMP1_01	NA	NA	NA	rs74740586	0.4	0.4	0.328	0.3748	0.2674	0.5476	0.4496	0.3601	0.274	0.27	0.6	0.43	0.37	0.3138	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.095387	NA	NA	0.243837	0.338035	NA	0.384	NA	5.8416296
1068	7	133749164	133749164	G	A	exonic	EXOC4	NA	synonymous SNV	EXOC4:NM_021807:exon18:c.G2808A:p.Q936Q	exonic	ENSG00000131558	NA	synonymous SNV	ENSG00000131558:ENST00000541309:exon6:c.G672A:p.Q224Q,ENSG00000131558:ENST00000545148:exon10:c.G1638A:p.Q546Q,ENSG00000131558:ENST00000253861:exon18:c.G2808A:p.Q936Q,ENSG00000131558:ENST00000539845:exon18:c.G2505A:p.Q835Q	Score=507;Name=lod=153	NA	7q33	Score=718;Name=V$NRSF_01	NA	NA	NA	rs6953296	0.68	0.68	0.649	0.669129	0.6014	0.7609	0.7622	0.7065	0.5276	0.6	0.76	0.73	0.67	0.6274	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.031576	NA	NA	0.596279	0.693373	NA	0.565	NA	5.8415876
1068	9	117103973	117103973	A	G	exonic	AKNA	NA	nonsynonymous SNV	AKNA:NM_030767:exon21:c.T3907C:p.S1303P	exonic	ENSG00000106948	NA	nonsynonymous SNV	ENSG00000106948:ENST00000374079:exon7:c.T742C:p.S248P,ENSG00000106948:ENST00000374075:exon19:c.T3664C:p.S1222P,ENSG00000106948:ENST00000223791:exon20:c.T2287C:p.S763P,ENSG00000106948:ENST00000307564:exon21:c.T3907C:p.S1303P,ENSG00000106948:ENST00000374088:exon21:c.T3907C:p.S1303P	NA	NA	9q32	NA	NA	NA	NA	rs2250242	0.61	0.61	0.605	0.610224	0.4841	0.6131	0.536	0.8828	0.4213	0.48	0.62	0.52	0.88	0.532	0.88	0.38	T	0.0	B	0.0	B	0.006	N	1.000	P	-0.805	N	2.52	T	-1.067	T	0.000	T	0.058	-0.736	0.858	0.646	0.042	-0.029	4.350	-0.736344	NA	0.39	0.476047	0.820699	NA	0.659	NA	5.8411864
1068	2	152387553	152387553	T	C	exonic	NEB	NA	synonymous SNV	NEB:NM_004543:exon117:c.A16446G:p.T5482T,NEB:NM_001164507:exon145:c.A21585G:p.T7195T,NEB:NM_001164508:exon145:c.A21585G:p.T7195T,NEB:NM_001271208:exon146:c.A21690G:p.T7230T	exonic	ENSG00000183091	NA	synonymous SNV	ENSG00000183091:ENST00000413693:exon45:c.A5775G:p.T1925T,ENSG00000183091:ENST00000172853:exon117:c.A16482G:p.T5494T,ENSG00000183091:ENST00000409198:exon118:c.A16482G:p.T5494T,ENSG00000183091:ENST00000603639:exon143:c.A21585G:p.T7195T,ENSG00000183091:ENST00000604864:exon143:c.A21585G:p.T7195T,ENSG00000183091:ENST00000397345:exon145:c.A21585G:p.T7195T,ENSG00000183091:ENST00000427231:exon145:c.A21585G:p.T7195T	NA	NA	2q23.3	Score=682;Name=V$P53_01	NA	NA	NA	rs4664475	0.56	0.56	0.517	0.491613	0.6213	0.5585	0.6556	0.3525	0.3609	0.61	0.61	0.66	0.37	0.583	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.994835	NA	NA	0.621977	0.413248	NA	0.543	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000081120.3;CLNDSDB=.;CLNDSDBID=.	5.8403896
1068	15	78200674	78200674	C	T	intergenic	LOC253044,LOC645752	dist=259093;dist=5885	NA	NA	intergenic	ENSG00000260139,ENSG00000260776	dist=3658;dist=5885	NA	NA	Score=574;Name=lod=287	NA	15q24.3	NA	Name=CTCFL_(SC-98982),SMC3_(ab9263),CTCF,CTCF_(SC-5916),ZNF263,c-Myc,CTCF_(C-20),PAX5-C20	Name=103	NA	rs4402533	0.32	0.32	0.29	0.279153	0.494	0.1657	0.2824	0.2171	0.2566	0.48	0.19	0.32	0.23	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.764388	NA	NA	NA	NA	NA	0.384	NA	5.8393334
1068	4	81000953	81000953	A	G	intergenic	ANTXR2,PRDM8	dist=6476;dist=105471	NA	NA	ncRNA_exonic	ENSG00000236530	NA	NA	NA	Score=333;Name=lod=30	NA	4q21.21	NA	NA	Name=7	NA	rs41407844	0.46	0.46	0.467	0.511382	0.161	0.6379	0.3415	0.8033	0.4673	0.15	0.65	0.32	0.83	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.243195	NA	NA	NA	NA	NA	0.543	NA	5.839
1068	11	5141902	5141902	T	C	intergenic	OR52E2,OR52A5	dist=61045;dist=11020	NA	NA	ncRNA_exonic	ENSG00000205494	NA	NA	NA	Score=295;Name=lod=21	NA	11p15.4	NA	NA	NA	NA	rs10837374	0.73	0.73	0.756	0.750799	0.7276	0.5675	0.7334	0.9175	0.7505	0.72	0.58	0.73	0.93	0.7237	0.93	0	D	0.0	B	0.0	B	.	.	.	.	.	.	.	.	-1.028	T	0.000	T	.	1.437	10.75	-1.51	-0.351	-1.714	6.585	1.437222	1.437222	1	0.71033	0.890504	NA	0.797	NA	5.83837
1068	8	125463098	125463098	A	T	UTR5	TRMT12	NM_017956:c.-71A>T	NA	NA	UTR5	ENSG00000183665	ENST00000328599:c.-71A>T	NA	NA	NA	NA	8q24.13	NA	Name=TBP,Nrf1,SIX5,c-Myc,NFKB,HEY1,Pol2-4H8,YY1,ELK4,p300,Oct-2,Max,ELF1_(SC-631),TAF7_(SQ-8),BRCA1_(C-1863),YY1_(C-20),TR4,SP1,PU.1,Pol2,Pol2(phosphoS2),POU2F2,GABP,TAF1	Name=146	NA	rs3812474	0.55	0.55	0.544	0.570687	0.495	0.4415	0.4798	0.7806	0.5624	0.5	0.42	0.52	0.8	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.15763	NA	NA	NA	NA	NA	0.493	NA	5.8383334
1068	19	5210782	5210782	G	A	exonic	PTPRS	NA	synonymous SNV	PTPRS:NM_130853:exon25:c.C3928T:p.L1310L,PTPRS:NM_130855:exon26:c.C3940T:p.L1314L,PTPRS:NM_130854:exon29:c.C5155T:p.L1719L,PTPRS:NM_002850:exon34:c.C5269T:p.L1757L	exonic	ENSG00000105426	NA	synonymous SNV	ENSG00000105426:ENST00000592099:exon24:c.C3928T:p.L1310L,ENSG00000105426:ENST00000353284:exon25:c.C3928T:p.L1310L,ENSG00000105426:ENST00000588012:exon28:c.C5155T:p.L1719L,ENSG00000105426:ENST00000348075:exon29:c.C5155T:p.L1719L,ENSG00000105426:ENST00000262963:exon30:c.C5209T:p.L1737L,ENSG00000105426:ENST00000587303:exon33:c.C5269T:p.L1757L,ENSG00000105426:ENST00000357368:exon34:c.C5269T:p.L1757L,ENSG00000105426:ENST00000372412:exon34:c.C5272T:p.L1758L	Score=467;Name=lod=105	NA	19p13.3	NA	NA	NA	NA	rs1143698	0.32	0.32	0.311	0.335064	0.2714	0.0992	0.3516	0.5545	0.3354	0.28	0.12	0.33	0.59	0.2842	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.082599	NA	NA	0.273023	0.466636	ID=COSM148463;OCCURENCE=1(stomach)	0.217	NA	5.8380436
1068	6	85997097	85997097	T	C	intergenic	TBX18,NT5E	dist=523143;dist=162205	NA	NA	ncRNA_exonic	ENSG00000217060	NA	NA	NA	Score=684;Name=lod=800	NA	6q14.3	NA	Name=FOXA1_(SC-101058),RXRA	NA	NA	rs12199725	0.1	0.1	0.081	0.117212	0.162	0.0655	0.0548	0.0356	0.2791	0.17	0.06	0.07	0.03	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.188191	NA	NA	NA	NA	NA	0.065	NA	5.838
1068	1	160395003	160395003	G	A	exonic	VANGL2	NA	synonymous SNV	VANGL2:NM_020335:exon8:c.G1401A:p.P467P	exonic	ENSG00000162738	NA	synonymous SNV	ENSG00000162738:ENST00000368061:exon8:c.G1401A:p.P467P	Score=669;Name=lod=696	NA	1q23.2	NA	NA	NA	NA	rs17380141	0.21	0.21	0.206	0.227037	0.2793	0.0843	0.219	0.2375	0.3119	0.26	0.12	0.23	0.21	0.2574	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.201972	NA	NA	0.292442	0.237404	ID=COSM146666;OCCURENCE=1(stomach)	0.268	NA	5.8375246
1068	21	38445069	38445069	T	C	UTR5	PIGP	NM_153681:c.-182A>G	NA	NA	UTR5	ENSG00000185808	ENST00000464265:c.-182A>G,ENST00000430792:c.-621A>G	NA	NA	NA	NA	21q22.13	NA	Name=HA-E2F1,Pol2-4H8,E2F1,Ini1,Egr-1,ZBTB7A_(SC-34508),c-Myc,CCNT2,AP-2gamma,HEY1,HMGN3,TAF1,E2F6_(H-50),YY1_(C-20),E2F6,Pol2	Name=136	NA	rs2298683	0.4	0.4	0.423	0.389177	0.496	0.381	0.3573	0.3351	0.3834	0.5	0.35	0.37	0.34	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.472846	1.472846	NA	NA	NA	NA	0.29	NA	5.8373334
1068	19	885818	885818	A	G	exonic	MED16	NA	synonymous SNV	MED16:NM_005481:exon5:c.T831C:p.F277F	exonic	ENSG00000175221	NA	synonymous SNV	ENSG00000175221:ENST00000589119:exon4:c.T831C:p.F277F,ENSG00000175221:ENST00000592943:exon4:c.T831C:p.F277F,ENSG00000175221:ENST00000269814:exon5:c.T831C:p.F277F,ENSG00000175221:ENST00000312090:exon5:c.T831C:p.F277F,ENSG00000175221:ENST00000325464:exon5:c.T831C:p.F277F,ENSG00000175221:ENST00000395808:exon5:c.T831C:p.F277F,ENSG00000175221:ENST00000606248:exon5:c.T831C:p.F277F	Score=558;Name=lod=248	NA	19p13.3	Score=825;Name=V$E2F_01	NA	NA	NA	rs1060442	0.62	0.62	0.67	0.621206	0.6133	0.6667	0.5259	0.6596	0.5982	0.61	0.66	0.52	0.67	0.6015	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.305499	1.305499	NA	0.614651	0.625284	NA	0.667	NA	5.8372156
1068	12	2907087	2907087	G	A	intronic	FKBP4	NA	NA	NA	ncRNA_intronic	ENSG00000258092,ENSG00000258325	NA	NA	NA	Score=358;Name=lod=38	NA	12p13.33	NA	NA	Name=26	NA	rs41456246	0.09	0.09	0.077	0.0664936	0.1829	0.0337	0.0605	0.0113	0.0593	0.18	0.03	0.07	0.01	0.1366	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.557832	1.557832	NA	0.176628	0.034725	NA	0.051	NA	5.8372053
1068	15	80260014	80260014	T	C	exonic	BCL2A1	NA	synonymous SNV	BCL2A1:NM_001114735:exon2:c.A441G:p.T147T	exonic	ENSG00000140379	NA	synonymous SNV	ENSG00000140379:ENST00000335661:exon2:c.A441G:p.T147T	NA	NA	15q25.1	NA	NA	Name=22	NA	rs8026803	0.37	0.37	0.354	0.389377	0.2584	0.5288	0.2925	0.3956	0.4407	0.25	0.53	0.35	0.38	0.3141	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.367349	NA	NA	0.256979	0.365753	NA	0.37	NA	5.8371876
1068	17	45364619	45364619	A	G	intronic	ITGB3	NA	NA	NA	intronic	ENSG00000259207,ENSG00000259753	NA	NA	NA	NA	NA	17q21.32	NA	Name=IRF4_(M-17),YY1_(C-20),Rad21,EBF1_(C-8),CTCF,CTCF_(C-20)	Name=6	NA	rs13306478	0.04	0.04	0.028	0.0493211	0.0507	0.0446	0.0677	0.0408	0.0511	0.04	0.04	0.08	0.02	0.0537	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.29164	NA	NA	0.058488	0.041534	NA	0.007	NA	5.837112
1068	1	58971831	58971831	G	A	exonic	OMA1	NA	synonymous SNV	OMA1:NM_145243:exon8:c.C1266T:p.F422F	exonic	ENSG00000162600	NA	synonymous SNV	ENSG00000162600:ENST00000358603:exon8:c.C1266T:p.F422F,ENSG00000162600:ENST00000371226:exon8:c.C1266T:p.F422F	NA	NA	1p32.2	NA	NA	NA	NA	rs3087585	0.26	0.26	0.298	0.254593	0.2922	0.0526	0.2075	0.4546	0.1871	0.29	0.06	0.23	0.46	0.2508	0.46	.	.	.	.	.	.	.	.	0.882	P	.	.	.	.	-0.921	T	0.000	T	.	-0.332	2.427	-0.049	-0.102	-0.221	1.675	-0.331726	NA	NA	0.287093	0.403995	NA	0.312	NA	5.8365736
1068	17	80708601	80708601	C	G	exonic	FN3K	NA	synonymous SNV	FN3K:NM_022158:exon6:c.C900G:p.S300S	exonic	ENSG00000167363	NA	synonymous SNV	ENSG00000167363:ENST00000300784:exon6:c.C900G:p.S300S	NA	NA	17q25.3	NA	Name=SETDB1	Name=13	NA	rs1056534	0.64	0.64	0.635	0.655152	0.6014	0.6518	0.6686	0.68	0.6708	0.59	0.64	0.62	0.71	0.6226	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.788904	NA	NA	0.606279	0.642533	NA	0.565	NA	5.8363876
1068	4	26875266	26875266	A	G	intronic	STIM2	NA	NA	NA	ncRNA_intronic	ENSG00000248340	NA	NA	NA	NA	NA	4p15.2	NA	Name=PU.1	Name=11	NA	rs6448485	0.63	0.63	0.64	0.65655	0.498	0.6925	0.5735	0.8654	0.5593	0.49	0.68	0.57	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.169753	NA	NA	NA	NA	NA	0.667	NA	5.8353333
1069	5	98199204	98199204	C	T	exonic	CHD1	NA	synonymous SNV	CHD1:NM_001270:exon31:c.G4335A:p.E1445E	exonic	ENSG00000153922	NA	synonymous SNV	ENSG00000153922:ENST00000505657:exon2:c.G222A:p.E74E,ENSG00000153922:ENST00000284049:exon31:c.G4335A:p.E1445E	Score=678;Name=lod=756	NA	5q15	NA	NA	NA	NA	rs161941	0.3	0.3	0.327	0.296326	0.2903	0.0427	0.2363	0.6082	0.1851	0.28	0.05	0.27	0.62	0.2545	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.808593	NA	NA	0.28716	0.537466	NA	0.355	NA	5.8347066
1069	20	10277452	10277452	A	C	intronic	SNAP25	NA	NA	NA	ncRNA_intronic	ENSG00000227906	NA	NA	NA	Score=505;Name=lod=151	NA	20p12.2	Score=822;Name=V$CEBP_C	NA	NA	NA	rs362987	0.47	0.47	0.469	0.446086	0.499	0.2669	0.4914	0.5613	0.3885	0.51	0.3	0.49	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.362217	3.362217	NA	NA	NA	NA	0.543	NA	5.8343333
1069	15	78466127	78466127	T	C	exonic	ACSBG1	NA	nonsynonymous SNV	ACSBG1:NM_001199377:exon13:c.A1885G:p.M629V,ACSBG1:NM_015162:exon13:c.A1897G:p.M633V	exonic	ENSG00000103740	NA	nonsynonymous SNV	ENSG00000103740:ENST00000541759:exon9:c.A1171G:p.M391V,ENSG00000103740:ENST00000560817:exon9:c.A1171G:p.M391V,ENSG00000103740:ENST00000258873:exon13:c.A1897G:p.M633V	NA	NA	15q25.1	NA	NA	NA	NA	rs2304824	0.49	0.49	0.514	0.526757	0.498	0.2867	0.4409	0.73	0.59	0.49	0.29	0.48	0.73	0.5024	0.73	0.63	T	0.0	B	0.0	B	0.115	N	1.000	P	-1.355	N	1.71	T	-0.986	T	0.000	T	0.04	-0.485	1.769	-0.040	0.105	-0.598	0.144	-0.484813	NA	0.75	0.499534	0.687842	NA	0.558	NA	5.8333994
1069	1	152733301	152733301	T	A	exonic	KPRP	NA	nonsynonymous SNV	KPRP:NM_001025231:exon2:c.T1237A:p.C413S	exonic	ENSG00000203786	NA	nonsynonymous SNV	ENSG00000203786:ENST00000606109:exon1:c.T1237A:p.C413S,ENSG00000203786:ENST00000368773:exon2:c.T1237A:p.C413S	NA	NA	1q21.3	NA	NA	NA	NA	rs4329520	0.51	0.51	0.51	0.490216	0.5159	0.4177	0.4914	0.5787	0.4182	0.5	0.43	0.54	0.6	0.4814	0.6	0.72	T	0.017	B	0.013	B	0.025	N	1.000	P	1.65	L	1.83	T	-0.968	T	0.012	T	0.033	2.221	13.38	-0.312	-0.142	-0.196	0.340	2.220864	2.220864	0.1	0.502674	0.553563	NA	0.464	NA	5.8333594
1069	7	5399044	5399044	C	G	exonic	TNRC18	NA	synonymous SNV	TNRC18:NM_001080495:exon15:c.G4818C:p.S1606S	exonic	ENSG00000182095	NA	synonymous SNV	ENSG00000182095:ENST00000440081:exon2:c.G288C:p.S96S,ENSG00000182095:ENST00000399537:exon15:c.G4818C:p.S1606S,ENSG00000182095:ENST00000430969:exon15:c.G4818C:p.S1606S	NA	NA	7p22.1	Score=751;Name=V$TCF11MAFG_01	NA	NA	NA	rs12531309	0.27	0.27	0.245	0.255192	0.2594	0.2808	0.2536	0.2489	0.2342	0.28	0.26	0.28	0.25	0.2843	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.022262	NA	NA	0.289866	0.248988	NA	0.217	NA	5.8331006
1069	6	26044369	26044369	A	G	upstream	HIST1H2BB	NA	NA	NA	ncRNA_exonic	ENSG00000234816	NA	NA	NA	Score=701;Name=lod=944	NA	6p22.2	NA	Name=TCF12,PAX5-N19,PAX5-C20,NFKB,HEY1,Pol2-4H8,Pol2,ZBTB33,TAF1,Pol2(b)	Name=34	NA	rs2032447	0.7	0.7	0.596	0.689097	0.6531	0.8423	0.6859	0.6543	0.6176	0.64	0.87	0.67	0.64	0.681	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.336391	NA	NA	NA	NA	NA	0.623	NA	5.8325666
1069	11	1213440	1213440	T	C	intergenic	MUC2,MUC5B	dist=109023;dist=30855	NA	NA	intergenic	ENSG00000215182,ENSG00000117983	dist=51079;dist=30856	NA	NA	Score=415;Name=lod=65	NA	11p15.5	Score=866;Name=V$RORA2_01	NA	Name=35	NA	rs61867533	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5008	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.343246	2.343246	NA	NA	NA	NA	0.007	NA	5.8325334
1069	15	78200697	78200697	A	G	intergenic	LOC253044,LOC645752	dist=259116;dist=5862	NA	NA	intergenic	ENSG00000260139,ENSG00000260776	dist=3681;dist=5862	NA	NA	Score=574;Name=lod=287	NA	15q24.3	NA	Name=SMC3_(ab9263),CTCFL_(SC-98982),CTCF,ZNF263,CTCF_(SC-5916),PAX5-C20,CTCF_(C-20),c-Myc	Name=103	NA	rs12909639	0.33	0.33	0.285	0.295727	0.501	0.1667	0.2896	0.267	0.2607	0.49	0.18	0.33	0.26	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.195509	NA	NA	NA	NA	NA	0.449	NA	5.8323334
1069	17	16733874	16733874	G	A	ncRNA_exonic	KRT16P2	NA	NA	NA	ncRNA_exonic	ENSG00000227300	NA	NA	NA	Score=425;Name=lod=71	NA	17p11.2	Score=817;Name=V$AP4_01	NA	NA	NA	rs2608256	0.82	0.82	0.861	0.854034	0.835	0.9345	0.8429	0.857	0.7945	0.8	0.86	0.83	0.78	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.304783	NA	NA	NA	NA	NA	0.101	NA	5.8316666
1069	5	95234392	95234392	A	C	exonic	ELL2	NA	synonymous SNV	ELL2:NM_012081:exon8:c.T1077G:p.S359S	exonic	ENSG00000118985	NA	synonymous SNV	ENSG00000118985:ENST00000237853:exon8:c.T1077G:p.S359S	Score=638;Name=lod=524	NA	5q15	NA	NA	NA	NA	rs3777202	0.37	0.37	0.323	0.385383	0.2803	0.4325	0.2464	0.5318	0.3456	0.29	0.43	0.24	0.52	0.2954	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.897819	NA	NA	0.259772	0.481364	NA	0.42	NA	5.8311946
1069	20	33063830	33063830	A	C	intronic	ITCH	NA	NA	NA	ncRNA_exonic	ENSG00000181741	NA	NA	NA	Score=519;Name=lod=172	NA	20q11.22	NA	NA	Name=65	NA	rs6059860	0.42	0.42	0.42	0.393371	0.503	0.4048	0.3069	0.3427	0.3988	0.53	0.41	0.37	0.3	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.761813	NA	NA	NA	NA	NA	0.413	NA	5.8303333
1069	7	145281594	145281594	C	T	intergenic	TPK1,CNTNAP2	dist=748448;dist=531859	NA	NA	ncRNA_exonic	ENSG00000231839	NA	NA	NA	Score=608;Name=lod=395	NA	7q35	NA	NA	Name=7	NA	rs13226596	0.16	0.16	0.161	0.172125	0.17	0.0506	0.1499	0.2564	0.2014	0.17	0.06	0.16	0.26	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.346059	NA	NA	NA	NA	NA	0.174	NA	5.83
1069	19	19626734	19626734	A	G	upstream	NDUFA13,TSSK6	NA	NA	NA	UTR5	ENSG00000178093,ENSG00000186010	ENST00000360913:c.-498T>C;ENST00000502506:c.-314A>G,ENST00000507754:c.-314A>G	NA	NA	NA	NA	19p13.11	NA	Name=KAP1,HA-E2F1,CTCF	Name=18	NA	rs80007081	0.12	0.12	0.119	0.11901	0.17	NA	0.1167	0.1634	0.1309	0.15	NA	0.14	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.425805	NA	NA	NA	NA	NA	0.109	NA	5.83
1069	19	49362001	49362001	T	A	intronic	PLEKHA4	NA	NA	NA	intronic	ENSG00000105559	NA	NA	NA	NA	NA	19q13.33	NA	Name=SIX5,c-Myc,IRF1,ELF1_(SC-631),BAF170,Znf143_(16618-1-AP),ETS1,YY1_(C-20)	Name=32	NA	rs17206714	0.07	0.07	0.06	0.0561102	0.17	NA	0.0677	0.0045	0.0583	0.17	NA	0.07	0.01	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.440012	NA	NA	NA	NA	NA	0.109	NA	5.83
1069	20	48746189	48746189	C	T	exonic	TMEM189,TMEM189-UBE2V1	NA	synonymous SNV	TMEM189:NM_001162505:exon4:c.G363A:p.P121P,TMEM189:NM_199129:exon4:c.G372A:p.P124P,TMEM189-UBE2V1:NM_199203:exon4:c.G372A:p.P124P	exonic	ENSG00000124208,ENSG00000240849	NA	synonymous SNV	ENSG00000240849:ENST00000371656:exon3:c.G147A:p.P49P,ENSG00000124208:ENST00000341698:exon4:c.G372A:p.P124P,ENSG00000240849:ENST00000371650:exon4:c.G363A:p.P121P,ENSG00000240849:ENST00000371652:exon4:c.G372A:p.P124P,ENSG00000240849:ENST00000557021:exon4:c.G372A:p.P124P	NA	NA	20q13.13	NA	Name=c-Myc	NA	NA	rs6122878	0.3	0.3	0.307	0.287141	0.2863	0.25	0.255	0.3238	0.2996	0.3	0.25	0.28	0.36	0.2789	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.357528	1.357528	NA	0.271628	0.302996	NA	0.181	NA	5.8298386
1069	19	50363175	50363175	A	G	intronic	PTOV1	NA	NA	NA	ncRNA_exonic	ENSG00000267896	NA	NA	NA	NA	NA	19q13.33	NA	Name=Pol2,Pol2-4H8	Name=9	NA	rs1290646	0.58	0.58	0.606	0.635383	0.504	0.5298	0.4971	0.8646	0.6677	0.5	0.52	0.5	0.83	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.103892	NA	NA	NA	NA	NA	0.406	NA	5.8293333
1069	4	38937372	38937372	T	C	exonic	FAM114A1	NA	synonymous SNV	FAM114A1:NM_138389:exon13:c.T1497C:p.S499S	exonic	ENSG00000197712	NA	synonymous SNV	ENSG00000197712:ENST00000515037:exon11:c.T876C:p.S292S,ENSG00000197712:ENST00000358869:exon13:c.T1497C:p.S499S	Score=558;Name=lod=248	NA	4p14	NA	Name=CTCF	NA	NA	rs2271031	0.69	0.69	0.701	0.724441	0.5855	0.6905	0.6931	0.8888	0.7025	0.56	0.69	0.65	0.89	0.6564	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.773911	NA	NA	0.595698	0.840599	NA	0.775	NA	5.8290686
1069	2	113498566	113498566	A	G	exonic	CKAP2L	NA	nonsynonymous SNV	CKAP2L:NM_152515:exon8:c.T1841C:p.L614S	exonic	ENSG00000169607	NA	nonsynonymous SNV	ENSG00000169607:ENST00000302450:exon8:c.T1841C:p.L614S,ENSG00000169607:ENST00000541405:exon8:c.T1346C:p.L449S	NA	NA	2q13	NA	NA	NA	NA	rs3811040	0.46	0.46	0.423	0.422524	0.508	0.6895	0.5519	0.056	0.4632	0.5	0.7	0.54	0.06	0.4926	0.7	0.73	T	0.035	B	0.034	B	0.145	N	1.000	P	0	N	2.06	T	-0.976	T	0.000	T	0.076	-1.597	0.014	-0.529	-0.079	-0.101	7.213	-1.59717	NA	0.75	0.504419	0.125057	NA	0.435	NA	5.8283144
1069	1	186113852	186113852	G	C	ncRNA_intronic	MIR548F1	NA	NA	NA	intronic	ENSG00000143341	NA	NA	NA	Score=579;Name=lod=301	NA	1q31.1	NA	NA	Name=17	NA	rs17531405	0.1	0.1	0.083	0.0676917	0.1869	0.0149	0.0994	0.0076	0.0583	0.19	0.02	0.14	0.01	0.1354	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.13867	3.13867	NA	0.183023	0.039492	NA	0.094	NA	5.8280103
1069	12	11338613	11338613	C	G	exonic	TAS2R42	NA	nonsynonymous SNV	TAS2R42:NM_181429:exon1:c.G931C:p.A311P	exonic	ENSG00000186136	NA	nonsynonymous SNV	ENSG00000186136:ENST00000334266:exon1:c.G931C:p.A311P	NA	NA	12p13.2	NA	NA	NA	NA	rs1650017	0.67	0.67	0.758	0.760783	0.8688	0.9514	0.8473	0.407	0.8701	0.73	0.86	0.74	0.31	0.8372	0.86	1	T	0.0	B	0.0	B	0.393	N	1.000	P	0	N	5.57	T	-1.007	T	0.000	T	0.033	-1.941	0.007	-1.72	-0.746	-2.849	0.475	-1.940645	NA	1	0.8	0.394235	NA	NA	NA	5.8273334
1069	12	6562836	6562836	G	A	exonic	TAPBPL	NA	synonymous SNV	TAPBPL:NM_018009:exon3:c.G519A:p.P173P	exonic	ENSG00000139192	NA	synonymous SNV	ENSG00000139192:ENST00000544021:exon2:c.G288A:p.P96P,ENSG00000139192:ENST00000266556:exon3:c.G519A:p.P173P	NA	NA	12p13.31	Score=787;Name=V$ROAZ_01	NA	NA	NA	rs2041388	0.22	0.22	0.197	0.202875	0.2932	0.3224	0.1599	0.0136	0.273	0.29	0.33	0.16	0.01	0.2563	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.37945	NA	NA	0.290581	0.056514	NA	0.138	NA	5.8265856
1069	6	33643558	33643558	G	A	exonic	ITPR3	NA	synonymous SNV	ITPR3:NM_002224:exon25:c.G3207A:p.P1069P	exonic	ENSG00000096433	NA	synonymous SNV	ENSG00000096433:ENST00000605930:exon25:c.G3207A:p.P1069P,ENSG00000096433:ENST00000374316:exon26:c.G3207A:p.P1069P	NA	NA	6p21.31	Score=754;Name=V$MYOGNF1_01	NA	NA	NA	rs2229637	0.2	0.2	0.193	0.177716	0.2843	0.0704	0.245	0.1906	0.1135	0.27	0.09	0.22	0.18	0.2709	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.696059	NA	NA	0.285	0.195642	ID=COSM451318,COSM1487676;OCCURENCE=1(breast)	0.203	NA	5.8264666
1069	8	144688736	144688736	C	G	exonic	PYCRL	NA	nonsynonymous SNV	PYCRL:NM_023078:exon4:c.G486C:p.K162N	exonic	ENSG00000104524	NA	nonsynonymous SNV	ENSG00000104524:ENST00000220966:exon4:c.G486C:p.K162N,ENSG00000104524:ENST00000433751:exon4:c.G411C:p.K137N,ENSG00000104524:ENST00000377579:exon5:c.G39C:p.K13N	NA	NA	8q24.3	NA	NA	NA	NA	rs2242090	0.38	0.38	0.336	0.327077	0.5239	0.3879	0.3977	0.0809	0.3446	0.52	0.35	0.48	0.11	0.4443	0.54	0.17	T	.	.	.	.	0.467	N	1.000	P	.	.	-0.07	T	-0.961	T	0.000	T	0.016	0.813	8.27	0.47	0.166	-0.340	1.679	0.813088	NA	0.17	0.53873	0.137148	ID=COSM454155;OCCURENCE=2(breast)	0.268	NA	5.8264034
1069	10	129216658	129216658	T	C	exonic	DOCK1	NA	synonymous SNV	DOCK1:NM_001380:exon45:c.T4482C:p.I1494I	exonic	ENSG00000150760	NA	synonymous SNV	ENSG00000150760:ENST00000280333:exon45:c.T4482C:p.I1494I	NA	NA	10q26.2	Score=863;Name=V$OCT1_06	NA	NA	NA	rs2229600	0.33	0.33	0.313	0.31889	0.2575	0.4296	0.4222	0.2247	0.3221	0.26	0.44	0.38	0.26	0.3232	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.927589	NA	NA	0.259656	0.240648	NA	0.232	NA	5.8263106
1069	17	79804721	79804721	A	G	intronic	P4HB	NA	NA	NA	intronic	ENSG00000185624	NA	NA	NA	NA	NA	17q25.3	NA	Name=c-Myc	Name=9	NA	rs2070872	0.3	0.3	0.299	0.265775	0.174	0.2867	0.3199	0.4085	0.1074	0.18	0.34	0.28	0.42	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.614074	NA	NA	NA	NA	NA	0.268	NA	5.826
1069	10	100167396	100167396	G	A	exonic	PYROXD2	NA	synonymous SNV	PYROXD2:NM_032709:exon4:c.C258T:p.R86R	exonic	ENSG00000119943	NA	synonymous SNV	ENSG00000119943:ENST00000370575:exon4:c.C258T:p.R86R	Score=550;Name=lod=230	NA	10q24.2	NA	NA	NA	NA	rs12763326	0.37	0.37	0.343	0.417732	0.2376	0.4395	0.3775	0.5053	0.4908	0.23	0.46	0.36	0.51	0.3377	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.06429	NA	NA	0.26593	0.473445	NA	0.304	NA	5.8254366
1069	7	808835	808835	G	A	intronic	HEATR2	NA	NA	NA	exonic	ENSG00000164818	NA	synonymous SNV	ENSG00000164818:ENST00000403952:exon1:c.G51A:p.T17T	NA	NA	7p22.3	NA	NA	Name=40	NA	rs140560123	0.01	0.01	0.008	0.00519169	0.003	NA	0.0014	0.0098	0.0092	0.004	NA	NA	0.02	0.0042	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.247004	NA	NA	0.000754	0.007991	NA	0.014	NA	5.8253793
1069	4	140811084	140811084	C	T	exonic	MAML3	NA	synonymous SNV	MAML3:NM_018717:exon2:c.G1506A:p.Q502Q	exonic	ENSG00000196782	NA	synonymous SNV	ENSG00000196782:ENST00000327122:exon1:c.G1038A:p.Q346Q,ENSG00000196782:ENST00000509479:exon2:c.G1506A:p.Q502Q	Score=565;Name=lod=263	NA	4q31.1	NA	NA	NA	NA	rs12506879	0.58	0.58	0.553	0.422524	0.501	0.4177	0.4481	0.3283	0.456	0.72	0.56	0.6	0.39	0.3406	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.252572	NA	NA	NA	NA	NA	0.007	NA	5.8250666
1069	4	1725071	1725071	A	G	intronic	TACC3	NA	NA	NA	intronic	ENSG00000013810	NA	NA	NA	NA	NA	4p16.3	NA	Name=PAX5-C20,EBF1_(C-8),TCF12,YY1_(C-20),Pol2	Name=19	NA	rs1665361	0.13	0.13	0.121	0.139377	0.175	0.0119	0.1239	0.2027	0.1595	0.17	0.01	0.13	0.2	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.223847	NA	NA	NA	NA	NA	0.058	NA	5.825
1069	19	10666112	10666112	G	A	intronic	KRI1	NA	NA	NA	intronic	ENSG00000129347	NA	NA	NA	NA	NA	19p13.2	NA	Name=ZNF263,CTCF	Name=9	NA	rs12459941	0.37	0.37	0.34	0.352037	0.175	0.6984	0.4841	0.1891	0.3037	0.17	0.73	0.43	0.2	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.135523	NA	NA	NA	NA	NA	0.246	NA	5.825
1070	1	181725110	181725110	T	C	exonic	CACNA1E	NA	synonymous SNV	CACNA1E:NM_001205294:exon28:c.T3951C:p.H1317H,CACNA1E:NM_000721:exon29:c.T4008C:p.H1336H,CACNA1E:NM_001205293:exon29:c.T4008C:p.H1336H	exonic	ENSG00000198216	NA	synonymous SNV	ENSG00000198216:ENST00000358338:exon28:c.T3804C:p.H1268H,ENSG00000198216:ENST00000360108:exon28:c.T3951C:p.H1317H,ENSG00000198216:ENST00000526775:exon28:c.T3951C:p.H1317H,ENSG00000198216:ENST00000357570:exon29:c.T3861C:p.H1287H,ENSG00000198216:ENST00000367567:exon29:c.T2829C:p.H943H,ENSG00000198216:ENST00000367570:exon29:c.T4008C:p.H1336H,ENSG00000198216:ENST00000367573:exon29:c.T4008C:p.H1336H	Score=638;Name=lod=522	NA	1q25.3	NA	NA	NA	NA	rs4652678	0.27	0.27	0.265	0.318291	0.2863	0.0754	0.3256	0.4856	0.3701	0.28	0.06	0.28	0.48	0.2845	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.031244	NA	NA	0.270924	0.419279	NA	0.29	NA	5.8249426
1070	18	63489378	63489378	C	T	exonic	CDH7	NA	synonymous SNV	CDH7:NM_004361:exon5:c.C687T:p.V229V,CDH7:NM_033646:exon5:c.C687T:p.V229V	exonic	ENSG00000081138	NA	synonymous SNV	ENSG00000081138:ENST00000323011:exon5:c.C687T:p.V229V,ENSG00000081138:ENST00000397968:exon5:c.C687T:p.V229V,ENSG00000081138:ENST00000536984:exon5:c.C687T:p.V229V	Score=675;Name=lod=740	NA	18q22.1	Score=928;Name=V$TCF11_01	NA	Name=3	NA	rs8097752	0.9	0.9	0.879	0.852835	0.9612	0.9831	0.9049	0.646	0.8497	0.96	0.99	0.93	0.65	0.9245	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.030764	NA	NA	0.956395	0.674308	NA	0.877	NA	5.8245716
1070	1	205030862	205030862	C	T	intronic	CNTN2	NA	NA	NA	intronic	ENSG00000184144	NA	NA	NA	NA	NA	1q32.1	NA	Name=CTCFL_(SC-98982),Znf143_(16618-1-AP),YY1_(C-20),NANOG_(SC-33759),SMC3_(ab9263),CTCF_(SC-5916),CTCF_(C-20),ELF1_(SC-631),Rad21,EBF1_(C-8),CTCF	Name=138	NA	rs41264869	0.23	0.23	0.2	0.23123	0.1759	0.3948	0.2622	0.0938	0.2832	0.18	0.41	0.27	0.09	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.142968	NA	NA	NA	NA	NA	0.145	NA	5.8241
1070	6	30569489	30569489	C	T	intronic	PPP1R10	NA	NA	NA	intronic	ENSG00000204569	NA	NA	NA	NA	NA	6p21.33	NA	Name=Pol2	Name=9	NA	rs7759666	0.11	0.11	0.093	0.109225	0.1759	0.0605	0.1527	0.0091	0.1953	0.18	0.08	0.14	0.02	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.542431	1.542431	NA	NA	NA	NA	0.094	NA	5.8241
1070	7	99964661	99964661	A	G	intronic	PILRB	NA	NA	NA	intronic	ENSG00000121716	NA	NA	NA	NA	NA	7q22.1	NA	Name=Pol2-4H8,EBF,SP1,Pol2	Name=21	NA	rs11769057	0.1	0.1	0.102	0.105032	0.1759	0.0278	0.1023	0.1074	0.1104	0.18	0.02	0.1	0.09	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.300259	NA	NA	NA	NA	NA	0.138	NA	5.8241
1070	7	99964789	99964789	T	G	intronic	PILRB	NA	NA	NA	intronic	ENSG00000121716	NA	NA	NA	NA	NA	7q22.1	NA	Name=ZEB1_(SC-25388),EBF,Pol2	Name=21	NA	rs11765869	0.09	0.09	0.073	0.081869	0.1759	0.0278	0.0937	0.0234	0.1115	0.18	0.02	0.09	0.02	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.581521	NA	NA	NA	NA	NA	0.094	NA	5.8241
1070	11	8720615	8720615	C	A	intronic	ST5	NA	NA	NA	intronic	ENSG00000166444	NA	NA	NA	NA	NA	11p15.4	NA	Name=TCF12	Name=3	NA	rs2270958	0.19	0.19	0.178	0.177716	0.1759	0.247	0.17	0.0976	0.2219	0.19	0.24	0.21	0.1	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.693052	1.693052	NA	NA	NA	NA	0.181	NA	5.8241
1070	4	36069805	36069805	G	A	exonic	ARAP2	NA	synonymous SNV	ARAP2:NM_015230:exon33:c.C4839T:p.A1613A	exonic	ENSG00000047365	NA	synonymous SNV	ENSG00000047365:ENST00000303965:exon33:c.C4839T:p.A1613A	Score=313;Name=lod=25	NA	4p14	NA	NA	NA	NA	rs7657166	0.15	0.15	0.149	0.155351	0.2803	0.0913	0.2061	0.0204	0.2393	0.26	0.08	0.21	0.03	0.2409	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.363273	NA	NA	0.321512	0.071266	NA	0.232	NA	5.8239546
1070	7	34125420	34125420	G	T	exonic	BMPER	NA	synonymous SNV	BMPER:NM_133468:exon14:c.G1461T:p.P487P	exonic	ENSG00000164619	NA	synonymous SNV	ENSG00000164619:ENST00000426693:exon13:c.G1461T:p.P487P,ENSG00000164619:ENST00000297161:exon14:c.G1461T:p.P487P	NA	NA	7p14.3	Score=830;Name=V$PAX4_01	NA	NA	NA	rs77064045	0.2	0.2	0.211	0.189297	0.3141	0.1002	0.2089	0.1573	0.182	0.3	0.1	0.23	0.14	0.2434	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.868596	NA	NA	0.285581	0.172492	NA	0.268	NA	5.8235856
1070	17	73519413	73519413	C	T	exonic	TSEN54	NA	nonsynonymous SNV	TSEN54:NM_207346:exon9:c.C1310T:p.A437V	exonic	ENSG00000182173	NA	nonsynonymous SNV	ENSG00000182173:ENST00000333213:exon9:c.C1310T:p.A437V	NA	NA	17q25.1	NA	NA	NA	NA	rs8064529	0.56	0.56	0.579	0.561302	0.6839	0.4415	0.4597	0.5514	0.6442	0.7	0.46	0.48	0.53	0.6241	0.7	0.32	T	0.698	P	0.118	B	0.183	N	1.000	P	1.7	L	-0.1	T	-0.921	T	0.000	T	0.02	1.206	9.897	0.513	0.259	0.335	5.748	1.205751	NA	0.49	0.70186	0.580345	NA	0.514	NA	5.8234734
1070	1	16321240	16321240	G	A	intergenic	ZBTB17,C1orf64	dist=18613;dist=9491	NA	NA	ncRNA_exonic	ENSG00000224966	NA	NA	NA	NA	NA	1p36.13	NA	Name=YY1_(C-20),SMC3_(ab9263),CTCF,CTCF_(SC-5916),CTCF_(C-20),PAX5-C20,FOXA1_(C-20),Znf143_(16618-1-AP),FOXA2_(SC-6554),FOXA1_(SC-101058),Rad21	Name=137	NA	rs4661680	0.11	0.11	0.081	0.114018	0.1769	0.0089	0.2968	0.0098	0.1687	0.17	0.01	0.25	0.01	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.791055	NA	NA	NA	NA	NA	0.058	NA	5.8231
1070	19	35450229	35450229	C	T	exonic	ZNF792	NA	nonsynonymous SNV	ZNF792:NM_175872:exon4:c.G530A:p.R177Q	exonic	ENSG00000180884	NA	nonsynonymous SNV	ENSG00000180884:ENST00000605484:exon2:c.G329A:p.R110Q,ENSG00000180884:ENST00000404801:exon4:c.G530A:p.R177Q	NA	NA	19q13.11	NA	NA	NA	NA	rs2651079	0.62	0.62	0.664	0.626198	0.5149	0.5942	0.3991	0.9123	0.5481	0.51	0.62	0.46	0.92	0.5224	0.92	1	T	0.0	B	0.0	B	.	.	1.000	P	-0.87	N	3.54	T	-1.018	T	0.000	T	0.059	-1.135	0.114	-0.202	-0.420	-0.565	2.958	-1.134845	NA	1	0.473023	0.83182	NA	0.623	NA	5.8230104
1070	2	130951566	130951566	G	A	exonic	TUBA3E	NA	synonymous SNV	TUBA3E:NM_207312:exon4:c.C849T:p.H283H	exonic	ENSG00000152086	NA	synonymous SNV	ENSG00000152086:ENST00000312988:exon4:c.C849T:p.H283H	Score=505;Name=lod=150	NA	2q21.1	NA	NA	NA	NA	rs7340193	0.78	0.78	0.87	NA	NA	NA	NA	NA	NA	0.78	0.9	0.79	0.61	0.844	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.630717	NA	NA	NA	NA	NA	0.754	NA	5.8226666
1070	1	43909265	43909265	T	C	intronic	SZT2	NA	NA	NA	intronic	ENSG00000198198	NA	NA	NA	Score=463;Name=lod=102	NA	1p34.2	Score=787;Name=V$PAX5_01	Name=Pol2(phosphoS2)	NA	NA	rs2255632	0.29	0.29	0.268	0.221046	0.4254	0.1329	0.3948	0.1233	0.1104	0.43	0.15	0.43	0.14	0.331	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.239807	NA	NA	0.421977	0.153881	NA	0.377	NA	5.821623
1070	11	64010085	64010085	A	G	intronic	FKBP2	NA	NA	NA	intronic	ENSG00000173486	NA	NA	NA	NA	NA	11q13.1	NA	Name=Pol2(phosphoS2),Pol2,E2F6_(H-50),HEY1,Pol2-4H8,HDAC2_(SC-6296)	Name=72	NA	rs2070765	0.17	0.17	0.152	0.15635	0.1789	0.1865	0.3199	0.0915	0.0736	0.18	0.18	0.28	0.08	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.63239	NA	NA	NA	NA	NA	0.116	NA	5.8211
1070	3	53220215	53220215	G	A	exonic	PRKCD	NA	synonymous SNV	PRKCD:NM_212539:exon12:c.G1119A:p.E373E,PRKCD:NM_006254:exon13:c.G1119A:p.E373E	exonic	ENSG00000163932	NA	synonymous SNV	ENSG00000163932:ENST00000394729:exon12:c.G1119A:p.E373E,ENSG00000163932:ENST00000330452:exon13:c.G1119A:p.E373E	Score=401;Name=lod=57	NA	3p21.1	NA	NA	NA	NA	rs2230494	0.29	0.29	0.269	0.282149	0.2863	0.2202	0.2925	0.3411	0.2546	0.29	0.22	0.3	0.35	0.2757	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.722947	NA	NA	0.283953	0.321607	ID=COSM1179808,COSM1179809;OCCURENCE=1(prostate)	0.232	NA	5.8207136
1070	21	45784271	45784271	G	A	intronic	TRPM2	NA	NA	NA	intronic	ENSG00000142185	NA	NA	NA	NA	NA	21q22.3	NA	Name=CTCF,Rad21,CTCF_(SC-5916)	Name=7	NA	rs2276252	0.13	0.13	0.116	0.120607	0.1799	0.129	0.1441	0.0477	0.1329	0.18	0.13	0.15	0.05	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.140215	NA	NA	NA	NA	NA	0.13	NA	5.8201
1070	5	180043388	180043388	G	A	exonic	FLT4	NA	synonymous SNV	FLT4:NM_002020:exon23:c.C3198T:p.P1066P,FLT4:NM_182925:exon23:c.C3198T:p.P1066P	exonic	ENSG00000037280	NA	synonymous SNV	ENSG00000037280:ENST00000512795:exon4:c.C312T:p.P104P,ENSG00000037280:ENST00000261937:exon23:c.C3198T:p.P1066P,ENSG00000037280:ENST00000393347:exon23:c.C3198T:p.P1066P,ENSG00000037280:ENST00000502649:exon23:c.C3198T:p.P1066P	Score=673;Name=lod=723	NA	5q35.3	NA	NA	NA	NA	rs1130378	0.23	0.23	0.224	0.240415	0.2823	0.2619	0.1888	0.1566	0.3252	0.27	0.27	0.25	0.12	0.27	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.848358	NA	NA	0.294884	0.169995	NA	0.203	NA	5.8194826
1070	X	295132	295132	T	C	exonic	PPP2R3B	NA	synonymous SNV	PPP2R3B:NM_013239:exon13:c.A1698G:p.A566A	exonic	ENSG00000167393	NA	synonymous SNV	ENSG00000167393:ENST00000390665:exon13:c.A1698G:p.A566A	Score=300;Name=lod=22	NA	Xp22.33	NA	NA	NA	NA	rs1133530	0.52	0.52	0.55087	NA	NA	NA	NA	NA	NA	0.41	0.48	0.43	0.81	0.4386	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.258803	NA	NA	0.408644	0.775402	NA	0.457	NA	5.8194226
1070	2	75115108	75115108	A	G	exonic	HK2	NA	synonymous SNV	HK2:NM_000189:exon16:c.A2298G:p.L766L	exonic	ENSG00000159399	NA	synonymous SNV	ENSG00000159399:ENST00000290573:exon16:c.A2298G:p.L766L,ENSG00000159399:ENST00000409174:exon16:c.A2214G:p.L738L	Score=645;Name=lod=557	NA	2p12	NA	Name=c-Fos	NA	NA	rs10194657	0.55	0.55	0.557	0.524161	0.6282	0.4821	0.4654	0.4236	0.638	0.63	0.51	0.52	0.48	0.5907	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.343879	1.343879	NA	0.628372	0.460735	ID=COSM148879;OCCURENCE=1(stomach)	0.536	NA	5.8193946
1070	7	128243651	128243651	A	G	intergenic	METTL2B,FLJ45340	dist=100673;dist=37644	NA	NA	ncRNA_intronic	ENSG00000242588	NA	NA	NA	Score=480;Name=lod=119	NA	7q32.1	Score=899;Name=V$HAND1E47_01	NA	NA	NA	rs28526579	0.15	0.15	0.139	0.130591	0.1809	0.0526	0.1484	0.1899	0.0665	0.18	0.05	0.18	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.165936	NA	NA	NA	NA	NA	0.13	NA	5.8191
1070	5	138266546	138266546	G	A	exonic	CTNNA1	NA	synonymous SNV	CTNNA1:NM_001903:exon16:c.G2220A:p.S740S	exonic	ENSG00000044115	NA	synonymous SNV	ENSG00000044115:ENST00000520520:exon2:c.G45A:p.S15S,ENSG00000044115:ENST00000540387:exon10:c.G1110A:p.S370S,ENSG00000044115:ENST00000355078:exon15:c.G1911A:p.S637S,ENSG00000044115:ENST00000518825:exon15:c.G2220A:p.S740S,ENSG00000044115:ENST00000302763:exon16:c.G2220A:p.S740S	Score=603;Name=lod=376	NA	5q31.2	NA	NA	NA	NA	rs1059110	0.25	0.25	0.257	0.249002	0.2714	0.0079	0.2695	0.4259	0.2209	0.27	0.01	0.29	0.45	0.2796	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.319869	1.319869	NA	0.297326	0.407853	NA	0.29	NA	5.8183406
1070	20	3677736	3677736	T	G	exonic	SIGLEC1	NA	synonymous SNV	SIGLEC1:NM_023068:exon9:c.A2376C:p.V792V	exonic	ENSG00000088827	NA	synonymous SNV	ENSG00000088827:ENST00000202578:exon9:c.A2376C:p.V792V,ENSG00000088827:ENST00000344754:exon9:c.A2376C:p.V792V	Score=346;Name=lod=34	NA	20p13	Score=833;Name=V$GR_Q6	NA	NA	NA	rs673114	0.69	0.69	0.665	0.717652	0.5805	0.7708	0.6729	0.826	0.6892	0.59	0.74	0.65	0.8	0.6631	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.308966	NA	NA	0.605233	0.77475	NA	0.493	NA	5.8178336
1070	7	24854765	24854765	G	A	exonic	OSBPL3	NA	synonymous SNV	OSBPL3:NM_145322:exon17:c.C1884T:p.S628S,OSBPL3:NM_145320:exon18:c.C1992T:p.S664S,OSBPL3:NM_145321:exon18:c.C1977T:p.S659S,OSBPL3:NM_015550:exon19:c.C2085T:p.S695S	exonic	ENSG00000070882	NA	synonymous SNV	ENSG00000070882:ENST00000409069:exon16:c.C1884T:p.S628S,ENSG00000070882:ENST00000396429:exon17:c.C1977T:p.S659S,ENSG00000070882:ENST00000396431:exon17:c.C1992T:p.S664S,ENSG00000070882:ENST00000431825:exon17:c.C1884T:p.S628S,ENSG00000070882:ENST00000352860:exon18:c.C1992T:p.S664S,ENSG00000070882:ENST00000353930:exon18:c.C1977T:p.S659S,ENSG00000070882:ENST00000313367:exon19:c.C2085T:p.S695S	Score=595;Name=lod=349	NA	7p15.3	NA	NA	NA	NA	rs1044956	0.37	0.37	0.334	0.383387	0.2475	0.7371	0.3646	0.1051	0.5481	0.24	0.74	0.39	0.11	0.3476	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.998288	NA	NA	0.253953	0.142079	NA	0.319	NA	5.8176136
1070	12	111926255	111926255	T	G	intronic	ATXN2	NA	NA	NA	intronic	ENSG00000204842	NA	NA	NA	NA	NA	12q24.12	NA	Name=FOXA1_(SC-101058),FOXA2_(SC-6554),RXRA,FOXA1_(C-20)	Name=59	NA	rs78209549	0.04	0.04	0.033	0.0297524	0.0606	NA	0.062	0.0144	0.0266	0.06	NA	0.08	0.02	0.0527	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.831266	1.831266	NA	0.069186	0.022242	NA	0.058	NA	5.817514
1070	19	12076060	12076060	G	C	intronic	ZNF763	NA	NA	NA	intronic	ENSG00000197054,ENSG00000267179	NA	NA	NA	NA	NA	19p13.2	NA	Name=Pol2,TAF7_(SQ-8)	Name=130	NA	rs7250805	0.11	0.11	0.118	0.131589	0.0606	0.0278	0.0533	0.3555	0.0644	0.05	0.04	0.06	0.34	0.0744	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.172454	NA	NA	0.048953	0.30881	NA	0.152	NA	5.816047
1070	2	120438523	120438523	A	G	exonic	TMEM177	NA	nonsynonymous SNV	TMEM177:NM_001105198:exon2:c.A94G:p.I32V,TMEM177:NM_001105199:exon2:c.A94G:p.I32V,TMEM177:NM_030577:exon2:c.A94G:p.I32V	exonic	ENSG00000144120	NA	nonsynonymous SNV	ENSG00000144120:ENST00000272521:exon2:c.A94G:p.I32V,ENSG00000144120:ENST00000401466:exon2:c.A94G:p.I32V,ENSG00000144120:ENST00000409951:exon2:c.A94G:p.I32V,ENSG00000144120:ENST00000424086:exon2:c.A94G:p.I32V,ENSG00000144120:ENST00000445518:exon2:c.A94G:p.I32V	Score=412;Name=lod=63	NA	2q14.2	NA	NA	NA	NA	rs13011768	0.78	0.78	0.738	0.778155	0.8439	0.8284	0.8285	0.6029	0.8599	0.85	0.81	0.8	0.61	0.83	0.85	0.58	T	0.001	B	0.002	B	0.099	N	0.908	P	0.95	L	2.3	T	-1.035	T	0.000	T	0.047	-0.787	0.712	1.37	0.283	0.070	6.110	-0.786875	NA	0.54	0.844186	0.629596	NA	0.819	NA	5.8152474
1070	19	47588325	47588325	G	A	exonic	ZC3H4	NA	synonymous SNV	ZC3H4:NM_015168:exon8:c.C1095T:p.D365D	exonic	ENSG00000130749	NA	synonymous SNV	ENSG00000130749:ENST00000253048:exon8:c.C1095T:p.D365D	Score=272;Name=lod=17	NA	19q13.32	NA	NA	NA	NA	rs2287842	0.22	0.22	0.211	0.208267	0.2972	0.2579	0.2882	0.0492	0.2239	0.3	0.24	0.27	0.04	0.2688	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.444665	NA	NA	0.285427	0.091655	NA	0.181	NA	5.8152396
1070	6	57512529	57512529	C	A	exonic	PRIM2	NA	unknown	UNKNOWN	UTR3	ENSG00000146143	ENST00000607273:c.*316C>A	NA	NA	Score=429;Name=lod=74	NA	6p11.2	Score=756;Name=V$MEF2_04	NA	NA	NA	rs5001076	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4992	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.491392	2.491392	0.01	0.352248	0.370818	NA	0.159	NA	5.8152187
1071	6	29274486	29274486	T	C	exonic	OR14J1	NA	nonsynonymous SNV	OR14J1:NM_030946:exon1:c.T20C:p.M7T	exonic	ENSG00000204695	NA	nonsynonymous SNV	ENSG00000204695:ENST00000377160:exon1:c.T20C:p.M7T	NA	NA	6p22.1	NA	NA	NA	NA	rs9257694	0.4	0.4	0.395	0.36901	0.5288	0.3244	0.4251	0.2519	0.3691	0.55	0.31	0.44	0.25	0.4733	0.55	0.08	T	0.001	B	0.002	B	0.598	N	1.000	P	0.59	N	8.11	T	-1.003	T	0.000	T	0.035	0.906	8.684	-0.996	-0.232	-0.478	1.716	0.90573	NA	0.08	0.516242	0.327598	NA	0.319	NA	5.8149914
1071	14	107012994	107012994	A	G	intergenic	LINC00221,NONE	dist=61465;dist=NONE	NA	NA	exonic	ENSG00000211965	NA	nonsynonymous SNV	ENSG00000211965:ENST00000390625:exon2:c.T301C:p.Y101H	NA	NA	14q32.33	NA	Name=CTCF	NA	NA	rs140678750	0.0032	0.0032	0.004	0.00259585	0.008	NA	0.0029	NA	0.0031	0.01	0.0017	0.0028	NA	0.0034	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.501924	1.501924	0.03	0.007107	0.000508	NA	NA	NA	5.8148264
1071	14	35761675	35761675	C	G	UTR5	PSMA6	NM_002791:c.-8C>G	NA	NA	UTR5	ENSG00000100902	ENST00000554541:c.-8C>G,ENST00000261479:c.-8C>G,ENST00000554961:c.-8C>G,ENST00000554620:c.-8C>G,ENST00000553809:c.-8C>G,ENST00000553688:c.-8C>G,ENST00000555764:c.-16511C>G	NA	NA	NA	NA	14q13.2	NA	Name=CEBPB,CHD2_(N-1250),ELF1_(SC-631),FOXA1_(SC-101058),Max,Oct-2,TCF4,Pol2,SP1,Mxi1_(bHLH),TR4,YY1_(C-20),TAF1,GABP,POU2F2,USF-1,TBP,NFKB,HEY1,c-Myc,SIX5,RFX5_(N-494),HDAC2_(SC-6296),Pol2-4H8,HA-E2F1,JunD,Pol2(b),ELK4	NA	NA	rs1048990	0.19	0.19	0.164	0.190296	0.164	0.37	0.2046	0.0318	0.2362	0.17	0.36	0.18	0.05	0.1849	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.904489	NA	NA	0.170233	0.054244	NA	0.21	CLINSIG=other;CLNDBN=Myocardial_infarction;CLNREVSTAT=single;CLNACC=RCV000007198.1;CLNDSDB=MedGen:SNOMED_CT;CLNDSDBID=C0027051:22298006	5.8142004
1071	20	25276108	25276108	G	A	intronic	ABHD12,PYGB	NA	NA	NA	intronic	ENSG00000100994,ENSG00000100997	NA	NA	NA	NA	NA	20p11.21	NA	Name=CTCF,Pol2	Name=7	NA	rs2424705	0.2	0.2	0.177	0.162939	0.1859	0.3492	0.1297	0.053	0.1196	0.19	0.35	0.16	0.06	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.263528	NA	NA	NA	NA	NA	0.094	NA	5.8141
1071	19	7550844	7550844	G	A	exonic	PEX11G	NA	synonymous SNV	PEX11G:NM_001270539:exon2:c.C129T:p.S43S,PEX11G:NM_080662:exon2:c.C129T:p.S43S	exonic	ENSG00000104883	NA	synonymous SNV	ENSG00000104883:ENST00000221480:exon2:c.C129T:p.S43S	NA	NA	19p13.2	Score=799;Name=V$PPARG_03	NA	NA	NA	rs34970001	0.26	0.26	0.272	0.255192	0.3032	0.2083	0.255	0.2572	0.2515	0.3	0.23	0.23	0.27	0.2643	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.980698	NA	NA	0.285814	0.245801	NA	0.138	NA	5.8133526
1071	1	38030609	38030609	C	T	intronic	DNALI1	NA	NA	NA	intronic	ENSG00000163879	NA	NA	NA	Score=573;Name=lod=283	NA	1p34.3	NA	NA	Name=2	NA	rs41267315	0.03	0.03	0.017	0.0231629	0.0547	0.0089	0.0202	0.003	0.0348	0.06	0.0035	0.02	0.0041	0.054	0.078	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.073216	4.073216	NA	0.078023	0.019065	NA	0.036	NA	5.813277
1071	5	146085921	146085921	C	G	intronic	PPP2R2B	NA	NA	NA	intronic	ENSG00000156475	NA	NA	NA	NA	NA	5q32	NA	Name=CTCF_(SC-5916),CTCF	Name=5	NA	rs77282119	0.23	0.23	0.198	0.208466	0.1869	0.4206	0.2118	0.0893	0.1708	0.18	0.41	0.19	0.11	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.732106	NA	NA	NA	NA	NA	0.13	NA	5.8131
1071	19	38956803	38956803	G	A	exonic	RYR1	NA	synonymous SNV	RYR1:NM_000540:exon24:c.G2943A:p.T981T,RYR1:NM_001042723:exon24:c.G2943A:p.T981T	exonic	ENSG00000196218	NA	synonymous SNV	ENSG00000196218:ENST00000355481:exon24:c.G2943A:p.T981T,ENSG00000196218:ENST00000359596:exon24:c.G2943A:p.T981T,ENSG00000196218:ENST00000360985:exon24:c.G2943A:p.T981T	NA	NA	19q13.2	Score=748;Name=V$MYOGNF1_01	NA	NA	NA	rs2228069	0.6	0.6	0.609	0.545527	0.6412	0.5298	0.6599	0.5212	0.4151	0.64	0.54	0.67	0.56	0.5962	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.957711	NA	NA	0.616306	0.559545	NA	0.536	CLINSIG=non-pathogenic|untested;CLNDBN=not_specified|not_provided,not_provided;CLNREVSTAT=single|not,not;CLNACC=RCV000079138.1|RCV000119602.1,RCV000119603.1;CLNDSDB=.|.,.;CLNDSDBID=.|.,.	5.8129606
1071	4	86797	86797	A	G	exonic	ZNF595	NA	unknown	UNKNOWN	ncRNA_exonic	ENSG00000255436	NA	NA	NA	NA	NA	4p16.3	NA	Name=KAP1,ZNF274,SETDB1	NA	NA	rs180742908	0.0037	0.0037	NA	0.00199681	0.0089	NA	0.0014	NA	NA	0.01	NA	0.0028	NA	0.0054	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.073377	NA	NA	0.006232	0.001873	NA	NA	NA	5.8128013
1071	1	19411129	19411129	A	G	exonic	UBR4	NA	synonymous SNV	UBR4:NM_020765:exon102:c.T14877C:p.H4959H	exonic	ENSG00000127481	NA	synonymous SNV	ENSG00000127481:ENST00000429347:exon12:c.T1446C:p.H482H,ENSG00000127481:ENST00000543981:exon14:c.T1869C:p.H623H,ENSG00000127481:ENST00000375224:exon17:c.T1998C:p.H666H,ENSG00000127481:ENST00000375217:exon102:c.T14856C:p.H4952H,ENSG00000127481:ENST00000375226:exon102:c.T14805C:p.H4935H,ENSG00000127481:ENST00000375254:exon102:c.T14877C:p.H4959H,ENSG00000127481:ENST00000375267:exon102:c.T14877C:p.H4959H	Score=629;Name=lod=481	NA	1p36.13	NA	NA	NA	Score=96;Name=19899_0_+_96	rs1043905	0.72	0.72	0.714	0.71885	0.6074	0.8105	0.7349	0.8366	0.5685	0.6	0.82	0.71	0.82	0.6447	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.087634	NA	NA	0.602209	0.806627	NA	0.732	NA	5.8123576
1071	15	70352968	70352968	C	G	exonic	TLE3	NA	synonymous SNV	TLE3:NM_001105192:exon9:c.G615C:p.S205S,TLE3:NM_005078:exon9:c.G615C:p.S205S,TLE3:NM_020908:exon9:c.G615C:p.S205S	exonic	ENSG00000140332	NA	synonymous SNV	ENSG00000140332:ENST00000539550:exon7:c.G447C:p.S149S,ENSG00000140332:ENST00000560589:exon7:c.G447C:p.S149S,ENSG00000140332:ENST00000558201:exon8:c.G633C:p.S211S,ENSG00000140332:ENST00000559048:exon8:c.G630C:p.S210S,ENSG00000140332:ENST00000560939:exon8:c.G630C:p.S210S,ENSG00000140332:ENST00000317509:exon9:c.G615C:p.S205S,ENSG00000140332:ENST00000440567:exon9:c.G594C:p.S198S,ENSG00000140332:ENST00000442299:exon9:c.G615C:p.S205S,ENSG00000140332:ENST00000451782:exon9:c.G615C:p.S205S,ENSG00000140332:ENST00000557907:exon9:c.G615C:p.S205S,ENSG00000140332:ENST00000557919:exon9:c.G615C:p.S205S,ENSG00000140332:ENST00000557997:exon9:c.G615C:p.S205S,ENSG00000140332:ENST00000558379:exon9:c.G615C:p.S205S,ENSG00000140332:ENST00000558939:exon9:c.G615C:p.S205S,ENSG00000140332:ENST00000559929:exon9:c.G645C:p.S215S,ENSG00000140332:ENST00000561453:exon9:c.G615C:p.S205S	Score=539;Name=lod=207	NA	15q23	NA	NA	NA	NA	rs2228176	0.27	0.27	0.234	0.210863	0.2952	0.2321	0.3329	0.1354	0.1176	0.32	0.25	0.35	0.15	0.272	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.431792	NA	NA	0.287195	0.150342	NA	0.246	NA	5.8122716
1071	3	52453893	52453893	C	T	exonic	PHF7	NA	synonymous SNV	PHF7:NM_016483:exon5:c.C231T:p.G77G,PHF7:NM_173341:exon5:c.C231T:p.G77G	exonic	ENSG00000010318	NA	synonymous SNV	ENSG00000010318:ENST00000327906:exon5:c.C231T:p.G77G,ENSG00000010318:ENST00000347025:exon5:c.C231T:p.G77G,ENSG00000010318:ENST00000478707:exon5:c.C231T:p.G77G	Score=582;Name=lod=310	NA	3p21.1	NA	Name=Egr-1	NA	NA	rs498778	0.97	0.97	0.97	0.971446	0.9404	0.9812	0.9424	0.9947	0.9826	0.94	0.99	0.94	0.99	0.9632	0.99	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-1.030	T	0.000	T	.	0.966	8.942	0.502	0.129	-0.160	0.846	0.966045	NA	NA	0.950814	0.982524	NA	0.978	NA	5.8122526
1071	1	226595647	226595647	C	G	UTR5	PARP1	NM_001618:c.-17G>C	NA	NA	UTR5	ENSG00000143799	ENST00000366794:c.-17G>C,ENST00000366792:c.-17G>C,ENST00000366791:c.-17G>C,ENST00000366790:c.-17G>C	NA	NA	NA	NA	1q42.12	NA	Name=E2F6_(H-50),ETS1,TAF1,GATA-1,Pol2(b),POU2F2,Mxi1_(bHLH),Pol2,Pol2(phosphoS2),BCL11A,YY1_(C-20),E2F1,TR4,Pol2-4H8,E2F6,ZNF263,c-Myc,Max,HEY1,ELF1_(SC-631),PAX5-N19,PAX5-C20,Oct-2,TBP	Name=147	NA	rs907187	0.25	0.25	0.175	0.199081	0.163	0.4375	0.353	0.0371	0.1002	0.18	0.46	0.33	0.06	0.2035	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.605997	1.605997	NA	0.154759	0.0495	ID=COSN392383;OCCURENCE=1(lung)	NA	NA	5.8120744
1071	9	132597062	132597062	A	C	intronic	C9orf78	NA	NA	NA	intronic	ENSG00000136819	NA	NA	NA	NA	NA	9q34.11	NA	Name=ELF1_(SC-631)	Name=8	NA	rs41278736	0.07	0.07	0.081	0.0838658	0.0606	0.0099	0.0562	0.1815	0.0716	0.05	0.02	0.06	0.16	0.0644	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.002578	NA	NA	0.063256	0.157739	NA	0.145	NA	5.811744
1071	12	107914579	107914579	G	A	intronic	BTBD11	NA	NA	NA	intronic	ENSG00000151136	NA	NA	NA	NA	NA	12q23.3	NA	Name=GATA3_(SC-268),p300,FOXA1_(C-20)	Name=4	NA	rs11113367	0.29	0.29	0.297	0.28774	0.1889	0.3105	0.3674	0.3994	0.1585	0.19	0.31	0.31	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.858018	NA	NA	NA	NA	NA	0.246	NA	5.8111
1071	7	100465355	100465355	C	T	intronic	TRIP6	NA	NA	NA	intronic	ENSG00000087077	NA	NA	NA	NA	NA	7q22.1	NA	Name=HMGN3,Pol2	Name=3	NA	rs12705089	0.11	0.11	0.098	0.0910543	0.1899	0.0327	0.1052	0.0408	0.1074	0.2	0.03	0.12	0.04	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.316959	NA	NA	NA	NA	NA	0.116	NA	5.8101
1071	7	6370194	6370194	C	T	exonic	FAM220A	NA	nonsynonymous SNV	FAM220A:NM_001037163:exon2:c.G592A:p.V198M	exonic	ENSG00000178397	NA	nonsynonymous SNV	ENSG00000178397:ENST00000313324:exon2:c.G592A:p.V198M	NA	NA	7p22.1	NA	NA	NA	NA	rs6952125	0.7	0.7	0.702	0.732628	0.4553	0.8839	0.6614	0.8994	0.6871	0.46	0.88	0.63	0.89	0.5913	0.89	0.1	T	0.42	B	0.135	B	0.710	N	1.000	P	0.69	N	3.15	T	-1.069	T	0.000	T	0.043	1.636	11.43	-1.16	-0.596	-0.236	1.766	1.635657	1.635657	0.12	0.477674	0.844076	NA	0.717	NA	5.8090594
1071	12	95914758	95914758	T	C	intronic	USP44	NA	NA	NA	intronic	ENSG00000136014	NA	NA	NA	NA	NA	12q22	NA	Name=GATA-1	Name=4	NA	rs11108086	0.04	0.04	0.038	0.0363419	0.0706	0.0238	0.0317	0.0023	0.0634	0.07	0.02	0.03	0.0041	0.0523	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.791984	NA	NA	0.06814	0.01498	NA	0.022	NA	5.80896
1071	9	79321871	79321871	C	T	exonic	PRUNE2	NA	synonymous SNV	PRUNE2:NM_015225:exon8:c.G5319A:p.T1773T	exonic	ENSG00000106772	NA	synonymous SNV	ENSG00000106772:ENST00000376718:exon8:c.G5319A:p.T1773T,ENSG00000106772:ENST00000428286:exon8:c.G4242A:p.T1414T	NA	NA	9q21.2	NA	NA	NA	NA	rs577993	0.53	0.53	0.512	0.516374	0.6153	0.4464	0.6571	0.3722	0.5818	0.61	0.45	0.66	0.4	0.6033	0.66	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.939	T	0.000	T	.	-1.652	0.012	-3.5	-0.334	-0.645	1.431	-1.652482	NA	NA	0.639447	0.430804	NA	0.572	NA	5.8086196
1071	12	70954814	70954814	G	A	intronic	PTPRB	NA	NA	NA	intronic	ENSG00000127329	NA	NA	NA	NA	NA	12q15	NA	Name=JunD	Name=10	NA	rs12580379	0.15	0.15	0.162	0.171126	0.1918	0.131	0.1225	0.1165	0.2996	0.19	0.13	0.12	0.13	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.598533	NA	NA	NA	NA	NA	0.196	NA	5.8082
1071	9	135982088	135982088	A	C	exonic	RALGDS	NA	synonymous SNV	RALGDS:NM_001042368:exon8:c.T1296G:p.S432S,RALGDS:NM_001271774:exon8:c.T1374G:p.S458S,RALGDS:NM_001271775:exon8:c.T1458G:p.S486S,RALGDS:NM_001271776:exon8:c.T1425G:p.S475S,RALGDS:NM_006266:exon8:c.T1461G:p.S487S	exonic	ENSG00000160271	NA	synonymous SNV	ENSG00000160271:ENST00000424572:exon2:c.T141G:p.S47S,ENSG00000160271:ENST00000372047:exon8:c.T1425G:p.S475S,ENSG00000160271:ENST00000372050:exon8:c.T1461G:p.S487S,ENSG00000160271:ENST00000372062:exon8:c.T1374G:p.S458S,ENSG00000160271:ENST00000393157:exon8:c.T1458G:p.S486S,ENSG00000160271:ENST00000393160:exon8:c.T1296G:p.S432S,ENSG00000160271:ENST00000542690:exon13:c.T1674G:p.S558S	NA	NA	9q34.2	Score=790;Name=V$YY1_02	NA	NA	NA	rs2073822	0.23	0.23	0.198	0.194489	0.2962	0.1577	0.317	0.1422	0.1115	0.29	0.17	0.33	0.15	0.2604	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.762882	NA	NA	0.301885	0.170377	NA	0.196	NA	5.8081816
1071	9	33466859	33466859	C	T	intronic	NOL6	NA	NA	NA	intronic	ENSG00000165271	NA	NA	NA	NA	NA	9p13.3	NA	Name=CTCF_(SC-5916),c-Myc,CTCF_(C-20),SMC3_(ab9263),Znf143_(16618-1-AP),CTCF,Rad21	Name=90	NA	rs507758	0.09	0.09	0.089	0.0902556	0.0626	0.0218	0.0591	0.239	0.0102	0.05	0.03	0.07	0.22	0.0671	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.093519	NA	NA	0.062442	0.228552	NA	0.152	NA	5.807858
1071	3	52720080	52720080	A	C	UTR5	GNL3	NM_206825:c.-728A>C,NM_014366:c.-29A>C	NA	NA	UTR5	ENSG00000163938	ENST00000418458:c.-29A>C,ENST00000394799:c.-728A>C,ENST00000492349:c.-29A>C	NA	NA	NA	Name=Adiponectin levels	3p21.1	NA	Name=PAX5-C20,Oct-2,SIX5,Max,c-Myc,ELF1_(SC-631),HEY1,NFKB,TBP,IRF1,GTF2F1_(RAP-74),p300,USF-1,Nrf1,POU2F2,GABP,USF2,HMGN3,TAF1,Pol2(b),JunD,FOSL2,HA-E2F1,BRCA1_(C-1863),Sin3Ak-20,TAF7_(SQ-8),HDAC2_(SC-6296),ZNF263,Pol2-4H8,Pol2,RFX5_(N-494),Mxi1_(bHLH),SP1,NRSF,Pol2(phosphoS2)	Name=148	NA	rs1108842	0.55	0.55	0.573	0.490415	0.5209	0.4534	0.6066	0.5726	0.3037	0.53	0.51	0.64	0.57	0.4929	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.12565	NA	NA	0.511977	0.538357	NA	0.5	NA	5.8075564
1071	2	161025685	161025685	A	G	intronic	ITGB6	NA	NA	NA	intronic	ENSG00000115221	NA	NA	NA	NA	NA	2q24.2	Score=825;Name=V$GRE_C	NA	Name=6	NA	rs7608557	0.22	0.22	0.224	0.217053	0.0487	0.4296	0.0677	0.298	0.1677	0.05	0.47	0.06	0.31	0.1074	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.699961	1.699961	NA	0.036537	0.253179	NA	0.21	NA	5.807363
1071	7	150704250	150704250	C	G	exonic	NOS3	NA	synonymous SNV	NOS3:NM_000603:exon17:c.C1998G:p.A666A	exonic	ENSG00000164867	NA	synonymous SNV	ENSG00000164867:ENST00000461406:exon14:c.C1380G:p.A460A,ENSG00000164867:ENST00000297494:exon17:c.C1998G:p.A666A	Score=641;Name=lod=538	NA	7q36.1	NA	NA	NA	NA	rs2566514	0.42	0.42	0.382	0.43131	0.2694	0.3909	0.5043	0.5635	0.409	0.27	0.46	0.49	0.57	0.3414	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.362355	1.362355	NA	0.248605	0.498184	NA	0.428	NA	5.8072616
1071	11	123909342	123909342	G	A	exonic	OR10G7	NA	synonymous SNV	OR10G7:NM_001004463:exon1:c.C367T:p.L123L	exonic	ENSG00000182634	NA	synonymous SNV	ENSG00000182634:ENST00000330487:exon1:c.C367T:p.L123L	Score=514;Name=lod=163	NA	11q24.2	NA	NA	NA	NA	rs470242	0.24	0.24	0.143	0.23722	0.2853	0.3264	0.2983	0.0363	0.3241	0.3	0.3	0.25	0.05	0.2863	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.30052	NA	NA	0.287858	0.082273	NA	0.268	NA	5.8072086
1071	19	52327784	52327784	C	T	exonic	FPR3	NA	synonymous SNV	FPR3:NM_002030:exon2:c.C783T:p.G261G	exonic	ENSG00000187474	NA	synonymous SNV	ENSG00000187474:ENST00000339223:exon2:c.C783T:p.G261G,ENSG00000187474:ENST00000595991:exon2:c.C783T:p.G261G	NA	NA	19q13.41	NA	NA	Name=2	NA	rs3752125	0.24	0.24	0.214	0.226637	0.2763	0.2649	0.2997	0.0998	0.2556	0.27	0.28	0.31	0.12	0.277	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.195725	NA	NA	0.306744	0.130958	NA	0.232	NA	5.8066226
1071	17	81006387	81006387	G	A	exonic	B3GNTL1	NA	synonymous SNV	B3GNTL1:NM_001009905:exon3:c.C237T:p.H79H	exonic	ENSG00000175711	NA	synonymous SNV	ENSG00000175711:ENST00000320865:exon3:c.C237T:p.H79H	NA	NA	17q25.3	NA	Name=Pol2,TCF4,eGFP-JunD,USF2,Max,c-Fos,JunD,USF-1,eGFP-FOS	NA	NA	rs1143006	0.3	0.3	0.299	0.285543	0.2962	0.3661	0.2709	0.2542	0.2444	0.28	0.39	0.28	0.24	0.2883	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.894406	NA	NA	0.275581	0.245801	NA	0.283	NA	5.8065856
1071	2	128079806	128079806	A	G	exonic	MAP3K2	NA	synonymous SNV	MAP3K2:NM_006609:exon11:c.T861C:p.A287A	exonic	ENSG00000169967	NA	synonymous SNV	ENSG00000169967:ENST00000344908:exon11:c.T861C:p.A287A,ENSG00000169967:ENST00000409947:exon12:c.T861C:p.A287A	Score=542;Name=lod=213	NA	2q14.3	NA	NA	NA	NA	rs3732209	0.19	0.19	0.195	0.20647	0.2803	0.0179	0.1729	0.2663	0.2679	0.27	0.02	0.18	0.27	0.2661	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.509608	1.509608	NA	0.313868	0.256742	NA	0.362	NA	5.8063986
1071	11	8705480	8705480	T	C	intronic	RPL27A	NA	NA	NA	UTR3	ENSG00000166441	ENST00000534599:c.*12T>C	NA	NA	NA	NA	11p15.4	NA	Name=ELF1_(SC-631)	Name=40	NA	rs7951084	0.19	0.19	0.122	0.190096	0.1779	0.2808	0.1715	0.112	0.228	0.19	0.26	0.21	0.11	0.1824	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.095046	NA	NA	NA	NA	NA	0.188	NA	5.8063667
1071	8	29886373	29886373	G	A	intergenic	MIR3148,MIR548O2	dist=71509;dist=33885	NA	NA	ncRNA_exonic	ENSG00000254013	NA	NA	NA	Score=535;Name=lod=199	NA	8p12	NA	NA	Name=17	NA	rs10105971	0.24	0.24	0.248	0.238818	0.1938	0.2976	0.1441	0.3336	0.1636	0.2	0.3	0.13	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.917133	NA	NA	NA	NA	ID=COSN168306;OCCURENCE=1(large_intestine)	0.181	NA	5.8062
1071	1	42880516	42880516	T	C	exonic	RIMKLA	NA	synonymous SNV	RIMKLA:NM_173642:exon5:c.T1047C:p.S349S	exonic	ENSG00000177181	NA	synonymous SNV	ENSG00000177181:ENST00000431473:exon5:c.T1047C:p.S349S	Score=534;Name=lod=197	NA	1p34.2	Score=804;Name=V$ISRE_01	NA	NA	NA	rs1055055	0.52	0.52	0.532	0.489417	0.6441	0.3433	0.5173	0.5197	0.4202	0.64	0.37	0.57	0.48	0.58	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.498279	NA	NA	0.636512	0.536541	ID=COSM146486;OCCURENCE=1(stomach)	0.529	NA	5.8060546
1071	1	179520506	179520506	G	A	exonic	NPHS2	NA	synonymous SNV	NPHS2:NM_014625:exon8:c.C954T:p.A318A	exonic	ENSG00000116218	NA	synonymous SNV	ENSG00000116218:ENST00000367616:exon7:c.C750T:p.A250A,ENSG00000116218:ENST00000367615:exon8:c.C954T:p.A318A	NA	NA	1q25.2	NA	Name=eGFP-JunD,c-Fos,EBF,PAX5-C20,AP-2gamma	Name=94	NA	rs1410592	0.57	0.57	0.551	0.58766	0.6153	0.4911	0.634	0.5946	0.6166	0.6	0.52	0.68	0.52	0.6192	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.790284	NA	NA	0.626163	0.599637	ID=COSM146700;OCCURENCE=1(stomach)	0.63	NA	5.8060036
1071	22	46652959	46652959	A	G	exonic	PKDREJ	NA	synonymous SNV	PKDREJ:NM_006071:exon1:c.T6261C:p.P2087P	exonic	ENSG00000130943	NA	synonymous SNV	ENSG00000130943:ENST00000253255:exon1:c.T6261C:p.P2087P	NA	NA	22q13.31	Score=845;Name=V$HAND1E47_01	NA	NA	NA	rs4508712	0.35	0.35	0.382	0.370407	0.2893	0.0516	0.2147	0.9244	0.1442	0.28	0.04	0.23	0.91	0.2836	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.959664	NA	NA	0.287907	0.833636	NA	0.5	NA	5.8058596
1071	3	97806616	97806616	G	A	exonic	OR5AC2	NA	nonsynonymous SNV	OR5AC2:NM_054106:exon1:c.G600A:p.M200I	exonic	ENSG00000196578	NA	nonsynonymous SNV	ENSG00000196578:ENST00000358642:exon1:c.G600A:p.M200I	NA	NA	3q11.2	NA	NA	NA	NA	rs4518168	0.51	0.51	0.502	0.523363	0.505	0.4454	0.5461	0.5416	0.5818	0.51	0.44	0.53	0.56	0.5099	0.56	0.18	T	0.0	B	0.01	B	0.166	N	1.000	P	0.925	L	1.27	T	-0.913	T	0.000	T	0.081	0.744	7.949	1.48	0.107	0.308	3.429	0.744366	NA	0.31	0.512677	0.523831	NA	0.449	NA	5.8057564
1071	17	48549791	48549791	C	G	exonic	ACSF2	NA	synonymous SNV	ACSF2:NM_025149:exon12:c.C1326G:p.A442A	exonic	ENSG00000167107	NA	synonymous SNV	ENSG00000167107:ENST00000541920:exon10:c.C846G:p.A282A,ENSG00000167107:ENST00000504392:exon11:c.C1197G:p.A399A,ENSG00000167107:ENST00000300441:exon12:c.C1326G:p.A442A,ENSG00000167107:ENST00000502667:exon12:c.C1287G:p.A429A,ENSG00000167107:ENST00000427954:exon13:c.C1401G:p.A467A	Score=412;Name=lod=63	NA	17q21.33	NA	NA	NA	NA	rs2305998	0.22	0.22	0.198	0.185703	0.2992	0.1409	0.2493	0.0855	0.2055	0.29	0.15	0.31	0.13	0.2584	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.762433	NA	NA	0.303372	0.128915	NA	0.116	NA	5.8056946
1071	1	21952590	21952590	G	A	intronic	RAP1GAP	NA	NA	NA	intronic	ENSG00000076864	NA	NA	NA	NA	NA	1p36.12	NA	Name=GATA-2	Name=2	NA	rs10917025	0.27	0.27	0.233	0.265176	0.1948	0.4851	0.3415	0.0356	0.3671	0.21	0.49	0.34	0.05	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.031515	NA	NA	NA	NA	NA	0.159	NA	5.8052
1071	1	146523957	146523957	T	C	intergenic	LOC728989,PRKAB2	dist=9358;dist=102728	NA	NA	ncRNA_exonic	ENSG00000225603	NA	NA	NA	Score=736;Name=lod=1309	NA	1q21.1	NA	Name=PU.1	NA	NA	rs61734778	0.31	0.31	0.279	0.348043	0.1948	0.4395	0.3545	0.3222	0.4417	0.2	0.44	0.32	0.31	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.004639	NA	NA	NA	NA	NA	0.217	NA	5.8052
1072	10	129861497	129861497	G	A	intronic	PTPRE	NA	NA	NA	intronic	ENSG00000132334	NA	NA	NA	NA	NA	10q26.2	NA	Name=SP1,PU.1,BCL11A,IRF4_(M-17),NFKB,PAX5-N19,TCF12,EBF,Egr-1,GATA-2	Name=40	NA	rs56204987	0.09	0.09	0.088	0.0850639	0.0964	0.001	0.0692	0.1982	0.0184	0.09	0.0017	0.07	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.536521	NA	NA	0.09868	0.17341	NA	0.065	NA	5.80492
1072	11	10786175	10786175	C	T	exonic	CTR9	NA	synonymous SNV	CTR9:NM_014633:exon12:c.C1494T:p.T498T	exonic	ENSG00000198730	NA	synonymous SNV	ENSG00000198730:ENST00000361367:exon12:c.C1494T:p.T498T	Score=333;Name=lod=30	NA	11p15.3	NA	NA	NA	NA	rs7118399	0.22	0.22	0.208	0.199081	0.3052	0.2133	0.1542	0.1112	0.226	0.32	0.18	0.19	0.12	0.2518	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.780966	NA	NA	0.305776	0.139255	ID=COSM147144;OCCURENCE=1(stomach)	0.283	NA	5.8038906
1072	1	26508293	26508293	G	A	intronic	CNKSR1	NA	NA	NA	intronic	ENSG00000142675	NA	NA	NA	NA	NA	1p36.11	NA	Name=STAT3	Name=34	NA	rs3819033	0.26	0.26	0.216	0.285942	0.1004	0.5933	0.4063	0.0053	0.454	0.1	0.61	0.36	0.01	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.851941	NA	NA	0.095852	0.03396	NA	0.196	NA	5.803748
1072	20	16493533	16493533	T	C	exonic	KIF16B	NA	synonymous SNV	KIF16B:NM_001199865:exon5:c.A384G:p.G128G,KIF16B:NM_001199866:exon5:c.A384G:p.G128G,KIF16B:NM_024704:exon5:c.A384G:p.G128G	exonic	ENSG00000089177	NA	synonymous SNV	ENSG00000089177:ENST00000354981:exon5:c.A384G:p.G128G,ENSG00000089177:ENST00000355755:exon5:c.A384G:p.G128G,ENSG00000089177:ENST00000408042:exon5:c.A384G:p.G128G	NA	NA	20p12.1	NA	NA	Name=2	NA	rs6135775	0.25	0.25	0.234	0.241214	0.2843	0.38	0.2839	0.0582	0.271	0.28	0.36	0.28	0.05	0.2721	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.124568	NA	NA	0.307209	0.104176	NA	0.188	NA	5.8030576
1072	5	50057729	50057729	G	A	exonic	PARP8	NA	synonymous SNV	PARP8:NM_001178056:exon6:c.G420A:p.G140G,PARP8:NM_024615:exon6:c.G420A:p.G140G,PARP8:NM_001178055:exon7:c.G420A:p.G140G	exonic	ENSG00000151883	NA	synonymous SNV	ENSG00000151883:ENST00000281631:exon6:c.G420A:p.G140G,ENSG00000151883:ENST00000505554:exon6:c.G357A:p.G119G,ENSG00000151883:ENST00000514067:exon6:c.G420A:p.G140G,ENSG00000151883:ENST00000515166:exon6:c.G420A:p.G140G,ENSG00000151883:ENST00000503750:exon7:c.G420A:p.G140G,ENSG00000151883:ENST00000505697:exon7:c.G420A:p.G140G	Score=598;Name=lod=359	NA	5q11.1	Score=825;Name=V$BRN2_01	NA	NA	NA	rs282547	0.57	0.57	0.528	0.467851	0.6272	0.6687	0.5778	0.1619	0.4325	0.66	0.74	0.62	0.18	0.5754	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.601468	NA	NA	0.661395	0.253291	NA	0.493	NA	5.8026716
1072	4	54966667	54966667	C	T	exonic	GSX2	NA	synonymous SNV	GSX2:NM_133267:exon1:c.C156T:p.S52S	exonic	ENSG00000180613	NA	synonymous SNV	ENSG00000180613:ENST00000326902:exon1:c.C156T:p.S52S,ENSG00000180613:ENST00000503800:exon1:c.C156T:p.S52S	Score=619;Name=lod=439	NA	4q12	NA	Name=SUZ12	NA	NA	rs3194383	0.62	0.62	0.548	0.60024	0.6143	0.8423	0.7219	0.2859	0.6748	0.61	0.83	0.69	0.33	0.634	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.239479	1.239479	NA	0.615725	0.335984	NA	0.29	NA	5.8026416
1072	3	97664725	97664725	C	T	exonic	MINA	NA	nonsynonymous SNV	MINA:NM_001042533:exon9:c.G1156A:p.A386T,MINA:NM_001261829:exon9:c.G1153A:p.A385T,MINA:NM_032778:exon9:c.G1153A:p.A385T,MINA:NM_153182:exon9:c.G1156A:p.A386T	exonic	ENSG00000170854	NA	nonsynonymous SNV	ENSG00000170854:ENST00000333396:exon9:c.G1156A:p.A386T,ENSG00000170854:ENST00000360258:exon9:c.G1153A:p.A385T,ENSG00000170854:ENST00000394198:exon9:c.G1156A:p.A386T	NA	NA	3q11.2	NA	NA	NA	NA	rs2172257	0.51	0.51	0.496	0.478035	0.5119	0.6746	0.5101	0.2648	0.5061	0.52	0.71	0.46	0.29	0.5041	0.71	0.65	T	0.004	B	0.01	B	0.162	N	1.000	P	0.235	N	2.71	T	-1.027	T	0.000	T	0.076	0.946	8.856	1.6	0.311	-0.512	5.47	0.945657	NA	0.43	0.514771	0.291194	ID=COSM447109;OCCURENCE=1(breast)	0.449	NA	5.8025624
1072	4	187629497	187629497	G	A	exonic	FAT1	NA	synonymous SNV	FAT1:NM_005245:exon2:c.C1485T:p.N495N	exonic	ENSG00000083857	NA	synonymous SNV	ENSG00000083857:ENST00000441802:exon2:c.C1485T:p.N495N	Score=397;Name=lod=55	NA	4q35.2	Score=877;Name=V$GATA1_03	NA	NA	NA	rs458021	0.45	0.45	0.434	0.421925	0.6461	0.2242	0.5692	0.2859	0.4744	0.65	0.22	0.59	0.31	0.5644	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.463596	NA	NA	0.653726	0.374022	NA	0.399	NA	5.8024406
1072	5	169435713	169435713	A	C	exonic	DOCK2	NA	synonymous SNV	DOCK2:NM_004946:exon32:c.A3195C:p.L1065L	exonic	ENSG00000134516	NA	synonymous SNV	ENSG00000134516:ENST00000520908:exon18:c.A1671C:p.L557L,ENSG00000134516:ENST00000540750:exon18:c.A378C:p.L126L,ENSG00000134516:ENST00000256935:exon32:c.A3195C:p.L1065L	Score=598;Name=lod=359	NA	5q35.1	NA	NA	NA	NA	rs2287727	0.25	0.25	0.217	0.243011	0.2783	0.3909	0.3026	0.0257	0.3057	0.28	0.37	0.31	0.03	0.2919	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.185421	NA	NA	0.294535	0.076714	NA	0.261	NA	5.8019316
1072	11	89391889	89391889	A	G	upstream	FOLH1B	NA	NA	NA	ncRNA_exonic	ENSG00000134612	NA	NA	NA	Score=591;Name=lod=337	NA	11q14.3	Score=906;Name=V$GATA1_04	NA	NA	NA	rs2851529	0.2	0.2	0.114	0.217053	0.3648	0.1359	0.2277	0.1346	0.2526	0.3	0.09	0.26	0.11	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.213321	2.213321	NA	NA	NA	NA	0.297	NA	5.8018666
1072	6	31106893	31106893	A	G	UTR5	PSORS1C2	NM_014069:c.-90T>C	NA	NA	UTR5	ENSG00000204538	ENST00000259845:c.-90T>C	NA	NA	NA	NA	6p21.33	NA	Name=CTCF	Name=5	NA	rs1265094	0.49	0.49	0.473	0.477636	0.5318	0.3502	0.4438	0.562	0.4632	0.53	0.37	0.46	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.045243	NA	NA	NA	NA	NA	0.543	NA	5.8015334
1072	16	2115506	2115506	C	T	intronic	TSC2	NA	NA	NA	intronic	ENSG00000103197	NA	NA	NA	NA	NA	16p13.3	NA	NA	Name=19	NA	rs45517185	0.04	0.04	0.029	0.034345	0.0726	NA	0.0461	0.0023	0.0654	0.07	NA	0.07	0.0041	0.0566	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.770831	NA	NA	0.069419	0.015241	NA	0.022	CLINSIG=untested|untested|untested|non-pathogenic;CLNDBN=Tuberous_sclerosis_syndrome|Lymphangiomyomatosis|Tuberous_sclerosis_syndrome|not_provided;CLNREVSTAT=not|not|not|single;CLNACC=RCV000043407.2|RCV000055598.1|RCV000055598.1|RCV000125653.1;CLNDSDB=GeneReviews:MedGen:OMIM:SNOMED_CT|MedGen:OMIM:Orphanet:SNOMED_CT|GeneReviews:MedGen:OMIM:SNOMED_CT|.;CLNDSDBID=NBK1220:C0041341:191100:7199000|C0751674:606690:ORPHA538:73017001|NBK1220:C0041341:191100:7199000|.	5.801381
1072	6	29856022	29856022	G	A	ncRNA_intronic	HLA-H	NA	NA	NA	ncRNA_exonic	ENSG00000230521	NA	NA	NA	NA	NA	6p22.1	NA	Name=NFKB,Pol2,Pol2-4H8	Name=64	NA	rs1611611	0.45	0.45	0.35	0.419129	0.4781	0.4613	0.5173	0.3593	0.3262	0.48	0.45	0.44	0.39	0.3872	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.384887	NA	NA	NA	NA	NA	0.116	NA	5.8013666
1072	9	86281195	86281195	A	G	intronic	UBQLN1	NA	NA	NA	intronic	ENSG00000135018	NA	NA	NA	Score=381;Name=lod=47	NA	9q21.32	NA	NA	Name=4	NA	rs12344615	0.15	0.15	0.142	0.167133	0.1988	0.002	0.1326	0.2542	0.2117	0.19	0.0017	0.14	0.26	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.490254	NA	NA	NA	NA	NA	0.159	NA	5.8012
1072	11	130779803	130779803	C	T	intronic	SNX19	NA	NA	NA	intronic	ENSG00000120451	NA	NA	NA	NA	NA	11q24.3	NA	Name=STAT3,c-Fos,c-Jun	Name=101	NA	rs1559671	0.15	0.15	0.142	0.129593	0.1988	0.1637	0.0893	0.0492	0.1605	0.2	0.19	0.1	0.05	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.759846	NA	NA	NA	NA	NA	0.217	NA	5.8012
1072	12	95656936	95656936	A	G	intronic	VEZT	NA	NA	NA	intronic	ENSG00000028203	NA	NA	NA	NA	NA	12q22	Score=890;Name=V$SRY_02	Name=GATA-2	NA	NA	rs12305760	0.28	0.28	0.296	0.321086	0.1988	0.2252	0.255	0.525	0.317	0.19	0.23	0.26	0.49	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.424667	NA	NA	NA	NA	NA	0.362	NA	5.8012
1072	11	123065683	123065683	C	T	UTR5	CLMP	NM_024769:c.-35G>A	NA	NA	ncRNA_UTR5	ENSG00000166250	NA	NA	NA	Score=300;Name=lod=22	NA	11q24.1	NA	Name=E2F6,Pol2,TAF1,AP-2gamma,HA-E2F1,E2F1,NANOG_(SC-33759),AP-2alpha	Name=69	NA	rs2302605	0.5	0.5	0.457	0.482228	0.5924	0.5933	0.6571	0.1029	0.6431	0.59	0.62	0.62	0.12	0.5551	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.865386	NA	NA	0.55164	0.194432	NA	0.348	NA	5.80086
1072	6	4998963	4998963	A	G	exonic	RPP40	NA	synonymous SNV	RPP40:NM_006638:exon5:c.T546C:p.A182A	exonic	ENSG00000124787	NA	synonymous SNV	ENSG00000124787:ENST00000319533:exon4:c.T477C:p.A159A,ENSG00000124787:ENST00000380051:exon5:c.T546C:p.A182A,ENSG00000124787:ENST00000464646:exon5:c.T366C:p.A122A	Score=497;Name=lod=139	NA	6p25.1	NA	NA	NA	NA	rs1749144	0.31	0.31	0.298	0.342252	0.2773	0.1677	0.3156	0.5242	0.362	0.27	0.16	0.34	0.53	0.3242	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.232916	NA	NA	0.26461	0.476898	NA	0.428	NA	5.8005566
1072	9	34622389	34622389	A	C	exonic	ARID3C	NA	nonsynonymous SNV	ARID3C:NM_001017363:exon5:c.T1003G:p.C335G	exonic	ENSG00000205143	NA	nonsynonymous SNV	ENSG00000205143:ENST00000378909:exon5:c.T1003G:p.C335G	NA	NA	9p13.3	NA	NA	NA	NA	rs3808869	0.56	0.56	0.542	0.602436	0.4692	0.4802	0.598	0.7723	0.6391	0.48	0.51	0.57	0.75	0.5532	0.75	0.74	T	0.0	B	0.0	B	0.079	N	1.000	P	-1.39	N	1.14	T	-1.008	T	0.000	T	0.024	-1.414	0.022	0.293	-0.044	-0.178	4.092	-1.413812	NA	0.69	0.511395	0.726963	NA	0.551	NA	5.7995384
1072	12	120907147	120907147	G	A	intronic	SRSF9	NA	NA	NA	intronic	ENSG00000111786	NA	NA	NA	NA	NA	12q24.31	NA	Name=PU.1,CTCFL_(SC-98982),CTCF,Egr-1,ZBTB7A_(SC-34508),CTCF_(C-20)	Name=71	NA	rs61945873	0.18	0.18	0.13	0.209465	0.2008	0.1587	0.1657	0.2799	0.2065	0.19	0.15	0.17	0.23	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.433767	1.433767	NA	NA	NA	NA	NA	NA	5.7992
1072	17	44344926	44344926	A	G	intergenic	KANSL1,LRRC37A	dist=42186;dist=27571	NA	NA	ncRNA_intronic	ENSG00000261575	NA	NA	NA	NA	NA	17q21.31	NA	Name=ZEB1_(SC-25388),ZNF263	Name=148	NA	rs74652075	0.1	0.1	0.103	0.0734824	0.2008	0.001	0.1412	0.0113	0.0532	0.19	0.0017	0.16	0.02	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.449691	NA	NA	NA	NA	NA	0.051	NA	5.7992
1072	17	44344970	44344970	T	C	intergenic	KANSL1,LRRC37A	dist=42230;dist=27527	NA	NA	ncRNA_intronic	ENSG00000261575	NA	NA	NA	NA	NA	17q21.31	NA	Name=ZEB1_(SC-25388),FOXA1_(C-20)	Name=148	NA	rs77568881	0.1	0.1	0.096	0.0734824	0.2008	0.001	0.1412	0.0113	0.0532	0.19	0.0017	0.16	0.02	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.272614	NA	NA	NA	NA	NA	0.043	NA	5.7992
1072	7	92099310	92099310	A	G	intergenic	GATAD1,PEX1	dist=9929;dist=17027	NA	NA	exonic	ENSG00000242950	NA	nonsynonymous SNV	ENSG00000242950:ENST00000493463:exon1:c.T386C:p.V129A,ENSG00000242950:ENST00000603053:exon2:c.T386C:p.V129A	NA	NA	7q21.2	NA	NA	NA	NA	rs142852059	0.01	0.01	0.003	0.00499201	0.0159	NA	0.0086	0.0008	0.002	0.01	NA	0.02	0.002	0.0074	0.02	0.03	D	.	.	.	.	.	.	1.000	N	1.625	L	2.24	T	-1.026	T	0.024	T	0.062	0.99	9.041	0.046	0.115	0.164	.	0.989648	NA	NA	0.011512	0.001589	NA	0.014	NA	5.7985214
1072	2	183935867	183935867	G	A	intergenic	NCKAP1,DUSP19	dist=32638;dist=7420	NA	NA	ncRNA_exonic	ENSG00000231203	NA	NA	NA	Score=507;Name=lod=153	NA	2q32.1	NA	Name=CtBP2,NANOG_(SC-33759),CTCF	NA	NA	rs2952345	0.2	0.2	0.192	0.210064	0.2018	0.0903	0.1124	0.388	0.1708	0.2	0.08	0.14	0.37	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.071815	NA	NA	NA	NA	NA	0.196	NA	5.7982
1072	8	120429282	120429282	G	T	intronic	NOV	NA	NA	NA	intronic	ENSG00000136999	NA	NA	NA	NA	NA	8q24.12	NA	Name=AP-2gamma,CTCF_(C-20),CTCF_(SC-5916),RFX5_(N-494),ZNF263,AP-2alpha,CTCF,Rad21,SMC3_(ab9263),TAF1	Name=125	NA	rs7834596	0.17	0.17	0.17	0.177316	0.2018	0.006	0.1599	0.2874	0.1922	0.19	0.0035	0.2	0.32	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.841435	NA	NA	NA	NA	NA	0.152	NA	5.7982
1072	2	113890304	113890304	T	C	exonic	IL1RN	NA	synonymous SNV	IL1RN:NM_173842:exon4:c.T390C:p.S130S,IL1RN:NM_000577:exon5:c.T336C:p.S112S,IL1RN:NM_173841:exon6:c.T399C:p.S133S,IL1RN:NM_173843:exon6:c.T288C:p.S96S	exonic	ENSG00000136689	NA	synonymous SNV	ENSG00000136689:ENST00000409930:exon4:c.T390C:p.S130S,ENSG00000136689:ENST00000354115:exon5:c.T336C:p.S112S,ENSG00000136689:ENST00000259206:exon6:c.T399C:p.S133S,ENSG00000136689:ENST00000361779:exon6:c.T288C:p.S96S,ENSG00000136689:ENST00000409052:exon8:c.T288C:p.S96S	NA	NA	2q13	Score=847;Name=V$ZID_01	NA	NA	NA	rs315952	0.39	0.39	0.378	0.35004	0.2803	0.5556	0.2147	0.466	0.1493	0.3	0.58	0.2	0.46	0.3082	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.131241	NA	NA	0.280465	0.435996	NA	0.355	NA	5.7977016
1072	12	104515108	104515108	G	A	intronic	NFYB	NA	NA	NA	intronic	ENSG00000120837	NA	NA	NA	NA	NA	12q23.3	NA	Name=c-Fos	Name=104	NA	rs115044997	0.05	0.05	0.031	0.0399361	0.0825	0.001	0.0504	0.025	0.0491	0.08	NA	0.06	0.03	0.057	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.315054	2.315054	NA	0.06314	0.031775	ID=COSM328316;OCCURENCE=1(pancreas)	0.007	NA	5.79736
1072	5	179043041	179043041	C	G	intronic	HNRNPH1	NA	NA	NA	intronic	ENSG00000169045	NA	NA	NA	NA	NA	5q35.3	NA	Name=Pol2(b)	Name=5	NA	rs4256313	0.33	0.33	0.318	0.339058	0.2028	0.6518	0.3833	0.1392	0.3957	0.2	0.67	0.37	0.11	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.288484	NA	NA	NA	NA	NA	0.152	NA	5.7972
1072	6	31323468	31323468	G	T	intronic	HLA-B	NA	NA	NA	intronic	ENSG00000234745	NA	NA	NA	NA	NA	6p21.33	NA	Name=USF-1,Pol2,Pol2-4H8	Name=3	NA	rs3897530	0.26	0.26	0.248	0.288738	0.2028	0.1994	0.2795	0.3971	0.3292	0.19	0.24	0.3	0.36	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.550745	NA	NA	NA	NA	NA	0.181	NA	5.7972
1072	15	64508763	64508763	G	A	exonic	CSNK1G1	NA	synonymous SNV	CSNK1G1:NM_022048:exon5:c.C442T:p.L148L	exonic	ENSG00000169118,ENSG00000259316	NA	synonymous SNV	ENSG00000169118:ENST00000606225:exon4:c.C442T:p.L148L,ENSG00000169118:ENST00000303032:exon5:c.C442T:p.L148L,ENSG00000169118:ENST00000303052:exon5:c.C442T:p.L148L,ENSG00000259316:ENST00000561349:exon5:c.C310T:p.L104L,ENSG00000169118:ENST00000607537:exon5:c.C442T:p.L148L,ENSG00000259316:ENST00000606793:exon7:c.C361T:p.L121L	Score=532;Name=lod=194	NA	15q22.31	NA	NA	NA	NA	rs6494466	0.38	0.38	0.431	0.485423	0.2386	0.1419	0.2089	0.9614	0.6462	0.23	0.16	0.25	0.95	0.3625	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.031046	2.031046	NA	0.268372	0.839991	NA	0.493	NA	5.7971946
1072	15	86124419	86124419	C	T	exonic	AKAP13	NA	synonymous SNV	AKAP13:NM_006738:exon7:c.C3120T:p.S1040S,AKAP13:NM_007200:exon7:c.C3120T:p.S1040S	exonic	ENSG00000170776	NA	synonymous SNV	ENSG00000170776:ENST00000361243:exon7:c.C3120T:p.S1040S,ENSG00000170776:ENST00000394518:exon7:c.C3120T:p.S1040S,ENSG00000170776:ENST00000559362:exon7:c.C3120T:p.S1040S	NA	NA	15q25.3	NA	Name=EBF1_(C-8),ELF1_(SC-631),Pol2	Name=38	NA	rs4843073	0.58	0.58	0.597	0.58147	0.6153	0.5784	0.6153	0.5461	0.5736	0.61	0.58	0.61	0.53	0.6103	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.12984	NA	NA	0.644103	0.591508	NA	0.572	NA	5.7969636
1072	14	24839165	24839165	C	T	exonic	NFATC4	NA	synonymous SNV	NFATC4:NM_001198965:exon2:c.C561T:p.D187D,NFATC4:NM_001198966:exon2:c.C351T:p.D117D,NFATC4:NM_004554:exon2:c.C561T:p.D187D,NFATC4:NM_001136022:exon3:c.C750T:p.D250D,NFATC4:NM_001198967:exon3:c.C750T:p.D250D	exonic	ENSG00000100968	NA	synonymous SNV	ENSG00000100968:ENST00000554344:exon1:c.C351T:p.D117D,ENSG00000100968:ENST00000554661:exon1:c.C351T:p.D117D,ENSG00000100968:ENST00000557451:exon1:c.C351T:p.D117D,ENSG00000100968:ENST00000250373:exon2:c.C561T:p.D187D,ENSG00000100968:ENST00000422617:exon2:c.C525T:p.D175D,ENSG00000100968:ENST00000553708:exon2:c.C561T:p.D187D,ENSG00000100968:ENST00000553879:exon2:c.C351T:p.D117D,ENSG00000100968:ENST00000554050:exon2:c.C561T:p.D187D,ENSG00000100968:ENST00000555453:exon2:c.C525T:p.D175D,ENSG00000100968:ENST00000556169:exon2:c.C525T:p.D175D,ENSG00000100968:ENST00000557674:exon2:c.C492T:p.D164D,ENSG00000100968:ENST00000413692:exon3:c.C750T:p.D250D,ENSG00000100968:ENST00000424781:exon3:c.C600T:p.D200D,ENSG00000100968:ENST00000539237:exon3:c.C657T:p.D219D,ENSG00000100968:ENST00000553469:exon3:c.C657T:p.D219D,ENSG00000100968:ENST00000554591:exon3:c.C750T:p.D250D,ENSG00000100968:ENST00000554966:exon3:c.C600T:p.D200D,ENSG00000100968:ENST00000555590:exon3:c.C600T:p.D200D,ENSG00000100968:ENST00000556279:exon3:c.C657T:p.D219D	Score=378;Name=lod=46	NA	14q12	NA	NA	NA	NA	rs2228233	0.38	0.38	0.361	0.40016	0.2644	0.4692	0.4323	0.3986	0.4479	0.28	0.47	0.4	0.4	0.3402	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.373895	NA	NA	0.26523	0.355591	NA	0.283	NA	5.7968366
1072	6	158517308	158517308	A	G	exonic	SYNJ2	NA	nonsynonymous SNV	SYNJ2:NM_001178088:exon26:c.A3692G:p.E1231G,SYNJ2:NM_003898:exon27:c.A4403G:p.E1468G	exonic	ENSG00000078269	NA	nonsynonymous SNV	ENSG00000078269:ENST00000367112:exon10:c.A1658G:p.E553G,ENSG00000078269:ENST00000367122:exon26:c.A4268G:p.E1423G,ENSG00000078269:ENST00000355585:exon27:c.A4403G:p.E1468G	NA	NA	6q25.3	NA	NA	NA	NA	rs2502601	0.53	0.53	0.535	0.547324	0.5119	0.5694	0.3573	0.612	0.6084	0.52	0.53	0.38	0.63	0.5155	0.63	0.67	T	0.0	B	0.0	B	0.466	N	1.000	P	-0.345	N	1.03	T	-0.826	T	0.218	T	0.025	0.934	8.806	0.080	-0.029	-0.017	5.045	0.934158	NA	0.88	0.509186	0.581707	ID=COSM1441854;OCCURENCE=1(large_intestine)	0.543	NA	5.7967474
1072	1	205779231	205779231	G	A	exonic	SLC41A1	NA	synonymous SNV	SLC41A1:NM_173854:exon2:c.C339T:p.T113T	exonic	ENSG00000133065	NA	synonymous SNV	ENSG00000133065:ENST00000367137:exon2:c.C339T:p.T113T	NA	NA	1q32.1	NA	Name=MafK_(ab50322),MafF_(M8194)	NA	NA	rs11240569	0.27	0.27	0.253	0.276558	0.2883	0.5198	0.1873	0.0174	0.4274	0.29	0.52	0.17	0.03	0.2949	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.670122	NA	NA	0.286744	0.06355	ID=COSM146744;OCCURENCE=1(stomach)	0.196	NA	5.7967226
1072	8	70855209	70855209	C	T	intergenic	SLCO5A1,PRDM14	dist=107910;dist=108677	NA	NA	ncRNA_exonic	ENSG00000247570	NA	NA	NA	Score=469;Name=lod=107	NA	8q13.3	NA	Name=HA-E2F1	NA	NA	rs17435904	0.16	0.16	0.163	0.173123	0.2038	0.0962	0.219	0.112	0.271	0.18	0.13	0.21	0.13	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.807597	NA	NA	NA	NA	NA	0.181	NA	5.7962
1072	20	10330136	10330136	G	A	intergenic	SNAP25,MKKS	dist=42070;dist=55292	NA	NA	ncRNA_exonic	ENSG00000214835	NA	NA	NA	Score=687;Name=lod=828	NA	20p12.2	NA	Name=TCF4	NA	NA	rs6131078	0.18	0.18	0.182	0.201478	0.2038	0.1915	0.1657	0.1528	0.3006	0.2	0.2	0.17	0.15	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.003123	NA	NA	NA	NA	NA	0.181	NA	5.7962
1072	21	38593620	38593620	G	T	ncRNA_exonic	DSCR9	NA	NA	NA	ncRNA_exonic	ENSG00000230366	NA	NA	NA	NA	NA	21q22.13	NA	Name=ZNF263,Pol2-4H8,c-Fos,HA-E2F1,Sin3Ak-20,STAT3,YY1,Pol2(b),JunD,FOSL2,IRF1,TBP,TCF12,USF-1,SETDB1,CTCF_(C-20),PAX5-N19,HEY1,BCL3,NFKB,CCNT2,c-Myc,eGFP-JunD,IRF4_(M-17),E2F6,USF1_(SC-8983),YY1_(C-20),SMC3_(ab9263),Pol2,ATF3,SP1,GABP,USF2,POU2F2,Znf143_(16618-1-AP),TAF1,E2F6_(H-50),GTF2F1_(RAP-74),BHLHE40,CTCF,Oct-2,Rad21,ELF1_(SC-631),Max,STAT1	Name=147	NA	rs13864	0.28	0.28	0.279	0.286142	0.2883	0.256	0.2161	0.3321	0.3027	0.3	0.24	0.21	0.35	0.2885	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.342451	NA	NA	0.293974	0.312755	NA	0.196	NA	5.7958926
1073	X	295231	295231	A	G	exonic	PPP2R3B	NA	synonymous SNV	PPP2R3B:NM_013239:exon13:c.T1599C:p.P533P	exonic	ENSG00000167393	NA	synonymous SNV	ENSG00000167393:ENST00000390665:exon13:c.T1599C:p.P533P	Score=309;Name=lod=24	NA	Xp22.33	NA	NA	NA	NA	rs1133523	0.53	0.53	0.52941	NA	NA	NA	NA	NA	NA	0.42	0.51	0.43	0.81	0.459	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4231	NA	NA	0.412982	0.777905	NA	0.428	NA	5.7946846
1073	1	55167773	55167773	T	A	exonic	MROH7	NA	nonsynonymous SNV	MROH7:NM_001039464:exon20:c.T3296A:p.V1099D	exonic	ENSG00000184313,ENSG00000271723	NA	nonsynonymous SNV	ENSG00000184313:ENST00000409996:exon18:c.T2000A:p.V667D,ENSG00000184313:ENST00000454855:exon18:c.T1850A:p.V617D,ENSG00000271723:ENST00000414150:exon20:c.T3296A:p.V1099D,ENSG00000184313:ENST00000421030:exon20:c.T3296A:p.V1099D	NA	NA	1p32.3	NA	NA	NA	NA	rs646356	0.91	0.91	0.904	0.917931	0.832	0.9365	0.9251	0.9871	0.8885	0.83	0.95	0.91	0.97	0.8727	0.97	1	T	0.0	B	0.0	B	0.888	N	0.999	P	-1.845	N	1.53	T	-0.985	T	0.000	T	0.175	-1.784	0.01	2.63	0.062	0.573	5.071	-1.783989	NA	0.67	0.834484	0.967539	NA	0.928	NA	5.7941494
1073	5	94749723	94749723	G	A	exonic	FAM81B	NA	synonymous SNV	FAM81B:NM_152548:exon4:c.G366A:p.A122A	exonic	ENSG00000153347	NA	synonymous SNV	ENSG00000153347:ENST00000503361:exon3:c.G204A:p.A68A,ENSG00000153347:ENST00000283357:exon4:c.G366A:p.A122A	Score=428;Name=lod=73	NA	5q15	NA	NA	NA	NA	rs7726891	0.24	0.24	0.27	0.217652	0.334	0.1071	0.2406	0.2428	0.1616	0.32	0.11	0.25	0.24	0.2495	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.19298	NA	NA	0.289184	0.253367	NA	0.391	NA	5.7939826
1073	1	209953706	209953706	C	T	intronic	TRAF3IP3	NA	NA	NA	intronic	ENSG00000009790	NA	NA	NA	NA	NA	1q32.2	NA	Name=Pol2(b)	Name=13	NA	rs11590807	0.15	0.15	0.13	0.127995	0.2068	0.0804	0.2061	0.0673	0.1227	0.21	0.09	0.19	0.09	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.003437	NA	NA	NA	NA	NA	0.188	NA	5.7932
1073	16	74877754	74877754	C	T	intergenic	FA2H,WDR59	dist=69025;dist=29717	NA	NA	ncRNA_exonic	ENSG00000261458	NA	NA	NA	Score=531;Name=lod=192	NA	16q23.1	NA	NA	Name=13	NA	rs12922918	0.3	0.3	0.237	0.321685	0.2068	0.5427	0.4265	0.1195	0.411	0.22	0.56	0.33	0.11	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.124531	NA	NA	NA	NA	NA	0.225	NA	5.7932
1073	7	75959188	75959188	G	A	exonic	YWHAG	NA	synonymous SNV	YWHAG:NM_012479:exon2:c.C450T:p.S150S	exonic	ENSG00000170027	NA	synonymous SNV	ENSG00000170027:ENST00000307630:exon2:c.C450T:p.S150S	NA	NA	7q11.23	NA	NA	NA	Score=76;Name=2196919.4_0_+_76	rs2072435	0.34	0.34	0.318	0.3125	0.2982	0.4454	0.2896	0.329	0.184	0.29	0.45	0.31	0.31	0.291	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.058387	NA	NA	0.284884	0.302769	NA	0.261	NA	5.7925826
1073	19	53344701	53344701	A	G	exonic	ZNF468	NA	synonymous SNV	ZNF468:NM_001008801:exon4:c.T846C:p.H282H	exonic	ENSG00000204604	NA	synonymous SNV	ENSG00000204604:ENST00000390651:exon4:c.T687C:p.H229H,ENSG00000204604:ENST00000595646:exon4:c.T846C:p.H282H,ENSG00000204604:ENST00000396409:exon5:c.T687C:p.H229H	NA	NA	19q13.41	NA	Name=SETDB1	NA	NA	rs10420793	0.3	0.3	0.298	0.360024	0.2674	0.1101	0.2752	0.562	0.5	0.27	0.11	0.29	0.56	0.3118	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.00822	NA	NA	0.295	0.520654	ID=COSM148724;OCCURENCE=1(stomach)	0.348	NA	5.7924666
1073	17	26676135	26676135	C	T	exonic	POLDIP2	NA	unknown	UNKNOWN	exonic	ENSG00000004142	NA	synonymous SNV	ENSG00000004142:ENST00000540200:exon11:c.G963A:p.S321S	Score=613;Name=lod=413	NA	17q11.2	NA	Name=Pol2	NA	NA	rs13469	0.54	0.54	0.515	0.505192	0.499	0.7073	0.562	0.3487	0.4744	0.49	0.78	0.56	0.34	0.5226	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.505848	2.505848	NA	0.519796	0.361833	NA	0.486	NA	5.7919373
1073	22	39069181	39069181	T	C	exonic	CBY1	NA	synonymous SNV	CBY1:NM_015373:exon5:c.T321C:p.A107A,CBY1:NM_001002880:exon6:c.T450C:p.A150A	exonic	ENSG00000100211	NA	synonymous SNV	ENSG00000100211:ENST00000216029:exon5:c.T321C:p.A107A,ENSG00000100211:ENST00000396811:exon6:c.T321C:p.A107A	NA	NA	22q13.1	Score=921;Name=V$NFE2_01	NA	NA	NA	rs3747174	0.31	0.31	0.301	0.285743	0.2932	0.3502	0.2032	0.2897	0.2648	0.3	0.38	0.23	0.31	0.2893	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.082683	NA	NA	0.292326	0.290286	NA	0.333	NA	5.7918406
1073	1	19596156	19596156	G	T	ncRNA_exonic	AKR7L	NA	NA	NA	exonic	ENSG00000211454	NA	unknown	UNKNOWN	Score=494;Name=lod=136	NA	1p36.13	Score=759;Name=V$HTF_01	Name=CTCF	NA	NA	rs6665756	0.66	0.66	0.645	0.665935	0.6918	0.8016	0.7349	0.3986	0.8119	0.68	0.81	0.72	0.41	0.6863	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.012965	NA	NA	0.663419	0.436416	NA	0.428	NA	5.7918143
1073	19	8553630	8553630	C	T	exonic	HNRNPM	NA	synonymous SNV	HNRNPM:NM_005968:exon16:c.C2085T:p.G695G,HNRNPM:NM_031203:exon17:c.C1968T:p.G656G	exonic	ENSG00000099783	NA	synonymous SNV	ENSG00000099783:ENST00000325495:exon16:c.C2085T:p.G695G,ENSG00000099783:ENST00000348943:exon17:c.C1968T:p.G656G	Score=624;Name=lod=460	NA	19p13.2	Score=823;Name=V$RREB1_01	NA	Name=2	NA	rs6992	0.89	0.89	0.867	0.875998	0.9682	0.9802	0.9395	0.6225	0.9714	0.97	0.99	0.95	0.61	0.9414	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.479845	NA	NA	0.965465	0.669315	NA	0.841	NA	5.7916016
1073	9	127619005	127619005	G	C	intronic	WDR38	NA	NA	NA	intronic	ENSG00000136918	NA	NA	NA	NA	NA	9q33.3	NA	Name=Pol2-4H8,ZNF263,Pol2(b),Pol2(phosphoS2),Pol2	Name=15	NA	rs74942099	0.04	0.04	0.037	0.0289537	0.0815	0.001	0.036	0.0061	0.0297	0.07	0.0017	0.05	0.01	0.0513	0.076	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.031784	NA	NA	0.075875	0.01214	NA	0.022	NA	5.791325
1073	5	178413947	178413947	T	C	exonic	GRM6	NA	synonymous SNV	GRM6:NM_000843:exon7:c.A1392G:p.G464G	exonic	ENSG00000113262	NA	synonymous SNV	ENSG00000113262:ENST00000231188:exon7:c.A1392G:p.G464G,ENSG00000113262:ENST00000517717:exon8:c.A1392G:p.G464G	Score=361;Name=lod=39	NA	5q35.3	NA	NA	NA	NA	rs11746675	0.57	0.57	0.546	0.535543	0.6382	0.5863	0.6066	0.3971	0.5143	0.64	0.59	0.58	0.45	0.5997	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.095903	NA	NA	0.637442	0.433727	NA	0.558	CLINSIG=untested;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000086026.1;CLNDSDB=.;CLNDSDBID=.	5.7913246
1073	3	134825512	134825512	G	C	intronic	EPHB1	NA	NA	NA	intronic	ENSG00000154928	NA	NA	NA	NA	NA	3q22.2	NA	Name=NRSF	Name=39	NA	rs3732567	0.34	0.34	0.284	0.336062	0.2087	0.7728	0.3646	0.0303	0.41	0.21	0.79	0.31	0.04	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.683667	NA	NA	NA	NA	NA	0.174	NA	5.7913
1073	17	73515237	73515237	A	G	intronic	TSEN54	NA	NA	NA	intronic	ENSG00000182173	NA	NA	NA	NA	NA	17q25.1	NA	Name=CTCF_(SC-5916),CTCF	Name=5	NA	rs55786842	0.2	0.2	0.194	0.197484	0.2087	0.0298	0.1657	0.3517	0.1728	0.2	0.03	0.22	0.4	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.171652	NA	NA	NA	NA	NA	0.355	NA	5.7913
1073	20	30381758	30381758	G	C	exonic	TPX2	NA	synonymous SNV	TPX2:NM_012112:exon14:c.G1617C:p.S539S	exonic	ENSG00000088325	NA	synonymous SNV	ENSG00000088325:ENST00000300403:exon14:c.G1617C:p.S539S,ENSG00000088325:ENST00000340513:exon15:c.G1725C:p.S575S	Score=594;Name=lod=347	NA	20q11.21	NA	NA	NA	NA	rs1062794	0.32	0.32	0.332	0.291733	0.3161	0.001	0.2435	0.6778	0.0787	0.33	0.0017	0.29	0.69	0.2687	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.745135	NA	NA	0.290698	0.58965	NA	0.297	NA	5.7911686
1073	17	17394611	17394611	G	A	exonic	MED9	NA	synonymous SNV	MED9:NM_018019:exon2:c.G243A:p.P81P	exonic	ENSG00000141026	NA	synonymous SNV	ENSG00000141026:ENST00000268711:exon2:c.G243A:p.P81P	NA	NA	17p11.2	NA	NA	Name=4	NA	rs1242489	0.21	0.21	0.182	0.159944	0.3211	0.1409	0.2925	0.025	0.1022	0.31	0.15	0.32	0.03	0.25	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.200073	NA	NA	0.304535	0.072628	NA	0.181	NA	5.7910316
1073	7	143085822	143085822	G	A	intronic	ZYX	NA	NA	NA	intronic	ENSG00000159840	NA	NA	NA	NA	NA	7q34	NA	Name=CTCF_(SC-5916),Pol2,CTCF	Name=23	NA	rs41277428	0.04	0.04	0.04	0.0295527	0.0755	NA	0.0202	0.0416	0.0031	0.09	NA	0.02	0.04	0.0609	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.305763	NA	NA	0.072791	0.054925	NA	0.08	NA	5.790809
1073	11	64950970	64950970	C	T	exonic	CAPN1	NA	synonymous SNV	CAPN1:NM_001198868:exon4:c.C363T:p.I121I,CAPN1:NM_001198869:exon4:c.C363T:p.I121I,CAPN1:NM_005186:exon4:c.C363T:p.I121I	exonic	ENSG00000014216	NA	synonymous SNV	ENSG00000014216:ENST00000526468:exon1:c.C48T:p.I16I,ENSG00000014216:ENST00000527323:exon3:c.C363T:p.I121I,ENSG00000014216:ENST00000279247:exon4:c.C363T:p.I121I,ENSG00000014216:ENST00000524773:exon4:c.C363T:p.I121I,ENSG00000014216:ENST00000526954:exon4:c.C363T:p.I121I,ENSG00000014216:ENST00000526966:exon4:c.C363T:p.I121I,ENSG00000014216:ENST00000527699:exon4:c.C363T:p.I121I,ENSG00000014216:ENST00000527739:exon4:c.C363T:p.I121I,ENSG00000014216:ENST00000528396:exon4:c.C363T:p.I121I,ENSG00000014216:ENST00000529133:exon4:c.C363T:p.I121I,ENSG00000014216:ENST00000531068:exon4:c.C363T:p.I121I,ENSG00000014216:ENST00000533129:exon4:c.C363T:p.I121I,ENSG00000014216:ENST00000533820:exon4:c.C363T:p.I121I,ENSG00000014216:ENST00000533909:exon4:c.C363T:p.I121I,ENSG00000014216:ENST00000534373:exon5:c.C363T:p.I121I	Score=596;Name=lod=352	NA	11q13.1	NA	NA	NA	NA	rs17583	0.26	0.26	0.223	0.244609	0.3012	0.2966	0.4035	0.053	0.2791	0.31	0.28	0.35	0.07	0.2898	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.298739	NA	NA	0.285139	0.091968	ID=COSM1355902;OCCURENCE=1(large_intestine)	0.29	NA	5.7905276
1073	4	88401616	88401616	A	G	exonic	SPARCL1	NA	synonymous SNV	SPARCL1:NM_004684:exon9:c.T1725C:p.D575D,SPARCL1:NM_001128310:exon10:c.T1725C:p.D575D	exonic	ENSG00000152583	NA	synonymous SNV	ENSG00000152583:ENST00000282470:exon9:c.T1725C:p.D575D,ENSG00000152583:ENST00000418378:exon10:c.T1725C:p.D575D,ENSG00000152583:ENST00000503414:exon10:c.T1350C:p.D450D	Score=583;Name=lod=312	NA	4q22.1	Score=886;Name=V$SOX9_B1	NA	NA	NA	rs9933	0.7	0.7	0.677	0.747804	0.5964	0.631	0.7939	0.9017	0.7832	0.59	0.62	0.76	0.89	0.6714	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.066237	NA	NA	0.608605	0.85202	NA	0.739	NA	5.7902616
1073	11	372700	372700	G	C	exonic	B4GALNT4	NA	synonymous SNV	B4GALNT4:NM_178537:exon3:c.G294C:p.G98G	exonic	ENSG00000182272	NA	synonymous SNV	ENSG00000182272:ENST00000329962:exon3:c.G294C:p.G98G	NA	NA	11p15.5	Score=747;Name=V$STAT3_01	NA	NA	NA	rs35475866	0.34	0.34	0.284	0.330671	0.2952	0.3839	0.2997	0.3253	0.3415	0.3	0.43	0.32	0.31	0.3046	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.187769	NA	NA	0.277388	0.326782	ID=COSM1561414;OCCURENCE=1(large_intestine)	0.261	NA	5.7894786
1073	10	88441032	88441032	A	G	intronic	LDB3	NA	NA	NA	intronic	ENSG00000122367	NA	NA	NA	NA	NA	10q23.2	NA	Name=AP-2alpha,AP-2gamma	Name=7	NA	rs2675686	0.2	0.2	0.203	0.195887	0.2107	0.0625	0.2046	0.323	0.1401	0.2	0.07	0.26	0.32	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.116259	NA	NA	NA	NA	NA	0.312	NA	5.7893
1073	2	10267211	10267211	T	C	intronic	RRM2	NA	NA	NA	intronic	ENSG00000171848	NA	NA	NA	Score=417;Name=lod=66	NA	2p25.1	NA	Name=Pol2(b),GATA-1,Pol2	NA	NA	rs61754180	0.05	0.05	0.052	0.0527157	0.0676	0.0456	0.0749	0.0121	0.0838	0.07	0.05	0.07	0.02	0.0676	0.076	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.009282	NA	NA	0.076279	0.032456	NA	0.043	NA	5.788521
1073	7	149031681	149031681	A	G	intergenic	LOC155060,ZNF777	dist=37278;dist=96773	NA	NA	ncRNA_exonic	ENSG00000215311	NA	NA	NA	Score=472;Name=lod=110	NA	7q36.1	NA	Name=CTCF	NA	NA	rs7785749	0.19	0.19	0.156	0.201078	0.2117	0.2232	0.3357	0.0151	0.3231	0.2	0.26	0.3	0.02	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.425315	1.425315	NA	NA	NA	NA	0.109	NA	5.7883
1073	2	169721381	169721381	A	G	exonic	NOSTRIN	NA	synonymous SNV	NOSTRIN:NM_001171632:exon15:c.A1338G:p.G446G,NOSTRIN:NM_052946:exon15:c.A1188G:p.G396G,NOSTRIN:NM_001039724:exon16:c.A1422G:p.G474G,NOSTRIN:NM_001171631:exon21:c.A1593G:p.G531G	exonic	ENSG00000163072	NA	synonymous SNV	ENSG00000163072:ENST00000397206:exon15:c.A1188G:p.G396G,ENSG00000163072:ENST00000397209:exon15:c.A1338G:p.G446G,ENSG00000163072:ENST00000421711:exon15:c.A1338G:p.G446G,ENSG00000163072:ENST00000445023:exon15:c.A1188G:p.G396G,ENSG00000163072:ENST00000317647:exon16:c.A1422G:p.G474G,ENSG00000163072:ENST00000444448:exon19:c.A1593G:p.G531G,ENSG00000163072:ENST00000458381:exon21:c.A1593G:p.G531G	Score=534;Name=lod=198	NA	2q31.1	NA	NA	NA	NA	rs3931	0.23	0.23	0.216	0.207268	0.2903	0.2688	0.1974	0.087	0.228	0.29	0.29	0.23	0.09	0.2712	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.365913	1.365913	NA	0.317429	0.10032	NA	0.232	NA	5.7877376
1073	10	25312689	25312689	A	G	exonic	THNSL1	NA	synonymous SNV	THNSL1:NM_024838:exon3:c.A537G:p.G179G	exonic	ENSG00000185875	NA	synonymous SNV	ENSG00000185875:ENST00000376356:exon3:c.A537G:p.G179G,ENSG00000185875:ENST00000524413:exon3:c.A537G:p.G179G	Score=468;Name=lod=106	NA	10p12.1	NA	NA	NA	NA	rs4748997	0.31	0.31	0.271	0.307907	0.2714	0.4851	0.4308	0.0749	0.3906	0.27	0.49	0.4	0.08	0.323	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.043791	NA	NA	0.285	0.093055	NA	0.319	NA	5.7872666
1073	22	42221650	42221650	C	T	intronic	CCDC134	NA	NA	NA	intronic	ENSG00000100147	NA	NA	NA	NA	NA	22q13.2	NA	Name=Egr-1	Name=52	NA	rs41281295	0.13	0.13	0.087	0.134385	0.1054	0.0645	0.3761	0.0666	0.1564	0.1	0.06	0.37	0.08	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.48302	NA	NA	0.107986	0.068493	NA	0.13	NA	5.786614
1073	1	96913449	96913449	C	T	intergenic	FLJ31662,PTBP2	dist=968537;dist=273726	NA	NA	ncRNA_exonic	ENSG00000228502	NA	NA	NA	Score=869;Name=lod=4517	NA	1p21.3	NA	Name=Pol2-4H8	NA	NA	rs11165631	0.2	0.2	0.187	0.176518	0.2137	0.3145	0.1527	0.1014	0.1145	0.22	0.29	0.17	0.09	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.430751	NA	NA	NA	NA	NA	0.065	NA	5.7863
1073	1	96913490	96913490	G	A	intergenic	FLJ31662,PTBP2	dist=968578;dist=273685	NA	NA	ncRNA_exonic	ENSG00000228502	NA	NA	NA	Score=869;Name=lod=4517	NA	1p21.3	NA	Name=Pol2-4H8	NA	NA	rs11165632	0.2	0.2	0.163	0.176318	0.2137	0.3145	0.1527	0.1014	0.1135	0.22	0.29	0.17	0.09	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.075969	3.075969	NA	NA	NA	NA	0.014	NA	5.7863
1073	5	179268779	179268779	C	T	intronic	C5orf45	NA	NA	NA	intronic	ENSG00000161010	NA	NA	NA	NA	NA	5q35.3	NA	Name=Pol2	Name=13	NA	rs2303677	0.28	0.28	0.221	0.304113	0.2137	0.5099	0.4352	0.0658	0.4141	0.2	0.51	0.37	0.06	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.456666	NA	NA	NA	NA	NA	0.145	NA	5.7863
1073	20	31897554	31897554	G	C	exonic	BPIFB1	NA	nonsynonymous SNV	BPIFB1:NM_033197:exon16:c.G1436C:p.S479T	exonic	ENSG00000125999	NA	nonsynonymous SNV	ENSG00000125999:ENST00000253354:exon16:c.G1436C:p.S479T	NA	NA	20q11.21	NA	NA	NA	NA	rs1999663	0.67	0.67	0.691	0.675319	0.498	0.7669	0.5807	0.8018	0.6595	0.53	0.8	0.58	0.79	0.5652	0.8	1	T	0.001	B	0.001	B	0.008	N	1.000	P	1.39	L	3.92	T	-0.947	T	0.000	T	0.011	-1.08	0.162	-1.88	-0.594	0.239	7.385	-1.080191	NA	1	0.484186	0.731049	NA	0.659	NA	5.7859474
1073	19	1036444	1036444	G	A	exonic	CNN2	NA	synonymous SNV	CNN2:NM_201277:exon5:c.G420A:p.S140S,CNN2:NM_004368:exon6:c.G537A:p.S179S	exonic	ENSG00000064666	NA	synonymous SNV	ENSG00000064666:ENST00000348419:exon5:c.G420A:p.S140S,ENSG00000064666:ENST00000562075:exon5:c.G231A:p.S77S,ENSG00000064666:ENST00000568865:exon5:c.G408A:p.S136S,ENSG00000064666:ENST00000263097:exon6:c.G537A:p.S179S,ENSG00000064666:ENST00000562958:exon6:c.G600A:p.S200S,ENSG00000064666:ENST00000565096:exon6:c.G504A:p.S168S	NA	NA	19p13.3	NA	Name=PAX5-N19,PAX5-C20,Pol2-4H8,Pol2	NA	NA	rs930231	0.18	0.18	0.163	0.169928	0.3002	0.0496	0.3646	0.0439	0.1922	0.29	0.05	0.35	0.07	0.2628	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.190881	NA	NA	0.317907	0.091012	NA	0.341	NA	5.7857596
1073	8	31024638	31024638	C	T	exonic	WRN	NA	synonymous SNV	WRN:NM_000553:exon34:c.C4083T:p.S1361S	exonic	ENSG00000165392	NA	synonymous SNV	ENSG00000165392:ENST00000298139:exon34:c.C4083T:p.S1361S	NA	NA	8p12	NA	NA	NA	NA	rs1801196	0.27	0.27	0.275	0.273562	0.2942	0.2282	0.2536	0.2632	0.3272	0.31	0.26	0.23	0.27	0.2989	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.998944	NA	NA	0.288372	0.269859	NA	0.268	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118879.2;CLNDSDB=.;CLNDSDBID=.	5.7851946
1073	19	33579128	33579128	T	C	exonic	GPATCH1	NA	synonymous SNV	GPATCH1:NM_018025:exon2:c.T162C:p.S54S	exonic	ENSG00000076650	NA	synonymous SNV	ENSG00000076650:ENST00000170564:exon2:c.T162C:p.S54S,ENSG00000076650:ENST00000592165:exon2:c.T162C:p.S54S	Score=590;Name=lod=333	NA	19q13.11	NA	NA	NA	NA	rs7259333	0.44	0.44	0.486	0.533946	0.2416	0.5099	0.2867	0.8018	0.6728	0.25	0.5	0.3	0.78	0.371	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.997472	NA	NA	0.268953	0.72719	NA	0.449	NA	5.7851136
1074	3	126219627	126219627	G	A	exonic	UROC1	NA	synonymous SNV	UROC1:NM_144639:exon11:c.C1056T:p.G352G,UROC1:NM_001165974:exon12:c.C1236T:p.G412G	exonic	ENSG00000159650	NA	synonymous SNV	ENSG00000159650:ENST00000290868:exon11:c.C1056T:p.G352G,ENSG00000159650:ENST00000383579:exon12:c.C1236T:p.G412G	NA	NA	3q21.3	NA	NA	NA	NA	rs34025926	0.2	0.2	0.203	0.216653	0.3091	0.005	0.2003	0.2602	0.2924	0.32	0.01	0.23	0.23	0.2606	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.983792	NA	NA	0.312093	0.263731	NA	0.304	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118812.2;CLNDSDB=.;CLNDSDBID=.	5.7848736
1074	9	135983504	135983504	T	C	exonic	RALGDS	NA	synonymous SNV	RALGDS:NM_001042368:exon6:c.A903G:p.A301A,RALGDS:NM_001271774:exon6:c.A981G:p.A327A,RALGDS:NM_001271775:exon6:c.A1065G:p.A355A,RALGDS:NM_001271776:exon6:c.A1032G:p.A344A,RALGDS:NM_006266:exon6:c.A1068G:p.A356A	exonic	ENSG00000160271	NA	synonymous SNV	ENSG00000160271:ENST00000372047:exon6:c.A1032G:p.A344A,ENSG00000160271:ENST00000372050:exon6:c.A1068G:p.A356A,ENSG00000160271:ENST00000372062:exon6:c.A981G:p.A327A,ENSG00000160271:ENST00000393157:exon6:c.A1065G:p.A355A,ENSG00000160271:ENST00000393160:exon6:c.A903G:p.A301A,ENSG00000160271:ENST00000542690:exon11:c.A1281G:p.A427A	NA	NA	9q34.2	NA	Name=SRF	NA	NA	rs2285375	0.3	0.3	0.291	0.288938	0.2972	0.1577	0.353	0.4796	0.1125	0.29	0.17	0.38	0.42	0.2795	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.053412	NA	NA	0.305581	0.437358	NA	0.261	NA	5.7843856
1074	8	140769384	140769384	T	C	intronic	TRAPPC9	NA	NA	NA	intronic	ENSG00000167632	NA	NA	NA	Score=251;Name=lod=14	NA	8q24.3	NA	Name=ZNF263	NA	NA	rs11783492	0.26	0.26	0.228	0.311502	0.2157	0.2262	0.317	0.4803	0.2658	0.2	0.19	0.29	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.446201	NA	NA	NA	NA	NA	NA	NA	5.7843
1074	19	7998587	7998587	C	T	intronic	TIMM44	NA	NA	NA	intronic	ENSG00000104980	NA	NA	NA	NA	NA	19p13.2	NA	Name=Rad21,CTCF,ZBTB7A_(SC-34508),CTCF_(SC-5916)	Name=3	NA	rs78845055	0.1	0.1	0.084	0.0700879	0.2157	0.002	0.0865	0.0174	0.0501	0.21	0.0017	0.1	0.02	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.096619	NA	NA	NA	NA	NA	0.101	NA	5.7843
1074	2	55404794	55404794	G	A	exonic	CLHC1	NA	nonsynonymous SNV	CLHC1:NM_001135598:exon10:c.C1142T:p.A381V,CLHC1:NM_152385:exon12:c.C1508T:p.A503V	exonic	ENSG00000162994	NA	nonsynonymous SNV	ENSG00000162994:ENST00000406437:exon5:c.C161T:p.A54V,ENSG00000162994:ENST00000406076:exon10:c.C1142T:p.A381V,ENSG00000162994:ENST00000407122:exon11:c.C1508T:p.A503V,ENSG00000162994:ENST00000401408:exon12:c.C1508T:p.A503V	NA	NA	2p16.1	NA	NA	NA	NA	rs14026	0.5	0.5	0.498	0.469249	0.5179	0.4851	0.4683	0.4796	0.3896	0.52	0.53	0.49	0.45	0.5004	0.53	0.62	T	0.0	B	0.0	B	0.577	N	1.000	P	-1.01	N	2.27	T	-0.923	T	0.000	T	0.032	-0.693	0.994	1.85	0.427	0.430	3.594	-0.693036	NA	1	0.531628	0.471617	NA	0.471	NA	5.7834054
1074	17	12899963	12899963	T	C	exonic	ELAC2	NA	synonymous SNV	ELAC2:NM_001165962:exon16:c.A1440G:p.T480T,ELAC2:NM_018127:exon17:c.A1560G:p.T520T,ELAC2:NM_173717:exon17:c.A1557G:p.T519T	exonic	ENSG00000006744	NA	synonymous SNV	ENSG00000006744:ENST00000426905:exon16:c.A1440G:p.T480T,ENSG00000006744:ENST00000338034:exon17:c.A1560G:p.T520T,ENSG00000006744:ENST00000395962:exon17:c.A1503G:p.T501T	Score=548;Name=lod=226	NA	17p12	NA	NA	NA	NA	rs11545302	0.2	0.2	0.19	0.207268	0.3151	0.0347	0.2406	0.2057	0.2526	0.33	0.03	0.23	0.18	0.2716	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.485137	1.485137	NA	0.29686	0.217204	NA	0.174	NA	5.7831066
1074	5	140778256	140778256	G	A	exonic	PCDHGB5	NA	nonsynonymous SNV	PCDHGB5:NM_018925:exon1:c.G562A:p.G188S,PCDHGB5:NM_032099:exon1:c.G562A:p.G188S	intronic	ENSG00000081853,ENSG00000204956,ENSG00000253485,ENSG00000253537,ENSG00000253731,ENSG00000253767,ENSG00000253910,ENSG00000253953,ENSG00000254221,ENSG00000254245,ENSG00000262209,ENSG00000262576	NA	NA	NA	Score=329;Name=lod=29	NA	5q31.3	NA	NA	NA	NA	rs6867460	0.19	0.19	0.178	0.202875	0.1024	0.1548	0.1902	0.32	0.2065	0.11	0.17	0.18	0.32	0.1584	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.549843	NA	NA	0.122801	0.315733	NA	0.188	NA	5.7830657
1074	8	87494974	87494974	G	C	intronic	RMDN1	NA	NA	NA	ncRNA_exonic	ENSG00000250569	NA	NA	NA	NA	NA	8q21.3	NA	Name=CTCF_(C-20),CTCF	Name=5	NA	rs4961194	0.57	0.57	0.554	0.572883	0.5507	0.5823	0.6628	0.4932	0.6299	0.56	0.6	0.64	0.5	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.00949	NA	NA	NA	NA	NA	0.457	NA	5.7826333
1074	2	187626338	187626338	C	T	exonic	FAM171B	NA	synonymous SNV	FAM171B:NM_177454:exon8:c.C1269T:p.D423D	exonic	ENSG00000144369	NA	synonymous SNV	ENSG00000144369:ENST00000304698:exon8:c.C1269T:p.D423D	Score=369;Name=lod=42	NA	2q32.1	NA	NA	NA	NA	rs13026081	0.17	0.17	0.147	0.165335	0.3171	0.0456	0.232	0.0113	0.2935	0.33	0.04	0.24	0.02	0.2624	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.058055	NA	NA	0.30456	0.057195	NA	0.123	NA	5.7826066
1074	1	119762593	119762593	G	A	intergenic	WARS2,HAO2	dist=79298;dist=148809	NA	NA	ncRNA_exonic	ENSG00000227056	NA	NA	NA	Score=722;Name=lod=1150	NA	1p12	NA	NA	Name=2	NA	rs12119474	0.16	0.16	0.147	0.18151	0.2177	0.0516	0.147	0.2027	0.274	0.22	0.05	0.17	0.2	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.287212	NA	NA	NA	NA	NA	0.268	NA	5.7823
1074	18	2740714	2740714	A	G	exonic	SMCHD1	NA	synonymous SNV	SMCHD1:NM_015295:exon28:c.A3528G:p.T1176T	exonic	ENSG00000101596	NA	synonymous SNV	ENSG00000101596:ENST00000577880:exon17:c.A1941G:p.T647T,ENSG00000101596:ENST00000261598:exon28:c.A3528G:p.T1176T,ENSG00000101596:ENST00000320876:exon28:c.A3528G:p.T1176T	Score=544;Name=lod=216	NA	18p11.32	NA	NA	NA	NA	rs12327477	0.33	0.33	0.306	0.386182	0.2634	0.5228	0.4467	0.2685	0.4877	0.26	0.44	0.38	0.27	0.3382	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.622347	NA	NA	0.28293	0.263672	NA	0.348	NA	5.7821366
1074	9	22447655	22447655	T	A	exonic	DMRTA1	NA	synonymous SNV	DMRTA1:NM_022160:exon1:c.T591A:p.G197G	exonic	ENSG00000176399	NA	synonymous SNV	ENSG00000176399:ENST00000325870:exon1:c.T591A:p.G197G	NA	NA	9p21.3	NA	Name=Pol2,CTCF,AP-2alpha,AP-2gamma	NA	NA	rs558612	0.31	0.31	0.291	0.311701	0.3022	0.2331	0.3963	0.3669	0.2679	0.3	0.24	0.39	0.36	0.3	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.011603	NA	NA	0.282543	0.331562	NA	0.297	NA	5.7819236
1074	22	19753379	19753379	C	T	intronic	TBX1	NA	NA	NA	intronic	ENSG00000184058	NA	NA	NA	NA	NA	22q11.21	NA	Name=Pol2-4H8,ZNF263,Egr-1,ELF1_(SC-631),Pol2,ZBTB33,E2F6_(H-50)	Name=34	NA	rs41298836	0.08	0.08	0.095	0.0754792	0.0547	NA	0.062	0.202	0.0133	0.06	NA	0.08	0.19	0.0953	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.046984	NA	NA	0.068251	0.181943	NA	NA	NA	5.781749
1074	9	35972227	35972227	C	T	intergenic	OR2S2,RECK	dist=14076;dist=64683	NA	NA	ncRNA_exonic	ENSG00000213866	NA	NA	NA	NA	NA	9p13.3	NA	Name=Egr-1	Name=8	NA	rs1810653	0.26	0.26	0.254	0.312899	0.2187	0.1339	0.1744	0.593	0.3139	0.21	0.12	0.17	0.56	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.397168	1.397168	NA	NA	NA	NA	0.29	NA	5.7813
1074	6	114378970	114378970	C	T	exonic	HS3ST5	NA	synonymous SNV	HS3ST5:NM_153612:exon2:c.G492A:p.E164E	exonic	ENSG00000249853	NA	synonymous SNV	ENSG00000249853:ENST00000411826:exon2:c.G492A:p.E164E,ENSG00000249853:ENST00000312719:exon5:c.G492A:p.E164E	Score=429;Name=lod=74	NA	6q21	NA	NA	NA	NA	rs2282237	0.3	0.3	0.274	0.301917	0.3032	0.3512	0.4265	0.1604	0.3528	0.29	0.34	0.4	0.2	0.2995	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.500404	NA	NA	0.282791	0.189741	ID=COSM150163;OCCURENCE=1(stomach)	0.37	NA	5.7811756
1074	3	175189447	175189447	G	A	exonic	NAALADL2	NA	synonymous SNV	NAALADL2:NM_207015:exon9:c.G1554A:p.Q518Q	exonic	ENSG00000177694	NA	synonymous SNV	ENSG00000177694:ENST00000454872:exon9:c.G1554A:p.Q518Q	Score=475;Name=lod=114	NA	3q26.31	Score=784;Name=V$HTF_01	NA	NA	NA	rs9290555	0.59	0.59	0.548	0.547125	0.6402	0.6756	0.6585	0.3434	0.5153	0.65	0.69	0.65	0.33	0.6186	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.583162	NA	NA	0.62684	0.359444	NA	0.464	NA	5.7810266
1074	15	85198362	85198362	G	T	UTR3	NMB	NM_021077:c.*243C>A,NM_205858:c.*139C>A	NA	NA	UTR3	ENSG00000197696	ENST00000394588:c.*139C>A,ENST00000360476:c.*243C>A	NA	NA	NA	NA	15q25.2	Score=678;Name=V$P53_01	Name=CtBP2	NA	NA	rs1107179	0.71	0.71	0.711	0.726637	0.5527	0.8115	0.6902	0.8812	0.635	0.56	0.81	0.65	0.89	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.094377	NA	NA	NA	NA	NA	0.717	NA	5.7806334
1074	6	15511409	15511409	C	T	intronic	JARID2	NA	NA	NA	intronic	ENSG00000008083	NA	NA	NA	NA	NA	6p22.3	NA	Name=Pol2-4H8	Name=13	NA	rs35360051	0.13	0.13	0.128	0.126198	0.2197	NA	0.1354	0.1611	0.1063	0.21	NA	0.16	0.15	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.783552	NA	NA	NA	NA	NA	0.181	NA	5.7803
1074	6	31097301	31097301	C	T	intronic	PSORS1C1	NA	NA	NA	intronic	ENSG00000204540	NA	NA	NA	NA	Name=Chronic obstructive pulmonary disease-related biomarkers	6p21.33	NA	NA	Name=7	NA	rs3130559	0.31	0.31	0.308	0.31849	0.2197	0.3879	0.3458	0.3926	0.229	0.22	0.36	0.35	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.838176	NA	NA	NA	NA	NA	0.275	NA	5.7803
1074	9	18661848	18661848	T	G	intronic	ADAMTSL1	NA	NA	NA	intronic	ENSG00000178031	NA	NA	NA	NA	NA	9p22.1	NA	Name=STAT1,p300	Name=2	NA	rs41268977	0.11	0.11	0.107	0.125998	0.2197	0.0625	0.1499	0.0129	0.2311	0.22	0.03	0.16	0.01	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.109471	4.109471	NA	NA	NA	NA	0.058	NA	5.7803
1074	3	49714225	49714225	T	C	exonic	APEH	NA	synonymous SNV	APEH:NM_001640:exon9:c.T852C:p.Y284Y	exonic	ENSG00000164062	NA	synonymous SNV	ENSG00000164062:ENST00000442186:exon7:c.T627C:p.Y209Y,ENSG00000164062:ENST00000449966:exon7:c.T549C:p.Y183Y,ENSG00000164062:ENST00000457042:exon7:c.T705C:p.Y235Y,ENSG00000164062:ENST00000296456:exon9:c.T852C:p.Y284Y,ENSG00000164062:ENST00000438011:exon9:c.T852C:p.Y284Y	Score=506;Name=lod=152	NA	3p21.31	NA	NA	NA	NA	rs1131095	0.23	0.23	0.216	0.202676	0.3241	0.0565	0.17	0.2413	0.1994	0.33	0.06	0.23	0.27	0.263	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.415152	NA	NA	0.299767	0.249887	ID=COSM149391;OCCURENCE=1(stomach)	0.312	NA	5.7797996
1074	15	41508037	41508037	A	G	intronic	EXD1	NA	NA	NA	intronic	ENSG00000178997	NA	NA	NA	NA	NA	15q15.1	Score=901;Name=V$EVI1_06	NA	Name=8	NA	rs8025916	0.2	0.2	0.205	0.199481	0.0606	0.1746	0.1268	0.4614	0.0654	0.07	0.19	0.12	0.48	0.1062	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.297866	NA	NA	0.053605	0.384022	NA	0.21	NA	5.779595
1074	12	52403110	52403110	G	A	intronic	GRASP	NA	NA	NA	intronic	ENSG00000161835	NA	NA	NA	NA	NA	12q13.13	NA	Name=c-Fos	Name=10	NA	rs10876227	0.24	0.24	0.228	0.260383	0.2207	0.4464	0.1081	0.1528	0.363	0.22	0.42	0.11	0.15	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.371817	NA	NA	NA	NA	NA	0.21	NA	5.7793
1074	20	25062145	25062145	C	T	intronic	VSX1	NA	NA	NA	intronic	ENSG00000100987	NA	NA	NA	NA	NA	20p11.21	NA	Name=CTCF,Rad21	Name=21	NA	rs6050306	0.25	0.25	0.236	0.290535	0.2207	0.0268	0.3516	0.4992	0.3088	0.22	0.02	0.33	0.51	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.440389	NA	NA	NA	NA	NA	0.152	NA	5.7793
1074	6	138027229	138027229	C	T	intergenic	OLIG3,LOC100130476	dist=211698;dist=117578	NA	NA	ncRNA_exonic	ENSG00000220412	NA	NA	NA	Score=665;Name=lod=672	NA	6q23.3	NA	Name=TCF4	NA	NA	rs472391	0.28	0.28	0.28	0.261382	0.2217	0.4315	0.1729	0.2655	0.184	0.23	0.43	0.15	0.29	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.317388	NA	NA	NA	NA	NA	0.225	NA	5.7783
1074	22	36889930	36889930	A	G	intronic	FOXRED2	NA	NA	NA	intronic	ENSG00000100350	NA	NA	NA	NA	NA	22q12.3	NA	Name=NFKB,PAX5-C20,Max,ELF1_(SC-631),Pol2,IRF4_(M-17)	Name=14	NA	rs2281087	0.26	0.26	0.267	0.27516	0.2217	0.127	0.1484	0.5189	0.2434	0.22	0.15	0.16	0.51	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.258905	NA	NA	NA	NA	NA	0.355	NA	5.7783
1074	14	25100247	25100247	T	C	UTR3	GZMB	NM_004131:c.*30A>G	NA	NA	ncRNA_UTR3	ENSG00000100453	NA	NA	NA	NA	NA	14q12	NA	Name=FOXA1_(SC-101058),TCF4,FOXA1_(C-20)	Name=33	NA	rs2236337	0.27	0.27	0.27	0.288538	0.2455	0.2966	0.2089	0.32	0.3384	0.25	0.26	0.23	0.33	0.2437	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.8365	NA	NA	0.233837	0.3064	ID=COSN164650;OCCURENCE=1(breast)	0.268	NA	5.776963
1074	5	95234350	95234350	A	G	exonic	ELL2	NA	synonymous SNV	ELL2:NM_012081:exon8:c.T1119C:p.P373P	exonic	ENSG00000118985	NA	synonymous SNV	ENSG00000118985:ENST00000237853:exon8:c.T1119C:p.P373P	NA	NA	5q15	Score=848;Name=V$CHOP_01	NA	NA	NA	rs3777204	0.41	0.41	0.398	0.446685	0.2863	0.4643	0.3314	0.6263	0.4325	0.29	0.47	0.31	0.61	0.3342	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.134058	NA	NA	0.269302	0.568543	NA	0.413	NA	5.7768646
1074	17	26092631	26092631	A	G	exonic	NOS2	NA	synonymous SNV	NOS2:NM_000625:exon20:c.T2358C:p.G786G	exonic	ENSG00000007171	NA	synonymous SNV	ENSG00000007171:ENST00000313735:exon20:c.T2358C:p.G786G	Score=387;Name=lod=50	NA	17q11.2	Score=762;Name=V$MIF1_01	NA	NA	NA	rs1060822	0.69	0.69	0.71	0.730831	0.6143	0.6706	0.6484	0.8071	0.8681	0.6	0.69	0.68	0.84	0.6637	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.076472	NA	NA	0.6119	0.776184	NA	0.848	NA	5.7767666
1074	5	137677224	137677224	C	A	intronic	FAM53C	NA	NA	NA	intronic	ENSG00000120709	NA	NA	NA	NA	NA	5q31.2	Score=777;Name=V$CDP_01	NA	Name=4	NA	rs2286060	0.33	0.33	0.336	0.325479	0.2237	0.5625	0.2363	0.3775	0.1789	0.22	0.55	0.2	0.35	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.447798	3.447798	NA	NA	NA	NA	0.297	NA	5.7763
1074	6	152469331	152469331	C	T	exonic	SYNE1	NA	synonymous SNV	SYNE1:NM_033071:exon136:c.G24612A:p.P8204P,SYNE1:NM_182961:exon137:c.G24825A:p.P8275P	exonic	ENSG00000131018	NA	synonymous SNV	ENSG00000131018:ENST00000354674:exon8:c.G1290A:p.P430P,ENSG00000131018:ENST00000539504:exon8:c.G1290A:p.P430P,ENSG00000131018:ENST00000367257:exon17:c.G2763A:p.P921P,ENSG00000131018:ENST00000367251:exon22:c.G3591A:p.P1197P,ENSG00000131018:ENST00000356820:exon52:c.G8397A:p.P2799P,ENSG00000131018:ENST00000423061:exon136:c.G24612A:p.P8204P,ENSG00000131018:ENST00000265368:exon137:c.G24825A:p.P8275P,ENSG00000131018:ENST00000367255:exon137:c.G24825A:p.P8275P,ENSG00000131018:ENST00000448038:exon137:c.G24612A:p.P8204P,ENSG00000131018:ENST00000341594:exon138:c.G23661A:p.P7887P	NA	NA	6q25.1	NA	NA	NA	NA	rs2252748	0.31	0.31	0.275	0.339457	0.2833	0.2976	0.4597	0.3079	0.3978	0.27	0.27	0.46	0.29	0.313	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.421867	NA	NA	0.294419	0.313663	NA	0.196	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118467.2;CLNDSDB=.;CLNDSDBID=.	5.7759476
1074	19	4362691	4362691	G	C	exonic	SH3GL1	NA	synonymous SNV	SH3GL1:NM_001199943:exon7:c.C627G:p.P209P,SH3GL1:NM_001199944:exon8:c.C579G:p.P193P,SH3GL1:NM_003025:exon8:c.C771G:p.P257P	exonic	ENSG00000141985	NA	synonymous SNV	ENSG00000141985:ENST00000417295:exon7:c.C627G:p.P209P,ENSG00000141985:ENST00000269886:exon8:c.C771G:p.P257P,ENSG00000141985:ENST00000598564:exon8:c.C579G:p.P193P	Score=477;Name=lod=116	NA	19p13.3	NA	NA	NA	NA	rs243261	0.39	0.39	0.326	0.391573	0.2744	0.6042	0.4063	0.3434	0.3476	0.27	0.58	0.4	0.33	0.3346	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.302136	NA	NA	0.281744	0.341807	NA	0.29	NA	5.7759226
1074	14	100331876	100331876	T	C	exonic	EML1	NA	synonymous SNV	EML1:NM_001008707:exon3:c.T276C:p.P92P,EML1:NM_004434:exon3:c.T276C:p.P92P	exonic	ENSG00000066629	NA	synonymous SNV	ENSG00000066629:ENST00000262233:exon3:c.T276C:p.P92P,ENSG00000066629:ENST00000327921:exon3:c.T183C:p.P61P,ENSG00000066629:ENST00000334192:exon3:c.T276C:p.P92P,ENSG00000066629:ENST00000553720:exon3:c.T219C:p.P73P,ENSG00000066629:ENST00000554479:exon3:c.T237C:p.P79P,ENSG00000066629:ENST00000555145:exon3:c.T237C:p.P79P,ENSG00000066629:ENST00000556199:exon3:c.T183C:p.P61P,ENSG00000066629:ENST00000556714:exon3:c.T183C:p.P61P,ENSG00000066629:ENST00000556835:exon3:c.T183C:p.P61P,ENSG00000066629:ENST00000556947:exon4:c.T294C:p.P98P	Score=501;Name=lod=145	NA	14q32.2	NA	NA	NA	NA	rs11160553	0.21	0.21	0.182	0.183107	0.3082	0.1369	0.196	0.143	0.1472	0.32	0.12	0.22	0.13	0.2696	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.717256	1.717256	NA	0.313023	0.197685	NA	0.297	NA	5.7758436
1075	11	67205978	67205978	G	A	intronic	CORO1B	NA	NA	NA	intronic	ENSG00000172725	NA	NA	NA	NA	NA	11q13.2	Score=705;Name=V$LUN1_01	Name=CTCF,Pol2,CTCF_(C-20)	Name=17	NA	rs872375	0.4	0.4	0.368	0.354433	0.4165	0.3274	0.5389	0.326	0.226	0.43	0.32	0.51	0.37	0.3896	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.175931	NA	NA	0.41952	0.317334	NA	0.435	NA	5.77438
1075	17	6981353	6981353	G	C	exonic	CLEC10A	NA	synonymous SNV	CLEC10A:NM_006344:exon3:c.C147G:p.L49L,CLEC10A:NM_182906:exon3:c.C147G:p.L49L	exonic	ENSG00000132514	NA	synonymous SNV	ENSG00000132514:ENST00000254868:exon3:c.C147G:p.L49L,ENSG00000132514:ENST00000416562:exon3:c.C147G:p.L49L,ENSG00000132514:ENST00000571664:exon3:c.C147G:p.L49L,ENSG00000132514:ENST00000576617:exon3:c.C147G:p.L49L	Score=313;Name=lod=25	NA	17p13.1	NA	NA	NA	NA	rs732828	0.4	0.4	0.445	0.41234	0.2903	0.2669	0.2882	0.792	0.2628	0.29	0.3	0.27	0.78	0.3177	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.543874	NA	NA	0.284302	0.70177	NA	0.29	NA	5.7743646
1075	1	203831261	203831261	G	A	intronic	SNRPE	NA	NA	NA	intronic	ENSG00000182004	NA	NA	NA	NA	NA	1q32.1	NA	Name=TBP,CEBPB,FOXA2_(SC-6554),Pol2,SP1,Sin3Ak-20,Pol2-4H8,TAF1,WHIP,FOXA1_(C-20)	Name=38	NA	rs11240609	0.08	0.08	0.084	0.0870607	0.1123	0.0387	0.0533	0.1301	0.0767	0.11	0.04	0.07	0.1	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.248541	NA	NA	0.113765	0.125	ID=COSN163401;OCCURENCE=1(breast)	0.072	NA	5.773935
1075	5	33441403	33441403	A	C	intronic	TARS	NA	NA	NA	intronic	ENSG00000113407	NA	NA	NA	NA	NA	5p13.3	NA	Name=ELF1_(SC-631),NFKB,Max,c-Myc,TBP,GABP,ELK4,Pol2(b),E2F6_(H-50),ETS1,USF1_(SC-8983),Pol2-4H8,E2F6,Sin3Ak-20,YY1,Ini1,Egr-1,Pol2,NRSF	Name=98	NA	rs55759090	0.27	0.27	0.206	0.239816	0.2266	0.4653	0.2695	0.0915	0.2004	0.23	0.5	0.22	0.08	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.258574	1.258574	NA	NA	NA	NA	0.275	NA	5.7734
1075	5	169098265	169098265	C	T	intronic	DOCK2	NA	NA	NA	intronic	ENSG00000134516	NA	NA	NA	NA	NA	5q35.1	NA	Name=YY1,PU.1,YY1_(C-20),NFKB,BATF	Name=5	NA	rs12656761	0.2	0.2	0.184	0.210463	0.2266	0.2847	0.17	0.0885	0.3108	0.22	0.28	0.2	0.09	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.310389	NA	NA	NA	NA	NA	0.203	NA	5.7734
1075	1	19027239	19027239	A	G	exonic	PAX7	NA	synonymous SNV	PAX7:NM_001135254:exon6:c.A879G:p.P293P,PAX7:NM_002584:exon6:c.A879G:p.P293P,PAX7:NM_013945:exon6:c.A873G:p.P291P	exonic	ENSG00000009709	NA	synonymous SNV	ENSG00000009709:ENST00000375375:exon6:c.A879G:p.P293P,ENSG00000009709:ENST00000400661:exon6:c.A873G:p.P291P,ENSG00000009709:ENST00000420770:exon6:c.A879G:p.P293P	NA	NA	1p36.13	Score=958;Name=V$IK2_01	NA	NA	NA	rs2743201	0.44	0.44	0.408	0.488618	0.2575	0.6042	0.3876	0.643	0.4703	0.26	0.57	0.38	0.62	0.3747	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.230863	NA	NA	0.261163	0.588516	ID=COSM1473185,COSM424864;OCCURENCE=1(breast)	0.377	NA	5.7733036
1075	12	125834095	125834095	C	A	exonic	TMEM132B	NA	synonymous SNV	TMEM132B:NM_052907:exon2:c.C150A:p.S50S	exonic	ENSG00000139364	NA	synonymous SNV	ENSG00000139364:ENST00000299308:exon2:c.C150A:p.S50S	Score=563;Name=lod=260	NA	12q24.31	NA	NA	NA	NA	rs1491893	0.27	0.27	0.246	0.274361	0.3012	0.2728	0.3458	0.1838	0.32	0.28	0.24	0.34	0.21	0.2979	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.015477	NA	NA	0.294451	0.203856	NA	0.239	NA	5.7731156
1075	2	130951548	130951548	G	A	exonic	TUBA3E	NA	synonymous SNV	TUBA3E:NM_207312:exon4:c.C867T:p.A289A	exonic	ENSG00000152086	NA	synonymous SNV	ENSG00000152086:ENST00000312988:exon4:c.C867T:p.A289A	Score=700;Name=lod=929	NA	2q21.1	NA	NA	NA	NA	rs1052319	0.8	0.8	0.9	NA	NA	NA	NA	NA	NA	0.83	0.91	0.83	0.61	0.8937	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.715023	NA	NA	NA	NA	NA	0.761	NA	5.7729666
1075	8	135614972	135614972	A	G	exonic	ZFAT	NA	synonymous SNV	ZFAT:NM_001174157:exon5:c.T804C:p.Y268Y,ZFAT:NM_001167583:exon6:c.T954C:p.Y318Y,ZFAT:NM_001174158:exon6:c.T954C:p.Y318Y,ZFAT:NM_020863:exon6:c.T990C:p.Y330Y,ZFAT:NM_001029939:exon7:c.T954C:p.Y318Y	exonic	ENSG00000066827	NA	synonymous SNV	ENSG00000066827:ENST00000523399:exon5:c.T804C:p.Y268Y,ENSG00000066827:ENST00000377838:exon6:c.T990C:p.Y330Y,ENSG00000066827:ENST00000429442:exon6:c.T954C:p.Y318Y,ENSG00000066827:ENST00000520214:exon6:c.T954C:p.Y318Y,ENSG00000066827:ENST00000520356:exon6:c.T954C:p.Y318Y,ENSG00000066827:ENST00000523243:exon6:c.T990C:p.Y330Y,ENSG00000066827:ENST00000520727:exon7:c.T954C:p.Y318Y	Score=461;Name=lod=100	NA	8q24.22	NA	NA	NA	NA	rs3739422	0.39	0.39	0.339	0.386581	0.2813	0.5476	0.3948	0.2859	0.4591	0.29	0.55	0.4	0.33	0.3397	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.06818	NA	NA	0.273201	0.248452	NA	0.232	NA	5.7724656
1075	4	62861941	62861941	G	C	intronic	LPHN3	NA	NA	NA	intronic	ENSG00000150471	NA	NA	NA	NA	NA	4q13.1	NA	Name=p300	Name=11	NA	rs17226398	0.27	0.27	0.274	0.247005	0.2276	0.3393	0.2248	0.2254	0.2168	0.24	0.32	0.25	0.26	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.140175	NA	NA	NA	NA	NA	0.174	NA	5.7724
1075	12	4735737	4735737	A	G	exonic	AKAP3	NA	synonymous SNV	AKAP3:NM_006422:exon4:c.T2331C:p.L777L	exonic	ENSG00000111254	NA	synonymous SNV	ENSG00000111254:ENST00000228850:exon4:c.T2331C:p.L777L,ENSG00000111254:ENST00000545990:exon5:c.T2331C:p.L777L	Score=567;Name=lod=270	NA	12p13.32	NA	NA	NA	NA	rs2072358	0.3	0.3	0.261	0.264177	0.3022	0.3621	0.3256	0.1475	0.2382	0.31	0.37	0.31	0.18	0.3005	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.555253	NA	NA	0.292791	0.160236	NA	0.341	NA	5.7711756
1075	14	64491695	64491695	T	C	exonic	SYNE2	NA	nonsynonymous SNV	SYNE2:NM_015180:exon40:c.T5906C:p.M1969T,SYNE2:NM_182914:exon40:c.T5906C:p.M1969T	exonic	ENSG00000054654	NA	nonsynonymous SNV	ENSG00000054654:ENST00000554584:exon39:c.T5906C:p.M1969T,ENSG00000054654:ENST00000344113:exon40:c.T5906C:p.M1969T,ENSG00000054654:ENST00000358025:exon40:c.T5906C:p.M1969T	NA	NA	14q23.2	NA	NA	NA	NA	rs4902264	0.72	0.72	0.673	0.678914	0.8757	0.7837	0.7824	0.3283	0.7689	0.87	0.8	0.78	0.34	0.8118	0.87	0.6	T	0.003	B	0.001	B	0.197	N	1.000	P	0.805	L	0.86	T	-0.993	T	0.000	T	0.128	-0.191	3.072	-1.29	0.068	0.119	3.203	-0.190917	NA	0.38	0.874694	0.444024	NA	0.681	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118541.1;CLNDSDB=.;CLNDSDBID=.	5.7711394
1075	2	173831934	173831934	C	T	intronic	RAPGEF4	NA	NA	NA	intronic	ENSG00000091428	NA	NA	NA	NA	NA	2q31.1	NA	Name=SP1,FOXA1_(C-20),p300,USF-1,BHLHE40,RXRA,FOXA1_(SC-101058)	Name=2	NA	rs16861098	0.18	0.18	0.176	0.162939	0.2296	0.1597	0.2233	0.053	0.2035	0.23	0.17	0.23	0.06	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.0963	NA	NA	NA	NA	NA	0.13	NA	5.7704
1075	12	94634187	94634187	T	C	intronic	PLXNC1	NA	NA	NA	intronic	ENSG00000136040	NA	NA	NA	NA	NA	12q22	NA	Name=TBP,NFKB,PAX5-N19,RFX5_(N-494),Pol2-4H8,EBF1_(C-8),BATF,Max,Oct-2,SMC3_(ab9263),PU.1,Pol2,BCL11A,POU2F2	Name=15	NA	rs66824619	0.2	0.2	0.177	0.178714	0.2306	0.0506	0.2262	0.2814	0.0849	0.24	0.07	0.22	0.26	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.166495	NA	NA	NA	NA	NA	0.203	NA	5.7694
1075	6	25727265	25727265	C	T	exonic	HIST1H2BA	NA	synonymous SNV	HIST1H2BA:NM_170610:exon1:c.C129T:p.I43I	exonic	ENSG00000146047	NA	synonymous SNV	ENSG00000146047:ENST00000274764:exon1:c.C129T:p.I43I	Score=543;Name=lod=214	NA	6p22.2	NA	NA	NA	NA	rs4712960	0.38	0.38	0.328	0.347045	0.2922	0.6825	0.4366	0.0976	0.3313	0.29	0.73	0.4	0.1	0.3273	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.948526	NA	NA	0.278023	0.137313	NA	0.283	NA	5.7691436
1075	6	25727334	25727334	C	T	exonic	HIST1H2BA	NA	synonymous SNV	HIST1H2BA:NM_170610:exon1:c.C198T:p.S66S	exonic	ENSG00000146047	NA	synonymous SNV	ENSG00000146047:ENST00000274764:exon1:c.C198T:p.S66S	Score=543;Name=lod=214	NA	6p22.2	NA	NA	NA	NA	rs4712961	0.38	0.38	0.33	0.347045	0.2922	0.6825	0.4366	0.0976	0.3313	0.29	0.73	0.4	0.1	0.3273	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.967043	NA	NA	0.278023	0.137313	NA	0.283	NA	5.7691436
1075	19	38935280	38935280	A	G	exonic	RYR1	NA	synonymous SNV	RYR1:NM_000540:exon7:c.A594G:p.L198L,RYR1:NM_001042723:exon7:c.A594G:p.L198L	exonic	ENSG00000196218	NA	synonymous SNV	ENSG00000196218:ENST00000355481:exon7:c.A594G:p.L198L,ENSG00000196218:ENST00000359596:exon7:c.A594G:p.L198L,ENSG00000196218:ENST00000360985:exon7:c.A594G:p.L198L	Score=614;Name=lod=417	NA	19q13.2	NA	NA	NA	NA	rs2229139	0.6	0.6	0.578	0.543331	0.6471	0.6121	0.6571	0.475	0.3773	0.64	0.62	0.67	0.48	0.6074	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.767605	NA	NA	0.643372	0.524285	NA	0.638	CLINSIG=non-pathogenic|untested;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|not;CLNACC=RCV000079154.1|RCV000119644.1;CLNDSDB=.|.;CLNDSDBID=.|.	5.7687946
1075	4	47408709	47408709	A	G	exonic	GABRB1	NA	synonymous SNV	GABRB1:NM_000812:exon8:c.A846G:p.T282T	exonic	ENSG00000163288	NA	synonymous SNV	ENSG00000163288:ENST00000538619:exon7:c.A636G:p.T212T,ENSG00000163288:ENST00000295454:exon8:c.A846G:p.T282T	NA	Name=Obesity-related traits	4p12	NA	NA	NA	NA	rs6289	0.22	0.22	0.228	0.209864	0.3062	0.0179	0.1873	0.3064	0.1943	0.31	0.03	0.22	0.31	0.2607	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.776605	NA	NA	0.331395	0.274626	NA	0.29	NA	5.7683716
1075	11	6502727	6502727	C	G	UTR5	TIMM10B	NM_012192:c.-20C>G	NA	NA	UTR5	ENSG00000132286,ENSG00000265264	ENST00000254616:c.-20C>G;ENST00000464330:c.-20C>G	NA	NA	NA	NA	11p15.4	NA	Name=Sin3Ak-20,Pol2-4H8,RFX5_(N-494),YY1,ELK4,JunD,FOSL2,TBP,IRF1,Nrf1,USF-1,PAX5-N19,SREBP2,PAX5-C20,SRF,c-Myc,CCNT2,NFKB,HEY1,BRCA1_(C-1863),YY1_(C-20),TR4,eGFP-JunD,E2F6,SP1,Mxi1_(bHLH),PU.1,Pol2,Pol2(phosphoS2),POU2F2,ZBTB33,HMGN3,GABP,E2F6_(H-50),SREBP1,TAF1,GATA-1,SP2_(SC-643),CHD2_(N-1250),GTF2F1_(RAP-74),Oct-2,Max,ELF1_(SC-631)	Name=148	NA	rs11604726	0.17	0.17	0.196	0.1877	0.1859	0.0327	0.1744	0.2852	0.227	0.19	0.04	0.15	0.29	0.1838	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.817532	NA	NA	0.195414	0.258973	NA	0.304	NA	5.7682194
1075	3	135774219	135774219	T	C	intronic	PPP2R3A	NA	NA	NA	ncRNA_exonic	ENSG00000227267	NA	NA	NA	Score=661;Name=lod=645	NA	3q22.3	NA	Name=NRSF	NA	NA	rs3946444	0.55	0.55	0.582	0.588858	0.5656	0.2262	0.4424	0.9569	0.593	0.57	0.25	0.47	0.94	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.030139	NA	NA	NA	NA	NA	0.652	NA	5.7677333
1075	6	25726675	25726675	G	A	exonic	HIST1H2AA	NA	synonymous SNV	HIST1H2AA:NM_170745:exon1:c.C81T:p.P27P	exonic	ENSG00000164508	NA	synonymous SNV	ENSG00000164508:ENST00000297012:exon1:c.C81T:p.P27P	NA	NA	6p22.2	NA	Name=CHD2_(N-1250),HEY1,Pol2-4H8,E2F6_(H-50)	NA	NA	rs9358871	0.38	0.38	0.325	0.346845	0.2922	0.6815	0.4366	0.0976	0.3313	0.29	0.73	0.4	0.1	0.3287	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.499635	NA	NA	0.27814	0.136859	NA	0.275	NA	5.7676266
1075	19	41712113	41712113	C	G	intronic	CYP2S1	NA	NA	NA	intronic	ENSG00000167600	NA	NA	NA	NA	NA	19q13.2	NA	Name=Rad21,CTCF	Name=22	NA	rs338584	0.28	0.28	0.278	0.282149	0.2326	0.1954	0.1801	0.528	0.1626	0.23	0.18	0.26	0.51	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.401946	NA	NA	NA	NA	NA	0.333	NA	5.7674
1075	13	75884216	75884216	C	T	exonic	TBC1D4	NA	nonsynonymous SNV	TBC1D4:NM_014832:exon14:c.G2455A:p.V819I	exonic	ENSG00000136111	NA	nonsynonymous SNV	ENSG00000136111:ENST00000413735:exon7:c.G802A:p.V268I,ENSG00000136111:ENST00000377625:exon12:c.G2266A:p.V756I,ENSG00000136111:ENST00000431480:exon13:c.G2431A:p.V811I,ENSG00000136111:ENST00000377636:exon14:c.G2455A:p.V819I,ENSG00000136111:ENST00000425511:exon14:c.G106A:p.V36I	NA	NA	13q22.2	NA	NA	NA	NA	rs1062087	0.72	0.72	0.721	0.711861	0.8579	0.7956	0.6643	0.3979	0.9335	0.86	0.79	0.69	0.45	0.8256	0.88	0.34	T	0.0	B	0.001	B	0.002	N	1.000	P	-1.245	N	4.09	T	-1.027	T	0.000	T	0.099	0.813	8.27	1.89	0.143	0.019	0.181	0.813047	NA	0.99	0.883732	0.504292	NA	0.819	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118589.2;CLNDSDB=.;CLNDSDBID=.	5.7661014
1075	1	228402047	228402047	A	G	exonic	OBSCN	NA	synonymous SNV	OBSCN:NM_001098623:exon4:c.A1431G:p.L477L,OBSCN:NM_001271223:exon4:c.A1431G:p.L477L,OBSCN:NM_052843:exon4:c.A1431G:p.L477L	exonic	ENSG00000154358	NA	synonymous SNV	ENSG00000154358:ENST00000284548:exon4:c.A1431G:p.L477L,ENSG00000154358:ENST00000422127:exon4:c.A1431G:p.L477L,ENSG00000154358:ENST00000570156:exon4:c.A1431G:p.L477L	Score=412;Name=lod=63	NA	1q42.13	NA	NA	Name=2	NA	rs1620111	0.7	0.7	0.713	0.719848	0.6372	0.8244	0.6427	0.6808	0.8047	0.64	0.83	0.62	0.72	0.6544	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.013686	NA	NA	0.609493	0.672123	ID=COSM1339494,COSM1339492,COSM1339493;OCCURENCE=1(large_intestine)	0.652	NA	5.7655736
1075	11	71276831	71276831	C	G	exonic	KRTAP5-10	NA	synonymous SNV	KRTAP5-10:NM_001012710:exon1:c.C198G:p.S66S	exonic	ENSG00000204572	NA	synonymous SNV	ENSG00000204572:ENST00000376536:exon1:c.C198G:p.S66S,ENSG00000204572:ENST00000398531:exon1:c.C198G:p.S66S	Score=355;Name=lod=37	NA	11q13.4	NA	NA	NA	NA	rs71473841	0.49	0.49	0.361	0.472045	0.4503	0.5754	0.5735	0.5008	0.2771	0.42	0.56	0.54	0.49	0.4513	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.351366	NA	NA	NA	NA	NA	0.319	NA	5.7650666
1076	17	33330150	33330150	A	C	UTR3	LIG3	NM_002311:c.*83A>C	NA	NA	UTR3	ENSG00000005156	ENST00000262327:c.*83A>C	NA	NA	NA	NA	17q12	NA	Name=Pol2	Name=49	NA	rs4796030	0.6	0.6	0.605	0.616014	0.5686	0.4603	0.4741	0.8933	0.5511	0.59	0.41	0.49	0.91	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.470208	NA	NA	NA	NA	NA	0.674	NA	5.7647334
1076	15	85452095	85452095	C	T	intronic	SLC28A1	NA	NA	NA	intronic	ENSG00000156222	NA	NA	NA	NA	NA	15q25.3	NA	Name=ZNF263	Name=6	NA	rs2305365	0.26	0.26	0.228	0.304313	0.2356	0.3075	0.3617	0.1755	0.5051	0.24	0.28	0.34	0.18	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.681688	NA	NA	NA	NA	NA	0.297	NA	5.7644
1076	6	25727517	25727517	G	A	exonic	HIST1H2BA	NA	synonymous SNV	HIST1H2BA:NM_170610:exon1:c.G381A:p.K127K	exonic	ENSG00000146047	NA	synonymous SNV	ENSG00000146047:ENST00000274764:exon1:c.G381A:p.K127K	Score=489;Name=lod=130	NA	6p22.2	NA	NA	NA	NA	rs9358872	0.38	0.38	0.338	0.347045	0.2922	0.6825	0.4366	0.0976	0.3313	0.29	0.73	0.4	0.1	0.3324	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.294687	NA	NA	0.277907	0.137313	NA	0.283	NA	5.7641596
1076	8	97172487	97172487	G	T	intronic	GDF6	NA	NA	NA	intronic	ENSG00000156466	NA	NA	NA	NA	NA	8q22.1	NA	Name=SUZ12	Name=61	NA	rs62516290	0.04	0.04	0.029	0.0307508	0.0845	NA	0.0562	0.0182	0.0061	0.08	NA	0.07	0.01	0.0623	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.260561	1.260561	NA	0.089884	0.029278	NA	0.065	NA	5.763316
1076	3	58154327	58154327	C	T	exonic	FLNB	NA	synonymous SNV	FLNB:NM_001164319:exon43:c.C7287T:p.S2429S,FLNB:NM_001164318:exon44:c.C7326T:p.S2442S,FLNB:NM_001457:exon44:c.C7359T:p.S2453S,FLNB:NM_001164317:exon45:c.C7452T:p.S2484S	exonic	ENSG00000136068	NA	synonymous SNV	ENSG00000136068:ENST00000493452:exon42:c.C6780T:p.S2260S,ENSG00000136068:ENST00000348383:exon43:c.C7236T:p.S2412S,ENSG00000136068:ENST00000358537:exon43:c.C7287T:p.S2429S,ENSG00000136068:ENST00000419752:exon43:c.C6819T:p.S2273S,ENSG00000136068:ENST00000295956:exon44:c.C7359T:p.S2453S,ENSG00000136068:ENST00000429972:exon44:c.C7326T:p.S2442S,ENSG00000136068:ENST00000490882:exon45:c.C7452T:p.S2484S	NA	NA	3p14.3	NA	Name=Pol2(b),TCF4	NA	NA	rs8640	0.53	0.53	0.531	0.571286	0.2664	0.9216	0.4597	0.5719	0.6022	0.27	0.91	0.41	0.55	0.3852	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.485507	NA	NA	0.251977	0.50227	NA	0.471	NA	5.7630896
1076	17	2185827	2185827	T	A	intronic	SMG6	NA	NA	NA	intronic	ENSG00000070366	NA	NA	NA	NA	NA	17p13.3	NA	Name=Rad21,CTCF,CEBPB,SMC3_(ab9263),CTCF_(C-20),p300_(N-15),JunD,CTCF_(SC-5916)	Name=138	NA	rs9899330	0.16	0.16	0.163	0.129593	0.2386	0.0327	0.1398	0.1619	0.0665	0.25	0.03	0.15	0.21	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.49722	NA	NA	NA	NA	NA	0.196	NA	5.7614
1076	3	133331230	133331230	C	T	intronic	TOPBP1	NA	NA	NA	intronic	ENSG00000163781	NA	NA	NA	Score=422;Name=lod=69	NA	3q22.1	Score=936;Name=V$AREB6_02	NA	NA	NA	rs71317417	0.07	0.07	0.078	0.066893	0.0865	0.0437	0.062	0.0946	0.0368	0.08	0.05	0.07	0.08	0.0677	0.085	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.783633	1.783633	NA	0.085091	0.078462	NA	0.094	NA	5.760709
1076	8	66525548	66525548	T	C	exonic	ARMC1	NA	synonymous SNV	ARMC1:NM_018120:exon4:c.A396G:p.Q132Q	exonic	ENSG00000104442	NA	synonymous SNV	ENSG00000104442:ENST00000276569:exon4:c.A396G:p.Q132Q,ENSG00000104442:ENST00000518908:exon4:c.A396G:p.Q132Q	Score=718;Name=lod=1101	NA	8q13.1	NA	NA	NA	NA	rs11559265	0.29	0.29	0.267	0.25619	0.3002	0.379	0.3228	0.0877	0.2648	0.29	0.45	0.32	0.1	0.2921	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.139501	NA	NA	0.313721	0.123014	NA	0.261	NA	5.7606456
1076	19	5692311	5692311	G	C	intronic	LONP1	NA	NA	NA	intronic	ENSG00000196365	NA	NA	NA	NA	NA	19p13.3	NA	Name=Pol2(b),Ini1,Pol2-4H8	Name=129	NA	rs3818815	0.19	0.19	0.178	0.178514	0.2396	0.0903	0.2536	0.1929	0.1339	0.22	0.09	0.23	0.21	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.272006	NA	NA	NA	NA	NA	0.225	NA	5.7604
1076	5	149499672	149499672	T	C	exonic	PDGFRB	NA	synonymous SNV	PDGFRB:NM_002609:exon19:c.A2601G:p.L867L	exonic	ENSG00000113721	NA	synonymous SNV	ENSG00000113721:ENST00000261799:exon19:c.A2601G:p.L867L	Score=478;Name=lod=117	NA	5q32	NA	NA	NA	NA	rs246395	0.23	0.23	0.215	0.236422	0.2903	0.1538	0.2997	0.1528	0.3344	0.3	0.15	0.29	0.16	0.2871	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.082033	NA	NA	0.329419	0.186564	ID=COSM149995;OCCURENCE=1(stomach)	0.217	NA	5.7598476
1076	17	44344988	44344988	C	G	intergenic	KANSL1,LRRC37A	dist=42248;dist=27509	NA	NA	ncRNA_intronic	ENSG00000261575	NA	NA	NA	NA	NA	17q21.31	NA	Name=FOXA1_(C-20),ZEB1_(SC-25388)	Name=148	NA	rs2732650	0.12	0.12	0.144	0.0866613	0.2406	0.001	0.1556	0.0159	0.0634	0.23	0.0035	0.19	0.02	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.241801	NA	NA	NA	NA	NA	0.109	NA	5.7594
1076	12	7043486	7043486	C	T	intronic	ATN1	NA	NA	NA	intronic	ENSG00000111676	NA	NA	NA	Score=507;Name=lod=153	NA	12p13.31	NA	NA	Name=62	NA	rs2071075	0.15	0.15	0.148	0.13778	0.0835	0.4296	0.0375	0.003	0.1462	0.08	0.44	0.04	0.002	0.0906	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.984974	1.984974	NA	0.06686	0.016341	NA	0.167	NA	5.75904
1076	19	22235307	22235307	C	G	UTR5	ZNF257	NM_033468:c.-128C>G	NA	NA	UTR5	ENSG00000197134	ENST00000435820:c.-128C>G,ENST00000597927:c.-35474C>G,ENST00000594363:c.-128C>G,ENST00000594947:c.-128C>G	NA	NA	NA	NA	19p12	NA	Name=c-Fos,HEY1,TBP,NF-YA,TAF1,Pol2,NF-YB,ELF1_(SC-631)	Name=99	NA	rs415291	0.56	0.56	0.512	0.497804	0.5746	0.5456	0.6297	0.4584	0.3292	0.59	0.58	0.57	0.48	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.708472	NA	NA	NA	NA	NA	0.536	NA	5.7587334
1076	19	33584479	33584479	G	A	intronic	GPATCH1	NA	NA	NA	intronic	ENSG00000076650	NA	NA	NA	NA	NA	19q13.11	NA	Name=eGFP-GATA2,eGFP-JunD	Name=2	NA	rs12460195	0.44	0.44	0.461	0.533347	0.2416	0.5089	0.2867	0.8003	0.6728	0.25	0.5	0.3	0.78	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.089575	NA	NA	NA	NA	NA	0.449	NA	5.7584
1076	1	12854530	12854530	C	G	exonic	PRAMEF1	NA	nonsynonymous SNV	PRAMEF1:NM_023013:exon3:c.C754G:p.Q252E	exonic	ENSG00000116721	NA	nonsynonymous SNV	ENSG00000116721:ENST00000332296:exon3:c.C754G:p.Q252E	NA	NA	1p36.21	NA	NA	NA	NA	rs1063776	0.87	0.87	0.88	0.867212	0.8638	0.7986	0.8919	0.9259	0.8446	0.87	0.8	0.89	0.92	0.8553	0.92	1	T	0.0	B	0.001	B	0.560	N	1.000	P	-0.275	N	5.57	T	-1.000	T	0.000	T	0.087	-2.798	0	-0.476	-1.065	-3.001	.	-2.797543	NA	1	0.856013	0.905583	NA	0.029	NA	5.7582204
1076	17	79163649	79163649	G	A	intronic	AZI1	NA	NA	NA	exonic	ENSG00000141577	NA	unknown	UNKNOWN	NA	NA	17q25.3	NA	Name=SMC3_(ab9263),Rad21,CTCF,CTCF_(SC-5916)	Name=22	NA	rs2292182	0.17	0.17	0.159	0.202276	0.2406	0.1925	0.147	0.0552	0.411	0.24	0.17	0.17	0.07	0.2438	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.057024	NA	NA	0.257558	0.090331	NA	0.123	NA	5.758042
1076	3	156695609	156695609	T	A	intronic	LEKR1	NA	NA	NA	ncRNA_exonic	ENSG00000241879	NA	NA	NA	Score=690;Name=lod=851	NA	3q25.31	NA	NA	Name=2	NA	rs1384538	0.56	0.56	0.516	0.536941	0.5755	0.744	0.6412	0.2337	0.6196	0.56	0.73	0.67	0.27	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.984354	NA	NA	NA	NA	NA	0.522	NA	5.7578333
1076	22	17662793	17662793	A	G	exonic	CECR1	NA	synonymous SNV	CECR1:NM_177405:exon6:c.T636C:p.Y212Y,CECR1:NM_017424:exon8:c.T1359C:p.Y453Y	exonic	ENSG00000093072	NA	synonymous SNV	ENSG00000093072:ENST00000330232:exon6:c.T636C:p.Y212Y,ENSG00000093072:ENST00000262607:exon8:c.T1359C:p.Y453Y,ENSG00000093072:ENST00000399837:exon9:c.T1359C:p.Y453Y,ENSG00000093072:ENST00000399839:exon9:c.T1359C:p.Y453Y,ENSG00000093072:ENST00000449907:exon9:c.T1233C:p.Y411Y	Score=522;Name=lod=177	NA	22q11.1	NA	NA	NA	NA	rs7289170	0.22	0.22	0.224	0.191893	0.3211	0.0456	0.2003	0.239	0.1401	0.32	0.04	0.24	0.24	0.2565	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.133972	NA	NA	0.332442	0.242851	NA	0.181	NA	5.7566246
1076	11	36453506	36453506	T	C	intronic	PRR5L	NA	NA	NA	intronic	ENSG00000135362	NA	NA	NA	Score=309;Name=lod=24	NA	11p12	NA	Name=Pol2,SMC3_(ab9263),TCF4,eGFP-JunD,USF2,CTCF,p300,FOSL1_(SC-183),GR,Rad21,c-Jun,c-Fos,Pol2-4H8,FOSL2,p300_(N-15),USF-1,eGFP-FOS	Name=123	NA	rs746761	0.49	0.49	0.49	0.522963	0.4125	0.6181	0.4135	0.5885	0.5276	0.41	0.62	0.38	0.57	0.4389	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.142183	NA	NA	0.392973	0.550636	NA	0.428	NA	5.755627
1076	10	33484577	33484577	C	T	intronic	NRP1	NA	NA	NA	intronic	ENSG00000099250	NA	NA	NA	NA	NA	10p11.22	NA	Name=c-Fos,JunD,USF-1,p300	Name=84	NA	rs2474724	0.36	0.36	0.355	0.338858	0.2445	0.6399	0.1974	0.239	0.3609	0.23	0.72	0.21	0.25	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.275347	1.275347	NA	NA	NA	NA	0.254	NA	5.7555
1076	17	79936986	79936986	T	C	intronic	ASPSCR1	NA	NA	NA	intronic	ENSG00000169696	NA	NA	NA	NA	NA	17q25.3	NA	Name=MafK_(ab50322),USF-1,HNF4A_(H-171),RXRA,BHLHE40,MafF_(M8194),MafK_(SC-477),Pol2,TCF4	Name=2	NA	rs55671960	0.13	0.13	0.111	0.100839	0.2445	0.0149	0.1239	0.0401	0.1074	0.25	0.01	0.16	0.04	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.246115	NA	NA	NA	NA	NA	0.152	NA	5.7555
1076	17	35346641	35346641	T	C	exonic	AATF	NA	synonymous SNV	AATF:NM_012138:exon7:c.T1245C:p.S415S	exonic	ENSG00000108270	NA	synonymous SNV	ENSG00000108270:ENST00000589579:exon2:c.T159C:p.S53S,ENSG00000108270:ENST00000225402:exon7:c.T1245C:p.S415S	Score=605;Name=lod=384	NA	17q12	NA	NA	NA	NA	rs1045056	0.18	0.18	0.186	0.156749	0.3419	0.0357	0.1542	0.0628	0.2198	0.35	0.04	0.19	0.08	0.2519	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.092574	NA	NA	0.317791	0.096232	NA	0.283	NA	5.7550756
1076	1	35654765	35654765	G	A	intronic	SFPQ	NA	NA	NA	intronic	ENSG00000116560	NA	NA	NA	NA	NA	1p34.3	NA	Name=Pol2-4H8,HEY1	Name=4	NA	rs2088481	0.39	0.39	0.378	0.39397	0.0427	0.6677	0.3963	0.6188	0.1677	0.04	0.69	0.31	0.62	0.1774	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.827822	NA	NA	0.024884	0.538584	NA	0.268	NA	5.755016
1077	9	127951863	127951863	G	A	exonic	PPP6C	NA	synonymous SNV	PPP6C:NM_001123355:exon1:c.C135T:p.F45F	exonic	ENSG00000119414	NA	synonymous SNV	ENSG00000119414:ENST00000451402:exon1:c.C135T:p.F45F	NA	NA	9q33.3	NA	Name=Pol2,YY1_(C-20),YY1,Pol2-4H8,HA-E2F1,TBP	NA	NA	rs466994	0.45	0.45	0.408	0.455072	0.4513	0.5417	0.3473	0.4682	0.4284	0.42	0.55	0.38	0.42	0.4605	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.576902	NA	NA	NA	NA	ID=COSM455349;OCCURENCE=1(breast)	0.442	NA	5.7548666
1077	11	47303275	47303275	T	C	exonic	MADD	NA	synonymous SNV	MADD:NM_001135943:exon8:c.T1440C:p.N480N,MADD:NM_001135944:exon8:c.T1440C:p.N480N,MADD:NM_003682:exon8:c.T1440C:p.N480N,MADD:NM_130470:exon8:c.T1440C:p.N480N,MADD:NM_130471:exon8:c.T1440C:p.N480N,MADD:NM_130472:exon8:c.T1440C:p.N480N,MADD:NM_130473:exon8:c.T1440C:p.N480N,MADD:NM_130474:exon8:c.T1440C:p.N480N,MADD:NM_130475:exon8:c.T1440C:p.N480N,MADD:NM_130476:exon8:c.T1440C:p.N480N	exonic	ENSG00000110514	NA	synonymous SNV	ENSG00000110514:ENST00000311027:exon8:c.T1440C:p.N480N,ENSG00000110514:ENST00000342922:exon8:c.T1440C:p.N480N,ENSG00000110514:ENST00000349238:exon8:c.T1440C:p.N480N,ENSG00000110514:ENST00000395336:exon8:c.T1440C:p.N480N,ENSG00000110514:ENST00000395344:exon8:c.T1440C:p.N480N,ENSG00000110514:ENST00000402192:exon8:c.T1440C:p.N480N,ENSG00000110514:ENST00000402799:exon8:c.T1440C:p.N480N,ENSG00000110514:ENST00000406482:exon8:c.T1440C:p.N480N,ENSG00000110514:ENST00000407859:exon8:c.T1440C:p.N480N	Score=576;Name=lod=293	NA	11p11.2	NA	NA	NA	NA	rs326217	0.31	0.31	0.272	0.296126	0.3042	0.252	0.4352	0.2481	0.2996	0.3	0.28	0.38	0.3	0.3014	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.008258	NA	NA	0.306538	0.242163	NA	0.449	NA	5.7545286
1077	4	70047486	70047486	C	T	intergenic	UGT2B7,UGT2B11	dist=68781;dist=18565	NA	NA	ncRNA_exonic	ENSG00000196472	NA	NA	NA	Score=395;Name=lod=54	NA	4q13.2	NA	Name=FOXA1_(C-20)	NA	NA	rs79124684	0.32	0.32	0.249	0.342252	0.2455	0.4692	0.2795	0.3336	0.3671	0.23	0.48	0.26	0.32	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.682043	1.682043	NA	NA	NA	NA	0.014	NA	5.7545
1077	1	38411445	38411445	G	A	exonic	INPP5B	NA	synonymous SNV	INPP5B:NM_005540:exon3:c.C135T:p.H45H	exonic	ENSG00000204084	NA	synonymous SNV	ENSG00000204084:ENST00000373021:exon2:c.C135T:p.H45H,ENSG00000204084:ENST00000373026:exon2:c.C135T:p.H45H,ENSG00000204084:ENST00000373023:exon3:c.C135T:p.H45H,ENSG00000204084:ENST00000373024:exon3:c.C135T:p.H45H	NA	NA	1p34.3	NA	Name=ZBTB7A_(SC-34508),HMGN3	NA	NA	rs871524	0.24	0.24	0.22	0.201877	0.3181	0.2401	0.2262	0.0431	0.2403	0.34	0.27	0.23	0.05	0.2858	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.487886	NA	NA	0.308701	0.084456	NA	0.319	NA	5.7540656
1077	10	117486910	117486910	T	G	intronic	ATRNL1	NA	NA	NA	intronic	ENSG00000107518	NA	NA	NA	Score=595;Name=lod=348	NA	10q25.3	NA	Name=GATA-2	Name=2	NA	rs2286631	0.47	0.47	0.444	0.460264	0.3966	0.7768	0.572	0.1558	0.5317	0.43	0.77	0.51	0.17	0.4604	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.732971	3.732971	NA	0.38907	0.212438	NA	0.442	NA	5.75393
1077	1	35654777	35654777	G	A	intronic	SFPQ	NA	NA	NA	intronic	ENSG00000116560	NA	NA	NA	NA	NA	1p34.3	NA	Name=Pol2-4H8,HEY1	Name=4	NA	rs2088482	0.39	0.39	0.388	0.398163	0.0427	0.6677	0.3991	0.6331	0.1677	0.04	0.69	0.31	0.63	0.1785	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.108462	NA	NA	0.024884	0.54857	NA	0.268	NA	5.753916
1077	12	55806134	55806134	T	C	intergenic	OR6C65,OR6C76	dist=10883;dist=13904	NA	NA	ncRNA_exonic	ENSG00000179899	NA	NA	NA	NA	NA	12q13.2	NA	Name=TAL1_(SC-12984),Egr-1,USF-1,GATA2_(CG2-96)	Name=2	NA	rs12833263	0.2	0.2	0.175	0.214058	0.2465	0.1081	0.2435	0.1861	0.3067	0.26	0.09	0.24	0.2	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.342539	NA	0.34	NA	NA	NA	0.21	NA	5.7535
1077	8	73848139	73848139	A	T	intronic	KCNB2	NA	NA	NA	intronic	ENSG00000182674	NA	NA	NA	NA	NA	8q13.3	NA	Name=MafK_(ab50322),MafK_(SC-477)	Name=2	NA	rs3735829	0.29	0.29	0.253	0.304712	0.0417	0.7907	0.3112	0.1089	0.3344	0.04	0.8	0.25	0.11	0.1667	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.899701	2.899701	NA	0.038256	0.091466	NA	0.174	NA	5.753344
1077	7	64030116	64030116	C	T	intergenic	ZNF680,LOC100128885	dist=6611;dist=4957	NA	NA	ncRNA_exonic	ENSG00000213642	NA	NA	NA	Score=467;Name=lod=105	NA	7q11.21	NA	Name=CTCF	NA	NA	rs1446886	0.21	0.21	0.183	0.21905	0.2475	0.0833	0.2219	0.2209	0.3252	0.27	0.09	0.23	0.24	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.426682	NA	NA	NA	NA	NA	0.167	NA	5.7525
1077	3	10413715	10413715	G	A	exonic	ATP2B2	NA	synonymous SNV	ATP2B2:NM_001683:exon9:c.C1302T:p.N434N,ATP2B2:NM_001001331:exon12:c.C1437T:p.N479N	exonic	ENSG00000157087	NA	synonymous SNV	ENSG00000157087:ENST00000452124:exon8:c.C1005T:p.N335N,ENSG00000157087:ENST00000383800:exon9:c.C1302T:p.N434N,ENSG00000157087:ENST00000460129:exon9:c.C1302T:p.N434N,ENSG00000157087:ENST00000343816:exon11:c.C1395T:p.N465N,ENSG00000157087:ENST00000352432:exon11:c.C1437T:p.N479N,ENSG00000157087:ENST00000397077:exon11:c.C1302T:p.N434N,ENSG00000157087:ENST00000360273:exon12:c.C1437T:p.N479N	Score=542;Name=lod=212	NA	3p25.3	NA	NA	NA	NA	rs2289274	0.25	0.25	0.205	0.276957	0.3002	0.3323	0.3256	0.1324	0.3569	0.29	0.28	0.31	0.12	0.3052	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.067886	NA	NA	0.308837	0.15842	ID=COSM149337;OCCURENCE=1(stomach)	0.377	NA	5.7524296
1077	8	8234077	8234077	G	C	exonic	SGK223	NA	synonymous SNV	SGK223:NM_001080826:exon2:c.C1842G:p.A614A	exonic	ENSG00000182319	NA	synonymous SNV	ENSG00000182319:ENST00000330777:exon2:c.C1842G:p.A614A,ENSG00000182319:ENST00000520004:exon3:c.C1842G:p.A614A	NA	NA	8p23.1	NA	Name=Pol2,MafK_(ab50322)	NA	NA	rs4840952	0.41	0.41	0.408	0.425719	0.2783	0.6409	0.4222	0.3064	0.5194	0.27	0.68	0.38	0.33	0.3621	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.181762	NA	NA	0.274626	0.289501	NA	0.355	NA	5.7516406
1077	1	242223171	242223171	G	A	intergenic	MAP1LC3C,PLD5	dist=60786;dist=28518	NA	NA	ncRNA_exonic	ENSG00000224625	NA	NA	NA	Score=841;Name=lod=3496	NA	1q43	NA	Name=YY1_(C-20)	NA	NA	rs908969	0.24	0.24	0.249	0.229633	0.2485	0.25	0.2752	0.2163	0.1748	0.23	0.25	0.26	0.23	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.05201	NA	NA	NA	NA	NA	0.217	NA	5.7515
1077	6	29069264	29069264	T	C	intergenic	OR2B3,OR2J3	dist=14174;dist=10404	NA	NA	exonic	ENSG00000204702	NA	nonsynonymous SNV	ENSG00000204702:ENST00000377171:exon1:c.T545C:p.V182A	NA	NA	6p22.1	NA	NA	NA	NA	rs2394516	0.39	0.39	0.352	0.336861	0.5815	0.3512	0.4323	0.0454	0.3967	0.61	0.35	0.44	0.05	0.5008	0.61	0.02	D	.	.	.	.	.	.	1.000	P	.	.	1.16	T	-1.069	T	0.055	T	0.38	1.787	11.93	1.16	0.164	-0.305	6.865	1.787085	1.787085	0.03	NA	NA	NA	0.304	NA	5.7510334
1077	12	41337435	41337435	C	T	exonic	CNTN1	NA	synonymous SNV	CNTN1:NM_175038:exon11:c.C1383T:p.N461N,CNTN1:NM_001256063:exon13:c.C1416T:p.N472N,CNTN1:NM_001256064:exon13:c.C1416T:p.N472N,CNTN1:NM_001843:exon13:c.C1416T:p.N472N	exonic	ENSG00000018236	NA	synonymous SNV	ENSG00000018236:ENST00000348761:exon11:c.C1383T:p.N461N,ENSG00000018236:ENST00000347616:exon12:c.C1416T:p.N472N,ENSG00000018236:ENST00000360099:exon12:c.C1416T:p.N472N,ENSG00000018236:ENST00000547702:exon13:c.C1416T:p.N472N,ENSG00000018236:ENST00000547849:exon13:c.C1416T:p.N472N,ENSG00000018236:ENST00000551295:exon13:c.C1416T:p.N472N	Score=455;Name=lod=94	NA	12q12	NA	NA	NA	NA	rs1056019	0.58	0.58	0.571	0.571486	0.6571	0.4365	0.6628	0.5862	0.5378	0.66	0.44	0.66	0.58	0.6193	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.320637	NA	NA	0.639567	0.586473	ID=COSM431076;OCCURENCE=1(breast)	0.645	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116765.1;CLNDSDB=.;CLNDSDBID=.	5.7506996
1077	2	127826533	127826533	A	G	exonic	BIN1	NA	synonymous SNV	BIN1:NM_004305:exon6:c.T486C:p.T162T,BIN1:NM_139343:exon6:c.T486C:p.T162T,BIN1:NM_139344:exon6:c.T486C:p.T162T,BIN1:NM_139345:exon6:c.T486C:p.T162T,BIN1:NM_139346:exon6:c.T486C:p.T162T,BIN1:NM_139347:exon6:c.T486C:p.T162T,BIN1:NM_139348:exon6:c.T486C:p.T162T,BIN1:NM_139349:exon6:c.T486C:p.T162T,BIN1:NM_139350:exon6:c.T486C:p.T162T,BIN1:NM_139351:exon6:c.T486C:p.T162T	exonic	ENSG00000136717	NA	synonymous SNV	ENSG00000136717:ENST00000259238:exon6:c.T486C:p.T162T,ENSG00000136717:ENST00000316724:exon6:c.T486C:p.T162T,ENSG00000136717:ENST00000346226:exon6:c.T486C:p.T162T,ENSG00000136717:ENST00000348750:exon6:c.T486C:p.T162T,ENSG00000136717:ENST00000351659:exon6:c.T486C:p.T162T,ENSG00000136717:ENST00000352848:exon6:c.T486C:p.T162T,ENSG00000136717:ENST00000357970:exon6:c.T486C:p.T162T,ENSG00000136717:ENST00000376113:exon6:c.T486C:p.T162T,ENSG00000136717:ENST00000393040:exon6:c.T486C:p.T162T,ENSG00000136717:ENST00000393041:exon6:c.T486C:p.T162T,ENSG00000136717:ENST00000409400:exon6:c.T486C:p.T162T	NA	NA	2q14.3	Score=820;Name=V$MEIS1AHOXA9_01	NA	NA	NA	rs1060743	0.33	0.33	0.263	0.354633	0.2913	0.4534	0.366	0.2443	0.4591	0.3	0.42	0.39	0.24	0.3344	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.739044	NA	NA	0.290465	0.235361	NA	0.304	NA	5.7505016
1077	10	96997670	96997670	A	G	UTR3	PDLIM1	NM_020992:c.*12T>C	NA	NA	UTR3	ENSG00000107438	ENST00000329399:c.*12T>C	NA	NA	NA	NA	10q23.33	NA	Name=GR	Name=43	NA	rs1049921	0.17	0.17	0.15	0.172724	0.1779	0.0754	0.255	0.2057	0.1646	0.19	0.08	0.2	0.22	0.2023	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.091233	NA	NA	0.202674	0.186337	NA	0.21	NA	5.7504594
1077	14	24846961	24846961	G	T	UTR3	NFATC4	NM_001136022:c.*812G>T,NM_001198967:c.*50G>T,NM_001198965:c.*50G>T,NM_004554:c.*50G>T,NM_001198966:c.*50G>T	NA	NA	UTR3	ENSG00000100968	ENST00000413692:c.*812G>T,ENST00000554591:c.*50G>T,ENST00000424781:c.*812G>T,ENST00000539237:c.*812G>T,ENST00000554050:c.*50G>T,ENST00000250373:c.*50G>T,ENST00000553708:c.*812G>T,ENST00000422617:c.*812G>T,ENST00000557451:c.*812G>T,ENST00000555453:c.*50G>T,ENST00000555167:c.*812G>T,ENST00000556759:c.*50G>T,ENST00000555802:c.*50G>T,ENST00000555393:c.*812G>T	NA	NA	NA	NA	14q12	NA	Name=USF-1,ELF1_(SC-631)	Name=22	NA	rs10362	0.19	0.19	0.158	0.181909	0.1829	0.1518	0.3617	0.0658	0.2413	0.2	0.16	0.31	0.09	0.2054	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.914313	NA	NA	0.195116	0.092374	NA	0.123	NA	5.7499174
1077	2	170929880	170929880	G	A	intronic	UBR3	NA	NA	NA	intronic	ENSG00000144357	NA	NA	NA	NA	NA	2q31.1	NA	Name=GATA-2	Name=105	NA	rs10202446	0.32	0.32	0.298	0.340256	0.2505	0.4256	0.2378	0.3162	0.4499	0.26	0.41	0.26	0.34	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.005221	NA	NA	NA	NA	NA	0.239	NA	5.7495
1077	3	45718327	45718327	T	G	intronic	LIMD1	NA	NA	NA	intronic	ENSG00000144791	NA	NA	NA	NA	NA	3p21.31	NA	Name=CTCF	Name=20	NA	rs7640969	0.35	0.35	0.315	0.392572	0.2505	0.5198	0.3833	0.2799	0.5665	0.23	0.57	0.38	0.27	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.299374	NA	NA	NA	NA	NA	0.246	NA	5.7495
1077	6	29759996	29759996	T	C	exonic	LOC554223	NA	nonsynonymous SNV	LOC554223:NM_001207043:exon1:c.T212C:p.F71S	ncRNA_exonic	ENSG00000176998,ENSG00000181126	NA	NA	NA	NA	NA	6p22.1	NA	Name=Pol2,RFX5_(N-494),YY1_(C-20)	NA	NA	rs1610645	0.36	0.36	0.368	0.397364	0.3111	0.1954	0.3703	0.5991	0.4407	0.31	0.24	0.36	0.57	0.4403	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.301421	NA	NA	NA	NA	NA	0.37	NA	5.7486
1077	1	197480927	197480927	C	T	exonic	DENND1B	NA	synonymous SNV	DENND1B:NM_001195215:exon22:c.G1746A:p.Q582Q	exonic	ENSG00000213047	NA	synonymous SNV	ENSG00000213047:ENST00000391979:exon8:c.G666A:p.Q222Q	Score=504;Name=lod=149	NA	1q31.3	NA	NA	NA	NA	rs12142127	0.24	0.24	0.232	0.229633	0.3062	0.2212	0.2622	0.1415	0.2556	0.3	0.19	0.28	0.15	0.2739	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.771767	NA	NA	0.338372	0.165456	NA	0.203	NA	5.7481946
1077	10	99350128	99350128	A	G	exonic	C10orf62	NA	synonymous SNV	C10orf62:NM_001009997:exon1:c.A474G:p.L158L	exonic	ENSG00000203942	NA	synonymous SNV	ENSG00000203942:ENST00000370640:exon1:c.A474G:p.L158L	Score=300;Name=lod=22	NA	10q24.2	NA	NA	NA	NA	rs7093643	0.27	0.27	0.25	0.277955	0.3091	0.1369	0.2968	0.3548	0.274	0.3	0.12	0.26	0.39	0.2936	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.112662	NA	NA	0.315814	0.365638	ID=COSM1350194;OCCURENCE=1(large_intestine)	0.217	NA	5.7481526
1077	22	39134715	39134715	T	C	exonic	SUN2	NA	synonymous SNV	SUN2:NM_001199579:exon16:c.A1887G:p.Q629Q,SUN2:NM_015374:exon16:c.A1824G:p.Q608Q,SUN2:NM_001199580:exon17:c.A1824G:p.Q608Q	exonic	ENSG00000100242	NA	synonymous SNV	ENSG00000100242:ENST00000455125:exon3:c.A243G:p.Q81Q,ENSG00000100242:ENST00000216064:exon16:c.A1824G:p.Q608Q,ENSG00000100242:ENST00000405018:exon16:c.A1887G:p.Q629Q,ENSG00000100242:ENST00000411587:exon16:c.A1791G:p.Q597Q,ENSG00000100242:ENST00000405510:exon17:c.A1824G:p.Q608Q,ENSG00000100242:ENST00000406622:exon17:c.A1824G:p.Q608Q	Score=552;Name=lod=233	NA	22q13.1	NA	NA	NA	NA	rs1062687	0.39	0.39	0.42	0.383986	0.2982	0.4603	0.2046	0.556	0.2883	0.31	0.5	0.23	0.53	0.3223	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.398918	2.398918	0	0.298256	0.512483	NA	0.391	NA	5.7479106
1077	19	57984918	57984918	A	G	exonic	ZNF772	NA	synonymous SNV	ZNF772:NM_001144068:exon4:c.T1071C:p.S357S,ZNF772:NM_001024596:exon5:c.T1194C:p.S398S	exonic	ENSG00000197128	NA	synonymous SNV	ENSG00000197128:ENST00000427512:exon2:c.T858C:p.S286S,ENSG00000197128:ENST00000356584:exon4:c.T1071C:p.S357S,ENSG00000197128:ENST00000343280:exon5:c.T1194C:p.S398S	NA	NA	19q13.43	NA	Name=SETDB1	NA	NA	rs2074058	0.4	0.4	0.384	0.413938	0.2783	0.5893	0.4524	0.3154	0.4785	0.3	0.64	0.38	0.31	0.3563	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.784621	NA	NA	0.284419	0.309578	NA	0.326	NA	5.7476476
1077	11	64124515	64124515	T	C	exonic	CCDC88B	NA	synonymous SNV	CCDC88B:NM_032251:exon27:c.T4380C:p.P1460P	exonic	ENSG00000168071	NA	nonsynonymous SNV	ENSG00000168071:ENST00000359902:exon14:c.T1694C:p.L565P	NA	NA	11q13.1	NA	NA	NA	NA	rs612448	0.28	0.28	0.233	0.260184	0.4334	0.1845	0.4107	0.0303	0.364	0.45	0.18	0.39	0.04	0.3843	0.45	.	.	0.0	B	0.0	B	.	.	1.000	P	.	.	0.37	T	-0.918	T	0.000	T	.	1.546	11.12	0.573	0.007	-0.393	3.362	1.545644	1.545644	0.04	0.434955	0.096774	NA	0.225	NA	5.747345
1077	5	74063268	74063268	G	T	intronic	NSA2	NA	NA	NA	intronic	ENSG00000164346	NA	NA	NA	NA	NA	5q13.3	NA	Name=Pol2,KAP1,GATA-1	Name=84	NA	rs79669494	0.14	0.14	0.136	0.140176	0.1382	0.0208	0.1196	0.2867	0.0818	0.11	0.02	0.14	0.31	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.046342	NA	NA	0.11461	0.269899	NA	0.225	NA	5.74719
1077	11	35201810	35201810	T	C	intronic	CD44	NA	NA	NA	intronic	ENSG00000026508	NA	NA	NA	NA	NA	11p13	NA	Name=Pol2-4H8	Name=3	NA	rs11033019	0.07	0.07	0.066	0.0585064	0.0865	0.001	0.0418	0.1165	0.0225	0.09	0.0017	0.06	0.13	0.0742	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.632069	NA	NA	0.092252	0.09832	NA	0.072	NA	5.747048
1077	8	17919031	17919031	C	T	intronic	ASAH1	NA	NA	NA	intronic	ENSG00000104763	NA	NA	NA	NA	NA	8p22	NA	Name=GABP,ELF1_(SC-631),Pol2-4H8,HNF4A_(H-171)	Name=2	NA	rs61108931	0.24	0.24	0.217	0.247204	0.2535	0.3056	0.3127	0.0673	0.3773	0.26	0.3	0.33	0.09	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.110149	NA	NA	NA	NA	NA	0.196	NA	5.7465
1077	5	74063250	74063250	T	C	intronic	NSA2	NA	NA	NA	intronic	ENSG00000164346	NA	NA	NA	NA	NA	5q13.3	NA	Name=GABP,GATA-1,KAP1,Pol2	Name=84	NA	rs116165962	0.11	0.11	0.108	0.108227	0.1372	0.0208	0.1066	0.1732	0.0818	0.11	0.02	0.12	0.18	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.837833	NA	NA	0.116593	0.184249	NA	0.138	NA	5.746207
1077	6	62442604	62442604	A	G	exonic	KHDRBS2	NA	synonymous SNV	KHDRBS2:NM_152688:exon7:c.T876C:p.Y292Y	exonic	ENSG00000112232	NA	synonymous SNV	ENSG00000112232:ENST00000281156:exon7:c.T876C:p.Y292Y	Score=493;Name=lod=134	NA	6q11.1	NA	NA	NA	NA	rs10484690	0.39	0.39	0.407	0.390775	0.2813	0.3046	0.3242	0.6218	0.3272	0.27	0.34	0.35	0.67	0.3326	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.816173	NA	NA	0.306628	0.569905	NA	0.362	NA	5.7461386
1077	12	104092996	104092996	T	C	exonic	STAB2	NA	synonymous SNV	STAB2:NM_017564:exon34:c.T3705C:p.H1235H	exonic	ENSG00000136011	NA	synonymous SNV	ENSG00000136011:ENST00000388887:exon34:c.T3705C:p.H1235H	NA	NA	12q23.3	Score=714;Name=V$HOX13_01	NA	NA	NA	rs697210	0.35	0.35	0.343	0.353834	0.3121	0.37	0.3804	0.4168	0.2761	0.29	0.38	0.34	0.4	0.3122	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.111335	NA	NA	0.296279	0.392419	NA	0.297	NA	5.7460876
1077	1	29542637	29542637	A	G	exonic	MECR	NA	nonsynonymous SNV	MECR:NM_001024732:exon3:c.T58C:p.F20L,MECR:NM_016011:exon3:c.T286C:p.F96L	exonic	ENSG00000116353	NA	nonsynonymous SNV	ENSG00000116353:ENST00000263702:exon3:c.T286C:p.F96L,ENSG00000116353:ENST00000373791:exon3:c.T58C:p.F20L	Score=524;Name=lod=179	NA	1p35.3	NA	NA	NA	NA	rs1128400	0.74	0.74	0.735	0.718051	0.8797	0.5625	0.7334	0.7231	0.6943	0.88	0.54	0.77	0.73	0.8168	0.89	0.65	T	0.0	B	0.0	B	0.000	N	1.000	P	-0.38	N	1.01	T	-1.017	T	0.000	T	0.016	0.16	4.859	1.39	0.052	0.287	4.877	0.159742	NA	0.44	0.891395	0.765774	NA	0.732	NA	5.7454384
1077	5	153432970	153432970	C	T	exonic	MFAP3	NA	synonymous SNV	MFAP3:NM_001135037:exon2:c.C348T:p.D116D,MFAP3:NM_001242336:exon3:c.C786T:p.D262D,MFAP3:NM_005927:exon3:c.C786T:p.D262D	exonic	ENSG00000037749	NA	synonymous SNV	ENSG00000037749:ENST00000439768:exon2:c.C348T:p.D116D,ENSG00000037749:ENST00000322602:exon3:c.C786T:p.D262D,ENSG00000037749:ENST00000436816:exon3:c.C786T:p.D262D	Score=589;Name=lod=330	NA	5q33.2	Score=891;Name=V$RORA1_01	NA	NA	NA	rs2255493	0.71	0.71	0.697	0.715855	0.6252	0.8581	0.7161	0.6241	0.7863	0.64	0.87	0.67	0.64	0.6742	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.53544	NA	NA	0.621977	0.648888	NA	0.674	NA	5.7452896
1077	15	35045057	35045057	G	A	exonic	GJD2	NA	synonymous SNV	GJD2:NM_020660:exon2:c.C588T:p.S196S	exonic	ENSG00000159248	NA	synonymous SNV	ENSG00000159248:ENST00000290374:exon2:c.C588T:p.S196S	Score=737;Name=lod=1313	NA	15q14	NA	NA	NA	NA	rs3743123	0.29	0.29	0.301	0.308906	0.2922	0.255	0.3184	0.2897	0.4008	0.29	0.28	0.32	0.27	0.3207	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.397962	NA	NA	0.308632	0.308042	NA	0.319	NA	5.7451346
1078	5	153432733	153432733	T	C	exonic	MFAP3	NA	synonymous SNV	MFAP3:NM_001135037:exon2:c.T111C:p.A37A,MFAP3:NM_001242336:exon3:c.T549C:p.A183A,MFAP3:NM_005927:exon3:c.T549C:p.A183A	exonic	ENSG00000037749	NA	synonymous SNV	ENSG00000037749:ENST00000439768:exon2:c.T111C:p.A37A,ENSG00000037749:ENST00000322602:exon3:c.T549C:p.A183A,ENSG00000037749:ENST00000436816:exon3:c.T549C:p.A183A	Score=541;Name=lod=210	NA	5q33.2	Score=906;Name=V$CDPCR3HD_01	NA	NA	NA	rs2578386	0.71	0.71	0.689	0.715256	0.6252	0.8581	0.7161	0.6218	0.7863	0.64	0.87	0.67	0.64	0.6745	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.049561	NA	NA	0.621977	0.648207	NA	0.674	NA	5.7449896
1078	1	205630893	205630893	A	G	intronic	SLC45A3	NA	NA	NA	intronic	ENSG00000158715	NA	NA	NA	NA	NA	1q32.1	NA	Name=GATA-2	Name=13	NA	rs3761916	0.32	0.32	0.327	0.347444	0.2555	0.4504	0.4438	0.1884	0.4826	0.26	0.47	0.41	0.19	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.264262	NA	NA	NA	NA	NA	0.283	NA	5.7445
1078	19	4431896	4431896	C	T	intronic	CHAF1A	NA	NA	NA	intronic	ENSG00000167670	NA	NA	NA	NA	NA	19p13.3	NA	Name=EBF1_(C-8)	Name=10	NA	rs243371	0.4	0.4	0.376	0.396565	0.2555	0.6002	0.415	0.3457	0.3875	0.26	0.61	0.41	0.36	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.480302	NA	NA	NA	NA	NA	0.283	NA	5.7445
1078	3	42251329	42251329	C	T	exonic	TRAK1	NA	synonymous SNV	TRAK1:NM_001265609:exon13:c.C1593T:p.P531P,TRAK1:NM_014965:exon13:c.C1641T:p.P547P,TRAK1:NM_001042646:exon14:c.C1815T:p.P605P,TRAK1:NM_001265608:exon14:c.C1815T:p.P605P	exonic	ENSG00000182606	NA	synonymous SNV	ENSG00000182606:ENST00000341421:exon13:c.C1641T:p.P547P,ENSG00000182606:ENST00000396175:exon13:c.C1641T:p.P547P,ENSG00000182606:ENST00000327628:exon14:c.C1815T:p.P605P	NA	NA	3p22.1	Score=811;Name=V$HNF4_01	NA	NA	NA	rs2290133	0.36	0.36	0.325	0.361621	0.2793	0.4663	0.5346	0.2428	0.3763	0.28	0.49	0.51	0.25	0.3394	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.821832	NA	NA	0.303605	0.257376	NA	0.239	NA	5.7443616
1078	2	223084833	223084833	C	T	intronic	PAX3	NA	NA	NA	intronic	ENSG00000135903	NA	NA	NA	Score=659;Name=lod=635	NA	2q36.1	NA	NA	Name=2	NA	rs13022712	0.06	0.06	0.042	0.0758786	0.0736	0.0188	0.1931	0.0038	0.1513	0.08	0.01	0.17	0.01	0.1038	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.883172	3.883172	NA	0.078372	0.019065	NA	0.072	NA	5.744228
1078	1	201926403	201926403	T	G	intronic	TIMM17A	NA	NA	NA	intronic	ENSG00000134375	NA	NA	NA	NA	NA	1q32.1	Score=784;Name=V$MEF2_02	NA	Name=4	NA	rs61821487	0.06	0.06	0.054	0.0611022	0.0855	0.0377	0.0793	0.034	0.0838	0.08	0.04	0.08	0.03	0.0796	0.091	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.699538	NA	NA	0.091395	0.046527	NA	0.138	NA	5.743505
1078	6	42672407	42672407	T	C	intronic	PRPH2	NA	NA	NA	intronic	ENSG00000112619	NA	NA	NA	NA	NA	6p21.1	NA	Name=HEY1,Pol2-4H8,TAF7_(SQ-8),Pol2	Name=55	NA	rs3818087	0.28	0.28	0.227	0.266973	0.2565	0.4673	0.3242	0.1331	0.2117	0.25	0.44	0.32	0.14	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.202557	NA	NA	NA	NA	NA	0.297	NA	5.7435
1078	14	20818602	20818602	C	G	intronic	PARP2	NA	NA	NA	intronic	ENSG00000129484	NA	NA	NA	NA	NA	14q11.2	NA	Name=GATA-2,c-Fos,c-Jun	Name=20	NA	rs3093902	0.18	0.18	0.154	0.20607	0.2565	0.1835	0.2003	0.0446	0.3998	0.25	0.18	0.2	0.06	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.079309	NA	NA	NA	NA	NA	0.196	NA	5.7435
1078	14	20819112	20819112	T	A	intronic	PARP2	NA	NA	NA	intronic	ENSG00000129484	NA	NA	NA	NA	NA	14q11.2	NA	Name=CTCF,Rad21	Name=38	NA	rs3093904	0.18	0.18	0.148	0.20607	0.2565	0.1835	0.2003	0.0446	0.3998	0.25	0.18	0.2	0.06	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.02003	NA	NA	NA	NA	NA	0.196	NA	5.7435
1078	4	79284694	79284694	C	T	exonic	FRAS1	NA	nonsynonymous SNV	FRAS1:NM_001166133:exon21:c.C2450T:p.A817V,FRAS1:NM_025074:exon21:c.C2450T:p.A817V	exonic	ENSG00000138759	NA	nonsynonymous SNV	ENSG00000138759:ENST00000264895:exon21:c.C2450T:p.A817V,ENSG00000138759:ENST00000325942:exon21:c.C2450T:p.A817V	NA	NA	4q21.21	NA	NA	NA	NA	rs6835769	0.36	0.36	0.304	0.335463	0.5557	0.2004	0.5562	0.1278	0.3722	0.56	0.21	0.55	0.09	0.487	0.56	1	T	0.0	B	0.002	B	0.563	N	1.000	P	-0.485	N	1.62	T	-0.940	T	0.000	T	0.023	-1.071	0.172	0.556	0.138	-0.088	8.503	-1.070942	NA	0.97	0.548091	0.188235	NA	0.42	NA	5.7425424
1078	17	78797066	78797066	T	A	intronic	RPTOR	NA	NA	NA	UTR3	ENSG00000141564	ENST00000570891:c.*39T>A	NA	NA	NA	NA	17q25.3	NA	Name=Max,c-Myc,HA-E2F1,ZNF263,Egr-1	Name=38	NA	rs2019040	0.14	0.14	0.144	0.112819	0.1461	0.2302	0.0908	0.0265	0.09	0.15	0.25	0.1	0.04	0.133	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.659815	NA	NA	0.145233	0.041534	NA	0.072	NA	5.7423337
1078	19	14578813	14578813	T	G	intronic	PKN1	NA	NA	NA	intronic	ENSG00000123143	NA	NA	NA	NA	NA	19p13.12	NA	Name=Rad21,CTCF,SMC3_(ab9263),CTCF_(C-20),JunD	Name=11	NA	rs10416904	0.17	0.17	0.172	0.195088	0.0775	0.1062	0.1643	0.4728	0.0542	0.07	0.12	0.14	0.39	0.115	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.19203	NA	NA	0.065281	0.395373	NA	0.217	NA	5.742219
1078	22	38369976	38369976	A	G	exonic	SOX10	NA	synonymous SNV	SOX10:NM_006941:exon4:c.T927C:p.H309H	exonic	ENSG00000100146	NA	synonymous SNV	ENSG00000100146:ENST00000396884:exon4:c.T927C:p.H309H,ENSG00000100146:ENST00000360880:exon5:c.T927C:p.H309H	Score=588;Name=lod=327	NA	22q13.1	Score=922;Name=V$USF_Q6	NA	NA	NA	rs139884	0.71	0.71	0.7	0.713259	0.6372	0.748	0.6499	0.8548	0.6094	0.63	0.75	0.62	0.87	0.6537	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.781736	NA	NA	0.633837	0.816841	NA	0.703	NA	5.7419296
1078	1	118242719	118242719	A	G	intergenic	FAM46C,GDAP2	dist=71708;dist=163388	NA	NA	ncRNA_exonic	ENSG00000270719	NA	NA	NA	NA	NA	1p12	NA	Name=CEBPB	Name=4	NA	rs4575073	0.25	0.25	0.237	0.246206	0.2584	0.4008	0.3631	0.0333	0.2791	0.25	0.39	0.33	0.03	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.184671	NA	NA	NA	NA	NA	0.152	NA	5.7416
1078	3	156877357	156877357	T	C	intronic	CCNL1	NA	NA	NA	intronic	ENSG00000163660	NA	NA	NA	NA	NA	3q25.31	NA	Name=CTCF_(C-20),ELF1_(SC-631),NFKB,ZEB1_(SC-25388),TCF12,CTCF,GABP,TAF1,E2F1,Pol2-4H8,YY1_(C-20),HA-E2F1,YY1,Pol2(phosphoS2),Egr-1,Pol2,PU.1	Name=111	NA	rs10936061	0.27	0.27	0.213	0.241813	0.2584	0.3333	0.4784	0.0787	0.183	0.25	0.36	0.43	0.08	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.601513	2.601513	NA	NA	NA	NA	0.167	NA	5.7416
1078	7	7949295	7949295	C	T	intergenic	LOC729852,GLCCI1	dist=30444;dist=59079	NA	NA	ncRNA_exonic	ENSG00000214998	NA	NA	NA	Score=629;Name=lod=481	NA	7p21.3	NA	NA	Name=32	NA	rs61741163	0.12	0.12	0.119	0.0876597	0.2584	0.002	0.1052	0.0121	0.09	0.26	0.0017	0.12	0.03	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.489946	NA	NA	NA	NA	NA	0.181	NA	5.7416
1078	2	48602252	48602252	C	T	exonic	FOXN2	NA	synonymous SNV	FOXN2:NM_002158:exon7:c.C966T:p.S322S	exonic	ENSG00000170802	NA	synonymous SNV	ENSG00000170802:ENST00000340553:exon7:c.C966T:p.S322S	Score=505;Name=lod=150	NA	2p16.3	NA	NA	NA	NA	rs17855177	0.29	0.29	0.28	0.255591	0.3101	0.4603	0.2104	0.1218	0.2014	0.31	0.44	0.25	0.12	0.2927	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.898763	NA	NA	0.322674	0.15842	NA	0.174	NA	5.7411926
1078	14	106134510	106134510	G	C	intergenic	TMEM121,ELK2AP	dist=137971;dist=1404	NA	NA	ncRNA_intronic	ENSG00000253755	NA	NA	NA	NA	NA	14q32.33	NA	Name=Pol2	Name=5	NA	rs10144438	NA	NA	0.106	0.255591	0.2594	0.5258	0.2248	0.0446	0.2802	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.217931	NA	NA	NA	NA	NA	NA	NA	5.7406
1078	18	12076451	12076451	C	A	intergenic	IMPA2,ANKRD62	dist=45566;dist=17397	NA	NA	ncRNA_exonic	ENSG00000256616	NA	NA	NA	Score=778;Name=lod=1937	NA	18p11.21	NA	NA	Name=69	NA	rs28395459	0.43	0.43	0.429	0.435304	0.2594	0.5734	0.3775	0.5825	0.316	0.26	0.57	0.39	0.57	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.832685	NA	NA	NA	NA	NA	0.384	NA	5.7406
1078	21	33355760	33355760	G	A	intronic	HUNK	NA	NA	NA	intronic	ENSG00000142149	NA	NA	NA	NA	NA	21q22.11	NA	Name=CEBPB	Name=7	NA	rs737103	0.38	0.38	0.395	0.365216	0.2594	0.4464	0.3732	0.4433	0.2791	0.24	0.46	0.44	0.44	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.921062	NA	NA	NA	NA	ID=COSN166637;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.29	NA	5.7406
1078	1	214575122	214575122	T	C	intronic	PTPN14	NA	NA	NA	intronic	ENSG00000152104	NA	NA	NA	NA	NA	1q41	NA	Name=STAT3	Name=47	NA	rs17022807	0.1	0.1	0.094	0.124201	0.0835	0.1706	0.0548	0.1127	0.183	0.08	0.15	0.06	0.1	0.095	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.786983	1.786983	NA	0.08093	0.08965	NA	0.087	NA	5.74057
1078	22	19951897	19951897	G	C	intronic	COMT	NA	NA	NA	exonic	ENSG00000093010	NA	nonsynonymous SNV	ENSG00000093010:ENST00000403184:exon5:c.G690C:p.K230N	NA	NA	22q11.21	NA	NA	NA	NA	rs4646315	0.17	0.17	0.126	0.174521	0.1869	0.123	0.2219	0.1241	0.2495	0.19	0.11	0.22	0.15	0.2397	0.22	.	.	0.001	B	0.0	B	.	.	1.000	P	.	.	-0.5	T	-1.081	T	0.000	T	0.078	1.133	9.617	-1.95	-0.236	0.783	8.635	1.132749	NA	0.03	NA	NA	NA	0.268	NA	5.7400667
1078	1	146523897	146523897	G	T	intergenic	LOC728989,PRKAB2	dist=9298;dist=102788	NA	NA	ncRNA_exonic	ENSG00000225603	NA	NA	NA	Score=736;Name=lod=1309	NA	1q21.1	NA	Name=PU.1	NA	NA	rs12124149	0.14	0.14	0.146	0.114617	0.2604	0.0268	0.1354	0.0832	0.0828	0.27	0.02	0.17	0.07	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.123144	NA	NA	NA	NA	NA	0.159	NA	5.7396
1078	3	186443018	186443018	T	C	exonic	KNG1	NA	nonsynonymous SNV	KNG1:NM_000893:exon4:c.T533C:p.M178T,KNG1:NM_001102416:exon4:c.T533C:p.M178T,KNG1:NM_001166451:exon4:c.T533C:p.M178T	exonic	ENSG00000113889	NA	nonsynonymous SNV	ENSG00000113889:ENST00000265023:exon4:c.T533C:p.M178T,ENSG00000113889:ENST00000287611:exon4:c.T533C:p.M178T,ENSG00000113889:ENST00000447445:exon4:c.T533C:p.M178T	NA	NA	3q27.3	NA	NA	NA	NA	rs1656922	0.5	0.5	0.492	0.524161	0.5368	0.3562	0.611	0.615	0.5	0.53	0.33	0.61	0.58	0.5373	0.61	0.62	T	0.0	B	0.0	B	0.447	N	1.000	P	-0.205	N	1.77	T	-0.934	T	0.000	T	0.015	-1.328	0.032	-0.388	-0.128	-0.072	0.989	-1.327636	NA	0.91	0.519767	0.596459	ID=COSM149539,COSM149540;OCCURENCE=1(stomach)	0.623	NA	5.7394664
1078	2	96952833	96952833	A	G	exonic	SNRNP200	NA	synonymous SNV	SNRNP200:NM_014014:exon27:c.T3550C:p.L1184L	exonic	ENSG00000144028	NA	synonymous SNV	ENSG00000144028:ENST00000323853:exon27:c.T3550C:p.L1184L	Score=495;Name=lod=137	NA	2q11.2	NA	NA	NA	NA	rs3171927	0.2	0.2	0.214	0.284145	0.2972	0.2153	0.2421	0.0416	0.6994	0.29	0.19	0.25	0.05	0.319	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.954004	NA	NA	0.312442	0.085792	ID=COSM148903;OCCURENCE=1(stomach)	0.145	NA	5.7380246
1078	17	1673405	1673405	G	A	intronic	SERPINF1	NA	NA	NA	intronic	ENSG00000132386	NA	NA	NA	NA	NA	17p13.3	NA	Name=FOXA2_(SC-6554),FOXA1_(SC-101058),RXRA,TCF4,Pol2,FOXA1_(C-20),HDAC2_(SC-6296),ZNF263	Name=42	NA	rs12603825	0.31	0.31	0.289	0.300519	0.2624	0.246	0.3386	0.4107	0.2198	0.23	0.27	0.35	0.44	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.426281	NA	NA	NA	NA	NA	0.355	NA	5.7376
1078	2	108999786	108999786	T	C	intronic	SULT1C4	NA	NA	NA	intronic	ENSG00000198075	NA	NA	NA	NA	NA	2q12.3	NA	Name=CTCF	Name=29	NA	rs4149436	0.37	0.37	0.413	0.437899	0.2644	0.1081	0.1888	0.9463	0.4458	0.26	0.11	0.21	0.96	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.234582	NA	NA	NA	NA	NA	0.514	NA	5.7356
1078	5	38338761	38338761	C	T	intronic	EGFLAM	NA	NA	NA	intronic	ENSG00000164318	NA	NA	NA	NA	NA	5p13.2	NA	Name=USF2,HNF4A_(H-171),TCF4,HNF4G_(SC-6558),USF-1,BHLHE40,CEBPB	Name=9	NA	rs17339367	0.07	0.07	0.064	0.0728834	0.0964	0.0923	0.0533	0.0121	0.1247	0.08	0.1	0.06	0.01	0.0819	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.428442	NA	NA	0.086163	0.031548	NA	0.036	NA	5.735537
1079	10	85972043	85972043	A	G	exonic	CDHR1	NA	synonymous SNV	CDHR1:NM_001171971:exon15:c.A1662G:p.E554E,CDHR1:NM_033100:exon15:c.A1662G:p.E554E	exonic	ENSG00000148600	NA	synonymous SNV	ENSG00000148600:ENST00000440770:exon8:c.A774G:p.E258E,ENSG00000148600:ENST00000332904:exon15:c.A1662G:p.E554E,ENSG00000148600:ENST00000372117:exon15:c.A1662G:p.E554E	Score=551;Name=lod=232	NA	10q23.1	NA	NA	NA	NA	rs10749482	0.4	0.4	0.406	0.429113	0.2853	0.2619	0.3876	0.7542	0.3395	0.3	0.27	0.34	0.77	0.3557	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.186771	NA	NA	0.291047	0.666818	NA	0.428	NA	5.7346196
1079	12	92924753	92924753	C	T	intergenic	CLLU1,C12orf74	dist=100023;dist=171866	NA	NA	ncRNA_exonic	ENSG00000258262	NA	NA	NA	Score=389;Name=lod=51	NA	12q22	NA	NA	Name=2	NA	rs11614879	0.2	0.2	0.158	0.16893	0.2654	0.1835	0.2925	0.0673	0.1043	0.27	0.16	0.26	0.09	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.645434	NA	NA	NA	NA	NA	0.145	NA	5.7346
1079	16	68857441	68857441	T	C	exonic	CDH1	NA	synonymous SNV	CDH1:NM_004360:exon13:c.T2076C:p.A692A	exonic	ENSG00000039068	NA	synonymous SNV	ENSG00000039068:ENST00000422392:exon12:c.T1893C:p.A631A,ENSG00000039068:ENST00000261769:exon13:c.T2076C:p.A692A	NA	NA	16q22.1	NA	Name=TCF12	Name=97	NA	rs1801552	0.69	0.69	0.714	0.71865	0.6451	0.6448	0.585	0.938	0.6687	0.64	0.62	0.59	0.93	0.6548	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.285663	NA	NA	0.632209	0.880346	NA	0.667	NA	5.7345576
1079	4	155459194	155459194	A	T	exonic	PLRG1	NA	synonymous SNV	PLRG1:NM_001201564:exon13:c.T1191A:p.I397I,PLRG1:NM_002669:exon13:c.T1218A:p.I406I	exonic	ENSG00000171566	NA	synonymous SNV	ENSG00000171566:ENST00000503251:exon2:c.T147A:p.I49I,ENSG00000171566:ENST00000302078:exon13:c.T1191A:p.I397I,ENSG00000171566:ENST00000393905:exon13:c.T1218A:p.I406I,ENSG00000171566:ENST00000499023:exon13:c.T1218A:p.I406I	Score=671;Name=lod=713	NA	4q31.3	NA	NA	NA	NA	rs7668818	0.21	0.21	0.19	0.230631	0.325	0.1438	0.1888	0.1498	0.362	0.3	0.13	0.21	0.14	0.2793	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.370244	1.370244	NA	0.328238	0.176364	NA	0.217	NA	5.7341286
1079	1	26887592	26887592	T	C	exonic	RPS6KA1	NA	synonymous SNV	RPS6KA1:NM_001006665:exon15:c.T1425C:p.Y475Y,RPS6KA1:NM_002953:exon16:c.T1398C:p.Y466Y	exonic	ENSG00000117676	NA	synonymous SNV	ENSG00000117676:ENST00000403732:exon3:c.T246C:p.Y82Y,ENSG00000117676:ENST00000374162:exon15:c.T1122C:p.Y374Y,ENSG00000117676:ENST00000530003:exon15:c.T1350C:p.Y450Y,ENSG00000117676:ENST00000531382:exon15:c.T1425C:p.Y475Y,ENSG00000117676:ENST00000374166:exon16:c.T1365C:p.Y455Y,ENSG00000117676:ENST00000374168:exon16:c.T1398C:p.Y466Y,ENSG00000117676:ENST00000526792:exon16:c.T1122C:p.Y374Y	NA	NA	1p36.11	Score=725;Name=V$NRSF_01	NA	NA	NA	rs1064196	0.47	0.47	0.469	0.510383	0.2903	0.756	0.3646	0.5068	0.592	0.29	0.74	0.35	0.5	0.3793	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.091899	NA	NA	0.26314	0.462324	NA	0.384	NA	5.7339266
1079	12	114377885	114377885	G	C	exonic	RBM19	NA	synonymous SNV	RBM19:NM_001146698:exon15:c.C1818G:p.T606T,RBM19:NM_001146699:exon15:c.C1818G:p.T606T,RBM19:NM_016196:exon15:c.C1818G:p.T606T	exonic	ENSG00000122965	NA	synonymous SNV	ENSG00000122965:ENST00000261741:exon15:c.C1818G:p.T606T,ENSG00000122965:ENST00000392561:exon15:c.C1818G:p.T606T,ENSG00000122965:ENST00000545145:exon15:c.C1818G:p.T606T	Score=420;Name=lod=68	NA	12q24.21	NA	NA	NA	NA	rs2290790	0.21	0.21	0.205	0.219449	0.3191	0.1756	0.2565	0.0688	0.3395	0.31	0.15	0.3	0.08	0.2861	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.619324	NA	NA	0.328488	0.106446	NA	0.181	NA	5.7329786
1079	22	37387461	37387461	C	T	intronic	TEX33	NA	NA	NA	intronic	ENSG00000185264	NA	NA	NA	NA	NA	22q12.3	NA	Name=CTCF	Name=17	NA	rs6000523	0.23	0.23	0.191	0.241014	0.2674	0.0883	0.353	0.2844	0.2331	0.25	0.07	0.37	0.27	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.050511	NA	NA	NA	NA	NA	0.217	NA	5.7326
1079	17	72943126	72943126	G	A	exonic	OTOP3	NA	synonymous SNV	OTOP3:NM_001272005:exon6:c.G1122A:p.A374A,OTOP3:NM_178233:exon6:c.G1176A:p.A392A	exonic	ENSG00000182938	NA	synonymous SNV	ENSG00000182938:ENST00000328801:exon6:c.G1176A:p.A392A	NA	NA	17q25.1	Score=794;Name=V$AHRARNT_02	NA	NA	NA	rs8066909	0.32	0.32	NA	0.290735	0.5109	0.0655	0.4885	0.1672	0.3231	0.52	0.08	0.48	0.16	0.4232	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.510521	NA	NA	NA	NA	ID=COSM437353;OCCURENCE=1(breast)	0.362	NA	5.7325666
1079	9	84205860	84205860	G	A	exonic	TLE1	NA	synonymous SNV	TLE1:NM_005077:exon16:c.C1689T:p.T563T	exonic	ENSG00000196781	NA	synonymous SNV	ENSG00000196781:ENST00000376499:exon16:c.C1689T:p.T563T	Score=383;Name=lod=48	NA	9q21.32	NA	NA	NA	NA	rs8782	0.2	0.2	0.172	0.173922	0.333	0.0387	0.2075	0.1475	0.1616	0.32	0.05	0.24	0.15	0.2552	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.18449	NA	NA	0.346163	0.169995	NA	0.203	NA	5.7323036
1079	16	2115481	2115481	C	T	intronic	TSC2	NA	NA	NA	intronic	ENSG00000103197	NA	NA	NA	NA	NA	16p13.3	NA	NA	Name=19	NA	rs45477195	0.05	0.05	0.041	0.0393371	0.1004	NA	0.0735	0.0182	0.0215	0.1	NA	0.07	0.01	0.0712	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.401727	NA	NA	0.096628	0.029345	NA	0.138	CLINSIG=untested;CLNDBN=Tuberous_sclerosis_syndrome;CLNREVSTAT=not;CLNACC=RCV000042958.2;CLNDSDB=GeneReviews:MedGen:OMIM:SNOMED_CT;CLNDSDBID=NBK1220:C0041341:191100:7199000	5.731772
1079	2	71795152	71795152	A	T	exonic	DYSF	NA	synonymous SNV	DYSF:NM_001130976:exon24:c.A2541T:p.S847S,DYSF:NM_001130977:exon24:c.A2541T:p.S847S,DYSF:NM_001130984:exon24:c.A2544T:p.S848S,DYSF:NM_001130986:exon24:c.A2544T:p.S848S,DYSF:NM_001130455:exon25:c.A2586T:p.S862S,DYSF:NM_001130978:exon25:c.A2583T:p.S861S,DYSF:NM_001130980:exon25:c.A2634T:p.S878S,DYSF:NM_001130981:exon25:c.A2634T:p.S878S,DYSF:NM_001130983:exon25:c.A2586T:p.S862S,DYSF:NM_001130985:exon25:c.A2637T:p.S879S,DYSF:NM_001130987:exon25:c.A2637T:p.S879S,DYSF:NM_003494:exon25:c.A2583T:p.S861S,DYSF:NM_001130979:exon26:c.A2676T:p.S892S,DYSF:NM_001130982:exon26:c.A2679T:p.S893S	exonic	ENSG00000135636	NA	synonymous SNV	ENSG00000135636:ENST00000409744:exon24:c.A2544T:p.S848S,ENSG00000135636:ENST00000258104:exon25:c.A2583T:p.S861S,ENSG00000135636:ENST00000394120:exon25:c.A2586T:p.S862S,ENSG00000135636:ENST00000409366:exon25:c.A2586T:p.S862S,ENSG00000135636:ENST00000409582:exon25:c.A2634T:p.S878S,ENSG00000135636:ENST00000409762:exon25:c.A2634T:p.S878S,ENSG00000135636:ENST00000410020:exon25:c.A2637T:p.S879S,ENSG00000135636:ENST00000410041:exon25:c.A2637T:p.S879S,ENSG00000135636:ENST00000429174:exon25:c.A2583T:p.S861S,ENSG00000135636:ENST00000409651:exon26:c.A2679T:p.S893S,ENSG00000135636:ENST00000413539:exon26:c.A2676T:p.S892S	Score=542;Name=lod=213	NA	2p13.2	NA	NA	NA	NA	rs2288355	0.55	0.55	0.58	0.550519	0.663	0.1925	0.5634	0.8147	0.4376	0.66	0.14	0.57	0.87	0.6042	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.525491	1.525491	NA	0.668837	0.80867	NA	0.674	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000080254.3;CLNDSDB=.;CLNDSDBID=.	5.7306296
1079	19	38798086	38798086	T	C	exonic	YIF1B	NA	synonymous SNV	YIF1B:NM_033557:exon6:c.A678G:p.V226V,YIF1B:NM_001039671:exon7:c.A726G:p.V242V,YIF1B:NM_001039672:exon7:c.A771G:p.V257V,YIF1B:NM_001039673:exon7:c.A762G:p.V254V,YIF1B:NM_001145461:exon7:c.A720G:p.V240V,YIF1B:NM_001145462:exon7:c.A678G:p.V226V,YIF1B:NM_001145463:exon7:c.A762G:p.V254V	exonic	ENSG00000167645	NA	synonymous SNV	ENSG00000167645:ENST00000592246:exon5:c.A573G:p.V191V,ENSG00000167645:ENST00000392124:exon6:c.A678G:p.V226V,ENSG00000167645:ENST00000329420:exon7:c.A726G:p.V242V,ENSG00000167645:ENST00000337679:exon7:c.A762G:p.V254V,ENSG00000167645:ENST00000339413:exon7:c.A771G:p.V257V,ENSG00000167645:ENST00000591755:exon7:c.A762G:p.V254V,ENSG00000167645:ENST00000591784:exon7:c.A678G:p.V226V,ENSG00000167645:ENST00000592694:exon7:c.A678G:p.V226V	NA	NA	19q13.2	NA	Name=Pol2	NA	NA	rs3178327	0.38	0.38	0.327	0.374601	0.326	0.5823	0.4712	0.1581	0.4346	0.32	0.59	0.42	0.17	0.3348	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.083634	NA	NA	0.27593	0.185883	NA	0.246	NA	5.7299366
1079	14	22636776	22636776	G	C	intergenic	OR4E2,DAD1	dist=502538;dist=397031	NA	NA	exonic	ENSG00000259092	NA	nonsynonymous SNV	ENSG00000259092:ENST00000557168:exon2:c.G229C:p.G77R	NA	NA	14q11.2	Score=824;Name=V$EVI1_04	NA	NA	NA	rs34544774	0.06	0.06	0.061	0.0567093	0.0408	NA	0.0331	0.1452	0.0286	0.03	NA	0.04	0.17	0.033	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.664218	NA	0.71	0.029898	0.107047	NA	NA	NA	5.7296354
1079	5	169504743	169504743	T	C	exonic	DOCK2	NA	synonymous SNV	DOCK2:NM_004946:exon48:c.T4896C:p.R1632R	exonic	ENSG00000134516	NA	synonymous SNV	ENSG00000134516:ENST00000520908:exon34:c.T3372C:p.R1124R,ENSG00000134516:ENST00000540750:exon34:c.T2079C:p.R693R,ENSG00000134516:ENST00000256935:exon48:c.T4896C:p.R1632R	NA	NA	5q35.1	Score=892;Name=V$CP2_01	NA	NA	NA	rs1045168	0.28	0.28	0.271	0.291134	0.334	0.1071	0.2579	0.3782	0.3425	0.34	0.1	0.3	0.38	0.2949	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.396754	1.396754	NA	0.30814	0.376759	ID=COSM150014;OCCURENCE=1(stomach)	0.275	NA	5.7296266
1079	14	53130507	53130507	T	C	intronic	ERO1L	NA	NA	NA	exonic	ENSG00000197930	NA	nonsynonymous SNV	ENSG00000197930:ENST00000554019:exon8:c.A688G:p.I230V,ENSG00000197930:ENST00000556039:exon8:c.A688G:p.I230V	Score=376;Name=lod=45	NA	14q22.1	NA	NA	Name=2	NA	rs17125636	0.42	0.42	0.406	0.38099	0.503	0.4137	0.4914	0.1944	0.3957	0.51	0.44	0.5	0.21	0.4532	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.083226	NA	NA	0.481395	0.240345	NA	0.377	NA	5.7290717
1079	11	126277216	126277216	C	T	exonic	ST3GAL4	NA	synonymous SNV	ST3GAL4:NM_001254759:exon3:c.C249T:p.Y83Y,ST3GAL4:NM_001254757:exon5:c.C252T:p.Y84Y,ST3GAL4:NM_001254758:exon5:c.C252T:p.Y84Y,ST3GAL4:NM_006278:exon5:c.C240T:p.Y80Y	exonic	ENSG00000110080	NA	synonymous SNV	ENSG00000110080:ENST00000532243:exon3:c.C249T:p.Y83Y,ENSG00000110080:ENST00000534457:exon3:c.C237T:p.Y79Y,ENSG00000110080:ENST00000449406:exon4:c.C219T:p.Y73Y,ENSG00000110080:ENST00000526727:exon4:c.C252T:p.Y84Y,ENSG00000110080:ENST00000227495:exon5:c.C240T:p.Y80Y,ENSG00000110080:ENST00000356132:exon5:c.C270T:p.Y90Y,ENSG00000110080:ENST00000392669:exon5:c.C252T:p.Y84Y,ENSG00000110080:ENST00000444328:exon5:c.C252T:p.Y84Y,ENSG00000110080:ENST00000526311:exon5:c.C252T:p.Y84Y,ENSG00000110080:ENST00000528858:exon5:c.C252T:p.Y84Y,ENSG00000110080:ENST00000530591:exon5:c.C240T:p.Y80Y,ENSG00000110080:ENST00000531217:exon5:c.C252T:p.Y84Y,ENSG00000110080:ENST00000534083:exon5:c.C252T:p.Y84Y,ENSG00000110080:ENST00000534452:exon5:c.C252T:p.Y84Y	NA	NA	11q24.2	NA	NA	Name=10	NA	rs2230278	0.38	0.38	0.356	0.346246	0.3181	0.5099	0.3242	0.3646	0.1973	0.32	0.49	0.32	0.39	0.3162	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.956413	NA	NA	0.303397	0.350522	NA	0.486	NA	5.7289696
1079	6	159146871	159146871	C	T	intronic	SYTL3	NA	NA	NA	ncRNA_exonic	ENSG00000219249	NA	NA	NA	NA	NA	6q25.3	NA	Name=TAL1_(SC-12984),GATA2_(CG2-96)	Name=3	NA	rs6455600	0.56	0.56	0.581	0.612021	0.6044	0.2351	0.4654	0.9327	0.6789	0.61	0.2	0.54	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.129204	NA	NA	NA	NA	NA	0.609	NA	5.7289333
1079	2	68882468	68882468	T	C	exonic	PROKR1	NA	synonymous SNV	PROKR1:NM_138964:exon2:c.T942C:p.F314F	exonic	ENSG00000169618	NA	synonymous SNV	ENSG00000169618:ENST00000394342:exon2:c.T942C:p.F314F,ENSG00000169618:ENST00000303786:exon3:c.T942C:p.F314F	Score=607;Name=lod=390	NA	2p13.3	NA	NA	NA	NA	rs6722313	0.4	0.4	0.359	0.452276	0.3171	0.3919	0.3055	0.6823	0.4468	0.33	0.34	0.29	0.64	0.3399	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.202458	NA	NA	0.280814	0.609169	NA	0.406	NA	5.7288526
1079	5	126887569	126887569	G	A	exonic	PRRC1	NA	synonymous SNV	PRRC1:NM_130809:exon9:c.G1299A:p.A433A	exonic	ENSG00000164244	NA	synonymous SNV	ENSG00000164244:ENST00000296666:exon9:c.G1299A:p.A433A,ENSG00000164244:ENST00000512635:exon9:c.G1299A:p.A433A	NA	NA	5q23.2	Score=680;Name=V$P53_01	NA	NA	NA	rs7522	0.4	0.4	0.388	0.38778	0.2893	0.5506	0.4524	0.3185	0.3691	0.3	0.55	0.44	0.36	0.3421	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.229504	NA	NA	0.306628	0.305493	NA	0.377	NA	5.7286386
1079	12	32777362	32777362	G	A	exonic	FGD4	NA	synonymous SNV	FGD4:NM_139241:exon12:c.G1518A:p.A506A	exonic	ENSG00000139132	NA	synonymous SNV	ENSG00000139132:ENST00000381025:exon8:c.G774A:p.A258A,ENSG00000139132:ENST00000546442:exon11:c.G1239A:p.A413A,ENSG00000139132:ENST00000427716:exon12:c.G1518A:p.A506A,ENSG00000139132:ENST00000525053:exon12:c.G1854A:p.A618A,ENSG00000139132:ENST00000531134:exon12:c.G1773A:p.A591A,ENSG00000139132:ENST00000534526:exon12:c.G1929A:p.A643A,ENSG00000139132:ENST00000266482:exon13:c.G774A:p.A258A	Score=562;Name=lod=257	NA	12p11.21	NA	NA	NA	NA	rs11052110	0.23	0.23	0.235	0.251597	0.3191	0.1667	0.268	0.1536	0.3906	0.31	0.18	0.25	0.16	0.3076	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.888582	NA	NA	0.31186	0.194961	NA	0.167	NA	5.7281066
1079	2	64327544	64327544	G	T	exonic	PELI1	NA	synonymous SNV	PELI1:NM_020651:exon4:c.C291A:p.T97T	exonic	ENSG00000197329	NA	synonymous SNV	ENSG00000197329:ENST00000358912:exon4:c.C291A:p.T97T	Score=633;Name=lod=500	NA	2p14	NA	NA	NA	NA	rs329498	0.37	0.37	0.353	0.355631	0.2992	0.752	0.3127	0.0885	0.3967	0.3	0.73	0.35	0.08	0.3365	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.942026	NA	NA	0.303837	0.137767	NA	0.333	NA	5.7271296
1079	2	171240249	171240249	C	T	exonic	MYO3B	NA	synonymous SNV	MYO3B:NM_001083615:exon12:c.C1215T:p.R405R,MYO3B:NM_138995:exon12:c.C1215T:p.R405R	exonic	ENSG00000071909	NA	synonymous SNV	ENSG00000071909:ENST00000317935:exon12:c.C1215T:p.R405R,ENSG00000071909:ENST00000334231:exon12:c.C1242T:p.R414R,ENSG00000071909:ENST00000408978:exon12:c.C1215T:p.R405R,ENSG00000071909:ENST00000409044:exon12:c.C1215T:p.R405R,ENSG00000071909:ENST00000484338:exon12:c.C1242T:p.R414R	Score=554;Name=lod=237	NA	2q31.1	NA	NA	NA	NA	rs11675394	0.23	0.23	0.236	0.215455	0.325	0.2887	0.2493	0.0303	0.2536	0.32	0.26	0.27	0.04	0.2908	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.035071	NA	NA	0.325833	0.085737	ID=COSM1564691,COSM1564692;OCCURENCE=1(large_intestine)	0.188	NA	5.7250336
1080	2	141032088	141032088	C	T	exonic	LRP1B	NA	synonymous SNV	LRP1B:NM_018557:exon85:c.G13047A:p.T4349T	exonic	ENSG00000168702	NA	synonymous SNV	ENSG00000168702:ENST00000389484:exon85:c.G13047A:p.T4349T	NA	NA	2q22.1	NA	NA	NA	NA	rs1386356	0.54	0.54	0.514	0.486222	0.665	0.6508	0.5735	0.1558	0.5174	0.67	0.67	0.57	0.19	0.6037	0.67	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.958	T	0.000	T	.	1.074	9.384	-2.23	-0.237	0.285	1.766	1.073697	NA	NA	0.673256	0.256241	NA	0.5	NA	5.7247106
1080	17	7680159	7680159	G	A	exonic	DNAH2	NA	synonymous SNV	DNAH2:NM_020877:exon31:c.G5010A:p.A1670A	exonic	ENSG00000183914	NA	synonymous SNV	ENSG00000183914:ENST00000389173:exon31:c.G5010A:p.A1670A,ENSG00000183914:ENST00000572933:exon32:c.G5010A:p.A1670A	Score=583;Name=lod=313	NA	17p13.1	NA	NA	NA	NA	rs62059684	0.18	0.18	0.147	0.120407	0.3579	NA	0.2046	0.0113	0.0879	0.37	NA	0.26	0.02	0.2423	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.317404	1.317404	NA	0.342093	0.065365	NA	0.174	NA	5.7243736
1080	2	96944553	96944553	G	A	exonic	SNRNP200	NA	synonymous SNV	SNRNP200:NM_014014:exon37:c.C5317T:p.L1773L	exonic	ENSG00000144028	NA	synonymous SNV	ENSG00000144028:ENST00000429650:exon8:c.C898T:p.L300L,ENSG00000144028:ENST00000323853:exon37:c.C5317T:p.L1773L	Score=615;Name=lod=423	NA	2q11.2	NA	NA	NA	NA	rs772175	0.31	0.31	0.258	0.246006	0.3101	0.4256	0.3242	0.0764	0.1687	0.33	0.46	0.3	0.09	0.3097	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.801735	NA	NA	0.322558	0.114163	NA	0.304	NA	5.7243086
1080	5	96062617	96062617	C	T	intronic	CAST	NA	NA	NA	intronic	ENSG00000153113	NA	NA	NA	NA	NA	5q15	NA	Name=CEBPB	Name=14	NA	rs17478897	0.06	0.06	0.054	0.0567093	0.1382	NA	0.1023	0.0045	0.0695	0.13	NA	0.1	0.01	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.046106	NA	NA	0.137964	0.022399	NA	0.167	NA	5.723836
1080	13	21750890	21750890	G	A	intronic	MRP63	NA	NA	NA	intronic	ENSG00000173141	NA	NA	NA	NA	NA	13q12.11	NA	Name=TBP,c-Myc,ZEB1_(SC-25388),HEY1,NFKB,HA-E2F1,Pol2-4H8,Pol2(b),EBF,CTCF,EBF1_(C-8),CHD2_(N-1250),CEBPB,Oct-2,NRSF,Pol2,Pol2(phosphoS2),TAF7_(SQ-8),TAF1,POU2F2,ZBTB33	Name=148	NA	rs9550716	0.28	0.28	0.303	0.317292	0.2763	0.1657	0.2219	0.4584	0.3926	0.26	0.19	0.25	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.471642	NA	NA	NA	NA	NA	0.326	NA	5.7237
1080	4	185701549	185701549	G	T	exonic	ACSL1	NA	synonymous SNV	ACSL1:NM_001995:exon5:c.C414A:p.I138I	exonic	ENSG00000151726	NA	synonymous SNV	ENSG00000151726:ENST00000281455:exon5:c.C414A:p.I138I,ENSG00000151726:ENST00000504342:exon5:c.C414A:p.I138I,ENSG00000151726:ENST00000504900:exon5:c.C414A:p.I138I,ENSG00000151726:ENST00000513317:exon5:c.C414A:p.I138I,ENSG00000151726:ENST00000515030:exon5:c.C414A:p.I138I	Score=395;Name=lod=54	NA	4q35.1	NA	NA	NA	NA	rs1803898	0.18	0.18	0.175	0.160743	0.3489	0.0645	0.1729	0.0303	0.2342	0.35	0.07	0.22	0.03	0.259	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.659216	NA	NA	0.336047	0.073309	NA	0.174	NA	5.7227196
1080	12	31405170	31405170	A	G	intergenic	DDX11,FAM60A	dist=147445;dist=28350	NA	NA	ncRNA_exonic	ENSG00000243517	NA	NA	NA	Score=741;Name=lod=1365	NA	12p11.21	NA	NA	Name=19	NA	rs670519	0.3	0.3	0.247	0.298922	0.2773	0.1944	0.2752	0.553	0.1022	0.26	0.18	0.25	0.52	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.151116	NA	NA	NA	NA	NA	0.225	NA	5.7227
1080	14	74766080	74766080	T	C	intronic	ABCD4	NA	NA	NA	intronic	ENSG00000119688	NA	NA	NA	NA	NA	14q24.3	NA	Name=Max	Name=67	NA	rs2301346	0.19	0.19	0.188	0.170727	0.2773	0.1974	0.1686	0.0575	0.1881	0.28	0.17	0.18	0.06	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.037647	NA	NA	NA	NA	NA	0.217	NA	5.7227
1080	8	6377433	6377433	C	T	exonic	ANGPT2	NA	synonymous SNV	ANGPT2:NM_001118888:exon4:c.G726A:p.T242T,ANGPT2:NM_001118887:exon5:c.G879A:p.T293T,ANGPT2:NM_001147:exon5:c.G882A:p.T294T	exonic	ENSG00000091879	NA	synonymous SNV	ENSG00000091879:ENST00000338312:exon4:c.G726A:p.T242T,ENSG00000091879:ENST00000325203:exon5:c.G882A:p.T294T,ENSG00000091879:ENST00000415216:exon5:c.G879A:p.T293T,ENSG00000091879:ENST00000523120:exon5:c.G879A:p.T293T	NA	NA	8p23.1	Score=751;Name=V$TCF11MAFG_01	NA	NA	NA	rs1961222	0.17	0.17	0.15	0.14976	0.3419	0.0516	0.2104	0.0121	0.1963	0.33	0.05	0.25	0.01	0.2648	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.083956	NA	NA	0.337558	0.060826	NA	0.159	NA	5.7224086
1080	14	77872977	77872977	C	G	intronic	NOXRED1	NA	NA	NA	intronic	ENSG00000165555	NA	NA	NA	NA	NA	14q24.3	NA	Name=GATA3_(SC-268)	Name=38	NA	rs80329306	NA	NA	NA	0.161542	0.2008	0.0298	0.1153	0.2504	0.1697	NA	NA	NA	NA	0.0682	0.054	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.189614	NA	NA	0.008617	0.002498	NA	0.072	NA	5.722383
1080	19	4254375	4254375	C	T	exonic	CCDC94	NA	synonymous SNV	CCDC94:NM_018074:exon4:c.C294T:p.Y98Y	exonic	ENSG00000105248	NA	synonymous SNV	ENSG00000105248:ENST00000262962:exon4:c.C294T:p.Y98Y,ENSG00000105248:ENST00000596496:exon4:c.C189T:p.Y63Y	Score=525;Name=lod=181	NA	19p13.3	NA	NA	NA	NA	rs11085068	0.38	0.38	0.387	0.417732	0.3091	0.4435	0.2695	0.5083	0.4857	0.32	0.45	0.27	0.49	0.3469	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.953786	NA	NA	0.288605	0.490695	ID=COSM148459;OCCURENCE=1(stomach)	0.377	NA	5.7220616
1080	12	121648132	121648132	G	T	intronic	P2RX4	NA	NA	NA	intronic	ENSG00000135124	NA	NA	NA	NA	NA	12q24.31	NA	Name=HMGN3,Pol2,E2F6,eGFP-JunD,NFKB,c-Myc,PAX5-N19,PAX5-C20,TBP,AP-2alpha,Pol2(b),ZNF263,Pol2-4H8,Sin3Ak-20,HA-E2F1	Name=144	NA	rs28360467	0.05	0.05	0.051	0.0325479	0.0924	0.001	0.0706	0.0061	0.0123	0.1	0.0017	0.06	0.01	0.0974	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.658797	1.658797	NA	0.088907	0.015748	NA	NA	NA	5.721293
1080	12	131622735	131622735	T	C	exonic	GPR133	NA	synonymous SNV	GPR133:NM_198827:exon24:c.T2490C:p.S830S	exonic	ENSG00000111452	NA	synonymous SNV	ENSG00000111452:ENST00000543617:exon11:c.T1047C:p.S349S,ENSG00000111452:ENST00000376682:exon16:c.T1548C:p.S516S,ENSG00000111452:ENST00000261654:exon24:c.T2490C:p.S830S,ENSG00000111452:ENST00000535015:exon25:c.T2586C:p.S862S	NA	NA	12q24.33	NA	NA	NA	NA	rs7302341	0.67	0.67	0.606	0.663938	0.6471	0.9306	0.7378	0.3495	0.7791	0.65	0.93	0.71	0.35	0.6714	0.93	.	.	.	.	.	.	.	.	0.002	P	.	.	.	.	-1.020	T	0.000	T	.	0.2	5.077	-1.77	-0.786	-3.362	10.522	0.19983	NA	NA	0.627442	0.418747	NA	0.457	NA	5.7207246
1080	19	41328196	41328196	C	T	intergenic	RAB4B-EGLN2,CYP2A6	dist=13850;dist=21247	NA	NA	ncRNA_exonic	ENSG00000237118	NA	NA	NA	Score=439;Name=lod=81	NA	19q13.2	NA	NA	Name=3	NA	rs34842714	0.27	0.27	0.216	0.278554	0.2793	0.375	0.4265	0.0295	0.41	0.28	0.38	0.37	0.05	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.918097	NA	NA	NA	NA	NA	0.275	NA	5.7207
1080	15	42171537	42171537	A	G	exonic	SPTBN5	NA	nonsynonymous SNV	SPTBN5:NM_016642:exon16:c.T3103C:p.C1035R	exonic	ENSG00000137877	NA	nonsynonymous SNV	ENSG00000137877:ENST00000320955:exon16:c.T3103C:p.C1035R	NA	NA	15q15.1	NA	NA	NA	NA	rs1197683	0.9	0.9	0.893	0.879992	0.8748	0.9712	0.8905	0.8578	0.8139	0.89	0.98	0.9	0.84	0.8744	0.98	0.9	T	.	.	.	.	0.853	N	1.000	P	.	.	-0.5	T	-0.956	T	0.000	T	0.031	-0.337	2.403	2.82	0.088	0.735	4.971	-0.337161	NA	0.87	0.863669	0.854053	NA	0.891	NA	5.7204644
1080	7	91570290	91570290	G	C	UTR5	AKAP9	NM_147185:c.-124G>C,NM_005751:c.-124G>C	NA	NA	UTR5	ENSG00000127914	ENST00000356239:c.-124G>C,ENST00000358100:c.-124G>C,ENST00000359028:c.-124G>C,ENST00000394564:c.-124G>C	NA	NA	NA	NA	7q21.2	NA	Name=AP-2alpha,Pol2(b),ZNF263,Pol2-4H8,HA-E2F1,Sin3Ak-20,YY1,PAX5-C20,HEY1,NFKB,CCNT2,TBP,HMGN3,TAF1,E2F6,YY1_(C-20),TAF7_(SQ-8),Pol2,ELF1_(SC-631),FOXA1_(SC-101058)	Name=146	NA	rs4727267	0.64	0.64	0.612	0.628594	0.6133	0.8383	0.6427	0.5008	0.591	0.61	0.83	0.62	0.49	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.42049	1.42049	NA	NA	NA	NA	0.587	NA	5.7200334
1080	17	39092868	39092868	G	A	UTR5	KRT23	NM_015515:c.-13C>T	NA	NA	ncRNA_UTR5	ENSG00000108244	NA	NA	NA	NA	NA	17q21.2	NA	Name=TAF1,Pol2,TBP	Name=19	NA	rs2269858	0.32	0.32	0.287	0.322484	0.2396	0.4246	0.4251	0.2655	0.3067	0.24	0.46	0.39	0.24	0.3023	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.713551	1.713551	NA	0.238324	0.238237	NA	0.261	NA	5.719776
1080	4	69885683	69885683	T	C	exonic	UGT2B10	NA	unknown	UNKNOWN	ncRNA_exonic	ENSG00000251685	NA	NA	NA	NA	NA	4q13.2	NA	Name=FOXA2_(SC-6554),FOXA1_(SC-101058)	NA	NA	rs148467728	0.03	0.03	0.012	0.0183706	0.0437	0.001	0.0519	0.003	0.0072	0.05	NA	0.05	0.002	0.0305	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.067462	NA	NA	0.039962	0.007948	NA	0.014	NA	5.7191713
1080	12	11286790	11286790	A	C	exonic	TAS2R30	NA	synonymous SNV	TAS2R30:NM_001097643:exon1:c.T54G:p.V18V	exonic	ENSG00000256188	NA	synonymous SNV	ENSG00000256188:ENST00000539585:exon1:c.T54G:p.V18V	NA	NA	12p13.2	NA	NA	Name=15	NA	rs2600355	0.36	0.36	0.305	0.351637	0.5109	0.1944	0.4712	0.357	0.2577	0.49	0.21	0.4	0.33	0.4366	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.352485	NA	NA	NA	NA	NA	0.413	NA	5.7191666
1080	7	92734451	92734451	A	G	exonic	SAMD9	NA	synonymous SNV	SAMD9:NM_001193307:exon2:c.T960C:p.Y320Y,SAMD9:NM_017654:exon3:c.T960C:p.Y320Y	exonic	ENSG00000205413	NA	synonymous SNV	ENSG00000205413:ENST00000446617:exon2:c.T960C:p.Y320Y,ENSG00000205413:ENST00000379958:exon3:c.T960C:p.Y320Y	Score=278;Name=lod=18	NA	7q21.2	NA	NA	NA	NA	rs6965201	0.5	0.5	0.493	0.521166	0.2873	0.5188	0.4971	0.8359	0.3558	0.28	0.52	0.51	0.8	0.3733	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.105537	NA	NA	0.287209	0.731729	NA	0.5	NA	5.7188576
1080	2	38044344	38044344	C	T	intergenic	CDC42EP3,RMDN2	dist=144666;dist=108118	NA	NA	ncRNA_exonic	ENSG00000225402	NA	NA	NA	Score=670;Name=lod=702	Name=Bone mineral density (spine)	2p22.2	NA	NA	NA	NA	rs4670779	0.22	0.22	0.184	0.205871	0.2813	0.2272	0.3084	0.0204	0.2843	0.29	0.26	0.28	0.02	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.413131	NA	NA	NA	NA	NA	0.152	NA	5.7187
1080	16	84623989	84623989	T	C	intronic	COTL1	NA	NA	NA	intronic	ENSG00000103187	NA	NA	NA	NA	NA	16q24.1	NA	Name=EBF1_(C-8)	Name=4	NA	rs2288584	0.2	0.2	0.204	0.155351	0.2813	0.2361	0.1744	0.0333	0.0941	0.29	0.25	0.19	0.03	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.548272	NA	NA	NA	NA	NA	0.254	NA	5.7187
1080	14	96152728	96152728	T	C	upstream	TCL1B	NA	NA	NA	ncRNA_intronic	ENSG00000259084	NA	NA	NA	NA	NA	14q32.13	NA	Name=Egr-1	Name=2	NA	rs11160284	0.42	0.42	0.399	0.436901	0.4483	0.5536	0.3271	0.2791	0.5961	0.46	0.54	0.37	0.26	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.118925	NA	NA	NA	NA	NA	0.174	NA	5.7183666
1080	19	38795250	38795250	G	A	UTR3	YIF1B	NM_001145463:c.*879C>T,NM_001039673:c.*742C>T,NM_001039672:c.*742C>T,NM_001039671:c.*742C>T,NM_033557:c.*742C>T,NM_001145462:c.*742C>T,NM_001145461:c.*742C>T	NA	NA	exonic	ENSG00000167644,ENSG00000267748	NA	nonsynonymous SNV	ENSG00000167644:ENST00000588605:exon3:c.G184A:p.A62T	NA	NA	19q13.2	NA	Name=HNF4G_(SC-6558),Pol2,HNF4A_(H-171),Ini1	NA	NA	rs45437199	0.18	0.18	0.149	0.176118	0.2207	0.1478	0.2507	0.0598	0.2638	0.23	0.15	0.26	0.07	0.2051	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.467849	NA	NA	0.190233	0.075806	NA	0.145	NA	5.7173004
1080	16	15133889	15133889	T	G	exonic	NTAN1	NA	synonymous SNV	NTAN1:NM_001270767:exon6:c.A261C:p.A87A,NTAN1:NM_001270766:exon7:c.A261C:p.A87A,NTAN1:NM_173474:exon8:c.A576C:p.A192A	exonic	ENSG00000157045	NA	synonymous SNV	ENSG00000157045:ENST00000568320:exon6:c.A261C:p.A87A,ENSG00000157045:ENST00000287706:exon8:c.A576C:p.A192A,ENSG00000157045:ENST00000566419:exon8:c.A495C:p.A165A	Score=410;Name=lod=62	NA	16p13.11	NA	NA	NA	NA	rs14347	0.33	0.33	0.283	0.344649	0.3072	0.372	0.5331	0.1846	0.4376	0.32	0.38	0.48	0.19	0.3419	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.301996	1.301996	NA	0.30093	0.227583	NA	0.413	NA	5.7166366
1080	6	42942779	42942779	A	G	intronic	PEX6	NA	NA	NA	intronic	ENSG00000124587	NA	NA	NA	Score=355;Name=lod=37	NA	6p21.1	NA	NA	Name=19	NA	rs9986447	0.3	0.3	0.286	0.289736	0.4592	0.1012	0.3401	0.2216	0.3661	0.46	0.12	0.35	0.21	0.3776	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.686963	1.686963	NA	0.446744	0.2399	NA	0.254	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000078578.1;CLNDSDB=.;CLNDSDBID=.	5.716456
1080	20	1285933	1285933	G	A	exonic	SNPH	NA	synonymous SNV	SNPH:NM_014723:exon6:c.G720A:p.G240G	exonic	ENSG00000101298	NA	synonymous SNV	ENSG00000101298:ENST00000381873:exon6:c.G720A:p.G240G,ENSG00000101298:ENST00000381867:exon7:c.G852A:p.G284G	NA	NA	20p13	Score=860;Name=V$GATA1_02	NA	NA	NA	rs3795139	0.41	0.41	0.401	0.39397	0.3201	0.5407	0.3314	0.3979	0.3579	0.31	0.54	0.34	0.47	0.3419	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.620788	NA	NA	0.288359	0.380736	NA	0.326	NA	5.7163076
1080	3	49701298	49701298	G	A	exonic	BSN	NA	nonsynonymous SNV	BSN:NM_003458:exon8:c.G11587A:p.A3863T	exonic	ENSG00000164061	NA	nonsynonymous SNV	ENSG00000164061:ENST00000296452:exon8:c.G11587A:p.A3863T	NA	NA	3p21.31	NA	NA	NA	NA	rs2005557	0.61	0.61	0.598	0.640375	0.5099	0.9325	0.683	0.4032	0.7638	0.51	0.94	0.63	0.38	0.5906	0.94	1	T	0.0	B	0.0	B	0.955	N	1.000	P	0.345	N	2.25	T	-0.951	T	0.000	T	0.014	0.322	5.748	1.26	0.010	0.707	1.03	0.32236	NA	0.87	0.516628	0.431911	ID=COSM1179807;OCCURENCE=1(prostate)	0.522	NA	5.7162054
1080	5	123983915	123983915	G	T	exonic	ZNF608	NA	nonsynonymous SNV	ZNF608:NM_020747:exon4:c.C2162A:p.T721N	exonic	ENSG00000168916	NA	nonsynonymous SNV	ENSG00000168916:ENST00000306315:exon4:c.C2162A:p.T721N,ENSG00000168916:ENST00000504926:exon4:c.C881A:p.T294N	NA	NA	5q23.2	NA	NA	NA	NA	rs6862252	0.63	0.63	0.626	0.629992	0.5457	0.753	0.451	0.7065	0.6135	0.54	0.76	0.47	0.73	0.5625	0.76	0.58	T	0.0	B	0.0	B	0.032	N	1.000	P	-0.55	N	0.98	T	-1.006	T	0.000	T	0.012	-0.047	3.774	-0.826	-0.377	-0.204	7.473	-0.046942	NA	0.45	0.50907	0.656151	NA	0.659	NA	5.7160634
1080	19	4251069	4251069	T	C	exonic	CCDC94	NA	synonymous SNV	CCDC94:NM_018074:exon3:c.T171C:p.N57N	exonic	ENSG00000105248	NA	synonymous SNV	ENSG00000105248:ENST00000262962:exon3:c.T171C:p.N57N,ENSG00000105248:ENST00000596496:exon3:c.T66C:p.N22N	Score=528;Name=lod=186	NA	19p13.3	NA	NA	NA	NA	rs1045750	0.44	0.44	0.46	0.476238	0.3022	0.4464	0.2795	0.7262	0.4877	0.31	0.45	0.28	0.72	0.3628	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.128191	NA	NA	0.285814	0.666364	ID=COSM148458;OCCURENCE=1(stomach)	0.428	NA	5.7158526
1080	2	170129528	170129528	G	A	exonic	LRP2	NA	synonymous SNV	LRP2:NM_004525:exon15:c.C2025T:p.V675V	exonic	ENSG00000081479	NA	synonymous SNV	ENSG00000081479:ENST00000443831:exon14:c.C1818T:p.V606V,ENSG00000081479:ENST00000263816:exon15:c.C2025T:p.V675V	Score=602;Name=lod=373	NA	2q31.1	NA	NA	NA	NA	rs830994	0.66	0.66	0.671	0.609625	0.661	0.8859	0.5014	0.5045	0.4908	0.66	0.87	0.55	0.49	0.6245	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.287532	1.287532	NA	0.665465	0.516568	NA	0.565	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117515.2;CLNDSDB=.;CLNDSDBID=.	5.7157016
1080	9	127616537	127616537	A	G	exonic	WDR38	NA	nonsynonymous SNV	WDR38:NM_001276376:exon2:c.A29G:p.K10R	exonic	ENSG00000136918	NA	synonymous SNV	ENSG00000136918:ENST00000373574:exon2:c.A123G:p.E41E	Score=401;Name=lod=57	NA	9q33.3	NA	NA	NA	NA	rs12375547	0.46	0.46	0.479	0.452676	0.4324	0.5804	0.3573	0.4803	0.3722	0.4	0.6	0.36	0.46	0.4199	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.921346	NA	NA	0.432137	0.48	NA	0.413	NA	5.715563
1081	9	134351343	134351343	C	T	exonic	PRRC2B	NA	nonsynonymous SNV	PRRC2B:NM_013318:exon15:c.C3827T:p.A1276V	exonic	ENSG00000130723	NA	nonsynonymous SNV	ENSG00000130723:ENST00000357304:exon15:c.C3827T:p.A1276V	NA	NA	9q34.13	NA	NA	NA	NA	rs11243403	0.36	0.36	0.362	0.335663	0.5586	0.1161	0.3228	0.3707	0.2945	0.55	0.11	0.37	0.36	0.4732	0.59	0.29	T	0.0	B	0.0	B	.	.	1.000	P	-0.69	N	4.59	T	-1.097	T	0.000	T	0.166	-0.589	1.36	0.799	-0.091	0.735	5.318	-0.588965	NA	0.34	0.587464	0.418693	NA	0.341	NA	5.7140694
1081	4	39978005	39978005	A	G	intronic	PDS5A	NA	NA	NA	intronic	ENSG00000121892	NA	NA	NA	NA	NA	4p14	NA	Name=GATA-2,BCLAF1_(M33-P5B11),Pol2,eGFP-GATA2,AP-2gamma	Name=3	NA	rs35426579	0.17	0.17	0.128	0.149161	0.2863	0.0417	0.3055	0.0204	0.182	0.28	0.04	0.35	0.02	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.507489	NA	NA	NA	NA	NA	0.232	NA	5.7137
1081	8	82433970	82433970	G	A	intergenic	FABP4,FABP12	dist=38497;dist=3311	NA	NA	ncRNA_exonic	ENSG00000237264,ENSG00000253374,ENSG00000253859	NA	NA	NA	Score=745;Name=lod=1425	NA	8q21.13	NA	Name=CEBPB,USF-1,TAL1_(SC-12984)	NA	NA	rs62514765	0.3	0.3	0.286	0.336661	0.2863	0.1379	0.3963	0.4788	0.3589	0.27	0.13	0.36	0.5	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.451934	1.451934	NA	NA	NA	NA	0.297	NA	5.7137
1081	15	84958367	84958367	C	T	intergenic	GOLGA6L4,DNM1P41	dist=44247;dist=87439	NA	NA	ncRNA_exonic	ENSG00000235370	NA	NA	NA	Score=300;Name=lod=22	NA	15q25.2	NA	NA	NA	NA	rs468120	0.21	0.21	0.114	0.208866	0.2863	0.3056	0.196	0.0416	0.2648	0.28	0.29	0.2	0.04	NA	0.29	0.51	T	.	.	.	.	0.045	N	.	.	.	.	.	.	-0.978	T	0.000	T	.	-0.566	1.449	.	0.107	-0.204	3.629	-0.565513	NA	0.12	NA	NA	NA	NA	NA	5.7137
1081	9	136227017	136227017	G	A	intronic	SURF2	NA	NA	NA	intronic	ENSG00000148291	NA	NA	NA	NA	NA	9q34.2	NA	Name=Pol2-4H8,ZNF263	Name=14	NA	rs2296809	0.08	0.08	0.079	0.0636981	0.1054	0.0952	0.0749	0.003	0.0624	0.1	0.09	0.09	NA	0.0775	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.878229	NA	NA	0.103837	0.022025	NA	0.094	NA	5.713263
1081	6	111587266	111587266	T	C	exonic	KIAA1919	NA	synonymous SNV	KIAA1919:NM_153369:exon4:c.T501C:p.D167D	exonic	ENSG00000173214	NA	synonymous SNV	ENSG00000173214:ENST00000368847:exon4:c.T501C:p.D167D	NA	NA	6q21	NA	Name=GATA-1,NF-YA,TAL1_(SC-12984),Pol2,c-Jun,eGFP-JunD,FOSL1_(SC-183),NF-YB	Name=34	NA	rs11153279	0.47	0.47	0.454	0.42512	0.672	0.4335	0.5476	0.0862	0.5337	0.66	0.46	0.57	0.1	0.5849	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.809077	NA	NA	0.696628	0.186791	NA	0.478	NA	5.7131386
1081	12	117685270	117685270	G	A	exonic	NOS1	NA	synonymous SNV	NOS1:NM_001204213:exon17:c.C1698T:p.H566H,NOS1:NM_001204214:exon17:c.C1698T:p.H566H,NOS1:NM_000620:exon18:c.C2706T:p.H902H,NOS1:NM_001204218:exon19:c.C2808T:p.H936H	exonic	ENSG00000089250	NA	synonymous SNV	ENSG00000089250:ENST00000317775:exon18:c.C2706T:p.H902H,ENSG00000089250:ENST00000338101:exon18:c.C2808T:p.H936H	NA	NA	12q24.22	Score=826;Name=V$CEBP_C	NA	NA	NA	rs1047735	0.36	0.36	0.339	0.346446	0.3151	0.502	0.5231	0.1982	0.2935	0.33	0.46	0.5	0.19	0.3365	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.830664	NA	NA	0.301948	0.175279	NA	0.362	NA	5.7131186
1081	19	49967981	49967981	T	G	exonic	ALDH16A1	NA	synonymous SNV	ALDH16A1:NM_001145396:exon11:c.T1377G:p.V459V,ALDH16A1:NM_153329:exon12:c.T1530G:p.V510V	exonic	ENSG00000161618	NA	synonymous SNV	ENSG00000161618:ENST00000600265:exon2:c.T177G:p.V59V,ENSG00000161618:ENST00000540132:exon9:c.T1041G:p.V347V,ENSG00000161618:ENST00000433981:exon10:c.T1035G:p.V345V,ENSG00000161618:ENST00000455361:exon11:c.T1377G:p.V459V,ENSG00000161618:ENST00000293350:exon12:c.T1530G:p.V510V	NA	NA	19q13.33	Score=773;Name=V$PPARA_01	NA	NA	NA	rs11558188	0.25	0.25	0.267	0.209864	0.335	0.005	0.2277	0.3396	0.1043	0.33	0.01	0.25	0.38	0.2683	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.69616	1.69616	NA	0.350465	0.310486	NA	0.268	NA	5.7129016
1081	20	44418564	44418564	A	G	exonic	WFDC3	NA	synonymous SNV	WFDC3:NM_080614:exon2:c.T51C:p.S17S	exonic	ENSG00000124116	NA	synonymous SNV	ENSG00000124116:ENST00000372630:exon1:c.T51C:p.S17S,ENSG00000124116:ENST00000372632:exon1:c.T51C:p.S17S,ENSG00000124116:ENST00000243938:exon2:c.T51C:p.S17S	Score=374;Name=lod=44	NA	20q13.12	NA	NA	NA	NA	rs3746493	0.65	0.65	0.634	0.626398	0.6561	0.6458	0.7507	0.6172	0.5	0.68	0.62	0.72	0.58	0.6435	0.72	.	.	.	.	.	.	.	.	0.995	P	.	.	.	.	-0.984	T	0.000	T	.	0.995	9.062	0.933	0.009	-0.018	6.624	0.994677	NA	NA	0.654419	0.640036	NA	0.659	NA	5.7126476
1081	11	123777498	123777498	C	T	exonic	OR8D4	NA	synonymous SNV	OR8D4:NM_001005197:exon1:c.C360T:p.C120C	exonic	ENSG00000181518	NA	synonymous SNV	ENSG00000181518:ENST00000321355:exon1:c.C360T:p.C120C	Score=441;Name=lod=83	NA	11q24.1	NA	NA	NA	NA	rs10893102	0.22	0.22	0.208	0.266573	0.3151	0.378	0.3271	0.0794	0.3119	0.26	0.29	0.24	0.06	0.3093	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.877867	NA	NA	0.329844	0.12693	NA	NA	NA	5.7124226
1081	3	66444697	66444697	A	C	intronic	LRIG1	NA	NA	NA	intronic	ENSG00000144749	NA	NA	NA	NA	NA	3p14.1	NA	Name=TAF1,PU.1,Pol2,Pol2-4H8,NFKB,PAX5-N19,TCF12	Name=10	NA	rs17775391	0.39	0.39	0.368	0.360623	0.2883	0.744	0.2507	0.1498	0.4029	0.3	0.75	0.3	0.16	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.236791	NA	NA	NA	NA	NA	0.355	NA	5.7117
1081	11	10500056	10500056	T	C	intronic	AMPD3	NA	NA	NA	intronic	ENSG00000133805	NA	NA	NA	Score=603;Name=lod=376	NA	11p15.4	NA	NA	NA	NA	rs73409951	0.12	0.12	0.127	0.135583	0.1014	0.0317	0.0821	0.2943	0.1012	0.1	0.02	0.09	0.31	0.0984	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.171852	2.171852	NA	0.088619	0.234076	NA	0.116	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000079368.1;CLNDSDB=.;CLNDSDBID=.	5.711581
1081	14	105413204	105413204	G	T	exonic	AHNAK2	NA	nonsynonymous SNV	AHNAK2:NM_138420:exon7:c.C8584A:p.R2862S	exonic	ENSG00000185567	NA	nonsynonymous SNV	ENSG00000185567:ENST00000333244:exon7:c.C8584A:p.R2862S	NA	NA	14q32.33	NA	NA	NA	NA	rs2582514	0.49	0.49	0.501	0.567093	0.5328	0.3899	0.5173	0.7065	0.6319	0.47	0.33	0.51	0.69	0.5477	0.71	0.74	T	0.0	B	0.0	B	.	.	1.000	P	-2.22	N	5.81	T	-1.102	T	0.000	T	0.018	-0.875	0.492	0.525	-0.439	0.000	5.562	-0.875121	NA	0.79	0.541345	0.70748	ID=COSM1368617;OCCURENCE=1(liver),1(large_intestine)	0.601	NA	5.7114884
1081	1	152975941	152975941	C	G	exonic	SPRR3	NA	nonsynonymous SNV	SPRR3:NM_001097589:exon2:c.C445G:p.L149V,SPRR3:NM_005416:exon3:c.C445G:p.L149V	exonic	ENSG00000163209	NA	nonsynonymous SNV	ENSG00000163209:ENST00000295367:exon2:c.C445G:p.L149V,ENSG00000163209:ENST00000542696:exon2:c.C421G:p.L141V,ENSG00000163209:ENST00000331860:exon3:c.C445G:p.L149V,ENSG00000163209:ENST00000443178:exon3:c.C445G:p.L149V	NA	NA	1q21.3	NA	NA	NA	NA	rs1055935	0.6	0.6	0.626	0.583466	0.5328	0.6319	0.4496	0.7133	0.5051	0.53	0.66	0.49	0.73	0.5448	0.73	0.38	T	0.002	B	0.002	B	.	.	1.000	P	-1.04	N	3.17	T	-0.920	T	0.002	T	0.249	-1.624	0.013	-0.145	0.064	0.505	1.562	-1.623696	NA	1	0.544302	0.684748	NA	0.522	NA	5.7114314
1081	16	1279623	1279623	G	A	exonic	TPSB2	NA	synonymous SNV	TPSB2:NM_024164:exon3:c.C177T:p.C59C	exonic	ENSG00000197253	NA	synonymous SNV	ENSG00000197253:ENST00000430512:exon3:c.C177T:p.C59C	Score=387;Name=lod=50	NA	16p13.3	NA	NA	NA	NA	rs2230084	0.38	0.38	0.285	0.398762	0.333	0.6766	0.2579	0.3192	0.3875	0.32	0.66	0.22	0.24	0.3323	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.198487	NA	NA	0.291482	0.311598	NA	NA	NA	5.7098846
1081	19	4511453	4511453	G	A	exonic	PLIN4	NA	nonsynonymous SNV	PLIN4:NM_001080400:exon3:c.C2477T:p.A826V	exonic	ENSG00000167676	NA	nonsynonymous SNV	ENSG00000167676:ENST00000301286:exon3:c.C2477T:p.A826V	NA	NA	19p13.3	NA	NA	NA	NA	rs7255187	0.9	0.9	0.904	0.892372	0.8668	0.9752	0.8905	0.8555	0.8845	0.86	0.97	0.88	0.89	0.8851	0.97	0.82	T	0.0	B	0.001	B	0.522	N	1.000	P	-2.24	N	4.13	T	-1.011	T	0.000	T	0.027	-0.695	0.987	3.59	0.157	-0.082	7.926	-0.695069	NA	1	0.871728	0.865706	NA	0.312	NA	5.7097054
1081	17	16722266	16722266	C	T	intergenic	USP32P1,KRT16P2	dist=14447;dist=11531	NA	NA	ncRNA_exonic	ENSG00000226145	NA	NA	NA	Score=663;Name=lod=657	NA	17p11.2	NA	Name=CTCF,CTCFL_(SC-98982)	NA	NA	rs2656363	0.16	0.16	0.152	0.154752	0.2903	0.0456	0.2378	0.0613	0.1953	0.29	0.03	0.23	0.05	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.032794	NA	NA	NA	NA	NA	0.167	NA	5.7097
1081	17	21825565	21825565	G	T	ncRNA_exonic	FAM27L	NA	NA	NA	ncRNA_exonic	ENSG00000178130	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs12453514	0.4	0.4	0.383	0.403954	0.3072	0.5903	0.4078	0.3949	0.3211	0.31	0.56	0.36	0.4	0.3505	0.56	0.52	T	.	.	.	.	.	.	0.718	P	.	.	.	.	-0.899	T	0.000	T	.	-2.555	0.003	-0.317	-2.695	-1.138	.	-2.555338	NA	NA	0.299472	0.365586	NA	0.355	NA	5.7094946
1081	19	35136617	35136617	C	T	upstream	SCGB2B3P	NA	NA	NA	ncRNA_exonic	ENSG00000269811	NA	NA	NA	NA	NA	19q13.11	NA	Name=NRSF	Name=9	NA	rs7260033	0.45	0.45	0.487	0.467252	0.4573	0.4147	0.402	0.556	0.4581	0.46	0.39	0.41	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.472212	NA	NA	NA	NA	NA	0.507	NA	5.7093666
1081	11	65123246	65123246	T	G	intronic	TIGD3	NA	NA	NA	intronic	ENSG00000173825	NA	NA	NA	NA	NA	11q13.1	NA	Name=GATA2_(CG2-96),Nrf1,TAL1_(SC-12984),Pol2-4H8,ELF1_(SC-631),GABP,ETS1,PU.1,NRSF	Name=82	NA	rs612392	0.1	0.1	0.097	0.120208	0.0905	0.0774	0.1037	0.1331	0.1892	0.08	0.09	0.11	0.11	0.1066	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.213669	NA	NA	0.093786	0.134257	NA	0.109	NA	5.709114
1081	10	97106165	97106165	T	C	exonic	SORBS1	NA	synonymous SNV	SORBS1:NM_006434:exon15:c.A1377G:p.L459L,SORBS1:NM_001034957:exon16:c.A1545G:p.L515L,SORBS1:NM_015385:exon19:c.A1773G:p.L591L,SORBS1:NM_024991:exon20:c.A1668G:p.L556L,SORBS1:NM_001034956:exon21:c.A1980G:p.L660L,SORBS1:NM_001034954:exon24:c.A2427G:p.L809L,SORBS1:NM_001034955:exon24:c.A2493G:p.L831L	exonic	ENSG00000095637	NA	synonymous SNV	ENSG00000095637:ENST00000371241:exon15:c.A1377G:p.L459L,ENSG00000095637:ENST00000371239:exon19:c.A1758G:p.L586L,ENSG00000095637:ENST00000371249:exon19:c.A1773G:p.L591L,ENSG00000095637:ENST00000306402:exon20:c.A1668G:p.L556L,ENSG00000095637:ENST00000371245:exon21:c.A1980G:p.L660L,ENSG00000095637:ENST00000607232:exon21:c.A3207G:p.L1069L,ENSG00000095637:ENST00000347291:exon22:c.A1863G:p.L621L,ENSG00000095637:ENST00000354106:exon22:c.A2337G:p.L779L,ENSG00000095637:ENST00000353505:exon23:c.A1980G:p.L660L,ENSG00000095637:ENST00000277982:exon24:c.A2493G:p.L831L,ENSG00000095637:ENST00000361941:exon24:c.A2427G:p.L809L,ENSG00000095637:ENST00000371227:exon24:c.A2289G:p.L763L,ENSG00000095637:ENST00000393949:exon24:c.A2337G:p.L779L,ENSG00000095637:ENST00000371246:exon26:c.A2493G:p.L831L,ENSG00000095637:ENST00000371247:exon26:c.A2427G:p.L809L	Score=432;Name=lod=76	NA	10q24.1	NA	NA	NA	NA	rs726176	0.4	0.4	0.36	0.407947	0.3241	0.6696	0.451	0.205	0.4683	0.33	0.66	0.41	0.2	0.3555	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.28104	1.28104	NA	0.27814	0.207671	NA	0.348	NA	5.7089266
1081	1	171653207	171653207	C	T	intergenic	MYOC,VAMP4	dist=31434;dist=16089	NA	NA	ncRNA_exonic	ENSG00000230364	NA	NA	NA	Score=822;Name=lod=2915	NA	1q24.3	NA	Name=PU.1,TAL1_(SC-12984),GATA-1	NA	NA	rs10913488	0.35	0.35	0.342	0.351038	0.2913	0.3641	0.2709	0.5166	0.2321	0.27	0.35	0.28	0.52	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.229748	NA	NA	NA	NA	NA	0.384	NA	5.7087
1081	14	94103602	94103602	G	A	exonic	UNC79	NA	synonymous SNV	UNC79:NM_020818:exon33:c.G5343A:p.T1781T	exonic	ENSG00000133958	NA	synonymous SNV	ENSG00000133958:ENST00000555664:exon32:c.G5757A:p.T1919T,ENSG00000133958:ENST00000256339:exon33:c.G5343A:p.T1781T,ENSG00000133958:ENST00000393151:exon33:c.G5874A:p.T1958T,ENSG00000133958:ENST00000553484:exon34:c.G5940A:p.T1980T	Score=507;Name=lod=154	NA	14q32.12	Score=788;Name=V$TAXCREB_01	NA	NA	NA	rs4905082	0.53	0.53	0.517	0.505192	0.674	0.3849	0.6585	0.3472	0.5603	0.68	0.39	0.69	0.35	0.6074	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.928774	NA	NA	0.676628	0.385384	NA	0.63	NA	5.7086386
1081	11	47434986	47434986	G	A	exonic	SLC39A13	NA	synonymous SNV	SLC39A13:NM_001128225:exon5:c.G573A:p.A191A,SLC39A13:NM_152264:exon5:c.G573A:p.A191A	exonic	ENSG00000165915	NA	synonymous SNV	ENSG00000165915:ENST00000524928:exon4:c.G573A:p.A191A,ENSG00000165915:ENST00000354884:exon5:c.G573A:p.A191A,ENSG00000165915:ENST00000362021:exon5:c.G573A:p.A191A,ENSG00000165915:ENST00000526614:exon5:c.G573A:p.A191A,ENSG00000165915:ENST00000533076:exon5:c.G573A:p.A191A	NA	NA	11p11.2	Score=867;Name=V$YY1_01	NA	NA	NA	rs2293576	0.24	0.24	0.235	0.270567	0.3111	0.3988	0.2147	0.0136	0.4836	0.31	0.33	0.22	0.02	0.3116	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.105277	NA	NA	0.336087	0.069514	NA	0.217	NA	5.7078796
1081	15	91009381	91009381	G	A	intronic	IQGAP1	NA	NA	NA	intronic	ENSG00000140575	NA	NA	NA	NA	NA	15q26.1	NA	Name=c-Fos	Name=53	NA	rs2074584	0.43	0.43	0.415	0.46266	0.2922	0.6468	0.5317	0.3646	0.5317	0.29	0.64	0.46	0.38	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.340442	NA	NA	NA	NA	NA	0.435	NA	5.7078
1081	16	85720955	85720955	G	A	intronic	GINS2	NA	NA	NA	intronic	ENSG00000131153	NA	NA	NA	NA	NA	16q24.1	NA	Name=ZNF263,Sin3Ak-20,Egr-1,c-Myc	Name=19	NA	rs3815797	0.19	0.19	0.186	0.159145	0.2922	0.1994	0.1888	0.0151	0.1544	0.27	0.21	0.2	0.02	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.333086	NA	NA	NA	NA	NA	0.181	NA	5.7078
1081	3	140407260	140407260	C	A	exonic	TRIM42	NA	nonsynonymous SNV	TRIM42:NM_152616:exon3:c.C1736A:p.A579E	exonic	ENSG00000155890	NA	nonsynonymous SNV	ENSG00000155890:ENST00000286349:exon3:c.C1736A:p.A579E	NA	NA	3q23	NA	NA	NA	NA	rs9876490	0.43	0.43	0.422	0.402756	0.5328	0.3899	0.5072	0.2723	0.3845	0.52	0.36	0.49	0.3	0.5137	0.58	0.18	T	0.01	B	0.021	B	0.381	U	1.000	P	0.345	N	1.09	T	-0.915	T	0.000	T	0.225	0.231	5.246	-1.19	-0.118	0.208	5.163	0.230904	NA	0.1	0.579302	0.313663	NA	0.413	NA	5.7075314
1081	8	110420429	110420429	A	G	exonic	PKHD1L1	NA	synonymous SNV	PKHD1L1:NM_177531:exon18:c.A1965G:p.E655E	exonic	ENSG00000205038	NA	synonymous SNV	ENSG00000205038:ENST00000378402:exon18:c.A1965G:p.E655E	Score=437;Name=lod=80	NA	8q23.1	NA	NA	NA	NA	rs13252234	0.32	0.32	0.277	0.314097	0.3111	0.3929	0.4741	0.1551	0.3374	0.31	0.41	0.42	0.17	0.3302	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.590733	NA	NA	0.317941	0.188139	NA	0.297	NA	5.7074256
1081	8	8234218	8234218	C	T	exonic	SGK223	NA	synonymous SNV	SGK223:NM_001080826:exon2:c.G1701A:p.P567P	exonic	ENSG00000182319	NA	synonymous SNV	ENSG00000182319:ENST00000330777:exon2:c.G1701A:p.P567P,ENSG00000182319:ENST00000520004:exon3:c.G1701A:p.P567P	NA	NA	8p23.1	NA	Name=Pol2	NA	NA	rs4840954	0.41	0.41	0.399	0.453674	0.3002	0.6409	0.4323	0.3896	0.5204	0.28	0.64	0.36	0.39	0.3859	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.159558	NA	NA	0.273308	0.322525	NA	NA	NA	5.7072586
1081	14	20824181	20824181	T	C	exonic	PARP2	NA	synonymous SNV	PARP2:NM_001042618:exon11:c.T1092C:p.Y364Y,PARP2:NM_005484:exon11:c.T1131C:p.Y377Y	exonic	ENSG00000129484	NA	synonymous SNV	ENSG00000129484:ENST00000250416:exon11:c.T1131C:p.Y377Y,ENSG00000129484:ENST00000429687:exon11:c.T1092C:p.Y364Y,ENSG00000129484:ENST00000527915:exon11:c.T1131C:p.Y377Y	NA	NA	14q11.2	NA	NA	NA	NA	rs3093930	0.58	0.58	0.564	0.510583	0.675	0.6002	0.6225	0.2867	0.4724	0.68	0.65	0.64	0.29	0.6122	0.68	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	-0.203	3.016	2.32	0.150	-0.093	5.633	-0.202879	NA	NA	0.672384	0.351081	NA	0.514	NA	5.7070826
1081	2	180348245	180348245	T	G	intronic	ZNF385B	NA	NA	NA	intronic	ENSG00000144331	NA	NA	NA	Score=765;Name=lod=1714	NA	2q31.2	Score=794;Name=V$POU3F2_01	NA	NA	NA	rs2271759	0.37	0.37	0.371	0.359425	0.2932	0.4722	0.2925	0.4123	0.2873	0.3	0.45	0.31	0.42	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.719081	1.719081	NA	NA	NA	NA	0.304	NA	5.7068
1081	3	75385314	75385314	C	T	intergenic	MIR4444-1,FAM86DP	dist=121615;dist=85389	NA	NA	ncRNA_exonic	ENSG00000228868	NA	NA	NA	Score=508;Name=lod=155	NA	3p12.3	Score=820;Name=V$FREAC2_01	NA	NA	NA	rs4552385	0.32	0.32	0.315	0.34345	0.2932	0.1905	0.2378	0.5749	0.3149	0.3	0.18	0.27	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.696627	NA	0.02	NA	NA	NA	0.312	NA	5.7068
1081	2	242572846	242572846	A	G	exonic	THAP4	NA	synonymous SNV	THAP4:NM_015963:exon2:c.T726C:p.S242S	exonic	ENSG00000176946	NA	synonymous SNV	ENSG00000176946:ENST00000407315:exon2:c.T726C:p.S242S	Score=405;Name=lod=59	NA	2q37.3	NA	NA	NA	NA	rs3208142	0.4	0.4	0.404	0.428115	0.3181	0.5665	0.3429	0.41	0.4836	0.31	0.56	0.33	0.42	0.3411	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.298307	NA	NA	0.300978	0.371766	NA	0.478	NA	5.7064886
1081	X	135430044	135430044	T	C	exonic	GPR112	NA	synonymous SNV	GPR112:NM_153834:exon6:c.T4179C:p.T1393T	exonic	ENSG00000156920	NA	synonymous SNV	ENSG00000156920:ENST00000394141:exon3:c.T3564C:p.T1188T,ENSG00000156920:ENST00000412101:exon3:c.T3564C:p.T1188T,ENSG00000156920:ENST00000287534:exon4:c.T3990C:p.T1330T,ENSG00000156920:ENST00000370652:exon4:c.T4179C:p.T1393T,ENSG00000156920:ENST00000394143:exon6:c.T4179C:p.T1393T	NA	NA	Xq26.3	NA	NA	Name=5	NA	rs877761	0.51	0.51	0.5318	NA	NA	NA	NA	NA	NA	0.48	0.37	0.47	0.76	0.4804	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.473586	NA	NA	0.480232	0.750456	NA	0.362	NA	5.7060346
1081	18	61164602	61164602	T	C	intronic	SERPINB5	NA	NA	NA	ncRNA_exonic	ENSG00000214318	NA	NA	NA	Score=678;Name=lod=761	NA	18q21.33	NA	Name=Pol2(b)	NA	NA	rs6567365	0.56	0.56	0.512	0.516773	0.6282	0.6022	0.5706	0.4017	0.4315	0.63	0.57	0.6	0.4	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.346995	NA	NA	NA	NA	NA	0.478	NA	5.7051333
1082	16	16291971	16291971	C	T	exonic	ABCC6	NA	synonymous SNV	ABCC6:NM_001171:exon10:c.G1245A:p.V415V	exonic	ENSG00000091262	NA	synonymous SNV	ENSG00000091262:ENST00000205557:exon10:c.G1245A:p.V415V,ENSG00000091262:ENST00000456970:exon10:c.G1245A:p.V415V	Score=514;Name=lod=164	NA	16p13.11	NA	NA	NA	NA	rs9940825	0.24	0.24	0.224	0.232228	0.3191	0.0972	0.3084	0.2466	0.2086	0.33	0.08	0.28	0.25	0.3067	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.067063	NA	NA	0.336241	0.246928	NA	0.167	NA	5.7046256
1082	3	148759325	148759325	T	C	exonic	HLTF	NA	synonymous SNV	HLTF:NM_003071:exon20:c.A2328G:p.A776A,HLTF:NM_139048:exon20:c.A2328G:p.A776A	exonic	ENSG00000071794	NA	synonymous SNV	ENSG00000071794:ENST00000467858:exon6:c.A732G:p.A244A,ENSG00000071794:ENST00000310053:exon20:c.A2328G:p.A776A,ENSG00000071794:ENST00000392912:exon20:c.A2328G:p.A776A,ENSG00000071794:ENST00000465259:exon20:c.A2325G:p.A775A,ENSG00000071794:ENST00000494055:exon20:c.A2328G:p.A776A	Score=613;Name=lod=413	NA	3q24	NA	NA	NA	NA	rs2290725	0.32	0.32	0.317	0.315695	0.337	0.3353	0.3098	0.32	0.272	0.32	0.33	0.32	0.3	0.3187	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.368751	1.368751	NA	0.30686	0.302088	NA	0.29	NA	5.7041066
1082	2	236957822	236957822	G	A	exonic	AGAP1	NA	nonsynonymous SNV	AGAP1:NM_014914:exon15:c.G1852A:p.V618I,AGAP1:NM_001037131:exon16:c.G2011A:p.V671I	exonic	ENSG00000157985	NA	nonsynonymous SNV	ENSG00000157985:ENST00000428334:exon12:c.G1528A:p.V510I,ENSG00000157985:ENST00000336665:exon15:c.G1852A:p.V618I,ENSG00000157985:ENST00000409538:exon15:c.G2647A:p.V883I,ENSG00000157985:ENST00000304032:exon16:c.G2011A:p.V671I	NA	NA	2q37.2	NA	NA	NA	NA	rs2034648	0.69	0.69	0.684	0.690495	0.5119	0.7282	0.7219	0.9372	0.4796	0.51	0.74	0.69	0.9	0.602	0.9	0.51	T	0.0	B	0.003	B	0.021	N	1.000	P	1.67	L	0.98	T	-1.004	T	0.000	T	0.12	1.08	9.407	0.316	-0.472	0.623	5.408	1.079584	NA	0.42	0.516163	0.863368	NA	0.703	NA	5.7032704
1082	8	90958422	90958422	T	C	exonic	NBN	NA	synonymous SNV	NBN:NM_002485:exon13:c.A2016G:p.P672P	exonic	ENSG00000104320	NA	synonymous SNV	ENSG00000104320:ENST00000265433:exon13:c.A2016G:p.P672P,ENSG00000104320:ENST00000409330:exon13:c.A1770G:p.P590P	NA	NA	8q21.3	NA	Name=Rad21	NA	NA	rs1061302	0.33	0.33	0.287	0.352835	0.3062	0.4673	0.3761	0.2156	0.4519	0.31	0.46	0.34	0.2	0.3451	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.132521	NA	NA	0.313169	0.227644	NA	0.333	NA	5.7021976
1082	6	72889472	72889472	A	G	exonic	RIMS1	NA	synonymous SNV	RIMS1:NM_014989:exon5:c.A666G:p.L222L	exonic	ENSG00000079841	NA	synonymous SNV	ENSG00000079841:ENST00000264839:exon5:c.A666G:p.L222L,ENSG00000079841:ENST00000348717:exon5:c.A666G:p.L222L,ENSG00000079841:ENST00000491071:exon5:c.A666G:p.L222L,ENSG00000079841:ENST00000517960:exon5:c.A666G:p.L222L,ENSG00000079841:ENST00000518273:exon5:c.A666G:p.L222L,ENSG00000079841:ENST00000520567:exon5:c.A666G:p.L222L,ENSG00000079841:ENST00000521978:exon5:c.A666G:p.L222L,ENSG00000079841:ENST00000522291:exon5:c.A666G:p.L222L	Score=444;Name=lod=85	NA	6q13	Score=760;Name=V$HEN1_02	NA	NA	NA	rs2249021	0.75	0.75	0.732	0.751797	0.6501	0.8323	0.7104	0.8283	0.6994	0.67	0.85	0.69	0.83	0.6762	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.236979	1.236979	NA	0.638386	0.79661	NA	0.681	NA	5.7019806
1082	1	47182206	47182206	C	T	intronic	EFCAB14	NA	NA	NA	intronic	ENSG00000159658	NA	NA	NA	Score=251;Name=lod=14	NA	1p33	Score=886;Name=V$GATA1_03	NA	NA	NA	rs3737731	0.31	0.31	0.277	0.27496	0.2982	0.3353	0.3602	0.208	0.2188	0.28	0.33	0.38	0.28	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.000318	3.000318	NA	NA	NA	NA	0.217	NA	5.7018
1082	2	210012330	210012330	G	T	intergenic	PTH2R,MAP2	dist=653099;dist=276441	NA	NA	ncRNA_exonic	ENSG00000232799	NA	NA	NA	Score=625;Name=lod=464	NA	2q34	Score=867;Name=V$NFE2_01	NA	NA	NA	rs2005352	0.27	0.27	0.267	0.247005	0.2982	0.3343	0.2421	0.1762	0.2035	0.3	0.31	0.25	0.18	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.485031	NA	NA	NA	NA	NA	0.203	NA	5.7018
1082	1	19184077	19184077	A	G	exonic	TAS1R2	NA	synonymous SNV	TAS1R2:NM_152232:exon2:c.T231C:p.F77F	exonic	ENSG00000179002	NA	synonymous SNV	ENSG00000179002:ENST00000375371:exon2:c.T231C:p.F77F	Score=541;Name=lod=210	NA	1p36.13	NA	NA	NA	NA	rs68081213	0.28	0.28	0.279	0.275759	0.326	0.1052	0.2853	0.3631	0.2751	0.33	0.1	0.32	0.37	0.3036	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.915105	NA	NA	0.335698	0.329324	NA	0.428	NA	5.7013686
1082	12	53241626	53241626	A	G	intronic	KRT78	NA	NA	NA	intronic	ENSG00000170423	NA	NA	NA	NA	NA	12q13.13	NA	Name=CTCF	Name=29	NA	rs11170287	0.13	0.13	0.115	0.0982428	0.2992	NA	0.1484	0.0091	0.0777	0.29	NA	0.16	0.02	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.362989	NA	NA	NA	NA	NA	0.036	NA	5.7008
1082	3	97887865	97887865	G	A	exonic	OR5H15	NA	nonsynonymous SNV	OR5H15:NM_001005515:exon1:c.G322A:p.V108I	exonic	ENSG00000233412	NA	nonsynonymous SNV	ENSG00000233412:ENST00000356526:exon1:c.G322A:p.V108I	NA	NA	3q11.2	NA	NA	NA	NA	rs4133320	0.58	0.58	0.606	0.591054	0.5338	0.5079	0.572	0.7247	0.5685	0.54	0.56	0.53	0.72	0.5584	0.72	0.59	T	0.007	B	0.003	B	0.946	N	1.000	P	0.82	L	7.57	T	-1.097	T	0.000	T	0.019	-1.918	0.008	1.59	0.287	0.630	8.259	-1.917797	NA	0.54	0.5406	0.693827	NA	0.478	NA	5.7005334
1082	11	33640104	33640104	A	C	exonic	KIAA1549L	NA	synonymous SNV	KIAA1549L:NM_012194:exon15:c.A4414C:p.R1472R	exonic	ENSG00000110427	NA	synonymous SNV	ENSG00000110427:ENST00000321505:exon15:c.A4414C:p.R1472R,ENSG00000110427:ENST00000389726:exon15:c.A4432C:p.R1478R	Score=634;Name=lod=504	NA	11p13	Score=840;Name=V$GRE_C	NA	NA	NA	rs768474	0.75	0.75	0.757	0.745607	0.6292	0.747	0.6441	0.9728	0.6288	0.65	0.76	0.67	0.97	0.6865	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.367966	1.367966	NA	0.650475	0.915501	NA	0.601	NA	5.7004916
1082	4	113359703	113359703	A	G	exonic	ALPK1	NA	synonymous SNV	ALPK1:NM_001253884:exon12:c.A3018G:p.R1006R,ALPK1:NM_001102406:exon13:c.A3252G:p.R1084R,ALPK1:NM_025144:exon13:c.A3252G:p.R1084R	exonic	ENSG00000073331	NA	synonymous SNV	ENSG00000073331:ENST00000504176:exon12:c.A3018G:p.R1006R,ENSG00000073331:ENST00000177648:exon13:c.A3252G:p.R1084R,ENSG00000073331:ENST00000458497:exon13:c.A3252G:p.R1084R	Score=489;Name=lod=130	NA	4q25	Score=880;Name=V$GATA1_05	NA	NA	NA	rs231247	0.68	0.68	0.699	0.661342	0.6551	0.7004	0.5749	0.7511	0.5675	0.66	0.73	0.57	0.73	0.6553	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.898188	NA	NA	0.655814	0.72719	NA	0.63	NA	5.7004526
1082	19	40366362	40366362	G	C	exonic	FCGBP	NA	synonymous SNV	FCGBP:NM_003890:exon30:c.C13872G:p.L4624L	exonic	ENSG00000090920	NA	synonymous SNV	ENSG00000090920:ENST00000221347:exon30:c.C13872G:p.L4624L	NA	NA	19q13.2	NA	Name=HA-E2F1,E2F6_(H-50),CTCF	Name=15	NA	rs3855679	0.72	0.72	0.7	0.7502	0.6431	0.7857	0.598	0.9002	0.729	0.64	0.78	0.59	0.87	0.6759	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.260452	NA	NA	0.647278	0.867333	NA	0.688	NA	5.7003886
1082	14	106791006	106791006	C	T	intergenic	LINC00226,LINC00221	dist=46040;dist=147449	NA	NA	exonic	ENSG00000211953	NA	nonsynonymous SNV	ENSG00000211953:ENST00000390613:exon2:c.G350A:p.R117K	Score=458;Name=lod=97	NA	14q32.33	NA	Name=CTCF	NA	NA	rs10148365	NA	NA	0.586	0.537939	0.5895	0.4772	0.5749	0.5416	0.5164	NA	NA	NA	NA	0.5439	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.134746	NA	0.42	NA	NA	NA	0.217	NA	5.6999334
1082	2	220380125	220380125	G	A	intronic	ASIC4	NA	NA	NA	ncRNA_intronic	ENSG00000227432	NA	NA	NA	Score=389;Name=lod=51	NA	2q35	Score=1000;Name=V$STAT3_02	NA	NA	NA	rs1872858	0.56	0.56	0.53	0.496006	0.6342	0.7659	0.5591	0.1551	0.4918	0.65	0.75	0.54	0.2	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.369148	3.369148	NA	NA	NA	NA	0.58	NA	5.6991333
1082	6	133136041	133136041	C	G	intronic	RPS12	NA	NA	NA	intronic	ENSG00000112306	NA	NA	NA	NA	NA	6q23.2	NA	Name=Pol2	Name=20	NA	rs9493451	0.34	0.34	0.326	0.365415	0.3012	0.2282	0.536	0.4402	0.3507	0.29	0.24	0.52	0.41	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.822879	NA	NA	NA	NA	NA	0.297	NA	5.6988
1082	1	161721707	161721707	C	T	exonic	DUSP12	NA	synonymous SNV	DUSP12:NM_007240:exon3:c.C510T:p.Y170Y	exonic	ENSG00000081721	NA	synonymous SNV	ENSG00000081721:ENST00000367943:exon3:c.C510T:p.Y170Y	Score=538;Name=lod=204	NA	1q23.3	NA	NA	NA	NA	rs1063178	0.36	0.36	0.367	0.360024	0.2922	0.4831	0.2464	0.407	0.32	0.29	0.47	0.29	0.39	0.3399	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.500102	NA	NA	0.33593	0.389242	NA	0.275	NA	5.6986366
1082	16	58757683	58757683	A	G	exonic	GOT2	NA	synonymous SNV	GOT2:NM_002080:exon2:c.T213C:p.N71N	exonic	ENSG00000125166	NA	synonymous SNV	ENSG00000125166:ENST00000245206:exon2:c.T213C:p.N71N,ENSG00000125166:ENST00000434819:exon2:c.T213C:p.N71N	Score=704;Name=lod=964	NA	16q21	Score=900;Name=V$GATA1_03	NA	NA	NA	rs257636	0.67	0.67	0.676	0.689497	0.661	0.6032	0.7594	0.8238	0.5767	0.63	0.58	0.74	0.8	0.6585	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.09112	NA	NA	0.648837	0.790264	NA	0.775	NA	5.6983296
1082	17	39684410	39684410	G	A	exonic	KRT19	NA	synonymous SNV	KRT19:NM_002276:exon1:c.C90T:p.A30A	exonic	ENSG00000171345	NA	synonymous SNV	ENSG00000171345:ENST00000361566:exon1:c.C90T:p.A30A,ENSG00000171345:ENST00000455635:exon1:c.C90T:p.A30A	NA	NA	17q21.2	NA	Name=c-Myc,ZNF263,Pol2-4H8,Pol2	NA	NA	rs11550883	0.68	0.68	0.642	0.684105	0.6402	0.9177	0.7709	0.4183	0.7863	0.63	0.93	0.72	0.42	0.689	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.432907	1.432907	NA	0.639427	0.481535	ID=COSM436587;OCCURENCE=1(breast)	0.674	CLINSIG=untested;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000056950.1;CLNDSDB=.;CLNDSDBID=.	5.6980396
1082	9	130660232	130660232	T	C	intronic	ST6GALNAC6	NA	NA	NA	intronic	ENSG00000160408	NA	NA	NA	Score=540;Name=lod=209	NA	9q34.11	NA	Name=ZNF263,USF-1	NA	NA	rs3758330	0.09	0.09	0.081	0.114018	0.0805	0.1488	0.0821	0.0446	0.229	0.08	0.15	0.07	0.07	0.1292	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.622866	2.622866	NA	0.092463	0.047435	NA	0.058	NA	5.697837
1082	6	47682604	47682604	A	C	exonic	GPR115	NA	nonsynonymous SNV	GPR115:NM_153838:exon6:c.A1623C:p.K541N	exonic	ENSG00000153294	NA	nonsynonymous SNV	ENSG00000153294:ENST00000283303:exon6:c.A1623C:p.K541N,ENSG00000153294:ENST00000327753:exon6:c.A1623C:p.K541N,ENSG00000153294:ENST00000371220:exon7:c.A1794C:p.K598N	NA	NA	6p12.3	NA	NA	NA	NA	rs9369738	0.83	0.83	0.814	0.824481	0.8867	0.8671	0.8991	0.6831	0.8548	0.87	0.87	0.9	0.68	0.8637	0.9	0.57	T	0.294	B	0.151	B	0.016	N	1.000	P	0.335	N	0.86	T	-1.018	T	0.018	T	0.008	-0.356	2.32	-1.48	-0.452	-1.706	0.830	-0.355831	NA	0.45	0.885116	0.70404	NA	0.797	NA	5.6978174
1082	22	18084033	18084033	C	T	intronic	ATP6V1E1	NA	NA	NA	intronic	ENSG00000131100	NA	NA	NA	NA	NA	22q11.21	NA	Name=GATA3_(SC-268),GATA-2	Name=16	NA	rs3747023	0.3	0.3	0.308	0.281949	0.3022	0.2113	0.2896	0.4107	0.1544	0.3	0.2	0.3	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.372268	NA	NA	NA	NA	NA	0.355	NA	5.6978
1082	3	187447032	187447032	G	A	exonic	BCL6	NA	synonymous SNV	BCL6:NM_001134738:exon4:c.C1161T:p.N387N,BCL6:NM_001130845:exon5:c.C1161T:p.N387N,BCL6:NM_001706:exon5:c.C1161T:p.N387N	exonic	ENSG00000113916	NA	synonymous SNV	ENSG00000113916:ENST00000450123:exon4:c.C1161T:p.N387N,ENSG00000113916:ENST00000232014:exon5:c.C1161T:p.N387N,ENSG00000113916:ENST00000406870:exon5:c.C1161T:p.N387N	Score=618;Name=lod=432	NA	3q27.3	Score=850;Name=V$MRF2_01	NA	NA	NA	rs1056932	0.61	0.61	0.563	0.565296	0.672	0.7956	0.7536	0.1104	0.6994	0.66	0.84	0.74	0.17	0.6435	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.560869	NA	NA	0.654419	0.190876	NA	0.601	NA	5.6967476
1082	10	65225450	65225450	C	T	ncRNA_exonic	JMJD1C-AS1	NA	NA	NA	UTR5	ENSG00000171988	ENST00000399262:c.-28G>A,ENST00000399251:c.-248463G>A	NA	NA	NA	NA	10q21.3	NA	Name=Pol2-4H8,YY1,YY1_(C-20)	Name=144	NA	rs1054693	0.14	0.14	0.148	0.117412	0.2873	0.0149	0.1556	0.025	0.1462	0.31	0.01	0.16	0.03	0.2407	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.392407	2.392407	NA	0.276056	0.047465	NA	0.123	NA	5.695944
1082	3	184299167	184299167	T	C	exonic	EPHB3	NA	synonymous SNV	EPHB3:NM_004443:exon15:c.T2859C:p.S953S	exonic	ENSG00000182580	NA	synonymous SNV	ENSG00000182580:ENST00000330394:exon15:c.T2859C:p.S953S	Score=505;Name=lod=150	NA	3q27.1	NA	NA	NA	NA	rs1138510	0.32	0.32	0.328	0.33147	0.3469	0.1677	0.2435	0.5499	0.2515	0.32	0.17	0.28	0.54	0.3079	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.123418	NA	NA	0.316047	0.524739	NA	0.355	NA	5.6958196
1082	10	12154833	12154833	C	T	intronic	DHTKD1	NA	NA	NA	intronic	ENSG00000181192	NA	NA	NA	NA	NA	10p14	NA	Name=PU.1,NFKB	Name=16	NA	rs1701470	0.42	0.42	0.391	0.416134	0.3042	0.498	0.4827	0.5968	0.1554	0.3	0.49	0.44	0.52	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.10927	NA	NA	NA	NA	NA	0.391	NA	5.6958
1082	9	138515929	138515929	G	T	UTR3	GLT6D1	NM_182974:c.*14C>A	NA	NA	UTR3	ENSG00000204007	ENST00000371763:c.*14C>A	NA	NA	Score=378;Name=lod=46	NA	9q34.3	NA	Name=STAT3	NA	NA	rs12336965	0.21	0.21	0.21	0.222644	0.2018	0.2202	0.2363	0.264	0.181	0.19	0.21	0.23	0.23	0.2211	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.079788	NA	NA	0.214913	0.241453	NA	0.239	NA	5.6955204
1083	12	112667675	112667675	T	G	exonic	HECTD4	NA	synonymous SNV	HECTD4:NM_001109662:exon41:c.A5944C:p.R1982R	exonic	ENSG00000173064	NA	synonymous SNV	ENSG00000173064:ENST00000377560:exon40:c.A5830C:p.R1944R,ENSG00000173064:ENST00000430131:exon40:c.A5080C:p.R1694R,ENSG00000173064:ENST00000550722:exon41:c.A5908C:p.R1970R	Score=454;Name=lod=93	NA	12q24.13	NA	NA	NA	NA	rs1005902	0.6	0.6	0.599	0.628195	0.2614	0.8899	0.4078	0.8502	0.592	0.26	0.91	0.46	0.86	0.4421	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.47264	1.47264	NA	0.268177	0.749224	NA	0.58	NA	5.6949896
1083	22	41460489	41460489	C	T	intergenic	RBX1,MIR1281	dist=91470;dist=28028	NA	NA	ncRNA_exonic	ENSG00000237214	NA	NA	NA	Score=767;Name=lod=1742	NA	22q13.2	NA	Name=CTCF_(SC-5916)	NA	NA	rs9611487	0.23	0.23	0.125	0.242412	0.3052	0.0536	0.5288	0.1059	0.3538	0.31	0.06	0.51	0.11	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.9366	NA	NA	NA	NA	NA	0.297	NA	5.6948
1083	17	2966273	2966273	G	A	exonic	OR1D5	NA	nonsynonymous SNV	OR1D5:NM_014566:exon1:c.C629T:p.P210L	exonic	ENSG00000262628	NA	nonsynonymous SNV	ENSG00000262628:ENST00000575751:exon1:c.C629T:p.P210L	NA	NA	17p13.3	NA	NA	NA	NA	rs2676567	NA	NA	NA	0.271166	0.331	0.0228	0.2968	0.3843	0.2945	NA	NA	NA	NA	0.3078	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.329006	1.329006	0.03	NA	NA	NA	NA	NA	5.6945334
1083	19	49540093	49540093	A	C	UTR5	CGB1	NM_033377:c.-125T>G	NA	NA	UTR5	ENSG00000267335,ENSG00000267631	ENST00000591656:c.-13260T>G,ENST00000604577:c.-125T>G;ENST00000601167:c.-560T>G	NA	NA	NA	NA	19q13.33	NA	Name=EBF1_(C-8),CTCF,Rad21,TCF4,SP1,CTCFL_(SC-98982),NF-YA,CTCF_(C-20),c-Fos,JunD	Name=24	NA	rs10853805	0.62	0.62	0.608	0.649161	0.6392	0.379	0.6455	0.8933	0.6104	0.63	0.38	0.64	0.88	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.280851	NA	NA	NA	NA	NA	0.746	NA	5.6941334
1083	17	33510656	33510656	A	G	intronic	UNC45B	NA	NA	NA	intronic	ENSG00000141161	NA	NA	NA	NA	NA	17q12	NA	Name=EBF1_(C-8),EBF	Name=9	NA	rs8074705	0.3	0.3	0.299	0.279952	0.3062	0.2579	0.2291	0.3321	0.2413	0.32	0.28	0.24	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.296612	NA	NA	NA	NA	ID=COSN165391;OCCURENCE=1(NS)	0.341	NA	5.6938
1083	17	41245466	41245466	G	A	exonic	BRCA1	NA	synonymous SNV	BRCA1:NM_007297:exon9:c.C1941T:p.S647S,BRCA1:NM_007294:exon10:c.C2082T:p.S694S,BRCA1:NM_007300:exon10:c.C2082T:p.S694S	exonic	ENSG00000012048	NA	synonymous SNV	ENSG00000012048:ENST00000309486:exon9:c.C1194T:p.S398S,ENSG00000012048:ENST00000493795:exon9:c.C1941T:p.S647S,ENSG00000012048:ENST00000346315:exon10:c.C2082T:p.S694S,ENSG00000012048:ENST00000354071:exon10:c.C2082T:p.S694S,ENSG00000012048:ENST00000357654:exon10:c.C2082T:p.S694S,ENSG00000012048:ENST00000471181:exon10:c.C2082T:p.S694S	NA	NA	17q21.31	NA	NA	NA	NA	rs1799949	0.32	0.32	0.302	0.336462	0.3002	0.371	0.353	0.2103	0.4969	0.36	0.33	0.4	0.22	0.3483	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.619748	NA	NA	0.324419	0.239555	ID=COSM148280;OCCURENCE=1(stomach)	0.275	CLINSIG=non-pathogenic|untested|non-pathogenic|non-pathogenic;CLNDBN=Breast-ovarian_cancer\x2c_familial_1|Familial_cancer_of_breast|not_provided|Neoplastic_Syndromes\x2c_Hereditary;CLNREVSTAT=mult|not|single|single;CLNACC=RCV000111763.2|RCV000114984.1|RCV000123900.1|RCV000128966.1;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet|GeneReviews:MedGen:OMIM:SNOMED_CT|.|MedGen;CLNDSDBID=NBK1247:C2676676:604370:ORPHA145|NBK1247:C0346153:114480:254843006|.|C0027672	5.6937476
1083	12	7967076	7967076	A	G	exonic	SLC2A14	NA	synonymous SNV	SLC2A14:NM_153449:exon12:c.T1399C:p.L467L	exonic	ENSG00000173262	NA	synonymous SNV	ENSG00000173262:ENST00000542505:exon5:c.T322C:p.L108L,ENSG00000173262:ENST00000542546:exon8:c.T1072C:p.L358L,ENSG00000173262:ENST00000535295:exon10:c.T1072C:p.L358L,ENSG00000173262:ENST00000539924:exon10:c.T1444C:p.L482L,ENSG00000173262:ENST00000431042:exon11:c.T1330C:p.L444L,ENSG00000173262:ENST00000396589:exon12:c.T1399C:p.L467L,ENSG00000173262:ENST00000340749:exon13:c.T1330C:p.L444L,ENSG00000173262:ENST00000543909:exon16:c.T1399C:p.L467L	Score=325;Name=lod=28	NA	12p13.31	NA	NA	NA	NA	rs10845983	0.21	0.21	0.163	0.209465	0.338	0.1181	0.3674	0.0204	0.3149	0.33	0.12	0.34	0.04	0.298	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.493617	NA	NA	0.336977	0.075579	NA	0.174	NA	5.6936896
1083	1	144931727	144931727	G	A	UTR5	PDE4DIP	NM_001002811:c.-19C>T	NA	NA	UTR5	ENSG00000178104	ENST00000313431:c.-19C>T,ENST00000529945:c.-19C>T	NA	NA	NA	NA	1q21.1	NA	Name=BAF155,BAF170,ZNF263,GATA3_(SC-268),GATA-2,Pol2	Name=134	NA	rs2985363	0.28	0.28	0.253	NA	NA	NA	NA	NA	NA	0.34	0.07	0.27	0.45	0.309	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.722353	NA	NA	0.330886	0.412944	NA	0.188	NA	5.6934474
1083	11	6530278	6530278	C	T	exonic	DNHD1	NA	synonymous SNV	DNHD1:NM_173589:exon4:c.C1089T:p.F363F,DNHD1:NM_144666:exon5:c.C1089T:p.F363F	exonic	ENSG00000179532	NA	synonymous SNV	ENSG00000179532:ENST00000527990:exon3:c.C1089T:p.F363F,ENSG00000179532:ENST00000354685:exon4:c.C1089T:p.F363F,ENSG00000179532:ENST00000254579:exon5:c.C1089T:p.F363F	Score=422;Name=lod=69	NA	11p15.4	NA	NA	NA	NA	rs10839568	0.24	0.24	0.217	0.219249	0.3519	0.128	0.3199	0.1377	0.2157	0.34	0.15	0.33	0.13	0.2925	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.328876	1.328876	NA	0.329493	0.166515	NA	0.268	NA	5.6927736
1083	6	26056549	26056549	A	G	exonic	HIST1H1C	NA	synonymous SNV	HIST1H1C:NM_005319:exon1:c.T108C:p.S36S	exonic	ENSG00000187837	NA	synonymous SNV	ENSG00000187837:ENST00000343677:exon1:c.T108C:p.S36S	NA	NA	6p22.2	NA	Name=TCF12,Nrf1,USF-1,GATA2_(CG2-96),BATF,CHD2_(N-1250),c-Myc,CCNT2,ELF1_(SC-631),AP-2gamma,NFKB,HEY1,BCL3,ZEB1_(SC-25388),POU5F1_(SC-9081),PAX5-N19,Oct-2,GCN5,Pol2,SP1,NRSF,YY1,Pol2(phosphoS2),MEF2C_(SC-13268),Egr-1,Sin3Ak-20,YY1_(C-20),BCLAF1_(M33-P5B11),TAF7_(SQ-8),Pol2-4H8,TR4,FOSL2,JunD,TAF1,Pol2(b),GATA-1,ETS1,p300_(F-4),SP2_(SC-643),POU2F2,HMGN3,USF2,GABP,ZBTB33	Name=148	NA	rs10425	0.76	0.76	0.737	0.760783	0.6372	0.8552	0.6744	0.9281	0.6258	0.63	0.89	0.66	0.9	0.6806	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.072133	NA	NA	0.656977	0.884249	NA	0.739	NA	5.6918896
1083	19	51133356	51133356	C	G	exonic	SYT3	NA	synonymous SNV	SYT3:NM_032298:exon3:c.G747C:p.R249R,SYT3:NM_001160328:exon5:c.G747C:p.R249R,SYT3:NM_001160329:exon5:c.G747C:p.R249R	exonic	ENSG00000213023	NA	synonymous SNV	ENSG00000213023:ENST00000338916:exon3:c.G747C:p.R249R,ENSG00000213023:ENST00000544769:exon5:c.G747C:p.R249R,ENSG00000213023:ENST00000593901:exon5:c.G747C:p.R249R,ENSG00000213023:ENST00000600079:exon5:c.G747C:p.R249R	Score=395;Name=lod=54	NA	19q13.33	Score=925;Name=V$E47_01	NA	NA	NA	rs10407511	0.58	0.58	0.596	0.595048	0.6879	0.1696	0.7176	0.8585	0.4949	0.67	0.17	0.7	0.83	0.6203	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.8616	NA	NA	0.666628	0.807081	NA	0.42	NA	5.6918386
1083	3	39449770	39449770	T	G	intronic	RPSA	NA	NA	NA	intronic	ENSG00000168028	NA	NA	NA	NA	NA	3p22.1	NA	Name=Pol2	Name=49	NA	rs3772140	0.26	0.26	0.243	0.250799	0.3082	0.2778	0.3084	0.152	0.2566	0.3	0.28	0.3	0.14	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.240101	NA	NA	NA	NA	NA	0.225	NA	5.6918
1083	3	39452106	39452106	A	G	intronic	RPSA	NA	NA	NA	intronic	ENSG00000168028	NA	NA	NA	NA	NA	3p22.1	NA	Name=Pol2	Name=14	NA	rs2077798	0.26	0.26	0.235	0.250799	0.3082	0.2778	0.3084	0.152	0.2566	0.3	0.28	0.3	0.14	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.055478	NA	NA	NA	NA	NA	0.225	NA	5.6918
1083	3	186965268	186965268	A	G	intronic	MASP1	NA	NA	NA	intronic	ENSG00000127241	NA	NA	NA	Score=491;Name=lod=132	NA	3q27.3	NA	NA	Name=13	NA	rs3774275	0.25	0.25	0.224	0.240615	0.3082	0.4177	0.1585	0.0212	0.3436	0.32	0.39	0.19	0.03	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.241244	4.241244	NA	NA	NA	NA	0.159	NA	5.6918
1083	11	59259637	59259637	A	C	intergenic	OR4D10,OR4D11	dist=13799;dist=11412	NA	NA	ncRNA_exonic	ENSG00000204989	NA	NA	NA	Score=361;Name=lod=39	NA	11q12.1	Score=889;Name=V$GR_Q6	NA	NA	NA	rs10896979	0.34	0.34	0.342	0.366014	0.3082	0.2758	0.2406	0.5197	0.3998	0.3	0.26	0.27	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.862089	NA	NA	NA	NA	NA	0.449	NA	5.6918
1083	21	45276007	45276007	G	T	intergenic	LOC284837,AGPAT3	dist=43559;dist=9109	NA	NA	ncRNA_exonic	ENSG00000226543	NA	NA	NA	Score=652;Name=lod=597	NA	21q22.3	NA	NA	Name=2	NA	rs11702314	0.35	0.35	0.313	0.322684	0.3082	0.5069	0.379	0.1679	0.317	0.31	0.5	0.41	0.17	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.923484	NA	NA	NA	NA	NA	0.428	NA	5.6918
1083	10	11789405	11789405	G	A	exonic	ECHDC3	NA	synonymous SNV	ECHDC3:NM_024693:exon2:c.G228A:p.K76K	exonic	ENSG00000134463	NA	synonymous SNV	ENSG00000134463:ENST00000422887:exon1:c.G9A:p.K3K,ENSG00000134463:ENST00000379215:exon2:c.G228A:p.K76K,ENSG00000134463:ENST00000420401:exon2:c.G387A:p.K129K	Score=437;Name=lod=80	NA	10p14	NA	Name=GR	Name=26	NA	rs4750091	0.94	0.94	0.921	0.922324	0.998	1	0.9769	0.7201	0.999	1	1	0.98	0.74	0.9786	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.725488	NA	NA	0.998837	0.779392	NA	0.906	NA	5.6912296
1083	12	49582692	49582692	T	G	UTR5	TUBA1A	NM_001270400:c.-2178A>C,NM_001270399:c.-490A>C	NA	NA	UTR5	ENSG00000167552	ENST00000552924:c.-2178A>C	NA	NA	NA	NA	12q13.12	NA	Name=YY1,Pol2(b),NFKB,HEY1,Pol2,YY1_(C-20),POU2F2,Rad21,Oct-2	Name=135	NA	rs1039225	0.42	0.42	0.368	0.410743	0.332	0.6835	0.3242	0.2194	0.5307	0.33	0.73	0.36	0.24	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.687433	NA	NA	0.310182	0.223988	NA	0.355	NA	5.6911514
1083	3	133474328	133474328	G	A	exonic	TF	NA	synonymous SNV	TF:NM_001063:exon5:c.G624A:p.S208S	exonic	ENSG00000091513	NA	synonymous SNV	ENSG00000091513:ENST00000264998:exon4:c.G243A:p.S81S,ENSG00000091513:ENST00000482271:exon4:c.G243A:p.S81S,ENSG00000091513:ENST00000402696:exon5:c.G624A:p.S208S	NA	NA	3q22.1	NA	NA	Name=3	NA	rs12769	0.31	0.31	0.258	0.311302	0.3211	0.4454	0.3775	0.087	0.4192	0.32	0.47	0.33	0.08	0.3305	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.322868	NA	NA	0.32407	0.134362	NA	0.196	NA	5.6909966
1083	10	105819956	105819956	G	A	exonic	COL17A1	NA	synonymous SNV	COL17A1:NM_000494:exon14:c.C1062T:p.A354A	exonic	ENSG00000065618	NA	synonymous SNV	ENSG00000065618:ENST00000353479:exon14:c.C1062T:p.A354A,ENSG00000065618:ENST00000369733:exon14:c.C1062T:p.A354A,ENSG00000065618:ENST00000393211:exon14:c.C1062T:p.A354A	Score=557;Name=lod=244	NA	10q25.1	NA	Name=NRSF	NA	NA	rs805701	0.59	0.59	0.547	0.552516	0.6551	0.6875	0.6902	0.2519	0.6166	0.66	0.71	0.69	0.25	0.6473	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.114846	NA	NA	0.673953	0.323423	NA	0.601	NA	5.6903136
1083	11	9749645	9749645	A	C	exonic	SWAP70	NA	synonymous SNV	SWAP70:NM_015055:exon5:c.A688C:p.R230R	exonic	ENSG00000133789	NA	synonymous SNV	ENSG00000133789:ENST00000534662:exon3:c.A241C:p.R81R,ENSG00000133789:ENST00000447399:exon4:c.A514C:p.R172R,ENSG00000133789:ENST00000318950:exon5:c.A688C:p.R230R	Score=672;Name=lod=719	NA	11p15.4	NA	NA	NA	NA	rs397686	0.27	0.27	0.274	0.258586	0.3211	0.1726	0.183	0.3306	0.2393	0.33	0.19	0.22	0.31	0.3061	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.640727	1.640727	NA	0.349558	0.335984	NA	0.384	NA	5.6899086
1083	12	6954875	6954875	C	T	exonic	GNB3	NA	synonymous SNV	GNB3:NM_002075:exon10:c.C825T:p.S275S	exonic	ENSG00000111664	NA	synonymous SNV	ENSG00000111664:ENST00000537035:exon8:c.C702T:p.S234S,ENSG00000111664:ENST00000435982:exon9:c.C822T:p.S274S,ENSG00000111664:ENST00000229264:exon10:c.C825T:p.S275S	NA	NA	12p13.31	Score=703;Name=V$HOX13_01	NA	NA	NA	rs5443	0.48	0.48	0.488	0.492212	0.3072	0.503	0.379	0.8192	0.3098	0.31	0.47	0.42	0.79	0.3598	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.507925	NA	NA	0.310116	0.722424	ID=COSM147403;OCCURENCE=1(stomach)	0.442	NA	5.6895506
1083	19	9057687	9057687	A	G	exonic	MUC16	NA	nonsynonymous SNV	MUC16:NM_024690:exon3:c.T29759C:p.I9920T	exonic	ENSG00000181143	NA	nonsynonymous SNV	ENSG00000181143:ENST00000397910:exon3:c.T29759C:p.I9920T	NA	NA	19p13.2	NA	NA	NA	NA	rs1895364	0.86	0.86	0.866	0.858626	0.8738	0.8542	0.8991	0.8321	0.8548	0.88	0.88	0.89	0.8	0.8719	0.9	0	D	0.0	B	0.0	B	.	.	.	.	.	.	4.61	T	-1.091	T	0.000	T	0.013	-0.126	3.385	0.023	-0.197	-0.531	2.292	-0.125612	NA	0.4	0.898197	0.85625	NA	0.899	NA	5.6894364
1083	22	22533623	22533623	C	G	intergenic	TOP3B,VPREB1	dist=196476;dist=65577	NA	NA	ncRNA_exonic	ENSG00000254308	NA	NA	NA	Score=358;Name=lod=38	NA	22q11.22	NA	Name=PU.1,MafF_(M8194),MafK_(SC-477),ELF1_(SC-631),MafK_(ab50322)	NA	NA	rs5750675	0.45	0.45	0.413	0.452875	0.3111	0.6756	0.4769	0.3215	0.5297	0.31	0.7	0.45	0.37	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.397478	1.397478	NA	NA	NA	NA	0.319	NA	5.6889
1083	3	186953808	186953808	C	T	exonic	MASP1	NA	synonymous SNV	MASP1:NM_139125:exon11:c.G1851A:p.L617L	exonic	ENSG00000127241	NA	synonymous SNV	ENSG00000127241:ENST00000392472:exon10:c.G1512A:p.L504L,ENSG00000127241:ENST00000296280:exon11:c.G1851A:p.L617L	NA	NA	3q27.3	Score=842;Name=V$TAL1BETAITF2_01	NA	NA	NA	rs850312	0.24	0.24	0.202	0.211861	0.3479	0.2034	0.3473	0.0265	0.2352	0.34	0.2	0.35	0.04	0.2908	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.038449	NA	NA	0.339302	0.067862	ID=COSM149542;OCCURENCE=1(stomach)	0.196	NA	5.6886646
1083	19	37642917	37642917	G	A	exonic	ZNF585A	NA	synonymous SNV	ZNF585A:NM_152655:exon6:c.C1719T:p.H573H,ZNF585A:NM_199126:exon6:c.C1719T:p.H573H	exonic	ENSG00000196967	NA	synonymous SNV	ENSG00000196967:ENST00000356958:exon5:c.C1884T:p.H628H,ENSG00000196967:ENST00000292841:exon6:c.C1719T:p.H573H,ENSG00000196967:ENST00000392157:exon6:c.C1719T:p.H573H	Score=391;Name=lod=52	NA	19q13.12	NA	NA	NA	NA	rs4806415	0.5	0.5	0.47	0.502995	0.497	0.1944	0.5778	0.8086	0.3609	0.51	0.19	0.59	0.8	0.4825	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.223327	NA	NA	NA	NA	NA	0.246	NA	5.6871666
1083	11	3993231	3993231	A	G	intronic	STIM1	NA	NA	NA	intronic	ENSG00000167323	NA	NA	NA	Score=641;Name=lod=539	NA	11p15.4	NA	NA	Name=67	NA	rs10835407	0.24	0.24	0.214	0.258786	0.3131	0.3204	0.2767	0.0272	0.4397	0.32	0.3	0.24	0.02	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.052939	NA	NA	NA	NA	NA	0.232	NA	5.6869
1083	19	39996027	39996027	C	T	exonic	DLL3	NA	synonymous SNV	DLL3:NM_016941:exon6:c.C1029T:p.P343P,DLL3:NM_203486:exon6:c.C1029T:p.P343P	exonic	ENSG00000090932	NA	synonymous SNV	ENSG00000090932:ENST00000205143:exon6:c.C1029T:p.P343P,ENSG00000090932:ENST00000356433:exon6:c.C1029T:p.P343P	Score=562;Name=lod=256	NA	19q13.2	NA	NA	NA	NA	rs2304214	0.23	0.23	0.225	0.242013	0.3429	0.1468	0.2608	0.1377	0.364	0.34	0.11	0.28	0.15	0.3041	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.392028	1.392028	NA	0.332907	0.182705	NA	0.188	NA	5.6867596
1083	6	31084163	31084163	A	G	exonic	CDSN	NA	nonsynonymous SNV	CDSN:NM_001264:exon2:c.T1229C:p.L410S	exonic	ENSG00000204539	NA	nonsynonymous SNV	ENSG00000204539:ENST00000376288:exon2:c.T1229C:p.L410S	NA	NA	6p21.33	NA	NA	NA	NA	rs3132554	0.62	0.62	0.605	0.646965	0.5487	0.7113	0.6138	0.7065	0.6247	0.53	0.68	0.62	0.68	0.5897	0.68	0.98	T	.	.	.	.	0.825	N	1.000	P	.	.	3.49	T	-0.940	T	0.002	T	0.033	-2.11	0.006	1.42	0.779	0.518	3.661	-2.110122	NA	1	0.508256	0.662279	NA	0.529	NA	5.6866774
1083	1	184801065	184801065	T	C	exonic	FAM129A	NA	synonymous SNV	FAM129A:NM_052966:exon6:c.A633G:p.Q211Q	exonic	ENSG00000135842	NA	synonymous SNV	ENSG00000135842:ENST00000367511:exon6:c.A633G:p.Q211Q	Score=592;Name=lod=338	NA	1q25.3	NA	NA	NA	NA	rs487675	0.29	0.29	0.302	0.283746	0.3429	0.1558	0.2363	0.3812	0.2566	0.33	0.18	0.27	0.37	0.2969	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.145802	NA	NA	0.340349	0.366773	ID=COSM1337073;OCCURENCE=1(large_intestine)	0.268	NA	5.6865176
1083	14	94524216	94524216	T	C	exonic	DDX24	NA	synonymous SNV	DDX24:NM_020414:exon6:c.A1941G:p.A647A	exonic	ENSG00000089737	NA	synonymous SNV	ENSG00000089737:ENST00000544005:exon5:c.A1191G:p.A397A,ENSG00000089737:ENST00000330836:exon6:c.A1941G:p.A647A,ENSG00000089737:ENST00000555054:exon6:c.A1812G:p.A604A	NA	NA	14q32.12	Score=707;Name=V$BRACH_01	NA	NA	NA	rs1056810	0.33	0.33	0.285	0.294329	0.3211	0.3264	0.4467	0.1884	0.2689	0.33	0.38	0.4	0.22	0.3271	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.309708	1.309708	NA	0.331977	0.231502	ID=COSM1162346;OCCURENCE=1(pancreas)	0.319	NA	5.6864896
1083	14	88935925	88935925	A	G	exonic	PTPN21	NA	synonymous SNV	PTPN21:NM_007039:exon17:c.T3153C:p.T1051T	exonic	ENSG00000070778	NA	synonymous SNV	ENSG00000070778:ENST00000553531:exon1:c.T36C:p.T12T,ENSG00000070778:ENST00000328736:exon16:c.T3153C:p.T1051T,ENSG00000070778:ENST00000556564:exon17:c.T3153C:p.T1051T	Score=569;Name=lod=275	NA	14q31.3	NA	NA	NA	NA	rs2297129	0.37	0.37	0.364	0.395168	0.2962	0.38	0.2781	0.5219	0.4243	0.31	0.36	0.28	0.52	0.3431	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.573774	NA	NA	0.34093	0.506355	NA	0.471	NA	5.6864366
1083	2	86979093	86979093	G	A	exonic	RMND5A	NA	synonymous SNV	RMND5A:NM_022780:exon3:c.G360A:p.E120E	exonic	ENSG00000153561	NA	synonymous SNV	ENSG00000153561:ENST00000283632:exon3:c.G360A:p.E120E	Score=578;Name=lod=297	NA	2p11.2	Score=725;Name=V$PPARG_02	NA	NA	NA	rs10186663	0.72	0.72	0.683	0.689696	0.664	0.9058	0.696	0.615	0.59	0.66	0.91	0.68	0.62	0.666	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.237441	1.237441	NA	0.650233	0.657739	NA	0.529	NA	5.6864336
1083	1	205238275	205238275	A	G	exonic	TMCC2	NA	synonymous SNV	TMCC2:NM_001242925:exon3:c.A711G:p.A237A,TMCC2:NM_014858:exon3:c.A945G:p.A315A	exonic	ENSG00000133069	NA	synonymous SNV	ENSG00000133069:ENST00000329800:exon2:c.A225G:p.A75A,ENSG00000133069:ENST00000330675:exon2:c.A270G:p.A90A,ENSG00000133069:ENST00000358024:exon3:c.A945G:p.A315A,ENSG00000133069:ENST00000367159:exon3:c.A357G:p.A119A,ENSG00000133069:ENST00000545499:exon3:c.A711G:p.A237A	NA	NA	1q32.1	Score=811;Name=V$HTF_01	NA	NA	NA	rs1768586	0.2	0.2	0.184	0.14976	0.3549	0.0516	0.1902	0.1036	0.0736	0.36	0.05	0.23	0.1	0.2718	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.280368	NA	NA	0.354767	0.148661	NA	0.355	NA	5.6851996
1083	19	9059808	9059808	A	G	exonic	MUC16	NA	nonsynonymous SNV	MUC16:NM_024690:exon3:c.T27638C:p.I9213T	exonic	ENSG00000181143	NA	nonsynonymous SNV	ENSG00000181143:ENST00000397910:exon3:c.T27638C:p.I9213T	NA	NA	19p13.2	NA	NA	NA	NA	rs7508222	0.86	0.86	0.859	0.857029	0.8767	0.8522	0.9006	0.826	0.8528	0.88	0.88	0.89	0.79	0.8726	0.9	0	D	0.0	B	0.0	B	.	.	.	.	.	.	2.19	T	-1.067	T	0.000	T	0.016	-0.344	2.372	-0.027	0.073	-0.735	4.803	-0.344116	NA	0.75	0.898918	0.847011	NA	0.899	NA	5.6851154
1084	16	58575489	58575489	G	A	exonic	CNOT1	NA	synonymous SNV	CNOT1:NM_001265612:exon34:c.C4701T:p.Y1567Y,CNOT1:NM_016284:exon34:c.C4716T:p.Y1572Y	exonic	ENSG00000125107	NA	synonymous SNV	ENSG00000125107:ENST00000245138:exon11:c.C1269T:p.Y423Y,ENSG00000125107:ENST00000317147:exon34:c.C4716T:p.Y1572Y,ENSG00000125107:ENST00000567188:exon34:c.C4701T:p.Y1567Y,ENSG00000125107:ENST00000569240:exon34:c.C4701T:p.Y1567Y	Score=696;Name=lod=901	NA	16q21	NA	NA	NA	NA	rs11540994	0.46	0.46	0.485	0.485224	0.3211	0.5704	0.2983	0.6687	0.4509	0.32	0.59	0.3	0.66	0.3684	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.872197	NA	NA	0.292558	0.604641	NA	0.391	NA	5.6846086
1084	3	195426149	195426149	G	A	upstream	MIR570	NA	NA	NA	ncRNA_intronic	ENSG00000242086	NA	NA	NA	NA	NA	3q29	NA	Name=eGFP-JunD	Name=31	NA	rs4997080	0.4	0.4	0.14	0.466853	0.4821	0.4593	0.4236	0.5272	0.408	0.38	0.4	0.39	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.323038	NA	NA	NA	NA	NA	NA	NA	5.6845666
1084	21	38444995	38444995	A	G	UTR5	PIGP	NM_153681:c.-108T>C	NA	NA	UTR5	ENSG00000185808	ENST00000464265:c.-108T>C,ENST00000430792:c.-547T>C	NA	NA	NA	NA	21q22.13	NA	Name=TBP,c-Myc,CCNT2,HEY1,AP-2gamma,HA-E2F1,E2F1,Pol2-4H8,Egr-1,Ini1,YY1_(C-20),E2F6,Pol2,HMGN3,E2F6_(H-50),TAF1	Name=136	NA	rs7280542	0.63	0.63	0.59	0.598442	0.6491	0.4643	0.7118	0.7141	0.4479	0.66	0.45	0.71	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.208302	NA	NA	NA	NA	NA	0.609	NA	5.6842334
1084	2	15601441	15601441	C	T	exonic	NBAS	NA	synonymous SNV	NBAS:NM_015909:exon21:c.G2223A:p.L741L	exonic	ENSG00000151779	NA	synonymous SNV	ENSG00000151779:ENST00000281513:exon21:c.G2223A:p.L741L,ENSG00000151779:ENST00000441750:exon21:c.G2223A:p.L741L	Score=523;Name=lod=178	NA	2p24.3	Score=832;Name=V$TST1_01	NA	NA	NA	rs7590340	0.53	0.53	0.521	0.523562	0.6938	0.2222	0.6254	0.5567	0.5419	0.67	0.26	0.64	0.56	0.6049	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.425715	NA	NA	0.683953	0.581707	NA	0.667	NA	5.6840136
1084	5	55571586	55571586	A	G	intergenic	ANKRD55,MAP3K1	dist=42400;dist=539314	NA	NA	ncRNA_exonic	ENSG00000248781	NA	NA	NA	Score=836;Name=lod=3324	NA	5q11.2	NA	NA	Name=6	NA	rs6895344	0.29	0.29	0.291	0.299321	0.3161	0.2887	0.3141	0.2126	0.3998	0.32	0.32	0.3	0.22	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.152119	NA	NA	NA	NA	NA	0.297	NA	5.6839
1084	6	32189032	32189032	T	C	exonic	NOTCH4	NA	synonymous SNV	NOTCH4:NM_004557:exon4:c.A522G:p.T174T	exonic	ENSG00000204301	NA	synonymous SNV	ENSG00000204301:ENST00000375023:exon4:c.A522G:p.T174T	NA	NA	6p21.32	Score=902;Name=V$CEBP_C	NA	NA	NA	rs415929	0.28	0.28	0.281	0.279952	0.3519	0.2421	0.2594	0.2088	0.3558	0.34	0.24	0.3	0.22	0.3113	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.1701	NA	NA	0.31986	0.218212	NA	0.355	NA	5.6836066
1084	7	144702790	144702790	A	G	intergenic	TPK1,CNTNAP2	dist=169644;dist=1110663	NA	NA	ncRNA_exonic	ENSG00000236343	NA	NA	NA	Score=741;Name=lod=1364	NA	7q35	NA	Name=MafF_(M8194)	NA	NA	rs10267308	0.29	0.29	0.302	0.291933	0.3171	0.2312	0.1988	0.4266	0.2127	0.32	0.23	0.22	0.37	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.854278	NA	NA	NA	NA	NA	0.239	NA	5.6829
1084	8	11614329	11614329	C	T	intronic	GATA4	NA	NA	NA	intronic	ENSG00000136574	NA	NA	NA	NA	NA	8p23.1	NA	Name=TAL1_(SC-12984),GATA-2,GATA2_(CG2-96),USF-1,GATA-1	Name=7	NA	rs3729854	0.27	0.27	0.232	0.266374	0.3171	0.2659	0.3775	0.1127	0.3436	0.3	0.29	0.41	0.12	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.934453	NA	NA	NA	NA	NA	0.304	NA	5.6829
1084	10	114053546	114053546	C	G	exonic	TECTB	NA	synonymous SNV	TECTB:NM_058222:exon5:c.C534G:p.S178S	exonic	ENSG00000119913	NA	synonymous SNV	ENSG00000119913:ENST00000369422:exon5:c.C534G:p.S178S	NA	NA	10q25.2	Score=828;Name=V$BRN2_01	NA	NA	NA	rs726009	0.56	0.56	0.545	NA	NA	NA	NA	NA	NA	0.44	0.72	0.62	0.52	0.5241	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.789049	NA	NA	0.46	0.556287	NA	0.63	NA	5.6825666
1084	19	18311199	18311199	A	G	exonic	RAB3A	NA	synonymous SNV	RAB3A:NM_002866:exon3:c.T285C:p.A95A	exonic	ENSG00000105649	NA	synonymous SNV	ENSG00000105649:ENST00000222256:exon3:c.T285C:p.A95A,ENSG00000105649:ENST00000481914:exon3:c.T285C:p.A95A	Score=579;Name=lod=301	NA	19p13.11	NA	NA	NA	NA	rs1046565	0.21	0.21	0.183	0.161542	0.3658	0.0923	0.2363	0.0287	0.1493	0.39	0.09	0.25	0.04	0.2791	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.128203	NA	NA	0.339884	0.07626	ID=COSM148533;OCCURENCE=1(stomach),1(large_intestine)	0.138	NA	5.6818826
1084	17	7217944	7217944	G	A	intronic	GPS2	NA	NA	NA	intronic	ENSG00000132522,ENSG00000261915	NA	NA	NA	NA	NA	17p13.1	NA	Name=AP-2gamma,Pol2-4H8,Pol2(b),AP-2alpha	Name=108	NA	rs62059197	0.06	0.06	0.052	0.0373403	0.1243	NA	0.0648	0.0045	0.0112	0.12	NA	0.08	0.01	0.0817	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.258835	NA	NA	0.112442	0.019973	NA	0.022	NA	5.681558
1084	22	31333631	31333631	T	C	exonic	MORC2	NA	synonymous SNV	MORC2:NM_014941:exon16:c.A1251G:p.P417P	exonic	ENSG00000133422	NA	synonymous SNV	ENSG00000133422:ENST00000397641:exon15:c.A1437G:p.P479P,ENSG00000133422:ENST00000215862:exon16:c.A1251G:p.P417P	Score=652;Name=lod=593	NA	22q12.2	NA	NA	NA	NA	rs3747151	0.46	0.46	0.448	0.467851	0.3101	0.6895	0.3458	0.5915	0.3211	0.3	0.62	0.38	0.58	0.3558	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.433952	1.433952	NA	0.319302	0.544031	NA	0.428	NA	5.6814646
1084	1	186277989	186277989	A	G	exonic	PRG4	NA	synonymous SNV	PRG4:NM_001127710:exon4:c.A2736G:p.P912P,PRG4:NM_001127709:exon5:c.A2859G:p.P953P,PRG4:NM_001127708:exon6:c.A3015G:p.P1005P,PRG4:NM_005807:exon7:c.A3138G:p.P1046P	exonic	ENSG00000116690	NA	synonymous SNV	ENSG00000116690:ENST00000367485:exon5:c.A2859G:p.P953P,ENSG00000116690:ENST00000367483:exon6:c.A3015G:p.P1005P,ENSG00000116690:ENST00000367486:exon6:c.A3009G:p.P1003P,ENSG00000116690:ENST00000367484:exon7:c.A1725G:p.P575P,ENSG00000116690:ENST00000445192:exon7:c.A3138G:p.P1046P	NA	NA	1q31.1	NA	NA	Name=2	NA	rs3737940	0.24	0.24	0.216	0.221246	0.33	0.125	0.402	0.1142	0.2249	0.35	0.13	0.39	0.1	0.3016	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.324894	NA	NA	0.353953	0.149342	NA	0.217	NA	5.6811136
1084	1	172011059	172011059	G	A	intronic	DNM3	NA	NA	NA	intronic	ENSG00000197959	NA	NA	NA	NA	NA	1q24.3	NA	Name=CTCF,Rad21,SMC3_(ab9263)	Name=80	NA	rs3736791	0.45	0.45	0.438	0.442093	0.3191	0.622	0.415	0.4637	0.3732	0.33	0.65	0.38	0.45	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.247221	NA	NA	NA	NA	NA	0.514	NA	5.6809
1084	17	8076741	8076741	A	G	UTR3	TMEM107	NM_183065:c.*780T>C,NM_032354:c.*780T>C	NA	NA	UTR3	ENSG00000179029	ENST00000449985:c.*829T>C	NA	NA	NA	NA	17p13.1	NA	Name=Pol2-4H8,E2F1,GATA-2,HDAC2_(SC-6296),KAP1,ZNF263,c-Jun,Sin3Ak-20,Egr-1,YY1,STAT3,RFX5_(N-494),GCN5,FOXA1_(C-20),AP-2alpha,SIRT6,Pol2(b),JunD,FOSL2,eGFP-JunB,GATA2_(CG2-96),TBP,USF-1,TCF12,THAP1_(SC-98174),p300_(N-15),MafK_(ab50322),SIX5,SETDB1,SRF,PAX5-C20,PAX5-N19,HEY1,eGFP-GATA2,BCL3,NFKB,CCNT2,c-Myc,IRF4_(M-17),eGFP-JunD,USF1_(SC-8983),TR4,GATA3_(SC-268),MEF2A,TAF7_(SQ-8),BCL11A,BCLAF1_(M33-P5B11),YY1_(C-20),BRCA1_(C-1863),SMC3_(ab9263),Pol2(phosphoS2),Mxi1_(bHLH),PU.1,NRSF,SP1,Pol2,ZBTB33,MafF_(M8194),HMGN3,POU2F2,p300_(F-4),MafK_(SC-477),CTCFL_(SC-98982),ETS1,GATA-1,TAF1,CHD2_(N-1250),BATF,CEBPB,RXRA,p300,CTCF,Oct-2,HNF4G_(SC-6558),FOXA1_(SC-101058),ELF1_(SC-631),FOSL1_(SC-183),Max,GR	Name=147	NA	rs72479723	0.12	0.12	0.124	0.0994409	0.2247	0.0298	0.1225	0.0469	0.0971	0.23	0.03	0.15	0.05	0.1736	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.580118	NA	NA	0.254144	0.089612	NA	0.08	NA	5.6808894
1084	15	28437061	28437061	A	G	intronic	HERC2	NA	NA	NA	intronic	ENSG00000128731	NA	NA	NA	NA	NA	15q13.1	NA	Name=Rad21,CTCF	Name=93	NA	rs72714143	0.17	0.17	0.162	0.171925	0.1083	0.2927	0.232	0.0862	0.1861	0.1	0.32	0.23	0.08	0.1281	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.140276	NA	NA	0.08281	0.091239	NA	0.123	NA	5.68079
1084	19	9062544	9062544	T	G	exonic	MUC16	NA	nonsynonymous SNV	MUC16:NM_024690:exon3:c.A24902C:p.N8301T	exonic	ENSG00000181143	NA	nonsynonymous SNV	ENSG00000181143:ENST00000397910:exon3:c.A24902C:p.N8301T	NA	NA	19p13.2	NA	NA	NA	NA	rs2547063	0.88	0.88	0.885	0.873602	0.8767	0.8522	0.902	0.8865	0.8548	0.88	0.88	0.89	0.86	0.8769	0.9	0	D	0.0	B	0.0	B	.	.	.	.	.	.	2.34	T	-1.083	T	0.000	T	0.024	0.133	4.717	0.406	-0.066	-0.711	3.061	0.133283	NA	0.7	0.899085	0.890593	NA	0.913	NA	5.6806484
1084	4	69417570	69417570	A	G	exonic	UGT2B17	NA	synonymous SNV	UGT2B17:NM_001077:exon4:c.T1065C:p.Y355Y	exonic	ENSG00000197888	NA	synonymous SNV	ENSG00000197888:ENST00000317746:exon4:c.T1065C:p.Y355Y	Score=461;Name=lod=100	NA	4q13.2	NA	NA	Name=4	NA	rs28374627	0.44	0.44	0.563	0.597444	0.7296	0.7897	0.5274	0.3563	0.6391	0.62	0.32	0.49	0.28	0.6002	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.297752	NA	NA	0.65637	0.391044	NA	0.312	NA	5.6804966
1084	16	3115628	3115628	A	C	UTR5	IL32	NM_001012631:c.-185A>C,NM_001012635:c.-185A>C	NA	NA	UTR5	ENSG00000008517	ENST00000526464:c.-185A>C,ENST00000525643:c.-185A>C,ENST00000528163:c.-185A>C,ENST00000444393:c.-185A>C,ENST00000530890:c.-185A>C,ENST00000533097:c.-185A>C	NA	NA	NA	NA	16p13.3	NA	Name=ZNF263,Pol2-4H8,TBP,HEY1,Pol2	Name=19	NA	rs1554999	0.8	0.8	0.791	0.805711	0.6531	0.9395	0.7925	0.8623	0.7577	0.66	0.96	0.75	0.88	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.063232	NA	NA	NA	NA	NA	0.717	NA	5.6802334
1084	16	58552228	58552228	G	A	intronic	SETD6	NA	NA	NA	intronic	ENSG00000103037	NA	NA	NA	NA	NA	16q21	NA	Name=PU.1	Name=8	NA	rs2280397	0.46	0.46	0.482	0.485024	0.3201	0.5694	0.2939	0.6694	0.454	0.32	0.59	0.29	0.66	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.571765	NA	NA	NA	NA	NA	0.399	NA	5.6799
1084	19	19976701	19976701	A	T	upstream	ZNF253	NA	NA	NA	UTR5	ENSG00000256771	ENST00000592725:c.-14221A>T	NA	NA	NA	NA	19p13.11	NA	Name=Pol2,SP1,NRSF,TAF7_(SQ-8),E2F6,USF1_(SC-8983),TAF1,E2F6_(H-50),NF-YA,POU2F2,USF2,GTF2F1_(RAP-74),CHD2_(N-1250),Max,ELF1_(SC-631),NF-YB,Oct-2,RFX5_(N-494),Sin3Ak-20,ZNF263,c-Fos,Pol2-4H8,Pol2(b),JunD,GTF2B,USF-1,TBP,IRF1,c-Myc,HEY1,NFKB	Name=137	NA	rs2304169	0.5	0.5	0.482	0.509984	0.3201	0.7312	0.5	0.5159	0.4765	0.34	0.76	0.42	0.5	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.203067	NA	NA	NA	NA	NA	0.42	NA	5.6799
1084	19	15793235	15793235	T	C	exonic	CYP4F12	NA	nonsynonymous SNV	CYP4F12:NM_023944:exon6:c.T562C:p.C188R	exonic	ENSG00000186204	NA	nonsynonymous SNV	ENSG00000186204:ENST00000324632:exon5:c.T562C:p.C188R,ENSG00000186204:ENST00000550308:exon6:c.T562C:p.C188R	NA	NA	19p13.12	NA	NA	NA	NA	rs2285888	0.57	0.57	0.516	0.620008	0.5288	0.745	0.6599	0.6006	0.5828	0.49	0.7	0.6	0.53	0.5907	0.7	1	T	0.0	B	0.0	B	0.882	N	1.000	P	-1.375	N	-1.18	T	-0.958	T	0.000	T	0.105	-2.379	0.004	0.14	-0.146	0.306	2.592	-2.378912	NA	1	0.53407	0.600545	NA	0.536	NA	5.6797634
1084	2	68388823	68388823	A	G	exonic	PNO1	NA	synonymous SNV	PNO1:NM_020143:exon3:c.A366G:p.K122K	exonic	ENSG00000115946	NA	synonymous SNV	ENSG00000115946:ENST00000263657:exon3:c.A366G:p.K122K	Score=607;Name=lod=389	NA	2p14	NA	NA	NA	NA	rs1137930	0.33	0.33	0.287	0.339856	0.327	0.4881	0.353	0.0809	0.5409	0.34	0.49	0.37	0.09	0.3567	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.199782	NA	NA	0.304419	0.127553	NA	0.225	NA	5.6785476
1084	1	10473196	10473196	C	T	exonic	PGD	NA	synonymous SNV	PGD:NM_002631:exon8:c.C732T:p.D244D	exonic	ENSG00000142657	NA	synonymous SNV	ENSG00000142657:ENST00000483936:exon4:c.C297T:p.D99D,ENSG00000142657:ENST00000541529:exon7:c.C666T:p.D222D,ENSG00000142657:ENST00000270776:exon8:c.C732T:p.D244D,ENSG00000142657:ENST00000538557:exon8:c.C693T:p.D231D	NA	NA	1p36.22	NA	Name=Pol2	NA	NA	rs2229687	0.36	0.36	0.351	0.335064	0.338	0.3403	0.3732	0.3457	0.2853	0.34	0.36	0.4	0.36	0.3227	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.380162	NA	NA	0.327558	0.329778	ID=COSM146395;OCCURENCE=1(stomach)	0.304	NA	5.6784086
1084	16	58750604	58750604	G	A	exonic	GOT2	NA	synonymous SNV	GOT2:NM_002080:exon7:c.C816T:p.C272C	exonic	ENSG00000125166	NA	synonymous SNV	ENSG00000125166:ENST00000434819:exon6:c.C687T:p.C229C,ENSG00000125166:ENST00000245206:exon7:c.C816T:p.C272C	Score=697;Name=lod=906	NA	16q21	Score=798;Name=V$COMP1_01	NA	NA	NA	rs1058192	0.71	0.71	0.684	0.720248	0.67	0.6478	0.7738	0.8896	0.5798	0.64	0.64	0.76	0.88	0.6703	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.107324	NA	NA	0.64814	0.842129	ID=COSM1128916;OCCURENCE=1(prostate)	0.812	NA	5.6782266
1084	10	11505175	11505175	A	G	exonic	USP6NL	NA	synonymous SNV	USP6NL:NM_001080491:exon14:c.T1803C:p.P601P,USP6NL:NM_014688:exon15:c.T1752C:p.P584P	exonic	ENSG00000148429	NA	synonymous SNV	ENSG00000148429:ENST00000277575:exon14:c.T1803C:p.P601P,ENSG00000148429:ENST00000379237:exon15:c.T1752C:p.P584P	NA	NA	10p14	NA	Name=NRSF	NA	NA	rs3740204	0.48	0.48	0.517	0.499401	0.3042	0.7351	0.2997	0.5772	0.4939	0.3	0.74	0.31	0.59	0.3697	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.26331	NA	NA	0.314592	0.514081	NA	0.413	NA	5.6781746
1084	18	25543387	25543387	G	A	exonic	CDH2	NA	synonymous SNV	CDH2:NM_001792:exon15:c.C2448T:p.A816A	exonic	ENSG00000170558	NA	synonymous SNV	ENSG00000170558:ENST00000399380:exon14:c.C2355T:p.A785A,ENSG00000170558:ENST00000269141:exon15:c.C2448T:p.A816A	NA	NA	18q12.1	NA	Name=Rad21	NA	NA	rs1041985	0.34	0.34	0.314	0.327476	0.3419	0.4216	0.464	0.1498	0.3589	0.34	0.4	0.46	0.16	0.3339	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.334117	1.334117	NA	0.312791	0.178166	ID=COSM148413;OCCURENCE=1(stomach)	0.428	NA	5.6780756
1084	12	6965194	6965194	A	G	exonic	USP5	NA	synonymous SNV	USP5:NM_001098536:exon4:c.A318G:p.G106G,USP5:NM_003481:exon4:c.A318G:p.G106G	exonic	ENSG00000111667	NA	synonymous SNV	ENSG00000111667:ENST00000229268:exon4:c.A318G:p.G106G,ENSG00000111667:ENST00000389231:exon4:c.A318G:p.G106G,ENSG00000111667:ENST00000542087:exon4:c.A318G:p.G106G	NA	NA	12p13.31	Score=804;Name=V$ER_Q6	NA	NA	NA	rs2226955	0.5	0.5	0.511	0.503395	0.3181	0.505	0.3847	0.8517	0.3057	0.32	0.47	0.43	0.85	0.3648	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.54174	NA	NA	0.306512	0.748298	NA	0.471	NA	5.6772546
1084	9	15055607	15055607	G	A	intergenic	LOC389705,TTC39B	dist=35885;dist=115235	NA	NA	ncRNA_exonic	ENSG00000234297	NA	NA	NA	Score=420;Name=lod=68	NA	9p22.3	NA	Name=CTCF	NA	NA	rs4445325	0.38	0.38	0.386	0.385583	0.3231	0.2262	0.3977	0.6271	0.2791	0.32	0.22	0.41	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.763789	2.763789	NA	NA	NA	NA	0.464	NA	5.6769
1084	22	22842957	22842957	T	G	exonic	ZNF280B	NA	nonsynonymous SNV	ZNF280B:NM_080764:exon4:c.A767C:p.E256A	exonic	ENSG00000198477	NA	nonsynonymous SNV	ENSG00000198477:ENST00000360412:exon4:c.A767C:p.E256A,ENSG00000198477:ENST00000406426:exon4:c.A767C:p.E256A	NA	NA	22q11.22	NA	NA	NA	NA	rs2236729	0.86	0.86	0.864	0.822484	0.9085	0.7698	0.9006	0.8563	0.6871	0.91	0.78	0.89	0.86	0.851	0.91	0.33	T	0.329	B	0.077	B	.	.	1.000	P	0.29	N	4.07	T	-1.086	T	0.000	T	0.152	-0.953	0.337	2.17	0.302	0.479	3.721	-0.952877	NA	0.61	0.897209	0.853155	NA	0.804	NA	5.6766244
1084	17	43111688	43111688	G	A	exonic	DCAKD	NA	synonymous SNV	DCAKD:NM_001128631:exon3:c.C183T:p.N61N,DCAKD:NM_024819:exon3:c.C183T:p.N61N	exonic	ENSG00000172992	NA	synonymous SNV	ENSG00000172992:ENST00000452796:exon2:c.C183T:p.N61N,ENSG00000172992:ENST00000310604:exon3:c.C183T:p.N61N,ENSG00000172992:ENST00000342350:exon3:c.C183T:p.N61N,ENSG00000172992:ENST00000588499:exon3:c.C183T:p.N61N,ENSG00000172992:ENST00000593094:exon3:c.C183T:p.N61N	Score=445;Name=lod=86	NA	17q21.31	NA	NA	NA	NA	rs9900173	0.27	0.27	0.28	0.255791	0.3499	0.2738	0.2161	0.1634	0.2935	0.35	0.29	0.24	0.15	0.2947	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.242167	1.242167	NA	0.346047	0.19882	NA	0.174	NA	5.6760196
1084	11	77301689	77301689	C	T	intronic	AQP11	NA	NA	NA	intronic	ENSG00000074201,ENSG00000178301	NA	NA	NA	NA	NA	11q14.1	NA	Name=Rad21,CTCF,Pol2	Name=60	NA	rs2276416	0.14	0.14	0.133	0.145367	0.0964	0.1825	0.1902	0.1354	0.1391	0.09	0.2	0.16	0.15	0.1352	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.432487	1.432487	NA	0.092498	0.132955	ID=COSN164005;OCCURENCE=1(NS)	0.174	NA	5.675902
1084	2	231338211	231338211	T	G	intronic	SP100	NA	NA	NA	intronic	ENSG00000067066	NA	NA	NA	NA	NA	2q37.1	NA	Name=PU.1,Pol2-4H8	Name=28	NA	rs1678169	0.18	0.18	0.172	0.181909	0.3241	0.0675	0.1729	0.0696	0.3119	0.31	0.06	0.19	0.1	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.212936	NA	NA	NA	NA	NA	0.138	NA	5.6759
1084	8	128098561	128098561	T	A	intergenic	PCAT1,POU5F1B	dist=65302;dist=329296	NA	NA	ncRNA_exonic	ENSG00000224722	NA	NA	NA	Score=500;Name=lod=144	NA	8q24.21	NA	NA	Name=6	NA	rs56311652	0.18	0.18	0.153	0.130591	0.3241	0.0526	0.1916	0.0325	0.1012	0.34	0.07	0.21	0.04	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.720034	2.720034	NA	NA	NA	NA	0.29	NA	5.6759
1085	10	5495218	5495218	T	C	exonic	NET1	NA	synonymous SNV	NET1:NM_005863:exon5:c.T438C:p.Y146Y,NET1:NM_001047160:exon7:c.T600C:p.Y200Y	exonic	ENSG00000173848	NA	synonymous SNV	ENSG00000173848:ENST00000380359:exon5:c.T438C:p.Y146Y,ENSG00000173848:ENST00000355029:exon7:c.T600C:p.Y200Y,ENSG00000173848:ENST00000542715:exon7:c.T57C:p.Y19Y	Score=646;Name=lod=565	NA	10p15.1	Score=944;Name=V$TCF11_01	NA	Name=3	NA	rs4567355	0.99	0.99	0.983	0.976637	0.999	1	0.9986	0.913	1	1	1	1	0.94	0.9929	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.824327	NA	NA	0.999767	0.918293	NA	0.978	NA	5.6749996
1085	3	186435370	186435370	G	A	exonic	KNG1	NA	synonymous SNV	KNG1:NM_000893:exon1:c.G39A:p.L13L,KNG1:NM_001102416:exon1:c.G39A:p.L13L,KNG1:NM_001166451:exon1:c.G39A:p.L13L	exonic	ENSG00000113889	NA	synonymous SNV	ENSG00000113889:ENST00000265023:exon1:c.G39A:p.L13L,ENSG00000113889:ENST00000287611:exon1:c.G39A:p.L13L,ENSG00000113889:ENST00000447445:exon1:c.G39A:p.L13L	Score=369;Name=lod=42	NA	3q27.3	NA	NA	NA	NA	rs1050274	0.35	0.35	0.363	0.389976	0.3241	0.3393	0.3098	0.4728	0.455	0.33	0.3	0.33	0.46	0.3478	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.247043	1.247043	NA	0.320349	0.464594	ID=COSM1178489,COSM1178490;OCCURENCE=1(prostate)	0.341	NA	5.6744176
1085	9	133553993	133553993	C	T	exonic	PRDM12	NA	synonymous SNV	PRDM12:NM_021619:exon4:c.C648T:p.P216P	exonic	ENSG00000130711	NA	synonymous SNV	ENSG00000130711:ENST00000253008:exon4:c.C648T:p.P216P	NA	NA	9q34.12	Score=914;Name=V$E47_02	NA	NA	NA	rs7021384	0.38	0.38	0.384	0.377995	0.3211	0.4722	0.451	0.3336	0.3476	0.32	0.47	0.41	0.36	0.3546	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.05226	NA	NA	0.317791	0.349977	NA	0.377	NA	5.6731756
1085	17	25409812	25409812	G	A	intergenic	NONE,MIR4522	dist=NONE;dist=211124	NA	NA	ncRNA_exonic	ENSG00000265646	NA	NA	NA	Score=808;Name=lod=2553	NA	17q11.1	NA	Name=TAF1,ZBTB33,Pol2(b)	NA	NA	rs2061899	0.44	0.44	0.448	0.470248	0.328	0.506	0.451	0.6369	0.3681	0.31	0.49	0.41	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.21682	NA	NA	NA	NA	NA	0.449	NA	5.672
1085	17	25410315	25410315	A	G	intergenic	NONE,MIR4522	dist=NONE;dist=210621	NA	NA	ncRNA_exonic	ENSG00000265646	NA	NA	NA	Score=808;Name=lod=2553	NA	17q11.1	NA	Name=Pol2-4H8,HEY1,TAF1	NA	NA	rs12449779	0.44	0.44	0.401	0.46905	0.328	0.506	0.451	0.6369	0.362	0.31	0.49	0.41	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.605027	NA	NA	NA	NA	NA	0.442	NA	5.672
1085	17	25410639	25410639	T	C	intergenic	NONE,MIR4522	dist=NONE;dist=210297	NA	NA	ncRNA_exonic	ENSG00000265646	NA	NA	NA	Score=808;Name=lod=2553	NA	17q11.1	NA	Name=ZBTB33,ETS1,BCLAF1_(M33-P5B11),NF-YB,Sin3Ak-20,Pol2-4H8,Egr-1,HEY1,BCL3,GATA2_(CG2-96)	NA	NA	rs11652017	0.44	0.44	0.42	0.470248	0.328	0.506	0.451	0.6369	0.3681	0.31	0.49	0.41	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.395019	NA	NA	NA	NA	NA	0.449	NA	5.672
1085	17	25410734	25410734	A	G	intergenic	NONE,MIR4522	dist=NONE;dist=210202	NA	NA	ncRNA_exonic	ENSG00000265646	NA	NA	NA	Score=808;Name=lod=2553	NA	17q11.1	NA	Name=GATA2_(CG2-96),Sin3Ak-20,NF-YB,ZBTB33	NA	NA	rs11650889	0.44	0.44	0.416	0.470647	0.328	0.506	0.451	0.6384	0.3681	0.31	0.49	0.41	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.324752	NA	NA	NA	NA	NA	0.449	NA	5.672
1085	19	21751988	21751988	C	T	intergenic	ZNF429,ZNF100	dist=30909;dist=154855	NA	NA	ncRNA_exonic	ENSG00000268081	NA	NA	NA	NA	NA	19p12	NA	Name=NF-YB,Pol2	Name=98	NA	rs4809135	NA	NA	0.234	0.31889	0.328	0.3929	0.3905	0.2292	0.3037	NA	NA	NA	NA	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.953035	NA	NA	NA	NA	NA	0.246	NA	5.672
1085	10	99155984	99155984	G	A	exonic	RRP12	NA	synonymous SNV	RRP12:NM_001145114:exon3:c.C444T:p.F148F,RRP12:NM_015179:exon3:c.C444T:p.F148F	exonic	ENSG00000052749	NA	synonymous SNV	ENSG00000052749:ENST00000315563:exon3:c.C444T:p.F148F,ENSG00000052749:ENST00000370992:exon3:c.C444T:p.F148F,ENSG00000052749:ENST00000414986:exon3:c.C444T:p.F148F	Score=459;Name=lod=98	NA	10q24.1	NA	NA	NA	NA	rs3814553	0.37	0.37	0.38	0.404153	0.337	0.3125	0.3429	0.5507	0.4131	0.33	0.28	0.33	0.58	0.3393	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.150151	NA	NA	0.318837	0.493418	NA	0.304	NA	5.6715296
1085	17	48267585	48267585	A	C	intronic	COL1A1	NA	NA	NA	intronic	ENSG00000108821	NA	NA	NA	NA	NA	17q21.33	Score=921;Name=V$PAX4_03	NA	Name=29	NA	rs2075558	0.44	0.44	0.387	0.432308	0.329	0.7847	0.4798	0.1989	0.4571	0.34	0.76	0.43	0.23	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.240781	NA	NA	NA	NA	NA	0.406	NA	5.671
1085	3	46480801	46480801	A	G	exonic	LTF	NA	synonymous SNV	LTF:NM_001199149:exon15:c.T1762C:p.L588L,LTF:NM_002343:exon15:c.T1894C:p.L632L	exonic	ENSG00000012223	NA	synonymous SNV	ENSG00000012223:ENST00000231751:exon15:c.T1894C:p.L632L,ENSG00000012223:ENST00000417439:exon15:c.T1888C:p.L630L,ENSG00000012223:ENST00000426532:exon15:c.T1762C:p.L588L,ENSG00000012223:ENST00000443496:exon18:c.T1855C:p.L619L	Score=251;Name=lod=14	NA	3p21.31	NA	NA	NA	NA	rs9110	0.48	0.48	0.491	0.522564	0.3131	0.6349	0.3991	0.6452	0.544	0.33	0.64	0.35	0.63	0.3998	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.299062	NA	NA	0.282791	0.578529	NA	0.449	NA	5.6709756
1085	11	840319	840319	C	T	UTR3	POLR2L	NM_021128:c.*53G>A	NA	NA	UTR3	ENSG00000177700	ENST00000534030:c.*53G>A,ENST00000322028:c.*53G>A	NA	NA	NA	NA	11p15.5	NA	Name=GR,Pol2	Name=39	NA	rs3059	0.71	0.71	0.678	0.640974	0.663	0.8552	0.7925	0.5272	0.4438	0.67	0.89	0.78	0.52	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.71805	NA	NA	NA	NA	NA	0.594	NA	5.6703334
1085	5	142586694	142586694	A	G	intronic	ARHGAP26	NA	NA	NA	intronic	ENSG00000145819	NA	NA	NA	Score=284;Name=lod=19	NA	5q31.3	NA	Name=Pol2-4H8,YY1_(C-20)	NA	NA	rs2074636	0.35	0.35	0.313	0.370607	0.33	0.4792	0.366	0.1899	0.5481	0.34	0.49	0.38	0.21	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.699441	1.699441	NA	NA	NA	ID=COSN167579;OCCURENCE=1(large_intestine)	0.304	NA	5.67
1085	14	107183416	107183416	G	A	intergenic	LINC00221,NONE	dist=231887;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000254056	NA	NA	NA	Score=439;Name=lod=81	NA	14q32.33	NA	Name=Znf143_(16618-1-AP),PU.1,ELF1_(SC-631),CTCF,CTCF_(SC-5916),USF-1	NA	NA	rs3213595	0.49	0.49	0.444	0.535942	0.33	0.4286	0.3833	0.77	0.6503	0.37	0.43	0.45	0.8	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.184849	NA	NA	NA	NA	NA	0.536	NA	5.67
1085	22	22868776	22868776	G	A	exonic	ZNF280A	NA	synonymous SNV	ZNF280A:NM_080740:exon2:c.C1179T:p.P393P	exonic	ENSG00000169548	NA	synonymous SNV	ENSG00000169548:ENST00000302097:exon2:c.C1179T:p.P393P	Score=512;Name=lod=161	NA	22q11.22	NA	Name=CTCF	NA	NA	rs362173	0.52	0.52	0.444	0.47504	0.7068	0.4137	0.7334	0.2405	0.4335	0.69	0.42	0.69	0.24	0.6102	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.906215	NA	NA	0.680242	0.307535	ID=COSM1179798;OCCURENCE=1(prostate)	0.413	NA	5.6694246
1085	7	102572433	102572433	A	C	intronic	FBXL13,LRRC17	NA	NA	NA	intronic	ENSG00000128606,ENSG00000161040	NA	NA	NA	Score=289;Name=lod=20	NA	7q22.1	NA	NA	Name=5	NA	rs55781834	0.13	0.13	0.127	0.111222	0.1789	0.0099	0.1412	0.1377	0.089	0.19	0.01	0.17	0.15	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.929971	NA	NA	0.151791	0.135838	NA	0.13	NA	5.669309
1085	22	22868773	22868773	G	A	exonic	ZNF280A	NA	synonymous SNV	ZNF280A:NM_080740:exon2:c.C1182T:p.Y394Y	exonic	ENSG00000169548	NA	synonymous SNV	ENSG00000169548:ENST00000302097:exon2:c.C1182T:p.Y394Y	Score=512;Name=lod=161	NA	22q11.22	NA	Name=CTCF	NA	NA	rs361737	0.51	0.51	0.447	0.47504	0.7068	0.4137	0.7334	0.2405	0.4335	0.68	0.41	0.67	0.23	0.6104	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.066736	NA	NA	0.680549	0.307762	ID=COSM1179797;OCCURENCE=1(prostate)	0.413	NA	5.6689176
1085	1	151752383	151752383	G	A	intronic	TDRKH	NA	NA	NA	intronic	ENSG00000182134	NA	NA	NA	NA	NA	1q21.3	Score=859;Name=V$FREAC2_01	NA	Name=4	NA	rs12754510	0.07	0.07	0.059	0.0704872	0.1252	0.0149	0.0706	0.0756	0.0644	0.13	0.01	0.07	0.05	0.0919	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.041299	3.041299	NA	0.114052	0.077563	NA	0.08	NA	5.668848
1085	1	220154768	220154768	C	T	exonic	EPRS	NA	synonymous SNV	EPRS:NM_004446:exon24:c.G3405A:p.Q1135Q	exonic	ENSG00000136628	NA	synonymous SNV	ENSG00000136628:ENST00000366923:exon24:c.G3405A:p.Q1135Q	Score=616;Name=lod=426	NA	1q41	NA	NA	NA	NA	rs1061160	0.36	0.36	0.369	0.354034	0.3101	0.3423	0.4294	0.3986	0.2975	0.3	0.38	0.41	0.41	0.3461	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.089608	NA	NA	0.341628	0.374262	NA	0.261	NA	5.6688386
1085	18	24442392	24442392	C	A	exonic	AQP4	NA	synonymous SNV	AQP4:NM_004028:exon1:c.G135T:p.P45P,AQP4:NM_001650:exon2:c.G201T:p.P67P	exonic	ENSG00000171885	NA	nonsynonymous SNV	ENSG00000171885:ENST00000383170:exon2:c.G197T:p.R66L	NA	NA	18q11.2	NA	NA	NA	NA	rs35248760	0.08	0.08	0.054	0.0441294	0.1223	0.001	0.1009	0.0068	0.0184	0.14	0.01	0.14	0.03	0.0873	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.257471	1.257471	NA	0.122093	0.02769	NA	0.167	NA	5.668307
1085	7	142498897	142498897	A	G	intergenic	PRSS3P2,EPHB6	dist=16498;dist=53895	NA	NA	exonic	ENSG00000211772	NA	unknown	UNKNOWN	NA	NA	7q34	NA	Name=ZBTB7A_(SC-34508),USF-1,THAP1_(SC-98174),E2F6_(H-50)	Name=7	NA	rs1042959	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4984	0.076	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.953973	NA	NA	NA	NA	NA	0.058	NA	5.6682667
1085	2	74135898	74135898	A	G	exonic	ACTG2	NA	synonymous SNV	ACTG2:NM_001199893:exon3:c.A225G:p.E75E,ACTG2:NM_001615:exon4:c.A354G:p.E118E	exonic	ENSG00000163017	NA	synonymous SNV	ENSG00000163017:ENST00000409731:exon3:c.A225G:p.E75E,ENSG00000163017:ENST00000345517:exon4:c.A354G:p.E118E,ENSG00000163017:ENST00000442912:exon4:c.A354G:p.E118E,ENSG00000163017:ENST00000409624:exon5:c.A354G:p.E118E	Score=594;Name=lod=347	NA	2p13.1	Score=920;Name=V$TCF11_01	NA	NA	NA	rs756128	0.59	0.59	0.535	0.571885	0.6938	0.5258	0.7594	0.3903	0.6063	0.7	0.51	0.72	0.43	0.6403	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.17106	NA	NA	0.664302	0.444848	NA	0.558	NA	5.6682646
1085	10	123848113	123848113	G	A	intronic	TACC2	NA	NA	NA	exonic	ENSG00000138162	NA	synonymous SNV	ENSG00000138162:ENST00000453444:exon4:c.G5580A:p.A1860A,ENSG00000138162:ENST00000515273:exon5:c.G5580A:p.A1860A	Score=340;Name=lod=32	NA	10q26.13	NA	NA	NA	NA	rs72839700	0.07	0.07	0.06	0.0766773	0.0437	0.0536	0.1441	0.0893	0.0695	0.05	0.06	0.09	0.09	0.0835	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.020821	NA	NA	0.037907	0.074444	NA	0.072	NA	5.6682263
1085	4	48088419	48088419	C	T	intronic	TXK	NA	NA	NA	intronic	ENSG00000074966	NA	NA	NA	NA	NA	4p12	NA	Name=p300_(N-15),CEBPB	Name=6	NA	rs6833403	0.46	0.46	0.452	0.460064	0.332	0.7649	0.3818	0.3404	0.4949	0.34	0.74	0.38	0.4	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.184607	NA	NA	NA	NA	NA	0.457	NA	5.668
1085	1	145533175	145533175	T	C	exonic	ITGA10	NA	synonymous SNV	ITGA10:NM_003637:exon11:c.T1270C:p.L424L	exonic	ENSG00000143127	NA	synonymous SNV	ENSG00000143127:ENST00000539363:exon7:c.T841C:p.L281L,ENSG00000143127:ENST00000538811:exon8:c.T877C:p.L293L,ENSG00000143127:ENST00000369304:exon11:c.T1270C:p.L424L	NA	NA	1q21.1	Score=890;Name=V$CEBPA_01	NA	NA	NA	rs11590105	0.22	0.22	0.173	0.19988	0.3559	0.1617	0.3458	0.062	0.1616	0.34	0.12	0.36	0.06	0.2926	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.173514	NA	NA	0.350581	0.113482	NA	0.181	NA	5.6675856
1085	1	145074939	145074939	T	C	intronic	NBPF9,PDE4DIP	NA	NA	NA	UTR3	ENSG00000178104	ENST00000369345:c.*25A>G	NA	NA	NA	NA	1q21.1	NA	Name=USF2,SUZ12	Name=117	NA	rs1663854	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4997	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.815532	NA	NA	NA	NA	NA	0.464	NA	5.6669667
1085	18	55862847	55862847	G	A	UTR5	NEDD4L	NM_001144970:c.-126825G>A	NA	NA	ncRNA_exonic	ENSG00000267743	NA	NA	NA	NA	NA	18q21.31	NA	Name=c-Myc	Name=49	NA	rs1008899	0.29	0.29	0.219	0.270367	0.2505	0.501	0.3357	0.0651	0.2843	0.25	0.49	0.33	0.06	0.3166	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.481345	NA	NA	0.265947	0.098174	NA	0.159	NA	5.666953
1085	7	142498735	142498735	A	C	intergenic	PRSS3P2,EPHB6	dist=16336;dist=54057	NA	NA	exonic	ENSG00000211772	NA	unknown	UNKNOWN	NA	NA	7q34	NA	Name=E2F6_(H-50),USF-1	Name=7	NA	rs377360215	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4998	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.280553	NA	0.35	NA	NA	NA	0.362	NA	5.6668667
1085	7	142498738	142498738	C	G	intergenic	PRSS3P2,EPHB6	dist=16339;dist=54054	NA	NA	exonic	ENSG00000211772	NA	unknown	UNKNOWN	NA	NA	7q34	NA	Name=E2F6_(H-50),USF-1	Name=7	NA	rs370415932	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4998	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.083206	NA	0.81	NA	NA	NA	0.362	NA	5.6668667
1085	1	16972920	16972920	C	T	ncRNA_exonic	MST1P2	NA	NA	NA	ncRNA_exonic	ENSG00000186301	NA	NA	NA	Score=454;Name=lod=93	NA	1p36.13	NA	NA	NA	NA	rs4661882	NA	NA	0.251	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.338912	NA	1	NA	NA	NA	0.051	NA	5.6666666
1085	1	16974869	16974869	G	C	ncRNA_exonic	MST1P2	NA	NA	NA	ncRNA_exonic	ENSG00000186301	NA	NA	NA	Score=651;Name=lod=592	NA	1p36.13	NA	NA	NA	NA	rs4570422	NA	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.374708	NA	NA	NA	NA	NA	NA	NA	5.6666666
1085	1	149648547	149648547	C	T	ncRNA_intronic	LINC00869	NA	NA	NA	ncRNA_exonic	ENSG00000239903	NA	NA	NA	Score=825;Name=lod=3016	NA	1q21.2	NA	NA	NA	NA	rs482887	NA	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.246879	NA	NA	NA	NA	NA	NA	NA	5.6666666
1085	1	149648696	149648696	G	A	ncRNA_intronic	LINC00869	NA	NA	NA	ncRNA_exonic	ENSG00000239903	NA	NA	NA	Score=825;Name=lod=3016	NA	1q21.2	NA	NA	NA	NA	rs654715	NA	NA	0.405	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.172558	NA	NA	NA	NA	NA	0.399	NA	5.6666666
1085	2	132292791	132292791	T	C	ncRNA_intronic	RNU6-81P	NA	NA	NA	ncRNA_exonic	ENSG00000224679	NA	NA	NA	Score=575;Name=lod=289	NA	2q21.1	NA	NA	NA	NA	rs3101988	0.41	0.41	0.348	NA	NA	NA	NA	NA	NA	0.28	0.66	0.46	0.3	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.4131	NA	NA	NA	NA	NA	0.246	NA	5.6666666
1085	3	75478181	75478181	C	A	ncRNA_intronic	FAM86DP	NA	NA	NA	ncRNA_intronic	ENSG00000244026	NA	NA	NA	NA	NA	3p12.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.093914	NA	NA	NA	NA	NA	NA	NA	5.6666666
1085	6	32522691	32522691	G	A	ncRNA_exonic	HLA-DRB6	NA	NA	NA	ncRNA_exonic	ENSG00000229391	NA	NA	NA	Score=455;Name=lod=94	NA	6p21.32	NA	NA	NA	NA	rs111879084	NA	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.043507	NA	NA	NA	NA	NA	0.007	NA	5.6666666
1085	6	32522698	32522698	G	T	ncRNA_exonic	HLA-DRB6	NA	NA	NA	ncRNA_exonic	ENSG00000229391	NA	NA	NA	Score=455;Name=lod=94	NA	6p21.32	NA	NA	NA	NA	rs112519097	NA	NA	0.136	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.468861	NA	NA	NA	NA	NA	NA	NA	5.6666666
1085	6	32522703	32522703	T	G	ncRNA_exonic	HLA-DRB6	NA	NA	NA	ncRNA_exonic	ENSG00000229391	NA	NA	NA	Score=455;Name=lod=94	NA	6p21.32	NA	NA	NA	NA	rs112117115	NA	NA	0.157	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.376312	NA	NA	NA	NA	NA	NA	NA	5.6666666
1085	7	6777275	6777275	C	T	ncRNA_exonic	PMS2CL	NA	NA	NA	ncRNA_exonic	ENSG00000187953	NA	NA	NA	NA	NA	7p22.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.250093	NA	NA	NA	NA	NA	NA	NA	5.6666666
1085	7	65228128	65228128	C	T	ncRNA_intronic	CCT6P1,LOC441242	NA	NA	NA	ncRNA_intronic	ENSG00000228409	NA	NA	NA	NA	NA	7q11.21	NA	NA	Name=46	NA	rs2900854	NA	NA	0.319	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.524577	NA	NA	NA	NA	NA	0.123	NA	5.6666666
1085	7	76631462	76631462	A	G	ncRNA_intronic	DTX2P1-UPK3BP1-PMS2P11	NA	NA	NA	ncRNA_intronic	ENSG00000186704,ENSG00000265479	NA	NA	NA	NA	NA	7q11.23	NA	Name=c-Myc	NA	NA	rs7802941	NA	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.14416	NA	NA	NA	NA	NA	0.022	NA	5.6666666
1085	8	12232344	12232344	C	A	ncRNA_intronic	FAM66A	NA	NA	NA	ncRNA_exonic	ENSG00000254423	NA	NA	NA	Score=658;Name=lod=629	NA	8p23.1	NA	NA	NA	NA	rs2684053	0.22	0.22	0.195	NA	NA	NA	NA	NA	NA	0.25	0.27	0.19	0.15	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.494114	NA	NA	NA	NA	NA	0.007	NA	5.6666666
1085	8	12232423	12232423	A	G	ncRNA_intronic	FAM66A	NA	NA	NA	ncRNA_exonic	ENSG00000254423	NA	NA	NA	Score=658;Name=lod=629	NA	8p23.1	NA	NA	NA	NA	rs2739957	0.43	0.43	0.464	NA	NA	NA	NA	NA	NA	0.44	0.33	0.39	0.59	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.410959	NA	NA	NA	NA	NA	0.261	NA	5.6666666
1085	8	12232534	12232534	T	C	ncRNA_intronic	FAM66A	NA	NA	NA	ncRNA_exonic	ENSG00000254423	NA	NA	NA	Score=658;Name=lod=629	NA	8p23.1	NA	NA	NA	NA	rs2739958	0.41	0.41	0.41	NA	NA	NA	NA	NA	NA	0.4	0.32	0.37	0.55	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.298272	NA	NA	NA	NA	NA	0.152	NA	5.6666666
1085	8	12237153	12237153	T	A	ncRNA_exonic	LOC649352	NA	NA	NA	ncRNA_exonic	ENSG00000255556	NA	NA	NA	Score=426;Name=lod=72	NA	8p23.1	NA	NA	NA	NA	rs2739963	0.48	0.48	0.421	NA	NA	NA	NA	NA	NA	0.48	0.36	0.43	0.67	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.668762	NA	NA	NA	NA	NA	NA	NA	5.6666666
1085	8	12237472	12237472	A	G	ncRNA_intronic	FAM66A	NA	NA	NA	ncRNA_exonic	ENSG00000255556	NA	NA	NA	Score=534;Name=lod=198	NA	8p23.1	NA	NA	NA	NA	rs2739964	0.46	0.46	0.48	NA	NA	NA	NA	NA	NA	0.45	0.34	0.41	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.257676	NA	NA	NA	NA	NA	0.08	NA	5.6666666
1085	9	66500794	66500794	T	C	ncRNA_exonic	PTGER4P2-CDK2AP2P2	NA	NA	NA	ncRNA_exonic	ENSG00000237451	NA	NA	NA	Score=391;Name=lod=52	NA	9q13	NA	NA	NA	NA	rs7866420	NA	NA	0.391	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.065485	NA	NA	NA	NA	NA	0.007	NA	5.6666666
1085	9	68429060	68429060	A	C	ncRNA_intronic	LOC642236	NA	NA	NA	ncRNA_intronic	ENSG00000215548	NA	NA	NA	NA	NA	9q13	Score=855;Name=V$FREAC3_01	NA	NA	NA	rs62543296	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.427968	NA	NA	NA	NA	NA	NA	NA	5.6666666
1085	9	68429112	68429112	A	G	ncRNA_exonic	LOC642236	NA	NA	NA	ncRNA_exonic	ENSG00000215548	NA	NA	NA	Score=594;Name=lod=345	NA	9q13	NA	NA	NA	NA	rs62543297	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.915666	NA	NA	NA	NA	NA	0.007	NA	5.6666666
1085	9	68429139	68429139	T	G	ncRNA_exonic	LOC642236	NA	NA	NA	ncRNA_exonic	ENSG00000215548	NA	NA	NA	Score=594;Name=lod=345	NA	9q13	NA	NA	NA	NA	rs62543298	NA	NA	0.621	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.166765	NA	NA	NA	NA	NA	0.007	NA	5.6666666
1085	9	68429175	68429175	A	C	ncRNA_exonic	LOC642236	NA	NA	NA	ncRNA_exonic	ENSG00000215548	NA	NA	NA	Score=594;Name=lod=345	NA	9q13	NA	NA	NA	NA	rs71222000	NA	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.680791	NA	NA	NA	NA	NA	NA	NA	5.6666666
1085	9	68433462	68433462	T	C	ncRNA_intronic	LOC642236	NA	NA	NA	ncRNA_intronic	ENSG00000215548	NA	NA	NA	Score=603;Name=lod=375	NA	9q13	NA	NA	NA	NA	rs111392331	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.252865	NA	NA	NA	NA	NA	NA	NA	5.6666666
1085	9	88437773	88437773	C	G	ncRNA_intronic	LOC389765	NA	NA	NA	ncRNA_intronic	ENSG00000165121	NA	NA	NA	NA	NA	9q21.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.188512	NA	NA	NA	NA	NA	NA	NA	5.6666666
1085	10	47133833	47133833	A	G	ncRNA_exonic	HNRNPA1P33	NA	NA	NA	ncRNA_exonic	ENSG00000213412	NA	NA	NA	Score=520;Name=lod=173	NA	10q11.22	NA	NA	NA	NA	rs4568947	NA	NA	0.427	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.750514	NA	NA	NA	NA	NA	0.457	NA	5.6666666
1085	12	9392975	9392975	C	G	ncRNA_exonic	LOC100499405	NA	NA	NA	ncRNA_exonic	ENSG00000237248	NA	NA	NA	NA	NA	12p13.31	NA	NA	Name=6	NA	rs34368	NA	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.616919	1.616919	NA	NA	NA	NA	0.594	NA	5.6666666
1085	12	9583324	9583324	G	A	ncRNA_exonic	DDX12P	NA	NA	NA	ncRNA_exonic	ENSG00000214826	NA	NA	NA	Score=539;Name=lod=206	NA	12p13.31	NA	NA	NA	NA	rs4012577	0.44	0.44	0.42	NA	NA	NA	NA	NA	NA	0.44	0.52	0.47	0.31	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.047659	2.047659	0.01	NA	NA	ID=COSM432017;OCCURENCE=2(breast)	NA	NA	5.6666666
1085	15	20496657	20496657	C	T	ncRNA_exonic	CHEK2P2	NA	NA	NA	ncRNA_exonic	ENSG00000259156	NA	NA	NA	Score=251;Name=lod=14	NA	15q11.1	NA	NA	NA	NA	rs7180374	NA	NA	0.105	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.315532	NA	NA	NA	NA	NA	0.007	NA	5.6666666
1085	15	21936925	21936925	C	T	ncRNA_exonic	LOC646214	NA	NA	NA	ncRNA_exonic	ENSG00000237161	NA	NA	NA	Score=722;Name=lod=1143	NA	15q11.2	NA	NA	NA	NA	rs28423023	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.954848	NA	NA	NA	NA	NA	0.232	NA	5.6666666
1085	15	21936992	21936992	C	T	ncRNA_exonic	LOC646214	NA	NA	NA	ncRNA_exonic	ENSG00000237161	NA	NA	NA	Score=722;Name=lod=1143	NA	15q11.2	NA	NA	NA	NA	rs4984136	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.918756	NA	NA	NA	NA	NA	0.565	NA	5.6666666
1085	15	21937168	21937168	C	T	ncRNA_exonic	LOC646214	NA	NA	NA	ncRNA_exonic	ENSG00000237161	NA	NA	NA	Score=722;Name=lod=1143	NA	15q11.2	NA	NA	NA	NA	rs12185110	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.025764	NA	NA	NA	NA	NA	0.232	NA	5.6666666
1085	15	21937553	21937553	T	C	ncRNA_exonic	LOC646214	NA	NA	NA	ncRNA_exonic	ENSG00000237161	NA	NA	NA	Score=468;Name=lod=106	NA	15q11.2	NA	NA	NA	NA	rs28626937	NA	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.813991	NA	NA	NA	NA	NA	0.239	NA	5.6666666
1085	15	21937964	21937964	A	G	ncRNA_exonic	LOC646214	NA	NA	NA	ncRNA_exonic	ENSG00000237161	NA	NA	NA	Score=313;Name=lod=25	NA	15q11.2	NA	NA	NA	NA	rs28428761	NA	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.779688	NA	NA	NA	NA	NA	0.232	NA	5.6666666
1085	15	22333187	22333187	T	C	ncRNA_intronic	LOC727924	NA	NA	NA	ncRNA_exonic	ENSG00000258652	NA	NA	NA	Score=358;Name=lod=38	NA	15q11.2	NA	NA	NA	NA	rs1864288	NA	NA	0.366	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.670264	NA	NA	NA	NA	NA	0.29	NA	5.6666666
1085	16	22441095	22441095	A	G	ncRNA_intronic	RRN3P3	NA	NA	NA	ncRNA_intronic	ENSG00000257122	NA	NA	NA	Score=591;Name=lod=335	NA	16p12.2	NA	NA	NA	NA	rs78137544	NA	NA	0.268	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.194634	NA	NA	NA	NA	NA	NA	NA	5.6666666
1085	16	33489895	33489895	A	G	ncRNA_intronic	RNU6-76P	NA	NA	NA	ncRNA_exonic	ENSG00000260518	NA	NA	NA	Score=560;Name=lod=251	NA	16p11.2	NA	NA	NA	NA	rs4887662	NA	NA	0.353	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.957242	NA	NA	NA	NA	NA	0.406	NA	5.6666666
1085	16	33490018	33490018	T	C	ncRNA_intronic	RNU6-76P	NA	NA	NA	ncRNA_exonic	ENSG00000260518	NA	NA	NA	Score=519;Name=lod=171	NA	16p11.2	NA	NA	NA	NA	rs28645082	NA	NA	0.373	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.738729	NA	NA	NA	NA	NA	0.42	NA	5.6666666
1085	16	33500509	33500509	C	T	ncRNA_intronic	RNU6-76P	NA	NA	NA	ncRNA_exonic	ENSG00000260518	NA	NA	NA	Score=671;Name=lod=712	NA	16p11.2	NA	NA	NA	NA	rs28500776	NA	NA	0.318	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.440101	1.440101	0	NA	NA	NA	NA	NA	5.6666666
1085	16	33500537	33500537	C	T	ncRNA_intronic	RNU6-76P	NA	NA	NA	ncRNA_exonic	ENSG00000260518	NA	NA	NA	Score=671;Name=lod=712	NA	16p11.2	NA	NA	NA	NA	rs12923870	NA	NA	0.321	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.26992	1.26992	NA	NA	NA	NA	NA	NA	5.6666666
1085	17	66126338	66126338	G	T	ncRNA_exonic	LINC00674	NA	NA	NA	ncRNA_exonic	ENSG00000267023	NA	NA	NA	NA	NA	17q24.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.361477	1.361477	NA	NA	NA	NA	NA	NA	5.6666666
1085	19	21565942	21565942	T	C	ncRNA_exonic	ZNF738	NA	NA	NA	ncRNA_exonic	ENSG00000213976	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.180691	2.180691	NA	NA	NA	NA	NA	NA	5.6666666
1085	22	22661318	22661318	T	C	ncRNA_intronic	LOC96610	NA	NA	NA	ncRNA_exonic	ENSG00000236850	NA	NA	NA	Score=707;Name=lod=995	NA	22q11.22	NA	NA	NA	NA	rs1044437	0.36	0.36	0.358	NA	NA	NA	NA	NA	NA	0.4	0.15	0.38	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.994634	2.994634	NA	NA	NA	NA	0.355	NA	5.6666666
1085	X	1531520	1531520	C	G	ncRNA_intronic	ASMTL-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000236017	NA	NA	NA	Score=304;Name=lod=23	NA	Xp22.33	NA	NA	NA	NA	rs5949003	0.4	0.4	0.41335	NA	NA	NA	NA	NA	NA	0.44	0.37	0.41	0.38	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.577424	NA	NA	NA	NA	NA	0.413	NA	5.6666666
1085	17	76487668	76487668	G	A	ncRNA_intronic	LOC100996295	NA	NA	NA	ncRNA_intronic	ENSG00000267432	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00003748	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.493752	NA	NA	NA	NA	NA	NA	NA	5.6666291
1085	2	103300756	103300756	G	A	exonic	SLC9A2	NA	synonymous SNV	SLC9A2:NM_003048:exon5:c.G1386A:p.T462T	exonic	ENSG00000115616	NA	synonymous SNV	ENSG00000115616:ENST00000233969:exon5:c.G1386A:p.T462T	NA	NA	2q12.1	NA	NA	NA	NA	rs201428753	0.0005	0.0005	NA	0.000199681	NA	NA	NA	0.0008	NA	NA	NA	NA	0.002	0.00004119	0.002	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.287988	NA	NA	NA	NA	NA	NA	NA	5.6666254
1085	20	23669406	23669406	C	T	exonic	CST4	NA	synonymous SNV	CST4:NM_001899:exon1:c.G201A:p.P67P	exonic	ENSG00000101441	NA	synonymous SNV	ENSG00000101441:ENST00000217423:exon1:c.G201A:p.P67P	NA	NA	20p11.21	NA	NA	NA	NA	rs191660510	0.0005	0.0005	NA	0.000599042	NA	NA	0.0014	0.0015	NA	NA	NA	0.0028	NA	0.0001	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.273506	NA	NA	0	0.000227	NA	0.007	NA	5.6665666
1085	16	3487470	3487470	A	G	exonic	ZNF597	NA	synonymous SNV	ZNF597:NM_152457:exon4:c.T229C:p.L77L	exonic	ENSG00000167981	NA	synonymous SNV	ENSG00000167981:ENST00000301744:exon4:c.T229C:p.L77L	NA	NA	16p13.3	NA	NA	NA	NA	rs369212733	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00003299	0.0001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.287098	NA	NA	0.000116	0	NA	NA	NA	5.6665176
1085	16	1575309	1575309	C	T	exonic	IFT140	NA	synonymous SNV	IFT140:NM_014714:exon22:c.G2787A:p.T929T	exonic	ENSG00000187535	NA	synonymous SNV	ENSG00000187535:ENST00000361339:exon4:c.G369A:p.T123T,ENSG00000187535:ENST00000426508:exon22:c.G2787A:p.T929T	NA	NA	16p13.3	NA	NA	NA	NA	rs374661866	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0002	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.799387	NA	NA	NA	NA	NA	NA	NA	5.6664666
1085	17	21319008	21319008	G	C	exonic	KCNJ12,KCNJ18	NA	synonymous SNV	KCNJ18:NM_001194958:exon3:c.G354C:p.R118R,KCNJ12:NM_021012:exon3:c.G354C:p.R118R	exonic	ENSG00000184185	NA	synonymous SNV	ENSG00000184185:ENST00000331718:exon3:c.G354C:p.R118R,ENSG00000184185:ENST00000583088:exon3:c.G354C:p.R118R	NA	NA	17p11.2	Score=767;Name=V$MIF1_01	NA	NA	NA	rs1657741	NA	NA	NA	0.498802	0.5	0.5	0.5	0.4962	0.499	NA	NA	NA	NA	0.5002	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.822211	NA	NA	NA	NA	NA	0.007	NA	5.6664666
1085	11	101833008	101833008	A	G	exonic	KIAA1377	NA	synonymous SNV	KIAA1377:NM_020802:exon6:c.A1242G:p.T414T	exonic	ENSG00000110318	NA	synonymous SNV	ENSG00000110318:ENST00000537689:exon3:c.A645G:p.T215T,ENSG00000110318:ENST00000263468:exon6:c.A1242G:p.T414T	NA	NA	11q22.1	NA	NA	NA	NA	rs373938848	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00009149	0.0002	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.290791	NA	NA	0.000116	0.000227	NA	NA	NA	5.6664591
1085	1	229738080	229738080	G	A	exonic	TAF5L	NA	synonymous SNV	TAF5L:NM_001025247:exon4:c.C834T:p.P278P,TAF5L:NM_014409:exon4:c.C834T:p.P278P	exonic	ENSG00000135801	NA	synonymous SNV	ENSG00000135801:ENST00000366676:exon3:c.C834T:p.P278P,ENSG00000135801:ENST00000258281:exon4:c.C834T:p.P278P,ENSG00000135801:ENST00000366675:exon4:c.C834T:p.P278P	NA	NA	1q42.13	NA	NA	NA	NA	rs150230938	0.0018	0.0018	0.01	0.000798722	NA	NA	NA	0.003	NA	0.0013	NA	NA	0.01	0.00009886	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.419641	NA	NA	0.000116	0.000227	NA	0.007	NA	5.6664517
1085	14	51259463	51259463	C	T	exonic	NIN	NA	synonymous SNV	NIN:NM_016350:exon5:c.G402A:p.R134R,NIN:NM_020921:exon5:c.G402A:p.R134R,NIN:NM_182944:exon5:c.G402A:p.R134R,NIN:NM_182946:exon5:c.G402A:p.R134R	exonic	ENSG00000100503	NA	synonymous SNV	ENSG00000100503:ENST00000530997:exon3:c.G402A:p.R134R,ENSG00000100503:ENST00000382043:exon4:c.G402A:p.R134R,ENSG00000100503:ENST00000245441:exon5:c.G402A:p.R134R,ENSG00000100503:ENST00000324330:exon5:c.G402A:p.R134R,ENSG00000100503:ENST00000382041:exon5:c.G402A:p.R134R,ENSG00000100503:ENST00000389868:exon5:c.G402A:p.R134R,ENSG00000100503:ENST00000453196:exon5:c.G402A:p.R134R,ENSG00000100503:ENST00000453401:exon5:c.G288A:p.R96R,ENSG00000100503:ENST00000476352:exon5:c.G402A:p.R134R	NA	NA	14q22.1	NA	NA	NA	NA	rs146441468	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0002	0.0001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.168968	NA	NA	0.000116	0	ID=COSM1370038,COSM1370040,COSM1370039;OCCURENCE=1(large_intestine)	NA	NA	5.6663506
1085	2	160035195	160035195	C	T	exonic	TANC1	NA	synonymous SNV	TANC1:NM_001145909:exon14:c.C2007T:p.N669N,TANC1:NM_033394:exon14:c.C2031T:p.N677N	exonic	ENSG00000115183	NA	synonymous SNV	ENSG00000115183:ENST00000454300:exon12:c.C1713T:p.N571N,ENSG00000115183:ENST00000263635:exon14:c.C2031T:p.N677N	Score=596;Name=lod=352	NA	2q24.2	NA	NA	NA	NA	rs12988603	0.21	0.21	0.195	0.159744	0.3688	0.0635	0.2478	0.0703	0.1022	0.36	0.06	0.28	0.08	0.2707	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.809485	NA	NA	0.361059	0.126439	NA	0.261	NA	5.6661076
1085	3	191087546	191087546	A	G	intronic	CCDC50	NA	NA	NA	intronic	ENSG00000152492	NA	NA	NA	NA	NA	3q28	NA	Name=p300,CEBPB	Name=58	NA	rs4677632	0.3	0.3	0.276	0.286542	0.334	0.25	0.3256	0.3048	0.2229	0.34	0.21	0.34	0.32	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.518964	NA	NA	NA	NA	NA	0.239	NA	5.666
1085	18	34310668	34310668	C	T	exonic	FHOD3	NA	synonymous SNV	FHOD3:NM_025135:exon17:c.C2952T:p.N984N	exonic	ENSG00000134775	NA	synonymous SNV	ENSG00000134775:ENST00000591635:exon9:c.C540T:p.N180N,ENSG00000134775:ENST00000359247:exon16:c.C2901T:p.N967N,ENSG00000134775:ENST00000445677:exon16:c.C2838T:p.N946N,ENSG00000134775:ENST00000257209:exon17:c.C2952T:p.N984N,ENSG00000134775:ENST00000590592:exon20:c.C3477T:p.N1159N	Score=526;Name=lod=183	NA	18q12.2	NA	NA	NA	NA	rs3744903	0.29	0.29	0.267	0.319489	0.3161	0.3194	0.4452	0.1505	0.4622	0.3	0.33	0.41	0.14	0.342	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.69591	NA	NA	0.342674	0.188606	NA	0.319	NA	5.6658926
1085	10	43019172	43019172	A	C	ncRNA_exonic	ZNF37BP	NA	NA	NA	ncRNA_exonic	ENSG00000234420	NA	NA	NA	Score=383;Name=lod=48	NA	10q11.21	NA	NA	NA	NA	rs140805664	0.0009	0.0009	0.002	0.00239617	0.001	NA	0.0014	0.0076	NA	NA	NA	NA	0.0041	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.581468	NA	NA	NA	NA	NA	0.007	NA	5.6656666
1085	11	2167401	2167401	G	A	ncRNA_intronic	IGF2-AS	NA	NA	NA	ncRNA_intronic	ENSG00000099869	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	NA	NA	NA	NA	0.000399361	0.001	NA	0.0014	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.714707	NA	NA	NA	NA	NA	NA	NA	5.6656666
1085	11	102677792	102677792	T	A	ncRNA_intronic	WTAPP1	NA	NA	NA	ncRNA_exonic	ENSG00000256035	NA	NA	NA	Score=732;Name=lod=1261	NA	11q22.2	NA	NA	NA	NA	rs58369813	0.02	0.02	0.022	0.0267572	0.001	NA	0.0086	0.0961	NA	NA	NA	0.01	0.09	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.411992	NA	NA	NA	NA	NA	0.036	NA	5.6656666
1085	19	21564053	21564053	G	A	ncRNA_exonic	ZNF738	NA	NA	NA	ncRNA_exonic	ENSG00000268731	NA	NA	NA	Score=569;Name=lod=273	NA	19p12	NA	NA	NA	NA	rs61753928	0.0037	0.0037	0.005	0.00838658	0.001	NA	0.0014	0.0303	NA	NA	NA	0.0028	0.01	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.738549	NA	NA	NA	NA	NA	0.007	NA	5.6656666
1085	16	601653	601653	C	T	exonic	SOLH	NA	synonymous SNV	SOLH:NM_005632:exon9:c.C2334T:p.G778G	exonic	ENSG00000103326	NA	synonymous SNV	ENSG00000103326:ENST00000219611:exon9:c.C2334T:p.G778G	NA	NA	16p13.3	NA	NA	NA	NA	rs144075530	0.0027	0.0027	0.006	0.00259585	NA	NA	0.0014	0.0091	NA	NA	NA	NA	0.01	0.0009	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.471488	NA	NA	0.000233	0.008864	NA	0.007	NA	5.6655336
1085	19	53432483	53432483	G	A	exonic	ZNF816-ZNF321P	NA	synonymous SNV	ZNF816-ZNF321P:NM_001202473:exon4:c.C375T:p.H125H	exonic	ENSG00000180257,ENSG00000221874	NA	synonymous SNV	ENSG00000180257:ENST00000549216:exon2:c.C168T:p.H56H,ENSG00000221874:ENST00000391777:exon4:c.C375T:p.H125H,ENSG00000180257:ENST00000434371:exon5:c.C375T:p.H125H	NA	NA	19q13.41	NA	NA	NA	NA	rs373329746	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0006	0.0007	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.776614	NA	NA	0.000698	0	NA	NA	NA	5.6653686
1085	6	29976917	29976917	C	T	ncRNA_exonic	HLA-J	NA	NA	NA	ncRNA_exonic	ENSG00000204622,ENSG00000204623	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	NA	NA	NA	NA	0.000199681	0.001	NA	NA	NA	NA	NA	NA	NA	NA	0.0003	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.078687	NA	NA	NA	NA	NA	NA	NA	5.6653666
1085	17	7365991	7365991	G	A	exonic	ZBTB4	NA	synonymous SNV	ZBTB4:NM_001128833:exon4:c.C2310T:p.C770C,ZBTB4:NM_020899:exon4:c.C2310T:p.C770C	exonic	ENSG00000174282	NA	synonymous SNV	ENSG00000174282:ENST00000311403:exon4:c.C2310T:p.C770C,ENSG00000174282:ENST00000380599:exon4:c.C2310T:p.C770C	NA	NA	17p13.1	NA	NA	NA	NA	rs138237886	0.0023	0.0023	NA	0.000199681	0.001	NA	NA	NA	NA	0.0013	NA	NA	0.01	0.0003	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.216933	NA	NA	NA	NA	NA	NA	NA	5.6653666
1085	19	38851210	38851210	C	T	exonic	CATSPERG	NA	synonymous SNV	CATSPERG:NM_021185:exon15:c.C1690T:p.L564L	exonic	ENSG00000099338	NA	synonymous SNV	ENSG00000099338:ENST00000410018:exon14:c.C1570T:p.L524L,ENSG00000099338:ENST00000409235:exon15:c.C1690T:p.L564L,ENSG00000099338:ENST00000409410:exon15:c.C1690T:p.L564L	NA	NA	19q13.2	NA	NA	NA	NA	rs200137453	0.0009	0.0009	NA	0.000599042	0.001	NA	0.0029	NA	NA	0.0013	NA	0.0028	NA	0.0004	0.0028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.092291	NA	NA	NA	NA	NA	NA	NA	5.6652666
1085	9	117063988	117063988	C	T	exonic	COL27A1	NA	synonymous SNV	COL27A1:NM_032888:exon55:c.C4836T:p.P1612P	exonic	ENSG00000196739	NA	synonymous SNV	ENSG00000196739:ENST00000356083:exon55:c.C4836T:p.P1612P	NA	NA	9q32	NA	NA	NA	NA	rs142505089	0.0005	0.0005	0.001	0.000199681	0.001	NA	NA	NA	NA	0.0013	NA	NA	NA	0.0003	0.0013	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.678869	NA	NA	0.000116	0	ID=COSM1166305;OCCURENCE=1(large_intestine)	NA	NA	5.6652506
1085	10	15255283	15255283	G	A	exonic	FAM171A1	NA	synonymous SNV	FAM171A1:NM_001010924:exon8:c.C2304T:p.P768P	exonic	ENSG00000148468	NA	synonymous SNV	ENSG00000148468:ENST00000378116:exon8:c.C2304T:p.P768P	NA	NA	10p13	NA	NA	NA	NA	rs139938475	0.0005	0.0005	NA	0.000199681	0.001	NA	NA	NA	NA	0.0013	NA	NA	NA	0.0002	0.0013	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.670128	NA	NA	0.000233	0	NA	NA	NA	5.6652336
1085	19	16238279	16238279	C	T	exonic	RAB8A	NA	synonymous SNV	RAB8A:NM_005370:exon5:c.C357T:p.L119L	exonic	ENSG00000167461	NA	synonymous SNV	ENSG00000167461:ENST00000300935:exon5:c.C357T:p.L119L,ENSG00000167461:ENST00000586682:exon5:c.C357T:p.L119L	NA	NA	19p13.12	Score=849;Name=V$GATA1_03	NA	NA	NA	rs1043308	0.3	0.3	0.284	0.300519	0.337	0.2976	0.379	0.1831	0.3691	0.35	0.3	0.35	0.18	0.3402	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.284263	1.284263	NA	0.324302	0.218339	NA	0.304	NA	5.6651646
1086	10	5138607	5138607	G	A	exonic	AKR1C3	NA	synonymous SNV	AKR1C3:NM_001253908:exon2:c.G90A:p.P30P,AKR1C3:NM_001253909:exon2:c.G90A:p.P30P,AKR1C3:NM_003739:exon2:c.G90A:p.P30P	exonic	ENSG00000196139	NA	synonymous SNV	ENSG00000196139:ENST00000380554:exon2:c.G90A:p.P30P,ENSG00000196139:ENST00000605149:exon2:c.G21A:p.P7P,ENSG00000196139:ENST00000602997:exon3:c.G21A:p.P7P	NA	NA	10p15.1	NA	Name=Pol2	NA	NA	rs7741	0.24	0.24	0.239	0.216254	0.3648	NA	0.196	0.3381	0.136	0.35	NA	0.23	0.35	0.2838	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.319791	NA	NA	0.353687	0.33704	NA	0.196	NA	5.6643796
1086	21	47961711	47961711	G	A	exonic	DIP2A	NA	synonymous SNV	DIP2A:NM_001146114:exon16:c.G1887A:p.L629L,DIP2A:NM_001146115:exon17:c.G1950A:p.L650L,DIP2A:NM_001146116:exon18:c.G2067A:p.L689L,DIP2A:NM_015151:exon18:c.G2079A:p.L693L,DIP2A:NM_206889:exon18:c.G2079A:p.L693L,DIP2A:NM_206890:exon18:c.G2079A:p.L693L,DIP2A:NM_206891:exon18:c.G2079A:p.L693L	exonic	ENSG00000160305	NA	synonymous SNV	ENSG00000160305:ENST00000427143:exon16:c.G1887A:p.L629L,ENSG00000160305:ENST00000466639:exon17:c.G1950A:p.L650L,ENSG00000160305:ENST00000318711:exon18:c.G2082A:p.L694L,ENSG00000160305:ENST00000400274:exon18:c.G2067A:p.L689L,ENSG00000160305:ENST00000417564:exon18:c.G2079A:p.L693L,ENSG00000160305:ENST00000435722:exon18:c.G2079A:p.L693L,ENSG00000160305:ENST00000457905:exon18:c.G2079A:p.L693L	Score=309;Name=lod=24	NA	21q22.3	NA	NA	NA	NA	rs2070435	0.39	0.39	0.42	0.38738	0.3439	0.4058	0.2147	0.5408	0.3282	0.34	0.44	0.23	0.54	0.34	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.166672	NA	NA	0.318664	0.480463	NA	0.536	NA	5.6641026
1086	9	6253571	6253571	C	T	exonic	IL33	NA	synonymous SNV	IL33:NM_001199641:exon3:c.C111T:p.Y37Y,IL33:NM_001199640:exon5:c.C363T:p.Y121Y,IL33:NM_033439:exon6:c.C489T:p.Y163Y	exonic	ENSG00000137033	NA	synonymous SNV	ENSG00000137033:ENST00000417746:exon3:c.C111T:p.Y37Y,ENSG00000137033:ENST00000381434:exon5:c.C489T:p.Y163Y,ENSG00000137033:ENST00000456383:exon5:c.C363T:p.Y121Y	NA	Name=Endometriosis	9p24.1	NA	NA	NA	NA	rs10975519	0.4	0.4	0.367	0.405152	0.3231	0.4375	0.4524	0.4175	0.4059	0.32	0.46	0.43	0.41	0.377	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.970621	NA	NA	0.302558	0.380844	NA	0.341	NA	5.6640086
1086	10	99159963	99159963	C	G	intronic	RRP12	NA	NA	NA	intronic	ENSG00000052749	NA	NA	NA	NA	NA	10q24.1	NA	Name=FOSL1_(SC-183),Pol2,eGFP-JunD,JunD,FOSL2,Sin3Ak-20,c-Jun	Name=137	NA	rs9888117	0.37	0.37	0.38	0.400759	0.336	0.3125	0.3444	0.5386	0.4121	0.33	0.28	0.33	0.56	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.509002	1.509002	NA	NA	NA	NA	0.304	NA	5.664
1086	22	19197896	19197896	T	C	exonic	CLTCL1	NA	synonymous SNV	CLTCL1:NM_001835:exon20:c.A3189G:p.A1063A,CLTCL1:NM_007098:exon20:c.A3189G:p.A1063A	exonic	ENSG00000070371	NA	synonymous SNV	ENSG00000070371:ENST00000263200:exon20:c.A3189G:p.A1063A,ENSG00000070371:ENST00000353891:exon20:c.A3189G:p.A1063A,ENSG00000070371:ENST00000427926:exon20:c.A3189G:p.A1063A,ENSG00000070371:ENST00000505027:exon20:c.A3189G:p.A1063A	Score=437;Name=lod=80	NA	22q11.21	NA	Name=ZNF263	NA	NA	rs698423	0.8	0.8	0.806	0.848043	0.6272	0.9365	0.7767	0.9652	0.8763	0.64	0.94	0.72	0.96	0.7356	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.507748	NA	NA	0.640459	0.915238	NA	0.812	NA	5.6634076
1086	16	30097630	30097630	C	T	exonic	TBX6	NA	synonymous SNV	TBX6:NM_004608:exon9:c.G1227A:p.P409P	exonic	ENSG00000149922	NA	synonymous SNV	ENSG00000149922:ENST00000279386:exon8:c.G1227A:p.P409P,ENSG00000149922:ENST00000395224:exon9:c.G1227A:p.P409P	NA	NA	16p11.2	Score=845;Name=V$HNF4_01	NA	NA	NA	rs2289292	0.31	0.31	0.281	0.250799	0.339	0.4633	0.3112	0.0219	0.2076	0.36	0.5	0.31	0.03	0.3259	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.428988	NA	NA	0.338413	0.08102	ID=COSM330328;OCCURENCE=2(haematopoietic_and_lymphoid_tissue)	0.239	NA	5.6633536
1086	14	65253668	65253668	G	A	exonic	SPTB	NA	synonymous SNV	SPTB:NM_000347:exon15:c.C3015T:p.A1005A,SPTB:NM_001024858:exon15:c.C3015T:p.A1005A	exonic	ENSG00000070182	NA	synonymous SNV	ENSG00000070182:ENST00000389720:exon15:c.C3015T:p.A1005A,ENSG00000070182:ENST00000389721:exon15:c.C3015T:p.A1005A,ENSG00000070182:ENST00000389722:exon15:c.C3015T:p.A1005A,ENSG00000070182:ENST00000542895:exon16:c.C3015T:p.A1005A,ENSG00000070182:ENST00000556626:exon16:c.C3015T:p.A1005A	NA	NA	14q23.3	NA	NA	NA	NA	rs147235045	0.0009	0.0009	0	0.00139776	0.001	NA	0.0014	NA	0.0051	0.0013	NA	0.0028	NA	0.0012	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.339591	NA	NA	0.001279	0.000227	NA	0.007	NA	5.6631876
1086	1	155403848	155403848	G	A	ncRNA_exonic	POU5F1P4	NA	NA	NA	ncRNA_exonic	ENSG00000237872	NA	NA	NA	Score=723;Name=lod=1159	NA	1q22	NA	NA	NA	NA	rs16865367	0.01	0.01	0.011	0.0117812	NA	NA	NA	0.0446	NA	NA	NA	0.0028	0.03	0.0038	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.242944	NA	NA	NA	NA	NA	0.022	NA	5.6628666
1086	13	37012831	37012831	G	A	exonic	CCNA1	NA	synonymous SNV	CCNA1:NM_001111045:exon5:c.G717A:p.T239T,CCNA1:NM_001111046:exon5:c.G588A:p.T196T,CCNA1:NM_001111047:exon5:c.G588A:p.T196T,CCNA1:NM_003914:exon5:c.G720A:p.T240T	exonic	ENSG00000133101	NA	synonymous SNV	ENSG00000133101:ENST00000255465:exon5:c.G720A:p.T240T,ENSG00000133101:ENST00000418263:exon5:c.G717A:p.T239T,ENSG00000133101:ENST00000440264:exon5:c.G588A:p.T196T,ENSG00000133101:ENST00000449823:exon5:c.G588A:p.T196T	NA	NA	13q13.3	NA	NA	NA	NA	rs61755283	0.0037	0.0037	0.004	0.00359425	0.002	NA	0.0043	0.0098	NA	0.0013	NA	NA	0.01	0.0013	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.450022	NA	NA	0.000698	0.001816	NA	0.007	NA	5.6626686
1086	4	146560429	146560429	T	C	exonic	MMAA	NA	synonymous SNV	MMAA:NM_172250:exon2:c.T138C:p.S46S	exonic	ENSG00000151611	NA	synonymous SNV	ENSG00000151611:ENST00000511969:exon1:c.T138C:p.S46S,ENSG00000151611:ENST00000281317:exon2:c.T138C:p.S46S	NA	NA	4q31.21	NA	NA	NA	NA	rs34702224	0.01	0.01	0.02	0.0135783	NA	NA	0.0043	0.0492	NA	NA	NA	0.01	0.05	0.0037	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.823993	NA	NA	0.000465	0.028597	NA	0.007	NA	5.6625016
1086	12	56748273	56748273	G	A	exonic	STAT2	NA	synonymous SNV	STAT2:NM_005419:exon8:c.C759T:p.H253H,STAT2:NM_198332:exon8:c.C747T:p.H249H	exonic	ENSG00000170581	NA	synonymous SNV	ENSG00000170581:ENST00000314128:exon8:c.C759T:p.H253H,ENSG00000170581:ENST00000418572:exon8:c.C747T:p.H249H,ENSG00000170581:ENST00000557235:exon8:c.C747T:p.H249H	NA	NA	12q13.3	NA	NA	NA	NA	rs147605088	0.0009	0.0009	NA	0.000599042	0.001	NA	0.0029	NA	NA	NA	NA	0.01	NA	0.0018	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.033245	NA	NA	0.001512	0.000454	NA	NA	NA	5.6623546
1086	7	36763688	36763688	C	T	exonic	AOAH	NA	synonymous SNV	AOAH:NM_001177507:exon1:c.G66A:p.S22S,AOAH:NM_001637:exon1:c.G66A:p.S22S	exonic	ENSG00000136250	NA	synonymous SNV	ENSG00000136250:ENST00000258749:exon1:c.G66A:p.S22S,ENSG00000136250:ENST00000414637:exon1:c.G66A:p.S22S,ENSG00000136250:ENST00000431169:exon1:c.G66A:p.S22S,ENSG00000136250:ENST00000435386:exon1:c.G66A:p.S22S,ENSG00000136250:ENST00000535891:exon1:c.G66A:p.S22S	NA	NA	7p14.2	NA	Name=Pol2-4H8,POU2F2,Oct-2	NA	NA	rs2228411	0.4	0.4	0.417	0.378195	0.325	0.4177	0.2867	0.553	0.2209	0.31	0.44	0.34	0.53	0.3245	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.229431	NA	NA	0.354884	0.521788	ID=COSM150268;OCCURENCE=1(breast),1(stomach)	0.551	NA	5.6622826
1086	18	13068921	13068921	C	T	exonic	CEP192	NA	synonymous SNV	CEP192:NM_032142:exon25:c.C4893T:p.P1631P	exonic	ENSG00000101639	NA	synonymous SNV	ENSG00000101639:ENST00000430049:exon15:c.C3468T:p.P1156P,ENSG00000101639:ENST00000510237:exon16:c.C3693T:p.P1231P,ENSG00000101639:ENST00000325971:exon23:c.C3105T:p.P1035P,ENSG00000101639:ENST00000506447:exon25:c.C4893T:p.P1631P	NA	NA	18p11.21	NA	NA	NA	NA	rs143041966	0.0014	0.0014	0.002	0.00119808	0.003	NA	0.0014	NA	0.002	0.0026	NA	0.0028	NA	0.001	0.0028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.068828	NA	NA	0.000581	0	NA	NA	NA	5.6620856
1086	2	98354511	98354511	G	A	exonic	ZAP70	NA	synonymous SNV	ZAP70:NM_207519:exon5:c.G756A:p.E252E,ZAP70:NM_001079:exon13:c.G1677A:p.E559E	exonic	ENSG00000115085	NA	synonymous SNV	ENSG00000115085:ENST00000451498:exon5:c.G756A:p.E252E,ENSG00000115085:ENST00000442208:exon11:c.G1299A:p.E433E,ENSG00000115085:ENST00000264972:exon13:c.G1677A:p.E559E	Score=475;Name=lod=114	NA	2q11.2	NA	NA	NA	NA	rs3192177	0.19	0.19	0.152	0.148363	0.3618	0.0109	0.2075	0.087	0.1115	0.38	0.01	0.22	0.08	0.3012	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.911672	NA	NA	0.341744	0.125965	NA	0.167	NA	5.6619226
1086	3	101431585	101431585	A	C	ncRNA_exonic	PDCL3P4	NA	NA	NA	ncRNA_exonic	ENSG00000244119	NA	NA	NA	Score=741;Name=lod=1363	NA	3q12.3	NA	NA	NA	NA	rs191815147	0.0018	0.0018	NA	0.000998403	0.005	NA	NA	NA	NA	0.01	NA	NA	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.235926	NA	NA	NA	NA	NA	NA	NA	5.6616666
1086	2	110922703	110922703	C	T	exonic	NPHP1	NA	synonymous SNV	NPHP1:NM_001128179:exon5:c.G468A:p.E156E,NPHP1:NM_000272:exon7:c.G654A:p.E218E,NPHP1:NM_001128178:exon7:c.G654A:p.E218E,NPHP1:NM_207181:exon7:c.G654A:p.E218E	exonic	ENSG00000144061	NA	synonymous SNV	ENSG00000144061:ENST00000355301:exon5:c.G468A:p.E156E,ENSG00000144061:ENST00000316534:exon7:c.G654A:p.E218E,ENSG00000144061:ENST00000393272:exon7:c.G654A:p.E218E,ENSG00000144061:ENST00000417665:exon7:c.G654A:p.E218E,ENSG00000144061:ENST00000445609:exon7:c.G654A:p.E218E	NA	NA	2q13	NA	NA	NA	NA	rs11675767	0.45	0.45	0.432	0.474441	0.3032	0.5863	0.4193	0.5106	0.5256	0.29	0.58	0.46	0.54	0.3793	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.440221	NA	NA	0.322558	0.488652	NA	0.406	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000078490.3;CLNDSDB=.;CLNDSDBID=.	5.6616086
1086	5	39074296	39074296	G	C	intronic	RICTOR	NA	NA	NA	intronic	ENSG00000164327	NA	NA	NA	Score=604;Name=lod=380	NA	5p13.1	NA	Name=Pol2-4H8,HA-E2F1,Sin3Ak-20,Ini1,Pol2,TAF1,TBP,CCNT2	Name=25	NA	rs2303808	0.43	0.43	0.389	0.426717	0.4592	0.4702	0.3847	0.3797	0.4417	0.46	0.51	0.4	0.31	0.4444	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.06215	2.06215	NA	0.435187	0.385332	NA	0.007	NA	5.661213
1086	7	26779620	26779620	G	A	intronic	SKAP2	NA	NA	NA	intronic	ENSG00000005020	NA	NA	NA	NA	NA	7p15.2	Score=1000;Name=V$AP2REP_01	NA	Name=2	NA	rs10246483	0.1	0.1	0.12	0.11901	0.1173	0.0248	0.0879	0.2247	0.0971	0.11	0.03	0.08	0.21	0.1115	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.92352	2.92352	NA	0.11	0.216069	NA	0.174	NA	5.6612
1086	2	25469628	25469628	C	T	exonic	DNMT3A	NA	synonymous SNV	DNMT3A:NM_153759:exon6:c.G573A:p.A191A,DNMT3A:NM_022552:exon10:c.G1140A:p.A380A,DNMT3A:NM_175629:exon10:c.G1140A:p.A380A	exonic	ENSG00000119772	NA	synonymous SNV	ENSG00000119772:ENST00000402667:exon5:c.G471A:p.A157A,ENSG00000119772:ENST00000380746:exon6:c.G573A:p.A191A,ENSG00000119772:ENST00000264709:exon10:c.G1140A:p.A380A,ENSG00000119772:ENST00000321117:exon10:c.G1140A:p.A380A,ENSG00000119772:ENST00000380756:exon10:c.G1140A:p.A380A	NA	NA	2p23.3	NA	NA	NA	NA	rs77345627	0.01	0.01	0.011	0.0157748	NA	NA	0.0029	0.0582	NA	NA	NA	0.0028	0.05	0.0052	0.056	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.876718	NA	NA	0.000349	0.056287	NA	0.014	NA	5.6611176
1086	3	184293769	184293769	T	C	exonic	EPHB3	NA	synonymous SNV	EPHB3:NM_004443:exon4:c.T1008C:p.C336C	exonic	ENSG00000182580	NA	synonymous SNV	ENSG00000182580:ENST00000330394:exon4:c.T1008C:p.C336C	Score=503;Name=lod=148	NA	3q27.1	NA	NA	NA	NA	rs7652597	0.33	0.33	0.373	0.336861	0.3608	0.1657	0.2507	0.5598	0.2485	0.34	0.17	0.29	0.54	0.3143	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.317861	1.317861	NA	0.330465	0.533818	NA	0.37	NA	5.6611016
1086	17	1680318	1680318	A	G	intronic	SERPINF1	NA	NA	NA	intronic	ENSG00000132386	NA	NA	NA	NA	NA	17p13.3	NA	Name=HA-E2F1,ERalpha_a	Name=5	NA	rs9889773	0.44	0.44	0.411	0.435503	0.339	0.5347	0.4885	0.3865	0.4611	0.35	0.55	0.42	0.46	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.774848	NA	NA	NA	NA	NA	0.355	NA	5.661
1086	19	22155844	22155844	G	T	exonic	ZNF208	NA	synonymous SNV	ZNF208:NM_007153:exon4:c.C1992A:p.P664P	exonic	ENSG00000160321	NA	synonymous SNV	ENSG00000160321:ENST00000397126:exon4:c.C1992A:p.P664P	NA	NA	19p12	NA	NA	NA	NA	rs146289217	0.01	0.01	0.007	0.0181709	NA	NA	0.0043	0.0658	0.001	NA	NA	0.0028	0.04	0.0058	0.061	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.931797	NA	NA	0.000474	0.060584	NA	NA	NA	5.6603926
1086	22	42463814	42463814	C	T	exonic	NAGA	NA	synonymous SNV	NAGA:NM_000262:exon3:c.G279A:p.P93P	exonic	ENSG00000198951	NA	synonymous SNV	ENSG00000198951:ENST00000396398:exon3:c.G279A:p.P93P,ENSG00000198951:ENST00000402937:exon4:c.G279A:p.P93P,ENSG00000198951:ENST00000403363:exon4:c.G279A:p.P93P	NA	NA	22q13.2	NA	Name=AP-2gamma	Name=2	NA	rs133369	0.7	0.7	0.688	0.676917	0.668	0.8532	0.6772	0.5726	0.6452	0.67	0.84	0.69	0.58	0.6728	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.949576	NA	NA	0.665581	0.597594	NA	0.659	NA	5.6602856
1086	2	160042198	160042198	G	A	intronic	TANC1	NA	NA	NA	intronic	ENSG00000115183	NA	NA	NA	NA	NA	2q24.2	NA	Name=BATF,CTCF,PAX5-C20,GR	Name=106	NA	rs17494014	0.17	0.17	0.156	0.117612	0.34	0.003	0.2248	0.0174	0.0665	0.34	0.0035	0.25	0.03	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.01532	NA	NA	NA	NA	NA	0.181	NA	5.66
1086	19	49703764	49703764	A	G	intronic	TRPM4	NA	NA	NA	intronic	ENSG00000130529	NA	NA	NA	NA	NA	19q13.33	NA	Name=IRF1,YY1	Name=28	NA	rs10403114	0.27	0.27	0.246	0.28774	0.34	0.245	0.2305	0.2436	0.3783	0.32	0.22	0.29	0.23	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.311331	NA	NA	NA	NA	NA	0.268	NA	5.66
1086	19	53959804	53959804	T	C	exonic	ZNF761	NA	synonymous SNV	ZNF761:NM_001008401:exon7:c.T2043C:p.H681H	ncRNA_exonic	ENSG00000160336	NA	NA	NA	Score=393;Name=lod=53	NA	19q13.42	NA	NA	NA	NA	rs4803129	0.17	0.17	0.182	0.145966	0.165	0.1349	0.1066	0.1914	0.1043	0.17	0.15	0.13	0.22	0.1589	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.491021	NA	NA	0.182791	0.155016	ID=COSM148731;OCCURENCE=1(stomach)	0.123	NA	5.6599756
1086	20	36859627	36859627	C	G	exonic	KIAA1755	NA	synonymous SNV	KIAA1755:NM_001029864:exon5:c.G1848C:p.L616L	exonic	ENSG00000149633	NA	synonymous SNV	ENSG00000149633:ENST00000279024:exon5:c.G1848C:p.L616L	NA	NA	20q11.23	NA	NA	NA	NA	rs117470471	0.02	0.02	0.014	0.0141773	0.001	0.0417	0.0014	0.0174	0.0041	NA	0.04	0.0028	0.02	0.0054	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.348217	NA	NA	0.000349	0.016568	NA	NA	NA	5.6599176
1086	7	4089011	4089011	G	A	exonic	SDK1	NA	synonymous SNV	SDK1:NM_152744:exon18:c.G2634A:p.T878T	exonic	ENSG00000146555	NA	synonymous SNV	ENSG00000146555:ENST00000389531:exon18:c.G2634A:p.T878T,ENSG00000146555:ENST00000404826:exon18:c.G2634A:p.T878T	NA	NA	7p22.2	NA	NA	NA	NA	rs139642198	0.0009	0.0009	NA	0.000399361	0.002	NA	NA	NA	NA	0.0026	NA	NA	NA	0.0021	0.0027	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.080055	NA	NA	0.002674	0.000908	NA	NA	NA	5.6598926
1086	7	47917126	47917126	T	C	exonic	PKD1L1	NA	synonymous SNV	PKD1L1:NM_138295:exon22:c.A3624G:p.A1208A	exonic	ENSG00000158683	NA	synonymous SNV	ENSG00000158683:ENST00000289672:exon22:c.A3624G:p.A1208A	NA	NA	7p12.3	NA	NA	NA	NA	rs139854035	0.0027	0.0027	NA	0.00239617	0.005	NA	0.0101	NA	NA	0.0026	NA	0.01	NA	0.0011	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.22408	NA	NA	0.000814	0.000227	NA	NA	NA	5.6597526
1086	15	45695763	45695763	G	C	intronic	SPATA5L1	NA	NA	NA	intronic	ENSG00000171763	NA	NA	NA	NA	NA	15q21.1	NA	Name=BAF155,TAF1,YY1_(C-20),Pol2,Pol2(phosphoS2),HEY1,AP-2gamma,TBP,HA-E2F1,Sin3Ak-20	Name=114	NA	rs117332547	0.06	0.06	0.061	0.0650958	0.1252	NA	0.1614	0.0038	0.0849	0.12	NA	0.13	0.01	0.1086	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.744394	NA	0.19	0.10649	0.019241	NA	0.058	NA	5.65971
1086	20	31812949	31812949	C	T	exonic	BPIFA3	NA	synonymous SNV	BPIFA3:NM_001042439:exon3:c.C324T:p.I108I,BPIFA3:NM_178466:exon4:c.C432T:p.I144I	exonic	ENSG00000131059	NA	synonymous SNV	ENSG00000131059:ENST00000375452:exon3:c.C324T:p.I108I,ENSG00000131059:ENST00000375454:exon4:c.C432T:p.I144I	NA	NA	20q11.21	NA	NA	NA	NA	rs147632261	0.01	0.01	0.008	0.00479233	0.004	NA	0.0029	0.0136	NA	0.01	NA	0.01	0.02	0.0019	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.130387	NA	NA	0.001163	0.012256	NA	0.007	NA	5.6596036
1086	18	19995731	19995731	T	C	exonic	CTAGE1	NA	nonsynonymous SNV	CTAGE1:NM_172241:exon1:c.A2044G:p.I682V	exonic	ENSG00000212710	NA	nonsynonymous SNV	ENSG00000212710:ENST00000391403:exon1:c.A2044G:p.I682V	NA	NA	18q11.2	NA	NA	NA	NA	rs9946136	0.18	0.18	0.165	0.187101	0.2346	0.0387	0.1787	0.2481	0.2147	0.24	0.04	0.2	0.23	0.2062	0.25	.	.	0.0	B	0.001	B	.	.	1.000	P	0.41	N	3.19	T	-0.908	T	0.000	T	0.106	-0.206	3.003	0.614	0.486	0.319	.	-0.205701	NA	NA	0.233053	0.252971	NA	0.13	NA	5.6594804
1086	14	106866654	106866654	T	C	intergenic	LINC00226,LINC00221	dist=121688;dist=71801	NA	NA	exonic	ENSG00000211958	NA	nonsynonymous SNV	ENSG00000211958:ENST00000390618:exon2:c.A100G:p.R34G	Score=452;Name=lod=92	NA	14q32.33	NA	NA	NA	NA	rs111799426	NA	NA	0.111	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.1743	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.464694	NA	1	NA	NA	NA	NA	NA	5.6590334
1086	4	82369160	82369160	C	T	intronic	RASGEF1B	NA	NA	NA	intronic	ENSG00000138670	NA	NA	NA	NA	NA	4q21.21	NA	Name=FOSL1_(SC-183)	Name=7	NA	rs1077802	0.41	0.41	0.43	0.453474	0.341	0.2252	0.2421	0.8654	0.3978	0.35	0.2	0.26	0.87	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.228596	NA	NA	NA	NA	NA	0.471	NA	5.659
1086	4	144833153	144833153	C	G	intergenic	GYPE,GYPB	dist=6437;dist=84104	NA	NA	ncRNA_exonic	ENSG00000249741	NA	NA	NA	Score=690;Name=lod=849	NA	4q31.21	NA	NA	Name=50	NA	rs74590858	0.16	0.16	0.106	0.191893	0.341	0.0417	0.33	0.034	0.3088	0.26	0.04	0.31	0.04	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.816921	NA	NA	NA	NA	NA	NA	NA	5.659
1086	4	144833154	144833154	T	G	intergenic	GYPE,GYPB	dist=6438;dist=84103	NA	NA	ncRNA_exonic	ENSG00000249741	NA	NA	NA	Score=690;Name=lod=849	NA	4q31.21	NA	NA	Name=50	NA	rs78713560	0.16	0.16	0.111	0.191893	0.341	0.0417	0.33	0.034	0.3088	0.26	0.04	0.31	0.04	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.90394	NA	NA	NA	NA	NA	NA	NA	5.659
1086	6	29912410	29912410	G	A	intronic	HLA-A	NA	NA	NA	exonic	ENSG00000206503	NA	synonymous SNV	ENSG00000206503:ENST00000376806:exon5:c.G1029A:p.K343K	NA	NA	6p22.1	NA	Name=Pol2-4H8,Pol2	NA	NA	rs41551619	NA	NA	NA	0.102636	0.0606	0.2629	0.0418	0.0008	0.1616	NA	NA	NA	NA	0.1138	0.054	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.676617	NA	NA	NA	NA	NA	0.094	NA	5.6589333
1086	19	13008607	13008607	G	T	exonic	GCDH	NA	synonymous SNV	GCDH:NM_000159:exon11:c.G1173T:p.G391G,GCDH:NM_013976:exon11:c.G1173T:p.G391G	exonic	ENSG00000105607	NA	synonymous SNV	ENSG00000105607:ENST00000591470:exon10:c.G1173T:p.G391G,ENSG00000105607:ENST00000222214:exon11:c.G1173T:p.G391G,ENSG00000105607:ENST00000422947:exon11:c.G1041T:p.G347G,ENSG00000105607:ENST00000457854:exon11:c.G1173T:p.G391G	NA	NA	19p13.2	NA	NA	NA	NA	rs1060218	0.25	0.25	0.218	0.250399	0.325	0.1438	0.4308	0.171	0.2628	0.31	0.13	0.42	0.16	0.3245	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.018923	NA	NA	0.358256	0.207217	NA	0.246	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000078250.1;CLNDSDB=.;CLNDSDBID=.	5.6589106
1086	17	78599655	78599655	G	T	intronic	RPTOR	NA	NA	NA	intronic	ENSG00000141564	NA	NA	NA	NA	NA	17q25.3	NA	Name=Pbx3	Name=16	NA	rs901065	0.35	0.35	0.332	0.321286	0.3419	0.2669	0.2824	0.4463	0.2147	0.34	0.28	0.3	0.49	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.294294	NA	NA	NA	NA	NA	0.297	NA	5.6581
1086	19	7917919	7917919	C	T	intronic	EVI5L	NA	NA	NA	intronic	ENSG00000142459	NA	NA	NA	NA	NA	19p13.2	NA	Name=CTCFL_(SC-98982),CTCF,CTCF_(C-20)	Name=4	NA	rs12975442	0.37	0.37	0.33	0.429313	0.3429	0.4732	0.4971	0.2156	0.7137	0.35	0.5	0.46	0.18	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.196206	NA	NA	NA	NA	NA	0.348	NA	5.6571
1086	13	25283494	25283494	C	T	intronic	ATP12A	NA	NA	NA	intronic	ENSG00000075673	NA	NA	NA	NA	NA	13q12.12	NA	Name=EBF1_(C-8)	Name=11	NA	rs895423	0.09	0.09	0.071	0.103834	0.1183	0.126	0.0663	0.0424	0.1759	0.12	0.13	0.08	0.03	0.1101	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.308956	NA	NA	0.114535	0.04857	NA	0.167	NA	5.657065
1086	3	195507993	195507993	G	A	exonic	MUC4	NA	synonymous SNV	MUC4:NM_018406:exon2:c.C10458T:p.T3486T	exonic	ENSG00000145113	NA	synonymous SNV	ENSG00000145113:ENST00000462323:exon2:c.C10458T:p.T3486T,ENSG00000145113:ENST00000463781:exon2:c.C10458T:p.T3486T,ENSG00000145113:ENST00000466475:exon2:c.C10458T:p.T3486T,ENSG00000145113:ENST00000470451:exon2:c.C10458T:p.T3486T,ENSG00000145113:ENST00000475231:exon2:c.C10458T:p.T3486T,ENSG00000145113:ENST00000477086:exon2:c.C10458T:p.T3486T,ENSG00000145113:ENST00000477756:exon2:c.C10458T:p.T3486T,ENSG00000145113:ENST00000478156:exon2:c.C10458T:p.T3486T,ENSG00000145113:ENST00000479406:exon2:c.C10458T:p.T3486T,ENSG00000145113:ENST00000480843:exon2:c.C10458T:p.T3486T	NA	NA	3q29	NA	NA	NA	NA	rs201179949	NA	NA	NA	0.00179712	0.006	NA	0.0029	NA	0.001	NA	NA	NA	NA	0.0038	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.60326	NA	NA	NA	NA	NA	NA	NA	5.6568666
1086	12	130898844	130898844	G	A	exonic	RIMBP2	NA	synonymous SNV	RIMBP2:NM_015347:exon14:c.C2478T:p.Y826Y	exonic	ENSG00000060709	NA	synonymous SNV	ENSG00000060709:ENST00000261655:exon14:c.C2478T:p.Y826Y	NA	NA	12q24.33	NA	NA	NA	NA	rs117753238	0.0027	0.0027	0	0.00219649	0.005	NA	0.0043	0.0023	NA	0.01	NA	0.01	NA	0.0025	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.252501	NA	NA	0.002326	0.002043	NA	NA	NA	5.6568406
1086	7	93544357	93544357	G	A	intergenic	GNGT1,GNG11	dist=3872;dist=6659	NA	NA	intergenic	ENSG00000127928,ENSG00000127920	dist=3780;dist=6654	NA	NA	Score=573;Name=lod=283	NA	7q21.3	NA	Name=CEBPB,p300,AP-2gamma,p300_(N-15),JunD,c-Fos	Name=109	NA	rs180259	0.64	0.64	0.642	0.608027	0.6769	0.7401	0.6254	0.4622	0.5859	0.67	0.77	0.64	0.46	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.133354	NA	NA	NA	NA	NA	0.725	NA	5.6564334
1086	17	73269676	73269676	C	T	exonic	SLC25A19	NA	synonymous SNV	SLC25A19:NM_001126122:exon7:c.G819A:p.L273L,SLC25A19:NM_001126121:exon8:c.G819A:p.L273L,SLC25A19:NM_021734:exon8:c.G819A:p.L273L	exonic	ENSG00000125454	NA	synonymous SNV	ENSG00000125454:ENST00000375261:exon5:c.G648A:p.L216L,ENSG00000125454:ENST00000402418:exon6:c.G819A:p.L273L,ENSG00000125454:ENST00000583332:exon6:c.G504A:p.L168L,ENSG00000125454:ENST00000442286:exon7:c.G819A:p.L273L,ENSG00000125454:ENST00000416858:exon8:c.G819A:p.L273L,ENSG00000125454:ENST00000580994:exon8:c.G819A:p.L273L,ENSG00000125454:ENST00000320362:exon9:c.G819A:p.L273L	NA	NA	17q25.1	Score=896;Name=V$E47_02	NA	NA	NA	rs4789164	0.59	0.59	0.534	0.530152	0.6809	0.8264	0.67	0.0454	0.6258	0.7	0.89	0.63	0.05	0.6517	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.288753	NA	NA	0.677791	0.162052	NA	0.543	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118371.2;CLNDSDB=.;CLNDSDBID=.	5.6562756
1086	1	204966170	204966170	T	C	intronic	NFASC	NA	NA	NA	intronic	ENSG00000163531	NA	NA	NA	Score=304;Name=lod=23	NA	1q32.1	NA	NA	Name=4	NA	rs16854920	0.28	0.28	0.26	0.284345	0.3439	0.3105	0.353	0.1286	0.3579	0.35	0.26	0.38	0.13	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.146865	NA	NA	NA	NA	NA	0.319	NA	5.6561
1086	9	136913355	136913355	T	C	exonic	BRD3	NA	synonymous SNV	BRD3:NM_007371:exon6:c.A936G:p.L312L	exonic	ENSG00000169925	NA	synonymous SNV	ENSG00000169925:ENST00000303407:exon6:c.A936G:p.L312L,ENSG00000169925:ENST00000357885:exon6:c.A936G:p.L312L,ENSG00000169925:ENST00000371834:exon6:c.A936G:p.L312L	Score=634;Name=lod=501	NA	9q34.2	Score=896;Name=V$E47_02	NA	NA	NA	rs464826	0.68	0.68	0.715	0.72504	0.6759	0.6845	0.5418	0.8691	0.7526	0.68	0.66	0.55	0.8	0.6835	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.259698	1.259698	NA	0.651395	0.817666	NA	0.681	NA	5.6558716
1086	11	840477	840477	A	G	exonic	POLR2L	NA	synonymous SNV	POLR2L:NM_021128:exon2:c.T99C:p.D33D	exonic	ENSG00000177700	NA	synonymous SNV	ENSG00000177700:ENST00000322028:exon2:c.T99C:p.D33D,ENSG00000177700:ENST00000534030:exon2:c.T99C:p.D33D	NA	NA	11p15.5	NA	Name=Pol2	Name=39	NA	rs4895	0.71	0.71	0.66	0.642173	0.663	0.8552	0.7925	0.5318	0.4438	0.67	0.89	0.78	0.52	0.6703	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.496656	NA	NA	0.677524	0.54857	NA	0.558	NA	5.6558426
1086	9	136337164	136337164	C	G	exonic	SLC2A6	NA	synonymous SNV	SLC2A6:NM_001145099:exon9:c.G1317C:p.G439G,SLC2A6:NM_017585:exon10:c.G1503C:p.G501G	exonic	ENSG00000160326	NA	synonymous SNV	ENSG00000160326:ENST00000371897:exon9:c.G1317C:p.G439G,ENSG00000160326:ENST00000371899:exon10:c.G1503C:p.G501G	NA	NA	9q34.2	NA	NA	NA	NA	rs142001028	NA	NA	NA	0.000798722	0.003	NA	0.0014	NA	NA	NA	NA	NA	NA	0.0025	0.0053	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.425845	NA	NA	0.005349	0.001135	NA	NA	NA	5.6558176
1086	4	143324094	143324094	G	A	exonic	INPP4B	NA	synonymous SNV	INPP4B:NM_001101669:exon7:c.C369T:p.D123D,INPP4B:NM_003866:exon8:c.C369T:p.D123D	exonic	ENSG00000109452	NA	synonymous SNV	ENSG00000109452:ENST00000506297:exon1:c.C69T:p.D23D,ENSG00000109452:ENST00000308502:exon4:c.C369T:p.D123D,ENSG00000109452:ENST00000506217:exon4:c.C369T:p.D123D,ENSG00000109452:ENST00000262992:exon5:c.C369T:p.D123D,ENSG00000109452:ENST00000508116:exon6:c.C369T:p.D123D,ENSG00000109452:ENST00000510812:exon6:c.C369T:p.D123D,ENSG00000109452:ENST00000512630:exon6:c.C369T:p.D123D,ENSG00000109452:ENST00000509777:exon7:c.C369T:p.D123D,ENSG00000109452:ENST00000513000:exon8:c.C369T:p.D123D	Score=644;Name=lod=554	NA	4q31.21	NA	NA	NA	NA	rs1982966	0.25	0.25	0.224	0.252596	0.3489	0.2907	0.2378	0.0318	0.4233	0.38	0.28	0.25	0.03	0.3155	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.762261	NA	NA	0.346512	0.084884	ID=COSM149743;OCCURENCE=1(stomach)	0.275	NA	5.6557546
1086	17	48243461	48243461	G	A	intronic	SGCA	NA	NA	NA	exonic	ENSG00000108823	NA	synonymous SNV	ENSG00000108823:ENST00000514934:exon1:c.G60A:p.A20A	NA	NA	17q21.33	NA	NA	Name=4	NA	rs79410682	0.03	0.03	0.029	0.0283546	0.0606	NA	0.0245	0.0061	0.0573	0.06	NA	0.02	0.01	0.0544	0.063	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.373021	NA	NA	0.062674	0.01271	NA	0.058	NA	5.6556593
1086	19	8398121	8398121	G	A	intronic	KANK3	NA	NA	NA	intronic	ENSG00000186994	NA	NA	NA	NA	NA	19p13.2	NA	Name=USF-1	Name=4	NA	rs7248298	0.12	0.12	0.115	0.129792	0.1153	0.0327	0.1239	0.2413	0.0982	0.11	0.03	0.14	0.23	0.1254	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.12534	NA	NA	0.103981	0.195155	NA	0.13	NA	5.655319
1086	14	23341666	23341666	G	C	intronic	LRP10	NA	NA	NA	intronic	ENSG00000197324	NA	NA	NA	NA	NA	14q11.2	NA	Name=Ini1,STAT1,Pol2	Name=34	NA	rs8011536	0.25	0.25	0.246	0.246206	0.3449	0.0536	0.2536	0.3215	0.2362	0.35	0.06	0.28	0.3	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.185258	NA	NA	NA	NA	NA	0.203	NA	5.6551
1086	14	96772075	96772075	G	A	exonic	ATG2B	NA	synonymous SNV	ATG2B:NM_018036:exon31:c.C4584T:p.P1528P	exonic	ENSG00000066739	NA	synonymous SNV	ENSG00000066739:ENST00000359933:exon31:c.C4584T:p.P1528P	NA	NA	14q32.2	NA	NA	NA	NA	rs146028674	0.0023	0.0023	NA	0.00199681	0.006	NA	0.0058	NA	NA	0.004	NA	0.01	NA	0.0022	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.060957	NA	NA	0.003372	0.001589	NA	NA	NA	5.6550946
1086	9	20414298	20414298	A	G	exonic	MLLT3	NA	synonymous SNV	MLLT3:NM_004529:exon5:c.T546C:p.S182S	exonic	ENSG00000171843	NA	synonymous SNV	ENSG00000171843:ENST00000380338:exon5:c.T546C:p.S182S,ENSG00000171843:ENST00000429426:exon5:c.T537C:p.S179S	NA	NA	9p21.3	NA	NA	NA	NA	rs143254940	NA	NA	NA	0.00139776	0.005	NA	0.0014	0.0008	NA	NA	NA	NA	NA	0.0027	0.004	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.504768	NA	NA	0.003954	0.001135	ID=COSM1569325;OCCURENCE=1(large_intestine)	NA	NA	5.6550126
1087	21	47664746	47664746	C	T	exonic	MCM3AP	NA	synonymous SNV	MCM3AP:NM_003906:exon23:c.G5013A:p.P1671P	exonic	ENSG00000160294	NA	synonymous SNV	ENSG00000160294:ENST00000291688:exon23:c.G5013A:p.P1671P,ENSG00000160294:ENST00000397708:exon24:c.G5013A:p.P1671P	NA	NA	21q22.3	NA	NA	NA	NA	rs17183255	0.0014	0.0014	0.002	0.000998403	0.005	NA	NA	NA	NA	0.004	NA	NA	NA	0.0023	0.0045	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.475805	NA	NA	0.004535	0.001362	NA	NA	NA	5.6548316
1087	16	28619920	28619920	A	G	exonic	SULT1A1	NA	synonymous SNV	SULT1A1:NM_177534:exon2:c.T153C:p.T51T,SULT1A1:NM_001055:exon3:c.T153C:p.T51T,SULT1A1:NM_177529:exon3:c.T153C:p.T51T,SULT1A1:NM_177530:exon3:c.T153C:p.T51T	exonic	ENSG00000196502	NA	synonymous SNV	ENSG00000196502:ENST00000569554:exon2:c.T153C:p.T51T,ENSG00000196502:ENST00000314752:exon3:c.T153C:p.T51T,ENSG00000196502:ENST00000395607:exon3:c.T153C:p.T51T,ENSG00000196502:ENST00000566189:exon3:c.T153C:p.T51T,ENSG00000196502:ENST00000395609:exon5:c.T153C:p.T51T	Score=425;Name=lod=71	NA	16p11.2	NA	NA	NA	NA	rs1126446	0.21	0.21	0.099	0.290735	0.335	0.2669	0.4769	0.2292	0.2209	0.25	0.17	0.29	0.13	0.3516	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.202313	NA	NA	0.325349	0.194811	ID=COSM148064;OCCURENCE=1(stomach)	0.167	NA	5.6547176
1087	11	2424727	2424727	C	T	exonic	TSSC4	NA	synonymous SNV	TSSC4:NM_005706:exon2:c.C864T:p.V288V	exonic	ENSG00000184281	NA	synonymous SNV	ENSG00000184281:ENST00000451491:exon2:c.C864T:p.V288V,ENSG00000184281:ENST00000333256:exon3:c.C864T:p.V288V,ENSG00000184281:ENST00000380996:exon4:c.C672T:p.V224V	NA	NA	11p15.5	NA	NA	NA	NA	rs2234285	0.02	0.02	0.027	0.0295527	0.002	NA	0.0101	0.1051	NA	NA	NA	0.01	0.09	0.0094	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.184055	NA	NA	0.000582	0.084433	ID=COSM428849;OCCURENCE=1(breast)	0.029	NA	5.6546846
1087	16	20996525	20996525	G	A	exonic	DNAH3	NA	synonymous SNV	DNAH3:NM_017539:exon48:c.C7539T:p.D2513D	exonic	ENSG00000158486	NA	synonymous SNV	ENSG00000158486:ENST00000261383:exon48:c.C7539T:p.D2513D	NA	NA	16p12.3	NA	NA	NA	NA	rs139502385	0.0032	0.0032	0.004	0.00159744	0.005	NA	0.0029	NA	0.001	0.01	NA	0.01	NA	0.0029	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.247373	NA	NA	0.004419	0.001817	ID=COSM434832,COSM434831;OCCURENCE=1(breast)	NA	NA	5.6543476
1087	5	133901934	133901934	C	T	exonic	PHF15	NA	synonymous SNV	PHF15:NM_015288:exon9:c.C1098T:p.D366D	exonic	ENSG00000043143	NA	synonymous SNV	ENSG00000043143:ENST00000282605:exon9:c.C1098T:p.D366D,ENSG00000043143:ENST00000361895:exon9:c.C1098T:p.D366D,ENSG00000043143:ENST00000395003:exon9:c.C1098T:p.D366D,ENSG00000043143:ENST00000402835:exon9:c.C1098T:p.D366D	NA	NA	5q31.1	NA	NA	NA	NA	rs148155246	0.0018	0.0018	NA	0.000798722	0.004	NA	NA	NA	NA	0.01	NA	NA	NA	0.0046	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.824129	NA	NA	0.003721	0.000454	NA	NA	NA	5.6543456
1087	16	28898793	28898793	T	C	exonic	ATP2A1	NA	synonymous SNV	ATP2A1:NM_004320:exon8:c.T678C:p.T226T,ATP2A1:NM_173201:exon8:c.T678C:p.T226T	exonic	ENSG00000196296	NA	synonymous SNV	ENSG00000196296:ENST00000536376:exon6:c.T303C:p.T101T,ENSG00000196296:ENST00000357084:exon8:c.T678C:p.T226T,ENSG00000196296:ENST00000395503:exon8:c.T678C:p.T226T	NA	NA	16p11.2	NA	NA	NA	NA	rs6565259	0.33	0.33	0.286	0.338858	0.3131	0.1617	0.4942	0.5189	0.1943	0.32	0.17	0.4	0.48	0.3482	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.967344	NA	NA	0.351163	0.506372	NA	0.326	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000082700.1;CLNDSDB=.;CLNDSDBID=.	5.6542036
1087	16	85720945	85720945	C	T	intronic	GINS2	NA	NA	NA	intronic	ENSG00000131153	NA	NA	NA	NA	NA	16q24.1	NA	Name=Egr-1,ZNF263,Sin3Ak-20,c-Myc	Name=19	NA	rs3815796	0.37	0.37	0.358	0.405152	0.3459	0.4683	0.3818	0.3555	0.4847	0.36	0.45	0.35	0.3	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.475445	NA	NA	NA	NA	NA	0.341	NA	5.6541
1087	2	43804229	43804229	T	C	exonic	THADA	NA	synonymous SNV	THADA:NM_001083953:exon10:c.A969G:p.G323G,THADA:NM_001271643:exon10:c.A969G:p.G323G,THADA:NM_001271644:exon10:c.A969G:p.G323G,THADA:NM_022065:exon10:c.A969G:p.G323G	exonic	ENSG00000115970	NA	synonymous SNV	ENSG00000115970:ENST00000330266:exon1:c.A99G:p.G33G,ENSG00000115970:ENST00000402360:exon9:c.A969G:p.G323G,ENSG00000115970:ENST00000474159:exon9:c.A969G:p.G323G,ENSG00000115970:ENST00000404790:exon10:c.A969G:p.G323G,ENSG00000115970:ENST00000405006:exon10:c.A969G:p.G323G,ENSG00000115970:ENST00000405975:exon10:c.A969G:p.G323G,ENSG00000115970:ENST00000415080:exon10:c.A99G:p.G33G,ENSG00000115970:ENST00000403856:exon11:c.A969G:p.G323G	Score=475;Name=lod=114	NA	2p21	NA	NA	NA	NA	rs13021894	0.35	0.35	0.363	0.377396	0.341	0.2659	0.245	0.5136	0.4397	0.34	0.29	0.28	0.49	0.3321	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.487808	NA	NA	0.339491	0.460466	NA	0.362	NA	5.6540756
1087	1	247835885	247835885	G	C	exonic	OR13G1	NA	synonymous SNV	OR13G1:NM_001005487:exon1:c.C459G:p.S153S	exonic	ENSG00000197437	NA	synonymous SNV	ENSG00000197437:ENST00000359688:exon1:c.C459G:p.S153S	NA	NA	1q44	NA	NA	NA	NA	rs150242376	0.0009	0.0009	NA	0.000798722	0.004	NA	NA	NA	NA	0.0026	NA	NA	NA	0.0036	0.0052	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.10829	NA	NA	0.005233	0.000681	NA	NA	NA	5.6538336
1087	10	48370595	48370595	G	A	exonic	ZNF488	NA	synonymous SNV	ZNF488:NM_153034:exon2:c.G63A:p.G21G	exonic	ENSG00000165388	NA	synonymous SNV	ENSG00000165388:ENST00000395702:exon2:c.G63A:p.G21G,ENSG00000165388:ENST00000425196:exon2:c.G63A:p.G21G,ENSG00000165388:ENST00000444585:exon2:c.G63A:p.G21G,ENSG00000165388:ENST00000494156:exon2:c.G63A:p.G21G,ENSG00000165388:ENST00000412534:exon3:c.G63A:p.G21G,ENSG00000165388:ENST00000433077:exon3:c.G63A:p.G21G,ENSG00000165388:ENST00000436850:exon3:c.G63A:p.G21G,ENSG00000165388:ENST00000442001:exon3:c.G63A:p.G21G	NA	NA	10q11.22	NA	NA	Name=2	NA	rs11204210	0.36	0.36	0.328	0.366813	0.329	0.4812	0.2421	0.3396	0.4131	0.34	0.49	0.27	0.3	0.3496	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.014417	NA	NA	0.334574	0.343324	ID=COSM427587;OCCURENCE=2(breast)	0.319	NA	5.6534926
1087	12	51089734	51089734	T	A	exonic	DIP2B	NA	synonymous SNV	DIP2B:NM_173602:exon16:c.T1917A:p.T639T	exonic	ENSG00000066084	NA	synonymous SNV	ENSG00000066084:ENST00000301180:exon16:c.T1917A:p.T639T	Score=546;Name=lod=221	NA	12q13.12	NA	NA	NA	NA	rs11169524	0.32	0.32	0.329	0.320687	0.3449	0.256	0.2752	0.3298	0.3824	0.33	0.31	0.27	0.35	0.3183	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.256133	1.256133	NA	0.35	0.32138	NA	0.297	NA	5.6534666
1087	3	54157710	54157710	A	T	intronic	CACNA2D3	NA	NA	NA	intronic	ENSG00000157445	NA	NA	NA	Score=378;Name=lod=46	NA	3p21.1	NA	NA	Name=5	NA	rs2290132	0.27	0.27	0.26	0.25619	0.3469	0.1895	0.304	0.208	0.2628	0.37	0.17	0.27	0.23	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.359363	3.359363	NA	NA	NA	NA	0.297	NA	5.6531
1087	5	32093082	32093082	G	T	exonic	PDZD2	NA	synonymous SNV	PDZD2:NM_178140:exon20:c.G7797T:p.S2599S	exonic	ENSG00000133401	NA	synonymous SNV	ENSG00000133401:ENST00000282493:exon20:c.G7797T:p.S2599S,ENSG00000133401:ENST00000438447:exon21:c.G7797T:p.S2599S	NA	NA	5p13.3	NA	NA	NA	NA	rs149447762	0.0023	0.0023	NA	0.00199681	0.005	NA	0.0043	0.0008	0.001	0.0026	NA	0.01	0.002	0.0037	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.186449	NA	NA	0.005465	0.001362	NA	NA	NA	5.6525016
1087	19	37004938	37004938	T	C	exonic	ZNF260	NA	synonymous SNV	ZNF260:NM_001166037:exon3:c.A1203G:p.S401S,ZNF260:NM_001166038:exon3:c.A1203G:p.S401S,ZNF260:NM_001012756:exon4:c.A1203G:p.S401S,ZNF260:NM_001166036:exon4:c.A1203G:p.S401S	exonic	ENSG00000254004	NA	synonymous SNV	ENSG00000254004:ENST00000593142:exon2:c.A1203G:p.S401S,ENSG00000254004:ENST00000523638:exon3:c.A1203G:p.S401S,ENSG00000254004:ENST00000588993:exon3:c.A1203G:p.S401S,ENSG00000254004:ENST00000592282:exon4:c.A1203G:p.S401S	NA	NA	19q13.12	NA	Name=SETDB1,ZNF274,KAP1	NA	NA	rs2967505	0.33	0.33	0.346	0.345048	0.3479	0.245	0.2478	0.4153	0.4192	0.33	0.23	0.28	0.48	0.3264	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.513688	NA	NA	0.340233	0.41557	NA	0.268	NA	5.6521336
1087	10	100148058	100148058	T	C	intronic	PYROXD2	NA	NA	NA	intronic	ENSG00000119943	NA	NA	NA	NA	NA	10q24.2	NA	Name=CTCF	Name=9	NA	rs4539242	0.55	0.55	0.531	0.599441	0.3479	0.5833	0.5403	0.8752	0.544	0.35	0.59	0.5	0.87	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.073279	NA	NA	NA	NA	NA	0.464	NA	5.6521
1087	19	900516	900516	C	T	intronic	R3HDM4	NA	NA	NA	intronic	ENSG00000198858	NA	NA	NA	NA	NA	19p13.3	NA	Name=Egr-1	Name=29	NA	rs3102829	0.35	0.35	0.335	0.376797	0.3479	0.2202	0.4409	0.4728	0.3926	0.34	0.22	0.44	0.48	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.784933	NA	NA	NA	NA	NA	0.348	NA	5.6521
1087	3	129823057	129823057	C	T	ncRNA_exonic	FAM86HP	NA	NA	NA	ncRNA_exonic	ENSG00000253540	NA	NA	NA	Score=468;Name=lod=106	NA	3q22.1	NA	NA	NA	NA	rs113156717	NA	NA	0.007	0.00399361	0.0149	NA	0.0029	NA	0.0031	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.253316	NA	0	NA	NA	NA	NA	NA	5.6517666
1087	12	100561360	100561360	C	T	ncRNA_exonic	GOLGA2P5	NA	NA	NA	ncRNA_exonic	ENSG00000238105	NA	NA	NA	Score=381;Name=lod=47	NA	12q23.1	NA	NA	NA	NA	rs147182760	0.01	0.01	0.01	0.00439297	0.0149	NA	0.0058	NA	0.0031	0.01	NA	0.01	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.073557	NA	NA	NA	NA	NA	0.007	NA	5.6517666
1087	4	123377482	123377482	C	A	exonic	IL2	NA	synonymous SNV	IL2:NM_000586:exon1:c.G114T:p.L38L	exonic	ENSG00000109471	NA	synonymous SNV	ENSG00000109471:ENST00000226730:exon1:c.G114T:p.L38L	NA	NA	4q27	NA	NA	Name=2	NA	rs2069763	0.34	0.34	0.316	0.298722	0.3449	0.4613	0.4366	0.0772	0.2853	0.35	0.51	0.41	0.09	0.3461	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.719246	1.719246	NA	0.324535	0.126645	NA	0.326	NA	5.6511316
1087	1	200877786	200877786	T	C	intronic	C1orf106	NA	NA	NA	intronic	ENSG00000163362	NA	NA	NA	NA	NA	1q32.1	NA	Name=GATA3_(SC-268),c-Myc,p300	Name=7	NA	rs2279837	0.25	0.25	0.189	0.225839	0.3489	0.1458	0.4193	0.0741	0.2495	0.36	0.15	0.38	0.08	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.3358	NA	NA	NA	NA	NA	0.297	NA	5.6511
1087	5	176314639	176314639	G	A	exonic	HK3	NA	synonymous SNV	HK3:NM_002115:exon11:c.C1413T:p.A471A	exonic	ENSG00000160883	NA	synonymous SNV	ENSG00000160883:ENST00000292432:exon11:c.C1413T:p.A471A	NA	NA	5q35.2	NA	Name=CTCF_(SC-5916),Rad21,CTCF	NA	NA	rs6875296	0.31	0.31	0.268	0.303115	0.326	0.3929	0.4294	0.0756	0.4049	0.33	0.38	0.45	0.07	0.3491	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.354981	NA	NA	0.340661	0.126872	ID=COSM449368,COSM1486620;OCCURENCE=1(breast)	0.297	NA	5.6509056
1087	15	42167165	42167165	T	C	exonic	SPTBN5	NA	synonymous SNV	SPTBN5:NM_016642:exon23:c.A4377G:p.K1459K	exonic	ENSG00000137877	NA	synonymous SNV	ENSG00000137877:ENST00000320955:exon23:c.A4377G:p.K1459K	NA	NA	15q15.1	NA	NA	NA	NA	rs111958620	0.0023	0.0023	NA	0.00259585	0.004	NA	0.0043	NA	0.0061	0.004	NA	0.01	NA	0.0059	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.231043	NA	NA	0.005874	0.000493	NA	0.007	NA	5.6508926
1087	7	72985185	72985185	G	A	exonic	TBL2	NA	synonymous SNV	TBL2:NM_012453:exon7:c.C996T:p.A332A	exonic	ENSG00000106638	NA	synonymous SNV	ENSG00000106638:ENST00000305632:exon7:c.C996T:p.A332A,ENSG00000106638:ENST00000432538:exon7:c.C888T:p.A296A	NA	NA	7q11.23	NA	NA	NA	NA	rs146437532	0.0046	0.0046	0.001	0.00279553	0.005	NA	0.013	NA	NA	0.004	NA	0.02	NA	0.0047	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.243823	NA	NA	0.006164	0.001816	NA	NA	NA	5.6508026
1087	2	83084389	83084389	G	A	ncRNA_exonic	LOC1720	NA	NA	NA	ncRNA_exonic	ENSG00000168129	NA	NA	NA	Score=371;Name=lod=43	NA	2p12	NA	NA	NA	NA	rs35227268	0.01	0.01	0.006	0.00658946	0.0159	NA	0.0159	NA	0.0061	0.01	NA	0.01	0.002	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.466679	NA	NA	NA	NA	NA	NA	NA	5.6507666
1087	7	44282877	44282877	A	G	exonic	CAMK2B	NA	synonymous SNV	CAMK2B:NM_001220:exon8:c.T573C:p.Y191Y,CAMK2B:NM_172078:exon8:c.T573C:p.Y191Y,CAMK2B:NM_172079:exon8:c.T573C:p.Y191Y,CAMK2B:NM_172080:exon8:c.T573C:p.Y191Y,CAMK2B:NM_172081:exon8:c.T573C:p.Y191Y,CAMK2B:NM_172082:exon8:c.T573C:p.Y191Y,CAMK2B:NM_172083:exon8:c.T573C:p.Y191Y,CAMK2B:NM_172084:exon8:c.T573C:p.Y191Y	exonic	ENSG00000058404	NA	synonymous SNV	ENSG00000058404:ENST00000502837:exon6:c.T186C:p.Y62Y,ENSG00000058404:ENST00000258682:exon8:c.T573C:p.Y191Y,ENSG00000058404:ENST00000346990:exon8:c.T573C:p.Y191Y,ENSG00000058404:ENST00000347193:exon8:c.T573C:p.Y191Y,ENSG00000058404:ENST00000350811:exon8:c.T573C:p.Y191Y,ENSG00000058404:ENST00000353185:exon8:c.T573C:p.Y191Y,ENSG00000058404:ENST00000353625:exon8:c.T573C:p.Y191Y,ENSG00000058404:ENST00000358707:exon8:c.T573C:p.Y191Y,ENSG00000058404:ENST00000395747:exon8:c.T573C:p.Y191Y,ENSG00000058404:ENST00000395749:exon8:c.T573C:p.Y191Y,ENSG00000058404:ENST00000440254:exon8:c.T573C:p.Y191Y,ENSG00000058404:ENST00000457475:exon8:c.T573C:p.Y191Y	Score=423;Name=lod=70	NA	7p13	NA	NA	NA	NA	rs11542227	0.22	0.22	0.194	0.209864	0.3588	0.1131	0.2233	0.0976	0.2986	0.34	0.13	0.25	0.11	0.2987	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.453553	1.453553	NA	0.358488	0.131185	NA	0.283	NA	5.6506786
1087	12	120650421	120650421	C	T	ncRNA_exonic	PXN-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000255857	NA	NA	NA	NA	NA	12q24.23	NA	Name=Pol2-4H8,Pol2	NA	NA	rs79483820	0.03	0.03	0.035	0.0363419	NA	0.1071	0.0173	0.0045	0.0573	NA	0.11	0.01	0.0041	0.0146	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.025363	NA	NA	0.001558	0.002941	NA	0.022	NA	5.6505086
1087	17	73646780	73646780	G	A	exonic	RECQL5	NA	synonymous SNV	RECQL5:NM_001003715:exon9:c.C1248T:p.H416H	exonic	ENSG00000108469	NA	synonymous SNV	ENSG00000108469:ENST00000340830:exon9:c.C1248T:p.H416H,ENSG00000108469:ENST00000584999:exon9:c.C1248T:p.H416H	NA	NA	17q25.1	NA	NA	NA	NA	rs57608326	0.02	0.02	0.03	0.0363419	NA	NA	0.0173	0.1188	0.0133	NA	NA	0.02	0.09	0.0153	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.60939	NA	NA	0.001047	0.121652	NA	0.043	NA	5.6503196
1087	10	98180613	98180613	A	G	intronic	TLL2	NA	NA	NA	intronic	ENSG00000095587	NA	NA	NA	NA	NA	10q24.1	NA	Name=p300	Name=6	NA	rs3789951	0.3	0.3	0.303	0.287141	0.3499	0.252	0.2536	0.3177	0.2413	0.35	0.24	0.26	0.31	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.089921	NA	NA	NA	NA	NA	0.37	NA	5.6501
1087	15	79750127	79750127	A	G	exonic	KIAA1024	NA	synonymous SNV	KIAA1024:NM_015206:exon2:c.A1638G:p.G546G	exonic	ENSG00000169330	NA	synonymous SNV	ENSG00000169330:ENST00000559272:exon1:c.A1638G:p.G546G,ENSG00000169330:ENST00000305428:exon2:c.A1638G:p.G546G	Score=399;Name=lod=56	NA	15q25.1	NA	NA	NA	NA	rs2902954	0.34	0.34	0.332	0.314696	0.3698	0.5704	0.304	0.0976	0.2955	0.36	0.58	0.26	0.1	0.3149	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.623103	NA	NA	0.332169	0.134107	ID=COSM434389;OCCURENCE=1(breast)	0.217	NA	5.6497976
1087	14	35409317	35409317	A	G	ncRNA_exonic	IGBP1P1	NA	NA	NA	ncRNA_exonic	ENSG00000226677	NA	NA	NA	Score=597;Name=lod=357	NA	14q13.2	NA	NA	NA	NA	rs141340336	0.01	0.01	0.003	0.0133786	0.0169	NA	0.0115	0.0008	0.0419	0.02	NA	0.01	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.481315	NA	NA	NA	NA	NA	NA	NA	5.6497666
1087	12	72666499	72666499	A	G	ncRNA_exonic	TRHDE-AS1	NA	NA	NA	ncRNA_UTR5	ENSG00000072657	NA	NA	NA	Score=588;Name=lod=326	NA	12q21.1	NA	Name=CTCF	NA	NA	rs79761722	0.44	0.44	NA	0.839657	0.8171	0.9177	0.8545	0.7958	0.8313	0.43	0.51	0.44	0.38	0.1999	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.432127	NA	NA	NA	NA	NA	0.058	NA	5.6496666
1087	19	51875732	51875732	G	A	exonic	NKG7	NA	synonymous SNV	NKG7:NM_005601:exon1:c.C58T:p.L20L	exonic	ENSG00000105374	NA	synonymous SNV	ENSG00000105374:ENST00000221978:exon1:c.C58T:p.L20L,ENSG00000105374:ENST00000595217:exon1:c.C58T:p.L20L,ENSG00000105374:ENST00000600427:exon1:c.C58T:p.L20L	NA	NA	19q13.41	NA	NA	NA	NA	rs147628882	0.0037	0.0037	NA	0.00239617	0.008	NA	0.0043	NA	0.001	0.01	NA	0.01	NA	0.0039	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.494658	NA	NA	0.005116	0.001135	NA	NA	NA	5.6496506
1087	3	113377361	113377361	A	G	exonic	KIAA2018	NA	synonymous SNV	KIAA2018:NM_001009899:exon7:c.T3168C:p.N1056N	exonic	ENSG00000176542	NA	synonymous SNV	ENSG00000176542:ENST00000478658:exon5:c.T3168C:p.N1056N,ENSG00000176542:ENST00000316407:exon7:c.T3168C:p.N1056N	Score=295;Name=lod=21	NA	3q13.2	NA	NA	NA	NA	rs9813630	0.35	0.35	0.331	0.304313	0.3569	0.2183	0.2709	0.4387	0.181	0.39	0.23	0.28	0.47	0.3226	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.019422	NA	NA	0.337933	0.39731	NA	0.203	NA	5.6492336
1087	21	35821849	35821849	C	T	exonic	KCNE1	NA	synonymous SNV	KCNE1:NM_001127670:exon2:c.G84A:p.S28S,KCNE1:NM_001270404:exon2:c.G84A:p.S28S,KCNE1:NM_001127668:exon3:c.G84A:p.S28S,KCNE1:NM_001127669:exon3:c.G84A:p.S28S,KCNE1:NM_001270402:exon3:c.G84A:p.S28S,KCNE1:NM_001270403:exon3:c.G84A:p.S28S,KCNE1:NM_001270405:exon3:c.G84A:p.S28S,KCNE1:NM_000219:exon4:c.G84A:p.S28S	exonic	ENSG00000180509	NA	synonymous SNV	ENSG00000180509:ENST00000416357:exon2:c.G84A:p.S28S,ENSG00000180509:ENST00000337385:exon3:c.G84A:p.S28S,ENSG00000180509:ENST00000399284:exon3:c.G84A:p.S28S,ENSG00000180509:ENST00000399289:exon3:c.G84A:p.S28S,ENSG00000180509:ENST00000432085:exon3:c.G84A:p.S28S,ENSG00000180509:ENST00000399286:exon4:c.G84A:p.S28S	NA	NA	21q22.12	NA	NA	NA	NA	rs17173510	0.0041	0.0041	NA	0.00379393	0.0089	NA	0.0144	NA	NA	0.01	NA	0.01	NA	0.0036	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.155574	NA	NA	0.005581	0.001362	NA	0.007	NA	5.6485856
1087	5	37506547	37506547	A	G	intronic	WDR70	NA	NA	NA	ncRNA_exonic	ENSG00000248216	NA	NA	NA	Score=778;Name=lod=1935	NA	5p13.2	NA	NA	Name=4	NA	rs56305849	0.57	0.57	0.572	0.564497	0.6849	0.5109	0.696	0.3328	0.7157	0.7	0.56	0.64	0.33	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.281705	2.281705	NA	NA	NA	NA	0.529	NA	5.6484333
1087	9	139407932	139407932	A	G	exonic	NOTCH1	NA	synonymous SNV	NOTCH1:NM_017617:exon14:c.T2265C:p.N755N	exonic	ENSG00000148400	NA	synonymous SNV	ENSG00000148400:ENST00000277541:exon14:c.T2265C:p.N755N	Score=540;Name=lod=208	NA	9q34.3	NA	NA	NA	NA	rs2229971	0.56	0.56	0.536	0.527756	0.335	0.7768	0.4784	0.6997	0.272	0.33	0.78	0.46	0.7	0.3977	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.20382	NA	NA	0.285831	0.615578	NA	0.478	NA	5.6481356
1087	8	42323380	42323380	C	T	exonic	SLC20A2	NA	synonymous SNV	SLC20A2:NM_001257180:exon3:c.G345A:p.T115T,SLC20A2:NM_001257181:exon3:c.G345A:p.T115T,SLC20A2:NM_006749:exon3:c.G345A:p.T115T	exonic	ENSG00000168575	NA	synonymous SNV	ENSG00000168575:ENST00000342228:exon3:c.G345A:p.T115T,ENSG00000168575:ENST00000520179:exon3:c.G345A:p.T115T,ENSG00000168575:ENST00000520262:exon3:c.G345A:p.T115T	NA	NA	8p11.21	NA	NA	NA	NA	rs34124953	0.0014	0.0014	NA	0.00519169	0.004	NA	NA	NA	0.0225	0.004	NA	NA	NA	0.007	0.0077	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.033093	NA	NA	0.007674	0.000227	NA	NA	NA	5.6479926
1087	15	37109884	37109884	G	A	ncRNA_intronic	CSNK1A1P1	NA	NA	NA	ncRNA_exonic	ENSG00000223518	NA	NA	NA	Score=775;Name=lod=1884	NA	15q14	NA	NA	NA	NA	rs138134049	0.01	0.01	0.007	0.00599042	0.0189	NA	0.013	NA	0.002	0.02	NA	0.02	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.870072	2.870072	NA	NA	NA	NA	0.014	NA	5.6477666
1087	17	14005439	14005439	G	A	exonic	COX10	NA	synonymous SNV	COX10:NM_001303:exon4:c.G504A:p.L168L	exonic	ENSG00000006695	NA	stopgain	ENSG00000006695:ENST00000580561:exon3:c.G182A:p.W61X	NA	NA	17p12	NA	NA	Name=19	NA	rs2159132	0.49	0.49	0.499	0.491813	0.5855	0.3462	0.4813	0.5053	0.5348	0.57	0.38	0.51	0.5	0.5223	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.483223	NA	NA	0.578488	0.510667	NA	0.58	NA	5.6470453
1087	17	4918122	4918122	A	G	exonic	KIF1C	NA	synonymous SNV	KIF1C:NM_006612:exon18:c.A1656G:p.P552P	exonic	ENSG00000129250	NA	synonymous SNV	ENSG00000129250:ENST00000320785:exon18:c.A1656G:p.P552P	NA	NA	17p13.2	NA	NA	NA	NA	rs57144955	0.02	0.02	0.024	0.0339457	0.001	NA	0.0101	0.1225	NA	0.0013	NA	0.01	0.1	0.0183	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.789383	NA	NA	0.000465	0.103041	NA	0.065	NA	5.6469016
1087	19	7809079	7809079	T	C	exonic	CD209	NA	synonymous SNV	CD209:NM_001144893:exon4:c.A519G:p.R173R,CD209:NM_001144894:exon4:c.A795G:p.R265R,CD209:NM_001144896:exon5:c.A855G:p.R285R,CD209:NM_001144895:exon6:c.A651G:p.R217R,CD209:NM_001144897:exon6:c.A909G:p.R303R,CD209:NM_001144899:exon6:c.A444G:p.R148R,CD209:NM_021155:exon6:c.A927G:p.R309R	exonic	ENSG00000090659	NA	synonymous SNV	ENSG00000090659:ENST00000204801:exon4:c.A795G:p.R265R,ENSG00000090659:ENST00000593660:exon4:c.A717G:p.R239R,ENSG00000090659:ENST00000593821:exon4:c.A519G:p.R173R,ENSG00000090659:ENST00000601951:exon4:c.A855G:p.R285R,ENSG00000090659:ENST00000301357:exon5:c.A519G:p.R173R,ENSG00000090659:ENST00000315591:exon5:c.A855G:p.R285R,ENSG00000090659:ENST00000394161:exon5:c.A219G:p.R73R,ENSG00000090659:ENST00000315599:exon6:c.A927G:p.R309R,ENSG00000090659:ENST00000354397:exon6:c.A909G:p.R303R,ENSG00000090659:ENST00000394173:exon6:c.A444G:p.R148R,ENSG00000090659:ENST00000602261:exon6:c.A651G:p.R217R	NA	NA	19p13.2	NA	NA	NA	NA	rs17159887	0.03	0.03	0.032	0.0359425	0.003	NA	0.0101	0.1286	NA	NA	NA	0.01	0.12	0.0137	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.323748	NA	NA	0.003721	0.110758	NA	0.051	NA	5.6462456
1087	5	159992754	159992754	T	G	exonic	ATP10B	NA	synonymous SNV	ATP10B:NM_025153:exon26:c.A4092C:p.P1364P	exonic	ENSG00000118322	NA	synonymous SNV	ENSG00000118322:ENST00000327245:exon26:c.A4092C:p.P1364P	NA	NA	5q34	NA	Name=ZNF263	NA	NA	rs3812006	0.37	0.37	0.36	0.394768	0.33	0.1706	0.4467	0.615	0.3579	0.32	0.2	0.42	0.59	0.3588	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.276302	NA	NA	0.331683	0.534144	NA	0.435	NA	5.6461836
1087	4	25398292	25398292	G	A	exonic	ANAPC4	NA	synonymous SNV	ANAPC4:NM_013367:exon15:c.G1068A:p.S356S	exonic	ENSG00000053900	NA	synonymous SNV	ENSG00000053900:ENST00000315368:exon15:c.G1068A:p.S356S,ENSG00000053900:ENST00000510092:exon15:c.G1068A:p.S356S	NA	NA	4p15.2	NA	NA	NA	NA	rs34015658	0.03	0.03	0.046	0.0443291	0.005	0.001	0.0173	0.1543	NA	0.0013	NA	0.01	0.14	0.015	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.101766	NA	NA	0.001163	0.113255	NA	0.014	NA	5.6455036
1087	3	4856285	4856285	G	A	intronic	ITPR1	NA	NA	NA	intronic	ENSG00000150995,ENSG00000235978	NA	NA	NA	NA	NA	3p26.1	NA	Name=GTF2B,eGFP-FOS,ELF1_(SC-631),c-Myc,CCNT2,STAT1,ZNF263,HDAC2_(SC-6296),c-Fos,c-Jun,Pol2,SIRT6,p300_(F-4),eGFP-JunB	Name=52	NA	rs76604555	0.08	0.08	0.093	0.104433	0.1143	0.0377	0.1138	0.0756	0.1953	0.11	0.05	0.1	0.06	0.1228	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.424107	3.424107	NA	0.117504	0.075813	NA	0.08	NA	5.645396
1087	19	43433676	43433676	G	C	exonic	PSG7	NA	nonsynonymous SNV	PSG7:NM_001206650:exon2:c.C261G:p.N87K	exonic	ENSG00000221878	NA	unknown	UNKNOWN	NA	NA	19q13.31	NA	NA	NA	NA	rs146569565	0.0041	0.0041	0.002	0.00439297	0.008	0.0079	0.0043	NA	0.0031	0.01	0.0035	0.01	NA	0.0059	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.180333	NA	NA	0.007444	0.00159	NA	NA	NA	5.6453227
1087	8	24300041	24300041	T	C	exonic	ADAM7	NA	synonymous SNV	ADAM7:NM_003817:exon2:c.T108C:p.P36P	exonic	ENSG00000069206	NA	synonymous SNV	ENSG00000069206:ENST00000175238:exon2:c.T108C:p.P36P,ENSG00000069206:ENST00000380789:exon2:c.T108C:p.P36P,ENSG00000069206:ENST00000441335:exon2:c.T108C:p.P36P	NA	NA	8p21.2	NA	NA	NA	NA	rs35180468	0.0037	0.0037	0.004	0.0127796	0.007	0.001	0.0043	0.0023	0.0511	0.01	NA	NA	0.0041	0.0093	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.97618	NA	NA	0.005116	0.000908	NA	0.007	NA	5.6452506
1088	5	446446	446446	C	T	exonic	EXOC3	NA	synonymous SNV	EXOC3:NM_007277:exon2:c.C126T:p.S42S	exonic	ENSG00000180104	NA	synonymous SNV	ENSG00000180104:ENST00000315013:exon1:c.C126T:p.S42S,ENSG00000180104:ENST00000512944:exon2:c.C126T:p.S42S,ENSG00000180104:ENST00000515601:exon2:c.C126T:p.S42S,ENSG00000180104:ENST00000508022:exon3:c.C126T:p.S42S	NA	NA	5p15.33	NA	NA	NA	NA	rs115207857	0.01	0.01	0.015	0.0179712	0.005	NA	0.0029	0.0507	0.0164	0.01	NA	0.0028	0.04	0.0096	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.446416	NA	NA	0.007071	0.03983	NA	0.029	NA	5.6449956
1088	5	76708987	76708987	A	G	exonic	PDE8B	NA	synonymous SNV	PDE8B:NM_001029851:exon14:c.A1473G:p.E491E,PDE8B:NM_001029852:exon16:c.A1599G:p.E533E,PDE8B:NM_001029853:exon16:c.A1704G:p.E568E,PDE8B:NM_001029854:exon16:c.A1623G:p.E541E,PDE8B:NM_003719:exon17:c.A1764G:p.E588E	exonic	ENSG00000113231	NA	synonymous SNV	ENSG00000113231:ENST00000505283:exon4:c.A159G:p.E53E,ENSG00000113231:ENST00000346042:exon14:c.A1473G:p.E491E,ENSG00000113231:ENST00000333194:exon16:c.A1599G:p.E533E,ENSG00000113231:ENST00000340978:exon16:c.A1623G:p.E541E,ENSG00000113231:ENST00000342343:exon16:c.A1704G:p.E568E,ENSG00000113231:ENST00000264917:exon17:c.A1764G:p.E588E	Score=603;Name=lod=376	NA	5q13.3	Score=881;Name=V$OCT1_07	NA	NA	NA	rs335614	0.74	0.74	0.738	0.765176	0.672	0.8175	0.7305	0.8154	0.7638	0.67	0.81	0.71	0.79	0.7031	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.121063	NA	NA	0.64686	0.789378	NA	0.79	NA	5.6447066
1088	1	212515613	212515613	C	T	exonic	PPP2R5A	NA	synonymous SNV	PPP2R5A:NM_001199756:exon4:c.C393T:p.F131F,PPP2R5A:NM_006243:exon4:c.C564T:p.F188F	exonic	ENSG00000066027	NA	synonymous SNV	ENSG00000066027:ENST00000261461:exon4:c.C564T:p.F188F,ENSG00000066027:ENST00000537030:exon4:c.C393T:p.F131F	Score=668;Name=lod=692	NA	1q32.3	NA	NA	NA	NA	rs1774249	0.3	0.3	0.29	0.28155	0.34	0.2837	0.33	0.1853	0.3149	0.35	0.3	0.33	0.2	0.3279	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.110841	NA	NA	0.35407	0.212438	NA	0.217	NA	5.6446966
1088	10	26462790	26462790	G	A	exonic	MYO3A	NA	synonymous SNV	MYO3A:NM_017433:exon30:c.G3597A:p.E1199E	exonic	ENSG00000095777	NA	synonymous SNV	ENSG00000095777:ENST00000265944:exon30:c.G3597A:p.E1199E	NA	NA	10p12.1	NA	NA	NA	NA	rs3740232	0.32	0.32	0.328	0.329073	0.3429	0.3532	0.317	0.2262	0.4376	0.35	0.38	0.28	0.23	0.3445	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.244117	NA	NA	0.335349	0.250794	ID=COSM146911;OCCURENCE=1(stomach),1(large_intestine)	0.312	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000039035.1;CLNDSDB=.;CLNDSDBID=.	5.6439176
1088	9	116356516	116356516	A	G	exonic	RGS3	NA	nonsynonymous SNV	RGS3:NM_144489:exon1:c.A317G:p.Y106C	exonic	ENSG00000138835	NA	nonsynonymous SNV	ENSG00000138835:ENST00000462403:exon1:c.A317G:p.Y106C	NA	NA	9q32	NA	Name=HEY1,FOSL2,Pol2(b),Pol2-4H8,CTCF,TAF1,NRSF,Pol2,TAF7_(SQ-8)	NA	NA	rs12341266	0.94	0.94	0.934	0.956869	0.8817	1	0.9006	0.9909	0.9836	0.88	1	0.9	0.98	0.9258	1	1	T	0.0	B	0.0	B	.	.	1.000	P	0	N	0.29	T	-0.927	T	0.000	T	0.011	-1.898	0.008	-1.2	0.025	0.365	0.510	-1.897697	NA	1	0.882182	0.975931	NA	0.92	NA	5.6436514
1088	11	120929151	120929151	C	G	exonic	TBCEL	NA	synonymous SNV	TBCEL:NM_001130047:exon6:c.C810G:p.T270T,TBCEL:NM_152715:exon6:c.C810G:p.T270T	exonic	ENSG00000154114	NA	synonymous SNV	ENSG00000154114:ENST00000422003:exon6:c.C810G:p.T270T,ENSG00000154114:ENST00000529397:exon6:c.C810G:p.T270T,ENSG00000154114:ENST00000533134:exon6:c.C111G:p.T37T	NA	NA	11q23.3	NA	NA	NA	NA	rs35380371	0.01	0.01	0.006	0.00938498	0.008	NA	0.0072	0.0212	0.0061	0.01	NA	0.01	0.02	0.0069	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.969775	NA	NA	0.00849	0.01793	NA	0.007	NA	5.6432766
1088	16	1584618	1584618	T	C	intronic	IFT140,TMEM204	NA	NA	NA	intronic	ENSG00000131634,ENSG00000187535	NA	NA	NA	NA	NA	16p13.3	NA	Name=CTCF,Max	Name=42	NA	rs2076438	0.51	0.51	0.489	0.529752	0.3569	0.5714	0.4323	0.7345	0.4571	0.36	0.56	0.43	0.72	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.300444	NA	NA	NA	NA	NA	0.42	NA	5.6431
1088	6	31239335	31239335	G	A	intronic	HLA-C	NA	NA	NA	intronic	ENSG00000204525	NA	NA	NA	NA	NA	6p21.33	Score=795;Name=V$ER_Q6	Name=Pol2,Pol2-4H8,NFKB,CTCF	NA	NA	rs17880655	0.22	0.22	0.129	0.200879	0.165	0.4444	0.2277	0.09	0.1176	0.17	0.41	0.2	0.08	0.1923	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.435916	NA	NA	NA	NA	NA	0.029	NA	5.6427
1088	4	109745336	109745336	T	G	exonic	COL25A1	NA	synonymous SNV	COL25A1:NM_001256074:exon32:c.A1848C:p.G616G,COL25A1:NM_032518:exon34:c.A1839C:p.G613G,COL25A1:NM_198721:exon34:c.A1839C:p.G613G	exonic	ENSG00000188517	NA	synonymous SNV	ENSG00000188517:ENST00000399127:exon33:c.A1848C:p.G616G,ENSG00000188517:ENST00000399126:exon35:c.A1839C:p.G613G,ENSG00000188517:ENST00000399132:exon35:c.A1839C:p.G613G	Score=518;Name=lod=170	NA	4q25	NA	NA	NA	NA	rs7689008	0.35	0.35	0.339	0.310104	0.34	0.3502	0.2565	0.3404	0.2352	0.33	0.42	0.3	0.35	0.3279	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.619804	1.619804	NA	0.35613	0.34264	NA	0.362	NA	5.6426366
1088	15	90226947	90226947	C	A	exonic	PEX11A	NA	synonymous SNV	PEX11A:NM_001271572:exon3:c.G312T:p.L104L,PEX11A:NM_003847:exon3:c.G405T:p.L135L	exonic	ENSG00000166821	NA	synonymous SNV	ENSG00000166821:ENST00000300056:exon3:c.G405T:p.L135L,ENSG00000166821:ENST00000561257:exon3:c.G312T:p.L104L	Score=562;Name=lod=256	NA	15q26.1	Score=757;Name=V$PPARA_01	NA	NA	NA	rs7169981	0.52	0.52	0.532	0.505192	0.6958	0.2917	0.4914	0.5431	0.4877	0.7	0.3	0.54	0.48	0.6206	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.908342	NA	NA	0.708304	0.582045	NA	0.572	NA	5.6419626
1088	19	41596133	41596133	A	G	intronic	CYP2A13	NA	NA	NA	intronic	ENSG00000197838	NA	NA	NA	NA	NA	19q13.2	NA	Name=CTCF_(SC-5916),CTCF	Name=2	NA	rs1645690	0.21	0.21	0.176	0.245807	0.1103	0.0823	0.2781	0.5136	0.1687	0.11	0.08	0.22	0.52	0.1532	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.192851	NA	NA	0.095255	0.444343	NA	0.232	NA	5.641245
1088	1	155007293	155007293	C	T	intronic	DCST1	NA	NA	NA	intronic	ENSG00000163357	NA	NA	NA	NA	NA	1q22	NA	Name=GR,CTCF	Name=6	NA	rs4845404	0.54	0.54	0.517	0.565895	0.3588	0.8819	0.5922	0.4266	0.6227	0.36	0.9	0.54	0.41	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.289921	NA	NA	NA	NA	NA	0.464	NA	5.6412
1088	16	28619911	28619911	T	C	exonic	SULT1A1	NA	synonymous SNV	SULT1A1:NM_177534:exon2:c.A162G:p.V54V,SULT1A1:NM_001055:exon3:c.A162G:p.V54V,SULT1A1:NM_177529:exon3:c.A162G:p.V54V,SULT1A1:NM_177530:exon3:c.A162G:p.V54V	exonic	ENSG00000196502	NA	synonymous SNV	ENSG00000196502:ENST00000569554:exon2:c.A162G:p.V54V,ENSG00000196502:ENST00000314752:exon3:c.A162G:p.V54V,ENSG00000196502:ENST00000395607:exon3:c.A162G:p.V54V,ENSG00000196502:ENST00000566189:exon3:c.A162G:p.V54V,ENSG00000196502:ENST00000395609:exon5:c.A162G:p.V54V	Score=425;Name=lod=71	NA	16p11.2	NA	NA	NA	NA	rs1126447	0.24	0.24	0.119	0.290535	0.335	0.2669	0.4769	0.2284	0.2209	0.3	0.19	0.33	0.16	0.3523	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.330308	NA	NA	0.338256	0.200273	ID=COSM148063;OCCURENCE=1(stomach)	0.167	NA	5.6411106
1088	11	60152584	60152584	G	A	exonic	MS4A7	NA	synonymous SNV	MS4A7:NM_021201:exon3:c.G171A:p.L57L,MS4A7:NM_206939:exon3:c.G171A:p.L57L	exonic	ENSG00000166927	NA	synonymous SNV	ENSG00000166927:ENST00000300184:exon3:c.G171A:p.L57L,ENSG00000166927:ENST00000530234:exon3:c.G171A:p.L57L	Score=284;Name=lod=19	NA	11q12.2	NA	NA	NA	NA	rs950802	0.4	0.4	0.421	0.402756	0.339	0.4375	0.3646	0.4569	0.3865	0.34	0.44	0.4	0.45	0.3528	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.337845	NA	NA	0.333837	0.410803	NA	0.493	NA	5.6410296
1088	15	99670518	99670518	T	C	exonic	SYNM	NA	unknown	UNKNOWN	exonic	ENSG00000182253	NA	synonymous SNV	ENSG00000182253:ENST00000560674:exon4:c.T1095C:p.T365T,ENSG00000182253:ENST00000328642:exon5:c.T1950C:p.T650T,ENSG00000182253:ENST00000336292:exon5:c.T1950C:p.T650T	NA	NA	15q26.3	NA	NA	Name=27	NA	rs1670227	0.25	0.25	0.275	0.273562	0.2147	0.0982	0.2579	0.5227	0.1892	0.22	0.08	0.24	0.51	0.245	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.770782	1.770782	NA	0.232978	0.454922	NA	0.21	NA	5.6406553
1088	19	53384185	53384185	C	T	exonic	ZNF320	NA	synonymous SNV	ZNF320:NM_207333:exon4:c.G1194A:p.A398A	exonic	ENSG00000182986	NA	synonymous SNV	ENSG00000182986:ENST00000391781:exon3:c.G1194A:p.A398A,ENSG00000182986:ENST00000595635:exon8:c.G1194A:p.A398A	NA	Name=Alzheimer's disease	19q13.41	NA	Name=ZNF274	NA	NA	rs6509701	0.57	0.57	0.569	0.586262	0.7068	0.3621	0.4712	0.6936	0.6299	0.69	0.34	0.51	0.67	0.6306	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.050572	NA	NA	0.688721	0.674762	NA	0.703	NA	5.6405456
1088	1	161641267	161641267	G	A	exonic	FCGR2B	NA	synonymous SNV	FCGR2B:NM_001190828:exon2:c.G198A:p.G66G,FCGR2B:NM_001002273:exon3:c.G216A:p.G72G,FCGR2B:NM_001002274:exon3:c.G219A:p.G73G,FCGR2B:NM_001002275:exon3:c.G216A:p.G72G,FCGR2B:NM_004001:exon3:c.G219A:p.G73G	exonic	ENSG00000072694	NA	synonymous SNV	ENSG00000072694:ENST00000367960:exon2:c.G198A:p.G66G,ENSG00000072694:ENST00000367961:exon2:c.G198A:p.G66G,ENSG00000072694:ENST00000236937:exon3:c.G219A:p.G73G,ENSG00000072694:ENST00000358671:exon3:c.G219A:p.G73G,ENSG00000072694:ENST00000367962:exon3:c.G219A:p.G73G,ENSG00000072694:ENST00000403078:exon3:c.G219A:p.G73G,ENSG00000072694:ENST00000428605:exon3:c.G219A:p.G73G	NA	NA	1q23.3	NA	NA	NA	NA	rs144573139	0.01	0.01	0.003	0.00379393	0.0139	NA	0.0014	NA	0.0041	0.02	NA	NA	NA	0.0049	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.134527	NA	NA	0.007326	0.000454	NA	NA	NA	5.6405406
1088	9	139252495	139252495	G	A	exonic	GPSM1	NA	synonymous SNV	GPSM1:NM_001145639:exon4:c.G324A:p.P108P,GPSM1:NM_001200003:exon4:c.G324A:p.P108P,GPSM1:NM_001145638:exon14:c.G1851A:p.P617P	exonic	ENSG00000160360	NA	synonymous SNV	ENSG00000160360:ENST00000291775:exon3:c.G324A:p.P108P,ENSG00000160360:ENST00000392944:exon4:c.G324A:p.P108P,ENSG00000160360:ENST00000429455:exon4:c.G324A:p.P108P,ENSG00000160360:ENST00000354753:exon13:c.G1782A:p.P594P,ENSG00000160360:ENST00000440944:exon14:c.G1851A:p.P617P	Score=460;Name=lod=99	NA	9q34.3	Score=903;Name=V$MYOD_01	NA	NA	NA	rs3812547	0.75	0.75	0.778	0.750799	0.673	0.9454	0.5317	0.789	0.7342	0.68	0.92	0.62	0.78	0.6864	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.078636	NA	NA	0.666977	0.770086	NA	0.601	NA	5.6402896
1088	10	95139526	95139526	A	G	intronic	MYOF	NA	NA	NA	intronic	ENSG00000138119	NA	NA	NA	NA	NA	10q23.33	NA	Name=c-Fos	Name=110	NA	rs10882229	0.59	0.59	0.583	0.61861	0.3598	0.8542	0.4726	0.7005	0.635	0.36	0.86	0.45	0.72	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.599438	NA	NA	NA	NA	NA	0.594	NA	5.6402
1088	11	43920997	43920997	G	A	ncRNA_exonic	SEC14L1P1	NA	NA	NA	ncRNA_exonic	ENSG00000213693	NA	NA	NA	Score=799;Name=lod=2356	NA	11p11.2	NA	NA	NA	NA	rs35017547	0.06	0.06	0.045	0.0716853	0.0268	0.0258	0.2075	0.0794	0.0583	0.02	0.03	0.2	0.07	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.153818	NA	NA	NA	NA	NA	0.065	NA	5.6398666
1088	19	42799049	42799049	C	T	exonic	CIC	NA	synonymous SNV	CIC:NM_015125:exon20:c.C4533T:p.I1511I	exonic	ENSG00000079432	NA	synonymous SNV	ENSG00000079432:ENST00000573349:exon5:c.C714T:p.I238I,ENSG00000079432:ENST00000160740:exon20:c.C4527T:p.I1509I,ENSG00000079432:ENST00000575354:exon20:c.C4533T:p.I1511I,ENSG00000079432:ENST00000572681:exon21:c.C7251T:p.I2417I	Score=631;Name=lod=489	NA	19q13.2	NA	NA	NA	NA	rs1052023	0.18	0.18	0.17	0.119808	0.3907	NA	0.1945	0.0106	0.0593	0.4	NA	0.24	0.01	0.2587	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.607799	NA	NA	0.377442	0.076941	NA	0.087	NA	5.6398246
1088	3	191075012	191075012	G	T	intronic	CCDC50	NA	NA	NA	intronic	ENSG00000152492	NA	NA	NA	NA	NA	3q28	NA	Name=AP-2gamma,Rad21,c-Fos	Name=89	NA	rs1520203	0.34	0.34	0.318	0.331669	0.3608	0.2579	0.3545	0.3994	0.2699	0.37	0.22	0.38	0.42	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.982416	NA	NA	NA	NA	NA	0.297	NA	5.6392
1088	19	1827714	1827714	G	C	exonic	REXO1	NA	synonymous SNV	REXO1:NM_020695:exon2:c.C1074G:p.S358S	exonic	ENSG00000079313	NA	synonymous SNV	ENSG00000079313:ENST00000170168:exon2:c.C1074G:p.S358S	NA	NA	19p13.3	NA	NA	NA	NA	rs35091505	0.01	0.01	0.01	0.00379393	0.0089	NA	0.0115	0.0015	NA	0.01	NA	0.02	0.002	0.0084	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.913484	NA	NA	0.010192	0.002878	NA	NA	NA	5.6391746
1088	3	148714104	148714104	A	G	exonic	GYG1	NA	synonymous SNV	GYG1:NM_001184720:exon3:c.A159G:p.T53T,GYG1:NM_001184721:exon3:c.A159G:p.T53T,GYG1:NM_004130:exon3:c.A159G:p.T53T	exonic	ENSG00000163754	NA	synonymous SNV	ENSG00000163754:ENST00000296048:exon3:c.A159G:p.T53T,ENSG00000163754:ENST00000345003:exon3:c.A159G:p.T53T,ENSG00000163754:ENST00000461191:exon3:c.A159G:p.T53T,ENSG00000163754:ENST00000473005:exon3:c.A21G:p.T7T,ENSG00000163754:ENST00000483267:exon3:c.A159G:p.T53T,ENSG00000163754:ENST00000484197:exon3:c.A159G:p.T53T,ENSG00000163754:ENST00000492285:exon4:c.A21G:p.T7T	NA	NA	3q24	NA	NA	NA	NA	rs148619511	0.01	0.01	0.002	0.00279553	0.0089	NA	0.0072	NA	NA	0.01	NA	0.01	NA	0.0071	0.012	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.332152	NA	NA	0.012326	0.003631	NA	NA	NA	5.6383406
1088	11	117973673	117973673	G	A	intronic	TMPRSS4	NA	NA	NA	intronic	ENSG00000137648	NA	NA	NA	NA	NA	11q23.3	NA	Name=HEY1,USF-1,Nrf1,GATA2_(CG2-96),TBP,TAL1_(SC-12984),Egr-1,Pol2-4H8,GATA-2,ELF1_(SC-631),CHD2_(N-1250),p300_(F-4),GATA-1,Pol2,NRSF,SP1	Name=4	NA	rs2276129	0.35	0.35	0.329	0.327276	0.3618	0.3661	0.3386	0.3094	0.2679	0.37	0.34	0.38	0.31	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.242512	NA	NA	NA	NA	NA	0.449	NA	5.6382
1088	14	107083095	107083095	G	A	intergenic	LINC00221,NONE	dist=131566;dist=NONE	NA	NA	intronic	ENSG00000224373	NA	NA	NA	NA	NA	14q32.33	NA	Name=ZNF263,CTCF_(SC-5916),CTCF_(C-20),Znf143_(16618-1-AP),CTCFL_(SC-98982),Rad21,CTCF	Name=31	NA	rs111745680	0.02	0.02	0.013	0.0181709	0.0288	NA	0.0418	0.0008	0.0327	0.02	0.0017	0.05	NA	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.534475	NA	NA	NA	NA	NA	0.029	NA	5.6378667
1088	19	46313758	46313758	G	C	intronic	RSPH6A	NA	NA	NA	intronic	ENSG00000104941	NA	NA	NA	NA	NA	19q13.32	NA	Name=CEBPB,CTCF,GR	Name=37	NA	rs10402263	0.45	0.45	0.431	0.424521	0.3628	0.5427	0.4438	0.4145	0.3661	0.37	0.59	0.44	0.42	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.245889	NA	NA	NA	NA	NA	0.384	NA	5.6372
1088	8	131138344	131138344	A	C	intronic	ASAP1	NA	NA	NA	intronic	ENSG00000153317	NA	NA	NA	Score=544;Name=lod=217	NA	8q24.21	NA	NA	Name=81	NA	rs2305510	0.1	0.1	0.098	0.130192	0.1282	0.1577	0.049	0.0219	0.3078	0.13	0.17	0.06	0.02	0.1284	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.517634	2.517634	NA	0.106395	0.047208	NA	0.08	NA	5.637005
1088	4	106534691	106534691	A	G	intronic	ARHGEF38	NA	NA	NA	intronic	ENSG00000236699	NA	NA	NA	NA	NA	4q24	NA	Name=GATA3_(SC-268)	Name=28	NA	rs2305212	0.1	0.1	0.11	0.0874601	0.1392	0.0327	0.1196	0.0908	0.0634	0.14	0.03	0.13	0.11	0.1016	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.20933	NA	NA	0.122209	0.09192	NA	0.072	NA	5.636991
1088	3	160170373	160170373	C	T	intergenic	TRIM59,KPNA4	dist=2747;dist=42410	NA	NA	intronic	ENSG00000213186	NA	NA	NA	Score=649;Name=lod=580	NA	3q25.33	NA	Name=ELF1_(SC-631)	NA	NA	rs144973441	0.01	0.01	0.011	0.0109824	0.0298	0.001	0.0058	0.0015	0.0184	0.03	NA	0.01	0.002	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.515181	NA	NA	NA	NA	NA	0.058	NA	5.6368667
1088	11	119059404	119059404	G	A	exonic	PDZD3	NA	nonsynonymous SNV	PDZD3:NM_001168468:exon9:c.G1115A:p.R372Q,PDZD3:NM_024791:exon9:c.G1073A:p.R358Q	exonic	ENSG00000172367	NA	nonsynonymous SNV	ENSG00000172367:ENST00000392817:exon6:c.G1313A:p.R438Q,ENSG00000172367:ENST00000531114:exon7:c.G1313A:p.R438Q,ENSG00000172367:ENST00000322712:exon9:c.G1073A:p.R358Q,ENSG00000172367:ENST00000355547:exon9:c.G1115A:p.R372Q,ENSG00000172367:ENST00000525131:exon9:c.G1076A:p.R359Q	NA	NA	11q23.3	NA	NA	NA	NA	rs1815811	0.63	0.63	0.646	0.664936	0.5716	0.879	0.4251	0.6014	0.7965	0.56	0.86	0.47	0.6	0.581	0.86	0.73	T	0.002	B	0.0	B	0.536	N	1.000	P	-0.895	N	1.62	T	-1.006	T	0.000	T	0.039	-0.17	3.171	-1.83	-0.564	0.042	6.357	-0.170042	NA	0.67	0.543888	0.588636	NA	0.746	NA	5.6368454
1088	22	32587302	32587302	G	A	exonic	RFPL2	NA	synonymous SNV	RFPL2:NM_006605:exon2:c.C411T:p.F137F,RFPL2:NM_001159545:exon4:c.C324T:p.F108F,RFPL2:NM_001159546:exon4:c.C324T:p.F108F,RFPL2:NM_001098527:exon5:c.C594T:p.F198F	exonic	ENSG00000128253	NA	synonymous SNV	ENSG00000128253:ENST00000248980:exon2:c.C411T:p.F137F,ENSG00000128253:ENST00000248983:exon4:c.C324T:p.F108F,ENSG00000128253:ENST00000400236:exon5:c.C324T:p.F108F,ENSG00000128253:ENST00000400237:exon5:c.C594T:p.F198F	NA	NA	22q12.3	NA	NA	NA	NA	rs76923625	0.0023	0.0023	NA	0.00339457	0.008	NA	0.0014	NA	0.0082	0.01	NA	NA	NA	0.0087	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.436387	NA	0.15	0.013256	0.003177	NA	0.014	NA	5.6367106
1088	3	142048450	142048450	A	G	exonic	XRN1	NA	synonymous SNV	XRN1:NM_001042604:exon37:c.T4227C:p.Y1409Y,XRN1:NM_019001:exon37:c.T4227C:p.Y1409Y	exonic	ENSG00000114127	NA	synonymous SNV	ENSG00000114127:ENST00000264951:exon37:c.T4227C:p.Y1409Y,ENSG00000114127:ENST00000392981:exon37:c.T4230C:p.Y1410Y	NA	NA	3q23	NA	NA	NA	NA	rs115294670	0.01	0.01	0.006	0.00299521	0.0099	NA	0.0029	0.0015	0.001	0.01	NA	NA	0.002	0.0093	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.491086	NA	NA	0.011395	0.001816	NA	NA	NA	5.6360716
1088	9	138377280	138377280	G	A	exonic	PPP1R26	NA	synonymous SNV	PPP1R26:NM_014811:exon4:c.G924A:p.K308K	exonic	ENSG00000196422	NA	synonymous SNV	ENSG00000196422:ENST00000605660:exon1:c.G924A:p.K308K,ENSG00000196422:ENST00000401470:exon3:c.G924A:p.K308K,ENSG00000196422:ENST00000604351:exon3:c.G924A:p.K308K,ENSG00000196422:ENST00000356818:exon4:c.G924A:p.K308K,ENSG00000196422:ENST00000605286:exon4:c.G924A:p.K308K	NA	NA	9q34.3	NA	NA	NA	NA	rs116980218	0.0032	0.0032	0.003	0.00299521	0.0119	NA	NA	0.0008	0.002	0.01	NA	NA	NA	0.0074	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.202876	NA	NA	0.011401	0.000908	NA	0.014	NA	5.6359656
1088	17	26919344	26919344	T	C	exonic	SPAG5	NA	synonymous SNV	SPAG5:NM_006461:exon3:c.A918G:p.T306T	exonic	ENSG00000076382	NA	synonymous SNV	ENSG00000076382:ENST00000321765:exon3:c.A918G:p.T306T	NA	NA	17q11.2	NA	NA	NA	NA	rs113667723	0.0041	0.0041	0.003	0.00299521	0.0099	NA	0.0058	0.0008	NA	0.01	NA	0.01	NA	0.008	0.013	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.377113	NA	NA	0.012907	0.002497	NA	NA	NA	5.6358596
1088	6	32610689	32610689	C	G	intronic	HLA-DQA1	NA	NA	NA	UTR3	ENSG00000196735	ENST00000374949:c.*148C>G	NA	NA	NA	NA	6p21.32	NA	Name=Pol2,PU.1,Pol2-4H8,CTCF_(C-20)	Name=4	NA	rs9272843	NA	NA	0.154	0.170927	0.1899	0.1835	0.1614	0.1467	0.1779	NA	NA	NA	NA	0.341	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.135949	NA	NA	NA	NA	NA	0.174	NA	5.6357667
1088	1	159674933	159674933	C	T	intergenic	APCS,CRP	dist=116272;dist=7146	NA	NA	ncRNA_exonic	ENSG00000223603	NA	NA	NA	Score=410;Name=lod=62	Name=C-reactive protein	1q23.2	NA	NA	NA	NA	rs876537	0.39	0.39	0.373	0.354233	0.3648	0.5595	0.3934	0.171	0.3517	0.36	0.59	0.38	0.18	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.522536	1.522536	NA	NA	NA	NA	0.312	NA	5.6352
1088	15	91801907	91801907	T	G	intronic	SV2B	NA	NA	NA	intronic	ENSG00000185518	NA	NA	NA	NA	NA	15q26.1	NA	Name=CTCF,Max	Name=21	NA	rs1075840	0.39	0.39	0.423	0.409545	0.3648	0.1498	0.2493	0.8593	0.229	0.36	0.14	0.27	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.347837	NA	NA	NA	NA	NA	0.471	NA	5.6352
1088	18	43243802	43243802	G	A	exonic	SLC14A2	NA	synonymous SNV	SLC14A2:NM_007163:exon11:c.G1404A:p.S468S,SLC14A2:NM_001242692:exon12:c.G1404A:p.S468S	exonic	ENSG00000132874	NA	synonymous SNV	ENSG00000132874:ENST00000255226:exon11:c.G1404A:p.S468S,ENSG00000132874:ENST00000586448:exon12:c.G1404A:p.S468S	NA	NA	18q12.3	NA	NA	NA	NA	rs143263878	0.0046	0.0046	0.005	0.00798722	0.0149	NA	0.0101	0.0008	0.0174	0.01	NA	0.01	NA	0.0094	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.93294	NA	NA	0.007209	0.002043	NA	0.007	NA	5.6351576
1088	13	23898509	23898509	T	C	exonic	SGCG	NA	synonymous SNV	SGCG:NM_000231:exon8:c.T705C:p.L235L	exonic	ENSG00000102683	NA	synonymous SNV	ENSG00000102683:ENST00000218867:exon8:c.T705C:p.L235L,ENSG00000102683:ENST00000537476:exon9:c.T705C:p.L235L,ENSG00000102683:ENST00000545013:exon9:c.T705C:p.L235L	Score=403;Name=lod=58	NA	13q12.12	NA	NA	NA	NA	rs1800353	0.64	0.64	0.601	0.629792	0.6918	0.748	0.7493	0.3253	0.771	0.68	0.78	0.72	0.33	0.6744	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.448463	NA	NA	0.665349	0.402179	NA	0.638	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000078407.2;CLNDSDB=.;CLNDSDBID=.	5.6351176
1089	13	52763889	52763889	G	A	ncRNA_exonic	MRPS31P5	NA	NA	NA	ncRNA_exonic	ENSG00000217576,ENSG00000243406,ENSG00000272281	NA	NA	NA	Score=355;Name=lod=37	NA	13q14.3	NA	NA	NA	NA	rs57455825	0.05	0.05	0.043	0.0609026	0.0318	0.0536	0.062	0.093	0.0542	0.04	0.06	0.06	0.07	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.125521	NA	NA	NA	NA	NA	0.051	NA	5.6348666
1089	15	29060699	29060699	A	G	ncRNA_exonic	LOC646278	NA	NA	NA	ncRNA_exonic	ENSG00000261377	NA	NA	NA	Score=631;Name=lod=487	NA	15q13.1	NA	NA	NA	NA	rs3930183	0.06	0.06	0.047	0.0882588	0.0318	0.0278	0.0375	0.2247	0.0603	0.02	0.01	0.04	0.19	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.595528	1.595528	NA	NA	NA	NA	0.051	NA	5.6348666
1089	4	38830012	38830012	G	C	exonic	TLR6	NA	synonymous SNV	TLR6:NM_006068:exon2:c.C1083G:p.T361T	exonic	ENSG00000174130	NA	synonymous SNV	ENSG00000174130:ENST00000381950:exon1:c.C1083G:p.T361T,ENSG00000174130:ENST00000436693:exon2:c.C1083G:p.T361T	NA	NA	4p14	Score=894;Name=V$COUP_01	NA	NA	NA	rs3821985	0.4	0.4	0.429	0.444888	0.3141	0.3958	0.3112	0.6944	0.3875	0.32	0.33	0.3	0.69	0.3766	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.072834	NA	NA	0.341744	0.63238	NA	0.42	NA	5.6342226
1089	21	20230102	20230102	C	T	intergenic	TMPRSS15,LINC00320	dist=454132;dist=1884811	NA	NA	ncRNA_exonic	ENSG00000198618	NA	NA	NA	Score=374;Name=lod=44	NA	21q21.1	NA	Name=CTCF_(SC-5916)	NA	NA	rs2825212	0.29	0.29	0.216	0.276358	0.3658	0.3581	0.2334	0.0953	0.3753	0.38	0.36	0.24	0.1	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.324808	1.324808	NA	NA	NA	NA	0.21	NA	5.6342
1089	19	8367525	8367525	G	C	intronic	CD320	NA	NA	NA	intronic	ENSG00000167775	NA	NA	NA	NA	NA	19p13.2	NA	Name=Egr-1	Name=15	NA	rs2227288	0.14	0.14	0.139	0.132987	0.1203	0.0675	0.1383	0.2307	0.0777	0.12	0.08	0.15	0.22	0.1247	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.217573	NA	NA	0.120987	0.202678	NA	0.13	NA	5.634013
1089	15	88576185	88576185	G	C	exonic	NTRK3	NA	synonymous SNV	NTRK3:NM_001243101:exon13:c.C1464G:p.A488A,NTRK3:NM_001007156:exon14:c.C1488G:p.A496A,NTRK3:NM_001012338:exon14:c.C1488G:p.A496A,NTRK3:NM_002530:exon14:c.C1488G:p.A496A	exonic	ENSG00000140538	NA	synonymous SNV	ENSG00000140538:ENST00000557856:exon11:c.C1464G:p.A488A,ENSG00000140538:ENST00000558676:exon11:c.C1464G:p.A488A,ENSG00000140538:ENST00000357724:exon12:c.C1464G:p.A488A,ENSG00000140538:ENST00000540489:exon12:c.C1488G:p.A496A,ENSG00000140538:ENST00000542733:exon12:c.C1194G:p.A398A,ENSG00000140538:ENST00000317501:exon13:c.C1488G:p.A496A,ENSG00000140538:ENST00000355254:exon13:c.C1488G:p.A496A,ENSG00000140538:ENST00000360948:exon13:c.C1488G:p.A496A,ENSG00000140538:ENST00000394480:exon14:c.C1488G:p.A496A	NA	NA	15q25.3	NA	NA	Name=14	NA	rs2229910	0.32	0.32	0.307	0.35004	0.3171	0.2083	0.3746	0.4395	0.3916	0.31	0.2	0.4	0.42	0.361	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.819401	NA	NA	0.355083	0.404816	ID=COSM147967;OCCURENCE=1(stomach)	0.239	NA	5.6334836
1089	4	159791519	159791519	G	A	exonic	FNIP2	NA	synonymous SNV	FNIP2:NM_020840:exon14:c.G2847A:p.A949A	exonic	ENSG00000052795	NA	synonymous SNV	ENSG00000052795:ENST00000264433:exon14:c.G2847A:p.A949A,ENSG00000052795:ENST00000379346:exon14:c.G2916A:p.A972A	NA	NA	4q32.1	NA	NA	NA	NA	rs11946928	0.03	0.03	0.037	0.0551118	0.007	0.0308	0.013	0.1604	0.0174	0.01	0.01	0.01	0.12	0.0192	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.120624	NA	NA	0.007126	0.131643	NA	0.036	NA	5.6333406
1089	17	16691291	16691291	G	A	ncRNA_exonic	USP32P1	NA	NA	NA	ncRNA_exonic	ENSG00000188933	NA	NA	NA	Score=569;Name=lod=273	NA	17p11.2	NA	NA	NA	NA	rs141864685	0.02	0.02	0.008	0.0123802	0.0338	NA	0.0274	0.0015	0.0072	0.03	NA	0.02	0.002	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.618122	NA	NA	NA	NA	NA	NA	NA	5.6328666
1089	15	42264431	42264431	A	G	intronic	EHD4	NA	NA	NA	intronic	ENSG00000103966	NA	NA	NA	NA	NA	15q15.1	NA	Name=ZBTB7A_(SC-34508),Pol2-4H8,E2F6	Name=9	NA	rs1704413	0.16	0.16	0.109	0.206869	0.1223	0.1101	0.1412	0.329	0.2751	0.12	0.12	0.15	0.3	0.1529	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.566104	NA	NA	0.09239	0.245682	NA	0.029	NA	5.63241
1089	18	46468946	46468946	G	A	exonic	SMAD7	NA	nonsynonymous SNV	SMAD7:NM_001190823:exon1:c.C83T:p.S28F	intronic	ENSG00000101665	NA	NA	NA	NA	NA	18q21.1	NA	Name=JunD,GATA-2,c-Fos,c-Jun,TCF4	NA	NA	rs3764482	0.11	0.11	0.095	0.0878594	0.1978	0.0665	0.1297	0.0159	0.0644	0.2	0.05	0.15	0.03	0.1444	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.548901	1.548901	NA	0.192209	0.040172	NA	0.08	NA	5.6322577
1089	9	32425910	32425910	A	G	exonic	ACO1	NA	synonymous SNV	ACO1:NM_002197:exon11:c.A1263G:p.E421E	exonic	ENSG00000122729	NA	synonymous SNV	ENSG00000122729:ENST00000309951:exon11:c.A1263G:p.E421E,ENSG00000122729:ENST00000379923:exon12:c.A1263G:p.E421E,ENSG00000122729:ENST00000541043:exon12:c.A966G:p.E322E	Score=607;Name=lod=389	NA	9p21.1	NA	NA	NA	NA	rs3780473	0.37	0.37	0.354	0.353834	0.336	0.5516	0.3386	0.2632	0.3016	0.33	0.55	0.36	0.23	0.3445	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.709008	NA	NA	0.354419	0.273264	NA	0.29	NA	5.6317476
1089	19	58361549	58361549	A	G	intronic	ZNF587	NA	NA	NA	intronic	ENSG00000198466,ENSG00000268750,ENSG00000269343	NA	NA	NA	NA	NA	19q13.43	NA	Name=Pol2,BCL3,Pol2-4H8	Name=7	NA	rs58754895	0.46	0.46	0.439	0.42492	0.3688	0.4087	0.4813	0.6135	0.2045	0.37	0.47	0.48	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.279543	NA	NA	NA	NA	NA	0.319	NA	5.6312
1089	4	38829832	38829832	T	C	exonic	TLR6	NA	synonymous SNV	TLR6:NM_006068:exon2:c.A1263G:p.K421K	exonic	ENSG00000174130	NA	synonymous SNV	ENSG00000174130:ENST00000381950:exon1:c.A1263G:p.K421K,ENSG00000174130:ENST00000436693:exon2:c.A1263G:p.K421K	NA	NA	4p14	NA	NA	Name=4	NA	rs3775073	0.42	0.42	0.447	0.457468	0.3141	0.3958	0.3156	0.7398	0.3875	0.32	0.33	0.3	0.76	0.3793	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.732047	NA	NA	0.342093	0.660463	NA	0.435	NA	5.6311736
1089	9	116044998	116044998	A	G	exonic	PRPF4	NA	synonymous SNV	PRPF4:NM_001244926:exon4:c.A465G:p.K155K,PRPF4:NM_004697:exon4:c.A468G:p.K156K	exonic	ENSG00000136875	NA	synonymous SNV	ENSG00000136875:ENST00000374198:exon4:c.A468G:p.K156K,ENSG00000136875:ENST00000374199:exon4:c.A465G:p.K155K	Score=624;Name=lod=457	NA	9q32	NA	NA	NA	NA	rs11552582	0.38	0.38	0.384	0.414137	0.3231	0.4306	0.2104	0.4599	0.5736	0.33	0.44	0.24	0.5	0.3687	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.159599	NA	NA	0.343953	0.448933	NA	0.435	NA	5.6309136
1089	19	22783220	22783220	C	A	ncRNA_intronic	LOC440518	NA	NA	NA	ncRNA_intronic	ENSG00000269332	NA	NA	NA	Score=529;Name=lod=188	NA	19p12	NA	NA	NA	NA	rs9305001	0.09	0.09	0.08	0.0936502	0.0358	0.0516	0.1398	0.1778	0.0501	0.04	0.06	0.12	0.17	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.116478	NA	NA	NA	NA	NA	0.138	NA	5.6308666
1089	1	154832304	154832304	T	C	UTR5	KCNN3	NM_170782:c.-116A>G	NA	NA	UTR5	ENSG00000143603	ENST00000361147:c.-116A>G	NA	NA	NA	NA	1q21.3	NA	Name=POU2F2,MEF2A,Pol2,Oct-2,NFKB,BATF,TBP	Name=14	NA	rs4845397	0.73	0.73	0.694	0.717252	0.7028	0.9841	0.7939	0.407	0.8221	0.71	0.99	0.78	0.42	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.098795	NA	NA	NA	NA	NA	0.703	NA	5.6305334
1089	6	154771277	154771277	A	G	exonic	CNKSR3	NA	synonymous SNV	CNKSR3:NM_173515:exon2:c.T168C:p.I56I	exonic	ENSG00000153721	NA	synonymous SNV	ENSG00000153721:ENST00000607772:exon2:c.T168C:p.I56I	Score=534;Name=lod=198	NA	6q25.2	Score=817;Name=V$ER_Q6	NA	NA	NA	rs9322467	0.78	0.78	0.791	0.804113	0.666	0.9008	0.7579	0.8616	0.8016	0.67	0.92	0.74	0.82	0.7211	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.712496	1.712496	NA	0.649419	0.834317	NA	0.761	NA	5.6301476
1089	17	39593768	39593768	A	G	exonic	KRT38	NA	nonsynonymous SNV	KRT38:NM_006771:exon7:c.T1267C:p.S423P	exonic	ENSG00000171360	NA	nonsynonymous SNV	ENSG00000171360:ENST00000246646:exon7:c.T1267C:p.S423P	NA	NA	17q21.2	NA	NA	NA	NA	rs897416	0.92	0.92	0.929	0.933706	0.8837	0.999	0.9236	0.9387	0.9182	0.88	1	0.91	0.92	0.9134	1	0.55	T	0.0	B	0.0	B	0.103	N	1.000	P	0	N	-1.58	D	-1.006	T	0.000	T	0.053	-0.448	1.924	-0.938	-0.486	-0.227	3.354	-0.447651	NA	0.93	0.906163	0.925556	NA	0.906	NA	5.6300704
1089	12	6435571	6435571	A	G	intronic	PLEKHG6	NA	NA	NA	intronic	ENSG00000008323	NA	NA	NA	NA	Name=Obesity-related traits	12p13.31	NA	Name=CTCF_(C-20),CTCF,Rad21,SMC3_(ab9263)	Name=111	NA	rs10849441	0.37	0.37	0.386	0.308307	0.4901	0.2659	0.281	0.2375	0.2802	0.51	0.28	0.33	0.28	0.4124	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.194013	NA	NA	0.467558	0.259419	NA	0.362	NA	5.629942
1089	11	128840872	128840872	G	A	exonic	ARHGAP32	NA	synonymous SNV	ARHGAP32:NM_014715:exon13:c.C3147T:p.R1049R,ARHGAP32:NM_001142685:exon22:c.C4194T:p.R1398R	exonic	ENSG00000134909	NA	synonymous SNV	ENSG00000134909:ENST00000527272:exon12:c.C3147T:p.R1049R,ENSG00000134909:ENST00000392657:exon13:c.C3147T:p.R1049R,ENSG00000134909:ENST00000310343:exon22:c.C4194T:p.R1398R	NA	NA	11q24.3	NA	NA	NA	NA	rs61748829	0.01	0.01	0.006	0.00399361	0.0179	NA	NA	NA	0.002	0.02	NA	NA	NA	0.0099	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.179501	NA	NA	0.009891	0.002726	NA	NA	NA	5.6289756
1089	10	103542959	103542959	C	G	intronic	NPM3	NA	NA	NA	intronic	ENSG00000107833	NA	NA	NA	NA	NA	10q24.32	NA	Name=Egr-1	Name=6	NA	rs935445	0.19	0.19	0.183	0.250399	0.3718	0.129	0.3746	0.0295	0.4611	0.31	0.12	0.28	0.03	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.907627	NA	NA	NA	NA	NA	NA	NA	5.6282
1089	10	103542960	103542960	C	G	intronic	NPM3	NA	NA	NA	intronic	ENSG00000107833	NA	NA	NA	NA	NA	10q24.32	NA	Name=Egr-1	Name=6	NA	rs935444	0.19	0.19	0.175	0.250399	0.3718	0.129	0.3746	0.0295	0.4611	0.31	0.12	0.28	0.03	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.105373	NA	NA	NA	NA	NA	NA	NA	5.6282
1089	6	85996401	85996401	C	T	intergenic	TBX18,NT5E	dist=522447;dist=162901	NA	NA	ncRNA_exonic	ENSG00000217060	NA	NA	NA	Score=687;Name=lod=825	NA	6q14.3	NA	NA	Name=7	NA	rs313229	0.51	0.51	0.509	0.544728	0.3728	0.6498	0.4986	0.6097	0.5583	0.38	0.69	0.48	0.53	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.571174	NA	NA	NA	NA	NA	0.464	NA	5.6272
1089	2	218925419	218925419	A	T	ncRNA_exonic	CXCR2P1	NA	NA	NA	ncRNA_exonic	ENSG00000229754	NA	NA	NA	NA	NA	2q35	Score=841;Name=V$SRF_Q6	NA	NA	NA	rs3181379	0.01	0.01	0.008	0.00599042	0.0249	NA	0.0072	NA	NA	0.02	NA	0.01	NA	0.0147	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.915861	NA	NA	NA	NA	NA	NA	NA	5.6270666
1089	7	117865028	117865028	G	A	exonic	ANKRD7	NA	synonymous SNV	ANKRD7:NM_019644:exon1:c.G144A:p.K48K	exonic	ENSG00000106013	NA	synonymous SNV	ENSG00000106013:ENST00000265224:exon1:c.G144A:p.K48K,ENSG00000106013:ENST00000357099:exon1:c.G144A:p.K48K,ENSG00000106013:ENST00000486422:exon1:c.G144A:p.K48K	NA	NA	7q31.31	NA	NA	NA	NA	rs10487391	0.04	0.04	0.028	0.0315495	0.0139	0.0645	0.0346	0.0227	0.0256	0.01	0.07	0.05	0.03	0.0257	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.347243	NA	NA	NA	NA	NA	0.007	NA	5.6270666
1089	19	12089363	12089363	T	C	exonic	ZNF763	NA	synonymous SNV	ZNF763:NM_001012753:exon4:c.T633C:p.A211A	exonic	ENSG00000197054,ENSG00000267179	NA	synonymous SNV	ENSG00000197054:ENST00000545530:exon2:c.T258C:p.A86A,ENSG00000197054:ENST00000343949:exon4:c.T633C:p.A211A,ENSG00000197054:ENST00000358987:exon4:c.T624C:p.A208A,ENSG00000197054:ENST00000538752:exon4:c.T684C:p.A228A,ENSG00000267179:ENST00000590798:exon4:c.T684C:p.A228A	NA	NA	19p13.2	NA	NA	NA	NA	rs7253997	0.01	0.01	NA	0.019369	0.0229	0.006	0.0144	0.0257	0.0245	0.01	0.01	0.02	0.02	0.0168	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.219296	NA	NA	NA	NA	NA	NA	NA	5.6269666
1089	22	32795641	32795641	C	T	exonic	C22orf28	NA	synonymous SNV	C22orf28:NM_014306:exon6:c.G603A:p.Q201Q	exonic	ENSG00000100220	NA	synonymous SNV	ENSG00000100220:ENST00000216038:exon6:c.G603A:p.Q201Q	Score=621;Name=lod=444	NA	22q12.3	NA	NA	NA	NA	rs5749426	0.44	0.44	0.45	0.445687	0.3032	0.5179	0.3487	0.6392	0.3252	0.31	0.51	0.35	0.62	0.3881	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.811787	NA	NA	0.348605	0.610758	NA	0.457	NA	5.6267616
1089	19	579630	579630	G	A	exonic	BSG	NA	synonymous SNV	BSG:NM_198589:exon2:c.G198A:p.A66A,BSG:NM_001728:exon3:c.G546A:p.A182A	exonic	ENSG00000172270	NA	synonymous SNV	ENSG00000172270:ENST00000353555:exon2:c.G198A:p.A66A,ENSG00000172270:ENST00000573216:exon2:c.G174A:p.A58A,ENSG00000172270:ENST00000333511:exon3:c.G546A:p.A182A	NA	NA	19p13.3	NA	NA	NA	NA	rs61729580	0.0041	0.0041	0.003	0.00359425	0.0109	NA	0.0058	0.0015	0.001	0.01	NA	0.01	NA	0.0121	0.017	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.404345	NA	NA	0.017334	0.004773	NA	NA	NA	5.6263326
1089	1	55119466	55119466	C	T	exonic	MROH7	NA	synonymous SNV	MROH7:NM_001039464:exon3:c.C867T:p.S289S	exonic	ENSG00000184313,ENSG00000271723	NA	synonymous SNV	ENSG00000184313:ENST00000438846:exon1:c.C867T:p.S289S,ENSG00000184313:ENST00000413188:exon2:c.C867T:p.S289S,ENSG00000184313:ENST00000422659:exon2:c.C867T:p.S289S,ENSG00000184313:ENST00000339553:exon3:c.C867T:p.S289S,ENSG00000184313:ENST00000395690:exon3:c.C867T:p.S289S,ENSG00000271723:ENST00000414150:exon3:c.C867T:p.S289S,ENSG00000184313:ENST00000421030:exon3:c.C867T:p.S289S,ENSG00000271723:ENST00000425300:exon3:c.C867T:p.S289S,ENSG00000184313:ENST00000440047:exon3:c.C867T:p.S289S,ENSG00000271723:ENST00000606515:exon3:c.C867T:p.S289S	NA	NA	1p32.3	NA	NA	NA	NA	rs2304315	0.07	0.07	0.057	0.066893	0.0109	0.1032	0.0447	0.1354	0.0102	0.01	0.09	0.04	0.15	0.0273	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.021292	NA	NA	0.0032	0.102828	ID=COSM1343520,COSM1343521;OCCURENCE=1(large_intestine)	0.065	NA	5.6252666
1089	9	123156657	123156657	T	G	intronic	CDK5RAP2	NA	NA	NA	intronic	ENSG00000136861	NA	NA	NA	NA	NA	9q33.2	NA	Name=STAT3,TCF4,CTCF	Name=100	NA	rs10984901	0.34	0.34	0.298	0.33107	0.3748	0.4633	0.4251	0.0439	0.4714	0.39	0.48	0.38	0.08	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.109264	NA	NA	NA	NA	NA	0.326	NA	5.6252
1090	1	65614260	65614260	C	T	intronic	AK4	NA	NA	NA	intronic	ENSG00000162433	NA	NA	NA	NA	NA	1p31.3	NA	Name=TAF1,Pol2-4H8,Pol2	Name=102	NA	rs115225200	0.15	0.15	0.127	0.156749	0.0686	0.1012	0.3069	0.2375	0.089	0.07	0.1	0.29	0.23	0.2343	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.508283	1.508283	NA	0.072606	0.163007	NA	0.167	NA	5.624494
1090	19	50562852	50562852	G	A	ncRNA_intronic	FLJ26850	NA	NA	NA	ncRNA_exonic	ENSG00000269540	NA	NA	NA	NA	NA	19q13.33	NA	Name=KAP1	NA	NA	rs61743955	0.02	0.02	0.025	0.0131789	0.0427	NA	0.0259	NA	0.0051	0.05	NA	0.04	NA	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.805115	NA	NA	NA	NA	NA	0.087	NA	5.6239666
1090	1	152057794	152057794	G	C	exonic	TCHHL1	NA	synonymous SNV	TCHHL1:NM_001008536:exon3:c.C2364G:p.P788P	exonic	ENSG00000182898	NA	synonymous SNV	ENSG00000182898:ENST00000368806:exon3:c.C2364G:p.P788P	NA	NA	1q21.3	NA	NA	NA	NA	rs61750909	0.01	0.01	0.008	0.0061901	0.0149	NA	0.0173	NA	0.0041	0.01	NA	0.02	NA	0.0119	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.308145	NA	NA	0.016047	0.002497	NA	NA	NA	5.6238196
1090	2	96780716	96780716	T	G	exonic	ADRA2B	NA	synonymous SNV	ADRA2B:NM_000682:exon1:c.A1173C:p.G391G	exonic	ENSG00000222040	NA	synonymous SNV	ENSG00000222040:ENST00000409345:exon1:c.A1173C:p.G391G	Score=535;Name=lod=199	NA	2q11.1	Score=937;Name=V$GATA2_01	NA	NA	NA	rs2229169	0.67	0.67	0.701	0.705272	0.6819	0.5962	0.6571	0.7685	0.7904	0.67	0.58	0.69	0.78	0.6785	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.890758	NA	NA	0.682591	0.748167	NA	0.681	NA	5.6236756
1090	5	96117579	96117579	G	A	intronic	ERAP1	NA	NA	NA	intronic	ENSG00000164307	NA	NA	NA	NA	NA	5q15	NA	Name=FOXA1_(C-20),FOSL2,SP1,FOXA2_(SC-6554),FOXA1_(SC-101058)	Name=11	NA	rs72773923	0.07	0.07	0.059	0.0607029	0.1392	NA	0.1196	0.0053	0.0757	0.13	NA	0.13	0.01	0.1014	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.035404	NA	NA	0.136047	0.023377	NA	0.152	NA	5.623353
1090	5	176308113	176308113	G	A	exonic	HK3	NA	synonymous SNV	HK3:NM_002115:exon19:c.C2733T:p.T911T	exonic	ENSG00000160883	NA	synonymous SNV	ENSG00000160883:ENST00000292432:exon19:c.C2733T:p.T911T	NA	NA	5q35.2	NA	NA	NA	NA	rs61745231	0.01	0.01	0.011	0.0159744	0.0129	0.001	0.013	0.0098	0.045	0.02	NA	0.01	0.01	0.0171	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.883991	NA	NA	0.013837	0.008171	NA	0.007	NA	5.6228296
1090	4	185686032	185686032	C	T	exonic	ACSL1	NA	synonymous SNV	ACSL1:NM_001995:exon15:c.G1407A:p.L469L	exonic	ENSG00000151726	NA	synonymous SNV	ENSG00000151726:ENST00000503407:exon3:c.G225A:p.L75L,ENSG00000151726:ENST00000454703:exon14:c.G894A:p.L298L,ENSG00000151726:ENST00000507295:exon14:c.G1305A:p.L435L,ENSG00000151726:ENST00000281455:exon15:c.G1407A:p.L469L,ENSG00000151726:ENST00000504342:exon15:c.G1407A:p.L469L,ENSG00000151726:ENST00000513317:exon15:c.G1407A:p.L469L,ENSG00000151726:ENST00000515030:exon15:c.G1407A:p.L469L,ENSG00000151726:ENST00000437665:exon16:c.G894A:p.L298L	Score=399;Name=lod=56	NA	4q35.1	NA	NA	Name=5	NA	rs2292898	0.81	0.81	0.807	0.83147	0.6511	0.9306	0.8242	0.9546	0.7536	0.64	0.93	0.77	0.96	0.7348	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.322979	NA	NA	0.65814	0.916251	NA	0.812	NA	5.6226266
1090	7	38948595	38948595	C	T	intronic	VPS41	NA	NA	NA	intronic	ENSG00000006715	NA	NA	NA	NA	NA	7p14.1	NA	Name=EBF1_(C-8),Pol2,NFKB,TBP,ELK4,Pol2-4H8,HA-E2F1	Name=3	NA	rs2072247	0.21	0.21	0.221	0.154752	0.3777	0.1319	0.2147	0.0234	0.0838	0.4	0.1	0.24	0.02	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.03261	NA	NA	NA	NA	NA	0.094	NA	5.6223
1090	19	55670825	55670825	T	C	intronic	DNAAF3	NA	NA	NA	ncRNA_exonic	ENSG00000267577	NA	NA	NA	NA	NA	19q13.42	NA	Name=AP-2gamma,BAF155	Name=56	NA	rs28377509	0.41	0.41	0.414	0.469249	0.1909	0.4385	0.4395	0.73	0.456	0.19	0.45	0.36	0.73	0.3244	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.437169	NA	NA	0.195793	0.61461	NA	0.442	NA	5.6222403
1090	7	35293193	35293193	A	G	exonic	TBX20	NA	synonymous SNV	TBX20:NM_001077653:exon1:c.T39C:p.S13S,TBX20:NM_001166220:exon1:c.T39C:p.S13S	exonic	ENSG00000164532	NA	synonymous SNV	ENSG00000164532:ENST00000408931:exon1:c.T39C:p.S13S	Score=661;Name=lod=647	NA	7p14.2	NA	NA	Name=6	NA	rs336283	0.69	0.69	0.686	0.69389	0.6789	0.5893	0.6816	0.8797	0.5746	0.69	0.56	0.7	0.85	0.6767	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.944065	1.944065	NA	0.689186	0.857694	NA	0.681	NA	5.6218806
1090	20	12989901	12989901	T	C	UTR5	SPTLC3	NM_018327:c.-15T>C	NA	NA	UTR5	ENSG00000172296	ENST00000434210:c.-15T>C,ENST00000399002:c.-15T>C,ENST00000378194:c.-15T>C	NA	NA	NA	NA	20p12.1	NA	Name=CTCF_(SC-5916),GATA3_(SC-268),Rad21,CTCF	Name=83	NA	rs3761896	0.21	0.21	0.188	0.217452	0.2197	0.254	0.2522	0.028	0.409	0.23	0.33	0.21	0.03	0.2521	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.743425	1.743425	NA	0.240233	0.0665	NA	0.152	NA	5.6213004
1090	10	94966732	94966732	A	C	intergenic	CYP26A1,MYOF	dist=129091;dist=99454	NA	NA	ncRNA_exonic	ENSG00000237417	NA	NA	NA	Score=647;Name=lod=566	NA	10q23.33	NA	Name=CTCF	NA	NA	rs7895627	0.54	0.54	0.34	0.537939	0.3787	0.9554	0.549	0.2821	0.6094	0.4	0.95	0.52	0.29	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.346314	NA	NA	NA	NA	NA	0.21	NA	5.6213
1090	9	116764283	116764283	C	T	exonic	ZNF618	NA	synonymous SNV	ZNF618:NM_133374:exon4:c.C345T:p.Y115Y	exonic	ENSG00000157657	NA	synonymous SNV	ENSG00000157657:ENST00000288466:exon4:c.C345T:p.Y115Y,ENSG00000157657:ENST00000374124:exon4:c.C345T:p.Y115Y,ENSG00000157657:ENST00000452710:exon4:c.C345T:p.Y115Y,ENSG00000157657:ENST00000374126:exon5:c.C441T:p.Y147Y	Score=615;Name=lod=423	NA	9q32	NA	NA	NA	NA	rs4978561	0.37	0.37	0.358	0.330272	0.3489	0.6022	0.2882	0.1293	0.3323	0.37	0.63	0.29	0.13	0.3641	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.833068	NA	NA	0.33245	0.153672	NA	0.333	NA	5.6212166
1090	11	33097765	33097765	G	T	ncRNA_exonic	LINC00294	NA	NA	NA	ncRNA_exonic	ENSG00000213713	NA	NA	NA	Score=568;Name=lod=272	NA	11p13	NA	NA	NA	NA	rs116510397	NA	NA	NA	0.014976	0.0457	NA	0.0274	0.0015	0.0082	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.164607	NA	NA	NA	NA	NA	NA	NA	5.6209666
1090	6	132594152	132594152	G	A	intergenic	LOC100507254,MOXD1	dist=103638;dist=23042	NA	NA	ncRNA_exonic	ENSG00000223912	NA	NA	NA	Score=766;Name=lod=1735	NA	6q23.2	NA	NA	Name=6	NA	rs6933036	0.57	0.57	0.599	0.614018	0.3797	0.6577	0.4193	0.8351	0.6493	0.38	0.66	0.41	0.87	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.483892	NA	NA	NA	NA	NA	0.674	NA	5.6203
1090	22	25145453	25145453	C	T	exonic	PIWIL3	NA	nonsynonymous SNV	PIWIL3:NM_001008496:exon11:c.G1252A:p.V418M,PIWIL3:NM_001255975:exon11:c.G1252A:p.V418M	exonic	ENSG00000184571	NA	nonsynonymous SNV	ENSG00000184571:ENST00000332271:exon11:c.G1252A:p.V418M,ENSG00000184571:ENST00000527701:exon12:c.G925A:p.V309M,ENSG00000184571:ENST00000533313:exon12:c.G925A:p.V309M	NA	NA	22q11.23	NA	NA	NA	NA	rs1892723	0.93	0.93	0.932	0.926518	0.8996	0.9405	0.8919	0.9962	0.8701	0.89	0.94	0.9	0.99	0.8986	0.99	1	T	0.006	B	0.003	B	0.000	N	1.000	P	-3.165	N	3.3	T	-1.023	T	0.000	T	0.19	-2.086	0.006	1.74	-0.034	1.783	5.964	-2.086393	NA	1	0.915	0.978212	NA	0.971	NA	5.6201334
1090	7	12725466	12725466	C	A	upstream	ARL4A	NA	NA	NA	ncRNA_exonic	ENSG00000271253	NA	NA	NA	Score=420;Name=lod=68	NA	7p21.3	NA	Name=CTCF	NA	NA	rs3757444	0.43	0.43	0.418	0.452676	0.5467	0.2133	0.3458	0.4947	0.6217	0.56	0.21	0.4	0.51	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.820834	NA	NA	NA	NA	NA	0.464	NA	5.6199666
1090	6	30888169	30888169	G	A	exonic	VARS2	NA	synonymous SNV	VARS2:NM_001167733:exon13:c.G933A:p.L311L,VARS2:NM_001167734:exon14:c.G1443A:p.L481L,VARS2:NM_020442:exon14:c.G1353A:p.L451L	exonic	ENSG00000137411	NA	synonymous SNV	ENSG00000137411:ENST00000321897:exon13:c.G1353A:p.L451L,ENSG00000137411:ENST00000542001:exon13:c.G933A:p.L311L,ENSG00000137411:ENST00000416670:exon14:c.G1353A:p.L451L,ENSG00000137411:ENST00000541562:exon14:c.G1443A:p.L481L	Score=423;Name=lod=70	NA	6p21.33	NA	NA	NA	NA	rs2517468	0.24	0.24	0.234	0.222244	0.3559	0.247	0.2075	0.0983	0.2372	0.35	0.28	0.21	0.06	0.3197	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.075341	NA	NA	0.371628	0.139582	ID=COSM451180;OCCURENCE=1(breast)	0.283	NA	5.6194386
1090	4	123187869	123187869	C	T	intronic	KIAA1109	NA	NA	NA	intronic	ENSG00000138688	NA	NA	NA	NA	NA	4q27	NA	Name=FOSL2	Name=7	NA	rs7683061	0.36	0.36	0.337	0.393371	0.3807	0.3571	0.3718	0.3359	0.5368	0.38	0.34	0.37	0.32	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.747088	NA	NA	NA	NA	NA	0.362	NA	5.6193
1090	12	15090762	15090762	G	C	intronic	ERP27	NA	NA	NA	intronic	ENSG00000139055	NA	NA	NA	NA	NA	12p12.3	NA	Name=CTCF,Rad21,SMC3_(ab9263),CTCF_(C-20),CTCF_(SC-5916)	Name=27	NA	rs3748296	0.28	0.28	0.271	0.285743	0.3807	0.125	0.3876	0.2776	0.2924	0.36	0.11	0.39	0.29	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.960335	NA	NA	NA	NA	NA	0.37	NA	5.6193
1090	2	186672897	186672897	A	G	exonic	FSIP2	NA	synonymous SNV	FSIP2:NM_173651:exon17:c.A19131G:p.L6377L	exonic	ENSG00000188738	NA	synonymous SNV	ENSG00000188738:ENST00000343098:exon17:c.A19131G:p.L6377L,ENSG00000188738:ENST00000424728:exon17:c.A18864G:p.L6288L	Score=385;Name=lod=49	NA	2q32.1	NA	NA	NA	NA	rs4666690	0.34	0.34	0.32	0.326877	0.3658	0.4077	0.3559	0.2451	0.2935	0.37	0.41	0.34	0.23	0.3275	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.646004	NA	NA	0.354105	0.241704	NA	0.355	NA	5.6192616
1090	2	185802184	185802184	C	A	exonic	ZNF804A	NA	synonymous SNV	ZNF804A:NM_194250:exon4:c.C2061A:p.I687I	exonic	ENSG00000170396	NA	synonymous SNV	ENSG00000170396:ENST00000302277:exon4:c.C2061A:p.I687I	NA	NA	2q32.1	NA	NA	NA	NA	rs61739287	0.01	0.01	0.002	0.00658946	0.0179	NA	0.0043	NA	0.0123	0.02	NA	0.01	NA	0.012	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.294311	NA	NA	0.017591	0.004316	NA	NA	NA	5.6191756
1090	19	1051214	1051214	A	G	exonic	ABCA7	NA	synonymous SNV	ABCA7:NM_019112:exon20:c.A2745G:p.V915V	exonic	ENSG00000064687	NA	synonymous SNV	ENSG00000064687:ENST00000435683:exon14:c.A2331G:p.V777V,ENSG00000064687:ENST00000433129:exon19:c.A2745G:p.V915V,ENSG00000064687:ENST00000263094:exon20:c.A2745G:p.V915V	NA	NA	19p13.3	NA	Name=TAF1	NA	NA	rs3752240	0.31	0.31	0.298	0.289137	0.3509	0.1101	0.4107	0.3676	0.2178	0.35	0.13	0.38	0.39	0.3361	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.936057	NA	NA	0.360658	0.374886	NA	0.399	NA	5.6190086
1090	19	7764741	7764741	G	A	intronic	FCER2	NA	NA	NA	UTR5	ENSG00000104921	ENST00000593418:c.-95C>T	NA	NA	NA	NA	19p13.2	NA	Name=CCNT2,ZNF263,GATA-1	Name=8	NA	rs2287867	0.54	0.54	0.51	0.527356	0.5477	0.6498	0.5245	0.3525	0.6186	0.56	0.65	0.51	0.39	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.82625	NA	NA	NA	NA	NA	0.486	NA	5.6189667
1090	18	44561177	44561177	A	G	exonic	TCEB3B	NA	synonymous SNV	TCEB3B:NM_016427:exon1:c.T459C:p.A153A	exonic	ENSG00000206181	NA	synonymous SNV	ENSG00000206181:ENST00000332567:exon1:c.T459C:p.A153A	NA	NA	18q21.1	NA	NA	NA	NA	rs61743594	0.01	0.01	0.004	0.00658946	0.0229	NA	0.0101	0.0008	0.002	0.02	NA	0.01	0.002	0.0105	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.008483	NA	NA	0.014884	0.004085	NA	0.029	NA	5.6183826
1090	3	3182295	3182295	G	T	exonic	TRNT1	NA	synonymous SNV	TRNT1:NM_182916:exon4:c.G444T:p.A148A	exonic	ENSG00000072756	NA	synonymous SNV	ENSG00000072756:ENST00000251607:exon4:c.G444T:p.A148A,ENSG00000072756:ENST00000280591:exon4:c.G444T:p.A148A,ENSG00000072756:ENST00000434583:exon4:c.G444T:p.A148A	NA	NA	3p26.2	NA	NA	NA	NA	rs41399044	0.04	0.04	0.056	0.0445288	0.0189	0.004	0.0159	0.1415	0.002	0.02	0.0035	0.02	0.15	0.0178	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.140013	NA	NA	0.011977	0.1069	NA	0.051	NA	5.6179896
1090	19	7764772	7764772	T	C	intronic	FCER2	NA	NA	NA	UTR5	ENSG00000104921	ENST00000593418:c.-126A>G	NA	NA	NA	NA	19p13.2	NA	Name=GATA-1,ZEB1_(SC-25388),CCNT2,ZNF263	Name=8	NA	rs2287868	0.56	0.56	0.534	0.553514	0.5487	0.6498	0.5303	0.4478	0.6186	0.56	0.65	0.52	0.49	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.790534	NA	NA	NA	NA	NA	0.514	NA	5.6179667
1090	19	39575987	39575987	G	A	exonic	PAPL	NA	synonymous SNV	PAPL:NM_001004318:exon2:c.G78A:p.G26G	exonic	ENSG00000183760	NA	synonymous SNV	ENSG00000183760:ENST00000594229:exon1:c.G78A:p.G26G,ENSG00000183760:ENST00000331256:exon2:c.G78A:p.G26G,ENSG00000183760:ENST00000601575:exon2:c.G78A:p.G26G	NA	NA	19q13.2	NA	NA	NA	NA	rs544041	0.11	0.11	0.14	0.137979	0.004	NA	0.0447	0.4962	NA	0.004	NA	0.06	0.43	0.042	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.07374	NA	NA	0.003372	0.42079	NA	0.21	NA	5.6172946
1090	8	128428795	128428795	G	A	exonic	POU5F1B	NA	synonymous SNV	POU5F1B:NM_001159542:exon1:c.G684A:p.Q228Q	exonic	ENSG00000212993	NA	synonymous SNV	ENSG00000212993:ENST00000391675:exon1:c.G684A:p.Q228Q,ENSG00000212993:ENST00000465342:exon2:c.G684A:p.Q228Q	Score=668;Name=lod=691	NA	8q24.21	NA	NA	NA	NA	rs6998254	0.52	0.52	0.506	0.509385	0.5239	0.5982	0.6124	0.3283	0.5746	0.52	0.62	0.59	0.35	0.5256	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.064434	NA	NA	NA	NA	NA	0.551	NA	5.6171666
1090	11	9116358	9116358	G	A	ncRNA_exonic	KRT8P41	NA	NA	NA	ncRNA_exonic	ENSG00000213538	NA	NA	NA	Score=703;Name=lod=956	NA	11p15.4	NA	NA	NA	NA	rs11042176	0.02	0.02	0.025	0.014377	0.0497	NA	0.0115	0.0015	0.0123	0.06	NA	0.01	NA	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.362627	NA	NA	NA	NA	NA	0.022	NA	5.6169666
1090	3	167051726	167051726	A	G	exonic	ZBBX	NA	synonymous SNV	ZBBX:NM_001199201:exon10:c.T576C:p.F192F,ZBBX:NM_001199202:exon10:c.T489C:p.F163F,ZBBX:NM_024687:exon10:c.T576C:p.F192F	exonic	ENSG00000169064	NA	synonymous SNV	ENSG00000169064:ENST00000307529:exon7:c.T576C:p.F192F,ENSG00000169064:ENST00000392767:exon7:c.T576C:p.F192F,ENSG00000169064:ENST00000455345:exon9:c.T576C:p.F192F,ENSG00000169064:ENST00000392764:exon10:c.T489C:p.F163F,ENSG00000169064:ENST00000392766:exon10:c.T576C:p.F192F	Score=289;Name=lod=20	NA	3q26.1	NA	NA	NA	NA	rs10936530	0.46	0.46	0.413	0.460463	0.341	0.6637	0.4395	0.4584	0.3916	0.34	0.67	0.4	0.43	0.3812	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.817104	NA	NA	0.327684	0.427019	NA	0.457	NA	5.6167826
1090	21	45550587	45550587	T	G	exonic	PWP2	NA	synonymous SNV	PWP2:NM_005049:exon21:c.T2694G:p.S898S	exonic	ENSG00000241945	NA	synonymous SNV	ENSG00000241945:ENST00000291576:exon21:c.T2694G:p.S898S	NA	NA	21q22.3	NA	NA	NA	NA	rs141972655	0.01	0.01	0.007	0.00559105	0.0219	NA	0.0072	NA	0.001	0.02	NA	0.01	NA	0.0116	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.069527	NA	NA	0.016395	0.00227	NA	NA	NA	5.6167716
1090	6	18161563	18161563	G	A	exonic	KDM1B	NA	synonymous SNV	KDM1B:NM_153042:exon4:c.G93A:p.K31K	exonic	ENSG00000165097	NA	synonymous SNV	ENSG00000165097:ENST00000297792:exon4:c.G93A:p.K31K,ENSG00000165097:ENST00000388870:exon4:c.G93A:p.K31K,ENSG00000165097:ENST00000397244:exon4:c.G93A:p.K31K	Score=457;Name=lod=96	NA	6p22.3	NA	NA	NA	NA	rs4716224	0.34	0.34	0.326	0.313498	0.3419	0.5258	0.3501	0.146	0.2658	0.35	0.51	0.33	0.14	0.3491	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.162378	NA	NA	0.35907	0.195188	NA	0.297	NA	5.6165966
1090	12	53454552	53454552	C	T	exonic	TENC1	NA	synonymous SNV	TENC1:NM_015319:exon20:c.C2892T:p.T964T,TENC1:NM_170754:exon20:c.C2862T:p.T954T,TENC1:NM_198316:exon20:c.C2490T:p.T830T	exonic	ENSG00000111077	NA	synonymous SNV	ENSG00000111077:ENST00000314250:exon20:c.C2862T:p.T954T,ENSG00000111077:ENST00000314276:exon20:c.C2892T:p.T964T,ENSG00000111077:ENST00000379902:exon20:c.C2490T:p.T830T,ENSG00000111077:ENST00000546602:exon20:c.C2571T:p.T857T,ENSG00000111077:ENST00000552570:exon20:c.C2862T:p.T954T,ENSG00000111077:ENST00000451358:exon21:c.C2832T:p.T944T,ENSG00000111077:ENST00000549700:exon21:c.C2667T:p.T889T	NA	NA	12q13.13	NA	NA	NA	NA	rs118159776	0.01	0.01	0.01	0.00559105	0.0209	NA	0.0058	0.0008	0.002	0.03	NA	0.01	NA	0.0117	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.647607	NA	NA	0.017558	0.004085	NA	0.007	NA	5.6165086
1090	19	14499614	14499614	G	C	exonic	CD97	NA	synonymous SNV	CD97:NM_001025160:exon3:c.G174C:p.P58P,CD97:NM_001784:exon3:c.G174C:p.P58P,CD97:NM_078481:exon3:c.G174C:p.P58P	exonic	ENSG00000123146	NA	synonymous SNV	ENSG00000123146:ENST00000586517:exon2:c.G123C:p.P41P,ENSG00000123146:ENST00000242786:exon3:c.G174C:p.P58P,ENSG00000123146:ENST00000357355:exon3:c.G174C:p.P58P,ENSG00000123146:ENST00000358600:exon3:c.G174C:p.P58P,ENSG00000123146:ENST00000587606:exon3:c.G174C:p.P58P,ENSG00000123146:ENST00000591080:exon3:c.G174C:p.P58P,ENSG00000123146:ENST00000592261:exon3:c.G174C:p.P58P	NA	NA	19p13.12	NA	NA	NA	NA	rs150665764	0.04	0.04	0.03	0.0393371	0.0258	0.0188	0.1023	0.0416	0.0266	0.02	0.02	0.09	0.05	0.0244	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.145127	NA	NA	NA	NA	NA	NA	NA	5.6164666
1090	3	129810158	129810158	C	T	exonic	ALG1L2	NA	synonymous SNV	ALG1L2:NM_001136152:exon2:c.C75T:p.D25D	ncRNA_exonic	ENSG00000251287	NA	NA	NA	Score=477;Name=lod=116	NA	3q22.1	NA	NA	NA	NA	rs6803922	0.19	0.19	0.164	0.184505	0.3042	0.005	0.1758	0.239	0.1789	0.31	0.0017	0.19	0.21	0.2463	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.110505	NA	NA	NA	NA	NA	0.217	NA	5.6161666
1090	1	53544439	53544439	G	A	exonic	PODN	NA	synonymous SNV	PODN:NM_001199082:exon4:c.G975A:p.P325P,PODN:NM_153703:exon8:c.G1401A:p.P467P,PODN:NM_001199081:exon9:c.G1344A:p.P448P,PODN:NM_001199080:exon10:c.G1344A:p.P448P	exonic	ENSG00000174348	NA	synonymous SNV	ENSG00000174348:ENST00000395871:exon4:c.G975A:p.P325P,ENSG00000174348:ENST00000312553:exon8:c.G1401A:p.P467P,ENSG00000174348:ENST00000371500:exon10:c.G1344A:p.P448P	Score=612;Name=lod=410	NA	1p32.3	Score=885;Name=V$AREB6_03	NA	NA	NA	rs1288388	0.46	0.46	0.438	0.410543	0.7326	0.2937	0.4813	0.1528	0.498	0.74	0.28	0.54	0.18	0.59	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.026139	NA	NA	0.728023	0.264412	NA	0.514	NA	5.6160436
1090	6	29975834	29975834	C	G	ncRNA_intronic	HLA-J,ZNRD1-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000204622,ENSG00000204623	NA	NA	NA	NA	NA	6p22.1	NA	Name=USF-1	NA	NA	rs9261109	0.05	0.05	0.05	0.0417332	0.0507	0.0377	0.0403	0.0499	0.0266	0.05	0.04	0.04	0.05	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.4189	NA	NA	NA	NA	NA	0.029	NA	5.6159666
1090	9	14859296	14859296	G	A	exonic	FREM1	NA	synonymous SNV	FREM1:NM_144966:exon5:c.C516T:p.T172T	exonic	ENSG00000164946	NA	synonymous SNV	ENSG00000164946:ENST00000380880:exon4:c.C516T:p.T172T,ENSG00000164946:ENST00000380875:exon5:c.C516T:p.T172T,ENSG00000164946:ENST00000380881:exon5:c.C516T:p.T172T,ENSG00000164946:ENST00000422223:exon5:c.C516T:p.T172T	NA	NA	9p22.3	NA	NA	NA	NA	rs41265310	0.01	0.01	0.007	0.0121805	0.0179	NA	0.0058	NA	0.0399	0.02	NA	0.01	NA	0.0178	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.364611	1.364611	NA	0.015591	0.004644	NA	0.08	NA	5.6153756
1090	11	95580926	95580926	G	A	exonic	MTMR2	NA	synonymous SNV	MTMR2:NM_016156:exon10:c.C1131T:p.T377T,MTMR2:NM_201281:exon11:c.C915T:p.T305T,MTMR2:NM_201278:exon12:c.C915T:p.T305T,MTMR2:NM_001243571:exon13:c.C915T:p.T305T	exonic	ENSG00000087053	NA	synonymous SNV	ENSG00000087053:ENST00000346299:exon10:c.C1131T:p.T377T,ENSG00000087053:ENST00000352297:exon11:c.C915T:p.T305T,ENSG00000087053:ENST00000444541:exon11:c.C915T:p.T305T,ENSG00000087053:ENST00000393223:exon12:c.C915T:p.T305T,ENSG00000087053:ENST00000409459:exon12:c.C915T:p.T305T	Score=605;Name=lod=383	NA	11q21	NA	NA	NA	NA	rs566204	0.27	0.27	0.278	0.209265	0.3708	0.253	0.2378	0.0923	0.136	0.37	0.28	0.28	0.09	0.298	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.935514	NA	NA	0.38262	0.132894	NA	0.246	NA	5.6152466
1091	1	17087365	17087365	C	G	exonic	MST1L	NA	synonymous SNV	MST1L:NM_001271733:exon3:c.G219C:p.A73A	ncRNA_exonic	ENSG00000186715	NA	NA	NA	Score=563;Name=lod=259	NA	1p36.13	NA	NA	NA	NA	rs2446556	NA	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5517	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.138609	NA	NA	NA	NA	NA	NA	NA	5.6149666
1091	3	129810128	129810128	G	A	exonic	ALG1L2	NA	synonymous SNV	ALG1L2:NM_001136152:exon2:c.G45A:p.P15P	ncRNA_exonic	ENSG00000251287	NA	NA	NA	Score=477;Name=lod=116	NA	3q22.1	NA	NA	NA	NA	rs6804080	0.19	0.19	0.18	0.189497	0.3032	0.004	0.1758	0.2595	0.1789	0.31	0.0017	0.19	0.23	0.2487	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.194168	NA	NA	NA	NA	NA	0.21	NA	5.6147666
1091	17	38546274	38546274	A	C	exonic	TOP2A	NA	synonymous SNV	TOP2A:NM_001067:exon34:c.T4410G:p.T1470T	exonic	ENSG00000131747	NA	synonymous SNV	ENSG00000131747:ENST00000423485:exon34:c.T4410G:p.T1470T	NA	NA	17q21.2	NA	NA	NA	NA	rs17680289	0.01	0.01	0.007	0.00678914	0.0209	NA	0.0101	0.0015	0.0041	0.02	NA	0.01	0.0041	0.0116	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.87145	NA	NA	0.019762	0.003412	NA	NA	NA	5.6144046
1091	1	74575182	74575182	C	T	exonic	LRRIQ3	NA	nonsynonymous SNV	LRRIQ3:NM_001105659:exon5:c.G763A:p.A255T	exonic	ENSG00000162620	NA	nonsynonymous SNV	ENSG00000162620:ENST00000370909:exon4:c.G439A:p.A147T,ENSG00000162620:ENST00000395089:exon4:c.G763A:p.A255T,ENSG00000162620:ENST00000354431:exon5:c.G763A:p.A255T,ENSG00000162620:ENST00000415760:exon5:c.G763A:p.A255T	NA	NA	1p31.1	NA	NA	NA	NA	rs1340472	0.84	0.84	0.808	0.804912	0.9085	0.9573	0.8876	0.5053	0.8875	0.91	0.98	0.89	0.54	0.8853	0.98	1	T	0.0	B	0.0	B	.	.	1.000	P	-1.61	N	3.23	T	-0.974	T	0.004	T	0.015	-1.38	0.025	-1.36	-0.586	-1.765	2.849	-1.380176	NA	0.2	0.925136	0.590223	NA	0.442	NA	5.6143974
1091	3	132120189	132120189	T	C	intergenic	ACPP,DNAJC13	dist=33043;dist=16364	NA	NA	ncRNA_exonic	ENSG00000213264	NA	NA	NA	Score=698;Name=lod=913	NA	3q22.1	NA	Name=EBF1_(C-8)	NA	NA	rs6806003	0.56	0.56	0.546	0.601438	0.3867	0.5298	0.536	0.9123	0.5225	0.41	0.47	0.54	0.9	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.198579	NA	NA	NA	NA	NA	0.601	NA	5.6133
1091	19	57828896	57828896	C	T	intergenic	ZNF460,ZNF543	dist=23460;dist=2969	NA	NA	ncRNA_exonic	ENSG00000268723	NA	NA	NA	Score=688;Name=lod=832	NA	19q13.43	NA	NA	Name=8	NA	rs11084495	0.43	0.43	0.392	0.413339	0.3867	0.4058	0.4784	0.4622	0.3364	0.39	0.45	0.46	0.44	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.251699	NA	NA	NA	NA	NA	0.391	NA	5.6133
1091	3	49742584	49742584	G	A	exonic	RNF123	NA	synonymous SNV	RNF123:NM_022064:exon23:c.G2127A:p.T709T	exonic	ENSG00000164068	NA	synonymous SNV	ENSG00000164068:ENST00000432042:exon20:c.G1689A:p.T563T,ENSG00000164068:ENST00000327697:exon23:c.G2127A:p.T709T,ENSG00000164068:ENST00000457726:exon23:c.G2127A:p.T709T	NA	NA	3p21.31	NA	NA	NA	NA	rs34539806	0.01	0.01	0.005	0.00439297	0.0149	NA	0.0014	0.0008	0.0051	0.02	NA	0.01	NA	0.0227	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.717164	NA	NA	0.016167	0.002736	NA	NA	NA	5.6128996
1091	3	101231895	101231895	A	T	intronic	SENP7	NA	NA	NA	intronic	ENSG00000138468	NA	NA	NA	NA	NA	3q12.3	NA	Name=AP-2gamma,Sin3Ak-20,YY1_(C-20),Pol2,Egr-1,YY1	Name=148	NA	rs9682156	0.2	0.2	NA	0.231629	0.17	0.3423	0.3746	0.1407	0.2025	0.14	0.31	0.3	0.09	0.2175	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.727699	1.727699	NA	NA	NA	ID=COSN166957;OCCURENCE=1(breast),1(large_intestine),3(endometrium)	NA	NA	5.6125
1091	3	101231894	101231894	T	G	intronic	SENP7	NA	NA	NA	intronic	ENSG00000138468	NA	NA	NA	NA	NA	3q12.3	NA	Name=Sin3Ak-20,YY1_(C-20),Pol2,Egr-1,AP-2gamma	Name=148	NA	rs9682312	NA	NA	NA	0.23143	0.17	0.3423	0.3732	0.1407	0.2025	NA	NA	NA	NA	0.2176	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.657396	NA	NA	NA	NA	ID=COSN166956;OCCURENCE=1(large_intestine)	NA	NA	5.6124
1091	12	6645565	6645565	T	C	intronic	GAPDH	NA	NA	NA	intronic	ENSG00000111640	NA	NA	NA	NA	NA	12p13.31	NA	Name=Pol2-4H8,Pol2(b),Pol2	Name=24	NA	rs2886093	0.48	0.48	0.457	0.502196	0.3877	0.5605	0.4078	0.5832	0.5174	0.4	0.56	0.41	0.55	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.190119	NA	NA	NA	NA	NA	0.493	NA	5.6123
1091	1	120054250	120054250	T	A	exonic	HSD3B1	NA	synonymous SNV	HSD3B1:NM_000862:exon3:c.T270A:p.G90G	exonic	ENSG00000203857	NA	synonymous SNV	ENSG00000203857:ENST00000528909:exon2:c.T270A:p.G90G,ENSG00000203857:ENST00000235547:exon3:c.T276A:p.G92G,ENSG00000203857:ENST00000369413:exon3:c.T270A:p.G90G	NA	NA	1p12	NA	NA	NA	NA	rs6202	0.1	0.1	0.09	0.128794	0.005	0.0546	0.0677	0.357	0.0675	0.0013	0.04	0.06	0.35	0.046	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.090687	NA	NA	0.003488	0.295279	NA	0.109	NA	5.6121786
1091	5	142254679	142254679	A	G	exonic	ARHGAP26	NA	synonymous SNV	ARHGAP26:NM_001135608:exon3:c.A255G:p.R85R,ARHGAP26:NM_015071:exon3:c.A255G:p.R85R	exonic	ENSG00000145819	NA	synonymous SNV	ENSG00000145819:ENST00000274498:exon3:c.A255G:p.R85R,ENSG00000145819:ENST00000378004:exon3:c.A255G:p.R85R,ENSG00000145819:ENST00000378013:exon3:c.A171G:p.R57R	Score=604;Name=lod=379	NA	5q31.3	NA	NA	NA	NA	rs185200	0.6	0.6	0.636	0.673722	0.3091	0.8581	0.5058	0.8979	0.6748	0.32	0.86	0.43	0.88	0.4468	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.228968	NA	NA	0.298721	0.780754	NA	0.536	NA	5.6120456
1091	6	32797537	32797537	T	G	intronic	TAP2	NA	NA	NA	intronic	ENSG00000204267,ENSG00000250264	NA	NA	NA	NA	NA	6p21.32	NA	Name=ZNF263	Name=3	NA	rs241439	0.4	0.4	0.383	0.423722	0.3887	0.5298	0.4035	0.3011	0.5307	0.38	0.52	0.39	0.29	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.120038	NA	NA	NA	NA	NA	0.304	NA	5.6113
1091	12	31815233	31815233	C	T	intronic	METTL20	NA	NA	NA	intronic	ENSG00000139160	NA	NA	NA	NA	NA	12p11.21	NA	Name=PU.1	Name=6	NA	rs56228550	0.09	0.09	0.073	0.086861	0.1392	0.1131	0.1239	0.0053	0.09	0.13	0.1	0.1	0.01	0.121	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.239225	NA	NA	0.129186	0.024512	NA	0.152	NA	5.610614
1091	3	58186719	58186719	C	A	intronic	DNASE1L3	NA	NA	NA	intronic	ENSG00000163687	NA	NA	NA	NA	NA	3p14.3	NA	Name=EBF,NFKB	Name=12	NA	rs3772985	0.21	0.21	0.217	0.221246	0.1193	0.2946	0.183	0.289	0.1861	0.13	0.3	0.16	0.28	0.1603	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.103011	NA	NA	0.109884	0.256015	NA	0.232	NA	5.610516
1091	19	17316253	17316253	T	C	intronic	MYO9B	NA	NA	NA	intronic	ENSG00000099331	NA	NA	NA	NA	NA	19p13.11	NA	Name=CTCF,Rad21,SMC3_(ab9263),CTCFL_(SC-98982),CTCF_(C-20),CTCF_(SC-5916),ZNF263	Name=124	NA	rs2305763	0.6	0.6	0.561	0.629792	0.3897	0.746	0.6772	0.708	0.6176	0.4	0.77	0.64	0.67	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.08657	NA	NA	NA	NA	NA	0.652	NA	5.6103
1091	14	77951143	77951143	T	C	exonic	ISM2	NA	synonymous SNV	ISM2:NM_182509:exon2:c.A261G:p.A87A,ISM2:NM_199296:exon2:c.A261G:p.A87A	exonic	ENSG00000100593	NA	synonymous SNV	ENSG00000100593:ENST00000342219:exon2:c.A261G:p.A87A,ENSG00000100593:ENST00000412904:exon2:c.A261G:p.A87A,ENSG00000100593:ENST00000493585:exon2:c.A261G:p.A87A,ENSG00000100593:ENST00000554801:exon2:c.A261G:p.A87A	NA	NA	14q24.3	NA	NA	NA	NA	rs77534020	0.01	0.01	0.007	0.0091853	0.0199	NA	0.0072	NA	0.0215	0.02	NA	0.01	0.01	0.0166	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.236842	NA	NA	0.019884	0.004993	NA	NA	NA	5.6102826
1091	6	96999725	96999725	C	T	exonic	UFL1	NA	synonymous SNV	UFL1:NM_015323:exon17:c.C1911T:p.D637D	exonic	ENSG00000014123	NA	synonymous SNV	ENSG00000014123:ENST00000369278:exon17:c.C1911T:p.D637D	Score=604;Name=lod=380	NA	6q16.1	NA	NA	NA	NA	rs1127175	0.33	0.33	0.329	0.326677	0.3698	0.3075	0.2911	0.326	0.3282	0.36	0.3	0.35	0.33	0.3383	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.570734	NA	NA	0.348534	0.333787	ID=COSM451949;OCCURENCE=1(breast),1(pancreas)	0.362	NA	5.6100326
1091	12	6143984	6143984	T	C	exonic	VWF	NA	nonsynonymous SNV	VWF:NM_000552:exon20:c.A2555G:p.Q852R	exonic	ENSG00000110799	NA	nonsynonymous SNV	ENSG00000110799:ENST00000261405:exon20:c.A2555G:p.Q852R	Score=500;Name=lod=143	NA	12p13.31	NA	NA	NA	NA	rs216321	0.9	0.9	0.887	0.896965	0.9135	0.7907	0.9265	0.9584	0.8855	0.91	0.79	0.93	0.97	0.8992	0.97	1	T	0.0	B	0.0	B	0.182	N	0.000	P	-0.04	N	-0.09	T	-0.939	T	0.000	T	0.043	0.022	4.126	0.423	-0.099	-0.541	10.041	0.021663	NA	1	0.910698	0.949614	NA	0.949	NA	5.6099354
1091	6	30887988	30887988	C	T	exonic	VARS2	NA	synonymous SNV	VARS2:NM_001167733:exon12:c.C868T:p.L290L,VARS2:NM_001167734:exon13:c.C1378T:p.L460L,VARS2:NM_020442:exon13:c.C1288T:p.L430L	exonic	ENSG00000137411	NA	synonymous SNV	ENSG00000137411:ENST00000321897:exon12:c.C1288T:p.L430L,ENSG00000137411:ENST00000542001:exon12:c.C868T:p.L290L,ENSG00000137411:ENST00000416670:exon13:c.C1288T:p.L430L,ENSG00000137411:ENST00000541562:exon13:c.C1378T:p.L460L	Score=417;Name=lod=66	NA	6p21.33	NA	NA	NA	NA	rs2249459	0.24	0.24	0.248	0.222045	0.3559	0.247	0.2075	0.0983	0.2362	0.35	0.28	0.2	0.06	0.3247	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.123204	NA	NA	0.376892	0.146592	NA	0.283	NA	5.6091746
1091	5	74063154	74063154	C	G	UTR5	NSA2	NM_001271665:c.-32C>G,NM_014886:c.-32C>G	NA	NA	UTR5	ENSG00000164346,ENSG00000164347	ENST00000296802:c.-32C>G;ENST00000296805:c.-3587G>C	NA	NA	NA	NA	5q13.3	Score=802;Name=V$PAX5_01	Name=ETS1,GATA-1,TAF1,GABP,Mxi1_(bHLH),Pol2,Egr-1,TCF4,Pol2(phosphoS2),Sin3Ak-20,YY1_(C-20),Pol2-4H8,ZNF263,KAP1,ZBTB7A_(SC-34508),NFKB,HEY1,p300,TBP,CHD2_(N-1250)	NA	NA	rs1043968	0.33	0.33	0.313	0.344249	0.2425	0.2063	0.3256	0.6142	0.2393	0.22	0.19	0.36	0.63	0.261	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.406358	NA	NA	0.220787	0.5575	NA	0.442	NA	5.6090464
1091	19	12089549	12089549	T	C	exonic	ZNF763	NA	synonymous SNV	ZNF763:NM_001012753:exon4:c.T819C:p.S273S	exonic	ENSG00000197054,ENSG00000267179	NA	synonymous SNV	ENSG00000197054:ENST00000545530:exon2:c.T444C:p.S148S,ENSG00000197054:ENST00000343949:exon4:c.T819C:p.S273S,ENSG00000197054:ENST00000358987:exon4:c.T810C:p.S270S,ENSG00000197054:ENST00000538752:exon4:c.T870C:p.S290S,ENSG00000267179:ENST00000590798:exon4:c.T870C:p.S290S	NA	NA	19p13.2	NA	NA	NA	NA	rs7254258	0.02	0.02	0.017	0.019369	0.0229	0.006	0.0144	0.0257	0.0245	0.02	0.01	0.02	0.03	0.0167	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.430805	NA	NA	0.018032	0.028057	NA	0.014	NA	5.6090346
1091	20	13695680	13695680	C	T	exonic	ESF1	NA	synonymous SNV	ESF1:NM_001276380:exon14:c.G2397A:p.R799R,ESF1:NM_016649:exon14:c.G2397A:p.R799R	exonic	ENSG00000089048	NA	synonymous SNV	ENSG00000089048:ENST00000202816:exon14:c.G2397A:p.R799R	Score=374;Name=lod=44	NA	20p12.1	NA	NA	NA	NA	rs6110019	0.27	0.27	0.266	0.241214	0.3777	0.2143	0.2911	0.1362	0.2352	0.37	0.25	0.31	0.12	0.31	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.211576	NA	NA	0.370465	0.15842	NA	0.297	NA	5.6085016
1091	19	610243	610243	C	G	intronic	HCN2	NA	NA	NA	intronic	ENSG00000099822	NA	NA	NA	NA	NA	19p13.3	NA	Name=ERalpha_a	Name=26	NA	rs34104611	0.1	0.1	0.088	0.127596	0.1233	0.0109	0.2032	0.1551	0.1616	0.12	0.01	0.17	0.12	0.1309	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.151522	NA	NA	0.137326	0.143214	NA	0.123	NA	5.608474
1091	19	39306425	39306425	A	C	intronic	ECH1	NA	NA	NA	intronic	ENSG00000104823	NA	NA	NA	NA	NA	19q13.2	NA	Name=c-Fos,NF-YB,SP1	Name=4	NA	rs2075588	0.49	0.49	0.491	0.556709	0.3917	0.381	0.5821	0.7874	0.5777	0.37	0.33	0.57	0.8	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.419395	NA	NA	NA	NA	ID=COSN165810;OCCURENCE=1(breast)	0.529	NA	5.6083
1091	1	157062696	157062696	G	T	exonic	ETV3L	NA	synonymous SNV	ETV3L:NM_001004341:exon5:c.C831A:p.L277L	exonic	ENSG00000253831	NA	synonymous SNV	ENSG00000253831:ENST00000454449:exon5:c.C831A:p.L277L	NA	NA	1q23.1	NA	NA	Name=35	NA	rs1176537	0.26	0.26	0.264	0.223842	0.3728	0.2381	0.2637	0.0908	0.2076	0.38	0.24	0.31	0.07	0.31	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.018724	NA	NA	0.375698	0.139128	ID=COSM1162576;OCCURENCE=1(pancreas),1(prostate)	0.312	NA	5.6081686
1091	6	167570528	167570528	C	T	exonic	GPR31	NA	synonymous SNV	GPR31:NM_005299:exon1:c.G792A:p.S264S	exonic	ENSG00000120436	NA	synonymous SNV	ENSG00000120436:ENST00000366834:exon1:c.G792A:p.S264S	NA	NA	6q27	NA	NA	NA	NA	rs35182330	0.01	0.01	0.006	0.00978435	0.0209	NA	0.0043	0.0023	0.0225	0.02	NA	0.01	0.0041	0.0166	0.021	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.249755	NA	NA	0.021047	0.006355	NA	0.007	NA	5.6081196
1091	6	30000687	30000687	T	C	ncRNA_intronic	ZNRD1-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000232757	NA	NA	NA	Score=769;Name=lod=1775	NA	6p22.1	NA	NA	NA	NA	rs16896923	0.07	0.07	0.053	0.0848642	0.0586	0.1925	0.0317	0.0008	0.1524	0.06	0.16	0.04	0.002	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.240676	NA	NA	NA	NA	NA	0.087	NA	5.6080666
1091	16	9935066	9935066	T	G	intronic	GRIN2A	NA	NA	NA	intronic	ENSG00000183454	NA	NA	NA	NA	NA	16p13.2	NA	Name=BATF,BCL11A,PU.1	Name=8	NA	rs6497540	0.3	0.3	0.297	0.298922	0.3926	0.0784	0.2795	0.4629	0.2219	0.39	0.06	0.34	0.42	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.26115	NA	NA	NA	NA	NA	0.377	NA	5.6074
1091	7	5024540	5024540	G	A	ncRNA_splicing	RNF216P1	NR_015449:exon4:c.417-1G>A,NR_023385:exon4:c.417-1G>A,NR_023384:exon4:c.417-1G>A	NA	NA	ncRNA_exonic	ENSG00000196204	NA	NA	NA	Score=616;Name=lod=427	NA	7p22.1	NA	NA	NA	NA	rs9689983	0.08	0.08	0.065	0.0634984	0.0596	0.1071	0.1354	0.0159	0.0358	0.05	0.11	0.14	0.02	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.887279	NA	NA	NA	NA	NA	0.051	NA	5.6070666
1091	5	148406386	148406386	T	C	intronic	SH3TC2	NA	NA	NA	exonic	ENSG00000169247	NA	nonsynonymous SNV	ENSG00000169247:ENST00000394358:exon12:c.A2564G:p.K855R	NA	NA	5q32	NA	NA	NA	NA	rs17722209	0.17	0.17	0.158	0.163738	0.1789	0.2024	0.1715	0.0666	0.2342	0.2	0.24	0.16	0.08	0.1921	0.24	0.85	T	0.004	B	0.005	B	.	.	1.000	P	.	.	-0.72	T	-1.089	T	0.000	T	0.022	-0.156	3.238	-1.9	-0.355	0.357	0.812	-0.155925	NA	0	0.188721	0.078756	ID=COSM149981;OCCURENCE=1(stomach)	0.094	NA	5.6069457
1091	12	9574042	9574042	C	A	ncRNA_exonic	DDX12P	NA	NA	NA	ncRNA_exonic	ENSG00000214826	NA	NA	NA	Score=569;Name=lod=273	NA	12p13.31	Score=979;Name=V$AP2REP_01	NA	NA	NA	rs7298124	0.49	0.49	0.451	0.473642	0.5308	0.5655	0.572	0.298	0.4877	0.53	0.53	0.51	0.36	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.377303	NA	0.03	0.529227	0.321532	ID=COSM469096;OCCURENCE=1(kidney)	0.101	NA	5.6066396
1091	3	184049143	184049143	C	T	exonic	EIF4G1	NA	synonymous SNV	EIF4G1:NM_004953:exon22:c.C3666T:p.V1222V,EIF4G1:NM_198242:exon25:c.C3759T:p.V1253V,EIF4G1:NM_198244:exon26:c.C3990T:p.V1330V,EIF4G1:NM_182917:exon28:c.C4254T:p.V1418V,EIF4G1:NM_001194947:exon29:c.C4272T:p.V1424V,EIF4G1:NM_198241:exon29:c.C4251T:p.V1417V,EIF4G1:NM_001194946:exon30:c.C4272T:p.V1424V	exonic	ENSG00000114867	NA	synonymous SNV	ENSG00000114867:ENST00000434061:exon22:c.C3666T:p.V1222V,ENSG00000114867:ENST00000435046:exon22:c.C3663T:p.V1221V,ENSG00000114867:ENST00000441154:exon23:c.C3762T:p.V1254V,ENSG00000114867:ENST00000350481:exon25:c.C3759T:p.V1253V,ENSG00000114867:ENST00000392537:exon26:c.C3990T:p.V1330V,ENSG00000114867:ENST00000411531:exon26:c.C4134T:p.V1378V,ENSG00000114867:ENST00000427845:exon26:c.C3993T:p.V1331V,ENSG00000114867:ENST00000319274:exon28:c.C4251T:p.V1417V,ENSG00000114867:ENST00000342981:exon28:c.C4254T:p.V1418V,ENSG00000114867:ENST00000424196:exon28:c.C4272T:p.V1424V,ENSG00000114867:ENST00000346169:exon29:c.C4251T:p.V1417V,ENSG00000114867:ENST00000352767:exon29:c.C4272T:p.V1424V,ENSG00000114867:ENST00000414031:exon29:c.C4131T:p.V1377V,ENSG00000114867:ENST00000382330:exon30:c.C4272T:p.V1424V	NA	NA	3q27.1	NA	NA	NA	NA	rs76779558	0.01	0.01	0.014	0.0141773	0.0159	0.0179	0.0086	0.0008	0.0307	0.02	0.03	0.01	NA	0.0191	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.510337	NA	NA	0.025116	0.004993	NA	NA	NA	5.6065506
1091	20	25666807	25666807	C	G	intronic	ZNF337	NA	NA	NA	intronic	ENSG00000130684	NA	NA	NA	NA	NA	20p11.1	NA	Name=CTCF	Name=9	NA	rs926486	0.24	0.24	0.246	0.29992	0.1133	0.0863	0.2752	0.6679	0.2321	0.12	0.07	0.26	0.62	0.1817	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.504807	NA	NA	0.098953	0.566046	NA	0.283	NA	5.606047
1091	8	29207845	29207845	C	T	UTR5	DUSP4	NM_001394:c.-50G>A	NA	NA	UTR5	ENSG00000120875	ENST00000240100:c.-50G>A	NA	NA	NA	NA	8p12	NA	Name=Pol2-4H8,ZNF263,HA-E2F1,YY1_(C-20)	Name=147	NA	rs3182143	0.31	0.31	0.227	0.298922	0.2356	0.6141	0.3847	0.0575	0.3047	0.25	0.6	0.33	0.07	0.2979	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.05177	NA	NA	0.193908	0.068501	NA	0.174	NA	5.6059254
1091	3	113594377	113594377	A	G	exonic	GRAMD1C	NA	synonymous SNV	GRAMD1C:NM_017577:exon4:c.A306G:p.L102L	exonic	ENSG00000178075	NA	synonymous SNV	ENSG00000178075:ENST00000358160:exon4:c.A306G:p.L102L,ENSG00000178075:ENST00000472384:exon4:c.A306G:p.L102L	NA	NA	3q13.31	Score=805;Name=V$CEBP_C	NA	NA	NA	rs13079383	0.29	0.29	0.251	0.242212	0.3638	0.2738	0.3314	0.0651	0.2607	0.36	0.31	0.35	0.09	0.324	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.215223	NA	NA	0.373372	0.106673	NA	0.297	NA	5.6054946
1092	4	166199812	166199812	A	G	ncRNA_exonic	GK3P	NA	NA	NA	ncRNA_exonic	ENSG00000229894	NA	NA	NA	Score=786;Name=lod=2087	NA	4q32.3	NA	NA	NA	NA	rs56919208	0.08	0.08	0.061	0.0946486	0.0189	0.0506	0.0389	0.2761	0.0123	0.02	0.04	0.04	0.23	0.043	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.92551	1.92551	0.07	NA	NA	NA	0.007	NA	5.6047666
1092	2	54858154	54858154	C	T	exonic	SPTBN1	NA	synonymous SNV	SPTBN1:NM_178313:exon15:c.C2931T:p.G977G,SPTBN1:NM_003128:exon16:c.C2970T:p.G990G	exonic	ENSG00000115306	NA	synonymous SNV	ENSG00000115306:ENST00000333896:exon15:c.C2931T:p.G977G,ENSG00000115306:ENST00000356805:exon16:c.C2970T:p.G990G	NA	NA	2p16.2	NA	NA	NA	NA	rs61732872	0.01	0.01	0.009	0.00738818	0.0239	NA	0.0144	NA	0.0031	0.02	NA	0.02	NA	0.0153	0.023	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.389472	NA	NA	0.022791	0.003858	NA	NA	NA	5.6046756
1092	9	100367810	100367810	G	A	exonic	TSTD2	NA	synonymous SNV	TSTD2:NM_139246:exon8:c.C1068T:p.T356T	exonic	ENSG00000136925	NA	synonymous SNV	ENSG00000136925:ENST00000375165:exon5:c.C288T:p.T96T,ENSG00000136925:ENST00000354801:exon6:c.C288T:p.T96T,ENSG00000136925:ENST00000341170:exon8:c.C1068T:p.T356T,ENSG00000136925:ENST00000375172:exon8:c.C390T:p.T130T	NA	NA	9q22.33	NA	NA	NA	NA	rs1928641	0.13	0.13	0.124	0.16873	0.002	0.1508	0.1628	0.4191	0.0245	NA	0.11	0.1	0.35	0.0581	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.171652	NA	NA	0.002093	0.369042	NA	0.109	NA	5.6044736
1092	19	9578459	9578459	C	T	exonic	ZNF560	NA	synonymous SNV	ZNF560:NM_152476:exon10:c.G1164A:p.P388P	exonic	ENSG00000198028	NA	synonymous SNV	ENSG00000198028:ENST00000301480:exon10:c.G1164A:p.P388P	NA	NA	19p13.2	NA	NA	NA	NA	rs16980696	0.04	0.04	0.046	0.0513179	0.0229	0.006	0.0101	0.1672	NA	0.03	0.0035	0.01	0.14	0.0241	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.772196	NA	NA	0.015233	0.135724	NA	0.094	NA	5.6044336
1092	9	100420976	100420976	G	A	exonic	NCBP1	NA	synonymous SNV	NCBP1:NM_002486:exon15:c.G1428A:p.L476L	exonic	ENSG00000136937	NA	synonymous SNV	ENSG00000136937:ENST00000375147:exon15:c.G1428A:p.L476L	NA	NA	9q22.33	NA	NA	NA	NA	rs2297155	0.13	0.13	0.127	0.16853	0.002	0.1498	0.1628	0.4191	0.0245	NA	0.11	0.1	0.35	0.0583	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.857259	NA	NA	0.001977	0.369042	NA	0.109	NA	5.6043896
1092	15	99799474	99799474	C	T	ncRNA_exonic	HSP90B2P	NA	NA	NA	ncRNA_exonic	ENSG00000259706	NA	NA	NA	Score=872;Name=lod=4651	NA	15q26.3	NA	NA	NA	NA	rs62023769	0.09	0.09	0.107	0.0754792	0.0626	0.1022	0.0663	0.1044	0.0286	0.07	0.13	0.06	0.11	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.124959	NA	NA	NA	NA	NA	0.051	NA	5.6040666
1092	12	121605189	121605189	C	T	intronic	P2RX7	NA	NA	NA	intronic	ENSG00000089041	NA	NA	NA	NA	NA	12q24.31	NA	Name=CEBPB	Name=37	NA	rs504677	0.28	0.28	0.27	0.291134	0.3966	0.1409	0.2017	0.3048	0.3824	0.4	0.12	0.21	0.31	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.033827	NA	NA	NA	NA	NA	0.341	NA	5.6034
1092	17	56344656	56344656	A	G	intronic	LPO	NA	NA	NA	intronic	ENSG00000167419	NA	NA	NA	NA	NA	17q22	NA	Name=Pol2	Name=2	NA	rs8178407	0.43	0.43	0.463	0.469449	0.3966	0.244	0.2867	0.8427	0.4018	0.39	0.23	0.3	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.020701	NA	NA	NA	NA	NA	0.464	NA	5.6034
1092	16	69354682	69354682	C	T	intronic	VPS4A	NA	NA	NA	intronic	ENSG00000132612	NA	NA	NA	NA	NA	16q22.1	Score=878;Name=V$BACH2_01	Name=Pol2	NA	NA	rs17702834	0.09	0.09	0.068	0.0794728	0.1173	0.0417	0.0922	0.0567	0.1012	0.12	0.05	0.1	0.06	0.1516	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.290261	3.290261	NA	0.12784	0.065706	NA	0.123	NA	5.60326
1092	2	73717656	73717656	A	G	exonic	ALMS1	NA	nonsynonymous SNV	ALMS1:NM_015120:exon10:c.A8567G:p.N2856S	exonic	ENSG00000116127	NA	nonsynonymous SNV	ENSG00000116127:ENST00000409009:exon9:c.A8441G:p.N2814S,ENSG00000116127:ENST00000264448:exon10:c.A8567G:p.N2856S	NA	NA	2p13.1	NA	NA	NA	NA	rs10193972	0.33	0.33	0.348	0.358227	0.2266	0.0089	0.3905	0.8578	0.1554	0.23	0.01	0.35	0.85	0.2661	0.85	0.51	T	0.0	B	0.0	B	.	.	1.000	P	-0.69	N	3.29	T	-1.092	T	0.000	T	0.008	-0.487	1.761	0.225	-0.690	-0.691	.	-0.48686	NA	0.06	0.237497	0.724511	NA	0.42	NA	5.6031364
1092	6	30919701	30919701	T	C	exonic	DPCR1	NA	synonymous SNV	DPCR1:NM_080870:exon2:c.T3460C:p.L1154L	exonic	ENSG00000168631	NA	synonymous SNV	ENSG00000168631:ENST00000462446:exon2:c.T3460C:p.L1154L	NA	NA	6p21.33	NA	Name=NFKB	NA	NA	rs2517449	0.25	0.25	0.247	0.235024	0.3579	0.2688	0.2133	0.0983	0.274	0.35	0.31	0.21	0.06	0.3313	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.381946	NA	NA	0.375	0.141398	NA	0.29	NA	5.6024666
1092	14	23443962	23443962	T	C	intronic	AJUBA	NA	NA	NA	intronic	ENSG00000129474,ENSG00000259132	NA	NA	NA	Score=251;Name=lod=14	NA	14q11.2	NA	NA	Name=35	NA	rs941721	0.4	0.4	0.385	0.383187	0.3976	0.1964	0.3487	0.652	0.2219	0.39	0.22	0.36	0.66	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.212912	NA	NA	NA	NA	NA	0.435	NA	5.6024
1092	19	50140092	50140092	G	A	exonic	RRAS	NA	synonymous SNV	RRAS:NM_006270:exon3:c.C333T:p.N111N	exonic	ENSG00000126458	NA	synonymous SNV	ENSG00000126458:ENST00000246792:exon3:c.C333T:p.N111N	Score=517;Name=lod=168	NA	19q13.33	NA	NA	Name=3	NA	rs1865077	0.77	0.77	0.749	0.738219	0.6978	0.8343	0.7954	0.7799	0.5838	0.7	0.86	0.75	0.78	0.7034	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.080678	NA	NA	0.663256	0.762369	NA	0.783	NA	5.6022106
1092	17	73513619	73513619	C	A	intronic	TSEN54	NA	NA	NA	intronic	ENSG00000182173	NA	NA	NA	NA	NA	17q25.1	NA	Name=Pbx3,CTCF	Name=43	NA	rs56895494	0.1	0.1	0.102	0.0938498	0.1412	0.0298	0.0865	0.0998	0.1084	0.14	0.03	0.13	0.11	0.1194	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.019831	2.019831	NA	0.137674	0.121425	NA	0.188	NA	5.601726
1092	12	43860526	43860526	A	G	exonic	ADAMTS20	NA	synonymous SNV	ADAMTS20:NM_025003:exon9:c.T1296C:p.P432P	exonic	ENSG00000173157	NA	synonymous SNV	ENSG00000173157:ENST00000389420:exon9:c.T1296C:p.P432P,ENSG00000173157:ENST00000553158:exon9:c.T1296C:p.P432P	Score=536;Name=lod=201	NA	12q12	NA	NA	NA	NA	rs11182088	0.42	0.42	0.38	0.431709	0.3469	0.7629	0.3213	0.239	0.5164	0.34	0.77	0.3	0.25	0.3771	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.607159	NA	NA	0.341242	0.256241	NA	0.268	NA	5.6014246
1092	6	31122564	31122564	C	G	exonic	CCHCR1	NA	synonymous SNV	CCHCR1:NM_001105563:exon4:c.G402C:p.L134L,CCHCR1:NM_001105564:exon4:c.G510C:p.L170L,CCHCR1:NM_019052:exon4:c.G243C:p.L81L	exonic	ENSG00000204536	NA	synonymous SNV	ENSG00000204536:ENST00000428174:exon3:c.G321C:p.L107L,ENSG00000204536:ENST00000513222:exon3:c.G165C:p.L55L,ENSG00000204536:ENST00000376266:exon4:c.G243C:p.L81L,ENSG00000204536:ENST00000396263:exon4:c.G243C:p.L81L,ENSG00000204536:ENST00000396268:exon4:c.G510C:p.L170L,ENSG00000204536:ENST00000426967:exon4:c.G537C:p.L179L,ENSG00000204536:ENST00000448141:exon4:c.G135C:p.L45L,ENSG00000204536:ENST00000448162:exon4:c.G243C:p.L81L,ENSG00000204536:ENST00000451521:exon4:c.G402C:p.L134L,ENSG00000204536:ENST00000502557:exon4:c.G243C:p.L81L,ENSG00000204536:ENST00000503420:exon4:c.G135C:p.L45L,ENSG00000204536:ENST00000503934:exon4:c.G243C:p.L81L,ENSG00000204536:ENST00000507751:exon4:c.G243C:p.L81L,ENSG00000204536:ENST00000508683:exon4:c.G135C:p.L45L,ENSG00000204536:ENST00000455279:exon5:c.G243C:p.L81L,ENSG00000204536:ENST00000507226:exon5:c.G243C:p.L81L,ENSG00000204536:ENST00000507829:exon5:c.G243C:p.L81L	NA	NA	6p21.33	NA	NA	NA	NA	rs144885162	0.01	0.01	0.005	0.0081869	0.0199	NA	0.0159	NA	0.0102	0.02	NA	0.02	0.002	0.0168	0.029	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.973438	NA	NA	0.028619	0.004645	NA	0.007	NA	5.6013476
1092	15	93567864	93567864	A	C	exonic	CHD2	NA	synonymous SNV	CHD2:NM_001271:exon39:c.A5416C:p.R1806R	exonic	ENSG00000173575	NA	synonymous SNV	ENSG00000173575:ENST00000394196:exon39:c.A5416C:p.R1806R	Score=504;Name=lod=149	NA	15q26.1	NA	NA	NA	NA	rs12906163	0.2	0.2	0.188	0.186502	0.3698	0.0575	0.2248	0.0855	0.2403	0.37	0.05	0.23	0.09	0.2946	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.351503	1.351503	NA	0.400972	0.125	NA	0.246	NA	5.6012946
1092	14	90767607	90767607	C	T	exonic	NRDE2	NA	synonymous SNV	NRDE2:NM_017970:exon7:c.G1521A:p.V507V	exonic	ENSG00000119720	NA	synonymous SNV	ENSG00000119720:ENST00000554464:exon3:c.G258A:p.V86V,ENSG00000119720:ENST00000357904:exon5:c.G828A:p.V276V,ENSG00000119720:ENST00000354366:exon7:c.G1521A:p.V507V	Score=325;Name=lod=28	NA	14q32.11	NA	NA	Name=8	NA	rs3825661	0.69	0.69	0.669	0.676318	0.671	0.7976	0.6484	0.5673	0.7239	0.68	0.8	0.65	0.61	0.6969	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.210936	NA	NA	0.698023	0.595325	NA	0.674	NA	5.6007436
1092	6	32029226	32029226	A	G	exonic	TNXB	NA	synonymous SNV	TNXB:NM_019105:exon21:c.T7440C:p.Y2480Y	exonic	ENSG00000168477	NA	synonymous SNV	ENSG00000168477:ENST00000375244:exon21:c.T7440C:p.Y2480Y,ENSG00000168477:ENST00000375247:exon21:c.T7440C:p.Y2480Y	Score=407;Name=lod=60	NA	6p21.33	Score=882;Name=V$AREB6_01	NA	NA	NA	rs204887	0.63	0.63	0.62	0.639976	0.6938	0.6577	0.6643	0.4788	0.7669	0.7	0.63	0.64	0.5	0.6907	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.467311	NA	NA	0.682032	0.541893	ID=COSM1443500,COSM1443499;OCCURENCE=1(large_intestine)	0.688	NA	5.6001346
1092	9	90500405	90500405	A	C	exonic	SPATA31E1	NA	nonsynonymous SNV	SPATA31E1:NM_178828:exon4:c.A1003C:p.T335P	exonic	ENSG00000177992	NA	nonsynonymous SNV	ENSG00000177992:ENST00000325643:exon4:c.A1003C:p.T335P	NA	NA	9q22.1	NA	NA	NA	NA	rs7850542	0.75	0.75	0.761	0.761781	0.5686	0.878	0.7205	0.9493	0.6166	0.57	0.87	0.71	0.94	0.6239	0.94	1	T	0.0	B	0.0	B	0.924	N	1.000	P	-2.195	N	4.1	T	-1.009	T	0.000	T	0.039	-1.796	0.01	0.534	0.071	-0.432	3.231	-1.79553	NA	1	0.541512	0.880617	NA	0.717	NA	5.5993214
1092	7	23164701	23164701	C	T	exonic	KLHL7	NA	synonymous SNV	KLHL7:NM_001031710:exon4:c.C352T:p.L118L,KLHL7:NM_001172428:exon4:c.C352T:p.L118L,KLHL7:NM_018846:exon4:c.C208T:p.L70L	exonic	ENSG00000122550	NA	synonymous SNV	ENSG00000122550:ENST00000539124:exon3:c.C124T:p.L42L,ENSG00000122550:ENST00000322275:exon4:c.C352T:p.L118L,ENSG00000122550:ENST00000339077:exon4:c.C352T:p.L118L,ENSG00000122550:ENST00000409689:exon4:c.C208T:p.L70L,ENSG00000122550:ENST00000545443:exon4:c.C286T:p.L96L,ENSG00000122550:ENST00000322231:exon5:c.C286T:p.L96L,ENSG00000122550:ENST00000410047:exon5:c.C286T:p.L96L,ENSG00000122550:ENST00000545771:exon5:c.C286T:p.L96L	Score=697;Name=lod=908	NA	7p15.3	NA	NA	NA	NA	rs15775	0.41	0.41	0.447	0.420327	0.3449	0.3462	0.3156	0.711	0.2556	0.33	0.32	0.35	0.71	0.3537	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.963435	NA	NA	0.369272	0.631758	NA	0.42	NA	5.5987946
1092	15	40313141	40313141	C	T	exonic	EIF2AK4	NA	synonymous SNV	EIF2AK4:NM_001013703:exon31:c.C4215T:p.G1405G	exonic	ENSG00000128829	NA	synonymous SNV	ENSG00000128829:ENST00000382727:exon30:c.C4131T:p.G1377G,ENSG00000128829:ENST00000263791:exon31:c.C4215T:p.G1405G	Score=582;Name=lod=309	NA	15q15.1	NA	NA	NA	NA	rs3207297	0.31	0.31	0.3	0.305112	0.3569	0.249	0.2939	0.292	0.3354	0.33	0.26	0.36	0.28	0.3459	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.222934	NA	NA	0.36521	0.335159	NA	0.413	NA	5.5986566
1092	22	26194045	26194045	T	C	exonic	MYO18B	NA	synonymous SNV	MYO18B:NM_032608:exon12:c.T2502C:p.G834G	exonic	ENSG00000133454	NA	synonymous SNV	ENSG00000133454:ENST00000335473:exon12:c.T2502C:p.G834G,ENSG00000133454:ENST00000407587:exon12:c.T2502C:p.G834G,ENSG00000133454:ENST00000536101:exon12:c.T2502C:p.G834G	Score=300;Name=lod=22	NA	22q12.1	Score=756;Name=V$BRACH_01	NA	NA	NA	rs738643	0.58	0.58	0.551	0.56889	0.6978	0.6647	0.6282	0.2655	0.7055	0.69	0.67	0.61	0.27	0.6636	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.426068	NA	NA	0.706717	0.353652	NA	0.529	NA	5.5985496
1092	20	55940426	55940426	G	A	exonic	RAE1	NA	synonymous SNV	RAE1:NM_001015885:exon5:c.G303A:p.V101V,RAE1:NM_003610:exon5:c.G303A:p.V101V	exonic	ENSG00000101146	NA	synonymous SNV	ENSG00000101146:ENST00000371242:exon5:c.G303A:p.V101V,ENSG00000101146:ENST00000395840:exon5:c.G303A:p.V101V,ENSG00000101146:ENST00000395841:exon5:c.G303A:p.V101V,ENSG00000101146:ENST00000429339:exon5:c.G303A:p.V101V,ENSG00000101146:ENST00000492498:exon5:c.G303A:p.V101V,ENSG00000101146:ENST00000527947:exon5:c.G303A:p.V101V,ENSG00000101146:ENST00000411894:exon6:c.G303A:p.V101V	NA	NA	20q13.31	NA	NA	NA	NA	rs6099582	0.03	0.03	0.033	0.0321486	0.0219	NA	0.0144	0.084	0.0184	0.02	NA	0.02	0.08	0.0254	0.087	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.191623	NA	NA	0.022442	0.087154	NA	0.072	NA	5.5969246
1092	21	9590334	9590334	C	A	intergenic	NONE,MIR3648	dist=NONE;dist=235498	NA	NA	intergenic	NONE,ENSG00000238411	dist=NONE;dist=92857	NA	NA	Score=417;Name=lod=66	NA	21p11.2	NA	Name=SMC3_(ab9263),Rad21,CTCF,CTCF_(SC-5916)	Name=7	NA	rs66854923	0.77	0.77	0.773	0.860024	0.7366	0.8919	0.8184	0.966	0.8405	0.66	0.85	0.77	0.86	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.532951	NA	NA	NA	NA	NA	NA	NA	5.5967334
1092	5	178770718	178770718	A	G	intronic	ADAMTS2	NA	NA	NA	intronic	ENSG00000087116	NA	NA	NA	NA	NA	5q35.3	Score=813;Name=V$STAT5A_02	NA	Name=3	NA	rs2271214	0.19	0.19	0.175	0.195487	0.1402	0.3115	0.147	0.1165	0.274	0.14	0.33	0.14	0.14	0.1602	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.005819	NA	NA	0.103117	0.081638	NA	0.203	NA	5.596483
1092	1	21935467	21935467	G	A	intronic	RAP1GAP	NA	NA	NA	intronic	ENSG00000076864	NA	NA	NA	NA	NA	1p36.12	NA	Name=MafK_(SC-477),Pol2(b),MafF_(M8194),TAL1_(SC-12984),PU.1,NRSF,eGFP-JunD,ZBTB7A_(SC-34508),MafK_(ab50322),IRF1	Name=3	NA	rs12130950	0.1	0.1	0.089	0.113818	0.1412	0.0347	0.0836	0.1142	0.1881	0.14	0.02	0.1	0.12	0.1285	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.845041	NA	NA	0.133837	0.117794	NA	0.188	NA	5.596463
1092	20	55909085	55909085	T	G	exonic	SPO11	NA	synonymous SNV	SPO11:NM_198265:exon4:c.T330G:p.T110T,SPO11:NM_012444:exon5:c.T444G:p.T148T	exonic	ENSG00000054796	NA	synonymous SNV	ENSG00000054796:ENST00000345868:exon4:c.T330G:p.T110T,ENSG00000054796:ENST00000371260:exon4:c.T330G:p.T110T,ENSG00000054796:ENST00000371263:exon5:c.T444G:p.T148T,ENSG00000054796:ENST00000418127:exon5:c.T378G:p.T126T	NA	NA	20q13.31	NA	NA	NA	NA	rs16980893	0.03	0.03	0.03	0.0319489	0.0219	NA	0.0144	0.0832	0.0184	0.02	NA	0.02	0.07	0.0259	0.085	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.761772	NA	NA	0.022463	0.084884	NA	0.087	NA	5.5964036
1092	17	25607721	25607721	C	G	intergenic	NONE,MIR4522	dist=NONE;dist=13215	NA	NA	ncRNA_exonic	ENSG00000213664	NA	NA	NA	Score=701;Name=lod=944	NA	17q11.1	NA	Name=MafK_(ab50322),eGFP-GATA2,STAT1	NA	NA	rs6505182	0.43	0.43	0.44	0.474241	0.4036	0.2569	0.3818	0.7012	0.5297	0.4	0.25	0.4	0.7	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.117384	NA	NA	NA	NA	NA	0.507	NA	5.5964
1092	2	185802243	185802243	C	A	exonic	ZNF804A	NA	nonsynonymous SNV	ZNF804A:NM_194250:exon4:c.C2120A:p.T707K	exonic	ENSG00000170396	NA	nonsynonymous SNV	ENSG00000170396:ENST00000302277:exon4:c.C2120A:p.T707K	NA	NA	2q32.1	NA	NA	NA	NA	rs1366842	0.56	0.56	0.495	0.490016	0.5825	0.8383	0.6326	0.059	0.5174	0.61	0.86	0.61	0.08	0.5777	0.86	1	T	0.002	B	0.002	B	0.654	N	1.000	P	1.39	L	3.45	T	-0.942	T	0.000	T	0.035	-0.891	0.457	1.86	0.065	0.066	5.764	-0.890751	NA	0.96	0.576735	0.1399	NA	0.457	NA	5.5963984
1092	2	131130678	131130678	T	C	intronic	PTPN18	NA	NA	NA	intronic	ENSG00000072135	NA	NA	NA	NA	NA	2q21.1	NA	Name=TAF1	Name=5	NA	rs10189689	0.32	0.32	0.316	0.344649	0.2008	0.3214	0.2378	0.6324	0.2035	0.2	0.31	0.25	0.56	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.855959	NA	NA	0.203099	0.566008	NA	0.29	NA	5.596101
1092	16	28993049	28993049	A	C	intronic	SPNS1	NA	NA	NA	ncRNA_exonic	ENSG00000261067	NA	NA	NA	NA	NA	16p11.2	NA	Name=CTCF,Rad21,ELF1_(SC-631),SMC3_(ab9263),CTCFL_(SC-98982),ZBTB7A_(SC-34508),CTCF_(C-20),CTCF_(SC-5916)	Name=31	NA	rs6565300	0.81	0.81	0.872	0.823482	0.7376	0.9206	0.5461	0.9599	0.8241	0.73	0.91	0.64	0.95	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.417028	NA	NA	NA	NA	NA	0.891	NA	5.5957333
1093	2	220414019	220414019	T	C	exonic	TMEM198	NA	synonymous SNV	TMEM198:NM_001005209:exon4:c.T888C:p.P296P	exonic	ENSG00000188760	NA	synonymous SNV	ENSG00000188760:ENST00000373883:exon4:c.T888C:p.P296P,ENSG00000188760:ENST00000344458:exon5:c.T888C:p.P296P	Score=581;Name=lod=307	NA	2q35	NA	NA	NA	NA	rs13023533	0.43	0.43	0.03	0.392372	0.4592	0.38	0.5231	0.4077	0.2229	0.47	0.4	0.47	0.39	0.4339	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.665136	1.665136	NA	0.178721	0.162506	ID=COSM442365,COSM442364;OCCURENCE=1(breast)	0.486	NA	5.5948456
1093	11	100909809	100909809	A	G	UTR3	PGR	NM_001202474:c.*38T>C,NM_000926:c.*38T>C,NM_001271161:c.*38T>C,NM_001271162:c.*38T>C	NA	NA	UTR3	ENSG00000082175	ENST00000325455:c.*38T>C,ENST00000534013:c.*38T>C	NA	NA	Score=272;Name=lod=17	NA	11q22.1	Score=1000;Name=V$AML1_01	NA	NA	NA	rs484389	0.29	0.29	0.293	0.261781	0.2535	0.2133	0.2651	0.413	0.1135	0.26	0.23	0.3	0.41	0.2407	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.449133	NA	NA	0.244292	0.368373	NA	0.362	NA	5.5948414
1093	14	24654489	24654489	T	C	exonic	IPO4	NA	synonymous SNV	IPO4:NM_024658:exon14:c.A1308G:p.V436V	exonic	ENSG00000196497	NA	synonymous SNV	ENSG00000196497:ENST00000354464:exon14:c.A1308G:p.V436V,ENSG00000196497:ENST00000560155:exon14:c.A1308G:p.V436V	Score=429;Name=lod=74	NA	14q12	NA	NA	NA	NA	rs2025258	0.46	0.46	0.482	0.461661	0.339	0.7897	0.2939	0.3782	0.4816	0.34	0.82	0.3	0.36	0.391	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.096624	NA	NA	0.341875	0.370546	NA	0.42	NA	5.5947916
1093	2	86707313	86707313	G	A	exonic	KDM3A	NA	synonymous SNV	KDM3A:NM_001146688:exon16:c.G2340A:p.P780P,KDM3A:NM_018433:exon16:c.G2340A:p.P780P	exonic	ENSG00000115548	NA	synonymous SNV	ENSG00000115548:ENST00000542128:exon14:c.G2184A:p.P728P,ENSG00000115548:ENST00000312912:exon16:c.G2340A:p.P780P,ENSG00000115548:ENST00000409064:exon16:c.G2340A:p.P780P,ENSG00000115548:ENST00000409556:exon17:c.G2340A:p.P780P	NA	NA	2p11.2	NA	NA	NA	NA	rs61748134	0.03	0.03	0.022	0.0273562	0.0278	0.0724	0.0216	0.0008	0.0204	0.03	0.05	0.02	NA	0.0205	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.331456	NA	NA	0.023953	0.004539	NA	0.022	NA	5.5944136
1093	15	64275645	64275645	G	A	intronic	DAPK2	NA	NA	NA	intronic	ENSG00000035664	NA	NA	NA	NA	NA	15q22.31	NA	Name=CTCF_(SC-5916),CTCF_(C-20),PU.1,SMC3_(ab9263),CTCF,EBF1_(C-8),Rad21	Name=32	NA	rs55986634	0.2	0.2	0.169	0.162141	0.4056	0.0069	0.3818	0.0212	0.1063	0.4	0.0035	0.36	0.02	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.773628	NA	NA	NA	NA	NA	0.094	NA	5.5944
1093	20	62520674	62520674	G	T	intronic	TPD52L2	NA	NA	NA	intronic	ENSG00000101150	NA	NA	NA	NA	NA	20q13.33	NA	Name=STAT3	Name=16	NA	rs6010690	0.56	0.56	0.553	0.599641	0.4056	0.8304	0.5519	0.4955	0.7362	0.41	0.83	0.54	0.5	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.292291	NA	NA	NA	NA	NA	0.529	NA	5.5944
1093	17	7318935	7318935	C	T	exonic	NLGN2	NA	synonymous SNV	NLGN2:NM_020795:exon6:c.C1143T:p.G381G	exonic	ENSG00000169992	NA	synonymous SNV	ENSG00000169992:ENST00000302926:exon6:c.C1143T:p.G381G,ENSG00000169992:ENST00000575301:exon7:c.C1143T:p.G381G	NA	NA	17p13.1	Score=828;Name=V$COMP1_01	NA	NA	NA	rs12947017	0.26	0.26	0.227	0.192292	0.3827	0.1835	0.2464	0.1036	0.0869	0.39	0.2	0.31	0.09	0.2983	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.10708	NA	NA	0.391395	0.150477	NA	0.21	NA	5.5942716
1093	14	106866675	106866675	C	G	intergenic	LINC00226,LINC00221	dist=121709;dist=71780	NA	NA	exonic	ENSG00000211958	NA	nonsynonymous SNV	ENSG00000211958:ENST00000390618:exon2:c.G79C:p.G27R	Score=352;Name=lod=36	NA	14q32.33	NA	NA	NA	NA	rs76077658	NA	NA	0.079	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.174	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.229779	2.229779	0.01	0.065492	0.293042	NA	NA	NA	5.5938414
1093	1	226474132	226474132	G	A	exonic	LIN9	NA	synonymous SNV	LIN9:NM_001270409:exon5:c.C369T:p.F123F,LIN9:NM_001270410:exon6:c.C270T:p.F90F,LIN9:NM_173083:exon6:c.C474T:p.F158F	exonic	ENSG00000183814	NA	synonymous SNV	ENSG00000183814:ENST00000366801:exon5:c.C321T:p.F107F,ENSG00000183814:ENST00000460719:exon5:c.C354T:p.F118F,ENSG00000183814:ENST00000481685:exon5:c.C369T:p.F123F,ENSG00000183814:ENST00000328205:exon6:c.C474T:p.F158F,ENSG00000183814:ENST00000366808:exon6:c.C639T:p.F213F	Score=483;Name=lod=123	NA	1q42.12	Score=854;Name=V$FREAC7_01	NA	NA	NA	rs10799347	0.72	0.72	0.697	0.707468	0.6799	0.745	0.6657	0.7542	0.6636	0.71	0.75	0.66	0.73	0.707	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.162472	NA	NA	0.686017	0.740917	NA	0.659	NA	5.5937496
1093	20	62520671	62520671	T	C	intronic	TPD52L2	NA	NA	NA	intronic	ENSG00000101150	NA	NA	NA	NA	NA	20q13.33	NA	Name=STAT3	Name=16	NA	rs6062569	0.55	0.55	0.524	0.586062	0.4066	0.8304	0.549	0.444	0.7372	0.41	0.83	0.54	0.43	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.066508	NA	NA	NA	NA	NA	0.5	NA	5.5934
1093	14	45650813	45650813	G	A	intronic	FANCM	NA	NA	NA	intronic	ENSG00000187790	NA	NA	NA	NA	NA	14q21.2	NA	Name=c-Fos	Name=36	NA	rs8020533	0.21	0.21	0.223	0.232029	0.1292	0.128	0.1729	0.4455	0.1984	0.14	0.13	0.16	0.46	0.1587	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.302612	2.302612	NA	0.118948	0.334696	NA	0.217	NA	5.593152
1093	17	9066001	9066001	C	T	intronic	NTN1	NA	NA	NA	intronic	ENSG00000065320	NA	NA	NA	NA	NA	17p13.1	NA	Name=CTCF	Name=9	NA	rs2072321	0.35	0.35	0.341	0.338259	0.4076	0.3532	0.3732	0.2935	0.2873	0.41	0.32	0.36	0.29	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.297142	NA	NA	NA	NA	NA	0.326	NA	5.5924
1093	X	1713021	1713021	C	T	exonic	AKAP17A	NA	synonymous SNV	AKAP17A:NM_005088:exon2:c.C666T:p.R222R	exonic	ENSG00000197976	NA	synonymous SNV	ENSG00000197976:ENST00000313871:exon2:c.C666T:p.R222R,ENSG00000197976:ENST00000381261:exon2:c.C666T:p.R222R,ENSG00000197976:ENST00000474361:exon2:c.C666T:p.R222R	Score=654;Name=lod=608	NA	Xp22.33	NA	NA	NA	NA	rs6644621	0.57	0.57	0.60493	NA	NA	NA	NA	NA	NA	0.58	0.55	0.52	0.58	0.5414	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.246718	NA	NA	0.534218	0.554698	NA	0.659	NA	5.5910486
1093	11	102595492	102595492	G	A	exonic	MMP8	NA	nonsynonymous SNV	MMP8:NM_002424:exon1:c.C95T:p.T32I	exonic	ENSG00000118113	NA	nonsynonymous SNV	ENSG00000118113:ENST00000236826:exon1:c.C95T:p.T32I,ENSG00000118113:ENST00000531168:exon1:c.C95T:p.T32I,ENSG00000118113:ENST00000532799:exon1:c.C95T:p.T32I,ENSG00000118113:ENST00000533258:exon1:c.C95T:p.T32I,ENSG00000118113:ENST00000528662:exon2:c.C95T:p.T32I	NA	NA	11q22.2	NA	NA	NA	NA	rs3765620	0.63	0.63	0.633	0.654353	0.5885	0.5774	0.5605	0.8147	0.6513	0.57	0.6	0.59	0.81	0.5972	0.81	0.26	T	0.0	B	0.001	B	0.174	N	1.000	P	-0.43	N	1.29	T	-0.944	T	0.000	T	0.245	1.428	10.71	0.964	-0.276	0.819	8.360	1.428057	1.428057	0.3	0.556874	0.751021	NA	0.609	NA	5.5907594
1093	2	62065851	62065851	C	T	intronic	FAM161A	NA	NA	NA	intronic	ENSG00000170264	NA	NA	NA	Score=635;Name=lod=508	NA	2p15	NA	NA	Name=17	NA	rs17513666	0.15	0.15	0.127	0.118211	0.2227	0.0863	0.1441	0.0469	0.1217	0.23	0.1	0.18	0.06	0.1866	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.503191	3.503191	NA	NA	NA	NA	0.072	NA	5.5907
1093	19	1068734	1068734	T	C	exonic	HMHA1	NA	synonymous SNV	HMHA1:NM_001258328:exon2:c.T460C:p.L154L,HMHA1:NM_012292:exon2:c.T412C:p.L138L	exonic	ENSG00000180448	NA	synonymous SNV	ENSG00000180448:ENST00000313093:exon2:c.T412C:p.L138L,ENSG00000180448:ENST00000539243:exon2:c.T460C:p.L154L,ENSG00000180448:ENST00000586866:exon2:c.T424C:p.L142L,ENSG00000180448:ENST00000587186:exon2:c.T427C:p.L143L,ENSG00000180448:ENST00000590214:exon2:c.T493C:p.L165L	NA	NA	19p13.3	NA	NA	Name=8	NA	rs3764653	0.4	0.4	0.38	0.404752	0.3449	0.3611	0.3862	0.5265	0.3599	0.36	0.4	0.38	0.48	0.3822	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.597356	NA	NA	0.348929	0.509773	NA	0.319	NA	5.5906376
1093	2	73455600	73455600	C	T	exonic	PRADC1	NA	synonymous SNV	PRADC1:NM_032319:exon5:c.G549A:p.P183P	exonic	ENSG00000135617	NA	synonymous SNV	ENSG00000135617:ENST00000258083:exon5:c.G549A:p.P183P	NA	NA	2p13.2	NA	NA	NA	NA	rs11559241	0.07	0.07	0.076	0.0712859	0.0268	NA	0.0447	0.2262	NA	0.02	NA	0.06	0.24	0.0313	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.006327	NA	NA	0.018256	0.186791	NA	0.123	NA	5.5903106
1093	11	56954846	56954846	C	T	exonic	LRRC55	NA	synonymous SNV	LRRC55:NM_001005210:exon2:c.C918T:p.F306F	exonic	ENSG00000183908	NA	synonymous SNV	ENSG00000183908:ENST00000497933:exon2:c.C918T:p.F306F	Score=492;Name=lod=133	NA	11q12.1	NA	NA	NA	NA	rs716745	0.26	0.26	0.266	0.241813	0.3817	0.1925	0.255	0.1422	0.274	0.37	0.2	0.27	0.13	0.3152	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.084701	NA	NA	0.379772	0.179464	NA	0.297	NA	5.5899946
1093	1	17739586	17739586	G	A	exonic	RCC2	NA	synonymous SNV	RCC2:NM_001136204:exon9:c.C1296T:p.I432I,RCC2:NM_018715:exon10:c.C1296T:p.I432I	exonic	ENSG00000179051	NA	synonymous SNV	ENSG00000179051:ENST00000375433:exon9:c.C1296T:p.I432I,ENSG00000179051:ENST00000375436:exon10:c.C1296T:p.I432I	Score=616;Name=lod=424	NA	1p36.13	NA	NA	NA	NA	rs942457	0.32	0.32	0.313	0.330871	0.3688	0.1647	0.3689	0.3661	0.3885	0.38	0.17	0.38	0.37	0.3577	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.261115	1.261115	NA	0.351395	0.388107	NA	0.246	NA	5.5887716
1093	15	85721926	85721926	G	A	intergenic	PDE8A,LOC642423	dist=39550;dist=25981	NA	NA	ncRNA_exonic	ENSG00000259270	NA	NA	NA	Score=300;Name=lod=22	NA	15q25.3	NA	Name=HEY1	NA	NA	rs8030425	0.39	0.39	0.401	0.400559	0.4115	0.4077	0.2939	0.3517	0.5235	0.41	0.44	0.31	0.38	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.235775	NA	NA	NA	NA	ID=COSN165031;OCCURENCE=1(breast)	0.326	NA	5.5885
1093	7	102462636	102462636	T	C	exonic	FBXL13	NA	synonymous SNV	FBXL13:NM_001111038:exon18:c.A1734G:p.A578A,FBXL13:NM_145032:exon19:c.A1869G:p.A623A	exonic	ENSG00000161040	NA	synonymous SNV	ENSG00000161040:ENST00000379306:exon12:c.A1023G:p.A341A,ENSG00000161040:ENST00000456695:exon12:c.A1023G:p.A341A,ENSG00000161040:ENST00000379305:exon18:c.A1785G:p.A595A,ENSG00000161040:ENST00000379308:exon18:c.A1734G:p.A578A,ENSG00000161040:ENST00000393772:exon18:c.A1785G:p.A595A,ENSG00000161040:ENST00000455112:exon18:c.A1734G:p.A578A,ENSG00000161040:ENST00000313221:exon19:c.A1869G:p.A623A,ENSG00000161040:ENST00000436908:exon19:c.A1869G:p.A623A	NA	NA	7q22.1	NA	Name=MafK_(ab50322)	NA	NA	rs10279449	0.49	0.49	0.503	0.523363	0.3181	0.5744	0.3602	0.7451	0.498	0.34	0.58	0.37	0.73	0.4047	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.810657	NA	NA	0.355581	0.682025	NA	0.507	NA	5.5882856
1093	3	109128692	109128692	C	T	upstream	FLJ25363	NA	NA	NA	ncRNA_exonic	ENSG00000230618	NA	NA	NA	Score=691;Name=lod=860	NA	3q13.13	NA	Name=CTCF	NA	NA	rs808802	0.6	0.6	0.591	0.58726	0.5785	0.7837	0.5663	0.3949	0.6687	0.59	0.8	0.54	0.42	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.244582	NA	0	NA	NA	NA	0.514	NA	5.5881666
1093	3	197348638	197348638	G	A	ncRNA_exonic	LOC220729	NA	NA	NA	ncRNA_exonic	ENSG00000214135	NA	NA	NA	Score=650;Name=lod=586	NA	3q29	NA	NA	NA	NA	rs11558292	0.06	0.06	0.06	0.0696885	0.0785	NA	0.036	0.1437	0.0562	0.08	NA	0.04	0.11	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.262345	NA	NA	NA	NA	NA	0.007	NA	5.5881666
1093	19	41350615	41350615	G	A	exonic	CYP2A6	NA	synonymous SNV	CYP2A6:NM_000762:exon8:c.C1224T:p.P408P	exonic	ENSG00000255974	NA	synonymous SNV	ENSG00000255974:ENST00000301141:exon8:c.C1224T:p.P408P	NA	NA	19q13.2	NA	NA	NA	NA	rs28399462	0.05	0.05	0.039	0.0573083	0.0219	NA	0.0317	0.1762	0.0102	0.02	NA	0.05	0.15	0.0341	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.464183	NA	NA	0.022558	0.153427	NA	0.051	NA	5.5881086
1093	1	27680292	27680292	A	G	exonic	SYTL1	NA	synonymous SNV	SYTL1:NM_001193308:exon15:c.A1638G:p.E546E,SYTL1:NM_032872:exon15:c.A1602G:p.E534E	exonic	ENSG00000142765	NA	synonymous SNV	ENSG00000142765:ENST00000543823:exon14:c.A1638G:p.E546E,ENSG00000142765:ENST00000318074:exon15:c.A1602G:p.E534E	Score=409;Name=lod=61	NA	1p36.11	Score=737;Name=V$MYOGNF1_01	NA	NA	NA	rs8533	0.54	0.54	0.576	0.546326	0.7247	0.2431	0.4813	0.6891	0.5286	0.71	0.26	0.49	0.63	0.6224	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.787325	NA	NA	0.73186	0.689514	NA	0.507	NA	5.5877066
1093	5	78610361	78610361	C	T	exonic	JMY	NA	synonymous SNV	JMY:NM_152405:exon9:c.C2346T:p.P782P	exonic	ENSG00000152409	NA	synonymous SNV	ENSG00000152409:ENST00000396137:exon9:c.C2346T:p.P782P	NA	NA	5q14.1	NA	NA	NA	NA	rs61751239	0.01	0.01	0.007	0.00938498	0.0298	NA	0.0202	0.0008	0.002	0.03	NA	0.02	0.002	0.0207	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.031343	NA	NA	0.028507	0.004181	NA	NA	NA	5.5876596
1093	14	54418411	54418411	G	A	intronic	BMP4	NA	NA	NA	intronic	ENSG00000125378	NA	NA	NA	NA	NA	14q22.2	NA	Name=TCF4	Name=50	NA	rs2071047	0.41	0.41	0.421	0.410144	0.4125	0.3919	0.3847	0.3888	0.4734	0.41	0.42	0.41	0.39	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.389173	NA	NA	NA	NA	NA	0.428	NA	5.5875
1093	19	51297944	51297944	A	G	intronic	ACPT	NA	NA	NA	intronic	ENSG00000142513	NA	NA	NA	NA	NA	19q13.33	NA	Name=Pol2(b),ZNF263,Pol2-4H8,YY1,NFKB,POU2F2,YY1_(C-20),Pol2,Pol2(phosphoS2),Oct-2,CHD2_(N-1250)	Name=63	NA	rs266123	0.57	0.57	0.55	0.551118	0.4125	0.7986	0.3415	0.6475	0.4571	0.43	0.82	0.38	0.63	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.885522	NA	NA	NA	NA	NA	0.42	NA	5.5875
1093	22	22759044	22759044	T	C	intergenic	LOC96610,ZNF280B	dist=81720;dist=79728	NA	NA	ncRNA_exonic	ENSG00000253818	NA	NA	NA	NA	NA	22q11.22	NA	Name=PU.1,TCF12	Name=2	NA	rs427322	0.4	0.4	0.388	0.431709	0.4125	0.2937	0.5576	0.4584	0.4683	0.41	0.28	0.5	0.45	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.11681	NA	NA	NA	NA	NA	0.406	NA	5.5875
1093	1	43784956	43784956	A	G	exonic	TIE1	NA	synonymous SNV	TIE1:NM_001253357:exon18:c.A2838G:p.L946L,TIE1:NM_005424:exon18:c.A2973G:p.L991L	exonic	ENSG00000066056	NA	synonymous SNV	ENSG00000066056:ENST00000433781:exon13:c.A1908G:p.L636L,ENSG00000066056:ENST00000372476:exon18:c.A2973G:p.L991L	Score=566;Name=lod=267	NA	1p34.2	NA	NA	NA	NA	rs1199039	0.28	0.28	0.265	0.225839	0.3777	0.1478	0.3631	0.1815	0.1125	0.39	0.16	0.37	0.2	0.3112	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.269031	1.269031	NA	0.390698	0.205175	NA	0.348	NA	5.5870686
1093	15	69238445	69238445	G	A	exonic	SPESP1	NA	nonsynonymous SNV	SPESP1:NM_145658:exon2:c.G572A:p.G191E	exonic	ENSG00000258484	NA	nonsynonymous SNV	ENSG00000258484:ENST00000310673:exon2:c.G572A:p.G191E	NA	NA	15q23	NA	NA	NA	NA	rs3743093	0.56	0.56	0.575	0.534545	0.5905	0.4623	0.464	0.6399	0.4591	0.6	0.49	0.48	0.63	0.5491	0.63	1	T	0.0	B	0.0	B	0.647	N	1.000	P	0	N	2.09	T	-0.925	T	0.000	T	0.012	-1.152	0.101	-0.354	-0.586	0.155	1.066	-1.152006	NA	1	0.606794	0.591364	NA	0.572	NA	5.5869394
1093	3	164785196	164785196	C	T	exonic	SI	NA	synonymous SNV	SI:NM_001041:exon6:c.G567A:p.L189L	exonic	ENSG00000090402	NA	synonymous SNV	ENSG00000090402:ENST00000264382:exon6:c.G567A:p.L189L	NA	NA	3q26.1	NA	NA	NA	NA	rs76463353	0.04	0.04	0.051	0.0613019	0.0239	0.0079	0.0288	0.1135	0.1074	0.02	0.01	0.04	0.12	0.0365	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.434309	NA	NA	0.020126	0.098502	NA	0.065	NA	5.5861406
1093	17	51901385	51901385	C	T	exonic	KIF2B	NA	synonymous SNV	KIF2B:NM_032559:exon1:c.C991T:p.L331L	exonic	ENSG00000141200	NA	synonymous SNV	ENSG00000141200:ENST00000268919:exon1:c.C991T:p.L331L	Score=395;Name=lod=54	NA	17q22	NA	NA	NA	NA	rs3803826	0.37	0.37	0.354	0.334465	0.3658	0.5863	0.4107	0.1074	0.2955	0.35	0.61	0.39	0.11	0.3572	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.734769	NA	NA	0.357558	0.148888	NA	0.333	NA	5.5861086
1093	17	74006136	74006136	C	T	exonic	EVPL	NA	synonymous SNV	EVPL:NM_001988:exon22:c.G3150A:p.S1050S	exonic	ENSG00000167880	NA	synonymous SNV	ENSG00000167880:ENST00000301607:exon22:c.G3150A:p.S1050S,ENSG00000167880:ENST00000586740:exon22:c.G3216A:p.S1072S	NA	NA	17q25.1	NA	NA	NA	NA	rs1076871	0.01	0.01	0.019	0.0091853	0.0318	NA	0.0159	0.0008	0.002	0.03	NA	0.01	NA	0.0192	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.505867	NA	NA	0.029767	0.00522	NA	0.065	NA	5.5858996
1093	19	55708475	55708475	G	T	intronic	PTPRH	NA	NA	NA	intronic	ENSG00000080031	NA	NA	NA	NA	NA	19q13.42	NA	Name=ERalpha_a	Name=26	NA	rs2288522	0.11	0.11	0.116	0.111422	0.1491	0.129	0.0591	0.0492	0.1759	0.15	0.13	0.06	0.04	0.1299	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.367389	NA	NA	0.135465	0.061734	NA	0.109	NA	5.585535
1093	5	35904889	35904889	C	A	intronic	CAPSL	NA	NA	NA	intronic	ENSG00000152611	NA	NA	NA	NA	NA	5p13.2	NA	Name=IRF4_(M-17)	Name=7	NA	rs1345827	0.31	0.31	0.308	0.30651	0.4145	0.0724	0.268	0.475	0.2362	0.42	0.06	0.31	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.725477	1.725477	NA	NA	NA	NA	0.312	NA	5.5855
1093	1	14109114	14109114	A	G	exonic	PRDM2	NA	synonymous SNV	PRDM2:NM_001007257:exon3:c.A4221G:p.S1407S,PRDM2:NM_012231:exon8:c.A4824G:p.S1608S,PRDM2:NM_015866:exon8:c.A4824G:p.S1608S	exonic	ENSG00000116731	NA	synonymous SNV	ENSG00000116731:ENST00000413440:exon3:c.A4221G:p.S1407S,ENSG00000116731:ENST00000343137:exon4:c.A4221G:p.S1407S,ENSG00000116731:ENST00000235372:exon8:c.A4824G:p.S1608S,ENSG00000116731:ENST00000311066:exon8:c.A4824G:p.S1608S	Score=397;Name=lod=55	NA	1p36.21	NA	NA	NA	NA	rs1203651	0.36	0.36	0.307	0.365016	0.328	0.3988	0.5418	0.2322	0.4223	0.32	0.43	0.52	0.22	0.3881	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.051567	NA	NA	0.365116	0.263958	NA	0.355	NA	5.5854506
1093	15	63349096	63349096	G	A	intronic	TPM1	NA	NA	NA	UTR5	ENSG00000140416	ENST00000558264:c.-2670G>A	NA	NA	NA	NA	15q22.2	NA	Name=Pol2,Pol2-4H8	Name=49	NA	rs4775613	0.5	0.5	0.483	0.475639	0.5815	0.5496	0.4006	0.3933	0.455	0.57	0.57	0.44	0.35	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.803212	NA	NA	NA	NA	NA	0.464	NA	5.5851667
1094	3	150690566	150690566	T	C	ncRNA_exonic	CLRN1-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000239265	NA	NA	NA	NA	NA	3q25.1	NA	Name=NRSF	Name=6	NA	rs3796240	0.48	0.48	0.451	0.469249	0.5318	0.4365	0.5793	0.3313	0.547	0.53	0.47	0.58	0.35	0.55	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.646494	1.646494	NA	NA	NA	NA	0.435	NA	5.5848666
1094	9	136133699	136133699	C	A	intronic	ABO	NA	NA	NA	ncRNA_intronic	ENSG00000175164	NA	NA	NA	NA	NA	9q34.2	NA	Name=MafK_(SC-477),MafF_(M8194),MafK_(ab50322)	Name=17	NA	rs641959	0.69	0.69	0.682	0.684904	0.7485	0.7034	0.5519	0.6316	0.7669	0.75	0.71	0.61	0.62	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.466275	NA	NA	NA	NA	NA	0.783	NA	5.5848333
1094	8	107782395	107782395	G	A	exonic	ABRA	NA	synonymous SNV	ABRA:NM_139166:exon1:c.C24T:p.S8S	exonic	ENSG00000174429	NA	synonymous SNV	ENSG00000174429:ENST00000311955:exon1:c.C24T:p.S8S	NA	NA	8q23.1	Score=859;Name=V$IRF7_01	NA	NA	NA	rs11996466	0.42	0.42	0.459	0.440895	0.3579	0.5188	0.304	0.5643	0.3763	0.34	0.49	0.32	0.54	0.3728	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.124626	NA	NA	0.35121	0.523842	NA	0.406	NA	5.5847566
1094	2	89185056	89185056	C	G	intergenic	MIR4436A,NONE	dist=73088;dist=NONE	NA	NA	UTR5	ENSG00000211598	ENST00000390243:c.-32C>G	NA	NA	NA	NA	2p11.2	NA	Name=NFKB,Oct-2,Pol2,Pol2-4H8,YY1_(C-20),TAF1,POU2F2	Name=4	NA	rs145064364	0.04	0.04	0.028	0.0621006	0.0895	0.0119	0.0548	0.0045	0.1687	0.09	0.01	0.03	0.0041	0.0767	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.749995	NA	NA	0.082562	0.020955	NA	0.043	NA	5.5845714
1094	9	137775155	137775155	T	C	exonic	FCN2	NA	synonymous SNV	FCN2:NM_015837:exon2:c.T108C:p.R36R,FCN2:NM_004108:exon3:c.T222C:p.R74R	exonic	ENSG00000160339	NA	synonymous SNV	ENSG00000160339:ENST00000350339:exon2:c.T108C:p.R36R,ENSG00000160339:ENST00000291744:exon3:c.T222C:p.R74R	NA	NA	9q34.3	Score=688;Name=V$PPARG_02	NA	NA	NA	rs4520243	0.36	0.36	0.336	0.375399	0.3718	0.4097	0.2997	0.3222	0.4693	0.37	0.42	0.29	0.33	0.3633	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.039976	NA	NA	0.347209	0.342488	NA	0.261	NA	5.5843576
1094	7	97487730	97487730	G	A	intronic	ASNS	NA	NA	NA	intronic	ENSG00000070669	NA	NA	NA	NA	NA	7q21.3	NA	Name=PU.1	Name=3	NA	rs41278830	0.12	0.12	0.108	0.135982	0.1362	0.1002	0.121	0.1112	0.2168	0.14	0.1	0.13	0.11	0.1405	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.480152	NA	NA	0.13907	0.105311	NA	0.152	NA	5.58423
1094	20	41306600	41306600	A	G	exonic	PTPRT	NA	synonymous SNV	PTPRT:NM_007050:exon7:c.T1059C:p.D353D,PTPRT:NM_133170:exon7:c.T1059C:p.D353D	exonic	ENSG00000196090	NA	synonymous SNV	ENSG00000196090:ENST00000356100:exon7:c.T1059C:p.D353D,ENSG00000196090:ENST00000373184:exon7:c.T1059C:p.D353D,ENSG00000196090:ENST00000373187:exon7:c.T1059C:p.D353D,ENSG00000196090:ENST00000373190:exon7:c.T1059C:p.D353D,ENSG00000196090:ENST00000373193:exon7:c.T1059C:p.D353D,ENSG00000196090:ENST00000373198:exon7:c.T1059C:p.D353D,ENSG00000196090:ENST00000373201:exon7:c.T1059C:p.D353D	Score=491;Name=lod=132	NA	20q12	NA	NA	NA	NA	rs2425516	0.4	0.4	0.371	0.384784	0.3529	0.3462	0.4337	0.4599	0.3211	0.38	0.37	0.42	0.48	0.3785	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.034806	NA	NA	0.351306	0.444081	NA	0.297	NA	5.5839606
1094	12	10342356	10342356	A	T	intronic	TMEM52B	NA	NA	NA	intronic	ENSG00000165685	NA	NA	NA	NA	NA	12p13.2	NA	Name=FOXA1_(C-20)	Name=54	NA	rs12306715	0.28	0.28	0.273	0.263179	0.4165	0.1052	0.3732	0.2156	0.2546	0.39	0.12	0.37	0.22	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.581891	NA	NA	NA	NA	NA	0.442	NA	5.5835
1094	17	33787357	33787357	G	C	intergenic	SLFN13,SLFN12L	dist=11501;dist=14585	NA	NA	ncRNA_exonic	ENSG00000267312	NA	NA	NA	Score=595;Name=lod=348	NA	17q12	NA	Name=AP-2gamma	NA	NA	rs7219934	0.4	0.4	0.432	0.365815	0.4165	0.3958	0.3343	0.4402	0.2045	0.39	0.43	0.37	0.41	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.686057	1.686057	NA	NA	NA	NA	0.362	NA	5.5835
1094	4	48178064	48178064	C	A	intronic	TEC	NA	NA	NA	intronic	ENSG00000135605	NA	NA	NA	NA	NA	4p12	NA	Name=p300,CEBPB,c-Fos	Name=39	NA	rs45598338	0.16	0.16	0.144	0.158347	0.1451	0.3482	0.1254	0.0507	0.1452	0.15	0.32	0.08	0.06	0.1362	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.584652	NA	NA	0.135581	0.051294	NA	0.101	NA	5.583119
1094	22	42343091	42343091	G	A	UTR5	CENPM	NM_024053:c.-11C>T,NM_001002876:c.-11C>T	NA	NA	UTR5	ENSG00000100162	ENST00000215980:c.-11C>T,ENST00000407253:c.-11C>T	NA	NA	NA	NA	22q13.2	NA	Name=Pol2-4H8,Sin3Ak-20,HA-E2F1,YY1,USF-1,NFKB,ZEB1_(SC-25388),HEY1,AP-2gamma,USF1_(SC-8983),E2F6,YY1_(C-20),ATF3,Pol2,USF2,POU2F2,E2F4,E2F6_(H-50),TAF1,GATA-1,BHLHE40,Oct-2,ELF1_(SC-631),Max	Name=99	NA	rs6002555	0.39	0.39	0.402	0.450479	0.2147	0.126	0.5202	0.9183	0.3456	0.2	0.14	0.5	0.91	0.3167	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.629202	NA	NA	0.219288	0.814033	NA	0.486	NA	5.5826454
1094	21	45712977	45712977	T	C	exonic	AIRE	NA	synonymous SNV	AIRE:NM_000383:exon10:c.T1197C:p.A399A	exonic	ENSG00000160224	NA	synonymous SNV	ENSG00000160224:ENST00000355347:exon4:c.T576C:p.A192A,ENSG00000160224:ENST00000291582:exon10:c.T1197C:p.A399A	NA	NA	21q22.3	NA	NA	NA	NA	rs1800521	0.35	0.35	0.303	0.35623	0.3579	0.247	0.3184	0.4955	0.3057	0.37	0.24	0.37	0.44	0.378	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.646793	NA	NA	0.34815	0.482428	ID=COSM444569,COSM1483985;OCCURENCE=1(breast)	0.159	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116299.2;CLNDSDB=.;CLNDSDBID=.	5.5826166
1094	6	62390916	62390916	T	C	exonic	KHDRBS2	NA	synonymous SNV	KHDRBS2:NM_152688:exon9:c.A1002G:p.Q334Q	exonic	ENSG00000112232	NA	synonymous SNV	ENSG00000112232:ENST00000281156:exon9:c.A1002G:p.Q334Q	Score=736;Name=lod=1310	NA	6q11.1	Score=744;Name=V$PPARA_01	NA	NA	NA	rs1204114	0.61	0.61	0.6	0.610024	0.7187	0.6974	0.6758	0.3737	0.681	0.72	0.67	0.65	0.33	0.6707	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.00305	NA	NA	0.694767	0.424648	NA	0.638	NA	5.5824996
1094	10	116615045	116615045	T	C	exonic	FAM160B1	NA	synonymous SNV	FAM160B1:NM_001135051:exon14:c.T1893C:p.F631F,FAM160B1:NM_020940:exon14:c.T1893C:p.F631F	exonic	ENSG00000151553	NA	synonymous SNV	ENSG00000151553:ENST00000369248:exon14:c.T1893C:p.F631F,ENSG00000151553:ENST00000369250:exon14:c.T1893C:p.F631F	Score=535;Name=lod=200	NA	10q25.3	NA	NA	NA	NA	rs3180654	0.23	0.23	0.231	0.254593	0.3777	0.0357	0.2032	0.2322	0.4202	0.39	0.04	0.22	0.23	0.3201	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.255425	1.255425	NA	0.386512	0.256015	NA	0.275	NA	5.5823546
1094	19	7570990	7570990	A	G	exonic	C19orf45	NA	synonymous SNV	C19orf45:NM_198534:exon7:c.A1146G:p.R382R	exonic	ENSG00000198723	NA	synonymous SNV	ENSG00000198723:ENST00000361664:exon7:c.A1146G:p.R382R	NA	NA	19p13.2	NA	Name=Egr-1,Pol2-4H8,Sin3Ak-20,USF-1,IRF1,NF-E2,HEY1,AP-2gamma,c-Myc,ATF3,Mxi1_(bHLH),Pol2,USF1_(SC-8983),USF2,Max	NA	NA	rs685048	0.37	0.37	0.345	0.342851	0.3718	0.1736	0.3963	0.4894	0.2515	0.38	0.19	0.43	0.52	0.3429	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.661322	NA	NA	0.37	0.466863	NA	0.42	NA	5.5819666
1094	2	198283305	198283305	T	C	exonic	SF3B1	NA	synonymous SNV	SF3B1:NM_012433:exon5:c.A423G:p.K141K	exonic	ENSG00000115524	NA	synonymous SNV	ENSG00000115524:ENST00000335508:exon5:c.A423G:p.K141K	Score=689;Name=lod=845	NA	2q33.1	Score=891;Name=V$SPZ1_01	NA	NA	NA	rs788023	0.71	0.71	0.756	0.720647	0.7276	0.5179	0.6326	0.8903	0.7556	0.73	0.59	0.64	0.88	0.6725	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.556541	NA	NA	0.684651	0.846119	ID=COSM1129389;OCCURENCE=1(prostate)	0.725	NA	5.5819156
1094	19	49399676	49399676	T	C	intronic	TULP2	NA	NA	NA	intronic	ENSG00000104804	NA	NA	NA	NA	NA	19q13.33	NA	Name=ZBTB7A_(SC-34508),EBF,Egr-1	Name=72	NA	rs73061692	0.06	0.06	0.043	0.0549121	0.1421	0.001	0.0634	0.0098	0.0757	0.14	0.0017	0.07	0.01	0.1122	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.328328	1.328328	NA	0.16407	0.037676	NA	0.123	NA	5.58163
1094	7	150921950	150921950	A	G	exonic	ABCF2	NA	synonymous SNV	ABCF2:NM_005692:exon3:c.T279C:p.L93L,ABCF2:NM_007189:exon3:c.T279C:p.L93L	exonic	ENSG00000033050	NA	synonymous SNV	ENSG00000033050:ENST00000468073:exon2:c.T279C:p.L93L,ENSG00000033050:ENST00000222388:exon3:c.T279C:p.L93L,ENSG00000033050:ENST00000287844:exon3:c.T279C:p.L93L,ENSG00000033050:ENST00000441774:exon3:c.T279C:p.L93L	Score=643;Name=lod=548	NA	7q36.1	Score=770;Name=V$SRF_01	NA	NA	NA	rs6464133	0.77	0.77	0.759	0.739018	0.7008	0.874	0.7839	0.8011	0.5235	0.7	0.88	0.77	0.77	0.7	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.334569	1.334569	NA	0.684302	0.762369	NA	0.761	NA	5.5815646
1094	11	49598207	49598207	T	C	ncRNA_exonic	LOC440040	NA	NA	NA	ncRNA_exonic	ENSG00000205035	NA	NA	NA	Score=710;Name=lod=1025	NA	11p11.12	NA	Name=MafK_(ab50322)	NA	NA	rs3750925	0.46	0.46	0.392	0.445887	0.5517	0.5526	0.5922	0.1853	0.4755	0.54	0.53	0.6	0.16	0.5335	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.107123	NA	0.29	NA	NA	NA	NA	NA	5.5814666
1094	10	28970487	28970487	C	T	intronic	BAMBI	NA	NA	NA	intronic	ENSG00000095739	NA	NA	NA	NA	NA	10p12.1	NA	Name=GATA-2	Name=43	NA	rs56281747	0.19	0.19	0.163	0.18131	0.1213	0.3433	0.2968	0.0469	0.1759	0.13	0.36	0.26	0.05	0.1695	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.259571	NA	NA	0.128023	0.064911	NA	0.101	NA	5.581177
1094	3	149678534	149678534	C	T	exonic	RNF13	NA	synonymous SNV	RNF13:NM_183381:exon10:c.C789T:p.H263H,RNF13:NM_007282:exon11:c.C789T:p.H263H	exonic	ENSG00000082996	NA	synonymous SNV	ENSG00000082996:ENST00000361785:exon7:c.C432T:p.H144H,ENSG00000082996:ENST00000482083:exon7:c.C432T:p.H144H,ENSG00000082996:ENST00000467977:exon8:c.C432T:p.H144H,ENSG00000082996:ENST00000491086:exon9:c.C432T:p.H144H,ENSG00000082996:ENST00000392894:exon10:c.C789T:p.H263H,ENSG00000082996:ENST00000344229:exon11:c.C789T:p.H263H	Score=650;Name=lod=584	NA	3q25.1	Score=978;Name=V$GATA6_01	NA	NA	NA	rs6768054	0.68	0.68	0.641	0.66873	0.7068	0.8661	0.7176	0.4501	0.6871	0.71	0.84	0.69	0.45	0.6937	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.53791	NA	NA	0.685	0.466863	ID=COSM1179812;OCCURENCE=1(prostate)	0.681	NA	5.5811666
1094	7	38796570	38796570	G	A	exonic	VPS41	NA	synonymous SNV	VPS41:NM_080631:exon18:c.C1488T:p.D496D,VPS41:NM_014396:exon19:c.C1563T:p.D521D	exonic	ENSG00000006715	NA	synonymous SNV	ENSG00000006715:ENST00000395969:exon18:c.C1488T:p.D496D,ENSG00000006715:ENST00000310301:exon19:c.C1563T:p.D521D	Score=698;Name=lod=914	NA	7p14.1	NA	NA	NA	NA	rs2240350	0.39	0.39	0.368	0.358227	0.3469	0.4206	0.5965	0.2549	0.2761	0.33	0.45	0.54	0.3	0.3819	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.835814	NA	NA	0.358007	0.290191	NA	0.471	NA	5.5798596
1094	6	35426175	35426175	C	T	exonic	FANCE	NA	synonymous SNV	FANCE:NM_021922:exon5:c.C1071T:p.L357L	exonic	ENSG00000112039	NA	synonymous SNV	ENSG00000112039:ENST00000229769:exon5:c.C1071T:p.L357L	NA	NA	6p21.31	NA	NA	NA	NA	rs3823434	0.06	0.06	0.066	0.0583067	0.0258	0.1687	0.0331	0.0061	0.0665	0.03	0.16	0.04	0.01	0.0383	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.702469	NA	NA	0.022907	0.007944	NA	0.036	NA	5.5796596
1094	19	49385253	49385253	C	G	intronic	TULP2	NA	NA	NA	intronic	ENSG00000104804	NA	NA	NA	NA	NA	19q13.33	NA	Name=c-Myc,SIX5,ERalpha_a,Pol2-4H8,Pol2(b),BAF170,Znf143_(16618-1-AP),ETS1	Name=74	NA	rs1466896	0.06	0.06	0.052	0.0545128	0.1412	0.001	0.0634	0.0083	0.0767	0.14	0.0017	0.08	0.01	0.1107	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.106507	NA	NA	0.168953	0.036541	NA	0.123	NA	5.579147
1094	12	12870695	12870695	T	C	UTR5	CDKN1B	NM_004064:c.-79T>C	NA	NA	UTR5	ENSG00000111276	ENST00000228872:c.-79T>C	NA	NA	NA	Name=Systemic lupus erythematosus	12p13.1	NA	Name=eGFP-JunB	NA	NA	rs34330	0.66	0.66	0.612	0.661741	0.7545	0.5317	0.7824	0.5265	0.7975	0.76	0.5	0.78	0.59	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.301985	1.301985	NA	NA	NA	NA	0.79	NA	5.5788334
1094	17	18880268	18880268	C	A	exonic	SLC5A10	NA	synonymous SNV	SLC5A10:NM_001270648:exon8:c.C867A:p.I289I,SLC5A10:NM_001042450:exon9:c.C948A:p.I316I,SLC5A10:NM_001270649:exon9:c.C948A:p.I316I,SLC5A10:NM_152351:exon9:c.C948A:p.I316I	exonic	ENSG00000154025,ENSG00000188522	NA	synonymous SNV	ENSG00000154025:ENST00000317977:exon8:c.C699A:p.I233I,ENSG00000154025:ENST00000395642:exon8:c.C699A:p.I233I,ENSG00000154025:ENST00000395643:exon8:c.C867A:p.I289I,ENSG00000154025:ENST00000395645:exon9:c.C948A:p.I316I,ENSG00000154025:ENST00000395647:exon9:c.C948A:p.I316I,ENSG00000154025:ENST00000417251:exon9:c.C948A:p.I316I	Score=600;Name=lod=366	NA	17p11.2	NA	NA	NA	NA	rs2472715	0.32	0.32	0.3	0.26877	0.3837	0.3671	0.2781	0.1725	0.1728	0.37	0.34	0.33	0.2	0.327	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.54483	1.54483	NA	0.377442	0.200635	NA	0.297	NA	5.5785246
1094	6	119627976	119627976	G	A	intronic	MAN1A1	NA	NA	NA	intronic	ENSG00000111885	NA	NA	NA	NA	NA	6q22.31	NA	Name=CEBPB,TAL1_(SC-12984)	Name=2	NA	rs6915559	0.32	0.32	0.312	0.292332	0.4215	0.123	0.2795	0.3986	0.1994	0.42	0.12	0.32	0.41	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.065695	NA	NA	NA	NA	NA	0.341	NA	5.5785
1094	10	69773841	69773841	G	A	exonic	HERC4	NA	synonymous SNV	HERC4:NM_015601:exon9:c.C1011T:p.S337S,HERC4:NM_022079:exon9:c.C1011T:p.S337S	exonic	ENSG00000148634	NA	synonymous SNV	ENSG00000148634:ENST00000277817:exon6:c.C681T:p.S227S,ENSG00000148634:ENST00000373700:exon9:c.C1011T:p.S337S,ENSG00000148634:ENST00000395198:exon9:c.C1011T:p.S337S,ENSG00000148634:ENST00000412272:exon9:c.C1011T:p.S337S	Score=600;Name=lod=367	NA	10q21.3	NA	NA	NA	NA	rs866255	0.48	0.48	0.451	0.519369	0.331	0.8413	0.4741	0.4039	0.5695	0.32	0.83	0.43	0.36	0.4282	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.523768	NA	NA	0.32907	0.384476	NA	0.341	NA	5.5783966
1094	7	142460865	142460865	T	C	exonic	PRSS1	NA	synonymous SNV	PRSS1:NM_002769:exon5:c.T738C:p.N246N	exonic	ENSG00000204983	NA	synonymous SNV	ENSG00000204983:ENST00000311737:exon5:c.T738C:p.N246N,ENSG00000204983:ENST00000486171:exon6:c.T780C:p.N260N	Score=374;Name=lod=44	NA	7q34	NA	NA	NA	NA	rs6667	0.46	0.46	0.459	0.39377	0.5845	0.2192	0.5288	0.3956	0.2791	0.59	0.24	0.54	0.43	0.5041	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.274009	NA	NA	NA	NA	NA	0.507	NA	5.5780666
1094	19	10659659	10659659	C	T	exonic	ATG4D	NA	synonymous SNV	ATG4D:NM_032885:exon6:c.C915T:p.P305P	exonic	ENSG00000130734	NA	nonsynonymous SNV	ENSG00000130734:ENST00000588667:exon5:c.C638T:p.P213L,ENSG00000130734:ENST00000588857:exon6:c.C871T:p.R291C	NA	NA	19p13.2	NA	NA	NA	NA	rs2304165	0.12	0.12	0.117	0.130591	0.1541	0.1081	0.0994	0.1097	0.18	0.15	0.09	0.13	0.12	0.1333	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.246918	1.246918	NA	0.134767	0.112801	NA	0.188	NA	5.577833
1094	12	29423460	29423460	G	A	exonic	FAR2	NA	synonymous SNV	FAR2:NM_001271783:exon2:c.G78A:p.L26L,FAR2:NM_018099:exon2:c.G78A:p.L26L	exonic	ENSG00000064763	NA	synonymous SNV	ENSG00000064763:ENST00000552137:exon1:c.G78A:p.L26L,ENSG00000064763:ENST00000182377:exon2:c.G78A:p.L26L,ENSG00000064763:ENST00000536681:exon2:c.G78A:p.L26L	Score=531;Name=lod=192	NA	12p11.22	NA	NA	NA	NA	rs2216854	0.41	0.41	0.419	0.427915	0.3459	0.4058	0.2781	0.6399	0.3548	0.35	0.38	0.28	0.64	0.3643	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.750874	NA	NA	0.379186	0.59714	ID=COSM147460;OCCURENCE=1(stomach)	0.514	NA	5.5772806
1094	5	141243646	141243646	A	G	exonic	PCDH1	NA	synonymous SNV	PCDH1:NM_002587:exon3:c.T2250C:p.A750A,PCDH1:NM_032420:exon3:c.T2250C:p.A750A	exonic	ENSG00000156453	NA	synonymous SNV	ENSG00000156453:ENST00000287008:exon3:c.T2250C:p.A750A,ENSG00000156453:ENST00000357517:exon3:c.T2283C:p.A761A,ENSG00000156453:ENST00000394536:exon3:c.T2250C:p.A750A,ENSG00000156453:ENST00000536585:exon3:c.T2184C:p.A728A,ENSG00000156453:ENST00000456271:exon4:c.T2214C:p.A738A	NA	NA	5q31.3	NA	Name=CTCF	NA	NA	rs3797054	0.37	0.37	0.359	0.420727	0.3469	0.5784	0.3357	0.2935	0.5665	0.32	0.59	0.31	0.25	0.3915	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.033189	NA	NA	0.351047	0.312301	NA	0.377	NA	5.5772196
1094	20	6064710	6064710	A	G	exonic	FERMT1	NA	synonymous SNV	FERMT1:NM_017671:exon13:c.T1695C:p.F565F	exonic	ENSG00000101311	NA	synonymous SNV	ENSG00000101311:ENST00000536936:exon12:c.T924C:p.F308F,ENSG00000101311:ENST00000217289:exon13:c.T1695C:p.F565F	Score=559;Name=lod=249	NA	20p12.3	NA	NA	NA	NA	rs753927	0.44	0.44	0.414	0.395767	0.3588	0.6161	0.4568	0.3079	0.2822	0.35	0.66	0.46	0.31	0.3683	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.559235	1.559235	NA	0.362442	0.35429	NA	0.377	NA	5.5771246
1094	2	162059969	162059969	A	T	intronic	TANK	NA	NA	NA	intronic	ENSG00000136560	NA	NA	NA	Score=623;Name=lod=454	NA	2q24.2	NA	Name=GATA3_(SC-268)	Name=3	NA	rs11884495	0.44	0.44	0.42	0.417133	0.4642	0.4177	0.5548	0.2489	0.498	0.49	0.44	0.53	0.3	0.4743	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.460769	1.460769	NA	0.484651	0.302315	NA	0.391	NA	5.576849
1094	5	180708737	180708737	C	A	intergenic	TRIM52,LOC100133331	dist=20618;dist=41770	NA	NA	ncRNA_intronic	ENSG00000248103	NA	NA	NA	NA	NA	5q35.3	NA	Name=Egr-1,ZBTB7A_(SC-34508)	Name=11	NA	rs2545077	NA	NA	NA	0.47484	0.4235	0.4802	0.4352	0.5408	0.4611	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.140083	NA	NA	NA	NA	NA	NA	NA	5.5765
1094	14	57150174	57150174	C	T	intergenic	TMEM260,OTX2	dist=33942;dist=117251	NA	NA	ncRNA_exonic	ENSG00000242995	NA	NA	NA	Score=690;Name=lod=849	NA	14q22.3	NA	NA	Name=4	NA	rs61995047	0.35	0.35	0.305	0.35024	0.4235	0.379	0.4496	0.1906	0.3906	0.42	0.34	0.45	0.2	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.379361	NA	NA	NA	NA	NA	0.217	NA	5.5765
1094	18	21103971	21103971	T	G	intronic	C18orf8	NA	NA	NA	intronic	ENSG00000141452,ENSG00000141458	NA	NA	NA	NA	NA	18q11.2	NA	Name=JunD	Name=93	NA	rs891386	0.36	0.36	0.318	0.335863	0.4235	0.4167	0.5	0.1006	0.364	0.43	0.43	0.43	0.12	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.182848	NA	NA	NA	NA	NA	0.37	NA	5.5765
1094	3	10059664	10059664	T	C	ncRNA_exonic	CIDECP	NA	NA	NA	ncRNA_exonic	ENSG00000186162	NA	NA	NA	NA	NA	3p25.3	NA	NA	Name=89	NA	rs3209700	0.07	0.07	0.059	0.0716853	0.0905	0.0208	0.0821	0.062	0.1104	0.09	0.03	0.07	0.09	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.681926	NA	NA	NA	NA	NA	0.174	NA	5.5761666
1094	17	62018773	62018773	T	C	exonic	SCN4A	NA	synonymous SNV	SCN4A:NM_000334:exon24:c.A4869G:p.T1623T	exonic	ENSG00000007314	NA	synonymous SNV	ENSG00000007314:ENST00000435607:exon24:c.A4869G:p.T1623T,ENSG00000007314:ENST00000578147:exon24:c.A4869G:p.T1623T	NA	NA	17q23.3	NA	NA	NA	NA	rs2070720	0.43	0.43	0.454	0.41893	0.3678	0.4345	0.3357	0.6218	0.2403	0.38	0.39	0.38	0.61	0.3703	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.82405	NA	NA	0.352948	0.57765	NA	0.449	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000078662.2;CLNDSDB=.;CLNDSDBID=.	5.5756186
1094	22	22989520	22989520	G	T	intronic	GGTLC2	NA	NA	NA	exonic	ENSG00000100121	NA	synonymous SNV	ENSG00000100121:ENST00000448514:exon3:c.G372T:p.V124V	Score=574;Name=lod=286	NA	22q11.22	NA	NA	NA	NA	rs61732073	0.15	0.15	0.075	0.196885	0.0626	0.2192	0.0836	0.2769	0.2843	0.08	0.19	0.08	0.25	0.1276	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.099747	NA	NA	0.06759	0.277349	NA	NA	NA	5.5755433
1094	5	135178124	135178124	T	C	exonic	SLC25A48	NA	synonymous SNV	SLC25A48:NM_145282:exon2:c.T66C:p.V22V	exonic	ENSG00000145832	NA	nonsynonymous SNV	ENSG00000145832:ENST00000462340:exon2:c.T25C:p.W9R	Score=491;Name=lod=132	NA	5q31.1	Score=923;Name=V$TCF11_01	NA	NA	NA	rs2304075	0.75	0.75	0.758	0.743011	0.831	0.7123	0.6628	0.7322	0.7556	0.83	0.66	0.7	0.77	0.7707	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.29796	NA	NA	0.823039	0.776427	NA	0.833	NA	5.575261
1095	2	238257353	238257353	A	G	intronic	COL6A3	NA	NA	NA	intronic	ENSG00000163359	NA	NA	NA	NA	NA	2q37.3	NA	NA	Name=4	NA	rs2646263	0.16	0.16	0.149	0.180711	0.1491	0.0565	0.2133	0.3101	0.1431	0.14	0.05	0.2	0.29	0.1479	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.881728	NA	NA	0.12814	0.275306	NA	0.138	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000080977.1;CLNDSDB=.;CLNDSDBID=.	5.57486
1095	19	11763243	11763243	C	A	intergenic	ZNF627,ZNF833P	dist=33269;dist=21570	NA	NA	ncRNA_exonic	ENSG00000267500	NA	NA	NA	NA	NA	19p13.2	NA	Name=KAP1,SETDB1	Name=2	NA	rs10420009	0.4	0.4	0.399	0.438299	0.4254	0.2252	0.4553	0.5666	0.4857	0.43	0.21	0.44	0.55	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.816465	NA	NA	NA	NA	ID=COSN165734;OCCURENCE=1(breast)	0.529	NA	5.5746
1095	2	132201466	132201466	G	A	ncRNA_exonic	LOC401010	NA	NA	NA	ncRNA_exonic	ENSG00000217950	NA	NA	NA	Score=614;Name=lod=417	NA	2q21.1	NA	NA	NA	NA	rs112041013	0.02	0.02	0.017	0.0169728	0.0577	NA	0.0216	0.0015	0.0102	0.06	NA	0.02	NA	0.0345	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.376363	NA	NA	NA	NA	NA	NA	NA	5.5744666
1095	7	100410597	100410597	G	A	exonic	EPHB4	NA	synonymous SNV	EPHB4:NM_004444:exon12:c.C1890T:p.C630C	exonic	ENSG00000196411	NA	synonymous SNV	ENSG00000196411:ENST00000358173:exon12:c.C1890T:p.C630C,ENSG00000196411:ENST00000360620:exon12:c.C1890T:p.C630C	Score=474;Name=lod=113	NA	7q22.1	NA	NA	NA	NA	rs2230585	0.31	0.31	0.251	0.275559	0.3668	0.3115	0.2867	0.1641	0.2873	0.38	0.34	0.34	0.16	0.3403	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.628991	NA	NA	0.386512	0.209714	NA	0.232	NA	5.5730546
1095	22	26956392	26956392	T	C	intronic	TPST2	NA	NA	NA	intronic	ENSG00000128294	NA	NA	NA	Score=751;Name=lod=1507	NA	22q12.1	NA	NA	Name=4	NA	rs9613209	0.43	0.43	0.406	0.416134	0.4274	0.504	0.464	0.295	0.4438	0.43	0.48	0.49	0.33	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.506467	1.506467	NA	NA	NA	NA	0.304	NA	5.5726
1095	12	48090118	48090118	G	A	exonic	RPAP3	NA	synonymous SNV	RPAP3:NM_001146076:exon4:c.C9T:p.A3A,RPAP3:NM_001146075:exon5:c.C486T:p.A162A,RPAP3:NM_024604:exon5:c.C486T:p.A162A	exonic	ENSG00000005175	NA	synonymous SNV	ENSG00000005175:ENST00000432584:exon4:c.C9T:p.A3A,ENSG00000005175:ENST00000005386:exon5:c.C486T:p.A162A,ENSG00000005175:ENST00000380650:exon5:c.C486T:p.A162A	NA	NA	12q13.11	NA	NA	NA	NA	rs12368459	0.02	0.02	0.012	0.00998403	0.0338	0.001	0.013	NA	0.0061	0.04	0.0017	0.01	NA	0.0246	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.236289	NA	NA	0.036279	0.007036	NA	0.174	NA	5.5719876
1095	17	10542886	10542886	T	C	exonic	MYH3	NA	synonymous SNV	MYH3:NM_002470:exon23:c.A2916G:p.T972T	exonic	ENSG00000109063	NA	synonymous SNV	ENSG00000109063:ENST00000226209:exon22:c.A2916G:p.T972T,ENSG00000109063:ENST00000583535:exon23:c.A2916G:p.T972T	Score=631;Name=lod=491	NA	17p13.1	NA	NA	NA	NA	rs2285472	0.5	0.5	0.486	0.466254	0.7575	0.3839	0.5346	0.2398	0.5092	0.74	0.37	0.52	0.27	0.6085	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.13407	NA	NA	0.728837	0.295506	NA	0.616	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117664.1;CLNDSDB=.;CLNDSDBID=.	5.5718296
1095	14	88477413	88477413	C	T	exonic	GPR65	NA	synonymous SNV	GPR65:NM_003608:exon2:c.C222T:p.T74T	exonic	ENSG00000140030	NA	synonymous SNV	ENSG00000140030:ENST00000267549:exon2:c.C222T:p.T74T	Score=467;Name=lod=105	NA	14q31.3	NA	Name=GATA3_(SC-268)	NA	NA	rs6574978	0.8	0.8	0.808	0.820487	0.6779	0.9831	0.8141	0.7821	0.8558	0.68	0.98	0.81	0.78	0.746	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.290139	NA	NA	0.671047	0.768044	NA	0.877	NA	5.5717196
1095	5	179036268	179036268	A	C	intronic	RUFY1	NA	NA	NA	intronic	ENSG00000176783	NA	NA	NA	NA	NA	5q35.3	NA	Name=Pol2-4H8,ZNF263	Name=61	NA	rs60104959	0.33	0.33	0.315	0.284944	0.4284	0.1726	0.3141	0.3192	0.1861	0.44	0.17	0.34	0.33	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.396081	NA	NA	NA	NA	NA	0.406	NA	5.5716
1095	4	169294859	169294859	C	T	exonic	DDX60L	NA	synonymous SNV	DDX60L:NM_001012967:exon35:c.G4734A:p.G1578G	exonic	ENSG00000181381	NA	synonymous SNV	ENSG00000181381:ENST00000260184:exon35:c.G4734A:p.G1578G,ENSG00000181381:ENST00000511577:exon35:c.G4734A:p.G1578G	NA	NA	4q32.3	NA	NA	NA	NA	rs13133439	0.01	0.01	0.005	0.00878594	0.0298	NA	0.013	0.0008	0.0041	0.03	NA	0.02	0.002	0.0265	0.039	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.194448	NA	NA	0.038775	0.007133	NA	0.022	NA	5.5715916
1095	21	47836426	47836426	T	C	exonic	PCNT	NA	synonymous SNV	PCNT:NM_006031:exon30:c.T6594C:p.G2198G	exonic	ENSG00000160299	NA	synonymous SNV	ENSG00000160299:ENST00000359568:exon30:c.T6594C:p.G2198G	NA	NA	21q22.3	NA	NA	NA	NA	rs57108405	0.12	0.12	0.137	0.155351	0.0239	0.003	0.0634	0.4713	0.0859	0.02	0.0017	0.06	0.45	0.0576	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.219686	NA	NA	0.013605	0.401498	NA	0.109	NA	5.5715616
1095	6	29976024	29976024	C	G	ncRNA_exonic	HLA-J	NA	NA	NA	ncRNA_exonic	ENSG00000204622	NA	NA	NA	Score=378;Name=lod=46	NA	6p22.1	NA	NA	NA	NA	rs3765604	0.18	0.18	0.215	0.191494	0.0954	0.1905	0.1744	0.2988	0.1585	0.09	0.2	0.2	0.3	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.019732	NA	NA	NA	NA	NA	0.159	NA	5.5712666
1095	6	29999534	29999534	A	G	ncRNA_intronic	ZNRD1-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000232757	NA	NA	NA	Score=729;Name=lod=1219	NA	6p22.1	NA	NA	NA	NA	rs4448133	0.18	0.18	0.19	0.191294	0.0954	0.1905	0.1744	0.2988	0.1575	0.09	0.2	0.2	0.3	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.337122	NA	NA	NA	NA	NA	0.167	NA	5.5712666
1095	6	30000280	30000280	C	T	ncRNA_intronic	ZNRD1-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000232757	NA	NA	NA	Score=769;Name=lod=1775	NA	6p22.1	NA	NA	NA	NA	rs9261189	0.18	0.18	0.197	0.191693	0.0954	0.1905	0.1744	0.2995	0.1585	0.09	0.2	0.2	0.3	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.355663	NA	NA	NA	NA	NA	0.167	NA	5.5712666
1095	21	47783655	47783655	C	G	exonic	PCNT	NA	synonymous SNV	PCNT:NM_006031:exon14:c.C2415G:p.A805A	exonic	ENSG00000160299	NA	synonymous SNV	ENSG00000160299:ENST00000359568:exon14:c.C2415G:p.A805A	NA	NA	21q22.3	NA	NA	NA	NA	rs61407822	0.12	0.12	0.134	0.154752	0.0249	0.004	0.062	0.4682	0.0859	0.02	0.0017	0.06	0.44	0.0573	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.60776	NA	NA	0.013605	0.399909	NA	0.145	NA	5.5708616
1095	10	61043244	61043244	G	A	intronic	FAM13C	NA	NA	NA	exonic	ENSG00000148541	NA	synonymous SNV	ENSG00000148541:ENST00000277705:exon6:c.C534T:p.L178L,ENSG00000148541:ENST00000442566:exon6:c.C534T:p.L178L	Score=598;Name=lod=358	NA	10q21.1	NA	NA	NA	NA	rs61738820	0.04	0.04	0.039	0.0295527	0.0944	0.001	0.049	0.0045	0.0123	0.08	0.0017	0.07	0.01	0.0696	0.099	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.027395	NA	NA	0.098721	0.01793	NA	0.029	NA	5.5706123
1095	18	22020543	22020543	C	G	exonic	IMPACT	NA	nonsynonymous SNV	IMPACT:NM_018439:exon6:c.C451G:p.L151V	exonic	ENSG00000154059	NA	nonsynonymous SNV	ENSG00000154059:ENST00000284202:exon6:c.C451G:p.L151V,ENSG00000154059:ENST00000578221:exon6:c.C451G:p.L151V,ENSG00000154059:ENST00000585067:exon6:c.C397G:p.L133V	NA	NA	18q11.2	NA	NA	NA	NA	rs677688	0.87	0.87	0.874	0.871206	0.9374	0.6607	0.9755	0.941	0.8517	0.93	0.67	0.97	0.95	0.9035	0.97	0.38	T	0.0	B	0.0	B	0.453	N	1.000	P	-1.795	N	1.55	T	-1.026	T	0.000	T	0.151	-0.962	0.32	2.38	0.203	0.781	4.381	-0.962303	NA	1	0.921977	0.935089	NA	0.855	NA	5.5704564
1095	6	29975950	29975950	C	T	ncRNA_intronic	HLA-J,ZNRD1-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000204622,ENSG00000204623	NA	NA	NA	NA	NA	6p22.1	NA	Name=USF-1	NA	NA	rs3765606	0.18	0.18	0.198	0.192093	0.0964	0.1915	0.1744	0.2995	0.1585	0.09	0.2	0.2	0.3	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.151669	NA	NA	NA	NA	NA	0.167	NA	5.5702666
1095	19	51630482	51630482	C	A	exonic	SIGLEC9	NA	nonsynonymous SNV	SIGLEC9:NM_001198558:exon4:c.C944A:p.A315E,SIGLEC9:NM_014441:exon4:c.C944A:p.A315E	exonic	ENSG00000129450	NA	nonsynonymous SNV	ENSG00000129450:ENST00000250360:exon4:c.C944A:p.A315E,ENSG00000129450:ENST00000440804:exon4:c.C944A:p.A315E	NA	NA	19q13.41	NA	NA	NA	NA	rs2258983	0.63	0.63	0.639	0.67492	0.5845	0.5744	0.5086	0.913	0.6677	0.58	0.55	0.54	0.88	0.6043	0.88	1	T	0.0	B	0.0	B	0.436	N	1.000	P	-1.795	N	2.5	T	-1.022	T	0.000	T	0.04	-1.957	0.007	-0.399	-0.421	-0.534	3.057	-1.95707	NA	1	0.574419	0.848162	NA	0.761	NA	5.5701144
1095	2	121747429	121747429	A	G	exonic	GLI2	NA	synonymous SNV	GLI2:NM_005270:exon13:c.A3939G:p.P1313P	exonic	ENSG00000074047	NA	synonymous SNV	ENSG00000074047:ENST00000361492:exon13:c.A3939G:p.P1313P,ENSG00000074047:ENST00000452319:exon14:c.A3939G:p.P1313P	NA	NA	2q14.2	Score=768;Name=V$AHR_01	NA	NA	NA	rs10167980	0.56	0.56	0.567	0.51238	0.7286	0.4762	0.5865	0.3593	0.4816	0.72	0.5	0.6	0.37	0.6344	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.114489	NA	NA	0.734008	0.409359	NA	0.457	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000081286.1;CLNDSDB=.;CLNDSDBID=.	5.5696586
1095	9	98908484	98908484	T	C	intergenic	LOC158434,HSD17B3	dist=29791;dist=89105	NA	NA	ncRNA_exonic	ENSG00000224546	NA	NA	NA	Score=726;Name=lod=1187	NA	9q22.32	NA	NA	Name=2	NA	rs4079869	0.44	0.44	0.424	0.496006	0.4304	0.5605	0.3242	0.6218	0.4489	0.4	0.5	0.35	0.53	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.194785	NA	NA	NA	NA	ID=COSN168611;OCCURENCE=1(large_intestine)	0.493	NA	5.5696
1095	17	8076802	8076802	T	A	UTR3	TMEM107	NM_183065:c.*719A>T,NM_032354:c.*719A>T	NA	NA	ncRNA_exonic	ENSG00000200463	NA	NA	NA	Score=487;Name=lod=127	NA	17p13.1	NA	Name=Oct-2,HNF4G_(SC-6558),FOXA1_(SC-101058),ELF1_(SC-631),GR,Max,FOSL1_(SC-183),CEBPB,RXRA,GTF2F1_(RAP-74),CHD2_(N-1250),BATF,p300,BHLHE40,CTCF,HMGN3,ZBTB33,POU2F2,MafK_(SC-477),CTCFL_(SC-98982),GATA-1,TAF1,ETS1,GATA3_(SC-268),MEF2A,IRF4_(M-17),eGFP-JunD,USF1_(SC-8983),TR4,YY1_(C-20),BRCA1_(C-1863),TAF7_(SQ-8),BCLAF1_(M33-P5B11),BCL11A,Pol2(phosphoS2),SMC3_(ab9263),MEF2C_(SC-13268),Pol2,Mxi1_(bHLH),PU.1,NRSF,SP1,SETDB1,SRF,SIX5,MafK_(ab50322),PAX5-C20,PAX5-N19,POU5F1_(SC-9081),ZEB1_(SC-25388),eGFP-GATA2,HEY1,BCL3,NFKB,CCNT2,c-Myc,GATA2_(CG2-96),TBP,THAP1_(SC-98174),GTF2B,USF-1,TCF12,p300_(N-15),FOXA1_(C-20),SIRT6,AP-2alpha,Pol2(b),FOSL2,eGFP-JunB,JunD,HDAC2_(SC-6296),KAP1,ZNF263,E2F1,GATA-2,Pol2-4H8,Sin3Ak-20,Pbx3,c-Jun,STAT3,NANOG_(SC-33759),YY1,Egr-1,GCN5,RFX5_(N-494)	Name=147	NA	rs9901637	0.58	0.58	0.544	0.56869	0.6551	0.4931	0.6715	0.3933	0.7219	0.66	0.54	0.65	0.43	0.6407	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.22247	NA	NA	0.634606	0.476598	NA	0.572	NA	5.569594
1095	11	6048056	6048056	T	C	exonic	OR56A1	NA	synonymous SNV	OR56A1:NM_001001917:exon1:c.A879G:p.A293A	exonic	ENSG00000180934	NA	synonymous SNV	ENSG00000180934:ENST00000316650:exon1:c.A879G:p.A293A	Score=374;Name=lod=44	NA	11p15.4	NA	NA	NA	NA	rs11040335	0.27	0.27	0.261	0.269968	0.3966	0.0516	0.3689	0.2572	0.3119	0.4	0.04	0.38	0.26	0.3297	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.428279	NA	NA	0.370926	0.268741	NA	0.283	NA	5.5694406
1095	3	10089749	10089749	T	C	intronic	FANCD2	NA	NA	NA	intronic	ENSG00000144554	NA	NA	NA	NA	NA	3p25.3	NA	Name=ERalpha_a,GATA3_(SC-268),FOXA1_(C-20),p300	Name=9	NA	rs12330599	NA	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4307	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.768704	1.768704	NA	NA	NA	NA	NA	NA	5.5693
1095	16	81819768	81819768	T	C	exonic	PLCG2	NA	synonymous SNV	PLCG2:NM_002661:exon2:c.T174C:p.A58A	exonic	ENSG00000197943	NA	synonymous SNV	ENSG00000197943:ENST00000359376:exon2:c.T174C:p.A58A,ENSG00000197943:ENST00000565054:exon3:c.T174C:p.A58A	Score=417;Name=lod=66	NA	16q23.3	Score=889;Name=V$GATA1_05	NA	NA	NA	rs1143685	0.75	0.75	0.727	0.733227	0.6859	0.8591	0.7277	0.6422	0.7791	0.69	0.91	0.72	0.66	0.7248	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.829412	1.829412	NA	0.687173	0.629372	NA	0.717	NA	5.5687936
1095	1	228482569	228482569	G	A	exonic	OBSCN	NA	synonymous SNV	OBSCN:NM_001098623:exon43:c.G11484A:p.A3828A,OBSCN:NM_052843:exon43:c.G11484A:p.A3828A,OBSCN:NM_001271223:exon48:c.G12771A:p.A4257A	exonic	ENSG00000154358	NA	synonymous SNV	ENSG00000154358:ENST00000359599:exon32:c.G8025A:p.A2675A,ENSG00000154358:ENST00000284548:exon43:c.G11484A:p.A3828A,ENSG00000154358:ENST00000366707:exon43:c.G2841A:p.A947A,ENSG00000154358:ENST00000366709:exon43:c.G2841A:p.A947A,ENSG00000154358:ENST00000422127:exon43:c.G11484A:p.A3828A,ENSG00000154358:ENST00000570156:exon48:c.G12771A:p.A4257A	NA	NA	1q42.13	NA	NA	NA	NA	rs56122236	0.02	0.02	0.016	0.0127796	0.0447	NA	0.0274	NA	NA	0.04	NA	0.04	NA	0.0211	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.438571	NA	NA	0.032352	0.005295	NA	NA	NA	5.5685146
1095	17	65197158	65197158	A	G	intronic	HELZ	NA	NA	NA	intronic	ENSG00000198265	NA	NA	NA	NA	NA	17q24.2	NA	Name=MafK_(ab50322),c-Myc,CTCF,MafF_(M8194),MafK_(SC-477)	Name=25	NA	rs7218955	0.29	0.29	0.306	0.3127	0.2008	0.1984	0.196	0.6278	0.2025	0.21	0.19	0.17	0.61	0.2307	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.380768	NA	NA	NA	NA	NA	0.29	NA	5.5685
1095	7	66785137	66785137	C	A	ncRNA_exonic	STAG3L4	NA	NA	NA	ncRNA_exonic	ENSG00000106610	NA	NA	NA	Score=501;Name=lod=145	NA	7q11.21	Score=833;Name=V$BACH1_01	NA	NA	NA	rs9443	0.3	0.3	0.286	0.30631	0.3926	0.1071	0.2752	0.388	0.3344	0.38	0.12	0.28	0.41	0.336	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.028301	NA	NA	0.369773	0.353164	NA	0.464	NA	5.5682936
1095	7	143017960	143017960	C	G	intronic	CLCN1	NA	NA	NA	intronic	ENSG00000188037	NA	NA	NA	NA	NA	7q34	NA	Name=STAT1,AP-2alpha,STAT3,AP-2gamma	Name=11	NA	rs7800971	0.4	0.4	0.428	0.414337	0.4324	0.1696	0.3429	0.6573	0.3701	0.43	0.17	0.35	0.66	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.477267	NA	NA	NA	NA	NA	0.42	NA	5.5676
1095	14	65054966	65054966	C	T	exonic	PPP1R36	NA	synonymous SNV	PPP1R36:NM_172365:exon11:c.C1035T:p.A345A	exonic	ENSG00000165807	NA	synonymous SNV	ENSG00000165807:ENST00000298705:exon11:c.C1035T:p.A345A	NA	NA	14q23.3	NA	NA	NA	NA	rs116953714	0.02	0.02	0.018	0.0271565	0.0328	0.001	0.0187	0.0582	0.0123	0.03	0.0017	0.02	0.04	0.0337	0.056	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.171731	NA	NA	0.033256	0.05606	NA	0.007	NA	5.5669106
1095	11	5529139	5529139	T	C	exonic	UBQLN3	NA	synonymous SNV	UBQLN3:NM_017481:exon2:c.A1650G:p.A550A	exonic	ENSG00000175520	NA	synonymous SNV	ENSG00000175520:ENST00000311659:exon2:c.A1650G:p.A550A	NA	NA	11p15.4	Score=827;Name=V$CEBP_C	NA	NA	NA	rs2234456	0.23	0.23	0.195	0.188898	0.3837	0.0526	0.3314	0.0575	0.2055	0.38	0.07	0.34	0.09	0.3154	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.210114	NA	NA	0.400861	0.104498	NA	0.268	NA	5.5667056
1095	6	32975896	32975896	A	G	exonic	HLA-DOA	NA	synonymous SNV	HLA-DOA:NM_002119:exon2:c.T225C:p.G75G	exonic	ENSG00000204252	NA	synonymous SNV	ENSG00000204252:ENST00000229829:exon2:c.T225C:p.G75G,ENSG00000204252:ENST00000450833:exon2:c.T135C:p.G45G	NA	NA	6p21.32	NA	NA	NA	NA	rs364950	0.09	0.09	0.081	0.0800719	0.0408	NA	0.0749	0.233	NA	0.04	NA	0.07	0.3	0.0332	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.105391	NA	NA	0.026024	0.203839	NA	0.08	NA	5.5666426
1095	5	75886168	75886168	A	G	intronic	IQGAP2	NA	NA	NA	intronic	ENSG00000145703	NA	NA	NA	NA	NA	5q13.3	NA	Name=IRF4_(M-17),PU.1,USF2	Name=17	NA	rs2270907	0.45	0.45	0.462	0.521765	0.4334	0.3224	0.5331	0.6233	0.6728	0.44	0.34	0.51	0.57	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.748989	NA	NA	NA	NA	NA	0.529	NA	5.5666
1095	3	123411589	123411589	G	A	exonic	MYLK	NA	synonymous SNV	MYLK:NM_053026:exon18:c.C3351T:p.T1117T,MYLK:NM_053028:exon18:c.C3351T:p.T1117T,MYLK:NM_053025:exon19:c.C3558T:p.T1186T,MYLK:NM_053027:exon19:c.C3558T:p.T1186T	exonic	ENSG00000065534	NA	synonymous SNV	ENSG00000065534:ENST00000475616:exon16:c.C3558T:p.T1186T,ENSG00000065534:ENST00000346322:exon18:c.C3351T:p.T1117T,ENSG00000065534:ENST00000359169:exon19:c.C3558T:p.T1186T,ENSG00000065534:ENST00000360304:exon19:c.C3558T:p.T1186T,ENSG00000065534:ENST00000360772:exon20:c.C3558T:p.T1186T	Score=468;Name=lod=106	NA	3q21.1	Score=802;Name=V$TCF11MAFG_01	NA	NA	NA	rs40305	0.38	0.38	0.368	0.332668	0.7594	0.0685	0.4856	0.0643	0.4202	0.76	0.05	0.52	0.08	0.5783	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.361656	NA	NA	0.762558	0.174535	NA	0.493	NA	5.5664086
1095	1	75037845	75037845	A	G	exonic	C1orf173	NA	synonymous SNV	C1orf173:NM_001002912:exon14:c.T3549C:p.S1183S	exonic	ENSG00000178965	NA	synonymous SNV	ENSG00000178965:ENST00000326665:exon14:c.T3549C:p.S1183S	NA	NA	1p31.1	NA	Name=NRSF	NA	NA	rs12723334	0.39	0.39	0.382	0.3752	0.3549	0.5843	0.3314	0.2466	0.3855	0.36	0.6	0.3	0.25	0.3761	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.059842	NA	NA	0.369419	0.25034	NA	0.355	NA	5.5662476
1095	14	37131993	37131993	G	C	intronic	PAX9	NA	NA	NA	UTR5	ENSG00000198807	ENST00000554201:c.-666G>C	NA	NA	NA	NA	14q13.3	NA	Name=CTCF	Name=34	NA	rs12883298	0.58	0.58	0.564	0.552117	0.6014	0.749	0.4179	0.3986	0.6012	0.59	0.75	0.48	0.43	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.151362	NA	NA	NA	NA	NA	0.609	NA	5.5652667
1096	1	24421804	24421804	A	G	intronic	MYOM3	NA	NA	NA	intronic	ENSG00000142661	NA	NA	NA	NA	NA	1p36.11	NA	Name=SRF	Name=2	NA	rs11249142	0.28	0.28	0.246	0.228035	0.4354	0.3413	0.2118	0.0189	0.1922	0.46	0.31	0.23	0.02	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.083099	NA	NA	NA	NA	NA	0.138	NA	5.5646
1096	20	61439696	61439696	C	G	intronic	OGFR	NA	NA	NA	intronic	ENSG00000060491	NA	NA	NA	NA	NA	20q13.33	NA	Name=SMC3_(ab9263),YY1_(C-20),CTCF,EBF1_(C-8),Rad21	Name=112	NA	rs41282978	0.12	0.12	0.119	0.111222	0.1839	0.004	0.0951	0.152	0.1033	0.18	0.0017	0.11	0.15	0.1162	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.395853	NA	NA	0.135358	0.136013	NA	0.13	NA	5.564542
1096	6	32427841	32427841	G	A	intergenic	HLA-DRA,HLA-DRB5	dist=15015;dist=57313	NA	NA	ncRNA_exonic	ENSG00000196301	NA	NA	NA	NA	NA	6p21.32	NA	Name=c-Myc,Pol2,HA-E2F1	Name=6	NA	rs28732235	0.12	0.12	0.093	0.120208	0.1769	0.0526	0.1138	0.0976	0.1667	0.18	0.05	0.12	0.11	0.1213	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.224779	NA	NA	0.137368	0.094749	NA	0.116	NA	5.564432
1096	1	10238770	10238770	A	G	exonic	UBE4B	NA	synonymous SNV	UBE4B:NM_006048:exon25:c.A3207G:p.T1069T,UBE4B:NM_001105562:exon26:c.A3594G:p.T1198T	exonic	ENSG00000130939	NA	synonymous SNV	ENSG00000130939:ENST00000253251:exon25:c.A3207G:p.T1069T,ENSG00000130939:ENST00000377157:exon25:c.A2859G:p.T953T,ENSG00000130939:ENST00000343090:exon26:c.A3594G:p.T1198T	NA	NA	1p36.22	NA	NA	NA	NA	rs7546642	0.07	0.07	0.068	0.0888578	0.0278	0.001	0.062	0.2118	0.0951	0.03	NA	0.07	0.21	0.0461	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.874465	NA	NA	0.029535	0.157059	NA	0.08	NA	5.5632316
1096	19	39329517	39329517	C	T	intronic	HNRNPL	NA	NA	NA	intronic	ENSG00000104824,ENSG00000268083	NA	NA	NA	NA	NA	19q13.2	NA	Name=CTCF,Rad21,Pol2,Pol2-4H8,STAT3,Pol2(b)	Name=36	NA	rs8111670	0.15	0.15	0.166	0.211262	0.1342	0.1349	0.1268	0.2859	0.3282	0.13	0.1	0.12	0.26	0.1699	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.663551	NA	NA	0.132907	0.274172	NA	0.246	NA	5.562993
1096	15	64263532	64263532	C	A	intronic	DAPK2	NA	NA	NA	intronic	ENSG00000035664	NA	NA	NA	NA	NA	15q22.31	NA	Name=BCL11A,Pol2,EBF,Egr-1	Name=14	NA	rs6494457	0.27	0.27	0.229	0.249201	0.4374	0.0109	0.4207	0.208	0.2352	0.42	0.01	0.41	0.24	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.071337	NA	NA	NA	NA	NA	0.297	NA	5.5626
1096	17	79479469	79479469	A	C	intronic	ACTG1	NA	NA	NA	UTR5	ENSG00000184009	ENST00000575842:c.-89T>G	NA	NA	NA	NA	17q25.3	NA	Name=HEY1,Pol2-4H8,Pbx3,JunD,Pol2,TAF7_(SQ-8),GABP	Name=20	NA	rs8064532	0.41	0.41	0.449	0.406749	0.6044	0.0466	0.4452	0.5076	0.411	0.6	0.05	0.52	0.47	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.261664	NA	NA	NA	NA	NA	0.297	NA	5.5622667
1096	1	22216574	22216574	C	A	exonic	HSPG2	NA	synonymous SNV	HSPG2:NM_005529:exon6:c.G474T:p.G158G	exonic	ENSG00000142798	NA	nonsynonymous SNV	ENSG00000142798:ENST00000412328:exon3:c.G242T:p.G81V	NA	NA	1p36.12	NA	NA	NA	NA	rs2254358	0.45	0.45	0.462	0.444489	0.6839	0.3522	0.4164	0.2163	0.6217	0.67	0.35	0.45	0.24	0.5769	0.68	0.24	T	0.617	P	0.226	B	0.043	N	0.998	P	.	.	0.39	T	-0.960	T	0.000	T	.	1.117	9.554	0.36	0.199	-0.631	3.784	1.116592	NA	0.44	0.676977	0.302996	NA	0.457	NA	5.562223
1096	17	37822311	37822311	A	C	exonic	TCAP	NA	synonymous SNV	TCAP:NM_003673:exon2:c.A453C:p.A151A	exonic	ENSG00000173991	NA	synonymous SNV	ENSG00000173991:ENST00000309889:exon2:c.A453C:p.A151A,ENSG00000173991:ENST00000578283:exon3:c.A381C:p.A127A	Score=259;Name=lod=15	NA	17q12	NA	NA	NA	NA	rs1053651	0.57	0.57	0.581	0.54972	0.7217	0.4167	0.5591	0.4191	0.68	0.72	0.49	0.58	0.44	0.6706	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.462153	NA	NA	0.712174	0.434941	ID=COSM436493;OCCURENCE=1(breast)	0.572	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=mult|single;CLNACC=RCV000037796.3|RCV000128377.1;CLNDSDB=.|.;CLNDSDBID=.|.	5.5621926
1096	22	43088971	43088971	C	T	exonic	A4GALT	NA	synonymous SNV	A4GALT:NM_017436:exon3:c.G987A:p.T329T	exonic	ENSG00000128274	NA	synonymous SNV	ENSG00000128274:ENST00000249005:exon2:c.G987A:p.T329T,ENSG00000128274:ENST00000381278:exon2:c.G987A:p.T329T,ENSG00000128274:ENST00000401850:exon2:c.G987A:p.T329T	Score=333;Name=lod=30	NA	22q13.2	NA	NA	NA	NA	rs9623659	0.33	0.33	0.347	0.349042	0.3817	0.1319	0.3415	0.503	0.3364	0.37	0.13	0.4	0.47	0.3524	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.40313	NA	NA	0.370814	0.46936	NA	0.428	NA	5.5617526
1096	6	76545684	76545684	T	C	intronic	MYO6	NA	NA	NA	intronic	ENSG00000196586	NA	NA	NA	Score=582;Name=lod=310	NA	6q14.1	NA	NA	NA	NA	rs12210963	0.11	0.11	0.109	0.102636	0.165	0.0387	0.1023	0.1104	0.0941	0.16	0.04	0.12	0.1	0.1215	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.722823	NA	NA	0.152128	0.110758	NA	0.225	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000038313.1;CLNDSDB=.;CLNDSDBID=.	5.561372
1096	1	19440107	19440107	A	G	intronic	UBR4	NA	NA	NA	UTR3	ENSG00000127481	ENST00000375218:c.*266T>C	NA	NA	NA	NA	1p36.13	NA	Name=TAL1_(SC-12984),GABP,GATA2_(CG2-96),Pol2-4H8,GATA-2,eGFP-JunD	Name=3	NA	rs9661719	0.72	0.72	0.708	0.712859	0.6054	0.8105	0.7334	0.8215	0.5613	0.6	0.82	0.71	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.589845	NA	NA	NA	NA	NA	0.63	NA	5.5612667
1096	12	121454342	121454342	T	A	upstream	C12orf43	NA	NA	NA	upstream	ENSG00000157895	NA	NA	NA	NA	NA	12q24.31	NA	Name=GTF2F1_(RAP-74),CHD2_(N-1250),ELF1_(SC-631),Max,Oct-2,TCF4,Pol2,Mxi1_(bHLH),GATA3_(SC-268),USF1_(SC-8983),eGFP-JunD,BRCA1_(C-1863),YY1_(C-20),Znf143_(16618-1-AP),GATA-1,TAF1,ETS1,USF2,E2F4,POU2F2,USF-1,IRF1,TBP,NFKB,HEY1,ZEB1_(SC-25388),c-Myc,SIX5,PAX5-C20,YY1,RFX5_(N-494),ZNF263,Pol2-4H8,ERalpha_a,GATA-2,HA-E2F1,eGFP-JunB,JunD,Pol2(b)	Name=148	NA	rs73214155	0.1	0.1	0.073	0.091254	0.1054	0.001	0.2997	0.0628	0.0603	0.11	NA	0.26	0.09	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.098791	NA	NA	NA	NA	NA	0.138	NA	5.5612666
1096	2	233925406	233925406	T	G	intronic	INPP5D	NA	NA	NA	intronic	ENSG00000168918	NA	NA	NA	NA	NA	2q37.1	Score=881;Name=V$CREBP1_01	Name=HNF4A,HDAC2_(SC-6296)	NA	NA	rs34218488	0.43	0.43	0.412	0.40655	0.4394	0.6042	0.4582	0.2027	0.408	0.44	0.58	0.43	0.23	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.408807	NA	NA	NA	NA	NA	0.377	NA	5.5606
1096	4	1729347	1729347	A	G	intronic	TACC3	NA	NA	NA	intronic	ENSG00000013810	NA	NA	NA	NA	NA	4p16.3	NA	Name=c-Fos,c-Jun,STAT3,GABP,JunD,STAT1	Name=115	NA	rs1793997	0.32	0.32	0.015	0.309505	0.4394	0.1597	0.3199	0.3359	0.2873	0.43	0.18	0.31	0.29	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.847019	NA	NA	NA	NA	NA	NA	NA	5.5606
1096	4	1729348	1729348	T	A	intronic	TACC3	NA	NA	NA	intronic	ENSG00000013810	NA	NA	NA	NA	NA	4p16.3	NA	Name=STAT1,JunD,GABP,STAT3,c-Fos,c-Jun	Name=115	NA	rs2854908	0.31	0.31	NA	0.309505	0.4394	0.1597	0.3199	0.3359	0.2873	0.43	0.18	0.31	0.29	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.546934	NA	NA	NA	NA	NA	NA	NA	5.5606
1096	10	101802262	101802262	G	A	exonic	CPN1	NA	synonymous SNV	CPN1:NM_001308:exon9:c.C1299T:p.H433H	exonic	ENSG00000120054	NA	synonymous SNV	ENSG00000120054:ENST00000370418:exon9:c.C1299T:p.H433H	NA	NA	10q24.2	NA	NA	NA	NA	rs61733667	0.03	0.03	0.022	0.0225639	0.0338	0.0238	0.0663	0.0023	0.0061	0.03	0.03	0.07	0.002	0.0346	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.307614	NA	NA	0.038023	0.007717	NA	0.022	NA	5.5602436
1096	14	106866588	106866588	T	C	intergenic	LINC00226,LINC00221	dist=121622;dist=71867	NA	NA	exonic	ENSG00000211958	NA	nonsynonymous SNV	ENSG00000211958:ENST00000390618:exon2:c.A166G:p.I56V	Score=481;Name=lod=120	NA	14q32.33	NA	NA	NA	NA	rs73379082	NA	NA	0.212	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.1746	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-3.122509	NA	1	0.098494	0.353377	NA	0.123	NA	5.5602394
1096	2	233791648	233791648	G	T	intronic	NGEF	NA	NA	NA	intronic	ENSG00000066248	NA	NA	NA	NA	NA	2q37.1	NA	Name=SUZ12	Name=4	NA	rs2592127	0.4	0.4	0.374	0.358427	0.4404	0.3383	0.4697	0.3419	0.2382	0.43	0.37	0.46	0.34	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.792099	NA	NA	NA	NA	NA	0.254	NA	5.5596
1096	3	149192676	149192676	G	A	exonic	TM4SF4	NA	synonymous SNV	TM4SF4:NM_004617:exon1:c.G12A:p.G4G	exonic	ENSG00000169903	NA	synonymous SNV	ENSG00000169903:ENST00000305354:exon1:c.G12A:p.G4G,ENSG00000169903:ENST00000465758:exon1:c.G12A:p.G4G	NA	NA	3q25.1	Score=866;Name=V$SPZ1_01	NA	NA	NA	rs12488126	0.22	0.22	0.177	0.188698	0.4066	0.0208	0.3602	0.0514	0.2014	0.39	0.02	0.39	0.06	0.3106	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.406518	NA	NA	0.38991	0.098912	NA	0.261	NA	5.5595566
1096	6	84894942	84894942	C	T	exonic	KIAA1009	NA	synonymous SNV	KIAA1009:NM_014895:exon13:c.G1626A:p.L542L	exonic	ENSG00000135315	NA	synonymous SNV	ENSG00000135315:ENST00000257766:exon13:c.G1398A:p.L466L,ENSG00000135315:ENST00000403245:exon13:c.G1626A:p.L542L	NA	NA	6q14.2	NA	NA	NA	NA	rs41271605	0.02	0.02	0.015	0.0117812	0.0348	0.001	0.0245	0.0015	0.0041	0.03	0.0017	0.02	0.0041	0.0285	0.044	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.340691	NA	NA	0.044419	0.006582	NA	0.014	NA	5.5589476
1096	1	59147926	59147926	T	C	exonic	MYSM1	NA	nonsynonymous SNV	MYSM1:NM_001085487:exon8:c.A790G:p.T264A	exonic	ENSG00000162601	NA	nonsynonymous SNV	ENSG00000162601:ENST00000472487:exon8:c.A790G:p.T264A	NA	NA	1p32.1	NA	NA	NA	NA	rs12139511	0.61	0.61	0.607	0.631989	0.5875	0.629	0.6643	0.6589	0.6217	0.58	0.62	0.66	0.61	0.6078	0.66	0.8	T	0.0	B	0.0	B	0.933	N	1.000	P	-0.695	N	2.01	T	-0.946	T	0.000	T	0.008	-2.129	0.005	0.948	0.077	0.198	0.666	-2.129199	NA	NA	0.579276	0.620219	NA	0.594	NA	5.5587574
1096	4	140809656	140809656	C	A	intronic	MAML3	NA	NA	NA	intronic	ENSG00000196782	NA	NA	NA	NA	NA	4q31.1	NA	Name=p300	Name=40	NA	rs6839194	0.33	0.33	0.296	0.299321	0.4423	0.122	0.3141	0.3396	0.2699	0.46	0.14	0.35	0.32	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.219844	NA	NA	NA	NA	NA	0.275	NA	5.5577
1096	8	6378763	6378763	C	T	exonic	ANGPT2	NA	synonymous SNV	ANGPT2:NM_001118888:exon3:c.G579A:p.Q193Q,ANGPT2:NM_001118887:exon4:c.G735A:p.Q245Q,ANGPT2:NM_001147:exon4:c.G735A:p.Q245Q	exonic	ENSG00000091879	NA	synonymous SNV	ENSG00000091879:ENST00000338312:exon3:c.G579A:p.Q193Q,ENSG00000091879:ENST00000325203:exon4:c.G735A:p.Q245Q,ENSG00000091879:ENST00000415216:exon4:c.G735A:p.Q245Q,ENSG00000091879:ENST00000523120:exon4:c.G735A:p.Q245Q	Score=393;Name=lod=53	NA	8p23.1	NA	NA	NA	NA	rs3020221	0.3	0.3	0.312	0.309704	0.3837	0.2331	0.2767	0.3139	0.3303	0.38	0.21	0.3	0.3	0.3449	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.244294	NA	NA	0.380698	0.335225	NA	0.326	NA	5.5573686
1096	13	21562371	21562371	C	T	exonic	LATS2	NA	synonymous SNV	LATS2:NM_014572:exon4:c.G1548A:p.P516P	exonic	ENSG00000150457	NA	synonymous SNV	ENSG00000150457:ENST00000382592:exon4:c.G1548A:p.P516P,ENSG00000150457:ENST00000542899:exon4:c.G1548A:p.P516P	NA	NA	13q12.11	NA	NA	NA	NA	rs59928188	0.05	0.05	0.04	0.04373	0.0358	0.0665	0.0331	0.0605	0.0133	0.04	0.05	0.04	0.07	0.0379	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.185613	NA	NA	0.035955	0.0495	NA	NA	NA	5.5570116
1096	3	41949301	41949301	T	C	intronic	ULK4	NA	NA	NA	intronic	ENSG00000168038	NA	NA	NA	NA	NA	3p22.1	NA	Name=BATF,c-Fos	Name=52	NA	rs59146151	0.09	0.09	0.089	0.0840655	0.166	0.002	0.0908	0.0635	0.1074	0.18	0.0035	0.09	0.06	0.1276	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.720356	NA	NA	0.150135	0.076164	NA	0.13	NA	5.556265
1096	11	47469439	47469439	A	G	exonic	RAPSN	NA	synonymous SNV	RAPSN:NM_005055:exon2:c.T456C:p.Y152Y,RAPSN:NM_032645:exon2:c.T456C:p.Y152Y	exonic	ENSG00000165917	NA	synonymous SNV	ENSG00000165917:ENST00000298854:exon2:c.T456C:p.Y152Y,ENSG00000165917:ENST00000352508:exon2:c.T456C:p.Y152Y,ENSG00000165917:ENST00000524487:exon2:c.T456C:p.Y152Y,ENSG00000165917:ENST00000529341:exon2:c.T456C:p.Y152Y	Score=707;Name=lod=992	NA	11p11.2	NA	NA	NA	NA	rs7111873	0.61	0.61	0.597	0.625599	0.7068	0.6587	0.6902	0.3472	0.8384	0.71	0.65	0.67	0.38	0.6847	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.786965	NA	NA	0.719106	0.426851	NA	0.703	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118119.2;CLNDSDB=.;CLNDSDBID=.	5.5560606
1096	6	152782933	152782933	G	A	intronic	SYNE1	NA	NA	NA	intronic	ENSG00000131018	NA	NA	NA	NA	NA	6q25.2	NA	Name=c-Jun,c-Fos,GATA-2	Name=38	NA	rs579464	0.58	0.58	0.612	0.602436	0.4443	0.747	0.3775	0.7927	0.5184	0.43	0.74	0.4	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.636353	NA	NA	NA	NA	NA	0.587	NA	5.5557
1096	9	138586940	138586940	C	A	exonic	SOHLH1	NA	synonymous SNV	SOHLH1:NM_001012415:exon6:c.G831T:p.L277L,SOHLH1:NM_001101677:exon6:c.G831T:p.L277L	exonic	ENSG00000165643	NA	synonymous SNV	ENSG00000165643:ENST00000298466:exon6:c.G831T:p.L277L,ENSG00000165643:ENST00000425225:exon6:c.G831T:p.L277L	NA	NA	9q34.3	NA	NA	NA	NA	rs55674357	0.02	0.02	0.014	0.0119808	0.0447	NA	0.0101	0.0015	0.0061	0.04	NA	0.01	0.0041	0.0389	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.257013	NA	NA	0.027633	0.00627	NA	0.022	NA	5.5554336
1096	1	1333598	1333598	C	A	intronic	CCNL2	NA	NA	NA	intronic	ENSG00000221978	NA	NA	NA	NA	NA	1p36.33	NA	Name=Sin3Ak-20,Pol2,STAT3,SRF,TAL1_(SC-12984),c-Myc	Name=90	NA	rs35242196	0.33	0.33	0.286	0.370607	0.0924	0.869	0.3646	0.1203	0.4857	0.09	0.87	0.27	0.12	0.2428	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.515047	NA	NA	0.109767	0.123241	NA	0.203	NA	5.555033
1097	7	44005513	44005513	G	A	ncRNA_exonic	POLR2J4	NA	NA	NA	ncRNA_exonic	ENSG00000214783,ENSG00000241057	NA	NA	NA	Score=429;Name=lod=74	NA	7p13	NA	NA	NA	NA	rs2595699	0.09	0.09	0.078	0.0688898	0.0606	0.1171	0.072	0.0855	0.0031	0.05	0.12	0.08	0.1	0.0519	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.076111	NA	NA	NA	NA	NA	NA	NA	5.5541666
1097	6	32427871	32427871	A	G	intergenic	HLA-DRA,HLA-DRB5	dist=15045;dist=57283	NA	NA	ncRNA_intronic	ENSG00000196301	NA	NA	NA	NA	NA	6p21.32	NA	Name=c-Myc,Pol2,HA-E2F1	Name=6	NA	rs17209105	0.12	0.12	0.086	0.121006	0.1789	0.0526	0.1138	0.0976	0.1687	0.18	0.05	0.12	0.11	0.1257	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.342739	NA	NA	0.141386	0.09532	NA	0.13	NA	5.554014
1097	11	64108262	64108262	T	G	intronic	CCDC88B	NA	NA	NA	intronic	ENSG00000168071	NA	NA	NA	NA	NA	11q13.1	NA	Name=Pol2,HMGN3,EBF1_(C-8),ELF1_(SC-631),Pol2-4H8	Name=23	NA	rs71456309	0.11	0.11	0.108	0.104832	0.159	0.1071	0.1225	0.0227	0.1452	0.16	0.11	0.13	0.02	0.136	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.107817	NA	NA	0.151023	0.047266	NA	0.051	NA	5.553977
1097	9	100201551	100201551	A	G	exonic	TDRD7	NA	synonymous SNV	TDRD7:NM_014290:exon5:c.A588G:p.Q196Q	exonic	ENSG00000196116	NA	synonymous SNV	ENSG00000196116:ENST00000422139:exon4:c.A366G:p.Q122Q,ENSG00000196116:ENST00000355295:exon5:c.A588G:p.Q196Q	NA	NA	9q22.33	NA	NA	NA	NA	rs7853578	0.07	0.07	0.07	0.0916534	0.0278	0.1052	0.0303	0.174	0.0757	0.03	0.08	0.02	0.17	0.0541	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.356889	NA	NA	0.030814	0.157512	NA	0.051	NA	5.5539526
1097	3	98541116	98541116	G	A	exonic	DCBLD2	NA	synonymous SNV	DCBLD2:NM_080927:exon6:c.C786T:p.I262I	exonic	ENSG00000057019	NA	synonymous SNV	ENSG00000057019:ENST00000326840:exon6:c.C786T:p.I262I,ENSG00000057019:ENST00000326857:exon6:c.C786T:p.I262I	Score=522;Name=lod=176	NA	3q12.1	NA	NA	NA	NA	rs828616	0.41	0.41	0.345	0.385982	0.3757	0.6806	0.5115	0.0772	0.4213	0.36	0.69	0.51	0.1	0.3859	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.266153	1.266153	NA	0.351198	0.115163	NA	0.254	NA	5.5538686
1097	16	74372357	74372357	C	T	ncRNA_exonic	LOC283922	NA	NA	NA	ncRNA_exonic	ENSG00000214331	NA	NA	NA	Score=674;Name=lod=734	NA	16q23.1	NA	NA	NA	NA	rs112549981	NA	NA	0.053	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.1132	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.116163	2.116163	NA	NA	NA	NA	NA	NA	5.5534666
1097	8	141566311	141566311	C	T	exonic	AGO2	NA	synonymous SNV	AGO2:NM_001164623:exon9:c.G1101A:p.A367A,AGO2:NM_012154:exon9:c.G1101A:p.A367A	exonic	ENSG00000123908	NA	synonymous SNV	ENSG00000123908:ENST00000220592:exon9:c.G1101A:p.A367A,ENSG00000123908:ENST00000519980:exon9:c.G1101A:p.A367A	Score=560;Name=lod=252	NA	8q24.3	NA	NA	NA	NA	rs2271738	0.44	0.44	0.396	0.449281	0.332	0.6389	0.5807	0.2897	0.4969	0.33	0.64	0.51	0.3	0.4103	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.503544	1.503544	NA	0.371047	0.301634	NA	0.442	NA	5.5533196
1097	1	176918504	176918504	A	G	intronic	ASTN1	NA	NA	NA	intronic	ENSG00000152092	NA	NA	NA	Score=455;Name=lod=94	NA	1q25.2	NA	Name=CTCF	NA	NA	rs2076073	0.18	0.18	0.18	0.190695	0.1272	0.1885	0.2536	0.2655	0.1125	0.13	0.17	0.22	0.25	0.1734	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.435774	NA	NA	0.146279	0.257149	NA	0.13	NA	5.553121
1097	6	33240506	33240506	A	G	intronic	RPS18	NA	NA	NA	intronic	ENSG00000231500	NA	NA	NA	Score=653;Name=lod=602	NA	6p21.32	NA	Name=CTCF_(SC-5916)	NA	NA	rs464921	0.11	0.11	0.093	0.117612	0.1541	0.0883	0.134	0.0356	0.2096	0.15	0.1	0.14	0.03	0.1381	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.723907	1.723907	NA	0.154884	0.062642	NA	0.087	NA	5.552916
1097	2	74756176	74756176	G	C	intronic	AUP1	NA	NA	NA	intronic	ENSG00000115307	NA	NA	NA	NA	NA	2p13.1	NA	Name=CTCF,CTCF_(C-20),ZNF263	NA	NA	rs2231250	0.47	0.47	0.477	0.5	0.169	0.8304	0.3646	0.6891	0.3405	0.16	0.83	0.3	0.68	0.2783	0.83	0.24	T	.	.	.	.	0.270	N	1.000	P	.	.	.	.	-1.044	T	0.000	T	.	1.555	11.15	1.26	0.139	0.817	5.473	1.555375	1.555375	0.51	NA	NA	NA	0.37	NA	5.5527
1097	17	38178149	38178149	A	G	intronic	MED24	NA	NA	NA	intronic	ENSG00000008838	NA	NA	NA	NA	NA	17q21.1	NA	Name=Pol2,GR,AP-2gamma	Name=104	NA	rs2302776	0.44	0.44	0.404	0.44988	0.4473	0.4464	0.4827	0.4281	0.4622	0.42	0.44	0.5	0.43	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.14955	NA	NA	NA	NA	NA	0.435	NA	5.5527
1097	21	46057391	46057391	A	G	exonic	KRTAP10-10	NA	synonymous SNV	KRTAP10-10:NM_181688:exon1:c.A57G:p.V19V	exonic	ENSG00000221859	NA	synonymous SNV	ENSG00000221859:ENST00000380095:exon1:c.A57G:p.V19V	Score=475;Name=lod=114	NA	21q22.3	NA	NA	NA	NA	rs9306108	0.34	0.34	0.294	0.38738	0.3827	0.3115	0.2651	0.3775	0.5706	0.39	0.3	0.29	0.37	0.3867	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.846677	NA	NA	0.344767	0.339764	NA	NA	NA	5.5524996
1097	2	112142170	112142170	G	C	ncRNA_intronic	LOC541471	NA	NA	NA	ncRNA_exonic	ENSG00000223973	NA	NA	NA	Score=843;Name=lod=3545	NA	2q13	NA	NA	NA	NA	rs62163547	0.14	0.14	0.13	0.131989	0.1143	0.001	0.0807	0.3351	0.047	0.12	0.0017	0.11	0.34	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.859812	1.859812	NA	NA	NA	NA	0.014	NA	5.5523666
1097	17	76803263	76803263	G	A	exonic	USP36	NA	synonymous SNV	USP36:NM_025090:exon14:c.C1863T:p.S621S	exonic	ENSG00000055483	NA	synonymous SNV	ENSG00000055483:ENST00000449938:exon8:c.C963T:p.S321S,ENSG00000055483:ENST00000312010:exon14:c.C1863T:p.S621S,ENSG00000055483:ENST00000542802:exon14:c.C1863T:p.S621S,ENSG00000055483:ENST00000588086:exon14:c.C1863T:p.S621S,ENSG00000055483:ENST00000589225:exon14:c.C1863T:p.S621S	NA	NA	17q25.3	NA	NA	NA	NA	rs35820493	0.02	0.02	0.013	0.0125799	0.0427	0.001	0.0144	NA	0.0092	0.05	0.0017	0.02	NA	0.0325	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.541098	NA	NA	0.039302	0.007263	NA	0.007	NA	5.5521646
1097	6	38771106	38771106	G	A	intronic	DNAH8	NA	NA	NA	intronic	ENSG00000124721	NA	NA	NA	NA	NA	6p21.2	NA	Name=p300,FOXA1_(C-20),ERalpha_a,GATA3_(SC-268)	Name=5	NA	rs56247993	0.15	0.15	0.123	0.130791	0.1412	0.127	0.2464	0.093	0.093	0.15	0.13	0.22	0.11	0.1519	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.285127	NA	NA	0.154767	0.095778	NA	0.21	NA	5.552133
1097	8	144999621	144999621	C	T	exonic	PLEC	NA	synonymous SNV	PLEC:NM_201378:exon31:c.G4434A:p.A1478A,PLEC:NM_201379:exon31:c.G4410A:p.A1470A,PLEC:NM_201380:exon31:c.G4887A:p.A1629A,PLEC:NM_201381:exon31:c.G4380A:p.A1460A,PLEC:NM_201382:exon31:c.G4476A:p.A1492A,PLEC:NM_201383:exon31:c.G4488A:p.A1496A,PLEC:NM_201384:exon31:c.G4476A:p.A1492A,PLEC:NM_000445:exon32:c.G4557A:p.A1519A	exonic	ENSG00000178209	NA	synonymous SNV	ENSG00000178209:ENST00000322810:exon31:c.G4887A:p.A1629A,ENSG00000178209:ENST00000345136:exon31:c.G4476A:p.A1492A,ENSG00000178209:ENST00000354589:exon31:c.G4476A:p.A1492A,ENSG00000178209:ENST00000354958:exon31:c.G4410A:p.A1470A,ENSG00000178209:ENST00000356346:exon31:c.G4434A:p.A1478A,ENSG00000178209:ENST00000357649:exon31:c.G4488A:p.A1496A,ENSG00000178209:ENST00000398774:exon31:c.G4380A:p.A1460A,ENSG00000178209:ENST00000527096:exon31:c.G4545A:p.A1515A,ENSG00000178209:ENST00000436759:exon32:c.G4557A:p.A1519A	NA	NA	8q24.3	NA	NA	NA	NA	rs55646585	0.23	0.23	0.208	0.22484	0.4205	0.125	0.2896	0.028	0.3466	0.41	0.13	0.29	0.03	0.3295	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.315447	NA	NA	0.36517	0.08539	NA	0.159	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000078867.3;CLNDSDB=.;CLNDSDBID=.	5.5514966
1097	14	106877912	106877912	G	C	intergenic	LINC00226,LINC00221	dist=132946;dist=60543	NA	NA	exonic	ENSG00000211959	NA	nonsynonymous SNV	ENSG00000211959:ENST00000390619:exon2:c.C82G:p.L28V	Score=399;Name=lod=56	NA	14q32.33	NA	NA	NA	NA	rs74093494	0.25	0.25	0.179	NA	NA	NA	NA	NA	NA	0.25	0.14	0.22	0.41	0.2821	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-3.387161	NA	NA	NA	NA	NA	NA	NA	5.5512334
1097	1	228402508	228402508	C	T	exonic	OBSCN	NA	synonymous SNV	OBSCN:NM_001098623:exon5:c.C1537T:p.L513L,OBSCN:NM_001271223:exon5:c.C1537T:p.L513L,OBSCN:NM_052843:exon5:c.C1537T:p.L513L	exonic	ENSG00000154358	NA	synonymous SNV	ENSG00000154358:ENST00000284548:exon5:c.C1537T:p.L513L,ENSG00000154358:ENST00000422127:exon5:c.C1537T:p.L513L,ENSG00000154358:ENST00000570156:exon5:c.C1537T:p.L513L	NA	NA	1q42.13	Score=898;Name=V$SPZ1_01	NA	NA	NA	rs2776853	0.3	0.3	0.25	0.275759	0.3618	0.1706	0.353	0.3086	0.1963	0.36	0.17	0.38	0.28	0.3644	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.160354	NA	NA	0.390022	0.333858	NA	0.341	NA	5.5504446
1097	4	187454972	187454972	T	C	exonic	MTNR1A	NA	synonymous SNV	MTNR1A:NM_005958:exon2:c.A924G:p.R308R	exonic	ENSG00000168412	NA	synonymous SNV	ENSG00000168412:ENST00000307161:exon2:c.A924G:p.R308R	NA	NA	4q35.2	NA	NA	NA	NA	rs8192550	0.04	0.04	0.037	0.0309505	0.0398	0.0675	0.0274	0.0008	0.0276	0.04	0.07	0.03	NA	0.0329	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.994186	NA	NA	0.043605	0.01044	NA	0.043	NA	5.5503616
1097	3	1424850	1424850	T	G	exonic	CNTN6	NA	synonymous SNV	CNTN6:NM_014461:exon18:c.T2391G:p.S797S	exonic	ENSG00000134115	NA	synonymous SNV	ENSG00000134115:ENST00000539053:exon17:c.T2175G:p.S725S,ENSG00000134115:ENST00000350110:exon18:c.T2391G:p.S797S,ENSG00000134115:ENST00000446702:exon18:c.T2391G:p.S797S	NA	NA	3p26.3	Score=889;Name=V$FREAC4_01	NA	NA	NA	rs2291100	0.29	0.29	0.257	0.264577	0.3877	0.3452	0.2781	0.0386	0.3507	0.39	0.37	0.31	0.05	0.3547	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.71198	NA	NA	0.373953	0.091693	NA	0.304	NA	5.5503136
1097	1	154995503	154995503	G	A	intronic	DCST2	NA	NA	NA	intronic	ENSG00000163354	NA	NA	NA	NA	NA	1q21.3	NA	Name=ELF1_(SC-631),AP-2gamma,GR	Name=22	NA	rs2242193	0.59	0.59	0.574	0.61901	0.4503	0.9058	0.6686	0.4569	0.681	0.44	0.92	0.62	0.43	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.301723	NA	NA	NA	NA	NA	0.449	NA	5.5497
1097	3	100275924	100275924	A	G	intronic	TMEM45A	NA	NA	NA	intronic	ENSG00000181458	NA	NA	NA	NA	NA	3q12.2	NA	Name=c-Fos,JunD,ELK4	Name=96	NA	rs7631877	0.5	0.5	0.525	0.475839	0.4503	0.3175	0.4323	0.8018	0.2556	0.46	0.33	0.45	0.81	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.160279	NA	NA	NA	NA	NA	0.645	NA	5.5497
1097	16	90099061	90099061	C	T	intronic	GAS8	NA	NA	NA	intronic	ENSG00000141013	NA	NA	NA	NA	NA	16q24.3	NA	Name=CTCF,ZEB1_(SC-25388)	Name=108	NA	rs4324129	0.56	0.56	0.522	0.532149	0.4503	0.7937	0.5735	0.3457	0.5695	0.46	0.84	0.54	0.39	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.360766	NA	NA	NA	NA	NA	0.551	NA	5.5497
1097	18	21127910	21127910	C	T	intronic	NPC1	NA	NA	NA	intronic	ENSG00000141458	NA	NA	NA	NA	NA	18q11.2	NA	Name=JunD,FOSL2,STAT3	Name=58	NA	rs2435307	0.51	0.51	0.48	0.491014	0.4503	0.5903	0.6052	0.4206	0.4448	0.46	0.63	0.54	0.42	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.201543	NA	NA	NA	NA	NA	0.514	NA	5.5497
1097	18	72168486	72168486	T	C	intronic	CNDP2	NA	NA	NA	exonic	ENSG00000133313	NA	nonsynonymous SNV	ENSG00000133313:ENST00000583203:exon3:c.T100C:p.C34R	NA	NA	18q22.3	NA	NA	Name=15	NA	rs8084410	0.31	0.31	0.288	0.363618	0.2127	0.3006	0.3689	0.5386	0.3436	0.19	0.3	0.31	0.51	0.4046	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.016099	NA	NA	NA	NA	NA	0.348	NA	5.5493667
1097	21	15330476	15330476	C	T	ncRNA_intronic	ANKRD20A11P	NA	NA	NA	ncRNA_exonic	ENSG00000215559	NA	NA	NA	Score=243;Name=lod=13	NA	21q11.2	NA	NA	NA	NA	rs392812	0.13	0.13	0.097	0.11242	0.1173	0.244	0.1009	0.0038	0.1268	0.13	0.24	0.1	0.002	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.746553	NA	NA	NA	NA	NA	0.109	NA	5.5493666
1097	2	101879023	101879023	G	A	exonic	CNOT11	NA	synonymous SNV	CNOT11:NM_017546:exon3:c.G702A:p.T234T	exonic	ENSG00000158435	NA	synonymous SNV	ENSG00000158435:ENST00000289382:exon3:c.G702A:p.T234T	NA	NA	2q11.2	NA	NA	NA	NA	rs1007752	0.02	0.02	0.018	0.014377	0.0408	NA	0.0317	0.0015	0.0072	0.03	NA	0.03	0.002	0.0297	0.047	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.895842	NA	NA	0.04686	0.007036	NA	0.007	NA	5.5493066
1097	17	16852206	16852206	A	C	exonic	TNFRSF13B	NA	synonymous SNV	TNFRSF13B:NM_012452:exon3:c.T291G:p.P97P	exonic	ENSG00000240505	NA	synonymous SNV	ENSG00000240505:ENST00000437538:exon2:c.T153G:p.P51P,ENSG00000240505:ENST00000583789:exon2:c.T153G:p.P51P,ENSG00000240505:ENST00000584950:exon2:c.T153G:p.P51P,ENSG00000240505:ENST00000261652:exon3:c.T291G:p.P97P,ENSG00000240505:ENST00000579315:exon3:c.T291G:p.P97P	NA	NA	17p11.2	NA	NA	NA	NA	rs35062843	0.03	0.03	0.024	0.0485224	0.0408	0.0089	0.0533	0.0265	0.1237	0.03	0.01	0.04	0.03	0.0424	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.368905	NA	NA	0.034419	0.026101	NA	0.007	NA	5.5490476
1097	17	3563339	3563339	C	T	intronic	CTNS	NA	NA	NA	intronic	ENSG00000040531	NA	NA	NA	NA	NA	17p13.2	NA	Name=GR,Pol2(phosphoS2),Pol2,AP-2gamma,c-Fos,Pol2-4H8	Name=109	NA	rs222753	0.3	0.3	0.257	0.265974	0.4513	0.1796	0.3818	0.0915	0.318	0.47	0.18	0.39	0.09	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.463778	NA	NA	NA	NA	NA	0.319	NA	5.5487
1097	8	623593	623593	G	A	exonic	ERICH1	NA	synonymous SNV	ERICH1:NM_207332:exon4:c.C759T:p.A253A	exonic	ENSG00000104714	NA	synonymous SNV	ENSG00000104714:ENST00000522706:exon2:c.C477T:p.A159A,ENSG00000104714:ENST00000262109:exon4:c.C759T:p.A253A	NA	NA	8p23.3	NA	NA	NA	NA	rs55783038	0.21	0.21	0.192	0.197484	0.4066	0.0675	0.2435	0.0371	0.3006	0.39	0.06	0.32	0.02	0.3119	0.4	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.932	T	0.000	T	.	-0.046	3.781	0.089	0.005	0.004	1.748	-0.045708	NA	NA	0.399767	0.090331	NA	0.275	NA	5.5483996
1097	6	29695600	29695600	T	G	ncRNA_intronic	HLA-F-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000214922	NA	NA	NA	NA	NA	6p22.1	NA	Name=Pol2-4H8	NA	NA	rs9258187	0.19	0.19	0.176	0.230831	0.1183	0.2917	0.1628	0.2632	0.2883	0.12	0.27	0.15	0.24	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.514397	NA	NA	NA	NA	NA	0.225	NA	5.5483666
1097	4	119161795	119161795	G	A	exonic	NDST3	NA	synonymous SNV	NDST3:NM_004784:exon11:c.G2235A:p.P745P	exonic	ENSG00000164100	NA	synonymous SNV	ENSG00000164100:ENST00000296499:exon11:c.G2235A:p.P745P	NA	NA	4q26	Score=762;Name=V$MIF1_01	NA	NA	NA	rs617430	0.25	0.25	0.216	0.248403	0.3688	0.2083	0.3588	0.0454	0.362	0.37	0.2	0.36	0.06	0.35	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.371036	NA	NA	0.400349	0.095325	ID=COSM1131293;OCCURENCE=1(prostate)	0.341	NA	5.5475176
1097	1	162313735	162313735	C	T	exonic	NOS1AP	NA	synonymous SNV	NOS1AP:NM_001164757:exon6:c.C549T:p.S183S,NOS1AP:NM_014697:exon6:c.C564T:p.S188S	exonic	ENSG00000198929	NA	synonymous SNV	ENSG00000198929:ENST00000361897:exon6:c.C564T:p.S188S,ENSG00000198929:ENST00000430120:exon6:c.C549T:p.S183S,ENSG00000198929:ENST00000530878:exon6:c.C549T:p.S183S	NA	NA	1q23.3	Score=801;Name=V$PAX3_01	NA	NA	NA	rs3751284	0.42	0.42	0.406	0.430911	0.3549	0.6339	0.451	0.2829	0.4857	0.36	0.64	0.39	0.29	0.4072	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.101598	NA	NA	0.357093	0.289832	NA	0.377	NA	5.5474736
1097	10	46914641	46914641	T	C	ncRNA_intronic	FAM35BP	NA	NA	NA	ncRNA_exonic	ENSG00000165874,ENSG00000229927,ENSG00000272430	NA	NA	NA	Score=646;Name=lod=565	NA	10q11.22	NA	NA	NA	NA	rs7075258	0.11	0.11	0.076	0.121605	0.1193	0.0546	0.0821	0.211	0.1002	0.1	0.05	0.09	0.2	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.863859	NA	NA	NA	NA	NA	NA	NA	5.5473666
1097	19	53945618	53945618	A	C	ncRNA_exonic	TPM3P9	NA	NA	NA	ncRNA_exonic	ENSG00000241015	NA	NA	NA	Score=652;Name=lod=593	NA	19q13.42	NA	NA	NA	NA	rs4803127	0.17	0.17	0.136	0.161941	0.1193	0.2262	0.1599	0.177	0.1207	0.12	0.22	0.16	0.18	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.804698	NA	NA	NA	NA	NA	0.065	NA	5.5473666
1097	21	15342395	15342395	C	T	ncRNA_intronic	ANKRD20A11P	NA	NA	NA	ncRNA_exonic	ENSG00000215559	NA	NA	NA	NA	NA	21q11.2	NA	NA	Name=12	NA	rs384047	0.13	0.13	0.109	0.130192	0.1193	0.2411	0.1081	0.0681	0.1268	0.12	0.22	0.1	0.05	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.646603	NA	NA	NA	NA	NA	0.065	NA	5.5473666
1097	9	127957514	127957514	G	C	intergenic	PPP6C,RABEPK	dist=5296;dist=5307	NA	NA	ncRNA_exonic	ENSG00000235332	NA	NA	NA	Score=775;Name=lod=1880	NA	9q33.3	NA	NA	Name=3	NA	rs359581	0.49	0.49	0.484	0.494209	0.4533	0.62	0.4813	0.4652	0.455	0.42	0.64	0.48	0.44	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.355275	1.355275	NA	NA	NA	NA	0.5	NA	5.5467
1097	16	88695338	88695338	C	G	intronic	ZC3H18	NA	NA	NA	intronic	ENSG00000158545	NA	NA	NA	NA	NA	16q24.2	NA	Name=CTCF,Rad21,SMC3_(ab9263),HMGN3,CTCFL_(SC-98982),CTCF_(C-20),HDAC2_(SC-6296),ZNF263	Name=47	NA	rs4782388	0.43	0.43	0.405	0.406749	0.4533	0.5238	0.5216	0.27	0.3415	0.47	0.52	0.46	0.24	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.112147	NA	NA	NA	NA	NA	0.341	NA	5.5467
1097	19	16197421	16197421	A	G	intronic	TPM4	NA	NA	NA	intronic	ENSG00000167460	NA	NA	NA	NA	NA	19p13.12	NA	Name=Egr-1,Pol2-4H8,GATA-2,HDAC2_(SC-6296),Pol2(b),TAL1_(SC-12984),TCF12,USF-1,GATA2_(CG2-96),c-Myc,NRSF,PU.1,Pol2,IRF4_(M-17),E2F6_(H-50),ETS1,GABP,CTCF,CEBPB,ELF1_(SC-631),Max	Name=53	NA	rs2303149	0.58	0.58	0.586	0.584065	0.4533	0.7242	0.4236	0.702	0.5286	0.44	0.73	0.46	0.71	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.102882	NA	NA	NA	NA	NA	0.616	NA	5.5467
1097	7	97944937	97944937	A	T	intronic	BAIAP2L1	NA	NA	NA	intronic	ENSG00000006453	NA	NA	NA	NA	NA	7q21.3	NA	Name=TCF12,TAL1_(SC-12984),PU.1	Name=16	NA	rs28495959	0.26	0.26	NA	0.229433	0.3509	0.2113	0.2853	0.1861	0.1421	0.35	0.19	0.27	0.2	0.0248	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.206824	NA	NA	0.078195	0.031879	NA	0.007	NA	5.546105
1097	22	37770066	37770066	G	T	exonic	ELFN2	NA	synonymous SNV	ELFN2:NM_052906:exon3:c.C1509A:p.I503I	exonic	ENSG00000166897	NA	synonymous SNV	ENSG00000166897:ENST00000349653:exon1:c.C1509A:p.I503I,ENSG00000166897:ENST00000402918:exon3:c.C1509A:p.I503I	Score=507;Name=lod=154	NA	22q13.1	NA	NA	NA	NA	rs8142615	0.42	0.42	0.396	0.398962	0.3608	0.3502	0.5403	0.4924	0.2618	0.36	0.36	0.47	0.53	0.3915	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.241202	NA	NA	0.368574	0.508852	ID=COSM1416128;OCCURENCE=1(large_intestine)	0.435	NA	5.5457926
1097	6	14118034	14118034	G	A	UTR5	CD83	NM_001040280:c.-9G>A,NM_004233:c.-9G>A	NA	NA	UTR5	ENSG00000112149	ENST00000379153:c.-9G>A	NA	NA	NA	NA	6p23	NA	Name=E2F6,Pol2-4H8,YY1_(C-20),HA-E2F1,TCF4,YY1,Egr-1,Pol2,PU.1,SP1,POU2F2,EBF,TAF1,E2F6_(H-50),TBP,EBF1_(C-8),TCF12,CTCF,Oct-2,PAX5-C20,PAX5-N19,ELF1_(SC-631),BCL3,NFKB,ZBTB7A_(SC-34508),c-Myc	Name=91	NA	rs111804875	0.13	0.13	0.182	0.111621	0.2336	0.002	0.1412	0.0961	0.0992	0.24	0.01	0.14	0.12	0.3901	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.172899	3.172899	NA	0.164054	0.083752	NA	0.058	NA	5.5455794
1097	4	126240510	126240510	T	C	exonic	FAT4	NA	synonymous SNV	FAT4:NM_024582:exon1:c.T2944C:p.L982L	exonic	ENSG00000196159	NA	synonymous SNV	ENSG00000196159:ENST00000394329:exon1:c.T2944C:p.L982L	Score=371;Name=lod=43	NA	4q28.1	NA	NA	Name=29	NA	rs2940779	0.69	0.69	0.713	0.721046	0.7127	0.4603	0.7291	0.9251	0.7168	0.71	0.45	0.74	0.91	0.7012	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.943482	NA	NA	0.707217	0.890481	NA	0.79	NA	5.5455496
1097	19	56719853	56719853	C	A	intergenic	ZSCAN5B,ZSCAN5A	dist=15432;dist=12826	NA	NA	exonic	ENSG00000204532	NA	nonsynonymous SNV	ENSG00000204532:ENST00000376267:exon4:c.C775A:p.Q259K,ENSG00000204532:ENST00000534327:exon5:c.C775A:p.Q259K	NA	NA	19q13.43	NA	NA	NA	NA	rs1865102	0.62	0.62	0.599	0.665935	0.6521	0.6964	0.719	0.652	0.6299	0.62	0.66	0.64	0.57	0.636	0.66	0.69	T	.	.	.	.	.	.	1.000	P	.	.	3.28	T	-1.092	T	0.000	T	0.12	-1.876	0.008	1.29	1.039	.	8.477	-1.876408	NA	1	NA	NA	NA	0.587	NA	5.5452334
1097	6	30530245	30530245	T	C	exonic	PRR3	NA	synonymous SNV	PRR3:NM_001077497:exon3:c.T477C:p.H159H,PRR3:NM_025263:exon4:c.T540C:p.H180H	exonic	ENSG00000204576	NA	synonymous SNV	ENSG00000204576:ENST00000376557:exon3:c.T477C:p.H159H,ENSG00000204576:ENST00000376560:exon4:c.T540C:p.H180H	Score=614;Name=lod=416	NA	6p21.33	Score=777;Name=V$PAX6_01	NA	NA	NA	rs2074504	0.72	0.72	0.744	0.752596	0.6988	0.6994	0.6153	0.8419	0.8395	0.71	0.72	0.6	0.81	0.7215	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.602981	NA	NA	0.701328	0.838575	NA	0.797	NA	5.5450386
1098	21	45959386	45959386	G	A	exonic	KRTAP10-1	NA	synonymous SNV	KRTAP10-1:NM_198691:exon1:c.C648T:p.C216C	exonic	ENSG00000215455	NA	synonymous SNV	ENSG00000215455:ENST00000400375:exon1:c.C648T:p.C216C	Score=259;Name=lod=15	NA	21q22.3	NA	NA	NA	NA	rs233318	0.49	0.49	0.418	0.574481	0.6203	0.4683	0.5634	0.671	0.5143	0.49	0.41	0.58	0.53	0.5014	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.07179	NA	NA	NA	NA	NA	0.029	NA	5.5449666
1098	2	231775297	231775297	T	G	exonic	GPR55	NA	synonymous SNV	GPR55:NM_005683:exon2:c.A381C:p.L127L	exonic	ENSG00000135898	NA	synonymous SNV	ENSG00000135898:ENST00000392039:exon2:c.A381C:p.L127L,ENSG00000135898:ENST00000392040:exon2:c.A381C:p.L127L,ENSG00000135898:ENST00000438398:exon2:c.A381C:p.L127L,ENSG00000135898:ENST00000444078:exon2:c.A381C:p.L127L	Score=423;Name=lod=70	NA	2q37.1	NA	NA	NA	NA	rs1992186	0.44	0.44	0.485	0.496206	0.3489	0.2679	0.3199	0.9153	0.4417	0.34	0.26	0.36	0.87	0.3909	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.238281	NA	NA	0.382093	0.817749	NA	0.413	NA	5.5447736
1098	15	42162713	42162713	G	A	exonic	SPTBN5	NA	synonymous SNV	SPTBN5:NM_016642:exon30:c.C5493T:p.H1831H	exonic	ENSG00000137877	NA	synonymous SNV	ENSG00000137877:ENST00000320955:exon30:c.C5493T:p.H1831H	NA	NA	15q15.1	NA	NA	NA	NA	rs61753871	0.03	0.03	0.024	0.0301518	0.0378	0.0129	0.0533	0.0008	0.0634	0.04	0.02	0.06	NA	0.0455	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.036614	NA	NA	0.038627	0.007104	NA	0.022	NA	5.5447396
1098	9	127957070	127957070	A	G	intergenic	PPP6C,RABEPK	dist=4852;dist=5751	NA	NA	ncRNA_exonic	ENSG00000235332	NA	NA	NA	Score=633;Name=lod=498	NA	9q33.3	NA	NA	Name=3	NA	rs359584	0.45	0.45	0.415	0.453674	0.4553	0.5407	0.3458	0.4584	0.4325	0.42	0.55	0.38	0.42	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.090254	NA	NA	NA	NA	NA	0.435	NA	5.5447
1098	12	4714008	4714008	T	G	intronic	DYRK4	NA	NA	NA	intronic	ENSG00000010219	NA	NA	NA	NA	NA	12p13.32	NA	Name=CTCF,GTF2F1_(RAP-74),CEBPB,Max,ELF1_(SC-631),Rad21,Pol2,PU.1,SMC3_(ab9263),YY1_(C-20),IRF4_(M-17),TAF1,Znf143_(16618-1-AP),USF-1,TBP,c-Myc,NFKB,HEY1,PAX5-C20,SIX5,CTCF_(C-20),CTCF_(SC-5916),RFX5_(N-494),Ini1,Sin3Ak-20,KAP1	Name=147	NA	rs2286576	0.68	0.68	0.719	0.699681	0.4553	0.8631	0.5389	0.8525	0.6902	0.46	0.89	0.55	0.88	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.409913	NA	NA	NA	NA	NA	0.71	NA	5.5447
1098	16	2867450	2867450	G	C	exonic	PRSS21	NA	synonymous SNV	PRSS21:NM_001270452:exon2:c.G84C:p.P28P,PRSS21:NM_006799:exon2:c.G84C:p.P28P,PRSS21:NM_144956:exon2:c.G84C:p.P28P,PRSS21:NM_144957:exon2:c.G84C:p.P28P	exonic	ENSG00000007038	NA	nonsynonymous SNV	ENSG00000007038:ENST00000570629:exon2:c.G76C:p.V26L	NA	NA	16p13.3	NA	NA	Name=13	NA	rs71386691	0.46	0.46	0.388	0.470248	0.5129	0.2738	0.5447	0.5696	0.4417	0.48	0.28	0.51	0.58	0.5022	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.31154	1.31154	NA	0.44024	0.494014	NA	NA	NA	5.54466
1098	19	15890626	15890626	G	A	ncRNA_exonic	CYP4F24P	NA	NA	NA	ncRNA_exonic	ENSG00000267594	NA	NA	NA	NA	NA	19p13.12	NA	NA	Name=19	NA	rs55782900	0.08	0.08	NA	0.0804712	0.1223	0.0575	0.1052	0.0635	0.0665	0.11	0.06	0.11	0.04	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.119041	NA	NA	NA	NA	NA	NA	NA	5.5443666
1098	19	15890725	15890725	G	T	ncRNA_exonic	CYP4F24P	NA	NA	NA	ncRNA_exonic	ENSG00000267594	NA	NA	NA	NA	NA	19p13.12	NA	NA	Name=19	NA	rs56378626	0.09	0.09	0.084	0.0806709	0.1223	0.0575	0.1052	0.0635	0.0675	0.11	0.07	0.11	0.06	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.280315	NA	NA	NA	NA	NA	0.123	NA	5.5443666
1098	3	48677895	48677895	A	T	exonic	CELSR3	NA	synonymous SNV	CELSR3:NM_001407:exon34:c.T9123A:p.A3041A	exonic	ENSG00000008300	NA	synonymous SNV	ENSG00000008300:ENST00000164024:exon34:c.T9123A:p.A3041A,ENSG00000008300:ENST00000544264:exon35:c.T9138A:p.A3046A	NA	NA	3p21.31	NA	NA	NA	NA	rs1264195	0.02	0.02	0.019	0.0139776	0.0487	NA	0.0173	0.0023	0.0061	0.04	NA	0.02	NA	0.0327	0.041	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.163005	NA	NA	0.041385	0.007036	NA	NA	NA	5.5438816
1098	9	74764627	74764627	C	G	intronic	GDA	NA	NA	NA	intronic	ENSG00000119125	NA	NA	NA	NA	NA	9q21.13	NA	Name=SMC3_(ab9263),Pol2,Ini1,SUZ12	Name=20	NA	rs3802506	0.17	0.17	0.159	0.163738	0.1531	0.0754	0.1513	0.3147	0.0706	0.15	0.08	0.15	0.31	0.1535	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.031091	3.031091	NA	0.150187	0.275435	NA	0.109	NA	5.543213
1098	1	64624842	64624842	A	G	exonic	ROR1	NA	synonymous SNV	ROR1:NM_005012:exon8:c.A1353G:p.V451V	exonic	ENSG00000185483	NA	synonymous SNV	ENSG00000185483:ENST00000371079:exon8:c.A1353G:p.V451V	Score=490;Name=lod=131	NA	1p31.3	NA	NA	NA	NA	rs6668545	0.37	0.37	0.353	0.345847	0.3966	0.4127	0.3588	0.2171	0.3896	0.41	0.45	0.41	0.2	0.3592	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.453238	1.453238	NA	0.367674	0.227417	NA	0.391	NA	5.5431926
1098	20	55033476	55033476	C	G	exonic	CASS4	NA	synonymous SNV	CASS4:NM_001164115:exon5:c.C723G:p.L241L,CASS4:NM_001164114:exon6:c.C1872G:p.L624L,CASS4:NM_020356:exon6:c.C2034G:p.L678L,CASS4:NM_001164116:exon7:c.C2034G:p.L678L	exonic	ENSG00000087589	NA	synonymous SNV	ENSG00000087589:ENST00000434344:exon5:c.C723G:p.L241L,ENSG00000087589:ENST00000371336:exon6:c.C2034G:p.L678L,ENSG00000087589:ENST00000360314:exon7:c.C2034G:p.L678L	Score=466;Name=lod=104	NA	20q13.31	NA	NA	NA	NA	rs3746623	0.51	0.51	0.486	0.525958	0.339	0.9196	0.5231	0.416	0.4632	0.32	0.92	0.46	0.38	0.4445	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.664764	NA	NA	0.34	0.404675	NA	0.326	NA	5.5431666
1098	2	113875428	113875428	G	A	upstream	IL1RN	NA	NA	NA	intronic	ENSG00000136689	NA	NA	NA	NA	NA	2q13	NA	Name=GATA-1,Egr-1,STAT3,Pol2,c-Myc	Name=92	NA	rs2234676	0.18	0.18	0.146	0.185903	0.2903	0.1091	0.3213	0.0174	0.2894	0.29	0.09	0.31	0.02	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.415075	NA	NA	NA	NA	NA	0.239	NA	5.5430333
1098	2	215645464	215645464	C	G	exonic	BARD1	NA	nonsynonymous SNV	BARD1:NM_000465:exon4:c.G1134C:p.R378S	exonic	ENSG00000138376	NA	nonsynonymous SNV	ENSG00000138376:ENST00000449967:exon3:c.G702C:p.R234S,ENSG00000138376:ENST00000260947:exon4:c.G1134C:p.R378S	NA	NA	2q35	NA	NA	NA	NA	rs2229571	0.49	0.49	0.462	0.459265	0.6412	0.3413	0.4914	0.379	0.4796	0.65	0.35	0.55	0.35	0.5487	0.65	0.77	T	0.031	B	0.015	B	0.079	N	1.000	P	1.3	L	-0.04	T	-0.921	T	0.000	T	0.294	1.451	10.79	-1.03	0.096	-0.601	2.531	1.450728	1.450728	0.15	0.600814	0.397186	NA	0.493	NA	5.5426194
1098	2	105012664	105012664	C	T	ncRNA_intronic	LOC100287010	NA	NA	NA	ncRNA_exonic	ENSG00000233955	NA	NA	NA	Score=652;Name=lod=597	NA	2q12.1	NA	NA	NA	NA	rs908916	0.12	0.12	0.099	0.108227	0.1243	0.2063	0.1153	0.0197	0.1053	0.12	0.23	0.1	0.02	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.491288	NA	NA	NA	NA	NA	0.188	NA	5.5423666
1098	3	10420087	10420087	T	C	exonic	ATP2B2	NA	synonymous SNV	ATP2B2:NM_001683:exon7:c.A915G:p.Q305Q,ATP2B2:NM_001001331:exon10:c.A1050G:p.Q350Q	exonic	ENSG00000157087	NA	synonymous SNV	ENSG00000157087:ENST00000452124:exon6:c.A618G:p.Q206Q,ENSG00000157087:ENST00000383800:exon7:c.A915G:p.Q305Q,ENSG00000157087:ENST00000460129:exon7:c.A915G:p.Q305Q,ENSG00000157087:ENST00000343816:exon9:c.A1008G:p.Q336Q,ENSG00000157087:ENST00000352432:exon9:c.A1050G:p.Q350Q,ENSG00000157087:ENST00000397077:exon9:c.A915G:p.Q305Q,ENSG00000157087:ENST00000360273:exon10:c.A1050G:p.Q350Q	Score=507;Name=lod=153	NA	3p25.3	NA	NA	NA	NA	rs751122	0.45	0.45	0.451	0.493211	0.3708	0.6994	0.317	0.4418	0.6012	0.37	0.66	0.34	0.42	0.4092	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.223431	NA	NA	0.344651	0.392873	NA	0.449	NA	5.5420156
1098	7	25267963	25267963	G	C	exonic	NPVF	NA	nonsynonymous SNV	NPVF:NM_022150:exon1:c.C96G:p.I32M	exonic	ENSG00000105954	NA	nonsynonymous SNV	ENSG00000105954:ENST00000222674:exon1:c.C96G:p.I32M	NA	NA	7p15.3	NA	NA	NA	NA	rs886354	0.96	0.96	0.962	0.97484	0.9245	1	0.9553	0.9955	0.9867	0.91	1	0.96	0.99	0.9446	1	1	T	0.0	B	0.0	B	0.000	N	1.000	P	-2.095	N	2.01	T	-0.979	T	0.000	T	0.152	-2.703	0	4.47	0.618	-0.261	5.513	-2.702686	NA	1	0.922315	0.985909	NA	0.949	NA	5.5419184
1098	10	121201616	121201616	C	T	intronic	GRK5	NA	NA	NA	intronic	ENSG00000198873	NA	NA	NA	NA	NA	10q26.11	NA	Name=PAX5-N19,PAX5-C20	Name=3	NA	rs2275043	0.22	0.22	0.239	0.220647	0.159	0.1538	0.2839	0.3548	0.1268	0.15	0.16	0.27	0.38	0.1636	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.443251	NA	NA	0.135698	0.289832	NA	0.196	NA	5.541702
1098	1	209788703	209788703	T	C	exonic	LAMB3	NA	synonymous SNV	LAMB3:NM_001017402:exon22:c.A3432G:p.S1144S,LAMB3:NM_000228:exon23:c.A3432G:p.S1144S,LAMB3:NM_001127641:exon23:c.A3432G:p.S1144S	exonic	ENSG00000196878	NA	synonymous SNV	ENSG00000196878:ENST00000391911:exon22:c.A3432G:p.S1144S,ENSG00000196878:ENST00000356082:exon23:c.A3432G:p.S1144S,ENSG00000196878:ENST00000367030:exon23:c.A3432G:p.S1144S	NA	NA	1q32.2	NA	NA	Name=4	NA	rs1049607	0.44	0.44	0.435	0.463259	0.3648	0.381	0.3689	0.6694	0.4376	0.37	0.38	0.38	0.63	0.4019	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.864469	NA	NA	0.35907	0.600545	NA	0.587	NA	5.5408966
1098	2	228736313	228736313	G	T	upstream	DAW1	NA	NA	NA	UTR5	ENSG00000123977	ENST00000373666:c.-93G>T	NA	NA	NA	NA	2q36.3	NA	Name=Max,Nrf1,TAF1	Name=95	NA	rs12478068	0.47	0.47	0.437	0.495008	0.4592	0.4702	0.6254	0.4796	0.4857	0.45	0.44	0.59	0.46	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.943602	NA	NA	NA	NA	NA	0.471	NA	5.5408
1098	8	30924557	30924557	C	T	exonic	WRN	NA	synonymous SNV	WRN:NM_000553:exon6:c.C513T:p.C171C	exonic	ENSG00000165392	NA	synonymous SNV	ENSG00000165392:ENST00000298139:exon6:c.C513T:p.C171C	NA	NA	8p12	NA	Name=FOXA1_(C-20)	NA	NA	rs1800389	0.73	0.73	0.682	0.6873	0.7087	0.87	0.7939	0.4902	0.6677	0.73	0.88	0.78	0.51	0.7032	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.706964	NA	NA	0.714186	0.535633	NA	0.703	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118881.1;CLNDSDB=.;CLNDSDBID=.	5.5405806
1098	9	99525909	99525909	T	C	exonic	ZNF510	NA	synonymous SNV	ZNF510:NM_014930:exon4:c.A135G:p.S45S	exonic	ENSG00000081386	NA	synonymous SNV	ENSG00000081386:ENST00000223428:exon4:c.A135G:p.S45S,ENSG00000081386:ENST00000374641:exon4:c.A135G:p.S45S,ENSG00000081386:ENST00000375231:exon4:c.A135G:p.S45S	NA	NA	9q22.33	NA	NA	NA	NA	rs10978862	0.15	0.15	0.18	0.148363	0.0308	0.2073	0.0519	0.2837	0.0941	0.03	0.25	0.06	0.31	0.0712	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.95442	NA	NA	0.024186	0.221743	NA	0.109	NA	5.5404806
1098	5	57913379	57913379	A	G	intronic	RAB3C	NA	NA	NA	intronic	ENSG00000152932	NA	NA	NA	NA	NA	5q11.2	Score=747;Name=V$STAT3_01	Name=ZNF263	NA	NA	rs2279980	0.31	0.31	0.323	NA	NA	NA	NA	NA	NA	0.21	0.38	0.23	0.45	0.2541	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.56454	NA	NA	0.205424	0.452055	NA	0.37	NA	5.540476
1098	7	100373367	100373367	G	C	exonic	ZAN	NA	unknown	UNKNOWN	exonic	ENSG00000146839	NA	nonsynonymous SNV	ENSG00000146839:ENST00000538115:exon33:c.G6101C:p.S2034T,ENSG00000146839:ENST00000542585:exon33:c.G6101C:p.S2034T,ENSG00000146839:ENST00000546213:exon33:c.G1634C:p.S545T,ENSG00000146839:ENST00000546292:exon33:c.G6101C:p.S2034T	NA	NA	7q22.1	NA	NA	NA	NA	rs539445	0.47	0.47	0.424	0.445088	0.3419	0.7867	0.5418	0.2126	0.4448	0.35	0.82	0.52	0.21	0.4251	0.82	0.81	T	0.0	B	0.0	B	0.082	N	1.000	P	.	.	0.24	T	-0.970	T	0.000	T	0.266	-0.282	2.652	0.773	0.016	-0.246	4.091	-0.281823	NA	NA	0.360789	0.22506	NA	0.297	NA	5.5388777
1098	12	52184271	52184271	T	C	exonic	SCN8A	NA	synonymous SNV	SCN8A:NM_001177984:exon24:c.T4386C:p.P1462P,SCN8A:NM_014191:exon25:c.T4509C:p.P1503P	exonic	ENSG00000196876	NA	synonymous SNV	ENSG00000196876:ENST00000355133:exon23:c.T4386C:p.P1462P,ENSG00000196876:ENST00000545061:exon23:c.T4386C:p.P1462P,ENSG00000196876:ENST00000354534:exon25:c.T4509C:p.P1503P	Score=405;Name=lod=59	NA	12q13.13	NA	NA	NA	NA	rs303815	0.59	0.59	0.546	0.503794	0.7306	0.5724	0.7493	0.3003	0.3006	0.73	0.53	0.72	0.34	0.65	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.84208	NA	NA	0.747211	0.371088	NA	0.478	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118283.2;CLNDSDB=.;CLNDSDBID=.	5.5388556
1098	3	172353572	172353572	A	G	intronic	NCEH1	NA	NA	NA	intronic	ENSG00000144959	NA	NA	NA	NA	NA	3q26.31	NA	Name=eGFP-JunD,c-Fos,PU.1,PAX5-C20,PAX5-N19,CTCF_(C-20),eGFP-FOS,NFKB	Name=63	NA	rs234012	0.45	0.45	0.456	0.414736	0.4612	0.3065	0.3573	0.6044	0.2628	0.46	0.32	0.37	0.63	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.314974	NA	NA	NA	NA	NA	0.384	NA	5.5388
1098	15	75146371	75146371	C	T	exonic	SCAMP2	NA	synonymous SNV	SCAMP2:NM_005697:exon3:c.G216A:p.P72P	exonic	ENSG00000140497	NA	synonymous SNV	ENSG00000140497:ENST00000562363:exon2:c.G147A:p.P49P,ENSG00000140497:ENST00000566480:exon2:c.G96A:p.P32P,ENSG00000140497:ENST00000268099:exon3:c.G216A:p.P72P,ENSG00000140497:ENST00000564529:exon3:c.G216A:p.P72P,ENSG00000140497:ENST00000569904:exon3:c.G216A:p.P72P	NA	NA	15q24.1	NA	NA	NA	NA	rs77456595	0.02	0.02	0.026	0.0147764	0.0487	0.001	0.0216	0.0023	0.0061	0.05	NA	0.02	0.0041	0.0345	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.486199	NA	NA	0.044936	0.009786	NA	0.022	NA	5.5385306
1098	2	130951584	130951584	T	C	exonic	TUBA3E	NA	synonymous SNV	TUBA3E:NM_207312:exon4:c.A831G:p.S277S	exonic	ENSG00000152086	NA	synonymous SNV	ENSG00000152086:ENST00000312988:exon4:c.A831G:p.S277S	Score=602;Name=lod=374	NA	2q21.1	NA	NA	NA	NA	rs7340507	0.42	0.42	0.32	0.46885	0.3628	0.4365	0.5014	0.587	0.4284	0.32	0.43	0.46	0.56	0.4117	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.974221	NA	NA	0.353837	0.520654	NA	0.449	NA	5.5383296
1098	9	35107765	35107765	C	A	exonic	FAM214B	NA	synonymous SNV	FAM214B:NM_025182:exon3:c.G507T:p.G169G	exonic	ENSG00000005238	NA	synonymous SNV	ENSG00000005238:ENST00000378561:exon2:c.G507T:p.G169G,ENSG00000005238:ENST00000322813:exon3:c.G507T:p.G169G,ENSG00000005238:ENST00000378554:exon3:c.G507T:p.G169G,ENSG00000005238:ENST00000378557:exon3:c.G507T:p.G169G,ENSG00000005238:ENST00000488109:exon3:c.G507T:p.G169G,ENSG00000005238:ENST00000603301:exon3:c.G507T:p.G169G,ENSG00000005238:ENST00000605244:exon3:c.G507T:p.G169G	NA	NA	9p13.3	Score=793;Name=V$OLF1_01	NA	NA	NA	rs13287211	0.21	0.21	0.161	0.187101	0.3936	0.003	0.4424	0.0197	0.2096	0.4	0.0035	0.41	0.03	0.3408	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.241048	NA	NA	0.393953	0.072698	NA	0.261	NA	5.5383136
1098	4	164087954	164087954	A	T	UTR5	NAF1	NM_001128931:c.-75T>A,NM_138386:c.-75T>A	NA	NA	UTR5	ENSG00000145414	ENST00000422287:c.-75T>A,ENST00000274054:c.-75T>A	NA	NA	NA	NA	4q32.2	NA	Name=E2F4,GATA-1,TAF1,E2F6_(H-50),c-Fos,GATA-2,Pol2-4H8,E2F6,Sin3Ak-20,YY1_(C-20),TCF4,Egr-1,Pol2,SP1,Mxi1_(bHLH),HEY1,Max,c-Myc,CEBPB,IRF1,TBP	Name=148	NA	rs936562	0.81	0.81	0.783	0.810304	0.7952	0.7877	0.7925	0.82	0.8487	0.8	0.8	0.81	0.83	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.633982	NA	NA	NA	NA	NA	0.87	NA	5.5381334
1098	16	69973825	69973825	G	A	exonic	WWP2	NA	synonymous SNV	WWP2:NM_199424:exon14:c.G1278A:p.E426E,WWP2:NM_001270453:exon21:c.G2247A:p.E749E,WWP2:NM_001270454:exon24:c.G2595A:p.E865E,WWP2:NM_007014:exon25:c.G2595A:p.E865E	exonic	ENSG00000198373	NA	synonymous SNV	ENSG00000198373:ENST00000568684:exon14:c.G1278A:p.E426E,ENSG00000198373:ENST00000542271:exon21:c.G2247A:p.E749E,ENSG00000198373:ENST00000356003:exon23:c.G2595A:p.E865E,ENSG00000198373:ENST00000359154:exon24:c.G2595A:p.E865E,ENSG00000198373:ENST00000448661:exon24:c.G2595A:p.E865E	Score=498;Name=lod=141	NA	16q22.1	NA	NA	NA	NA	rs3748389	0.49	0.49	0.481	0.528355	0.3449	0.8819	0.3862	0.3994	0.6278	0.33	0.86	0.42	0.36	0.4298	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.141207	NA	NA	0.35407	0.371474	ID=COSM435647;OCCURENCE=1(breast)	0.435	NA	5.5378966
1098	19	42365004	42365004	G	C	intronic	RPS19	NA	NA	NA	intronic	ENSG00000105372	NA	NA	NA	NA	NA	19q13.2	NA	Name=SP1,Pol2	Name=67	NA	rs2075749	0.56	0.56	0.542	0.560503	0.4622	0.5069	0.5447	0.7753	0.4376	0.48	0.55	0.49	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.474849	NA	NA	NA	NA	NA	0.58	NA	5.5378
1098	20	36959318	36959318	G	A	intronic	BPI	NA	NA	NA	intronic	ENSG00000101425	NA	NA	NA	NA	NA	20q11.23	NA	Name=HDAC2_(SC-6296),SP1,HNF4A,RXRA	Name=6	NA	rs5743533	0.36	0.36	0.361	0.3748	0.4622	0.1448	0.4784	0.4115	0.3988	0.46	0.11	0.44	0.43	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.328219	NA	NA	NA	NA	NA	0.391	NA	5.5378
1098	9	136405965	136405965	C	A	intronic	ADAMTSL2	NA	NA	NA	intronic	ENSG00000197859	NA	NA	NA	NA	NA	9q34.2	NA	Name=CTCF,Rad21,CTCF_(SC-5916),CTCF_(C-20)	Name=14	NA	rs28504582	0.09	0.09	0.08	0.0656949	0.169	0.0109	0.0893	0.0469	0.0245	0.16	0.01	0.1	0.05	0.1182	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.890223	1.890223	NA	0.175116	0.056741	NA	0.051	NA	5.537684
1098	1	215848587	215848587	T	C	exonic	USH2A	NA	synonymous SNV	USH2A:NM_206933:exon63:c.A12666G:p.T4222T	exonic	ENSG00000042781	NA	synonymous SNV	ENSG00000042781:ENST00000307340:exon63:c.A12666G:p.T4222T,ENSG00000042781:ENST00000366943:exon63:c.A12666G:p.T4222T	NA	NA	1q41	NA	NA	NA	NA	rs2797234	0.31	0.31	0.275	0.303115	0.3738	0.3155	0.4539	0.1793	0.2781	0.37	0.26	0.43	0.19	0.3651	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.743572	NA	NA	0.390349	0.223105	ID=COSM146764;OCCURENCE=1(stomach)	0.326	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000041726.1|RCV000126268.1;CLNDSDB=.|.;CLNDSDBID=.|.	5.5374176
1098	11	118971251	118971251	A	G	intronic	DPAGT1	NA	NA	NA	intronic	ENSG00000172269	NA	NA	NA	NA	NA	11q23.3	NA	Name=Rad21,CTCF,ZNF263,CTCF_(C-20)	Name=135	NA	rs649870	0.45	0.45	0.441	0.457668	0.4632	0.631	0.3069	0.3366	0.544	0.45	0.63	0.35	0.3	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.683279	NA	NA	NA	NA	NA	0.493	NA	5.5368
1098	14	106134806	106134806	G	A	intergenic	TMEM121,ELK2AP	dist=138267;dist=1108	NA	NA	ncRNA_exonic	ENSG00000253755	NA	NA	NA	Score=333;Name=lod=30	NA	14q32.33	NA	Name=ERalpha_a	NA	NA	rs10144746	0.3	0.3	0.196	0.314896	0.4632	0.5367	0.2882	0.0189	0.3528	0.44	0.35	0.28	0.02	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.625072	NA	NA	NA	NA	NA	NA	NA	5.5368
1098	4	16258163	16258163	C	T	ncRNA_exonic	TAPT1-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000242358,ENSG00000263327	NA	NA	NA	NA	NA	4p15.32	NA	Name=CTCF_(SC-5916)	NA	NA	rs10027456	0.15	0.15	0.128	0.143371	0.1302	0.2589	0.111	0.0499	0.1871	0.12	0.27	0.12	0.07	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.284529	NA	NA	NA	NA	NA	0.094	NA	5.5364666
1098	2	170550727	170550727	G	T	intronic	CCDC173	NA	NA	NA	intronic	ENSG00000154479	NA	NA	NA	NA	NA	2q31.1	NA	Name=CTCF,HA-E2F1,KAP1	Name=2	NA	rs11690884	0.08	0.08	0.082	0.0772764	0.168	0.0248	0.0807	0.025	0.1063	0.15	0.02	0.09	0.04	0.1276	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.040042	NA	NA	0.168263	0.053536	NA	0.101	NA	5.536137
1098	17	7306727	7306727	A	G	ncRNA_intronic	C17orf61-PLSCR3	NA	NA	NA	intronic	ENSG00000187838,ENSG00000205544,ENSG00000262481	NA	NA	NA	NA	NA	17p13.1	NA	Name=RXRA,HNF4G_(SC-6558),FOXA1_(SC-101058),FOXA2_(SC-6554),HNF4A,SP1,HDAC2_(SC-6296),HNF4A_(H-171),FOXA1_(C-20)	Name=22	NA	rs17882626	0.2	0.2	0.187	0.165136	0.2843	0.1994	0.1686	0.0492	0.1616	0.3	0.19	0.2	0.05	0.23	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.170648	NA	NA	0.28314	0.096686	NA	0.174	NA	5.5358933
1098	1	5935162	5935162	A	T	splicing	NPHP4	NM_015102:exon22:c.2818-2T>A	NA	NA	splicing	ENSG00000131697	ENST00000489180:exon25:c.3365-2T>A,ENST00000378156:exon22:c.2818-2T>A,ENST00000378169:exon19:c.2508-2T>A	NA	NA	Score=300;Name=lod=22	NA	1p36.31	NA	NA	NA	NA	rs1287637	0.83	0.83	0.82	0.843251	0.8111	0.7907	0.8401	0.91	0.8425	0.81	0.83	0.81	0.88	0.8362	0.89	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	0.905	8.681	4.93	0.745	0.452	6.573	0.905064	NA	NA	0.817231	0.893793	NA	0.71	NA	5.535469
1099	17	76133746	76133746	A	G	intronic	TMC8	NA	NA	NA	intronic	ENSG00000167895	NA	NA	NA	NA	NA	17q25.3	NA	Name=CTCF,eGFP-JunB,c-Myc	Name=21	NA	rs12449680	0.37	0.37	0.374	0.375998	0.2396	0.3968	0.4107	0.4697	0.3436	0.25	0.44	0.41	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.01251	NA	NA	0.225433	0.425064	NA	0.304	NA	5.534967
1099	7	143086832	143086832	T	C	intronic	ZYX	NA	NA	NA	intronic	ENSG00000159840	NA	NA	NA	NA	NA	7q34	Score=902;Name=V$CEBPB_01	NA	Name=65	NA	rs10266621	0.64	0.64	0.636	0.638179	0.4652	0.7718	0.6715	0.7943	0.4438	0.45	0.78	0.65	0.78	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.523429	NA	NA	NA	NA	NA	0.486	NA	5.5348
1099	8	23340738	23340738	G	C	intergenic	ENTPD4,SLC25A37	dist=25494;dist=45625	NA	NA	ncRNA_exonic	ENSG00000253483	NA	NA	NA	Score=705;Name=lod=973	NA	8p21.2	NA	Name=CTCF,NRSF	NA	NA	rs6557676	0.59	0.59	0.541	0.574681	0.4652	0.5863	0.6571	0.6089	0.5706	0.48	0.61	0.63	0.69	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.328608	NA	NA	NA	NA	NA	0.391	NA	5.5348
1099	17	6561192	6561192	T	G	ncRNA_exonic	ALOX15P1	NA	NA	NA	intergenic	ENSG00000264468,ENSG00000141485	dist=2364;dist=26840	NA	NA	Score=317;Name=lod=26	NA	17p13.1	NA	Name=USF-1	NA	NA	rs1808214	0.59	0.59	0.597	0.61262	0.4652	0.7212	0.611	0.6626	0.5859	0.46	0.69	0.59	0.66	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.864114	1.864114	NA	NA	NA	NA	0.739	NA	5.5348
1099	6	33235755	33235755	G	A	exonic	VPS52	NA	synonymous SNV	VPS52:NM_022553:exon9:c.C820T:p.L274L	exonic	ENSG00000223501	NA	synonymous SNV	ENSG00000223501:ENST00000436044:exon9:c.C445T:p.L149L,ENSG00000223501:ENST00000445902:exon9:c.C820T:p.L274L	Score=540;Name=lod=208	NA	6p21.32	NA	NA	NA	NA	rs213199	0.45	0.45	0.482	0.444688	0.3847	0.5823	0.3761	0.4501	0.4059	0.37	0.61	0.33	0.47	0.3881	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.120408	NA	NA	0.359542	0.427201	NA	0.42	NA	5.5343246
1099	15	45779810	45779810	G	A	exonic	SLC30A4	NA	synonymous SNV	SLC30A4:NM_013309:exon6:c.C915T:p.D305D	exonic	ENSG00000104154	NA	synonymous SNV	ENSG00000104154:ENST00000261867:exon6:c.C915T:p.D305D	Score=651;Name=lod=590	NA	15q21.1	Score=866;Name=V$TAL1ALPHAE47_01	NA	NA	NA	rs2453531	0.75	0.75	0.765	0.760783	0.7177	0.7034	0.6095	0.9092	0.771	0.71	0.73	0.65	0.9	0.7149	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.026365	NA	NA	0.699744	0.869199	NA	0.739	NA	5.5343226
1099	21	41137499	41137499	A	G	exonic	IGSF5	NA	synonymous SNV	IGSF5:NM_001080444:exon3:c.A138G:p.Q46Q	exonic	ENSG00000183067	NA	synonymous SNV	ENSG00000183067:ENST00000380588:exon3:c.A138G:p.Q46Q	Score=352;Name=lod=36	NA	21q22.2	NA	NA	NA	NA	rs12626544	0.4	0.4	0.386	0.395966	0.3926	0.4702	0.5389	0.2027	0.4826	0.41	0.48	0.5	0.21	0.3947	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.001046	NA	NA	0.345581	0.225148	NA	0.304	NA	5.5337856
1099	7	112724795	112724795	G	T	UTR5	GPR85	NM_001146266:c.-19C>A,NM_001146267:c.-19C>A,NM_018970:c.-19C>A,NM_001146265:c.-19C>A	NA	NA	UTR5	ENSG00000164604	ENST00000501255:c.-19C>A,ENST00000297146:c.-19C>A,ENST00000424100:c.-19C>A,ENST00000449591:c.-19C>A,ENST00000449735:c.-19C>A,ENST00000438062:c.-19C>A	NA	NA	Score=812;Name=lod=2662	NA	7q31.1	NA	NA	Name=4	NA	rs1575012	0.18	0.18	0.173	0.199281	0.2714	0.0308	0.2032	0.2163	0.273	0.27	0.02	0.2	0.22	0.255	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.58452	1.58452	NA	0.27333	0.215388	NA	0.326	NA	5.5336034
1099	6	29760149	29760149	G	T	ncRNA_exonic	HCG4	NA	NA	NA	ncRNA_exonic	ENSG00000176998	NA	NA	NA	NA	NA	6p22.1	NA	Name=YY1_(C-20)	NA	NA	rs7764777	0.18	0.18	0.193	0.207867	0.1332	0.128	0.1484	0.3828	0.1728	0.12	0.14	0.16	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.017832	NA	NA	NA	NA	NA	0.174	NA	5.5334666
1099	19	50563208	50563208	C	T	ncRNA_intronic	FLJ26850	NA	NA	NA	ncRNA_exonic	ENSG00000269540	NA	NA	NA	Score=343;Name=lod=33	NA	19q13.33	NA	NA	NA	NA	rs12611180	0.17	0.17	0.16	0.143171	0.1332	0.3383	0.1182	0.031	0.1217	0.15	0.32	0.13	0.04	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.23698	NA	0	NA	NA	NA	0.181	NA	5.5334666
1099	12	42503467	42503467	T	C	exonic	GXYLT1	NA	synonymous SNV	GXYLT1:NM_001099650:exon3:c.A420G:p.T140T,GXYLT1:NM_173601:exon4:c.A513G:p.T171T	exonic	ENSG00000151233	NA	synonymous SNV	ENSG00000151233:ENST00000280876:exon3:c.A420G:p.T140T,ENSG00000151233:ENST00000398675:exon4:c.A513G:p.T171T	Score=407;Name=lod=60	NA	12q12	NA	NA	NA	NA	rs7312933	0.33	0.33	0.316	0.352037	0.3787	0.4365	0.3012	0.2012	0.4775	0.39	0.39	0.27	0.2	0.3807	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.133972	NA	NA	0.373893	0.232926	NA	0.297	NA	5.5333736
1099	19	19626769	19626769	C	T	upstream	NDUFA13,TSSK6	NA	NA	NA	UTR5	ENSG00000178093,ENSG00000186010	ENST00000360913:c.-533G>A;ENST00000502506:c.-279C>T,ENST00000507754:c.-279C>T	NA	NA	NA	NA	19p13.11	NA	Name=ELF1_(SC-631),CTCF,E2F6,Pol2,Pol2(b),KAP1,Pol2-4H8,HA-E2F1	Name=18	NA	rs17684164	0.12	0.12	0.122	0.11901	0.17	NA	0.1167	0.1634	0.1309	0.15	NA	0.14	0.21	0.1448	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.90446	NA	NA	0.151954	0.150705	NA	0.123	NA	5.533246
1099	4	185012387	185012387	C	T	exonic	ENPP6	NA	synonymous SNV	ENPP6:NM_153343:exon8:c.G1266A:p.P422P	exonic	ENSG00000164303	NA	synonymous SNV	ENSG00000164303:ENST00000296741:exon8:c.G1266A:p.P422P	NA	NA	4q35.1	NA	NA	NA	NA	rs28495394	0.1	0.1	0.124	0.116813	0.0398	0.004	0.0591	0.3616	0.0225	0.03	0.0035	0.07	0.34	0.0585	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.18781	NA	NA	0.035233	0.286655	NA	0.152	NA	5.5331336
1099	11	18793360	18793360	T	C	intronic	PTPN5	NA	NA	NA	intronic	ENSG00000110786	NA	NA	NA	NA	NA	11p15.1	NA	Name=USF-1	Name=5	NA	rs4075664	0.54	0.54	0.515	0.539137	0.4672	0.8631	0.5821	0.2693	0.6135	0.47	0.88	0.52	0.27	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.370798	NA	NA	NA	NA	NA	0.514	NA	5.5328
1099	14	106134628	106134628	C	G	intergenic	TMEM121,ELK2AP	dist=138089;dist=1286	NA	NA	ncRNA_exonic	ENSG00000253755	NA	NA	NA	NA	NA	14q32.33	NA	Name=Pol2	Name=5	NA	rs10144455	0.45	0.45	0.397	0.485823	0.4672	0.503	0.3386	0.6596	0.3569	0.43	0.3	0.3	0.75	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.135413	NA	NA	NA	NA	NA	NA	NA	5.5328
1099	5	127614472	127614472	A	G	exonic	FBN2	NA	synonymous SNV	FBN2:NM_001999:exon57:c.T7200C:p.S2400S	exonic	ENSG00000138829	NA	synonymous SNV	ENSG00000138829:ENST00000262464:exon57:c.T7200C:p.S2400S,ENSG00000138829:ENST00000508053:exon63:c.T7200C:p.S2400S	Score=558;Name=lod=247	NA	5q23.3	NA	NA	NA	NA	rs190450	0.73	0.73	0.733	0.726637	0.7048	0.8532	0.7118	0.6097	0.7873	0.72	0.86	0.69	0.62	0.7281	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.38594	1.38594	NA	0.701395	0.632093	NA	0.507	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000117030.1|RCV000125075.1;CLNDSDB=.|.;CLNDSDBID=.|.	5.5323716
1099	8	100990177	100990177	A	G	exonic	RGS22	NA	synonymous SNV	RGS22:NM_015668:exon23:c.T3487C:p.L1163L	exonic	ENSG00000132554	NA	synonymous SNV	ENSG00000132554:ENST00000517843:exon1:c.T103C:p.L35L,ENSG00000132554:ENST00000523287:exon21:c.T2944C:p.L982L,ENSG00000132554:ENST00000360863:exon23:c.T3487C:p.L1163L,ENSG00000132554:ENST00000523437:exon23:c.T3451C:p.L1151L	NA	NA	8q22.2	NA	NA	NA	NA	rs7841915	0.08	0.08	0.078	0.0748802	0.0477	0.0456	0.0461	0.1483	0.0542	0.05	0.05	0.06	0.17	0.0505	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.08984	NA	NA	0.036382	0.113966	NA	0.065	NA	5.5320846
1099	4	70172472	70172472	C	T	intergenic	UGT2B28,UGT2B4	dist=11704;dist=173411	NA	NA	ncRNA_exonic	ENSG00000251691	NA	NA	NA	Score=295;Name=lod=21	NA	4q13.2	NA	NA	Name=4	NA	rs6838306	0.38	0.38	0.381	0.36262	0.4682	0.377	0.4481	0.2307	0.3569	0.49	0.37	0.42	0.19	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.040626	NA	NA	NA	NA	NA	0.348	NA	5.5318
1099	19	52131310	52131310	C	T	exonic	SIGLEC5	NA	synonymous SNV	SIGLEC5:NM_003830:exon5:c.G774A:p.P258P	exonic	ENSG00000105501,ENSG00000268500	NA	synonymous SNV	ENSG00000105501:ENST00000222107:exon5:c.G774A:p.P258P,ENSG00000268500:ENST00000429354:exon5:c.G774A:p.P258P,ENSG00000105501:ENST00000570106:exon5:c.G774A:p.P258P,ENSG00000268500:ENST00000599649:exon5:c.G774A:p.P258P,ENSG00000105501:ENST00000534261:exon6:c.G774A:p.P258P	NA	NA	19q13.41	NA	NA	NA	NA	rs61736486	0.07	0.07	0.066	0.0720847	0.0408	0.001	0.0504	0.1785	0.0491	0.04	NA	0.05	0.2	0.0502	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.09567	NA	NA	0.043953	0.1734	NA	0.036	NA	5.5317136
1099	18	13826007	13826007	G	T	exonic	MC5R	NA	synonymous SNV	MC5R:NM_005913:exon1:c.G243T:p.A81A	exonic	ENSG00000176136	NA	synonymous SNV	ENSG00000176136:ENST00000324750:exon1:c.G243T:p.A81A,ENSG00000176136:ENST00000589410:exon2:c.G243T:p.A81A	NA	NA	18p11.21	NA	NA	NA	NA	rs2236699	0.1	0.1	0.09	0.0998403	0.0358	0.1567	0.1095	0.1195	0.0736	0.03	0.18	0.08	0.11	0.0631	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.6128	NA	NA	0.036163	0.106219	NA	0.087	NA	5.5316036
1099	14	65415366	65415366	C	T	intronic	CHURC1-FNTB,RAB15	NA	NA	NA	intronic	ENSG00000125954,ENSG00000139998	NA	NA	NA	NA	NA	14q23.3	NA	Name=HNF4A_(H-171),TBP,HNF4A,SP1,Rad21,HNF4G_(SC-6558)	Name=4	NA	rs1886506	0.1	0.1	0.105	0.0888578	0.1571	0.0794	0.0937	0.0303	0.1043	0.16	0.08	0.11	0.04	0.1468	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.693656	NA	NA	0.164535	0.052202	NA	0.029	NA	5.531565
1099	3	10059658	10059658	G	T	ncRNA_exonic	CIDECP	NA	NA	NA	ncRNA_exonic	ENSG00000186162	NA	NA	NA	NA	NA	3p25.3	NA	NA	Name=89	NA	rs9862221	0.22	0.22	0.231	0.228634	0.1352	0.0665	0.1844	0.4932	0.1656	0.14	0.1	0.19	0.51	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.676314	NA	NA	NA	NA	NA	0.362	NA	5.5314666
1099	15	86182670	86182670	G	A	exonic	AKAP13	NA	synonymous SNV	AKAP13:NM_001270546:exon2:c.G147A:p.K49K,AKAP13:NM_006738:exon9:c.G4227A:p.K1409K,AKAP13:NM_007200:exon9:c.G4227A:p.K1409K	exonic	ENSG00000170776	NA	synonymous SNV	ENSG00000170776:ENST00000361243:exon9:c.G4227A:p.K1409K,ENSG00000170776:ENST00000394518:exon9:c.G4227A:p.K1409K,ENSG00000170776:ENST00000559362:exon9:c.G4227A:p.K1409K	NA	NA	15q25.3	NA	NA	NA	NA	rs16942564	0.06	0.06	0.058	0.0607029	0.0388	0.0377	0.1888	0.0681	0.0061	0.03	0.03	0.14	0.09	0.0557	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.877672	NA	NA	0.041056	0.071072	NA	0.08	NA	5.5311106
1099	11	12315891	12315891	G	A	exonic	MICALCL	NA	nonsynonymous SNV	MICALCL:NM_032867:exon3:c.G913A:p.A305T	exonic	ENSG00000133808	NA	nonsynonymous SNV	ENSG00000133808:ENST00000256186:exon3:c.G913A:p.A305T	NA	NA	11p15.3	NA	NA	NA	NA	rs1493953	0.94	0.94	0.938	0.922524	0.9463	0.9415	0.9496	0.9077	0.8793	0.95	0.95	0.94	0.9	0.9269	0.95	0.69	T	0.0	B	0.0	B	0.690	N	1.000	P	-0.69	N	0.72	T	-1.000	T	0.000	T	0.034	-1.737	0.011	2.13	0.302	-0.089	2.811	-1.736643	NA	0.57	0.929262	0.918321	NA	0.964	NA	5.5308714
1099	7	24703298	24703298	G	A	exonic	MPP6	NA	synonymous SNV	MPP6:NM_016447:exon7:c.G741A:p.E247E	exonic	ENSG00000105926	NA	synonymous SNV	ENSG00000105926:ENST00000409761:exon5:c.G405A:p.E135E,ENSG00000105926:ENST00000222644:exon6:c.G741A:p.E247E,ENSG00000105926:ENST00000430180:exon6:c.G741A:p.E247E,ENSG00000105926:ENST00000396475:exon7:c.G741A:p.E247E	Score=629;Name=lod=479	NA	7p15.3	NA	NA	NA	NA	rs1053962	0.61	0.61	0.648	0.645567	0.3499	0.7996	0.4409	0.9153	0.5716	0.35	0.83	0.41	0.91	0.4546	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.792951	NA	NA	0.331512	0.811847	NA	0.696	NA	5.5306546
1099	7	4900095	4900095	A	G	exonic	PAPOLB	NA	synonymous SNV	PAPOLB:NM_020144:exon1:c.T1347C:p.N449N	exonic	ENSG00000218823	NA	synonymous SNV	ENSG00000218823:ENST00000404991:exon1:c.T1344C:p.N448N	Score=300;Name=lod=22	NA	7p22.1	NA	NA	NA	NA	rs1553960	0.4	0.4	0.44	0.453075	0.341	0.4117	0.3559	0.5537	0.544	0.34	0.36	0.34	0.58	0.4069	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.173616	NA	NA	0.388124	0.517601	ID=COSM150227;OCCURENCE=1(stomach)	0.5	NA	5.5306426
1099	12	93202801	93202801	C	T	exonic	EEA1	NA	synonymous SNV	EEA1:NM_003566:exon18:c.G2331A:p.E777E	exonic	ENSG00000102189	NA	synonymous SNV	ENSG00000102189:ENST00000322349:exon18:c.G2331A:p.E777E	Score=428;Name=lod=73	NA	12q22	NA	NA	NA	NA	rs7970286	0.5	0.5	0.466	0.46845	0.3569	0.8681	0.5245	0.1679	0.5378	0.38	0.9	0.53	0.19	0.4329	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.587128	NA	NA	0.346977	0.209033	NA	0.312	NA	5.5298896
1099	6	161173946	161173946	T	G	exonic	PLG	NA	synonymous SNV	PLG:NM_000301:exon19:c.T2286G:p.G762G	exonic	ENSG00000122194	NA	synonymous SNV	ENSG00000122194:ENST00000308192:exon19:c.T2286G:p.G762G	Score=565;Name=lod=263	NA	6q26	NA	NA	NA	NA	rs11060	0.69	0.69	0.66	0.68111	0.5249	0.9782	0.7075	0.5348	0.7147	0.54	0.98	0.67	0.59	0.6119	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.161543	NA	NA	NA	NA	NA	0.572	NA	5.5298666
1099	1	45246243	45246243	C	A	intergenic	RPS8,BEST4	dist=1831;dist=3014	NA	NA	ncRNA_exonic	ENSG00000234093	NA	NA	NA	Score=733;Name=lod=1268	NA	1p34.1	NA	Name=Pol2(b),Pol2-4H8,Pol2	NA	NA	rs11211032	0.23	0.23	0.202	0.20647	0.4702	0.0268	0.232	0.0295	0.3415	0.48	0.02	0.27	0.05	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.730053	1.730053	NA	NA	NA	NA	0.145	NA	5.5298
1099	16	2645965	2645965	G	A	intronic	PDPK1	NA	NA	NA	intronic	ENSG00000140992	NA	NA	NA	NA	NA	16p13.3	NA	Name=EBF1_(C-8),Max,c-Myc,Egr-1	Name=9	NA	rs1005273	0.39	0.39	0.385	0.377596	0.4702	0.0764	0.4236	0.556	0.319	0.46	0.08	0.48	0.55	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.101097	NA	NA	NA	NA	NA	0.5	NA	5.5298
1099	9	132891113	132891113	G	A	intronic	GPR107	NA	NA	NA	UTR3	ENSG00000148358	ENST00000493417:c.*1244G>A	NA	NA	NA	NA	9q34.11	NA	Name=Pol2-4H8,PU.1,Mxi1_(bHLH)	Name=10	NA	rs2286794	0.7	0.7	0.66	0.695687	0.6372	0.8284	0.6499	0.6657	0.6922	0.64	0.82	0.69	0.65	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.460322	1.460322	NA	NA	NA	NA	NA	NA	5.5294667
1099	7	23357321	23357321	C	T	exonic	IGF2BP3	NA	synonymous SNV	IGF2BP3:NM_006547:exon12:c.G1332A:p.A444A	exonic	ENSG00000136231	NA	synonymous SNV	ENSG00000136231:ENST00000258729:exon12:c.G1332A:p.A444A	Score=563;Name=lod=260	NA	7p15.3	NA	NA	NA	NA	rs156414	0.28	0.28	0.283	0.244609	0.3946	0.3671	0.2435	0.0136	0.2771	0.39	0.37	0.25	0.02	0.333	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.359343	1.359343	NA	0.409884	0.082615	ID=COSM150250;OCCURENCE=1(stomach)	0.29	NA	5.5291826
1099	1	236389999	236389999	C	T	exonic	ERO1LB	NA	synonymous SNV	ERO1LB:NM_019891:exon11:c.G753A:p.S251S	exonic	ENSG00000086619	NA	synonymous SNV	ENSG00000086619:ENST00000354619:exon11:c.G753A:p.S251S	NA	NA	1q42.3	NA	NA	NA	NA	rs10924790	0.15	0.15	0.167	0.14397	0.0318	0.373	0.0778	0.1006	0.1288	0.03	0.4	0.06	0.1	0.0763	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.836133	NA	NA	0.029446	0.093864	NA	0.101	NA	5.5291206
1099	20	44639692	44639692	G	T	intronic	MMP9	NA	NA	NA	intronic	ENSG00000100985	NA	NA	NA	Score=445;Name=lod=86	NA	20q13.12	NA	NA	Name=4	NA	rs2274755	0.16	0.16	0.148	0.186102	0.174	0.1567	0.0807	0.1566	0.3436	0.18	0.16	0.1	0.16	0.1583	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.822526	1.822526	NA	0.138721	0.165456	NA	0.109	NA	5.528979
1099	1	21806571	21806571	A	G	exonic	NBPF3	NA	synonymous SNV	NBPF3:NM_001256417:exon10:c.A1026G:p.K342K,NBPF3:NM_001256416:exon11:c.A1200G:p.K400K,NBPF3:NM_032264:exon11:c.A1236G:p.K412K	exonic	ENSG00000142794	NA	synonymous SNV	ENSG00000142794:ENST00000454000:exon10:c.A1026G:p.K342K,ENSG00000142794:ENST00000318249:exon11:c.A1236G:p.K412K,ENSG00000142794:ENST00000342104:exon11:c.A1200G:p.K400K,ENSG00000142794:ENST00000318220:exon14:c.A1068G:p.K356K,ENSG00000142794:ENST00000434838:exon15:c.A1068G:p.K356K	NA	NA	1p36.12	NA	NA	NA	NA	rs41265989	0.02	0.02	0.009	0.0167732	0.0417	0.001	0.0216	0.0015	0.0245	0.04	NA	0.02	NA	0.0372	0.059	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.020748	NA	NA	0.059023	0.006233	NA	NA	NA	5.5287436
1099	3	10067797	10067797	T	C	ncRNA_exonic	CIDECP	NA	NA	NA	ncRNA_exonic	ENSG00000186162	NA	NA	NA	Score=646;Name=lod=564	NA	3p25.3	NA	NA	NA	NA	rs33917318	0.21	0.21	0.198	0.211262	0.1382	0.0486	0.1686	0.4697	0.135	0.15	0.07	0.19	0.48	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.925021	NA	NA	NA	NA	NA	0.348	NA	5.5284666
1099	10	11911425	11911425	G	C	ncRNA_exonic	PROSER2-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000225778	NA	NA	NA	NA	NA	10p14	NA	NA	Name=6	NA	rs72775915	0.07	0.07	0.066	0.0650958	0.1382	NA	0.0793	0.0272	0.0982	0.14	NA	0.07	0.03	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.440655	NA	NA	NA	NA	NA	0.167	NA	5.5284666
1099	19	38794895	38794895	T	C	UTR5;UTR3	C19orf33;YIF1B	NM_033520:c.-7T>C;NM_001145463:c.*1234A>G,NM_001039673:c.*1097A>G,NM_001039672:c.*1097A>G,NM_001039671:c.*1097A>G,NM_033557:c.*1097A>G,NM_001145462:c.*1097A>G,NM_001145461:c.*1097A>G	NA	NA	UTR5	ENSG00000167644	ENST00000301246:c.-7T>C,ENST00000588605:c.-7T>C	NA	NA	NA	NA	19q13.2	NA	Name=TBP,HA-E2F1,c-Fos,Pol2-4H8,Egr-1,ELK4,GR,Pol2,TAF1	Name=47	NA	rs2304176	0.33	0.33	0.276	0.341454	0.2803	0.5139	0.3934	0.174	0.4162	0.28	0.49	0.36	0.2	0.2926	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.426254	NA	NA	0.231977	0.200862	NA	0.246	NA	5.5284564
1099	19	19626781	19626781	T	G	upstream	NDUFA13,TSSK6	NA	NA	NA	UTR5	ENSG00000178093,ENSG00000186010	ENST00000360913:c.-545A>C;ENST00000502506:c.-267T>G,ENST00000507754:c.-267T>G	NA	NA	NA	NA	19p13.11	NA	Name=Pol2(b),KAP1,Pol2-4H8,HA-E2F1,Pol2,E2F6,ELF1_(SC-631),CTCF	Name=18	NA	rs77254326	0.12	0.12	0.133	0.119209	0.17	NA	0.1182	0.1634	0.1309	0.15	NA	0.14	0.21	0.1453	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.732149	NA	NA	0.156886	0.154767	NA	0.123	NA	5.527814
1099	6	122001307	122001307	G	A	intergenic	GJA1,HSF2	dist=230434;dist=719389	NA	NA	ncRNA_exonic	ENSG00000219135	NA	NA	NA	Score=722;Name=lod=1141	NA	6q22.31	NA	NA	Name=4	NA	rs9320838	0.41	0.41	0.341	0.384185	0.4722	0.4663	0.3458	0.3321	0.3067	0.44	0.49	0.35	0.32	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.46372	NA	NA	NA	NA	NA	0.377	NA	5.5278
1099	16	18839362	18839362	T	C	exonic	SMG1	NA	synonymous SNV	SMG1:NM_015092:exon55:c.A9732G:p.A3244A	exonic	ENSG00000157106	NA	synonymous SNV	ENSG00000157106:ENST00000565324:exon53:c.A9402G:p.A3134A,ENSG00000157106:ENST00000389467:exon55:c.A9735G:p.A3245A,ENSG00000157106:ENST00000446231:exon55:c.A9732G:p.A3244A	Score=451;Name=lod=91	NA	16p12.3	NA	NA	NA	NA	rs12445870	0.24	0.24	0.225	0.242812	0.3926	0.1081	0.2997	0.1346	0.3333	0.39	0.09	0.29	0.13	0.3554	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.465499	1.465499	NA	0.391331	0.176056	NA	0.283	NA	5.5273356
1099	7	148979401	148979401	C	A	exonic	ZNF783	NA	synonymous SNV	ZNF783:NM_001195220:exon6:c.C1608A:p.P536P	exonic	ENSG00000204946	NA	synonymous SNV	ENSG00000204946:ENST00000434415:exon6:c.C1608A:p.P536P	NA	NA	7q36.1	NA	NA	NA	NA	rs3735314	0.02	0.02	0.013	0.01877	0.0308	NA	0.0576	0.0008	0.0225	0.04	0.0017	0.06	0.002	0.0829	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.034578	NA	NA	0.025729	0.005656	NA	0.022	NA	5.5272376
1099	16	22826339	22826339	A	G	exonic	HS3ST2	NA	synonymous SNV	HS3ST2:NM_006043:exon1:c.A408G:p.V136V	exonic	ENSG00000122254	NA	synonymous SNV	ENSG00000122254:ENST00000261374:exon1:c.A408G:p.V136V,ENSG00000122254:ENST00000473392:exon1:c.A408G:p.V136V	Score=601;Name=lod=371	NA	16p12.2	NA	NA	NA	NA	rs208951	0.41	0.41	0.376	0.409944	0.3688	0.3571	0.4741	0.5393	0.2863	0.36	0.37	0.44	0.53	0.4036	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.632251	1.632251	NA	0.36722	0.509646	NA	0.355	NA	5.5270466
1099	7	137128830	137128830	T	C	exonic	DGKI	NA	synonymous SNV	DGKI:NM_004717:exon29:c.A2778G:p.E926E	exonic	ENSG00000157680	NA	synonymous SNV	ENSG00000157680:ENST00000446122:exon28:c.A2724G:p.E908E,ENSG00000157680:ENST00000453654:exon28:c.A1785G:p.E595E,ENSG00000157680:ENST00000288490:exon29:c.A2778G:p.E926E,ENSG00000157680:ENST00000424189:exon29:c.A2817G:p.E939E	Score=505;Name=lod=151	NA	7q33	NA	NA	NA	NA	rs1918837	0.43	0.43	0.405	0.444888	0.3598	0.6627	0.5274	0.2057	0.5726	0.35	0.65	0.51	0.23	0.4261	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.018315	NA	NA	0.353953	0.230909	NA	0.428	NA	5.5268136
1099	2	44993542	44993542	A	G	intronic	CAMKMT	NA	NA	NA	intronic	ENSG00000143919	NA	NA	NA	Score=636;Name=lod=512	NA	2p21	NA	NA	Name=9	NA	rs343937	0.13	0.13	0.133	0.154752	0.17	0.004	0.134	0.1989	0.2495	0.17	0.0017	0.14	0.21	0.1508	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.248701	3.248701	NA	0.152442	0.218112	NA	0.159	NA	5.526758
1099	1	201755469	201755469	C	G	ncRNA_intronic	RNU6-79P	NA	NA	NA	ncRNA_intronic	ENSG00000231871	NA	NA	NA	NA	NA	1q32.1	NA	Name=STAT3	NA	NA	rs12563363	0.2	0.2	0.206	0.223243	0.1402	0.2004	0.1124	0.3684	0.2147	0.13	0.21	0.11	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.52479	3.52479	NA	NA	NA	NA	0.188	NA	5.5264666
1099	8	56363564	56363564	C	T	ncRNA_exonic	SBF1P1	NA	NA	NA	ncRNA_exonic	ENSG00000248522	NA	NA	NA	Score=490;Name=lod=131	NA	8q12.1	NA	NA	NA	NA	rs2939632	0.23	0.23	0.171	0.232428	0.1402	0.4306	0.3285	0.0923	0.2444	0.14	0.42	0.26	0.12	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.950479	NA	NA	NA	NA	NA	0.094	NA	5.5264666
1099	13	113527967	113527967	G	A	exonic	ATP11A	NA	synonymous SNV	ATP11A:NM_015205:exon27:c.G3138A:p.S1046S,ATP11A:NM_032189:exon27:c.G3138A:p.S1046S	exonic	ENSG00000068650	NA	synonymous SNV	ENSG00000068650:ENST00000419631:exon2:c.G114A:p.S38S,ENSG00000068650:ENST00000283558:exon27:c.G3138A:p.S1046S,ENSG00000068650:ENST00000375630:exon27:c.G3138A:p.S1046S,ENSG00000068650:ENST00000375645:exon27:c.G3138A:p.S1046S,ENSG00000068650:ENST00000487903:exon27:c.G3138A:p.S1046S	Score=549;Name=lod=227	NA	13q34	NA	NA	NA	NA	rs1320525	0.39	0.39	0.385	0.3748	0.3658	0.4742	0.3761	0.298	0.3845	0.39	0.43	0.43	0.3	0.3836	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.590337	NA	NA	0.391163	0.30867	NA	0.304	NA	5.5261036
1099	6	10460560	10460560	T	C	intergenic	MIR5689,GCNT2	dist=20533;dist=61008	NA	NA	ncRNA_exonic	ENSG00000238076	NA	NA	NA	NA	NA	6p24.3	NA	Name=BATF,TCF12,EBF1_(C-8),PAX5-N19,Oct-2,NFKB,BCL11A,Pbx3,IRF4_(M-17),MEF2A,NRSF,PU.1,MEF2C_(SC-13268),POU2F2,EBF	Name=9	NA	rs470790	0.54	0.54	0.555	0.598243	0.4742	0.494	0.5231	0.7579	0.6708	0.48	0.5	0.47	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.122864	NA	NA	NA	NA	NA	0.58	NA	5.5258
1100	5	1053396	1053396	C	G	intronic	SLC12A7	NA	NA	NA	intronic	ENSG00000113504	NA	NA	NA	NA	NA	5p15.33	NA	Name=CTCF_(SC-5916),SMC3_(ab9263),CTCF	Name=7	NA	rs2241603	0.36	0.36	0.316	0.334665	0.4751	0.374	0.4135	0.0635	0.4601	0.5	0.36	0.44	0.07	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.26763	NA	NA	NA	NA	NA	0.254	NA	5.5249
1100	12	56494991	56494991	G	A	exonic	ERBB3	NA	synonymous SNV	ERBB3:NM_001982:exon27:c.G3348A:p.R1116R	exonic	ENSG00000065361	NA	synonymous SNV	ENSG00000065361:ENST00000549832:exon5:c.G708A:p.R236R,ENSG00000065361:ENST00000553131:exon10:c.G1071A:p.R357R,ENSG00000065361:ENST00000550070:exon12:c.G1269A:p.R423R,ENSG00000065361:ENST00000450146:exon14:c.G1419A:p.R473R,ENSG00000065361:ENST00000267101:exon27:c.G3348A:p.R1116R,ENSG00000065361:ENST00000415288:exon28:c.G3171A:p.R1057R	Score=346;Name=lod=34	NA	12q13.2	NA	NA	NA	NA	rs2271189	0.32	0.32	0.287	0.252196	0.4036	0.2887	0.3718	0.0734	0.2157	0.41	0.35	0.37	0.1	0.3417	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.185029	NA	NA	0.39686	0.140717	NA	0.312	NA	5.5245066
1100	6	160679400	160679400	C	A	exonic	SLC22A2	NA	synonymous SNV	SLC22A2:NM_003058:exon1:c.G390T:p.T130T	exonic	ENSG00000112499	NA	synonymous SNV	ENSG00000112499:ENST00000366953:exon1:c.G390T:p.T130T,ENSG00000112499:ENST00000366952:exon3:c.G327T:p.T109T	Score=527;Name=lod=185	NA	6q25.3	NA	NA	NA	NA	rs624249	0.29	0.29	0.296	0.264377	0.3926	0.1498	0.268	0.2663	0.2454	0.42	0.17	0.31	0.24	0.3433	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.336319	1.336319	NA	0.406512	0.245913	NA	0.275	NA	5.5242546
1100	1	240370629	240370629	C	G	exonic	FMN2	NA	synonymous SNV	FMN2:NM_020066:exon5:c.C2517G:p.T839T	exonic	ENSG00000155816	NA	synonymous SNV	ENSG00000155816:ENST00000319653:exon5:c.C2517G:p.T839T	Score=304;Name=lod=23	NA	1q43	NA	NA	NA	NA	rs10926166	0.26	0.26	0.24	0.28734	0.4066	0.1032	0.2507	0.2617	0.4151	0.4	0.09	0.22	0.25	0.3481	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.381678	NA	NA	0.388837	0.287789	NA	0.29	NA	5.5231296
1100	1	199878423	199878423	T	C	intergenic	LOC100131234,NR5A2	dist=971865;dist=118307	NA	NA	ncRNA_exonic	ENSG00000229747	NA	NA	NA	NA	NA	1q32.1	NA	Name=p300_(N-15),p300,CEBPB,RFX5_(N-494),c-Jun,c-Fos,ERalpha_a,GATA-2,GATA3_(SC-268),FOXA1_(C-20)	Name=43	NA	rs11584013	0.55	0.55	0.531	0.559704	0.4771	0.6458	0.5865	0.497	0.6217	0.49	0.66	0.54	0.51	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.061435	NA	NA	NA	NA	NA	0.616	NA	5.5229
1100	6	33668370	33668370	A	G	intronic	MNF1	NA	NA	NA	intronic	ENSG00000137288	NA	NA	NA	NA	NA	6p21.31	NA	Name=CTCF_(SC-5916),RFX5_(N-494),SMC3_(ab9263),ZNF263,CTCFL_(SC-98982),Znf143_(16618-1-AP),CTCF,Rad21,CTCF_(C-20)	Name=143	NA	rs942643	0.51	0.51	0.464	0.533546	0.4771	0.8591	0.5908	0.118	0.7771	0.48	0.84	0.59	0.13	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.200918	NA	NA	NA	NA	NA	0.478	NA	5.5229
1100	7	91715662	91715662	C	T	exonic	AKAP9	NA	synonymous SNV	AKAP9:NM_005751:exon37:c.C9145T:p.L3049L,AKAP9:NM_147185:exon37:c.C9121T:p.L3041L	exonic	ENSG00000127914	NA	synonymous SNV	ENSG00000127914:ENST00000394534:exon11:c.C2683T:p.L895L,ENSG00000127914:ENST00000358100:exon36:c.C8995T:p.L2999L,ENSG00000127914:ENST00000356239:exon37:c.C9145T:p.L3049L,ENSG00000127914:ENST00000359028:exon37:c.C9157T:p.L3053L	Score=431;Name=lod=75	NA	7q21.2	NA	NA	NA	NA	rs28927678	0.3	0.3	0.286	0.295727	0.3837	0.1617	0.3458	0.2201	0.41	0.39	0.17	0.36	0.24	0.3589	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.016472	NA	NA	0.401279	0.266682	NA	0.355	NA	5.5227876
1100	22	42908186	42908186	G	C	ncRNA_exonic	SERHL	NA	NA	NA	ncRNA_exonic	ENSG00000172250	NA	NA	NA	Score=300;Name=lod=22	NA	22q13.2	NA	NA	NA	NA	rs144737997	0.09	0.09	0.036	0.0754792	0.1441	0.003	0.1787	0.056	0.0327	0.14	0.0017	0.2	0.05	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.691136	1.691136	NA	NA	NA	NA	0.058	NA	5.5225666
1100	15	31093425	31093425	A	C	intergenic	LOC100288637,HERC2P10	dist=28216;dist=16814	NA	NA	ncRNA_exonic	ENSG00000103832	NA	NA	NA	Score=543;Name=lod=214	NA	15q13.2	NA	Name=CTCF	NA	NA	rs798093	0.37	0.37	0.261	0.518371	0.4791	0.1667	0.4669	0.9425	0.3845	0.36	0.12	0.37	0.68	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.287846	NA	0.38	NA	NA	NA	NA	NA	5.5209
1100	11	99690450	99690450	T	C	exonic	CNTN5	NA	synonymous SNV	CNTN5:NM_001243270:exon3:c.T231C:p.Y77Y,CNTN5:NM_001243271:exon4:c.T231C:p.Y77Y,CNTN5:NM_014361:exon4:c.T231C:p.Y77Y	exonic	ENSG00000149972	NA	synonymous SNV	ENSG00000149972:ENST00000279463:exon2:c.T231C:p.Y77Y,ENSG00000149972:ENST00000528682:exon3:c.T231C:p.Y77Y,ENSG00000149972:ENST00000524871:exon4:c.T231C:p.Y77Y,ENSG00000149972:ENST00000527185:exon4:c.T231C:p.Y77Y	NA	NA	11q22.1	NA	NA	NA	NA	rs12222337	0.11	0.11	0.052	NA	NA	NA	NA	NA	NA	0.12	0.05	0.14	0.16	0.146	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.053116	NA	NA	NA	NA	NA	0.029	NA	5.5206666
1100	12	8512315	8512315	G	A	ncRNA_intronic	LOC389634	NA	NA	NA	ncRNA_exonic	ENSG00000242661	NA	NA	NA	Score=787;Name=lod=2104	NA	12p13.31	NA	NA	NA	NA	rs12307145	0.33	0.33	0.262	0.375998	0.1461	0.5903	0.2709	0.4546	0.3599	0.15	0.56	0.25	0.4	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.347977	NA	NA	NA	NA	NA	0.275	NA	5.5205666
1100	2	1418192	1418192	C	G	exonic	TPO	NA	synonymous SNV	TPO:NM_175721:exon1:c.C12G:p.L4L,TPO:NM_175722:exon1:c.C12G:p.L4L,TPO:NM_000547:exon2:c.C12G:p.L4L,TPO:NM_001206744:exon2:c.C12G:p.L4L,TPO:NM_001206745:exon2:c.C12G:p.L4L,TPO:NM_175719:exon2:c.C12G:p.L4L	exonic	ENSG00000115705	NA	synonymous SNV	ENSG00000115705:ENST00000382198:exon1:c.C12G:p.L4L,ENSG00000115705:ENST00000423320:exon1:c.C12G:p.L4L,ENSG00000115705:ENST00000329066:exon2:c.C12G:p.L4L,ENSG00000115705:ENST00000337415:exon2:c.C12G:p.L4L,ENSG00000115705:ENST00000345913:exon2:c.C12G:p.L4L,ENSG00000115705:ENST00000346956:exon2:c.C12G:p.L4L,ENSG00000115705:ENST00000349624:exon2:c.C12G:p.L4L,ENSG00000115705:ENST00000382201:exon2:c.C12G:p.L4L,ENSG00000115705:ENST00000382269:exon2:c.C12G:p.L4L,ENSG00000115705:ENST00000539820:exon2:c.C12G:p.L4L	NA	NA	2p25.3	NA	Name=Rad21	NA	NA	rs9678281	0.33	0.33	0.311	0.311701	0.3887	0.2361	0.3703	0.2769	0.316	0.39	0.21	0.4	0.3	0.3691	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.554563	NA	NA	0.388488	0.290513	ID=COSM1399678;OCCURENCE=1(large_intestine)	0.377	NA	5.5203786
1100	19	10600442	10600442	G	C	exonic	KEAP1	NA	synonymous SNV	KEAP1:NM_012289:exon4:c.C1413G:p.L471L,KEAP1:NM_203500:exon4:c.C1413G:p.L471L	exonic	ENSG00000079999	NA	synonymous SNV	ENSG00000079999:ENST00000171111:exon4:c.C1413G:p.L471L,ENSG00000079999:ENST00000393623:exon4:c.C1413G:p.L471L	Score=489;Name=lod=129	NA	19p13.2	NA	NA	NA	NA	rs1048290	0.49	0.49	0.495	0.508187	0.3549	0.5337	0.2983	0.7534	0.4571	0.35	0.54	0.35	0.75	0.4203	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.772331	NA	NA	0.372093	0.684748	ID=COSM148507;OCCURENCE=1(stomach)	0.457	NA	5.5193736
1100	12	123003317	123003317	T	C	intronic	RSRC2	NA	NA	NA	intronic	ENSG00000111011	NA	NA	NA	NA	NA	12q24.31	NA	Name=STAT3	Name=19	NA	rs11058562	0.35	0.35	0.343	0.336262	0.4811	0.4315	0.402	0.0492	0.4305	0.5	0.4	0.35	0.07	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.707972	NA	NA	NA	NA	NA	0.391	NA	5.5189
1100	12	57637593	57637593	G	A	UTR3	STAC3	NM_145064:c.*2C>T	NA	NA	UTR3	ENSG00000185482	ENST00000332782:c.*2C>T,ENST00000554578:c.*2C>T,ENST00000557176:c.*157C>T,ENST00000546246:c.*2C>T	NA	NA	NA	NA	12q13.3	NA	Name=CTCF,Rad21,ELF1_(SC-631),SMC3_(ab9263),Znf143_(16618-1-AP),E2F6_(H-50),ZBTB7A_(SC-34508),CTCF_(C-20),Ini1,Egr-1,CTCF_(SC-5916)	Name=133	NA	rs3204635	0.21	0.21	0.184	0.250998	0.2545	0.2232	0.2075	0.1475	0.4468	0.25	0.22	0.21	0.13	0.2891	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.71162	NA	NA	0.27093	0.187472	NA	0.225	NA	5.5188034
1100	4	8621167	8621167	G	A	exonic	CPZ	NA	synonymous SNV	CPZ:NM_003652:exon10:c.G1749A:p.G583G,CPZ:NM_001014447:exon11:c.G1782A:p.G594G,CPZ:NM_001014448:exon11:c.G1371A:p.G457G	exonic	ENSG00000109625	NA	synonymous SNV	ENSG00000109625:ENST00000429646:exon9:c.G606A:p.G202G,ENSG00000109625:ENST00000315782:exon10:c.G1749A:p.G583G,ENSG00000109625:ENST00000360986:exon11:c.G1782A:p.G594G,ENSG00000109625:ENST00000382480:exon11:c.G1371A:p.G457G	NA	NA	4p16.1	NA	NA	NA	NA	rs9342	0.06	0.06	0.06	0.0599042	0.0507	0.0288	0.0331	0.1354	0.0184	0.05	0.02	0.03	0.14	0.0493	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.091414	NA	NA	0.048023	0.113028	NA	0.022	NA	5.5186436
1100	10	123842825	123842825	C	G	exonic	TACC2	NA	synonymous SNV	TACC2:NM_206862:exon4:c.C810G:p.P270P	exonic	ENSG00000138162	NA	synonymous SNV	ENSG00000138162:ENST00000334433:exon3:c.C810G:p.P270P,ENSG00000138162:ENST00000453444:exon3:c.C810G:p.P270P,ENSG00000138162:ENST00000369005:exon4:c.C810G:p.P270P,ENSG00000138162:ENST00000515273:exon4:c.C810G:p.P270P,ENSG00000138162:ENST00000515603:exon4:c.C810G:p.P270P	NA	NA	10q26.13	NA	NA	NA	NA	rs11816938	0.07	0.07	0.059	0.0808706	0.0447	0.0546	0.1427	0.1044	0.0695	0.05	0.06	0.09	0.11	0.0654	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.223618	NA	NA	0.038023	0.082615	NA	0.094	NA	5.5185436
1100	1	11205058	11205058	C	T	exonic	MTOR	NA	synonymous SNV	MTOR:NM_004958:exon33:c.G4731A:p.A1577A	exonic	ENSG00000198793	NA	synonymous SNV	ENSG00000198793:ENST00000361445:exon33:c.G4731A:p.A1577A	Score=463;Name=lod=102	NA	1p36.22	NA	Name=GATA-2	NA	NA	rs1057079	0.61	0.61	0.577	0.547524	0.7356	0.8165	0.7017	0.0635	0.6217	0.74	0.82	0.7	0.08	0.6779	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.5731	1.5731	NA	0.735	0.176804	NA	0.558	NA	5.5181666
1100	12	53010024	53010024	C	T	exonic	KRT73	NA	synonymous SNV	KRT73:NM_175068:exon2:c.G588A:p.T196T	exonic	ENSG00000186049	NA	synonymous SNV	ENSG00000186049:ENST00000305748:exon2:c.G588A:p.T196T	NA	NA	12q13.13	NA	NA	NA	NA	rs61736101	0.08	0.08	0.074	0.0844649	0.0477	0.0288	0.0605	0.208	0.0297	0.04	0.03	0.07	0.19	0.0524	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.789504	NA	NA	0.048605	0.171584	NA	0.109	NA	5.5179616
1100	19	57133633	57133633	C	T	exonic	ZNF71	NA	synonymous SNV	ZNF71:NM_021216:exon3:c.C978T:p.Y326Y	exonic	ENSG00000197951	NA	synonymous SNV	ENSG00000197951:ENST00000328070:exon3:c.C978T:p.Y326Y	NA	NA	19q13.43	NA	NA	NA	NA	rs35011777	0.03	0.03	0.013	0.0163738	0.0507	NA	0.036	0.003	0.002	0.05	NA	0.05	0.0041	0.0403	0.059	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.321841	NA	NA	0.05907	0.011121	NA	0.072	NA	5.5165966
1100	6	32520795	32520795	T	C	ncRNA_exonic	HLA-DRB6	NA	NA	NA	ncRNA_exonic	ENSG00000229391	NA	NA	NA	NA	NA	6p21.32	NA	NA	Name=2	NA	rs66969121	0.11	0.11	0.062	0.10004	0.1501	0.0446	0.1254	0.1044	0.0818	0.15	0.05	0.13	0.1	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.131527	NA	NA	NA	NA	NA	0.138	NA	5.5165666
1100	7	128140982	128140982	T	C	exonic	METTL2B	NA	synonymous SNV	METTL2B:NM_018396:exon8:c.T942C:p.Y314Y	exonic	ENSG00000165055	NA	synonymous SNV	ENSG00000165055:ENST00000481392:exon3:c.T234C:p.Y78Y,ENSG00000165055:ENST00000480046:exon7:c.T747C:p.Y249Y,ENSG00000165055:ENST00000262432:exon8:c.T942C:p.Y314Y	Score=592;Name=lod=338	NA	7q32.1	NA	NA	NA	NA	rs1132651	0.29	0.29	0.295	0.358227	0.3827	0.2877	0.3055	0.4145	0.3671	0.32	0.23	0.3	0.29	0.3711	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.438405	NA	NA	0.397069	0.402179	NA	0.406	NA	5.5157976
1100	7	43846603	43846603	A	G	exonic	BLVRA	NA	synonymous SNV	BLVRA:NM_000712:exon8:c.A660G:p.G220G,BLVRA:NM_001253823:exon9:c.A660G:p.G220G	exonic	ENSG00000106605	NA	synonymous SNV	ENSG00000106605:ENST00000265523:exon8:c.A660G:p.G220G,ENSG00000106605:ENST00000402924:exon9:c.A660G:p.G220G	Score=437;Name=lod=80	NA	7p13	NA	NA	NA	NA	rs7738	0.42	0.42	0.428	0.47504	0.3529	0.4048	0.3718	0.6059	0.5695	0.37	0.37	0.38	0.59	0.4199	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.161721	NA	NA	0.378256	0.528824	NA	0.493	NA	5.5156106
1100	3	194476468	194476468	G	A	ncRNA_intronic	LOC100507391	NA	NA	NA	ncRNA_exonic	ENSG00000234805	NA	NA	NA	Score=387;Name=lod=50	NA	3q29	NA	NA	NA	NA	rs3890436	0.29	0.29	0.298	0.333866	0.1511	0.3393	0.183	0.587	0.2812	0.15	0.33	0.17	0.55	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.316274	NA	NA	NA	NA	NA	0.225	NA	5.5155666
1100	3	194476482	194476482	C	T	ncRNA_intronic	LOC100507391	NA	NA	NA	ncRNA_exonic	ENSG00000234805	NA	NA	NA	Score=387;Name=lod=50	NA	3q29	NA	NA	NA	NA	rs11920491	0.29	0.29	0.306	0.333866	0.1511	0.3393	0.183	0.587	0.2812	0.15	0.33	0.17	0.55	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.442672	NA	NA	NA	NA	NA	0.225	NA	5.5155666
1100	3	194476996	194476996	A	G	ncRNA_intronic	LOC100507391	NA	NA	NA	ncRNA_exonic	ENSG00000234805	NA	NA	NA	Score=251;Name=lod=14	NA	3q29	NA	NA	NA	NA	rs7617609	0.3	0.3	0.32	0.339257	0.1511	0.3403	0.1844	0.6059	0.2812	0.15	0.33	0.17	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.196756	NA	NA	NA	NA	NA	0.232	NA	5.5155666
1100	3	194477769	194477769	T	C	ncRNA_intronic	LOC100507391	NA	NA	NA	ncRNA_exonic	ENSG00000234805	NA	NA	NA	NA	NA	3q29	NA	NA	Name=14	NA	rs11919157	0.31	0.31	0.322	0.355831	0.1511	0.3403	0.1873	0.6672	0.2812	0.15	0.33	0.17	0.62	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.319981	NA	NA	NA	NA	NA	0.268	NA	5.5155666
1100	1	26527810	26527810	G	A	intronic	CATSPER4	NA	NA	NA	intronic	ENSG00000188782	NA	NA	NA	NA	NA	1p36.11	NA	Name=Egr-1,CTCF_(SC-5916),Pol2,PU.1,HDAC2_(SC-6296),E2F6,c-Jun,CTCFL_(SC-98982),eGFP-JunB,Pol2(b),E2F6_(H-50),HMGN3,TAL1_(SC-12984),GABP,CTCF,CHD2_(N-1250),Rad21,ELF1_(SC-631),HEY1,Max,CCNT2,NF-YB	Name=91	NA	rs1889756	0.19	0.19	0.009	0.21845	0.2614	0.0218	0.1671	0.407	0.1585	0.24	0.02	0.17	0.32	0.2204	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.899419	NA	NA	0.00314	0.005901	NA	NA	NA	5.51506
1101	17	42476409	42476409	G	A	exonic	GPATCH8	NA	synonymous SNV	GPATCH8:NM_001002909:exon8:c.C3036T:p.H1012H	exonic	ENSG00000186566	NA	synonymous SNV	ENSG00000186566:ENST00000591680:exon8:c.C3036T:p.H1012H,ENSG00000186566:ENST00000434000:exon9:c.C2802T:p.H934H	NA	NA	17q21.31	NA	NA	NA	NA	rs3744427	0.04	0.04	0.036	0.028754	0.0537	0.0258	0.0389	0.0045	0.0317	0.06	0.04	0.04	0.002	0.0413	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.2683	NA	NA	0.057093	0.009305	NA	0.007	NA	5.5145736
1101	3	152553628	152553628	C	T	exonic	P2RY1	NA	synonymous SNV	P2RY1:NM_002563:exon1:c.C57T:p.A19A	exonic	ENSG00000169860	NA	synonymous SNV	ENSG00000169860:ENST00000305097:exon1:c.C57T:p.A19A	NA	NA	3q25.2	NA	NA	NA	NA	rs1065776	0.09	0.09	0.081	0.110423	0.0497	0.0347	0.0706	0.2239	0.1258	0.05	0.04	0.06	0.21	0.065	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.527964	NA	NA	0.037674	0.170449	NA	0.058	NA	5.5142926
1101	10	44285190	44285190	G	C	ncRNA_exonic	HNRNPA3P1	NA	NA	NA	ncRNA_exonic	ENSG00000226790	NA	NA	NA	Score=770;Name=lod=1790	NA	10q11.21	NA	NA	NA	NA	rs1998749	0.08	0.08	0.097	0.0830671	0.0775	NA	0.0836	0.2005	0.0153	0.06	NA	0.1	0.18	0.0749	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.304897	NA	NA	NA	NA	NA	0.094	NA	5.5142666
1101	6	32609726	32609726	C	T	intronic	HLA-DQA1	NA	NA	NA	intronic	ENSG00000196735	NA	NA	NA	NA	NA	6p21.32	NA	Name=Pol2,Pol2-4H8	Name=3	NA	rs9272743	0.25	0.25	0.102	0.232428	0.2535	0.1815	0.2954	0.2678	0.1708	0.23	0.2	0.32	0.27	0.2324	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.81228	NA	NA	NA	NA	NA	0.123	NA	5.5141
1101	2	3504687	3504687	A	G	exonic	ADI1	NA	synonymous SNV	ADI1:NM_018269:exon3:c.T318C:p.D106D	exonic	ENSG00000182551	NA	synonymous SNV	ENSG00000182551:ENST00000327435:exon3:c.T318C:p.D106D,ENSG00000182551:ENST00000382093:exon3:c.T300C:p.D100D	Score=415;Name=lod=65	NA	2p25.3	NA	NA	NA	NA	rs9950	0.53	0.53	0.535	0.533546	0.3887	0.4484	0.451	0.8918	0.3446	0.39	0.46	0.42	0.9	0.4086	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.182764	NA	NA	0.355465	0.802315	ID=COSM148794;OCCURENCE=1(stomach)	0.594	NA	5.5139016
1101	1	26527809	26527809	A	C	intronic	CATSPER4	NA	NA	NA	intronic	ENSG00000188782	NA	NA	NA	NA	NA	1p36.11	NA	Name=CCNT2,Max,HEY1,ELF1_(SC-631),Rad21,NF-YB,CTCF,CHD2_(N-1250),E2F6_(H-50),eGFP-JunB,Pol2(b),CTCFL_(SC-98982),TAL1_(SC-12984),HMGN3,PU.1,CTCF_(SC-5916),Pol2,Egr-1,c-Jun,E2F6,HDAC2_(SC-6296)	Name=91	NA	rs1889755	0.19	0.19	0.013	0.21845	0.2614	0.0218	0.1671	0.407	0.1585	0.24	0.02	0.17	0.32	0.2205	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.614063	NA	NA	0.004302	0.011121	NA	NA	NA	5.513798
1101	4	89618837	89618837	T	C	exonic	NAP1L5	NA	synonymous SNV	NAP1L5:NM_153757:exon1:c.A69G:p.A23A	exonic	ENSG00000177432	NA	synonymous SNV	ENSG00000177432:ENST00000323061:exon1:c.A69G:p.A23A	NA	NA	4q22.1	NA	Name=HEY1,GATA-1,Pol2,YY1,YY1_(C-20),CtBP2	NA	NA	rs710834	0.5	0.5	0.468	0.55651	0.3678	0.5516	0.3588	0.7292	0.6626	0.38	0.58	0.36	0.71	0.4391	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.56347	2.56347	NA	0.346008	0.62202	NA	0.493	NA	5.5137586
1101	14	106805408	106805408	C	T	intergenic	LINC00226,LINC00221	dist=60442;dist=133047	NA	NA	exonic	ENSG00000231475	NA	nonsynonymous SNV	ENSG00000231475:ENST00000438142:exon2:c.G155A:p.G52D	NA	NA	14q32.33	NA	Name=KAP1	NA	NA	rs61995642	0.22	0.22	0.244	NA	NA	NA	NA	NA	NA	0.22	0.17	0.2	0.3	0.3198	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.726411	NA	0.45	NA	NA	NA	0.116	NA	5.5135334
1101	X	207362	207362	C	T	exonic	PLCXD1	NA	synonymous SNV	PLCXD1:NM_018390:exon4:c.C312T:p.D104D	exonic	ENSG00000182378	NA	synonymous SNV	ENSG00000182378:ENST00000448477:exon3:c.C312T:p.D104D,ENSG00000182378:ENST00000381657:exon4:c.C312T:p.D104D,ENSG00000182378:ENST00000381663:exon4:c.C312T:p.D104D,ENSG00000182378:ENST00000415337:exon4:c.C312T:p.D104D,ENSG00000182378:ENST00000430923:exon4:c.C312T:p.D104D,ENSG00000182378:ENST00000447472:exon4:c.C312T:p.D104D,ENSG00000182378:ENST00000399012:exon5:c.C312T:p.D104D	Score=518;Name=lod=170	NA	Xp22.33	NA	NA	NA	NA	rs11556996	0.57	0.57	0.58188	NA	NA	NA	NA	NA	NA	0.59	0.75	0.53	0.35	0.5661	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.191585	NA	NA	0.587407	0.364957	NA	0.623	NA	5.5131596
1101	4	154553973	154553973	G	A	exonic	KIAA0922	NA	synonymous SNV	KIAA0922:NM_001131007:exon32:c.G4311A:p.S1437S,KIAA0922:NM_015196:exon32:c.G4308A:p.S1436S	exonic	ENSG00000121210	NA	synonymous SNV	ENSG00000121210:ENST00000240487:exon26:c.G3642A:p.S1214S,ENSG00000121210:ENST00000440693:exon30:c.G4059A:p.S1353S,ENSG00000121210:ENST00000409663:exon32:c.G4308A:p.S1436S,ENSG00000121210:ENST00000409959:exon32:c.G4311A:p.S1437S	NA	NA	4q31.3	NA	NA	NA	NA	rs35897141	0.02	0.02	0.02	0.0161741	0.0408	NA	0.0259	0.0053	0.0153	0.05	NA	0.03	0.01	0.0431	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.263839	NA	NA	0.069651	0.012483	NA	0.007	NA	5.5131156
1101	17	72357805	72357805	C	T	intronic	BTBD17	NA	NA	NA	intronic	ENSG00000204347	NA	NA	NA	NA	NA	17q25.1	NA	Name=ERalpha_a,CTCF_(SC-5916),TBP,CTCF_(C-20),NRSF,SMC3_(ab9263),GABP,CTCF,Rad21	Name=55	NA	rs12939498	0.36	0.36	0.329	0.336861	0.4871	0.3909	0.4597	0.0348	0.4479	0.49	0.41	0.43	0.04	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.126322	NA	0	NA	NA	NA	0.333	NA	5.5129
1101	11	125848261	125848261	C	T	exonic	CDON	NA	synonymous SNV	CDON:NM_001243597:exon18:c.G3294A:p.T1098T,CDON:NM_016952:exon18:c.G3294A:p.T1098T	exonic	ENSG00000064309	NA	synonymous SNV	ENSG00000064309:ENST00000531738:exon9:c.G1425A:p.T475T,ENSG00000064309:ENST00000263577:exon18:c.G3294A:p.T1098T,ENSG00000064309:ENST00000392693:exon18:c.G3294A:p.T1098T	Score=395;Name=lod=54	NA	11q24.2	NA	NA	NA	NA	rs3740904	0.43	0.43	0.392	0.399561	0.3797	0.4127	0.4337	0.382	0.4059	0.37	0.45	0.49	0.44	0.4143	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.835235	NA	NA	0.360549	0.348478	ID=COSM147373;OCCURENCE=1(stomach)	0.449	NA	5.5121176
1101	1	16352937	16352937	G	A	intronic	CLCNKA	NA	NA	NA	intronic	ENSG00000186510	NA	NA	NA	NA	NA	1p36.13	NA	Name=Rad21	Name=3	NA	rs1010069	0.58	0.58	0.618	0.598243	0.4881	0.7619	0.4035	0.6717	0.5818	0.48	0.74	0.43	0.67	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.063367	NA	NA	NA	NA	NA	0.587	NA	5.5119
1101	10	134234279	134234279	C	T	intergenic	PWWP2B,C10orf91	dist=2921;dist=24435	NA	NA	ncRNA_exonic	ENSG00000231705	NA	NA	NA	NA	NA	10q26.3	NA	Name=Ini1,PU.1	Name=8	NA	rs7909340	0.46	0.46	0.459	0.427316	0.4881	0.6587	0.3242	0.2368	0.4571	0.47	0.67	0.35	0.25	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.489257	NA	NA	NA	NA	NA	0.5	NA	5.5119
1101	17	76135412	76135412	G	T	intronic	TMC8	NA	NA	NA	intronic	ENSG00000167895	NA	NA	NA	NA	NA	17q25.3	NA	Name=Pol2	Name=18	NA	rs17773854	0.38	0.38	0.359	0.366414	0.4881	0.2312	0.3718	0.3729	0.3681	0.49	0.24	0.44	0.35	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.184553	NA	NA	NA	NA	NA	0.37	NA	5.5119
1101	5	140594442	140594442	A	G	exonic	PCDHB13	NA	synonymous SNV	PCDHB13:NM_018933:exon1:c.A747G:p.R249R	exonic	ENSG00000187372	NA	synonymous SNV	ENSG00000187372:ENST00000341948:exon1:c.A747G:p.R249R	NA	NA	5q31.3	NA	NA	NA	NA	rs3822332	NA	NA	0.065	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.1551	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.5488	1.5488	NA	NA	NA	NA	NA	NA	5.5115666
1101	7	23296533	23296533	G	A	exonic	GPNMB	NA	synonymous SNV	GPNMB:NM_001005340:exon4:c.G390A:p.P130P,GPNMB:NM_002510:exon4:c.G390A:p.P130P	exonic	ENSG00000136235	NA	synonymous SNV	ENSG00000136235:ENST00000539136:exon2:c.G93A:p.P31P,ENSG00000136235:ENST00000258733:exon4:c.G390A:p.P130P,ENSG00000136235:ENST00000381990:exon4:c.G390A:p.P130P,ENSG00000136235:ENST00000409458:exon4:c.G390A:p.P130P	NA	NA	7p15.3	NA	Name=GATA2_(CG2-96),TAL1_(SC-12984)	NA	NA	rs199355	0.36	0.36	0.357	0.366214	0.3767	0.129	0.3617	0.5371	0.3722	0.36	0.13	0.38	0.58	0.3703	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.413079	NA	NA	0.408256	0.485701	NA	0.319	NA	5.5114106
1101	1	201754528	201754528	T	C	ncRNA_intronic	RNU6-79P	NA	NA	NA	ncRNA_intronic	ENSG00000231871	NA	NA	NA	NA	NA	1q32.1	NA	Name=STAT3	NA	NA	rs16849345	0.05	0.05	0.051	0.0553115	0.0547	0.001	0.0562	0.1271	0.0143	0.05	NA	0.05	0.08	0.0458	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.50686	NA	NA	0.054767	0.105311	NA	0.043	NA	5.5113996
1101	7	7413149	7413149	T	C	exonic	COL28A1	NA	synonymous SNV	COL28A1:NM_001037763:exon32:c.A2388G:p.P796P	exonic	ENSG00000215018	NA	synonymous SNV	ENSG00000215018:ENST00000399429:exon32:c.A2388G:p.P796P	NA	NA	7p21.3	NA	NA	NA	NA	rs61744841	0.09	0.09	0.106	0.109625	0.0487	0.001	0.0418	0.3389	0.0225	0.04	NA	0.03	0.32	0.0585	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.087136	NA	NA	0.048182	0.282154	NA	0.123	NA	5.5112846
1101	11	124179835	124179835	C	T	exonic	OR8D1	NA	synonymous SNV	OR8D1:NM_001002917:exon1:c.G828A:p.V276V	exonic	ENSG00000196341	NA	synonymous SNV	ENSG00000196341:ENST00000357821:exon1:c.G828A:p.V276V	NA	NA	11q24.2	Score=895;Name=V$GR_Q6	NA	NA	NA	rs4936918	0.34	0.34	0.294	0.28754	0.4066	0.4167	0.3429	0.1626	0.1616	0.39	0.42	0.37	0.14	0.3554	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.470242	NA	NA	0.39358	0.213766	NA	0.203	NA	5.5110866
1101	15	65108707	65108707	G	C	intronic	PIF1	NA	NA	NA	intronic	ENSG00000140451	NA	NA	NA	NA	NA	15q22.31	NA	Name=CTCF	Name=3	NA	rs7180207	0.31	0.31	0.296	0.284145	0.4891	0.1101	0.2622	0.2852	0.2669	0.48	0.08	0.3	0.32	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.941972	NA	NA	NA	NA	NA	0.406	NA	5.5109
1101	14	73963383	73963383	T	C	exonic	HEATR4	NA	synonymous SNV	HEATR4:NM_203309:exon14:c.A2547G:p.K849K,HEATR4:NM_001220484:exon15:c.A2547G:p.K849K	exonic	ENSG00000187105	NA	synonymous SNV	ENSG00000187105:ENST00000334988:exon14:c.A2547G:p.K849K,ENSG00000187105:ENST00000560393:exon14:c.A2406G:p.K802K,ENSG00000187105:ENST00000553558:exon15:c.A2547G:p.K849K	Score=336;Name=lod=31	NA	14q24.3	Score=757;Name=V$STAT3_01	NA	NA	NA	rs8014577	0.8	0.8	0.812	0.809704	0.7127	0.8353	0.8112	0.9221	0.7301	0.71	0.84	0.79	0.92	0.7444	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.04544	NA	NA	0.698813	0.886745	NA	0.775	NA	5.5107536
1101	2	119915249	119915249	T	C	exonic	C1QL2	NA	synonymous SNV	C1QL2:NM_182528:exon1:c.A597G:p.V199V	exonic	ENSG00000144119	NA	synonymous SNV	ENSG00000144119:ENST00000272520:exon1:c.A597G:p.V199V	Score=670;Name=lod=706	NA	2q14.2	NA	Name=SUZ12	NA	NA	rs7556873	0.6	0.6	0.574	0.586462	0.7137	0.3562	0.7695	0.5787	0.5736	0.7	0.36	0.76	0.59	0.6894	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.320336	1.320336	NA	0.753023	0.616205	NA	0.616	NA	5.5105436
1101	8	23186007	23186007	T	C	exonic	LOXL2	NA	synonymous SNV	LOXL2:NM_002318:exon6:c.A1038G:p.E346E	exonic	ENSG00000134013	NA	synonymous SNV	ENSG00000134013:ENST00000389131:exon6:c.A1038G:p.E346E	Score=535;Name=lod=199	NA	8p21.3	NA	NA	NA	NA	rs1051146	0.58	0.58	0.556	0.567093	0.7505	0.506	0.5274	0.4531	0.6237	0.75	0.47	0.59	0.46	0.6672	0.75	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	-0.980	T	0.000	T	.	1.597	11.3	-1.42	-0.190	-0.127	11.276	1.597442	1.597442	NA	0.738721	0.497503	NA	0.645	NA	5.5102456
1101	20	5283376	5283376	G	A	exonic	PROKR2	NA	synonymous SNV	PROKR2:NM_144773:exon2:c.C465T:p.L155L	exonic	ENSG00000101292	NA	synonymous SNV	ENSG00000101292:ENST00000217270:exon2:c.C465T:p.L155L,ENSG00000101292:ENST00000546004:exon3:c.C465T:p.L155L	Score=428;Name=lod=73	NA	20p12.3	NA	NA	NA	NA	rs3746684	0.42	0.42	0.421	0.446486	0.3738	0.504	0.4222	0.4675	0.4509	0.37	0.48	0.41	0.44	0.398	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.36921	NA	NA	0.384767	0.457104	NA	0.362	NA	5.5100996
1101	5	36171780	36171780	A	G	exonic	SKP2	NA	synonymous SNV	SKP2:NM_001243120:exon5:c.A204G:p.S68S,SKP2:NM_005983:exon7:c.A846G:p.S282S,SKP2:NM_032637:exon7:c.A846G:p.S282S	exonic	ENSG00000145604	NA	synonymous SNV	ENSG00000145604:ENST00000546211:exon5:c.A204G:p.S68S,ENSG00000145604:ENST00000513151:exon6:c.A711G:p.S237S,ENSG00000145604:ENST00000274254:exon7:c.A846G:p.S282S,ENSG00000145604:ENST00000274255:exon7:c.A846G:p.S282S	NA	NA	5p13.2	NA	NA	NA	NA	rs61755301	0.07	0.07	0.054	0.0623003	0.0557	0.1736	0.0937	0.0045	0.0102	0.04	0.17	0.07	0.01	0.052	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.352298	NA	NA	0.04907	0.010894	NA	0.029	NA	5.5098966
1101	9	33676027	33676027	C	A	ncRNA_exonic	PTENP1	NA	NA	NA	ncRNA_exonic	ENSG00000237984	NA	NA	NA	Score=861;Name=lod=4212	NA	9p13.3	NA	NA	NA	NA	rs855465	0.1	0.1	0.107	0.129393	0.0636	0.0258	0.0663	0.2534	0.181	0.07	0.02	0.07	0.25	0.0932	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.172556	NA	NA	NA	NA	NA	0.116	NA	5.5098666
1101	9	127643456	127643456	T	C	exonic	GOLGA1	NA	synonymous SNV	GOLGA1:NM_002077:exon22:c.A2217G:p.E739E	exonic	ENSG00000136935	NA	synonymous SNV	ENSG00000136935:ENST00000373555:exon22:c.A2217G:p.E739E	Score=556;Name=lod=243	NA	9q33.3	NA	NA	NA	NA	rs687434	0.33	0.33	0.332	0.301917	0.4036	0.3433	0.3242	0.2148	0.2566	0.38	0.35	0.33	0.24	0.3484	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.098153	NA	NA	0.405465	0.236042	NA	0.326	NA	5.5092016
1101	1	155006999	155006999	C	T	exonic	DCST1	NA	synonymous SNV	DCST1:NM_001143687:exon3:c.C150T:p.L50L,DCST1:NM_152494:exon3:c.C150T:p.L50L	exonic	ENSG00000163357	NA	synonymous SNV	ENSG00000163357:ENST00000368419:exon2:c.C150T:p.L50L,ENSG00000163357:ENST00000295542:exon3:c.C150T:p.L50L,ENSG00000163357:ENST00000392480:exon3:c.C150T:p.L50L,ENSG00000163357:ENST00000423025:exon3:c.C150T:p.L50L,ENSG00000163357:ENST00000525273:exon3:c.C225T:p.L75L	Score=395;Name=lod=54	NA	1q22	NA	NA	NA	NA	rs6680600	0.54	0.54	0.506	0.565695	0.3579	0.8819	0.5922	0.4266	0.6227	0.36	0.9	0.54	0.41	0.4552	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.389443	1.389443	NA	0.344419	0.430549	NA	0.464	NA	5.5091476
1101	16	74372302	74372302	C	T	ncRNA_intronic	LOC283922	NA	NA	NA	ncRNA_exonic	ENSG00000214331	NA	NA	NA	NA	NA	16q23.1	Score=888;Name=V$NKX3A_01	NA	NA	NA	rs2549259	NA	NA	0.104	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.1579	0.076	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.950343	NA	NA	NA	NA	ID=COSN165260;OCCURENCE=1(breast)	0.051	NA	5.5087666
1101	6	150202033	150202033	A	C	ncRNA_intronic	LOC100652739	NA	NA	NA	ncRNA_exonic	ENSG00000217733	NA	NA	NA	Score=821;Name=lod=2880	NA	6q25.1	NA	NA	NA	NA	rs9397053	0.24	0.24	0.237	0.237819	0.1581	0.5526	0.1196	0.115	0.2454	0.15	0.55	0.13	0.1	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.585481	NA	NA	NA	NA	NA	0.275	NA	5.5085666
1101	11	60698054	60698054	G	A	exonic	TMEM132A	NA	synonymous SNV	TMEM132A:NM_017870:exon5:c.G939A:p.L313L,TMEM132A:NM_178031:exon5:c.G939A:p.L313L	exonic	ENSG00000006118	NA	synonymous SNV	ENSG00000006118:ENST00000005286:exon5:c.G939A:p.L313L,ENSG00000006118:ENST00000453848:exon5:c.G939A:p.L313L,ENSG00000006118:ENST00000544065:exon5:c.G153A:p.L51L	Score=491;Name=lod=132	NA	11q12.2	NA	NA	NA	NA	rs2074416	0.32	0.32	0.307	0.296126	0.3897	0.3204	0.3862	0.0961	0.3814	0.39	0.33	0.4	0.12	0.3678	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.136407	NA	NA	0.400791	0.150023	NA	0.341	NA	5.5083756
1101	9	660290	660290	G	A	intronic	KANK1	NA	NA	NA	ncRNA_exonic	ENSG00000229875	NA	NA	NA	Score=592;Name=lod=341	NA	9p24.3	NA	NA	Name=11	NA	rs9407340	0.85	0.85	0.824	0.860423	0.825	0.9692	0.8818	0.7436	0.9274	0.83	0.96	0.85	0.73	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.041126	NA	NA	NA	NA	NA	0.862	NA	5.5083333
1101	2	21265141	21265141	C	A	intronic	APOB	NA	NA	NA	intronic	ENSG00000084674	NA	NA	NA	NA	NA	2p24.1	NA	Name=FOSL2,HSF1,PGC1A,HNF4A_(H-171),FOXA1_(C-20),SP1,Pol2,HNF4A,TCF4,Sin3Ak-20,GATA-2,HDAC2_(SC-6296),FOXA2_(SC-6554),HEY1,FOXA1_(SC-101058),HNF4G_(SC-6558),BHLHE40,p300,TBP,RXRA	Name=37	NA	rs661665	0.55	0.55	0.519	0.563299	0.492	0.879	0.5331	0.2678	0.7321	0.5	0.87	0.52	0.27	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.422688	NA	NA	NA	NA	NA	0.522	NA	5.508
1101	6	150202646	150202646	C	T	ncRNA_intronic	LOC100652739	NA	NA	NA	ncRNA_exonic	ENSG00000217733	NA	NA	NA	Score=749;Name=lod=1481	NA	6q25.1	NA	NA	NA	NA	rs6908862	0.24	0.24	0.039	0.242212	0.159	0.5516	0.1196	0.1316	0.2454	0.15	0.54	0.13	0.13	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.675662	NA	NA	NA	NA	NA	NA	NA	5.5076666
1101	6	29855733	29855733	C	T	ncRNA_exonic	HLA-H	NA	NA	NA	ncRNA_exonic	ENSG00000206341,ENSG00000230521	NA	NA	NA	Score=317;Name=lod=26	NA	6p22.1	NA	NA	NA	NA	rs62389356	0.08	0.08	0.048	0.101038	0.0626	0.2321	0.0476	0.0015	0.1779	0.06	0.2	0.05	0.002	0.0965	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.32976	NA	NA	NA	NA	NA	0.08	NA	5.5075666
1101	14	20864049	20864049	A	G	exonic	TEP1	NA	synonymous SNV	TEP1:NM_007110:exon11:c.T1719C:p.I573I	exonic	ENSG00000129566	NA	synonymous SNV	ENSG00000129566:ENST00000556935:exon9:c.T1395C:p.I465I,ENSG00000129566:ENST00000262715:exon11:c.T1719C:p.I573I,ENSG00000129566:ENST00000555727:exon11:c.T1719C:p.I573I	NA	NA	14q11.2	NA	NA	NA	NA	rs2228026	0.03	0.03	0.027	0.0297524	0.0557	NA	0.0274	0.003	0.0716	0.06	NA	0.04	NA	0.0485	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.411037	NA	NA	0.055116	0.01044	NA	0.007	NA	5.5073506
1101	10	119003564	119003564	T	G	exonic	SLC18A2	NA	synonymous SNV	SLC18A2:NM_003054:exon3:c.T204G:p.T68T	exonic	ENSG00000165646	NA	synonymous SNV	ENSG00000165646:ENST00000298472:exon3:c.T204G:p.T68T	NA	NA	10q25.3	NA	NA	NA	NA	rs363387	0.09	0.09	0.074	0.0840655	0.0447	0.1151	0.1902	0.0772	0.0266	0.04	0.1	0.18	0.08	0.0712	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.210201	NA	NA	0.044884	0.065592	NA	0.116	NA	5.5058826
1101	1	21043913	21043913	T	C	intronic	KIF17	NA	NA	NA	UTR5	ENSG00000117245	ENST00000375044:c.-1850A>G	NA	NA	NA	NA	1p36.12	NA	Name=GATA-2,E2F6,Max,ZBTB7A_(SC-34508)	Name=22	NA	rs604659	0.69	0.69	0.627	0.670727	0.661	0.8601	0.5937	0.5522	0.7004	0.66	0.87	0.58	0.61	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.117796	NA	NA	NA	NA	NA	0.435	NA	5.5056667
1101	2	105011965	105011965	A	G	ncRNA_intronic	LOC100287010	NA	NA	NA	ncRNA_exonic	ENSG00000233955	NA	NA	NA	Score=787;Name=lod=2097	NA	2q12.1	NA	NA	NA	NA	rs11902939	0.34	0.34	0.324	0.358427	0.161	0.3938	0.2666	0.6573	0.1861	0.15	0.39	0.24	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.033182	NA	NA	NA	NA	NA	0.406	NA	5.5056666
1101	2	234763225	234763225	T	C	upstream	HJURP	NA	NA	NA	upstream	ENSG00000123485	NA	NA	NA	NA	NA	2q37.1	NA	Name=TBP,IRF1,HEY1,ELF1_(SC-631),IRF3,NF-YB,Oct-2,SETDB1,SP1,Pol2,TAF7_(SQ-8),Sin3Ak-20,HA-E2F1,Pol2-4H8,c-Fos,E2F1,TAF1,Pol2(b),NF-YA,ELK4,POU2F2,E2F4	Name=148	NA	rs622954	0.1	0.1	NA	0.100639	0.161	0.0526	0.1196	0.0734	0.1115	0.13	0.05	0.12	0.09	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.480942	NA	NA	NA	NA	NA	NA	NA	5.5056666
1102	12	96066092	96066092	C	A	ncRNA_exonic	PGAM1P5	NA	NA	NA	ncRNA_exonic	ENSG00000257150	NA	NA	NA	Score=763;Name=lod=1683	NA	12q22	NA	NA	NA	NA	rs78920805	0.1	0.1	0.119	0.102636	0.162	0.1071	0.062	0.0091	0.1922	0.17	0.12	0.08	0.0041	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.488424	NA	NA	NA	NA	NA	0.036	NA	5.5046666
1102	4	113351822	113351822	G	A	exonic	ALPK1	NA	synonymous SNV	ALPK1:NM_001253884:exon10:c.G885A:p.G295G,ALPK1:NM_001102406:exon11:c.G1119A:p.G373G,ALPK1:NM_025144:exon11:c.G1119A:p.G373G	exonic	ENSG00000073331	NA	synonymous SNV	ENSG00000073331:ENST00000504176:exon10:c.G885A:p.G295G,ENSG00000073331:ENST00000177648:exon11:c.G1119A:p.G373G,ENSG00000073331:ENST00000458497:exon11:c.G1119A:p.G373G	NA	NA	4q25	NA	NA	NA	NA	rs61747381	0.03	0.03	0.012	0.0383387	0.0447	0.001	0.1081	0.0023	0.0695	0.04	NA	0.09	0.01	0.0622	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.305416	NA	NA	0.055465	0.011575	NA	0.08	NA	5.5043016
1102	19	1364306	1364306	A	G	intronic	MUM1	NA	NA	NA	intronic	ENSG00000160953	NA	NA	NA	NA	NA	19p13.3	NA	Name=EBF1_(C-8),TCF12,EBF	Name=2	NA	rs17673260	0.38	0.38	0.361	0.357029	0.496	0.4067	0.4135	0.1188	0.4448	0.5	0.41	0.45	0.12	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.37093	NA	NA	NA	NA	NA	0.297	NA	5.504
1102	16	65022114	65022114	C	T	exonic	CDH11	NA	synonymous SNV	CDH11:NM_001797:exon7:c.G945A:p.S315S	exonic	ENSG00000140937	NA	synonymous SNV	ENSG00000140937:ENST00000566827:exon6:c.G567A:p.S189S,ENSG00000140937:ENST00000268603:exon7:c.G945A:p.S315S,ENSG00000140937:ENST00000394156:exon7:c.G945A:p.S315S	Score=531;Name=lod=191	NA	16q21	NA	NA	NA	NA	rs28216	0.27	0.27	0.241	0.223642	0.4066	0.2054	0.255	0.0734	0.2352	0.4	0.23	0.31	0.07	0.3306	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.171768	NA	NA	0.425581	0.120291	NA	0.196	NA	5.5038856
1102	3	75477174	75477174	C	T	ncRNA_intronic	FAM86DP	NA	NA	NA	ncRNA_intronic	ENSG00000244026	NA	NA	NA	NA	NA	3p12.3	NA	NA	Name=31	NA	rs35559783	0.09	0.09	0.053	0.0700879	0.163	0.0179	0.1427	0.0098	0.0583	0.16	0.02	0.13	0.02	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.247795	NA	NA	NA	NA	NA	0.145	NA	5.5036666
1102	6	30227397	30227397	C	T	ncRNA_exonic	HLA-L	NA	NA	NA	ncRNA_exonic	ENSG00000243753	NA	NA	NA	NA	NA	6p22.1	NA	Name=TBP,HEY1,ELF1_(SC-631),c-Fos,Pol2-4H8,ZNF263,SP1,RFX5_(N-494),Pol2,TAF1	NA	NA	rs9391806	0.22	0.22	0.169	0.233027	0.163	0.4435	0.3156	0.0144	0.3252	0.16	0.42	0.27	0.03	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.634701	NA	NA	NA	NA	NA	0.275	NA	5.5036666
1102	9	95599825	95599825	G	A	ncRNA_exonic	ANKRD19P	NA	NA	NA	ncRNA_exonic	ENSG00000187984,ENSG00000226721	NA	NA	NA	Score=489;Name=lod=130	NA	9q22.31	NA	NA	NA	NA	rs7045305	0.24	0.24	0.216	0.236621	0.163	0.12	0.3386	0.4092	0.1268	0.15	0.12	0.35	0.44	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.718287	NA	NA	NA	NA	NA	0.232	NA	5.5036666
1102	19	52856955	52856955	C	T	exonic	ZNF610	NA	synonymous SNV	ZNF610:NM_001161425:exon4:c.C84T:p.D28D,ZNF610:NM_001161426:exon4:c.C84T:p.D28D,ZNF610:NM_001161427:exon4:c.C84T:p.D28D,ZNF610:NM_173530:exon4:c.C84T:p.D28D	exonic	ENSG00000167554	NA	synonymous SNV	ENSG00000167554:ENST00000321287:exon4:c.C84T:p.D28D,ENSG00000167554:ENST00000327920:exon4:c.C84T:p.D28D,ENSG00000167554:ENST00000403906:exon4:c.C84T:p.D28D,ENSG00000167554:ENST00000593698:exon4:c.C84T:p.D28D,ENSG00000167554:ENST00000601151:exon4:c.C84T:p.D28D	Score=346;Name=lod=34	NA	19q13.41	NA	NA	NA	NA	rs1961205	0.37	0.37	0.387	0.413938	0.3926	0.4504	0.3357	0.3903	0.4857	0.39	0.42	0.34	0.33	0.3915	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.036202	NA	NA	0.378953	0.411938	ID=COSM148718;OCCURENCE=1(stomach)	0.377	NA	5.5036136
1102	11	123468800	123468800	T	C	intronic	GRAMD1B	NA	NA	NA	ncRNA_exonic	ENSG00000254449	NA	NA	NA	Score=844;Name=lod=3572	NA	11q24.1	NA	Name=CTCF	NA	NA	rs1148098	0.87	0.87	0.862	0.872005	0.83	0.997	0.8646	0.767	0.9335	0.83	1	0.84	0.79	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.379603	NA	NA	NA	NA	NA	0.928	NA	5.5033333
1102	11	123468933	123468933	A	G	intronic	GRAMD1B	NA	NA	NA	ncRNA_exonic	ENSG00000254449	NA	NA	NA	Score=844;Name=lod=3572	NA	11q24.1	NA	Name=CTCF	NA	NA	rs1148097	0.87	0.87	0.857	0.872204	0.83	0.997	0.8646	0.7678	0.9335	0.83	1	0.84	0.79	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.589201	NA	NA	NA	NA	NA	0.928	NA	5.5033333
1102	11	123468965	123468965	A	G	intronic	GRAMD1B	NA	NA	NA	ncRNA_exonic	ENSG00000254449	NA	NA	NA	Score=844;Name=lod=3572	NA	11q24.1	NA	Name=CTCF	NA	NA	rs1709905	0.87	0.87	0.84	0.872204	0.83	0.997	0.8646	0.7678	0.9335	0.83	1	0.84	0.79	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.531022	NA	NA	NA	NA	NA	0.928	NA	5.5033333
1102	11	123468969	123468969	A	T	intronic	GRAMD1B	NA	NA	NA	ncRNA_exonic	ENSG00000254449	NA	NA	NA	Score=844;Name=lod=3572	NA	11q24.1	NA	Name=CTCF	NA	NA	rs1791721	0.87	0.87	NA	0.872204	0.83	0.997	0.8646	0.7678	0.9335	0.83	1	0.84	0.79	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.341522	NA	NA	NA	NA	NA	0.928	NA	5.5033333
1102	5	145246085	145246085	T	G	exonic	GRXCR2	NA	nonsynonymous SNV	GRXCR2:NM_001080516:exon2:c.A543C:p.L181F	exonic	ENSG00000204928	NA	nonsynonymous SNV	ENSG00000204928:ENST00000377976:exon2:c.A543C:p.L181F	NA	NA	5q32	NA	NA	NA	NA	rs2569006	0.7	0.7	0.704	0.754393	0.5845	0.7262	0.732	0.9032	0.773	0.58	0.7	0.69	0.91	0.6658	0.91	1	T	0.0	B	0.0	B	0.245	N	1.000	P	-1.01	N	0.43	T	-0.985	T	0.000	T	0.036	-0.085	3.586	0.077	-0.154	-0.877	6.431	-0.084576	NA	0.52	0.579884	0.838629	NA	0.833	NA	5.5031494
1102	4	125592440	125592440	T	C	exonic	ANKRD50	NA	synonymous SNV	ANKRD50:NM_001167882:exon3:c.A1455G:p.L485L,ANKRD50:NM_020337:exon4:c.A1992G:p.L664L	exonic	ENSG00000151458	NA	synonymous SNV	ENSG00000151458:ENST00000515641:exon3:c.A1455G:p.L485L,ENSG00000151458:ENST00000504087:exon4:c.A1992G:p.L664L	NA	NA	4q28.1	NA	NA	NA	NA	rs3733472	0.04	0.04	0.044	0.0427316	0.0497	0.0208	0.0389	0.0492	0.0521	0.04	0.03	0.04	0.04	0.056	0.065	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.954224	NA	NA	0.057907	0.048797	NA	0.072	NA	5.5030596
1102	3	75471230	75471230	C	T	ncRNA_exonic	FAM86DP	NA	NA	NA	ncRNA_exonic	ENSG00000238278,ENSG00000244026	NA	NA	NA	Score=513;Name=lod=162	NA	3p12.3	NA	NA	NA	NA	rs11716994	0.14	0.14	0.125	0.131989	0.164	0.0188	0.1599	0.2337	0.0583	0.16	0.02	0.14	0.25	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.630086	NA	NA	NA	NA	NA	0.167	NA	5.5026666
1102	5	79596209	79596209	C	T	ncRNA_exonic	LOC644936	NA	NA	NA	ncRNA_exonic	ENSG00000184188	NA	NA	NA	Score=859;Name=lod=4113	NA	5q14.1	NA	NA	NA	NA	rs11747861	0.15	0.15	0.147	0.147963	0.164	NA	0.1326	0.2806	0.1155	0.16	NA	0.16	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.562693	NA	NA	NA	NA	NA	0.159	NA	5.5026666
1102	21	47542779	47542779	C	T	intronic	COL6A2	NA	NA	NA	intronic	ENSG00000142173	NA	NA	NA	NA	NA	21q22.3	Score=892;Name=V$MEIS1_01	NA	NA	NA	rs17357592	0.09	0.09	0.097	0.0734824	0.1889	0.0258	0.0677	0.031	0.0654	0.18	0.03	0.07	0.04	0.1211	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.35986	NA	NA	0.187762	0.056287	NA	0.203	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000079852.3;CLNDSDB=.;CLNDSDBID=.	5.502238
1102	5	81574182	81574182	C	T	UTR5	RPS23	NM_001025:c.-40G>A	NA	NA	UTR5	ENSG00000186468	ENST00000296674:c.-40G>A,ENST00000510019:c.-40G>A	NA	NA	NA	NA	5q14.2	NA	Name=MEF2A,Pol2-4H8,YY1_(C-20),Sin3Ak-20,TAF7_(SQ-8),BCLAF1_(M33-P5B11),Pol2(phosphoS2),YY1,Pol2,Mxi1_(bHLH),SP1,NRSF,GABP,HMGN3,POU2F2,ELK4,Znf143_(16618-1-AP),TAF1,Pol2(b),E2F6_(H-50),IRF1,GTF2F1_(RAP-74),TBP,TCF12,Oct-2,PAX5-C20,ELF1_(SC-631),HEY1,Max,CCNT2,c-Myc	Name=148	NA	rs6880209	0.23	0.23	0.206	0.230232	0.2982	0.0883	0.2133	0.3623	0.1401	0.29	0.07	0.24	0.31	0.2523	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.404002	NA	NA	0.280644	0.329442	NA	0.188	NA	5.5021894
1102	8	144997656	144997656	C	T	exonic	PLEC	NA	synonymous SNV	PLEC:NM_201378:exon31:c.G6399A:p.A2133A,PLEC:NM_201379:exon31:c.G6375A:p.A2125A,PLEC:NM_201380:exon31:c.G6852A:p.A2284A,PLEC:NM_201381:exon31:c.G6345A:p.A2115A,PLEC:NM_201382:exon31:c.G6441A:p.A2147A,PLEC:NM_201383:exon31:c.G6453A:p.A2151A,PLEC:NM_201384:exon31:c.G6441A:p.A2147A,PLEC:NM_000445:exon32:c.G6522A:p.A2174A	exonic	ENSG00000178209	NA	synonymous SNV	ENSG00000178209:ENST00000322810:exon31:c.G6852A:p.A2284A,ENSG00000178209:ENST00000345136:exon31:c.G6441A:p.A2147A,ENSG00000178209:ENST00000354589:exon31:c.G6441A:p.A2147A,ENSG00000178209:ENST00000354958:exon31:c.G6375A:p.A2125A,ENSG00000178209:ENST00000356346:exon31:c.G6399A:p.A2133A,ENSG00000178209:ENST00000357649:exon31:c.G6453A:p.A2151A,ENSG00000178209:ENST00000398774:exon31:c.G6345A:p.A2115A,ENSG00000178209:ENST00000527096:exon31:c.G6510A:p.A2170A,ENSG00000178209:ENST00000436759:exon32:c.G6522A:p.A2174A	NA	NA	8q24.3	NA	NA	NA	NA	rs7016416	0.25	0.25	0.228	0.230232	0.4245	0.1429	0.2954	0.028	0.3476	0.42	0.16	0.3	0.03	0.3535	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.860274	NA	NA	0.386545	0.085322	ID=COSM454191,COSM454190,COSM1489104;OCCURENCE=1(breast)	0.254	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000078888.3;CLNDSDB=.;CLNDSDBID=.	5.5021216
1102	16	24583406	24583406	A	G	exonic	RBBP6	NA	synonymous SNV	RBBP6:NM_018703:exon17:c.A4917G:p.A1639A,RBBP6:NM_006910:exon18:c.A5019G:p.A1673A	exonic	ENSG00000122257	NA	synonymous SNV	ENSG00000122257:ENST00000381039:exon11:c.A2499G:p.A833A,ENSG00000122257:ENST00000348022:exon17:c.A4917G:p.A1639A,ENSG00000122257:ENST00000319715:exon18:c.A5019G:p.A1673A	Score=349;Name=lod=35	NA	16p12.1	NA	NA	NA	NA	rs7593	0.31	0.31	0.308	0.311302	0.4095	0.0893	0.3343	0.3464	0.3753	0.41	0.1	0.36	0.38	0.3561	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.314908	NA	NA	0.398953	0.367091	NA	0.377	NA	5.5021136
1102	3	125642534	125642534	T	G	ncRNA_intronic	FAM86JP	NA	NA	NA	ncRNA_exonic	ENSG00000171084	NA	NA	NA	Score=523;Name=lod=178	NA	3q21.2	NA	NA	NA	NA	rs13074445	0.21	0.21	0.137	0.26238	0.165	0.1012	0.1787	0.5893	0.1462	0.14	0.09	0.17	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.489458	NA	NA	NA	NA	NA	0.014	NA	5.5016666
1102	10	73544638	73544638	A	G	intronic	CDH23	NA	NA	NA	intronic	ENSG00000107736	NA	NA	NA	NA	NA	10q22.1	NA	Name=ZNF263	NA	NA	rs2394839	0.18	0.18	0.133	0.183506	0.1481	0.2976	0.2378	0.0522	0.2413	0.14	0.32	0.21	0.06	0.1915	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.664598	NA	NA	0.159374	0.068374	ID=COSM146952;OCCURENCE=1(stomach)	0.203	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000039217.1;CLNDSDB=.;CLNDSDBID=.	5.501026
1102	19	48832554	48832554	A	G	intronic	EMP3	NA	NA	NA	intronic	ENSG00000142227	NA	NA	NA	NA	NA	19q13.33	NA	Name=Pol2,Pol2-4H8,USF-1	Name=3	NA	rs8102349	0.46	0.46	0.467	0.469449	0.499	0.3482	0.4712	0.6097	0.3732	0.47	0.31	0.5	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.912936	NA	NA	NA	NA	NA	0.601	NA	5.501
1102	22	32756555	32756555	G	C	exonic	RFPL3	NA	synonymous SNV	RFPL3:NM_001098535:exon2:c.G690C:p.T230T,RFPL3:NM_006604:exon3:c.G603C:p.T201T	exonic	ENSG00000128276	NA	synonymous SNV	ENSG00000128276:ENST00000249007:exon2:c.G690C:p.T230T,ENSG00000128276:ENST00000382088:exon2:c.G603C:p.T201T,ENSG00000128276:ENST00000397468:exon3:c.G603C:p.T201T	NA	NA	22q12.3	NA	NA	NA	NA	rs136471	0.16	0.16	0.157	0.155751	0.0636	0.4603	0.0951	0.0469	0.1268	0.05	0.45	0.1	0.03	0.1024	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.497147	NA	NA	NA	NA	NA	0.065	NA	5.5006666
1102	1	1225641	1225641	C	A	intronic	SCNN1D	NA	NA	NA	intronic	ENSG00000162572	NA	NA	NA	NA	NA	1p36.33	NA	Name=HDAC2_(SC-6296),CTCF,CTCF_(SC-5916),SMC3_(ab9263),GABP,Znf143_(16618-1-AP),Rad21	Name=88	NA	rs2748384	0.48	0.48	0.452	0.490815	0.1123	0.8274	0.3213	0.7564	0.2945	0.11	0.82	0.29	0.77	0.2766	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.01441	NA	NA	0.110774	0.65071	NA	0.312	NA	5.500326
1102	7	100608375	100608375	G	A	intergenic	ACHE,MUC12	dist=114834;dist=4529	NA	NA	ncRNA_exonic	ENSG00000225946	NA	NA	NA	Score=272;Name=lod=17	NA	7q22.1	NA	NA	Name=2	NA	rs75592954	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4997	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.62515	1.62515	NA	NA	NA	NA	0.406	NA	5.5003
1102	1	46806480	46806480	C	T	UTR5	NSUN4	NM_199044:c.-19C>T	NA	NA	UTR5	ENSG00000117481	ENST00000474844:c.-19C>T,ENST00000307089:c.-19C>T,ENST00000536062:c.-4047C>T	NA	NA	NA	NA	1p33	NA	Name=USF-1,CTCF,GTF2F1_(RAP-74),RXRA,IRF1,CHD2_(N-1250),TBP,AP-2gamma,Rad21,ELF1_(SC-631),NFKB,HEY1,Max,ZBTB7A_(SC-34508),c-Myc,CCNT2,STAT1,SRF,SIX5,Oct-2,CTCF_(C-20),PAX5-N19,PAX5-C20,TCF4,YY1,Ini1,Pol2(phosphoS2),SMC3_(ab9263),CTCF_(SC-5916),Pol2,NRSF,SP1,Mxi1_(bHLH),PU.1,HDAC2_(SC-6296),KAP1,MEF2A,Pol2-4H8,eGFP-JunD,E2F6,Sin3Ak-20,YY1_(C-20),BCLAF1_(M33-P5B11),TAF7_(SQ-8),CTCFL_(SC-98982),Pol2(b),TAF1,GATA-1,E2F6_(H-50),ETS1,HMGN3,TAL1_(SC-12984),GABP,ELK4,POU2F2	Name=148	NA	rs17361749	0.16	0.16	0.138	0.127396	0.2773	0.0188	0.147	0.115	0.0879	0.27	0.02	0.17	0.12	0.2675	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.17813	2.17813	NA	0.288372	0.137665	NA	0.181	NA	5.5001614
1102	1	144881389	144881389	T	C	intronic	NBPF9,PDE4DIP	NA	NA	NA	intronic	ENSG00000178104	NA	NA	NA	NA	NA	1q21.1	NA	Name=TAL1_(SC-12984)	Name=8	NA	rs1614163	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.193857	NA	NA	NA	NA	NA	0.5	NA	5.5
1102	1	145533314	145533314	T	C	intronic	ITGA10,NBPF10	NA	NA	NA	intronic	ENSG00000143127	NA	NA	NA	NA	NA	1q21.1	NA	Name=EBF1_(C-8)	Name=2	NA	rs2274619	0.4	0.4	0.365	0.378195	0.5	0.2312	0.4957	0.3684	0.3344	0.49	0.2	0.52	0.4	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.171502	NA	NA	NA	NA	NA	0.326	NA	5.5
1102	2	133019556	133019556	T	C	intergenic	ANKRD30BL,GPR39	dist=4014;dist=154591	NA	NA	upstream	ENSG00000233786	NA	NA	NA	Score=654;Name=lod=604	NA	2q21.2	NA	NA	Name=134	NA	rs377788	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.466566	NA	NA	NA	NA	NA	0.442	NA	5.5
1102	2	133076311	133076311	T	C	intergenic	ANKRD30BL,GPR39	dist=60769;dist=97836	NA	NA	downstream	ENSG00000018607	NA	NA	NA	NA	NA	2q21.2	NA	Name=SETDB1	Name=9	NA	rs7340138	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.328248	NA	NA	NA	NA	NA	0.493	NA	5.5
1102	2	133076366	133076366	T	C	intergenic	ANKRD30BL,GPR39	dist=60824;dist=97781	NA	NA	downstream	ENSG00000018607	NA	NA	NA	NA	NA	2q21.2	NA	Name=SETDB1	Name=9	NA	rs13016179	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.646992	NA	NA	NA	NA	NA	0.486	NA	5.5
1102	2	133076425	133076425	G	A	intergenic	ANKRD30BL,GPR39	dist=60883;dist=97722	NA	NA	downstream	ENSG00000018607	NA	NA	NA	NA	NA	2q21.2	NA	Name=SETDB1	Name=9	NA	rs13033462	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.836255	NA	NA	NA	NA	NA	0.493	NA	5.5
1102	5	97675542	97675542	T	C	intergenic	RIOK2,RGMB	dist=1156537;dist=429457	NA	NA	downstream	ENSG00000176183	NA	NA	NA	Score=852;Name=lod=3875	NA	5q15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.085939	NA	NA	NA	NA	NA	NA	NA	5.5
1102	7	142246961	142246961	G	C	intergenic	LOC730441,MTRNR2L6	dist=274893;dist=127170	NA	NA	downstream	ENSG00000211714	NA	NA	NA	NA	NA	7q34	NA	NA	Name=87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.381404	NA	NA	NA	NA	NA	NA	NA	5.5
1102	10	108309851	108309851	C	T	intergenic	SORCS3,SORCS1	dist=1284858;dist=23570	NA	NA	upstream	ENSG00000215002	NA	NA	NA	Score=715;Name=lod=1078	NA	10q25.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.225503	NA	NA	NA	NA	NA	NA	NA	5.5
1102	14	22580987	22580987	C	G	intergenic	OR4E2,DAD1	dist=446749;dist=452820	NA	NA	downstream	ENSG00000211806	NA	NA	NA	Score=313;Name=lod=25	NA	14q11.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.229741	3.229741	NA	NA	NA	NA	NA	NA	5.5
1102	14	106725138	106725138	C	A	intergenic	ADAM6,LINC00226	dist=286780;dist=19131	NA	NA	downstream	ENSG00000211949	NA	NA	NA	NA	NA	14q32.33	NA	Name=Pol2,SMC3_(ab9263),CTCF,CTCF_(C-20),TCF12	Name=15	NA	rs61750790	0.21	0.21	0.179	NA	NA	NA	NA	NA	NA	0.27	0.31	0.17	0.05	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.986607	NA	NA	NA	NA	NA	0.145	NA	5.5
1102	14	106805044	106805044	T	A	intergenic	LINC00226,LINC00221	dist=60078;dist=133411	NA	NA	downstream	ENSG00000231475	NA	NA	NA	NA	NA	14q32.33	NA	Name=TCF12,PAX5-C20,c-Myc,ZNF263,KAP1,Egr-1,CTCF,CTCFL_(SC-98982)	Name=28	NA	rs61995640	NA	NA	0.262	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.3944	NA	NA	NA	NA	NA	0.188	NA	5.5
1102	14	106812082	106812082	T	C	intergenic	LINC00226,LINC00221	dist=67116;dist=126373	NA	NA	downstream	ENSG00000254289	NA	NA	NA	Score=433;Name=lod=77	NA	14q32.33	NA	Name=Pol2	NA	NA	rs8008887	NA	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.241157	NA	NA	NA	NA	NA	0.406	NA	5.5
1102	14	106881237	106881237	C	T	intergenic	LINC00226,LINC00221	dist=136271;dist=57218	NA	NA	downstream	ENSG00000253467	NA	NA	NA	NA	NA	14q32.33	NA	Name=EBF,EBF1_(C-8)	Name=2	NA	rs75496848	0.27	0.27	0.263	NA	NA	NA	NA	NA	NA	0.27	0.17	0.22	0.42	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.642247	NA	NA	NA	NA	NA	0.21	NA	5.5
1102	14	107130943	107130943	G	A	intergenic	LINC00221,NONE	dist=179414;dist=NONE	NA	NA	downstream	ENSG00000211972	NA	NA	NA	NA	NA	14q32.33	NA	Name=Znf143_(16618-1-AP),YY1_(C-20),Rad21,CTCF,YY1,CTCF_(C-20),TCF12	Name=9	NA	rs1964193	0.25	0.25	0.16	NA	NA	NA	NA	NA	NA	0.23	0.29	0.28	0.21	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.174338	NA	NA	NA	NA	NA	0.268	NA	5.5
1102	14	107169846	107169846	C	A	intergenic	LINC00221,NONE	dist=218317;dist=NONE	NA	NA	downstream	ENSG00000211973	NA	NA	NA	NA	NA	14q32.33	NA	Name=EBF,EBF1_(C-8)	Name=5	NA	rs17114025	0.34	0.34	0.292	NA	NA	NA	NA	NA	NA	0.4	0.3	0.39	0.28	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.726476	NA	NA	NA	NA	NA	0.435	NA	5.5
1102	14	107183320	107183320	T	G	intergenic	LINC00221,NONE	dist=231791;dist=NONE	NA	NA	downstream	ENSG00000254056	NA	NA	NA	NA	NA	14q32.33	NA	Name=CTCF_(SC-5916),TCF12,USF-1,NFKB,ZEB1_(SC-25388),CTCF_(C-20),Znf143_(16618-1-AP),CTCFL_(SC-98982),CTCF,ELF1_(SC-631)	Name=24	NA	rs57397803	NA	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.065	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.594843	NA	NA	NA	NA	NA	0.051	NA	5.5
1102	19	21752057	21752057	T	C	intergenic	ZNF429,ZNF100	dist=30978;dist=154786	NA	NA	upstream	ENSG00000268081	NA	NA	NA	NA	NA	19p12	NA	Name=NF-YB,Pol2,NF-YA	Name=98	NA	rs73025880	NA	NA	0.251	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.065	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.372706	NA	NA	NA	NA	NA	0.058	NA	5.5
1102	19	21752077	21752077	G	C	intergenic	ZNF429,ZNF100	dist=30998;dist=154766	NA	NA	upstream	ENSG00000268081	NA	NA	NA	NA	NA	19p12	NA	Name=NF-YB,NF-YA,Pol2	Name=98	NA	rs73025883	NA	NA	0.239	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.087	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.646238	NA	NA	NA	NA	NA	0.072	NA	5.5
1102	21	11039344	11039344	G	A	UTR3	BAGE2,BAGE3,BAGE4,BAGE5	NM_182482:c.*322C>T;NM_182481:c.*322C>T;NM_181704:c.*537C>T;NM_182484:c.*537C>T	NA	NA	ncRNA_exonic	ENSG00000187172	NA	NA	NA	NA	NA	21p11.1	NA	NA	Name=6	NA	rs3915340	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.16042	NA	NA	NA	NA	NA	0.072	NA	5.5
1102	21	11039394	11039394	C	T	UTR3	BAGE2,BAGE3,BAGE4,BAGE5	NM_182482:c.*272G>A;NM_182481:c.*272G>A;NM_181704:c.*487G>A;NM_182484:c.*487G>A	NA	NA	ncRNA_exonic	ENSG00000187172	NA	NA	NA	NA	NA	21p11.1	NA	NA	Name=6	NA	rs2698623	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.758558	NA	NA	NA	NA	NA	0.21	NA	5.5
1102	21	11098827	11098827	C	T	UTR5	BAGE,BAGE2,BAGE3,BAGE4,BAGE5	NM_001187:c.-90G>A;NM_182482:c.-110G>A;NM_182481:c.-110G>A;NM_181704:c.-90G>A;NM_182484:c.-90G>A	NA	NA	ncRNA_exonic	ENSG00000187172	NA	NA	NA	NA	NA	21p11.1	NA	Name=TAF1,E2F6_(H-50),ETS1,TAF7_(SQ-8),Pol2,NF-YB,GTF2F1_(RAP-74),Pol2(b),Sin3Ak-20,Pol2-4H8,YY1,SETDB1,c-Myc,HEY1,TBP	NA	NA	rs79274499	NA	NA	0.309	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.207049	NA	NA	NA	NA	NA	NA	NA	5.5
1102	21	11098863	11098863	A	G	UTR5	BAGE,BAGE2,BAGE3,BAGE4,BAGE5	NM_001187:c.-126T>C;NM_182482:c.-146T>C;NM_182481:c.-146T>C;NM_181704:c.-126T>C;NM_182484:c.-126T>C	NA	NA	ncRNA_exonic	ENSG00000187172	NA	NA	NA	NA	NA	21p11.1	NA	Name=TAF1,E2F6_(H-50),E2F6,TAF7_(SQ-8),Pol2,NF-YB,GTF2F1_(RAP-74),Pol2(b),Pol2-4H8,Sin3Ak-20,YY1,SETDB1,HEY1,c-Myc	NA	NA	rs75318310	NA	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.369715	NA	NA	NA	NA	NA	NA	NA	5.5
1102	21	11098932	11098932	C	T	UTR5	BAGE	NM_001187:c.-195G>A	NA	NA	ncRNA_exonic	ENSG00000187172	NA	NA	NA	NA	NA	21p11.1	NA	Name=Pol2,E2F6,E2F6_(H-50),TAF1,NF-YA,CHD2_(N-1250),GTF2F1_(RAP-74),NF-YB,YY1,Sin3Ak-20,Pol2-4H8,Pol2(b),c-Myc,HEY1,SETDB1	NA	NA	rs71193807	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.081336	NA	NA	NA	NA	NA	NA	NA	5.5
1102	10	43134086	43134086	C	A	upstream	ZNF33B	NA	NA	NA	upstream	ENSG00000196693,ENSG00000272373	NA	NA	NA	NA	NA	10q11.21	NA	Name=Pol2-4H8,E2F1,KAP1,HA-E2F1,EBF,TBP,Nrf1,SIX5,ZEB1_(SC-25388),HEY1,NFKB,c-Myc,E2F6,NRSF,Pol2,E2F4,Znf143_(16618-1-AP),TAF1,CHD2_(N-1250),EBF1_(C-8),ELF1_(SC-631)	Name=129	NA	rs3740329	0.23	0.23	0.228	0.276757	0.167	0.128	0.2248	0.4728	0.3149	0.16	0.13	0.22	0.48	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.120056	NA	NA	NA	NA	NA	0.203	NA	5.4996666
1102	10	97604503	97604503	T	C	ncRNA_intronic	ENTPD1-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000226688,ENSG00000240527	NA	NA	NA	NA	NA	10q24.1	Score=788;Name=V$POU3F2_01	NA	NA	NA	rs3176885	0.25	0.25	0.263	0.28135	0.167	0.2202	0.196	0.3949	0.3691	0.17	0.22	0.2	0.45	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.827523	NA	NA	NA	NA	NA	0.29	NA	5.4996666
1102	10	97607075	97607075	C	T	ncRNA_intronic	ENTPD1-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000226688,ENSG00000240527	NA	NA	NA	NA	NA	10q24.1	NA	Name=MafK_(SC-477),MafK_(ab50322)	NA	NA	rs3181123	0.25	0.25	0.263	0.28115	0.167	0.2192	0.196	0.3949	0.3691	0.17	0.22	0.2	0.45	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.413042	NA	NA	NA	NA	NA	0.29	NA	5.4996666
1102	10	8006798	8006798	A	G	exonic	TAF3	NA	nonsynonymous SNV	TAF3:NM_031923:exon3:c.A1325G:p.N442S	exonic	ENSG00000165632	NA	nonsynonymous SNV	ENSG00000165632:ENST00000344293:exon3:c.A1325G:p.N442S	NA	NA	10p14	NA	NA	NA	NA	rs4747647	0.57	0.57	0.531	0.542133	0.6203	0.7103	0.7349	0.2632	0.5286	0.62	0.72	0.71	0.23	0.6047	0.72	0.76	T	0.003	B	0.003	B	0.022	N	1.000	P	1.225	L	2.27	T	-0.981	T	0.000	T	0.004	-0.334	2.419	1.74	0.358	-0.160	6.774	-0.333541	NA	0.34	0.608717	0.357999	ID=COSM427970;OCCURENCE=1(breast)	0.507	NA	5.4996164
1102	18	40323497	40323497	G	T	exonic	RIT2	NA	synonymous SNV	RIT2:NM_002930:exon5:c.C615A:p.L205L	exonic	ENSG00000152214	NA	synonymous SNV	ENSG00000152214:ENST00000326695:exon5:c.C615A:p.L205L	Score=524;Name=lod=180	NA	18q12.3	NA	NA	NA	NA	rs1804730	0.58	0.58	0.58	0.589856	0.3519	0.6984	0.6023	0.8215	0.4008	0.33	0.72	0.57	0.81	0.4541	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.167852	NA	NA	0.361163	0.746936	NA	0.63	NA	5.4995036
1102	19	30193721	30193721	G	A	exonic	C19orf12	NA	synonymous SNV	C19orf12:NM_001031726:exon3:c.C357T:p.T119T,C19orf12:NM_001256047:exon3:c.C324T:p.T108T,C19orf12:NM_031448:exon3:c.C324T:p.T108T	exonic	ENSG00000131943	NA	synonymous SNV	ENSG00000131943:ENST00000392276:exon2:c.C132T:p.T44T,ENSG00000131943:ENST00000323670:exon3:c.C324T:p.T108T,ENSG00000131943:ENST00000392278:exon3:c.C357T:p.T119T	NA	NA	19q12	NA	NA	Name=7	NA	rs10424582	0.61	0.61	0.602	0.613818	0.7565	0.3006	0.5216	0.7905	0.6166	0.75	0.26	0.59	0.8	0.667	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.21695	NA	NA	0.74407	0.76759	NA	0.63	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116507.1;CLNDSDB=.;CLNDSDBID=.	5.4990966
1102	17	78082504	78082504	G	A	exonic	GAA	NA	synonymous SNV	GAA:NM_000152:exon8:c.G1203A:p.Q401Q,GAA:NM_001079804:exon8:c.G1203A:p.Q401Q,GAA:NM_001079803:exon9:c.G1203A:p.Q401Q	exonic	ENSG00000171298	NA	synonymous SNV	ENSG00000171298:ENST00000302262:exon8:c.G1203A:p.Q401Q,ENSG00000171298:ENST00000390015:exon9:c.G1203A:p.Q401Q	Score=514;Name=lod=163	NA	17q25.3	NA	NA	NA	NA	rs1800304	0.61	0.61	0.613	0.602835	0.7515	0.5427	0.5418	0.5166	0.6718	0.75	0.57	0.55	0.49	0.6784	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.975606	NA	NA	0.738023	0.539318	NA	0.638	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000078155.2;CLNDSDB=.;CLNDSDBID=.	5.4987436
1102	2	29356669	29356669	A	G	exonic	CLIP4	NA	synonymous SNV	CLIP4:NM_024692:exon5:c.A516G:p.T172T	exonic	ENSG00000115295	NA	synonymous SNV	ENSG00000115295:ENST00000401617:exon4:c.A195G:p.T65T,ENSG00000115295:ENST00000438819:exon4:c.A195G:p.T65T,ENSG00000115295:ENST00000320081:exon5:c.A516G:p.T172T,ENSG00000115295:ENST00000401605:exon5:c.A516G:p.T172T,ENSG00000115295:ENST00000404424:exon5:c.A516G:p.T172T,ENSG00000115295:ENST00000415891:exon5:c.A516G:p.T172T,ENSG00000115295:ENST00000449202:exon5:c.A516G:p.T172T	Score=415;Name=lod=65	NA	2p23.2	NA	NA	NA	NA	rs3100232	0.42	0.42	0.462	0.415136	0.4006	0.3204	0.317	0.6747	0.2464	0.38	0.35	0.32	0.65	0.3704	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.505701	NA	NA	0.396977	0.607127	NA	0.435	NA	5.4986896
1102	21	36421036	36421036	T	C	intronic	RUNX1	NA	NA	NA	intronic	ENSG00000159216	NA	NA	NA	NA	NA	21q22.12	NA	Name=Pol2,YY1_(C-20),TAF1,YY1,Pol2-4H8,NFKB,PAX5-N19,SRF	Name=132	NA	rs8133634	0.58	0.58	0.585	0.573083	0.502	0.5427	0.4524	0.8729	0.3579	0.52	0.51	0.48	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.301672	1.301672	NA	NA	NA	NA	0.478	NA	5.498
1102	7	132192295	132192295	G	A	exonic	PLXNA4	NA	synonymous SNV	PLXNA4:NM_001105543:exon2:c.C1158T:p.L386L,PLXNA4:NM_020911:exon2:c.C1158T:p.L386L,PLXNA4:NM_181775:exon3:c.C1158T:p.L386L	exonic	ENSG00000221866	NA	synonymous SNV	ENSG00000221866:ENST00000321063:exon2:c.C1158T:p.L386L,ENSG00000221866:ENST00000359827:exon2:c.C1158T:p.L386L,ENSG00000221866:ENST00000423507:exon2:c.C1158T:p.L386L,ENSG00000221866:ENST00000378539:exon3:c.C1158T:p.L386L	Score=586;Name=lod=320	NA	7q32.3	NA	NA	NA	NA	rs156961	0.37	0.37	0.379	0.393171	0.3917	0.2708	0.3588	0.5159	0.3793	0.4	0.26	0.34	0.48	0.388	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.571591	NA	NA	0.389186	0.479119	NA	0.536	NA	5.4977806
1102	11	33076191	33076191	T	C	exonic	TCP11L1	NA	synonymous SNV	TCP11L1:NM_001145541:exon3:c.T216C:p.G72G,TCP11L1:NM_018393:exon3:c.T216C:p.G72G	exonic	ENSG00000176148	NA	synonymous SNV	ENSG00000176148:ENST00000334274:exon3:c.T216C:p.G72G,ENSG00000176148:ENST00000432887:exon3:c.T216C:p.G72G,ENSG00000176148:ENST00000527661:exon3:c.T216C:p.G72G,ENSG00000176148:ENST00000528107:exon3:c.T216C:p.G72G,ENSG00000176148:ENST00000531632:exon3:c.T216C:p.G72G,ENSG00000176148:ENST00000602733:exon3:c.T216C:p.G72G,ENSG00000176148:ENST00000530419:exon4:c.T216C:p.G72G	Score=472;Name=lod=111	NA	11p13	Score=934;Name=V$AP1FJ_Q2	NA	NA	NA	rs2273544	0.73	0.73	0.725	0.717053	0.7356	0.881	0.67	0.6536	0.6483	0.73	0.88	0.67	0.62	0.7043	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.510489	NA	NA	0.729409	0.672343	NA	0.688	NA	5.4973576
1102	19	11034039	11034039	T	A	exonic	YIPF2	NA	synonymous SNV	YIPF2:NM_024029:exon9:c.A879T:p.P293P	exonic	ENSG00000130733	NA	synonymous SNV	ENSG00000130733:ENST00000591872:exon2:c.A168T:p.P56P,ENSG00000130733:ENST00000586575:exon8:c.A300T:p.P100P,ENSG00000130733:ENST00000590329:exon8:c.A762T:p.P254P,ENSG00000130733:ENST00000253031:exon9:c.A879T:p.P293P,ENSG00000130733:ENST00000586748:exon9:c.A879T:p.P293P	NA	NA	19p13.2	NA	NA	NA	NA	rs17850995	0.03	0.03	0.022	0.0231629	0.0577	NA	0.0677	0.0045	0.0051	0.05	NA	0.08	0.01	0.0448	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.234318	NA	NA	0.066977	0.017476	NA	NA	NA	5.4971896
1102	5	133897829	133897829	C	T	intronic	PHF15	NA	NA	NA	intronic	ENSG00000043143	NA	NA	NA	NA	NA	5q31.1	NA	Name=MafK_(ab50322),MafK_(SC-477),GATA-2,c-Fos,c-Jun	Name=117	NA	rs329304	0.37	0.37	0.355	0.353834	0.503	0.3313	0.4352	0.2012	0.3722	0.5	0.29	0.45	0.2	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.039157	NA	NA	NA	NA	NA	0.355	NA	5.497
1102	7	6970401	6970401	T	G	intergenic	CCZ1B,LOC100131257	dist=104475;dist=145000	NA	NA	ncRNA_exonic	ENSG00000226943	NA	NA	NA	Score=505;Name=lod=150	NA	7p22.1	NA	Name=Rad21,CTCF	NA	NA	rs7800800	0.65	0.65	0.647	0.682708	0.503	0.7341	0.6455	0.8517	0.6125	0.5	0.73	0.6	0.81	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.134373	NA	NA	NA	NA	NA	0.507	NA	5.497
1102	19	35741456	35741456	T	C	exonic	LSR	NA	synonymous SNV	LSR:NM_001260489:exon2:c.T492C:p.V164V,LSR:NM_001260490:exon2:c.T492C:p.V164V,LSR:NM_015925:exon2:c.T492C:p.V164V,LSR:NM_205834:exon2:c.T492C:p.V164V,LSR:NM_205835:exon2:c.T492C:p.V164V	exonic	ENSG00000105699	NA	synonymous SNV	ENSG00000105699:ENST00000347609:exon2:c.T381C:p.V127V,ENSG00000105699:ENST00000354900:exon2:c.T492C:p.V164V,ENSG00000105699:ENST00000360798:exon2:c.T492C:p.V164V,ENSG00000105699:ENST00000361790:exon2:c.T492C:p.V164V,ENSG00000105699:ENST00000427250:exon2:c.T348C:p.V116V,ENSG00000105699:ENST00000601623:exon2:c.T270C:p.V90V,ENSG00000105699:ENST00000602122:exon2:c.T492C:p.V164V,ENSG00000105699:ENST00000605618:exon2:c.T369C:p.V123V	Score=456;Name=lod=95	NA	19q13.12	Score=803;Name=V$AHR_01	NA	NA	NA	rs2073900	0.59	0.59	0.551	0.563898	0.7445	0.4683	0.6844	0.3888	0.6278	0.74	0.49	0.69	0.39	0.6816	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.121604	NA	NA	0.743605	0.453926	NA	0.529	NA	5.4969616
1102	7	107838464	107838464	G	T	exonic	NRCAM	NA	synonymous SNV	NRCAM:NM_001037132:exon11:c.C1287A:p.V429V,NRCAM:NM_001193583:exon13:c.C1230A:p.V410V,NRCAM:NM_001193584:exon13:c.C1230A:p.V410V,NRCAM:NM_005010:exon13:c.C1269A:p.V423V,NRCAM:NM_001193582:exon14:c.C1287A:p.V429V	exonic	ENSG00000091129	NA	synonymous SNV	ENSG00000091129:ENST00000417701:exon11:c.C1269A:p.V423V,ENSG00000091129:ENST00000425651:exon11:c.C1287A:p.V429V,ENSG00000091129:ENST00000351718:exon13:c.C1269A:p.V423V,ENSG00000091129:ENST00000379024:exon13:c.C1230A:p.V410V,ENSG00000091129:ENST00000379028:exon14:c.C1287A:p.V429V,ENSG00000091129:ENST00000413765:exon14:c.C1230A:p.V410V,ENSG00000091129:ENST00000379022:exon15:c.C1287A:p.V429V	NA	NA	7q31.1	NA	Name=MafF_(M8194)	Name=2	NA	rs381318	0.7	0.7	0.672	0.661342	0.7416	0.88	0.7666	0.388	0.6483	0.74	0.88	0.76	0.36	0.7068	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.946329	NA	NA	0.721395	0.443486	NA	0.565	NA	5.4968716
1102	17	8076778	8076778	C	T	UTR3	TMEM107	NM_183065:c.*743G>A,NM_032354:c.*743G>A	NA	NA	ncRNA_exonic	ENSG00000200463	NA	NA	NA	Score=487;Name=lod=127	NA	17p13.1	NA	Name=FOSL1_(SC-183),Max,GR,ELF1_(SC-631),FOXA1_(SC-101058),HNF4G_(SC-6558),Oct-2,CTCF,BHLHE40,p300,CHD2_(N-1250),BATF,RXRA,CEBPB,GTF2F1_(RAP-74),ETS1,TAF1,GATA-1,MafK_(SC-477),CTCFL_(SC-98982),POU2F2,ZBTB33,HMGN3,Mxi1_(bHLH),PU.1,SP1,NRSF,Pol2,SMC3_(ab9263),MEF2C_(SC-13268),Pol2(phosphoS2),TAF7_(SQ-8),BCL11A,BCLAF1_(M33-P5B11),YY1_(C-20),BRCA1_(C-1863),IRF4_(M-17),eGFP-JunD,TR4,USF1_(SC-8983),GATA3_(SC-268),MEF2A,CCNT2,c-Myc,ZEB1_(SC-25388),eGFP-GATA2,HEY1,BCL3,NFKB,PAX5-C20,PAX5-N19,POU5F1_(SC-9081),SIX5,MafK_(ab50322),SETDB1,SRF,p300_(N-15),GTF2B,USF-1,TCF12,THAP1_(SC-98174),TBP,GATA2_(CG2-96),Pol2(b),JunD,FOSL2,eGFP-JunB,AP-2alpha,SIRT6,FOXA1_(C-20),RFX5_(N-494),GCN5,Egr-1,NANOG_(SC-33759),STAT3,YY1,Pbx3,c-Jun,Sin3Ak-20,GATA-2,E2F1,Pol2-4H8,HDAC2_(SC-6296),KAP1,ZNF263	Name=147	NA	rs9894790	0.62	0.62	0.573	0.630192	0.6799	0.495	0.6988	0.5877	0.727	0.68	0.54	0.68	0.57	0.6692	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.488129	NA	NA	0.654194	0.634132	NA	0.63	NA	5.496706
1102	3	125641394	125641394	T	G	ncRNA_intronic	FAM86JP	NA	NA	NA	ncRNA_exonic	ENSG00000171084	NA	NA	NA	Score=425;Name=lod=71	NA	3q21.2	NA	NA	NA	NA	rs13315434	0.25	0.25	0.27	0.269569	0.17	0.1071	0.1801	0.6059	0.1483	0.17	0.1	0.2	0.59	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.54849	NA	NA	NA	NA	NA	0.304	NA	5.4966666
1102	3	125642587	125642587	A	G	ncRNA_intronic	FAM86JP	NA	NA	NA	ncRNA_exonic	ENSG00000171084	NA	NA	NA	Score=523;Name=lod=178	NA	3q21.2	NA	NA	NA	NA	rs13094642	0.21	0.21	0.171	0.269369	0.17	0.1071	0.1787	0.6059	0.1483	0.14	0.09	0.17	0.49	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.119397	NA	NA	NA	NA	NA	0.116	NA	5.4966666
1102	3	125642621	125642621	C	T	ncRNA_intronic	FAM86JP	NA	NA	NA	ncRNA_exonic	ENSG00000171084	NA	NA	NA	Score=523;Name=lod=178	NA	3q21.2	NA	NA	NA	NA	rs13094793	0.24	0.24	0.218	0.269369	0.17	0.1071	0.1787	0.6059	0.1483	0.16	0.1	0.2	0.57	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.23132	NA	NA	NA	NA	NA	0.181	NA	5.4966666
1102	3	125643860	125643860	G	A	ncRNA_exonic	FAM86JP	NA	NA	NA	ncRNA_exonic	ENSG00000171084	NA	NA	NA	NA	NA	3q21.2	NA	Name=ERalpha_a	NA	NA	rs13063122	0.25	0.25	0.27	0.271166	0.17	0.1062	0.1758	0.6157	0.1472	0.17	0.1	0.19	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.054488	NA	NA	NA	NA	NA	0.116	NA	5.4966666
1102	18	29237860	29237860	C	T	intronic	B4GALT6	NA	NA	NA	intronic	ENSG00000118276	NA	NA	NA	NA	NA	18q12.1	NA	Name=KAP1	Name=12	NA	rs1449087	0.49	0.49	0.471	0.47504	0.504	0.6964	0.4942	0.1014	0.7086	0.51	0.76	0.5	0.13	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.616574	NA	NA	NA	NA	NA	0.42	NA	5.496
1102	1	55089071	55089071	C	T	UTR5	FAM151A	NM_176782:c.-3G>A	NA	NA	ncRNA_UTR5	ENSG00000162391	NA	NA	NA	NA	NA	1p32.3	NA	NA	Name=6	NA	rs17110842	0.01	0.01	0.013	0.013778	NA	NA	0.0029	0.0507	NA	NA	NA	0.0028	0.05	0.0038	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.036758	NA	NA	0.000233	0.036314	NA	0.014	NA	5.495967
1102	22	42971987	42971987	T	C	ncRNA_exonic	RRP7B	NA	NA	NA	ncRNA_exonic	ENSG00000182841	NA	NA	NA	Score=534;Name=lod=197	NA	22q13.2	NA	NA	NA	NA	rs137064	0.43	0.43	0.381	0.440695	0.171	0.6845	0.2277	0.6831	0.2904	0.19	0.64	0.25	0.7	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.924064	NA	NA	NA	NA	ID=COSM1130417;OCCURENCE=1(prostate)	0.341	NA	5.4956666
1102	6	161139480	161139480	C	T	exonic	PLG	NA	synonymous SNV	PLG:NM_000301:exon8:c.C942T:p.F314F	exonic	ENSG00000122194	NA	synonymous SNV	ENSG00000122194:ENST00000308192:exon8:c.C942T:p.F314F	Score=511;Name=lod=159	NA	6q26	NA	NA	NA	NA	rs1130656	0.37	0.37	0.345	0.34984	0.3897	0.4554	0.2824	0.2368	0.4008	0.4	0.49	0.3	0.24	0.3785	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.077102	NA	NA	0.403023	0.266909	ID=COSM1131985;OCCURENCE=1(prostate)	0.268	NA	5.4954436
1102	6	150004779	150004779	A	G	exonic	LATS1	NA	synonymous SNV	LATS1:NM_001270519:exon4:c.T1446C:p.S482S,LATS1:NM_004690:exon4:c.T1446C:p.S482S	exonic	ENSG00000131023	NA	synonymous SNV	ENSG00000131023:ENST00000253339:exon3:c.T1446C:p.S482S,ENSG00000131023:ENST00000392273:exon4:c.T1446C:p.S482S,ENSG00000131023:ENST00000543571:exon4:c.T1446C:p.S482S	NA	NA	6q25.1	NA	NA	Name=20	NA	rs3798761	0.56	0.56	0.539	0.552316	0.3579	0.8244	0.6369	0.5779	0.3773	0.35	0.8	0.6	0.6	0.4493	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.34986	NA	NA	0.364419	0.54108	NA	0.609	NA	5.4950476
1103	18	72998004	72998004	T	C	exonic	TSHZ1	NA	synonymous SNV	TSHZ1:NM_005786:exon2:c.T507C:p.Y169Y	exonic	ENSG00000179981	NA	synonymous SNV	ENSG00000179981:ENST00000322038:exon2:c.T507C:p.Y169Y,ENSG00000179981:ENST00000560918:exon2:c.T507C:p.Y169Y,ENSG00000179981:ENST00000580243:exon2:c.T642C:p.Y214Y	Score=387;Name=lod=50	NA	18q22.3	NA	NA	NA	NA	rs3744908	0.28	0.28	0.255	0.275759	0.4085	0.1687	0.3545	0.1293	0.3916	0.41	0.16	0.41	0.12	0.3622	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.519401	NA	NA	0.401047	0.168407	NA	0.225	NA	5.4949196
1103	9	115931593	115931593	G	A	exonic	FKBP15	NA	synonymous SNV	FKBP15:NM_015258:exon26:c.C3396T:p.T1132T	exonic	ENSG00000119321	NA	synonymous SNV	ENSG00000119321:ENST00000238256:exon26:c.C3396T:p.T1132T,ENSG00000119321:ENST00000446284:exon26:c.C3471T:p.T1157T	NA	NA	9q32	NA	NA	NA	NA	rs1128122	0.04	0.04	0.039	0.0611022	0.0467	0.0387	0.0317	0.0363	0.1534	0.04	0.02	0.03	0.04	0.0619	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.407621	NA	NA	0.063375	0.044566	NA	0.087	NA	5.4946916
1103	3	125642614	125642614	G	A	ncRNA_intronic	FAM86JP	NA	NA	NA	ncRNA_exonic	ENSG00000171084	NA	NA	NA	Score=523;Name=lod=178	NA	3q21.2	NA	NA	NA	NA	rs13095106	0.24	0.24	0.21	0.272165	0.172	0.1081	0.1787	0.6059	0.1595	0.16	0.1	0.19	0.55	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.127032	NA	NA	NA	NA	NA	0.181	NA	5.4946666
1103	15	42192885	42192885	G	A	exonic	EHD4	NA	synonymous SNV	EHD4:NM_139265:exon6:c.C1584T:p.L528L	exonic	ENSG00000103966	NA	synonymous SNV	ENSG00000103966:ENST00000220325:exon6:c.C1584T:p.L528L	NA	NA	15q15.1	NA	NA	NA	NA	rs113393602	0.04	0.04	0.023	0.0409345	0.0517	0.0129	0.0634	0.0234	0.0665	0.06	0.02	0.06	0.02	0.0631	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.437464	NA	NA	0.057482	0.030214	NA	0.029	NA	5.4943846
1103	6	149983216	149983216	G	A	exonic	LATS1	NA	synonymous SNV	LATS1:NM_004690:exon8:c.C3042T:p.D1014D	exonic	ENSG00000131023	NA	synonymous SNV	ENSG00000131023:ENST00000253339:exon7:c.C3042T:p.D1014D,ENSG00000131023:ENST00000543571:exon8:c.C3042T:p.D1014D	Score=749;Name=lod=1475	NA	6q25.1	NA	NA	NA	NA	rs3924871	0.56	0.56	0.55	0.550719	0.3588	0.8214	0.6326	0.5749	0.3783	0.35	0.8	0.6	0.59	0.4492	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.161498	NA	NA	0.364302	0.536541	NA	0.609	NA	5.4943646
1103	4	8230235	8230235	T	C	exonic	SH3TC1	NA	synonymous SNV	SH3TC1:NM_018986:exon12:c.T2814C:p.L938L	exonic	ENSG00000125089	NA	synonymous SNV	ENSG00000125089:ENST00000245105:exon12:c.T2814C:p.L938L,ENSG00000125089:ENST00000539824:exon12:c.T2586C:p.L862L	NA	NA	4p16.1	NA	Name=NFKB,USF-1	Name=3	NA	rs1281151	0.58	0.58	0.561	0.55651	0.7346	0.5169	0.549	0.3737	0.6667	0.73	0.49	0.62	0.41	0.6675	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.344556	NA	NA	0.770377	0.444444	ID=COSM448222;OCCURENCE=1(breast)	0.543	NA	5.4941896
1103	22	37770357	37770357	A	G	exonic	ELFN2	NA	synonymous SNV	ELFN2:NM_052906:exon3:c.T1218C:p.F406F	exonic	ENSG00000166897	NA	synonymous SNV	ENSG00000166897:ENST00000349653:exon1:c.T1218C:p.F406F,ENSG00000166897:ENST00000402918:exon3:c.T1218C:p.F406F	Score=601;Name=lod=368	NA	22q13.1	NA	NA	NA	NA	rs7292751	0.46	0.46	0.429	0.446086	0.3698	0.3492	0.6225	0.6135	0.273	0.38	0.37	0.57	0.61	0.4221	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.355653	NA	NA	0.380581	0.615751	NA	0.471	NA	5.4941856
1103	9	90500224	90500224	C	T	exonic	SPATA31E1	NA	synonymous SNV	SPATA31E1:NM_178828:exon4:c.C822T:p.P274P	exonic	ENSG00000177992	NA	synonymous SNV	ENSG00000177992:ENST00000325643:exon4:c.C822T:p.P274P	NA	NA	9q22.1	NA	NA	NA	NA	rs58932350	0.1	0.1	0.089	0.102636	0.0636	0.0347	0.0418	0.267	0.0337	0.07	0.03	0.05	0.25	0.0614	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.349876	NA	NA	0.047907	0.210168	NA	0.109	NA	5.4937596
1103	12	120741382	120741382	G	A	exonic	SIRT4	NA	synonymous SNV	SIRT4:NM_012240:exon2:c.G18A:p.A6A	exonic	ENSG00000089163	NA	synonymous SNV	ENSG00000089163:ENST00000202967:exon2:c.G18A:p.A6A	NA	NA	12q24.31	NA	NA	NA	NA	rs61748115	0.08	0.08	0.079	0.0836661	0.0537	0.1151	0.1902	0.0272	0.0828	0.06	0.11	0.15	0.03	0.0738	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.972845	1.972845	NA	0.045465	0.035179	NA	0.065	NA	5.4937016
1103	1	235972435	235972435	T	C	exonic	LYST	NA	synonymous SNV	LYST:NM_000081:exon5:c.A1683G:p.L561L	exonic	ENSG00000143669	NA	synonymous SNV	ENSG00000143669:ENST00000389793:exon5:c.A1683G:p.L561L,ENSG00000143669:ENST00000389794:exon5:c.A1683G:p.L561L,ENSG00000143669:ENST00000536965:exon5:c.A1683G:p.L561L	Score=272;Name=lod=17	NA	1q42.3	NA	NA	NA	NA	rs3820553	0.33	0.33	0.334	0.302716	0.4235	0.0665	0.2983	0.4879	0.1748	0.42	0.09	0.31	0.49	0.3499	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.866139	NA	NA	0.399651	0.508852	NA	0.312	NA	5.4936156
1103	18	47376128	47376128	A	G	intronic	MYO5B	NA	NA	NA	ncRNA_exonic	ENSG00000267322	NA	NA	NA	NA	NA	18q21.1	NA	Name=TCF4,Pol2,eGFP-JunD,TAF1,CEBPB,GTF2F1_(RAP-74),Max,ZNF263,c-Fos,E2F1,c-Jun,Pol2(b),JunD,FOSL2,TBP,eGFP-FOS	Name=125	NA	rs490697	0.89	0.89	0.897	0.90016	0.84	0.9613	0.9092	0.879	0.9213	0.84	0.97	0.9	0.9	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.126143	NA	NA	NA	NA	NA	0.812	NA	5.4933333
1103	7	100608710	100608710	A	C	intergenic	ACHE,MUC12	dist=115169;dist=4194	NA	NA	ncRNA_exonic	ENSG00000225946	NA	NA	NA	NA	NA	7q22.1	NA	Name=Rad21,CTCF,GABP	Name=5	NA	rs62483706	NA	NA	NA	0.0357428	0.006	0.0823	0.013	0.0416	0.0266	NA	NA	NA	NA	0.5007	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.875286	NA	NA	NA	NA	NA	0.457	NA	5.4933
1103	6	10398982	10398982	A	T	intronic	TFAP2A	NA	NA	NA	intronic	ENSG00000137203	NA	NA	NA	NA	NA	6p24.3	NA	Name=Pol2,SUZ12	Name=8	NA	rs303048	0.34	0.34	0.354	0.329473	0.1441	0.2728	0.2277	0.7398	0.0961	0.14	0.31	0.28	0.72	0.2108	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.200437	NA	NA	0.15186	0.656151	NA	0.377	NA	5.49324
1103	7	1478495	1478495	A	G	exonic	MICALL2	NA	synonymous SNV	MICALL2:NM_182924:exon10:c.T2103C:p.P701P	exonic	ENSG00000164877	NA	nonsynonymous SNV	ENSG00000164877:ENST00000413446:exon9:c.T1973C:p.L658P	NA	NA	7p22.3	NA	NA	NA	NA	rs4492283	0.24	0.24	0.225	0.253195	0.1362	0.0288	0.3098	0.5605	0.1493	0.14	0.04	0.31	0.59	0.2028	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.506932	NA	0	0.167791	0.491148	NA	0.304	NA	5.493209
1103	6	149953981	149953981	C	T	exonic	KATNA1	NA	synonymous SNV	KATNA1:NM_001204076:exon3:c.G234A:p.L78L,KATNA1:NM_007044:exon3:c.G234A:p.L78L	exonic	ENSG00000186625	NA	synonymous SNV	ENSG00000186625:ENST00000335647:exon2:c.G234A:p.L78L,ENSG00000186625:ENST00000335643:exon3:c.G234A:p.L78L,ENSG00000186625:ENST00000367411:exon3:c.G234A:p.L78L,ENSG00000186625:ENST00000420200:exon3:c.G234A:p.L78L,ENSG00000186625:ENST00000444282:exon3:c.G234A:p.L78L	Score=621;Name=lod=445	NA	6q25.1	NA	NA	NA	NA	rs9800580	0.57	0.57	0.555	0.561502	0.3579	0.8224	0.6398	0.6074	0.3845	0.35	0.8	0.6	0.62	0.4532	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.04483	NA	NA	0.362442	0.573309	NA	0.601	NA	5.4931246
1103	7	91641928	91641928	A	G	exonic	AKAP9	NA	synonymous SNV	AKAP9:NM_005751:exon9:c.A3504G:p.E1168E,AKAP9:NM_147185:exon9:c.A3504G:p.E1168E	exonic	ENSG00000127914	NA	synonymous SNV	ENSG00000127914:ENST00000356239:exon9:c.A3504G:p.E1168E,ENSG00000127914:ENST00000358100:exon10:c.A3540G:p.E1180E,ENSG00000127914:ENST00000359028:exon10:c.A3540G:p.E1180E	Score=555;Name=lod=241	NA	7q21.2	NA	NA	NA	NA	rs13245393	0.36	0.36	0.375	0.373802	0.3867	0.1617	0.3573	0.5076	0.41	0.39	0.17	0.38	0.53	0.3838	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.411998	NA	NA	0.40314	0.517249	NA	0.413	NA	5.4930266
1103	2	207101213	207101213	A	G	intergenic	GPR1,ZDBF2	dist=18442;dist=38310	NA	NA	ncRNA_exonic	ENSG00000159186	NA	NA	NA	Score=265;Name=lod=16	NA	2q33.3	NA	NA	Name=2	NA	rs2359165	NA	NA	NA	0.561102	0.507	0.5079	0.5994	0.6316	0.5491	NA	NA	NA	NA	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.749508	NA	NA	NA	NA	NA	0.5	NA	5.493
1103	6	24505030	24505030	A	G	intronic	ALDH5A1	NA	NA	NA	intronic	ENSG00000112294	NA	NA	NA	NA	NA	6p22.3	NA	Name=CEBPB,FOSL2,GABP,HDAC2_(SC-6296)	Name=12	NA	rs2744583	0.43	0.43	0.423	0.438898	0.507	0.2688	0.3329	0.5461	0.4744	0.51	0.27	0.38	0.52	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.405055	2.405055	NA	NA	NA	ID=COSN167707;OCCURENCE=1(large_intestine),1(endometrium)	0.514	NA	5.493
1103	13	90823825	90823825	G	T	intergenic	LINC00559,MIR622	dist=51854;dist=59611	NA	NA	ncRNA_exonic	ENSG00000235879	NA	NA	NA	Score=789;Name=lod=2137	NA	13q31.3	NA	NA	Name=3	NA	rs9560569	0.53	0.53	0.512	0.542332	0.507	0.62	0.5058	0.4334	0.6718	0.53	0.62	0.55	0.43	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.622895	NA	NA	NA	NA	NA	0.522	NA	5.493
1103	19	24015602	24015602	C	T	intergenic	RPSAP58,ZNF726	dist=4683;dist=82082	NA	NA	ncRNA_exonic	ENSG00000233836	NA	NA	NA	Score=407;Name=lod=60	NA	19p12	NA	Name=SETDB1,ZNF274,KAP1	NA	NA	rs2364757	0.36	0.36	0.344	0.31869	0.507	0.2054	0.3573	0.289	0.2546	0.5	0.23	0.38	0.26	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.5826	NA	NA	NA	NA	NA	0.391	NA	5.493
1103	19	16872940	16872940	G	A	exonic	NWD1	NA	synonymous SNV	NWD1:NM_001007525:exon8:c.G2124A:p.L708L	exonic	ENSG00000188039	NA	synonymous SNV	ENSG00000188039:ENST00000339803:exon4:c.G1719A:p.L573L,ENSG00000188039:ENST00000379808:exon6:c.G2124A:p.L708L,ENSG00000188039:ENST00000552788:exon6:c.G2124A:p.L708L,ENSG00000188039:ENST00000523826:exon7:c.G1506A:p.L502L,ENSG00000188039:ENST00000549814:exon7:c.G2124A:p.L708L,ENSG00000188039:ENST00000524140:exon8:c.G2124A:p.L708L	Score=419;Name=lod=67	NA	19p13.11	NA	NA	NA	NA	rs773852	0.36	0.36	0.39	0.39976	0.3917	0.1895	0.2709	0.6172	0.4223	0.39	0.17	0.31	0.57	0.3832	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4181	NA	NA	0.398837	0.567408	NA	0.348	NA	5.4929296
1103	19	19307797	19307797	C	T	exonic	RFXANK	NA	synonymous SNV	RFXANK:NM_003721:exon4:c.C213T:p.T71T,RFXANK:NM_134440:exon4:c.C210T:p.T70T	exonic	ENSG00000064490	NA	synonymous SNV	ENSG00000064490:ENST00000535017:exon2:c.C108T:p.T36T,ENSG00000064490:ENST00000392324:exon3:c.C210T:p.T70T,ENSG00000064490:ENST00000407360:exon3:c.C213T:p.T71T,ENSG00000064490:ENST00000540981:exon3:c.C213T:p.T71T,ENSG00000064490:ENST00000303088:exon4:c.C213T:p.T71T,ENSG00000064490:ENST00000353145:exon4:c.C210T:p.T70T,ENSG00000064490:ENST00000456252:exon4:c.C213T:p.T71T,ENSG00000064490:ENST00000593273:exon4:c.C210T:p.T70T	NA	NA	19p13.11	NA	NA	NA	NA	rs72997200	0.03	0.03	0.02	0.028754	0.0596	NA	0.036	0.0008	0.0593	0.06	NA	0.04	0.0041	0.0523	0.062	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.239429	NA	NA	0.062442	0.01271	NA	0.109	NA	5.4923246
1103	12	120762837	120762837	A	G	exonic	PLA2G1B	NA	synonymous SNV	PLA2G1B:NM_000928:exon3:c.T222C:p.Y74Y	exonic	ENSG00000170890	NA	synonymous SNV	ENSG00000170890:ENST00000549767:exon2:c.T135C:p.Y45Y,ENSG00000170890:ENST00000308366:exon3:c.T222C:p.Y74Y	NA	NA	12q24.31	NA	NA	NA	NA	rs5634	0.08	0.08	0.081	0.0910543	0.0537	0.1151	0.1945	0.0522	0.0838	0.06	0.11	0.15	0.05	0.0755	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.302494	1.302494	NA	0.045581	0.061507	NA	0.065	NA	5.4918856
1103	1	235972867	235972867	T	C	exonic	LYST	NA	synonymous SNV	LYST:NM_000081:exon5:c.A1251G:p.Q417Q	exonic	ENSG00000143669	NA	synonymous SNV	ENSG00000143669:ENST00000389793:exon5:c.A1251G:p.Q417Q,ENSG00000143669:ENST00000389794:exon5:c.A1251G:p.Q417Q,ENSG00000143669:ENST00000536965:exon5:c.A1251G:p.Q417Q	Score=615;Name=lod=420	NA	1q42.3	NA	NA	NA	NA	rs1063128	0.33	0.33	0.319	0.303315	0.4254	0.0655	0.2997	0.4887	0.1748	0.42	0.09	0.31	0.49	0.35	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.045346	NA	NA	0.399419	0.508852	NA	0.355	NA	5.4918476
1103	1	235945294	235945294	T	C	exonic	LYST	NA	synonymous SNV	LYST:NM_000081:exon15:c.A4956G:p.L1652L	exonic	ENSG00000143669	NA	synonymous SNV	ENSG00000143669:ENST00000389793:exon15:c.A4956G:p.L1652L,ENSG00000143669:ENST00000389794:exon15:c.A4956G:p.L1652L	NA	NA	1q42.3	NA	NA	Name=33	NA	rs6696123	0.33	0.33	0.325	0.303514	0.4254	0.0655	0.2997	0.4879	0.1769	0.42	0.09	0.31	0.49	0.3501	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.800792	NA	NA	0.399419	0.507717	NA	0.355	NA	5.4917476
1103	20	3624830	3624830	G	A	exonic	ATRN	NA	synonymous SNV	ATRN:NM_139321:exon28:c.G4080A:p.P1360P	exonic	ENSG00000088812	NA	synonymous SNV	ENSG00000088812:ENST00000262919:exon28:c.G4080A:p.P1360P	NA	NA	20p13	Score=871;Name=V$ZID_01	NA	NA	NA	rs2246808	0.36	0.36	0.381	0.382588	0.3917	0.1964	0.3718	0.5855	0.2986	0.38	0.16	0.38	0.55	0.3771	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.962464	NA	NA	0.406279	0.534952	NA	0.326	NA	5.4915876
1103	2	47278901	47278901	G	A	exonic	TTC7A	NA	synonymous SNV	TTC7A:NM_020458:exon18:c.G2034A:p.S678S	exonic	ENSG00000068724	NA	synonymous SNV	ENSG00000068724:ENST00000263737:exon17:c.G972A:p.S324S,ENSG00000068724:ENST00000319190:exon18:c.G2034A:p.S678S,ENSG00000068724:ENST00000394850:exon19:c.G2106A:p.S702S,ENSG00000068724:ENST00000409245:exon19:c.G1932A:p.S644S	NA	NA	2p21	NA	NA	NA	NA	rs3739100	0.19	0.19	0.166	0.183906	0.0378	0.4435	0.1398	0.1566	0.135	0.04	0.48	0.14	0.13	0.1071	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.06543	NA	NA	0.030469	0.157619	NA	0.13	NA	5.4912976
1103	1	161928327	161928327	A	G	exonic	ATF6	NA	synonymous SNV	ATF6:NM_007348:exon16:c.A1896G:p.S632S	exonic	ENSG00000118217	NA	synonymous SNV	ENSG00000118217:ENST00000367942:exon16:c.A1896G:p.S632S	NA	NA	1q23.3	NA	Name=STAT3	Name=38	NA	rs9482	0.6	0.6	0.573	0.558706	0.7763	0.506	0.4928	0.4183	0.6258	0.79	0.51	0.56	0.44	0.654	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.138318	NA	NA	0.745116	0.462778	ID=COSM1335717;OCCURENCE=1(large_intestine)	0.63	NA	5.4912506
1103	1	1916890	1916890	C	T	exonic	KIAA1751	NA	synonymous SNV	KIAA1751:NM_001080484:exon6:c.G435A:p.L145L	intergenic	ENSG00000142609,ENSG00000142609	dist=18925;dist=2511	NA	NA	Score=272;Name=lod=17	NA	1p36.33	Score=857;Name=V$HAND1E47_01	NA	NA	NA	rs3795280	0.43	0.43	0.441	0.438498	0.3082	0.4335	0.2795	0.6573	0.3947	0.31	0.46	0.3	0.67	0.3733	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.450164	NA	NA	0.327524	0.57928	NA	0.507	NA	5.490976
1103	17	37457342	37457342	A	G	intronic	FBXL20	NA	NA	NA	intronic	ENSG00000108306	NA	NA	NA	Score=671;Name=lod=710	NA	17q12	Score=729;Name=V$MEF2_04	NA	NA	NA	rs2302073	0.23	0.23	0.207	0.228834	0.162	0.2431	0.2349	0.3767	0.0787	0.16	0.23	0.21	0.35	0.1775	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.171017	4.171017	NA	0.169651	0.363595	NA	0.203	NA	5.490849
1103	1	1266740	1266740	T	A	exonic	TAS1R3	NA	synonymous SNV	TAS1R3:NM_152228:exon1:c.T15A:p.A5A	exonic	ENSG00000169962	NA	synonymous SNV	ENSG00000169962:ENST00000339381:exon1:c.T15A:p.A5A	NA	NA	1p36.33	NA	NA	NA	NA	rs141430443	0.03	0.03	0.03	0.0189696	0.0626	NA	0.0231	0.0053	0.0092	0.07	NA	0.03	0.0041	0.0479	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.789246	NA	NA	0.065441	0.012984	NA	NA	NA	5.4907256
1103	7	134871775	134871775	C	T	exonic	WDR91	NA	synonymous SNV	WDR91:NM_014149:exon14:c.G2028A:p.S676S	exonic	ENSG00000105875	NA	synonymous SNV	ENSG00000105875:ENST00000354475:exon14:c.G2028A:p.S676S,ENSG00000105875:ENST00000423565:exon14:c.G1923A:p.S641S	NA	NA	7q33	NA	Name=EBF1_(C-8),CHD2_(N-1250),BATF,Oct-2,SP1,Pol2,IRF4_(M-17),MEF2A,BCL11A,YY1_(C-20),TAF1,POU2F2,TCF12,TBP,BCL3,NFKB,CTCF_(C-20),SRF,PAX5-C20,PAX5-N19,Egr-1,Pol2-4H8,Pbx3,EBF	Name=7	NA	rs292557	0.72	0.72	0.707	0.712061	0.7068	0.8214	0.8372	0.4962	0.8078	0.72	0.83	0.82	0.53	0.7428	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.886625	NA	NA	0.726395	0.552882	NA	0.732	NA	5.4906716
1103	14	100847930	100847930	A	G	exonic	WDR25	NA	synonymous SNV	WDR25:NM_001161476:exon2:c.A669G:p.P223P,WDR25:NM_024515:exon2:c.A669G:p.P223P	exonic	ENSG00000176473	NA	synonymous SNV	ENSG00000176473:ENST00000557710:exon1:c.A669G:p.P223P,ENSG00000176473:ENST00000335290:exon2:c.A669G:p.P223P,ENSG00000176473:ENST00000402312:exon2:c.A669G:p.P223P,ENSG00000176473:ENST00000554175:exon2:c.A669G:p.P223P,ENSG00000176473:ENST00000554998:exon2:c.A669G:p.P223P	NA	NA	14q32.2	Score=814;Name=V$SRF_C	NA	Name=3	NA	rs3742387	0.59	0.59	0.583	0.646166	0.7276	0.4742	0.4597	0.649	0.8681	0.73	0.41	0.48	0.66	0.6973	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.022111	NA	NA	0.751512	0.655924	NA	0.696	NA	5.4902546
1103	7	99926522	99926522	A	G	ncRNA_exonic	PMS2P1	NA	NA	NA	ncRNA_intronic	ENSG00000078319	NA	NA	NA	Score=618;Name=lod=433	NA	7q22.1	NA	NA	NA	NA	rs1059129	0.15	0.15	0.126	0.157947	0.1769	0.0278	0.1153	0.3011	0.1094	0.18	0.02	0.11	0.27	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.43415	NA	NA	NA	NA	NA	0.022	NA	5.4897666
1103	15	51237910	51237910	T	C	ncRNA_exonic	DCAF13P3	NA	NA	NA	ncRNA_exonic	ENSG00000259378	NA	NA	NA	Score=677;Name=lod=750	NA	15q21.2	NA	NA	NA	NA	rs11635054	0.14	0.14	0.109	0.156749	0.1769	0.0188	0.2666	0.1634	0.1912	0.16	0.02	0.26	0.14	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.918378	NA	NA	NA	NA	NA	0.181	NA	5.4897666
1103	19	22784069	22784069	G	A	ncRNA_intronic	LOC440518	NA	NA	NA	ncRNA_exonic	ENSG00000269332	NA	NA	NA	Score=578;Name=lod=298	NA	19p12	NA	NA	NA	NA	rs34043019	0.36	0.36	0.337	0.380591	0.1779	0.2927	0.3847	0.6747	0.2791	0.18	0.29	0.36	0.7	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.000069	NA	NA	NA	NA	NA	0.42	NA	5.4887666
1103	17	48557326	48557326	G	A	exonic	RSAD1	NA	nonsynonymous SNV	RSAD1:NM_018346:exon3:c.G355A:p.A119T	exonic	ENSG00000136444	NA	nonsynonymous SNV	ENSG00000136444:ENST00000258955:exon3:c.G355A:p.A119T	NA	NA	17q21.33	NA	NA	NA	NA	rs2290862	0.58	0.58	0.623	0.584465	0.6262	0.2222	0.5807	0.9115	0.4755	0.62	0.22	0.65	0.91	0.592	0.91	0.45	T	0.0	B	0.003	B	0.472	N	1.000	P	-0.515	N	1.96	T	-1.028	T	0.000	T	0.024	1.074	9.385	0.020	-0.048	0.282	6.933	1.074063	NA	0.4	0.626628	0.868134	NA	0.58	NA	5.4885054
1103	19	36831372	36831372	A	G	exonic	ZFP14	NA	synonymous SNV	ZFP14:NM_020917:exon5:c.T1356C:p.Y452Y	exonic	ENSG00000142065	NA	synonymous SNV	ENSG00000142065:ENST00000270001:exon5:c.T1356C:p.Y452Y	NA	NA	19q13.12	NA	NA	NA	NA	rs8110644	0.03	0.03	0.02	0.019369	0.0577	NA	0.0274	0.0061	0.0123	0.05	NA	0.03	0.01	0.0486	0.072	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.150569	NA	NA	0.071977	0.019065	NA	0.007	NA	5.4883896
1103	8	12406714	12406714	T	G	ncRNA_intronic	LOC100506990,LOC729732	NA	NA	NA	intergenic	ENSG00000221714,ENSG00000242607	dist=22364;dist=21145	NA	NA	Score=517;Name=lod=168	NA	8p23.1	NA	Name=GATA-1	NA	NA	rs2970290	NA	NA	0.334	0.534345	0.5119	0.5496	0.5115	0.5651	0.5164	NA	NA	NA	NA	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.254788	NA	NA	NA	NA	NA	0.029	NA	5.4881
1103	5	58147223	58147223	C	A	UTR3	RAB3C	NM_138453:c.*45C>A	NA	NA	ncRNA_UTR3	ENSG00000152932	NA	NA	NA	Score=358;Name=lod=38	NA	5q11.2	NA	NA	NA	NA	rs189904682	0.0023	0.0023	NA	0.00179712	0.007	NA	0.0029	NA	NA	0.004	NA	0.01	NA	0.0024	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.351093	2.351093	NA	0.002791	0.000454	NA	NA	NA	5.487809
1103	15	31110279	31110279	G	A	ncRNA_exonic	HERC2P10	NA	NA	NA	ncRNA_exonic	ENSG00000259845	NA	NA	NA	Score=688;Name=lod=832	NA	15q13.2	NA	NA	NA	NA	rs798112	0.23	0.23	0.221	0.334465	0.1789	0.1647	0.3127	0.6891	0.2055	0.13	0.09	0.28	0.53	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.450815	NA	NA	NA	NA	NA	0.174	NA	5.4877666
1103	4	80905991	80905991	G	T	exonic	ANTXR2	NA	synonymous SNV	ANTXR2:NM_001145794:exon13:c.C1068A:p.P356P,ANTXR2:NM_058172:exon13:c.C1068A:p.P356P	exonic	ENSG00000163297	NA	synonymous SNV	ENSG00000163297:ENST00000346652:exon9:c.C759A:p.P253P,ENSG00000163297:ENST00000307333:exon13:c.C1068A:p.P356P,ENSG00000163297:ENST00000403729:exon13:c.C1068A:p.P356P,ENSG00000163297:ENST00000404191:exon13:c.C837A:p.P279P	NA	NA	4q21.21	NA	NA	NA	NA	rs72653288	0.03	0.03	NA	0.0461262	0.0915	0.0109	0.0519	0.0242	0.0613	0.06	0.01	0.05	0.01	0.0875	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.055255	NA	NA	NA	NA	NA	NA	NA	5.4876666
1103	20	256727	256727	T	A	exonic	C20orf96	NA	nonsynonymous SNV	C20orf96:NM_080571:exon10:c.A910T:p.I304F,C20orf96:NM_153269:exon10:c.A913T:p.I305F	exonic	ENSG00000196476	NA	nonsynonymous SNV	ENSG00000196476:ENST00000382369:exon8:c.A808T:p.I270F,ENSG00000196476:ENST00000360321:exon10:c.A913T:p.I305F	NA	NA	20p13	NA	NA	NA	NA	rs3827147	0.66	0.66	0.669	0.635184	0.6262	0.6935	0.4942	0.7383	0.545	0.64	0.7	0.5	0.74	0.6024	0.74	0.35	T	0.0	B	0.0	B	0.869	N	0.298	P	-1.355	N	1.1	T	-0.989	T	0.000	T	0.042	-0.69	1.003	-1.09	-0.364	0.171	3.58	-0.690171	NA	0.85	0.617442	0.726736	NA	0.659	NA	5.4872914
1103	4	184600571	184600571	C	A	exonic	TRAPPC11	NA	synonymous SNV	TRAPPC11:NM_021942:exon9:c.C897A:p.I299I,TRAPPC11:NM_199053:exon9:c.C897A:p.I299I	exonic	ENSG00000168538	NA	synonymous SNV	ENSG00000168538:ENST00000334690:exon9:c.C897A:p.I299I,ENSG00000168538:ENST00000357207:exon9:c.C897A:p.I299I	NA	NA	4q35.1	NA	NA	NA	NA	rs62357990	0.06	0.06	0.061	0.061901	0.0537	0.1319	0.0389	0.056	0.0225	0.05	0.1	0.04	0.04	0.0592	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.86366	NA	NA	0.066628	0.052655	NA	0.029	NA	5.4871386
1103	5	177642177	177642177	C	T	intronic	AGXT2L2	NA	NA	NA	intronic	ENSG00000175309	NA	NA	NA	NA	NA	5q35.3	NA	Name=Pol2-4H8	Name=2	NA	rs2913748	0.54	0.54	0.542	0.562101	0.5129	0.4633	0.5994	0.621	0.6084	0.52	0.45	0.6	0.63	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.042718	NA	NA	NA	NA	NA	0.529	NA	5.4871
1103	13	24696470	24696470	G	T	intergenic	ANKRD20A19P,SPATA13	dist=173016;dist=38391	NA	NA	ncRNA_exonic	ENSG00000225674	NA	NA	NA	Score=704;Name=lod=972	NA	13q12.12	NA	Name=c-Fos	NA	NA	rs4770591	0.51	0.51	0.474	0.504992	0.5129	0.5446	0.5663	0.3888	0.5695	0.53	0.55	0.56	0.39	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.389681	NA	NA	NA	NA	NA	0.5	NA	5.4871
1103	13	24696492	24696492	A	G	intergenic	ANKRD20A19P,SPATA13	dist=173038;dist=38369	NA	NA	ncRNA_exonic	ENSG00000225674	NA	NA	NA	Score=704;Name=lod=972	NA	13q12.12	NA	Name=c-Fos	NA	NA	rs4769323	0.51	0.51	0.457	0.505391	0.5129	0.5446	0.5677	0.3896	0.5695	0.53	0.55	0.56	0.39	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.864201	NA	NA	NA	NA	NA	0.5	NA	5.4871
1103	5	148206348	148206348	C	T	UTR5	ADRB2	NM_000024:c.-47C>T	NA	NA	UTR5	ENSG00000169252	ENST00000305988:c.-47C>T	NA	NA	Score=352;Name=lod=36	NA	5q32	NA	Name=NFKB,Pol2(b),Pol2	Name=10	NA	rs1042711	0.76	0.76	0.71	0.793131	0.5885	0.9196	0.7579	0.8608	0.8067	0.59	0.92	0.73	0.84	0.6812	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.769843	NA	NA	0.576842	0.810234	NA	0.507	NA	5.4867914
1103	7	1480286	1480286	G	A	exonic	MICALL2	NA	synonymous SNV	MICALL2:NM_182924:exon8:c.C1746T:p.D582D	exonic	ENSG00000164877	NA	synonymous SNV	ENSG00000164877:ENST00000405088:exon4:c.C1110T:p.D370D,ENSG00000164877:ENST00000413446:exon7:c.C1620T:p.D540D,ENSG00000164877:ENST00000297508:exon8:c.C1746T:p.D582D	NA	NA	7p22.3	NA	NA	NA	NA	rs61741872	0.1	0.1	0.098	0.0858626	0.0507	0.0298	0.2104	0.1392	0.0194	0.06	0.05	0.19	0.15	0.0767	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.252555	NA	NA	0.052478	0.131985	NA	0.123	NA	5.4867886
1103	19	22786126	22786126	T	A	ncRNA_exonic	LOC440518	NA	NA	NA	ncRNA_exonic	ENSG00000268823,ENSG00000269332	NA	NA	NA	Score=554;Name=lod=239	NA	19p12	NA	NA	NA	NA	rs2304143	0.36	0.36	0.371	0.384984	0.1799	0.3214	0.3905	0.6619	0.2832	0.18	0.31	0.36	0.67	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.46552	NA	0.01	NA	NA	NA	0.42	NA	5.4867666
1103	22	24938908	24938908	A	G	UTR3	GUCD1	NM_031444:c.*66T>C	NA	NA	UTR3	ENSG00000138867	ENST00000435822:c.*66T>C,ENST00000407471:c.*66T>C,ENST00000398245:c.*66T>C,ENST00000404664:c.*66T>C,ENST00000447813:c.*133T>C,ENST00000402766:c.*133T>C	NA	NA	NA	NA	22q11.23	NA	Name=CTCF,p300,ERalpha_a	Name=11	NA	rs8139822	0.75	0.75	0.732	0.68131	0.8469	0.8492	0.7925	0.4266	0.6033	0.86	0.83	0.79	0.47	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.304644	2.304644	NA	NA	NA	NA	0.268	NA	5.4864334
1103	17	39727816	39727816	T	G	exonic	KRT9	NA	synonymous SNV	KRT9:NM_000226:exon1:c.A429C:p.G143G	exonic	ENSG00000171403	NA	synonymous SNV	ENSG00000171403:ENST00000246662:exon1:c.A429C:p.G143G	NA	NA	17q21.2	NA	NA	NA	NA	rs8075921	0.64	0.64	0.557	NA	NA	NA	NA	NA	NA	0.56	0.95	0.66	0.38	0.6325	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.680222	NA	NA	0.548395	0.41035	NA	0.609	CLINSIG=untested;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000056452.1;CLNDSDB=.;CLNDSDBID=.	5.4857716
1103	19	14574959	14574959	G	A	exonic	PKN1	NA	synonymous SNV	PKN1:NM_002741:exon12:c.G1725A:p.S575S,PKN1:NM_213560:exon12:c.G1743A:p.S581S	exonic	ENSG00000123143	NA	synonymous SNV	ENSG00000123143:ENST00000586237:exon2:c.G183A:p.S61S,ENSG00000123143:ENST00000242783:exon12:c.G1725A:p.S575S,ENSG00000123143:ENST00000342216:exon12:c.G1743A:p.S581S	NA	NA	19p13.12	NA	NA	NA	NA	rs2230538	0.06	0.06	0.055	0.0597045	0.0636	0.0317	0.1182	0.0582	0.045	0.05	0.03	0.11	0.05	0.0621	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.78225	NA	NA	0.055315	0.060284	NA	0.08	NA	5.4856516
1103	8	144995736	144995736	G	A	exonic	PLEC	NA	synonymous SNV	PLEC:NM_201378:exon32:c.C8211T:p.N2737N,PLEC:NM_201379:exon32:c.C8187T:p.N2729N,PLEC:NM_201380:exon32:c.C8664T:p.N2888N,PLEC:NM_201381:exon32:c.C8157T:p.N2719N,PLEC:NM_201382:exon32:c.C8253T:p.N2751N,PLEC:NM_201383:exon32:c.C8265T:p.N2755N,PLEC:NM_201384:exon32:c.C8253T:p.N2751N,PLEC:NM_000445:exon33:c.C8334T:p.N2778N	exonic	ENSG00000178209	NA	synonymous SNV	ENSG00000178209:ENST00000322810:exon32:c.C8664T:p.N2888N,ENSG00000178209:ENST00000345136:exon32:c.C8253T:p.N2751N,ENSG00000178209:ENST00000354589:exon32:c.C8253T:p.N2751N,ENSG00000178209:ENST00000354958:exon32:c.C8187T:p.N2729N,ENSG00000178209:ENST00000356346:exon32:c.C8211T:p.N2737N,ENSG00000178209:ENST00000357649:exon32:c.C8265T:p.N2755N,ENSG00000178209:ENST00000398774:exon32:c.C8157T:p.N2719N,ENSG00000178209:ENST00000527096:exon32:c.C8322T:p.N2774N,ENSG00000178209:ENST00000436759:exon33:c.C8334T:p.N2778N	NA	NA	8q24.3	NA	NA	NA	NA	rs11777402	0.25	0.25	0.219	0.230232	0.4284	0.1419	0.2968	0.0272	0.3446	0.42	0.16	0.3	0.03	0.3446	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.551748	NA	NA	0.408168	0.087994	NA	0.254	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000078899.3;CLNDSDB=.;CLNDSDBID=.	5.4854986
1103	1	179555947	179555947	G	C	intergenic	NPHS2,TDRD5	dist=10863;dist=4801	NA	NA	ncRNA_exonic	ENSG00000227141	NA	NA	NA	Score=764;Name=lod=1703	NA	1q25.2	NA	NA	Name=14	NA	rs4475708	0.56	0.56	0.515	0.567891	0.5149	0.7619	0.5418	0.4244	0.635	0.51	0.79	0.52	0.41	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011895	NA	NA	NA	NA	NA	0.232	NA	5.4851
1104	19	35940721	35940721	G	C	exonic	FFAR2	NA	synonymous SNV	FFAR2:NM_005306:exon1:c.G105C:p.R35R	exonic	ENSG00000126262	NA	synonymous SNV	ENSG00000126262:ENST00000246549:exon1:c.G105C:p.R35R,ENSG00000126262:ENST00000599180:exon2:c.G105C:p.R35R	NA	NA	19q13.12	NA	NA	NA	NA	rs117215242	0.03	0.03	0.025	0.0291534	0.0626	0.002	0.062	0.0038	0.0337	0.06	NA	0.07	0.0041	0.0515	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.352338	NA	NA	0.067907	0.008398	NA	0.072	NA	5.4846596
1104	11	18956194	18956194	T	C	exonic	MRGPRX1	NA	synonymous SNV	MRGPRX1:NM_147199:exon1:c.A138G:p.A46A	exonic	ENSG00000170255	NA	synonymous SNV	ENSG00000170255:ENST00000302797:exon1:c.A138G:p.A46A	NA	NA	11p15.1	NA	NA	Name=4	NA	rs2014931	0.35	0.35	0.315	0.363219	0.4026	0.3075	0.3588	0.3442	0.409	0.4	0.3	0.33	0.34	0.3901	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.308275	NA	NA	0.389666	0.337511	ID=COSM1353107;OCCURENCE=1(large_intestine)	0.42	NA	5.4843006
1104	7	30485710	30485710	A	C	intronic	NOD1	NA	NA	NA	intronic	ENSG00000106100	NA	NA	NA	NA	NA	7p14.3	NA	Name=IRF4_(M-17),MEF2A,YY1_(C-20),SMC3_(ab9263),WHIP,CTCF,Rad21,Max,IRF1,CTCF_(C-20),ZEB1_(SC-25388),NFKB,STAT2,c-Myc	Name=101	NA	rs6958571	0.23	0.23	0.051	0.234225	0.2376	0.2212	0.2997	0.2277	0.2065	0.21	0.24	0.27	0.21	0.247	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.585613	NA	NA	0.031163	0.12256	ID=COSN168000;OCCURENCE=1(large_intestine)	0.058	NA	5.484237
1104	1	11561593	11561593	G	A	exonic	PTCHD2	NA	nonsynonymous SNV	PTCHD2:NM_020780:exon2:c.G544A:p.G182S	exonic	ENSG00000204624	NA	nonsynonymous SNV	ENSG00000204624:ENST00000294484:exon2:c.G544A:p.G182S,ENSG00000204624:ENST00000389575:exon2:c.G544A:p.G182S	NA	NA	1p36.22	NA	NA	NA	NA	rs2817580	0.43	0.43	0.404	0.371805	0.659	0.2718	0.6311	0.143	0.3047	0.66	0.27	0.6	0.14	0.5561	0.66	0.62	T	0.008	B	0.011	B	.	.	1.000	P	0.345	N	1.99	T	-0.987	T	0.000	T	0.063	-0.018	3.922	0.794	0.058	0.106	6.431	-0.017933	NA	0.23	0.634152	0.251836	NA	0.384	NA	5.4840814
1104	5	148206375	148206375	C	T	UTR5	ADRB2	NM_000024:c.-20C>T	NA	NA	UTR5	ENSG00000169252	ENST00000305988:c.-20C>T	NA	NA	Score=378;Name=lod=46	NA	5q32	NA	Name=Pol2	Name=10	NA	rs1801704	0.76	0.76	0.728	0.793131	0.5875	0.9196	0.7579	0.8616	0.8067	0.59	0.92	0.73	0.84	0.6821	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.47281	1.47281	NA	0.57967	0.81616	NA	0.536	NA	5.4840634
1104	3	193068800	193068800	G	A	intronic	ATP13A5	NA	NA	NA	intronic	ENSG00000187527	NA	NA	NA	NA	NA	3q29	NA	Name=SRF	Name=2	NA	rs1038719	0.53	0.53	0.546	0.513978	0.5169	0.3968	0.5202	0.6573	0.4335	0.52	0.43	0.56	0.63	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.277467	NA	NA	NA	NA	NA	0.558	NA	5.4831
1104	11	86270684	86270684	C	T	intronic	ME3	NA	NA	NA	ncRNA_intronic	ENSG00000254733	NA	NA	NA	NA	NA	11q14.2	NA	Name=GR,AP-2gamma	Name=117	NA	rs34249558	0.16	0.16	0.165	0.149161	0.2873	0.0506	0.196	0.0439	0.2178	0.3	0.05	0.22	0.05	0.2488	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.308692	1.308692	NA	0.314143	0.095368	NA	0.297	NA	5.4830903
1104	19	36278470	36278470	C	G	exonic	ARHGAP33	NA	synonymous SNV	ARHGAP33:NM_052948:exon21:c.C2520G:p.A840A	exonic	ENSG00000004777	NA	synonymous SNV	ENSG00000004777:ENST00000007510:exon21:c.C3003G:p.A1001A,ENSG00000004777:ENST00000314737:exon21:c.C2520G:p.A840A	Score=278;Name=lod=18	NA	19q13.12	NA	NA	NA	NA	rs231235	0.54	0.54	0.509	0.534744	0.3688	0.627	0.5879	0.6551	0.41	0.37	0.63	0.56	0.68	0.4522	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.262828	NA	NA	0.362582	0.604205	NA	0.464	NA	5.4830846
1104	14	88414211	88414211	G	A	exonic	GALC	NA	synonymous SNV	GALC:NM_001201401:exon12:c.C1281T:p.S427S,GALC:NM_000153:exon13:c.C1350T:p.S450S,GALC:NM_001201402:exon13:c.C1272T:p.S424S	exonic	ENSG00000054983	NA	synonymous SNV	ENSG00000054983:ENST00000555000:exon8:c.C717T:p.S239S,ENSG00000054983:ENST00000393568:exon12:c.C1281T:p.S427S,ENSG00000054983:ENST00000261304:exon13:c.C1350T:p.S450S,ENSG00000054983:ENST00000393569:exon13:c.C1272T:p.S424S,ENSG00000054983:ENST00000544807:exon13:c.C1182T:p.S394S	NA	NA	14q31.3	NA	NA	NA	NA	rs398076	0.35	0.35	0.343	0.366613	0.4105	0.2302	0.33	0.4387	0.3906	0.4	0.22	0.35	0.43	0.3734	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.043868	NA	NA	0.399833	0.425558	NA	0.297	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000078191.1;CLNDSDB=.;CLNDSDBID=.	5.4829336
1104	12	88470954	88470954	C	G	intronic	CEP290	NA	NA	NA	intronic	ENSG00000198707	NA	NA	NA	NA	NA	12q21.32	NA	Name=MafK_(ab50322)	NA	NA	rs45477793	0.08	0.08	0.096	0.0676917	0.1998	0.001	0.0937	0.0227	0.0429	0.19	0.0017	0.09	0.01	0.1291	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.213647	NA	NA	0.188266	0.04954	NA	0.051	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000114205.2;CLNDSDB=.;CLNDSDBID=.	5.482834
1104	2	32983526	32983526	C	T	exonic	TTC27	NA	synonymous SNV	TTC27:NM_001193509:exon13:c.C1470T:p.N490N,TTC27:NM_017735:exon13:c.C1620T:p.N540N	exonic	ENSG00000018699	NA	synonymous SNV	ENSG00000018699:ENST00000317907:exon13:c.C1620T:p.N540N	Score=556;Name=lod=242	NA	2p22.3	NA	NA	NA	NA	rs2273665	0.34	0.34	0.323	0.292931	0.4125	0.3671	0.3718	0.1536	0.226	0.43	0.35	0.4	0.14	0.3617	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.276189	1.276189	NA	0.410233	0.209487	ID=COSM148836;OCCURENCE=1(stomach)	0.261	NA	5.4822336
1104	10	90585819	90585819	G	A	exonic	ANKRD22	NA	synonymous SNV	ANKRD22:NM_144590:exon4:c.C375T:p.G125G	exonic	ENSG00000152766	NA	synonymous SNV	ENSG00000152766:ENST00000371930:exon4:c.C375T:p.G125G	NA	NA	10q23.31	Score=767;Name=V$HTF_01	NA	NA	NA	rs7893917	0.35	0.35	0.352	0.341254	0.4115	0.4365	0.3458	0.1619	0.41	0.41	0.43	0.36	0.17	0.3867	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.697665	NA	NA	0.386512	0.214253	NA	0.377	NA	5.4819546
1104	8	110592108	110592108	G	A	exonic	SYBU	NA	synonymous SNV	SYBU:NM_001099746:exon4:c.C297T:p.I99I,SYBU:NM_001099749:exon4:c.C297T:p.I99I,SYBU:NM_001099755:exon4:c.C297T:p.I99I,SYBU:NM_001099756:exon4:c.C645T:p.I215I,SYBU:NM_001099753:exon5:c.C651T:p.I217I,SYBU:NM_001099754:exon5:c.C654T:p.I218I,SYBU:NM_001099743:exon6:c.C651T:p.I217I,SYBU:NM_001099744:exon6:c.C654T:p.I218I,SYBU:NM_001099745:exon6:c.C654T:p.I218I,SYBU:NM_001099747:exon6:c.C651T:p.I217I,SYBU:NM_001099748:exon6:c.C654T:p.I218I,SYBU:NM_001099751:exon6:c.C651T:p.I217I,SYBU:NM_001099752:exon6:c.C654T:p.I218I,SYBU:NM_001099750:exon7:c.C654T:p.I218I,SYBU:NM_017786:exon7:c.C651T:p.I217I	exonic	ENSG00000147642	NA	synonymous SNV	ENSG00000147642:ENST00000529175:exon1:c.C36T:p.I12I,ENSG00000147642:ENST00000529690:exon3:c.C264T:p.I88I,ENSG00000147642:ENST00000533394:exon3:c.C165T:p.I55I,ENSG00000147642:ENST00000399066:exon4:c.C645T:p.I215I,ENSG00000147642:ENST00000408889:exon4:c.C297T:p.I99I,ENSG00000147642:ENST00000528045:exon4:c.C297T:p.I99I,ENSG00000147642:ENST00000528331:exon4:c.C297T:p.I99I,ENSG00000147642:ENST00000532779:exon4:c.C450T:p.I150I,ENSG00000147642:ENST00000533065:exon4:c.C297T:p.I99I,ENSG00000147642:ENST00000276646:exon5:c.C654T:p.I218I,ENSG00000147642:ENST00000408908:exon6:c.C654T:p.I218I,ENSG00000147642:ENST00000419099:exon6:c.C651T:p.I217I,ENSG00000147642:ENST00000422135:exon6:c.C654T:p.I218I,ENSG00000147642:ENST00000440310:exon6:c.C654T:p.I218I,ENSG00000147642:ENST00000446070:exon6:c.C651T:p.I217I,ENSG00000147642:ENST00000528647:exon6:c.C651T:p.I217I,ENSG00000147642:ENST00000533171:exon6:c.C654T:p.I218I,ENSG00000147642:ENST00000424158:exon7:c.C669T:p.I223I,ENSG00000147642:ENST00000433638:exon7:c.C654T:p.I218I,ENSG00000147642:ENST00000533895:exon7:c.C651T:p.I217I	NA	NA	8q23.2	NA	NA	NA	NA	rs10085994	0.03	0.03	0.023	0.0205671	0.0706	NA	0.0389	0.0008	0.0041	0.06	NA	0.05	NA	0.0444	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.595484	NA	NA	0.069828	0.015211	NA	0.029	NA	5.4818386
1104	7	64023371	64023371	T	C	UTR5	ZNF680	NM_178558:c.-39A>G,NM_001130022:c.-39A>G	NA	NA	UTR5	ENSG00000173041	ENST00000309683:c.-39A>G,ENST00000447137:c.-39A>G	NA	NA	NA	NA	7q11.21	NA	Name=CHD2_(N-1250),ELF1_(SC-631),TCF4,Pol2(phosphoS2),SP1,Pol2,E2F4,TAF1,IRF1,TBP,NFKB,HEY1,Pol2-4H8,ZNF263,Sin3Ak-20	Name=146	NA	rs6969879	0.37	0.37	0.328	0.368011	0.2744	0.4554	0.3631	0.3449	0.409	0.29	0.49	0.35	0.35	0.313	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.077148	NA	NA	0.264419	0.353836	NA	0.326	NA	5.4815144
1104	12	11338957	11338957	A	G	exonic	TAS2R42	NA	nonsynonymous SNV	TAS2R42:NM_181429:exon1:c.T587C:p.F196S	exonic	ENSG00000186136	NA	nonsynonymous SNV	ENSG00000186136:ENST00000334266:exon1:c.T587C:p.F196S	NA	NA	12p13.2	NA	NA	NA	NA	rs5020531	0.57	0.57	0.505	0.540735	0.6521	0.7569	0.6167	0.1596	0.6646	0.65	0.74	0.64	0.18	0.6022	0.74	1	T	0.0	B	0.0	B	0.077	N	1.000	P	-1.735	N	1.23	T	-0.957	T	0.000	T	0.063	-2.057	0.006	1.59	0.019	-0.141	7.404	-2.057232	NA	1	0.597859	0.219035	NA	0.442	NA	5.4811744
1104	20	36231517	36231517	G	C	intergenic	BLCAP,LINC00489	dist=75184;dist=16183	NA	NA	ncRNA_exonic	ENSG00000228234	NA	NA	NA	Score=304;Name=lod=23	NA	20q11.23	NA	NA	Name=2	NA	rs6066990	0.53	0.53	0.516	0.49361	0.5189	0.6151	0.5749	0.4667	0.3211	0.53	0.64	0.54	0.41	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.863329	NA	NA	NA	NA	NA	0.522	NA	5.4811
1104	1	110709734	110709734	G	A	exonic	SLC6A17	NA	synonymous SNV	SLC6A17:NM_001010898:exon2:c.G183A:p.P61P	exonic	ENSG00000197106	NA	synonymous SNV	ENSG00000197106:ENST00000331565:exon2:c.G183A:p.P61P	NA	NA	1p13.3	NA	NA	NA	NA	rs41281364	0.05	0.05	0.058	0.0389377	0.0606	NA	0.0548	0.0598	0.0174	0.06	NA	0.08	0.09	0.0536	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.250486	1.250486	NA	0.071512	0.049705	NA	0.029	NA	5.4809546
1104	11	62751911	62751911	C	A	exonic	SLC22A6	NA	synonymous SNV	SLC22A6:NM_004790:exon1:c.G252T:p.P84P,SLC22A6:NM_153276:exon1:c.G252T:p.P84P,SLC22A6:NM_153277:exon1:c.G252T:p.P84P,SLC22A6:NM_153278:exon1:c.G252T:p.P84P	exonic	ENSG00000197901	NA	synonymous SNV	ENSG00000197901:ENST00000360421:exon1:c.G252T:p.P84P,ENSG00000197901:ENST00000377871:exon1:c.G252T:p.P84P,ENSG00000197901:ENST00000421062:exon1:c.G252T:p.P84P,ENSG00000197901:ENST00000458333:exon1:c.G252T:p.P84P,ENSG00000197901:ENST00000540654:exon1:c.G252T:p.P84P	NA	NA	11q12.3	NA	NA	NA	NA	rs11568628	0.04	0.04	0.038	0.0229633	0.0676	0.005	0.0303	0.0061	0.0133	0.07	0.01	0.04	0.01	0.0495	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.046594	NA	NA	0.068753	0.015902	NA	0.087	NA	5.4808136
1104	20	33572979	33572979	C	T	intronic	MYH7B	NA	NA	NA	intronic	ENSG00000078814	NA	NA	NA	NA	NA	20q11.22	NA	Name=CTCF	Name=11	NA	rs3746448	0.14	0.14	0.149	0.135184	0.1759	0.1438	0.111	0.0318	0.2413	0.18	0.17	0.12	0.04	0.1696	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.014036	NA	NA	0.173716	0.063387	NA	0.225	NA	5.480784
1104	20	44596545	44596545	G	A	exonic	ZNF335	NA	synonymous SNV	ZNF335:NM_022095:exon5:c.C642T:p.S214S	exonic	ENSG00000198026	NA	synonymous SNV	ENSG00000198026:ENST00000426788:exon2:c.C177T:p.S59S,ENSG00000198026:ENST00000322927:exon5:c.C642T:p.S214S	NA	NA	20q13.12	NA	NA	NA	NA	rs3848719	0.22	0.22	0.215	0.185703	0.4254	NA	0.3084	0.0749	0.1933	0.43	NA	0.34	0.07	0.3313	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.468527	NA	NA	0.429751	0.146391	ID=COSM443920;OCCURENCE=1(breast)	0.312	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118924.2;CLNDSDB=.;CLNDSDBID=.	5.4802156
1104	3	8543601	8543601	G	A	UTR5	LMCD1	NM_014583:c.-24G>A	NA	NA	ncRNA_UTR5	ENSG00000071282	NA	NA	NA	NA	NA	3p26.1	NA	Name=TAF1,E2F6_(H-50),HA-E2F1,ZNF263,E2F6,Pol2,PAX5-C20,SETDB1,Max,Nrf1	NA	NA	rs74997575	0.0018	0.0018	0.001	0.00119808	0.005	NA	NA	NA	0.001	0.01	NA	NA	NA	0.0061	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.655654	3.655654	NA	0.008721	0.002951	NA	NA	NA	5.480179
1104	8	22422150	22422150	A	G	intronic	SORBS3	NA	NA	NA	intronic	ENSG00000120896	NA	NA	NA	NA	NA	8p21.3	NA	Name=FOXA1_(C-20),CTCF,Max,NRSF	Name=18	NA	rs3758038	0.38	0.38	0.369	0.369209	0.5199	0.2173	0.366	0.3018	0.4642	0.52	0.22	0.41	0.32	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.455904	NA	NA	NA	NA	NA	0.428	NA	5.4801
1104	6	29695808	29695808	A	G	ncRNA_intronic	HLA-F-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000214922	NA	NA	NA	NA	NA	6p22.1	NA	Name=Pol2-4H8	NA	NA	rs55672647	0.06	0.06	0.046	0.0756789	0.0586	0.1567	0.0375	0.0008	0.138	0.06	0.14	0.03	0.002	0.0695	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.927788	NA	NA	0.058513	0.014269	NA	0.087	NA	5.4800536
1104	15	23052632	23052632	T	C	exonic	NIPA1	NA	synonymous SNV	NIPA1:NM_001142275:exon4:c.A216G:p.T72T,NIPA1:NM_144599:exon4:c.A441G:p.T147T	exonic	ENSG00000170113	NA	synonymous SNV	ENSG00000170113:ENST00000337435:exon4:c.A441G:p.T147T,ENSG00000170113:ENST00000437912:exon4:c.A216G:p.T72T,ENSG00000170113:ENST00000561183:exon4:c.A216G:p.T72T	NA	NA	15q11.2	Score=871;Name=V$PAX3_01	NA	NA	NA	rs11263683	0.7	0.7	0.64	0.704073	0.7157	0.8026	0.8098	0.4478	0.862	0.71	0.81	0.79	0.47	0.7359	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.074633	NA	NA	0.735233	0.494553	NA	0.725	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117820.2;CLNDSDB=.;CLNDSDBID=.	5.4798336
1104	7	1480280	1480280	C	T	exonic	MICALL2	NA	synonymous SNV	MICALL2:NM_182924:exon8:c.G1752A:p.P584P	exonic	ENSG00000164877	NA	synonymous SNV	ENSG00000164877:ENST00000405088:exon4:c.G1116A:p.P372P,ENSG00000164877:ENST00000413446:exon7:c.G1626A:p.P542P,ENSG00000164877:ENST00000297508:exon8:c.G1752A:p.P584P	NA	NA	7p22.3	NA	NA	NA	NA	rs58636013	0.1	0.1	0.106	0.0976438	0.0507	0.0298	0.2176	0.18	0.0194	0.06	0.05	0.2	0.18	0.0816	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.037475	NA	NA	0.054573	0.174693	NA	0.145	NA	5.4797936
1104	22	32887150	32887150	C	T	exonic	FBXO7	NA	synonymous SNV	FBXO7:NM_001033024:exon6:c.C712T:p.L238L,FBXO7:NM_001257990:exon6:c.C607T:p.L203L,FBXO7:NM_012179:exon6:c.C949T:p.L317L	exonic	ENSG00000100225	NA	synonymous SNV	ENSG00000100225:ENST00000266087:exon6:c.C949T:p.L317L,ENSG00000100225:ENST00000382058:exon6:c.C712T:p.L238L,ENSG00000100225:ENST00000397426:exon6:c.C607T:p.L203L	Score=590;Name=lod=333	NA	22q12.3	NA	NA	NA	NA	rs9726	0.49	0.49	0.479	0.48762	0.3748	0.6925	0.5663	0.4039	0.4499	0.39	0.69	0.53	0.37	0.44	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.972695	NA	NA	0.372209	0.37222	ID=COSM149284;OCCURENCE=1(stomach)	0.435	NA	5.4796576
1104	14	106845417	106845417	C	T	intergenic	LINC00226,LINC00221	dist=100451;dist=93038	NA	NA	exonic	ENSG00000211957	NA	nonsynonymous SNV	ENSG00000211957:ENST00000390617:exon2:c.G257A:p.R86Q	Score=369;Name=lod=42	NA	14q32.33	NA	NA	NA	NA	rs112759551	0.12	0.12	0.098	0.147764	0.1183	0.0288	0.1671	0.2118	0.2004	0.11	0.03	0.17	0.2	0.1278	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.165618	NA	0.01	0.10786	0.178771	ID=COSN229344;OCCURENCE=1(skin)	0.203	NA	5.4793734
1104	X	322161	322161	A	G	exonic	PPP2R3B	NA	synonymous SNV	PPP2R3B:NM_013239:exon2:c.T489C:p.D163D	exonic	ENSG00000167393	NA	synonymous SNV	ENSG00000167393:ENST00000381625:exon2:c.T405C:p.D135D,ENSG00000167393:ENST00000390665:exon2:c.T489C:p.D163D	Score=610;Name=lod=401	NA	Xp22.33	NA	NA	NA	NA	rs3813594	0.62	0.62	0.57949	NA	NA	NA	NA	NA	NA	0.62	0.55	0.62	0.67	0.592	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.861388	NA	NA	0.595328	0.683379	NA	0.696	NA	5.4793386
1104	2	132796355	132796355	C	T	intergenic	C2orf27B,ANKRD30BL	dist=237121;dist=108809	NA	NA	upstream	ENSG00000226886	NA	NA	NA	NA	NA	2q21.2	NA	Name=SUZ12,Egr-1	Name=9	NA	rs377611223	NA	NA	NA	0.00658946	0.0209	NA	0.0029	NA	0.0102	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.632745	1.632745	NA	NA	NA	NA	0.007	NA	5.4791
1104	1	212799949	212799949	C	T	exonic	FAM71A	NA	nonsynonymous SNV	FAM71A:NM_153606:exon1:c.C1730T:p.T577M	exonic	ENSG00000162771	NA	nonsynonymous SNV	ENSG00000162771:ENST00000294829:exon1:c.C1730T:p.T577M	NA	NA	1q32.3	NA	NA	NA	NA	rs3795842	0.47	0.47	0.465	0.485024	0.6451	0.4514	0.3156	0.3359	0.6769	0.66	0.37	0.4	0.34	0.5754	0.66	0.44	T	0.0	B	0.0	B	.	.	1.000	P	-1.1	N	3.88	T	-1.091	T	0.000	T	0.033	0.879	8.564	1.7	0.057	0.072	3.795	0.878561	NA	0.67	0.63407	0.39015	NA	0.384	NA	5.4787634
1104	4	187629770	187629770	A	C	exonic	FAT1	NA	nonsynonymous SNV	FAT1:NM_005245:exon2:c.T1212G:p.S404R	exonic	ENSG00000083857	NA	nonsynonymous SNV	ENSG00000083857:ENST00000441802:exon2:c.T1212G:p.S404R,ENSG00000083857:ENST00000509647:exon2:c.T1212G:p.S404R	NA	NA	4q35.2	NA	NA	NA	NA	rs3733414	0.43	0.43	0.395	0.398962	0.6441	0.2242	0.5677	0.2073	0.4663	0.65	0.22	0.59	0.24	0.5576	0.65	0.43	T	0.134	B	0.032	B	0.001	N	1.000	P	0.865	L	0.07	T	-0.899	T	0.000	T	0.399	0.533	6.886	1.45	0.115	0.621	9.222	0.533021	NA	0.24	0.652907	0.30172	NA	0.384	NA	5.4787264
1104	16	89628870	89628870	C	G	intronic	RPL13	NA	NA	NA	intronic	ENSG00000167526	NA	NA	NA	NA	NA	16q24.3	NA	Name=Pol2,Sin3Ak-20,c-Myc	Name=62	NA	rs885268	0.15	0.15	NA	0.148363	0.161	0.128	0.1196	0.171	0.1462	0.16	0.13	0.13	0.18	0.1765	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.528475	NA	NA	0.183847	0.186416	NA	0.116	NA	5.478653
1104	21	37502950	37502950	G	T	intergenic	LOC100133286,CBR3-AS1	dist=4012;dist=1115	NA	NA	ncRNA_exonic	ENSG00000226054	NA	NA	NA	Score=786;Name=lod=2092	NA	21q22.12	NA	Name=ZNF263	NA	NA	rs2242801	0.44	0.44	0.429	0.399561	0.5219	0.4385	0.5274	0.2678	0.3211	0.53	0.44	0.5	0.28	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.299704	NA	NA	NA	NA	NA	0.457	NA	5.4781
1104	19	12061271	12061271	C	T	UTR3	ZNF700	NM_144566:c.*203C>T,NM_001271848:c.*203C>T	NA	NA	ncRNA_UTR3	ENSG00000196757,ENSG00000267179	NA	NA	NA	NA	NA	19p13.2	NA	Name=SETDB1	NA	NA	rs77673544	0.01	0.01	0.009	0.0139776	0.0229	0.0089	0.0144	0.003	0.0245	0.02	0.01	0.02	0.0041	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.702124	NA	NA	NA	NA	NA	NA	NA	5.4771
1104	19	12061272	12061272	G	A	UTR3	ZNF700	NM_144566:c.*204G>A,NM_001271848:c.*204G>A	NA	NA	ncRNA_UTR3	ENSG00000196757,ENSG00000267179	NA	NA	NA	NA	NA	19p13.2	NA	Name=SETDB1	NA	NA	rs74917756	0.01	0.01	0.008	0.0133786	0.0229	0.006	0.0144	0.003	0.0245	0.02	0.01	0.02	0.0041	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.726605	NA	NA	NA	NA	NA	NA	NA	5.4771
1104	20	1703106	1703106	T	C	intergenic	SIRPG,LOC100289473	dist=64681;dist=50905	NA	NA	ncRNA_exonic	ENSG00000234282	NA	NA	NA	NA	NA	20p13	NA	Name=USF-1,TCF12,NFKB,EBF,BATF,RXRA,EBF1_(C-8),IRF4_(M-17),MEF2A,PU.1,ATF3,SP1,MEF2C_(SC-13268)	Name=15	NA	rs202511	0.48	0.48	0.47	0.473842	0.5229	0.369	0.5951	0.503	0.4059	0.51	0.4	0.54	0.47	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.340585	NA	NA	NA	NA	NA	0.5	NA	5.4771
1104	9	117668142	117668142	C	T	exonic	TNFSF8	NA	synonymous SNV	TNFSF8:NM_001244:exon3:c.G276A:p.R92R,TNFSF8:NM_001252290:exon3:c.G276A:p.R92R	exonic	ENSG00000106952	NA	synonymous SNV	ENSG00000106952:ENST00000223795:exon3:c.G276A:p.R92R	NA	NA	9q32	NA	NA	Name=15	NA	rs3181195	0.33	0.33	0.287	0.329073	0.4016	0.245	0.5	0.1974	0.3978	0.4	0.27	0.47	0.22	0.3822	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.798704	NA	NA	0.40593	0.246028	NA	0.304	NA	5.4769366
1104	13	51736083	51736083	G	A	ncRNA_intronic	LINC00371	NA	NA	NA	ncRNA_exonic	ENSG00000214878	NA	NA	NA	Score=754;Name=lod=1550	NA	13q14.3	NA	NA	NA	NA	rs7318961	0.17	0.17	0.156	0.140176	0.1899	0.2609	0.1902	0.0416	0.0624	0.21	0.24	0.17	0.05	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.149239	NA	NA	NA	NA	NA	0.13	NA	5.4767666
1104	9	34917851	34917851	G	A	intergenic	FAM205B,KIAA1045	dist=79268;dist=40341	NA	NA	ncRNA_exonic	ENSG00000178723	NA	NA	NA	Score=793;Name=lod=2230	NA	9p13.3	NA	Name=TCF4	NA	NA	rs2279790	0.42	0.42	0.4	0.372804	0.5239	0.3462	0.4798	0.3048	0.2607	0.51	0.36	0.45	0.31	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.649895	NA	NA	NA	NA	NA	0.565	NA	5.4761
1104	9	34917869	34917869	G	A	intergenic	FAM205B,KIAA1045	dist=79286;dist=40323	NA	NA	ncRNA_exonic	ENSG00000178723	NA	NA	NA	Score=793;Name=lod=2230	NA	9p13.3	NA	Name=TCF4	NA	NA	rs2279791	0.42	0.42	0.388	0.373003	0.5239	0.3462	0.4798	0.3048	0.2618	0.51	0.36	0.45	0.31	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.755761	1.755761	NA	NA	NA	NA	0.565	NA	5.4761
1104	15	64706332	64706332	A	G	exonic	TRIP4	NA	synonymous SNV	TRIP4:NM_016213:exon8:c.A1092G:p.P364P	exonic	ENSG00000103671	NA	synonymous SNV	ENSG00000103671:ENST00000261884:exon8:c.A1092G:p.P364P	NA	NA	15q22.31	NA	NA	NA	NA	rs34758599	0.03	0.03	0.028	0.0355431	0.0686	0.001	0.0259	0.003	0.0879	0.07	NA	0.02	0.0041	0.06	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.981261	NA	NA	0.062558	0.012029	NA	0.065	NA	5.4755086
1104	1	4772053	4772053	T	C	exonic	AJAP1	NA	synonymous SNV	AJAP1:NM_001042478:exon2:c.T123C:p.C41C,AJAP1:NM_018836:exon2:c.T123C:p.C41C	exonic	ENSG00000196581	NA	synonymous SNV	ENSG00000196581:ENST00000378190:exon2:c.T123C:p.C41C,ENSG00000196581:ENST00000378191:exon2:c.T123C:p.C41C	Score=381;Name=lod=47	NA	1p36.32	NA	NA	NA	NA	rs1061968	0.48	0.48	0.455	0.526757	0.3668	0.6567	0.5014	0.5212	0.5828	0.38	0.62	0.48	0.45	0.4616	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.170577	NA	NA	0.363063	0.505023	ID=COSM426406;OCCURENCE=1(breast)	0.362	NA	5.4752036
1104	21	27945141	27945141	G	A	intronic	CYYR1	NA	NA	NA	intronic	ENSG00000166265	NA	NA	NA	NA	NA	21q21.3	NA	Name=SUZ12,Pol2-4H8	Name=40	NA	rs62216535	0.24	0.24	0.256	0.257188	0.17	0.12	0.2248	0.5325	0.1391	0.17	0.13	0.22	0.49	0.1922	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.839829	NA	NA	0.16275	0.464351	NA	0.348	NA	5.47505
1105	3	187416719	187416719	T	C	exonic	RTP2	NA	nonsynonymous SNV	RTP2:NM_001004312:exon2:c.A245G:p.Q82R	exonic	ENSG00000198471	NA	nonsynonymous SNV	ENSG00000198471:ENST00000358241:exon2:c.A245G:p.Q82R	NA	NA	3q27.3	NA	NA	NA	NA	rs11707167	0.53	0.53	0.49	0.496805	0.6402	0.7361	0.5865	0.0499	0.6431	0.62	0.76	0.58	0.08	0.5998	0.76	0.35	T	0.001	B	0.004	B	0.574	N	1.000	P	1.155	L	2.46	T	-1.041	T	0.000	T	0.015	-0.624	1.232	1.92	0.104	-0.539	7.772	-0.623756	NA	0.2	0.618721	0.160009	NA	0.493	NA	5.4746124
1105	10	44111800	44111800	T	C	exonic	ZNF485	NA	synonymous SNV	ZNF485:NM_145312:exon5:c.T309C:p.S103S	exonic	ENSG00000198298	NA	synonymous SNV	ENSG00000198298:ENST00000374437:exon3:c.T36C:p.S12S,ENSG00000198298:ENST00000361807:exon5:c.T309C:p.S103S,ENSG00000198298:ENST00000374435:exon5:c.T309C:p.S103S,ENSG00000198298:ENST00000430885:exon5:c.T309C:p.S103S	NA	NA	10q11.21	NA	NA	NA	NA	rs17447580	0.05	0.05	0.044	0.0405351	0.0805	0.001	0.0303	0.0424	0.045	0.08	0.0017	0.03	0.06	0.0503	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.1115	NA	NA	0.061279	0.032002	NA	0.051	NA	5.4745876
1105	18	29487567	29487567	C	A	exonic	TRAPPC8	NA	synonymous SNV	TRAPPC8:NM_014939:exon9:c.G1245T:p.P415P	exonic	ENSG00000153339	NA	synonymous SNV	ENSG00000153339:ENST00000283351:exon9:c.G1245T:p.P415P,ENSG00000153339:ENST00000582513:exon9:c.G1245T:p.P415P,ENSG00000153339:ENST00000582539:exon9:c.G1083T:p.P361P,ENSG00000153339:ENST00000580104:exon10:c.G1245T:p.P415P	NA	NA	18q12.1	NA	NA	NA	NA	rs34176695	0.05	0.05	0.053	0.0529153	0.0636	0.0109	0.0447	0.0877	0.044	0.07	0.01	0.03	0.1	0.0618	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.289854	NA	NA	0.066977	0.083749	NA	0.072	NA	5.4742896
1105	22	32754232	32754232	C	T	exonic	RFPL3	NA	synonymous SNV	RFPL3:NM_001098535:exon1:c.C174T:p.T58T,RFPL3:NM_006604:exon2:c.C87T:p.T29T	exonic	ENSG00000128276	NA	synonymous SNV	ENSG00000128276:ENST00000249007:exon1:c.C174T:p.T58T,ENSG00000128276:ENST00000382088:exon1:c.C87T:p.T29T,ENSG00000128276:ENST00000397468:exon2:c.C87T:p.T29T	NA	NA	22q12.3	NA	NA	NA	NA	rs57606003	0.14	0.14	0.088	0.144569	0.0408	0.4583	0.0893	0.0265	0.1268	0.04	0.42	0.09	0.02	0.0991	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.327962	NA	NA	0.052674	0.037449	NA	NA	NA	5.4740926
1105	5	179036357	179036357	G	A	intronic	RUFY1	NA	NA	NA	intronic	ENSG00000176783	NA	NA	NA	NA	NA	5q35.3	NA	Name=Pol2-4H8,ZNF263,Pol2(phosphoS2),Pol2	Name=61	NA	rs7448707	0.34	0.34	0.322	NA	NA	NA	NA	NA	NA	0.19	0.67	0.37	0.18	0.3026	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.763954	NA	NA	0.223605	0.19882	NA	0.268	NA	5.473795
1105	5	126507009	126507009	A	T	intergenic	C5orf63,MEGF10	dist=97825;dist=119447	NA	NA	ncRNA_exonic	ENSG00000250080	NA	NA	NA	Score=591;Name=lod=337	NA	5q23.2	NA	NA	Name=5	NA	rs248076	0.47	0.47	0.501	0.452676	0.5268	0.3571	0.3963	0.5234	0.4192	0.51	0.39	0.45	0.52	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.119026	NA	NA	NA	NA	NA	0.42	NA	5.4732
1105	3	177418132	177418132	G	A	ncRNA_intronic	LINC00578	NA	NA	NA	ncRNA_intronic	ENSG00000228221	NA	NA	NA	Score=638;Name=lod=524	NA	3q26.32	NA	NA	NA	NA	rs36055300	0.18	0.18	0.163	0.16254	0.1938	0.1806	0.1902	0.1127	0.1595	0.19	0.22	0.16	0.11	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.142713	NA	NA	NA	NA	NA	0.123	NA	5.4728666
1105	7	138719231	138719231	T	C	intronic	ZC3HAV1L	NA	NA	NA	intronic	ENSG00000146858	NA	NA	NA	NA	NA	7q34	NA	Name=c-Fos,c-Jun	Name=33	NA	rs7810237	0.52	0.52	0.557	0.546326	0.5278	0.3442	0.3646	0.7799	0.5869	0.53	0.36	0.41	0.77	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.479565	NA	NA	NA	NA	NA	0.471	NA	5.4722
1105	3	167167186	167167186	T	A	exonic	SERPINI2	NA	synonymous SNV	SERPINI2:NM_006217:exon7:c.A969T:p.S323S,SERPINI2:NM_001012303:exon8:c.A999T:p.S333S	exonic	ENSG00000114204	NA	synonymous SNV	ENSG00000114204:ENST00000471111:exon6:c.A969T:p.S323S,ENSG00000114204:ENST00000264677:exon7:c.A969T:p.S323S,ENSG00000114204:ENST00000461846:exon7:c.A969T:p.S323S,ENSG00000114204:ENST00000476257:exon8:c.A969T:p.S323S	Score=366;Name=lod=41	NA	3q26.1	NA	NA	NA	NA	rs6770577	0.39	0.39	0.369	0.370807	0.4095	0.3859	0.3761	0.3026	0.4039	0.41	0.4	0.4	0.35	0.3955	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.309411	NA	NA	0.389884	0.311394	NA	0.362	NA	5.4717826
1105	9	7799606	7799606	C	A	exonic	C9orf123	NA	synonymous SNV	C9orf123:NM_033428:exon1:c.G129T:p.L43L	exonic	ENSG00000137038	NA	synonymous SNV	ENSG00000137038:ENST00000358227:exon1:c.G129T:p.L43L	NA	NA	9p24.1	NA	Name=TAF7_(SQ-8),Pol2(phosphoS2),Pol2,ELK4,ZEB1_(SC-25388)	NA	NA	rs14059	0.38	0.38	0.364	0.377196	0.3897	0.38	0.5389	0.267	0.3957	0.38	0.36	0.55	0.28	0.4091	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.703104	NA	NA	0.396163	0.278938	NA	0.181	NA	5.4717036
1105	19	43690506	43690506	G	C	exonic	PSG5	NA	nonsynonymous SNV	PSG5:NM_001130014:exon1:c.C52G:p.L18V,PSG5:NM_002781:exon1:c.C52G:p.L18V	exonic	ENSG00000204941	NA	nonsynonymous SNV	ENSG00000204941:ENST00000342951:exon1:c.C52G:p.L18V,ENSG00000204941:ENST00000366175:exon1:c.C52G:p.L18V,ENSG00000204941:ENST00000404580:exon1:c.C52G:p.L18V,ENSG00000204941:ENST00000407356:exon1:c.C52G:p.L18V,ENSG00000204941:ENST00000407568:exon1:c.C52G:p.L18V,ENSG00000204941:ENST00000599812:exon1:c.C52G:p.L18V	NA	NA	19q13.31	NA	NA	NA	NA	rs8107936	0.64	0.64	0.674	0.730631	0.6123	0.9762	0.5749	0.7481	0.6861	0.54	0.91	0.49	0.59	0.6487	0.91	0.09	T	0.254	B	0.424	B	.	.	1.000	P	1.03	L	5.01	T	-1.113	T	0.000	T	0.087	-0.071	3.655	0.325	0.166	0.008	3.712	-0.070693	NA	0.07	0.600978	0.722878	ID=COSM1564387;OCCURENCE=1(large_intestine)	0.558	NA	5.4713554
1105	1	11288758	11288758	G	A	exonic	MTOR	NA	synonymous SNV	MTOR:NM_004958:exon19:c.C2997T:p.N999N	exonic	ENSG00000198793	NA	synonymous SNV	ENSG00000198793:ENST00000361445:exon19:c.C2997T:p.N999N	Score=558;Name=lod=246	NA	1p36.22	Score=955;Name=V$CREBP1CJUN_01	NA	NA	NA	rs1064261	0.7	0.7	0.667	0.700479	0.7237	0.9187	0.8141	0.3351	0.865	0.73	0.91	0.8	0.33	0.7429	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.782447	NA	NA	0.728721	0.40059	NA	0.696	NA	5.4713456
1105	19	4454000	4454000	G	A	exonic	UBXN6	NA	synonymous SNV	UBXN6:NM_001171091:exon2:c.C15T:p.A5A,UBXN6:NM_025241:exon2:c.C174T:p.A58A	exonic	ENSG00000167671	NA	synonymous SNV	ENSG00000167671:ENST00000301281:exon2:c.C174T:p.A58A,ENSG00000167671:ENST00000394765:exon2:c.C15T:p.A5A,ENSG00000167671:ENST00000592515:exon2:c.C102T:p.A34A	NA	NA	19p13.3	Score=821;Name=V$AP4_01	NA	NA	NA	rs11909	0.33	0.33	0.298	0.312101	0.4115	0.2867	0.2205	0.2595	0.3722	0.43	0.29	0.24	0.28	0.3798	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.143379	NA	NA	0.404164	0.290286	NA	0.297	NA	5.4712026
1105	1	237144731	237144731	G	C	intergenic	MTR,MT1HL1	dist=77450;dist=22672	NA	NA	ncRNA_exonic	ENSG00000237991	NA	NA	NA	Score=712;Name=lod=1047	NA	1q43	NA	NA	Name=2	NA	rs6671297	0.45	0.45	0.37	0.426118	0.5288	0.5417	0.4769	0.2088	0.4591	0.53	0.5	0.46	0.24	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.187364	NA	NA	NA	NA	NA	0.471	NA	5.4712
1105	11	308178	308178	T	C	UTR5	IFITM2	NM_006435:c.-15T>C	NA	NA	UTR5	ENSG00000185201	ENST00000399817:c.-15T>C	NA	NA	NA	NA	11p15.5	NA	Name=GABP,TAF1,PU.1,Pol2,FOXA2_(SC-6554),ELF1_(SC-631),FOXA1_(SC-101058),CEBPB,CTCF,Pol2-4H8,Sin3Ak-20,STAT3,HEY1,STAT2,TBP	Name=133	NA	rs1058873	0.43	0.43	0.39	0.473642	0.2664	0.6935	0.3977	0.4418	0.5573	0.26	0.69	0.37	0.43	0.3571	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.59231	NA	NA	0.239136	0.349825	NA	0.101	NA	5.4706974
1105	19	18368969	18368969	G	A	intronic	KIAA1683	NA	NA	NA	intronic	ENSG00000130518	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs999814	0.22	0.22	0.179	0.185503	0.2724	0.2371	0.3314	0.0189	0.1646	0.29	0.23	0.29	0.04	0.257	0.29	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.969	T	0.000	T	.	0.192	5.036	-0.424	0.158	1.160	5.262	0.192248	NA	0.01	NA	NA	NA	0.217	NA	5.4706
1105	16	1268013	1268013	G	C	exonic	CACNA1H	NA	synonymous SNV	CACNA1H:NM_001005407:exon31:c.G5400C:p.T1800T,CACNA1H:NM_021098:exon32:c.G5418C:p.T1806T	exonic	ENSG00000196557	NA	synonymous SNV	ENSG00000196557:ENST00000565831:exon30:c.G5400C:p.T1800T,ENSG00000196557:ENST00000358590:exon31:c.G5400C:p.T1800T,ENSG00000196557:ENST00000348261:exon32:c.G5418C:p.T1806T	NA	NA	16p13.3	NA	NA	NA	NA	rs57135930	0.03	0.03	0.02	0.0327476	0.0557	NA	0.0375	NA	0.0838	0.06	NA	0.04	NA	0.0799	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.057193	NA	NA	0.060473	0.008954	ID=COSM434636,COSM434637;OCCURENCE=1(breast)	0.043	NA	5.4705936
1105	8	144240257	144240257	C	G	exonic	LY6H	NA	synonymous SNV	LY6H:NM_001135655:exon3:c.G213C:p.T71T,LY6H:NM_002347:exon3:c.G150C:p.T50T,LY6H:NM_001130478:exon4:c.G213C:p.T71T	exonic	ENSG00000176956	NA	synonymous SNV	ENSG00000176956:ENST00000342752:exon3:c.G213C:p.T71T,ENSG00000176956:ENST00000430474:exon3:c.G150C:p.T50T,ENSG00000176956:ENST00000414417:exon4:c.G213C:p.T71T	Score=429;Name=lod=74	NA	8q24.3	NA	NA	NA	NA	rs9694368	0.35	0.35	0.36	0.321486	0.3917	0.2768	0.2968	0.3101	0.3282	0.39	0.3	0.33	0.37	0.3765	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.954637	NA	NA	0.427907	0.312074	ID=COSM150559;OCCURENCE=1(stomach)	0.471	NA	5.4705596
1105	19	9271969	9271969	C	A	exonic	ZNF317	NA	synonymous SNV	ZNF317:NM_001190791:exon6:c.C1552A:p.R518R,ZNF317:NM_020933:exon7:c.C1648A:p.R550R	exonic	ENSG00000130803	NA	synonymous SNV	ENSG00000130803:ENST00000360385:exon6:c.C1552A:p.R518R,ENSG00000130803:ENST00000247956:exon7:c.C1648A:p.R550R	NA	NA	19p13.2	NA	NA	NA	NA	rs9305035	0.1	0.1	0.088	0.091254	0.0527	0.0972	0.0836	0.1536	0.046	0.06	0.1	0.09	0.18	0.0748	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.444213	NA	NA	0.068837	0.150477	NA	0.101	NA	5.4703296
1105	7	100549865	100549865	C	T	intergenic	ACHE,MUC12	dist=56324;dist=63039	NA	NA	exonic	ENSG00000228273	NA	nonsynonymous SNV	ENSG00000228273:ENST00000379458:exon2:c.C446T:p.T149M	NA	NA	7q22.1	NA	NA	NA	NA	rs35420758	0.12	0.12	0.097	0.113818	0.2177	0.0278	0.121	0.1437	0.0501	0.19	0.02	0.12	0.12	0.1456	0.19	0.07	T	.	.	.	.	.	.	.	.	0.55	N	.	.	-1.030	T	0.000	T	0.199	1.845	12.13	-0.735	-0.249	0.791	4.119	1.844996	1.844996	0.05	NA	NA	NA	0.087	NA	5.4700334
1105	6	47649574	47649574	A	G	exonic	GPR111	NA	nonsynonymous SNV	GPR111:NM_153839:exon7:c.A1075G:p.K359E	exonic	ENSG00000164393	NA	nonsynonymous SNV	ENSG00000164393:ENST00000398742:exon5:c.A1075G:p.K359E,ENSG00000164393:ENST00000296862:exon6:c.A1279G:p.K427E,ENSG00000164393:ENST00000507065:exon6:c.A1075G:p.K359E,ENSG00000164393:ENST00000467205:exon7:c.A1075G:p.K359E	NA	NA	6p12.3	NA	NA	NA	NA	rs10807372	0.38	0.38	0.468	0.509385	0.6272	0.3085	0.4323	0.4448	0.7372	0.49	0.26	0.44	0.33	0.5908	0.65	0.17	T	0.009	B	0.015	B	0.407	N	1.000	P	0.55	N	2.06	T	-1.016	T	0.018	T	0.095	0.843	8.406	1.64	0.401	0.485	1.345	0.843036	NA	0.32	0.645419	0.45464	NA	NA	NA	5.4699144
1105	12	8386911	8386911	G	A	ncRNA_exonic	FAM86FP	NA	NA	NA	ncRNA_exonic	ENSG00000164845	NA	NA	NA	Score=340;Name=lod=32	NA	12p13.31	NA	NA	NA	NA	rs2968743	0.34	0.34	0.263	0.408546	0.1968	0.5278	0.4121	0.4569	0.4356	0.19	0.47	0.38	0.41	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.323272	NA	NA	NA	NA	NA	NA	NA	5.4698666
1105	17	4608389	4608389	A	C	upstream	PELP1	NA	NA	NA	ncRNA_exonic	ENSG00000213939	NA	NA	NA	Score=715;Name=lod=1070	NA	17p13.2	NA	Name=Pol2	NA	NA	rs7210729	0.69	0.69	0.678	0.695288	0.6968	0.8284	0.7219	0.4849	0.8221	0.72	0.85	0.72	0.45	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.853567	NA	NA	NA	NA	NA	0.572	NA	5.4698666
1105	22	22661181	22661181	C	G	ncRNA_exonic	LOC96610	NA	NA	NA	ncRNA_exonic	ENSG00000236850	NA	NA	NA	Score=707;Name=lod=995	NA	22q11.22	NA	NA	NA	NA	rs73880611	NA	NA	0.005	0.132188	0.1968	NA	0.1037	0.233	0.0859	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.555475	NA	NA	NA	NA	NA	0.007	NA	5.4698666
1105	5	179050188	179050188	A	C	intronic	HNRNPH1	NA	NA	NA	UTR5	ENSG00000169045	ENST00000356731:c.-54T>G,ENST00000506721:c.-54T>G,ENST00000504348:c.-54T>G	NA	NA	NA	NA	5q35.3	NA	Name=HMGN3,TAF1,HA-E2F1,Pol2-4H8,Pol2,HEY1	Name=132	NA	rs1136267	0.45	0.45	0.389	0.502196	0.3479	0.7321	0.5389	0.2859	0.6902	0.34	0.74	0.49	0.25	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.194025	NA	NA	0.349151	0.315751	NA	0.362	NA	5.4696157
1105	2	29366646	29366646	C	T	exonic	CLIP4	NA	synonymous SNV	CLIP4:NM_024692:exon7:c.C720T:p.A240A	exonic	ENSG00000115295	NA	synonymous SNV	ENSG00000115295:ENST00000401617:exon6:c.C399T:p.A133A,ENSG00000115295:ENST00000320081:exon7:c.C720T:p.A240A,ENSG00000115295:ENST00000401605:exon7:c.C720T:p.A240A,ENSG00000115295:ENST00000404424:exon7:c.C720T:p.A240A,ENSG00000115295:ENST00000415891:exon7:c.C720T:p.A240A	NA	NA	2p23.2	NA	NA	NA	NA	rs35024908	0.04	0.04	0.035	0.0301518	0.0765	NA	0.0303	0.0318	0.0112	0.08	NA	0.05	0.03	0.0519	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.974149	NA	NA	0.068837	0.035633	NA	0.007	NA	5.4694296
1105	5	178194296	178194296	T	A	ncRNA_exonic	AACSP1	NA	NA	NA	ncRNA_exonic	ENSG00000250420	NA	NA	NA	Score=599;Name=lod=362	NA	5q35.3	NA	NA	NA	NA	rs60234391	0.12	0.12	0.124	0.100439	0.1978	0.001	0.1398	0.1127	0.0583	0.19	0.01	0.16	0.12	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.337924	NA	NA	NA	NA	NA	0.225	NA	5.4688666
1105	18	77208922	77208922	C	T	exonic	NFATC1	NA	synonymous SNV	NFATC1:NM_172388:exon3:c.C111T:p.A37A,NFATC1:NM_006162:exon4:c.C1527T:p.A509A,NFATC1:NM_172387:exon4:c.C1488T:p.A496A,NFATC1:NM_172389:exon4:c.C1488T:p.A496A,NFATC1:NM_172390:exon4:c.C1527T:p.A509A	exonic	ENSG00000131196	NA	synonymous SNV	ENSG00000131196:ENST00000397790:exon3:c.C111T:p.A37A,ENSG00000131196:ENST00000545796:exon3:c.C111T:p.A37A,ENSG00000131196:ENST00000253506:exon4:c.C1527T:p.A509A,ENSG00000131196:ENST00000318065:exon4:c.C1488T:p.A496A,ENSG00000131196:ENST00000329101:exon4:c.C1488T:p.A496A,ENSG00000131196:ENST00000427363:exon4:c.C1527T:p.A509A,ENSG00000131196:ENST00000542384:exon4:c.C1527T:p.A509A,ENSG00000131196:ENST00000586434:exon4:c.C1488T:p.A496A,ENSG00000131196:ENST00000587635:exon4:c.C1527T:p.A509A,ENSG00000131196:ENST00000591814:exon4:c.C1527T:p.A509A,ENSG00000131196:ENST00000592223:exon4:c.C1488T:p.A496A	NA	NA	18q23	NA	NA	NA	NA	rs25657	0.07	0.07	0.077	0.0820687	0.0596	0.0863	0.0346	0.0998	0.1104	0.06	0.09	0.04	0.1	0.0717	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.760077	NA	NA	0.066977	0.080799	NA	0.072	NA	5.4683896
1105	5	32074509	32074509	G	A	exonic	PDZD2	NA	synonymous SNV	PDZD2:NM_178140:exon17:c.G3297A:p.T1099T	exonic	ENSG00000133401	NA	synonymous SNV	ENSG00000133401:ENST00000282493:exon17:c.G3297A:p.T1099T,ENSG00000133401:ENST00000438447:exon18:c.G3297A:p.T1099T	NA	NA	5p13.3	NA	NA	NA	NA	rs2291113	0.1	0.1	0.084	0.0986422	0.0507	0.2232	0.1066	0.0318	0.1043	0.05	0.24	0.08	0.03	0.0794	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.050253	NA	NA	0.068256	0.045847	NA	0.065	NA	5.4683106
1105	9	115933885	115933885	A	C	exonic	FKBP15	NA	synonymous SNV	FKBP15:NM_015258:exon24:c.T2634G:p.A878A	exonic	ENSG00000119321	NA	synonymous SNV	ENSG00000119321:ENST00000238256:exon24:c.T2634G:p.A878A,ENSG00000119321:ENST00000446284:exon24:c.T2709G:p.A903A	NA	NA	9q32	NA	NA	NA	NA	rs1128118	0.05	0.05	0.054	0.0832668	0.0477	0.0387	0.0403	0.112	0.1575	0.05	0.02	0.04	0.11	0.0878	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.878741	NA	NA	0.062969	0.113123	NA	0.101	NA	5.4681976
1105	6	25916979	25916979	C	T	exonic	SLC17A2	NA	synonymous SNV	SLC17A2:NM_005835:exon8:c.G864A:p.L288L	exonic	ENSG00000112337	NA	synonymous SNV	ENSG00000112337:ENST00000265425:exon7:c.G864A:p.L288L,ENSG00000112337:ENST00000360488:exon8:c.G864A:p.L288L,ENSG00000112337:ENST00000377850:exon8:c.G864A:p.L288L	Score=493;Name=lod=134	NA	6p22.2	NA	NA	NA	NA	rs1865760	0.43	0.43	0.385	0.40016	0.4026	0.6964	0.4568	0.143	0.3998	0.39	0.71	0.41	0.16	0.4071	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.825761	NA	NA	0.389535	0.185429	NA	0.246	NA	5.4674316
1105	20	61467800	61467800	A	G	intronic	COL9A3	NA	NA	NA	intronic	ENSG00000092758	NA	NA	NA	NA	NA	20q13.33	NA	Name=Egr-1	Name=44	NA	rs760087	0.24	0.24	0.212	0.223043	0.1849	0.4683	0.2795	0.0885	0.1513	0.17	0.43	0.28	0.08	0.1888	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.189656	NA	NA	0.159884	0.102587	NA	0.181	NA	5.466416
1105	7	152373252	152373252	C	G	upstream	XRCC2	NA	NA	NA	upstream	ENSG00000196584	NA	NA	NA	NA	NA	7q36.1	NA	Name=ELF1_(SC-631),Max,CHD2_(N-1250),E2F6_(H-50),TAF1,GABP,HMGN3,E2F4,ATF3,Mxi1_(bHLH),NRSF,SP1,Pol2,E2F6,eGFP-JunD,BRCA1_(C-1863),HEY1,NFKB,AP-2gamma,CCNT2,c-Myc,PAX5-C20,Nrf1,IRF1,TBP,AP-2alpha,Pol2(b),ELK4,Egr-1,YY1,RFX5_(N-494),Pol2-4H8,E2F1,GATA-2,ZNF263,c-Jun,HA-E2F1,Sin3Ak-20	Name=148	NA	rs3218384	0.15	0.15	0.14	0.145567	0.2008	0.1488	0.1225	0.0514	0.229	0.21	0.15	0.15	0.07	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.095697	NA	NA	NA	NA	NA	0.094	NA	5.4658666
1105	20	3842984	3842984	C	T	exonic	MAVS	NA	synonymous SNV	MAVS:NM_001206491:exon4:c.C126T:p.D42D,MAVS:NM_020746:exon5:c.C549T:p.D183D	exonic	ENSG00000088888	NA	synonymous SNV	ENSG00000088888:ENST00000416600:exon4:c.C126T:p.D42D,ENSG00000088888:ENST00000428216:exon5:c.C549T:p.D183D	NA	NA	20p13	NA	NA	NA	NA	rs2326369	0.14	0.14	0.141	0.146366	0.0507	0.247	0.0922	0.2156	0.0859	0.05	0.23	0.1	0.21	0.0926	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.740325	1.740325	0	0.057674	0.188833	NA	0.094	NA	5.4656926
1105	5	178416288	178416288	G	A	exonic	GRM6	NA	synonymous SNV	GRM6:NM_000843:exon5:c.C1131T:p.D377D	exonic	ENSG00000113262	NA	synonymous SNV	ENSG00000113262:ENST00000231188:exon5:c.C1131T:p.D377D,ENSG00000113262:ENST00000517717:exon6:c.C1131T:p.D377D	NA	NA	5q35.3	Score=925;Name=V$HSF2_01	NA	NA	NA	rs2071246	0.74	0.74	0.738	0.721645	0.7455	0.6974	0.6772	0.7791	0.6759	0.75	0.7	0.68	0.81	0.7241	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.392522	NA	NA	0.73186	0.748979	NA	0.79	CLINSIG=untested;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000086022.1;CLNDSDB=.;CLNDSDBID=.	5.4652066
1105	14	75137664	75137664	T	C	intronic	AREL1	NA	NA	NA	intronic	ENSG00000119682	NA	NA	NA	NA	NA	14q24.3	NA	Name=CTCF,c-Fos	Name=77	NA	rs2302832	0.39	0.39	0.371	0.342452	0.5348	0.5397	0.4294	0.0257	0.3078	0.54	0.5	0.41	0.04	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.903832	NA	NA	NA	NA	NA	0.471	NA	5.4652
1106	4	175688138	175688138	A	G	exonic	GLRA3	NA	synonymous SNV	GLRA3:NM_001042543:exon3:c.T243C:p.F81F,GLRA3:NM_006529:exon3:c.T243C:p.F81F	exonic	ENSG00000145451	NA	synonymous SNV	ENSG00000145451:ENST00000274093:exon3:c.T243C:p.F81F,ENSG00000145451:ENST00000340217:exon3:c.T243C:p.F81F	Score=596;Name=lod=354	NA	4q34.1	Score=898;Name=V$ZID_01	NA	NA	NA	rs7696263	0.8	0.8	0.727	0.790735	0.7445	0.998	0.7305	0.6694	0.8313	0.74	0.98	0.75	0.73	0.7763	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.383381	1.383381	NA	0.68093	0.669542	NA	0.768	NA	5.4649366
1106	14	90429749	90429749	A	G	exonic	TDP1	NA	synonymous SNV	TDP1:NM_001008744:exon2:c.A291G:p.Q97Q,TDP1:NM_018319:exon3:c.A291G:p.Q97Q	exonic	ENSG00000042088	NA	synonymous SNV	ENSG00000042088:ENST00000555880:exon1:c.A291G:p.Q97Q,ENSG00000042088:ENST00000393454:exon2:c.A291G:p.Q97Q,ENSG00000042088:ENST00000545686:exon2:c.A291G:p.Q97Q,ENSG00000042088:ENST00000553989:exon2:c.A291G:p.Q97Q,ENSG00000042088:ENST00000554180:exon2:c.A291G:p.Q97Q,ENSG00000042088:ENST00000555178:exon2:c.A291G:p.Q97Q,ENSG00000042088:ENST00000556498:exon2:c.A291G:p.Q97Q,ENSG00000042088:ENST00000556867:exon2:c.A291G:p.Q97Q,ENSG00000042088:ENST00000335725:exon3:c.A291G:p.Q97Q,ENSG00000042088:ENST00000393452:exon3:c.A291G:p.Q97Q,ENSG00000042088:ENST00000553527:exon3:c.A291G:p.Q97Q,ENSG00000042088:ENST00000554976:exon3:c.A291G:p.Q97Q	NA	NA	14q32.11	NA	NA	NA	NA	rs3825663	0.23	0.23	0.242	0.270567	0.0398	0.0357	0.1254	0.8207	0.1094	0.04	0.04	0.14	0.8	0.116	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.083569	NA	NA	0.04593	0.688379	NA	0.283	NA	5.4649366
1106	7	99569394	99569394	G	A	exonic	AZGP1	NA	synonymous SNV	AZGP1:NM_001185:exon2:c.C312T:p.I104I	exonic	ENSG00000160862	NA	synonymous SNV	ENSG00000160862:ENST00000292401:exon2:c.C312T:p.I104I,ENSG00000160862:ENST00000411734:exon2:c.C303T:p.I101I	Score=425;Name=lod=71	NA	7q22.1	NA	NA	NA	NA	rs17295356	0.4	0.4	0.376	0.374401	0.4105	0.6409	0.4885	0.0734	0.3885	0.41	0.66	0.43	0.07	0.3987	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.174885	NA	NA	0.392558	0.133227	NA	0.37	NA	5.4649086
1106	3	10067651	10067651	C	T	ncRNA_intronic	CIDECP	NA	NA	NA	ncRNA_intronic	ENSG00000186162	NA	NA	NA	NA	NA	3p25.3	NA	Name=ERRA,c-Myc	NA	NA	rs2075310	0.33	0.33	0.359	0.358227	0.2018	0.0685	0.2608	0.8555	0.2147	0.2	0.1	0.28	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.080137	NA	NA	NA	NA	NA	0.522	NA	5.4648666
1106	5	115298977	115298977	C	T	exonic	AQPEP	NA	synonymous SNV	AQPEP:NM_173800:exon1:c.C663T:p.F221F	exonic	ENSG00000172901	NA	synonymous SNV	ENSG00000172901:ENST00000357872:exon1:c.C663T:p.F221F,ENSG00000172901:ENST00000504467:exon1:c.C663T:p.F221F	Score=309;Name=lod=24	NA	5q23.1	NA	NA	NA	NA	rs1445708	0.37	0.37	0.317	0.389177	0.3917	0.4246	0.4265	0.2708	0.4836	0.38	0.4	0.45	0.26	0.4201	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.101795	NA	NA	0.390007	0.258314	ID=COSM448466;OCCURENCE=1(breast)	0.391	NA	5.4648596
1106	1	118629599	118629599	G	A	exonic	SPAG17	NA	synonymous SNV	SPAG17:NM_206996:exon11:c.C1392T:p.P464P	exonic	ENSG00000155761	NA	synonymous SNV	ENSG00000155761:ENST00000336338:exon11:c.C1392T:p.P464P	NA	NA	1p12	NA	NA	NA	NA	rs12142616	0.11	0.11	0.104	0.131789	0.0596	0.2847	0.0461	0.0749	0.1861	0.06	0.24	0.05	0.09	0.0855	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.872265	NA	NA	0.05686	0.076941	NA	0.043	NA	5.4647066
1106	17	6659324	6659324	A	G	UTR5	XAF1	NM_199139:c.-74A>G,NM_017523:c.-74A>G	NA	NA	UTR5	ENSG00000132530	ENST00000575369:c.-74A>G,ENST00000574394:c.-74A>G,ENST00000438512:c.-74A>G,ENST00000441631:c.-74A>G,ENST00000346752:c.-74A>G,ENST00000361842:c.-74A>G	NA	NA	NA	NA	17p13.1	NA	Name=STAT1,Pol2,YY1_(C-20),TAF1,TBP,STAT2,NFKB,YY1,Pol2-4H8	Name=93	NA	rs3785793	0.56	0.56	0.582	0.607228	0.4294	0.6071	0.4827	0.8268	0.5818	0.41	0.59	0.48	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.456459	NA	NA	0.439975	0.758671	NA	0.565	NA	5.4639584
1106	11	6129152	6129152	T	C	exonic	OR56B4	NA	synonymous SNV	OR56B4:NM_001005181:exon1:c.T144C:p.N48N	exonic	ENSG00000180919	NA	synonymous SNV	ENSG00000180919:ENST00000316529:exon1:c.T144C:p.N48N	NA	NA	11p15.4	NA	NA	NA	NA	rs4758387	0.13	0.13	0.138	0.170927	0.0517	0.0506	0.098	0.4297	0.1196	0.06	0.06	0.09	0.37	0.0943	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.37103	NA	NA	0.056797	0.355747	ID=COSM1355220;OCCURENCE=1(large_intestine)	0.145	NA	5.4638696
1106	8	10467588	10467588	T	C	exonic	RP1L1	NA	synonymous SNV	RP1L1:NM_178857:exon4:c.A4020G:p.E1340E	exonic	ENSG00000183638	NA	synonymous SNV	ENSG00000183638:ENST00000382483:exon4:c.A4020G:p.E1340E	NA	NA	8p23.1	NA	NA	NA	NA	rs78920388	NA	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.004248	NA	NA	NA	NA	NA	NA	NA	5.4638666
1106	13	25517634	25517634	C	T	ncRNA_intronic	TPTE2P1	NA	NA	NA	ncRNA_intronic	ENSG00000253771	NA	NA	NA	NA	NA	13q12.13	NA	Name=MafK_(ab50322)	NA	NA	rs73164317	0.19	0.19	0.194	0.238219	0.2028	0.0833	0.1499	0.3359	0.365	0.19	0.09	0.19	0.32	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.392495	NA	NA	NA	NA	NA	0.254	NA	5.4638666
1106	12	52710309	52710309	G	A	exonic	KRT83	NA	synonymous SNV	KRT83:NM_002282:exon6:c.C984T:p.N328N	exonic	ENSG00000170523	NA	synonymous SNV	ENSG00000170523:ENST00000293670:exon6:c.C984T:p.N328N	NA	NA	12q13.13	Score=924;Name=V$CDPCR3HD_01	NA	NA	NA	rs2257286	0.36	0.36	0.33	0.375799	0.4095	0.1885	0.317	0.5008	0.407	0.4	0.19	0.33	0.51	0.3828	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.396025	NA	NA	0.41054	0.489333	ID=COSM147523;OCCURENCE=1(stomach)	0.413	NA	5.4638266
1106	9	19622268	19622268	T	C	exonic	SLC24A2	NA	synonymous SNV	SLC24A2:NM_001193288:exon2:c.A960G:p.P320P,SLC24A2:NM_020344:exon2:c.A960G:p.P320P	exonic	ENSG00000155886	NA	synonymous SNV	ENSG00000155886:ENST00000286344:exon2:c.A960G:p.P320P,ENSG00000155886:ENST00000341998:exon2:c.A960G:p.P320P	Score=505;Name=lod=150	NA	9p22.1	NA	NA	Name=2	NA	rs4977308	0.79	0.79	0.776	0.78155	0.7227	0.8671	0.8156	0.7542	0.7669	0.73	0.89	0.8	0.77	0.7604	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.460515	NA	NA	0.720349	0.757149	NA	0.725	NA	5.4632176
1106	4	10117728	10117728	G	A	intronic	WDR1	NA	NA	NA	intronic	ENSG00000071127	NA	NA	NA	NA	NA	4p16.1	NA	Name=Pol2,Pol2-4H8,Sin3Ak-20,TAF7_(SQ-8),TAF1,TBP,c-Myc,NF-YB	Name=143	NA	rs35782983	0.12	0.12	0.09	0.131989	0.1779	0.0268	0.2579	0.0877	0.1636	0.17	0.02	0.25	0.09	0.1691	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.340691	1.340691	NA	0.189962	0.080816	NA	0.101	NA	5.463038
1106	3	38647642	38647642	G	T	intronic	SCN5A	NA	NA	NA	intronic	ENSG00000183873	NA	NA	NA	Score=448;Name=lod=88	NA	3p22.2	NA	NA	NA	NA	rs41312433	0.15	0.15	0.13	0.151158	0.1799	0.0972	0.1859	0.121	0.1933	0.18	0.1	0.18	0.12	0.1722	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.906763	1.906763	NA	0.184956	0.12675	NA	0.123	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000041595.1|RCV000127965.1;CLNDSDB=.|.;CLNDSDBID=.|.	5.462944
1106	10	72025954	72025954	G	A	exonic	NPFFR1	NA	synonymous SNV	NPFFR1:NM_022146:exon2:c.C201T:p.I67I	exonic	ENSG00000148734	NA	synonymous SNV	ENSG00000148734:ENST00000449957:exon1:c.C195T:p.I65I,ENSG00000148734:ENST00000277942:exon2:c.C201T:p.I67I	NA	NA	10q22.1	NA	NA	NA	NA	rs3812696	0.08	0.08	0.088	0.0623003	0.0815	0.131	0.0403	0.0303	0.0307	0.08	0.14	0.04	0.03	0.0583	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.686179	NA	NA	0.064109	0.041029	NA	0.036	NA	5.4627576
1106	19	44352688	44352688	G	A	exonic	ZNF283	NA	synonymous SNV	ZNF283:NM_181845:exon7:c.G1935A:p.E645E	exonic	ENSG00000167637	NA	synonymous SNV	ENSG00000167637:ENST00000588797:exon6:c.G1518A:p.E506E,ENSG00000167637:ENST00000324461:exon7:c.G1935A:p.E645E	Score=376;Name=lod=45	NA	19q13.31	NA	NA	NA	NA	rs2883946	0.35	0.35	0.359	0.38738	0.3976	0.2401	0.2478	0.4493	0.544	0.41	0.24	0.3	0.42	0.4015	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.338839	NA	NA	0.405363	0.426636	NA	0.377	NA	5.4622036
1106	4	39482942	39482942	A	C	ncRNA_exonic	LOC401127	NA	NA	NA	ncRNA_exonic	ENSG00000224097	NA	NA	NA	Score=782;Name=lod=2004	NA	4p14	NA	NA	NA	NA	rs10010309	0.21	0.21	0.218	0.212061	0.2048	0.0754	0.1816	0.4206	0.1002	0.2	0.07	0.16	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.016033	NA	NA	NA	NA	NA	0.29	NA	5.4618666
1106	4	57237683	57237683	G	A	exonic	AASDH	NA	synonymous SNV	AASDH:NM_181806:exon5:c.C795T:p.S265S	exonic	ENSG00000157426	NA	synonymous SNV	ENSG00000157426:ENST00000513376:exon4:c.C495T:p.S165S,ENSG00000157426:ENST00000602986:exon4:c.C336T:p.S112S,ENSG00000157426:ENST00000205214:exon5:c.C795T:p.S265S,ENSG00000157426:ENST00000451613:exon5:c.C795T:p.S265S,ENSG00000157426:ENST00000502617:exon5:c.C795T:p.S265S	Score=460;Name=lod=99	NA	4q12	NA	NA	NA	NA	rs6554354	0.28	0.28	0.277	0.277955	0.4155	0.0724	0.2939	0.2829	0.3303	0.42	0.06	0.31	0.28	0.3635	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.904582	NA	NA	0.426047	0.291421	ID=COSM1131103;OCCURENCE=1(prostate)	0.29	NA	5.4616196
1106	9	104152790	104152790	G	C	exonic	MRPL50	NA	synonymous SNV	MRPL50:NM_019051:exon2:c.C435G:p.A145A	exonic	ENSG00000136897	NA	synonymous SNV	ENSG00000136897:ENST00000374865:exon2:c.C435G:p.A145A	NA	NA	9q31.1	NA	NA	NA	NA	rs8394	0.06	0.06	0.052	0.0676917	0.0736	0.1071	0.0375	0.0136	0.1155	0.07	0.1	0.04	0.02	0.0669	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.399234	NA	NA	0.064625	0.017265	NA	0.08	NA	5.4615416
1106	15	57753867	57753867	C	A	intronic	CGNL1	NA	NA	NA	intronic	ENSG00000128849	NA	NA	NA	NA	NA	15q21.3	NA	Name=GATA3_(SC-268),ERalpha_a	Name=7	NA	rs1511951	0.14	0.14	0.147	0.137979	0.1819	0.0764	0.1138	0.1649	0.137	0.19	0.09	0.1	0.15	0.1682	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.470772	NA	NA	0.188374	0.171077	NA	0.065	NA	5.461526
1106	7	930608	930608	G	A	exonic	GET4	NA	synonymous SNV	GET4:NM_015949:exon5:c.G510A:p.A170A	exonic	ENSG00000239857	NA	synonymous SNV	ENSG00000239857:ENST00000426056:exon3:c.G393A:p.A131A,ENSG00000239857:ENST00000407192:exon4:c.G351A:p.A117A,ENSG00000239857:ENST00000265857:exon5:c.G510A:p.A170A,ENSG00000239857:ENST00000412734:exon5:c.G351A:p.A117A	NA	NA	7p22.3	NA	NA	NA	NA	rs11543223	0.06	0.06	0.059	0.058107	0.0765	NA	0.0346	0.1172	0.0358	0.09	NA	0.05	0.12	0.0619	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.598573	NA	NA	0.067093	0.129142	NA	0.094	NA	5.4611736
1106	19	3762698	3762698	C	T	UTR5	MRPL54	NM_172251:c.-1C>T	NA	NA	UTR5	ENSG00000183617	ENST00000330133:c.-1C>T	NA	NA	Score=346;Name=lod=34	NA	19p13.3	NA	Name=Pol2(b),JunD,ELK4,Egr-1,YY1,STAT3,Pol2-4H8,Sin3Ak-20,NFKB,c-Myc,ZBTB7A_(SC-34508),SIX5,SRF,USF-1,THAP1_(SC-98174),IRF1,TBP,Znf143_(16618-1-AP),ETS1,TAF1,GATA-1,GABP,POU2F2,TCF4,Pol2,eGFP-JunD,BCLAF1_(M33-P5B11),YY1_(C-20),BRCA1_(C-1863),ELF1_(SC-631),Max,Oct-2,CEBPB,GTF2F1_(RAP-74)	Name=146	NA	rs13960	0.61	0.61	0.567	0.595248	0.6272	0.6647	0.5865	0.4697	0.6667	0.63	0.67	0.6	0.49	0.6146	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.010163	NA	NA	0.630581	0.511348	NA	0.536	NA	5.4609524
1106	6	25779392	25779392	A	G	exonic	SLC17A4	NA	synonymous SNV	SLC17A4:NM_005495:exon12:c.A1470G:p.K490K	exonic	ENSG00000146039	NA	synonymous SNV	ENSG00000146039:ENST00000439485:exon7:c.A780G:p.K260K,ENSG00000146039:ENST00000377905:exon12:c.A1470G:p.K490K	NA	NA	6p22.2	NA	NA	NA	NA	rs9358890	0.2	0.2	0.17	0.194289	0.0398	0.4921	0.245	0.0408	0.2178	0.05	0.54	0.19	0.04	0.1202	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.331134	NA	NA	0.045814	0.047208	NA	0.08	NA	5.4608526
1106	12	14649196	14649196	A	G	exonic	ATF7IP	NA	synonymous SNV	ATF7IP:NM_018179:exon14:c.A3312G:p.T1104T	exonic	ENSG00000171681	NA	synonymous SNV	ENSG00000171681:ENST00000540793:exon13:c.A3312G:p.T1104T,ENSG00000171681:ENST00000261168:exon14:c.A3312G:p.T1104T,ENSG00000171681:ENST00000536444:exon14:c.A3309G:p.T1103T,ENSG00000171681:ENST00000544627:exon14:c.A3336G:p.T1112T	NA	NA	12p13.1	NA	NA	NA	NA	rs61754409	0.06	0.06	0.033	0.0597045	0.0557	NA	0.2983	0.0045	0.0307	0.06	NA	0.23	0.01	0.0831	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.067845	NA	NA	0.067093	0.01566	NA	0.029	NA	5.4607736
1106	7	156469190	156469190	A	G	exonic	RNF32	NA	synonymous SNV	RNF32:NM_001184996:exon9:c.A930G:p.A310A,RNF32:NM_001184997:exon9:c.A930G:p.A310A,RNF32:NM_030936:exon9:c.A930G:p.A310A	exonic	ENSG00000105982	NA	synonymous SNV	ENSG00000105982:ENST00000343665:exon7:c.A858G:p.A286A,ENSG00000105982:ENST00000317955:exon9:c.A930G:p.A310A,ENSG00000105982:ENST00000392743:exon9:c.A930G:p.A310A,ENSG00000105982:ENST00000432459:exon9:c.A930G:p.A310A,ENSG00000105982:ENST00000405335:exon10:c.A930G:p.A310A	NA	NA	7q36.3	NA	Name=Pol2	NA	NA	rs2302145	0.54	0.54	0.576	0.532348	0.4006	0.5248	0.4597	0.8646	0.2781	0.42	0.54	0.43	0.82	0.4279	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.153586	NA	NA	0.377442	0.774626	NA	0.029	NA	5.4607246
1106	6	157963743	157963743	G	A	exonic	ZDHHC14	NA	synonymous SNV	ZDHHC14:NM_024630:exon2:c.G372A:p.T124T,ZDHHC14:NM_153746:exon2:c.G372A:p.T124T	exonic	ENSG00000175048	NA	synonymous SNV	ENSG00000175048:ENST00000359775:exon2:c.G372A:p.T124T,ENSG00000175048:ENST00000414563:exon2:c.G372A:p.T124T	Score=284;Name=lod=19	NA	6q25.3	NA	NA	NA	NA	rs2365611	0.39	0.39	0.36	0.396965	0.4016	0.3839	0.4856	0.3457	0.4121	0.42	0.37	0.44	0.34	0.4127	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.98839	NA	NA	0.392059	0.356332	NA	0.478	NA	5.4603076
1106	11	1651595	1651595	G	A	exonic	KRTAP5-5	NA	synonymous SNV	KRTAP5-5:NM_001001480:exon1:c.G525A:p.Q175Q	exonic	ENSG00000185940	NA	synonymous SNV	ENSG00000185940:ENST00000399676:exon1:c.G525A:p.Q175Q	NA	NA	11p15.5	NA	NA	NA	NA	rs138562325	0.07	0.07	0.035	0.0726837	0.1044	0.003	0.0893	0.1331	0.0184	0.09	NA	0.08	0.09	0.0006	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.904936	NA	NA	0.101443	0.133288	NA	NA	NA	5.4602236
1106	4	104082349	104082349	C	T	exonic	CENPE	NA	synonymous SNV	CENPE:NM_001813:exon20:c.G2025A:p.Q675Q	exonic	ENSG00000138778	NA	synonymous SNV	ENSG00000138778:ENST00000380026:exon19:c.G1950A:p.Q650Q,ENSG00000138778:ENST00000265148:exon20:c.G2025A:p.Q675Q,ENSG00000138778:ENST00000503705:exon20:c.G2025A:p.Q675Q	Score=512;Name=lod=160	NA	4q24	NA	NA	NA	NA	rs2251634	0.43	0.43	0.432	0.45008	0.4076	0.3006	0.353	0.674	0.4141	0.42	0.27	0.37	0.68	0.4063	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.089363	NA	NA	0.392741	0.586739	NA	0.5	NA	5.4600256
1106	19	53345076	53345076	T	C	exonic	ZNF468	NA	synonymous SNV	ZNF468:NM_001008801:exon4:c.A471G:p.E157E	exonic	ENSG00000204604	NA	synonymous SNV	ENSG00000204604:ENST00000390651:exon4:c.A312G:p.E104E,ENSG00000204604:ENST00000595646:exon4:c.A471G:p.E157E,ENSG00000204604:ENST00000396409:exon5:c.A312G:p.E104E	NA	NA	19q13.41	NA	NA	NA	NA	rs61747369	0.08	0.08	0.072	NA	NA	NA	NA	NA	NA	0.11	0.05	0.09	0.08	0.1068	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.582881	NA	NA	0.099884	0.084203	NA	0.13	NA	5.4599826
1106	4	9998440	9998440	C	T	exonic	SLC2A9	NA	synonymous SNV	SLC2A9:NM_020041:exon3:c.G375A:p.T125T,SLC2A9:NM_001001290:exon4:c.G288A:p.T96T	exonic	ENSG00000109667	NA	synonymous SNV	ENSG00000109667:ENST00000264784:exon3:c.G375A:p.T125T,ENSG00000109667:ENST00000309065:exon4:c.G288A:p.T96T,ENSG00000109667:ENST00000513129:exon4:c.G288A:p.T96T,ENSG00000109667:ENST00000506583:exon5:c.G288A:p.T96T	NA	NA	4p16.1	NA	Name=FOSL2	Name=43	NA	rs10939650	0.66	0.66	0.665	0.642173	0.7525	0.506	0.5821	0.6944	0.6411	0.76	0.51	0.62	0.7	0.7054	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.716594	NA	NA	0.749419	0.683613	ID=COSM149644;OCCURENCE=1(stomach)	0.674	NA	5.4593476
1106	6	131184914	131184914	C	T	intronic	EPB41L2	NA	NA	NA	intronic	ENSG00000079819	NA	NA	NA	NA	NA	6q23.1	NA	Name=HNF4A_(H-171),FOXA1_(C-20),JunD,FOSL2,HDAC2_(SC-6296),SP1,TCF4,HNF4A,HNF4G_(SC-6558),ELF1_(SC-631),FOXA1_(SC-101058),FOXA2_(SC-6554),HEY1,RXRA,CEBPB,p300,BHLHE40,TCF12	Name=5	NA	rs915171	0.26	0.26	0.268	0.285743	0.2654	0.1498	0.2723	0.385	0.3221	0.27	0.17	0.27	0.36	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.927365	NA	NA	0.275927	0.370665	NA	0.319	NA	5.458673
1106	11	7022717	7022717	T	C	exonic	ZNF214	NA	nonsynonymous SNV	ZNF214:NM_013249:exon3:c.A197G:p.Y66C	exonic	ENSG00000149050	NA	nonsynonymous SNV	ENSG00000149050:ENST00000278314:exon3:c.A197G:p.Y66C,ENSG00000149050:ENST00000536068:exon4:c.A197G:p.Y66C	NA	NA	11p15.4	NA	NA	NA	NA	rs1156526	0.59	0.59	0.584	0.592652	0.6223	0.7073	0.6354	0.416	0.6524	0.62	0.68	0.61	0.41	0.6323	0.68	0.37	T	0.0	B	0.0	B	0.219	N	1.000	P	0	N	3.49	T	-1.052	T	0.000	T	0.149	-2.54	0.003	-0.007	-0.081	-0.816	0.893	-2.540209	NA	0.52	0.620256	0.412994	NA	0.507	NA	5.4584774
1106	11	64981837	64981837	C	T	exonic	SLC22A20	NA	nonsynonymous SNV	SLC22A20:NM_001004326:exon2:c.C422T:p.A141V	ncRNA_exonic	ENSG00000197847	NA	NA	NA	Score=409;Name=lod=61	NA	11q13.1	NA	NA	NA	NA	rs12420456	0.3	0.3	0.3	0.287141	0.3628	0.2599	0.4611	0.1377	0.316	0.36	0.26	0.41	0.19	0.3377	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.943792	NA	0.01	0.341245	0.183852	ID=COSM429600,COSM429601;OCCURENCE=1(breast)	0.341	NA	5.458255
1106	13	111992247	111992247	C	A	exonic	TEX29	NA	synonymous SNV	TEX29:NM_152324:exon4:c.C207A:p.I69I	exonic	ENSG00000153495	NA	synonymous SNV	ENSG00000153495:ENST00000283547:exon4:c.C207A:p.I69I	NA	NA	13q34	NA	NA	NA	NA	rs35344026	0.06	0.06	0.06	0.0561102	0.0646	0.0575	0.0706	0.0265	0.0757	0.06	0.05	0.06	0.05	0.0653	0.079	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.43525	NA	NA	0.079186	0.035179	NA	0.036	NA	5.4575806
1106	12	52711549	52711549	G	A	exonic	KRT83	NA	synonymous SNV	KRT83:NM_002282:exon4:c.C666T:p.C222C	exonic	ENSG00000170523	NA	synonymous SNV	ENSG00000170523:ENST00000293670:exon4:c.C666T:p.C222C	Score=532;Name=lod=194	NA	12q13.13	NA	NA	NA	NA	rs2857667	0.36	0.36	0.367	0.376198	0.4095	0.1885	0.317	0.5008	0.409	0.41	0.19	0.33	0.51	0.3833	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.83932	NA	NA	0.416512	0.490695	ID=COSM147526;OCCURENCE=1(stomach)	0.428	NA	5.4573546
1106	3	191087551	191087551	G	A	intronic	CCDC50	NA	NA	NA	intronic	ENSG00000152492	NA	NA	NA	NA	NA	3q28	NA	Name=p300,CEBPB	Name=58	NA	rs697905	0.73	0.73	0.743	0.754193	0.5427	0.9117	0.6945	0.8585	0.7106	0.55	0.91	0.67	0.85	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.643791	NA	NA	NA	NA	NA	0.609	NA	5.4573
1106	16	3071420	3071420	T	A	intronic	TNFRSF12A	NA	NA	NA	intronic	ENSG00000006327	NA	NA	NA	NA	NA	16p13.3	NA	Name=Pol2,TAF1,BAF155,Pol2-4H8,Ini1,IRF1,HEY1	Name=144	NA	rs2232798	0.48	0.48	0.488	0.495008	0.5427	0.3046	0.5288	0.5779	0.5061	0.53	0.31	0.54	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.552998	1.552998	NA	NA	NA	NA	0.623	NA	5.4573
1106	20	54941124	54941124	T	C	intronic	FAM210B	NA	NA	NA	intronic	ENSG00000124098	NA	NA	NA	Score=363;Name=lod=40	NA	20q13.2	NA	Name=CTCF	NA	NA	rs6099114	0.21	0.21	0.194	0.229832	0.1938	0.001	0.1499	0.5514	0.1247	0.18	NA	0.17	0.54	0.1811	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.656811	NA	NA	0.168023	0.485247	NA	0.239	NA	5.457077
1106	1	212619339	212619339	T	C	exonic	NENF	NA	synonymous SNV	NENF:NM_013349:exon4:c.T510C:p.D170D	exonic	ENSG00000117691	NA	synonymous SNV	ENSG00000117691:ENST00000366988:exon4:c.T510C:p.D170D	Score=605;Name=lod=383	NA	1q32.3	NA	NA	NA	NA	rs4804	0.49	0.49	0.467	0.479233	0.3807	0.6746	0.5605	0.4939	0.3016	0.38	0.66	0.51	0.46	0.4287	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.837979	NA	NA	0.401047	0.493418	NA	0.442	NA	5.4562196
1106	18	60241699	60241699	T	C	exonic	ZCCHC2	NA	synonymous SNV	ZCCHC2:NM_017742:exon13:c.T2385C:p.I795I	exonic	ENSG00000141664	NA	synonymous SNV	ENSG00000141664:ENST00000586834:exon12:c.T1422C:p.I474I,ENSG00000141664:ENST00000269499:exon13:c.T2385C:p.I795I	NA	NA	18q21.33	NA	NA	NA	NA	rs34413962	0.04	0.04	0.028	0.0409345	0.0746	0.002	0.0648	0.0212	0.0562	0.06	NA	0.07	0.01	0.0641	0.072	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.418862	NA	NA	0.071839	0.027833	NA	0.043	NA	5.4561276
1106	8	27277537	27277537	G	A	exonic	PTK2B	NA	synonymous SNV	PTK2B:NM_173175:exon3:c.G330A:p.T110T,PTK2B:NM_173176:exon3:c.G330A:p.T110T,PTK2B:NM_004103:exon4:c.G330A:p.T110T,PTK2B:NM_173174:exon8:c.G330A:p.T110T	exonic	ENSG00000120899	NA	synonymous SNV	ENSG00000120899:ENST00000517339:exon2:c.G330A:p.T110T,ENSG00000120899:ENST00000346049:exon3:c.G330A:p.T110T,ENSG00000120899:ENST00000412793:exon3:c.G330A:p.T110T,ENSG00000120899:ENST00000420218:exon3:c.G330A:p.T110T,ENSG00000120899:ENST00000522517:exon3:c.G330A:p.T110T,ENSG00000120899:ENST00000544172:exon7:c.G330A:p.T110T,ENSG00000120899:ENST00000338238:exon8:c.G330A:p.T110T,ENSG00000120899:ENST00000397501:exon8:c.G330A:p.T110T	NA	NA	8p21.2	Score=799;Name=V$CDPCR3_01	NA	NA	NA	rs1030526	0.34	0.34	0.333	0.386581	0.4076	0.2718	0.2738	0.4228	0.5143	0.41	0.23	0.31	0.4	0.3983	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.088525	NA	NA	0.405116	0.42374	NA	0.486	NA	5.4556506
1106	1	118530796	118530796	C	T	exonic	SPAG17	NA	synonymous SNV	SPAG17:NM_206996:exon39:c.G5553A:p.Q1851Q	exonic	ENSG00000155761	NA	synonymous SNV	ENSG00000155761:ENST00000437255:exon9:c.G993A:p.Q331Q,ENSG00000155761:ENST00000336338:exon39:c.G5553A:p.Q1851Q	NA	NA	1p12	NA	NA	NA	NA	rs12040811	0.12	0.12	0.111	0.138379	0.0626	0.3403	0.0461	0.0522	0.1902	0.06	0.3	0.05	0.04	0.0909	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.218682	NA	NA	0.057674	0.049024	NA	0.072	NA	5.4554926
1106	6	42924247	42924247	G	A	intergenic	CNPY3,GNMT	dist=17239;dist=4253	NA	NA	ncRNA_exonic	ENSG00000181524	NA	NA	NA	Score=720;Name=lod=1123	NA	6p21.1	NA	Name=SP1	NA	NA	rs13216214	0.48	0.48	0.492	0.494409	0.5447	0.1706	0.428	0.7632	0.4601	0.55	0.19	0.43	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.486112	2.486112	NA	NA	NA	NA	0.587	NA	5.4553
1106	6	42924424	42924424	G	T	intergenic	CNPY3,GNMT	dist=17416;dist=4076	NA	NA	ncRNA_exonic	ENSG00000181524	NA	NA	NA	Score=720;Name=lod=1123	NA	6p21.1	NA	Name=SP1,CTCF_(SC-5916),ZBTB33	NA	NA	rs4714640	0.48	0.48	0.44	0.496206	0.5447	0.1696	0.428	0.77	0.4611	0.55	0.19	0.43	0.77	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.5263	1.5263	NA	NA	NA	NA	0.58	NA	5.4553
1106	2	198365788	198365788	C	T	intronic	HSPE1,HSPE1-MOB4	NA	NA	NA	intronic	ENSG00000115541,ENSG00000144381,ENSG00000270757	NA	NA	NA	NA	NA	2q33.1	NA	Name=CTCF	Name=52	NA	rs2305560	0.16	0.16	0.161	0.130192	0.1978	0.2143	0.1686	0.0378	0.0716	0.19	0.23	0.18	0.03	0.162	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.893651	NA	NA	0.185	0.06877	NA	0.072	NA	5.4552
1107	20	61143951	61143951	G	C	ncRNA_exonic	C20orf166-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000174403	NA	NA	NA	NA	NA	20q13.33	NA	Name=ZNF263	NA	NA	rs45612436	0.12	0.12	0.092	0.106829	0.2117	0.0317	0.1427	0.0386	0.1431	0.21	0.03	0.15	0.04	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.607058	NA	NA	NA	NA	NA	0.109	NA	5.4549666
1107	5	169763	169763	A	G	intronic	PLEKHG4B	NA	NA	NA	intronic	ENSG00000153404	NA	NA	NA	NA	NA	5p15.33	NA	Name=USF-1	Name=81	NA	rs1108868	0.44	0.44	0.425	0.465455	0.5457	0.2798	0.4481	0.475	0.5736	0.54	0.28	0.46	0.46	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.073213	NA	NA	NA	NA	NA	0.551	NA	5.4543
1107	5	157117586	157117586	C	A	intergenic	C5orf52,THG1L	dist=10424;dist=40737	NA	NA	upstream	ENSG00000253798	NA	NA	NA	NA	NA	5q33.3	NA	Name=CTCF,TCF12,CTCF_(C-20),CTCF_(SC-5916)	Name=6	NA	rs35001216	0.03	0.03	0.041	0.038139	0.0457	NA	0.036	0.0227	0.092	0.04	NA	0.03	0.04	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.072258	NA	NA	NA	NA	NA	0.007	NA	5.4543
1107	11	51426461	51426461	G	A	intergenic	OR4A5,OR4C46	dist=14013;dist=88821	NA	NA	ncRNA_exonic	ENSG00000255349	NA	NA	NA	Score=482;Name=lod=121	NA	11p11.12	Score=921;Name=V$TAL1BETAITF2_01	NA	NA	NA	rs561121	0.46	0.46	0.46	0.431709	0.5457	0.5407	0.5821	0.2027	0.4049	0.55	0.53	0.58	0.16	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.943766	NA	NA	NA	NA	NA	0.355	NA	5.4543
1107	14	65216120	65216120	C	T	exonic	SPTB	NA	synonymous SNV	SPTB:NM_001024858:exon35:c.G6891A:p.A2297A	exonic	ENSG00000070182	NA	synonymous SNV	ENSG00000070182:ENST00000553938:exon18:c.G2991A:p.A997A,ENSG00000070182:ENST00000389722:exon35:c.G6891A:p.A2297A,ENSG00000070182:ENST00000556626:exon36:c.G6891A:p.A2297A	NA	NA	14q23.3	NA	NA	NA	NA	rs57421986	0.1	0.1	0.104	0.104433	0.0775	0.0317	0.0346	0.2421	0.0706	0.08	0.03	0.04	0.25	0.0757	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.750634	NA	NA	0.059186	0.222197	NA	0.094	NA	5.4542806
1107	13	25356053	25356053	T	C	exonic	RNF17	NA	synonymous SNV	RNF17:NM_001184993:exon6:c.T582C:p.F194F,RNF17:NM_031277:exon6:c.T582C:p.F194F	exonic	ENSG00000132972	NA	synonymous SNV	ENSG00000132972:ENST00000255324:exon6:c.T582C:p.F194F,ENSG00000132972:ENST00000255325:exon6:c.T582C:p.F194F,ENSG00000132972:ENST00000381921:exon6:c.T582C:p.F194F	Score=456;Name=lod=95	NA	13q12.12	NA	NA	NA	NA	rs9707144	0.45	0.45	0.458	0.437899	0.3748	0.4315	0.4712	0.4871	0.4192	0.39	0.49	0.45	0.48	0.4328	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.976335	NA	NA	0.405	0.47458	NA	0.391	NA	5.4540666
1107	15	28235773	28235773	C	T	exonic	OCA2	NA	synonymous SNV	OCA2:NM_000275:exon10:c.G1065A:p.A355A	exonic	ENSG00000104044	NA	synonymous SNV	ENSG00000104044:ENST00000354638:exon10:c.G1065A:p.A355A,ENSG00000104044:ENST00000382996:exon10:c.G1065A:p.A355A	Score=464;Name=lod=103	NA	15q13.1	Score=904;Name=V$YY1_01	NA	NA	NA	rs1800404	0.51	0.51	0.459	0.410743	0.7863	0.3859	0.5793	0.1271	0.3139	0.79	0.42	0.62	0.12	0.6367	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.148447	NA	NA	0.789767	0.226282	NA	0.507	NA	5.4538996
1107	10	115341753	115341753	G	A	exonic	HABP2	NA	synonymous SNV	HABP2:NM_001177660:exon9:c.G879A:p.K293K,HABP2:NM_004132:exon9:c.G957A:p.K319K	exonic	ENSG00000148702	NA	synonymous SNV	ENSG00000148702:ENST00000351270:exon9:c.G957A:p.K319K,ENSG00000148702:ENST00000542051:exon9:c.G879A:p.K293K	Score=383;Name=lod=48	NA	10q25.3	NA	NA	NA	NA	rs2245056	0.39	0.39	0.347	0.376997	0.3917	0.2996	0.4914	0.416	0.3078	0.39	0.33	0.45	0.41	0.4004	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.200743	NA	NA	0.420698	0.416024	NA	0.304	NA	5.4538686
1107	18	44561630	44561630	C	T	exonic	TCEB3B	NA	synonymous SNV	TCEB3B:NM_016427:exon1:c.G6A:p.A2A	exonic	ENSG00000206181	NA	synonymous SNV	ENSG00000206181:ENST00000332567:exon1:c.G6A:p.A2A	NA	NA	18q21.1	NA	NA	NA	NA	rs61746775	0.06	0.06	0.063	0.0379393	0.0835	0.0069	0.0418	0.0499	0.0041	0.09	0.01	0.05	0.07	0.0575	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.014099	NA	NA	0.072027	0.059518	NA	0.138	NA	5.4536396
1107	3	97916231	97916231	A	G	intergenic	OR5H15,OR5H6	dist=27746;dist=66898	NA	NA	ncRNA_exonic	ENSG00000249321	NA	NA	NA	Score=399;Name=lod=56	NA	3q11.2	Score=938;Name=V$NKX3A_01	NA	NA	NA	rs6765411	0.59	0.59	0.595	0.591853	0.5467	0.494	0.5029	0.7731	0.5573	0.55	0.56	0.48	0.77	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.134569	NA	NA	NA	NA	NA	0.486	NA	5.4533
1107	12	4835882	4835882	T	G	exonic	GALNT8	NA	synonymous SNV	GALNT8:NM_017417:exon2:c.T396G:p.L132L	exonic	ENSG00000130035	NA	synonymous SNV	ENSG00000130035:ENST00000252318:exon2:c.T396G:p.L132L	Score=259;Name=lod=15	NA	12p13.32	NA	NA	NA	NA	rs2286578	0.35	0.35	0.327	0.313099	0.4274	0.3601	0.4179	0.1838	0.2474	0.42	0.39	0.41	0.17	0.371	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.868989	NA	NA	0.415233	0.238084	NA	0.326	NA	5.4530336
1107	5	176002542	176002542	C	T	exonic	CDHR2	NA	synonymous SNV	CDHR2:NM_001171976:exon10:c.C804T:p.G268G,CDHR2:NM_017675:exon10:c.C804T:p.G268G	exonic	ENSG00000074276	NA	synonymous SNV	ENSG00000074276:ENST00000506348:exon9:c.C804T:p.G268G,ENSG00000074276:ENST00000261944:exon10:c.C804T:p.G268G,ENSG00000074276:ENST00000510636:exon10:c.C804T:p.G268G	NA	NA	5q35.2	NA	NA	NA	NA	rs41275281	0.11	0.11	0.124	0.121006	0.0706	0.1597	0.085	0.118	0.1626	0.07	0.16	0.07	0.17	0.087	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.305568	NA	NA	0.056163	0.106673	ID=COSM449360;OCCURENCE=1(breast)	0.203	NA	5.4529036
1107	16	1250559	1250559	T	C	exonic	CACNA1H	NA	synonymous SNV	CACNA1H:NM_001005407:exon7:c.T1107C:p.I369I,CACNA1H:NM_021098:exon7:c.T1107C:p.I369I	exonic	ENSG00000196557	NA	synonymous SNV	ENSG00000196557:ENST00000565831:exon6:c.T1107C:p.I369I,ENSG00000196557:ENST00000348261:exon7:c.T1107C:p.I369I,ENSG00000196557:ENST00000358590:exon7:c.T1107C:p.I369I	NA	NA	16p13.3	Score=872;Name=V$YY1_01	NA	NA	NA	rs8044363	0.34	0.34	0.311	0.332668	0.4095	0.1022	0.3026	0.4902	0.2996	0.42	0.09	0.3	0.54	0.3774	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.025006	NA	NA	0.426919	0.46087	NA	0.449	NA	5.4528476
1107	7	100016844	100016844	C	G	intronic	ZCWPW1	NA	NA	NA	intronic	ENSG00000078487	NA	NA	NA	NA	NA	7q22.1	NA	Name=CTCF	Name=14	NA	rs11763414	0.12	0.12	0.112	0.116014	0.1928	0.0278	0.1153	0.1293	0.1104	0.19	0.02	0.12	0.11	0.1578	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.657794	NA	NA	0.196741	0.14726	NA	0.188	NA	5.452659
1107	17	37009072	37009072	C	T	intronic	RPL23	NA	NA	NA	intronic	ENSG00000125691	NA	NA	NA	NA	NA	17q12	NA	Name=HEY1,Pol2	Name=47	NA	rs1239179	0.09	0.09	0.066	0.0710863	0.1889	0.003	0.1037	0.0113	0.0777	0.18	NA	0.11	0.02	0.1479	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.173482	NA	NA	0.210698	0.0371	NA	0.072	NA	5.452502
1107	3	12300058	12300058	G	A	intergenic	SYN2,PPARG	dist=66526;dist=29291	NA	NA	upstream	ENSG00000236062	NA	NA	NA	Score=259;Name=lod=15	NA	3p25.2	NA	Name=CHD2_(N-1250),ZBTB33	NA	NA	rs71304098	0.03	0.03	0.033	0.0389377	0.0477	0.0228	0.0159	0.025	0.0818	0.05	0.03	0.03	0.02	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.414324	NA	NA	NA	NA	NA	0.036	NA	5.4523
1107	5	95152313	95152313	A	G	exonic	GLRX	NA	synonymous SNV	GLRX:NM_001118890:exon2:c.T225C:p.I75I,GLRX:NM_001243658:exon2:c.T225C:p.I75I,GLRX:NM_001243659:exon2:c.T225C:p.I75I,GLRX:NM_002064:exon2:c.T225C:p.I75I	exonic	ENSG00000173221	NA	synonymous SNV	ENSG00000173221:ENST00000237858:exon2:c.T225C:p.I75I,ENSG00000173221:ENST00000379979:exon2:c.T225C:p.I75I,ENSG00000173221:ENST00000505427:exon2:c.T225C:p.I75I,ENSG00000173221:ENST00000508780:exon2:c.T225C:p.I75I,ENSG00000173221:ENST00000512469:exon2:c.T225C:p.I75I	NA	NA	5q15	NA	Name=MafK_(SC-477),MafF_(M8194)	NA	NA	rs4561	0.31	0.31	0.307	0.301318	0.4135	0.1716	0.2752	0.3169	0.317	0.42	0.16	0.33	0.3	0.371	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.206353	NA	NA	0.429884	0.333409	NA	0.341	NA	5.4522826
1107	7	155301781	155301781	A	G	UTR5	CNPY1	NM_001103176:c.-49T>C	NA	NA	UTR5	ENSG00000146910	ENST00000406197:c.-49T>C,ENST00000321736:c.-49T>C	NA	NA	Score=410;Name=lod=62	NA	7q36.3	NA	NA	Name=3	NA	rs6947243	0.28	0.28	0.252	0.263578	0.2873	0.3502	0.2406	0.1891	0.2669	0.29	0.32	0.23	0.23	0.2946	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.839747	1.839747	NA	0.299483	0.217321	NA	0.275	NA	5.4519504
1107	3	12299983	12299983	G	A	intergenic	SYN2,PPARG	dist=66451;dist=29366	NA	NA	upstream	ENSG00000236062	NA	NA	NA	Score=467;Name=lod=105	NA	3p25.2	NA	Name=CHD2_(N-1250),ZBTB33	NA	NA	rs34685612	0.03	0.03	0.032	0.0391374	0.0487	0.0228	0.0159	0.025	0.0818	0.05	0.03	0.03	0.02	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.365932	NA	NA	NA	NA	NA	0.036	NA	5.4513
1107	17	46024254	46024254	A	T	UTR3	PNPO	NM_018129:c.*106A>T	NA	NA	ncRNA_UTR3	ENSG00000108439	NA	NA	NA	NA	NA	17q21.32	NA	Name=CTCF	NA	NA	rs117508783	0.02	0.02	0.018	0.0291534	0.0487	0.001	0.0317	0.0053	0.0685	0.04	NA	0.03	0.0041	NA	0.065	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.23262	NA	NA	NA	NA	NA	0.043	NA	5.4513
1107	21	34804966	34804966	T	C	intronic	IFNGR2	NA	NA	NA	UTR3	ENSG00000142188	ENST00000420455:c.*2264A>G	NA	NA	NA	NA	21q22.11	NA	Name=MEF2A,SP1,NFKB	Name=3	NA	rs1532	0.84	0.84	0.817	0.84345	0.7157	0.9851	0.8285	0.8752	0.7965	0.72	0.99	0.83	0.86	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.026193	NA	NA	NA	NA	NA	0.768	NA	5.4509667
1107	2	132258593	132258593	A	G	ncRNA_exonic	LOC150776	NA	NA	NA	ncRNA_exonic	ENSG00000152117	NA	NA	NA	Score=576;Name=lod=292	NA	2q21.1	NA	NA	NA	NA	rs13415770	0.3	0.3	0.28	0.30012	0.2157	0.6796	0.4092	0.0189	0.2986	0.2	0.63	0.34	0.03	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.723605	2.723605	0.06	NA	NA	NA	0.101	NA	5.4509666
1107	2	132277465	132277465	G	A	ncRNA_intronic	LOC150776,RNU6-81P	NA	NA	NA	ncRNA_exonic	ENSG00000152117	NA	NA	NA	Score=599;Name=lod=362	NA	2q21.1	NA	NA	NA	NA	rs9287519	0.31	0.31	0.265	0.298522	0.2157	0.6796	0.4063	0.0144	0.2986	0.2	0.66	0.34	0.03	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.176484	NA	NA	NA	NA	NA	0.254	NA	5.4509666
1107	2	132294248	132294248	C	T	ncRNA_intronic	RNU6-81P	NA	NA	NA	ncRNA_exonic	ENSG00000224679	NA	NA	NA	Score=632;Name=lod=495	NA	2q21.1	NA	NA	NA	NA	rs13395008	0.3	0.3	0.265	0.301318	0.2157	0.6766	0.4063	0.0333	0.2904	0.2	0.65	0.35	0.04	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.41653	NA	NA	NA	NA	NA	0.159	NA	5.4509666
1107	8	37728019	37728019	T	G	exonic	RAB11FIP1	NA	synonymous SNV	RAB11FIP1:NM_025151:exon4:c.A1650C:p.A550A,RAB11FIP1:NM_001002814:exon5:c.A3552C:p.A1184A	exonic	ENSG00000156675	NA	synonymous SNV	ENSG00000156675:ENST00000524118:exon3:c.A1206C:p.A402A,ENSG00000156675:ENST00000287263:exon4:c.A1650C:p.A550A,ENSG00000156675:ENST00000522727:exon4:c.A1206C:p.A402A,ENSG00000156675:ENST00000330843:exon5:c.A3552C:p.A1184A	Score=486;Name=lod=126	NA	8p11.23	NA	Name=c-Jun,GR	NA	NA	rs7820872	0.83	0.83	0.805	0.800719	0.7416	0.9752	0.7738	0.8071	0.6922	0.76	0.98	0.74	0.82	0.7553	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.93872	NA	NA	0.718953	0.765774	NA	NA	NA	5.4508136
1107	9	20862515	20862515	A	C	intronic	FOCAD	NA	NA	NA	intronic	ENSG00000188352	NA	NA	NA	NA	NA	9p21.3	NA	Name=FOXA1_(C-20)	Name=3	NA	rs4977780	0.58	0.58	0.565	0.543131	0.5497	0.6696	0.6066	0.4788	0.4479	0.57	0.68	0.59	0.45	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.237987	NA	NA	NA	NA	NA	0.5	NA	5.4503
1107	2	220072852	220072852	C	T	intronic	ZFAND2B	NA	NA	NA	UTR3	ENSG00000158552	ENST00000409319:c.*88C>T	NA	NA	NA	NA	2q35	NA	Name=ELF1_(SC-631)	Name=105	NA	rs4674367	0.45	0.45	0.433	0.394369	0.7167	0.253	0.4294	0.2337	0.4008	0.73	0.28	0.46	0.23	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.078649	NA	NA	NA	NA	NA	0.442	NA	5.4499667
1107	11	40137543	40137543	T	C	exonic	LRRC4C	NA	synonymous SNV	LRRC4C:NM_020929:exon5:c.A300G:p.R100R,LRRC4C:NM_001258419:exon7:c.A300G:p.R100R	exonic	ENSG00000148948	NA	synonymous SNV	ENSG00000148948:ENST00000278198:exon2:c.A300G:p.R100R,ENSG00000148948:ENST00000527150:exon3:c.A300G:p.R100R,ENSG00000148948:ENST00000530763:exon5:c.A300G:p.R100R,ENSG00000148948:ENST00000528697:exon7:c.A300G:p.R100R	Score=664;Name=lod=668	NA	11p12	NA	NA	NA	NA	rs2953310	0.53	0.53	0.546	0.499401	0.3728	0.6052	0.5058	0.7027	0.2413	0.37	0.64	0.48	0.7	0.4299	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.211774	NA	NA	0.414186	0.662052	ID=COSM147178;OCCURENCE=1(stomach)	0.486	NA	5.4497806
1107	3	9944937	9944937	G	T	intronic	IL17RE	NA	NA	NA	intronic	ENSG00000163701	NA	NA	NA	NA	NA	3p25.3	NA	Name=Pol2-4H8,c-Fos	Name=72	NA	rs279588	0.38	0.38	0.362	0.398962	0.5507	0.0972	0.4697	0.4667	0.4121	0.54	0.07	0.47	0.43	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.306279	NA	NA	NA	NA	NA	0.29	NA	5.4493
1107	20	3277602	3277602	C	A	intronic	C20orf194	NA	NA	NA	intronic	ENSG00000088854	NA	NA	NA	Score=672;Name=lod=719	NA	20p13	Score=920;Name=V$SRY_02	NA	NA	NA	rs2236104	0.19	0.19	0.187	0.188698	0.1909	0.1488	0.1772	0.2458	0.1585	0.18	0.17	0.15	0.25	0.1807	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.800622	1.800622	NA	0.180854	0.238612	NA	0.246	NA	5.447546
1107	11	124109490	124109490	A	G	intergenic	OR8G2,OR8G1	dist=13178;dist=10933	NA	NA	ncRNA_exonic	ENSG00000254845	NA	NA	NA	Score=472;Name=lod=111	NA	11q24.2	NA	Name=MafK_(ab50322),USF-1,eGFP-JunD	NA	NA	rs10893182	0.5	0.5	0.452	0.444688	0.5527	0.5833	0.5591	0.3154	0.2843	0.54	0.59	0.54	0.31	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.068591	NA	NA	NA	NA	NA	0.304	NA	5.4473
1107	11	124109508	124109508	G	T	intergenic	OR8G2,OR8G1	dist=13196;dist=10915	NA	NA	ncRNA_exonic	ENSG00000254845	NA	NA	NA	Score=472;Name=lod=111	NA	11q24.2	NA	Name=USF-1,MafK_(ab50322),eGFP-JunD	NA	NA	rs11219519	0.5	0.5	0.469	0.444688	0.5527	0.5833	0.5591	0.3154	0.2843	0.54	0.59	0.54	0.31	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.37463	NA	NA	NA	NA	NA	0.304	NA	5.4473
1107	1	231488524	231488524	C	T	exonic	SPRTN	NA	nonsynonymous SNV	SPRTN:NM_032018:exon5:c.C887T:p.P296L	exonic	ENSG00000010072	NA	nonsynonymous SNV	ENSG00000010072:ENST00000295050:exon5:c.C887T:p.P296L	NA	NA	1q42.2	NA	NA	NA	NA	rs2437150	0.56	0.56	0.515	0.532947	0.6511	0.5248	0.5216	0.4402	0.5532	0.67	0.54	0.56	0.4	0.5988	0.67	1	T	0.0	B	0.0	B	0.514	N	1.000	P	0.895	L	0.99	T	-0.903	T	0.000	T	0.082	0.938	8.824	1.26	0.079	0.137	1.827	0.938228	NA	0.69	0.636395	0.467771	NA	0.42	NA	5.4470384
1107	2	132257830	132257830	C	T	ncRNA_exonic	LOC150776	NA	NA	NA	ncRNA_exonic	ENSG00000152117	NA	NA	NA	Score=550;Name=lod=229	NA	2q21.1	NA	NA	NA	NA	rs13035779	0.34	0.34	0.298	0.334665	0.2197	0.6806	0.4265	0.1346	0.3016	0.21	0.66	0.38	0.13	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.08352	NA	NA	NA	NA	NA	0.29	NA	5.4469666
1107	2	132269230	132269230	G	C	ncRNA_intronic	LOC150776,RNU6-81P	NA	NA	NA	ncRNA_intronic	ENSG00000152117	NA	NA	NA	NA	NA	2q21.1	NA	Name=CTCF	NA	NA	rs4145988	NA	NA	0.249	0.334665	0.2197	0.6815	0.4265	0.1346	0.3006	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.021003	NA	NA	NA	NA	NA	NA	NA	5.4469666
1107	2	132269231	132269231	G	A	ncRNA_intronic	LOC150776,RNU6-81P	NA	NA	NA	ncRNA_intronic	ENSG00000152117	NA	NA	NA	NA	NA	2q21.1	NA	Name=CTCF	NA	NA	rs4145987	0.29	0.29	0.22	0.334665	0.2197	0.6806	0.4265	0.1346	0.3016	0.17	0.58	0.32	0.1	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.789675	NA	NA	NA	NA	NA	NA	NA	5.4469666
1107	17	80788465	80788465	T	C	exonic	ZNF750	NA	synonymous SNV	ZNF750:NM_024702:exon3:c.A1725G:p.A575A	exonic	ENSG00000141579	NA	synonymous SNV	ENSG00000141579:ENST00000269394:exon3:c.A1725G:p.A575A,ENSG00000141579:ENST00000572562:exon3:c.A528G:p.A176A	NA	NA	17q25.3	NA	NA	Name=33	NA	rs12938126	0.4	0.4	0.337	0.369209	0.4195	0.3522	0.3343	0.4017	0.316	0.42	0.37	0.37	0.43	0.3896	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.46572	NA	NA	0.410698	0.400363	NA	0.348	NA	5.4468686
1107	9	139686289	139686289	A	G	intronic	TMEM141	NA	NA	NA	intronic	ENSG00000244187	NA	NA	NA	NA	NA	9q34.3	NA	Name=Rad21,CTCF,Znf143_(16618-1-AP),YY1_(C-20),TAF7_(SQ-8),Pol2,SP1,SMC3_(ab9263),CTCF_(C-20),c-Myc,ZEB1_(SC-25388),USF-1,TCF12,CTCF_(SC-5916)	Name=71	NA	rs2811788	0.29	0.29	0.266	0.325479	0.2714	0.1498	0.2853	0.4955	0.3609	0.28	0.12	0.29	0.51	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.192524	2.192524	NA	0.282212	0.443642	NA	0.348	NA	5.446388
1107	14	107083151	107083151	C	G	intergenic	LINC00221,NONE	dist=131622;dist=NONE	NA	NA	intronic	ENSG00000224373	NA	NA	NA	NA	NA	14q32.33	NA	Name=CTCF_(C-20),TCF12,CTCF_(SC-5916),ZNF263,Rad21,CTCF,CTCFL_(SC-98982),Znf143_(16618-1-AP)	Name=31	NA	rs11623507	0.25	0.25	0.179	0.316094	0.2207	0.3323	0.2738	0.2148	0.5644	0.22	0.34	0.26	0.18	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.685976	NA	NA	NA	NA	NA	0.101	NA	5.4459667
1107	17	80788492	80788492	A	G	exonic	ZNF750	NA	synonymous SNV	ZNF750:NM_024702:exon3:c.T1698C:p.P566P	exonic	ENSG00000141579	NA	synonymous SNV	ENSG00000141579:ENST00000269394:exon3:c.T1698C:p.P566P,ENSG00000141579:ENST00000572562:exon3:c.T501C:p.P167P	NA	NA	17q25.3	NA	NA	Name=33	NA	rs12948179	0.4	0.4	0.364	0.36901	0.4205	0.3512	0.3343	0.4009	0.316	0.42	0.37	0.37	0.42	0.3898	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.303382	NA	NA	0.411047	0.402633	NA	0.406	NA	5.4453196
1107	3	12791172	12791172	T	C	intronic	TMEM40	NA	NA	NA	intronic	ENSG00000088726	NA	NA	NA	NA	NA	3p25.2	NA	Name=PU.1,Pol2,POU2F2,Oct-2	Name=9	NA	rs937915	0.56	0.56	0.603	0.537141	0.5547	0.2331	0.5533	0.9342	0.2843	0.55	0.25	0.55	0.94	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.756801	NA	NA	NA	NA	NA	0.681	NA	5.4453
1108	8	22084503	22084503	C	T	exonic	PHYHIP	NA	synonymous SNV	PHYHIP:NM_014759:exon3:c.G201A:p.P67P,PHYHIP:NM_001099335:exon4:c.G201A:p.P67P	exonic	ENSG00000168490	NA	synonymous SNV	ENSG00000168490:ENST00000523252:exon2:c.G57A:p.P19P,ENSG00000168490:ENST00000454243:exon3:c.G201A:p.P67P,ENSG00000168490:ENST00000321613:exon4:c.G201A:p.P67P	NA	NA	8p21.3	Score=770;Name=V$PAX2_01	NA	NA	NA	rs11547656	0.31	0.31	0.315	0.322484	0.4304	0.2044	0.3401	0.2398	0.4325	0.41	0.22	0.36	0.23	0.3789	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.331494	1.331494	NA	0.412635	0.252879	NA	0.384	NA	5.4447316
1108	7	88964510	88964510	T	C	exonic	ZNF804B	NA	synonymous SNV	ZNF804B:NM_181646:exon4:c.T2214C:p.N738N	exonic	ENSG00000182348	NA	synonymous SNV	ENSG00000182348:ENST00000333190:exon4:c.T2214C:p.N738N	NA	NA	7q21.13	NA	NA	NA	NA	rs62469518	0.04	0.04	0.037	0.0341454	0.0785	NA	0.0605	0.0113	0.0358	0.07	NA	0.06	0.01	0.0592	0.085	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.999897	NA	NA	0.084884	0.020427	NA	NA	NA	5.4440826
1108	19	50562459	50562459	T	G	ncRNA_intronic	FLJ26850	NA	NA	NA	ncRNA_exonic	ENSG00000269540	NA	NA	NA	NA	NA	19q13.33	NA	Name=SETDB1,KAP1	NA	NA	rs11879764	0.46	0.46	0.466	0.482029	0.2227	0.744	0.4092	0.5378	0.455	0.22	0.76	0.39	0.56	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.847334	NA	0.51	NA	NA	NA	0.457	NA	5.4439666
1108	21	44180443	44180443	C	T	exonic	PDE9A	NA	synonymous SNV	PDE9A:NM_001001580:exon6:c.C252T:p.C84C,PDE9A:NM_001001575:exon7:c.C423T:p.C141C,PDE9A:NM_001001576:exon7:c.C252T:p.C84C,PDE9A:NM_001001569:exon8:c.C519T:p.C173C,PDE9A:NM_001001572:exon8:c.C282T:p.C94C,PDE9A:NM_001001577:exon8:c.C501T:p.C167C,PDE9A:NM_001001568:exon9:c.C522T:p.C174C,PDE9A:NM_001001573:exon9:c.C282T:p.C94C,PDE9A:NM_001001578:exon9:c.C597T:p.C199C,PDE9A:NM_001001579:exon9:c.C282T:p.C94C,PDE9A:NM_001001571:exon10:c.C600T:p.C200C,PDE9A:NM_001001574:exon10:c.C645T:p.C215C,PDE9A:NM_001001581:exon10:c.C702T:p.C234C,PDE9A:NM_001001584:exon10:c.C282T:p.C94C,PDE9A:NM_001001585:exon10:c.C282T:p.C94C,PDE9A:NM_001001567:exon11:c.C723T:p.C241C,PDE9A:NM_001001570:exon11:c.C744T:p.C248C,PDE9A:NM_001001582:exon11:c.C780T:p.C260C,PDE9A:NM_001001583:exon11:c.C825T:p.C275C,PDE9A:NM_002606:exon12:c.C903T:p.C301C	exonic	ENSG00000160191	NA	synonymous SNV	ENSG00000160191:ENST00000398227:exon7:c.C423T:p.C141C,ENSG00000160191:ENST00000349112:exon8:c.C519T:p.C173C,ENSG00000160191:ENST00000398229:exon8:c.C501T:p.C167C,ENSG00000160191:ENST00000335440:exon9:c.C597T:p.C199C,ENSG00000160191:ENST00000398224:exon9:c.C522T:p.C174C,ENSG00000160191:ENST00000539837:exon9:c.C519T:p.C173C,ENSG00000160191:ENST00000398232:exon10:c.C702T:p.C234C,ENSG00000160191:ENST00000398234:exon10:c.C600T:p.C200C,ENSG00000160191:ENST00000398236:exon10:c.C645T:p.C215C,ENSG00000160191:ENST00000328862:exon11:c.C825T:p.C275C,ENSG00000160191:ENST00000335512:exon11:c.C723T:p.C241C,ENSG00000160191:ENST00000380328:exon11:c.C744T:p.C248C,ENSG00000160191:ENST00000398225:exon11:c.C780T:p.C260C,ENSG00000160191:ENST00000291539:exon12:c.C903T:p.C301C	Score=422;Name=lod=69	NA	21q22.3	NA	NA	NA	NA	rs13047953	0.32	0.32	0.285	0.228834	0.4374	0.4127	0.219	0.0219	0.1115	0.47	0.41	0.24	0.04	0.3509	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.16269	NA	NA	0.434884	0.083749	ID=COSM149237;OCCURENCE=1(stomach)	0.225	NA	5.4434826
1108	10	11299735	11299735	A	T	exonic	CELF2	NA	synonymous SNV	CELF2:NM_001025076:exon5:c.A345T:p.V115V,CELF2:NM_001025077:exon5:c.A417T:p.V139V,CELF2:NM_001083591:exon5:c.A345T:p.V115V,CELF2:NM_006561:exon5:c.A438T:p.V146V	exonic	ENSG00000048740	NA	synonymous SNV	ENSG00000048740:ENST00000537122:exon3:c.A84T:p.V28V,ENSG00000048740:ENST00000354897:exon4:c.A345T:p.V115V,ENSG00000048740:ENST00000315874:exon5:c.A345T:p.V115V,ENSG00000048740:ENST00000354440:exon5:c.A345T:p.V115V,ENSG00000048740:ENST00000379261:exon5:c.A417T:p.V139V,ENSG00000048740:ENST00000399850:exon5:c.A345T:p.V115V,ENSG00000048740:ENST00000416382:exon5:c.A417T:p.V139V,ENSG00000048740:ENST00000417956:exon5:c.A345T:p.V115V,ENSG00000048740:ENST00000427450:exon5:c.A345T:p.V115V,ENSG00000048740:ENST00000450189:exon5:c.A438T:p.V146V,ENSG00000048740:ENST00000542579:exon5:c.A438T:p.V146V	Score=675;Name=lod=736	NA	10p14	NA	NA	Name=5	NA	rs2277212	0.75	0.75	0.756	0.78115	0.7247	0.8611	0.7493	0.7352	0.8415	0.74	0.85	0.71	0.68	0.7576	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.331091	1.331091	NA	0.741035	0.742828	ID=COSM1345795,COSM1345794;OCCURENCE=1(large_intestine)	0.667	NA	5.4433316
1108	5	169267784	169267784	G	A	exonic	DOCK2	NA	synonymous SNV	DOCK2:NM_004946:exon27:c.G2727A:p.Q909Q	exonic	ENSG00000134516	NA	synonymous SNV	ENSG00000134516:ENST00000519628:exon4:c.G339A:p.Q113Q,ENSG00000134516:ENST00000520908:exon13:c.G1203A:p.Q401Q,ENSG00000134516:ENST00000256935:exon27:c.G2727A:p.Q909Q,ENSG00000134516:ENST00000524185:exon27:c.G2727A:p.Q909Q	Score=517;Name=lod=169	NA	5q35.1	NA	NA	NA	NA	rs261623	0.41	0.41	0.416	0.395367	0.4155	0.1577	0.389	0.6415	0.2914	0.44	0.15	0.39	0.68	0.3967	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.045068	NA	NA	0.41186	0.603268	NA	0.471	NA	5.4426066
1108	2	9637403	9637403	A	G	intronic	ADAM17	NA	NA	NA	intronic	ENSG00000151694	NA	NA	NA	NA	NA	2p25.1	NA	Name=STAT3	Name=19	NA	rs41264175	0.11	0.11	0.102	0.100639	0.1889	0.0188	0.1326	0.0817	0.0971	0.18	0.01	0.15	0.08	0.1568	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.235248	NA	NA	0.211744	0.100545	NA	0.167	NA	5.442556
1108	11	118955679	118955679	C	T	UTR5	HMBS	NM_000190:c.-65C>T,NM_001258208:c.-65C>T,NM_001258209:c.-3304C>T	NA	NA	UTR5	ENSG00000256269	ENST00000545621:c.-65C>T,ENST00000278715:c.-65C>T,ENST00000542729:c.-3304C>T,ENST00000537841:c.-3304C>T,ENST00000536813:c.-65C>T,ENST00000546302:c.-65C>T,ENST00000442944:c.-3304C>T,ENST00000542822:c.-65C>T,ENST00000544387:c.-65C>T,ENST00000535793:c.-65C>T,ENST00000543090:c.-65C>T	NA	NA	NA	NA	11q23.3	NA	Name=Max,ELF1_(SC-631),E2F4,GABP,HMGN3,USF2,TAF1,ETS1,BCLAF1_(M33-P5B11),eGFP-JunD,USF1_(SC-8983),Pol2,ATF3,Mxi1_(bHLH),Pol2(phosphoS2),CCNT2,c-Myc,HEY1,NFKB,TBP,IRF1,THAP1_(SC-98174),USF-1,HA-E2F1,Sin3Ak-20,Pol2-4H8,RFX5_(N-494),Egr-1	Name=148	NA	rs589925	0.44	0.44	0.379	0.404153	0.4712	0.7063	0.2795	0.112	0.5072	0.47	0.74	0.31	0.14	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.100709	NA	NA	0.419745	0.160116	NA	0.319	NA	5.4423884
1108	10	125521533	125521533	G	A	exonic	CPXM2	NA	synonymous SNV	CPXM2:NM_198148:exon11:c.C1632T:p.D544D	exonic	ENSG00000121898	NA	synonymous SNV	ENSG00000121898:ENST00000241305:exon11:c.C1632T:p.D544D	Score=568;Name=lod=271	NA	10q26.13	Score=921;Name=V$MAX_01	NA	NA	NA	rs10794566	0.64	0.64	0.596	0.60643	0.7684	0.5655	0.7277	0.4614	0.592	0.78	0.55	0.73	0.47	0.7071	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.421479	1.421479	NA	0.749419	0.508625	NA	0.616	NA	5.4417476
1108	11	43920006	43920006	A	G	ncRNA_exonic	SEC14L1P1	NA	NA	NA	ncRNA_exonic	ENSG00000213693	NA	NA	NA	Score=799;Name=lod=2356	NA	11p11.2	NA	NA	NA	NA	rs7107050	0.25	0.25	0.213	0.271565	0.2256	0.2391	0.4179	0.1392	0.4274	0.24	0.27	0.4	0.13	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.331777	NA	NA	NA	NA	NA	0.261	NA	5.4410666
1108	2	185800905	185800905	A	T	exonic	ZNF804A	NA	nonsynonymous SNV	ZNF804A:NM_194250:exon4:c.A782T:p.Q261L	exonic	ENSG00000170396	NA	nonsynonymous SNV	ENSG00000170396:ENST00000302277:exon4:c.A782T:p.Q261L	NA	NA	2q32.1	NA	NA	NA	NA	rs12476147	0.66	0.66	0.643	0.619209	0.6193	0.8373	0.6945	0.438	0.5859	0.64	0.86	0.68	0.44	0.6448	0.86	0.22	T	0.0	B	0.0	B	0.203	N	1.000	P	-1.5	N	3.49	T	-1.065	T	0.000	T	0.038	0.849	8.431	0.194	-0.220	-0.501	1.011	0.848607	NA	0.41	0.628518	0.478665	NA	0.587	NA	5.4407154
1108	14	74061968	74061968	T	C	exonic	ACOT4	NA	synonymous SNV	ACOT4:NM_152331:exon3:c.T876C:p.I292I	exonic	ENSG00000177465	NA	synonymous SNV	ENSG00000177465:ENST00000326303:exon3:c.T876C:p.I292I	Score=340;Name=lod=32	NA	14q24.3	Score=854;Name=V$MRF2_01	NA	NA	NA	rs2010070	0.86	0.86	0.867	0.861821	0.7276	0.9296	0.8501	0.9887	0.7669	0.72	0.96	0.82	0.99	0.7736	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.347044	NA	NA	0.724767	0.945075	NA	0.768	NA	5.4406996
1108	1	183079853	183079853	T	C	intronic	LAMC1	NA	NA	NA	intronic	ENSG00000135862	NA	NA	NA	NA	NA	1q25.3	Score=869;Name=V$CREB_02	NA	Name=6	NA	rs6672093	0.51	0.51	0.461	0.504992	0.5596	0.628	0.6138	0.2398	0.6033	0.57	0.58	0.57	0.29	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.889956	1.889956	NA	NA	NA	NA	0.428	NA	5.4404
1108	20	36850940	36850940	G	C	exonic	KIAA1755	NA	synonymous SNV	KIAA1755:NM_001029864:exon10:c.C2328G:p.P776P	exonic	ENSG00000149633	NA	synonymous SNV	ENSG00000149633:ENST00000435901:exon3:c.C225G:p.P75P,ENSG00000149633:ENST00000279024:exon10:c.C2328G:p.P776P	NA	NA	20q11.23	NA	NA	NA	NA	rs41310010	0.1	0.1	0.102	0.109026	0.0696	0.0992	0.0461	0.1649	0.1288	0.07	0.1	0.06	0.18	0.0891	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.979913	NA	NA	0.067674	0.154335	NA	0.051	NA	5.4402926
1108	22	42905177	42905177	T	C	ncRNA_UTR3	RRP7A	NA	NA	NA	ncRNA_intronic	ENSG00000172250	NA	NA	NA	NA	NA	22q13.2	NA	NA	Name=4	NA	rs1056566	0.49	0.49	0.473	0.521166	0.2266	0.874	0.2104	0.7012	0.4376	0.22	0.87	0.19	0.69	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.504915	NA	NA	NA	NA	NA	0.326	NA	5.4400666
1108	18	3582272	3582272	A	C	intronic	DLGAP1	NA	NA	NA	intronic	ENSG00000170579	NA	NA	NA	Score=701;Name=lod=939	NA	18p11.31	NA	Name=GATA-2	NA	NA	rs11662259	0.18	0.18	0.171	0.179912	0.174	0.1558	0.1729	0.1573	0.2464	0.17	0.19	0.15	0.2	0.1955	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.180981	NA	NA	0.190465	0.169542	NA	0.21	NA	5.440035
1108	3	53321631	53321631	A	C	exonic	DCP1A	NA	synonymous SNV	DCP1A:NM_018403:exon10:c.T1716G:p.V572V	exonic	ENSG00000162290	NA	synonymous SNV	ENSG00000162290:ENST00000606822:exon9:c.T1608G:p.V536V,ENSG00000162290:ENST00000607628:exon10:c.T1722G:p.V574V,ENSG00000162290:ENST00000294241:exon11:c.T1716G:p.V572V	Score=521;Name=lod=175	NA	3p21.1	NA	NA	NA	NA	rs9628	0.35	0.35	0.376	0.392173	0.4155	0.1845	0.353	0.4766	0.4959	0.42	0.15	0.34	0.5	0.3972	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.198207	NA	NA	0.413939	0.46178	NA	0.348	NA	5.4400276
1108	15	63047778	63047778	C	T	exonic	TLN2	NA	synonymous SNV	TLN2:NM_015059:exon34:c.C4524T:p.C1508C	exonic	ENSG00000171914	NA	synonymous SNV	ENSG00000171914:ENST00000494733:exon10:c.C1266T:p.C422C,ENSG00000171914:ENST00000306829:exon34:c.C4524T:p.C1508C,ENSG00000171914:ENST00000561311:exon36:c.C4524T:p.C1508C	Score=517;Name=lod=168	NA	15q22.2	Score=913;Name=V$CEBPB_01	NA	NA	NA	rs8033767	0.66	0.66	0.602	0.648962	0.7624	0.6101	0.8256	0.3949	0.7904	0.77	0.64	0.8	0.41	0.7199	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.459142	1.459142	NA	0.744651	0.49251	NA	0.623	NA	5.4397156
1108	7	55238087	55238087	C	T	exonic	EGFR	NA	synonymous SNV	EGFR:NM_201284:exon16:c.C1968T:p.H656H	exonic	ENSG00000146648	NA	synonymous SNV	ENSG00000146648:ENST00000344576:exon16:c.C1968T:p.H656H	NA	NA	7p11.2	NA	NA	NA	NA	rs10258429	0.1	0.1	0.104	0.11242	0.0736	0.0496	0.049	0.2398	0.09	0.07	0.05	0.07	0.23	0.083	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.656236	NA	NA	0.070465	0.20926	NA	0.152	NA	5.4396016
1108	6	153345647	153345647	G	A	intronic	RGS17	NA	NA	NA	intronic	ENSG00000091844	NA	NA	NA	NA	NA	6q25.2	NA	Name=Rad21,NFKB,CTCF,CTCF_(SC-5916),TCF4,SMC3_(ab9263)	Name=145	NA	rs2073259	0.12	0.12	0.12	0.091853	0.2058	0.0784	0.0937	0.0106	0.0971	0.21	0.09	0.12	0.01	0.1567	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.391673	NA	NA	0.198372	0.041988	ID=COSN167915;OCCURENCE=1(large_intestine)	0.043	NA	5.439128
1108	15	90349461	90349461	G	A	exonic	ANPEP	NA	synonymous SNV	ANPEP:NM_001150:exon2:c.C354T:p.D118D	exonic	ENSG00000166825	NA	synonymous SNV	ENSG00000166825:ENST00000300060:exon2:c.C354T:p.D118D	NA	NA	15q26.1	NA	NA	NA	NA	rs41276922	0.05	0.05	0.05	0.0425319	0.0885	0.001	0.0403	0.0424	0.0399	0.09	0.0035	0.03	0.05	0.0616	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.531535	NA	NA	0.078274	0.045682	NA	0.094	NA	5.4382926
1108	7	21630982	21630982	A	G	exonic	DNAH11	NA	synonymous SNV	DNAH11:NM_001277115:exon14:c.A2454G:p.A818A	exonic	ENSG00000105877	NA	synonymous SNV	ENSG00000105877:ENST00000328843:exon14:c.A2454G:p.A818A,ENSG00000105877:ENST00000409508:exon14:c.A2454G:p.A818A	NA	NA	7p15.3	NA	NA	NA	NA	rs4615458	0.53	0.53	0.494	0.530351	0.4006	0.749	0.3977	0.5855	0.4581	0.4	0.73	0.41	0.6	0.4348	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.94406	NA	NA	0.393051	0.51773	NA	0.565	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000079616.1;CLNDSDB=.;CLNDSDBID=.	5.4382156
1108	2	10914867	10914867	A	T	intronic	ATP6V1C2	NA	NA	NA	intronic	ENSG00000143882	NA	NA	NA	NA	NA	2p25.1	NA	Name=CEBPB	Name=19	NA	rs56195743	0.1	0.1	0.095	0.0832668	0.2038	0.0516	0.1225	0.0083	0.0654	0.19	0.06	0.1	0.02	0.1496	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.095649	NA	NA	0.208488	0.043804	NA	0.174	NA	5.438112
1108	7	45009325	45009325	G	A	exonic	MYO1G	NA	synonymous SNV	MYO1G:NM_033054:exon11:c.C1482T:p.H494H	exonic	ENSG00000136286	NA	synonymous SNV	ENSG00000136286:ENST00000258787:exon11:c.C1482T:p.H494H	Score=512;Name=lod=161	NA	7p13	NA	NA	NA	NA	rs3735484	0.43	0.43	0.418	0.417732	0.4085	0.6081	0.3732	0.3169	0.3988	0.4	0.64	0.37	0.29	0.4079	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.328164	NA	NA	0.412983	0.322742	NA	0.471	NA	5.4372836
1108	20	42574442	42574442	T	C	intronic	TOX2	NA	NA	NA	UTR5	ENSG00000124191	ENST00000358131:c.-111T>C	NA	NA	Score=665;Name=lod=673	NA	20q13.12	Score=953;Name=V$GATA2_01	NA	NA	NA	rs4812769	0.81	0.81	0.794	0.810304	0.7296	0.9683	0.8184	0.7526	0.8027	0.73	0.98	0.8	0.75	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.066123	NA	NA	NA	NA	NA	0.754	NA	5.4370667
1108	1	201489569	201489569	G	A	ncRNA_exonic	RPS10P7	NA	NA	NA	ncRNA_exonic	ENSG00000223396,ENSG00000242150	NA	NA	NA	Score=746;Name=lod=1439	NA	1q32.1	NA	NA	NA	NA	rs7354939	0.11	0.11	0.096	0.0894569	0.2296	NA	0.134	0.0613	0.044	0.22	NA	0.15	0.05	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.048736	NA	NA	NA	NA	NA	0.065	NA	5.4370666
1108	11	67200819	67200819	C	T	exonic	RPS6KB2	NA	synonymous SNV	RPS6KB2:NM_003952:exon10:c.C807T:p.F269F	exonic	ENSG00000175634	NA	synonymous SNV	ENSG00000175634:ENST00000312629:exon10:c.C807T:p.F269F	Score=369;Name=lod=42	NA	11q13.2	NA	NA	NA	NA	rs4930427	0.41	0.41	0.377	0.35603	0.4225	0.3264	0.5389	0.3283	0.226	0.44	0.32	0.51	0.37	0.3872	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.955471	NA	NA	0.420257	0.309898	ID=COSM147279;OCCURENCE=1(stomach)	0.442	NA	5.4367096
1108	8	18257994	18257994	C	T	exonic	NAT2	NA	synonymous SNV	NAT2:NM_000015:exon2:c.C481T:p.L161L	exonic	ENSG00000156006	NA	synonymous SNV	ENSG00000156006:ENST00000286479:exon2:c.C481T:p.L161L,ENSG00000156006:ENST00000520116:exon2:c.C91T:p.L31L	Score=405;Name=lod=59	NA	8p22	NA	NA	NA	NA	rs1799929	0.28	0.28	0.248	0.267971	0.4354	0.0367	0.3444	0.2375	0.3211	0.44	0.03	0.36	0.26	0.364	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.661767	NA	NA	0.431047	0.253745	NA	0.283	NA	5.4362196
1108	1	111824255	111824255	C	T	ncRNA_exonic	CHIAP2	NA	NA	NA	ncRNA_exonic	ENSG00000203878	NA	NA	NA	NA	NA	1p13.2	NA	NA	Name=11	NA	rs6537691	0.2	0.2	0.219	0.201078	0.2306	0.13	0.1686	0.2428	0.2106	0.24	0.14	0.17	0.25	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.204472	NA	NA	NA	NA	NA	0.188	NA	5.4360666
1108	19	57642782	57642782	C	A	exonic	USP29	NA	stopgain	USP29:NM_020903:exon4:c.C2739A:p.Y913X	exonic	ENSG00000131864	NA	stopgain	ENSG00000131864:ENST00000598197:exon1:c.C2739A:p.Y913X,ENSG00000131864:ENST00000254181:exon4:c.C2739A:p.Y913X	NA	NA	19q13.43	NA	NA	NA	NA	rs9973206	0.93	0.93	0.935	0.952077	0.837	1	0.9265	0.9932	0.9836	0.85	1	0.93	0.99	0.8913	1	1	T	.	.	.	.	.	.	0.998	P	.	.	.	.	.	.	.	.	.	7.165	38	-0.625	-0.616	0.277	0.115	7.164934	7.164934	0	0.836047	0.974569	NA	0.804	NA	5.435653
1108	17	61987576	61987576	G	A	exonic	CSHL1	NA	synonymous SNV	CSHL1:NM_001318:exon3:c.C135T:p.S45S,CSHL1:NM_022580:exon3:c.C168T:p.S56S,CSHL1:NM_022579:exon4:c.C417T:p.S139S,CSHL1:NM_022581:exon4:c.C348T:p.S116S	exonic	ENSG00000204414	NA	synonymous SNV	ENSG00000204414:ENST00000346606:exon3:c.C135T:p.S45S,ENSG00000204414:ENST00000438387:exon3:c.C168T:p.S56S,ENSG00000204414:ENST00000450719:exon3:c.C135T:p.S45S,ENSG00000204414:ENST00000561003:exon3:c.C168T:p.S56S,ENSG00000204414:ENST00000259003:exon4:c.C231T:p.S77S,ENSG00000204414:ENST00000309894:exon4:c.C417T:p.S139S	Score=528;Name=lod=186	NA	17q23.3	NA	NA	NA	NA	rs2246207	0.41	0.41	0.388	0.389776	0.4225	0.4196	0.3501	0.4637	0.2536	0.42	0.38	0.4	0.44	0.3939	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.232252	NA	NA	0.415233	0.491375	ID=COSM1178447,COSM1178448;OCCURENCE=1(prostate)	0.471	NA	5.4350336
1109	9	127177736	127177736	G	C	UTR5	PSMB7	NM_002799:c.-32C>G	NA	NA	upstream	ENSG00000136930	NA	NA	NA	Score=300;Name=lod=22	NA	9q33.3	NA	Name=ELK4,FOXA1_(C-20),JunD,Pol2(b),AP-2alpha,Sin3Ak-20,Pol2-4H8,KAP1,RFX5_(N-494),Egr-1,NANOG_(SC-33759),YY1,SIX5,SRF,NFKB,HEY1,ZEB1_(SC-25388),STAT2,AP-2gamma,TBP,IRF1,THAP1_(SC-98174),HMGN3,GABP,ETS1,TAF1,SP2_(SC-643),BCLAF1_(M33-P5B11),TAF7_(SQ-8),BRCA1_(C-1863),YY1_(C-20),TR4,SP1,Mxi1_(bHLH),Pol2,TCF4,Pol2(phosphoS2),STAT1,Max,FOXA2_(SC-6554),ELF1_(SC-631),CHD2_(N-1250),GTF2F1_(RAP-74),CEBPB,CTCF,p300	Name=148	NA	rs2236386	0.4	0.4	0.391	0.359824	0.5577	0.3214	0.464	0.1997	0.3384	0.56	0.31	0.44	0.22	0.4753	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.429111	1.429111	NA	0.532558	0.233545	NA	0.435	NA	5.434442
1109	8	62489334	62489334	C	T	exonic	ASPH	NA	synonymous SNV	ASPH:NM_001164750:exon16:c.G1059A:p.A353A,ASPH:NM_004318:exon16:c.G1146A:p.A382A	exonic	ENSG00000198363	NA	synonymous SNV	ENSG00000198363:ENST00000522349:exon5:c.G405A:p.A135A,ENSG00000198363:ENST00000379454:exon16:c.G1146A:p.A382A,ENSG00000198363:ENST00000541428:exon16:c.G1059A:p.A353A	NA	NA	8q12.3	NA	NA	NA	NA	rs16927574	0.14	0.14	0.139	0.130591	0.0795	0.2371	0.0994	0.1551	0.0624	0.06	0.26	0.07	0.15	0.0886	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.942251	NA	NA	0.064767	0.133227	NA	0.116	NA	5.4337996
1109	1	229568632	229568632	A	G	intronic	ACTA1	NA	NA	NA	intronic	ENSG00000143632	NA	NA	NA	NA	NA	1q42.13	NA	Name=SUZ12	NA	NA	rs11803533	0.26	0.26	0.253	0.273962	0.1779	0.1637	0.3098	0.503	0.1513	0.17	0.15	0.25	0.53	0.2082	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.614869	NA	NA	0.180698	0.450068	NA	0.225	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000079463.2;CLNDSDB=.;CLNDSDBID=.	5.433202
1109	5	140784427	140784427	T	C	exonic	PCDHGA9	NA	synonymous SNV	PCDHGA9:NM_018921:exon1:c.T1908C:p.D636D,PCDHGA9:NM_032089:exon1:c.T1908C:p.D636D	exonic	ENSG00000261934	NA	synonymous SNV	ENSG00000261934:ENST00000573521:exon1:c.T1908C:p.D636D	NA	NA	5q31.3	NA	NA	NA	NA	rs3749769	0.12	0.12	0.115	0.128594	0.0586	0.1181	0.1527	0.177	0.1288	0.07	0.12	0.13	0.18	0.1002	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.867354	NA	NA	0.074971	0.179405	NA	0.123	NA	5.4328956
1109	13	96506664	96506664	A	G	exonic	UGGT2	NA	synonymous SNV	UGGT2:NM_020121:exon35:c.T4074C:p.T1358T	exonic	ENSG00000102595	NA	synonymous SNV	ENSG00000102595:ENST00000376747:exon35:c.T4074C:p.T1358T	Score=471;Name=lod=109	NA	13q32.1	NA	NA	NA	NA	rs11070154	0.34	0.34	0.344	0.329073	0.4394	0.3155	0.2622	0.2526	0.3804	0.42	0.3	0.36	0.26	0.3781	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.131839	NA	NA	0.416512	0.269405	ID=COSM1128340;OCCURENCE=1(prostate)	0.341	NA	5.4326546
1109	6	128388799	128388799	G	T	exonic	PTPRK	NA	synonymous SNV	PTPRK:NM_001135648:exon12:c.C2022A:p.L674L,PTPRK:NM_002844:exon12:c.C2022A:p.L674L	exonic	ENSG00000152894	NA	synonymous SNV	ENSG00000152894:ENST00000368207:exon12:c.C2022A:p.L674L,ENSG00000152894:ENST00000368210:exon12:c.C2022A:p.L674L,ENSG00000152894:ENST00000368213:exon12:c.C2022A:p.L674L,ENSG00000152894:ENST00000368215:exon12:c.C2022A:p.L674L,ENSG00000152894:ENST00000368226:exon12:c.C2022A:p.L674L,ENSG00000152894:ENST00000368227:exon12:c.C2022A:p.L674L,ENSG00000152894:ENST00000532331:exon12:c.C2022A:p.L674L	NA	NA	6q22.33	Score=825;Name=V$NFKB_Q6	NA	NA	NA	rs35030557	0.3	0.3	0.251	0.245208	0.4334	0.2411	0.4092	0.0408	0.2157	0.44	0.26	0.43	0.04	0.3739	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.874822	NA	NA	0.427326	0.095778	NA	0.188	NA	5.4320406
1109	3	191093053	191093053	T	C	exonic	CCDC50	NA	synonymous SNV	CCDC50:NM_178335:exon6:c.T651C:p.H217H	exonic	ENSG00000152492	NA	synonymous SNV	ENSG00000152492:ENST00000392456:exon6:c.T651C:p.H217H	NA	NA	3q28	NA	NA	NA	NA	rs2028572	0.5	0.5	0.512	0.501997	0.4105	0.4702	0.4697	0.7239	0.3517	0.42	0.44	0.46	0.72	0.4285	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.263037	NA	NA	0.395814	0.670676	NA	0.464	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000041446.1;CLNDSDB=.;CLNDSDBID=.	5.4318526
1109	13	52541090	52541090	T	C	intronic	ATP7B	NA	NA	NA	ncRNA_exonic	ENSG00000236044	NA	NA	NA	Score=517;Name=lod=169	NA	13q14.3	NA	NA	Name=2	NA	rs4941716	0.88	0.88	0.879	0.871605	0.9016	0.9583	0.9092	0.7648	0.8691	0.89	0.97	0.91	0.76	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.831101	NA	NA	NA	NA	NA	0.841	NA	5.4317333
1109	15	45694610	45694610	C	T	UTR5	SPATA5L1	NM_024063:c.-18C>T	NA	NA	UTR5	ENSG00000171763	ENST00000305560:c.-18C>T,ENST00000559860:c.-18C>T,ENST00000531970:c.-18C>T	NA	NA	NA	NA	15q21.1	NA	Name=PAX5-C20,PAX5-N19,SIX5,SRF,c-Myc,ZEB1_(SC-25388),NFKB,TBP,Nrf1,ELK4,Pol2(b),Pol2-4H8,HDAC2_(SC-6296),YY1,ELF1_(SC-631),CHD2_(N-1250),CEBPB,GTF2F1_(RAP-74),GABP,TAF1,BCLAF1_(M33-P5B11),YY1_(C-20),MEF2A,PU.1,SP1,Pol2,Pol2(phosphoS2)	Name=148	NA	rs1365610	0.46	0.46	0.441	0.452476	0.2734	0.8065	0.5216	0.3268	0.3926	0.27	0.85	0.46	0.29	0.365	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.526749	NA	NA	0.263274	0.284836	NA	0.312	NA	5.4316594
1109	19	56831508	56831508	G	A	intergenic	ZSCAN5A,ZNF542	dist=91849;dist=47960	NA	NA	ncRNA_exonic	ENSG00000266907	NA	NA	NA	Score=706;Name=lod=986	NA	19q13.43	NA	NA	Name=5	NA	rs7245993	0.7	0.7	0.734	0.720847	0.5686	0.752	0.6225	0.9486	0.6074	0.55	0.74	0.64	0.95	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.219799	NA	NA	NA	NA	NA	0.688	NA	5.4314
1109	6	7231770	7231770	A	G	exonic	RREB1	NA	synonymous SNV	RREB1:NM_001003698:exon10:c.A3438G:p.P1146P,RREB1:NM_001003699:exon10:c.A3438G:p.P1146P,RREB1:NM_001003700:exon10:c.A3438G:p.P1146P,RREB1:NM_001168344:exon10:c.A3438G:p.P1146P	exonic	ENSG00000124782	NA	synonymous SNV	ENSG00000124782:ENST00000334984:exon10:c.A3438G:p.P1146P,ENSG00000124782:ENST00000349384:exon10:c.A3438G:p.P1146P,ENSG00000124782:ENST00000379933:exon10:c.A3438G:p.P1146P,ENSG00000124782:ENST00000379938:exon10:c.A3438G:p.P1146P	NA	NA	6p24.3	NA	NA	NA	NA	rs34561875	0.1	0.1	0.082	0.113419	0.0706	0.2371	0.1354	0.0726	0.0695	0.07	0.19	0.1	0.06	0.1022	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.958872	NA	NA	0.06272	0.059068	NA	0.072	NA	5.4311466
1109	2	231037616	231037616	A	G	exonic	SP110	NA	synonymous SNV	SP110:NM_004509:exon15:c.T1650C:p.G550G,SP110:NM_080424:exon15:c.T1650C:p.G550G	exonic	ENSG00000135899	NA	synonymous SNV	ENSG00000135899:ENST00000258381:exon15:c.T1650C:p.G550G,ENSG00000135899:ENST00000358662:exon15:c.T1650C:p.G550G	NA	NA	2q37.1	NA	NA	NA	NA	rs35495464	0.05	0.05	0.038	0.0399361	0.0924	0.001	0.049	0.0076	0.0634	0.09	0.0017	0.06	0.01	0.0606	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.120024	NA	NA	0.082558	0.016568	NA	0.072	NA	5.4311086
1109	9	127619553	127619553	C	G	intronic	WDR38	NA	NA	NA	intronic	ENSG00000136918	NA	NA	NA	NA	NA	9q33.3	NA	Name=Pol2(phosphoS2),Pol2,GTF2F1_(RAP-74),Egr-1,Pol2-4H8	Name=12	NA	rs10819000	0.49	0.49	0.485	0.494409	0.5696	0.3839	0.5058	0.4244	0.6176	0.6	0.37	0.53	0.45	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.765771	NA	NA	NA	NA	NA	0.543	NA	5.4304
1109	1	206944645	206944645	T	C	intronic	IL10	NA	NA	NA	intronic	ENSG00000136634	NA	NA	NA	NA	Name=Behcet's disease	1q32.1	NA	Name=Pol2,PU.1	Name=19	NA	rs1518111	0.6	0.6	0.581	0.573083	0.7793	0.3244	0.6715	0.5658	0.5573	0.78	0.32	0.67	0.58	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.83289	1.83289	NA	0.790383	0.599711	NA	0.645	NA	5.430317
1109	4	187122355	187122355	T	C	exonic	CYP4V2	NA	synonymous SNV	CYP4V2:NM_207352:exon7:c.T846C:p.C282C	exonic	ENSG00000145476	NA	synonymous SNV	ENSG00000145476:ENST00000378802:exon7:c.T846C:p.C282C	NA	NA	4q35.2	NA	NA	NA	NA	rs3736456	0.16	0.16	0.143	0.16274	0.0656	0.3472	0.1931	0.0719	0.1738	0.06	0.37	0.16	0.07	0.1162	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.212801	NA	NA	0.056279	0.05833	ID=COSM1428959;OCCURENCE=1(large_intestine)	0.138	NA	5.4285876
1109	2	234775675	234775675	G	T	ncRNA_exonic	MSL3P1	NA	NA	NA	ncRNA_exonic	ENSG00000224287	NA	NA	NA	Score=552;Name=lod=234	NA	2q37.1	NA	NA	NA	NA	rs213544	0.06	0.06	0.069	0.0499201	0.0835	0.0506	0.0432	0.0219	0.0573	0.08	0.05	0.05	0.04	0.0707	0.087	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.020781	NA	NA	0.083909	0.039017	NA	0.058	NA	5.4285576
1109	2	201468732	201468732	C	G	intronic	AOX1	NA	NA	NA	intronic	ENSG00000138356	NA	NA	NA	NA	NA	2q33.1	NA	Name=STAT3,c-Fos,JunD	Name=99	NA	rs2293525	0.3	0.3	0.29	0.276158	0.174	0.4435	0.2709	0.2534	0.2434	0.19	0.45	0.25	0.32	0.2188	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.251802	NA	NA	0.178837	0.25261	NA	0.362	NA	5.428363
1109	11	57485772	57485772	A	G	ncRNA_intronic	TMX2-CTNND1	NA	NA	NA	ncRNA_exonic	ENSG00000213592	NA	NA	NA	Score=624;Name=lod=459	NA	11q12.1	NA	NA	NA	NA	rs61888876	NA	NA	NA	0.405351	0.2386	0.7966	0.4712	0.2398	0.3507	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.767459	NA	NA	NA	NA	NA	NA	NA	5.4280666
1109	7	51287470	51287470	A	G	exonic	COBL	NA	synonymous SNV	COBL:NM_015198:exon2:c.T213C:p.S71S	exonic	ENSG00000106078	NA	synonymous SNV	ENSG00000106078:ENST00000265136:exon2:c.T213C:p.S71S,ENSG00000106078:ENST00000395540:exon2:c.T213C:p.S71S,ENSG00000106078:ENST00000395542:exon2:c.T213C:p.S71S,ENSG00000106078:ENST00000441453:exon2:c.T213C:p.S71S,ENSG00000106078:ENST00000449281:exon2:c.T165C:p.S55S	Score=456;Name=lod=95	NA	7p12.1	NA	Name=CTCF	NA	NA	rs801142	0.76	0.76	0.771	0.75639	0.7425	0.7817	0.804	0.7572	0.7096	0.74	0.8	0.78	0.73	0.7545	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.208091	NA	NA	0.74186	0.735134	ID=COSM453217;OCCURENCE=1(breast)	0.754	NA	5.4278066
1109	1	24706113	24706113	G	A	intronic	STPG1	NA	NA	NA	exonic	ENSG00000001460	NA	unknown	UNKNOWN	NA	NA	1p36.11	NA	NA	NA	NA	rs3765428	0.43	0.43	0.408	0.415335	0.3618	0.4444	0.5058	0.4773	0.2924	0.38	0.44	0.47	0.47	0.3694	0.48	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.951	T	0.000	T	.	-0.485	1.766	-2.19	-0.742	-0.824	13.102	-0.485484	NA	NA	0.341163	0.482751	NA	0.312	NA	5.427637
1109	3	185905876	185905876	G	A	intronic	DGKG	NA	NA	NA	intronic	ENSG00000058866	NA	NA	NA	NA	NA	3q27.2	Score=761;Name=V$TCF11MAFG_01	Name=MafK_(SC-477),MafF_(M8194),MafK_(ab50322)	NA	NA	rs13087397	0.51	0.51	0.445	0.445487	0.5726	0.7004	0.647	0.0613	0.4284	0.59	0.71	0.61	0.06	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.001096	NA	NA	NA	NA	NA	0.362	NA	5.4274
1109	1	32127953	32127953	G	A	exonic	COL16A1	NA	synonymous SNV	COL16A1:NM_001856:exon58:c.C3663T:p.D1221D	exonic	ENSG00000084636	NA	synonymous SNV	ENSG00000084636:ENST00000440437:exon5:c.C234T:p.D78D,ENSG00000084636:ENST00000373672:exon58:c.C3663T:p.D1221D,ENSG00000084636:ENST00000271069:exon59:c.C3663T:p.D1221D	Score=505;Name=lod=151	NA	1p35.2	NA	NA	NA	NA	rs2271928	0.51	0.51	0.553	0.471845	0.4016	0.6369	0.4741	0.5174	0.3108	0.42	0.63	0.46	0.52	0.4388	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.092488	NA	NA	0.398885	0.479081	NA	0.428	NA	5.4273816
1109	19	2939289	2939289	A	C	exonic	ZNF77	NA	synonymous SNV	ZNF77:NM_021217:exon2:c.T120G:p.L40L	exonic	ENSG00000175691	NA	synonymous SNV	ENSG00000175691:ENST00000314531:exon2:c.T120G:p.L40L	NA	NA	19p13.3	NA	NA	NA	NA	rs12608916	0.19	0.19	0.163	0.175719	0.1153	0.371	0.2478	0.1021	0.0849	0.11	0.4	0.19	0.08	0.0032	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.09633	NA	NA	0.121047	0.109169	NA	0.014	NA	5.4271196
1109	5	123984763	123984763	C	T	exonic	ZNF608	NA	synonymous SNV	ZNF608:NM_020747:exon4:c.G1314A:p.A438A	exonic	ENSG00000168916	NA	synonymous SNV	ENSG00000168916:ENST00000306315:exon4:c.G1314A:p.A438A,ENSG00000168916:ENST00000504926:exon4:c.G33A:p.A11A,ENSG00000168916:ENST00000509799:exon5:c.G1314A:p.A438A,ENSG00000168916:ENST00000513986:exon5:c.G1314A:p.A438A	NA	NA	5q23.2	NA	Name=FOSL2	Name=4	NA	rs7708070	0.76	0.76	0.766	0.761182	0.7505	0.7609	0.5951	0.885	0.7229	0.75	0.76	0.63	0.88	0.7449	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.25095	NA	NA	0.744237	0.867393	NA	0.841	NA	5.4270296
1109	13	25518456	25518456	C	T	ncRNA_intronic	TPTE2P1	NA	NA	NA	ncRNA_intronic	ENSG00000251299,ENSG00000253771	NA	NA	NA	NA	NA	13q12.13	NA	Name=PAX5-C20,PAX5-N19,MEF2A	NA	NA	rs113328081	0.19	0.19	0.174	0.24361	0.2406	0.0843	0.1628	0.3124	0.3753	0.22	0.09	0.2	0.28	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.802186	NA	NA	NA	NA	NA	0.138	NA	5.4260666
1109	19	6681991	6681991	G	A	exonic	C3	NA	synonymous SNV	C3:NM_000064:exon35:c.C4311T:p.A1437A	exonic	ENSG00000125730	NA	synonymous SNV	ENSG00000125730:ENST00000596548:exon6:c.C432T:p.A144A,ENSG00000125730:ENST00000245907:exon35:c.C4311T:p.A1437A	NA	NA	19p13.3	NA	NA	NA	NA	rs7951	0.09	0.09	0.073	0.091254	0.0746	0.0942	0.0634	0.0991	0.1145	0.08	0.12	0.06	0.09	0.0852	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.976064	NA	NA	0.080814	0.098956	NA	0.058	NA	5.4260526
1109	1	201060865	201060865	G	A	exonic	CACNA1S	NA	synonymous SNV	CACNA1S:NM_000069:exon5:c.C597T:p.I199I	exonic	ENSG00000081248	NA	synonymous SNV	ENSG00000081248:ENST00000362061:exon5:c.C597T:p.I199I,ENSG00000081248:ENST00000367338:exon5:c.C597T:p.I199I	Score=624;Name=lod=460	NA	1q32.1	NA	NA	NA	NA	rs2296383	0.33	0.33	0.313	0.305112	0.4105	0.3929	0.3963	0.0522	0.3834	0.42	0.39	0.41	0.05	0.3887	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.340194	1.340194	NA	0.441744	0.111212	NA	0.355	NA	5.4257226
1109	15	41856543	41856543	A	G	intronic	TYRO3	NA	NA	NA	intronic	ENSG00000092445	NA	NA	NA	NA	NA	15q15.1	NA	Name=ZNF263,Pol2(b),NRSF,CTCF	Name=49	NA	rs11070339	0.68	0.68	0.654	0.653554	0.5746	0.9762	0.696	0.447	0.6513	0.58	0.98	0.67	0.47	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.28495	NA	NA	NA	NA	NA	0.536	NA	5.4254
1109	20	1688813	1688813	T	C	intergenic	SIRPG,LOC100289473	dist=50388;dist=65198	NA	NA	ncRNA_exonic	ENSG00000223750	NA	NA	NA	NA	NA	20p13	NA	Name=GATA-1	Name=10	NA	rs513119	0.49	0.49	0.449	0.482428	0.5746	0.3671	0.6354	0.4584	0.4305	0.57	0.39	0.59	0.43	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.376031	NA	NA	NA	NA	NA	0.543	NA	5.4254
1109	4	39921942	39921942	A	G	exonic	PDS5A	NA	synonymous SNV	PDS5A:NM_001100399:exon7:c.T732C:p.A244A,PDS5A:NM_001100400:exon7:c.T732C:p.A244A	exonic	ENSG00000121892	NA	synonymous SNV	ENSG00000121892:ENST00000303538:exon7:c.T732C:p.A244A,ENSG00000121892:ENST00000503396:exon7:c.T732C:p.A244A	Score=580;Name=lod=303	NA	4p14	NA	NA	NA	NA	rs28449663	0.4	0.4	0.429	0.397364	0.4115	0.6637	0.2882	0.1407	0.5327	0.41	0.65	0.3	0.16	0.4186	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.20456	NA	NA	0.411336	0.171111	ID=COSM1485953,COSM447842;OCCURENCE=1(breast)	0.268	NA	5.4252306
1109	6	83949261	83949261	T	C	exonic	ME1	NA	synonymous SNV	ME1:NM_002395:exon8:c.A909G:p.G303G	exonic	ENSG00000065833	NA	synonymous SNV	ENSG00000065833:ENST00000541327:exon6:c.A411G:p.G137G,ENSG00000065833:ENST00000543031:exon7:c.A684G:p.G228G,ENSG00000065833:ENST00000369705:exon8:c.A909G:p.G303G	Score=503;Name=lod=147	NA	6q14.2	NA	NA	NA	NA	rs1180230	0.43	0.43	0.422	0.432907	0.4155	0.3472	0.4654	0.5991	0.2914	0.41	0.32	0.42	0.6	0.4119	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.041083	NA	NA	0.41407	0.55901	NA	0.478	NA	5.4251966
1110	13	110838814	110838814	A	G	exonic	COL4A1	NA	synonymous SNV	COL4A1:NM_001845:exon26:c.T1815C:p.P605P	exonic	ENSG00000187498	NA	synonymous SNV	ENSG00000187498:ENST00000375820:exon26:c.T1815C:p.P605P	NA	NA	13q34	NA	NA	NA	NA	rs61749897	0.12	0.12	0.099	0.096246	0.0924	0.1379	0.0793	0.0923	0.0746	0.1	0.16	0.09	0.12	0.0829	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.851619	NA	NA	0.067093	0.07921	NA	0.087	NA	5.4242736
1110	11	290891	290891	T	C	exonic	ATHL1	NA	synonymous SNV	ATHL1:NM_025092:exon4:c.T684C:p.Y228Y	exonic	ENSG00000142102	NA	synonymous SNV	ENSG00000142102:ENST00000409479:exon3:c.T684C:p.Y228Y,ENSG00000142102:ENST00000409548:exon4:c.T684C:p.Y228Y,ENSG00000142102:ENST00000409655:exon4:c.T153C:p.Y51Y	NA	NA	11p15.5	NA	NA	NA	NA	rs72636977	0.16	0.16	0.138	0.184904	0.0596	0.3075	0.2219	0.1672	0.1851	0.06	0.31	0.18	0.14	0.1288	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.874657	NA	NA	0.054302	0.147072	ID=COSM1475356,COSM428886;OCCURENCE=1(breast)	0.036	NA	5.4239646
1110	6	47649222	47649222	T	G	exonic	GPR111	NA	synonymous SNV	GPR111:NM_153839:exon7:c.T723G:p.S241S	exonic	ENSG00000164393	NA	synonymous SNV	ENSG00000164393:ENST00000398742:exon5:c.T723G:p.S241S,ENSG00000164393:ENST00000296862:exon6:c.T927G:p.S309S,ENSG00000164393:ENST00000507065:exon6:c.T723G:p.S241S,ENSG00000164393:ENST00000467205:exon7:c.T723G:p.S241S	NA	NA	6p12.3	Score=789;Name=V$CART1_01	NA	NA	NA	rs8180544	0.48	0.48	0.489	NA	NA	NA	NA	NA	NA	0.62	0.3	0.49	0.49	0.5955	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.453104	NA	NA	0.647252	0.4768	NA	0.435	NA	5.4239146
1110	20	3564672	3564672	C	T	exonic	ATRN	NA	synonymous SNV	ATRN:NM_001207047:exon17:c.C2544T:p.Y848Y,ATRN:NM_139321:exon17:c.C2892T:p.Y964Y,ATRN:NM_139322:exon17:c.C2892T:p.Y964Y	exonic	ENSG00000088812	NA	synonymous SNV	ENSG00000088812:ENST00000262919:exon17:c.C2892T:p.Y964Y,ENSG00000088812:ENST00000446916:exon17:c.C2892T:p.Y964Y	Score=641;Name=lod=536	NA	20p13	Score=781;Name=V$HTF_01	NA	NA	NA	rs235540	0.82	0.82	0.811	0.824481	0.7187	0.999	0.8141	0.7088	0.9172	0.74	1	0.81	0.74	0.787	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.107863	NA	NA	0.737093	0.719246	NA	0.71	NA	5.4238736
1110	1	57422484	57422484	C	T	exonic	C8B	NA	nonsynonymous SNV	C8B:NM_000066:exon3:c.G349A:p.G117R	exonic	ENSG00000021852	NA	nonsynonymous SNV	ENSG00000021852:ENST00000371237:exon3:c.G349A:p.G117R,ENSG00000021852:ENST00000535057:exon4:c.G163A:p.G55R,ENSG00000021852:ENST00000543257:exon4:c.G193A:p.G65R	Score=439;Name=lod=81	NA	1p32.2	NA	NA	NA	NA	rs1013579	0.98	0.98	0.983	0.986422	0.9652	1	0.9683	0.9992	0.9898	0.97	1	0.96	1	0.9773	1	0.8	T	0.0	B	0.0	B	0.014	N	1.000	P	.	.	1.89	T	-0.949	T	0.000	T	0.173	0.647	7.471	-0.165	-0.139	0.535	10.316	0.646669	NA	0.81	0.967209	0.99251	NA	0.978	NA	5.4236244
1110	2	232952286	232952286	A	G	exonic	DIS3L2	NA	synonymous SNV	DIS3L2:NM_001257281:exon6:c.A456G:p.Q152Q,DIS3L2:NM_001257282:exon6:c.A456G:p.Q152Q,DIS3L2:NM_152383:exon6:c.A456G:p.Q152Q	exonic	ENSG00000144535	NA	synonymous SNV	ENSG00000144535:ENST00000409307:exon5:c.A456G:p.Q152Q,ENSG00000144535:ENST00000433430:exon5:c.A456G:p.Q152Q,ENSG00000144535:ENST00000273009:exon6:c.A456G:p.Q152Q,ENSG00000144535:ENST00000325385:exon6:c.A456G:p.Q152Q,ENSG00000144535:ENST00000360410:exon6:c.A456G:p.Q152Q,ENSG00000144535:ENST00000390005:exon6:c.A456G:p.Q152Q,ENSG00000144535:ENST00000409401:exon6:c.A456G:p.Q152Q,ENSG00000144535:ENST00000445090:exon6:c.A456G:p.Q152Q	NA	NA	2q37.1	NA	NA	NA	NA	rs11887184	0.1	0.1	0.098	0.11242	0.0775	0.0327	0.1138	0.1989	0.1125	0.08	0.03	0.11	0.22	0.0961	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.072019	NA	NA	0.070007	0.177958	NA	0.08	NA	5.4230596
1110	4	47887991	47887991	G	A	exonic	NFXL1	NA	synonymous SNV	NFXL1:NM_152995:exon13:c.C1569T:p.T523T	exonic	ENSG00000170448	NA	synonymous SNV	ENSG00000170448:ENST00000329043:exon13:c.C1569T:p.T523T,ENSG00000170448:ENST00000381538:exon13:c.C1569T:p.T523T,ENSG00000170448:ENST00000464756:exon13:c.C1569T:p.T523T,ENSG00000170448:ENST00000507489:exon13:c.C1569T:p.T523T	Score=512;Name=lod=161	NA	4p12	Score=991;Name=V$AREB6_04	NA	NA	NA	rs6818556	0.73	0.73	0.722	0.716653	0.7505	0.6875	0.7478	0.6551	0.773	0.77	0.72	0.75	0.65	0.7441	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.521352	NA	NA	0.749186	0.682478	NA	0.768	NA	5.4228806
1110	6	30313227	30313227	G	A	intronic	RPP21,TRIM39-RPP21	NA	NA	NA	intronic	ENSG00000241370,ENSG00000248167	NA	NA	NA	NA	NA	6p22.1	NA	Name=Egr-1,Pol2,ZNF263,HA-E2F1,E2F6_(H-50),Pol2(b),CTCF,CCNT2	Name=140	NA	rs5030611	0.21	0.21	0.154	0.236022	0.165	0.4425	0.3228	0.0212	0.3252	0.16	0.41	0.25	0.03	0.2365	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.686731	1.686731	NA	0.175775	0.059603	NA	0.225	NA	5.422725
1110	6	24547606	24547606	G	A	intronic	KIAA0319	NA	NA	NA	intronic	ENSG00000137261	NA	NA	NA	NA	NA	6p22.3	NA	Name=Rad21,CTCF_(C-20),USF-1,CTCF,SMC3_(ab9263),CTCF_(SC-5916)	Name=22	NA	rs2817245	0.21	0.21	0.204	0.228834	0.2078	0.1071	0.1614	0.3971	0.1963	0.2	0.1	0.19	0.37	0.208	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.063266	NA	NA	0.161744	0.363141	NA	0.283	NA	5.422456
1110	2	30976058	30976058	C	T	exonic	CAPN13	NA	synonymous SNV	CAPN13:NM_144575:exon10:c.G948A:p.S316S	exonic	ENSG00000162949	NA	synonymous SNV	ENSG00000162949:ENST00000295055:exon10:c.G948A:p.S316S,ENSG00000162949:ENST00000534090:exon10:c.G948A:p.S316S,ENSG00000162949:ENST00000458085:exon11:c.G948A:p.S316S	Score=431;Name=lod=75	NA	2p23.1	NA	NA	NA	NA	rs2926304	0.39	0.39	0.373	0.383786	0.4085	0.5109	0.4928	0.1475	0.4693	0.42	0.52	0.46	0.16	0.4356	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.34843	NA	NA	0.400655	0.173097	ID=COSM148826;OCCURENCE=1(stomach)	0.399	NA	5.4219116
1110	20	1688844	1688844	T	C	intergenic	SIRPG,LOC100289473	dist=50419;dist=65167	NA	NA	ncRNA_exonic	ENSG00000223750	NA	NA	NA	NA	NA	20p13	NA	Name=GATA-1,GATA2_(CG2-96)	Name=10	NA	rs513201	0.5	0.5	0.471	0.490815	0.5785	0.3681	0.6455	0.4675	0.4489	0.57	0.39	0.6	0.44	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.317813	NA	NA	NA	NA	NA	0.572	NA	5.4215
1110	22	20891259	20891259	C	A	intronic	MED15	NA	NA	NA	intronic	ENSG00000099917	NA	NA	NA	NA	NA	22q11.21	NA	Name=p300,NRSF	Name=5	NA	rs2269830	0.5	0.5	0.465	0.507188	0.5785	0.4345	0.7075	0.3646	0.5593	0.56	0.41	0.67	0.38	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.109164	NA	NA	NA	NA	NA	0.536	NA	5.4215
1110	1	150484004	150484004	G	A	exonic	ECM1	NA	synonymous SNV	ECM1:NM_001202858:exon7:c.G861A:p.T287T,ECM1:NM_004425:exon7:c.G780A:p.T260T	exonic	ENSG00000143369	NA	synonymous SNV	ENSG00000143369:ENST00000369047:exon7:c.G780A:p.T260T,ENSG00000143369:ENST00000369049:exon7:c.G861A:p.T287T	NA	NA	1q21.3	NA	NA	NA	NA	rs11801190	0.1	0.1	0.106	0.0994409	0.0716	0.001	0.0548	0.2761	0.0225	0.08	0.0017	0.05	0.27	0.0849	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.136207	NA	NA	0.088953	0.222651	NA	0.101	NA	5.4212136
1110	1	161654948	161654948	T	C	ncRNA_exonic	RPL31P11	NA	NA	NA	ncRNA_exonic	ENSG00000213075	NA	NA	NA	Score=719;Name=lod=1112	NA	1q23.3	NA	NA	NA	NA	rs6686673	0.13	0.13	0.109	0.108826	0.2455	0.0605	0.1254	0.0091	0.1411	0.25	0.07	0.12	0.02	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.064801	NA	NA	NA	NA	NA	0.109	NA	5.4211666
1110	15	78215244	78215244	G	C	ncRNA_intronic	LOC645752	NA	NA	NA	ncRNA_intronic	ENSG00000260776	NA	NA	NA	Score=578;Name=lod=297	NA	15q24.3	NA	NA	NA	NA	rs28754523	0.14	0.14	0.107	0.112021	0.2455	0.0526	0.1023	0.0598	0.1135	0.25	0.06	0.11	0.09	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.878476	NA	NA	NA	NA	NA	0.101	NA	5.4211666
1110	11	133805585	133805585	C	T	exonic	IGSF9B	NA	synonymous SNV	IGSF9B:NM_001277285:exon7:c.G894A:p.S298S	exonic	ENSG00000080854	NA	synonymous SNV	ENSG00000080854:ENST00000321016:exon7:c.G894A:p.S298S,ENSG00000080854:ENST00000533871:exon7:c.G894A:p.S298S	NA	NA	11q25	NA	NA	NA	Score=70;Name=489583_0_+_70	rs329637	0.34	0.34	0.318	0.299121	0.4334	0.3284	0.33	0.143	0.32	0.43	0.35	0.37	0.17	0.3992	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.229414	NA	NA	0.413116	0.197697	ID=COSM428723;OCCURENCE=1(breast)	0.232	NA	5.4209506
1110	20	47273543	47273543	G	C	intronic	PREX1	NA	NA	NA	intronic	ENSG00000124126	NA	NA	NA	NA	NA	20q13.13	NA	Name=CTCF,Rad21,SMC3_(ab9263),CTCF_(SC-5916)	Name=19	NA	rs7271528	0.17	0.17	0.12	0.172923	0.1839	0.2054	0.2608	0.034	0.2536	0.18	0.22	0.26	0.03	0.2276	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.083534	NA	NA	0.167875	0.071888	NA	0.13	NA	5.420625
1110	1	238090257	238090257	A	G	ncRNA_exonic	LOC100130331	NA	NA	NA	ncRNA_exonic	ENSG00000237250,ENSG00000243781	NA	NA	NA	Score=812;Name=lod=2667	NA	1q43	NA	NA	NA	NA	rs548164	0.41	0.41	0.426	0.458466	0.2465	0.4355	0.3156	0.7519	0.4049	0.23	0.43	0.33	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.743188	NA	NA	NA	NA	NA	0.42	NA	5.4201666
1110	1	238090514	238090514	T	A	ncRNA_exonic	LOC100130331	NA	NA	NA	ncRNA_exonic	ENSG00000237250,ENSG00000243781	NA	NA	NA	Score=812;Name=lod=2667	NA	1q43	NA	NA	NA	NA	rs545540	0.41	0.41	0.397	0.452276	0.2465	0.4355	0.3141	0.7292	0.4049	0.23	0.43	0.33	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.637326	NA	NA	NA	NA	NA	0.413	NA	5.4201666
1110	1	238090615	238090615	T	C	ncRNA_exonic	LOC100130331	NA	NA	NA	ncRNA_exonic	ENSG00000237250,ENSG00000243781	NA	NA	NA	Score=812;Name=lod=2667	NA	1q43	NA	NA	NA	NA	rs2790341	NA	NA	0.24	0.452276	0.2465	0.4355	0.3141	0.7292	0.4049	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.974712	NA	NA	NA	NA	NA	NA	NA	5.4201666
1110	2	219508988	219508988	T	C	exonic	ZNF142	NA	nonsynonymous SNV	ZNF142:NM_001105537:exon8:c.A2251G:p.S751G	exonic	ENSG00000115568	NA	nonsynonymous SNV	ENSG00000115568:ENST00000411696:exon7:c.A2251G:p.S751G,ENSG00000115568:ENST00000449707:exon8:c.A2251G:p.S751G	NA	NA	2q35	NA	NA	NA	NA	rs3770214	0.75	0.75	0.735	0.764776	0.6223	0.9425	0.6614	0.8139	0.7352	0.63	0.94	0.68	0.76	0.6711	0.94	0.63	T	0.0	B	0.0	B	0.767	N	1.000	P	-0.695	N	2.83	T	-1.051	T	0.000	T	0.006	-1.543	0.015	1.43	-0.103	0.037	5.841	-1.542824	NA	0.48	0.62	0.798158	NA	0.63	NA	5.4199334
1110	4	110737389	110737389	T	C	exonic	GAR1	NA	synonymous SNV	GAR1:NM_018983:exon2:c.T69C:p.G23G,GAR1:NM_032993:exon2:c.T69C:p.G23G	exonic	ENSG00000109534	NA	synonymous SNV	ENSG00000109534:ENST00000226796:exon2:c.T69C:p.G23G,ENSG00000109534:ENST00000394631:exon2:c.T69C:p.G23G	Score=588;Name=lod=327	NA	4q25	NA	Name=E2F6_(H-50),ELF1_(SC-631)	NA	NA	rs2276326	0.76	0.76	0.735	0.771166	0.7505	0.9157	0.585	0.7292	0.8323	0.74	0.91	0.6	0.71	0.7539	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.605097	NA	NA	0.742674	0.708125	ID=COSM1131305;OCCURENCE=1(prostate)	0.688	NA	5.4195926
1110	6	11723409	11723409	G	A	intronic	ADTRP	NA	NA	NA	intronic	ENSG00000111863	NA	NA	NA	NA	NA	6p24.1	NA	Name=TAF1,MEF2A	Name=5	NA	rs926364	0.42	0.42	0.403	0.389377	0.5815	0.2837	0.5879	0.1959	0.4213	0.57	0.3	0.57	0.22	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.646922	NA	NA	NA	NA	NA	0.355	NA	5.4185
1110	8	48504629	48504629	G	C	intronic	KIAA0146	NA	NA	NA	intronic	ENSG00000164808	NA	NA	NA	Score=621;Name=lod=445	NA	8q11.21	NA	NA	Name=9	NA	rs10958058	0.48	0.48	0.439	0.382987	0.5815	0.6319	0.4885	0.0696	0.271	0.58	0.67	0.47	0.1	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.830308	2.830308	NA	NA	NA	NA	0.478	NA	5.4185
1110	6	35755658	35755658	A	G	exonic	CLPSL1	NA	synonymous SNV	CLPSL1:NM_001010886:exon3:c.A237G:p.Q79Q	exonic	ENSG00000204140	NA	synonymous SNV	ENSG00000204140:ENST00000373861:exon3:c.A237G:p.Q79Q,ENSG00000204140:ENST00000542261:exon3:c.A234G:p.Q78Q	NA	NA	6p21.31	NA	Name=HNF4G_(SC-6558),HNF4A_(H-171)	NA	NA	rs12211728	0.36	0.36	0.333	0.364816	0.4324	0.2649	0.3847	0.3298	0.4315	0.43	0.24	0.39	0.37	0.4016	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.604051	NA	NA	0.414602	0.313235	NA	0.341	NA	5.4180646
1110	2	228197238	228197238	G	A	exonic	MFF	NA	synonymous SNV	MFF:NM_001277066:exon3:c.G285A:p.T95T,MFF:NM_001277068:exon3:c.G285A:p.T95T,MFF:NM_001277062:exon4:c.G285A:p.T95T,MFF:NM_001277063:exon4:c.G285A:p.T95T,MFF:NM_001277064:exon4:c.G285A:p.T95T,MFF:NM_001277065:exon4:c.G285A:p.T95T,MFF:NM_001277067:exon4:c.G135A:p.T45T,MFF:NM_001277061:exon5:c.G363A:p.T121T,MFF:NM_020194:exon5:c.G363A:p.T121T	exonic	ENSG00000168958	NA	synonymous SNV	ENSG00000168958:ENST00000409565:exon3:c.G285A:p.T95T,ENSG00000168958:ENST00000452930:exon3:c.G285A:p.T95T,ENSG00000168958:ENST00000304593:exon4:c.G285A:p.T95T,ENSG00000168958:ENST00000337110:exon4:c.G285A:p.T95T,ENSG00000168958:ENST00000349901:exon4:c.G285A:p.T95T,ENSG00000168958:ENST00000354503:exon4:c.G285A:p.T95T,ENSG00000168958:ENST00000353339:exon5:c.G363A:p.T121T,ENSG00000168958:ENST00000392059:exon5:c.G363A:p.T121T,ENSG00000168958:ENST00000409616:exon5:c.G285A:p.T95T	NA	NA	2q36.3	NA	NA	NA	NA	rs11557342	0.07	0.07	0.06	0.0890575	0.0716	0.1022	0.1081	0.0741	0.1002	0.07	0.07	0.11	0.06	0.09	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.622858	NA	NA	0.087093	0.074444	ID=COSM149078;OCCURENCE=1(stomach)	0.051	NA	5.4179736
1110	16	8868776	8868776	C	A	exonic	ABAT	NA	synonymous SNV	ABAT:NM_000663:exon13:c.C984A:p.V328V,ABAT:NM_001127448:exon13:c.C984A:p.V328V,ABAT:NM_020686:exon13:c.C984A:p.V328V	exonic	ENSG00000183044	NA	synonymous SNV	ENSG00000183044:ENST00000268251:exon13:c.C984A:p.V328V,ENSG00000183044:ENST00000396600:exon13:c.C984A:p.V328V,ENSG00000183044:ENST00000425191:exon13:c.C984A:p.V328V,ENSG00000183044:ENST00000567812:exon13:c.C1029A:p.V343V,ENSG00000183044:ENST00000569156:exon13:c.C984A:p.V328V	Score=557;Name=lod=245	NA	16p13.2	NA	NA	NA	NA	rs1641022	0.34	0.34	0.296	0.317492	0.4374	0.4167	0.3429	0.0552	0.4284	0.42	0.43	0.36	0.08	0.3856	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.222843	NA	NA	0.425698	0.120847	NA	0.254	NA	5.4179686
1110	10	125521590	125521590	G	A	exonic	CPXM2	NA	synonymous SNV	CPXM2:NM_198148:exon11:c.C1575T:p.Y525Y	exonic	ENSG00000121898	NA	synonymous SNV	ENSG00000121898:ENST00000241305:exon11:c.C1575T:p.Y525Y	Score=469;Name=lod=107	NA	10q26.13	Score=753;Name=V$PPARA_01	NA	NA	NA	rs10794567	0.67	0.67	0.638	0.64996	0.7744	0.5665	0.7435	0.6112	0.5941	0.78	0.55	0.74	0.59	0.7217	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.148787	NA	NA	0.752907	0.626192	NA	0.638	NA	5.4176596
1110	1	112106342	112106342	C	T	intronic	ADORA3	NA	NA	NA	intronic	ENSG00000116473,ENSG00000121933	NA	NA	NA	NA	NA	1p13.2	NA	Name=eGFP-JunD,c-Fos,eGFP-JunB,p300,eGFP-FOS	Name=88	NA	rs1591711	0.53	0.53	0.51	0.530152	0.5825	0.5615	0.5908	0.3722	0.6145	0.58	0.56	0.58	0.39	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.300961	2.300961	NA	NA	NA	NA	0.514	NA	5.4175
1110	8	144239859	144239859	A	G	exonic	LY6H	NA	synonymous SNV	LY6H:NM_001135655:exon4:c.T294C:p.C98C,LY6H:NM_002347:exon4:c.T231C:p.C77C,LY6H:NM_001130478:exon5:c.T294C:p.C98C	exonic	ENSG00000176956	NA	synonymous SNV	ENSG00000176956:ENST00000342752:exon4:c.T294C:p.C98C,ENSG00000176956:ENST00000430474:exon4:c.T231C:p.C77C,ENSG00000176956:ENST00000414417:exon5:c.T294C:p.C98C	NA	NA	8q24.3	Score=809;Name=V$CEBP_C	NA	NA	NA	rs10109061	0.45	0.45	0.445	0.438099	0.4036	0.2827	0.3343	0.7156	0.3323	0.4	0.3	0.37	0.74	0.4095	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.744723	NA	NA	0.436744	0.6532	ID=COSM150558;OCCURENCE=1(stomach)	0.58	NA	5.4168226
1110	1	179533915	179533915	G	A	exonic	NPHS2	NA	synonymous SNV	NPHS2:NM_014625:exon2:c.C288T:p.S96S	exonic	ENSG00000116218	NA	synonymous SNV	ENSG00000116218:ENST00000367615:exon2:c.C288T:p.S96S,ENSG00000116218:ENST00000367616:exon2:c.C288T:p.S96S	NA	NA	1q25.2	NA	NA	NA	NA	rs3738423	0.08	0.08	0.069	0.0710863	0.0865	0.0952	0.0519	0.0938	0.0133	0.09	0.08	0.05	0.08	0.0745	0.098	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.553966	NA	NA	0.089419	0.08897	NA	0.08	NA	5.4162476
1110	8	6735431	6735431	C	T	UTR5	DEFB1	NM_005218:c.-52G>A	NA	NA	ncRNA_UTR5	ENSG00000164825	NA	NA	NA	NA	NA	8p23.1	NA	Name=Max,GTF2F1_(RAP-74),CEBPB,Mxi1_(bHLH),AP-2gamma,TBP,p300_(N-15),STAT3	Name=30	NA	rs1799946	0.42	0.42	0.44	0.446286	0.3569	0.4712	0.2968	0.5877	0.4274	0.35	0.47	0.35	0.52	0.3703	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.594256	NA	NA	0.356864	0.553504	NA	0.377	NA	5.415936
1110	6	37514461	37514461	T	C	intergenic	CCDC167,MIR4462	dist=46761;dist=8680	NA	NA	ncRNA_exonic	ENSG00000229559	NA	NA	NA	Score=630;Name=lod=483	NA	6p21.2	NA	NA	Name=2	NA	rs9296225	0.62	0.62	0.609	0.608826	0.5845	0.751	0.4409	0.7171	0.4601	0.57	0.73	0.43	0.69	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.075358	NA	NA	NA	NA	NA	0.587	NA	5.4155
1110	19	36584904	36584904	C	T	intronic	WDR62	NA	NA	NA	intronic	ENSG00000075702	NA	NA	NA	Score=259;Name=lod=15	NA	19q13.12	NA	NA	Name=5	NA	rs2301737	0.14	0.14	0.124	0.125	0.1948	0.1726	0.1311	0.0121	0.1524	0.19	0.18	0.15	0.02	0.1789	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.228923	NA	NA	0.210814	0.044258	ID=COSN165793;OCCURENCE=1(breast)	0.232	NA	5.415486
1110	6	56297568	56297568	G	A	ncRNA_intronic	RNU6-71P	NA	NA	NA	ncRNA_exonic	ENSG00000220666	NA	NA	NA	Score=811;Name=lod=2624	NA	6p12.1	NA	NA	NA	NA	rs6911502	0.21	0.21	0.2	0.217452	0.2515	0.255	0.2392	0.0734	0.3231	0.24	0.24	0.27	0.07	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.261096	NA	NA	NA	NA	NA	0.254	NA	5.4151666
1111	17	79409710	79409710	G	A	exonic	BAHCC1	NA	unknown	UNKNOWN	exonic	ENSG00000171282	NA	synonymous SNV	ENSG00000171282:ENST00000307745:exon9:c.G1335A:p.K445K	Score=369;Name=lod=42	NA	17q25.3	NA	NA	NA	NA	rs12943867	0.21	0.21	0.175	0.179712	0.336	0.004	0.1988	0.2307	0.1176	0.34	NA	0.27	0.2	0.2704	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.763385	NA	NA	0.311954	0.251027	ID=COSM437776;OCCURENCE=2(breast)	0.159	NA	5.4149793
1111	3	98503683	98503683	C	T	intronic	ST3GAL6	NA	NA	NA	intronic	ENSG00000064225	NA	NA	NA	NA	NA	3q12.1	NA	Name=STAT3	Name=45	NA	rs704585	0.62	0.62	0.597	0.603834	0.5855	0.7768	0.6354	0.4198	0.6708	0.57	0.81	0.65	0.46	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.127606	NA	NA	NA	NA	NA	0.616	NA	5.4145
1111	17	39742492	39742492	G	C	intronic	KRT14	NA	NA	NA	intronic	ENSG00000186847	NA	NA	NA	NA	NA	17q21.2	NA	Name=Pol2(b)	Name=3	NA	rs9915113	0.67	0.67	0.647	0.680711	0.5855	0.9425	0.7248	0.4788	0.7505	0.58	0.95	0.69	0.48	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.48119	NA	NA	NA	NA	NA	0.616	NA	5.4145
1111	19	8322069	8322069	A	G	intronic	CERS4	NA	NA	NA	intronic	ENSG00000090661	NA	NA	NA	NA	NA	19p13.2	NA	Name=ELF1_(SC-631),Egr-1	Name=17	NA	rs36249	0.68	0.68	0.633	0.703674	0.5855	0.6508	0.6916	0.7973	0.7618	0.59	0.68	0.67	0.8	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.084667	NA	NA	NA	NA	NA	0.739	NA	5.4145
1111	19	41903671	41903671	A	G	upstream	BCKDHA,EXOSC5	NA	NA	NA	UTR5	ENSG00000248098	ENST00000269980:c.-62A>G	NA	NA	NA	NA	19q13.2	NA	Name=POU2F2,GATA-1,TAF1,YY1_(C-20),NRSF,Pol2,Pol2(phosphoS2),Oct-2,Pol2(b),AP-2alpha,Sin3Ak-20,Pol2-4H8,KAP1,YY1,c-Myc,HEY1,TBP	Name=30	NA	rs892044	0.56	0.56	0.579	0.572883	0.5855	0.4286	0.4669	0.7095	0.5992	0.56	0.47	0.53	0.67	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.687122	1.687122	NA	NA	NA	NA	0.659	NA	5.4145
1111	3	111719786	111719786	A	T	exonic	TAGLN3	NA	synonymous SNV	TAGLN3:NM_001008273:exon2:c.A348T:p.L116L,TAGLN3:NM_001008272:exon3:c.A348T:p.L116L,TAGLN3:NM_013259:exon3:c.A348T:p.L116L	exonic	ENSG00000144834	NA	synonymous SNV	ENSG00000144834:ENST00000469385:exon1:c.A168T:p.L56L,ENSG00000144834:ENST00000455401:exon2:c.A348T:p.L116L,ENSG00000144834:ENST00000486460:exon2:c.A96T:p.L32L,ENSG00000144834:ENST00000273368:exon3:c.A348T:p.L116L,ENSG00000144834:ENST00000393917:exon3:c.A348T:p.L116L,ENSG00000144834:ENST00000478951:exon3:c.A348T:p.L116L	NA	NA	3q13.2	NA	NA	NA	NA	rs2292583	0.12	0.12	0.093	0.132188	0.0716	0.3026	0.1643	0.0129	0.1575	0.07	0.27	0.13	0.02	0.1023	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.73788	NA	NA	0.078605	0.03064	NA	0.08	NA	5.4141616
1111	19	4512613	4512613	T	G	exonic	PLIN4	NA	synonymous SNV	PLIN4:NM_001080400:exon3:c.A1317C:p.T439T	exonic	ENSG00000167676	NA	synonymous SNV	ENSG00000167676:ENST00000301286:exon3:c.A1317C:p.T439T	NA	NA	19p13.3	NA	NA	NA	NA	rs74327986	0.08	0.08	0.065	0.108626	0.1004	0.001	0.0865	0.261	0.0378	0.08	0.0017	0.05	0.18	0.0762	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.087104	NA	NA	0.076279	0.170039	NA	0.08	NA	5.4137876
1111	5	1593246	1593246	C	T	ncRNA_exonic	SDHAP3	NA	NA	NA	ncRNA_exonic	ENSG00000185986	NA	NA	NA	Score=596;Name=lod=352	NA	5p15.33	NA	NA	NA	NA	rs6869310	0.09	0.09	0.067	0.122404	0.1292	0.0069	0.1037	0.2511	0.0736	0.09	0.0017	0.11	0.17	0.1237	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.043504	NA	0.61	NA	NA	NA	0.022	NA	5.4137666
1111	1	11907603	11907603	G	A	ncRNA_exonic	NPPA-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000242349	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs5064	0.1	0.1	0.102	0.129593	0.0765	0.0079	0.0836	0.3185	0.0869	0.07	0.01	0.08	0.27	0.0894	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.208232	NA	NA	0.087674	0.287108	NA	0.152	CLINSIG=non-pathogenic;CLNDBN=Cardiac_arrhythmia;CLNREVSTAT=single;CLNACC=RCV000030342.1;CLNDSDB=MedGen:OMIM;CLNDSDBID=C0003811:115000	5.4130926
1111	19	4511365	4511365	C	G	exonic	PLIN4	NA	synonymous SNV	PLIN4:NM_001080400:exon3:c.G2565C:p.V855V	exonic	ENSG00000167676	NA	synonymous SNV	ENSG00000167676:ENST00000301286:exon3:c.G2565C:p.V855V	NA	NA	19p13.3	NA	NA	NA	NA	rs116973517	0.06	0.06	0.048	0.0457268	0.0954	0.001	0.0692	0.0522	0.0153	0.1	0.0017	0.08	0.04	0.0664	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.142295	NA	NA	0.092073	0.047963	NA	0.029	NA	5.4127936
1111	17	61559923	61559923	C	T	exonic	ACE	NA	synonymous SNV	ACE:NM_000789:exon8:c.C1215T:p.P405P	exonic	ENSG00000159640	NA	synonymous SNV	ENSG00000159640:ENST00000290866:exon8:c.C1215T:p.P405P,ENSG00000159640:ENST00000428043:exon8:c.C1215T:p.P405P,ENSG00000159640:ENST00000538928:exon8:c.C1215T:p.P405P	NA	NA	17q23.3	NA	Name=c-Myc	NA	NA	rs4309	0.42	0.42	0.376	0.423522	0.3877	0.6468	0.5519	0.1104	0.5624	0.38	0.66	0.52	0.13	0.4492	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.173365	NA	NA	0.417093	0.176804	NA	0.406	NA	5.4126736
1111	17	2929392	2929392	G	A	exonic	RAP1GAP2	NA	synonymous SNV	RAP1GAP2:NM_001100398:exon19:c.G1797A:p.P599P,RAP1GAP2:NM_015085:exon20:c.G1842A:p.P614P	exonic	ENSG00000132359	NA	synonymous SNV	ENSG00000132359:ENST00000366401:exon19:c.G1797A:p.P599P,ENSG00000132359:ENST00000254695:exon20:c.G1842A:p.P614P,ENSG00000132359:ENST00000540393:exon20:c.G1785A:p.P595P,ENSG00000132359:ENST00000542807:exon20:c.G1842A:p.P614P	Score=610;Name=lod=401	NA	17p13.3	NA	NA	NA	NA	rs55904912	0.43	0.43	0.401	0.428514	0.4066	0.5466	0.4986	0.2451	0.5276	0.44	0.56	0.5	0.24	0.4395	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.463403	1.463403	NA	0.408493	0.267292	ID=COSM148146;OCCURENCE=1(stomach)	0.478	NA	5.4120736
1111	2	10059770	10059770	G	T	exonic	TAF1B	NA	nonsynonymous SNV	TAF1B:NM_005680:exon14:c.G1386T:p.E462D	exonic	ENSG00000115750	NA	nonsynonymous SNV	ENSG00000115750:ENST00000263663:exon14:c.G1386T:p.E462D,ENSG00000115750:ENST00000396242:exon14:c.G621T:p.E207D	NA	NA	2p25.1	NA	NA	NA	NA	rs1820965	0.49	0.49	0.466	0.441494	0.667	0.4792	0.5389	0.1309	0.5215	0.65	0.51	0.57	0.15	0.5827	0.67	.	.	0.0	B	0.0	B	0.324	N	1.000	P	-1.7	N	1.13	T	-0.965	T	0.000	T	0.034	-1.277	0.043	1.66	0.107	0.470	1.416	-1.277245	NA	0.9	0.671628	0.210168	NA	0.529	NA	5.4120054
1111	5	1593266	1593266	T	C	ncRNA_exonic	SDHAP3	NA	NA	NA	ncRNA_exonic	ENSG00000185986	NA	NA	NA	Score=596;Name=lod=352	NA	5p15.33	NA	NA	NA	NA	rs6898538	0.1	0.1	0.064	0.123403	0.1302	0.0069	0.1037	0.2542	0.0736	0.1	0.0017	0.12	0.19	0.1249	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.519126	NA	1	NA	NA	NA	0.022	NA	5.4115666
1111	21	42817582	42817582	A	G	intronic	MX1	NA	NA	NA	intronic	ENSG00000157601	NA	NA	NA	NA	NA	21q22.3	NA	Name=Pol2-4H8,Pol2	Name=6	NA	rs469288	0.46	0.46	0.421	0.477037	0.5885	0.3482	0.4683	0.4433	0.547	0.56	0.3	0.49	0.44	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.441927	NA	NA	NA	NA	NA	0.507	NA	5.4115
1111	10	44284687	44284687	C	T	ncRNA_exonic	HNRNPA3P1	NA	NA	NA	ncRNA_exonic	ENSG00000226790	NA	NA	NA	Score=768;Name=lod=1762	NA	10q11.21	NA	NA	NA	NA	rs10793494	0.39	0.39	0.334	0.366414	0.2555	0.6022	0.3357	0.3563	0.273	0.26	0.6	0.34	0.37	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.679358	NA	NA	NA	NA	NA	0.29	NA	5.4111666
1111	11	118873987	118873987	T	C	ncRNA_exonic	RPL23AP64	NA	NA	NA	ncRNA_exonic	ENSG00000240970	NA	NA	NA	Score=687;Name=lod=828	NA	11q23.3	NA	NA	NA	NA	rs9645664	0.22	0.22	0.225	0.255591	0.2555	0.0694	0.232	0.3555	0.3292	0.24	0.05	0.24	0.36	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.100699	NA	NA	NA	NA	NA	0.304	NA	5.4111666
1111	8	24256470	24256470	C	T	exonic	ADAMDEC1	NA	synonymous SNV	ADAMDEC1:NM_001145272:exon8:c.C609T:p.S203S,ADAMDEC1:NM_014479:exon9:c.C846T:p.S282S,ADAMDEC1:NM_001145271:exon10:c.C609T:p.S203S	exonic	ENSG00000134028	NA	synonymous SNV	ENSG00000134028:ENST00000522298:exon8:c.C609T:p.S203S,ENSG00000134028:ENST00000256412:exon9:c.C846T:p.S282S,ENSG00000134028:ENST00000538205:exon10:c.C609T:p.S203S	NA	NA	8p21.2	NA	NA	Name=2	NA	rs2291577	0.29	0.29	0.263	0.292931	0.4235	0.2034	0.4539	0.0968	0.4018	0.43	0.21	0.42	0.09	0.3924	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.155165	NA	NA	0.439884	0.152973	NA	0.217	NA	5.4108826
1111	19	20011811	20011811	T	C	UTR5	ZNF93	NM_031218:c.-87T>C	NA	NA	ncRNA_exonic	ENSG00000267268	NA	NA	NA	NA	NA	19p12	NA	Name=YY1,Pol2-4H8,Pol2(b),TBP,HEY1,Pol2,E2F6,TAF7_(SQ-8),NF-YA,TAF1,E2F6_(H-50),E2F4,GTF2F1_(RAP-74),CHD2_(N-1250),NF-YB	NA	NA	rs7253941	0.21	0.21	0.217	0.240216	0.0467	0.1895	0.1974	0.5628	0.0859	0.04	0.17	0.18	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.290576	NA	NA	0.042426	0.520954	NA	0.261	NA	5.410874
1111	2	37872871	37872871	C	T	UTR3	CDC42EP3	NM_006449:c.*95G>A,NM_001270438:c.*95G>A,NM_001270437:c.*95G>A,NM_001270436:c.*95G>A	NA	NA	ncRNA_UTR3	ENSG00000163171	NA	NA	NA	NA	NA	2p22.2	NA	Name=c-Jun,c-Fos	NA	NA	rs15628	0.07	0.07	0.056	0.0804712	0.0895	0.0952	0.0764	0.0182	0.1431	0.08	0.09	0.08	0.01	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.054414	NA	NA	NA	NA	NA	0.051	NA	5.4105
1111	12	56117570	56117570	C	T	ncRNA_intronic	BLOC1S1-RDH5	NA	NA	NA	UTR3	ENSG00000258311	ENST00000550412:c.*2080C>T	NA	NA	NA	NA	12q13.2	NA	NA	Name=5	NA	rs3138136	0.04	0.04	0.038	0.0389377	0.0895	NA	0.0548	0.0045	0.0624	0.08	NA	0.05	0.01	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.6111	1.6111	NA	NA	NA	NA	0.036	NA	5.4105
1111	17	76198587	76198587	A	G	exonic	AFMID	NA	synonymous SNV	AFMID:NM_001010982:exon3:c.A162G:p.T54T,AFMID:NM_001145526:exon3:c.A162G:p.T54T	exonic	ENSG00000183077	NA	synonymous SNV	ENSG00000183077:ENST00000327898:exon3:c.A162G:p.T54T,ENSG00000183077:ENST00000409257:exon3:c.A162G:p.T54T,ENSG00000183077:ENST00000586542:exon3:c.A162G:p.T54T,ENSG00000183077:ENST00000588199:exon3:c.A162G:p.T54T,ENSG00000183077:ENST00000591256:exon3:c.A162G:p.T54T	NA	NA	17q25.3	NA	NA	NA	NA	rs72897838	0.07	0.07	0.074	0.0599042	0.0845	0.001	0.062	0.0802	0.0665	0.09	0.0017	0.09	0.08	0.0728	0.099	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.031716	NA	NA	0.099419	0.086473	NA	NA	NA	5.4099476
1111	17	79268562	79268562	A	G	intronic	SLC38A10	NA	NA	NA	intronic	ENSG00000157637	NA	NA	NA	NA	NA	17q25.3	NA	Name=TAF1,E2F6_(H-50),Pol2,Egr-1,ZBTB7A_(SC-34508)	Name=22	NA	rs8064597	0.57	0.57	0.572	0.567093	0.5905	0.3175	0.5259	0.9198	0.3528	0.58	0.31	0.52	0.91	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.082857	NA	NA	NA	NA	NA	0.717	NA	5.4095
1111	6	128040839	128040839	T	C	exonic	THEMIS	NA	nonsynonymous SNV	THEMIS:NM_001010923:exon5:c.A1888G:p.I630V,THEMIS:NM_001164687:exon5:c.A1783G:p.I595V,THEMIS:NM_001164685:exon6:c.A2005G:p.I669V	exonic	ENSG00000172673	NA	nonsynonymous SNV	ENSG00000172673:ENST00000368248:exon5:c.A1888G:p.I630V,ENSG00000172673:ENST00000537166:exon5:c.A1783G:p.I595V,ENSG00000172673:ENST00000368250:exon6:c.A1651G:p.I551V,ENSG00000172673:ENST00000543064:exon6:c.A2005G:p.I669V	NA	NA	6q22.33	NA	NA	NA	NA	rs675531	0.5	0.5	0.528	0.457867	0.6789	0.1081	0.4035	0.705	0.2955	0.68	0.12	0.45	0.7	0.5627	0.7	1	T	0.0	B	0.0	B	0.032	N	1.000	P	-0.69	N	2.29	T	-1.018	T	0.004	T	0.048	-2.289	0.004	-0.674	-0.265	-0.546	0.673	-2.289485	NA	1	0.682442	0.701316	ID=COSM150180;OCCURENCE=1(stomach)	0.594	NA	5.4092914
1111	20	34535373	34535373	T	C	intronic	PHF20	NA	NA	NA	intronic	ENSG00000025293	NA	NA	NA	NA	NA	20q11.23	NA	Name=CTCF	Name=62	NA	rs6088971	0.24	0.24	0.253	0.30611	0.1829	0.1855	0.1859	0.4864	0.3988	0.18	0.16	0.23	0.44	0.2253	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.702972	NA	NA	0.182791	0.422379	NA	0.254	NA	5.409009
1111	1	152191051	152191051	G	A	exonic	HRNR	NA	synonymous SNV	HRNR:NM_001009931:exon3:c.C3054T:p.S1018S	exonic	ENSG00000197915	NA	synonymous SNV	ENSG00000197915:ENST00000368801:exon3:c.C3054T:p.S1018S	NA	NA	1q21.3	NA	NA	NA	NA	rs74868796	0.04	0.04	0.023	0.029353	0.0994	NA	0.0461	0.0023	0.0123	0.09	NA	0.07	0.002	0.0695	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.279762	NA	NA	0.088837	0.016114	NA	NA	NA	5.4089296
1111	15	90246336	90246336	A	G	exonic	WDR93	NA	synonymous SNV	WDR93:NM_020212:exon3:c.A459G:p.L153L	exonic	ENSG00000140527	NA	synonymous SNV	ENSG00000140527:ENST00000268130:exon3:c.A459G:p.L153L,ENSG00000140527:ENST00000558000:exon3:c.A459G:p.L153L,ENSG00000140527:ENST00000560294:exon3:c.A459G:p.L153L	Score=419;Name=lod=67	NA	15q26.1	NA	NA	NA	NA	rs16974175	0.36	0.36	0.364	0.392173	0.4016	0.2063	0.3631	0.5061	0.4407	0.4	0.22	0.39	0.44	0.4092	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.126826	NA	NA	0.447546	0.486818	NA	0.522	NA	5.4083206
1111	5	1593326	1593326	G	A	ncRNA_exonic	SDHAP3	NA	NA	NA	ncRNA_exonic	ENSG00000185986	NA	NA	NA	Score=596;Name=lod=352	NA	5p15.33	NA	NA	NA	NA	rs6872202	0.11	0.11	0.096	0.123403	0.1302	0.0069	0.1037	0.2542	0.0736	0.12	0.0017	0.12	0.24	0.1282	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.636185	NA	0	NA	NA	NA	0.123	NA	5.4082666
1111	1	3800242	3800242	A	G	exonic	DFFB	NA	synonymous SNV	DFFB:NM_004402:exon7:c.A954G:p.P318P	exonic	ENSG00000169598	NA	synonymous SNV	ENSG00000169598:ENST00000378209:exon7:c.A954G:p.P318P	NA	NA	1p36.32	NA	NA	Name=2	NA	rs3205087	0.37	0.37	0.376	0.355831	0.4105	0.3482	0.3256	0.3124	0.3875	0.41	0.35	0.37	0.33	0.3971	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.085682	NA	NA	0.451047	0.338402	NA	0.428	NA	5.4080196
1111	4	73956736	73956736	G	A	exonic	ANKRD17	NA	synonymous SNV	ANKRD17:NM_198889:exon28:c.C5856T:p.L1952L,ANKRD17:NM_032217:exon29:c.C6609T:p.L2203L	exonic	ENSG00000132466	NA	synonymous SNV	ENSG00000132466:ENST00000330838:exon28:c.C5856T:p.L1952L,ENSG00000132466:ENST00000358602:exon29:c.C6609T:p.L2203L,ENSG00000132466:ENST00000509867:exon29:c.C6270T:p.L2090L	Score=605;Name=lod=383	NA	4q13.3	NA	NA	NA	NA	rs6855349	0.35	0.35	0.363	0.351837	0.4483	0.3849	0.2968	0.2375	0.4121	0.45	0.35	0.29	0.26	0.3936	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.463892	NA	NA	0.41686	0.276214	NA	0.239	NA	5.4079066
1111	1	1337334	1337334	G	T	ncRNA_exonic	LOC148413	NA	NA	NA	UTR3	ENSG00000224870,ENSG00000242485	ENST00000444362:c.*1363G>T,ENST00000447725:c.*1524G>T;ENST00000344843:c.*129C>A	NA	NA	NA	NA	1p36.33	NA	Name=KAP1	NA	NA	rs1171	0.33	0.33	0.281	0.370807	0.0924	0.869	0.3646	0.1195	0.4877	0.09	0.87	0.27	0.12	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.626283	NA	NA	NA	NA	NA	0.203	NA	5.4076
1111	1	169521849	169521849	T	C	exonic	F5	NA	synonymous SNV	F5:NM_000130:exon8:c.A1242G:p.K414K	exonic	ENSG00000198734	NA	synonymous SNV	ENSG00000198734:ENST00000546081:exon7:c.A831G:p.K277K,ENSG00000198734:ENST00000367796:exon8:c.A1242G:p.K414K,ENSG00000198734:ENST00000367797:exon8:c.A1242G:p.K414K	NA	NA	1q24.2	NA	NA	NA	NA	rs6035	0.07	0.07	0.061	0.0830671	0.0865	0.0714	0.0735	0.0847	0.0961	0.08	0.07	0.06	0.06	0.0862	0.091	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.278814	NA	NA	0.086395	0.090558	NA	0.065	NA	5.4075716
1111	5	150489390	150489390	A	G	exonic	ANXA6	NA	synonymous SNV	ANXA6:NM_001193544:exon21:c.T1512C:p.P504P,ANXA6:NM_001155:exon22:c.T1608C:p.P536P	exonic	ENSG00000197043	NA	synonymous SNV	ENSG00000197043:ENST00000377751:exon10:c.T579C:p.P193P,ENSG00000197043:ENST00000521512:exon15:c.T969C:p.P323P,ENSG00000197043:ENST00000356496:exon21:c.T1590C:p.P530P,ENSG00000197043:ENST00000523714:exon21:c.T1512C:p.P504P,ENSG00000197043:ENST00000354546:exon22:c.T1608C:p.P536P	Score=425;Name=lod=71	NA	5q33.1	Score=841;Name=V$HAND1E47_01	NA	NA	NA	rs1133202	0.76	0.76	0.758	0.758187	0.7555	0.6696	0.7637	0.8404	0.7372	0.76	0.69	0.73	0.84	0.7495	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.370809	NA	NA	0.754952	0.843782	NA	0.819	NA	5.4067146
1111	10	66585513	66585513	A	G	ncRNA_exonic	ANXA2P3	NA	NA	NA	ncRNA_exonic	ENSG00000216740	NA	NA	NA	Score=609;Name=lod=397	NA	10q21.3	NA	NA	NA	NA	rs7898508	0.31	0.31	0.274	0.297923	0.2614	0.4712	0.3141	0.1914	0.2894	0.27	0.5	0.25	0.19	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.18402	NA	NA	NA	NA	NA	0.196	NA	5.4052666
1111	7	31611758	31611758	G	T	exonic	CCDC129	NA	synonymous SNV	CCDC129:NM_194300:exon5:c.G351T:p.G117G,CCDC129:NM_001257968:exon6:c.G429T:p.G143G,CCDC129:NM_001257967:exon7:c.G381T:p.G127G	exonic	ENSG00000180347	NA	synonymous SNV	ENSG00000180347:ENST00000409210:exon4:c.G75T:p.G25G,ENSG00000180347:ENST00000319386:exon6:c.G351T:p.G117G,ENSG00000180347:ENST00000407970:exon6:c.G351T:p.G117G,ENSG00000180347:ENST00000409717:exon6:c.G351T:p.G117G,ENSG00000180347:ENST00000451887:exon6:c.G429T:p.G143G,ENSG00000180347:ENST00000454513:exon6:c.G351T:p.G117G,ENSG00000180347:ENST00000456011:exon6:c.G351T:p.G117G	Score=426;Name=lod=72	NA	7p14.3	NA	NA	NA	NA	rs67930674	0.43	0.43	0.428	0.441094	0.4036	0.3383	0.5101	0.5378	0.4059	0.4	0.37	0.47	0.53	0.4395	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.899475	NA	NA	0.418372	0.515887	NA	0.384	NA	5.4051946
1112	8	27456253	27456253	T	C	intronic	CLU	NA	NA	NA	intronic	ENSG00000120885	NA	NA	NA	NA	Name=Alzheimer's disease	8p21.1	NA	NA	Name=10	NA	rs2279590	0.74	0.74	0.758	0.759385	0.5954	0.7887	0.67	0.9418	0.7147	0.59	0.8	0.66	0.95	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011366	NA	NA	NA	NA	NA	0.688	NA	5.4046
1112	19	49652130	49652130	G	A	intronic	PPFIA3	NA	NA	NA	intronic	ENSG00000177380	NA	NA	NA	NA	NA	19q13.33	NA	Name=JunD,SIX5,SP1,Pol2,p300	Name=9	NA	rs116573491	NA	NA	NA	0.591454	0.5954	0.2411	0.5865	0.8835	0.5573	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.307877	NA	NA	NA	NA	NA	NA	NA	5.4046
1112	10	29822159	29822159	T	C	exonic	SVIL	NA	synonymous SNV	SVIL:NM_021738:exon8:c.A1137G:p.L379L	exonic	ENSG00000197321	NA	synonymous SNV	ENSG00000197321:ENST00000355867:exon8:c.A1137G:p.L379L,ENSG00000197321:ENST00000375398:exon10:c.A1137G:p.L379L	Score=272;Name=lod=17	NA	10p11.23	NA	NA	NA	NA	rs7076239	0.32	0.32	0.304	0.310703	0.4274	0.0823	0.3862	0.3502	0.319	0.43	0.09	0.41	0.36	0.3883	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.776096	NA	NA	0.446395	0.362914	NA	0.326	NA	5.4045716
1112	21	47974582	47974582	A	G	exonic	DIP2A	NA	synonymous SNV	DIP2A:NM_001146114:exon25:c.A3057G:p.T1019T,DIP2A:NM_001146116:exon27:c.A3237G:p.T1079T,DIP2A:NM_015151:exon27:c.A3249G:p.T1083T	exonic	ENSG00000160305	NA	synonymous SNV	ENSG00000160305:ENST00000427143:exon25:c.A3057G:p.T1019T,ENSG00000160305:ENST00000318711:exon27:c.A3252G:p.T1084T,ENSG00000160305:ENST00000400274:exon27:c.A3237G:p.T1079T,ENSG00000160305:ENST00000417564:exon27:c.A3249G:p.T1083T	NA	NA	21q22.3	Score=719;Name=V$HOX13_01	NA	NA	NA	rs1107065	0.33	0.33	0.293	0.331669	0.3986	0.3433	0.389	0.1634	0.4376	0.39	0.34	0.4	0.19	0.4442	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.422003	1.422003	NA	0.419359	0.227993	NA	0.399	NA	5.4045076
1112	3	52556369	52556369	C	T	exonic	STAB1	NA	synonymous SNV	STAB1:NM_015136:exon60:c.C6489T:p.H2163H	exonic	ENSG00000010327	NA	synonymous SNV	ENSG00000010327:ENST00000321725:exon60:c.C6489T:p.H2163H	NA	NA	3p21.1	NA	NA	NA	NA	rs35325270	0.13	0.13	0.133	0.139577	0.0905	0.0228	0.1239	0.3593	0.0245	0.09	0.02	0.12	0.33	0.0905	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.857245	NA	NA	0.081163	0.330458	NA	0.254	NA	5.4045036
1112	18	60985879	60985879	T	C	exonic	BCL2	NA	synonymous SNV	BCL2:NM_000633:exon2:c.A21G:p.T7T,BCL2:NM_000657:exon2:c.A21G:p.T7T	exonic	ENSG00000171791	NA	synonymous SNV	ENSG00000171791:ENST00000398117:exon1:c.A21G:p.T7T,ENSG00000171791:ENST00000589955:exon1:c.A21G:p.T7T,ENSG00000171791:ENST00000333681:exon2:c.A21G:p.T7T,ENSG00000171791:ENST00000444484:exon2:c.A21G:p.T7T	Score=581;Name=lod=306	NA	18q21.33	NA	NA	NA	NA	rs1801018	0.28	0.28	0.239	0.243211	0.4751	0.0923	0.389	0.0318	0.3425	0.5	0.09	0.41	0.04	0.3688	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.218152	NA	NA	0.41845	0.086101	ID=COSM1600002,COSM438304,COSM438303;OCCURENCE=1(breast),1(large_intestine),1(central_nervous_system)	0.254	NA	5.4043166
1112	1	111825226	111825226	C	T	ncRNA_exonic	CHIAP2	NA	NA	NA	ncRNA_exonic	ENSG00000203878	NA	NA	NA	Score=425;Name=lod=71	NA	1p13.2	NA	NA	NA	NA	rs6687390	0.28	0.28	0.309	0.297324	0.2624	0.2282	0.1974	0.3843	0.3579	0.27	0.27	0.2	0.37	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.984195	1.984195	NA	NA	NA	NA	0.261	NA	5.4042666
1112	10	129899629	129899629	G	A	exonic	MKI67	NA	synonymous SNV	MKI67:NM_001145966:exon13:c.C8518T:p.L2840L,MKI67:NM_002417:exon14:c.C9598T:p.L3200L	exonic	ENSG00000148773	NA	synonymous SNV	ENSG00000148773:ENST00000368653:exon13:c.C8518T:p.L2840L,ENSG00000148773:ENST00000368654:exon14:c.C9598T:p.L3200L	NA	NA	10q26.2	NA	NA	NA	NA	rs16912247	0.04	0.04	0.035	0.0399361	0.0944	NA	0.0648	0.0015	0.0593	0.09	0.0017	0.06	0.0041	0.0696	0.099	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.348889	NA	NA	0.098605	0.019065	NA	0.051	NA	5.4040616
1112	18	12351342	12351342	C	T	exonic	AFG3L2	NA	synonymous SNV	AFG3L2:NM_006796:exon11:c.G1389A:p.L463L	exonic	ENSG00000141385	NA	synonymous SNV	ENSG00000141385:ENST00000269143:exon11:c.G1389A:p.L463L	NA	NA	18p11.21	NA	NA	NA	Score=160;Name=1059190_0_-_160	rs11080572	0.63	0.63	0.621	0.623203	0.7614	0.6071	0.5735	0.4387	0.7822	0.77	0.62	0.6	0.48	0.7205	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.229711	NA	NA	0.780814	0.501362	ID=COSM148399;OCCURENCE=1(stomach)	0.572	CLINSIG=probable-non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000116248.2|RCV000123556.1;CLNDSDB=.|.;CLNDSDBID=.|.	5.4039526
1112	4	16025837	16025837	C	T	intronic	PROM1	NA	NA	NA	intronic	ENSG00000007062	NA	NA	NA	NA	NA	4p15.32	NA	Name=STAT3,GR	Name=44	NA	rs17478336	0.34	0.34	0.32	0.301917	0.5964	0.1815	0.366	0.0499	0.4182	0.61	0.19	0.38	0.05	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.054149	NA	NA	NA	NA	NA	0.341	NA	5.4036
1112	16	30518096	30518096	C	T	exonic	ITGAL	NA	synonymous SNV	ITGAL:NM_001114380:exon19:c.C2175T:p.N725N,ITGAL:NM_002209:exon21:c.C2427T:p.N809N	exonic	ENSG00000005844	NA	synonymous SNV	ENSG00000005844:ENST00000358164:exon19:c.C2175T:p.N725N,ENSG00000005844:ENST00000356798:exon21:c.C2427T:p.N809N	NA	NA	16p11.2	NA	NA	NA	NA	rs2230434	0.04	0.04	0.035	0.0263578	0.0934	0.001	0.0389	0.0061	0.002	0.09	NA	0.06	0.01	0.0634	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.27062	NA	NA	0.106512	0.014565	NA	0.022	NA	5.4033546
1112	19	9408658	9408658	G	A	exonic	ZNF699	NA	synonymous SNV	ZNF699:NM_198535:exon3:c.C184T:p.L62L	exonic	ENSG00000196110	NA	synonymous SNV	ENSG00000196110:ENST00000308650:exon3:c.C184T:p.L62L,ENSG00000196110:ENST00000591998:exon4:c.C184T:p.L62L	NA	NA	19p13.2	NA	NA	NA	NA	rs73920733	0.1	0.1	0.1	0.111621	0.0865	0.0228	0.072	0.2201	0.1104	0.08	0.01	0.08	0.24	0.0898	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.14596	NA	NA	0.087099	0.222603	NA	0.145	NA	5.4032676
1112	15	85177723	85177723	T	G	ncRNA_intronic	SCAND2P	NA	NA	NA	ncRNA_exonic	ENSG00000176700,ENSG00000254779	NA	NA	NA	Score=683;Name=lod=792	NA	15q25.2	NA	NA	NA	NA	rs36126054	0.17	0.17	0.156	0.140775	0.2634	0.1369	0.1859	0.0144	0.1575	0.27	0.15	0.21	0.01	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.524583	1.524583	NA	NA	NA	NA	0.174	NA	5.4032666
1112	4	70079838	70079838	T	C	exonic	UGT2B11	NA	synonymous SNV	UGT2B11:NM_001073:exon1:c.A603G:p.L201L	exonic	ENSG00000213759	NA	synonymous SNV	ENSG00000213759:ENST00000446444:exon1:c.A603G:p.L201L	Score=414;Name=lod=64	NA	4q13.2	NA	NA	NA	NA	rs4694697	0.31	0.31	0.283	0.303514	0.4155	0.2946	0.3804	0.177	0.3139	0.43	0.27	0.35	0.14	0.3983	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.642672	NA	NA	0.449686	0.234907	ID=COSM149684;OCCURENCE=1(stomach)	NA	NA	5.4031806
1112	4	44626641	44626641	A	G	exonic	YIPF7	NA	synonymous SNV	YIPF7:NM_182592:exon5:c.T657C:p.G219G	exonic	ENSG00000177752	NA	synonymous SNV	ENSG00000177752:ENST00000332990:exon5:c.T657C:p.G219G	Score=556;Name=lod=243	NA	4p12	NA	NA	NA	NA	rs60959366	0.52	0.52	0.532	0.551917	0.4095	0.5585	0.4625	0.6884	0.5706	0.4	0.56	0.46	0.7	0.49	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.603811	NA	NA	0.365257	0.61225	NA	0.377	NA	5.4019096
1112	4	57839280	57839280	A	T	intronic	NOA1	NA	NA	NA	intronic	ENSG00000084092	NA	NA	NA	Score=251;Name=lod=14	NA	4q12	NA	Name=SETDB1	NA	NA	rs57265257	0.24	0.24	0.229	0.239417	0.1869	0.381	0.219	0.2088	0.2035	0.19	0.37	0.19	0.2	0.2199	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.984099	3.984099	NA	0.191744	0.192325	NA	0.181	NA	5.401456
1112	6	32784753	32784753	T	C	UTR5	HLA-DOB	NM_002120:c.-25A>G	NA	NA	UTR5	ENSG00000241106	ENST00000438763:c.-25A>G,ENST00000488325:c.-25A>G	NA	NA	NA	NA	6p21.32	NA	Name=Pol2,RFX5_(N-494),TBP	Name=71	NA	rs2071470	0.3	0.3	0.269	0.308906	0.3082	0.3651	0.3487	0.1369	0.456	0.3	0.38	0.34	0.16	0.3328	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.17316	NA	NA	0.290882	0.156954	NA	0.232	NA	5.4014514
1112	17	79244802	79244802	T	C	exonic	SLC38A10	NA	synonymous SNV	SLC38A10:NM_001037984:exon10:c.A1047G:p.T349T,SLC38A10:NM_138570:exon10:c.A1047G:p.T349T	exonic	ENSG00000157637	NA	synonymous SNV	ENSG00000157637:ENST00000288439:exon10:c.A1047G:p.T349T,ENSG00000157637:ENST00000374759:exon10:c.A1047G:p.T349T	Score=444;Name=lod=85	NA	17q25.3	NA	NA	NA	NA	rs2292184	0.43	0.43	0.434	0.429113	0.4414	0.1825	0.4121	0.7837	0.2035	0.43	0.19	0.38	0.75	0.3999	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.067101	NA	NA	0.423953	0.747163	ID=COSM437770,COSM437771;OCCURENCE=1(breast)	0.551	NA	5.4014136
1112	6	29760819	29760819	A	C	ncRNA_exonic	HCG4	NA	NA	NA	ncRNA_exonic	ENSG00000176998,ENSG00000181126	NA	NA	NA	NA	NA	6p22.1	NA	NA	Name=11	NA	rs1610646	0.24	0.24	0.217	0.249601	0.2654	0.1101	0.2637	0.298	0.3016	0.26	0.14	0.24	0.31	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.740302	NA	NA	NA	NA	NA	0.246	NA	5.4012666
1112	14	31354374	31354374	A	T	ncRNA_intronic	LOC100506071	NA	NA	NA	ncRNA_exonic	ENSG00000258525	NA	NA	NA	NA	NA	14q12	NA	Name=GATA-1	NA	NA	rs12881068	0.15	0.15	0.147	0.133387	0.2654	0.0813	0.1354	0.0416	0.1738	0.27	0.05	0.16	0.05	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.330403	NA	NA	NA	NA	NA	0.174	NA	5.4012666
1112	7	44282868	44282868	A	G	exonic	CAMK2B	NA	synonymous SNV	CAMK2B:NM_001220:exon8:c.T582C:p.P194P,CAMK2B:NM_172078:exon8:c.T582C:p.P194P,CAMK2B:NM_172079:exon8:c.T582C:p.P194P,CAMK2B:NM_172080:exon8:c.T582C:p.P194P,CAMK2B:NM_172081:exon8:c.T582C:p.P194P,CAMK2B:NM_172082:exon8:c.T582C:p.P194P,CAMK2B:NM_172083:exon8:c.T582C:p.P194P,CAMK2B:NM_172084:exon8:c.T582C:p.P194P	exonic	ENSG00000058404	NA	synonymous SNV	ENSG00000058404:ENST00000502837:exon6:c.T195C:p.P65P,ENSG00000058404:ENST00000258682:exon8:c.T582C:p.P194P,ENSG00000058404:ENST00000346990:exon8:c.T582C:p.P194P,ENSG00000058404:ENST00000347193:exon8:c.T582C:p.P194P,ENSG00000058404:ENST00000350811:exon8:c.T582C:p.P194P,ENSG00000058404:ENST00000353185:exon8:c.T582C:p.P194P,ENSG00000058404:ENST00000353625:exon8:c.T582C:p.P194P,ENSG00000058404:ENST00000358707:exon8:c.T582C:p.P194P,ENSG00000058404:ENST00000395747:exon8:c.T582C:p.P194P,ENSG00000058404:ENST00000395749:exon8:c.T582C:p.P194P,ENSG00000058404:ENST00000440254:exon8:c.T582C:p.P194P,ENSG00000058404:ENST00000457475:exon8:c.T582C:p.P194P	NA	NA	7p13	Score=748;Name=V$SRF_01	NA	NA	NA	rs11542228	0.33	0.33	0.313	0.335663	0.4245	0.2222	0.317	0.2852	0.4427	0.4	0.24	0.35	0.31	0.3966	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.244261	1.244261	NA	0.444535	0.310259	NA	0.384	NA	5.4010316
1112	3	47292183	47292183	T	C	intronic	KIF9	NA	NA	NA	intronic	ENSG00000088727	NA	NA	NA	NA	NA	3p21.31	NA	Name=CTCF_(SC-5916),PU.1,SMC3_(ab9263),Rad21,ELF1_(SC-631),CTCF	Name=90	NA	rs11130124	0.57	0.57	0.528	0.5627	0.5994	0.5357	0.5562	0.5356	0.5941	0.6	0.53	0.58	0.55	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.233029	NA	NA	NA	NA	NA	0.623	NA	5.4006
1112	4	76722422	76722422	T	C	intronic	USO1	NA	NA	NA	intronic	ENSG00000138768	NA	NA	NA	NA	NA	4q21.1	NA	Name=c-Fos	Name=34	NA	rs13133472	0.59	0.59	0.552	0.544329	0.5994	0.7966	0.6484	0.2602	0.5378	0.61	0.83	0.67	0.25	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.134908	NA	NA	NA	NA	NA	0.514	NA	5.4006
1112	7	37953840	37953840	C	T	exonic	SFRP4	NA	synonymous SNV	SFRP4:NM_003014:exon3:c.G567A:p.T189T	exonic	ENSG00000106483	NA	synonymous SNV	ENSG00000106483:ENST00000436072:exon3:c.G567A:p.T189T,ENSG00000106483:ENST00000447200:exon4:c.G165A:p.T55T	NA	NA	7p14.1	Score=820;Name=V$RFX1_02	NA	NA	NA	rs1132552	0.49	0.49	0.473	0.54393	0.4165	0.6339	0.5461	0.4947	0.6472	0.43	0.62	0.49	0.43	0.4616	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.620783	NA	NA	0.388256	0.473445	NA	0.5	NA	5.4003106
1112	2	102315057	102315057	A	G	intronic	MAP4K4	NA	NA	NA	intronic	ENSG00000071054	NA	NA	NA	NA	NA	2q11.2	NA	Name=HA-E2F1,GATA-2,GATA-1	Name=95	NA	rs1567385	0.23	0.23	0.193	0.191294	0.2863	0.2272	0.3069	0.0514	0.1636	0.3	0.26	0.3	0.06	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.1575	NA	NA	0.313639	0.092486	ID=COSN166228;OCCURENCE=1(NS)	0.167	NA	5.400061
1112	2	132201288	132201288	A	G	ncRNA_exonic	LOC401010	NA	NA	NA	ncRNA_exonic	ENSG00000217950	NA	NA	NA	Score=774;Name=lod=1864	NA	2q21.1	NA	NA	NA	NA	rs4337511	NA	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2673	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.601928	NA	NA	NA	NA	NA	0.21	NA	5.3993666
1112	10	45869895	45869895	A	G	intronic	ALOX5	NA	NA	NA	intronic	ENSG00000012779	NA	NA	NA	NA	NA	10q11.21	NA	Name=E2F6_(H-50),E2F6	Name=36	NA	rs111916157	0.19	0.19	0.125	0.186502	0.2018	0.1835	0.1484	0.1944	0.1902	0.2	0.19	0.16	0.19	0.2444	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.564672	NA	NA	0.154486	0.135191	NA	0.043	NA	5.399314
1112	19	9088722	9088722	G	A	exonic	MUC16	NA	synonymous SNV	MUC16:NM_024690:exon1:c.C3093T:p.G1031G	exonic	ENSG00000181143	NA	synonymous SNV	ENSG00000181143:ENST00000397910:exon1:c.C3093T:p.G1031G	NA	NA	19p13.2	NA	NA	NA	NA	rs17000948	0.14	0.14	0.141	0.14377	0.0855	0.2282	0.1124	0.1437	0.1391	0.09	0.26	0.1	0.12	0.1076	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.358155	NA	NA	0.075535	0.12873	NA	0.145	NA	5.3980316
1112	20	46268493	46268493	A	G	exonic	NCOA3	NA	synonymous SNV	NCOA3:NM_001174087:exon15:c.A2880G:p.T960T,NCOA3:NM_001174088:exon15:c.A2865G:p.T955T,NCOA3:NM_006534:exon15:c.A2880G:p.T960T,NCOA3:NM_181659:exon15:c.A2880G:p.T960T	exonic	ENSG00000124151	NA	synonymous SNV	ENSG00000124151:ENST00000341724:exon14:c.A2670G:p.T890T,ENSG00000124151:ENST00000371997:exon15:c.A2865G:p.T955T,ENSG00000124151:ENST00000371998:exon15:c.A2880G:p.T960T,ENSG00000124151:ENST00000372004:exon15:c.A2880G:p.T960T	NA	NA	20q13.12	NA	NA	NA	NA	rs2076546	0.12	0.12	0.154	0.134385	0.0845	0.0933	0.0879	0.2549	0.0982	0.09	0.08	0.07	0.27	0.0968	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.573536	NA	NA	0.087442	0.235815	NA	0.217	NA	5.3979246
1112	20	34443173	34443173	G	C	intronic	PHF20	NA	NA	NA	intronic	ENSG00000025293	NA	NA	NA	NA	NA	20q11.23	NA	Name=CEBPB,GATA3_(SC-268)	Name=15	NA	rs2425171	0.23	0.23	0.234	0.293331	0.1869	0.1835	0.1859	0.4365	0.3988	0.18	0.16	0.22	0.41	0.2266	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.023479	NA	NA	0.188599	0.400685	NA	0.239	NA	5.397901
1112	19	14581063	14581063	A	G	exonic	PKN1	NA	synonymous SNV	PKN1:NM_002741:exon19:c.A2382G:p.R794R,PKN1:NM_213560:exon19:c.A2400G:p.R800R	exonic	ENSG00000123143	NA	synonymous SNV	ENSG00000123143:ENST00000242783:exon19:c.A2382G:p.R794R,ENSG00000123143:ENST00000342216:exon19:c.A2400G:p.R800R	NA	NA	19p13.12	NA	NA	NA	NA	rs1042728	0.18	0.18	0.176	0.199481	0.0825	0.1081	0.1542	0.4796	0.0675	0.09	0.11	0.18	0.4	0.117	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.811729	NA	NA	0.069302	0.425783	NA	0.181	NA	5.3978646
1112	6	159206251	159206251	T	C	intronic	EZR	NA	NA	NA	intronic	ENSG00000092820	NA	NA	NA	NA	NA	6q25.3	NA	Name=Pol2-4H8	Name=7	NA	rs2306746	0.42	0.42	0.408	0.414936	0.6024	0.2054	0.3545	0.3918	0.5123	0.61	0.17	0.42	0.39	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.035662	NA	NA	NA	NA	NA	0.449	NA	5.3976
1112	17	7942434	7942434	A	G	UTR5	ALOX15B	NM_001141:c.-40A>G,NM_001039131:c.-40A>G,NM_001039130:c.-40A>G	NA	NA	UTR5	ENSG00000179593	ENST00000380183:c.-40A>G,ENST00000572022:c.-40A>G,ENST00000380173:c.-40A>G	NA	NA	NA	NA	17p13.1	NA	Name=Pol2	Name=7	NA	rs73972649	0.32	0.32	0.286	0.309105	0.3082	0.2738	0.2579	0.4289	0.2209	0.32	0.27	0.28	0.42	0.3067	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.881622	NA	NA	0.32093	0.401498	NA	0.159	NA	5.3975034
1112	7	11581134	11581134	T	C	exonic	THSD7A	NA	synonymous SNV	THSD7A:NM_015204:exon6:c.A1734G:p.A578A	exonic	ENSG00000005108	NA	synonymous SNV	ENSG00000005108:ENST00000423059:exon6:c.A1734G:p.A578A	Score=636;Name=lod=512	NA	7p21.3	NA	NA	NA	NA	rs2074603	0.46	0.46	0.452	0.471645	0.4245	0.5387	0.3775	0.4902	0.4928	0.42	0.51	0.41	0.49	0.4275	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.746384	1.746384	NA	0.417168	0.464052	NA	0.565	NA	5.3974986
1112	12	58112189	58112189	A	G	exonic	OS9	NA	synonymous SNV	OS9:NM_001261421:exon10:c.A1299G:p.E433E,OS9:NM_001261422:exon10:c.A1239G:p.E413E,OS9:NM_001017956:exon11:c.A1395G:p.E465E,OS9:NM_001261420:exon11:c.A1398G:p.E466E,OS9:NM_006812:exon11:c.A1395G:p.E465E	exonic	ENSG00000135506	NA	synonymous SNV	ENSG00000135506:ENST00000547079:exon4:c.A474G:p.E158E,ENSG00000135506:ENST00000413095:exon6:c.A777G:p.E259E,ENSG00000135506:ENST00000435406:exon10:c.A1239G:p.E413E,ENSG00000135506:ENST00000551035:exon10:c.A1299G:p.E433E,ENSG00000135506:ENST00000257966:exon11:c.A1398G:p.E466E,ENSG00000135506:ENST00000315970:exon11:c.A1395G:p.E465E,ENSG00000135506:ENST00000552285:exon11:c.A1395G:p.E465E	Score=551;Name=lod=232	NA	12q14.1	NA	NA	NA	NA	rs799265	0.35	0.35	0.34	0.345447	0.4473	0.2698	0.3473	0.3601	0.2975	0.43	0.19	0.4	0.36	0.3813	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.879427	NA	NA	0.441047	0.388561	NA	0.391	NA	5.3970196
1112	3	47464122	47464122	A	G	intronic	SCAP	NA	NA	NA	intronic	ENSG00000114650	NA	NA	NA	NA	NA	3p21.31	NA	Name=CTCF_(C-20),Rad21,Max,c-Myc,CTCF,CTCF_(SC-5916)	Name=60	NA	rs1038394	0.48	0.48	0.453	0.459265	0.6034	0.4633	0.5202	0.2428	0.5562	0.6	0.46	0.52	0.3	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.167485	NA	NA	NA	NA	NA	0.536	NA	5.3966
1112	7	44005528	44005528	C	T	ncRNA_exonic	POLR2J4	NA	NA	NA	ncRNA_exonic	ENSG00000214783,ENSG00000241057	NA	NA	NA	Score=429;Name=lod=74	NA	7p13	NA	NA	NA	NA	rs11766894	0.13	0.13	0.108	0.104233	0.1402	0.0615	0.1614	0.1127	0.0593	0.15	0.08	0.15	0.13	0.1301	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.312421	NA	NA	NA	NA	NA	NA	NA	5.3963666
1112	1	114429340	114429340	T	C	ncRNA_intronic	AP4B1-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000226167	NA	NA	NA	NA	NA	1p13.2	NA	NA	Name=5	NA	rs1746860	0.35	0.35	0.378	0.376797	0.2704	0.0794	0.2536	0.7988	0.3098	0.28	0.09	0.28	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.581591	1.581591	NA	NA	NA	NA	0.37	NA	5.3962666
1112	14	35409214	35409214	T	C	ncRNA_exonic	IGBP1P1	NA	NA	NA	ncRNA_exonic	ENSG00000226677	NA	NA	NA	Score=597;Name=lod=357	NA	14q13.2	NA	NA	NA	NA	rs1967723	0.31	0.31	0.3	0.304912	0.2704	0.37	0.2824	0.2837	0.318	0.28	0.38	0.25	0.32	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.087685	NA	NA	NA	NA	ID=COSN164662;OCCURENCE=1(breast)	0.254	NA	5.3962666
1112	16	69967897	69967897	T	C	exonic	WWP2	NA	synonymous SNV	WWP2:NM_199424:exon7:c.T390C:p.H130H,WWP2:NM_001270453:exon14:c.T1359C:p.H453H,WWP2:NM_001270454:exon17:c.T1707C:p.H569H,WWP2:NM_007014:exon18:c.T1707C:p.H569H	exonic	ENSG00000198373	NA	synonymous SNV	ENSG00000198373:ENST00000568684:exon7:c.T390C:p.H130H,ENSG00000198373:ENST00000542271:exon14:c.T1359C:p.H453H,ENSG00000198373:ENST00000356003:exon16:c.T1707C:p.H569H,ENSG00000198373:ENST00000359154:exon17:c.T1707C:p.H569H,ENSG00000198373:ENST00000448661:exon17:c.T1707C:p.H569H	Score=630;Name=lod=486	NA	16q22.1	NA	NA	NA	Score=53;Name=926664_0_-_53	rs2270841	0.85	0.85	0.848	0.854633	0.7525	0.9683	0.7507	0.947	0.7914	0.74	0.97	0.79	0.92	0.7761	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.21184	NA	NA	0.74186	0.896497	ID=COSM435641;OCCURENCE=1(breast)	0.783	NA	5.3962066
1112	7	44259706	44259706	G	A	exonic	CAMK2B	NA	synonymous SNV	CAMK2B:NM_172084:exon15:c.C1305T:p.N435N,CAMK2B:NM_172083:exon17:c.C1395T:p.N465N,CAMK2B:NM_172081:exon18:c.C1467T:p.N489N,CAMK2B:NM_172079:exon19:c.C1512T:p.N504N,CAMK2B:NM_172080:exon19:c.C1509T:p.N503N,CAMK2B:NM_172082:exon19:c.C1434T:p.N478N,CAMK2B:NM_172078:exon20:c.C1584T:p.N528N,CAMK2B:NM_001220:exon23:c.C1956T:p.N652N	exonic	ENSG00000058404	NA	synonymous SNV	ENSG00000058404:ENST00000425809:exon4:c.C510T:p.N170N,ENSG00000058404:ENST00000346990:exon15:c.C1305T:p.N435N,ENSG00000058404:ENST00000353625:exon17:c.C1395T:p.N465N,ENSG00000058404:ENST00000358707:exon18:c.C1467T:p.N489N,ENSG00000058404:ENST00000258682:exon19:c.C1509T:p.N503N,ENSG00000058404:ENST00000347193:exon19:c.C1434T:p.N478N,ENSG00000058404:ENST00000395747:exon19:c.C1512T:p.N504N,ENSG00000058404:ENST00000457475:exon19:c.C1512T:p.N504N,ENSG00000058404:ENST00000350811:exon20:c.C1584T:p.N528N,ENSG00000058404:ENST00000440254:exon20:c.C1584T:p.N528N,ENSG00000058404:ENST00000395749:exon23:c.C1956T:p.N652N	Score=551;Name=lod=231	NA	7p13	NA	NA	NA	NA	rs1065359	0.34	0.34	0.328	0.339058	0.4085	0.3879	0.3213	0.1596	0.4724	0.42	0.38	0.33	0.19	0.4449	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.46927	1.46927	NA	0.417423	0.220682	NA	0.268	NA	5.3958436
1112	9	129158002	129158002	G	A	UTR3	MVB12B	NM_001011703:c.*22G>A	NA	NA	UTR3	ENSG00000196814	ENST00000545391:c.*22G>A,ENST00000535766:c.*22G>A	NA	NA	NA	NA	9q33.3	NA	Name=c-Fos,c-Jun,STAT3	Name=105	NA	rs722538	0.24	0.24	0.242	0.265575	0.2992	0.0933	0.232	0.2837	0.408	0.31	0.09	0.25	0.27	0.3218	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.281375	NA	NA	0.317209	0.303677	NA	0.304	NA	5.3951244
1112	21	47836216	47836216	A	G	exonic	PCNT	NA	synonymous SNV	PCNT:NM_006031:exon30:c.A6384G:p.T2128T	exonic	ENSG00000160299	NA	synonymous SNV	ENSG00000160299:ENST00000359568:exon30:c.A6384G:p.T2128T	NA	NA	21q22.3	NA	NA	NA	NA	rs60444527	0.16	0.16	0.151	0.177915	0.0924	0.004	0.0922	0.4856	0.09	0.1	0.0035	0.1	0.47	0.1034	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.02594	NA	NA	0.075814	0.433954	NA	0.196	NA	5.3950526
1112	10	43613843	43613843	G	T	exonic	RET	NA	synonymous SNV	RET:NM_020630:exon13:c.G2307T:p.L769L,RET:NM_020975:exon13:c.G2307T:p.L769L	exonic	ENSG00000165731	NA	synonymous SNV	ENSG00000165731:ENST00000340058:exon13:c.G2307T:p.L769L,ENSG00000165731:ENST00000355710:exon13:c.G2307T:p.L769L	Score=621;Name=lod=444	NA	10q11.21	NA	NA	NA	NA	rs1800861	0.72	0.72	0.722	0.71246	0.7644	0.4742	0.7478	0.9206	0.5982	0.76	0.49	0.77	0.9	0.7419	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.1353	NA	NA	0.765349	0.875397	NA	0.826	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=No_MEN2_disease|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000021844.1|RCV000127779.1;CLNDSDB=.|.;CLNDSDBID=.|.	5.3950176
1113	8	74888494	74888494	C	T	UTR5	TMEM70	NM_017866:c.-23C>T,NM_001040613:c.-23C>T	NA	NA	UTR5	ENSG00000175606	ENST00000416961:c.-23C>T,ENST00000517439:c.-23C>T,ENST00000312184:c.-23C>T	NA	NA	NA	NA	8q21.11	NA	Name=Max,ELF1_(SC-631),Oct-2,TAF1,E2F6_(H-50),POU2F2,HMGN3,Pol2,Pol2(phosphoS2),TAF7_(SQ-8),BCLAF1_(M33-P5B11),E2F6,CCNT2,c-Myc,HEY1,PAX5-N19,Nrf1,TCF12,TBP,Egr-1,Sin3Ak-20,Pbx3,Pol2-4H8	Name=146	NA	rs2306486	0.21	0.21	0.208	0.216653	0.2893	0.1925	0.232	0.115	0.2935	0.29	0.19	0.21	0.11	0.3545	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.957723	NA	NA	0.294549	0.146658	NA	0.029	NA	5.3949844
1113	6	31322888	31322888	A	G	exonic	HLA-B	NA	synonymous SNV	HLA-B:NM_005514:exon5:c.T1008C:p.S336S	exonic	ENSG00000234745	NA	synonymous SNV	ENSG00000234745:ENST00000412585:exon5:c.T1008C:p.S336S	NA	NA	6p21.33	NA	Name=Pol2,Pol2-4H8	Name=2	NA	rs1140546	0.78	0.78	0.793	0.819489	0.7634	0.754	0.7666	0.8835	0.8957	0.76	0.76	0.75	0.87	0.7713	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.407147	NA	NA	0.737357	0.834878	NA	0.775	NA	5.3946096
1113	17	4645324	4645324	T	C	exonic	ZMYND15	NA	synonymous SNV	ZMYND15:NM_001136046:exon4:c.T942C:p.H314H,ZMYND15:NM_001267822:exon4:c.T942C:p.H314H,ZMYND15:NM_032265:exon4:c.T942C:p.H314H	exonic	ENSG00000141497	NA	synonymous SNV	ENSG00000141497:ENST00000269289:exon3:c.T942C:p.H314H,ENSG00000141497:ENST00000573751:exon3:c.T942C:p.H314H,ENSG00000141497:ENST00000433935:exon4:c.T942C:p.H314H,ENSG00000141497:ENST00000592813:exon4:c.T942C:p.H314H	Score=609;Name=lod=397	NA	17p13.2	NA	NA	NA	NA	rs3826517	0.27	0.27	0.249	0.256589	0.4642	0.1438	0.3271	0.0408	0.4008	0.45	0.16	0.36	0.05	0.3601	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.354136	NA	NA	0.448023	0.114616	NA	0.29	NA	5.3943436
1113	5	52369002	52369002	G	A	exonic	ITGA2	NA	synonymous SNV	ITGA2:NM_002203:exon20:c.G2484A:p.T828T	exonic	ENSG00000164171	NA	synonymous SNV	ENSG00000164171:ENST00000296585:exon20:c.G2484A:p.T828T,ENSG00000164171:ENST00000510722:exon20:c.G2484A:p.T828T	NA	NA	5q11.2	NA	NA	NA	NA	rs3212327	0.1	0.1	0.112	0.104233	0.0885	0.0317	0.0663	0.2035	0.0879	0.09	0.03	0.06	0.26	0.0878	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.405892	NA	NA	0.096279	0.182025	NA	0.109	NA	5.3940876
1113	19	42463447	42463447	C	T	UTR5	RABAC1	NM_006423:c.-3G>A	NA	NA	UTR5	ENSG00000105404	ENST00000222008:c.-3G>A,ENST00000601891:c.-3G>A	NA	NA	Score=446;Name=lod=87	NA	19q13.2	NA	Name=ELF1_(SC-631),SP1,Pol2,TAF1,IRF1,TBP,USF-1,SIX5,HEY1,CCNT2,ZBTB7A_(SC-34508),Pol2-4H8,ZNF263	Name=148	NA	rs735571	0.73	0.73	0.713	0.717652	0.6451	0.8165	0.6859	0.8056	0.5941	0.67	0.82	0.65	0.79	0.6579	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.064207	2.064207	NA	0.636628	0.763958	NA	0.696	NA	5.3937054
1113	7	148487329	148487329	G	T	intronic	CUL1	NA	NA	NA	intronic	ENSG00000055130	NA	NA	NA	NA	NA	7q36.1	NA	Name=GATA-1	Name=4	NA	rs933436	0.7	0.7	0.716	0.708866	0.6064	0.7014	0.7478	0.8533	0.5992	0.61	0.68	0.69	0.87	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.398697	NA	NA	NA	NA	NA	0.63	NA	5.3936
1113	11	123712153	123712153	G	C	intergenic	OR6M1,TMEM225	dist=35096;dist=41480	NA	NA	ncRNA_exonic	ENSG00000254613	NA	NA	NA	NA	NA	11q24.1	NA	Name=c-Fos,GATA-2,c-Jun	Name=26	NA	rs4936852	0.65	0.65	0.662	0.641573	0.6064	0.5556	0.6816	0.7852	0.544	0.62	0.56	0.65	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.302401	NA	NA	NA	NA	NA	0.674	NA	5.3936
1113	5	174353718	174353718	A	T	ncRNA_intronic	FLJ16171	NA	NA	NA	ncRNA_exonic	ENSG00000248293	NA	NA	NA	Score=600;Name=lod=367	NA	5q35.2	NA	NA	NA	NA	rs12656137	0.33	0.33	0.293	0.347843	0.2734	0.6071	0.2493	0.1112	0.547	0.27	0.6	0.26	0.15	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.300767	1.300767	NA	NA	NA	NA	0.297	NA	5.3932666
1113	9	89699790	89699790	G	C	ncRNA_exonic	LOC494127	NA	NA	NA	ncRNA_exonic	ENSG00000224887	NA	NA	NA	Score=634;Name=lod=503	NA	9q21.33	NA	NA	NA	NA	rs12552232	0.32	0.32	0.334	0.31869	0.2734	0.2341	0.1859	0.5575	0.2239	0.26	0.25	0.19	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.015701	NA	NA	NA	NA	NA	0.297	NA	5.3932666
1113	12	8389625	8389625	C	G	ncRNA_intronic	FAM86FP	NA	NA	NA	ncRNA_exonic	ENSG00000164845	NA	NA	NA	Score=456;Name=lod=95	NA	12p13.31	NA	NA	NA	NA	rs2965691	0.43	0.43	0.398	0.503994	0.2734	0.5863	0.5389	0.6006	0.501	0.26	0.52	0.44	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.218836	NA	NA	NA	NA	NA	0.312	NA	5.3932666
1113	10	43281089	43281089	T	C	exonic	BMS1	NA	synonymous SNV	BMS1:NM_014753:exon3:c.T336C:p.T112T	exonic	ENSG00000165733	NA	synonymous SNV	ENSG00000165733:ENST00000374518:exon3:c.T336C:p.T112T	Score=480;Name=lod=119	NA	10q11.21	NA	NA	NA	NA	rs7074877	0.53	0.53	0.498	0.561102	0.4185	0.6359	0.4899	0.6293	0.589	0.4	0.63	0.5	0.62	0.4641	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.583592	NA	NA	0.391047	0.596459	NA	0.457	NA	5.3930196
1113	14	94510964	94510964	T	C	exonic	OTUB2	NA	synonymous SNV	OTUB2:NM_023112:exon5:c.T336C:p.D112D	exonic	ENSG00000089723	NA	synonymous SNV	ENSG00000089723:ENST00000203664:exon5:c.T336C:p.D112D	Score=425;Name=lod=71	NA	14q32.12	NA	NA	NA	NA	rs2273226	0.52	0.52	0.509	0.490216	0.4076	0.4306	0.5288	0.6853	0.3456	0.42	0.48	0.49	0.73	0.4459	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.014059	NA	NA	0.420233	0.662279	NA	0.565	NA	5.3929336
1113	18	2763697	2763697	C	T	exonic	SMCHD1	NA	synonymous SNV	SMCHD1:NM_015295:exon37:c.C4629T:p.G1543G	exonic	ENSG00000101596	NA	synonymous SNV	ENSG00000101596:ENST00000577880:exon26:c.C3042T:p.G1014G,ENSG00000101596:ENST00000261598:exon37:c.C4629T:p.G1543G,ENSG00000101596:ENST00000320876:exon37:c.C4629T:p.G1543G	Score=503;Name=lod=147	NA	18p11.32	NA	NA	NA	NA	rs483547	0.34	0.34	0.31	0.275759	0.4612	0.1895	0.317	0.264	0.1605	0.45	0.24	0.37	0.24	0.3721	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.723845	NA	NA	0.44063	0.298312	ID=COSM1388387,COSM1388386,COSM1388388;OCCURENCE=1(large_intestine)	0.232	NA	5.3927366
1113	14	93170901	93170901	A	C	intronic	LGMN	NA	NA	NA	intronic	ENSG00000100600	NA	NA	NA	NA	NA	14q32.12	NA	Name=NFKB,ZEB1_(SC-25388),PAX5-N19,PU.1,IRF4_(M-17),EBF1_(C-8)	Name=16	NA	rs2402189	0.72	0.72	0.722	0.729034	0.6074	0.7659	0.7738	0.8434	0.6299	0.6	0.75	0.74	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.346782	NA	NA	NA	NA	NA	0.609	NA	5.3926
1113	16	19547357	19547357	A	G	exonic	CCP110	NA	synonymous SNV	CCP110:NM_001199022:exon4:c.A366G:p.T122T,CCP110:NM_014711:exon5:c.A366G:p.T122T	exonic	ENSG00000103540	NA	synonymous SNV	ENSG00000103540:ENST00000561888:exon2:c.A198G:p.T66T,ENSG00000103540:ENST00000381396:exon4:c.A366G:p.T122T,ENSG00000103540:ENST00000396208:exon4:c.A366G:p.T122T,ENSG00000103540:ENST00000396212:exon5:c.A366G:p.T122T	NA	NA	16p12.3	NA	NA	NA	NA	rs10492785	0.22	0.22	0.204	0.217252	0.0746	0.3849	0.2536	0.2474	0.1247	0.07	0.38	0.21	0.28	0.1347	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.194088	NA	NA	0.065	0.211425	ID=COSM148032;OCCURENCE=1(stomach)	0.188	NA	5.3923666
1113	19	46180414	46180414	G	T	intronic	GIPR	NA	NA	NA	intronic	ENSG00000010310	NA	NA	NA	NA	NA	19q13.32	NA	Name=ELF1_(SC-631),Pol2	Name=9	NA	rs34783010	0.18	0.18	0.174	0.159545	0.2137	0.2083	0.1268	0.1165	0.135	0.21	0.22	0.14	0.12	0.1886	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.123175	NA	NA	0.205492	0.110632	NA	0.159	NA	5.392208
1113	3	53222761	53222761	C	T	exonic	PRKCD	NA	synonymous SNV	PRKCD:NM_212539:exon15:c.C1441T:p.L481L,PRKCD:NM_006254:exon16:c.C1441T:p.L481L	exonic	ENSG00000163932	NA	synonymous SNV	ENSG00000163932:ENST00000394729:exon15:c.C1441T:p.L481L,ENSG00000163932:ENST00000330452:exon16:c.C1441T:p.L481L	Score=458;Name=lod=97	NA	3p21.1	Score=877;Name=V$OCT1_06	NA	NA	NA	rs2306574	0.73	0.73	0.732	0.713458	0.7505	0.7639	0.719	0.702	0.635	0.74	0.78	0.72	0.67	0.748	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.280246	1.280246	NA	0.776047	0.723559	ID=COSM149403;OCCURENCE=1(stomach)	0.783	NA	5.3921196
1113	8	134420210	134420210	G	A	intergenic	NDRG1,ST3GAL1	dist=110663;dist=46881	NA	NA	upstream	ENSG00000225259	NA	NA	NA	Score=773;Name=lod=1853	NA	8q24.22	NA	Name=USF-1	NA	NA	rs1989290	0.13	0.13	0.11	0.128594	0.1083	0.0506	0.1974	0.208	0.0736	0.11	0.05	0.18	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.275927	NA	NA	NA	NA	NA	0.123	NA	5.3917
1113	1	24413159	24413159	T	C	exonic	MYOM3	NA	synonymous SNV	MYOM3:NM_152372:exon15:c.A1773G:p.E591E	exonic	ENSG00000142661	NA	synonymous SNV	ENSG00000142661:ENST00000329601:exon15:c.A1773G:p.E591E,ENSG00000142661:ENST00000330966:exon15:c.A1776G:p.E592E,ENSG00000142661:ENST00000374434:exon15:c.A1773G:p.E591E	Score=428;Name=lod=73	NA	1p36.11	NA	NA	NA	NA	rs6424152	0.41	0.41	0.382	0.3748	0.4463	0.4623	0.353	0.3646	0.2403	0.46	0.45	0.34	0.35	0.4012	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.366683	NA	NA	0.427709	0.35018	NA	0.341	NA	5.3914576
1113	2	220162015	220162015	C	G	exonic	PTPRN	NA	synonymous SNV	PTPRN:NM_001199763:exon13:c.G1941C:p.P647P,PTPRN:NM_001199764:exon14:c.G1758C:p.P586P,PTPRN:NM_002846:exon14:c.G2028C:p.P676P	exonic	ENSG00000054356	NA	synonymous SNV	ENSG00000054356:ENST00000409251:exon13:c.G1941C:p.P647P,ENSG00000054356:ENST00000295718:exon14:c.G2028C:p.P676P,ENSG00000054356:ENST00000423636:exon14:c.G1758C:p.P586P	NA	NA	2q35	NA	NA	NA	NA	rs17847406	0.06	0.06	0.056	0.0638978	0.0895	0.0437	0.072	0.0234	0.1074	0.08	0.04	0.1	0.02	0.0852	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.356314	NA	NA	0.101163	0.034725	NA	0.123	NA	5.3908036
1113	6	159184462	159184462	A	G	exonic	SYTL3	NA	synonymous SNV	SYTL3:NM_001242395:exon15:c.A1440G:p.S480S,SYTL3:NM_001009991:exon16:c.A1440G:p.S480S,SYTL3:NM_001242394:exon17:c.A1644G:p.S548S,SYTL3:NM_001242384:exon18:c.A1644G:p.S548S	exonic	ENSG00000164674	NA	synonymous SNV	ENSG00000164674:ENST00000367081:exon9:c.A822G:p.S274S,ENSG00000164674:ENST00000297239:exon16:c.A1644G:p.S548S,ENSG00000164674:ENST00000360448:exon16:c.A1440G:p.S480S	NA	NA	6q25.3	NA	Name=Pol2-4H8	Name=29	NA	rs2291387	0.64	0.64	0.658	0.649361	0.7863	0.247	0.4683	0.9304	0.6718	0.8	0.22	0.55	0.93	0.701	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.706365	NA	NA	0.788721	0.9133	NA	0.667	NA	5.3906456
1113	17	76482435	76482435	C	T	exonic	DNAH17	NA	synonymous SNV	DNAH17:NM_173628:exon45:c.G6972A:p.T2324T	exonic	ENSG00000187775	NA	synonymous SNV	ENSG00000187775:ENST00000389840:exon45:c.G6930A:p.T2310T,ENSG00000187775:ENST00000585328:exon45:c.G6957A:p.T2319T	NA	NA	17q25.3	NA	NA	NA	NA	rs61743860	0.09	0.09	0.088	0.0824681	0.0924	0.1478	0.0634	0.0234	0.0982	0.1	0.16	0.07	0.02	0.0927	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.582405	NA	NA	0.091079	0.036288	NA	0.087	NA	5.3904876
1113	6	42883669	42883669	C	T	upstream	PTCRA	NA	NA	NA	upstream	ENSG00000171611	NA	NA	NA	NA	NA	6p21.1	NA	Name=TCF12	Name=6	NA	rs9471958	0.17	0.17	0.182	0.169529	0.2763	0.0218	0.196	0.1505	0.2188	0.27	0.02	0.22	0.15	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.654103	NA	NA	NA	NA	NA	0.196	NA	5.3903666
1113	10	81371698	81371698	C	T	exonic	SFTPA1	NA	synonymous SNV	SFTPA1:NM_001164647:exon2:c.C117T:p.H39H,SFTPA1:NM_001093770:exon3:c.C162T:p.H54H,SFTPA1:NM_001164644:exon3:c.C117T:p.H39H,SFTPA1:NM_005411:exon3:c.C117T:p.H39H	exonic	ENSG00000122852	NA	synonymous SNV	ENSG00000122852:ENST00000428376:exon2:c.C117T:p.H39H,ENSG00000122852:ENST00000429958:exon2:c.C117T:p.H39H,ENSG00000122852:ENST00000372308:exon3:c.C117T:p.H39H,ENSG00000122852:ENST00000398636:exon3:c.C117T:p.H39H,ENSG00000122852:ENST00000419470:exon3:c.C162T:p.H54H,ENSG00000122852:ENST00000439264:exon3:c.C117T:p.H39H	NA	NA	10q22.3	NA	NA	NA	NA	rs4253512	0.13	0.13	0.093	0.150958	0.1342	0.2133	0.0807	0.1029	0.2188	0.13	0.21	0.09	0.08	0.1423	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.581137	NA	NA	NA	NA	NA	0.087	NA	5.3901666
1113	11	72408657	72408657	C	T	exonic	ARAP1	NA	synonymous SNV	ARAP1:NM_001135190:exon17:c.G1857A:p.L619L,ARAP1:NM_015242:exon18:c.G2040A:p.L680L,ARAP1:NM_001040118:exon20:c.G2775A:p.L925L	exonic	ENSG00000186635	NA	synonymous SNV	ENSG00000186635:ENST00000427971:exon7:c.G639A:p.L213L,ENSG00000186635:ENST00000452383:exon7:c.G639A:p.L213L,ENSG00000186635:ENST00000393605:exon15:c.G2055A:p.L685L,ENSG00000186635:ENST00000429686:exon17:c.G1857A:p.L619L,ENSG00000186635:ENST00000334211:exon18:c.G2040A:p.L680L,ENSG00000186635:ENST00000426523:exon18:c.G2040A:p.L680L,ENSG00000186635:ENST00000455638:exon18:c.G2775A:p.L925L,ENSG00000186635:ENST00000359373:exon20:c.G2775A:p.L925L,ENSG00000186635:ENST00000393609:exon20:c.G2775A:p.L925L	Score=532;Name=lod=194	NA	11q13.4	NA	NA	NA	NA	rs2291289	0.28	0.28	0.258	0.258986	0.4384	0.2569	0.3357	0.0393	0.319	0.41	0.25	0.37	0.05	0.378	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.988809	NA	NA	0.460168	0.109318	NA	0.297	NA	5.3900986
1113	8	27255263	27255263	A	G	exonic	PTK2B	NA	synonymous SNV	PTK2B:NM_173175:exon2:c.A162G:p.K54K,PTK2B:NM_173176:exon2:c.A162G:p.K54K,PTK2B:NM_004103:exon3:c.A162G:p.K54K,PTK2B:NM_173174:exon7:c.A162G:p.K54K	exonic	ENSG00000120899	NA	synonymous SNV	ENSG00000120899:ENST00000517339:exon1:c.A162G:p.K54K,ENSG00000120899:ENST00000346049:exon2:c.A162G:p.K54K,ENSG00000120899:ENST00000412793:exon2:c.A162G:p.K54K,ENSG00000120899:ENST00000420218:exon2:c.A162G:p.K54K,ENSG00000120899:ENST00000522517:exon2:c.A162G:p.K54K,ENSG00000120899:ENST00000521164:exon3:c.A162G:p.K54K,ENSG00000120899:ENST00000522338:exon4:c.A162G:p.K54K,ENSG00000120899:ENST00000544172:exon6:c.A162G:p.K54K,ENSG00000120899:ENST00000338238:exon7:c.A162G:p.K54K,ENSG00000120899:ENST00000397501:exon7:c.A162G:p.K54K	Score=567;Name=lod=269	NA	8p21.2	NA	NA	NA	NA	rs1045512	0.34	0.34	0.33	0.317692	0.4304	0.2748	0.3818	0.2057	0.3517	0.44	0.27	0.38	0.22	0.3998	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.399391	1.399391	NA	0.446512	0.23241	ID=COSM150475;OCCURENCE=1(stomach)	0.304	NA	5.3899546
1113	6	38781866	38781866	C	G	exonic	DNAH8	NA	synonymous SNV	DNAH8:NM_001206927:exon25:c.C3294G:p.S1098S	exonic	ENSG00000124721	NA	synonymous SNV	ENSG00000124721:ENST00000441566:exon21:c.C2643G:p.S881S,ENSG00000124721:ENST00000359357:exon23:c.C2643G:p.S881S,ENSG00000124721:ENST00000327475:exon24:c.C3258G:p.S1086S,ENSG00000124721:ENST00000449981:exon25:c.C3294G:p.S1098S	Score=510;Name=lod=158	NA	6p21.2	NA	NA	NA	NA	rs1678690	0.5	0.5	0.471	0.501198	0.3748	0.7946	0.5908	0.3124	0.5204	0.38	0.78	0.55	0.33	0.4691	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.069729	NA	NA	0.433256	0.338856	ID=COSM1131871;OCCURENCE=1(prostate)	0.551	NA	5.3895106
1113	7	66289040	66289040	C	T	ncRNA_exonic	GTF2IRD1P1	NA	NA	NA	ncRNA_exonic	ENSG00000230583	NA	NA	NA	Score=608;Name=lod=393	NA	7q11.21	NA	NA	NA	NA	rs6460315	0.41	0.41	0.393	0.463259	0.2773	0.4524	0.3516	0.6884	0.4407	0.26	0.44	0.34	0.66	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.793624	NA	NA	NA	NA	NA	0.507	NA	5.3893666
1113	12	80707236	80707236	T	A	intronic	OTOGL	NA	NA	NA	intronic	ENSG00000165899	NA	NA	NA	NA	NA	12q21.31	NA	Name=Rad21,CTCF,CTCF_(C-20)	Name=20	NA	rs11114396	0.16	0.16	0.157	0.183307	0.1958	0.0556	0.2147	0.2103	0.2434	0.19	0.05	0.21	0.22	0.2175	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.206992	NA	NA	0.197939	0.184006	NA	0.094	NA	5.388761
1113	19	6733517	6733517	A	G	intronic	GPR108	NA	NA	NA	intronic	ENSG00000125734	NA	NA	NA	NA	NA	19p13.3	NA	Name=CTCF_(SC-5916),CTCF,Rad21	Name=6	NA	rs339395	0.61	0.61	0.592	0.582668	0.6113	0.5694	0.5764	0.6551	0.4734	0.6	0.59	0.58	0.67	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.196848	NA	NA	NA	NA	NA	0.464	NA	5.3887
1113	1	204945934	204945934	A	G	exonic	NFASC	NA	synonymous SNV	NFASC:NM_001160333:exon15:c.A1824G:p.P608P,NFASC:NM_001005389:exon16:c.A1842G:p.P614P	exonic	ENSG00000163531	NA	synonymous SNV	ENSG00000163531:ENST00000403080:exon16:c.A1842G:p.P614P	NA	NA	1q32.1	NA	NA	NA	NA	rs6657372	0.09	0.09	0.083	0.0920527	0.0706	0.0089	0.0648	0.2057	0.0654	0.07	0.01	0.07	0.24	0.095	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.83029	1.83029	NA	0.112442	0.217204	NA	0.109	NA	5.3886246
1113	15	101598314	101598314	C	T	exonic	LRRK1	NA	synonymous SNV	LRRK1:NM_024652:exon29:c.C4647T:p.T1549T	exonic	ENSG00000154237	NA	synonymous SNV	ENSG00000154237:ENST00000388948:exon29:c.C4647T:p.T1549T,ENSG00000154237:ENST00000284395:exon30:c.C4638T:p.T1546T	Score=524;Name=lod=179	NA	15q26.3	NA	NA	NA	NA	rs11853661	0.3	0.3	0.304	0.309904	0.4374	0.1329	0.2795	0.2821	0.4202	0.45	0.13	0.34	0.24	0.3903	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.376754	NA	NA	0.450399	0.289811	NA	0.377	NA	5.3885676
1113	7	150916228	150916228	G	A	exonic	ABCF2	NA	synonymous SNV	ABCF2:NM_005692:exon8:c.C939T:p.Y313Y,ABCF2:NM_007189:exon8:c.C939T:p.Y313Y	exonic	ENSG00000033050	NA	synonymous SNV	ENSG00000033050:ENST00000222388:exon8:c.C939T:p.Y313Y,ENSG00000033050:ENST00000287844:exon8:c.C939T:p.Y313Y	Score=543;Name=lod=215	NA	7q36.1	NA	NA	NA	NA	rs6949587	0.46	0.46	0.427	0.419329	0.4563	0.7202	0.4107	0.2095	0.3609	0.45	0.68	0.43	0.23	0.4107	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.590718	NA	NA	0.411279	0.225148	NA	0.435	NA	5.3883876
1113	9	89699193	89699193	C	G	ncRNA_exonic	LOC494127	NA	NA	NA	ncRNA_exonic	ENSG00000224887	NA	NA	NA	Score=590;Name=lod=334	NA	9q21.33	NA	NA	NA	NA	rs11141677	0.22	0.22	0.19	0.205272	0.2783	0.2282	0.2061	0.112	0.2321	0.27	0.24	0.2	0.11	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.511109	NA	NA	NA	NA	NA	0.167	NA	5.3883666
1113	11	73106237	73106237	A	C	exonic	RELT	NA	synonymous SNV	RELT:NM_032871:exon10:c.A1152C:p.P384P,RELT:NM_152222:exon10:c.A1152C:p.P384P	exonic	ENSG00000054967	NA	synonymous SNV	ENSG00000054967:ENST00000064780:exon10:c.A1152C:p.P384P,ENSG00000054967:ENST00000393580:exon10:c.A1152C:p.P384P	NA	NA	11q13.4	NA	NA	NA	NA	rs11544311	0.05	0.05	0.044	0.0469249	0.0954	0.0129	0.0476	0.0356	0.047	0.1	0.02	0.03	0.04	0.0838	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.788795	NA	NA	0.09993	0.043636	ID=COSM429822;OCCURENCE=1(breast)	0.123	NA	5.3875366
1113	1	109836835	109836835	A	G	UTR3	MYBPHL	NM_001265613:c.*26T>C,NM_001010985:c.*26T>C	NA	NA	UTR3	ENSG00000221986	ENST00000357155:c.*26T>C	NA	NA	NA	NA	1p13.3	NA	Name=ELF1_(SC-631)	Name=61	NA	rs3738777	0.32	0.32	0.292	0.324081	0.3211	0.4732	0.3501	0.093	0.4673	0.34	0.47	0.3	0.12	0.3216	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.109053	NA	NA	0.303256	0.11961	NA	0.261	NA	5.3873774
1113	14	107083138	107083138	C	A	intergenic	LINC00221,NONE	dist=131609;dist=NONE	NA	NA	intronic	ENSG00000224373	NA	NA	NA	NA	NA	14q32.33	NA	Name=CTCF_(C-20),TCF12,ZNF263,CTCF_(SC-5916),Rad21,CTCF,Znf143_(16618-1-AP),CTCFL_(SC-98982)	Name=31	NA	rs11623505	0.33	0.33	0.265	0.394369	0.2793	0.4236	0.3343	0.3351	0.6053	0.27	0.39	0.33	0.35	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.368711	NA	NA	NA	NA	NA	0.152	NA	5.3873667
1113	6	32363955	32363955	T	C	exonic	BTNL2	NA	synonymous SNV	BTNL2:NM_019602:exon5:c.A939G:p.V313V	exonic	ENSG00000204290	NA	synonymous SNV	ENSG00000204290:ENST00000414363:exon3:c.A309G:p.V103V,ENSG00000204290:ENST00000540315:exon3:c.A309G:p.V103V,ENSG00000204290:ENST00000429232:exon4:c.A660G:p.V220V,ENSG00000204290:ENST00000544175:exon4:c.A108G:p.V36V,ENSG00000204290:ENST00000374993:exon5:c.A939G:p.V313V,ENSG00000204290:ENST00000374995:exon5:c.A657G:p.V219V,ENSG00000204290:ENST00000454136:exon5:c.A939G:p.V313V	NA	Name=Waist-hip ratio	6p21.32	NA	NA	NA	NA	rs2076529	0.36	0.36	0.355	0.376997	0.4364	0.2728	0.4784	0.3268	0.4192	0.42	0.31	0.48	0.25	0.4126	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.134769	NA	NA	0.430786	0.320979	NA	0.449	NA	5.3868806
1113	2	233321641	233321641	C	T	exonic	ALPI	NA	synonymous SNV	ALPI:NM_001631:exon4:c.C333T:p.S111S	exonic	ENSG00000163295	NA	synonymous SNV	ENSG00000163295:ENST00000295463:exon4:c.C333T:p.S111S	NA	NA	2q37.1	NA	NA	NA	NA	rs61732032	0.09	0.09	0.083	0.0942492	0.1064	0.0804	0.0807	0.112	0.0818	0.1	0.08	0.08	0.1	0.0914	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.524246	NA	NA	0.082209	0.111439	ID=COSM442478;OCCURENCE=1(breast)	0.101	NA	5.3866576
1113	1	158390252	158390252	T	G	exonic	OR10K2	NA	synonymous SNV	OR10K2:NM_001004476:exon1:c.A405C:p.L135L	exonic	ENSG00000180708	NA	synonymous SNV	ENSG00000180708:ENST00000314902:exon1:c.A405C:p.L135L	Score=295;Name=lod=21	NA	1q23.1	NA	NA	NA	NA	rs12239443	0.31	0.31	0.291	0.290136	0.4592	0.1687	0.2709	0.2526	0.3057	0.48	0.19	0.3	0.22	0.3825	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.4628	NA	NA	0.438372	0.268498	NA	0.312	NA	5.3865946
1113	19	41825776	41825776	A	G	intronic	CCDC97	NA	NA	NA	intronic	ENSG00000105329,ENSG00000142039	NA	NA	NA	NA	NA	19q13.2	NA	Name=Pol2-4H8	Name=9	NA	rs3826714	0.25	0.25	0.245	0.248602	0.1859	0.3532	0.2046	0.2935	0.1759	0.18	0.34	0.22	0.28	0.2596	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.160258	2.160258	NA	0.168063	0.27475	NA	0.232	NA	5.386437
1113	6	26033828	26033828	G	A	upstream	HIST1H2AB	NA	NA	NA	upstream	ENSG00000137259	NA	NA	NA	NA	NA	6p22.2	NA	Name=NFKB,HEY1,IRF3,SETDB1,GTF2B,p300,p300_(N-15),CHD2_(N-1250),GATA2_(CG2-96),GTF2F1_(RAP-74),IRF1,CEBPB,TBP,NF-YA,Pol2(b),TAF1,HMGN3,E2F4,Pol2(phosphoS2),SP1,Pol2,NELFe,c-Fos,Pol2-4H8,BCLAF1_(M33-P5B11),TAF7_(SQ-8),Sin3Ak-20,HA-E2F1	Name=148	NA	rs3830054	0.23	0.23	0.195	0.215655	0.0686	0.5149	0.268	0.0741	0.2127	0.08	0.56	0.21	0.09	0.1452	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.220894	NA	NA	0.06686	0.089424	NA	0.109	NA	5.3860066
1113	1	204006451	204006451	G	A	ncRNA_intronic	LINC00303	NA	NA	NA	ncRNA_exonic	ENSG00000176754	NA	NA	NA	NA	NA	1q32.1	NA	Name=CTCF	NA	NA	rs41264275	0.24	0.24	0.215	0.211661	0.2813	0.25	0.2781	0.0439	0.2802	0.3	0.27	0.3	0.07	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.193404	NA	NA	NA	NA	NA	0.188	NA	5.3853666
1113	15	76032283	76032283	A	G	ncRNA_exonic	DNM1P35	NA	NA	NA	ncRNA_intronic	ENSG00000260288	NA	NA	NA	Score=667;Name=lod=687	NA	15q24.2	NA	NA	NA	NA	rs34605750	0.24	0.24	0.19	0.235823	0.2813	0.2391	0.3545	0.1505	0.2168	0.29	0.2	0.31	0.16	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.070607	NA	NA	NA	NA	NA	0.326	NA	5.3853666
1113	1	5937168	5937168	G	A	exonic	NPHP4	NA	synonymous SNV	NPHP4:NM_015102:exon20:c.C2802T:p.R934R	exonic	ENSG00000131697	NA	synonymous SNV	ENSG00000131697:ENST00000378156:exon20:c.C2802T:p.R934R	NA	NA	1p36.31	NA	NA	NA	NA	rs3747992	0.48	0.48	0.467	0.453474	0.4225	0.7341	0.4597	0.2859	0.4182	0.44	0.74	0.4	0.3	0.4751	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.12077	NA	NA	0.38371	0.290047	ID=COSM426517;OCCURENCE=2(breast)	0.348	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000081712.1;CLNDSDB=.;CLNDSDBID=.	5.3853566
1113	7	122033379	122033379	A	G	intronic	CADPS2	NA	NA	NA	ncRNA_intronic	ENSG00000240499	NA	NA	NA	Score=745;Name=lod=1422	NA	7q31.32	Score=1000;Name=V$SRY_01	NA	NA	NA	rs2074588	0.32	0.32	0.3	0.31889	0.3062	0.3869	0.3948	0.2436	0.3098	0.29	0.42	0.39	0.21	0.3258	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.102771	4.102771	NA	0.316004	0.241629	NA	0.312	NA	5.3853293
1114	6	150210802	150210802	A	G	ncRNA_intronic	LOC100652739	NA	NA	NA	ncRNA_intronic	ENSG00000223701,ENSG00000268592	NA	NA	NA	NA	NA	6q25.1	NA	Name=c-Jun,Pol2(phosphoS2),GTF2F1_(RAP-74)	Name=19	NA	rs6933882	0.55	0.55	0.521	0.546326	0.4195	0.8859	0.5058	0.4554	0.4785	0.41	0.87	0.51	0.43	0.4612	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.138767	NA	NA	0.401395	0.455969	NA	0.587	NA	5.3845716
1114	1	207087435	207087435	C	T	exonic	FAIM3	NA	synonymous SNV	FAIM3:NM_001193338:exon2:c.G42A:p.S14S,FAIM3:NM_005449:exon2:c.G42A:p.S14S	exonic	ENSG00000162894	NA	synonymous SNV	ENSG00000162894:ENST00000367091:exon2:c.G42A:p.S14S,ENSG00000162894:ENST00000420007:exon2:c.G42A:p.S14S,ENSG00000162894:ENST00000463473:exon2:c.G42A:p.S14S,ENSG00000162894:ENST00000525793:exon3:c.G42A:p.S14S,ENSG00000162894:ENST00000529560:exon3:c.G42A:p.S14S,ENSG00000162894:ENST00000530505:exon3:c.G135A:p.S45S	NA	NA	1q32.1	NA	NA	Name=2	NA	rs167082	0.3	0.3	0.278	0.244209	0.4543	0.1339	0.3069	0.1717	0.1953	0.45	0.14	0.36	0.19	0.3624	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.630756	NA	NA	0.46593	0.20177	NA	0.399	NA	5.3840366
1114	20	61464440	61464440	G	A	intronic	COL9A3	NA	NA	NA	intronic	ENSG00000092758	NA	NA	NA	NA	NA	20q13.33	NA	Name=Pol2	Name=8	NA	rs1018440	0.23	0.23	0.229	0.241414	0.2177	0.0496	0.183	0.5499	0.0879	0.21	0.06	0.19	0.49	0.1917	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.070837	NA	NA	0.206676	0.483878	NA	0.167	NA	5.383924
1114	4	48412997	48412997	C	T	intronic	SLAIN2	NA	NA	NA	intronic	ENSG00000109171	NA	NA	NA	NA	NA	4p11	NA	Name=NANOG_(SC-33759)	Name=3	NA	rs6836010	0.48	0.48	0.465	0.51258	0.6163	0.5069	0.4755	0.3177	0.7014	0.61	0.46	0.47	0.32	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.253425	NA	NA	NA	NA	NA	0.514	NA	5.3837
1114	12	94942223	94942223	T	C	intergenic	LOC144486,MIR5700	dist=85879;dist=13342	NA	NA	ncRNA_exonic	ENSG00000236349	NA	NA	NA	Score=638;Name=lod=523	NA	12q22	NA	Name=CTCF	NA	NA	rs7139313	0.72	0.72	0.715	0.725839	0.6163	0.879	0.7421	0.7436	0.6452	0.61	0.88	0.72	0.72	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.592609	NA	NA	NA	NA	NA	0.71	NA	5.3837
1114	6	38841101	38841101	G	A	exonic	DNAH8	NA	synonymous SNV	DNAH8:NM_001206927:exon52:c.G7569A:p.K2523K	exonic	ENSG00000124721	NA	synonymous SNV	ENSG00000124721:ENST00000441566:exon47:c.G6810A:p.K2270K,ENSG00000124721:ENST00000359357:exon50:c.G6918A:p.K2306K,ENSG00000124721:ENST00000327475:exon51:c.G7533A:p.K2511K,ENSG00000124721:ENST00000449981:exon52:c.G7569A:p.K2523K	Score=363;Name=lod=40	NA	6p21.2	NA	NA	NA	NA	rs9380795	0.53	0.53	0.505	0.533347	0.3767	0.8333	0.6138	0.3601	0.5624	0.38	0.83	0.57	0.39	0.4782	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.496995	NA	NA	0.42814	0.359283	NA	0.601	NA	5.3836266
1114	13	25507339	25507339	T	A	ncRNA_exonic	TPTE2P1	NA	NA	NA	ncRNA_intronic	ENSG00000253771	NA	NA	NA	NA	NA	13q12.13	NA	NA	Name=2	NA	rs8002258	0.27	0.27	0.237	0.249201	0.2833	0.2272	0.3732	0.1906	0.228	0.3	0.26	0.37	0.14	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.69625	NA	NA	NA	NA	NA	0.239	NA	5.3833666
1114	13	25507354	25507354	A	G	ncRNA_exonic	TPTE2P1	NA	NA	NA	ncRNA_intronic	ENSG00000253771	NA	NA	NA	NA	NA	13q12.13	NA	NA	Name=2	NA	rs7997570	0.27	0.27	0.235	0.249201	0.2833	0.2272	0.3732	0.1906	0.228	0.3	0.26	0.37	0.14	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.012352	NA	NA	NA	NA	NA	0.239	NA	5.3833666
1114	17	21731041	21731041	G	A	intergenic	C17orf51,FAM27L	dist=276100;dist=94329	NA	NA	exonic	ENSG00000263563	NA	nonsynonymous SNV	ENSG00000263563:ENST00000578713:exon1:c.G343A:p.D115N,ENSG00000263563:ENST00000584755:exon2:c.G343A:p.D115N	Score=861;Name=lod=4226	NA	17p11.2	NA	NA	NA	NA	rs145087783	0.18	0.18	0.134	0.183706	0.2406	0.1587	0.1628	0.0764	0.3108	0.24	0.16	0.21	0.09	0.2102	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.047866	NA	NA	NA	NA	NA	0.159	NA	5.3825334
1114	5	141036337	141036337	A	G	exonic	ARAP3	NA	synonymous SNV	ARAP3:NM_022481:exon26:c.T3603C:p.A1201A	exonic	ENSG00000120318	NA	synonymous SNV	ENSG00000120318:ENST00000513878:exon20:c.T2589C:p.A863A,ENSG00000120318:ENST00000508305:exon25:c.T3096C:p.A1032A,ENSG00000120318:ENST00000239440:exon26:c.T3603C:p.A1201A	Score=623;Name=lod=454	NA	5q31.3	NA	NA	NA	NA	rs7703648	0.5	0.5	0.476	0.48143	0.4314	0.3889	0.4885	0.7065	0.319	0.44	0.41	0.49	0.68	0.4489	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.845926	NA	NA	0.40407	0.652065	ID=COSM149956;OCCURENCE=1(stomach)	0.551	NA	5.3822966
1114	19	9065510	9065510	G	A	exonic	MUC16	NA	synonymous SNV	MUC16:NM_024690:exon3:c.C21936T:p.F7312F	exonic	ENSG00000181143	NA	synonymous SNV	ENSG00000181143:ENST00000397910:exon3:c.C21936T:p.F7312F	NA	NA	19p13.2	NA	NA	NA	NA	rs1867692	0.17	0.17	0.175	0.180911	0.0895	0.2679	0.1196	0.2458	0.1411	0.09	0.3	0.11	0.2	0.1171	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.210073	NA	NA	0.078045	0.218993	NA	0.196	NA	5.3820216
1114	11	11374269	11374269	A	G	exonic	CSNK2A3	NA	nonsynonymous SNV	CSNK2A3:NM_001256686:exon1:c.T398C:p.I133T	exonic	ENSG00000254598	NA	nonsynonymous SNV	ENSG00000254598:ENST00000528848:exon1:c.T398C:p.I133T	NA	NA	11p15.3	NA	NA	NA	NA	rs2071460	0.45	0.45	0.429	0.420527	0.4791	0.5248	0.4553	0.1906	0.5389	0.5	0.54	0.48	0.24	0.4731	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.175569	NA	NA	NA	NA	ID=COSN405261;OCCURENCE=1(lung)	0.341	NA	5.3811334
1114	3	180630565	180630565	T	C	intronic	FXR1	NA	NA	NA	intronic	ENSG00000114416	NA	NA	NA	NA	NA	3q26.33	NA	Name=ETS1,TAF1,Pol2(b),POU2F2,Pol2(phosphoS2),YY1,Pol2,Pol2-4H8,TAF7_(SQ-8),YY1_(C-20),HEY1,NFKB,Oct-2,p300,TBP	Name=148	NA	rs1805579	0.14	0.14	0.128	0.165935	0.2068	0.1627	0.1527	0.0719	0.2638	0.19	0.11	0.17	0.07	0.1909	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.875573	NA	NA	0.221512	0.093963	NA	0.123	NA	5.380788
1114	5	79596274	79596274	C	T	ncRNA_exonic	LOC644936	NA	NA	NA	ncRNA_exonic	ENSG00000184188	NA	NA	NA	Score=859;Name=lod=4113	NA	5q14.1	NA	NA	NA	NA	rs35486429	0.35	0.35	0.347	0.34365	0.2863	0.3522	0.2997	0.4213	0.32	0.3	0.37	0.31	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.040962	NA	NA	NA	NA	NA	0.312	NA	5.3803666
1114	3	186501502	186501502	C	A	intronic	EIF4A2	NA	NA	NA	ncRNA_exonic	ENSG00000263826	NA	NA	NA	NA	NA	3q27.3	NA	Name=ZBTB33,POU2F2,ETS1,Pol2(b),GATA-1,TAF1,TR4,Pol2-4H8,KAP1,BCLAF1_(M33-P5B11),TAF7_(SQ-8),Sin3Ak-20,YY1_(C-20),Pol2(phosphoS2),NRSF,SP1,NELFe,Pol2,Oct-2,PAX5-C20,NFKB,ZEB1_(SC-25388),HEY1,BCL3,c-Myc,TBP,TCF12	Name=148	NA	rs266720	0.48	0.48	0.481	0.467053	0.4861	0.4504	0.4856	0.4561	0.4663	0.49	0.48	0.46	0.5	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.172279	NA	NA	0.467002	0.482659	NA	0.297	NA	5.3802313
1114	3	167506967	167506967	A	G	exonic	SERPINI1	NA	synonymous SNV	SERPINI1:NM_001122752:exon2:c.A51G:p.T17T,SERPINI1:NM_005025:exon2:c.A51G:p.T17T	exonic	ENSG00000163536	NA	synonymous SNV	ENSG00000163536:ENST00000295777:exon2:c.A51G:p.T17T,ENSG00000163536:ENST00000446050:exon2:c.A51G:p.T17T,ENSG00000163536:ENST00000472747:exon2:c.A51G:p.T17T,ENSG00000163536:ENST00000472941:exon2:c.A51G:p.T17T	NA	NA	3q26.1	NA	NA	NA	NA	rs34582040	0.11	0.11	0.107	0.114217	0.1004	0.0516	0.1542	0.2057	0.0409	0.1	0.06	0.12	0.2	0.098	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.253564	NA	NA	0.08814	0.198366	NA	0.116	NA	5.3801266
1114	22	50315973	50315973	G	C	exonic	CRELD2	NA	synonymous SNV	CRELD2:NM_001135101:exon6:c.G621C:p.P207P	exonic	ENSG00000184164	NA	synonymous SNV	ENSG00000184164:ENST00000404488:exon6:c.G621C:p.P207P	NA	NA	22q13.33	NA	NA	NA	NA	rs12160965	0.23	0.23	0.177	0.249401	0.1382	0.1181	0.134	0.5658	0.1534	0.15	0.12	0.15	0.55	0.0471	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.29333	NA	NA	0.101565	0.293282	NA	0.101	NA	5.3798016
1114	5	146435163	146435163	G	A	intronic	PPP2R2B	NA	NA	NA	intronic	ENSG00000156475	NA	NA	NA	Score=706;Name=lod=983	NA	5q32	Score=932;Name=V$IK2_01	NA	NA	NA	rs11958187	0.47	0.47	0.462	0.474042	0.6203	0.3165	0.5447	0.3767	0.5675	0.62	0.28	0.61	0.37	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.890616	2.890616	NA	NA	NA	ID=COSN167589;OCCURENCE=1(large_intestine)	0.522	NA	5.3797
1114	19	9070079	9070079	C	G	exonic	MUC16	NA	synonymous SNV	MUC16:NM_024690:exon3:c.G17367C:p.T5789T	exonic	ENSG00000181143	NA	synonymous SNV	ENSG00000181143:ENST00000397910:exon3:c.G17367C:p.T5789T	NA	NA	19p13.2	NA	NA	NA	NA	rs1559170	0.19	0.19	0.186	0.192891	0.0845	0.2679	0.1859	0.2602	0.1411	0.09	0.3	0.16	0.22	0.1248	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.577361	NA	NA	0.077772	0.229778	NA	0.203	NA	5.3795946
1114	6	32522679	32522679	G	C	ncRNA_exonic	HLA-DRB6	NA	NA	NA	ncRNA_exonic	ENSG00000229391	NA	NA	NA	Score=455;Name=lod=94	NA	6p21.32	NA	NA	NA	NA	rs112103446	NA	NA	NA	0.322085	0.2873	0.2976	0.2709	0.4327	0.2699	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.059309	NA	NA	NA	NA	NA	NA	NA	5.3793666
1114	15	76031587	76031587	G	T	ncRNA_intronic	DNM1P35	NA	NA	NA	ncRNA_intronic	ENSG00000260288	NA	NA	NA	NA	NA	15q24.2	NA	Name=YY1,YY1_(C-20)	NA	NA	rs4886457	0.28	0.28	0.299	0.303714	0.2873	0.4048	0.2939	0.1127	0.4816	0.28	0.41	0.28	0.12	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.46032	NA	NA	NA	NA	NA	0.239	NA	5.3793666
1114	1	118583408	118583408	G	A	exonic	SPAG17	NA	synonymous SNV	SPAG17:NM_206996:exon22:c.C3111T:p.Y1037Y	exonic	ENSG00000155761	NA	synonymous SNV	ENSG00000155761:ENST00000336338:exon22:c.C3111T:p.Y1037Y	Score=487;Name=lod=127	NA	1p12	NA	NA	NA	NA	rs10923477	0.29	0.29	0.266	0.288538	0.4324	0.1567	0.4135	0.1573	0.365	0.44	0.12	0.44	0.15	0.3988	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.482345	NA	NA	0.456163	0.202905	NA	0.406	NA	5.3793036
1114	4	190862287	190862287	C	T	intronic	FRG1	NA	NA	NA	intronic	ENSG00000109536	NA	NA	NA	NA	NA	4q35.2	NA	Name=TBP,THAP1_(SC-98174),PAX5-C20,Sin3Ak-20,SP1,Pol2,Egr-1	Name=20	NA	rs4145517	0.29	0.29	0.271	0.265775	0.3221	0.2748	0.2176	0.2345	0.2751	0.33	0.27	0.28	0.28	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.897559	NA	NA	0.298615	0.24711	NA	0.101	NA	5.379285
1114	2	224862821	224862821	C	T	intronic	SERPINE2	NA	NA	NA	intronic	ENSG00000135919	NA	NA	NA	NA	NA	2q36.1	NA	Name=HNF4G_(SC-6558),RXRA,CEBPB,p300,HNF4A_(H-171),JunD,HDAC2_(SC-6296),SP1,HNF4A	Name=29	NA	rs3795879	0.28	0.28	0.292	0.286342	0.2028	0.129	0.2248	0.587	0.1718	0.19	0.13	0.26	0.59	0.215	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.277312	NA	NA	0.203023	0.513618	NA	0.246	NA	5.379177
1114	2	206565500	206565500	C	T	intronic	NRP2	NA	NA	NA	intronic	ENSG00000118257	NA	NA	NA	NA	NA	2q33.3	NA	Name=SP1,GATA-2,FOSL2,MafF_(M8194),POU2F2,p300,FOXA1_(SC-101058),GR,Oct-2	Name=117	NA	rs3771051	0.13	0.13	0.121	0.112819	0.2207	0.0446	0.1427	0.0772	0.0992	0.21	0.05	0.15	0.09	0.1685	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.999749	1.999749	NA	0.232295	0.079909	NA	0.116	NA	5.378505
1114	5	64919877	64919877	C	G	intronic	TRIM23	NA	NA	NA	intronic	ENSG00000113595	NA	NA	NA	NA	NA	5q12.3	NA	Name=CTCF,ZBTB7A_(SC-34508),Rad21	Name=5	NA	rs462907	0.63	0.63	0.65	0.66853	0.6223	0.4147	0.5375	0.9561	0.682	0.64	0.41	0.56	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.760091	NA	NA	NA	NA	NA	0.826	NA	5.3777
1114	21	43496017	43496017	C	G	intronic	UMODL1	NA	NA	NA	intronic	ENSG00000177398	NA	NA	NA	NA	NA	21q22.3	NA	Name=Rad21,CTCF,CTCF_(SC-5916)	Name=4	NA	rs220285	0.48	0.48	0.48	0.44988	0.6223	0.1677	0.5014	0.5197	0.4325	0.64	0.2	0.52	0.51	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.138437	NA	NA	NA	NA	NA	0.377	NA	5.3777
1114	16	716287	716287	C	A	exonic	WDR90	NA	synonymous SNV	WDR90:NM_145294:exon37:c.C4677A:p.T1559T	exonic	ENSG00000161996	NA	synonymous SNV	ENSG00000161996:ENST00000315764:exon3:c.C474A:p.T158T,ENSG00000161996:ENST00000547944:exon3:c.C474A:p.T158T,ENSG00000161996:ENST00000293879:exon37:c.C4677A:p.T1559T,ENSG00000161996:ENST00000549091:exon37:c.C4683A:p.T1561T	NA	NA	16p13.3	NA	NA	NA	NA	rs9934288	0.16	0.16	0.124	0.166534	0.0765	0.3065	0.1412	0.1815	0.1125	0.06	0.31	0.09	0.17	0.1238	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.036565	NA	NA	0.0887	0.150493	NA	0.101	NA	5.3776666
1114	6	57512510	57512510	T	G	exonic	PRIM2	NA	unknown	UNKNOWN	UTR3	ENSG00000146143	ENST00000607273:c.*297T>G	NA	NA	Score=516;Name=lod=166	NA	6p11.2	Score=756;Name=V$MEF2_04	NA	NA	NA	rs4294007	NA	NA	NA	0.629193	0.5905	0.4514	0.5115	0.8275	0.6677	NA	NA	NA	NA	0.6987	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.521173	2.521173	1	NA	NA	NA	0.688	NA	5.3774667
1114	14	107083126	107083126	T	A	intergenic	LINC00221,NONE	dist=131597;dist=NONE	NA	NA	intronic	ENSG00000224373	NA	NA	NA	NA	NA	14q32.33	NA	Name=TCF12,CTCF_(C-20),ZNF263,CTCF_(SC-5916),CTCF,Rad21,CTCFL_(SC-98982),Znf143_(16618-1-AP)	Name=31	NA	rs11628176	0.33	0.33	0.274	0.39996	0.2893	0.373	0.3415	0.3843	0.6043	0.27	0.38	0.34	0.37	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.374699	NA	NA	NA	NA	NA	0.13	NA	5.3773667
1114	13	31725260	31725260	A	G	exonic	HSPH1	NA	synonymous SNV	HSPH1:NM_006644:exon7:c.T732C:p.F244F	exonic	ENSG00000120694	NA	synonymous SNV	ENSG00000120694:ENST00000429785:exon5:c.T189C:p.F63F,ENSG00000120694:ENST00000380406:exon6:c.T609C:p.F203F,ENSG00000120694:ENST00000320027:exon7:c.T732C:p.F244F,ENSG00000120694:ENST00000380405:exon7:c.T732C:p.F244F,ENSG00000120694:ENST00000445273:exon7:c.T738C:p.F246F	Score=538;Name=lod=205	NA	13q12.3	NA	NA	NA	NA	rs11556147	0.27	0.27	0.28	0.225839	0.4642	0.0109	0.2723	0.2451	0.1431	0.47	0.0017	0.3	0.26	0.3529	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.541932	NA	NA	0.472209	0.286201	NA	0.326	NA	5.3773576
1114	13	31729729	31729729	A	G	exonic	HSPH1	NA	synonymous SNV	HSPH1:NM_006644:exon3:c.T228C:p.N76N	exonic	ENSG00000120694	NA	synonymous SNV	ENSG00000120694:ENST00000320027:exon3:c.T228C:p.N76N,ENSG00000120694:ENST00000380405:exon3:c.T228C:p.N76N,ENSG00000120694:ENST00000380406:exon3:c.T228C:p.N76N,ENSG00000120694:ENST00000445273:exon3:c.T234C:p.N78N,ENSG00000120694:ENST00000602786:exon3:c.T228C:p.N76N	Score=617;Name=lod=431	NA	13q12.3	NA	NA	NA	NA	rs1047086	0.27	0.27	0.284	0.225839	0.4642	0.0109	0.2723	0.2451	0.1431	0.47	0.0017	0.3	0.26	0.3527	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.100592	NA	NA	0.472442	0.286201	NA	0.326	NA	5.3773246
1114	17	78820212	78820212	G	A	intronic	RPTOR	NA	NA	NA	intronic	ENSG00000141564	NA	NA	NA	NA	NA	17q25.3	NA	Name=TCF12,CTCF_(C-20),CTCF	Name=9	NA	rs3829572	0.44	0.44	0.413	0.423123	0.6233	0.4306	0.5259	0.0825	0.5971	0.64	0.41	0.54	0.11	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.065863	NA	NA	NA	NA	NA	0.435	NA	5.3767
1114	5	96129512	96129512	A	G	exonic	ERAP1	NA	synonymous SNV	ERAP1:NM_001040458:exon6:c.T1068C:p.A356A,ERAP1:NM_001198541:exon6:c.T1068C:p.A356A,ERAP1:NM_016442:exon6:c.T1068C:p.A356A	exonic	ENSG00000164307	NA	synonymous SNV	ENSG00000164307:ENST00000296754:exon6:c.T1068C:p.A356A,ENSG00000164307:ENST00000443439:exon6:c.T1068C:p.A356A	NA	Name=Ankylosing spondylitis	5q15	Score=841;Name=V$RORA2_01	NA	NA	NA	rs27434	0.65	0.65	0.63	0.650759	0.7883	0.5456	0.7118	0.5825	0.6667	0.79	0.51	0.7	0.55	0.7221	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.169317	NA	NA	0.779651	0.602587	NA	0.674	NA	5.3766156
1114	22	24036563	24036563	G	A	exonic	RGL4	NA	synonymous SNV	RGL4:NM_153615:exon5:c.G942A:p.S314S	exonic	ENSG00000159496	NA	synonymous SNV	ENSG00000159496:ENST00000290691:exon5:c.G942A:p.S314S,ENSG00000159496:ENST00000423392:exon5:c.G942A:p.S314S,ENSG00000159496:ENST00000401461:exon6:c.G534A:p.S178S,ENSG00000159496:ENST00000441897:exon7:c.G942A:p.S314S	NA	NA	22q11.23	NA	NA	NA	NA	rs2070447	0.13	0.13	0.117	0.11881	0.0915	0.2798	0.1009	0.0113	0.1391	0.11	0.27	0.09	0.01	0.1124	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.190708	NA	NA	0.086163	0.029051	NA	0.123	NA	5.3766036
1114	2	68415767	68415767	G	A	exonic	PPP3R1	NA	synonymous SNV	PPP3R1:NM_000945:exon3:c.C99T:p.D33D	exonic	ENSG00000221823	NA	synonymous SNV	ENSG00000221823:ENST00000234310:exon3:c.C99T:p.D33D,ENSG00000221823:ENST00000409377:exon3:c.C69T:p.D23D,ENSG00000221823:ENST00000409752:exon3:c.C156T:p.D52D,ENSG00000221823:ENST00000406334:exon4:c.C69T:p.D23D	Score=745;Name=lod=1423	NA	2p14	NA	NA	NA	NA	rs687	0.49	0.49	0.457	0.515575	0.4195	0.494	0.4798	0.5227	0.6524	0.43	0.5	0.51	0.55	0.4761	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.081082	NA	NA	0.394569	0.481957	NA	0.406	NA	5.3764976
1114	6	29912852	29912852	T	C	exonic	HLA-A	NA	synonymous SNV	HLA-A:NM_001242758:exon6:c.T1029C:p.S343S,HLA-A:NM_002116:exon6:c.T1029C:p.S343S	exonic	ENSG00000206503	NA	synonymous SNV	ENSG00000206503:ENST00000376806:exon6:c.T1047C:p.S349S,ENSG00000206503:ENST00000376809:exon6:c.T1029C:p.S343S,ENSG00000206503:ENST00000396634:exon8:c.T1029C:p.S343S	NA	NA	6p22.1	NA	Name=Pol2-4H8	NA	NA	rs1137296	0.65	0.65	0.512	0.686502	0.6342	0.6885	0.7752	0.73	0.6166	0.58	0.69	0.72	0.66	0.6564	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.135527	NA	NA	NA	NA	NA	0.536	NA	5.3760666
1114	12	122079441	122079441	T	C	exonic	ORAI1	NA	synonymous SNV	ORAI1:NM_032790:exon2:c.T804C:p.T268T	exonic	ENSG00000182500	NA	synonymous SNV	ENSG00000182500:ENST00000330079:exon2:c.T804C:p.T268T	Score=515;Name=lod=165	NA	12q24.31	NA	NA	NA	NA	rs3825175	0.53	0.53	0.517	0.555711	0.3976	0.5823	0.4755	0.7269	0.5164	0.4	0.58	0.46	0.74	0.4733	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.457777	NA	NA	0.419849	0.698308	NA	0.587	NA	5.3759176
1114	1	109735298	109735298	T	C	exonic	KIAA1324	NA	synonymous SNV	KIAA1324:NM_001267049:exon6:c.T699C:p.G233G,KIAA1324:NM_001267048:exon12:c.T1488C:p.G496G,KIAA1324:NM_020775:exon14:c.T1749C:p.G583G	exonic	ENSG00000116299	NA	synonymous SNV	ENSG00000116299:ENST00000529753:exon12:c.T1488C:p.G496G,ENSG00000116299:ENST00000457623:exon13:c.T1599C:p.G533G,ENSG00000116299:ENST00000369939:exon14:c.T1749C:p.G583G	NA	NA	1p13.3	NA	Name=ELF1_(SC-631)	Name=14	NA	rs658779	0.75	0.75	0.713	0.741613	0.7565	0.999	0.8055	0.3593	0.9325	0.78	1	0.8	0.39	0.7832	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.019141	NA	NA	0.751512	0.411938	NA	0.761	NA	5.3754546
1114	19	11406952	11406952	A	G	UTR5	TSPAN16	NM_012466:c.-22A>G	NA	NA	UTR5	ENSG00000130167	ENST00000316737:c.-22A>G,ENST00000592955:c.-22A>G,ENST00000590327:c.-22A>G,ENST00000337994:c.-22A>G	NA	NA	NA	NA	19p13.2	NA	Name=CEBPB	Name=29	NA	rs374409	0.42	0.42	0.429	0.45028	0.2932	0.2718	0.3473	0.848	0.3313	0.29	0.26	0.36	0.83	0.3576	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.810264	NA	NA	0.307209	0.771902	ID=COSN165729;OCCURENCE=1(breast)	0.565	NA	5.3753244
1114	19	15838967	15838967	G	A	exonic	OR10H2	NA	synonymous SNV	OR10H2:NM_013939:exon1:c.G114A:p.T38T	exonic	ENSG00000171942	NA	synonymous SNV	ENSG00000171942:ENST00000305899:exon1:c.G114A:p.T38T	Score=483;Name=lod=123	NA	19p13.12	NA	NA	NA	NA	rs2285955	0.36	0.36	0.374	0.350439	0.4394	0.3135	0.3112	0.233	0.4836	0.45	0.34	0.32	0.28	0.4047	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.29784	1.29784	NA	0.447301	0.27803	NA	0.384	NA	5.3752656
1115	1	119157909	119157909	C	T	intergenic	SPAG17,TBX15	dist=430061;dist=267757	NA	NA	ncRNA_exonic	ENSG00000226126	NA	NA	NA	Score=838;Name=lod=3396	NA	1p12	NA	Name=MafK_(SC-477),MafF_(M8194),MafK_(ab50322)	NA	NA	rs1009458	0.62	0.62	0.643	0.616014	0.6252	0.3958	0.6643	0.8306	0.5092	0.62	0.43	0.65	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.214593	NA	NA	NA	NA	NA	0.783	NA	5.3748
1115	1	205589574	205589574	C	T	exonic	ELK4	NA	synonymous SNV	ELK4:NM_001973:exon3:c.G600A:p.P200P,ELK4:NM_021795:exon3:c.G600A:p.P200P	exonic	ENSG00000158711	NA	synonymous SNV	ENSG00000158711:ENST00000289703:exon3:c.G600A:p.P200P,ENSG00000158711:ENST00000357992:exon3:c.G600A:p.P200P	NA	NA	1q32.1	NA	NA	NA	NA	rs1064406	0.15	0.15	0.135	0.195887	0.0706	0.37	0.1153	0.146	0.2699	0.07	0.32	0.09	0.12	0.1306	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.159032	NA	NA	0.090698	0.130277	NA	0.145	NA	5.3747686
1115	11	4929061	4929061	C	G	exonic	OR51A7	NA	synonymous SNV	OR51A7:NM_001004749:exon1:c.C462G:p.L154L	exonic	ENSG00000176895	NA	synonymous SNV	ENSG00000176895:ENST00000359350:exon1:c.C462G:p.L154L	NA	NA	11p15.4	NA	NA	NA	NA	rs10500627	0.21	0.21	0.206	0.177915	0.0845	0.5437	0.1527	0.0613	0.0726	0.09	0.55	0.13	0.08	0.1299	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.256828	NA	NA	0.077827	0.076102	ID=COSM147113;OCCURENCE=1(stomach)	0.072	NA	5.3744396
1115	7	100550245	100550245	G	A	intergenic	ACHE,MUC12	dist=56704;dist=62659	NA	NA	exonic	ENSG00000228273	NA	nonsynonymous SNV	ENSG00000228273:ENST00000379458:exon2:c.G826A:p.A276T	NA	NA	7q22.1	NA	NA	NA	NA	rs66732041	NA	NA	NA	0.0213658	NA	NA	0.0029	0.0787	0.001	NA	NA	NA	NA	0.4601	0.054	1	T	.	.	.	.	.	.	.	.	-0.345	N	.	.	-0.964	T	0.028	T	0.057	-0.604	1.305	-0.711	-0.690	-0.148	4.816	-0.603875	NA	0.72	NA	NA	ID=COSM304008;OCCURENCE=1(central_nervous_system)	0.043	NA	5.3732334
1115	17	67519542	67519542	G	A	intronic	MAP2K6	NA	NA	NA	intronic	ENSG00000108984	NA	NA	NA	NA	NA	17q24.3	NA	Name=CEBPB,CTCF,Rad21,YY1_(C-20),SMC3_(ab9263),CTCF_(C-20),CTCF_(SC-5916),RFX5_(N-494),YY1	Name=132	NA	rs2251160	0.58	0.58	0.594	0.585863	0.6272	0.4722	0.4712	0.7118	0.5716	0.62	0.46	0.5	0.72	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.555192	NA	NA	NA	NA	NA	0.652	NA	5.3728
1115	19	3762926	3762926	G	A	intronic	MRPL54	NA	NA	NA	intronic	ENSG00000183617	NA	NA	NA	NA	NA	19p13.3	NA	Name=E2F4,Pol2,Pol2(b),Pol2-4H8,NFKB,HEY1,Nrf1	Name=148	NA	rs7245624	0.61	0.61	0.592	0.595248	0.6272	0.6647	0.5865	0.4697	0.6667	0.63	0.67	0.6	0.49	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.704926	1.704926	NA	NA	NA	NA	0.551	NA	5.3728
1115	1	229461024	229461024	C	T	exonic	CCSAP	NA	synonymous SNV	CCSAP:NM_145257:exon4:c.G771A:p.P257P	exonic	ENSG00000154429	NA	synonymous SNV	ENSG00000154429:ENST00000366686:exon3:c.G429A:p.P143P,ENSG00000154429:ENST00000366687:exon3:c.G771A:p.P257P,ENSG00000154429:ENST00000284617:exon4:c.G771A:p.P257P	NA	NA	1q42.13	Score=788;Name=V$ROAZ_01	NA	NA	NA	rs2282083	0.39	0.39	0.345	0.358826	0.4493	0.3859	0.5101	0.2126	0.3282	0.44	0.42	0.51	0.19	0.4124	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.926681	NA	NA	0.432907	0.24739	NA	0.37	NA	5.3720596
1115	4	110384790	110384790	A	G	exonic	SEC24B	NA	synonymous SNV	SEC24B:NM_001042734:exon2:c.A867G:p.P289P,SEC24B:NM_006323:exon2:c.A867G:p.P289P	exonic	ENSG00000138802	NA	synonymous SNV	ENSG00000138802:ENST00000265175:exon2:c.A867G:p.P289P,ENSG00000138802:ENST00000399100:exon2:c.A867G:p.P289P,ENSG00000138802:ENST00000504968:exon3:c.A960G:p.P320P	NA	NA	4q25	NA	NA	NA	NA	rs33911248	0.07	0.07	0.073	0.0708866	0.0934	NA	0.0591	0.1051	0.0828	0.09	NA	0.06	0.11	0.0948	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.44626	NA	NA	0.106444	0.120638	NA	0.116	NA	5.3720226
1115	1	26607123	26607123	C	T	intronic	SH3BGRL3	NA	NA	NA	intronic	ENSG00000142669	NA	NA	NA	NA	NA	1p36.11	NA	Name=eGFP-JunD,c-Jun,NRSF,ZBTB7A_(SC-34508),FOSL1_(SC-183)	Name=65	NA	rs12759434	0.46	0.46	0.457	0.392772	0.6282	0.3085	0.402	0.3525	0.2853	0.63	0.3	0.44	0.4	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.715985	1.715985	NA	NA	NA	NA	0.297	NA	5.3718
1115	15	22414262	22414262	C	T	ncRNA_exonic	OR4N3P	NA	NA	NA	ncRNA_exonic	ENSG00000259435	NA	NA	NA	Score=259;Name=lod=15	NA	15q11.2	NA	NA	NA	NA	rs1429510	NA	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2951	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.049201	NA	NA	NA	NA	NA	0.123	NA	5.3715666
1115	15	101093767	101093767	C	T	ncRNA_exonic	PRKXP1	NA	NA	NA	ncRNA_exonic	ENSG00000259205	NA	NA	NA	Score=624;Name=lod=456	NA	15q26.3	NA	NA	NA	NA	rs62037117	0.23	0.23	0.225	0.246006	0.2952	0.0694	0.2003	0.3563	0.2607	0.28	0.07	0.23	0.36	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.091257	NA	NA	NA	NA	NA	0.319	NA	5.3714666
1115	15	101094174	101094174	C	T	ncRNA_exonic	PRKXP1	NA	NA	NA	ncRNA_exonic	ENSG00000259205	NA	NA	NA	Score=686;Name=lod=817	NA	15q26.3	NA	NA	NA	NA	rs35852295	0.25	0.25	0.232	0.257388	0.2952	0.0694	0.2003	0.3986	0.2618	0.28	0.07	0.23	0.4	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.205366	NA	NA	NA	NA	NA	0.319	NA	5.3714666
1115	11	18633971	18633971	G	A	exonic	SPTY2D1	NA	synonymous SNV	SPTY2D1:NM_194285:exon4:c.C1776T:p.D592D	exonic	ENSG00000179119	NA	synonymous SNV	ENSG00000179119:ENST00000336349:exon4:c.C1776T:p.D592D	Score=551;Name=lod=231	NA	11p15.1	NA	NA	NA	NA	rs11605097	0.33	0.33	0.279	0.308307	0.4195	0.3472	0.451	0.0794	0.362	0.43	0.33	0.47	0.1	0.4153	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.237856	NA	NA	0.460401	0.138017	NA	0.203	NA	5.3714656
1115	16	30018500	30018500	C	T	exonic	DOC2A	NA	synonymous SNV	DOC2A:NM_003586:exon6:c.G648A:p.Q216Q	exonic	ENSG00000149927	NA	synonymous SNV	ENSG00000149927:ENST00000350119:exon6:c.G648A:p.Q216Q,ENSG00000149927:ENST00000564979:exon6:c.G648A:p.Q216Q,ENSG00000149927:ENST00000565273:exon6:c.G648A:p.Q216Q,ENSG00000149927:ENST00000566310:exon6:c.G294A:p.Q98Q,ENSG00000149927:ENST00000564944:exon7:c.G648A:p.Q216Q	Score=597;Name=lod=355	NA	16p11.2	NA	NA	NA	NA	rs3935873	0.34	0.34	0.311	0.349241	0.4414	0.378	0.3141	0.1573	0.5092	0.44	0.36	0.34	0.15	0.4095	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.976389	1.976389	NA	0.444535	0.176149	NA	0.362	NA	5.3712316
1115	8	133759318	133759318	A	G	exonic	TMEM71	NA	synonymous SNV	TMEM71:NM_001145153:exon5:c.T357C:p.S119S	exonic	ENSG00000165071	NA	synonymous SNV	ENSG00000165071:ENST00000519016:exon4:c.T66C:p.S22S,ENSG00000165071:ENST00000522334:exon4:c.T66C:p.S22S,ENSG00000165071:ENST00000377901:exon5:c.T357C:p.S119S,ENSG00000165071:ENST00000523829:exon5:c.T357C:p.S119S	NA	NA	8q24.22	NA	NA	NA	NA	rs74775484	0.05	0.05	0.047	0.0419329	0.0974	NA	0.0937	0.0076	0.0378	0.09	0.0017	0.11	0.01	0.0786	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.550915	NA	NA	0.119651	0.018611	ID=COSM1551796;OCCURENCE=1(lung)	0.094	NA	5.3710156
1115	22	23104867	23104867	G	A	intergenic	GGTLC2,MIR650	dist=114499;dist=60403	NA	NA	ncRNA_exonic	ENSG00000253590	NA	NA	NA	NA	NA	22q11.22	NA	Name=ZNF263,GATA-2	Name=4	NA	rs12158233	0.69	0.69	0.698	0.688898	0.6292	0.8631	0.6744	0.6135	0.683	0.62	0.87	0.64	0.63	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.126253	NA	NA	NA	NA	NA	0.551	NA	5.3708
1115	8	144991176	144991176	T	C	exonic	PLEC	NA	synonymous SNV	PLEC:NM_201378:exon32:c.A12771G:p.S4257S,PLEC:NM_201379:exon32:c.A12747G:p.S4249S,PLEC:NM_201380:exon32:c.A13224G:p.S4408S,PLEC:NM_201381:exon32:c.A12717G:p.S4239S,PLEC:NM_201382:exon32:c.A12813G:p.S4271S,PLEC:NM_201383:exon32:c.A12825G:p.S4275S,PLEC:NM_201384:exon32:c.A12813G:p.S4271S,PLEC:NM_000445:exon33:c.A12894G:p.S4298S	exonic	ENSG00000178209	NA	synonymous SNV	ENSG00000178209:ENST00000322810:exon32:c.A13224G:p.S4408S,ENSG00000178209:ENST00000345136:exon32:c.A12813G:p.S4271S,ENSG00000178209:ENST00000354589:exon32:c.A12813G:p.S4271S,ENSG00000178209:ENST00000354958:exon32:c.A12747G:p.S4249S,ENSG00000178209:ENST00000356346:exon32:c.A12771G:p.S4257S,ENSG00000178209:ENST00000357649:exon32:c.A12825G:p.S4275S,ENSG00000178209:ENST00000398774:exon32:c.A12717G:p.S4239S,ENSG00000178209:ENST00000527096:exon32:c.A12882G:p.S4294S,ENSG00000178209:ENST00000436759:exon33:c.A12894G:p.S4298S	NA	NA	8q24.3	NA	NA	NA	NA	rs6558405	0.45	0.45	0.479	0.478435	0.4423	0.1528	0.3746	0.9002	0.3548	0.43	0.17	0.4	0.87	0.419	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.202757	NA	NA	0.435013	0.83906	NA	0.551	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000078845.3;CLNDSDB=.;CLNDSDBID=.	5.3703536
1115	11	69957917	69957917	A	G	intronic	ANO1	NA	NA	NA	intronic	ENSG00000131620	NA	NA	NA	NA	NA	11q13.3	NA	Name=eGFP-JunD,ELF1_(SC-631),ERalpha_a,YY1,FOXA1_(C-20),TBP,HEY1	Name=97	NA	rs9666157	0.19	0.19	0.179	0.183506	0.2356	0.006	0.317	0.2678	0.1043	0.23	0.01	0.33	0.26	0.1871	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.184977	NA	NA	0.207285	0.231994	NA	0.239	NA	5.370015
1115	19	43371292	43371292	A	T	exonic	PSG1	NA	synonymous SNV	PSG1:NM_001184825:exon6:c.T1254A:p.V418V	exonic	ENSG00000231924	NA	synonymous SNV	ENSG00000231924:ENST00000403380:exon5:c.T975A:p.V325V,ENSG00000231924:ENST00000436291:exon6:c.T1254A:p.V418V	NA	NA	19q13.2	NA	NA	NA	NA	rs4030952	NA	NA	NA	0.287939	0.1083	0.4167	0.196	0.3124	0.3722	NA	NA	NA	NA	0.1891	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.708725	NA	NA	NA	NA	NA	NA	NA	5.3692666
1115	8	55104313	55104313	A	G	intergenic	MRPL15,SOX17	dist=43239;dist=266182	NA	NA	ncRNA_exonic	ENSG00000270980	NA	NA	NA	Score=609;Name=lod=398	NA	8q11.23	NA	NA	Name=18	NA	rs2013501	0.67	0.67	0.686	0.656949	0.6312	0.6081	0.5014	0.9107	0.501	0.64	0.58	0.54	0.91	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.009102	NA	NA	NA	NA	NA	0.688	NA	5.3688
1115	16	2161796	2161796	G	A	exonic	PKD1	NA	synonymous SNV	PKD1:NM_000296:exon15:c.C3372T:p.A1124A,PKD1:NM_001009944:exon15:c.C3372T:p.A1124A	exonic	ENSG00000008710	NA	synonymous SNV	ENSG00000008710:ENST00000262304:exon15:c.C3372T:p.A1124A,ENSG00000008710:ENST00000423118:exon15:c.C3372T:p.A1124A	NA	NA	16p13.3	NA	NA	NA	NA	rs75510884	0.11	0.11	0.079	0.114617	0.0944	NA	0.111	0.2935	0.0143	0.1	NA	0.12	0.27	0.1066	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.40158	NA	NA	0.096992	0.242459	NA	0.072	NA	5.3686746
1115	16	70602221	70602221	C	T	exonic	SF3B3	NA	synonymous SNV	SF3B3:NM_012426:exon22:c.C2988T:p.I996I	exonic	ENSG00000189091	NA	synonymous SNV	ENSG00000189091:ENST00000302516:exon22:c.C2988T:p.I996I	Score=593;Name=lod=344	NA	16q22.1	NA	NA	NA	NA	rs12909	0.46	0.46	0.457	0.506789	0.4155	0.5804	0.4193	0.4175	0.7076	0.4	0.58	0.44	0.42	0.4595	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.03097	NA	NA	0.423488	0.392857	ID=COSM148101;OCCURENCE=1(stomach)	0.558	NA	5.3681786
1115	16	2161793	2161793	G	A	exonic	PKD1	NA	synonymous SNV	PKD1:NM_000296:exon15:c.C3375T:p.S1125S,PKD1:NM_001009944:exon15:c.C3375T:p.S1125S	exonic	ENSG00000008710	NA	synonymous SNV	ENSG00000008710:ENST00000262304:exon15:c.C3375T:p.S1125S,ENSG00000008710:ENST00000423118:exon15:c.C3375T:p.S1125S	NA	NA	16p13.3	NA	NA	NA	NA	rs74331768	0.11	0.11	0.075	0.113618	0.0944	NA	0.111	0.2897	0.0143	0.1	NA	0.12	0.26	0.1078	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.627089	NA	NA	0.096293	0.239031	NA	0.072	NA	5.3681736
1115	5	141059868	141059868	T	C	exonic	ARAP3	NA	synonymous SNV	ARAP3:NM_022481:exon2:c.A186G:p.L62L	exonic	ENSG00000120318	NA	synonymous SNV	ENSG00000120318:ENST00000504448:exon1:c.A186G:p.L62L,ENSG00000120318:ENST00000239440:exon2:c.A186G:p.L62L	Score=440;Name=lod=82	NA	5q31.3	NA	NA	NA	NA	rs11167756	0.47	0.47	0.428	0.465655	0.4274	0.4683	0.4942	0.4493	0.5041	0.44	0.48	0.51	0.49	0.4516	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.598777	NA	NA	0.420116	0.444167	NA	0.333	NA	5.3675506
1115	9	75303653	75303653	C	T	exonic	TMC1	NA	synonymous SNV	TMC1:NM_138691:exon6:c.C45T:p.D15D	exonic	ENSG00000165091	NA	synonymous SNV	ENSG00000165091:ENST00000396237:exon2:c.C45T:p.D15D,ENSG00000165091:ENST00000340019:exon5:c.C45T:p.D15D,ENSG00000165091:ENST00000297784:exon6:c.C45T:p.D15D	NA	NA	9q21.13	NA	NA	NA	NA	rs2589615	0.51	0.51	0.533	0.510783	0.4085	0.4187	0.4496	0.77	0.4039	0.42	0.46	0.48	0.74	0.4609	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.332618	NA	NA	0.43	0.717431	NA	0.486	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000041144.1;CLNDSDB=.;CLNDSDBID=.	5.3672666
1115	1	109737063	109737063	C	T	exonic	KIAA1324	NA	synonymous SNV	KIAA1324:NM_001267049:exon7:c.C918T:p.N306N,KIAA1324:NM_001267048:exon13:c.C1707T:p.N569N,KIAA1324:NM_020775:exon15:c.C1968T:p.N656N	exonic	ENSG00000116299	NA	synonymous SNV	ENSG00000116299:ENST00000529753:exon13:c.C1707T:p.N569N,ENSG00000116299:ENST00000457623:exon14:c.C1818T:p.N606N,ENSG00000116299:ENST00000369939:exon15:c.C1968T:p.N656N	Score=504;Name=lod=149	NA	1p13.3	NA	NA	Name=22	NA	rs2359246	0.73	0.73	0.696	0.713658	0.7634	0.9702	0.7968	0.3033	0.8937	0.78	0.97	0.79	0.32	0.7772	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.257085	NA	NA	0.758953	0.368361	NA	0.754	NA	5.3671136
1115	18	12348285	12348285	T	C	exonic	AFG3L2	NA	synonymous SNV	AFG3L2:NM_006796:exon13:c.A1650G:p.E550E	exonic	ENSG00000141385	NA	synonymous SNV	ENSG00000141385:ENST00000269143:exon13:c.A1650G:p.E550E	Score=595;Name=lod=349	NA	18p11.21	NA	NA	NA	NA	rs11553521	0.71	0.71	0.726	0.709864	0.7674	0.6151	0.5937	0.7421	0.7873	0.77	0.64	0.62	0.79	0.7492	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.478333	NA	NA	0.78314	0.771675	ID=COSM148398;OCCURENCE=1(stomach)	0.667	CLINSIG=probable-non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000116249.2|RCV000123557.1;CLNDSDB=.|.;CLNDSDBID=.|.	5.3669266
1115	5	169129422	169129422	A	G	exonic	DOCK2	NA	synonymous SNV	DOCK2:NM_004946:exon14:c.A1374G:p.K458K	exonic	ENSG00000134516	NA	synonymous SNV	ENSG00000134516:ENST00000256935:exon14:c.A1374G:p.K458K,ENSG00000134516:ENST00000524185:exon14:c.A1374G:p.K458K	Score=369;Name=lod=42	NA	5q35.1	NA	NA	NA	NA	rs2306559	0.45	0.45	0.42	0.385383	0.4473	0.6815	0.3285	0.1982	0.3098	0.43	0.71	0.38	0.25	0.4067	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.978347	NA	NA	0.446628	0.237631	NA	0.384	NA	5.3660386
1115	11	18751041	18751041	C	T	exonic	PTPN5	NA	synonymous SNV	PTPN5:NM_001039970:exon14:c.G1467A:p.V489V,PTPN5:NM_006906:exon14:c.G1563A:p.V521V,PTPN5:NM_032781:exon14:c.G1563A:p.V521V	exonic	ENSG00000110786	NA	synonymous SNV	ENSG00000110786:ENST00000396166:exon2:c.G381A:p.V127V,ENSG00000110786:ENST00000477854:exon10:c.G975A:p.V325V,ENSG00000110786:ENST00000396168:exon13:c.G1491A:p.V497V,ENSG00000110786:ENST00000358540:exon14:c.G1563A:p.V521V,ENSG00000110786:ENST00000396167:exon14:c.G1467A:p.V489V,ENSG00000110786:ENST00000396170:exon14:c.G1467A:p.V489V,ENSG00000110786:ENST00000396171:exon14:c.G1563A:p.V521V	Score=559;Name=lod=249	NA	11p15.1	NA	NA	NA	NA	rs1550870	0.34	0.34	0.316	0.317492	0.4423	0.2619	0.3055	0.3185	0.2536	0.44	0.28	0.28	0.29	0.3992	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.244156	1.244156	NA	0.459469	0.3206	NA	0.326	NA	5.3656976
1115	3	169540397	169540397	T	C	exonic	LRRIQ4	NA	synonymous SNV	LRRIQ4:NM_001080460:exon1:c.T688C:p.L230L	exonic	ENSG00000188306	NA	synonymous SNV	ENSG00000188306:ENST00000340806:exon1:c.T688C:p.L230L	Score=259;Name=lod=15	NA	3q26.2	NA	NA	NA	NA	rs1920119	0.57	0.57	0.549	0.595647	0.4036	0.7579	0.6066	0.6679	0.5204	0.41	0.76	0.53	0.64	0.5005	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.537601	NA	NA	0.397059	0.607052	NA	0.514	NA	5.3655076
1115	2	112141781	112141781	T	G	ncRNA_intronic	LOC541471	NA	NA	NA	ncRNA_exonic	ENSG00000223973	NA	NA	NA	Score=843;Name=lod=3545	NA	2q13	NA	NA	NA	NA	rs62163546	NA	NA	0.185	0.259185	0.3012	0.0585	0.1931	0.4486	0.2137	NA	NA	NA	NA	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.502507	NA	NA	NA	NA	NA	0.348	NA	5.3654666
1115	18	67992684	67992684	C	T	exonic	SOCS6	NA	synonymous SNV	SOCS6:NM_004232:exon2:c.C780T:p.R260R	exonic	ENSG00000170677	NA	synonymous SNV	ENSG00000170677:ENST00000397942:exon2:c.C780T:p.R260R,ENSG00000170677:ENST00000582322:exon2:c.C780T:p.R260R	NA	NA	18q22.2	NA	NA	NA	NA	rs1047657	0.09	0.09	0.088	0.0766773	0.1044	0.0238	0.1455	0.0825	0.046	0.09	0.03	0.17	0.08	0.0917	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.022833	NA	NA	0.105233	0.104857	NA	0.116	NA	5.3653336
1115	1	15783222	15783222	C	T	upstream	CELA2A	NA	NA	NA	upstream	ENSG00000142615	NA	NA	NA	NA	NA	1p36.21	NA	Name=GATA-1,TAL1_(SC-12984),NRSF,Egr-1,GATA2_(CG2-96)	Name=4	NA	rs2303195	0.08	0.08	0.079	0.0754792	0.0934	0.0119	0.0764	0.1316	0.046	0.1	0.01	0.1	0.12	0.095	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.430271	NA	NA	0.113256	0.142079	NA	0.072	NA	5.3650106
1116	11	193722	193722	A	G	exonic	LOC653486,SCGB1C1	NA	synonymous SNV	LOC653486:NM_001097610:exon2:c.A66G:p.T22T,SCGB1C1:NM_145651:exon2:c.A66G:p.T22T	exonic	ENSG00000188076	NA	synonymous SNV	ENSG00000188076:ENST00000342878:exon2:c.A66G:p.T22T	NA	NA	11p15.5	NA	NA	NA	NA	rs2294082	0.24	0.24	0.181	NA	NA	NA	NA	NA	NA	0.15	0.39	0.23	0.22	0.2116	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.972866	NA	NA	0.090069	0.128388	NA	0.21	NA	5.3649976
1116	8	125551567	125551567	C	T	intronic	NDUFB9	NA	NA	NA	UTR5	ENSG00000147687	ENST00000523152:c.-280G>A	NA	NA	NA	NA	8q24.13	NA	Name=Pol2(b),YY1,Ini1,HA-E2F1,Pol2-4H8,NFKB,HEY1,TBP,TAF1,POU2F2,Pol2,YY1_(C-20),Oct-2,GTF2F1_(RAP-74)	Name=148	NA	rs7010411	0.28	0.28	0.262	0.309704	0.2614	0.3532	0.1542	0.2738	0.4734	0.28	0.33	0.18	0.3	0.2933	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.739016	2.739016	NA	0.247148	0.265	NA	0.21	NA	5.3648187
1116	5	79596175	79596175	T	C	ncRNA_exonic	LOC644936	NA	NA	NA	ncRNA_exonic	ENSG00000184188	NA	NA	NA	Score=859;Name=lod=4113	NA	5q14.1	NA	NA	NA	NA	rs11738835	0.1	0.1	0.1	0.0978435	0.16	NA	0.1153	0.1029	0.1155	0.16	NA	0.14	0.09	0.1425	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.078718	NA	NA	NA	NA	NA	0.08	NA	5.3641666
1116	3	42225951	42225951	G	T	intronic	TRAK1	NA	NA	NA	intronic	ENSG00000182606	NA	NA	NA	NA	NA	3p22.1	NA	Name=GATA-2,c-Jun	Name=40	NA	rs4682953	0.75	0.75	0.736	0.714657	0.6362	0.9484	0.7738	0.6316	0.6247	0.64	0.97	0.74	0.7	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.086865	NA	NA	NA	NA	NA	0.703	NA	5.3638
1116	11	64851305	64851305	C	T	intronic	CDCA5	NA	NA	NA	intronic	ENSG00000146670	NA	NA	NA	NA	NA	11q13.1	NA	Name=AP-2gamma,YY1,HA-E2F1,CTCF,Pol2,YY1_(C-20)	Name=3	NA	rs947799	0.45	0.45	0.408	0.414537	0.6362	0.2113	0.647	0.295	0.3926	0.64	0.21	0.65	0.28	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.202451	NA	NA	NA	NA	NA	0.435	NA	5.3638
1116	10	44126599	44126599	G	C	ncRNA_intronic	ZNF32-AS3	NA	NA	NA	ncRNA_exonic	ENSG00000238263	NA	NA	NA	Score=727;Name=lod=1205	NA	10q11.21	NA	NA	NA	NA	rs10793459	0.44	0.44	0.4	0.427117	0.3032	0.6538	0.389	0.3828	0.408	0.3	0.7	0.37	0.39	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.528568	NA	NA	NA	NA	NA	0.471	NA	5.3634666
1116	10	46968665	46968665	G	A	exonic	SYT15	NA	synonymous SNV	SYT15:NM_031912:exon3:c.C271T:p.L91L,SYT15:NM_181519:exon3:c.C271T:p.L91L	exonic	ENSG00000204176	NA	synonymous SNV	ENSG00000204176:ENST00000374323:exon2:c.C430T:p.L144L,ENSG00000204176:ENST00000374321:exon3:c.C271T:p.L91L,ENSG00000204176:ENST00000374325:exon3:c.C271T:p.L91L,ENSG00000204176:ENST00000503753:exon3:c.C271T:p.L91L	NA	NA	10q11.22	NA	NA	NA	NA	rs200814731	0.1	0.1	0.065	0.0936502	0.1282	0.0496	0.0764	0.1051	0.1002	0.12	0.04	0.1	0.12	0.1029	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.119615	NA	NA	0.072135	0.065115	ID=COSM1317459,COSM1317460,COSM1317461;OCCURENCE=1(ovary),3(haematopoietic_and_lymphoid_tissue),1(large_intestine)	0.138	NA	5.3634316
1116	6	116892839	116892839	C	T	intronic	RWDD1	NA	NA	NA	intronic	ENSG00000111832	NA	NA	NA	NA	NA	6q22.1	NA	Name=CTCF,STAT1,HEY1,Mxi1_(bHLH),Pol2,HA-E2F1,Pol2-4H8,ZNF263,TAF1,GATA-1,HMGN3	Name=3	NA	rs2295598	0.23	0.23	0.221	0.223442	0.2147	0.3522	0.2089	0.1172	0.2536	0.22	0.36	0.2	0.11	0.2272	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.205099	NA	NA	0.194775	0.125229	NA	0.225	NA	5.363325
1116	5	79596021	79596021	T	C	ncRNA_exonic	LOC644936	NA	NA	NA	ncRNA_exonic	ENSG00000184188	NA	NA	NA	Score=859;Name=lod=4113	NA	5q14.1	NA	NA	NA	NA	rs11738780	0.1	0.1	0.087	0.0978435	0.16	NA	0.1153	0.1029	0.1155	0.16	NA	0.14	0.09	0.1435	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.365434	NA	0	NA	NA	NA	0.08	NA	5.3631666
1116	17	20217375	20217375	G	A	exonic	SPECC1	NA	synonymous SNV	SPECC1:NM_001033555:exon13:c.G2961A:p.T987T,SPECC1:NM_001033553:exon15:c.G3204A:p.T1068T,SPECC1:NM_001243439:exon15:c.G3204A:p.T1068T	exonic	ENSG00000128487	NA	synonymous SNV	ENSG00000128487:ENST00000536879:exon12:c.G1224A:p.T408T,ENSG00000128487:ENST00000395530:exon13:c.G2961A:p.T987T,ENSG00000128487:ENST00000261503:exon15:c.G3204A:p.T1068T,ENSG00000128487:ENST00000395527:exon15:c.G3204A:p.T1068T	NA	NA	17p11.2	NA	NA	NA	NA	rs75296798	0.05	0.05	0.035	0.0371406	0.1024	NA	0.0836	0.0045	0.0194	0.11	NA	0.08	0.01	0.0807	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.148289	NA	NA	0.120581	0.022923	NA	0.08	NA	5.3629856
1116	12	124179417	124179417	T	C	exonic	TCTN2	NA	synonymous SNV	TCTN2:NM_001143850:exon10:c.T1125C:p.P375P,TCTN2:NM_024809:exon10:c.T1128C:p.P376P	exonic	ENSG00000168778	NA	synonymous SNV	ENSG00000168778:ENST00000303372:exon10:c.T1128C:p.P376P,ENSG00000168778:ENST00000426174:exon10:c.T1125C:p.P375P	NA	NA	12q24.31	NA	NA	NA	NA	rs7966867	0.44	0.44	0.443	0.482228	0.4185	0.1508	0.366	0.8744	0.4417	0.42	0.12	0.39	0.89	0.4387	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.095134	NA	NA	0.446628	0.817522	NA	0.413	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000114225.2;CLNDSDB=.;CLNDSDBID=.	5.3628386
1116	7	149019244	149019244	G	T	intergenic	LOC155060,ZNF777	dist=24841;dist=109210	NA	NA	upstream	ENSG00000231397	NA	NA	NA	NA	NA	7q36.1	NA	Name=TBP	Name=45	NA	rs2373521	0.09	0.09	0.061	0.0770767	0.1372	NA	0.1167	0.1036	0.0307	0.13	NA	0.13	0.1	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.434021	NA	NA	NA	NA	NA	0.145	NA	5.3628
1116	7	149019247	149019247	G	A	intergenic	LOC155060,ZNF777	dist=24844;dist=109207	NA	NA	upstream	ENSG00000231397	NA	NA	NA	NA	NA	7q36.1	NA	Name=TBP	Name=45	NA	rs2005318	0.09	0.09	0.059	0.0770767	0.1372	NA	0.1167	0.1036	0.0307	0.13	NA	0.13	0.09	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.409166	NA	NA	NA	NA	NA	0.145	NA	5.3628
1116	7	149019266	149019266	G	A	intergenic	LOC155060,ZNF777	dist=24863;dist=109188	NA	NA	upstream	ENSG00000231397	NA	NA	NA	NA	NA	7q36.1	NA	Name=TBP	Name=45	NA	rs1106814	0.09	0.09	0.054	0.0770767	0.1372	NA	0.1167	0.1036	0.0307	0.14	NA	0.14	0.09	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.456594	NA	NA	NA	NA	NA	0.145	NA	5.3628
1116	22	37771158	37771158	G	A	exonic	ELFN2	NA	synonymous SNV	ELFN2:NM_052906:exon3:c.C417T:p.I139I	exonic	ENSG00000166897	NA	synonymous SNV	ENSG00000166897:ENST00000349653:exon1:c.C417T:p.I139I,ENSG00000166897:ENST00000402918:exon3:c.C417T:p.I139I	Score=612;Name=lod=408	NA	22q13.1	NA	NA	NA	NA	rs2071857	0.45	0.45	0.42	0.417732	0.4274	0.3522	0.6556	0.4289	0.2914	0.43	0.37	0.6	0.44	0.4424	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.244675	NA	NA	0.434419	0.469814	NA	0.478	NA	5.3624476
1116	3	9828676	9828676	G	C	intronic	TADA3	NA	NA	NA	intronic	ENSG00000114026,ENSG00000171148	NA	NA	NA	NA	NA	3p25.3	NA	Name=Ini1,CTCF_(SC-5916),Pol2,YY1_(C-20),CTCF,FOXA1_(SC-101058),CTCF_(C-20)	Name=9	NA	rs7621556	0.29	0.29	0.257	0.295727	0.1809	0.5298	0.2839	0.1838	0.3323	0.18	0.51	0.29	0.21	0.251	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.102131	NA	NA	0.205698	0.184067	NA	0.239	NA	5.362402
1116	3	98252027	98252027	G	A	downstream	GPR15	NA	NA	NA	intronic	ENSG00000080819	NA	NA	NA	NA	NA	3q11.2	NA	Name=Pol2-4H8	Name=6	NA	rs1529047	0.54	0.54	0.501	0.52476	0.4712	0.7768	0.6138	0.2874	0.5777	0.49	0.81	0.57	0.29	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.195426	NA	NA	NA	NA	NA	0.399	NA	5.3621333
1116	16	74877693	74877693	A	G	intergenic	FA2H,WDR59	dist=68964;dist=29778	NA	NA	ncRNA_intronic	ENSG00000261458	NA	NA	NA	NA	NA	16q23.1	NA	Name=FOXA1_(C-20)	Name=13	NA	rs11149770	NA	NA	0.513	0.639776	0.6382	0.8462	0.732	0.379	0.7157	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.224155	NA	NA	NA	NA	NA	NA	NA	5.3618
1116	22	22707608	22707608	C	A	intergenic	LOC96610,ZNF280B	dist=30284;dist=131164	NA	NA	exonic	ENSG00000211647	NA	synonymous SNV	ENSG00000211647:ENST00000390293:exon2:c.C196A:p.R66R	NA	NA	22q11.22	NA	NA	NA	NA	NA	NA	NA	0.013	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.1384	0.054	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.105025	NA	NA	NA	NA	NA	0.101	NA	5.3616
1116	22	41569609	41569609	C	T	intronic	EP300	NA	NA	NA	ncRNA_intronic	ENSG00000232754	NA	NA	NA	Score=251;Name=lod=14	NA	22q13.2	NA	NA	NA	NA	rs2076578	0.29	0.29	0.287	0.264177	0.327	0.4712	0.2118	0.0439	0.3211	0.31	0.5	0.23	0.05	0.3085	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.829827	4.829827	NA	0.336279	0.105586	NA	0.217	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000079679.1;CLNDSDB=.;CLNDSDBID=.	5.3615543
1116	20	1629906	1629906	C	T	exonic	SIRPG	NA	synonymous SNV	SIRPG:NM_001039508:exon2:c.G222A:p.R74R,SIRPG:NM_018556:exon2:c.G222A:p.R74R,SIRPG:NM_080816:exon2:c.G222A:p.R74R	exonic	ENSG00000089012	NA	synonymous SNV	ENSG00000089012:ENST00000216927:exon2:c.G222A:p.R74R,ENSG00000089012:ENST00000303415:exon2:c.G222A:p.R74R,ENSG00000089012:ENST00000344103:exon2:c.G222A:p.R74R,ENSG00000089012:ENST00000381580:exon2:c.G123A:p.R41R,ENSG00000089012:ENST00000381583:exon2:c.G222A:p.R74R	NA	NA	20p13	NA	Name=EBF1_(C-8)	NA	NA	rs6079967	0.38	0.38	0.351	0.351637	0.4394	0.2708	0.5058	0.3064	0.2965	0.44	0.3	0.46	0.33	0.408	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.370319	NA	NA	0.458023	0.330685	ID=COSM149126;OCCURENCE=1(stomach)	0.471	NA	5.3612436
1116	12	6604415	6604415	T	G	intronic	NCAPD2	NA	NA	NA	intronic	ENSG00000010292	NA	NA	NA	NA	NA	12p13.31	NA	Name=CEBPB	Name=19	NA	rs11064231	0.11	0.11	0.088	0.107827	0.2097	0.0089	0.1354	0.025	0.1973	0.21	0.01	0.18	0.04	0.1936	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.916118	NA	NA	0.235698	0.056514	NA	0.087	NA	5.361002
1116	7	149019236	149019236	G	C	intergenic	LOC155060,ZNF777	dist=24833;dist=109218	NA	NA	upstream	ENSG00000231397	NA	NA	NA	NA	NA	7q36.1	NA	Name=TBP	Name=45	NA	rs2373522	0.1	0.1	0.061	0.0776757	0.1392	NA	0.1167	0.1044	0.0307	0.15	NA	0.14	0.1	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.482492	NA	NA	NA	NA	NA	0.145	NA	5.3608
1116	15	79298523	79298523	G	A	exonic	RASGRF1	NA	synonymous SNV	RASGRF1:NM_002891:exon15:c.C2119T:p.L707L	exonic	ENSG00000058335	NA	synonymous SNV	ENSG00000058335:ENST00000419573:exon15:c.C2119T:p.L707L	NA	NA	15q25.1	NA	NA	NA	NA	rs894780	0.08	0.08	0.075	0.0662939	0.1163	0.0972	0.0605	0.0061	0.0685	0.11	0.1	0.07	0.01	0.0865	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.66827	NA	NA	0.103075	0.021858	NA	0.029	NA	5.3607916
1116	20	55111371	55111371	G	A	exonic	FAM209B	NA	synonymous SNV	FAM209B:NM_001013646:exon2:c.G393A:p.Q131Q	exonic	ENSG00000213714	NA	synonymous SNV	ENSG00000213714:ENST00000371325:exon2:c.G393A:p.Q131Q	NA	NA	20q13.31	Score=745;Name=V$NRSF_01	NA	NA	NA	rs2296130	0.35	0.35	0.363	0.374002	0.4483	0.0466	0.3473	0.5461	0.4213	0.45	0.04	0.37	0.54	0.4004	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.689367	NA	NA	0.457442	0.539265	NA	0.435	NA	5.3605246
1116	15	101110265	101110265	T	A	exonic	LINS	NA	synonymous SNV	LINS:NM_001040616:exon7:c.A1452T:p.T484T	exonic	ENSG00000140471	NA	synonymous SNV	ENSG00000140471:ENST00000314742:exon7:c.A1452T:p.T484T	Score=355;Name=lod=37	NA	15q26.3	NA	NA	NA	NA	rs2411836	0.33	0.33	0.318	0.311502	0.4513	0.246	0.2493	0.2375	0.3793	0.46	0.25	0.29	0.25	0.386	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.98015	NA	NA	0.468946	0.281888	ID=COSM147994;OCCURENCE=1(stomach)	0.377	NA	5.3604206
1116	19	11230881	11230881	T	C	exonic	LDLR	NA	synonymous SNV	LDLR:NM_001195800:exon11:c.T1455C:p.V485V,LDLR:NM_001195799:exon12:c.T1836C:p.V612V,LDLR:NM_001195802:exon12:c.T1596C:p.V532V,LDLR:NM_001195803:exon12:c.T1578C:p.V526V,LDLR:NM_000527:exon13:c.T1959C:p.V653V,LDLR:NM_001195798:exon13:c.T1959C:p.V653V	exonic	ENSG00000130164	NA	synonymous SNV	ENSG00000130164:ENST00000455727:exon11:c.T1455C:p.V485V,ENSG00000130164:ENST00000535915:exon12:c.T1836C:p.V612V,ENSG00000130164:ENST00000545707:exon12:c.T1578C:p.V526V,ENSG00000130164:ENST00000557933:exon13:c.T1959C:p.V653V,ENSG00000130164:ENST00000558013:exon13:c.T1959C:p.V653V,ENSG00000130164:ENST00000558518:exon13:c.T1959C:p.V653V	Score=304;Name=lod=23	NA	19p13.2	NA	NA	NA	NA	rs5925	0.33	0.33	0.284	0.335863	0.4463	0.2163	0.5418	0.1498	0.4509	0.45	0.19	0.52	0.17	0.4092	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.542713	NA	NA	0.452674	0.197458	NA	0.283	NA	5.3584926
1116	5	80409729	80409729	T	C	exonic	RASGRF2	NA	synonymous SNV	RASGRF2:NM_006909:exon15:c.T2460C:p.S820S	exonic	ENSG00000113319	NA	synonymous SNV	ENSG00000113319:ENST00000265080:exon15:c.T2460C:p.S820S,ENSG00000113319:ENST00000503795:exon15:c.T2460C:p.S820S	Score=502;Name=lod=146	NA	5q14.1	NA	NA	NA	NA	rs10942942	0.41	0.41	0.453	0.436302	0.4394	0.254	0.3271	0.612	0.4611	0.41	0.27	0.35	0.6	0.416	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.802278	NA	NA	0.453605	0.587381	ID=COSM1132101;OCCURENCE=1(prostate)	0.565	NA	5.3576616
1116	18	6999628	6999628	T	C	exonic	LAMA1	NA	synonymous SNV	LAMA1:NM_005559:exon32:c.A4479G:p.S1493S	exonic	ENSG00000101680	NA	synonymous SNV	ENSG00000101680:ENST00000389658:exon32:c.A4479G:p.S1493S	NA	NA	18p11.31	NA	Name=CTCF	NA	NA	rs625106	0.45	0.45	0.471	0.466254	0.4215	0.2708	0.3112	0.7806	0.3988	0.43	0.26	0.35	0.76	0.4507	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.289069	NA	NA	0.437326	0.687699	NA	0.616	NA	5.3571406
1116	15	101113950	101113950	A	G	exonic	LINS	NA	synonymous SNV	LINS:NM_001040616:exon5:c.T1128C:p.S376S	exonic	ENSG00000140471	NA	synonymous SNV	ENSG00000140471:ENST00000314742:exon5:c.T1128C:p.S376S,ENSG00000140471:ENST00000560133:exon5:c.T771C:p.S257S,ENSG00000140471:ENST00000561308:exon5:c.T1128C:p.S376S	NA	NA	15q26.3	Score=854;Name=V$ARNT_02	NA	NA	NA	rs12592868	0.34	0.34	0.347	0.327476	0.4513	0.246	0.2507	0.2973	0.3793	0.46	0.25	0.29	0.31	0.3885	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.323573	NA	NA	0.469767	0.321153	ID=COSM147996;OCCURENCE=1(stomach)	0.391	NA	5.3570996
1116	16	74877694	74877694	C	T	intergenic	FA2H,WDR59	dist=68965;dist=29777	NA	NA	ncRNA_intronic	ENSG00000261458	NA	NA	NA	NA	NA	16q23.1	NA	Name=FOXA1_(C-20)	Name=13	NA	rs7187950	0.69	0.69	0.677	0.762181	0.6431	0.9921	0.7752	0.6589	0.7781	0.57	0.94	0.69	0.58	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.244275	NA	NA	NA	NA	NA	0.116	NA	5.3569
1116	2	25194741	25194741	G	A	exonic	DNAJC27	NA	synonymous SNV	DNAJC27:NM_001198559:exon1:c.C33T:p.P11P,DNAJC27:NM_016544:exon1:c.C33T:p.P11P	exonic	ENSG00000115137	NA	synonymous SNV	ENSG00000115137:ENST00000264711:exon1:c.C33T:p.P11P,ENSG00000115137:ENST00000380809:exon1:c.C33T:p.P11P	NA	NA	2p23.3	NA	Name=YY1_(C-20),c-Fos,Pol2,RFX5_(N-494),SP1,YY1,TCF4,NF-YA,IRF1,NF-YB	Name=148	NA	rs7593864	0.76	0.76	0.741	0.712859	0.7873	0.744	0.8588	0.6324	0.6094	0.78	0.76	0.87	0.63	0.7508	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.896406	NA	NA	0.772326	0.670676	ID=COSM1162609;OCCURENCE=1(pancreas)	0.79	NA	5.3562406
1116	19	53741188	53741188	C	T	exonic	ZNF677	NA	synonymous SNV	ZNF677:NM_182609:exon5:c.G792A:p.K264K	exonic	ENSG00000197928	NA	synonymous SNV	ENSG00000197928:ENST00000333952:exon5:c.G792A:p.K264K,ENSG00000197928:ENST00000598513:exon5:c.G792A:p.K264K	Score=340;Name=lod=32	NA	19q13.42	NA	NA	NA	NA	rs12984473	0.47	0.47	0.462	0.464856	0.4324	0.752	0.4294	0.2148	0.5654	0.43	0.75	0.44	0.25	0.4589	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.66403	NA	NA	0.419302	0.243305	NA	0.399	NA	5.3560646
1116	1	1178245	1178245	C	T	exonic	FAM132A	NA	synonymous SNV	FAM132A:NM_001014980:exon7:c.G780A:p.T260T	exonic	ENSG00000184163	NA	synonymous SNV	ENSG00000184163:ENST00000330388:exon7:c.G780A:p.T260T	NA	NA	1p36.33	NA	NA	NA	NA	rs11260566	0.17	0.17	0.147	0.178714	0.0944	0.1637	0.0865	0.3283	0.1442	0.1	0.2	0.08	0.33	0.1248	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.421415	NA	NA	0.091737	0.227502	NA	0.109	NA	5.3557296
1117	5	153939575	153939575	T	C	intergenic	HAND1,MIR3141	dist=81751;dist=35997	NA	NA	ncRNA_exonic	ENSG00000253146	NA	NA	NA	Score=725;Name=lod=1179	NA	5q33.2	NA	NA	Name=6	NA	rs4958746	0.5	0.5	0.496	0.509585	0.6451	0.374	0.4683	0.4637	0.6012	0.65	0.36	0.48	0.46	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.49751	NA	NA	NA	NA	ID=COSN167627;OCCURENCE=1(large_intestine)	0.486	NA	5.3549
1117	15	101598200	101598200	G	A	exonic	LRRK1	NA	synonymous SNV	LRRK1:NM_024652:exon29:c.G4533A:p.P1511P	exonic	ENSG00000154237	NA	synonymous SNV	ENSG00000154237:ENST00000388948:exon29:c.G4533A:p.P1511P,ENSG00000154237:ENST00000284395:exon30:c.G4524A:p.P1508P	NA	NA	15q26.3	Score=813;Name=V$HNF4_01	NA	NA	NA	rs11857803	0.31	0.31	0.306	0.318291	0.4493	0.128	0.2839	0.3071	0.4192	0.46	0.12	0.34	0.27	0.4009	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.046026	NA	NA	0.462542	0.32059	NA	0.377	NA	5.3539246
1117	6	52622814	52622814	C	T	intronic	GSTA2	NA	NA	NA	intronic	ENSG00000244067	NA	NA	NA	NA	NA	6p12.2	NA	Name=STAT3	Name=67	NA	rs2254050	0.78	0.78	0.777	0.780551	0.6461	0.8631	0.7666	0.9138	0.6636	0.64	0.86	0.76	0.92	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.089108	NA	NA	NA	NA	NA	0.703	NA	5.3539
1117	10	94968665	94968665	A	G	intergenic	CYP26A1,MYOF	dist=131024;dist=97521	NA	NA	ncRNA_exonic	ENSG00000237417	NA	NA	NA	Score=646;Name=lod=561	NA	10q23.33	NA	NA	Name=41	NA	rs11596790	0.42	0.42	0.434	0.421526	0.6461	0.0526	0.4438	0.5295	0.409	0.63	0.06	0.47	0.48	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.009989	NA	NA	NA	NA	NA	0.391	NA	5.3539
1117	5	153856974	153856974	C	G	intronic	HAND1	NA	NA	NA	intronic	ENSG00000113196	NA	NA	NA	NA	NA	5q33.2	NA	Name=SUZ12	Name=70	NA	rs1846966	0.31	0.31	0.257	0.305312	0.3191	0.3462	0.4741	0.152	0.3364	0.3	0.36	0.44	0.16	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.259811	NA	NA	0.327725	0.175799	NA	0.304	NA	5.353175
1117	1	38463504	38463504	C	T	exonic	FHL3	NA	synonymous SNV	FHL3:NM_001243878:exon4:c.G216A:p.P72P,FHL3:NM_004468:exon5:c.G540A:p.P180P	exonic	ENSG00000183386	NA	synonymous SNV	ENSG00000183386:ENST00000373016:exon5:c.G540A:p.P180P	Score=576;Name=lod=292	NA	1p34.3	NA	NA	NA	NA	rs7366048	0.55	0.55	0.538	0.575679	0.4205	0.6756	0.5202	0.6861	0.5225	0.41	0.64	0.51	0.68	0.4748	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.485356	NA	NA	0.418372	0.651838	NA	0.471	NA	5.3529946
1117	20	25038372	25038372	G	A	intronic	ACSS1	NA	NA	NA	intronic	ENSG00000154930	NA	NA	NA	NA	NA	20p11.21	NA	Name=HA-E2F1,ZNF263,Pol2	Name=110	NA	rs62217194	0.17	0.17	0.165	0.20627	0.2018	0.0288	0.3084	0.202	0.3272	0.21	0.02	0.29	0.21	0.2304	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.657164	NA	NA	0.216744	0.185656	NA	0.036	NA	5.351056
1117	6	160174456	160174456	T	G	intronic	WTAP	NA	NA	NA	intronic	ENSG00000112096,ENSG00000146457	NA	NA	NA	Score=760;Name=lod=1638	NA	6q25.3	NA	Name=CEBPB	Name=8	NA	rs1440	0.38	0.38	0.351	0.374201	0.5477	0.1637	0.6167	0.1899	0.4898	0.56	0.15	0.6	0.2	0.5236	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.325101	3.325101	NA	0.578372	0.237177	NA	0.304	NA	5.350328
1117	14	75365062	75365062	A	G	intronic	DLST	NA	NA	NA	intronic	ENSG00000119689	NA	NA	NA	Score=617;Name=lod=430	NA	14q24.3	NA	Name=SP1,FOXA2_(SC-6554)	Name=2	NA	rs2080087	0.62	0.62	0.626	0.666534	0.5308	0.4216	0.5749	0.9781	0.7025	0.54	0.47	0.59	0.97	0.5886	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.802638	1.802638	NA	0.530698	0.898094	NA	0.543	NA	5.349902
1117	16	57950178	57950178	G	C	intronic	CNGB1	NA	NA	NA	intronic	ENSG00000070729	NA	NA	NA	NA	NA	16q21	NA	Name=CEBPB	Name=4	NA	rs440565	0.72	0.72	0.727	0.763578	0.6501	0.7381	0.6326	0.9017	0.8129	0.63	0.74	0.64	0.89	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.120053	NA	NA	NA	NA	NA	0.717	NA	5.3499
1117	17	33454415	33454415	C	A	exonic	FNDC8	NA	synonymous SNV	FNDC8:NM_017559:exon2:c.C564A:p.T188T	exonic	ENSG00000073598	NA	synonymous SNV	ENSG00000073598:ENST00000158009:exon2:c.C564A:p.T188T	Score=405;Name=lod=59	NA	17q12	NA	NA	NA	NA	rs2306508	0.45	0.45	0.401	0.444489	0.4354	0.7123	0.5447	0.1044	0.5665	0.44	0.71	0.52	0.12	0.4577	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.917012	NA	NA	0.42407	0.159328	NA	0.326	NA	5.3494966
1117	12	101018161	101018161	C	T	exonic	GAS2L3	NA	synonymous SNV	GAS2L3:NM_174942:exon10:c.C1578T:p.S526S	exonic	ENSG00000139354	NA	synonymous SNV	ENSG00000139354:ENST00000552854:exon1:c.C669T:p.S223S,ENSG00000139354:ENST00000266754:exon9:c.C1578T:p.S526S,ENSG00000139354:ENST00000539410:exon9:c.C1578T:p.S526S,ENSG00000139354:ENST00000537247:exon10:c.C1266T:p.S422S,ENSG00000139354:ENST00000547754:exon10:c.C1578T:p.S526S	NA	NA	12q23.1	NA	NA	NA	NA	rs1045603	0.11	0.11	0.089	0.100639	0.1123	0.0962	0.1427	0.093	0.0736	0.12	0.08	0.16	0.09	0.103	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.083618	NA	NA	0.102442	0.079437	NA	0.08	NA	5.3489246
1117	20	50314200	50314200	A	G	intronic	ATP9A	NA	NA	NA	intronic	ENSG00000054793	NA	NA	NA	NA	NA	20q13.2	NA	Name=c-Myc	Name=6	NA	rs1205690	0.6	0.6	0.596	0.574281	0.6511	0.6349	0.6427	0.4955	0.4908	0.63	0.64	0.64	0.49	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.116575	NA	NA	NA	NA	NA	0.464	NA	5.3489
1117	17	76060954	76060954	A	C	exonic	TNRC6C	NA	synonymous SNV	TNRC6C:NM_001142640:exon5:c.A2538C:p.A846A,TNRC6C:NM_018996:exon5:c.A2547C:p.A849A	exonic	ENSG00000078687	NA	synonymous SNV	ENSG00000078687:ENST00000541771:exon2:c.A2547C:p.A849A,ENSG00000078687:ENST00000544502:exon2:c.A2538C:p.A846A,ENSG00000078687:ENST00000585438:exon2:c.A132C:p.A44A,ENSG00000078687:ENST00000301624:exon4:c.A2547C:p.A849A,ENSG00000078687:ENST00000335749:exon4:c.A2538C:p.A846A,ENSG00000078687:ENST00000588061:exon6:c.A2547C:p.A849A,ENSG00000078687:ENST00000588847:exon6:c.A2538C:p.A846A	NA	NA	17q25.3	NA	NA	NA	NA	rs61730171	0.11	0.11	0.117	0.142173	0.0855	0.1756	0.0937	0.146	0.1953	0.08	0.14	0.09	0.15	0.1302	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.783145	NA	NA	0.10287	0.118657	NA	0.13	NA	5.3480966
1117	17	21204266	21204266	T	C	exonic	MAP2K3	NA	synonymous SNV	MAP2K3:NM_002756:exon5:c.T273C:p.C91C,MAP2K3:NM_145109:exon5:c.T360C:p.C120C	exonic	ENSG00000034152	NA	synonymous SNV	ENSG00000034152:ENST00000342679:exon5:c.T360C:p.C120C,ENSG00000034152:ENST00000361818:exon5:c.T273C:p.C91C,ENSG00000034152:ENST00000496046:exon5:c.T360C:p.C120C,ENSG00000034152:ENST00000526076:exon5:c.T273C:p.C91C,ENSG00000034152:ENST00000316920:exon6:c.T273C:p.C91C	Score=469;Name=lod=107	NA	17p11.2	NA	NA	NA	NA	rs2230435	0.54	0.54	0.552	0.306909	0.2664	0.2183	0.2939	0.3797	0.3507	0.53	0.52	0.55	0.57	0.5397	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.511938	1.511938	NA	0.51314	0.545847	NA	0.478	NA	5.3474266
1117	15	54847677	54847677	C	T	exonic	UNC13C	NA	synonymous SNV	UNC13C:NM_001080534:exon27:c.C5925T:p.C1975C	exonic	ENSG00000137766	NA	synonymous SNV	ENSG00000137766:ENST00000537900:exon27:c.C5919T:p.C1973C,ENSG00000137766:ENST00000260323:exon28:c.C5925T:p.C1975C,ENSG00000137766:ENST00000545554:exon28:c.C5925T:p.C1975C	Score=397;Name=lod=55	NA	15q21.3	NA	NA	NA	NA	rs11639005	0.4	0.4	0.368	0.409345	0.4423	0.5427	0.464	0.1233	0.5859	0.44	0.55	0.41	0.12	0.4458	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.811941	NA	NA	0.431339	0.174628	NA	0.37	NA	5.3472276
1117	11	73106294	73106294	A	C	exonic	RELT	NA	synonymous SNV	RELT:NM_032871:exon10:c.A1209C:p.T403T,RELT:NM_152222:exon10:c.A1209C:p.T403T	exonic	ENSG00000054967	NA	synonymous SNV	ENSG00000054967:ENST00000064780:exon10:c.A1209C:p.T403T,ENSG00000054967:ENST00000393580:exon10:c.A1209C:p.T403T	NA	NA	11q13.4	NA	NA	NA	NA	rs17851510	0.12	0.12	0.116	0.130591	0.1083	0.0129	0.0778	0.3048	0.0767	0.11	0.02	0.07	0.3	0.1109	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.841291	NA	NA	0.100981	0.235401	NA	0.21	NA	5.3464856
1118	7	131817850	131817850	T	C	exonic	PLXNA4	NA	synonymous SNV	PLXNA4:NM_020911:exon31:c.A5547G:p.A1849A	exonic	ENSG00000221866	NA	synonymous SNV	ENSG00000221866:ENST00000321063:exon31:c.A5547G:p.A1849A,ENSG00000221866:ENST00000359827:exon31:c.A5547G:p.A1849A	NA	NA	7q32.3	NA	NA	NA	NA	rs75848889	0.11	0.11	0.084	0.130791	0.0984	0.0962	0.2853	0.0303	0.226	0.09	0.11	0.25	0.02	0.1234	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.704499	NA	NA	0.099907	0.034459	NA	0.101	NA	5.3449596
1118	1	155899020	155899020	A	T	intronic	KIAA0907	NA	NA	NA	intronic	ENSG00000132680	NA	NA	NA	NA	NA	1q22	NA	Name=JunD,c-Fos	Name=46	NA	rs539602	0.39	0.39	0.346	0.398962	0.6551	0.1786	0.5994	0.1369	0.5746	0.65	0.17	0.56	0.12	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.117368	NA	NA	NA	NA	NA	0.355	NA	5.3449
1118	5	169568406	169568406	T	G	intergenic	FOXI1,C5orf58	dist=31677;dist=91544	NA	NA	ncRNA_exonic	ENSG00000253219	NA	NA	NA	Score=638;Name=lod=520	NA	5q35.1	NA	NA	Name=6	NA	rs1806304	0.53	0.53	0.478	0.51897	0.6551	0.4464	0.7104	0.2837	0.636	0.64	0.47	0.71	0.32	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.10989	NA	NA	NA	NA	NA	0.486	NA	5.3449
1118	2	95552783	95552783	C	T	ncRNA_exonic	LOC442028	NA	NA	NA	ncRNA_exonic	ENSG00000259848	NA	NA	NA	Score=611;Name=lod=404	NA	2q11.1	NA	NA	NA	NA	rs12717784	0.48	0.48	0.45	0.492612	0.3221	0.499	0.5548	0.7118	0.3211	0.33	0.5	0.49	0.7	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.629763	NA	NA	NA	NA	ID=COSN166191;OCCURENCE=1(NS)	0.355	NA	5.3445666
1118	2	132294068	132294068	G	C	ncRNA_intronic	RNU6-81P	NA	NA	NA	ncRNA_intronic	ENSG00000224679	NA	NA	NA	NA	NA	2q21.1	NA	NA	Name=3	NA	rs10166775	0.5	0.5	0.485	0.514976	0.3221	0.6825	0.5346	0.6422	0.3548	0.3	0.65	0.49	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.640499	NA	NA	NA	NA	NA	0.464	NA	5.3445666
1118	5	79595942	79595942	G	A	ncRNA_exonic	LOC644936	NA	NA	NA	ncRNA_exonic	ENSG00000184188	NA	NA	NA	Score=859;Name=lod=4113	NA	5q14.1	NA	NA	NA	NA	rs11741016	0.15	0.15	0.171	0.147963	0.164	NA	0.1326	0.2806	0.1155	0.16	NA	0.16	0.29	0.1586	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.123924	NA	0	NA	NA	NA	0.159	NA	5.3440666
1118	1	1153113	1153113	G	A	exonic	SDF4	NA	synonymous SNV	SDF4:NM_016547:exon7:c.C984T:p.L328L	exonic	ENSG00000078808	NA	synonymous SNV	ENSG00000078808:ENST00000263741:exon7:c.C984T:p.L328L	NA	NA	1p36.33	NA	NA	NA	NA	rs12036216	0.14	0.14	0.134	0.130591	0.1014	0.252	0.0879	0.1051	0.1002	0.11	0.27	0.06	0.09	0.1143	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.112461	NA	NA	0.106977	0.103315	NA	0.109	NA	5.3439896
1118	9	101552955	101552955	T	C	intronic	ANKS6	NA	NA	NA	intronic	ENSG00000165138	NA	NA	NA	NA	NA	9q22.33	NA	Name=GATA-2	Name=4	NA	rs7027771	0.51	0.51	0.521	0.503195	0.6561	0.381	0.5086	0.4667	0.5174	0.64	0.35	0.52	0.49	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.125593	NA	NA	NA	NA	NA	0.536	NA	5.3439
1118	2	220404648	220404648	C	T	exonic	CHPF	NA	synonymous SNV	CHPF:NM_001195731:exon4:c.G1299A:p.L433L,CHPF:NM_024536:exon4:c.G1785A:p.L595L	exonic	ENSG00000123989	NA	synonymous SNV	ENSG00000123989:ENST00000243776:exon4:c.G1785A:p.L595L,ENSG00000123989:ENST00000535926:exon4:c.G1299A:p.L433L	Score=543;Name=lod=214	NA	2q35	NA	NA	NA	NA	rs1043833	0.36	0.36	0.31	0.30631	0.4523	0.2748	0.4841	0.1884	0.2219	0.46	0.28	0.44	0.23	0.4088	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.080565	NA	NA	0.461709	0.248752	NA	0.391	NA	5.3438576
1118	3	124487849	124487849	A	G	intronic	ITGB5	NA	NA	NA	intronic	ENSG00000082781	NA	NA	NA	NA	NA	3q21.2	NA	Name=SMC3_(ab9263),CTCF_(SC-5916),USF1_(SC-8983),USF2,USF-1,CTCF,Rad21,c-Myc,CTCF_(C-20)	Name=40	NA	rs2291082	0.32	0.32	0.302	0.36242	0.1859	0.3165	0.3991	0.5408	0.3241	0.18	0.34	0.34	0.52	0.2695	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.001303	NA	NA	0.20093	0.466863	NA	0.348	NA	5.34367
1118	2	73746923	73746923	C	T	exonic	ALMS1	NA	synonymous SNV	ALMS1:NM_015120:exon11:c.C9558T:p.T3186T	exonic	ENSG00000116127	NA	nonsynonymous SNV	ENSG00000116127:ENST00000423048:exon4:c.C3052T:p.P1018S	NA	NA	2p13.1	NA	NA	NA	NA	rs11884776	0.25	0.25	0.27	0.256789	0.2137	0.005	0.2349	0.5741	0.1472	0.22	0.01	0.22	0.58	0.2169	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.638995	1.638995	0	0.225767	0.47904	NA	0.312	NA	5.343633
1118	2	132256505	132256505	A	C	ncRNA_exonic	LOC150776	NA	NA	NA	ncRNA_exonic	ENSG00000152117	NA	NA	NA	Score=566;Name=lod=267	NA	2q21.1	NA	NA	NA	NA	rs3817572	0.5	0.5	0.51	0.51278	0.3231	0.6845	0.5331	0.6256	0.364	0.3	0.66	0.48	0.64	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.854249	1.854249	NA	NA	NA	NA	0.457	NA	5.3435666
1118	3	119378872	119378872	G	A	exonic	POPDC2	NA	synonymous SNV	POPDC2:NM_022135:exon1:c.C399T:p.C133C	exonic	ENSG00000121577	NA	synonymous SNV	ENSG00000121577:ENST00000264231:exon1:c.C399T:p.C133C,ENSG00000121577:ENST00000341124:exon1:c.C399T:p.C133C,ENSG00000121577:ENST00000468801:exon1:c.C399T:p.C133C,ENSG00000121577:ENST00000493094:exon1:c.C399T:p.C133C,ENSG00000121577:ENST00000538678:exon1:c.C399T:p.C133C	Score=441;Name=lod=83	NA	3q13.33	NA	NA	NA	NA	rs1880040	0.38	0.38	0.352	0.400958	0.4304	0.3323	0.4611	0.2912	0.547	0.43	0.34	0.47	0.26	0.4503	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.48847	NA	NA	0.442558	0.316387	NA	0.42	NA	5.3434086
1118	1	229730452	229730452	G	A	exonic	TAF5L	NA	synonymous SNV	TAF5L:NM_014409:exon5:c.C1362T:p.S454S	exonic	ENSG00000135801	NA	synonymous SNV	ENSG00000135801:ENST00000366676:exon4:c.C1362T:p.S454S,ENSG00000135801:ENST00000258281:exon5:c.C1362T:p.S454S	Score=512;Name=lod=161	NA	1q42.13	NA	NA	NA	NA	rs2295625	0.32	0.32	0.305	0.303514	0.4612	0.3254	0.2666	0.0938	0.4284	0.46	0.33	0.33	0.08	0.3986	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.881182	NA	NA	0.463605	0.147299	NA	0.29	NA	5.3432616
1118	13	36744800	36744800	G	A	exonic	CCDC169-SOHLH2,SOHLH2	NA	synonymous SNV	SOHLH2:NM_017826:exon10:c.C1125T:p.Y375Y,CCDC169-SOHLH2:NM_001198910:exon15:c.C1356T:p.Y452Y	exonic	ENSG00000120669,ENSG00000250709	NA	synonymous SNV	ENSG00000120669:ENST00000379881:exon10:c.C1125T:p.Y375Y,ENSG00000250709:ENST00000511166:exon15:c.C1356T:p.Y452Y,ENSG00000120669:ENST00000554962:exon15:c.C1356T:p.Y452Y	NA	NA	13q13.3	NA	NA	NA	NA	rs2296967	0.07	0.07	0.067	0.0746805	0.1014	0.0794	0.085	0.003	0.1319	0.1	0.08	0.11	0.002	0.1027	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.721377	NA	NA	0.119535	0.025874	ID=COSM147666;OCCURENCE=1(stomach)	0.101	NA	5.3430316
1118	16	84494275	84494275	C	T	exonic	ATP2C2	NA	synonymous SNV	ATP2C2:NM_014861:exon24:c.C2349T:p.P783P	exonic	ENSG00000064270	NA	synonymous SNV	ENSG00000064270:ENST00000262429:exon24:c.C2349T:p.P783P,ENSG00000064270:ENST00000416219:exon25:c.C2436T:p.P812P	Score=414;Name=lod=64	NA	16q24.1	NA	NA	NA	NA	rs2241640	0.51	0.51	0.521	0.472244	0.4304	0.6349	0.5043	0.4077	0.4121	0.43	0.66	0.48	0.47	0.4511	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.69386	NA	NA	0.442553	0.402885	NA	0.457	NA	5.3426136
1118	5	137892170	137892170	G	A	exonic	HSPA9	NA	synonymous SNV	HSPA9:NM_004134:exon16:c.C1933T:p.L645L	exonic	ENSG00000113013	NA	synonymous SNV	ENSG00000113013:ENST00000297185:exon16:c.C1933T:p.L645L	Score=691;Name=lod=861	NA	5q31.2	NA	NA	NA	NA	rs10117	0.6	0.6	0.633	0.645767	0.4364	0.7907	0.3761	0.8207	0.6667	0.44	0.81	0.37	0.8	0.4886	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.922394	NA	NA	0.399651	0.737177	NA	0.616	NA	5.3420156
1118	1	183105705	183105705	G	A	exonic	LAMC1	NA	synonymous SNV	LAMC1:NM_002293:exon25:c.G4299A:p.A1433A	exonic	ENSG00000135862	NA	synonymous SNV	ENSG00000135862:ENST00000258341:exon25:c.G4299A:p.A1433A	Score=361;Name=lod=39	NA	1q25.3	NA	NA	NA	NA	rs20561	0.38	0.38	0.363	0.351837	0.4433	0.5109	0.3833	0.1702	0.317	0.45	0.46	0.4	0.19	0.4498	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.820643	NA	NA	0.431628	0.216523	NA	0.362	NA	5.3419386
1118	15	33359574	33359574	C	A	exonic	FMN1	NA	nonsynonymous SNV	FMN1:NM_001103184:exon1:c.G512T:p.G171V	exonic	ENSG00000248905	NA	nonsynonymous SNV	ENSG00000248905:ENST00000334528:exon1:c.G512T:p.G171V,ENSG00000248905:ENST00000558197:exon1:c.G512T:p.G171V	NA	NA	15q13.3	NA	NA	NA	NA	rs11858145	0.71	0.71	0.692	0.723243	0.6481	0.8284	0.7795	0.587	0.8364	0.64	0.85	0.78	0.6	0.6954	0.85	1	T	0.0	B	0.0	B	.	.	.	.	.	.	1.31	T	-0.964	T	0.000	T	0.047	-1.303	0.037	1.03	0.018	-0.756	5.755	-1.30315	NA	1	0.647933	0.600052	NA	0.616	NA	5.3419004
1118	12	124844581	124844581	G	A	intronic	NCOR2	NA	NA	NA	intronic	ENSG00000196498	NA	NA	NA	NA	NA	12q24.31	NA	Name=ERalpha_a,Pol2,GATA3_(SC-268)	Name=42	NA	rs7975419	0.35	0.35	0.302	0.321885	0.6581	0.1052	0.5764	0.0537	0.3814	0.64	0.09	0.57	0.06	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.732773	NA	NA	NA	NA	NA	0.188	NA	5.3419
1118	6	109768295	109768295	G	A	exonic	MICAL1	NA	synonymous SNV	MICAL1:NM_001159291:exon16:c.C1950T:p.Y650Y,MICAL1:NM_022765:exon17:c.C2208T:p.Y736Y	exonic	ENSG00000135596	NA	synonymous SNV	ENSG00000135596:ENST00000358577:exon16:c.C1950T:p.Y650Y,ENSG00000135596:ENST00000358807:exon17:c.C2208T:p.Y736Y,ENSG00000135596:ENST00000368952:exon17:c.C2265T:p.Y755Y	NA	NA	6q21	Score=865;Name=V$TAL1ALPHAE47_01	NA	NA	NA	rs910730	0.53	0.53	0.544	0.551518	0.4284	0.4504	0.4928	0.7557	0.5481	0.43	0.51	0.49	0.75	0.4767	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.687985	NA	NA	0.420116	0.696777	NA	0.5	NA	5.3414506
1118	3	113377505	113377505	T	G	exonic	KIAA2018	NA	synonymous SNV	KIAA2018:NM_001009899:exon7:c.A3024C:p.L1008L	exonic	ENSG00000176542	NA	synonymous SNV	ENSG00000176542:ENST00000478658:exon5:c.A3024C:p.L1008L,ENSG00000176542:ENST00000316407:exon7:c.A3024C:p.L1008L	NA	NA	3q13.2	NA	NA	NA	NA	rs16861271	0.14	0.14	0.127	0.172125	0.0875	0.3214	0.196	0.0061	0.3129	0.08	0.32	0.15	0.01	0.1388	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.226126	NA	NA	0.098946	0.01922	NA	0.101	NA	5.3414206
1118	1	12919983	12919983	G	A	exonic	PRAMEF2	NA	synonymous SNV	PRAMEF2:NM_023014:exon3:c.G723A:p.R241R	exonic	ENSG00000120952	NA	synonymous SNV	ENSG00000120952:ENST00000240189:exon3:c.G723A:p.R241R	NA	NA	1p36.21	NA	NA	NA	NA	rs77138000	0.12	0.12	0.125	0.133986	0.1103	0.0169	0.1052	0.2806	0.1012	0.11	0.01	0.11	0.26	0.1071	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.456525	NA	NA	0.107932	0.237857	NA	0.007	NA	5.3413346
1118	2	231742711	231742711	T	G	intronic	ITM2C	NA	NA	NA	intronic	ENSG00000135916	NA	NA	NA	NA	NA	2q37.1	NA	Name=c-Myc,Max	Name=12	NA	rs60237566	0.22	0.22	0.21	0.219449	0.2147	0.0923	0.1686	0.3555	0.2076	0.22	0.09	0.2	0.37	0.2131	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.229039	NA	NA	0.231047	0.336813	NA	0.181	NA	5.341153
1118	17	76497778	76497778	T	C	ncRNA_exonic	LOC100996295	NA	NA	NA	UTR3	ENSG00000268470	ENST00000598378:c.*1215T>C	NA	NA	NA	NA	17q25.3	NA	Name=PU.1	Name=4	NA	rs671899	0.47	0.47	0.442	0.434305	0.4006	0.6875	0.4236	0.3215	0.3681	0.42	0.67	0.41	0.37	0.4003	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.712307	NA	NA	0.357951	0.330925	NA	0.449	NA	5.341149
1118	9	19063108	19063108	T	C	exonic	HAUS6	NA	synonymous SNV	HAUS6:NM_001270890:exon14:c.A1422G:p.L474L,HAUS6:NM_017645:exon14:c.A1527G:p.L509L	exonic	ENSG00000147874	NA	synonymous SNV	ENSG00000147874:ENST00000415524:exon3:c.A75G:p.L25L,ENSG00000147874:ENST00000380496:exon11:c.A1119G:p.L373L,ENSG00000147874:ENST00000380502:exon14:c.A1527G:p.L509L	NA	NA	9p22.1	Score=908;Name=V$GATA1_04	NA	NA	NA	rs13302748	0.37	0.37	0.318	0.352037	0.4493	0.38	0.4035	0.1702	0.4325	0.43	0.41	0.44	0.18	0.4218	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.743314	NA	NA	0.454979	0.201543	NA	0.319	NA	5.3405876
1118	5	140797630	140797630	G	T	exonic	PCDHGB7	NA	synonymous SNV	PCDHGB7:NM_018927:exon1:c.G204T:p.V68V,PCDHGB7:NM_032101:exon1:c.G204T:p.V68V	exonic	ENSG00000254122	NA	synonymous SNV	ENSG00000254122:ENST00000398594:exon1:c.G204T:p.V68V	NA	NA	5q31.3	NA	NA	Name=38	NA	rs2015825	0.52	0.52	0.505	0.540935	0.4225	0.3244	0.6182	0.8419	0.4243	0.45	0.33	0.6	0.78	0.4736	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.683228	NA	NA	0.429983	0.801078	NA	0.514	NA	5.3405836
1118	9	19076673	19076673	G	C	exonic	HAUS6	NA	synonymous SNV	HAUS6:NM_001270890:exon11:c.C1116G:p.P372P,HAUS6:NM_017645:exon11:c.C1221G:p.P407P	exonic	ENSG00000147874	NA	synonymous SNV	ENSG00000147874:ENST00000380496:exon8:c.C813G:p.P271P,ENSG00000147874:ENST00000380502:exon11:c.C1221G:p.P407P	Score=488;Name=lod=128	NA	9p22.1	NA	NA	NA	NA	rs13286328	0.38	0.38	0.335	0.361022	0.4493	0.3681	0.4049	0.2163	0.4274	0.43	0.4	0.44	0.23	0.4232	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.655948	NA	NA	0.45407	0.238992	NA	0.319	NA	5.3400966
1118	2	102138184	102138184	C	T	intergenic	RFX8,MAP4K4	dist=47019;dist=175981	NA	NA	ncRNA_exonic	ENSG00000232556	NA	NA	NA	Score=661;Name=lod=647	NA	2q11.2	NA	Name=PU.1	NA	NA	rs1509497	0.55	0.55	0.551	0.546925	0.66	0.5238	0.3746	0.5182	0.6155	0.65	0.49	0.44	0.54	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.330802	NA	NA	NA	NA	NA	0.514	NA	5.34
1118	1	94341267	94341267	A	G	exonic	DNTTIP2	NA	synonymous SNV	DNTTIP2:NM_014597:exon3:c.T1740C:p.F580F	exonic	ENSG00000067334	NA	synonymous SNV	ENSG00000067334:ENST00000436063:exon3:c.T1740C:p.F580F	Score=605;Name=lod=382	NA	1p22.1	NA	NA	NA	NA	rs2273165	0.5	0.5	0.491	0.533746	0.4225	0.621	0.4337	0.5378	0.6237	0.42	0.63	0.46	0.5	0.4754	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.139345	NA	NA	0.428973	0.514387	NA	0.594	NA	5.3397936
1118	7	100552549	100552549	C	A	intergenic	ACHE,MUC12	dist=59008;dist=60355	NA	NA	exonic	ENSG00000169894	NA	nonsynonymous SNV	ENSG00000169894:ENST00000319509:exon1:c.C1300A:p.L434I	NA	NA	7q22.1	NA	NA	NA	NA	rs73163760	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4938	NA	0.21	T	0.001	B	0.0	B	.	.	0.723	N	0	N	3.29	T	-0.984	T	0.009	T	0.055	0.644	7.456	0.871	0.294	-0.131	5.985	0.643657	NA	0.63	NA	NA	NA	NA	NA	5.3395334
1118	7	100552358	100552358	C	G	intergenic	ACHE,MUC12	dist=58817;dist=60546	NA	NA	exonic	ENSG00000169894	NA	nonsynonymous SNV	ENSG00000169894:ENST00000319509:exon1:c.C1109G:p.T370S	NA	NA	7q22.1	NA	NA	NA	NA	rs73714254	NA	NA	0.363	0.000199681	NA	NA	NA	NA	0.001	NA	NA	NA	NA	0.4942	0.065	1	T	0.0	B	0.0	B	.	.	1.000	N	-0.55	N	3.13	T	-0.928	T	0.007	T	0.038	-2.421	0.003	1.57	0.213	-0.258	3.889	-2.420907	NA	0.83	NA	NA	NA	0.08	NA	5.3391334
1118	19	45451656	45451656	T	G	ncRNA_intronic	APOC4-APOC2	NA	NA	NA	UTR5	ENSG00000234906	ENST00000585786:c.-80T>G	NA	NA	NA	NA	19q13.32	NA	Name=Egr-1	NA	NA	rs10422603	0.19	0.19	0.194	0.213458	0.161	0.0833	0.2075	0.2852	0.3088	0.18	0.09	0.19	0.32	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.135364	NA	NA	NA	NA	NA	0.152	NA	5.339
1118	15	63449680	63449680	C	G	UTR5	RPS27L	NM_015920:c.-76G>C	NA	NA	UTR5	ENSG00000185088	ENST00000330964:c.-76G>C,ENST00000439025:c.-76G>C	NA	NA	NA	NA	15q22.2	NA	Name=SRF,c-Myc,HEY1,NFKB,TBP,IRF1,USF-1,FOXA1_(C-20),ELK4,Pol2(b),AP-2alpha,Sin3Ak-20,KAP1,ZNF263,Pol2-4H8,Ini1,YY1,NANOG_(SC-33759),Oct-2,Max,GR,FOXA1_(SC-101058),ELF1_(SC-631),FOXA2_(SC-6554),CEBPB,GTF2F1_(RAP-74),POU2F2,GABP,TAF1,ETS1,SP2_(SC-643),Znf143_(16618-1-AP),TAF7_(SQ-8),Pol2,NRSF,Pol2(phosphoS2)	Name=148	NA	rs2292038	0.31	0.31	0.304	0.283546	0.492	0.2321	0.2723	0.1853	0.2628	0.48	0.22	0.3	0.18	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.206196	2.206196	NA	0.502514	0.242052	NA	0.268	NA	5.3388194
1118	7	120428799	120428799	C	A	exonic	TSPAN12	NA	synonymous SNV	TSPAN12:NM_012338:exon8:c.G765T:p.P255P	exonic	ENSG00000106025	NA	synonymous SNV	ENSG00000106025:ENST00000222747:exon8:c.G765T:p.P255P,ENSG00000106025:ENST00000415871:exon9:c.G765T:p.P255P	Score=633;Name=lod=498	NA	7q31.31	Score=789;Name=V$COMP1_01	NA	NA	NA	rs41623	0.83	0.83	0.815	0.851438	0.7584	0.9593	0.8559	0.7852	0.9223	0.74	0.97	0.84	0.77	0.8032	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.378074	NA	NA	0.766279	0.788016	NA	0.775	NA	5.3387876
1118	5	13814682	13814682	T	C	intronic	DNAH5	NA	NA	NA	intronic	ENSG00000039139	NA	NA	NA	NA	NA	5p15.2	NA	Name=SMC3_(ab9263),Rad21,CTCF	Name=18	NA	rs56046501	0.32	0.32	0.299	0.303514	0.2227	0.5605	0.2133	0.3132	0.1728	0.23	0.52	0.2	0.3	0.2304	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.361837	3.361837	NA	0.208605	0.282243	NA	0.304	NA	5.338295
1118	2	128610648	128610648	T	C	exonic	POLR2D	NA	synonymous SNV	POLR2D:NM_004805:exon2:c.A105G:p.S35S	exonic	ENSG00000144231	NA	synonymous SNV	ENSG00000144231:ENST00000272645:exon2:c.A105G:p.S35S,ENSG00000144231:ENST00000409955:exon2:c.A105G:p.S35S	NA	NA	2q14.3	NA	NA	NA	NA	rs10210695	0.12	0.12	0.122	0.123602	0.1024	0.0466	0.0735	0.2859	0.0409	0.1	0.02	0.07	0.29	0.1105	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.489933	1.489933	NA	0.115581	0.276668	NA	0.203	NA	5.3381856
1118	22	22868497	22868497	G	C	exonic	ZNF280A	NA	nonsynonymous SNV	ZNF280A:NM_080740:exon2:c.C1458G:p.F486L	exonic	ENSG00000169548	NA	nonsynonymous SNV	ENSG00000169548:ENST00000302097:exon2:c.C1458G:p.F486L	NA	NA	22q11.22	NA	NA	NA	NA	rs361762	0.53	0.53	0.477	0.473642	0.7048	0.4127	0.732	0.2383	0.4335	0.7	0.42	0.7	0.26	0.6099	0.7	1	T	0.0	B	0.0	B	.	.	1.000	P	-2.215	N	5.65	T	-0.995	T	0.000	T	0.036	-2.455	0.003	0.473	-0.038	-0.219	0.782	-2.455226	NA	1	0.680698	0.307989	NA	0.399	NA	5.3379354
1118	7	100552384	100552384	A	G	intergenic	ACHE,MUC12	dist=58843;dist=60520	NA	NA	exonic	ENSG00000169894	NA	nonsynonymous SNV	ENSG00000169894:ENST00000319509:exon1:c.A1135G:p.T379A	NA	NA	7q22.1	NA	NA	NA	NA	rs75597914	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4954	0.011	0.58	T	0.0	B	0.0	B	.	.	0.723	N	-0.345	N	3.14	T	-0.928	T	0.008	T	0.011	-0.939	0.361	-0.495	-0.630	-0.495	0.210	-0.93945	NA	1	NA	NA	NA	0.007	NA	5.3379334
1118	5	140857798	140857798	T	C	exonic	PCDHGC3	NA	synonymous SNV	PCDHGC3:NM_002588:exon1:c.T2115C:p.F705F,PCDHGC3:NM_032402:exon1:c.T2115C:p.F705F	exonic	ENSG00000240184	NA	synonymous SNV	ENSG00000240184:ENST00000308177:exon1:c.T2115C:p.F705F	Score=378;Name=lod=46	NA	5q31.3	NA	NA	NA	NA	rs1423148	0.53	0.53	0.521	0.554313	0.4225	0.3264	0.6182	0.8903	0.4254	0.44	0.33	0.6	0.85	0.4784	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.676987	NA	NA	0.428023	0.825465	NA	0.551	NA	5.3377436
1118	12	96066162	96066162	C	T	ncRNA_exonic	PGAM1P5	NA	NA	NA	ncRNA_exonic	ENSG00000257150	NA	NA	NA	Score=763;Name=lod=1683	NA	12q22	NA	NA	NA	NA	rs2367558	0.33	0.33	0.321	0.341454	0.329	0.2599	0.3646	0.357	0.4008	0.33	0.27	0.34	0.37	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.005553	NA	NA	NA	NA	NA	0.21	NA	5.3376666
1118	2	90229260	90229260	T	C	intergenic	MIR4436A,LOC654342	dist=1117292;dist=1595449	NA	NA	exonic	ENSG00000211633	NA	nonsynonymous SNV	ENSG00000211633:ENST00000390278:exon2:c.T80C:p.I27T	Score=313;Name=lod=25	NA	2p11.2	NA	NA	NA	NA	rs842173	0.22	0.22	0.271	0.235623	0.164	0.0843	0.1455	0.5325	0.1278	0.18	0.06	0.14	0.54	0.1696	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.537245	NA	1	0.162346	0.495781	NA	0.254	NA	5.3373874
1118	2	29416615	29416615	G	A	exonic	ALK	NA	synonymous SNV	ALK:NM_004304:exon29:c.C4338T:p.T1446T	exonic	ENSG00000171094	NA	synonymous SNV	ENSG00000171094:ENST00000431873:exon4:c.C828T:p.T276T,ENSG00000171094:ENST00000389048:exon29:c.C4338T:p.T1446T	NA	NA	2p23.2	NA	NA	NA	NA	rs56132472	0.07	0.07	0.062	0.0591054	0.1233	0.001	0.0648	0.0779	0.0235	0.13	0.0017	0.07	0.07	0.0936	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.10836	NA	NA	0.112558	0.085111	NA	0.116	NA	5.3372086
1118	3	10379923	10379923	C	T	exonic	ATP2B2	NA	synonymous SNV	ATP2B2:NM_001683:exon19:c.G3222A:p.A1074A,ATP2B2:NM_001001331:exon22:c.G3357A:p.A1119A	exonic	ENSG00000157087	NA	synonymous SNV	ENSG00000157087:ENST00000452124:exon18:c.G2925A:p.A975A,ENSG00000157087:ENST00000383800:exon19:c.G3222A:p.A1074A,ENSG00000157087:ENST00000460129:exon19:c.G3222A:p.A1074A,ENSG00000157087:ENST00000343816:exon21:c.G3315A:p.A1105A,ENSG00000157087:ENST00000352432:exon21:c.G3357A:p.A1119A,ENSG00000157087:ENST00000397077:exon21:c.G3222A:p.A1074A,ENSG00000157087:ENST00000360273:exon22:c.G3357A:p.A1119A	NA	NA	3p25.3	NA	Name=CTCF	NA	NA	rs35678	0.53	0.53	0.499	0.567891	0.4274	0.5407	0.6455	0.5953	0.6483	0.42	0.58	0.59	0.59	0.487	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.428918	NA	NA	0.415116	0.536768	NA	0.558	NA	5.3371506
1118	9	101553014	101553014	G	T	intronic	ANKS6	NA	NA	NA	intronic	ENSG00000165138	NA	NA	NA	NA	NA	9q22.33	NA	Name=GATA-2	Name=4	NA	rs7038640	0.58	0.58	0.62	0.592652	0.663	0.3968	0.5331	0.7549	0.545	0.65	0.36	0.54	0.75	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.40072	NA	NA	NA	NA	NA	0.645	NA	5.337
1118	15	85721992	85721992	T	G	intergenic	PDE8A,LOC642423	dist=39616;dist=25915	NA	NA	ncRNA_exonic	ENSG00000259270	NA	NA	NA	Score=512;Name=lod=161	NA	15q25.3	NA	Name=HEY1	NA	NA	rs8039368	0.83	0.83	0.822	0.860224	0.663	0.9653	0.8026	0.9826	0.8303	0.67	0.97	0.75	0.98	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.023285	NA	NA	NA	NA	NA	0.891	NA	5.337
1118	9	122001000	122001000	G	A	exonic	DBC1	NA	synonymous SNV	DBC1:NM_014618:exon5:c.C618T:p.S206S	exonic	ENSG00000078725	NA	synonymous SNV	ENSG00000078725:ENST00000265922:exon5:c.C618T:p.S206S,ENSG00000078725:ENST00000373964:exon5:c.C618T:p.S206S	Score=640;Name=lod=532	NA	9q33.1	NA	NA	NA	NA	rs2274157	0.45	0.45	0.437	0.442093	0.4523	0.6736	0.4726	0.1664	0.544	0.46	0.68	0.46	0.16	0.4509	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.548344	1.548344	NA	0.426628	0.204267	ID=COSM150694;OCCURENCE=1(stomach)	0.355	NA	5.3368386
1118	3	195512343	195512343	G	A	exonic	MUC4	NA	synonymous SNV	MUC4:NM_018406:exon2:c.C6108T:p.T2036T	exonic	ENSG00000145113	NA	synonymous SNV	ENSG00000145113:ENST00000462323:exon2:c.C6108T:p.T2036T,ENSG00000145113:ENST00000463781:exon2:c.C6108T:p.T2036T,ENSG00000145113:ENST00000466475:exon2:c.C6108T:p.T2036T,ENSG00000145113:ENST00000470451:exon2:c.C6108T:p.T2036T,ENSG00000145113:ENST00000475231:exon2:c.C6108T:p.T2036T,ENSG00000145113:ENST00000477086:exon2:c.C6108T:p.T2036T,ENSG00000145113:ENST00000477756:exon2:c.C6108T:p.T2036T,ENSG00000145113:ENST00000478156:exon2:c.C6108T:p.T2036T,ENSG00000145113:ENST00000479406:exon2:c.C6108T:p.T2036T,ENSG00000145113:ENST00000480843:exon2:c.C6108T:p.T2036T	NA	NA	3q29	NA	NA	NA	NA	rs113457754	NA	NA	0.238	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3302	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.67059	NA	NA	NA	NA	ID=COSM149604,COSM149603;OCCURENCE=2(breast),1(stomach)	0.116	NA	5.3364666
1118	1	151372138	151372138	G	A	exonic	PSMB4	NA	synonymous SNV	PSMB4:NM_002796:exon1:c.G75A:p.P25P	exonic	ENSG00000159377	NA	synonymous SNV	ENSG00000159377:ENST00000290541:exon1:c.G75A:p.P25P	NA	NA	1q21.3	Score=778;Name=V$TAXCREB_01	Name=Pol2(b),TAF1,ELK4,GABP,Pol2,TCF4,Pol2(phosphoS2),TAF7_(SQ-8),ZNF263,Pol2-4H8,ZBTB7A_(SC-34508),NFKB,HEY1,GTF2B,TBP,RXRA	NA	NA	rs7172	0.49	0.49	0.509	0.493011	0.835	0.2123	0.4669	0.3321	0.6667	0.84	0.18	0.52	0.3	0.6746	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.575375	NA	NA	0.820698	0.38788	NA	0.601	NA	5.3363686
1118	17	3845927	3845927	A	G	exonic	ATP2A3	NA	synonymous SNV	ATP2A3:NM_005173:exon12:c.T1518C:p.T506T,ATP2A3:NM_174953:exon12:c.T1518C:p.T506T,ATP2A3:NM_174954:exon12:c.T1518C:p.T506T,ATP2A3:NM_174955:exon12:c.T1518C:p.T506T,ATP2A3:NM_174956:exon12:c.T1518C:p.T506T,ATP2A3:NM_174957:exon12:c.T1518C:p.T506T,ATP2A3:NM_174958:exon12:c.T1518C:p.T506T	exonic	ENSG00000074370	NA	synonymous SNV	ENSG00000074370:ENST00000309890:exon12:c.T1518C:p.T506T,ENSG00000074370:ENST00000352011:exon12:c.T1518C:p.T506T,ENSG00000074370:ENST00000359983:exon12:c.T1518C:p.T506T,ENSG00000074370:ENST00000397035:exon12:c.T1518C:p.T506T,ENSG00000074370:ENST00000397041:exon12:c.T1518C:p.T506T,ENSG00000074370:ENST00000397043:exon12:c.T1518C:p.T506T	NA	NA	17p13.2	Score=789;Name=V$ARP1_01	NA	NA	NA	rs17846889	0.39	0.39	0.354	0.384784	0.4553	0.0873	0.4712	0.584	0.2883	0.47	0.08	0.5	0.53	0.4154	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.327502	NA	NA	0.459767	0.570132	NA	0.355	NA	5.3361996
1118	7	100549873	100549873	G	A	intergenic	ACHE,MUC12	dist=56332;dist=63031	NA	NA	exonic	ENSG00000228273	NA	nonsynonymous SNV	ENSG00000228273:ENST00000379458:exon2:c.G454A:p.A152T	NA	NA	7q22.1	NA	NA	NA	NA	rs74193966	NA	NA	NA	0.000199681	NA	NA	NA	NA	0.001	NA	NA	NA	NA	0.4975	0.065	1	T	.	.	.	.	.	.	.	.	0	N	.	.	-0.980	T	0.030	T	0.109	1.671	11.55	0.306	0.060	-0.723	2.454	1.671007	1.671007	0.86	NA	NA	NA	0.058	NA	5.3358334
1118	5	140783596	140783596	C	T	exonic	PCDHGA9	NA	synonymous SNV	PCDHGA9:NM_018921:exon1:c.C1077T:p.D359D,PCDHGA9:NM_032089:exon1:c.C1077T:p.D359D	exonic	ENSG00000261934	NA	synonymous SNV	ENSG00000261934:ENST00000573521:exon1:c.C1077T:p.D359D	Score=355;Name=lod=37	NA	5q31.3	NA	NA	NA	NA	rs1363448	0.52	0.52	0.516	0.541733	0.4235	0.3274	0.6182	0.8427	0.4233	0.45	0.34	0.6	0.8	0.4745	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.115272	NA	NA	0.432877	0.805793	NA	0.543	NA	5.3357896
1119	1	244724092	244724092	G	A	exonic	C1orf101	NA	synonymous SNV	C1orf101:NM_001242340:exon7:c.G699A:p.S233S,C1orf101:NM_001130957:exon10:c.G1152A:p.S384S,C1orf101:NM_173807:exon10:c.G1152A:p.S384S	exonic	ENSG00000179397	NA	synonymous SNV	ENSG00000179397:ENST00000428042:exon6:c.G912A:p.S304S,ENSG00000179397:ENST00000366531:exon7:c.G699A:p.S233S,ENSG00000179397:ENST00000366533:exon10:c.G1152A:p.S384S,ENSG00000179397:ENST00000366534:exon10:c.G1152A:p.S384S	NA	NA	1q44	NA	NA	NA	NA	rs7544794	0.25	0.25	0.246	0.273163	0.0775	0.376	0.2435	0.4334	0.1728	0.07	0.36	0.23	0.43	0.1655	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.036557	NA	NA	0.088837	0.381298	NA	0.239	NA	5.3348296
1119	10	26939401	26939401	A	G	ncRNA_intronic	LINC00202-2	NA	NA	NA	ncRNA_intronic	ENSG00000231976	NA	NA	NA	NA	NA	10p12.1	NA	Name=PU.1	NA	NA	rs3101793	0.27	0.27	0.259	0.236621	0.332	0.3065	0.2161	0.1233	0.2342	0.35	0.33	0.24	0.11	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.521665	1.521665	NA	NA	NA	NA	0.232	NA	5.3346666
1119	10	97759583	97759583	T	C	ncRNA_intronic	ENTPD1-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000227805	NA	NA	NA	Score=733;Name=lod=1275	NA	10q24.1	NA	NA	NA	NA	rs2015026	0.33	0.33	0.28	0.292931	0.332	0.256	0.4078	0.233	0.2904	0.34	0.29	0.41	0.28	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.455067	NA	NA	NA	NA	NA	0.283	NA	5.3346666
1119	16	624713	624713	C	T	exonic	PIGQ	NA	synonymous SNV	PIGQ:NM_004204:exon2:c.C639T:p.C213C,PIGQ:NM_148920:exon2:c.C639T:p.C213C	exonic	ENSG00000007541	NA	synonymous SNV	ENSG00000007541:ENST00000026218:exon2:c.C639T:p.C213C,ENSG00000007541:ENST00000321878:exon2:c.C639T:p.C213C,ENSG00000007541:ENST00000409439:exon2:c.C639T:p.C213C,ENSG00000007541:ENST00000422307:exon2:c.C639T:p.C213C,ENSG00000007541:ENST00000443147:exon2:c.C681T:p.C227C,ENSG00000007541:ENST00000470411:exon2:c.C639T:p.C213C,ENSG00000007541:ENST00000409527:exon3:c.C639T:p.C213C	Score=349;Name=lod=35	NA	16p13.3	NA	NA	NA	NA	rs4984669	0.53	0.53	0.496	0.536542	0.4264	0.6349	0.4914	0.5053	0.6227	0.45	0.63	0.5	0.54	0.5018	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.903908	NA	NA	0.403869	0.483554	ID=COSM435480;OCCURENCE=1(breast)	0.449	NA	5.3345976
1119	22	24087319	24087319	A	C	exonic	ZNF70	NA	synonymous SNV	ZNF70:NM_021916:exon2:c.T9G:p.V3V	exonic	ENSG00000187792	NA	synonymous SNV	ENSG00000187792:ENST00000341976:exon2:c.T9G:p.V3V	NA	NA	22q11.23	NA	NA	NA	NA	rs2070451	0.17	0.17	0.164	0.166134	0.1034	0.2966	0.1225	0.1732	0.1176	0.12	0.3	0.1	0.13	0.1356	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.112727	NA	NA	0.093256	0.180209	NA	0.167	NA	5.3344106
1119	16	49672520	49672520	A	G	exonic	ZNF423	NA	synonymous SNV	ZNF423:NM_001271620:exon4:c.T363C:p.R121R,ZNF423:NM_015069:exon4:c.T543C:p.R181R	exonic	ENSG00000102935	NA	synonymous SNV	ENSG00000102935:ENST00000535559:exon2:c.T192C:p.R64R,ENSG00000102935:ENST00000567169:exon2:c.T192C:p.R64R,ENSG00000102935:ENST00000562871:exon3:c.T363C:p.R121R,ENSG00000102935:ENST00000561648:exon4:c.T543C:p.R181R,ENSG00000102935:ENST00000562520:exon4:c.T363C:p.R121R,ENSG00000102935:ENST00000563137:exon4:c.T363C:p.R121R,ENSG00000102935:ENST00000262383:exon5:c.T543C:p.R181R	Score=750;Name=lod=1495	NA	16q12.1	NA	NA	NA	NA	rs3803665	0.55	0.55	0.572	0.578674	0.4254	0.4603	0.4597	0.9115	0.4928	0.44	0.48	0.42	0.9	0.4796	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.426338	NA	NA	0.427558	0.848726	NA	0.486	NA	5.3341086
1119	5	178199558	178199558	C	G	ncRNA_exonic	AACSP1	NA	NA	NA	ncRNA_exonic	ENSG00000250420	NA	NA	NA	Score=578;Name=lod=297	NA	5q35.3	NA	NA	NA	NA	rs13354485	0.34	0.34	0.332	0.354633	0.333	0.2986	0.317	0.472	0.3027	0.34	0.28	0.31	0.45	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.337884	NA	NA	NA	NA	NA	0.239	NA	5.3336666
1119	7	100549703	100549703	C	T	intergenic	ACHE,MUC12	dist=56162;dist=63201	NA	NA	exonic	ENSG00000228273	NA	nonsynonymous SNV	ENSG00000228273:ENST00000379458:exon2:c.C284T:p.P95L	NA	NA	7q22.1	NA	NA	NA	NA	rs78164286	NA	NA	NA	0.00199681	NA	0.0069	0.0043	NA	NA	NA	NA	NA	NA	0.4999	0.48	0.31	T	.	.	.	.	.	.	.	.	0	N	.	.	-1.003	T	0.050	T	0.15	0.862	8.492	0.824	0.291	-0.098	5.983	0.862166	NA	1	NA	NA	NA	0.478	NA	5.3334334
1119	1	71437337	71437337	T	C	UTR3	PTGER3	NM_198719:c.*76A>G	NA	NA	UTR3	ENSG00000050628	ENST00000306666:c.*76A>G	NA	NA	NA	NA	1p31.1	NA	NA	NA	NA	NA	NA	NA	NA	0.000199681	NA	NA	0.0014	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.064932	NA	NA	NA	NA	NA	NA	NA	5.3333334
1119	1	145282093	145282093	G	A	UTR3	NOTCH2NL	NM_203458:c.*62G>A	NA	NA	UTR3	ENSG00000213240	ENST00000362074:c.*62G>A,ENST00000369340:c.*62G>A	NA	NA	NA	NA	1q21.1	NA	NA	Name=14	NA	rs976689	NA	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.483072	NA	NA	NA	NA	NA	NA	NA	5.3333334
1119	1	159804970	159804970	C	G	UTR3	C1orf204	NM_001134233:c.*977G>C	NA	NA	UTR3	ENSG00000188004	ENST00000368102:c.*977G>C	NA	NA	NA	NA	1q23.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.1706	NA	NA	NA	NA	NA	NA	NA	5.3333334
1119	2	91815539	91815539	A	G	intergenic	NONE,LOC654342	dist=NONE;dist=9170	NA	NA	intergenic	ENSG00000233991,ENSG00000143429	dist=6092;dist=7727	NA	NA	NA	NA	2p11.1	NA	Name=ZNF263,Pol2(b),GABP,USF-1,CTCF	Name=148	NA	rs1640020	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.195378	NA	NA	NA	NA	NA	0.5	NA	5.3333334
1119	2	133018770	133018770	T	C	intergenic	ANKRD30BL,GPR39	dist=3228;dist=155377	NA	NA	intergenic	ENSG00000221288,ENSG00000233786	dist=4117;dist=1131	NA	NA	Score=728;Name=lod=1217	NA	2q21.2	NA	NA	Name=147	NA	rs62165051	NA	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.017435	NA	NA	NA	NA	NA	0.435	NA	5.3333334
1119	2	133018785	133018785	T	C	intergenic	ANKRD30BL,GPR39	dist=3243;dist=155362	NA	NA	intergenic	ENSG00000221288,ENSG00000233786	dist=4132;dist=1116	NA	NA	Score=728;Name=lod=1217	NA	2q21.2	NA	NA	Name=147	NA	rs62165052	NA	NA	0.336	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.073333	NA	NA	NA	NA	NA	0.442	NA	5.3333334
1119	4	176733454	176733454	T	G	UTR5	GPM6A	NM_201591:c.-76A>C	NA	NA	UTR5	ENSG00000150625	ENST00000393658:c.-76A>C	NA	NA	NA	NA	4q34.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.720921	NA	NA	NA	NA	NA	NA	NA	5.3333334
1119	7	98994241	98994241	G	A	UTR3	PDAP1	NM_014891:c.*64C>T	NA	NA	UTR3	ENSG00000106244	ENST00000350498:c.*64C>T,ENST00000426447:c.*510C>T	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.41764	NA	NA	NA	NA	NA	NA	NA	5.3333334
1119	12	8073897	8073897	G	A	UTR3	SLC2A3	NM_006931:c.*112C>T	NA	NA	UTR3	ENSG00000059804	ENST00000075120:c.*112C>T	NA	NA	Score=425;Name=lod=71	NA	12p13.31	NA	NA	NA	NA	rs113911085	NA	NA	0.099	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.978064	NA	NA	NA	NA	NA	NA	NA	5.3333334
1119	12	8073901	8073901	T	C	UTR3	SLC2A3	NM_006931:c.*108A>G	NA	NA	UTR3	ENSG00000059804	ENST00000075120:c.*108A>G	NA	NA	Score=425;Name=lod=71	NA	12p13.31	NA	NA	NA	NA	rs111815763	NA	NA	0.117	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.067831	NA	NA	NA	NA	NA	NA	NA	5.3333334
1119	12	57335163	57335163	C	T	intergenic	SDR9C7,RDH16	dist=6974;dist=10053	NA	NA	intergenic	ENSG00000170426,ENSG00000139547	dist=6974;dist=10056	NA	NA	NA	NA	12q13.3	NA	Name=GR,c-Myc,FOSL2	Name=38	NA	rs66881926	NA	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.098995	NA	NA	NA	NA	NA	0.203	NA	5.3333334
1119	16	87436764	87436764	A	G	UTR3	MAP1LC3B	NM_022818:c.*61A>G	NA	NA	UTR3	ENSG00000140941	ENST00000268607:c.*61A>G,ENST00000570189:c.*384A>G,ENST00000564844:c.*1173A>G,ENST00000534986:c.*61A>G	NA	NA	Score=366;Name=lod=41	NA	16q24.2	NA	NA	NA	NA	rs1054528	0.79	0.79	0.67	NA	NA	NA	NA	NA	NA	0.93	0.96	0.84	0.32	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.30693	3.30693	NA	NA	NA	NA	0.717	NA	5.3333334
1119	17	25289503	25289503	T	C	intergenic	NONE,MIR4522	dist=NONE;dist=331433	NA	NA	intergenic	NONE,ENSG00000263433	dist=NONE;dist=19217	NA	NA	Score=531;Name=lod=192	NA	17q11.1	NA	Name=SUZ12	NA	NA	rs72839386	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.087	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.094163	NA	NA	NA	NA	NA	0.094	NA	5.3333334
1119	17	33767538	33767538	G	A	UTR3	SLFN13	NM_144682:c.*76C>T	NA	NA	UTR3	ENSG00000154760	ENST00000360502:c.*76C>T,ENST00000285013:c.*76C>T,ENST00000526861:c.*76C>T,ENST00000542635:c.*76C>T,ENST00000530782:c.*1739C>T,ENST00000534689:c.*76C>T,ENST00000533791:c.*76C>T	NA	NA	NA	NA	17q12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.129428	NA	NA	NA	NA	NA	NA	NA	5.3333334
1119	X	102930960	102930960	A	G	UTR3	MORF4L2	NM_001142432:c.*129T>C,NM_001142419:c.*129T>C,NM_001142427:c.*129T>C,NM_001142426:c.*129T>C,NM_001142425:c.*129T>C,NM_001142424:c.*129T>C,NM_012286:c.*129T>C,NM_001142428:c.*129T>C,NM_001142429:c.*129T>C,NM_001142430:c.*129T>C,NM_001142431:c.*129T>C,NM_001142418:c.*129T>C,NM_001142422:c.*129T>C,NM_001142421:c.*129T>C,NM_001142420:c.*129T>C,NM_001142423:c.*129T>C	NA	NA	UTR3	ENSG00000123562	ENST00000360458:c.*129T>C,ENST00000451301:c.*129T>C,ENST00000422154:c.*129T>C,ENST00000433176:c.*129T>C,ENST00000372620:c.*129T>C,ENST00000423833:c.*129T>C,ENST00000441076:c.*129T>C	NA	NA	Score=531;Name=lod=192	NA	Xq22.2	NA	NA	NA	NA	rs874	0.4	0.4	0.37997	NA	NA	NA	NA	NA	NA	0.45	0.63	0.41	0.07	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.116248	NA	NA	NA	NA	NA	0.312	NA	5.3333334
1119	Y	28817238	28817238	G	A	intergenic	TTTY3B,NONE	dist=937703;dist=NONE	NA	NA	intergenic	ENSG00000237917,NONE	dist=36439;dist=NONE	NA	NA	NA	NA	Yq12	NA	NA	Name=61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.595372	NA	NA	NA	NA	NA	NA	NA	5.3333334
1119	1	168025400	168025400	G	C	intronic	DCAF6	NA	NA	NA	ncRNA_exonic	ENSG00000224837	NA	NA	NA	Score=713;Name=lod=1050	NA	1q24.2	NA	NA	NA	NA	rs3977721	NA	NA	0.535	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.221171	NA	NA	NA	NA	NA	0.551	NA	5.3333333
1119	1	168025409	168025409	A	G	intronic	DCAF6	NA	NA	NA	ncRNA_exonic	ENSG00000224837	NA	NA	NA	Score=713;Name=lod=1050	NA	1q24.2	NA	NA	NA	NA	rs3977722	NA	NA	0.559	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.830545	1.830545	NA	NA	NA	NA	0.551	NA	5.3333333
1119	1	214656333	214656333	G	A	intronic	PTPN14	NA	NA	NA	ncRNA_exonic	ENSG00000213036	NA	NA	NA	Score=599;Name=lod=362	NA	1q41	NA	NA	NA	NA	rs75490133	NA	NA	0.281	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.385876	NA	NA	NA	NA	NA	0.196	NA	5.3333333
1119	1	214656362	214656362	T	C	intronic	PTPN14	NA	NA	NA	ncRNA_exonic	ENSG00000213036	NA	NA	NA	Score=715;Name=lod=1073	NA	1q41	NA	NA	NA	NA	rs79153607	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.968861	NA	NA	NA	NA	NA	0.486	NA	5.3333333
1119	1	214656378	214656378	C	T	intronic	PTPN14	NA	NA	NA	ncRNA_exonic	ENSG00000213036	NA	NA	NA	Score=715;Name=lod=1073	NA	1q41	NA	NA	NA	NA	rs75388246	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.710466	1.710466	NA	NA	NA	NA	0.478	NA	5.3333333
1119	1	214656413	214656413	T	C	intronic	PTPN14	NA	NA	NA	ncRNA_exonic	ENSG00000213036	NA	NA	NA	Score=715;Name=lod=1073	NA	1q41	NA	NA	NA	NA	rs74407488	NA	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.035305	2.035305	NA	NA	NA	NA	0.333	NA	5.3333333
1119	1	214656464	214656464	G	T	intronic	PTPN14	NA	NA	NA	ncRNA_exonic	ENSG00000213036	NA	NA	NA	Score=715;Name=lod=1073	NA	1q41	NA	NA	NA	NA	rs75275552	NA	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.28192	1.28192	NA	NA	NA	NA	NA	NA	5.3333333
1119	1	214656500	214656500	T	C	intronic	PTPN14	NA	NA	NA	ncRNA_exonic	ENSG00000213036	NA	NA	NA	Score=715;Name=lod=1073	NA	1q41	NA	NA	NA	NA	rs76083445	NA	NA	0.295	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.378912	1.378912	NA	NA	NA	NA	0.406	NA	5.3333333
1119	1	214656575	214656575	C	T	intronic	PTPN14	NA	NA	NA	ncRNA_exonic	ENSG00000213036	NA	NA	NA	Score=715;Name=lod=1073	NA	1q41	NA	NA	NA	NA	rs74142715	NA	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.520211	1.520211	NA	NA	NA	NA	0.225	NA	5.3333333
1119	1	214656668	214656668	G	C	intronic	PTPN14	NA	NA	NA	ncRNA_exonic	ENSG00000213036	NA	NA	NA	Score=715;Name=lod=1073	NA	1q41	NA	NA	NA	NA	rs55783822	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.397876	NA	NA	NA	NA	NA	NA	NA	5.3333333
1119	1	214656669	214656669	C	T	intronic	PTPN14	NA	NA	NA	ncRNA_exonic	ENSG00000213036	NA	NA	NA	Score=715;Name=lod=1073	NA	1q41	NA	NA	NA	NA	rs59683713	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.911785	NA	NA	NA	NA	NA	NA	NA	5.3333333
1119	1	214656697	214656697	C	T	intronic	PTPN14	NA	NA	NA	ncRNA_exonic	ENSG00000213036	NA	NA	NA	Score=471;Name=lod=109	NA	1q41	NA	NA	NA	NA	rs3795525	0.2	0.2	0.162	NA	NA	NA	NA	NA	NA	0.28	0.14	0.24	0.13	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.104336	NA	NA	NA	NA	NA	0.181	NA	5.3333333
1119	1	248247713	248247713	C	T	intronic	OR2L13	NA	NA	NA	ncRNA_exonic	ENSG00000197067	NA	NA	NA	Score=419;Name=lod=67	NA	1q44	NA	NA	NA	NA	rs12034735	0.08	0.08	0.059	NA	NA	NA	NA	NA	NA	0.06	0.12	0.02	0.12	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.629858	1.629858	NA	NA	NA	NA	0.051	NA	5.3333333
1119	2	3651757	3651757	G	C	intronic	COLEC11	NA	NA	NA	ncRNA_exonic	ENSG00000237370	NA	NA	NA	NA	NA	2p25.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.482244	NA	NA	NA	NA	NA	NA	NA	5.3333333
1119	2	175613059	175613059	A	G	intronic	CHRNA1	NA	NA	NA	ncRNA_intronic	ENSG00000236449	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.794656	NA	NA	NA	NA	NA	NA	NA	5.3333333
1119	4	65077	65077	A	T	intronic	ZNF595,ZNF718	NA	NA	NA	ncRNA_exonic	ENSG00000207643	NA	NA	NA	NA	NA	4p16.3	NA	NA	Name=34	NA	rs4112055	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.543836	NA	NA	NA	NA	NA	0.5	NA	5.3333333
1119	6	129478911	129478911	G	C	intronic	LAMA2	NA	NA	NA	ncRNA_exonic	ENSG00000219642	NA	NA	NA	Score=800;Name=lod=2376	NA	6q22.33	NA	NA	NA	NA	rs11757127	NA	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.728692	NA	NA	NA	NA	NA	NA	NA	5.3333333
1119	6	129478995	129478995	G	A	intronic	LAMA2	NA	NA	NA	ncRNA_exonic	ENSG00000219642	NA	NA	NA	Score=800;Name=lod=2376	NA	6q22.33	NA	NA	NA	NA	rs11757146	NA	NA	0.315	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.262116	NA	NA	NA	NA	NA	NA	NA	5.3333333
1119	8	29931663	29931663	C	G	ncRNA_intronic	MIR548O2	NA	NA	NA	intronic	ENSG00000133872	NA	NA	NA	NA	NA	8p12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.33834	NA	NA	NA	NA	NA	NA	NA	5.3333333
1119	10	46965640	46965640	G	A	intronic	SYT15	NA	NA	NA	ncRNA_intronic	ENSG00000231187	NA	NA	NA	NA	NA	10q11.22	NA	Name=c-Myc	NA	NA	rs3737223	0.1	0.1	0.075	NA	NA	NA	NA	NA	NA	0.11	0.04	0.09	0.17	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.125754	NA	NA	NA	NA	NA	0.101	NA	5.3333333
1119	12	123466688	123466688	G	A	intronic	ARL6IP4	NA	NA	NA	ncRNA_intronic	ENSG00000256028	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.059683	NA	NA	NA	NA	NA	NA	NA	5.3333333
1119	15	76552928	76552928	T	C	intronic	ETFA	NA	NA	NA	ncRNA_exonic	ENSG00000259581	NA	NA	NA	Score=317;Name=lod=26	NA	15q24.2	NA	NA	NA	NA	rs376914006	NA	NA	0.064	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.527596	NA	NA	NA	NA	NA	NA	NA	5.3333333
1119	15	76552974	76552974	A	G	intronic	ETFA	NA	NA	NA	ncRNA_exonic	ENSG00000259581	NA	NA	NA	Score=503;Name=lod=148	NA	15q24.2	NA	NA	NA	NA	rs78958410	NA	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.10024	NA	NA	NA	NA	NA	NA	NA	5.3333333
1119	15	76553050	76553050	T	C	intronic	ETFA	NA	NA	NA	ncRNA_exonic	ENSG00000259581	NA	NA	NA	Score=503;Name=lod=148	NA	15q24.2	NA	NA	NA	NA	rs77148253	NA	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.548464	NA	NA	NA	NA	NA	0.014	NA	5.3333333
1119	15	76553124	76553124	A	G	intronic	ETFA	NA	NA	NA	ncRNA_exonic	ENSG00000259581	NA	NA	NA	Score=503;Name=lod=148	NA	15q24.2	NA	NA	NA	NA	rs80012725	NA	NA	0.028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.406743	NA	NA	NA	NA	NA	NA	NA	5.3333333
1119	15	76553327	76553327	T	C	intronic	ETFA	NA	NA	NA	ncRNA_exonic	ENSG00000259581	NA	NA	NA	Score=568;Name=lod=271	NA	15q24.2	NA	NA	NA	NA	rs113155777	NA	NA	0.009	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.065	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.052871	NA	NA	NA	NA	NA	0.043	NA	5.3333333
1119	15	76553333	76553333	C	T	intronic	ETFA	NA	NA	NA	ncRNA_exonic	ENSG00000259581	NA	NA	NA	Score=568;Name=lod=271	NA	15q24.2	NA	NA	NA	NA	rs62030244	0.13	0.13	0.048	NA	NA	NA	NA	NA	NA	0.21	0.03	0.2	0.05	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.532107	NA	NA	NA	NA	NA	0.058	NA	5.3333333
1119	15	76553368	76553368	A	G	intronic	ETFA	NA	NA	NA	ncRNA_exonic	ENSG00000259581	NA	NA	NA	Score=568;Name=lod=271	NA	15q24.2	NA	NA	NA	NA	rs113033853	NA	NA	0.055	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.258611	NA	NA	NA	NA	NA	0.029	NA	5.3333333
1119	15	76553389	76553389	A	T	intronic	ETFA	NA	NA	NA	ncRNA_exonic	ENSG00000259581	NA	NA	NA	Score=568;Name=lod=271	NA	15q24.2	NA	NA	NA	NA	rs78805302	NA	NA	0.048	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.142734	NA	NA	NA	NA	NA	0.014	NA	5.3333333
1119	15	76553401	76553401	A	G	intronic	ETFA	NA	NA	NA	ncRNA_exonic	ENSG00000259581	NA	NA	NA	Score=568;Name=lod=271	NA	15q24.2	NA	NA	NA	NA	rs77851137	NA	NA	0.031	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.590033	NA	NA	NA	NA	NA	0.014	NA	5.3333333
1119	15	76553420	76553420	A	C	intronic	ETFA	NA	NA	NA	ncRNA_exonic	ENSG00000259581	NA	NA	NA	Score=568;Name=lod=271	NA	15q24.2	NA	NA	NA	NA	rs371771039	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.312702	NA	NA	NA	NA	NA	NA	NA	5.3333333
1119	15	76553428	76553428	C	T	intronic	ETFA	NA	NA	NA	ncRNA_exonic	ENSG00000259581	NA	NA	NA	Score=568;Name=lod=271	NA	15q24.2	NA	NA	NA	NA	rs376627724	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.590008	NA	NA	NA	NA	NA	0.007	NA	5.3333333
1119	15	76553434	76553434	A	G	intronic	ETFA	NA	NA	NA	ncRNA_exonic	ENSG00000259581	NA	NA	NA	Score=568;Name=lod=271	NA	15q24.2	NA	NA	NA	NA	rs368461920	NA	NA	0.005	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.427404	NA	NA	NA	NA	NA	0.007	NA	5.3333333
1119	15	76553486	76553486	A	G	intronic	ETFA	NA	NA	NA	ncRNA_exonic	ENSG00000259581	NA	NA	NA	Score=568;Name=lod=271	NA	15q24.2	NA	NA	NA	NA	rs76144335	NA	NA	0.055	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.419586	NA	NA	NA	NA	NA	0.007	NA	5.3333333
1119	15	76553500	76553500	A	G	intronic	ETFA	NA	NA	NA	ncRNA_exonic	ENSG00000259581	NA	NA	NA	Score=568;Name=lod=271	NA	15q24.2	NA	NA	NA	NA	rs113576573	NA	NA	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.741479	NA	NA	NA	NA	NA	0.007	NA	5.3333333
1119	16	600880	600880	T	G	intronic	SOLH	NA	NA	NA	ncRNA_intronic	ENSG00000261691	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.067451	NA	NA	NA	NA	NA	NA	NA	5.3333333
1119	17	20135029	20135029	C	G	intronic	SPECC1	NA	NA	NA	ncRNA_intronic	ENSG00000263494	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.49955	NA	NA	NA	NA	NA	NA	NA	5.3333333
1119	19	41312319	41312319	G	A	ncRNA_intronic	RAB4B-EGLN2	NA	NA	NA	intronic	ENSG00000171570,ENSG00000268797,ENSG00000269858	NA	NA	NA	NA	NA	19q13.2	NA	NA	Name=4	NA	rs78589870	0.03	0.03	0.029	0.029353	NA	NA	0.0173	0.1021	NA	NA	NA	0.03	0.12	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.26433	1.26433	NA	NA	NA	NA	0.022	NA	5.3333333
1119	20	29632831	29632831	T	G	ncRNA_intronic	FRG1B	NA	NA	NA	intronic	ENSG00000149531	NA	NA	NA	NA	NA	20q11.21	NA	NA	Name=11	NA	rs148344088	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.300705	NA	NA	NA	NA	NA	NA	NA	5.3333333
1119	20	29632832	29632832	A	C	ncRNA_intronic	FRG1B	NA	NA	NA	intronic	ENSG00000149531	NA	NA	NA	NA	NA	20q11.21	NA	NA	Name=11	NA	rs12162451	NA	NA	0.466	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.862093	NA	NA	NA	NA	NA	NA	NA	5.3333333
1119	21	11029565	11029565	G	A	intronic	BAGE2,BAGE3,BAGE4,BAGE5	NA	NA	NA	ncRNA_intronic	ENSG00000187172	NA	NA	NA	Score=699;Name=lod=922	NA	21p11.1	NA	NA	NA	NA	rs7510046	NA	NA	0.286	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.429314	NA	NA	NA	NA	NA	NA	NA	5.3333333
1119	21	11039487	11039487	A	C	intronic	BAGE2,BAGE3,BAGE4,BAGE5	NA	NA	NA	ncRNA_intronic	ENSG00000187172	NA	NA	NA	NA	NA	21p11.1	NA	NA	Name=6	NA	rs596858	NA	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.559932	NA	NA	NA	NA	NA	0.152	NA	5.3333333
1119	21	11046650	11046650	C	G	intronic	BAGE2,BAGE3,BAGE4,BAGE5	NA	NA	NA	ncRNA_intronic	ENSG00000187172	NA	NA	NA	NA	NA	21p11.1	NA	NA	Name=4	NA	rs2979622	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.234153	NA	NA	NA	NA	NA	0.08	NA	5.3333333
1119	22	40271614	40271614	C	G	intronic	ENTHD1	NA	NA	NA	ncRNA_exonic	ENSG00000226085	NA	NA	NA	Score=732;Name=lod=1264	NA	22q13.1	NA	NA	NA	NA	rs137945	NA	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.693469	NA	NA	NA	NA	NA	0.587	NA	5.3333333
1119	19	53754820	53754820	T	C	UTR5	ZNF677	NM_182609:c.-17A>G	NA	NA	UTR5	ENSG00000197928	ENST00000333952:c.-17A>G,ENST00000598513:c.-17A>G,ENST00000594517:c.-17A>G,ENST00000599012:c.-17A>G,ENST00000594681:c.-17A>G,ENST00000598806:c.-17A>G,ENST00000601828:c.-17A>G,ENST00000601413:c.-17A>G	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00009076	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.592753	NA	NA	NA	NA	NA	NA	NA	5.3332426
1119	16	2580208	2580208	A	G	UTR3	CEMP1	NM_001048212:c.*123T>C	NA	NA	UTR3	ENSG00000162066,ENSG00000205923	ENST00000302956:c.*644A>G;ENST00000382350:c.*123T>C,ENST00000567119:c.*123T>C	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.669807	NA	NA	NA	NA	NA	NA	NA	5.3332334
1119	5	153382518	153382518	G	A	exonic	FAM114A2	NA	synonymous SNV	FAM114A2:NM_018691:exon10:c.C1005T:p.T335T	exonic	ENSG00000055147	NA	synonymous SNV	ENSG00000055147:ENST00000520313:exon9:c.C795T:p.T265T,ENSG00000055147:ENST00000351797:exon10:c.C1005T:p.T335T,ENSG00000055147:ENST00000522858:exon10:c.C1005T:p.T335T,ENSG00000055147:ENST00000520667:exon11:c.C1005T:p.T335T	NA	NA	5q33.2	NA	NA	NA	NA	rs34136150	0.1	0.1	0.106	0.0930511	0.1143	0.0179	0.0764	0.1891	0.0307	0.11	0.02	0.09	0.19	0.0974	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.569863	NA	NA	0.12186	0.156378	NA	0.123	NA	5.3331066
1119	15	81628871	81628871	T	C	intronic	TMC3	NA	NA	NA	ncRNA_intronic	ENSG00000259343	NA	NA	NA	Score=415;Name=lod=65	NA	15q25.1	NA	NA	NA	NA	rs139364886	0.02	0.02	0.019	0.0259585	NA	NA	0.0043	0.0961	NA	NA	NA	0.0028	0.09	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.026086	NA	NA	0.000314	0.065751	NA	0.043	NA	5.3330193
1119	13	111590550	111590550	A	G	intergenic	ANKRD10,ARHGEF7	dist=23134;dist=177074	NA	NA	ncRNA_exonic	ENSG00000227105	NA	NA	NA	Score=628;Name=lod=474	NA	13q34	NA	NA	Name=3	NA	rs9515318	0.58	0.58	0.731	0.572085	0.667	0.754	0.5836	0.382	0.5358	0.61	0.71	0.56	0.38	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.669114	1.669114	NA	NA	NA	NA	0.63	NA	5.333
1119	2	25048890	25048890	G	A	intronic	ADCY3	NA	NA	NA	ncRNA_exonic	ENSG00000271936	NA	NA	NA	NA	NA	2p23.3	NA	NA	Name=52	NA	rs200802595	0.0005	0.0005	NA	0.000199681	NA	NA	0.0014	NA	NA	NA	NA	0.0028	NA	0.00006988	0.0028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.64031	NA	NA	0.000349	0	NA	NA	NA	5.3329144
1119	22	42504918	42504918	G	A	ncRNA_intronic	NDUFA6-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000213790	NA	NA	NA	Score=728;Name=lod=1210	NA	22q13.2	NA	NA	NA	NA	rs8141702	0.28	0.28	0.26	0.296326	0.334	0.1498	0.317	0.323	0.3579	0.33	0.17	0.3	0.33	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.458304	1.458304	NA	NA	NA	NA	0.29	NA	5.3326666
1119	6	31133943	31133943	C	A	UTR5	POU5F1	NM_203289:c.-224G>T	NA	NA	UTR5	ENSG00000204531	ENST00000513407:c.-527G>T,ENST00000471529:c.-527G>T	NA	NA	NA	NA	6p21.33	NA	NA	Name=3	NA	rs3130932	0.68	0.68	0.675	0.68131	0.668	0.6419	0.6686	0.8033	0.5798	0.66	0.59	0.68	0.81	0.6766	0.81	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-1.075	T	0.064	T	.	0.661	7.541	2.31	0.890	0.785	7.573	0.660691	NA	0	0.656264	0.795008	NA	0.703	NA	5.3324694
1119	2	98823792	98823792	A	C	intronic	VWA3B	NA	NA	NA	ncRNA_exonic	ENSG00000231635	NA	NA	NA	Score=828;Name=lod=3078	NA	2q11.2	NA	NA	NA	NA	rs189839061	0.0014	0.0014	NA	0.00119808	0.001	NA	0.0072	NA	NA	NA	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.459255	NA	NA	NA	NA	NA	NA	NA	5.3323333
1119	6	73765067	73765067	G	A	intronic	KCNQ5	NA	NA	NA	ncRNA_exonic	ENSG00000220515	NA	NA	NA	Score=753;Name=lod=1530	NA	6q13	NA	NA	NA	NA	rs73535934	0.04	0.04	0.044	0.0509185	0.001	NA	0.013	0.18	0.0072	NA	NA	0.01	0.15	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.351566	NA	NA	NA	NA	NA	0.072	NA	5.3323333
1119	21	33079155	33079155	A	T	intronic	SCAF4	NA	NA	NA	ncRNA_exonic	ENSG00000229046	NA	NA	NA	Score=587;Name=lod=323	NA	21q22.11	NA	NA	NA	NA	rs142612018	0.0027	0.0027	0.004	0.00399361	0.001	NA	NA	0.0144	NA	NA	NA	NA	0.01	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.092214	NA	NA	NA	NA	NA	NA	NA	5.3323333
1119	22	42463689	42463689	T	C	intronic	NAGA	NA	NA	NA	intronic	ENSG00000198951	NA	NA	NA	NA	NA	22q13.2	NA	Name=AP-2gamma,AP-2alpha	Name=2	NA	rs133368	0.66	0.66	0.648	0.644369	0.668	0.8522	0.6744	0.4493	0.6483	0.67	0.84	0.69	0.43	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.208474	NA	NA	NA	NA	NA	0.616	NA	5.332
1119	7	107834734	107834734	C	T	exonic	NRCAM	NA	synonymous SNV	NRCAM:NM_001037132:exon13:c.G1602A:p.A534A,NRCAM:NM_001193583:exon15:c.G1545A:p.A515A,NRCAM:NM_001193584:exon15:c.G1545A:p.A515A,NRCAM:NM_005010:exon15:c.G1584A:p.A528A,NRCAM:NM_001193582:exon16:c.G1602A:p.A534A	exonic	ENSG00000091129	NA	synonymous SNV	ENSG00000091129:ENST00000425651:exon13:c.G1602A:p.A534A,ENSG00000091129:ENST00000351718:exon15:c.G1584A:p.A528A,ENSG00000091129:ENST00000379024:exon15:c.G1545A:p.A515A,ENSG00000091129:ENST00000379028:exon16:c.G1602A:p.A534A,ENSG00000091129:ENST00000413765:exon16:c.G1545A:p.A515A,ENSG00000091129:ENST00000379022:exon17:c.G1602A:p.A534A	Score=506;Name=lod=152	NA	7q31.1	NA	Name=MafF_(M8194),MafK_(SC-477),MafK_(ab50322)	NA	NA	rs404287	0.73	0.73	0.703	0.697684	0.7992	0.88	0.8012	0.4402	0.68	0.8	0.88	0.8	0.4	0.7559	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.320105	1.320105	NA	0.779767	0.506582	NA	0.609	NA	5.3317996
1119	2	209358027	209358027	C	T	exonic	PTH2R	NA	synonymous SNV	PTH2R:NM_005048:exon13:c.C1296T:p.N432N	exonic	ENSG00000144407	NA	synonymous SNV	ENSG00000144407:ENST00000272847:exon13:c.C1296T:p.N432N	Score=346;Name=lod=34	NA	2q34	NA	NA	Name=4	NA	rs3820900	0.73	0.73	0.713	0.741014	0.7753	0.5417	0.8127	0.8631	0.6953	0.77	0.54	0.82	0.83	0.7786	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.003269	NA	NA	0.781163	0.864049	NA	0.826	NA	5.3316036
1119	3	52408193	52408193	A	G	intronic	DNAH1	NA	NA	NA	ncRNA_exonic	ENSG00000239557	NA	NA	NA	Score=799;Name=lod=2364	NA	3p21.1	NA	NA	NA	NA	rs138276682	0.0009	0.0009	0.001	0.000399361	0.002	NA	NA	NA	NA	0.0026	NA	NA	NA	NA	0.0026	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.074893	NA	NA	NA	NA	NA	NA	NA	5.3313333
1119	8	22350200	22350200	A	G	intronic	PPP3CC	NA	NA	NA	ncRNA_exonic	ENSG00000254272	NA	NA	NA	Score=743;Name=lod=1391	NA	8p21.3	NA	NA	NA	NA	rs74985144	0.08	0.08	0.091	0.095647	0.002	0.0893	0.0447	0.2564	0.0174	NA	0.06	0.05	0.25	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.150846	NA	NA	NA	NA	NA	0.08	NA	5.3313333
1119	11	118431452	118431452	C	T	intronic	IFT46	NA	NA	NA	ncRNA_exonic	ENSG00000243431	NA	NA	NA	Score=809;Name=lod=2592	NA	11q23.3	NA	NA	NA	NA	rs143305187	0.0037	0.0037	0.002	0.00658946	0.002	0.0109	0.0014	0.0061	0.0112	0.0026	0.01	0.0028	0.002	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.653192	NA	NA	NA	NA	NA	NA	NA	5.3313333
1119	22	40146156	40146156	C	T	intronic	ENTHD1	NA	NA	NA	ncRNA_exonic	ENSG00000235647	NA	NA	NA	NA	NA	22q13.1	NA	NA	NA	NA	NA	NA	NA	NA	0.000399361	0.002	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.276183	2.276183	NA	NA	NA	NA	0.007	NA	5.3313333
1119	19	55708573	55708573	G	A	exonic	PTPRH	NA	synonymous SNV	PTPRH:NM_001161440:exon7:c.C1368T:p.A456A,PTPRH:NM_002842:exon9:c.C1902T:p.A634A	exonic	ENSG00000080031	NA	synonymous SNV	ENSG00000080031:ENST00000263434:exon7:c.C1368T:p.A456A,ENSG00000080031:ENST00000376350:exon9:c.C1902T:p.A634A	NA	NA	19q13.42	NA	NA	NA	NA	rs2288520	0.07	0.07	0.064	0.0690895	0.1262	0.0536	0.0706	0.0151	0.0982	0.13	0.05	0.08	0.01	0.0952	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.153755	NA	NA	0.113953	0.027463	NA	0.101	NA	5.3313136
1119	10	37508450	37508450	A	C	exonic	ANKRD30A	NA	synonymous SNV	ANKRD30A:NM_052997:exon34:c.A3642C:p.A1214A	exonic	ENSG00000148513	NA	synonymous SNV	ENSG00000148513:ENST00000361713:exon34:c.A3642C:p.A1214A,ENSG00000148513:ENST00000602533:exon34:c.A3642C:p.A1214A,ENSG00000148513:ENST00000374660:exon40:c.A3999C:p.A1333A	NA	Name=Metabolite levels	10p11.21	NA	NA	NA	NA	rs1148259	0.49	0.49	0.49	0.533546	0.4125	0.6746	0.5	0.382	0.7413	0.4	0.71	0.46	0.38	0.4997	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.498382	NA	NA	0.42318	0.37654	NA	0.478	NA	5.3312866
1119	11	21581805	21581805	C	T	exonic	NELL1	NA	synonymous SNV	NELL1:NM_201551:exon16:c.C1716T:p.G572G,NELL1:NM_006157:exon17:c.C1857T:p.G619G	exonic	ENSG00000165973	NA	synonymous SNV	ENSG00000165973:ENST00000325319:exon16:c.C1686T:p.G562G,ENSG00000165973:ENST00000532434:exon16:c.C1716T:p.G572G,ENSG00000165973:ENST00000357134:exon17:c.C1857T:p.G619G,ENSG00000165973:ENST00000298925:exon18:c.C1941T:p.G647G	Score=623;Name=lod=452	NA	11p15.1	Score=874;Name=V$SPZ1_01	NA	NA	NA	rs8176789	0.62	0.62	0.586	0.543131	0.8101	0.5774	0.634	0.2481	0.5675	0.81	0.63	0.65	0.28	0.7068	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.187783	NA	NA	0.818605	0.36995	NA	0.623	NA	5.3311616
1119	1	55134623	55134623	C	G	ncRNA_intronic	HEATR8-TTC4	NA	NA	NA	intronic	ENSG00000184313,ENSG00000271723	NA	NA	NA	NA	NA	1p32.3	NA	Name=CTCF	NA	NA	rs116481805	0.01	0.01	0.006	0.0091853	NA	NA	0.0043	0.0325	NA	NA	NA	0.01	0.02	0.0022	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.33081	1.33081	NA	0.000245	0.019533	NA	0.007	NA	5.3308883
1119	17	19641834	19641834	C	T	intronic	ALDH3A1	NA	NA	NA	ncRNA_exonic	ENSG00000264785	NA	NA	NA	NA	NA	17p11.2	NA	Name=Pol2	NA	NA	rs79434246	0.0027	0.0027	0.001	0.00139776	0.003	NA	0.0058	NA	NA	0.004	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.194879	NA	NA	NA	NA	NA	NA	NA	5.3303333
1119	9	135804266	135804266	G	A	UTR5	TSC1	NM_000368:c.-7C>T,NM_001162427:c.-7C>T,NM_001162426:c.-7C>T	NA	NA	UTR5	ENSG00000165699	ENST00000298552:c.-7C>T,ENST00000545250:c.-7C>T,ENST00000440111:c.-7C>T,ENST00000403810:c.-7C>T	NA	NA	NA	NA	9q34.13	NA	NA	NA	NA	rs62621221	0.0009	0.0009	NA	0.000399361	0.001	NA	0.0014	NA	NA	0.0013	NA	0.0028	NA	0.0013	0.0028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.193053	NA	NA	0.000814	0.000227	NA	NA	CLINSIG=untested|non-pathogenic;CLNDBN=Tuberous_sclerosis_syndrome|not_provided;CLNREVSTAT=not|single;CLNACC=RCV000054968.1|RCV000125621.1;CLNDSDB=GeneReviews:MedGen:OMIM:SNOMED_CT|.;CLNDSDBID=NBK1220:C0041341:191100:7199000|.	5.3302194
1119	8	129162497	129162497	A	C	downstream	MIR1208	NA	NA	NA	downstream	ENSG00000221261	NA	NA	NA	NA	NA	8q24.21	NA	Name=GR,FOSL1_(SC-183),p300,Pol2,eGFP-JunD,GATA2_(CG2-96),eGFP-JunB,JunD,FOSL2,Egr-1,c-Jun	Name=60	NA	rs10956412	0.21	0.21	0.217	0.221645	0.171	0.2302	0.1816	0.23	0.2822	0.18	0.25	0.17	0.25	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.791584	NA	NA	0.165619	0.202312	NA	0.225	NA	5.3300476
1119	22	42473603	42473603	C	T	exonic	FAM109B	NA	synonymous SNV	FAM109B:NM_001002034:exon3:c.C306T:p.A102A	exonic	ENSG00000177096	NA	synonymous SNV	ENSG00000177096:ENST00000321753:exon3:c.C306T:p.A102A,ENSG00000177096:ENST00000419475:exon3:c.C306T:p.A102A	NA	NA	22q13.2	NA	NA	NA	Score=150;Name=1504153_0_+_150	rs133383	0.35	0.35	0.289	0.327476	0.4592	0.2917	0.4971	0.053	0.4796	0.47	0.33	0.5	0.06	0.4372	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.482102	NA	NA	0.440233	0.118702	NA	0.167	NA	5.3300336
1119	4	100009738	100009738	G	C	intronic	ADH5	NA	NA	NA	intronic	ENSG00000197894	NA	NA	NA	NA	NA	4q23	NA	Name=YY1_(C-20),Pol2-4H8,Pol2,Pol2(phosphoS2),YY1,TAF1,TBP,RXRA,CCNT2,HEY1	Name=146	NA	rs1154401	0.77	0.77	0.71	0.788738	0.67	0.999	0.755	0.6747	0.8722	0.67	1	0.73	0.66	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.858757	NA	NA	NA	NA	NA	NA	NA	5.33
1119	3	132277866	132277866	G	A	exonic	ACAD11	NA	synonymous SNV	ACAD11:NM_032169:exon20:c.C2292T:p.I764I	exonic	ENSG00000240303	NA	synonymous SNV	ENSG00000240303:ENST00000355458:exon18:c.C1980T:p.I660I,ENSG00000240303:ENST00000545291:exon18:c.C867T:p.I289I,ENSG00000240303:ENST00000264990:exon20:c.C2292T:p.I764I	NA	NA	3q22.1	NA	NA	NA	NA	rs2270801	0.1	0.1	0.081	0.0890575	0.1123	0.0972	0.134	0.0053	0.138	0.13	0.1	0.14	0.01	0.115	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.090737	NA	NA	0.109677	0.024966	NA	0.065	NA	5.3296896
1119	22	42504679	42504679	A	G	ncRNA_intronic	NDUFA6-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000213790	NA	NA	NA	Score=728;Name=lod=1210	NA	22q13.2	NA	NA	NA	NA	rs6002616	0.31	0.31	0.298	0.326478	0.337	0.1508	0.3271	0.4297	0.3569	0.33	0.17	0.31	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.822534	1.822534	NA	NA	NA	NA	0.333	NA	5.3296666
1119	3	195395354	195395354	A	G	ncRNA_intronic	SDHAP2	NA	NA	NA	ncRNA_intronic	ENSG00000215837,ENSG00000242086	NA	NA	NA	NA	NA	3q29	NA	Name=Pol2-4H8	NA	NA	rs80181010	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3372	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.002754	NA	NA	NA	NA	NA	0.014	NA	5.3294666
1119	8	95143138	95143138	A	G	exonic	CDH17	NA	synonymous SNV	CDH17:NM_001144663:exon16:c.T2250C:p.G750G,CDH17:NM_004063:exon16:c.T2250C:p.G750G	exonic	ENSG00000079112	NA	synonymous SNV	ENSG00000079112:ENST00000441892:exon12:c.T1608C:p.G536G,ENSG00000079112:ENST00000027335:exon16:c.T2250C:p.G750G,ENSG00000079112:ENST00000450165:exon16:c.T2250C:p.G750G	NA	NA	8q22.1	NA	NA	NA	NA	rs2513797	0.08	0.08	0.066	0.0836661	0.1153	NA	0.1009	0.1339	0.0573	0.1	NA	0.12	0.11	0.1	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.833994	NA	NA	0.121977	0.111666	NA	0.058	NA	5.3293896
1119	12	71065754	71065754	G	A	intronic	PTPRR	NA	NA	NA	ncRNA_exonic	ENSG00000257302	NA	NA	NA	Score=352;Name=lod=36	NA	12q15	NA	NA	NA	NA	rs140477906	0.0018	0.0018	0.002	0.000798722	0.004	NA	NA	NA	NA	0.01	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.086956	NA	NA	NA	NA	NA	0.007	NA	5.3293333
1119	19	10692117	10692117	T	C	intronic	AP1M2	NA	NA	NA	intronic	ENSG00000129354	NA	NA	NA	NA	NA	19p13.2	NA	Name=Pol2	Name=3	NA	rs2304161	0.36	0.36	0.294	0.372404	0.1779	0.6627	0.5115	0.2557	0.3323	0.17	0.67	0.45	0.24	0.2923	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.598499	NA	NA	0.200542	0.220755	ID=COSN165723;OCCURENCE=1(breast)	0.239	NA	5.329258
1119	19	1095334	1095334	G	A	UTR5	POLR2E	NM_002695:c.-20C>T	NA	NA	UTR5	ENSG00000099817	ENST00000586746:c.-20C>T,ENST00000215587:c.-20C>T,ENST00000591767:c.-20C>T,ENST00000589737:c.-20C>T	NA	NA	NA	NA	19p13.3	NA	Name=CCNT2,NFKB,HEY1,TBP,IRF1,Nrf1,ELK4,Sin3Ak-20,Pol2-4H8,YY1,E2F4,HMGN3,ETS1,TAF1,YY1_(C-20),SP1,Mxi1_(bHLH),Pol2,Pol2(phosphoS2)	NA	NA	rs371018866	NA	NA	NA	0.000599042	0.003	NA	NA	NA	NA	NA	NA	NA	NA	0.0004	0.0009	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.505641	1.505641	NA	0.000944	0	NA	NA	NA	5.3289894
1119	3	179689365	179689365	C	T	intronic	PEX5L	NA	NA	NA	intronic	ENSG00000114757	NA	NA	NA	Score=317;Name=lod=26	NA	3q26.33	NA	Name=MafK_(ab50322)	NA	NA	rs3774257	0.3	0.3	0.29	0.297724	0.2008	0.5268	0.281	0.2383	0.2536	0.2	0.52	0.25	0.23	0.2643	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.369993	3.369993	NA	0.206094	0.233999	NA	0.268	NA	5.328806
1119	6	90642358	90642358	G	A	exonic	BACH2	NA	synonymous SNV	BACH2:NM_001170794:exon7:c.C2295T:p.N765N,BACH2:NM_021813:exon9:c.C2295T:p.N765N	exonic	ENSG00000112182	NA	synonymous SNV	ENSG00000112182:ENST00000343122:exon7:c.C2295T:p.N765N,ENSG00000112182:ENST00000537989:exon7:c.C2295T:p.N765N,ENSG00000112182:ENST00000257749:exon9:c.C2295T:p.N765N	NA	NA	6q15	NA	NA	NA	NA	rs3798789	0.1	0.1	0.122	0.103435	0.1074	0.0704	0.0692	0.152	0.092	0.1	0.06	0.07	0.18	0.111	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.385634	NA	NA	0.119651	0.134589	NA	0.203	NA	5.3286156
1119	X	140993877	140993877	C	A	exonic	MAGEC1	NA	synonymous SNV	MAGEC1:NM_005462:exon4:c.C687A:p.A229A	exonic	ENSG00000155495	NA	synonymous SNV	ENSG00000155495:ENST00000285879:exon4:c.C687A:p.A229A	NA	NA	Xq27.2	NA	NA	NA	NA	rs176039	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3381	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.551401	NA	NA	NA	NA	NA	0.116	NA	5.3285666
1119	5	43496299	43496299	A	G	intronic	C5orf34	NA	NA	NA	ncRNA_exonic	ENSG00000249855	NA	NA	NA	Score=860;Name=lod=4171	NA	5p12	NA	NA	NA	NA	rs190278336	0.0018	0.0018	NA	0.00359425	0.005	NA	0.0029	0.0015	0.0092	0.004	NA	NA	0.002	NA	0.004	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.265142	NA	NA	NA	NA	NA	NA	NA	5.3283333
1119	19	10692129	10692129	G	A	intronic	AP1M2	NA	NA	NA	intronic	ENSG00000129354	NA	NA	NA	NA	NA	19p13.2	NA	Name=Pol2	Name=3	NA	rs2304160	0.36	0.36	0.3	0.372604	0.1779	0.6627	0.5115	0.2557	0.3333	0.17	0.67	0.45	0.24	0.2925	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.932681	NA	NA	0.201273	0.222821	ID=COSN165724;OCCURENCE=1(breast)	0.239	NA	5.328327
1119	17	10398028	10398028	C	T	intronic	MYH1	NA	NA	NA	ncRNA_intronic	ENSG00000214970	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	NA	NA	NA	NA	0.00239617	0.002	NA	0.0029	NA	0.0082	NA	NA	NA	NA	0.0032	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.028206	NA	NA	NA	NA	NA	NA	NA	5.3281333
1119	2	202671381	202671381	C	G	UTR5	CDK15	NM_001261436:c.-7C>G,NM_001261435:c.-7C>G	NA	NA	UTR5	ENSG00000138395	ENST00000450471:c.-7C>G,ENST00000434439:c.-7C>G	NA	NA	NA	NA	2q33.1	NA	Name=KAP1	Name=79	NA	rs2192672	0.37	0.37	0.382	0.403155	0.3211	0.4097	0.2176	0.5121	0.4652	0.33	0.4	0.21	0.5	0.3909	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.892807	1.892807	NA	0.293571	0.478261	NA	0.413	NA	5.3277624
1119	19	4325433	4325433	G	A	exonic	STAP2	NA	synonymous SNV	STAP2:NM_001013841:exon10:c.C939T:p.P313P,STAP2:NM_017720:exon10:c.C939T:p.P313P	exonic	ENSG00000178078	NA	synonymous SNV	ENSG00000178078:ENST00000594605:exon10:c.C939T:p.P313P,ENSG00000178078:ENST00000600324:exon10:c.C939T:p.P313P	Score=381;Name=lod=47	NA	19p13.3	NA	NA	NA	NA	rs1138253	0.52	0.52	0.502	0.519968	0.4294	0.6339	0.4957	0.5764	0.4366	0.41	0.65	0.48	0.58	0.4613	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.12241	NA	NA	0.448256	0.552882	NA	0.558	NA	5.3277106
1119	10	27629746	27629746	G	C	intergenic	LRRC37A6P,PTCHD3	dist=88511;dist=57371	NA	NA	ncRNA_exonic	ENSG00000215409	NA	NA	NA	Score=321;Name=lod=27	NA	10p12.1	NA	Name=USF-1	NA	NA	rs237596	0.7	0.7	0.694	0.716853	0.673	0.5635	0.7478	0.9281	0.6125	0.65	0.57	0.71	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.320707	NA	NA	NA	NA	NA	0.761	NA	5.327
1119	20	17595329	17595329	G	A	intronic	RRBP1	NA	NA	NA	intronic	ENSG00000125844	NA	NA	NA	NA	NA	20p12.1	NA	Name=Pol2,HA-E2F1,ZNF263	Name=68	NA	rs7261001	0.42	0.42	0.386	0.36881	0.673	0.255	0.5576	0.034	0.4918	0.68	0.26	0.6	0.06	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.630002	NA	NA	NA	NA	NA	0.457	NA	5.327
1119	11	116720021	116720021	G	C	intronic	SIK3	NA	NA	NA	ncRNA_intronic	ENSG00000235910	NA	NA	NA	Score=265;Name=lod=16	NA	11q23.3	NA	NA	NA	NA	rs113661446	0.02	0.02	0.013	0.01877	NA	NA	0.013	0.0643	NA	NA	NA	0.01	0.06	0.0063	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.71462	NA	NA	0.000349	0.069968	NA	0.036	NA	5.3266843
1119	17	56272390	56272390	A	G	exonic	EPX	NA	synonymous SNV	EPX:NM_000502:exon6:c.A660G:p.R220R	exonic	ENSG00000121053	NA	synonymous SNV	ENSG00000121053:ENST00000225371:exon6:c.A660G:p.R220R	NA	NA	17q22	Score=831;Name=V$GR_Q6	NA	NA	NA	rs2240815	0.46	0.46	0.47	0.501398	0.4354	0.244	0.2968	0.8495	0.5092	0.44	0.24	0.31	0.86	0.4639	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.672353	NA	NA	0.441279	0.778484	NA	0.464	NA	5.3260876
1119	13	111109618	111109618	G	C	intronic	COL4A2	NA	NA	NA	ncRNA_exonic	ENSG00000224821	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs9515216	0.48	0.48	0.48	NA	NA	NA	NA	NA	NA	0.57	0.23	0.54	0.61	0.0074	0.61	0.4	T	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.935	T	0.000	T	0.043	-1.06	0.183	-1.23	-0.703	0.030	5.772	-1.060077	NA	0	NA	NA	NA	NA	NA	5.3259333
1119	19	20959119	20959119	T	G	intergenic	ZNF626,ZNF85	dist=114717;dist=146940	NA	NA	UTR5	ENSG00000160229	ENST00000360204:c.-16262T>G,ENST00000594534:c.-135T>G	NA	NA	NA	NA	19p12	NA	Name=IRF3,NFKB,HEY1,TBP,RFX5_(N-494),GATA-2,Pol2-4H8,c-Fos,Sin3Ak-20,ELF1_(SC-631),NF-YB,CHD2_(N-1250),NF-YA,SP2_(SC-643),TAF1,GABP,Pol2,SP1,GATA3_(SC-268),TAF7_(SQ-8)	Name=140	NA	rs8106412	0.53	0.53	0.481	0.526957	0.508	0.5704	0.4582	0.5287	0.5481	0.53	0.59	0.48	0.5	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.049247	NA	NA	NA	NA	NA	0.478	NA	5.3253334
1119	3	52830764	52830764	C	T	exonic	ITIH3	NA	synonymous SNV	ITIH3:NM_002217:exon4:c.C291T:p.D97D	exonic	ENSG00000162267	NA	synonymous SNV	ENSG00000162267:ENST00000416872:exon4:c.C291T:p.D97D,ENSG00000162267:ENST00000449956:exon4:c.C291T:p.D97D	NA	NA	3p21.1	NA	NA	NA	NA	rs2240921	0.14	0.14	0.149	0.16873	0.1044	0.0407	0.1427	0.3631	0.1227	0.11	0.03	0.17	0.29	0.1246	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.557726	NA	NA	0.112456	0.259883	ID=COSM149402;OCCURENCE=1(stomach)	0.268	NA	5.3252106
1120	19	41812506	41812506	G	A	UTR3	HNRNPUL1	NM_144732:c.*36G>A,NM_007040:c.*36G>A	NA	NA	UTR3	ENSG00000105323	ENST00000352456:c.*36G>A,ENST00000595018:c.*36G>A,ENST00000392006:c.*36G>A,ENST00000378215:c.*36G>A,ENST00000595196:c.*2183G>A,ENST00000602130:c.*36G>A,ENST00000593587:c.*36G>A,ENST00000263367:c.*36G>A,ENST00000599614:c.*36G>A	NA	NA	Score=407;Name=lod=60	NA	19q13.2	NA	NA	NA	NA	rs200198044	0.0009	0.0009	NA	0.000798722	0.003	NA	NA	NA	0.001	0.0026	NA	NA	NA	0.0029	0.0027	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.917091	3.917091	NA	0.00273	0.000694	NA	NA	NA	5.3247034
1120	9	127566378	127566378	A	G	exonic	OLFML2A	NA	nonsynonymous SNV	OLFML2A:NM_182487:exon6:c.A925G:p.T309A	exonic	ENSG00000185585	NA	nonsynonymous SNV	ENSG00000185585:ENST00000288815:exon3:c.A283G:p.T95A,ENSG00000185585:ENST00000331715:exon5:c.A817G:p.T273A,ENSG00000185585:ENST00000373580:exon6:c.A925G:p.T309A	NA	NA	9q33.3	NA	NA	NA	NA	rs7874348	0.78	0.78	0.758	0.819888	0.6183	0.8968	0.7968	0.8775	0.8865	0.62	0.89	0.79	0.87	0.731	0.89	0.79	T	0.0	B	0.002	B	0.130	N	1.000	P	-0.145	N	0.89	T	-0.997	T	0.000	T	0.017	-0.784	0.719	0.46	0.015	-0.506	7.665	-0.78442	NA	0.65	0.659419	0.862006	NA	0.783	NA	5.3246144
1120	16	89865332	89865332	C	T	UTR3	FANCA	NM_001018112:c.*155G>A	NA	NA	UTR3	ENSG00000187741	ENST00000389302:c.*155G>A,ENST00000563673:c.*184G>A,ENST00000534992:c.*134G>A,ENST00000543736:c.*155G>A	NA	NA	NA	NA	16q24.3	NA	NA	Name=16	NA	rs45446001	0.0046	0.0046	0.002	0.00638978	0.0089	NA	0.0072	0.0008	0.0174	0.01	NA	0.01	0.002	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.029674	NA	NA	NA	NA	NA	NA	NA	5.3244334
1120	7	23851086	23851086	T	C	intronic	STK31	NA	NA	NA	ncRNA_exonic	ENSG00000231328	NA	NA	NA	Score=235;Name=lod=12	NA	7p15.3	NA	NA	NA	NA	rs140141019	0.0032	0.0032	0.001	0.00359425	0.0089	NA	0.0029	NA	0.0072	0.01	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.064348	NA	NA	NA	NA	NA	NA	NA	5.3244333
1120	16	15083120	15083120	G	A	intronic	PDXDC1	NA	NA	NA	ncRNA_exonic	ENSG00000261819	NA	NA	NA	Score=538;Name=lod=205	NA	16p13.11	NA	NA	NA	NA	rs199901079	NA	NA	NA	0.00199681	0.0089	NA	NA	NA	0.001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.083419	2.083419	0.14	NA	NA	NA	NA	NA	5.3244333
1120	19	44612005	44612005	A	G	exonic	ZNF224	NA	synonymous SNV	ZNF224:NM_013398:exon6:c.A1692G:p.G564G	exonic	ENSG00000267680	NA	synonymous SNV	ENSG00000267680:ENST00000336976:exon6:c.A1692G:p.G564G	Score=363;Name=lod=40	NA	19q13.31	NA	Name=SETDB1	NA	NA	rs3746321	0.62	0.62	0.591	0.584864	0.8131	0.5357	0.5144	0.4085	0.6892	0.8	0.54	0.59	0.44	0.7105	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.217853	2.217853	NA	0.818721	0.455515	NA	0.674	NA	5.3243456
1120	18	11609904	11609904	A	G	intergenic	PIEZO2,GNAL	dist=461143;dist=79110	NA	NA	ncRNA_exonic	ENSG00000236396	NA	NA	NA	Score=536;Name=lod=202	NA	18p11.21	NA	NA	NA	NA	rs8087447	0.76	0.76	0.84	0.889776	0.8221	0.8968	0.8818	0.9327	0.8998	0.68	0.81	0.8	0.82	0.8537	0.82	0.33	T	.	.	.	.	.	.	1.000	P	-0.695	N	.	.	-1.000	T	0.000	T	.	-1.681	0.012	.	-1.986	-3.105	.	-1.681013	NA	NA	NA	NA	NA	0.058	NA	5.3242
1120	1	205035455	205035455	A	G	intronic	CNTN2	NA	NA	NA	intronic	ENSG00000184144	NA	NA	NA	NA	NA	1q32.1	NA	Name=CTCF,Rad21,CTCF_(SC-5916)	Name=9	NA	rs16937	0.58	0.58	0.56	0.582867	0.6759	0.5774	0.6196	0.4501	0.6462	0.68	0.56	0.6	0.46	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.97038	NA	NA	NA	NA	NA	0.623	NA	5.3241
1120	19	44098903	44098903	T	A	intronic	IRGQ	NA	NA	NA	intronic	ENSG00000167378	NA	NA	NA	NA	NA	19q13.31	NA	Name=ZEB1_(SC-25388),CTCF_(C-20),CTCF_(SC-5916),RFX5_(N-494),ELF1_(SC-631),Rad21,CTCF,TAF1,SMC3_(ab9263),YY1_(C-20),BCLAF1_(M33-P5B11)	Name=137	NA	rs304726	0.7	0.7	0.708	0.6877	0.6759	0.6171	0.7709	0.7693	0.6033	0.67	0.62	0.77	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.28016	NA	NA	NA	NA	NA	0.725	NA	5.3241
1120	5	179529124	179529124	G	A	exonic	RASGEF1C	NA	synonymous SNV	RASGEF1C:NM_175062:exon13:c.C1323T:p.Y441Y	exonic	ENSG00000146090	NA	synonymous SNV	ENSG00000146090:ENST00000522500:exon10:c.C870T:p.Y290Y,ENSG00000146090:ENST00000393371:exon12:c.C1323T:p.Y441Y,ENSG00000146090:ENST00000361132:exon13:c.C1323T:p.Y441Y	Score=593;Name=lod=342	NA	5q35.3	Score=824;Name=V$IRF2_01	NA	NA	NA	rs7725201	0.78	0.78	0.795	0.826078	0.7684	0.7966	0.7882	0.8139	0.9591	0.77	0.76	0.76	0.82	0.7945	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.548944	NA	NA	0.779767	0.794825	NA	0.804	NA	5.3239996
1120	10	90984990	90984990	G	A	intronic	LIPA	NA	NA	NA	intronic	ENSG00000107798	NA	NA	NA	NA	NA	10q23.31	NA	Name=CTCF	Name=41	NA	rs2297472	0.35	0.35	0.309	0.31889	0.2018	0.7004	0.3674	0.0976	0.3108	0.22	0.74	0.32	0.1	0.2781	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.628426	NA	NA	0.196163	0.104176	NA	0.203	NA	5.323937
1120	5	112770027	112770027	T	G	exonic	TSSK1B	NA	synonymous SNV	TSSK1B:NM_032028:exon1:c.A510C:p.A170A	exonic	ENSG00000212122	NA	synonymous SNV	ENSG00000212122:ENST00000390666:exon1:c.A510C:p.A170A	NA	NA	5q22.2	NA	NA	NA	NA	rs26980	0.07	0.07	0.061	0.0513179	0.1243	0.0288	0.0317	0.0204	0.0552	0.14	0.04	0.02	0.03	0.0997	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.105182	NA	NA	0.118837	0.034514	NA	0.138	NA	5.3238296
1120	3	72821690	72821690	C	G	intronic	SHQ1	NA	NA	NA	ncRNA_exonic	ENSG00000241537	NA	NA	NA	Score=615;Name=lod=423	NA	3p13	NA	NA	NA	NA	rs148652264	0.01	0.01	0.005	0.00499201	0.0099	NA	0.0115	NA	0.0072	0.01	NA	0.02	NA	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.079881	NA	NA	NA	NA	NA	0.029	NA	5.3234333
1120	22	42524795	42524795	A	G	exonic	CYP2D6	NA	synonymous SNV	CYP2D6:NM_001025161:exon3:c.T504C:p.F168F,CYP2D6:NM_000106:exon4:c.T657C:p.F219F	exonic	ENSG00000100197	NA	synonymous SNV	ENSG00000100197:ENST00000360124:exon2:c.T324C:p.F108F,ENSG00000100197:ENST00000359033:exon3:c.T504C:p.F168F,ENSG00000100197:ENST00000360608:exon4:c.T657C:p.F219F,ENSG00000100197:ENST00000389970:exon5:c.T657C:p.F219F	NA	NA	22q13.2	NA	NA	NA	NA	rs28371713	NA	NA	0.154	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3434	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000268	NA	NA	NA	NA	ID=COSM1632628,COSM1632629;OCCURENCE=1(liver)	NA	NA	5.3232666
1120	19	10738639	10738639	C	T	exonic	SLC44A2	NA	synonymous SNV	SLC44A2:NM_001145056:exon4:c.C198T:p.D66D,SLC44A2:NM_020428:exon4:c.C204T:p.D68D	exonic	ENSG00000129353	NA	synonymous SNV	ENSG00000129353:ENST00000335757:exon4:c.C204T:p.D68D,ENSG00000129353:ENST00000407327:exon4:c.C198T:p.D66D,ENSG00000129353:ENST00000586078:exon4:c.C204T:p.D68D,ENSG00000129353:ENST00000588409:exon4:c.C204T:p.D68D	Score=369;Name=lod=42	NA	19p13.2	Score=742;Name=V$SEF1_C	NA	NA	NA	rs3087969	0.76	0.76	0.765	0.786542	0.7644	0.7103	0.8415	0.8593	0.7505	0.77	0.65	0.81	0.86	0.7932	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.841027	NA	NA	0.785814	0.84158	NA	0.768	NA	5.3232526
1120	12	89917037	89917037	G	A	exonic	GALNT4,POC1B-GALNT4	NA	synonymous SNV	GALNT4:NM_003774:exon1:c.C1290T:p.N430N,POC1B-GALNT4:NM_001199781:exon3:c.C1281T:p.N427N,POC1B-GALNT4:NM_001199782:exon3:c.C774T:p.N258N	exonic	ENSG00000257594,ENSG00000259075	NA	synonymous SNV	ENSG00000257594:ENST00000529983:exon1:c.C1290T:p.N430N,ENSG00000259075:ENST00000413530:exon3:c.C774T:p.N258N,ENSG00000259075:ENST00000548729:exon3:c.C1281T:p.N427N	NA	NA	12q21.33	NA	NA	NA	NA	rs2230282	0.07	0.07	0.057	0.0714856	0.1282	0.0228	0.0821	0.0408	0.0971	0.13	0.01	0.09	0.02	0.1027	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.363365	NA	NA	0.112793	0.046196	NA	0.072	NA	5.3229736
1120	17	39261949	39261949	T	C	exonic	KRTAP4-9	NA	synonymous SNV	KRTAP4-9:NM_001146041:exon1:c.T309C:p.T103T	exonic	ENSG00000212722	NA	synonymous SNV	ENSG00000212722:ENST00000391415:exon1:c.T309C:p.T103T	NA	NA	17q21.2	NA	NA	Name=3	NA	rs7212474	NA	NA	0.641	0.664736	0.6869	0.4038	0.6441	0.9486	0.5419	NA	NA	NA	NA	0.6569	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.636117	NA	NA	NA	NA	NA	NA	NA	5.3228666
1120	3	45636335	45636335	A	G	UTR5	LIMD1	NM_014240:c.-37A>G	NA	NA	UTR5	ENSG00000144791	ENST00000440097:c.-37A>G	NA	NA	NA	NA	3p21.31	NA	Name=ZEB1_(SC-25388),GABP	Name=8	NA	rs267238	0.52	0.52	0.418	0.508786	0.502	0.6538	0.5591	0.2799	0.6401	0.5	0.69	0.58	0.3	0.0032	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.187953	NA	NA	0.505814	0.30654	NA	0.167	NA	5.3223194
1120	20	33581955	33581955	G	A	exonic	MYH7B	NA	synonymous SNV	MYH7B:NM_020884:exon27:c.G2577A:p.A859A	exonic	ENSG00000078814	NA	synonymous SNV	ENSG00000078814:ENST00000262873:exon25:c.G2577A:p.A859A	Score=538;Name=lod=204	NA	20q11.22	NA	NA	NA	NA	rs2425012	0.44	0.44	0.417	0.396765	0.4861	0.5546	0.621	0.171	0.2883	0.47	0.56	0.55	0.17	0.4325	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.469957	NA	NA	0.425835	0.216737	NA	0.283	NA	5.3222316
1120	7	48313949	48313949	C	T	exonic	ABCA13	NA	synonymous SNV	ABCA13:NM_152701:exon17:c.C4686T:p.Y1562Y	exonic	ENSG00000179869	NA	synonymous SNV	ENSG00000179869:ENST00000435803:exon17:c.C4686T:p.Y1562Y	NA	NA	7p12.3	NA	NA	NA	NA	rs6583483	0.13	0.13	0.11	0.126597	0.1074	0.1518	0.17	0.0522	0.1902	0.11	0.18	0.16	0.06	0.1287	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.454894	NA	NA	0.108813	0.060867	NA	0.109	NA	5.3217536
1120	14	76662370	76662370	T	C	intronic	GPATCH2L	NA	NA	NA	exonic	ENSG00000089916	NA	synonymous SNV	ENSG00000089916:ENST00000553588:exon2:c.T205C:p.L69L	NA	NA	14q24.3	NA	NA	Name=2	NA	rs17104243	0.21	0.21	0.201	0.208067	0.16	0.1012	0.2334	0.3949	0.0971	0.17	0.1	0.19	0.4	0.1905	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.00303	NA	NA	0.161534	0.367775	NA	0.196	NA	5.3212993
1120	19	10694239	10694239	A	G	intronic	AP1M2	NA	NA	NA	intronic	ENSG00000129354	NA	NA	NA	NA	NA	19p13.2	NA	Name=NF-YA,Pbx3	Name=15	NA	rs11085739	0.37	0.37	0.303	0.373003	0.1789	0.6627	0.5115	0.2557	0.3344	0.17	0.67	0.45	0.24	0.2944	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.016737	NA	NA	0.205456	0.22055	NA	0.239	NA	5.321244
1120	19	10694244	10694244	C	T	intronic	AP1M2	NA	NA	NA	intronic	ENSG00000129354	NA	NA	NA	NA	NA	19p13.2	NA	Name=Pbx3,NF-YA	Name=15	NA	rs11085740	0.37	0.37	0.32	0.373003	0.1789	0.6627	0.5115	0.2557	0.3344	0.17	0.67	0.45	0.24	0.2947	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.41532	NA	NA	0.205428	0.225	NA	0.239	NA	5.320972
1120	1	201489286	201489286	C	G	ncRNA_exonic	RPS10P7	NA	NA	NA	ncRNA_exonic	ENSG00000223396,ENSG00000242150	NA	NA	NA	Score=746;Name=lod=1439	NA	1q32.1	NA	NA	NA	NA	rs4310467	0.2	0.2	0.177	0.14976	0.3459	0.0873	0.1916	0.034	0.1391	0.36	0.08	0.25	0.03	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.43257	NA	NA	NA	NA	NA	0.275	NA	5.3207666
1120	3	195426148	195426148	T	C	upstream	MIR570	NA	NA	NA	ncRNA_intronic	ENSG00000242086	NA	NA	NA	NA	NA	3q29	NA	Name=eGFP-JunD	Name=31	NA	rs4997079	0.62	0.62	0.54	0.763778	0.8459	0.6716	0.6873	0.8608	0.6973	0.71	0.49	0.59	0.66	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.582161	NA	NA	NA	NA	NA	0.007	NA	5.3207666
1120	19	15882884	15882884	C	T	ncRNA_exonic	CYP4F24P	NA	NA	NA	ncRNA_exonic	ENSG00000267594	NA	NA	NA	Score=545;Name=lod=219	NA	19p13.12	NA	NA	NA	NA	rs3752144	0.14	0.14	0.107	0.15655	0.164	0.122	0.1095	0.1513	0.2249	0.16	0.13	0.09	0.14	0.182	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.79749	NA	NA	NA	NA	NA	0.181	NA	5.3206666
1120	8	22863299	22863299	C	T	intronic	RHOBTB2	NA	NA	NA	ncRNA_intronic	ENSG00000245025	NA	NA	NA	Score=272;Name=lod=17	NA	8p21.3	NA	NA	NA	NA	rs117230144	0.02	0.02	0.011	0.01877	0.0129	NA	0.1095	0.0015	0.0031	0.02	NA	0.1	0.0041	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.862174	1.862174	NA	NA	NA	NA	NA	NA	5.3204333
1120	19	15881909	15881909	A	G	ncRNA_exonic	CYP4F24P	NA	NA	NA	ncRNA_exonic	ENSG00000267594	NA	NA	NA	Score=363;Name=lod=40	NA	19p13.12	NA	NA	NA	NA	rs4807985	0.15	0.15	0.134	0.15655	0.164	0.122	0.1095	0.152	0.2239	0.16	0.14	0.1	0.16	0.1823	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.348448	NA	NA	NA	NA	NA	0.181	NA	5.3203666
1120	X	52891653	52891653	C	T	exonic	XAGE3	NA	synonymous SNV	XAGE3:NM_130776:exon5:c.G330A:p.Q110Q,XAGE3:NM_133179:exon5:c.G330A:p.Q110Q	exonic	ENSG00000171402	NA	synonymous SNV	ENSG00000171402:ENST00000346279:exon5:c.G330A:p.Q110Q,ENSG00000171402:ENST00000375491:exon5:c.G330A:p.Q110Q	NA	NA	Xp11.22	NA	NA	NA	NA	rs73206488	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3463	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.175087	NA	NA	NA	NA	ID=COSM287951;OCCURENCE=1(large_intestine)	0.014	NA	5.3203666
1120	17	48017030	48017030	T	C	intergenic	FLJ45513,DLX4	dist=90831;dist=29532	NA	NA	ncRNA_exonic	ENSG00000249176	NA	NA	NA	Score=633;Name=lod=499	NA	17q21.33	NA	Name=HNF4A,HNF4G_(SC-6558)	NA	NA	rs271659	0.52	0.52	0.532	0.506589	0.6799	0.247	0.4164	0.6354	0.4857	0.69	0.28	0.49	0.59	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.743714	NA	NA	NA	NA	ID=COSN165460;OCCURENCE=1(NS)	0.558	NA	5.3201
1120	17	25753502	25753502	C	T	ncRNA_exonic	TBC1D3P5	NA	NA	NA	ncRNA_exonic	ENSG00000266433	NA	NA	NA	Score=536;Name=lod=202	NA	17q11.1	NA	NA	NA	NA	rs35094692	0.32	0.32	0.301	0.321286	0.3469	0.3145	0.4078	0.2171	0.3814	0.34	0.31	0.42	0.22	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.317182	NA	NA	NA	NA	NA	0.254	NA	5.3197666
1120	7	36455477	36455477	T	C	exonic	ANLN	NA	synonymous SNV	ANLN:NM_018685:exon8:c.T1506C:p.S502S	exonic	ENSG00000011426	NA	synonymous SNV	ENSG00000011426:ENST00000265748:exon8:c.T1506C:p.S502S,ENSG00000011426:ENST00000396068:exon8:c.T1506C:p.S502S	NA	NA	7p14.2	NA	NA	NA	NA	rs10224902	0.12	0.12	0.108	0.132788	0.1004	0.1895	0.1729	0.0915	0.135	0.11	0.17	0.14	0.09	0.131	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.216166	NA	NA	0.115581	0.103495	NA	0.167	NA	5.3196856
1120	21	47685939	47685939	A	G	exonic	MCM3AP	NA	synonymous SNV	MCM3AP:NM_003906:exon11:c.T2931C:p.H977H	exonic	ENSG00000160294	NA	synonymous SNV	ENSG00000160294:ENST00000291688:exon11:c.T2931C:p.H977H,ENSG00000160294:ENST00000397708:exon12:c.T2931C:p.H977H	NA	NA	21q22.3	Score=916;Name=V$AREB6_01	NA	NA	NA	rs2839181	0.41	0.41	0.385	0.421725	0.4344	0.2788	0.5274	0.4879	0.3916	0.43	0.26	0.52	0.47	0.4515	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.11953	NA	NA	0.461279	0.498865	ID=COSM444627;OCCURENCE=1(breast)	0.304	NA	5.3194876
1120	20	1301000	1301000	G	A	ncRNA_intronic	FKBP1A-SDCBP2	NA	NA	NA	intronic	ENSG00000125775	NA	NA	NA	NA	NA	20p13	Score=924;Name=V$AREB6_01	NA	NA	NA	rs138479611	0.0032	0.0032	0.003	0.00139776	0.005	0.001	0.0014	NA	NA	0.01	NA	0.01	NA	0.0038	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.368469	NA	NA	0.005096	0.000523	NA	NA	NA	5.3194373
1120	1	160580445	160580445	C	T	UTR3	SLAMF1	NM_003037:c.*93G>A	NA	NA	UTR3	ENSG00000117090	ENST00000302035:c.*93G>A,ENST00000235739:c.*93G>A	NA	NA	NA	NA	1q23.3	NA	Name=Pol2-4H8	NA	NA	rs41266921	0.01	0.01	0.006	0.0123802	0.0139	0.0228	0.0072	NA	0.0204	0.01	0.02	0.01	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.316724	NA	NA	NA	NA	NA	NA	NA	5.3194334
1120	17	76154288	76154288	G	A	intronic	C17orf99	NA	NA	NA	ncRNA_intronic	ENSG00000267679	NA	NA	NA	Score=521;Name=lod=175	NA	17q25.3	NA	NA	NA	NA	rs140259041	0.01	0.01	0.009	0.00638978	0.0139	NA	0.013	0.0008	0.0082	0.01	NA	0.02	0.002	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.470703	1.470703	NA	NA	NA	NA	0.007	NA	5.3194333
1120	10	5762740	5762740	A	G	intronic	FAM208B	NA	NA	NA	ncRNA_intronic	ENSG00000226647	NA	NA	NA	Score=371;Name=lod=43	NA	10p15.1	NA	NA	NA	NA	rs200240206	0.0009	0.0009	NA	0.00299521	0.006	NA	0.0014	NA	0.0082	0.0026	NA	NA	NA	0.0037	0.0047	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.063567	NA	NA	0.004665	0.001382	NA	NA	NA	5.3189683
1120	4	25370627	25370627	A	G	intronic	ZCCHC4	NA	NA	NA	intronic	ENSG00000168228	NA	NA	NA	Score=571;Name=lod=278	NA	4p15.2	Score=793;Name=V$POU3F2_01	NA	NA	NA	rs315690	0.31	0.31	0.328	0.323882	0.2187	0.2847	0.2421	0.5378	0.2413	0.22	0.28	0.25	0.5	0.2454	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.687474	3.687474	NA	0.2172	0.485286	NA	0.21	NA	5.3187
1120	12	102559708	102559708	A	C	intronic	PARPBP	NA	NA	NA	intronic	ENSG00000185480	NA	NA	NA	Score=265;Name=lod=16	NA	12q23.2	Score=892;Name=V$TATA_C	NA	NA	NA	rs3794201	0.28	0.28	0.286	0.25619	0.2157	0.4196	0.2464	0.2141	0.1933	0.22	0.45	0.22	0.25	0.2471	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.488662	1.488662	NA	0.218662	0.224661	NA	0.159	NA	5.318538
1120	3	134670524	134670524	C	T	exonic	EPHB1	NA	synonymous SNV	EPHB1:NM_004441:exon3:c.C435T:p.S145S	exonic	ENSG00000154928	NA	synonymous SNV	ENSG00000154928:ENST00000398015:exon3:c.C435T:p.S145S,ENSG00000154928:ENST00000474732:exon3:c.C369T:p.S123S,ENSG00000154928:ENST00000482618:exon3:c.C435T:p.S145S	Score=762;Name=lod=1672	NA	3q22.2	NA	NA	NA	NA	rs7644369	0.43	0.43	0.408	0.48143	0.4394	0.2123	0.5692	0.6377	0.5286	0.44	0.15	0.59	0.63	0.4628	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.695007	NA	NA	0.446518	0.575873	NA	0.529	NA	5.3179486
1120	19	8399272	8399272	G	A	exonic	KANK3	NA	synonymous SNV	KANK3:NM_198471:exon4:c.C1359T:p.D453D	exonic	ENSG00000186994	NA	synonymous SNV	ENSG00000186994:ENST00000595639:exon3:c.C66T:p.D22D,ENSG00000186994:ENST00000330915:exon4:c.C1359T:p.D453D,ENSG00000186994:ENST00000593649:exon4:c.C1359T:p.D453D	NA	NA	19p13.2	NA	NA	NA	NA	rs8106699	0.12	0.12	0.115	0.129792	0.1153	0.0327	0.1239	0.2413	0.0982	0.11	0.03	0.14	0.23	0.1204	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.205614	NA	NA	0.11305	0.209487	NA	0.13	NA	5.3179166
1120	1	23954528	23954528	T	C	ncRNA_intronic	MDS2	NA	NA	NA	intronic	ENSG00000197880	NA	NA	NA	NA	NA	1p36.11	NA	Name=CEBPB	NA	NA	rs2683058	0.14	0.14	NA	NA	NA	NA	NA	NA	NA	0.19	0.04	0.1	0.22	0.0155	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.193832	NA	NA	NA	NA	NA	0.174	NA	5.3178333
1120	12	46298877	46298877	A	C	UTR3	ARID2	NM_152641:c.*16A>C	NA	NA	UTR3	ENSG00000189079	ENST00000334344:c.*16A>C,ENST00000444670:c.*16A>C,ENST00000457135:c.*199A>C	NA	NA	Score=764;Name=lod=1696	NA	12q12	NA	NA	NA	NA	rs183623382	0.0032	0.0032	NA	0.00259585	0.008	NA	0.0029	0.0008	0.002	0.01	NA	NA	NA	0.0034	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.285656	NA	NA	0.004186	0.000681	NA	NA	NA	5.3177474
1120	13	100803321	100803321	A	G	intronic	PCCA	NA	NA	NA	ncRNA_exonic	ENSG00000228501	NA	NA	NA	Score=784;Name=lod=2042	NA	13q32.3	NA	NA	NA	NA	rs150333900	0.01	0.01	0.01	0.00878594	0.0159	0.001	0.0245	0.0008	0.0092	0.01	NA	0.03	NA	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.783093	NA	NA	NA	NA	NA	0.014	NA	5.3174333
1120	9	35079361	35079361	G	T	intronic	FANCG	NA	NA	NA	intronic	ENSG00000221829	NA	NA	NA	NA	NA	9p13.3	NA	Name=ZNF263	Name=12	NA	rs504082	0.43	0.43	0.374	0.407548	0.6829	0.0804	0.7032	0.2103	0.5184	0.69	0.09	0.69	0.23	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.675701	NA	NA	NA	NA	NA	0.471	NA	5.3171
1120	1	94344716	94344716	C	T	UTR5	DNTTIP2	NM_014597:c.-12G>A	NA	NA	UTR5	ENSG00000067334	ENST00000436063:c.-12G>A,ENST00000359208:c.-12G>A,ENST00000528680:c.-12G>A	NA	NA	NA	NA	1p22.1	NA	Name=E2F6_(H-50),ETS1,Pol2(b),TAF1,ZBTB33,GABP,ELK4,TCF4,YY1,STAT3,NRSF,ATF3,PU.1,Mxi1_(bHLH),Pol2,Pol2-4H8,E2F6,MEF2A,GATA3_(SC-268),Sin3Ak-20,BRCA1_(C-1863),YY1_(C-20),HA-E2F1,NFKB,HEY1,ZEB1_(SC-25388),AP-2gamma,ELF1_(SC-631),c-Myc,CCNT2,Max,ZBTB7A_(SC-34508),SIX5,GRp20,SRF,Nrf1,GTF2B,CHD2_(N-1250),GTF2F1_(RAP-74),IRF1,TBP	Name=147	NA	rs2235971	0.34	0.34	0.308	0.348243	0.325	0.5565	0.3329	0.093	0.5133	0.33	0.57	0.34	0.1	0.3577	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.5975	1.5975	NA	0.333777	0.145478	NA	0.391	NA	5.3168564
1120	17	60918602	60918602	T	A	ncRNA_intronic	MIR548W	NA	NA	NA	ncRNA_exonic	ENSG00000264907	NA	NA	NA	Score=543;Name=lod=215	NA	17q23.2	NA	NA	NA	NA	rs12943672	0.39	0.39	0.396	0.38738	0.3499	0.3492	0.3703	0.5008	0.3241	0.37	0.36	0.36	0.48	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.29367	NA	NA	NA	NA	NA	0.377	NA	5.3167666
1120	8	124658210	124658210	C	T	exonic	KLHL38	NA	synonymous SNV	KLHL38:NM_001081675:exon3:c.G1515A:p.A505A	exonic	ENSG00000175946	NA	synonymous SNV	ENSG00000175946:ENST00000325995:exon3:c.G1515A:p.A505A	NA	NA	8q24.13	NA	NA	NA	NA	rs16898671	0.14	0.14	0.149	0.160743	0.1014	0.1637	0.0821	0.2133	0.2035	0.11	0.18	0.07	0.2	0.1305	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.691382	NA	NA	0.118203	0.191774	NA	0.188	NA	5.3165636
1120	20	50405502	50405502	C	G	exonic	SALL4	NA	synonymous SNV	SALL4:NM_020436:exon3:c.G2640C:p.S880S	exonic	ENSG00000101115	NA	synonymous SNV	ENSG00000101115:ENST00000371539:exon2:c.G309C:p.S103S,ENSG00000101115:ENST00000217086:exon3:c.G2640C:p.S880S,ENSG00000101115:ENST00000395997:exon3:c.G1329C:p.S443S	NA	NA	20q13.2	NA	NA	NA	NA	rs17802735	0.06	0.06	0.055	0.0497204	0.1272	0.001	0.0735	0.003	0.0665	0.13	0.0017	0.08	0.002	0.0897	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.434363	NA	NA	0.133256	0.028143	NA	0.007	NA	5.3165106
1120	2	70162534	70162534	T	G	exonic	MXD1	NA	synonymous SNV	MXD1:NM_001202514:exon3:c.T225G:p.L75L,MXD1:NM_001202513:exon4:c.T255G:p.L85L,MXD1:NM_002357:exon4:c.T255G:p.L85L	exonic	ENSG00000059728	NA	synonymous SNV	ENSG00000059728:ENST00000409442:exon3:c.T129G:p.L43L,ENSG00000059728:ENST00000540449:exon3:c.T225G:p.L75L,ENSG00000059728:ENST00000264444:exon4:c.T255G:p.L85L,ENSG00000059728:ENST00000435990:exon6:c.T159G:p.L53L	Score=467;Name=lod=105	NA	2p13.3	NA	NA	NA	NA	rs2228183	0.55	0.55	0.578	0.583866	0.4443	0.5407	0.4035	0.8502	0.5399	0.44	0.54	0.39	0.84	0.4799	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.376306	1.376306	NA	0.426628	0.78325	NA	0.565	NA	5.3158386
1120	22	47087670	47087670	G	A	exonic	CERK	NA	synonymous SNV	CERK:NM_022766:exon11:c.C1131T:p.D377D	exonic	ENSG00000100422	NA	synonymous SNV	ENSG00000100422:ENST00000541677:exon10:c.C537T:p.D179D,ENSG00000100422:ENST00000216264:exon11:c.C1131T:p.D377D	NA	NA	22q13.31	NA	NA	NA	NA	rs36211083	0.1	0.1	0.08	0.10024	0.1123	0.001	0.2003	0.1263	0.0838	0.12	0.0017	0.22	0.1	0.1186	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.247825	NA	NA	0.120116	0.124603	NA	0.094	NA	5.3156506
1120	13	42500924	42500924	C	T	intronic	VWA8	NA	NA	NA	ncRNA_exonic	ENSG00000229696	NA	NA	NA	Score=714;Name=lod=1060	NA	13q14.11	NA	NA	NA	NA	rs75477528	0.01	0.01	0.009	0.0145767	0.0179	0.004	0.0101	0.0083	0.0337	0.02	0.0017	0.01	0.01	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.425362	NA	NA	NA	NA	NA	0.007	NA	5.3154333
1120	1	160854526	160854526	G	A	intronic	ITLN1	NA	NA	NA	intronic	ENSG00000179914	NA	NA	NA	NA	NA	1q23.3	NA	Name=SMC3_(ab9263),JunD,CTCF,Rad21,ELF1_(SC-631)	Name=16	NA	rs2297559	0.68	0.68	0.668	0.669728	0.6849	0.7371	0.7277	0.5492	0.7065	0.68	0.75	0.71	0.58	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.068345	NA	NA	NA	NA	NA	0.667	NA	5.3151
1120	3	195477791	195477791	G	A	exonic	MUC4	NA	synonymous SNV	MUC4:NM_138297:exon21:c.C2979T:p.I993I,MUC4:NM_004532:exon22:c.C3132T:p.I1044I,MUC4:NM_018406:exon23:c.C15840T:p.I5280I	exonic	ENSG00000145113	NA	synonymous SNV	ENSG00000145113:ENST00000349607:exon21:c.C2979T:p.I993I,ENSG00000145113:ENST00000346145:exon22:c.C3132T:p.I1044I,ENSG00000145113:ENST00000475231:exon22:c.C15684T:p.I5228I,ENSG00000145113:ENST00000463781:exon23:c.C15840T:p.I5280I	NA	NA	3q29	Score=958;Name=V$GATA1_01	NA	NA	NA	rs2291652	0.43	0.43	0.382	0.40615	0.4583	0.7679	0.4179	0.0787	0.4141	0.45	0.72	0.4	0.09	0.4432	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.159908	NA	NA	0.450116	0.149342	NA	0.304	NA	5.3150506
1121	8	143996553	143996553	G	A	exonic	CYP11B2	NA	synonymous SNV	CYP11B2:NM_000498:exon3:c.C504T:p.F168F	exonic	ENSG00000179142	NA	synonymous SNV	ENSG00000179142:ENST00000323110:exon3:c.C504T:p.F168F	Score=321;Name=lod=27	NA	8q24.3	NA	NA	NA	NA	rs4546	0.36	0.36	0.298	0.345447	0.4841	0.2867	0.4697	0.1838	0.3937	0.48	0.31	0.43	0.17	0.4189	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.939874	NA	NA	0.449162	0.231729	ID=COSM1569160;OCCURENCE=1(large_intestine)	NA	NA	5.3145046
1121	17	55197764	55197764	A	C	UTR3	AKAP1	NM_003488:c.*79A>C,NM_001242903:c.*79A>C,NM_001242902:c.*79A>C	NA	NA	UTR3	ENSG00000121057	ENST00000337714:c.*79A>C,ENST00000572557:c.*79A>C,ENST00000481416:c.*1112A>C,ENST00000539273:c.*79A>C,ENST00000573326:c.*303A>C	NA	NA	Score=321;Name=lod=27	NA	17q22	NA	NA	NA	NA	rs117948788	0.01	0.01	0.006	0.00958466	0.0189	NA	0.0086	NA	0.0235	0.02	NA	0.01	NA	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.667976	2.667976	NA	NA	NA	NA	0.014	NA	5.3144334
1121	1	53461045	53461045	A	G	intronic	SCP2	NA	NA	NA	ncRNA_exonic	ENSG00000226147	NA	NA	NA	Score=855;Name=lod=3987	NA	1p32.3	NA	NA	NA	NA	rs17366570	0.01	0.01	0.007	0.00778754	0.0189	NA	0.0245	0.0015	0.001	0.01	NA	0.02	0.002	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.107579	NA	NA	NA	NA	NA	NA	NA	5.3144333
1121	2	165996107	165996107	T	A	exonic	SCN3A	NA	synonymous SNV	SCN3A:NM_001081676:exon14:c.A1884T:p.T628T,SCN3A:NM_001081677:exon14:c.A1884T:p.T628T,SCN3A:NM_006922:exon14:c.A2031T:p.T677T	exonic	ENSG00000153253	NA	synonymous SNV	ENSG00000153253:ENST00000440431:exon13:c.A1884T:p.T628T,ENSG00000153253:ENST00000283254:exon14:c.A2031T:p.T677T,ENSG00000153253:ENST00000360093:exon14:c.A2031T:p.T677T,ENSG00000153253:ENST00000409101:exon14:c.A1884T:p.T628T	Score=558;Name=lod=248	NA	2q24.3	NA	NA	NA	NA	rs1946892	0.62	0.62	0.614	0.634585	0.4245	0.8165	0.5778	0.7277	0.5777	0.43	0.78	0.61	0.73	0.5068	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.25624	1.25624	NA	0.421163	0.662506	NA	0.587	NA	5.3142036
1121	6	49928116	49928116	G	A	exonic	DEFB114	NA	synonymous SNV	DEFB114:NM_001037499:exon2:c.C99T:p.Y33Y	exonic	ENSG00000177684	NA	synonymous SNV	ENSG00000177684:ENST00000322066:exon2:c.C99T:p.Y33Y	NA	NA	6p12.3	NA	NA	NA	NA	rs17736782	0.07	0.07	0.058	0.0593051	0.1282	0.0079	0.0648	0.0272	0.0808	0.13	0.01	0.08	0.03	0.0959	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.573525	NA	NA	0.128751	0.047435	NA	0.022	NA	5.3138156
1121	1	33799900	33799900	G	A	intronic	PHC2	NA	NA	NA	intronic	ENSG00000134686	NA	NA	NA	NA	NA	1p35.1	NA	Name=RXRA,TCF4,HDAC2_(SC-6296)	Name=71	NA	rs12734630	0.17	0.17	0.139	0.171126	0.2346	0.2113	0.17	0.0182	0.272	0.23	0.2	0.17	0.03	0.21	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.259764	NA	NA	0.241744	0.05084	NA	0.138	NA	5.313656
1121	14	21967438	21967438	G	A	intronic	METTL3	NA	NA	NA	UTR3	ENSG00000165819	ENST00000537163:c.*974C>T,ENST00000543235:c.*794C>T	NA	NA	NA	NA	14q11.2	NA	Name=Pbx3,EBF,EBF1_(C-8)	Name=31	NA	rs3168880	0.27	0.27	0.267	0.27476	0.2793	0.2123	0.1758	0.3374	0.32	0.27	0.21	0.19	0.39	0.2793	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.489259	NA	NA	0.294651	0.307535	NA	0.246	NA	5.3134157
1121	17	3635768	3635768	A	C	intronic	ITGAE	NA	NA	NA	intronic	ENSG00000083457	NA	NA	NA	NA	NA	17p13.2	NA	Name=IRF4_(M-17),Rad21,CTCF	Name=76	NA	rs3744678	0.32	0.32	0.309	0.328674	0.2097	0.1528	0.402	0.671	0.1176	0.2	0.16	0.33	0.66	0.2523	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.474672	NA	NA	0.225	0.583069	NA	0.413	NA	5.313
1121	4	183959226	183959226	T	G	ncRNA_exonic	FAM92A1P2	NA	NA	NA	ncRNA_exonic	ENSG00000230219	NA	NA	NA	Score=566;Name=lod=265	NA	4q35.1	NA	NA	NA	NA	rs2016910	0.35	0.35	0.317	0.358626	0.3539	0.3373	0.4207	0.2421	0.499	0.37	0.36	0.36	0.28	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.441963	NA	NA	NA	NA	NA	0.362	NA	5.3127666
1121	4	187538330	187538330	G	A	exonic	FAT1	NA	synonymous SNV	FAT1:NM_005245:exon11:c.C8904T:p.A2968A	exonic	ENSG00000083857	NA	synonymous SNV	ENSG00000083857:ENST00000441802:exon11:c.C8904T:p.A2968A	Score=619;Name=lod=439	NA	4q35.2	NA	NA	NA	NA	rs1280099	0.43	0.43	0.403	0.416134	0.4662	0.2808	0.4683	0.5424	0.2965	0.45	0.31	0.47	0.51	0.4398	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.992758	NA	NA	0.448077	0.536672	NA	0.5	NA	5.3125896
1121	16	28549508	28549508	G	A	exonic	NUPR1	NA	synonymous SNV	NUPR1:NM_001042483:exon2:c.C135T:p.P45P	exonic	ENSG00000176046	NA	synonymous SNV	ENSG00000176046:ENST00000395641:exon2:c.C135T:p.P45P	NA	NA	16p11.2	NA	NA	NA	NA	rs151227	0.08	0.08	0.069	0.0794728	0.1223	0.004	0.0994	0.0855	0.091	0.11	0.01	0.12	0.1	0.1002	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.421246	NA	NA	0.131628	0.088075	NA	0.08	NA	5.3125386
1121	17	45994154	45994154	G	A	exonic	SP2	NA	synonymous SNV	SP2:NM_003110:exon3:c.G717A:p.P239P	exonic	ENSG00000167182	NA	synonymous SNV	ENSG00000167182:ENST00000376741:exon3:c.G717A:p.P239P	NA	NA	17q21.32	Score=979;Name=V$AP2REP_01	NA	NA	NA	rs2229358	0.51	0.51	0.465	0.49381	0.4602	0.7748	0.4625	0.3457	0.4611	0.44	0.75	0.46	0.35	0.4601	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.112731	NA	NA	0.433953	0.368134	NA	0.384	NA	5.3124136
1121	6	18406387	18406387	G	A	intronic	RNF144B	NA	NA	NA	intronic	ENSG00000137393	NA	NA	NA	NA	NA	6p22.3	NA	Name=p300,GATA3_(SC-268)	Name=3	NA	rs6925570	0.63	0.63	0.646	0.604233	0.6879	0.6736	0.5504	0.5371	0.5757	0.69	0.66	0.57	0.54	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.312832	NA	NA	NA	NA	NA	0.652	NA	5.3121
1121	2	130893676	130893676	C	T	ncRNA_intronic	CCDC74B-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000223760	NA	NA	NA	Score=602;Name=lod=372	NA	2q21.1	NA	NA	NA	NA	rs56036584	0.41	0.41	0.351	0.398363	0.3549	0.4435	0.4452	0.3449	0.4356	0.37	0.48	0.43	0.37	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.608684	NA	NA	NA	NA	NA	0.543	NA	5.3117666
1121	2	239141221	239141221	G	C	ncRNA_exonic	LOC643387	NA	NA	NA	ncRNA_exonic	ENSG00000225057	NA	NA	NA	Score=821;Name=lod=2880	NA	2q37.3	NA	NA	NA	NA	rs11694487	0.23	0.23	0.199	0.201877	0.3549	0.121	0.2695	0.1195	0.1912	0.36	0.12	0.32	0.11	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.022616	NA	NA	NA	NA	NA	0.261	NA	5.3117666
1121	4	183959850	183959850	C	G	ncRNA_exonic	FAM92A1P2	NA	NA	NA	ncRNA_exonic	ENSG00000230219	NA	NA	NA	Score=600;Name=lod=366	NA	4q35.1	NA	NA	NA	NA	rs1075695	0.35	0.35	0.317	0.355631	0.3549	0.3403	0.4164	0.2307	0.498	0.38	0.36	0.36	0.27	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.766519	NA	NA	NA	NA	NA	0.362	NA	5.3117666
1121	1	160062340	160062340	G	A	exonic	IGSF8	NA	synonymous SNV	IGSF8:NM_052868:exon5:c.C1458T:p.D486D,IGSF8:NM_001206665:exon6:c.C1458T:p.D486D	exonic	ENSG00000162729	NA	synonymous SNV	ENSG00000162729:ENST00000314485:exon5:c.C1458T:p.D486D,ENSG00000162729:ENST00000368086:exon5:c.C1458T:p.D486D	NA	NA	1q23.2	NA	NA	NA	NA	rs41265757	0.11	0.11	0.072	0.0946486	0.1004	0.1786	0.1643	0.0091	0.0685	0.11	0.16	0.15	0.01	0.1321	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.720517	NA	NA	0.122732	0.022944	NA	0.21	NA	5.3114346
1121	19	53313828	53313828	C	A	intronic	ZNF28	NA	NA	NA	ncRNA_exonic	ENSG00000255875	NA	NA	NA	Score=687;Name=lod=824	NA	19q13.41	NA	NA	NA	NA	rs73067555	0.04	0.04	0.029	0.0385383	0.0219	0.001	0.0403	0.0923	0.0204	0.03	0.0017	0.05	0.09	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.48122	NA	NA	NA	NA	NA	0.029	NA	5.3114333
1121	19	53313841	53313841	G	A	intronic	ZNF28	NA	NA	NA	ncRNA_exonic	ENSG00000255875	NA	NA	NA	Score=687;Name=lod=824	NA	19q13.41	NA	NA	NA	NA	rs76034899	0.05	0.05	0.045	0.0517173	0.0219	0.001	0.0447	0.1407	0.0194	0.03	0.0017	0.05	0.14	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.445043	NA	NA	NA	NA	NA	0.036	NA	5.3114333
1121	18	57445858	57445858	A	G	intergenic	CCBE1,PMAIP1	dist=81214;dist=121334	NA	NA	ncRNA_exonic	ENSG00000267486	NA	NA	NA	Score=644;Name=lod=554	NA	18q21.32	NA	NA	Name=2	NA	rs1791350	0.77	0.77	0.786	0.766174	0.6889	0.7768	0.6902	0.9244	0.6748	0.7	0.77	0.7	0.92	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.526594	NA	NA	NA	NA	NA	0.797	NA	5.3111
1121	7	135406176	135406176	A	G	exonic	SLC13A4	NA	synonymous SNV	SLC13A4:NM_012450:exon2:c.T195C:p.L65L	exonic	ENSG00000164707	NA	synonymous SNV	ENSG00000164707:ENST00000354042:exon2:c.T195C:p.L65L	Score=554;Name=lod=237	NA	7q33	NA	NA	NA	NA	rs4596594	0.43	0.43	0.432	0.45028	0.4553	0.4435	0.3184	0.5091	0.4663	0.44	0.43	0.34	0.5	0.4422	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.72872	2.72872	NA	0.458372	0.516795	ID=COSM1568616;OCCURENCE=1(large_intestine)	0.478	NA	5.3107946
1121	4	183959891	183959891	A	T	ncRNA_exonic	FAM92A1P2	NA	NA	NA	ncRNA_exonic	ENSG00000230219	NA	NA	NA	Score=600;Name=lod=366	NA	4q35.1	NA	NA	NA	NA	rs1075694	0.35	0.35	0.327	0.359425	0.3559	0.3403	0.4207	0.2421	0.498	0.37	0.36	0.36	0.28	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.098057	NA	NA	NA	NA	NA	0.362	NA	5.3107666
1121	19	12090662	12090662	C	A	UTR3	ZNF763	NM_001012753:c.*738C>A	NA	NA	UTR3	ENSG00000197054	ENST00000343949:c.*738C>A	NA	NA	NA	NA	19p13.2	NA	Name=SETDB1	NA	NA	rs114419819	0.01	0.01	0.009	0.0133786	0.0229	0.006	0.0144	0.003	0.0245	0.02	0.01	0.02	0.01	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.340527	NA	NA	NA	NA	NA	0.007	NA	5.3104334
1121	9	140262424	140262424	C	T	exonic	EXD3	NA	synonymous SNV	EXD3:NM_017820:exon6:c.G480A:p.A160A	exonic	ENSG00000187609	NA	synonymous SNV	ENSG00000187609:ENST00000340951:exon6:c.G480A:p.A160A,ENSG00000187609:ENST00000479452:exon6:c.G480A:p.A160A	NA	NA	9q34.3	NA	NA	NA	NA	rs11507683	0.1	0.1	0.086	0.0864617	0.1382	0.0288	0.0749	0.1475	0.0184	0.14	0.04	0.09	0.13	0.1016	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.535482	NA	NA	0.116491	0.139307	NA	0.08	NA	5.3103756
1121	9	123917020	123917020	T	A	exonic	CNTRL	NA	synonymous SNV	CNTRL:NM_007018:exon25:c.T4194A:p.V1398V	exonic	ENSG00000119397	NA	synonymous SNV	ENSG00000119397:ENST00000431571:exon8:c.T201A:p.V67V,ENSG00000119397:ENST00000373847:exon16:c.T2538A:p.V846V,ENSG00000119397:ENST00000373850:exon16:c.T2538A:p.V846V,ENSG00000119397:ENST00000238341:exon25:c.T4194A:p.V1398V,ENSG00000119397:ENST00000373855:exon27:c.T4194A:p.V1398V	Score=516;Name=lod=166	NA	9q33.2	NA	NA	NA	NA	rs3736855	0.42	0.42	0.371	0.432109	0.4513	0.5694	0.5	0.1233	0.6401	0.46	0.58	0.5	0.13	0.4648	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.230569	NA	NA	0.440233	0.176804	NA	0.384	NA	5.3103336
1121	2	207825656	207825656	A	T	exonic	CPO	NA	synonymous SNV	CPO:NM_173077:exon6:c.A564T:p.A188A	exonic	ENSG00000144410	NA	synonymous SNV	ENSG00000144410:ENST00000272852:exon6:c.A564T:p.A188A	Score=475;Name=lod=114	NA	2q33.3	NA	NA	NA	NA	rs13397039	0.39	0.39	0.4	0.382987	0.4573	0.4058	0.2579	0.3707	0.3885	0.45	0.39	0.29	0.38	0.4238	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.189305	NA	NA	0.475349	0.377213	NA	0.486	NA	5.3102176
1121	6	41888827	41888827	C	G	UTR5	MED20	NM_004275:c.-71G>C	NA	NA	UTR5	ENSG00000124641	ENST00000265350:c.-71G>C,ENST00000409312:c.-71G>C,ENST00000409060:c.-71G>C,ENST00000434077:c.-3197G>C	NA	NA	NA	NA	6p21.1	NA	Name=ELF1_(SC-631),HEY1,NFKB,Max,GR,c-Myc,SRF,GRp20,PAX5-C20,PAX5-N19,EBF1_(C-8),CEBPB,IRF1,TBP,Pol2(b),TAF1,JunD,GABP,HNF4A_(H-171),Pol2(phosphoS2),YY1,Egr-1,Pol2,ATF3,PU.1,Mxi1_(bHLH),NRSF,SP1,MEF2A,HDAC2_(SC-6296),ZNF263,IRF4_(M-17),Pol2-4H8,YY1_(C-20),HA-E2F1,BRCA1_(C-1863),c-Jun	Name=148	NA	rs2274578	0.49	0.49	0.501	0.482628	0.504	0.4603	0.3256	0.6029	0.4325	0.51	0.44	0.35	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.164682	NA	NA	0.51917	0.598266	NA	0.522	NA	5.3101634
1121	6	31322782	31322782	C	G	intronic	HLA-B	NA	NA	NA	intronic	ENSG00000234745	NA	NA	NA	NA	NA	6p21.33	NA	Name=Pol2-4H8	Name=2	NA	rs2596496	0.71	0.71	0.726	0.746805	0.6899	0.6687	0.7349	0.8328	0.7781	0.66	0.67	0.72	0.81	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.166063	NA	NA	NA	NA	NA	0.775	NA	5.3101
1121	9	136944465	136944465	T	C	intergenic	BRD3,WDR5	dist=11324;dist=56745	NA	NA	ncRNA_exonic	ENSG00000271525	NA	NA	NA	Score=426;Name=lod=72	NA	9q34.2	NA	Name=PU.1	NA	NA	rs2506703	0.7	0.7	0.724	0.713458	0.6899	0.6587	0.487	0.8593	0.7577	0.7	0.66	0.54	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.184287	NA	NA	NA	NA	NA	0.667	NA	5.3101
1121	21	34926260	34926260	C	T	exonic	SON	NA	nonsynonymous SNV	SON:NM_032195:exon3:c.C4723T:p.R1575C,SON:NM_138927:exon3:c.C4723T:p.R1575C	exonic	ENSG00000159140	NA	nonsynonymous SNV	ENSG00000159140:ENST00000290239:exon3:c.C4723T:p.R1575C,ENSG00000159140:ENST00000300278:exon3:c.C4723T:p.R1575C,ENSG00000159140:ENST00000356577:exon3:c.C4723T:p.R1575C,ENSG00000159140:ENST00000381679:exon3:c.C4723T:p.R1575C,ENSG00000159140:ENST00000455528:exon3:c.C4723T:p.R1575C	NA	NA	21q22.11	NA	NA	NA	NA	rs13047599	0.72	0.72	0.705	0.716254	0.672	0.751	0.683	0.7814	0.6616	0.66	0.74	0.73	0.76	0.6779	0.77	0.51	T	0.001	B	0.0	B	0.199	N	1.000	P	-1.355	N	2.99	T	-1.077	T	0.000	T	0.383	-2.75	0	0.837	0.038	-0.042	4.394	-2.749948	NA	1	0.673372	0.766455	NA	0.609	NA	5.3100614
1121	4	155720274	155720274	T	C	exonic	RBM46	NA	synonymous SNV	RBM46:NM_001277171:exon4:c.T960C:p.N320N,RBM46:NM_001277173:exon4:c.T960C:p.N320N,RBM46:NM_144979:exon4:c.T960C:p.N320N	exonic	ENSG00000151962	NA	synonymous SNV	ENSG00000151962:ENST00000281722:exon4:c.T960C:p.N320N,ENSG00000151962:ENST00000510397:exon4:c.T960C:p.N320N,ENSG00000151962:ENST00000514866:exon4:c.T960C:p.N320N	Score=690;Name=lod=849	NA	4q32.1	NA	NA	NA	NA	rs156502	0.66	0.66	0.662	0.683706	0.4155	0.747	0.6787	0.9213	0.5767	0.42	0.79	0.61	0.9	0.531	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.17126	NA	NA	0.410116	0.844984	NA	0.717	NA	5.3100506
1121	5	148408101	148408101	A	G	exonic	SH3TC2	NA	synonymous SNV	SH3TC2:NM_024577:exon11:c.T1194C:p.G398G	exonic	ENSG00000169247	NA	synonymous SNV	ENSG00000169247:ENST00000504690:exon11:c.T1194C:p.G398G,ENSG00000169247:ENST00000512049:exon11:c.T1173C:p.G391G,ENSG00000169247:ENST00000515425:exon11:c.T1194C:p.G398G,ENSG00000169247:ENST00000394358:exon12:c.T849C:p.G283G	NA	NA	5q32	NA	NA	NA	NA	rs1432793	0.43	0.43	0.455	0.437101	0.4652	0.2222	0.3516	0.6172	0.4468	0.48	0.26	0.4	0.57	0.4456	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.085177	NA	NA	0.44593	0.560372	ID=COSM1130839,COSM1130840;OCCURENCE=1(prostate)	0.572	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118334.2;CLNDSDB=.;CLNDSDBID=.	5.3099366
1121	6	71665986	71665986	G	A	exonic	B3GAT2	NA	synonymous SNV	B3GAT2:NM_080742:exon1:c.C147T:p.G49G	exonic	ENSG00000112309	NA	synonymous SNV	ENSG00000112309:ENST00000230053:exon1:c.C147T:p.G49G	Score=336;Name=lod=31	NA	6q13	NA	NA	NA	NA	rs1574490	0.54	0.54	0.478	0.532748	0.3926	0.6448	0.6066	0.6104	0.4039	0.38	0.63	0.63	0.6	0.5326	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.506139	NA	NA	0.43153	0.55939	NA	0.152	NA	5.3099366
1121	5	79616083	79616083	G	C	exonic	SPZ1	NA	nonsynonymous SNV	SPZ1:NM_032567:exon1:c.G49C:p.V17L	exonic	ENSG00000164299	NA	nonsynonymous SNV	ENSG00000164299:ENST00000296739:exon1:c.G49C:p.V17L,ENSG00000164299:ENST00000511881:exon2:c.G49C:p.V17L	NA	NA	5q14.1	NA	NA	NA	NA	rs1862136	0.78	0.78	0.803	0.791933	0.6342	0.9395	0.6729	0.8555	0.8006	0.64	0.95	0.68	0.85	0.7154	0.95	1	T	0.0	B	0.0	B	0.468	N	1.000	P	-0.455	N	1.45	T	-0.980	T	0.000	T	0.303	-1.351	0.028	1.24	0.011	-0.295	4.162	-1.351212	NA	1	0.673939	0.825785	NA	0.739	NA	5.3097944
1121	19	579627	579627	C	T	exonic	BSG	NA	synonymous SNV	BSG:NM_198589:exon2:c.C195T:p.D65D,BSG:NM_001728:exon3:c.C543T:p.D181D	exonic	ENSG00000172270	NA	synonymous SNV	ENSG00000172270:ENST00000353555:exon2:c.C195T:p.D65D,ENSG00000172270:ENST00000573216:exon2:c.C171T:p.D57D,ENSG00000172270:ENST00000333511:exon3:c.C543T:p.D181D	NA	NA	19p13.3	NA	NA	NA	NA	rs1803202	0.15	0.15	0.14	0.188698	0.1103	0.2282	0.0908	0.2095	0.2699	0.11	0.2	0.11	0.19	0.1461	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.079344	NA	NA	0.100605	0.169091	NA	0.094	NA	5.3096616
1121	1	211032756	211032756	T	A	intronic	KCNH1	NA	NA	NA	ncRNA_exonic	ENSG00000224668	NA	NA	NA	Score=696;Name=lod=895	NA	1q32.2	NA	NA	NA	NA	rs61848964	0.01	0.01	0.006	0.00698882	0.0239	NA	0.0072	0.0015	0.0041	0.02	NA	0.01	0.002	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.294475	NA	NA	NA	NA	NA	0.109	NA	5.3094333
1121	8	97345590	97345590	A	G	intronic	PTDSS1	NA	NA	NA	intronic	ENSG00000156471	NA	NA	NA	NA	NA	8q22.1	NA	Name=CTCF,Rad21,SMC3_(ab9263),Znf143_(16618-1-AP),CTCFL_(SC-98982),CTCF_(C-20),CTCF_(SC-5916)	Name=142	NA	rs3735986	0.7	0.7	0.686	0.701078	0.6909	0.7044	0.6513	0.6823	0.7689	0.7	0.74	0.68	0.65	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.590249	1.590249	NA	NA	NA	NA	0.717	NA	5.3091
1121	17	7358861	7358861	T	C	intronic	CHRNB1	NA	NA	NA	intronic	ENSG00000170175	NA	NA	NA	NA	NA	17p13.1	NA	Name=USF-1,c-Myc,NFKB,SIX5,SRF,YY1,ERalpha_a,CEBPB,BAF170,ELF1_(SC-631),PU.1,YY1_(C-20),USF1_(SC-8983),TR4,ETS1,Znf143_(16618-1-AP),GABP	Name=146	NA	rs2302762	0.49	0.49	0.449	0.476038	0.6909	0.2133	0.5533	0.3593	0.6288	0.69	0.23	0.61	0.37	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.095398	NA	NA	NA	NA	NA	0.449	NA	5.3091
1121	22	22780581	22780581	C	T	intergenic	LOC96610,ZNF280B	dist=103257;dist=58191	NA	NA	ncRNA_exonic	ENSG00000253889	NA	NA	NA	Score=309;Name=lod=24	NA	22q11.22	NA	Name=HEY1	NA	NA	rs165917	0.64	0.64	0.649	0.621805	0.6918	0.5486	0.4813	0.7148	0.5992	0.7	0.58	0.52	0.73	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.321202	NA	NA	NA	NA	NA	0.63	NA	5.3082
1121	4	187534375	187534375	A	G	exonic	FAT1	NA	synonymous SNV	FAT1:NM_005245:exon13:c.T9351C:p.D3117D	exonic	ENSG00000083857	NA	synonymous SNV	ENSG00000083857:ENST00000441802:exon13:c.T9351C:p.D3117D	Score=464;Name=lod=103	NA	4q35.2	NA	NA	NA	NA	rs2249917	0.43	0.43	0.424	0.417931	0.4702	0.2808	0.4683	0.5446	0.2986	0.45	0.31	0.47	0.52	0.4408	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.743433	NA	NA	0.44814	0.525	NA	0.5	NA	5.3075266
1121	11	9715628	9715628	C	T	intronic	SWAP70	NA	NA	NA	intronic	ENSG00000133789	NA	NA	NA	NA	NA	11p15.4	NA	Name=CTCF,USF-1	Name=7	NA	rs360049	0.68	0.68	0.641	0.697284	0.6928	0.6935	0.7291	0.5711	0.8538	0.68	0.72	0.77	0.58	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.688364	NA	NA	NA	NA	NA	0.645	NA	5.3072
1121	8	144945792	144945792	T	C	exonic	EPPK1	NA	nonsynonymous SNV	EPPK1:NM_031308:exon1:c.A1630G:p.K544E	exonic	ENSG00000227184	NA	nonsynonymous SNV	ENSG00000227184:ENST00000525985:exon2:c.A1630G:p.K544E	NA	NA	8q24.3	NA	NA	NA	NA	rs13255110	0.56	0.56	0.561	0.5625	0.6809	0.2798	0.6844	0.5983	0.5971	0.69	0.29	0.7	0.59	0.6486	0.7	1	T	0.0	B	0.0	B	.	.	1.000	P	.	.	-0.16	T	-0.939	T	0.000	T	0.015	-2.333	0.004	0.205	-0.412	-0.015	6.537	-2.333404	NA	NA	0.696841	0.651614	ID=COSM454171;OCCURENCE=1(breast)	0.362	NA	5.3069924
1121	6	132910634	132910634	C	T	exonic	TAAR5	NA	synonymous SNV	TAAR5:NM_003967:exon1:c.G192A:p.A64A	exonic	ENSG00000135569	NA	synonymous SNV	ENSG00000135569:ENST00000258034:exon1:c.G192A:p.A64A	NA	NA	6q23.2	NA	NA	NA	NA	rs3813354	0.19	0.19	0.186	0.239217	0.1044	0.3204	0.1859	0.1929	0.3947	0.09	0.31	0.18	0.19	0.161	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.549768	NA	NA	0.094302	0.162052	NA	0.188	NA	5.3069646
1121	14	101454578	101454578	A	G	upstream;downstream	SNORD114-28;SNORD114-27	NA	NA	NA	upstream;downstream	ENSG00000200480;ENSG00000200636	NA	NA	NA	NA	NA	14q32.31	NA	Name=GR,c-Fos	Name=47	NA	rs74797707	0.06	0.06	0.061	0.0810703	0.1382	0.0238	0.0605	0.0197	0.1789	0.13	0.02	0.05	0.04	0.104	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.670012	NA	NA	0.117529	0.030822	NA	0.109	NA	5.3069376
1121	14	101454594	101454594	A	G	upstream;downstream	SNORD114-28;SNORD114-27	NA	NA	NA	upstream;downstream	ENSG00000200480;ENSG00000200636	NA	NA	NA	NA	NA	14q32.31	NA	Name=GR,c-Fos	Name=47	NA	rs78341223	0.06	0.06	0.064	0.0810703	0.1382	0.0238	0.0605	0.0197	0.1789	0.13	0.02	0.05	0.04	0.1042	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.652575	NA	NA	0.117529	0.030822	NA	0.109	NA	5.3067376
1121	13	76369670	76369670	T	C	intronic	LMO7	NA	NA	NA	ncRNA_intronic	ENSG00000261553	NA	NA	NA	NA	NA	13q22.2	Score=956;Name=V$LHX3_01	NA	NA	NA	rs17065050	0.01	0.01	0.01	0.0151757	0.0268	NA	0.0072	0.0008	0.044	0.03	NA	0.01	NA	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.736972	NA	NA	NA	NA	NA	NA	NA	5.3065333
1121	8	110355728	110355728	T	G	UTR3	ENY2	NM_020189:c.*18T>G,NM_001193557:c.*18T>G	NA	NA	UTR3	ENSG00000120533	ENST00000521688:c.*18T>G,ENST00000521662:c.*18T>G,ENST00000522766:c.*198T>G,ENST00000517311:c.*198T>G,ENST00000339942:c.*160T>G,ENST00000520147:c.*126T>G,ENST00000523335:c.*160T>G	NA	NA	Score=663;Name=lod=657	NA	8q23.1	NA	NA	NA	NA	rs116980247	0.01	0.01	0.002	0.00898562	0.0089	NA	0.0115	NA	0.0286	0.01	NA	0.01	NA	0.0089	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.782837	1.782837	NA	0.009209	0.00164	NA	NA	NA	5.3063244
1121	6	31237061	31237061	C	T	intronic	HLA-C	NA	NA	NA	intronic	ENSG00000204525	NA	NA	NA	NA	NA	6p21.33	NA	Name=Pol2-4H8	Name=3	NA	rs2894204	0.72	0.72	0.65	0.73103	0.6938	0.746	0.7911	0.7262	0.7178	0.69	0.73	0.78	0.71	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.263839	NA	NA	NA	NA	NA	0.58	NA	5.3062
1121	3	186437944	186437944	T	C	exonic	KNG1	NA	synonymous SNV	KNG1:NM_000893:exon2:c.T246C:p.D82D,KNG1:NM_001102416:exon2:c.T246C:p.D82D,KNG1:NM_001166451:exon2:c.T246C:p.D82D	exonic	ENSG00000113889	NA	synonymous SNV	ENSG00000113889:ENST00000265023:exon2:c.T246C:p.D82D,ENSG00000113889:ENST00000287611:exon2:c.T246C:p.D82D,ENSG00000113889:ENST00000447445:exon2:c.T246C:p.D82D	NA	NA	3q27.3	NA	NA	NA	NA	rs5029980	0.1	0.1	0.088	0.0974441	0.1272	0.0595	0.1455	0.0567	0.1268	0.13	0.04	0.15	0.06	0.1217	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.342897	NA	NA	0.111628	0.068543	ID=COSM149537,COSM149538;OCCURENCE=1(stomach)	0.058	NA	5.3061386
1121	9	90425693	90425693	G	A	intergenic	CTSL3P,CTSL1P8	dist=23894;dist=33967	NA	NA	intergenic	ENSG00000188029,ENSG00000232743	dist=23894;dist=5687	NA	NA	NA	NA	9q22.1	NA	Name=NRSF,eGFP-JunD,GATA-1,GABP,CEBPB,STAT1,GATA-2,Pol2-4H8,Pol2(b),TAL1_(SC-12984),GATA2_(CG2-96),IRF1,CCNT2,eGFP-GATA2,MafK_(ab50322)	Name=3	NA	rs57199069	0.04	0.04	0.058	0.048123	0.0278	NA	0.0346	0.1399	0.0041	0.02	NA	0.04	0.13	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.108358	NA	NA	NA	NA	NA	0.065	NA	5.3055334
1121	14	70352100	70352100	C	T	intronic	SMOC1	NA	NA	NA	ncRNA_exonic	ENSG00000242071	NA	NA	NA	Score=799;Name=lod=2366	NA	14q24.2	NA	NA	NA	NA	rs139403281	0.01	0.01	0.008	0.00838658	0.0278	NA	0.013	NA	0.0051	0.03	NA	0.01	NA	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.001802	NA	NA	NA	NA	NA	0.007	NA	5.3055333
1121	16	10206127	10206127	A	T	intronic	GRIN2A	NA	NA	NA	ncRNA_exonic	ENSG00000261647	NA	NA	NA	Score=809;Name=lod=2586	NA	16p13.2	NA	NA	NA	NA	rs113366903	0.05	0.05	0.038	0.0523163	0.0278	0.002	0.036	0.1543	0.0031	0.02	0.0035	0.04	0.16	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.607037	NA	NA	NA	NA	NA	0.036	NA	5.3055333
1121	16	10206520	10206520	G	C	intronic	GRIN2A	NA	NA	NA	ncRNA_exonic	ENSG00000261647	NA	NA	NA	Score=809;Name=lod=2586	NA	16p13.2	NA	NA	NA	NA	rs112333946	0.05	0.05	0.039	0.0523163	0.0278	0.002	0.036	0.1543	0.0031	0.02	0.0035	0.04	0.16	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.672046	NA	NA	NA	NA	NA	0.036	NA	5.3055333
1121	22	23632621	23632621	G	C	intronic	BCR	NA	NA	NA	intronic	ENSG00000186716	NA	NA	NA	NA	NA	22q11.23	NA	Name=ZNF263	Name=91	NA	rs9608101	0.17	0.17	0.174	0.172923	0.2525	0.0179	0.1571	0.2088	0.2137	0.25	0.02	0.19	0.22	0.2034	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.91562	NA	NA	0.238605	0.193373	NA	0.196	NA	5.305495
1121	18	3447871	3447871	T	C	intronic	TGIF1	NA	NA	NA	intronic	ENSG00000177426	NA	NA	NA	NA	NA	18p11.31	NA	Name=STAT3,Pol2,SMC3_(ab9263),CTCF	Name=107	NA	rs151472	0.66	0.66	0.68	0.633187	0.6948	0.3988	0.5865	0.9554	0.409	0.67	0.44	0.57	0.95	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.37065	1.37065	NA	NA	NA	NA	0.652	NA	5.3052
1121	19	12256358	12256358	T	G	exonic	ZNF625	NA	synonymous SNV	ZNF625:NM_145233:exon4:c.A873C:p.R291R	exonic	ENSG00000257591	NA	synonymous SNV	ENSG00000257591:ENST00000355738:exon4:c.A675C:p.R225R,ENSG00000257591:ENST00000439556:exon4:c.A873C:p.R291R,ENSG00000257591:ENST00000542938:exon4:c.A675C:p.R225R	NA	NA	19p13.2	NA	Name=KAP1,SETDB1,ZNF274	NA	NA	rs12972621	0.38	0.38	0.356	0.39996	0.4533	0.6369	0.3862	0.0295	0.6115	0.44	0.58	0.41	0.04	0.4423	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.444977	1.444977	NA	0.466047	0.098275	NA	0.297	NA	5.3050196
1122	7	128641226	128641226	G	C	exonic	TNPO3	NA	synonymous SNV	TNPO3:NM_001191028:exon6:c.C759G:p.L253L,TNPO3:NM_012470:exon6:c.C759G:p.L253L	exonic	ENSG00000064419	NA	synonymous SNV	ENSG00000064419:ENST00000265388:exon6:c.C759G:p.L253L,ENSG00000064419:ENST00000393245:exon6:c.C759G:p.L253L,ENSG00000064419:ENST00000471166:exon6:c.C759G:p.L253L,ENSG00000064419:ENST00000471234:exon6:c.C759G:p.L253L,ENSG00000064419:ENST00000482320:exon7:c.C561G:p.L187L	Score=642;Name=lod=543	NA	7q32.1	NA	NA	NA	NA	rs2305324	0.36	0.36	0.343	0.341853	0.4801	0.3988	0.3199	0.1218	0.454	0.48	0.4	0.33	0.13	0.4097	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.115692	NA	NA	0.472093	0.175443	NA	0.312	NA	5.3047736
1122	14	21944955	21944955	G	C	intronic	RAB2B	NA	NA	NA	UTR5	ENSG00000092203	ENST00000405508:c.-483G>C	NA	NA	NA	NA	14q11.2	NA	Name=Pol2,HEY1,ZEB1_(SC-25388),SRF,Egr-1,GATA-2,Pol2-4H8	Name=68	NA	rs17516362	0.29	0.29	0.294	0.305511	0.2793	0.2579	0.1873	0.4191	0.3119	0.27	0.27	0.2	0.4	0.2892	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.245408	NA	NA	0.293605	0.382433	NA	0.29	NA	5.3045617
1122	19	12090404	12090404	T	C	UTR3	ZNF763	NM_001012753:c.*480T>C	NA	NA	UTR3	ENSG00000197054	ENST00000343949:c.*480T>C	NA	NA	NA	NA	19p13.2	NA	Name=SETDB1,KAP1	NA	NA	rs388288	0.06	0.06	0.074	0.0810703	0.0288	0.006	0.0303	0.2466	0.0245	0.02	0.01	0.04	0.19	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.21812	NA	NA	NA	NA	NA	0.014	NA	5.3045334
1122	12	71065770	71065770	A	G	intronic	PTPRR	NA	NA	NA	ncRNA_exonic	ENSG00000257302	NA	NA	NA	Score=352;Name=lod=36	NA	12q15	NA	NA	NA	NA	rs117154533	0.01	0.01	0.01	0.0125799	0.0288	NA	0.0086	0.0008	0.0276	0.04	NA	0.01	NA	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.13254	NA	NA	NA	NA	NA	NA	NA	5.3045333
1122	12	71066558	71066558	A	G	intronic	PTPRR	NA	NA	NA	ncRNA_exonic	ENSG00000257302	NA	NA	NA	Score=577;Name=lod=295	NA	12q15	NA	NA	NA	NA	rs74959294	0.01	0.01	0.007	0.0125799	0.0288	NA	0.0086	0.0008	0.0276	0.04	NA	0.01	NA	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.016354	NA	NA	NA	NA	NA	NA	NA	5.3045333
1122	20	50342285	50342285	A	G	intronic	ATP9A	NA	NA	NA	intronic	ENSG00000054793	NA	NA	NA	NA	NA	20q13.2	NA	Name=FOXA1_(SC-101058),FOXA2_(SC-6554),p300,FOXA1_(C-20),HDAC2_(SC-6296),AP-2gamma,SRF	Name=10	NA	rs1205708	0.81	0.81	0.802	0.815895	0.6958	0.996	0.8127	0.7579	0.8344	0.7	1	0.79	0.76	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.056373	NA	NA	NA	NA	NA	0.906	NA	5.3042
1122	19	51109833	51109833	G	A	intergenic	SNAR-F,SYT3	dist=1491;dist=15401	NA	NA	intergenic	ENSG00000131409,ENSG00000213023	dist=38531;dist=14731	NA	NA	NA	NA	19q13.33	NA	Name=ZBTB33,SP1,E2F6,CTCF	Name=27	NA	rs117066094	0.01	0.01	0.008	0.00658946	0.0298	NA	0.0014	0.0008	0.001	0.04	NA	0.0028	0.002	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.664538	NA	NA	NA	NA	NA	NA	NA	5.3035334
1122	12	71066086	71066086	C	T	intronic	PTPRR	NA	NA	NA	ncRNA_exonic	ENSG00000257302	NA	NA	NA	Score=573;Name=lod=285	NA	12q15	NA	NA	NA	NA	rs77166304	0.01	0.01	0.01	0.0127796	0.0298	NA	0.0086	0.0008	0.0276	0.04	NA	0.01	NA	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.598992	NA	NA	NA	NA	NA	NA	NA	5.3035333
1122	14	88419924	88419924	A	G	intronic	GALC	NA	NA	NA	ncRNA_exonic	ENSG00000259096	NA	NA	NA	Score=369;Name=lod=42	NA	14q31.3	NA	NA	NA	NA	rs148047454	0.02	0.02	0.013	0.0191693	0.0298	0.0109	0.0086	0.0023	0.047	0.03	0.01	0.01	0.002	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.100132	NA	NA	NA	NA	NA	0.007	NA	5.3035333
1122	15	31229420	31229420	T	C	exonic	FAN1	NA	synonymous SNV	FAN1:NM_014967:exon14:c.T3015C:p.H1005H	exonic	ENSG00000198690	NA	synonymous SNV	ENSG00000198690:ENST00000362065:exon14:c.T3015C:p.H1005H	NA	NA	15q13.3	Score=1000;Name=V$AML1_01	NA	NA	NA	rs2955795	0.49	0.49	0.467	0.457069	0.4473	0.8294	0.4654	0.1089	0.5481	0.46	0.87	0.45	0.12	0.4755	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.032957	NA	NA	0.440349	0.168256	NA	0.565	NA	5.3035176
1122	17	73467897	73467897	A	T	UTR5	KIAA0195	NM_014738:c.-90A>T	NA	NA	UTR5	ENSG00000177728	ENST00000577380:c.-90A>T,ENST00000314256:c.-90A>T,ENST00000582186:c.-14127A>T,ENST00000579208:c.-90A>T,ENST00000581252:c.-18508A>T,ENST00000582455:c.-90A>T,ENST00000581519:c.-90A>T	NA	NA	NA	NA	17q25.1	NA	NA	Name=3	NA	rs58039730	0.03	0.03	0.035	0.0313498	0.0308	0.0258	0.0216	0.053	0.0153	0.03	0.02	0.03	0.05	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.003541	NA	NA	NA	NA	NA	0.007	NA	5.3025334
1122	3	46352759	46352759	G	C	intergenic	CCR3,CCR2	dist=44562;dist=42476	NA	NA	ncRNA_exonic	ENSG00000236736	NA	NA	NA	Score=586;Name=lod=321	NA	3p21.31	NA	NA	Name=9	NA	rs6441962	0.73	0.73	0.725	0.733227	0.6978	0.6885	0.6816	0.8858	0.6462	0.7	0.68	0.67	0.87	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.935666	NA	NA	NA	NA	NA	0.833	NA	5.3022
1122	1	160121899	160121899	A	G	exonic	ATP1A4	NA	synonymous SNV	ATP1A4:NM_144699:exon1:c.A69G:p.K23K	exonic	ENSG00000132681	NA	synonymous SNV	ENSG00000132681:ENST00000368081:exon1:c.A69G:p.K23K,ENSG00000132681:ENST00000477338:exon1:c.A69G:p.K23K	NA	NA	1q23.2	NA	NA	NA	NA	rs77332724	0.08	0.08	0.041	0.0662939	0.1173	0.0456	0.1225	0.0068	0.0757	0.12	0.04	0.11	0.01	0.1193	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.367747	NA	NA	0.127907	0.023377	NA	0.138	NA	5.3021596
1122	8	56362222	56362222	A	T	ncRNA_exonic	SBF1P1	NA	NA	NA	ncRNA_exonic	ENSG00000248522	NA	NA	NA	Score=500;Name=lod=144	NA	8q12.1	NA	NA	NA	NA	rs2622585	0.22	0.22	0.21	0.20607	0.3648	0.122	0.2248	0.1309	0.2178	0.35	0.1	0.25	0.13	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.302045	NA	NA	NA	NA	NA	0.167	NA	5.3018666
1122	7	143956742	143956742	C	G	ncRNA_intronic	LOC728377	NA	NA	NA	ncRNA_UTR5	ENSG00000243896	NA	NA	NA	NA	NA	7q35	Score=958;Name=V$NFAT_Q6	NA	NA	NA	rs57024608	NA	NA	0.142	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.1892	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.602367	NA	NA	0.175666	0.248281	NA	NA	NA	5.3018006
1122	2	99767304	99767304	T	C	UTR3	C2orf15	NM_144706:c.*7T>C	NA	NA	UTR3	ENSG00000241962	ENST00000302513:c.*7T>C,ENST00000409684:c.*7T>C	NA	NA	NA	NA	2q11.2	NA	NA	Name=26	NA	rs144085307	0.0032	0.0032	NA	0.00599042	0.008	NA	NA	0.0023	0.0194	0.01	NA	NA	0.002	0.0099	0.014	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.082916	NA	NA	0.013837	0.00227	NA	NA	NA	5.3015964
1122	8	143823858	143823858	C	G	upstream	SLURP1	NA	NA	NA	upstream	ENSG00000126233	NA	NA	NA	NA	NA	8q24.3	NA	Name=c-Myc	Name=10	NA	rs2572914	0.26	0.26	0.252	0.27516	0.1938	0.4206	0.1657	0.2776	0.2832	0.19	0.41	0.17	0.28	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.43173	NA	NA	0.171492	0.235166	NA	0.261	NA	5.3013746
1122	1	110738296	110738296	G	A	exonic	SLC6A17	NA	synonymous SNV	SLC6A17:NM_001010898:exon10:c.G1581A:p.S527S	exonic	ENSG00000197106	NA	synonymous SNV	ENSG00000197106:ENST00000331565:exon10:c.G1581A:p.S527S	Score=667;Name=lod=685	NA	1p13.3	NA	NA	NA	NA	rs2784140	0.32	0.32	0.291	0.289736	0.4543	0.3016	0.3847	0.0439	0.3732	0.46	0.32	0.39	0.05	0.4141	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.335356	1.335356	NA	0.497209	0.114616	ID=COSM146574;OCCURENCE=1(stomach)	0.391	NA	5.3010576
1122	7	100552550	100552550	T	C	intergenic	ACHE,MUC12	dist=59009;dist=60354	NA	NA	exonic	ENSG00000169894	NA	nonsynonymous SNV	ENSG00000169894:ENST00000319509:exon1:c.T1301C:p.L434P	NA	NA	7q22.1	NA	NA	NA	NA	rs73163762	NA	NA	0.147	0.153355	0.0258	0.0149	0.0677	0.3691	0.1963	NA	NA	NA	NA	0.507	0.054	0.56	T	0.0	B	0.0	B	.	.	1.000	P	-0.805	N	3.28	T	-0.942	T	0.006	T	0.072	-1.985	0.007	1.79	0.307	0.080	6.533	-1.985227	NA	0.13	NA	NA	NA	0.051	NA	5.3005334
1122	1	243788009	243788009	A	C	intronic	AKT3	NA	NA	NA	ncRNA_exonic	ENSG00000226766	NA	NA	NA	Score=602;Name=lod=373	NA	1q44	NA	NA	NA	NA	rs12032481	0.05	0.05	0.048	0.0497204	0.0328	0.124	0.013	0.0038	0.0787	0.03	0.13	0.02	0.01	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.022074	NA	NA	NA	NA	NA	0.087	NA	5.3005333
1122	11	102563739	102563739	C	T	exonic	MMP27	NA	synonymous SNV	MMP27:NM_022122:exon9:c.G1227A:p.G409G	exonic	ENSG00000137675	NA	synonymous SNV	ENSG00000137675:ENST00000260229:exon9:c.G1227A:p.G409G	NA	NA	11q22.2	Score=964;Name=V$IK2_01	NA	NA	NA	rs1276289	0.43	0.43	0.411	0.45008	0.4453	0.629	0.5072	0.2186	0.5429	0.45	0.59	0.47	0.21	0.4685	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.949499	NA	NA	0.452547	0.273491	ID=COSM428286;OCCURENCE=1(breast)	0.457	NA	5.3003196
1122	17	62796759	62796759	A	C	ncRNA_exonic	PLEKHM1P	NA	NA	NA	ncRNA_exonic	ENSG00000214176	NA	NA	NA	Score=670;Name=lod=706	NA	17q24.1	NA	NA	NA	NA	rs2074182	0.22	0.22	0.149	0.271565	0.1928	0.128	0.1239	0.6664	0.0716	0.15	0.06	0.13	0.6	0.1736	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.236317	NA	1	NA	NA	NA	0.297	NA	5.3002666
1122	14	35591174	35591174	T	C	UTR5	PPP2R3C	NM_017917:c.-9A>G	NA	NA	UTR5	ENSG00000092020,ENSG00000100890	ENST00000261475:c.-9A>G,ENST00000553273:c.-9A>G,ENST00000554222:c.-9A>G,ENST00000557217:c.-9A>G,ENST00000554899:c.-9A>G,ENST00000554265:c.-9A>G,ENST00000555630:c.-9A>G,ENST00000554488:c.-9A>G,ENST00000557288:c.-9A>G,ENST00000554563:c.-9A>G,ENST00000555644:c.-9A>G,ENST00000557278:c.-9A>G,ENST00000553282:c.-9A>G;ENST00000603611:c.-1278T>C	NA	NA	NA	NA	14q13.2	NA	Name=Ini1,YY1,STAT3,HDAC2_(SC-6296),ZNF263,Pol2-4H8,HA-E2F1,Sin3Ak-20,FOSL2,FOXA1_(C-20),THAP1_(SC-98174),Nrf1,TCF12,TBP,ZEB1_(SC-25388),HEY1,c-Myc,SRF,TCF4,Pol2,PU.1,SP1,TR4,YY1_(C-20),TAF7_(SQ-8),MafK_(SC-477),TAF1,ETS1,GABP,p300,ELF1_(SC-631),FOXA1_(SC-101058)	Name=148	NA	rs1056879	0.38	0.38	0.369	0.40635	0.3151	0.3909	0.3314	0.4894	0.4571	0.32	0.41	0.3	0.51	0.3717	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.18103	3.18103	NA	0.346628	0.446664	NA	0.406	NA	5.2999054
1122	12	57649840	57649840	C	T	exonic	R3HDM2	NA	synonymous SNV	R3HDM2:NM_014925:exon21:c.G2523A:p.K841K	exonic	ENSG00000179912	NA	synonymous SNV	ENSG00000179912:ENST00000548161:exon6:c.G759A:p.K253K,ENSG00000179912:ENST00000441731:exon12:c.G1608A:p.K536K,ENSG00000179912:ENST00000393811:exon13:c.G1704A:p.K568K,ENSG00000179912:ENST00000413953:exon13:c.G1704A:p.K568K,ENSG00000179912:ENST00000429355:exon14:c.G1818A:p.K606K,ENSG00000179912:ENST00000358907:exon21:c.G2523A:p.K841K,ENSG00000179912:ENST00000347140:exon23:c.G2523A:p.K841K,ENSG00000179912:ENST00000402412:exon23:c.G2565A:p.K855K,ENSG00000179912:ENST00000403821:exon23:c.G2625A:p.K875K	Score=628;Name=lod=477	NA	12q13.3	NA	NA	NA	NA	rs4075325	0.39	0.39	0.337	0.416334	0.4155	0.4405	0.5533	0.2284	0.5491	0.41	0.45	0.52	0.21	0.4875	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.642126	2.642126	NA	0.464186	0.281661	NA	0.319	NA	5.2994806
1122	17	8285398	8285398	T	C	intronic	RPL26	NA	NA	NA	intronic	ENSG00000161970,ENSG00000263809	NA	NA	NA	NA	NA	17p13.1	NA	Name=Pol2-4H8	Name=2	NA	rs422679	0.62	0.62	0.599	0.60643	0.7008	0.3552	0.7363	0.7337	0.5041	0.7	0.36	0.72	0.72	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.830096	NA	NA	NA	NA	NA	0.768	NA	5.2992
1122	11	4790482	4790482	T	C	exonic	OR51F1	NA	synonymous SNV	OR51F1:NM_001004752:exon1:c.A666G:p.L222L	exonic	ENSG00000188069	NA	synonymous SNV	ENSG00000188069:ENST00000343430:exon1:c.A666G:p.L222L,ENSG00000188069:ENST00000380383:exon1:c.A687G:p.L229L	NA	NA	11p15.4	NA	NA	NA	NA	rs12792898	0.07	0.07	0.059	0.0459265	0.1412	NA	0.0951	0.0061	0.0143	0.14	NA	0.13	0.0041	0.0919	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.064289	NA	NA	0.13483	0.031804	NA	0.116	NA	5.2987366
1122	17	66246416	66246416	A	G	exonic	AMZ2	NA	nonsynonymous SNV	AMZ2:NM_001033574:exon2:c.A88G:p.N30D,AMZ2:NM_016627:exon2:c.A88G:p.N30D,AMZ2:NM_001033569:exon3:c.A88G:p.N30D,AMZ2:NM_001033570:exon3:c.A88G:p.N30D,AMZ2:NM_001033571:exon3:c.A88G:p.N30D,AMZ2:NM_001033572:exon3:c.A88G:p.N30D	exonic	ENSG00000196704	NA	nonsynonymous SNV	ENSG00000196704:ENST00000577273:exon1:c.A88G:p.N30D,ENSG00000196704:ENST00000577985:exon1:c.A88G:p.N30D,ENSG00000196704:ENST00000359783:exon2:c.A88G:p.N30D,ENSG00000196704:ENST00000359904:exon2:c.A88G:p.N30D,ENSG00000196704:ENST00000392720:exon3:c.A88G:p.N30D,ENSG00000196704:ENST00000577866:exon3:c.A88G:p.N30D,ENSG00000196704:ENST00000579724:exon3:c.A88G:p.N30D,ENSG00000196704:ENST00000580548:exon3:c.A88G:p.N30D,ENSG00000196704:ENST00000580753:exon3:c.A88G:p.N30D,ENSG00000196704:ENST00000580837:exon3:c.A88G:p.N30D,ENSG00000196704:ENST00000584494:exon3:c.A88G:p.N30D	NA	NA	17q24.2	NA	NA	NA	NA	rs3213690	0.77	0.77	0.753	0.797923	0.6431	0.7619	0.8199	0.9705	0.7454	0.64	0.76	0.8	0.96	0.718	0.96	1	T	0.0	B	0.0	B	0.032	N	1.000	P	-1.95	N	2.42	T	-1.015	T	0.000	T	0.071	0.516	6.795	1.32	0.315	0.392	5.371	0.515707	NA	0.95	0.673605	0.924875	NA	0.703	NA	5.2986284
1122	6	137540335	137540335	C	T	intronic	IFNGR1	NA	NA	NA	intronic	ENSG00000027697	NA	NA	NA	NA	NA	6q23.3	NA	Name=Pol2,Pol2-4H8,Sin3Ak-20,CHD2_(N-1250)	Name=12	NA	rs11754268	0.24	0.24	0.203	0.294529	0.2306	0.4742	0.2133	0.0605	0.5491	0.23	0.43	0.22	0.07	0.2631	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.702868	1.702868	NA	0.207844	0.089738	NA	0.167	NA	5.298456
1122	5	35857235	35857235	C	G	intronic	IL7R	NA	NA	NA	intronic	ENSG00000168685	NA	NA	NA	NA	NA	5p13.2	NA	Name=EBF,JunD,BATF	Name=92	NA	rs1494561	0.65	0.65	0.635	0.647564	0.7018	0.4246	0.5562	0.9319	0.502	0.71	0.4	0.59	0.9	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.647477	NA	NA	NA	NA	NA	0.696	NA	5.2982
1122	21	43162150	43162150	G	A	exonic	RIPK4	NA	synonymous SNV	RIPK4:NM_020639:exon8:c.C1203T:p.G401G	exonic	ENSG00000183421	NA	synonymous SNV	ENSG00000183421:ENST00000332512:exon8:c.C1203T:p.G401G,ENSG00000183421:ENST00000542057:exon8:c.C1014T:p.G338G,ENSG00000183421:ENST00000544709:exon8:c.C1014T:p.G338G,ENSG00000183421:ENST00000352483:exon9:c.C1347T:p.G449G	Score=340;Name=lod=32	NA	21q22.3	NA	NA	NA	NA	rs3746894	0.47	0.47	0.432	0.440096	0.4811	0.5714	0.4654	0.2806	0.4601	0.48	0.59	0.49	0.28	0.4517	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.525963	NA	NA	0.435871	0.316674	NA	0.37	NA	5.2979956
1122	19	6731057	6731057	T	C	exonic	GPR108	NA	synonymous SNV	GPR108:NM_001080452:exon17:c.A1500G:p.G500G	exonic	ENSG00000125734	NA	synonymous SNV	ENSG00000125734:ENST00000594500:exon5:c.A276G:p.G92G,ENSG00000125734:ENST00000594034:exon6:c.A402G:p.G134G,ENSG00000125734:ENST00000264080:exon17:c.A1500G:p.G500G,ENSG00000125734:ENST00000430424:exon17:c.A774G:p.G258G	Score=560;Name=lod=252	NA	19p13.3	NA	Name=GR	NA	NA	rs2279624	0.75	0.75	0.757	0.741414	0.8181	0.6687	0.7536	0.82	0.6227	0.8	0.66	0.74	0.8	0.755	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.228246	NA	NA	0.795595	0.812197	NA	0.225	NA	5.2979716
1122	3	12112247	12112247	C	T	intronic	SYN2	NA	NA	NA	ncRNA_exonic	ENSG00000226642	NA	NA	NA	Score=858;Name=lod=4087	NA	3p25.2	NA	NA	NA	NA	rs12489177	0.12	0.12	0.122	0.109625	0.0358	0.1845	0.0432	0.1982	0.0358	0.04	0.22	0.04	0.18	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.958924	NA	NA	NA	NA	NA	0.072	NA	5.2975333
1122	18	61151659	61151659	G	T	UTR5	SERPINB5	NM_002639:c.-3G>T	NA	NA	UTR5	ENSG00000206075	ENST00000382771:c.-3G>T,ENST00000489441:c.-3G>T,ENST00000424602:c.-3G>T	NA	NA	NA	NA	18q21.33	NA	Name=Pol2(b)	NA	NA	rs77710366	0.02	0.02	0.016	0.0173722	0.0139	NA	0.0144	0.0325	0.0204	0.01	NA	0.02	0.04	0.0119	0.054	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.788003	2.788003	NA	0.010116	0.029505	NA	0.036	NA	5.2974174
1122	17	80159403	80159403	C	A	intronic	CCDC57	NA	NA	NA	intronic	ENSG00000176155	NA	NA	NA	NA	NA	17q25.3	NA	Name=ZNF263,Pol2	Name=6	NA	rs11657459	0.13	0.13	0.135	0.111022	0.1998	0.0565	0.1268	0.0552	0.1401	0.21	0.07	0.15	0.05	0.2843	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.840182	NA	NA	0.218669	0.09229	NA	0.145	NA	5.297231
1122	3	194379567	194379567	A	G	intronic	LSG1	NA	NA	NA	intronic	ENSG00000041802	NA	NA	NA	NA	NA	3q29	NA	Name=c-Jun,c-Fos	Name=19	NA	rs1675948	0.66	0.66	0.628	0.63758	0.7038	0.8651	0.6282	0.3366	0.7485	0.72	0.86	0.63	0.35	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.08977	NA	NA	NA	NA	NA	0.536	NA	5.2962
1122	8	10467576	10467576	T	C	exonic	RP1L1	NA	synonymous SNV	RP1L1:NM_178857:exon4:c.A4032G:p.T1344T	exonic	ENSG00000183638	NA	synonymous SNV	ENSG00000183638:ENST00000382483:exon4:c.A4032G:p.T1344T	NA	NA	8p23.1	NA	NA	NA	NA	rs4840499	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3705	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.096356	NA	NA	NA	NA	NA	0.261	NA	5.2961666
1122	11	4944892	4944892	G	C	exonic	OR51G1	NA	synonymous SNV	OR51G1:NM_001005237:exon1:c.C678G:p.T226T	exonic	ENSG00000176879	NA	synonymous SNV	ENSG00000176879:ENST00000321961:exon1:c.C678G:p.T226T	NA	NA	11p15.4	NA	NA	NA	NA	rs34583466	0.07	0.07	0.048	0.048722	0.1441	NA	0.0937	0.0136	0.0164	0.14	NA	0.13	0.02	0.0938	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.757475	NA	NA	0.13262	0.036801	NA	0.116	NA	5.2961466
1122	16	69350035	69350035	A	C	intronic	VPS4A	NA	NA	NA	intronic	ENSG00000132612,ENSG00000260914	NA	NA	NA	NA	NA	16q22.1	NA	Name=c-Myc,Max	Name=7	NA	rs3817030	0.2	0.2	0.199	0.208866	0.2336	0.0456	0.1801	0.3949	0.1207	0.22	0.05	0.2	0.36	0.2161	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.590053	NA	NA	0.254233	0.379302	NA	0.188	NA	5.296067
1122	1	166826752	166826752	A	G	UTR3	TADA1	NM_053053:c.*52T>C	NA	NA	UTR3	ENSG00000152382	ENST00000367874:c.*52T>C	NA	NA	NA	NA	1q24.1	Score=759;Name=V$MEF2_04	NA	NA	NA	rs34671474	0.01	0.01	0.005	0.00519169	0.0189	NA	0.0086	NA	0.001	0.02	NA	0.01	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.134544	NA	NA	0.018584	0.006849	NA	0.007	NA	5.2958494
1122	10	104184953	104184953	C	G	UTR5	CUEDC2	NM_024040:c.-8G>C	NA	NA	UTR5	ENSG00000107874	ENST00000369937:c.-8G>C	NA	NA	Score=259;Name=lod=15	NA	10q24.32	Score=862;Name=V$YY1_01	NA	NA	NA	rs11597439	0.26	0.26	0.226	0.284345	0.3559	0.1845	0.353	0.1362	0.4652	0.34	0.19	0.37	0.14	0.3433	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.838848	1.838848	NA	0.338584	0.149761	NA	0.312	NA	5.2955494
1122	4	154525458	154525458	C	T	exonic	KIAA0922	NA	synonymous SNV	KIAA0922:NM_001131007:exon25:c.C3294T:p.A1098A,KIAA0922:NM_015196:exon25:c.C3291T:p.A1097A	exonic	ENSG00000121210	NA	synonymous SNV	ENSG00000121210:ENST00000240487:exon19:c.C2625T:p.A875A,ENSG00000121210:ENST00000440693:exon23:c.C3042T:p.A1014A,ENSG00000121210:ENST00000409663:exon25:c.C3291T:p.A1097A,ENSG00000121210:ENST00000409959:exon25:c.C3294T:p.A1098A	NA	NA	4q31.3	NA	NA	NA	NA	rs1063151	0.16	0.16	0.143	0.16274	0.1153	0.3264	0.2248	0.0068	0.2096	0.11	0.33	0.19	0.01	0.1453	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.877342	NA	NA	0.110581	0.028143	ID=COSM1131221;OCCURENCE=1(prostate)	0.123	NA	5.2954856
1122	17	20013802	20013802	G	A	exonic	SPECC1	NA	synonymous SNV	SPECC1:NM_001033553:exon3:c.G210A:p.V70V,SPECC1:NM_001243439:exon3:c.G210A:p.V70V,SPECC1:NM_152904:exon3:c.G210A:p.V70V	exonic	ENSG00000128487	NA	synonymous SNV	ENSG00000128487:ENST00000261503:exon3:c.G210A:p.V70V,ENSG00000128487:ENST00000395527:exon3:c.G210A:p.V70V,ENSG00000128487:ENST00000395529:exon3:c.G210A:p.V70V,ENSG00000128487:ENST00000580934:exon3:c.G210A:p.V70V,ENSG00000128487:ENST00000581973:exon3:c.G210A:p.V70V,ENSG00000128487:ENST00000583463:exon4:c.G210A:p.V70V,ENSG00000128487:ENST00000583482:exon4:c.G210A:p.V70V,ENSG00000128487:ENST00000583528:exon5:c.G210A:p.V70V	NA	NA	17p11.2	NA	NA	NA	NA	rs3764436	0.1	0.1	0.078	0.108826	0.1223	0.0962	0.1369	0.0787	0.1288	0.13	0.09	0.12	0.07	0.1155	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.561107	NA	NA	0.133488	0.087835	NA	0.145	NA	5.2953786
1122	9	8389364	8389364	C	G	exonic	PTPRD	NA	synonymous SNV	PTPRD:NM_001171025:exon20:c.G3033C:p.G1011G,PTPRD:NM_130393:exon20:c.G3006C:p.G1002G,PTPRD:NM_001040712:exon21:c.G3024C:p.G1008G,PTPRD:NM_130391:exon22:c.G3033C:p.G1011G,PTPRD:NM_130392:exon22:c.G3036C:p.G1012G,PTPRD:NM_002839:exon37:c.G4254C:p.G1418G	exonic	ENSG00000153707	NA	synonymous SNV	ENSG00000153707:ENST00000397606:exon20:c.G3033C:p.G1011G,ENSG00000153707:ENST00000397617:exon20:c.G3033C:p.G1011G,ENSG00000153707:ENST00000537002:exon20:c.G3024C:p.G1008G,ENSG00000153707:ENST00000397611:exon21:c.G3024C:p.G1008G,ENSG00000153707:ENST00000355233:exon22:c.G3036C:p.G1012G,ENSG00000153707:ENST00000358503:exon22:c.G4188C:p.G1396G,ENSG00000153707:ENST00000486161:exon22:c.G3033C:p.G1011G,ENSG00000153707:ENST00000360074:exon23:c.G4215C:p.G1405G,ENSG00000153707:ENST00000356435:exon26:c.G4254C:p.G1418G,ENSG00000153707:ENST00000540109:exon26:c.G4254C:p.G1418G,ENSG00000153707:ENST00000381196:exon34:c.G4254C:p.G1418G	Score=628;Name=lod=476	NA	9p24.1	NA	NA	NA	NA	rs2279776	0.53	0.53	0.529	0.55631	0.4354	0.6329	0.451	0.6195	0.591	0.44	0.6	0.45	0.64	0.4992	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.781699	NA	NA	0.43686	0.578075	NA	0.471	NA	5.2952066
1122	16	69350069	69350069	C	G	intronic	VPS4A	NA	NA	NA	intronic	ENSG00000132612,ENSG00000260914	NA	NA	NA	NA	NA	16q22.1	NA	Name=Max,c-Myc	Name=7	NA	rs12708896	0.2	0.2	0.223	0.208866	0.2336	0.0456	0.1801	0.3949	0.1207	0.22	0.05	0.2	0.36	0.2162	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.997222	NA	NA	0.255196	0.37982	NA	0.188	NA	5.295004
1123	6	160514541	160514541	T	C	ncRNA_exonic	LOC729603	NA	NA	NA	ncRNA_exonic	ENSG00000213073	NA	NA	NA	Score=651;Name=lod=588	NA	6q25.3	NA	NA	NA	NA	rs1888727	0.51	0.51	0.508	0.528155	0.3718	0.6954	0.4352	0.6074	0.4755	0.37	0.71	0.42	0.56	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.171961	NA	NA	NA	NA	NA	0.543	NA	5.2948666
1123	15	85483991	85483991	A	C	intronic	SLC28A1	NA	NA	NA	ncRNA_exonic	ENSG00000271044	NA	NA	NA	Score=707;Name=lod=993	NA	15q25.3	NA	NA	NA	NA	rs117679923	0.02	0.02	0.019	0.0159744	0.0388	NA	0.0072	0.0008	0.0358	0.04	NA	0.01	0.002	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.206262	NA	NA	NA	NA	NA	NA	NA	5.2945333
1123	11	18487305	18487305	C	G	exonic	LDHAL6A	NA	synonymous SNV	LDHAL6A:NM_144972:exon3:c.C366G:p.P122P,LDHAL6A:NM_001144071:exon4:c.C366G:p.P122P	exonic	ENSG00000166800	NA	synonymous SNV	ENSG00000166800:ENST00000280706:exon3:c.C366G:p.P122P,ENSG00000166800:ENST00000396213:exon4:c.C366G:p.P122P	NA	NA	11p15.1	NA	NA	NA	NA	rs17851143	0.09	0.09	0.063	0.0874601	0.1233	0.0615	0.1268	0.0545	0.0941	0.11	0.05	0.12	0.07	0.1147	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.25827	NA	NA	0.134288	0.072078	ID=COSM1179747;OCCURENCE=1(prostate)	0.109	NA	5.2943786
1123	10	50901938	50901938	C	T	exonic	C10orf53	NA	synonymous SNV	C10orf53:NM_001042427:exon2:c.C216T:p.F72F,C10orf53:NM_182554:exon2:c.C216T:p.F72F	exonic	ENSG00000178645	NA	synonymous SNV	ENSG00000178645:ENST00000374111:exon2:c.C216T:p.F72F,ENSG00000178645:ENST00000374112:exon2:c.C216T:p.F72F,ENSG00000178645:ENST00000374113:exon2:c.C216T:p.F72F,ENSG00000178645:ENST00000535836:exon2:c.C216T:p.F72F	Score=395;Name=lod=54	NA	10q11.23	NA	NA	NA	NA	rs1133837	0.37	0.37	0.375	0.353035	0.4761	0.1389	0.3732	0.3707	0.409	0.5	0.16	0.36	0.4	0.4257	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.674891	1.674891	NA	0.471279	0.38039	NA	0.486	NA	5.2935876
1123	5	94050487	94050487	T	A	exonic	MCTP1	NA	synonymous SNV	MCTP1:NM_001002796:exon20:c.A2052T:p.I684I,MCTP1:NM_024717:exon20:c.A2715T:p.I905I	exonic	ENSG00000175471	NA	synonymous SNV	ENSG00000175471:ENST00000505078:exon13:c.A1263T:p.I421I,ENSG00000175471:ENST00000429576:exon17:c.A1794T:p.I598I,ENSG00000175471:ENST00000508509:exon17:c.A1875T:p.I625I,ENSG00000175471:ENST00000312216:exon20:c.A2052T:p.I684I,ENSG00000175471:ENST00000515393:exon20:c.A2715T:p.I905I	Score=685;Name=lod=807	NA	5q15	NA	NA	NA	NA	rs2636	0.41	0.41	0.363	0.396965	0.4662	0.4345	0.4827	0.1853	0.5123	0.47	0.44	0.52	0.21	0.4512	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.392219	1.392219	NA	0.455698	0.233772	NA	0.399	NA	5.2935686
1123	3	57557834	57557834	A	G	UTR3	ARF4	NM_001660:c.*105T>C	NA	NA	UTR3	ENSG00000168374	ENST00000303436:c.*105T>C,ENST00000496292:c.*105T>C,ENST00000489843:c.*105T>C,ENST00000486310:c.*493T>C	NA	NA	Score=750;Name=lod=1486	NA	3p14.3	NA	NA	NA	NA	rs11964	0.02	0.02	0.016	0.0151757	0.0398	NA	0.0259	0.0023	0.0153	0.04	NA	0.02	0.002	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.472889	1.472889	NA	NA	NA	NA	0.022	NA	5.2935334
1123	1	109806834	109806834	C	T	exonic	CELSR2	NA	synonymous SNV	CELSR2:NM_001408:exon10:c.C5136T:p.P1712P	exonic	ENSG00000143126	NA	synonymous SNV	ENSG00000143126:ENST00000271332:exon10:c.C5136T:p.P1712P	Score=470;Name=lod=108	NA	1p13.3	NA	NA	NA	NA	rs6698843	0.39	0.39	0.456	0.353435	0.4751	0.498	0.4654	0.0764	0.3742	0.46	0.51	0.49	0.08	0.4312	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.025012	NA	NA	0.466977	0.133227	NA	0.326	NA	5.2933896
1123	1	161577657	161577657	G	A	ncRNA_exonic	HSPA7	NA	NA	NA	ncRNA_exonic	ENSG00000225217	NA	NA	NA	Score=790;Name=lod=2164	NA	1q23.3	NA	NA	NA	NA	rs61802306	0.24	0.24	0.28	0.286142	0.3738	0.2728	0.2925	0.2375	0.271	0.31	0.23	0.24	0.16	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.218408	NA	NA	NA	NA	NA	0.304	NA	5.2928666
1123	10	134997480	134997480	C	T	exonic	KNDC1	NA	synonymous SNV	KNDC1:NM_152643:exon5:c.C612T:p.F204F	exonic	ENSG00000171798	NA	synonymous SNV	ENSG00000171798:ENST00000368571:exon4:c.C417T:p.F139F,ENSG00000171798:ENST00000304613:exon5:c.C612T:p.F204F,ENSG00000171798:ENST00000368572:exon5:c.C612T:p.F204F	Score=462;Name=lod=101	NA	10q26.3	NA	NA	NA	NA	rs57510763	0.4	0.4	0.372	0.419529	0.4384	0.5843	0.3876	0.118	0.6605	0.46	0.59	0.38	0.11	0.4673	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.635864	NA	NA	0.468256	0.167272	NA	0.341	NA	5.2927106
1123	5	178391902	178391902	A	C	exonic	ZNF454	NA	nonsynonymous SNV	ZNF454:NM_001178089:exon5:c.A497C:p.D166A,ZNF454:NM_001178090:exon5:c.A497C:p.D166A,ZNF454:NM_182594:exon5:c.A497C:p.D166A	exonic	ENSG00000178187	NA	nonsynonymous SNV	ENSG00000178187:ENST00000320129:exon5:c.A497C:p.D166A,ENSG00000178187:ENST00000519564:exon5:c.A497C:p.D166A	NA	NA	5q35.3	NA	NA	NA	NA	rs12719860	0.67	0.67	0.665	0.660144	0.6869	0.6597	0.6931	0.6437	0.6319	0.68	0.64	0.71	0.65	0.6721	0.71	0.54	T	0.0	B	0.0	B	0.000	N	1.000	P	0	N	3.22	T	-0.970	T	0.000	T	0.043	-1.004	0.255	0.689	0.063	-0.173	0.826	-1.003612	NA	0.77	0.682209	0.640036	NA	0.717	NA	5.2921244
1123	22	30683285	30683285	C	G	intronic	GATSL3	NA	NA	NA	intronic	ENSG00000239282,ENSG00000248751	NA	NA	NA	NA	NA	22q12.2	NA	Name=E2F6,CTCF	Name=9	NA	rs5753058	0.18	0.18	0.194	0.158347	0.2535	0.1448	0.1614	0.1346	0.1043	0.24	0.12	0.17	0.15	0.2015	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.466792	1.466792	NA	0.253215	0.148157	NA	0.268	NA	5.291785
1123	19	50475259	50475259	G	C	ncRNA_intronic	SIGLEC16	NA	NA	NA	ncRNA_exonic	ENSG00000161643	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs12463036	0.22	0.22	0.215	0.194888	0.1789	0.3304	0.1571	0.1717	0.1299	0.18	0.32	0.18	0.2	0.1965	0.32	0.11	T	.	.	.	.	0.072	N	1.000	P	.	.	.	.	-1.017	T	0.000	T	.	2.133	13.09	-0.398	-0.015	0.323	4.022	2.132987	2.132987	0.04	NA	NA	NA	0.152	NA	5.2912666
1123	16	3304762	3304762	A	G	exonic	MEFV	NA	synonymous SNV	MEFV:NM_000243:exon2:c.T306C:p.D102D	exonic	ENSG00000103313	NA	synonymous SNV	ENSG00000103313:ENST00000219596:exon2:c.T306C:p.D102D,ENSG00000103313:ENST00000537682:exon2:c.T306C:p.D102D,ENSG00000103313:ENST00000538326:exon2:c.T306C:p.D102D,ENSG00000103313:ENST00000542898:exon2:c.T306C:p.D102D,ENSG00000103313:ENST00000570511:exon2:c.T306C:p.D102D	NA	NA	16p13.3	NA	NA	NA	NA	rs224225	0.42	0.42	0.39	0.389377	0.4732	0.1577	0.5937	0.5265	0.2117	0.47	0.18	0.57	0.54	0.4382	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.096509	NA	NA	0.464008	0.500462	ID=COSM435205;OCCURENCE=1(breast)	0.391	CLINSIG=non-pathogenic;CLNDBN=Familial_Mediterranean_fever;CLNREVSTAT=single;CLNACC=RCV000030182.1;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet:SNOMED_CT;CLNDSDBID=NBK1227:C0031069:249100:ORPHA342:12579009	5.2912586
1123	11	6292065	6292065	C	A	intronic	CCKBR	NA	NA	NA	exonic	ENSG00000110148	NA	synonymous SNV	ENSG00000110148:ENST00000525462:exon4:c.C843A:p.G281G	NA	NA	11p15.4	NA	Name=USF-1	NA	NA	rs1800843	0.14	0.14	0.123	0.154553	0.1839	0.0228	0.1628	0.2315	0.1503	0.17	0.03	0.17	0.2	0.1633	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.843527	NA	NA	0.195414	0.210586	NA	0.123	NA	5.2907193
1123	10	32800595	32800595	A	G	intronic	CCDC7	NA	NA	NA	ncRNA_exonic	ENSG00000231245	NA	NA	NA	Score=598;Name=lod=359	NA	10p11.22	NA	NA	NA	NA	rs138607647	0.03	0.03	0.016	0.0247604	0.0427	NA	0.0173	0.034	0.0245	0.04	NA	0.02	0.03	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.78608	1.78608	NA	NA	NA	NA	NA	NA	5.2906333
1123	19	39361658	39361658	G	C	intronic	RINL	NA	NA	NA	ncRNA_intronic	ENSG00000269050	NA	NA	NA	NA	NA	19q13.2	NA	Name=ZNF263	Name=3	NA	rs8100220	0.43	0.43	0.41	0.401757	0.3211	0.619	0.464	0.3873	0.2362	0.32	0.59	0.46	0.4	0.3801	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.938992	NA	NA	0.341512	0.372674	NA	0.312	NA	5.2906213
1123	3	186570892	186570892	T	G	exonic	ADIPOQ	NA	synonymous SNV	ADIPOQ:NM_004797:exon2:c.T45G:p.G15G,ADIPOQ:NM_001177800:exon3:c.T45G:p.G15G	exonic	ENSG00000181092	NA	synonymous SNV	ENSG00000181092:ENST00000320741:exon2:c.T45G:p.G15G,ENSG00000181092:ENST00000412955:exon2:c.T45G:p.G15G,ENSG00000181092:ENST00000444204:exon3:c.T45G:p.G15G	NA	NA	3q27.3	NA	NA	NA	NA	rs2241766	0.14	0.14	0.119	0.151358	0.1322	0.2986	0.1859	0.0356	0.1513	0.11	0.28	0.17	0.02	0.1289	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.545615	NA	NA	0.115233	0.048116	NA	0.043	NA	5.2903336
1123	1	9009470	9009470	G	C	exonic	CA6	NA	synonymous SNV	CA6:NM_001215:exon2:c.G228C:p.G76G,CA6:NM_001270500:exon2:c.G228C:p.G76G	exonic	ENSG00000131686	NA	synonymous SNV	ENSG00000131686:ENST00000319474:exon2:c.G228C:p.G76G,ENSG00000131686:ENST00000377436:exon2:c.G228C:p.G76G,ENSG00000131686:ENST00000377443:exon2:c.G228C:p.G76G,ENSG00000131686:ENST00000480186:exon2:c.G228C:p.G76G	NA	NA	1p36.23	NA	NA	NA	NA	rs2274330	0.23	0.23	0.244	0.262181	0.1213	0.1647	0.1037	0.5946	0.1708	0.12	0.17	0.11	0.57	0.1454	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.070819	NA	NA	0.109884	0.492056	NA	0.304	NA	5.2900826
1123	1	111862136	111862136	C	G	intronic	CHIA	NA	NA	NA	ncRNA_intronic	ENSG00000229283	NA	NA	NA	NA	NA	1p13.2	NA	Name=NFKB,MEF2A	NA	NA	rs114909116	0.01	0.01	0.004	0.00678914	0.0189	NA	0.0159	NA	0.0041	0.01	NA	0.02	NA	0.0105	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.109228	NA	NA	0.014419	0.002724	NA	NA	NA	5.2895143
1123	11	103780455	103780455	A	G	exonic	PDGFD	NA	synonymous SNV	PDGFD:NM_025208:exon7:c.T1080C:p.C360C,PDGFD:NM_033135:exon7:c.T1062C:p.C354C	exonic	ENSG00000170962	NA	synonymous SNV	ENSG00000170962:ENST00000302251:exon7:c.T1062C:p.C354C,ENSG00000170962:ENST00000393158:exon7:c.T1080C:p.C360C	NA	NA	11q22.3	Score=680;Name=V$PPARG_02	NA	NA	NA	rs10791649	0.47	0.47	0.462	0.461462	0.4523	0.4603	0.3487	0.5106	0.4857	0.44	0.5	0.39	0.54	0.4464	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.771922	NA	NA	0.478832	0.481381	NA	0.377	NA	5.2891346
1123	6	33095801	33095801	C	T	ncRNA_exonic	HLA-DPB2	NA	NA	NA	ncRNA_exonic	ENSG00000224557	NA	NA	NA	Score=513;Name=lod=162	NA	6p21.32	NA	NA	NA	NA	rs3129273	0.35	0.35	0.33	0.366014	0.3777	0.4901	0.3444	0.1876	0.4826	0.36	0.51	0.31	0.18	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.242656	NA	NA	NA	NA	NA	0.312	NA	5.2889666
1123	6	33095836	33095836	G	A	ncRNA_exonic	HLA-DPB2	NA	NA	NA	ncRNA_exonic	ENSG00000224557	NA	NA	NA	Score=513;Name=lod=162	NA	6p21.32	NA	NA	NA	NA	rs3117011	0.35	0.35	0.33	0.369609	0.3777	0.4901	0.3458	0.2005	0.4826	0.36	0.51	0.31	0.19	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.025292	NA	NA	NA	NA	NA	0.319	NA	5.2889666
1123	7	37960835	37960835	G	A	intronic	EPDR1	NA	NA	NA	intronic	ENSG00000086289,ENSG00000106483	NA	NA	NA	NA	NA	7p14.1	NA	Name=p300,E2F6,Pol2,ZNF263,HA-E2F1,Ini1	Name=74	NA	rs13240429	0.26	0.26	0.233	0.234425	0.2396	0.2252	0.219	0.264	0.2096	0.25	0.23	0.24	0.34	0.2565	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.370992	1.370992	NA	0.215186	0.224055	NA	0.13	NA	5.288714
1123	1	89295015	89295015	C	T	intronic	PKN2	NA	NA	NA	ncRNA_exonic	ENSG00000241975	NA	NA	NA	Score=698;Name=lod=918	NA	1p22.2	NA	NA	NA	NA	rs3767387	0.11	0.11	0.125	0.132987	0.0447	0.0337	0.0476	0.3601	0.0798	0.05	0.04	0.05	0.34	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.134607	NA	NA	NA	NA	NA	0.188	NA	5.2886333
1123	6	116360766	116360766	C	G	ncRNA_exonic	TPI1P3	NA	NA	NA	intronic	ENSG00000111816	NA	NA	NA	Score=336;Name=lod=31	NA	6q22.1	NA	NA	NA	NA	rs77427140	0.06	0.06	0.032	0.0445288	0.0447	0.0278	0.1671	0.0061	0.0266	0.05	0.04	0.17	0.01	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.910958	NA	NA	NA	NA	NA	0.022	NA	5.2886333
1123	17	16593798	16593798	C	T	exonic	CCDC144A	NA	synonymous SNV	CCDC144A:NM_014695:exon1:c.C84T:p.S28S	exonic	ENSG00000170160,ENSG00000266302	NA	synonymous SNV	ENSG00000170160:ENST00000340621:exon1:c.C84T:p.S28S,ENSG00000170160:ENST00000360495:exon1:c.C84T:p.S28S,ENSG00000170160:ENST00000360524:exon1:c.C84T:p.S28S,ENSG00000170160:ENST00000399273:exon1:c.C84T:p.S28S,ENSG00000170160:ENST00000443444:exon1:c.C84T:p.S28S,ENSG00000266302:ENST00000448331:exon1:c.C84T:p.S28S,ENSG00000170160:ENST00000456009:exon1:c.C84T:p.S28S	NA	NA	17p11.2	NA	NA	NA	NA	rs2349265	0.07	0.07	0.058	0.053115	0.1571	NA	0.0865	0.0159	0.0276	0.15	NA	0.08	0.01	0.0928	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.261845	NA	NA	0.128488	0.031548	NA	0.029	NA	5.2882786
1123	6	40996381	40996381	G	A	intronic	UNC5CL	NA	NA	NA	intronic	ENSG00000124602	NA	NA	NA	NA	NA	6p21.1	NA	Name=TAF1,Pol2-4H8	Name=141	NA	rs742492	0.23	0.23	0.211	0.276757	0.2038	0.2798	0.268	0.2383	0.407	0.21	0.27	0.25	0.19	0.2787	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.921727	NA	NA	0.229316	0.223109	NA	0.145	NA	5.288184
1123	14	64897018	64897018	C	A	intronic	MTHFD1	NA	NA	NA	ncRNA_intronic	ENSG00000258824	NA	NA	NA	NA	NA	14q23.3	NA	Name=SMC3_(ab9263),Rad21,CTCF	NA	NA	rs59096477	0.05	0.05	0.057	0.0593051	0.0229	0.0139	0.0288	0.1747	0.0092	0.02	0.01	0.02	0.15	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.124356	NA	NA	0.022627	0.157514	NA	0.072	NA	5.2878063
1123	20	1616206	1616206	A	G	exonic	SIRPG	NA	nonsynonymous SNV	SIRPG:NM_018556:exon4:c.T788C:p.V263A	exonic	ENSG00000089012	NA	nonsynonymous SNV	ENSG00000089012:ENST00000303415:exon4:c.T788C:p.V263A,ENSG00000089012:ENST00000381580:exon4:c.T689C:p.V230A	NA	NA	20p13	NA	NA	NA	NA	rs6043409	0.76	0.76	0.745	0.797125	0.66	0.8482	0.7824	0.8253	0.8579	0.67	0.84	0.74	0.84	0.7296	0.85	1	T	0.0	B	0.001	B	0.033	N	1.000	P	-1.215	N	6.24	T	-0.985	T	0.000	T	0.016	-1.973	0.007	-0.896	-0.747	0.362	0.487	-1.973249	NA	1	0.656047	0.802088	NA	0.761	NA	5.2876864
1123	2	112698460	112698460	G	A	intronic	MERTK	NA	NA	NA	ncRNA_exonic	ENSG00000225496	NA	NA	NA	Score=616;Name=lod=424	NA	2q13	NA	NA	NA	NA	rs10165614	0.05	0.05	0.055	0.0503195	0.0457	0.002	0.0389	0.121	0.0174	0.05	NA	0.05	0.13	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.980314	1.980314	NA	NA	NA	NA	0.109	NA	5.2876333
1123	20	12990057	12990057	T	A	intronic	SPTLC3	NA	NA	NA	intronic	ENSG00000172296	NA	NA	NA	NA	NA	20p12.1	NA	Name=CTCF,Rad21	Name=83	NA	rs3761894	0.21	0.21	0.18	0.222045	0.2197	0.254	0.2522	0.0454	0.409	0.23	0.33	0.21	0.03	0.2528	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.851116	NA	NA	0.240233	0.076941	NA	0.152	NA	5.287267
1123	3	125826213	125826213	C	T	ncRNA_intronic	ALDH1L1-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000250218	NA	NA	NA	NA	NA	3q21.3	NA	NA	Name=3	NA	rs2276730	0.32	0.32	0.346	0.316294	0.3797	0.1825	0.2939	0.407	0.2822	0.38	0.19	0.28	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.516371	NA	NA	NA	NA	NA	0.261	NA	5.2869666
1123	11	75353891	75353891	C	A	intronic	MAP6	NA	NA	NA	ncRNA_exonic	ENSG00000255280	NA	NA	NA	NA	NA	11q13.5	NA	Name=MafK_(ab50322)	NA	NA	rs80339693	0.03	0.03	0.026	0.0313498	0.0467	0.0288	0.0288	0.003	0.0583	0.05	0.02	0.03	0.002	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.514587	NA	NA	NA	NA	NA	0.08	NA	5.2866333
1123	13	41567564	41567564	C	A	intronic	ELF1	NA	NA	NA	intronic	ENSG00000120690	NA	NA	NA	Score=340;Name=lod=32	NA	13q14.11	NA	NA	Name=24	NA	rs35073784	0.46	0.46	0.419	0.432508	0.7137	0.1696	0.6614	0.1876	0.5828	0.73	0.18	0.63	0.22	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.462498	NA	NA	NA	NA	NA	0.5	NA	5.2863
1123	13	113770068	113770068	C	T	exonic	F7	NA	synonymous SNV	F7:NM_001267554:exon3:c.C273T:p.H91H,F7:NM_019616:exon5:c.C459T:p.H153H,F7:NM_000131:exon6:c.C525T:p.H175H	exonic	ENSG00000057593	NA	synonymous SNV	ENSG00000057593:ENST00000541084:exon3:c.C318T:p.H106H,ENSG00000057593:ENST00000346342:exon5:c.C459T:p.H153H,ENSG00000057593:ENST00000375581:exon6:c.C525T:p.H175H	NA	NA	13q34	NA	NA	NA	NA	rs6042	0.1	0.1	0.123	0.145567	0.1213	0.0446	0.1282	0.1346	0.3016	0.11	0.05	0.12	0.13	0.1419	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.062413	NA	NA	0.117209	0.133908	ID=COSM432148;OCCURENCE=1(breast)	0.072	NA	5.2862576
1123	2	71190384	71190384	C	T	exonic	ATP6V1B1	NA	synonymous SNV	ATP6V1B1:NM_001692:exon10:c.C1002T:p.R334R	exonic	ENSG00000116039	NA	synonymous SNV	ENSG00000116039:ENST00000234396:exon10:c.C1002T:p.R334R,ENSG00000116039:ENST00000412314:exon10:c.C1002T:p.R334R	NA	NA	2p13.3	NA	NA	NA	NA	rs2072462	0.44	0.44	0.445	0.4375	0.4622	0.6548	0.4928	0.146	0.5429	0.46	0.63	0.49	0.16	0.469	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.01767	NA	NA	0.449419	0.180436	NA	0.42	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000037201.1;CLNDSDB=.;CLNDSDBID=.	5.2860476
1123	8	1038898	1038898	C	T	ncRNA_intronic	ERICH1-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000237647	NA	NA	NA	Score=329;Name=lod=29	NA	8p23.3	NA	NA	NA	NA	rs7834653	0.26	0.26	0.222	0.251797	0.3807	0.0853	0.379	0.1687	0.3129	0.39	0.08	0.34	0.19	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.423569	NA	NA	NA	NA	NA	0.022	NA	5.2859666
1123	1	204198209	204198209	A	G	exonic	PLEKHA6	NA	synonymous SNV	PLEKHA6:NM_014935:exon19:c.T2607C:p.H869H	exonic	ENSG00000143850	NA	synonymous SNV	ENSG00000143850:ENST00000272203:exon19:c.T2607C:p.H869H,ENSG00000143850:ENST00000414478:exon19:c.T2667C:p.H889H	Score=573;Name=lod=283	NA	1q32.1	NA	NA	NA	NA	rs3795571	0.52	0.52	0.519	0.51238	0.4344	0.4802	0.5389	0.6967	0.3579	0.44	0.48	0.54	0.68	0.4885	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.139292	NA	NA	0.457907	0.660917	NA	0.609	NA	5.2858596
1123	15	35693391	35693391	C	A	intronic	ATPBD4	NA	NA	NA	ncRNA_exonic	ENSG00000259411	NA	NA	NA	Score=665;Name=lod=674	NA	15q14	NA	NA	NA	NA	rs143901427	0.02	0.02	0.015	0.0129792	0.0477	NA	0.0101	0.0008	0.0092	0.05	NA	0.02	0.002	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.978759	NA	NA	NA	NA	NA	NA	NA	5.2856333
1123	2	30381505	30381505	T	C	exonic	YPEL5	NA	synonymous SNV	YPEL5:NM_016061:exon3:c.T162C:p.S54S,YPEL5:NM_001127399:exon4:c.T162C:p.S54S,YPEL5:NM_001127400:exon4:c.T162C:p.S54S,YPEL5:NM_001127401:exon5:c.T162C:p.S54S	exonic	ENSG00000119801	NA	synonymous SNV	ENSG00000119801:ENST00000261353:exon3:c.T162C:p.S54S,ENSG00000119801:ENST00000379519:exon4:c.T162C:p.S54S,ENSG00000119801:ENST00000402003:exon4:c.T162C:p.S54S,ENSG00000119801:ENST00000402708:exon4:c.T162C:p.S54S,ENSG00000119801:ENST00000379520:exon5:c.T162C:p.S54S	Score=737;Name=lod=1316	NA	2p23.1	NA	NA	NA	NA	rs1137288	0.49	0.49	0.475	0.46885	0.4503	0.7401	0.4135	0.2776	0.5061	0.46	0.75	0.42	0.3	0.4619	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.543642	NA	NA	0.468837	0.33409	NA	0.486	NA	5.2856296
1123	6	14118138	14118138	C	G	intronic	CD83	NA	NA	NA	intronic	ENSG00000112149	NA	NA	NA	NA	NA	6p23	NA	Name=NFKB,ZBTB7A_(SC-34508),Oct-2,PAX5-N19,CTCF,TAF1,POU2F2,YY1,TCF4,Pol2,E2F6,Pol2-4H8,HA-E2F1,YY1_(C-20)	Name=91	NA	rs2235368	0.27	0.27	0.251	0.28155	0.2286	0.1389	0.3343	0.5234	0.1186	0.22	0.11	0.33	0.47	0.2957	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.520329	NA	NA	0.190179	0.446731	NA	0.297	NA	5.285521
1123	5	140773388	140773388	G	T	exonic	PCDHGA8	NA	synonymous SNV	PCDHGA8:NM_014004:exon1:c.G1008T:p.S336S,PCDHGA8:NM_032088:exon1:c.G1008T:p.S336S	exonic	ENSG00000253767	NA	synonymous SNV	ENSG00000253767:ENST00000398604:exon1:c.G1008T:p.S336S	NA	NA	5q31.3	NA	NA	NA	NA	rs2240700	0.18	0.18	0.175	0.202077	0.1014	0.1548	0.1902	0.3169	0.2076	0.11	0.17	0.18	0.32	0.1577	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.005347	NA	NA	0.122442	0.315124	NA	0.188	NA	5.2851246
1124	1	35816430	35816430	A	G	intronic	ZMYM4	NA	NA	NA	ncRNA_exonic	ENSG00000229994	NA	NA	NA	Score=780;Name=lod=1972	NA	1p34.3	NA	NA	NA	NA	rs1927651	0.42	0.42	0.39	0.429113	0.0487	0.7649	0.3674	0.6331	0.2423	0.04	0.8	0.33	0.62	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.029371	NA	NA	NA	NA	NA	0.283	NA	5.2846333
1124	10	102008477	102008477	C	T	intronic	CWF19L1	NA	NA	NA	ncRNA_exonic	ENSG00000230224	NA	NA	NA	Score=783;Name=lod=2026	NA	10q24.31	NA	NA	NA	NA	rs7082884	0.08	0.08	0.07	0.0934505	0.0487	0.0615	0.0548	0.1725	0.093	0.05	0.07	0.06	0.13	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.169271	NA	NA	NA	NA	NA	0.058	NA	5.2846333
1124	3	3886847	3886847	G	C	exonic	LRRN1	NA	synonymous SNV	LRRN1:NM_020873:exon2:c.G522C:p.L174L	exonic	ENSG00000175928	NA	synonymous SNV	ENSG00000175928:ENST00000319331:exon2:c.G522C:p.L174L	NA	NA	3p26.2	NA	NA	NA	NA	rs3749349	0.21	0.21	0.233	0.213658	0.1044	0.2679	0.147	0.295	0.2076	0.1	0.28	0.15	0.33	0.1542	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.155738	NA	NA	0.123605	0.236042	NA	0.217	NA	5.2844616
1124	14	21699069	21699069	A	C	intronic	HNRNPC	NA	NA	NA	intronic	ENSG00000092199	NA	NA	NA	Score=721;Name=lod=1133	NA	14q11.2	Score=785;Name=V$SRF_01	NA	NA	NA	rs8016099	0.22	0.22	0.206	0.226837	0.2177	0.3026	0.3285	0.0711	0.2965	0.21	0.33	0.28	0.08	0.2592	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.221988	4.221988	NA	0.238677	0.097727	NA	0.203	NA	5.284423
1124	6	2838046	2838046	A	G	intronic	SERPINB1	NA	NA	NA	intronic	ENSG00000021355	NA	NA	NA	NA	NA	6p25.2	NA	Name=HNF4A_(H-171),NRSF,Pol2	Name=10	NA	rs316339	0.71	0.71	0.68	0.72524	0.7157	0.744	0.7968	0.6657	0.7454	0.71	0.73	0.78	0.62	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.014735	NA	NA	NA	NA	NA	0.703	NA	5.2843
1124	6	4703918	4703918	C	T	intergenic	ECI2,CDYL	dist=568087;dist=72762	NA	NA	ncRNA_exonic	ENSG00000217385	NA	NA	NA	Score=845;Name=lod=3619	NA	6p25.1	NA	NA	Name=13	NA	rs6932055	0.73	0.73	0.745	0.746805	0.7157	0.6647	0.634	0.9039	0.7311	0.7	0.67	0.65	0.9	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.774001	NA	NA	NA	NA	NA	0.688	NA	5.2843
1124	15	78189544	78189544	C	T	intergenic	LOC253044,LOC645752	dist=247963;dist=17015	NA	NA	ncRNA_exonic	ENSG00000260139	NA	NA	NA	Score=505;Name=lod=151	NA	15q24.3	Score=944;Name=V$USF_C	NA	NA	NA	rs4335744	0.62	0.62	0.469	0.620607	0.7157	0.63	0.5605	0.6377	0.5327	0.68	0.58	0.57	0.63	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.323395	NA	NA	NA	NA	NA	0.572	NA	5.2843
1124	1	16948473	16948473	C	T	ncRNA_intronic	CROCCP2	NA	NA	NA	ncRNA_intronic	ENSG00000215908	NA	NA	NA	Score=500;Name=lod=143	NA	1p36.13	NA	NA	NA	NA	rs446948	NA	NA	0.393	0.383187	0.3837	0.3938	0.4164	0.3109	0.4458	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.713148	NA	NA	NA	NA	NA	NA	NA	5.2829666
1124	3	24001078	24001078	C	T	intronic	NR1D2	NA	NA	NA	intronic	ENSG00000174738	NA	NA	NA	NA	NA	3p24.2	NA	Name=USF-1,p300_(N-15),GR,STAT3,c-Fos,c-Jun,JunD,FOXA1_(C-20)	Name=120	NA	rs4321479	0.69	0.69	0.676	0.741414	0.7177	0.4931	0.8228	0.8381	0.8333	0.71	0.49	0.8	0.83	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.887205	NA	NA	NA	NA	NA	0.71	NA	5.2823
1124	19	53959343	53959343	G	A	exonic	ZNF761	NA	nonsynonymous SNV	ZNF761:NM_001008401:exon7:c.G1582A:p.G528S	ncRNA_exonic	ENSG00000160336	NA	NA	NA	Score=265;Name=lod=16	NA	19q13.42	NA	NA	NA	NA	rs2708742	0.36	0.36	0.322	0.363419	0.3956	0.2401	0.5303	0.3306	0.3834	0.39	0.25	0.53	0.29	0.4161	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.080067	NA	0.06	0.406047	0.339991	NA	0.348	NA	5.282253
1124	6	159205668	159205668	G	A	intronic	EZR	NA	NA	NA	intronic	ENSG00000092820	NA	NA	NA	Score=489;Name=lod=130	NA	6q25.3	NA	Name=GR,Pol2-4H8,c-Jun,Pol2(b)	Name=68	NA	rs3103003	0.42	0.42	0.422	0.419129	0.6024	0.2054	0.3559	0.407	0.5123	0.61	0.17	0.42	0.42	0.5112	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.26876	NA	NA	0.604419	0.459374	NA	0.449	NA	5.281981
1124	11	117988539	117988539	G	A	intronic	TMPRSS4	NA	NA	NA	intronic	ENSG00000137648	NA	NA	NA	NA	NA	11q23.3	NA	Name=NFKB	Name=5	NA	rs671111	0.32	0.32	0.297	0.284345	0.3618	0.2639	0.3285	0.2489	0.2423	0.37	0.26	0.38	0.26	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.70319	NA	NA	0.35638	0.266618	NA	0.341	NA	5.28182
1124	16	66547767	66547767	T	C	intronic	TK2	NA	NA	NA	splicing	ENSG00000166548	ENST00000564917:exon10:c.619-2A>G	NA	NA	NA	NA	16q21	NA	NA	Name=7	NA	rs2241619	0.15	0.15	0.144	0.190096	0.0547	0.1468	0.1023	0.3707	0.1922	0.05	0.15	0.09	0.35	0.1296	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.026265	NA	NA	0.033941	0.323699	NA	0.087	NA	5.281759
1124	2	217039646	217039646	G	A	intronic	XRCC5	NA	NA	NA	ncRNA_exonic	ENSG00000236478	NA	NA	NA	Score=667;Name=lod=684	NA	2q35	NA	NA	NA	NA	rs72954616	0.02	0.02	0.029	0.0139776	0.0517	NA	0.0187	0.0008	0.0041	0.05	NA	0.02	0.002	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.739306	NA	NA	NA	NA	NA	0.058	NA	5.2816333
1124	3	137786442	137786442	T	C	exonic	DZIP1L	NA	nonsynonymous SNV	DZIP1L:NM_173543:exon14:c.A1933G:p.K645E	exonic	ENSG00000158163	NA	nonsynonymous SNV	ENSG00000158163:ENST00000327532:exon14:c.A1933G:p.K645E	NA	NA	3q22.3	NA	NA	NA	NA	rs442800	0.58	0.58	0.53	0.553115	0.6928	0.6141	0.6902	0.2579	0.6483	0.69	0.63	0.65	0.31	0.6457	0.71	0.42	T	0.0	B	0.0	B	0.922	N	1.000	P	-1.155	N	0.97	T	-0.997	T	0.000	T	0.2	-1.01	0.246	1.64	-0.081	-0.239	5.710	-1.010063	NA	1	0.713256	0.359283	NA	0.551	NA	5.2815774
1124	8	144944161	144944161	C	T	exonic	EPPK1	NA	synonymous SNV	EPPK1:NM_031308:exon1:c.G3261A:p.P1087P	exonic	ENSG00000227184	NA	synonymous SNV	ENSG00000227184:ENST00000525985:exon2:c.G3261A:p.P1087P	NA	NA	8q24.3	Score=826;Name=V$YY1_02	NA	NA	NA	rs35221054	0.31	0.31	0.293	0.29393	0.4712	0.2391	0.4524	0.025	0.4192	0.47	0.25	0.43	0.04	0.4311	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.171531	NA	NA	0.482988	0.094231	NA	0.232	NA	5.2813786
1124	5	79366249	79366249	T	G	intronic	THBS4	NA	NA	NA	ncRNA_intronic	ENSG00000249825	NA	NA	NA	NA	NA	5q14.1	NA	Name=PU.1	Name=30	NA	rs256438	0.29	0.29	0.271	0.269369	0.3897	0.256	0.268	0.1974	0.2577	0.39	0.25	0.31	0.17	0.3107	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.457073	NA	NA	0.351628	0.214026	NA	0.283	NA	5.2813053
1124	8	104337096	104337096	A	G	exonic	FZD6	NA	synonymous SNV	FZD6:NM_001164615:exon4:c.A762G:p.L254L,FZD6:NM_003506:exon4:c.A762G:p.L254L,FZD6:NM_001164616:exon5:c.A666G:p.L222L	exonic	ENSG00000164930	NA	synonymous SNV	ENSG00000164930:ENST00000358755:exon4:c.A762G:p.L254L,ENSG00000164930:ENST00000522484:exon4:c.A762G:p.L254L,ENSG00000164930:ENST00000522566:exon4:c.A762G:p.L254L,ENSG00000164930:ENST00000523739:exon5:c.A666G:p.L222L	Score=497;Name=lod=139	NA	8q22.3	NA	NA	NA	NA	rs3808554	0.46	0.46	0.428	0.449081	0.4573	0.6379	0.5086	0.2988	0.407	0.45	0.6	0.49	0.28	0.462	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.443995	NA	NA	0.466163	0.304358	NA	0.471	NA	5.2812036
1124	5	179045142	179045142	G	A	intronic	HNRNPH1	NA	NA	NA	intronic	ENSG00000169045	NA	NA	NA	NA	NA	5q35.3	NA	Name=Pol2(b),Pol2-4H8,Pol2,Pol2(phosphoS2)	Name=4	NA	rs4701143	0.33	0.33	0.289	0.339257	0.1998	0.6508	0.3833	0.143	0.3957	0.19	0.67	0.37	0.11	0.2965	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.779494	NA	NA	0.223256	0.153654	NA	0.254	NA	5.280444
1124	8	144682004	144682004	C	T	UTR3	TIGD5	NM_032862:c.*2C>T	NA	NA	UTR3	ENSG00000179886	ENST00000321385:c.*2C>T,ENST00000504548:c.*2C>T	NA	NA	NA	NA	8q24.3	Score=844;Name=V$PAX3_01	NA	NA	NA	rs111956838	0.01	0.01	0.01	0.0071885	0.0199	NA	0.0144	0.0015	0.0041	0.02	NA	0.01	0.002	0.0136	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.635577	2.635577	NA	0.01952	0.004155	NA	0.007	NA	5.2803134
1124	9	140262426	140262426	C	T	exonic	EXD3	NA	nonsynonymous SNV	EXD3:NM_017820:exon6:c.G478A:p.A160T	exonic	ENSG00000187609	NA	nonsynonymous SNV	ENSG00000187609:ENST00000340951:exon6:c.G478A:p.A160T,ENSG00000187609:ENST00000479452:exon6:c.G478A:p.A160T	NA	NA	9q34.3	NA	NA	NA	NA	rs11533158	0.69	0.69	0.695	0.70607	0.659	0.8522	0.7089	0.5356	0.8323	0.67	0.86	0.72	0.52	0.6977	0.86	1	T	0.002	B	0.0	B	0.143	N	0.998	P	-1.78	N	1.61	T	-1.000	T	0.000	T	0.016	-0.448	1.921	-1.53	-0.453	0.014	2.520	-0.44839	NA	1	0.696908	0.549098	ID=COSM1461396,COSM1461395;OCCURENCE=1(large_intestine)	0.529	NA	5.2797254
1124	4	113747608	113747608	G	A	intronic	ANK2	NA	NA	NA	ncRNA_exonic	ENSG00000234841	NA	NA	NA	Score=304;Name=lod=23	NA	4q25	NA	NA	NA	NA	rs17045022	0.08	0.08	0.081	0.0944489	0.0537	0.0288	0.0504	0.2012	0.091	0.04	0.03	0.05	0.2	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.594044	NA	NA	NA	NA	NA	0.051	NA	5.2796333
1124	11	64981853	64981853	G	T	exonic	SLC22A20	NA	nonsynonymous SNV	SLC22A20:NM_001004326:exon2:c.G438T:p.M146I	ncRNA_exonic	ENSG00000197847	NA	NA	NA	Score=483;Name=lod=123	NA	11q13.1	NA	NA	NA	NA	rs239259	0.33	0.33	0.306	0.297324	0.4115	0.3889	0.268	0.1082	0.362	0.42	0.4	0.33	0.12	0.3821	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.796591	NA	0	0.426949	0.151225	ID=COSM429603,COSM429602;OCCURENCE=2(breast)	0.254	NA	5.279451
1124	16	5140561	5140561	C	T	exonic	FAM86A	NA	synonymous SNV	FAM86A:NM_201598:exon4:c.G246A:p.S82S,FAM86A:NM_201400:exon5:c.G348A:p.S116S	exonic	ENSG00000118894	NA	synonymous SNV	ENSG00000118894:ENST00000587133:exon3:c.G165A:p.S55S,ENSG00000118894:ENST00000458008:exon4:c.G246A:p.S82S,ENSG00000118894:ENST00000427587:exon5:c.G348A:p.S116S	NA	NA	16p13.3	NA	NA	NA	NA	rs9673770	0.12	0.12	0.115	0.0916534	0.1402	0.128	0.17	0.0242	0.0399	0.15	0.14	0.15	0.04	0.1213	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.159	NA	NA	0.126047	0.031406	ID=COSM435376;OCCURENCE=1(breast)	0.043	NA	5.2791196
1124	12	11183191	11183191	T	C	exonic	TAS2R31	NA	synonymous SNV	TAS2R31:NM_176885:exon1:c.A744G:p.S248S	exonic	ENSG00000256436	NA	synonymous SNV	ENSG00000256436:ENST00000390675:exon1:c.A744G:p.S248S	NA	NA	12p13.2	NA	NA	NA	NA	rs116737741	0.08	0.08	0.082	0.0826677	0.1203	0.002	0.085	0.0847	0.1227	0.12	0.0017	0.07	0.1	0.1144	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.506749	NA	NA	0.152969	0.104195	NA	0.123	NA	5.2789976
1124	4	113747708	113747708	C	T	intronic	ANK2	NA	NA	NA	ncRNA_exonic	ENSG00000234841	NA	NA	NA	NA	NA	4q25	NA	NA	Name=5	NA	rs28477884	0.11	0.11	0.111	0.135583	0.0547	0.0308	0.0562	0.3517	0.091	0.04	0.03	0.06	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.325005	NA	NA	NA	NA	NA	0.065	NA	5.2786333
1124	19	4659924	4659924	C	T	intronic	C19orf10	NA	NA	NA	exonic	ENSG00000074842	NA	stopgain	ENSG00000074842:ENST00000599630:exon5:c.G461A:p.W154X	NA	NA	19p13.3	NA	NA	NA	NA	rs72620522	0.08	0.08	0.081	0.08127	0.0746	0.0516	0.0519	0.1339	0.0685	0.08	0.05	0.05	0.12	0.0774	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.437166	NA	NA	0.069419	0.121425	NA	0.08	NA	5.278581
1124	14	21388266	21388266	G	C	ncRNA_exonic	ECRP	NA	NA	NA	ncRNA_exonic	ENSG00000136315	NA	NA	NA	Score=284;Name=lod=19	NA	14q11.2	Score=685;Name=V$PPARG_02	NA	NA	NA	rs3748340	0.58	0.58	0.549	0.557508	0.7068	0.5119	0.7882	0.261	0.6881	0.7	0.56	0.76	0.28	0.6813	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.164154	NA	0.12	NA	NA	NA	0.58	NA	5.2785666
1124	2	121741811	121741811	C	T	intronic	GLI2	NA	NA	NA	intronic	ENSG00000074047	NA	NA	NA	NA	NA	2q14.2	NA	Name=CTCF	Name=2	NA	rs3820720	0.56	0.56	0.555	0.508586	0.7217	0.4802	0.5951	0.348	0.4744	0.71	0.51	0.59	0.34	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.029984	NA	NA	NA	NA	NA	0.594	NA	5.2783
1124	2	121741843	121741843	A	G	intronic	GLI2	NA	NA	NA	intronic	ENSG00000074047	NA	NA	NA	NA	NA	2q14.2	NA	Name=CTCF	Name=2	NA	rs3820719	0.56	0.56	0.584	0.510383	0.7217	0.4901	0.5937	0.348	0.4744	0.72	0.52	0.6	0.34	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.39992	NA	NA	NA	NA	NA	0.594	NA	5.2783
1124	19	35800720	35800720	G	C	intronic	MAG	NA	NA	NA	intronic	ENSG00000105695	NA	NA	NA	NA	NA	19q13.12	NA	Name=E2F6,HA-E2F1	Name=43	NA	rs10411883	0.81	0.81	0.824	0.847644	0.7217	0.8026	0.8098	0.9849	0.865	0.72	0.81	0.76	0.97	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.080824	NA	NA	NA	NA	NA	0.906	NA	5.2783
1124	1	217804635	217804635	T	C	upstream	GPATCH2,SPATA17	NA	NA	NA	upstream	ENSG00000092978,ENSG00000162814	NA	NA	NA	NA	NA	1q41	NA	Name=p300,TBP,c-Myc,Max,HEY1,SIX5,Mxi1_(bHLH),RFX5_(N-494),Pol2,YY1,YY1_(C-20),BRCA1_(C-1863),Sin3Ak-20,USF1_(SC-8983),TAF1,Pol2(b),JunD,ELK4,FOXA1_(C-20)	Name=148	NA	rs34121469	0.24	0.24	0.228	0.23762	0.3887	0.0962	0.2075	0.23	0.2597	0.42	0.08	0.22	0.19	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.545307	NA	NA	NA	NA	NA	0.297	NA	5.2779666
1124	2	89309554	89309554	T	A	intergenic	MIR4436A,NONE	dist=197586;dist=NONE	NA	NA	exonic	ENSG00000241755	NA	nonsynonymous SNV	ENSG00000241755:ENST00000493819:exon2:c.A276T:p.E92D	Score=472;Name=lod=110	NA	2p11.2	NA	NA	NA	NA	rs147109427	0.23	0.23	0.092	0.265775	0.163	0.4038	0.2767	0.1868	0.3282	0.14	0.4	0.22	0.16	0.2224	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.000244	NA	1	0.170187	0.176647	ID=COSN229350,COSN166176;OCCURENCE=1(skin),1(breast)	0.101	NA	5.2777464
1124	13	103498545	103498545	C	T	UTR5	ERCC5	NM_000123:c.-72C>T	NA	NA	UTR5	ENSG00000134899	ENST00000355739:c.-72C>T,ENST00000535557:c.-72C>T,ENST00000472151:c.-72C>T	NA	NA	NA	NA	13q33.1	NA	Name=Pol2-4H8,HEY1,Pol2,TAF1	NA	NA	rs2296148	0.08	0.08	0.084	0.0710863	0.0557	0.0496	0.0346	0.1301	0.0552	0.06	0.06	0.04	0.14	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.256995	1.256995	NA	NA	NA	NA	0.051	NA	5.2776334
1124	19	53793798	53793798	C	T	UTR5	BIRC8	NM_033341:c.-171G>A	NA	NA	UTR5	ENSG00000163098	ENST00000426466:c.-171G>A	NA	NA	Score=540;Name=lod=208	NA	19q13.42	NA	NA	NA	NA	rs12609478	0.1	0.1	0.108	0.107628	0.0557	0.1468	0.0403	0.1422	0.1217	0.05	0.16	0.05	0.16	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.446377	1.446377	NA	NA	NA	ID=COSN165930;OCCURENCE=1(breast)	0.138	NA	5.2776334
1124	3	156705971	156705971	C	G	intronic	LEKR1	NA	NA	NA	ncRNA_exonic	ENSG00000239706	NA	NA	NA	Score=405;Name=lod=59	NA	3q25.31	NA	NA	NA	NA	rs1482850	0.04	0.04	0.037	0.0391374	0.0557	0.002	0.0403	0.0764	0.0092	0.05	0.0017	0.04	0.06	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.245793	NA	NA	NA	NA	NA	0.043	NA	5.2776333
1124	11	77734209	77734209	T	C	exonic	KCTD14	NA	synonymous SNV	KCTD14:NM_023930:exon1:c.A87G:p.P29P	exonic	ENSG00000151364	NA	synonymous SNV	ENSG00000151364:ENST00000353172:exon1:c.A87G:p.P29P	NA	NA	11q14.1	NA	Name=Pol2-4H8,HEY1,Pol2,TAF1,ELF1_(SC-631)	Name=37	NA	rs11237362	0.69	0.69	0.628	0.689696	0.8002	0.5694	0.8127	0.5393	0.816	0.79	0.57	0.82	0.56	0.7685	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.409688	NA	NA	0.820503	0.596717	ID=COSM429906;OCCURENCE=1(breast)	0.732	NA	5.2774636
1124	16	33500591	33500591	G	C	ncRNA_intronic	RNU6-76P	NA	NA	NA	ncRNA_exonic	ENSG00000260518	NA	NA	NA	Score=671;Name=lod=712	NA	16p11.2	NA	NA	NA	NA	rs28534544	NA	NA	0.36	0.423522	0.3897	0.3968	0.3084	0.4947	0.4714	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.860962	NA	NA	NA	NA	NA	0.007	NA	5.2769666
1124	19	55143156	55143156	T	C	exonic	LILRB1	NA	synonymous SNV	LILRB1:NM_001081637:exon4:c.T276C:p.H92H,LILRB1:NM_001081638:exon4:c.T276C:p.H92H,LILRB1:NM_001081639:exon4:c.T276C:p.H92H,LILRB1:NM_006669:exon5:c.T276C:p.H92H	exonic	ENSG00000104972	NA	synonymous SNV	ENSG00000104972:ENST00000396315:exon3:c.T276C:p.H92H,ENSG00000104972:ENST00000396317:exon3:c.T276C:p.H92H,ENSG00000104972:ENST00000396321:exon3:c.T276C:p.H92H,ENSG00000104972:ENST00000418536:exon3:c.T276C:p.H92H,ENSG00000104972:ENST00000421584:exon3:c.T276C:p.H92H,ENSG00000104972:ENST00000427581:exon3:c.T384C:p.H128H,ENSG00000104972:ENST00000448689:exon3:c.T276C:p.H92H,ENSG00000104972:ENST00000324602:exon4:c.T276C:p.H92H,ENSG00000104972:ENST00000396327:exon4:c.T276C:p.H92H,ENSG00000104972:ENST00000396332:exon4:c.T276C:p.H92H,ENSG00000104972:ENST00000434867:exon4:c.T276C:p.H92H,ENSG00000104972:ENST00000396331:exon5:c.T276C:p.H92H	NA	NA	19q13.42	NA	NA	NA	NA	rs12462774	0.17	0.17	0.113	0.213858	0.1312	0.505	0.232	0.0575	0.1973	0.09	0.4	0.16	0.04	0.188	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.261763	NA	NA	0.070698	0.032456	NA	NA	NA	5.2767686
1124	2	197880683	197880683	A	G	intronic	ANKRD44	NA	NA	NA	ncRNA_exonic	ENSG00000225636	NA	NA	NA	Score=662;Name=lod=652	NA	2q33.1	NA	NA	NA	NA	rs76468065	0.06	0.06	0.071	0.0660942	0.0567	0.002	0.036	0.1762	0.0143	0.05	0.0017	0.04	0.16	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.214132	NA	NA	NA	NA	NA	0.08	NA	5.2766333
1124	8	93029605	93029605	C	T	UTR5	RUNX1T1	NM_175636:c.-37G>A	NA	NA	UTR5;UTR3	ENSG00000079102;ENSG00000079102	ENST00000422361:c.-37G>A,ENST00000520556:c.-37G>A,ENST00000521319:c.-37G>A;ENST00000519577:c.*32G>A,ENST00000521897:c.*32G>A,ENST00000519422:c.*32G>A,ENST00000521902:c.*32G>A	NA	NA	Score=662;Name=lod=651	NA	8q21.3	NA	NA	NA	NA	rs141395157	0.01	0.01	0.008	0.0125799	0.0268	NA	0.0101	0.0015	0.0276	0.03	NA	0.01	0.002	0.0151	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.849059	2.849059	NA	0.015233	0.001362	NA	NA	NA	5.2762004
1124	7	16834597	16834597	A	G	exonic	AGR2	NA	synonymous SNV	AGR2:NM_006408:exon7:c.T441C:p.N147N	exonic	ENSG00000106541	NA	synonymous SNV	ENSG00000106541:ENST00000450569:exon4:c.T231C:p.N77N,ENSG00000106541:ENST00000401412:exon7:c.T441C:p.N147N,ENSG00000106541:ENST00000419304:exon7:c.T441C:p.N147N,ENSG00000106541:ENST00000419572:exon7:c.T501C:p.N167N	Score=497;Name=lod=139	NA	7p21.1	NA	NA	NA	NA	rs6842	0.36	0.36	0.312	0.335463	0.4672	0.2976	0.4957	0.1051	0.4366	0.47	0.32	0.5	0.11	0.4275	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.464923	1.464923	NA	0.49686	0.166364	NA	0.261	NA	5.2751066
1125	5	180626030	180626030	G	A	intronic	TRIM7	NA	NA	NA	ncRNA_intronic	ENSG00000250900	NA	NA	NA	NA	NA	5q35.3	NA	NA	Name=3	NA	rs79848802	0.12	0.12	0.116	0.11222	0.0318	0.2907	0.0648	0.0719	0.0992	0.03	0.31	0.05	0.08	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.805025	NA	NA	0.027027	0.065751	NA	0.087	NA	5.2745063
1125	16	88705804	88705804	T	C	intronic	IL17C	NA	NA	NA	intronic	ENSG00000124391	NA	NA	NA	NA	NA	16q24.3	NA	Name=ZEB1_(SC-25388),HA-E2F1	Name=12	NA	rs2254073	0.76	0.76	0.745	0.775958	0.7256	0.7996	0.7133	0.8116	0.7996	0.71	0.8	0.73	0.81	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.210876	NA	NA	NA	NA	NA	0.754	NA	5.2744
1125	20	48574051	48574051	A	G	intergenic	RNF114,SNAI1	dist=3629;dist=25462	NA	NA	ncRNA_exonic	ENSG00000229222	NA	NA	NA	Score=540;Name=lod=209	NA	20q13.13	NA	NA	Name=17	NA	rs6067283	0.65	0.65	0.599	0.639776	0.7256	0.7639	0.7075	0.3351	0.7873	0.72	0.79	0.7	0.35	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.156569	NA	NA	NA	NA	NA	0.565	NA	5.2744
1125	1	113063125	113063125	A	G	exonic	WNT2B	NA	synonymous SNV	WNT2B:NM_024494:exon5:c.A1170G:p.Q390Q,WNT2B:NM_004185:exon6:c.A1113G:p.Q371Q	exonic	ENSG00000134245	NA	synonymous SNV	ENSG00000134245:ENST00000256640:exon5:c.A894G:p.Q298Q,ENSG00000134245:ENST00000369684:exon5:c.A1170G:p.Q390Q,ENSG00000134245:ENST00000369686:exon6:c.A1113G:p.Q371Q	Score=742;Name=lod=1382	NA	1p13.2	NA	NA	NA	NA	rs910697	0.52	0.52	0.508	0.483427	0.4612	0.6151	0.4438	0.5371	0.3262	0.47	0.64	0.44	0.53	0.4752	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.719849	NA	NA	0.45593	0.514526	NA	0.457	NA	5.2743366
1125	17	7843053	7843053	C	T	exonic	CNTROB	NA	synonymous SNV	CNTROB:NM_001037144:exon8:c.C1150T:p.L384L,CNTROB:NM_053051:exon8:c.C1150T:p.L384L	exonic	ENSG00000170037	NA	synonymous SNV	ENSG00000170037:ENST00000380255:exon8:c.C1150T:p.L384L,ENSG00000170037:ENST00000380262:exon8:c.C1150T:p.L384L,ENSG00000170037:ENST00000563694:exon8:c.C1150T:p.L384L,ENSG00000170037:ENST00000565740:exon8:c.C1150T:p.L384L	NA	NA	17p13.1	Score=975;Name=V$AP4_Q6	NA	NA	NA	rs11078719	0.55	0.55	0.52	0.594848	0.4274	0.8016	0.6398	0.4433	0.727	0.44	0.74	0.57	0.47	0.5297	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.198565	NA	NA	0.435566	0.463913	NA	0.522	NA	5.2740006
1125	6	29913386	29913386	C	G	UTR3	HLA-A	NM_001242758:c.*154C>G,NM_002116:c.*154C>G	NA	NA	UTR3	ENSG00000206503	ENST00000396634:c.*154C>G,ENST00000376806:c.*154C>G,ENST00000376809:c.*154C>G,ENST00000376802:c.*154C>G	NA	NA	NA	NA	6p22.1	NA	Name=Pol2-4H8	NA	NA	rs41545022	0.08	0.08	0.049	0.101837	0.0596	0.2629	0.0403	0.0008	0.1595	0.06	0.22	0.04	0.002	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.180545	NA	NA	NA	NA	NA	0.087	NA	5.2737334
1125	19	1073409	1073409	C	G	intronic	HMHA1	NA	NA	NA	intronic	ENSG00000180448	NA	NA	NA	NA	NA	19p13.3	NA	Name=GABP,Pol2,TAL1_(SC-12984),CCNT2,ZBTB7A_(SC-34508)	Name=6	NA	rs2074441	0.78	0.78	0.782	0.773363	0.7266	0.6409	0.8386	0.9455	0.6789	0.73	0.69	0.81	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.103006	NA	NA	NA	NA	NA	0.804	NA	5.2734
1125	1	232607094	232607094	T	C	intronic	SIPA1L2	NA	NA	NA	intronic	ENSG00000116991	NA	NA	NA	NA	NA	1q42.2	NA	Name=c-Fos,STAT3	Name=18	NA	rs12116822	0.23	0.23	0.218	0.252196	0.2306	0.1647	0.3963	0.2224	0.3027	0.22	0.16	0.37	0.23	0.2558	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.06113	NA	NA	0.240308	0.243921	NA	0.333	NA	5.273292
1125	12	51735022	51735022	A	T	intronic	CELA1	NA	NA	NA	intronic	ENSG00000139610	NA	NA	NA	Score=405;Name=lod=59	NA	12q13.13	NA	Name=CTCF	Name=145	NA	rs934089	0.49	0.49	0.502	0.494609	0.5934	0.4117	0.4669	0.3691	0.6677	0.61	0.45	0.48	0.38	0.5571	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.825883	2.825883	NA	0.576744	0.4133	NA	0.493	NA	5.272756
1125	16	69362777	69362777	T	A	UTR3	COG8,PDF	NM_032382:c.*332A>T;NM_022341:c.*148A>T	NA	NA	UTR3	ENSG00000213380,ENSG00000258429	ENST00000306875:c.*332A>T,ENST00000562949:c.*162A>T;ENST00000288022:c.*148A>T	NA	NA	NA	NA	16q22.1	NA	NA	Name=99	NA	rs1055401	0.05	0.05	0.035	0.0644968	0.0606	0.0417	0.0432	0.0257	0.1595	0.06	0.04	0.06	0.03	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.967947	1.967947	NA	NA	NA	NA	NA	NA	5.2727334
1125	16	69362779	69362779	C	A	UTR3	COG8,PDF	NM_032382:c.*330G>T;NM_022341:c.*146G>T	NA	NA	UTR3	ENSG00000213380,ENSG00000258429	ENST00000306875:c.*330G>T,ENST00000562949:c.*160G>T;ENST00000288022:c.*146G>T	NA	NA	NA	NA	16q22.1	NA	NA	Name=99	NA	rs1055399	0.05	0.05	0.035	0.0644968	0.0606	0.0417	0.0432	0.0257	0.1595	0.06	0.04	0.06	0.03	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.747104	1.747104	NA	NA	NA	NA	NA	NA	5.2727334
1125	21	46047633	46047633	A	G	exonic	KRTAP10-9	NA	nonsynonymous SNV	KRTAP10-9:NM_198690:exon1:c.A545G:p.Y182C	exonic	ENSG00000221837	NA	nonsynonymous SNV	ENSG00000221837:ENST00000397911:exon1:c.A545G:p.Y182C	NA	NA	21q22.3	NA	NA	NA	NA	rs8127342	0.64	0.64	0.612	0.637181	0.7167	0.6667	0.6772	0.5219	0.6524	0.71	0.64	0.68	0.53	0.6687	0.71	.	.	0.0	B	0.0	B	.	.	0.999	P	-4.235	N	5.72	T	-0.979	T	0.000	T	0.042	-2.838	0	1.28	0.092	0.351	6.709	-2.83791	NA	1	0.675581	0.532002	NA	0.058	NA	5.2723524
1125	7	43988188	43988188	C	T	ncRNA_intronic	POLR2J4	NA	NA	NA	ncRNA_intronic	ENSG00000214783	NA	NA	NA	NA	NA	7p13	Score=814;Name=V$CDPCR3_01	NA	NA	NA	rs62458690	0.12	0.12	0.105	0.0988419	0.1402	0.0615	0.1643	0.0908	0.0593	0.15	0.08	0.15	0.1	0.1303	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.935582	NA	NA	0.124302	0.108488	ID=COSN168033;OCCURENCE=1(large_intestine)	0.109	NA	5.2718646
1125	1	29345027	29345027	T	G	intronic	EPB41	NA	NA	NA	intronic	ENSG00000159023	NA	NA	NA	NA	NA	1p35.3	Score=959;Name=V$SOX5_01	Name=FOXA1_(C-20)	NA	NA	rs2985334	0.83	0.83	0.821	0.851637	0.7286	0.9256	0.8415	0.8752	0.8773	0.74	0.94	0.82	0.85	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.368808	1.368808	NA	NA	NA	NA	0.812	NA	5.2714
1125	15	101567547	101567547	G	C	exonic	LRRK1	NA	synonymous SNV	LRRK1:NM_024652:exon18:c.G2487C:p.V829V	exonic	ENSG00000154237	NA	synonymous SNV	ENSG00000154237:ENST00000388948:exon18:c.G2487C:p.V829V,ENSG00000154237:ENST00000284395:exon19:c.G2478C:p.V826V	NA	NA	15q26.3	NA	NA	NA	NA	rs41319544	0.09	0.09	0.081	0.0878594	0.1322	0.0278	0.0749	0.0938	0.1053	0.13	0.02	0.1	0.08	0.1154	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.014323	NA	NA	0.147847	0.091134	NA	0.065	NA	5.2712196
1125	11	68851466	68851466	G	T	exonic	TPCN2	NA	synonymous SNV	TPCN2:NM_139075:exon19:c.G1743T:p.A581A	exonic	ENSG00000162341	NA	synonymous SNV	ENSG00000162341:ENST00000294309:exon19:c.G1743T:p.A581A	NA	NA	11q13.3	Score=796;Name=V$CMYB_01	NA	NA	NA	rs896973	0.38	0.38	0.378	0.333466	0.4831	0.2867	0.3285	0.357	0.1994	0.46	0.28	0.36	0.37	0.4139	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.148208	NA	NA	0.498486	0.383636	NA	0.341	NA	5.2711806
1125	12	11138935	11138935	T	C	exonic	TAS2R50	NA	synonymous SNV	TAS2R50:NM_176890:exon1:c.A525G:p.S175S	exonic	ENSG00000212126	NA	synonymous SNV	ENSG00000212126:ENST00000506868:exon1:c.A525G:p.S175S	NA	NA	12p13.2	NA	NA	NA	NA	rs66679979	0.09	0.09	0.105	0.0984425	0.1252	0.002	0.0908	0.1346	0.1268	0.12	0.0017	0.07	0.18	0.1182	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.254223	NA	NA	0.152209	0.143214	NA	0.159	NA	5.2710576
1125	6	168457966	168457966	G	A	exonic	FRMD1	NA	synonymous SNV	FRMD1:NM_001122841:exon11:c.C1257T:p.D419D,FRMD1:NM_024919:exon11:c.C1461T:p.D487D	exonic	ENSG00000153303	NA	synonymous SNV	ENSG00000153303:ENST00000537786:exon10:c.C774T:p.D258D,ENSG00000153303:ENST00000283309:exon11:c.C1461T:p.D487D,ENSG00000153303:ENST00000440994:exon11:c.C1257T:p.D419D	Score=321;Name=lod=27	NA	6q27	NA	NA	NA	NA	rs3734899	0.39	0.39	0.369	0.395567	0.493	0.4871	0.353	0.1074	0.6207	0.5	0.47	0.38	0.13	0.4466	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.089598	NA	NA	0.456279	0.169315	NA	0.275	NA	5.2707876
1125	16	72025099	72025099	C	T	intronic	PKD1L3	NA	NA	NA	ncRNA_exonic	ENSG00000242176	NA	NA	NA	Score=493;Name=lod=135	NA	16q22.2	NA	NA	NA	NA	rs74647029	0.03	0.03	0.025	0.0261581	0.0626	NA	0.0231	0.0015	0.0511	0.07	NA	0.02	0.002	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.113657	NA	NA	NA	NA	NA	0.014	NA	5.2707333
1125	1	54375701	54375701	C	T	UTR3	DIO1	NM_000792:c.*29C>T,NM_001039716:c.*93C>T,NM_001039715:c.*29C>T,NM_213593:c.*29C>T	NA	NA	UTR3	ENSG00000211452	ENST00000361921:c.*29C>T,ENST00000322679:c.*93C>T,ENST00000527060:c.*519C>T,ENST00000525044:c.*221C>T,ENST00000528946:c.*157C>T,ENST00000530084:c.*421C>T	NA	NA	NA	NA	1p32.3	NA	Name=FOSL2	Name=50	NA	rs11206244	0.29	0.29	0.239	0.3125	0.3678	0.1468	0.5173	0.1589	0.4888	0.38	0.15	0.48	0.16	0.354	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.577811	2.577811	NA	0.340814	0.218112	NA	0.355	NA	5.2707194
1125	7	150709571	150709571	G	T	UTR3	ATG9B	NM_173681:c.*1452C>A	NA	NA	UTR3	ENSG00000181652	ENST00000605938:c.*1880C>A,ENST00000444312:c.*1452C>A,ENST00000377974:c.*1452C>A	NA	NA	NA	NA	7q36.1	NA	Name=HNF4G_(SC-6558),ELF1_(SC-631),RXRA,HEY1,HDAC2_(SC-6296)	Name=11	NA	rs7830	0.36	0.36	0.304	0.361821	0.3499	0.4117	0.5187	0.1936	0.4387	0.36	0.46	0.49	0.17	0.3779	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.524699	NA	NA	0.335	0.197548	NA	0.312	NA	5.2705334
1125	20	33584289	33584289	C	T	exonic	MYH7B	NA	synonymous SNV	MYH7B:NM_020884:exon29:c.C3210T:p.T1070T	exonic	ENSG00000078814	NA	synonymous SNV	ENSG00000078814:ENST00000262873:exon27:c.C3210T:p.T1070T	Score=578;Name=lod=297	NA	20q11.22	NA	NA	NA	NA	rs3746438	0.48	0.48	0.426	0.439497	0.495	0.5893	0.6326	0.2738	0.3149	0.48	0.61	0.57	0.26	0.4588	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.280575	1.280575	NA	0.442375	0.316901	NA	0.326	NA	5.2704916
1125	16	21008690	21008690	T	C	exonic	DNAH3	NA	synonymous SNV	DNAH3:NM_017539:exon44:c.A6516G:p.K2172K	exonic	ENSG00000158486	NA	synonymous SNV	ENSG00000158486:ENST00000261383:exon44:c.A6516G:p.K2172K	Score=528;Name=lod=187	NA	16p12.3	NA	NA	NA	NA	rs3115446	0.49	0.49	0.468	0.540136	0.4543	0.4851	0.5259	0.5976	0.6176	0.44	0.47	0.49	0.61	0.4959	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.357701	1.357701	NA	0.446628	0.591776	NA	0.507	NA	5.2698386
1125	2	219252377	219252377	C	T	intronic	SLC11A1	NA	NA	NA	intronic	ENSG00000018280	NA	NA	NA	NA	NA	2q35	NA	Name=SP1,KAP1,HNF4A_(H-171),FOXA1_(C-20),p300,ELF1_(SC-631),FOXA1_(SC-101058),HNF4G_(SC-6558)	Name=125	NA	rs2290708	0.16	0.16	0.156	0.147963	0.2505	0.0813	0.183	0.1165	0.1288	0.23	0.09	0.18	0.12	0.2143	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.290722	NA	NA	0.265465	0.129369	NA	0.159	NA	5.269735
1125	11	130166094	130166094	T	C	intronic	ZBTB44	NA	NA	NA	ncRNA_exonic	ENSG00000255220	NA	NA	NA	Score=811;Name=lod=2623	NA	11q24.3	NA	NA	NA	NA	rs111336767	0.03	0.03	0.029	0.0169728	0.0636	NA	0.0216	0.0015	0.0041	0.08	NA	0.02	0.0041	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.550015	NA	NA	NA	NA	NA	0.022	NA	5.2697333
1125	17	8464830	8464830	G	A	intronic	MYH10	NA	NA	NA	ncRNA_exonic	ENSG00000244604	NA	NA	NA	Score=705;Name=lod=979	NA	17p13.1	NA	NA	NA	NA	rs62062489	0.04	0.04	0.027	0.0425319	0.0636	0.0188	0.036	0.0023	0.1043	0.07	0.02	0.05	0.01	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.950534	NA	NA	NA	NA	NA	0.022	NA	5.2697333
1125	19	53959568	53959568	G	C	exonic	ZNF761	NA	nonsynonymous SNV	ZNF761:NM_001008401:exon7:c.G1807C:p.E603Q	ncRNA_exonic	ENSG00000160336	NA	NA	NA	Score=419;Name=lod=67	NA	19q13.42	NA	NA	NA	NA	rs2617726	0.37	0.37	0.318	0.386581	0.3986	0.2401	0.5346	0.3964	0.407	0.4	0.25	0.54	0.36	0.4253	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.643604	NA	0.09	0.406468	0.40286	ID=COSM1564248;OCCURENCE=1(large_intestine)	0.37	NA	5.269632
1125	12	56825311	56825311	C	T	exonic	TIMELESS	NA	synonymous SNV	TIMELESS:NM_003920:exon8:c.G765A:p.V255V	exonic	ENSG00000111602	NA	synonymous SNV	ENSG00000111602:ENST00000229201:exon8:c.G762A:p.V254V,ENSG00000111602:ENST00000553532:exon8:c.G765A:p.V255V,ENSG00000111602:ENST00000554616:exon8:c.G765A:p.V255V	Score=570;Name=lod=276	NA	12q13.3	NA	NA	NA	NA	rs774033	0.49	0.49	0.432	0.504193	0.4503	0.7371	0.6816	0.2526	0.5337	0.45	0.7	0.61	0.23	0.4925	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.016843	NA	NA	0.454302	0.269859	NA	0.5	NA	5.2695646
1125	2	10264057	10264057	T	C	intronic	RRM2	NA	NA	NA	intronic	ENSG00000171848	NA	NA	NA	NA	NA	2p25.1	NA	Name=STAT3,TBP	Name=134	NA	rs6432065	0.66	0.66	0.694	0.65635	0.7306	0.3363	0.5648	0.9592	0.5654	0.72	0.35	0.6	0.95	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.128358	NA	NA	NA	NA	NA	0.739	NA	5.2694
1125	18	21404334	21404334	A	G	intronic	LAMA3	NA	NA	NA	intronic	ENSG00000053747	NA	NA	NA	NA	NA	18q11.2	NA	Name=CTCF,Rad21,SMC3_(ab9263),CTCF_(C-20)	Name=15	NA	rs1941521	0.75	0.75	0.734	0.720447	0.7306	0.8065	0.7839	0.6604	0.6575	0.72	0.82	0.77	0.69	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.837634	1.837634	NA	NA	NA	NA	0.725	NA	5.2694
1125	11	16848077	16848077	G	A	exonic	PLEKHA7	NA	synonymous SNV	PLEKHA7:NM_175058:exon10:c.C933T:p.H311H	exonic	ENSG00000166689	NA	synonymous SNV	ENSG00000166689:ENST00000355661:exon10:c.C933T:p.H311H,ENSG00000166689:ENST00000448080:exon10:c.C933T:p.H311H,ENSG00000166689:ENST00000531066:exon10:c.C933T:p.H311H	NA	NA	11p15.1	NA	NA	NA	NA	rs390974	0.18	0.18	0.201	0.194289	0.1352	0.1617	0.2032	0.3079	0.1288	0.12	0.17	0.19	0.26	0.1421	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.344033	NA	NA	0.120051	0.265682	NA	0.232	NA	5.2693156
1125	7	35221053	35221053	A	G	ncRNA_exonic	DPY19L2P1	NA	NA	NA	ncRNA_exonic	ENSG00000189212	NA	NA	NA	Score=621;Name=lod=447	NA	7p14.2	NA	NA	NA	NA	rs6950920	0.32	0.32	0.275	0.306709	0.3976	0.1984	0.2767	0.3079	0.3446	0.4	0.21	0.3	0.32	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.536558	2.536558	NA	NA	NA	NA	0.341	NA	5.2690666
1125	4	96256616	96256616	A	G	exonic	UNC5C	NA	synonymous SNV	UNC5C:NM_003728:exon2:c.T291C:p.S97S	exonic	ENSG00000182168	NA	synonymous SNV	ENSG00000182168:ENST00000453304:exon2:c.T291C:p.S97S,ENSG00000182168:ENST00000504962:exon2:c.T291C:p.S97S,ENSG00000182168:ENST00000506749:exon2:c.T291C:p.S97S,ENSG00000182168:ENST00000513796:exon2:c.T291C:p.S97S	Score=655;Name=lod=614	NA	4q22.3	NA	NA	NA	NA	rs4699423	0.5	0.5	0.469	0.478634	0.4573	0.8343	0.5418	0.1324	0.5573	0.48	0.84	0.52	0.14	0.4832	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.328977	1.328977	NA	0.457432	0.183613	NA	0.384	NA	5.2687346
1125	5	96098749	96098749	G	T	UTR3	ERAP1	NM_016442:c.*155C>A	NA	NA	UTR3	ENSG00000164307	ENST00000296754:c.*155C>A	NA	NA	NA	NA	5q15	NA	Name=GATA-2,TCF4	NA	NA	rs76641636	0.04	0.04	0.04	0.0511182	0.0646	0.0228	0.0418	0.0151	0.1217	0.05	0.03	0.05	0.01	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.714416	NA	NA	NA	NA	NA	0.022	NA	5.2687334
1125	1	156884365	156884365	T	C	intronic	PEAR1	NA	NA	NA	intronic	ENSG00000187800	NA	NA	NA	NA	NA	1q23.1	NA	Name=GATA2_(CG2-96),IRF1,TBP,ZBTB7A_(SC-34508),CCNT2,Egr-1,NRSF,SP1,ZNF263,eGFP-JunD,c-Jun,GATA-1,TAL1_(SC-12984)	Name=60	NA	rs749256	0.88	0.88	0.882	0.910343	0.7316	1	0.8602	0.9705	0.956	0.74	1	0.83	0.98	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.313837	NA	NA	NA	NA	NA	0.804	NA	5.2684
1125	5	132160057	132160057	C	T	exonic	SHROOM1	NA	synonymous SNV	SHROOM1:NM_133456:exon4:c.G1296A:p.Q432Q,SHROOM1:NM_001172700:exon7:c.G1296A:p.Q432Q	exonic	ENSG00000164403	NA	synonymous SNV	ENSG00000164403:ENST00000378676:exon3:c.G1089A:p.Q363Q,ENSG00000164403:ENST00000319854:exon4:c.G1296A:p.Q432Q,ENSG00000164403:ENST00000378679:exon7:c.G1296A:p.Q432Q	NA	NA	5q31.1	NA	NA	NA	NA	rs35534543	0.1	0.1	0.077	0.10623	0.1203	0.1171	0.0793	0.0416	0.1871	0.12	0.12	0.09	0.04	0.1385	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.417859	NA	NA	0.139535	0.050159	NA	0.145	NA	5.2683316
1125	11	102576358	102576358	T	C	exonic	MMP27	NA	nonsynonymous SNV	MMP27:NM_022122:exon1:c.A88G:p.M30V	exonic	ENSG00000137675	NA	nonsynonymous SNV	ENSG00000137675:ENST00000260229:exon1:c.A88G:p.M30V	NA	NA	11q22.2	NA	NA	NA	NA	rs2846707	0.79	0.79	0.787	0.815895	0.6799	0.8839	0.7233	0.9213	0.8088	0.65	0.89	0.75	0.92	0.7258	0.92	0.91	T	0.002	B	0.012	B	0.022	N	1.000	P	0.47	N	2.2	T	-0.988	T	0.000	T	0.026	-1.768	0.01	0.184	-0.282	-0.323	7.201	-1.767913	NA	0.46	0.659805	0.872901	NA	0.855	NA	5.2678284
1125	16	2647876	2647876	C	T	UTR3	PDPK1	NM_002613:c.*108C>T,NM_001261816:c.*203C>T,NM_031268:c.*108C>T	NA	NA	UTR3	ENSG00000140992	ENST00000342085:c.*108C>T,ENST00000441549:c.*203C>T,ENST00000268673:c.*108C>T,ENST00000354836:c.*108C>T,ENST00000389224:c.*108C>T	NA	NA	Score=531;Name=lod=191	NA	16p13.3	NA	NA	NA	NA	rs10866	0.03	0.03	0.018	0.0275559	0.0656	0.003	0.0331	0.0015	0.045	0.07	0.0017	0.04	NA	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.672818	1.672818	NA	NA	NA	NA	0.014	NA	5.2677334
1125	16	78389590	78389590	C	T	intronic	WWOX	NA	NA	NA	ncRNA_exonic	ENSG00000260014	NA	NA	NA	Score=643;Name=lod=549	NA	16q23.1	NA	NA	NA	NA	rs76286129	0.08	0.08	0.063	0.0740815	0.0656	0.1667	0.0634	0.003	0.091	0.06	0.17	0.06	0.01	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.039606	NA	NA	NA	NA	NA	0.065	NA	5.2677333
1125	16	78389699	78389699	T	G	intronic	WWOX	NA	NA	NA	ncRNA_exonic	ENSG00000260014	NA	NA	NA	Score=643;Name=lod=549	NA	16q23.1	NA	NA	NA	NA	rs72794061	0.08	0.08	0.065	0.0748802	0.0656	0.1716	0.0634	0.0023	0.091	0.06	0.18	0.06	0.01	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.417869	NA	NA	NA	NA	NA	0.08	NA	5.2677333
1125	5	9380110	9380110	T	C	UTR5	SEMA5A	NM_003966:c.-52A>G	NA	NA	ncRNA_UTR5	ENSG00000112902	NA	NA	NA	Score=385;Name=lod=49	NA	5p15.31	NA	NA	NA	NA	rs1805243	0.05	0.05	0.045	0.0547125	0.0815	0.0188	0.0461	0.0159	0.1227	0.08	0.01	0.06	0.03	0.0699	0.082	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.727094	1.727094	NA	0.081637	0.016956	NA	0.036	NA	5.266963
1125	19	12090312	12090312	C	A	UTR3	ZNF763	NM_001012753:c.*388C>A	NA	NA	UTR3	ENSG00000197054	ENST00000343949:c.*388C>A	NA	NA	NA	NA	19p13.2	NA	Name=KAP1,SETDB1	NA	NA	rs190705	0.16	0.16	0.187	0.19389	0.0666	0.0278	0.0749	0.5764	0.0634	0.06	0.04	0.08	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.687792	NA	NA	NA	NA	NA	0.232	NA	5.2667334
1125	1	248167139	248167139	C	G	intronic	OR2L13	NA	NA	NA	ncRNA_exonic	ENSG00000232215	NA	NA	NA	Score=265;Name=lod=16	NA	1q44	NA	NA	NA	NA	rs72763234	0.1	0.1	0.087	0.086262	0.0666	0.1419	0.0288	0.1157	0.0501	0.06	0.18	0.03	0.11	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.262801	NA	NA	NA	NA	NA	0.058	NA	5.2667333
1125	16	78389444	78389444	C	T	intronic	WWOX	NA	NA	NA	ncRNA_exonic	ENSG00000260014	NA	NA	NA	Score=643;Name=lod=549	NA	16q23.1	NA	NA	NA	NA	rs113112892	0.08	0.08	0.068	0.0750799	0.0666	0.1687	0.0634	0.003	0.093	0.06	0.18	0.06	0.01	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.525761	NA	NA	NA	NA	NA	0.065	NA	5.2667333
1125	5	96098758	96098758	C	T	UTR3	ERAP1	NM_016442:c.*146G>A	NA	NA	UTR3	ENSG00000164307	ENST00000296754:c.*146G>A	NA	NA	NA	NA	5q15	NA	Name=GATA-2,TCF4	NA	NA	rs3822682	0.07	0.07	0.073	0.0748802	0.0676	0.0238	0.0476	0.1543	0.047	0.05	0.03	0.07	0.13	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.49303	NA	NA	NA	NA	NA	0.094	NA	5.2657334
1125	22	42962218	42962218	C	G	intronic	SERHL2	NA	NA	NA	ncRNA_intronic	ENSG00000182841	NA	NA	NA	NA	NA	22q13.2	NA	Name=Pol2	NA	NA	rs9623626	0.25	0.25	0.241	0.260583	0.0676	0.5833	0.121	0.2837	0.1943	0.07	0.55	0.12	0.28	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.115401	NA	NA	NA	NA	NA	0.138	NA	5.2657333
1125	12	49255798	49255798	G	C	exonic	RND1	NA	synonymous SNV	RND1:NM_014470:exon3:c.C312G:p.L104L	exonic	ENSG00000172602	NA	synonymous SNV	ENSG00000172602:ENST00000309739:exon3:c.C312G:p.L104L	Score=449;Name=lod=89	NA	12q13.12	NA	NA	NA	NA	rs1565933	0.42	0.42	0.387	0.410743	0.4722	0.3869	0.5432	0.2821	0.4519	0.46	0.41	0.53	0.3	0.459	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.969341	NA	NA	0.469884	0.332955	NA	0.399	NA	5.2655826
1125	6	28542520	28542520	C	T	exonic	SCAND3	NA	synonymous SNV	SCAND3:NM_052923:exon3:c.G1962A:p.K654K	exonic	ENSG00000232040	NA	synonymous SNV	ENSG00000232040:ENST00000452236:exon3:c.G1962A:p.K654K	Score=383;Name=lod=48	NA	6p22.1	NA	NA	NA	NA	rs370520	0.62	0.62	0.635	0.651558	0.4354	0.6716	0.5461	0.9274	0.5552	0.42	0.69	0.54	0.92	0.5154	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.064604	NA	NA	0.450349	0.846346	NA	0.652	NA	5.2655176
1126	6	56840553	56840553	C	T	intronic	BEND6	NA	NA	NA	ncRNA_exonic	ENSG00000219790	NA	NA	NA	Score=706;Name=lod=985	NA	6p12.1	NA	NA	NA	NA	rs9396245	0.09	0.09	0.075	0.0992412	0.0686	0.1915	0.0836	0.0885	0.0613	0.07	0.14	0.09	0.08	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.291592	NA	NA	NA	NA	NA	0.123	NA	5.2647333
1126	15	64885245	64885245	G	T	intronic	ZNF609	NA	NA	NA	ncRNA_exonic	ENSG00000243403	NA	NA	NA	Score=720;Name=lod=1122	NA	15q22.31	NA	NA	NA	NA	rs117686856	0.03	0.03	0.025	0.034345	0.0686	0.001	0.0245	0.003	0.0828	0.07	NA	0.02	0.0041	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.416205	NA	NA	NA	NA	NA	0.065	NA	5.2647333
1126	6	29896054	29896054	C	A	intergenic	HCG4B,HLA-A	dist=2626;dist=14193	NA	NA	ncRNA_exonic	ENSG00000230795	NA	NA	NA	Score=383;Name=lod=48	NA	6p22.1	Score=779;Name=V$MYCMAX_03	NA	NA	NA	rs9259844	NA	NA	0.677	0.794928	0.7356	0.9028	0.804	0.708	0.8558	NA	NA	NA	NA	NA	0.054	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.842855	NA	NA	NA	NA	NA	0.087	NA	5.2644
1126	6	28542424	28542424	G	A	exonic	SCAND3	NA	synonymous SNV	SCAND3:NM_052923:exon3:c.C2058T:p.D686D	exonic	ENSG00000232040	NA	synonymous SNV	ENSG00000232040:ENST00000452236:exon3:c.C2058T:p.D686D	Score=399;Name=lod=56	NA	6p22.1	NA	NA	NA	NA	rs450630	0.62	0.62	0.631	0.651558	0.4354	0.6716	0.5461	0.9274	0.5552	0.42	0.69	0.54	0.92	0.5163	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.317395	NA	NA	0.450698	0.846346	NA	0.652	NA	5.2642686
1126	5	177675217	177675217	C	T	exonic	COL23A1	NA	synonymous SNV	COL23A1:NM_173465:exon20:c.G1188A:p.A396A	exonic	ENSG00000050767	NA	synonymous SNV	ENSG00000050767:ENST00000390654:exon20:c.G1188A:p.A396A	NA	NA	5q35.3	NA	Name=TCF12	NA	NA	rs2913851	0.32	0.32	0.314	0.303115	0.4771	0.2192	0.4409	0.0991	0.3885	0.48	0.21	0.49	0.1	0.4282	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.076822	NA	NA	0.497238	0.148723	ID=COSM1436390;OCCURENCE=1(large_intestine)	0.399	NA	5.2641286
1126	14	23848311	23848311	C	T	exonic	CMTM5	NA	synonymous SNV	CMTM5:NM_138460:exon3:c.C351T:p.D117D	exonic	ENSG00000166091	NA	synonymous SNV	ENSG00000166091:ENST00000397227:exon2:c.C198T:p.D66D,ENSG00000166091:ENST00000359320:exon3:c.C351T:p.D117D,ENSG00000166091:ENST00000555731:exon3:c.C237T:p.D79D,ENSG00000166091:ENST00000339180:exon4:c.C552T:p.D184D	Score=544;Name=lod=217	NA	14q11.2	NA	NA	NA	NA	rs723840	0.5	0.5	0.547	0.509385	0.4742	0.256	0.3674	0.848	0.4499	0.48	0.29	0.41	0.83	0.459	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.303409	1.303409	NA	0.470465	0.776214	ID=COSM147744;OCCURENCE=1(stomach)	0.435	NA	5.2630016
1126	11	123777536	123777536	G	A	exonic	OR8D4	NA	nonsynonymous SNV	OR8D4:NM_001005197:exon1:c.G398A:p.R133K	exonic	ENSG00000181518	NA	nonsynonymous SNV	ENSG00000181518:ENST00000321355:exon1:c.G398A:p.R133K	NA	NA	11q24.1	NA	NA	NA	NA	rs7926767	0.7	0.7	0.688	0.6873	0.6809	0.7262	0.7911	0.6475	0.6339	0.68	0.75	0.79	0.62	0.6986	0.79	0.23	T	0.0	B	0.0	B	0.798	N	1.000	P	-0.18	N	2.17	T	-1.022	T	0.000	T	0.021	0.44	6.388	-0.916	-0.353	-0.716	1.765	0.439618	NA	0.21	0.690975	0.646004	NA	0.681	NA	5.2628584
1126	5	173316729	173316729	G	A	UTR5	CPEB4	NM_030627:c.-8G>A	NA	NA	UTR5	ENSG00000113742	ENST00000265085:c.-8G>A,ENST00000334035:c.-8G>A,ENST00000520867:c.-8G>A,ENST00000519835:c.-8G>A	NA	NA	Score=793;Name=lod=2232	NA	5q35.2	Score=797;Name=V$MEF2_04	NA	Name=99	NA	rs359467	0.54	0.54	0.551	0.551917	0.6948	0.3591	0.4928	0.5575	0.638	0.71	0.33	0.52	0.56	0.6471	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.432236	1.432236	NA	0.728658	0.566046	NA	0.688	NA	5.2627754
1126	5	153717709	153717709	G	A	intronic	GALNT10	NA	NA	NA	ncRNA_exonic	ENSG00000253119	NA	NA	NA	Score=594;Name=lod=347	NA	5q33.2	NA	NA	NA	NA	rs113684016	0.05	0.05	0.046	0.0551118	0.0706	0.002	0.0432	0.0756	0.0746	0.07	0.0035	0.05	0.06	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.570495	1.570495	NA	NA	NA	NA	0.036	NA	5.2627333
1126	19	43372386	43372386	T	C	exonic	PSG1	NA	synonymous SNV	PSG1:NM_001184825:exon5:c.A1110G:p.E370E,PSG1:NM_001184826:exon5:c.A1110G:p.E370E,PSG1:NM_006905:exon5:c.A1110G:p.E370E	exonic	ENSG00000231924	NA	synonymous SNV	ENSG00000231924:ENST00000403380:exon4:c.A831G:p.E277E,ENSG00000231924:ENST00000595124:exon4:c.A831G:p.E277E,ENSG00000231924:ENST00000244296:exon5:c.A1110G:p.E370E,ENSG00000231924:ENST00000312439:exon5:c.A1110G:p.E370E,ENSG00000231924:ENST00000436291:exon5:c.A1110G:p.E370E,ENSG00000231924:ENST00000595356:exon5:c.A1110G:p.E370E	NA	NA	19q13.2	NA	NA	NA	NA	rs1064491	0.23	0.23	0.213	0.286741	0.1014	0.4167	0.1945	0.3139	0.3722	0.1	0.4	0.14	0.28	0.1938	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.601166	NA	NA	0.108888	0.287597	NA	0.239	NA	5.2625786
1126	10	120920588	120920588	T	C	exonic	SFXN4	NA	synonymous SNV	SFXN4:NM_213649:exon4:c.A258G:p.Q86Q	exonic	ENSG00000183605	NA	synonymous SNV	ENSG00000183605:ENST00000355697:exon4:c.A258G:p.Q86Q	Score=374;Name=lod=44	NA	10q26.11	NA	NA	NA	NA	rs10749291	0.51	0.51	0.508	0.494409	0.4374	0.7163	0.4496	0.4349	0.4366	0.44	0.7	0.44	0.46	0.4819	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.374621	NA	NA	0.485	0.431457	NA	0.493	NA	5.2623666
1126	16	53503934	53503934	G	A	exonic	RBL2	NA	synonymous SNV	RBL2:NM_005611:exon15:c.G2082A:p.T694T	exonic	ENSG00000103479	NA	synonymous SNV	ENSG00000103479:ENST00000262133:exon15:c.G2082A:p.T694T,ENSG00000103479:ENST00000544405:exon15:c.G1860A:p.T620T	NA	NA	16q12.2	NA	Name=CTCF	NA	NA	rs1131220	0.46	0.46	0.48	0.505391	0.4662	0.1786	0.4049	0.8517	0.4857	0.45	0.15	0.45	0.82	0.4525	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.251622	NA	NA	0.485698	0.769336	NA	0.623	NA	5.2622686
1126	19	56424532	56424532	G	A	exonic	NLRP13	NA	synonymous SNV	NLRP13:NM_176810:exon5:c.C651T:p.R217R	exonic	ENSG00000173572	NA	synonymous SNV	ENSG00000173572:ENST00000342929:exon5:c.C651T:p.R217R,ENSG00000173572:ENST00000588751:exon5:c.C651T:p.R217R	NA	NA	19q13.43	NA	NA	NA	NA	rs731338	0.12	0.12	0.084	0.107827	0.1342	0.1746	0.1412	0.0091	0.1217	0.13	0.17	0.16	0.01	0.1226	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.281862	NA	NA	0.147791	0.026782	NA	0.051	NA	5.2620756
1126	16	70068086	70068086	G	C	ncRNA_exonic	PDXDC2P	NA	NA	NA	ncRNA_exonic	ENSG00000196696,ENSG00000255185	NA	NA	NA	Score=635;Name=lod=509	NA	16q22.1	NA	NA	NA	NA	rs2287967	0.22	0.22	0.142	0.185503	0.4046	0.0833	0.3242	0.0227	0.1871	0.39	0.09	0.32	0.02	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.980562	NA	0.05	NA	NA	NA	0.007	NA	5.2620666
1126	20	62703490	62703490	C	T	intronic	TCEA2	NA	NA	NA	intronic	ENSG00000171703	NA	NA	NA	NA	NA	20q13.33	NA	Name=EBF	Name=4	NA	rs13039439	0.2	0.2	0.181	0.19349	0.2445	0.2242	0.2205	0.0756	0.2495	0.24	0.25	0.23	0.07	0.238	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.130224	NA	NA	0.255814	0.103041	NA	0.152	NA	5.261686
1126	14	65007547	65007547	G	T	UTR5	HSPA2	NM_021979:c.-21G>T	NA	NA	UTR5	ENSG00000126803	ENST00000247207:c.-21G>T	NA	NA	NA	NA	14q23.3	NA	Name=TAF1,NRSF,Pol2,Pol2(b),Pol2-4H8,SETDB1,TBP	NA	NA	rs17101919	0.02	0.02	0.013	0.0139776	0.0239	0.001	0.013	0.0204	0.0092	0.02	0.0017	0.01	0.02	0.0233	0.029	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.502632	NA	NA	0.024651	0.029051	NA	0.007	NA	5.2614824
1126	10	102798346	102798346	T	C	intronic	SFXN3	NA	NA	NA	intronic	ENSG00000107819	NA	NA	NA	NA	NA	10q24.31	NA	Name=CTCF,CTCF_(SC-5916),ZBTB7A_(SC-34508)	Name=2	NA	rs807049	0.26	0.26	0.24	0.269369	0.3608	0.0179	0.317	0.3442	0.2996	0.36	0.02	0.32	0.35	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.571319	NA	NA	0.37775	0.358382	NA	0.275	NA	5.26145
1126	19	46289509	46289509	G	A	exonic	DMWD	NA	synonymous SNV	DMWD:NM_004943:exon3:c.C1245T:p.G415G	exonic	ENSG00000185800	NA	synonymous SNV	ENSG00000185800:ENST00000270223:exon3:c.C1245T:p.G415G,ENSG00000185800:ENST00000377735:exon3:c.C1245T:p.G415G	NA	NA	19q13.32	NA	NA	NA	NA	rs11545326	0.09	0.09	0.093	0.0822684	0.162	0.0407	0.111	0.0045	0.1278	0.16	0.05	0.13	0.01	0.116	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.419542	NA	NA	0.127442	0.021981	NA	0.058	NA	5.2612246
1126	11	63885287	63885287	C	T	exonic	FLRT1	NA	synonymous SNV	FLRT1:NM_013280:exon2:c.C1548T:p.Y516Y	exonic	ENSG00000126500	NA	synonymous SNV	ENSG00000126500:ENST00000246841:exon2:c.C1548T:p.Y516Y	NA	NA	11q13.1	NA	NA	NA	NA	rs947939	0.09	0.09	0.083	0.0692891	0.1392	0.0675	0.0821	0.0121	0.0675	0.14	0.08	0.09	0.01	0.1127	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.879144	NA	NA	0.153596	0.036347	NA	0.109	NA	5.2611706
1126	19	41281346	41281346	C	T	UTR5	MIA	NM_006533:c.-102C>T	NA	NA	UTR5	ENSG00000261857	ENST00000263369:c.-102C>T	NA	NA	NA	NA	19q13.2	Score=860;Name=V$EVI1_02	NA	NA	NA	rs2233154	0.14	0.14	0.14	0.122204	0.0726	0.2083	0.0648	0.1732	0.0562	0.07	0.24	0.08	0.18	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.020381	NA	NA	NA	NA	NA	0.072	NA	5.2607334
1126	4	99330826	99330826	T	C	intronic	RAP1GDS1	NA	NA	NA	ncRNA_exonic	ENSG00000242318	NA	NA	NA	Score=607;Name=lod=389	NA	4q23	NA	NA	NA	NA	rs28411105	0.14	0.14	0.132	0.153954	0.0726	0.0397	0.1945	0.3389	0.0767	0.07	0.05	0.19	0.32	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.261819	NA	NA	NA	NA	NA	0.145	NA	5.2607333
1126	12	9833628	9833628	C	T	exonic	CLEC2D	NA	synonymous SNV	CLEC2D:NM_001004419:exon2:c.C171T:p.S57S,CLEC2D:NM_001197318:exon2:c.C171T:p.S57S,CLEC2D:NM_013269:exon2:c.C171T:p.S57S	exonic	ENSG00000069493	NA	synonymous SNV	ENSG00000069493:ENST00000430909:exon1:c.C108T:p.S36S,ENSG00000069493:ENST00000544322:exon1:c.C93T:p.S31S,ENSG00000069493:ENST00000261340:exon2:c.C171T:p.S57S,ENSG00000069493:ENST00000290855:exon2:c.C171T:p.S57S,ENSG00000069493:ENST00000325960:exon2:c.C171T:p.S57S,ENSG00000069493:ENST00000444971:exon2:c.C171T:p.S57S,ENSG00000069493:ENST00000476198:exon2:c.C45T:p.S15S,ENSG00000069493:ENST00000479877:exon2:c.C171T:p.S57S,ENSG00000069493:ENST00000536355:exon2:c.C45T:p.S15S,ENSG00000069493:ENST00000543300:exon2:c.C171T:p.S57S,ENSG00000069493:ENST00000479410:exon3:c.C45T:p.S15S	NA	Name=Type 1 diabetes	12p13.31	NA	NA	NA	NA	rs3764021	0.47	0.47	0.475	0.464657	0.4692	0.371	0.4092	0.5635	0.4622	0.47	0.35	0.49	0.59	0.4628	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.677908	NA	NA	0.474058	0.54564	ID=COSM1365022,COSM1365021;OCCURENCE=2(large_intestine)	0.587	NA	5.2606086
1126	1	15905501	15905501	G	A	exonic	AGMAT	NA	synonymous SNV	AGMAT:NM_024758:exon4:c.C573T:p.T191T	exonic	ENSG00000116771	NA	synonymous SNV	ENSG00000116771:ENST00000375826:exon4:c.C573T:p.T191T	NA	NA	1p36.21	NA	NA	NA	NA	rs41270261	0.1	0.1	0.095	0.0922524	0.1421	0.0308	0.1124	0.087	0.0971	0.14	0.03	0.14	0.08	0.1231	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.136101	NA	NA	0.14093	0.091012	ID=COSM1335380;OCCURENCE=1(large_intestine)	0.065	NA	5.2605366
1126	17	79182778	79182778	T	C	exonic	AZI1	NA	synonymous SNV	AZI1:NM_001009811:exon3:c.A222G:p.R74R,AZI1:NM_014984:exon3:c.A222G:p.R74R	exonic	ENSG00000141577	NA	synonymous SNV	ENSG00000141577:ENST00000269392:exon3:c.A222G:p.R74R,ENSG00000141577:ENST00000374782:exon3:c.A222G:p.R74R,ENSG00000141577:ENST00000450824:exon3:c.A222G:p.R74R,ENSG00000141577:ENST00000575907:exon3:c.A222G:p.R74R	Score=431;Name=lod=75	NA	17q25.3	NA	NA	NA	NA	rs62075318	0.43	0.43	0.372	0.41853	0.4443	0.626	0.6095	0.0227	0.5777	0.46	0.63	0.59	0.05	0.4904	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.675456	NA	NA	0.472209	0.100318	ID=COSM1480156,COSM437766;OCCURENCE=2(breast)	0.355	NA	5.2597576
1126	3	126207222	126207222	A	G	intronic	UROC1	NA	NA	NA	intronic	ENSG00000159650	NA	NA	NA	NA	NA	3q21.3	NA	Name=Pol2,CTCF,c-Myc	Name=11	NA	rs777483	0.65	0.65	0.617	0.641973	0.7406	0.5873	0.6153	0.559	0.728	0.74	0.59	0.67	0.55	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.049012	NA	NA	NA	NA	NA	0.681	NA	5.2594
1126	11	15096419	15096419	C	T	intronic	CALCB	NA	NA	NA	intronic	ENSG00000175868	NA	NA	NA	NA	NA	11p15.2	NA	Name=CTCFL_(SC-98982),TCF4,ELF1_(SC-631),CTCF,KAP1,HA-E2F1	Name=137	NA	rs1540139	0.72	0.72	0.722	0.708067	0.7406	0.8492	0.549	0.652	0.7178	0.74	0.82	0.58	0.66	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.193279	2.193279	NA	NA	NA	NA	0.703	NA	5.2594
1126	8	92170649	92170649	A	G	intronic	LRRC69	NA	NA	NA	ncRNA_exonic	ENSG00000253525	NA	NA	NA	NA	NA	8q21.3	NA	NA	Name=15	NA	rs61733744	0.04	0.04	0.031	0.0311502	0.0746	0.003	0.0432	0.0076	0.0389	0.07	0.0035	0.04	0.01	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2947	NA	NA	NA	NA	NA	0.029	NA	5.2587333
1126	22	44079645	44079645	T	C	exonic	EFCAB6	NA	synonymous SNV	EFCAB6:NM_198856:exon10:c.A777G:p.A259A,EFCAB6:NM_022785:exon12:c.A1233G:p.A411A	exonic	ENSG00000186976	NA	synonymous SNV	ENSG00000186976:ENST00000396231:exon10:c.A777G:p.A259A,ENSG00000186976:ENST00000262726:exon12:c.A1233G:p.A411A	NA	NA	22q13.2	NA	NA	NA	NA	rs8141450	0.08	0.08	0.069	0.0808706	0.1481	0.0327	0.0807	0.0083	0.1595	0.16	0.03	0.09	0.01	0.1195	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.155141	NA	NA	0.140698	0.027009	ID=COSM149306;OCCURENCE=1(stomach)	0.094	NA	5.2583686
1126	4	70156392	70156392	A	G	exonic	UGT2B28	NA	synonymous SNV	UGT2B28:NM_053039:exon5:c.A1173G:p.V391V	exonic	ENSG00000135226	NA	synonymous SNV	ENSG00000135226:ENST00000335568:exon5:c.A1173G:p.V391V	Score=543;Name=lod=215	NA	4q13.2	NA	NA	NA	NA	rs10013145	0.35	0.35	0.349	0.389377	0.4781	0.3829	0.4582	0.3079	0.3661	0.43	0.34	0.4	0.21	0.4817	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.599476	NA	NA	0.449008	0.327889	NA	0.239	NA	5.2578586
1126	11	69251982	69251982	C	T	intergenic	MYEOV,CCND1	dist=187228;dist=203891	NA	NA	intergenic	ENSG00000255980,ENSG00000255606	dist=7593;dist=1151	NA	NA	NA	NA	11q13.3	NA	Name=USF2,Mxi1_(bHLH),SMC3_(ab9263),Max,GR,CTCF,p300,BHLHE40,CEBPB,AP-2alpha,FOXA1_(C-20),ERalpha_a,c-Myc,AP-2gamma	Name=56	NA	rs77247065	0.05	0.05	0.048	0.0563099	0.0755	0.0248	0.0519	0.0484	0.0828	0.06	0.02	0.05	0.07	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.588329	NA	NA	NA	NA	NA	0.043	NA	5.2578334
1126	12	18846646	18846646	G	C	intronic	PLCZ1	NA	NA	NA	ncRNA_exonic	ENSG00000255993	NA	NA	NA	Score=847;Name=lod=3675	NA	12p12.3	NA	NA	NA	NA	rs116981455	0.04	0.04	0.039	0.0249601	0.0755	0.001	0.0346	0.0045	0.0184	0.09	NA	0.03	0.01	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.42673	NA	NA	NA	NA	NA	0.094	NA	5.2578333
1126	17	74222347	74222347	C	G	intronic	RNF157	NA	NA	NA	ncRNA_exonic	ENSG00000228218	NA	NA	NA	Score=440;Name=lod=82	NA	17q25.1	NA	NA	NA	NA	rs6501867	0.12	0.12	0.096	0.146765	0.0755	0.003	0.2075	0.298	0.1207	0.07	0.0017	0.18	0.27	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.6492	1.6492	NA	NA	NA	NA	0.203	NA	5.2578333
1126	6	25773809	25773809	A	G	exonic	SLC17A4	NA	synonymous SNV	SLC17A4:NM_005495:exon8:c.A894G:p.L298L	exonic	ENSG00000146039	NA	synonymous SNV	ENSG00000146039:ENST00000397076:exon4:c.A204G:p.L68L,ENSG00000146039:ENST00000377905:exon8:c.A894G:p.L298L	NA	NA	6p22.2	NA	NA	NA	NA	rs2275906	0.08	0.08	0.078	0.096845	0.1421	0.0546	0.111	0.0295	0.1748	0.12	0.05	0.12	0.02	0.1224	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.986262	1.986262	NA	0.145465	0.04108	NA	0.101	NA	5.2567016
1126	8	134144113	134144113	C	T	exonic	TG	NA	synonymous SNV	TG:NM_003235:exon46:c.C7920T:p.Y2640Y	exonic	ENSG00000042832	NA	synonymous SNV	ENSG00000042832:ENST00000519543:exon17:c.C2319T:p.Y773Y,ENSG00000042832:ENST00000542445:exon25:c.C3030T:p.Y1010Y,ENSG00000042832:ENST00000377869:exon45:c.C7749T:p.Y2583Y,ENSG00000042832:ENST00000220616:exon46:c.C7920T:p.Y2640Y	NA	NA	8q24.22	NA	NA	NA	NA	rs2294024	0.42	0.42	0.434	0.405351	0.4841	0.1657	0.4928	0.5885	0.2618	0.48	0.17	0.53	0.56	0.4335	0.58	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	.	.	.	.	.	0.439	6.383	0.051	0.254	-0.075	4.892	0.438787	NA	NA	0.492791	0.575579	ID=COSM150551;OCCURENCE=1(stomach)	0.391	NA	5.2562756
1126	7	75442759	75442759	G	A	intronic	CCL24	NA	NA	NA	intronic	ENSG00000106178	NA	NA	NA	NA	NA	7q11.23	Score=830;Name=V$HTF_01	NA	Name=15	NA	rs2302005	0.36	0.36	0.326	0.355631	0.2336	0.6329	0.4236	0.2307	0.316	0.24	0.64	0.36	0.24	0.2935	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.410458	NA	NA	0.216977	0.240354	NA	0.406	NA	5.255923
1126	10	102008483	102008483	A	G	intronic	CWF19L1	NA	NA	NA	ncRNA_exonic	ENSG00000230224	NA	NA	NA	Score=783;Name=lod=2026	NA	10q24.31	NA	NA	NA	NA	rs7082753	0.2	0.2	0.202	0.238219	0.0775	0.1419	0.1239	0.5552	0.1554	0.09	0.15	0.12	0.49	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.063748	NA	NA	NA	NA	NA	0.167	NA	5.2558333
1126	15	22413825	22413825	C	T	ncRNA_exonic	OR4N3P	NA	NA	NA	ncRNA_exonic	ENSG00000259435	NA	NA	NA	Score=456;Name=lod=95	NA	15q11.2	NA	NA	NA	NA	rs267613	NA	NA	0.308	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4109	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.071499	NA	NA	NA	NA	ID=COSN164865;OCCURENCE=1(NS)	0.297	NA	5.2557666
1126	22	32756744	32756744	A	G	exonic	RFPL3	NA	synonymous SNV	RFPL3:NM_001098535:exon2:c.A879G:p.Q293Q,RFPL3:NM_006604:exon3:c.A792G:p.Q264Q	exonic	ENSG00000128276,ENSG00000205853	NA	synonymous SNV	ENSG00000128276:ENST00000249007:exon2:c.A879G:p.Q293Q,ENSG00000128276:ENST00000382088:exon2:c.A792G:p.Q264Q,ENSG00000128276:ENST00000397468:exon3:c.A792G:p.Q264Q,ENSG00000205853:ENST00000382084:exon4:c.T207C:p.P69P,ENSG00000205853:ENST00000400234:exon5:c.T294C:p.P98P	NA	NA	22q12.3	NA	NA	NA	NA	rs2076035	0.5	0.5	0.46	NA	NA	NA	NA	NA	NA	0.4	0.51	0.48	0.67	0.4109	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.295329	NA	0.07	NA	NA	NA	0.623	NA	5.2557666
1126	1	207510596	207510596	G	A	intronic	CD55	NA	NA	NA	intronic	ENSG00000196352	NA	NA	NA	NA	NA	1q32.2	NA	Name=TBP,CEBPB,BATF,CHD2_(N-1250),EBF1_(C-8),TCF12,Oct-2,GR,STAT1,FOXA1_(SC-101058),NFKB,BCL11A,Pol2-4H8,IRF4_(M-17),Pol2,SP1,RFX5_(N-494),Pol2(phosphoS2),SMC3_(ab9263),FOXA1_(C-20),POU2F2,JunD,EBF	Name=86	NA	rs10746463	0.66	0.66	0.658	0.621605	0.7445	0.4107	0.7032	0.6967	0.5532	0.74	0.47	0.7	0.7	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.651786	NA	NA	NA	NA	NA	0.725	NA	5.2555
1127	1	214787130	214787130	G	A	exonic	CENPF	NA	synonymous SNV	CENPF:NM_016343:exon2:c.G33A:p.G11G	exonic	ENSG00000117724	NA	synonymous SNV	ENSG00000117724:ENST00000366955:exon2:c.G33A:p.G11G	Score=562;Name=lod=257	NA	1q41	NA	NA	NA	NA	rs2070064	0.27	0.27	0.253	0.236222	0.499	0.121	0.3156	0.0522	0.2771	0.49	0.11	0.35	0.07	0.3957	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.093948	3.093948	NA	0.517442	0.119156	ID=COSM425275;OCCURENCE=1(breast)	0.326	NA	5.2545246
1127	1	236647736	236647736	C	T	UTR3	EDARADD	NM_145861:c.*1787C>T,NM_080738:c.*1787C>T	NA	NA	ncRNA_exonic	ENSG00000244457	NA	NA	NA	Score=795;Name=lod=2274	NA	1q43	NA	NA	NA	NA	rs6428955	0.15	0.15	0.136	0.13778	0.2455	0.0417	0.2017	0.0272	0.2301	0.25	0.05	0.22	0.04	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.206567	NA	NA	NA	NA	NA	0.159	NA	5.2545
1127	11	122888570	122888570	G	T	ncRNA_exonic	LOC341056	NA	NA	NA	ncRNA_exonic	ENSG00000213184	NA	NA	NA	Score=669;Name=lod=699	NA	11q24.1	NA	NA	NA	NA	rs7933723	0.2	0.2	0.176	0.166733	0.4125	0.003	0.2219	0.0582	0.1902	0.4	0.01	0.26	0.06	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.095	NA	NA	NA	NA	NA	0.275	NA	5.2541666
1127	3	9876987	9876987	G	A	exonic	TTLL3	NA	synonymous SNV	TTLL3:NM_001025930:exon13:c.G2562A:p.R854R	exonic	ENSG00000214021	NA	synonymous SNV	ENSG00000214021:ENST00000426895:exon13:c.G2562A:p.R854R,ENSG00000214021:ENST00000547186:exon13:c.G2133A:p.R711R	NA	NA	3p25.3	NA	NA	NA	NA	rs1057281	0.13	0.13	0.115	0.11901	0.1183	0.0565	0.1009	0.211	0.0726	0.13	0.06	0.11	0.23	0.1391	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.078172	NA	NA	0.155656	0.192761	NA	0.116	NA	5.2536106
1127	1	156760887	156760887	C	A	intronic	PRCC	NA	NA	NA	exonic	ENSG00000143294	NA	unknown	UNKNOWN	NA	NA	1q23.1	NA	NA	NA	NA	rs11264554	0.41	0.41	0.391	0.348442	0.4264	0.7282	0.3602	0.0408	0.2843	0.42	0.71	0.4	0.06	0.4084	0.71	0.02	D	.	.	.	.	.	.	1.000	P	.	.	.	.	-1.024	T	0.047	T	0.1	1.114	9.544	-0.597	0.008	-0.309	3.268	1.114047	NA	0	0.411602	0.11016	NA	0.319	NA	5.253598
1127	15	79019578	79019578	G	T	intergenic	CHRNB4,LOC646938	dist=85991;dist=24801	NA	NA	ncRNA_exonic	ENSG00000261303	NA	NA	NA	Score=409;Name=lod=61	NA	15q25.1	NA	Name=TBP,Pol2-4H8,Pol2	NA	NA	rs899997	0.54	0.54	0.483	0.480032	0.7465	0.4722	0.6225	0.1747	0.5256	0.74	0.5	0.61	0.22	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.973607	NA	NA	NA	NA	NA	0.623	NA	5.2535
1127	19	21838492	21838492	C	G	intergenic	ZNF429,ZNF100	dist=117413;dist=68351	NA	NA	ncRNA_exonic	ENSG00000268278	NA	NA	NA	Score=441;Name=lod=83	NA	19p12	NA	Name=ZNF274	NA	NA	rs6511280	0.65	0.65	0.603	0.623802	0.7465	0.7202	0.7233	0.3601	0.684	0.75	0.71	0.74	0.38	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.441474	NA	0.01	NA	NA	NA	0.696	NA	5.2535
1127	19	21838565	21838565	T	C	intergenic	ZNF429,ZNF100	dist=117486;dist=68278	NA	NA	ncRNA_exonic	ENSG00000268278	NA	NA	NA	Score=423;Name=lod=70	NA	19p12	NA	Name=KAP1,ZNF274	NA	NA	rs6511281	0.65	0.65	0.604	0.624002	0.7465	0.7202	0.7233	0.3601	0.6851	0.75	0.71	0.74	0.38	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.417596	NA	1	NA	NA	NA	0.638	NA	5.2535
1127	2	87157790	87157790	C	G	intronic	RGPD1,RGPD2	NA	NA	NA	ncRNA_exonic	ENSG00000231351	NA	NA	NA	Score=640;Name=lod=533	NA	2p11.2	NA	NA	NA	NA	rs149973466	0.16	0.16	0.103	0.195288	0.0805	0.0218	0.0951	0.556	0.0757	0.07	0.03	0.1	0.5	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.217574	NA	NA	NA	NA	NA	NA	NA	5.2528333
1127	8	4645351	4645351	T	G	intronic	CSMD1	NA	NA	NA	ncRNA_exonic	ENSG00000254244	NA	NA	NA	Score=503;Name=lod=148	NA	8p23.2	NA	NA	NA	NA	rs10503283	0.12	0.12	0.106	0.110423	0.0805	0.252	0.1066	0.0295	0.1074	0.08	0.26	0.08	0.04	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.583525	NA	NA	NA	NA	NA	0.065	NA	5.2528333
1127	9	108521693	108521693	A	G	intronic	TMEM38B	NA	NA	NA	ncRNA_exonic	ENSG00000232486	NA	NA	NA	Score=566;Name=lod=265	NA	9q31.2	NA	NA	NA	NA	rs10759135	0.21	0.21	0.207	0.209665	0.0805	0.4395	0.2104	0.1921	0.1288	0.08	0.42	0.18	0.21	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.306355	NA	NA	NA	NA	NA	0.181	NA	5.2528333
1127	12	53647373	53647373	T	C	exonic	MFSD5	NA	synonymous SNV	MFSD5:NM_001170790:exon2:c.T1075C:p.L359L,MFSD5:NM_032889:exon2:c.T754C:p.L252L	exonic	ENSG00000182544	NA	synonymous SNV	ENSG00000182544:ENST00000329548:exon2:c.T754C:p.L252L,ENSG00000182544:ENST00000534842:exon2:c.T1075C:p.L359L,ENSG00000182544:ENST00000551660:exon2:c.T1075C:p.L359L	Score=619;Name=lod=439	NA	12q13.13	NA	NA	NA	NA	rs10876422	0.44	0.44	0.42	0.463259	0.4632	0.5972	0.4135	0.2625	0.6319	0.44	0.58	0.44	0.29	0.481	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.393024	NA	NA	0.469651	0.302315	NA	0.413	NA	5.2528156
1127	19	43383680	43383680	G	T	exonic	PSG1	NA	synonymous SNV	PSG1:NM_001184825:exon1:c.C54A:p.L18L,PSG1:NM_001184826:exon1:c.C54A:p.L18L,PSG1:NM_006905:exon1:c.C54A:p.L18L	exonic	ENSG00000231924	NA	synonymous SNV	ENSG00000231924:ENST00000244296:exon1:c.C54A:p.L18L,ENSG00000231924:ENST00000312439:exon1:c.C54A:p.L18L,ENSG00000231924:ENST00000403380:exon1:c.C54A:p.L18L,ENSG00000231924:ENST00000436291:exon1:c.C54A:p.L18L,ENSG00000231924:ENST00000595124:exon1:c.C54A:p.L18L,ENSG00000231924:ENST00000595356:exon1:c.C54A:p.L18L	NA	NA	19q13.2	NA	NA	NA	NA	rs1141653	0.27	0.27	0.232	0.326078	0.1014	0.4167	0.2046	0.4614	0.3671	0.1	0.4	0.16	0.45	0.2067	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.16292	NA	NA	0.106391	0.422185	NA	0.283	NA	5.2521756
1127	19	15233581	15233581	C	A	exonic	ILVBL	NA	synonymous SNV	ILVBL:NM_006844:exon6:c.G639T:p.L213L	exonic	ENSG00000105135	NA	synonymous SNV	ENSG00000105135:ENST00000527093:exon5:c.G639T:p.L213L,ENSG00000105135:ENST00000534378:exon5:c.G318T:p.L106L,ENSG00000105135:ENST00000600984:exon5:c.G318T:p.L106L,ENSG00000105135:ENST00000263383:exon6:c.G639T:p.L213L	Score=493;Name=lod=134	NA	19p13.12	NA	NA	NA	NA	rs2074265	0.55	0.55	0.559	0.556909	0.4473	0.5635	0.4078	0.7519	0.5051	0.46	0.56	0.42	0.75	0.4929	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.557298	NA	NA	0.474302	0.721743	NA	0.522	NA	5.2521646
1127	10	115370254	115370254	A	G	exonic	NRAP	NA	synonymous SNV	NRAP:NM_006175:exon30:c.T3462C:p.I1154I,NRAP:NM_001261463:exon31:c.T3567C:p.I1189I,NRAP:NM_198060:exon31:c.T3567C:p.I1189I	exonic	ENSG00000197893	NA	synonymous SNV	ENSG00000197893:ENST00000360478:exon30:c.T3462C:p.I1154I,ENSG00000197893:ENST00000369360:exon30:c.T3486C:p.I1162I,ENSG00000197893:ENST00000359988:exon31:c.T3567C:p.I1189I,ENSG00000197893:ENST00000369358:exon31:c.T3591C:p.I1197I	Score=450;Name=lod=90	NA	10q25.3	NA	NA	NA	NA	rs12243176	0.46	0.46	0.436	0.469449	0.4652	0.6032	0.4669	0.354	0.4939	0.44	0.57	0.48	0.34	0.4649	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.151323	NA	NA	0.484419	0.360191	NA	0.377	NA	5.2521476
1127	12	48882013	48882013	G	A	intronic	C12orf54	NA	NA	NA	ncRNA_exonic	ENSG00000240443	NA	NA	NA	Score=739;Name=lod=1339	NA	12q13.11	NA	NA	NA	NA	rs4265629	0.28	0.28	0.21	0.288938	0.0815	0.6548	0.3357	0.1543	0.274	0.09	0.63	0.3	0.14	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.806318	NA	NA	NA	NA	NA	0.174	NA	5.2518333
1127	17	18574998	18574998	A	T	ncRNA_exonic	FOXO3B	NA	NA	NA	ncRNA_exonic	ENSG00000240445	NA	NA	NA	Score=304;Name=lod=23	NA	17p11.2	NA	NA	NA	NA	rs9635701	0.37	0.37	0.379	0.315695	0.4155	0.3889	0.4496	0.1982	0.2014	0.42	0.38	0.43	0.24	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.257555	NA	NA	NA	NA	NA	0.42	NA	5.2511666
1127	11	6243804	6243804	A	G	exonic	FAM160A2	NA	synonymous SNV	FAM160A2:NM_001098794:exon6:c.T1059C:p.Y353Y,FAM160A2:NM_032127:exon6:c.T1059C:p.Y353Y	exonic	ENSG00000051009	NA	synonymous SNV	ENSG00000051009:ENST00000265978:exon6:c.T1059C:p.Y353Y,ENSG00000051009:ENST00000449352:exon6:c.T1059C:p.Y353Y,ENSG00000051009:ENST00000524416:exon6:c.T1059C:p.Y353Y	Score=724;Name=lod=1170	NA	11p15.4	Score=887;Name=V$GATA1_02	NA	NA	NA	rs3750945	0.75	0.75	0.741	0.728035	0.8161	0.9593	0.8055	0.3555	0.8476	0.81	0.96	0.84	0.36	0.7924	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.942249	NA	NA	0.807612	0.417765	NA	0.746	NA	5.2505546
1127	16	3451881	3451881	C	T	UTR5	ZNF174	NM_003450:c.-124C>T,NM_001032292:c.-124C>T	NA	NA	ncRNA_UTR5	ENSG00000103343	NA	NA	NA	NA	NA	16p13.3	NA	NA	Name=11	NA	rs37810	0.22	0.22	0.183	0.229233	0.2495	0.1319	0.2176	0.2769	0.2526	0.25	0.13	0.23	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.89885	NA	NA	NA	NA	NA	0.377	NA	5.2505
1127	3	129826100	129826100	C	T	ncRNA_intronic	FAM86HP	NA	NA	NA	ncRNA_exonic	ENSG00000253540	NA	NA	NA	Score=378;Name=lod=46	NA	3q22.1	NA	NA	NA	NA	rs7428344	0.3	0.3	0.256	0.298722	0.4165	0.248	0.3545	0.1755	0.3569	0.4	0.22	0.39	0.17	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.034642	NA	NA	NA	NA	NA	0.326	NA	5.2501666
1127	17	18575140	18575140	A	G	ncRNA_exonic	FOXO3B	NA	NA	NA	ncRNA_exonic	ENSG00000240445	NA	NA	NA	Score=653;Name=lod=602	NA	17p11.2	NA	NA	NA	NA	rs9635681	0.29	0.29	0.208	0.34984	0.4165	0.3879	0.4597	0.3222	0.2014	0.31	0.23	0.34	0.29	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.166883	NA	NA	NA	NA	NA	0.217	NA	5.2501666
1127	19	2732986	2732986	T	C	exonic	SLC39A3	NA	synonymous SNV	SLC39A3:NM_144564:exon3:c.A708G:p.V236V	exonic	ENSG00000141873	NA	synonymous SNV	ENSG00000141873:ENST00000269740:exon3:c.A708G:p.V236V,ENSG00000141873:ENST00000545664:exon3:c.A708G:p.V236V	Score=439;Name=lod=81	NA	19p13.3	NA	NA	NA	NA	rs759073	0.58	0.58	0.608	0.625399	0.4414	0.6468	0.3905	0.907	0.5787	0.42	0.67	0.38	0.87	0.5234	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.539069	NA	NA	0.451714	0.836144	ID=COSM439145;OCCURENCE=1(breast)	0.529	NA	5.2501526
1127	1	19202896	19202896	G	A	exonic	ALDH4A1	NA	synonymous SNV	ALDH4A1:NM_001161504:exon12:c.C1071T:p.A357A,ALDH4A1:NM_003748:exon12:c.C1251T:p.A417A,ALDH4A1:NM_170726:exon12:c.C1251T:p.A417A	exonic	ENSG00000159423	NA	synonymous SNV	ENSG00000159423:ENST00000290597:exon12:c.C1251T:p.A417A,ENSG00000159423:ENST00000375341:exon12:c.C1251T:p.A417A,ENSG00000159423:ENST00000538309:exon12:c.C1071T:p.A357A	NA	NA	1p36.13	Score=769;Name=V$MYOGNF1_01	NA	NA	NA	rs2230707	0.52	0.52	0.463	0.515974	0.4453	0.6002	0.6513	0.4569	0.4857	0.45	0.63	0.61	0.46	0.5069	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.554647	1.554647	NA	0.464767	0.435089	NA	0.522	NA	5.2496996
1127	19	2733250	2733250	C	T	exonic	SLC39A3	NA	synonymous SNV	SLC39A3:NM_144564:exon3:c.G444A:p.V148V	exonic	ENSG00000141873	NA	synonymous SNV	ENSG00000141873:ENST00000269740:exon3:c.G444A:p.V148V,ENSG00000141873:ENST00000545664:exon3:c.G444A:p.V148V	NA	NA	19p13.3	NA	NA	NA	NA	rs61736898	0.1	0.1	0.093	0.101438	0.1471	0.0268	0.0836	0.1399	0.092	0.15	0.02	0.08	0.13	0.1307	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.032292	NA	NA	0.139279	0.14808	NA	0.138	NA	5.2495876
1127	17	18575127	18575127	G	A	ncRNA_exonic	FOXO3B	NA	NA	NA	ncRNA_exonic	ENSG00000240445	NA	NA	NA	Score=653;Name=lod=602	NA	17p11.2	NA	NA	NA	NA	rs9635680	0.37	0.37	0.336	0.41254	0.4175	0.3899	0.4683	0.553	0.2014	0.34	0.28	0.36	0.52	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.021843	NA	NA	NA	NA	NA	0.297	NA	5.2491666
1127	17	18575675	18575675	T	G	ncRNA_exonic	FOXO3B	NA	NA	NA	ncRNA_exonic	ENSG00000240445	NA	NA	NA	Score=670;Name=lod=706	NA	17p11.2	NA	NA	NA	NA	rs55797270	0.45	0.45	0.337	0.41274	0.4175	0.3889	0.4683	0.5545	0.2014	0.42	0.38	0.45	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.301808	NA	NA	NA	NA	NA	0.464	NA	5.2491666
1127	7	1097394	1097394	T	C	exonic	GPR146	NA	synonymous SNV	GPR146:NM_138445:exon1:c.T243C:p.P81P	exonic	ENSG00000164849	NA	synonymous SNV	ENSG00000164849:ENST00000297468:exon1:c.T243C:p.P81P,ENSG00000164849:ENST00000397095:exon2:c.T243C:p.P81P,ENSG00000164849:ENST00000444847:exon2:c.T243C:p.P81P	NA	NA	7p22.3	NA	NA	NA	NA	rs11767527	0.07	0.07	0.064	0.0688898	0.1262	NA	0.0821	0.0204	0.137	0.13	NA	0.09	0.02	0.1356	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.875063	NA	NA	0.155734	0.045455	ID=COSM329380;OCCURENCE=1(breast),2(haematopoietic_and_lymphoid_tissue)	0.13	NA	5.2491326
1127	17	49713300	49713300	G	A	exonic	CA10	NA	synonymous SNV	CA10:NM_020178:exon7:c.C705T:p.Y235Y,CA10:NM_001082533:exon8:c.C705T:p.Y235Y,CA10:NM_001082534:exon8:c.C705T:p.Y235Y	exonic	ENSG00000154975	NA	synonymous SNV	ENSG00000154975:ENST00000451037:exon7:c.C705T:p.Y235Y,ENSG00000154975:ENST00000570565:exon7:c.C480T:p.Y160Y,ENSG00000154975:ENST00000285273:exon8:c.C705T:p.Y235Y,ENSG00000154975:ENST00000340813:exon8:c.C723T:p.Y241Y,ENSG00000154975:ENST00000442502:exon8:c.C705T:p.Y235Y,ENSG00000154975:ENST00000575181:exon8:c.C705T:p.Y235Y	NA	NA	17q21.33	Score=799;Name=V$PAX2_01	NA	NA	NA	rs11870209	0.39	0.39	0.38	0.364018	0.4911	0.3442	0.4496	0.2481	0.3497	0.49	0.34	0.46	0.23	0.4424	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.62374	NA	NA	0.484302	0.279392	ID=COSM148301;OCCURENCE=1(breast),1(stomach)	0.428	NA	5.2488646
1127	3	72978434	72978434	T	C	intronic	GXYLT2	NA	NA	NA	ncRNA_exonic	ENSG00000242960	NA	NA	NA	Score=734;Name=lod=1281	NA	3p13	NA	NA	NA	NA	rs111644690	0.14	0.14	0.148	0.173522	0.0845	0.2808	0.0648	0.1415	0.2751	0.09	0.27	0.07	0.14	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.398258	1.398258	NA	NA	NA	NA	0.181	NA	5.2488333
1127	16	83781919	83781919	T	C	intronic	CDH13	NA	NA	NA	ncRNA_intronic	ENSG00000260788	NA	NA	NA	NA	NA	16q23.3	NA	Name=FOXA1_(C-20)	NA	NA	rs889490	0.14	0.14	0.147	0.176717	0.0845	0.0149	0.0735	0.4448	0.1493	0.09	0.02	0.07	0.42	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.385761	NA	NA	NA	NA	NA	0.174	NA	5.2488333
1127	5	35954588	35954588	C	T	intronic	UGT3A1	NA	NA	NA	intronic	ENSG00000145626	NA	NA	NA	NA	NA	5p13.2	NA	Name=CTCF	Name=4	NA	rs700164	0.32	0.32	0.292	0.330871	0.2366	0.6548	0.4078	0.034	0.4407	0.23	0.64	0.34	0.06	0.2975	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.521513	NA	NA	0.217093	0.075806	NA	0.217	NA	5.248807
1127	10	30317838	30317838	A	G	exonic	KIAA1462	NA	synonymous SNV	KIAA1462:NM_020848:exon3:c.T1239C:p.P413P	exonic	ENSG00000165757	NA	synonymous SNV	ENSG00000165757:ENST00000375377:exon3:c.T1239C:p.P413P	NA	NA	10p11.23	NA	NA	Name=12	NA	rs7920686	0.52	0.52	0.539	0.523363	0.4841	0.3413	0.3833	0.8676	0.3855	0.47	0.34	0.44	0.85	0.4594	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.429253	NA	NA	0.475061	0.824179	NA	0.551	NA	5.2481056
1127	12	52913517	52913517	G	A	intronic	KRT5	NA	NA	NA	intronic	ENSG00000186081	NA	NA	NA	NA	NA	12q13.13	NA	Name=Pol2	NA	NA	rs638907	0.13	0.13	0.115	0.101837	0.2773	0.0079	0.1254	0.0182	0.1145	0.28	0.01	0.15	0.02	0.1974	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.750614	NA	NA	0.277209	0.05379	NA	0.203	CLINSIG=untested;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000056621.1;CLNDSDB=.;CLNDSDBID=.	5.248091
1127	13	19999913	19999913	G	A	intronic	TPTE2	NA	NA	NA	exonic	ENSG00000132958	NA	stopgain	ENSG00000132958:ENST00000462409:exon14:c.C970T:p.R324X	NA	NA	13q12.11	NA	NA	NA	NA	rs2497213	0.28	0.28	0.198	NA	NA	NA	NA	NA	NA	0.19	0.22	0.34	0.44	0.252	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.786425	NA	NA	NA	NA	NA	NA	NA	5.248
1127	21	10862874	10862874	A	G	intergenic	TEKT4P2,TPTE	dist=894281;dist=43869	NA	NA	exonic	ENSG00000169861	NA	nonsynonymous SNV	ENSG00000169861:ENST00000302092:exon2:c.A170G:p.H57R,ENSG00000169861:ENST00000559480:exon2:c.A170G:p.H57R	Score=476;Name=lod=115	NA	21p11.2	NA	NA	NA	NA	rs1807747	NA	NA	0.553	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5855	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.287529	NA	1	NA	NA	NA	0.601	NA	5.2478334
1127	11	86209327	86209327	C	A	intronic	ME3	NA	NA	NA	ncRNA_intronic	ENSG00000254733	NA	NA	NA	NA	NA	11q14.2	Score=884;Name=V$E47_01	NA	NA	NA	rs79241234	0.04	0.04	0.036	0.0351438	0.0855	0.001	0.062	0.003	0.0429	0.09	0.0017	0.07	0.0041	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.244185	NA	NA	NA	NA	NA	0.014	NA	5.2478333
1127	17	15410363	15410363	T	C	intronic	TVP23C,TVP23C-CDRT4	NA	NA	NA	ncRNA_exonic	ENSG00000223878	NA	NA	NA	Score=638;Name=lod=521	NA	17p12	NA	NA	NA	NA	rs35469661	0.12	0.12	0.094	0.132188	0.0855	0.2044	0.1671	0.0333	0.2147	0.09	0.22	0.15	0.02	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.166894	NA	NA	NA	NA	NA	0.101	NA	5.2478333
1127	22	35802844	35802844	G	A	intronic	MCM5	NA	NA	NA	ncRNA_intronic	ENSG00000240293	NA	NA	NA	NA	NA	22q12.3	NA	Name=Pol2	NA	NA	rs4645760	0.04	0.04	0.043	0.0415335	0.0855	0.006	0.0288	0.0234	0.0665	0.08	0.01	0.02	0.03	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.168913	NA	NA	NA	NA	NA	0.036	NA	5.2478333
1127	4	55133726	55133726	T	G	exonic	PDGFRA	NA	synonymous SNV	PDGFRA:NM_006206:exon7:c.T939G:p.G313G	exonic	ENSG00000134853	NA	synonymous SNV	ENSG00000134853:ENST00000257290:exon7:c.T939G:p.G313G,ENSG00000134853:ENST00000509490:exon7:c.T939G:p.G313G	NA	NA	4q12	NA	NA	NA	NA	rs4358459	0.2	0.2	0.178	0.234225	0.1223	0.2034	0.3473	0.2723	0.2495	0.13	0.21	0.27	0.24	0.1775	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.204247	NA	NA	0.12	0.247617	ID=COSM1666925;OCCURENCE=1(central_nervous_system)	0.261	NA	5.2468666
1127	7	98597139	98597139	G	A	intronic	TRRAP	NA	NA	NA	ncRNA_exonic	ENSG00000238109	NA	NA	NA	Score=529;Name=lod=189	NA	7q22.1	NA	NA	NA	NA	rs2237600	0.15	0.15	0.151	0.13099	0.0865	0.2113	0.1614	0.1467	0.0511	0.09	0.24	0.17	0.14	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.557185	NA	NA	NA	NA	NA	0.109	NA	5.2468333
1127	12	31253995	31253995	C	T	exonic	DDX11	NA	synonymous SNV	DDX11:NM_001257144:exon20:c.C1983T:p.L661L,DDX11:NM_001257145:exon20:c.C1905T:p.L635L,DDX11:NM_004399:exon20:c.C1983T:p.L661L,DDX11:NM_030653:exon20:c.C1983T:p.L661L,DDX11:NM_152438:exon20:c.C1983T:p.L661L	exonic	ENSG00000013573	NA	synonymous SNV	ENSG00000013573:ENST00000228264:exon20:c.C1905T:p.L635L,ENSG00000013573:ENST00000350437:exon20:c.C1983T:p.L661L,ENSG00000013573:ENST00000407793:exon20:c.C1983T:p.L661L,ENSG00000013573:ENST00000542838:exon20:c.C1983T:p.L661L,ENSG00000013573:ENST00000545668:exon20:c.C1983T:p.L661L	Score=512;Name=lod=161	NA	12p11.21	NA	NA	NA	NA	rs1046456	0.57	0.57	0.577	0.628395	0.4394	0.8065	0.6124	0.6861	0.5726	0.38	0.77	0.57	0.62	0.5259	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.581983	NA	NA	0.455349	0.667726	NA	0.123	NA	5.2460176
1127	12	13529105	13529105	A	C	ncRNA_intronic	C12orf36	NA	NA	NA	UTR3	ENSG00000180861	ENST00000532841:c.*49T>G	NA	NA	NA	NA	12p13.1	NA	Name=ERalpha_a	NA	NA	rs12579519	0.09	0.09	0.082	0.0772764	0.1362	0.0744	0.0793	0.0076	0.1125	0.13	0.09	0.09	0.01	0.1178	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.325158	NA	NA	NA	NA	NA	0.145	NA	5.246
1127	1	247654993	247654993	T	C	exonic	OR2W5	NA	synonymous SNV	OR2W5:NM_001004698:exon1:c.T564C:p.S188S	ncRNA_exonic	ENSG00000203664	NA	NA	NA	Score=349;Name=lod=35	NA	1q44	NA	NA	NA	NA	rs10925061	0.33	0.33	0.352	0.323682	0.3231	0.2659	0.2536	0.4546	0.2566	0.33	0.29	0.26	0.45	0.2944	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.304846	NA	NA	0.303256	0.437812	NA	0.333	NA	5.2459106
1127	4	57377377	57377377	G	A	UTR5	ARL9	NM_206919:c.-121G>A	NA	NA	UTR5	ENSG00000196503	ENST00000360096:c.-121G>A	NA	NA	Score=557;Name=lod=245	NA	4q12	NA	NA	NA	NA	rs61732641	0.07	0.07	0.069	0.0646965	0.0169	0.1835	0.0202	0.028	0.0726	0.02	0.21	0.04	0.03	0.0707	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.047778	NA	NA	NA	NA	NA	0.051	NA	5.2457334
1127	22	24038847	24038847	T	C	exonic	RGL4	NA	nonsynonymous SNV	RGL4:NM_153615:exon7:c.T1133C:p.V378A	exonic	ENSG00000159496	NA	nonsynonymous SNV	ENSG00000159496:ENST00000290691:exon7:c.T1133C:p.V378A,ENSG00000159496:ENST00000423392:exon7:c.T1133C:p.V378A,ENSG00000159496:ENST00000401461:exon8:c.T725C:p.V242A,ENSG00000159496:ENST00000441897:exon10:c.T1300C:p.S434P	NA	NA	22q11.23	NA	NA	NA	NA	rs1007298	0.75	0.75	0.772	0.76857	0.6799	0.6964	0.7594	0.9228	0.7321	0.7	0.69	0.72	0.94	0.7166	0.94	1	T	0.0	B	0.0	B	0.610	N	1.000	P	-2.08	N	1.59	T	-0.997	T	0.000	T	0.104	-0.814	0.638	-0.409	-0.372	0.711	3.170	-0.814429	NA	0.05	0.691324	0.890831	ID=COSM1599892;OCCURENCE=1(central_nervous_system)	0.812	NA	5.2455094
1127	2	12164827	12164827	T	C	intergenic	MIR4262,TRIB2	dist=187715;dist=692171	NA	NA	ncRNA_intronic	ENSG00000224184	NA	NA	NA	Score=652;Name=lod=596	NA	2p25.1	NA	Name=CEBPB	NA	NA	rs12471113	0.6	0.6	0.569	0.579273	0.7545	0.619	0.6916	0.2186	0.7658	0.77	0.6	0.69	0.26	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.825907	1.825907	NA	NA	NA	NA	0.609	NA	5.2455
1127	11	30390132	30390132	A	G	intergenic	ARL14EP,MPPED2	dist=30967;dist=15908	NA	NA	ncRNA_exonic	ENSG00000242353	NA	NA	NA	Score=730;Name=lod=1234	NA	11p14.1	NA	Name=JunD	NA	NA	rs594937	0.82	0.82	0.809	0.848043	0.7545	0.7619	0.8746	0.9478	0.8793	0.77	0.77	0.86	0.94	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.449453	NA	NA	NA	NA	NA	0.848	NA	5.2455
1127	14	106877796	106877796	G	C	intergenic	LINC00226,LINC00221	dist=132830;dist=60659	NA	NA	exonic	ENSG00000211959	NA	synonymous SNV	ENSG00000211959:ENST00000390619:exon2:c.C198G:p.R66R	Score=366;Name=lod=41	NA	14q32.33	NA	NA	NA	NA	rs34195693	0.27	0.27	0.153	NA	NA	NA	NA	NA	NA	0.27	0.16	0.24	0.42	0.2545	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.401303	NA	NA	NA	NA	NA	0.109	NA	5.2455
1127	4	189018486	189018486	A	G	exonic	TRIML2	NA	synonymous SNV	TRIML2:NM_173553:exon5:c.T486C:p.S162S	exonic	ENSG00000179046	NA	synonymous SNV	ENSG00000179046:ENST00000512729:exon5:c.T486C:p.S162S,ENSG00000179046:ENST00000326754:exon6:c.T561C:p.S187S	NA	NA	4q35.2	NA	NA	NA	NA	rs17883789	0.16	0.16	0.129	0.141573	0.1392	0.1935	0.2176	0.093	0.1022	0.13	0.23	0.2	0.1	0.1478	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.328585	NA	NA	0.134186	0.120291	NA	0.116	NA	5.2454806
1127	11	117800083	117800083	T	C	UTR5	TMPRSS13	NM_001206789:c.-61A>G,NM_001077263:c.-61A>G,NM_001244995:c.-61A>G,NM_001206790:c.-61A>G	NA	NA	UTR5	ENSG00000137747	ENST00000528626:c.-61A>G,ENST00000430170:c.-61A>G,ENST00000445164:c.-61A>G,ENST00000526090:c.-61A>G,ENST00000528135:c.-61A>G	NA	NA	NA	NA	11q23.3	NA	Name=c-Myc,ERalpha_a,p300	Name=18	NA	rs10892196	0.6	0.6	0.575	0.621605	0.5398	0.6716	0.611	0.6694	0.5971	0.54	0.66	0.59	0.61	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.728512	1.728512	NA	0.548083	0.684249	NA	0.645	NA	5.2454504
1127	8	71593425	71593425	G	A	exonic	XKR9	NA	synonymous SNV	XKR9:NM_001011720:exon3:c.G132A:p.A44A	exonic	ENSG00000221947	NA	synonymous SNV	ENSG00000221947:ENST00000408926:exon3:c.G132A:p.A44A,ENSG00000221947:ENST00000519350:exon3:c.G132A:p.A44A,ENSG00000221947:ENST00000520092:exon3:c.G132A:p.A44A,ENSG00000221947:ENST00000520030:exon4:c.G132A:p.A44A	Score=393;Name=lod=53	NA	8q13.3	NA	NA	NA	NA	rs6991329	0.3	0.3	0.316	0.252196	0.5159	0.0734	0.2939	0.2269	0.1697	0.51	0.08	0.31	0.23	0.3923	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.281083	NA	NA	0.513023	0.262369	NA	0.42	NA	5.2454436
1127	6	150202644	150202644	T	C	ncRNA_intronic	LOC100652739	NA	NA	NA	ncRNA_exonic	ENSG00000217733	NA	NA	NA	Score=749;Name=lod=1481	NA	6q25.1	NA	NA	NA	NA	rs4870080	0.55	0.55	0.375	0.532149	0.4215	0.8919	0.5173	0.3949	0.4714	0.41	0.88	0.52	0.4	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.683322	NA	NA	NA	NA	NA	0.326	NA	5.2451666
1127	20	13747441	13747441	A	G	exonic	ESF1	NA	nonsynonymous SNV	ESF1:NM_001276380:exon8:c.T1649C:p.I550T,ESF1:NM_016649:exon8:c.T1649C:p.I550T	exonic	ENSG00000089048	NA	nonsynonymous SNV	ENSG00000089048:ENST00000202816:exon8:c.T1649C:p.I550T	NA	NA	20p12.1	NA	NA	NA	NA	rs3180370	0.78	0.78	0.793	0.805511	0.6879	0.9008	0.8069	0.8132	0.817	0.68	0.9	0.76	0.82	0.7311	0.9	0.51	T	0.094	B	0.026	B	0.500	N	1.000	P	0	N	0.71	T	-1.007	T	0.000	T	0.032	-1.545	0.015	0.445	-0.090	0.021	4.754	-1.544738	NA	0.58	0.669186	0.798684	NA	0.739	NA	5.2451474
1128	12	64265724	64265724	C	T	intronic	SRGAP1	NA	NA	NA	ncRNA_exonic	ENSG00000242087	NA	NA	NA	Score=577;Name=lod=294	NA	12q14.2	NA	NA	NA	NA	rs11175195	0.24	0.24	0.246	0.253794	0.0885	0.3929	0.1254	0.3517	0.2393	0.09	0.39	0.12	0.37	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.01631	NA	NA	NA	NA	NA	0.275	NA	5.2448333
1128	19	47883086	47883086	T	G	exonic	DHX34	NA	synonymous SNV	DHX34:NM_014681:exon14:c.T2826G:p.A942A	exonic	ENSG00000134815	NA	synonymous SNV	ENSG00000134815:ENST00000328771:exon14:c.T2826G:p.A942A	NA	NA	19q13.32	NA	NA	NA	NA	rs28522883	0.09	0.09	0.109	0.0874601	0.1441	0.0069	0.1009	0.0734	0.1217	0.14	0.01	0.12	0.09	0.1242	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.502124	NA	NA	0.153837	0.086246	NA	0.065	NA	5.2445296
1128	7	7949059	7949059	A	G	intergenic	LOC729852,GLCCI1	dist=30208;dist=59315	NA	NA	ncRNA_exonic	ENSG00000214998	NA	NA	NA	Score=265;Name=lod=16	NA	7p21.3	NA	NA	Name=32	NA	rs3919526	0.78	0.78	0.805	0.819089	0.7555	0.7173	0.7507	0.9675	0.8374	0.76	0.68	0.74	0.96	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.331664	NA	NA	NA	NA	NA	0.783	NA	5.2445
1128	2	61415492	61415492	A	G	exonic	USP34	NA	synonymous SNV	USP34:NM_014709:exon80:c.T10386C:p.A3462A	exonic	ENSG00000115464	NA	synonymous SNV	ENSG00000115464:ENST00000436269:exon7:c.T1020C:p.A340A,ENSG00000115464:ENST00000398571:exon80:c.T10386C:p.A3462A	NA	NA	2p15	NA	NA	NA	NA	rs14170	0.46	0.46	0.444	0.411741	0.4901	0.3929	0.4164	0.4781	0.2577	0.5	0.38	0.46	0.49	0.4441	0.5	.	.	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	0.046	4.254	-0.572	0.049	-0.555	3.133	0.046111	NA	NA	0.488242	0.478701	NA	0.471	NA	5.2442246
1128	6	150201179	150201179	A	G	ncRNA_intronic	LOC100652739	NA	NA	NA	ncRNA_exonic	ENSG00000217733	NA	NA	NA	Score=821;Name=lod=2880	NA	6q25.1	NA	NA	NA	NA	rs1334510	0.56	0.56	0.532	0.554513	0.4225	0.8919	0.5274	0.4735	0.4714	0.41	0.88	0.53	0.45	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.597304	NA	NA	NA	NA	NA	0.616	NA	5.2441666
1128	9	68427956	68427956	T	C	ncRNA_intronic	LOC642236	NA	NA	NA	ncRNA_intronic	ENSG00000215548	NA	NA	NA	NA	NA	9q13	NA	NA	Name=20	NA	rs4316243	NA	NA	0.409	0.421925	0.4225	0.4474	0.415	0.3986	0.4315	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.305717	NA	NA	NA	NA	NA	NA	NA	5.2441666
1128	7	143042837	143042837	C	T	exonic	CLCN1	NA	synonymous SNV	CLCN1:NM_000083:exon17:c.C2154T:p.D718D	exonic	ENSG00000188037	NA	synonymous SNV	ENSG00000188037:ENST00000343257:exon17:c.C2154T:p.D718D	NA	NA	7q34	NA	Name=GABP,HMGN3,CTCF,HA-E2F1,CCNT2	NA	NA	rs2272251	0.48	0.48	0.457	0.478235	0.4592	0.6141	0.585	0.3593	0.4427	0.46	0.63	0.54	0.29	0.5397	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.147259	NA	NA	0.423623	0.350327	ID=COSM452527;OCCURENCE=1(breast)	0.464	NA	5.2441436
1128	10	30317826	30317826	A	G	exonic	KIAA1462	NA	synonymous SNV	KIAA1462:NM_020848:exon3:c.T1251C:p.Y417Y	exonic	ENSG00000165757	NA	synonymous SNV	ENSG00000165757:ENST00000375377:exon3:c.T1251C:p.Y417Y	NA	NA	10p11.23	NA	NA	Name=12	NA	rs7920682	0.53	0.53	0.559	0.533347	0.4841	0.3413	0.3847	0.9138	0.3732	0.47	0.34	0.44	0.88	0.4621	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.234961	NA	NA	0.476449	0.844872	NA	0.558	NA	5.2440176
1128	2	24557641	24557641	T	C	intronic	ITSN2	NA	NA	NA	ncRNA_intronic	ENSG00000233747	NA	NA	NA	Score=678;Name=lod=761	NA	2p23.3	NA	NA	NA	NA	rs76453654	0.07	0.07	0.062	0.0634984	0.0895	0.0685	0.0562	0.0401	0.0685	0.09	0.07	0.06	0.06	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.121477	NA	NA	NA	NA	NA	0.043	NA	5.2438333
1128	7	116612727	116612727	G	A	intronic	ST7	NA	NA	NA	ncRNA_exonic	ENSG00000213050	NA	NA	NA	Score=758;Name=lod=1603	NA	7q31.2	NA	NA	NA	NA	rs74217565	0.1	0.1	0.077	0.0896565	0.0895	0.1438	0.0634	0.0885	0.0542	0.09	0.14	0.08	0.08	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.005846	NA	NA	NA	NA	NA	0.087	NA	5.2438333
1128	22	30412759	30412759	T	C	intronic	MTMR3	NA	NA	NA	ncRNA_intronic	ENSG00000227117	NA	NA	NA	NA	NA	22q12.2	NA	NA	Name=15	NA	rs17647135	0.09	0.09	0.086	0.0940495	0.0895	0.0794	0.1052	0.0802	0.1247	0.1	0.08	0.09	0.09	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.559111	1.559111	NA	NA	NA	NA	0.072	NA	5.2438333
1128	12	56335107	56335107	A	G	exonic	DGKA	NA	synonymous SNV	DGKA:NM_001345:exon14:c.A1173G:p.Q391Q,DGKA:NM_201444:exon14:c.A1173G:p.Q391Q,DGKA:NM_201554:exon14:c.A1173G:p.Q391Q,DGKA:NM_201445:exon15:c.A1173G:p.Q391Q	exonic	ENSG00000065357	NA	synonymous SNV	ENSG00000065357:ENST00000552903:exon2:c.A78G:p.Q26Q,ENSG00000065357:ENST00000555218:exon13:c.A930G:p.Q310Q,ENSG00000065357:ENST00000331886:exon14:c.A1173G:p.Q391Q,ENSG00000065357:ENST00000394147:exon14:c.A1173G:p.Q391Q,ENSG00000065357:ENST00000551156:exon14:c.A1173G:p.Q391Q	Score=512;Name=lod=161	NA	12q13.2	Score=900;Name=V$COUP_01	NA	NA	NA	rs1136082	0.84	0.84	0.871	0.847644	0.7952	0.7837	0.7968	0.9599	0.8517	0.81	0.8	0.76	0.97	0.8145	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.698505	2.698505	NA	0.813372	0.931457	NA	0.92	NA	5.2435946
1128	1	109734157	109734157	T	C	intronic	KIAA1324	NA	NA	NA	intronic	ENSG00000116299	NA	NA	NA	NA	NA	1p13.3	NA	Name=CTCF_(C-20),Rad21,ZBTB7A_(SC-34508),USF-1,CTCF,USF2,CTCFL_(SC-98982),E2F6_(H-50),YY1,ATF3,CTCF_(SC-5916)	Name=11	NA	rs606066	0.77	0.77	0.738	0.764377	0.7565	0.998	0.8156	0.4652	0.8998	0.78	1	0.81	0.44	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.042558	NA	NA	NA	NA	NA	0.79	NA	5.2435
1128	1	109734225	109734225	G	T	intronic	KIAA1324	NA	NA	NA	intronic	ENSG00000116299	NA	NA	NA	NA	NA	1p13.3	NA	Name=USF-1,CTCF,Rad21,ZBTB7A_(SC-34508),CTCF_(C-20),YY1,ATF3,E2F6_(H-50),USF2	Name=11	NA	rs643785	0.75	0.75	0.706	0.73123	0.7565	0.998	0.804	0.3548	0.8875	0.78	1	0.8	0.37	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.244333	NA	NA	NA	NA	NA	0.761	NA	5.2435
1128	1	247655275	247655275	T	C	exonic	OR2W5	NA	synonymous SNV	OR2W5:NM_001004698:exon1:c.T846C:p.H282H	ncRNA_exonic	ENSG00000203664	NA	NA	NA	Score=272;Name=lod=17	NA	1q44	NA	NA	NA	NA	rs12141850	0.33	0.33	0.345	0.323482	0.3241	0.2619	0.2406	0.4629	0.2566	0.33	0.29	0.25	0.43	0.2956	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.717758	NA	NA	0.303953	0.449841	NA	0.341	NA	5.2430136
1128	17	46052793	46052793	A	G	intronic	CDK5RAP3	NA	NA	NA	intronic	ENSG00000108465	NA	NA	NA	NA	NA	17q21.32	NA	Name=CTCF	Name=4	NA	rs2597172	0.72	0.72	0.715	0.689097	0.7575	0.7847	0.6614	0.5779	0.6902	0.77	0.78	0.72	0.58	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.220182	NA	NA	NA	NA	NA	0.696	NA	5.2425
1128	12	56031611	56031611	A	G	exonic	OR10P1	NA	synonymous SNV	OR10P1:NM_206899:exon1:c.A936G:p.S312S	exonic	ENSG00000175398	NA	synonymous SNV	ENSG00000175398:ENST00000309675:exon1:c.A936G:p.S312S	NA	NA	12q13.2	NA	NA	NA	NA	rs11171631	0.25	0.25	0.242	0.228435	0.1093	0.5367	0.1081	0.2156	0.136	0.12	0.55	0.12	0.19	0.1891	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.027562	NA	NA	0.125814	0.208352	NA	0.138	NA	5.2424526
1128	17	65574437	65574437	A	G	intronic	PITPNC1	NA	NA	NA	intronic	ENSG00000154217	NA	NA	NA	NA	NA	17q24.2	NA	Name=BATF,EBF1_(C-8),ELF1_(SC-631),IRF4_(M-17),Pol2,TBP,TCF12,NFKB,Pol2-4H8,EBF	Name=22	NA	rs8082003	0.52	0.52	0.522	0.555911	0.3847	0.7599	0.5591	0.4259	0.6953	0.39	0.77	0.49	0.47	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.449804	NA	NA	0.373426	0.453757	NA	0.601	NA	5.241874
1128	3	156870059	156870059	C	T	intronic	CCNL1	NA	NA	NA	intronic	ENSG00000163660	NA	NA	NA	Score=284;Name=lod=19	NA	3q25.31	NA	NA	Name=2	NA	rs73154633	0.27	0.27	0.218	0.241813	0.2584	0.3333	0.4784	0.0787	0.183	0.25	0.36	0.43	0.08	0.2565	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.130702	NA	NA	0.24407	0.116659	NA	0.174	NA	5.24103
1128	15	83713442	83713442	A	C	intronic	BTBD1	NA	NA	NA	ncRNA_exonic	ENSG00000259308	NA	NA	NA	Score=509;Name=lod=156	NA	15q25.2	NA	NA	NA	NA	rs4842993	0.19	0.19	0.184	0.169928	0.0924	0.379	0.2522	0.1104	0.0562	0.1	0.38	0.2	0.11	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.43652	NA	NA	NA	NA	NA	0.152	NA	5.2409333
1128	19	58929052	58929052	G	A	exonic	ZNF584	NA	synonymous SNV	ZNF584:NM_173548:exon4:c.G1167A:p.K389K	exonic	ENSG00000171574	NA	synonymous SNV	ENSG00000171574:ENST00000306910:exon4:c.G1167A:p.K389K,ENSG00000171574:ENST00000593920:exon4:c.G1032A:p.K344K	Score=361;Name=lod=39	NA	19q13.43	NA	NA	NA	NA	rs3764535	0.46	0.46	0.476	0.446885	0.496	0.3254	0.3573	0.5976	0.3814	0.49	0.32	0.4	0.61	0.4495	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.968313	NA	NA	0.480581	0.587381	NA	0.536	NA	5.2405856
1128	6	90368380	90368380	G	A	exonic	MDN1	NA	synonymous SNV	MDN1:NM_014611:exon89:c.C14970T:p.A4990A	exonic	ENSG00000112159	NA	synonymous SNV	ENSG00000112159:ENST00000369393:exon89:c.C14970T:p.A4990A,ENSG00000112159:ENST00000428876:exon89:c.C14970T:p.A4990A	NA	NA	6q15	NA	NA	NA	NA	rs34732313	0.09	0.09	0.085	0.104034	0.1581	0.0476	0.085	0.0605	0.1789	0.15	0.04	0.07	0.06	0.1241	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.042952	NA	NA	0.144186	0.063096	NA	0.138	NA	5.2402806
1128	1	100164000	100164000	A	G	ncRNA_intronic	MIR548AA1,MIR548D1	NA	NA	NA	ncRNA_exonic	ENSG00000223656	NA	NA	NA	Score=507;Name=lod=153	NA	1p21.2	NA	NA	NA	NA	rs10747504	0.48	0.48	0.475	0.457867	0.4264	0.3938	0.4885	0.618	0.318	0.42	0.42	0.49	0.62	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.60157	NA	NA	NA	NA	NA	0.391	NA	5.2402666
1128	10	105798872	105798872	T	C	exonic	COL17A1	NA	synonymous SNV	COL17A1:NM_000494:exon44:c.A2904G:p.P968P	exonic	ENSG00000065618	NA	synonymous SNV	ENSG00000065618:ENST00000369733:exon41:c.A2769G:p.P923P,ENSG00000065618:ENST00000353479:exon44:c.A2904G:p.P968P	Score=405;Name=lod=59	NA	10q24.33	Score=836;Name=V$GR_Q6	NA	NA	NA	rs2274100	0.72	0.72	0.673	0.68151	0.8171	0.7708	0.7695	0.4402	0.7137	0.81	0.8	0.78	0.42	0.7768	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.245268	NA	NA	0.832907	0.507036	NA	0.746	NA	5.2398596
1128	17	7682605	7682605	C	T	exonic	DNAH2	NA	synonymous SNV	DNAH2:NM_020877:exon35:c.C5586T:p.I1862I	exonic	ENSG00000183914	NA	synonymous SNV	ENSG00000183914:ENST00000389173:exon35:c.C5586T:p.I1862I,ENSG00000183914:ENST00000572933:exon36:c.C5586T:p.I1862I	NA	NA	17p13.1	NA	NA	NA	NA	rs17806045	0.07	0.07	0.072	0.0714856	0.169	0.001	0.1527	0.0038	0.0777	0.16	NA	0.11	0.01	0.1143	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.590216	NA	NA	0.14407	0.03064	NA	0.043	NA	5.2392966
1128	19	21688495	21688495	C	T	UTR5	ZNF429	NM_001001415:c.-79C>T	NA	NA	UTR5	ENSG00000197013	ENST00000358491:c.-79C>T,ENST00000597078:c.-79C>T	NA	NA	NA	NA	19p12	NA	Name=NF-YA,TAF1,Pol2,TAF7_(SQ-8),YY1_(C-20),ELF1_(SC-631),p300,CHD2_(N-1250),Pol2(b),YY1,Pol2-4H8,HEY1,NFKB,IRF1,TBP	Name=140	NA	rs73017722	0.56	0.56	0.534	0.555511	0.5388	0.6438	0.5288	0.4758	0.6084	0.54	0.67	0.55	0.48	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.051989	NA	NA	0.555311	0.478324	NA	0.471	NA	5.2392224
1128	5	75469889	75469889	A	G	intronic	SV2C	NA	NA	NA	ncRNA_exonic	ENSG00000254893	NA	NA	NA	Score=757;Name=lod=1585	NA	5q13.3	NA	NA	NA	NA	rs116002807	0.02	0.02	0.011	0.0139776	0.0388	NA	0.0173	0.0061	0.0112	0.04	NA	0.01	0.01	0.0236	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.57515	2.57515	NA	0.03186	0.009305	NA	0.007	NA	5.2390733
1128	10	27508758	27508758	T	C	exonic	ACBD5	NA	synonymous SNV	ACBD5:NM_001271512:exon5:c.A513G:p.P171P,ACBD5:NM_001042473:exon6:c.A414G:p.P138P,ACBD5:NM_145698:exon6:c.A519G:p.P173P	exonic	ENSG00000107897	NA	synonymous SNV	ENSG00000107897:ENST00000375897:exon4:c.A192G:p.P64P,ENSG00000107897:ENST00000375901:exon5:c.A192G:p.P64P,ENSG00000107897:ENST00000375888:exon6:c.A546G:p.P182P,ENSG00000107897:ENST00000375905:exon6:c.A414G:p.P138P,ENSG00000107897:ENST00000396271:exon6:c.A519G:p.P173P,ENSG00000107897:ENST00000412279:exon7:c.A447G:p.P149P,ENSG00000107897:ENST00000426079:exon7:c.A573G:p.P191P	Score=530;Name=lod=190	NA	10p12.1	NA	NA	NA	NA	rs10764690	0.35	0.35	0.325	0.317891	0.4652	0.4147	0.3905	0.0696	0.3507	0.47	0.36	0.41	0.09	0.4499	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.111617	NA	NA	0.512558	0.162052	ID=COSM1178411,COSM1178410;OCCURENCE=1(prostate)	0.246	NA	5.2390086
1128	19	6073506	6073506	C	T	intronic	RFX2	NA	NA	NA	ncRNA_exonic	ENSG00000267589	NA	NA	NA	Score=675;Name=lod=736	NA	19p13.3	NA	NA	NA	NA	rs687789	0.2	0.2	0.186	0.216454	0.0944	0.0804	0.0865	0.5749	0.09	0.09	0.08	0.09	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.39205	NA	NA	NA	NA	NA	NA	NA	5.2389333
1128	19	6073507	6073507	C	T	intronic	RFX2	NA	NA	NA	ncRNA_exonic	ENSG00000267589	NA	NA	NA	Score=675;Name=lod=736	NA	19p13.3	NA	NA	NA	NA	rs687791	0.2	0.2	0.18	0.216454	0.0944	0.0804	0.0865	0.5749	0.09	0.09	0.08	0.09	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.335157	NA	NA	NA	NA	NA	NA	NA	5.2389333
1128	1	111436857	111436857	T	G	intronic	CD53	NA	NA	NA	intronic	ENSG00000143119	NA	NA	NA	NA	NA	1p13.3	NA	Name=CTCF	Name=7	NA	rs1578956	0.5	0.5	0.203	0.559704	0.7614	0.501	0.7248	0.3336	0.6012	0.63	0.45	0.6	0.27	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.356473	NA	NA	NA	NA	NA	NA	NA	5.2386
1128	1	111436858	111436858	C	T	intronic	CD53	NA	NA	NA	intronic	ENSG00000143119	NA	NA	NA	NA	NA	1p13.3	NA	Name=CTCF	Name=7	NA	rs1936943	0.5	0.5	0.103	0.559704	0.7614	0.501	0.7248	0.3336	0.6012	0.63	0.45	0.6	0.27	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.233452	NA	NA	NA	NA	NA	NA	NA	5.2386
1128	18	48331524	48331524	G	A	exonic	MRO	NA	synonymous SNV	MRO:NM_001127174:exon4:c.C429T:p.D143D,MRO:NM_001127175:exon4:c.C471T:p.D157D,MRO:NM_001127176:exon4:c.C471T:p.D157D,MRO:NM_031939:exon5:c.C429T:p.D143D	exonic	ENSG00000134042	NA	synonymous SNV	ENSG00000134042:ENST00000431965:exon4:c.C471T:p.D157D,ENSG00000134042:ENST00000436348:exon4:c.C471T:p.D157D,ENSG00000134042:ENST00000588444:exon4:c.C429T:p.D143D,ENSG00000134042:ENST00000592966:exon4:c.C429T:p.D143D,ENSG00000134042:ENST00000256425:exon5:c.C429T:p.D143D,ENSG00000134042:ENST00000398439:exon5:c.C429T:p.D143D,ENSG00000134042:ENST00000428869:exon6:c.C429T:p.D143D	Score=352;Name=lod=36	NA	18q21.2	NA	NA	NA	NA	rs2586776	0.45	0.45	0.47	0.452875	0.4801	0.3363	0.4193	0.4448	0.5798	0.5	0.35	0.46	0.49	0.4736	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.198529	NA	NA	0.474535	0.456196	ID=COSM1389008,COSM1389007;OCCURENCE=1(large_intestine)	0.507	NA	5.2384316
1128	2	89185654	89185654	A	G	intergenic	MIR4436A,NONE	dist=73686;dist=NONE	NA	NA	exonic	ENSG00000211598	NA	synonymous SNV	ENSG00000211598:ENST00000390243:exon2:c.A348G:p.Q116Q	NA	NA	2p11.2	NA	Name=Pol2	NA	NA	rs111711225	0.07	0.07	0.069	0.0894569	0.0915	0.0129	0.0634	0.1014	0.1687	0.09	0.01	0.04	0.11	0.0873	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.516864	NA	NA	0.083233	0.129658	NA	0.058	NA	5.237967
1128	15	64821498	64821498	A	G	intronic	ZNF609	NA	NA	NA	ncRNA_exonic	ENSG00000248415	NA	NA	NA	Score=799;Name=lod=2348	NA	15q22.31	NA	NA	NA	NA	rs7165034	0.17	0.17	0.176	0.186901	0.0954	0.0466	0.0937	0.4501	0.136	0.09	0.04	0.11	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.616771	NA	NA	NA	NA	NA	0.21	NA	5.2379333
1128	15	84408896	84408896	C	G	intronic	ADAMTSL3	NA	NA	NA	ncRNA_exonic	ENSG00000261665	NA	NA	NA	Score=615;Name=lod=420	NA	15q25.2	NA	NA	NA	NA	rs59283606	0.1	0.1	0.093	0.145966	0.0954	0.2341	0.0591	0.056	0.2904	0.09	0.2	0.05	0.04	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.645124	NA	NA	NA	NA	NA	0.058	NA	5.2379333
1128	22	22721652	22721652	G	A	intergenic	LOC96610,ZNF280B	dist=44328;dist=117120	NA	NA	ncRNA_exonic	ENSG00000237428	NA	NA	NA	Score=770;Name=lod=1791	NA	22q11.22	NA	Name=BRF2	NA	NA	rs762466	0.75	0.75	0.703	0.726637	0.7624	0.8988	0.8098	0.4781	0.7894	0.76	0.91	0.8	0.49	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.584973	NA	NA	NA	NA	NA	0.601	NA	5.2376
1128	11	1264890	1264890	A	G	exonic	MUC5B	NA	synonymous SNV	MUC5B:NM_002458:exon31:c.A6780G:p.R2260R	exonic	ENSG00000117983	NA	synonymous SNV	ENSG00000117983:ENST00000447027:exon31:c.A6789G:p.R2263R,ENSG00000117983:ENST00000529681:exon31:c.A6780G:p.R2260R	NA	NA	11p15.5	NA	NA	NA	NA	rs12286473	0.07	0.07	0.027	0.0976438	0.1779	0.0208	0.0922	0.0446	0.1697	0.12	0.02	0.09	0.04	0.1392	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.285016	NA	NA	0.112406	0.026037	NA	NA	NA	5.2371606
1128	11	77524722	77524722	T	G	intronic	RSF1	NA	NA	NA	ncRNA_exonic	ENSG00000219529	NA	NA	NA	Score=497;Name=lod=140	NA	11q14.1	NA	NA	NA	NA	rs58914857	0.15	0.15	0.133	0.142173	0.0964	0.1766	0.1902	0.1362	0.1278	0.1	0.19	0.16	0.16	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.579495	NA	NA	NA	NA	NA	0.152	NA	5.2369333
1128	14	106881230	106881230	C	T	intergenic	LINC00226,LINC00221	dist=136264;dist=57225	NA	NA	downstream	ENSG00000253467	NA	NA	NA	NA	NA	14q32.33	NA	Name=EBF,EBF1_(C-8)	Name=2	NA	rs77658043	0.27	0.27	0.247	0.29972	0.2634	0.1607	0.2248	0.4357	0.3497	0.27	0.17	0.22	0.42	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.104073	NA	NA	NA	NA	NA	0.203	NA	5.2366
1128	20	10366898	10366898	T	C	intergenic	SNAP25,MKKS	dist=78832;dist=18530	NA	NA	ncRNA_exonic	ENSG00000230750	NA	NA	NA	Score=678;Name=lod=758	NA	20p12.2	NA	NA	Name=30	NA	rs2223654	0.72	0.72	0.704	0.739217	0.7634	0.5288	0.8501	0.8684	0.6779	0.75	0.53	0.82	0.85	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.563095	NA	NA	NA	NA	NA	0.739	NA	5.2366
1128	7	1097895	1097895	A	G	exonic	GPR146	NA	synonymous SNV	GPR146:NM_138445:exon1:c.A744G:p.P248P	exonic	ENSG00000164849	NA	synonymous SNV	ENSG00000164849:ENST00000297468:exon1:c.A744G:p.P248P,ENSG00000164849:ENST00000397095:exon2:c.A744G:p.P248P,ENSG00000164849:ENST00000444847:exon2:c.A744G:p.P248P	NA	NA	7p22.3	NA	NA	NA	NA	rs61910751	0.07	0.07	0.067	0.0688898	0.1262	NA	0.0821	0.0204	0.137	0.13	NA	0.09	0.02	0.1465	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.11843	NA	NA	0.157478	0.046776	NA	0.08	NA	5.2364886
1128	15	20874799	20874799	A	C	ncRNA_exonic	NBEAP1	NA	NA	NA	ncRNA_exonic	ENSG00000258590	NA	NA	NA	Score=659;Name=lod=635	NA	15q11.2	NA	NA	NA	NA	rs11633771	NA	NA	0.337	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4303	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.109973	NA	NA	NA	NA	NA	0.268	NA	5.2363666
1128	2	105979730	105979730	C	A	intronic	FHL2	NA	NA	NA	ncRNA_intronic	ENSG00000238273	NA	NA	NA	NA	NA	2q12.1	NA	NA	Name=14	NA	rs2278502	0.29	0.29	0.292	0.277356	0.3867	0.2173	0.3285	0.1415	0.3742	0.39	0.22	0.31	0.19	0.334	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.44495	NA	NA	0.376628	0.184975	NA	0.29	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000041648.1;CLNDSDB=.;CLNDSDBID=.	5.2360053
1128	19	960266	960266	C	T	intronic	ARID3A	NA	NA	NA	intronic	ENSG00000116017	NA	NA	NA	NA	NA	19p13.3	NA	Name=CTCF	Name=11	NA	rs1683584	0.6	0.6	0.575	0.562101	0.7644	0.4831	0.536	0.5083	0.5266	0.75	0.48	0.61	0.5	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.026584	NA	NA	NA	NA	NA	0.674	NA	5.2356
1128	20	48522585	48522585	G	A	exonic	SPATA2	NA	synonymous SNV	SPATA2:NM_001135773:exon3:c.C1134T:p.S378S,SPATA2:NM_006038:exon3:c.C1134T:p.S378S	exonic	ENSG00000158480	NA	synonymous SNV	ENSG00000158480:ENST00000543716:exon2:c.C723T:p.S241S,ENSG00000158480:ENST00000289431:exon3:c.C1134T:p.S378S,ENSG00000158480:ENST00000422556:exon3:c.C1134T:p.S378S	NA	NA	20q13.13	NA	NA	Name=8	NA	rs492702	0.48	0.48	0.445	0.488618	0.4503	0.7728	0.585	0.1225	0.6616	0.45	0.79	0.53	0.14	0.5175	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.06171	NA	NA	0.463721	0.181571	NA	0.355	NA	5.2351456
1129	11	77446051	77446051	T	C	intronic	RSF1	NA	NA	NA	ncRNA_exonic	ENSG00000227376	NA	NA	NA	Score=755;Name=lod=1565	NA	11q14.1	NA	NA	NA	NA	rs73491984	0.19	0.19	0.158	0.19389	0.0984	0.1746	0.2161	0.3177	0.1288	0.1	0.19	0.19	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.114233	NA	NA	NA	NA	NA	0.203	NA	5.2349333
1129	14	94772429	94772429	G	A	exonic	SERPINA6	NA	synonymous SNV	SERPINA6:NM_001756:exon4:c.C1011T:p.D337D	exonic	ENSG00000170099	NA	synonymous SNV	ENSG00000170099:ENST00000341584:exon4:c.C1011T:p.D337D	NA	NA	14q32.13	NA	NA	NA	NA	rs2228543	0.15	0.15	0.141	0.153754	0.1531	0.0069	0.0965	0.3343	0.1022	0.16	0.01	0.1	0.34	0.1361	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.362845	NA	NA	0.142558	0.330685	NA	0.188	NA	5.2349086
1129	12	121017171	121017171	A	G	exonic	POP5	NA	synonymous SNV	POP5:NM_198202:exon4:c.T292C:p.L98L,POP5:NM_015918:exon5:c.T442C:p.L148L	exonic	ENSG00000167272	NA	synonymous SNV	ENSG00000167272:ENST00000341039:exon4:c.T292C:p.L98L,ENSG00000167272:ENST00000357500:exon5:c.T442C:p.L148L	NA	NA	12q24.31	NA	Name=Pol2-4H8,TAL1_(SC-12984)	Name=16	NA	rs7174	0.8	0.8	0.798	0.786542	0.7962	0.8413	0.8271	0.708	0.7975	0.8	0.84	0.82	0.75	0.8147	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.063841	NA	NA	0.821047	0.709941	NA	0.775	NA	5.2347196
1129	2	216299629	216299629	C	G	intronic	FN1	NA	NA	NA	intronic	ENSG00000115414	NA	NA	NA	NA	NA	2q35	NA	Name=JunD,c-Jun	Name=44	NA	rs1250247	0.86	0.86	0.859	0.792532	0.7654	0.9256	0.7925	0.8979	0.5409	0.78	0.95	0.81	0.89	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.387789	NA	NA	NA	NA	NA	0.812	NA	5.2346
1129	12	31242399	31242399	T	C	exonic	DDX11	NA	synonymous SNV	DDX11:NM_001257144:exon8:c.T855C:p.C285C,DDX11:NM_001257145:exon8:c.T777C:p.C259C,DDX11:NM_004399:exon8:c.T855C:p.C285C,DDX11:NM_030653:exon8:c.T855C:p.C285C,DDX11:NM_152438:exon8:c.T855C:p.C285C	exonic	ENSG00000013573	NA	synonymous SNV	ENSG00000013573:ENST00000438391:exon7:c.T768C:p.C256C,ENSG00000013573:ENST00000228264:exon8:c.T777C:p.C259C,ENSG00000013573:ENST00000350437:exon8:c.T855C:p.C285C,ENSG00000013573:ENST00000407793:exon8:c.T855C:p.C285C,ENSG00000013573:ENST00000539049:exon8:c.T855C:p.C285C,ENSG00000013573:ENST00000540935:exon8:c.T777C:p.C259C,ENSG00000013573:ENST00000542838:exon8:c.T855C:p.C285C,ENSG00000013573:ENST00000545668:exon8:c.T855C:p.C285C	NA	NA	12p11.21	Score=905;Name=V$CEBP_01	NA	NA	NA	rs3881298	0.52	0.52	0.547	0.645567	0.4682	0.7748	0.6311	0.7179	0.6074	0.34	0.69	0.53	0.58	0.5214	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.244441	NA	NA	0.442791	0.669315	NA	0.181	NA	5.2342756
1129	19	2078221	2078221	G	C	exonic	MOB3A	NA	synonymous SNV	MOB3A:NM_130807:exon3:c.C339G:p.L113L	exonic	ENSG00000172081	NA	synonymous SNV	ENSG00000172081:ENST00000592280:exon1:c.C339G:p.L113L,ENSG00000172081:ENST00000357066:exon3:c.C339G:p.L113L	NA	NA	19p13.3	NA	NA	NA	NA	rs11541046	0.13	0.13	0.136	0.152756	0.1352	0.0804	0.1081	0.1906	0.226	0.12	0.08	0.11	0.21	0.148	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.249497	NA	NA	0.149884	0.19133	NA	0.08	NA	5.2335826
1129	12	6457062	6457062	T	C	exonic	SCNN1A	NA	nonsynonymous SNV	SCNN1A:NM_001159576:exon12:c.A2164G:p.T722A,SCNN1A:NM_001038:exon13:c.A1987G:p.T663A,SCNN1A:NM_001159575:exon13:c.A2056G:p.T686A	exonic	ENSG00000111319	NA	nonsynonymous SNV	ENSG00000111319:ENST00000540037:exon11:c.A1087G:p.T363A,ENSG00000111319:ENST00000360168:exon12:c.A2164G:p.T722A,ENSG00000111319:ENST00000228916:exon13:c.A1987G:p.T663A,ENSG00000111319:ENST00000358945:exon13:c.A2053G:p.T685A,ENSG00000111319:ENST00000543768:exon13:c.A2056G:p.T686A	NA	NA	12p13.31	NA	NA	NA	NA	rs2228576	0.72	0.72	0.746	0.740615	0.6938	0.496	0.7392	0.9486	0.7607	0.68	0.56	0.75	0.95	0.7133	0.95	1	T	0.0	B	0.0	B	0.520	N	1.000	P	-2.08	N	-0.08	T	-0.939	T	0.000	T	0.023	-1.24	0.055	1.89	0.425	-0.586	3.471	-1.240246	NA	1	0.692918	0.899952	NA	0.833	NA	5.2333154
1129	21	37505138	37505138	A	G	ncRNA_exonic	CBR3-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000214889,ENSG00000236830	NA	NA	NA	Score=749;Name=lod=1476	NA	21q22.12	NA	NA	NA	NA	rs13047406	0.36	0.36	0.328	0.314896	0.4334	0.4335	0.4553	0.0809	0.2873	0.44	0.43	0.43	0.1	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.149837	NA	NA	NA	NA	NA	0.384	NA	5.2332666
1129	11	117310022	117310022	A	G	exonic	DSCAML1	NA	synonymous SNV	DSCAML1:NM_020693:exon23:c.T4284C:p.T1428T	exonic	ENSG00000177103	NA	synonymous SNV	ENSG00000177103:ENST00000527706:exon21:c.T3474C:p.T1158T,ENSG00000177103:ENST00000321322:exon23:c.T4284C:p.T1428T	NA	NA	11q23.3	NA	NA	NA	NA	rs11216387	0.3	0.3	0.279	0.304113	0.1233	0.5605	0.3012	0.3116	0.2178	0.12	0.56	0.28	0.31	0.2038	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.403974	NA	NA	0.106611	0.282144	ID=COSM147329;OCCURENCE=1(stomach)	0.275	NA	5.2329556
1129	17	61573761	61573761	T	C	exonic	ACE	NA	synonymous SNV	ACE:NM_152830:exon12:c.T1665C:p.F555F,ACE:NM_000789:exon23:c.T3387C:p.F1129F	exonic	ENSG00000159640,ENSG00000264813	NA	synonymous SNV	ENSG00000159640:ENST00000290863:exon12:c.T1665C:p.F555F,ENSG00000159640:ENST00000490216:exon12:c.T1665C:p.F555F,ENSG00000264813:ENST00000577647:exon12:c.T1665C:p.F555F,ENSG00000159640:ENST00000290866:exon23:c.T3387C:p.F1129F,ENSG00000159640:ENST00000428043:exon23:c.T3387C:p.F1129F	Score=563;Name=lod=260	NA	17q23.3	NA	NA	NA	NA	rs4362	0.56	0.56	0.524	0.58746	0.4433	0.6081	0.5893	0.6225	0.6656	0.45	0.64	0.59	0.62	0.5233	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.442309	NA	NA	0.467442	0.57921	NA	0.594	NA	5.2326246
1129	17	56424710	56424710	T	C	ncRNA_intronic	BZRAP1-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000265148	NA	NA	NA	NA	NA	17q22	NA	NA	Name=2	NA	rs757485	0.46	0.46	0.451	0.478634	0.4344	0.5516	0.3718	0.4554	0.5562	0.45	0.55	0.34	0.44	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.280296	NA	NA	NA	NA	NA	0.406	NA	5.2322666
1129	19	43383801	43383801	G	A	UTR5	PSG1	NM_001184826:c.-68C>T,NM_001184825:c.-68C>T,NM_006905:c.-68C>T	NA	NA	UTR5	ENSG00000231924	ENST00000436291:c.-68C>T,ENST00000595124:c.-68C>T,ENST00000403380:c.-68C>T,ENST00000312439:c.-68C>T,ENST00000244296:c.-68C>T	NA	NA	NA	NA	19q13.2	NA	NA	Name=3	NA	rs12459171	0.2	0.2	0.174	0.251398	0.1014	0.4187	0.1787	0.1899	0.3681	0.1	0.41	0.12	0.17	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.053281	NA	NA	NA	NA	NA	0.174	NA	5.2319334
1129	9	108522175	108522175	C	T	intronic	TMEM38B	NA	NA	NA	ncRNA_exonic	ENSG00000232486	NA	NA	NA	Score=634;Name=lod=502	NA	9q31.2	NA	NA	NA	NA	rs10114077	0.31	0.31	0.308	0.322883	0.1014	0.4415	0.2507	0.559	0.1605	0.1	0.42	0.23	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.103268	NA	NA	NA	NA	NA	0.319	NA	5.2319333
1129	10	38407519	38407519	A	G	exonic	ZNF37A	NA	synonymous SNV	ZNF37A:NM_001178101:exon7:c.A1440G:p.S480S,ZNF37A:NM_003421:exon7:c.A1440G:p.S480S,ZNF37A:NM_001007094:exon8:c.A1440G:p.S480S	exonic	ENSG00000075407	NA	synonymous SNV	ENSG00000075407:ENST00000361085:exon7:c.A1440G:p.S480S,ENSG00000075407:ENST00000351773:exon8:c.A1440G:p.S480S	NA	NA	10p11.1	NA	Name=ZNF274,SETDB1,KAP1	NA	NA	rs176889	0.5	0.5	0.486	0.46905	0.4901	0.5595	0.513	0.4947	0.2883	0.5	0.53	0.5	0.47	0.456	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.615338	NA	NA	0.488837	0.50749	NA	0.507	NA	5.2317296
1129	9	134406131	134406131	G	T	intronic	UCK1	NA	NA	NA	intronic	ENSG00000130717	NA	NA	NA	NA	NA	9q34.13	NA	Name=CTCF,E2F6_(H-50),CTCFL_(SC-98982),ZBTB7A_(SC-34508)	Name=75	NA	rs3904960	0.75	0.75	0.731	0.761182	0.7684	0.9266	0.7277	0.5212	0.9315	0.77	0.92	0.75	0.52	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.124726	NA	NA	NA	NA	NA	0.739	NA	5.2316
1129	14	106881223	106881223	G	A	intergenic	LINC00226,LINC00221	dist=136257;dist=57232	NA	NA	downstream	ENSG00000253467	NA	NA	NA	NA	NA	14q32.33	NA	Name=EBF1_(C-8),EBF	Name=2	NA	rs111324784	NA	NA	0.23	0.298722	0.2684	0.1607	0.2248	0.4312	0.3456	NA	NA	NA	NA	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.014833	NA	NA	NA	NA	NA	0.21	NA	5.2316
1129	1	152185750	152185750	G	A	exonic	HRNR	NA	synonymous SNV	HRNR:NM_001009931:exon3:c.C8355T:p.Y2785Y	exonic	ENSG00000197915	NA	synonymous SNV	ENSG00000197915:ENST00000368801:exon3:c.C8355T:p.Y2785Y	NA	NA	1q21.3	NA	NA	NA	NA	rs12729662	0.32	0.32	0.345	0.342652	0.17	0.6181	0.415	0.1172	0.4898	0.18	0.63	0.35	0.14	0.2651	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.328928	NA	NA	NA	NA	ID=COSM1334092;OCCURENCE=1(large_intestine)	0.217	NA	5.2315666
1129	19	2433890	2433890	A	G	exonic	LMNB2	NA	synonymous SNV	LMNB2:NM_032737:exon8:c.T1416C:p.G472G	exonic	ENSG00000176619	NA	synonymous SNV	ENSG00000176619:ENST00000325327:exon8:c.T1416C:p.G472G,ENSG00000176619:ENST00000582871:exon8:c.T1356C:p.G452G	NA	NA	19p13.3	NA	NA	NA	NA	rs11084940	0.63	0.63	0.624	0.63758	0.4374	0.6349	0.6643	0.8502	0.5399	0.46	0.67	0.62	0.84	0.5461	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.492544	NA	NA	0.452093	0.803361	ID=COSM439143;OCCURENCE=1(breast)	0.232	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117495.2;CLNDSDB=.;CLNDSDBID=.	5.2310736
1129	22	18209718	18209718	C	T	exonic	BCL2L13	NA	synonymous SNV	BCL2L13:NM_001270733:exon2:c.C36T:p.N12N,BCL2L13:NM_001270727:exon5:c.C804T:p.N268N,BCL2L13:NM_001270730:exon5:c.C390T:p.N130N,BCL2L13:NM_001270726:exon6:c.C948T:p.N316N,BCL2L13:NM_001270729:exon6:c.C390T:p.N130N,BCL2L13:NM_001270731:exon6:c.C390T:p.N130N,BCL2L13:NM_015367:exon7:c.C876T:p.N292N	exonic	ENSG00000099968	NA	synonymous SNV	ENSG00000099968:ENST00000538149:exon4:c.C504T:p.N168N,ENSG00000099968:ENST00000337612:exon5:c.C390T:p.N130N,ENSG00000099968:ENST00000543133:exon6:c.C390T:p.N130N,ENSG00000099968:ENST00000317582:exon7:c.C876T:p.N292N	NA	NA	22q11.21	NA	NA	NA	NA	rs2535688	0.07	0.07	0.054	0.0533147	0.1421	0.002	0.0994	0.0061	0.046	0.15	NA	0.1	0.01	0.1241	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.788527	NA	NA	0.169651	0.034271	NA	0.101	NA	5.2308156
1129	14	91233244	91233244	T	C	intronic	TTC7B	NA	NA	NA	ncRNA_exonic	ENSG00000213315	NA	NA	NA	Score=717;Name=lod=1090	NA	14q32.11	NA	NA	NA	NA	rs61741695	0.19	0.19	0.178	0.200879	0.1044	0.1617	0.1138	0.3525	0.1973	0.11	0.17	0.13	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.035944	NA	NA	NA	NA	NA	0.21	NA	5.2289333
1129	11	7439264	7439264	C	T	exonic	SYT9	NA	synonymous SNV	SYT9:NM_175733:exon5:c.C1242T:p.T414T	exonic	ENSG00000170743	NA	synonymous SNV	ENSG00000170743:ENST00000318881:exon5:c.C1242T:p.T414T	NA	NA	11p15.4	NA	NA	NA	NA	rs34058874	0.17	0.17	0.159	0.171526	0.1491	0.2897	0.1254	0.1604	0.1207	0.14	0.28	0.12	0.14	0.1484	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.604724	NA	NA	0.14048	0.138801	ID=COSM147136;OCCURENCE=1(stomach)	0.116	NA	5.2286866
1129	13	45010867	45010867	C	T	UTR5	TSC22D1	NM_006022:c.-103G>A	NA	NA	UTR5	ENSG00000102804	ENST00000261489:c.-103G>A	NA	NA	NA	NA	13q14.11	NA	Name=Pol2(phosphoS2),Pol2,SP1,NRSF,GATA3_(SC-268),TAF1,p300,GTF2F1_(RAP-74),Rad21,RFX5_(N-494),Pol2-4H8,GATA-2,Sin3Ak-20,JunD,Pol2(b),HEY1	NA	NA	rs11552414	0.1	0.1	0.109	0.105032	0.1054	0.0139	0.0994	0.205	0.0675	0.11	0.0035	0.06	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.448794	NA	NA	NA	NA	NA	0.167	NA	5.2279334
1129	6	134618497	134618497	C	T	intronic	SGK1	NA	NA	NA	ncRNA_exonic	ENSG00000220378	NA	NA	NA	Score=653;Name=lod=600	NA	6q23.2	NA	NA	NA	NA	rs4895399	0.19	0.19	0.147	0.169529	0.1054	0.3185	0.2334	0.1195	0.1043	0.12	0.34	0.2	0.12	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.524222	NA	NA	NA	NA	NA	0.109	NA	5.2279333
1129	9	108286758	108286758	C	T	intronic	FSD1L	NA	NA	NA	ncRNA_exonic	ENSG00000229419	NA	NA	NA	Score=735;Name=lod=1300	NA	9q31.2	NA	NA	NA	NA	rs3750499	0.21	0.21	0.155	0.208666	0.1054	0.4474	0.2133	0.1203	0.1851	0.11	0.42	0.18	0.13	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.486377	NA	NA	NA	NA	NA	0.225	NA	5.2279333
1129	10	117228794	117228794	A	G	exonic	ATRNL1	NA	synonymous SNV	ATRNL1:NM_207303:exon24:c.A3609G:p.T1203T	exonic	ENSG00000107518	NA	synonymous SNV	ENSG00000107518:ENST00000423111:exon8:c.A762G:p.T254T,ENSG00000107518:ENST00000355044:exon24:c.A3609G:p.T1203T	Score=681;Name=lod=778	NA	10q25.3	NA	NA	NA	NA	rs10885721	0.36	0.36	0.332	0.344449	0.4911	0.1677	0.4654	0.2935	0.3589	0.46	0.17	0.49	0.3	0.4366	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.015132	NA	NA	0.51122	0.347064	NA	0.283	NA	5.2277466
1129	20	36231284	36231284	C	T	intergenic	BLCAP,LINC00489	dist=74951;dist=16416	NA	NA	ncRNA_exonic	ENSG00000228234	NA	NA	NA	NA	NA	20q11.23	NA	Name=MafK_(SC-477),MafF_(M8194),JunD,c-Jun,MafK_(ab50322)	Name=2	NA	rs4810922	0.68	0.68	0.669	0.617812	0.7724	0.7232	0.7752	0.4244	0.5	0.77	0.75	0.74	0.4	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.990008	NA	NA	NA	NA	NA	0.652	NA	5.2276
1129	1	12907885	12907885	T	C	exonic	HNRNPCL1,LOC649330	NA	synonymous SNV	LOC649330:NM_001146181:exon1:c.A258G:p.A86A,HNRNPCL1:NM_001013631:exon2:c.A258G:p.A86A	exonic	ENSG00000179172	NA	synonymous SNV	ENSG00000179172:ENST00000317869:exon2:c.A258G:p.A86A	Score=665;Name=lod=673	NA	1p36.21	NA	NA	NA	NA	rs848418	NA	NA	0.599	0.913938	0.9433	0.8125	0.9121	0.9614	0.9254	NA	NA	NA	NA	0.4959	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.294577	NA	NA	NA	NA	NA	0.13	NA	5.2274666
1129	14	23855569	23855569	A	G	exonic	MYH6	NA	synonymous SNV	MYH6:NM_002471:exon33:c.T4914C:p.A1638A	exonic	ENSG00000197616	NA	synonymous SNV	ENSG00000197616:ENST00000356287:exon32:c.T4914C:p.A1638A,ENSG00000197616:ENST00000405093:exon33:c.T4914C:p.A1638A	NA	NA	14q11.2	NA	NA	NA	NA	rs178640	0.42	0.42	0.407	0.492812	0.4891	0.2569	0.3718	0.7579	0.4673	0.44	0.25	0.39	0.63	0.4649	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.641838	NA	NA	0.485465	0.685429	NA	0.413	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000037521.1;CLNDSDB=.;CLNDSDBID=.	5.2272016
1129	6	117730819	117730819	G	A	intronic	ROS1	NA	NA	NA	intronic	ENSG00000047936	NA	NA	NA	NA	Name=QT interval (interaction)	6q22.1	NA	NA	Name=2	NA	rs2273601	0.3	0.3	0.301	0.360224	0.2565	0.2738	0.1888	0.5076	0.4785	0.25	0.28	0.19	0.46	0.2795	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.236306	NA	NA	0.23686	0.47231	NA	0.377	NA	5.22714
1129	17	39296254	39296254	C	T	exonic	KRTAP4-6	NA	synonymous SNV	KRTAP4-6:NM_030976:exon1:c.G486A:p.P162P	exonic	ENSG00000198090	NA	synonymous SNV	ENSG00000198090:ENST00000345847:exon1:c.G486A:p.P162P	NA	NA	17q21.2	NA	NA	NA	NA	rs72483263	NA	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4397	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.072282	NA	NA	NA	NA	NA	NA	NA	5.2269666
1129	4	17913879	17913879	A	G	intronic	LCORL	NA	NA	NA	ncRNA_exonic	ENSG00000235413	NA	NA	NA	Score=627;Name=lod=473	NA	4p15.31	NA	NA	NA	NA	rs35921582	0.11	0.11	0.096	0.152756	0.1064	0.1627	0.1311	0.093	0.2863	0.11	0.12	0.13	0.1	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.170846	NA	NA	NA	NA	NA	0.123	NA	5.2269333
1129	8	10469340	10469340	G	A	exonic	RP1L1	NA	synonymous SNV	RP1L1:NM_178857:exon4:c.C2268T:p.N756N	exonic	ENSG00000183638	NA	synonymous SNV	ENSG00000183638:ENST00000382483:exon4:c.C2268T:p.N756N	NA	NA	8p23.1	NA	NA	NA	NA	rs57819090	0.15	0.15	0.148	0.186701	0.1352	0.2133	0.1643	0.0756	0.3783	0.15	0.21	0.18	0.09	0.1703	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.060963	NA	NA	0.134504	0.081694	NA	0.174	NA	5.2266626
1129	1	146502615	146502615	T	G	ncRNA_intronic	LOC728989	NA	NA	NA	ncRNA_exonic	ENSG00000227242	NA	NA	NA	Score=470;Name=lod=108	NA	1q21.1	NA	NA	NA	NA	rs4950332	0.33	0.33	0.354	0.317692	0.4404	0.1667	0.2709	0.413	0.2515	0.45	0.15	0.32	0.39	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.624588	NA	NA	NA	NA	NA	0.457	NA	5.2262666
1129	19	58963047	58963047	G	T	UTR5	ZNF324B	NM_207395:c.-2022G>T	NA	NA	UTR5	ENSG00000249471	ENST00000336614:c.-2022G>T,ENST00000545523:c.-2022G>T,ENST00000599194:c.-2022G>T,ENST00000599193:c.-2022G>T,ENST00000598244:c.-2022G>T,ENST00000391696:c.-3295G>T,ENST00000594214:c.-2022G>T	NA	NA	NA	NA	19q13.43	NA	Name=Pol2-4H8,c-Fos,HA-E2F1,Sin3Ak-20,Pbx3,IRF1,TBP,HEY1,ZBTB7A_(SC-34508),CCNT2,c-Myc,E2F6,Pol2,SP1,GABP,POU2F2,TAF1,ETS1,CHD2_(N-1250),Oct-2,ELF1_(SC-631)	NA	NA	rs116959667	0.03	0.03	0.027	0.0205671	0.0586	0.001	0.0418	0.0023	0.0112	0.05	0.01	0.06	0.002	0.0486	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.400617	1.400617	NA	NA	NA	NA	NA	NA	5.2261334
1129	2	136268560	136268560	G	A	intronic	ZRANB3	NA	NA	NA	ncRNA_exonic	ENSG00000235651	NA	NA	NA	Score=412;Name=lod=63	NA	2q21.3	NA	NA	NA	NA	rs16831774	0.17	0.17	0.173	0.228634	0.1074	0.1687	0.232	0.2685	0.3589	0.11	0.14	0.2	0.26	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.464346	NA	NA	NA	NA	NA	0.188	NA	5.2259333
1129	7	96651406	96651406	A	G	intronic	DLX5	NA	NA	NA	UTR3	ENSG00000105880	ENST00000486603:c.*55T>C	NA	NA	NA	NA	7q21.3	NA	Name=SUZ12	Name=10	NA	rs1207733	0.97	0.97	0.972	0.977835	0.9414	0.9911	0.9798	0.9977	0.9734	0.94	0.99	0.98	1	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.955058	NA	NA	NA	NA	NA	1	NA	5.2252667
1129	22	51016098	51016098	A	G	ncRNA_intronic	CHKB-CPT1B	NA	NA	NA	intronic	ENSG00000205560,ENSG00000254413	NA	NA	NA	NA	NA	22q13.33	NA	NA	Name=5	NA	rs5770916	0.25	0.25	0.226	0.282947	0.1083	0.4613	0.2709	0.1974	0.4029	0.12	0.47	0.22	0.21	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.419619	NA	NA	NA	NA	NA	0.239	NA	5.2250333
1130	20	44417675	44417675	G	C	exonic	WFDC3	NA	nonsynonymous SNV	WFDC3:NM_080614:exon3:c.C106G:p.H36D	exonic	ENSG00000124116	NA	nonsynonymous SNV	ENSG00000124116:ENST00000372632:exon2:c.C106G:p.H36D,ENSG00000124116:ENST00000243938:exon3:c.C106G:p.H36D	NA	NA	20q13.12	NA	NA	NA	NA	rs6032538	0.68	0.68	0.673	0.654553	0.7058	0.6458	0.7896	0.6384	0.5368	0.73	0.62	0.76	0.6	0.6887	0.76	0.75	T	0.0	B	0.0	B	0.085	N	1.000	P	-2.225	N	-0.45	T	-0.967	T	0.000	T	0.236	-1.785	0.01	1.13	0.141	-0.141	3.502	-1.785426	NA	1	0.713837	0.664775	NA	0.754	NA	5.2249964
1130	20	50255849	50255849	A	C	intronic	ATP9A	NA	NA	NA	intronic	ENSG00000054793	NA	NA	NA	NA	NA	20q13.2	NA	Name=CTCF,SMC3_(ab9263),c-Myc,CTCF_(SC-5916)	Name=143	NA	rs6063682	0.17	0.17	0.155	0.169728	0.2584	0.004	0.1844	0.2186	0.1728	0.25	0.0035	0.2	0.22	0.2403	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.460884	NA	NA	0.276512	0.246028	NA	0.109	NA	5.224788
1130	11	117869670	117869670	A	G	exonic	IL10RA	NA	nonsynonymous SNV	IL10RA:NM_001558:exon7:c.A1051G:p.R351G	exonic	ENSG00000110324	NA	nonsynonymous SNV	ENSG00000110324:ENST00000545409:exon6:c.A604G:p.R202G,ENSG00000110324:ENST00000227752:exon7:c.A1051G:p.R351G,ENSG00000110324:ENST00000541785:exon8:c.A991G:p.R331G	NA	NA	11q23.3	NA	NA	NA	NA	rs2229113	0.81	0.81	0.814	0.811102	0.6829	0.9931	0.8141	0.8177	0.7444	0.68	0.99	0.78	0.83	0.7381	0.99	0.71	T	0.0	B	0.0	B	0.077	N	1.000	P	-1.32	N	1.77	T	-1.002	T	0.000	T	0.162	0.616	7.318	1.13	0.073	0.038	5.621	0.616388	NA	0.63	0.687616	0.808182	NA	0.797	NA	5.2247174
1130	3	179137273	179137273	A	G	exonic	GNB4	NA	synonymous SNV	GNB4:NM_021629:exon4:c.T117C:p.S39S	exonic	ENSG00000114450	NA	synonymous SNV	ENSG00000114450:ENST00000232564:exon4:c.T117C:p.S39S,ENSG00000114450:ENST00000468623:exon4:c.T117C:p.S39S,ENSG00000114450:ENST00000497513:exon5:c.T117C:p.S39S	NA	NA	3q26.33	Score=883;Name=V$YY1_01	NA	NA	NA	rs1362650	0.46	0.46	0.463	0.473043	0.5	0.4365	0.5058	0.4455	0.4969	0.49	0.46	0.48	0.41	0.4731	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.276688	NA	NA	0.469302	0.458693	NA	0.362	NA	5.2242646
1130	2	159913358	159913358	T	C	intronic	TANC1	NA	NA	NA	ncRNA_exonic	ENSG00000226878	NA	NA	NA	Score=592;Name=lod=340	NA	2q24.2	NA	NA	NA	NA	rs78909034	0.08	0.08	0.084	0.0782748	0.1093	0.0575	0.0634	0.0802	0.0757	0.09	0.05	0.07	0.08	NA	0.098	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.024351	2.024351	NA	NA	NA	NA	0.08	NA	5.2240333
1130	17	560221	560221	G	A	intronic	VPS53	NA	NA	NA	ncRNA_exonic	ENSG00000244097	NA	NA	NA	Score=803;Name=lod=2456	NA	17p13.3	NA	NA	NA	NA	rs58445115	0.13	0.13	0.136	0.0936502	0.1093	0.1835	0.0821	0.0575	0.0419	0.11	0.23	0.12	0.08	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.074486	NA	NA	NA	NA	NA	0.08	NA	5.2240333
1130	22	45748339	45748339	A	G	exonic	SMC1B	NA	synonymous SNV	SMC1B:NM_148674:exon22:c.T3417C:p.A1139A	exonic	ENSG00000077935	NA	synonymous SNV	ENSG00000077935:ENST00000357450:exon22:c.T3417C:p.A1139A	Score=493;Name=lod=135	NA	22q13.31	NA	NA	NA	NA	rs5765275	0.35	0.35	0.326	0.289736	0.494	0.2946	0.4683	0.0499	0.272	0.51	0.33	0.43	0.07	0.4313	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.238852	1.238852	NA	0.518	0.114136	NA	0.196	NA	5.2233666
1130	15	58838038	58838038	C	G	exonic	LIPC	NA	synonymous SNV	LIPC:NM_000236:exon5:c.C672G:p.T224T	exonic	ENSG00000166035	NA	synonymous SNV	ENSG00000166035:ENST00000433326:exon4:c.C489G:p.T163T,ENSG00000166035:ENST00000299022:exon5:c.C672G:p.T224T,ENSG00000166035:ENST00000414170:exon6:c.C672G:p.T224T,ENSG00000166035:ENST00000356113:exon7:c.C672G:p.T224T	NA	NA	15q21.3	Score=792;Name=V$HEN1_01	NA	NA	NA	rs6084	0.33	0.33	0.299	0.303514	0.5	0.0774	0.4467	0.2156	0.3517	0.52	0.06	0.46	0.25	0.4289	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.801099	NA	NA	0.514678	0.24521	NA	0.457	NA	5.2230886
1130	15	42010625	42010625	G	A	intronic	MGA	NA	NA	NA	ncRNA_exonic	ENSG00000270702	NA	NA	NA	Score=663;Name=lod=658	NA	15q15.1	NA	NA	NA	NA	rs150379976	0.06	0.06	0.04	0.0652955	0.1103	0.0179	0.1066	0.0045	0.1207	0.1	0.01	0.11	0.01	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.7654	NA	NA	NA	NA	NA	0.094	NA	5.2230333
1130	9	33001449	33001449	C	A	UTR5	APTX	NM_001195249:c.-11560G>T	NA	NA	UTR5	ENSG00000137074	ENST00000494649:c.-11560G>T,ENST00000463596:c.-11560G>T	NA	NA	NA	NA	9p21.1	NA	Name=TBP,NFKB,YY1,Pol2-4H8,c-Fos,ZNF263,Pol2(b),ELK4,GTF2F1_(RAP-74),Pol2,YY1_(C-20),GATA-1,TAF1,WHIP	Name=6	NA	rs1197774	0.59	0.59	0.618	0.593251	0.5109	0.5615	0.4769	0.8555	0.4387	0.5	0.55	0.49	0.85	0.5995	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.007595	NA	NA	NA	NA	NA	0.63	NA	5.2229334
1130	2	203096545	203096545	C	A	intronic	SUMO1	NA	NA	NA	ncRNA_exonic	ENSG00000224463	NA	NA	NA	Score=620;Name=lod=442	NA	2q33.1	NA	NA	NA	NA	rs116081766	0.05	0.05	0.053	0.0395367	0.1113	NA	0.0605	0.0068	0.0358	0.11	NA	0.08	0.01	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.351705	NA	NA	NA	NA	NA	0.043	NA	5.2220333
1130	1	236647550	236647550	C	G	UTR3	EDARADD	NM_145861:c.*1601C>G,NM_080738:c.*1601C>G	NA	NA	ncRNA_exonic	ENSG00000244457	NA	NA	NA	Score=795;Name=lod=2274	NA	1q43	NA	NA	NA	NA	rs3916983	0.21	0.21	0.197	0.203275	0.2783	0.0942	0.2781	0.1309	0.2832	0.3	0.1	0.28	0.15	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.333296	NA	NA	NA	NA	NA	0.217	NA	5.2217
1130	3	130546582	130546582	T	C	intergenic	PIK3R4,ATP2C1	dist=80886;dist=22787	NA	NA	ncRNA_exonic	ENSG00000232829	NA	NA	NA	Score=473;Name=lod=112	NA	3q22.1	NA	NA	Name=2	NA	rs10934962	0.85	0.85	0.828	0.84385	0.7783	0.9196	0.8156	0.885	0.7975	0.79	0.93	0.81	0.86	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.438014	NA	NA	NA	NA	NA	0.717	NA	5.2217
1130	22	19471609	19471609	A	G	intronic	CDC45	NA	NA	NA	intronic	ENSG00000093009	NA	NA	NA	NA	NA	22q11.21	NA	Name=PU.1,GATA-2	Name=3	NA	rs737858	0.85	0.85	0.864	0.89377	0.7783	0.871	0.8703	0.9909	0.9213	0.78	0.85	0.82	0.99	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.213482	NA	NA	NA	NA	NA	0.804	NA	5.2217
1130	7	48314279	48314279	G	A	exonic	ABCA13	NA	synonymous SNV	ABCA13:NM_152701:exon17:c.G5016A:p.K1672K	exonic	ENSG00000179869	NA	synonymous SNV	ENSG00000179869:ENST00000435803:exon17:c.G5016A:p.K1672K	NA	NA	7p12.3	NA	NA	NA	NA	rs6955212	0.18	0.18	0.161	0.193291	0.1322	0.2153	0.2709	0.1498	0.2372	0.13	0.23	0.25	0.17	0.1713	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.216935	NA	NA	0.141709	0.153624	NA	0.159	NA	5.2214576
1130	17	71754741	71754741	G	C	ncRNA_intronic	LINC00469	NA	NA	NA	ncRNA_intronic	ENSG00000177338	NA	NA	NA	NA	NA	17q25.1	NA	NA	Name=8	NA	rs2683132	0.53	0.53	0.527	0.557508	0.4463	0.4067	0.5793	0.8026	0.4806	0.44	0.42	0.52	0.8	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011949	NA	NA	NA	NA	NA	0.638	NA	5.2203666
1130	22	18220831	18220831	A	G	exonic	BID	NA	synonymous SNV	BID:NM_001244570:exon3:c.T240C:p.N80N,BID:NM_001244572:exon3:c.T240C:p.N80N,BID:NM_001244569:exon4:c.T240C:p.N80N,BID:NM_197967:exon4:c.T240C:p.N80N,BID:NM_001196:exon5:c.T528C:p.N176N,BID:NM_001244567:exon5:c.T528C:p.N176N,BID:NM_197966:exon5:c.T666C:p.N222N	exonic	ENSG00000015475	NA	synonymous SNV	ENSG00000015475:ENST00000399765:exon3:c.T240C:p.N80N,ENSG00000015475:ENST00000399767:exon4:c.T240C:p.N80N,ENSG00000015475:ENST00000317361:exon5:c.T666C:p.N222N,ENSG00000015475:ENST00000399774:exon5:c.T528C:p.N176N,ENSG00000015475:ENST00000551952:exon5:c.T528C:p.N176N	NA	NA	22q11.21	NA	NA	NA	NA	rs11538	0.08	0.08	0.059	0.061901	0.1491	0.005	0.1052	0.0265	0.0481	0.16	0.01	0.11	0.02	0.1271	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.949725	NA	NA	0.170349	0.053563	NA	0.109	NA	5.2201176
1130	3	182853670	182853670	T	C	exonic	LAMP3	NA	nonsynonymous SNV	LAMP3:NM_014398:exon5:c.A952G:p.I318V	exonic	ENSG00000078081	NA	nonsynonymous SNV	ENSG00000078081:ENST00000265598:exon5:c.A952G:p.I318V,ENSG00000078081:ENST00000466939:exon5:c.A880G:p.I294V	NA	NA	3q27.1	NA	NA	NA	NA	rs482912	0.53	0.53	0.493	0.496406	0.7247	0.4712	0.5029	0.2224	0.6534	0.71	0.5	0.52	0.27	0.6483	0.74	1	T	0.0	B	0.001	B	0.398	N	0.146	P	-0.885	N	1.41	T	-0.967	T	0.000	T	0.042	-1.116	0.129	-1.37	-0.082	-0.439	9.487	-1.116168	NA	1	0.740233	0.30118	NA	0.42	NA	5.2201004
1130	14	70352817	70352817	G	A	intronic	SMOC1	NA	NA	NA	ncRNA_exonic	ENSG00000242071	NA	NA	NA	Score=799;Name=lod=2366	NA	14q24.2	NA	NA	NA	NA	rs56101942	0.11	0.11	0.08	0.105431	0.1133	0.1885	0.1715	0.0091	0.0951	0.12	0.16	0.14	0.01	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.32624	1.32624	NA	NA	NA	NA	0.152	NA	5.2200333
1130	7	142480002	142480002	C	A	exonic	PRSS2	NA	unknown	UNKNOWN	ncRNA_exonic	ENSG00000250606	NA	NA	NA	Score=456;Name=lod=95	NA	7q34	NA	NA	NA	NA	rs199512312	NA	NA	0.586	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.6135	0.076	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.709516	NA	1	NA	NA	NA	0.058	NA	5.2198333
1130	9	140777370	140777370	A	C	intronic	CACNA1B	NA	NA	NA	ncRNA_exonic	ENSG00000203987	NA	NA	NA	NA	NA	9q34.3	NA	Name=SUZ12,NRSF	Name=9	NA	rs1110146	NA	NA	0.648	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5581	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.366271	NA	NA	0.55549	0.716651	NA	0.659	NA	5.2197433
1130	7	138732457	138732457	G	A	exonic	ZC3HAV1	NA	synonymous SNV	ZC3HAV1:NM_020119:exon13:c.C2592T:p.F864F	exonic	ENSG00000105939	NA	synonymous SNV	ENSG00000105939:ENST00000242351:exon13:c.C2592T:p.F864F,ENSG00000105939:ENST00000464606:exon13:c.C2958T:p.F986F	NA	NA	7q34	Score=787;Name=V$MEIS1AHOXA9_01	NA	NA	NA	rs3735008	0.44	0.44	0.424	0.423722	0.493	0.3343	0.3501	0.475	0.4274	0.48	0.34	0.39	0.52	0.4534	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.101688	NA	NA	0.501163	0.470268	NA	0.391	NA	5.2191036
1130	10	95720490	95720490	C	T	ncRNA_exonic	PIPSL	NA	NA	NA	ncRNA_exonic	ENSG00000180764	NA	NA	NA	Score=648;Name=lod=572	NA	10q23.33	NA	NA	NA	NA	rs12570608	0.17	0.17	0.137	0.156949	0.2336	0.2282	0.1182	0.0113	0.229	0.24	0.24	0.15	0.02	0.2141	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.504395	1.504395	0.22	NA	NA	NA	0.109	NA	5.2189666
1130	13	98087096	98087096	T	C	intronic	RAP2A	NA	NA	NA	intronic	ENSG00000125249	NA	NA	NA	NA	NA	13q32.1	NA	Name=TAF1,E2F6_(H-50),Pol2,E2F6,ZBTB7A_(SC-34508),NFKB,Ini1	Name=99	NA	rs3803251	0.8	0.8	0.826	0.823482	0.7813	0.7202	0.7795	0.9312	0.8589	0.78	0.74	0.8	0.91	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.808016	1.808016	NA	NA	NA	NA	0.645	NA	5.2187
1130	5	157166649	157166649	G	A	UTR3	THG1L	NM_017872:c.*159G>A	NA	NA	UTR3	ENSG00000113272	ENST00000231198:c.*159G>A,ENST00000523575:c.*416G>A	NA	NA	NA	NA	5q33.3	Score=746;Name=V$PAX4_04	NA	NA	NA	rs11550594	0.06	0.06	0.051	0.058107	0.1153	NA	0.0692	0.0204	0.1022	0.12	NA	0.09	0.02	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.182865	NA	NA	NA	NA	NA	0.014	NA	5.2180334
1130	12	95494760	95494760	A	C	intronic	FGD6	NA	NA	NA	ncRNA_exonic	ENSG00000257121	NA	NA	NA	Score=567;Name=lod=269	NA	12q22	NA	NA	NA	NA	rs4762452	0.17	0.17	0.165	0.171326	0.1153	0.1538	0.1931	0.2307	0.1513	0.11	0.18	0.21	0.23	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.471482	NA	NA	NA	NA	NA	0.138	NA	5.2180333
1130	2	206610502	206610502	T	G	exonic	NRP2	NA	synonymous SNV	NRP2:NM_003872:exon10:c.T1674G:p.P558P,NRP2:NM_018534:exon10:c.T1674G:p.P558P,NRP2:NM_201266:exon10:c.T1674G:p.P558P,NRP2:NM_201267:exon10:c.T1674G:p.P558P,NRP2:NM_201279:exon10:c.T1674G:p.P558P	exonic	ENSG00000118257	NA	synonymous SNV	ENSG00000118257:ENST00000272849:exon10:c.T1674G:p.P558P,ENSG00000118257:ENST00000357118:exon10:c.T1674G:p.P558P,ENSG00000118257:ENST00000357785:exon10:c.T1674G:p.P558P,ENSG00000118257:ENST00000360409:exon10:c.T1674G:p.P558P,ENSG00000118257:ENST00000412873:exon10:c.T1674G:p.P558P,ENSG00000118257:ENST00000540178:exon10:c.T1674G:p.P558P,ENSG00000118257:ENST00000540841:exon10:c.T1674G:p.P558P	NA	NA	2q33.3	NA	NA	NA	NA	rs849563	0.24	0.24	0.239	0.25599	0.1223	0.4593	0.2176	0.205	0.2802	0.13	0.46	0.21	0.2	0.1861	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.409258	1.409258	NA	0.141395	0.188833	NA	0.174	NA	5.2168716
1130	20	31386347	31386347	T	C	exonic	DNMT3B	NA	synonymous SNV	DNMT3B:NM_001207056:exon12:c.T1284C:p.C428C,DNMT3B:NM_001207055:exon13:c.T1386C:p.C462C,DNMT3B:NM_175848:exon14:c.T1512C:p.C504C,DNMT3B:NM_175849:exon14:c.T1512C:p.C504C,DNMT3B:NM_175850:exon14:c.T1548C:p.C516C,DNMT3B:NM_006892:exon15:c.T1572C:p.C524C	exonic	ENSG00000088305	NA	synonymous SNV	ENSG00000088305:ENST00000456297:exon12:c.T1284C:p.C428C,ENSG00000088305:ENST00000443239:exon13:c.T1386C:p.C462C,ENSG00000088305:ENST00000201963:exon14:c.T1548C:p.C516C,ENSG00000088305:ENST00000344505:exon14:c.T1512C:p.C504C,ENSG00000088305:ENST00000348286:exon14:c.T1512C:p.C504C,ENSG00000088305:ENST00000353855:exon14:c.T1512C:p.C504C,ENSG00000088305:ENST00000328111:exon15:c.T1572C:p.C524C	Score=535;Name=lod=199	NA	20q11.21	NA	NA	NA	NA	rs6058891	0.71	0.71	0.7	0.755791	0.4205	0.9931	0.6599	0.913	0.7117	0.43	0.99	0.64	0.88	0.5806	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.77216	1.77216	NA	0.44907	0.832955	NA	0.616	NA	5.2164966
1130	1	203774793	203774793	C	T	intronic	ZC3H11A	NA	NA	NA	ncRNA_exonic	ENSG00000227417	NA	NA	NA	Score=680;Name=lod=776	NA	1q32.1	NA	NA	NA	NA	rs7532505	0.17	0.17	0.145	0.183307	0.1173	0.2887	0.3199	0.0484	0.228	0.12	0.3	0.25	0.04	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.720359	1.720359	NA	NA	NA	NA	0.181	NA	5.2160333
1130	20	57569860	57569860	C	G	UTR3	NELFCD	NM_198976:c.*129C>G	NA	NA	UTR3	ENSG00000101158	ENST00000602795:c.*129C>G,ENST00000344018:c.*129C>G,ENST00000460601:c.*129C>G	NA	NA	NA	NA	20q13.32	NA	Name=Pol2-4H8	NA	NA	rs1043219	0.1	0.1	0.097	0.107029	0.1183	0.1389	0.17	0.0106	0.1483	0.12	0.12	0.15	0.01	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.361073	NA	NA	NA	NA	NA	0.072	NA	5.2150334
1131	10	95720501	95720501	T	C	ncRNA_exonic	PIPSL	NA	NA	NA	ncRNA_exonic	ENSG00000180764	NA	NA	NA	Score=648;Name=lod=572	NA	10q23.33	NA	NA	NA	NA	rs12571819	0.18	0.18	0.147	0.169329	0.2336	0.2292	0.1254	0.0537	0.229	0.24	0.24	0.16	0.05	0.2183	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.210391	NA	0.31	NA	NA	NA	0.116	NA	5.2147666
1131	1	21571601	21571601	G	A	intronic	ECE1	NA	NA	NA	intronic	ENSG00000117298	NA	NA	NA	NA	NA	1p36.12	NA	Name=CTCFL_(SC-98982),ZBTB7A_(SC-34508),Rad21,CTCF	Name=8	NA	rs12562197	0.17	0.17	0.147	0.160144	0.2664	0.129	0.2781	0.028	0.1779	0.26	0.12	0.25	0.03	0.2405	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.145988	NA	NA	0.278721	0.069905	NA	0.13	NA	5.214379
1131	5	170626735	170626735	A	G	exonic	RANBP17	NA	synonymous SNV	RANBP17:NM_022897:exon19:c.A2100G:p.V700V	exonic	ENSG00000204764	NA	synonymous SNV	ENSG00000204764:ENST00000523189:exon19:c.A2100G:p.V700V	NA	NA	5q35.1	NA	NA	NA	NA	rs35724654	0.08	0.08	0.06	0.0644968	0.173	0.001	0.0634	0.0098	0.093	0.18	NA	0.08	0.01	0.1173	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.278792	NA	NA	0.162558	0.032002	NA	0.051	NA	5.2138086
1131	3	18419859	18419859	G	A	intronic	SATB1	NA	NA	NA	intronic	ENSG00000182568	NA	NA	NA	Score=536;Name=lod=201	NA	3p24.3	NA	Name=p300	Name=4	NA	rs10460976	0.68	0.68	0.668	0.688299	0.5706	0.9216	0.7291	0.5802	0.6861	0.57	0.93	0.68	0.56	0.6373	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.96276	2.96276	NA	0.578953	0.585338	NA	0.638	NA	5.213147
1131	2	74534691	74534691	T	C	intronic	SLC4A5	NA	NA	NA	ncRNA_exonic	ENSG00000229798	NA	NA	NA	Score=346;Name=lod=34	NA	2p13.1	NA	NA	NA	NA	rs9789404	0.29	0.29	0.303	0.310903	0.1203	0.4425	0.1744	0.4902	0.226	0.12	0.47	0.18	0.45	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.53863	NA	NA	NA	NA	NA	0.275	NA	5.2130333
1131	9	141071552	141071552	C	T	ncRNA_exonic	TUBBP5	NA	NA	NA	ncRNA_exonic	ENSG00000159247	NA	NA	NA	Score=845;Name=lod=3610	NA	9q34.3	NA	NA	NA	NA	rs11137403	0.32	0.32	0.24	0.324281	0.4543	0.3185	0.5389	0.0719	0.3855	0.43	0.27	0.45	0.08	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.134216	NA	0	NA	NA	ID=COSM1497006;OCCURENCE=1(kidney)	0.304	NA	5.2123666
1131	11	5474838	5474838	G	T	exonic	OR51I2	NA	synonymous SNV	OR51I2:NM_001004754:exon1:c.G120T:p.G40G	exonic	ENSG00000187918	NA	synonymous SNV	ENSG00000187918:ENST00000341449:exon1:c.G120T:p.G40G	NA	NA	11p15.4	Score=800;Name=V$GFI1_01	NA	NA	NA	rs2030094	0.41	0.41	0.396	0.402157	0.5	0.2589	0.4539	0.4516	0.3456	0.52	0.27	0.45	0.37	0.4493	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.959537	NA	NA	0.506167	0.466379	ID=COSM1354368;OCCURENCE=1(large_intestine)	0.464	NA	5.2111996
1131	9	99580199	99580199	A	G	UTR3	ZNF782	NM_001001662:c.*6T>C	NA	NA	UTR3	ENSG00000196597	ENST00000481138:c.*6T>C,ENST00000535338:c.*6T>C,ENST00000289032:c.*6T>C	NA	NA	NA	NA	9q22.33	NA	Name=KAP1	NA	NA	rs73654606	0.18	0.18	0.226	0.185703	0.0258	0.2083	0.0562	0.4334	0.0838	0.03	0.25	0.06	0.44	0.0771	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.210642	NA	NA	0.019302	0.376022	ID=COSN168615;OCCURENCE=1(large_intestine)	0.152	NA	5.2111314
1131	1	117076399	117076399	T	C	intronic	CD58	NA	NA	NA	ncRNA_exonic	ENSG00000177173	NA	NA	NA	Score=590;Name=lod=333	NA	1p13.1	NA	NA	NA	NA	rs1034920	0.27	0.27	0.244	0.291534	0.1223	0.5575	0.2896	0.1679	0.3599	0.12	0.58	0.21	0.17	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.061787	NA	NA	NA	NA	NA	0.239	NA	5.2110333
1131	1	117076403	117076403	G	A	intronic	CD58	NA	NA	NA	ncRNA_exonic	ENSG00000177173	NA	NA	NA	Score=590;Name=lod=333	NA	1p13.1	NA	NA	NA	NA	rs1034921	0.27	0.27	0.242	0.291134	0.1223	0.5556	0.2896	0.1679	0.3599	0.12	0.58	0.21	0.17	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.147197	NA	NA	NA	NA	NA	0.239	NA	5.2110333
1131	1	117076461	117076461	T	C	intronic	CD58	NA	NA	NA	ncRNA_exonic	ENSG00000177173	NA	NA	NA	Score=590;Name=lod=333	NA	1p13.1	NA	NA	NA	NA	rs10802192	0.27	0.27	0.265	0.291534	0.1223	0.5575	0.2896	0.1679	0.3599	0.12	0.58	0.21	0.17	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.574265	NA	NA	NA	NA	NA	0.239	NA	5.2110333
1131	1	117076547	117076547	G	T	intronic	CD58	NA	NA	NA	ncRNA_exonic	ENSG00000177173	NA	NA	NA	Score=590;Name=lod=333	NA	1p13.1	NA	NA	NA	NA	rs1016140	0.27	0.27	0.272	0.291534	0.1223	0.5575	0.2896	0.1679	0.3599	0.12	0.58	0.21	0.17	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.527494	NA	NA	NA	NA	NA	0.239	NA	5.2110333
1131	17	20015428	20015428	G	A	intronic	SPECC1	NA	NA	NA	ncRNA_exonic	ENSG00000225014	NA	NA	NA	Score=620;Name=lod=443	NA	17p11.2	NA	NA	NA	NA	rs9902683	0.1	0.1	0.092	0.111422	0.1223	0.0962	0.1427	0.0855	0.1288	0.13	0.09	0.12	0.08	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.555338	NA	NA	NA	NA	NA	0.145	NA	5.2110333
1131	6	150239330	150239330	C	T	exonic	RAET1G	NA	synonymous SNV	RAET1G:NM_001001788:exon4:c.G822A:p.R274R	exonic	ENSG00000203722	NA	synonymous SNV	ENSG00000203722:ENST00000367360:exon4:c.G822A:p.R274R	NA	NA	6q25.1	NA	NA	NA	NA	rs17079029	0.23	0.23	0.215	0.227037	0.1511	0.5367	0.111	0.1021	0.2372	0.13	0.54	0.13	0.1	0.1732	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.65778	NA	NA	0.131512	0.110985	NA	0.268	NA	5.2108546
1131	9	38395928	38395928	C	T	exonic	ALDH1B1	NA	synonymous SNV	ALDH1B1:NM_000692:exon2:c.C183T:p.T61T	exonic	ENSG00000137124	NA	synonymous SNV	ENSG00000137124:ENST00000377698:exon2:c.C183T:p.T61T	NA	NA	9p13.2	NA	NA	NA	NA	rs2073477	0.24	0.24	0.236	0.267772	0.1372	0.3899	0.2968	0.2292	0.3078	0.14	0.4	0.25	0.23	0.1919	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.569063	NA	NA	0.126977	0.2399	ID=COSM1240833;OCCURENCE=1(oesophagus)	0.167	NA	5.2105896
1131	19	11708464	11708464	G	C	intronic	ZNF627	NA	NA	NA	intronic	ENSG00000198551	NA	NA	NA	NA	NA	19p13.2	NA	Name=HEY1,ZNF263,Pol2-4H8,Sin3Ak-20,Pol2(b),CHD2_(N-1250),Oct-2,ELF1_(SC-631),TAF7_(SQ-8),TCF4,Pol2(phosphoS2),Pol2,GABP,POU2F2,TAF1,ETS1	Name=148	NA	rs72997090	0.22	0.22	0.212	0.209065	0.2634	0.1617	0.2968	0.152	0.2168	0.25	0.17	0.31	0.16	0.2577	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.095735	NA	NA	0.268527	0.162769	NA	0.254	NA	5.210373
1131	19	51917735	51917735	G	A	exonic	SIGLEC10	NA	synonymous SNV	SIGLEC10:NM_001171161:exon7:c.C921T:p.N307N,SIGLEC10:NM_001171157:exon8:c.C1365T:p.N455N,SIGLEC10:NM_001171158:exon8:c.C1221T:p.N407N,SIGLEC10:NM_001171159:exon8:c.C1191T:p.N397N,SIGLEC10:NM_001171156:exon9:c.C1476T:p.N492N,SIGLEC10:NM_033130:exon9:c.C1650T:p.N550N	exonic	ENSG00000142512	NA	synonymous SNV	ENSG00000142512:ENST00000442846:exon7:c.C921T:p.N307N,ENSG00000142512:ENST00000525998:exon7:c.C1095T:p.N365N,ENSG00000142512:ENST00000353836:exon8:c.C1365T:p.N455N,ENSG00000142512:ENST00000436984:exon8:c.C1221T:p.N407N,ENSG00000142512:ENST00000441969:exon8:c.C1191T:p.N397N,ENSG00000142512:ENST00000339313:exon9:c.C1650T:p.N550N,ENSG00000142512:ENST00000356298:exon9:c.C1650T:p.N550N,ENSG00000142512:ENST00000432469:exon9:c.C1116T:p.N372N,ENSG00000142512:ENST00000439889:exon9:c.C1476T:p.N492N	NA	NA	19q13.41	NA	NA	NA	NA	rs1974821	0.2	0.2	0.21	0.228035	0.1451	0.2113	0.1816	0.3404	0.2117	0.14	0.19	0.16	0.32	0.1716	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.078226	NA	NA	0.140349	0.319337	ID=COSM148696,COSM148695;OCCURENCE=1(stomach)	0.203	NA	5.2096176
1131	21	46102015	46102015	C	T	exonic	KRTAP12-1	NA	synonymous SNV	KRTAP12-1:NM_181686:exon1:c.G24A:p.S8S	exonic	ENSG00000187175	NA	synonymous SNV	ENSG00000187175:ENST00000391617:exon1:c.G24A:p.S8S	NA	NA	21q22.3	NA	NA	NA	NA	rs7283084	0.13	0.13	0.113	0.146765	0.1461	0.0813	0.121	0.1838	0.183	0.15	0.08	0.12	0.17	0.1533	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.088111	NA	NA	0.157709	0.160185	NA	0.08	NA	5.2095576
1131	4	186097045	186097045	C	T	exonic	KIAA1430	NA	synonymous SNV	KIAA1430:NM_020827:exon3:c.G1215A:p.P405P	exonic	ENSG00000164323	NA	synonymous SNV	ENSG00000164323:ENST00000296775:exon3:c.G1215A:p.P405P,ENSG00000164323:ENST00000458385:exon3:c.G1215A:p.P405P,ENSG00000164323:ENST00000514798:exon3:c.G1215A:p.P405P	Score=614;Name=lod=416	NA	4q35.1	NA	NA	NA	NA	rs6855305	0.5	0.5	0.471	0.505591	0.505	0.3998	0.464	0.6573	0.4397	0.52	0.36	0.51	0.63	0.4846	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.906124	NA	NA	0.467663	0.611624	NA	0.428	NA	5.2094036
1131	7	47436497	47436497	G	A	exonic	TNS3	NA	synonymous SNV	TNS3:NM_022748:exon16:c.C924T:p.S308S	exonic	ENSG00000136205	NA	synonymous SNV	ENSG00000136205:ENST00000311160:exon16:c.C924T:p.S308S,ENSG00000136205:ENST00000398879:exon16:c.C924T:p.S308S,ENSG00000136205:ENST00000450444:exon16:c.C1191T:p.S397S,ENSG00000136205:ENST00000457718:exon16:c.C1233T:p.S411S	NA	NA	7p12.3	NA	NA	NA	NA	rs17544028	0.11	0.11	0.09	0.110823	0.159	0.0764	0.1513	0.034	0.1718	0.16	0.08	0.16	0.02	0.1438	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.521313	NA	NA	0.155371	0.046335	NA	0.036	NA	5.2084956
1131	10	47087474	47087474	C	T	exonic	NPY4R	NA	synonymous SNV	NPY4R:NM_005972:exon3:c.C691T:p.L231L	exonic	ENSG00000204174	NA	synonymous SNV	ENSG00000204174:ENST00000395716:exon2:c.C691T:p.L231L,ENSG00000204174:ENST00000374312:exon3:c.C691T:p.L231L	Score=500;Name=lod=143	NA	10q11.22	NA	NA	NA	NA	rs1129838	0.83	0.83	0.839	NA	NA	NA	NA	NA	NA	0.72	0.99	0.82	0.81	0.7542	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.287305	NA	NA	0.70407	0.779619	NA	0.754	NA	5.2083966
1131	16	56691893	56691893	G	T	UTR5	MT1F	NM_005949:c.-78G>T	NA	NA	UTR5	ENSG00000198417	ENST00000334350:c.-78G>T,ENST00000394501:c.-78G>T	NA	NA	NA	NA	16q12.2	NA	Name=Pol2,TAF1	NA	NA	rs186322428	0.07	0.07	NA	0.0678914	0.1252	0.0129	0.0908	0.0197	0.1145	0.13	0.0035	0.09	0.02	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.358152	NA	NA	NA	NA	NA	0.072	NA	5.2081334
1131	22	43830996	43830996	C	T	exonic	MPPED1	NA	synonymous SNV	MPPED1:NM_001044370:exon3:c.C267T:p.Y89Y	exonic	ENSG00000186732	NA	synonymous SNV	ENSG00000186732:ENST00000334209:exon3:c.C267T:p.Y89Y,ENSG00000186732:ENST00000417669:exon3:c.C267T:p.Y89Y,ENSG00000186732:ENST00000443721:exon3:c.C267T:p.Y89Y,ENSG00000186732:ENST00000538182:exon3:c.C366T:p.Y122Y,ENSG00000186732:ENST00000542779:exon3:c.C267T:p.Y89Y	Score=543;Name=lod=214	NA	22q13.2	NA	NA	NA	NA	rs2413761	0.37	0.37	0.396	0.354633	0.4861	0.0873	0.3919	0.4206	0.3793	0.48	0.1	0.43	0.47	0.4491	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.104196	NA	NA	0.523338	0.405525	NA	0.428	NA	5.2081286
1131	3	127379270	127379270	C	T	exonic	PODXL2	NA	synonymous SNV	PODXL2:NM_015720:exon3:c.C399T:p.T133T	exonic	ENSG00000114631	NA	synonymous SNV	ENSG00000114631:ENST00000342480:exon3:c.C399T:p.T133T	NA	NA	3q21.3	NA	NA	NA	NA	rs920232	0.16	0.16	0.162	0.16893	0.1392	0.1766	0.1744	0.1755	0.1789	0.14	0.17	0.17	0.17	0.1589	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.483781	NA	NA	0.16093	0.156605	NA	0.116	NA	5.2076366
1131	3	183904232	183904232	T	A	intronic	ABCF3	NA	NA	NA	intronic	ENSG00000145191,ENSG00000161204	NA	NA	NA	NA	NA	3q27.1	NA	Name=NRSF,Sin3Ak-20,STAT1	Name=47	NA	rs1709624	0.89	0.89	0.887	0.910743	0.7932	0.9692	0.8761	0.9947	0.8824	0.79	0.97	0.86	0.99	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.489253	NA	NA	NA	NA	NA	0.855	NA	5.2068
1131	9	131588813	131588813	C	G	intronic	C9orf114	NA	NA	NA	intronic	ENSG00000198917	NA	NA	NA	NA	NA	9q34.11	NA	Name=MafK_(ab50322),CTCF	Name=13	NA	rs6478853	0.32	0.32	0.326	0.382987	0.2535	0.2669	0.2118	0.643	0.4059	0.21	0.25	0.22	0.61	0.2892	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.376716	1.376716	NA	0.250698	0.576941	NA	0.348	NA	5.206602
1131	11	102678438	102678438	C	T	ncRNA_intronic	WTAPP1	NA	NA	NA	ncRNA_exonic	ENSG00000256035	NA	NA	NA	Score=753;Name=lod=1535	NA	11q22.2	NA	NA	NA	NA	rs526215	0.26	0.26	0.253	0.202875	0.4602	0.127	0.2968	0.0454	0.1626	0.45	0.15	0.34	0.04	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.019885	NA	NA	NA	NA	NA	0.304	NA	5.2064666
1131	4	113460927	113460927	C	A	intronic	C4orf21	NA	NA	NA	ncRNA_intronic	ENSG00000249509	NA	NA	NA	NA	NA	4q25	NA	NA	Name=5	NA	rs2306775	0.21	0.21	0.183	0.22524	0.1272	0.3929	0.2147	0.1566	0.2536	0.11	0.39	0.22	0.18	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.122383	NA	NA	NA	NA	NA	0.101	NA	5.2061333
1131	4	48582909	48582909	G	A	exonic	FRYL	NA	synonymous SNV	FRYL:NM_015030:exon22:c.C2232T:p.S744S	exonic	ENSG00000075539	NA	synonymous SNV	ENSG00000075539:ENST00000506685:exon12:c.C1350T:p.S450S,ENSG00000075539:ENST00000503238:exon19:c.C2232T:p.S744S,ENSG00000075539:ENST00000358350:exon22:c.C2232T:p.S744S,ENSG00000075539:ENST00000507711:exon22:c.C2232T:p.S744S,ENSG00000075539:ENST00000537810:exon22:c.C2232T:p.S744S	Score=634;Name=lod=503	NA	4p11	NA	NA	NA	NA	rs4695391	0.45	0.45	0.414	0.38738	0.5189	0.4464	0.5749	0.171	0.3507	0.52	0.5	0.6	0.19	0.4655	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.118426	NA	NA	0.476387	0.203871	NA	0.319	NA	5.2058796
1131	2	8822266	8822266	C	T	UTR5	ID2	NM_002166:c.-30C>T	NA	NA	UTR5	ENSG00000115738	ENST00000234091:c.-30C>T,ENST00000396290:c.-30C>T,ENST00000331129:c.-30C>T	NA	NA	NA	NA	2p25.1	NA	Name=POU2F2,HMGN3,TAL1_(SC-12984),JunD,FOSL2,TAF1,Pol2(b),E2F6_(H-50),ETS1,Sin3Ak-20,YY1_(C-20),BCLAF1_(M33-P5B11),TAF7_(SQ-8),ZNF263,MEF2A,HDAC2_(SC-6296),Pol2-4H8,NELFe,Pol2,NRSF,RFX5_(N-494),TCF4,Pol2(phosphoS2),SMC3_(ab9263),PAX5-N19,PAX5-C20,Oct-2,c-Myc,CCNT2,Rad21,NFKB,ZEB1_(SC-25388),HEY1,BCL3,TBP,GTF2F1_(RAP-74),CTCF,p300,THAP1_(SC-98174),EBF1_(C-8),USF-1,GTF2B	NA	NA	rs56393729	0.02	0.02	0.022	0.014976	0.0398	NA	0.0202	0.0008	0.0204	0.04	NA	0.02	0.002	0.0384	0.049	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.835929	1.835929	NA	0.04943	0.01	NA	0.022	NA	5.2057034
1131	15	90623052	90623052	T	C	exonic	ZNF710	NA	synonymous SNV	ZNF710:NM_198526:exon5:c.T1986C:p.N662N	exonic	ENSG00000140548	NA	synonymous SNV	ENSG00000140548:ENST00000268154:exon5:c.T1986C:p.N662N	Score=521;Name=lod=174	NA	15q26.1	NA	NA	NA	NA	rs2970357	0.62	0.62	0.608	0.672324	0.4751	0.8244	0.5778	0.7284	0.7096	0.45	0.81	0.57	0.68	0.541	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.360086	NA	NA	0.444974	0.724318	NA	0.558	NA	5.2055926
1131	3	124369650	124369650	T	C	intronic	KALRN	NA	NA	NA	intronic	ENSG00000160145	NA	NA	NA	Score=459;Name=lod=98	NA	3q21.2	NA	Name=BCL3	NA	NA	rs2291988	0.28	0.28	0.26	0.261182	0.2763	0.4345	0.2608	0.1649	0.1973	0.27	0.42	0.27	0.14	0.2591	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.459843	NA	NA	0.25907	0.149569	NA	0.196	NA	5.20553
1131	19	46341824	46341824	C	T	exonic	SYMPK	NA	synonymous SNV	SYMPK:NM_004819:exon10:c.G1137A:p.P379P	exonic	ENSG00000125755	NA	synonymous SNV	ENSG00000125755:ENST00000600237:exon9:c.G1137A:p.P379P,ENSG00000125755:ENST00000245934:exon10:c.G1137A:p.P379P	NA	NA	19q13.32	NA	NA	NA	NA	rs17850110	0.14	0.14	0.127	0.144968	0.1571	0.0952	0.2334	0.1074	0.1718	0.16	0.09	0.2	0.12	0.1567	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.312078	NA	NA	0.147791	0.108034	NA	0.072	NA	5.2050756
1132	5	176798306	176798306	G	A	intronic	RGS14	NA	NA	NA	intronic	ENSG00000169220	NA	NA	NA	NA	Name=Nephrolithiasis	5q35.3	NA	Name=Pol2,HEY1	NA	NA	rs11746443	0.19	0.19	0.164	0.177316	0.2823	0.1429	0.2262	0.0499	0.2423	0.28	0.17	0.25	0.06	0.2436	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.310568	1.310568	NA	0.269286	0.072569	NA	0.188	NA	5.204814
1132	8	23177619	23177619	C	A	intronic	LOXL2	NA	NA	NA	intronic	ENSG00000134013	NA	NA	NA	NA	NA	8p21.3	NA	Name=CTCF,Rad21,CTCF_(C-20),CTCF_(SC-5916)	Name=23	NA	rs13254579	0.73	0.73	0.726	0.698083	0.7952	0.7222	0.6974	0.6233	0.6748	0.79	0.72	0.74	0.63	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.068443	NA	NA	NA	NA	NA	0.725	NA	5.2048
1132	19	1119019	1119019	C	T	exonic	SBNO2	NA	synonymous SNV	SBNO2:NM_001100122:exon11:c.G1347A:p.A449A,SBNO2:NM_014963:exon14:c.G1518A:p.A506A	exonic	ENSG00000064932	NA	synonymous SNV	ENSG00000064932:ENST00000438103:exon11:c.G1347A:p.A449A,ENSG00000064932:ENST00000361757:exon14:c.G1518A:p.A506A,ENSG00000064932:ENST00000587024:exon14:c.G1518A:p.A506A	Score=471;Name=lod=109	NA	19p13.3	NA	NA	NA	NA	rs2074920	0.48	0.48	0.492	0.489018	0.4642	0.2371	0.6138	0.6793	0.4284	0.46	0.26	0.57	0.72	0.5329	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.616352	NA	NA	0.464902	0.679338	NA	0.391	NA	5.2046646
1132	6	32362669	32362669	T	G	exonic	BTNL2	NA	synonymous SNV	BTNL2:NM_019602:exon6:c.A1212C:p.S404S	exonic	ENSG00000204290	NA	synonymous SNV	ENSG00000204290:ENST00000414363:exon4:c.A582C:p.S194S,ENSG00000204290:ENST00000540315:exon4:c.A582C:p.S194S,ENSG00000204290:ENST00000544175:exon5:c.A381C:p.S127S,ENSG00000204290:ENST00000374993:exon6:c.A1212C:p.S404S,ENSG00000204290:ENST00000374995:exon6:c.A930C:p.S310S,ENSG00000204290:ENST00000454136:exon6:c.A1212C:p.S404S	NA	NA	6p21.32	NA	NA	NA	NA	rs41449245	0.16	0.16	0.151	0.163938	0.163	0.1587	0.1599	0.1422	0.2025	0.16	0.18	0.18	0.12	0.155	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.334357	NA	NA	0.144302	0.125057	NA	0.188	NA	5.2043646
1132	11	114454147	114454147	A	G	intronic	NXPE4	NA	NA	NA	ncRNA_exonic	ENSG00000256674	NA	NA	NA	Score=770;Name=lod=1791	NA	11q23.2	NA	NA	NA	NA	rs2292817	0.09	0.09	0.112	0.0876597	0.1292	0.0903	0.0821	0.0242	0.1319	0.13	0.11	0.09	0.03	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.577123	2.577123	NA	NA	NA	NA	0.036	NA	5.2041333
1132	1	248224754	248224754	T	C	exonic	OR2L3	NA	synonymous SNV	OR2L3:NM_001004687:exon1:c.T771C:p.T257T	exonic	ENSG00000198128	NA	synonymous SNV	ENSG00000198128:ENST00000359959:exon1:c.T771C:p.T257T	NA	NA	1q44	NA	NA	NA	NA	rs55893924	0.31	0.31	0.27	0.310503	0.1481	0.254	0.1326	0.7398	0.0818	0.15	0.3	0.14	0.69	0.1814	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.651075	NA	NA	0.133232	0.614163	NA	0.174	NA	5.2039346
1132	17	4684095	4684095	G	A	exonic	TM4SF5	NA	synonymous SNV	TM4SF5:NM_003963:exon2:c.G189A:p.P63P	exonic	ENSG00000142484	NA	synonymous SNV	ENSG00000142484:ENST00000270560:exon2:c.G189A:p.P63P	NA	NA	17p13.2	Score=765;Name=V$TCF11MAFG_01	NA	NA	NA	rs13520	0.35	0.35	0.343	0.326677	0.5089	0.1865	0.4337	0.1717	0.4172	0.49	0.19	0.48	0.21	0.4372	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.421527	NA	NA	0.51686	0.24217	NA	0.319	NA	5.2037066
1132	5	149826572	149826572	G	A	intronic	RPS14	NA	NA	NA	intronic	ENSG00000164587	NA	NA	NA	NA	NA	5q33.1	NA	Name=HEY1,Pol2(phosphoS2),Pol2-4H8	Name=4	NA	rs13183077	0.24	0.24	0.231	0.268371	0.2575	0.2669	0.2161	0.2027	0.407	0.26	0.28	0.23	0.2	0.2726	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.481122	NA	NA	0.266279	0.214934	ID=COSN167613;OCCURENCE=1(large_intestine)	0.341	NA	5.203621
1132	1	248224595	248224595	C	T	exonic	OR2L3	NA	synonymous SNV	OR2L3:NM_001004687:exon1:c.C612T:p.I204I	exonic	ENSG00000198128	NA	synonymous SNV	ENSG00000198128:ENST00000359959:exon1:c.C612T:p.I204I	NA	NA	1q44	NA	NA	NA	NA	rs71535242	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4631	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.388448	NA	NA	NA	NA	NA	0.014	NA	5.2035666
1132	22	46654323	46654323	G	A	exonic	PKDREJ	NA	synonymous SNV	PKDREJ:NM_006071:exon1:c.C4897T:p.L1633L	exonic	ENSG00000130943	NA	synonymous SNV	ENSG00000130943:ENST00000253255:exon1:c.C4897T:p.L1633L	NA	NA	22q13.31	NA	NA	NA	NA	rs6007740	0.22	0.22	0.243	0.240615	0.16	0.001	0.1297	0.6626	0.0787	0.15	NA	0.15	0.62	0.1576	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.90049	NA	NA	0.145698	0.585792	NA	0.297	NA	5.2033686
1132	22	46657798	46657798	A	G	exonic	PKDREJ	NA	synonymous SNV	PKDREJ:NM_006071:exon1:c.T1422C:p.D474D	exonic	ENSG00000130943	NA	synonymous SNV	ENSG00000130943:ENST00000253255:exon1:c.T1422C:p.D474D	NA	NA	22q13.31	NA	NA	NA	NA	rs6007748	0.22	0.22	0.238	0.239217	0.16	0.001	0.1326	0.6558	0.0787	0.15	NA	0.15	0.62	0.1575	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.078486	NA	NA	0.14593	0.576033	NA	0.297	NA	5.2032366
1132	22	46656805	46656805	G	A	exonic	PKDREJ	NA	synonymous SNV	PKDREJ:NM_006071:exon1:c.C2415T:p.I805I	exonic	ENSG00000130943	NA	synonymous SNV	ENSG00000130943:ENST00000253255:exon1:c.C2415T:p.I805I	NA	NA	22q13.31	NA	NA	NA	NA	rs6519994	0.21	0.21	0.243	0.23762	0.161	0.001	0.1297	0.6505	0.0787	0.15	NA	0.14	0.61	0.1567	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.68463	NA	NA	0.145814	0.570845	ID=COSM1416853;OCCURENCE=1(large_intestine)	0.297	NA	5.2031526
1132	2	203789679	203789679	C	T	intronic	ALS2CR8	NA	NA	NA	ncRNA_exonic	ENSG00000232479	NA	NA	NA	Score=728;Name=lod=1213	NA	2q33.2	NA	NA	NA	NA	rs72936870	0.07	0.07	0.07	0.0471246	0.1302	0.0159	0.0749	0.0174	0.0143	0.14	0.02	0.09	0.02	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.370897	NA	NA	NA	NA	NA	0.036	NA	5.2031333
1132	11	49598178	49598178	G	A	ncRNA_exonic	LOC440040	NA	NA	NA	ncRNA_exonic	ENSG00000205035	NA	NA	NA	Score=680;Name=lod=776	NA	11p11.12	NA	Name=MafK_(ab50322)	NA	NA	rs7101761	0.71	0.71	0.698	0.721446	0.7276	0.7143	0.7925	0.6293	0.7965	0.72	0.71	0.78	0.63	0.7361	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.732839	NA	NA	NA	NA	NA	0.667	NA	5.2029666
1132	7	134891961	134891961	G	A	intronic	WDR91	NA	NA	NA	intronic	ENSG00000105875	NA	NA	NA	NA	NA	7q33	NA	Name=Pol2,TBP	Name=18	NA	rs2278130	0.23	0.23	0.216	0.229034	0.2863	0.1776	0.1427	0.3071	0.1789	0.28	0.17	0.16	0.28	0.239	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.969312	NA	NA	0.271744	0.291875	NA	0.203	NA	5.202956
1132	22	46652737	46652737	G	A	exonic	PKDREJ	NA	synonymous SNV	PKDREJ:NM_006071:exon1:c.C6483T:p.C2161C	exonic	ENSG00000130943	NA	synonymous SNV	ENSG00000130943:ENST00000253255:exon1:c.C6483T:p.C2161C	NA	NA	22q13.31	NA	NA	NA	NA	rs6008362	0.21	0.21	0.254	0.240016	0.16	0.001	0.1297	0.6604	0.0787	0.15	NA	0.15	0.61	0.1578	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.37292	NA	NA	0.146047	0.583069	NA	0.29	NA	5.2028196
1132	1	179347832	179347832	T	C	exonic	AXDND1	NA	synonymous SNV	AXDND1:NM_144696:exon5:c.T435C:p.V145V	exonic	ENSG00000162779	NA	synonymous SNV	ENSG00000162779:ENST00000434088:exon3:c.T237C:p.V79V,ENSG00000162779:ENST00000509175:exon4:c.T309C:p.V103V,ENSG00000162779:ENST00000511889:exon4:c.T309C:p.V103V,ENSG00000162779:ENST00000367618:exon5:c.T435C:p.V145V,ENSG00000162779:ENST00000457238:exon5:c.T435C:p.V145V,ENSG00000162779:ENST00000511157:exon5:c.T435C:p.V145V	NA	NA	1q25.2	Score=827;Name=V$HNF4_01_B	NA	NA	NA	rs10798674	0.51	0.51	0.502	0.511781	0.5159	0.6974	0.5274	0.2799	0.6186	0.49	0.72	0.49	0.31	0.4845	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.867829	NA	NA	0.46407	0.320699	NA	0.442	NA	5.2021966
1132	9	79325759	79325759	C	T	exonic	PRUNE2	NA	synonymous SNV	PRUNE2:NM_015225:exon8:c.G1431A:p.V477V	exonic	ENSG00000106772	NA	synonymous SNV	ENSG00000106772:ENST00000376718:exon8:c.G1431A:p.V477V,ENSG00000106772:ENST00000428286:exon8:c.G354A:p.V118V	NA	NA	9q21.2	NA	NA	NA	NA	rs11145019	0.26	0.26	0.243	0.23762	0.1551	0.4653	0.1599	0.2103	0.18	0.15	0.5	0.14	0.22	0.1863	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.050815	NA	NA	0.123116	0.199936	NA	0.167	NA	5.2021506
1132	7	146864656	146864656	C	T	intronic	CNTNAP2	NA	NA	NA	ncRNA_exonic	ENSG00000232391	NA	NA	NA	Score=630;Name=lod=483	NA	7q35	NA	NA	NA	NA	rs13309902	0.07	0.07	0.062	0.0794728	0.1312	NA	0.0793	0.0643	0.1288	0.13	NA	0.09	0.05	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.369894	2.369894	NA	NA	NA	NA	0.087	NA	5.2021333
1132	22	46652929	46652929	G	A	exonic	PKDREJ	NA	synonymous SNV	PKDREJ:NM_006071:exon1:c.C6291T:p.S2097S	exonic	ENSG00000130943	NA	synonymous SNV	ENSG00000130943:ENST00000253255:exon1:c.C6291T:p.S2097S	NA	NA	22q13.31	NA	NA	NA	NA	rs6008365	0.21	0.21	0.239	0.242212	0.16	0.002	0.1297	0.6604	0.089	0.15	NA	0.15	0.61	0.1584	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.467341	NA	NA	0.146163	0.582615	NA	0.29	NA	5.2021036
1132	12	68708761	68708761	C	T	exonic	MDM1	NA	nonsynonymous SNV	MDM1:NM_001205028:exon9:c.G1361A:p.R454H,MDM1:NM_017440:exon9:c.G1466A:p.R489H	exonic	ENSG00000111554	NA	nonsynonymous SNV	ENSG00000111554:ENST00000540418:exon8:c.G626A:p.R209H,ENSG00000111554:ENST00000303145:exon9:c.G1466A:p.R489H,ENSG00000111554:ENST00000411698:exon9:c.G1361A:p.R454H	NA	NA	12q15	NA	NA	NA	NA	rs2306393	0.69	0.69	0.702	0.6873	0.7187	0.4504	0.7392	0.857	0.6329	0.71	0.47	0.75	0.86	0.6986	0.86	.	.	0.0	B	0.0	B	0.182	N	1.000	P	-0.205	N	2.0	T	-0.998	T	0.000	T	0.042	1.467	10.85	1.94	0.008	-0.038	4.464	1.466748	1.466748	0.16	0.714186	0.839083	NA	0.681	NA	5.2018474
1132	14	94929541	94929541	G	A	exonic	SERPINA9	NA	synonymous SNV	SERPINA9:NM_175739:exon5:c.C1197T:p.G399G,SERPINA9:NM_001042518:exon6:c.C897T:p.G299G	exonic	ENSG00000170054	NA	synonymous SNV	ENSG00000170054:ENST00000337425:exon5:c.C1197T:p.G399G,ENSG00000170054:ENST00000380365:exon5:c.C1143T:p.G381G,ENSG00000170054:ENST00000448305:exon5:c.C903T:p.G301G,ENSG00000170054:ENST00000298845:exon6:c.C897T:p.G299G,ENSG00000170054:ENST00000424550:exon6:c.C750T:p.G250G	NA	NA	14q32.13	NA	Name=RXRA,SP1	Name=2	NA	rs2224418	0.69	0.69	0.652	0.676118	0.8529	0.6478	0.7507	0.3752	0.8773	0.86	0.66	0.75	0.43	0.7771	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.272663	NA	NA	0.83488	0.483524	NA	0.696	NA	5.2017866
1132	3	159439565	159439565	C	T	intronic	IQCJ-SCHIP1,SCHIP1	NA	NA	NA	ncRNA_exonic	ENSG00000243116	NA	NA	NA	Score=693;Name=lod=873	NA	3q25.33	NA	NA	NA	NA	rs9865997	0.18	0.18	0.164	0.194089	0.1322	0.1498	0.2565	0.2572	0.1738	0.13	0.15	0.2	0.28	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.264941	NA	NA	NA	NA	NA	0.174	NA	5.2011333
1132	22	46657261	46657261	A	G	exonic	PKDREJ	NA	synonymous SNV	PKDREJ:NM_006071:exon1:c.T1959C:p.D653D	exonic	ENSG00000130943	NA	synonymous SNV	ENSG00000130943:ENST00000253255:exon1:c.T1959C:p.D653D	NA	NA	22q13.31	NA	NA	NA	NA	rs6007747	0.22	0.22	0.246	0.245407	0.16	0.001	0.134	0.6785	0.0787	0.15	NA	0.15	0.63	0.1597	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.77334	NA	NA	0.146163	0.600999	NA	0.304	NA	5.2008036
1132	19	52468998	52468998	A	G	exonic	ZNF350	NA	synonymous SNV	ZNF350:NM_021632:exon5:c.T708C:p.C236C	exonic	ENSG00000256683	NA	synonymous SNV	ENSG00000256683:ENST00000243644:exon5:c.T708C:p.C236C	NA	NA	19q13.41	NA	NA	NA	NA	rs4988334	0.2	0.2	0.228	0.227436	0.1521	0.2331	0.1499	0.2829	0.2791	0.17	0.2	0.13	0.31	0.1787	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.268768	NA	NA	0.135233	0.297095	NA	0.261	NA	5.2006336
1132	22	46656511	46656511	A	G	exonic	PKDREJ	NA	synonymous SNV	PKDREJ:NM_006071:exon1:c.T2709C:p.I903I	exonic	ENSG00000130943	NA	synonymous SNV	ENSG00000130943:ENST00000253255:exon1:c.T2709C:p.I903I	NA	NA	22q13.31	NA	NA	NA	NA	rs9627324	0.22	0.22	0.245	0.245407	0.16	0.001	0.134	0.6785	0.0787	0.15	NA	0.15	0.63	0.1598	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.240043	NA	NA	0.146395	0.602587	NA	0.304	NA	5.2004716
1132	22	46656607	46656607	G	A	exonic	PKDREJ	NA	synonymous SNV	PKDREJ:NM_006071:exon1:c.C2613T:p.I871I	exonic	ENSG00000130943	NA	synonymous SNV	ENSG00000130943:ENST00000253255:exon1:c.C2613T:p.I871I	NA	NA	22q13.31	NA	NA	NA	NA	rs8143066	0.22	0.22	0.251	0.245407	0.16	0.001	0.134	0.6785	0.0787	0.15	NA	0.15	0.63	0.1597	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.073572	NA	NA	0.146512	0.60236	NA	0.304	NA	5.2004546
1132	1	186275760	186275760	G	A	exonic	PRG4	NA	synonymous SNV	PRG4:NM_001127710:exon4:c.G507A:p.K169K,PRG4:NM_001127709:exon5:c.G630A:p.K210K,PRG4:NM_001127708:exon6:c.G786A:p.K262K,PRG4:NM_005807:exon7:c.G909A:p.K303K	exonic	ENSG00000116690	NA	synonymous SNV	ENSG00000116690:ENST00000367482:exon4:c.G507A:p.K169K,ENSG00000116690:ENST00000367485:exon5:c.G630A:p.K210K,ENSG00000116690:ENST00000367483:exon6:c.G786A:p.K262K,ENSG00000116690:ENST00000367484:exon6:c.G786A:p.K262K,ENSG00000116690:ENST00000367486:exon6:c.G780A:p.K260K,ENSG00000116690:ENST00000445192:exon7:c.G909A:p.K303K	NA	NA	1q31.1	NA	NA	NA	NA	rs16825150	0.16	0.16	0.171	0.177316	0.1521	0.131	0.0879	0.3101	0.135	0.15	0.11	0.1	0.27	0.1561	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.093987	NA	NA	0.158256	0.288697	NA	0.203	NA	5.2002106
1132	14	70352477	70352477	G	A	intronic	SMOC1	NA	NA	NA	ncRNA_exonic	ENSG00000242071	NA	NA	NA	Score=799;Name=lod=2366	NA	14q24.2	NA	NA	NA	NA	rs55954985	0.16	0.16	0.151	0.196885	0.1332	0.2212	0.1916	0.1369	0.3221	0.15	0.19	0.16	0.13	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.864845	NA	NA	NA	NA	NA	0.29	NA	5.2001333
1132	9	74825707	74825707	T	C	intronic	GDA	NA	NA	NA	intronic	ENSG00000119125	NA	NA	NA	NA	NA	9q21.13	NA	Name=Pbx3,STAT3	Name=16	NA	rs11143170	0.35	0.35	0.36	0.368011	0.2485	0.5357	0.2781	0.3676	0.3824	0.25	0.55	0.23	0.37	0.3003	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.033191	2.033191	NA	0.251395	0.382433	NA	0.225	NA	5.199805
1132	16	74920191	74920191	G	A	exonic	WDR59	NA	synonymous SNV	WDR59:NM_030581:exon24:c.C2523T:p.R841R	exonic	ENSG00000103091	NA	synonymous SNV	ENSG00000103091:ENST00000262144:exon24:c.C2523T:p.R841R	NA	NA	16q23.1	NA	NA	NA	NA	rs14308	0.11	0.11	0.097	0.0984425	0.167	0.001	0.111	0.143	0.0593	0.16	0.0017	0.12	0.15	0.1359	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.062113	NA	NA	0.164186	0.148999	NA	0.109	NA	5.1995806
1132	8	17918986	17918986	A	G	intronic	ASAH1	NA	NA	NA	intronic	ENSG00000104763	NA	NA	NA	NA	NA	8p22	NA	Name=ELF1_(SC-631),GABP,Pol2-4H8	Name=2	NA	rs17515291	0.26	0.26	0.233	0.261382	0.2704	0.3036	0.3357	0.0923	0.3845	0.27	0.3	0.35	0.11	0.2728	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.195812	NA	NA	0.257326	0.110985	NA	0.203	NA	5.199474
1132	7	92764982	92764982	C	T	exonic	SAMD9L	NA	synonymous SNV	SAMD9L:NM_152703:exon5:c.G303A:p.Q101Q	exonic	ENSG00000177409	NA	synonymous SNV	ENSG00000177409:ENST00000318238:exon5:c.G303A:p.Q101Q,ENSG00000177409:ENST00000411955:exon6:c.G303A:p.Q101Q,ENSG00000177409:ENST00000437805:exon6:c.G303A:p.Q101Q	NA	NA	7q21.2	NA	NA	NA	NA	rs1133906	0.39	0.39	0.381	0.381789	0.1193	0.5595	0.3631	0.6346	0.1401	0.12	0.58	0.34	0.61	0.2224	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.407973	NA	NA	0.125698	0.54335	NA	0.377	NA	5.1992686
1132	22	37387505	37387505	C	A	intronic	TEX33	NA	NA	NA	intronic	ENSG00000185264	NA	NA	NA	NA	NA	22q12.3	NA	Name=CTCF	Name=17	NA	rs9610625	0.23	0.23	0.186	0.238219	0.2674	0.0883	0.353	0.2738	0.2331	0.25	0.07	0.37	0.27	0.2538	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.29521	1.29521	NA	0.279651	0.293463	NA	0.217	NA	5.199149
1132	11	118432279	118432279	A	G	intronic	IFT46	NA	NA	NA	ncRNA_exonic	ENSG00000243431	NA	NA	NA	Score=809;Name=lod=2592	NA	11q23.3	NA	NA	NA	NA	rs11216897	0.24	0.24	0.211	0.272165	0.1342	0.5575	0.0821	0.1959	0.3579	0.13	0.52	0.09	0.18	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.218495	NA	NA	NA	NA	NA	0.196	NA	5.1991333
1132	3	185146702	185146702	C	T	exonic	MAP3K13	NA	synonymous SNV	MAP3K13:NM_004721:exon2:c.C333T:p.S111S,MAP3K13:NM_001242314:exon3:c.C333T:p.S111S	exonic	ENSG00000073803	NA	synonymous SNV	ENSG00000073803:ENST00000439882:exon1:c.C333T:p.S111S,ENSG00000073803:ENST00000265026:exon2:c.C333T:p.S111S,ENSG00000073803:ENST00000428617:exon2:c.C333T:p.S111S,ENSG00000073803:ENST00000433092:exon2:c.C333T:p.S111S,ENSG00000073803:ENST00000438053:exon2:c.C333T:p.S111S,ENSG00000073803:ENST00000424227:exon3:c.C333T:p.S111S,ENSG00000073803:ENST00000447637:exon3:c.C333T:p.S111S	NA	NA	3q27.2	NA	NA	NA	NA	rs3732577	0.22	0.22	0.121	0.147165	0.1581	0.2163	0.1354	0.0129	0.2546	0.25	0.25	0.17	0.16	0.158	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.312306	NA	NA	0.151744	0.039038	NA	0.152	NA	5.1988226
1132	20	47886684	47886684	G	A	exonic	ZNFX1	NA	synonymous SNV	ZNFX1:NM_021035:exon3:c.C1665T:p.Y555Y	exonic	ENSG00000124201	NA	synonymous SNV	ENSG00000124201:ENST00000455070:exon1:c.C1077T:p.Y359Y,ENSG00000124201:ENST00000371744:exon3:c.C1665T:p.Y555Y,ENSG00000124201:ENST00000371752:exon3:c.C1665T:p.Y555Y,ENSG00000124201:ENST00000371754:exon3:c.C1665T:p.Y555Y,ENSG00000124201:ENST00000396105:exon3:c.C1665T:p.Y555Y	Score=376;Name=lod=45	NA	20q13.13	Score=707;Name=V$HOX13_01	NA	NA	NA	rs57950	0.78	0.78	0.802	0.779353	0.841	0.621	0.7075	0.9425	0.7096	0.84	0.6	0.75	0.93	0.7911	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.091294	NA	NA	0.835814	0.921698	NA	0.775	NA	5.1987526
1132	19	53085659	53085659	C	T	exonic	ZNF701	NA	nonsynonymous SNV	ZNF701:NM_018260:exon4:c.C347T:p.T116I,ZNF701:NM_001172655:exon5:c.C545T:p.T182I	exonic	ENSG00000167562	NA	nonsynonymous SNV	ENSG00000167562:ENST00000391785:exon4:c.C347T:p.T116I,ENSG00000167562:ENST00000301093:exon5:c.C545T:p.T182I,ENSG00000167562:ENST00000540331:exon5:c.C545T:p.T182I,ENSG00000167562:ENST00000593941:exon5:c.C545T:p.T182I	NA	NA	19q13.41	NA	NA	NA	NA	rs366793	0.65	0.65	0.647	0.644169	0.7117	0.497	0.6182	0.6694	0.7106	0.72	0.51	0.65	0.71	0.6967	0.73	0.34	T	0.0	B	0.0	B	.	.	1.000	P	-1.095	N	3.51	T	-1.079	T	0.000	T	0.052	-0.885	0.47	-1.3	-0.539	0.077	3.692	-0.884709	NA	0.37	0.726395	0.668407	NA	0.681	NA	5.1985384
1132	1	38022452	38022452	C	A	upstream	DNALI1	NA	NA	NA	upstream;downstream	ENSG00000163879;ENSG00000237749	NA	NA	NA	NA	NA	1p34.3	NA	Name=ETS1,TAF1,FOXA1_(C-20),Egr-1,HEY1,IRF1,TBP	Name=130	NA	rs2273014	0.44	0.44	0.426	0.400559	0.4682	0.5675	0.5562	0.1952	0.3262	0.48	0.53	0.52	0.21	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.480337	NA	NA	NA	NA	NA	0.464	NA	5.1984666
1132	12	133389998	133389998	T	C	exonic	GOLGA3	NA	synonymous SNV	GOLGA3:NM_001172557:exon4:c.A414G:p.T138T,GOLGA3:NM_005895:exon4:c.A414G:p.T138T	exonic	ENSG00000090615	NA	synonymous SNV	ENSG00000090615:ENST00000450791:exon3:c.A414G:p.T138T,ENSG00000090615:ENST00000537452:exon3:c.A414G:p.T138T,ENSG00000090615:ENST00000204726:exon4:c.A414G:p.T138T,ENSG00000090615:ENST00000456883:exon4:c.A414G:p.T138T,ENSG00000090615:ENST00000545875:exon4:c.A414G:p.T138T	NA	NA	12q24.33	NA	NA	NA	NA	rs7134809	0.09	0.09	0.087	0.072484	0.171	0.0446	0.0735	0.0106	0.0828	0.17	0.05	0.08	0.02	0.1314	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.39309	NA	NA	0.167093	0.029278	NA	0.109	NA	5.1971736
1132	17	15645289	15645289	G	A	exonic	TBC1D26	NA	nonsynonymous SNV	TBC1D26:NM_178571:exon11:c.G700A:p.G234S	exonic	ENSG00000214946	NA	nonsynonymous SNV	ENSG00000214946:ENST00000437605:exon11:c.G700A:p.G234S,ENSG00000214946:ENST00000469477:exon11:c.G700A:p.G234S	NA	NA	17p12	NA	NA	NA	NA	rs17855672	0.26	0.26	0.226	0.246206	0.3946	0.254	0.2651	0.0809	0.2955	0.39	0.24	0.29	0.07	0.3445	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.317349	NA	NA	0.397322	0.12747	NA	0.239	NA	5.1969114
1132	14	74876181	74876181	T	G	exonic	SYNDIG1L	NA	synonymous SNV	SYNDIG1L:NM_001105579:exon2:c.A267C:p.T89T	exonic	ENSG00000183379	NA	synonymous SNV	ENSG00000183379:ENST00000554823:exon1:c.A267C:p.T89T,ENSG00000183379:ENST00000331628:exon2:c.A267C:p.T89T	Score=637;Name=lod=518	NA	14q24.3	NA	NA	NA	NA	rs12590672	0.48	0.48	0.467	0.460663	0.494	0.4454	0.4222	0.472	0.454	0.51	0.45	0.47	0.48	0.4777	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.893294	NA	NA	0.498062	0.4622	NA	0.435	NA	5.1969046
1132	19	21838657	21838657	G	A	intergenic	ZNF429,ZNF100	dist=117578;dist=68186	NA	NA	ncRNA_exonic	ENSG00000268278	NA	NA	NA	Score=371;Name=lod=43	NA	19p12	NA	Name=KAP1,ZNF274	NA	NA	rs7508494	0.79	0.79	0.751	0.773562	0.8032	0.8958	0.7839	0.5817	0.8691	0.81	0.88	0.81	0.63	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.887711	NA	1	NA	NA	NA	0.848	NA	5.1968
1132	1	54432019	54432019	G	A	exonic	LRRC42	NA	synonymous SNV	LRRC42:NM_052940:exon7:c.G978A:p.E326E,LRRC42:NM_001256409:exon8:c.G978A:p.E326E	exonic	ENSG00000116212	NA	synonymous SNV	ENSG00000116212:ENST00000319223:exon7:c.G978A:p.E326E,ENSG00000116212:ENST00000371370:exon8:c.G978A:p.E326E	NA	NA	1p32.3	NA	NA	NA	NA	rs2294514	0.25	0.25	0.266	0.259784	0.1451	0.0605	0.1254	0.7163	0.0613	0.15	0.07	0.13	0.7	0.1752	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.786818	NA	NA	0.150116	0.59419	NA	0.283	NA	5.1962506
1132	15	42749476	42749476	C	T	UTR5	ZNF106	NM_022473:c.-73G>A	NA	NA	UTR5	ENSG00000103994	ENST00000263805:c.-73G>A,ENST00000565611:c.-8586G>A,ENST00000565948:c.-5727G>A	NA	NA	NA	NA	15q15.1	NA	Name=EBF1_(C-8),EBF	NA	NA	rs62022313	0.07	0.07	0.065	0.0523163	0.1372	0.005	0.1037	0.0068	0.0389	0.13	NA	0.12	0.01	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.449724	NA	NA	NA	NA	NA	0.08	NA	5.1961334
1132	17	40481529	40481529	G	C	intronic	STAT3	NA	NA	NA	intronic	ENSG00000168610	NA	NA	NA	NA	Name=Multiple sclerosis	17q21.2	NA	Name=TCF12,TBP,NANOG_(SC-33759),Pol2-4H8,c-Fos,RXRA,TAF1,SP1	Name=115	NA	rs2293152	0.62	0.62	0.689	0.653754	0.5964	0.5198	0.513	0.888	0.6339	0.59	0.5	0.52	0.88	0.6025	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.623618	NA	NA	0.605233	0.849296	NA	0.674	NA	5.195867
1132	6	90340276	90340276	G	A	exonic	ANKRD6	NA	synonymous SNV	ANKRD6:NM_001242814:exon13:c.G1545A:p.S515S,ANKRD6:NM_001242813:exon15:c.G1632A:p.S544S,ANKRD6:NM_001242809:exon16:c.G1737A:p.S579S,ANKRD6:NM_001242811:exon16:c.G1737A:p.S579S,ANKRD6:NM_014942:exon16:c.G1722A:p.S574S	exonic	ENSG00000135299	NA	synonymous SNV	ENSG00000135299:ENST00000520793:exon13:c.G1545A:p.S515S,ENSG00000135299:ENST00000369408:exon15:c.G1632A:p.S544S,ENSG00000135299:ENST00000339746:exon16:c.G1737A:p.S579S,ENSG00000135299:ENST00000447838:exon16:c.G1722A:p.S574S,ENSG00000135299:ENST00000522441:exon16:c.G1737A:p.S579S	Score=397;Name=lod=55	NA	6q15	NA	NA	NA	NA	rs3210511	0.65	0.65	0.637	0.600839	0.4662	0.9077	0.7003	0.5749	0.3875	0.48	0.91	0.67	0.61	0.5286	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.818124	NA	NA	0.476064	0.594643	NA	0.254	NA	5.1958026
1132	4	8229774	8229774	C	T	exonic	SH3TC1	NA	nonsynonymous SNV	SH3TC1:NM_018986:exon12:c.C2353T:p.R785C	exonic	ENSG00000125089	NA	nonsynonymous SNV	ENSG00000125089:ENST00000245105:exon12:c.C2353T:p.R785C,ENSG00000125089:ENST00000539824:exon12:c.C2125T:p.R709C	NA	NA	4p16.1	NA	NA	NA	NA	rs1281149	0.51	0.51	0.497	0.475639	0.7306	0.5129	0.5274	0.1286	0.6074	0.73	0.48	0.6	0.14	0.6396	0.77	0.28	T	0.017	B	0.008	B	0.017	N	1.000	P	0.95	L	-0.87	T	-0.974	T	0.000	T	0.18	-0.838	0.578	1.91	0.684	0.549	2.848	-0.838249	NA	0.08	0.767388	0.240127	NA	0.514	NA	5.1957454
1133	10	72289701	72289701	G	A	exonic	PALD1	NA	synonymous SNV	PALD1:NM_014431:exon4:c.G345A:p.V115V	exonic	ENSG00000107719	NA	synonymous SNV	ENSG00000107719:ENST00000263563:exon4:c.G345A:p.V115V	NA	NA	10q22.1	NA	NA	NA	NA	rs2275059	0.21	0.21	0.177	0.218051	0.1491	0.503	0.2046	0.0166	0.2771	0.14	0.46	0.21	0.02	0.1806	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.72456	NA	NA	0.142209	0.041988	NA	0.174	NA	5.1947576
1133	19	38861333	38861333	G	A	exonic	CATSPERG	NA	synonymous SNV	CATSPERG:NM_021185:exon29:c.G3381A:p.P1127P	exonic	ENSG00000099338	NA	synonymous SNV	ENSG00000099338:ENST00000410018:exon28:c.G3261A:p.P1087P,ENSG00000099338:ENST00000409235:exon29:c.G3381A:p.P1127P	NA	NA	19q13.2	NA	NA	Name=5	NA	rs1052375	0.31	0.31	0.303	0.269768	0.5249	0.2262	0.3228	0.0363	0.3303	0.52	0.22	0.35	0.05	0.4188	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.297099	NA	NA	0.528488	0.119156	NA	0.42	NA	5.1944786
1133	3	44622115	44622115	T	C	intronic	ZKSCAN7	NA	NA	NA	ncRNA_exonic	ENSG00000214820	NA	NA	NA	Score=676;Name=lod=742	NA	3p21.31	NA	NA	NA	NA	rs113958788	0.08	0.08	0.062	0.0589058	0.1402	0.0427	0.0807	0.0121	0.0399	0.15	0.03	0.1	0.01	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.073241	NA	NA	NA	NA	NA	0.181	NA	5.1931333
1133	2	211168346	211168346	A	C	intronic	MYL1	NA	NA	NA	UTR5	ENSG00000168530	ENST00000341685:c.-78T>G	NA	NA	Score=435;Name=lod=78	NA	2q34	NA	NA	Name=3	NA	rs12469767	0.53	0.53	0.496	0.541733	0.494	0.4692	0.5879	0.618	0.5297	0.5	0.46	0.54	0.64	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.065967	NA	NA	0.479887	0.571532	NA	0.5	NA	5.1927797
1133	11	47500400	47500400	C	T	intronic	CELF1	NA	NA	NA	intronic	ENSG00000149187	NA	NA	NA	Score=295;Name=lod=21	NA	11p11.2	NA	NA	Name=6	NA	rs12224672	0.19	0.19	0.187	0.19369	0.2535	0.3264	0.1744	0.0121	0.2546	0.25	0.26	0.19	0.02	0.2713	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.647697	4.647697	NA	0.282457	0.057701	NA	0.225	NA	5.192743
1133	10	38475621	38475621	G	A	ncRNA_intronic	LOC100129055	NA	NA	NA	ncRNA_exonic	ENSG00000236309	NA	NA	NA	Score=584;Name=lod=314	NA	10p11.1	NA	NA	NA	NA	rs2077456	0.5	0.5	0.491	0.465256	0.4742	0.5665	0.5072	0.4909	0.2873	0.48	0.54	0.5	0.46	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.599217	NA	NA	NA	NA	NA	0.507	NA	5.1924666
1133	16	17202801	17202801	G	A	exonic	XYLT1	NA	synonymous SNV	XYLT1:NM_022166:exon12:c.C2631T:p.P877P	exonic	ENSG00000103489	NA	synonymous SNV	ENSG00000103489:ENST00000261381:exon12:c.C2631T:p.P877P	NA	NA	16p12.3	NA	NA	NA	NA	rs34511974	0.09	0.09	0.074	0.102636	0.1491	0.002	0.2478	0.0045	0.1881	0.15	0.0035	0.26	0.0041	0.1691	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.597514	NA	NA	0.156047	0.035048	ID=COSM1376157;OCCURENCE=1(large_intestine)	0.065	NA	5.1924196
1133	7	98596408	98596408	G	A	intronic	TRRAP	NA	NA	NA	ncRNA_exonic	ENSG00000238109	NA	NA	NA	Score=538;Name=lod=205	NA	7q22.1	NA	NA	NA	NA	rs219831	0.32	0.32	0.338	0.323682	0.1412	0.2123	0.2349	0.7663	0.091	0.14	0.24	0.25	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.165945	NA	NA	NA	NA	NA	0.333	NA	5.1921333
1133	13	114175004	114175004	C	T	exonic	TMCO3	NA	synonymous SNV	TMCO3:NM_017905:exon8:c.C1299T:p.A433A	exonic	ENSG00000150403	NA	synonymous SNV	ENSG00000150403:ENST00000434316:exon8:c.C1299T:p.A433A	NA	NA	13q34	NA	NA	NA	NA	rs2260334	0.24	0.24	0.254	0.244209	0.1571	0.2728	0.1499	0.4213	0.1319	0.15	0.26	0.15	0.41	0.1704	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.143678	NA	NA	0.147209	0.353836	NA	0.217	NA	5.1919576
1133	1	152281008	152281008	A	G	exonic	FLG	NA	synonymous SNV	FLG:NM_002016:exon3:c.T6354C:p.H2118H	exonic	ENSG00000143631	NA	synonymous SNV	ENSG00000143631:ENST00000368799:exon3:c.T6354C:p.H2118H	NA	NA	1q21.3	NA	NA	NA	NA	rs7512554	NA	NA	0.209	0.327676	0.1282	0.4355	0.3357	0.3843	0.3395	NA	NA	NA	NA	0.2207	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.320816	NA	NA	0.12593	0.328189	NA	NA	NA	5.1918366
1133	15	76067771	76067771	A	C	intergenic	MIR4313,UBE2Q2	dist=13115;dist=67851	NA	NA	upstream	ENSG00000187812	NA	NA	NA	NA	NA	15q24.2	NA	Name=TCF4,TBP,IRF1	Name=19	NA	rs34951369	0.32	0.32	0.279	0.315695	0.3082	0.3026	0.3862	0.3343	0.2618	0.32	0.28	0.36	0.32	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.409428	NA	NA	NA	NA	NA	0.283	NA	5.1918
1133	11	75152243	75152243	C	T	exonic	GDPD5	NA	nonsynonymous SNV	GDPD5:NM_030792:exon14:c.G1438A:p.A480T	exonic	ENSG00000158555	NA	nonsynonymous SNV	ENSG00000158555:ENST00000534322:exon2:c.G190A:p.A64T,ENSG00000158555:ENST00000533784:exon9:c.G1081A:p.A361T,ENSG00000158555:ENST00000533805:exon9:c.G703A:p.A235T,ENSG00000158555:ENST00000376282:exon10:c.G1081A:p.A361T,ENSG00000158555:ENST00000526177:exon10:c.G1024A:p.A342T,ENSG00000158555:ENST00000336898:exon14:c.G1438A:p.A480T,ENSG00000158555:ENST00000529721:exon15:c.G1438A:p.A480T	NA	NA	11q13.4	NA	NA	NA	NA	rs571353	0.71	0.71	0.684	0.667133	0.7147	0.9236	0.719	0.4569	0.6012	0.71	0.92	0.71	0.44	0.6969	0.92	0.52	T	0.0	B	0.001	B	0.915	N	1.000	P	-1.04	N	0.87	T	-1.000	T	0.000	T	0.317	0.507	6.751	-0.093	-0.362	-0.306	10.374	0.507351	NA	0.55	0.730026	0.510455	ID=COSM330244;OCCURENCE=1(breast),1(haematopoietic_and_lymphoid_tissue)	0.594	NA	5.1917074
1133	1	11852300	11852300	C	T	intronic	MTHFR	NA	NA	NA	intronic	ENSG00000177000	NA	NA	NA	NA	NA	1p36.22	NA	Name=CEBPB	Name=11	NA	rs1476413	0.22	0.22	0.22	0.251198	0.2803	0.2351	0.1398	0.1452	0.4601	0.29	0.21	0.17	0.15	0.2677	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.940787	1.940787	NA	0.260698	0.149115	NA	0.21	NA	5.191302
1133	3	44619893	44619893	C	T	intronic	ZKSCAN7	NA	NA	NA	ncRNA_intronic	ENSG00000236869	NA	NA	NA	Score=637;Name=lod=517	NA	3p21.31	NA	NA	NA	NA	rs7650486	0.11	0.11	0.109	0.0874601	0.1431	0.0427	0.1009	0.1067	0.0409	0.16	0.03	0.12	0.13	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.230003	NA	NA	NA	NA	NA	0.181	NA	5.1902333
1133	3	44620008	44620008	G	A	intronic	ZKSCAN7	NA	NA	NA	ncRNA_intronic	ENSG00000236869	NA	NA	NA	Score=637;Name=lod=517	NA	3p21.31	NA	NA	NA	NA	rs7627777	0.11	0.11	0.115	0.0864617	0.1431	0.0437	0.1009	0.1021	0.0409	0.16	0.03	0.12	0.12	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.426969	NA	NA	NA	NA	NA	0.203	NA	5.1902333
1133	3	44620855	44620855	C	T	intronic	ZKSCAN7	NA	NA	NA	ncRNA_intronic	ENSG00000236869	NA	NA	NA	Score=504;Name=lod=149	NA	3p21.31	NA	NA	NA	NA	rs111593586	0.13	0.13	0.144	0.10603	0.1431	0.0427	0.1009	0.177	0.0409	0.16	0.03	0.12	0.19	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.18928	NA	NA	NA	NA	NA	0.188	NA	5.1902333
1133	16	10206175	10206175	T	C	intronic	GRIN2A	NA	NA	NA	ncRNA_exonic	ENSG00000261647	NA	NA	NA	Score=809;Name=lod=2586	NA	16p13.2	NA	NA	NA	NA	rs11866570	0.1	0.1	0.094	0.0874601	0.1431	0.003	0.085	0.1687	0.0092	0.13	0.0035	0.1	0.17	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.677397	NA	NA	NA	NA	NA	0.08	NA	5.1902333
1133	11	116633825	116633825	C	T	exonic	BUD13	NA	synonymous SNV	BUD13:NM_001159736:exon4:c.G480A:p.P160P,BUD13:NM_032725:exon4:c.G480A:p.P160P	exonic	ENSG00000137656	NA	synonymous SNV	ENSG00000137656:ENST00000260210:exon4:c.G480A:p.P160P,ENSG00000137656:ENST00000375445:exon4:c.G480A:p.P160P	Score=340;Name=lod=32	NA	11q23.3	NA	NA	NA	NA	rs918144	0.51	0.51	0.488	0.545128	0.4821	0.381	0.6023	0.6785	0.5583	0.46	0.42	0.59	0.65	0.5179	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.9382	NA	NA	0.47649	0.621536	NA	0.471	NA	5.1901766
1133	6	159166486	159166486	A	G	intronic	SYTL3	NA	NA	NA	intronic	ENSG00000164674	NA	NA	NA	NA	NA	6q25.3	Score=844;Name=V$EVI1_04	Name=KAP1	NA	NA	rs6914168	0.25	0.25	0.234	0.27496	0.2505	0.1121	0.1628	0.4486	0.3129	0.25	0.09	0.21	0.47	0.3061	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.790186	NA	NA	0.253547	0.413527	NA	0.246	NA	5.189853
1133	17	39122797	39122797	G	A	exonic	KRT39	NA	synonymous SNV	KRT39:NM_213656:exon1:c.C312T:p.N104N	exonic	ENSG00000196859	NA	synonymous SNV	ENSG00000196859:ENST00000355612:exon1:c.C312T:p.N104N,ENSG00000196859:ENST00000578078:exon1:c.C312T:p.N104N	NA	NA	17q21.2	NA	NA	NA	NA	rs10491137	0.15	0.15	0.157	0.167332	0.159	0.0327	0.1628	0.2466	0.2106	0.16	0.04	0.15	0.25	0.1601	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.50597	NA	NA	0.157821	0.221289	NA	0.203	NA	5.1897456
1133	18	56358011	56358011	G	A	intronic	MALT1	NA	NA	NA	ncRNA_exonic	ENSG00000266946	NA	NA	NA	Score=333;Name=lod=30	NA	18q21.32	NA	NA	NA	NA	rs56709204	0.15	0.15	0.147	0.155751	0.1441	0.0179	0.1916	0.3139	0.0706	0.15	0.02	0.19	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.005183	NA	NA	NA	NA	NA	0.159	NA	5.1892333
1133	6	4715980	4715980	C	A	intergenic	ECI2,CDYL	dist=580149;dist=60700	NA	NA	UTR5	ENSG00000153046	ENST00000328908:c.-33C>A	NA	NA	Score=389;Name=lod=51	NA	6p25.1	NA	NA	Name=5	NA	rs3812180	0.25	0.25	0.239	0.223043	0.2247	0.2679	0.3199	0.2685	0.045	0.22	0.24	0.28	0.27	0.2095	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.382372	1.382372	NA	0.210116	0.257376	ID=COSN167678;OCCURENCE=1(large_intestine)	0.29	NA	5.1890174
1133	19	51918112	51918112	A	G	exonic	SIGLEC10	NA	synonymous SNV	SIGLEC10:NM_001171156:exon8:c.T1407C:p.H469H,SIGLEC10:NM_033130:exon8:c.T1581C:p.H527H	exonic	ENSG00000142512	NA	synonymous SNV	ENSG00000142512:ENST00000339313:exon8:c.T1581C:p.H527H,ENSG00000142512:ENST00000356298:exon8:c.T1581C:p.H527H,ENSG00000142512:ENST00000439889:exon8:c.T1407C:p.H469H	NA	NA	19q13.41	NA	NA	NA	NA	rs3810099	0.21	0.21	0.22	0.243211	0.1501	0.2113	0.1974	0.3835	0.2147	0.15	0.19	0.18	0.36	0.1783	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.082598	NA	NA	0.150116	0.344076	NA	0.232	NA	5.1881506
1133	4	189012728	189012728	G	C	exonic	TRIML2	NA	synonymous SNV	TRIML2:NM_173553:exon7:c.C963G:p.G321G	exonic	ENSG00000179046	NA	synonymous SNV	ENSG00000179046:ENST00000512729:exon7:c.C963G:p.G321G,ENSG00000179046:ENST00000326754:exon8:c.C1038G:p.G346G	NA	NA	4q35.2	Score=780;Name=V$PAX2_01	NA	NA	NA	rs2279550	0.67	0.67	0.687	0.71246	0.4642	0.9117	0.5663	0.8177	0.7239	0.45	0.9	0.56	0.8	0.5575	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.090699	NA	NA	0.457326	0.762823	NA	0.572	NA	5.1876406
1133	12	26784850	26784850	G	A	exonic	ITPR2	NA	synonymous SNV	ITPR2:NM_002223:exon22:c.C2883T:p.H961H	exonic	ENSG00000123104	NA	synonymous SNV	ENSG00000123104:ENST00000381340:exon22:c.C2883T:p.H961H	NA	NA	12p11.23	NA	Name=GATA-2	NA	NA	rs2230372	0.46	0.46	0.457	0.492812	0.497	0.3839	0.3285	0.5393	0.6544	0.49	0.37	0.37	0.58	0.4856	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.06393	NA	NA	0.496679	0.571394	NA	0.543	NA	5.1873876
1133	8	6331612	6331612	G	A	intronic	MCPH1	NA	NA	NA	ncRNA_exonic	ENSG00000253550	NA	NA	NA	Score=622;Name=lod=450	NA	8p23.1	NA	NA	NA	NA	rs60915478	0.16	0.16	0.165	0.173722	0.1461	0.1806	0.1124	0.2088	0.1912	0.14	0.17	0.1	0.21	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.19757	NA	NA	NA	NA	NA	0.304	NA	5.1872333
1133	3	196674879	196674879	A	G	exonic	PIGZ	NA	synonymous SNV	PIGZ:NM_025163:exon3:c.T889C:p.L297L	exonic	ENSG00000119227	NA	synonymous SNV	ENSG00000119227:ENST00000412723:exon3:c.T889C:p.L297L	Score=464;Name=lod=103	NA	3q29	NA	NA	NA	NA	rs12636891	0.6	0.6	0.605	0.592452	0.4881	0.755	0.6095	0.6036	0.5051	0.5	0.78	0.55	0.61	0.5381	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.738041	NA	NA	0.453605	0.567408	NA	0.565	NA	5.1868616
1133	12	104100617	104100617	C	T	exonic	STAB2	NA	synonymous SNV	STAB2:NM_017564:exon38:c.C4044T:p.C1348C	exonic	ENSG00000136011	NA	synonymous SNV	ENSG00000136011:ENST00000388887:exon38:c.C4044T:p.C1348C	Score=426;Name=lod=72	NA	12q23.3	NA	NA	NA	NA	rs697212	0.45	0.45	0.437	0.430911	0.504	0.747	0.3256	0.1203	0.5245	0.51	0.7	0.36	0.12	0.4835	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.636914	NA	NA	0.492326	0.195642	NA	0.304	NA	5.1868406
1133	5	140581510	140581510	G	T	exonic	PCDHB11	NA	synonymous SNV	PCDHB11:NM_018931:exon1:c.G2163T:p.S721S	exonic	ENSG00000197479	NA	synonymous SNV	ENSG00000197479:ENST00000354757:exon1:c.G2163T:p.S721S,ENSG00000197479:ENST00000536699:exon2:c.G1068T:p.S356S	NA	NA	5q31.3	NA	NA	NA	NA	rs638054	0.26	0.26	0.237	NA	NA	NA	NA	NA	NA	0.22	0.52	0.24	0.02	0.2584	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.638589	NA	NA	0.221512	0.041761	NA	0.261	NA	5.1867546
1133	17	74383475	74383475	T	C	exonic	SPHK1	NA	synonymous SNV	SPHK1:NM_001142602:exon5:c.T963C:p.Y321Y,SPHK1:NM_001142601:exon6:c.T963C:p.Y321Y,SPHK1:NM_021972:exon6:c.T1005C:p.Y335Y,SPHK1:NM_182965:exon6:c.T1221C:p.Y407Y	exonic	ENSG00000176170	NA	synonymous SNV	ENSG00000176170:ENST00000392496:exon5:c.T963C:p.Y321Y,ENSG00000176170:ENST00000323374:exon6:c.T1221C:p.Y407Y,ENSG00000176170:ENST00000590959:exon6:c.T1005C:p.Y335Y,ENSG00000176170:ENST00000592299:exon6:c.T963C:p.Y321Y,ENSG00000176170:ENST00000545180:exon8:c.T963C:p.Y321Y	NA	NA	17q25.1	NA	NA	NA	NA	rs3744037	0.24	0.24	0.23	0.214257	0.1392	0.4028	0.1715	0.2057	0.1391	0.14	0.42	0.17	0.22	0.1763	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.238106	NA	NA	0.164651	0.21153	NA	0.254	NA	5.1865156
1133	2	133539566	133539566	G	A	exonic	NCKAP5	NA	synonymous SNV	NCKAP5:NM_207363:exon14:c.C4818T:p.H1606H	exonic	ENSG00000176771	NA	synonymous SNV	ENSG00000176771:ENST00000317721:exon12:c.C4818T:p.H1606H,ENSG00000176771:ENST00000409261:exon14:c.C4818T:p.H1606H	Score=284;Name=lod=19	NA	2q21.2	NA	NA	NA	NA	rs6730282	0.56	0.56	0.567	0.535942	0.4702	0.745	0.4813	0.4985	0.4775	0.47	0.78	0.48	0.49	0.5073	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.019871	NA	NA	0.503386	0.525521	NA	0.638	NA	5.1857806
1133	5	76586373	76586373	G	A	intronic	PDE8B	NA	NA	NA	ncRNA_exonic	ENSG00000251400	NA	NA	NA	Score=812;Name=lod=2659	NA	5q13.3	NA	NA	NA	NA	rs3797461	0.17	0.17	0.16	0.149361	0.1481	0.3274	0.1326	0.0749	0.0798	0.15	0.31	0.16	0.08	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.444118	NA	NA	NA	NA	NA	0.08	NA	5.1852333
1133	2	98986510	98986510	T	C	exonic	CNGA3	NA	synonymous SNV	CNGA3:NM_001079878:exon2:c.T72C:p.D24D,CNGA3:NM_001298:exon2:c.T72C:p.D24D	exonic	ENSG00000144191	NA	synonymous SNV	ENSG00000144191:ENST00000272602:exon1:c.T72C:p.D24D,ENSG00000144191:ENST00000393504:exon2:c.T72C:p.D24D,ENSG00000144191:ENST00000436404:exon2:c.T72C:p.D24D	NA	NA	2q11.2	NA	NA	NA	NA	rs6727412	0.1	0.1	0.099	0.0898562	0.166	0.0099	0.1282	0.084	0.0746	0.16	0.0017	0.11	0.1	0.1386	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.152465	NA	NA	0.176977	0.108488	NA	0.109	NA	5.1850896
1134	19	16976289	16976289	T	C	exonic	SIN3B	NA	synonymous SNV	SIN3B:NM_015260:exon12:c.T1548C:p.S516S	exonic	ENSG00000127511	NA	synonymous SNV	ENSG00000127511:ENST00000595541:exon2:c.T222C:p.S74S,ENSG00000127511:ENST00000248054:exon11:c.T1452C:p.S484S,ENSG00000127511:ENST00000379803:exon12:c.T1548C:p.S516S	NA	NA	19p13.11	NA	NA	NA	NA	rs2303091	0.17	0.17	0.137	0.158147	0.162	0.2778	0.2104	0.0204	0.18	0.15	0.27	0.22	0.03	0.1625	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.132363	NA	NA	0.157558	0.041307	NA	0.123	NA	5.1846086
1134	4	166326596	166326596	C	T	intronic	CPE	NA	NA	NA	ncRNA_exonic	ENSG00000251596	NA	NA	NA	Score=519;Name=lod=172	NA	4q32.3	NA	NA	NA	NA	rs77038092	0.13	0.13	0.119	0.113618	0.1491	0.1478	0.1326	0.0514	0.1125	0.14	0.15	0.16	0.05	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.886351	NA	NA	NA	NA	NA	0.087	NA	5.1842333
1134	20	34132256	34132256	C	T	intronic	ERGIC3	NA	NA	NA	ncRNA_exonic	ENSG00000224497	NA	NA	NA	Score=655;Name=lod=615	NA	20q11.22	NA	NA	NA	NA	rs11700250	0.16	0.16	0.159	0.203874	0.1491	0.1399	0.1614	0.2436	0.3027	0.13	0.13	0.18	0.23	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.428176	NA	NA	NA	NA	NA	0.13	NA	5.1842333
1134	13	50057097	50057097	G	A	exonic	SETDB2	NA	nonsynonymous SNV	SETDB2:NM_001160308:exon8:c.G1381A:p.V461M,SETDB2:NM_031915:exon10:c.G1417A:p.V473M	exonic	ENSG00000136169	NA	nonsynonymous SNV	ENSG00000136169:ENST00000258672:exon9:c.G1381A:p.V461M,ENSG00000136169:ENST00000354234:exon9:c.G1381A:p.V461M,ENSG00000136169:ENST00000317257:exon10:c.G1417A:p.V473M	NA	NA	13q14.2	NA	NA	NA	NA	rs2057413	0.82	0.82	0.807	0.820687	0.6909	0.873	0.7839	0.9675	0.728	0.7	0.87	0.8	0.95	0.7572	0.95	0.12	T	0.001	B	0.004	B	0.812	N	1.000	P	0.55	N	1.13	T	-0.957	T	0.000	T	0.033	-0.281	2.655	-0.814	-0.236	-0.045	5.811	-0.281056	NA	0.16	0.701744	0.932592	NA	0.804	NA	5.1834894
1134	1	186274133	186274133	C	T	ncRNA_intronic	MIR548F1,RNU6-72P	NA	NA	NA	intronic	ENSG00000116690	NA	NA	NA	NA	NA	1q31.1	NA	Name=CTCF_(SC-5916),CTCF	NA	NA	rs6425024	0.16	0.16	0.165	0.175919	0.1501	0.1339	0.0879	0.3041	0.135	0.15	0.12	0.1	0.26	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.31203	NA	NA	NA	NA	NA	0.188	NA	5.1832333
1134	3	159713078	159713078	A	C	intronic	IL12A	NA	NA	NA	ncRNA_intronic	ENSG00000244040	NA	NA	NA	NA	NA	3q25.33	NA	NA	NA	NA	NA	NA	NA	NA	0.0485224	0.1501	0.001	0.0865	0.0083	0.0204	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.590122	NA	NA	NA	NA	NA	NA	NA	5.1832333
1134	12	27064232	27064232	C	T	exonic	ASUN	NA	synonymous SNV	ASUN:NM_018164:exon15:c.G1824A:p.E608E	exonic	ENSG00000064102	NA	synonymous SNV	ENSG00000064102:ENST00000538155:exon6:c.G765A:p.E255E,ENSG00000064102:ENST00000539625:exon13:c.G1521A:p.E507E,ENSG00000064102:ENST00000261191:exon15:c.G1824A:p.E608E	Score=508;Name=lod=155	NA	12p11.23	NA	NA	NA	NA	rs3210635	0.57	0.57	0.551	0.579273	0.492	0.7609	0.4366	0.5514	0.6207	0.49	0.78	0.44	0.54	0.5184	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.636272	NA	NA	0.473366	0.514526	NA	0.522	NA	5.1829006
1134	5	112899573	112899573	T	C	exonic	YTHDC2	NA	synonymous SNV	YTHDC2:NM_022828:exon20:c.T2460C:p.D820D	exonic	ENSG00000047188	NA	synonymous SNV	ENSG00000047188:ENST00000161863:exon20:c.T2460C:p.D820D	NA	NA	5q22.2	NA	NA	NA	NA	rs6867579	0.11	0.11	0.111	0.0936502	0.1759	0.0794	0.0908	0.025	0.1186	0.19	0.07	0.11	0.02	0.1363	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.661262	NA	NA	0.171628	0.049273	NA	0.058	NA	5.1828386
1134	14	58471349	58471349	G	A	UTR3	C14orf37	NM_001001872:c.*105C>T	NA	NA	UTR3	ENSG00000139971	ENST00000267485:c.*105C>T	NA	NA	NA	NA	14q23.1	Score=852;Name=V$GATA1_03	NA	NA	NA	rs17807721	0.09	0.09	0.071	0.0830671	0.1511	0.0476	0.1282	0.0174	0.1063	0.14	0.05	0.14	0.01	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.370706	NA	NA	NA	NA	NA	0.043	NA	5.1822334
1134	1	168698173	168698173	C	T	exonic	DPT	NA	synonymous SNV	DPT:NM_001937:exon1:c.G240A:p.T80T	exonic	ENSG00000143196	NA	synonymous SNV	ENSG00000143196:ENST00000367817:exon1:c.G240A:p.T80T	NA	NA	1q24.2	Score=827;Name=V$EGR2_01	NA	NA	NA	rs1052591	0.33	0.33	0.33	0.317492	0.5129	0.1637	0.3141	0.2519	0.3661	0.5	0.16	0.31	0.26	0.4302	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.921087	NA	NA	0.541628	0.326373	ID=COSM1560468;OCCURENCE=1(large_intestine)	0.384	NA	5.1819386
1134	15	101094335	101094335	C	G	ncRNA_exonic	PRKXP1	NA	NA	NA	ncRNA_exonic	ENSG00000259205	NA	NA	NA	Score=686;Name=lod=817	NA	15q26.3	NA	NA	NA	NA	rs28628432	0.33	0.33	0.34	0.307708	0.4851	0.244	0.2608	0.1959	0.3753	0.5	0.25	0.3	0.2	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.146297	NA	NA	NA	NA	ID=COSN165069;OCCURENCE=1(breast),1(NS)	0.355	NA	5.1815666
1134	6	17834198	17834198	T	G	exonic	KIF13A	NA	synonymous SNV	KIF13A:NM_001105566:exon12:c.A1260C:p.I420I,KIF13A:NM_001105567:exon12:c.A1260C:p.I420I,KIF13A:NM_001105568:exon12:c.A1260C:p.I420I,KIF13A:NM_022113:exon12:c.A1260C:p.I420I	exonic	ENSG00000137177	NA	synonymous SNV	ENSG00000137177:ENST00000259711:exon12:c.A1260C:p.I420I,ENSG00000137177:ENST00000378814:exon12:c.A1260C:p.I420I,ENSG00000137177:ENST00000378816:exon12:c.A1260C:p.I420I,ENSG00000137177:ENST00000378826:exon12:c.A1260C:p.I420I,ENSG00000137177:ENST00000378843:exon12:c.A1260C:p.I420I	Score=585;Name=lod=317	NA	6p22.3	NA	NA	NA	NA	rs4716189	0.42	0.42	0.368	0.436701	0.496	0.4018	0.5144	0.2988	0.5429	0.49	0.4	0.48	0.31	0.5069	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.197607	NA	NA	0.482544	0.336048	NA	0.529	NA	5.1812226
1134	9	125316033	125316033	T	C	exonic	OR1N2	NA	synonymous SNV	OR1N2:NM_001004457:exon1:c.T585C:p.Y195Y	exonic	ENSG00000171501	NA	synonymous SNV	ENSG00000171501:ENST00000373688:exon1:c.T585C:p.Y195Y	Score=361;Name=lod=39	NA	9q33.2	NA	NA	NA	NA	rs1341042	0.55	0.55	0.509	0.558906	0.4791	0.6637	0.5908	0.5961	0.4601	0.47	0.62	0.58	0.57	0.517	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.66066	NA	NA	0.489651	0.574217	NA	0.428	NA	5.1809156
1134	19	42315300	42315300	G	T	UTR3	CEACAM3	NM_001815:c.*25G>T,NM_001277163:c.*40G>T	NA	NA	UTR3	ENSG00000170956	ENST00000357396:c.*25G>T,ENST00000221999:c.*92G>T,ENST00000415495:c.*754G>T,ENST00000344550:c.*40G>T	NA	NA	NA	NA	19q13.2	NA	Name=PU.1,NFKB	Name=9	NA	rs2008808	0.5	0.5	0.509	0.519169	0.3748	0.5357	0.4841	0.7526	0.3599	0.37	0.55	0.42	0.7	0.4074	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.223734	NA	NA	0.370453	0.646059	NA	0.536	NA	5.1806804
1134	2	170032989	170032989	C	T	exonic	LRP2	NA	synonymous SNV	LRP2:NM_004525:exon54:c.G10503A:p.Q3501Q	exonic	ENSG00000081479	NA	synonymous SNV	ENSG00000081479:ENST00000263816:exon54:c.G10503A:p.Q3501Q	NA	NA	2q31.1	NA	NA	NA	NA	rs2229265	0.37	0.37	0.346	0.379593	0.496	0.1062	0.6268	0.2995	0.4744	0.49	0.11	0.62	0.31	0.4725	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.015484	NA	NA	0.517558	0.322288	NA	0.413	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117498.2;CLNDSDB=.;CLNDSDBID=.	5.1806086
1134	21	47545823	47545823	G	A	exonic	COL6A2	NA	synonymous SNV	COL6A2:NM_001849:exon26:c.G2094A:p.A698A,COL6A2:NM_058174:exon26:c.G2094A:p.A698A,COL6A2:NM_058175:exon26:c.G2094A:p.A698A	exonic	ENSG00000142173	NA	synonymous SNV	ENSG00000142173:ENST00000397763:exon25:c.G2094A:p.A698A,ENSG00000142173:ENST00000409416:exon25:c.G2094A:p.A698A,ENSG00000142173:ENST00000300527:exon26:c.G2094A:p.A698A,ENSG00000142173:ENST00000310645:exon26:c.G2094A:p.A698A,ENSG00000142173:ENST00000357838:exon26:c.G2094A:p.A698A	NA	NA	21q22.3	NA	NA	NA	NA	rs13052956	0.44	0.44	0.42	0.394169	0.5109	0.4306	0.6398	0.208	0.3139	0.53	0.41	0.62	0.22	0.4755	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.610217	NA	NA	0.500349	0.241716	NA	0.29	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000079869.2;CLNDSDB=.;CLNDSDBID=.	5.1799176
1134	5	87677848	87677848	C	T	ncRNA_intronic	TMEM161B-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000240083	NA	NA	NA	Score=787;Name=lod=2101	NA	5q14.3	NA	NA	NA	NA	rs4916720	0.58	0.58	0.6	0.614816	0.4871	0.3889	0.5389	0.9539	0.5746	0.49	0.4	0.57	0.94	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.254071	NA	NA	NA	NA	NA	0.601	NA	5.1795666
1134	10	5203864	5203864	C	T	ncRNA_exonic	AKR1CL1	NA	NA	NA	exonic	ENSG00000196326	NA	synonymous SNV	ENSG00000196326:ENST00000334314:exon3:c.G333A:p.P111P,ENSG00000196326:ENST00000488756:exon3:c.G333A:p.P111P	Score=346;Name=lod=34	NA	10p15.1	NA	NA	NA	NA	rs11253021	0.21	0.21	0.21	0.18131	0.3588	NA	0.183	0.2057	0.1513	0.35	NA	0.22	0.22	0.2749	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.126783	NA	NA	0.353605	0.231049	NA	0.145	NA	5.1793616
1134	9	125391369	125391369	A	G	exonic	OR1B1	NA	nonsynonymous SNV	OR1B1:NM_001004450:exon1:c.T446C:p.L149S	exonic	ENSG00000171484	NA	nonsynonymous SNV	ENSG00000171484:ENST00000304833:exon1:c.T446C:p.L149S	NA	NA	9q33.2	NA	NA	NA	NA	rs1536929	0.63	0.63	0.643	0.641374	0.7207	0.6409	0.5965	0.4357	0.8701	0.73	0.69	0.6	0.43	0.7012	0.73	0.08	T	0.001	B	0.006	B	0.263	N	1.000	P	0.595	N	1.07	T	-1.007	T	0.000	T	0.081	-1.476	0.018	1.96	0.787	0.040	6.862	-1.475677	NA	0.53	0.732558	0.508171	NA	0.761	NA	5.1788754
1134	1	248366792	248366792	T	C	exonic	OR2M3	NA	synonymous SNV	OR2M3:NM_001004689:exon1:c.T423C:p.C141C	exonic	ENSG00000228198	NA	synonymous SNV	ENSG00000228198:ENST00000456743:exon1:c.T423C:p.C141C	NA	NA	1q44	NA	NA	NA	NA	rs12562957	0.22	0.22	0.219	0.246006	0.1451	0.3542	0.255	0.171	0.3333	0.16	0.35	0.21	0.18	0.1966	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.234462	NA	NA	0.146279	0.156151	NA	0.188	NA	5.1786876
1134	20	56136536	56136536	A	G	exonic	PCK1	NA	synonymous SNV	PCK1:NM_002591:exon2:c.A69G:p.L23L	exonic	ENSG00000124253	NA	synonymous SNV	ENSG00000124253:ENST00000319441:exon2:c.A69G:p.L23L	Score=361;Name=lod=39	NA	20q13.31	NA	NA	NA	NA	rs1042521	0.42	0.42	0.406	0.396965	0.5278	0.377	0.3761	0.3064	0.4202	0.53	0.38	0.41	0.3	0.4539	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.178716	NA	NA	0.506395	0.333863	NA	0.486	NA	5.1785716
1134	6	29856347	29856347	C	T	ncRNA_exonic	HLA-H	NA	NA	NA	ncRNA_exonic	ENSG00000206341	NA	NA	NA	NA	NA	6p22.1	NA	Name=ZEB1_(SC-25388)	Name=64	NA	rs3128875	0.73	0.73	0.75	0.757388	0.7376	0.6915	0.7954	0.8268	0.7249	0.72	0.67	0.75	0.82	0.7507	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.427751	NA	NA	NA	NA	NA	0.536	NA	5.1783666
1134	5	147012186	147012186	C	T	ncRNA_intronic	JAKMIP2-AS1	NA	NA	NA	intronic	ENSG00000176049	NA	NA	NA	NA	NA	5q32	NA	NA	Name=2	NA	rs3763093	0.13	0.13	0.111	0.156749	0.1551	0.2063	0.2205	0.0219	0.2444	0.14	0.19	0.18	0.02	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.249871	NA	NA	NA	NA	NA	0.159	NA	5.1782333
1134	9	100849682	100849682	T	G	UTR3	TRIM14	NM_014788:c.*70A>C	NA	NA	UTR3	ENSG00000106785	ENST00000341469:c.*70A>C,ENST00000538344:c.*70A>C	NA	NA	NA	NA	9q22.33	NA	Name=CTCF	NA	NA	rs78845704	0.11	0.11	0.079	0.0858626	0.0815	0.251	0.0533	0.0015	0.0573	0.09	0.26	0.07	0.002	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.406431	NA	NA	0.073853	0.018786	NA	0.029	NA	5.1779804
1134	1	192778159	192778159	A	T	upstream	RGS2	NA	NA	NA	upstream	ENSG00000116741	NA	NA	NA	NA	NA	1q31.2	NA	Name=TBP,GTF2F1_(RAP-74),IRF1,GTF2B,Oct-2,SRF,CCNT2,Max,NFKB,HEY1,Rad21,TAF7_(SQ-8),Sin3Ak-20,Pol2-4H8,USF1_(SC-8983),SP1,NRSF,Pol2,Pol2(phosphoS2),Ini1,POU2F2,HMGN3,TAL1_(SC-12984),E2F6_(H-50),ETS1,JunD,Pol2(b),TAF1,CTCFL_(SC-98982)	Name=148	NA	rs12130714	0.1	0.1	0.092	0.0826677	0.1809	0.0575	0.1196	0.0197	0.0665	0.16	0.05	0.14	0.01	0.1228	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.222683	NA	NA	0.185116	0.04108	NA	0.13	NA	5.1778506
1134	8	23291835	23291835	T	C	exonic	ENTPD4	NA	synonymous SNV	ENTPD4:NM_001128930:exon12:c.A1593G:p.P531P,ENTPD4:NM_004901:exon12:c.A1617G:p.P539P	exonic	ENSG00000197217	NA	synonymous SNV	ENSG00000197217:ENST00000518471:exon3:c.A402G:p.P134P,ENSG00000197217:ENST00000356206:exon12:c.A1593G:p.P531P,ENSG00000197217:ENST00000358689:exon12:c.A1617G:p.P539P,ENSG00000197217:ENST00000417069:exon12:c.A1593G:p.P531P	NA	NA	8p21.3	NA	NA	NA	NA	rs1142283	0.12	0.12	0.109	0.104633	0.1779	0.0565	0.2305	0.0401	0.0767	0.2	0.06	0.2	0.03	0.141	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.096141	NA	NA	0.170465	0.066273	NA	0.123	NA	5.1773016
1134	6	55620251	55620251	C	T	UTR3	BMP5	NM_021073:c.*80G>A	NA	NA	UTR3	ENSG00000112175	ENST00000370830:c.*80G>A,ENST00000446683:c.*80G>A	NA	NA	Score=295;Name=lod=21	NA	6p12.1	NA	NA	NA	NA	rs3756990	0.16	0.16	0.141	0.182109	0.1561	0.1548	0.2075	0.0998	0.3303	0.16	0.17	0.2	0.1	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.486935	NA	NA	NA	NA	NA	0.116	NA	5.1772334
1134	6	119500916	119500916	T	C	UTR3	MAN1A1	NM_005907:c.*68A>G	NA	NA	UTR3	ENSG00000111885	ENST00000368468:c.*68A>G	NA	NA	Score=488;Name=lod=128	NA	6q22.31	NA	NA	NA	NA	rs3756943	0.16	0.16	0.145	0.13758	0.1561	0.2163	0.1282	0.0325	0.1861	0.17	0.24	0.18	0.05	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.808125	1.808125	NA	NA	NA	NA	0.138	NA	5.1772334
1134	17	17079636	17079636	C	T	intronic	MPRIP	NA	NA	NA	ncRNA_intronic	ENSG00000263624	NA	NA	NA	NA	NA	17p11.2	NA	NA	Name=11	NA	rs55784627	0.07	0.07	0.066	0.0515176	0.1561	NA	0.0937	0.0068	0.0276	0.13	NA	0.12	0.01	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.051473	NA	NA	NA	NA	NA	0.058	NA	5.1772333
1134	3	183900680	183900680	G	C	intronic	AP2M1	NA	NA	NA	exonic	ENSG00000161203	NA	nonsynonymous SNV	ENSG00000161203:ENST00000442686:exon3:c.G267C:p.E89D	NA	NA	3q27.1	NA	NA	NA	NA	rs843366	0.34	0.34	0.316	0.341853	0.3072	0.5437	0.2983	0.1762	0.4243	0.3	0.56	0.3	0.19	0.3644	0.56	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.916	T	0.000	T	0.106	0.284	5.539	-1.21	-0.245	-0.251	5.939	0.284357	NA	0.5	0.318027	0.19555	NA	0.232	NA	5.1770397
1134	6	31322121	31322121	C	T	intronic	HLA-B	NA	NA	NA	intronic	ENSG00000234745	NA	NA	NA	NA	NA	6p21.33	NA	Name=Pol2-4H8	Name=4	NA	rs2428496	0.82	0.82	0.823	0.83726	0.8231	0.7629	0.879	0.8495	0.8824	0.81	0.76	0.88	0.84	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.018297	NA	NA	NA	NA	NA	0.855	NA	5.1769
1134	7	45753324	45753324	G	A	exonic	ADCY1	NA	synonymous SNV	ADCY1:NM_021116:exon20:c.G3090A:p.R1030R	exonic	ENSG00000164742	NA	synonymous SNV	ENSG00000164742:ENST00000297323:exon20:c.G3090A:p.R1030R	NA	NA	7p12.3	NA	NA	NA	NA	rs2293106	0.16	0.16	0.175	0.167133	0.173	0.121	0.1167	0.32	0.0378	0.17	0.1	0.14	0.24	0.149	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.380686	NA	NA	0.167791	0.304358	NA	0.246	NA	5.1768756
1134	18	56204410	56204410	C	T	exonic	ALPK2	NA	synonymous SNV	ALPK2:NM_052947:exon5:c.G3009A:p.R1003R	exonic	ENSG00000198796	NA	synonymous SNV	ENSG00000198796:ENST00000361673:exon5:c.G3009A:p.R1003R	NA	NA	18q21.32	NA	Name=Pol2-4H8	NA	NA	rs55910046	0.43	0.43	NA	0.404353	0.5736	0.2371	0.4294	0.4304	0.3497	0.58	0.24	0.51	0.38	0.4578	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.311738	NA	NA	0.458479	0.388788	ID=COSM1389315;OCCURENCE=1(large_intestine)	NA	NA	5.1767876
1134	11	64787880	64787880	T	C	ncRNA_intronic	ARL2-SNX15	NA	NA	NA	intronic	ENSG00000213465	NA	NA	NA	NA	NA	11q13.1	Score=851;Name=V$EVI1_05	NA	NA	NA	rs79393344	0.05	0.05	0.055	0.0601038	0.0467	NA	0.0432	0.1301	0.0532	0.05	NA	0.04	0.12	0.0581	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.455643	NA	NA	0.051897	0.108587	NA	0.051	NA	5.1766363
1134	11	119209979	119209979	T	A	UTR3	C1QTNF5,MFRP	NM_015645:c.*62A>T;NM_031433:c.*1690A>T	NA	NA	UTR3	ENSG00000223953,ENSG00000235718,ENSG00000259159	ENST00000445041:c.*62A>T,ENST00000528368:c.*62A>T;ENST00000555262:c.*1690A>T;ENST00000530681:c.*1690A>T	NA	NA	NA	NA	11q23.3	NA	NA	Name=12	NA	rs9640	0.16	0.16	0.17	0.13778	0.1571	0.0407	0.098	0.2731	0.0634	0.16	0.05	0.13	0.31	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.033096	NA	NA	NA	NA	NA	0.203	NA	5.1762334
1134	3	86062457	86062457	C	T	intronic	CADM2	NA	NA	NA	ncRNA_exonic	ENSG00000243915	NA	NA	NA	Score=692;Name=lod=869	NA	3p12.1	NA	NA	NA	NA	rs6771277	0.17	0.17	0.159	0.192292	0.1571	0.2083	0.1614	0.1725	0.2607	0.15	0.21	0.16	0.17	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.654902	NA	NA	NA	NA	NA	0.217	NA	5.1762333
1134	9	33968454	33968454	G	A	intronic	UBAP2	NA	NA	NA	ncRNA_exonic	ENSG00000226801	NA	NA	NA	Score=697;Name=lod=911	NA	9p13.3	NA	NA	NA	NA	rs307671	0.2	0.2	0.199	0.220048	0.1571	0.1637	0.1758	0.2504	0.3333	0.17	0.2	0.18	0.26	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.324416	NA	NA	NA	NA	NA	0.232	NA	5.1762333
1134	12	52841765	52841765	G	A	exonic	KRT6B	NA	synonymous SNV	KRT6B:NM_005555:exon7:c.C1221T:p.A407A	exonic	ENSG00000185479	NA	synonymous SNV	ENSG00000185479:ENST00000252252:exon7:c.C1221T:p.A407A	Score=550;Name=lod=230	NA	12q13.13	NA	NA	NA	NA	rs388626	0.58	0.58	0.558	0.517572	0.505	0.6825	0.572	0.4781	0.3753	0.5	0.77	0.56	0.49	0.4939	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.374247	NA	NA	0.491628	0.448933	NA	0.616	NA	5.1761386
1134	13	111591283	111591283	T	C	intergenic	ANKRD10,ARHGEF7	dist=23867;dist=176341	NA	NA	ncRNA_exonic	ENSG00000227105	NA	NA	NA	Score=682;Name=lod=785	NA	13q34	NA	Name=CTCF,Rad21	NA	NA	rs7334633	0.76	0.76	0.725	0.729433	0.8241	0.9256	0.7911	0.4349	0.7843	0.82	0.93	0.79	0.45	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.112134	NA	NA	NA	NA	NA	0.754	NA	5.1759
1134	14	92251587	92251587	A	G	exonic	TC2N	NA	synonymous SNV	TC2N:NM_001128595:exon11:c.T1281C:p.L427L,TC2N:NM_001128596:exon11:c.T1281C:p.L427L,TC2N:NM_152332:exon11:c.T1281C:p.L427L	exonic	ENSG00000165929	NA	synonymous SNV	ENSG00000165929:ENST00000556590:exon5:c.T537C:p.L179L,ENSG00000165929:ENST00000556018:exon10:c.T1089C:p.L363L,ENSG00000165929:ENST00000340892:exon11:c.T1281C:p.L427L,ENSG00000165929:ENST00000360594:exon11:c.T1281C:p.L427L,ENSG00000165929:ENST00000435962:exon11:c.T1281C:p.L427L	NA	NA	14q32.12	NA	NA	NA	NA	rs61990064	0.13	0.13	0.119	0.111222	0.173	0.1151	0.121	0.0582	0.1084	0.18	0.12	0.16	0.06	0.1509	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.53871	NA	NA	0.166977	0.069678	ID=COSM1178435,COSM1178434;OCCURENCE=1(prostate)	0.152	NA	5.1757896
1134	14	64909151	64909151	G	A	intronic	MTHFD1	NA	NA	NA	ncRNA_intronic	ENSG00000258824	NA	NA	NA	NA	NA	14q23.3	NA	Name=GATA-1	Name=7	NA	rs2236224	0.31	0.31	0.287	0.308307	0.3648	0.2917	0.5101	0.087	0.4233	0.36	0.3	0.49	0.12	0.3856	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.066346	NA	NA	0.407326	0.13754	NA	0.341	NA	5.1756073
1134	10	86004736	86004736	A	G	upstream	RGR	NA	NA	NA	upstream	ENSG00000148604	NA	NA	NA	NA	NA	10q23.1	NA	Name=HNF4A	Name=15	NA	rs2279228	0.59	0.59	0.593	0.6248	0.4911	0.495	0.5865	0.9486	0.4857	0.49	0.45	0.58	0.92	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.162	NA	NA	NA	NA	NA	0.63	NA	5.1755666
1134	3	86063401	86063401	G	A	intronic	CADM2	NA	NA	NA	ncRNA_exonic	ENSG00000243915	NA	NA	NA	Score=597;Name=lod=355	NA	3p12.1	NA	NA	NA	NA	rs9810027	0.17	0.17	0.155	0.19389	0.1581	0.2083	0.1614	0.1778	0.2607	0.15	0.21	0.16	0.17	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.255367	NA	NA	NA	NA	NA	0.225	NA	5.1752333
1134	3	158214530	158214530	G	T	intronic	RSRC1	NA	NA	NA	ncRNA_exonic	ENSG00000243314	NA	NA	NA	Score=433;Name=lod=77	NA	3q25.32	NA	NA	NA	NA	rs73020715	0.19	0.19	0.194	0.222244	0.1581	0.0903	0.2118	0.3971	0.1953	0.17	0.09	0.18	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.370496	NA	NA	NA	NA	NA	0.283	NA	5.1752333
1134	15	25924539	25924539	T	C	exonic	ATP10A	NA	synonymous SNV	ATP10A:NM_024490:exon21:c.A4449G:p.Q1483Q	exonic	ENSG00000206190	NA	synonymous SNV	ENSG00000206190:ENST00000356865:exon21:c.A4449G:p.Q1483Q	NA	NA	15q12	NA	NA	NA	NA	rs1047700	0.27	0.27	0.258	0.266374	0.1382	0.2748	0.3386	0.4153	0.137	0.13	0.31	0.31	0.42	0.1977	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.025745	NA	NA	0.155698	0.370177	NA	0.225	NA	5.1750686
1135	11	47350287	47350287	G	A	intronic	MADD	NA	NA	NA	intronic	ENSG00000110514	NA	NA	NA	NA	NA	11p11.2	NA	Name=EBF,PU.1	Name=9	NA	rs2305280	0.4	0.4	0.399	0.424521	0.2495	0.6657	0.3026	0.4939	0.3487	0.25	0.62	0.33	0.44	0.3322	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.104227	NA	NA	0.243718	0.450023	ID=COSN163924;OCCURENCE=1(NS)	0.254	NA	5.174582
1135	10	95718600	95718600	T	C	ncRNA_exonic	PIPSL	NA	NA	NA	ncRNA_exonic	ENSG00000180764	NA	NA	NA	Score=667;Name=lod=688	NA	10q23.33	NA	NA	NA	NA	rs11815169	0.24	0.24	0.216	0.25619	0.2425	0.2242	0.1542	0.3578	0.2382	0.23	0.22	0.18	0.33	0.2498	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.2186	NA	0.28	NA	NA	NA	0.225	NA	5.1743666
1135	21	46097193	46097193	T	C	intronic	TSPEAR	NA	NA	NA	ncRNA_exonic	ENSG00000229880	NA	NA	NA	Score=512;Name=lod=160	NA	21q22.3	NA	NA	NA	NA	rs2838626	0.13	0.13	0.122	0.130791	0.159	0.0923	0.1484	0.0923	0.181	0.16	0.1	0.15	0.09	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.150324	NA	NA	NA	NA	NA	0.058	NA	5.1743333
1135	1	157485429	157485429	C	G	exonic	FCRL5	NA	nonsynonymous SNV	FCRL5:NM_001195388:exon17:c.G2960C:p.C987S	UTR3	ENSG00000143297	ENST00000361835:c.*36G>C,ENST00000356953:c.*36G>C	NA	NA	NA	NA	1q23.1	NA	NA	NA	NA	rs60516051	0.06	0.06	0.048	0.0597045	0.0676	0.001	0.0447	0.1407	0.0133	0.06	NA	0.06	0.1	0.0417	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.422987	NA	NA	0.049884	0.106673	NA	0.051	NA	5.1741494
1135	15	28517436	28517436	T	C	exonic	HERC2	NA	synonymous SNV	HERC2:NM_004667:exon9:c.A1008G:p.P336P	exonic	ENSG00000128731	NA	synonymous SNV	ENSG00000128731:ENST00000261609:exon9:c.A1008G:p.P336P	NA	NA	15q13.1	NA	NA	NA	NA	rs75181529	NA	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4931	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.10352	NA	NA	NA	NA	NA	NA	NA	5.1735666
1135	2	170115588	170115588	T	C	exonic	LRP2	NA	synonymous SNV	LRP2:NM_004525:exon17:c.A2460G:p.T820T	exonic	ENSG00000081479	NA	synonymous SNV	ENSG00000081479:ENST00000443831:exon15:c.A2049G:p.T683T,ENSG00000081479:ENST00000263816:exon17:c.A2460G:p.T820T	NA	NA	2q31.1	NA	NA	NA	NA	rs2241190	0.54	0.54	0.514	0.622404	0.4791	0.4841	0.6383	0.7141	0.7771	0.47	0.47	0.62	0.69	0.5464	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.97567	NA	NA	0.467674	0.689287	NA	0.638	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117518.2;CLNDSDB=.;CLNDSDBID=.	5.1734926
1135	11	47182926	47182926	G	A	UTR3	C11orf49	NM_001003676:c.*181G>A	NA	NA	UTR3	ENSG00000149179	ENST00000395460:c.*181G>A	NA	NA	NA	NA	11p11.2	NA	Name=Pol2(phosphoS2),CTCF	NA	NA	rs3740694	0.1	0.1	0.097	0.132987	0.16	0.0694	0.0836	0.0144	0.3661	0.17	0.09	0.09	0.02	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.8016	NA	NA	NA	NA	NA	0.043	NA	5.1733334
1135	12	133295501	133295501	T	C	UTR3	PGAM5	NM_138575:c.*105T>C	NA	NA	UTR3	ENSG00000247077	ENST00000317555:c.*105T>C	NA	NA	NA	NA	12q24.33	NA	Name=Pol2,Pol2(phosphoS2)	NA	NA	rs11147015	0.27	0.27	0.214	0.256789	0.16	0.5298	0.2867	0.0946	0.273	0.17	0.54	0.3	0.11	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.194452	NA	NA	NA	NA	NA	0.21	NA	5.1733334
1135	5	147016368	147016368	C	T	ncRNA_intronic	JAKMIP2-AS1	NA	NA	NA	intronic	ENSG00000176049	NA	NA	NA	Score=336;Name=lod=31	NA	5q32	NA	NA	NA	NA	rs2116768	0.29	0.29	0.266	0.313898	0.16	0.4732	0.3501	0.3094	0.2883	0.14	0.47	0.29	0.32	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.177302	NA	NA	NA	NA	NA	0.283	NA	5.1733333
1135	6	134618545	134618545	C	T	intronic	SGK1	NA	NA	NA	ncRNA_exonic	ENSG00000220378	NA	NA	NA	Score=653;Name=lod=600	NA	6q23.2	NA	NA	NA	NA	rs9493887	0.22	0.22	0.176	0.190495	0.16	0.3194	0.2536	0.1346	0.1196	0.17	0.34	0.22	0.13	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.051407	NA	NA	NA	NA	NA	0.13	NA	5.1733333
1135	16	81510071	81510071	G	A	intronic	CMIP	NA	NA	NA	ncRNA_exonic	ENSG00000260229	NA	NA	NA	Score=541;Name=lod=210	NA	16q23.2	NA	NA	NA	NA	rs9925828	0.11	0.11	0.087	0.103235	0.16	0.0129	0.1225	0.0877	0.1452	0.16	0.01	0.13	0.11	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.198027	NA	NA	NA	NA	NA	0.08	NA	5.1733333
1135	10	37505179	37505179	T	C	exonic	ANKRD30A	NA	synonymous SNV	ANKRD30A:NM_052997:exon32:c.T2772C:p.D924D	exonic	ENSG00000148513	NA	synonymous SNV	ENSG00000148513:ENST00000361713:exon32:c.T2772C:p.D924D,ENSG00000148513:ENST00000602533:exon32:c.T2772C:p.D924D,ENSG00000148513:ENST00000374660:exon38:c.T3129C:p.D1043D	NA	NA	10p11.21	NA	NA	NA	NA	rs57914746	0.17	0.17	0.177	0.158746	0.171	0.1161	0.1095	0.2837	0.0562	0.17	0.11	0.15	0.28	0.1481	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.711213	NA	NA	0.174244	0.292656	NA	0.152	NA	5.1733226
1135	5	40746885	40746885	A	T	intronic	TTC33	NA	NA	NA	intronic	ENSG00000113638	NA	NA	NA	NA	NA	5p13.1	NA	Name=FOXA1_(C-20)	Name=37	NA	rs3805497	0.35	0.35	0.318	0.350439	0.2565	0.5526	0.2363	0.3457	0.3262	0.26	0.54	0.28	0.3	0.3223	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.065234	NA	NA	0.248081	0.323716	NA	0.246	NA	5.173119
1135	2	112702647	112702647	C	T	intronic	MERTK	NA	NA	NA	intronic	ENSG00000153208	NA	NA	NA	NA	NA	2q13	NA	Name=HNF4G_(SC-6558),FOXA1_(SC-101058),FOXA2_(SC-6554),p300,FOXA1_(C-20),HNF4A_(H-171),GATA3_(SC-268),SP1	Name=6	NA	rs11683694	0.18	0.18	0.172	0.190695	0.2863	0.1726	0.1888	0.1036	0.2301	0.25	0.12	0.22	0.11	0.2395	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.70203	NA	NA	0.301279	0.145937	NA	0.21	NA	5.172921
1135	14	21960816	21960816	T	C	exonic	TOX4	NA	synonymous SNV	TOX4:NM_014828:exon7:c.T1041C:p.L347L	exonic	ENSG00000092203	NA	synonymous SNV	ENSG00000092203:ENST00000448790:exon6:c.T972C:p.L324L,ENSG00000092203:ENST00000262709:exon7:c.T1041C:p.L347L,ENSG00000092203:ENST00000405508:exon8:c.T1041C:p.L347L	Score=678;Name=lod=759	NA	14q11.2	NA	NA	NA	NA	rs1060722	0.5	0.5	0.498	0.495607	0.503	0.6488	0.3746	0.4281	0.5072	0.48	0.66	0.4	0.41	0.4887	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.784186	NA	NA	0.502093	0.468906	NA	0.529	NA	5.1728736
1135	11	56468403	56468403	G	A	exonic	OR9G1,OR9G9	NA	synonymous SNV	OR9G1:NM_001005213:exon1:c.G540A:p.L180L,OR9G9:NM_001013358:exon1:c.G540A:p.L180L	exonic	ENSG00000174914	NA	synonymous SNV	ENSG00000174914:ENST00000312153:exon1:c.G540A:p.L180L	NA	NA	11q12.1	NA	NA	NA	NA	rs11228734	0.49	0.49	NA	NA	NA	NA	NA	NA	NA	0.49	0.48	0.5	0.5	0.4939	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.025311	NA	NA	NA	NA	NA	0.232	NA	5.1727666
1135	18	9887433	9887433	A	G	exonic	TXNDC2	NA	synonymous SNV	TXNDC2:NM_001098529:exon2:c.A957G:p.E319E,TXNDC2:NM_032243:exon2:c.A756G:p.E252E	exonic	ENSG00000168454	NA	synonymous SNV	ENSG00000168454:ENST00000306084:exon2:c.A957G:p.E319E,ENSG00000168454:ENST00000357775:exon2:c.A756G:p.E252E	NA	NA	18p11.22	NA	NA	NA	NA	rs2240907	0.1	0.1	0.08	0.249002	0.2952	0.1508	0.1787	0.3472	0.2198	0.1	0.08	0.1	0.12	0.0085	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.063796	NA	NA	0.190393	0.195958	NA	0.007	NA	5.1725736
1135	2	208994045	208994045	T	G	ncRNA_intronic	LOC100507443	NA	NA	NA	intronic	ENSG00000163254	NA	NA	NA	NA	Name=Attention deficit hyperactivity disorder	2q33.3	NA	NA	NA	NA	rs2242073	0.17	0.17	0.16	0.14976	0.161	0.0437	0.2233	0.2526	0.0562	0.17	0.06	0.21	0.27	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.376197	NA	NA	NA	NA	NA	0.116	NA	5.1723333
1135	5	147019114	147019114	T	C	ncRNA_intronic	JAKMIP2-AS1	NA	NA	NA	intronic	ENSG00000176049	NA	NA	NA	NA	NA	5q32	NA	Name=p300,FOXA1_(SC-101058),TCF4,FOXA1_(C-20)	NA	NA	rs10515588	0.29	0.29	0.278	0.311701	0.161	0.4702	0.3501	0.3086	0.2802	0.14	0.47	0.29	0.31	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.507413	NA	NA	NA	NA	NA	0.275	NA	5.1723333
1135	10	100807804	100807804	G	T	intronic	HPSE2	NA	NA	NA	ncRNA_exonic	ENSG00000234109	NA	NA	NA	Score=706;Name=lod=983	NA	10q24.2	NA	NA	NA	NA	rs75197398	0.15	0.15	0.137	0.130791	0.161	0.1438	0.2378	0.0439	0.1278	0.16	0.15	0.23	0.05	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.596238	NA	NA	NA	NA	NA	0.094	NA	5.1723333
1135	17	21319110	21319110	G	A	exonic	KCNJ12,KCNJ18	NA	synonymous SNV	KCNJ18:NM_001194958:exon3:c.G456A:p.T152T,KCNJ12:NM_021012:exon3:c.G456A:p.T152T	exonic	ENSG00000184185	NA	synonymous SNV	ENSG00000184185:ENST00000331718:exon3:c.G456A:p.T152T,ENSG00000184185:ENST00000583088:exon3:c.G456A:p.T152T	NA	NA	17p11.2	NA	NA	NA	NA	rs77283567	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.4944	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.422832	NA	NA	NA	NA	NA	0.007	NA	5.1722666
1135	6	32797361	32797361	C	T	intronic	TAP2	NA	NA	NA	intronic	ENSG00000204267,ENSG00000250264	NA	NA	NA	NA	NA	6p21.32	NA	Name=ZNF263	Name=3	NA	rs241440	0.27	0.27	0.253	0.290335	0.2763	0.3621	0.2997	0.1263	0.4458	0.27	0.37	0.28	0.16	0.2888	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.042247	NA	NA	0.262674	0.152519	NA	0.174	NA	5.172226
1135	6	29913344	29913344	G	T	UTR3	HLA-A	NM_001242758:c.*112G>T,NM_002116:c.*112G>T	NA	NA	UTR3	ENSG00000206503	ENST00000396634:c.*112G>T,ENST00000376806:c.*112G>T,ENST00000376809:c.*112G>T,ENST00000376802:c.*112G>T	NA	NA	NA	NA	6p22.1	NA	Name=Pol2-4H8	NA	NA	rs13395	0.24	0.24	0.258	0.215256	0.162	0.1845	0.1787	0.2912	0.2249	0.16	0.29	0.26	0.3	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.13736	NA	NA	NA	NA	NA	0.094	NA	5.1713334
1135	14	35704667	35704667	C	T	intronic	KIAA0391	NA	NA	NA	ncRNA_exonic	ENSG00000256243	NA	NA	NA	Score=722;Name=lod=1144	NA	14q13.2	NA	NA	NA	NA	rs17113838	0.19	0.19	0.155	0.179912	0.162	0.3651	0.2017	0.0325	0.1912	0.16	0.36	0.18	0.05	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.355374	NA	NA	NA	NA	NA	0.203	NA	5.1713333
1135	10	47133818	47133818	G	A	ncRNA_exonic	HNRNPA1P33	NA	NA	NA	ncRNA_exonic	ENSG00000213412	NA	NA	NA	Score=520;Name=lod=173	NA	10q11.22	NA	NA	NA	NA	rs4979737	NA	NA	NA	0.500399	0.496	0.501	0.4942	0.5076	0.499	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.283915	NA	NA	NA	NA	NA	0.5	NA	5.1706666
1135	19	36640764	36640764	C	T	UTR3	CAPNS1	NM_001749:c.*23C>T,NM_001003962:c.*23C>T	NA	NA	UTR3	ENSG00000126247	ENST00000246533:c.*23C>T,ENST00000589146:c.*23C>T,ENST00000587718:c.*37C>T,ENST00000590874:c.*23C>T,ENST00000588815:c.*23C>T,ENST00000588780:c.*23C>T,ENST00000586851:c.*23C>T	NA	NA	NA	NA	19q13.12	NA	NA	Name=2	NA	rs1049339	0.02	0.02	0.009	0.01877	0.0567	NA	0.0331	0.0015	0.0123	0.05	NA	0.03	0.0041	0.0412	0.065	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.438373	1.438373	NA	0.064767	0.012256	NA	0.022	NA	5.1706664
1135	22	38477930	38477930	G	A	exonic	SLC16A8	NA	synonymous SNV	SLC16A8:NM_013356:exon3:c.C324T:p.L108L	exonic	ENSG00000100156	NA	synonymous SNV	ENSG00000100156:ENST00000320521:exon3:c.C324T:p.L108L	Score=619;Name=lod=438	NA	22q13.1	NA	NA	NA	NA	rs2235573	0.46	0.46	0.458	0.435304	0.493	0.4831	0.4524	0.4145	0.3425	0.49	0.5	0.42	0.4	0.5253	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.464029	1.464029	NA	0.477845	0.42098	ID=COSM444984;OCCURENCE=1(breast)	0.399	NA	5.1705216
1135	5	159377560	159377560	G	A	intronic	ADRA1B	NA	NA	NA	ncRNA_exonic	ENSG00000248626	NA	NA	NA	Score=803;Name=lod=2455	NA	5q33.3	NA	NA	NA	NA	rs35591745	0.18	0.18	0.167	0.152157	0.163	0.3046	0.17	0.0129	0.1595	0.17	0.34	0.17	0.02	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.546208	NA	NA	NA	NA	NA	0.138	NA	5.1703333
1135	2	224844919	224844919	C	G	intronic	SERPINE2	NA	NA	NA	intronic	ENSG00000135919	NA	NA	NA	NA	NA	2q36.1	NA	Name=USF2,USF-1	Name=45	NA	rs729631	0.69	0.69	0.689	0.679712	0.83	0.4365	0.8213	0.7057	0.6401	0.84	0.45	0.78	0.69	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3198	NA	NA	NA	NA	NA	0.819	NA	5.17
1135	1	156281020	156281020	G	C	intronic	CCT3	NA	NA	NA	intronic	ENSG00000163468	NA	NA	NA	NA	NA	1q22	NA	Name=JunD,CEBPB	Name=73	NA	rs12132794	0.21	0.21	0.183	0.196685	0.2694	0.2262	0.2738	0.059	0.2229	0.27	0.23	0.23	0.06	0.2681	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.469649	NA	NA	0.292907	0.093509	NA	0.196	NA	5.169593
1135	12	24737061	24737061	G	A	ncRNA_exonic	LINC00477	NA	NA	NA	ncRNA_exonic	ENSG00000197503,ENSG00000256852	NA	NA	NA	NA	NA	12p12.1	NA	Name=PU.1,ELF1_(SC-631)	NA	NA	rs7969489	0.33	0.33	0.345	0.387181	0.1501	0.7421	0.3804	0.3979	0.2556	0.12	0.68	0.31	0.27	0.2432	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.723027	NA	NA	0.103837	0.281207	NA	NA	NA	5.1695296
1135	12	4745193	4745193	T	C	intronic	AKAP3	NA	NA	NA	ncRNA_exonic	ENSG00000256799	NA	NA	NA	Score=635;Name=lod=509	NA	12p13.32	NA	NA	NA	NA	rs2267544	0.3	0.3	0.326	0.340655	0.164	0.4355	0.1772	0.4206	0.4325	0.16	0.46	0.2	0.42	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.22858	NA	NA	NA	NA	NA	0.239	NA	5.1693333
1135	12	32879346	32879346	C	A	intronic	DNM1L	NA	NA	NA	ncRNA_exonic	ENSG00000257511	NA	NA	NA	Score=772;Name=lod=1833	NA	12p11.21	NA	NA	NA	NA	rs10844324	0.14	0.14	0.139	0.14377	0.164	0.0823	0.1037	0.2103	0.1247	0.16	0.07	0.1	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.040462	NA	NA	NA	NA	NA	0.101	NA	5.1693333
1135	6	111695268	111695268	C	T	exonic	REV3L	NA	synonymous SNV	REV3L:NM_002912:exon13:c.G4290A:p.V1430V	exonic	ENSG00000009413	NA	synonymous SNV	ENSG00000009413:ENST00000368802:exon13:c.G4290A:p.V1430V,ENSG00000009413:ENST00000358835:exon14:c.G4290A:p.V1430V,ENSG00000009413:ENST00000368805:exon14:c.G4290A:p.V1430V,ENSG00000009413:ENST00000435970:exon15:c.G4056A:p.V1352V	Score=541;Name=lod=210	NA	6q21	NA	NA	NA	NA	rs455732	0.38	0.38	0.346	0.354034	0.496	0.4187	0.4337	0.0461	0.501	0.51	0.44	0.44	0.06	0.4703	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.468473	NA	NA	0.531403	0.127553	NA	0.464	NA	5.1689636
1135	20	26094605	26094605	G	A	ncRNA_exonic	NCOR1P1	NA	NA	NA	ncRNA_exonic	ENSG00000240108	NA	NA	NA	Score=565;Name=lod=263	NA	20p11.1	NA	NA	NA	NA	rs150462295	NA	NA	0.288	0.000399361	0.002	NA	NA	NA	NA	NA	NA	NA	NA	0.4958	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.517955	NA	NA	NA	NA	NA	NA	NA	5.1688666
1135	5	43587448	43587448	G	T	ncRNA_intronic	LOC100652772	NA	NA	NA	ncRNA_exonic	ENSG00000249286	NA	NA	NA	Score=748;Name=lod=1465	NA	5p12	NA	NA	NA	NA	rs7705166	0.39	0.39	0.392	0.38738	0.498	0.0913	0.379	0.5756	0.3303	0.47	0.1	0.43	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.819206	NA	NA	NA	NA	NA	0.5	NA	5.1686666
1135	16	28856819	28856819	C	T	intronic	TUFM	NA	NA	NA	intronic	ENSG00000178952	NA	NA	NA	NA	NA	16p11.2	NA	Name=Pol2,FOXA1_(SC-101058),HA-E2F1,FOXA1_(C-20),TBP	Name=73	NA	rs8061877	0.32	0.32	0.318	0.373203	0.2664	0.4514	0.2464	0.2466	0.6636	0.24	0.45	0.31	0.29	0.3086	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.224649	NA	NA	0.256395	0.227811	NA	0.341	NA	5.168605
1135	14	71061549	71061549	A	G	intronic	MED6	NA	NA	NA	ncRNA_exonic	ENSG00000258951	NA	NA	NA	Score=523;Name=lod=178	NA	14q24.2	NA	NA	NA	NA	rs7156661	0.34	0.34	0.359	0.352236	0.165	0.5258	0.183	0.5552	0.2117	0.16	0.52	0.17	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.240767	NA	NA	NA	NA	NA	0.348	NA	5.1683333
1135	15	55653031	55653031	A	G	exonic	CCPG1	NA	synonymous SNV	CCPG1:NM_001204450:exon8:c.T940C:p.L314L,CCPG1:NM_004748:exon8:c.T940C:p.L314L,CCPG1:NM_020739:exon8:c.T940C:p.L314L	exonic	ENSG00000260916	NA	synonymous SNV	ENSG00000260916:ENST00000310958:exon8:c.T940C:p.L314L,ENSG00000260916:ENST00000442196:exon8:c.T940C:p.L314L,ENSG00000260916:ENST00000569205:exon8:c.T940C:p.L314L	Score=431;Name=lod=75	NA	15q21.3	NA	NA	NA	NA	rs501231	0.47	0.47	0.485	0.455471	0.5209	0.256	0.3329	0.6672	0.3947	0.52	0.3	0.36	0.67	0.4674	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.170275	2.170275	NA	0.51079	0.665292	ID=COSM147921;OCCURENCE=1(stomach)	0.348	NA	5.1675766
1135	6	111696852	111696852	T	C	exonic	REV3L	NA	synonymous SNV	REV3L:NM_002912:exon13:c.A2706G:p.G902G	exonic	ENSG00000009413	NA	synonymous SNV	ENSG00000009413:ENST00000368802:exon13:c.A2706G:p.G902G,ENSG00000009413:ENST00000358835:exon14:c.A2706G:p.G902G,ENSG00000009413:ENST00000368805:exon14:c.A2706G:p.G902G,ENSG00000009413:ENST00000435970:exon15:c.A2472G:p.G824G	Score=557;Name=lod=245	NA	6q21	NA	NA	NA	NA	rs458486	0.38	0.38	0.36	0.354233	0.497	0.4187	0.4337	0.0461	0.501	0.51	0.44	0.44	0.06	0.471	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.237859	NA	NA	0.53117	0.12778	NA	0.471	NA	5.1674966
1135	17	21205460	21205460	C	T	exonic	MAP2K3	NA	synonymous SNV	MAP2K3:NM_002756:exon6:c.C318T:p.D106D,MAP2K3:NM_145109:exon6:c.C405T:p.D135D	exonic	ENSG00000034152	NA	synonymous SNV	ENSG00000034152:ENST00000342679:exon6:c.C405T:p.D135D,ENSG00000034152:ENST00000361818:exon6:c.C318T:p.D106D,ENSG00000034152:ENST00000496046:exon6:c.C405T:p.D135D,ENSG00000034152:ENST00000526076:exon6:c.C318T:p.D106D,ENSG00000034152:ENST00000316920:exon7:c.C318T:p.D106D	NA	NA	17p11.2	NA	NA	NA	NA	rs62057721	0.5	0.5	0.43	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.4993	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.084238	NA	NA	NA	NA	NA	0.5	NA	5.1673666
1135	6	57467107	57467107	C	T	exonic	PRIM2	NA	unknown	UNKNOWN	UTR3	ENSG00000146143	ENST00000607273:c.*7C>T	NA	NA	Score=531;Name=lod=191	NA	6p11.2	NA	NA	NA	NA	rs9885751	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4994	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.621416	2.621416	0	NA	NA	ID=COSM150114;OCCURENCE=1(stomach)	0.442	NA	5.1672667
1135	12	24737062	24737062	C	A	ncRNA_exonic	LINC00477	NA	NA	NA	ncRNA_exonic	ENSG00000197503,ENSG00000256852	NA	NA	NA	NA	NA	12p12.1	NA	Name=PU.1,ELF1_(SC-631)	NA	NA	rs7969292	0.33	0.33	0.351	0.388978	0.1501	0.748	0.3833	0.3986	0.2556	0.12	0.68	0.31	0.27	0.2432	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.243258	NA	NA	0.106395	0.286882	NA	NA	NA	5.1669716
1135	1	48697751	48697751	C	T	exonic	SLC5A9	NA	synonymous SNV	SLC5A9:NM_001011547:exon7:c.C825T:p.S275S,SLC5A9:NM_001135181:exon8:c.C900T:p.S300S	exonic	ENSG00000117834	NA	synonymous SNV	ENSG00000117834:ENST00000438567:exon7:c.C825T:p.S275S,ENSG00000117834:ENST00000236495:exon8:c.C900T:p.S300S,ENSG00000117834:ENST00000533824:exon8:c.C888T:p.S296S	NA	NA	1p33	NA	NA	NA	NA	rs61997212	0.09	0.09	0.087	0.0658946	0.17	NA	0.0879	0.0174	0.0767	0.18	NA	0.11	0.03	0.1345	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.070687	NA	NA	0.195233	0.036995	NA	0.094	NA	5.1669336
1135	11	56468259	56468259	C	T	exonic	OR9G1,OR9G9	NA	synonymous SNV	OR9G1:NM_001005213:exon1:c.C396T:p.A132A,OR9G9:NM_001013358:exon1:c.C396T:p.A132A	exonic	ENSG00000174914	NA	synonymous SNV	ENSG00000174914:ENST00000312153:exon1:c.C396T:p.A132A	NA	NA	11q12.1	NA	NA	NA	NA	rs503776	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.4998	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.113358	NA	NA	NA	NA	NA	0.5	NA	5.1668666
1135	14	77978621	77978621	A	C	UTR3	SPTLC2	NM_004863:c.*6T>G	NA	NA	UTR3	ENSG00000100596	ENST00000216484:c.*6T>G	NA	NA	Score=501;Name=lod=145	NA	14q24.3	NA	NA	NA	NA	rs73319080	0.05	0.05	0.044	0.0547125	0.0606	0.001	0.0418	0.1059	0.044	0.06	NA	0.05	0.09	0.0515	0.097	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.128858	2.128858	NA	0.054419	0.096686	NA	0.051	NA	5.1668144
1135	11	48346729	48346729	G	C	exonic	OR4C3	NA	synonymous SNV	OR4C3:NM_001004702:exon1:c.G237C:p.T79T	exonic	ENSG00000176547	NA	synonymous SNV	ENSG00000176547:ENST00000319856:exon1:c.G237C:p.T79T	NA	NA	11p11.2	NA	NA	NA	NA	rs73463990	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.4999	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.411814	NA	NA	NA	NA	NA	0.5	NA	5.1667666
1135	17	21204257	21204257	G	A	exonic	MAP2K3	NA	synonymous SNV	MAP2K3:NM_002756:exon5:c.G264A:p.T88T,MAP2K3:NM_145109:exon5:c.G351A:p.T117T	exonic	ENSG00000034152	NA	synonymous SNV	ENSG00000034152:ENST00000342679:exon5:c.G351A:p.T117T,ENSG00000034152:ENST00000361818:exon5:c.G264A:p.T88T,ENSG00000034152:ENST00000496046:exon5:c.G351A:p.T117T,ENSG00000034152:ENST00000526076:exon5:c.G264A:p.T88T,ENSG00000034152:ENST00000316920:exon6:c.G264A:p.T88T	NA	NA	17p11.2	NA	NA	NA	NA	rs56166328	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4999	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.266645	1.266645	NA	NA	NA	ID=COSM298238;OCCURENCE=1(large_intestine)	0.428	NA	5.1667666
1135	10	46998795	46998795	A	G	intronic	GPRIN2	NA	NA	NA	UTR5	ENSG00000204175	ENST00000374314:c.-86A>G	NA	NA	NA	NA	10q11.22	NA	Name=MafK_(ab50322)	NA	NA	rs3127677	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.036725	NA	NA	NA	NA	NA	0.5	NA	5.1666667
1135	12	133237454	133237454	T	C	intronic	POLE	NA	NA	NA	UTR5	ENSG00000177084	ENST00000536445:c.-1368A>G	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.148331	NA	NA	NA	NA	NA	NA	NA	5.1666667
1135	1	144874760	144874760	T	C	exonic	PDE4DIP	NA	synonymous SNV	PDE4DIP:NM_001198834:exon30:c.A4848G:p.E1616E,PDE4DIP:NM_014644:exon30:c.A4848G:p.E1616E,PDE4DIP:NM_001198832:exon33:c.A4716G:p.E1572E	exonic	ENSG00000178104	NA	synonymous SNV	ENSG00000178104:ENST00000369354:exon30:c.A4848G:p.E1616E,ENSG00000178104:ENST00000369356:exon30:c.A4848G:p.E1616E,ENSG00000178104:ENST00000313382:exon33:c.A4716G:p.E1572E,ENSG00000178104:ENST00000369359:exon33:c.A5256G:p.E1752E,ENSG00000178104:ENST00000530740:exon33:c.A5256G:p.E1752E	NA	NA	1q21.1	NA	NA	NA	NA	rs1610774	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.088785	NA	NA	NA	NA	NA	0.5	NA	5.1666666
1135	11	48346843	48346843	C	T	exonic	OR4C3	NA	synonymous SNV	OR4C3:NM_001004702:exon1:c.C351T:p.I117I	exonic	ENSG00000176547	NA	synonymous SNV	ENSG00000176547:ENST00000319856:exon1:c.C351T:p.I117I	NA	NA	11p11.2	NA	NA	NA	NA	rs73463998	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.25367	NA	NA	NA	NA	NA	0.391	NA	5.1666666
1135	11	48347023	48347023	C	T	exonic	OR4C3	NA	synonymous SNV	OR4C3:NM_001004702:exon1:c.C531T:p.G177G	exonic	ENSG00000176547	NA	synonymous SNV	ENSG00000176547:ENST00000319856:exon1:c.C531T:p.G177G	NA	NA	11p11.2	NA	NA	NA	NA	rs67077733	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.711203	NA	NA	NA	NA	NA	0.486	NA	5.1666666
1135	6	57512678	57512678	G	A	exonic	PRIM2	NA	unknown	UNKNOWN	UTR3	ENSG00000146143	ENST00000607273:c.*465G>A	NA	NA	Score=329;Name=lod=29	NA	6p11.2	NA	NA	NA	NA	rs4398719	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5002	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.348618	NA	NA	NA	NA	NA	0.493	NA	5.1664667
1135	3	125856695	125856695	C	A	exonic	ALDH1L1	NA	synonymous SNV	ALDH1L1:NM_001270365:exon8:c.G882T:p.L294L,ALDH1L1:NM_001270364:exon10:c.G1215T:p.L405L,ALDH1L1:NM_012190:exon10:c.G1185T:p.L395L	exonic	ENSG00000144908	NA	synonymous SNV	ENSG00000144908:ENST00000452905:exon8:c.G882T:p.L294L,ENSG00000144908:ENST00000273450:exon10:c.G1215T:p.L405L,ENSG00000144908:ENST00000393431:exon10:c.G1185T:p.L395L,ENSG00000144908:ENST00000393434:exon10:c.G1185T:p.L395L,ENSG00000144908:ENST00000472186:exon10:c.G1185T:p.L395L	NA	NA	3q21.3	NA	NA	NA	NA	rs2305230	0.25	0.25	0.243	0.244808	0.166	0.2321	0.1945	0.4418	0.1084	0.17	0.23	0.22	0.4	0.1687	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.099033	NA	NA	0.165581	0.386972	NA	0.188	NA	5.1663856
1135	1	159402219	159402219	G	A	intergenic	OR10J3,OR10J1	dist=117770;dist=7293	NA	NA	exonic	ENSG00000249730	NA	unknown	UNKNOWN	NA	NA	1q23.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0003	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.98348	NA	0.02	NA	NA	NA	NA	NA	5.1663667
1135	6	57512476	57512476	G	A	exonic	PRIM2	NA	unknown	UNKNOWN	UTR3	ENSG00000146143	ENST00000607273:c.*263G>A	NA	NA	Score=516;Name=lod=166	NA	6p11.2	NA	NA	NA	NA	rs4307164	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5003	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.663232	2.663232	0.91	NA	NA	NA	0.362	NA	5.1663667
1135	19	4511830	4511830	A	G	exonic	PLIN4	NA	synonymous SNV	PLIN4:NM_001080400:exon3:c.T2100C:p.T700T	exonic	ENSG00000167676	NA	synonymous SNV	ENSG00000167676:ENST00000301286:exon3:c.T2100C:p.T700T	NA	NA	19p13.3	NA	NA	NA	NA	rs7257142	0.46	0.46	NA	NA	NA	NA	NA	NA	NA	0.46	0.46	0.43	0.47	0.5003	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.179668	NA	NA	NA	NA	NA	0.094	NA	5.1663666
1135	20	26094564	26094564	T	G	ncRNA_exonic	NCOR1P1	NA	NA	NA	ncRNA_exonic	ENSG00000240108	NA	NA	NA	Score=565;Name=lod=263	NA	20p11.1	NA	NA	NA	NA	rs79802274	NA	NA	0.381	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5003	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.191791	NA	0.65	NA	NA	NA	NA	NA	5.1663666
1135	19	19387356	19387356	C	T	UTR3	SUGP1	NM_172231:c.*101G>A	NA	NA	UTR3	ENSG00000105705	ENST00000589144:c.*1444G>A,ENST00000588731:c.*1566G>A,ENST00000247001:c.*101G>A,ENST00000587119:c.*1741G>A	NA	NA	NA	NA	19p13.11	NA	NA	Name=52	NA	rs2010506	0.13	0.13	0.146	0.116414	0.167	NA	0.1153	0.177	0.1033	0.15	NA	0.14	0.23	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.046226	2.046226	NA	NA	NA	NA	0.21	NA	5.1663334
1135	9	18718086	18718086	G	T	intronic	ADAMTSL1	NA	NA	NA	ncRNA_exonic	ENSG00000236857	NA	NA	NA	Score=749;Name=lod=1470	NA	9p22.1	NA	NA	NA	NA	rs4977338	0.23	0.23	0.21	0.209265	0.167	0.3423	0.2651	0.1324	0.18	0.17	0.35	0.22	0.16	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.042338	NA	NA	NA	NA	NA	0.188	NA	5.1663333
1135	20	42281914	42281914	A	G	intergenic	IFT52,MYBL2	dist=6052;dist=13795	NA	NA	ncRNA_exonic	ENSG00000215467	NA	NA	NA	Score=645;Name=lod=560	NA	20q13.12	NA	Name=TCF4,RXRA,Sin3Ak-20	NA	NA	rs285195	0.85	0.85	0.859	0.872604	0.834	0.8145	0.8271	0.9803	0.8589	0.83	0.79	0.84	0.98	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.177289	NA	NA	NA	NA	NA	0.855	NA	5.166
1135	10	76855421	76855421	G	A	exonic	DUSP13	NA	synonymous SNV	DUSP13:NM_001007272:exon3:c.C456T:p.I152I,DUSP13:NM_016364:exon3:c.C306T:p.I102I,DUSP13:NM_001007273:exon5:c.C585T:p.I195I	exonic	ENSG00000079393	NA	synonymous SNV	ENSG00000079393:ENST00000372700:exon3:c.C456T:p.I152I,ENSG00000079393:ENST00000472493:exon3:c.C306T:p.I102I,ENSG00000079393:ENST00000478873:exon3:c.C714T:p.I238I,ENSG00000079393:ENST00000605915:exon4:c.C372T:p.I124I,ENSG00000079393:ENST00000607131:exon5:c.C585T:p.I195I,ENSG00000079393:ENST00000491677:exon7:c.C693T:p.I231I	NA	NA	10q22.2	NA	NA	NA	NA	rs3740316	0.23	0.23	0.225	0.213259	0.166	0.2649	0.2406	0.233	0.1626	0.15	0.29	0.26	0.25	0.1775	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.88966	NA	NA	0.157326	0.216069	NA	0.21	NA	5.1658406
1135	1	1647871	1647871	T	C	exonic	CDK11A,CDK11B	NA	synonymous SNV	CDK11A:NM_024011:exon5:c.A402G:p.R134R,CDK11B:NM_033486:exon5:c.A402G:p.R134R,CDK11B:NM_033492:exon5:c.A369G:p.R123R,CDK11B:NM_033493:exon5:c.A369G:p.R123R,CDK11A:NM_033529:exon5:c.A372G:p.R124R,CDK11B:NM_033488:exon6:c.A267G:p.R89R,CDK11B:NM_033489:exon6:c.A300G:p.R100R	exonic	ENSG00000008128	NA	synonymous SNV	ENSG00000008128:ENST00000356200:exon4:c.A300G:p.R100R,ENSG00000008128:ENST00000509982:exon4:c.A402G:p.R134R,ENSG00000008128:ENST00000357760:exon5:c.A372G:p.R124R,ENSG00000008128:ENST00000358779:exon5:c.A372G:p.R124R,ENSG00000008128:ENST00000378633:exon5:c.A372G:p.R124R,ENSG00000008128:ENST00000378635:exon5:c.A372G:p.R124R,ENSG00000008128:ENST00000378638:exon5:c.A300G:p.R100R,ENSG00000008128:ENST00000404249:exon5:c.A402G:p.R134R,ENSG00000008128:ENST00000460465:exon5:c.A402G:p.R134R,ENSG00000008128:ENST00000479362:exon5:c.A372G:p.R124R	NA	NA	1p36.33	NA	NA	NA	NA	rs72909014	0.5	0.5	0.33	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.501	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.029871	NA	NA	NA	NA	NA	NA	NA	5.1656666
1135	14	94464432	94464432	A	G	ncRNA_exonic	LINC00521	NA	NA	NA	ncRNA_exonic	ENSG00000175699	NA	NA	NA	NA	NA	14q32.12	NA	NA	Name=3	NA	rs733166	0.75	0.75	0.711	0.753195	0.501	0.9812	0.6787	0.8933	0.6411	0.52	0.98	0.68	0.87	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.791982	NA	NA	NA	NA	NA	0.667	NA	5.1656666
1135	20	26094567	26094567	T	C	ncRNA_exonic	NCOR1P1	NA	NA	NA	ncRNA_exonic	ENSG00000240108	NA	NA	NA	Score=565;Name=lod=263	NA	20p11.1	NA	NA	NA	NA	rs62211581	NA	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5012	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.699613	NA	1	NA	NA	NA	NA	NA	5.1654666
1135	1	100858699	100858699	T	C	intronic	CDC14A	NA	NA	NA	ncRNA_exonic	ENSG00000234332	NA	NA	NA	Score=645;Name=lod=558	NA	1p21.2	NA	NA	NA	NA	rs7513335	0.21	0.21	0.222	0.205671	0.168	0.0496	0.1081	0.4932	0.0859	0.17	0.06	0.13	0.5	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.483243	NA	NA	NA	NA	ID=COSN163169;OCCURENCE=1(NS)	0.21	NA	5.1653333
1135	2	170517591	170517591	G	A	intronic	CCDC173	NA	NA	NA	ncRNA_exonic	ENSG00000226072	NA	NA	NA	Score=619;Name=lod=438	NA	2q31.1	NA	NA	NA	NA	rs28427447	0.08	0.08	0.086	0.077476	0.168	0.0248	0.0807	0.0257	0.1063	0.15	0.02	0.09	0.04	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.621404	NA	NA	NA	NA	NA	0.101	NA	5.1653333
1135	7	71568250	71568250	T	C	intronic	CALN1	NA	NA	NA	ncRNA_exonic	ENSG00000228769	NA	NA	NA	Score=631;Name=lod=490	NA	7q11.22	NA	NA	NA	NA	rs10254309	0.35	0.35	0.344	0.372604	0.168	0.7103	0.3069	0.2156	0.4939	0.17	0.74	0.26	0.23	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.596939	NA	NA	NA	NA	NA	0.283	NA	5.1653333
1135	13	29881069	29881069	C	A	intronic	MTUS2	NA	NA	NA	ncRNA_exonic	ENSG00000223460	NA	NA	NA	Score=585;Name=lod=318	NA	13q12.3	NA	NA	NA	NA	rs2989383	0.1	0.1	0.096	0.0932508	0.168	0.003	0.0807	0.1551	0.0348	0.17	NA	0.09	0.13	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.372917	NA	NA	NA	NA	NA	0.123	NA	5.1653333
1135	21	46122331	46122331	A	C	intronic	TSPEAR	NA	NA	NA	ncRNA_exonic	ENSG00000236382	NA	NA	NA	Score=381;Name=lod=47	NA	21q22.3	NA	NA	NA	NA	rs12483477	0.17	0.17	0.13	0.171526	0.168	0.2659	0.1441	0.0401	0.2751	0.17	0.27	0.18	0.04	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.74431	NA	NA	NA	NA	NA	0.123	NA	5.1653333
1136	10	46999747	46999747	T	C	exonic	GPRIN2	NA	synonymous SNV	GPRIN2:NM_014696:exon3:c.T867C:p.H289H	exonic	ENSG00000204175	NA	synonymous SNV	ENSG00000204175:ENST00000374314:exon1:c.T867C:p.H289H,ENSG00000204175:ENST00000374317:exon3:c.T867C:p.H289H	NA	NA	10q11.22	NA	NA	NA	NA	rs3127821	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5017	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.073817	NA	NA	NA	NA	NA	0.5	NA	5.1649666
1136	3	119747919	119747919	T	C	intronic	GSK3B	NA	NA	NA	ncRNA_exonic	ENSG00000239835	NA	NA	NA	Score=561;Name=lod=253	NA	3q13.33	NA	NA	NA	NA	rs62264749	0.29	0.29	0.264	0.308706	0.169	0.4712	0.1772	0.3684	0.2975	0.17	0.48	0.19	0.33	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.800965	NA	NA	NA	NA	NA	0.225	NA	5.1643333
1136	2	231110582	231110582	C	T	exonic	SP140	NA	synonymous SNV	SP140:NM_007237:exon7:c.C669T:p.S223S	exonic	ENSG00000079263	NA	synonymous SNV	ENSG00000079263:ENST00000350136:exon7:c.C609T:p.S203S,ENSG00000079263:ENST00000392045:exon7:c.C669T:p.S223S,ENSG00000079263:ENST00000417495:exon7:c.C660T:p.S220S,ENSG00000079263:ENST00000420434:exon7:c.C669T:p.S223S	NA	NA	2q37.1	NA	NA	NA	NA	rs28445040	0.12	0.12	0.116	0.109026	0.168	0.001	0.1124	0.1142	0.1503	0.18	NA	0.14	0.14	0.151	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.542336	NA	NA	0.183607	0.109115	NA	0.116	NA	5.1640596
1136	1	24421875	24421875	C	T	intronic	MYOM3	NA	NA	NA	intronic	ENSG00000142661	NA	NA	NA	NA	NA	1p36.11	NA	Name=SRF	Name=2	NA	rs11249143	0.32	0.32	0.294	0.265775	0.4354	0.3413	0.2291	0.1558	0.1881	0.46	0.31	0.25	0.16	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.004221	NA	NA	0.400691	0.180636	NA	0.181	NA	5.163909
1136	15	78213975	78213975	T	A	ncRNA_intronic	LOC645752	NA	NA	NA	ncRNA_intronic	ENSG00000260776,ENSG00000261244	NA	NA	NA	Score=451;Name=lod=91	NA	15q24.3	NA	NA	NA	NA	rs4886970	0.39	0.39	0.367	0.345647	0.503	0.1617	0.3098	0.4486	0.2597	0.5	0.19	0.36	0.49	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.214819	NA	NA	NA	NA	NA	0.319	NA	5.1636666
1136	22	24001975	24001975	A	T	ncRNA_intronic	GUSBP11	NA	NA	NA	ncRNA_exonic	ENSG00000228315	NA	NA	NA	Score=555;Name=lod=240	NA	22q11.23	NA	NA	NA	NA	rs5751704	0.52	0.52	0.505	0.526158	0.503	0.6081	0.6023	0.3782	0.6115	0.53	0.62	0.55	0.38	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.005141	NA	NA	NA	NA	NA	0.536	NA	5.1636666
1136	16	85015541	85015541	G	A	exonic	ZDHHC7	NA	synonymous SNV	ZDHHC7:NM_017740:exon4:c.C375T:p.P125P,ZDHHC7:NM_001145548:exon5:c.C486T:p.P162P	exonic	ENSG00000153786	NA	synonymous SNV	ENSG00000153786:ENST00000566909:exon1:c.C24T:p.P8P,ENSG00000153786:ENST00000313732:exon4:c.C375T:p.P125P,ENSG00000153786:ENST00000344861:exon5:c.C486T:p.P162P,ENSG00000153786:ENST00000564466:exon5:c.C486T:p.P162P	NA	NA	16q24.1	NA	NA	NA	NA	rs16975086	0.14	0.14	0.111	0.133387	0.1571	0.1508	0.304	0.0083	0.1391	0.15	0.15	0.27	0.01	0.1753	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.954971	NA	NA	0.17093	0.037744	NA	0.159	NA	5.1633366
1136	12	19609879	19609879	C	A	intronic	AEBP2	NA	NA	NA	ncRNA_exonic	ENSG00000245205	NA	NA	NA	Score=785;Name=lod=2070	NA	12p12.3	NA	NA	NA	NA	rs12822904	0.09	0.09	0.085	0.0864617	0.17	0.0169	0.1037	0.0287	0.138	0.17	0.02	0.13	0.02	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.861705	NA	NA	NA	NA	NA	0.065	NA	5.1633333
1136	2	132274474	132274474	G	A	ncRNA_exonic	LOC150776	NA	NA	NA	ncRNA_exonic	ENSG00000152117	NA	NA	NA	NA	NA	2q21.1	NA	Name=CTCF	NA	NA	rs13010688	0.34	0.34	0.32	0.334265	0.2197	0.6796	0.4265	0.1339	0.3016	0.21	0.65	0.38	0.13	0.2838	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.794759	NA	NA	NA	NA	NA	0.29	NA	5.1631666
1136	18	47402280	47402280	A	C	intronic	MYO5B	NA	NA	NA	intronic	ENSG00000167306	NA	NA	NA	NA	NA	18q21.1	NA	Name=GATA-2	Name=2	NA	rs657424	0.88	0.88	0.88	0.883786	0.837	0.9583	0.8905	0.8313	0.9213	0.84	0.96	0.89	0.84	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.335605	NA	NA	NA	NA	NA	0.812	NA	5.163
1136	9	133761001	133761001	A	G	exonic	ABL1	NA	synonymous SNV	ABL1:NM_005157:exon11:c.A3324G:p.P1108P,ABL1:NM_007313:exon11:c.A3381G:p.P1127P	exonic	ENSG00000097007	NA	synonymous SNV	ENSG00000097007:ENST00000318560:exon11:c.A3324G:p.P1108P,ENSG00000097007:ENST00000372348:exon11:c.A3381G:p.P1127P	NA	NA	9q34.12	NA	Name=RFX5_(N-494)	NA	NA	rs1056171	0.62	0.62	0.603	0.654153	0.4881	0.5952	0.6974	0.882	0.547	0.48	0.59	0.63	0.88	0.549	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.736939	NA	NA	0.46686	0.815252	NA	0.493	NA	5.1627066
1136	10	47133816	47133816	T	A	ncRNA_exonic	HNRNPA1P33	NA	NA	NA	ncRNA_exonic	ENSG00000213412	NA	NA	NA	Score=520;Name=lod=173	NA	10q11.22	NA	NA	NA	NA	rs4307655	NA	NA	NA	0.449481	0.504	0.494	0.4885	0.3154	0.501	NA	NA	NA	NA	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.252683	1.252683	NA	NA	NA	NA	0.457	NA	5.1626666
1136	5	147486677	147486677	C	A	exonic	SPINK5	NA	synonymous SNV	SPINK5:NM_001127698:exon17:c.C1557A:p.G519G,SPINK5:NM_001127699:exon17:c.C1557A:p.G519G,SPINK5:NM_006846:exon17:c.C1557A:p.G519G	exonic	ENSG00000133710	NA	synonymous SNV	ENSG00000133710:ENST00000256084:exon17:c.C1557A:p.G519G,ENSG00000133710:ENST00000359874:exon17:c.C1557A:p.G519G,ENSG00000133710:ENST00000398454:exon17:c.C1557A:p.G519G,ENSG00000133710:ENST00000508733:exon17:c.C1500A:p.G500G	Score=476;Name=lod=115	NA	5q32	NA	NA	NA	NA	rs880687	0.43	0.43	0.385	0.429313	0.4871	0.4841	0.6167	0.1861	0.5092	0.46	0.46	0.59	0.21	0.5061	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.883922	NA	NA	0.511108	0.237778	ID=COSM149972;OCCURENCE=1(stomach)	0.362	NA	5.1623586
1136	1	152280759	152280759	A	G	exonic	FLG	NA	synonymous SNV	FLG:NM_002016:exon3:c.T6603C:p.D2201D	exonic	ENSG00000143631	NA	synonymous SNV	ENSG00000143631:ENST00000368799:exon3:c.T6603C:p.D2201D	NA	NA	1q21.3	NA	NA	NA	NA	rs2338554	0.28	0.28	0.256	0.367212	0.1531	0.4454	0.3501	0.472	0.3773	0.12	0.38	0.26	0.42	0.2416	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.457459	NA	NA	0.109884	0.387199	NA	0.181	NA	5.1620826
1136	19	40325254	40325254	G	A	intronic	FBL	NA	NA	NA	UTR3	ENSG00000105202	ENST00000595545:c.*50C>T	NA	NA	NA	NA	19q13.2	NA	Name=ZNF263	NA	NA	rs111685762	0.01	0.01	0.008	0.00858626	0.001	NA	0.0043	0.0295	NA	0.0013	NA	NA	0.03	0.0032	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.828338	NA	NA	0.00065	0.029766	NA	0.014	NA	5.1618167
1136	5	43297144	43297144	A	G	exonic	HMGCS1	NA	synonymous SNV	HMGCS1:NM_002130:exon4:c.T699C:p.Y233Y,HMGCS1:NM_001098272:exon5:c.T699C:p.Y233Y	exonic	ENSG00000112972	NA	synonymous SNV	ENSG00000112972:ENST00000433297:exon4:c.T699C:p.Y233Y,ENSG00000112972:ENST00000325110:exon5:c.T699C:p.Y233Y	Score=597;Name=lod=357	NA	5p12	NA	NA	NA	NA	rs3733769	0.37	0.37	0.337	0.354034	0.5308	0.125	0.4582	0.3124	0.3906	0.51	0.16	0.48	0.32	0.4538	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.177682	NA	NA	0.520698	0.342034	NA	0.42	NA	5.1613686
1136	11	4141132	4141132	C	A	exonic	RRM1	NA	synonymous SNV	RRM1:NM_001033:exon9:c.C850A:p.R284R	exonic	ENSG00000167325	NA	synonymous SNV	ENSG00000167325:ENST00000533495:exon3:c.C184A:p.R62R,ENSG00000167325:ENST00000534285:exon3:c.C184A:p.R62R,ENSG00000167325:ENST00000423050:exon8:c.C559A:p.R187R,ENSG00000167325:ENST00000300738:exon9:c.C850A:p.R284R	Score=582;Name=lod=308	NA	11p15.4	NA	NA	NA	NA	rs183484	0.38	0.38	0.356	0.323083	0.5229	0.378	0.4366	0.0227	0.3865	0.52	0.42	0.48	0.04	0.4489	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.600614	1.600614	NA	0.533504	0.105407	NA	0.341	NA	5.1613626
1136	1	26646726	26646726	A	G	exonic	CD52	NA	nonsynonymous SNV	CD52:NM_001803:exon2:c.A119G:p.N40S	exonic	ENSG00000169442	NA	nonsynonymous SNV	ENSG00000169442:ENST00000374213:exon2:c.A119G:p.N40S	NA	NA	1p36.11	NA	NA	NA	NA	rs1071849	0.62	0.62	0.627	0.580671	0.7356	0.4415	0.5807	0.6301	0.498	0.72	0.46	0.62	0.64	0.6711	0.77	0.53	T	0.009	B	0.007	B	0.493	N	1.000	P	.	.	1.72	T	-1.013	T	0.000	T	0.02	1.509	10.99	-1.87	-0.296	0.157	4.278	1.508807	1.508807	NA	0.765465	0.666818	ID=COSM1180632;OCCURENCE=1(upper_aerodigestive_tract)	0.652	NA	5.1611684
1136	7	99917416	99917416	G	A	exonic	SPDYE3	NA	synonymous SNV	SPDYE3:NM_001004351:exon9:c.G1575A:p.P525P	exonic	ENSG00000214300	NA	synonymous SNV	ENSG00000214300:ENST00000332397:exon9:c.G1575A:p.P525P,ENSG00000214300:ENST00000437326:exon9:c.G444A:p.P148P	NA	NA	7q22.1	NA	NA	NA	NA	rs112622797	0.08	0.08	0.062	0.0776757	0.174	0.0278	0.0879	0.0136	0.1094	0.18	0.02	0.08	0.02	0.1414	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.589901	NA	NA	0.190161	0.041761	NA	0.029	NA	5.1611056
1136	5	147481430	147481430	A	G	exonic	SPINK5	NA	synonymous SNV	SPINK5:NM_001127698:exon15:c.A1389G:p.G463G,SPINK5:NM_001127699:exon15:c.A1389G:p.G463G,SPINK5:NM_006846:exon15:c.A1389G:p.G463G	exonic	ENSG00000133710	NA	synonymous SNV	ENSG00000133710:ENST00000256084:exon15:c.A1389G:p.G463G,ENSG00000133710:ENST00000359874:exon15:c.A1389G:p.G463G,ENSG00000133710:ENST00000398454:exon15:c.A1389G:p.G463G,ENSG00000133710:ENST00000508733:exon15:c.A1332G:p.G444G	Score=450;Name=lod=90	NA	5q32	NA	NA	NA	NA	rs6896303	0.43	0.43	0.369	0.432907	0.4861	0.4851	0.6167	0.1989	0.5102	0.46	0.46	0.59	0.23	0.5076	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5686	NA	NA	0.512385	0.252643	ID=COSM149971;OCCURENCE=1(stomach)	0.362	NA	5.1605816
1136	17	39642561	39642561	T	A	UTR3	KRT36	NM_003771:c.*67A>T	NA	NA	UTR3	ENSG00000126337	ENST00000393986:c.*67A>T,ENST00000328119:c.*67A>T	NA	NA	NA	NA	17q21.2	Score=795;Name=V$MEIS1AHOXA9_01	NA	NA	NA	rs2071602	0.17	0.17	0.149	0.170727	0.173	0.2966	0.1196	0.0635	0.2198	0.18	0.29	0.14	0.07	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.257626	1.257626	NA	NA	NA	NA	0.109	NA	5.1603334
1136	18	13826837	13826837	A	C	UTR3	MC5R	NM_005913:c.*95A>C	NA	NA	UTR3	ENSG00000176136	ENST00000324750:c.*95A>C	NA	NA	NA	NA	18p11.21	NA	NA	Name=3	NA	rs11080686	0.27	0.27	0.247	0.263778	0.173	0.3433	0.3573	0.3086	0.1483	0.17	0.37	0.3	0.28	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.062458	NA	NA	NA	NA	NA	0.196	NA	5.1603334
1136	6	41773576	41773576	G	C	exonic	USP49	NA	synonymous SNV	USP49:NM_018561:exon4:c.C1146G:p.L382L	exonic	ENSG00000164663	NA	synonymous SNV	ENSG00000164663:ENST00000373009:exon1:c.C1146G:p.L382L,ENSG00000164663:ENST00000297229:exon2:c.C1146G:p.L382L,ENSG00000164663:ENST00000394253:exon3:c.C1146G:p.L382L,ENSG00000164663:ENST00000373006:exon4:c.C1146G:p.L382L,ENSG00000164663:ENST00000373010:exon6:c.C1146G:p.L382L	Score=498;Name=lod=141	NA	6p21.1	NA	NA	NA	NA	rs2185798	0.54	0.54	0.524	0.549121	0.4911	0.5407	0.6801	0.5174	0.5675	0.49	0.56	0.65	0.5	0.534	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.453956	NA	NA	0.481512	0.529278	NA	0.5	NA	5.1600546
1136	21	43342046	43342046	G	A	intronic	C2CD2	NA	NA	NA	intronic	ENSG00000157617	NA	NA	NA	NA	NA	21q22.3	NA	Name=STAT3	Name=5	NA	rs3746909	0.23	0.23	0.216	0.221046	0.2863	0.1538	0.2248	0.2095	0.2362	0.28	0.16	0.25	0.22	0.2717	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.561867	NA	NA	0.281977	0.233318	NA	0.312	NA	5.160023
1136	10	30663368	30663368	T	C	intergenic	MTPAP,MAP3K8	dist=25101;dist=59582	NA	NA	upstream	ENSG00000241621	NA	NA	NA	NA	NA	10p11.23	NA	Name=Pol2-4H8,USF-1,IRF1,TBP,Pol2,TAF1,CEBPB	Name=29	NA	rs2297039	0.46	0.46	0.457	0.446286	0.34	0.6329	0.4251	0.5219	0.2761	0.33	0.6	0.43	0.54	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.132221	NA	NA	NA	NA	NA	0.449	NA	5.16
1136	10	27035478	27035478	C	T	UTR3	PDSS1	NM_014317:c.*76C>T	NA	NA	UTR3	ENSG00000148459	ENST00000376215:c.*76C>T,ENST00000376203:c.*212C>T	NA	NA	Score=472;Name=lod=111	NA	10p12.1	NA	NA	NA	NA	rs12776877	0.1	0.1	0.074	0.0898562	0.174	0.0327	0.245	0.0091	0.0613	0.17	0.04	0.19	0.01	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.486372	4.486372	NA	NA	NA	NA	0.13	NA	5.1593334
1136	6	167115448	167115448	C	T	intronic	RPS6KA2	NA	NA	NA	ncRNA_exonic	ENSG00000235008	NA	NA	NA	Score=726;Name=lod=1195	NA	6q27	NA	NA	NA	NA	rs66759203	0.16	0.16	0.147	0.145767	0.174	0.1141	0.2003	0.1467	0.1094	0.17	0.13	0.22	0.14	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.056722	NA	NA	NA	NA	NA	0.145	NA	5.1593333
1136	14	100847707	100847707	A	G	exonic	WDR25	NA	nonsynonymous SNV	WDR25:NM_001161476:exon2:c.A446G:p.H149R,WDR25:NM_024515:exon2:c.A446G:p.H149R	exonic	ENSG00000176473	NA	nonsynonymous SNV	ENSG00000176473:ENST00000557710:exon1:c.A446G:p.H149R,ENSG00000176473:ENST00000335290:exon2:c.A446G:p.H149R,ENSG00000176473:ENST00000402312:exon2:c.A446G:p.H149R,ENSG00000176473:ENST00000554175:exon2:c.A446G:p.H149R,ENSG00000176473:ENST00000554998:exon2:c.A446G:p.H149R	NA	NA	14q32.2	NA	NA	NA	NA	rs2273800	0.59	0.59	0.591	0.646965	0.7266	0.4742	0.4597	0.6596	0.8589	0.73	0.41	0.48	0.68	0.6968	0.75	0.54	T	0.0	B	0.0	B	0.017	N	1.000	P	-0.345	N	2.32	T	-0.967	T	0.000	T	0.031	0.32	5.735	-1.17	-0.751	0.387	5.849	0.320138	NA	0.57	0.750698	0.666364	NA	0.696	NA	5.1592354
1136	8	2054066	2054066	A	G	exonic	MYOM2	NA	synonymous SNV	MYOM2:NM_003970:exon22:c.A2769G:p.Q923Q	exonic	ENSG00000036448	NA	synonymous SNV	ENSG00000036448:ENST00000523438:exon9:c.A1044G:p.Q348Q,ENSG00000036448:ENST00000262113:exon22:c.A2769G:p.Q923Q	NA	NA	8p23.3	NA	NA	NA	NA	rs17684416	0.2	0.2	0.166	0.173922	0.1799	0.2857	0.2046	0.0855	0.1503	0.18	0.29	0.24	0.08	0.1685	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.25118	NA	NA	0.15907	0.09419	NA	0.167	NA	5.1591966
1136	10	30663493	30663493	C	G	intergenic	MTPAP,MAP3K8	dist=25226;dist=59457	NA	NA	upstream	ENSG00000241621	NA	NA	NA	NA	NA	10p11.23	NA	Name=TBP,IRF1,Egr-1,CEBPB,Pol2	Name=29	NA	rs12253112	0.46	0.46	0.482	0.446685	0.341	0.6329	0.4251	0.5219	0.2771	0.33	0.6	0.43	0.54	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.56325	NA	NA	NA	NA	NA	0.449	NA	5.159
1136	7	102119322	102119322	T	C	UTR5	POLR2J	NM_006234:c.-15A>G	NA	NA	UTR5	ENSG00000005075	ENST00000292614:c.-15A>G,ENST00000393794:c.-15A>G	NA	NA	NA	NA	7q22.1	NA	Name=Sin3Ak-20,Pol2-4H8,CTCF_(SC-5916),CTCF_(C-20),HEY1,TBP,POU2F2,GABP,TAF1,SP2_(SC-643),CTCFL_(SC-98982),Pol2,Oct-2,ELF1_(SC-631),CTCF	Name=122	NA	rs1131325	0.42	0.42	0.42	0.450679	0.6362	0.3552	0.5288	0.3207	0.4785	0.53	0.33	0.49	0.32	0.5388	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.903196	NA	NA	NA	NA	NA	0.007	NA	5.1583334
1136	18	56247180	56247180	T	C	exonic	ALPK2	NA	synonymous SNV	ALPK2:NM_052947:exon4:c.A828G:p.L276L	exonic	ENSG00000198796	NA	synonymous SNV	ENSG00000198796:ENST00000361673:exon4:c.A828G:p.L276L	NA	NA	18q21.32	NA	Name=MafF_(M8194),MafK_(SC-477),HNF4G_(SC-6558),FOXA1_(SC-101058),FOXA2_(SC-6554),RXRA,p300,HNF4A_(H-171),FOXA1_(C-20),c-Jun,MafK_(ab50322)	NA	NA	rs9958735	0.5	0.5	0.475	0.510184	0.5	0.6022	0.4856	0.4289	0.5532	0.49	0.62	0.5	0.37	0.5073	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.082055	2.082055	NA	0.501163	0.436677	NA	0.399	NA	5.1582036
1136	19	58966644	58966644	A	T	exonic	ZNF324B	NA	synonymous SNV	ZNF324B:NM_207395:exon4:c.A333T:p.P111P	exonic	ENSG00000249471	NA	synonymous SNV	ENSG00000249471:ENST00000391696:exon3:c.A303T:p.P101P,ENSG00000249471:ENST00000336614:exon4:c.A333T:p.P111P,ENSG00000249471:ENST00000599193:exon4:c.A333T:p.P111P,ENSG00000249471:ENST00000599194:exon4:c.A333T:p.P111P,ENSG00000249471:ENST00000545523:exon5:c.A333T:p.P111P	NA	NA	19q13.43	NA	NA	NA	NA	rs60037165	0.15	0.15	0.116	0.128594	0.167	0.2579	0.0937	0.0083	0.1431	0.18	0.24	0.12	0.02	0.1584	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.089239	NA	NA	0.183605	0.037903	NA	0.138	NA	5.1576616
1136	3	57168273	57168273	T	C	intronic	IL17RD	NA	NA	NA	ncRNA_exonic	ENSG00000229863	NA	NA	NA	Score=770;Name=lod=1796	NA	3p14.3	NA	NA	NA	NA	rs6803905	0.39	0.39	0.399	0.381989	0.1759	0.5466	0.3963	0.4796	0.2822	0.17	0.58	0.31	0.54	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.166563	NA	NA	NA	NA	NA	0.319	NA	5.1574333
1136	5	132279016	132279016	C	T	intronic	AFF4	NA	NA	NA	ncRNA_exonic	ENSG00000235253	NA	NA	NA	Score=841;Name=lod=3504	NA	5q31.1	NA	NA	NA	NA	rs7710795	0.19	0.19	0.19	0.171326	0.1759	0.1419	0.1383	0.2874	0.0634	0.17	0.14	0.17	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.189217	NA	NA	NA	NA	NA	0.217	NA	5.1574333
1136	17	30036705	30036705	T	C	intergenic	MIR365B,COPRS	dist=134165;dist=142179	NA	NA	ncRNA_exonic	ENSG00000266448	NA	NA	NA	Score=669;Name=lod=695	NA	17q11.2	NA	Name=GABP	NA	NA	rs315495	0.92	0.92	0.938	0.944089	0.8429	0.999	0.9409	0.9962	0.9233	0.82	1	0.93	0.99	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.103916	NA	NA	NA	NA	NA	0.928	NA	5.1571
1136	16	2156447	2156447	G	A	exonic	PKD1	NA	synonymous SNV	PKD1:NM_000296:exon18:c.C7441T:p.L2481L,PKD1:NM_001009944:exon18:c.C7441T:p.L2481L	exonic	ENSG00000008710	NA	synonymous SNV	ENSG00000008710:ENST00000487932:exon4:c.C2128T:p.L710L,ENSG00000008710:ENST00000262304:exon18:c.C7441T:p.L2481L,ENSG00000008710:ENST00000423118:exon18:c.C7441T:p.L2481L	NA	NA	16p13.3	NA	NA	NA	NA	rs2003782	0.21	0.21	0.104	0.216054	0.159	NA	0.1715	0.5439	0.0859	0.16	0.01	0.2	0.51	0.2144	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.395336	NA	NA	0.136407	0.362966	NA	NA	NA	5.1568596
1136	14	70714028	70714028	C	G	ncRNA_exonic	ADAM21P1	NA	NA	NA	ncRNA_exonic	ENSG00000235812	NA	NA	NA	Score=374;Name=lod=44	NA	14q24.2	NA	NA	NA	NA	rs28597838	0.28	0.28	0.138	0.366414	0.5099	0.1647	0.5216	0.2617	0.4581	0.37	0.14	0.44	0.2	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.19228	NA	NA	NA	NA	NA	NA	NA	5.1567666
1136	7	107423254	107423254	C	T	exonic	SLC26A3	NA	synonymous SNV	SLC26A3:NM_000111:exon11:c.G1299A:p.A433A	exonic	ENSG00000091138	NA	synonymous SNV	ENSG00000091138:ENST00000340010:exon11:c.G1299A:p.A433A,ENSG00000091138:ENST00000422236:exon11:c.G1194A:p.A398A	NA	NA	7q31.1	NA	NA	NA	NA	rs3735605	0.16	0.16	0.154	0.150958	0.175	0.2758	0.1369	0.0552	0.137	0.15	0.27	0.15	0.05	0.1581	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.326426	NA	NA	0.177093	0.074444	ID=COSM1447170;OCCURENCE=1(large_intestine)	0.159	NA	5.1564736
1136	14	103128646	103128646	C	T	intronic	RCOR1	NA	NA	NA	ncRNA_exonic	ENSG00000230988	NA	NA	NA	Score=681;Name=lod=783	NA	14q32.31	NA	NA	NA	NA	rs72635192	0.25	0.25	0.231	0.251398	0.1769	0.3552	0.3285	0.2088	0.2239	0.17	0.34	0.3	0.21	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.538657	NA	NA	NA	NA	NA	0.181	NA	5.1564333
1136	14	103128751	103128751	A	G	intronic	RCOR1	NA	NA	NA	ncRNA_exonic	ENSG00000230988	NA	NA	NA	Score=681;Name=lod=783	NA	14q32.31	NA	NA	NA	NA	rs7143783	0.25	0.25	0.219	0.251597	0.1769	0.3552	0.33	0.2088	0.2239	0.17	0.34	0.3	0.21	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.309722	NA	NA	NA	NA	NA	0.181	NA	5.1564333
1136	12	109675029	109675029	T	C	exonic	ACACB	NA	synonymous SNV	ACACB:NM_001093:exon33:c.T4506C:p.L1502L	exonic	ENSG00000076555	NA	synonymous SNV	ENSG00000076555:ENST00000543201:exon6:c.T504C:p.L168L,ENSG00000076555:ENST00000377854:exon32:c.T4296C:p.L1432L,ENSG00000076555:ENST00000377848:exon33:c.T4506C:p.L1502L,ENSG00000076555:ENST00000338432:exon34:c.T4506C:p.L1502L	Score=583;Name=lod=312	NA	12q24.11	Score=867;Name=V$ELK1_02	NA	NA	NA	rs2241220	0.79	0.79	0.771	0.779153	0.8469	0.7222	0.8804	0.7262	0.7679	0.85	0.7	0.86	0.75	0.8239	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.912029	NA	NA	0.839535	0.731729	NA	0.797	NA	5.1563316
1136	3	87101877	87101877	C	A	intergenic	VGLL3,MIR4795	dist=61620;dist=173462	NA	NA	ncRNA_exonic	ENSG00000241293	NA	NA	NA	Score=568;Name=lod=271	NA	3p12.1	NA	NA	Name=5	NA	rs2575764	0.69	0.69	0.651	0.670527	0.8439	0.6736	0.8084	0.3918	0.7679	0.86	0.67	0.79	0.37	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.8227	2.8227	NA	NA	NA	NA	0.674	NA	5.1561
1136	12	55808469	55808469	C	G	intergenic	OR6C65,OR6C76	dist=13218;dist=11569	NA	NA	ncRNA_exonic	ENSG00000179899	NA	NA	NA	Score=641;Name=lod=538	NA	12q13.2	NA	NA	Name=3	NA	rs7132076	0.88	0.88	0.849	0.894569	0.8439	1	0.902	0.8094	0.9479	0.85	1	0.9	0.79	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.560316	NA	1	NA	NA	NA	0.659	NA	5.1561
1136	19	42315281	42315281	G	T	UTR3	CEACAM3	NM_001815:c.*6G>T,NM_001277163:c.*21G>T	NA	NA	UTR3	ENSG00000170956	ENST00000357396:c.*6G>T,ENST00000221999:c.*73G>T,ENST00000415495:c.*735G>T,ENST00000344550:c.*21G>T	NA	NA	NA	NA	19q13.2	NA	Name=PU.1,NFKB	Name=9	NA	rs899662	0.55	0.55	0.557	0.556909	0.3767	0.5367	0.4942	0.888	0.3599	0.38	0.56	0.43	0.87	0.4209	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.343952	NA	NA	0.37969	0.797259	NA	0.558	NA	5.1560434
1136	15	64673615	64673615	A	G	UTR5	KIAA0101	NM_014736:c.-45T>C,NM_001029989:c.-45T>C	NA	NA	UTR5	ENSG00000166803	ENST00000300035:c.-45T>C,ENST00000380258:c.-45T>C,ENST00000559519:c.-45T>C,ENST00000558008:c.-45T>C	NA	NA	NA	NA	15q22.31	NA	Name=TAF7_(SQ-8),E2F6,Pol2,NELFe,NRSF,Mxi1_(bHLH),Pol2(phosphoS2),E2F4,POU2F2,TAF1,E2F6_(H-50),ETS1,NF-YA,GTF2F1_(RAP-74),CHD2_(N-1250),NF-YB,Oct-2,Sin3Ak-20,HA-E2F1,Pol2-4H8,E2F1,TAL1_(SC-12984),Pol2(b),TBP,IRF1,p300_(N-15),USF-1,GTF2B,NFKB,HEY1	NA	NA	rs11554310	0.02	0.02	0.024	0.0329473	0.0626	0.001	0.0202	0.003	0.0849	0.06	NA	0.02	0.0041	0.0555	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.201046	NA	NA	0.059302	0.011348	NA	0.065	NA	5.1559314
1136	3	124462808	124462808	C	T	exonic	UMPS	NA	synonymous SNV	UMPS:NM_000373:exon6:c.C1320T:p.G440G	exonic	ENSG00000114491	NA	synonymous SNV	ENSG00000114491:ENST00000413078:exon3:c.C495T:p.G165G,ENSG00000114491:ENST00000538242:exon5:c.C786T:p.G262G,ENSG00000114491:ENST00000232607:exon6:c.C1320T:p.G440G,ENSG00000114491:ENST00000536109:exon7:c.C1044T:p.G348G	NA	NA	3q21.2	NA	NA	NA	NA	rs13146	0.17	0.17	0.158	0.186102	0.1511	0.1677	0.2622	0.1505	0.2352	0.14	0.19	0.24	0.15	0.1887	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.142927	NA	NA	0.171047	0.154562	NA	0.174	NA	5.1558196
1136	19	58213693	58213693	C	T	exonic	ZNF154	NA	synonymous SNV	ZNF154:NM_001085384:exon3:c.G624A:p.R208R	exonic	ENSG00000179909	NA	synonymous SNV	ENSG00000179909:ENST00000426889:exon3:c.G624A:p.R208R,ENSG00000179909:ENST00000451275:exon3:c.G624A:p.R208R,ENSG00000179909:ENST00000512439:exon3:c.G624A:p.R208R	NA	NA	19q13.43	NA	NA	NA	NA	rs61730373	0.15	0.15	0.146	0.128794	0.1948	0.0843	0.111	0.1762	0.0552	0.19	0.09	0.14	0.17	0.1507	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.790001	1.790001	NA	0.165501	0.163699	NA	0.123	NA	5.1556656
1136	8	6420490	6420490	C	G	UTR5	ANGPT2	NM_001147:c.-35G>C,NM_001118887:c.-35G>C,NM_001118888:c.-35G>C	NA	NA	UTR5	ENSG00000091879	ENST00000325203:c.-35G>C,ENST00000415216:c.-35G>C,ENST00000338312:c.-35G>C,ENST00000523120:c.-35G>C	NA	NA	NA	NA	8p23.1	NA	NA	Name=61	NA	rs3739390	0.07	0.07	0.055	0.0720847	0.0487	0.1101	0.0663	0.0514	0.089	0.05	0.1	0.09	0.05	0.0642	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.072267	NA	NA	0.065	0.057422	NA	0.022	NA	5.1554334
1136	6	32629692	32629692	G	T	intronic	HLA-DQB1	NA	NA	NA	ncRNA_intronic	ENSG00000241287	NA	NA	NA	NA	NA	6p21.32	NA	Name=Pol2-4H8	NA	NA	rs41270915	0.17	0.17	0.1	0.17512	0.1779	0.1815	0.1888	0.1989	0.1237	0.16	0.16	0.2	0.17	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.359224	NA	NA	NA	NA	NA	0.058	NA	5.1554333
1136	20	47604825	47604825	G	A	intronic	ARFGEF2	NA	NA	NA	intronic	ENSG00000124198	NA	NA	NA	NA	NA	20q13.13	NA	Name=MafK_(ab50322)	Name=2	NA	rs4810905	0.31	0.31	0.263	0.290735	0.2714	0.4812	0.3573	0.0787	0.3538	0.26	0.51	0.32	0.12	0.3062	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.860951	NA	NA	0.267093	0.121652	ID=COSN166560;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.384	NA	5.155307
1137	12	120608031	120608031	A	G	exonic	GCN1L1	NA	synonymous SNV	GCN1L1:NM_006836:exon15:c.T1461C:p.T487T	exonic	ENSG00000089154	NA	synonymous SNV	ENSG00000089154:ENST00000300648:exon15:c.T1461C:p.T487T	NA	NA	12q24.23	NA	NA	NA	NA	rs2286050	0.31	0.31	0.306	0.288938	0.1541	0.5655	0.1297	0.3101	0.227	0.16	0.58	0.15	0.34	0.2107	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.129387	NA	NA	0.147149	0.273381	NA	0.145	NA	5.1547176
1137	10	100174721	100174721	T	C	intronic	PYROXD2	NA	NA	NA	intronic	ENSG00000119943	NA	NA	NA	Score=295;Name=lod=21	NA	10q24.2	NA	NA	Name=4	NA	rs2147900	0.39	0.39	0.343	0.439896	0.2356	0.4395	0.3818	0.5809	0.501	0.22	0.46	0.36	0.57	0.3438	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.621961	1.621961	NA	0.266395	0.520654	NA	0.348	NA	5.154205
1137	15	100332799	100332799	A	C	ncRNA_exonic	DNM1P46	NA	NA	NA	ncRNA_exonic	ENSG00000182397,ENSG00000259655	NA	NA	NA	Score=500;Name=lod=143	NA	15q26.3	NA	NA	NA	NA	rs11639102	NA	NA	0.359	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5125	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.319259	NA	1	NA	NA	NA	0.181	NA	5.1541666
1137	19	46723136	46723136	T	G	ncRNA_intronic	RNU6-66P	NA	NA	NA	ncRNA_exonic	ENSG00000269637	NA	NA	NA	Score=736;Name=lod=1311	NA	19q13.32	NA	NA	NA	NA	rs11880853	0.45	0.45	0.406	0.435503	0.5129	0.5278	0.402	0.261	0.5204	0.49	0.53	0.44	0.27	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.096711	2.096711	NA	NA	NA	NA	0.304	NA	5.1537666
1137	15	51039891	51039891	T	C	intronic	SPPL2A	NA	NA	NA	ncRNA_intronic	ENSG00000259773	NA	NA	NA	NA	NA	15q21.2	NA	NA	Name=5	NA	rs17599340	0.09	0.09	0.099	0.0684904	0.1799	0.004	0.0749	0.0113	0.093	0.21	0.01	0.1	0.01	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.125574	NA	NA	NA	NA	NA	0.036	NA	5.1534333
1137	15	93339701	93339701	A	T	ncRNA_exonic	ASB9P1	NA	NA	NA	intronic	ENSG00000185442	NA	NA	NA	NA	NA	15q26.1	NA	Name=TCF4	NA	NA	rs28575385	0.26	0.26	0.272	0.274361	0.1799	0.119	0.1441	0.646	0.1217	0.17	0.12	0.17	0.62	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.342877	NA	1	NA	NA	NA	0.232	NA	5.1534333
1137	17	43552537	43552537	G	A	exonic	PLEKHM1	NA	synonymous SNV	PLEKHM1:NM_014798:exon4:c.C852T:p.C284C	exonic	ENSG00000225190	NA	synonymous SNV	ENSG00000225190:ENST00000421073:exon3:c.C585T:p.C195C,ENSG00000225190:ENST00000430334:exon4:c.C852T:p.C284C,ENSG00000225190:ENST00000581448:exon4:c.C852T:p.C284C	NA	NA	17q21.31	NA	NA	NA	NA	rs71238846	0.1	0.1	0.097	0.0822684	0.1958	0.001	0.1556	0.0378	0.0573	0.18	0.0017	0.19	0.04	0.1263	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.267721	NA	NA	0.191628	0.063777	NA	0.029	NA	5.1529386
1137	17	76419882	76419882	G	A	UTR3	DNAH17	NM_173628:c.*105C>T	NA	NA	UTR3	ENSG00000187775	ENST00000389840:c.*105C>T,ENST00000585328:c.*105C>T,ENST00000591369:c.*425C>T	NA	NA	NA	NA	17q25.3	NA	Name=STAT1	NA	NA	rs72903323	0.13	0.13	0.116	0.13139	0.1809	0.0248	0.1282	0.1694	0.1411	0.18	0.03	0.14	0.17	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.151397	NA	NA	NA	NA	NA	0.203	NA	5.1524334
1137	2	152988269	152988269	G	C	intronic	STAM2	NA	NA	NA	ncRNA_exonic	ENSG00000234272	NA	NA	NA	Score=663;Name=lod=661	NA	2q23.3	NA	NA	NA	NA	rs11684622	0.12	0.12	0.123	0.0992412	0.1809	0.0198	0.1556	0.1029	0.0521	0.18	0.03	0.18	0.09	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.265176	2.265176	NA	NA	NA	NA	0.21	NA	5.1524333
1137	3	86063391	86063391	A	G	intronic	CADM2	NA	NA	NA	ncRNA_exonic	ENSG00000243915	NA	NA	NA	Score=597;Name=lod=355	NA	3p12.1	NA	NA	NA	NA	rs9847210	0.29	0.29	0.279	0.316893	0.1809	0.3046	0.2305	0.4894	0.2975	0.17	0.32	0.23	0.48	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.499827	NA	NA	NA	NA	NA	0.319	NA	5.1524333
1137	15	27453278	27453278	G	A	intronic	GABRG3	NA	NA	NA	ncRNA_exonic	ENSG00000214254	NA	NA	NA	Score=534;Name=lod=197	NA	15q12	NA	NA	NA	NA	rs997140	0.24	0.24	0.229	0.208666	0.1809	0.3165	0.2435	0.1884	0.1288	0.18	0.34	0.24	0.21	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.010351	NA	NA	NA	NA	NA	0.123	NA	5.1524333
1137	6	39048491	39048491	A	C	exonic	GLP1R	NA	synonymous SNV	GLP1R:NM_002062:exon12:c.A1200C:p.I400I	exonic	ENSG00000112164	NA	synonymous SNV	ENSG00000112164:ENST00000373256:exon12:c.A1200C:p.I400I	Score=592;Name=lod=340	NA	6p21.2	NA	NA	NA	NA	rs1126476	0.49	0.49	0.463	0.491014	0.504	0.4593	0.5375	0.4856	0.4847	0.51	0.44	0.51	0.5	0.4997	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.922487	NA	NA	0.511628	0.517249	NA	0.58	NA	5.1513386
1137	18	48327815	48327815	G	A	exonic	MRO	NA	synonymous SNV	MRO:NM_001127176:exon5:c.C531T:p.A177A,MRO:NM_031939:exon6:c.C489T:p.A163A	exonic	ENSG00000134042	NA	synonymous SNV	ENSG00000134042:ENST00000436348:exon5:c.C531T:p.A177A,ENSG00000134042:ENST00000256425:exon6:c.C489T:p.A163A,ENSG00000134042:ENST00000398439:exon6:c.C489T:p.A163A,ENSG00000134042:ENST00000428869:exon7:c.C489T:p.A163A	Score=476;Name=lod=115	NA	18q21.2	NA	NA	NA	NA	rs2276186	0.43	0.43	0.412	0.429513	0.5239	0.3512	0.5519	0.261	0.5542	0.53	0.38	0.56	0.23	0.4941	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.263789	NA	NA	0.497558	0.307081	ID=COSM1130061;OCCURENCE=1(prostate)	0.312	NA	5.1511086
1137	15	78565478	78565478	C	T	exonic	DNAJA4	NA	synonymous SNV	DNAJA4:NM_001130182:exon3:c.C355T:p.L119L,DNAJA4:NM_001130183:exon3:c.C274T:p.L92L,DNAJA4:NM_018602:exon4:c.C442T:p.L148L	exonic	ENSG00000140403	NA	synonymous SNV	ENSG00000140403:ENST00000394852:exon3:c.C355T:p.L119L,ENSG00000140403:ENST00000446172:exon3:c.C274T:p.L92L,ENSG00000140403:ENST00000343789:exon4:c.C355T:p.L119L,ENSG00000140403:ENST00000394855:exon4:c.C442T:p.L148L,ENSG00000140403:ENST00000440911:exon4:c.C355T:p.L119L,ENSG00000140403:ENST00000483802:exon4:c.C355T:p.L119L	Score=557;Name=lod=244	NA	15q25.1	NA	NA	NA	NA	rs7163689	0.43	0.43	0.419	0.432708	0.503	0.4306	0.4251	0.3343	0.501	0.49	0.42	0.48	0.33	0.481	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.670331	NA	NA	0.531563	0.390483	NA	0.478	NA	5.1511036
1137	1	6711146	6711146	T	C	intronic	DNAJC11	NA	NA	NA	exonic	ENSG00000007923	NA	nonsynonymous SNV	ENSG00000007923:ENST00000426784:exon7:c.A725G:p.H242R	NA	NA	1p36.31	NA	NA	NA	NA	rs12145525	0.3	0.3	0.279	0.33746	0.326	0.3978	0.3242	0.1944	0.4898	0.33	0.4	0.29	0.15	0.3433	0.4	0.97	T	.	.	.	.	.	.	1.000	P	.	.	2.42	T	-0.921	T	0.000	T	0.157	-1.268	0.045	0.557	0.172	-0.330	3.441	-1.268005	NA	1	0.34656	0.195205	NA	0.319	NA	5.1508067
1137	15	25313128	25313128	A	G	downstream	SNORD116-5,SNORD116-7	NA	NA	NA	ncRNA_intronic	ENSG00000224078	NA	NA	NA	NA	NA	15q11.2	NA	Name=ZNF274	NA	NA	rs76534153	0.03	0.03	0.032	0.0403355	0.0159	NA	0.0144	0.1074	0.0348	0.02	NA	0.01	0.1	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.870684	NA	NA	NA	NA	NA	0.022	NA	5.1507666
1137	1	152277345	152277345	C	T	exonic	FLG	NA	synonymous SNV	FLG:NM_002016:exon3:c.G10017A:p.Q3339Q	exonic	ENSG00000143631	NA	synonymous SNV	ENSG00000143631:ENST00000368799:exon3:c.G10017A:p.Q3339Q	NA	NA	1q21.3	NA	NA	NA	NA	rs2065956	0.26	0.26	0.201	0.28754	0.1421	0.5823	0.3905	0.0113	0.4335	0.15	0.58	0.33	0.02	0.2293	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.488561	NA	NA	0.144651	0.036541	NA	0.152	NA	5.1506156
1137	6	167549775	167549775	T	C	exonic	CCR6	NA	synonymous SNV	CCR6:NM_004367:exon3:c.T57C:p.F19F,CCR6:NM_031409:exon3:c.T57C:p.F19F	exonic	ENSG00000112486	NA	synonymous SNV	ENSG00000112486:ENST00000341935:exon3:c.T57C:p.F19F,ENSG00000112486:ENST00000400926:exon3:c.T57C:p.F19F,ENSG00000112486:ENST00000349984:exon4:c.T57C:p.F19F	NA	NA	6q27	NA	NA	NA	NA	rs3093007	0.14	0.14	0.14	0.130791	0.1759	0.0476	0.1167	0.1778	0.1166	0.17	0.06	0.12	0.22	0.155	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.181934	NA	NA	0.185349	0.17635	NA	0.174	NA	5.1504176
1137	15	50731213	50731213	G	C	UTR5	USP8	NM_005154:c.-58G>C,NM_001128611:c.-58G>C,NM_001128610:c.-58G>C	NA	NA	UTR5	ENSG00000138592	ENST00000560297:c.-58G>C,ENST00000433963:c.-58G>C,ENST00000396444:c.-58G>C,ENST00000307179:c.-58G>C,ENST00000425032:c.-58G>C,ENST00000559329:c.-58G>C,ENST00000560730:c.-58G>C,ENST00000560982:c.-58G>C,ENST00000561211:c.-58G>C,ENST00000558091:c.-58G>C	NA	NA	NA	NA	15q21.2	Score=886;Name=V$NKX22_01	NA	NA	NA	rs11632697	0.12	0.12	0.106	0.127196	0.1839	0.002	0.2507	0.0605	0.2004	0.17	NA	0.25	0.07	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.477734	NA	NA	NA	NA	NA	0.13	NA	5.1494334
1137	8	131092026	131092026	T	A	intronic	ASAP1	NA	NA	NA	intronic	ENSG00000153317	NA	NA	NA	NA	NA	8q24.21	NA	Name=PAX5-C20,PAX5-N19,NFKB,BCL11A,MEF2A,IRF4_(M-17),BATF,EBF1_(C-8)	Name=16	NA	rs6415509	0.91	0.91	0.89	0.909545	0.8509	0.9673	0.938	0.9145	0.8834	0.84	0.97	0.94	0.9	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.335114	NA	NA	NA	NA	NA	0.819	NA	5.1491
1137	15	50759159	50759159	A	G	intronic	USP8	NA	NA	NA	ncRNA_exonic	ENSG00000242737	NA	NA	NA	Score=695;Name=lod=889	NA	15q21.2	NA	NA	NA	NA	rs11637104	0.11	0.11	0.101	0.121605	0.1849	0.002	0.2493	0.0393	0.2004	0.17	NA	0.24	0.05	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.672667	NA	NA	NA	NA	NA	0.13	NA	5.1484333
1137	10	50121784	50121784	T	C	exonic	LRRC18	NA	synonymous SNV	LRRC18:NM_001006939:exon1:c.A417G:p.T139T	exonic	ENSG00000165383	NA	synonymous SNV	ENSG00000165383:ENST00000374160:exon1:c.A417G:p.T139T,ENSG00000165383:ENST00000298124:exon2:c.A417G:p.T139T	NA	NA	10q11.23	Score=1000;Name=V$AML1_01	NA	NA	NA	rs10776653	0.54	0.54	0.601	0.6252	0.494	0.7292	0.5346	0.68	0.6431	0.47	0.65	0.51	0.55	0.531	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.304901	NA	NA	0.494419	0.629596	NA	0.507	NA	5.1472476
1137	1	1635749	1635749	C	A	exonic	CDK11A	NA	synonymous SNV	CDK11A:NM_024011:exon15:c.G1599T:p.R533R,CDK11A:NM_033529:exon15:c.G1569T:p.R523R	exonic	ENSG00000008128	NA	synonymous SNV	ENSG00000008128:ENST00000356200:exon14:c.G1497T:p.R499R,ENSG00000008128:ENST00000357760:exon15:c.G1596T:p.R532R,ENSG00000008128:ENST00000358779:exon15:c.G1569T:p.R523R,ENSG00000008128:ENST00000378633:exon15:c.G1608T:p.R536R,ENSG00000008128:ENST00000378638:exon15:c.G1497T:p.R499R,ENSG00000008128:ENST00000404249:exon15:c.G1599T:p.R533R	Score=561;Name=lod=255	NA	1p36.33	NA	NA	NA	NA	rs1136997	0.34	0.34	0.286	0.397564	0.5368	0.252	0.4553	0.407	0.3507	0.44	0.21	0.4	0.33	0.4717	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.159021	NA	NA	0.511034	0.389633	NA	0.254	NA	5.1471326
1137	17	37234111	37234111	G	A	ncRNA_intronic	LOC100131347	NA	NA	NA	ncRNA_intronic	ENSG00000263818	NA	NA	NA	NA	NA	17q12	NA	Name=CTCF	NA	NA	rs3744078	0.45	0.45	0.423	0.483027	0.5199	0.4107	0.6484	0.3321	0.6063	0.52	0.39	0.59	0.32	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.005847	NA	NA	NA	NA	NA	0.478	NA	5.1467666
1137	4	25005193	25005193	G	A	exonic	LGI2	NA	synonymous SNV	LGI2:NM_018176:exon8:c.C1518T:p.Y506Y	exonic	ENSG00000153012	NA	synonymous SNV	ENSG00000153012:ENST00000382114:exon8:c.C1518T:p.Y506Y	Score=483;Name=lod=123	NA	4p15.2	NA	NA	NA	NA	rs2232028	0.73	0.73	0.777	0.765775	0.4632	0.9742	0.6455	0.9115	0.7505	0.48	0.97	0.6	0.92	0.6006	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.155661	NA	NA	0.456279	0.844076	NA	0.667	NA	5.1465876
1137	16	84228873	84228873	C	T	exonic	ADAD2	NA	synonymous SNV	ADAD2:NM_139174:exon6:c.C951T:p.G317G	exonic	ENSG00000140955	NA	synonymous SNV	ENSG00000140955:ENST00000268624:exon6:c.C951T:p.G317G	NA	NA	16q24.1	NA	NA	NA	NA	rs11865115	0.13	0.13	0.11	0.100839	0.1978	0.1161	0.1225	0.0469	0.0429	0.2	0.11	0.15	0.05	0.1422	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.407983	NA	NA	0.180098	0.060641	NA	0.109	NA	5.1465686
1137	5	76586994	76586994	G	A	intronic	PDE8B	NA	NA	NA	ncRNA_exonic	ENSG00000251400	NA	NA	NA	Score=812;Name=lod=2659	NA	5q13.3	NA	NA	NA	NA	rs251412	0.12	0.12	0.125	0.108227	0.1869	0.0268	0.1527	0.0764	0.1227	0.19	0.04	0.19	0.08	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.365116	NA	NA	NA	NA	NA	0.094	NA	5.1464333
1137	8	68968171	68968171	G	A	exonic	PREX2	NA	synonymous SNV	PREX2:NM_024870:exon10:c.G1200A:p.K400K,PREX2:NM_025170:exon10:c.G1200A:p.K400K	exonic	ENSG00000046889	NA	synonymous SNV	ENSG00000046889:ENST00000288368:exon10:c.G1200A:p.K400K	Score=680;Name=lod=773	NA	8q13.2	NA	NA	NA	NA	rs1434775	0.53	0.53	0.528	0.561701	0.5239	0.2688	0.4755	0.8865	0.5245	0.53	0.28	0.48	0.86	0.5064	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.26214	1.26214	NA	0.490116	0.82138	NA	0.623	NA	5.1462506
1137	4	100266371	100266371	A	G	exonic	ADH1C	NA	unknown	UNKNOWN	exonic	ENSG00000248144	NA	unknown	UNKNOWN	Score=340;Name=lod=32	NA	4q23	NA	NA	NA	NA	rs1789915	0.17	0.17	0.153	0.15016	0.3151	0.0248	0.1686	0.093	0.1738	0.32	0.01	0.18	0.12	0.2454	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.910036	NA	NA	0.293256	0.118128	NA	0.188	NA	5.146244
1137	14	21967916	21967916	A	G	exonic	METTL3	NA	synonymous SNV	METTL3:NM_019852:exon7:c.T1335C:p.N445N	exonic	ENSG00000165819	NA	synonymous SNV	ENSG00000165819:ENST00000298717:exon7:c.T1335C:p.N445N	Score=588;Name=lod=328	NA	14q11.2	NA	NA	NA	NA	rs1139130	0.51	0.51	0.485	0.511981	0.5	0.3542	0.6282	0.5749	0.5194	0.52	0.35	0.6	0.59	0.5179	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.611639	NA	NA	0.50314	0.531094	NA	0.471	NA	5.1456266
1137	9	126134542	126134542	G	A	exonic	CRB2	NA	synonymous SNV	CRB2:NM_173689:exon9:c.G2523A:p.T841T	exonic	ENSG00000148204	NA	synonymous SNV	ENSG00000148204:ENST00000373629:exon4:c.G1527A:p.T509T,ENSG00000148204:ENST00000460253:exon4:c.G1527A:p.T509T,ENSG00000148204:ENST00000359999:exon9:c.G2523A:p.T841T,ENSG00000148204:ENST00000373631:exon9:c.G2523A:p.T841T	NA	NA	9q33.3	Score=861;Name=V$HEN1_01	NA	NA	NA	rs61740213	0.37	0.37	0.335	0.329073	0.5298	0.377	0.3963	0.0658	0.3814	0.54	0.34	0.44	0.08	0.4466	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.226621	NA	NA	0.544651	0.121425	NA	0.29	NA	5.1456156
1137	11	5602679	5602679	T	C	exonic	OR52B6	NA	synonymous SNV	OR52B6:NM_001005162:exon1:c.T573C:p.N191N	exonic	ENSG00000187747	NA	synonymous SNV	ENSG00000187747:ENST00000345043:exon1:c.T573C:p.N191N	NA	NA	11p15.4	Score=904;Name=V$CDPCR3HD_01	NA	NA	NA	rs892336	0.69	0.69	0.702	0.716454	0.4761	0.9792	0.67	0.7413	0.6922	0.47	0.97	0.63	0.72	0.5744	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.132438	NA	NA	0.470684	0.703204	NA	0.623	NA	5.1454826
1137	13	111980537	111980537	C	T	exonic	TEX29	NA	synonymous SNV	TEX29:NM_152324:exon3:c.C66T:p.D22D	exonic	ENSG00000153495	NA	synonymous SNV	ENSG00000153495:ENST00000283547:exon3:c.C66T:p.D22D,ENSG00000153495:ENST00000497241:exon3:c.C147T:p.D49D	Score=443;Name=lod=84	NA	13q34	NA	NA	NA	NA	rs1359428	0.53	0.53	0.501	0.541733	0.492	0.7927	0.6585	0.2466	0.6503	0.5	0.75	0.6	0.26	0.5416	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.935499	NA	NA	0.487791	0.290967	NA	0.507	NA	5.1452756
1138	11	4159457	4159457	A	G	exonic	RRM1	NA	synonymous SNV	RRM1:NM_001033:exon19:c.A2223G:p.T741T	exonic	ENSG00000167325	NA	synonymous SNV	ENSG00000167325:ENST00000534285:exon13:c.A1557G:p.T519T,ENSG00000167325:ENST00000537197:exon13:c.A1209G:p.T403T,ENSG00000167325:ENST00000423050:exon18:c.A1932G:p.T644T,ENSG00000167325:ENST00000300738:exon19:c.A2223G:p.T741T	Score=639;Name=lod=525	NA	11p15.4	NA	NA	NA	NA	rs9937	0.4	0.4	0.359	0.344649	0.5239	0.3819	0.4424	0.0953	0.3896	0.52	0.42	0.49	0.13	0.4614	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.720791	2.720791	NA	0.536529	0.166515	NA	0.312	NA	5.1448376
1138	14	77926011	77926011	C	T	exonic	AHSA1	NA	synonymous SNV	AHSA1:NM_012111:exon2:c.C133T:p.L45L	exonic	ENSG00000100591	NA	synonymous SNV	ENSG00000100591:ENST00000216479:exon2:c.C133T:p.L45L,ENSG00000100591:ENST00000535854:exon2:c.C133T:p.L45L,ENSG00000100591:ENST00000555517:exon2:c.C133T:p.L45L	Score=383;Name=lod=48	NA	14q24.3	NA	NA	NA	NA	rs1061629	0.51	0.51	0.488	0.474441	0.4901	0.9236	0.5144	0.0688	0.5153	0.49	0.93	0.46	0.08	0.5092	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.388669	1.388669	NA	0.522558	0.145937	NA	0.377	NA	5.1448086
1138	6	130761804	130761804	C	T	exonic	TMEM200A	NA	synonymous SNV	TMEM200A:NM_001258276:exon2:c.C237T:p.A79A,TMEM200A:NM_001258278:exon2:c.C237T:p.A79A,TMEM200A:NM_052913:exon2:c.C237T:p.A79A,TMEM200A:NM_001258277:exon3:c.C237T:p.A79A	exonic	ENSG00000164484	NA	synonymous SNV	ENSG00000164484:ENST00000392429:exon2:c.C237T:p.A79A,ENSG00000164484:ENST00000545622:exon2:c.C237T:p.A79A,ENSG00000164484:ENST00000296978:exon3:c.C237T:p.A79A	NA	NA	6q23.1	NA	NA	NA	NA	rs12200105	0.25	0.25	0.239	0.261981	0.172	0.1339	0.2248	0.5408	0.136	0.18	0.09	0.23	0.54	0.1895	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.457896	NA	NA	0.160698	0.455742	NA	0.275	NA	5.1444686
1138	2	132201468	132201468	G	A	ncRNA_exonic	LOC401010	NA	NA	NA	ncRNA_exonic	ENSG00000217950	NA	NA	NA	Score=614;Name=lod=417	NA	2q21.1	NA	NA	NA	NA	rs4522649	0.36	0.36	0.291	0.351637	0.2286	0.7579	0.5086	0.084	0.3098	0.22	0.73	0.43	0.11	0.2936	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.494104	NA	NA	NA	NA	NA	0.232	NA	5.1444666
1138	6	133046003	133046003	G	A	ncRNA_exonic	VNN3	NA	NA	NA	exonic	ENSG00000093134	NA	synonymous SNV	ENSG00000093134:ENST00000207771:exon6:c.C942T:p.Y314Y	NA	NA	6q23.2	NA	NA	NA	NA	rs45513492	0.0046	0.0046	NA	0.00139776	0.006	NA	0.0014	NA	NA	0.01	NA	0.0028	0.002	0.0053	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.606897	1.606897	NA	0.01105	0.001142	NA	NA	NA	5.1443166
1138	1	236647511	236647511	T	C	UTR3	EDARADD	NM_145861:c.*1562T>C,NM_080738:c.*1562T>C	NA	NA	ncRNA_exonic	ENSG00000244457	NA	NA	NA	Score=795;Name=lod=2274	NA	1q43	NA	NA	NA	NA	rs7513402	0.26	0.26	0.245	0.253994	0.3559	0.0952	0.3285	0.202	0.3303	0.36	0.1	0.32	0.23	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.898132	NA	NA	NA	NA	NA	0.333	NA	5.1441
1138	4	155219361	155219361	A	G	exonic	DCHS2	NA	synonymous SNV	DCHS2:NM_017639:exon18:c.T4740C:p.D1580D	exonic	ENSG00000197410	NA	synonymous SNV	ENSG00000197410:ENST00000357232:exon18:c.T4740C:p.D1580D	NA	NA	4q31.3	NA	NA	NA	NA	rs17031387	0.15	0.15	0.133	0.172324	0.174	0.1528	0.1138	0.1687	0.2372	0.16	0.13	0.15	0.15	0.1723	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.481606	NA	NA	0.176628	0.182478	NA	0.13	NA	5.1437386
1138	1	26644698	26644698	C	T	UTR5	UBXN11	NM_145345:c.-15324G>A	NA	NA	UTR5	ENSG00000158062	ENST00000374217:c.-15324G>A,ENST00000374222:c.-15324G>A	NA	NA	NA	NA	1p36.11	NA	NA	Name=2	NA	rs12090258	0.13	0.13	0.118	0.123802	0.1899	0.0218	0.1066	0.1838	0.092	0.2	0.02	0.11	0.15	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.104398	NA	NA	NA	NA	NA	0.094	NA	5.1434334
1138	16	1657012	1657012	C	T	intronic	IFT140	NA	NA	NA	ncRNA_intronic	ENSG00000260989	NA	NA	NA	NA	NA	16p13.3	NA	Name=BCL3	NA	NA	rs7192480	0.27	0.27	0.271	0.285743	0.1899	0.3681	0.1455	0.3343	0.3333	0.2	0.36	0.17	0.35	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.285446	NA	NA	NA	NA	ID=COSN165086;OCCURENCE=1(NS),1(haematopoietic_and_lymphoid_tissue),1(urinary_tract),2(lung),1(large_intestine)	0.254	NA	5.1434333
1138	12	30823971	30823971	A	G	exonic	IPO8	NA	synonymous SNV	IPO8:NM_001190995:exon5:c.T354C:p.L118L,IPO8:NM_006390:exon9:c.T969C:p.L323L	exonic	ENSG00000133704	NA	synonymous SNV	ENSG00000133704:ENST00000542464:exon5:c.T411C:p.L137L,ENSG00000133704:ENST00000544829:exon5:c.T354C:p.L118L,ENSG00000133704:ENST00000256079:exon9:c.T969C:p.L323L	Score=471;Name=lod=109	NA	12p11.21	NA	NA	NA	NA	rs1054426	0.49	0.49	0.517	0.49401	0.5089	0.4484	0.2911	0.702	0.3885	0.52	0.45	0.29	0.64	0.4974	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.113305	NA	NA	0.517326	0.658647	NA	0.384	NA	5.1430406
1138	1	26589636	26589636	A	G	intronic	CEP85	NA	NA	NA	ncRNA_exonic	ENSG00000270733	NA	NA	NA	Score=295;Name=lod=21	NA	1p36.11	NA	NA	NA	NA	rs12141563	0.13	0.13	0.119	0.132188	0.1909	0.0228	0.1066	0.2027	0.1074	0.21	0.02	0.11	0.16	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3245	NA	NA	NA	NA	NA	0.094	NA	5.1424333
1138	7	29252677	29252677	C	T	intronic	CHN2	NA	NA	NA	ncRNA_exonic	ENSG00000237065	NA	NA	NA	NA	NA	7p14.3	NA	Name=GR	NA	NA	rs113419286	0.1	0.1	0.056	0.0780751	0.1909	0.0188	0.1542	0.0348	0.0276	0.19	0.01	0.15	0.02	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.293785	NA	NA	NA	NA	NA	0.043	NA	5.1424333
1138	9	39154310	39154310	T	C	intronic	CNTNAP3	NA	NA	NA	ncRNA_exonic	ENSG00000226625	NA	NA	NA	Score=611;Name=lod=406	NA	9p13.1	NA	NA	NA	NA	rs75922711	0.14	0.14	0.135	0.122404	0.1909	0.1984	0.0836	0.0136	0.1483	0.21	0.18	0.1	0.02	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.284444	NA	NA	NA	NA	NA	0.109	NA	5.1424333
1138	14	36235586	36235586	G	A	intronic	RALGAPA1	NA	NA	NA	ncRNA_exonic	ENSG00000257957	NA	NA	NA	Score=662;Name=lod=654	NA	14q13.2	NA	NA	NA	NA	rs10129696	0.44	0.44	0.467	0.473243	0.1909	0.5784	0.2277	0.7557	0.4479	0.19	0.61	0.29	0.72	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.281766	NA	NA	NA	NA	NA	0.399	NA	5.1424333
1138	15	91178310	91178310	C	T	intronic	CRTC3	NA	NA	NA	ncRNA_intronic	ENSG00000259736	NA	NA	NA	Score=483;Name=lod=123	NA	15q26.1	NA	NA	NA	NA	rs57373970	0.18	0.18	0.132	0.201877	0.1909	0.2093	0.1196	0.2746	0.1656	0.19	0.15	0.13	0.26	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.715436	2.715436	NA	NA	NA	NA	0.109	NA	5.1424333
1138	2	38302544	38302544	G	A	intronic	CYP1B1	NA	NA	NA	intronic	ENSG00000138061	NA	NA	NA	NA	NA	2p22.2	NA	Name=Pol2,Pol2-4H8	Name=85	NA	rs2617266	0.26	0.26	0.232	0.294129	0.2853	0.1806	0.2839	0.2821	0.4438	0.3	0.18	0.26	0.3	0.2993	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.145678	NA	NA	0.27314	0.257156	NA	0.254	NA	5.14226
1138	20	30919183	30919183	A	G	UTR3	KIF3B	NM_004798:c.*61A>G	NA	NA	UTR3	ENSG00000101350	ENST00000375712:c.*61A>G,ENST00000418717:c.*61A>G	NA	NA	Score=412;Name=lod=63	NA	20q11.21	NA	NA	NA	NA	rs1029116	0.3	0.3	0.292	0.285743	0.1918	0.251	0.268	0.5333	0.0961	0.18	0.26	0.3	0.51	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.015364	NA	NA	NA	NA	NA	0.457	NA	5.1415334
1138	1	207739127	207739127	A	G	intronic	CR1	NA	NA	NA	ncRNA_intronic	ENSG00000236911	NA	NA	NA	NA	NA	1q32.2	NA	Name=CTCF_(SC-5916),CTCF,Rad21	Name=25	NA	rs3886100	0.44	0.44	0.393	0.391573	0.5974	0.3552	0.5706	0.146	0.4223	0.58	0.42	0.56	0.17	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.546714	NA	NA	0.594654	0.2125	NA	0.268	NA	5.1412793
1138	2	29449819	29449819	C	T	exonic	ALK	NA	synonymous SNV	ALK:NM_004304:exon18:c.G3036A:p.T1012T	exonic	ENSG00000171094	NA	synonymous SNV	ENSG00000171094:ENST00000389048:exon18:c.G3036A:p.T1012T	NA	NA	2p23.2	NA	NA	NA	NA	rs2293563	0.18	0.18	0.182	0.169928	0.1928	0.119	0.147	0.2277	0.137	0.17	0.13	0.16	0.25	0.1591	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.258678	NA	NA	0.173488	0.221062	ID=COSM148824;OCCURENCE=1(stomach)	0.203	NA	5.1412786
1138	14	20859205	20859205	C	T	exonic	TEP1	NA	synonymous SNV	TEP1:NM_007110:exon14:c.G2148A:p.A716A	exonic	ENSG00000129566	NA	synonymous SNV	ENSG00000129566:ENST00000555008:exon2:c.G198A:p.A66A,ENSG00000129566:ENST00000556935:exon12:c.G1824A:p.A608A,ENSG00000129566:ENST00000262715:exon14:c.G2148A:p.A716A,ENSG00000129566:ENST00000555727:exon14:c.G2148A:p.A716A	NA	NA	14q11.2	NA	NA	NA	NA	rs872074	0.15	0.15	0.163	0.160144	0.1819	0.0317	0.1297	0.2685	0.1452	0.18	0.04	0.12	0.28	0.168	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.913489	NA	NA	0.176163	0.241943	ID=COSM330302;OCCURENCE=1(haematopoietic_and_lymphoid_tissue),1(large_intestine)	0.101	NA	5.1406036
1138	11	61404336	61404336	G	A	ncRNA_exonic	RPLP0P2	NA	NA	NA	ncRNA_exonic	ENSG00000243742	NA	NA	NA	Score=806;Name=lod=2526	NA	11q12.2	NA	NA	NA	NA	rs17626916	0.15	0.15	0.133	0.139177	0.2913	0.0208	0.2017	0.0439	0.1892	0.28	0.02	0.23	0.04	0.2348	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.268646	NA	NA	NA	NA	NA	0.174	NA	5.1405666
1138	1	241907817	241907817	T	C	exonic	WDR64	NA	synonymous SNV	WDR64:NM_144625:exon12:c.T1563C:p.N521N	exonic	ENSG00000162843	NA	synonymous SNV	ENSG00000162843:ENST00000472717:exon2:c.T240C:p.N80N,ENSG00000162843:ENST00000414635:exon7:c.T876C:p.N292N,ENSG00000162843:ENST00000366552:exon12:c.T1563C:p.N521N,ENSG00000162843:ENST00000437684:exon12:c.T1563C:p.N521N	Score=441;Name=lod=83	NA	1q43	NA	NA	NA	NA	rs10802990	0.56	0.56	0.568	0.590855	0.4672	0.5149	0.572	0.8185	0.502	0.44	0.54	0.52	0.78	0.5354	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.455505	NA	NA	0.523605	0.774172	NA	0.659	NA	5.1404616
1138	7	128607384	128607384	G	A	exonic	TNPO3	NA	synonymous SNV	TNPO3:NM_001191028:exon20:c.C2469T:p.A823A,TNPO3:NM_012470:exon21:c.C2661T:p.A887A	exonic	ENSG00000064419	NA	synonymous SNV	ENSG00000064419:ENST00000471234:exon20:c.C2469T:p.A823A,ENSG00000064419:ENST00000265388:exon21:c.C2661T:p.A887A,ENSG00000064419:ENST00000393245:exon21:c.C2763T:p.A921A,ENSG00000064419:ENST00000471166:exon21:c.C2763T:p.A921A,ENSG00000064419:ENST00000482320:exon22:c.C2463T:p.A821A	NA	NA	7q32.1	Score=924;Name=V$TGIF_01	NA	NA	NA	rs8043	0.48	0.48	0.5	0.476837	0.5318	0.4425	0.366	0.5061	0.4949	0.53	0.45	0.38	0.49	0.4779	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.379941	1.379941	NA	0.516628	0.498865	NA	0.471	NA	5.1403386
1138	9	14859356	14859356	T	C	exonic	FREM1	NA	synonymous SNV	FREM1:NM_144966:exon5:c.A456G:p.Q152Q	exonic	ENSG00000164946	NA	synonymous SNV	ENSG00000164946:ENST00000380880:exon4:c.A456G:p.Q152Q,ENSG00000164946:ENST00000380875:exon5:c.A456G:p.Q152Q,ENSG00000164946:ENST00000380881:exon5:c.A456G:p.Q152Q,ENSG00000164946:ENST00000422223:exon5:c.A456G:p.Q152Q	NA	NA	9p22.3	NA	NA	NA	NA	rs10961757	0.27	0.27	0.252	0.248403	0.164	0.5367	0.2435	0.1483	0.1769	0.17	0.52	0.24	0.15	0.21	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.404054	NA	NA	0.152643	0.146656	NA	0.225	NA	5.1400236
1138	1	65858145	65858145	G	A	exonic	DNAJC6	NA	synonymous SNV	DNAJC6:NM_001256864:exon12:c.G1500A:p.E500E,DNAJC6:NM_014787:exon12:c.G1329A:p.E443E,DNAJC6:NM_001256865:exon13:c.G1290A:p.E430E	exonic	ENSG00000116675	NA	synonymous SNV	ENSG00000116675:ENST00000371069:exon12:c.G1500A:p.E500E,ENSG00000116675:ENST00000395325:exon12:c.G1329A:p.E443E,ENSG00000116675:ENST00000494710:exon12:c.G1422A:p.E474E,ENSG00000116675:ENST00000263441:exon13:c.G1290A:p.E430E	Score=401;Name=lod=57	NA	1p31.3	NA	NA	NA	NA	rs4325172	0.36	0.36	0.342	0.354034	0.5338	0.1885	0.4323	0.2784	0.3865	0.52	0.17	0.46	0.27	0.459	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.899088	NA	NA	0.533953	0.320472	NA	0.391	NA	5.1399136
1138	9	117122202	117122202	C	T	exonic	AKNA	NA	synonymous SNV	AKNA:NM_030767:exon10:c.G2265A:p.E755E	exonic	ENSG00000106948	NA	synonymous SNV	ENSG00000106948:ENST00000374075:exon8:c.G2022A:p.E674E,ENSG00000106948:ENST00000223791:exon9:c.G645A:p.E215E,ENSG00000106948:ENST00000307564:exon10:c.G2265A:p.E755E,ENSG00000106948:ENST00000312033:exon10:c.G2265A:p.E755E,ENSG00000106948:ENST00000374088:exon10:c.G2265A:p.E755E	Score=265;Name=lod=16	NA	9q32	NA	NA	NA	NA	rs3748177	0.39	0.39	0.363	0.389976	0.508	0.3869	0.4769	0.1339	0.5562	0.51	0.38	0.49	0.12	0.4867	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.173355	NA	NA	0.532326	0.196777	ID=COSM150684;OCCURENCE=1(stomach),1(prostate)	0.493	NA	5.1396406
1138	12	120591143	120591143	A	G	exonic	GCN1L1	NA	synonymous SNV	GCN1L1:NM_006836:exon33:c.T3936C:p.Y1312Y	exonic	ENSG00000089154	NA	synonymous SNV	ENSG00000089154:ENST00000300648:exon33:c.T3936C:p.Y1312Y	NA	NA	12q24.23	NA	NA	NA	NA	rs12312562	0.35	0.35	0.347	0.341853	0.1551	0.5546	0.1441	0.5053	0.2342	0.16	0.56	0.17	0.52	0.2237	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.718952	NA	NA	0.149087	0.417932	ID=COSM1359333;OCCURENCE=1(large_intestine)	0.225	NA	5.1387796
1138	17	39406409	39406409	C	A	exonic	KRTAP9-4	NA	nonsynonymous SNV	KRTAP9-4:NM_033191:exon1:c.C437A:p.S146Y	exonic	ENSG00000241595	NA	nonsynonymous SNV	ENSG00000241595:ENST00000334109:exon1:c.C437A:p.S146Y	NA	NA	17q21.2	NA	NA	NA	NA	rs2191379	0.67	0.67	0.635	0.675919	0.7336	0.631	0.8012	0.5053	0.8047	0.73	0.64	0.78	0.52	0.7369	0.78	0.17	T	0.339	B	0.093	B	.	.	1.000	P	1.24	L	5.3	T	-1.137	T	0.000	T	0.182	1.429	10.72	1.38	0.535	-0.100	4.338	1.429114	1.429114	0.04	0.724186	0.5202	NA	0.13	NA	5.1386474
1138	12	69593883	69593883	A	G	intergenic	CPM,CPSF6	dist=236863;dist=39434	NA	NA	intergenic	ENSG00000252547,ENSG00000258140	dist=82451;dist=12020	NA	NA	NA	NA	12q15	NA	Name=SETDB1,KAP1	Name=3	NA	rs12302044	0.13	0.13	0.114	0.14377	0.1948	0.1518	0.1254	0.0643	0.2035	0.18	0.13	0.13	0.07	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.648554	NA	NA	NA	NA	NA	0.123	NA	5.1385334
1138	14	103878949	103878949	C	T	intronic	MARK3	NA	NA	NA	ncRNA_exonic	ENSG00000244691	NA	NA	NA	Score=568;Name=lod=271	NA	14q32.32	NA	NA	NA	NA	rs4900573	0.21	0.21	0.151	0.229233	0.1948	0.4375	0.2061	0.0061	0.3681	0.18	0.44	0.2	0.01	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.12773	NA	NA	NA	NA	NA	0.159	NA	5.1385333
1138	X	2408437	2408437	G	A	exonic	ZBED1	NA	synonymous SNV	ZBED1:NM_001171135:exon2:c.C324T:p.D108D,ZBED1:NM_001171136:exon2:c.C324T:p.D108D,ZBED1:NM_004729:exon2:c.C324T:p.D108D	exonic	ENSG00000214717	NA	synonymous SNV	ENSG00000214717:ENST00000381218:exon2:c.C324T:p.D108D,ENSG00000214717:ENST00000381222:exon2:c.C324T:p.D108D,ENSG00000214717:ENST00000381223:exon2:c.C324T:p.D108D,ENSG00000214717:ENST00000461691:exon2:c.C324T:p.D108D	NA	NA	Xp22.33	NA	NA	NA	NA	rs3752331	0.19	0.19	0.1876	NA	NA	NA	NA	NA	NA	0.27	0.2	0.16	0.07	0.2472	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.772975	NA	NA	0.281774	0.105084	ID=COSM1319460;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.116	NA	5.1376926
1138	11	61405104	61405104	T	G	ncRNA_exonic	RPLP0P2	NA	NA	NA	ncRNA_exonic	ENSG00000243742	NA	NA	NA	Score=806;Name=lod=2526	NA	11q12.2	NA	NA	NA	NA	rs12281961	0.15	0.15	0.123	0.142772	0.2883	0.0208	0.2046	0.0567	0.1912	0.28	0.02	0.24	0.05	0.2408	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.303165	NA	NA	NA	NA	NA	0.174	NA	5.1375666
1138	1	33957130	33957130	C	A	exonic	ZSCAN20	NA	synonymous SNV	ZSCAN20:NM_145238:exon6:c.C1272A:p.A424A	exonic	ENSG00000121903	NA	synonymous SNV	ENSG00000121903:ENST00000373413:exon4:c.C1110A:p.A370A,ENSG00000121903:ENST00000361328:exon6:c.C1272A:p.A424A	NA	NA	1p35.1	NA	NA	NA	NA	rs3795419	0.18	0.18	0.144	0.194489	0.162	0.3651	0.2104	0.0204	0.2761	0.16	0.35	0.17	0.03	0.1951	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.835201	NA	NA	0.172197	0.04529	ID=COSM146460;OCCURENCE=1(stomach)	0.094	NA	5.1373696
1138	5	14960648	14960648	A	G	intergenic	ANKH,FBXL7	dist=88761;dist=539657	NA	NA	ncRNA_exonic	ENSG00000250247	NA	NA	NA	Score=801;Name=lod=2389	NA	5p15.2	NA	Name=CEBPB	NA	NA	rs835111	0.83	0.83	0.821	0.827676	0.8628	0.8155	0.9006	0.7489	0.8589	0.87	0.81	0.9	0.76	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.368394	1.368394	NA	NA	NA	NA	0.775	NA	5.1372
1138	6	158499302	158499302	G	T	exonic	SYNJ2	NA	synonymous SNV	SYNJ2:NM_001178088:exon17:c.G1845T:p.A615A,SYNJ2:NM_003898:exon18:c.G2556T:p.A852A	exonic	ENSG00000078269	NA	synonymous SNV	ENSG00000078269:ENST00000355585:exon18:c.G2556T:p.A852A,ENSG00000078269:ENST00000367121:exon18:c.G2556T:p.A852A,ENSG00000078269:ENST00000367122:exon18:c.G2556T:p.A852A	Score=458;Name=lod=97	NA	6q25.3	NA	NA	NA	NA	rs2296507	0.55	0.55	0.584	0.552915	0.5099	0.5833	0.353	0.6732	0.545	0.53	0.54	0.39	0.71	0.5104	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.878044	NA	NA	0.509535	0.640036	NA	0.58	NA	5.1368316
1138	2	174094345	174094345	A	T	ncRNA_intronic	MLK7-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000238133	NA	NA	NA	NA	NA	2q31.1	NA	NA	Name=3	NA	rs10193498	0.42	0.42	0.445	0.397165	0.2654	0.625	0.3674	0.447	0.2515	0.25	0.62	0.39	0.5	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.833275	NA	NA	0.264613	0.405347	NA	0.384	NA	5.1366536
1138	21	47420723	47420723	G	C	intronic	COL6A1	NA	NA	NA	intronic	ENSG00000142156	NA	NA	NA	NA	NA	21q22.3	NA	NA	Name=22	NA	rs13053065	0.28	0.28	0.23	0.265974	0.2704	0.1359	0.2795	0.4039	0.1994	0.27	0.15	0.3	0.41	0.2839	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.109824	NA	NA	0.309302	0.388334	NA	0.13	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000079768.1;CLNDSDB=.;CLNDSDBID=.	5.136398
1138	9	136505114	136505114	A	G	exonic	DBH	NA	synonymous SNV	DBH:NM_000787:exon2:c.A486G:p.E162E	exonic	ENSG00000123454	NA	synonymous SNV	ENSG00000123454:ENST00000393056:exon2:c.A486G:p.E162E	Score=464;Name=lod=103	NA	9q34.2	NA	NA	NA	NA	rs1108580	0.44	0.44	0.453	0.429912	0.5368	0.122	0.3963	0.6823	0.32	0.53	0.14	0.42	0.66	0.4599	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.913514	1.913514	NA	0.533605	0.650477	ID=COSM1460845;OCCURENCE=1(large_intestine)	0.543	NA	5.1363616
1138	10	17024615	17024615	A	T	exonic	CUBN	NA	synonymous SNV	CUBN:NM_001081:exon31:c.T4563A:p.I1521I	exonic	ENSG00000107611	NA	synonymous SNV	ENSG00000107611:ENST00000438254:exon2:c.T129A:p.I43I,ENSG00000107611:ENST00000377833:exon31:c.T4563A:p.I1521I	Score=515;Name=lod=165	NA	10p13	NA	NA	NA	Score=112;Name=245158_0_-_112	rs1801229	0.63	0.63	0.603	0.613818	0.8678	0.5585	0.6268	0.351	0.7556	0.86	0.52	0.65	0.39	0.7732	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.586302	1.586302	NA	0.889651	0.473899	NA	0.674	NA	5.1360156
1138	9	84207898	84207898	C	G	intronic	TLE1	NA	NA	NA	intronic	ENSG00000196781	NA	NA	NA	Score=492;Name=lod=133	NA	9q21.32	NA	NA	Name=24	NA	rs7023704	0.22	0.22	0.188	0.222045	0.2664	0.2966	0.255	0.028	0.3384	0.29	0.27	0.23	0.04	0.2993	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.671922	3.671922	NA	0.298372	0.070813	NA	0.138	NA	5.135928
1138	11	49831862	49831862	G	A	ncRNA_exonic	LOC440040	NA	NA	NA	ncRNA_exonic	ENSG00000205035	NA	NA	NA	Score=346;Name=lod=34	NA	11p11.12	NA	NA	NA	NA	rs10839383	0.46	0.46	0.41	0.433307	0.5308	0.5556	0.598	0.1619	0.4571	0.54	0.55	0.62	0.13	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.399574	NA	NA	NA	NA	NA	0.362	NA	5.1358666
1138	15	69315443	69315443	C	T	ncRNA_intronic	MIR548H4	NA	NA	NA	ncRNA_exonic	ENSG00000259745	NA	NA	NA	Score=488;Name=lod=128	NA	15q23	NA	NA	NA	NA	rs438866	0.29	0.29	0.28	0.265575	0.5308	0.0575	0.3473	0.1362	0.3241	0.54	0.07	0.37	0.12	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.117327	NA	NA	NA	NA	NA	0.275	NA	5.1358666
1138	15	76032462	76032462	A	T	upstream	DNM1P35	NA	NA	NA	ncRNA_intronic	ENSG00000260288	NA	NA	NA	NA	NA	15q24.2	NA	NA	NA	NA	NA	NA	NA	NA	0.0131789	0.0308	NA	0.0231	0.0023	0.0164	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.085235	NA	NA	NA	NA	NA	NA	NA	5.1358666
1138	6	39040654	39040654	A	C	exonic	GLP1R	NA	synonymous SNV	GLP1R:NM_002062:exon6:c.A526C:p.R176R	exonic	ENSG00000112164	NA	synonymous SNV	ENSG00000112164:ENST00000373256:exon6:c.A526C:p.R176R	Score=619;Name=lod=436	NA	6p21.2	NA	NA	NA	NA	rs2235868	0.45	0.45	0.409	0.445288	0.5209	0.4444	0.536	0.3147	0.4806	0.51	0.45	0.52	0.32	0.487	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.37327	1.37327	NA	0.522907	0.346573	ID=COSM150087;OCCURENCE=1(stomach)	0.529	NA	5.1358596
1138	17	61901439	61901439	T	C	intronic	FTSJ3	NA	NA	NA	intronic	ENSG00000108592	NA	NA	NA	Score=522;Name=lod=177	NA	17q23.3	Score=894;Name=V$AREB6_02	Name=ZNF263	NA	NA	rs2584627	0.68	0.68	0.701	0.732428	0.5984	0.5556	0.6816	0.9781	0.7566	0.6	0.58	0.64	0.97	0.6598	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.372627	NA	NA	0.606512	0.910803	NA	0.681	NA	5.135288
1138	14	95921741	95921741	C	T	exonic	SYNE3	NA	synonymous SNV	SYNE3:NM_152592:exon5:c.G1110A:p.E370E	exonic	ENSG00000176438	NA	synonymous SNV	ENSG00000176438:ENST00000554873:exon1:c.G381A:p.E127E,ENSG00000176438:ENST00000334258:exon5:c.G1110A:p.E370E,ENSG00000176438:ENST00000553340:exon5:c.G1110A:p.E370E,ENSG00000176438:ENST00000557275:exon5:c.G1110A:p.E370E	Score=410;Name=lod=62	NA	14q32.13	NA	NA	NA	NA	rs4905324	0.48	0.48	0.437	0.455272	0.501	0.5516	0.6542	0.2133	0.4949	0.51	0.57	0.63	0.22	0.5222	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.081335	NA	NA	0.508256	0.268724	ID=COSM1477888,COSM433558,COSM1477887;OCCURENCE=1(breast)	0.514	NA	5.1352106
1139	13	21894947	21894947	C	T	ncRNA_intronic	MIPEPP3	NA	NA	NA	ncRNA_exonic	ENSG00000215571	NA	NA	NA	Score=699;Name=lod=922	NA	13q12.11	NA	NA	NA	NA	rs9580079	0.41	0.41	0.411	0.415136	0.5318	0.3165	0.3588	0.3646	0.5051	0.53	0.31	0.4	0.36	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.808319	NA	NA	NA	NA	NA	0.464	NA	5.1348666
1139	19	15852223	15852223	A	C	exonic	OR10H3	NA	nonsynonymous SNV	OR10H3:NM_013938:exon1:c.A21C:p.R7S	exonic	ENSG00000171936	NA	nonsynonymous SNV	ENSG00000171936:ENST00000305892:exon1:c.A21C:p.R7S	NA	NA	19p13.12	NA	NA	NA	NA	rs1966357	0.65	0.65	0.652	0.65595	0.7624	0.3323	0.598	0.8064	0.7178	0.77	0.35	0.65	0.82	0.702	0.82	0.39	T	0.0	B	0.0	B	0.036	N	1.000	P	-2.205	N	5.15	T	-1.057	T	0.000	T	0.012	0.154	4.831	-1.7	-0.391	-0.234	3.041	0.154468	NA	0.65	0.735	0.803904	ID=COSM1179781;OCCURENCE=2(prostate),1(large_intestine)	0.681	NA	5.1339334
1139	1	224849358	224849358	C	T	intronic	CNIH3	NA	NA	NA	ncRNA_exonic	ENSG00000234247	NA	NA	NA	Score=505;Name=lod=151	NA	1q42.12	NA	NA	NA	NA	rs7554310	0.25	0.25	0.225	0.244209	0.1998	0.3353	0.3473	0.174	0.2178	0.22	0.35	0.32	0.15	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.399859	NA	NA	NA	NA	NA	0.167	NA	5.1335333
1139	8	62491628	62491628	A	G	intronic	ASPH	NA	NA	NA	ncRNA_exonic	ENSG00000254285	NA	NA	NA	Score=533;Name=lod=196	NA	8q12.3	NA	NA	NA	NA	rs7836217	0.32	0.32	0.312	0.353235	0.1998	0.3105	0.2406	0.5726	0.3384	0.19	0.34	0.24	0.56	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.144929	NA	NA	NA	NA	NA	0.42	NA	5.1335333
1139	12	69036611	69036611	C	A	intronic	RAP1B	NA	NA	NA	ncRNA_exonic	ENSG00000234925	NA	NA	NA	Score=637;Name=lod=518	NA	12q15	NA	NA	NA	NA	rs3814238	0.18	0.18	0.181	0.215855	0.1998	0.2659	0.1398	0.0469	0.4632	0.19	0.28	0.14	0.08	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.226534	NA	NA	NA	NA	NA	0.21	NA	5.1335333
1139	1	152325732	152325732	G	A	exonic	FLG2	NA	synonymous SNV	FLG2:NM_001014342:exon3:c.C4530T:p.H1510H	exonic	ENSG00000143520	NA	synonymous SNV	ENSG00000143520:ENST00000388718:exon3:c.C4530T:p.H1510H	NA	NA	1q21.3	NA	NA	NA	NA	rs12022217	0.3	0.3	0.281	0.316494	0.1421	0.4534	0.4049	0.2905	0.3272	0.14	0.49	0.34	0.29	0.2322	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.291107	NA	NA	0.158953	0.260781	NA	0.275	NA	5.1334136
1139	1	161185058	161185058	G	T	upstream;downstream	FCER1G;NDUFS2	NA	NA	NA	upstream;downstream	ENSG00000158869;ENSG00000158864	NA	NA	NA	NA	NA	1q23.3	NA	Name=Max	Name=7	NA	rs2070901	0.37	0.37	0.368	0.390775	0.2694	0.4464	0.366	0.4334	0.4182	0.26	0.46	0.34	0.45	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.819972	NA	NA	0.264299	0.395954	NA	0.355	NA	5.1329676
1139	15	34032131	34032131	G	A	exonic	RYR3	NA	synonymous SNV	RYR3:NM_001036:exon51:c.G7755A:p.T2585T,RYR3:NM_001243996:exon51:c.G7755A:p.T2585T	exonic	ENSG00000198838	NA	synonymous SNV	ENSG00000198838:ENST00000389232:exon51:c.G7755A:p.T2585T,ENSG00000198838:ENST00000415757:exon51:c.G7755A:p.T2585T	NA	NA	15q14	NA	NA	NA	NA	rs41279212	0.21	0.21	0.207	0.234026	0.1839	0.1647	0.1787	0.2988	0.3088	0.16	0.18	0.19	0.34	0.1889	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.484809	NA	NA	0.160935	0.250771	NA	0.283	NA	5.1329316
1139	18	32887914	32887914	A	G	ncRNA_exonic	ZNF271	NA	NA	NA	ncRNA_exonic	ENSG00000257267	NA	NA	NA	Score=317;Name=lod=26	NA	18q12.2	NA	NA	NA	NA	rs1131709	0.48	0.48	0.51	0.488618	0.5338	0.372	0.4553	0.5666	0.4806	0.51	0.4	0.44	0.55	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.824806	1.824806	NA	NA	NA	NA	0.507	NA	5.1328666
1139	6	170068180	170068180	A	G	exonic	WDR27	NA	synonymous SNV	WDR27:NM_182552:exon5:c.T558C:p.V186V	exonic	ENSG00000184465	NA	synonymous SNV	ENSG00000184465:ENST00000333572:exon5:c.T558C:p.V186V,ENSG00000184465:ENST00000448612:exon5:c.T558C:p.V186V	NA	NA	6q27	NA	NA	NA	NA	rs3823465	0.33	0.33	0.302	0.318291	0.162	0.7093	0.3343	0.1899	0.2382	0.17	0.71	0.3	0.18	0.2322	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.517669	NA	NA	0.140453	0.174743	NA	0.21	NA	5.1320136
1139	1	12638964	12638964	T	C	exonic	DHRS3	NA	synonymous SNV	DHRS3:NM_004753:exon4:c.A480G:p.P160P	exonic	ENSG00000162496	NA	synonymous SNV	ENSG00000162496:ENST00000376223:exon4:c.A480G:p.P160P,ENSG00000162496:ENST00000430996:exon4:c.A225G:p.P75P	NA	NA	1p36.22	Score=795;Name=V$PAX2_01	Name=Pol2	NA	NA	rs2275875	0.78	0.78	0.797	0.804712	0.8469	0.7282	0.7291	0.8011	0.8988	0.84	0.74	0.76	0.76	0.8314	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.443461	NA	NA	0.856395	0.827508	NA	0.754	NA	5.1319716
1139	19	6669934	6669934	G	A	exonic	TNFSF14	NA	synonymous SNV	TNFSF14:NM_003807:exon2:c.C147T:p.A49A	exonic	ENSG00000125735	NA	synonymous SNV	ENSG00000125735:ENST00000599359:exon2:c.C147T:p.A49A	NA	NA	19p13.3	NA	NA	NA	NA	rs2291668	0.22	0.22	0.21	0.176318	0.1958	0.2788	0.2248	0.0983	0.1217	0.2	0.32	0.23	0.12	0.1806	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.562276	NA	NA	0.158372	0.111212	NA	0.21	NA	5.1318946
1139	17	25749545	25749545	C	T	ncRNA_intronic	TBC1D3P5	NA	NA	NA	ncRNA_intronic	ENSG00000266433	NA	NA	NA	Score=278;Name=lod=18	NA	17q11.1	NA	NA	NA	NA	rs4795650	0.59	0.59	0.596	0.553115	0.5348	0.6776	0.4539	0.5734	0.4867	0.56	0.68	0.47	0.62	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.281354	NA	NA	NA	NA	NA	0.623	NA	5.1318666
1139	17	25749688	25749688	G	A	ncRNA_exonic	TBC1D3P5	NA	NA	NA	ncRNA_exonic	ENSG00000266433	NA	NA	NA	Score=491;Name=lod=132	NA	17q11.1	NA	NA	NA	NA	rs4795651	0.59	0.59	0.602	0.553115	0.5348	0.6776	0.4539	0.5734	0.4867	0.56	0.68	0.47	0.62	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.014023	NA	NA	NA	NA	NA	0.623	NA	5.1318666
1139	6	151256680	151256680	G	A	intronic	MTHFD1L	NA	NA	NA	ncRNA_exonic	ENSG00000218996	NA	NA	NA	Score=735;Name=lod=1296	NA	6q25.1	NA	NA	NA	NA	rs6557103	0.16	0.16	0.18	0.171725	0.2018	0.0198	0.1254	0.2496	0.2249	0.2	0.01	0.14	0.28	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.073122	NA	NA	NA	NA	NA	0.196	NA	5.1315333
1139	10	18828371	18828371	C	T	exonic	CACNB2	NA	synonymous SNV	CACNB2:NM_000724:exon13:c.C1536T:p.Y512Y,CACNB2:NM_201570:exon13:c.C1557T:p.Y519Y,CACNB2:NM_201590:exon13:c.C1539T:p.Y513Y,CACNB2:NM_001167945:exon14:c.C1503T:p.Y501Y,CACNB2:NM_201571:exon14:c.C1617T:p.Y539Y,CACNB2:NM_201572:exon14:c.C1545T:p.Y515Y,CACNB2:NM_201593:exon14:c.C1587T:p.Y529Y,CACNB2:NM_201596:exon14:c.C1701T:p.Y567Y,CACNB2:NM_201597:exon14:c.C1629T:p.Y543Y	exonic	ENSG00000165995	NA	synonymous SNV	ENSG00000165995:ENST00000377328:exon7:c.C951T:p.Y317Y,ENSG00000165995:ENST00000377315:exon13:c.C1557T:p.Y519Y,ENSG00000165995:ENST00000377319:exon13:c.C1422T:p.Y474Y,ENSG00000165995:ENST00000377329:exon13:c.C1539T:p.Y513Y,ENSG00000165995:ENST00000396576:exon13:c.C1536T:p.Y512Y,ENSG00000165995:ENST00000282343:exon14:c.C1617T:p.Y539Y,ENSG00000165995:ENST00000324631:exon14:c.C1701T:p.Y567Y,ENSG00000165995:ENST00000352115:exon14:c.C1629T:p.Y543Y,ENSG00000165995:ENST00000377331:exon14:c.C1545T:p.Y515Y	NA	NA	10p12.31	NA	NA	NA	NA	rs2228645	0.22	0.22	0.201	0.23722	0.161	0.2381	0.3314	0.1899	0.3119	0.18	0.26	0.31	0.16	0.2129	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.624471	NA	NA	0.161512	0.208806	ID=COSM146899;OCCURENCE=1(stomach)	0.159	NA	5.1312546
1139	20	61981134	61981134	G	A	exonic	CHRNA4	NA	synonymous SNV	CHRNA4:NM_000744:exon5:c.C1629T:p.S543S,CHRNA4:NM_001256573:exon5:c.C1101T:p.S367S	exonic	ENSG00000101204	NA	synonymous SNV	ENSG00000101204:ENST00000370263:exon5:c.C1629T:p.S543S	NA	NA	20q13.33	NA	NA	NA	NA	rs1044396	0.36	0.36	0.327	0.323482	0.5288	0.2679	0.4899	0.0613	0.4059	0.53	0.29	0.5	0.07	0.4659	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.283058	NA	NA	0.54094	0.14925	NA	0.362	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000079313.3;CLNDSDB=.;CLNDSDBID=.	5.1310266
1139	7	66785029	66785029	G	T	ncRNA_intronic	STAG3L4	NA	NA	NA	ncRNA_intronic	ENSG00000106610	NA	NA	NA	Score=501;Name=lod=145	NA	7q11.21	NA	NA	NA	NA	rs2537522	0.46	0.46	0.425	0.449681	0.5358	0.3393	0.5389	0.4266	0.4427	0.52	0.38	0.5	0.42	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.742543	NA	NA	NA	NA	NA	0.529	NA	5.1308666
1139	19	55485899	55485899	G	A	exonic	NLRP2	NA	synonymous SNV	NLRP2:NM_001174081:exon3:c.G312A:p.K104K,NLRP2:NM_001174082:exon3:c.G312A:p.K104K,NLRP2:NM_017852:exon3:c.G312A:p.K104K,NLRP2:NM_001174083:exon4:c.G243A:p.K81K	exonic	ENSG00000022556	NA	synonymous SNV	ENSG00000022556:ENST00000397169:exon2:c.G108A:p.K36K,ENSG00000022556:ENST00000263437:exon3:c.G312A:p.K104K,ENSG00000022556:ENST00000339757:exon3:c.G312A:p.K104K,ENSG00000022556:ENST00000391721:exon3:c.G312A:p.K104K,ENSG00000022556:ENST00000433772:exon3:c.G312A:p.K104K,ENSG00000022556:ENST00000448584:exon3:c.G312A:p.K104K,ENSG00000022556:ENST00000537859:exon3:c.G312A:p.K104K,ENSG00000022556:ENST00000538819:exon3:c.G312A:p.K104K,ENSG00000022556:ENST00000539848:exon3:c.G312A:p.K104K,ENSG00000022556:ENST00000543010:exon3:c.G312A:p.K104K,ENSG00000022556:ENST00000585500:exon3:c.G105A:p.K35K,ENSG00000022556:ENST00000588107:exon3:c.G312A:p.K104K,ENSG00000022556:ENST00000588619:exon3:c.G312A:p.K104K,ENSG00000022556:ENST00000427260:exon4:c.G243A:p.K81K	NA	NA	19q13.42	NA	NA	NA	NA	rs2217659	0.21	0.21	0.219	0.177117	0.1779	0.3512	0.1542	0.093	0.1268	0.17	0.41	0.14	0.1	0.1806	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.785693	NA	NA	0.177326	0.113987	NA	0.196	NA	5.1308406
1139	1	200956288	200956288	A	G	exonic	KIF21B	NA	synonymous SNV	KIF21B:NM_001252100:exon25:c.T3450C:p.A1150A,KIF21B:NM_001252102:exon25:c.T3450C:p.A1150A,KIF21B:NM_001252103:exon25:c.T3450C:p.A1150A,KIF21B:NM_017596:exon25:c.T3450C:p.A1150A	exonic	ENSG00000116852	NA	synonymous SNV	ENSG00000116852:ENST00000332129:exon25:c.T3450C:p.A1150A,ENSG00000116852:ENST00000360529:exon25:c.T3450C:p.A1150A,ENSG00000116852:ENST00000422435:exon25:c.T3450C:p.A1150A,ENSG00000116852:ENST00000461742:exon25:c.T3450C:p.A1150A	NA	NA	1q32.1	NA	NA	NA	NA	rs2275485	0.26	0.26	0.264	0.261981	0.1541	0.2897	0.2032	0.4531	0.1278	0.16	0.31	0.17	0.41	0.203	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.123018	NA	NA	0.178837	0.42374	NA	0.232	NA	5.1307296
1139	1	179310439	179310439	C	T	exonic	SOAT1	NA	synonymous SNV	SOAT1:NM_001252511:exon6:c.C600T:p.F200F,SOAT1:NM_001252512:exon6:c.C579T:p.F193F,SOAT1:NM_003101:exon7:c.C774T:p.F258F	exonic	ENSG00000057252	NA	synonymous SNV	ENSG00000057252:ENST00000539888:exon6:c.C579T:p.F193F,ENSG00000057252:ENST00000540564:exon6:c.C600T:p.F200F,ENSG00000057252:ENST00000367619:exon7:c.C774T:p.F258F,ENSG00000057252:ENST00000426956:exon7:c.C774T:p.F258F	NA	NA	1q25.2	NA	NA	NA	NA	rs7547733	0.09	0.09	0.072	0.0660942	0.2087	NA	0.1167	0.0061	0.0327	0.18	NA	0.14	0.01	0.1315	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.569894	NA	NA	0.19586	0.040626	NA	0.065	NA	5.1306066
1139	6	162989457	162989457	T	C	intronic	PARK2	NA	NA	NA	ncRNA_exonic	ENSG00000227913	NA	NA	NA	Score=325;Name=lod=28	NA	6q26	NA	NA	NA	NA	rs28578538	0.27	0.27	0.232	0.251597	0.2028	0.494	0.2161	0.115	0.2618	0.2	0.51	0.24	0.11	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.014249	NA	NA	NA	NA	NA	0.196	NA	5.1305333
1139	22	23632636	23632636	C	A	intronic	BCR	NA	NA	NA	intronic	ENSG00000186716	NA	NA	NA	NA	NA	22q11.23	NA	Name=CTCF,ZNF263,HDAC2_(SC-6296)	Name=91	NA	rs5759683	0.24	0.24	0.256	0.238818	0.3002	0.0873	0.2983	0.2685	0.2495	0.31	0.1	0.28	0.28	0.2703	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.811444	NA	NA	0.299535	0.253972	NA	0.268	NA	5.129965
1139	17	25753587	25753587	C	T	ncRNA_splicing	TBC1D3P5	NR_033892:exon11:c.1595+2C>T	NA	NA	ncRNA_splicing	ENSG00000266433	ENST00000586223:exon11:c.1595+2C>T	NA	NA	Score=536;Name=lod=202	NA	17q11.1	NA	NA	NA	NA	rs1993829	0.6	0.6	0.59	0.577676	0.5368	0.6845	0.4582	0.6498	0.4969	0.56	0.69	0.47	0.65	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.952533	NA	NA	NA	NA	NA	0.623	NA	5.1298666
1139	17	25756158	25756158	T	C	ncRNA_intronic	TBC1D3P5	NA	NA	NA	ncRNA_intronic	ENSG00000266433	NA	NA	NA	Score=289;Name=lod=20	NA	17q11.1	NA	NA	NA	NA	rs7220478	NA	NA	0.563	0.577676	0.5368	0.6835	0.4582	0.6505	0.4969	NA	NA	NA	NA	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.055357	NA	NA	NA	NA	NA	0.623	NA	5.1298666
1139	17	25756180	25756180	G	A	ncRNA_intronic	TBC1D3P5	NA	NA	NA	ncRNA_intronic	ENSG00000266433	NA	NA	NA	Score=289;Name=lod=20	NA	17q11.1	NA	NA	NA	NA	rs7212046	0.58	0.58	0.551	0.582867	0.5368	0.6835	0.4582	0.6702	0.4969	0.55	0.65	0.45	0.63	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.183739	NA	NA	NA	NA	NA	0.623	NA	5.1298666
1139	13	21894803	21894803	T	C	ncRNA_intronic	MIPEPP3	NA	NA	NA	ncRNA_exonic	ENSG00000215571	NA	NA	NA	Score=699;Name=lod=922	NA	13q12.11	NA	NA	NA	NA	rs9580077	NA	NA	0.343	0.429912	0.5378	0.3165	0.366	0.4123	0.5051	NA	NA	NA	NA	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.090898	NA	NA	NA	NA	NA	0.464	NA	5.1288666
1139	13	21894824	21894824	G	C	ncRNA_intronic	MIPEPP3	NA	NA	NA	ncRNA_exonic	ENSG00000215571	NA	NA	NA	Score=699;Name=lod=922	NA	13q12.11	NA	NA	NA	NA	rs9580078	0.43	0.43	0.414	0.434904	0.5378	0.3264	0.366	0.4168	0.5143	0.54	0.33	0.41	0.42	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.604721	NA	NA	NA	NA	NA	0.471	NA	5.1288666
1139	1	19029546	19029546	A	G	intronic	PAX7	NA	NA	NA	intronic	ENSG00000009709	NA	NA	NA	NA	NA	1p36.13	NA	Name=CTCF,CTCF_(SC-5916),Rad21	Name=6	NA	rs1416464	0.44	0.44	0.427	0.489816	0.2575	0.6071	0.3876	0.6445	0.4714	0.26	0.57	0.38	0.62	0.3694	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.023845	NA	NA	0.244518	0.564516	NA	0.37	NA	5.128582
1139	16	19492898	19492898	A	C	intronic	TMC5	NA	NA	NA	ncRNA_intronic	ENSG00000260592	NA	NA	NA	NA	NA	16p12.3	NA	Name=MafK_(SC-477),GATA-1,MafF_(M8194),MafK_(ab50322)	NA	NA	rs7185836	0.52	0.52	0.466	0.47524	0.2048	0.504	0.3372	0.8185	0.3579	0.35	0.56	0.4	0.81	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.142148	NA	NA	NA	NA	NA	0.558	NA	5.1285333
1139	14	106845308	106845308	A	T	intergenic	LINC00226,LINC00221	dist=100342;dist=93147	NA	NA	downstream	ENSG00000211957	NA	NA	NA	NA	NA	14q32.33	NA	Name=CTCF	Name=2	NA	rs112027281	0.14	0.14	0.1	0.185304	0.1203	0.0317	0.1801	0.3351	0.2117	0.09	0.03	0.18	0.31	0.1408	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.075203	NA	NA	0.11071	0.274974	NA	0.232	NA	5.12819
1139	1	15793913	15793913	G	A	exonic	CELA2A	NA	synonymous SNV	CELA2A:NM_033440:exon7:c.G672A:p.A224A	exonic	ENSG00000142615	NA	synonymous SNV	ENSG00000142615:ENST00000359621:exon7:c.G672A:p.A224A	NA	NA	1p36.21	NA	NA	NA	NA	rs1042010	0.17	0.17	0.182	0.179912	0.169	0.0446	0.1556	0.2965	0.1902	0.17	0.04	0.19	0.29	0.1828	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.82085	NA	NA	0.186977	0.277349	NA	0.145	NA	5.1278896
1139	2	239141505	239141505	A	G	ncRNA_exonic	LOC643387	NA	NA	NA	ncRNA_intronic	ENSG00000225057	NA	NA	NA	Score=821;Name=lod=2880	NA	2q37.3	NA	NA	NA	NA	rs11689432	0.53	0.53	0.504	0.527955	0.5388	0.3472	0.4366	0.708	0.5245	0.55	0.36	0.51	0.72	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.108919	NA	NA	NA	NA	NA	0.536	NA	5.1278666
1139	13	21893949	21893949	A	G	ncRNA_intronic	MIPEPP3	NA	NA	NA	ncRNA_exonic	ENSG00000215571	NA	NA	NA	Score=768;Name=lod=1760	NA	13q12.11	NA	NA	NA	NA	rs9580074	0.43	0.43	0.42	0.435104	0.5388	0.3264	0.366	0.4175	0.5133	0.54	0.33	0.41	0.42	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.157066	2.157066	NA	NA	NA	NA	0.493	NA	5.1278666
1139	13	21894420	21894420	C	T	ncRNA_intronic	MIPEPP3	NA	NA	NA	ncRNA_exonic	ENSG00000215571	NA	NA	NA	Score=768;Name=lod=1760	NA	13q12.11	NA	NA	NA	NA	rs9580075	0.44	0.44	0.409	0.438099	0.5388	0.3403	0.366	0.4191	0.5123	0.54	0.34	0.4	0.42	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.078507	NA	NA	NA	NA	NA	0.406	NA	5.1278666
1139	13	21894445	21894445	T	C	ncRNA_intronic	MIPEPP3	NA	NA	NA	ncRNA_exonic	ENSG00000215571	NA	NA	NA	Score=768;Name=lod=1760	NA	13q12.11	NA	NA	NA	NA	rs9580076	0.44	0.44	0.391	0.451677	0.5388	0.3165	0.3818	0.4856	0.5051	0.53	0.31	0.41	0.47	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.370041	NA	NA	NA	NA	NA	0.464	NA	5.1278666
1139	20	61039958	61039958	T	C	exonic	GATA5	NA	synonymous SNV	GATA5:NM_080473:exon7:c.A1128G:p.P376P	exonic	ENSG00000130700	NA	synonymous SNV	ENSG00000130700:ENST00000252997:exon7:c.A1128G:p.P376P	Score=371;Name=lod=43	NA	20q13.33	NA	NA	NA	NA	rs6061550	0.56	0.56	0.555	0.629193	0.4791	0.5238	0.451	0.8442	0.728	0.47	0.55	0.43	0.8	0.5504	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.304461	NA	NA	0.509423	0.778484	NA	0.507	NA	5.1277436
1139	5	9154659	9154659	G	C	exonic	SEMA5A	NA	synonymous SNV	SEMA5A:NM_003966:exon12:c.C1422G:p.G474G	exonic	ENSG00000112902	NA	synonymous SNV	ENSG00000112902:ENST00000382496:exon12:c.C1422G:p.G474G	Score=597;Name=lod=356	NA	5p15.31	NA	NA	NA	NA	rs1806151	0.32	0.32	0.291	0.273962	0.5676	0.2312	0.3199	0.0371	0.3037	0.56	0.22	0.35	0.06	0.4224	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.310222	1.310222	NA	0.549767	0.114843	NA	0.326	NA	5.1268996
1139	6	90408589	90408589	A	G	exonic	MDN1	NA	synonymous SNV	MDN1:NM_014611:exon59:c.T9163C:p.L3055L	exonic	ENSG00000112159	NA	synonymous SNV	ENSG00000112159:ENST00000369393:exon59:c.T9163C:p.L3055L,ENSG00000112159:ENST00000428876:exon59:c.T9163C:p.L3055L	NA	NA	6q15	NA	NA	NA	NA	rs3736984	0.11	0.11	0.105	0.153754	0.1869	0.0813	0.1225	0.0779	0.319	0.17	0.07	0.11	0.08	0.1732	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.777751	NA	NA	0.179884	0.087154	NA	0.159	NA	5.1266826
1139	2	132201862	132201862	C	G	ncRNA_exonic	LOC401010	NA	NA	NA	ncRNA_exonic	ENSG00000217950	NA	NA	NA	Score=565;Name=lod=263	NA	2q21.1	NA	NA	NA	NA	rs1806887	0.39	0.39	0.3	0.38758	0.2326	0.7589	0.5259	0.2035	0.3149	0.23	0.73	0.45	0.22	0.3084	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.036075	NA	NA	NA	NA	NA	0.297	NA	5.1256666
1139	2	132201930	132201930	T	C	ncRNA_exonic	LOC401010	NA	NA	NA	ncRNA_exonic	ENSG00000217950	NA	NA	NA	Score=565;Name=lod=263	NA	2q21.1	NA	NA	NA	NA	rs13411254	0.36	0.36	0.294	0.38758	0.2326	0.7589	0.5259	0.2035	0.3149	0.21	0.67	0.41	0.19	0.3085	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.129601	NA	NA	NA	NA	NA	0.29	NA	5.1255666
1139	9	92065482	92065482	C	T	intronic	SEMA4D	NA	NA	NA	ncRNA_exonic	ENSG00000231799	NA	NA	NA	Score=737;Name=lod=1314	NA	9q22.2	NA	NA	NA	NA	rs36064343	0.11	0.11	0.094	0.104433	0.2078	0.003	0.1369	0.0091	0.2086	0.23	0.0035	0.12	0.02	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.238366	NA	NA	NA	NA	NA	0.109	NA	5.1255333
1140	2	51056712	51056712	C	A	intronic	NRXN1	NA	NA	NA	ncRNA_exonic	ENSG00000238165	NA	NA	NA	Score=582;Name=lod=310	NA	2p16.3	NA	NA	NA	NA	rs72889466	0.15	0.15	0.094	0.122604	0.2087	0.1389	0.1427	0.0567	0.092	0.21	0.15	0.14	0.05	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.852108	NA	NA	NA	NA	NA	0.167	NA	5.1246333
1140	2	132202050	132202050	T	C	ncRNA_exonic	LOC401010	NA	NA	NA	ncRNA_exonic	ENSG00000217950	NA	NA	NA	Score=403;Name=lod=58	NA	2q21.1	NA	NA	NA	NA	rs13413908	0.39	0.39	0.323	0.38758	0.2326	0.7589	0.5259	0.2035	0.3149	0.23	0.72	0.45	0.22	0.3098	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.039578	NA	NA	NA	NA	NA	0.29	NA	5.1242666
1140	19	41945837	41945837	T	A	UTR5	ATP5SL	NM_018035:c.-33A>T,NM_001167871:c.-33A>T,NM_001167870:c.-33A>T,NM_001167869:c.-33A>T	NA	NA	UTR5	ENSG00000105341	ENST00000592922:c.-33A>T	NA	NA	NA	NA	19q13.2	NA	Name=GABP,Znf143_(16618-1-AP),E2F6_(H-50),TAF1,YY1_(C-20),Pol2(phosphoS2),Mxi1_(bHLH),SP1,Pol2,Rad21,ELF1_(SC-631),CEBPB,GTF2F1_(RAP-74),CTCF,Pol2(b),Pol2-4H8,KAP1,ZNF263,HA-E2F1,Egr-1,YY1,RFX5_(N-494),PAX5-C20,HEY1,NFKB,c-Myc,IRF1,TBP,USF-1	Name=148	NA	rs13346603	0.41	0.41	0.386	0.393171	0.4066	0.5635	0.5144	0.1899	0.3926	0.42	0.54	0.43	0.22	0.4066	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.163511	NA	NA	0.39593	0.237631	NA	0.355	NA	5.1242034
1140	15	40590134	40590134	G	A	exonic	PLCB2	NA	synonymous SNV	PLCB2:NM_004573:exon12:c.C1182T:p.S394S	exonic	ENSG00000137841	NA	synonymous SNV	ENSG00000137841:ENST00000260402:exon12:c.C1182T:p.S394S,ENSG00000137841:ENST00000456256:exon12:c.C1182T:p.S394S,ENSG00000137841:ENST00000557821:exon12:c.C1182T:p.S394S,ENSG00000137841:ENST00000558588:exon12:c.C1182T:p.S394S	Score=524;Name=lod=179	NA	15q15.1	NA	NA	NA	NA	rs2229690	0.68	0.68	0.677	0.690495	0.4742	0.7887	0.6744	0.8298	0.635	0.49	0.84	0.63	0.84	0.5818	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.858808	NA	NA	0.486493	0.780857	ID=COSM1158649;OCCURENCE=1(pancreas)	0.696	NA	5.1241736
1140	14	20770036	20770036	T	C	exonic	TTC5	NA	nonsynonymous SNV	TTC5:NM_138376:exon2:c.A140G:p.Q47R	exonic	ENSG00000136319	NA	nonsynonymous SNV	ENSG00000136319:ENST00000258821:exon2:c.A140G:p.Q47R,ENSG00000136319:ENST00000383029:exon2:c.A140G:p.Q47R	NA	NA	14q11.2	NA	NA	NA	NA	rs3742945	0.78	0.78	0.773	0.745607	0.7406	0.7956	0.8559	0.7579	0.6043	0.75	0.8	0.83	0.75	0.7368	0.83	0.78	T	0.0	B	0.0	B	0.072	N	1.000	P	-0.55	N	1.6	T	-1.008	T	0.000	T	0.275	-1.008	0.248	0.384	-0.367	-0.336	8.813	-1.008434	NA	0.69	0.73186	0.747617	ID=COSM1179594;OCCURENCE=1(prostate)	0.746	NA	5.1240734
1140	6	74320306	74320306	C	T	intronic	SLC17A5	NA	NA	NA	intronic	ENSG00000119899	NA	NA	NA	NA	NA	6q13	NA	Name=CTCF,Rad21,CTCF_(C-20),RFX5_(N-494),SMC3_(ab9263)	Name=130	NA	rs4708065	0.24	0.24	0.247	0.238419	0.3072	0.0208	0.1758	0.4448	0.1575	0.31	0.02	0.17	0.42	0.2601	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.221791	NA	NA	0.308953	0.416931	NA	0.268	NA	5.123747
1140	5	75884734	75884734	G	A	exonic	IQGAP2	NA	synonymous SNV	IQGAP2:NM_006633:exon6:c.G462A:p.L154L	exonic	ENSG00000145703	NA	synonymous SNV	ENSG00000145703:ENST00000505766:exon5:c.G312A:p.L104L,ENSG00000145703:ENST00000274364:exon6:c.G462A:p.L154L,ENSG00000145703:ENST00000514350:exon6:c.G381A:p.L127L	Score=498;Name=lod=141	NA	5q13.3	NA	NA	NA	NA	rs1131232	0.64	0.64	0.644	0.696086	0.492	0.751	0.6671	0.7572	0.7873	0.5	0.76	0.62	0.75	0.5752	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.433906	NA	NA	0.476744	0.702678	NA	0.674	NA	5.1227226
1140	1	47040594	47040594	C	T	intronic	MKNK1	NA	NA	NA	UTR3	ENSG00000079277	ENST00000545730:c.*11G>A	NA	NA	Score=734;Name=lod=1285	NA	1p33	NA	NA	NA	NA	rs55664133	0.01	0.01	0.002	0.00419329	0.0149	NA	0.0072	NA	0.001	0.02	NA	0.01	NA	0.0129	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.237821	1.237821	NA	0.016163	0.002724	NA	NA	NA	5.1227037
1140	16	56643343	56643343	G	C	UTR3	MT2A	NM_005953:c.*77G>C	NA	NA	UTR3	ENSG00000125148	ENST00000245185:c.*77G>C,ENST00000561491:c.*246G>C	NA	NA	NA	NA	16q12.2	NA	Name=Sin3Ak-20,Pol2(b),AP-2gamma,Pol2	NA	NA	rs10636	0.24	0.24	0.23	0.273962	0.2107	0.2381	0.2435	0.2731	0.3988	0.21	0.25	0.26	0.27	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.580991	NA	NA	NA	NA	NA	0.413	NA	5.1226334
1140	17	46114620	46114620	C	T	intronic	COPZ2	NA	NA	NA	intronic	ENSG00000005243	NA	NA	NA	NA	NA	17q21.32	NA	Name=Pol2,SMC3_(ab9263),CTCF,Rad21,CTCF_(SC-5916),Sin3Ak-20	Name=115	NA	rs12940701	0.25	0.25	0.234	0.288738	0.2823	0.2589	0.3977	0.1906	0.3814	0.26	0.26	0.32	0.18	0.3151	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.783927	NA	NA	0.280818	0.188316	NA	0.304	NA	5.121782
1140	12	120589064	120589064	G	C	exonic	GCN1L1	NA	synonymous SNV	GCN1L1:NM_006836:exon34:c.C4194G:p.A1398A	exonic	ENSG00000089154	NA	synonymous SNV	ENSG00000089154:ENST00000300648:exon34:c.C4194G:p.A1398A	NA	NA	12q24.23	NA	NA	NA	NA	rs2286045	0.38	0.38	0.39	0.382388	0.1561	0.5427	0.17	0.6573	0.229	0.16	0.55	0.19	0.65	0.236	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.758141	NA	NA	0.153088	0.559954	ID=COSM1359331;OCCURENCE=1(large_intestine)	0.268	NA	5.1214786
1140	20	61981104	61981104	C	T	exonic	CHRNA4	NA	synonymous SNV	CHRNA4:NM_000744:exon5:c.G1659A:p.A553A,CHRNA4:NM_001256573:exon5:c.G1131A:p.A377A	exonic	ENSG00000101204	NA	synonymous SNV	ENSG00000101204:ENST00000370263:exon5:c.G1659A:p.A553A	NA	NA	20q13.33	NA	NA	NA	NA	rs1044397	0.4	0.4	0.37	0.351837	0.5288	0.4008	0.4899	0.0635	0.411	0.53	0.42	0.5	0.07	0.475	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.188258	NA	NA	0.541773	0.151068	NA	0.362	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000079314.3;CLNDSDB=.;CLNDSDBID=.	5.1210936
1140	1	12640650	12640650	C	T	exonic	DHRS3	NA	synonymous SNV	DHRS3:NM_004753:exon2:c.G240A:p.T80T	exonic	ENSG00000162496	NA	synonymous SNV	ENSG00000162496:ENST00000376223:exon2:c.G240A:p.T80T	NA	NA	1p36.22	NA	NA	NA	NA	rs11540058	0.1	0.1	0.099	0.0796725	0.1918	0.002	0.0764	0.0446	0.0941	0.2	0.0035	0.09	0.04	0.1471	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.069925	NA	NA	0.207093	0.066727	NA	0.203	NA	5.1206736
1140	2	202003010	202003010	T	C	intronic	CFLAR	NA	NA	NA	ncRNA_exonic	ENSG00000232133	NA	NA	NA	Score=842;Name=lod=3519	NA	2q33.1	NA	NA	NA	NA	rs7560613	0.2	0.2	0.2	0.200879	0.2127	0.0149	0.1513	0.4327	0.1022	0.21	0.01	0.18	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.109076	NA	NA	NA	NA	NA	0.268	NA	5.1206333
1140	11	116906728	116906728	T	C	intronic	SIK3	NA	NA	NA	ncRNA_exonic	ENSG00000234268	NA	NA	NA	Score=696;Name=lod=898	NA	11q23.3	NA	NA	NA	NA	rs4938327	0.3	0.3	0.274	0.350639	0.2127	0.1905	0.3256	0.5703	0.3783	0.2	0.21	0.29	0.56	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.135367	NA	NA	NA	NA	NA	0.225	NA	5.1206333
1140	18	28721882	28721882	T	C	intronic	DSC1	NA	NA	NA	ncRNA_intronic	ENSG00000265888	NA	NA	NA	NA	NA	18q12.1	NA	NA	Name=3	NA	rs12455973	0.37	0.37	0.375	0.345647	0.2127	0.5665	0.3746	0.4115	0.1452	0.2	0.57	0.35	0.4	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.335146	1.335146	NA	NA	NA	ID=COSN165628;OCCURENCE=1(breast)	0.246	NA	5.1206333
1140	1	29542926	29542926	A	T	intronic	MECR	NA	NA	NA	intronic	ENSG00000116353	NA	NA	NA	Score=265;Name=lod=16	NA	1p35.3	NA	NA	Name=22	NA	rs3003636	0.74	0.74	0.72	0.718051	0.8797	0.5625	0.7334	0.7231	0.6943	0.88	0.54	0.77	0.73	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.743789	1.743789	NA	NA	NA	NA	0.732	NA	5.1203
1140	16	72135014	72135014	T	C	exonic	DHX38	NA	synonymous SNV	DHX38:NM_014003:exon10:c.T1308C:p.A436A	exonic	ENSG00000140829	NA	synonymous SNV	ENSG00000140829:ENST00000268482:exon10:c.T1308C:p.A436A	Score=540;Name=lod=208	NA	16q22.2	NA	NA	NA	NA	rs1050363	0.52	0.52	0.554	0.557907	0.5	0.3591	0.3963	0.823	0.5787	0.5	0.38	0.43	0.8	0.5172	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.4857	1.4857	NA	0.529767	0.75364	ID=COSM148115;OCCURENCE=1(stomach)	0.551	NA	5.1196996
1140	16	75327916	75327916	A	G	exonic	CFDP1	NA	synonymous SNV	CFDP1:NM_006324:exon7:c.T834C:p.L278L	exonic	ENSG00000153774	NA	synonymous SNV	ENSG00000153774:ENST00000283882:exon7:c.T834C:p.L278L	Score=601;Name=lod=368	NA	16q23.1	NA	NA	Name=30	NA	rs6624	0.76	0.76	0.755	0.785942	0.8469	0.6002	0.8991	0.7821	0.8395	0.85	0.57	0.86	0.78	0.8427	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.170588	NA	NA	0.857907	0.789126	NA	0.746	NA	5.1191596
1140	12	42481732	42481732	G	A	exonic	GXYLT1	NA	synonymous SNV	GXYLT1:NM_001099650:exon7:c.C1086T:p.D362D,GXYLT1:NM_173601:exon8:c.C1179T:p.D393D	exonic	ENSG00000151233	NA	synonymous SNV	ENSG00000151233:ENST00000280876:exon7:c.C1086T:p.D362D,ENSG00000151233:ENST00000398675:exon8:c.C1179T:p.D393D	NA	NA	12q12	NA	NA	NA	NA	rs7972986	0.18	0.18	0.179	0.186102	0.1879	0.1597	0.2435	0.1498	0.2198	0.16	0.17	0.25	0.16	0.1831	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.580669	NA	NA	0.176521	0.157319	NA	0.159	NA	5.1191456
1140	8	139164570	139164570	C	T	exonic	FAM135B	NA	synonymous SNV	FAM135B:NM_015912:exon13:c.G2148A:p.P716P	exonic	ENSG00000147724	NA	synonymous SNV	ENSG00000147724:ENST00000467365:exon1:c.G78A:p.P26P,ENSG00000147724:ENST00000276737:exon13:c.G2148A:p.P716P,ENSG00000147724:ENST00000395297:exon13:c.G2148A:p.P716P	NA	NA	8q24.23	NA	NA	NA	NA	rs3750307	0.2	0.2	0.21	0.213658	0.173	0.2321	0.1931	0.2057	0.2618	0.16	0.23	0.2	0.22	0.1923	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.801137	NA	NA	0.182268	0.192581	ID=COSM1455065,COSM1455064;OCCURENCE=1(large_intestine)	0.326	NA	5.1190986
1140	9	33026572	33026572	T	C	exonic	DNAJA1	NA	synonymous SNV	DNAJA1:NM_001539:exon2:c.T90C:p.A30A	exonic	ENSG00000086061	NA	synonymous SNV	ENSG00000086061:ENST00000330899:exon2:c.T90C:p.A30A	Score=680;Name=lod=771	NA	9p21.1	NA	NA	NA	NA	rs20583	0.6	0.6	0.627	0.597843	0.5119	0.5744	0.4784	0.857	0.4448	0.51	0.56	0.5	0.86	0.5191	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.64766	1.64766	NA	0.516628	0.793463	NA	0.674	NA	5.1190386
1140	4	104062223	104062223	C	T	exonic	CENPE	NA	synonymous SNV	CENPE:NM_001813:exon36:c.G5502A:p.T1834T	exonic	ENSG00000138778	NA	synonymous SNV	ENSG00000138778:ENST00000380026:exon35:c.G5427A:p.T1809T,ENSG00000138778:ENST00000265148:exon36:c.G5502A:p.T1834T	NA	NA	4q24	NA	NA	NA	NA	rs1381658	0.14	0.14	0.132	0.169129	0.1779	0.1548	0.1916	0.0431	0.3292	0.17	0.14	0.19	0.05	0.1909	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.238617	NA	NA	0.179045	0.062926	NA	0.239	NA	5.1188216
1140	2	202003170	202003170	A	G	intronic	CFLAR	NA	NA	NA	ncRNA_exonic	ENSG00000232133	NA	NA	NA	Score=842;Name=lod=3519	NA	2q33.1	NA	NA	NA	NA	rs7573256	0.21	0.21	0.23	0.21226	0.2147	0.0139	0.1499	0.4758	0.1022	0.21	0.01	0.18	0.48	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.069749	NA	NA	NA	NA	NA	0.275	NA	5.1186333
1140	6	151256450	151256450	C	T	intronic	MTHFD1L	NA	NA	NA	ncRNA_exonic	ENSG00000218996	NA	NA	NA	Score=735;Name=lod=1296	NA	6q25.1	NA	NA	NA	NA	rs61748005	0.17	0.17	0.154	0.179712	0.2157	0.0308	0.1369	0.2496	0.2321	0.22	0.02	0.14	0.28	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.175975	NA	NA	NA	NA	NA	0.123	NA	5.1176333
1140	19	15839459	15839459	G	A	exonic	OR10H2	NA	synonymous SNV	OR10H2:NM_013939:exon1:c.G606A:p.L202L	exonic	ENSG00000171942	NA	synonymous SNV	ENSG00000171942:ENST00000305899:exon1:c.G606A:p.L202L	NA	NA	19p13.12	NA	NA	NA	NA	rs11669315	0.14	0.14	0.141	0.152556	0.17	0.123	0.121	0.1278	0.2209	0.17	0.14	0.11	0.13	0.1873	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.660327	NA	NA	0.192093	0.138901	NA	0.123	NA	5.1172736
1140	15	90231470	90231470	G	A	intronic	PEX11A	NA	NA	NA	ncRNA_exonic	ENSG00000241362	NA	NA	NA	Score=694;Name=lod=881	NA	15q26.1	NA	NA	NA	NA	rs1837774	0.14	0.14	0.139	0.146565	0.2167	0.001	0.1297	0.1868	0.182	0.21	0.0017	0.15	0.19	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.142976	NA	NA	NA	NA	NA	0.239	NA	5.1166333
1140	1	153004983	153004983	C	T	exonic	SPRR1B	NA	synonymous SNV	SPRR1B:NM_003125:exon2:c.C162T:p.P54P	exonic	ENSG00000169469	NA	synonymous SNV	ENSG00000169469:ENST00000307098:exon2:c.C162T:p.P54P	Score=409;Name=lod=61	NA	1q21.3	NA	NA	NA	NA	rs12195	0.52	0.52	0.486	0.497604	0.5179	0.5923	0.4265	0.441	0.5061	0.51	0.62	0.46	0.46	0.5094	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.487893	1.487893	NA	0.522801	0.471176	NA	0.442	NA	5.1165656
1140	19	44418343	44418343	C	T	exonic	ZNF45	NA	synonymous SNV	ZNF45:NM_003425:exon10:c.G1245A:p.P415P	exonic	ENSG00000124459	NA	synonymous SNV	ENSG00000124459:ENST00000589703:exon4:c.G1245A:p.P415P,ENSG00000124459:ENST00000269973:exon10:c.G1245A:p.P415P	NA	NA	19q13.31	NA	Name=SETDB1	NA	NA	rs406968	0.57	0.57	0.556	0.52496	0.5169	0.7996	0.647	0.3343	0.4213	0.51	0.82	0.58	0.38	0.5275	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.456416	NA	NA	0.506047	0.358829	ID=COSM1394342;OCCURENCE=1(large_intestine)	0.5	NA	5.1162196
1140	6	29910522	29910522	G	C	intronic	HLA-A	NA	NA	NA	ncRNA_exonic	ENSG00000227766	NA	NA	NA	NA	NA	6p22.1	NA	Name=CTCF,Pol2-4H8,Pol2	Name=11	NA	rs9260130	0.64	0.64	0.502	0.688498	0.6412	0.6925	0.7824	0.7231	0.6196	0.57	0.69	0.7	0.66	0.5763	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.468788	NA	NA	NA	NA	NA	0.522	NA	5.1158333
1140	1	78276977	78276977	G	A	intronic	FAM73A	NA	NA	NA	ncRNA_exonic	ENSG00000219201	NA	NA	NA	Score=502;Name=lod=146	NA	1p31.1	NA	NA	NA	NA	rs4121165	0.25	0.25	0.231	0.207867	0.2177	0.4167	0.1585	0.177	0.0593	0.21	0.43	0.17	0.18	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.07581	NA	NA	NA	NA	NA	0.21	NA	5.1156333
1140	15	58723675	58723675	C	T	upstream	LIPC	NA	NA	NA	intronic	ENSG00000128918,ENSG00000166035	NA	NA	NA	NA	Name=HDL cholesterol	15q21.3	NA	Name=FOXA1_(C-20),FOXA1_(SC-101058),FOXA2_(SC-6554)	NA	NA	rs1800588	0.36	0.36	0.371	0.386382	0.2087	0.3998	0.4222	0.5598	0.2955	0.21	0.41	0.39	0.53	0.2919	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.468088	NA	NA	0.217228	0.474315	NA	0.384	NA	5.1155053
1140	19	44418544	44418544	A	G	exonic	ZNF45	NA	synonymous SNV	ZNF45:NM_003425:exon10:c.T1044C:p.N348N	exonic	ENSG00000124459	NA	synonymous SNV	ENSG00000124459:ENST00000589703:exon4:c.T1044C:p.N348N,ENSG00000124459:ENST00000269973:exon10:c.T1044C:p.N348N	NA	NA	19q13.31	NA	Name=SETDB1	NA	NA	rs425221	0.57	0.57	0.548	0.525559	0.5169	0.7996	0.6499	0.3343	0.4223	0.51	0.82	0.58	0.38	0.5282	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.267832	NA	NA	0.506163	0.358602	NA	0.5	NA	5.1154036
1140	17	19247075	19247075	G	A	exonic	B9D1	NA	nonsynonymous SNV	B9D1:NM_001243473:exon6:c.C559T:p.H187Y	exonic	ENSG00000108641	NA	nonsynonymous SNV	ENSG00000108641:ENST00000477478:exon6:c.C427T:p.H143Y	NA	NA	17p11.2	NA	NA	Name=8	NA	rs4924987	0.4	0.4	0.341	0.310503	0.8121	0.004	0.5173	0.0726	0.2853	0.81	NA	0.59	0.08	0.5994	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.425069	NA	0.53	0.806744	0.195188	NA	0.399	NA	5.1150894
1141	1	207140440	207140440	C	T	exonic	FCAMR	NA	synonymous SNV	FCAMR:NM_001170631:exon3:c.G126A:p.A42A,FCAMR:NM_032029:exon3:c.G126A:p.A42A,FCAMR:NM_001122979:exon4:c.G126A:p.A42A	exonic	ENSG00000162897	NA	synonymous SNV	ENSG00000162897:ENST00000324852:exon3:c.G126A:p.A42A,ENSG00000162897:ENST00000450945:exon3:c.G126A:p.A42A,ENSG00000162897:ENST00000400962:exon4:c.G126A:p.A42A	NA	NA	1q32.1	NA	NA	NA	NA	rs11119933	0.26	0.26	0.261	0.236621	0.165	0.3165	0.1715	0.3797	0.0808	0.17	0.29	0.17	0.42	0.199	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.018315	NA	NA	0.187744	0.326531	ID=COSM146750;OCCURENCE=1(stomach)	0.333	NA	5.1149226
1141	2	132201718	132201718	T	C	ncRNA_exonic	LOC401010	NA	NA	NA	ncRNA_exonic	ENSG00000217950	NA	NA	NA	Score=378;Name=lod=46	NA	2q21.1	NA	NA	NA	NA	rs2001215	0.36	0.36	0.294	0.38758	0.2326	0.7589	0.5259	0.2035	0.3149	0.21	0.68	0.42	0.17	0.3192	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.073111	NA	NA	NA	NA	NA	0.246	NA	5.1148666
1141	7	89856608	89856608	C	T	exonic	STEAP2	NA	synonymous SNV	STEAP2:NM_001244945:exon3:c.C816T:p.L272L,STEAP2:NM_152999:exon3:c.C816T:p.L272L,STEAP2:NM_001040665:exon4:c.C816T:p.L272L,STEAP2:NM_001040666:exon4:c.C816T:p.L272L,STEAP2:NM_001244944:exon4:c.C816T:p.L272L,STEAP2:NM_001244946:exon4:c.C816T:p.L272L	exonic	ENSG00000157214	NA	synonymous SNV	ENSG00000157214:ENST00000287908:exon3:c.C816T:p.L272L,ENSG00000157214:ENST00000394626:exon3:c.C816T:p.L272L,ENSG00000157214:ENST00000402625:exon3:c.C816T:p.L272L,ENSG00000157214:ENST00000394621:exon4:c.C816T:p.L272L,ENSG00000157214:ENST00000394622:exon4:c.C816T:p.L272L,ENSG00000157214:ENST00000394629:exon4:c.C816T:p.L272L,ENSG00000157214:ENST00000394632:exon4:c.C816T:p.L272L	Score=490;Name=lod=131	NA	7q21.13	NA	NA	NA	NA	rs110360	0.44	0.44	0.436	0.438099	0.5119	0.2609	0.4467	0.475	0.4888	0.52	0.29	0.44	0.49	0.5104	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.646656	NA	NA	0.529891	0.494326	ID=COSM453529,COSM1488756;OCCURENCE=1(breast)	0.493	NA	5.1144756
1141	20	44522005	44522005	A	G	intronic	CTSA	NA	NA	NA	ncRNA_exonic	ENSG00000271984	NA	NA	NA	NA	NA	20q13.12	NA	Name=USF-1,Pol2-4H8,CEBPB,USF2,USF1_(SC-8983)	Name=25	NA	rs742034	0.63	0.63	0.603	0.61222	0.6103	0.6756	0.7378	0.5499	0.544	0.63	0.66	0.69	0.54	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.111302	NA	NA	0.608737	0.572977	NA	0.645	NA	5.1142963
1141	12	116429689	116429689	A	G	exonic	MED13L	NA	synonymous SNV	MED13L:NM_015335:exon17:c.T3070C:p.L1024L	exonic	ENSG00000123066	NA	synonymous SNV	ENSG00000123066:ENST00000281928:exon17:c.T3070C:p.L1024L	NA	NA	12q24.21	NA	NA	NA	NA	rs1865787	0.15	0.15	0.145	0.155751	0.1938	0.1815	0.1297	0.0643	0.2321	0.18	0.17	0.14	0.11	0.1732	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.694602	NA	NA	0.186279	0.0867	NA	0.152	NA	5.1133876
1141	19	19654117	19654117	G	C	exonic	CILP2	NA	synonymous SNV	CILP2:NM_153221:exon7:c.G1038C:p.L346L	exonic	ENSG00000160161	NA	synonymous SNV	ENSG00000160161:ENST00000291495:exon7:c.G1038C:p.L346L,ENSG00000160161:ENST00000586018:exon7:c.G1056C:p.L352L	NA	NA	19p13.11	NA	NA	NA	NA	rs7252453	0.21	0.21	0.224	0.254992	0.173	0.0308	0.2248	0.4947	0.2679	0.16	0.03	0.22	0.5	0.2045	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.017219	NA	NA	0.176279	0.442578	NA	0.246	NA	5.1128876
1141	17	72349040	72349040	C	T	exonic	KIF19	NA	synonymous SNV	KIF19:NM_153209:exon15:c.C2061T:p.S687S	exonic	ENSG00000196169	NA	synonymous SNV	ENSG00000196169:ENST00000389916:exon15:c.C2061T:p.S687S	NA	NA	17q25.1	NA	NA	NA	NA	rs9897137	0.29	0.29	0.302	0.311102	0.1819	0.0813	0.232	0.7519	0.1411	0.19	0.06	0.26	0.71	0.1983	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.259577	NA	NA	0.173991	0.632608	NA	0.283	NA	5.1124756
1141	19	57832214	57832214	G	T	UTR5	ZNF543	NM_213598:c.-8G>T	NA	NA	UTR5	ENSG00000178229	ENST00000321545:c.-8G>T	NA	NA	NA	NA	19q13.43	NA	NA	Name=32	NA	rs56960413	0.11	0.11	0.08	0.0874601	0.0716	0.1518	0.1297	0.0628	0.0409	0.07	0.18	0.14	0.06	0.0833	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.53555	NA	NA	0.066512	0.04562	NA	0.058	NA	5.1119214
1141	1	10479678	10479678	G	A	intronic	PGD	NA	NA	NA	intronic	ENSG00000142657	NA	NA	NA	NA	NA	1p36.22	NA	Name=Pol2	Name=3	NA	rs1889309	0.28	0.28	0.263	0.25	0.3091	0.2808	0.3213	0.1286	0.271	0.31	0.3	0.35	0.16	0.2779	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.153199	NA	NA	0.301279	0.156151	ID=COSM146396;OCCURENCE=1(stomach)	0.196	NA	5.111721
1141	16	33740770	33740770	C	G	intergenic	RNU6-76P,LINC00273	dist=177527;dist=220282	NA	NA	downstream	ENSG00000271620	NA	NA	NA	Score=355;Name=lod=37	NA	16p11.2	NA	Name=CTCF	NA	NA	rs2549428	NA	NA	0.255	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3883	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.325472	NA	NA	NA	NA	NA	0.029	NA	5.1117
1141	3	124376653	124376653	G	A	intronic	KALRN	NA	NA	NA	intronic	ENSG00000160145	NA	NA	NA	Score=516;Name=lod=167	NA	3q21.2	Score=809;Name=V$HMX1_01	NA	NA	NA	rs106520	0.4	0.4	0.369	0.362021	0.3052	0.7867	0.3905	0.1649	0.229	0.31	0.78	0.35	0.13	0.3186	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.245738	2.245738	NA	0.264535	0.169542	NA	0.246	NA	5.111665
1141	7	158476148	158476148	G	A	intronic	NCAPG2	NA	NA	NA	intronic	ENSG00000146918	NA	NA	NA	NA	NA	7q36.3	NA	Name=GR	Name=2	NA	rs6969248	0.87	0.87	0.864	0.88778	0.8887	0.8522	0.9524	0.851	0.9274	0.89	0.84	0.95	0.83	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.389798	NA	NA	NA	NA	NA	0.877	NA	5.1113
1141	22	45767455	45767455	A	G	exonic	SMC1B	NA	synonymous SNV	SMC1B:NM_148674:exon14:c.T2209C:p.L737L	exonic	ENSG00000077935	NA	synonymous SNV	ENSG00000077935:ENST00000357450:exon14:c.T2209C:p.L737L,ENSG00000077935:ENST00000404354:exon14:c.T2209C:p.L737L	Score=487;Name=lod=127	NA	22q13.31	NA	NA	NA	NA	rs136569	0.65	0.65	0.666	0.71226	0.506	0.7054	0.5375	0.9546	0.728	0.49	0.67	0.58	0.94	0.5694	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.943605	NA	NA	0.480276	0.886464	NA	0.812	NA	5.1109906
1141	5	149636073	149636073	T	G	intronic	CAMK2A	NA	NA	NA	intronic	ENSG00000070808	NA	NA	NA	NA	NA	5q32	NA	Name=CTCF_(SC-5916),Rad21,ZBTB7A_(SC-34508),CTCF	Name=8	NA	rs10463293	0.54	0.54	0.579	0.551318	0.4503	0.5645	0.438	0.6657	0.5675	0.46	0.58	0.47	0.68	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.707374	NA	NA	0.438718	0.613439	NA	0.652	NA	5.110982
1141	2	132201582	132201582	A	G	ncRNA_exonic	LOC401010	NA	NA	NA	ncRNA_exonic	ENSG00000217950	NA	NA	NA	Score=423;Name=lod=70	NA	2q21.1	NA	NA	NA	NA	rs1806886	0.4	0.4	0.364	0.413938	0.2366	0.7589	0.5346	0.2958	0.3149	0.23	0.73	0.46	0.26	0.3194	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.45476	NA	NA	NA	NA	NA	0.319	NA	5.1106666
1141	22	19119938	19119938	G	A	exonic	TSSK2	NA	synonymous SNV	TSSK2:NM_053006:exon1:c.G1026A:p.R342R	exonic	ENSG00000206203	NA	synonymous SNV	ENSG00000206203:ENST00000399635:exon1:c.G1026A:p.R342R	NA	NA	22q11.21	NA	NA	NA	NA	rs1052773	0.2	0.2	0.187	0.215855	0.1809	0.1448	0.1527	0.2867	0.274	0.18	0.15	0.18	0.29	0.1934	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.086977	NA	0	0.181829	0.245794	NA	0.225	NA	5.1105376
1141	2	241834944	241834944	T	C	exonic	C2orf54	NA	synonymous SNV	C2orf54:NM_001085437:exon1:c.A471G:p.V157V	exonic	ENSG00000172478	NA	synonymous SNV	ENSG00000172478:ENST00000388934:exon1:c.A471G:p.V157V	Score=371;Name=lod=43	NA	2q37.3	NA	NA	NA	NA	rs4468809	0.52	0.52	0.543	0.527157	0.5179	0.4405	0.3473	0.7806	0.411	0.52	0.38	0.38	0.77	0.5466	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.281129	NA	0	0.491731	0.727831	NA	0.638	NA	5.1104356
1141	5	39394493	39394493	G	C	UTR5	DAB2	NM_001244871:c.-71C>G,NM_001343:c.-71C>G	NA	NA	UTR5	ENSG00000153071	ENST00000545653:c.-71C>G,ENST00000320816:c.-71C>G,ENST00000339788:c.-71C>G,ENST00000509337:c.-71C>G,ENST00000507539:c.-71C>G,ENST00000511792:c.-71C>G,ENST00000503513:c.-71C>G,ENST00000515700:c.-71C>G	NA	NA	Score=343;Name=lod=33	NA	5p13.1	NA	NA	NA	NA	rs1050903	0.23	0.23	0.214	0.219649	0.2237	0.2034	0.3141	0.1604	0.2454	0.22	0.23	0.31	0.18	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.290186	3.290186	NA	NA	NA	ID=COSN167444;OCCURENCE=1(large_intestine)	0.145	NA	5.1096334
1141	2	131688587	131688587	G	A	exonic	ARHGEF4	NA	synonymous SNV	ARHGEF4:NM_015320:exon3:c.G57A:p.A19A,ARHGEF4:NM_032995:exon3:c.G57A:p.A19A	exonic	ENSG00000136002	NA	synonymous SNV	ENSG00000136002:ENST00000409303:exon1:c.G57A:p.A19A,ENSG00000136002:ENST00000428230:exon2:c.G57A:p.A19A,ENSG00000136002:ENST00000438985:exon2:c.G597A:p.A199A,ENSG00000136002:ENST00000525839:exon2:c.G57A:p.A19A,ENSG00000136002:ENST00000326016:exon3:c.G57A:p.A19A,ENSG00000136002:ENST00000392953:exon3:c.G57A:p.A19A,ENSG00000136002:ENST00000409359:exon3:c.G2625A:p.A875A	NA	NA	2q21.1	NA	NA	NA	NA	rs6718816	0.22	0.22	0.271	0.257388	0.1829	0.1607	0.1297	0.4047	0.3252	0.2	0.14	0.14	0.43	0.1971	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.285077	NA	NA	0.177093	0.386291	NA	0.261	NA	5.1095736
1141	15	41483682	41483682	A	G	exonic	EXD1	NA	synonymous SNV	EXD1:NM_152596:exon8:c.T648C:p.P216P	exonic	ENSG00000178997	NA	synonymous SNV	ENSG00000178997:ENST00000314992:exon8:c.T648C:p.P216P,ENSG00000178997:ENST00000458580:exon10:c.T822C:p.P274P	NA	NA	15q15.1	NA	NA	NA	NA	rs1971131	0.3	0.3	0.31	0.341454	0.171	0.2788	0.2161	0.5817	0.3456	0.15	0.3	0.22	0.58	0.2258	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.546841	NA	NA	0.160698	0.513164	ID=COSM1129217;OCCURENCE=1(prostate)	0.348	NA	5.1091686
1141	9	22748135	22748135	A	G	ncRNA_intronic	FLJ35282	NA	NA	NA	ncRNA_exonic	ENSG00000236739	NA	NA	NA	Score=645;Name=lod=556	NA	9p21.3	NA	NA	NA	NA	rs842849	0.51	0.51	0.495	0.475439	0.5577	0.4544	0.6081	0.413	0.4029	0.56	0.49	0.6	0.39	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.008621	NA	NA	NA	NA	NA	0.529	NA	5.1089666
1141	17	37213252	37213252	T	C	upstream	LOC100131347	NA	NA	NA	upstream	ENSG00000263818	NA	NA	NA	NA	NA	17q12	NA	Name=Pol2-4H8,ZNF263,Egr-1,TBP,Nrf1,SRF,HEY1,YY1_(C-20),Mxi1_(bHLH),PU.1,Pol2,HMGN3,TAF1	Name=147	NA	rs4794799	0.5	0.5	0.437	0.536342	0.5577	0.503	0.6729	0.3888	0.6513	0.55	0.46	0.62	0.39	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.534701	NA	NA	NA	NA	NA	0.145	NA	5.1089666
1141	22	22664639	22664639	G	A	ncRNA_exonic	LOC96610	NA	NA	NA	ncRNA_exonic	ENSG00000236850	NA	NA	NA	Score=603;Name=lod=376	NA	22q11.22	NA	NA	NA	NA	rs9306349	0.49	0.49	0.436	0.53774	0.5577	0.4008	0.5115	0.6089	0.5808	0.53	0.38	0.46	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.236359	NA	NA	NA	NA	NA	NA	NA	5.1089666
1141	6	29012116	29012116	G	A	exonic	OR2W1	NA	synonymous SNV	OR2W1:NM_030903:exon1:c.C837T:p.T279T	exonic	ENSG00000204704	NA	synonymous SNV	ENSG00000204704:ENST00000377175:exon1:c.C837T:p.T279T	NA	NA	6p22.1	NA	NA	NA	NA	rs7341218	0.29	0.29	0.275	0.288339	0.1889	0.3929	0.2839	0.354	0.1973	0.16	0.41	0.3	0.34	0.2015	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.322034	NA	NA	0.167405	0.318001	NA	0.254	NA	5.1088616
1141	6	160225012	160225012	T	G	exonic	PNLDC1	NA	synonymous SNV	PNLDC1:NM_001271862:exon5:c.T264G:p.S88S,PNLDC1:NM_173516:exon5:c.T231G:p.S77S	exonic	ENSG00000146453	NA	synonymous SNV	ENSG00000146453:ENST00000275275:exon5:c.T231G:p.S77S,ENSG00000146453:ENST00000392167:exon5:c.T264G:p.S88S	Score=444;Name=lod=85	NA	6q25.3	NA	NA	NA	NA	rs35435543	0.37	0.37	0.342	0.3752	0.5109	0.1627	0.5865	0.236	0.4928	0.52	0.15	0.56	0.24	0.5017	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.233032	NA	NA	0.545581	0.271448	NA	0.297	NA	5.1084856
1141	6	169626244	169626244	T	C	intronic	THBS2	NA	NA	NA	ncRNA_intronic	ENSG00000226445	NA	NA	NA	NA	NA	6q27	NA	Name=CTCF	NA	NA	rs7454644	0.14	0.14	0.092	0.176717	0.0606	0.1071	0.0879	0.416	0.1074	0.06	0.1	0.07	0.36	0.1008	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.0192	NA	NA	0.063605	0.156151	NA	0.051	NA	5.1083283
1141	5	141337126	141337126	C	T	exonic	PCDH12	NA	synonymous SNV	PCDH12:NM_016580:exon1:c.G291A:p.L97L	exonic	ENSG00000113555	NA	synonymous SNV	ENSG00000113555:ENST00000231484:exon1:c.G291A:p.L97L	NA	NA	5q31.3	NA	NA	Name=18	NA	rs164076	0.58	0.58	0.549	0.591853	0.508	0.8492	0.6369	0.348	0.7106	0.51	0.86	0.61	0.34	0.5627	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.101712	NA	NA	0.487907	0.375851	NA	0.551	NA	5.1080596
1141	11	5020416	5020416	A	G	exonic	OR51L1	NA	synonymous SNV	OR51L1:NM_001004755:exon1:c.A204G:p.L68L	exonic	ENSG00000176798	NA	synonymous SNV	ENSG00000176798:ENST00000321543:exon1:c.A204G:p.L68L	Score=295;Name=lod=21	NA	11p15.4	Score=905;Name=V$YY1_01	NA	NA	NA	rs2445290	0.8	0.8	0.797	0.826278	0.8718	0.6696	0.8271	0.8752	0.8742	0.87	0.66	0.81	0.85	0.8348	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.170384	NA	NA	0.852257	0.853476	NA	0.862	NA	5.1078096
1141	5	159378159	159378159	G	T	intronic	ADRA1B	NA	NA	NA	ncRNA_exonic	ENSG00000248626	NA	NA	NA	Score=803;Name=lod=2455	NA	5q33.3	NA	NA	NA	NA	rs13171967	0.23	0.23	0.235	0.242212	0.2256	0.3105	0.1311	0.2663	0.2352	0.22	0.27	0.13	0.27	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.196502	NA	NA	NA	NA	NA	0.181	NA	5.1077333
1141	10	73558852	73558852	A	G	intronic	CDH23	NA	NA	NA	intronic	ENSG00000107736	NA	NA	NA	NA	NA	10q22.1	Score=771;Name=V$HEN1_01	NA	NA	NA	rs4747193	0.43	0.43	0.412	0.410743	0.2823	0.5972	0.3703	0.4599	0.3129	0.28	0.61	0.33	0.5	0.341	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.492191	NA	NA	0.268974	0.419881	NA	0.435	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000039261.1;CLNDSDB=.;CLNDSDBID=.	5.107726
1141	1	29475394	29475394	C	G	exonic	SRSF4	NA	nonsynonymous SNV	SRSF4:NM_005626:exon6:c.G1013C:p.G338A	exonic	ENSG00000116350	NA	nonsynonymous SNV	ENSG00000116350:ENST00000373795:exon6:c.G1013C:p.G338A	NA	NA	1p35.3	NA	NA	NA	NA	rs2230677	0.52	0.52	0.523	0.495208	0.7694	0.1528	0.5447	0.5598	0.4438	0.77	0.15	0.56	0.56	0.6586	0.8	1	T	0.0	B	0.0	B	0.674	N	1.000	P	0	N	2.64	T	-0.969	T	0.000	T	0.088	-0.681	1.034	-0.673	-0.178	0.426	2.466	-0.680963	NA	0.66	0.79786	0.609219	NA	0.536	NA	5.1074734
1141	10	116008464	116008464	T	A	UTR5	VWA2	NM_001272046:c.-9T>A	NA	NA	UTR5	ENSG00000165816	ENST00000603594:c.-9T>A,ENST00000392982:c.-9T>A	NA	NA	NA	NA	10q25.3	NA	Name=MafK_(ab50322)	NA	NA	rs9665610	0.08	0.08	0.08	0.0832668	0.0805	0.0585	0.0865	0.146	0.0245	0.08	0.06	0.09	0.1	0.0732	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.604033	NA	NA	0.072209	0.131639	NA	0.065	NA	5.1074244
1141	6	33555348	33555348	G	A	ncRNA_exonic	LINC00336	NA	NA	NA	ncRNA_exonic	ENSG00000197251	NA	NA	NA	NA	NA	6p21.31	NA	NA	Name=7	NA	rs4559081	0.12	0.12	0.106	0.0866613	0.2018	0.0546	0.1599	0.0091	0.0542	0.2	0.07	0.15	0.01	0.1705	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.335841	NA	NA	0.187209	0.036314	NA	0.094	NA	5.1071576
1141	7	129989878	129989878	T	C	exonic	CPA5	NA	synonymous SNV	CPA5:NM_001127442:exon4:c.T261C:p.S87S,CPA5:NM_080385:exon5:c.T261C:p.S87S,CPA5:NM_001127441:exon6:c.T261C:p.S87S	exonic	ENSG00000158525	NA	synonymous SNV	ENSG00000158525:ENST00000393213:exon3:c.T261C:p.S87S,ENSG00000158525:ENST00000431780:exon4:c.T261C:p.S87S,ENSG00000158525:ENST00000461828:exon4:c.T261C:p.S87S,ENSG00000158525:ENST00000463587:exon4:c.T261C:p.S87S,ENSG00000158525:ENST00000485477:exon4:c.T261C:p.S87S,ENSG00000158525:ENST00000466363:exon5:c.T261C:p.S87S,ENSG00000158525:ENST00000474905:exon5:c.T261C:p.S87S,ENSG00000158525:ENST00000355388:exon6:c.T261C:p.S87S	Score=487;Name=lod=127	NA	7q32.2	NA	NA	NA	NA	rs7808823	0.52	0.52	0.508	0.522963	0.5219	0.5675	0.6311	0.4539	0.4949	0.53	0.55	0.6	0.41	0.5282	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.662118	NA	NA	0.509767	0.468906	NA	0.384	NA	5.1067996
1141	1	246692028	246692028	T	C	intergenic	LOC255654,TFB2M	dist=4439;dist=11835	NA	NA	ncRNA_exonic	ENSG00000229112	NA	NA	NA	Score=403;Name=lod=58	NA	1q44	NA	NA	Name=3	NA	rs3124096	NA	NA	NA	0.83147	0.8936	0.9573	0.8934	0.7602	0.6902	NA	NA	NA	NA	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.168229	NA	NA	NA	NA	NA	0.754	NA	5.1064
1141	2	241808685	241808685	C	T	exonic	AGXT	NA	synonymous SNV	AGXT:NM_000030:exon2:c.C264T:p.A88A	exonic	ENSG00000172482	NA	synonymous SNV	ENSG00000172482:ENST00000307503:exon2:c.C264T:p.A88A	NA	NA	2q37.3	NA	NA	NA	NA	rs35698882	0.11	0.11	0.104	0.08127	0.2058	NA	0.1326	0.0363	0.0613	0.21	NA	0.14	0.05	0.1498	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.097696	NA	NA	0.204767	0.062188	NA	0.109	NA	5.1062996
1141	17	38911212	38911212	G	A	exonic	KRT25	NA	synonymous SNV	KRT25:NM_181534:exon1:c.C312T:p.N104N	exonic	ENSG00000204897	NA	synonymous SNV	ENSG00000204897:ENST00000312150:exon1:c.C312T:p.N104N	NA	NA	17q21.2	Score=836;Name=V$HTF_01	NA	NA	NA	rs12951078	0.52	0.52	0.504	0.467452	0.506	0.8224	0.5735	0.1641	0.3967	0.51	0.83	0.53	0.16	0.5219	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.033388	NA	NA	0.532791	0.226055	NA	0.377	NA	5.1059756
1141	10	101293035	101293035	C	A	exonic	NKX2-3	NA	synonymous SNV	NKX2-3:NM_145285:exon1:c.C147A:p.A49A	exonic	ENSG00000119919	NA	synonymous SNV	ENSG00000119919:ENST00000344586:exon1:c.C147A:p.A49A	NA	NA	10q24.2	NA	Name=SUZ12	NA	NA	rs41290504	0.52	0.52	0.526	0.551318	0.503	0.5546	0.5994	0.5628	0.5481	0.5	0.52	0.55	0.51	0.5375	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.480797	NA	NA	0.520704	0.570658	ID=COSM426905;OCCURENCE=1(breast)	0.333	NA	5.1054626
1141	16	75186727	75186727	G	A	intronic	ZFP1	NA	NA	NA	intronic	ENSG00000184517	NA	NA	NA	NA	NA	16q23.1	NA	Name=SP1,PU.1,BCL11A,IRF4_(M-17),EBF1_(C-8),BATF,EBF,NFKB,BCL3	Name=8	NA	rs11859007	0.78	0.78	0.775	0.74361	0.8946	0.8016	0.7536	0.562	0.7669	0.9	0.8	0.79	0.56	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.470736	NA	NA	NA	NA	NA	0.812	NA	5.1054
1142	1	26357667	26357667	G	A	exonic	EXTL1	NA	synonymous SNV	EXTL1:NM_004455:exon5:c.G1146A:p.L382L	exonic	ENSG00000158008	NA	synonymous SNV	ENSG00000158008:ENST00000374280:exon5:c.G1146A:p.L382L	NA	NA	1p36.11	NA	NA	NA	NA	rs11247848	0.17	0.17	0.165	0.149361	0.1859	0.1845	0.1484	0.1513	0.0736	0.18	0.2	0.17	0.14	0.1731	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.690651	NA	NA	0.203605	0.159328	ID=COSM146451;OCCURENCE=1(stomach)	0.268	NA	5.1040616
1142	12	51281432	51281432	G	A	UTR3	TMPRSS12	NM_182559:c.*136G>A	NA	NA	UTR3	ENSG00000186452	ENST00000551456:c.*2093G>A,ENST00000398458:c.*136G>A	NA	NA	NA	NA	12q13.12	Score=898;Name=V$FOXJ2_02	NA	NA	NA	rs3752667	0.22	0.22	0.205	0.230831	0.2296	0.3978	0.2478	0.0946	0.2321	0.2	0.37	0.25	0.07	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.858062	NA	NA	NA	NA	NA	0.174	NA	5.1037334
1142	X	24807159	24807159	C	T	intronic	POLA1	NA	NA	NA	ncRNA_exonic	ENSG00000232472	NA	NA	NA	NA	NA	Xp22.11	NA	NA	NA	NA	rs201154367	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2296	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.677401	2.677401	NA	NA	NA	NA	NA	CLINSIG=other;CLNDBN=Malignant_melanoma;CLNREVSTAT=not;CLNACC=RCV000073158.2;CLNDSDB=MedGen:SNOMED_CT;CLNDSDBID=C0025202:2092003	5.1037333
1142	7	100072031	100072031	T	C	exonic	TSC22D4	NA	synonymous SNV	TSC22D4:NM_030935:exon3:c.A795G:p.P265P	exonic	ENSG00000166925	NA	synonymous SNV	ENSG00000166925:ENST00000300181:exon3:c.A795G:p.P265P,ENSG00000166925:ENST00000393991:exon3:c.A78G:p.P26P	NA	NA	7q22.1	NA	NA	NA	NA	rs7809801	0.15	0.15	0.136	0.16254	0.1938	0.0218	0.134	0.3011	0.1084	0.19	0.01	0.12	0.27	0.1709	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.93533	NA	NA	0.198488	0.291875	NA	0.275	NA	5.1034786
1142	6	29894250	29894250	T	A	upstream	HCG4B	NA	NA	NA	ncRNA_exonic	ENSG00000227262,ENSG00000230795	NA	NA	NA	NA	NA	6p22.1	NA	Name=YY1_(C-20),YY1	NA	NA	rs2240073	0.1	0.1	0.059	0.120008	0.0636	0.3175	0.0476	0.003	0.184	0.06	0.28	0.05	0.002	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.67649	NA	NA	NA	NA	NA	0.087	NA	5.1030666
1142	6	29894269	29894269	T	C	upstream	HCG4B	NA	NA	NA	ncRNA_exonic	ENSG00000227262,ENSG00000230795	NA	NA	NA	NA	NA	6p22.1	NA	Name=YY1_(C-20),YY1	NA	NA	rs2074485	0.1	0.1	0.045	0.120008	0.0636	0.3175	0.0476	0.003	0.184	0.06	0.28	0.05	0.002	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.402957	1.402957	NA	NA	NA	NA	0.08	NA	5.1030666
1142	6	29894332	29894332	T	A	upstream	HCG4B	NA	NA	NA	ncRNA_exonic	ENSG00000227262	NA	NA	NA	NA	NA	6p22.1	NA	Name=YY1_(C-20),YY1	NA	NA	rs191134254	0.1	0.1	NA	0.120008	0.0636	0.3165	0.0476	0.003	0.1851	0.06	0.27	0.05	0.002	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.302336	NA	NA	NA	NA	NA	NA	NA	5.1030666
1142	6	29894334	29894334	G	A	upstream	HCG4B	NA	NA	NA	ncRNA_exonic	ENSG00000227262	NA	NA	NA	NA	NA	6p22.1	NA	Name=YY1_(C-20),YY1	NA	NA	rs2240072	0.1	0.1	NA	0.120008	0.0636	0.3165	0.0476	0.003	0.1851	0.06	0.27	0.05	0.0041	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.842704	NA	NA	NA	NA	NA	NA	NA	5.1030666
1142	11	15199957	15199957	T	C	exonic	INSC	NA	synonymous SNV	INSC:NM_001031853:exon5:c.T684C:p.G228G,INSC:NM_001042536:exon5:c.T543C:p.G181G	exonic	ENSG00000188487	NA	synonymous SNV	ENSG00000188487:ENST00000525218:exon4:c.T543C:p.G181G,ENSG00000188487:ENST00000528567:exon4:c.T543C:p.G181G,ENSG00000188487:ENST00000530161:exon4:c.T543C:p.G181G,ENSG00000188487:ENST00000379554:exon5:c.T684C:p.G228G,ENSG00000188487:ENST00000379556:exon5:c.T543C:p.G181G,ENSG00000188487:ENST00000424273:exon5:c.T543C:p.G181G	Score=572;Name=lod=282	NA	11p15.2	Score=749;Name=V$NRSF_01	NA	NA	NA	rs1714376	0.89	0.89	0.871	0.893171	0.8588	0.9762	0.8991	0.8389	0.9121	0.85	0.98	0.91	0.83	0.8634	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.504608	1.504608	NA	0.841997	0.835794	NA	0.87	NA	5.1024696
1142	13	25592111	25592111	C	G	intergenic	TPTE2P1,PABPC3	dist=49504;dist=78165	NA	NA	downstream	ENSG00000269099	NA	NA	NA	NA	NA	13q12.13	NA	Name=Pol2,HA-E2F1,ZNF263	Name=27	NA	rs9578814	0.45	0.45	0.41	0.466254	0.3976	0.4623	0.4553	0.5303	0.4622	0.4	0.45	0.45	0.53	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.72476	NA	NA	NA	NA	NA	0.406	NA	5.1024
1142	18	5956116	5956116	G	A	UTR3	L3MBTL4	NM_173464:c.*103C>T	NA	NA	ncRNA_exonic	ENSG00000265487	NA	NA	NA	NA	NA	18p11.31	NA	NA	Name=12	NA	rs3737351	0.38	0.38	0.367	0.384784	0.3976	0.4742	0.2723	0.2927	0.4836	0.41	0.47	0.28	0.3	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.760484	NA	NA	NA	NA	NA	0.362	NA	5.1024
1142	18	5956145	5956145	T	C	UTR3	L3MBTL4	NM_173464:c.*74A>G	NA	NA	ncRNA_exonic	ENSG00000265487	NA	NA	NA	NA	NA	18p11.31	NA	NA	Name=12	NA	rs3737352	0.38	0.38	0.352	0.384784	0.3976	0.4742	0.2723	0.2927	0.4836	0.41	0.47	0.28	0.3	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.291632	1.291632	NA	NA	NA	NA	0.362	NA	5.1024
1142	22	30127367	30127367	G	T	UTR3	CABP7	NM_182527:c.*1809G>T	NA	NA	UTR3	ENSG00000100314	ENST00000216144:c.*1809G>T	NA	NA	Score=251;Name=lod=14	NA	22q12.2	NA	NA	NA	NA	rs2232903	0.05	0.05	0.03	0.0621006	0.0696	0.0198	0.098	0.025	0.1227	0.08	0.01	0.08	0.03	0.0845	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.851094	1.851094	NA	0.077093	0.035406	NA	0.043	NA	5.1021404
1142	12	109907664	109907664	A	T	intronic	KCTD10	NA	NA	NA	UTR3	ENSG00000110906	ENST00000537165:c.*1327T>A	NA	NA	NA	NA	12q24.11	NA	NA	Name=41	NA	rs79210497	0.05	0.05	0.052	0.0453275	0.0646	0.0823	0.0216	0.0053	0.0583	0.08	0.08	0.03	0.0041	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.343823	1.343823	NA	NA	NA	NA	0.014	NA	5.1020667
1142	12	1987605	1987605	C	T	intronic	CACNA2D4	NA	NA	NA	exonic	ENSG00000151062	NA	nonsynonymous SNV	ENSG00000151062:ENST00000444595:exon16:c.G1647A:p.M549I	NA	NA	12p13.33	NA	NA	NA	NA	rs79680317	0.05	0.05	0.062	0.0634984	0.0099	0.0099	0.0187	0.1732	0.0573	0.01	0.02	0.02	0.17	0.0408	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.587277	1.587277	0.01	0.013926	0.121565	NA	0.029	NA	5.1020407
1142	15	25307601	25307601	A	G	downstream	SNORD116-5,SNORD116-7	NA	NA	NA	ncRNA_intronic	ENSG00000224078	NA	NA	NA	NA	NA	15q11.2	NA	Name=ZNF274	NA	NA	rs112765442	0.04	0.04	0.04	0.058107	0.0159	NA	0.0288	0.1672	0.0348	0.02	NA	0.02	0.15	0.031	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.030869	NA	NA	0.01783	0.139269	NA	0.014	NA	5.1019366
1142	12	51685831	51685831	T	C	exonic	BIN2	NA	synonymous SNV	BIN2:NM_016293:exon10:c.A1059G:p.E353E	exonic	ENSG00000110934	NA	synonymous SNV	ENSG00000110934:ENST00000452142:exon9:c.A963G:p.E321E,ENSG00000110934:ENST00000604560:exon9:c.A978G:p.E326E,ENSG00000110934:ENST00000267012:exon10:c.A1059G:p.E353E,ENSG00000110934:ENST00000544402:exon10:c.A981G:p.E327E	NA	NA	12q13.13	NA	Name=CTCF	Name=18	NA	rs3210837	0.79	0.79	0.762	0.78115	0.8598	0.8433	0.8631	0.5643	0.8712	0.85	0.84	0.83	0.6	0.8428	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.56655	NA	NA	0.862442	0.591693	NA	0.812	NA	5.1016246
1142	15	25307590	25307590	G	T	downstream	SNORD116-5,SNORD116-7	NA	NA	NA	ncRNA_intronic	ENSG00000224078	NA	NA	NA	NA	NA	15q11.2	NA	Name=ZNF274	NA	NA	rs113295488	0.05	0.05	0.045	0.0613019	0.0159	NA	0.0303	0.1785	0.0348	0.02	NA	0.02	0.16	0.0315	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.920451	NA	NA	0.01783	0.156963	NA	0.029	NA	5.1014366
1142	1	47717189	47717189	A	G	exonic	STIL	NA	synonymous SNV	STIL:NM_001048166:exon17:c.T3486C:p.P1162P,STIL:NM_003035:exon17:c.T3483C:p.P1161P	exonic	ENSG00000123473	NA	synonymous SNV	ENSG00000123473:ENST00000243182:exon17:c.T3483C:p.P1161P,ENSG00000123473:ENST00000337817:exon17:c.T3483C:p.P1161P,ENSG00000123473:ENST00000371877:exon17:c.T3486C:p.P1162P,ENSG00000123473:ENST00000396221:exon17:c.T3432C:p.P1144P,ENSG00000123473:ENST00000360380:exon18:c.T3483C:p.P1161P	NA	NA	1p33	NA	NA	NA	NA	rs2758735	0.41	0.41	0.363	0.393371	0.5427	0.4296	0.4078	0.1218	0.5593	0.53	0.42	0.45	0.16	0.4979	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.633806	NA	NA	0.525	0.181117	NA	0.413	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000080044.1|RCV000128291.1;CLNDSDB=.|.;CLNDSDBID=.|.	5.1010666
1142	3	156528265	156528265	C	T	ncRNA_exonic	PA2G4P4	NA	NA	NA	ncRNA_exonic	ENSG00000230457	NA	NA	NA	Score=825;Name=lod=3005	NA	3q25.31	NA	NA	NA	NA	rs10936037	0.58	0.58	0.517	0.594449	0.5656	0.8433	0.6513	0.323	0.6943	0.52	0.83	0.64	0.33	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.427717	1.427717	NA	NA	NA	NA	0.551	NA	5.1010666
1142	19	1014377	1014377	A	G	exonic	TMEM259	NA	synonymous SNV	TMEM259:NM_001033026:exon2:c.T321C:p.R107R,TMEM259:NM_033420:exon2:c.T321C:p.R107R	exonic	ENSG00000182087	NA	synonymous SNV	ENSG00000182087:ENST00000333175:exon2:c.T321C:p.R107R,ENSG00000182087:ENST00000356663:exon2:c.T321C:p.R107R	NA	NA	19p13.3	NA	NA	NA	NA	rs1058506	0.19	0.19	0.188	0.190695	0.2028	0.1141	0.121	0.2315	0.2515	0.22	0.11	0.14	0.27	0.1858	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.385962	NA	NA	0.177134	0.189827	NA	0.203	NA	5.1009326
1142	1	94057720	94057720	T	A	ncRNA_exonic	LOC100129046	NA	NA	NA	intronic	ENSG00000137936	NA	NA	NA	NA	NA	1p22.1	NA	Name=FOXA1_(SC-101058),p300,USF-1,RXRA,FOXA1_(C-20),Pol2,KAP1	NA	NA	rs236326	0.33	0.33	0.368	0.342452	0.2326	0.1379	0.2046	0.8351	0.0982	0.23	0.13	0.22	0.81	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.511287	NA	NA	NA	NA	NA	0.391	NA	5.1007333
1142	5	178336739	178336739	G	A	intronic	ZFP2	NA	NA	NA	ncRNA_exonic	ENSG00000213328	NA	NA	NA	Score=750;Name=lod=1484	NA	5q35.3	NA	NA	NA	NA	rs61747996	0.15	0.15	0.134	0.141374	0.2326	0.0883	0.1268	0.1172	0.1452	0.23	0.08	0.15	0.11	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.596818	2.596818	NA	NA	NA	NA	0.109	NA	5.1007333
1142	16	89294697	89294697	C	T	exonic	ZNF778	NA	synonymous SNV	ZNF778:NM_182531:exon6:c.C1917T:p.H639H,ZNF778:NM_001201407:exon7:c.C2001T:p.H667H	exonic	ENSG00000170100	NA	synonymous SNV	ENSG00000170100:ENST00000306502:exon5:c.C1791T:p.H597H,ENSG00000170100:ENST00000433976:exon6:c.C1917T:p.H639H	Score=412;Name=lod=63	NA	16q24.3	NA	Name=SETDB1	NA	NA	rs60437616	0.75	0.75	0.747	0.700479	0.8738	0.7123	0.8184	0.4947	0.7045	0.87	0.72	0.87	0.54	0.8083	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.008445	NA	NA	0.883845	0.561528	NA	0.703	NA	5.1007216
1142	19	53960224	53960224	T	C	UTR3	ZNF761	NM_001008401:c.*222T>C	NA	NA	ncRNA_exonic	ENSG00000160336	NA	NA	NA	Score=369;Name=lod=42	NA	19q13.42	NA	NA	NA	NA	rs2708741	0.38	0.38	0.335	0.391773	0.3996	0.2401	0.5375	0.4123	0.409	0.4	0.25	0.54	0.37	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.052481	NA	NA	NA	NA	NA	0.384	NA	5.1004
1142	19	53960338	53960338	A	G	UTR3	ZNF761	NM_001008401:c.*336A>G	NA	NA	ncRNA_exonic	ENSG00000160336	NA	NA	NA	Score=340;Name=lod=32	NA	19q13.42	NA	NA	NA	NA	rs2708740	0.37	0.37	0.331	0.391973	0.3996	0.2401	0.5375	0.4123	0.41	0.4	0.25	0.54	0.36	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.573658	NA	NA	NA	NA	NA	0.384	NA	5.1004
1142	8	144902682	144902682	T	C	intronic	PUF60	NA	NA	NA	intronic	ENSG00000179950	NA	NA	NA	Score=780;Name=lod=1980	NA	8q24.3	Score=762;Name=V$PAX5_01	NA	NA	NA	rs4874103	0.9	0.9	0.871	0.901158	0.8996	0.9762	0.9236	0.7844	0.9673	0.9	0.98	0.89	0.81	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.771474	3.771474	NA	NA	NA	NA	0.768	NA	5.1004
1142	16	87447903	87447903	C	T	intronic	ZCCHC14	NA	NA	NA	intronic	ENSG00000140948	NA	NA	NA	NA	NA	16q24.2	NA	Name=STAT3,BATF	Name=9	NA	rs7206322	0.82	0.82	0.89	0.955272	0.8996	0.9931	0.9481	0.9667	0.9632	0.79	0.88	0.85	0.77	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.365516	NA	NA	NA	NA	NA	0.21	NA	5.1004
1142	9	104324545	104324545	G	A	exonic	RNF20	NA	synonymous SNV	RNF20:NM_019592:exon20:c.G2769A:p.P923P	exonic	ENSG00000155827	NA	synonymous SNV	ENSG00000155827:ENST00000389120:exon20:c.G2769A:p.P923P	NA	NA	9q31.1	NA	NA	NA	NA	rs10521057	0.18	0.18	0.185	0.185304	0.1938	0.3562	0.0865	0.0038	0.316	0.19	0.35	0.09	0.01	0.1891	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.110893	NA	NA	0.18407	0.040626	ID=COSM455064;OCCURENCE=1(breast)	0.145	NA	5.0996966
1142	1	100111956	100111956	A	G	intronic	PALMD	NA	NA	NA	intronic	ENSG00000099260	NA	NA	NA	NA	NA	1p21.2	NA	Name=Pol2,Pol2(b)	Name=99	NA	rs834997	0.25	0.25	0.258	0.257588	0.327	0.0139	0.1643	0.4259	0.2761	0.34	0.01	0.21	0.41	0.2672	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.091221	2.091221	NA	0.307209	0.389015	NA	0.326	NA	5.098591
1142	7	107849908	107849908	G	A	exonic	NRCAM	NA	synonymous SNV	NRCAM:NM_001037132:exon9:c.C1032T:p.N344N,NRCAM:NM_001193583:exon11:c.C975T:p.N325N,NRCAM:NM_001193584:exon11:c.C975T:p.N325N,NRCAM:NM_005010:exon11:c.C1014T:p.N338N,NRCAM:NM_001193582:exon12:c.C1032T:p.N344N	exonic	ENSG00000091129	NA	synonymous SNV	ENSG00000091129:ENST00000417701:exon9:c.C1014T:p.N338N,ENSG00000091129:ENST00000425651:exon9:c.C1032T:p.N344N,ENSG00000091129:ENST00000351718:exon11:c.C1014T:p.N338N,ENSG00000091129:ENST00000379024:exon11:c.C975T:p.N325N,ENSG00000091129:ENST00000379028:exon12:c.C1032T:p.N344N,ENSG00000091129:ENST00000413765:exon12:c.C975T:p.N325N,ENSG00000091129:ENST00000379022:exon13:c.C1032T:p.N344N	Score=547;Name=lod=223	NA	7q31.1	NA	NA	NA	NA	rs1269621	0.61	0.61	0.605	0.584864	0.508	0.8155	0.6066	0.5408	0.4703	0.51	0.81	0.58	0.57	0.5528	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.737616	NA	NA	0.507907	0.547208	NA	0.486	NA	5.0979596
1142	6	32164869	32164869	G	C	intronic	NOTCH4	NA	NA	NA	intronic	ENSG00000204301	NA	NA	NA	NA	NA	6p21.32	NA	Name=GATA-1	Name=2	NA	rs2071280	0.24	0.24	0.24	0.230232	0.2992	0.1677	0.2594	0.1808	0.2699	0.29	0.19	0.28	0.18	0.3066	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.206395	NA	NA	0.296419	0.173179	NA	0.304	NA	5.097781
1142	21	34668747	34668747	A	G	UTR3	IL10RB	NM_000628:c.*85A>G	NA	NA	UTR3	ENSG00000243646	ENST00000290200:c.*85A>G	NA	NA	NA	NA	21q22.11	NA	Name=PAX5-N19,PAX5-C20	Name=6	NA	rs3171425	0.58	0.58	0.535	0.56849	0.5994	0.7569	0.5576	0.3086	0.7014	0.61	0.73	0.59	0.33	0.6362	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.294814	NA	NA	NA	NA	NA	0.587	NA	5.0977334
1142	9	131585069	131585069	A	G	exonic	C9orf114	NA	nonsynonymous SNV	C9orf114:NM_016390:exon12:c.T1106C:p.I369T	exonic	ENSG00000198917	NA	nonsynonymous SNV	ENSG00000198917:ENST00000467582:exon3:c.T199C:p.S67P,ENSG00000198917:ENST00000361256:exon12:c.T1106C:p.I369T	NA	NA	9q34.11	NA	NA	NA	NA	rs2280843	0.68	0.68	0.627	0.603834	0.7465	0.7331	0.7853	0.3086	0.5941	0.79	0.75	0.77	0.35	0.7422	0.79	0.77	T	0.0	B	0.0	B	.	.	1.000	P	-1.39	N	2.02	T	-0.979	T	0.000	T	0.055	-0.389	2.173	-0.317	-0.209	-0.084	0.474	-0.389315	NA	0	0.747203	0.377165	NA	0.645	NA	5.0974304
1142	11	50379403	50379403	T	C	ncRNA_exonic	LOC646813	NA	NA	NA	ncRNA_exonic	ENSG00000214883	NA	NA	NA	Score=598;Name=lod=360	NA	11p11.12	NA	NA	NA	NA	rs692607	0.51	0.51	0.485	0.500599	0.5696	0.5546	0.6297	0.3464	0.4908	0.57	0.55	0.64	0.27	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.383873	NA	NA	NA	NA	NA	0.507	NA	5.0970666
1142	11	65161129	65161129	C	T	exonic	FRMD8	NA	synonymous SNV	FRMD8:NM_031904:exon4:c.C339T:p.D113D	exonic	ENSG00000126391	NA	synonymous SNV	ENSG00000126391:ENST00000355991:exon3:c.C171T:p.D57D,ENSG00000126391:ENST00000533782:exon3:c.C171T:p.D57D,ENSG00000126391:ENST00000317568:exon4:c.C339T:p.D113D	NA	NA	11q13.1	Score=793;Name=V$PAX5_01	NA	NA	NA	rs2073800	0.32	0.32	0.316	0.287939	0.5467	0.2698	0.2911	0.028	0.3896	0.55	0.27	0.32	0.05	0.4642	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.968791	NA	NA	0.559008	0.115402	NA	0.362	NA	5.0967586
1142	12	68715417	68715417	G	A	intronic	MDM1	NA	NA	NA	intronic	ENSG00000111554	NA	NA	NA	Score=529;Name=lod=189	NA	12q15	Score=825;Name=V$OCT1_04	NA	NA	NA	rs7964052	0.22	0.22	0.203	0.216054	0.3052	0.1736	0.2176	0.0893	0.3384	0.31	0.17	0.27	0.12	0.2949	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.718213	NA	NA	0.303189	0.138346	NA	0.261	NA	5.096711
1142	7	77200392	77200392	A	T	intronic	PTPN12	NA	NA	NA	intronic	ENSG00000127947	NA	NA	NA	Score=681;Name=lod=783	NA	7q11.23	Score=788;Name=V$MEF2_03	NA	NA	NA	rs17155183	0.24	0.24	0.213	0.254193	0.3091	0.1786	0.2392	0.2587	0.2802	0.3	0.19	0.2	0.26	0.3095	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.505408	1.505408	NA	0.284932	0.255338	NA	0.275	NA	5.096468
1142	9	14737506	14737506	T	G	exonic	FREM1	NA	nonsynonymous SNV	FREM1:NM_001177704:exon14:c.A2036C:p.Q679P,FREM1:NM_144966:exon38:c.A6428C:p.Q2143P	exonic	ENSG00000164946	NA	nonsynonymous SNV	ENSG00000164946:ENST00000380894:exon14:c.A2036C:p.Q679P,ENSG00000164946:ENST00000380880:exon37:c.A6428C:p.Q2143P,ENSG00000164946:ENST00000380881:exon38:c.A6431C:p.Q2144P,ENSG00000164946:ENST00000422223:exon38:c.A6428C:p.Q2143P	NA	NA	9p22.3	NA	NA	NA	NA	rs10961689	0.7	0.7	0.768	0.735024	0.7654	0.7808	0.7392	0.7632	0.6155	0.69	0.73	0.71	0.69	0.7385	0.79	0.28	T	0.004	B	0.004	B	0.195	N	1.000	P	0.95	L	2.35	T	-1.055	T	0.000	T	0.215	0.644	7.459	-0.727	0.139	-0.444	2.125	0.644301	NA	0.31	0.733826	0.793176	NA	0.717	NA	5.0956074
1142	12	119632713	119632713	C	T	downstream	HSPB8	NA	NA	NA	ncRNA_exonic	ENSG00000213144	NA	NA	NA	Score=686;Name=lod=822	NA	12q24.23	NA	NA	NA	NA	rs11064704	0.09	0.09	0.075	0.109026	0.0716	0.2292	0.0548	0.0303	0.1687	0.06	0.2	0.04	0.03	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.952844	NA	NA	NA	NA	NA	0.101	NA	5.0950666
1143	16	53404203	53404203	C	A	exonic	LOC643802	NA	nonsynonymous SNV	LOC643802:NM_001207030:exon2:c.G275T:p.G92V	ncRNA_exonic	ENSG00000260078	NA	NA	NA	Score=533;Name=lod=195	NA	16q12.2	NA	NA	NA	NA	rs10775327	0.73	0.73	0.714	0.732827	0.7187	0.9196	0.7118	0.6135	0.7311	0.71	0.91	0.7	0.57	0.6868	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.915282	NA	0.05	NA	NA	NA	0.703	NA	5.0945
1143	1	206328803	206328803	T	C	exonic	CTSE	NA	synonymous SNV	CTSE:NM_001910:exon7:c.T870C:p.P290P	exonic	ENSG00000196188	NA	synonymous SNV	ENSG00000196188:ENST00000358184:exon7:c.T870C:p.P290P,ENSG00000196188:ENST00000361052:exon7:c.T885C:p.P295P	NA	NA	1q32.1	NA	NA	NA	NA	rs41302235	0.2	0.2	0.197	0.184505	0.2107	0.0169	0.1671	0.3911	0.0634	0.21	0.01	0.2	0.4	0.1743	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.353989	2.353989	NA	0.187326	0.386064	NA	0.275	NA	5.0943406
1143	4	186112111	186112111	G	A	exonic	KIAA1430	NA	synonymous SNV	KIAA1430:NM_020827:exon2:c.C240T:p.P80P	exonic	ENSG00000164323	NA	synonymous SNV	ENSG00000164323:ENST00000296775:exon2:c.C240T:p.P80P,ENSG00000164323:ENST00000458385:exon2:c.C240T:p.P80P,ENSG00000164323:ENST00000514798:exon2:c.C240T:p.P80P,ENSG00000164323:ENST00000503223:exon3:c.C240T:p.P80P	NA	NA	4q35.1	NA	Name=NFKB,PU.1	NA	NA	rs3108237	0.54	0.54	0.537	0.540935	0.501	0.6012	0.5533	0.503	0.5624	0.49	0.64	0.51	0.51	0.5317	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.325659	NA	NA	0.539863	0.551443	NA	0.63	NA	5.0941036
1143	9	22012422	22012422	G	A	ncRNA_intronic	CDKN2B-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000215221	NA	NA	NA	Score=733;Name=lod=1268	NA	9p21.3	NA	NA	NA	NA	rs545226	0.62	0.62	0.64	0.646965	0.5726	0.4048	0.6167	0.9289	0.6135	0.58	0.44	0.58	0.91	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.746366	NA	NA	NA	NA	NA	0.725	NA	5.0940666
1143	19	20807438	20807438	A	G	exonic	ZNF626	NA	synonymous SNV	ZNF626:NM_001076675:exon4:c.T1245C:p.H415H	exonic	ENSG00000188171	NA	synonymous SNV	ENSG00000188171:ENST00000601440:exon4:c.T1245C:p.H415H	Score=336;Name=lod=31	NA	19p12	NA	Name=ZNF274	NA	NA	rs62107362	0.8	0.8	0.79	0.753994	0.8678	0.7569	0.8545	0.5794	0.7986	0.88	0.83	0.9	0.58	0.8343	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.946226	NA	NA	0.870597	0.643024	ID=COSM1391936;OCCURENCE=1(large_intestine)	0.167	NA	5.0939696
1143	10	44094186	44094186	C	T	intergenic	ZNF239,ZNF485	dist=24120;dist=7669	NA	NA	intergenic	ENSG00000196793,ENSG00000232004	dist=24120;dist=6105	NA	NA	Score=670;Name=lod=702	NA	10q11.21	NA	NA	Name=44	NA	rs10793447	0.4	0.4	0.36	0.379593	0.2396	0.751	0.4092	0.236	0.3139	0.24	0.77	0.39	0.22	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.313416	1.313416	NA	NA	NA	NA	0.319	NA	5.0937334
1143	5	74095419	74095419	G	A	intronic	FAM169A	NA	NA	NA	ncRNA_exonic	ENSG00000250071	NA	NA	NA	Score=772;Name=lod=1827	NA	5q13.3	NA	NA	NA	NA	rs6859014	0.36	0.36	0.359	0.382588	0.2396	0.2103	0.3357	0.7542	0.2382	0.22	0.19	0.37	0.77	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.540075	1.540075	NA	NA	NA	NA	0.478	NA	5.0937333
1143	1	152276871	152276871	A	G	exonic	FLG	NA	synonymous SNV	FLG:NM_002016:exon3:c.T10491C:p.D3497D	exonic	ENSG00000143631	NA	synonymous SNV	ENSG00000143631:ENST00000368799:exon3:c.T10491C:p.D3497D	NA	NA	1q21.3	NA	NA	NA	NA	rs3126066	0.38	0.38	0.348	0.447085	0.1471	0.6448	0.4395	0.5204	0.4581	0.15	0.61	0.34	0.49	0.2779	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.231061	NA	NA	0.148476	0.463005	NA	0.116	NA	5.0931906
1143	22	36556964	36556964	C	T	UTR5	APOL3	NM_145640:c.-25G>A	NA	NA	UTR5	ENSG00000128284	ENST00000397293:c.-11861G>A,ENST00000397289:c.-25G>A,ENST00000422426:c.-25G>A,ENST00000432700:c.-25G>A,ENST00000349314:c.-25G>A	NA	NA	NA	NA	22q12.3	NA	Name=NFKB,IRF1,Pol2,PRDM1_(Val90)	Name=97	NA	rs916334	0.47	0.47	0.431	0.450879	0.3897	0.8403	0.5965	0.0545	0.545	0.39	0.85	0.57	0.07	0.4677	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.002002	NA	NA	0.382907	0.109169	NA	0.29	NA	5.0930264
1143	11	56503873	56503873	C	T	intronic	OR8U8	NA	NA	NA	ncRNA_exonic	ENSG00000254953	NA	NA	NA	Score=395;Name=lod=54	NA	11q12.1	NA	NA	NA	NA	rs17151047	0.34	0.34	0.277	0.366414	0.2406	0.619	0.4914	0.1029	0.5031	0.23	0.61	0.46	0.12	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.296379	1.296379	NA	NA	NA	NA	0.297	NA	5.0927333
1143	11	6477831	6477831	C	T	exonic	TRIM3	NA	synonymous SNV	TRIM3:NM_001248007:exon5:c.G768A:p.P256P,TRIM3:NM_001248006:exon6:c.G1125A:p.P375P,TRIM3:NM_033278:exon6:c.G1125A:p.P375P,TRIM3:NM_006458:exon7:c.G1125A:p.P375P	exonic	ENSG00000110171	NA	synonymous SNV	ENSG00000110171:ENST00000536344:exon5:c.G768A:p.P256P,ENSG00000110171:ENST00000345851:exon6:c.G1125A:p.P375P,ENSG00000110171:ENST00000525074:exon6:c.G1125A:p.P375P,ENSG00000110171:ENST00000537602:exon6:c.G891A:p.P297P,ENSG00000110171:ENST00000359518:exon7:c.G1125A:p.P375P	NA	NA	11p15.4	NA	NA	NA	NA	rs10606	0.16	0.16	0.18	0.1877	0.1849	0.0188	0.1772	0.2973	0.2239	0.19	0.02	0.15	0.3	0.1867	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.446306	NA	NA	0.20318	0.287506	ID=COSM330242;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.304	NA	5.0918866
1143	12	19610213	19610213	C	T	intronic	AEBP2	NA	NA	NA	ncRNA_exonic	ENSG00000245205	NA	NA	NA	Score=783;Name=lod=2035	NA	12p12.3	NA	NA	NA	NA	rs7966663	0.31	0.31	0.322	0.32508	0.2416	0.3036	0.2118	0.5461	0.2147	0.25	0.27	0.25	0.49	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.019886	NA	NA	NA	NA	NA	0.254	NA	5.0917333
1143	1	248814126	248814126	G	A	exonic	OR2T27	NA	synonymous SNV	OR2T27:NM_001001824:exon1:c.C60T:p.N20N	exonic	ENSG00000187701	NA	synonymous SNV	ENSG00000187701:ENST00000344889:exon1:c.C60T:p.N20N	NA	NA	1q44	NA	NA	NA	NA	rs1416992	0.67	0.67	0.664	NA	NA	NA	NA	NA	NA	0.59	0.88	0.6	0.61	0.5751	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.663997	NA	NA	NA	NA	NA	0.109	NA	5.0915666
1143	11	56757021	56757021	G	A	exonic	OR5AK2	NA	synonymous SNV	OR5AK2:NM_001005323:exon1:c.G633A:p.G211G	exonic	ENSG00000181273	NA	synonymous SNV	ENSG00000181273:ENST00000326855:exon1:c.G633A:p.G211G	NA	NA	11q12.1	NA	NA	NA	NA	rs61886711	0.17	0.17	0.189	0.163139	0.2177	0.1458	0.1081	0.1263	0.2137	0.23	0.15	0.14	0.13	0.1746	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.594938	NA	NA	0.182961	0.124489	NA	0.152	NA	5.0914056
1143	9	6734997	6734997	T	A	intronic	KDM4C	NA	NA	NA	ncRNA_exonic	ENSG00000231108	NA	NA	NA	Score=652;Name=lod=598	NA	9p24.1	NA	NA	NA	NA	rs2988411	0.15	0.15	0.133	0.127796	0.2425	NA	0.1571	0.1846	0.044	0.23	NA	0.17	0.17	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.973947	NA	NA	NA	NA	NA	0.145	NA	5.0908333
1143	9	96082752	96082752	G	T	UTR3	WNK2	NM_006648:c.*78G>T	NA	NA	UTR3	ENSG00000165238	ENST00000356055:c.*722G>T,ENST00000349097:c.*78G>T,ENST00000395475:c.*4197G>T,ENST00000395477:c.*78G>T,ENST00000448251:c.*78G>T	NA	NA	Score=603;Name=lod=375	NA	9q22.31	NA	NA	NA	NA	rs6479474	0.11	0.11	0.118	0.0972444	0.1362	0.001	0.0893	0.1762	0.0552	0.14	0.0017	0.1	0.18	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.448841	4.448841	NA	0.106537	0.15896	NA	0.101	NA	5.0905964
1143	6	44081718	44081718	G	A	exonic	MRPL14	NA	synonymous SNV	MRPL14:NM_032111:exon3:c.C300T:p.F100F	exonic	ENSG00000180992	NA	synonymous SNV	ENSG00000180992:ENST00000372014:exon3:c.C300T:p.F100F	NA	NA	6p21.1	Score=700;Name=V$BRACH_01	NA	NA	NA	rs6883	0.67	0.67	0.66	0.670128	0.495	0.7857	0.719	0.8079	0.5102	0.49	0.78	0.68	0.82	0.5809	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.616142	NA	NA	0.500465	0.7601	NA	0.594	NA	5.0903016
1143	10	44100867	44100867	T	G	upstream	ZNF485	NA	NA	NA	ncRNA_exonic	ENSG00000232004	NA	NA	NA	Score=508;Name=lod=155	NA	10q11.21	NA	NA	NA	NA	rs7916345	0.07	0.07	0.08	0.076877	0.0765	0.001	0.0418	0.1747	0.0481	0.08	0.0017	0.04	0.17	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.93661	1.93661	NA	NA	NA	NA	0.109	NA	5.0901666
1143	14	78197365	78197365	C	T	exonic	SNW1	NA	synonymous SNV	SNW1:NM_012245:exon10:c.G999A:p.E333E	exonic	ENSG00000100603	NA	synonymous SNV	ENSG00000100603:ENST00000554775:exon7:c.G513A:p.E171E,ENSG00000100603:ENST00000261531:exon10:c.G999A:p.E333E,ENSG00000100603:ENST00000555761:exon10:c.G999A:p.E333E	Score=692;Name=lod=863	NA	14q24.3	NA	NA	NA	NA	rs114763	0.59	0.59	0.573	0.622404	0.4861	0.6796	0.6513	0.6059	0.7055	0.49	0.65	0.65	0.61	0.5712	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.784944	NA	NA	0.519419	0.558557	NA	0.449	NA	5.0899476
1143	14	24760808	24760808	C	T	exonic	DHRS1	NA	synonymous SNV	DHRS1:NM_001136050:exon7:c.G678A:p.A226A,DHRS1:NM_138452:exon7:c.G678A:p.A226A	exonic	ENSG00000157379	NA	synonymous SNV	ENSG00000157379:ENST00000288111:exon7:c.G678A:p.A226A,ENSG00000157379:ENST00000396813:exon7:c.G678A:p.A226A	NA	NA	14q12	NA	NA	NA	NA	rs1131941	0.15	0.15	0.135	0.148962	0.1869	0.004	0.3473	0.1513	0.1155	0.2	0.01	0.3	0.14	0.1826	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.813684	NA	NA	0.207326	0.165229	NA	0.13	NA	5.0898406
1143	1	228496014	228496014	G	A	exonic	OBSCN	NA	synonymous SNV	OBSCN:NM_001098623:exon47:c.G12669A:p.T4223T,OBSCN:NM_052843:exon47:c.G12669A:p.T4223T,OBSCN:NM_001271223:exon58:c.G15540A:p.T5180T	exonic	ENSG00000154358	NA	synonymous SNV	ENSG00000154358:ENST00000284548:exon47:c.G12669A:p.T4223T,ENSG00000154358:ENST00000366709:exon47:c.G4026A:p.T1342T,ENSG00000154358:ENST00000422127:exon47:c.G12669A:p.T4223T,ENSG00000154358:ENST00000366707:exon53:c.G5571A:p.T1857T,ENSG00000154358:ENST00000570156:exon58:c.G15540A:p.T5180T	NA	NA	1q42.13	NA	NA	NA	NA	rs876180	0.22	0.22	0.19	0.213059	0.161	0.1825	0.2781	0.32	0.1074	0.16	0.17	0.28	0.33	0.2387	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.16416	NA	NA	0.177194	0.318974	ID=COSM425523,COSM1473532,COSM1473531;OCCURENCE=1(breast)	0.225	NA	5.0897726
1143	3	21447799	21447799	T	C	ncRNA_exonic	VENTXP7	NA	NA	NA	ncRNA_exonic	ENSG00000236380	NA	NA	NA	Score=313;Name=lod=25	NA	3p24.3	NA	NA	NA	NA	rs430387	0.76	0.76	0.738	0.769968	0.5775	0.8661	0.7161	0.8933	0.7403	0.61	0.86	0.74	0.89	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.027169	NA	NA	NA	NA	NA	0.71	NA	5.0891666
1143	12	64875787	64875787	T	A	exonic	TBK1	NA	synonymous SNV	TBK1:NM_013254:exon8:c.T978A:p.I326I	exonic	ENSG00000183735	NA	synonymous SNV	ENSG00000183735:ENST00000331710:exon8:c.T978A:p.I326I	Score=573;Name=lod=283	NA	12q14.2	NA	NA	NA	NA	rs7486100	0.41	0.41	0.359	0.353235	0.5388	0.3046	0.4798	0.1649	0.3773	0.54	0.34	0.51	0.21	0.4814	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.413445	NA	NA	0.557442	0.209941	NA	0.507	NA	5.0890246
1143	12	133702259	133702259	C	T	intronic	ZNF891	NA	NA	NA	ncRNA_exonic	ENSG00000240991	NA	NA	NA	Score=700;Name=lod=936	NA	12q24.33	NA	NA	NA	NA	rs11147243	0.15	0.15	0.131	0.149161	0.2455	0.122	0.1614	0.0091	0.2587	0.25	0.12	0.17	0.01	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.280123	NA	NA	NA	NA	NA	0.051	NA	5.0878333
1143	14	81499155	81499155	G	A	intronic	TSHR	NA	NA	NA	ncRNA_exonic	ENSG00000259167	NA	NA	NA	Score=631;Name=lod=487	NA	14q31.1	NA	NA	NA	NA	rs2192727	0.23	0.23	0.254	0.245807	0.2455	0.1984	0.147	0.2368	0.3773	0.25	0.21	0.17	0.25	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.326393	NA	NA	NA	NA	NA	0.268	NA	5.0878333
1143	14	81499495	81499495	C	G	intronic	TSHR	NA	NA	NA	ncRNA_exonic	ENSG00000259167	NA	NA	NA	Score=654;Name=lod=608	NA	14q31.1	NA	NA	NA	NA	rs2268470	0.23	0.23	0.239	0.245607	0.2455	0.1984	0.147	0.2368	0.3763	0.25	0.21	0.17	0.25	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.006157	NA	NA	NA	NA	NA	0.268	NA	5.0878333
1143	14	81499539	81499539	T	C	intronic	TSHR	NA	NA	NA	ncRNA_exonic	ENSG00000259167	NA	NA	NA	Score=654;Name=lod=608	NA	14q31.1	NA	NA	NA	NA	rs2268471	0.23	0.23	0.233	0.245807	0.2455	0.1984	0.147	0.2368	0.3773	0.25	0.21	0.17	0.25	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.202909	NA	NA	NA	NA	NA	0.268	NA	5.0878333
1143	19	58084930	58084930	G	A	exonic	ZNF416	NA	synonymous SNV	ZNF416:NM_017879:exon4:c.C342T:p.T114T	exonic	ENSG00000083817	NA	synonymous SNV	ENSG00000083817:ENST00000196489:exon4:c.C342T:p.T114T	NA	NA	19q13.43	NA	NA	NA	NA	rs3746222	0.15	0.15	0.174	0.167532	0.2078	0.0942	0.1369	0.202	0.1769	0.21	0.06	0.14	0.18	0.1786	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.172978	NA	NA	0.19314	0.193373	NA	0.188	NA	5.0871266
1143	4	88584148	88584148	C	T	exonic	DMP1	NA	synonymous SNV	DMP1:NM_001079911:exon5:c.C1170T:p.S390S,DMP1:NM_004407:exon6:c.C1218T:p.S406S	exonic	ENSG00000152592	NA	synonymous SNV	ENSG00000152592:ENST00000282479:exon5:c.C1170T:p.S390S,ENSG00000152592:ENST00000339673:exon6:c.C1218T:p.S406S	NA	NA	4q22.1	NA	NA	NA	NA	rs2615498	0.16	0.16	0.157	0.175719	0.1968	0.2401	0.1527	0.0431	0.2832	0.2	0.24	0.14	0.05	0.1915	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.275765	NA	NA	0.191395	0.073082	NA	0.152	NA	5.0869716
1143	1	183184616	183184616	C	T	exonic	LAMC2	NA	synonymous SNV	LAMC2:NM_005562:exon3:c.C297T:p.S99S,LAMC2:NM_018891:exon3:c.C297T:p.S99S	exonic	ENSG00000058085	NA	synonymous SNV	ENSG00000058085:ENST00000264144:exon3:c.C297T:p.S99S,ENSG00000058085:ENST00000493293:exon3:c.C297T:p.S99S	NA	NA	1q25.3	NA	NA	NA	NA	rs2274980	0.29	0.29	0.283	0.313698	0.1571	0.3333	0.317	0.4024	0.3323	0.17	0.34	0.29	0.41	0.246	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.018329	NA	NA	0.176628	0.381752	NA	0.232	NA	5.0869386
1143	22	44342325	44342325	C	T	UTR3	PNPLA3	NM_025225:c.*63C>T	NA	NA	UTR3	ENSG00000100344	ENST00000216180:c.*63C>T,ENST00000423180:c.*63C>T	NA	NA	NA	NA	22q13.31	NA	Name=CTCF,Rad21	NA	NA	rs2294919	0.26	0.26	0.238	0.246605	0.2465	0.3819	0.1916	0.1475	0.2802	0.25	0.36	0.21	0.19	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.203321	NA	NA	NA	NA	NA	0.312	NA	5.0868334
1143	3	72821708	72821708	T	C	intronic	SHQ1	NA	NA	NA	ncRNA_exonic	ENSG00000241537	NA	NA	NA	Score=615;Name=lod=423	NA	3p13	NA	NA	NA	NA	rs62251655	0.18	0.18	0.18	0.16873	0.2465	0.0427	0.1643	0.2126	0.1626	0.26	0.04	0.16	0.23	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.686254	NA	NA	NA	NA	NA	0.101	NA	5.0868333
1143	9	130062379	130062379	A	G	intronic	GARNL3	NA	NA	NA	ncRNA_exonic	ENSG00000229369	NA	NA	NA	Score=651;Name=lod=590	NA	9q33.3	NA	NA	NA	NA	rs62578825	0.17	0.17	0.154	0.171126	0.2465	0.246	0.1499	0.031	0.2209	0.23	0.21	0.15	0.03	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.151137	NA	NA	NA	NA	NA	0.152	NA	5.0868333
1143	6	66112409	66112409	A	G	exonic	EYS	NA	synonymous SNV	EYS:NM_198283:exon6:c.T1146C:p.N382N,EYS:NM_001142800:exon7:c.T1146C:p.N382N,EYS:NM_001142801:exon7:c.T1146C:p.N382N	exonic	ENSG00000188107	NA	synonymous SNV	ENSG00000188107:ENST00000370616:exon4:c.T1146C:p.N382N,ENSG00000188107:ENST00000342421:exon5:c.T1146C:p.N382N,ENSG00000188107:ENST00000370618:exon7:c.T1146C:p.N382N,ENSG00000188107:ENST00000370621:exon7:c.T1146C:p.N382N,ENSG00000188107:ENST00000393380:exon7:c.T1146C:p.N382N,ENSG00000188107:ENST00000503581:exon7:c.T1146C:p.N382N	NA	NA	6q12	NA	Name=c-Fos	NA	NA	rs974110	0.5	0.5	0.507	0.50599	0.5388	0.4554	0.5072	0.5129	0.5143	0.55	0.45	0.44	0.53	0.5165	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.621961	NA	NA	0.525082	0.534287	NA	0.514	NA	5.0862846
1143	5	41475766	41475766	C	T	intronic	PLCXD3	NA	NA	NA	intronic	ENSG00000182836	NA	NA	NA	Score=497;Name=lod=140	NA	5p13.1	NA	NA	Name=2	NA	rs318039	0.28	0.28	0.328	0.365216	0.3082	0.1081	0.2349	0.6861	0.3476	0.28	0.1	0.2	0.55	0.308	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.327141	NA	NA	0.297599	0.598533	ID=COSN404847;OCCURENCE=1(lung)	0.355	NA	5.086201
1143	11	130785304	130785304	T	C	exonic	SNX19	NA	synonymous SNV	SNX19:NM_014758:exon1:c.A531G:p.A177A	exonic	ENSG00000120451	NA	synonymous SNV	ENSG00000120451:ENST00000265909:exon1:c.A531G:p.A177A,ENSG00000120451:ENST00000533214:exon1:c.A531G:p.A177A	NA	NA	11q24.3	NA	NA	NA	NA	rs3751034	0.14	0.14	0.138	0.127396	0.1988	0.1538	0.0893	0.0492	0.1595	0.21	0.17	0.1	0.05	0.175	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.231393	NA	NA	0.207005	0.071558	NA	0.225	NA	5.0858616
1143	6	74328252	74328252	C	T	intronic	SLC17A5	NA	NA	NA	ncRNA_exonic	ENSG00000218459	NA	NA	NA	Score=672;Name=lod=719	NA	6q13	NA	NA	NA	NA	rs62438456	0.16	0.16	0.149	0.153355	0.2475	0.0208	0.1297	0.202	0.1442	0.25	0.02	0.13	0.21	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.382165	NA	NA	NA	NA	NA	0.159	NA	5.0858333
1143	11	130784707	130784707	C	T	exonic	SNX19	NA	synonymous SNV	SNX19:NM_014758:exon1:c.G1128A:p.P376P	exonic	ENSG00000120451	NA	synonymous SNV	ENSG00000120451:ENST00000265909:exon1:c.G1128A:p.P376P,ENSG00000120451:ENST00000533214:exon1:c.G1128A:p.P376P	NA	NA	11q24.3	NA	NA	NA	NA	rs61736752	0.14	0.14	0.135	0.127596	0.1988	0.1538	0.0893	0.0492	0.1605	0.2	0.17	0.1	0.05	0.1743	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.128738	NA	NA	0.207936	0.071558	NA	0.217	NA	5.0856306
1143	16	2140454	2140454	T	C	exonic	PKD1	NA	synonymous SNV	PKD1:NM_000296:exon45:c.A12273G:p.A4091A,PKD1:NM_001009944:exon45:c.A12276G:p.A4092A	exonic	ENSG00000008710	NA	synonymous SNV	ENSG00000008710:ENST00000262304:exon45:c.A12276G:p.A4092A,ENSG00000008710:ENST00000423118:exon45:c.A12273G:p.A4091A	NA	NA	16p13.3	NA	NA	NA	NA	rs3087632	0.26	0.26	0.262	0.276358	0.1988	NA	0.2104	0.7186	0.09	0.2	NA	0.23	0.69	0.196	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.581834	NA	NA	0.186393	0.600779	NA	0.297	NA	5.0854736
1143	11	130785205	130785205	G	A	exonic	SNX19	NA	synonymous SNV	SNX19:NM_014758:exon1:c.C630T:p.T210T	exonic	ENSG00000120451	NA	synonymous SNV	ENSG00000120451:ENST00000265909:exon1:c.C630T:p.T210T,ENSG00000120451:ENST00000533214:exon1:c.C630T:p.T210T	NA	NA	11q24.3	NA	NA	NA	NA	rs3751035	0.14	0.14	0.141	0.127396	0.1988	0.1538	0.0893	0.0492	0.1595	0.2	0.17	0.1	0.05	0.1751	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.688005	NA	NA	0.207354	0.072013	NA	0.21	NA	5.0854126
1144	10	129322788	129322788	C	T	intergenic	DOCK1,NPS	dist=72008;dist=24825	NA	NA	intergenic	ENSG00000150760,ENSG00000214285	dist=72007;dist=24825	NA	NA	NA	NA	10q26.2	NA	Name=CTCF_(SC-5916),Rad21,CTCF	Name=9	NA	rs4751437	0.25	0.25	0.274	0.288738	0.2485	0.1111	0.1888	0.4826	0.3221	0.25	0.09	0.2	0.48	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.493752	NA	NA	NA	NA	NA	0.384	NA	5.0848334
1144	2	220439678	220439678	C	T	exonic	INHA	NA	synonymous SNV	INHA:NM_002191:exon2:c.C531T:p.A177A	exonic	ENSG00000123999	NA	synonymous SNV	ENSG00000123999:ENST00000243786:exon2:c.C531T:p.A177A	NA	NA	2q35	NA	NA	NA	NA	rs12720063	0.19	0.19	0.147	0.153355	0.1968	0.2103	0.2464	0.0809	0.0818	0.2	0.22	0.24	0.1	0.1812	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.672553	NA	NA	0.204302	0.114389	NA	0.145	NA	5.0843646
1144	6	31083813	31083813	T	C	exonic	CDSN	NA	nonsynonymous SNV	CDSN:NM_001264:exon2:c.A1579G:p.N527D	exonic	ENSG00000204539	NA	nonsynonymous SNV	ENSG00000204539:ENST00000376288:exon2:c.A1579G:p.N527D	NA	NA	6p21.33	NA	NA	NA	NA	rs3130981	0.8	0.8	0.813	0.833666	0.7356	0.872	0.7666	0.913	0.8354	0.72	0.86	0.73	0.91	0.7639	0.91	1	T	.	.	.	.	0.284	N	1.000	P	.	.	3.58	T	-0.954	T	0.001	T	0.015	-1.276	0.043	-1.19	-0.415	-0.104	4.482	-1.27559	NA	1	0.749514	0.899497	NA	0.833	NA	5.0843194
1144	18	56196451	56196451	C	T	exonic	ALPK2	NA	synonymous SNV	ALPK2:NM_052947:exon6:c.G5373A:p.K1791K	exonic	ENSG00000198796	NA	synonymous SNV	ENSG00000198796:ENST00000361673:exon6:c.G5373A:p.K1791K	Score=513;Name=lod=162	NA	18q21.31	NA	NA	NA	NA	rs7236563	0.42	0.42	0.378	0.373003	0.5815	0.2381	0.415	0.3169	0.3436	0.59	0.24	0.5	0.3	0.4641	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.613339	NA	NA	0.53686	0.357694	ID=COSM1389288;OCCURENCE=1(large_intestine)	0.471	NA	5.0842066
1144	17	7460517	7460517	G	C	exonic	TNFSF12	NA	synonymous SNV	TNFSF12:NM_003809:exon7:c.G600C:p.A200A	exonic	ENSG00000239697	NA	synonymous SNV	ENSG00000239697:ENST00000293825:exon7:c.G600C:p.A200A	NA	NA	17p13.1	NA	NA	Name=5	NA	rs3803798	0.52	0.52	0.511	0.547524	0.5139	0.6458	0.6167	0.4266	0.5951	0.52	0.6	0.55	0.39	0.5437	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.726644	NA	NA	0.524884	0.452565	ID=COSM292476;OCCURENCE=1(large_intestine)	0.529	NA	5.0841826
1144	12	101462556	101462556	C	T	intronic	ANO4	NA	NA	NA	ncRNA_exonic	ENSG00000258033	NA	NA	NA	Score=516;Name=lod=166	NA	12q23.1	NA	NA	NA	NA	rs626423	0.27	0.27	0.239	0.285543	0.2495	0.5675	0.2334	0.025	0.4213	0.23	0.55	0.24	0.04	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.526596	NA	NA	NA	NA	ID=COSN164341;OCCURENCE=1(breast)	0.13	NA	5.0838333
1144	19	51631165	51631165	C	A	intronic	SIGLEC9	NA	NA	NA	intronic	ENSG00000129450	NA	NA	NA	NA	NA	19q13.41	NA	Name=PU.1,eGFP-JunD,FOSL1_(SC-183),Egr-1,c-Jun,c-Fos,eGFP-JunB,ZBTB7A_(SC-34508),eGFP-FOS	Name=48	NA	rs867188	0.17	0.17	0.141	0.16254	0.33	0.0079	0.2406	0.0439	0.2546	0.33	0.01	0.26	0.05	0.267	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.414325	NA	NA	0.319651	0.095552	NA	0.225	NA	5.083349
1144	11	17566037	17566037	A	C	upstream	USH1C	NA	NA	NA	upstream	ENSG00000006611	NA	NA	NA	NA	NA	11p15.1	NA	Name=Pol2-4H8	Name=13	NA	rs1859819	0.59	0.59	0.532	0.605831	0.5835	0.5913	0.5576	0.6785	0.5798	0.55	0.59	0.54	0.69	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.061405	NA	NA	NA	NA	NA	0.29	NA	5.0831666
1144	15	75980112	75980112	A	G	exonic	CSPG4	NA	synonymous SNV	CSPG4:NM_001897:exon3:c.T3294C:p.A1098A	exonic	ENSG00000173546	NA	synonymous SNV	ENSG00000173546:ENST00000308508:exon3:c.T3294C:p.A1098A	NA	NA	15q24.2	Score=844;Name=V$AP4_01	NA	NA	NA	rs4414463	0.44	0.44	0.396	0.441294	0.5229	0.3145	0.5548	0.4024	0.4601	0.52	0.29	0.54	0.41	0.5096	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.493558	NA	NA	0.551608	0.425125	NA	0.529	NA	5.0825586
1144	15	25318447	25318447	G	A	upstream;downstream	SNORD116-10;SNORD116-3,SNORD116-9	NA	NA	NA	ncRNA_intronic	ENSG00000224078	NA	NA	NA	NA	NA	15q11.2	NA	Name=ZNF274	NA	NA	rs11638645	0.14	0.14	0.166	0.171526	0.0845	0.002	0.0821	0.5045	0.0491	0.08	0.0017	0.06	0.45	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.833006	NA	NA	NA	NA	NA	0.138	NA	5.0821666
1144	4	43589844	43589844	T	C	intergenic	GRXCR1,KCTD8	dist=557169;dist=586076	NA	NA	ncRNA_exonic	ENSG00000251501	NA	NA	NA	Score=295;Name=lod=21	NA	4p13	NA	NA	Name=12	NA	rs4438794	0.64	0.64	0.603	0.615415	0.9185	0.621	0.6225	0.3245	0.6861	0.92	0.56	0.64	0.3	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.404993	1.404993	NA	NA	NA	NA	0.732	NA	5.0815
1144	6	46129345	46129345	G	A	exonic	ENPP5	NA	synonymous SNV	ENPP5:NM_021572:exon4:c.C1152T:p.T384T	exonic	ENSG00000112796	NA	synonymous SNV	ENSG00000112796:ENST00000230565:exon4:c.C1152T:p.T384T,ENSG00000112796:ENST00000371383:exon5:c.C1152T:p.T384T	NA	NA	6p21.1	Score=704;Name=V$HOX13_01	NA	NA	NA	rs2235881	0.42	0.42	0.432	0.446486	0.5348	0.4494	0.4467	0.1899	0.6994	0.54	0.4	0.49	0.19	0.5167	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.483318	NA	NA	0.533953	0.238084	NA	0.406	NA	5.0812136
1144	10	97759626	97759626	A	G	ncRNA_intronic	ENTPD1-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000227805	NA	NA	NA	Score=733;Name=lod=1275	NA	10q24.1	NA	NA	NA	NA	rs2015029	0.65	0.65	0.619	0.624201	0.5855	0.8125	0.572	0.6036	0.5348	0.59	0.79	0.56	0.63	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.28235	NA	NA	NA	NA	NA	0.551	NA	5.0811666
1144	3	190040008	190040008	C	G	UTR5	CLDN1	NM_021101:c.-13G>C	NA	NA	UTR5	ENSG00000163347	ENST00000295522:c.-13G>C	NA	NA	NA	NA	3q28	NA	Name=Pol2	NA	NA	rs17429833	0.06	0.06	0.044	0.0509185	0.0994	0.0129	0.0778	0.0287	0.0511	0.1	0.01	0.08	0.03	0.0682	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.37764	2.37764	NA	0.084903	0.030867	NA	0.036	NA	5.0808304
1144	7	56754398	56754398	A	G	intergenic	DKFZp434L192,LOC100130849	dist=189421;dist=188680	NA	NA	intergenic	ENSG00000228303,ENSG00000233437	dist=36009;dist=188680	NA	NA	Score=349;Name=lod=35	NA	7p11.2	NA	Name=ZNF274	NA	NA	rs10274733	0.23	0.23	0.186	0.207668	0.2535	0.2004	0.2046	0.2163	0.1585	0.24	0.22	0.22	0.22	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.368081	NA	NA	NA	NA	NA	0.188	NA	5.0798334
1144	10	116006436	116006436	T	C	intronic	VWA2	NA	NA	NA	ncRNA_exonic	ENSG00000230165	NA	NA	NA	Score=537;Name=lod=203	NA	10q25.3	NA	NA	NA	NA	rs3851559	0.22	0.22	0.195	0.211262	0.2535	0.0605	0.2378	0.3533	0.1125	0.24	0.06	0.26	0.32	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.057013	NA	NA	NA	NA	NA	0.167	NA	5.0798333
1144	16	87870312	87870312	C	T	intronic	SLC7A5	NA	NA	NA	ncRNA_exonic	ENSG00000260466	NA	NA	NA	NA	NA	16q24.2	NA	Name=Pol2	NA	NA	rs12444670	0.2	0.2	0.22	0.239617	0.2535	0.0456	0.2262	0.2784	0.3824	0.25	0.04	0.26	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.04672	NA	NA	NA	NA	NA	0.217	NA	5.0798333
1144	7	130021488	130021488	G	C	exonic	CPA1	NA	synonymous SNV	CPA1:NM_001868:exon3:c.G165C:p.G55G	exonic	ENSG00000091704	NA	synonymous SNV	ENSG00000091704:ENST00000011292:exon3:c.G165C:p.G55G	NA	NA	7q32.2	Score=723;Name=V$P53_01	NA	NA	NA	rs1126899	0.57	0.57	0.537	0.582268	0.5467	0.621	0.5504	0.6611	0.4949	0.54	0.58	0.56	0.61	0.5368	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.390941	NA	NA	0.503954	0.641852	NA	0.5	NA	5.0792126
1144	17	46607817	46607817	C	T	exonic	HOXB1	NA	synonymous SNV	HOXB1:NM_002144:exon1:c.G450A:p.A150A	exonic	ENSG00000120094	NA	synonymous SNV	ENSG00000120094:ENST00000239174:exon1:c.G450A:p.A150A,ENSG00000120094:ENST00000577092:exon1:c.G450A:p.A150A	NA	NA	17q21.32	NA	NA	NA	NA	rs7207109	0.13	0.13	0.121	0.131789	0.2048	0.0972	0.1225	0.1082	0.1309	0.21	0.06	0.12	0.1	0.1754	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.397485	NA	NA	0.207674	0.124149	NA	0.174	NA	5.0787926
1144	2	100210074	100210074	G	C	exonic	AFF3	NA	synonymous SNV	AFF3:NM_001025108:exon14:c.C2124G:p.S708S,AFF3:NM_002285:exon14:c.C2049G:p.S683S	exonic	ENSG00000144218	NA	synonymous SNV	ENSG00000144218:ENST00000409236:exon13:c.C2049G:p.S683S,ENSG00000144218:ENST00000317233:exon14:c.C2049G:p.S683S,ENSG00000144218:ENST00000356421:exon14:c.C2124G:p.S708S,ENSG00000144218:ENST00000409579:exon15:c.C2124G:p.S708S	NA	NA	2q11.2	NA	NA	NA	NA	rs1047281	0.14	0.14	0.174	0.146765	0.2038	0.0843	0.1239	0.087	0.2495	0.21	0.1	0.14	0.08	0.1851	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.45531	NA	NA	0.199394	0.115105	ID=COSM440885;OCCURENCE=1(breast)	0.225	NA	5.0783726
1144	15	56615958	56615958	G	A	intergenic	RFX7,TEX9	dist=80475;dist=41686	NA	NA	intronic	ENSG00000151575	NA	NA	NA	Score=686;Name=lod=821	NA	15q21.3	NA	NA	Name=2	NA	rs62047371	0.4	0.4	0.327	0.403754	0.5895	0.4008	0.5346	0.2163	0.3763	0.51	0.34	0.49	0.22	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.292806	NA	NA	NA	NA	NA	0.043	NA	5.0771667
1144	19	690761	690761	A	T	intronic	PRSS57	NA	NA	NA	ncRNA_exonic	ENSG00000213726	NA	NA	NA	Score=812;Name=lod=2648	NA	19p13.3	NA	NA	NA	NA	rs10422514	0.33	0.33	0.018	0.363219	0.2565	0.3968	0.1945	0.5862	0.2566	0.24	0.37	0.18	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.040681	NA	NA	NA	NA	NA	NA	NA	5.0768333
1144	19	690762	690762	T	G	intronic	PRSS57	NA	NA	NA	ncRNA_exonic	ENSG00000213726	NA	NA	NA	Score=812;Name=lod=2648	NA	19p13.3	NA	NA	NA	NA	rs10402839	0.33	0.33	0.053	0.363219	0.2565	0.3968	0.1945	0.5862	0.2566	0.24	0.37	0.18	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.241565	NA	NA	NA	NA	NA	NA	NA	5.0768333
1144	1	26872554	26872554	A	G	intronic	RPS6KA1	NA	NA	NA	intronic	ENSG00000117676	NA	NA	NA	NA	NA	1p36.11	NA	Name=Pol2	Name=4	NA	rs12723936	0.46	0.46	0.444	0.505591	0.2833	0.7659	0.366	0.4917	0.5838	0.29	0.75	0.35	0.48	0.3825	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.403372	1.403372	NA	0.257385	0.445983	NA	0.384	NA	5.076815
1144	20	47244523	47244523	A	G	intronic	PREX1	NA	NA	NA	intronic	ENSG00000124126	NA	NA	NA	NA	NA	20q13.13	NA	Name=c-Myc	Name=6	NA	rs8121156	0.28	0.28	0.217	0.294129	0.2952	0.1458	0.3069	0.3676	0.3374	0.28	0.14	0.34	0.37	0.3324	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.320025	NA	NA	0.29618	0.347885	NA	0.159	NA	5.07622
1144	12	109095137	109095137	A	G	intronic	CORO1C	NA	NA	NA	intronic	ENSG00000110880	NA	NA	NA	NA	NA	12q24.11	NA	Name=Pol2,KAP1	Name=42	NA	rs3741782	0.23	0.23	0.213	0.2498	0.2982	0.3839	0.2075	0.0106	0.4151	0.31	0.34	0.21	0.01	0.3102	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.775309	NA	NA	0.315814	0.064911	NA	0.203	NA	5.075786
1144	6	24583804	24583804	T	A	intronic	KIAA0319	NA	NA	NA	intronic	ENSG00000137261	NA	NA	NA	NA	NA	6p22.3	NA	Name=YY1_(C-20),SMC3_(ab9263),CTCF_(SC-5916),RFX5_(N-494),CTCFL_(SC-98982),Znf143_(16618-1-AP),CTCF,CTCF_(C-20),Rad21	Name=133	NA	rs6901322	0.51	0.51	0.508	0.52496	0.2644	0.747	0.5418	0.621	0.4223	0.27	0.73	0.54	0.62	0.3791	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.395244	NA	NA	0.281163	0.55901	NA	0.594	NA	5.075337
1144	1	26662904	26662904	C	T	intronic	AIM1L	NA	NA	NA	intronic	ENSG00000176092	NA	NA	NA	NA	NA	1p36.11	NA	Name=ZNF263,Pol2-4H8,Pol2	Name=55	NA	rs72649360	0.26	0.26	0.233	0.210264	0.3022	0.2639	0.2507	0.1331	0.136	0.32	0.26	0.27	0.17	0.3128	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.199669	NA	NA	0.309884	0.167575	NA	0.254	NA	5.075116
1145	3	157004141	157004141	G	A	intronic	VEPH1	NA	NA	NA	ncRNA_intronic	ENSG00000243176	NA	NA	NA	NA	NA	3q25.32	NA	Name=c-Fos	NA	NA	rs4680352	0.26	0.26	0.218	0.227835	0.2584	0.3343	0.4712	0.0333	0.1769	0.25	0.36	0.42	0.05	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.44844	NA	NA	NA	NA	NA	0.152	NA	5.0749333
1145	4	57461019	57461019	C	T	intronic	THEGL	NA	NA	NA	ncRNA_exonic	ENSG00000248590	NA	NA	NA	Score=772;Name=lod=1834	NA	4q12	NA	NA	NA	NA	rs11946383	0.36	0.36	0.35	0.417532	0.2584	0.4544	0.3516	0.5424	0.4213	0.25	0.41	0.35	0.49	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.224875	NA	NA	NA	NA	NA	0.391	NA	5.0749333
1145	20	32340077	32340077	A	G	intronic	ZNF341	NA	NA	NA	ncRNA_exonic	ENSG00000230837	NA	NA	NA	Score=717;Name=lod=1091	NA	20q11.22	NA	NA	NA	NA	rs2626537	0.47	0.47	0.467	0.484824	0.2584	0.7133	0.2565	0.6475	0.4243	0.26	0.71	0.28	0.64	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.090614	NA	NA	NA	NA	NA	0.522	NA	5.0749333
1145	3	142168331	142168331	C	T	exonic	ATR	NA	synonymous SNV	ATR:NM_001184:exon47:c.G7875A:p.Q2625Q	exonic	ENSG00000175054	NA	synonymous SNV	ENSG00000175054:ENST00000383101:exon46:c.G7683A:p.Q2561Q,ENSG00000175054:ENST00000350721:exon47:c.G7875A:p.Q2625Q	Score=594;Name=lod=346	NA	3q23	NA	NA	NA	NA	rs1802904	0.9	0.9	0.92	0.916334	0.8658	0.9266	0.8084	0.9856	0.9407	0.86	0.93	0.83	0.99	0.8646	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.900501	NA	NA	0.861395	0.968906	NA	0.877	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000079601.1;CLNDSDB=.;CLNDSDBID=.	5.0748716
1145	6	155635624	155635624	A	G	upstream	TFB1M	NA	NA	NA	upstream	ENSG00000029639	NA	NA	NA	NA	NA	6q25.3	NA	Name=YY1,Pol2,RFX5_(N-494),PU.1,SP1,ZNF263,c-Fos,Pol2-4H8,YY1_(C-20),HA-E2F1,Sin3Ak-20,NF-YA,SP2_(SC-643),Pol2(b),TAF1,GABP,POU2F2,Nrf1,CHD2_(N-1250),TBP,ELF1_(SC-631),HEY1,NFKB,c-Myc,Oct-2,NF-YB,PAX5-C20	Name=148	NA	rs1334688	0.61	0.61	0.56	0.615016	0.5924	0.8145	0.7161	0.3631	0.7014	0.59	0.82	0.69	0.36	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.357531	NA	NA	NA	NA	NA	0.522	NA	5.0742666
1145	6	155635637	155635637	A	C	upstream	TFB1M	NA	NA	NA	upstream	ENSG00000029639	NA	NA	NA	NA	NA	6q25.3	NA	Name=SP2_(SC-643),NF-YA,Pol2(b),TAF1,GABP,POU2F2,YY1,SP1,PU.1,RFX5_(N-494),Pol2,c-Fos,Pol2-4H8,ZNF263,Sin3Ak-20,HA-E2F1,YY1_(C-20),NFKB,HEY1,ELF1_(SC-631),c-Myc,CCNT2,Oct-2,PAX5-C20,NF-YB,Nrf1,CHD2_(N-1250),TBP	Name=148	NA	rs1334687	0.61	0.61	0.563	0.615016	0.5924	0.8145	0.7161	0.3631	0.7014	0.59	0.82	0.69	0.36	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.7918	NA	NA	NA	NA	NA	0.529	NA	5.0742666
1145	1	78557486	78557486	A	G	intronic	GIPC2	NA	NA	NA	ncRNA_exonic	ENSG00000213560	NA	NA	NA	Score=709;Name=lod=1019	NA	1p31.1	NA	NA	NA	NA	rs485005	0.28	0.28	0.272	0.238419	0.2594	0.505	0.1585	0.1604	0.1043	0.24	0.49	0.16	0.19	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.144384	NA	NA	NA	NA	NA	0.29	NA	5.0739333
1145	1	78557514	78557514	G	A	intronic	GIPC2	NA	NA	NA	ncRNA_exonic	ENSG00000213560	NA	NA	NA	Score=709;Name=lod=1019	NA	1p31.1	NA	NA	NA	NA	rs631045	0.28	0.28	0.269	0.238419	0.2594	0.504	0.1585	0.1604	0.1053	0.24	0.49	0.16	0.19	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.291692	1.291692	NA	NA	NA	NA	0.29	NA	5.0739333
1145	1	78557608	78557608	A	G	intronic	GIPC2	NA	NA	NA	ncRNA_exonic	ENSG00000213560	NA	NA	NA	Score=709;Name=lod=1019	NA	1p31.1	NA	NA	NA	NA	rs630640	0.28	0.28	0.295	0.238219	0.2594	0.504	0.1585	0.1604	0.1043	0.24	0.49	0.16	0.19	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.601377	NA	NA	NA	NA	NA	0.29	NA	5.0739333
1145	1	78557664	78557664	A	C	intronic	GIPC2	NA	NA	NA	ncRNA_exonic	ENSG00000213560	NA	NA	NA	Score=709;Name=lod=1019	NA	1p31.1	NA	NA	NA	NA	rs630245	0.28	0.28	0.275	0.238219	0.2594	0.504	0.1585	0.1604	0.1043	0.24	0.49	0.16	0.19	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.012174	NA	NA	NA	NA	NA	0.29	NA	5.0739333
1145	1	110201699	110201699	T	C	exonic	GSTM4	NA	synonymous SNV	GSTM4:NM_000850:exon7:c.T534C:p.F178F,GSTM4:NM_147148:exon7:c.T534C:p.F178F	exonic	ENSG00000168765	NA	synonymous SNV	ENSG00000168765:ENST00000336075:exon5:c.T351C:p.F117F,ENSG00000168765:ENST00000369833:exon5:c.T411C:p.F137F,ENSG00000168765:ENST00000326729:exon7:c.T534C:p.F178F,ENSG00000168765:ENST00000369836:exon7:c.T534C:p.F178F	Score=397;Name=lod=55	NA	1p13.3	Score=935;Name=V$CEBP_01	NA	NA	NA	rs506008	0.74	0.74	0.795	0.805312	0.8598	0.9702	0.8732	0.5681	0.8517	0.8	0.9	0.79	0.43	0.8598	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.499926	NA	NA	0.873516	0.613709	NA	0.696	NA	5.0735506
1145	2	33500848	33500848	A	G	intronic	LTBP1	NA	NA	NA	intronic	ENSG00000049323	NA	NA	NA	NA	NA	2p22.3	NA	Name=c-Fos,c-Jun,TCF4,GABP,FOXA1_(C-20),FOSL2,ELF1_(SC-631),FOXA1_(SC-101058),ZBTB7A_(SC-34508),GR	Name=122	NA	rs3816479	0.21	0.21	0.213	0.183906	0.33	0.2431	0.2003	0.0166	0.1871	0.34	0.22	0.2	0.03	0.2705	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.147435	NA	NA	0.326279	0.067408	NA	0.196	NA	5.073221
1145	14	95923670	95923670	A	C	exonic	SYNE3	NA	synonymous SNV	SYNE3:NM_152592:exon4:c.T633G:p.R211R	exonic	ENSG00000176438	NA	synonymous SNV	ENSG00000176438:ENST00000334258:exon4:c.T633G:p.R211R,ENSG00000176438:ENST00000553340:exon4:c.T633G:p.R211R,ENSG00000176438:ENST00000557275:exon4:c.T633G:p.R211R	NA	NA	14q32.13	NA	Name=Pol2	NA	NA	rs2024863	0.61	0.61	0.591	0.624002	0.508	0.5813	0.6873	0.7806	0.5307	0.51	0.59	0.67	0.75	0.572	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.776131	NA	NA	0.513721	0.735588	NA	0.667	NA	5.0729456
1145	5	78340257	78340257	C	G	exonic	DMGDH	NA	synonymous SNV	DMGDH:NM_013391:exon6:c.G864C:p.L288L	exonic	ENSG00000132837	NA	synonymous SNV	ENSG00000132837:ENST00000380311:exon3:c.G261C:p.L87L,ENSG00000132837:ENST00000523732:exon3:c.G381C:p.L127L,ENSG00000132837:ENST00000255189:exon6:c.G864C:p.L288L	Score=516;Name=lod=167	NA	5q14.1	NA	NA	NA	NA	rs248385	0.61	0.61	0.6	0.615216	0.506	0.7798	0.5879	0.6271	0.5613	0.5	0.78	0.61	0.58	0.5614	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.93437	NA	NA	0.526395	0.600999	NA	0.551	NA	5.0728716
1145	6	31322996	31322996	C	T	exonic	HLA-B	NA	synonymous SNV	HLA-B:NM_005514:exon5:c.G900A:p.P300P	exonic	ENSG00000234745	NA	synonymous SNV	ENSG00000234745:ENST00000412585:exon5:c.G900A:p.P300P	NA	NA	6p21.33	NA	Name=Pol2,Pol2-4H8	NA	NA	rs2074496	0.63	0.63	0.584	0.66254	0.5239	0.7063	0.6484	0.7315	0.6769	0.52	0.67	0.68	0.7	0.5759	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.017145	NA	NA	0.494094	0.676042	NA	0.587	NA	5.0727726
1145	22	17674117	17674117	C	T	intronic	CECR1	NA	NA	NA	ncRNA_exonic	ENSG00000236325	NA	NA	NA	Score=691;Name=lod=854	NA	22q11.1	NA	NA	NA	NA	rs4819973	0.17	0.17	0.154	0.196685	0.2614	0.0387	0.1859	0.233	0.2515	0.27	0.02	0.18	0.18	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.113884	NA	NA	NA	NA	NA	0.232	NA	5.0719333
1145	10	30901756	30901756	G	A	exonic	LYZL2	NA	synonymous SNV	LYZL2:NM_183058:exon4:c.C510T:p.N170N	exonic	ENSG00000151033	NA	synonymous SNV	ENSG00000151033:ENST00000375318:exon4:c.C510T:p.N170N	NA	NA	10p11.23	Score=782;Name=V$CDP_01	NA	NA	NA	rs9954	0.42	0.42	0.402	0.367612	0.5527	0.2639	0.4063	0.3464	0.2853	0.58	0.26	0.43	0.36	0.4826	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.072378	NA	NA	0.559767	0.411484	NA	0.391	NA	5.0715996
1145	9	37974743	37974743	T	C	exonic	SHB	NA	synonymous SNV	SHB:NM_003028:exon3:c.A930G:p.S310S	exonic	ENSG00000107338	NA	synonymous SNV	ENSG00000107338:ENST00000377707:exon3:c.A930G:p.S310S	NA	NA	9p13.2	NA	NA	Name=56	NA	rs1138374	0.62	0.62	0.616	0.621805	0.5328	0.7768	0.513	0.7156	0.5041	0.52	0.75	0.5	0.7	0.5462	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.537429	NA	NA	0.51616	0.688959	NA	0.609	NA	5.0715066
1145	9	32566400	32566400	A	T	ncRNA_exonic	TOPORS-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000232303,ENSG00000235453	NA	NA	NA	Score=600;Name=lod=367	NA	9p21.1	NA	NA	NA	NA	rs593700	0.48	0.48	0.471	0.514776	0.5954	0.2212	0.5187	0.6309	0.5746	0.58	0.22	0.54	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.411966	NA	NA	NA	NA	NA	0.623	NA	5.0712666
1145	1	235652513	235652513	T	C	exonic	B3GALNT2	NA	synonymous SNV	B3GALNT2:NM_152490:exon3:c.A321G:p.E107E,B3GALNT2:NM_001277155:exon4:c.A444G:p.E148E	exonic	ENSG00000162885	NA	synonymous SNV	ENSG00000162885:ENST00000366600:exon3:c.A321G:p.E107E,ENSG00000162885:ENST00000313984:exon4:c.A444G:p.E148E	Score=441;Name=lod=83	NA	1q42.3	NA	NA	NA	NA	rs291396	0.65	0.65	0.63	0.678714	0.5139	0.8413	0.7104	0.5893	0.7791	0.52	0.85	0.71	0.6	0.584	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.188677	NA	NA	0.498488	0.564685	NA	0.667	NA	5.0702786
1145	6	29142054	29142054	C	G	exonic	OR2J2	NA	synonymous SNV	OR2J2:NM_030905:exon1:c.C642G:p.L214L	exonic	ENSG00000204700	NA	synonymous SNV	ENSG00000204700:ENST00000377167:exon1:c.C642G:p.L214L	Score=251;Name=lod=14	NA	6p22.1	NA	NA	NA	NA	rs3129159	0.4	0.4	0.363	0.377995	0.5477	0.378	0.451	0.112	0.5112	0.58	0.37	0.46	0.12	0.5055	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.592115	NA	NA	0.543195	0.188432	NA	0.341	NA	5.0702716
1145	15	84408546	84408546	A	G	intronic	ADAMTSL3	NA	NA	NA	ncRNA_exonic	ENSG00000261665	NA	NA	NA	Score=608;Name=lod=396	NA	15q25.2	NA	NA	NA	NA	rs2585065	0.17	0.17	0.15	0.146965	0.2634	0.0605	0.3689	0.0197	0.1309	0.26	0.07	0.34	0.03	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.646525	NA	NA	NA	NA	NA	0.145	NA	5.0699333
1145	6	32784620	32784620	C	T	intronic	HLA-DOB	NA	NA	NA	intronic	ENSG00000241106,ENSG00000250264	NA	NA	NA	NA	NA	6p21.32	NA	Name=Pol2	Name=11	NA	rs2071472	0.3	0.3	0.278	0.308906	0.3082	0.3651	0.3487	0.1369	0.456	0.3	0.38	0.34	0.16	0.3308	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.50781	NA	NA	0.291067	0.156519	NA	0.232	NA	5.069933
1145	19	54848684	54848684	G	A	exonic	LILRA4	NA	synonymous SNV	LILRA4:NM_012276:exon5:c.C939T:p.D313D	exonic	ENSG00000239961	NA	synonymous SNV	ENSG00000239961:ENST00000595581:exon1:c.C36T:p.D12D,ENSG00000239961:ENST00000291759:exon5:c.C939T:p.D313D	NA	NA	19q13.42	NA	NA	NA	NA	rs8105624	0.21	0.21	0.164	0.196885	0.2008	0.2609	0.2075	0.1611	0.1677	0.21	0.21	0.23	0.18	0.2034	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.029385	NA	NA	0.192604	0.162648	NA	0.196	NA	5.0698626
1145	15	20874897	20874897	A	G	ncRNA_exonic	NBEAP1	NA	NA	NA	ncRNA_exonic	ENSG00000258590	NA	NA	NA	Score=659;Name=lod=635	NA	15q11.2	NA	NA	NA	NA	rs7497658	NA	NA	0.562	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5971	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.09485	NA	1	NA	NA	NA	0.58	NA	5.0695666
1145	2	196860081	196860081	C	A	intronic	DNAH7	NA	NA	NA	ncRNA_exonic	ENSG00000203435	NA	NA	NA	Score=624;Name=lod=459	NA	2q32.3	NA	NA	NA	NA	rs11681259	0.13	0.13	0.135	0.117812	0.2644	0.0427	0.1326	0.0098	0.18	0.27	0.03	0.15	0.02	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.060692	NA	NA	NA	NA	NA	0.181	NA	5.0689333
1145	15	20876515	20876515	A	G	ncRNA_exonic	NBEAP1	NA	NA	NA	ncRNA_exonic	ENSG00000258590	NA	NA	NA	Score=627;Name=lod=469	NA	15q11.2	NA	NA	NA	NA	rs6422240	NA	NA	0.561	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5984	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.256012	NA	0.79	NA	NA	NA	0.609	NA	5.0682666
1145	4	57798189	57798189	G	A	exonic	REST	NA	synonymous SNV	REST:NM_001193508:exon4:c.G3165A:p.A1055A,REST:NM_005612:exon4:c.G3165A:p.A1055A	exonic	ENSG00000084093	NA	synonymous SNV	ENSG00000084093:ENST00000309042:exon4:c.G3165A:p.A1055A	NA	NA	4q12	NA	NA	NA	NA	rs2227901	0.24	0.24	0.239	0.253594	0.1849	0.3661	0.2161	0.2595	0.227	0.19	0.35	0.19	0.23	0.2227	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.649333	NA	NA	0.190814	0.236269	NA	0.203	NA	5.0682526
1145	4	57460296	57460296	G	C	intronic	THEGL	NA	NA	NA	ncRNA_exonic	ENSG00000248590	NA	NA	NA	Score=540;Name=lod=209	NA	4q12	NA	NA	NA	NA	rs60400284	0.28	0.28	0.245	0.267772	0.2654	0.495	0.3256	0.0582	0.2781	0.26	0.46	0.31	0.07	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.524116	NA	NA	NA	NA	NA	0.304	NA	5.0679333
1145	7	48028512	48028512	G	C	intronic	SUN3	NA	NA	NA	intronic	ENSG00000164744	NA	NA	NA	NA	NA	7p12.3	NA	Name=CTCF_(SC-5916),CTCF_(C-20),Rad21,CTCF	Name=34	NA	rs3736547	0.29	0.29	0.258	0.253594	0.3082	0.4484	0.3458	0.0673	0.183	0.33	0.42	0.32	0.08	0.3073	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.576286	NA	NA	0.316818	0.122162	NA	0.304	NA	5.067682
1145	8	22069386	22069386	T	C	UTR3	BMP1	NM_006129:c.*145T>C	NA	NA	UTR3	ENSG00000168487	ENST00000306385:c.*145T>C,ENST00000354870:c.*2363T>C,ENST00000520970:c.*1470T>C,ENST00000520626:c.*3638T>C,ENST00000520982:c.*2573T>C	NA	NA	NA	NA	8p21.3	NA	Name=Pol2,Pol2-4H8,Egr-1,HEY1	NA	NA	rs7001	0.15	0.15	0.131	0.133986	0.2664	0.006	0.1239	0.143	0.1247	0.27	0.0035	0.14	0.13	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.863236	NA	NA	NA	NA	NA	0.21	NA	5.0669334
1145	8	82752291	82752291	A	G	UTR5	SNX16	NM_022133:c.-70T>C,NM_152837:c.-70T>C,NM_152836:c.-70T>C	NA	NA	UTR5	ENSG00000104497	ENST00000353788:c.-70T>C,ENST00000396330:c.-70T>C,ENST00000345957:c.-70T>C,ENST00000520618:c.-70T>C,ENST00000521810:c.-70T>C,ENST00000523757:c.-70T>C,ENST00000519119:c.-70T>C,ENST00000519817:c.-70T>C,ENST00000518183:c.-70T>C,ENST00000521773:c.-70T>C	NA	NA	Score=417;Name=lod=66	NA	8q21.13	NA	NA	NA	NA	rs12056632	0.27	0.27	0.258	0.28155	0.2664	0.377	0.3184	0.1029	0.4141	0.28	0.37	0.31	0.13	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.073214	3.073214	NA	NA	NA	NA	0.217	NA	5.0669334
1145	8	82720351	82720351	C	A	intronic	SNX16	NA	NA	NA	ncRNA_exonic	ENSG00000231942	NA	NA	NA	Score=671;Name=lod=708	NA	8q21.13	NA	NA	NA	NA	rs2600603	0.27	0.27	0.249	0.28155	0.2664	0.377	0.3184	0.1029	0.4141	0.28	0.37	0.31	0.13	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.850117	1.850117	0.05	NA	NA	NA	0.217	NA	5.0669333
1145	8	82720404	82720404	T	C	intronic	SNX16	NA	NA	NA	ncRNA_exonic	ENSG00000231942	NA	NA	NA	Score=671;Name=lod=708	NA	8q21.13	NA	NA	NA	NA	rs2635487	0.27	0.27	0.265	0.28155	0.2664	0.377	0.3184	0.1029	0.4141	0.28	0.37	0.31	0.13	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.771395	NA	0.43	NA	NA	NA	0.217	NA	5.0669333
1145	19	19136541	19136541	C	T	exonic	SUGP2	NA	nonsynonymous SNV	SUGP2:NM_001017392:exon3:c.G616A:p.G206S,SUGP2:NM_014884:exon3:c.G616A:p.G206S	exonic	ENSG00000064607	NA	nonsynonymous SNV	ENSG00000064607:ENST00000330854:exon3:c.G616A:p.G206S,ENSG00000064607:ENST00000337018:exon3:c.G616A:p.G206S,ENSG00000064607:ENST00000452918:exon3:c.G616A:p.G206S,ENSG00000064607:ENST00000594773:exon3:c.G616A:p.G206S,ENSG00000064607:ENST00000600239:exon3:c.G616A:p.G206S,ENSG00000064607:ENST00000600377:exon3:c.G658A:p.G220S,ENSG00000064607:ENST00000601879:exon3:c.G616A:p.G206S	NA	NA	19p13.11	NA	NA	NA	NA	rs4808907	0.78	0.78	0.786	0.78774	0.7684	0.881	0.8012	0.7398	0.7669	0.75	0.87	0.77	0.72	0.7552	0.87	0.59	T	0.001	B	0.001	B	0.031	N	1.000	P	-0.345	N	3.11	T	-1.069	T	0.000	T	0.052	-1.97	0.007	-0.724	-0.931	-0.082	8.138	-1.969664	NA	0.8	0.743023	0.687245	NA	0.623	NA	5.0667104
1145	11	113103996	113103996	T	G	exonic	NCAM1	NA	synonymous SNV	NCAM1:NM_000615:exon13:c.T1620G:p.V540V,NCAM1:NM_001076682:exon13:c.T1620G:p.V540V,NCAM1:NM_001242608:exon13:c.T1620G:p.V540V,NCAM1:NM_181351:exon14:c.T1650G:p.V550V,NCAM1:NM_001242607:exon15:c.T1728G:p.V576V	exonic	ENSG00000149294	NA	synonymous SNV	ENSG00000149294:ENST00000531817:exon2:c.T150G:p.V50V,ENSG00000149294:ENST00000316851:exon12:c.T1620G:p.V540V,ENSG00000149294:ENST00000524665:exon12:c.T1797G:p.V599V,ENSG00000149294:ENST00000533760:exon12:c.T1266G:p.V422V,ENSG00000149294:ENST00000401611:exon13:c.T1647G:p.V549V	Score=300;Name=lod=22	NA	11q23.2	NA	NA	NA	NA	rs584427	0.65	0.65	0.669	0.667931	0.506	0.7312	0.5014	0.9077	0.5634	0.52	0.71	0.47	0.91	0.561	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.005365	NA	NA	0.532977	0.854207	NA	0.652	NA	5.0666896
1145	6	31079236	31079236	G	A	exonic	C6orf15	NA	synonymous SNV	C6orf15:NM_014070:exon2:c.C900T:p.V300V	exonic	ENSG00000204542	NA	synonymous SNV	ENSG00000204542:ENST00000259870:exon2:c.C900T:p.V300V	NA	NA	6p21.33	NA	NA	Name=2	NA	rs1265055	0.52	0.52	0.496	0.531749	0.5139	0.4871	0.5663	0.5461	0.5521	0.5	0.47	0.57	0.56	0.537	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.161191	NA	NA	0.549096	0.574042	NA	0.572	NA	5.0666706
1145	17	56636908	56636908	T	C	exonic	TEX14	NA	synonymous SNV	TEX14:NM_031272:exon30:c.A4173G:p.K1391K,TEX14:NM_001201457:exon31:c.A4311G:p.K1437K,TEX14:NM_198393:exon31:c.A4293G:p.K1431K	exonic	ENSG00000121101	NA	synonymous SNV	ENSG00000121101:ENST00000349033:exon30:c.A4173G:p.K1391K,ENSG00000121101:ENST00000240361:exon31:c.A4311G:p.K1437K,ENSG00000121101:ENST00000389934:exon31:c.A4293G:p.K1431K	NA	NA	17q22	NA	NA	NA	NA	rs9903050	0.23	0.23	0.223	0.276558	0.1978	0.3036	0.1182	0.3359	0.362	0.19	0.27	0.14	0.33	0.2177	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.476885	NA	NA	0.184535	0.294144	NA	0.145	NA	5.0666316
1145	1	152277396	152277396	T	C	exonic	FLG	NA	synonymous SNV	FLG:NM_002016:exon3:c.A9966G:p.Q3322Q	exonic	ENSG00000143631	NA	synonymous SNV	ENSG00000143631:ENST00000368799:exon3:c.A9966G:p.Q3322Q	NA	NA	1q21.3	NA	NA	NA	NA	rs6681433	0.31	0.31	0.275	0.341054	0.171	0.6062	0.4193	0.115	0.4928	0.17	0.62	0.35	0.13	0.2611	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.335954	NA	NA	0.168256	0.132093	NA	0.181	NA	5.0663106
1145	1	17017734	17017734	C	T	ncRNA_exonic	ESPNP	NA	NA	NA	ncRNA_exonic	ENSG00000268869	NA	NA	NA	Score=586;Name=lod=321	NA	1p36.13	NA	NA	NA	NA	rs12561805	NA	NA	0.194	0.290136	0.2913	0.4425	0.3184	0.1589	0.2894	NA	NA	NA	NA	0.3092	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.256877	1.256877	NA	NA	NA	NA	0.196	NA	5.0661666
1146	18	24180263	24180263	G	A	intronic	KCTD1	NA	NA	NA	ncRNA_exonic	ENSG00000263846	NA	NA	NA	Score=564;Name=lod=261	NA	18q11.2	NA	NA	NA	NA	rs73944644	0.18	0.18	0.185	0.18111	0.2684	0.1062	0.1657	0.1641	0.2025	0.25	0.08	0.2	0.18	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.382709	NA	NA	NA	NA	NA	0.13	NA	5.0649333
1146	8	53555069	53555069	A	G	exonic	RB1CC1	NA	synonymous SNV	RB1CC1:NM_001083617:exon18:c.T4179C:p.R1393R,RB1CC1:NM_014781:exon18:c.T4179C:p.R1393R	exonic	ENSG00000023287	NA	synonymous SNV	ENSG00000023287:ENST00000539297:exon16:c.T4179C:p.R1393R,ENSG00000023287:ENST00000025008:exon18:c.T4179C:p.R1393R,ENSG00000023287:ENST00000435644:exon18:c.T4179C:p.R1393R	NA	NA	8q11.23	NA	NA	NA	NA	rs2305427	0.33	0.33	0.308	0.28754	0.2048	0.6548	0.3199	0.0885	0.2403	0.21	0.69	0.29	0.12	0.231	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.915682	NA	NA	0.166163	0.091012	NA	0.304	NA	5.0647036
1146	7	5569327	5569327	G	A	intronic	ACTB	NA	NA	NA	intronic	ENSG00000075624	NA	NA	NA	NA	NA	7p22.1	NA	Name=CTCF,p300,ELF1_(SC-631),Rad21,Oct-2,Pol2,Pol2(phosphoS2),SMC3_(ab9263),YY1_(C-20),TAF7_(SQ-8),GATA3_(SC-268),E2F6,GATA-1,TAF1,ETS1,CTCFL_(SC-98982),POU2F2,GABP,HMGN3,ZBTB33,IRF1,GATA2_(CG2-96),CCNT2,HEY1,NFKB,SRF,MafK_(ab50322),CTCF_(SC-5916),Egr-1,Sin3Ak-20,Pol2-4H8,Pol2(b),ELK4	Name=146	NA	rs2908425	0.29	0.29	0.264	0.28754	0.3062	0.1845	0.3141	0.3517	0.2689	0.3	0.18	0.35	0.36	0.3263	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.115384	NA	NA	0.3028	0.305017	NA	0.196	NA	5.0647
1146	2	201437214	201437214	A	G	exonic	SGOL2	NA	synonymous SNV	SGOL2:NM_001160033:exon7:c.A2145G:p.K715K,SGOL2:NM_001160046:exon7:c.A2145G:p.K715K,SGOL2:NM_152524:exon7:c.A2145G:p.K715K	exonic	ENSG00000163535	NA	synonymous SNV	ENSG00000163535:ENST00000357799:exon7:c.A2145G:p.K715K	NA	NA	2q33.1	NA	NA	NA	NA	rs17532679	0.12	0.12	0.127	0.123802	0.2207	0.0794	0.1138	0.0711	0.1483	0.2	0.07	0.11	0.07	0.1814	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.096436	NA	NA	0.200123	0.097406	ID=COSM149040;OCCURENCE=1(stomach)	0.116	NA	5.0644436
1146	1	161654693	161654693	A	G	ncRNA_exonic	RPL31P11	NA	NA	NA	ncRNA_exonic	ENSG00000213075	NA	NA	NA	Score=719;Name=lod=1112	NA	1q23.3	NA	NA	NA	NA	rs1256287	0.6	0.6	0.568	0.579073	0.6024	0.7242	0.6859	0.379	0.6002	0.6	0.72	0.66	0.4	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.724117	1.724117	NA	NA	NA	NA	0.638	NA	5.0642666
1146	12	104698582	104698582	A	G	exonic	EID3	NA	synonymous SNV	EID3:NM_001008394:exon1:c.A870G:p.Q290Q	exonic	ENSG00000255150	NA	synonymous SNV	ENSG00000255150:ENST00000527879:exon1:c.A870G:p.Q290Q	NA	NA	12q23.3	NA	NA	Name=37	NA	rs11111987	0.5	0.5	0.482	0.494609	0.5258	0.6111	0.5216	0.3623	0.502	0.5	0.6	0.51	0.36	0.526	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.304477	NA	NA	0.550608	0.411686	NA	0.565	NA	5.0642586
1146	1	152276889	152276889	A	G	exonic	FLG	NA	synonymous SNV	FLG:NM_002016:exon3:c.T10473C:p.N3491N	exonic	ENSG00000143631	NA	synonymous SNV	ENSG00000143631:ENST00000368799:exon3:c.T10473C:p.N3491N	NA	NA	1q21.3	NA	NA	NA	NA	rs3126067	0.44	0.44	0.43	0.522564	0.1511	0.6498	0.4553	0.7912	0.4581	0.15	0.61	0.37	0.74	0.3007	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.436513	NA	NA	0.151036	0.68906	NA	0.275	NA	5.0638306
1146	12	123344910	123344910	A	C	intronic	HIP1R	NA	NA	NA	intronic	ENSG00000130787	NA	NA	NA	NA	NA	12q24.31	NA	Name=Rad21,Oct-2,CTCF,Znf143_(16618-1-AP),CTCFL_(SC-98982),GABP,POU2F2,SMC3_(ab9263),YY1_(C-20),CTCF_(C-20),CTCF_(SC-5916),Pol2-4H8,HDAC2_(SC-6296),Pbx3	Name=141	NA	rs937765	0.95	0.95	0.942	0.934904	0.9364	0.9901	0.9798	0.9319	0.8487	0.93	0.99	0.97	0.93	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.43687	NA	NA	NA	NA	NA	0.891	NA	5.0636
1146	13	38357471	38357471	G	A	UTR5	TRPC4	NM_001135958:c.-1C>T,NM_001135957:c.-1C>T,NM_001135956:c.-1C>T,NM_003306:c.-1C>T,NM_001135955:c.-1C>T,NM_016179:c.-1C>T	NA	NA	UTR5	ENSG00000133107	ENST00000379705:c.-1C>T,ENST00000338947:c.-1C>T,ENST00000379681:c.-1C>T,ENST00000426868:c.-1C>T,ENST00000379673:c.-1C>T,ENST00000358477:c.-1C>T,ENST00000355779:c.-1C>T,ENST00000447043:c.-1C>T	NA	NA	Score=611;Name=lod=406	NA	13q13.3	Score=795;Name=V$BACH1_01	NA	NA	NA	rs3904512	0.35	0.35	0.371	0.363019	0.4205	0.2183	0.3329	0.4304	0.3834	0.41	0.23	0.36	0.4	0.404	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.886452	2.886452	NA	0.445452	0.434862	NA	0.406	NA	5.0633814
1146	1	165551490	165551490	C	T	upstream	LOC400794	NA	NA	NA	ncRNA_exonic	ENSG00000237783	NA	NA	NA	Score=809;Name=lod=2581	NA	1q24.1	NA	NA	NA	NA	rs7512192	0.07	0.07	0.073	0.0587061	0.1034	NA	0.062	0.1014	0.0133	0.1	NA	0.06	0.1	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.234227	NA	NA	NA	NA	NA	0.065	NA	5.0632666
1146	16	81061827	81061827	G	A	exonic	CENPN	NA	nonsynonymous SNV	CENPN:NM_001270473:exon9:c.G802A:p.E268K,CENPN:NM_001270474:exon9:c.G760A:p.E254K,CENPN:NM_001100624:exon10:c.G862A:p.E288K,CENPN:NM_001100625:exon10:c.G862A:p.E288K	exonic	ENSG00000166451	NA	nonsynonymous SNV	ENSG00000166451:ENST00000428963:exon9:c.G760A:p.E254K,ENSG00000166451:ENST00000439957:exon9:c.G802A:p.E268K,ENSG00000166451:ENST00000305850:exon10:c.G862A:p.E288K,ENSG00000166451:ENST00000393335:exon10:c.G862A:p.E288K	NA	NA	16q23.2	NA	NA	NA	NA	rs2549887	0.59	0.59	0.561	0.597244	0.7694	0.5456	0.6412	0.32	0.817	0.77	0.54	0.64	0.34	0.7104	0.79	0.74	T	0.001	B	0.007	B	0.012	N	0.003	P	-0.18	N	2.02	T	-1.025	T	0.000	T	0.05	1.036	9.231	-1.92	-0.569	0.124	8.592	1.035856	NA	0.58	0.790598	0.40365	NA	0.638	NA	5.0629354
1146	5	134871440	134871440	A	C	UTR5	NEUROG1	NM_006161:c.-60T>G	NA	NA	UTR5	ENSG00000181965	ENST00000314744:c.-60T>G	NA	NA	NA	NA	5q31.1	NA	Name=SUZ12	NA	NA	rs8192558	0.19	0.19	0.19	0.207668	0.2704	0.2063	0.2305	0.0877	0.2904	0.26	0.18	0.21	0.08	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.125587	NA	NA	NA	NA	NA	0.087	NA	5.0629334
1146	8	141568622	141568622	G	A	exonic	AGO2	NA	synonymous SNV	AGO2:NM_001164623:exon7:c.C840T:p.R280R,AGO2:NM_012154:exon7:c.C840T:p.R280R	exonic	ENSG00000123908	NA	synonymous SNV	ENSG00000123908:ENST00000220592:exon7:c.C840T:p.R280R,ENSG00000123908:ENST00000519980:exon7:c.C840T:p.R280R	NA	NA	8q24.3	NA	NA	Name=12	NA	rs2292778	0.62	0.62	0.617	0.655551	0.493	0.6022	0.6095	0.8691	0.6217	0.5	0.6	0.59	0.84	0.5789	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.738365	NA	NA	0.532442	0.815252	NA	0.652	NA	5.0623246
1146	12	13154790	13154790	G	C	ncRNA_exonic	HTR7P1	NA	NA	NA	ncRNA_exonic	ENSG00000183935	NA	NA	NA	Score=756;Name=lod=1582	NA	12p13.1	NA	NA	NA	NA	rs1291363	0.44	0.44	0.422	0.429513	0.6044	0.378	0.4827	0.1899	0.589	0.61	0.38	0.49	0.22	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.822199	1.822199	NA	NA	NA	NA	0.377	NA	5.0622666
1146	5	137603293	137603293	G	A	intronic	GFRA3	NA	NA	NA	ncRNA_exonic	ENSG00000249851	NA	NA	NA	Score=692;Name=lod=864	NA	5q31.2	NA	NA	NA	NA	rs33967909	0.34	0.34	0.327	0.324281	0.2714	0.6121	0.2637	0.2693	0.1994	0.27	0.59	0.23	0.26	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.879607	NA	NA	NA	NA	NA	0.261	NA	5.0619333
1146	12	113416653	113416653	G	A	intronic	OAS2	NA	NA	NA	ncRNA_intronic	ENSG00000257452	NA	NA	NA	NA	NA	12q24.13	NA	Name=YY1_(C-20),Pol2,Pol2-4H8	NA	NA	rs2384075	0.29	0.29	0.291	0.29992	0.2714	0.0843	0.366	0.5098	0.2209	0.28	0.11	0.32	0.51	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.610724	NA	NA	NA	NA	NA	0.319	NA	5.0619333
1146	4	40438576	40438576	A	G	exonic	RBM47	NA	synonymous SNV	RBM47:NM_001098634:exon5:c.T1212C:p.G404G	exonic	ENSG00000163694	NA	synonymous SNV	ENSG00000163694:ENST00000381793:exon4:c.T1212C:p.G404G,ENSG00000163694:ENST00000514014:exon4:c.T1098C:p.G366G,ENSG00000163694:ENST00000295971:exon5:c.T1212C:p.G404G	Score=682;Name=lod=788	NA	4p14	Score=931;Name=V$TATA_01	NA	NA	NA	rs2307046	0.82	0.82	0.814	0.805112	0.8698	0.7669	0.8516	0.7088	0.8753	0.87	0.8	0.84	0.75	0.8534	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.293525	1.293525	NA	0.881794	0.7384	NA	0.841	NA	5.0616726
1146	2	239140728	239140728	A	G	ncRNA_exonic	LOC643387	NA	NA	NA	ncRNA_exonic	ENSG00000225057	NA	NA	NA	Score=672;Name=lod=719	NA	2q37.3	NA	NA	NA	NA	rs11689033	0.21	0.21	0.168	0.167931	0.335	0.121	0.2478	0.0212	0.1861	0.34	0.12	0.3	0.02	0.2708	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.292124	NA	NA	NA	NA	NA	0.21	NA	5.0608666
1146	19	38817486	38817486	T	C	exonic	KCNK6	NA	synonymous SNV	KCNK6:NM_004823:exon2:c.T576C:p.F192F	exonic	ENSG00000099337	NA	synonymous SNV	ENSG00000099337:ENST00000263372:exon2:c.T576C:p.F192F	NA	NA	19q13.2	NA	NA	NA	NA	rs3745951	0.18	0.18	0.126	0.178914	0.2217	0.1518	0.2507	0.0673	0.2628	0.23	0.15	0.25	0.09	0.1979	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.059807	NA	NA	0.186395	0.088289	NA	0.159	NA	5.0606716
1146	19	41601896	41601896	C	G	UTR3	CYP2A13	NM_000766:c.*50C>G	NA	NA	UTR3	ENSG00000197838	ENST00000330436:c.*50C>G	NA	NA	NA	NA	19q13.2	NA	Name=E2F6	NA	NA	rs1709083	0.13	0.13	0.064	0.152756	0.0994	0.0198	0.2464	0.2595	0.1339	0.1	0.02	0.19	0.27	0.1107	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.217061	NA	NA	0.063622	0.194622	NA	0.051	NA	5.0596114
1146	8	95906554	95906554	C	G	intronic	CCNE2	NA	NA	NA	intronic	ENSG00000175305	NA	NA	NA	NA	NA	8q22.1	NA	Name=Sin3Ak-20	Name=27	NA	rs2466431	0.95	0.95	0.95	0.952276	0.9404	0.9028	0.9827	0.9992	0.9305	0.94	0.89	0.99	1	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.828897	NA	NA	NA	NA	NA	0.971	NA	5.0596
1146	13	25591842	25591842	G	T	intergenic	TPTE2P1,PABPC3	dist=49235;dist=78434	NA	NA	downstream	ENSG00000269099	NA	NA	NA	Score=642;Name=lod=543	NA	13q12.13	NA	Name=ZNF263	NA	NA	rs4328299	0.44	0.44	0.406	0.459864	0.4404	0.4077	0.4366	0.5219	0.4663	0.44	0.38	0.44	0.52	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.066451	NA	NA	NA	NA	NA	0.572	NA	5.0596
1146	13	25591849	25591849	C	T	intergenic	TPTE2P1,PABPC3	dist=49242;dist=78427	NA	NA	downstream	ENSG00000269099	NA	NA	NA	Score=642;Name=lod=543	NA	13q12.13	NA	Name=ZNF263	NA	NA	rs4488308	0.46	0.46	0.429	0.47524	0.4404	0.4623	0.4625	0.5242	0.4673	0.44	0.45	0.46	0.52	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.157486	NA	NA	NA	NA	NA	0.58	NA	5.0596
1146	11	56510694	56510694	T	C	exonic	OR9G4	NA	synonymous SNV	OR9G4:NM_001005284:exon1:c.A594G:p.P198P	exonic	ENSG00000172457	NA	synonymous SNV	ENSG00000172457:ENST00000302957:exon1:c.A594G:p.P198P	NA	NA	11q12.1	NA	NA	NA	NA	rs1397053	0.14	0.14	0.149	0.130192	0.2147	0.0119	0.1268	0.2035	0.0685	0.22	0.01	0.11	0.21	0.1721	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.496645	NA	NA	0.220321	0.214902	NA	0.116	NA	5.0595456
1146	9	135374898	135374898	T	C	exonic	C9orf171	NA	synonymous SNV	C9orf171:NM_207417:exon4:c.T543C:p.N181N	exonic	ENSG00000188523	NA	synonymous SNV	ENSG00000188523:ENST00000393215:exon3:c.T435C:p.N145N,ENSG00000188523:ENST00000393216:exon3:c.T435C:p.N145N,ENSG00000188523:ENST00000343036:exon4:c.T543C:p.N181N	NA	NA	9q34.13	Score=912;Name=V$TCF11_01	NA	NA	NA	rs562350	0.67	0.67	0.654	0.678315	0.4831	0.8254	0.572	0.8533	0.5665	0.5	0.82	0.57	0.81	0.5875	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.495281	NA	NA	0.536628	0.796414	ID=COSM1132566;OCCURENCE=1(liver),1(prostate)	0.667	NA	5.0594386
1146	4	123664919	123664919	A	G	exonic	BBS12	NA	synonymous SNV	BBS12:NM_152618:exon2:c.A1872G:p.Q624Q,BBS12:NM_001178007:exon3:c.A1872G:p.Q624Q	exonic	ENSG00000181004	NA	synonymous SNV	ENSG00000181004:ENST00000314218:exon2:c.A1872G:p.Q624Q,ENSG00000181004:ENST00000542236:exon3:c.A1872G:p.Q624Q	NA	NA	4q27	NA	NA	NA	NA	rs13102440	0.11	0.11	0.105	0.091853	0.2127	NA	0.1052	0.0484	0.1115	0.22	NA	0.12	0.06	0.1693	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.530585	NA	NA	0.225581	0.065592	NA	0.116	NA	5.0590856
1146	2	71061108	71061108	G	A	exonic	CD207	NA	synonymous SNV	CD207:NM_015717:exon3:c.C234T:p.V78V	exonic	ENSG00000116031	NA	synonymous SNV	ENSG00000116031:ENST00000410009:exon3:c.C234T:p.V78V	NA	NA	2p13.3	NA	NA	NA	NA	rs17662453	0.14	0.14	0.133	0.142173	0.1839	0.0972	0.219	0.1059	0.1401	0.18	0.08	0.18	0.12	0.2088	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.06288	NA	NA	0.215542	0.120112	NA	0.087	NA	5.0584246
1146	3	133670073	133670073	T	C	exonic	SLCO2A1	NA	synonymous SNV	SLCO2A1:NM_005630:exon6:c.A840G:p.R280R	exonic	ENSG00000174640	NA	synonymous SNV	ENSG00000174640:ENST00000493729:exon5:c.A612G:p.R204R,ENSG00000174640:ENST00000310926:exon6:c.A840G:p.R280R,ENSG00000174640:ENST00000481359:exon6:c.A840G:p.R280R	NA	NA	3q22.1	NA	NA	NA	NA	rs6767412	0.25	0.25	0.249	0.254393	0.1909	0.2827	0.2421	0.3215	0.2086	0.21	0.27	0.25	0.32	0.2283	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.134304	NA	NA	0.189186	0.316614	ID=COSM149475;OCCURENCE=1(stomach)	0.174	NA	5.0582806
1146	9	98231008	98231008	A	G	ncRNA_exonic	LOC100507346	NA	NA	NA	intronic	ENSG00000185920	NA	NA	NA	NA	Name=Pulmonary function (interaction),Pulmonary function	9q22.32	NA	NA	NA	NA	rs16909898	0.1	0.1	0.102	0.0878594	0.0974	0.0843	0.0692	0.1309	0.0368	0.11	0.1	0.07	0.12	0.0881	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.894759	NA	NA	0.089651	0.138901	ID=COSM14468;OCCURENCE=1(skin)	0.058	NA	5.0581823
1146	16	20335325	20335325	G	A	exonic	GP2	NA	synonymous SNV	GP2:NM_001007240:exon3:c.C348T:p.D116D,GP2:NM_001502:exon3:c.C348T:p.D116D	exonic	ENSG00000169347	NA	synonymous SNV	ENSG00000169347:ENST00000572347:exon2:c.C84T:p.D28D,ENSG00000169347:ENST00000302555:exon3:c.C348T:p.D116D,ENSG00000169347:ENST00000381362:exon3:c.C348T:p.D116D,ENSG00000169347:ENST00000572478:exon3:c.C153T:p.D51D,ENSG00000169347:ENST00000575449:exon3:c.C348T:p.D116D	NA	NA	16p12.3	NA	NA	NA	NA	rs12930599	0.1	0.1	0.101	0.0826677	0.2256	0.0089	0.1772	0.0068	0.047	0.21	0.0035	0.17	0.01	0.1637	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.254257	NA	NA	0.219767	0.046527	NA	0.101	NA	5.0575996
1146	17	36375227	36375227	C	T	ncRNA_intronic	LOC440434	NA	NA	NA	intronic	ENSG00000174093	NA	NA	NA	NA	NA	17q12	NA	NA	Name=19	NA	rs2271169	NA	NA	0.28	0.212061	0.1133	0.2867	0.2262	0.3109	0.093	NA	NA	NA	NA	0.1629	0.054	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.122829	NA	NA	NA	NA	NA	0.043	NA	5.0571333
1146	12	62861111	62861111	T	C	intronic	MON2	NA	NA	NA	intronic	ENSG00000061987	NA	NA	NA	NA	NA	12q14.1	Score=976;Name=V$CREB_01	Name=Mxi1_(bHLH),AP-2gamma,ZEB1_(SC-25388),Sin3Ak-20,HA-E2F1,AP-2alpha	Name=24	NA	rs6581450	0.69	0.69	0.695	0.689497	0.6501	0.623	0.67	0.8048	0.6564	0.65	0.65	0.7	0.79	0.6505	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.634447	1.634447	NA	0.642558	0.785293	NA	0.667	NA	5.056842
1146	5	118556350	118556350	C	T	intronic	DMXL1	NA	NA	NA	intronic	ENSG00000172869	NA	NA	NA	NA	NA	5q23.1	NA	Name=PU.1	Name=5	NA	rs2271059	0.89	0.89	0.883	0.887181	0.9433	0.8631	0.9524	0.8116	0.91	0.94	0.87	0.94	0.79	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.73296	NA	NA	NA	NA	NA	0.928	NA	5.0567
1146	8	124693410	124693410	G	C	UTR3	ANXA13	NM_004306:c.*70C>G,NM_001003954:c.*70C>G	NA	NA	UTR3	ENSG00000104537	ENST00000262219:c.*70C>G,ENST00000419625:c.*70C>G	NA	NA	NA	NA	8q24.13	NA	NA	Name=104	NA	rs4471017	0.25	0.25	0.208	0.248203	0.2773	0.0833	0.3516	0.2852	0.2648	0.28	0.1	0.37	0.29	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.093556	NA	NA	NA	NA	NA	0.37	NA	5.0560334
1146	12	56607927	56607927	C	T	intronic	RNF41	NA	NA	NA	intronic	ENSG00000181852	NA	NA	NA	NA	NA	12q13.3	NA	Name=GATA3_(SC-268)	Name=9	NA	rs4759218	0.8	0.8	0.785	0.774161	0.9443	0.9742	0.9006	0.2821	0.9683	0.94	0.97	0.9	0.33	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.120822	NA	NA	NA	NA	NA	0.746	NA	5.0557
1146	16	18861335	18861335	A	G	exonic	SMG1	NA	synonymous SNV	SMG1:NM_015092:exon35:c.T5397C:p.H1799H	exonic	ENSG00000157106	NA	synonymous SNV	ENSG00000157106:ENST00000565324:exon33:c.T5067C:p.H1689H,ENSG00000157106:ENST00000389467:exon35:c.T5397C:p.H1799H,ENSG00000157106:ENST00000446231:exon35:c.T5397C:p.H1799H	Score=435;Name=lod=78	NA	16p12.3	NA	NA	NA	NA	rs2650613	0.48	0.48	0.453	0.514976	0.5258	0.2242	0.5591	0.7307	0.4806	0.52	0.19	0.57	0.68	0.5214	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.547388	NA	NA	0.563877	0.726069	NA	0.551	NA	5.0555896
1146	3	135774361	135774361	G	A	intronic	PPP2R3A	NA	NA	NA	ncRNA_exonic	ENSG00000227267	NA	NA	NA	Score=661;Name=lod=645	NA	3q22.3	NA	NA	NA	NA	rs36039354	0.14	0.14	0.123	0.142572	0.2783	0.0258	0.1369	0.0575	0.2423	0.27	0.02	0.15	0.06	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.154804	NA	NA	NA	NA	NA	0.174	NA	5.0550333
1147	2	233320885	233320885	G	A	UTR5	ALPI	NM_001631:c.-25G>A	NA	NA	UTR5	ENSG00000163295	ENST00000295463:c.-25G>A,ENST00000457560:c.-25G>A	NA	NA	NA	NA	2q37.1	NA	NA	Name=5	NA	rs3762519	0.09	0.09	0.077	0.0890575	0.1064	0.0804	0.0764	0.0968	0.0787	0.1	0.08	0.08	0.09	0.0907	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.170262	NA	NA	0.082209	0.095778	NA	0.08	NA	5.0540244
1147	7	142749953	142749953	C	T	exonic	OR6V1	NA	synonymous SNV	OR6V1:NM_001001667:exon1:c.C516T:p.I172I	exonic	ENSG00000225781	NA	synonymous SNV	ENSG00000225781:ENST00000418316:exon1:c.C516T:p.I172I	NA	NA	7q34	NA	NA	NA	NA	rs11975892	0.27	0.27	0.307	0.292532	0.2018	0.0357	0.1974	0.6914	0.1789	0.2	0.04	0.21	0.69	0.2112	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.510957	NA	NA	0.199789	0.594575	NA	0.275	NA	5.0538776
1147	1	7889941	7889941	C	T	exonic	PER3	NA	synonymous SNV	PER3:NM_016831:exon18:c.C2907T:p.T969T	exonic	ENSG00000049246	NA	synonymous SNV	ENSG00000049246:ENST00000361923:exon18:c.C2907T:p.T969T,ENSG00000049246:ENST00000377532:exon18:c.C2934T:p.T978T	NA	NA	1p36.23	NA	NA	NA	NA	rs2640908	0.29	0.29	0.294	0.304313	0.1978	0.4851	0.1599	0.3154	0.3149	0.19	0.48	0.18	0.3	0.2269	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.301556	NA	NA	0.18814	0.302542	NA	0.297	NA	5.0538266
1147	15	52901284	52901284	T	C	exonic	FAM214A	NA	synonymous SNV	FAM214A:NM_019600:exon6:c.A1827G:p.S609S	exonic	ENSG00000047346	NA	synonymous SNV	ENSG00000047346:ENST00000399202:exon5:c.A1563G:p.S521S,ENSG00000047346:ENST00000546305:exon5:c.A1848G:p.S616S,ENSG00000047346:ENST00000261844:exon6:c.A1827G:p.S609S,ENSG00000047346:ENST00000534964:exon6:c.A1827G:p.S609S	NA	NA	15q21.3	NA	NA	NA	NA	rs58018557	0.4	0.4	0.458	0.49361	0.17	0.8869	0.317	0.6233	0.3712	0.13	0.78	0.25	0.51	0.2873	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.943353	NA	NA	0.155836	0.516894	NA	0.072	NA	5.0535306
1147	19	57999182	57999182	A	G	UTR5	ZNF419	NM_001098494:c.-137A>G,NM_001098496:c.-137A>G,NM_001098495:c.-137A>G,NM_001098493:c.-137A>G,NM_001098492:c.-137A>G,NM_001098491:c.-137A>G,NM_024691:c.-137A>G	NA	NA	UTR5	ENSG00000105136,ENSG00000268107	ENST00000354197:c.-137A>G,ENST00000426954:c.-137A>G,ENST00000442920:c.-137A>G,ENST00000519310:c.-3750A>G,ENST00000520540:c.-137A>G,ENST00000523882:c.-137A>G,ENST00000523312:c.-137A>G,ENST00000424930:c.-137A>G,ENST00000347466:c.-137A>G,ENST00000415379:c.-137A>G,ENST00000523138:c.-137A>G,ENST00000521754:c.-137A>G,ENST00000221735:c.-137A>G,ENST00000518999:c.-137A>G,ENST00000521137:c.-137A>G;ENST00000601674:c.-137A>G,ENST00000599674:c.-137A>G	NA	NA	NA	NA	19q13.43	NA	Name=GABP,TAF1,Pol2,STAT1,CHD2_(N-1250),Sin3Ak-20,c-Fos,Pol2-4H8,c-Myc,ZEB1_(SC-25388),HEY1,IRF3,TBP,IRF1	NA	NA	rs8113039	0.41	0.41	0.339	0.415735	0.2803	0.5823	0.4928	0.3056	0.4775	0.3	0.64	0.42	0.3	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.847919	NA	NA	NA	NA	NA	0.312	NA	5.0530334
1147	14	59112475	59112475	C	T	exonic	DACT1	NA	synonymous SNV	DACT1:NM_001079520:exon4:c.C1023T:p.V341V,DACT1:NM_016651:exon4:c.C1134T:p.V378V	exonic	ENSG00000165617	NA	synonymous SNV	ENSG00000165617:ENST00000335867:exon4:c.C1134T:p.V378V,ENSG00000165617:ENST00000395151:exon4:c.C291T:p.V97V,ENSG00000165617:ENST00000395153:exon4:c.C1023T:p.V341V,ENSG00000165617:ENST00000421793:exon4:c.C291T:p.V97V,ENSG00000165617:ENST00000541264:exon4:c.C291T:p.V97V,ENSG00000165617:ENST00000556859:exon4:c.C291T:p.V97V	NA	NA	14q23.1	NA	NA	NA	NA	rs863091	0.25	0.25	0.259	0.270966	0.1938	0.1498	0.3343	0.4342	0.2096	0.19	0.14	0.31	0.43	0.2272	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.311394	NA	NA	0.192907	0.36768	NA	0.254	NA	5.0527596
1147	14	24526206	24526206	T	C	exonic	LRRC16B	NA	synonymous SNV	LRRC16B:NM_138360:exon13:c.T1035C:p.P345P	exonic	ENSG00000186648	NA	synonymous SNV	ENSG00000186648:ENST00000342740:exon13:c.T1035C:p.P345P	NA	NA	14q11.2	NA	NA	NA	NA	rs45484702	0.21	0.21	0.194	0.215056	0.1859	0.38	0.1614	0.0673	0.3129	0.19	0.4	0.15	0.07	0.2178	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.834747	NA	NA	0.210581	0.092828	NA	0.283	NA	5.0523856
1147	16	3656482	3656482	C	T	exonic	SLX4	NA	synonymous SNV	SLX4:NM_032444:exon3:c.G753A:p.A251A	exonic	ENSG00000188827	NA	synonymous SNV	ENSG00000188827:ENST00000294008:exon3:c.G753A:p.A251A	NA	NA	16p13.3	NA	NA	NA	NA	rs8061528	0.25	0.25	0.252	0.230831	0.1978	0.2808	0.1902	0.2466	0.2209	0.22	0.31	0.2	0.27	0.2138	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.153458	NA	NA	0.203023	0.250114	NA	0.21	NA	5.0520436
1147	5	161119125	161119125	C	G	exonic	GABRA6	NA	synonymous SNV	GABRA6:NM_000811:exon8:c.C1005G:p.A335A	exonic	ENSG00000145863	NA	synonymous SNV	ENSG00000145863:ENST00000274545:exon8:c.C1005G:p.A335A,ENSG00000145863:ENST00000523217:exon8:c.C975G:p.A325A	Score=658;Name=lod=628	NA	5q34	NA	NA	NA	NA	rs13184586	0.43	0.43	0.442	0.401158	0.5736	0.3185	0.3732	0.3351	0.4182	0.57	0.34	0.37	0.37	0.4854	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.273742	NA	NA	0.556279	0.35497	NA	0.384	NA	5.0513876
1147	1	227452700	227452700	C	T	intronic	CDC42BPA	NA	NA	NA	ncRNA_exonic	ENSG00000236636	NA	NA	NA	Score=653;Name=lod=602	NA	1q42.13	NA	NA	NA	NA	rs1969230	0.35	0.35	0.329	0.32528	0.2823	0.3423	0.3602	0.3752	0.2597	0.29	0.38	0.36	0.38	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.233955	NA	NA	NA	NA	NA	0.312	NA	5.0510333
1147	1	227452751	227452751	C	T	intronic	CDC42BPA	NA	NA	NA	ncRNA_exonic	ENSG00000236636	NA	NA	NA	Score=653;Name=lod=602	NA	1q42.13	NA	NA	NA	NA	rs1533283	0.35	0.35	0.333	0.32528	0.2823	0.3423	0.3602	0.3752	0.2597	0.29	0.38	0.36	0.38	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.112752	NA	NA	NA	NA	NA	0.319	NA	5.0510333
1147	8	118185025	118185025	G	A	UTR3	SLC30A8	NM_001172811:c.*105G>A,NM_001172815:c.*105G>A,NM_001172813:c.*105G>A,NM_001172814:c.*105G>A,NM_173851:c.*105G>A	NA	NA	UTR3	ENSG00000164756	ENST00000521243:c.*105G>A,ENST00000427715:c.*105G>A,ENST00000456015:c.*105G>A	NA	NA	NA	Name=Type 2 diabetes	8q24.11	NA	NA	NA	NA	rs3802177	0.28	0.28	0.258	0.25619	0.2833	0.4613	0.2666	0.0756	0.2536	0.29	0.46	0.26	0.08	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.496228	NA	NA	NA	NA	NA	0.174	NA	5.0500334
1147	19	21608319	21608319	A	C	UTR3	ZNF493	NM_001076678:c.*533A>C,NM_175910:c.*533A>C	NA	NA	UTR3	ENSG00000196268	ENST00000392288:c.*533A>C,ENST00000355504:c.*533A>C	NA	NA	Score=405;Name=lod=59	NA	19p12	NA	NA	NA	NA	rs56080558	0.28	0.28	0.174	0.290335	0.2833	0.3413	0.3429	0.2421	0.273	0.3	0.3	0.29	0.21	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.966956	NA	NA	NA	NA	NA	0.304	NA	5.0500334
1147	2	170517594	170517594	C	T	intronic	CCDC173	NA	NA	NA	ncRNA_exonic	ENSG00000226072	NA	NA	NA	Score=619;Name=lod=438	NA	2q31.1	NA	NA	NA	NA	rs7575494	0.22	0.22	0.232	0.230831	0.2843	0.1577	0.1542	0.2678	0.2556	0.27	0.15	0.17	0.27	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.269408	NA	NA	NA	NA	NA	0.326	NA	5.0490333
1147	2	112141772	112141772	C	T	ncRNA_intronic	LOC541471	NA	NA	NA	ncRNA_exonic	ENSG00000223973	NA	NA	NA	Score=843;Name=lod=3545	NA	2q13	NA	NA	NA	NA	rs1040256	NA	NA	NA	0.636981	0.6183	0.4038	0.6729	0.8321	0.6074	NA	NA	NA	NA	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.120701	NA	NA	NA	NA	NA	0.688	NA	5.0483666
1147	2	233594875	233594875	G	A	intronic	GIGYF2	NA	NA	NA	ncRNA_exonic	ENSG00000213055	NA	NA	NA	Score=549;Name=lod=227	NA	2q37.1	NA	NA	NA	NA	rs13008942	0.29	0.29	0.266	0.359225	0.2853	0.3532	0.3055	0.2398	0.6411	0.28	0.32	0.29	0.25	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.146287	NA	NA	NA	NA	NA	0.312	NA	5.0480333
1147	21	47575372	47575372	C	T	intronic	FTCD	NA	NA	NA	intronic	ENSG00000160282	NA	NA	NA	NA	NA	21q22.3	NA	Name=Pol2,HEY1,Sin3Ak-20	NA	NA	rs2277820	0.41	0.41	0.359	0.403355	0.3111	0.7728	0.513	0.0787	0.4785	0.32	0.8	0.43	0.1	0.366	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.205279	NA	NA	0.275064	0.107955	NA	0.341	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000081451.1;CLNDSDB=.;CLNDSDBID=.	5.047836
1147	2	17962450	17962450	A	G	exonic	GEN1	NA	synonymous SNV	GEN1:NM_001130009:exon14:c.A1971G:p.E657E,GEN1:NM_182625:exon14:c.A1971G:p.E657E	exonic	ENSG00000178295	NA	synonymous SNV	ENSG00000178295:ENST00000317402:exon14:c.A1971G:p.E657E,ENSG00000178295:ENST00000381254:exon14:c.A1971G:p.E657E	Score=259;Name=lod=15	NA	2p24.2	NA	NA	NA	NA	rs300168	0.56	0.56	0.522	0.573882	0.5249	0.9226	0.6354	0.1536	0.7894	0.53	0.91	0.6	0.19	0.5758	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.939044	NA	NA	0.518372	0.246028	NA	0.514	NA	5.0475946
1147	12	18891079	18891079	T	C	UTR5	CAPZA3	NM_033328:c.-124T>C	NA	NA	UTR5	ENSG00000177938	ENST00000317658:c.-124T>C	NA	NA	Score=300;Name=lod=22	NA	12p12.3	NA	NA	NA	NA	rs1075421	0.38	0.38	0.368	0.398363	0.2863	0.3413	0.3703	0.5908	0.3323	0.29	0.33	0.36	0.57	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.08169	NA	NA	NA	NA	NA	0.377	NA	5.0470334
1147	16	69375658	69375658	G	A	UTR3	NIP7	NM_016101:c.*103G>A,NM_001199434:c.*103G>A	NA	NA	UTR3	ENSG00000132603	ENST00000254940:c.*103G>A,ENST00000254941:c.*103G>A,ENST00000567202:c.*108G>A,ENST00000562523:c.*230G>A	NA	NA	Score=295;Name=lod=21	NA	16q22.1	NA	NA	NA	NA	rs8053850	0.27	0.27	0.291	0.307109	0.2863	0.0833	0.2291	0.5023	0.3507	0.27	0.09	0.26	0.48	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.049898	2.049898	NA	NA	NA	NA	0.391	NA	5.0470334
1147	1	40428587	40428587	G	T	intronic	MFSD2A	NA	NA	NA	ncRNA_exonic	ENSG00000228477	NA	NA	NA	Score=796;Name=lod=2290	NA	1p34.2	NA	NA	NA	NA	rs3131699	0.32	0.32	0.226	0.343251	0.2863	0.5317	0.3963	0.112	0.4826	0.28	0.53	0.34	0.11	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.555347	NA	NA	NA	NA	NA	0.304	NA	5.0470333
1147	4	39975517	39975517	G	A	intronic	PDS5A	NA	NA	NA	ncRNA_intronic	ENSG00000231707	NA	NA	NA	Score=752;Name=lod=1522	NA	4p14	NA	NA	NA	NA	rs12512058	0.17	0.17	0.1	0.149161	0.2863	0.0417	0.3098	0.0182	0.182	0.28	0.04	0.35	0.02	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.029515	NA	NA	NA	NA	NA	0.232	NA	5.0470333
1147	5	77339846	77339846	G	A	intronic	AP3B1	NA	NA	NA	ncRNA_exonic	ENSG00000253558	NA	NA	NA	Score=676;Name=lod=746	NA	5q14.1	NA	NA	NA	NA	rs11746090	0.14	0.14	0.14	0.148562	0.2863	0.0258	0.1614	0.0151	0.3047	0.3	0.04	0.16	0.01	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.010026	NA	NA	NA	NA	NA	0.145	NA	5.0470333
1147	22	31298208	31298208	A	C	intronic	OSBP2	NA	NA	NA	ncRNA_exonic	ENSG00000237977	NA	NA	NA	Score=628;Name=lod=474	NA	22q12.2	NA	NA	NA	NA	rs12167144	0.41	0.41	0.384	0.407348	0.2863	0.5754	0.3357	0.528	0.2464	0.27	0.52	0.37	0.52	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.481763	NA	NA	NA	NA	NA	0.333	NA	5.0470333
1147	11	69063136	69063136	C	T	exonic	MYEOV	NA	synonymous SNV	MYEOV:NM_138768:exon3:c.C219T:p.A73A	exonic	ENSG00000172927	NA	synonymous SNV	ENSG00000172927:ENST00000535407:exon2:c.C45T:p.A15A,ENSG00000172927:ENST00000308946:exon3:c.C219T:p.A73A,ENSG00000172927:ENST00000441339:exon3:c.C219T:p.A73A	NA	NA	11q13.3	NA	NA	NA	NA	rs7117236	0.4	0.4	0.414	0.449281	0.169	0.4375	0.1902	0.854	0.3865	0.16	0.47	0.2	0.82	0.2755	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.369973	NA	NA	0.175477	0.720227	NA	0.514	NA	5.0466896
1147	4	8021417	8021417	A	G	intronic	ABLIM2	NA	NA	NA	intronic	ENSG00000163995	NA	NA	NA	NA	NA	4p16.1	NA	Name=GATA-2	Name=6	NA	rs34477140	0.2	0.2	0.179	0.171725	0.3529	0.0903	0.2133	0.0643	0.1851	0.36	0.06	0.22	0.08	0.2564	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.214535	2.214535	NA	0.344221	0.097577	NA	0.188	NA	5.046479
1147	11	56468493	56468493	A	G	exonic	OR9G1,OR9G9	NA	synonymous SNV	OR9G1:NM_001005213:exon1:c.A630G:p.A210A,OR9G9:NM_001013358:exon1:c.A630G:p.A210A	exonic	ENSG00000174914	NA	synonymous SNV	ENSG00000174914:ENST00000312153:exon1:c.A630G:p.A210A	NA	NA	11q12.1	NA	NA	NA	NA	rs10792053	0.51	0.51	0.465	0.158147	0.1163	0.122	0.121	0.2693	0.1145	0.5	0.49	0.51	0.56	0.504	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.413753	NA	NA	NA	NA	NA	0.384	NA	5.0463666
1147	1	91794744	91794744	C	T	intronic	HFM1	NA	NA	NA	ncRNA_exonic	ENSG00000215873	NA	NA	NA	Score=715;Name=lod=1070	NA	1p22.2	NA	NA	NA	NA	rs1974253	0.21	0.21	0.188	0.213259	0.2873	0.2669	0.1772	0.0227	0.365	0.28	0.29	0.18	0.03	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.50323	1.50323	NA	NA	NA	NA	0.232	NA	5.0460333
1147	10	64982172	64982172	G	T	intronic	JMJD1C	NA	NA	NA	ncRNA_exonic	ENSG00000234369	NA	NA	NA	Score=575;Name=lod=289	NA	10q21.3	NA	NA	NA	NA	rs34899893	0.14	0.14	0.131	0.117013	0.2883	0.0149	0.1513	0.025	0.1462	0.31	0.01	0.15	0.03	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.176007	NA	NA	NA	NA	NA	0.167	NA	5.0450333
1148	3	130743812	130743812	G	A	exonic	ASTE1	NA	synonymous SNV	ASTE1:NM_014065:exon3:c.C339T:p.Y113Y	exonic	ENSG00000034533	NA	synonymous SNV	ENSG00000034533:ENST00000264992:exon3:c.C339T:p.Y113Y,ENSG00000034533:ENST00000507978:exon3:c.C339T:p.Y113Y,ENSG00000034533:ENST00000514044:exon3:c.C339T:p.Y113Y	NA	NA	3q22.1	NA	NA	NA	NA	rs35558913	0.16	0.16	0.17	0.166534	0.2197	0.131	0.1369	0.1157	0.2382	0.21	0.13	0.13	0.14	0.1865	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.827617	NA	NA	0.215581	0.142306	NA	0.21	NA	5.0448856
1148	12	13154911	13154911	A	G	ncRNA_exonic	HTR7P1	NA	NA	NA	ncRNA_exonic	ENSG00000183935	NA	NA	NA	Score=756;Name=lod=1582	NA	12p13.1	NA	NA	NA	NA	rs1291362	0.58	0.58	0.555	0.583666	0.6223	0.5367	0.5187	0.5756	0.6493	0.63	0.55	0.52	0.58	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.836935	NA	0.09	NA	NA	NA	0.543	NA	5.0443666
1148	1	170959029	170959029	C	T	exonic	MROH9	NA	synonymous SNV	MROH9:NM_001163629:exon11:c.C913T:p.L305L,MROH9:NM_025063:exon11:c.C913T:p.L305L	exonic	ENSG00000117501	NA	synonymous SNV	ENSG00000117501:ENST00000367758:exon11:c.C913T:p.L305L,ENSG00000117501:ENST00000367759:exon11:c.C913T:p.L305L	NA	NA	1q24.3	NA	NA	NA	NA	rs16863922	0.21	0.21	0.215	0.20607	0.2227	0.001	0.1873	0.4047	0.1452	0.22	NA	0.21	0.42	0.1925	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.051174	NA	NA	0.20716	0.359556	NA	0.29	NA	5.0443066
1148	1	32096265	32096265	A	G	exonic	PEF1	NA	synonymous SNV	PEF1:NM_012392:exon5:c.T804C:p.I268I	exonic	ENSG00000162517	NA	synonymous SNV	ENSG00000162517:ENST00000373703:exon5:c.T804C:p.I268I	Score=579;Name=lod=301	NA	1p35.2	NA	NA	NA	NA	rs1061770	0.36	0.36	0.314	0.356829	0.5676	0.248	0.4741	0.0794	0.544	0.55	0.26	0.49	0.08	0.4955	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.379875	1.379875	NA	0.559419	0.165683	NA	0.413	NA	5.0441476
1148	5	7743787	7743787	C	T	exonic	ADCY2	NA	synonymous SNV	ADCY2:NM_020546:exon15:c.C1878T:p.S626S	exonic	ENSG00000078295	NA	synonymous SNV	ENSG00000078295:ENST00000537121:exon12:c.C1338T:p.S446S,ENSG00000078295:ENST00000338316:exon15:c.C1878T:p.S626S	NA	NA	5p15.31	Score=889;Name=V$HSF1_01	NA	NA	NA	rs62342477	0.33	0.33	0.323	0.323682	0.5755	0.0585	0.3199	0.2973	0.3763	0.55	0.05	0.37	0.31	0.469	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.227675	NA	NA	0.579419	0.340672	NA	0.406	NA	5.0427476
1148	10	124457452	124457452	C	T	exonic	C10orf120	NA	nonsynonymous SNV	C10orf120:NM_001010912:exon3:c.G805A:p.A269T	exonic	ENSG00000183559	NA	nonsynonymous SNV	ENSG00000183559:ENST00000329446:exon3:c.G805A:p.A269T	NA	NA	10q26.13	NA	NA	NA	NA	rs2947594	0.79	0.79	0.803	0.807708	0.7535	0.8095	0.7291	0.8359	0.8793	0.75	0.78	0.78	0.87	0.7823	0.87	0.86	T	0.0	B	0.0	B	0.848	N	1.000	P	-0.92	N	1.53	T	-1.013	T	0.000	T	0.019	-0.585	1.374	-1.81	-0.795	-0.758	6.548	-0.585199	NA	1	0.754884	0.847027	NA	0.761	NA	5.0426494
1148	19	8326904	8326904	G	A	exonic	CERS4	NA	nonsynonymous SNV	CERS4:NM_024552:exon12:c.G1096A:p.A366T	exonic	ENSG00000090661	NA	nonsynonymous SNV	ENSG00000090661:ENST00000559336:exon10:c.G832A:p.A278T,ENSG00000090661:ENST00000559450:exon11:c.G1096A:p.A366T,ENSG00000090661:ENST00000251363:exon12:c.G1096A:p.A366T,ENSG00000090661:ENST00000558331:exon12:c.G943A:p.A315T	NA	NA	19p13.2	NA	NA	NA	NA	rs36259	0.76	0.76	0.756	0.752995	0.7763	0.7986	0.7752	0.671	0.7771	0.76	0.84	0.76	0.64	0.7499	0.84	0.66	T	0.012	B	0.01	B	0.000	N	1.000	P	1.405	L	3.4	T	-0.986	T	0.000	T	0.054	0.75	7.977	0.913	0.357	0.869	2.328	0.750364	NA	0.69	0.76472	0.690054	NA	0.819	NA	5.0424134
1148	12	6554429	6554429	G	C	ncRNA_intronic	CD27-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000215039	NA	NA	NA	NA	NA	12p13.31	NA	NA	Name=2	NA	rs2534719	0.12	0.12	0.106	0.157149	0.1988	0.0546	0.1167	0.1127	0.3088	0.18	0.02	0.15	0.1	0.1958	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.506394	NA	NA	0.229767	0.134589	NA	0.174	NA	5.0422996
1148	16	48532560	48532560	A	G	intergenic	MIR548AE2,N4BP1	dist=112001;dist=40077	NA	NA	downstream	ENSG00000260347	NA	NA	NA	Score=588;Name=lod=327	NA	16q12.1	NA	NA	Name=3	NA	rs4785521	0.6	0.6	0.591	0.616014	0.4583	0.8383	0.6023	0.5877	0.5971	0.46	0.87	0.53	0.56	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.27284	NA	NA	NA	NA	NA	0.442	NA	5.0417
1148	11	105782654	105782654	C	T	UTR3	GRIA4	NM_001077244:c.*20C>T,NM_001112812:c.*20C>T	NA	NA	UTR3	ENSG00000152578	ENST00000393125:c.*20C>T,ENST00000428631:c.*20C>T	NA	NA	Score=726;Name=lod=1189	NA	11q22.3	NA	NA	NA	NA	rs72978094	0.11	0.11	0.07	0.0994409	0.1074	0.1438	0.2363	0.0159	0.0613	0.11	0.11	0.22	0.02	0.0981	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.883536	1.883536	NA	0.08638	0.030579	NA	0.065	NA	5.0414534
1148	1	229790048	229790048	A	G	exonic	URB2	NA	synonymous SNV	URB2:NM_014777:exon9:c.A4290G:p.R1430R	exonic	ENSG00000135763	NA	synonymous SNV	ENSG00000135763:ENST00000434387:exon2:c.A138G:p.R46R,ENSG00000135763:ENST00000258243:exon9:c.A4290G:p.R1430R	Score=492;Name=lod=133	NA	1q42.13	NA	NA	NA	NA	rs7521953	0.63	0.63	0.613	0.604034	0.5457	0.8502	0.5778	0.503	0.5654	0.53	0.88	0.6	0.52	0.5635	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.076132	NA	NA	0.516163	0.524739	NA	0.522	NA	5.0413036
1148	16	10205430	10205430	A	G	intronic	GRIN2A	NA	NA	NA	ncRNA_exonic	ENSG00000261647	NA	NA	NA	Score=571;Name=lod=278	NA	16p13.2	NA	NA	NA	NA	rs7190342	0.33	0.33	0.343	0.354233	0.2922	0.4712	0.268	0.3336	0.3865	0.28	0.47	0.25	0.32	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011633	NA	NA	NA	NA	NA	0.232	NA	5.0411333
1148	6	31379794	31379794	C	T	exonic	MICA	NA	synonymous SNV	MICA:NM_000247:exon4:c.C684T:p.S228S,MICA:NM_001177519:exon4:c.C684T:p.S228S	exonic	ENSG00000204520	NA	synonymous SNV	ENSG00000204520:ENST00000421350:exon3:c.C357T:p.S119S,ENSG00000204520:ENST00000449934:exon4:c.C684T:p.S228S	NA	NA	6p21.33	NA	NA	NA	NA	rs1051797	0.31	0.31	0.189	0.364018	0.3141	0.2996	0.4063	0.4773	0.2986	0.26	0.23	0.41	0.39	0.3116	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.000558	NA	NA	NA	NA	NA	NA	NA	5.0409666
1148	14	100792126	100792126	C	T	exonic	SLC25A47	NA	synonymous SNV	SLC25A47:NM_207117:exon2:c.C30T:p.G10G	exonic	ENSG00000140107	NA	synonymous SNV	ENSG00000140107:ENST00000361529:exon2:c.C30T:p.G10G	NA	NA	14q32.2	NA	NA	NA	NA	rs35097172	0.14	0.14	0.129	0.132388	0.2087	0.1181	0.1153	0.0734	0.1605	0.21	0.12	0.12	0.07	0.1879	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.150338	NA	NA	0.229302	0.101906	NA	0.196	NA	5.0407646
1148	1	170959088	170959088	C	T	exonic	MROH9	NA	synonymous SNV	MROH9:NM_001163629:exon11:c.C972T:p.C324C,MROH9:NM_025063:exon11:c.C972T:p.C324C	exonic	ENSG00000117501	NA	synonymous SNV	ENSG00000117501:ENST00000367758:exon11:c.C972T:p.C324C,ENSG00000117501:ENST00000367759:exon11:c.C972T:p.C324C	NA	NA	1q24.3	NA	NA	NA	NA	rs28634500	0.22	0.22	0.232	0.221446	0.2227	0.001	0.1902	0.4614	0.1452	0.22	NA	0.21	0.48	0.1968	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.304322	NA	NA	0.206614	0.401133	NA	0.319	NA	5.0405526
1148	10	98127809	98127809	A	C	UTR3	TLL2	NM_012465:c.*36T>G	NA	NA	UTR3	ENSG00000095587	ENST00000357947:c.*36T>G	NA	NA	Score=272;Name=lod=17	NA	10q24.1	NA	NA	NA	NA	rs41291624	0.07	0.07	0.072	0.0623003	0.1044	0.0099	0.0476	0.0893	0.047	0.11	0.02	0.06	0.08	0.0848	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.154127	NA	NA	0.103837	0.09941	NA	0.058	NA	5.0402964
1148	15	22482858	22482858	A	G	intergenic	OR4N3P,REREP3	dist=68463;dist=63707	NA	NA	ncRNA_exonic	ENSG00000270356	NA	NA	NA	Score=446;Name=lod=87	NA	15q11.2	NA	NA	Name=2	NA	rs1807224	NA	NA	0.404	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4693	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.432455	NA	NA	0.490526	0.473622	NA	0.428	NA	5.040174
1148	17	6560595	6560595	C	T	upstream	ALOX15P1	NA	NA	NA	intergenic	ENSG00000264468,ENSG00000141485	dist=1767;dist=27437	NA	NA	NA	NA	17p13.1	NA	Name=CTCF,ELF1_(SC-631),Pol2,TAF1,GABP	Name=21	NA	rs12103597	0.48	0.48	0.517	0.601038	0.4602	0.7054	0.5605	0.6626	0.5838	0.37	0.59	0.48	0.52	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.239498	NA	NA	NA	NA	NA	NA	NA	5.0398
1148	17	6560596	6560596	A	T	upstream	ALOX15P1	NA	NA	NA	intergenic	ENSG00000264468,ENSG00000141485	dist=1768;dist=27436	NA	NA	NA	NA	17p13.1	NA	Name=CTCF,ELF1_(SC-631),Pol2,TAF1,GABP	Name=21	NA	rs12103854	0.48	0.48	0.513	0.601038	0.4602	0.7054	0.5605	0.6626	0.5838	0.37	0.59	0.48	0.54	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.768119	NA	NA	NA	NA	NA	NA	NA	5.0398
1148	17	6560693	6560693	G	A	upstream	ALOX15P1	NA	NA	NA	intergenic	ENSG00000264468,ENSG00000141485	dist=1865;dist=27339	NA	NA	NA	NA	17p13.1	NA	Name=CTCF,ELF1_(SC-631),Pol2,GABP,TAF1	Name=21	NA	rs2309598	0.53	0.53	0.339	0.601438	0.4602	0.7073	0.5605	0.6626	0.5838	0.4	0.63	0.52	0.61	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.117348	NA	NA	NA	NA	NA	NA	NA	5.0398
1148	6	7331682	7331682	G	C	intronic	CAGE1	NA	NA	NA	ncRNA_exonic	ENSG00000219375	NA	NA	NA	Score=724;Name=lod=1164	NA	6p24.3	NA	NA	NA	NA	rs2714313	0.33	0.33	0.352	0.348243	0.2942	0.2331	0.2622	0.5628	0.2935	0.31	0.23	0.26	0.53	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.865178	1.865178	NA	NA	NA	NA	0.304	NA	5.0391333
1148	1	152328411	152328411	A	G	exonic	FLG2	NA	synonymous SNV	FLG2:NM_001014342:exon3:c.T1851C:p.S617S	exonic	ENSG00000143520	NA	synonymous SNV	ENSG00000143520:ENST00000388718:exon3:c.T1851C:p.S617S	NA	NA	1q21.3	NA	NA	NA	NA	rs6679449	0.36	0.36	0.377	0.483227	0.169	0.5079	0.4553	0.7988	0.3742	0.13	0.44	0.33	0.61	0.2941	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.114006	NA	NA	0.16465	0.659101	ID=COSM1127384;OCCURENCE=1(prostate)	0.435	NA	5.0389166
1148	14	107130971	107130971	C	T	intergenic	LINC00221,NONE	dist=179442;dist=NONE	NA	NA	downstream	ENSG00000211972	NA	NA	NA	NA	NA	14q32.33	NA	Name=YY1_(C-20),Znf143_(16618-1-AP),CTCF,Rad21,YY1,TCF12	Name=9	NA	rs1964192	0.47	0.47	0.502	0.513778	0.4612	0.4444	0.4856	0.562	0.5941	0.41	0.4	0.49	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.732901	NA	NA	NA	NA	NA	0.362	NA	5.0388
1148	15	89421405	89421405	G	A	exonic	HAPLN3	NA	synonymous SNV	HAPLN3:NM_178232:exon5:c.C879T:p.I293I	exonic	ENSG00000140511	NA	synonymous SNV	ENSG00000140511:ENST00000359595:exon5:c.C879T:p.I293I,ENSG00000140511:ENST00000562889:exon6:c.C1065T:p.I355I	NA	NA	15q26.1	NA	NA	NA	NA	rs7182726	0.17	0.17	0.172	0.174521	0.2167	0.1101	0.1974	0.1778	0.1769	0.2	0.09	0.22	0.18	0.1912	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.62346	NA	NA	0.220516	0.200909	ID=COSM1129067;OCCURENCE=1(prostate)	0.261	NA	5.0382506
1148	9	19376258	19376258	G	C	UTR3	RPS6	NM_001010:c.*33C>G	NA	NA	UTR3	ENSG00000137154	ENST00000380394:c.*33C>G	NA	NA	NA	NA	9p22.1	NA	Name=CTCF_(SC-5916)	NA	NA	rs67906804	0.14	0.14	0.138	0.16234	0.0944	0.0179	0.1153	0.3366	0.1789	0.08	0.02	0.1	0.38	0.1161	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.302927	NA	NA	0.084671	0.263504	NA	0.217	NA	5.0381624
1148	7	134814411	134814411	T	C	intronic	AGBL3	NA	NA	NA	ncRNA_exonic	ENSG00000223500	NA	NA	NA	Score=346;Name=lod=34	NA	7q33	NA	NA	NA	NA	rs4728353	0.33	0.33	0.285	0.272963	0.2952	0.5813	0.3617	0.053	0.1667	0.29	0.58	0.37	0.06	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.309041	1.309041	NA	NA	NA	NA	0.21	NA	5.0381333
1148	3	195965509	195965509	T	C	UTR3	PCYT1A	NM_005017:c.*50A>G	NA	NA	UTR3	ENSG00000161217	ENST00000292823:c.*50A>G,ENST00000431016:c.*50A>G	NA	NA	Score=478;Name=lod=117	NA	3q29	NA	NA	NA	NA	rs3184886	0.06	0.06	0.063	0.0579073	0.1074	NA	0.0663	0.0794	0.0317	0.1	NA	0.06	0.07	0.0827	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.855224	2.855224	NA	0.106047	0.092374	NA	0.065	NA	5.0371864
1148	11	9981165	9981165	A	G	intronic	SBF2	NA	NA	NA	ncRNA_exonic	ENSG00000254765	NA	NA	NA	Score=788;Name=lod=2116	NA	11p15.4	NA	NA	NA	NA	rs4909917	0.26	0.26	0.25	0.249002	0.2962	0.1895	0.3473	0.1717	0.2965	0.3	0.2	0.35	0.2	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.649171	NA	NA	NA	NA	NA	0.275	NA	5.0371333
1148	12	122618131	122618131	A	G	exonic	MLXIP	NA	synonymous SNV	MLXIP:NM_014938:exon9:c.A1329G:p.P443P	exonic	ENSG00000175727	NA	synonymous SNV	ENSG00000175727:ENST00000538698:exon1:c.A150G:p.P50P,ENSG00000175727:ENST00000377037:exon2:c.A99G:p.P33P,ENSG00000175727:ENST00000319080:exon9:c.A1329G:p.P443P	NA	NA	12q24.31	NA	NA	NA	NA	rs36045144	0.24	0.24	0.215	0.22524	0.2306	0.2738	0.1974	0.2042	0.2178	0.24	0.3	0.22	0.18	0.2245	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.538574	NA	NA	0.175054	0.183659	NA	0.217	NA	5.0365126
1148	7	5567596	5567596	C	T	intronic	ACTB	NA	NA	NA	intronic	ENSG00000075624	NA	NA	NA	NA	NA	7p22.1	NA	Name=Pol2(b),JunD,Pol2-4H8,HEY1,ZBTB33,Pol2,BCLAF1_(M33-P5B11)	Name=132	NA	rs852424	0.29	0.29	0.274	0.292133	0.3062	0.1806	0.3156	0.3737	0.2658	0.3	0.17	0.35	0.37	0.3247	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.383448	NA	NA	0.332674	0.353382	NA	0.203	NA	5.036426
1148	17	63739352	63739352	A	G	intronic	CEP112	NA	NA	NA	intronic	ENSG00000154240	NA	NA	NA	Score=614;Name=lod=418	NA	17q24.1	Score=841;Name=V$FOXO4_02	NA	NA	NA	rs12948946	0.18	0.18	0.151	0.142372	0.3469	0.0774	0.1628	0.0477	0.1125	0.34	0.07	0.19	0.05	0.263	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.794721	1.794721	NA	0.353837	0.088516	NA	0.283	NA	5.036263
1148	6	31133870	31133870	G	A	UTR5	POU5F1	NM_203289:c.-151C>T	NA	NA	UTR5	ENSG00000204531	ENST00000513407:c.-454C>T,ENST00000471529:c.-454C>T	NA	NA	NA	NA	6p21.33	NA	NA	Name=3	NA	rs72856736	0.09	0.09	0.068	0.08127	0.1123	0.0347	0.1383	0.0666	0.0767	0.12	0.04	0.15	0.06	0.0982	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.73368	NA	NA	0.086628	0.058783	ID=COSN167726;OCCURENCE=1(large_intestine)	0.051	NA	5.0362054
1148	19	54848032	54848032	C	T	intronic	LILRA4	NA	NA	NA	ncRNA_intronic	ENSG00000248166	NA	NA	NA	NA	NA	19q13.42	NA	NA	Name=3	NA	rs62132194	0.11	0.11	0.107	0.096246	0.1412	NA	0.111	0.1384	0.0818	0.14	NA	0.14	0.15	0.156	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.930545	NA	NA	NA	NA	NA	0.101	NA	5.0361333
1148	1	152283975	152283975	A	G	exonic	FLG	NA	synonymous SNV	FLG:NM_002016:exon3:c.T3387C:p.S1129S	exonic	ENSG00000143631	NA	synonymous SNV	ENSG00000143631:ENST00000368799:exon3:c.T3387C:p.S1129S	NA	NA	1q21.3	NA	NA	NA	NA	rs66831674	0.36	0.36	0.338	0.463059	0.172	0.6558	0.4524	0.5204	0.4939	0.16	0.58	0.34	0.45	0.2943	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.042268	NA	NA	0.164806	0.456423	NA	0.268	NA	5.0355606
1149	4	68810246	68810246	G	A	exonic	TMPRSS11A	NA	synonymous SNV	TMPRSS11A:NM_001114387:exon3:c.C243T:p.T81T,TMPRSS11A:NM_182606:exon3:c.C243T:p.T81T	exonic	ENSG00000187054	NA	synonymous SNV	ENSG00000187054:ENST00000513536:exon2:c.C183T:p.T61T,ENSG00000187054:ENST00000334830:exon3:c.C243T:p.T81T,ENSG00000187054:ENST00000396188:exon3:c.C243T:p.T81T,ENSG00000187054:ENST00000508048:exon3:c.C240T:p.T80T	NA	NA	4q13.2	NA	NA	NA	NA	rs1370840	0.31	0.31	0.3	0.327077	0.2157	0.1885	0.3761	0.5537	0.2434	0.21	0.19	0.32	0.57	0.2475	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.081402	NA	NA	0.168721	0.494326	ID=COSM149682;OCCURENCE=1(stomach)	0.304	NA	5.0347456
1149	11	118890085	118890085	C	T	intronic	TRAPPC4	NA	NA	NA	UTR3	ENSG00000196655	ENST00000525079:c.*54C>T	NA	NA	NA	NA	11q23.3	NA	NA	Name=21	NA	rs4938619	0.08	0.08	0.067	0.0764776	0.1322	0.0159	0.1369	0.0484	0.0767	0.13	0.01	0.14	0.07	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.421436	NA	NA	NA	NA	NA	0.138	NA	5.0344667
1149	1	26653319	26653319	G	A	intronic	AIM1L	NA	NA	NA	ncRNA_exonic	ENSG00000225854	NA	NA	NA	Score=644;Name=lod=553	NA	1p36.11	NA	NA	NA	NA	rs11588739	0.23	0.23	0.203	0.187101	0.3002	0.2649	0.2305	0.0582	0.1339	0.31	0.25	0.23	0.07	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.263335	NA	NA	NA	NA	NA	0.225	NA	5.0331333
1149	2	110942150	110942150	G	A	intronic	NPHP1	NA	NA	NA	ncRNA_exonic	ENSG00000233370	NA	NA	NA	Score=803;Name=lod=2446	NA	2q13	NA	NA	NA	NA	rs881302	0.31	0.31	0.281	0.310703	0.3002	0.4544	0.3473	0.0968	0.4366	0.29	0.42	0.4	0.14	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.028084	NA	NA	NA	NA	NA	0.232	NA	5.0331333
1149	7	149509807	149509807	C	T	intronic	SSPO	NA	NA	NA	ncRNA_intronic	ENSG00000197558	NA	NA	NA	NA	NA	7q36.1	Score=828;Name=V$ARP1_01	NA	NA	NA	rs740110	0.4	0.4	0.398	0.433706	0.3002	0.4296	0.3775	0.6089	0.3783	0.29	0.44	0.37	0.57	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.19522	NA	NA	NA	NA	NA	0.413	NA	5.0331333
1149	16	10205824	10205824	C	G	intronic	GRIN2A	NA	NA	NA	ncRNA_exonic	ENSG00000261647	NA	NA	NA	Score=809;Name=lod=2586	NA	16p13.2	NA	NA	NA	NA	rs11641504	0.36	0.36	0.36	0.373602	0.3002	0.4583	0.2882	0.3888	0.4018	0.29	0.45	0.29	0.39	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.194963	NA	NA	NA	NA	NA	0.268	NA	5.0331333
1149	7	149559273	149559273	C	T	exonic	ZNF862	NA	synonymous SNV	ZNF862:NM_001099220:exon7:c.C3024T:p.L1008L	exonic	ENSG00000106479	NA	synonymous SNV	ENSG00000106479:ENST00000223210:exon7:c.C3024T:p.L1008L	Score=381;Name=lod=47	NA	7q36.1	NA	NA	NA	NA	rs2074700	0.42	0.42	0.414	0.371206	0.5676	0.3264	0.4625	0.2368	0.3323	0.56	0.35	0.48	0.23	0.49	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.309189	NA	NA	0.576585	0.290191	NA	0.457	NA	5.0324816
1149	19	58117223	58117223	T	A	exonic	ZNF530	NA	nonsynonymous SNV	ZNF530:NM_020880:exon3:c.T330A:p.H110Q	exonic	ENSG00000183647	NA	nonsynonymous SNV	ENSG00000183647:ENST00000332854:exon3:c.T330A:p.H110Q,ENSG00000183647:ENST00000600619:exon3:c.T330A:p.H110Q	NA	NA	19q13.43	NA	NA	NA	NA	rs2360543	0.76	0.76	0.741	0.746605	0.7932	0.6825	0.6527	0.8729	0.6605	0.77	0.62	0.73	0.91	0.736	0.91	1	T	0.0	B	0.0	B	.	.	1.000	P	-1.835	N	3.65	T	-1.018	T	0.000	T	0.015	-1.98	0.007	-0.789	-0.852	-0.591	2.213	-1.979703	NA	1	0.77186	0.85202	NA	0.79	NA	5.0322734
1149	1	76210289	76210289	C	T	intronic	ACADM	NA	NA	NA	ncRNA_exonic	ENSG00000181227	NA	NA	NA	Score=663;Name=lod=657	NA	1p31.1	NA	NA	NA	NA	rs11161510	0.19	0.19	0.176	0.17512	0.3012	0.0238	0.2522	0.1377	0.1973	0.28	0.02	0.28	0.17	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.601919	1.601919	NA	NA	NA	NA	0.217	NA	5.0321333
1149	2	133542014	133542014	T	C	exonic	NCKAP5	NA	synonymous SNV	NCKAP5:NM_207363:exon14:c.A2370G:p.A790A	exonic	ENSG00000176771	NA	synonymous SNV	ENSG00000176771:ENST00000317721:exon12:c.A2370G:p.A790A,ENSG00000176771:ENST00000409261:exon14:c.A2370G:p.A790A	NA	NA	2q21.2	Score=742;Name=V$ROAZ_01	NA	NA	NA	rs12616282	0.7	0.7	0.711	0.708466	0.507	0.8681	0.67	0.8328	0.6104	0.5	0.89	0.64	0.83	0.6003	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.560702	NA	NA	0.527542	0.797929	NA	0.746	NA	5.0318246
1149	2	110942496	110942496	G	A	intronic	NPHP1	NA	NA	NA	ncRNA_exonic	ENSG00000233370	NA	NA	NA	Score=803;Name=lod=2446	NA	2q13	NA	NA	NA	NA	rs906815	0.36	0.36	0.346	0.36881	0.3022	0.5506	0.3516	0.1846	0.5112	0.29	0.54	0.4	0.22	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.462828	NA	NA	NA	NA	NA	0.275	NA	5.0311333
1149	2	215145765	215145765	G	A	intronic	SPAG16	NA	NA	NA	ncRNA_exonic	ENSG00000213917	NA	NA	NA	Score=780;Name=lod=1970	NA	2q34	NA	NA	NA	NA	rs10490503	0.39	0.39	0.372	0.374201	0.3022	0.506	0.4236	0.3767	0.274	0.3	0.52	0.4	0.37	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.119326	NA	NA	NA	NA	NA	0.297	NA	5.0311333
1149	15	36905834	36905834	T	A	intronic	C15orf41	NA	NA	NA	ncRNA_exonic	ENSG00000261635	NA	NA	NA	Score=758;Name=lod=1605	NA	15q14	NA	NA	NA	NA	rs12911214	0.25	0.25	0.228	0.261182	0.3022	0.2986	0.2248	0.1392	0.3712	0.32	0.27	0.21	0.16	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.252538	NA	NA	NA	NA	NA	0.29	NA	5.0311333
1149	1	152280864	152280864	A	G	exonic	FLG	NA	synonymous SNV	FLG:NM_002016:exon3:c.T6498C:p.S2166S	exonic	ENSG00000143631	NA	synonymous SNV	ENSG00000143631:ENST00000368799:exon3:c.T6498C:p.S2166S	NA	NA	1q21.3	NA	NA	NA	NA	rs2184954	0.35	0.35	0.39	0.463658	0.172	0.6577	0.4524	0.5204	0.4949	0.15	0.57	0.33	0.4	0.2946	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.268508	NA	NA	0.168993	0.466636	NA	0.181	NA	5.0310736
1149	17	38609207	38609207	T	C	intronic	IGFBP4	NA	NA	NA	intronic	ENSG00000141753	NA	NA	NA	Score=272;Name=lod=17	NA	17q21.2	Score=828;Name=V$ATF_01	NA	NA	NA	rs1009728	0.35	0.35	0.314	0.34365	0.3231	0.5317	0.3084	0.1815	0.4151	0.32	0.51	0.34	0.22	0.3309	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.965802	1.965802	NA	0.315349	0.231049	NA	0.239	NA	5.030651
1149	5	178349136	178349136	C	T	intronic	ZFP2	NA	NA	NA	ncRNA_exonic	ENSG00000253869	NA	NA	NA	Score=431;Name=lod=75	NA	5q35.3	NA	NA	NA	NA	rs60943644	0.29	0.29	0.269	0.305112	0.3032	0.3542	0.2853	0.1959	0.4182	0.3	0.37	0.28	0.2	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.409264	NA	NA	NA	NA	NA	0.232	NA	5.0301333
1149	19	5273571	5273571	T	G	exonic	PTPRS	NA	synonymous SNV	PTPRS:NM_002850:exon4:c.A261C:p.A87A,PTPRS:NM_130853:exon4:c.A261C:p.A87A,PTPRS:NM_130854:exon4:c.A261C:p.A87A,PTPRS:NM_130855:exon4:c.A261C:p.A87A	exonic	ENSG00000105426	NA	synonymous SNV	ENSG00000105426:ENST00000587303:exon3:c.A261C:p.A87A,ENSG00000105426:ENST00000588012:exon3:c.A261C:p.A87A,ENSG00000105426:ENST00000590509:exon3:c.A261C:p.A87A,ENSG00000105426:ENST00000592099:exon3:c.A261C:p.A87A,ENSG00000105426:ENST00000262963:exon4:c.A261C:p.A87A,ENSG00000105426:ENST00000348075:exon4:c.A261C:p.A87A,ENSG00000105426:ENST00000353284:exon4:c.A261C:p.A87A,ENSG00000105426:ENST00000357368:exon4:c.A261C:p.A87A,ENSG00000105426:ENST00000372412:exon4:c.A261C:p.A87A,ENSG00000105426:ENST00000591760:exon4:c.A261C:p.A87A	NA	NA	19p13.3	NA	NA	NA	NA	rs1141371	0.17	0.17	0.179	0.163538	0.2266	0.002	0.1527	0.2943	0.0961	0.22	0.0035	0.16	0.29	0.1869	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.321972	NA	NA	0.223721	0.265093	NA	0.188	NA	5.0294456
1149	17	6652996	6652996	A	G	intergenic	SLC13A5,XAF1	dist=36256;dist=6160	NA	NA	upstream;downstream	ENSG00000244283;ENSG00000262990	NA	NA	NA	NA	NA	17p13.1	NA	Name=CTCF_(SC-5916),CTCF,Rad21	Name=31	NA	rs1567347	0.6	0.6	0.616	0.631989	0.4712	0.7351	0.4971	0.8086	0.5481	0.46	0.74	0.48	0.77	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.066643	NA	NA	NA	NA	NA	0.543	NA	5.0288
1149	14	23312923	23312923	T	C	exonic	MMP14	NA	synonymous SNV	MMP14:NM_004995:exon6:c.T855C:p.G285G	exonic	ENSG00000157227	NA	synonymous SNV	ENSG00000157227:ENST00000311852:exon6:c.T855C:p.G285G	NA	NA	14q11.2	NA	NA	NA	NA	rs2236307	0.28	0.28	0.272	0.271565	0.2018	0.3562	0.1671	0.3313	0.2495	0.19	0.37	0.18	0.37	0.225	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.859187	NA	NA	0.211163	0.304812	NA	0.261	NA	5.0287036
1149	22	24056537	24056537	G	A	ncRNA_intronic	GUSBP11	NA	NA	NA	ncRNA_intronic	ENSG00000228315	NA	NA	NA	Score=522;Name=lod=176	NA	22q11.23	NA	NA	NA	NA	rs2070444	0.46	0.46	0.427	0.440096	0.6382	0.3194	0.5994	0.2322	0.5286	0.64	0.33	0.6	0.24	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.225942	NA	NA	NA	NA	NA	0.471	NA	5.0284666
1149	19	42373679	42373679	C	T	intronic	RPS19	NA	NA	NA	intronic	ENSG00000105372	NA	NA	NA	NA	NA	19q13.2	NA	Name=Pol2	Name=8	NA	rs2075750	0.56	0.56	0.597	0.558506	0.4622	0.5089	0.5447	0.7663	0.4376	0.48	0.55	0.49	0.74	0.5094	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.020954	NA	NA	NA	NA	NA	0.58	NA	5.0284
1149	1	18023877	18023877	G	A	UTR3	ARHGEF10L	NM_018125:c.*2G>A,NM_001011722:c.*2G>A	NA	NA	UTR3	ENSG00000074964	ENST00000452522:c.*2G>A,ENST00000361221:c.*2G>A,ENST00000375415:c.*2G>A,ENST00000375408:c.*2G>A,ENST00000167825:c.*2G>A	NA	NA	NA	NA	1p36.13	NA	Name=CTCF	NA	NA	rs11589634	0.1	0.1	0.097	0.0954473	0.1153	0.0615	0.049	0.1082	0.1258	0.12	0.07	0.07	0.11	0.0982	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.273677	NA	NA	0.091598	0.103687	NA	0.174	NA	5.0282354
1149	3	185226492	185226492	C	T	UTR3	LIPH	NM_139248:c.*86G>A	NA	NA	UTR3	ENSG00000163898	ENST00000296252:c.*86G>A,ENST00000424591:c.*86G>A,ENST00000435679:c.*153G>A	NA	NA	Score=265;Name=lod=16	NA	3q27.2	NA	NA	NA	NA	rs55854644	0.14	0.14	0.126	0.115016	0.3052	0.005	0.1427	0.0151	0.1483	0.32	0.01	0.15	0.03	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.362459	1.362459	NA	NA	NA	NA	0.188	NA	5.0281334
1149	1	76209754	76209754	G	A	intronic	ACADM	NA	NA	NA	ncRNA_exonic	ENSG00000181227	NA	NA	NA	Score=781;Name=lod=1981	NA	1p31.1	NA	NA	NA	NA	rs12123977	0.2	0.2	0.184	0.183307	0.3052	0.0228	0.3026	0.1362	0.2025	0.28	0.02	0.32	0.17	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.640533	2.640533	NA	NA	NA	NA	0.217	NA	5.0281333
1149	12	104659095	104659095	C	T	intronic	TXNRD1	NA	NA	NA	ncRNA_exonic	ENSG00000213442	NA	NA	NA	Score=295;Name=lod=21	NA	12q23.3	NA	NA	NA	NA	rs35651749	0.14	0.14	0.103	0.114417	0.3052	0.0079	0.1427	0.0393	0.1094	0.29	0.0017	0.17	0.04	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.164143	NA	NA	NA	NA	NA	0.13	NA	5.0281333
1149	3	12537955	12537955	T	A	intronic	TSEN2	NA	NA	NA	intronic	ENSG00000154743	NA	NA	NA	NA	NA	3p25.2	NA	Name=FOXA1_(C-20),TCF4	Name=2	NA	rs299651	0.42	0.42	0.434	0.366414	0.4791	0.1091	0.3703	0.6324	0.1534	0.49	0.11	0.43	0.64	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.225912	NA	NA	0.493086	0.608382	NA	0.464	NA	5.027814
1149	3	9757086	9757086	C	G	intronic	CPNE9	NA	NA	NA	intronic	ENSG00000144550	NA	NA	NA	NA	NA	3p25.3	NA	Name=c-Myc,ZNF263	Name=13	NA	rs697820	0.19	0.19	0.173	0.145767	0.3777	0.0595	0.2017	0.0144	0.1339	0.38	0.06	0.21	0.02	0.2571	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.444276	1.444276	NA	0.337618	0.068451	NA	0.138	NA	5.027582
1149	7	66019190	66019190	G	A	ncRNA_exonic	LOC493754	NA	NA	NA	ncRNA_intronic	ENSG00000232559	NA	NA	NA	Score=635;Name=lod=508	NA	7q11.21	NA	NA	NA	NA	rs13536	0.66	0.66	0.694	0.623403	0.6392	0.5466	0.6398	0.7595	0.4908	0.64	0.56	0.66	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.163052	NA	NA	NA	NA	NA	0.609	NA	5.0274666
1149	7	66019631	66019631	A	G	ncRNA_exonic	LOC493754	NA	NA	NA	ncRNA_exonic	ENSG00000232559	NA	NA	NA	Score=718;Name=lod=1099	NA	7q11.21	NA	NA	NA	NA	rs801208	0.66	0.66	0.651	0.623203	0.6392	0.5456	0.6398	0.7595	0.4908	0.64	0.56	0.66	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.472708	NA	NA	NA	NA	NA	0.609	NA	5.0274666
1149	7	66021966	66021966	C	G	ncRNA_intronic	LOC493754	NA	NA	NA	ncRNA_exonic	ENSG00000177418,ENSG00000232491	NA	NA	NA	Score=492;Name=lod=133	NA	7q11.21	NA	NA	NA	NA	rs801206	0.66	0.66	0.702	0.623203	0.6392	0.5456	0.6398	0.7595	0.4908	0.64	0.56	0.66	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.327782	NA	NA	NA	NA	NA	0.5	NA	5.0274666
1149	7	142099484	142099484	G	C	intergenic	LOC730441,MTRNR2L6	dist=127416;dist=274647	NA	NA	exonic	ENSG00000229200	NA	synonymous SNV	ENSG00000229200:ENST00000390359:exon2:c.C318G:p.S106S	NA	NA	7q34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4732	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.494272	NA	NA	NA	NA	NA	NA	NA	5.0268
1149	10	90438207	90438207	A	G	exonic	LIPF	NA	synonymous SNV	LIPF:NM_001198828:exon10:c.A867G:p.Q289Q,LIPF:NM_004190:exon10:c.A966G:p.Q322Q,LIPF:NM_001198829:exon11:c.A996G:p.Q332Q,LIPF:NM_001198830:exon11:c.A897G:p.Q299Q	exonic	ENSG00000182333	NA	synonymous SNV	ENSG00000182333:ENST00000238983:exon10:c.A966G:p.Q322Q,ENSG00000182333:ENST00000355843:exon11:c.A867G:p.Q289Q,ENSG00000182333:ENST00000394375:exon11:c.A996G:p.Q332Q	NA	NA	10q23.31	NA	NA	NA	NA	rs1228187	0.23	0.23	0.221	0.228435	0.2107	0.3274	0.3069	0.1248	0.229	0.21	0.34	0.27	0.1	0.2227	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.073436	NA	NA	0.206628	0.140263	NA	0.123	NA	5.0266386
1149	6	118320595	118320595	C	A	intronic	SLC35F1	NA	NA	NA	ncRNA_exonic	ENSG00000230202	NA	NA	NA	Score=325;Name=lod=28	NA	6q22.2	NA	NA	NA	NA	rs6928714	0.28	0.28	0.246	0.308506	0.3072	0.1845	0.3732	0.3313	0.3609	0.3	0.16	0.37	0.32	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.954976	2.954976	NA	NA	NA	NA	0.275	NA	5.0261333
1149	15	91428290	91428290	C	T	exonic	FES	NA	synonymous SNV	FES:NM_001143783:exon1:c.C15T:p.S5S,FES:NM_001143784:exon1:c.C15T:p.S5S,FES:NM_001143785:exon2:c.C15T:p.S5S,FES:NM_002005:exon2:c.C15T:p.S5S	exonic	ENSG00000182511	NA	synonymous SNV	ENSG00000182511:ENST00000394300:exon1:c.C15T:p.S5S,ENSG00000182511:ENST00000444422:exon1:c.C15T:p.S5S,ENSG00000182511:ENST00000450438:exon1:c.C15T:p.S5S,ENSG00000182511:ENST00000328850:exon2:c.C15T:p.S5S,ENSG00000182511:ENST00000394302:exon2:c.C15T:p.S5S,ENSG00000182511:ENST00000414248:exon2:c.C15T:p.S5S,ENSG00000182511:ENST00000416779:exon2:c.C15T:p.S5S,ENSG00000182511:ENST00000443697:exon2:c.C15T:p.S5S,ENSG00000182511:ENST00000452243:exon2:c.C15T:p.S5S,ENSG00000182511:ENST00000464684:exon2:c.C15T:p.S5S,ENSG00000182511:ENST00000470152:exon2:c.C15T:p.S5S,ENSG00000182511:ENST00000559355:exon2:c.C15T:p.S5S	NA	NA	15q26.1	Score=768;Name=V$MEF2_01	NA	NA	NA	rs11539637	0.6	0.6	0.568	0.58746	0.5258	0.8065	0.7277	0.382	0.6033	0.52	0.83	0.71	0.37	0.5849	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.278459	NA	NA	0.529898	0.422884	NA	0.464	NA	5.0260686
1149	1	152284854	152284854	A	G	exonic	FLG	NA	synonymous SNV	FLG:NM_002016:exon3:c.T2508C:p.D836D	exonic	ENSG00000143631	NA	synonymous SNV	ENSG00000143631:ENST00000368799:exon3:c.T2508C:p.D836D	NA	NA	1q21.3	NA	NA	NA	NA	rs3120653	0.4	0.4	0.35	0.473243	0.173	0.6558	0.4553	0.5567	0.4939	0.17	0.58	0.36	0.54	0.2978	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.029537	NA	NA	0.17	0.501135	NA	0.109	NA	5.0258666
1149	6	32190620	32190620	T	C	intronic	NOTCH4	NA	NA	NA	intronic	ENSG00000204301	NA	NA	NA	NA	Name=Circulating myeloperoxidase levels (serum)	6p21.32	NA	Name=PU.1	NA	NA	rs3134931	0.42	0.42	0.405	0.454273	0.3151	0.5952	0.379	0.4849	0.4642	0.31	0.56	0.36	0.45	0.3557	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.316169	NA	NA	0.30407	0.46049	NA	0.326	NA	5.02513
1150	3	195507858	195507858	G	T	exonic	MUC4	NA	synonymous SNV	MUC4:NM_018406:exon2:c.C10593A:p.T3531T	exonic	ENSG00000145113	NA	synonymous SNV	ENSG00000145113:ENST00000462323:exon2:c.C10593A:p.T3531T,ENSG00000145113:ENST00000463781:exon2:c.C10593A:p.T3531T,ENSG00000145113:ENST00000466475:exon2:c.C10593A:p.T3531T,ENSG00000145113:ENST00000470451:exon2:c.C10593A:p.T3531T,ENSG00000145113:ENST00000475231:exon2:c.C10593A:p.T3531T,ENSG00000145113:ENST00000477086:exon2:c.C10593A:p.T3531T,ENSG00000145113:ENST00000477756:exon2:c.C10593A:p.T3531T,ENSG00000145113:ENST00000478156:exon2:c.C10593A:p.T3531T,ENSG00000145113:ENST00000479406:exon2:c.C10593A:p.T3531T,ENSG00000145113:ENST00000480843:exon2:c.C10593A:p.T3531T	NA	NA	3q29	NA	NA	NA	NA	rs74957513	NA	NA	0.34	0.548722	0.5308	0.6736	0.4683	0.5696	0.4673	NA	NA	NA	NA	0.1111	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.671984	NA	NA	NA	NA	NA	NA	NA	5.0247666
1150	10	42831643	42831643	C	T	ncRNA_exonic	LOC441666	NA	NA	NA	downstream	ENSG00000215146	NA	NA	NA	NA	NA	10q11.21	NA	Name=ZNF274,SETDB1,KAP1	NA	NA	rs12264479	0.18	0.18	0.167	0.207867	0.1421	0.2202	0.1196	0.3313	0.1585	0.13	0.2	0.14	0.28	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.817553	NA	NA	NA	NA	NA	0.138	NA	5.0245666
1150	2	215146151	215146151	G	T	intronic	SPAG16	NA	NA	NA	ncRNA_exonic	ENSG00000213917	NA	NA	NA	Score=780;Name=lod=1970	NA	2q34	NA	NA	NA	NA	rs4673816	0.39	0.39	0.381	0.375799	0.3091	0.505	0.4265	0.3767	0.274	0.3	0.52	0.41	0.37	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.265164	NA	NA	NA	NA	NA	0.297	NA	5.0242333
1150	20	52037947	52037947	C	A	intronic	TSHZ2	NA	NA	NA	ncRNA_exonic	ENSG00000224530	NA	NA	NA	Score=592;Name=lod=339	NA	20q13.2	NA	NA	NA	NA	rs6063942	0.26	0.26	0.241	0.253794	0.3091	0.1399	0.2795	0.3018	0.2311	0.31	0.12	0.32	0.29	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.283577	NA	NA	NA	NA	NA	0.152	NA	5.0242333
1150	3	158289035	158289035	T	A	UTR5	MLF1	NM_001195432:c.-11589T>A,NM_001195434:c.-21216T>A,NM_001195433:c.-21216T>A,NM_022443:c.-55T>A,NM_001130157:c.-21216T>A,NM_001130156:c.-21216T>A	NA	NA	UTR5	ENSG00000178053	ENST00000355893:c.-55T>A,ENST00000491767:c.-25643T>A,ENST00000484955:c.-21216T>A,ENST00000359117:c.-21216T>A,ENST00000498592:c.-86T>A,ENST00000471745:c.-21216T>A,ENST00000495452:c.-55T>A,ENST00000477042:c.-21216T>A,ENST00000469452:c.-21216T>A,ENST00000482628:c.-21216T>A	NA	NA	NA	NA	3q25.32	NA	Name=HEY1,CCNT2,c-Myc,Max,SETDB1,NF-YB,USF-1,IRF1,TBP,ETS1,E2F6_(H-50),GATA-1,TAF1,JunD,HMGN3,USF2,E2F4,RFX5_(N-494),SP1,NRSF,Pol2,eGFP-JunD,E2F6,GATA-2,Pol2-4H8,USF1_(SC-8983),c-Fos,HA-E2F1	NA	NA	rs3817373	0.17	0.17	0.163	0.196086	0.164	0.0565	0.1888	0.3041	0.2321	0.17	0.05	0.16	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.362649	2.362649	NA	0.145151	0.276734	NA	0.254	NA	5.0241824
1150	12	102158763	102158763	T	C	exonic	GNPTAB	NA	synonymous SNV	GNPTAB:NM_024312:exon13:c.A1932G:p.T644T	exonic	ENSG00000111670	NA	synonymous SNV	ENSG00000111670:ENST00000299314:exon13:c.A1932G:p.T644T	NA	NA	12q23.2	NA	NA	NA	NA	rs10778148	0.65	0.65	0.656	0.651358	0.5318	0.8978	0.5346	0.6241	0.6401	0.53	0.91	0.56	0.61	0.5885	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.17628	NA	NA	0.522326	0.640944	ID=COSM1127589;OCCURENCE=1(prostate)	0.486	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000082189.1;CLNDSDB=.;CLNDSDBID=.	5.0240406
1150	4	155312411	155312411	G	A	exonic	DCHS2	NA	synonymous SNV	DCHS2:NM_017639:exon1:c.C39T:p.D13D	exonic	ENSG00000197410	NA	synonymous SNV	ENSG00000197410:ENST00000357232:exon1:c.C39T:p.D13D	NA	NA	4q31.3	NA	NA	NA	NA	rs62331900	0.28	0.28	0.285	0.321486	0.1948	0.3403	0.1311	0.4607	0.3793	0.19	0.32	0.17	0.46	0.2701	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.462165	NA	NA	0.177832	0.38851	NA	0.246	NA	5.0239346
1150	2	165477836	165477836	G	A	UTR5	GRB14	NM_004490:c.-17C>T	NA	NA	UTR5	ENSG00000115290	ENST00000263915:c.-17C>T,ENST00000446413:c.-36C>T	NA	NA	NA	NA	2q24.3	NA	Name=Pol2,E2F1,Pol2-4H8,HA-E2F1	NA	NA	rs10200142	0.09	0.09	0.084	0.0830671	0.1103	0.0268	0.0793	0.118	0.0685	0.1	0.04	0.09	0.13	0.1175	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.88283	NA	NA	0.08175	0.08649	NA	NA	NA	5.0237834
1150	9	19376255	19376255	A	C	UTR3	RPS6	NM_001010:c.*36T>G	NA	NA	UTR3	ENSG00000137154	ENST00000380394:c.*36T>G	NA	NA	NA	NA	9p22.1	NA	Name=CTCF_(SC-5916)	NA	NA	rs67710536	0.17	0.17	0.186	0.21885	0.0944	0.0179	0.1254	0.5454	0.1789	0.08	0.02	0.11	0.53	0.1315	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.570143	NA	NA	0.084225	0.433243	NA	0.268	NA	5.0232084
1150	7	27088296	27088296	A	G	intergenic	SKAP2,HOXA1	dist=183955;dist=44318	NA	NA	downstream	ENSG00000213786	NA	NA	NA	NA	NA	7p15.2	NA	Name=CTCF,Rad21,CTCF_(SC-5916)	Name=3	NA	rs2712232	0.46	0.46	0.45	0.46226	0.4771	0.4335	0.3963	0.5598	0.3916	0.47	0.41	0.38	0.55	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.250177	NA	NA	NA	NA	NA	0.478	NA	5.0229
1150	20	52037978	52037978	A	G	intronic	TSHZ2	NA	NA	NA	ncRNA_exonic	ENSG00000224530	NA	NA	NA	Score=592;Name=lod=339	NA	20q13.2	NA	NA	NA	NA	rs6063943	0.19	0.19	0.152	0.175919	0.3111	0.1379	0.2565	0.0121	0.2403	0.31	0.12	0.29	0.02	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.056227	NA	NA	NA	NA	NA	0.08	NA	5.0222333
1150	22	44386281	44386281	C	T	exonic	SAMM50	NA	synonymous SNV	SAMM50:NM_015380:exon14:c.C1359T:p.G453G	exonic	ENSG00000100347	NA	synonymous SNV	ENSG00000100347:ENST00000396202:exon13:c.C729T:p.G243G,ENSG00000100347:ENST00000350028:exon14:c.C1359T:p.G453G	NA	NA	22q13.31	NA	NA	NA	NA	rs7587	0.23	0.23	0.23	0.222843	0.2068	0.3621	0.1657	0.1604	0.2209	0.22	0.34	0.18	0.16	0.2162	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.80713	NA	NA	0.221628	0.17113	NA	0.188	NA	5.0220386
1150	6	29550416	29550416	G	A	downstream	SNORD32B	NA	NA	NA	ncRNA_exonic	ENSG00000231301	NA	NA	NA	Score=612;Name=lod=410	NA	6p22.1	NA	NA	NA	NA	rs1233392	0.17	0.17	0.181	0.151757	0.1451	0.2401	0.1859	0.1271	0.0767	0.14	0.24	0.18	0.12	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.267586	NA	NA	NA	NA	NA	0.167	NA	5.0215666
1150	1	214656466	214656466	C	G	intronic	PTPN14	NA	NA	NA	ncRNA_exonic	ENSG00000213036	NA	NA	NA	Score=715;Name=lod=1073	NA	1q41	NA	NA	NA	NA	rs61745824	NA	NA	0.28	0.351837	0.3121	0.3095	0.3689	0.3994	0.3599	NA	NA	NA	NA	NA	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.757667	1.757667	NA	NA	NA	NA	0.08	NA	5.0212333
1150	12	1805467	1805467	C	G	intronic	ADIPOR2	NA	NA	NA	ncRNA_exonic	ENSG00000271500	NA	NA	NA	NA	NA	12p13.33	NA	NA	Name=26	NA	rs11061927	0.3	0.3	0.26	0.297125	0.3121	0.3353	0.4899	0.1445	0.3119	0.29	0.32	0.46	0.17	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.435411	NA	NA	NA	NA	NA	0.196	NA	5.0212333
1150	13	27151170	27151170	A	G	intronic	WASF3	NA	NA	NA	ncRNA_exonic	ENSG00000234031	NA	NA	NA	Score=798;Name=lod=2331	NA	13q12.13	NA	NA	NA	NA	rs9319306	0.43	0.43	0.445	0.417332	0.3121	0.5754	0.4553	0.4486	0.2935	0.3	0.59	0.45	0.43	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.671083	NA	NA	NA	NA	NA	0.304	NA	5.0212333
1150	6	31125402	31125402	C	G	UTR5	CCHCR1	NM_001105563:c.-25G>C,NM_001105564:c.-25G>C	NA	NA	UTR5	ENSG00000204536	ENST00000396268:c.-25G>C,ENST00000426967:c.-25G>C,ENST00000488920:c.-25G>C,ENST00000506831:c.-587G>C	NA	NA	NA	NA	6p21.33	NA	Name=ZBTB7A_(SC-34508)	NA	NA	rs72856720	0.09	0.09	0.072	0.08127	0.1123	0.0347	0.1383	0.0666	0.0767	0.12	0.04	0.15	0.06	0.1159	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.369464	1.369464	NA	0.084321	0.055287	NA	0.051	NA	5.0208124
1150	11	3982537	3982537	T	G	intronic	STIM1	NA	NA	NA	ncRNA_exonic	ENSG00000255232	NA	NA	NA	Score=374;Name=lod=44	NA	11p15.4	NA	NA	NA	NA	rs12223176	0.24	0.24	0.214	0.257188	0.3131	0.3214	0.2723	0.0166	0.4479	0.32	0.31	0.24	0.02	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.254621	NA	NA	NA	NA	NA	0.232	NA	5.0202333
1150	15	31083568	31083568	A	G	intergenic	LOC100288637,HERC2P10	dist=18359;dist=26671	NA	NA	upstream	ENSG00000103832	NA	NA	NA	NA	NA	15q13.2	NA	Name=TAF1,TCF4	Name=20	NA	rs811768	0.45	0.45	0.424	0.475639	0.4801	0.1647	0.4539	0.7912	0.3804	0.47	0.13	0.43	0.78	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.354794	NA	NA	NA	NA	NA	0.348	NA	5.0199
1150	11	33097652	33097652	G	A	upstream	LINC00294	NA	NA	NA	ncRNA_exonic	ENSG00000213713	NA	NA	NA	Score=645;Name=lod=559	NA	11p13	NA	NA	NA	NA	rs2273550	0.17	0.17	0.166	0.196086	0.1471	0.3383	0.0908	0.1051	0.2975	0.16	0.3	0.1	0.1	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.055864	NA	NA	NA	NA	NA	0.152	NA	5.0195666
1150	4	156136027	156136027	C	T	exonic	NPY2R	NA	synonymous SNV	NPY2R:NM_000910:exon2:c.C936T:p.I312I	exonic	ENSG00000185149	NA	synonymous SNV	ENSG00000185149:ENST00000329476:exon2:c.C936T:p.I312I,ENSG00000185149:ENST00000506608:exon2:c.C936T:p.I312I	Score=395;Name=lod=54	NA	4q32.1	NA	NA	NA	NA	rs2880415	0.66	0.66	0.687	0.656949	0.5447	0.7609	0.4914	0.823	0.5583	0.56	0.77	0.51	0.8	0.5734	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.558554	NA	NA	0.529302	0.768271	NA	0.667	NA	5.0192646
1150	9	18950787	18950787	G	A	exonic	FAM154A	NA	nonsynonymous SNV	FAM154A:NM_153707:exon2:c.C187T:p.P63S	exonic	ENSG00000155875	NA	nonsynonymous SNV	ENSG00000155875:ENST00000380530:exon2:c.C187T:p.P63S,ENSG00000155875:ENST00000380534:exon2:c.C187T:p.P63S	NA	NA	9p22.1	NA	NA	NA	NA	rs6475273	0.74	0.74	0.753	0.760184	0.7734	0.5685	0.7003	0.9107	0.7832	0.76	0.57	0.73	0.9	0.7581	0.9	0.89	T	0.0	B	0.001	B	0.934	N	1.000	P	-0.665	N	1.64	T	-0.983	T	0.000	T	0.029	-2.097	0.006	-0.118	0.006	-0.172	1.393	-2.096667	NA	0.8	0.782674	0.889696	ID=COSM1685399;OCCURENCE=1(skin)	0.688	NA	5.0191594
1150	16	90160948	90160948	G	A	intergenic	PRDM7,NONE	dist=18610;dist=NONE	NA	NA	exonic	ENSG00000261812	NA	unknown	UNKNOWN	Score=585;Name=lod=317	NA	16q24.3	NA	NA	NA	NA	rs8049119	0.09	0.09	0.119	NA	NA	NA	NA	NA	NA	0.12	NA	0.1	0.16	0.148	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.333041	1.333041	0	NA	NA	NA	0.007	NA	5.0186667
1150	5	140554606	140554606	T	C	exonic	PCDHB7	NA	synonymous SNV	PCDHB7:NM_018940:exon1:c.T2190C:p.F730F	exonic	ENSG00000113212	NA	synonymous SNV	ENSG00000113212:ENST00000231137:exon1:c.T2190C:p.F730F	NA	NA	5q31.3	NA	NA	NA	NA	rs11741863	0.26	0.26	0.19	0.269968	0.2296	0.5278	0.3055	0.0484	0.32	0.22	0.52	0.24	0.03	0.2554	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.592257	NA	NA	0.163605	0.049705	ID=COSM1434242;OCCURENCE=1(large_intestine)	0.297	NA	5.0180616
1150	7	43959493	43959493	G	A	intronic	URGCP	NA	NA	NA	ncRNA_exonic	ENSG00000237972	NA	NA	NA	Score=843;Name=lod=3552	NA	7p13	NA	NA	NA	NA	rs11561791	0.39	0.39	0.39	0.459265	0.3171	0.504	0.366	0.4803	0.5971	0.32	0.45	0.39	0.43	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.450476	NA	NA	NA	NA	NA	0.507	NA	5.0162333
1150	12	129429026	129429026	C	T	intronic	GLT1D1	NA	NA	NA	ncRNA_exonic	ENSG00000255838	NA	NA	NA	Score=563;Name=lod=259	NA	12q24.33	NA	NA	NA	NA	rs2398436	0.2	0.2	0.16	0.150958	0.3171	0.0774	0.3372	0.0083	0.1166	0.31	0.1	0.35	0.01	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.268106	NA	NA	NA	NA	NA	0.167	NA	5.0162333
1150	19	55033234	55033234	G	A	intergenic	LAIR2,KIR3DX1	dist=11334;dist=10675	NA	NA	downstream	ENSG00000213016	NA	NA	NA	NA	NA	19q13.42	NA	Name=NFKB,EBF,EBF1_(C-8),BATF	Name=2	NA	rs55813809	0.38	0.38	0.363	0.355831	0.4841	0.4544	0.304	0.1528	0.4335	0.47	0.45	0.36	0.15	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.393772	NA	NA	NA	NA	NA	0.377	NA	5.0159
1150	6	111695887	111695887	G	A	exonic	REV3L	NA	nonsynonymous SNV	REV3L:NM_002912:exon13:c.C3671T:p.T1224I	exonic	ENSG00000009413	NA	nonsynonymous SNV	ENSG00000009413:ENST00000368802:exon13:c.C3671T:p.T1224I,ENSG00000009413:ENST00000358835:exon14:c.C3671T:p.T1224I,ENSG00000009413:ENST00000368805:exon14:c.C3671T:p.T1224I,ENSG00000009413:ENST00000435970:exon15:c.C3437T:p.T1146I	NA	NA	6q21	NA	NA	NA	NA	rs462779	0.59	0.59	0.584	0.586462	0.7883	0.4534	0.7435	0.3654	0.7035	0.78	0.47	0.72	0.35	0.7165	0.81	1	T	0.0	B	0.0	B	0.872	N	1.000	P	-0.145	N	5.02	T	-0.991	T	0.001	T	0.026	-0.982	0.288	1.45	-0.150	0.615	10.545	-0.981858	NA	1	0.812791	0.440282	NA	0.572	NA	5.0157424
1150	11	71277273	71277273	T	G	UTR3	KRTAP5-10	NM_001012710:c.*31T>G	NA	NA	UTR3	ENSG00000204572	ENST00000398531:c.*31T>G	NA	NA	NA	NA	11q13.4	NA	NA	Name=6	NA	rs66487667	0.13	0.13	0.123	0.125399	0.1183	0.0903	0.1196	0.2095	0.0593	0.11	0.09	0.11	0.21	0.1065	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.425923	NA	NA	0.092942	0.178409	NA	0.094	NA	5.0155914
1150	2	132201663	132201663	T	C	ncRNA_exonic	LOC401010	NA	NA	NA	ncRNA_exonic	ENSG00000217950	NA	NA	NA	Score=346;Name=lod=34	NA	2q21.1	NA	NA	NA	NA	rs1317139	0.53	0.53	0.517	0.55012	0.2674	0.7629	0.6066	0.7216	0.3497	0.25	0.73	0.54	0.72	0.3838	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.175279	NA	NA	NA	NA	NA	0.5	NA	5.0154666
1150	11	6503127	6503127	G	A	intronic	TIMM10B	NA	NA	NA	intronic	ENSG00000132286,ENSG00000265264	NA	NA	NA	NA	NA	11p15.4	NA	Name=Pol2-4H8	Name=6	NA	rs2303492	0.25	0.25	0.241	0.226038	0.3529	0.13	0.3573	0.1384	0.2198	0.34	0.15	0.37	0.14	0.3003	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.307098	NA	NA	0.331704	0.168333	NA	0.261	NA	5.015096
1151	20	34025756	34025756	A	G	UTR5	GDF5	NM_000557:c.-48T>C	NA	NA	UTR5	ENSG00000125965	ENST00000374372:c.-48T>C,ENST00000374369:c.-48T>C	NA	NA	Score=832;Name=lod=3206	Name=Height	20q11.22	NA	NA	NA	NA	rs143384	0.49	0.49	0.508	0.561102	0.4115	0.2887	0.3429	0.9728	0.5941	0.41	0.24	0.39	0.96	0.4744	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.512248	1.512248	NA	0.432665	0.875284	NA	0.551	NA	5.0147684
1151	1	205320469	205320469	G	A	intronic	KLHDC8A	NA	NA	NA	ncRNA_exonic	ENSG00000235363	NA	NA	NA	Score=654;Name=lod=608	NA	1q32.1	NA	NA	NA	NA	rs4951205	0.35	0.35	0.307	0.329273	0.3191	0.4722	0.4265	0.2148	0.2781	0.33	0.48	0.36	0.23	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.689997	1.689997	NA	NA	NA	ID=COSN163408;OCCURENCE=1(NS)	0.319	NA	5.0142333
1151	17	37992281	37992281	C	T	intronic	IKZF3	NA	NA	NA	ncRNA_exonic	ENSG00000264663	NA	NA	NA	Score=669;Name=lod=695	NA	17q12	NA	NA	NA	NA	rs62066988	0.22	0.22	0.233	0.188299	0.3191	0.2083	0.2435	0.0424	0.1912	0.31	0.24	0.25	0.05	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.534271	NA	NA	NA	NA	NA	0.275	NA	5.0142333
1151	1	26608828	26608828	G	A	exonic	UBXN11	NA	nonsynonymous SNV	UBXN11:NM_001077262:exon11:c.C1165T:p.P389S,UBXN11:NM_145345:exon15:c.C1426T:p.P476S,UBXN11:NM_183008:exon16:c.C1525T:p.P509S	exonic	ENSG00000158062	NA	nonsynonymous SNV	ENSG00000158062:ENST00000314675:exon11:c.C1165T:p.P389S,ENSG00000158062:ENST00000374223:exon12:c.C796T:p.P266S,ENSG00000158062:ENST00000357089:exon14:c.C1426T:p.P476S,ENSG00000158062:ENST00000374217:exon15:c.C1426T:p.P476S,ENSG00000158062:ENST00000374221:exon16:c.C1525T:p.P509S,ENSG00000158062:ENST00000374222:exon16:c.C1525T:p.P509S	NA	NA	1p36.11	NA	NA	NA	NA	rs1134584	0.37	0.37	0.473	0.393371	0.6292	0.3095	0.402	0.3555	0.2822	0.49	0.26	0.35	0.34	0.0218	0.67	0.2	T	.	.	.	.	0.244	U	1.000	P	0.695	N	2.0	T	-1.019	T	0.000	T	0.101	-0.841	0.571	.	0.064	-0.877	.	-0.841059	NA	0	0.668352	0.475	NA	0.232	NA	5.0139814
1151	16	87678165	87678165	G	A	exonic	JPH3	NA	synonymous SNV	JPH3:NM_020655:exon2:c.G684A:p.S228S	exonic	ENSG00000154118	NA	synonymous SNV	ENSG00000154118:ENST00000284262:exon2:c.G684A:p.S228S	NA	NA	16q24.2	NA	NA	NA	NA	rs3751725	0.22	0.22	0.181	0.185903	0.2028	0.3204	0.2291	0.0454	0.1892	0.23	0.35	0.2	0.04	0.2208	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.808874	NA	NA	0.229419	0.072566	NA	0.159	NA	5.0136476
1151	7	139727135	139727135	G	A	exonic	PARP12	NA	synonymous SNV	PARP12:NM_022750:exon10:c.C1569T:p.F523F	exonic	ENSG00000059378	NA	synonymous SNV	ENSG00000059378:ENST00000263549:exon10:c.C1569T:p.F523F	NA	NA	7q34	NA	NA	NA	NA	rs2286196	0.32	0.32	0.301	0.302117	0.1998	0.5258	0.3631	0.2799	0.1636	0.19	0.52	0.33	0.28	0.2523	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.348602	2.348602	NA	0.201279	0.279392	NA	0.254	NA	5.0132876
1151	19	53912521	53912521	G	A	UTR3	ZNF765	NM_001040185:c.*141G>A	NA	NA	UTR3	ENSG00000196417	ENST00000396408:c.*141G>A	NA	NA	Score=329;Name=lod=29	NA	19q13.42	NA	NA	NA	NA	rs73059151	0.21	0.21	0.185	0.227636	0.3201	0.1042	0.3775	0.0522	0.3906	0.33	0.09	0.35	0.07	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.25022	NA	NA	NA	NA	NA	0.188	NA	5.0132334
1151	6	84102550	84102550	A	C	intronic	ME1	NA	NA	NA	ncRNA_exonic	ENSG00000219951	NA	NA	NA	Score=770;Name=lod=1800	NA	6q14.2	NA	NA	NA	NA	rs12191369	0.22	0.22	0.183	0.188498	0.3201	0.1101	0.3703	0.0953	0.1309	0.31	0.1	0.33	0.11	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.576457	NA	NA	NA	NA	NA	0.217	NA	5.0132333
1151	4	121958691	121958691	T	C	exonic	NDNF	NA	synonymous SNV	NDNF:NM_024574:exon4:c.A435G:p.L145L	exonic	ENSG00000173376	NA	synonymous SNV	ENSG00000173376:ENST00000379692:exon4:c.A435G:p.L145L,ENSG00000173376:ENST00000515757:exon4:c.A435G:p.L145L	NA	NA	4q27	NA	NA	NA	NA	rs3733559	0.2	0.2	0.178	0.22504	0.2038	0.2351	0.3357	0.0998	0.3272	0.22	0.22	0.3	0.08	0.2421	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.105449	NA	NA	0.208123	0.11422	NA	0.167	NA	5.0126436
1151	11	71515610	71515610	A	G	ncRNA_intronic	ALG1L9P	NA	NA	NA	ncRNA_exonic	ENSG00000254978	NA	NA	NA	Score=505;Name=lod=150	NA	11q13.4	NA	NA	NA	NA	rs10898623	0.5	0.5	0.374	0.494209	0.6541	0.4573	0.4366	0.3124	0.6544	0.65	0.46	0.48	0.35	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.390639	NA	NA	NA	NA	NA	0.5	NA	5.0125666
1151	17	2966308	2966308	C	T	exonic	OR1D5	NA	synonymous SNV	OR1D5:NM_014566:exon1:c.G594A:p.A198A	exonic	ENSG00000262628	NA	synonymous SNV	ENSG00000262628:ENST00000575751:exon1:c.G594A:p.A198A	NA	NA	17p13.3	NA	NA	NA	NA	rs2855605	NA	NA	0.243	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3103	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.47065	NA	NA	0.344077	0.362534	NA	NA	NA	5.0122896
1151	19	51767205	51767205	C	T	UTR5	SIGLECL1	NM_173635:c.-122C>T	NA	NA	ncRNA_UTR5	ENSG00000179213	NA	NA	NA	NA	NA	19q13.41	NA	Name=PU.1	NA	NA	rs6509523	0.58	0.58	0.553	0.576478	0.4881	0.5079	0.7075	0.7965	0.3476	0.5	0.47	0.67	0.78	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.978417	NA	NA	NA	NA	NA	0.616	NA	5.0119
1151	13	99853225	99853225	C	G	UTR5	UBAC2	NM_177967:c.-441C>G	NA	NA	UTR5	ENSG00000134882	ENST00000376440:c.-441C>G,ENST00000457666:c.-165C>G	NA	NA	NA	NA	13q32.3	NA	Name=Pol2,NRSF,EBF1_(C-8),Pol2-4H8	NA	NA	rs7332516	0.08	0.08	0.045	0.140575	0.0755	0.0972	0.1383	0.0908	0.3211	0.08	0.08	0.1	0.09	0.1592	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.12158	3.12158	NA	0.086809	0.074194	NA	0.043	NA	5.0118244
1151	14	107170055	107170055	G	A	intergenic	LINC00221,NONE	dist=218526;dist=NONE	NA	NA	exonic	ENSG00000211973	NA	nonsynonymous SNV	ENSG00000211973:ENST00000390633:exon2:c.C227T:p.T76I	NA	NA	14q32.33	NA	NA	Name=5	NA	rs8009570	0.42	0.42	0.382	NA	NA	NA	NA	NA	NA	0.39	0.49	0.45	0.37	0.4369	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.259874	NA	0.27	0.385127	0.320346	NA	0.399	NA	5.0113064
1151	8	33246685	33246685	G	A	exonic	FUT10	NA	synonymous SNV	FUT10:NM_032664:exon4:c.C1008T:p.Y336Y	exonic	ENSG00000172728	NA	synonymous SNV	ENSG00000172728:ENST00000518672:exon3:c.C924T:p.Y308Y,ENSG00000172728:ENST00000327671:exon4:c.C1008T:p.Y336Y,ENSG00000172728:ENST00000524021:exon4:c.C924T:p.Y308Y,ENSG00000172728:ENST00000335589:exon5:c.C822T:p.Y274Y	NA	NA	8p12	NA	NA	NA	NA	rs16880852	0.27	0.27	0.255	0.298722	0.1938	0.4683	0.17	0.1808	0.4826	0.21	0.47	0.17	0.18	0.2586	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.444034	NA	NA	0.20314	0.207898	ID=COSM150483;OCCURENCE=1(stomach)	0.225	NA	5.0111266
1151	18	10526187	10526187	A	G	intronic	NAPG	NA	NA	NA	intronic	ENSG00000134265	NA	NA	NA	NA	NA	18p11.22	NA	Name=TBP,YY1,Pol2-4H8,HA-E2F1,Pol2,YY1_(C-20),TAF1	Name=147	NA	rs2290279	0.38	0.38	0.373	0.346046	0.3509	0.4177	0.3112	0.3608	0.272	0.35	0.45	0.33	0.38	0.323	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.328452	1.328452	NA	0.315045	0.342105	NA	0.312	NA	5.011055
1151	3	148863151	148863151	A	G	exonic	HPS3	NA	synonymous SNV	HPS3:NM_032383:exon5:c.A981G:p.T327T	exonic	ENSG00000163755	NA	synonymous SNV	ENSG00000163755:ENST00000460120:exon4:c.A486G:p.T162T,ENSG00000163755:ENST00000296051:exon5:c.A981G:p.T327T	NA	NA	3q24	NA	NA	NA	NA	rs11718908	0.25	0.25	0.247	0.277556	0.1998	0.1706	0.2363	0.4546	0.2577	0.2	0.15	0.24	0.45	0.2409	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.86492	NA	NA	0.215	0.42828	NA	0.297	NA	5.0109666
1151	9	140001978	140001978	C	A	intronic	MAN1B1	NA	NA	NA	intronic	ENSG00000177239	NA	NA	NA	NA	NA	9q34.3	NA	Name=HNF4G_(SC-6558),HNF4A_(H-171)	NA	NA	rs12115325	0.18	0.18	0.175	0.178315	0.3449	0.006	0.2233	0.062	0.3098	0.35	0.0017	0.25	0.09	0.2838	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.006639	NA	NA	0.360349	0.11961	NA	0.283	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117581.2;CLNDSDB=.;CLNDSDBID=.	5.010951
1151	1	10459779	10459779	G	A	intronic	PGD	NA	NA	NA	intronic	ENSG00000142657	NA	NA	NA	NA	NA	1p36.22	NA	Name=HA-E2F1,Pol2	Name=105	NA	rs3737155	0.36	0.36	0.342	0.334465	0.338	0.3403	0.3732	0.3434	0.2853	0.34	0.36	0.4	0.36	0.3233	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.250586	1.250586	NA	0.327791	0.32887	NA	0.304	NA	5.010909
1151	20	44594228	44594228	G	A	intronic	ZNF335	NA	NA	NA	intronic	ENSG00000198026	NA	NA	NA	NA	NA	20q13.12	NA	Name=EBF1_(C-8),NFKB,TCF12	Name=6	NA	rs3746513	0.23	0.23	0.2	0.234824	0.3549	0.0923	0.219	0.171	0.3558	0.35	0.09	0.26	0.18	0.2906	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.861127	NA	NA	0.343648	0.18537	NA	0.225	NA	5.010852
1151	15	63449543	63449543	A	C	intronic	RPS27L	NA	NA	NA	intronic	ENSG00000185088	NA	NA	NA	NA	NA	15q22.2	NA	Name=USF-1,THAP1_(SC-98174),GATA2_(CG2-96),TBP,NFKB,HEY1,c-Myc,CCNT2,ZBTB7A_(SC-34508),PAX5-N19,PAX5-C20,Egr-1,NANOG_(SC-33759),Ini1,Pol2-4H8,ZNF263,KAP1,Sin3Ak-20,HA-E2F1,Pol2(b),ELK4,FOXA1_(C-20),GTF2F1_(RAP-74),FOXA2_(SC-6554),FOXA1_(SC-101058),ELF1_(SC-631),Max,Oct-2,NRSF,Mxi1_(bHLH),Pol2,E2F6,MEF2A,BCLAF1_(M33-P5B11),TAF7_(SQ-8),ETS1,TAF1,HMGN3,POU2F2	Name=148	NA	rs7170846	0.3	0.3	0.263	0.269968	0.4901	0.2242	0.2695	0.146	0.2587	0.48	0.2	0.3	0.14	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.293316	NA	NA	0.499371	0.21315	NA	0.268	NA	5.010529
1151	4	40337908	40337908	T	C	exonic	CHRNA9	NA	synonymous SNV	CHRNA9:NM_017581:exon2:c.T129C:p.S43S	exonic	ENSG00000174343	NA	synonymous SNV	ENSG00000174343:ENST00000310169:exon2:c.T129C:p.S43S	Score=614;Name=lod=418	NA	4p14	NA	NA	NA	NA	rs10022491	0.6	0.6	0.604	0.644369	0.5338	0.4008	0.6427	0.9334	0.6196	0.53	0.39	0.66	0.92	0.5767	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.993192	NA	NA	0.545814	0.866773	NA	0.638	NA	5.0103526
1151	14	65543102	65543102	C	T	UTR3	MAX	NM_145113:c.*364G>A,NM_145112:c.*92G>A,NM_002382:c.*92G>A	NA	NA	UTR3	ENSG00000125952	ENST00000358402:c.*92G>A,ENST00000394606:c.*348G>A,ENST00000555932:c.*67G>A,ENST00000284165:c.*1419G>A,ENST00000358664:c.*92G>A,ENST00000555419:c.*92G>A	NA	NA	Score=412;Name=lod=63	NA	14q23.3	NA	NA	NA	NA	rs45604339	0.22	0.22	0.211	0.203075	0.3231	0.1329	0.1686	0.1278	0.2781	0.32	0.16	0.19	0.14	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.326213	NA	NA	NA	NA	NA	0.203	NA	5.0102334
1151	4	40788210	40788210	T	C	intronic	NSUN7	NA	NA	NA	ncRNA_exonic	ENSG00000248780	NA	NA	NA	Score=755;Name=lod=1557	NA	4p14	NA	NA	NA	NA	rs2437314	0.25	0.25	0.241	0.215455	0.3231	0.1409	0.1902	0.3026	0.0818	0.31	0.16	0.22	0.3	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.058314	3.058314	NA	NA	NA	ID=COSN167187;OCCURENCE=1(large_intestine)	0.268	NA	5.0102333
1151	10	99160046	99160046	C	T	intronic	RRP12	NA	NA	NA	intronic	ENSG00000052749	NA	NA	NA	NA	NA	10q24.1	NA	Name=Sin3Ak-20,c-Jun,JunD,FOSL1_(SC-183),Pol2,eGFP-JunD,TAF1,GABP	Name=137	NA	rs2297668	0.37	0.37	0.386	0.400759	0.336	0.3125	0.3444	0.5386	0.4121	0.33	0.28	0.33	0.56	0.338	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.26871	NA	NA	0.316512	0.497049	NA	0.297	NA	5.009488
1151	1	76209935	76209935	T	C	intronic	ACADM	NA	NA	NA	ncRNA_exonic	ENSG00000181227	NA	NA	NA	Score=443;Name=lod=84	NA	1p31.1	NA	NA	NA	NA	rs1146580	0.32	0.32	0.298	0.31849	0.3241	0.0228	0.3617	0.5991	0.2076	0.3	0.02	0.38	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.146338	NA	NA	NA	NA	NA	0.333	NA	5.0092333
1151	13	41195411	41195411	G	A	intronic	FOXO1	NA	NA	NA	ncRNA_exonic	ENSG00000229456	NA	NA	NA	Score=609;Name=lod=399	NA	13q14.11	NA	NA	NA	NA	rs12583418	0.5	0.5	0.488	0.520367	0.3241	0.7371	0.4063	0.59	0.4857	0.32	0.71	0.38	0.61	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.012772	NA	NA	NA	NA	NA	0.442	NA	5.0092333
1151	19	45451620	45451620	T	A	ncRNA_intronic	APOC4-APOC2	NA	NA	NA	UTR5	ENSG00000234906	ENST00000585786:c.-116T>A	NA	NA	NA	NA	19q13.32	NA	Name=Egr-1	NA	NA	rs5120	0.65	0.65	0.614	0.669928	0.4911	0.6558	0.7349	0.8033	0.6421	0.51	0.67	0.69	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.556197	NA	NA	NA	NA	NA	0.667	NA	5.0089
1151	2	18768850	18768850	A	G	exonic	NT5C1B,NT5C1B-RDH14	NA	synonymous SNV	NT5C1B:NM_001002006:exon2:c.T39C:p.P13P,NT5C1B:NM_001199086:exon2:c.T39C:p.P13P,NT5C1B:NM_001199087:exon2:c.T39C:p.P13P,NT5C1B:NM_001199088:exon2:c.T39C:p.P13P,NT5C1B-RDH14:NM_001199103:exon2:c.T39C:p.P13P,NT5C1B-RDH14:NM_001199104:exon2:c.T39C:p.P13P,NT5C1B:NM_033253:exon2:c.T39C:p.P13P	exonic	ENSG00000185013,ENSG00000250741	NA	synonymous SNV	ENSG00000185013:ENST00000304081:exon2:c.T39C:p.P13P,ENSG00000185013:ENST00000359846:exon2:c.T39C:p.P13P,ENSG00000185013:ENST00000406971:exon2:c.T39C:p.P13P,ENSG00000185013:ENST00000416783:exon2:c.T39C:p.P13P,ENSG00000250741:ENST00000444297:exon2:c.T39C:p.P13P,ENSG00000250741:ENST00000532967:exon2:c.T39C:p.P13P,ENSG00000185013:ENST00000600945:exon2:c.T39C:p.P13P	NA	NA	2p24.2	NA	NA	NA	NA	rs16985306	0.3	0.3	0.325	0.31849	0.1998	0.1151	0.3199	0.6649	0.181	0.21	0.11	0.3	0.65	0.2499	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.213006	NA	NA	0.208372	0.587835	NA	0.297	NA	5.0085946
1151	8	75516199	75516199	G	C	ncRNA_intronic	FLJ39080	NA	NA	NA	ncRNA_exonic	ENSG00000253341	NA	NA	NA	Score=722;Name=lod=1147	NA	8q21.11	NA	NA	NA	NA	rs3802201	0.71	0.71	0.751	0.705671	0.6581	0.6587	0.6037	0.9327	0.5685	0.66	0.67	0.62	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.565972	1.565972	NA	NA	NA	NA	0.754	NA	5.0085666
1151	4	8616096	8616096	T	C	exonic	CPZ	NA	synonymous SNV	CPZ:NM_003652:exon8:c.T1341C:p.D447D,CPZ:NM_001014447:exon9:c.T1374C:p.D458D,CPZ:NM_001014448:exon9:c.T963C:p.D321D	exonic	ENSG00000109625	NA	synonymous SNV	ENSG00000109625:ENST00000429646:exon7:c.T198C:p.D66D,ENSG00000109625:ENST00000315782:exon8:c.T1341C:p.D447D,ENSG00000109625:ENST00000360986:exon9:c.T1374C:p.D458D,ENSG00000109625:ENST00000382480:exon9:c.T963C:p.D321D	Score=563;Name=lod=258	NA	4p16.1	NA	NA	NA	NA	rs1131140	0.62	0.62	0.566	0.616813	0.5517	0.87	0.6671	0.3782	0.7096	0.55	0.9	0.64	0.4	0.5753	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.469528	NA	NA	0.531279	0.431003	NA	0.551	NA	5.0083876
1151	16	57111232	57111232	C	T	exonic	NLRC5	NA	synonymous SNV	NLRC5:NM_032206:exon40:c.C4860T:p.D1620D	exonic	ENSG00000140853	NA	synonymous SNV	ENSG00000140853:ENST00000539144:exon38:c.C4773T:p.D1591D,ENSG00000140853:ENST00000308149:exon40:c.C4773T:p.D1591D,ENSG00000140853:ENST00000262510:exon41:c.C4860T:p.D1620D	NA	NA	16q13	NA	NA	NA	NA	rs11864231	0.18	0.18	0.156	0.172524	0.2326	0.1468	0.1816	0.1036	0.2239	0.24	0.16	0.21	0.08	0.2126	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.406577	NA	NA	0.213372	0.134213	NA	0.138	NA	5.0080946
1151	21	11029679	11029679	C	G	UTR3	BAGE2,BAGE3	NM_182482:c.*977G>C;NM_182481:c.*977G>C	NA	NA	ncRNA_exonic	ENSG00000187172	NA	NA	NA	Score=699;Name=lod=922	NA	21p11.1	NA	NA	NA	NA	rs10446163	NA	NA	0.34	0.497604	0.492	0.498	0.4986	0.5	0.499	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.270421	NA	NA	NA	NA	NA	NA	NA	5.008
1151	19	46281745	46281745	A	G	intronic	DMPK	NA	NA	NA	intronic	ENSG00000104936	NA	NA	NA	NA	NA	19q13.32	Score=923;Name=V$AREB6_01	NA	NA	NA	rs1799894	0.6	0.6	0.579	NA	NA	NA	NA	NA	NA	0.47	0.68	0.64	0.68	0.5351	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.322863	NA	NA	0.457093	0.652519	NA	0.536	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116882.1;CLNDSDB=.;CLNDSDBID=.	5.007807
1151	1	17250836	17250836	A	G	exonic	CROCC	NA	synonymous SNV	CROCC:NM_014675:exon3:c.A213G:p.T71T	exonic	ENSG00000058453	NA	synonymous SNV	ENSG00000058453:ENST00000375541:exon3:c.A213G:p.T71T	NA	NA	1p36.13	NA	NA	NA	NA	rs57174186	0.36	0.36	0.329	NA	NA	NA	NA	NA	NA	0.34	0.42	0.33	0.35	0.3367	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.222971	NA	NA	0.322284	0.378348	ID=COSM424603;OCCURENCE=3(breast)	0.275	NA	5.0076826
1151	19	20959141	20959141	C	G	intergenic	ZNF626,ZNF85	dist=114739;dist=146918	NA	NA	UTR5	ENSG00000160229	ENST00000360204:c.-16240C>G,ENST00000594534:c.-113C>G	NA	NA	NA	NA	19p12	NA	Name=IRF3,NFKB,HEY1,TBP,GATA-2,Pol2-4H8,Sin3Ak-20,RFX5_(N-494),NF-YB,ELF1_(SC-631),CHD2_(N-1250),GABP,NF-YA,SP2_(SC-643),TAF1,TAF7_(SQ-8),Pol2,SP1	Name=140	NA	rs6511160	0.76	0.76	0.739	0.742212	0.826	0.7014	0.6931	0.68	0.817	0.86	0.73	0.71	0.68	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.413261	NA	NA	NA	NA	NA	0.732	NA	5.0073334
1151	17	76472768	76472768	G	A	exonic	DNAH17	NA	synonymous SNV	DNAH17:NM_173628:exon52:c.C8040T:p.L2680L	exonic	ENSG00000187775	NA	synonymous SNV	ENSG00000187775:ENST00000389840:exon52:c.C7998T:p.L2666L,ENSG00000187775:ENST00000585328:exon52:c.C8025T:p.L2675L	NA	NA	17q25.3	NA	NA	NA	NA	rs7405830	0.35	0.35	0.388	0.375599	0.1909	0.2798	0.2435	0.761	0.2372	0.19	0.27	0.23	0.76	0.275	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.149699	NA	NA	0.193463	0.655422	NA	0.355	NA	5.0073036
1151	7	55266417	55266417	T	C	exonic	EGFR	NA	synonymous SNV	EGFR:NM_005228:exon23:c.T2709C:p.T903T	exonic	ENSG00000146648	NA	synonymous SNV	ENSG00000146648:ENST00000455089:exon22:c.T2574C:p.T858T,ENSG00000146648:ENST00000275493:exon23:c.T2709C:p.T903T,ENSG00000146648:ENST00000454757:exon23:c.T2550C:p.T850T	NA	NA	7p11.2	NA	NA	Name=10	NA	rs1140475	0.91	0.91	0.913	0.916733	0.8907	0.9196	0.8963	0.9281	0.9397	0.89	0.92	0.88	0.94	0.8957	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.608185	NA	NA	0.873256	0.919882	NA	0.942	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000038451.1;CLNDSDB=.;CLNDSDBID=.	5.0070106
1151	2	105705507	105705507	C	T	exonic	MRPS9	NA	synonymous SNV	MRPS9:NM_182640:exon6:c.C555T:p.L185L	exonic	ENSG00000135972	NA	synonymous SNV	ENSG00000135972:ENST00000258455:exon6:c.C555T:p.L185L	NA	NA	2q12.1	NA	NA	NA	NA	rs11538198	0.18	0.18	0.156	0.166933	0.2247	0.1091	0.2781	0.1339	0.1329	0.22	0.13	0.25	0.13	0.1942	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.22253	NA	NA	0.24081	0.14503	NA	0.13	NA	5.0069566
1151	2	105713697	105713697	A	G	exonic	MRPS9	NA	synonymous SNV	MRPS9:NM_182640:exon10:c.A1014G:p.S338S	exonic	ENSG00000135972	NA	synonymous SNV	ENSG00000135972:ENST00000258455:exon10:c.A1014G:p.S338S	NA	NA	2q12.1	NA	NA	NA	NA	rs15567	0.18	0.18	0.153	0.166933	0.2247	0.1091	0.2781	0.1339	0.1329	0.22	0.13	0.25	0.13	0.1943	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.013629	2.013629	NA	0.240814	0.146391	NA	0.13	NA	5.0068526
1151	1	229622162	229622162	A	G	exonic	NUP133	NA	synonymous SNV	NUP133:NM_018230:exon11:c.T1456C:p.L486L	exonic	ENSG00000069248	NA	synonymous SNV	ENSG00000069248:ENST00000261396:exon11:c.T1456C:p.L486L,ENSG00000069248:ENST00000366679:exon11:c.T1456C:p.L486L,ENSG00000069248:ENST00000537506:exon12:c.T1408C:p.L470L	NA	NA	1q42.13	NA	NA	NA	NA	rs1065675	0.28	0.28	0.296	0.303714	0.2097	0.1607	0.3285	0.5809	0.1554	0.21	0.14	0.28	0.57	0.2334	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.92712	NA	NA	0.216744	0.525647	ID=COSM146815;OCCURENCE=1(stomach)	0.283	NA	5.0068226
1151	2	71297982	71297982	C	T	intronic	NAGK	NA	NA	NA	intronic	ENSG00000124357	NA	NA	NA	NA	NA	2p13.3	NA	Name=TBP,PAX5-C20,PAX5-N19,Pol2-4H8,Pol2,TAF1	Name=15	NA	rs2287327	0.41	0.41	0.413	0.436502	0.2992	0.3978	0.353	0.5613	0.5082	0.29	0.42	0.38	0.6	0.369	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.455545	NA	NA	0.326163	0.53064	NA	0.362	NA	5.005637
1151	15	38643574	38643574	T	C	exonic	SPRED1	NA	synonymous SNV	SPRED1:NM_152594:exon7:c.T1044C:p.V348V	exonic	ENSG00000166068	NA	synonymous SNV	ENSG00000166068:ENST00000299084:exon7:c.T1044C:p.V348V	Score=786;Name=lod=2076	NA	15q14	NA	NA	NA	NA	rs3751526	0.82	0.82	0.811	0.799521	0.9006	0.8026	0.8415	0.649	0.8661	0.92	0.8	0.82	0.71	0.8637	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.160681	NA	NA	0.896905	0.685682	NA	0.848	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=Legius_syndrome|not_specified;CLNREVSTAT=single|mult;CLNACC=RCV000034272.2|RCV000041236.2;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet|.;CLNDSDBID=NBK47312:C1969623:611431:ORPHA137605|.	5.0054616
1151	4	156135676	156135676	C	T	exonic	NPY2R	NA	synonymous SNV	NPY2R:NM_000910:exon2:c.C585T:p.I195I	exonic	ENSG00000185149	NA	synonymous SNV	ENSG00000185149:ENST00000329476:exon2:c.C585T:p.I195I,ENSG00000185149:ENST00000506608:exon2:c.C585T:p.I195I	NA	NA	4q32.1	Score=812;Name=V$CART1_01	NA	NA	NA	rs1047214	0.69	0.69	0.728	0.70028	0.5447	0.8115	0.5014	0.9395	0.5634	0.56	0.8	0.51	0.91	0.5864	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.074254	NA	NA	0.530116	0.871766	NA	0.696	NA	5.0054506
1151	17	2211001	2211001	G	A	intronic	SRR	NA	NA	NA	ncRNA_exonic	ENSG00000262333	NA	NA	NA	Score=629;Name=lod=482	NA	17p13.3	NA	NA	NA	NA	rs116875739	0.21	0.21	0.169	0.169529	0.328	0.0784	0.4164	0.0219	0.1247	0.31	0.12	0.41	0.03	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.326505	NA	NA	NA	NA	NA	0.138	NA	5.0053333
1152	19	35719257	35719257	G	A	exonic	FAM187B	NA	synonymous SNV	FAM187B:NM_152481:exon1:c.C327T:p.D109D	exonic	ENSG00000177558	NA	synonymous SNV	ENSG00000177558:ENST00000324675:exon1:c.C327T:p.D109D	Score=340;Name=lod=32	NA	19q13.12	NA	NA	NA	NA	rs11673347	0.32	0.32	0.289	0.284145	0.5944	0.0357	0.3732	0.1346	0.3599	0.59	0.03	0.41	0.16	0.4703	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.63685	NA	NA	0.597093	0.202678	ID=COSM1392803;OCCURENCE=1(large_intestine)	0.319	NA	5.0048736
1152	5	141335284	141335284	G	A	exonic	PCDH12	NA	synonymous SNV	PCDH12:NM_016580:exon1:c.C2133T:p.A711A	exonic	ENSG00000113555	NA	synonymous SNV	ENSG00000113555:ENST00000231484:exon1:c.C2133T:p.A711A	Score=304;Name=lod=23	NA	5q31.3	NA	NA	NA	NA	rs164074	0.6	0.6	0.563	0.597045	0.5497	0.8581	0.6599	0.323	0.7025	0.54	0.86	0.64	0.34	0.5827	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.338531	NA	NA	0.529419	0.370177	NA	0.609	NA	5.0048476
1152	19	4352959	4352959	A	G	exonic	MPND	NA	synonymous SNV	MPND:NM_001159846:exon4:c.A597G:p.A199A,MPND:NM_032868:exon4:c.A597G:p.A199A	exonic	ENSG00000008382	NA	synonymous SNV	ENSG00000008382:ENST00000596722:exon3:c.A693G:p.A231A,ENSG00000008382:ENST00000262966:exon4:c.A597G:p.A199A,ENSG00000008382:ENST00000359935:exon4:c.A597G:p.A199A,ENSG00000008382:ENST00000594716:exon4:c.A597G:p.A199A,ENSG00000008382:ENST00000599840:exon4:c.A597G:p.A199A	NA	NA	19p13.3	NA	Name=CTCF	NA	NA	rs11882587	0.62	0.62	0.577	0.653554	0.5328	0.7718	0.7176	0.6362	0.6339	0.52	0.74	0.65	0.61	0.5842	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.410084	NA	NA	0.544963	0.629536	NA	0.543	NA	5.0047036
1152	5	79596415	79596415	C	T	upstream	LOC644936	NA	NA	NA	ncRNA_intronic	ENSG00000184188	NA	NA	NA	Score=300;Name=lod=22	NA	5q14.1	NA	NA	NA	NA	rs62364042	0.13	0.13	0.104	0.147963	0.162	NA	0.1326	0.2821	0.1155	0.14	NA	0.15	0.26	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.18461	NA	NA	NA	NA	NA	NA	NA	5.0046666
1152	5	79596416	79596416	C	T	upstream	LOC644936	NA	NA	NA	ncRNA_intronic	ENSG00000184188	NA	NA	NA	Score=300;Name=lod=22	NA	5q14.1	NA	NA	NA	NA	rs62364043	0.13	0.13	0.104	0.147963	0.162	NA	0.1326	0.2821	0.1155	0.13	NA	0.14	0.26	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.475506	NA	NA	NA	NA	NA	NA	NA	5.0046666
1152	11	62430659	62430659	T	A	intronic	C11orf48	NA	NA	NA	exonic	ENSG00000162194	NA	nonsynonymous SNV	ENSG00000162194:ENST00000525675:exon3:c.A311T:p.D104V	NA	NA	11q12.3	NA	NA	NA	NA	rs597259	0.74	0.74	0.714	0.766174	0.7296	0.9385	0.7579	0.6445	0.7965	0.73	0.93	0.71	0.58	0.7351	0.93	0	D	.	.	.	.	.	.	1.000	P	.	.	.	.	-1.064	T	0.000	T	0.087	-0.42	2.04	0.774	0.076	-0.048	3.636	-0.420214	NA	NA	0.697488	0.650318	NA	0.652	NA	5.0044787
1152	9	90140230	90140230	A	C	intronic	DAPK1	NA	NA	NA	ncRNA_exonic	ENSG00000219928	NA	NA	NA	Score=643;Name=lod=548	NA	9q21.33	NA	NA	NA	NA	rs7048072	0.25	0.25	0.23	0.234225	0.329	0.0645	0.2061	0.3865	0.1258	0.31	0.06	0.22	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.795637	1.795637	NA	NA	NA	NA	NA	NA	5.0043333
1152	9	90140231	90140231	G	C	intronic	DAPK1	NA	NA	NA	ncRNA_exonic	ENSG00000219928	NA	NA	NA	Score=643;Name=lod=548	NA	9q21.33	NA	NA	NA	NA	rs7048413	0.25	0.25	0.232	0.234225	0.329	0.0645	0.2061	0.3865	0.1258	0.31	0.06	0.22	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.534132	1.534132	NA	NA	NA	NA	NA	NA	5.0043333
1152	2	90260191	90260191	T	C	intergenic	MIR4436A,LOC654342	dist=1148223;dist=1564518	NA	NA	exonic	ENSG00000239819	NA	synonymous SNV	ENSG00000239819:ENST00000471857:exon2:c.T294C:p.S98S	Score=524;Name=lod=180	NA	2p11.2	NA	NA	NA	NA	rs842157	0.19	0.19	0.203	0.239816	0.167	0.0833	0.1455	0.5477	0.1268	0.16	0.07	0.12	0.45	0.1701	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.496797	NA	NA	0.158753	0.5078	NA	0.167	NA	5.004147
1152	11	94533373	94533373	C	T	exonic	AMOTL1	NA	synonymous SNV	AMOTL1:NM_130847:exon3:c.C1017T:p.P339P	exonic	ENSG00000166025	NA	synonymous SNV	ENSG00000166025:ENST00000317829:exon2:c.C867T:p.P289P,ENSG00000166025:ENST00000317837:exon3:c.C1017T:p.P339P,ENSG00000166025:ENST00000433060:exon3:c.C1017T:p.P339P	NA	NA	11q21	NA	NA	NA	NA	rs2303960	0.26	0.26	0.222	0.261382	0.1889	0.4444	0.464	0.0719	0.2597	0.18	0.44	0.41	0.07	0.2667	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.185905	NA	NA	0.207264	0.092323	NA	0.181	NA	5.0038026
1152	20	44506418	44506418	G	A	exonic	ZSWIM3	NA	synonymous SNV	ZSWIM3:NM_080752:exon2:c.G1221A:p.R407R	exonic	ENSG00000132801	NA	synonymous SNV	ENSG00000132801:ENST00000255152:exon2:c.G1221A:p.R407R,ENSG00000132801:ENST00000454862:exon3:c.G1203A:p.R401R	NA	NA	20q13.12	Score=767;Name=V$AHR_01	NA	NA	NA	rs1045493	0.5	0.5	0.467	0.477037	0.5517	0.4573	0.6441	0.3268	0.5051	0.58	0.47	0.6	0.33	0.549	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.167601	NA	NA	0.562326	0.394689	NA	0.319	NA	5.0036406
1152	19	51363448	51363448	A	G	UTR3	KLK3	NM_001648:c.*65A>G,NM_001030047:c.*576A>G,NM_001030048:c.*65A>G	NA	NA	UTR3	ENSG00000142515	ENST00000422986:c.*507A>G,ENST00000326003:c.*65A>G,ENST00000595392:c.*352A>G,ENST00000595952:c.*65A>G,ENST00000360617:c.*576A>G,ENST00000598145:c.*65A>G	NA	NA	NA	NA	19q13.33	NA	Name=ELF1_(SC-631)	NA	NA	rs1058274	0.21	0.21	0.208	0.204073	0.33	0.0575	0.1499	0.2254	0.2352	0.32	0.06	0.16	0.23	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.221491	NA	NA	NA	NA	NA	0.232	NA	5.0033334
1152	20	1538249	1538249	C	T	exonic	SIRPD	NA	synonymous SNV	SIRPD:NM_178460:exon1:c.G51A:p.L17L	exonic	ENSG00000125900,ENSG00000260861	NA	synonymous SNV	ENSG00000125900:ENST00000381621:exon1:c.G51A:p.L17L,ENSG00000125900:ENST00000381623:exon1:c.G51A:p.L17L	NA	NA	20p13	NA	NA	NA	NA	rs2250055	0.11	0.11	0.096	0.107029	0.2306	0.0188	0.1153	0.0219	0.18	0.22	0.02	0.13	0.02	0.1938	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.932329	NA	NA	0.238953	0.057195	NA	0.051	NA	5.0033136
1152	6	12294258	12294258	A	G	exonic	EDN1	NA	synonymous SNV	EDN1:NM_001168319:exon3:c.A315G:p.E105E,EDN1:NM_001955:exon3:c.A318G:p.E106E	exonic	ENSG00000078401	NA	synonymous SNV	ENSG00000078401:ENST00000379375:exon3:c.A318G:p.E106E	NA	NA	6p24.1	NA	Name=GR,Pol2	Name=31	NA	rs5369	0.9	0.9	0.896	0.901358	0.8807	0.9772	0.8963	0.8306	0.9438	0.89	0.99	0.89	0.84	0.9027	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.039699	NA	NA	0.88093	0.855197	NA	0.877	NA	5.0023366
1152	1	168215575	168215575	G	A	ncRNA_exonic	ANKRD36BP1	NA	NA	NA	ncRNA_exonic	ENSG00000214262	NA	NA	NA	Score=395;Name=lod=54	NA	1q24.2	NA	NA	NA	NA	rs2205697	0.51	0.51	0.491	0.457867	0.665	0.4385	0.5216	0.3109	0.4182	0.67	0.44	0.54	0.32	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.679382	NA	NA	NA	NA	NA	0.514	NA	5.0016666
1152	5	89820984	89820984	T	C	exonic	LYSMD3	NA	synonymous SNV	LYSMD3:NM_198273:exon2:c.A123G:p.E41E	exonic	ENSG00000176018	NA	synonymous SNV	ENSG00000176018:ENST00000315948:exon2:c.A123G:p.E41E,ENSG00000176018:ENST00000453259:exon2:c.A123G:p.E41E,ENSG00000176018:ENST00000509384:exon2:c.A123G:p.E41E,ENSG00000176018:ENST00000500869:exon3:c.A123G:p.E41E	Score=676;Name=lod=743	NA	5q14.3	NA	NA	NA	NA	rs10069050	0.58	0.58	0.626	0.61262	0.5408	0.6081	0.428	0.7678	0.6125	0.53	0.57	0.44	0.75	0.5627	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.060303	NA	NA	0.562076	0.722193	NA	0.63	NA	5.0010906
1152	7	100552978	100552978	T	C	intergenic	ACHE,MUC12	dist=59437;dist=59926	NA	NA	exonic	ENSG00000169894	NA	synonymous SNV	ENSG00000169894:ENST00000414964:exon1:c.T93C:p.N31N,ENSG00000169894:ENST00000422757:exon1:c.T93C:p.N31N,ENSG00000169894:ENST00000319509:exon2:c.T1623C:p.N541N	Score=278;Name=lod=18	NA	7q22.1	NA	NA	NA	NA	rs73163765	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.499	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.014832	NA	NA	NA	NA	NA	0.5	NA	5.001
1152	1	168215505	168215505	A	G	ncRNA_exonic	ANKRD36BP1	NA	NA	NA	ncRNA_exonic	ENSG00000214262	NA	NA	NA	Score=395;Name=lod=54	NA	1q24.2	NA	NA	NA	NA	rs2205698	0.55	0.55	0.537	0.505591	0.666	0.4385	0.5303	0.4864	0.4182	0.67	0.44	0.55	0.48	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.017183	NA	NA	NA	NA	NA	0.558	NA	5.0006666
1152	11	3913738	3913738	A	G	intronic	STIM1	NA	NA	NA	ncRNA_exonic	ENSG00000230593	NA	NA	NA	Score=711;Name=lod=1029	NA	11p15.4	NA	NA	NA	NA	rs10767684	0.27	0.27	0.237	0.295527	0.333	0.3442	0.2954	0.1619	0.3875	0.33	0.34	0.22	0.12	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.018184	NA	NA	NA	NA	NA	0.232	NA	5.0003333
1152	7	100549650	100549650	A	G	intergenic	ACHE,MUC12	dist=56109;dist=63254	NA	NA	exonic	ENSG00000228273	NA	synonymous SNV	ENSG00000228273:ENST00000379458:exon2:c.A231G:p.T77T	NA	NA	7q22.1	NA	Name=CTCF	NA	NA	rs73398716	NA	NA	NA	0.00179712	NA	0.0089	NA	NA	NA	NA	NA	NA	NA	0.4999	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.526708	NA	NA	NA	NA	NA	0.406	NA	5.0001
1152	1	1581926	1581926	G	T	intronic	CDK11B	NA	NA	NA	intronic	ENSG00000248333	NA	NA	NA	NA	NA	1p36.33	NA	NA	Name=11	NA	rs61774917	NA	NA	0.189	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.45024	NA	NA	NA	NA	NA	NA	NA	5
1152	1	11854671	11854671	C	A	intronic	MTHFR	NA	NA	NA	intronic	ENSG00000177000	NA	NA	NA	NA	NA	1p36.22	NA	NA	Name=6	NA	rs12121543	0.19	0.19	0.191	NA	NA	NA	NA	NA	NA	0.27	0.18	0.14	0.13	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.963486	NA	NA	NA	NA	NA	0.174	NA	5
1152	1	16935283	16935283	T	C	intronic	NBPF1	NA	NA	NA	intronic	ENSG00000219481	NA	NA	NA	NA	NA	1p36.13	NA	Name=ELF1_(SC-631)	NA	NA	rs1762922	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.28083	NA	NA	NA	NA	NA	0.413	NA	5
1152	1	16969715	16969715	A	G	intergenic	CROCCP2,MST1P2	dist=12314;dist=2354	NA	NA	ncRNA_intronic	ENSG00000215908	NA	NA	NA	Score=355;Name=lod=37	NA	1p36.13	NA	NA	NA	NA	rs9329444	NA	NA	0.461	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.023335	NA	NA	NA	NA	NA	0.152	NA	5
1152	1	26898575	26898575	C	T	intronic	RPS6KA1	NA	NA	NA	intronic	ENSG00000117676	NA	NA	NA	NA	NA	1p36.11	NA	NA	NA	NA	NA	NA	NA	0.001	0.000199681	NA	NA	0.0014	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.833038	NA	NA	NA	NA	NA	0.007	NA	5
1152	1	34002922	34002922	C	G	intronic	CSMD2	NA	NA	NA	intronic	ENSG00000121904	NA	NA	NA	NA	NA	1p35.1	NA	NA	NA	NA	NA	NA	NA	NA	0.000199681	NA	NA	0.0014	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.310988	NA	NA	NA	NA	NA	NA	NA	5
1152	1	39845250	39845250	A	G	intronic	MACF1	NA	NA	NA	intronic	ENSG00000127603	NA	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.349185	2.349185	NA	NA	NA	NA	NA	NA	5
1152	1	39934228	39934228	G	A	intronic	MACF1	NA	NA	NA	intronic	ENSG00000127603	NA	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	NA	NA	NA	NA	0.000199681	NA	NA	0.0014	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.487404	NA	NA	NA	NA	NA	NA	NA	5
1152	1	43126352	43126352	C	T	intronic	PPIH	NA	NA	NA	intronic	ENSG00000171960	NA	NA	NA	NA	NA	1p34.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.610516	NA	NA	NA	NA	NA	NA	NA	5
1152	1	59096652	59096652	C	A	intergenic	TACSTD2,MYSM1	dist=53486;dist=23759	NA	NA	ncRNA_exonic	ENSG00000185839	NA	NA	NA	Score=606;Name=lod=386	NA	1p32.1	NA	NA	NA	NA	rs78363929	NA	NA	0.015	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.098	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.844175	NA	NA	NA	NA	NA	0.101	NA	5
1152	1	59096669	59096669	C	G	intergenic	TACSTD2,MYSM1	dist=53503;dist=23742	NA	NA	ncRNA_exonic	ENSG00000185839	NA	NA	NA	Score=606;Name=lod=386	NA	1p32.1	NA	NA	NA	NA	rs75913621	NA	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.611	NA	NA	NA	NA	NA	0.123	NA	5
1152	1	111731211	111731211	T	C	intronic	DENND2D	NA	NA	NA	intronic	ENSG00000162777	NA	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	NA	NA	NA	NA	0.00139776	NA	NA	NA	NA	0.0072	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.438662	NA	NA	NA	NA	NA	NA	NA	5
1152	1	116287403	116287403	A	G	intronic	CASQ2	NA	NA	NA	intronic	ENSG00000118729	NA	NA	NA	NA	NA	1p13.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.48642	NA	NA	NA	NA	NA	NA	NA	5
1152	1	144868239	144868239	G	A	intronic	NBPF9,PDE4DIP	NA	NA	NA	intronic	ENSG00000178104	NA	NA	NA	NA	NA	1q21.1	NA	NA	Name=2	NA	rs1618966	NA	NA	0.257	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.141623	NA	NA	NA	NA	NA	0.181	NA	5
1152	1	144886409	144886409	A	C	intronic	NBPF9,PDE4DIP	NA	NA	NA	intronic	ENSG00000178104	NA	NA	NA	NA	NA	1q21.1	NA	NA	Name=18	NA	rs1620507	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.24625	NA	NA	NA	NA	NA	0.5	NA	5
1152	1	144916486	144916486	T	G	intronic	NBPF9,PDE4DIP	NA	NA	NA	intronic	ENSG00000178104	NA	NA	NA	NA	NA	1q21.1	NA	NA	Name=3	NA	rs1699798	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.559601	NA	NA	NA	NA	NA	0.5	NA	5
1152	1	144916493	144916493	A	G	intronic	NBPF9,PDE4DIP	NA	NA	NA	intronic	ENSG00000178104	NA	NA	NA	NA	NA	1q21.1	NA	NA	Name=3	NA	rs1699799	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.864697	NA	NA	NA	NA	NA	0.5	NA	5
1152	1	145290320	145290320	C	T	intronic	NBPF9	NA	NA	NA	intronic	ENSG00000163386,ENSG00000213240,ENSG00000255168	NA	NA	NA	NA	NA	1q21.1	NA	NA	Name=37	NA	rs2949607	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.352461	NA	NA	NA	NA	NA	0.174	NA	5
1152	1	145290346	145290346	A	G	intronic	NBPF9	NA	NA	NA	intronic	ENSG00000163386,ENSG00000213240,ENSG00000255168	NA	NA	NA	NA	NA	1q21.1	NA	NA	Name=37	NA	rs2746747	NA	NA	0.374	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.343432	NA	NA	NA	NA	NA	0.174	NA	5
1152	1	145290377	145290377	T	C	intronic	NBPF9	NA	NA	NA	intronic	ENSG00000163386,ENSG00000213240,ENSG00000255168	NA	NA	NA	NA	NA	1q21.1	NA	NA	Name=37	NA	rs2982633	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.521424	NA	NA	NA	NA	NA	0.007	NA	5
1152	1	145297788	145297788	G	A	intronic	NBPF10,NBPF9	NA	NA	NA	intronic	ENSG00000163386,ENSG00000255168	NA	NA	NA	NA	NA	1q21.1	NA	NA	Name=8	NA	rs55732260	0.2	0.2	0.173	NA	NA	NA	NA	NA	NA	0.32	0.12	0.31	0.04	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.505872	NA	NA	NA	NA	NA	NA	NA	5
1152	1	149262554	149262554	T	C	intergenic	LOC645166,LOC388692	dist=309500;dist=16922	NA	NA	ncRNA_exonic	ENSG00000223779,ENSG00000242352	NA	NA	NA	Score=794;Name=lod=2242	NA	1q21.2	NA	NA	NA	NA	rs656978	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.159895	NA	NA	NA	NA	NA	0.145	NA	5
1152	1	149726239	149726239	T	A	intergenic	LINC00869,HIST2H2BF	dist=53506;dist=28006	NA	NA	ncRNA_exonic	ENSG00000226500	NA	NA	NA	Score=358;Name=lod=38	NA	1q21.2	NA	NA	NA	NA	rs646092	NA	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.742105	NA	NA	NA	NA	NA	0.007	NA	5
1152	1	197513928	197513928	G	A	intronic	DENND1B	NA	NA	NA	intronic	ENSG00000213047	NA	NA	NA	NA	NA	1q31.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.928033	NA	NA	NA	NA	NA	0.007	NA	5
1152	1	201020335	201020335	G	T	intronic	CACNA1S	NA	NA	NA	intronic	ENSG00000081248	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.232822	NA	NA	NA	NA	NA	NA	NA	5
1152	1	203677315	203677315	T	G	intronic	ATP2B4	NA	NA	NA	intronic	ENSG00000058668	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.264031	1.264031	NA	NA	NA	NA	NA	NA	5
1152	1	204499738	204499738	C	T	intronic	MDM4	NA	NA	NA	intronic	ENSG00000198625	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.072516	2.072516	NA	NA	NA	NA	NA	NA	5
1152	1	227680783	227680783	T	C	intergenic	CDC42BPA,ZNF678	dist=174957;dist=70437	NA	NA	ncRNA_exonic	ENSG00000237469	NA	NA	NA	Score=840;Name=lod=3441	NA	1q42.13	NA	NA	NA	NA	rs2814075	NA	NA	0.653	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.087828	NA	NA	NA	NA	NA	0.225	NA	5
1152	2	71191498	71191498	A	T	intronic	ATP6V1B1	NA	NA	NA	intronic	ENSG00000116039,ENSG00000258881	NA	NA	NA	NA	NA	2p13.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.537466	NA	NA	NA	NA	NA	NA	NA	5
1152	2	91778140	91778140	C	T	intergenic	NONE,LOC654342	dist=NONE;dist=46569	NA	NA	ncRNA_intronic	ENSG00000233991	NA	NA	NA	NA	NA	2p11.1	NA	NA	Name=62	NA	rs2557999	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.283603	NA	NA	NA	NA	NA	0.457	NA	5
1152	2	91778144	91778144	G	A	intergenic	NONE,LOC654342	dist=NONE;dist=46565	NA	NA	ncRNA_intronic	ENSG00000233991	NA	NA	NA	NA	NA	2p11.1	NA	NA	Name=62	NA	rs2557998	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.202824	NA	NA	NA	NA	NA	0.457	NA	5
1152	2	91778168	91778168	G	C	intergenic	NONE,LOC654342	dist=NONE;dist=46541	NA	NA	ncRNA_intronic	ENSG00000233991	NA	NA	NA	NA	NA	2p11.1	NA	NA	Name=62	NA	rs2454365	NA	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.192193	NA	NA	NA	NA	NA	0.362	NA	5
1152	2	91800035	91800035	T	C	intergenic	NONE,LOC654342	dist=NONE;dist=24674	NA	NA	ncRNA_intronic	ENSG00000233991	NA	NA	NA	NA	NA	2p11.1	NA	Name=BRF2	NA	NA	rs2537108	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.082638	NA	NA	NA	NA	NA	0.5	NA	5
1152	2	91800106	91800106	T	C	intergenic	NONE,LOC654342	dist=NONE;dist=24603	NA	NA	ncRNA_intronic	ENSG00000233991	NA	NA	NA	NA	NA	2p11.1	NA	Name=SUZ12,BRF2	NA	NA	rs2537114	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.099221	NA	NA	NA	NA	NA	0.5	NA	5
1152	2	91800832	91800832	C	T	intergenic	NONE,LOC654342	dist=NONE;dist=23877	NA	NA	ncRNA_exonic	ENSG00000233991	NA	NA	NA	NA	NA	2p11.1	NA	NA	Name=8	NA	rs1640041	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.29217	1.29217	NA	NA	NA	NA	0.101	NA	5
1152	2	91800863	91800863	T	G	intergenic	NONE,LOC654342	dist=NONE;dist=23846	NA	NA	ncRNA_exonic	ENSG00000233991	NA	NA	NA	NA	NA	2p11.1	NA	NA	Name=8	NA	rs1640042	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.091298	NA	NA	NA	NA	NA	0.5	NA	5
1152	2	91800939	91800939	T	C	intergenic	NONE,LOC654342	dist=NONE;dist=23770	NA	NA	ncRNA_exonic	ENSG00000233991	NA	NA	NA	NA	NA	2p11.1	NA	NA	Name=8	NA	rs1640043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.22589	NA	NA	NA	NA	NA	0.5	NA	5
1152	2	91805122	91805122	T	C	intergenic	NONE,LOC654342	dist=NONE;dist=19587	NA	NA	ncRNA_intronic	ENSG00000233991	NA	NA	NA	NA	NA	2p11.1	NA	NA	Name=3	NA	rs1811227	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.213721	NA	NA	NA	NA	NA	0.5	NA	5
1152	2	91809039	91809039	G	A	intergenic	NONE,LOC654342	dist=NONE;dist=15670	NA	NA	ncRNA_intronic	ENSG00000233991	NA	NA	NA	NA	NA	2p11.1	NA	NA	Name=54	NA	rs1649490	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.82792	NA	NA	NA	NA	NA	0.493	NA	5
1152	2	91809227	91809227	A	G	intergenic	NONE,LOC654342	dist=NONE;dist=15482	NA	NA	ncRNA_intronic	ENSG00000233991	NA	NA	NA	NA	NA	2p11.1	NA	NA	Name=54	NA	rs2536993	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.582529	NA	NA	NA	NA	NA	0.471	NA	5
1152	2	91924804	91924804	T	C	intergenic	LOC654342,GGT8P	dist=76829;dist=38564	NA	NA	ncRNA_exonic	ENSG00000223703	NA	NA	NA	Score=563;Name=lod=260	NA	2p11.1	NA	NA	NA	NA	rs925176	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.075532	NA	NA	NA	NA	NA	NA	NA	5
1152	2	95400720	95400720	C	G	intergenic	NONE,FAM95A	dist=NONE;dist=20351	NA	NA	ncRNA_exonic	ENSG00000227265	NA	NA	NA	Score=517;Name=lod=168	NA	2q11.1	NA	NA	NA	NA	rs199537868	NA	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.986405	NA	NA	NA	NA	NA	NA	NA	5
1152	2	130751606	130751606	G	A	intergenic	RAB6C,LOC440905	dist=11295;dist=31966	NA	NA	ncRNA_exonic	ENSG00000217289	NA	NA	NA	Score=720;Name=lod=1121	NA	2q21.1	NA	NA	NA	NA	rs12692104	NA	NA	0.497	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.096766	NA	NA	NA	NA	NA	0.094	NA	5
1152	2	130751619	130751619	C	T	intergenic	RAB6C,LOC440905	dist=11308;dist=31953	NA	NA	ncRNA_intronic	ENSG00000180178	NA	NA	NA	Score=720;Name=lod=1121	NA	2q21.1	NA	NA	NA	NA	rs111243295	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.064887	NA	NA	NA	NA	NA	0.029	NA	5
1152	2	130751655	130751655	C	T	intergenic	RAB6C,LOC440905	dist=11344;dist=31917	NA	NA	ncRNA_intronic	ENSG00000180178	NA	NA	NA	Score=720;Name=lod=1121	NA	2q21.1	NA	NA	NA	NA	rs151120298	NA	NA	0.041	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.238889	NA	NA	NA	NA	NA	NA	NA	5
1152	2	130987180	130987180	G	C	intergenic	TUBA3E,CCDC115	dist=31146;dist=108636	NA	NA	ncRNA_exonic	ENSG00000213225	NA	NA	NA	Score=582;Name=lod=310	NA	2q21.1	NA	NA	NA	NA	rs13407565	0.08	0.08	0.07	NA	NA	NA	NA	NA	NA	0.04	0.08	0.1	0.14	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.134722	NA	NA	NA	NA	NA	0.043	NA	5
1152	2	130987233	130987233	C	T	intergenic	TUBA3E,CCDC115	dist=31199;dist=108583	NA	NA	ncRNA_exonic	ENSG00000213225	NA	NA	NA	Score=458;Name=lod=97	NA	2q21.1	NA	NA	NA	NA	rs72863885	NA	NA	0.216	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.021672	NA	NA	NA	NA	NA	0.022	NA	5
1152	2	130987239	130987239	G	A	intergenic	TUBA3E,CCDC115	dist=31205;dist=108577	NA	NA	ncRNA_exonic	ENSG00000213225	NA	NA	NA	Score=458;Name=lod=97	NA	2q21.1	NA	NA	NA	NA	rs72863888	NA	NA	0.229	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.007805	NA	NA	NA	NA	NA	0.014	NA	5
1152	2	130988166	130988166	A	G	intergenic	TUBA3E,CCDC115	dist=32132;dist=107650	NA	NA	ncRNA_exonic	ENSG00000213225	NA	NA	NA	Score=728;Name=lod=1216	NA	2q21.1	NA	NA	NA	NA	rs201275727	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.026731	NA	NA	NA	NA	NA	NA	NA	5
1152	2	130988203	130988203	C	T	intergenic	TUBA3E,CCDC115	dist=32169;dist=107613	NA	NA	ncRNA_exonic	ENSG00000213225	NA	NA	NA	Score=728;Name=lod=1216	NA	2q21.1	NA	NA	NA	NA	rs3888998	NA	NA	0.185	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.213249	NA	NA	NA	NA	NA	0.022	NA	5
1152	2	130988216	130988216	C	G	intergenic	TUBA3E,CCDC115	dist=32182;dist=107600	NA	NA	ncRNA_exonic	ENSG00000213225	NA	NA	NA	Score=728;Name=lod=1216	NA	2q21.1	NA	NA	NA	NA	rs3888997	NA	NA	0.217	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.359119	NA	NA	NA	NA	NA	0.022	NA	5
1152	2	130988276	130988276	C	T	intergenic	TUBA3E,CCDC115	dist=32242;dist=107540	NA	NA	ncRNA_exonic	ENSG00000213225	NA	NA	NA	Score=728;Name=lod=1216	NA	2q21.1	NA	NA	NA	NA	rs3894178	NA	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.085906	NA	NA	NA	NA	NA	NA	NA	5
1152	2	133067025	133067025	C	G	intergenic	ANKRD30BL,GPR39	dist=51483;dist=107122	NA	NA	ncRNA_intronic	ENSG00000018607	NA	NA	NA	NA	NA	2q21.2	NA	Name=MafK_(ab50322),MafK_(SC-477),MafF_(M8194)	NA	NA	rs2459643	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.364132	NA	NA	NA	NA	NA	0.493	NA	5
1152	2	133070449	133070449	T	C	intergenic	ANKRD30BL,GPR39	dist=54907;dist=103698	NA	NA	ncRNA_exonic	ENSG00000018607	NA	NA	NA	Score=289;Name=lod=20	NA	2q21.2	NA	NA	NA	NA	rs2459647	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.325494	NA	NA	NA	NA	NA	0.5	NA	5
1152	2	133075298	133075298	T	C	intergenic	ANKRD30BL,GPR39	dist=59756;dist=98849	NA	NA	ncRNA_exonic	ENSG00000018607	NA	NA	NA	Score=391;Name=lod=52	NA	2q21.2	NA	NA	NA	NA	rs75737268	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.563338	NA	NA	NA	NA	NA	0.493	NA	5
1152	2	133075386	133075386	G	A	intergenic	ANKRD30BL,GPR39	dist=59844;dist=98761	NA	NA	ncRNA_exonic	ENSG00000018607	NA	NA	NA	Score=363;Name=lod=40	NA	2q21.2	NA	NA	NA	NA	rs7349216	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.227576	NA	NA	NA	NA	NA	0.5	NA	5
1152	2	133075674	133075674	G	C	intergenic	ANKRD30BL,GPR39	dist=60132;dist=98473	NA	NA	ncRNA_exonic	ENSG00000018607	NA	NA	NA	Score=325;Name=lod=28	NA	2q21.2	NA	NA	NA	NA	rs7340192	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.103387	NA	NA	NA	NA	NA	0.464	NA	5
1152	2	133075726	133075726	A	G	intergenic	ANKRD30BL,GPR39	dist=60184;dist=98421	NA	NA	ncRNA_exonic	ENSG00000018607	NA	NA	NA	Score=437;Name=lod=80	NA	2q21.2	NA	NA	NA	NA	rs2598810	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.40236	1.40236	NA	NA	NA	NA	0.5	NA	5
1152	2	133076032	133076032	T	G	intergenic	ANKRD30BL,GPR39	dist=60490;dist=98115	NA	NA	ncRNA_exonic	ENSG00000018607	NA	NA	NA	NA	NA	2q21.2	NA	Name=SETDB1	NA	NA	rs2598809	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.994168	NA	NA	NA	NA	NA	0.5	NA	5
1152	2	176190719	176190719	G	C	intergenic	ATP5G3,KIAA1715	dist=144229;dist=599691	NA	NA	ncRNA_intronic	ENSG00000229066	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.050077	NA	NA	NA	NA	NA	NA	NA	5
1152	2	204056014	204056014	T	C	intronic	NBEAL1	NA	NA	NA	intronic	ENSG00000144426	NA	NA	NA	NA	NA	2q33.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.603186	1.603186	NA	NA	NA	NA	NA	NA	5
1152	2	242285721	242285721	C	T	intronic	SEPT2	NA	NA	NA	intronic	ENSG00000168385	NA	NA	NA	NA	NA	2q37.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.747905	NA	NA	NA	NA	NA	NA	NA	5
1152	3	49725948	49725948	C	T	intronic	MST1	NA	NA	NA	intronic	ENSG00000173531	NA	NA	NA	NA	NA	3p21.31	NA	NA	Name=2	NA	rs141881740	NA	NA	0.227	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.245085	NA	NA	NA	NA	NA	NA	NA	5
1152	3	49735224	49735224	C	G	intronic	RNF123	NA	NA	NA	intronic	ENSG00000164068	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.191751	2.191751	NA	NA	NA	NA	NA	NA	5
1152	3	53220865	53220865	G	T	intronic	PRKCD	NA	NA	NA	intronic	ENSG00000163932	NA	NA	NA	NA	NA	3p21.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.947927	1.947927	NA	NA	NA	NA	NA	NA	5
1152	3	58127508	58127508	G	A	intronic	FLNB	NA	NA	NA	intronic	ENSG00000136068	NA	NA	NA	NA	NA	3p14.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.45172	NA	NA	NA	NA	NA	NA	NA	5
1152	4	7728370	7728370	A	T	intronic	SORCS2	NA	NA	NA	intronic	ENSG00000184985	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.426614	NA	NA	NA	NA	NA	0.007	NA	5
1152	4	8176449	8176449	C	T	intergenic	ABLIM2,SH3TC1	dist=15890;dist=24611	NA	NA	ncRNA_exonic	ENSG00000250471	NA	NA	NA	Score=714;Name=lod=1062	NA	4p16.1	NA	NA	NA	NA	rs73799619	0.0032	0.0032	0.004	0.00698882	NA	NA	0.0058	0.0234	NA	NA	NA	NA	0.01	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.611358	1.611358	NA	NA	NA	NA	0.007	NA	5
1152	4	40133587	40133587	A	G	intronic	N4BP2	NA	NA	NA	intronic	ENSG00000078177	NA	NA	NA	NA	NA	4p14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.694695	1.694695	NA	NA	NA	NA	NA	NA	5
1152	4	70115136	70115136	A	C	intergenic	UGT2B11,UGT2B28	dist=34687;dist=31081	NA	NA	ncRNA_exonic	ENSG00000249763	NA	NA	NA	Score=401;Name=lod=57	NA	4q13.2	NA	NA	NA	NA	rs181686292	0.0014	0.0014	NA	0.000998403	NA	NA	0.0058	0.0008	NA	NA	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.046543	NA	NA	NA	NA	NA	NA	NA	5
1152	4	74951801	74951801	A	G	intergenic	PPBPP2,CXCL2	dist=30685;dist=10953	NA	NA	ncRNA_exonic	ENSG00000251017	NA	NA	NA	Score=452;Name=lod=92	NA	4q13.3	NA	NA	NA	NA	rs57958350	0.01	0.01	0.011	0.0139776	NA	NA	0.0029	0.0514	NA	NA	NA	0.0028	0.03	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.147154	NA	NA	NA	NA	NA	0.007	NA	5
1152	4	87024258	87024258	G	A	intronic	MAPK10	NA	NA	NA	intronic	ENSG00000109339	NA	NA	NA	NA	NA	4q21.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.289721	2.289721	NA	NA	NA	NA	NA	NA	5
1152	4	120170142	120170142	A	G	intronic	USP53	NA	NA	NA	intronic	ENSG00000145390	NA	NA	NA	NA	NA	4q26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.408106	NA	NA	NA	NA	NA	NA	NA	5
1152	4	124322633	124322633	C	A	intronic	SPRY1	NA	NA	NA	intronic	ENSG00000164056	NA	NA	NA	NA	NA	4q28.1	NA	NA	Name=11	NA	rs300573	0.43	0.43	0.162	NA	NA	NA	NA	NA	NA	0.61	0.38	0.49	0.18	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.273764	NA	NA	NA	NA	NA	0.355	NA	5
1152	4	146377363	146377363	G	A	intergenic	OTUD4,SMAD1	dist=276531;dist=25588	NA	NA	ncRNA_exonic	ENSG00000248745	NA	NA	NA	Score=355;Name=lod=37	NA	4q31.21	NA	NA	NA	NA	rs150280278	0.0018	0.0018	0.001	0.000998403	NA	NA	0.0014	0.003	NA	0.0013	NA	0.0028	0.0041	NA	0.0041	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.038018	NA	NA	NA	NA	NA	NA	NA	5
1152	4	156828804	156828804	T	C	intronic	TDO2	NA	NA	NA	intronic	ENSG00000151790	NA	NA	NA	NA	NA	4q32.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.456924	NA	NA	NA	NA	NA	NA	NA	5
1152	4	159772353	159772353	T	C	intronic	FNIP2	NA	NA	NA	intronic	ENSG00000052795	NA	NA	NA	NA	NA	4q32.1	NA	Name=CTCF	NA	NA	rs190383616	0.0014	0.0014	NA	0.00279553	NA	NA	0.0029	0.0091	NA	NA	NA	0.0028	0.0041	NA	0.0041	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.863922	NA	NA	NA	NA	NA	NA	NA	5
1152	4	190838674	190838674	A	C	intergenic	LOC401164,FRG1	dist=1315612;dist=23300	NA	NA	ncRNA_intronic	ENSG00000245685	NA	NA	NA	NA	NA	4q35.2	NA	NA	Name=5	NA	rs62343961	NA	NA	0.306	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.945264	NA	NA	NA	NA	NA	NA	NA	5
1152	4	190894826	190894826	G	A	intergenic	FRG1,LOC100288255	dist=10467;dist=50697	NA	NA	ncRNA_exonic	ENSG00000249462	NA	NA	NA	Score=471;Name=lod=109	NA	4q35.2	NA	NA	NA	NA	rs73027003	NA	NA	0.161	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.068433	NA	NA	NA	NA	NA	NA	NA	5
1152	4	190894898	190894898	G	A	intergenic	FRG1,LOC100288255	dist=10539;dist=50625	NA	NA	ncRNA_exonic	ENSG00000249462	NA	NA	NA	Score=471;Name=lod=109	NA	4q35.2	NA	NA	NA	NA	rs73027006	NA	NA	0.149	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.690282	NA	NA	NA	NA	NA	NA	NA	5
1152	5	6750385	6750385	G	T	intronic	PAPD7	NA	NA	NA	intronic	ENSG00000112941	NA	NA	NA	NA	NA	5p15.31	NA	NA	NA	NA	NA	NA	NA	NA	0.00159744	NA	0.001	NA	NA	0.0072	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.82733	NA	NA	NA	NA	NA	0.007	NA	5
1152	5	53155463	53155463	G	T	intergenic	NDUFS4,ARL15	dist=176292;dist=25151	NA	NA	ncRNA_exonic	ENSG00000217791	NA	NA	NA	Score=641;Name=lod=538	NA	5q11.2	NA	NA	NA	NA	rs271252	0.44	0.44	0.412	NA	NA	NA	NA	NA	NA	0.54	0.29	0.55	0.39	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.057227	NA	NA	NA	NA	NA	0.486	NA	5
1152	5	68602799	68602799	C	T	intronic	CCDC125	NA	NA	NA	intronic	ENSG00000183323	NA	NA	NA	NA	NA	5q13.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.952418	NA	NA	NA	NA	NA	NA	NA	5
1152	5	74656082	74656082	T	C	intronic	HMGCR	NA	NA	NA	intronic	ENSG00000113161	NA	NA	NA	NA	NA	5q13.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.131991	NA	NA	NA	NA	NA	NA	NA	5
1152	5	76357668	76357668	A	G	intronic	AGGF1	NA	NA	NA	intronic	ENSG00000164252	NA	NA	NA	NA	NA	5q13.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.006085	NA	NA	NA	NA	NA	NA	NA	5
1152	5	98870188	98870188	A	G	intergenic	LOC100289230,LOC100133050	dist=603475;dist=845021	NA	NA	ncRNA_exonic	ENSG00000227762	NA	NA	NA	Score=692;Name=lod=869	NA	5q21.1	NA	NA	NA	NA	rs62375026	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.190365	NA	NA	NA	NA	NA	NA	NA	5
1152	5	110284619	110284619	C	T	intergenic	SLC25A46,TSLP	dist=186135;dist=122771	NA	NA	ncRNA_exonic	ENSG00000248966	NA	NA	NA	Score=512;Name=lod=160	NA	5q22.1	NA	NA	NA	NA	rs73787829	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.338837	NA	NA	NA	NA	NA	0.319	NA	5
1152	5	110284652	110284652	A	G	intergenic	SLC25A46,TSLP	dist=186168;dist=122738	NA	NA	ncRNA_exonic	ENSG00000248966	NA	NA	NA	Score=512;Name=lod=160	NA	5q22.1	NA	NA	NA	NA	rs73787831	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.087126	NA	NA	NA	NA	NA	0.174	NA	5
1152	5	110284665	110284665	A	G	intergenic	SLC25A46,TSLP	dist=186181;dist=122725	NA	NA	ncRNA_exonic	ENSG00000248966	NA	NA	NA	Score=512;Name=lod=160	NA	5q22.1	NA	NA	NA	NA	rs79180940	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.155328	NA	NA	NA	NA	NA	0.167	NA	5
1152	5	110285508	110285508	T	C	intergenic	SLC25A46,TSLP	dist=187024;dist=121882	NA	NA	ncRNA_exonic	ENSG00000248966	NA	NA	NA	Score=596;Name=lod=351	NA	5q22.1	NA	NA	NA	NA	rs76961056	NA	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.003625	NA	NA	NA	NA	NA	NA	NA	5
1152	5	126507434	126507434	A	C	intergenic	C5orf63,MEGF10	dist=98250;dist=119022	NA	NA	ncRNA_exonic	ENSG00000250080	NA	NA	NA	Score=762;Name=lod=1663	NA	5q23.2	NA	NA	NA	NA	rs248079	0.42	0.42	0.421	NA	NA	NA	NA	NA	NA	0.5	0.34	0.44	0.39	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.18208	NA	NA	NA	NA	NA	0.362	NA	5
1152	5	137735798	137735798	C	T	intronic	KDM3B	NA	NA	NA	intronic	ENSG00000120733	NA	NA	NA	NA	NA	5q31.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.163337	NA	NA	NA	NA	NA	NA	NA	5
1152	5	141034123	141034123	T	A	intronic	ARAP3	NA	NA	NA	intronic	ENSG00000120318	NA	NA	NA	NA	NA	5q31.3	NA	NA	Name=78	NA	rs6580194	0.6	0.6	0.603	NA	NA	NA	NA	NA	NA	0.63	0.33	0.7	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.563135	NA	NA	NA	NA	NA	0.543	NA	5
1152	5	141304318	141304318	T	G	intronic	KIAA0141	NA	NA	NA	intronic	ENSG00000081791	NA	NA	NA	NA	NA	5q31.3	NA	Name=Pol2	NA	NA	rs10058907	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.065	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.575912	NA	NA	NA	NA	NA	0.043	NA	5
1152	5	144608394	144608394	A	T	intergenic	KCTD16,PRELID2	dist=751450;dist=530188	NA	NA	ncRNA_exonic	ENSG00000215325,ENSG00000251031	NA	NA	NA	Score=580;Name=lod=303	NA	5q32	NA	NA	NA	NA	rs68123897	0.17	0.17	0.143	NA	NA	NA	NA	NA	NA	0.3	0.04	0.22	0.07	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.019595	NA	0.01	NA	NA	NA	0.217	NA	5
1152	5	180041274	180041274	T	G	intronic	FLT4	NA	NA	NA	intronic	ENSG00000037280	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.146999	NA	NA	NA	NA	NA	NA	NA	5
1152	6	599264	599264	G	T	intronic	EXOC2	NA	NA	NA	intronic	ENSG00000112685	NA	NA	NA	NA	NA	6p25.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.158192	NA	NA	NA	NA	NA	NA	NA	5
1152	6	29912754	29912754	G	A	intronic	HLA-A	NA	NA	NA	intronic	ENSG00000206503	NA	NA	NA	NA	NA	6p22.1	NA	Name=Pol2-4H8	NA	NA	rs3823323	0.47	0.47	0.444	NA	NA	NA	NA	NA	NA	0.5	0.42	0.48	0.5	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.07856	3.07856	NA	NA	NA	NA	0.203	NA	5
1152	6	29913111	29913111	A	G	intronic	HLA-A	NA	NA	NA	intronic	ENSG00000206503	NA	NA	NA	NA	NA	6p22.1	NA	Name=Pol2,Pol2-4H8	NA	NA	rs3823343	0.19	0.19	0.187	NA	NA	NA	NA	NA	NA	0.15	0.18	0.18	0.26	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.290865	NA	NA	NA	NA	NA	0.087	NA	5
1152	6	31248993	31248993	C	T	intergenic	HLA-C,HLA-B	dist=9080;dist=72656	NA	NA	ncRNA_exonic	ENSG00000227939	NA	NA	NA	Score=849;Name=lod=3743	NA	6p21.33	NA	NA	NA	NA	rs112107897	0.15	0.15	NA	NA	NA	NA	NA	NA	NA	0.13	0.1	0.2	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.234372	1.234372	NA	NA	NA	NA	0.116	NA	5
1152	6	57467279	57467279	T	C	intronic	PRIM2	NA	NA	NA	intronic	ENSG00000146143	NA	NA	NA	NA	NA	6p11.2	NA	NA	Name=40	NA	rs6459263	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.39929	NA	NA	NA	NA	NA	0.239	NA	5
1152	6	57467282	57467282	T	C	intronic	PRIM2	NA	NA	NA	intronic	ENSG00000146143	NA	NA	NA	NA	NA	6p11.2	NA	NA	Name=40	NA	rs6459264	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.165655	NA	NA	NA	NA	NA	0.239	NA	5
1152	6	57467303	57467303	A	G	intronic	PRIM2	NA	NA	NA	intronic	ENSG00000146143	NA	NA	NA	NA	NA	6p11.2	NA	NA	Name=40	NA	rs1022846	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.463835	NA	NA	NA	NA	NA	0.928	NA	5
1152	6	57472255	57472255	C	T	intronic	PRIM2	NA	NA	NA	intronic	ENSG00000146143	NA	NA	NA	Score=559;Name=lod=250	NA	6p11.2	NA	NA	NA	NA	rs9296900	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.759326	2.759326	NA	NA	NA	NA	0.5	NA	5
1152	6	57472299	57472299	A	G	intronic	PRIM2	NA	NA	NA	intronic	ENSG00000146143	NA	NA	NA	Score=304;Name=lod=23	NA	6p11.2	NA	NA	NA	NA	rs9396358	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.315165	3.315165	NA	NA	NA	NA	0.5	NA	5
1152	6	57472495	57472495	C	G	intronic	PRIM2	NA	NA	NA	intronic	ENSG00000146143	NA	NA	NA	NA	NA	6p11.2	NA	NA	Name=12	NA	rs62400219	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.396715	NA	NA	NA	NA	NA	0.007	NA	5
1152	6	57472533	57472533	T	C	intronic	PRIM2	NA	NA	NA	intronic	ENSG00000146143	NA	NA	NA	NA	NA	6p11.2	NA	NA	Name=12	NA	rs9367767	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.358758	1.358758	NA	NA	NA	NA	0.232	NA	5
1152	6	116774259	116774259	C	T	intergenic	DSE,FAM26F	dist=14817;dist=8274	NA	NA	ncRNA_exonic	ENSG00000217241	NA	NA	NA	Score=343;Name=lod=33	NA	6q22.1	NA	NA	NA	NA	rs62425221	NA	NA	0.154	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.665271	NA	NA	NA	NA	NA	0.283	NA	5
1152	6	116774264	116774264	T	C	intergenic	DSE,FAM26F	dist=14822;dist=8269	NA	NA	ncRNA_exonic	ENSG00000217241	NA	NA	NA	Score=343;Name=lod=33	NA	6q22.1	NA	NA	NA	NA	rs62425222	NA	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.856298	NA	NA	NA	NA	NA	0.29	NA	5
1152	6	116774406	116774406	G	C	intergenic	DSE,FAM26F	dist=14964;dist=8127	NA	NA	ncRNA_exonic	ENSG00000217241	NA	NA	NA	Score=558;Name=lod=246	NA	6q22.1	NA	NA	NA	NA	rs62425224	NA	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.635962	NA	NA	NA	NA	NA	0.014	NA	5
1152	6	132649738	132649738	A	G	intronic	MOXD1	NA	NA	NA	intronic	ENSG00000079931	NA	NA	NA	NA	NA	6q23.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.296245	NA	NA	NA	NA	NA	NA	NA	5
1152	6	168947643	168947643	C	G	intronic	SMOC2	NA	NA	NA	intronic	ENSG00000112562	NA	NA	NA	NA	NA	6q27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.934783	NA	NA	NA	NA	NA	NA	NA	5
1152	7	896098	896098	G	A	intronic	SUN1	NA	NA	NA	intronic	ENSG00000164828	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.070285	NA	NA	NA	NA	NA	NA	NA	5
1152	7	30094993	30094993	G	A	intronic	PLEKHA8	NA	NA	NA	intronic	ENSG00000106086	NA	NA	NA	NA	NA	7p14.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.806922	NA	NA	NA	NA	NA	NA	NA	5
1152	7	45015002	45015002	G	A	intronic	MYO1G	NA	NA	NA	intronic	ENSG00000136286	NA	NA	NA	NA	NA	7p13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.715669	NA	NA	NA	NA	NA	NA	NA	5
1152	7	65238611	65238611	A	G	intergenic	LOC441242,VKORC1L1	dist=2814;dist=99646	NA	NA	ncRNA_exonic	ENSG00000224316	NA	NA	NA	Score=243;Name=lod=13	NA	7q11.21	NA	NA	NA	NA	rs56236248	NA	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.195989	NA	NA	NA	NA	NA	NA	NA	5
1152	7	65253072	65253072	C	G	intergenic	LOC441242,VKORC1L1	dist=17275;dist=85185	NA	NA	ncRNA_exonic	ENSG00000224316	NA	NA	NA	Score=504;Name=lod=149	NA	7q11.21	NA	NA	NA	NA	rs4718280	0.35	0.35	0.304	NA	NA	NA	NA	NA	NA	0.4	0.49	0.31	0.13	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.553646	NA	NA	NA	NA	NA	0.254	NA	5
1152	7	87400135	87400135	T	C	intronic	RUNDC3B	NA	NA	NA	intronic	ENSG00000105784	NA	NA	NA	NA	NA	7q21.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.432159	NA	NA	NA	NA	NA	NA	NA	5
1152	7	100608662	100608662	A	G	intergenic	ACHE,MUC12	dist=115121;dist=4242	NA	NA	ncRNA_exonic	ENSG00000225946	NA	NA	NA	NA	NA	7q22.1	NA	Name=CTCF,Rad21	NA	NA	rs74929976	0.12	0.12	0.098	0.000199681	NA	NA	NA	0.0008	NA	0.13	NA	0.1	0.26	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.133137	NA	NA	NA	NA	NA	0.014	NA	5
1152	7	142460187	142460187	T	A	intronic	PRSS1	NA	NA	NA	intronic	ENSG00000204983	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.625564	NA	NA	NA	NA	NA	NA	NA	5
1152	7	142460226	142460226	C	T	intronic	PRSS1	NA	NA	NA	intronic	ENSG00000204983	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.036179	NA	NA	NA	NA	NA	NA	NA	5
1152	7	143815957	143815957	T	A	intergenic	OR2A2,OR2A14	dist=8325;dist=10249	NA	NA	ncRNA_exonic	ENSG00000239981	NA	NA	NA	Score=358;Name=lod=38	NA	7q35	NA	NA	NA	NA	rs77733382	NA	NA	0.188	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.390064	1.390064	NA	NA	NA	NA	NA	NA	5
1152	7	157413781	157413781	G	T	intronic	PTPRN2	NA	NA	NA	intronic	ENSG00000155093	NA	NA	NA	NA	NA	7q36.3	NA	NA	Name=9	NA	rs12672418	0.26	0.26	0.292	NA	NA	NA	NA	NA	NA	0.35	0.24	0.23	0.16	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.917283	NA	NA	NA	NA	NA	0.261	NA	5
1152	7	158066602	158066602	G	A	intronic	PTPRN2	NA	NA	NA	intronic	ENSG00000155093	NA	NA	NA	NA	NA	7q36.3	NA	NA	Name=3	NA	rs113375346	0.07	0.07	0.047	NA	NA	NA	NA	NA	NA	0.14	0.0017	0.06	0.05	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.158098	NA	NA	NA	NA	NA	0.014	NA	5
1152	8	6756714	6756714	T	C	intergenic	DEFB1,DEFA6	dist=21185;dist=25502	NA	NA	ncRNA_exonic	ENSG00000250752	NA	NA	NA	NA	NA	8p23.1	NA	Name=CTCF	NA	NA	rs13255674	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.010968	NA	NA	NA	NA	NA	0.348	NA	5
1152	8	6756763	6756763	A	C	intergenic	DEFB1,DEFA6	dist=21234;dist=25453	NA	NA	ncRNA_exonic	ENSG00000250752	NA	NA	NA	NA	NA	8p23.1	NA	Name=CTCF	NA	NA	rs9693852	0.45	0.45	0.636	NA	NA	NA	NA	NA	NA	0.57	0.51	0.45	0.18	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.027002	NA	NA	NA	NA	NA	NA	NA	5
1152	8	7276746	7276746	G	C	intergenic	DEFB4B,DEFB103B	dist=2392;dist=9670	NA	NA	ncRNA_exonic	ENSG00000255128	NA	NA	NA	Score=840;Name=lod=3441	NA	8p23.1	NA	NA	NA	NA	rs2737536	NA	NA	0.203	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.087	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.11291	NA	NA	NA	NA	NA	0.116	NA	5
1152	8	15800891	15800891	A	C	intergenic	TUSC3,MSR1	dist=176733;dist=164496	NA	NA	ncRNA_exonic	ENSG00000226836	NA	NA	NA	Score=697;Name=lod=903	NA	8p22	NA	NA	NA	NA	rs112527634	0.03	0.03	0.037	0.0365415	NA	NA	0.0072	0.1339	0.001	NA	NA	0.0028	0.14	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.020023	NA	0.01	NA	NA	NA	0.022	NA	5
1152	8	25225778	25225778	G	A	intronic	DOCK5	NA	NA	NA	intronic	ENSG00000147459	NA	NA	NA	NA	NA	8p21.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.34702	NA	NA	NA	NA	NA	NA	NA	5
1152	8	27287772	27287772	T	C	intronic	PTK2B	NA	NA	NA	intronic	ENSG00000120899	NA	NA	NA	NA	NA	8p21.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.65227	NA	NA	NA	NA	NA	NA	NA	5
1152	8	30207664	30207664	G	T	intergenic	MIR548O2,LOC100128750	dist=99451;dist=31971	NA	NA	ncRNA_exonic	ENSG00000254152	NA	NA	NA	Score=691;Name=lod=855	NA	8p12	NA	NA	NA	NA	rs199588989	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.049381	NA	NA	NA	NA	NA	NA	NA	5
1152	8	76476050	76476050	C	T	intronic	HNF4G	NA	NA	NA	intronic	ENSG00000164749	NA	NA	NA	NA	NA	8q21.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.559391	NA	NA	NA	NA	NA	NA	NA	5
1152	8	100454614	100454614	G	T	intronic	VPS13B	NA	NA	NA	intronic	ENSG00000132549	NA	NA	NA	NA	NA	8q22.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.753906	1.753906	NA	NA	NA	NA	NA	NA	5
1152	9	30689848	30689848	C	A	intergenic	LOC401497,ACO1	dist=281396;dist=1694753	NA	NA	ncRNA_exonic	ENSG00000215210	NA	NA	NA	Score=776;Name=lod=1901	NA	9p21.1	NA	NA	NA	NA	rs80282850	NA	NA	0.094	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.065	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.158208	NA	NA	NA	NA	NA	0.051	NA	5
1152	9	43400251	43400251	T	C	intergenic	LOC642929,SPATA31A6	dist=254767;dist=224251	NA	NA	ncRNA_exonic	ENSG00000229489	NA	NA	NA	Score=856;Name=lod=4027	NA	9p12	NA	NA	NA	NA	rs4961789	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.649979	1.649979	NA	NA	NA	NA	NA	NA	5
1152	9	43400841	43400841	A	T	intergenic	LOC642929,SPATA31A6	dist=255357;dist=223661	NA	NA	ncRNA_exonic	ENSG00000229489	NA	NA	NA	Score=856;Name=lod=4027	NA	9p12	NA	NA	NA	NA	rs12003334	NA	NA	0.279	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.85192	1.85192	NA	NA	NA	NA	0.022	NA	5
1152	9	66514338	66514338	G	A	intergenic	PTGER4P2-CDK2AP2P2,LOC286297	dist=11308;dist=503037	NA	NA	ncRNA_intronic	ENSG00000234665	NA	NA	NA	Score=645;Name=lod=555	NA	9q13	NA	NA	NA	NA	rs4244748	NA	NA	0.547	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.836107	NA	NA	NA	NA	NA	0.007	NA	5
1152	9	66517198	66517198	C	A	intergenic	PTGER4P2-CDK2AP2P2,LOC286297	dist=14168;dist=500177	NA	NA	ncRNA_exonic	ENSG00000227582	NA	NA	NA	Score=523;Name=lod=178	NA	9q13	NA	NA	NA	NA	rs10796698	NA	NA	0.396	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.032333	NA	NA	NA	NA	ID=COSN168555;OCCURENCE=1(large_intestine)	0.188	NA	5
1152	9	68357318	68357318	C	G	intergenic	ANKRD20A3,LOC642236	dist=387025;dist=70465	NA	NA	ncRNA_exonic	ENSG00000228656	NA	NA	NA	Score=648;Name=lod=573	NA	9q13	NA	NA	NA	NA	rs3124520	NA	NA	0.436	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.204558	NA	NA	NA	NA	NA	NA	NA	5
1152	9	68414063	68414063	T	C	intergenic	ANKRD20A3,LOC642236	dist=443770;dist=13720	NA	NA	ncRNA_exonic	ENSG00000232815	NA	NA	NA	NA	NA	9q13	NA	NA	Name=129	NA	rs74734751	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.130301	NA	NA	NA	NA	NA	0.42	NA	5
1152	9	68414094	68414094	A	G	intergenic	ANKRD20A3,LOC642236	dist=443801;dist=13689	NA	NA	ncRNA_exonic	ENSG00000232815	NA	NA	NA	NA	NA	9q13	NA	NA	Name=129	NA	rs74754654	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.257419	NA	NA	NA	NA	NA	0.696	NA	5
1152	9	69634630	69634630	A	T	intergenic	ANKRD20A4,LOC100133920	dist=209521;dist=16731	NA	NA	ncRNA_exonic	ENSG00000181997	NA	NA	NA	Score=539;Name=lod=207	NA	9q21.11	NA	NA	NA	NA	rs62551038	NA	NA	0.275	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.448561	NA	NA	NA	NA	NA	NA	NA	5
1152	9	138829940	138829940	C	A	intronic	UBAC1	NA	NA	NA	intronic	ENSG00000130560	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	NA	NA	NA	NA	0.00139776	NA	NA	0.0101	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.666802	NA	NA	NA	NA	NA	NA	NA	5
1152	9	140610972	140610972	G	A	intronic	EHMT1	NA	NA	NA	intronic	ENSG00000181090	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	NA	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.697681	NA	NA	NA	NA	NA	NA	NA	5
1152	10	5324820	5324820	G	A	intergenic	AKR1C4,UCN3	dist=63910;dist=82156	NA	NA	ncRNA_exonic	ENSG00000215267	NA	NA	NA	Score=462;Name=lod=101	NA	10p15.1	NA	NA	NA	NA	rs77540548	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.692023	NA	NA	NA	NA	NA	NA	NA	5
1152	10	5324827	5324827	T	C	intergenic	AKR1C4,UCN3	dist=63917;dist=82149	NA	NA	ncRNA_exonic	ENSG00000215267	NA	NA	NA	Score=462;Name=lod=101	NA	10p15.1	NA	NA	NA	NA	rs76090403	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.229001	NA	NA	NA	NA	NA	NA	NA	5
1152	10	8556787	8556787	G	T	intergenic	GATA3,NONE	dist=439623;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000213771	NA	NA	NA	Score=743;Name=lod=1398	NA	10p14	NA	NA	NA	NA	rs61829475	0.35	0.35	0.339	NA	NA	NA	NA	NA	NA	0.34	0.36	0.35	0.36	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.465059	NA	NA	NA	NA	NA	0.232	NA	5
1152	10	13199655	13199655	T	G	intergenic	OPTN,MCM10	dist=19379;dist=3899	NA	NA	ncRNA_exonic	ENSG00000203414	NA	NA	NA	Score=793;Name=lod=2221	NA	10p13	NA	NA	NA	NA	rs12356984	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.141545	NA	NA	NA	NA	NA	0.594	NA	5
1152	10	27415727	27415727	C	G	intronic	YME1L1	NA	NA	NA	intronic	ENSG00000136758	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.652695	1.652695	NA	NA	NA	NA	NA	NA	5
1152	10	38301222	38301222	T	C	intronic	ZNF33A	NA	NA	NA	intronic	ENSG00000189180	NA	NA	NA	NA	NA	10p11.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.693541	NA	NA	NA	NA	NA	NA	NA	5
1152	10	38897479	38897479	C	T	intergenic	LOC399744,ACTR3BP5	dist=156398;dist=92248	NA	NA	ncRNA_intronic	ENSG00000215151	NA	NA	NA	Score=660;Name=lod=641	NA	10p11.1	NA	NA	NA	NA	rs80166822	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.475113	NA	NA	NA	NA	NA	NA	NA	5
1152	10	38897539	38897539	T	C	intergenic	LOC399744,ACTR3BP5	dist=156458;dist=92188	NA	NA	ncRNA_exonic	ENSG00000215151	NA	NA	NA	Score=660;Name=lod=641	NA	10p11.1	NA	NA	NA	NA	rs76966281	NA	NA	0.493	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.207558	NA	NA	NA	NA	NA	NA	NA	5
1152	10	38897541	38897541	G	A	intergenic	LOC399744,ACTR3BP5	dist=156460;dist=92186	NA	NA	ncRNA_exonic	ENSG00000215151	NA	NA	NA	Score=660;Name=lod=641	NA	10p11.1	NA	NA	NA	NA	rs79482073	NA	NA	0.468	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.069986	NA	NA	NA	NA	NA	NA	NA	5
1152	10	38897584	38897584	G	A	intergenic	LOC399744,ACTR3BP5	dist=156503;dist=92143	NA	NA	ncRNA_exonic	ENSG00000215151	NA	NA	NA	Score=660;Name=lod=641	NA	10p11.1	NA	NA	NA	NA	rs61841293	NA	NA	0.618	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.06749	NA	NA	NA	NA	NA	NA	NA	5
1152	10	38897601	38897601	G	A	intergenic	LOC399744,ACTR3BP5	dist=156520;dist=92126	NA	NA	ncRNA_exonic	ENSG00000215151	NA	NA	NA	Score=660;Name=lod=641	NA	10p11.1	NA	NA	NA	NA	rs61841294	NA	NA	0.632	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.140752	NA	NA	NA	NA	NA	NA	NA	5
1152	10	38978124	38978124	A	C	intergenic	LOC399744,ACTR3BP5	dist=237043;dist=11603	NA	NA	ncRNA_intronic	ENSG00000233867	NA	NA	NA	Score=265;Name=lod=16	NA	10p11.1	NA	NA	NA	NA	rs78243982	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.147287	NA	NA	NA	NA	NA	NA	NA	5
1152	10	43318441	43318441	T	A	intronic	BMS1	NA	NA	NA	intronic	ENSG00000165733	NA	NA	NA	NA	NA	10q11.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.221967	NA	NA	NA	NA	NA	NA	NA	5
1152	10	95140933	95140933	C	G	intronic	MYOF	NA	NA	NA	intronic	ENSG00000138119	NA	NA	NA	NA	NA	10q23.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.669058	NA	NA	NA	NA	NA	NA	NA	5
1152	10	98709129	98709129	G	A	intronic	LCOR	NA	NA	NA	intronic	ENSG00000196233	NA	NA	NA	NA	NA	10q24.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.621467	NA	NA	NA	NA	NA	NA	NA	5
1152	10	104595306	104595306	C	A	intronic	CYP17A1	NA	NA	NA	intronic	ENSG00000148795	NA	NA	NA	NA	NA	10q24.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.550073	NA	NA	NA	NA	NA	NA	NA	5
1152	11	8751347	8751347	C	T	intronic	ST5	NA	NA	NA	intronic	ENSG00000166444	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.856144	NA	NA	NA	NA	NA	NA	NA	5
1152	11	27828248	27828248	T	A	intergenic	BDNF,KIF18A	dist=84643;dist=213915	NA	NA	ncRNA_exonic	ENSG00000177447	NA	NA	NA	Score=616;Name=lod=427	NA	11p14.1	NA	NA	NA	NA	rs78474033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.408701	NA	NA	NA	NA	NA	NA	NA	5
1152	11	55900296	55900296	G	T	intergenic	OR8H3,OR8J3	dist=9509;dist=3951	NA	NA	ncRNA_exonic	ENSG00000254848	NA	NA	NA	NA	NA	11q12.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.921158	NA	NA	NA	NA	NA	NA	NA	5
1152	11	67799457	67799457	C	T	intronic	NDUFS8	NA	NA	NA	intronic	ENSG00000110717	NA	NA	NA	NA	NA	11q13.2	NA	NA	NA	NA	NA	NA	NA	NA	0.000998403	NA	NA	NA	NA	0.0051	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.109765	NA	NA	NA	NA	NA	NA	NA	5
1152	11	70274961	70274961	G	A	intronic	CTTN	NA	NA	NA	intronic	ENSG00000085733	NA	NA	NA	NA	NA	11q13.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.941307	NA	NA	NA	NA	NA	NA	NA	5
1152	11	101637201	101637201	C	T	intergenic	TRPC6,ANGPTL5	dist=182542;dist=124204	NA	NA	ncRNA_exonic	ENSG00000254534	NA	NA	NA	NA	NA	11q22.1	NA	NA	NA	NA	NA	NA	NA	NA	0.000399361	NA	NA	NA	0.0015	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.687134	NA	NA	NA	NA	NA	NA	NA	5
1152	11	117095280	117095280	C	T	intronic	PCSK7	NA	NA	NA	intronic	ENSG00000160613	NA	NA	NA	NA	NA	11q23.3	NA	Name=GATA2_(CG2-96),USF-1,STAT2,eGFP-GATA2,TAL1_(SC-12984),Pol2(b),eGFP-JunD,Pol2,GABP,p300_(F-4),GATA-1,TAF1,ETS1	NA	NA	rs148066123	0.01	0.01	0.001	0.00239617	NA	NA	0.0043	0.0068	NA	NA	NA	0.01	0.02	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.224173	NA	NA	NA	NA	NA	0.007	NA	5
1152	12	9001645	9001645	G	A	intronic	A2ML1	NA	NA	NA	intronic	ENSG00000166535	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.809639	NA	NA	NA	NA	NA	NA	NA	5
1152	12	25956258	25956258	C	T	intergenic	IFLTD1,MIR4302	dist=154762;dist=70695	NA	NA	ncRNA_exonic	ENSG00000255725	NA	NA	NA	Score=289;Name=lod=20	NA	12p12.1	NA	NA	NA	NA	rs11048254	NA	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.166355	NA	NA	NA	NA	NA	0.413	NA	5
1152	12	25956542	25956542	C	A	intergenic	IFLTD1,MIR4302	dist=155046;dist=70411	NA	NA	ncRNA_exonic	ENSG00000255725	NA	NA	NA	Score=746;Name=lod=1438	NA	12p12.1	NA	NA	NA	NA	rs12308570	NA	NA	0.222	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.265137	NA	NA	NA	NA	NA	0.464	NA	5
1152	12	25956656	25956656	T	A	intergenic	IFLTD1,MIR4302	dist=155160;dist=70297	NA	NA	ncRNA_exonic	ENSG00000255725	NA	NA	NA	Score=746;Name=lod=1438	NA	12p12.1	NA	NA	NA	NA	rs56393669	NA	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.202557	NA	NA	NA	NA	NA	0.486	NA	5
1152	12	25956888	25956888	T	C	intergenic	IFLTD1,MIR4302	dist=155392;dist=70065	NA	NA	ncRNA_exonic	ENSG00000255725	NA	NA	NA	Score=746;Name=lod=1438	NA	12p12.1	NA	NA	NA	NA	rs3964194	NA	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.127644	NA	NA	NA	NA	NA	0.478	NA	5
1152	12	25956962	25956962	T	A	intergenic	IFLTD1,MIR4302	dist=155466;dist=69991	NA	NA	ncRNA_exonic	ENSG00000255725	NA	NA	NA	Score=746;Name=lod=1438	NA	12p12.1	NA	NA	NA	NA	rs3741543	NA	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.082142	NA	NA	NA	NA	NA	0.442	NA	5
1152	12	25957040	25957040	G	A	intergenic	IFLTD1,MIR4302	dist=155544;dist=69913	NA	NA	ncRNA_exonic	ENSG00000255725	NA	NA	NA	Score=746;Name=lod=1438	NA	12p12.1	NA	NA	NA	NA	rs73082398	NA	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.252024	NA	NA	NA	NA	NA	0.043	NA	5
1152	12	25957056	25957056	A	T	intergenic	IFLTD1,MIR4302	dist=155560;dist=69897	NA	NA	ncRNA_exonic	ENSG00000255725	NA	NA	NA	Score=746;Name=lod=1438	NA	12p12.1	NA	NA	NA	NA	rs75596968	NA	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.084709	NA	NA	NA	NA	NA	0.043	NA	5
1152	12	25957073	25957073	G	A	intergenic	IFLTD1,MIR4302	dist=155577;dist=69880	NA	NA	ncRNA_exonic	ENSG00000255725	NA	NA	NA	Score=746;Name=lod=1438	NA	12p12.1	NA	NA	NA	NA	rs80312392	NA	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.29043	NA	NA	NA	NA	NA	0.029	NA	5
1152	12	25957129	25957129	G	A	intergenic	IFLTD1,MIR4302	dist=155633;dist=69824	NA	NA	ncRNA_exonic	ENSG00000255725	NA	NA	NA	Score=746;Name=lod=1438	NA	12p12.1	NA	NA	NA	NA	rs76905446	NA	NA	0.115	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.000916	NA	NA	NA	NA	NA	0.457	NA	5
1152	12	25957196	25957196	A	G	intergenic	IFLTD1,MIR4302	dist=155700;dist=69757	NA	NA	ncRNA_exonic	ENSG00000255725	NA	NA	NA	Score=557;Name=lod=245	NA	12p12.1	NA	NA	NA	NA	rs74070838	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.208897	NA	NA	NA	NA	NA	0.493	NA	5
1152	12	25957329	25957329	C	G	intergenic	IFLTD1,MIR4302	dist=155833;dist=69624	NA	NA	ncRNA_exonic	ENSG00000255725	NA	NA	NA	NA	NA	12p12.1	NA	NA	Name=35	NA	rs73285040	NA	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.054	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.857707	NA	NA	NA	NA	NA	0.065	NA	5
1152	12	25957350	25957350	A	G	intergenic	IFLTD1,MIR4302	dist=155854;dist=69603	NA	NA	ncRNA_exonic	ENSG00000255725	NA	NA	NA	NA	NA	12p12.1	NA	NA	Name=35	NA	rs78631208	NA	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.313025	NA	NA	NA	NA	NA	0.058	NA	5
1152	12	54423391	54423391	G	A	intronic	HOXC4,HOXC6	NA	NA	NA	intronic	ENSG00000197757,ENSG00000198353	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.767822	1.767822	NA	NA	NA	NA	NA	NA	5
1152	12	54911451	54911451	C	T	intronic	NCKAP1L	NA	NA	NA	intronic	ENSG00000123338	NA	NA	NA	NA	NA	12q13.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.511308	2.511308	NA	NA	NA	NA	NA	NA	5
1152	12	55026930	55026930	C	G	intronic	LACRT	NA	NA	NA	intronic	ENSG00000135413	NA	NA	NA	NA	NA	12q13.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.15253	NA	NA	NA	NA	NA	NA	NA	5
1152	12	55807293	55807293	A	G	intergenic	OR6C65,OR6C76	dist=12042;dist=12745	NA	NA	ncRNA_exonic	ENSG00000179899	NA	NA	NA	Score=472;Name=lod=111	NA	12q13.2	NA	NA	NA	NA	rs3887805	NA	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.112265	NA	1	NA	NA	NA	0.449	NA	5
1152	12	58201044	58201044	A	G	intronic	AVIL	NA	NA	NA	intronic	ENSG00000123297,ENSG00000135407	NA	NA	NA	NA	NA	12q14.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.01092	NA	NA	NA	NA	NA	NA	NA	5
1152	12	120568611	120568611	C	T	intronic	GCN1L1	NA	NA	NA	intronic	ENSG00000089154	NA	NA	NA	NA	NA	12q24.23	NA	NA	NA	NA	NA	NA	NA	NA	0.00499201	NA	NA	NA	NA	0.0256	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.287895	2.287895	NA	NA	NA	NA	NA	NA	5
1152	13	36532154	36532154	T	C	intronic	DCLK1	NA	NA	NA	intronic	ENSG00000133083	NA	NA	NA	NA	NA	13q13.3	NA	Name=SUZ12,TR4	NA	NA	rs202088329	NA	NA	0.059	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.408683	NA	NA	NA	NA	NA	NA	NA	5
1152	14	19806874	19806874	A	T	intergenic	LINC00516,LINC00516	dist=125858;dist=87495	NA	NA	ncRNA_exonic	ENSG00000196143	NA	NA	NA	Score=309;Name=lod=24	NA	14q11.2	NA	NA	NA	NA	rs146461426	0.03	0.03	0.019	NA	NA	NA	NA	NA	NA	0.06	NA	0.03	0.0041	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.449175	NA	NA	NA	NA	NA	NA	NA	5
1152	14	20085023	20085023	C	A	intergenic	POTEM,OR11H2	dist=64751;dist=96040	NA	NA	ncRNA_exonic	ENSG00000258027	NA	NA	NA	Score=637;Name=lod=517	NA	14q11.2	NA	NA	NA	NA	rs61977220	NA	NA	0.725	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.819751	NA	NA	NA	NA	NA	0.616	NA	5
1152	14	20097348	20097348	C	T	intergenic	POTEM,OR11H2	dist=77076;dist=83715	NA	NA	ncRNA_exonic	ENSG00000257432	NA	NA	NA	Score=754;Name=lod=1548	NA	14q11.2	NA	NA	NA	NA	rs202060555	NA	NA	0.055	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.236995	NA	NA	NA	NA	NA	NA	NA	5
1152	14	20097349	20097349	A	G	intergenic	POTEM,OR11H2	dist=77077;dist=83714	NA	NA	ncRNA_exonic	ENSG00000257432	NA	NA	NA	Score=754;Name=lod=1548	NA	14q11.2	NA	NA	NA	NA	rs3000536	NA	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.054	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.14134	NA	NA	NA	NA	NA	0.043	NA	5
1152	14	20137564	20137564	G	A	intergenic	POTEM,OR11H2	dist=117292;dist=43499	NA	NA	ncRNA_exonic	ENSG00000257846	NA	NA	NA	Score=761;Name=lod=1650	NA	14q11.2	NA	NA	NA	NA	rs4399480	NA	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.201765	NA	NA	NA	NA	NA	0.022	NA	5
1152	14	20137587	20137587	G	A	intergenic	POTEM,OR11H2	dist=117315;dist=43476	NA	NA	ncRNA_exonic	ENSG00000257846	NA	NA	NA	Score=761;Name=lod=1650	NA	14q11.2	NA	NA	NA	NA	rs4399482	NA	NA	0.168	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.061701	NA	NA	NA	NA	NA	0.022	NA	5
1152	14	20137680	20137680	C	A	intergenic	POTEM,OR11H2	dist=117408;dist=43383	NA	NA	ncRNA_exonic	ENSG00000257846	NA	NA	NA	Score=761;Name=lod=1650	NA	14q11.2	NA	NA	NA	NA	rs67154051	NA	NA	0.137	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.257931	NA	NA	NA	NA	NA	0.007	NA	5
1152	14	20137730	20137730	C	G	intergenic	POTEM,OR11H2	dist=117458;dist=43333	NA	NA	ncRNA_exonic	ENSG00000257846	NA	NA	NA	Score=761;Name=lod=1650	NA	14q11.2	NA	NA	NA	NA	rs200112264	NA	NA	0.118	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.213303	NA	NA	NA	NA	NA	NA	NA	5
1152	14	22070146	22070146	C	T	intergenic	OR10G3,OR10G2	dist=31271;dist=31920	NA	NA	ncRNA_exonic	ENSG00000169202	NA	NA	NA	Score=343;Name=lod=33	NA	14q11.2	NA	NA	NA	NA	rs10134340	0.34	0.34	0.331	NA	NA	NA	NA	NA	NA	0.39	0.39	0.3	0.24	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.017526	NA	NA	NA	NA	NA	0.174	NA	5
1152	14	22070509	22070509	G	A	intergenic	OR10G3,OR10G2	dist=31634;dist=31557	NA	NA	ncRNA_exonic	ENSG00000169202	NA	NA	NA	Score=423;Name=lod=70	NA	14q11.2	NA	NA	NA	NA	rs11157069	0.4	0.4	0.38	NA	NA	NA	NA	NA	NA	0.46	0.39	0.48	0.27	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.396737	NA	NA	NA	NA	NA	0.304	NA	5
1152	14	57511484	57511484	T	C	intergenic	OTX2-AS1,EXOC5	dist=113934;dist=157710	NA	NA	ncRNA_exonic	ENSG00000259136	NA	NA	NA	NA	NA	14q22.3	NA	NA	Name=2	NA	rs28675893	0.34	0.34	0.267	NA	NA	NA	NA	NA	NA	0.39	0.33	0.47	0.19	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.04297	NA	NA	NA	NA	NA	0.319	NA	5
1152	14	60749314	60749314	A	T	intronic	PPM1A	NA	NA	NA	intronic	ENSG00000100614	NA	NA	NA	NA	NA	14q23.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.515562	NA	NA	NA	NA	NA	NA	NA	5
1152	14	99723614	99723614	C	T	intronic	BCL11B	NA	NA	NA	intronic	ENSG00000127152	NA	NA	NA	NA	NA	14q32.2	NA	NA	NA	NA	NA	NA	NA	NA	0.000199681	NA	NA	NA	NA	0.001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.383136	NA	NA	NA	NA	NA	NA	NA	5
1152	14	101011324	101011324	G	C	intronic	BEGAIN	NA	NA	NA	intronic	ENSG00000183092	NA	NA	NA	NA	NA	14q32.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.683759	NA	NA	NA	NA	NA	NA	NA	5
1152	14	105421745	105421745	C	T	intronic	AHNAK2	NA	NA	NA	intronic	ENSG00000185567	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.039685	NA	NA	NA	NA	NA	NA	NA	5
1152	14	106881425	106881425	A	G	intergenic	LINC00226,LINC00221	dist=136459;dist=57030	NA	NA	ncRNA_exonic	ENSG00000253467	NA	NA	NA	Score=417;Name=lod=66	NA	14q32.33	NA	NA	NA	NA	rs73368479	NA	NA	0.249	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.44585	NA	NA	NA	NA	NA	0.225	NA	5
1152	14	106919210	106919210	C	T	intergenic	LINC00226,LINC00221	dist=174244;dist=19245	NA	NA	ncRNA_exonic	ENSG00000254228	NA	NA	NA	Score=436;Name=lod=79	NA	14q32.33	NA	NA	NA	NA	rs76244773	0.27	0.27	0.255	NA	NA	NA	NA	NA	NA	0.27	0.16	0.21	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.184858	NA	NA	NA	NA	NA	0.254	NA	5
1152	14	106919228	106919228	C	T	intergenic	LINC00226,LINC00221	dist=174262;dist=19227	NA	NA	ncRNA_exonic	ENSG00000254228	NA	NA	NA	Score=278;Name=lod=18	NA	14q32.33	NA	NA	NA	NA	rs76359316	NA	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.349391	NA	NA	NA	NA	NA	0.268	NA	5
1152	14	106919234	106919234	G	T	intergenic	LINC00226,LINC00221	dist=174268;dist=19221	NA	NA	ncRNA_exonic	ENSG00000254228	NA	NA	NA	Score=278;Name=lod=18	NA	14q32.33	NA	NA	NA	NA	rs77084641	NA	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.23979	NA	NA	NA	NA	NA	0.268	NA	5
1152	14	106919405	106919405	T	C	intergenic	LINC00226,LINC00221	dist=174439;dist=19050	NA	NA	ncRNA_exonic	ENSG00000254228	NA	NA	NA	Score=300;Name=lod=22	NA	14q32.33	NA	NA	NA	NA	rs74093718	0.28	0.28	0.24	NA	NA	NA	NA	NA	NA	0.28	0.17	0.21	0.44	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.792111	NA	NA	NA	NA	NA	0.123	NA	5
1152	14	106919463	106919463	A	C	intergenic	LINC00226,LINC00221	dist=174497;dist=18992	NA	NA	ncRNA_exonic	ENSG00000254228	NA	NA	NA	Score=325;Name=lod=28	NA	14q32.33	NA	NA	NA	NA	rs11628768	0.27	0.27	0.262	NA	NA	NA	NA	NA	NA	0.28	0.17	0.22	0.44	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.31508	NA	NA	NA	NA	NA	0.029	NA	5
1152	14	107062209	107062209	G	T	intergenic	LINC00221,NONE	dist=110680;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000254395	NA	NA	NA	NA	NA	14q32.33	NA	Name=CTCF	NA	NA	rs1778	0.34	0.34	0.293	NA	NA	NA	NA	NA	NA	0.22	0.49	0.31	0.38	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.464805	NA	NA	NA	NA	NA	0.29	NA	5
1152	14	107087285	107087285	A	G	intergenic	LINC00221,NONE	dist=135756;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000253742	NA	NA	NA	Score=431;Name=lod=75	NA	14q32.33	NA	NA	NA	NA	rs61995829	NA	NA	0.188	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.473978	NA	NA	NA	NA	NA	NA	NA	5
1152	14	107087299	107087299	A	G	intergenic	LINC00221,NONE	dist=135770;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000253742	NA	NA	NA	Score=431;Name=lod=75	NA	14q32.33	NA	NA	NA	NA	rs61995830	NA	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.567667	NA	NA	NA	NA	NA	NA	NA	5
1152	14	107087376	107087376	G	A	intergenic	LINC00221,NONE	dist=135847;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000253742	NA	NA	NA	Score=440;Name=lod=82	NA	14q32.33	NA	NA	NA	NA	rs200283350	NA	NA	0.255	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.56595	NA	NA	NA	NA	NA	0.007	NA	5
1152	14	107099216	107099216	G	A	intergenic	LINC00221,NONE	dist=147687;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000253132	NA	NA	NA	Score=358;Name=lod=38	NA	14q32.33	NA	NA	NA	NA	rs2904630	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.113718	NA	NA	NA	NA	NA	0.036	NA	5
1152	15	20084176	20084176	C	T	intergenic	NONE,CHEK2P2	dist=NONE;dist=403821	NA	NA	ncRNA_exonic	ENSG00000215567	NA	NA	NA	Score=432;Name=lod=76	NA	15q11.1	NA	NA	NA	NA	rs7496199	NA	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.025281	NA	NA	NA	NA	NA	0.29	NA	5
1152	15	20172750	20172750	A	G	intergenic	NONE,CHEK2P2	dist=NONE;dist=315247	NA	NA	ncRNA_exonic	ENSG00000258706	NA	NA	NA	Score=674;Name=lod=733	NA	15q11.1	NA	NA	NA	NA	rs76520064	NA	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.42491	NA	NA	NA	NA	NA	0.007	NA	5
1152	15	20172769	20172769	A	G	intergenic	NONE,CHEK2P2	dist=NONE;dist=315228	NA	NA	ncRNA_exonic	ENSG00000258706	NA	NA	NA	Score=674;Name=lod=733	NA	15q11.1	NA	NA	NA	NA	rs75811638	NA	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.402773	NA	NA	NA	NA	NA	0.007	NA	5
1152	15	20173124	20173124	A	T	intergenic	NONE,CHEK2P2	dist=NONE;dist=314873	NA	NA	ncRNA_exonic	ENSG00000258706	NA	NA	NA	Score=580;Name=lod=304	NA	15q11.1	NA	NA	NA	NA	rs75992767	NA	NA	0.207	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.718273	NA	NA	NA	NA	NA	NA	NA	5
1152	15	20173160	20173160	A	G	intergenic	NONE,CHEK2P2	dist=NONE;dist=314837	NA	NA	ncRNA_exonic	ENSG00000258706	NA	NA	NA	Score=580;Name=lod=304	NA	15q11.1	NA	NA	NA	NA	rs77822217	NA	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.076	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.116813	NA	NA	NA	NA	NA	0.065	NA	5
1152	15	20173275	20173275	G	A	intergenic	NONE,CHEK2P2	dist=NONE;dist=314722	NA	NA	ncRNA_exonic	ENSG00000258706	NA	NA	NA	Score=619;Name=lod=437	NA	15q11.1	NA	NA	NA	NA	rs73389318	NA	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.229213	NA	NA	NA	NA	NA	NA	NA	5
1152	15	20462585	20462585	A	G	intergenic	NONE,CHEK2P2	dist=NONE;dist=25412	NA	NA	ncRNA_exonic	ENSG00000258628	NA	NA	NA	Score=607;Name=lod=392	NA	15q11.1	NA	NA	NA	NA	rs3901622	NA	NA	0.296	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.397114	NA	1	NA	NA	NA	0.377	NA	5
1152	15	20462613	20462613	G	C	intergenic	NONE,CHEK2P2	dist=NONE;dist=25384	NA	NA	ncRNA_exonic	ENSG00000258628	NA	NA	NA	Score=607;Name=lod=392	NA	15q11.1	NA	NA	NA	NA	rs28374902	NA	NA	0.128	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.076	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.240698	NA	0	NA	NA	NA	0.08	NA	5
1152	15	20481775	20481775	G	C	intergenic	NONE,CHEK2P2	dist=NONE;dist=6222	NA	NA	ncRNA_intronic	ENSG00000258628	NA	NA	NA	NA	NA	15q11.1	NA	Name=STAT3,CEBPB	NA	NA	rs2601541	NA	NA	0.501	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.914873	NA	NA	NA	NA	NA	0.558	NA	5
1152	15	20555267	20555267	T	G	intergenic	CHEK2P2,HERC2P3	dist=58456;dist=58383	NA	NA	ncRNA_intronic	ENSG00000258654	NA	NA	NA	NA	NA	15q11.1	NA	NA	Name=6	NA	rs1008718	NA	NA	0.302	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.044536	NA	NA	NA	NA	NA	0.254	NA	5
1152	15	20555524	20555524	T	C	intergenic	CHEK2P2,HERC2P3	dist=58713;dist=58126	NA	NA	ncRNA_intronic	ENSG00000258654	NA	NA	NA	NA	NA	15q11.1	NA	NA	Name=2	NA	rs8038853	NA	NA	0.121	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.423536	NA	NA	NA	NA	NA	0.348	NA	5
1152	15	23182197	23182197	C	T	intergenic	LOC283683,WHAMMP3	dist=66943;dist=5532	NA	NA	ncRNA_exonic	ENSG00000259174	NA	NA	NA	Score=656;Name=lod=616	NA	15q11.2	NA	NA	NA	NA	rs28561424	NA	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.056035	NA	NA	NA	NA	NA	0.138	NA	5
1152	15	28517240	28517240	A	G	intronic	HERC2	NA	NA	NA	intronic	ENSG00000128731	NA	NA	NA	NA	NA	15q13.1	NA	NA	Name=6	NA	rs79979051	NA	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.217769	NA	NA	NA	NA	NA	NA	NA	5
1152	15	63014487	63014487	T	G	intronic	TLN2	NA	NA	NA	intronic	ENSG00000171914	NA	NA	NA	NA	NA	15q22.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.405814	NA	NA	NA	NA	NA	NA	NA	5
1152	16	20838562	20838562	T	C	intronic	LOC81691	NA	NA	NA	intronic	ENSG00000005189,ENSG00000196678	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.052076	2.052076	NA	NA	NA	NA	NA	NA	5
1152	16	23721950	23721950	G	A	intronic	ERN2	NA	NA	NA	intronic	ENSG00000134398	NA	NA	NA	NA	NA	16p12.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.998353	NA	NA	NA	NA	NA	NA	NA	5
1152	16	32077740	32077740	A	G	intergenic	ZNF267,HERC2P4	dist=149111;dist=84869	NA	NA	ncRNA_intronic	ENSG00000261727	NA	NA	NA	NA	NA	16p11.2	NA	Name=CTCF_(C-20),Rad21,CTCF	NA	NA	rs2215566	NA	NA	0.349	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.054	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.585284	NA	NA	NA	NA	NA	0.036	NA	5
1152	16	32403532	32403532	T	A	intergenic	LOC390705,TP53TG3	dist=102230;dist=281317	NA	NA	ncRNA_exonic	ENSG00000260866	NA	NA	NA	Score=259;Name=lod=15	NA	16p11.2	NA	NA	NA	NA	rs75037542	NA	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.420681	NA	NA	NA	NA	NA	NA	NA	5
1152	16	32437093	32437093	A	G	intergenic	LOC390705,TP53TG3	dist=135791;dist=247756	NA	NA	ncRNA_intronic	ENSG00000260866	NA	NA	NA	Score=243;Name=lod=13	NA	16p11.2	NA	NA	NA	NA	rs2456358	NA	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.161779	NA	NA	NA	NA	NA	0.029	NA	5
1152	16	32486499	32486499	A	G	intergenic	LOC390705,TP53TG3	dist=185197;dist=198350	NA	NA	ncRNA_exonic	ENSG00000261233	NA	NA	NA	Score=659;Name=lod=638	NA	16p11.2	NA	NA	NA	NA	rs228788	0.45	0.45	0.57	NA	NA	NA	NA	NA	NA	0.45	0.42	0.44	0.48	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.217769	NA	1	NA	NA	NA	0.341	NA	5
1152	16	32626855	32626855	A	G	intergenic	LOC390705,TP53TG3	dist=325553;dist=57994	NA	NA	ncRNA_exonic	ENSG00000259966	NA	NA	NA	NA	NA	16p11.2	NA	Name=PU.1	NA	NA	rs28446891	NA	NA	0.463	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.308305	NA	NA	NA	NA	NA	0.442	NA	5
1152	16	33365573	33365573	G	C	intergenic	LOC390705,RNU6-76P	dist=66871;dist=97934	NA	NA	ncRNA_exonic	ENSG00000261405	NA	NA	NA	Score=289;Name=lod=20	NA	16p11.2	NA	NA	NA	NA	rs80015540	NA	NA	0.367	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.19519	NA	NA	NA	NA	NA	NA	NA	5
1152	16	33401573	33401573	G	A	intergenic	LOC390705,RNU6-76P	dist=102871;dist=61934	NA	NA	ncRNA_intronic	ENSG00000259882	NA	NA	NA	NA	NA	16p11.2	NA	NA	Name=9	NA	rs11490451	NA	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.744021	NA	NA	NA	NA	NA	0.007	NA	5
1152	16	33412844	33412844	A	T	intergenic	LOC390705,RNU6-76P	dist=114142;dist=50663	NA	NA	ncRNA_exonic	ENSG00000259882	NA	NA	NA	Score=369;Name=lod=42	NA	16p11.2	NA	NA	NA	NA	rs7403982	NA	NA	0.631	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.167117	NA	NA	NA	NA	NA	0.449	NA	5
1152	16	33414188	33414188	A	G	intergenic	LOC390705,RNU6-76P	dist=115486;dist=49319	NA	NA	ncRNA_exonic	ENSG00000259882	NA	NA	NA	Score=336;Name=lod=31	NA	16p11.2	NA	NA	NA	NA	rs7196786	NA	NA	0.606	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.416474	NA	NA	NA	NA	NA	0.326	NA	5
1152	16	33424787	33424787	C	T	intergenic	LOC390705,RNU6-76P	dist=126085;dist=38720	NA	NA	ncRNA_exonic	ENSG00000259882	NA	NA	NA	Score=609;Name=lod=398	NA	16p11.2	NA	NA	NA	NA	rs2632823	NA	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.478865	NA	NA	NA	NA	NA	0.123	NA	5
1152	16	33424917	33424917	A	C	intergenic	LOC390705,RNU6-76P	dist=126215;dist=38590	NA	NA	ncRNA_exonic	ENSG00000259882	NA	NA	NA	Score=609;Name=lod=398	NA	16p11.2	NA	NA	NA	NA	rs1906318	NA	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.296212	NA	NA	NA	NA	NA	0.174	NA	5
1152	16	33424950	33424950	C	T	intergenic	LOC390705,RNU6-76P	dist=126248;dist=38557	NA	NA	ncRNA_exonic	ENSG00000259882	NA	NA	NA	NA	NA	16p11.2	NA	Name=MafF_(M8194),MafK_(SC-477)	NA	NA	rs2927971	NA	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.108467	NA	NA	NA	NA	NA	0.08	NA	5
1152	16	33941931	33941931	T	A	intergenic	RNU6-76P,LINC00273	dist=378688;dist=19121	NA	NA	ncRNA_exonic	ENSG00000260087	NA	NA	NA	Score=637;Name=lod=518	NA	16p11.2	NA	NA	NA	NA	rs78963127	NA	NA	0.267	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.023229	NA	NA	NA	NA	NA	0.225	NA	5
1152	16	33965456	33965456	T	C	intergenic	LINC00273,UBE2MP1	dist=2953;dist=438346	NA	NA	ncRNA_exonic	ENSG00000200434	NA	NA	NA	Score=707;Name=lod=995	NA	16p11.2	NA	NA	NA	NA	rs79575365	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.076	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.022116	NA	NA	NA	NA	NA	0.138	NA	5
1152	16	70531754	70531754	T	G	intronic	COG4	NA	NA	NA	intronic	ENSG00000103051	NA	NA	NA	NA	NA	16q22.1	Score=812;Name=V$CDPCR3_01	NA	NA	NA	rs2303791	0.66	0.66	0.683	NA	NA	NA	NA	NA	NA	0.48	0.72	0.51	0.97	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.009475	NA	NA	NA	NA	NA	0.717	NA	5
1152	16	89703542	89703542	G	A	intronic	DPEP1	NA	NA	NA	intronic	ENSG00000015413	NA	NA	NA	NA	NA	16q24.3	NA	NA	NA	NA	NA	NA	NA	NA	0.000199681	NA	NA	0.0014	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.451865	1.451865	NA	NA	NA	NA	NA	NA	5
1152	17	69631	69631	C	T	intronic	RPH3AL	NA	NA	NA	intronic	ENSG00000181031	NA	NA	NA	NA	NA	17p13.3	Score=907;Name=V$USF_Q6	NA	NA	NA	rs62059561	0.24	0.24	0.239	NA	NA	NA	NA	NA	NA	0.33	0.26	0.21	0.08	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.138662	NA	NA	NA	NA	NA	0.362	NA	5
1152	17	15673727	15673727	C	G	intergenic	CDRT15P2,MEIS3P1	dist=4724;dist=16437	NA	NA	ncRNA_exonic	ENSG00000235430	NA	NA	NA	Score=799;Name=lod=2355	NA	17p12	NA	NA	NA	NA	rs659945	NA	NA	0.226	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.127448	NA	NA	NA	NA	NA	0.014	NA	5
1152	17	15673779	15673779	T	C	intergenic	CDRT15P2,MEIS3P1	dist=4776;dist=16385	NA	NA	ncRNA_exonic	ENSG00000235430	NA	NA	NA	Score=799;Name=lod=2355	NA	17p12	NA	NA	NA	NA	rs565772	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.499169	NA	NA	NA	NA	NA	0.036	NA	5
1152	17	18541857	18541857	C	G	intronic	TBC1D28	NA	NA	NA	intronic	ENSG00000189375	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.903395	NA	NA	NA	NA	NA	NA	NA	5
1152	17	21202400	21202400	C	T	intronic	MAP2K3	NA	NA	NA	intronic	ENSG00000034152	NA	NA	NA	Score=265;Name=lod=16	NA	17p11.2	NA	NA	NA	NA	rs72831543	0.15	0.15	0.107	NA	NA	NA	NA	NA	NA	0.16	0.17	0.12	0.12	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.717503	NA	NA	NA	NA	NA	0.022	NA	5
1152	17	21207992	21207992	G	A	intronic	MAP2K3	NA	NA	NA	intronic	ENSG00000034152	NA	NA	NA	NA	NA	17p11.2	NA	Name=ZNF274	NA	NA	rs9893917	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.500673	NA	NA	NA	NA	NA	0.362	NA	5
1152	17	21208187	21208187	C	T	intronic	MAP2K3	NA	NA	NA	intronic	ENSG00000034152	NA	NA	NA	NA	NA	17p11.2	NA	Name=ZNF274	NA	NA	rs7209543	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.660432	NA	NA	NA	NA	NA	0.362	NA	5
1152	17	21208292	21208292	T	C	intronic	MAP2K3	NA	NA	NA	intronic	ENSG00000034152	NA	NA	NA	NA	NA	17p11.2	NA	Name=ZNF274	NA	NA	rs7214432	NA	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.370787	NA	NA	NA	NA	NA	0.399	NA	5
1152	17	21215682	21215682	G	A	intronic	MAP2K3	NA	NA	NA	intronic	ENSG00000034152	NA	NA	NA	NA	NA	17p11.2	NA	NA	Name=4	NA	rs73302038	NA	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.127355	NA	NA	NA	NA	NA	0.5	NA	5
1152	17	21217290	21217290	G	A	intronic	MAP2K3	NA	NA	NA	intronic	ENSG00000034152	NA	NA	NA	NA	NA	17p11.2	NA	NA	Name=5	NA	rs1673837	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.272378	NA	NA	NA	NA	NA	0.493	NA	5
1152	17	21544462	21544462	G	A	intergenic	C17orf51,FAM27L	dist=89521;dist=280908	NA	NA	ncRNA_exonic	ENSG00000265019	NA	NA	NA	Score=626;Name=lod=468	NA	17p11.2	NA	NA	NA	NA	rs9285742	NA	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.352833	NA	0.13	NA	NA	NA	NA	NA	5
1152	17	37571160	37571160	A	T	intronic	MED1	NA	NA	NA	intronic	ENSG00000125686	NA	NA	NA	NA	NA	17q12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.436865	NA	NA	NA	NA	NA	NA	NA	5
1152	17	45740341	45740341	T	C	intronic	KPNB1	NA	NA	NA	intronic	ENSG00000108424	NA	NA	NA	NA	NA	17q21.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.627776	NA	NA	NA	NA	NA	NA	NA	5
1152	17	58258107	58258107	G	C	intronic	USP32	NA	NA	NA	intronic	ENSG00000170832	NA	NA	NA	NA	NA	17q23.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.377762	NA	NA	NA	NA	NA	NA	NA	5
1152	17	76099729	76099729	T	C	intronic	TNRC6C	NA	NA	NA	intronic	ENSG00000078687	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.578014	NA	NA	NA	NA	NA	NA	NA	5
1152	18	5433849	5433849	G	A	intronic	EPB41L3	NA	NA	NA	intronic	ENSG00000082397	NA	NA	NA	NA	NA	18p11.31	NA	NA	NA	NA	NA	NA	NA	NA	0.000199681	NA	NA	NA	NA	0.001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.405976	NA	NA	NA	NA	NA	NA	NA	5
1152	18	47022925	47022925	T	A	intergenic	RPL17-C18orf32,LIPG	dist=3990;dist=65502	NA	NA	ncRNA_exonic	ENSG00000265182	NA	NA	NA	Score=513;Name=lod=162	NA	18q21.1	NA	NA	NA	NA	rs9958322	0.01	0.01	NA	0.0195687	NA	NA	0.0101	0.0688	NA	NA	NA	0.01	0.05	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.088164	NA	NA	NA	NA	NA	NA	NA	5
1152	18	47109825	47109825	T	C	intronic	LIPG	NA	NA	NA	intronic	ENSG00000101670	NA	NA	NA	NA	NA	18q21.1	NA	NA	NA	NA	NA	NA	NA	NA	0.000798722	NA	NA	NA	0.003	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.350136	1.350136	NA	NA	NA	NA	NA	NA	5
1152	18	71822279	71822279	A	T	intronic	TIMM21	NA	NA	NA	intronic	ENSG00000075336	NA	NA	NA	NA	NA	18q22.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.367625	NA	NA	NA	NA	NA	NA	NA	5
1152	19	3728504	3728504	G	A	intronic	TJP3	NA	NA	NA	intronic	ENSG00000105289	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.360581	NA	NA	NA	NA	NA	NA	NA	5
1152	19	9020654	9020654	G	A	intronic	MUC16	NA	NA	NA	intronic	ENSG00000181143	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	NA	NA	NA	NA	0.000199681	NA	NA	NA	0.0008	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.100196	NA	NA	NA	NA	NA	NA	NA	5
1152	19	9020952	9020952	T	C	intronic	MUC16	NA	NA	NA	intronic	ENSG00000181143	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	NA	NA	NA	NA	0.00119808	NA	NA	NA	0.0045	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.358904	NA	NA	NA	NA	NA	NA	NA	5
1152	19	15473141	15473141	G	T	intronic	AKAP8	NA	NA	NA	intronic	ENSG00000105127	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.65859	NA	NA	NA	NA	NA	NA	NA	5
1152	19	19414379	19414379	C	A	intronic	SUGP1	NA	NA	NA	intronic	ENSG00000105705	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	NA	0.01	0.01	NA	NA	NA	NA	NA	NA	NA	0.02	NA	0.01	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.184034	NA	NA	NA	NA	NA	NA	NA	5
1152	19	21751895	21751895	G	A	intergenic	ZNF429,ZNF100	dist=30816;dist=154948	NA	NA	ncRNA_intronic	ENSG00000268081	NA	NA	NA	NA	NA	19p12	NA	Name=Pol2	NA	NA	rs76475343	NA	NA	0.245	0.000199681	NA	0.001	NA	NA	NA	NA	NA	NA	NA	NA	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.414078	NA	NA	NA	NA	NA	0.058	NA	5
1152	19	42838072	42838072	C	T	intronic	MEGF8	NA	NA	NA	intronic	ENSG00000105429	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.031708	NA	NA	NA	NA	NA	NA	NA	5
1152	19	50665973	50665973	A	C	intronic	IZUMO2	NA	NA	NA	intronic	ENSG00000161652	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.256451	NA	NA	NA	NA	NA	NA	NA	5
1152	19	52219428	52219428	T	C	intronic	HAS1	NA	NA	NA	intronic	ENSG00000105509	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.359183	2.359183	NA	NA	NA	NA	NA	NA	5
1152	20	25206101	25206101	G	C	intronic	ENTPD6	NA	NA	NA	intronic	ENSG00000197586	NA	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.452574	NA	NA	NA	NA	NA	NA	NA	5
1152	20	25900135	25900135	C	A	intergenic	FAM182B,LOC100134868	dist=118208;dist=90300	NA	NA	ncRNA_exonic	ENSG00000228593	NA	NA	NA	Score=556;Name=lod=243	NA	20p11.1	NA	NA	NA	NA	rs11699441	NA	NA	0.481	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.809443	NA	NA	NA	NA	NA	NA	NA	5
1152	20	29449509	29449509	G	A	intergenic	NONE,FRG1B	dist=NONE;dist=162370	NA	NA	ncRNA_exonic	ENSG00000204555	NA	NA	NA	Score=454;Name=lod=93	NA	20q11.21	NA	NA	NA	NA	rs4010662	NA	NA	0.401	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.587362	NA	NA	NA	NA	NA	NA	NA	5
1152	20	30730987	30730987	C	T	intronic	TM9SF4	NA	NA	NA	intronic	ENSG00000101337	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	NA	NA	NA	NA	0.000599042	NA	NA	0.0043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.113688	NA	NA	NA	NA	NA	NA	NA	5
1152	20	30897493	30897493	A	G	intronic	KIF3B	NA	NA	NA	intronic	ENSG00000101350	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	NA	NA	NA	NA	0.000998403	NA	NA	0.0014	0.0008	0.0031	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.407337	NA	NA	NA	NA	NA	NA	NA	5
1152	20	34766683	34766683	G	T	intronic	EPB41L1	NA	NA	NA	intronic	ENSG00000088367	NA	NA	NA	NA	NA	20q11.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.911518	NA	NA	NA	NA	NA	NA	NA	5
1152	20	35769500	35769500	T	C	intronic	MROH8	NA	NA	NA	intronic	ENSG00000101353	NA	NA	NA	NA	NA	20q11.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.337032	NA	NA	NA	NA	NA	NA	NA	5
1152	20	35776118	35776118	G	T	intronic	MROH8	NA	NA	NA	intronic	ENSG00000101353	NA	NA	NA	NA	NA	20q11.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.058767	3.058767	NA	NA	NA	NA	NA	NA	5
1152	21	10899173	10899173	T	C	intergenic	TEKT4P2,TPTE	dist=930580;dist=7570	NA	NA	ncRNA_exonic	ENSG00000223925	NA	NA	NA	Score=574;Name=lod=288	NA	21p11.2	NA	NA	NA	NA	rs616160	NA	NA	0.572	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.1323	NA	NA	NA	NA	NA	0.478	NA	5
1152	21	10934193	10934193	A	G	intronic	TPTE	NA	NA	NA	intronic	ENSG00000166157	NA	NA	NA	NA	NA	21p11.1	Score=777;Name=V$MEF2_02	NA	NA	NA	rs8132116	NA	NA	0.138	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.270342	NA	NA	NA	NA	NA	0.159	NA	5
1152	21	11154412	11154412	A	G	intergenic	BAGE,NONE	dist=55475;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000231962	NA	NA	NA	Score=343;Name=lod=33	NA	21p11.1	NA	NA	NA	NA	rs3879425	NA	NA	0.362	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.326961	NA	NA	NA	NA	NA	0.384	NA	5
1152	21	43796099	43796099	C	G	intronic	TMPRSS3	NA	NA	NA	intronic	ENSG00000160183	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.877637	NA	NA	NA	NA	NA	NA	NA	5
1152	22	16349564	16349564	G	A	intergenic	POTEH,OR11H1	dist=61627;dist=99260	NA	NA	ncRNA_exonic	ENSG00000224435	NA	NA	NA	Score=674;Name=lod=733	NA	22q11.1	NA	NA	NA	NA	rs2158040	NA	NA	0.124	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.843434	NA	NA	NA	NA	NA	NA	NA	5
1152	22	16350245	16350245	C	A	intergenic	POTEH,OR11H1	dist=62308;dist=98579	NA	NA	ncRNA_splicing	ENSG00000224435	ENST00000426025:exon5:c.602-2C>A	NA	NA	Score=541;Name=lod=210	NA	22q11.1	NA	NA	NA	NA	rs2905295	NA	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.788036	NA	NA	NA	NA	NA	0.007	NA	5
1152	22	16414176	16414176	G	C	intergenic	POTEH,OR11H1	dist=126239;dist=34648	NA	NA	ncRNA_exonic	ENSG00000215268	NA	NA	NA	Score=536;Name=lod=202	NA	22q11.1	NA	NA	NA	NA	rs11704016	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.360257	NA	NA	NA	NA	NA	NA	NA	5
1152	22	31332817	31332817	T	A	intronic	MORC2	NA	NA	NA	intronic	ENSG00000133422	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.075538	NA	NA	NA	NA	NA	NA	NA	5
1152	22	41236564	41236564	C	G	intronic	ST13	NA	NA	NA	intronic	ENSG00000100380	NA	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	NA	NA	NA	NA	0.000199681	NA	NA	0.0014	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.68262	NA	NA	NA	NA	NA	NA	NA	5
1152	X	1414496	1414496	A	T	intronic	CSF2RA	NA	NA	NA	intronic	ENSG00000198223	NA	NA	NA	Score=391;Name=lod=52	NA	Xp22.33	NA	NA	NA	NA	rs28510573	0.17	0.17	NA	NA	NA	NA	NA	NA	NA	0.24	0.19	0.16	0.03	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.510207	NA	NA	NA	NA	NA	0.029	NA	5
1152	X	79829049	79829049	C	T	intergenic	FAM46D,BRWD3	dist=128239;dist=95938	NA	NA	ncRNA_exonic	ENSG00000228612	NA	NA	NA	Score=405;Name=lod=59	NA	Xq21.1	NA	NA	NA	NA	rs1848539	0.13	0.13	0.14865	NA	NA	NA	NA	NA	NA	0.14	0.25	0.07	0.03	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.838664	NA	NA	NA	NA	NA	0.08	NA	5
1152	X	99410964	99410964	C	T	intergenic	XRCC6P5,PCDH19	dist=216123;dist=135678	NA	NA	ncRNA_exonic	ENSG00000230592	NA	NA	NA	Score=746;Name=lod=1441	NA	Xq22.1	NA	NA	NA	NA	rs1962318	0.99	0.99	0.98331	NA	NA	NA	NA	NA	NA	1	1	1	0.94	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.577427	2.577427	NA	NA	NA	NA	0.594	NA	5
1152	X	100166362	100166362	T	C	intergenic	NOX1,XKRX	dist=37028;dist=2069	NA	NA	ncRNA_exonic	ENSG00000179031	NA	NA	NA	Score=784;Name=lod=2048	NA	Xq22.1	NA	NA	NA	NA	rs191409754	0.0018	0.0018	NA	NA	NA	NA	NA	NA	NA	0.01	NA	NA	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.725141	NA	NA	NA	NA	NA	NA	NA	5
1152	X	100793995	100793995	G	C	intergenic	ARMCX4,ARMCX1	dist=43197;dist=11519	NA	NA	ncRNA_exonic	ENSG00000237682	NA	NA	NA	Score=731;Name=lod=1247	NA	Xq22.1	NA	NA	NA	NA	rs6523510	0.64	0.64	0.65024	NA	NA	NA	NA	NA	NA	0.68	0.45	0.63	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.111527	NA	NA	NA	NA	NA	0.507	NA	5
1152	X	122696563	122696563	C	T	intergenic	GRIA3,THOC2	dist=71797;dist=37849	NA	NA	ncRNA_exonic	ENSG00000228466	NA	NA	NA	Score=869;Name=lod=4537	NA	Xq25	NA	NA	NA	NA	rs4825872	0.42	0.42	0.438	NA	NA	NA	NA	NA	NA	0.33	0.69	0.27	0.34	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.012533	NA	NA	NA	NA	NA	0.246	NA	5
1152	X	150162235	150162235	C	T	intergenic	HMGB3,MIR4330	dist=2987;dist=174459	NA	NA	ncRNA_exonic	ENSG00000230508	NA	NA	NA	Score=478;Name=lod=117	NA	Xq28	NA	NA	NA	NA	rs6627833	0.2	0.2	0.16932	NA	NA	NA	NA	NA	NA	0.22	0.25	0.23	0.07	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.274	NA	NA	NA	NA	NA	0.116	NA	5
1152	X	155215244	155215244	G	T	intergenic	VAMP7,IL9R	dist=41811;dist=12002	NA	NA	ncRNA_exonic	ENSG00000223484	NA	NA	NA	Score=745;Name=lod=1423	NA	Xq28	NA	NA	NA	NA	rs56006417	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.142542	NA	NA	NA	NA	NA	0.181	NA	5
1152	X	155215373	155215373	C	T	intergenic	VAMP7,IL9R	dist=41940;dist=11873	NA	NA	ncRNA_exonic	ENSG00000223484	NA	NA	NA	Score=745;Name=lod=1423	NA	Xq28	NA	NA	NA	NA	rs56096248	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.534553	NA	NA	NA	NA	NA	0.268	NA	5
1152	X	155215551	155215551	G	A	intergenic	VAMP7,IL9R	dist=42118;dist=11695	NA	NA	ncRNA_exonic	ENSG00000223484	NA	NA	NA	Score=745;Name=lod=1423	NA	Xq28	NA	NA	NA	NA	rs4013617	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.295748	1.295748	NA	NA	NA	NA	0.493	NA	5
1152	Y	3720321	3720321	A	G	intergenic	TGIF2LY,PCDH11Y	dist=272239;dist=1147946	NA	NA	ncRNA_exonic	ENSG00000218410	NA	NA	NA	NA	NA	Yp11.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.630442	NA	NA	NA	NA	NA	NA	NA	5
1152	Y	10011498	10011498	G	C	intergenic	TTTY23B,NONE	dist=261927;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000226061	NA	NA	NA	Score=589;Name=lod=331	NA	Yp11.2	NA	NA	NA	NA	rs2313792	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.925744	NA	NA	NA	NA	NA	0.007	NA	5
1152	Y	10011502	10011502	A	G	intergenic	TTTY23B,NONE	dist=261931;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000226061	NA	NA	NA	Score=589;Name=lod=331	NA	Yp11.2	NA	NA	NA	NA	rs451993	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.609859	NA	NA	NA	NA	NA	NA	NA	5
1152	Y	10029308	10029308	A	T	intergenic	TTTY23B,NONE	dist=279737;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000237447	NA	NA	NA	Score=836;Name=lod=3342	NA	Yp11.2	NA	NA	NA	NA	rs75275679	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.098348	NA	NA	NA	NA	NA	NA	NA	5
1152	Y	10029322	10029322	T	C	intergenic	TTTY23B,NONE	dist=279751;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000237447	NA	NA	NA	Score=836;Name=lod=3342	NA	Yp11.2	NA	NA	NA	NA	rs75297592	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.015233	NA	NA	NA	NA	NA	0.232	NA	5
1152	Y	13470805	13470805	G	A	intergenic	NONE,GYG2P1	dist=NONE;dist=1047110	NA	NA	ncRNA_exonic	ENSG00000259154	NA	NA	NA	NA	NA	Yq11.21	NA	NA	Name=32	NA	rs80192207	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.644003	NA	NA	NA	NA	NA	NA	NA	5
1152	Y	13488480	13488480	G	A	intergenic	NONE,GYG2P1	dist=NONE;dist=1029435	NA	NA	ncRNA_exonic	ENSG00000258991	NA	NA	NA	NA	NA	Yq11.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.541193	NA	NA	NA	NA	NA	NA	NA	5
1152	Y	14107314	14107314	T	C	intergenic	NONE,GYG2P1	dist=NONE;dist=410601	NA	NA	ncRNA_exonic	ENSG00000235649	NA	NA	NA	NA	NA	Yq11.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.913872	NA	NA	NA	NA	NA	NA	NA	5
1152	10	33113432	33113432	T	C	intronic	C10orf68	NA	NA	NA	intronic	ENSG00000150076	NA	NA	NA	NA	NA	10p11.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000008342	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.265397	NA	NA	NA	NA	NA	NA	NA	4.9999917
1152	19	39906947	39906947	G	A	intronic	PLEKHG2	NA	NA	NA	intronic	ENSG00000090924	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0000083	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.6914	NA	NA	NA	NA	NA	NA	NA	4.9999917
1152	16	67688818	67688818	C	A	intronic	RLTPR	NA	NA	NA	intronic	ENSG00000159753	NA	NA	NA	NA	NA	16q22.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000008377	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.582921	NA	NA	NA	NA	NA	NA	NA	4.9999916
1152	15	76079105	76079105	T	C	intergenic	MIR4313,UBE2Q2	dist=24449;dist=56517	NA	NA	ncRNA_intronic	ENSG00000187812	NA	NA	NA	NA	NA	15q24.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000008487	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.665162	NA	NA	NA	NA	NA	NA	NA	4.9999915
1152	19	55776803	55776803	C	T	intronic	HSPBP1	NA	NA	NA	intronic	ENSG00000133265	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000008561	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.10593	NA	NA	NA	NA	NA	NA	NA	4.9999914
1152	7	103029574	103029574	C	T	intronic	SLC26A5	NA	NA	NA	intronic	ENSG00000170615	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000009068	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.040617	NA	NA	NA	NA	NA	NA	NA	4.9999909
1152	19	1074324	1074324	C	A	intronic	HMHA1	NA	NA	NA	intronic	ENSG00000180448	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000009932	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.846844	2.846844	NA	NA	NA	NA	NA	NA	4.9999901
1152	17	34308362	34308362	C	T	intronic	CCL16	NA	NA	NA	intronic	ENSG00000161573	NA	NA	NA	NA	NA	17q12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00001258	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.414337	1.414337	NA	NA	NA	NA	NA	NA	4.9999874
1152	5	72189540	72189540	T	C	intronic	TNPO1	NA	NA	NA	intronic	ENSG00000083312	NA	NA	NA	NA	NA	5q13.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00001651	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.407955	3.407955	NA	NA	NA	NA	NA	NA	4.9999835
1152	8	22272263	22272263	A	G	intronic	SLC39A14	NA	NA	NA	intronic	ENSG00000104635	NA	NA	NA	NA	NA	8p21.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00001654	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.453494	NA	NA	NA	NA	NA	NA	NA	4.9999835
1152	15	72502009	72502009	C	A	intronic	PKM	NA	NA	NA	intronic	ENSG00000067225	NA	NA	NA	NA	NA	15q23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00001647	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.626906	1.626906	NA	NA	NA	NA	NA	NA	4.9999835
1152	11	46911117	46911117	G	A	intronic	LRP4	NA	NA	NA	intronic	ENSG00000134569	NA	NA	NA	NA	NA	11p11.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00001662	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.623721	NA	NA	NA	NA	NA	NA	NA	4.9999834
1152	10	114203234	114203234	G	T	intronic	ZDHHC6	NA	NA	NA	intronic	ENSG00000023041	NA	NA	NA	NA	NA	10q25.2	NA	NA	NA	NA	NA	NA	NA	NA	0.000199681	NA	NA	0.0014	NA	NA	NA	NA	NA	NA	0.00002494	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.269057	NA	NA	NA	NA	NA	NA	NA	4.9999751
1152	9	35555730	35555730	G	A	intronic	RUSC2	NA	NA	NA	intronic	ENSG00000198853	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	NA	NA	NA	NA	0.000199681	NA	0.001	NA	NA	NA	NA	NA	NA	NA	0.00002679	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.72621	NA	NA	NA	NA	NA	NA	NA	4.9999732
1152	8	22390576	22390576	C	G	intronic	PPP3CC	NA	NA	NA	intronic	ENSG00000120910	NA	NA	NA	NA	NA	8p21.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00003588	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.609072	NA	NA	NA	NA	NA	NA	NA	4.9999641
1152	9	116858312	116858312	G	A	intronic	KIF12	NA	NA	NA	intronic	ENSG00000136883	NA	NA	NA	NA	NA	9q32	NA	Name=CTCF	NA	NA	rs188701783	0.0005	0.0005	NA	0.000199681	NA	NA	0.0014	NA	NA	NA	NA	0.0028	NA	0.00003653	0.0028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.036685	NA	NA	NA	NA	NA	NA	NA	4.9999635
1152	19	7594101	7594101	C	T	intronic	MCOLN1	NA	NA	NA	intronic	ENSG00000090674	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00004145	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.006925	NA	NA	NA	NA	NA	NA	NA	4.9999586
1152	5	137846922	137846922	T	C	intronic	ETF1	NA	NA	NA	intronic	ENSG00000120705	NA	NA	NA	NA	NA	5q31.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0000499	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.969391	NA	NA	NA	NA	NA	NA	NA	4.9999501
1152	8	2949013	2949013	T	C	intronic	CSMD1	NA	NA	NA	intronic	ENSG00000183117	NA	NA	NA	NA	NA	8p23.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00005361	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.391006	NA	NA	NA	NA	NA	NA	NA	4.9999464
1152	1	32207340	32207340	G	A	intronic	BAI2	NA	NA	NA	intronic	ENSG00000121753	NA	NA	NA	NA	NA	1p35.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00005886	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.41814	NA	NA	NA	NA	NA	NA	NA	4.9999411
1152	15	30065566	30065566	G	A	intronic	TJP1	NA	NA	NA	intronic	ENSG00000104067	NA	NA	NA	NA	NA	15q13.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0000666	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.045513	NA	NA	NA	NA	NA	NA	NA	4.9999334
1152	9	131772933	131772933	C	T	intronic	SH3GLB2	NA	NA	NA	intronic	ENSG00000148341	NA	NA	NA	NA	NA	9q34.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00009109	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.314483	4.314483	NA	NA	NA	NA	NA	NA	4.9999089
1152	9	136245998	136245998	G	A	intronic	C9orf96	NA	NA	NA	intronic	ENSG00000198870	NA	NA	NA	Score=352;Name=lod=36	NA	9q34.2	NA	NA	NA	NA	rs376960568	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0000169	0.0001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.229729	NA	NA	0.000116	0	NA	NA	NA	4.9998671
1152	2	238435951	238435951	T	C	intronic	MLPH	NA	NA	NA	intronic	ENSG00000115648	NA	NA	NA	NA	NA	2q37.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0002	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.087569	NA	NA	NA	NA	NA	NA	NA	4.9998
1152	6	109954383	109954383	T	C	intronic	AK9	NA	NA	NA	intronic	ENSG00000155085	NA	NA	NA	Score=435;Name=lod=78	NA	6q21	NA	NA	NA	NA	rs201757833	NA	NA	NA	0.000399361	NA	NA	NA	NA	0.002	NA	NA	NA	NA	0.0002	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.23347	1.23347	NA	NA	NA	NA	NA	NA	4.9998
1152	7	140055425	140055425	C	A	intronic	SLC37A3	NA	NA	NA	intronic	ENSG00000157800	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0002	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.015853	NA	NA	NA	NA	NA	NA	NA	4.9998
1152	19	830854	830854	T	C	exonic	AZU1	NA	synonymous SNV	AZU1:NM_001700:exon4:c.T507C:p.F169F	exonic	ENSG00000172232	NA	synonymous SNV	ENSG00000172232:ENST00000233997:exon4:c.T507C:p.F169F	NA	NA	19p13.3	NA	Name=ZNF263	NA	NA	rs595844	0.63	0.63	0.632	0.666933	0.5497	0.495	0.6398	0.941	0.6135	0.55	0.47	0.61	0.95	0.5828	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.203639	NA	NA	0.534651	0.87744	ID=COSM440677;OCCURENCE=1(breast)	0.71	NA	4.9995156
1152	1	22234654	22234654	C	T	intronic	HSPG2	NA	NA	NA	ncRNA_exonic	ENSG00000232037	NA	NA	NA	Score=749;Name=lod=1474	NA	1p36.12	NA	NA	NA	NA	rs4654995	0.16	0.16	0.146	0.153554	0.334	0.0208	0.1801	0.031	0.2515	0.34	0.02	0.19	0.05	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.762258	2.762258	NA	NA	NA	NA	0.138	NA	4.9993333
1152	12	49522786	49522786	C	A	intronic	TUBA1B	NA	NA	NA	ncRNA_intronic	ENSG00000258017	NA	NA	NA	NA	NA	12q13.12	NA	NA	Name=5	NA	rs1865157	0.51	0.51	NA	0.539736	0.334	0.6835	0.3617	0.643	0.59	0.34	0.72	0.38	0.64	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-3.431346	NA	NA	NA	NA	NA	0.478	NA	4.9993333
1152	2	160710922	160710922	T	C	exonic	LY75,LY75-CD302	NA	synonymous SNV	LY75-CD302:NM_001198759:exon18:c.A2544G:p.A848A,LY75-CD302:NM_001198760:exon18:c.A2544G:p.A848A,LY75:NM_002349:exon18:c.A2544G:p.A848A	exonic	ENSG00000054219,ENSG00000248672	NA	synonymous SNV	ENSG00000054219:ENST00000263636:exon18:c.A2544G:p.A848A,ENSG00000248672:ENST00000504764:exon18:c.A2544G:p.A848A,ENSG00000248672:ENST00000505052:exon18:c.A2544G:p.A848A,ENSG00000054219:ENST00000553424:exon18:c.A2544G:p.A848A,ENSG00000054219:ENST00000554112:exon18:c.A2544G:p.A848A	Score=441;Name=lod=83	NA	2q24.2	NA	NA	NA	NA	rs2729705	0.56	0.56	0.582	0.522364	0.5736	0.4583	0.438	0.7413	0.2996	0.57	0.45	0.45	0.75	0.5289	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.864424	NA	NA	0.564884	0.71448	NA	0.616	NA	4.9992826
1152	4	74285363	74285363	C	T	intronic	ALB	NA	NA	NA	intronic	ENSG00000163631	NA	NA	NA	NA	NA	4q13.3	NA	Name=Pol2	NA	NA	rs141131597	0.0014	0.0014	0.002	0.00119808	NA	NA	0.0014	0.0038	NA	NA	NA	0.0028	0.0041	0.0008	0.0045	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.243963	NA	NA	0.000116	0.004539	NA	NA	NA	4.999084
1152	10	126517989	126517989	G	A	exonic	FAM175B	NA	synonymous SNV	FAM175B:NM_032182:exon7:c.G606A:p.V202V	exonic	ENSG00000165660	NA	synonymous SNV	ENSG00000165660:ENST00000298492:exon7:c.G606A:p.V202V	NA	NA	10q26.13	Score=790;Name=V$PAX4_04	NA	NA	NA	rs2303611	0.48	0.48	0.452	0.483027	0.5457	0.5873	0.5663	0.1694	0.6759	0.54	0.61	0.53	0.21	0.5516	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.130577	NA	NA	0.570349	0.236723	NA	0.609	NA	4.9990176
1152	1	230381977	230381977	A	G	intronic	GALNT2	NA	NA	NA	intronic	ENSG00000143641	NA	NA	NA	NA	NA	1q42.13	NA	NA	Name=2	NA	rs139940158	0.0005	0.0005	0.001	0.000199681	0.001	NA	NA	NA	NA	0.0013	NA	NA	NA	NA	0.0013	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.047383	NA	NA	NA	NA	NA	NA	NA	4.999
1152	2	132369089	132369089	A	G	intergenic	RNU6-81P,C2orf27A	dist=8621;dist=110975	NA	NA	ncRNA_intronic	ENSG00000204434	NA	NA	NA	NA	NA	2q21.1	NA	NA	NA	NA	NA	NA	NA	NA	0.000199681	0.001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.782061	NA	NA	NA	NA	NA	NA	NA	4.999
1152	2	173423345	173423345	C	T	intronic	PDK1	NA	NA	NA	intronic	ENSG00000152256	NA	NA	NA	NA	NA	2q31.1	NA	Name=KAP1	NA	NA	rs111666806	0.02	0.02	0.02	0.0211661	0.001	NA	0.0029	0.0779	NA	0.0013	NA	0.01	0.08	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.659548	NA	NA	NA	NA	NA	0.029	NA	4.999
1152	2	173659987	173659987	A	G	intronic	RAPGEF4	NA	NA	NA	intronic	ENSG00000091428	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	NA	NA	NA	NA	0.00119808	0.001	NA	NA	NA	0.0051	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.112985	NA	NA	NA	NA	NA	NA	NA	4.999
1152	2	174907865	174907865	G	A	intergenic	SP3,OLA1	dist=77435;dist=29310	NA	NA	ncRNA_exonic	ENSG00000235414	NA	NA	NA	Score=788;Name=lod=2123	NA	2q31.1	NA	NA	NA	NA	rs16841764	0.03	0.03	0.03	0.0453275	0.001	NA	0.0144	0.1626	0.001	0.0013	NA	0.01	0.14	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.409048	1.409048	NA	NA	NA	NA	0.058	NA	4.999
1152	2	174908579	174908579	C	T	intergenic	SP3,OLA1	dist=78149;dist=28596	NA	NA	ncRNA_exonic	ENSG00000235414	NA	NA	NA	Score=788;Name=lod=2123	NA	2q31.1	NA	NA	NA	NA	rs10166201	0.03	0.03	0.037	0.0459265	0.001	NA	0.0144	0.1649	0.001	0.0013	NA	0.01	0.14	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.356292	NA	NA	NA	NA	NA	0.058	NA	4.999
1152	2	231943293	231943293	G	A	intronic	PSMD1	NA	NA	NA	intronic	ENSG00000173692	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	NA	NA	NA	NA	0.000199681	0.001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.061369	NA	NA	NA	NA	NA	NA	NA	4.999
1152	3	161046975	161046975	G	C	intergenic	NMD3,SPTSSB	dist=77180;dist=15605	NA	NA	ncRNA_exonic	ENSG00000243838	NA	NA	NA	Score=661;Name=lod=647	NA	3q26.1	NA	NA	NA	NA	rs12634781	0.04	0.04	0.04	0.0417332	0.001	0.0714	0.0058	0.0613	0.0521	0.0013	0.08	NA	0.08	NA	0.087	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.164911	NA	NA	NA	NA	NA	0.058	NA	4.999
1152	4	89653402	89653402	T	G	intronic	FAM13A	NA	NA	NA	intronic	ENSG00000138640	NA	NA	NA	NA	NA	4q22.1	NA	NA	NA	NA	NA	NA	NA	NA	0.000399361	0.001	NA	0.0014	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.544293	NA	NA	NA	NA	NA	NA	NA	4.999
1152	5	68364848	68364848	G	A	intergenic	PIK3R1,SLC30A5	dist=767199;dist=24928	NA	NA	ncRNA_exonic	ENSG00000249183	NA	NA	NA	Score=679;Name=lod=769	NA	5q13.1	NA	NA	NA	NA	rs114451050	0.02	0.02	0.02	0.0183706	0.001	NA	0.0072	0.0643	0.001	0.0013	NA	0.01	0.08	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.68687	NA	NA	NA	NA	NA	0.022	NA	4.999
1152	8	24773345	24773345	T	G	intronic	NEFM	NA	NA	NA	intronic	ENSG00000104722	NA	NA	NA	NA	NA	8p21.2	NA	NA	Name=7	NA	rs139935951	0.01	0.01	0.005	0.0103834	0.001	NA	0.0043	0.0363	NA	NA	NA	0.0028	0.03	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.578311	NA	NA	NA	NA	NA	0.014	NA	4.999
1152	9	86403660	86403660	A	C	intronic	GKAP1	NA	NA	NA	intronic	ENSG00000165113	NA	NA	NA	NA	NA	9q21.32	NA	NA	NA	NA	NA	NA	NA	NA	0.000199681	0.001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.598695	NA	NA	NA	NA	NA	NA	NA	4.999
1152	10	38934323	38934323	T	C	intergenic	LOC399744,ACTR3BP5	dist=193242;dist=55404	NA	NA	ncRNA_intronic	ENSG00000233867	NA	NA	NA	NA	NA	10p11.1	NA	NA	NA	NA	NA	NA	NA	NA	0.000998403	0.001	NA	0.0014	0.0023	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.248786	NA	NA	NA	NA	NA	NA	NA	4.999
1152	12	101336383	101336383	A	G	intronic	ANO4	NA	NA	NA	intronic	ENSG00000151572	NA	NA	NA	NA	NA	12q23.1	NA	NA	NA	NA	NA	NA	NA	NA	0.000599042	0.001	NA	0.0014	0.0008	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.911565	NA	NA	NA	NA	NA	NA	NA	4.999
1152	14	19118192	19118192	A	G	intergenic	NONE,OR11H12	dist=NONE;dist=259402	NA	NA	ncRNA_exonic	ENSG00000215398	NA	NA	NA	NA	NA	14q11.2	NA	Name=FOXA1_(C-20),GATA3_(SC-268)	NA	NA	rs77434589	NA	NA	NA	0.000399361	0.001	NA	NA	NA	0.001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.264348	NA	0	NA	NA	NA	NA	NA	4.999
1152	16	28898682	28898682	G	A	intronic	ATP2A1	NA	NA	NA	intronic	ENSG00000196296	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	NA	NA	NA	NA	0.000798722	0.001	NA	0.0043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.946419	NA	NA	NA	NA	NA	NA	NA	4.999
1152	16	88958503	88958503	G	A	intronic	CBFA2T3	NA	NA	NA	intronic	ENSG00000129993	NA	NA	NA	NA	NA	16q24.3	NA	NA	NA	NA	NA	NA	NA	NA	0.000798722	0.001	NA	0.0043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.604521	NA	NA	NA	NA	NA	NA	NA	4.999
1152	17	21544470	21544470	A	G	intergenic	C17orf51,FAM27L	dist=89529;dist=280900	NA	NA	ncRNA_exonic	ENSG00000265019	NA	NA	NA	Score=626;Name=lod=468	NA	17p11.2	NA	NA	NA	NA	rs9285743	NA	NA	0.44	0.000199681	0.001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.337567	NA	NA	NA	NA	NA	NA	NA	4.999
1152	19	22604885	22604885	G	A	intronic	ZNF98	NA	NA	NA	intronic	ENSG00000197360	NA	NA	NA	NA	NA	19p12	NA	Name=YY1	NA	NA	rs59044739	0.05	0.05	0.053	0.0537141	0.001	NA	0.013	0.1959	NA	NA	NA	0.02	0.19	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.434269	NA	NA	NA	NA	NA	0.051	NA	4.999
1152	19	22803537	22803537	C	T	intergenic	LOC440518,ZNF492	dist=17185;dist=13589	NA	NA	ncRNA_intronic	ENSG00000268038	NA	NA	NA	Score=608;Name=lod=396	NA	19p12	NA	NA	NA	NA	rs10411593	0.05	0.05	0.061	0.0605032	0.001	NA	0.0101	0.2224	0.001	0.0013	NA	0.01	0.23	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.597286	NA	NA	NA	NA	NA	0.072	NA	4.999
1152	12	9222456	9222456	C	A	intronic	A2M	NA	NA	NA	intronic	ENSG00000175899	NA	NA	NA	NA	NA	12p13.31	NA	NA	Name=2	NA	rs185822297	0.0009	0.0009	NA	0.000399361	0.001	NA	0.0014	NA	NA	0.0013	NA	0.0028	NA	0.00006694	0.0028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.1085	NA	NA	NA	NA	NA	NA	NA	4.9989331
1152	4	74302077	74302077	G	A	intronic	AFP	NA	NA	NA	intronic	ENSG00000081051	NA	NA	NA	NA	NA	4q13.3	NA	Name=HEY1	NA	NA	rs111642463	0.0014	0.0014	NA	0.00119808	NA	NA	0.0014	0.0038	NA	NA	NA	0.0028	0.0041	0.0012	0.0041	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.645005	NA	NA	0.000116	0.004096	NA	NA	NA	4.998684
1152	21	36421331	36421331	T	C	intronic	RUNX1	NA	NA	NA	UTR5	ENSG00000159216	ENST00000300305:c.-135A>G	NA	NA	NA	NA	21q22.12	NA	Name=CTCF,c-Fos,NFKB	NA	NA	rs56045941	0.11	0.11	0.112	0.0938498	0.168	0.003	0.1081	0.1203	0.0654	0.18	0.0017	0.12	0.14	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.410649	NA	NA	NA	NA	NA	0.109	NA	4.9986667
1152	1	43908981	43908981	C	T	intronic	SZT2	NA	NA	NA	intronic	ENSG00000198198	NA	NA	NA	NA	NA	1p34.2	NA	NA	Name=14	NA	rs200387534	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0008	0.0007	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.851022	NA	NA	0.000698	0.000227	NA	NA	NA	4.998502
1152	4	123269882	123269882	T	A	intronic	KIAA1109	NA	NA	NA	intronic	ENSG00000138688	NA	NA	NA	Score=701;Name=lod=943	NA	4q27	NA	NA	NA	NA	rs199513340	0.0005	0.0005	NA	0.000199681	0.001	NA	NA	NA	NA	0.0013	NA	NA	NA	0.0004	0.0013	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.377459	2.377459	NA	0.000246	0.000277	NA	NA	NA	4.998354
1152	3	50824215	50824215	C	T	intronic	DOCK3	NA	NA	NA	ncRNA_exonic	ENSG00000235278	NA	NA	NA	Score=753;Name=lod=1526	NA	3p21.2	NA	NA	NA	NA	rs62261860	0.23	0.23	0.219	0.242812	0.335	0.2133	0.2205	0.0658	0.4335	0.33	0.22	0.23	0.09	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.739564	NA	NA	NA	NA	NA	0.145	NA	4.9983333
1152	3	49064528	49064528	C	A	intronic	IMPDH2	NA	NA	NA	intronic	ENSG00000178035	NA	NA	NA	NA	NA	3p21.31	NA	NA	Name=3	NA	rs190064444	0.0009	0.0009	NA	0.000399361	0.001	NA	0.0014	NA	NA	0.0013	NA	0.0028	NA	0.0002	0.0028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.367652	NA	NA	0.000581	0.000227	NA	NA	NA	4.998219
1152	2	130750983	130750983	C	T	intergenic	RAB6C,LOC440905	dist=10672;dist=32589	NA	NA	ncRNA_exonic	ENSG00000217289	NA	NA	NA	Score=720;Name=lod=1121	NA	2q21.1	NA	NA	NA	NA	rs113764089	0.01	0.01	NA	0.00479233	0.002	NA	0.0043	0.0144	NA	0.0026	NA	0.01	0.02	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.116847	NA	NA	NA	NA	NA	NA	NA	4.998
1152	2	130751145	130751145	C	A	intergenic	RAB6C,LOC440905	dist=10834;dist=32427	NA	NA	ncRNA_exonic	ENSG00000217289	NA	NA	NA	Score=720;Name=lod=1121	NA	2q21.1	NA	NA	NA	NA	rs112980419	0.01	0.01	NA	0.00479233	0.002	NA	0.0043	0.0144	NA	0.0026	NA	0.01	0.02	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.002867	NA	NA	NA	NA	NA	NA	NA	4.998
1152	9	100461396	100461396	C	T	intergenic	XPA,FOXE1	dist=1705;dist=154141	NA	NA	ncRNA_exonic	ENSG00000214417	NA	NA	NA	Score=259;Name=lod=15	NA	9q22.33	NA	NA	NA	NA	rs73500395	0.13	0.13	0.119	0.169529	0.002	0.1518	0.1628	0.4213	0.0245	NA	0.11	0.1	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.81527	NA	NA	NA	NA	NA	0.109	NA	4.998
1152	9	100461509	100461509	G	A	intergenic	XPA,FOXE1	dist=1818;dist=154028	NA	NA	ncRNA_exonic	ENSG00000214417	NA	NA	NA	Score=540;Name=lod=209	NA	9q22.33	NA	NA	NA	NA	rs73500397	0.13	0.13	0.123	0.169529	0.002	0.1518	0.1628	0.4213	0.0245	NA	0.11	0.1	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.40651	NA	NA	NA	NA	NA	0.109	NA	4.998
1152	9	100461778	100461778	T	C	intergenic	XPA,FOXE1	dist=2087;dist=153759	NA	NA	ncRNA_exonic	ENSG00000214417	NA	NA	NA	NA	NA	9q22.33	NA	NA	Name=17	NA	rs73500400	0.13	0.13	0.109	0.169529	0.002	0.1518	0.1628	0.4213	0.0245	NA	0.11	0.1	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.316256	NA	NA	NA	NA	NA	0.101	NA	4.998
1152	9	100462412	100462412	C	T	intergenic	XPA,FOXE1	dist=2721;dist=153125	NA	NA	ncRNA_exonic	ENSG00000214417	NA	NA	NA	Score=486;Name=lod=126	NA	9q22.33	NA	NA	NA	NA	rs56200116	0.13	0.13	0.123	0.168131	0.002	0.1518	0.1628	0.416	0.0245	NA	0.11	0.1	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.1644	NA	NA	NA	NA	NA	0.109	NA	4.998
1152	11	62365359	62365359	G	A	intronic	MTA2	NA	NA	NA	intronic	ENSG00000149480	NA	NA	NA	NA	NA	11q12.3	Score=899;Name=V$MEIS1_01	NA	NA	NA	rs59314885	0.03	0.03	0.04	0.0301518	0.002	NA	0.0101	0.1074	NA	0.0026	NA	0.01	0.14	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.355827	1.355827	NA	NA	NA	NA	0.036	NA	4.998
1152	11	62521256	62521256	C	T	intronic	ZBTB3	NA	NA	NA	intronic	ENSG00000185670	NA	NA	NA	NA	NA	11q12.3	NA	Name=TBP,RFX5_(N-494),Egr-1,GATA-1	NA	NA	rs572513	0.03	0.03	0.03	0.0291534	0.002	NA	0.0144	0.1014	NA	0.0026	NA	0.01	0.12	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.265003	NA	NA	NA	NA	NA	0.029	NA	4.998
1152	11	65789461	65789461	G	A	intronic	CATSPER1	NA	NA	NA	intronic	ENSG00000175294	NA	NA	NA	NA	NA	11q13.1	NA	NA	NA	NA	NA	NA	NA	NA	0.00119808	0.002	NA	0.0058	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.885926	NA	NA	NA	NA	NA	NA	NA	4.998
1152	12	1036225	1036225	T	C	intronic	RAD52	NA	NA	NA	intronic	ENSG00000002016	NA	NA	NA	NA	NA	12p13.33	NA	NA	NA	NA	rs104895069	NA	NA	NA	0.000399361	0.002	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.177898	NA	NA	NA	NA	NA	NA	CLINSIG=untested;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000114921.1;CLNDSDB=.;CLNDSDBID=.	4.998
1152	12	48563151	48563151	C	T	intergenic	ASB8,C12orf68	dist=11774;dist=14215	NA	NA	ncRNA_exonic	ENSG00000257885	NA	NA	NA	Score=792;Name=lod=2210	NA	12q13.11	NA	NA	NA	NA	rs113603629	0.0018	0.0018	NA	0.00179712	0.002	0.001	0.0086	NA	NA	0.0013	0.0017	0.01	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.004402	NA	NA	NA	NA	NA	0.007	NA	4.998
1152	13	101763647	101763647	T	C	intronic	NALCN	NA	NA	NA	intronic	ENSG00000102452	NA	NA	NA	NA	NA	13q33.1	NA	NA	NA	NA	NA	NA	NA	NA	0.000399361	0.002	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.149732	NA	NA	NA	NA	NA	NA	NA	4.998
1152	19	18856574	18856574	A	G	intronic	CRTC1	NA	NA	NA	intronic	ENSG00000105662	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	NA	NA	NA	NA	0.000599042	0.002	NA	0.0014	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.360937	NA	NA	NA	NA	NA	NA	NA	4.998
1152	1	153318561	153318561	A	T	intronic	PGLYRP4	NA	NA	NA	intronic	ENSG00000163218	NA	NA	NA	NA	NA	1q21.3	NA	Name=NFKB,USF2	NA	NA	rs201890699	NA	NA	NA	0.000199681	0.001	NA	NA	NA	NA	NA	NA	NA	NA	0.0004	0.0007	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.29086	NA	NA	0.000698	0.000681	NA	NA	NA	4.997902
1152	20	57484311	57484311	C	G	intronic	GNAS	NA	NA	NA	intronic	ENSG00000087460	NA	NA	NA	NA	NA	20q13.32	NA	Name=Pol2-4H8	NA	NA	rs199817220	0.0005	0.0005	NA	0.000199681	0.001	NA	NA	NA	NA	0.0013	NA	NA	NA	0.0004	0.0013	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.654617	NA	NA	0.00093	0.000227	NA	NA	NA	4.99767
1152	1	168215499	168215499	C	A	ncRNA_exonic	ANKRD36BP1	NA	NA	NA	ncRNA_exonic	ENSG00000214262	NA	NA	NA	Score=395;Name=lod=54	NA	1q24.2	NA	NA	NA	NA	rs2205699	0.58	0.58	0.575	0.538538	0.669	0.4385	0.5533	0.593	0.4233	0.67	0.44	0.58	0.59	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.102341	NA	NA	NA	NA	NA	0.63	NA	4.9976666
1152	2	73898359	73898359	G	A	ncRNA_intronic	ALMS1P	NA	NA	NA	ncRNA_intronic	ENSG00000163016	NA	NA	NA	NA	NA	2p13.1	NA	NA	Name=3	NA	rs4341964	0.55	0.55	0.503	0.552117	0.669	0.6925	0.6744	0.1793	0.7045	0.65	0.66	0.67	0.17	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.379435	NA	NA	NA	NA	NA	0.5	NA	4.9976666
1152	2	136409250	136409250	T	G	intronic	R3HDM1	NA	NA	NA	intronic	ENSG00000048991	NA	NA	NA	NA	NA	2q21.3	NA	NA	NA	NA	NA	NA	NA	NA	0.000998403	0.001	0.001	0.0014	NA	0.002	NA	NA	NA	NA	0.0014	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.771748	1.771748	NA	NA	NA	NA	NA	NA	4.9976
1152	8	143961005	143961005	T	C	exonic	CYP11B1	NA	synonymous SNV	CYP11B1:NM_000497:exon1:c.A225G:p.L75L,CYP11B1:NM_001026213:exon1:c.A225G:p.L75L	exonic	ENSG00000160882	NA	synonymous SNV	ENSG00000160882:ENST00000292427:exon1:c.A225G:p.L75L,ENSG00000160882:ENST00000377675:exon1:c.A225G:p.L75L,ENSG00000160882:ENST00000517471:exon1:c.A225G:p.L75L	Score=464;Name=lod=103	NA	8q24.3	NA	NA	NA	NA	rs6410	0.58	0.58	0.54	0.584065	0.5557	0.752	0.6268	0.4175	0.635	0.55	0.75	0.59	0.41	0.5724	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.393746	NA	NA	0.541163	0.442351	NA	0.609	NA	4.9974036
1152	1	120508991	120508991	G	A	intronic	NOTCH2	NA	NA	NA	intronic	ENSG00000134250	NA	NA	NA	NA	NA	1p12	NA	NA	Name=66	NA	rs372367275	NA	NA	NA	0.000199681	0.001	NA	NA	NA	NA	NA	NA	NA	NA	0.0006	0.0013	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.508089	NA	NA	0.001279	0.000454	NA	NA	NA	4.997121
1152	1	159336315	159336315	G	A	intergenic	OR10J3,OR10J1	dist=51866;dist=73197	NA	NA	ncRNA_exonic	ENSG00000251686	NA	NA	NA	Score=456;Name=lod=95	NA	1q23.2	NA	NA	NA	NA	rs7515532	0.15	0.15	0.156	0.185104	0.003	NA	0.0504	0.6725	NA	0.0013	NA	0.05	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.790237	1.790237	0	NA	NA	NA	0.181	NA	4.997
1152	4	166259719	166259719	T	G	intronic	MSMO1	NA	NA	NA	intronic	ENSG00000052802	NA	NA	NA	NA	NA	4q32.3	NA	NA	Name=13	NA	rs17046259	0.08	0.08	0.081	0.0992412	0.003	NA	0.0389	0.3517	0.002	0.0013	NA	0.03	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.49714	NA	NA	NA	NA	NA	0.051	NA	4.997
1152	8	1801458	1801458	G	A	intronic	ARHGEF10	NA	NA	NA	intronic	ENSG00000104728	NA	NA	NA	NA	NA	8p23.3	NA	NA	NA	NA	NA	NA	NA	NA	0.000998403	0.003	NA	0.0014	0.0008	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.611037	NA	NA	NA	NA	NA	NA	NA	4.997
1152	9	31254233	31254233	A	G	intergenic	LOC401497,ACO1	dist=845781;dist=1130368	NA	NA	ncRNA_exonic	ENSG00000232203	NA	NA	NA	Score=578;Name=lod=298	NA	9p21.1	NA	NA	NA	NA	rs61734459	0.0018	0.0018	0.001	0.00139776	0.003	NA	0.0043	NA	0.001	0.004	NA	0.0028	NA	NA	0.004	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.001583	NA	NA	NA	NA	NA	0.022	NA	4.997
1152	12	52183264	52183264	C	T	intronic	SCN8A	NA	NA	NA	intronic	ENSG00000196876	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	NA	NA	NA	NA	0.00139776	0.003	NA	0.0014	NA	0.0031	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.38411	1.38411	NA	NA	NA	NA	NA	NA	4.997
1152	19	7795379	7795379	G	T	intronic	CLEC4G	NA	NA	NA	intronic	ENSG00000182566	NA	NA	NA	NA	NA	19p13.2	NA	Name=RXRA	NA	NA	rs186988911	0.0032	0.0032	NA	0.00499201	0.003	NA	0.0043	0.0136	0.001	NA	NA	0.01	0.01	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.869879	NA	NA	NA	NA	NA	NA	NA	4.997
1152	14	105924603	105924603	G	T	intronic	MTA1	NA	NA	NA	intronic	ENSG00000182979	NA	NA	NA	NA	NA	14q32.33	Score=920;Name=V$HOXA3_01	NA	NA	NA	rs188950256	0.0005	0.0005	NA	0.000798722	0.002	NA	0.0029	NA	NA	NA	NA	0.0028	NA	0.0004	0.0028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.347393	NA	NA	0.000814	0.000227	NA	NA	NA	4.996786
1152	11	43919694	43919694	C	T	ncRNA_exonic	SEC14L1P1	NA	NA	NA	ncRNA_exonic	ENSG00000213693	NA	NA	NA	Score=649;Name=lod=580	NA	11p11.2	NA	NA	NA	NA	rs2460130	0.59	0.59	0.596	0.550919	0.67	0.6915	0.3934	0.469	0.5061	0.67	0.67	0.43	0.49	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.647788	NA	NA	NA	NA	NA	0.543	NA	4.9966666
1152	11	43919778	43919778	C	T	ncRNA_exonic	SEC14L1P1	NA	NA	NA	ncRNA_exonic	ENSG00000213693	NA	NA	NA	Score=649;Name=lod=580	NA	11p11.2	NA	NA	NA	NA	rs2434474	0.59	0.59	0.595	0.551518	0.67	0.6915	0.3948	0.469	0.5082	0.67	0.67	0.43	0.49	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.070434	NA	NA	NA	NA	NA	0.543	NA	4.9966666
1152	22	24002030	24002030	T	C	ncRNA_intronic	GUSBP11	NA	NA	NA	ncRNA_exonic	ENSG00000228315	NA	NA	NA	Score=555;Name=lod=240	NA	22q11.23	NA	NA	NA	NA	rs5751705	0.72	0.72	0.721	0.71845	0.67	0.6716	0.7406	0.7844	0.7117	0.69	0.67	0.7	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.70101	NA	NA	NA	NA	NA	0.812	NA	4.9966666
1152	10	85984423	85984423	C	T	exonic	LRIT2	NA	synonymous SNV	LRIT2:NM_001017924:exon2:c.G558A:p.G186G	exonic	ENSG00000204033	NA	synonymous SNV	ENSG00000204033:ENST00000372113:exon2:c.G558A:p.G186G,ENSG00000204033:ENST00000538192:exon2:c.G558A:p.G186G	NA	NA	10q23.1	NA	NA	NA	NA	rs11200926	0.22	0.22	0.181	0.207867	0.2346	0.3452	0.2911	0.0522	0.1902	0.22	0.31	0.28	0.07	0.2103	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.480502	NA	NA	0.225116	0.087608	NA	0.13	NA	4.9966506
1152	13	25442727	25442727	T	C	intronic	RNF17	NA	NA	NA	intronic	ENSG00000132972	NA	NA	NA	NA	NA	13q12.12	Score=1000;Name=V$AML1_01	NA	NA	NA	rs185569714	0.0009	0.0009	NA	0.000998403	0.002	NA	0.0043	NA	NA	0.0013	NA	0.0028	NA	0.0006	0.0028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.79698	1.79698	NA	0.000814	0	NA	NA	NA	4.996586
1152	16	601632	601632	T	C	exonic	SOLH	NA	synonymous SNV	SOLH:NM_005632:exon9:c.T2313C:p.G771G	exonic	ENSG00000103326	NA	synonymous SNV	ENSG00000103326:ENST00000219611:exon9:c.T2313C:p.G771G	NA	NA	16p13.3	Score=846;Name=V$MRF2_01	NA	NA	NA	rs3213574	0.68	0.68	0.629	0.717252	0.5199	0.7788	0.6758	0.8268	0.7382	0.54	0.8	0.64	0.81	0.6296	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.980459	NA	NA	0.520828	0.783538	NA	0.449	NA	4.9963386
1152	12	57423517	57423517	C	T	intronic	MYO1A	NA	NA	NA	intronic	ENSG00000166866	NA	NA	NA	NA	NA	12q13.3	NA	NA	Name=2	NA	rs55985817	0.01	0.01	0.006	0.00339457	0.001	NA	0.0072	0.0083	NA	NA	NA	0.01	0.02	0.0013	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.22088	NA	NA	0.001628	0.003858	NA	NA	NA	4.996072
1152	2	37076594	37076594	T	C	UTR3	STRN	NM_003162:c.*5A>G	NA	NA	UTR3	ENSG00000115808	ENST00000263918:c.*5A>G,ENST00000379213:c.*5A>G	NA	NA	NA	NA	2p22.2	NA	Name=CEBPB	NA	NA	rs62132521	0.23	0.23	0.23	0.214657	0.0994	0.5407	0.17	0.0968	0.1881	0.1	0.58	0.14	0.11	0.15	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.006825	NA	NA	0.087907	0.108488	ID=COSN166066;OCCURENCE=1(breast)	0.21	NA	4.9960264
1152	2	234386134	234386134	A	G	exonic	USP40	NA	synonymous SNV	USP40:NM_018218:exon31:c.T3648C:p.H1216H	exonic	ENSG00000085982	NA	synonymous SNV	ENSG00000085982:ENST00000427112:exon31:c.T3612C:p.H1204H,ENSG00000085982:ENST00000450966:exon31:c.T3648C:p.H1216H,ENSG00000085982:ENST00000251722:exon32:c.T3612C:p.H1204H	NA	NA	2q37.1	NA	NA	NA	NA	rs2971863	0.24	0.24	0.235	0.25619	0.2455	0.1438	0.1542	0.5053	0.1186	0.23	0.12	0.15	0.47	0.2149	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.246155	NA	NA	0.210252	0.417473	NA	0.232	NA	4.9960146
1152	1	21042188	21042188	G	T	intronic	KIF17	NA	NA	NA	intronic	ENSG00000117245	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	NA	NA	NA	NA	0.00159744	0.004	NA	0.0029	0.0015	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.869856	NA	NA	NA	NA	NA	0.007	NA	4.996
1152	1	110194226	110194226	G	A	intergenic	AMPD2,GSTM4	dist=19549;dist=4472	NA	NA	ncRNA_exonic	ENSG00000235045	NA	NA	NA	Score=757;Name=lod=1586	NA	1p13.3	NA	NA	NA	NA	rs150732584	0.0009	0.0009	0.002	0.000798722	0.004	NA	NA	NA	NA	0.0026	NA	NA	NA	NA	0.0026	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.651156	NA	NA	NA	NA	NA	NA	NA	4.996
1152	2	130987133	130987133	G	A	intergenic	TUBA3E,CCDC115	dist=31099;dist=108683	NA	NA	ncRNA_exonic	ENSG00000213225	NA	NA	NA	Score=582;Name=lod=310	NA	2q21.1	NA	NA	NA	NA	rs114368625	0.02	0.02	0.016	0.0307508	0.004	NA	0.0144	0.1059	NA	0.004	NA	0.01	0.09	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.363022	NA	NA	NA	NA	NA	0.022	NA	4.996
1152	2	130987536	130987536	G	C	intergenic	TUBA3E,CCDC115	dist=31502;dist=108280	NA	NA	ncRNA_exonic	ENSG00000213225	NA	NA	NA	Score=609;Name=lod=398	NA	2q21.1	NA	NA	NA	NA	rs112419252	0.02	0.02	0.01	0.0245607	0.004	NA	0.013	0.0832	NA	0.004	NA	0.01	0.07	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.10543	NA	NA	NA	NA	NA	0.022	NA	4.996
1152	2	130987580	130987580	T	C	intergenic	TUBA3E,CCDC115	dist=31546;dist=108236	NA	NA	ncRNA_exonic	ENSG00000213225	NA	NA	NA	Score=609;Name=lod=398	NA	2q21.1	NA	NA	NA	NA	rs113153044	0.03	0.03	0.021	0.0319489	0.004	NA	0.0144	0.1104	NA	0.004	NA	0.01	0.1	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.040898	NA	NA	NA	NA	NA	0.036	NA	4.996
1152	2	130988070	130988070	C	T	intergenic	TUBA3E,CCDC115	dist=32036;dist=107746	NA	NA	ncRNA_exonic	ENSG00000213225	NA	NA	NA	Score=728;Name=lod=1216	NA	2q21.1	NA	NA	NA	NA	rs11885230	0.03	0.03	0.017	0.0317492	0.004	NA	0.0144	0.1097	NA	0.004	NA	0.01	0.1	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.010967	NA	NA	NA	NA	NA	NA	NA	4.996
1152	2	130988622	130988622	C	T	intergenic	TUBA3E,CCDC115	dist=32588;dist=107194	NA	NA	ncRNA_exonic	ENSG00000213225	NA	NA	NA	Score=652;Name=lod=595	NA	2q21.1	NA	NA	NA	NA	rs114624887	0.03	0.03	0.014	0.0327476	0.004	NA	0.0144	0.1104	0.0041	0.004	NA	0.01	0.1	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.294885	NA	NA	NA	NA	NA	0.014	NA	4.996
1152	8	124301077	124301077	C	T	intergenic	ZHX1-C8ORF76,ATAD2	dist=14350;dist=31014	NA	NA	ncRNA_exonic	ENSG00000253336	NA	NA	NA	Score=711;Name=lod=1038	NA	8q24.13	NA	NA	NA	NA	rs117027248	0.0032	0.0032	0.001	0.00499201	0.004	0.001	0.0058	NA	0.0164	0.01	0.0017	0.01	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.065468	NA	NA	NA	NA	NA	0.007	NA	4.996
1152	17	6225733	6225733	C	T	intergenic	WSCD1,AIPL1	dist=197986;dist=101326	NA	NA	ncRNA_exonic	ENSG00000262609	NA	NA	NA	Score=682;Name=lod=789	NA	17p13.2	NA	NA	NA	NA	rs150206973	0.0027	0.0027	0.001	0.00159744	0.004	NA	0.0058	NA	NA	0.01	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.739017	1.739017	NA	NA	NA	NA	NA	NA	4.996
1152	18	55431184	55431184	A	C	intronic	ATP8B1	NA	NA	NA	intronic	ENSG00000081923	NA	NA	NA	Score=595;Name=lod=350	NA	18q21.31	NA	NA	NA	NA	rs79826979	0.02	0.02	0.021	0.0271565	0.004	NA	0.0072	0.0961	NA	0.0013	NA	0.01	0.1	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.755876	NA	NA	NA	NA	NA	0.014	NA	4.996
1152	20	31888984	31888984	T	C	intronic	BPIFB1	NA	NA	NA	intronic	ENSG00000125999	NA	NA	NA	NA	NA	20q11.21	NA	NA	Name=28	NA	rs6120220	0.05	0.05	0.056	0.0706869	0.004	0.001	0.0173	0.2549	NA	0.01	NA	0.02	0.2	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.277435	NA	NA	NA	NA	NA	0.058	NA	4.996
1152	15	91009192	91009192	T	C	intronic	IQGAP1	NA	NA	NA	intronic	ENSG00000140575	NA	NA	NA	NA	NA	15q26.1	NA	Name=c-Fos	Name=53	NA	rs2074583	0.43	0.43	0.424	0.464058	0.2932	0.6488	0.5331	0.3661	0.5327	0.3	0.64	0.46	0.38	0.3979	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.564147	NA	NA	0.312936	0.350318	NA	0.435	NA	4.995964
1152	22	24236819	24236819	T	C	ncRNA_exonic	LOC284889	NA	NA	NA	UTR3	ENSG00000218537	ENST00000406213:c.*416A>G	NA	NA	NA	NA	22q11.23	NA	Name=HA-E2F1,CTCF_(SC-5916),GABP,Pol2	NA	NA	rs2096525	0.21	0.21	0.193	0.207069	0.1809	0.1865	0.2089	0.2383	0.2117	0.18	0.21	0.24	0.25	0.1992	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.089243	NA	NA	0.124015	0.157986	NA	0.022	NA	4.995885
1152	15	89442606	89442606	C	T	UTR3	MFGE8	NM_005928:c.*20G>A,NM_001114614:c.*20G>A	NA	NA	UTR3	ENSG00000140545	ENST00000539437:c.*20G>A,ENST00000558018:c.*1159G>A,ENST00000268151:c.*20G>A,ENST00000268150:c.*20G>A,ENST00000566497:c.*20G>A,ENST00000542878:c.*20G>A	NA	NA	NA	NA	15q26.1	NA	Name=Pol2-4H8	NA	NA	rs2280214	0.09	0.09	0.11	0.0970447	0.1213	0.0466	0.0793	0.0726	0.1697	0.11	0.06	0.09	0.07	0.102	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.125684	NA	NA	0.114356	0.065909	NA	0.072	NA	4.9956774
1152	11	43919786	43919786	C	G	ncRNA_exonic	SEC14L1P1	NA	NA	NA	ncRNA_exonic	ENSG00000213693	NA	NA	NA	Score=649;Name=lod=580	NA	11p11.2	NA	NA	NA	NA	rs2460131	0.61	0.61	0.618	0.570687	0.671	0.7361	0.4452	0.4735	0.5174	0.67	0.71	0.48	0.5	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.065808	NA	NA	NA	NA	NA	0.551	NA	4.9956666
1152	11	62190700	62190700	T	C	downstream	SCGB1A1	NA	NA	NA	ncRNA_intronic	ENSG00000255446	NA	NA	NA	NA	NA	11q12.3	NA	NA	Name=11	NA	rs2302364	0.21	0.21	0.201	0.225639	0.171	0.244	0.1571	0.1755	0.3793	0.17	0.29	0.18	0.2	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.431844	NA	NA	NA	NA	NA	0.123	NA	4.9956666
1152	14	101200645	101200645	T	C	exonic	DLK1	NA	synonymous SNV	DLK1:NM_003836:exon5:c.T564C:p.I188I	exonic	ENSG00000185559	NA	synonymous SNV	ENSG00000185559:ENST00000331224:exon5:c.T564C:p.I188I,ENSG00000185559:ENST00000341267:exon5:c.T564C:p.I188I	Score=488;Name=lod=128	NA	14q32.2	NA	NA	NA	NA	rs1802710	0.75	0.75	0.706	0.743211	0.5447	0.994	0.6844	0.7731	0.6902	0.56	1	0.65	0.82	0.628	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.300916	1.300916	NA	0.498488	0.746028	ID=COSM432669;OCCURENCE=1(breast),1(prostate),1(large_intestine)	0.587	NA	4.9954786
1152	7	78115932	78115932	T	A	intronic	MAGI2	NA	NA	NA	ncRNA_exonic	ENSG00000226230	NA	NA	NA	Score=461;Name=lod=100	NA	7q21.11	NA	NA	NA	NA	rs10260935	0.32	0.32	0.289	0.358626	0.338	0.2262	0.3833	0.3578	0.5	0.33	0.22	0.38	0.36	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.317548	NA	NA	NA	NA	NA	0.362	NA	4.9953333
1152	17	4725254	4725254	A	T	intronic	PLD2	NA	NA	NA	intronic	ENSG00000129219	NA	NA	NA	NA	NA	17p13.2	NA	NA	Name=2	NA	rs73341622	0.01	0.01	0.007	0.0151757	NA	NA	0.0014	0.0567	NA	NA	NA	NA	0.04	0.0047	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.081392	NA	NA	0	0.050113	NA	0.022	NA	4.9953
1152	1	159800003	159800003	C	T	intronic	SLAMF8	NA	NA	NA	intronic	ENSG00000158714	NA	NA	NA	NA	NA	1q23.2	NA	NA	Name=80	NA	rs148674725	0.01	0.01	0.007	0.0139776	NA	NA	NA	0.053	NA	NA	NA	NA	0.05	0.0045	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.775543	NA	NA	0.000349	0.043123	NA	0.007	NA	4.995151
1152	19	40319232	40319232	G	A	intronic	DYRK1B	NA	NA	NA	intronic	ENSG00000105204	NA	NA	NA	NA	NA	19q13.2	NA	Name=GR	NA	NA	rs76318664	0.01	0.01	0.008	0.00858626	0.001	NA	0.0043	0.0295	NA	0.0013	NA	NA	0.03	0.0034	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.518939	NA	NA	0.000465	0.027463	NA	0.014	NA	4.995135
1152	2	101549562	101549562	A	G	intronic	NPAS2	NA	NA	NA	intronic	ENSG00000170485	NA	NA	NA	NA	NA	2q11.2	Score=708;Name=V$NRSF_01	NA	NA	NA	rs189693085	0.0018	0.0018	NA	0.00219649	0.005	NA	0.0086	NA	NA	0.0013	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.824914	1.824914	NA	NA	NA	NA	NA	NA	4.995
1152	2	130987779	130987779	A	G	intergenic	TUBA3E,CCDC115	dist=31745;dist=108037	NA	NA	ncRNA_exonic	ENSG00000213225	NA	NA	NA	Score=728;Name=lod=1216	NA	2q21.1	NA	NA	NA	NA	rs111487426	0.03	0.03	0.024	0.0393371	0.005	NA	0.0159	0.1369	NA	0.004	NA	0.02	0.12	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.032033	NA	NA	NA	NA	NA	0.051	NA	4.995
1152	2	130988017	130988017	C	G	intergenic	TUBA3E,CCDC115	dist=31983;dist=107799	NA	NA	ncRNA_exonic	ENSG00000213225	NA	NA	NA	Score=728;Name=lod=1216	NA	2q21.1	NA	NA	NA	NA	rs4519461	0.03	0.03	NA	0.0391374	0.005	NA	0.0159	0.1362	NA	0.004	NA	0.02	0.12	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.374979	NA	NA	NA	NA	NA	0.022	NA	4.995
1152	10	79493097	79493097	G	T	intergenic	KCNMA1,DLG5	dist=95520;dist=57452	NA	NA	ncRNA_exonic	ENSG00000213514	NA	NA	NA	Score=752;Name=lod=1511	NA	10q22.3	NA	NA	NA	NA	rs117264103	0.0032	0.0032	0.003	0.00179712	0.005	NA	0.0043	0.0008	NA	0.01	NA	0.0028	0.002	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.193051	NA	NA	NA	NA	NA	0.014	NA	4.995
1152	11	118959280	118959280	T	C	intronic	HMBS	NA	NA	NA	intronic	ENSG00000256269	NA	NA	NA	NA	NA	11q23.3	NA	NA	Name=2	NA	rs1144041	0.1	0.1	0.116	0.101038	0.005	NA	0.0562	0.3495	NA	0.01	NA	0.06	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.719713	1.719713	NA	NA	NA	NA	0.13	NA	4.995
1152	17	53638907	53638907	C	T	intergenic	MMD,TMEM100	dist=139566;dist=158081	NA	NA	ncRNA_exonic	ENSG00000236319	NA	NA	NA	Score=449;Name=lod=89	NA	17q22	NA	NA	NA	NA	rs61750872	NA	NA	NA	0.00159744	0.005	NA	0.0043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.377372	1.377372	NA	NA	NA	NA	NA	NA	4.995
1152	17	74922895	74922895	G	A	intronic	MGAT5B	NA	NA	NA	intronic	ENSG00000167889	NA	NA	NA	NA	NA	17q25.2	NA	NA	NA	NA	NA	NA	NA	NA	0.00279553	0.005	NA	0.0086	0.0023	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.755727	NA	NA	NA	NA	NA	0.007	NA	4.995
1152	20	49096451	49096451	G	A	intergenic	LOC284751,PTPN1	dist=164995;dist=30440	NA	NA	ncRNA_exonic	ENSG00000231715	NA	NA	NA	Score=448;Name=lod=88	NA	20q13.13	NA	NA	NA	NA	rs147196306	0.0018	0.0018	0.004	0.00139776	0.005	NA	0.0014	NA	0.001	0.01	NA	NA	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.883197	2.883197	NA	NA	NA	NA	NA	NA	4.995
1153	14	24843620	24843620	T	C	exonic	NFATC4	NA	synonymous SNV	NFATC4:NM_001198965:exon6:c.T1821C:p.T607T,NFATC4:NM_001198966:exon6:c.T1611C:p.T537T,NFATC4:NM_004554:exon6:c.T1821C:p.T607T,NFATC4:NM_001136022:exon7:c.T2010C:p.T670T,NFATC4:NM_001198967:exon7:c.T2010C:p.T670T	exonic	ENSG00000100968	NA	synonymous SNV	ENSG00000100968:ENST00000554473:exon3:c.T426C:p.T142T,ENSG00000100968:ENST00000555167:exon3:c.T426C:p.T142T,ENSG00000100968:ENST00000556759:exon3:c.T426C:p.T142T,ENSG00000100968:ENST00000554344:exon5:c.T1611C:p.T537T,ENSG00000100968:ENST00000554661:exon5:c.T1611C:p.T537T,ENSG00000100968:ENST00000557451:exon5:c.T1611C:p.T537T,ENSG00000100968:ENST00000250373:exon6:c.T1821C:p.T607T,ENSG00000100968:ENST00000422617:exon6:c.T1785C:p.T595T,ENSG00000100968:ENST00000553708:exon6:c.T1821C:p.T607T,ENSG00000100968:ENST00000553879:exon6:c.T1611C:p.T537T,ENSG00000100968:ENST00000554050:exon6:c.T1821C:p.T607T,ENSG00000100968:ENST00000555453:exon6:c.T1785C:p.T595T,ENSG00000100968:ENST00000556169:exon6:c.T1785C:p.T595T,ENSG00000100968:ENST00000413692:exon7:c.T2010C:p.T670T,ENSG00000100968:ENST00000424781:exon7:c.T1860C:p.T620T,ENSG00000100968:ENST00000539237:exon7:c.T1917C:p.T639T,ENSG00000100968:ENST00000553469:exon7:c.T1917C:p.T639T,ENSG00000100968:ENST00000554591:exon7:c.T2010C:p.T670T,ENSG00000100968:ENST00000554966:exon7:c.T1860C:p.T620T,ENSG00000100968:ENST00000555590:exon7:c.T1860C:p.T620T,ENSG00000100968:ENST00000556279:exon7:c.T1917C:p.T639T	Score=472;Name=lod=110	NA	14q12	NA	NA	NA	NA	rs2295298	0.33	0.33	0.31	0.284545	0.5885	0.1528	0.3876	0.0741	0.319	0.58	0.16	0.42	0.08	0.4788	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.400441	1.400441	NA	0.604884	0.157059	NA	0.486	NA	4.9944826
1153	3	123871197	123871197	C	T	intronic	KALRN	NA	NA	NA	ncRNA_exonic	ENSG00000240622	NA	NA	NA	Score=709;Name=lod=1017	NA	3q21.2	NA	NA	NA	NA	rs28402839	0.33	0.33	0.27	0.314297	0.339	0.4663	0.3112	0.1362	0.3753	0.33	0.5	0.3	0.14	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.25916	NA	NA	NA	NA	NA	0.217	NA	4.9943333
1153	12	15103693	15103693	G	C	intronic	ARHGDIB	NA	NA	NA	intronic	ENSG00000111348	NA	NA	NA	NA	NA	12p12.3	NA	Name=MEF2A,MEF2C_(SC-13268)	NA	NA	rs200943283	0.0009	0.0009	NA	0.00159744	0.002	NA	NA	NA	0.0061	0.0026	NA	NA	NA	0.0017	0.0026	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.269012	NA	NA	0.002093	0.000227	NA	NA	NA	4.994207
1153	1	220488188	220488188	G	A	intergenic	RAB3GAP2,MARK1	dist=42345;dist=213380	NA	NA	ncRNA_exonic	ENSG00000230318	NA	NA	NA	Score=533;Name=lod=195	NA	1q41	NA	NA	NA	NA	rs6702901	0.1	0.1	0.09	0.0940495	0.006	0.2133	0.0706	0.115	0.0501	0.01	0.24	0.03	0.12	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.021781	NA	NA	NA	NA	NA	0.08	NA	4.994
1153	7	944910	944910	G	A	intronic	ADAP1	NA	NA	NA	intronic	ENSG00000105963,ENSG00000240230	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	NA	NA	NA	0.031	0.0461262	0.006	NA	0.0173	0.1581	0.0041	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.357395	NA	NA	NA	NA	NA	0.007	NA	4.994
1153	11	122920597	122920597	G	A	intergenic	LOC341056,HSPA8	dist=30278;dist=7603	NA	NA	ncRNA_exonic	ENSG00000244641	NA	NA	NA	Score=621;Name=lod=444	NA	11q24.1	NA	NA	NA	NA	rs141823806	0.0018	0.0018	0.001	0.00159744	0.006	NA	0.0014	NA	0.001	0.004	NA	0.0028	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.279649	NA	NA	NA	NA	NA	0.007	NA	4.994
1153	17	21544587	21544587	A	G	intergenic	C17orf51,FAM27L	dist=89646;dist=280783	NA	NA	ncRNA_exonic	ENSG00000265019	NA	NA	NA	Score=626;Name=lod=468	NA	17p11.2	NA	NA	NA	NA	rs9285744	NA	NA	0.419	0.00179712	0.006	NA	0.0029	0.0008	NA	NA	NA	NA	NA	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.141015	NA	NA	NA	NA	NA	0.232	NA	4.994
1153	20	31763084	31763084	G	A	intronic	BPIFA2	NA	NA	NA	intronic	ENSG00000131050	NA	NA	NA	NA	NA	20q11.21	NA	Name=FOXA1_(SC-101058),FOXA2_(SC-6554),FOSL2,FOXA1_(C-20)	NA	NA	rs17124290	0.03	0.03	0.038	0.028155	0.006	NA	0.0058	0.0991	NA	0.01	NA	0.01	0.11	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.145355	NA	NA	NA	NA	NA	0.029	NA	4.994
1153	8	23060155	23060155	C	G	intronic	TNFRSF10A	NA	NA	NA	intronic	ENSG00000104689	NA	NA	NA	NA	NA	8p21.3	NA	Name=GR	NA	NA	rs182707081	0.0005	0.0005	NA	0.000399361	NA	NA	0.0014	0.0008	NA	NA	NA	0.0028	NA	0.0023	0.0037	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.124159	NA	NA	0.003721	0.001589	NA	NA	NA	4.993979
1153	20	20257958	20257958	C	T	exonic	C20orf26	NA	synonymous SNV	C20orf26:NM_015585:exon22:c.C2652T:p.S884S	exonic	ENSG00000089101	NA	synonymous SNV	ENSG00000089101:ENST00000377308:exon6:c.C720T:p.S240S,ENSG00000089101:ENST00000245957:exon22:c.C2652T:p.S884S,ENSG00000089101:ENST00000377309:exon22:c.C720T:p.S240S	NA	NA	20p11.23	NA	NA	NA	NA	rs2424317	0.13	0.13	0.127	0.133986	0.2296	0.004	0.2089	0.0976	0.1656	0.22	0.0035	0.2	0.09	0.1977	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.324994	1.324994	NA	0.245581	0.127553	NA	0.152	NA	4.9937856
1153	12	50611477	50611477	G	A	intronic	LIMA1	NA	NA	NA	ncRNA_exonic	ENSG00000257531	NA	NA	NA	Score=637;Name=lod=518	NA	12q13.12	NA	NA	NA	NA	rs12424691	0.31	0.31	0.304	0.34405	0.34	0.25	0.2565	0.3411	0.5112	0.33	0.27	0.26	0.37	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.016614	NA	NA	NA	NA	NA	0.268	NA	4.9933333
1153	12	50611617	50611617	G	A	intronic	LIMA1	NA	NA	NA	ncRNA_exonic	ENSG00000257531	NA	NA	NA	Score=637;Name=lod=518	NA	12q13.12	NA	NA	NA	NA	rs12424713	0.31	0.31	0.313	0.34385	0.34	0.25	0.2565	0.3404	0.5112	0.33	0.27	0.26	0.36	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.595551	NA	NA	NA	NA	NA	0.275	NA	4.9933333
1153	22	20838055	20838055	T	C	intronic	KLHL22	NA	NA	NA	ncRNA_exonic	ENSG00000236670	NA	NA	NA	Score=572;Name=lod=282	NA	22q11.21	NA	NA	NA	NA	rs5749793	0.39	0.39	0.389	0.355232	0.34	0.4583	0.2421	0.4236	0.2526	0.34	0.49	0.3	0.44	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.375968	2.375968	NA	NA	NA	NA	0.246	NA	4.9933333
1153	19	7964616	7964616	G	C	exonic	LRRC8E	NA	synonymous SNV	LRRC8E:NM_001268285:exon2:c.G822C:p.T274T,LRRC8E:NM_025061:exon3:c.G1209C:p.T403T,LRRC8E:NM_001268284:exon4:c.G1209C:p.T403T	exonic	ENSG00000171017,ENSG00000214248	NA	synonymous SNV	ENSG00000214248:ENST00000539278:exon1:c.C651G:p.G217G,ENSG00000171017:ENST00000306708:exon3:c.G1209C:p.T403T	NA	NA	19p13.2	NA	NA	NA	NA	rs45603833	0.13	0.13	0.098	0.091853	0.2485	0.001	0.2046	0.0151	0.0481	0.25	0.0017	0.23	0.01	0.1862	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.548141	NA	NA	0.238721	0.049251	NA	0.196	NA	4.9932456
1153	1	79520995	79520995	C	T	intergenic	ELTD1,NONE	dist=48500;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000230787	NA	NA	NA	Score=505;Name=lod=151	NA	1p31.1	NA	NA	NA	NA	rs147117301	0.0027	0.0027	0.003	0.00159744	0.007	NA	0.0014	NA	NA	0.01	NA	NA	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.231221	NA	NA	NA	NA	NA	NA	NA	4.993
1153	5	76842023	76842023	C	T	intergenic	WDR41,OTP	dist=53691;dist=82514	NA	NA	ncRNA_exonic	ENSG00000244019	NA	NA	NA	Score=796;Name=lod=2299	NA	5q13.3	NA	NA	NA	NA	rs114889682	0.02	0.02	0.013	0.0205671	0.007	NA	0.0173	0.0635	NA	0.01	NA	0.02	0.04	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.015144	NA	NA	NA	NA	NA	0.022	NA	4.993
1153	7	33039652	33039652	G	A	intronic	FKBP9	NA	NA	NA	intronic	ENSG00000105778,ENSG00000122642	NA	NA	NA	NA	NA	7p14.3	NA	NA	Name=2	NA	rs61259431	0.09	0.09	0.09	0.128395	0.007	0.1438	0.1441	0.1589	0.1851	0.01	0.15	0.11	0.16	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.592575	NA	NA	NA	NA	NA	0.145	NA	4.993
1153	8	125933341	125933341	A	T	intergenic	MTSS1,LOC157381	dist=192611;dist=20909	NA	NA	ncRNA_exonic	ENSG00000250428	NA	NA	NA	Score=469;Name=lod=107	NA	8q24.13	NA	NA	NA	NA	rs117926803	0.0037	0.0037	0.003	0.00259585	0.007	NA	0.0014	NA	0.0051	0.01	NA	0.0028	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.207998	NA	NA	NA	NA	NA	0.007	NA	4.993
1153	9	96212665	96212665	T	C	intronic	FAM120AOS	NA	NA	NA	intronic	ENSG00000188938	NA	NA	NA	NA	NA	9q22.31	NA	NA	Name=9	NA	rs182605932	0.0037	0.0037	NA	0.00359425	0.007	NA	0.013	NA	0.002	0.0026	NA	0.02	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.329507	NA	NA	NA	NA	NA	NA	NA	4.993
1153	14	22033064	22033064	C	G	intergenic	SALL2,OR10G3	dist=27727;dist=4870	NA	NA	ncRNA_exonic	ENSG00000256737	NA	NA	NA	Score=841;Name=lod=3499	NA	14q11.2	NA	NA	NA	NA	rs113343966	0.0027	0.0027	0.003	0.00219649	0.007	NA	0.0014	0.0015	0.001	0.01	NA	0.0028	0.002	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.197938	NA	NA	NA	NA	NA	NA	NA	4.993
1153	15	32059551	32059551	T	C	intergenic	OTUD7A,CHRNA7	dist=112009;dist=263135	NA	NA	ncRNA_exonic	ENSG00000259358	NA	NA	NA	Score=535;Name=lod=200	NA	15q13.3	NA	NA	NA	NA	rs190764595	0.0018	0.0018	NA	0.00239617	0.007	NA	0.0072	NA	NA	0.0026	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.651251	NA	NA	NA	NA	NA	NA	NA	4.993
1153	16	72763059	72763059	C	G	intergenic	PMFBP1,ZFHX3	dist=556710;dist=53727	NA	NA	ncRNA_exonic	ENSG00000261764	NA	NA	NA	Score=638;Name=lod=523	NA	16q22.2	NA	NA	NA	NA	rs151308392	0.01	0.01	0.005	0.00678914	0.007	NA	0.0014	0.0197	NA	0.01	NA	0.0028	0.02	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.205297	NA	NA	NA	NA	NA	NA	NA	4.993
1153	17	1518196	1518196	G	A	intronic	SLC43A2	NA	NA	NA	intronic	ENSG00000167703	NA	NA	NA	NA	NA	17p13.3	Score=920;Name=V$E47_01	NA	NA	NA	rs184830904	0.0018	0.0018	NA	0.00199681	0.007	NA	NA	NA	0.0031	0.01	NA	NA	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.263171	3.263171	NA	NA	NA	NA	NA	NA	4.993
1153	4	47682174	47682174	A	G	exonic	CORIN	NA	synonymous SNV	CORIN:NM_006587:exon8:c.T1116C:p.S372S	exonic	ENSG00000145244	NA	synonymous SNV	ENSG00000145244:ENST00000502252:exon7:c.T915C:p.S305S,ENSG00000145244:ENST00000508498:exon7:c.T699C:p.S233S,ENSG00000145244:ENST00000273857:exon8:c.T1116C:p.S372S	NA	NA	4p12	Score=867;Name=V$RORA1_01	NA	NA	NA	rs10517195	0.39	0.39	0.352	0.371006	0.5785	0.1319	0.5173	0.2549	0.4571	0.59	0.15	0.49	0.26	0.5021	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.052562	NA	NA	0.593372	0.30118	NA	0.362	NA	4.9926946
1153	3	55043515	55043515	G	A	intronic	CACNA2D3	NA	NA	NA	intronic	ENSG00000157445	NA	NA	NA	NA	NA	3p14.3	NA	Name=MafF_(M8194),MafK_(SC-477)	NA	NA	rs368600150	NA	NA	NA	0.000599042	0.003	NA	NA	NA	NA	NA	NA	NA	NA	0.0015	0.003	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.652314	NA	NA	0.003021	0.000521	NA	NA	NA	4.992479
1153	8	47884317	47884317	C	T	intergenic	LINC00293,LOC100287846	dist=116910;dist=216613	NA	NA	ncRNA_exonic	ENSG00000215179	NA	NA	NA	Score=806;Name=lod=2512	NA	8q11.1	NA	NA	NA	NA	rs181196861	0.01	0.01	NA	0.00479233	0.008	NA	0.0072	NA	0.0112	0.01	NA	0.02	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.763553	NA	NA	NA	NA	NA	NA	NA	4.992
1153	18	21891975	21891975	A	G	exonic	OSBPL1A	NA	synonymous SNV	OSBPL1A:NM_080597:exon13:c.T1065C:p.S355S	exonic	ENSG00000141447	NA	synonymous SNV	ENSG00000141447:ENST00000319481:exon13:c.T1065C:p.S355S	NA	NA	18q11.2	NA	NA	NA	NA	rs2337961	0.24	0.24	0.248	0.234026	0.2336	0.0625	0.1527	0.4455	0.183	0.25	0.06	0.19	0.46	0.2158	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.604078	NA	NA	0.225581	0.406037	ID=COSM1388103;OCCURENCE=1(large_intestine)	0.29	NA	4.9916856
1153	22	49103669	49103669	C	T	intronic	FAM19A5	NA	NA	NA	intronic	ENSG00000219438	NA	NA	NA	NA	NA	22q13.32	NA	NA	Name=3	NA	rs77372693	0.02	0.02	0.022	0.0269569	NA	NA	0.0058	0.0991	NA	NA	NA	0.01	0.09	0.0077	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.67695	NA	NA	0.001067	0.06859	NA	0.022	NA	4.991233
1153	1	2411501	2411501	G	A	intronic	PLCH2	NA	NA	NA	intronic	ENSG00000149527	NA	NA	NA	NA	NA	1p36.32	NA	NA	NA	NA	NA	NA	NA	NA	0.00199681	0.0089	NA	0.0014	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.224988	NA	NA	NA	NA	NA	0.007	NA	4.9911
1153	1	171731427	171731427	C	T	intergenic	VAMP4,METTL13	dist=20048;dist=19334	NA	NA	ncRNA_exonic	ENSG00000236741	NA	NA	NA	NA	NA	1q24.3	NA	Name=Pol2,NRSF,YY1,Pol2-4H8,E2F6,TAF1,USF-1,HEY1	NA	NA	rs114993143	0.0041	0.0041	0.002	0.00299521	0.0089	NA	0.0058	NA	0.002	0.01	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.621488	NA	NA	NA	NA	NA	NA	NA	4.9911
1153	16	1826323	1826323	T	C	downstream	EME2,SPSB3	NA	NA	NA	UTR3	ENSG00000197774	ENST00000561903:c.*84T>C,ENST00000564182:c.*84T>C	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	NA	NA	NA	NA	0.00259585	0.0089	NA	0.0058	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.615006	NA	NA	NA	NA	NA	NA	NA	4.9911
1153	19	21713559	21713559	A	G	intronic	ZNF429	NA	NA	NA	intronic	ENSG00000197013	NA	NA	NA	Score=340;Name=lod=32	NA	19p12	NA	NA	NA	NA	rs73548623	0.03	0.03	0.029	0.0305511	0.0089	0.0079	0.0072	0.0893	0.0133	0.01	0.01	0.01	0.08	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.630955	2.630955	NA	NA	NA	NA	0.036	NA	4.9911
1153	3	48414215	48414215	G	A	UTR5	FBXW12	NM_001159927:c.-43G>A,NM_207102:c.-43G>A	NA	NA	UTR5	ENSG00000164049	ENST00000296438:c.-43G>A,ENST00000415155:c.-43G>A	NA	NA	NA	NA	3p21.31	Score=793;Name=V$GFI1_01	NA	Name=2	NA	rs9815103	0.36	0.36	0.344	0.336861	0.4712	0.3413	0.3631	0.239	0.3078	0.46	0.33	0.37	0.24	0.3987	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.065711	NA	NA	0.472442	0.281207	NA	0.435	NA	4.9909914
1153	18	55983330	55983330	T	C	intronic	NEDD4L	NA	NA	NA	intronic	ENSG00000049759	NA	NA	NA	NA	NA	18q21.31	NA	Name=GABP,TCF4,FOXA1_(SC-101058),ELF1_(SC-631),RXRA,p300,c-Jun,c-Fos,ERalpha_a	Name=43	NA	rs2288774	0.52	0.52	0.523	0.492612	0.5189	0.3591	0.5072	0.652	0.3773	0.51	0.38	0.5	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.36905	NA	NA	0.490258	0.651734	ID=COSN165665;OCCURENCE=1(NS)	0.442	NA	4.990842
1153	5	140751128	140751128	C	G	exonic	PCDHGB3	NA	nonsynonymous SNV	PCDHGB3:NM_018924:exon1:c.C1167G:p.N389K,PCDHGB3:NM_032097:exon1:c.C1167G:p.N389K	exonic	ENSG00000262209	NA	nonsynonymous SNV	ENSG00000262209:ENST00000576222:exon1:c.C1167G:p.N389K	NA	NA	5q31.3	NA	NA	NA	NA	rs2240697	0.54	0.54	0.546	0.559305	0.4264	0.3274	0.6326	0.8994	0.4233	0.45	0.34	0.61	0.87	0.4824	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.64322	NA	NA	0.433729	0.836623	NA	0.565	NA	4.9908044
1153	7	102113260	102113260	C	T	intronic	LRWD1	NA	NA	NA	intronic	ENSG00000161036	NA	NA	NA	NA	NA	7q22.1	NA	Name=Pol2	NA	NA	rs145841715	0.0009	0.0009	0.003	0.000798722	0.003	NA	0.0014	NA	NA	0.0026	NA	NA	NA	0.0023	0.004	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.620517	NA	NA	0.003955	0.000908	NA	NA	NA	4.990745
1153	17	76449505	76449505	G	C	exonic	DNAH17	NA	synonymous SNV	DNAH17:NM_173628:exon65:c.C10449G:p.T3483T	exonic	ENSG00000187775	NA	synonymous SNV	ENSG00000187775:ENST00000389840:exon65:c.C10407G:p.T3469T,ENSG00000187775:ENST00000585328:exon65:c.C10434G:p.T3478T	Score=470;Name=lod=108	NA	17q25.3	NA	NA	NA	NA	rs2289751	0.53	0.53	0.516	0.466454	0.5994	0.6042	0.4798	0.3041	0.3978	0.61	0.59	0.53	0.33	0.5174	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.059741	NA	NA	0.559419	0.340218	NA	0.536	NA	4.9904476
1153	X	2832787	2832787	A	G	intronic	ARSD	NA	NA	NA	intronic	ENSG00000006756	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs73632954	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0096	NA	0.52	T	0.003	B	0.003	B	.	.	1.000	N	.	.	.	.	-1.006	T	0.038	T	.	-0.369	2.264	-0.417	-0.132	-0.091	2.906	-0.36857	NA	0.02	NA	NA	NA	NA	NA	4.9904
1153	11	720197	720197	C	T	exonic	EPS8L2	NA	synonymous SNV	EPS8L2:NM_022772:exon5:c.C301T:p.L101L	exonic	ENSG00000177106	NA	synonymous SNV	ENSG00000177106:ENST00000526198:exon4:c.C301T:p.L101L,ENSG00000177106:ENST00000318562:exon5:c.C301T:p.L101L,ENSG00000177106:ENST00000530636:exon5:c.C301T:p.L101L,ENSG00000177106:ENST00000524763:exon6:c.C301T:p.L101L,ENSG00000177106:ENST00000533256:exon6:c.C301T:p.L101L	NA	NA	11p15.5	Score=799;Name=V$GFI1_01	NA	NA	NA	rs3087546	0.48	0.48	0.487	0.491813	0.5457	0.2222	0.647	0.5651	0.5051	0.54	0.25	0.65	0.53	0.5451	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.616795	NA	NA	0.585698	0.53586	ID=COSM1561602;OCCURENCE=1(large_intestine)	0.413	NA	4.9901686
1153	10	37284011	37284011	G	A	intergenic	FZD8,ANKRD30A	dist=1353649;dist=130774	NA	NA	ncRNA_exonic	ENSG00000225355	NA	NA	NA	Score=534;Name=lod=197	NA	10p11.21	NA	NA	NA	NA	rs73238698	0.04	0.04	0.049	0.0515176	0.0099	NA	0.0159	0.1793	NA	0.01	NA	0.01	0.16	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.243132	NA	NA	NA	NA	NA	0.043	NA	4.9901
1153	11	98436622	98436622	G	A	intergenic	NONE,CNTN5	dist=NONE;dist=455084	NA	NA	ncRNA_exonic	ENSG00000254939	NA	NA	NA	Score=461;Name=lod=100	NA	11q22.1	NA	NA	NA	NA	rs182322682	0.0037	0.0037	NA	0.00339457	0.0099	NA	0.0072	0.0015	NA	0.01	NA	0.01	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.031514	NA	0.04	NA	NA	NA	0.058	NA	4.9901
1153	15	52536475	52536475	T	A	intronic	MYO5C	NA	NA	NA	intronic	ENSG00000128833	NA	NA	NA	NA	NA	15q21.2	NA	Name=ELF1_(SC-631)	NA	NA	rs56066716	0.07	0.07	0.064	0.0796725	0.0099	0.1012	0.0591	0.1611	0.0337	0.01	0.11	0.04	0.15	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.349922	NA	NA	NA	NA	NA	0.072	NA	4.9901
1153	15	79024731	79024731	G	A	intergenic	CHRNB4,LOC646938	dist=91144;dist=19648	NA	NA	ncRNA_exonic	ENSG00000261303	NA	NA	NA	Score=445;Name=lod=86	NA	15q25.1	NA	NA	NA	NA	rs57342652	0.02	0.02	0.014	0.0213658	0.0099	0.0228	0.0086	0.0318	0.0266	0.01	0.01	0.01	0.03	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.215734	NA	NA	NA	NA	NA	0.022	NA	4.9901
1153	1	241731956	241731956	T	A	intronic	KMO	NA	NA	NA	intronic	ENSG00000117009	NA	NA	NA	Score=563;Name=lod=258	NA	1q43	NA	NA	NA	NA	rs187112513	0.0005	0.0005	NA	0.000599042	0.002	NA	NA	NA	0.001	0.0013	NA	NA	NA	0.0029	0.0053	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.833045	3.833045	NA	0.005349	0.000454	NA	NA	NA	4.989751
1153	2	110321935	110321935	C	T	intronic	SEPT10	NA	NA	NA	intronic	ENSG00000186522	NA	NA	NA	NA	NA	2q13	NA	NA	Name=6	NA	rs199917466	NA	NA	NA	0.000199681	NA	NA	0.0014	NA	NA	NA	NA	NA	NA	0.0037	0.0067	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.248282	NA	NA	0.006676	0.001871	NA	NA	NA	4.989624
1153	14	104195346	104195346	G	A	intronic	ZFYVE21	NA	NA	NA	intronic	ENSG00000100711	NA	NA	NA	NA	NA	14q32.33	NA	NA	Name=9	NA	rs188852486	0.0009	0.0009	NA	0.000798722	0.004	NA	NA	NA	NA	0.0026	NA	NA	NA	0.0026	0.0038	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.811068	NA	NA	0.003837	0.000227	NA	NA	NA	4.989563
1153	14	88419374	88419374	T	C	intronic	GALC	NA	NA	NA	ncRNA_exonic	ENSG00000259096	NA	NA	NA	NA	NA	14q31.3	NA	NA	Name=7	NA	rs2236362	0.34	0.34	0.319	0.321286	0.3439	0.5327	0.4193	0.0454	0.3834	0.34	0.54	0.42	0.05	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.068199	NA	NA	NA	NA	NA	0.384	NA	4.9894333
1153	5	35039437	35039437	A	G	exonic	AGXT2	NA	synonymous SNV	AGXT2:NM_031900:exon3:c.T354C:p.H118H	exonic	ENSG00000113492	NA	synonymous SNV	ENSG00000113492:ENST00000231420:exon3:c.T354C:p.H118H,ENSG00000113492:ENST00000510428:exon3:c.T354C:p.H118H	Score=607;Name=lod=390	NA	5p13.2	NA	NA	NA	NA	rs2279651	0.44	0.44	0.451	0.399161	0.5815	0.2331	0.4121	0.4289	0.3333	0.59	0.23	0.48	0.43	0.4957	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.060242	NA	NA	0.600116	0.42079	NA	0.413	NA	4.9893506
1153	7	44612382	44612382	G	A	intronic	DDX56	NA	NA	NA	intronic	ENSG00000136271	NA	NA	NA	NA	NA	7p13	NA	Name=TR4	NA	NA	rs190166771	0.0018	0.0018	NA	0.00159744	0.005	NA	NA	NA	0.0031	0.01	NA	NA	NA	0.0032	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.861878	NA	NA	0.002558	0.001135	NA	NA	NA	4.989242
1153	1	120101412	120101412	C	A	intergenic	HSD3B1,HSD3BP4	dist=43731;dist=5091	NA	NA	ncRNA_exonic	ENSG00000239873	NA	NA	NA	Score=721;Name=lod=1134	NA	1p12	NA	NA	NA	NA	rs57709343	0.18	0.18	0.19	0.211462	0.0109	0.1042	0.0937	0.6309	0.045	0.004	0.09	0.08	0.64	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.130157	NA	NA	NA	NA	NA	0.203	NA	4.9891
1153	17	38635896	38635896	C	T	intronic	TNS4	NA	NA	NA	intronic	ENSG00000131746	NA	NA	NA	NA	NA	17q21.2	NA	Name=Pol2(b),Pol2	NA	NA	rs187606865	0.0023	0.0023	NA	0.00199681	0.005	NA	0.0072	NA	NA	0.0013	NA	0.01	NA	0.0024	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.056989	NA	NA	0.003605	0.001135	NA	NA	NA	4.988995
1153	12	79747441	79747441	C	T	intronic	SYT1	NA	NA	NA	ncRNA_intronic	ENSG00000257894	NA	NA	NA	NA	NA	12q21.2	NA	NA	Name=2	NA	rs11609641	0.06	0.06	0.047	0.0419329	0.1312	NA	0.0634	0.003	0.0307	0.14	NA	0.07	0.002	0.0868	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.057574	2.057574	NA	0.126395	0.023604	NA	0.022	NA	4.9889383
1153	1	185195953	185195953	C	T	intronic	SWT1	NA	NA	NA	ncRNA_exonic	ENSG00000213051	NA	NA	NA	Score=806;Name=lod=2511	NA	1q25.3	NA	NA	NA	NA	rs3766717	0.42	0.42	0.404	0.435304	0.3449	0.2768	0.3444	0.6982	0.4008	0.34	0.33	0.33	0.7	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.514959	NA	NA	NA	NA	NA	0.514	NA	4.9884333
1153	2	110942656	110942656	A	G	intronic	NPHP1	NA	NA	NA	ncRNA_exonic	ENSG00000233370	NA	NA	NA	Score=803;Name=lod=2446	NA	2q13	NA	NA	NA	NA	rs2018711	0.51	0.51	0.52	0.523962	0.3449	0.5942	0.415	0.6543	0.5368	0.33	0.58	0.48	0.7	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.919185	NA	NA	NA	NA	NA	0.449	NA	4.9884333
1153	2	110942694	110942694	T	C	intronic	NPHP1	NA	NA	NA	ncRNA_exonic	ENSG00000233370	NA	NA	NA	Score=803;Name=lod=2446	NA	2q13	NA	NA	NA	NA	rs1810097	0.51	0.51	0.519	0.523962	0.3449	0.5942	0.415	0.6543	0.5368	0.33	0.58	0.48	0.7	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.499674	1.499674	NA	NA	NA	NA	0.449	NA	4.9884333
1153	12	121017264	121017264	C	T	intronic	POP5	NA	NA	NA	intronic	ENSG00000167272	NA	NA	NA	NA	NA	12q24.31	NA	Name=Pol2-4H8,TAL1_(SC-12984)	Name=16	NA	rs2301456	0.28	0.28	0.263	0.258387	0.3519	0.2579	0.3934	0.059	0.3364	0.36	0.28	0.38	0.07	0.3211	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.641229	NA	NA	0.338837	0.096005	NA	0.246	NA	4.988163
1153	1	55590307	55590307	G	T	intronic	USP24	NA	NA	NA	intronic	ENSG00000162402	NA	NA	NA	NA	NA	1p32.3	NA	NA	Name=9	NA	rs17111650	0.03	0.03	0.039	0.0411342	NA	NA	0.013	0.149	NA	NA	NA	0.01	0.14	0.0116	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.907856	1.907856	NA	0.00024	0.113555	NA	0.043	NA	4.98816
1153	1	238654968	238654968	C	A	intergenic	LOC339535,CHRM3	dist=5651;dist=1137405	NA	NA	ncRNA_exonic	ENSG00000215149	NA	NA	NA	Score=561;Name=lod=255	NA	1q43	NA	NA	NA	NA	rs115398741	0.01	0.01	0.002	0.00459265	0.0119	NA	0.013	0.0015	NA	0.01	NA	0.01	0.0041	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.797331	NA	NA	NA	NA	NA	0.007	NA	4.9881
1153	1	238655577	238655577	G	A	intergenic	LOC339535,CHRM3	dist=6260;dist=1136796	NA	NA	ncRNA_exonic	ENSG00000215149	NA	NA	NA	Score=488;Name=lod=128	NA	1q43	NA	NA	NA	NA	rs115794711	0.01	0.01	0.004	0.00459265	0.0119	NA	0.013	0.0015	NA	0.01	NA	0.01	0.0041	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.729736	1.729736	NA	NA	NA	NA	0.007	NA	4.9881
1153	11	2356823	2356823	C	G	intergenic	TSPAN32,CD81	dist=17393;dist=41724	NA	NA	ncRNA_exonic	ENSG00000236264	NA	NA	NA	Score=735;Name=lod=1300	NA	11p15.5	NA	NA	NA	NA	rs72636998	0.02	0.02	NA	0.0307508	0.002	NA	0.0043	0.1127	NA	NA	NA	0.0028	0.1	0.0093	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.283749	NA	NA	0.00093	0.099455	NA	0.043	NA	4.98777
1153	17	39674540	39674540	A	G	intronic	KRT15	NA	NA	NA	intronic	ENSG00000171346	NA	NA	NA	NA	NA	17q21.2	NA	Name=MafF_(M8194),MafK_(SC-477),MafK_(ab50322)	Name=5	NA	rs3744784	0.22	0.22	0.228	0.20008	0.3519	0.0843	0.2032	0.1589	0.2168	0.37	0.07	0.25	0.16	0.2982	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.544018	NA	NA	0.362442	0.211984	NA	0.167	NA	4.987458
1153	19	22362527	22362527	C	A	UTR3	ZNF676	NM_001001411:c.*225G>T	NA	NA	UTR3	ENSG00000196109	ENST00000397121:c.*225G>T	NA	NA	Score=431;Name=lod=75	NA	19p12	NA	NA	NA	NA	rs1378915	0.41	0.41	0.385	0.442292	0.3459	0.3393	0.3689	0.6369	0.4366	0.35	0.32	0.36	0.66	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.093801	NA	NA	NA	NA	NA	0.399	NA	4.9874334
1153	5	138371116	138371116	G	A	intronic	SIL1	NA	NA	NA	ncRNA_exonic	ENSG00000242683	NA	NA	NA	Score=719;Name=lod=1111	NA	5q31.2	NA	NA	NA	NA	rs6890272	0.37	0.37	0.362	0.384784	0.3459	0.1577	0.3847	0.6331	0.3231	0.35	0.15	0.41	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.128824	NA	NA	NA	NA	NA	0.384	NA	4.9874333
1153	12	1867017	1867017	G	A	intronic	ADIPOR2	NA	NA	NA	ncRNA_exonic	ENSG00000243663	NA	NA	NA	Score=801;Name=lod=2399	NA	12p13.33	NA	NA	NA	NA	rs11061974	0.37	0.37	0.344	0.361821	0.3459	0.498	0.5187	0.1641	0.3937	0.33	0.51	0.49	0.2	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.896024	NA	NA	NA	NA	NA	0.261	NA	4.9874333
1153	7	42835653	42835653	A	C	intergenic	GLI3,C7orf25	dist=559035;dist=113219	NA	NA	ncRNA_exonic	ENSG00000229161	NA	NA	NA	Score=779;Name=lod=1959	NA	7p14.1	NA	NA	NA	NA	rs73688818	0.08	0.08	0.082	0.0884585	0.0129	NA	0.0303	0.3094	NA	0.01	NA	0.04	0.3	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.066099	NA	NA	NA	NA	NA	0.109	NA	4.9871
1153	8	22033913	22033913	C	G	intronic	BMP1	NA	NA	NA	intronic	ENSG00000168487	NA	NA	NA	NA	NA	8p21.3	NA	NA	Name=8	NA	rs117235783	0.01	0.01	0.011	0.0111821	0.0129	NA	0.0029	0.0083	0.0307	0.01	NA	0.01	0.01	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.808667	NA	NA	NA	NA	NA	NA	NA	4.9871
1153	9	80793290	80793290	T	C	intergenic	GNAQ,CEP78	dist=147071;dist=57701	NA	NA	ncRNA_exonic	ENSG00000233947	NA	NA	NA	Score=563;Name=lod=259	NA	9q21.2	NA	NA	NA	NA	rs140126094	0.01	0.01	0.003	0.00339457	0.0129	NA	0.0043	0.0008	NA	0.01	NA	0.01	0.002	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.650742	NA	NA	NA	NA	NA	NA	NA	4.9871
1153	9	80795335	80795335	A	G	intergenic	GNAQ,CEP78	dist=149116;dist=55656	NA	NA	ncRNA_exonic	ENSG00000228781	NA	NA	NA	Score=742;Name=lod=1379	NA	9q21.2	NA	NA	NA	NA	rs183258576	0.01	0.01	NA	0.00339457	0.0129	NA	0.0043	0.0008	NA	0.01	NA	0.01	0.002	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.047906	NA	NA	NA	NA	NA	NA	NA	4.9871
1153	1	89426813	89426813	C	T	intronic	CCBL2	NA	NA	NA	intronic	ENSG00000137944	NA	NA	NA	NA	NA	1p22.2	NA	Name=MafK_(ab50322)	NA	NA	rs6657572	0.03	0.03	0.024	0.0383387	0.002	NA	0.0159	0.1354	NA	0.0026	NA	0.02	0.1	0.0107	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.104796	3.104796	NA	0.000581	0.098956	NA	0.029	NA	4.986719
1153	5	446258	446258	C	A	intronic	EXOC3	NA	NA	NA	intronic	ENSG00000180104	NA	NA	NA	NA	NA	5p15.33	NA	NA	Name=2	NA	rs76038327	0.01	0.01	0.013	0.0179712	0.005	NA	0.0029	0.0507	0.0164	0.01	NA	0.0028	0.04	0.0084	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.467588	NA	NA	NA	NA	NA	0.036	NA	4.9866
1153	1	222705483	222705483	G	A	intronic	HHIPL2	NA	NA	NA	intronic	ENSG00000143512	NA	NA	NA	Score=419;Name=lod=67	NA	1q41	NA	NA	NA	NA	rs139585324	0.0023	0.0023	0	0.00159744	0.004	NA	0.0014	NA	0.0031	0.01	NA	0.0028	NA	0.0041	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.63339	3.63339	NA	0.005349	0.000454	NA	NA	NA	4.986551
1153	1	38332082	38332082	A	T	intronic	INPP5B	NA	NA	NA	intronic	ENSG00000204084	NA	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0135	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.206568	NA	NA	NA	NA	NA	NA	NA	4.9865
1153	2	159912703	159912703	A	G	intronic	TANC1	NA	NA	NA	ncRNA_exonic	ENSG00000226878	NA	NA	NA	Score=622;Name=lod=449	NA	2q24.2	NA	NA	NA	NA	rs34834895	0.18	0.18	0.16	0.135783	0.3469	0.003	0.2435	0.0303	0.1217	0.33	0.0017	0.3	0.04	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.224009	NA	NA	NA	NA	NA	0.254	NA	4.9864333
1153	17	73664712	73664712	A	G	intronic	SAP30BP	NA	NA	NA	intronic	ENSG00000161526	NA	NA	NA	NA	NA	17q25.1	NA	NA	Name=11	NA	rs16968161	0.03	0.03	0.026	0.0363419	NA	NA	0.0216	0.1263	NA	NA	NA	0.02	0.09	0.0124	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.857352	NA	NA	0.001279	0.128234	NA	0.036	NA	4.986321
1153	2	9621322	9621322	C	T	intronic	IAH1	NA	NA	NA	intronic	ENSG00000134330	NA	NA	NA	NA	NA	2p25.1	NA	NA	Name=65	NA	rs77857049	0.01	0.01	0.006	0.00539137	0.0139	NA	0.013	NA	0.0041	0.01	NA	0.02	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.702137	NA	NA	NA	NA	NA	NA	NA	4.9861
1153	6	7516934	7516934	C	A	intergenic	RIOK1,DSP	dist=98664;dist=24936	NA	NA	ncRNA_exonic	ENSG00000234115	NA	NA	NA	Score=557;Name=lod=244	NA	6p24.3	NA	NA	NA	NA	rs17142944	0.04	0.04	0.035	0.0541134	0.0139	0.0397	0.0245	0.1407	0.0143	0.01	0.02	0.02	0.13	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.136764	NA	NA	NA	NA	NA	0.072	NA	4.9861
1153	9	116613021	116613021	A	G	intergenic	RGS3,ZNF618	dist=252998;dist=25541	NA	NA	ncRNA_exonic	ENSG00000232905	NA	NA	NA	Score=417;Name=lod=66	NA	9q32	NA	NA	NA	NA	rs141402469	0.0027	0.0027	0.003	0.0061901	0.0139	0.001	0.0029	0.0015	0.0123	0.01	0.0017	NA	0.002	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.365644	NA	NA	NA	NA	NA	NA	NA	4.9861
1153	15	80767216	80767216	T	A	intronic	ARNT2	NA	NA	NA	intronic	ENSG00000172379	NA	NA	NA	NA	NA	15q25.1	NA	NA	Name=34	NA	rs56914848	0.1	0.1	0.095	0.113419	0.0139	0.122	0.049	0.2186	0.1104	0.01	0.15	0.04	0.2	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.406655	NA	NA	NA	NA	NA	0.087	NA	4.9861
1153	16	4927343	4927343	A	G	intronic	UBN1	NA	NA	NA	intronic	ENSG00000118900	NA	NA	NA	Score=443;Name=lod=84	NA	16p13.3	NA	NA	NA	NA	rs117377804	0.0027	0.0027	0.002	0.00239617	0.006	NA	0.0058	NA	0.002	0.01	NA	0.01	NA	0.0028	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.429128	3.429128	NA	0.005465	0.00091	NA	0.007	NA	4.985735
1153	12	50043022	50043022	C	T	intronic	FMNL3	NA	NA	NA	intronic	ENSG00000161791	NA	NA	NA	NA	NA	12q13.12	NA	NA	Name=7	NA	rs78481893	0.0037	0.0037	0.003	0.00359425	0.004	NA	0.0058	0.0061	0.002	0.01	NA	0.0028	0.01	0.0042	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.677079	NA	NA	0.006102	0.006983	NA	NA	NA	4.985698
1153	21	38850470	38850470	C	G	intronic	DYRK1A	NA	NA	NA	intronic	ENSG00000157540	NA	NA	NA	Score=706;Name=lod=990	NA	21q22.13	NA	NA	NA	NA	rs140466090	0.0023	0.0023	0.003	0.00219649	0.006	NA	0.0014	NA	0.0041	0.01	NA	0.0028	NA	0.0034	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.741531	3.741531	NA	0.005116	0.001816	NA	NA	NA	4.985484
1153	5	140784055	140784055	T	C	exonic	PCDHGA9	NA	synonymous SNV	PCDHGA9:NM_018921:exon1:c.T1536C:p.G512G,PCDHGA9:NM_032089:exon1:c.T1536C:p.G512G	exonic	ENSG00000261934	NA	synonymous SNV	ENSG00000261934:ENST00000573521:exon1:c.T1536C:p.G512G	NA	NA	5q31.3	NA	NA	NA	NA	rs3749770	0.29	0.29	0.29	0.309904	0.2018	0.1954	0.2608	0.528	0.2791	0.22	0.21	0.26	0.51	0.2574	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.960534	NA	NA	0.221985	0.492825	NA	0.297	NA	4.9854816
1153	2	113590390	113590390	G	A	exonic	IL1B	NA	synonymous SNV	IL1B:NM_000576:exon5:c.C315T:p.F105F	exonic	ENSG00000125538	NA	synonymous SNV	ENSG00000125538:ENST00000432018:exon4:c.C315T:p.F105F,ENSG00000125538:ENST00000263341:exon5:c.C315T:p.F105F,ENSG00000125538:ENST00000416750:exon5:c.C315T:p.F105F,ENSG00000125538:ENST00000418817:exon5:c.C315T:p.F105F	NA	NA	2q13	NA	NA	NA	NA	rs1143634	0.15	0.15	0.145	0.132788	0.2475	0.0228	0.1254	0.1225	0.1472	0.26	0.03	0.14	0.11	0.1964	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.161902	NA	NA	0.237442	0.139355	NA	0.13	NA	4.9853246
1153	11	32417962	32417962	A	G	intronic	WT1	NA	NA	NA	intronic	ENSG00000184937	NA	NA	NA	NA	NA	11p13	NA	Name=TR4	NA	NA	rs5030274	0.0018	0.0018	NA	0.00159744	0.004	NA	0.0058	NA	NA	0.0026	NA	0.01	NA	0.0044	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.208426	NA	NA	0.006281	0.002044	NA	NA	NA	4.985319
1153	19	41350507	41350507	T	C	intronic	CYP2A6	NA	NA	NA	intronic	ENSG00000255974,ENSG00000268797	NA	NA	NA	NA	NA	19q13.2	NA	NA	Name=2	NA	rs56164728	0.04	0.04	0.033	0.0463259	NA	NA	0.013	0.1687	NA	0.0013	NA	0.02	0.14	0.0141	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.282864	NA	NA	0.000581	0.144576	NA	0.051	NA	4.985319
1153	1	17953748	17953748	G	T	intronic	ARHGEF10L	NA	NA	NA	intronic	ENSG00000074964	NA	NA	NA	NA	NA	1p36.13	NA	NA	Name=2	NA	rs148863977	0.01	0.01	0.004	0.0125799	0.0149	NA	0.0216	0.003	0.0297	0.01	NA	0.02	0.0041	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.329186	NA	NA	NA	NA	NA	NA	NA	4.9851
1153	11	2411536	2411536	C	T	intronic	CD81	NA	NA	NA	intronic	ENSG00000110651	NA	NA	NA	NA	NA	11p15.5	NA	Name=E2F6	NA	NA	rs12291676	0.1	0.1	0.107	0.124201	0.0149	0.0317	0.0389	0.3805	0.046	0.01	0.02	0.04	0.37	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.284768	NA	NA	NA	NA	NA	0.138	NA	4.9851
1153	11	107779404	107779404	G	A	intergenic	SLC35F2,RAB39A	dist=49490;dist=19873	NA	NA	ncRNA_exonic	ENSG00000240652	NA	NA	NA	NA	NA	11q22.3	NA	Name=CTCF_(SC-5916)	NA	NA	rs9737070	0.05	0.05	0.053	0.067492	0.0149	0.0575	0.0245	0.1225	0.0879	0.01	0.05	0.02	0.13	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.773029	NA	NA	NA	NA	NA	0.043	NA	4.9851
1153	17	21207989	21207989	G	A	intronic	MAP2K3	NA	NA	NA	intronic	ENSG00000034152	NA	NA	NA	NA	NA	17p11.2	NA	Name=ZNF274	NA	NA	rs9893916	NA	NA	NA	0.0181709	0.0149	NA	0.0259	0.0424	0.002	NA	NA	NA	NA	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.470522	NA	NA	NA	NA	NA	0.507	NA	4.9851
1153	1	12919587	12919587	T	C	exonic	PRAMEF2	NA	synonymous SNV	PRAMEF2:NM_023014:exon3:c.T327C:p.D109D	exonic	ENSG00000120952	NA	synonymous SNV	ENSG00000120952:ENST00000240189:exon3:c.T327C:p.D109D	NA	NA	1p36.21	NA	NA	NA	NA	rs1063762	0.39	0.39	0.3	0.278355	0.2346	0.1885	0.281	0.4244	0.2168	0.37	0.35	0.43	0.43	0.2221	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.271065	NA	NA	0.224953	0.38995	NA	0.022	NA	4.9850136
1154	17	7990565	7990565	C	G	intronic	ALOX12B	NA	NA	NA	intronic	ENSG00000179477	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0152	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.63823	NA	NA	NA	NA	NA	NA	NA	4.9848
1154	12	52699548	52699548	T	C	exonic	KRT86	NA	synonymous SNV	KRT86:NM_002284:exon6:c.T1002C:p.A334A	exonic	ENSG00000170442	NA	synonymous SNV	ENSG00000170442:ENST00000293525:exon6:c.T1002C:p.A334A,ENSG00000170442:ENST00000544024:exon7:c.T1002C:p.A334A,ENSG00000170442:ENST00000423955:exon8:c.T1002C:p.A334A	NA	NA	12q13.13	NA	NA	NA	NA	rs2032360	0.36	0.36	0.397	0.455272	0.339	0.4921	0.3357	0.6467	0.363	0.25	0.43	0.31	0.48	0.3431	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.737978	NA	NA	NA	NA	NA	0.283	NA	4.9845666
1154	8	91094983	91094983	G	A	UTR5	CALB1	NM_004929:c.-58C>T	NA	NA	UTR5	ENSG00000104327	ENST00000265431:c.-58C>T	NA	NA	NA	NA	8q21.3	NA	Name=HMGN3,TAF1,E2F6_(H-50),Pol2,NRSF,Mxi1_(bHLH),Sin3Ak-20,HA-E2F1,HDAC2_(SC-6296),Pol2-4H8,Ini1,c-Myc,CCNT2,TBP	Name=83	NA	rs3087750	0.42	0.42	0.416	0.39976	0.6819	0.2847	0.4452	0.1649	0.5133	0.67	0.27	0.46	0.17	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.403748	NA	NA	0.666876	0.260838	ID=COSN168368;OCCURENCE=1(large_intestine)	0.42	NA	4.9845574
1154	22	45723854	45723854	C	G	exonic	FAM118A	NA	synonymous SNV	FAM118A:NM_017911:exon4:c.C432G:p.V144V,FAM118A:NM_001104595:exon5:c.C432G:p.V144V	exonic	ENSG00000100376	NA	synonymous SNV	ENSG00000100376:ENST00000405673:exon4:c.C432G:p.V144V,ENSG00000100376:ENST00000441876:exon4:c.C432G:p.V144V,ENSG00000100376:ENST00000216214:exon5:c.C432G:p.V144V	Score=627;Name=lod=473	NA	22q13.31	NA	NA	NA	NA	rs9615108	0.39	0.39	0.364	0.313299	0.5905	0.3006	0.5014	0.0371	0.2812	0.6	0.34	0.46	0.05	0.488	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.022452	NA	NA	0.603721	0.123922	NA	0.21	NA	4.9844456
1154	7	99500911	99500911	A	G	exonic	TRIM4	NA	synonymous SNV	TRIM4:NM_033091:exon5:c.T771C:p.S257S,TRIM4:NM_033017:exon6:c.T849C:p.S283S	exonic	ENSG00000146833	NA	synonymous SNV	ENSG00000146833:ENST00000349062:exon5:c.T771C:p.S257S,ENSG00000146833:ENST00000354241:exon5:c.T771C:p.S257S,ENSG00000146833:ENST00000355947:exon6:c.T849C:p.S283S	NA	NA	7q22.1	NA	NA	NA	NA	rs2247761	0.55	0.55	0.565	0.578674	0.5338	0.2976	0.4597	0.9039	0.5593	0.55	0.28	0.5	0.89	0.5653	0.89	1	T	.	.	.	.	.	.	1.000	P	.	.	3.96	T	-1.002	T	0.000	T	.	-1.669	0.012	1.25	-0.206	-0.126	8.215	-1.669101	NA	NA	0.583256	0.84453	NA	0.609	NA	4.9843106
1154	1	17959044	17959044	A	T	intronic	ARHGEF10L	NA	NA	NA	intronic	ENSG00000074964	NA	NA	NA	NA	NA	1p36.13	NA	Name=CTCF	NA	NA	rs115686702	0.03	0.03	0.031	0.0383387	0.0159	NA	0.0259	0.0976	0.0297	0.01	NA	0.03	0.1	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.236559	NA	NA	NA	NA	NA	0.043	NA	4.9841
1154	1	54483641	54483641	C	G	intronic	LDLRAD1	NA	NA	NA	intronic	ENSG00000203985	NA	NA	NA	Score=304;Name=lod=23	NA	1p32.3	NA	NA	NA	NA	rs74085130	0.09	0.09	0.099	0.0976438	0.0159	0.0427	0.0187	0.2973	0.0245	0.02	0.05	0.02	0.28	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.058572	NA	NA	NA	NA	NA	0.123	NA	4.9841
1154	1	236273405	236273405	G	T	intergenic	NID1,GPR137B	dist=44924;dist=32427	NA	NA	ncRNA_exonic	ENSG00000235371	NA	NA	NA	Score=540;Name=lod=209	NA	1q42.3	NA	NA	NA	NA	rs74891748	0.02	0.02	0.012	0.0199681	0.0159	0.0278	0.0115	0.0234	0.0174	0.02	0.02	0.02	0.01	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.316323	1.316323	NA	NA	NA	NA	0.007	NA	4.9841
1154	1	236274412	236274412	T	C	intergenic	NID1,GPR137B	dist=45931;dist=31420	NA	NA	ncRNA_exonic	ENSG00000235371	NA	NA	NA	Score=662;Name=lod=652	NA	1q42.3	NA	NA	NA	NA	rs12563733	0.02	0.02	0.01	0.0199681	0.0159	0.0278	0.0115	0.0234	0.0174	0.02	0.02	0.02	0.01	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.412055	NA	NA	NA	NA	NA	0.007	NA	4.9841
1154	4	6698567	6698567	G	A	intronic	S100P	NA	NA	NA	intronic	ENSG00000163993	NA	NA	NA	NA	NA	4p16.1	NA	NA	Name=32	NA	rs74666034	0.01	0.01	0.004	0.0109824	0.0159	NA	0.013	0.0008	0.0297	0.02	NA	0.01	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.348851	NA	NA	NA	NA	NA	NA	NA	4.9841
1154	8	125155234	125155234	T	C	intergenic	FER1L6,TMEM65	dist=22932;dist=167925	NA	NA	ncRNA_exonic	ENSG00000250727	NA	NA	NA	Score=637;Name=lod=518	NA	8q24.13	NA	NA	NA	NA	rs79753260	0.01	0.01	0.002	0.0141773	0.0159	0.001	0.0375	0.0015	0.0266	0.02	0.0035	0.04	0.0041	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.412841	NA	NA	NA	NA	NA	0.007	NA	4.9841
1154	2	234763226	234763226	C	T	upstream	HJURP	NA	NA	NA	upstream	ENSG00000123485	NA	NA	NA	NA	NA	2q37.1	NA	Name=TBP,IRF1,NF-YB,Oct-2,SETDB1,HEY1,ELF1_(SC-631),IRF3,TAF7_(SQ-8),HA-E2F1,Sin3Ak-20,c-Fos,Pol2-4H8,E2F1,SP1,Pol2,POU2F2,ELK4,E2F4,GABP,Pol2(b),TAF1,NF-YA	Name=148	NA	rs503913	0.65	0.65	0.597	0.598642	0.6829	0.7262	0.6931	0.4644	0.4949	0.67	0.77	0.67	0.46	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.822359	NA	NA	NA	NA	NA	0.667	NA	4.9837666
1154	1	35883962	35883962	G	A	intronic	ZMYM4	NA	NA	NA	intronic	ENSG00000146463	NA	NA	NA	NA	NA	1p34.3	NA	NA	Name=6	NA	rs16837341	0.05	0.05	0.052	0.0650958	0.0169	0.0188	0.0159	0.1868	0.0327	0.02	0.02	0.02	0.17	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.188823	NA	NA	NA	NA	NA	0.065	NA	4.9831
1154	9	101017371	101017371	C	T	intronic	TBC1D2	NA	NA	NA	intronic	ENSG00000095383	NA	NA	NA	NA	NA	9q22.33	NA	Name=Ini1	NA	NA	rs73488777	0.06	0.06	0.075	0.0708866	0.0169	0.001	0.0389	0.233	0.002	0.01	NA	0.03	0.24	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.602244	1.602244	NA	NA	NA	NA	0.043	NA	4.9831
1154	14	70028088	70028088	C	T	intergenic	PLEKHD1,CCDC177	dist=32873;dist=8443	NA	NA	ncRNA_exonic	ENSG00000244237	NA	NA	NA	Score=680;Name=lod=773	NA	14q24.1	NA	NA	NA	NA	rs74346423	0.04	0.04	0.044	0.0495208	0.0169	0.004	0.0245	0.1581	0.001	0.02	0.0017	0.02	0.14	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.234281	NA	NA	NA	NA	NA	0.094	NA	4.9831
1154	9	14801687	14801687	T	C	exonic	FREM1	NA	synonymous SNV	FREM1:NM_144966:exon21:c.A3657G:p.A1219A	exonic	ENSG00000164946	NA	synonymous SNV	ENSG00000164946:ENST00000380880:exon20:c.A3657G:p.A1219A,ENSG00000164946:ENST00000380875:exon21:c.A3657G:p.A1219A,ENSG00000164946:ENST00000380881:exon21:c.A3660G:p.A1220A,ENSG00000164946:ENST00000422223:exon21:c.A3657G:p.A1219A	NA	NA	9p22.3	NA	NA	NA	NA	rs10738380	0.17	0.17	0.157	0.176917	0.2336	0.2312	0.1945	0.0325	0.2454	0.23	0.24	0.16	0.02	0.2176	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.739158	NA	NA	0.232443	0.06148	NA	0.13	NA	4.9830236
1154	20	57767043	57767043	G	C	exonic	ZNF831	NA	synonymous SNV	ZNF831:NM_178457:exon1:c.G969C:p.A323A	exonic	ENSG00000124203	NA	synonymous SNV	ENSG00000124203:ENST00000371030:exon1:c.G969C:p.A323A	NA	NA	20q13.32	NA	NA	NA	NA	rs259984	0.34	0.34	0.27	0.360024	0.2356	0.3522	0.3141	0.5779	0.2342	0.25	0.3	0.29	0.58	0.2786	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.242139	NA	NA	0.169454	0.360325	ID=COSM1566187;OCCURENCE=1(large_intestine)	0.203	NA	4.9830126
1154	10	91470694	91470694	A	G	intronic	KIF20B	NA	NA	NA	intronic	ENSG00000138182	NA	NA	NA	NA	NA	10q23.31	NA	NA	Name=24	NA	rs76718061	0.0032	0.0032	0.004	0.00179712	0.0089	NA	NA	NA	NA	0.01	NA	NA	NA	0.0034	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.151415	NA	NA	0.004769	0.001362	NA	NA	NA	4.982931
1154	17	6663895	6663895	C	G	exonic	XAF1	NA	synonymous SNV	XAF1:NM_199139:exon3:c.C339G:p.R113R,XAF1:NM_017523:exon4:c.C396G:p.R132R	exonic	ENSG00000132530	NA	nonsynonymous SNV	ENSG00000132530:ENST00000574907:exon5:c.C494G:p.A165G	NA	NA	17p13.1	NA	NA	NA	NA	rs2271231	0.47	0.47	0.466	0.52496	0.3141	0.5813	0.3934	0.7383	0.4888	0.31	0.54	0.35	0.73	0.3964	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.632122	NA	NA	0.306628	0.611439	NA	0.399	NA	4.982872
1154	17	80045781	80045781	G	A	intronic	FASN	NA	NA	NA	intronic	ENSG00000169710	NA	NA	NA	NA	NA	17q25.3	NA	Name=Pol2	NA	NA	rs137954901	0.0009	0.0009	0.003	0.000998403	0.003	NA	NA	NA	0.002	0.0026	NA	NA	NA	0.0055	0.0089	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.525838	NA	NA	0.00885	0.001365	NA	NA	NA	4.98265
1154	7	65951419	65951419	A	G	intergenic	LINC00174,LOC493754	dist=86024;dist=67134	NA	NA	ncRNA_intronic	ENSG00000230189,ENSG00000244510,ENSG00000244657	NA	NA	NA	Score=289;Name=lod=20	NA	7q11.21	NA	NA	NA	NA	rs144605345	0.01	0.01	0.006	0.00479233	0.0179	NA	0.0072	0.0008	NA	0.02	NA	0.01	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.574185	NA	NA	NA	NA	NA	NA	NA	4.9821
1154	17	79813228	79813228	C	T	intronic	P4HB	NA	NA	NA	intronic	ENSG00000185624	NA	NA	NA	NA	NA	17q25.3	NA	NA	Name=34	NA	rs148345851	0.01	0.01	0.006	0.00479233	0.0179	NA	0.0014	0.0023	0.002	0.02	NA	NA	0.01	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.083652	NA	NA	NA	NA	NA	NA	NA	4.9821
1154	1	24140642	24140642	C	T	intronic	HMGCL	NA	NA	NA	intronic	ENSG00000117305	NA	NA	NA	NA	NA	1p36.11	NA	NA	Name=10	NA	rs137992708	0.0027	0.0027	0.003	0.00299521	0.0089	NA	0.0029	0.0015	0.002	0.01	NA	0.0028	NA	0.0031	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.647873	NA	NA	0.00593	0.002043	NA	NA	NA	4.98207
1154	7	142460238	142460238	G	A	intronic	PRSS1	NA	NA	NA	intronic	ENSG00000204983	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	NA	NA	NA	0.118	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.018	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.207814	NA	NA	NA	NA	NA	0.007	NA	4.982
1154	5	150518386	150518386	G	A	intronic	ANXA6	NA	NA	NA	intronic	ENSG00000197043	NA	NA	NA	NA	NA	5q33.1	NA	NA	Name=2	NA	rs148683104	0.0027	0.0027	0.002	0.00299521	0.008	NA	0.0086	0.0008	NA	0.004	NA	0.01	NA	0.0049	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.580285	1.580285	NA	0.005205	0.000261	NA	NA	NA	4.981895
1154	9	18661893	18661893	C	T	intronic	ADAMTSL1	NA	NA	NA	intronic	ENSG00000178031	NA	NA	NA	NA	NA	9p22.1	NA	Name=p300,STAT1	NA	NA	rs184592772	0.0041	0.0041	NA	0.00279553	0.0099	NA	0.0014	NA	0.0031	0.01	NA	NA	NA	0.0055	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.725076	1.725076	NA	0.002791	0.000454	NA	NA	NA	4.981809
1154	1	36937059	36937059	A	G	exonic	CSF3R	NA	synonymous SNV	CSF3R:NM_000760:exon10:c.T1260C:p.T420T,CSF3R:NM_156039:exon10:c.T1260C:p.T420T,CSF3R:NM_172313:exon10:c.T1260C:p.T420T	exonic	ENSG00000119535	NA	synonymous SNV	ENSG00000119535:ENST00000331941:exon8:c.T1260C:p.T420T,ENSG00000119535:ENST00000338937:exon8:c.T1260C:p.T420T,ENSG00000119535:ENST00000418048:exon8:c.T1260C:p.T420T,ENSG00000119535:ENST00000440588:exon8:c.T1260C:p.T420T,ENSG00000119535:ENST00000361632:exon9:c.T1260C:p.T420T,ENSG00000119535:ENST00000373103:exon10:c.T1260C:p.T420T,ENSG00000119535:ENST00000373104:exon10:c.T1260C:p.T420T,ENSG00000119535:ENST00000373106:exon10:c.T1260C:p.T420T	NA	NA	1p34.3	NA	NA	NA	NA	rs3917981	0.53	0.53	0.505	0.592452	0.5666	0.4484	0.4006	0.736	0.7096	0.57	0.4	0.46	0.67	0.5648	0.72	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.994	T	0.000	T	.	-1.272	0.044	-0.181	-0.619	-0.839	1.237	-1.272378	NA	NA	0.553488	0.716069	NA	0.507	NA	4.9817786
1154	19	14991643	14991643	G	A	exonic	OR7A17	NA	synonymous SNV	OR7A17:NM_030901:exon1:c.C525T:p.P175P	exonic	ENSG00000185385	NA	synonymous SNV	ENSG00000185385:ENST00000327462:exon1:c.C525T:p.P175P	NA	NA	19p13.12	NA	NA	NA	NA	rs10401818	0.3	0.3	0.305	0.277556	0.2356	0.2867	0.2349	0.438	0.1247	0.25	0.29	0.23	0.44	0.2234	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.579669	NA	NA	0.226163	0.391058	NA	0.348	NA	4.9815036
1154	9	139371342	139371342	G	A	exonic	SEC16A	NA	synonymous SNV	SEC16A:NM_001276418:exon2:c.C726T:p.P242P,SEC16A:NM_014866:exon3:c.C726T:p.P242P	exonic	ENSG00000148396	NA	synonymous SNV	ENSG00000148396:ENST00000290037:exon1:c.C192T:p.P64P,ENSG00000148396:ENST00000313050:exon1:c.C726T:p.P242P,ENSG00000148396:ENST00000371706:exon1:c.C192T:p.P64P,ENSG00000148396:ENST00000431893:exon1:c.C192T:p.P64P	NA	NA	9q34.3	NA	NA	NA	NA	rs11999525	0.15	0.15	0.143	0.132388	0.2396	0.0546	0.2493	0.0454	0.137	0.24	0.07	0.22	0.05	0.2001	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.128519	NA	NA	0.245493	0.073055	ID=COSM455603,COSM455602;OCCURENCE=1(breast)	0.123	NA	4.9814736
1154	12	78225110	78225110	T	C	UTR5	NAV3	NM_014903:c.-132T>C	NA	NA	UTR5	ENSG00000067798	ENST00000549464:c.-132T>C,ENST00000266692:c.-132T>C,ENST00000228327:c.-132T>C,ENST00000397909:c.-132T>C,ENST00000536525:c.-132T>C	NA	NA	Score=457;Name=lod=96	NA	12q21.2	NA	NA	NA	NA	rs12227066	0.33	0.33	0.323	0.316494	0.3519	0.5337	0.2911	0.0908	0.3793	0.37	0.52	0.28	0.1	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.886457	1.886457	NA	NA	NA	NA	0.275	NA	4.9814334
1154	6	162989826	162989826	G	A	intronic	PARK2	NA	NA	NA	ncRNA_exonic	ENSG00000227913	NA	NA	NA	Score=695;Name=lod=892	NA	6q26	NA	NA	NA	NA	rs10945846	0.34	0.34	0.303	0.326478	0.3519	0.497	0.3156	0.1558	0.363	0.34	0.51	0.34	0.15	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.436683	NA	NA	NA	NA	NA	0.304	NA	4.9814333
1154	6	162990703	162990703	G	A	intronic	PARK2	NA	NA	NA	ncRNA_exonic	ENSG00000227913	NA	NA	NA	Score=538;Name=lod=205	NA	6q26	NA	NA	NA	NA	rs12215884	0.34	0.34	0.297	0.326478	0.3519	0.497	0.3156	0.1558	0.363	0.34	0.51	0.34	0.15	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.12129	NA	NA	NA	NA	NA	0.297	NA	4.9814333
1154	9	140508684	140508684	T	C	intronic	ARRDC1	NA	NA	NA	intronic	ENSG00000197070	NA	NA	NA	NA	NA	9q34.3	NA	Name=Pol2	NA	NA	rs10124016	0.02	0.02	0.02	0.0357428	0.005	NA	0.0086	0.1271	NA	0.0013	NA	0.01	0.1	0.0116	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.528319	NA	NA	0.001977	0.102587	NA	0.051	NA	4.981423
1154	14	50517672	50517672	T	C	intergenic	C14orf182,C14orf183	dist=43434;dist=32697	NA	NA	ncRNA_exonic	ENSG00000270788	NA	NA	NA	Score=570;Name=lod=276	NA	14q21.3	NA	NA	NA	NA	rs75035953	0.01	0.01	0.005	0.00539137	0.0189	NA	0.0058	0.0015	0.002	0.02	NA	0.0028	0.002	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.539122	2.539122	NA	NA	NA	NA	0.007	NA	4.9811
1154	9	36003094	36003094	G	C	intergenic	OR2S2,RECK	dist=44943;dist=33816	NA	NA	ncRNA_exonic	ENSG00000243641	NA	NA	NA	Score=403;Name=lod=58	NA	9p13.3	NA	NA	NA	NA	rs147267725	0.01	0.01	0.004	0.00359425	0.0129	NA	0.0058	0.0008	NA	0.01	NA	0.01	NA	0.0061	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.168186	NA	NA	NA	NA	NA	0.007	NA	4.981
1154	4	114213561	114213561	G	A	intronic	ANK2	NA	NA	NA	intronic	ENSG00000145362	NA	NA	NA	NA	NA	4q26	NA	Name=NANOG_(SC-33759)	NA	NA	rs146312675	0.0027	0.0027	0.003	0.00119808	0.006	NA	NA	NA	NA	0.01	NA	0.0028	NA	0.006	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.687575	1.687575	NA	0.007095	0.001362	NA	NA	NA	4.980905
1154	1	173474429	173474429	T	C	exonic	SLC9C2	NA	synonymous SNV	SLC9C2:NM_178527:exon26:c.A3267G:p.Q1089Q	exonic	ENSG00000162753	NA	synonymous SNV	ENSG00000162753:ENST00000367714:exon26:c.A3267G:p.Q1089Q	NA	NA	1q25.1	NA	NA	NA	NA	rs12026637	0.29	0.29	0.241	0.304313	0.2087	0.6448	0.3213	0.0136	0.4325	0.22	0.62	0.3	0.02	0.2702	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.010015	NA	NA	0.207209	0.048116	NA	0.203	NA	4.9805576
1154	1	197112533	197112533	G	A	exonic	ASPM	NA	synonymous SNV	ASPM:NM_001206846:exon3:c.C849T:p.S283S,ASPM:NM_018136:exon3:c.C849T:p.S283S	exonic	ENSG00000066279	NA	synonymous SNV	ENSG00000066279:ENST00000294732:exon3:c.C849T:p.S283S,ENSG00000066279:ENST00000367409:exon3:c.C849T:p.S283S	NA	NA	1q31.3	NA	NA	Name=12	NA	rs6677082	0.8	0.8	0.762	0.755591	0.9095	0.9831	0.8746	0.295	0.9008	0.92	0.99	0.89	0.33	0.8698	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.482792	NA	NA	0.906839	0.387199	NA	0.681	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000081938.1;CLNDSDB=.;CLNDSDBID=.	4.9805276
1154	1	79987731	79987731	G	A	intergenic	ELTD1,NONE	dist=515236;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000232676	NA	NA	NA	Score=804;Name=lod=2460	NA	1p31.1	NA	NA	NA	NA	rs140314886	0.01	0.01	0.008	0.0061901	0.0199	NA	0.0144	0.0008	NA	0.02	NA	0.01	0.002	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.743326	NA	NA	NA	NA	NA	0.007	NA	4.9801
1154	3	120525389	120525389	T	G	intergenic	GTF2E1,STXBP5L	dist=23473;dist=101661	NA	NA	ncRNA_exonic	ENSG00000213371	NA	NA	NA	Score=749;Name=lod=1471	NA	3q13.33	NA	NA	NA	NA	rs76579440	0.01	0.01	0.009	0.00958466	0.0199	NA	0.0187	NA	0.0153	0.02	NA	0.02	NA	NA	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.144456	NA	NA	NA	NA	NA	0.022	NA	4.9801
1154	3	120525556	120525556	G	C	intergenic	GTF2E1,STXBP5L	dist=23640;dist=101494	NA	NA	ncRNA_exonic	ENSG00000213371	NA	NA	NA	Score=528;Name=lod=187	NA	3q13.33	NA	NA	NA	NA	rs115209237	0.01	0.01	0.009	0.00958466	0.0199	NA	0.0187	NA	0.0153	0.02	NA	0.02	NA	NA	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.252799	NA	NA	NA	NA	NA	0.022	NA	4.9801
1154	10	94675757	94675757	T	C	intronic	EXOC6	NA	NA	NA	intronic	ENSG00000138190	NA	NA	NA	NA	NA	10q23.33	NA	Name=YY1_(C-20)	NA	NA	rs61862282	0.02	0.02	0.024	0.0205671	0.0199	NA	0.0187	0.0439	0.0123	0.02	NA	0.02	0.05	NA	0.054	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.018845	NA	NA	NA	NA	NA	0.036	NA	4.9801
1154	16	4752134	4752134	A	G	exonic	ANKS3	NA	synonymous SNV	ANKS3:NM_001242929:exon6:c.T657C:p.D219D,ANKS3:NM_133450:exon9:c.T978C:p.D326D	exonic	ENSG00000168096	NA	synonymous SNV	ENSG00000168096:ENST00000586166:exon4:c.T360C:p.D120D,ENSG00000168096:ENST00000450067:exon5:c.T360C:p.D120D,ENSG00000168096:ENST00000586605:exon5:c.T459C:p.D153D,ENSG00000168096:ENST00000592421:exon6:c.T657C:p.D219D,ENSG00000168096:ENST00000446014:exon7:c.T591C:p.D197D,ENSG00000168096:ENST00000585773:exon7:c.T759C:p.D253D,ENSG00000168096:ENST00000304283:exon9:c.T978C:p.D326D	NA	NA	16p13.3	Score=756;Name=V$HOX13_01	NA	NA	NA	rs841210	0.58	0.58	0.582	0.529952	0.5557	0.6478	0.5331	0.475	0.454	0.56	0.69	0.53	0.53	0.5566	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.321713	NA	NA	0.574302	0.515476	NA	0.377	NA	4.9800646
1154	8	120790304	120790304	T	C	exonic	TAF2	NA	synonymous SNV	TAF2:NM_003184:exon18:c.A2319G:p.T773T	exonic	ENSG00000064313	NA	synonymous SNV	ENSG00000064313:ENST00000378164:exon18:c.A2319G:p.T773T	Score=627;Name=lod=469	NA	8q24.12	NA	NA	NA	NA	rs1509348	0.57	0.57	0.555	0.545927	0.5527	0.4296	0.6585	0.6793	0.3988	0.56	0.42	0.64	0.7	0.5695	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.890214	NA	NA	0.564644	0.679545	NA	0.703	NA	4.9798226
1154	16	58542901	58542901	G	A	exonic	NDRG4	NA	synonymous SNV	NDRG4:NM_001242834:exon11:c.G819A:p.T273T,NDRG4:NM_001242835:exon11:c.G765A:p.T255T,NDRG4:NM_001242836:exon11:c.G765A:p.T255T,NDRG4:NM_001242833:exon12:c.G855A:p.T285T,NDRG4:NM_001130487:exon13:c.G921A:p.T307T,NDRG4:NM_020465:exon13:c.G861A:p.T287T,NDRG4:NM_022910:exon13:c.G861A:p.T287T	exonic	ENSG00000103034	NA	synonymous SNV	ENSG00000103034:ENST00000562999:exon11:c.G765A:p.T255T,ENSG00000103034:ENST00000563799:exon11:c.G819A:p.T273T,ENSG00000103034:ENST00000566192:exon11:c.G765A:p.T255T,ENSG00000103034:ENST00000568640:exon11:c.G819A:p.T273T,ENSG00000103034:ENST00000569923:exon11:c.G600A:p.T200T,ENSG00000103034:ENST00000570248:exon11:c.G765A:p.T255T,ENSG00000103034:ENST00000356752:exon12:c.G855A:p.T285T,ENSG00000103034:ENST00000258187:exon13:c.G861A:p.T287T,ENSG00000103034:ENST00000394279:exon13:c.G861A:p.T287T,ENSG00000103034:ENST00000394282:exon13:c.G921A:p.T307T	NA	NA	16q21	NA	NA	NA	NA	rs867583	0.34	0.34	0.347	0.358826	0.2127	0.5694	0.2392	0.379	0.3497	0.2	0.58	0.21	0.38	0.2748	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.322675	NA	NA	0.199535	0.374431	NA	0.304	NA	4.9796316
1154	2	71058226	71058226	C	T	exonic	CD207	NA	synonymous SNV	CD207:NM_015717:exon6:c.G942A:p.T314T	exonic	ENSG00000116031	NA	synonymous SNV	ENSG00000116031:ENST00000410009:exon6:c.G942A:p.T314T	NA	NA	2p13.3	NA	NA	NA	NA	rs2080390	0.14	0.14	0.129	0.13758	0.2197	0.0794	0.2406	0.0386	0.1738	0.22	0.07	0.21	0.05	0.2174	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.370122	NA	NA	0.24994	0.064425	NA	0.101	NA	4.9796266
1154	8	21862551	21862551	A	G	exonic	XPO7	NA	synonymous SNV	XPO7:NM_015024:exon28:c.A3216G:p.S1072S	exonic	ENSG00000130227	NA	synonymous SNV	ENSG00000130227:ENST00000252512:exon28:c.A3216G:p.S1072S,ENSG00000130227:ENST00000433566:exon28:c.A3219G:p.S1073S,ENSG00000130227:ENST00000434536:exon28:c.A3243G:p.S1081S	Score=676;Name=lod=743	NA	8p21.3	NA	NA	NA	NA	rs1058486	0.59	0.59	0.604	0.577875	0.5994	0.5268	0.4352	0.7632	0.4591	0.6	0.53	0.47	0.75	0.5342	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.16057	NA	NA	0.553725	0.729763	NA	0.775	NA	4.9793416
1154	2	218625836	218625836	C	T	intergenic	DIRC3,TNS1	dist=4520;dist=38676	NA	NA	ncRNA_exonic	ENSG00000231035	NA	NA	NA	Score=629;Name=lod=481	NA	2q35	NA	NA	NA	NA	rs62183684	0.01	0.01	0.008	0.00778754	0.0209	0.001	0.0058	0.0008	0.0123	0.02	0.0017	0.01	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.565403	NA	NA	NA	NA	NA	NA	NA	4.9791
1154	6	28483482	28483482	A	C	exonic	GPX6	NA	unknown	UNKNOWN	exonic	ENSG00000198704	NA	unknown	UNKNOWN	NA	NA	6p22.1	NA	NA	NA	NA	rs406113	0.49	0.49	0.507	0.491813	0.329	0.5149	0.402	0.7466	0.3548	0.32	0.53	0.41	0.77	0.3792	0.77	1	T	0.0	B	0.0	B	0.909	N	1.000	P	-1.765	N	4.48	T	-0.916	T	0.001	T	0.149	-1.211	0.067	1.48	0.067	0.141	4.347	-1.210846	NA	NA	0.313056	0.66844	NA	0.449	NA	4.978744
1154	22	45943093	45943093	G	A	intronic	FBLN1	NA	NA	NA	intronic	ENSG00000077942	NA	NA	NA	NA	NA	22q13.31	NA	NA	Name=2	NA	rs142798380	0.0037	0.0037	0.003	0.00219649	0.0099	NA	0.0014	NA	NA	0.01	NA	NA	NA	0.0036	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.18548	NA	NA	0.007907	0.001135	NA	NA	NA	4.978593
1154	6	150116626	150116626	C	T	intronic	PCMT1	NA	NA	NA	ncRNA_exonic	ENSG00000219433	NA	NA	NA	Score=707;Name=lod=996	NA	6q25.1	NA	NA	NA	NA	rs3805752	0.46	0.46	0.409	0.431909	0.3549	0.8234	0.6037	0.1415	0.3783	0.35	0.8	0.57	0.17	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.351472	NA	NA	NA	NA	NA	0.478	NA	4.9784333
1154	11	13410371	13410371	A	G	UTR3	BTBD10	NM_032320:c.*7T>C	NA	NA	UTR3	ENSG00000148925	ENST00000278174:c.*7T>C,ENST00000527102:c.*737T>C,ENST00000530907:c.*7T>C,ENST00000528120:c.*7T>C	NA	NA	Score=537;Name=lod=203	NA	11p15.2	NA	NA	NA	NA	rs17452383	0.09	0.09	0.091	0.0828674	0.1243	0.0635	0.0778	0.0847	0.0613	0.12	0.05	0.09	0.09	0.1074	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.643468	1.643468	NA	0.123428	0.091591	NA	0.087	NA	4.9782054
1154	9	14775859	14775859	G	A	exonic	FREM1	NA	synonymous SNV	FREM1:NM_001177704:exon2:c.C393T:p.A131A,FREM1:NM_144966:exon26:c.C4785T:p.A1595A	exonic	ENSG00000164946	NA	synonymous SNV	ENSG00000164946:ENST00000380894:exon2:c.C393T:p.A131A,ENSG00000164946:ENST00000380880:exon25:c.C4785T:p.A1595A,ENSG00000164946:ENST00000380881:exon26:c.C4788T:p.A1596A,ENSG00000164946:ENST00000422223:exon26:c.C4785T:p.A1595A	Score=403;Name=lod=58	NA	9p22.3	NA	NA	NA	NA	rs10733289	0.41	0.41	0.376	0.416733	0.5845	0.3294	0.4366	0.2905	0.4908	0.59	0.33	0.41	0.23	0.5101	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.321385	NA	NA	0.593915	0.3596	NA	0.406	NA	4.9781516
1154	7	149558409	149558409	G	C	exonic	ZNF862	NA	synonymous SNV	ZNF862:NM_001099220:exon7:c.G2160C:p.L720L	exonic	ENSG00000106479	NA	synonymous SNV	ENSG00000106479:ENST00000223210:exon7:c.G2160C:p.L720L	Score=433;Name=lod=77	NA	7q36.1	NA	NA	NA	NA	rs2240361	0.43	0.43	0.419	0.380591	0.5865	0.3284	0.4741	0.2405	0.3456	0.58	0.36	0.49	0.23	0.5024	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.36617	NA	NA	0.599643	0.33913	NA	0.464	NA	4.9781236
1154	3	148704618	148704618	T	C	intergenic	CPA3,GYG1	dist=89746;dist=4577	NA	NA	ncRNA_exonic	ENSG00000241627	NA	NA	NA	Score=734;Name=lod=1277	NA	3q24	NA	NA	NA	NA	rs62622498	0.01	0.01	0.006	0.0185703	0.0219	0.001	0.0173	0.0008	0.0583	0.03	0.0017	0.03	NA	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.726323	NA	NA	NA	NA	NA	0.022	NA	4.9781
1154	12	58638450	58638450	C	T	intergenic	XRCC6BP1,LRIG3	dist=287398;dist=627487	NA	NA	ncRNA_exonic	ENSG00000241423	NA	NA	NA	Score=707;Name=lod=1000	NA	12q14.1	NA	NA	NA	NA	rs11610099	0.01	0.01	0.008	0.00539137	0.0219	NA	0.0043	NA	0.002	0.02	NA	0.01	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.054313	NA	NA	NA	NA	NA	0.007	NA	4.9781
1154	6	131992549	131992549	G	A	intronic	ENPP3	NA	NA	NA	intronic	ENSG00000154269	NA	NA	NA	NA	NA	6q23.2	NA	NA	Name=5	NA	rs10080319	0.08	0.08	0.09	0.0910543	0.0219	0.001	0.0403	0.2814	0.0337	0.02	NA	0.03	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.559229	NA	NA	NA	NA	NA	0.13	NA	4.9781
1154	9	140669541	140669541	C	T	intronic	EHMT1	NA	NA	NA	intronic	ENSG00000181090	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs12341990	0.05	0.05	0.052	0.0577077	0.004	NA	0.0202	0.205	NA	NA	NA	0.02	0.19	0.0165	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.760445	3.760445	NA	0.002093	0.161825	NA	0.08	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000082219.1;CLNDSDB=.;CLNDSDBID=.	4.977407
1154	11	59623433	59623433	G	A	exonic	TCN1	NA	synonymous SNV	TCN1:NM_001062:exon6:c.C846T:p.S282S	exonic	ENSG00000134827	NA	synonymous SNV	ENSG00000134827:ENST00000257264:exon6:c.C846T:p.S282S	NA	NA	11q12.1	NA	NA	NA	NA	rs1042613	0.27	0.27	0.276	0.297724	0.2266	0.1607	0.1556	0.5484	0.274	0.22	0.19	0.18	0.48	0.2419	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.111149	NA	NA	0.220955	0.462517	ID=COSM147255;OCCURENCE=1(stomach)	0.319	NA	4.9772116
1154	4	85465661	85465661	T	C	intergenic	NKX6-1,CDS1	dist=46274;dist=38396	NA	NA	ncRNA_exonic	ENSG00000258013	NA	NA	NA	Score=410;Name=lod=62	NA	4q21.23	NA	NA	NA	NA	rs116740990	0.01	0.01	0.008	0.00579073	0.0229	NA	0.0086	NA	NA	0.03	NA	0.01	NA	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.394255	NA	NA	NA	NA	NA	NA	NA	4.9771
1154	6	132102381	132102381	C	G	intergenic	ENPP3,ENPP1	dist=33831;dist=26775	NA	NA	ncRNA_exonic	ENSG00000216917	NA	NA	NA	Score=777;Name=lod=1917	NA	6q23.2	NA	NA	NA	NA	rs79100646	0.01	0.01	0.014	0.0125799	0.0229	NA	0.0086	0.0136	0.0164	0.03	NA	0.01	0.01	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.037366	NA	NA	NA	NA	NA	0.007	NA	4.9771
1154	16	81941493	81941493	T	C	intronic	PLCG2	NA	NA	NA	intronic	ENSG00000197943	NA	NA	NA	NA	NA	16q23.3	NA	Name=NF-YB	NA	NA	rs41311268	0.01	0.01	0.007	0.00738818	0.0229	NA	0.0101	NA	0.0072	0.03	NA	0.0028	NA	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.844883	NA	NA	NA	NA	NA	NA	NA	4.9771
1154	20	1703187	1703187	A	T	intergenic	SIRPG,LOC100289473	dist=64762;dist=50824	NA	NA	upstream	ENSG00000234282	NA	NA	NA	NA	NA	20p13	NA	Name=IRF4_(M-17),BATF,NFKB	Name=15	NA	rs202513	0.49	0.49	0.48	0.491813	0.5229	0.3681	0.6182	0.5613	0.4039	0.51	0.4	0.56	0.53	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.087887	NA	NA	NA	NA	NA	0.522	NA	4.9771
1154	19	53945504	53945504	C	T	ncRNA_exonic	TPM3P9	NA	NA	NA	ncRNA_exonic	ENSG00000241015	NA	NA	NA	Score=712;Name=lod=1044	NA	19q13.42	NA	NA	NA	NA	rs12983857	0.53	0.53	0.481	0.549521	0.6899	0.3948	0.6326	0.3298	0.8027	0.7	0.4	0.63	0.34	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.803972	NA	NA	NA	NA	NA	0.348	NA	4.9767666
1154	22	42221846	42221846	C	T	UTR3	CCDC134	NM_024821:c.*19C>T	NA	NA	UTR3	ENSG00000100147	ENST00000255784:c.*19C>T,ENST00000402061:c.*19C>T	NA	NA	NA	NA	22q13.2	Score=812;Name=V$AP4_01	NA	NA	NA	rs41277466	0.13	0.13	0.094	0.134385	0.1054	0.0645	0.3761	0.0666	0.1564	0.1	0.06	0.38	0.08	0.1458	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.408459	NA	NA	0.105698	0.076748	NA	0.13	NA	4.9764354
1154	3	98153043	98153043	G	T	intergenic	OR5K3,OR5K1	dist=42568;dist=35378	NA	NA	ncRNA_exonic	ENSG00000244653	NA	NA	NA	Score=714;Name=lod=1059	NA	3q11.2	NA	NA	NA	NA	rs73132679	0.01	0.01	0.008	0.00858626	0.0239	0.002	0.0058	0.0023	0.0102	0.02	0.0017	0.01	0.002	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.124176	NA	NA	NA	NA	NA	0.007	NA	4.9761
1154	22	45958694	45958694	C	T	intronic	FBLN1	NA	NA	NA	intronic	ENSG00000077942	NA	NA	NA	NA	NA	22q13.31	NA	Name=CTCF_(SC-5916),CTCF	NA	NA	rs743930	0.01	0.01	0.011	0.00638978	0.0239	NA	0.0043	0.0015	0.0031	0.02	NA	0.01	0.002	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.026887	NA	NA	NA	NA	NA	NA	NA	4.9761
1154	1	67507914	67507914	C	G	intronic	SLC35D1	NA	NA	NA	intronic	ENSG00000116704	NA	NA	NA	Score=496;Name=lod=138	NA	1p31.3	NA	NA	NA	NA	rs7539628	0.07	0.07	0.071	0.0726837	0.002	NA	0.0303	0.2579	NA	0.0013	NA	0.04	0.26	0.0207	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.26636	1.26636	NA	0.001512	0.2197	NA	0.123	NA	4.975788
1154	11	71604727	71604727	C	T	ncRNA_intronic	LOC100133315	NA	NA	NA	ncRNA_exonic	ENSG00000228915	NA	NA	NA	Score=251;Name=lod=14	NA	11q13.4	NA	NA	NA	NA	rs526054	0.72	0.72	0.693	0.764577	0.6909	0.6022	0.6499	0.9773	0.8016	0.67	0.59	0.69	0.95	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.218758	NA	NA	NA	NA	NA	0.486	NA	4.9757666
1154	3	7620789	7620789	T	C	exonic	GRM7	NA	synonymous SNV	GRM7:NM_000844:exon8:c.T2196C:p.Y732Y,GRM7:NM_181874:exon8:c.T2196C:p.Y732Y	exonic	ENSG00000196277	NA	synonymous SNV	ENSG00000196277:ENST00000357716:exon8:c.T2196C:p.Y732Y,ENSG00000196277:ENST00000389335:exon8:c.T2196C:p.Y732Y,ENSG00000196277:ENST00000389336:exon8:c.T2196C:p.Y732Y,ENSG00000196277:ENST00000402647:exon8:c.T2196C:p.Y732Y,ENSG00000196277:ENST00000403881:exon8:c.T2196C:p.Y732Y,ENSG00000196277:ENST00000440923:exon8:c.T2196C:p.Y732Y,ENSG00000196277:ENST00000467425:exon8:c.T2196C:p.Y732Y,ENSG00000196277:ENST00000486284:exon8:c.T2196C:p.Y732Y	Score=541;Name=lod=211	NA	3p26.1	NA	NA	NA	NA	rs1485175	0.55	0.55	0.533	0.525559	0.5835	0.4355	0.5144	0.5703	0.5061	0.6	0.45	0.57	0.56	0.5478	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.830914	NA	NA	0.559884	0.573763	NA	0.667	NA	4.9754826
1154	17	41231516	41231516	C	T	intronic	BRCA1	NA	NA	NA	ncRNA_exonic	ENSG00000240828	NA	NA	NA	Score=732;Name=lod=1259	NA	17q21.31	NA	NA	NA	NA	rs8176193	0.33	0.33	0.295	0.353435	0.3579	0.371	0.3746	0.2194	0.4969	0.36	0.33	0.4	0.22	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.225151	NA	NA	NA	NA	NA	0.268	NA	4.9754333
1154	18	6986259	6986259	G	A	exonic	LAMA1	NA	synonymous SNV	LAMA1:NM_005559:exon37:c.C5256T:p.H1752H	exonic	ENSG00000101680	NA	synonymous SNV	ENSG00000101680:ENST00000389658:exon37:c.C5256T:p.H1752H	NA	NA	18p11.31	NA	NA	NA	NA	rs62081531	0.16	0.16	0.156	0.13778	0.2326	0.1915	0.147	0.0068	0.1554	0.24	0.17	0.18	0.01	0.1975	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.395002	NA	NA	0.261395	0.052882	ID=COSM148381;OCCURENCE=1(stomach),1(large_intestine)	0.203	NA	4.9751716
1154	3	149181715	149181715	C	T	intergenic	TM4SF1,TM4SF4	dist=86147;dist=10653	NA	NA	ncRNA_intronic	ENSG00000241929	NA	NA	NA	Score=617;Name=lod=428	NA	3q25.1	NA	NA	NA	NA	rs147291133	0.02	0.02	0.007	0.0127796	0.0249	NA	0.0533	0.0008	0.001	0.03	NA	0.03	NA	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.116335	NA	NA	NA	NA	NA	0.007	NA	4.9751
1154	12	122189932	122189932	G	A	intronic	TMEM120B	NA	NA	NA	intronic	ENSG00000188735	NA	NA	NA	NA	NA	12q24.31	NA	Name=SP1,HNF4G_(SC-6558)	NA	NA	rs12829306	0.01	0.01	0.01	0.0103834	0.0249	NA	0.036	NA	0.002	0.01	NA	0.04	NA	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.610276	NA	NA	NA	NA	NA	NA	NA	4.9751
1154	12	122189933	122189933	C	A	intronic	TMEM120B	NA	NA	NA	intronic	ENSG00000188735	NA	NA	NA	NA	NA	12q24.31	NA	Name=HNF4G_(SC-6558)	NA	NA	rs117774076	0.01	0.01	0.01	0.0103834	0.0249	NA	0.036	NA	0.002	0.01	NA	0.04	NA	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.542457	NA	NA	NA	NA	NA	NA	NA	4.9751
1154	18	23866528	23866528	G	A	intronic	TAF4B	NA	NA	NA	intronic	ENSG00000141384	NA	NA	NA	NA	NA	18q11.2	Score=859;Name=V$MEIS1AHOXA9_01	NA	NA	NA	rs55819001	0.01	0.01	0.009	0.00758786	0.0249	NA	0.013	NA	0.0041	0.02	NA	0.01	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.408335	NA	NA	NA	NA	NA	0.08	NA	4.9751
1155	20	46292149	46292149	T	G	intronic	SULF2	NA	NA	NA	intronic	ENSG00000196562	NA	NA	NA	NA	NA	20q13.12	NA	Name=Pol2	Name=6	NA	rs2235734	0.32	0.32	0.313	0.317692	0.336	0.249	0.3775	0.2912	0.363	0.33	0.26	0.4	0.31	0.3298	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.233918	NA	NA	0.359535	0.29823	NA	0.37	NA	4.974665
1155	6	84799185	84799185	C	T	exonic	MRAP2	NA	synonymous SNV	MRAP2:NM_138409:exon4:c.C603T:p.H201H	exonic	ENSG00000135324	NA	synonymous SNV	ENSG00000135324:ENST00000257776:exon4:c.C603T:p.H201H	NA	NA	6q14.2	NA	NA	NA	NA	rs2875382	0.32	0.32	0.313	0.349241	0.2306	0.1736	0.2666	0.711	0.2219	0.23	0.15	0.28	0.68	0.2521	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.473325	NA	NA	0.209535	0.644576	ID=COSM150129;OCCURENCE=1(stomach)	0.341	NA	4.9744316
1155	8	110509300	110509300	A	T	intronic	PKHD1L1	NA	NA	NA	intronic	ENSG00000205038	NA	NA	NA	Score=653;Name=lod=600	NA	8q23.2	NA	NA	NA	NA	rs57909958	0.01	0.01	0.013	0.0161741	0.008	NA	0.0173	0.0446	0.002	0.01	NA	0.02	0.03	0.0089	0.032	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.583301	NA	NA	0.008828	0.032161	NA	NA	NA	4.974272
1155	18	45156757	45156757	G	A	intergenic	IER3IP1,SMAD2	dist=454012;dist=202709	NA	NA	ncRNA_exonic	ENSG00000267156	NA	NA	NA	Score=313;Name=lod=25	NA	18q21.1	NA	NA	NA	NA	rs148834750	0.01	0.01	0.01	0.00758786	0.0258	NA	0.0159	NA	0.001	0.02	NA	0.02	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.351573	2.351573	NA	NA	NA	NA	0.007	NA	4.9742
1155	7	18631275	18631275	G	A	intronic	HDAC9	NA	NA	NA	intronic	ENSG00000048052	NA	NA	NA	NA	NA	7p21.1	Score=796;Name=V$HTF_01	NA	NA	NA	rs150067220	0.0037	0.0037	0.002	0.00199681	0.007	NA	0.0043	NA	NA	0.01	NA	0.01	NA	0.0069	0.012	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.691317	NA	NA	0.012039	0.00565	NA	NA	NA	4.974061
1155	3	51350112	51350112	T	A	intronic	DOCK3	NA	NA	NA	intronic	ENSG00000088538	NA	NA	NA	NA	NA	3p21.2	Score=752;Name=V$MYOGNF1_01	NA	NA	NA	rs113786671	0.01	0.01	0.009	0.00738818	0.0268	NA	0.0043	0.0023	0.0041	0.02	NA	0.01	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.829197	2.829197	NA	NA	NA	NA	NA	NA	4.9732
1155	4	19815458	19815458	G	A	intergenic	LCORL,SLIT2	dist=1791975;dist=439777	NA	NA	ncRNA_exonic	ENSG00000241612	NA	NA	NA	Score=752;Name=lod=1514	NA	4p15.31	NA	NA	NA	NA	rs75322959	0.08	0.08	0.062	0.0722843	0.0268	0.1905	0.1009	0.0461	0.0123	0.03	0.18	0.08	0.05	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.378965	1.378965	NA	NA	NA	NA	0.022	NA	4.9732
1155	7	86828471	86828471	C	G	intronic	TMEM243	NA	NA	NA	intronic	ENSG00000135185	NA	NA	NA	NA	NA	7q21.12	NA	NA	Name=3	NA	rs73208528	0.04	0.04	0.038	0.0347444	0.0268	0.0655	0.0115	0.0492	0.0082	0.03	0.06	0.01	0.05	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.085222	NA	NA	NA	NA	NA	0.123	NA	4.9732
1155	14	20875973	20875973	A	G	intronic	TEP1	NA	NA	NA	intronic	ENSG00000129566	NA	NA	NA	NA	NA	14q11.2	NA	Name=CEBPB	NA	NA	rs1713438	0.03	0.03	0.041	0.0329473	0.0268	NA	0.0159	0.0832	0.0174	0.03	NA	0.01	0.09	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.321506	1.321506	NA	NA	NA	NA	0.014	NA	4.9732
1155	16	721536	721536	C	T	intronic	RHOT2	NA	NA	NA	intronic	ENSG00000140983	NA	NA	NA	NA	NA	16p13.3	NA	NA	Name=3	NA	rs118039913	0.02	0.02	0.028	0.0211661	0.0268	0.0179	0.013	0.0189	0.0276	0.03	0.02	0.01	0.01	NA	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.561845	NA	NA	NA	NA	NA	0.029	NA	4.9732
1155	11	120976707	120976707	G	C	intronic	TECTA	NA	NA	NA	intronic	ENSG00000109927	NA	NA	NA	NA	NA	11q23.3	NA	NA	Name=9	NA	rs190884840	0.0027	0.0027	NA	0.00698882	0.0089	NA	0.0014	NA	0.0256	0.01	NA	0.0028	NA	0.0093	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.256682	1.256682	NA	0.008956	0.003177	NA	NA	NA	4.972844
1155	11	118947634	118947634	C	T	exonic	VPS11	NA	unknown	UNKNOWN	exonic	ENSG00000160695	NA	synonymous SNV	ENSG00000160695:ENST00000300793:exon9:c.C1263T:p.Y421Y	Score=576;Name=lod=291	NA	11q23.3	NA	NA	NA	NA	rs540261	0.46	0.46	0.447	0.431909	0.4811	0.7192	0.2954	0.202	0.4928	0.48	0.75	0.32	0.2	0.4448	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.422214	1.422214	NA	0.434644	0.238669	NA	0.442	NA	4.9727893
1155	8	42044954	42044954	G	A	exonic	PLAT	NA	synonymous SNV	PLAT:NM_033011:exon5:c.C363T:p.D121D,PLAT:NM_000930:exon6:c.C501T:p.D167D	exonic	ENSG00000104368	NA	synonymous SNV	ENSG00000104368:ENST00000352041:exon5:c.C363T:p.D121D,ENSG00000104368:ENST00000220809:exon6:c.C501T:p.D167D,ENSG00000104368:ENST00000270189:exon6:c.C501T:p.D167D,ENSG00000104368:ENST00000520523:exon6:c.C501T:p.D167D,ENSG00000104368:ENST00000429089:exon7:c.C501T:p.D167D	NA	NA	8p11.21	Score=829;Name=V$HNF4_01_B	NA	NA	NA	rs1058720	0.51	0.51	0.528	0.510783	0.5855	0.504	0.5735	0.348	0.6166	0.59	0.53	0.54	0.36	0.5507	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.066261	NA	NA	0.558023	0.404448	NA	0.478	NA	4.9724436
1155	5	155935720	155935720	T	C	intronic	SGCD	NA	NA	NA	intronic	ENSG00000170624	NA	NA	NA	NA	NA	5q33.3	NA	NA	NA	NA	rs11748588	0.01	0.01	0.006	0.00279553	0.0119	NA	0.0029	NA	NA	0.01	NA	0.01	NA	0.0067	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.132985	NA	NA	0.009144	0.000806	NA	0.007	CLINSIG=non-pathogenic|other;CLNDBN=Cardiomyopathy|not_specified;CLNREVSTAT=single|mult;CLNACC=RCV000030451.1|RCV000041404.3;CLNDSDB=MedGen:SNOMED_CT|.;CLNDSDBID=C0878544:85898001|.	4.972256
1155	7	55706218	55706218	T	C	intergenic	VOPP1,FKBP9L	dist=66018;dist=42549	NA	NA	ncRNA_exonic	ENSG00000234844	NA	NA	NA	Score=742;Name=lod=1380	NA	7p11.2	NA	NA	NA	NA	rs117364612	0.01	0.01	0.011	0.0105831	0.0278	NA	0.013	NA	0.0164	0.02	NA	0.02	NA	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.104885	NA	NA	NA	NA	NA	0.014	NA	4.9722
1155	7	138373845	138373845	A	G	intergenic	SVOPL,ATP6V0A4	dist=10055;dist=17194	NA	NA	ncRNA_exonic	ENSG00000243099	NA	NA	NA	Score=769;Name=lod=1777	NA	7q34	NA	NA	NA	NA	rs117989956	0.03	0.03	0.035	0.0447284	0.0278	0.0476	0.0461	0.0091	0.1063	0.03	0.05	0.05	0.0041	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.514249	NA	NA	NA	NA	NA	0.022	NA	4.9722
1155	10	79744817	79744817	T	C	intronic	POLR3A	NA	NA	NA	intronic	ENSG00000148606	NA	NA	NA	NA	NA	10q22.3	NA	NA	Name=7	NA	rs117990962	0.01	0.01	0.015	0.00978435	0.0278	NA	0.0231	0.0023	0.002	0.03	NA	0.02	0.01	NA	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.113828	NA	NA	NA	NA	NA	0.022	NA	4.9722
1155	11	40105881	40105881	C	T	intergenic	NONE,LRRC4C	dist=NONE;dist=29870	NA	NA	ncRNA_exonic	ENSG00000255347	NA	NA	NA	Score=321;Name=lod=27	NA	11p12	NA	NA	NA	NA	rs16934335	0.17	0.17	0.17	0.180711	0.0278	0.2986	0.0965	0.3116	0.0992	0.02	0.28	0.1	0.32	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.051279	NA	NA	NA	NA	NA	0.138	NA	4.9722
1155	20	17936173	17936173	T	A	intronic	SNX5	NA	NA	NA	intronic	ENSG00000089006	NA	NA	NA	NA	NA	20p11.23	NA	NA	Name=21	NA	rs150515099	0.02	0.02	0.01	0.0131789	0.0278	NA	0.0288	0.0015	0.0164	0.03	NA	0.04	0.01	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.798942	NA	NA	NA	NA	NA	0.029	NA	4.9722
1155	5	43609343	43609343	C	T	exonic	NNT	NA	synonymous SNV	NNT:NM_012343:exon2:c.C46T:p.L16L,NNT:NM_182977:exon2:c.C46T:p.L16L	exonic	ENSG00000112992	NA	synonymous SNV	ENSG00000112992:ENST00000264663:exon2:c.C46T:p.L16L,ENSG00000112992:ENST00000344920:exon2:c.C46T:p.L16L,ENSG00000112992:ENST00000505678:exon2:c.C46T:p.L16L,ENSG00000112992:ENST00000512422:exon2:c.C46T:p.L16L	Score=284;Name=lod=19	NA	5p12	NA	NA	NA	NA	rs10057103	0.54	0.54	0.586	0.558506	0.5885	0.2014	0.451	0.9433	0.4519	0.58	0.19	0.51	0.92	0.5354	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.179955	NA	NA	0.570581	0.878121	ID=COSM149827;OCCURENCE=1(stomach)	0.696	NA	4.9721856
1155	1	209969902	209969902	G	C	intronic	IRF6	NA	NA	NA	intronic	ENSG00000117595	NA	NA	NA	NA	NA	1q32.2	NA	Name=Pol2(b)	Name=7	NA	rs7552506	0.27	0.27	0.258	0.270966	0.3469	0.1548	0.2968	0.2413	0.3344	0.35	0.16	0.3	0.23	0.326	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.014927	NA	NA	0.355116	0.282569	NA	0.406	NA	4.971984
1155	19	38188233	38188233	T	G	UTR3	ZNF607	NM_001172677:c.*708A>C,NM_032689:c.*708A>C	NA	NA	UTR3	ENSG00000198182	ENST00000355202:c.*708A>C,ENST00000395835:c.*708A>C	NA	NA	Score=735;Name=lod=1289	NA	19q13.12	NA	NA	NA	NA	rs55743020	0.19	0.19	0.18	0.173922	0.3618	0.0288	0.2608	0.0598	0.2229	0.37	0.04	0.26	0.05	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.320062	NA	NA	NA	NA	NA	0.297	NA	4.9715334
1155	5	178555045	178555045	G	A	exonic	ADAMTS2	NA	synonymous SNV	ADAMTS2:NM_014244:exon17:c.C2532T:p.D844D	exonic	ENSG00000087116	NA	synonymous SNV	ENSG00000087116:ENST00000251582:exon17:c.C2532T:p.D844D	NA	NA	5q35.3	NA	NA	NA	NA	rs2303644	0.15	0.15	0.141	0.129992	0.2575	0.1002	0.2061	0.0098	0.138	0.25	0.09	0.2	0.01	0.2028	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.647094	NA	NA	0.235	0.050386	NA	0.138	NA	4.9713666
1155	7	6974872	6974872	G	C	intergenic	CCZ1B,LOC100131257	dist=108946;dist=140529	NA	NA	ncRNA_exonic	ENSG00000242731	NA	NA	NA	NA	NA	7p22.1	NA	Name=ERalpha_a	NA	NA	rs117557765	0.09	0.09	0.02	0.0209665	0.0288	NA	0.0259	0.0416	0.0031	0.08	0.08	0.14	0.08	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.85944	NA	NA	NA	NA	NA	NA	NA	4.9712
1155	7	30695397	30695397	C	T	intronic	CRHR2	NA	NA	NA	intronic	ENSG00000106113	NA	NA	NA	NA	NA	7p14.3	NA	NA	NA	NA	NA	NA	NA	NA	0.0163738	0.0288	NA	0.0245	0.0272	NA	NA	NA	NA	NA	NA	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.786048	NA	NA	NA	NA	NA	0.036	NA	4.9712
1155	8	2057131	2057131	T	G	intronic	MYOM2	NA	NA	NA	intronic	ENSG00000036448	NA	NA	NA	NA	NA	8p23.3	NA	Name=ZNF274	NA	NA	rs77802404	0.03	0.03	0.029	0.0327476	0.0288	NA	0.0447	0.0772	0.002	0.02	NA	0.05	0.06	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.112724	NA	NA	NA	NA	NA	0.022	NA	4.9712
1155	12	132152061	132152061	G	A	intergenic	LOC116437,SFSWAP	dist=454585;dist=43571	NA	NA	ncRNA_exonic	ENSG00000243499	NA	NA	NA	Score=790;Name=lod=2175	NA	12q24.33	NA	NA	NA	NA	rs140956418	0.02	0.02	0.013	0.0101837	0.0288	NA	0.0216	0.0023	0.0041	0.03	NA	0.02	0.0041	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.785707	NA	NA	NA	NA	NA	0.007	NA	4.9712
1155	22	30442992	30442992	A	G	intergenic	MTMR3,HORMAD2	dist=16135;dist=33461	NA	NA	ncRNA_exonic	ENSG00000227201	NA	NA	NA	Score=612;Name=lod=411	NA	22q12.2	NA	NA	NA	NA	rs11704643	0.02	0.02	0.017	0.0113818	0.0288	NA	0.0173	0.0038	0.0112	0.03	NA	0.01	0.01	NA	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.785616	NA	NA	NA	NA	NA	0.022	NA	4.9712
1155	9	95060490	95060490	T	C	intronic	NOL8	NA	NA	NA	intronic	ENSG00000198000	NA	NA	NA	NA	NA	9q22.31	NA	NA	Name=2	NA	rs188560839	0.01	0.01	NA	0.00499201	0.0179	NA	0.0043	0.0015	0.002	0.02	NA	0.01	0.002	0.011	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.368647	NA	NA	NA	NA	NA	0.007	NA	4.9711
1155	7	87179601	87179601	A	G	exonic	ABCB1	NA	synonymous SNV	ABCB1:NM_000927:exon13:c.T1236C:p.G412G	exonic	ENSG00000085563	NA	synonymous SNV	ENSG00000085563:ENST00000543898:exon10:c.T1044C:p.G348G,ENSG00000085563:ENST00000265724:exon13:c.T1236C:p.G412G	Score=622;Name=lod=450	NA	7q21.12	NA	NA	NA	NA	rs1128503	0.58	0.58	0.594	0.583866	0.5845	0.373	0.5965	0.8638	0.4131	0.57	0.34	0.57	0.86	0.5419	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.799699	NA	NA	0.569884	0.783931	NA	0.623	NA	4.9703826
1155	6	54489706	54489706	C	T	intergenic	TINAG,FAM83B	dist=234756;dist=221863	NA	NA	ncRNA_exonic	ENSG00000220773	NA	NA	NA	Score=793;Name=lod=2233	NA	6p12.1	NA	NA	NA	NA	rs9885773	0.02	0.02	0.021	0.0227636	0.0298	NA	0.0144	0.0552	0.001	0.03	NA	0.02	0.04	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.495375	NA	NA	NA	NA	NA	0.022	NA	4.9702
1155	6	154871088	154871088	G	A	intergenic	CNKSR3,SCAF8	dist=39335;dist=183424	NA	NA	ncRNA_exonic	ENSG00000220181	NA	NA	NA	Score=517;Name=lod=168	NA	6q25.2	NA	NA	NA	NA	rs76066708	0.04	0.04	0.055	0.0407348	0.0298	0.0496	0.0418	0.053	0.0256	0.03	0.05	0.04	0.05	NA	0.076	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.067378	NA	NA	NA	NA	NA	0.058	NA	4.9702
1155	15	94577262	94577262	G	C	intergenic	RGMA,MCTP2	dist=944819;dist=264168	NA	NA	ncRNA_exonic	ENSG00000258895	NA	NA	NA	Score=677;Name=lod=751	NA	15q26.2	NA	NA	NA	NA	rs141679816	0.01	0.01	0.007	0.00878594	0.0298	NA	0.0173	0.0015	NA	0.02	NA	0.02	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.567576	NA	NA	NA	NA	NA	0.007	NA	4.9702
1155	17	18922970	18922970	G	C	intronic	SLC5A10	NA	NA	NA	intronic	ENSG00000154025	NA	NA	NA	NA	NA	17p11.2	NA	Name=EBF1_(C-8),Egr-1,ZBTB7A_(SC-34508)	NA	NA	rs12603640	0.11	0.11	0.102	0.146366	0.0298	0.1339	0.0634	0.2988	0.1319	0.03	0.14	0.06	0.25	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.611915	NA	NA	NA	NA	NA	0.152	NA	4.9702
1155	10	128830409	128830409	A	G	exonic	DOCK1	NA	synonymous SNV	DOCK1:NM_001380:exon18:c.A1674G:p.A558A	exonic	ENSG00000150760	NA	synonymous SNV	ENSG00000150760:ENST00000280333:exon18:c.A1674G:p.A558A	NA	NA	10q26.2	NA	NA	NA	NA	rs2229597	0.15	0.15	0.128	0.125998	0.2137	0.0873	0.2003	0.0461	0.1309	0.21	0.09	0.22	0.05	0.2695	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.036425	NA	NA	0.213438	0.069357	NA	0.167	NA	4.9700286
1155	9	125330739	125330739	G	A	exonic	OR1L8	NA	synonymous SNV	OR1L8:NM_001004454:exon1:c.C18T:p.H6H	exonic	ENSG00000171496	NA	synonymous SNV	ENSG00000171496:ENST00000304865:exon1:c.C18T:p.H6H	Score=417;Name=lod=66	NA	9q33.2	NA	NA	NA	NA	rs1999182	0.65	0.65	0.631	0.632388	0.5467	0.9792	0.6124	0.4811	0.5818	0.53	0.99	0.62	0.47	0.5903	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.548936	NA	NA	0.559651	0.495234	NA	0.471	NA	4.9700156
1155	16	57015545	57015545	C	T	intronic	CETP	NA	NA	NA	intronic	ENSG00000087237	NA	NA	NA	NA	NA	16q13	NA	Name=EBF1_(C-8),EBF	Name=13	NA	rs1800774	0.27	0.27	0.259	0.266973	0.3509	0.127	0.3242	0.2526	0.3037	0.35	0.12	0.32	0.28	0.3232	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.420346	NA	NA	0.356395	0.267971	NA	0.37	NA	4.969505
1155	1	224486305	224486305	G	C	intronic	NVL	NA	NA	NA	intronic	ENSG00000143748	NA	NA	NA	Score=529;Name=lod=188	NA	1q42.11	NA	NA	NA	NA	rs3767722	0.05	0.05	0.046	0.0503195	0.0308	0.1101	0.0159	0.0166	0.0787	0.03	0.1	0.02	0.03	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.038795	NA	NA	NA	NA	NA	0.014	NA	4.9692
1155	12	42825887	42825887	C	G	intronic	PPHLN1	NA	NA	NA	ncRNA_exonic	ENSG00000257376	NA	NA	NA	Score=748;Name=lod=1468	NA	12q12	NA	NA	NA	NA	rs1669890	0.3	0.3	0.242	0.250599	0.3648	0.255	0.3862	0.0779	0.2658	0.37	0.29	0.43	0.09	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.126321	NA	NA	NA	NA	ID=COSN164219;OCCURENCE=1(breast)	0.246	NA	4.9685333
1155	3	49836707	49836707	G	A	exonic	CDHR4	NA	synonymous SNV	CDHR4:NM_001007540:exon2:c.C213T:p.A71A	exonic	ENSG00000187492	NA	synonymous SNV	ENSG00000187492:ENST00000343366:exon2:c.C213T:p.A71A,ENSG00000187492:ENST00000412678:exon2:c.C213T:p.A71A,ENSG00000187492:ENST00000487256:exon2:c.C213T:p.A71A	NA	NA	3p21.31	NA	NA	NA	NA	rs7629936	0.21	0.21	0.226	0.233227	0.2386	0.1488	0.1844	0.2632	0.3088	0.23	0.16	0.17	0.23	0.2291	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.739707	NA	NA	0.230613	0.23497	ID=COSM1424032;OCCURENCE=1(large_intestine)	0.159	NA	4.9683536
1155	11	12315848	12315848	C	T	exonic	MICALCL	NA	synonymous SNV	MICALCL:NM_032867:exon3:c.C870T:p.G290G	exonic	ENSG00000133808	NA	synonymous SNV	ENSG00000133808:ENST00000256186:exon3:c.C870T:p.G290G	NA	NA	11p15.3	NA	NA	NA	NA	rs1493952	0.44	0.44	0.452	NA	NA	NA	NA	NA	NA	0.32	0.53	0.4	0.54	0.3809	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.389359	NA	NA	0.317464	0.517986	NA	0.428	NA	4.9683026
1155	12	122497001	122497001	T	C	exonic	BCL7A	NA	synonymous SNV	BCL7A:NM_001024808:exon6:c.T565C:p.L189L,BCL7A:NM_020993:exon6:c.T628C:p.L210L	exonic	ENSG00000110987	NA	synonymous SNV	ENSG00000110987:ENST00000261822:exon6:c.T565C:p.L189L,ENSG00000110987:ENST00000538010:exon6:c.T628C:p.L210L	Score=412;Name=lod=63	NA	12q24.31	NA	NA	NA	NA	rs28629903	0.51	0.51	0.474	0.505391	0.5795	0.4921	0.6196	0.3487	0.5736	0.58	0.53	0.59	0.35	0.5588	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.188278	NA	NA	0.560116	0.378348	NA	0.435	NA	4.9682506
1155	4	40338079	40338079	G	A	intronic	CHRNA9	NA	NA	NA	intronic	ENSG00000174343	NA	NA	NA	NA	NA	4p14	NA	NA	Name=6	NA	rs55893318	0.01	0.01	0.003	0.0129792	0.0318	NA	0.013	NA	0.0245	0.03	NA	0.02	NA	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.632576	NA	NA	NA	NA	NA	NA	NA	4.9682
1155	22	44341986	44341986	T	C	intronic	PNPLA3	NA	NA	NA	intronic	ENSG00000100344	NA	NA	NA	NA	NA	22q13.31	NA	Name=CTCF_(C-20),c-Myc,CTCF_(SC-5916),CTCF,Rad21,SMC3_(ab9263),E2F6_(H-50),CTCFL_(SC-98982),Znf143_(16618-1-AP)	Name=138	NA	rs2294917	0.35	0.35	0.331	0.375399	0.3509	0.4325	0.2666	0.3177	0.4969	0.37	0.4	0.28	0.32	0.3487	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.52946	NA	NA	0.332674	0.319255	NA	0.341	NA	4.967726
1155	10	5541183	5541183	C	T	exonic	CALML5	NA	synonymous SNV	CALML5:NM_017422:exon1:c.G219A:p.A73A	exonic	ENSG00000178372	NA	synonymous SNV	ENSG00000178372:ENST00000380332:exon1:c.G219A:p.A73A	NA	NA	10p15.1	NA	NA	NA	NA	rs10904517	0.35	0.35	0.034	0.355431	0.3231	0.3065	0.2334	0.5182	0.3057	0.32	0.29	0.25	0.52	0.3348	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.505298	NA	NA	0.041163	0.092374	ID=COSM1561299;OCCURENCE=1(large_intestine)	NA	NA	4.9676036
1155	7	64292695	64292695	G	A	UTR3	ZNF138	NM_006524:c.*115G>A,NM_001271649:c.*115G>A,NM_001160183:c.*831G>A,NM_001271640:c.*831G>A,NM_001271638:c.*115G>A,NM_001271637:c.*890G>A,NM_001271639:c.*115G>A	NA	NA	UTR3	ENSG00000197008	ENST00000359735:c.*115G>A,ENST00000437743:c.*115G>A,ENST00000440598:c.*890G>A,ENST00000397136:c.*115G>A	NA	NA	NA	NA	7q11.21	NA	NA	Name=5	NA	rs6460195	0.26	0.26	0.225	0.239217	0.3658	0.1617	0.3314	0.1165	0.2894	0.35	0.18	0.35	0.12	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.765395	NA	NA	NA	NA	NA	0.362	NA	4.9675334
1155	5	178999658	178999658	A	G	intronic	RUFY1	NA	NA	NA	ncRNA_exonic	ENSG00000249140	NA	NA	NA	Score=476;Name=lod=115	NA	5q35.3	NA	NA	NA	NA	rs7447429	0.49	0.49	0.472	0.486821	0.3658	0.7312	0.513	0.3888	0.4734	0.35	0.74	0.5	0.39	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.138476	NA	NA	NA	NA	NA	0.399	NA	4.9675333
1155	6	41121974	41121974	T	C	intronic	TREML1	NA	NA	NA	intronic	ENSG00000161911	NA	NA	NA	NA	NA	6p21.1	NA	NA	Name=9	NA	rs41273762	0.0037	0.0037	0.008	0.0191693	0.0119	0.005	0.0029	NA	0.0787	0.01	0.0035	NA	NA	0.0137	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.02805	2.02805	NA	0.007093	0.001135	NA	NA	NA	4.967307
1155	19	40171396	40171396	G	C	ncRNA_intronic	LGALS17A	NA	NA	NA	ncRNA_intronic	ENSG00000226025	NA	NA	NA	NA	NA	19q13.2	NA	Name=NFKB,Pol2-4H8	NA	NA	rs7253676	0.77	0.77	0.777	0.724241	0.6998	0.8185	0.7147	0.7716	0.5951	0.7	0.82	0.74	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.16917	NA	NA	NA	NA	NA	0.804	NA	4.9668666
1155	1	228494696	228494696	G	A	exonic	OBSCN	NA	synonymous SNV	OBSCN:NM_001098623:exon45:c.G12021A:p.A4007A,OBSCN:NM_052843:exon45:c.G12021A:p.A4007A,OBSCN:NM_001271223:exon56:c.G14892A:p.A4964A	exonic	ENSG00000154358	NA	synonymous SNV	ENSG00000154358:ENST00000284548:exon45:c.G12021A:p.A4007A,ENSG00000154358:ENST00000366709:exon45:c.G3378A:p.A1126A,ENSG00000154358:ENST00000422127:exon45:c.G12021A:p.A4007A,ENSG00000154358:ENST00000366707:exon51:c.G4923A:p.A1641A,ENSG00000154358:ENST00000570156:exon56:c.G14892A:p.A4964A	NA	NA	1q42.13	NA	NA	NA	NA	rs4653939	0.33	0.33	0.3	0.308506	0.1869	0.497	0.2925	0.3714	0.1656	0.2	0.5	0.3	0.37	0.3186	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.240287	NA	NA	0.194496	0.372311	NA	0.29	NA	4.9666706
1155	18	319935	319935	T	C	UTR3	COLEC12	NM_130386:c.*110A>G	NA	NA	UTR3	ENSG00000158270	ENST00000400256:c.*110A>G	NA	NA	Score=403;Name=lod=58	NA	18p11.32	NA	NA	NA	NA	rs12190	0.27	0.27	0.23	0.265575	0.3668	0.0883	0.2622	0.3427	0.2423	0.37	0.07	0.29	0.31	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.147137	NA	NA	NA	NA	NA	0.304	NA	4.9665334
1155	1	233424788	233424788	T	G	intronic	PCNXL2	NA	NA	NA	ncRNA_exonic	ENSG00000231940	NA	NA	NA	Score=768;Name=lod=1761	NA	1q42.2	NA	NA	NA	NA	rs1294329	0.3	0.3	0.296	0.364617	0.3668	0.1696	0.245	0.4955	0.4714	0.34	0.14	0.24	0.46	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.052295	NA	NA	NA	NA	NA	0.283	NA	4.9665333
1155	6	150116798	150116798	C	T	intronic	PCMT1	NA	NA	NA	ncRNA_exonic	ENSG00000219433	NA	NA	NA	Score=707;Name=lod=996	NA	6q25.1	NA	NA	NA	NA	rs3805753	0.64	0.64	0.627	0.666933	0.3668	0.8343	0.6715	0.9009	0.4836	0.35	0.8	0.63	0.89	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.370959	NA	NA	NA	NA	NA	0.71	NA	4.9665333
1155	9	19424010	19424010	G	A	intronic	ACER2	NA	NA	NA	intronic	ENSG00000177076	NA	NA	NA	NA	NA	9p22.1	NA	NA	Name=3	NA	rs78074656	0.02	0.02	0.029	0.0333466	0.0109	NA	0.013	0.0953	0.0215	0.01	NA	0.01	0.09	0.0144	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.795541	NA	NA	0.008256	0.073536	NA	0.029	NA	4.966444
1155	3	196746629	196746629	T	C	exonic	MFI2	NA	synonymous SNV	MFI2:NM_033316:exon7:c.A756G:p.E252E	exonic	ENSG00000163975	NA	synonymous SNV	ENSG00000163975:ENST00000296351:exon7:c.A756G:p.E252E	NA	NA	3q29	NA	NA	NA	NA	rs1056664	0.28	0.28	0.259	0.266374	0.2266	0.2847	0.3444	0.2844	0.2086	0.21	0.29	0.36	0.33	0.2515	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.425133	NA	NA	0.222326	0.27281	NA	0.225	NA	4.9662406
1155	20	61389569	61389569	C	G	intronic	NTSR1	NA	NA	NA	intronic	ENSG00000101188	NA	NA	NA	NA	NA	20q13.33	NA	Name=E2F6_(H-50)	NA	NA	rs62198382	0.41	0.41	0.02	0.0457268	0.0338	0.0278	0.0346	0.0348	0.0992	0.4	0.51	0.46	0.26	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.214401	NA	NA	NA	NA	NA	NA	NA	4.9662
1155	6	2675271	2675271	C	T	intronic	MYLK4	NA	NA	NA	intronic	ENSG00000145949	NA	NA	NA	NA	NA	6p25.2	NA	Name=PU.1	Name=2	NA	rs9328114	0.23	0.23	0.237	0.217252	0.3579	0.0734	0.183	0.2186	0.2434	0.36	0.07	0.21	0.22	0.3014	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.818344	NA	NA	0.374651	0.247844	NA	0.261	NA	4.966049
1155	19	45004305	45004305	G	C	UTR5	ZNF180	NM_013256:c.-13C>G	NA	NA	UTR5	ENSG00000167384	ENST00000221327:c.-13C>G,ENST00000391956:c.-13C>G,ENST00000590088:c.-13C>G,ENST00000587047:c.-13C>G	NA	NA	NA	NA	19q13.31	NA	Name=Pol2,E2F6,E2F6_(H-50),TAF1,E2F4,EBF1_(C-8),ELF1_(SC-631),Sin3Ak-20,HA-E2F1,GATA-2,Pol2-4H8,E2F1,Nrf1,c-Myc,ZBTB7A_(SC-34508)	Name=148	NA	rs12977470	0.34	0.34	0.322	0.347644	0.4453	0.3929	0.3934	0.0567	0.5613	0.43	0.37	0.45	0.07	0.4268	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.936235	NA	NA	0.495233	0.128915	NA	0.254	NA	4.9660004
1155	11	102826539	102826539	C	T	upstream	MMP13	NA	NA	NA	upstream	ENSG00000137745	NA	NA	NA	NA	NA	11q22.2	NA	Name=MafK_(SC-477),MafF_(M8194),JunD,MafK_(ab50322)	Name=28	NA	rs2252070	0.64	0.64	0.619	0.635982	0.7008	0.497	0.6484	0.7186	0.592	0.7	0.5	0.64	0.7	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.357462	NA	NA	NA	NA	NA	0.768	NA	4.9658666
1155	16	21216992	21216992	A	G	intronic	ZP2	NA	NA	NA	ncRNA_intronic	ENSG00000262983	NA	NA	NA	NA	NA	16p12.2	NA	Name=HNF4G_(SC-6558),HNF4A_(H-171)	NA	NA	rs2242551	0.13	0.13	0.132	0.112819	0.1988	0.1706	0.0836	0.0076	0.1278	0.19	0.16	0.1	0.01	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.408284	NA	NA	0.168762	0.028902	NA	0.101	NA	4.9657713
1155	11	7022038	7022038	A	G	exonic	ZNF214	NA	synonymous SNV	ZNF214:NM_013249:exon3:c.T876C:p.F292F	exonic	ENSG00000149050	NA	synonymous SNV	ENSG00000149050:ENST00000278314:exon3:c.T876C:p.F292F,ENSG00000149050:ENST00000536068:exon4:c.T876C:p.F292F	NA	NA	11p15.4	NA	NA	NA	NA	rs12575236	0.19	0.19	0.146	0.20028	0.2266	0.2431	0.3055	0.0121	0.3088	0.23	0.25	0.25	0.02	0.237	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.402883	NA	NA	0.237308	0.047955	NA	0.159	NA	4.9657586
1155	11	119054488	119054488	C	T	UTR3	NLRX1	NM_024618:c.*340C>T	NA	NA	UTR3	ENSG00000160703	ENST00000409991:c.*340C>T,ENST00000292199:c.*340C>T,ENST00000409109:c.*340C>T	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs10790286	0.53	0.53	0.534	0.511781	0.4642	0.6518	0.366	0.5703	0.4407	0.45	0.66	0.4	0.59	0.4648	0.66	0	D	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.949	T	0.000	T	.	0.943	8.846	-0.495	-0.471	-0.453	5.297	0.943467	NA	NA	0.438638	0.525407	NA	0.63	NA	4.9656954
1155	19	51984725	51984725	T	A	exonic	CEACAM18	NA	nonsynonymous SNV	CEACAM18:NM_001080405:exon4:c.T662A:p.L221H	exonic	ENSG00000213822	NA	nonsynonymous SNV	ENSG00000213822:ENST00000396477:exon3:c.T479A:p.L160H,ENSG00000213822:ENST00000451626:exon4:c.T662A:p.L221H	NA	NA	19q13.41	NA	NA	NA	NA	rs8106673	0.86	0.86	0.844	0.887181	0.7684	0.9246	0.853	0.9637	0.8916	0.76	0.92	0.84	0.94	0.8253	0.94	0.57	T	0.001	B	0.002	B	.	.	1.000	P	0.87	L	3.49	T	-1.032	T	0.000	T	0.059	-1.02	0.232	1.71	0.043	0.025	5.394	-1.019999	NA	0.53	0.774067	0.932191	NA	0.877	NA	4.9655664
1155	1	212482852	212482852	C	T	intronic	PPP2R5A	NA	NA	NA	ncRNA_exonic	ENSG00000225338	NA	NA	NA	Score=753;Name=lod=1537	NA	1q32.3	NA	NA	NA	NA	rs351380	0.3	0.3	0.278	0.282149	0.3678	0.2837	0.3516	0.1543	0.316	0.37	0.3	0.35	0.16	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.366555	1.366555	NA	NA	NA	NA	0.239	NA	4.9655333
1155	7	89975920	89975920	T	A	upstream	GTPBP10	NA	NA	NA	intronic	ENSG00000105793	NA	NA	NA	NA	NA	7q21.13	NA	Name=CTCF_(SC-5916),RFX5_(N-494),YY1,Egr-1,HA-E2F1,Sin3Ak-20,GATA-2,Pol2-4H8,JunD,FOSL2,GTF2B,Nrf1,TBP,IRF1,CCNT2,c-Myc,ZEB1_(SC-25388),NFKB,PAX5-C20,PAX5-N19,SETDB1,SRF,CTCF_(C-20),SIX5,Pol2,PU.1,Mxi1_(bHLH),ATF3,SP1,NRSF,TCF4,SMC3_(ab9263),CtBP2,YY1_(C-20),BRCA1_(C-1863),GATA3_(SC-268),IRF4_(M-17),eGFP-JunD,E2F6,USF1_(SC-8983),GATA-1,TAF1,E2F6_(H-50),CTCFL_(SC-98982),Znf143_(16618-1-AP),E2F4,GABP,HMGN3,CTCF,CEBPB,GTF2F1_(RAP-74),Max,Rad21,ELF1_(SC-631)	Name=147	NA	rs42646	0.94	0.94	0.924	0.948283	0.8678	0.999	0.9035	0.9894	0.955	0.88	1	0.89	0.99	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.194452	NA	NA	NA	NA	NA	0.92	NA	4.9655333
1155	19	57647015	57647015	A	G	exonic	ZIM3	NA	synonymous SNV	ZIM3:NM_052882:exon5:c.T690C:p.N230N	exonic	ENSG00000141946	NA	synonymous SNV	ENSG00000141946:ENST00000269834:exon5:c.T690C:p.N230N	Score=361;Name=lod=39	NA	19q13.43	NA	NA	NA	NA	rs7251328	0.64	0.64	0.625	0.649361	0.5507	0.7649	0.6225	0.652	0.6472	0.54	0.78	0.63	0.62	0.5951	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.740756	NA	NA	0.555349	0.650704	NA	0.529	NA	4.9655176
1155	1	29189597	29189597	C	T	exonic	OPRD1	NA	synonymous SNV	OPRD1:NM_000911:exon3:c.C921T:p.G307G	exonic	ENSG00000116329	NA	synonymous SNV	ENSG00000116329:ENST00000234961:exon3:c.C921T:p.G307G	Score=635;Name=lod=509	NA	1p35.3	NA	NA	NA	NA	rs2234918	0.59	0.59	0.56	0.58127	0.5726	0.754	0.7032	0.3056	0.6984	0.57	0.8	0.69	0.31	0.5918	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.208784	NA	NA	0.536977	0.342189	ID=COSM1560682;OCCURENCE=1(large_intestine)	0.457	NA	4.9652896
1155	1	22649487	22649487	G	A	intergenic	WNT4,ZBTB40	dist=179968;dist=128857	NA	NA	ncRNA_exonic	ENSG00000234397	NA	NA	NA	Score=668;Name=lod=689	NA	1p36.12	NA	NA	NA	NA	rs11580218	NA	NA	NA	0.0131789	0.0348	NA	0.0187	0.0076	0.0082	NA	NA	NA	NA	NA	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.016053	NA	NA	NA	NA	NA	0.022	NA	4.9652
1155	1	224468986	224468986	C	T	intronic	NVL	NA	NA	NA	intronic	ENSG00000143748	NA	NA	NA	Score=278;Name=lod=18	NA	1q42.11	NA	NA	NA	NA	rs112070546	NA	NA	NA	0.101637	0.0348	0.1141	0.0418	0.1377	0.1513	NA	NA	NA	NA	NA	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.137901	NA	NA	NA	NA	NA	0.022	NA	4.9652
1155	10	116067461	116067461	C	T	intronic	AFAP1L2	NA	NA	NA	intronic	ENSG00000169129	NA	NA	NA	NA	NA	10q25.3	NA	NA	Name=6	NA	rs2286397	0.15	0.15	0.151	0.136781	0.0348	0.2113	0.0432	0.2897	0.0245	0.04	0.23	0.05	0.3	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.12932	NA	NA	NA	NA	NA	0.123	NA	4.9652
1156	2	242610738	242610738	T	C	exonic	ATG4B	NA	synonymous SNV	ATG4B:NM_013325:exon12:c.T1026C:p.L342L,ATG4B:NM_178326:exon12:c.T1026C:p.L342L	exonic	ENSG00000168397	NA	synonymous SNV	ENSG00000168397:ENST00000428861:exon5:c.T537C:p.L179L,ENSG00000168397:ENST00000402096:exon12:c.T804C:p.L268L,ENSG00000168397:ENST00000404914:exon12:c.T1026C:p.L342L,ENSG00000168397:ENST00000405546:exon12:c.T1026C:p.L342L,ENSG00000168397:ENST00000396411:exon13:c.T804C:p.L268L,ENSG00000168397:ENST00000474739:exon13:c.T984C:p.L328L	NA	NA	2q37.3	NA	NA	NA	NA	rs11538896	0.22	0.22	0.187	0.205072	0.2336	0.2966	0.2089	0.0787	0.2495	0.25	0.31	0.21	0.1	0.2465	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.12653	NA	NA	0.221907	0.096676	NA	0.217	NA	4.9646596
1156	20	17497769	17497769	G	A	intronic	BFSP1	NA	NA	NA	ncRNA_exonic	ENSG00000232333	NA	NA	NA	Score=763;Name=lod=1676	NA	20p12.1	NA	NA	NA	NA	rs2023224	0.41	0.41	0.358	0.422524	0.3688	0.3988	0.4063	0.4803	0.4356	0.37	0.4	0.4	0.48	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.288565	NA	NA	NA	NA	NA	0.37	NA	4.9645333
1156	17	3844787	3844787	C	G	exonic	ATP2A3	NA	synonymous SNV	ATP2A3:NM_005173:exon13:c.G1707C:p.A569A,ATP2A3:NM_174953:exon13:c.G1707C:p.A569A,ATP2A3:NM_174954:exon13:c.G1707C:p.A569A,ATP2A3:NM_174955:exon13:c.G1707C:p.A569A,ATP2A3:NM_174956:exon13:c.G1707C:p.A569A,ATP2A3:NM_174957:exon13:c.G1707C:p.A569A,ATP2A3:NM_174958:exon13:c.G1707C:p.A569A	exonic	ENSG00000074370	NA	synonymous SNV	ENSG00000074370:ENST00000309890:exon13:c.G1707C:p.A569A,ENSG00000074370:ENST00000352011:exon13:c.G1707C:p.A569A,ENSG00000074370:ENST00000359983:exon13:c.G1707C:p.A569A,ENSG00000074370:ENST00000397035:exon13:c.G1707C:p.A569A,ENSG00000074370:ENST00000397041:exon13:c.G1707C:p.A569A,ENSG00000074370:ENST00000397043:exon13:c.G1707C:p.A569A	NA	NA	17p13.2	NA	NA	NA	NA	rs1800912	0.17	0.17	0.134	0.147963	0.2515	0.004	0.2637	0.1589	0.093	0.27	0.0035	0.26	0.13	0.2041	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.612015	NA	NA	0.246744	0.176123	NA	0.21	NA	4.9643226
1156	21	42845374	42845374	G	A	exonic	TMPRSS2	NA	synonymous SNV	TMPRSS2:NM_001135099:exon9:c.C888T:p.G296G,TMPRSS2:NM_005656:exon9:c.C777T:p.G259G	exonic	ENSG00000184012	NA	synonymous SNV	ENSG00000184012:ENST00000424093:exon8:c.C657T:p.G219G,ENSG00000184012:ENST00000332149:exon9:c.C777T:p.G259G,ENSG00000184012:ENST00000398585:exon9:c.C888T:p.G296G,ENSG00000184012:ENST00000458356:exon9:c.C777T:p.G259G,ENSG00000184012:ENST00000454499:exon10:c.C777T:p.G259G	NA	NA	21q22.3	NA	NA	NA	NA	rs2298659	0.24	0.24	0.24	0.209465	0.2296	0.249	0.2176	0.1747	0.1892	0.25	0.3	0.2	0.18	0.2554	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.360879	NA	NA	0.217457	0.185695	ID=COSM444509,COSM444508,COSM1483963;OCCURENCE=1(breast)	0.13	NA	4.9642096
1156	3	14220517	14220517	C	G	intronic	LSM3	NA	NA	NA	intronic	ENSG00000170860	NA	NA	NA	NA	NA	3p25.1	NA	Name=CHD2_(N-1250),TBP,Oct-2,NFKB,Pol2-4H8,YY1,Pol2,POU2F2,Pol2(b)	NA	NA	rs3731054	0.13	0.13	0.105	0.128395	0.0358	0.4107	0.1124	0.0015	0.1155	0.04	0.36	0.09	0.0041	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.786554	NA	NA	NA	NA	NA	0.036	NA	4.9642
1156	20	62701092	62701092	A	C	intronic	TCEA2	NA	NA	NA	intronic	ENSG00000171703	NA	NA	NA	NA	NA	20q13.33	NA	Name=CTCF,Max,USF2	Name=54	NA	rs4809393	0.32	0.32	0.324	0.375599	0.33	0.2272	0.3156	0.4463	0.5225	0.33	0.25	0.32	0.41	0.3626	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.310256	NA	NA	0.343256	0.423967	NA	0.254	NA	4.964144
1156	17	53158492	53158492	G	A	exonic	STXBP4	NA	synonymous SNV	STXBP4:NM_178509:exon16:c.G1437A:p.A479A	exonic	ENSG00000166263	NA	synonymous SNV	ENSG00000166263:ENST00000434978:exon15:c.G1371A:p.A457A,ENSG00000166263:ENST00000376352:exon16:c.G1437A:p.A479A	NA	NA	17q22	NA	NA	NA	NA	rs8069999	0.19	0.19	0.194	0.189097	0.2455	0.2431	0.1484	0.0613	0.2771	0.25	0.22	0.17	0.08	0.2275	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.3542	NA	NA	0.229767	0.076487	NA	0.239	NA	4.9638996
1156	14	59792842	59792842	T	G	intronic	DAAM1	NA	NA	NA	intronic	ENSG00000100592	NA	NA	NA	NA	NA	14q23.1	NA	NA	Name=54	NA	rs150651346	0.01	0.01	0.006	0.00519169	0.0159	NA	0.0115	NA	0.002	0.02	NA	0.01	NA	0.0086	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.551622	NA	NA	0.011628	0.001589	NA	0.007	NA	4.963872
1156	10	124800853	124800853	C	T	exonic	ACADSB	NA	synonymous SNV	ACADSB:NM_001609:exon5:c.C639T:p.H213H	exonic	ENSG00000196177	NA	synonymous SNV	ENSG00000196177:ENST00000368869:exon4:c.C333T:p.H111H,ENSG00000196177:ENST00000358776:exon5:c.C639T:p.H213H	NA	NA	10q26.13	NA	NA	NA	NA	rs1140591	0.2	0.2	0.2	0.227835	0.2296	0.1419	0.2176	0.2163	0.3374	0.23	0.14	0.2	0.23	0.2388	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.053219	NA	NA	0.234535	0.215615	NA	0.138	NA	4.9637316
1156	15	42820589	42820589	G	A	exonic	SNAP23	NA	synonymous SNV	SNAP23:NM_003825:exon6:c.G396A:p.T132T	exonic	ENSG00000092531	NA	synonymous SNV	ENSG00000092531:ENST00000566327:exon5:c.G267A:p.T89T,ENSG00000092531:ENST00000249647:exon6:c.G396A:p.T132T	NA	NA	15q15.2	NA	NA	NA	NA	rs1060291	0.25	0.25	0.295	0.282748	0.2227	0.0079	0.2061	0.6611	0.1708	0.21	0.0035	0.22	0.63	0.2377	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.3197	NA	NA	0.242615	0.582615	NA	0.297	NA	4.9636516
1156	13	43788036	43788036	T	G	UTR3	ENOX1	NM_001242863:c.*90A>C,NM_017993:c.*90A>C,NM_001127615:c.*90A>C	NA	NA	UTR3	ENSG00000120658	ENST00000261488:c.*90A>C,ENST00000412891:c.*90A>C	NA	NA	NA	NA	13q14.11	NA	NA	Name=3	NA	rs703206	0.49	0.49	0.49	0.509984	0.3698	0.4554	0.5331	0.7375	0.3865	0.37	0.45	0.49	0.73	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.674067	NA	NA	NA	NA	NA	0.609	NA	4.9635334
1156	19	58419841	58419841	G	T	UTR3	ZNF417	NM_152475:c.*77C>A	NA	NA	UTR3	ENSG00000173480	ENST00000312026:c.*77C>A,ENST00000536263:c.*77C>A	NA	NA	Score=378;Name=lod=46	NA	19q13.43	NA	NA	NA	NA	rs10414704	0.31	0.31	0.303	0.311502	0.3698	0.2847	0.2867	0.2958	0.318	0.37	0.25	0.31	0.29	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.09275	NA	NA	NA	NA	NA	0.341	NA	4.9635334
1156	13	48337770	48337770	T	C	intergenic	HTR2A,SUCLA2	dist=866559;dist=179021	NA	NA	ncRNA_exonic	ENSG00000234145	NA	NA	NA	Score=693;Name=lod=872	NA	13q14.2	NA	NA	NA	NA	rs141670660	0.02	0.02	0.015	0.0111821	0.0368	0.001	0.0187	0.0008	0.0041	0.04	0.0017	0.02	NA	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.468832	NA	NA	NA	NA	NA	0.022	NA	4.9632
1156	19	22793164	22793164	C	T	intergenic	LOC440518,ZNF492	dist=6812;dist=23962	NA	NA	ncRNA_exonic	ENSG00000269316	NA	NA	NA	Score=747;Name=lod=1450	NA	19p12	NA	NA	NA	NA	rs8111709	0.09	0.09	0.09	0.0934505	0.0368	0.0565	0.1354	0.1861	0.0348	0.04	0.07	0.11	0.18	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.300926	NA	NA	NA	NA	NA	0.138	NA	4.9632
1156	6	25914801	25914801	G	A	intronic	SLC17A2	NA	NA	NA	exonic	ENSG00000112337	NA	nonsynonymous SNV	ENSG00000112337:ENST00000265425:exon10:c.C1309T:p.P437S	NA	NA	6p22.2	NA	NA	NA	NA	rs2071299	0.43	0.43	0.366	0.40016	0.4026	0.6964	0.4568	0.143	0.3998	0.39	0.71	0.41	0.16	0.4112	0.71	0.82	T	.	.	.	.	.	.	0.424	P	.	.	0.3	T	-1.033	T	0.024	T	0.052	0.806	8.236	1.68	0.366	0.040	3.143	0.805778	NA	0.79	0.389767	0.185656	NA	0.246	NA	4.9630997
1156	3	195515568	195515568	C	T	exonic	MUC4	NA	synonymous SNV	MUC4:NM_018406:exon2:c.G2883A:p.G961G	exonic	ENSG00000145113	NA	synonymous SNV	ENSG00000145113:ENST00000462323:exon2:c.G2883A:p.G961G,ENSG00000145113:ENST00000463781:exon2:c.G2883A:p.G961G,ENSG00000145113:ENST00000466475:exon2:c.G2883A:p.G961G,ENSG00000145113:ENST00000470451:exon2:c.G2883A:p.G961G,ENSG00000145113:ENST00000475231:exon2:c.G2883A:p.G961G,ENSG00000145113:ENST00000477086:exon2:c.G2883A:p.G961G,ENSG00000145113:ENST00000477756:exon2:c.G2883A:p.G961G,ENSG00000145113:ENST00000478156:exon2:c.G2883A:p.G961G,ENSG00000145113:ENST00000479406:exon2:c.G2883A:p.G961G,ENSG00000145113:ENST00000480843:exon2:c.G2883A:p.G961G	NA	NA	3q29	NA	NA	NA	NA	rs62282504	0.21	0.21	0.236	0.198882	0.2584	0.0516	0.1484	0.3283	0.1503	0.26	0.07	0.17	0.33	0.2107	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.159131	NA	NA	0.234624	0.278719	NA	0.225	NA	4.9629426
1156	1	207850879	207850879	C	T	exonic	CR1L	NA	synonymous SNV	CR1L:NM_175710:exon2:c.C243T:p.N81N	exonic	ENSG00000197721	NA	synonymous SNV	ENSG00000197721:ENST00000294997:exon1:c.C75T:p.N25N,ENSG00000197721:ENST00000508064:exon2:c.C243T:p.N81N	NA	NA	1q32.2	NA	NA	NA	NA	rs34509370	0.14	0.14	0.105	0.106829	0.2525	0.0327	0.1441	0.034	0.1053	0.25	0.04	0.18	0.03	0.1873	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.106447	NA	NA	0.264511	0.069641	NA	0.051	NA	4.9623556
1156	14	22314985	22314985	T	C	intergenic	OR4E2,DAD1	dist=180747;dist=718822	NA	NA	exonic	ENSG00000211786	NA	synonymous SNV	ENSG00000211786:ENST00000390434:exon1:c.T42C:p.T14T	NA	NA	14q11.2	NA	Name=CTCF	NA	NA	rs34825426	0.3	0.3	0.275	0.329273	0.1491	0.5288	0.255	0.3306	0.3599	0.15	0.51	0.23	0.35	0.2394	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.071813	NA	NA	0.149287	0.283367	NA	0.232	NA	4.962213
1156	17	52031925	52031925	G	A	intergenic	KIF2B,TOM1L1	dist=129352;dist=946127	NA	NA	ncRNA_exonic	ENSG00000263189	NA	NA	NA	Score=393;Name=lod=53	NA	17q22	NA	NA	NA	NA	rs79600152	0.02	0.02	0.017	0.0105831	0.0378	NA	0.0187	0.0008	0.001	0.04	NA	0.02	0.002	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.164043	NA	NA	NA	NA	NA	0.007	NA	4.9622
1156	19	6677799	6677799	G	A	downstream	C3	NA	NA	NA	UTR3	ENSG00000125730	ENST00000245907:c.*94C>T	NA	NA	NA	NA	19p13.3	NA	Name=ZNF263	NA	NA	rs11569585	0.04	0.04	0.037	0.0477236	0.0378	0.006	0.0259	0.0915	0.0573	0.04	0.01	0.03	0.08	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.744021	NA	NA	NA	NA	NA	0.043	NA	4.9622
1156	15	64263795	64263795	G	A	intronic	DAPK2	NA	NA	NA	intronic	ENSG00000035664	NA	NA	NA	NA	NA	15q22.31	NA	Name=EBF,EBF1_(C-8)	Name=14	NA	rs7180057	0.2	0.2	0.146	0.158546	0.3767	0.0079	0.3746	0.0514	0.0808	0.37	0.01	0.37	0.05	0.282	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.055949	NA	NA	0.379274	0.108538	NA	0.145	NA	4.962026
1156	1	161577669	161577669	G	A	ncRNA_exonic	HSPA7	NA	NA	NA	ncRNA_exonic	ENSG00000225217	NA	NA	NA	Score=790;Name=lod=2164	NA	1q23.3	NA	NA	NA	NA	rs61802307	0.67	0.67	0.66	0.662141	0.7048	0.6577	0.7392	0.6195	0.6258	0.7	0.66	0.71	0.6	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.268918	1.268918	NA	NA	NA	NA	0.536	NA	4.9618666
1156	19	12768843	12768843	G	T	intronic	MAN2B1	NA	NA	NA	intronic	ENSG00000104774	NA	NA	NA	NA	NA	19p13.2	NA	Name=CTCF	Name=2	NA	rs34324185	0.21	0.21	0.2	0.181909	0.3817	0.0615	0.232	0.0772	0.2065	0.37	0.05	0.27	0.08	0.2813	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.41549	NA	NA	0.375349	0.114668	NA	0.232	NA	4.961651
1156	22	30733111	30733111	C	A	exonic	SF3A1	NA	synonymous SNV	SF3A1:NM_001005409:exon13:c.G1815T:p.V605V,SF3A1:NM_005877:exon13:c.G2010T:p.V670V	exonic	ENSG00000099995	NA	synonymous SNV	ENSG00000099995:ENST00000215793:exon13:c.G2010T:p.V670V,ENSG00000099995:ENST00000439242:exon13:c.G1815T:p.V605V	NA	NA	22q12.2	NA	NA	NA	NA	rs2229807	0.18	0.18	0.184	0.153554	0.2535	0.1448	0.1556	0.1331	0.0859	0.24	0.12	0.17	0.14	0.1967	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.864266	NA	NA	0.255	0.151384	NA	0.275	NA	4.9614666
1156	2	53713338	53713338	G	A	intergenic	NONE,ASB3	dist=NONE;dist=183779	NA	NA	ncRNA_exonic	ENSG00000223897	NA	NA	NA	Score=435;Name=lod=78	NA	2p16.2	NA	NA	NA	NA	rs75179446	0.04	0.04	0.027	0.0403355	0.0388	NA	0.036	0.0976	0.0092	0.04	NA	0.04	0.07	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.019692	NA	NA	NA	NA	NA	0.029	NA	4.9612
1156	5	75371705	75371705	T	C	intergenic	POC5,SV2C	dist=358392;dist=7600	NA	NA	ncRNA_exonic	ENSG00000249777	NA	NA	NA	Score=383;Name=lod=48	NA	5q13.3	NA	NA	NA	NA	rs141381452	0.02	0.02	0.011	0.0119808	0.0388	NA	0.0101	0.0023	0.0112	0.04	NA	0.01	0.0041	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.065427	NA	NA	NA	NA	NA	NA	NA	4.9612
1156	1	183086757	183086757	A	C	exonic	LAMC1	NA	synonymous SNV	LAMC1:NM_002293:exon10:c.A1776C:p.A592A	exonic	ENSG00000135862	NA	synonymous SNV	ENSG00000135862:ENST00000258341:exon10:c.A1776C:p.A592A	Score=501;Name=lod=145	NA	1q25.3	NA	NA	NA	NA	rs2296292	0.53	0.53	0.503	0.531749	0.5636	0.628	0.6254	0.3321	0.6033	0.57	0.58	0.58	0.38	0.5724	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.44255	1.44255	NA	0.569535	0.374716	NA	0.464	NA	4.9611316
1156	1	183093875	183093875	T	C	exonic	LAMC1	NA	synonymous SNV	LAMC1:NM_002293:exon14:c.T2511C:p.N837N	exonic	ENSG00000135862	NA	synonymous SNV	ENSG00000135862:ENST00000258341:exon14:c.T2511C:p.N837N	NA	NA	1q25.3	Score=730;Name=V$LUN1_01	NA	NA	NA	rs20557	0.53	0.53	0.494	0.531749	0.5636	0.628	0.6254	0.3321	0.6033	0.57	0.58	0.58	0.38	0.5724	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.341477	NA	NA	0.569535	0.374489	NA	0.464	NA	4.9611316
1156	6	154763401	154763401	G	A	exonic	CNKSR3	NA	synonymous SNV	CNKSR3:NM_173515:exon3:c.C240T:p.N80N	exonic	ENSG00000153721	NA	synonymous SNV	ENSG00000153721:ENST00000607772:exon3:c.C240T:p.N80N	NA	NA	6q25.2	NA	NA	NA	NA	rs6557351	0.33	0.33	0.348	0.3752	0.2445	0.2857	0.3602	0.6203	0.2812	0.24	0.25	0.31	0.57	0.2599	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.103954	NA	NA	0.201163	0.580118	ID=COSM150203;OCCURENCE=1(stomach)	0.355	NA	4.9611036
1156	19	53945701	53945701	C	T	ncRNA_exonic	TPM3P9	NA	NA	NA	ncRNA_exonic	ENSG00000241015	NA	NA	NA	Score=652;Name=lod=593	NA	19q13.42	NA	NA	NA	NA	rs12984381	0.6	0.6	0.592	0.634385	0.7058	0.3988	0.6614	0.6203	0.8037	0.72	0.4	0.66	0.6	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.081701	NA	NA	NA	NA	NA	0.348	NA	4.9608666
1156	19	37441111	37441111	C	T	exonic	ZNF568	NA	synonymous SNV	ZNF568:NM_001204837:exon5:c.C864T:p.H288H,ZNF568:NM_001204836:exon6:c.C864T:p.H288H,ZNF568:NM_001204835:exon7:c.C1053T:p.H351H,ZNF568:NM_198539:exon7:c.C1056T:p.H352H	exonic	ENSG00000198453	NA	synonymous SNV	ENSG00000198453:ENST00000415168:exon5:c.C864T:p.H288H,ENSG00000198453:ENST00000587857:exon6:c.C864T:p.H288H,ENSG00000198453:ENST00000333987:exon7:c.C1056T:p.H352H	Score=403;Name=lod=58	NA	19q13.12	NA	NA	NA	NA	rs571294	0.57	0.57	0.559	0.586262	0.5656	0.3571	0.6167	0.7625	0.5838	0.58	0.36	0.62	0.76	0.5666	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.375358	NA	NA	0.573807	0.74352	NA	0.594	NA	4.9606596
1156	2	65893849	65893849	C	T	intergenic	SPRED2,MIR4778	dist=234193;dist=691532	NA	NA	ncRNA_exonic	ENSG00000214533	NA	NA	NA	Score=554;Name=lod=238	NA	2p14	NA	NA	NA	NA	rs61743052	0.04	0.04	0.041	0.0383387	0.0398	NA	0.0331	0.0923	0.0072	0.04	NA	0.04	0.09	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.436652	NA	NA	NA	NA	NA	0.029	NA	4.9602
1156	2	219219022	219219022	G	A	intergenic	PNKD,C2orf62	dist=7506;dist=2557	NA	NA	ncRNA_exonic	ENSG00000230580	NA	NA	NA	Score=747;Name=lod=1446	NA	2q35	NA	NA	NA	NA	rs73990428	0.08	0.08	0.083	0.115415	0.0398	0.1696	0.0317	0.1218	0.1881	0.04	0.15	0.04	0.11	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.309413	NA	NA	NA	NA	NA	0.051	NA	4.9602
1156	4	57906930	57906930	T	G	intronic	IGFBP7	NA	NA	NA	intronic	ENSG00000163453	NA	NA	NA	NA	NA	4q12	NA	NA	Name=14	NA	rs3755905	0.08	0.08	0.068	0.0856629	0.0398	0.1567	0.0389	0.0688	0.1155	0.04	0.16	0.04	0.07	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.411102	NA	NA	NA	NA	NA	0.058	NA	4.9602
1156	16	667311	667311	A	G	intronic	RAB40C	NA	NA	NA	intronic	ENSG00000197562	NA	NA	NA	NA	NA	16p13.3	NA	Name=FOXA1_(C-20)	NA	NA	rs74777284	0.03	0.03	0.04	0.0357428	0.0109	0.0278	0.0101	0.0719	0.0389	0.01	0.04	0.01	0.08	0.0181	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.734712	NA	NA	0.01093	0.070877	NA	0.051	NA	4.96007
1156	16	1682281	1682281	A	G	exonic	CRAMP1L	NA	synonymous SNV	CRAMP1L:NM_020825:exon3:c.A609G:p.A203A	exonic	ENSG00000007545,ENSG00000261732	NA	synonymous SNV	ENSG00000007545:ENST00000293925:exon3:c.A609G:p.A203A,ENSG00000007545:ENST00000397412:exon4:c.A609G:p.A203A,ENSG00000007545:ENST00000436138:exon4:c.A600G:p.A200A	NA	NA	16p13.3	NA	NA	NA	NA	rs3169425	0.41	0.41	0.406	0.453874	0.173	0.5605	0.3386	0.6838	0.4039	0.16	0.55	0.33	0.68	0.3578	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.260061	NA	NA	0.175915	0.577992	ID=COSM434722;OCCURENCE=1(breast)	0.341	NA	4.9599516
1156	19	53945114	53945114	G	C	ncRNA_exonic	TPM3P9	NA	NA	NA	ncRNA_exonic	ENSG00000241015	NA	NA	NA	Score=313;Name=lod=25	NA	19q13.42	NA	NA	NA	NA	rs4803124	0.6	0.6	0.56	0.636182	0.7068	0.3998	0.6614	0.6256	0.8037	0.72	0.4	0.66	0.59	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.122061	NA	NA	NA	NA	NA	0.529	NA	4.9598666
1156	19	53945250	53945250	A	T	ncRNA_exonic	TPM3P9	NA	NA	NA	ncRNA_exonic	ENSG00000241015	NA	NA	NA	Score=712;Name=lod=1044	NA	19q13.42	NA	NA	NA	NA	rs4803126	0.6	0.6	0.574	0.635982	0.7068	0.3998	0.6614	0.6248	0.8037	0.72	0.4	0.66	0.59	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.215443	NA	NA	NA	NA	NA	0.601	NA	4.9598666
1156	19	53945679	53945679	T	G	ncRNA_exonic	TPM3P9	NA	NA	NA	ncRNA_exonic	ENSG00000241015	NA	NA	NA	Score=652;Name=lod=593	NA	19q13.42	NA	NA	NA	NA	rs12986193	0.59	0.59	0.555	0.619808	0.7068	0.3998	0.6513	0.5696	0.8027	0.72	0.4	0.65	0.55	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.912488	NA	NA	NA	NA	NA	0.333	NA	4.9598666
1156	12	67706466	67706466	G	A	exonic	CAND1	NA	synonymous SNV	CAND1:NM_018448:exon15:c.G3549A:p.L1183L	exonic	ENSG00000111530	NA	synonymous SNV	ENSG00000111530:ENST00000544619:exon9:c.G2169A:p.L723L,ENSG00000111530:ENST00000545606:exon15:c.G3549A:p.L1183L	Score=751;Name=lod=1504	NA	12q15	NA	NA	NA	NA	rs1060350	0.43	0.43	0.405	0.40635	0.5905	0.3194	0.4899	0.2201	0.499	0.59	0.29	0.51	0.26	0.5201	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.499925	NA	NA	0.596395	0.278257	ID=COSM147562;OCCURENCE=1(stomach)	0.442	NA	4.9596716
1156	4	74951740	74951740	G	T	intergenic	PPBPP2,CXCL2	dist=30624;dist=11014	NA	NA	ncRNA_exonic	ENSG00000251017	NA	NA	NA	Score=452;Name=lod=92	NA	4q13.3	NA	NA	NA	NA	rs72652927	0.02	0.02	0.019	0.0211661	0.0408	NA	0.0259	0.0008	0.047	0.05	NA	0.03	0.002	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.12982	NA	NA	NA	NA	NA	0.022	NA	4.9592
1156	6	52344662	52344662	A	C	intronic	EFHC1	NA	NA	NA	intronic	ENSG00000096093	NA	NA	NA	NA	NA	6p12.2	Score=872;Name=V$OCT1_03	NA	NA	NA	rs515432	0.07	0.07	0.076	0.0722843	0.0408	NA	0.0317	0.2194	0.0092	0.04	NA	0.03	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.222999	2.222999	NA	NA	NA	NA	0.145	NA	4.9592
1156	10	116307340	116307340	C	G	intronic	ABLIM1	NA	NA	NA	intronic	ENSG00000099204	NA	NA	NA	NA	NA	10q25.3	NA	Name=GATA-1	NA	NA	rs41284354	0.02	0.02	0.01	0.013778	0.0408	NA	0.0288	0.0038	0.0031	0.03	NA	0.04	0.01	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.799545	1.799545	NA	NA	NA	NA	0.029	NA	4.9592
1156	12	59447334	59447334	A	G	intergenic	LRIG3,SLC16A7	dist=133015;dist=542487	NA	NA	ncRNA_exonic	ENSG00000257288	NA	NA	NA	Score=664;Name=lod=665	NA	12q14.1	NA	NA	NA	NA	rs80240969	0.09	0.09	0.086	0.0944489	0.0408	0.0337	0.1527	0.202	0.0256	0.04	0.03	0.12	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.153471	NA	NA	NA	NA	NA	0.072	NA	4.9592
1156	15	50086480	50086480	C	T	intergenic	DTWD1,ATP8B4	dist=149147;dist=63955	NA	NA	ncRNA_exonic	ENSG00000259388	NA	NA	NA	Score=669;Name=lod=698	NA	15q21.2	NA	NA	NA	NA	rs10519239	0.02	0.02	0.02	0.0217652	0.0408	NA	0.036	0.028	0.0061	0.04	NA	0.03	0.02	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.749087	NA	NA	NA	NA	NA	NA	NA	4.9592
1156	4	38774785	38774785	A	G	exonic	TLR10	NA	synonymous SNV	TLR10:NM_001017388:exon2:c.T2427C:p.D809D,TLR10:NM_001195106:exon3:c.T2427C:p.D809D,TLR10:NM_001195107:exon3:c.T2427C:p.D809D,TLR10:NM_001195108:exon3:c.T2385C:p.D795D,TLR10:NM_030956:exon4:c.T2427C:p.D809D	exonic	ENSG00000174123	NA	synonymous SNV	ENSG00000174123:ENST00000361424:exon2:c.T2427C:p.D809D,ENSG00000174123:ENST00000506111:exon2:c.T2427C:p.D809D,ENSG00000174123:ENST00000508334:exon2:c.T2427C:p.D809D,ENSG00000174123:ENST00000308973:exon4:c.T2427C:p.D809D	NA	NA	4p14	NA	NA	NA	NA	rs10776482	0.31	0.31	0.311	0.298722	0.2495	0.4325	0.3184	0.2126	0.3139	0.22	0.53	0.32	0.18	0.2549	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.594449	NA	NA	0.20314	0.222424	ID=COSM1429551;OCCURENCE=1(large_intestine)	0.355	NA	4.9591266
1156	4	68928537	68928537	G	A	ncRNA_exonic	LOC550113,SYT14L	NA	NA	NA	ncRNA_exonic	ENSG00000215127,ENSG00000248049	NA	NA	NA	Score=721;Name=lod=1134	NA	4q13.2	NA	NA	NA	NA	rs3819257	0.23	0.23	0.213	0.244209	0.2664	0.1349	0.4179	0.2171	0.2474	0.27	0.13	0.37	0.2	0.2403	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.830387	NA	0.27	0.20121	0.187642	NA	0.217	NA	4.9587566
1156	17	6942108	6942108	C	T	exonic	SLC16A13	NA	synonymous SNV	SLC16A13:NM_201566:exon3:c.C981T:p.S327S	exonic	ENSG00000174327	NA	synonymous SNV	ENSG00000174327:ENST00000308027:exon3:c.C981T:p.S327S	Score=605;Name=lod=383	NA	17p13.1	NA	NA	NA	NA	rs11078663	0.42	0.42	0.393	0.352037	0.6044	0.5149	0.4035	0.0469	0.3006	0.6	0.51	0.43	0.06	0.5024	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.541738	NA	NA	0.601279	0.129596	NA	0.268	NA	4.9585876
1156	8	70706585	70706585	T	C	intronic	SLCO5A1	NA	NA	NA	ncRNA_exonic	ENSG00000271113	NA	NA	NA	Score=397;Name=lod=55	NA	8q13.3	NA	NA	NA	NA	rs12550173	0.34	0.34	0.294	0.314097	0.3748	0.4563	0.451	0.0537	0.3599	0.39	0.43	0.45	0.08	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.911398	2.911398	NA	NA	NA	NA	0.254	NA	4.9585333
1156	12	99188418	99188418	C	G	intronic	ANKS1B	NA	NA	NA	ncRNA_exonic	ENSG00000258204	NA	NA	NA	Score=680;Name=lod=774	NA	12q23.1	NA	NA	NA	NA	rs73149056	0.24	0.24	0.222	0.21226	0.3748	0.12	0.2017	0.1732	0.2004	0.37	0.11	0.24	0.17	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.254123	NA	NA	NA	NA	NA	0.225	NA	4.9585333
1156	17	15608194	15608194	T	G	intronic	ZNF286A	NA	NA	NA	ncRNA_exonic	ENSG00000233966	NA	NA	NA	Score=727;Name=lod=1203	NA	17p12	NA	NA	NA	NA	rs8075077	0.48	0.48	0.41	0.508586	0.3748	0.6062	0.4222	0.5847	0.5041	0.38	0.59	0.39	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.979931	NA	NA	NA	NA	NA	0.138	NA	4.9585333
1156	12	49691567	49691567	T	C	intronic	PRPH	NA	NA	NA	ncRNA_intronic	ENSG00000258334	NA	NA	NA	NA	NA	12q13.12	NA	NA	NA	NA	rs2236746	0.17	0.17	0.193	0.182508	0.1839	0.0149	0.1225	0.3752	0.136	0.18	0.02	0.15	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.760546	NA	NA	0.191075	0.334538	NA	0.246	CLINSIG=untested;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000057162.1;CLNDSDB=.;CLNDSDBID=.	4.9583583
1156	7	128554035	128554035	G	A	intergenic	KCP,IRF5	dist=3262;dist=23959	NA	NA	ncRNA_exonic	ENSG00000224163	NA	NA	NA	Score=675;Name=lod=740	NA	7q32.1	NA	NA	NA	NA	rs117461574	0.02	0.02	0.02	0.028754	0.0417	0.001	0.0245	NA	0.0859	0.04	NA	0.03	NA	NA	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.24931	NA	0.77	NA	NA	NA	0.029	NA	4.9583
1156	11	552331	552331	G	A	intronic	LRRC56	NA	NA	NA	intronic	ENSG00000161328	NA	NA	NA	NA	NA	11p15.5	NA	Name=GR	NA	NA	rs58139375	0.02	0.02	0.014	0.0311502	0.0417	NA	0.0317	0.0113	0.0787	0.04	NA	0.05	0.01	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.693782	NA	NA	NA	NA	NA	0.08	NA	4.9583
1156	11	126136951	126136951	G	C	intronic	SRPR	NA	NA	NA	intronic	ENSG00000182934	NA	NA	NA	NA	NA	11q24.2	NA	Name=Pol2-4H8	NA	NA	rs73017356	0.02	0.02	0.014	0.0117812	0.0417	NA	0.0187	0.0015	0.002	0.04	NA	0.02	0.002	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.159177	NA	NA	NA	NA	NA	0.065	NA	4.9583
1156	18	12028812	12028812	T	C	intronic	IMPA2	NA	NA	NA	intronic	ENSG00000141401	NA	NA	NA	NA	NA	18p11.21	NA	NA	Name=3	NA	rs149833186	0.01	0.01	0.004	0.00419329	0.0129	NA	0.0101	NA	0.001	0.01	NA	0.01	NA	0.0122	0.017	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.185501	NA	NA	0.01686	0.002951	NA	0.007	NA	4.95804
1156	11	6624617	6624617	T	C	intronic	RRP8	NA	NA	NA	intronic	ENSG00000132275	NA	NA	NA	NA	NA	11p15.4	NA	Name=ETS1,E2F6,CTCF,KAP1,AP-2gamma,THAP1_(SC-98174)	Name=147	NA	rs12420389	0.22	0.22	0.194	0.194089	0.3439	0.0685	0.2205	0.1861	0.1616	0.34	0.08	0.23	0.16	0.3672	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.166031	NA	NA	0.331002	0.197452	NA	0.246	NA	4.957898
1156	19	6734131	6734131	C	G	intronic	GPR108	NA	NA	NA	intronic	ENSG00000125734	NA	NA	NA	NA	NA	19p13.3	NA	Name=FOSL1_(SC-183),HNF4G_(SC-6558),HNF4A_(H-171),Egr-1,HDAC2_(SC-6296)	Name=4	NA	rs339397	0.58	0.58	0.558	0.551118	0.5308	0.5665	0.5432	0.6415	0.4397	0.51	0.59	0.54	0.68	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.310416	NA	NA	0.511314	0.622832	NA	0.457	NA	4.957886
1156	3	108678002	108678002	G	A	intronic	MORC1	NA	NA	NA	intronic	ENSG00000114487	NA	NA	NA	NA	NA	3q13.13	NA	Name=p300,STAT3	Name=23	NA	rs2197738	0.29	0.29	0.289	0.305711	0.3678	0.1071	0.2421	0.3933	0.3732	0.37	0.08	0.3	0.41	0.3254	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.797226	NA	NA	0.349	0.399183	NA	0.377	NA	4.9578
1156	20	60881330	60881330	G	A	exonic	ADRM1	NA	synonymous SNV	ADRM1:NM_007002:exon4:c.G408A:p.A136A,ADRM1:NM_175573:exon4:c.G408A:p.A136A	exonic	ENSG00000130706	NA	synonymous SNV	ENSG00000130706:ENST00000253003:exon4:c.G408A:p.A136A	NA	NA	20q13.33	NA	Name=Pol2(phosphoS2),ZBTB33,FOSL2,USF-1	Name=23	NA	rs2427273	0.84	0.84	0.83	0.817891	0.9046	0.9752	0.8818	0.5877	0.8323	0.9	0.97	0.86	0.6	0.8765	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.371454	1.371454	NA	0.928023	0.657059	NA	0.804	NA	4.9575436
1156	1	35653783	35653783	G	C	intronic	SFPQ	NA	NA	NA	intronic	ENSG00000116560	NA	NA	NA	NA	NA	1p34.3	NA	Name=Pol2-4H8	NA	NA	rs4652873	0.39	0.39	0.384	0.39397	0.0427	0.6677	0.3963	0.6188	0.1677	0.04	0.69	0.31	0.62	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.727009	NA	NA	NA	NA	NA	0.268	NA	4.9573
1156	2	238732864	238732864	G	A	intronic	RBM44	NA	NA	NA	intronic	ENSG00000177483	NA	NA	NA	NA	NA	2q37.3	NA	NA	Name=4	NA	rs72991078	0.02	0.02	0.017	0.0159744	0.0427	NA	0.0274	0.0015	0.0164	0.04	NA	0.04	0.0041	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.793427	NA	NA	NA	NA	NA	0.072	NA	4.9573
1156	5	35068238	35068238	C	T	intronic	PRLR	NA	NA	NA	intronic	ENSG00000113494	NA	NA	NA	NA	NA	5p13.2	NA	NA	Name=19	NA	rs79469561	0.03	0.03	0.024	0.0377396	0.0427	0.0427	0.0389	0.003	0.0736	0.04	0.04	0.04	0.0041	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.170866	NA	NA	NA	NA	NA	0.022	NA	4.9573
1156	5	35068248	35068248	G	C	intronic	PRLR	NA	NA	NA	intronic	ENSG00000113494	NA	NA	NA	NA	NA	5p13.2	NA	NA	Name=19	NA	rs78373811	0.07	0.07	0.068	0.0950479	0.0427	0.0427	0.0576	0.2103	0.0736	0.04	0.04	0.06	0.16	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.902594	NA	NA	NA	NA	NA	0.051	NA	4.9573
1156	1	183072590	183072590	T	C	exonic	LAMC1	NA	synonymous SNV	LAMC1:NM_002293:exon2:c.T546C:p.C182C	exonic	ENSG00000135862	NA	synonymous SNV	ENSG00000135862:ENST00000258341:exon2:c.T546C:p.C182C	Score=555;Name=lod=241	NA	1q25.3	NA	NA	NA	NA	rs2296288	0.53	0.53	0.5	0.531949	0.5646	0.628	0.6268	0.3321	0.6022	0.58	0.58	0.58	0.38	0.5737	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.288413	1.288413	NA	0.571279	0.376078	NA	0.464	NA	4.9570876
1156	7	56151242	56151242	C	T	intronic	PHKG1	NA	NA	NA	intronic	ENSG00000164776	NA	NA	NA	NA	NA	7p11.2	NA	Name=Pol2	NA	NA	rs73126333	0.03	0.03	0.022	0.0321486	0.0437	NA	0.0922	0.0045	0.0481	0.04	NA	0.09	0.01	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.109005	NA	NA	NA	NA	NA	0.022	NA	4.9563
1156	9	2810505	2810505	T	A	intronic	KIAA0020	NA	NA	NA	intronic	ENSG00000080608	NA	NA	NA	NA	NA	9p24.2	NA	Name=GR	NA	NA	rs41272895	0.06	0.06	0.06	0.0553115	0.0437	0.0605	0.0648	0.0703	0.0348	0.04	0.08	0.05	0.07	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.28558	NA	NA	NA	NA	NA	0.094	NA	4.9563
1156	1	198288709	198288709	A	G	UTR3	NEK7	NM_133494:c.*57A>G	NA	NA	UTR3	ENSG00000151414	ENST00000367385:c.*57A>G	NA	NA	Score=329;Name=lod=29	NA	1q31.3	NA	NA	NA	NA	rs6679100	0.63	0.63	0.607	0.694089	0.3777	0.8988	0.6599	0.764	0.7382	0.37	0.89	0.61	0.75	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.303722	1.303722	NA	NA	NA	NA	0.645	NA	4.9556334
1156	17	49231623	49231623	C	G	UTR5	NME1	NM_198175:c.-112C>G	NA	NA	UTR5	ENSG00000011052,ENSG00000239672	ENST00000555572:c.-112C>G;ENST00000336097:c.-112C>G,ENST00000480143:c.-112C>G,ENST00000013034:c.-112C>G,ENST00000456492:c.-112C>G	NA	NA	NA	NA	17q21.33	NA	NA	Name=26	NA	rs34431255	0.4	0.4	0.36	0.362819	0.3777	0.3849	0.3862	0.3767	0.2894	0.37	0.4	0.43	0.42	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.165262	NA	NA	NA	NA	NA	0.442	NA	4.9556334
1156	19	56549532	56549532	A	G	exonic	NLRP5	NA	synonymous SNV	NLRP5:NM_153447:exon10:c.A2757G:p.R919R	exonic	ENSG00000171487	NA	synonymous SNV	ENSG00000171487:ENST00000390649:exon10:c.A2757G:p.R919R	NA	NA	19q13.43	NA	NA	NA	NA	rs306447	0.3	0.3	0.31	0.303115	0.2406	0.3016	0.1758	0.4834	0.2157	0.23	0.31	0.2	0.47	0.2497	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.137064	NA	NA	0.220911	0.420879	ID=COSM148767;OCCURENCE=1(stomach)	0.384	NA	4.9554556
1157	13	41437824	41437824	T	G	ncRNA_intronic	TPTE2P5	NA	NA	NA	ncRNA_exonic	ENSG00000176268	NA	NA	NA	Score=628;Name=lod=476	NA	13q14.11	NA	NA	NA	NA	rs9315790	0.45	0.45	0.401	0.42512	0.7117	0.1706	0.67	0.1664	0.5685	0.73	0.19	0.64	0.18	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.813728	1.813728	NA	NA	NA	NA	0.478	NA	4.9549666
1157	2	219513782	219513782	T	C	exonic	ZNF142	NA	synonymous SNV	ZNF142:NM_001105537:exon6:c.A849G:p.P283P	exonic	ENSG00000115568	NA	synonymous SNV	ENSG00000115568:ENST00000411696:exon5:c.A849G:p.P283P,ENSG00000115568:ENST00000449707:exon6:c.A849G:p.P283P	NA	NA	2q35	NA	NA	NA	NA	rs4674322	0.13	0.13	0.12	0.0866613	0.2704	NA	0.1441	0.0151	0.0429	0.27	NA	0.19	0.04	0.1829	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.678988	NA	NA	0.258584	0.045656	NA	0.138	NA	4.9547826
1157	6	32629680	32629680	A	G	intronic	HLA-DQB1	NA	NA	NA	ncRNA_intronic	ENSG00000241287	NA	NA	NA	NA	NA	6p21.32	NA	Name=Pol2-4H8	NA	NA	rs2854272	0.32	0.32	0.3	0.325679	0.3787	0.249	0.3473	0.3464	0.3067	0.35	0.24	0.36	0.34	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.139789	NA	NA	NA	NA	NA	0.13	NA	4.9546333
1157	15	52510670	52510670	A	G	intronic	MYO5C	NA	NA	NA	intronic	ENSG00000128833	NA	NA	NA	NA	NA	15q21.2	NA	NA	Name=4	NA	rs3751610	0.04	0.04	0.028	0.0369409	0.0109	0.1111	0.0403	0.0053	0.0276	0.01	0.11	0.03	0.01	0.0244	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.088972	NA	NA	0.010308	0.010995	NA	0.007	NA	4.954392
1157	1	81674838	81674838	A	C	intergenic	NONE,LPHN2	dist=NONE;dist=591244	NA	NA	ncRNA_exonic	ENSG00000235089	NA	NA	NA	Score=736;Name=lod=1309	NA	1p31.1	NA	NA	NA	NA	rs41342747	0.09	0.09	0.101	0.10643	0.0457	0.0317	0.0706	0.2685	0.0521	0.03	0.03	0.07	0.27	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.775169	NA	NA	NA	NA	NA	0.152	NA	4.9543
1157	3	12299660	12299660	G	A	intergenic	SYN2,PPARG	dist=66128;dist=29689	NA	NA	ncRNA_exonic	ENSG00000236062	NA	NA	NA	Score=546;Name=lod=220	NA	3p25.2	NA	NA	NA	NA	rs35877199	0.03	0.03	0.035	0.0383387	0.0457	0.0228	0.0159	0.025	0.0808	0.05	0.03	0.03	0.02	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.053611	2.053611	NA	NA	NA	NA	0.036	NA	4.9543
1157	4	83196888	83196888	C	T	intergenic	RASGEF1B,HNRNPD	dist=803827;dist=77579	NA	NA	ncRNA_exonic	ENSG00000234568	NA	NA	NA	NA	NA	4q21.22	NA	NA	Name=2	NA	rs72658906	0.02	0.02	0.014	0.0125799	0.0457	NA	0.013	0.0038	0.0031	0.04	NA	0.02	NA	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.486698	NA	0.01	NA	NA	NA	0.072	NA	4.9543
1157	19	52994491	52994491	A	G	intronic	ZNF578	NA	NA	NA	intronic	ENSG00000258405	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	NA	NA	NA	NA	0.0113818	0.0457	NA	0.0144	0.0008	NA	NA	NA	NA	NA	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.798566	NA	NA	NA	NA	NA	0.014	NA	4.9543
1157	5	109220991	109220991	C	T	ncRNA_exonic	LOC100289673	NA	NA	NA	ncRNA_exonic	ENSG00000253224	NA	NA	NA	Score=304;Name=lod=23	NA	5q21.3	NA	NA	NA	NA	rs13360436	0.6	0.6	0.636	0.580671	0.7127	0.2808	0.5836	0.7905	0.4683	0.72	0.25	0.61	0.81	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.66258	NA	NA	NA	NA	NA	0.746	NA	4.9539666
1157	1	112192122	112192122	T	C	intronic	RAP1A	NA	NA	NA	ncRNA_exonic	ENSG00000215867	NA	NA	NA	NA	Name=Osteoporosis	1p13.2	NA	NA	NA	NA	rs494453	0.43	0.43	0.386	0.429313	0.3797	0.4712	0.464	0.4697	0.3579	0.39	0.44	0.43	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.247787	NA	NA	NA	NA	NA	0.362	NA	4.9536333
1157	7	98995465	98995465	G	A	intronic	PDAP1	NA	NA	NA	intronic	ENSG00000106244	NA	NA	NA	NA	NA	7q22.1	NA	Name=Pol2	NA	NA	rs140429100	0.01	0.01	NA	0.00399361	0.0119	0.001	0.0058	0.0008	0.002	0.01	NA	0.01	0.002	0.0153	0.019	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.058124	NA	NA	0.019419	0.003177	NA	NA	NA	4.953381
1157	20	3784110	3784110	C	T	exonic	CDC25B	NA	synonymous SNV	CDC25B:NM_021872:exon13:c.C1293T:p.I431I,CDC25B:NM_004358:exon14:c.C1374T:p.I458I,CDC25B:NM_021873:exon14:c.C1416T:p.I472I	exonic	ENSG00000101224	NA	synonymous SNV	ENSG00000101224:ENST00000340833:exon13:c.C1293T:p.I431I,ENSG00000101224:ENST00000379598:exon13:c.C1143T:p.I381I,ENSG00000101224:ENST00000245960:exon14:c.C1416T:p.I472I,ENSG00000101224:ENST00000344256:exon14:c.C1224T:p.I408I,ENSG00000101224:ENST00000439880:exon14:c.C1374T:p.I458I	NA	NA	20p13	NA	NA	NA	NA	rs1056720	0.24	0.24	0.222	0.230032	0.2207	0.377	0.2925	0.1036	0.2147	0.22	0.34	0.28	0.12	0.2474	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.101288	NA	NA	0.245233	0.126419	NA	0.268	NA	4.9533336
1157	3	12299365	12299365	A	G	intergenic	SYN2,PPARG	dist=65833;dist=29984	NA	NA	ncRNA_exonic	ENSG00000236062	NA	NA	NA	Score=459;Name=lod=98	NA	3p25.2	NA	NA	NA	NA	rs71304096	0.03	0.03	0.029	0.038738	0.0467	0.0228	0.0159	0.025	0.0818	0.05	0.03	0.03	0.02	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.415229	NA	NA	NA	NA	NA	0.036	NA	4.9533
1157	3	12299615	12299615	C	A	intergenic	SYN2,PPARG	dist=66083;dist=29734	NA	NA	ncRNA_exonic	ENSG00000236062	NA	NA	NA	Score=546;Name=lod=220	NA	3p25.2	NA	NA	NA	NA	rs71304097	0.03	0.03	0.038	0.038738	0.0467	0.0228	0.0159	0.025	0.0818	0.05	0.03	0.03	0.02	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.140448	NA	NA	NA	NA	NA	0.036	NA	4.9533
1157	3	12299722	12299722	G	A	intergenic	SYN2,PPARG	dist=66190;dist=29627	NA	NA	ncRNA_exonic	ENSG00000236062	NA	NA	NA	Score=546;Name=lod=220	NA	3p25.2	NA	NA	NA	NA	rs35057507	0.03	0.03	0.027	0.038738	0.0467	0.0228	0.0159	0.025	0.0818	0.05	0.03	0.03	0.02	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.066498	NA	NA	NA	NA	NA	0.036	NA	4.9533
1157	6	50682765	50682765	C	G	intronic	TFAP2D	NA	NA	NA	intronic	ENSG00000008197	NA	NA	NA	NA	NA	6p12.3	NA	NA	Name=3	NA	rs45599639	0.02	0.02	0.012	0.014377	0.0467	NA	0.0231	0.0015	0.0072	0.05	NA	0.03	NA	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.337476	2.337476	NA	NA	NA	NA	NA	NA	4.9533
1157	18	47375932	47375932	C	G	intronic	MYO5B	NA	NA	NA	ncRNA_intronic	ENSG00000267322	NA	NA	NA	NA	NA	18q21.1	NA	Name=Pol2(b)	Name=16	NA	rs488890	0.36	0.36	0.369	0.354034	0.4891	0.123	0.3444	0.4501	0.3303	0.47	0.13	0.39	0.43	0.4095	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.215098	NA	NA	0.482288	0.424938	NA	0.384	NA	4.9524453
1157	1	215044171	215044171	C	A	intergenic	CENPF,KCNK2	dist=206257;dist=134714	NA	NA	ncRNA_exonic	ENSG00000185221	NA	NA	NA	Score=673;Name=lod=724	NA	1q41	NA	NA	NA	NA	rs28464181	0.02	0.02	0.029	0.0175719	0.0477	NA	0.0187	0.0023	0.0245	0.05	NA	0.02	0.01	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.181905	NA	NA	NA	NA	NA	0.007	NA	4.9523
1157	4	66082691	66082691	C	T	intergenic	LOC401134,EPHA5	dist=212473;dist=102590	NA	NA	ncRNA_exonic	ENSG00000249351	NA	NA	NA	Score=688;Name=lod=833	NA	4q13.1	NA	NA	NA	NA	rs72638625	0.05	0.05	0.037	0.0461262	0.0477	0.0198	0.062	0.0537	0.0501	0.05	0.03	0.06	0.05	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.76512	NA	NA	NA	NA	NA	0.08	NA	4.9523
1157	11	90015854	90015854	G	A	intergenic	CHORDC1,MIR4490	dist=59322;dist=273088	NA	NA	ncRNA_exonic	ENSG00000214391	NA	NA	NA	Score=892;Name=lod=5600	NA	11q14.3	NA	NA	NA	NA	rs112217744	0.02	0.02	0.024	0.0127796	0.0477	NA	0.0101	0.003	0.0051	0.05	0.0017	0.02	0.01	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.303123	1.303123	0	NA	NA	NA	0.014	NA	4.9523
1157	19	15890625	15890625	C	G	ncRNA_exonic	CYP4F24P	NA	NA	NA	ncRNA_exonic	ENSG00000267594	NA	NA	NA	NA	NA	19p13.12	NA	NA	Name=19	NA	rs11673423	0.56	0.56	0.529	0.542732	0.7147	0.2679	0.5807	0.5915	0.5562	0.7	0.27	0.66	0.59	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.315104	NA	1	NA	NA	NA	0.471	NA	4.9519666
1157	2	207174316	207174316	T	C	exonic	ZDBF2	NA	synonymous SNV	ZDBF2:NM_020923:exon5:c.T5064C:p.S1688S	exonic	ENSG00000204186	NA	synonymous SNV	ENSG00000204186:ENST00000374423:exon5:c.T5064C:p.S1688S	NA	NA	2q33.3	Score=807;Name=V$CEBP_C	NA	NA	NA	rs3732084	0.48	0.48	0.467	0.475639	0.5706	0.3562	0.6182	0.3812	0.5276	0.57	0.36	0.59	0.42	0.5394	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.236291	NA	NA	0.605033	0.464083	NA	0.457	NA	4.9516336
1157	19	56392920	56392920	C	T	exonic	NLRP4	NA	synonymous SNV	NLRP4:NM_134444:exon10:c.C2952T:p.D984D	exonic	ENSG00000160505	NA	synonymous SNV	ENSG00000160505:ENST00000587891:exon8:c.C2727T:p.D909D,ENSG00000160505:ENST00000346986:exon9:c.C2784T:p.D928D,ENSG00000160505:ENST00000301295:exon10:c.C2952T:p.D984D	NA	NA	19q13.43	NA	NA	NA	NA	rs12975929	0.21	0.21	0.164	0.221845	0.2376	0.2589	0.3256	0.0151	0.3732	0.25	0.27	0.29	0.03	0.2495	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.498542	NA	NA	0.228023	0.052429	NA	0.13	NA	4.9515436
1157	1	3427562	3427562	C	T	intronic	MEGF6	NA	NA	NA	intronic	ENSG00000162591	NA	NA	NA	NA	NA	1p36.32	NA	Name=Egr-1	NA	NA	rs114650222	0.05	0.05	0.042	0.0591054	0.0487	0.1032	0.0519	0.0076	0.0992	0.05	0.09	0.06	0.01	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.409131	NA	NA	NA	NA	NA	0.036	NA	4.9513
1157	6	153280527	153280527	T	C	intergenic	VIP,FBXO5	dist=199625;dist=11131	NA	NA	ncRNA_exonic	ENSG00000220745	NA	NA	NA	Score=278;Name=lod=18	NA	6q25.2	NA	NA	NA	NA	rs73006589	0.02	0.02	0.011	0.014976	0.0487	NA	0.0245	0.0023	0.0061	0.05	NA	0.03	0.01	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.113793	NA	NA	NA	NA	ID=COSN167913;OCCURENCE=1(large_intestine)	0.051	NA	4.9513
1157	7	65970570	65970570	T	G	intergenic	LINC00174,LOC493754	dist=105175;dist=47983	NA	NA	ncRNA_exonic	ENSG00000179342	NA	NA	NA	Score=734;Name=lod=1285	NA	7q11.21	NA	NA	NA	NA	rs118065642	0.02	0.02	0.023	0.0161741	0.0487	NA	0.0231	0.0023	0.0133	0.05	0.0017	0.03	0.0041	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.586046	NA	NA	NA	NA	NA	0.014	NA	4.9513
1157	6	41753084	41753084	C	T	exonic	PRICKLE4	NA	synonymous SNV	PRICKLE4:NM_013397:exon6:c.C388T:p.L130L	exonic	ENSG00000124593	NA	synonymous SNV	ENSG00000124593:ENST00000394259:exon3:c.C268T:p.L90L,ENSG00000124593:ENST00000394260:exon3:c.C268T:p.L90L,ENSG00000124593:ENST00000394263:exon4:c.C388T:p.L130L,ENSG00000124593:ENST00000335515:exon5:c.C388T:p.L130L,ENSG00000124593:ENST00000359201:exon5:c.C388T:p.L130L,ENSG00000124593:ENST00000458694:exon6:c.C388T:p.L130L	NA	NA	6p21.1	NA	NA	NA	NA	rs9394831	0.19	0.19	0.163	0.16274	0.2525	0.3016	0.1297	0.0159	0.1493	0.26	0.28	0.14	0.02	0.2064	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.525337	NA	NA	0.256977	0.054925	NA	0.138	NA	4.9507896
1157	9	125424507	125424507	A	C	exonic	OR1L1	NA	synonymous SNV	OR1L1:NM_001005236:exon1:c.A513C:p.S171S	exonic	ENSG00000173679	NA	synonymous SNV	ENSG00000173679:ENST00000309623:exon1:c.A513C:p.S171S,ENSG00000173679:ENST00000373686:exon1:c.A663C:p.S221S	NA	NA	9q33.2	NA	NA	NA	NA	rs70156	0.41	0.41	0.427	0.44988	0.2147	0.5089	0.3213	0.7292	0.3446	0.21	0.52	0.29	0.69	0.3024	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.163854	NA	NA	0.198837	0.652973	NA	0.449	NA	4.9507296
1157	5	178409856	178409856	C	T	intronic	GRM6	NA	NA	NA	ncRNA_intronic	ENSG00000254035	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs2071248	0.45	0.45	0.432	0.455871	0.3827	0.6161	0.4971	0.3828	0.4356	0.37	0.59	0.48	0.36	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.431334	NA	NA	NA	NA	NA	0.529	CLINSIG=untested;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000086051.1;CLNDSDB=.;CLNDSDBID=.	4.9506333
1157	1	157768000	157768000	G	C	exonic	FCRL1	NA	synonymous SNV	FCRL1:NM_001159397:exon7:c.C948G:p.T316T,FCRL1:NM_001159398:exon8:c.C1065G:p.T355T,FCRL1:NM_052938:exon8:c.C1065G:p.T355T	exonic	ENSG00000163534	NA	synonymous SNV	ENSG00000163534:ENST00000358292:exon7:c.C948G:p.T316T,ENSG00000163534:ENST00000368176:exon8:c.C1065G:p.T355T,ENSG00000163534:ENST00000491942:exon8:c.C1065G:p.T355T	NA	NA	1q23.1	NA	NA	NA	NA	rs3811024	0.24	0.24	0.239	0.23123	0.2406	0.1855	0.2032	0.3434	0.137	0.24	0.17	0.22	0.32	0.2317	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.202973	NA	NA	0.243953	0.313436	NA	0.217	NA	4.9504136
1157	4	38775040	38775040	A	G	exonic	TLR10	NA	synonymous SNV	TLR10:NM_001017388:exon2:c.T2172C:p.H724H,TLR10:NM_001195106:exon3:c.T2172C:p.H724H,TLR10:NM_001195107:exon3:c.T2172C:p.H724H,TLR10:NM_001195108:exon3:c.T2130C:p.H710H,TLR10:NM_030956:exon4:c.T2172C:p.H724H	exonic	ENSG00000174123	NA	synonymous SNV	ENSG00000174123:ENST00000361424:exon2:c.T2172C:p.H724H,ENSG00000174123:ENST00000506111:exon2:c.T2172C:p.H724H,ENSG00000174123:ENST00000508334:exon2:c.T2172C:p.H724H,ENSG00000174123:ENST00000308973:exon4:c.T2172C:p.H724H	NA	NA	4p14	NA	NA	NA	NA	rs10776483	0.31	0.31	0.327	0.298722	0.2495	0.4325	0.3184	0.2126	0.3139	0.22	0.53	0.32	0.18	0.2638	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.469321	NA	NA	0.203023	0.222651	NA	0.362	NA	4.9503436
1157	1	35908451	35908451	T	C	intronic	KIAA0319L	NA	NA	NA	intronic	ENSG00000142687	NA	NA	NA	NA	NA	1p34.3	NA	NA	Name=16	NA	rs2275247	0.44	0.44	0.431	0.452276	0.0497	0.7659	0.3674	0.7201	0.2413	0.04	0.8	0.33	0.72	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.54055	2.54055	NA	NA	NA	NA	0.319	NA	4.9503
1157	1	54307295	54307295	T	C	intergenic	TMEM48,YIPF1	dist=3070;dist=10097	NA	NA	ncRNA_exonic	ENSG00000229687	NA	NA	NA	Score=623;Name=lod=453	NA	1p32.3	NA	NA	NA	NA	rs7538888	0.12	0.12	0.14	0.139976	0.0497	0.004	0.0807	0.441	0.0082	0.04	0.0035	0.07	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.258604	NA	NA	NA	NA	NA	0.174	NA	4.9503
1157	1	113711896	113711896	T	C	intergenic	LRIG2,LOC643441	dist=44554;dist=27508	NA	NA	ncRNA_exonic	ENSG00000233839	NA	NA	NA	Score=570;Name=lod=276	NA	1p13.2	NA	NA	NA	NA	rs78286988	0.03	0.03	0.03	0.028155	0.0497	0.0218	0.0303	0.0083	0.0378	0.05	0.02	0.02	0.01	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.282307	NA	NA	NA	NA	NA	0.029	NA	4.9503
1157	4	38776180	38776180	C	A	exonic	TLR10	NA	synonymous SNV	TLR10:NM_001017388:exon2:c.G1032T:p.P344P,TLR10:NM_001195106:exon3:c.G1032T:p.P344P,TLR10:NM_001195107:exon3:c.G1032T:p.P344P,TLR10:NM_001195108:exon3:c.G990T:p.P330P,TLR10:NM_030956:exon4:c.G1032T:p.P344P	exonic	ENSG00000174123	NA	synonymous SNV	ENSG00000174123:ENST00000361424:exon2:c.G1032T:p.P344P,ENSG00000174123:ENST00000506111:exon2:c.G1032T:p.P344P,ENSG00000174123:ENST00000508334:exon2:c.G1032T:p.P344P,ENSG00000174123:ENST00000308973:exon4:c.G1032T:p.P344P	NA	NA	4p14	NA	NA	NA	NA	rs11096956	0.31	0.31	0.323	0.298522	0.2495	0.4325	0.3184	0.2118	0.3139	0.22	0.53	0.32	0.18	0.2637	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.433134	NA	NA	0.203256	0.222298	NA	0.362	NA	4.9502106
1157	16	89800458	89800458	G	A	intronic	ZNF276	NA	NA	NA	intronic	ENSG00000158805	NA	NA	NA	NA	NA	16q24.3	NA	Name=Pol2,Pol2(phosphoS2)	NA	NA	rs113797466	0.01	0.01	0.003	0.0115815	0.0099	0.001	0.0115	0.0008	0.0389	0.01	0.0017	0.02	0.0041	0.0199	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.752997	NA	NA	0.02	0.003185	NA	NA	NA	4.9502
1157	2	132266142	132266142	G	C	ncRNA_exonic	LOC150776	NA	NA	NA	ncRNA_exonic	ENSG00000152117	NA	NA	NA	Score=594;Name=lod=347	NA	2q21.1	NA	NA	NA	NA	rs12691988	0.45	0.45	0.451	0.511981	0.3231	0.6845	0.5331	0.6225	0.364	0.26	0.62	0.45	0.56	0.3934	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.436821	NA	NA	NA	NA	NA	0.464	NA	4.9501666
1157	1	21584128	21584128	G	A	intronic	ECE1	NA	NA	NA	intronic	ENSG00000117298	NA	NA	NA	NA	NA	1p36.12	NA	NA	Name=8	NA	rs41497052	0.01	0.01	0.006	0.00698882	0.0169	NA	0.0173	0.0008	0.0051	0.01	NA	0.02	0.002	0.0138	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.515145	NA	NA	0.019302	0.00227	NA	0.007	NA	4.949998
1157	8	30095403	30095403	A	G	ncRNA_intronic	MIR548O2	NA	NA	NA	ncRNA_exonic	ENSG00000248159	NA	NA	NA	Score=771;Name=lod=1813	NA	8p12	NA	NA	NA	NA	rs7008562	0.52	0.52	0.498	0.504193	0.7167	0.255	0.6167	0.4357	0.5552	0.72	0.21	0.66	0.46	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.191189	NA	NA	NA	NA	NA	0.551	NA	4.9499666
1157	9	135961796	135961796	C	T	ncRNA_exonic	CELP	NA	NA	NA	ncRNA_exonic	ENSG00000170827	NA	NA	NA	Score=349;Name=lod=35	NA	9q34.2	NA	NA	NA	NA	rs10901233	0.29	0.29	0.163	0.227037	0.4105	0.2113	0.4078	0.0953	0.1043	0.39	0.22	0.41	0.12	0.3063	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.283002	1.283002	NA	NA	NA	NA	0.232	NA	4.9498666
1157	14	103878774	103878774	C	G	intronic	MARK3	NA	NA	NA	ncRNA_exonic	ENSG00000244691	NA	NA	NA	Score=750;Name=lod=1489	NA	14q32.32	NA	NA	NA	NA	rs12882130	0.28	0.28	0.244	0.236222	0.3837	0.2589	0.4092	0.062	0.1738	0.39	0.26	0.43	0.05	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.957236	NA	NA	NA	NA	NA	0.29	NA	4.9496333
1157	5	161113004	161113004	G	A	exonic	GABRA6	NA	synonymous SNV	GABRA6:NM_000811:exon1:c.G9A:p.S3S	exonic	ENSG00000145863	NA	synonymous SNV	ENSG00000145863:ENST00000274545:exon1:c.G9A:p.S3S,ENSG00000145863:ENST00000523217:exon1:c.G9A:p.S3S	NA	NA	5q34	NA	NA	NA	NA	rs13188991	0.13	0.13	0.131	0.0992412	0.2664	0.0655	0.1124	0.0083	0.0757	0.25	0.07	0.13	0.01	0.1893	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.580719	NA	NA	0.261512	0.043577	NA	0.13	NA	4.9494546
1157	8	145665761	145665761	G	A	exonic	TONSL	NA	synonymous SNV	TONSL:NM_013432:exon10:c.C1263T:p.A421A	exonic	ENSG00000160949	NA	synonymous SNV	ENSG00000160949:ENST00000409379:exon10:c.C1263T:p.A421A	Score=349;Name=lod=35	NA	8q24.3	NA	NA	NA	NA	rs2229313	0.49	0.49	0.466	0.427516	0.5994	0.372	0.5014	0.326	0.3926	0.61	0.41	0.52	0.37	0.5197	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.245006	NA	0.71	0.598256	0.344616	NA	0.413	NA	4.9493106
1157	1	27306825	27306825	G	A	intergenic	C1orf172,TRNP1	dist=19924;dist=13370	NA	NA	ncRNA_exonic	ENSG00000172746	NA	NA	NA	Score=711;Name=lod=1036	NA	1p36.11	NA	NA	NA	NA	rs12737292	0.04	0.04	0.034	0.0401358	0.0507	0.005	0.036	0.0613	0.0399	0.04	0.01	0.04	0.07	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.12394	NA	NA	NA	NA	NA	0.043	NA	4.9493
1157	14	103574968	103574968	G	C	intronic	EXOC3L4	NA	NA	NA	intronic	ENSG00000205436	NA	NA	NA	NA	NA	14q32.32	NA	Name=ZBTB7A_(SC-34508)	NA	NA	rs41301467	0.02	0.02	0.015	0.0191693	0.0507	0.001	0.0072	0.0008	0.0389	0.05	0.0017	0.01	0.002	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.77049	NA	NA	NA	NA	NA	0.101	NA	4.9493
1157	15	72902187	72902187	G	A	intergenic	MIR630,GOLGA6B	dist=22533;dist=44851	NA	NA	ncRNA_exonic	ENSG00000260144	NA	NA	NA	Score=509;Name=lod=156	NA	15q24.1	NA	NA	NA	NA	rs72735194	0.12	0.12	0.109	0.131589	0.0507	0.002	0.1484	0.3646	0.0215	0.03	0.0035	0.13	0.37	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.25351	NA	NA	NA	NA	NA	0.116	NA	4.9493
1157	22	46774673	46774673	T	C	intronic	CELSR1	NA	NA	NA	intronic	ENSG00000075275	NA	NA	NA	NA	NA	22q13.31	NA	NA	Name=3	NA	rs55896501	0.07	0.07	0.067	0.0698882	0.0507	NA	0.0476	0.1876	0.0184	0.04	NA	0.05	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.123359	NA	NA	NA	NA	NA	0.051	NA	4.9493
1157	16	81193344	81193344	T	C	exonic	PKD1L2	NA	unknown	UNKNOWN	exonic	ENSG00000166473	NA	unknown	UNKNOWN	NA	NA	16q23.2	NA	NA	NA	NA	rs143351043	0.01	0.01	0.01	0.0091853	0.0139	NA	0.013	0.0023	0.0204	0.01	NA	0.01	0.0041	0.0172	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.026326	NA	NA	0.019938	0.002509	NA	0.014	NA	4.948962
1157	1	183105534	183105534	T	C	exonic	LAMC1	NA	synonymous SNV	LAMC1:NM_002293:exon25:c.T4128C:p.R1376R	exonic	ENSG00000135862	NA	synonymous SNV	ENSG00000135862:ENST00000258341:exon25:c.T4128C:p.R1376R	NA	NA	1q25.3	Score=806;Name=V$PBX1_02	NA	NA	NA	rs20560	0.55	0.55	0.523	0.560503	0.5666	0.625	0.6354	0.4539	0.5787	0.58	0.57	0.6	0.48	0.5808	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.160586	NA	NA	0.570349	0.480481	NA	0.464	NA	4.9489176
1157	15	85958673	85958673	G	T	intronic	AKAP13	NA	NA	NA	ncRNA_exonic	ENSG00000259630	NA	NA	NA	Score=481;Name=lod=120	NA	15q25.3	NA	NA	NA	NA	rs35451550	0.19	0.19	0.149	0.151957	0.3847	0.0327	0.2349	0.0166	0.1595	0.38	0.03	0.26	0.02	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.721701	NA	NA	NA	NA	NA	0.196	NA	4.9486333
1157	22	50705304	50705304	C	T	intronic	MAPK11	NA	NA	NA	exonic	ENSG00000185386	NA	stopgain	ENSG00000185386:ENST00000449719:exon6:c.G345A:p.W115X	NA	NA	22q13.33	NA	NA	NA	NA	rs760747	0.23	0.23	0.224	0.217851	0.2326	0.2163	0.3545	0.1241	0.2342	0.24	0.24	0.37	0.12	0.3189	0.37	0.52	T	.	.	.	.	.	.	0.000	P	.	.	.	.	.	.	.	.	.	2.836	15.45	0.669	0.627	-0.732	.	2.836031	2.836031	NA	NA	NA	NA	0.217	NA	4.9485
1157	12	52886490	52886490	A	G	exonic	KRT6A	NA	synonymous SNV	KRT6A:NM_005554:exon1:c.T483C:p.A161A	exonic	ENSG00000205420	NA	synonymous SNV	ENSG00000205420:ENST00000330722:exon1:c.T483C:p.A161A	NA	NA	12q13.13	Score=776;Name=V$PAX5_01	NA	NA	NA	rs711317	0.53	0.53	0.411	0.449081	0.6044	0.6319	0.6023	0.1331	0.4192	0.59	0.71	0.62	0.14	0.5303	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.9466	NA	NA	0.583605	0.197004	ID=COSM1128560;OCCURENCE=1(prostate)	0.558	NA	4.9483616
1157	8	87670315	87670315	G	C	intronic	CNGB3	NA	NA	NA	ncRNA_exonic	ENSG00000205333	NA	NA	NA	Score=583;Name=lod=311	NA	8q21.3	NA	NA	NA	NA	rs3779799	0.44	0.44	0.353	0.434904	0.3857	0.5357	0.5447	0.2761	0.5184	0.41	0.54	0.49	0.32	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.970437	NA	NA	NA	NA	NA	0.413	NA	4.9476333
1157	12	120720246	120720246	T	C	intergenic	PXN,SIRT4	dist=16672;dist=19878	NA	NA	ncRNA_exonic	ENSG00000123009	NA	NA	NA	Score=569;Name=lod=274	NA	12q24.31	NA	NA	NA	NA	rs61140476	0.07	0.07	0.062	0.0702875	0.0527	0.0873	0.1729	0.0144	0.0736	0.05	0.09	0.14	0.03	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.554077	1.554077	NA	NA	NA	NA	0.058	NA	4.9473
1157	13	25940203	25940203	C	G	intergenic	NUPL1,ATP8A2	dist=23642;dist=6006	NA	NA	ncRNA_exonic	ENSG00000234152	NA	NA	NA	Score=581;Name=lod=305	NA	13q12.13	NA	NA	NA	NA	rs77400805	0.08	0.08	0.108	0.0748802	0.0527	0.1121	0.0375	0.1021	0.0491	0.05	0.13	0.03	0.12	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.113719	NA	NA	NA	NA	NA	0.072	NA	4.9473
1157	19	9266544	9266544	T	C	intronic	ZNF317	NA	NA	NA	intronic	ENSG00000130803	NA	NA	NA	NA	NA	19p13.2	NA	Name=PU.1	NA	NA	rs79188675	0.1	0.1	0.089	0.0822684	0.0527	0.0972	0.0764	0.1233	0.046	0.06	0.1	0.08	0.15	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.125955	NA	NA	NA	NA	NA	0.08	NA	4.9473
1157	19	9270654	9270654	T	C	intronic	ZNF317	NA	NA	NA	intronic	ENSG00000130803	NA	NA	NA	NA	NA	19p13.2	NA	Name=MafK_(SC-477),MafF_(M8194)	NA	NA	rs112329499	0.1	0.1	0.096	0.091254	0.0527	0.0972	0.0836	0.1536	0.046	0.06	0.1	0.09	0.18	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.143105	NA	NA	NA	NA	NA	0.101	NA	4.9473
1157	22	20109670	20109670	C	T	intronic	RANBP1	NA	NA	NA	intronic	ENSG00000099901	NA	NA	NA	NA	NA	22q11.21	NA	Name=Pol2-4H8	NA	NA	rs72490649	0.04	0.04	0.044	0.0501198	0.0527	0.0813	0.0101	0.0045	0.1053	0.06	0.07	0.01	0.0041	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.145943	NA	NA	NA	NA	NA	0.043	NA	4.9473
1157	9	98221861	98221861	T	C	intronic	PTCH1	NA	NA	NA	intronic	ENSG00000185920	NA	NA	NA	NA	NA	9q22.32	NA	Name=GATA-2	Name=4	NA	rs2236406	0.4	0.4	0.408	0.392572	0.338	0.3433	0.232	0.6899	0.2117	0.35	0.34	0.22	0.68	0.3563	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.633634	NA	NA	0.358488	0.646164	NA	0.348	NA	4.947212
1157	7	100610026	100610026	A	C	intergenic	ACHE,MUC12	dist=116485;dist=2878	NA	NA	ncRNA_intronic	ENSG00000225946	NA	NA	NA	NA	NA	7q22.1	NA	Name=CTCF	Name=16	NA	rs10229209	NA	NA	0.587	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5356	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.783587	NA	NA	0.517328	0.525685	NA	0.536	NA	4.947072
1157	15	41815405	41815405	C	G	intronic	RPAP1	NA	NA	NA	intronic	ENSG00000103932	NA	NA	NA	NA	NA	15q15.1	NA	NA	Name=9	NA	rs138545490	0.01	0.01	0.005	0.00599042	0.0169	NA	0.0086	0.0023	0.0041	0.02	NA	0.01	NA	0.0163	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.053195	NA	NA	0.019884	0.003179	NA	0.014	NA	4.946916
1157	2	132275343	132275343	G	T	ncRNA_exonic	LOC150776	NA	NA	NA	ncRNA_exonic	ENSG00000152117	NA	NA	NA	Score=644;Name=lod=552	NA	2q21.1	NA	NA	NA	NA	rs12691998	0.5	0.5	0.499	0.510982	0.3231	0.6845	0.5331	0.618	0.365	0.3	0.66	0.49	0.63	0.3967	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.26978	NA	NA	NA	NA	NA	0.464	NA	4.9468666
1157	6	30882856	30882856	A	G	intronic	VARS2	NA	NA	NA	intronic	ENSG00000137411	NA	NA	NA	NA	NA	6p21.33	NA	Name=Pol2-4H8,TAF1,TAL1_(SC-12984),ZBTB7A_(SC-34508)	Name=7	NA	rs1264300	0.24	0.24	0.23	0.222045	0.3559	0.247	0.2075	0.0983	0.2362	0.35	0.28	0.2	0.06	0.3233	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.914626	1.914626	NA	0.37403	0.143141	NA	0.283	NA	4.94677
1157	10	3124687	3124687	C	T	intronic	PFKP	NA	NA	NA	intronic	ENSG00000067057	NA	NA	NA	NA	NA	10p15.2	NA	Name=Pol2	NA	NA	rs41288713	0.01	0.01	0.006	0.00638978	0.0189	NA	0.0101	0.0015	0.0041	0.02	NA	0.01	NA	0.0132	0.021	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.41998	NA	NA	0.021163	0.003858	NA	0.007	NA	4.946737
1157	17	4337412	4337412	C	G	exonic	SPNS3	NA	synonymous SNV	SPNS3:NM_182538:exon1:c.C150G:p.V50V	exonic	ENSG00000182557	NA	synonymous SNV	ENSG00000182557:ENST00000355530:exon1:c.C150G:p.V50V,ENSG00000182557:ENST00000575194:exon1:c.C150G:p.V50V	NA	NA	17p13.2	NA	NA	NA	NA	rs3809853	0.23	0.23	0.251	0.232029	0.2396	0.125	0.1585	0.407	0.1503	0.24	0.12	0.17	0.39	0.2266	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.757805	NA	NA	0.253837	0.371993	NA	0.275	NA	4.9466296
1157	2	220431631	220431631	G	T	exonic	OBSL1	NA	synonymous SNV	OBSL1:NM_001173408:exon5:c.C2055A:p.A685A,OBSL1:NM_001173431:exon5:c.C2055A:p.A685A,OBSL1:NM_015311:exon5:c.C2055A:p.A685A	exonic	ENSG00000124006	NA	synonymous SNV	ENSG00000124006:ENST00000265318:exon5:c.C2055A:p.A685A,ENSG00000124006:ENST00000289656:exon5:c.C816A:p.A272A,ENSG00000124006:ENST00000373873:exon5:c.C2055A:p.A685A,ENSG00000124006:ENST00000373876:exon5:c.C2055A:p.A685A,ENSG00000124006:ENST00000404537:exon5:c.C2055A:p.A685A,ENSG00000124006:ENST00000603926:exon5:c.C2055A:p.A685A	NA	NA	2q35	NA	NA	NA	NA	rs1043537	0.17	0.17	0.156	0.170927	0.2425	0.1151	0.2003	0.0439	0.3057	0.24	0.13	0.23	0.05	0.2267	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.030705	NA	NA	0.251131	0.081277	NA	0.174	NA	4.9463356
1157	1	54440729	54440729	T	C	intergenic	LRRC42,LDLRAD1	dist=6888;dist=32242	NA	NA	ncRNA_exonic	ENSG00000219102	NA	NA	NA	Score=680;Name=lod=772	NA	1p32.3	NA	NA	NA	NA	rs72902501	0.18	0.18	0.198	0.203075	0.0537	0.0565	0.0634	0.6172	0.047	0.05	0.06	0.07	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.399501	NA	NA	NA	NA	NA	0.225	NA	4.9463
1157	6	132211418	132211418	A	G	intronic	ENPP1	NA	NA	NA	intronic	ENSG00000197594	NA	NA	NA	NA	NA	6q23.2	NA	NA	Name=10	NA	rs9493119	0.1	0.1	0.111	0.116414	0.0537	NA	0.0648	0.3434	0.0307	0.04	NA	0.06	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.332353	NA	NA	NA	NA	NA	0.08	NA	4.9463
1157	8	41583215	41583215	C	T	intronic	ANK1	NA	NA	NA	intronic	ENSG00000029534	NA	NA	NA	NA	NA	8p11.21	NA	NA	Name=3	NA	rs80058016	0.03	0.03	0.024	0.0229633	0.0537	0.001	0.0504	0.0129	0.0082	0.06	NA	0.04	0.02	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.049481	NA	NA	NA	NA	NA	0.109	NA	4.9463
1157	15	40268544	40268544	G	A	intronic	EIF2AK4	NA	NA	NA	intronic	ENSG00000128829	NA	NA	NA	NA	NA	15q15.1	NA	NA	Name=107	NA	rs12441486	0.12	0.12	0.081	0.134585	0.0537	0.1994	0.2752	0.0537	0.1605	0.05	0.21	0.2	0.05	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.067979	NA	NA	NA	NA	NA	0.08	NA	4.9463
1157	15	42445679	42445679	T	A	intronic	PLA2G4F	NA	NA	NA	intronic	ENSG00000168907	NA	NA	NA	NA	NA	15q15.1	Score=806;Name=V$OCT_C	NA	NA	NA	rs681029	0.23	0.23	0.197	0.278355	0.0537	0.1974	0.4193	0.4947	0.2004	0.04	0.18	0.36	0.48	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.762822	NA	NA	NA	NA	NA	0.232	NA	4.9463
1157	16	26043776	26043776	C	T	intronic	HS3ST4	NA	NA	NA	intronic	ENSG00000182601	NA	NA	NA	Score=685;Name=lod=814	NA	16p12.1	NA	NA	NA	NA	rs56334882	0.21	0.21	0.172	0.216254	0.0537	0.2897	0.1023	0.4539	0.0675	0.05	0.29	0.12	0.45	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.503377	2.503377	NA	NA	NA	NA	0.08	NA	4.9463
1157	4	88584160	88584160	G	A	exonic	DMP1	NA	synonymous SNV	DMP1:NM_001079911:exon5:c.G1182A:p.E394E,DMP1:NM_004407:exon6:c.G1230A:p.E410E	exonic	ENSG00000152592	NA	synonymous SNV	ENSG00000152592:ENST00000282479:exon5:c.G1182A:p.E394E,ENSG00000152592:ENST00000339673:exon6:c.G1230A:p.E410E	NA	NA	4q22.1	NA	NA	NA	NA	rs2615497	0.28	0.28	0.293	0.321286	0.2366	0.2589	0.2061	0.4652	0.3599	0.24	0.26	0.2	0.44	0.2594	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.406457	NA	NA	0.224419	0.39764	NA	0.268	NA	4.9462476
1157	12	94645255	94645255	A	G	exonic	PLXNC1	NA	synonymous SNV	PLXNC1:NM_005761:exon15:c.A2832G:p.T944T	exonic	ENSG00000136040	NA	synonymous SNV	ENSG00000136040:ENST00000258526:exon15:c.A2832G:p.T944T	NA	NA	12q22	Score=851;Name=V$USF_01	NA	NA	NA	rs2230757	0.62	0.62	0.569	0.608626	0.5706	0.7411	0.6974	0.5439	0.5358	0.57	0.75	0.68	0.49	0.5977	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.026789	NA	NA	0.552326	0.576033	NA	0.471	NA	4.9460406
1157	6	138413269	138413269	A	G	exonic	PERP	NA	synonymous SNV	PERP:NM_022121:exon3:c.T492C:p.I164I	exonic	ENSG00000112378	NA	synonymous SNV	ENSG00000112378:ENST00000421351:exon3:c.T492C:p.I164I	NA	NA	6q23.3	Score=926;Name=V$NFY_Q6	NA	NA	NA	rs648396	0.58	0.58	0.563	0.632188	0.5775	0.7232	0.5288	0.5545	0.773	0.57	0.67	0.54	0.53	0.5907	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.278146	NA	NA	0.552558	0.531548	NA	0.572	NA	4.9459086
1157	1	1636044	1636044	G	A	exonic	CDK11A	NA	synonymous SNV	CDK11A:NM_024011:exon14:c.C1509T:p.Y503Y,CDK11A:NM_033529:exon14:c.C1479T:p.Y493Y	exonic	ENSG00000008128	NA	synonymous SNV	ENSG00000008128:ENST00000356200:exon13:c.C1407T:p.Y469Y,ENSG00000008128:ENST00000357760:exon14:c.C1506T:p.Y502Y,ENSG00000008128:ENST00000358779:exon14:c.C1479T:p.Y493Y,ENSG00000008128:ENST00000378633:exon14:c.C1518T:p.Y506Y,ENSG00000008128:ENST00000378638:exon14:c.C1407T:p.Y469Y,ENSG00000008128:ENST00000404249:exon14:c.C1509T:p.Y503Y	Score=630;Name=lod=485	NA	1p36.33	NA	NA	NA	NA	rs1059822	0.5	0.5	0.432	0.647963	0.5924	0.4643	0.562	0.9433	0.5562	0.47	0.33	0.47	0.76	0.5644	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.758666	NA	NA	0.564434	0.879693	ID=COSM146375;OCCURENCE=1(stomach)	0.645	NA	4.9454326
1157	14	95107973	95107973	C	T	ncRNA_exonic	SERPINA13P	NA	NA	NA	ncRNA_exonic	ENSG00000187483	NA	NA	NA	Score=333;Name=lod=30	NA	14q32.13	NA	NA	NA	NA	rs4905226	0.17	0.17	0.154	0.171725	0.2505	0.1528	0.1124	0.0908	0.2618	0.25	0.14	0.13	0.1	0.2251	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.510039	NA	0.01	0.245755	0.123014	NA	0.109	NA	4.9453116
1157	6	29895958	29895958	C	A	intergenic	HCG4B,HLA-A	dist=2530;dist=14289	NA	NA	ncRNA_exonic	ENSG00000230795	NA	NA	NA	Score=272;Name=lod=17	NA	6p22.1	NA	NA	NA	NA	rs9259841	0.05	0.05	0.06	0.053115	0.0547	0.0506	0.0346	0.0567	0.0624	0.05	0.06	0.04	0.05	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.701506	NA	NA	NA	NA	NA	0.014	NA	4.9453
1157	7	6969385	6969385	G	A	intergenic	CCZ1B,LOC100131257	dist=103459;dist=146016	NA	NA	ncRNA_intronic	ENSG00000226943	NA	NA	NA	Score=251;Name=lod=14	NA	7p22.1	NA	NA	NA	NA	rs139679358	0.04	0.04	0.017	0.0323482	0.0547	NA	0.1225	0.0038	0.0174	0.06	NA	0.11	0.01	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.607143	NA	NA	NA	NA	NA	0.022	NA	4.9453
1157	4	5732978	5732978	G	A	intronic	EVC	NA	NA	NA	intronic	ENSG00000072840	NA	NA	NA	NA	NA	4p16.2	NA	NA	Name=5	NA	rs1871587	0.08	0.08	0.078	0.101837	0.0547	0.0804	0.0749	0.1581	0.1155	0.05	0.08	0.06	0.16	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.181455	NA	NA	NA	NA	NA	0.072	NA	4.9453
1157	4	20523733	20523733	C	T	intronic	SLIT2	NA	NA	NA	intronic	ENSG00000145147	NA	NA	NA	Score=558;Name=lod=247	NA	4p15.31	NA	NA	NA	NA	rs73252462	0.03	0.03	0.028	0.0191693	0.0547	NA	0.0432	0.0015	0.0092	0.07	NA	0.06	0.002	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.871546	NA	NA	NA	NA	NA	0.022	NA	4.9453
1157	10	60577256	60577256	C	T	intronic	BICC1	NA	NA	NA	intronic	ENSG00000122870	NA	NA	NA	Score=340;Name=lod=32	NA	10q21.1	NA	NA	NA	NA	rs41305703	0.03	0.03	0.017	0.0195687	0.0547	NA	0.0476	0.0045	0.0041	0.05	NA	0.06	0.0041	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.041877	3.041877	NA	NA	NA	NA	0.014	NA	4.9453
1157	21	19713821	19713821	C	T	exonic	TMPRSS15	NA	synonymous SNV	TMPRSS15:NM_002772:exon13:c.G1473A:p.A491A	exonic	ENSG00000154646	NA	synonymous SNV	ENSG00000154646:ENST00000284885:exon13:c.G1473A:p.A491A	NA	NA	21q21.1	NA	NA	NA	NA	rs2824751	0.17	0.17	0.16	0.183706	0.2505	0.1101	0.1499	0.1551	0.2536	0.23	0.12	0.16	0.15	0.2232	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.114435	NA	NA	0.247907	0.16364	NA	0.174	NA	4.9450596
1158	22	37603744	37603744	C	T	exonic	SSTR3	NA	synonymous SNV	SSTR3:NM_001051:exon2:c.G99A:p.A33A	exonic	ENSG00000183473	NA	synonymous SNV	ENSG00000183473:ENST00000328544:exon2:c.G99A:p.A33A,ENSG00000183473:ENST00000402501:exon2:c.G99A:p.A33A	NA	NA	22q13.1	NA	NA	NA	NA	rs86583	0.42	0.42	0.405	0.407947	0.2247	0.5863	0.3343	0.5461	0.2781	0.23	0.63	0.33	0.52	0.2903	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.257406	NA	NA	0.20686	0.484559	NA	0.312	NA	4.9448066
1158	7	37936530	37936530	T	C	exonic	NME8	NA	synonymous SNV	NME8:NM_016616:exon17:c.T1603C:p.L535L	exonic	ENSG00000086288	NA	synonymous SNV	ENSG00000086288:ENST00000440017:exon16:c.T1603C:p.L535L,ENSG00000086288:ENST00000199447:exon17:c.T1603C:p.L535L	NA	NA	7p14.1	NA	NA	NA	NA	rs3213975	0.23	0.23	0.228	0.20647	0.2396	0.2292	0.2017	0.1672	0.2055	0.25	0.23	0.22	0.19	0.241	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.940681	NA	NA	0.241512	0.205856	NA	0.145	NA	4.9445546
1158	19	43383775	43383775	T	G	UTR5	PSG1	NM_001184826:c.-42A>C,NM_001184825:c.-42A>C,NM_006905:c.-42A>C	NA	NA	UTR5	ENSG00000231924	ENST00000436291:c.-42A>C,ENST00000595124:c.-42A>C,ENST00000595356:c.-42A>C,ENST00000403380:c.-42A>C,ENST00000312439:c.-42A>C,ENST00000244296:c.-42A>C	NA	NA	NA	NA	19q13.2	NA	NA	Name=3	NA	rs12461039	0.2	0.2	0.169	0.251398	0.1014	0.4187	0.1787	0.1899	0.3681	0.1	0.4	0.12	0.17	0.1826	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.189547	NA	NA	0.104913	0.166998	NA	0.196	NA	4.9444204
1158	9	140711882	140711882	A	C	intronic	EHMT1	NA	NA	NA	intronic	ENSG00000181090	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs73578877	0.13	0.13	0.144	0.167532	0.004	NA	0.0476	0.6067	NA	NA	NA	0.03	0.56	0.0477	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.97543	NA	NA	0.003953	0.48956	NA	0.152	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000082231.3;CLNDSDB=.;CLNDSDBID=.	4.944347
1158	6	29901917	29901917	A	G	intergenic	HCG4B,HLA-A	dist=8489;dist=8330	NA	NA	ncRNA_exonic	ENSG00000228078	NA	NA	NA	Score=389;Name=lod=51	NA	6p22.1	NA	NA	NA	NA	rs9259920	0.06	0.06	0.053	0.0529153	0.0557	0.0506	0.0346	0.056	0.0613	0.05	0.08	0.05	0.05	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.783619	NA	NA	NA	NA	NA	NA	NA	4.9443
1158	19	51261892	51261892	G	A	intergenic	CLEC11A,GPR32	dist=32911;dist=11829	NA	NA	ncRNA_exonic	ENSG00000269565	NA	NA	NA	Score=548;Name=lod=226	NA	19q13.33	NA	NA	NA	NA	rs73046518	0.03	0.03	0.03	0.0327476	0.0557	0.004	0.0519	0.0121	0.0532	0.06	NA	0.05	0.01	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.326798	NA	0.01	NA	NA	NA	0.029	NA	4.9443
1158	21	33975696	33975696	T	G	intronic	C21orf59	NA	NA	NA	intronic	ENSG00000159079,ENSG00000265590	NA	NA	NA	NA	NA	21q22.11	NA	NA	Name=2	NA	rs844995	0.04	0.04	0.036	0.0411342	0.0557	0.002	0.0303	0.0545	0.0562	0.05	0.0035	0.04	0.07	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.674916	NA	NA	NA	NA	NA	0.08	NA	4.9443
1158	3	31774704	31774704	G	A	intronic	OSBPL10	NA	NA	NA	intronic	ENSG00000144645	NA	NA	NA	NA	NA	3p23	NA	NA	Name=39	NA	rs79996076	0.02	0.02	0.01	0.0221645	0.0169	0.0377	0.0086	0.0015	0.0491	0.02	0.03	0.01	NA	0.0222	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.154725	3.154725	NA	0.016744	0.003177	NA	NA	NA	4.944156
1158	5	179048449	179048449	T	G	intronic	HNRNPH1	NA	NA	NA	UTR5	ENSG00000169045	ENST00000521790:c.-185A>C	NA	NA	Score=376;Name=lod=45	NA	5q35.3	NA	NA	Name=57	NA	rs4535419	0.33	0.33	0.331	0.28135	0.4304	0.1706	0.3112	0.3109	0.181	0.44	0.17	0.35	0.34	0.3535	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.801019	1.801019	NA	0.438664	0.350136	NA	0.42	NA	4.9441027
1158	13	25367301	25367301	C	T	exonic	RNF17	NA	synonymous SNV	RNF17:NM_001184993:exon10:c.C1057T:p.L353L,RNF17:NM_031277:exon10:c.C1057T:p.L353L	exonic	ENSG00000132972	NA	synonymous SNV	ENSG00000132972:ENST00000255324:exon10:c.C1057T:p.L353L,ENSG00000132972:ENST00000255325:exon10:c.C1060T:p.L354L,ENSG00000132972:ENST00000381921:exon10:c.C1057T:p.L353L	NA	NA	13q12.12	NA	NA	NA	NA	rs1158061	0.26	0.26	0.235	0.250599	0.2097	0.3542	0.3228	0.1074	0.3282	0.22	0.39	0.32	0.11	0.2683	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.921013	NA	NA	0.244884	0.108034	NA	0.21	NA	4.9437826
1158	2	73677833	73677833	A	G	exonic	ALMS1	NA	synonymous SNV	ALMS1:NM_015120:exon8:c.A4176G:p.Q1392Q	exonic	ENSG00000116127	NA	synonymous SNV	ENSG00000116127:ENST00000409009:exon7:c.A4050G:p.Q1350Q,ENSG00000116127:ENST00000264448:exon8:c.A4176G:p.Q1392Q,ENSG00000116127:ENST00000377715:exon8:c.A4176G:p.Q1392Q	NA	NA	2p13.1	NA	NA	NA	NA	rs6546836	0.32	0.32	0.338	0.338259	0.2256	0.0089	0.3847	0.7859	0.1554	0.23	0.01	0.34	0.79	0.2609	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.199412	NA	NA	0.236426	0.670692	ID=COSM1409404;OCCURENCE=1(large_intestine)	0.406	NA	4.9437406
1158	9	101829135	101829135	A	T	intronic	COL15A1	NA	NA	NA	intronic	ENSG00000204291	NA	NA	NA	NA	NA	9q22.33	NA	NA	Name=10	NA	rs116994320	0.01	0.01	0.006	0.00519169	0.0189	NA	0.0072	NA	0.002	0.03	NA	0.01	NA	0.0162	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.000674	NA	NA	0.021163	0.003177	NA	0.007	NA	4.943737
1158	1	9307138	9307138	T	C	exonic	H6PD	NA	synonymous SNV	H6PD:NM_004285:exon3:c.T741C:p.A247A	exonic	ENSG00000049239	NA	synonymous SNV	ENSG00000049239:ENST00000377403:exon3:c.T741C:p.A247A,ENSG00000049239:ENST00000602477:exon3:c.T774C:p.A258A	NA	NA	1p36.22	NA	NA	NA	NA	rs11121350	0.3	0.3	0.292	0.275759	0.2445	0.4196	0.281	0.2867	0.1411	0.24	0.45	0.23	0.27	0.239	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.534899	NA	NA	0.239535	0.302996	NA	0.261	NA	4.9436316
1158	9	139371405	139371405	G	C	exonic	SEC16A	NA	synonymous SNV	SEC16A:NM_001276418:exon2:c.C663G:p.G221G,SEC16A:NM_014866:exon3:c.C663G:p.G221G	exonic	ENSG00000148396	NA	synonymous SNV	ENSG00000148396:ENST00000290037:exon1:c.C129G:p.G43G,ENSG00000148396:ENST00000313050:exon1:c.C663G:p.G221G,ENSG00000148396:ENST00000371706:exon1:c.C129G:p.G43G,ENSG00000148396:ENST00000431893:exon1:c.C129G:p.G43G	NA	NA	9q34.3	NA	NA	NA	NA	rs11999532	0.16	0.16	0.141	0.135783	0.2535	0.0536	0.2565	0.0454	0.136	0.26	0.07	0.23	0.05	0.2098	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.40138	NA	NA	0.259754	0.077194	NA	0.13	NA	4.9436126
1158	19	57832257	57832257	T	C	intronic	ZNF543	NA	NA	NA	intronic	ENSG00000178229	NA	NA	NA	NA	NA	19q13.43	NA	Name=CTCF	Name=32	NA	rs4801462	0.34	0.34	0.291	0.326677	0.3241	0.4077	0.438	0.2171	0.3149	0.33	0.44	0.41	0.21	0.3673	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.096759	NA	NA	0.365	0.233772	NA	0.232	NA	4.9436
1158	1	209406337	209406337	A	G	intergenic	PLXNA2,MIR205HG	dist=988672;dist=195831	NA	NA	ncRNA_exonic	ENSG00000224540	NA	NA	NA	Score=707;Name=lod=999	NA	1q32.2	NA	NA	NA	NA	rs73085926	0.1	0.1	0.102	0.123403	0.0567	0.0218	0.0562	0.3011	0.1043	0.06	0.01	0.07	0.28	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.855513	NA	NA	NA	NA	NA	0.123	NA	4.9433
1158	14	107022266	107022266	A	G	intergenic	LINC00221,NONE	dist=70737;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000253241	NA	NA	NA	Score=469;Name=lod=107	NA	14q32.33	NA	NA	NA	NA	rs4773999	0.11	0.11	0.105	0.159545	0.0567	0.1567	0.1455	0.1694	0.2648	0.06	0.15	0.1	0.16	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.570575	NA	NA	NA	NA	NA	0.174	NA	4.9433
1158	16	1261086	1261086	C	A	intronic	CACNA1H	NA	NA	NA	intronic	ENSG00000196557	NA	NA	NA	NA	NA	16p13.3	NA	Name=Pol2	NA	NA	rs72552038	0.03	0.03	0.024	0.0335463	0.0567	NA	0.0317	NA	0.091	0.06	NA	0.03	NA	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.219531	NA	NA	NA	NA	NA	0.029	NA	4.9433
1158	1	236645670	236645670	C	T	exonic	EDARADD	NA	synonymous SNV	EDARADD:NM_080738:exon6:c.C339T:p.D113D,EDARADD:NM_145861:exon6:c.C369T:p.D123D	exonic	ENSG00000186197	NA	synonymous SNV	ENSG00000186197:ENST00000334232:exon6:c.C369T:p.D123D,ENSG00000186197:ENST00000359362:exon6:c.C339T:p.D113D	NA	NA	1q43	NA	NA	NA	NA	rs604070	0.14	0.14	0.138	0.133187	0.2753	0.1062	0.1095	0.0545	0.138	0.26	0.09	0.12	0.05	0.2024	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.167057	NA	NA	0.245698	0.080345	NA	0.087	NA	4.9432686
1158	1	111966291	111966291	C	T	exonic	OVGP1	NA	synonymous SNV	OVGP1:NM_002557:exon5:c.G357A:p.K119K	exonic	ENSG00000085465	NA	synonymous SNV	ENSG00000085465:ENST00000540696:exon4:c.G177A:p.K59K,ENSG00000085465:ENST00000369732:exon5:c.G357A:p.K119K	NA	NA	1p13.2	NA	NA	NA	NA	rs954739	0.15	0.15	0.149	0.15016	0.2366	0.1389	0.1282	0.0598	0.2106	0.23	0.13	0.16	0.06	0.2227	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.155597	NA	NA	0.264419	0.088516	NA	0.174	NA	4.9429476
1158	8	131165086	131165086	A	T	intronic	ASAP1	NA	NA	NA	intronic	ENSG00000153317	NA	NA	NA	NA	NA	8q24.21	NA	Name=p300	Name=6	NA	rs3935174	0.42	0.42	0.412	0.435503	0.3419	0.6637	0.3401	0.3011	0.546	0.34	0.67	0.35	0.32	0.3787	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.876069	NA	NA	0.336512	0.317295	ID=COSN168430;OCCURENCE=1(large_intestine)	0.341	NA	4.942888
1158	14	106866565	106866565	C	A	intergenic	LINC00226,LINC00221	dist=121599;dist=71890	NA	NA	exonic	ENSG00000211958	NA	synonymous SNV	ENSG00000211958:ENST00000390618:exon2:c.G189T:p.G63G	Score=481;Name=lod=120	NA	14q32.33	NA	NA	NA	NA	rs58308167	0.33	0.33	0.314	0.229034	0.1054	0.2867	0.1643	0.3381	0.1953	0.18	0.4	0.27	0.51	0.2703	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.448927	NA	NA	0.181414	0.445797	NA	0.246	NA	4.942886
1158	1	19415304	19415304	C	T	exonic	UBR4	NA	synonymous SNV	UBR4:NM_020765:exon98:c.G14379A:p.K4793K	exonic	ENSG00000127481	NA	synonymous SNV	ENSG00000127481:ENST00000429347:exon8:c.G948A:p.K316K,ENSG00000127481:ENST00000543981:exon10:c.G1371A:p.K457K,ENSG00000127481:ENST00000375224:exon13:c.G1500A:p.K500K,ENSG00000127481:ENST00000375217:exon98:c.G14358A:p.K4786K,ENSG00000127481:ENST00000375226:exon98:c.G14307A:p.K4769K,ENSG00000127481:ENST00000375254:exon98:c.G14379A:p.K4793K,ENSG00000127481:ENST00000375267:exon98:c.G14379A:p.K4793K	Score=525;Name=lod=182	NA	1p36.13	NA	NA	NA	NA	rs1043899	0.63	0.63	0.597	0.591853	0.5775	0.7589	0.6787	0.5091	0.4847	0.57	0.78	0.65	0.52	0.5807	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.000913	NA	NA	0.565698	0.527009	NA	0.645	NA	4.9427686
1158	5	168189724	168189724	G	A	intronic	SLIT3	NA	NA	NA	intronic	ENSG00000184347	NA	NA	NA	NA	NA	5q34	NA	NA	Name=3	NA	rs41283179	0.01	0.01	0.006	0.00539137	0.0169	NA	0.0115	0.0015	NA	0.02	NA	0.01	0.002	0.0164	0.024	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.334502	2.334502	NA	0.023953	0.002724	NA	0.007	NA	4.942747
1158	1	19549759	19549759	G	A	intronic	EMC1	NA	NA	NA	ncRNA_intronic	ENSG00000230424	NA	NA	NA	NA	NA	1p36.13	NA	Name=HDAC2_(SC-6296),CEBPB,c-Jun,p300,SP1,HNF4G_(SC-6558),JunD	NA	NA	rs710870	0.5	0.5	0.507	0.502796	0.3907	0.7222	0.3804	0.5144	0.4632	0.4	0.73	0.35	0.5	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.692011	NA	NA	NA	NA	NA	0.522	NA	4.9426333
1158	19	19369435	19369435	A	G	exonic	HAPLN4	NA	synonymous SNV	HAPLN4:NM_023002:exon4:c.T714C:p.S238S	exonic	ENSG00000187664	NA	synonymous SNV	ENSG00000187664:ENST00000291481:exon4:c.T714C:p.S238S	NA	NA	19p13.11	NA	NA	NA	NA	rs2074295	0.3	0.3	0.277	0.353035	0.2117	0.2589	0.3213	0.4675	0.4632	0.2	0.27	0.3	0.48	0.2867	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.752399	NA	NA	0.225803	0.426918	ID=COSM330370;OCCURENCE=2(breast),1(haematopoietic_and_lymphoid_tissue)	0.341	NA	4.9424636
1158	15	84581889	84581889	G	A	exonic	ADAMTSL3	NA	synonymous SNV	ADAMTSL3:NM_207517:exon16:c.G1746A:p.P582P	exonic	ENSG00000156218	NA	synonymous SNV	ENSG00000156218:ENST00000286744:exon16:c.G1746A:p.P582P,ENSG00000156218:ENST00000567476:exon16:c.G1746A:p.P582P	NA	NA	15q25.2	NA	NA	NA	NA	rs12439867	0.34	0.34	0.284	0.386382	0.2117	0.3294	0.4914	0.4871	0.4141	0.2	0.33	0.43	0.49	0.3019	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.640096	NA	NA	0.210698	0.439855	NA	0.333	NA	4.9423686
1158	6	3978888	3978888	G	A	intergenic	FAM50B,PRPF4B	dist=127337;dist=42681	NA	NA	ncRNA_exonic	ENSG00000216657	NA	NA	NA	NA	NA	6p25.2	NA	Name=eGFP-GATA2,GATA2_(CG2-96),CTCF,c-Fos	NA	NA	rs76950182	0.02	0.02	0.023	0.0169728	0.0577	NA	0.013	0.0045	0.0123	0.06	NA	0.01	0.01	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.581674	NA	NA	NA	NA	NA	NA	NA	4.9423
1158	6	30881021	30881021	A	G	intronic	GTF2H4	NA	NA	NA	intronic	ENSG00000213780	NA	NA	NA	NA	NA	6p21.33	NA	Name=TAF7_(SQ-8),Pol2	NA	NA	rs3218824	0.05	0.05	0.039	0.0341454	0.0577	0.003	0.0375	0.056	0.0102	0.06	0.01	0.04	0.08	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.178861	NA	NA	NA	NA	NA	0.007	NA	4.9423
1158	8	30189777	30189777	T	C	intergenic	MIR548O2,LOC100128750	dist=81564;dist=49858	NA	NA	ncRNA_exonic	ENSG00000253346	NA	NA	NA	Score=705;Name=lod=978	NA	8p12	NA	NA	NA	NA	rs17619523	0.03	0.03	0.016	0.0313498	0.0577	NA	0.072	0.0008	0.0491	0.06	NA	0.05	0.0041	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.609057	NA	NA	NA	NA	NA	0.08	NA	4.9423
1158	8	30210416	30210416	G	A	intergenic	MIR548O2,LOC100128750	dist=102203;dist=29219	NA	NA	ncRNA_exonic	ENSG00000127589	NA	NA	NA	Score=874;Name=lod=4749	NA	8p12	NA	NA	NA	NA	rs117064690	0.03	0.03	0.015	0.033746	0.0577	NA	0.0764	0.0076	0.0491	0.06	NA	0.06	0.01	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.209337	NA	NA	NA	NA	NA	0.072	NA	4.9423
1158	10	102051244	102051244	G	T	intronic	PKD2L1	NA	NA	NA	intronic	ENSG00000107593	NA	NA	NA	NA	NA	10q24.31	NA	NA	Name=9	NA	rs35423189	0.07	0.07	0.071	0.0826677	0.0577	0.0605	0.0591	0.121	0.0961	0.06	0.07	0.07	0.1	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.26629	NA	NA	NA	NA	NA	0.051	NA	4.9423
1158	5	150406437	150406437	A	G	intronic	GPX3	NA	NA	NA	intronic	ENSG00000211445	NA	NA	NA	NA	NA	5q33.1	NA	NA	Name=31	NA	rs869976	0.08	0.08	0.097	0.106629	0.007	0.0357	0.0375	0.27	0.1104	0.004	0.04	0.06	0.26	0.0422	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.346308	NA	NA	0.008513	0.215653	NA	0.109	NA	4.942287
1158	6	30890569	30890569	G	T	intronic	VARS2	NA	NA	NA	intronic	ENSG00000137411	NA	NA	NA	NA	NA	6p21.33	NA	Name=JunD	Name=15	NA	rs753726	0.24	0.24	0.258	0.222045	0.3559	0.247	0.2075	0.0983	0.2362	0.35	0.28	0.2	0.06	0.3249	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.642433	NA	NA	0.377031	0.145557	NA	0.283	NA	4.942169
1158	14	23777099	23777099	G	A	exonic	BCL2L2,BCL2L2-PABPN1	NA	synonymous SNV	BCL2L2:NM_001199839:exon3:c.G123A:p.P41P,BCL2L2-PABPN1:NM_001199864:exon3:c.G123A:p.P41P,BCL2L2:NM_004050:exon3:c.G123A:p.P41P	exonic	ENSG00000129473,ENSG00000258643	NA	synonymous SNV	ENSG00000129473:ENST00000554635:exon2:c.G123A:p.P41P,ENSG00000258643:ENST00000557008:exon2:c.G123A:p.P41P,ENSG00000129473:ENST00000250405:exon3:c.G123A:p.P41P,ENSG00000258643:ENST00000553781:exon3:c.G123A:p.P41P,ENSG00000258643:ENST00000556100:exon3:c.G123A:p.P41P,ENSG00000129473:ENST00000557236:exon3:c.G123A:p.P41P,ENSG00000129473:ENST00000557579:exon3:c.G123A:p.P41P,ENSG00000129473:ENST00000553824:exon4:c.G123A:p.P41P	NA	NA	14q11.2	NA	NA	NA	NA	rs2231301	0.29	0.29	0.282	0.249002	0.2336	0.4752	0.3069	0.0454	0.2658	0.25	0.52	0.31	0.06	0.2611	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.538092	NA	NA	0.229821	0.078983	NA	0.254	NA	4.9421456
1158	4	82369205	82369205	T	A	intronic	RASGEF1B	NA	NA	NA	intronic	ENSG00000138670	NA	NA	NA	NA	NA	4q21.21	NA	Name=FOSL1_(SC-183)	Name=7	NA	rs1077803	0.41	0.41	0.439	0.453674	0.341	0.2252	0.2421	0.8661	0.3978	0.35	0.2	0.26	0.87	0.3688	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.095031	NA	NA	0.34814	0.783477	ID=COSN167259;OCCURENCE=1(large_intestine)	0.478	NA	4.94206
1158	6	90529343	90529343	C	T	UTR5	MDN1	NM_014611:c.-17G>A	NA	NA	UTR5	ENSG00000112159	ENST00000369393:c.-17G>A,ENST00000428876:c.-17G>A,ENST00000439638:c.-17G>A	NA	NA	NA	NA	6q15	NA	Name=HEY1,Sin3Ak-20,Pol2-4H8,Pol2,HMGN3,TAF1	NA	NA	rs28372875	0.07	0.07	0.061	0.08127	0.1481	0.0437	0.0908	0.0061	0.1462	0.13	0.03	0.09	0.01	0.1105	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.365547	1.365547	NA	0.132674	0.027236	NA	0.13	NA	4.9420594
1158	6	32800224	32800224	C	A	exonic	TAP2	NA	synonymous SNV	TAP2:NM_018833:exon7:c.G1158T:p.G386G	exonic	ENSG00000204267,ENSG00000250264	NA	synonymous SNV	ENSG00000204267:ENST00000374897:exon7:c.G1158T:p.G386G,ENSG00000204267:ENST00000374899:exon7:c.G1158T:p.G386G,ENSG00000250264:ENST00000452392:exon7:c.G1158T:p.G386G	NA	NA	6p21.32	NA	NA	NA	NA	rs2228397	0.25	0.25	0.218	0.244209	0.2227	0.248	0.3112	0.1967	0.2791	0.22	0.27	0.27	0.24	0.2546	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.684168	NA	NA	0.247693	0.23393	NA	0.181	NA	4.9416736
1158	2	89309542	89309542	T	G	intergenic	MIR4436A,NONE	dist=197574;dist=NONE	NA	NA	exonic	ENSG00000241755	NA	synonymous SNV	ENSG00000241755:ENST00000493819:exon2:c.A288C:p.T96T	Score=472;Name=lod=110	NA	2p11.2	NA	NA	NA	NA	rs150068501	0.22	0.22	0.119	0.266374	0.163	0.4048	0.2767	0.1884	0.3282	0.13	0.38	0.22	0.16	0.2228	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.09322	NA	NA	0.172718	0.174457	ID=COSN166175;OCCURENCE=1(breast)	0.101	NA	4.941482
1158	2	152670892	152670892	T	C	intronic	ARL5A	NA	NA	NA	intronic	ENSG00000162980	NA	NA	NA	Score=243;Name=lod=13	NA	2q23.3	NA	NA	NA	NA	rs72866498	0.02	0.02	0.019	0.0181709	0.0586	NA	0.0317	0.003	0.0061	0.05	NA	0.04	0.002	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.002615	2.002615	NA	NA	NA	NA	0.051	NA	4.9414
1158	5	169081315	169081315	A	C	intronic	DOCK2	NA	NA	NA	intronic	ENSG00000134516	NA	NA	NA	NA	NA	5q35.1	NA	NA	Name=4	NA	rs12656935	0.06	0.06	0.057	0.0792732	0.0586	0.1042	0.0447	0.0318	0.1636	0.07	0.1	0.06	0.03	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.394135	NA	NA	NA	NA	NA	0.065	NA	4.9414
1158	22	35778961	35778961	A	C	intronic	HMOX1	NA	NA	NA	intronic	ENSG00000100292	NA	NA	NA	NA	NA	22q12.3	NA	NA	Name=6	NA	rs5995097	0.05	0.05	0.042	0.0357428	0.0586	0.0506	0.0216	0.0287	0.0164	0.06	0.05	0.02	0.04	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.390973	NA	NA	NA	NA	NA	0.036	NA	4.9414
1158	19	46973981	46973981	G	A	exonic	PNMAL1	NA	synonymous SNV	PNMAL1:NM_001103149:exon2:c.C312T:p.A104A,PNMAL1:NM_018215:exon2:c.C312T:p.A104A	exonic	ENSG00000182013	NA	synonymous SNV	ENSG00000182013:ENST00000313683:exon2:c.C312T:p.A104A,ENSG00000182013:ENST00000438932:exon2:c.C312T:p.A104A	NA	NA	19q13.32	NA	NA	NA	NA	rs4803960	0.24	0.24	0.244	0.236222	0.2485	0.1796	0.2089	0.3313	0.1728	0.25	0.15	0.26	0.33	0.232	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.523375	1.523375	NA	0.244884	0.348616	NA	0.312	NA	4.9412826
1158	12	11214360	11214360	C	T	exonic	TAS2R46	NA	synonymous SNV	TAS2R46:NM_176887:exon1:c.G534A:p.T178T	exonic	ENSG00000226761	NA	synonymous SNV	ENSG00000226761:ENST00000533467:exon1:c.G534A:p.T178T	NA	NA	12p13.2	NA	NA	NA	NA	rs73260771	0.17	0.17	0.146	0.124002	0.2773	NA	0.2248	0.1029	0.0511	0.28	NA	0.22	0.14	0.1879	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.716997	NA	NA	0.260354	0.134711	NA	0.094	NA	4.9411126
1158	14	106926287	106926287	G	A	intergenic	LINC00226,LINC00221	dist=181321;dist=12168	NA	NA	exonic	ENSG00000232216	NA	synonymous SNV	ENSG00000232216:ENST00000434710:exon2:c.C255T:p.G85G	Score=436;Name=lod=79	NA	14q32.33	NA	NA	NA	NA	rs2467911	0.28	0.28	0.258	NA	NA	NA	NA	NA	NA	0.28	0.17	0.22	0.43	0.2919	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.155743	NA	NA	0.267461	0.408978	NA	0.283	NA	4.940639
1158	11	59210761	59210761	C	G	exonic	OR5A1	NA	synonymous SNV	OR5A1:NM_001004728:exon1:c.C120G:p.T40T	exonic	ENSG00000172320	NA	synonymous SNV	ENSG00000172320:ENST00000302030:exon1:c.C120G:p.T40T	NA	NA	11q12.1	NA	NA	NA	NA	rs11605572	0.16	0.16	0.145	0.128195	0.2525	0.1111	0.1326	0.0333	0.1431	0.27	0.12	0.16	0.05	0.2101	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.574326	NA	NA	0.263562	0.065198	NA	0.116	NA	4.9405046
1158	1	118624336	118624336	T	C	intronic	SPAG17	NA	NA	NA	intronic	ENSG00000155761	NA	NA	NA	NA	NA	1p12	NA	Name=p300,c-Myc	NA	NA	rs12043257	0.12	0.12	0.116	0.135184	0.0596	0.2877	0.0447	0.0862	0.1861	0.06	0.24	0.04	0.11	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.542229	NA	NA	NA	NA	NA	0.043	NA	4.9404
1158	2	174350958	174350958	C	T	intergenic	CDCA7,SP3	dist=117240;dist=420229	NA	NA	ncRNA_exonic	ENSG00000226131	NA	NA	NA	Score=516;Name=lod=167	NA	2q31.1	NA	NA	NA	NA	rs10497392	0.13	0.13	0.13	0.140375	0.0596	0.0357	0.0836	0.3661	0.0665	0.06	0.03	0.11	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.153803	NA	NA	NA	NA	NA	0.116	NA	4.9404
1158	3	149182086	149182086	A	T	intergenic	TM4SF1,TM4SF4	dist=86518;dist=10282	NA	NA	ncRNA_exonic	ENSG00000241929	NA	NA	NA	Score=528;Name=lod=187	NA	3q25.1	NA	NA	NA	NA	rs60028604	0.05	0.05	NA	0.0443291	0.0596	0.0675	0.0576	0.0121	0.0389	0.07	0.08	0.03	0.01	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.851528	1.851528	NA	NA	NA	NA	NA	NA	4.9404
1158	6	29925281	29925281	C	G	intergenic	HLA-A,HCG9	dist=11620;dist=17611	NA	NA	ncRNA_exonic	ENSG00000235290	NA	NA	NA	Score=441;Name=lod=83	NA	6p22.1	NA	NA	NA	NA	rs117485380	0.08	0.08	0.049	0.0940495	0.0596	0.2321	0.0403	0.0008	0.1513	0.06	0.2	0.04	0.002	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.466306	2.466306	NA	NA	NA	NA	0.094	NA	4.9404
1158	12	55916900	55916900	T	G	intergenic	OR6C68,OR6C4	dist=29800;dist=28111	NA	NA	ncRNA_exonic	ENSG00000234670	NA	NA	NA	Score=401;Name=lod=57	NA	12q13.2	NA	NA	NA	NA	rs4301049	0.09	0.09	0.103	0.0948482	0.0596	0.001	0.0447	0.267	0.0307	0.06	0.0017	0.05	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.642079	2.642079	NA	NA	NA	NA	0.21	NA	4.9404
1158	15	66672083	66672083	A	T	intergenic	TIPIN,MAP2K1	dist=23029;dist=7128	NA	NA	ncRNA_exonic	ENSG00000240821	NA	NA	NA	Score=702;Name=lod=951	NA	15q22.31	NA	NA	NA	NA	rs71398264	0.03	0.03	0.03	0.0195687	0.0596	0.001	0.0288	0.0061	0.0092	0.07	0.0017	0.04	0.01	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.423765	1.423765	NA	NA	NA	NA	0.072	NA	4.9404
1158	3	183685534	183685534	A	G	exonic	ABCC5	NA	synonymous SNV	ABCC5:NM_005688:exon12:c.T1782C:p.C594C	exonic	ENSG00000114770	NA	synonymous SNV	ENSG00000114770:ENST00000265586:exon11:c.T1782C:p.C594C,ENSG00000114770:ENST00000334444:exon12:c.T1782C:p.C594C	Score=620;Name=lod=443	NA	3q27.1	NA	NA	NA	NA	rs939336	0.69	0.69	0.702	0.691693	0.5746	0.8621	0.5951	0.7897	0.5726	0.56	0.86	0.57	0.75	0.587	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.110434	NA	NA	0.564692	0.765593	NA	0.696	NA	4.9403746
1158	1	19447843	19447843	C	G	exonic	UBR4	NA	synonymous SNV	UBR4:NM_020765:exon68:c.G9981C:p.L3327L	exonic	ENSG00000127481	NA	synonymous SNV	ENSG00000127481:ENST00000425413:exon21:c.G2805C:p.L935L,ENSG00000127481:ENST00000417040:exon41:c.G6039C:p.L2013L,ENSG00000127481:ENST00000375217:exon68:c.G9960C:p.L3320L,ENSG00000127481:ENST00000375226:exon68:c.G9909C:p.L3303L,ENSG00000127481:ENST00000375254:exon68:c.G9981C:p.L3327L,ENSG00000127481:ENST00000375267:exon68:c.G9981C:p.L3327L	Score=534;Name=lod=197	NA	1p36.13	NA	NA	NA	NA	rs1044010	0.64	0.64	0.607	0.600439	0.5775	0.7589	0.6844	0.5424	0.4796	0.56	0.78	0.66	0.58	0.5831	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.271202	NA	NA	0.565814	0.549024	ID=COSM1337405;OCCURENCE=1(large_intestine)	0.659	NA	4.9402526
1158	7	37951726	37951726	G	A	exonic	SFRP4	NA	synonymous SNV	SFRP4:NM_003014:exon4:c.C786T:p.R262R	exonic	ENSG00000106483	NA	synonymous SNV	ENSG00000106483:ENST00000436072:exon4:c.C786T:p.R262R,ENSG00000106483:ENST00000447200:exon5:c.C384T:p.R128R	Score=472;Name=lod=110	NA	7p14.1	NA	NA	NA	NA	rs1132553	0.5	0.5	0.509	0.439097	0.5825	0.3651	0.451	0.4501	0.3446	0.57	0.38	0.51	0.52	0.5331	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.981266	NA	NA	0.611163	0.477758	NA	0.493	NA	4.9399036
1158	7	82544987	82544987	A	G	exonic	PCLO	NA	synonymous SNV	PCLO:NM_014510:exon7:c.T12315C:p.H4105H,PCLO:NM_033026:exon7:c.T12315C:p.H4105H	exonic	ENSG00000186472	NA	synonymous SNV	ENSG00000186472:ENST00000437081:exon2:c.T2475C:p.H825H,ENSG00000186472:ENST00000333891:exon7:c.T12315C:p.H4105H,ENSG00000186472:ENST00000423517:exon7:c.T12315C:p.H4105H	NA	NA	7q21.11	NA	NA	NA	NA	rs17156844	0.41	0.41	0.407	0.426717	0.2028	0.5466	0.4986	0.5023	0.3804	0.2	0.56	0.46	0.5	0.3028	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.679213	NA	NA	0.221273	0.408488	NA	0.413	NA	4.9397936
1158	2	207422325	207422325	A	G	intronic	ADAM23	NA	NA	NA	intronic	ENSG00000114948	NA	NA	NA	NA	NA	2q33.3	NA	NA	Name=8	NA	rs72937523	0.03	0.03	0.03	0.034345	0.0606	0.002	0.0418	0.0068	0.0726	0.06	0.0017	0.06	0.01	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.614183	NA	NA	NA	NA	NA	0.072	NA	4.9394
1158	3	147309337	147309337	G	A	intergenic	ZIC1,AGTR1	dist=174831;dist=1106321	NA	NA	ncRNA_exonic	ENSG00000240804	NA	NA	NA	NA	NA	3q24	NA	NA	Name=2	NA	rs62276285	0.06	0.06	0.063	0.0776757	0.0606	0.0536	0.0317	0.1029	0.1186	0.06	0.06	0.04	0.09	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.306774	NA	NA	NA	NA	NA	0.058	NA	4.9394
1158	5	109155658	109155658	A	G	intronic	MAN2A1	NA	NA	NA	intronic	ENSG00000112893	NA	NA	NA	NA	NA	5q21.3	NA	Name=CTCF	NA	NA	rs10055921	0.06	0.06	0.068	0.0850639	0.0606	0.005	0.0403	0.1755	0.1022	0.05	NA	0.06	0.15	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.628261	NA	NA	NA	NA	NA	0.065	NA	4.9394
1158	21	44283785	44283785	G	A	intronic	WDR4	NA	NA	NA	intronic	ENSG00000160193	NA	NA	NA	NA	NA	21q22.3	NA	NA	Name=4	NA	rs112237505	0.03	0.03	0.027	0.0289537	0.0606	0.001	0.0274	0.0091	0.0532	0.07	0.0017	0.03	0.02	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.703495	NA	NA	NA	NA	NA	NA	NA	4.9394
1158	22	45255580	45255580	G	C	intronic	ARHGAP8,PRR5-ARHGAP8	NA	NA	NA	exonic	ENSG00000248405	NA	unknown	UNKNOWN	NA	NA	22q13.31	NA	NA	NA	NA	rs7510897	0.23	0.23	0.232	0.224641	0.1899	0.3562	0.1066	0.2088	0.2301	0.19	0.39	0.13	0.18	0.2011	0.39	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.926	T	0.000	T	.	1.559	11.17	-0.836	-0.197	0.904	3.538	1.559453	1.559453	NA	0.170156	0.205856	NA	0.254	NA	4.938844
1158	1	118571089	118571089	C	A	intronic	SPAG17	NA	NA	NA	intronic	ENSG00000155761	NA	NA	NA	NA	NA	1p12	NA	NA	Name=6	NA	rs17037839	0.12	0.12	0.123	0.13778	0.0616	0.3204	0.0432	0.0688	0.1881	0.06	0.29	0.04	0.08	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000181	NA	NA	NA	NA	NA	0.043	NA	4.9384
1158	9	429617	429617	C	T	intronic	DOCK8	NA	NA	NA	intronic	ENSG00000107099	NA	NA	NA	Score=278;Name=lod=18	NA	9p24.3	NA	NA	NA	NA	rs77193342	0.03	0.03	0.023	0.0259585	0.0616	0.0069	0.0303	0.0038	0.0358	0.06	0.01	0.04	0.01	NA	0.076	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.075881	3.075881	NA	NA	NA	NA	0.051	NA	4.9384
1158	9	109879319	109879319	T	G	intergenic	MIR548Q,RAD23B	dist=30603;dist=166198	NA	NA	ncRNA_exonic	ENSG00000225531	NA	NA	NA	Score=740;Name=lod=1361	NA	9q31.2	NA	NA	NA	NA	rs4979300	0.03	0.03	0.028	0.023762	0.0616	NA	0.0231	0.0234	0.0102	0.06	NA	0.02	0.02	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.984334	NA	NA	NA	NA	NA	0.072	NA	4.9384
1158	12	58217927	58217927	C	T	intronic	CTDSP2	NA	NA	NA	intronic	ENSG00000175215	NA	NA	NA	NA	NA	12q14.1	NA	Name=JunD	NA	NA	rs78073833	0.03	0.03	0.028	0.0263578	0.0616	0.001	0.0375	0.0076	0.0337	0.06	NA	0.04	0.01	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.532148	NA	NA	NA	NA	NA	0.014	NA	4.9384
1158	19	2110746	2110746	G	A	exonic	AP3D1	NA	synonymous SNV	AP3D1:NM_003938:exon25:c.C2949T:p.S983S,AP3D1:NM_001261826:exon27:c.C3135T:p.S1045S	exonic	ENSG00000065000	NA	synonymous SNV	ENSG00000065000:ENST00000350812:exon20:c.C2442T:p.S814S,ENSG00000065000:ENST00000345016:exon25:c.C2949T:p.S983S,ENSG00000065000:ENST00000356926:exon26:c.C2826T:p.S942S,ENSG00000065000:ENST00000355272:exon27:c.C3135T:p.S1045S	NA	NA	19p13.3	NA	NA	NA	NA	rs20567	0.32	0.32	0.315	0.32508	0.1968	0.3333	0.2075	0.4879	0.3119	0.19	0.38	0.22	0.52	0.311	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.895521	NA	NA	0.220612	0.451998	NA	0.29	NA	4.9382546
1158	18	67801786	67801786	T	C	intronic	RTTN	NA	NA	NA	intronic	ENSG00000176225	NA	NA	NA	NA	NA	18q22.2	NA	NA	NA	NA	rs75225724	0.01	0.01	0.007	0.00758786	0.0199	NA	0.0072	0.0008	0.0123	0.02	NA	0.01	NA	0.0175	0.024	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.229171	NA	NA	0.024375	0.005982	NA	0.014	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118202.2;CLNDSDB=.;CLNDSDBID=.	4.938225
1158	14	106174261	106174261	C	G	intergenic	ELK2AP,KIAA0125	dist=35117;dist=209577	NA	NA	exonic	ENSG00000211895	NA	nonsynonymous SNV	ENSG00000211895:ENST00000390547:exon2:c.G528C:p.E176D	NA	NA	14q32.33	NA	Name=Pol2-4H8	NA	NA	rs1407	0.33	0.33	0.225	0.330072	0.2833	0.3304	0.513	0.146	0.4969	0.3	0.45	0.46	0.16	0.345	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.349298	NA	NA	0.266879	0.176678	NA	0.029	NA	4.9381544
1158	10	115312811	115312811	T	C	UTR5	HABP2	NM_004132:c.-70T>C	NA	NA	UTR5	ENSG00000148702	ENST00000351270:c.-70T>C	NA	NA	NA	NA	10q25.3	NA	NA	Name=15	NA	rs2240879	0.31	0.31	0.287	0.322284	0.3956	0.1657	0.2939	0.3003	0.4581	0.4	0.17	0.32	0.3	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.964017	NA	NA	NA	NA	NA	0.319	NA	4.9377334
1158	14	24534827	24534827	C	G	intronic	LRRC16B	NA	NA	NA	intronic	ENSG00000186648	NA	NA	NA	Score=304;Name=lod=23	NA	14q11.2	NA	NA	NA	NA	rs35625248	0.01	0.01	0.009	0.00778754	0.0229	NA	0.0115	NA	0.0082	0.02	NA	0.01	0.002	0.0155	0.024	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.040566	NA	NA	0.02407	0.004085	NA	0.007	NA	4.93753
1158	2	139170794	139170794	T	A	intergenic	HNMT,SPOPL	dist=396860;dist=88556	NA	NA	ncRNA_exonic	ENSG00000232915	NA	NA	NA	Score=542;Name=lod=213	NA	2q22.1	NA	NA	NA	NA	rs79138620	0.03	0.03	0.023	0.0169728	0.0626	NA	0.013	0.0076	0.0031	0.07	NA	0.01	0.01	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.35312	NA	NA	NA	NA	NA	0.014	NA	4.9374
1158	6	38820943	38820943	C	T	intronic	DNAH8	NA	NA	NA	intronic	ENSG00000124721	NA	NA	NA	NA	NA	6p21.2	NA	Name=MafK_(ab50322)	NA	NA	rs112343474	0.01	0.01	NA	0.00638978	0.0169	NA	0.0115	0.0008	0.0061	0.01	NA	0.01	NA	0.0154	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.017913	NA	NA	0.030486	0.004768	NA	NA	NA	4.937214
1158	17	10537165	10537165	T	C	intronic	MYH3	NA	NA	NA	intronic	ENSG00000109063	NA	NA	NA	NA	NA	17p13.1	NA	Name=Oct-2,POU2F2	NA	NA	rs77479161	0.03	0.03	0.024	0.0221645	0.0636	NA	0.0331	0.0053	0.0174	0.06	NA	0.02	0.01	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.543216	NA	NA	NA	NA	NA	0.029	NA	4.9364
1158	6	37751410	37751410	A	C	intergenic	MDGA1,ZFAND3	dist=85644;dist=35897	NA	NA	intergenic	ENSG00000112139,ENSG00000225945	dist=84328;dist=32143	NA	NA	NA	NA	6p21.2	NA	Name=Pol2	Name=37	NA	rs6458024	0.53	0.53	0.531	0.527157	0.3976	0.7728	0.3545	0.5666	0.4765	0.4	0.77	0.38	0.57	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.255686	NA	NA	NA	NA	NA	0.565	NA	4.9357334
1158	16	10205788	10205788	A	G	intronic	GRIN2A	NA	NA	NA	ncRNA_exonic	ENSG00000261647	NA	NA	NA	Score=809;Name=lod=2586	NA	16p13.2	NA	NA	NA	NA	rs11646734	0.42	0.42	0.415	0.427716	0.3976	0.4881	0.3573	0.3986	0.4857	0.4	0.49	0.38	0.4	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.536947	NA	NA	NA	NA	NA	0.333	NA	4.9357333
1158	8	28384712	28384712	A	G	exonic	FZD3	NA	synonymous SNV	FZD3:NM_145866:exon4:c.A435G:p.L145L,FZD3:NM_017412:exon5:c.A435G:p.L145L	exonic	ENSG00000104290	NA	synonymous SNV	ENSG00000104290:ENST00000537916:exon4:c.A435G:p.L145L,ENSG00000104290:ENST00000240093:exon5:c.A435G:p.L145L	Score=607;Name=lod=389	NA	8p21.1	NA	NA	NA	NA	rs2241802	0.54	0.54	0.533	0.542332	0.5944	0.5675	0.598	0.3949	0.6227	0.6	0.53	0.58	0.45	0.569	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.283961	NA	NA	0.567674	0.425556	NA	0.529	NA	4.9355926
1158	1	220490046	220490046	G	A	intergenic	RAB3GAP2,MARK1	dist=44203;dist=211522	NA	NA	ncRNA_exonic	ENSG00000232883	NA	NA	NA	Score=542;Name=lod=212	NA	1q41	NA	NA	NA	NA	rs7516304	0.15	0.15	0.16	0.159545	0.0646	0.2133	0.1441	0.2519	0.0879	0.06	0.24	0.11	0.23	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.959258	NA	NA	NA	NA	NA	0.152	NA	4.9354
1158	9	29826456	29826456	A	G	intergenic	LINGO2,LOC401497	dist=613458;dist=562477	NA	NA	ncRNA_exonic	ENSG00000230097	NA	NA	NA	Score=511;Name=lod=159	NA	9p21.1	NA	NA	NA	NA	rs16915335	0.11	0.11	0.139	0.11861	0.0646	0.0367	0.049	0.3132	0.045	0.06	0.05	0.05	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.345452	NA	NA	NA	NA	NA	0.145	NA	4.9354
1158	14	54458283	54458283	C	A	intergenic	BMP4,CDKN3	dist=34729;dist=405390	NA	NA	ncRNA_exonic	ENSG00000224004	NA	NA	NA	Score=489;Name=lod=130	NA	14q22.2	NA	NA	NA	NA	rs117177052	0.05	0.05	0.039	0.0351438	0.0646	NA	0.0403	0.056	0.0092	0.07	NA	0.05	0.06	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.739325	NA	NA	NA	NA	NA	0.08	NA	4.9354
1158	1	247769592	247769592	C	T	exonic	OR2G3	NA	synonymous SNV	OR2G3:NM_001001914:exon1:c.C705T:p.H235H	exonic	ENSG00000177476	NA	synonymous SNV	ENSG00000177476:ENST00000320002:exon1:c.C705T:p.H235H	NA	NA	1q44	NA	NA	NA	NA	rs1151683	0.31	0.31	0.278	0.309904	0.2217	0.3413	0.3689	0.3048	0.3333	0.24	0.35	0.35	0.34	0.2776	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.748236	NA	NA	0.232326	0.304585	NA	0.304	NA	4.9350406
1158	5	140803241	140803241	C	A	exonic	PCDHGA11	NA	nonsynonymous SNV	PCDHGA11:NM_032091:exon1:c.C2447A:p.S816Y	intronic	ENSG00000081853,ENSG00000204956,ENSG00000253305,ENSG00000253485,ENSG00000253537,ENSG00000253731,ENSG00000253767,ENSG00000253846,ENSG00000253873,ENSG00000253910,ENSG00000253953,ENSG00000254122,ENSG00000254221,ENSG00000254245,ENSG00000261934,ENSG00000262209,ENSG00000262576	NA	NA	NA	NA	NA	5q31.3	NA	NA	NA	NA	rs57195665	0.1	0.1	0.084	0.113219	0.0596	0.1171	0.1499	0.1195	0.1299	0.07	0.12	0.13	0.11	0.0978	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.014045	3.014045	NA	0.074231	0.11285	NA	0.08	NA	4.9350357
1159	10	27349268	27349268	A	G	intronic	ANKRD26	NA	NA	NA	intronic	ENSG00000107890	NA	NA	NA	Score=300;Name=lod=22	NA	10p12.1	NA	NA	NA	NA	rs149655759	0.01	0.01	0.005	0.00958466	0.0209	0.001	0.0159	NA	0.0153	0.02	NA	0.02	NA	0.0192	0.025	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.123078	NA	NA	0.025197	0.004422	NA	0.007	NA	4.934703
1159	17	36047276	36047276	G	T	UTR3	HNF1B	NM_001165923:c.*99C>A,NM_000458:c.*99C>A	NA	NA	UTR3	ENSG00000108753	ENST00000225893:c.*99C>A,ENST00000561193:c.*99C>A,ENST00000427275:c.*7C>A,ENST00000560016:c.*7C>A	NA	NA	NA	NA	17q12	Score=916;Name=V$AREB6_03	NA	NA	NA	rs2229295	0.24	0.24	0.27	0.268371	0.1988	0.1042	0.1686	0.553	0.1953	0.17	0.1	0.19	0.53	0.1999	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.44746	1.44746	NA	NA	NA	NA	0.123	NA	4.9346334
1159	14	91059742	91059742	G	A	intronic	TTC7B	NA	NA	NA	intronic	ENSG00000165914	NA	NA	NA	NA	NA	14q32.11	NA	NA	Name=2	NA	rs118061128	0.03	0.03	0.038	0.0245607	0.0656	0.001	0.0504	0.0083	0.0102	0.07	0.0017	0.05	0.01	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.313838	NA	NA	NA	NA	NA	0.022	NA	4.9344
1159	18	10637238	10637238	A	G	intergenic	NAPG,PIEZO2	dist=84472;dist=33006	NA	NA	ncRNA_exonic	ENSG00000265038	NA	NA	NA	Score=488;Name=lod=128	NA	18p11.22	NA	NA	NA	NA	rs111911862	0.03	0.03	0.02	0.0217652	0.0656	0.001	0.0202	0.003	0.0245	0.07	NA	0.02	0.002	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.964323	NA	NA	NA	NA	NA	NA	NA	4.9344
1159	8	125035788	125035788	G	C	exonic	FER1L6	NA	synonymous SNV	FER1L6:NM_001039112:exon18:c.G2238C:p.A746A	exonic	ENSG00000214814	NA	synonymous SNV	ENSG00000214814:ENST00000399018:exon17:c.G2238C:p.A746A,ENSG00000214814:ENST00000522917:exon18:c.G2238C:p.A746A	NA	NA	8q24.13	NA	Name=PU.1	NA	NA	rs4358790	0.57	0.57	0.584	0.551917	0.5924	0.5198	0.3948	0.68	0.4816	0.58	0.52	0.46	0.7	0.5422	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.779588	NA	NA	0.597729	0.64771	ID=COSM150538;OCCURENCE=1(stomach)	0.529	NA	4.9343376
1159	6	112537682	112537682	A	G	intronic	LAMA4	NA	NA	NA	intronic	ENSG00000112769	NA	NA	NA	NA	NA	6q21	NA	NA	NA	NA	rs78871662	0.01	0.01	0.011	0.0121805	0.0268	NA	0.0144	0.0023	0.0215	0.03	NA	0.01	0.01	0.0197	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.450921	NA	NA	0.019535	0.005901	NA	0.007	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000037342.1|RCV000126538.1;CLNDSDB=.|.;CLNDSDBID=.|.	4.933965
1159	9	33625082	33625082	G	C	ncRNA_exonic	ANXA2P2	NA	NA	NA	ncRNA_exonic	ENSG00000231991	NA	NA	NA	Score=667;Name=lod=687	NA	9p13.3	NA	NA	NA	NA	rs10758216	0.31	0.31	0.3	0.297724	0.3777	0.2956	0.3256	0.2905	0.2076	0.36	0.26	0.33	0.27	0.3553	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.01577	NA	NA	NA	NA	ID=COSM150592;OCCURENCE=1(stomach)	0.428	NA	4.9336666
1159	11	124793716	124793716	G	A	exonic	HEPACAM	NA	synonymous SNV	HEPACAM:NM_152722:exon3:c.C618T:p.R206R	exonic	ENSG00000165478	NA	synonymous SNV	ENSG00000165478:ENST00000298251:exon3:c.C618T:p.R206R	NA	NA	11q24.2	NA	NA	NA	NA	rs10790716	0.15	0.15	0.136	0.135982	0.2624	0.0714	0.1513	0.1074	0.1002	0.25	0.08	0.15	0.09	0.2041	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.943136	NA	NA	0.266574	0.136756	NA	0.152	NA	4.9335926
1159	3	197574960	197574960	G	A	intronic	LRCH3	NA	NA	NA	intronic	ENSG00000186001	NA	NA	NA	NA	NA	3q29	NA	NA	Name=69	NA	rs77727730	0.03	0.03	0.033	0.0363419	0.0666	0.001	0.0288	0.028	0.0583	0.07	NA	0.04	0.02	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.133571	NA	NA	NA	NA	NA	0.036	NA	4.9334
1159	4	41266046	41266046	C	A	intronic	UCHL1	NA	NA	NA	intronic	ENSG00000154277	NA	NA	NA	NA	NA	4p13	NA	NA	Name=4	NA	rs71608068	0.03	0.03	0.025	0.0257588	0.0666	0.004	0.0202	0.0008	0.044	0.08	0.01	0.02	0.002	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.644747	NA	NA	NA	NA	NA	0.014	NA	4.9334
1159	10	135093511	135093511	C	T	intronic	TUBGCP2	NA	NA	NA	intronic	ENSG00000130640	NA	NA	NA	NA	NA	10q26.3	NA	NA	Name=5	NA	rs41299173	0.03	0.03	0.03	0.0227636	0.0666	0.001	0.0288	0.0083	0.0153	0.07	NA	0.04	0.02	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.096746	NA	NA	NA	NA	NA	0.014	NA	4.9334
1159	13	52482451	52482451	G	A	intergenic	CCDC70,ATP7B	dist=42079;dist=24355	NA	NA	ncRNA_exonic	ENSG00000232872	NA	NA	NA	NA	NA	13q14.3	NA	Name=NFKB	NA	NA	rs113880756	0.05	0.05	0.086	0.0623003	0.0666	0.0813	0.036	0.025	0.1074	0.07	0.08	0.03	0.03	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.854266	NA	NA	NA	NA	NA	0.043	NA	4.9334
1159	13	79664926	79664926	T	C	intergenic	LINC00331,RBM26	dist=250741;dist=229174	NA	NA	ncRNA_exonic	ENSG00000236277	NA	NA	NA	Score=647;Name=lod=569	NA	13q31.1	NA	NA	NA	NA	rs58532358	0.07	0.07	0.07	0.0780751	0.0666	NA	0.0749	0.1868	0.0256	0.06	NA	0.06	0.16	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.003075	NA	NA	NA	NA	NA	0.152	NA	4.9334
1159	6	160211728	160211728	T	G	intronic	MRPL18	NA	NA	NA	intronic	ENSG00000112110	NA	NA	NA	NA	NA	6q25.3	NA	Name=Pol2	Name=32	NA	rs11757681	0.37	0.37	0.325	0.379992	0.5139	0.1627	0.5965	0.2466	0.4928	0.53	0.15	0.56	0.25	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.064503	NA	NA	0.552797	0.273121	NA	0.312	NA	4.933303
1159	19	16060021	16060021	C	T	exonic	OR10H4	NA	synonymous SNV	OR10H4:NM_001004465:exon1:c.C204T:p.S68S	exonic	ENSG00000176231	NA	synonymous SNV	ENSG00000176231:ENST00000322107:exon1:c.C204T:p.S68S	NA	NA	19p13.12	NA	NA	NA	NA	rs16980821	0.25	0.25	0.275	0.241613	0.2644	0.0526	0.1772	0.4629	0.1595	0.25	0.07	0.23	0.48	0.2306	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.346344	NA	NA	0.238372	0.419655	NA	0.333	NA	4.9332946
1159	3	98503776	98503776	A	G	intronic	ST3GAL6	NA	NA	NA	intronic	ENSG00000064225	NA	NA	NA	NA	NA	3q12.1	NA	Name=STAT3	Name=45	NA	rs999147	0.29	0.29	0.284	0.309105	0.3429	0.2202	0.3199	0.3374	0.32	0.36	0.19	0.3	0.29	0.3532	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.079203	NA	NA	0.370814	0.348162	NA	0.304	NA	4.933086
1159	12	30872178	30872178	G	A	intronic	CAPRIN2	NA	NA	NA	UTR3	ENSG00000110888	ENST00000537553:c.*3009C>T	NA	NA	NA	NA	12p11.21	NA	NA	Name=83	NA	rs73079962	0.05	0.05	0.05	0.0625	0.0805	0.0149	0.0764	0.0287	0.1288	0.07	0.01	0.08	0.04	0.0708	0.082	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.353034	1.353034	NA	0.082442	0.030867	NA	0.072	NA	4.9329247
1159	13	111111173	111111173	G	A	exonic	COL4A2	NA	synonymous SNV	COL4A2:NM_001846:exon22:c.G1488A:p.P496P	exonic	ENSG00000134871	NA	synonymous SNV	ENSG00000134871:ENST00000360467:exon22:c.G1488A:p.P496P	NA	NA	13q34	Score=908;Name=V$NRF2_01	NA	NA	NA	rs7990214	0.5	0.5	0.503	0.491414	0.5974	0.2232	0.4942	0.6505	0.4417	0.6	0.2	0.56	0.66	0.5288	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.447361	NA	NA	0.607613	0.648588	NA	0.543	NA	4.9328536
1159	3	47452786	47452786	G	A	exonic	PTPN23	NA	synonymous SNV	PTPN23:NM_015466:exon20:c.G3498A:p.E1166E	exonic	ENSG00000076201	NA	synonymous SNV	ENSG00000076201:ENST00000431726:exon19:c.G3120A:p.E1040E,ENSG00000076201:ENST00000265562:exon20:c.G3498A:p.E1166E	Score=467;Name=lod=105	NA	3p21.31	NA	NA	NA	NA	rs1531875	0.48	0.48	0.463	0.458866	0.6024	0.4633	0.5202	0.2405	0.5583	0.6	0.46	0.52	0.29	0.5413	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.01915	NA	NA	0.590179	0.280327	ID=COSM1423596;OCCURENCE=1(large_intestine)	0.536	NA	4.9327876
1159	14	81449363	81449363	G	A	intronic	TSHR	NA	NA	NA	ncRNA_exonic	ENSG00000258915	NA	NA	NA	NA	NA	14q31.1	NA	NA	Name=8	NA	rs3783948	0.32	0.32	0.268	0.308906	0.4006	0.3968	0.3646	0.084	0.3885	0.4	0.38	0.38	0.08	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.54908	NA	NA	NA	NA	NA	0.283	NA	4.9327333
1159	5	96116940	96116940	G	A	intronic	ERAP1	NA	NA	NA	intronic	ENSG00000164307	NA	NA	NA	NA	NA	5q15	NA	Name=CEBPB,JunD,c-Jun,c-Fos,STAT3	Name=108	NA	rs27042	0.33	0.33	0.357	0.399161	0.3429	0.2917	0.2464	0.5129	0.5225	0.33	0.25	0.27	0.47	0.3672	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.326838	NA	NA	0.357376	0.461994	NA	0.37	NA	4.932524
1159	7	100320221	100320221	G	A	intronic	EPO	NA	NA	NA	intronic	ENSG00000130427	NA	NA	NA	NA	NA	7q22.1	NA	Name=USF-1	NA	NA	rs7789679	0.03	0.03	0.019	0.0307508	0.0676	0.002	0.0418	0.0038	0.0511	0.06	0.0035	0.02	0.0041	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.978139	1.978139	NA	NA	NA	NA	0.072	NA	4.9324
1159	20	44197329	44197329	C	G	intronic	WFDC8	NA	NA	NA	ncRNA_exonic	ENSG00000230860	NA	NA	NA	Score=677;Name=lod=751	NA	20q13.12	NA	NA	NA	NA	rs6104230	0.26	0.26	0.245	0.25599	0.4016	0.004	0.3401	0.3101	0.2331	0.4	0.0017	0.36	0.27	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.56637	NA	NA	NA	NA	NA	0.384	NA	4.9317333
1159	3	38671944	38671944	G	A	intronic	SCN5A	NA	NA	NA	intronic	ENSG00000183873	NA	NA	NA	Score=259;Name=lod=15	NA	3p22.2	NA	NA	NA	NA	rs7627488	0.05	0.05	0.044	0.0644968	0.0179	NA	0.0245	0.1944	0.0317	0.02	NA	0.02	0.16	0.0336	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.502145	3.502145	NA	0.017517	0.146989	NA	0.007	NA	4.930983
1159	22	41752747	41752747	G	A	exonic	ZC3H7B	NA	synonymous SNV	ZC3H7B:NM_017590:exon22:c.G2616A:p.T872T	exonic	ENSG00000100403	NA	synonymous SNV	ENSG00000100403:ENST00000351589:exon21:c.G2616A:p.T872T,ENSG00000100403:ENST00000352645:exon22:c.G2616A:p.T872T	NA	NA	22q13.2	NA	NA	NA	NA	rs12484074	0.2	0.2	0.143	0.220048	0.2396	0.0764	0.5159	0.0537	0.363	0.24	0.08	0.52	0.06	0.2631	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.347092	1.347092	NA	0.233023	0.082615	NA	0.246	NA	4.9309436
1159	10	50121322	50121322	G	A	intronic	LRRC18,WDFY4	NA	NA	NA	ncRNA_UTR3	ENSG00000165383	NA	NA	NA	Score=289;Name=lod=20	NA	10q11.23	NA	NA	NA	NA	rs2663055	0.26	0.26	0.225	0.224042	0.4026	0.1776	0.3746	0.0234	0.2526	0.4	0.18	0.36	0.03	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.366627	NA	NA	NA	NA	NA	0.145	NA	4.9307333
1159	19	15763691	15763691	G	A	exonic	CYP4F3	NA	synonymous SNV	CYP4F3:NM_000896:exon9:c.G1044A:p.P348P,CYP4F3:NM_001199208:exon9:c.G1044A:p.P348P,CYP4F3:NM_001199209:exon9:c.G1044A:p.P348P	exonic	ENSG00000186529	NA	synonymous SNV	ENSG00000186529:ENST00000585846:exon8:c.G1044A:p.P348P,ENSG00000186529:ENST00000221307:exon9:c.G1044A:p.P348P,ENSG00000186529:ENST00000586182:exon9:c.G1044A:p.P348P,ENSG00000186529:ENST00000591058:exon9:c.G1044A:p.P348P	NA	NA	19p13.12	NA	NA	NA	NA	rs1805041	0.2	0.2	0.184	0.195887	0.2694	0.1558	0.1671	0.1067	0.3027	0.27	0.17	0.2	0.12	0.219	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.752794	NA	NA	0.247558	0.152519	NA	0.203	NA	4.9307086
1159	15	64970798	64970798	G	A	intronic	ZNF609	NA	NA	NA	intronic	ENSG00000180357	NA	NA	NA	NA	NA	15q22.31	NA	NA	Name=8	NA	rs16948172	0.1	0.1	0.112	0.1252	0.0696	0.001	0.0519	0.3306	0.0849	0.07	NA	0.06	0.3	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.493237	NA	NA	NA	NA	NA	0.174	NA	4.9304
1159	8	146171437	146171437	A	G	exonic	ZNF16	NA	synonymous SNV	ZNF16:NM_006958:exon2:c.T156C:p.D52D,ZNF16:NM_001029976:exon3:c.T156C:p.D52D	exonic	ENSG00000170631	NA	synonymous SNV	ENSG00000170631:ENST00000394909:exon2:c.T156C:p.D52D,ENSG00000170631:ENST00000527811:exon2:c.T156C:p.D52D,ENSG00000170631:ENST00000532351:exon2:c.T156C:p.D52D,ENSG00000170631:ENST00000276816:exon3:c.T156C:p.D52D	NA	NA	8q24.3	NA	NA	NA	NA	rs3735785	0.24	0.24	0.254	0.235224	0.2535	0.3284	0.2061	0.171	0.228	0.25	0.34	0.22	0.12	0.2402	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.391193	NA	NA	0.242791	0.170449	NA	0.232	NA	4.9301756
1159	17	39723990	39723990	T	A	exonic	KRT9	NA	synonymous SNV	KRT9:NM_000226:exon7:c.A1407T:p.G469G	exonic	ENSG00000171403	NA	synonymous SNV	ENSG00000171403:ENST00000246662:exon7:c.A1407T:p.G469G,ENSG00000171403:ENST00000588431:exon8:c.A708T:p.G236G	Score=251;Name=lod=14	NA	17q21.2	NA	NA	NA	NA	rs3890472	0.64	0.64	0.627	0.647364	0.5616	0.9444	0.7147	0.385	0.7362	0.56	0.95	0.67	0.39	0.6241	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.670566	1.670566	NA	0.550814	0.39764	ID=COSM1179685;OCCURENCE=1(prostate)	0.601	NA	4.9301526
1159	1	205592698	205592698	C	T	intronic	ELK4	NA	NA	NA	intronic	ENSG00000158711	NA	NA	NA	Score=289;Name=lod=20	NA	1q32.1	NA	NA	NA	NA	rs34310773	0.15	0.15	0.119	0.196486	0.0706	0.373	0.1153	0.146	0.2699	0.07	0.32	0.09	0.12	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.810803	NA	NA	NA	NA	NA	0.145	NA	4.9294
1159	12	95928113	95928113	C	A	intronic	USP44	NA	NA	NA	intronic	ENSG00000136014	NA	NA	NA	Score=410;Name=lod=62	NA	12q22	NA	NA	NA	NA	rs11108094	0.03	0.03	0.025	0.0299521	0.0706	0.001	0.0303	0.0023	0.0552	0.07	0.0017	0.02	0.0041	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.234165	NA	NA	NA	NA	NA	0.022	NA	4.9294
1159	11	4790857	4790857	A	G	exonic	OR51F1	NA	synonymous SNV	OR51F1:NM_001004752:exon1:c.T291C:p.Y97Y	exonic	ENSG00000188069	NA	synonymous SNV	ENSG00000188069:ENST00000343430:exon1:c.T291C:p.Y97Y,ENSG00000188069:ENST00000380383:exon1:c.T312C:p.Y104Y	NA	NA	11p15.4	NA	NA	NA	NA	rs11033797	0.23	0.23	0.231	0.215655	0.2704	NA	0.2017	0.4569	0.0654	0.25	NA	0.23	0.46	0.2135	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.007038	NA	NA	0.253374	0.44707	NA	0.29	NA	4.9293926
1159	11	4790671	4790671	C	T	exonic	OR51F1	NA	synonymous SNV	OR51F1:NM_001004752:exon1:c.G477A:p.L159L	exonic	ENSG00000188069	NA	synonymous SNV	ENSG00000188069:ENST00000343430:exon1:c.G477A:p.L159L,ENSG00000188069:ENST00000380383:exon1:c.G498A:p.L166L	NA	NA	11p15.4	NA	NA	NA	NA	rs11033795	0.23	0.23	0.237	0.215655	0.2704	NA	0.2017	0.4569	0.0654	0.25	NA	0.23	0.46	0.2137	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.785648	NA	NA	0.25349	0.44707	NA	0.29	NA	4.9290766
1159	4	23830267	23830267	T	C	intronic	PPARGC1A	NA	NA	NA	intronic	ENSG00000109819	NA	NA	NA	Score=746;Name=lod=1441	NA	4p15.2	NA	NA	NA	NA	rs35133598	0.01	0.01	0.004	0.00898562	0.0278	NA	0.0144	0.0023	0.0041	0.03	NA	0.01	0.002	0.0179	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.796044	1.796044	NA	0.025465	0.004085	NA	0.007	NA	4.928835
1159	11	62140069	62140069	G	T	intronic	ASRGL1	NA	NA	NA	ncRNA_exonic	ENSG00000254454	NA	NA	NA	Score=807;Name=lod=2528	NA	11q12.3	NA	NA	NA	NA	rs10792346	0.32	0.32	0.298	0.3127	0.4046	0.3938	0.3329	0.0756	0.4407	0.41	0.36	0.36	0.12	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.132028	NA	NA	NA	NA	NA	0.297	NA	4.9287333
1159	2	161138652	161138652	G	A	intronic	RBMS1	NA	NA	NA	intronic	ENSG00000153250	NA	NA	NA	NA	NA	2q24.2	NA	NA	Name=71	NA	rs1870105	0.05	0.05	0.045	0.0628994	0.0716	0.0347	0.0389	0.0287	0.1462	0.07	0.03	0.05	0.04	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.617363	NA	NA	NA	NA	NA	0.051	NA	4.9284
1159	5	42892803	42892803	C	T	intergenic	SEPP1,LOC648987	dist=80779;dist=122028	NA	NA	ncRNA_exonic	ENSG00000249092	NA	NA	NA	Score=657;Name=lod=624	NA	5p12	NA	NA	NA	NA	rs16874465	0.05	0.05	0.05	0.0519169	0.0716	0.003	0.0706	0.0847	0.0245	0.06	0.0017	0.09	0.07	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.303688	NA	NA	NA	NA	NA	0.08	NA	4.9284
1159	11	117095283	117095283	C	T	intronic	PCSK7	NA	NA	NA	intronic	ENSG00000160613	NA	NA	NA	NA	NA	11q23.3	NA	Name=USF-1,STAT2,eGFP-GATA2,Pol2(b),TAL1_(SC-12984),Pol2,eGFP-JunD,p300_(F-4),GATA-1,TAF1,ETS1,GABP	NA	NA	rs59781045	0.11	0.11	0.105	0.124201	0.0716	0.0377	0.0951	0.2405	0.1309	0.07	0.04	0.09	0.27	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.256781	NA	NA	NA	NA	NA	0.123	NA	4.9284
1159	19	13339673	13339673	G	A	intronic	CACNA1A	NA	NA	NA	intronic	ENSG00000141837	NA	NA	NA	NA	NA	19p13.2	NA	Name=CTCF	NA	NA	rs17846918	0.05	0.05	0.053	0.0646965	0.0716	0.0188	0.0375	0.0847	0.0971	0.07	0.02	0.04	0.08	NA	0.087	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.154955	NA	NA	NA	NA	NA	0.065	NA	4.9284
1159	19	53507299	53507299	C	G	intergenic	ZNF702P,ERVV-1	dist=10515;dist=10045	NA	NA	ncRNA_exonic	ENSG00000268282	NA	NA	NA	Score=648;Name=lod=571	NA	19q13.41	NA	NA	NA	NA	rs1650940	0.35	0.35	0.375	0.368011	0.0716	0.4385	0.219	0.7988	0.1237	0.08	0.42	0.2	0.78	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.204272	NA	NA	NA	NA	ID=COSN165920;OCCURENCE=1(breast)	0.362	NA	4.9284
1159	19	53508214	53508214	C	A	intergenic	ZNF702P,ERVV-1	dist=11430;dist=9130	NA	NA	ncRNA_exonic	ENSG00000268282	NA	NA	NA	Score=578;Name=lod=298	NA	19q13.41	NA	NA	NA	NA	rs1650937	0.33	0.33	0.347	0.343051	0.0716	0.4504	0.2075	0.7012	0.1237	0.08	0.42	0.19	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.428936	NA	NA	NA	NA	ID=COSN165923;OCCURENCE=1(NS)	0.333	NA	4.9284
1159	4	68442968	68442968	A	G	exonic	STAP1	NA	synonymous SNV	STAP1:NM_012108:exon4:c.A354G:p.T118T	exonic	ENSG00000035720	NA	synonymous SNV	ENSG00000035720:ENST00000265404:exon4:c.A354G:p.T118T,ENSG00000035720:ENST00000396225:exon4:c.A354G:p.T118T	Score=533;Name=lod=195	NA	4q13.2	NA	NA	NA	NA	rs11556614	0.43	0.43	0.415	0.398163	0.5835	0.1706	0.3977	0.4584	0.3609	0.59	0.17	0.45	0.47	0.518	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.450779	NA	NA	0.637093	0.483659	NA	0.471	NA	4.9280736
1159	14	58752112	58752112	G	A	ncRNA_intronic	FLJ31306	NA	NA	NA	ncRNA_exonic	ENSG00000180189	NA	NA	NA	Score=684;Name=lod=801	NA	14q23.1	NA	NA	NA	NA	rs8009527	0.65	0.65	0.655	0.680511	0.7386	0.4077	0.6931	0.8321	0.6881	0.72	0.38	0.71	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.139406	NA	NA	NA	NA	NA	0.688	NA	4.9280666
1159	3	9985656	9985656	C	T	exonic	CRELD1	NA	synonymous SNV	CRELD1:NM_001031717:exon11:c.C1119T:p.H373H	exonic	ENSG00000163703	NA	synonymous SNV	ENSG00000163703:ENST00000326434:exon11:c.C1119T:p.H373H	NA	NA	3p25.3	NA	NA	NA	NA	rs3774207	0.37	0.37	0.383	0.379992	0.2107	0.1558	0.3256	0.8132	0.2382	0.22	0.21	0.34	0.81	0.2785	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.57536	NA	NA	0.249419	0.710168	ID=COSM149327;OCCURENCE=1(stomach)	0.565	NA	4.9280476
1159	2	225298481	225298481	C	A	intergenic	FAM124B,CUL3	dist=31770;dist=36386	NA	NA	intergenic	ENSG00000124019,ENSG00000036257	dist=31679;dist=36386	NA	NA	NA	NA	2q36.2	NA	Name=POU5F1_(SC-9081),Max,TBP,p300,SP1,NANOG_(SC-33759)	Name=8	NA	rs10804321	0.43	0.43	0.08	0.473043	0.4056	0.37	0.3847	0.649	0.4734	0.38	0.37	0.39	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.95471	1.95471	NA	NA	NA	NA	NA	NA	4.9277334
1159	2	225298482	225298482	T	C	intergenic	FAM124B,CUL3	dist=31771;dist=36385	NA	NA	intergenic	ENSG00000124019,ENSG00000036257	dist=31680;dist=36385	NA	NA	NA	NA	2q36.2	NA	Name=NANOG_(SC-33759),SP1,TBP,p300,POU5F1_(SC-9081),Max	Name=8	NA	rs10804322	0.44	0.44	0.08	0.473043	0.4056	0.37	0.3847	0.649	0.4734	0.38	0.38	0.4	0.62	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.65253	1.65253	NA	NA	NA	NA	NA	NA	4.9277334
1159	16	68720470	68720470	A	G	intronic	CDH3	NA	NA	NA	ncRNA_exonic	ENSG00000261395	NA	NA	NA	Score=615;Name=lod=421	NA	16q22.1	NA	NA	NA	NA	rs3791	0.36	0.36	0.315	0.310304	0.4056	0.5139	0.3991	0.0242	0.3262	0.42	0.53	0.39	0.03	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.698253	1.698253	NA	NA	NA	NA	0.42	NA	4.9277333
1159	3	33426951	33426951	T	C	intronic	FBXL2	NA	NA	NA	intronic	ENSG00000153558	NA	NA	NA	NA	NA	3p22.3	NA	Name=Pol2-4H8,PU.1,GABP,ELF1_(SC-631)	NA	NA	rs115066682	0.01	0.01	0.009	0.0165735	0.0268	NA	0.0303	NA	0.0358	0.02	NA	0.04	NA	0.0218	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.147819	NA	NA	0.023721	0.004993	NA	0.08	NA	4.927679
1159	2	69267328	69267328	A	G	intronic	ANTXR1	NA	NA	NA	intronic	ENSG00000169604	NA	NA	NA	NA	NA	2p13.3	NA	NA	Name=7	NA	rs4527236	0.03	0.03	0.033	0.0233626	0.0726	NA	0.0375	0.0061	0.0102	0.07	NA	0.05	0.01	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.31189	NA	NA	NA	NA	NA	0.022	NA	4.9274
1159	5	42917536	42917536	G	A	intergenic	SEPP1,LOC648987	dist=105512;dist=97295	NA	NA	ncRNA_exonic	ENSG00000249516	NA	NA	NA	Score=634;Name=lod=501	NA	5p12	NA	NA	NA	NA	rs2548363	0.06	0.06	0.058	0.0632987	0.0726	0.003	0.0749	0.1241	0.0256	0.06	0.0017	0.09	0.1	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.013733	NA	NA	NA	NA	NA	0.087	NA	4.9274
1159	6	109649077	109649077	T	G	intergenic	CCDC162P,CD164	dist=19654;dist=38640	NA	NA	ncRNA_exonic	ENSG00000218632	NA	NA	NA	Score=478;Name=lod=117	NA	6q21	NA	NA	NA	NA	rs2066278	0.11	0.11	0.097	0.100639	0.0726	0.1607	0.1239	0.0598	0.1063	0.08	0.18	0.09	0.07	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.163927	NA	NA	NA	NA	NA	0.072	NA	4.9274
1159	14	59261651	59261651	G	A	intergenic	DACT1,DAAM1	dist=146613;dist=393730	NA	NA	ncRNA_exonic	ENSG00000213598	NA	NA	NA	Score=726;Name=lod=1185	NA	14q23.1	NA	NA	NA	NA	rs10483703	0.16	0.16	0.136	0.133986	0.0726	0.5109	0.0317	NA	0.0624	0.07	0.5	0.03	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.405981	2.405981	NA	NA	NA	NA	0.116	NA	4.9274
1159	19	23406165	23406165	T	C	downstream	ZNF724P	NA	NA	NA	exonic	ENSG00000196081	NA	synonymous SNV	ENSG00000196081:ENST00000418100:exon4:c.A882G:p.S294S	NA	NA	19p12	NA	Name=KAP1,SETDB1,ZNF274	Name=8	NA	rs2885604	0.86	0.86	0.849	0.871206	0.8648	0.876	0.8646	0.8177	0.9499	0.87	0.88	0.86	0.81	0.8745	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.108847	NA	NA	NA	NA	NA	0.855	NA	4.9273666
1159	6	36842427	36842427	C	G	intronic	PPIL1	NA	NA	NA	intronic	ENSG00000137168,ENSG00000198663	NA	NA	NA	NA	NA	6p21.2	NA	Name=ZBTB7A_(SC-34508),Max,c-Myc,AP-2gamma,GTF2F1_(RAP-74),CTCF,EBF1_(C-8),USF-1,E2F4,ELK4,GABP,HMGN3,TAF1,GATA-1,Pol2(b),CTCFL_(SC-98982),HA-E2F1,YY1_(C-20),Sin3Ak-20,E2F6,Pol2-4H8,Pol2,Mxi1_(bHLH),TCF4,YY1	Name=148	NA	rs2303993	0.54	0.54	0.482	0.509585	0.5358	0.6756	0.5692	0.3638	0.4663	0.53	0.68	0.56	0.35	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.660096	NA	NA	0.53713	0.41061	NA	0.594	NA	4.92707
1159	17	5126689	5126689	G	A	exonic	SCIMP	NA	synonymous SNV	SCIMP:NM_001271842:exon2:c.C84T:p.I28I,SCIMP:NM_207103:exon2:c.C84T:p.I28I	exonic	ENSG00000161929	NA	synonymous SNV	ENSG00000161929:ENST00000399600:exon2:c.C84T:p.I28I,ENSG00000161929:ENST00000571800:exon2:c.C84T:p.I28I,ENSG00000161929:ENST00000574081:exon2:c.C84T:p.I28I,ENSG00000161929:ENST00000574297:exon2:c.C84T:p.I28I	NA	NA	17p13.2	NA	Name=Pol2	NA	NA	rs2585271	0.39	0.39	0.344	0.335463	0.6014	0.1984	0.5937	0.1831	0.226	0.59	0.2	0.6	0.16	0.503	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.662394	NA	NA	0.635456	0.253731	NA	0.486	NA	4.9268106
1159	2	160546468	160546468	G	A	intergenic	BAZ2B,MARCH7	dist=73409;dist=22542	NA	NA	ncRNA_exonic	ENSG00000230783	NA	NA	NA	Score=776;Name=lod=1893	NA	2q24.2	NA	NA	NA	NA	rs13018444	0.05	0.05	0.03	0.0465256	0.0736	0.004	0.049	0.0318	0.0808	0.07	0.0017	0.07	0.04	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.354913	NA	NA	NA	NA	NA	0.022	NA	4.9264
1159	14	100759046	100759046	C	A	exonic	SLC25A29	NA	synonymous SNV	SLC25A29:NM_001039355:exon4:c.G486T:p.T162T	exonic	ENSG00000197119	NA	synonymous SNV	ENSG00000197119:ENST00000554912:exon2:c.G288T:p.T96T,ENSG00000197119:ENST00000539621:exon3:c.G288T:p.T96T,ENSG00000197119:ENST00000554291:exon3:c.G288T:p.T96T,ENSG00000197119:ENST00000556505:exon3:c.G288T:p.T96T,ENSG00000197119:ENST00000359232:exon4:c.G486T:p.T162T,ENSG00000197119:ENST00000555927:exon4:c.G288T:p.T96T	Score=535;Name=lod=199	NA	14q32.2	NA	NA	NA	NA	rs3825555	0.57	0.57	0.563	0.530351	0.5676	0.7083	0.6081	0.3865	0.4479	0.57	0.72	0.61	0.39	0.6059	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.961081	NA	NA	0.56707	0.435763	ID=COSM432664;OCCURENCE=1(breast)	0.471	NA	4.9260966
1159	8	92083424	92083424	A	G	exonic	OTUD6B	NA	synonymous SNV	OTUD6B:NM_016023:exon2:c.A231G:p.Q77Q	exonic	ENSG00000155100	NA	synonymous SNV	ENSG00000155100:ENST00000285420:exon2:c.A231G:p.Q77Q,ENSG00000155100:ENST00000522894:exon2:c.A201G:p.Q67Q	Score=592;Name=lod=340	NA	8q21.3	NA	NA	NA	NA	rs11557571	0.48	0.48	0.455	0.486222	0.5974	0.5833	0.4049	0.2262	0.681	0.62	0.56	0.43	0.21	0.5453	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.538559	NA	NA	0.59814	0.295733	NA	0.551	NA	4.9258266
1159	3	98502017	98502017	G	A	intronic	ST3GAL6	NA	NA	NA	ncRNA_exonic	ENSG00000249274	NA	NA	NA	Score=486;Name=lod=126	NA	3q12.1	NA	NA	NA	NA	rs12107050	0.34	0.34	0.361	0.355831	0.4076	0.2232	0.3501	0.4418	0.3272	0.42	0.19	0.34	0.39	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.049148	NA	NA	NA	NA	NA	0.348	NA	4.9257333
1159	20	62273435	62273435	G	A	intronic	STMN3	NA	NA	NA	intronic	ENSG00000197457	NA	NA	NA	NA	NA	20q13.33	NA	Name=YY1_(C-20),SMC3_(ab9263),SP1,Pol2,TAF1,CTCF,ELF1_(SC-631),Pol2-4H8,Egr-1,YY1,IRF1,TBP,Nrf1,c-Myc	Name=137	NA	rs186744824	0.36	0.36	NA	0.346446	0.501	0.0992	0.4294	0.4228	0.2802	0.49	0.1	0.44	0.42	0.5733	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.174689	NA	NA	NA	NA	NA	NA	NA	4.9257
1159	4	113377758	113377758	G	A	intergenic	ALPK1,NEUROG2	dist=13994;dist=56914	NA	NA	ncRNA_exonic	ENSG00000248697	NA	NA	NA	Score=682;Name=lod=789	NA	4q25	NA	NA	NA	NA	rs2074384	0.1	0.1	0.075	0.116014	0.0746	0.2778	0.062	0.0053	0.18	0.06	0.25	0.07	0.01	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.343202	1.343202	NA	NA	NA	NA	0.087	NA	4.9254
1159	6	31249267	31249267	G	C	intergenic	HLA-C,HLA-B	dist=9354;dist=72382	NA	NA	ncRNA_exonic	ENSG00000227939	NA	NA	NA	Score=849;Name=lod=3743	NA	6p21.33	NA	NA	NA	NA	rs35840219	0.09	0.09	0.069	0.0662939	0.0746	0.121	0.0994	0.0378	0.0164	0.08	0.13	0.09	0.04	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.275444	NA	NA	NA	NA	NA	0.101	NA	4.9254
1159	16	2110608	2110608	G	A	intronic	TSC2	NA	NA	NA	intronic	ENSG00000103197	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs12927333	0.04	0.04	0.033	0.0345447	0.0746	NA	0.0461	0.0023	0.0644	0.08	NA	0.07	0.0041	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.200984	NA	NA	NA	NA	NA	0.022	CLINSIG=untested;CLNDBN=Tuberous_sclerosis_syndrome;CLNREVSTAT=not;CLNACC=RCV000043173.2;CLNDSDB=GeneReviews:MedGen:OMIM:SNOMED_CT;CLNDSDBID=NBK1220:C0041341:191100:7199000	4.9254
1159	20	50346644	50346644	G	C	intronic	ATP9A	NA	NA	NA	intronic	ENSG00000054793	NA	NA	NA	NA	NA	20q13.2	NA	Name=Egr-1	NA	NA	rs35031713	0.08	0.08	0.081	0.0760783	0.0746	NA	0.0504	0.1687	0.0491	0.08	NA	0.07	0.17	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.540597	NA	NA	NA	NA	NA	0.051	NA	4.9254
1160	9	93636875	93636875	A	G	intronic	SYK	NA	NA	NA	intronic	ENSG00000165025	NA	NA	NA	NA	NA	9q22.2	NA	Name=CTCF	NA	NA	rs11787670	0.03	0.03	0.025	0.0267572	0.0755	NA	0.0461	0.0053	0.0194	0.06	NA	0.04	0.01	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.724892	NA	NA	NA	NA	NA	0.014	NA	4.9245
1160	14	66347118	66347118	G	A	intergenic	FUT8,LINC00238	dist=136279;dist=605991	NA	NA	ncRNA_exonic	ENSG00000258629	NA	NA	NA	Score=470;Name=lod=108	NA	14q23.3	NA	NA	NA	NA	rs58101060	0.11	0.11	0.098	0.13778	0.0755	0.0218	0.1902	0.2579	0.1217	0.07	0.02	0.17	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.568632	NA	NA	NA	NA	NA	0.101	NA	4.9245
1160	16	81204751	81204751	G	T	intronic	PKD1L2	NA	NA	NA	intronic	ENSG00000166473,ENSG00000269323	NA	NA	NA	NA	NA	16q23.2	NA	Name=BHLHE40,Ini1	NA	NA	rs79736308	0.09	0.09	0.066	0.0992412	0.0755	0.0268	0.2363	0.084	0.1217	0.08	0.02	0.2	0.09	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.458968	NA	NA	NA	NA	NA	0.058	NA	4.9245
1160	20	48600268	48600268	C	T	intronic	SNAI1	NA	NA	NA	intronic	ENSG00000124216	NA	NA	NA	NA	NA	20q13.13	NA	Name=Pol2	NA	NA	rs4141977	0.06	0.06	0.055	0.0449281	0.0755	0.0288	0.0519	0.0408	0.0307	0.09	0.04	0.07	0.03	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.41607	NA	NA	NA	NA	NA	0.022	NA	4.9245
1160	11	4790308	4790308	A	G	exonic	OR51F1	NA	synonymous SNV	OR51F1:NM_001004752:exon1:c.T840C:p.N280N	exonic	ENSG00000188069	NA	synonymous SNV	ENSG00000188069:ENST00000343430:exon1:c.T840C:p.N280N,ENSG00000188069:ENST00000380383:exon1:c.T861C:p.N287N	NA	NA	11p15.4	NA	NA	NA	NA	rs1030725	0.23	0.23	0.236	0.215655	0.2704	NA	0.2017	0.4569	0.0654	0.25	NA	0.23	0.46	0.2185	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.120512	NA	NA	0.253374	0.44707	NA	0.29	NA	4.9243926
1160	1	21573722	21573722	G	A	exonic	ECE1	NA	synonymous SNV	ECE1:NM_001113347:exon7:c.C1119T:p.T373T,ECE1:NM_001113349:exon8:c.C1146T:p.T382T,ECE1:NM_001113348:exon9:c.C1107T:p.T369T,ECE1:NM_001397:exon9:c.C1155T:p.T385T	exonic	ENSG00000117298	NA	synonymous SNV	ENSG00000117298:ENST00000357071:exon7:c.C1119T:p.T373T,ENSG00000117298:ENST00000264205:exon8:c.C1146T:p.T382T,ENSG00000117298:ENST00000374893:exon9:c.C1155T:p.T385T,ENSG00000117298:ENST00000415912:exon9:c.C1107T:p.T369T,ENSG00000117298:ENST00000436918:exon9:c.C1155T:p.T385T	NA	NA	1p36.12	NA	NA	NA	NA	rs2229450	0.16	0.16	0.145	0.146765	0.2535	0.128	0.2709	0.0144	0.1472	0.25	0.12	0.25	0.02	0.2204	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.119291	NA	NA	0.268488	0.057422	NA	0.123	NA	4.9242786
1160	1	119988422	119988422	C	T	intergenic	HSD3B2,HSD3B1	dist=22760;dist=61404	NA	NA	ncRNA_exonic	ENSG00000203858	NA	NA	NA	Score=278;Name=lod=18	NA	1p12	NA	NA	NA	NA	rs11805965	0.14	0.14	0.138	0.160343	0.0765	0.0635	0.1513	0.3169	0.1411	0.07	0.05	0.16	0.32	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.110358	NA	NA	NA	NA	NA	0.203	NA	4.9235
1160	2	233310094	233310094	C	T	intergenic	ALPPL2,ALPI	dist=34670;dist=10739	NA	NA	ncRNA_exonic	ENSG00000223788	NA	NA	NA	Score=446;Name=lod=87	NA	2q37.1	NA	NA	NA	NA	rs2853407	0.12	0.12	0.098	0.100439	0.0765	0.2014	0.0634	0.0825	0.0716	0.08	0.2	0.07	0.1	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.239075	NA	NA	NA	NA	NA	0.094	NA	4.9235
1160	14	22032076	22032076	C	T	intergenic	SALL2,OR10G3	dist=26739;dist=5858	NA	NA	ncRNA_exonic	ENSG00000256737	NA	NA	NA	Score=841;Name=lod=3499	NA	14q11.2	NA	NA	NA	NA	rs11628102	0.12	0.12	0.119	0.119808	0.0765	0.12	0.0793	0.1906	0.0971	0.08	0.12	0.08	0.2	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.558121	NA	NA	NA	NA	NA	0.065	NA	4.9235
1160	19	11891003	11891003	G	A	exonic	ZNF441	NA	nonsynonymous SNV	ZNF441:NM_152355:exon4:c.G364A:p.V122I	exonic	ENSG00000197044	NA	nonsynonymous SNV	ENSG00000197044:ENST00000357901:exon4:c.G364A:p.V122I,ENSG00000197044:ENST00000454339:exon5:c.G163A:p.V55I	NA	NA	19p13.2	NA	NA	NA	NA	rs799193	0.88	0.88	0.898	0.89377	0.7903	0.9514	0.8588	0.969	0.864	0.79	0.95	0.84	0.96	0.8304	0.96	0.08	T	0.0	B	0.0	B	.	.	1.000	P	-0.235	N	3.52	T	-1.084	T	0.000	T	0.011	-0.653	1.13	0.166	-0.474	-0.300	4.270	-0.652644	NA	0.75	0.789651	0.94621	NA	0.833	NA	4.9229824
1160	11	4790758	4790758	G	A	exonic	OR51F1	NA	synonymous SNV	OR51F1:NM_001004752:exon1:c.C390T:p.D130D	exonic	ENSG00000188069	NA	synonymous SNV	ENSG00000188069:ENST00000343430:exon1:c.C390T:p.D130D,ENSG00000188069:ENST00000380383:exon1:c.C411T:p.D137D	NA	NA	11p15.4	NA	NA	NA	NA	rs11033796	0.24	0.24	0.257	0.233027	0.2714	NA	0.2104	0.5174	0.0654	0.25	0.0017	0.23	0.53	0.2185	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.050917	NA	NA	0.253955	0.488642	NA	0.304	NA	4.9228116
1160	2	107314737	107314737	T	C	intergenic	RGPD3,ST6GAL2	dist=229936;dist=103319	NA	NA	ncRNA_exonic	ENSG00000214199	NA	NA	NA	Score=869;Name=lod=4546	NA	2q12.2	NA	NA	NA	NA	rs10176126	0.08	0.08	0.048	0.0734824	0.0775	0.0377	0.0821	0.0908	0.0767	0.08	0.03	0.09	0.11	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.392759	NA	NA	NA	NA	NA	0.094	NA	4.9225
1160	2	107314806	107314806	A	G	intergenic	RGPD3,ST6GAL2	dist=230005;dist=103250	NA	NA	ncRNA_exonic	ENSG00000214199	NA	NA	NA	Score=869;Name=lod=4546	NA	2q12.2	NA	NA	NA	NA	rs142445925	0.08	0.08	0.052	0.0730831	0.0775	0.0377	0.0821	0.0893	0.0767	0.08	0.03	0.09	0.11	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.985182	NA	NA	NA	NA	NA	0.072	NA	4.9225
1160	2	112751737	112751737	G	A	intronic	MERTK	NA	NA	NA	intronic	ENSG00000153208	NA	NA	NA	NA	NA	2q13	NA	Name=PU.1	NA	NA	rs77739234	0.03	0.03	0.025	0.0227636	0.0775	NA	0.036	0.003	0.0072	0.07	NA	0.04	0.01	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.59063	NA	NA	NA	NA	NA	0.029	NA	4.9225
1160	3	44751372	44751372	C	T	intergenic	ZNF35,ZNF502	dist=49089;dist=2763	NA	NA	ncRNA_exonic	ENSG00000235805	NA	NA	NA	Score=777;Name=lod=1920	NA	3p21.31	NA	NA	NA	NA	rs116419768	0.04	0.04	0.032	0.0221645	0.0775	NA	0.0331	0.003	0.0061	0.08	NA	0.04	0.0041	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.556554	NA	NA	NA	NA	NA	0.043	NA	4.9225
1160	3	44751661	44751661	C	T	intergenic	ZNF35,ZNF502	dist=49378;dist=2474	NA	NA	ncRNA_exonic	ENSG00000235805	NA	NA	NA	Score=722;Name=lod=1149	NA	3p21.31	NA	NA	NA	NA	rs143370041	0.04	0.04	0.027	0.0221645	0.0775	NA	0.0331	0.003	0.0061	0.08	NA	0.04	0.0041	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.495305	NA	NA	NA	NA	NA	0.043	NA	4.9225
1160	4	117520126	117520126	C	G	intergenic	MIR1973,TRAM1L1	dist=299202;dist=484584	NA	NA	ncRNA_exonic	ENSG00000213493	NA	NA	NA	Score=711;Name=lod=1031	NA	4q26	NA	NA	NA	NA	rs17589419	0.04	0.04	0.037	0.0263578	0.0775	NA	0.0447	0.0015	0.0215	0.08	NA	0.04	0.002	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.27694	NA	NA	NA	NA	NA	0.029	NA	4.9225
1160	5	157413836	157413836	G	C	intergenic	CLINT1,EBF1	dist=127653;dist=709087	NA	NA	ncRNA_exonic	ENSG00000213414	NA	NA	NA	Score=449;Name=lod=89	NA	5q33.3	NA	NA	NA	NA	rs72816535	0.1	0.1	0.103	0.086861	0.0775	NA	0.0562	0.2337	0.0092	0.09	NA	0.06	0.27	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.119759	NA	NA	NA	NA	NA	0.087	NA	4.9225
1160	5	157414091	157414091	C	T	intergenic	CLINT1,EBF1	dist=127908;dist=708832	NA	NA	ncRNA_exonic	ENSG00000213414	NA	NA	NA	Score=639;Name=lod=529	NA	5q33.3	NA	NA	NA	NA	rs11953808	0.11	0.11	0.121	0.0986422	0.0775	NA	0.0591	0.2769	0.0092	0.09	NA	0.06	0.3	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.778051	NA	NA	NA	NA	NA	0.123	NA	4.9225
1160	18	33854102	33854102	A	C	intergenic	MOCOS,FHOD3	dist=5417;dist=23600	NA	NA	ncRNA_exonic	ENSG00000267404	NA	NA	NA	Score=778;Name=lod=1936	NA	18q12.2	NA	NA	NA	NA	rs12457919	0.08	0.08	0.059	0.0728834	0.0775	0.0714	0.1772	0.0378	0.0429	0.07	0.07	0.17	0.03	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.839298	NA	NA	NA	NA	NA	0.051	NA	4.9225
1160	5	101631790	101631790	T	G	exonic	SLCO4C1	NA	synonymous SNV	SLCO4C1:NM_180991:exon1:c.A177C:p.P59P	exonic	ENSG00000173930	NA	synonymous SNV	ENSG00000173930:ENST00000310954:exon1:c.A177C:p.P59P	NA	NA	5q21.1	NA	NA	NA	NA	rs10479190	0.17	0.17	0.122	0.141973	0.2833	0.1558	0.1398	0.0121	0.1595	0.28	0.15	0.16	0.02	0.2181	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.17656	NA	NA	0.243721	0.047435	NA	0.225	NA	4.9215456
1160	7	94325030	94325030	T	G	intergenic	PEG10,PPP1R9A	dist=26024;dist=211919	NA	NA	ncRNA_exonic	ENSG00000232385	NA	NA	NA	Score=804;Name=lod=2468	NA	7q21.3	NA	NA	NA	NA	rs62466571	0.12	0.12	0.116	0.149561	0.0785	0.1855	0.0461	0.2602	0.1094	0.08	0.14	0.05	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.786032	2.786032	NA	NA	NA	NA	0.138	NA	4.9215
1160	17	27445576	27445576	C	T	intronic	MYO18A	NA	NA	NA	intronic	ENSG00000196535	NA	NA	NA	NA	NA	17q11.2	NA	NA	Name=2	NA	rs55776954	0.03	0.03	0.02	0.0241613	0.0785	NA	0.0476	0.003	0.0051	0.07	NA	0.05	0.01	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.24474	NA	NA	NA	NA	NA	0.007	NA	4.9215
1160	17	76128360	76128360	G	A	intronic	TMC6,TMC8	NA	NA	NA	intronic	ENSG00000141524,ENSG00000167895	NA	NA	NA	NA	NA	17q25.3	NA	Name=CTCF_(C-20),Pol2,CTCF	NA	NA	rs2221636	0.1	0.1	0.077	0.0884585	0.0785	0.0883	0.0648	0.1346	0.0532	0.07	0.1	0.08	0.15	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.330463	NA	NA	NA	NA	NA	0.014	NA	4.9215
1160	20	23565975	23565975	C	T	intergenic	CST9L,CST9	dist=16589;dist=17072	NA	NA	ncRNA_intronic	ENSG00000204658	NA	NA	NA	NA	NA	20p11.21	NA	NA	Name=8	NA	rs77114334	0.04	0.04	0.036	0.0247604	0.0785	NA	0.0519	0.0015	0.0072	0.08	NA	0.06	NA	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.618643	NA	NA	NA	NA	NA	0.007	NA	4.9215
1160	5	55455600	55455600	C	T	intronic	ANKRD55	NA	NA	NA	intronic	ENSG00000164512	NA	NA	NA	NA	NA	5q11.2	NA	NA	Name=35	NA	rs115250350	0.02	0.02	0.016	0.0129792	0.0408	NA	0.0173	0.0008	0.0112	0.04	NA	0.02	0.002	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.468101	NA	NA	0.037712	0.007225	NA	NA	NA	4.921488
1160	1	211836789	211836789	T	C	exonic	NEK2	NA	synonymous SNV	NEK2:NM_002497:exon8:c.A1317G:p.R439R	exonic	ENSG00000117650	NA	synonymous SNV	ENSG00000117650:ENST00000366999:exon8:c.A1317G:p.R439R,ENSG00000117650:ENST00000540251:exon9:c.A1188G:p.R396R	NA	NA	1q32.3	NA	NA	NA	NA	rs12031285	0.28	0.28	0.25	0.309505	0.2286	0.2629	0.3501	0.3782	0.319	0.23	0.27	0.32	0.34	0.2871	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.370169	1.370169	NA	0.229767	0.360872	NA	0.275	NA	4.9211996
1160	4	25419283	25419283	T	C	exonic	ANAPC4	NA	synonymous SNV	ANAPC4:NM_013367:exon28:c.T2121C:p.F707F	exonic	ENSG00000053900	NA	synonymous SNV	ENSG00000053900:ENST00000315368:exon28:c.T2121C:p.F707F,ENSG00000053900:ENST00000510092:exon28:c.T2124C:p.F708F	Score=580;Name=lod=304	NA	4p15.2	NA	NA	NA	NA	rs9174	0.51	0.51	0.495	0.502396	0.5974	0.3075	0.5476	0.6172	0.4182	0.59	0.31	0.55	0.59	0.554	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.789155	NA	NA	0.594186	0.617794	ID=COSM149658;OCCURENCE=1(stomach)	0.514	NA	4.9210806
1160	1	173516903	173516903	A	G	exonic	SLC9C2	NA	synonymous SNV	SLC9C2:NM_178527:exon13:c.T1482C:p.N494N	exonic	ENSG00000162753	NA	synonymous SNV	ENSG00000162753:ENST00000536496:exon12:c.T1176C:p.N392N,ENSG00000162753:ENST00000367714:exon13:c.T1482C:p.N494N	NA	NA	1q25.1	NA	NA	NA	NA	rs10494490	0.45	0.45	0.442	0.485224	0.2147	0.6448	0.3732	0.671	0.4274	0.22	0.62	0.36	0.69	0.322	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.379096	NA	NA	0.208953	0.591693	NA	0.435	NA	4.9210136
1160	7	11521542	11521542	T	C	exonic	THSD7A	NA	synonymous SNV	THSD7A:NM_015204:exon7:c.A1890G:p.P630P	exonic	ENSG00000005108	NA	synonymous SNV	ENSG00000005108:ENST00000423059:exon7:c.A1890G:p.P630P	NA	NA	7p21.3	NA	NA	NA	NA	rs3735502	0.2	0.2	0.211	0.184904	0.2505	0.1786	0.183	0.1188	0.2147	0.24	0.17	0.19	0.19	0.233	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.048013	NA	NA	0.262237	0.114469	NA	0.275	NA	4.9209296
1160	5	80042275	80042275	T	G	intronic	MSH3	NA	NA	NA	ncRNA_exonic	ENSG00000248967	NA	NA	NA	Score=719;Name=lod=1110	NA	5q14.1	NA	NA	NA	NA	rs863221	0.34	0.34	0.317	0.332069	0.4125	0.3661	0.3559	0.1589	0.4315	0.42	0.36	0.35	0.18	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.675941	NA	NA	NA	NA	NA	0.428	NA	4.9208333
1160	5	177636199	177636199	C	T	intronic	AGXT2L2,HNRNPAB	NA	NA	NA	intronic	ENSG00000175309,ENSG00000197451	NA	NA	NA	NA	NA	5q35.3	NA	NA	Name=3	NA	rs1059367	0.1	0.1	0.078	0.0834665	0.0795	0.1746	0.1297	0.0061	0.0654	0.08	0.19	0.1	0.01	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.074349	NA	NA	NA	NA	NA	0.007	NA	4.9205
1160	7	108634409	108634409	G	C	intergenic	C7orf66,EIF3IP1	dist=109772;dist=964875	NA	NA	ncRNA_exonic	ENSG00000227968	NA	NA	NA	Score=692;Name=lod=862	NA	7q31.1	NA	NA	NA	NA	rs13233585	0.04	0.04	0.034	0.0231629	0.0795	NA	0.0389	0.003	0.0051	0.1	NA	0.05	0.01	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.070532	NA	NA	NA	NA	NA	0.08	NA	4.9205
1160	11	10506297	10506297	C	T	intronic	AMPD3	NA	NA	NA	intronic	ENSG00000133805	NA	NA	NA	NA	NA	11p15.4	NA	Name=MafK_(ab50322),MafF_(M8194),MafK_(SC-477)	NA	NA	rs11042843	0.04	0.04	0.03	0.023762	0.0795	NA	0.0346	0.003	0.0112	0.08	NA	0.04	0.01	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.634129	NA	NA	NA	NA	NA	0.014	NA	4.9205
1160	18	14392976	14392976	C	T	intergenic	CYP4F35P,CXADRP3	dist=50453;dist=84978	NA	NA	ncRNA_exonic	ENSG00000265296	NA	NA	NA	Score=554;Name=lod=239	NA	18p11.21	NA	NA	NA	NA	rs141934628	0.04	0.04	0.029	0.0405351	0.0795	0.006	0.0447	0.0091	0.0757	0.07	0.0017	0.04	0.01	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.04593	NA	NA	NA	NA	NA	NA	NA	4.9205
1160	22	50152008	50152008	C	T	intergenic	C22orf34,BRD1	dist=100818;dist=14929	NA	NA	ncRNA_exonic	ENSG00000214727	NA	NA	NA	Score=772;Name=lod=1826	NA	22q13.33	NA	NA	NA	NA	rs139835	0.07	0.07	0.055	0.057508	0.0795	0.0595	0.0663	0.0045	0.0982	0.09	0.07	0.08	0.0041	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.138751	NA	NA	NA	NA	NA	0.043	NA	4.9205
1160	22	50152229	50152229	T	C	intergenic	C22orf34,BRD1	dist=101039;dist=14708	NA	NA	ncRNA_exonic	ENSG00000214727	NA	NA	NA	Score=772;Name=lod=1826	NA	22q13.33	NA	NA	NA	NA	rs139836	0.07	0.07	0.051	0.0579073	0.0795	0.0595	0.0663	0.0045	0.1002	0.09	0.07	0.08	0.0041	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.061745	NA	NA	NA	NA	NA	0.043	NA	4.9205
1160	17	66526316	66526316	A	T	intronic	PRKAR1A	NA	NA	NA	UTR3	ENSG00000108946	ENST00000592800:c.*97A>T	NA	NA	NA	NA	17q24.2	NA	NA	NA	NA	rs2302233	0.19	0.19	0.186	0.179712	0.2465	0.1637	0.1484	0.1377	0.2065	0.25	0.18	0.14	0.14	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.614051	NA	NA	NA	NA	NA	0.116	CLINSIG=non-pathogenic;CLNDBN=Carney_complex\x2c_type_1;CLNREVSTAT=single;CLNACC=RCV000033948.2;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet;CLNDSDBID=NBK1286:C2607929:160980:ORPHA1359	4.9201667
1160	6	24599246	24599246	C	A	intronic	KIAA0319	NA	NA	NA	ncRNA_exonic	ENSG00000218186	NA	NA	NA	Score=666;Name=lod=676	NA	6p22.3	NA	NA	NA	NA	rs13218075	0.23	0.23	0.202	0.202875	0.4135	0.1171	0.2161	0.0318	0.2965	0.44	0.13	0.21	0.04	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.24153	NA	NA	NA	NA	NA	0.319	NA	4.9198333
1160	15	89430506	89430506	C	T	exonic	HAPLN3	NA	synonymous SNV	HAPLN3:NM_178232:exon2:c.G24A:p.P8P	exonic	ENSG00000140511	NA	synonymous SNV	ENSG00000140511:ENST00000359595:exon2:c.G24A:p.P8P,ENSG00000140511:ENST00000558770:exon2:c.G24A:p.P8P,ENSG00000140511:ENST00000562281:exon2:c.G24A:p.P8P,ENSG00000140511:ENST00000562889:exon3:c.G210A:p.P70P	NA	NA	15q26.1	NA	NA	NA	NA	rs3743395	0.22	0.22	0.213	0.203674	0.2505	0.2222	0.2248	0.1755	0.1595	0.25	0.22	0.23	0.17	0.2329	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.041129	NA	NA	0.263666	0.185227	NA	0.275	NA	4.9196006
1160	4	43901148	43901148	A	G	intergenic	GRXCR1,KCTD8	dist=868473;dist=274772	NA	NA	ncRNA_exonic	ENSG00000124399	NA	NA	NA	Score=321;Name=lod=27	NA	4p13	NA	NA	NA	NA	rs10022054	0.23	0.23	0.207	0.252995	0.0805	0.1944	0.2478	0.4743	0.1953	0.08	0.2	0.25	0.45	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.215465	NA	0.91	NA	NA	NA	0.196	NA	4.9195
1160	7	130528405	130528405	T	G	intergenic	KLF14,MIR29A	dist=109517;dist=33101	NA	NA	ncRNA_exonic	ENSG00000232716	NA	NA	NA	Score=563;Name=lod=258	NA	7q32.3	NA	NA	NA	NA	rs77239427	0.04	0.04	0.035	0.0335463	0.0805	0.0218	0.0476	0.0038	0.0276	0.08	0.02	0.06	0.01	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.430096	NA	NA	NA	NA	NA	0.036	NA	4.9195
1160	19	57802806	57802806	C	T	exonic	ZNF460	NA	synonymous SNV	ZNF460:NM_006635:exon3:c.C897T:p.N299N	exonic	ENSG00000197714	NA	synonymous SNV	ENSG00000197714:ENST00000360338:exon3:c.C897T:p.N299N,ENSG00000197714:ENST00000537645:exon3:c.C774T:p.N258N	NA	NA	19q13.43	NA	NA	NA	NA	rs2041109	0.2	0.2	0.162	0.184305	0.2515	0.1657	0.3084	0.0908	0.1728	0.25	0.16	0.28	0.09	0.2404	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.635845	NA	NA	0.255698	0.11212	NA	0.152	NA	4.9190686
1160	17	48752866	48752866	C	T	intronic	ABCC3	NA	NA	NA	intronic	ENSG00000108846	NA	NA	NA	NA	NA	17q21.33	NA	Name=GATA2_(CG2-96)	Name=3	NA	rs2072365	0.33	0.33	0.313	0.32488	0.3459	0.3611	0.4207	0.1157	0.4806	0.35	0.39	0.4	0.16	0.3698	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.842367	NA	NA	0.365581	0.167953	NA	0.29	NA	4.918719
1160	7	76990178	76990178	C	G	exonic	GSAP	NA	synonymous SNV	GSAP:NM_017439:exon14:c.G990C:p.G330G	exonic	ENSG00000186088	NA	synonymous SNV	ENSG00000186088:ENST00000257626:exon14:c.G990C:p.G330G	NA	NA	7q11.23	NA	NA	NA	NA	rs4727366	0.28	0.28	0.288	0.301917	0.2326	0.0873	0.219	0.5461	0.3231	0.24	0.09	0.25	0.58	0.2626	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.039754	NA	NA	0.252791	0.495915	ID=COSM1452148;OCCURENCE=1(large_intestine)	0.283	NA	4.9186756
1160	10	30692387	30692387	C	G	intergenic	MTPAP,MAP3K8	dist=54120;dist=30563	NA	NA	ncRNA_exonic	ENSG00000224473	NA	NA	NA	Score=582;Name=lod=309	NA	10p11.23	NA	NA	NA	NA	rs11008032	0.1	0.1	0.078	0.096845	0.0815	0.1746	0.1326	0.0212	0.1094	0.08	0.19	0.13	0.01	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.324859	NA	NA	NA	NA	NA	0.087	NA	4.9185
1160	18	43524145	43524145	C	A	intronic	EPG5	NA	NA	NA	intronic	ENSG00000152223	NA	NA	NA	NA	NA	18q21.1	NA	Name=MafK_(SC-477),MafK_(ab50322)	NA	NA	rs75005183	0.08	0.08	0.089	0.0988419	0.0815	0.0268	0.0692	0.1952	0.0818	0.08	0.02	0.06	0.18	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.275989	NA	NA	NA	NA	NA	0.087	NA	4.9185
1160	19	57802824	57802824	G	A	exonic	ZNF460	NA	synonymous SNV	ZNF460:NM_006635:exon3:c.G915A:p.K305K	exonic	ENSG00000197714	NA	synonymous SNV	ENSG00000197714:ENST00000360338:exon3:c.G915A:p.K305K,ENSG00000197714:ENST00000537645:exon3:c.G792A:p.K264K	NA	NA	19q13.43	NA	NA	NA	NA	rs2041110	0.2	0.2	0.161	0.186302	0.2515	0.1657	0.3084	0.0983	0.1728	0.25	0.16	0.28	0.09	0.2413	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.55085	NA	NA	0.255465	0.121198	NA	0.152	NA	4.9184016
1160	9	29825106	29825106	C	T	intergenic	LINGO2,LOC401497	dist=612108;dist=563827	NA	NA	ncRNA_exonic	ENSG00000230097	NA	NA	NA	Score=563;Name=lod=260	NA	9p21.1	NA	NA	NA	NA	rs10813176	0.13	0.13	0.166	0.148762	0.0825	0.0427	0.0879	0.3669	0.0746	0.08	0.06	0.07	0.34	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.745365	NA	NA	NA	NA	NA	0.167	NA	4.9175
1160	10	67008283	67008283	G	A	intergenic	ANXA2P3,CTNNA3	dist=421649;dist=671442	NA	NA	ncRNA_exonic	ENSG00000233724	NA	NA	NA	Score=485;Name=lod=125	NA	10q21.3	NA	NA	NA	NA	rs67962230	0.1	0.1	0.09	0.096845	0.0825	0.1111	0.1297	0.0719	0.1074	0.09	0.13	0.14	0.06	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.567708	NA	NA	NA	NA	NA	0.101	NA	4.9175
1160	10	115964736	115964736	A	G	intronic	TDRD1	NA	NA	NA	intronic	ENSG00000095627	NA	NA	NA	Score=251;Name=lod=14	NA	10q25.3	NA	NA	NA	NA	rs74613308	0.07	0.07	0.068	0.0565096	0.0825	0.0585	0.0965	0.0371	0.0256	0.08	0.06	0.1	0.06	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.732985	1.732985	NA	NA	NA	NA	0.036	NA	4.9175
1160	11	71380740	71380740	C	G	intergenic	KRTAP5-11,FAM86C1	dist=86819;dist=117817	NA	NA	ncRNA_exonic	ENSG00000239481	NA	NA	NA	Score=784;Name=lod=2055	NA	11q13.4	NA	NA	NA	NA	rs139215351	0.08	0.08	0.046	0.091853	0.0825	0.1359	0.0548	0.0053	0.1994	0.08	0.17	0.06	0.01	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.343134	NA	NA	NA	NA	NA	NA	NA	4.9175
1160	19	57931553	57931553	C	T	exonic	ZNF17	NA	synonymous SNV	ZNF17:NM_006959:exon3:c.C693T:p.S231S	exonic	ENSG00000186272	NA	synonymous SNV	ENSG00000186272:ENST00000601808:exon3:c.C693T:p.S231S,ENSG00000186272:ENST00000307658:exon4:c.C699T:p.S233S	NA	NA	19q13.43	NA	NA	NA	NA	rs10417533	0.22	0.22	0.213	0.226238	0.2694	0.0794	0.2176	0.3449	0.1789	0.26	0.08	0.22	0.31	0.228	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.541114	NA	NA	0.252501	0.296953	NA	0.167	NA	4.9167656
1160	1	51753812	51753812	G	A	UTR3	TTC39A	NM_001080494:c.*17C>T,NM_001144832:c.*17C>T	NA	NA	UTR3	ENSG00000085831	ENST00000413473:c.*17C>T,ENST00000447632:c.*17C>T,ENST00000530004:c.*17C>T,ENST00000451380:c.*17C>T,ENST00000262675:c.*17C>T,ENST00000371750:c.*17C>T	NA	NA	NA	NA	1p32.3	NA	NA	Name=2	NA	rs635590	0.1	0.1	0.072	0.119209	0.1262	0.0863	0.0879	0.0076	0.319	0.12	0.1	0.14	0.03	0.1512	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.40227	NA	NA	0.139432	0.032115	NA	0.072	NA	4.9165014
1160	13	103343428	103343428	A	G	intronic	METTL21C	NA	NA	NA	intronic	ENSG00000139780	NA	NA	NA	NA	NA	13q33.1	NA	Name=GATA-2	NA	NA	rs9518810	0.14	0.14	0.124	0.123602	0.0835	0.2024	0.2291	0.0719	0.0787	0.08	0.22	0.21	0.08	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.007738	NA	NA	NA	NA	NA	0.109	NA	4.9165
1160	22	42546304	42546304	G	A	intergenic	CYP2D7P1,TCF20	dist=5729;dist=9715	NA	NA	ncRNA_intronic	ENSG00000226450	NA	NA	NA	Score=389;Name=lod=51	NA	22q13.2	NA	NA	NA	NA	rs12167368	0.07	0.07	0.066	0.0830671	0.0835	0.0298	0.0605	0.1203	0.1033	0.08	0.02	0.07	0.12	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.351301	NA	NA	NA	NA	NA	0.145	NA	4.9165
1160	12	72355504	72355504	A	G	intronic	TPH2	NA	NA	NA	intronic	ENSG00000139287	NA	NA	NA	Score=374;Name=lod=44	NA	12q21.1	NA	NA	NA	NA	rs76143560	0.01	0.01	0.012	0.0091853	0.0278	NA	0.0216	0.0008	0.002	0.03	NA	0.02	NA	0.0244	0.032	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.642281	NA	NA	0.032161	0.003425	NA	NA	NA	4.915639
1160	13	24696665	24696665	T	C	intergenic	ANKRD20A19P,SPATA13	dist=173211;dist=38196	NA	NA	ncRNA_exonic	ENSG00000225674	NA	NA	NA	Score=726;Name=lod=1194	NA	13q12.12	NA	NA	NA	NA	rs4770592	0.24	0.24	0.232	0.249601	0.0845	0.3938	0.1902	0.3336	0.1994	0.09	0.39	0.18	0.36	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.656846	NA	NA	NA	NA	NA	0.138	NA	4.9155
1160	13	24696684	24696684	G	A	intergenic	ANKRD20A19P,SPATA13	dist=173230;dist=38177	NA	NA	ncRNA_exonic	ENSG00000225674	NA	NA	NA	Score=726;Name=lod=1194	NA	13q12.12	NA	NA	NA	NA	rs4770593	0.24	0.24	0.232	0.250599	0.0845	0.3938	0.1902	0.3374	0.1994	0.09	0.39	0.18	0.37	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.539118	NA	NA	NA	NA	NA	0.145	NA	4.9155
1160	22	22780596	22780596	G	A	intergenic	LOC96610,ZNF280B	dist=103272;dist=58176	NA	NA	ncRNA_exonic	ENSG00000253889	NA	NA	NA	NA	NA	22q11.22	NA	Name=p300,HEY1	NA	NA	rs4822015	0.15	0.15	0.125	0.164337	0.0845	0.3115	0.3199	0.0061	0.1984	0.08	0.29	0.24	0.01	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.125619	NA	NA	NA	NA	NA	0.087	NA	4.9155
1160	9	100204202	100204202	C	G	intronic	TDRD7	NA	NA	NA	intronic	ENSG00000196116	NA	NA	NA	NA	NA	9q22.33	NA	NA	Name=18	NA	rs17332899	0.02	0.02	0.011	0.0197684	0.0308	0.001	0.013	0.0174	0.0358	0.04	0.0017	0.01	0.01	0.0251	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.668976	2.668976	NA	0.028754	0.010899	NA	0.007	NA	4.915346
1160	10	129900858	129900858	C	T	exonic	MKI67	NA	synonymous SNV	MKI67:NM_001145966:exon12:c.G8166A:p.S2722S,MKI67:NM_002417:exon13:c.G9246A:p.S3082S	exonic	ENSG00000148773	NA	synonymous SNV	ENSG00000148773:ENST00000368653:exon12:c.G8166A:p.S2722S,ENSG00000148773:ENST00000368654:exon13:c.G9246A:p.S3082S	NA	NA	10q26.2	NA	NA	NA	NA	rs3191122	0.2	0.2	0.185	0.178115	0.2684	0.121	0.3112	0.0711	0.1943	0.27	0.15	0.33	0.05	0.2356	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.413918	NA	NA	0.247558	0.08897	ID=COSM147091;OCCURENCE=1(stomach)	0.145	NA	4.9151086
1161	2	170515236	170515236	T	G	intronic	CCDC173	NA	NA	NA	ncRNA_exonic	ENSG00000226072	NA	NA	NA	Score=505;Name=lod=151	NA	2q31.1	NA	NA	NA	NA	rs1446902	0.32	0.32	0.313	0.310903	0.4185	0.2093	0.2695	0.2905	0.362	0.42	0.19	0.31	0.3	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.961852	NA	NA	NA	NA	NA	0.377	NA	4.9148333
1161	12	102506044	102506044	T	C	intronic	NUP37	NA	NA	NA	intronic	ENSG00000075188	NA	NA	NA	NA	NA	12q23.2	Score=909;Name=V$FOXJ2_01	NA	NA	NA	rs2271266	0.1	0.1	0.075	0.0970447	0.0129	0.3026	0.1398	NA	0.0726	0.02	0.3	0.12	NA	0.0611	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.144947	NA	NA	0.011395	0.008856	NA	0.036	NA	4.914605
1161	1	159860488	159860488	A	G	intronic	CCDC19	NA	NA	NA	intronic	ENSG00000213085	NA	NA	NA	NA	NA	1q23.2	NA	Name=ELF1_(SC-631),E2F6_(H-50),TAL1_(SC-12984)	NA	NA	rs3820100	0.13	0.13	0.136	0.131789	0.0855	0.0556	0.0807	0.3011	0.0654	0.09	0.09	0.08	0.3	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.655966	NA	NA	NA	NA	NA	0.232	NA	4.9145
1161	17	16520610	16520610	G	A	intergenic	ZNF287,ZNF624	dist=48090;dist=3438	NA	NA	ncRNA_exonic	ENSG00000235554	NA	NA	NA	Score=693;Name=lod=875	NA	17p11.2	NA	NA	NA	NA	rs62072856	0.05	0.05	0.04	0.0369409	0.0855	NA	0.0476	0.0348	0.0204	0.08	NA	0.05	0.06	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.449576	1.449576	NA	NA	NA	NA	0.022	NA	4.9145
1161	2	170517529	170517529	C	A	intronic	CCDC173	NA	NA	NA	ncRNA_exonic	ENSG00000226072	NA	NA	NA	Score=606;Name=lod=387	NA	2q31.1	NA	NA	NA	NA	rs7575371	0.35	0.35	0.34	0.349641	0.4195	0.2093	0.281	0.4304	0.362	0.42	0.19	0.33	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.051125	NA	NA	NA	NA	NA	0.42	NA	4.9138333
1161	10	97964157	97964157	A	G	intronic	BLNK	NA	NA	NA	ncRNA_exonic	ENSG00000177853	NA	NA	NA	NA	NA	10q24.1	NA	NA	Name=4	NA	rs2242137	0.4	0.4	0.398	0.383986	0.4195	0.3304	0.4424	0.3964	0.3446	0.41	0.38	0.46	0.38	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.532869	NA	NA	NA	NA	NA	0.297	NA	4.9138333
1161	2	29001691	29001691	A	G	exonic	PPP1CB	NA	synonymous SNV	PPP1CB:NM_002709:exon3:c.A201G:p.Q67Q,PPP1CB:NM_206876:exon4:c.A201G:p.Q67Q	exonic	ENSG00000213639	NA	synonymous SNV	ENSG00000213639:ENST00000395366:exon3:c.A201G:p.Q67Q,ENSG00000213639:ENST00000455580:exon3:c.A117G:p.Q39Q,ENSG00000213639:ENST00000296122:exon4:c.A201G:p.Q67Q,ENSG00000213639:ENST00000358506:exon4:c.A201G:p.Q67Q,ENSG00000213639:ENST00000420282:exon4:c.A201G:p.Q67Q,ENSG00000213639:ENST00000441461:exon4:c.A201G:p.Q67Q	Score=774;Name=lod=1856	NA	2p23.2	NA	NA	NA	NA	rs1128416	0.48	0.48	0.486	0.495407	0.6064	0.2153	0.4395	0.5764	0.6002	0.59	0.24	0.48	0.57	0.5447	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.63481	NA	NA	0.601768	0.581971	NA	0.42	NA	4.9137986
1161	12	100732327	100732327	C	T	exonic	SCYL2	NA	synonymous SNV	SCYL2:NM_017988:exon18:c.C2167T:p.L723L	exonic	ENSG00000136021	NA	synonymous SNV	ENSG00000136021:ENST00000360820:exon18:c.C2167T:p.L723L	NA	NA	12q23.1	NA	NA	NA	NA	rs10860580	0.23	0.23	0.223	0.236422	0.2674	0.0585	0.1945	0.3933	0.2055	0.26	0.05	0.2	0.41	0.2272	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.424526	NA	NA	0.258372	0.354063	NA	0.239	NA	4.9136946
1161	1	17586010	17586010	G	A	intronic	PADI3	NA	NA	NA	intronic	ENSG00000142619	NA	NA	NA	NA	NA	1p36.13	NA	Name=AP-2alpha,AP-2gamma,TCF4,CTCF	NA	NA	rs45438395	0.1	0.1	0.084	0.121006	0.0865	0.1558	0.1326	0.0325	0.2321	0.08	0.15	0.14	0.04	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.033742	NA	NA	NA	NA	NA	0.08	NA	4.9135
1161	19	35024369	35024369	G	A	intergenic	WTIP,SCGB1B2P	dist=32284;dist=43269	NA	NA	ncRNA_exonic	ENSG00000239210	NA	NA	NA	Score=635;Name=lod=510	NA	19q13.11	NA	NA	NA	NA	rs67962295	0.13	0.13	0.132	0.140176	0.0865	0.0982	0.0663	0.3253	0.0409	0.09	0.05	0.07	0.31	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.863255	NA	NA	NA	NA	NA	0.138	NA	4.9135
1161	1	150241230	150241230	G	T	UTR5	APH1A	NM_001077628:c.-20C>A,NM_016022:c.-20C>A,NM_001243772:c.-20C>A,NM_001243771:c.-20C>A	NA	NA	UTR5	ENSG00000117362	ENST00000369109:c.-20C>A,ENST00000360244:c.-20C>A,ENST00000414276:c.-20C>A,ENST00000236017:c.-20C>A	NA	NA	NA	NA	1q21.2	NA	Name=Pol2,TAF1,USF-1,ZBTB7A_(SC-34508),STAT1,HEY1,NFKB	NA	NA	rs2275780	0.16	0.16	0.077	0.150559	0.1372	0.38	0.1153	0.0045	0.1503	0.14	0.34	0.12	0.0041	0.1662	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.104147	NA	NA	0.116838	0.026873	NA	0.058	NA	4.9130954
1161	12	10532326	10532326	T	C	exonic	KLRC4-KLRK1,KLRK1	NA	nonsynonymous SNV	KLRK1:NM_007360:exon4:c.A214G:p.T72A,KLRC4-KLRK1:NM_001199805:exon9:c.A214G:p.T72A	exonic	ENSG00000213809	NA	nonsynonymous SNV	ENSG00000213809:ENST00000540818:exon3:c.A214G:p.T72A,ENSG00000213809:ENST00000240618:exon4:c.A214G:p.T72A,ENSG00000213809:ENST00000396451:exon5:c.A214G:p.T72A	NA	NA	12p13.2	NA	NA	NA	NA	rs2255336	0.76	0.76	0.745	0.76238	0.8171	0.7857	0.8401	0.553	0.91	0.82	0.82	0.81	0.59	0.8036	0.82	0.53	T	0.003	B	0.003	B	0.226	N	1.000	P	.	.	4.91	T	-1.097	T	0.000	T	0.018	2.441	14.12	-1.42	-0.060	-0.809	2.760	2.441146	2.441146	0.16	0.799651	0.57921	ID=COSM430206;OCCURENCE=1(breast)	0.645	NA	4.9129824
1161	17	61986988	61986988	A	G	UTR3	CSHL1	NM_022581:c.*83T>C,NM_022579:c.*83T>C,NM_001318:c.*83T>C,NM_022580:c.*83T>C	NA	NA	UTR3	ENSG00000204414	ENST00000561003:c.*219T>C,ENST00000259003:c.*83T>C,ENST00000438387:c.*83T>C,ENST00000346606:c.*83T>C,ENST00000450719:c.*219T>C	NA	NA	Score=272;Name=lod=17	NA	17q23.3	NA	NA	NA	NA	rs2070680	0.37	0.37	0.323	0.34365	0.4205	0.4216	0.3473	0.2935	0.2495	0.42	0.38	0.39	0.26	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.646623	NA	NA	NA	NA	NA	0.413	NA	4.9128334
1161	5	151229553	151229553	G	A	intronic	GLRA1	NA	NA	NA	ncRNA_exonic	ENSG00000270978	NA	NA	NA	Score=802;Name=lod=2417	NA	5q33.1	NA	NA	NA	NA	rs72802219	0.32	0.32	0.3	0.341653	0.4205	0.3135	0.3473	0.2118	0.4611	0.43	0.3	0.31	0.17	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.384136	NA	NA	NA	NA	NA	0.297	NA	4.9128333
1161	5	151229811	151229811	T	G	intronic	GLRA1	NA	NA	NA	ncRNA_exonic	ENSG00000270978	NA	NA	NA	Score=802;Name=lod=2417	NA	5q33.1	NA	NA	NA	NA	rs12108921	0.44	0.44	0.442	0.475839	0.4205	0.3323	0.4135	0.6589	0.4775	0.43	0.3	0.38	0.64	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.556539	NA	NA	NA	NA	NA	0.457	NA	4.9128333
1161	5	151230091	151230091	A	G	intronic	GLRA1	NA	NA	NA	ncRNA_exonic	ENSG00000270978	NA	NA	NA	Score=802;Name=lod=2417	NA	5q33.1	NA	NA	NA	NA	rs6896141	0.41	0.41	0.401	0.450879	0.4205	0.3304	0.4035	0.5711	0.4775	0.43	0.3	0.37	0.55	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.540498	NA	NA	NA	NA	NA	0.399	NA	4.9128333
1161	5	151230282	151230282	C	T	intronic	GLRA1	NA	NA	NA	ncRNA_exonic	ENSG00000270978	NA	NA	NA	Score=802;Name=lod=2417	NA	5q33.1	NA	NA	NA	NA	rs10078632	0.36	0.36	0.342	0.388379	0.4205	0.3304	0.3703	0.3638	0.4611	0.43	0.3	0.33	0.33	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.377611	NA	NA	NA	NA	NA	0.362	NA	4.9128333
1161	1	3421642	3421642	C	A	intronic	MEGF6	NA	NA	NA	intronic	ENSG00000162591	NA	NA	NA	NA	NA	1p36.32	NA	NA	Name=18	NA	rs4648512	NA	NA	NA	0.0788738	0.0875	0.1052	0.0807	0.0091	0.136	NA	NA	NA	NA	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.566007	NA	NA	NA	NA	NA	0.014	NA	4.9125
1161	1	196342444	196342444	A	G	intronic	KCNT2	NA	NA	NA	intronic	ENSG00000162687	NA	NA	NA	NA	NA	1q31.3	NA	Name=CTCF	NA	NA	rs73067629	0.09	0.09	0.086	0.0984425	0.0875	NA	0.0706	0.2504	0.0256	0.08	NA	0.07	0.2	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.421679	NA	NA	NA	NA	NA	0.087	NA	4.9125
1161	17	41061489	41061489	T	C	intronic	G6PC	NA	NA	NA	intronic	ENSG00000131482	NA	NA	NA	NA	NA	17q21.31	NA	NA	Name=14	NA	rs161622	0.12	0.12	0.118	0.145367	0.0875	0.004	0.147	0.2799	0.1677	0.09	0.0017	0.15	0.27	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.215167	NA	NA	NA	NA	NA	0.196	NA	4.9125
1161	17	78449258	78449258	G	T	intronic	NPTX1	NA	NA	NA	intronic	ENSG00000171246	NA	NA	NA	NA	NA	17q25.3	NA	NA	Name=18	NA	rs4996915	0.08	0.08	0.046	0.0974441	0.0875	0.1121	0.1484	0.0053	0.181	0.09	0.1	0.12	0.01	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.745888	NA	NA	NA	NA	NA	NA	NA	4.9125
1161	13	74518210	74518210	G	A	intronic	KLF12	NA	NA	NA	intronic	ENSG00000118922	NA	NA	NA	Score=653;Name=lod=603	NA	13q22.1	Score=758;Name=V$STAT5A_02	NA	NA	NA	rs9573330	0.31	0.31	0.307	0.317093	0.3728	0.2411	0.2723	0.3487	0.3272	0.35	0.24	0.29	0.33	0.3441	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.403313	1.403313	NA	0.370698	0.31616	NA	0.399	NA	4.912402
1161	1	154988957	154988957	A	G	exonic	ZBTB7B	NA	synonymous SNV	ZBTB7B:NM_001256455:exon3:c.A1416G:p.P472P,ZBTB7B:NM_001252406:exon5:c.A1518G:p.P506P	exonic	ENSG00000160685	NA	synonymous SNV	ENSG00000160685:ENST00000292176:exon2:c.A1416G:p.P472P,ENSG00000160685:ENST00000368426:exon4:c.A1416G:p.P472P,ENSG00000160685:ENST00000417934:exon5:c.A1518G:p.P506P,ENSG00000160685:ENST00000535420:exon5:c.A1416G:p.P472P	NA	NA	1q21.3	Score=887;Name=V$SPZ1_01	NA	NA	NA	rs2242195	0.65	0.65	0.615	0.673522	0.5785	0.9127	0.7478	0.4811	0.7321	0.55	0.93	0.7	0.46	0.6192	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.427585	NA	NA	0.556628	0.51271	NA	0.609	NA	4.9123386
1161	11	5142549	5142549	T	C	intergenic	OR52E2,OR52A5	dist=61692;dist=10373	NA	NA	ncRNA_exonic	ENSG00000205494	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs7947334	0.42	0.42	0.428	0.388778	0.3618	0.4792	0.3545	0.4607	0.2505	0.37	0.49	0.36	0.45	0.368	0.49	1	T	0.0	B	0.0	B	.	.	0.997	P	.	.	.	.	-0.922	T	0.000	T	.	1.007	9.111	1.13	0.138	-3.873	0.952	1.006509	NA	1	0.357957	0.443889	NA	0.42	NA	4.912243
1161	18	346821	346821	C	T	exonic	COLEC12	NA	synonymous SNV	COLEC12:NM_130386:exon5:c.G801A:p.T267T	exonic	ENSG00000158270	NA	synonymous SNV	ENSG00000158270:ENST00000400256:exon5:c.G801A:p.T267T	NA	NA	18p11.32	NA	NA	NA	NA	rs3826628	0.24	0.24	0.217	0.233227	0.2545	0.2153	0.2839	0.177	0.2699	0.26	0.26	0.28	0.15	0.2501	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.045599	NA	NA	0.25	0.182025	ID=COSM1388632;OCCURENCE=1(large_intestine)	0.232	NA	4.9120666
1161	2	212522450	212522450	C	T	intronic	ERBB4	NA	NA	NA	intronic	ENSG00000178568	NA	NA	NA	Score=694;Name=lod=882	NA	2q34	NA	NA	NA	NA	rs35497618	0.02	0.02	0.01	0.0141773	0.0288	NA	0.0331	0.0023	0.0164	0.03	NA	0.03	0.0041	0.0258	0.034	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.06403	2.06403	NA	0.033488	0.010894	NA	0.029	NA	4.911912
1161	12	103248924	103248924	C	T	exonic	PAH	NA	synonymous SNV	PAH:NM_000277:exon6:c.G696A:p.Q232Q	exonic	ENSG00000171759	NA	synonymous SNV	ENSG00000171759:ENST00000553106:exon6:c.G696A:p.Q232Q,ENSG00000171759:ENST00000307000:exon7:c.G681A:p.Q227Q	NA	NA	12q23.2	NA	NA	NA	NA	rs1126758	0.52	0.52	0.513	0.546526	0.5815	0.0794	0.6888	0.8011	0.547	0.58	0.08	0.68	0.83	0.5785	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.19514	NA	NA	0.594767	0.768271	NA	0.536	CLINSIG=untested;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000089040.1;CLNDSDB=.;CLNDSDBID=.	4.9118996
1161	5	177020602	177020602	A	C	intronic	TMED9	NA	NA	NA	intronic	ENSG00000184840	NA	NA	NA	NA	NA	5q35.3	NA	NA	Name=4	NA	rs114424853	0.02	0.02	0.014	0.0119808	0.0328	NA	0.0159	0.0015	0.0143	0.03	NA	0.02	0.0041	0.0231	0.032	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.225664	NA	NA	0.032326	0.006128	NA	0.007	NA	4.911774
1161	6	39851818	39851818	G	A	exonic	DAAM2	NA	synonymous SNV	DAAM2:NM_001201427:exon15:c.G1926A:p.K642K,DAAM2:NM_015345:exon15:c.G1926A:p.K642K	exonic	ENSG00000146122	NA	synonymous SNV	ENSG00000146122:ENST00000274867:exon15:c.G1926A:p.K642K,ENSG00000146122:ENST00000398904:exon15:c.G1926A:p.K642K,ENSG00000146122:ENST00000538976:exon15:c.G1926A:p.K642K	Score=554;Name=lod=237	NA	6p21.2	NA	NA	NA	NA	rs3003929	0.59	0.59	0.557	0.602236	0.5765	0.749	0.5504	0.4622	0.7035	0.58	0.77	0.51	0.48	0.6112	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.557025	NA	NA	0.567453	0.499212	NA	0.601	NA	4.9115136
1161	1	157029857	157029857	T	C	intergenic	ARHGEF11,ETV3L	dist=14695;dist=31978	NA	NA	ncRNA_exonic	ENSG00000237842	NA	NA	NA	Score=880;Name=lod=5040	NA	1q23.1	NA	NA	NA	NA	rs11577688	0.05	0.05	0.049	0.0485224	0.0885	0.002	0.0288	0.0537	0.0624	0.09	0.0035	0.03	0.04	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.907966	NA	NA	NA	NA	NA	0.043	NA	4.9115
1161	1	157030077	157030077	T	A	intergenic	ARHGEF11,ETV3L	dist=14915;dist=31758	NA	NA	ncRNA_exonic	ENSG00000237842	NA	NA	NA	Score=880;Name=lod=5040	NA	1q23.1	NA	NA	NA	NA	rs61329932	0.05	0.05	0.042	0.0485224	0.0885	0.002	0.0288	0.0537	0.0624	0.09	0.0035	0.03	0.04	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.523693	NA	NA	NA	NA	NA	0.043	NA	4.9115
1161	1	157030082	157030082	C	T	intergenic	ARHGEF11,ETV3L	dist=14920;dist=31753	NA	NA	ncRNA_exonic	ENSG00000237842	NA	NA	NA	Score=880;Name=lod=5040	NA	1q23.1	NA	NA	NA	NA	rs58824481	0.05	0.05	0.045	0.0485224	0.0885	0.002	0.0288	0.0537	0.0624	0.09	0.0035	0.03	0.04	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.843824	NA	NA	NA	NA	NA	0.043	NA	4.9115
1161	1	157030099	157030099	G	A	intergenic	ARHGEF11,ETV3L	dist=14937;dist=31736	NA	NA	ncRNA_exonic	ENSG00000237842	NA	NA	NA	Score=880;Name=lod=5040	NA	1q23.1	NA	NA	NA	NA	rs59571768	0.05	0.05	0.041	0.0485224	0.0885	0.002	0.0288	0.0537	0.0624	0.09	0.0035	0.03	0.04	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.429805	NA	NA	NA	NA	NA	0.043	NA	4.9115
1161	1	157030280	157030280	T	C	intergenic	ARHGEF11,ETV3L	dist=15118;dist=31555	NA	NA	ncRNA_exonic	ENSG00000237842	NA	NA	NA	Score=880;Name=lod=5040	NA	1q23.1	NA	NA	NA	NA	rs1706	0.06	0.06	0.072	0.0672923	0.0885	0.002	0.0375	0.1203	0.0624	0.09	0.0017	0.03	0.12	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.967932	NA	NA	NA	NA	NA	0.051	NA	4.9115
1161	2	28843909	28843909	G	A	intronic	PLB1	NA	NA	NA	intronic	ENSG00000163803	NA	NA	NA	NA	NA	2p23.2	NA	Name=BAF155	NA	NA	rs35166577	0.06	0.06	0.057	0.0461262	0.0885	NA	0.0461	0.0575	0.0348	0.09	NA	0.07	0.07	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.74029	NA	NA	NA	NA	NA	0.014	NA	4.9115
1161	3	149180264	149180264	T	A	intergenic	TM4SF1,TM4SF4	dist=84696;dist=12104	NA	NA	ncRNA_exonic	ENSG00000241929	NA	NA	NA	Score=486;Name=lod=126	NA	3q25.1	NA	NA	NA	NA	rs76363484	0.06	0.06	0.05	0.047524	0.0885	0.0268	0.0836	0.0189	0.0399	0.1	0.02	0.06	0.03	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.387969	1.387969	NA	NA	NA	NA	0.094	NA	4.9115
1161	3	149180288	149180288	G	A	intergenic	TM4SF1,TM4SF4	dist=84720;dist=12080	NA	NA	ncRNA_exonic	ENSG00000241929	NA	NA	NA	Score=486;Name=lod=126	NA	3q25.1	NA	NA	NA	NA	rs75245652	0.05	0.05	0.053	0.04373	0.0885	0.0268	0.0836	0.0121	0.0297	0.1	0.02	0.06	0.01	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.638065	NA	NA	NA	NA	NA	0.08	NA	4.9115
1161	19	41675829	41675829	C	T	intergenic	CYP2F1,CYP2S1	dist=41548;dist=23286	NA	NA	ncRNA_exonic	ENSG00000224476	NA	NA	NA	Score=696;Name=lod=900	NA	19q13.2	NA	NA	NA	NA	rs4802110	0.15	0.15	0.13	0.154952	0.0885	0.0804	0.268	0.2648	0.0716	0.08	0.1	0.24	0.24	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.956445	NA	0.04	NA	NA	NA	0.094	NA	4.9115
1161	2	230632268	230632268	G	A	UTR3	TRIP12	NM_004238:c.*2C>T	NA	NA	UTR3	ENSG00000153827	ENST00000283943:c.*2C>T,ENST00000389044:c.*2C>T,ENST00000389045:c.*2C>T	NA	NA	Score=499;Name=lod=142	NA	2q36.3	NA	NA	NA	NA	rs6687	0.15	0.15	0.152	0.147165	0.1461	0.1062	0.1873	0.2088	0.0787	0.14	0.11	0.19	0.19	0.1409	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.831067	1.831067	NA	0.134884	0.213799	NA	0.123	NA	4.9114494
1161	19	57065189	57065189	T	C	exonic	ZFP28	NA	synonymous SNV	ZFP28:NM_020828:exon8:c.T1035C:p.F345F	exonic	ENSG00000196867	NA	synonymous SNV	ENSG00000196867:ENST00000301318:exon8:c.T1035C:p.F345F	NA	NA	19q13.43	NA	NA	NA	NA	rs145011	0.23	0.23	0.205	0.231629	0.2396	0.3294	0.304	0.0545	0.3108	0.26	0.33	0.25	0.07	0.2632	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.179263	NA	NA	0.252674	0.073082	ID=COSM148774;OCCURENCE=1(stomach)	0.203	NA	4.9111926
1161	6	32709179	32709179	A	G	UTR5	HLA-DQA2	NM_020056:c.-42A>G	NA	NA	UTR5	ENSG00000237541	ENST00000374940:c.-42A>G	NA	NA	NA	NA	6p21.32	NA	Name=NFKB,TBP,TAF1,Pol2,Pol2-4H8	NA	NA	rs9276400	0.11	0.11	0.105	0.124401	0.1441	0.0724	0.1585	0.1218	0.137	0.13	0.06	0.16	0.12	0.1339	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.477267	NA	NA	0.144186	0.113709	NA	0.109	NA	4.9111474
1161	6	5000031	5000031	C	T	intronic	RPP40	NA	NA	NA	intronic	ENSG00000124787	NA	NA	NA	NA	NA	6p25.1	NA	NA	Name=10	NA	rs62385119	0.03	0.03	0.017	0.0277556	0.0278	0.0387	0.0303	0.0008	0.0511	0.03	0.04	0.04	NA	0.0278	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.13317	NA	NA	0.033279	0.003858	NA	0.022	NA	4.911121
1161	2	99995804	99995804	T	C	exonic	EIF5B	NA	synonymous SNV	EIF5B:NM_015904:exon12:c.T1974C:p.D658D	exonic	ENSG00000158417	NA	synonymous SNV	ENSG00000158417:ENST00000289371:exon12:c.T1974C:p.D658D	Score=502;Name=lod=146	NA	2q11.2	NA	NA	NA	NA	rs1376443	0.59	0.59	0.554	0.603834	0.5865	0.3681	0.7104	0.7602	0.5777	0.6	0.37	0.71	0.76	0.5973	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.197184	NA	NA	0.571881	0.751058	NA	0.572	NA	4.9109856
1161	5	96079402	96079402	C	T	intronic	CAST	NA	NA	NA	exonic	ENSG00000153113	NA	synonymous SNV	ENSG00000153113:ENST00000515663:exon1:c.C72T:p.D24D	NA	NA	5q15	NA	Name=GABP,c-Jun,GATA-2,Pol2	Name=72	NA	rs26506	0.55	0.55	0.534	0.541534	0.6759	0.4335	0.6297	0.4607	0.5613	0.66	0.47	0.61	0.45	0.6011	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.10206	NA	NA	0.645349	0.508398	NA	0.572	NA	4.9109843
1161	11	124135009	124135009	G	A	exonic	OR8G5	NA	nonsynonymous SNV	OR8G5:NM_001005198:exon1:c.G287A:p.C96Y	ncRNA_exonic	ENSG00000255298	NA	NA	NA	Score=431;Name=lod=75	NA	11q24.2	NA	NA	NA	NA	rs2512168	0.45	0.45	0.438	0.438498	0.5527	0.5833	0.5591	0.292	0.2843	0.49	0.55	0.49	0.23	0.4966	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.142865	NA	NA	0.540187	0.31789	NA	0.297	NA	4.910513
1161	7	94412664	94412664	A	T	intergenic	PEG10,PPP1R9A	dist=113658;dist=124285	NA	NA	ncRNA_exonic	ENSG00000230682	NA	NA	NA	Score=651;Name=lod=590	NA	7q21.3	NA	NA	NA	NA	rs7782084	0.13	0.13	0.135	0.148962	0.0895	0.1845	0.0447	0.2526	0.1074	0.1	0.13	0.05	0.23	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.360752	NA	NA	NA	NA	NA	0.123	NA	4.9105
1161	10	3150814	3150814	G	C	intronic	PFKP	NA	NA	NA	intronic	ENSG00000067057	NA	NA	NA	NA	NA	10p15.2	NA	Name=Pol2	NA	NA	rs17132175	0.07	0.07	0.061	0.0623003	0.0895	0.0099	0.0821	0.087	0.0409	0.09	0.01	0.1	0.09	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.10118	NA	NA	NA	NA	NA	0.072	NA	4.9105
1161	10	76979218	76979218	G	C	intronic	VDAC2	NA	NA	NA	intronic	ENSG00000165637	NA	NA	NA	NA	NA	10q22.2	NA	NA	Name=2	NA	rs7896741	0.19	0.19	0.179	0.170327	0.0895	0.249	0.1729	0.1876	0.1472	0.09	0.28	0.22	0.2	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.024012	NA	NA	NA	NA	NA	0.174	NA	4.9105
1161	13	79740834	79740834	T	C	intergenic	LINC00331,RBM26	dist=326649;dist=153266	NA	NA	ncRNA_exonic	ENSG00000226670	NA	NA	NA	Score=607;Name=lod=389	NA	13q31.1	NA	NA	NA	NA	rs55772342	0.04	0.04	0.024	0.0311502	0.0895	0.001	0.0663	0.0045	0.0133	0.07	0.0017	0.07	0.01	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.228365	NA	NA	NA	NA	NA	0.101	NA	4.9105
1161	14	22032592	22032592	G	A	intergenic	SALL2,OR10G3	dist=27255;dist=5342	NA	NA	ncRNA_exonic	ENSG00000256737	NA	NA	NA	Score=841;Name=lod=3499	NA	14q11.2	NA	NA	NA	NA	rs72686005	0.07	0.07	0.052	0.0766773	0.0895	0.0407	0.2709	0.0091	0.0542	0.09	0.02	0.21	0.02	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.372747	NA	NA	NA	NA	NA	0.101	NA	4.9105
1161	4	2341194	2341194	T	C	exonic	ZFYVE28	NA	synonymous SNV	ZFYVE28:NM_001172658:exon3:c.A366G:p.A122A,ZFYVE28:NM_001172656:exon4:c.A507G:p.A169A,ZFYVE28:NM_001172657:exon4:c.A507G:p.A169A,ZFYVE28:NM_001172659:exon4:c.A297G:p.A99A,ZFYVE28:NM_001172660:exon4:c.A297G:p.A99A,ZFYVE28:NM_020972:exon4:c.A507G:p.A169A	exonic	ENSG00000159733	NA	synonymous SNV	ENSG00000159733:ENST00000509171:exon3:c.A366G:p.A122A,ENSG00000159733:ENST00000290974:exon4:c.A507G:p.A169A,ENSG00000159733:ENST00000503000:exon4:c.A507G:p.A169A,ENSG00000159733:ENST00000511071:exon4:c.A507G:p.A169A,ENSG00000159733:ENST00000515169:exon4:c.A297G:p.A99A,ENSG00000159733:ENST00000515312:exon4:c.A297G:p.A99A	NA	NA	4p16.3	NA	NA	Name=4	NA	rs2071680	0.65	0.65	0.648	0.642173	0.5815	0.6994	0.7075	0.6944	0.5286	0.57	0.68	0.69	0.71	0.6036	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.785558	NA	NA	0.571628	0.678393	NA	0.739	NA	4.9099386
1161	1	48902552	48902552	G	A	intronic	SPATA6	NA	NA	NA	ncRNA_exonic	ENSG00000235105	NA	NA	NA	Score=692;Name=lod=867	NA	1p33	NA	NA	NA	NA	rs1890321	NA	NA	0.24	0.272564	0.4235	0.3462	0.3329	0.025	0.3333	NA	NA	NA	NA	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.211512	NA	NA	NA	NA	ID=COSN163078;OCCURENCE=1(breast)	0.319	NA	4.9098333
1161	4	113279968	113279968	C	G	intronic	ALPK1	NA	NA	NA	ncRNA_exonic	ENSG00000251441	NA	NA	NA	Score=425;Name=lod=71	NA	4q25	NA	NA	NA	NA	rs4834268	0.27	0.27	0.26	0.222045	0.4235	0.0595	0.3516	0.1891	0.135	0.42	0.06	0.37	0.19	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.127164	NA	NA	NA	NA	NA	0.312	NA	4.9098333
1161	8	87669743	87669743	G	A	intronic	CNGB3	NA	NA	NA	ncRNA_exonic	ENSG00000205333	NA	NA	NA	Score=414;Name=lod=64	NA	8q21.3	NA	NA	NA	NA	rs59109039	0.42	0.42	0.457	0.429313	0.4235	0.3839	0.3213	0.5635	0.3773	0.4	0.4	0.37	0.52	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.388713	NA	NA	NA	NA	NA	0.377	NA	4.9098333
1161	3	182410002	182410002	C	T	intergenic	FLJ46066,ATP11B	dist=205852;dist=101289	NA	NA	ncRNA_exonic	ENSG00000243378	NA	NA	NA	NA	NA	3q26.33	NA	Name=PAX5-C20	NA	NA	rs2717319	0.05	0.05	0.053	0.0509185	0.0905	0.0377	0.062	0.0182	0.0603	0.08	0.03	0.08	0.02	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.291697	NA	NA	NA	NA	NA	0.036	NA	4.9095
1161	15	78196749	78196749	G	A	intergenic	LOC253044,LOC645752	dist=255168;dist=9810	NA	NA	ncRNA_intronic	ENSG00000260139	NA	NA	NA	NA	NA	15q24.3	NA	Name=c-Myc	NA	NA	rs28434001	0.07	0.07	0.071	0.0646965	0.0905	0.0506	0.0576	0.0514	0.0757	0.08	0.06	0.06	0.07	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.568111	NA	NA	NA	NA	NA	0.094	NA	4.9095
1161	14	95918826	95918826	A	G	intronic	SYNE3	NA	NA	NA	intronic	ENSG00000176438	NA	NA	NA	NA	NA	14q32.13	NA	Name=CTCF	NA	NA	rs7145199	0.05	0.05	0.047	0.0551118	0.0905	0.002	0.0677	0.0189	0.1135	0.09	0.0017	0.09	0.02	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.320562	NA	NA	NA	NA	NA	0.123	NA	4.9095
1161	21	47532553	47532553	A	G	intronic	COL6A2	NA	NA	NA	intronic	ENSG00000142173	NA	NA	NA	NA	NA	21q22.3	Score=924;Name=V$ZIC3_01	NA	NA	NA	rs112472569	0.04	0.04	0.037	0.0255591	0.0905	NA	0.036	0.003	0.0082	0.08	NA	0.05	0.002	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.140713	NA	NA	NA	NA	NA	0.007	NA	4.9095
1161	22	22759094	22759094	T	C	intergenic	LOC96610,ZNF280B	dist=81770;dist=79678	NA	NA	downstream	ENSG00000253818	NA	NA	NA	NA	NA	22q11.22	NA	Name=PU.1,TCF12	Name=2	NA	rs427141	0.62	0.62	0.604	0.64996	0.5905	0.5575	0.696	0.7474	0.6421	0.59	0.56	0.65	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.241872	NA	NA	NA	NA	NA	0.63	NA	4.9095
1161	16	58545426	58545426	A	G	exonic	NDRG4	NA	synonymous SNV	NDRG4:NM_001242834:exon14:c.A1020G:p.S340S,NDRG4:NM_001242836:exon14:c.A966G:p.S322S,NDRG4:NM_001242833:exon15:c.A1056G:p.S352S,NDRG4:NM_001242835:exon15:c.A1005G:p.S335S,NDRG4:NM_001130487:exon16:c.A1122G:p.S374S,NDRG4:NM_020465:exon16:c.A1062G:p.S354S,NDRG4:NM_022910:exon16:c.A1062G:p.S354S	exonic	ENSG00000103034	NA	synonymous SNV	ENSG00000103034:ENST00000562999:exon13:c.A930G:p.S310S,ENSG00000103034:ENST00000563799:exon14:c.A1020G:p.S340S,ENSG00000103034:ENST00000566192:exon14:c.A966G:p.S322S,ENSG00000103034:ENST00000568640:exon14:c.A1020G:p.S340S,ENSG00000103034:ENST00000569923:exon14:c.A801G:p.S267S,ENSG00000103034:ENST00000356752:exon15:c.A1056G:p.S352S,ENSG00000103034:ENST00000570248:exon15:c.A1005G:p.S335S,ENSG00000103034:ENST00000258187:exon16:c.A1062G:p.S354S,ENSG00000103034:ENST00000394279:exon16:c.A1062G:p.S354S,ENSG00000103034:ENST00000394282:exon16:c.A1122G:p.S374S	NA	NA	16q21	Score=839;Name=V$EGR2_01	NA	NA	NA	rs42945	0.79	0.79	0.782	0.814297	0.5577	0.9673	0.7392	0.9561	0.7822	0.58	0.97	0.71	0.95	0.6629	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.364806	1.364806	NA	0.536886	0.883303	NA	0.768	NA	4.9091806
1161	6	139206592	139206592	G	C	intronic	ECT2L	NA	NA	NA	intronic	ENSG00000203734	NA	NA	NA	NA	NA	6q24.1	NA	NA	Name=6	NA	rs17067990	0.12	0.12	0.133	0.127396	0.0209	0.2173	0.0346	0.2474	0.0481	0.02	0.23	0.04	0.22	0.0509	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.939118	NA	NA	0.019059	0.179836	NA	0.116	NA	4.909141
1161	10	129903465	129903465	A	G	exonic	MKI67	NA	synonymous SNV	MKI67:NM_001145966:exon12:c.T5559C:p.H1853H,MKI67:NM_002417:exon13:c.T6639C:p.H2213H	exonic	ENSG00000148773	NA	synonymous SNV	ENSG00000148773:ENST00000368653:exon12:c.T5559C:p.H1853H,ENSG00000148773:ENST00000368654:exon13:c.T6639C:p.H2213H	NA	NA	10q26.2	NA	NA	NA	NA	rs2857028	0.21	0.21	0.18	0.190895	0.2704	0.12	0.3156	0.1172	0.1933	0.27	0.15	0.33	0.1	0.2393	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.416215	NA	NA	0.248023	0.131185	NA	0.152	NA	4.9089436
1161	7	51327575	51327575	C	T	intronic	COBL	NA	NA	NA	ncRNA_exonic	ENSG00000231490	NA	NA	NA	Score=589;Name=lod=331	NA	7p12.1	NA	NA	NA	NA	rs11767820	0.25	0.25	0.227	0.221046	0.4245	0.1548	0.2493	0.0401	0.3047	0.44	0.14	0.27	0.04	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.223983	NA	NA	NA	NA	NA	0.254	NA	4.9088333
1161	1	151783736	151783736	G	A	intronic	RORC	NA	NA	NA	intronic	ENSG00000143365	NA	NA	NA	NA	NA	1q21.3	NA	NA	Name=25	NA	rs2280471	0.11	0.11	0.114	0.0988419	0.0915	0.1478	0.0865	0.0961	0.0685	0.09	0.16	0.07	0.09	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.545191	NA	NA	NA	NA	NA	0.152	NA	4.9085
1161	15	90347331	90347331	G	A	intronic	ANPEP	NA	NA	NA	intronic	ENSG00000166825	NA	NA	NA	NA	NA	15q26.1	NA	NA	Name=13	NA	rs55977698	0.05	0.05	0.043	0.0409345	0.0915	0.001	0.0389	0.0287	0.0481	0.09	0.0035	0.03	0.04	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.795643	NA	NA	NA	NA	NA	0.101	NA	4.9085
1161	5	6656210	6656210	G	A	exonic	SRD5A1	NA	synonymous SNV	SRD5A1:NM_001047:exon3:c.G480A:p.T160T	exonic	ENSG00000145545	NA	nonsynonymous SNV	ENSG00000145545:ENST00000513117:exon2:c.G313A:p.G105R	NA	NA	5p15.31	NA	NA	NA	NA	rs3736316	0.32	0.32	0.305	0.288938	0.3897	0.1587	0.3919	0.3298	0.1912	0.37	0.15	0.43	0.35	0.3277	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.15955	NA	NA	0.374186	0.329551	ID=COSM149789;OCCURENCE=1(stomach)	0.464	NA	4.908414
1161	4	56475338	56475338	G	A	exonic	NMU	NA	synonymous SNV	NMU:NM_006681:exon4:c.C228T:p.N76N	exonic	ENSG00000109255	NA	synonymous SNV	ENSG00000109255:ENST00000511469:exon3:c.C180T:p.N60N,ENSG00000109255:ENST00000264218:exon4:c.C228T:p.N76N,ENSG00000109255:ENST00000505262:exon4:c.C228T:p.N76N,ENSG00000109255:ENST00000507338:exon4:c.C228T:p.N76N	NA	NA	4q12	NA	NA	NA	NA	rs3805383	0.19	0.19	0.171	0.197085	0.2783	0.1042	0.1844	0.1362	0.3006	0.29	0.11	0.23	0.1	0.2312	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.458083	NA	NA	0.248837	0.149342	NA	0.196	NA	4.9083296
1161	14	58838668	58838668	A	G	exonic	ARID4A	NA	synonymous SNV	ARID4A:NM_023001:exon23:c.A3528G:p.S1176S,ARID4A:NM_002892:exon24:c.A3735G:p.S1245S,ARID4A:NM_023000:exon24:c.A3573G:p.S1191S	exonic	ENSG00000032219	NA	synonymous SNV	ENSG00000032219:ENST00000431317:exon22:c.A3528G:p.S1176S,ENSG00000032219:ENST00000348476:exon23:c.A3528G:p.S1176S,ENSG00000032219:ENST00000355431:exon24:c.A3735G:p.S1245S,ENSG00000032219:ENST00000395168:exon24:c.A3573G:p.S1191S	Score=563;Name=lod=258	NA	14q23.1	NA	NA	NA	NA	rs1051860	0.51	0.51	0.484	0.539137	0.5915	0.4762	0.6902	0.3797	0.6585	0.57	0.47	0.65	0.39	0.5777	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.269886	NA	NA	0.589651	0.414435	NA	0.565	NA	4.9078156
1161	1	82187986	82187986	A	C	intergenic	NONE,LPHN2	dist=NONE;dist=78096	NA	NA	ncRNA_intronic	ENSG00000215875	NA	NA	NA	Score=537;Name=lod=203	NA	1p31.1	NA	NA	NA	NA	rs115855639	0.06	0.06	0.048	0.0626997	0.0924	0.0476	0.0418	0.0492	0.0808	0.09	0.06	0.05	0.05	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.408126	NA	NA	NA	NA	NA	0.058	NA	4.9076
1161	1	82188040	82188040	T	C	intergenic	NONE,LPHN2	dist=NONE;dist=78042	NA	NA	ncRNA_exonic	ENSG00000215875	NA	NA	NA	Score=537;Name=lod=203	NA	1p31.1	NA	NA	NA	NA	rs115420117	0.07	0.07	0.064	0.0708866	0.0924	0.0476	0.0447	0.0787	0.0808	0.09	0.06	0.05	0.07	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.885268	NA	NA	NA	NA	NA	0.065	NA	4.9076
1161	4	69727220	69727220	C	T	intergenic	UGT2B10,UGT2A3	dist=29479;dist=66957	NA	NA	ncRNA_exonic	ENSG00000249235	NA	NA	NA	Score=537;Name=lod=203	NA	4q13.2	NA	NA	NA	NA	rs78060896	0.13	0.13	0.117	0.114217	0.0924	0.1756	0.0836	0.1407	0.0593	0.11	0.17	0.09	0.13	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.551143	2.551143	NA	NA	NA	NA	0.167	NA	4.9076
1161	5	32093210	32093210	C	T	intronic	PDZD2	NA	NA	NA	intronic	ENSG00000133401	NA	NA	NA	NA	NA	5p13.3	NA	Name=ZNF263	NA	NA	rs28450841	0.13	0.13	0.128	0.127995	0.0924	0.2381	0.1484	0.0658	0.1207	0.08	0.26	0.11	0.05	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.69261	NA	NA	NA	NA	NA	0.072	NA	4.9076
1161	5	141304326	141304326	T	G	intronic	KIAA0141	NA	NA	NA	intronic	ENSG00000081791	NA	NA	NA	NA	NA	5q31.3	NA	Name=Pol2	NA	NA	rs112383381	NA	NA	0.049	0.147564	0.0924	0.0437	0.0706	0.3041	0.1544	NA	NA	NA	NA	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.492044	NA	NA	NA	NA	NA	0.101	NA	4.9076
1161	9	140416025	140416025	A	G	intronic	PNPLA7	NA	NA	NA	intronic	ENSG00000130653	NA	NA	NA	NA	NA	9q34.3	NA	NA	Name=3	NA	rs2298172	0.22	0.22	0.211	0.229034	0.0924	0.2341	0.0908	0.4728	0.1329	0.1	0.23	0.09	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.608359	NA	NA	NA	NA	ID=COSN168710;OCCURENCE=1(large_intestine)	0.283	NA	4.9076
1161	2	152475938	152475938	T	G	intronic	NEB	NA	NA	NA	intronic	ENSG00000183091	NA	NA	NA	NA	NA	2q23.3	NA	Name=JunD,c-Jun,eGFP-JunD,GATA-2,c-Fos,PU.1,CTCF	Name=67	NA	rs10186656	0.29	0.29	0.266	0.248802	0.3688	0.245	0.281	0.1702	0.2127	0.37	0.26	0.28	0.19	0.3408	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.365189	NA	NA	0.382953	0.174684	NA	0.225	NA	4.907447
1161	22	26690407	26690407	T	C	intronic	SEZ6L	NA	NA	NA	intronic	ENSG00000100095	NA	NA	NA	NA	NA	22q12.1	NA	Name=EBF1_(C-8),EBF	Name=13	NA	rs137204	0.25	0.25	0.239	0.210264	0.3847	0.003	0.2695	0.2708	0.1207	0.39	NA	0.32	0.26	0.3074	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.584932	NA	NA	0.400814	0.279846	NA	0.196	NA	4.907086
1161	22	26937327	26937327	C	G	exonic	TPST2	NA	synonymous SNV	TPST2:NM_001008566:exon3:c.G270C:p.A90A,TPST2:NM_003595:exon3:c.G270C:p.A90A	exonic	ENSG00000128294	NA	synonymous SNV	ENSG00000128294:ENST00000442495:exon2:c.G270C:p.A90A,ENSG00000128294:ENST00000338754:exon3:c.G270C:p.A90A,ENSG00000128294:ENST00000398110:exon3:c.G270C:p.A90A,ENSG00000128294:ENST00000454778:exon3:c.G270C:p.A90A,ENSG00000128294:ENST00000403880:exon4:c.G270C:p.A90A	Score=633;Name=lod=498	NA	22q12.1	Score=833;Name=V$ROAZ_01	NA	NA	NA	rs4822735	0.97	0.97	0.071	0.914537	0.9294	1	0.9337	0.7746	0.9867	0.92	1	0.96	1	0.9216	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.994536	NA	NA	0.909017	0.983182	NA	0.862	NA	4.9066496
1161	2	184022112	184022112	A	G	intronic	NUP35	NA	NA	NA	intronic	ENSG00000163002	NA	NA	NA	NA	NA	2q32.1	NA	NA	Name=6	NA	rs72894593	0.03	0.03	0.033	0.0285543	0.0497	NA	0.0375	0.0356	0.0204	0.05	NA	0.04	0.04	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.542633	NA	NA	0.043683	0.021676	NA	0.072	NA	4.906617
1161	5	114726461	114726461	T	C	intergenic	CCDC112,FEM1C	dist=94003;dist=130147	NA	NA	ncRNA_exonic	ENSG00000249026	NA	NA	NA	Score=795;Name=lod=2268	NA	5q22.3	NA	NA	NA	NA	rs3752052	0.11	0.11	0.103	0.102835	0.0934	0.1151	0.1052	0.1399	0.0481	0.09	0.12	0.08	0.15	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.192869	NA	NA	NA	NA	NA	0.109	NA	4.9066
1161	14	21631426	21631426	C	T	intergenic	OR5AU1,LINC00641	dist=7242;dist=36812	NA	NA	ncRNA_exonic	ENSG00000259102	NA	NA	NA	Score=795;Name=lod=2266	NA	14q11.2	NA	NA	NA	NA	rs10149869	0.16	0.16	0.17	0.173722	0.0934	0.3333	0.1383	0.1452	0.1554	0.08	0.29	0.14	0.14	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.27114	NA	NA	NA	NA	ID=COSN164608;OCCURENCE=1(breast)	0.145	NA	4.9066
1161	14	25901275	25901275	G	A	intergenic	STXBP6,NOVA1	dist=382180;dist=1013814	NA	NA	ncRNA_exonic	ENSG00000257976	NA	NA	NA	Score=671;Name=lod=713	NA	14q12	NA	NA	NA	NA	rs112958249	0.05	0.05	0.036	0.0541134	0.0934	0.001	0.0576	0.0023	0.136	0.1	NA	0.07	0.0041	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.4798	NA	NA	NA	NA	NA	0.036	NA	4.9066
1161	21	37660190	37660190	C	T	intronic	DOPEY2	NA	NA	NA	intronic	ENSG00000142197	NA	NA	NA	NA	NA	21q22.12	NA	NA	Name=3	NA	rs78702655	0.06	0.06	0.061	0.052516	0.0934	0.004	0.0793	0.0575	0.0348	0.09	NA	0.09	0.07	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.134263	NA	NA	NA	NA	NA	0.051	NA	4.9066
1161	19	3767265	3767265	C	T	exonic	MRPL54	NA	synonymous SNV	MRPL54:NM_172251:exon3:c.C291T:p.F97F	exonic	ENSG00000183617	NA	synonymous SNV	ENSG00000183617:ENST00000330133:exon3:c.C291T:p.F97F	Score=401;Name=lod=57	NA	19p13.3	NA	NA	NA	NA	rs7239	0.62	0.62	0.592	0.607827	0.5775	0.8026	0.621	0.4236	0.6779	0.58	0.81	0.63	0.46	0.5995	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.128313	NA	NA	0.583256	0.471857	NA	0.594	NA	4.9064106
1161	2	44104925	44104925	T	C	exonic	ABCG8	NA	nonsynonymous SNV	ABCG8:NM_022437:exon13:c.T1895C:p.V632A	exonic	ENSG00000143921	NA	nonsynonymous SNV	ENSG00000143921:ENST00000272286:exon13:c.T1895C:p.V632A	NA	NA	2p21	NA	NA	NA	NA	rs6544718	0.89	0.89	0.911	0.922923	0.8042	1	0.8559	0.9887	0.9243	0.79	1	0.83	0.98	0.8421	1	0.91	T	0.0	B	0.0	B	0.556	N	1.000	P	-1.78	N	2.43	T	-1.008	T	0.000	T	0.021	-0.756	0.801	0.054	-0.225	0.137	5.343	-0.755503	NA	1	0.780814	0.947345	NA	0.92	NA	4.9062194
1161	22	26956495	26956495	A	G	intronic	TPST2	NA	NA	NA	ncRNA_exonic	ENSG00000213707	NA	NA	NA	Score=751;Name=lod=1507	NA	22q12.1	NA	NA	NA	NA	rs9613210	0.45	0.45	0.376	0.43131	0.4274	0.5784	0.464	0.2958	0.4438	0.43	0.55	0.49	0.33	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.046771	3.046771	NA	NA	NA	NA	0.29	NA	4.9059333
1161	1	80749361	80749361	G	A	intergenic	ELTD1,LPHN2	dist=1276866;dist=1516721	NA	NA	ncRNA_exonic	ENSG00000236407	NA	NA	NA	Score=664;Name=lod=664	NA	1p31.1	NA	NA	NA	NA	rs1776290	0.14	0.14	0.14	0.142971	0.0944	0.0962	0.2349	0.1936	0.1074	0.1	0.12	0.21	0.19	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.668005	NA	NA	NA	NA	NA	0.116	NA	4.9056
1161	5	114727021	114727021	G	A	intergenic	CCDC112,FEM1C	dist=94563;dist=129587	NA	NA	ncRNA_exonic	ENSG00000249026	NA	NA	NA	Score=639;Name=lod=529	NA	5q22.3	NA	NA	NA	NA	rs3752051	0.11	0.11	0.106	0.10623	0.0944	0.1151	0.1066	0.1513	0.0481	0.09	0.12	0.08	0.16	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.224048	NA	NA	NA	NA	NA	0.145	NA	4.9056
1161	5	114727085	114727085	C	T	intergenic	CCDC112,FEM1C	dist=94627;dist=129523	NA	NA	ncRNA_exonic	ENSG00000249026	NA	NA	NA	Score=639;Name=lod=529	NA	5q22.3	NA	NA	NA	NA	rs3752050	0.08	0.08	0.066	0.072484	0.0944	0.1181	0.1009	0.025	0.047	0.09	0.12	0.07	0.02	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.041122	NA	NA	NA	NA	NA	0.065	NA	4.9056
1161	5	114727949	114727949	C	T	intergenic	CCDC112,FEM1C	dist=95491;dist=128659	NA	NA	ncRNA_exonic	ENSG00000249026	NA	NA	NA	Score=667;Name=lod=683	NA	5q22.3	NA	NA	NA	NA	rs3752048	0.08	0.08	0.073	0.0720847	0.0944	0.1151	0.1009	0.025	0.0481	0.09	0.12	0.07	0.02	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.365414	NA	NA	NA	NA	NA	0.058	NA	4.9056
1161	10	93427302	93427302	G	A	intergenic	PPP1R3C,TNKS2	dist=34444;dist=130849	NA	NA	ncRNA_exonic	ENSG00000213449	NA	NA	NA	Score=681;Name=lod=778	NA	10q23.32	NA	NA	NA	NA	rs75343000	0.04	0.04	0.032	0.0315495	0.0944	0.001	0.0533	0.0061	0.0174	0.09	NA	0.04	0.01	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.310872	NA	NA	NA	NA	NA	0.014	NA	4.9056
1161	16	68598007	68598007	A	G	exonic	ZFP90	NA	synonymous SNV	ZFP90:NM_133458:exon4:c.A1317G:p.Q439Q	exonic	ENSG00000184939	NA	synonymous SNV	ENSG00000184939:ENST00000398253:exon4:c.A1317G:p.Q439Q,ENSG00000184939:ENST00000563169:exon5:c.A1317G:p.Q439Q,ENSG00000184939:ENST00000570495:exon5:c.A1317G:p.Q439Q	NA	NA	16q22.1	NA	Name=SETDB1,ZNF274	NA	NA	rs1177648	0.55	0.55	0.527	0.528754	0.5676	0.7659	0.6167	0.1884	0.6421	0.6	0.78	0.59	0.17	0.5975	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.452763	NA	NA	0.596319	0.260359	NA	0.478	NA	4.9052476
1162	2	111725811	111725811	A	G	intronic	ACOXL	NA	NA	NA	ncRNA_exonic	ENSG00000236330	NA	NA	NA	Score=803;Name=lod=2438	NA	2q13	NA	NA	NA	NA	rs13432362	0.38	0.38	0.315	0.33766	0.4284	0.3413	0.562	0.1399	0.3487	0.42	0.38	0.55	0.17	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.160967	NA	NA	NA	NA	NA	0.377	NA	4.9049333
1162	22	35806616	35806616	T	C	intronic	MCM5	NA	NA	NA	intronic	ENSG00000100297	NA	NA	NA	NA	NA	22q12.3	NA	Name=Pol2,Pol2-4H8,TCF12	NA	NA	rs4645776	0.03	0.03	0.032	0.0251597	0.0457	0.004	0.0216	0.0295	0.0225	0.05	0.01	0.02	0.03	0.0494	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.67301	NA	NA	NA	NA	NA	0.014	NA	4.9049
1162	17	18855611	18855611	T	C	exonic	SLC5A10	NA	synonymous SNV	SLC5A10:NM_001042450:exon1:c.T93C:p.N31N,SLC5A10:NM_001270648:exon1:c.T93C:p.N31N,SLC5A10:NM_001270649:exon1:c.T93C:p.N31N,SLC5A10:NM_152351:exon1:c.T93C:p.N31N	exonic	ENSG00000154025	NA	synonymous SNV	ENSG00000154025:ENST00000395643:exon1:c.T93C:p.N31N,ENSG00000154025:ENST00000395645:exon1:c.T93C:p.N31N,ENSG00000154025:ENST00000395647:exon1:c.T93C:p.N31N,ENSG00000154025:ENST00000417251:exon1:c.T93C:p.N31N	Score=433;Name=lod=77	NA	17p11.2	NA	NA	NA	NA	rs2076562	0.39	0.39	0.399	0.372404	0.6173	0.2331	0.513	0.1687	0.4397	0.62	0.23	0.51	0.15	0.5289	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.970508	1.970508	0	0.615845	0.240647	ID=COSM1630073;OCCURENCE=1(liver)	0.507	NA	4.9046216
1162	4	69651804	69651804	A	T	intergenic	UGT2B15,UGT2B10	dist=115310;dist=29909	NA	NA	ncRNA_exonic	ENSG00000250376	NA	NA	NA	Score=414;Name=lod=64	NA	4q13.2	NA	NA	NA	NA	rs72848067	0.12	0.12	0.112	0.104233	0.0954	0.1855	0.0793	0.0915	0.0644	0.11	0.19	0.09	0.09	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.273837	NA	NA	NA	NA	NA	0.181	NA	4.9046
1162	6	29961367	29961367	G	A	intergenic	HCG9,ZNRD1-AS1	dist=15190;dist=7421	NA	NA	ncRNA_exonic	ENSG00000238024	NA	NA	NA	Score=460;Name=lod=99	NA	6p22.1	NA	NA	NA	NA	rs9260967	0.19	0.19	0.198	0.192292	0.0954	0.1905	0.1744	0.3011	0.1595	0.09	0.2	0.2	0.3	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.547371	NA	NA	NA	NA	NA	0.167	NA	4.9046
1162	9	4604171	4604171	G	C	intronic	SPATA6L	NA	NA	NA	intronic	ENSG00000106686	NA	NA	NA	NA	NA	9p24.1	Score=833;Name=V$E4BP4_01	NA	NA	NA	rs16921597	0.06	0.06	0.048	0.0603035	0.0258	0.0159	0.0908	0.1044	0.0603	0.03	0.02	0.09	0.12	0.0404	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.457244	NA	NA	0.029318	0.088061	NA	0.101	NA	4.904482
1162	1	214531239	214531239	C	T	UTR3	PTPN14	NM_005401:c.*26G>A	NA	NA	UTR3	ENSG00000152104	ENST00000366956:c.*26G>A	NA	NA	NA	NA	1q41	Score=801;Name=V$HEN1_02	NA	NA	NA	rs2291831	0.16	0.16	0.152	0.150958	0.1421	0.1647	0.134	0.1853	0.1115	0.14	0.17	0.16	0.17	0.1447	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.945503	1.945503	NA	0.142442	0.193146	ID=COSN163437;OCCURENCE=1(breast)	0.123	NA	4.9040914
1162	20	25281398	25281398	C	T	UTR3	ABHD12	NM_001042472:c.*83G>A	NA	NA	UTR3	ENSG00000100997	ENST00000465694:c.*83G>A,ENST00000339157:c.*83G>A	NA	NA	NA	NA	20p11.21	NA	Name=Pol2	NA	NA	rs2424708	0.49	0.49	0.475	0.451677	0.4294	0.9077	0.3156	0.1755	0.4744	0.43	0.92	0.32	0.21	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.067837	NA	NA	NA	NA	NA	0.37	NA	4.9039334
1162	16	70030103	70030103	G	A	ncRNA_exonic	PDXDC2P	NA	NA	NA	ncRNA_exonic	ENSG00000196696	NA	NA	NA	NA	NA	16q22.1	NA	NA	Name=8	NA	rs62051315	0.23	0.23	0.162	0.185903	0.4046	0.0843	0.3242	0.0234	0.1871	0.41	0.1	0.34	0.02	0.3582	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.494232	NA	NA	NA	NA	NA	0.022	NA	4.9038666
1162	12	114400007	114400007	A	C	intronic	RBM19	NA	NA	NA	intronic	ENSG00000122965	NA	NA	NA	NA	NA	12q24.21	NA	NA	Name=2	NA	rs117435297	0.08	0.08	0.064	0.077476	0.0268	0.1131	0.2421	0.0461	0.0184	0.03	0.13	0.19	0.03	0.0496	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.346398	NA	NA	0.019884	0.034498	NA	0.029	NA	4.903716
1162	4	113377952	113377952	A	G	intergenic	ALPK1,NEUROG2	dist=14188;dist=56720	NA	NA	ncRNA_exonic	ENSG00000248697	NA	NA	NA	Score=682;Name=lod=789	NA	4q25	NA	NA	NA	NA	rs2074382	0.19	0.19	0.148	0.197484	0.0964	0.4077	0.0951	0.1286	0.2505	0.09	0.39	0.12	0.14	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.92154	NA	NA	NA	NA	NA	0.167	NA	4.9036
1162	5	123556673	123556673	T	G	intergenic	CSNK1G3,ZNF608	dist=603935;dist=415937	NA	NA	ncRNA_exonic	ENSG00000250862	NA	NA	NA	Score=727;Name=lod=1199	NA	5q23.2	NA	NA	NA	NA	rs55794487	0.19	0.19	0.194	0.21246	0.0964	0.3819	0.1599	0.1611	0.2638	0.09	0.38	0.15	0.16	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.872423	NA	NA	NA	NA	NA	0.275	NA	4.9036
1162	5	123556732	123556732	G	A	intergenic	CSNK1G3,ZNF608	dist=603994;dist=415878	NA	NA	ncRNA_exonic	ENSG00000250862	NA	NA	NA	Score=727;Name=lod=1199	NA	5q23.2	NA	NA	NA	NA	rs17151423	0.18	0.18	0.18	0.196486	0.0964	0.381	0.1542	0.1029	0.2658	0.09	0.38	0.15	0.12	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.375762	NA	NA	NA	NA	NA	0.261	NA	4.9036
1162	9	123583192	123583192	A	G	exonic	PSMD5	NA	synonymous SNV	PSMD5:NM_001270427:exon8:c.T1053C:p.D351D,PSMD5:NM_005047:exon9:c.T1182C:p.D394D	exonic	ENSG00000095261	NA	synonymous SNV	ENSG00000095261:ENST00000604848:exon2:c.T153C:p.D51D,ENSG00000095261:ENST00000373920:exon3:c.T201C:p.D67D,ENSG00000095261:ENST00000373904:exon8:c.T1053C:p.D351D,ENSG00000095261:ENST00000210313:exon9:c.T1182C:p.D394D	Score=343;Name=lod=33	NA	9q33.2	NA	NA	NA	NA	rs1060817	0.48	0.48	0.438	0.488419	0.5895	0.4673	0.6571	0.1626	0.727	0.59	0.46	0.63	0.22	0.5794	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.112383	NA	NA	0.594535	0.230822	NA	0.5	NA	4.9032316
1162	5	150425467	150425467	G	A	exonic	TNIP1	NA	synonymous SNV	TNIP1:NM_001252386:exon8:c.C732T:p.G244G,TNIP1:NM_001258455:exon8:c.C891T:p.G297G,TNIP1:NM_001258456:exon8:c.C891T:p.G297G,TNIP1:NM_001252385:exon9:c.C891T:p.G297G,TNIP1:NM_001252390:exon9:c.C891T:p.G297G,TNIP1:NM_001252391:exon9:c.C891T:p.G297G,TNIP1:NM_001252392:exon9:c.C891T:p.G297G,TNIP1:NM_001252393:exon9:c.C891T:p.G297G,TNIP1:NM_001258454:exon9:c.C891T:p.G297G,TNIP1:NM_006058:exon9:c.C891T:p.G297G	exonic	ENSG00000145901	NA	synonymous SNV	ENSG00000145901:ENST00000519339:exon7:c.C732T:p.G244G,ENSG00000145901:ENST00000520931:exon8:c.C732T:p.G244G,ENSG00000145901:ENST00000522100:exon8:c.C732T:p.G244G,ENSG00000145901:ENST00000523200:exon8:c.C891T:p.G297G,ENSG00000145901:ENST00000524280:exon8:c.C891T:p.G297G,ENSG00000145901:ENST00000315050:exon9:c.C891T:p.G297G,ENSG00000145901:ENST00000389378:exon9:c.C891T:p.G297G,ENSG00000145901:ENST00000518977:exon9:c.C891T:p.G297G,ENSG00000145901:ENST00000521591:exon9:c.C891T:p.G297G,ENSG00000145901:ENST00000522226:exon9:c.C891T:p.G297G,ENSG00000145901:ENST00000523338:exon9:c.C891T:p.G297G	NA	NA	5q33.1	NA	NA	NA	NA	rs2233299	0.17	0.17	0.17	0.13119	0.2803	0.0625	0.1758	0.0673	0.1033	0.28	0.07	0.19	0.09	0.2075	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.008455	2.008455	NA	0.276047	0.110077	NA	0.08	NA	4.9028196
1162	20	33470694	33470694	C	T	exonic	ACSS2	NA	synonymous SNV	ACSS2:NM_001076552:exon2:c.C276T:p.F92F,ACSS2:NM_018677:exon2:c.C276T:p.F92F	exonic	ENSG00000131069	NA	synonymous SNV	ENSG00000131069:ENST00000253382:exon2:c.C276T:p.F92F,ENSG00000131069:ENST00000336325:exon2:c.C126T:p.F42F,ENSG00000131069:ENST00000360596:exon2:c.C276T:p.F92F,ENSG00000131069:ENST00000473172:exon2:c.C276T:p.F92F,ENSG00000131069:ENST00000475459:exon2:c.C126T:p.F42F,ENSG00000131069:ENST00000477932:exon2:c.C276T:p.F92F,ENSG00000131069:ENST00000480978:exon2:c.C276T:p.F92F,ENSG00000131069:ENST00000484354:exon2:c.C252T:p.F84F,ENSG00000131069:ENST00000488172:exon2:c.C126T:p.F42F,ENSG00000131069:ENST00000493805:exon2:c.C276T:p.F92F	Score=723;Name=lod=1159	NA	20q11.22	NA	NA	NA	NA	rs4911163	0.47	0.47	0.477	0.512181	0.5706	0.4355	0.3516	0.4304	0.7556	0.59	0.42	0.41	0.4	0.5762	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.035752	NA	NA	0.617093	0.465275	NA	0.601	NA	4.9027736
1162	1	158985652	158985652	T	C	intronic	IFI16	NA	NA	NA	UTR5	ENSG00000163565	ENST00000474473:c.-764T>C,ENST00000567661:c.-764T>C	NA	NA	NA	NA	1q23.1	NA	Name=PAX5-N19,Pol2,Pol2(b)	NA	NA	rs4262539	0.07	0.07	0.072	0.0710863	0.0895	NA	0.0764	0.1135	0.0644	0.09	NA	0.08	0.13	0.0834	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.434778	NA	NA	0.091163	0.106219	NA	0.174	NA	4.9026037
1162	10	98510351	98510351	A	T	intergenic	PIK3AP1,LCOR	dist=30072;dist=81666	NA	NA	ncRNA_exonic	ENSG00000236552	NA	NA	NA	Score=592;Name=lod=340	NA	10q24.1	NA	NA	NA	NA	rs3789959	0.1	0.1	0.078	0.0904553	0.0974	0.1885	0.0821	0.0076	0.1002	0.09	0.19	0.07	0.01	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.993567	NA	NA	NA	NA	NA	0.087	NA	4.9026
1162	17	72368550	72368550	T	C	exonic	GPR142	NA	synonymous SNV	GPR142:NM_181790:exon4:c.T1200C:p.N400N	exonic	ENSG00000257008	NA	synonymous SNV	ENSG00000257008:ENST00000335666:exon4:c.T1200C:p.N400N	Score=594;Name=lod=346	NA	17q25.1	NA	NA	NA	NA	rs11658891	0.57	0.57	0.576	0.595647	0.5845	0.4067	0.4827	0.77	0.6462	0.59	0.41	0.52	0.77	0.5901	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.405969	NA	NA	0.589767	0.741035	NA	0.601	NA	4.9022996
1162	19	23542697	23542697	G	C	exonic	ZNF91	NA	synonymous SNV	ZNF91:NM_003430:exon4:c.C3084G:p.G1028G	exonic	ENSG00000167232	NA	synonymous SNV	ENSG00000167232:ENST00000397082:exon3:c.C2988G:p.G996G,ENSG00000167232:ENST00000300619:exon4:c.C3084G:p.G1028G	Score=317;Name=lod=26	NA	19p12	NA	NA	NA	NA	rs1821845	0.43	0.43	0.404	0.434305	0.6193	0.1855	0.5101	0.3956	0.499	0.62	0.18	0.53	0.37	0.541	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.377122	NA	NA	0.604215	0.425057	NA	0.5	NA	4.9021516
1162	6	41634766	41634766	T	C	intergenic	MDFI,TFEB	dist=12784;dist=16950	NA	NA	ncRNA_exonic	ENSG00000230913	NA	NA	NA	Score=510;Name=lod=158	NA	6p21.1	NA	NA	NA	NA	rs112506759	0.08	0.08	0.074	0.0706869	0.0984	NA	0.0749	0.1309	0.0307	0.1	NA	0.09	0.13	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.04529	2.04529	NA	NA	NA	NA	0.072	NA	4.9016
1162	9	92995368	92995368	C	A	intergenic	LOC286370,LOC340515	dist=191587;dist=229346	NA	NA	ncRNA_exonic	ENSG00000225072	NA	NA	NA	NA	NA	9q22.2	NA	NA	Name=13	NA	rs56125584	0.06	0.06	0.058	0.102037	0.0984	0.0823	0.0432	0.0045	0.2996	0.1	0.08	0.04	0.01	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.634373	NA	NA	NA	NA	NA	0.08	NA	4.9016
1162	10	121429256	121429256	A	G	intronic	BAG3	NA	NA	NA	intronic	ENSG00000151929	NA	NA	NA	NA	NA	10q26.11	Score=868;Name=V$ATF6_01	NA	NA	NA	rs2240777	0.18	0.18	0.16	0.185304	0.0984	0.2609	0.1801	0.27	0.0859	0.09	0.26	0.14	0.26	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.512829	NA	NA	NA	NA	NA	0.225	NA	4.9016
1162	14	31290663	31290663	G	A	intergenic	SCFD1,COCH	dist=85630;dist=53078	NA	NA	ncRNA_exonic	ENSG00000213867	NA	NA	NA	Score=730;Name=lod=1230	NA	14q12	NA	NA	NA	NA	rs8004725	0.18	0.18	0.174	0.208866	0.0984	0.374	0.0634	0.1725	0.3047	0.09	0.38	0.08	0.16	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.340011	NA	0.02	NA	NA	NA	0.21	NA	4.9016
1162	15	101098922	101098922	T	C	ncRNA_exonic	PRKXP1	NA	NA	NA	ncRNA_exonic	ENSG00000259205,ENSG00000259540	NA	NA	NA	Score=571;Name=lod=278	NA	15q26.3	NA	NA	NA	NA	rs9920217	0.76	0.76	0.761	0.750399	0.7654	0.5784	0.8285	0.8472	0.726	0.78	0.58	0.84	0.88	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.164661	NA	NA	NA	NA	NA	0.754	NA	4.9012666
1162	16	19557267	19557267	C	T	intronic	CCP110	NA	NA	NA	intronic	ENSG00000103540	NA	NA	NA	NA	NA	16p12.3	Score=810;Name=V$CART1_01	NA	NA	NA	rs2301688	0.16	0.16	0.13	0.146166	0.0537	0.3512	0.2363	0.0454	0.1022	0.05	0.35	0.19	0.07	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.868999	NA	NA	0.045054	0.060694	NA	0.109	NA	4.901246
1162	15	101717680	101717680	G	T	exonic	CHSY1	NA	synonymous SNV	CHSY1:NM_014918:exon3:c.C2322A:p.T774T	exonic	ENSG00000131873	NA	synonymous SNV	ENSG00000131873:ENST00000254190:exon3:c.C2322A:p.T774T	NA	NA	15q26.3	Score=825;Name=V$AP4_01	NA	NA	NA	rs8024370	0.73	0.73	0.738	0.759784	0.5557	0.8958	0.6412	0.8994	0.7249	0.55	0.91	0.65	0.86	0.6468	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.129804	NA	NA	0.56314	0.863141	NA	0.797	NA	4.9010266
1162	1	167778843	167778843	G	A	UTR3	ADCY10	NM_001167749:c.*72C>T,NM_018417:c.*72C>T	NA	NA	UTR3	ENSG00000143199	ENST00000545172:c.*72C>T	NA	NA	NA	NA	1q24.2	NA	NA	Name=5	NA	rs3213588	0.45	0.45	0.474	0.471046	0.4324	0.1766	0.379	0.8374	0.3845	0.44	0.17	0.42	0.81	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.370515	NA	NA	NA	NA	NA	0.486	NA	4.9009334
1162	8	7218805	7218805	A	G	intronic	ZNF705G	NA	NA	NA	intronic	ENSG00000215372	NA	NA	NA	NA	NA	8p23.1	NA	NA	Name=17	NA	rs71511225	0.03	0.03	0.022	0.0251597	0.0467	0.0109	0.0447	0.0212	0.0092	0.04	0.01	0.06	0.03	0.0283	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.764821	NA	NA	0.024214	0.013413	NA	0.036	NA	4.900786
1162	15	40589002	40589002	A	G	exonic	PLCB2	NA	synonymous SNV	PLCB2:NM_004573:exon14:c.T1431C:p.T477T	exonic	ENSG00000137841	NA	synonymous SNV	ENSG00000137841:ENST00000260402:exon14:c.T1431C:p.T477T,ENSG00000137841:ENST00000456256:exon14:c.T1431C:p.T477T,ENSG00000137841:ENST00000557821:exon14:c.T1431C:p.T477T,ENSG00000137841:ENST00000558588:exon14:c.T1431C:p.T477T	NA	NA	15q15.1	NA	NA	NA	NA	rs2229691	0.36	0.36	0.279	0.355232	0.2167	0.6736	0.4755	0.1293	0.3896	0.22	0.7	0.42	0.13	0.3172	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.958182	NA	NA	0.23216	0.16597	NA	0.261	NA	4.9006066
1162	7	53255748	53255748	A	G	intergenic	POM121L12,FLJ45974	dist=151130;dist=467454	NA	NA	ncRNA_exonic	ENSG00000227344	NA	NA	NA	Score=564;Name=lod=262	NA	7p12.1	NA	NA	NA	NA	rs73114782	0.08	0.08	0.052	0.0798722	0.0994	0.004	0.1369	0.0809	0.0961	0.11	0.0017	0.12	0.08	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.512665	NA	NA	NA	NA	NA	0.08	NA	4.9006
1162	7	53256063	53256063	C	T	intergenic	POM121L12,FLJ45974	dist=151445;dist=467139	NA	NA	ncRNA_exonic	ENSG00000227344	NA	NA	NA	Score=564;Name=lod=262	NA	7p12.1	NA	NA	NA	NA	rs11978966	0.09	0.09	0.079	0.0996406	0.0994	0.004	0.1398	0.1543	0.0961	0.11	0.0017	0.12	0.15	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.596791	NA	NA	NA	NA	NA	0.116	NA	4.9006
1162	7	53256518	53256518	T	C	intergenic	POM121L12,FLJ45974	dist=151900;dist=466684	NA	NA	ncRNA_exonic	ENSG00000227344	NA	NA	NA	Score=355;Name=lod=37	NA	7p12.1	NA	NA	NA	NA	rs111770589	0.08	0.08	0.054	0.0798722	0.0994	0.004	0.1369	0.0809	0.0961	0.11	0.0017	0.12	0.08	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.537471	NA	NA	NA	NA	NA	0.08	NA	4.9006
1162	7	138441083	138441083	A	C	intronic	ATP6V0A4	NA	NA	NA	intronic	ENSG00000105929	NA	NA	NA	NA	NA	7q34	NA	NA	Name=20	NA	rs11764089	0.05	0.05	0.036	0.043131	0.0994	0.001	0.0288	0.0061	0.089	0.11	NA	0.03	0.0041	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.928084	NA	NA	NA	NA	NA	0.007	NA	4.9006
1162	10	93426604	93426604	T	C	intergenic	PPP1R3C,TNKS2	dist=33746;dist=131547	NA	NA	ncRNA_exonic	ENSG00000213449	NA	NA	NA	Score=652;Name=lod=594	NA	10q23.32	NA	NA	NA	NA	rs61876134	0.06	0.06	0.046	0.0593051	0.0994	0.0099	0.062	0.0651	0.0593	0.09	0.01	0.06	0.08	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.759303	NA	NA	NA	NA	NA	0.022	NA	4.9006
1162	10	93427398	93427398	G	A	intergenic	PPP1R3C,TNKS2	dist=34540;dist=130753	NA	NA	ncRNA_exonic	ENSG00000213449	NA	NA	NA	Score=681;Name=lod=778	NA	10q23.32	NA	NA	NA	NA	rs61876136	0.06	0.06	0.057	0.0593051	0.0994	0.0099	0.062	0.0651	0.0593	0.09	0.01	0.06	0.08	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.590622	NA	NA	NA	NA	NA	0.022	NA	4.9006
1162	12	78388720	78388720	C	T	intronic	NAV3	NA	NA	NA	intronic	ENSG00000067798	NA	NA	NA	Score=431;Name=lod=75	NA	12q21.2	NA	NA	NA	NA	rs1677884	0.14	0.14	0.13	0.127995	0.0994	0.3155	0.0951	0.0166	0.138	0.1	0.32	0.1	0.02	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.376266	1.376266	NA	NA	NA	NA	0.254	NA	4.9006
1162	11	100226962	100226962	C	T	UTR3	CNTN5	NM_001243270:c.*11C>T,NM_014361:c.*11C>T,NM_175566:c.*11C>T	NA	NA	UTR3	ENSG00000149972	ENST00000524871:c.*11C>T,ENST00000528682:c.*11C>T,ENST00000418526:c.*11C>T	NA	NA	NA	NA	11q22.1	NA	NA	Name=6	NA	rs1216182	0.22	0.22	0.219	0.23143	0.1153	0.3224	0.2637	0.1967	0.2812	0.12	0.34	0.24	0.22	0.2154	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.088343	NA	NA	0.102169	0.171915	NA	0.217	NA	4.9004644
1162	1	228412227	228412227	T	C	exonic	OBSCN	NA	synonymous SNV	OBSCN:NM_001098623:exon9:c.T2721C:p.S907S,OBSCN:NM_052843:exon9:c.T2721C:p.S907S,OBSCN:NM_001271223:exon10:c.T2997C:p.S999S	exonic	ENSG00000154358	NA	synonymous SNV	ENSG00000154358:ENST00000284548:exon9:c.T2721C:p.S907S,ENSG00000154358:ENST00000422127:exon9:c.T2721C:p.S907S,ENSG00000154358:ENST00000570156:exon10:c.T2997C:p.S999S	NA	NA	1q42.13	NA	NA	NA	NA	rs1771480	0.39	0.39	NA	0.41254	0.3668	0.3849	0.402	0.5885	0.2577	0.31	0.36	0.38	0.56	0.4	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.801945	NA	NA	NA	NA	NA	0.116	NA	4.8998666
1162	9	131476649	131476649	G	A	intronic	PKN3	NA	NA	NA	intronic	ENSG00000160447	NA	NA	NA	Score=363;Name=lod=40	NA	9q34.11	NA	NA	NA	NA	rs41275914	0.02	0.02	0.013	0.0127796	0.0388	NA	0.0259	0.0023	0.0041	0.04	NA	0.03	0.0041	0.0246	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.858566	NA	NA	0.036744	0.005447	NA	0.043	NA	4.899856
1162	22	36694954	36694954	C	G	intronic	MYH9	NA	NA	NA	intronic	ENSG00000100345	NA	NA	NA	NA	NA	22q12.3	NA	NA	NA	NA	rs41279999	0.05	0.05	0.026	0.052516	0.0328	0.1131	0.0245	0.0151	0.0808	0.04	0.1	0.03	0.01	0.0392	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.331299	NA	NA	0.028256	0.022015	NA	0.043	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000037553.1;CLNDSDB=.;CLNDSDBID=.	4.899744
1162	16	23536531	23536531	C	T	intronic	EARS2	NA	NA	NA	exonic	ENSG00000103356	NA	nonsynonymous SNV	ENSG00000103356:ENST00000563232:exon8:c.G1522A:p.E508K	NA	NA	16p12.2	NA	NA	NA	NA	rs75133940	0.05	0.05	0.039	0.029353	0.1014	0.001	0.0418	0.003	0.0112	0.11	0.0017	0.05	0.0041	0.0696	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.599627	2.599627	0.19	0.095996	0.015393	NA	0.036	NA	4.8996707
1162	2	64893194	64893194	A	T	intergenic	SERTAD2,LOC400958	dist=12148;dist=235780	NA	NA	ncRNA_exonic	ENSG00000227791	NA	NA	NA	Score=578;Name=lod=299	NA	2p14	NA	NA	NA	NA	rs116311582	0.06	0.06	0.056	0.0700879	0.1004	0.0337	0.0735	0.003	0.1646	0.12	0.03	0.07	0.01	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.268659	NA	NA	NA	NA	NA	0.029	NA	4.8996
1162	3	170670753	170670753	C	T	intergenic	EIF5A2,SLC2A2	dist=44327;dist=43384	NA	NA	ncRNA_exonic	ENSG00000240704	NA	NA	NA	Score=684;Name=lod=803	NA	3q26.2	NA	NA	NA	NA	rs67125861	0.08	0.08	0.087	0.0826677	0.1004	0.001	0.0908	0.1483	0.0542	0.1	NA	0.1	0.15	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.242767	NA	NA	NA	NA	NA	0.217	NA	4.8996
1162	3	170671389	170671389	C	T	intergenic	EIF5A2,SLC2A2	dist=44963;dist=42748	NA	NA	ncRNA_exonic	ENSG00000240704	NA	NA	NA	Score=546;Name=lod=221	NA	3q26.2	NA	NA	NA	NA	rs58649226	0.09	0.09	0.078	0.0896565	0.1004	0.001	0.0937	0.1732	0.0542	0.1	NA	0.1	0.16	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.867101	NA	NA	NA	NA	NA	0.232	NA	4.8996
1162	19	22654910	22654910	C	T	intergenic	ZNF98,LOC440518	dist=49762;dist=124149	NA	NA	ncRNA_exonic	ENSG00000269138	NA	NA	NA	Score=300;Name=lod=22	NA	19p12	NA	NA	NA	NA	rs73924019	0.08	0.08	0.066	0.0964457	0.1004	0.119	0.0764	0.0477	0.1493	0.09	0.09	0.1	0.05	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.283089	NA	NA	NA	NA	NA	0.022	NA	4.8996
1162	22	32666596	32666596	G	A	intergenic	SLC5A4,RFPL3	dist=15278;dist=84276	NA	NA	ncRNA_exonic	ENSG00000214076	NA	NA	NA	Score=667;Name=lod=688	NA	22q12.3	NA	NA	NA	NA	rs73164068	0.15	0.15	0.155	0.146565	0.1004	0.3353	0.1037	0.0083	0.2168	0.1	0.36	0.11	0.01	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.358216	NA	NA	NA	NA	NA	0.167	NA	4.8996
1162	2	202173812	202173812	C	A	intronic	ALS2CR12	NA	NA	NA	intronic	ENSG00000155749	NA	NA	NA	NA	NA	2q33.1	NA	Name=MafF_(M8194),MafK_(SC-477),MafK_(ab50322)	NA	NA	rs16837131	0.1	0.1	0.098	0.106829	0.1004	0.0079	0.0764	0.233	0.0665	0.1	0.0017	0.08	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.831552	NA	NA	NA	NA	NA	0.116	NA	4.8996
1162	8	69730488	69730488	G	C	UTR3	C8orf34	NM_052958:c.*7G>C	NA	NA	UTR3	ENSG00000165084	ENST00000539993:c.*7G>C,ENST00000518698:c.*7G>C,ENST00000337103:c.*7G>C,ENST00000521406:c.*757G>C	NA	NA	Score=358;Name=lod=38	NA	8q13.2	NA	NA	NA	NA	rs16935109	0.19	0.19	0.195	0.21845	0.1282	0.4276	0.1311	0.1225	0.2873	0.12	0.41	0.11	0.11	0.1744	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.340768	1.340768	NA	0.131279	0.13005	ID=COSN168341;OCCURENCE=1(large_intestine)	0.138	NA	4.8994544
1162	11	113133676	113133676	T	G	UTR3	NCAM1	NM_001242608:c.*29T>G,NM_001076682:c.*29T>G	NA	NA	UTR3	ENSG00000149294	ENST00000533760:c.*29T>G,ENST00000534015:c.*29T>G,ENST00000531817:c.*586T>G	NA	NA	NA	NA	11q23.2	Score=810;Name=V$PPARG_03	NA	NA	NA	rs2288158	0.16	0.16	0.152	0.158546	0.1153	0.2996	0.1066	0.093	0.183	0.12	0.3	0.12	0.07	0.1765	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.635457	2.635457	NA	0.142092	0.10298	NA	0.145	NA	4.8994414
1162	2	15747393	15747393	C	T	exonic	DDX1	NA	synonymous SNV	DDX1:NM_004939:exon13:c.C912T:p.N304N	exonic	ENSG00000079785	NA	synonymous SNV	ENSG00000079785:ENST00000233084:exon13:c.C912T:p.N304N,ENSG00000079785:ENST00000381341:exon14:c.C912T:p.N304N	Score=549;Name=lod=228	NA	2p24.3	NA	NA	NA	NA	rs10929378	0.71	0.71	0.744	0.744808	0.5497	0.869	0.6196	0.8389	0.7791	0.55	0.88	0.61	0.84	0.6428	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.146107	NA	NA	0.574884	0.808897	NA	0.71	NA	4.8992826
1162	17	56294141	56294141	C	T	intronic	MKS1	NA	NA	NA	intronic	ENSG00000011143	NA	NA	NA	NA	NA	17q22	NA	NA	NA	NA	rs73329636	0.06	0.06	0.064	0.0603035	0.0298	0.0069	0.036	0.174	0.0102	0.03	0.01	0.05	0.17	0.0407	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.362245	NA	NA	0.030696	0.142185	NA	0.072	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000114213.2;CLNDSDB=.;CLNDSDBID=.	4.898804
1162	1	6147407	6147407	C	T	intronic	KCNAB2	NA	NA	NA	intronic	ENSG00000069424	NA	NA	NA	NA	NA	1p36.31	NA	Name=USF-1	NA	NA	rs4908763	0.13	0.13	0.114	0.149361	0.1014	0.0893	0.1383	0.2489	0.1339	0.11	0.07	0.15	0.23	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.747612	NA	NA	NA	NA	NA	0.196	NA	4.8986
1162	1	196920148	196920148	C	T	exonic	CFHR2	NA	synonymous SNV	CFHR2:NM_005666:exon3:c.C420T:p.C140C	exonic	ENSG00000080910	NA	synonymous SNV	ENSG00000080910:ENST00000367415:exon3:c.C420T:p.C140C,ENSG00000080910:ENST00000367421:exon3:c.C420T:p.C140C	NA	NA	1q31.3	NA	NA	NA	NA	rs4085749	0.33	0.33	0.274	0.32488	0.2505	0.7024	0.464	0.0272	0.316	0.24	0.68	0.38	0.03	0.2962	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.208393	NA	NA	0.221395	0.070586	NA	0.225	NA	4.8985716
1162	1	221058059	221058059	C	T	UTR3	HLX	NM_021958:c.*13C>T	NA	NA	UTR3	ENSG00000136630	ENST00000366903:c.*13C>T,ENST00000549319:c.*13C>T	NA	NA	NA	NA	1q41	NA	Name=SUZ12	NA	NA	rs2738756	0.13	0.13	0.135	0.111821	0.162	0.001	0.111	0.2103	0.0419	0.16	NA	0.12	0.23	0.1327	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.513925	NA	NA	0.140959	0.177594	NA	0.13	NA	4.8976744
1162	1	192216500	192216500	C	A	intergenic	RGS18,RGS21	dist=61555;dist=69622	NA	NA	ncRNA_exonic	ENSG00000226723	NA	NA	NA	Score=837;Name=lod=3357	NA	1q31.2	NA	NA	NA	NA	rs1175146	0.09	0.09	0.075	0.0824681	0.1024	NA	0.0663	0.1641	0.0481	0.11	NA	0.08	0.16	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.043155	NA	NA	NA	NA	NA	0.123	NA	4.8976
1162	19	40449191	40449191	T	C	intergenic	FCGBP,PSMC4	dist=8658;dist=27721	NA	NA	ncRNA_exonic	ENSG00000187534	NA	NA	NA	Score=483;Name=lod=122	NA	19q13.2	NA	NA	NA	NA	rs3826919	0.23	0.23	0.244	0.251597	0.1024	0.2381	0.1009	0.4879	0.2065	0.09	0.26	0.13	0.5	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.320119	NA	NA	NA	NA	NA	0.362	NA	4.8976
1162	21	38444890	38444890	A	G	UTR5	PIGP	NM_153681:c.-3T>C	NA	NA	UTR5	ENSG00000185808	ENST00000464265:c.-3T>C,ENST00000430792:c.-442T>C	NA	NA	NA	NA	21q22.13	NA	Name=TBP,CCNT2,AP-2gamma,HA-E2F1,E2F1,Pol2-4H8,Egr-1,Ini1,YY1,YY1_(C-20),E2F6,Pol2,HMGN3,E2F6_(H-50),TAF1	Name=136	NA	rs2298682	0.39	0.39	0.374	0.375	0.495	0.381	0.3458	0.2882	0.3834	0.5	0.36	0.36	0.29	0.438	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.929712	1.929712	NA	0.50314	0.300499	NA	0.304	NA	4.8971934
1162	10	99126249	99126249	G	A	exonic	RRP12	NA	synonymous SNV	RRP12:NM_001145114:exon26:c.C3162T:p.D1054D,RRP12:NM_015179:exon28:c.C3345T:p.D1115D	exonic	ENSG00000052749	NA	synonymous SNV	ENSG00000052749:ENST00000536831:exon22:c.C2499T:p.D833D,ENSG00000052749:ENST00000315563:exon25:c.C3045T:p.D1015D,ENSG00000052749:ENST00000414986:exon26:c.C3162T:p.D1054D,ENSG00000052749:ENST00000370992:exon28:c.C3345T:p.D1115D	NA	NA	10q24.1	NA	NA	NA	NA	rs2275581	0.25	0.25	0.268	0.272963	0.2584	0.3095	0.2622	0.1815	0.3814	0.25	0.28	0.26	0.18	0.2608	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.766877	NA	NA	0.250349	0.182705	NA	0.21	NA	4.8971176
1162	2	69304719	69304719	T	C	intronic	ANTXR1	NA	NA	NA	intronic	ENSG00000169604	NA	NA	NA	NA	NA	2p13.3	NA	NA	Name=11	NA	rs7424907	0.13	0.13	0.138	0.157548	0.1034	0.2312	0.0836	0.1785	0.1616	0.1	0.17	0.08	0.16	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.65473	NA	NA	NA	NA	NA	0.087	NA	4.8966
1162	4	187557600	187557600	G	A	intronic	FAT1	NA	NA	NA	intronic	ENSG00000083857	NA	NA	NA	NA	NA	4q35.2	NA	NA	Name=7	NA	rs328419	0.12	0.12	0.136	0.114816	0.1034	0.0645	0.0994	0.2042	0.0685	0.11	0.08	0.1	0.2	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.30079	NA	NA	NA	NA	NA	0.159	NA	4.8966
1162	9	19096832	19096832	A	T	intronic	HAUS6	NA	NA	NA	intronic	ENSG00000147874	NA	NA	NA	NA	NA	9p22.1	NA	NA	Name=4	NA	rs4977495	0.12	0.12	0.105	0.114417	0.1034	0.0764	0.2075	0.0855	0.138	0.11	0.09	0.19	0.1	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.759972	NA	NA	NA	NA	ID=COSN168480;OCCURENCE=2(large_intestine)	0.181	NA	4.8966
1162	19	50222914	50222914	G	A	intergenic	CPT1C,TSKS	dist=5926;dist=20097	NA	NA	ncRNA_exonic	ENSG00000243829	NA	NA	NA	Score=770;Name=lod=1803	NA	19q13.33	NA	NA	NA	NA	rs3810261	0.2	0.2	0.199	0.213458	0.1034	0.2897	0.2378	0.2368	0.1994	0.11	0.28	0.2	0.27	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.288393	NA	NA	NA	NA	NA	0.188	NA	4.8966
1162	7	11676377	11676377	G	A	exonic	THSD7A	NA	synonymous SNV	THSD7A:NM_015204:exon2:c.C402T:p.P134P	exonic	ENSG00000005108	NA	synonymous SNV	ENSG00000005108:ENST00000423059:exon2:c.C402T:p.P134P	NA	NA	7p21.3	NA	NA	NA	NA	rs2074598	0.25	0.25	0.264	0.266573	0.2535	0.2837	0.33	0.1649	0.3548	0.26	0.27	0.29	0.21	0.262	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.447502	NA	NA	0.254703	0.145361	NA	0.188	NA	4.8964636
1162	15	90335534	90335534	G	A	exonic	ANPEP	NA	synonymous SNV	ANPEP:NM_001150:exon18:c.C2385T:p.T795T	exonic	ENSG00000166825	NA	synonymous SNV	ENSG00000166825:ENST00000300060:exon18:c.C2385T:p.T795T	NA	NA	15q26.1	NA	NA	NA	NA	rs25652	0.23	0.23	0.221	0.252196	0.2584	0.1766	0.2075	0.27	0.3313	0.26	0.19	0.2	0.24	0.2457	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.373588	NA	NA	0.266108	0.254545	NA	0.29	NA	4.8964586
1162	14	35408648	35408648	A	G	upstream	IGBP1P1	NA	NA	NA	ncRNA_exonic	ENSG00000226677	NA	NA	NA	Score=272;Name=lod=17	NA	14q13.2	NA	NA	NA	NA	rs28373355	0.31	0.31	0.277	0.305112	0.2704	0.37	0.2824	0.2837	0.319	0.28	0.38	0.25	0.32	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.032622	NA	NA	NA	NA	NA	0.254	NA	4.8962666
1162	15	58004423	58004423	G	A	intronic	GCOM1,POLR2M	NA	NA	NA	intronic	ENSG00000137878,ENSG00000255529	NA	NA	NA	NA	NA	15q21.3	Score=839;Name=V$FAC1_01	NA	NA	NA	rs117810557	0.02	0.02	0.017	0.0115815	0.0398	NA	0.0159	0.0008	0.0061	0.04	NA	0.01	0.002	0.0299	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.456487	NA	NA	0.034189	0.007094	NA	0.022	NA	4.896111
1162	5	67569746	67569746	G	A	intronic	PIK3R1	NA	NA	NA	intronic	ENSG00000145675	NA	NA	NA	NA	NA	5q13.1	NA	Name=POU2F2,Pol2-4H8,Pol2,Oct-2,TBP,p300	Name=21	NA	rs171649	0.3	0.3	0.263	0.28734	0.3748	0.3621	0.4207	0.0272	0.3773	0.39	0.39	0.36	0.04	0.3622	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.109297	NA	NA	0.366977	0.07921	NA	0.312	NA	4.896023
1162	12	30868002	30868002	C	T	exonic	CAPRIN2	NA	synonymous SNV	CAPRIN2:NM_001206856:exon14:c.G2373A:p.V791V,CAPRIN2:NM_023925:exon14:c.G2391A:p.V797V,CAPRIN2:NM_001002259:exon15:c.G2541A:p.V847V,CAPRIN2:NM_032156:exon15:c.G2538A:p.V846V	exonic	ENSG00000110888	NA	synonymous SNV	ENSG00000110888:ENST00000433722:exon12:c.G1776A:p.V592V,ENSG00000110888:ENST00000298892:exon14:c.G2391A:p.V797V,ENSG00000110888:ENST00000308433:exon14:c.G1539A:p.V513V,ENSG00000110888:ENST00000395805:exon14:c.G2373A:p.V791V,ENSG00000110888:ENST00000251071:exon15:c.G2541A:p.V847V,ENSG00000110888:ENST00000417045:exon15:c.G2538A:p.V846V	Score=597;Name=lod=356	NA	12p11.21	NA	NA	NA	NA	rs13656	0.57	0.57	0.598	0.596046	0.5905	0.4633	0.3818	0.8729	0.5164	0.59	0.46	0.38	0.82	0.58	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.212891	NA	NA	0.600233	0.825465	NA	0.543	NA	4.8959336
1162	5	16902701	16902701	T	A	intronic	MYO10	NA	NA	NA	ncRNA_exonic	ENSG00000243538	NA	NA	NA	Score=721;Name=lod=1136	NA	5p15.1	NA	NA	NA	NA	rs2562358	0.49	0.49	0.397	0.472444	0.4374	0.5308	0.6254	0.4629	0.3528	0.44	0.53	0.57	0.45	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.212943	NA	NA	NA	NA	NA	0.297	NA	4.8959333
1162	13	52585548	52585548	G	T	UTR5	ATP7B	NM_000053:c.-75C>A,NM_001243182:c.-75C>A,NM_001005918:c.-75C>A	NA	NA	UTR5	ENSG00000123191	ENST00000242839:c.-75C>A,ENST00000344297:c.-75C>A,ENST00000400366:c.-75C>A	NA	NA	NA	NA	13q14.3	NA	Name=CTCF,Pol2,USF-1,HEY1	Name=15	NA	rs2277448	0.56	0.56	0.518	0.516773	0.7227	0.5952	0.6427	0.2239	0.5307	0.71	0.58	0.68	0.22	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.965822	NA	NA	0.714959	0.319364	NA	0.536	NA	4.8956744
1162	7	47977302	47977302	C	T	intronic	PKD1L1	NA	NA	NA	intronic	ENSG00000136273,ENSG00000158683	NA	NA	NA	NA	NA	7p12.3	NA	Name=EBF1_(C-8)	NA	NA	rs80325961	0.05	0.05	0.041	0.033746	0.1044	NA	0.0432	0.0038	0.0297	0.1	NA	0.06	0.01	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.905524	NA	NA	NA	NA	NA	0.116	NA	4.8956
1162	15	91428188	91428188	A	G	intronic	FES	NA	NA	NA	intronic	ENSG00000182511	NA	NA	NA	NA	NA	15q26.1	NA	NA	Name=9	NA	rs76642265	0.07	0.07	0.062	0.0700879	0.1044	0.003	0.0519	0.1029	0.0726	0.11	NA	0.05	0.09	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.624459	NA	NA	NA	NA	NA	0.065	NA	4.8956
1162	5	176024880	176024880	C	T	exonic	GPRIN1	NA	synonymous SNV	GPRIN1:NM_052899:exon2:c.G1956A:p.G652G	exonic	ENSG00000169258	NA	synonymous SNV	ENSG00000169258:ENST00000303991:exon2:c.G1956A:p.G652G	NA	NA	5q35.2	NA	Name=Rad21,CTCF,CTCF_(SC-5916)	Name=5	NA	rs4868663	0.85	0.85	0.819	0.827276	0.9304	0.7887	0.8977	0.7398	0.8292	0.93	0.79	0.93	0.73	0.8991	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.002493	NA	NA	0.941977	0.794598	NA	0.768	NA	4.8951896
1163	7	107341528	107341528	T	A	intronic	SLC26A4	NA	NA	NA	intronic	ENSG00000091137	NA	NA	NA	Score=561;Name=lod=253	NA	7q22.3	NA	NA	NA	NA	rs55701254	0.02	0.02	0.013	0.0131789	0.0497	NA	0.0101	0.0023	0.0061	0.05	NA	0.01	NA	0.0252	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.211894	3.211894	NA	0.030123	0.006582	NA	NA	NA	4.894977
1163	7	66409881	66409881	A	G	intronic	TMEM248	NA	NA	NA	intronic	ENSG00000106609	NA	NA	NA	NA	NA	7q11.21	NA	NA	Name=3	NA	rs35111158	0.12	0.12	0.084	0.133586	0.1054	0.1409	0.2104	0.0567	0.2045	0.1	0.17	0.18	0.04	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.623452	NA	NA	NA	NA	NA	0.188	NA	4.8946
1163	14	52755385	52755385	C	T	intergenic	PTGDR,PTGER2	dist=11943;dist=25631	NA	NA	ncRNA_exonic	ENSG00000261208	NA	NA	NA	Score=480;Name=lod=119	NA	14q22.1	NA	NA	NA	NA	rs17831706	0.09	0.09	0.096	0.113818	0.1054	0.124	0.0591	0.087	0.1871	0.1	0.1	0.06	0.1	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.490562	1.490562	NA	NA	NA	NA	0.051	NA	4.8946
1163	15	90347338	90347338	T	C	intronic	ANPEP	NA	NA	NA	intronic	ENSG00000166825	NA	NA	NA	NA	NA	15q26.1	NA	NA	Name=13	NA	rs41276914	0.08	0.08	0.073	0.0680911	0.1054	0.002	0.0476	0.0915	0.0808	0.11	0.01	0.04	0.14	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.271994	NA	NA	NA	NA	NA	0.13	NA	4.8946
1163	20	56185132	56185132	G	A	intronic	ZBP1	NA	NA	NA	intronic	ENSG00000124256	NA	NA	NA	NA	NA	20q13.31	NA	Name=CTCF	NA	NA	rs742724	0.14	0.14	0.148	0.173522	0.1054	0.1389	0.1354	0.2352	0.2229	0.1	0.11	0.13	0.24	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.483794	NA	NA	NA	NA	NA	0.203	NA	4.8946
1163	22	50719251	50719251	A	G	exonic	PLXNB2	NA	synonymous SNV	PLXNB2:NM_012401:exon24:c.T3915C:p.P1305P	exonic	ENSG00000196576	NA	synonymous SNV	ENSG00000196576:ENST00000359337:exon24:c.T3915C:p.P1305P,ENSG00000196576:ENST00000449103:exon24:c.T3915C:p.P1305P	NA	NA	22q13.33	Score=805;Name=V$PAX5_01	NA	NA	NA	rs11547734	0.6	0.6	0.56	0.616414	0.5875	0.6111	0.5317	0.6641	0.6472	0.59	0.61	0.51	0.66	0.5969	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.254209	NA	NA	0.588039	0.644072	NA	0.37	NA	4.8942276
1163	22	43089055	43089055	G	C	exonic	A4GALT	NA	synonymous SNV	A4GALT:NM_017436:exon3:c.C903G:p.P301P	exonic	ENSG00000128274	NA	synonymous SNV	ENSG00000128274:ENST00000249005:exon2:c.C903G:p.P301P,ENSG00000128274:ENST00000381278:exon2:c.C903G:p.P301P,ENSG00000128274:ENST00000401850:exon2:c.C903G:p.P301P	NA	NA	22q13.2	Score=830;Name=V$TAXCREB_01	NA	NA	NA	rs6002904	0.68	0.68	0.686	0.695288	0.5915	0.7063	0.6052	0.8608	0.6309	0.59	0.66	0.64	0.86	0.613	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.056255	NA	NA	0.568023	0.819709	NA	0.71	NA	4.8941436
1163	1	163208383	163208383	G	A	intronic	RGS5	NA	NA	NA	ncRNA_exonic	ENSG00000225755	NA	NA	NA	Score=545;Name=lod=219	NA	1q23.3	NA	NA	NA	NA	rs4657254	0.35	0.35	0.354	0.350439	0.4394	0.1905	0.3559	0.4365	0.3037	0.45	0.18	0.35	0.41	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.182665	NA	NA	NA	NA	NA	0.326	NA	4.8939333
1163	7	65404092	65404092	A	T	intronic	VKORC1L1	NA	NA	NA	intronic	ENSG00000196715	NA	NA	NA	Score=650;Name=lod=584	NA	7q11.21	NA	NA	NA	NA	rs34560516	0.12	0.12	0.098	0.14357	0.1064	0.1468	0.2133	0.0893	0.2025	0.09	0.18	0.18	0.06	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.759845	NA	NA	NA	NA	NA	0.203	NA	4.8936
1163	16	16025750	16025750	T	C	intergenic	FOPNL,ABCC1	dist=43303;dist=17684	NA	NA	ncRNA_exonic	ENSG00000215003	NA	NA	NA	Score=784;Name=lod=2054	NA	16p13.11	NA	NA	NA	NA	rs12924488	0.04	0.04	0.03	0.0335463	0.1064	NA	0.0432	0.0023	0.0286	0.11	NA	0.04	NA	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.955405	1.955405	0.19	NA	NA	NA	0.036	NA	4.8936
1163	7	142231625	142231625	C	A	intergenic	LOC730441,MTRNR2L6	dist=259557;dist=142506	NA	NA	exonic	ENSG00000211717	NA	stopgain	ENSG00000211717:ENST00000390364:exon2:c.G292T:p.E98X	NA	NA	7q34	NA	NA	Name=2	NA	rs17249	0.28	0.28	0.256	0.248602	0.4384	0.2004	0.33	0.1611	0.1636	0.44	0.15	0.33	0.16	0.3736	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.576573	2.576573	0.02	0.461602	0.217434	NA	0.239	NA	4.8930647
1163	12	15090837	15090837	A	G	intronic	ERP27	NA	NA	NA	intronic	ENSG00000139055	NA	NA	NA	NA	NA	12p12.3	NA	Name=SMC3_(ab9263),CTCF,Rad21,CTCF_(SC-5916),CTCF_(C-20)	Name=27	NA	rs3748297	0.28	0.28	0.267	0.285743	0.3807	0.125	0.3876	0.2776	0.2924	0.36	0.11	0.39	0.29	0.3334	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.914477	NA	NA	0.393023	0.289832	ID=COSN164179;OCCURENCE=1(breast)	0.362	NA	4.892877
1163	1	12398413	12398413	T	G	intronic	VPS13D	NA	NA	NA	intronic	ENSG00000048707	NA	NA	NA	NA	NA	1p36.22	Score=748;Name=V$MEF2_04	NA	NA	NA	rs76314308	0.06	0.06	0.044	0.0776757	0.0209	0.0198	0.1254	0.143	0.0736	0.03	0.01	0.11	0.13	0.0574	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.641271	1.641271	NA	0.028837	0.115978	NA	0.058	NA	4.892863
1163	3	11915154	11915154	A	G	intergenic	TAMM41,SYN2	dist=26802;dist=130708	NA	NA	ncRNA_exonic	ENSG00000230342	NA	NA	NA	Score=568;Name=lod=271	NA	3p25.2	NA	NA	NA	NA	rs3732701	0.17	0.17	0.139	0.147764	0.1074	0.3363	0.1427	0.0802	0.09	0.12	0.32	0.13	0.09	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.754794	NA	NA	NA	NA	NA	0.145	NA	4.8926
1163	3	87679657	87679657	G	A	intergenic	POU1F1,HTR1F	dist=353920;dist=352069	NA	NA	ncRNA_exonic	ENSG00000240255	NA	NA	NA	Score=844;Name=lod=3580	NA	3p11.2	NA	NA	NA	NA	rs76214106	0.08	0.08	0.067	0.0714856	0.1074	0.0565	0.072	0.0605	0.0644	0.09	0.04	0.08	0.08	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.161085	NA	NA	NA	NA	NA	0.029	NA	4.8926
1163	11	77705536	77705536	C	A	intronic	INTS4	NA	NA	NA	intronic	ENSG00000149262	NA	NA	NA	NA	NA	11q14.1	NA	Name=Sin3Ak-20,TCF4,SP1,Pol2,ETS1	NA	NA	rs2016147	0.19	0.19	0.19	0.183906	0.1074	0.244	0.1715	0.2352	0.1401	0.11	0.28	0.15	0.24	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.655985	NA	NA	NA	NA	NA	0.203	NA	4.8926
1163	12	43030796	43030796	G	A	intergenic	PRICKLE1,ADAMTS20	dist=47224;dist=717216	NA	NA	ncRNA_exonic	ENSG00000257405	NA	NA	NA	Score=586;Name=lod=322	NA	12q12	NA	NA	NA	NA	rs79463838	0.12	0.12	0.112	0.107628	0.1074	0.2272	0.0807	0.0091	0.137	0.1	0.26	0.07	0.02	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.218563	NA	NA	NA	NA	NA	0.058	NA	4.8926
1163	13	50501980	50501980	G	A	intronic	SPRYD7	NA	NA	NA	intronic	ENSG00000123178	NA	NA	NA	NA	NA	13q14.2	NA	NA	Name=75	NA	rs11617754	0.27	0.27	0.243	0.326677	0.1074	0.6766	0.2435	0.2209	0.3937	0.11	0.6	0.2	0.2	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.186886	2.186886	NA	NA	NA	NA	0.203	NA	4.8926
1163	19	29282897	29282897	G	A	intergenic	LINC00662,LOC148145	dist=998049;dist=173141	NA	NA	ncRNA_exonic	ENSG00000267799	NA	NA	NA	Score=655;Name=lod=612	NA	19q12	NA	NA	NA	NA	rs58334655	0.24	0.24	0.237	0.221645	0.1074	0.4296	0.1974	0.2277	0.1339	0.12	0.44	0.19	0.25	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.594786	NA	NA	NA	NA	ID=COSN165778;OCCURENCE=1(NS)	0.116	NA	4.8926
1163	19	54734002	54734002	T	C	intergenic	LILRB3,LILRA6	dist=7043;dist=6467	NA	NA	ncRNA_exonic	ENSG00000235081	NA	NA	NA	Score=569;Name=lod=273	NA	19q13.42	NA	NA	NA	NA	rs113651912	0.05	0.05	0.037	0.0439297	0.1074	NA	0.1124	0.0045	0.0286	0.1	NA	0.08	0.01	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.795715	NA	NA	NA	NA	NA	0.043	NA	4.8926
1163	X	1414419	1414419	G	A	intronic	CSF2RA	NA	NA	NA	intronic	ENSG00000198223	NA	NA	NA	Score=391;Name=lod=52	NA	Xp22.33	NA	NA	NA	NA	rs28565146	0.14	0.14	0.11129	NA	NA	NA	NA	NA	NA	0.11	0.18	0.25	0.05	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.01865	NA	NA	0.10748	0.056358	NA	NA	NA	4.89252
1163	2	130951581	130951581	A	G	exonic	TUBA3E	NA	synonymous SNV	TUBA3E:NM_207312:exon4:c.T834C:p.A278A	exonic	ENSG00000152086	NA	synonymous SNV	ENSG00000152086:ENST00000312988:exon4:c.T834C:p.A278A	NA	NA	2q21.1	NA	NA	NA	NA	rs1052312	0.42	0.42	0.34	0.46885	0.3628	0.4365	0.5014	0.587	0.4284	0.32	0.42	0.46	0.56	0.4116	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.590021	NA	NA	NA	NA	NA	0.449	NA	4.8922666
1163	12	4461485	4461485	G	A	exonic	C12orf5	NA	synonymous SNV	C12orf5:NM_020375:exon6:c.G441A:p.A147A	exonic	ENSG00000078237	NA	synonymous SNV	ENSG00000078237:ENST00000179259:exon6:c.G441A:p.A147A	NA	NA	12p13.32	NA	NA	NA	NA	rs7133330	0.19	0.19	0.17	0.183307	0.2714	0.1577	0.2839	0.0832	0.183	0.27	0.12	0.25	0.11	0.2357	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.24586	NA	NA	0.267674	0.11212	NA	0.145	NA	4.8918926
1163	11	130416921	130416921	C	T	intergenic	ADAMTS15,C11orf44	dist=70382;dist=125930	NA	NA	ncRNA_exonic	ENSG00000236616	NA	NA	NA	Score=385;Name=lod=49	NA	11q24.3	NA	NA	NA	NA	rs2640218	0.06	0.06	0.053	0.043131	0.1083	0.001	0.0605	0.0136	0.047	0.12	0.0017	0.07	0.02	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.58282	NA	NA	NA	NA	NA	0.029	NA	4.8917
1163	15	89869733	89869733	A	G	intronic	POLG	NA	NA	NA	intronic	ENSG00000140521	NA	NA	NA	NA	NA	15q26.1	NA	Name=CTCF	NA	NA	rs2351000	0.19	0.19	0.202	0.22504	0.1083	0.003	0.1124	0.5938	0.1554	0.1	NA	0.13	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.576331	NA	NA	NA	NA	NA	0.232	NA	4.8917
1163	18	57817139	57817139	A	G	intergenic	PMAIP1,MC4R	dist=245601;dist=221425	NA	NA	ncRNA_exonic	ENSG00000242060	NA	NA	NA	Score=803;Name=lod=2440	NA	18q21.32	NA	NA	NA	NA	rs147256003	0.05	0.05	0.039	0.0371406	0.1083	NA	0.0749	0.0061	0.0174	0.09	NA	0.09	0.01	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.317323	NA	NA	NA	NA	NA	0.007	NA	4.8917
1163	13	78216873	78216873	A	G	exonic	SCEL	NA	synonymous SNV	SCEL:NM_001160706:exon30:c.A1854G:p.L618L,SCEL:NM_003843:exon31:c.A1920G:p.L640L,SCEL:NM_144777:exon32:c.A1980G:p.L660L	exonic	ENSG00000136155	NA	synonymous SNV	ENSG00000136155:ENST00000535157:exon30:c.A1854G:p.L618L,ENSG00000136155:ENST00000377246:exon31:c.A1920G:p.L640L,ENSG00000136155:ENST00000349847:exon32:c.A1980G:p.L660L	Score=432;Name=lod=76	NA	13q22.3	NA	NA	NA	NA	rs1053985	0.42	0.42	0.389	0.41234	0.6362	0.1825	0.5562	0.2935	0.4775	0.64	0.15	0.56	0.3	0.5294	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.076312	NA	NA	0.609379	0.331517	ID=COSM147703;OCCURENCE=1(stomach)	0.413	NA	4.8916876
1163	2	171822466	171822466	C	T	exonic	GORASP2	NA	synonymous SNV	GORASP2:NM_001201428:exon10:c.C981T:p.S327S,GORASP2:NM_015530:exon10:c.C1185T:p.S395S	exonic	ENSG00000115806	NA	synonymous SNV	ENSG00000115806:ENST00000234160:exon10:c.C1185T:p.S395S,ENSG00000115806:ENST00000452526:exon11:c.C1221T:p.S407S	NA	Name=Cognitive performance	2q31.1	NA	NA	Name=42	NA	rs4668356	0.86	0.86	0.836	0.840256	0.9344	1	0.902	0.5053	0.9877	0.94	1	0.87	0.56	0.9099	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.261719	NA	NA	0.931047	0.594871	NA	0.768	NA	4.8913196
1163	3	15737698	15737698	T	C	exonic	ANKRD28	NA	synonymous SNV	ANKRD28:NM_001195099:exon13:c.A1050G:p.Q350Q,ANKRD28:NM_001195098:exon15:c.A1050G:p.Q350Q,ANKRD28:NM_015199:exon15:c.A1512G:p.Q504Q	exonic	ENSG00000206560	NA	synonymous SNV	ENSG00000206560:ENST00000451422:exon14:c.A1344G:p.Q448Q,ENSG00000206560:ENST00000383777:exon15:c.A1611G:p.Q537Q,ENSG00000206560:ENST00000399451:exon15:c.A1512G:p.Q504Q,ENSG00000206560:ENST00000412318:exon15:c.A1512G:p.Q504Q	Score=660;Name=lod=642	NA	3p25.1	NA	NA	NA	NA	rs2470549	0.45	0.45	0.412	0.412939	0.6014	0.3522	0.6066	0.1626	0.4826	0.6	0.39	0.62	0.18	0.5857	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.177241	NA	NA	0.588378	0.216066	NA	0.42	NA	4.8911886
1163	8	144658711	144658711	G	A	exonic	NAPRT1	NA	synonymous SNV	NAPRT1:NM_145201:exon7:c.C913T:p.L305L	exonic	ENSG00000147813	NA	synonymous SNV	ENSG00000147813:ENST00000276844:exon7:c.C913T:p.L305L,ENSG00000147813:ENST00000340490:exon7:c.C913T:p.L305L,ENSG00000147813:ENST00000426292:exon7:c.C913T:p.L305L,ENSG00000147813:ENST00000435154:exon7:c.C913T:p.L305L,ENSG00000147813:ENST00000449291:exon7:c.C913T:p.L305L	Score=355;Name=lod=37	NA	8q24.3	NA	NA	NA	NA	rs872935	0.45	0.45	0.417	0.397364	0.6262	0.3938	0.4611	0.1672	0.4315	0.63	0.35	0.55	0.22	0.5227	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.644797	NA	NA	0.626628	0.232727	NA	0.413	NA	4.8911386
1163	17	47000251	47000251	C	T	exonic	UBE2Z	NA	synonymous SNV	UBE2Z:NM_023079:exon6:c.C846T:p.Y282Y	exonic	ENSG00000159202	NA	synonymous SNV	ENSG00000159202:ENST00000514948:exon2:c.C114T:p.Y38Y,ENSG00000159202:ENST00000360943:exon6:c.C846T:p.Y282Y	Score=648;Name=lod=574	NA	17q21.32	NA	NA	NA	NA	rs1058018	0.62	0.62	0.646	0.634784	0.6044	0.747	0.5187	0.5575	0.7372	0.61	0.74	0.5	0.57	0.5959	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.773449	NA	NA	0.575465	0.544485	NA	0.529	NA	4.8909016
1163	3	192874117	192874117	A	C	intergenic	MB21D2,HRASLS	dist=238167;dist=84800	NA	NA	ncRNA_exonic	ENSG00000236229	NA	NA	NA	Score=789;Name=lod=2135	NA	3q29	NA	NA	NA	NA	rs111517715	0.06	0.06	0.058	0.0758786	0.1093	0.002	0.0893	0.0393	0.1575	0.1	0.01	0.09	0.05	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.252476	NA	NA	NA	NA	NA	0.101	NA	4.8907
1163	15	85189464	85189464	T	G	exonic	WDR73	NA	synonymous SNV	WDR73:NM_032856:exon6:c.A468C:p.R156R	exonic	ENSG00000177082	NA	synonymous SNV	ENSG00000177082:ENST00000434634:exon6:c.A468C:p.R156R	NA	NA	15q25.2	NA	NA	NA	NA	rs2271431	0.18	0.18	0.145	0.147165	0.2734	0.1379	0.1902	0.0287	0.1564	0.28	0.15	0.22	0.02	0.2294	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.705236	NA	NA	0.273185	0.061627	NA	0.174	NA	4.8906816
1163	4	166325757	166325757	G	A	intronic	CPE	NA	NA	NA	ncRNA_exonic	ENSG00000251596	NA	NA	NA	Score=640;Name=lod=531	NA	4q32.3	NA	NA	NA	NA	rs2241814	0.43	0.43	0.451	0.434105	0.4433	0.4623	0.3602	0.4773	0.3896	0.44	0.43	0.37	0.48	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.229171	NA	NA	NA	NA	NA	0.464	NA	4.8900333
1163	19	580575	580575	C	T	intronic	BSG	NA	NA	NA	intronic	ENSG00000172270	NA	NA	NA	NA	NA	19p13.3	NA	Name=ZNF263	NA	NA	rs28992474	0.15	0.15	0.132	0.188898	0.1103	0.2302	0.0908	0.2095	0.2689	0.11	0.2	0.11	0.19	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.033852	NA	NA	NA	NA	NA	0.051	NA	4.8897
1163	19	11227466	11227466	G	T	intronic	LDLR	NA	NA	NA	intronic	ENSG00000130164	NA	NA	NA	NA	NA	19p13.2	NA	Name=Pol2-4H8	NA	NA	rs7259278	0.26	0.26	0.272	0.254593	0.1103	0.3601	0.1326	0.4077	0.1738	0.12	0.37	0.12	0.45	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.398291	NA	NA	NA	NA	NA	0.254	NA	4.8897
1163	1	897730	897730	C	T	intronic	KLHL17	NA	NA	NA	intronic	ENSG00000187961	NA	NA	NA	Score=569;Name=lod=273	NA	1p36.33	NA	NA	NA	NA	rs7549631	0.07	0.07	0.059	0.077476	0.0388	0.0575	0.0735	0.1747	0.0092	0.04	0.06	0.07	0.14	0.0443	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.386067	NA	NA	0.027222	0.161972	NA	0.029	NA	4.889678
1163	5	76721754	76721754	A	G	intronic	PDE8B	NA	NA	NA	intronic	ENSG00000113231	NA	NA	NA	NA	NA	5q13.3	NA	NA	Name=17	NA	rs3816608	0.08	0.08	0.084	0.115615	0.0268	0.0585	0.0807	0.2322	0.1329	0.03	0.06	0.08	0.19	0.0608	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.512957	NA	NA	0.023023	0.209033	ID=COSN167505;OCCURENCE=1(large_intestine)	0.094	NA	4.889377
1163	3	157993838	157993838	G	T	intronic	RSRC1	NA	NA	NA	ncRNA_exonic	ENSG00000241723	NA	NA	NA	Score=770;Name=lod=1798	NA	3q25.32	NA	NA	NA	NA	rs2682405	0.52	0.52	0.518	0.493011	0.4443	0.623	0.4669	0.6021	0.2802	0.44	0.64	0.43	0.58	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.411605	NA	NA	NA	NA	NA	0.522	NA	4.8890333
1163	3	157993937	157993937	G	A	intronic	RSRC1	NA	NA	NA	ncRNA_exonic	ENSG00000241723	NA	NA	NA	Score=770;Name=lod=1798	NA	3q25.32	NA	NA	NA	NA	rs2682404	0.52	0.52	0.528	0.493011	0.4443	0.623	0.4669	0.6021	0.2802	0.44	0.64	0.43	0.58	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.941845	2.941845	NA	NA	NA	NA	0.522	NA	4.8890333
1163	4	166326908	166326908	G	A	intronic	CPE	NA	NA	NA	ncRNA_exonic	ENSG00000251596	NA	NA	NA	Score=728;Name=lod=1208	NA	4q32.3	NA	NA	NA	NA	rs6837954	0.47	0.47	0.48	0.472644	0.4443	0.4603	0.3732	0.6172	0.3896	0.44	0.42	0.39	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.021385	NA	NA	NA	NA	NA	0.514	NA	4.8890333
1163	4	166326932	166326932	A	C	intronic	CPE	NA	NA	NA	ncRNA_exonic	ENSG00000251596	NA	NA	NA	Score=728;Name=lod=1208	NA	4q32.3	NA	NA	NA	NA	rs6837454	0.47	0.47	0.47	0.472843	0.4443	0.4603	0.3732	0.6172	0.3906	0.44	0.42	0.39	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.523941	NA	NA	NA	NA	NA	0.507	NA	4.8890333
1163	4	166327010	166327010	A	G	intronic	CPE	NA	NA	NA	ncRNA_exonic	ENSG00000251596	NA	NA	NA	Score=728;Name=lod=1208	NA	4q32.3	NA	NA	NA	NA	rs934819	0.47	0.47	0.461	0.472843	0.4443	0.4613	0.3732	0.6172	0.3896	0.44	0.43	0.39	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.123224	NA	NA	NA	NA	NA	0.514	NA	4.8890333
1163	11	82924358	82924358	T	C	intronic	ANKRD42	NA	NA	NA	ncRNA_exonic	ENSG00000241020,ENSG00000254551	NA	NA	NA	Score=720;Name=lod=1126	NA	11q14.1	NA	NA	NA	NA	rs617170	0.57	0.57	0.576	0.596046	0.4443	0.6329	0.4669	0.7852	0.5501	0.44	0.63	0.5	0.75	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.510522	1.510522	NA	NA	NA	NA	0.609	NA	4.8890333
1163	4	121958187	121958187	A	G	exonic	NDNF	NA	synonymous SNV	NDNF:NM_024574:exon4:c.T939C:p.D313D	exonic	ENSG00000173376	NA	synonymous SNV	ENSG00000173376:ENST00000379692:exon4:c.T939C:p.D313D	Score=517;Name=lod=169	NA	4q27	NA	NA	NA	NA	rs3822230	0.48	0.48	0.454	0.425319	0.6113	0.6458	0.4726	0.0756	0.4458	0.61	0.65	0.5	0.09	0.5454	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.048705	NA	NA	0.621047	0.16591	ID=COSM1131289;OCCURENCE=1(prostate),1(large_intestine)	0.449	NA	4.8889196
1163	2	191231458	191231458	G	A	exonic	INPP1	NA	synonymous SNV	INPP1:NM_002194:exon4:c.G303A:p.E101E,INPP1:NM_001128928:exon5:c.G303A:p.E101E	exonic	ENSG00000151689	NA	synonymous SNV	ENSG00000151689:ENST00000322522:exon4:c.G303A:p.E101E,ENSG00000151689:ENST00000409027:exon4:c.G303A:p.E101E,ENSG00000151689:ENST00000423767:exon4:c.G303A:p.E101E,ENSG00000151689:ENST00000444194:exon4:c.G303A:p.E101E,ENSG00000151689:ENST00000458647:exon4:c.G303A:p.E101E,ENSG00000151689:ENST00000392329:exon5:c.G303A:p.E101E,ENSG00000151689:ENST00000431594:exon5:c.G303A:p.E101E,ENSG00000151689:ENST00000541441:exon6:c.G303A:p.E101E	Score=361;Name=lod=39	NA	2q32.2	NA	NA	NA	NA	rs11544940	0.7	0.7	0.687	0.691693	0.5775	0.7579	0.7968	0.8147	0.5	0.58	0.76	0.76	0.77	0.6234	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.890613	NA	NA	0.576977	0.781207	NA	0.746	NA	4.8887896
1163	1	41473283	41473283	A	G	intronic	CTPS1	NA	NA	NA	intronic	ENSG00000171793	NA	NA	NA	NA	NA	1p34.2	NA	NA	Name=15	NA	rs41308258	0.11	0.11	0.082	0.117212	0.1113	0.119	0.1657	0.0893	0.1247	0.1	0.13	0.14	0.06	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.733022	NA	NA	NA	NA	NA	0.043	NA	4.8887
1163	13	45169705	45169705	C	T	intergenic	TSC22D1-AS1,LINC00330	dist=15137;dist=203935	NA	NA	ncRNA_exonic	ENSG00000230793	NA	NA	NA	Score=687;Name=lod=825	NA	13q14.11	NA	NA	NA	NA	rs9533924	0.05	0.05	0.045	0.0491214	0.1113	0.001	0.0865	0.0098	0.0613	0.12	NA	0.05	0.01	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.723012	NA	NA	NA	NA	NA	0.13	NA	4.8887
1163	19	20067507	20067507	G	T	intergenic	ZNF93,ZNF682	dist=21125;dist=47720	NA	NA	ncRNA_intronic	ENSG00000267268	NA	NA	NA	NA	NA	19p12	NA	Name=Pol2	NA	NA	rs73532745	0.22	0.22	0.216	0.241214	0.1113	0.1895	0.2262	0.469	0.1309	0.12	0.16	0.2	0.46	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.919498	NA	NA	NA	NA	NA	0.232	NA	4.8887
1163	19	20067562	20067562	A	G	intergenic	ZNF93,ZNF682	dist=21180;dist=47665	NA	NA	ncRNA_exonic	ENSG00000267268	NA	NA	NA	NA	NA	19p12	NA	Name=Pol2,TAF1	NA	NA	rs7259551	0.22	0.22	0.224	0.242412	0.1113	0.1895	0.2262	0.4735	0.1309	0.12	0.16	0.2	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.427702	NA	NA	NA	NA	NA	0.232	NA	4.8887
1163	15	42442422	42442422	T	G	intronic	PLA2G4F	NA	NA	NA	intronic	ENSG00000168907	NA	NA	NA	NA	NA	15q15.1	NA	Name=CTCF,CTCF_(SC-5916)	NA	NA	rs60506946	0.17	0.17	0.15	0.214657	0.0507	0.1131	0.3055	0.4349	0.1258	0.04	0.09	0.25	0.4	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.669463	NA	NA	0.060692	0.383671	NA	0.203	NA	4.888608
1163	1	59142713	59142713	T	C	exonic	MYSM1	NA	synonymous SNV	MYSM1:NM_001085487:exon9:c.A1275G:p.P425P	exonic	ENSG00000162601	NA	synonymous SNV	ENSG00000162601:ENST00000472487:exon9:c.A1275G:p.P425P	Score=701;Name=lod=940	NA	1p32.1	NA	NA	NA	NA	rs579110	0.63	0.63	0.624	0.647364	0.5875	0.629	0.6686	0.7133	0.6237	0.58	0.62	0.67	0.69	0.6118	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.186094	NA	NA	0.578935	0.669551	NA	0.616	NA	4.8884316
1163	3	195935207	195935207	C	G	intronic	ZDHHC19	NA	NA	NA	intronic	ENSG00000163958	NA	NA	NA	NA	NA	3q29	NA	Name=Egr-1,Pol2,E2F6,USF1_(SC-8983),Sin3Ak-20,E2F6_(H-50),USF2,USF-1,IRF1,Max	Name=54	NA	rs12497404	0.52	0.52	0.509	0.546526	0.5696	0.4187	0.5807	0.556	0.6176	0.56	0.37	0.57	0.59	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.482711	1.482711	NA	0.541981	0.540571	NA	0.507	NA	4.888419
1163	7	151064064	151064064	C	T	exonic	NUB1	NA	synonymous SNV	NUB1:NM_001243351:exon9:c.C912T:p.Y304Y,NUB1:NM_016118:exon9:c.C912T:p.Y304Y	exonic	ENSG00000013374	NA	synonymous SNV	ENSG00000013374:ENST00000355851:exon9:c.C840T:p.Y280Y,ENSG00000013374:ENST00000413040:exon9:c.C912T:p.Y304Y,ENSG00000013374:ENST00000566856:exon9:c.C840T:p.Y280Y,ENSG00000013374:ENST00000568733:exon9:c.C912T:p.Y304Y	NA	NA	7q36.1	NA	NA	Name=71	NA	rs386956	0.48	0.48	0.446	0.384385	0.6302	0.4603	0.4553	0.1634	0.3016	0.63	0.51	0.51	0.18	0.5304	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.261714	NA	NA	0.617872	0.212813	ID=COSM1449335;OCCURENCE=1(large_intestine)	0.507	NA	4.8881946
1163	12	117993064	117993064	C	T	exonic	KSR2	NA	synonymous SNV	KSR2:NM_173598:exon9:c.G1341A:p.P447P	exonic	ENSG00000171435	NA	synonymous SNV	ENSG00000171435:ENST00000302438:exon7:c.G519A:p.P173P,ENSG00000171435:ENST00000339824:exon9:c.G1428A:p.P476P,ENSG00000171435:ENST00000425217:exon9:c.G1341A:p.P447P	NA	NA	12q24.22	NA	NA	NA	NA	rs7955803	0.23	0.23	0.236	0.252396	0.2684	0.1587	0.2003	0.2799	0.3323	0.29	0.14	0.21	0.25	0.2544	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.006932	NA	NA	0.255716	0.264289	NA	0.29	NA	4.8881506
1163	5	21196872	21196872	T	C	intergenic	CDH18,GUSBP1	dist=1208519;dist=262717	NA	NA	ncRNA_exonic	ENSG00000248286	NA	NA	NA	Score=284;Name=lod=19	NA	5p14.3	NA	NA	NA	NA	rs77265458	0.06	0.06	0.056	0.0447284	0.1123	0.002	0.0476	0.028	0.0399	0.12	0.0035	0.06	0.04	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.703799	NA	NA	NA	NA	NA	0.138	NA	4.8877
1163	6	12161628	12161628	C	A	intronic	HIVEP1	NA	NA	NA	intronic	ENSG00000095951	NA	NA	NA	NA	NA	6p24.1	NA	NA	Name=5	NA	rs45516292	0.03	0.03	0.029	0.0279553	0.0408	0.0248	0.0418	0.0068	0.0368	0.04	0.02	0.05	0.002	0.0351	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.451402	NA	NA	0.036707	0.012486	NA	0.022	NA	4.887393
1163	14	78028705	78028705	C	T	intronic	SPTLC2	NA	NA	NA	intronic	ENSG00000100596	NA	NA	NA	NA	NA	14q24.3	NA	NA	Name=4	NA	rs45613436	0.03	0.03	0.031	0.0263578	0.0437	0.001	0.0216	0.025	0.0399	0.05	NA	0.03	0.04	0.0339	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.224102	NA	NA	0.035116	0.030413	NA	0.014	NA	4.887284
1163	9	74862294	74862294	T	C	intronic	GDA	NA	NA	NA	intronic	ENSG00000119125	NA	NA	NA	Score=251;Name=lod=14	NA	9q21.13	NA	NA	NA	NA	rs11143199	0.04	0.04	0.033	0.0367412	0.0388	NA	0.036	0.0877	0.0041	0.03	NA	0.05	0.07	0.0312	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.41344	3.41344	NA	0.042927	0.080154	NA	0.058	NA	4.887073
1163	8	87673711	87673711	C	T	intronic	CNGB3	NA	NA	NA	ncRNA_exonic	ENSG00000233915	NA	NA	NA	Score=470;Name=lod=108	NA	8q21.3	NA	NA	NA	NA	rs13268738	0.5	0.5	0.461	0.517971	0.4463	0.6012	0.611	0.3941	0.6074	0.46	0.58	0.54	0.45	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.393391	NA	1	NA	NA	NA	0.565	NA	4.8870333
1163	6	31117695	31117695	G	A	intronic	CCHCR1	NA	NA	NA	intronic	ENSG00000204536	NA	NA	NA	NA	NA	6p21.33	NA	NA	Name=2	NA	rs113932411	0.09	0.09	0.075	0.0788738	0.1133	0.0357	0.1369	0.0567	0.0767	0.12	0.04	0.15	0.05	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.146579	NA	NA	NA	NA	NA	0.051	NA	4.8867
1163	13	45169096	45169096	A	G	intergenic	TSC22D1-AS1,LINC00330	dist=14528;dist=204544	NA	NA	ncRNA_exonic	ENSG00000230793	NA	NA	NA	Score=746;Name=lod=1438	NA	13q14.11	NA	NA	NA	NA	rs9533923	0.06	0.06	0.055	0.0617013	0.1133	0.001	0.0994	0.0499	0.0603	0.12	NA	0.06	0.06	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.528624	NA	NA	NA	NA	NA	0.138	NA	4.8867
1163	2	25303772	25303772	G	A	intronic	EFR3B	NA	NA	NA	ncRNA_exonic	ENSG00000229593	NA	NA	NA	Score=762;Name=lod=1666	NA	2p23.3	NA	NA	NA	NA	rs493090	0.39	0.39	0.356	0.375399	0.4473	0.5139	0.5476	0.0749	0.4427	0.45	0.52	0.49	0.08	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.167119	NA	NA	NA	NA	NA	0.355	NA	4.8860333
1163	1	12921127	12921127	A	G	exonic	PRAMEF2	NA	synonymous SNV	PRAMEF2:NM_023014:exon4:c.A918G:p.L306L	exonic	ENSG00000120952	NA	synonymous SNV	ENSG00000120952:ENST00000240189:exon4:c.A918G:p.L306L	NA	NA	1p36.21	NA	NA	NA	NA	rs12139549	0.3	0.3	0.33	0.322684	0.2604	0.3472	0.2421	0.4349	0.2669	0.27	0.31	0.24	0.38	0.2648	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.675428	NA	NA	0.255527	0.40713	NA	0.029	NA	4.8859396
1163	17	5043254	5043254	T	C	intronic	USP6	NA	NA	NA	intronic	ENSG00000129204	NA	NA	NA	Score=295;Name=lod=21	NA	17p13.2	NA	NA	NA	NA	rs1821722	0.09	0.09	0.076	0.0874601	0.1143	0.1607	0.0634	0.0098	0.1063	0.11	0.14	0.08	0.02	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.517746	NA	NA	NA	NA	NA	0.036	NA	4.8857
1163	19	10102563	10102563	G	A	intronic	COL5A3	NA	NA	NA	intronic	ENSG00000080573	NA	NA	NA	NA	NA	19p13.2	NA	Name=TR4	NA	NA	rs7251451	0.09	0.09	0.091	0.0996406	0.0278	0.0377	0.0648	0.289	0.0061	0.03	0.04	0.06	0.27	0.0532	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.215627	NA	NA	0.033488	0.254653	NA	0.138	NA	4.885512
1163	10	90503075	90503075	T	C	exonic	LIPK	NA	synonymous SNV	LIPK:NM_001080518:exon8:c.T957C:p.H319H	exonic	ENSG00000204021	NA	synonymous SNV	ENSG00000204021:ENST00000404190:exon8:c.T957C:p.H319H	NA	NA	10q23.31	NA	NA	NA	NA	rs390152	0.24	0.24	0.229	0.257788	0.2207	0.3502	0.2911	0.1959	0.2607	0.21	0.35	0.23	0.17	0.3368	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.990683	NA	NA	0.223752	0.20563	ID=COSM1349666,COSM1349667;OCCURENCE=1(large_intestine)	0.152	NA	4.8854146
1163	9	111947761	111947761	G	T	intronic	EPB41L4B	NA	NA	NA	intronic	ENSG00000095203	NA	NA	NA	Score=664;Name=lod=664	NA	9q31.3	NA	NA	NA	NA	rs41278377	0.02	0.02	0.024	0.0167732	0.0437	NA	0.0375	0.0008	0.0133	0.04	NA	0.03	NA	0.0293	0.042	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.573846	1.573846	NA	0.041616	0.009212	NA	0.072	NA	4.885384
1164	19	56413532	56413532	G	A	exonic	NLRP13	NA	synonymous SNV	NLRP13:NM_176810:exon9:c.C2658T:p.H886H	exonic	ENSG00000173572	NA	synonymous SNV	ENSG00000173572:ENST00000342929:exon9:c.C2658T:p.H886H,ENSG00000173572:ENST00000588751:exon9:c.C2658T:p.H886H	NA	NA	19q13.43	NA	NA	NA	NA	rs7258847	0.16	0.16	0.138	0.148562	0.2803	0.0456	0.1787	0.0287	0.2597	0.29	0.05	0.2	0.05	0.2352	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.646528	NA	NA	0.266395	0.065592	NA	0.116	NA	4.8847716
1164	1	16890421	16890421	G	A	UTR3	NBPF1	NM_017940:c.*17C>T	NA	NA	UTR3	ENSG00000219481	ENST00000430580:c.*17C>T	NA	NA	NA	NA	1p36.13	NA	NA	Name=9	NA	rs2990549	NA	NA	0.196	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4486	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.417749	NA	NA	NA	NA	NA	NA	NA	4.8847334
1164	14	65735539	65735539	C	T	intergenic	MAX,MIR4708	dist=166277;dist=66297	NA	NA	ncRNA_intronic	ENSG00000258760	NA	NA	NA	NA	NA	14q23.3	NA	NA	Name=3	NA	rs1256516	0.26	0.26	0.279	0.26857	0.1153	0.2758	0.1167	0.5825	0.1022	0.11	0.28	0.14	0.55	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.29803	NA	NA	NA	NA	NA	0.246	NA	4.8847
1164	3	14187345	14187345	G	C	UTR3	XPC	NM_001145769:c.*96C>G,NM_004628:c.*96C>G	NA	NA	ncRNA_UTR3	ENSG00000154767	NA	NA	NA	NA	NA	3p25.1	NA	Name=CTCF	NA	NA	rs2229090	0.27	0.27	0.226	0.254992	0.2624	0.4544	0.2522	0.1241	0.2209	0.27	0.4	0.26	0.11	0.3533	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.246547	NA	NA	NA	NA	NA	0.239	NA	4.8843
1164	6	30314566	30314566	T	G	exonic	RPP21,TRIM39-RPP21	NA	synonymous SNV	RPP21:NM_001199120:exon5:c.T468G:p.T156T,RPP21:NM_024839:exon5:c.T444G:p.T148T,TRIM39-RPP21:NM_001199119:exon10:c.T1491G:p.T497T	exonic	ENSG00000241370,ENSG00000248167	NA	synonymous SNV	ENSG00000241370:ENST00000428040:exon4:c.T513G:p.T171T,ENSG00000241370:ENST00000433076:exon5:c.T468G:p.T156T,ENSG00000241370:ENST00000442966:exon5:c.T444G:p.T148T,ENSG00000248167:ENST00000513556:exon10:c.T1227G:p.T409T	NA	NA	6p22.1	NA	NA	NA	NA	rs1060065	0.31	0.31	0.292	0.372604	0.2435	0.505	0.4496	0.3018	0.41	0.21	0.44	0.36	0.29	0.2973	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.009966	NA	NA	0.241971	0.278293	NA	NA	NA	4.8838956
1164	2	101584951	101584951	A	G	intronic	NPAS2	NA	NA	NA	intronic	ENSG00000170485	NA	NA	NA	NA	NA	2q11.2	NA	Name=Pol2	NA	NA	rs35503589	0.27	0.27	0.222	0.301118	0.1163	0.4583	0.3487	0.292	0.3078	0.13	0.43	0.28	0.29	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.566039	NA	NA	NA	NA	NA	0.261	NA	4.8837
1164	11	73122340	73122340	A	G	intronic	FAM168A	NA	NA	NA	intronic	ENSG00000054965	NA	NA	NA	NA	NA	11q13.4	NA	NA	Name=3	NA	rs1938777	0.18	0.18	0.177	0.204473	0.1163	0.0387	0.0994	0.5416	0.0849	0.12	0.04	0.09	0.49	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.861813	NA	NA	NA	NA	NA	0.275	NA	4.8837
1164	5	178194326	178194326	C	T	ncRNA_exonic	AACSP1	NA	NA	NA	ncRNA_exonic	ENSG00000250420	NA	NA	NA	Score=599;Name=lod=362	NA	5q35.3	NA	NA	NA	NA	rs34080101	0.77	0.77	0.757	0.778355	0.7833	0.6667	0.755	0.8533	0.8037	0.79	0.65	0.75	0.88	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.502945	NA	NA	NA	NA	ID=COSM482604;OCCURENCE=1(kidney)	0.833	NA	4.8833666
1164	6	30229463	30229463	G	A	ncRNA_exonic	HLA-L	NA	NA	NA	ncRNA_exonic	ENSG00000243753	NA	NA	NA	Score=295;Name=lod=21	NA	6p22.1	NA	NA	NA	NA	rs2023477	0.33	0.33	0.275	0.368211	0.2435	0.4861	0.4481	0.3003	0.41	0.22	0.44	0.4	0.3	0.2958	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.666553	1.666553	NA	0.244371	0.278477	NA	0.384	NA	4.8829956
1164	19	4816241	4816241	G	A	UTR3	TICAM1	NM_182919:c.*10C>T	NA	NA	UTR3	ENSG00000127666	ENST00000248244:c.*10C>T	NA	NA	NA	NA	19p13.3	NA	Name=JunD	NA	NA	rs1046673	0.16	0.16	0.152	0.163938	0.1501	0.0675	0.1311	0.2935	0.1258	0.15	0.07	0.15	0.27	0.1449	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.693037	NA	NA	0.155465	0.285066	NA	0.174	NA	4.8828684
1164	15	84957252	84957252	G	A	intergenic	GOLGA6L4,DNM1P41	dist=43132;dist=88554	NA	NA	ncRNA_intronic	ENSG00000235370	NA	NA	NA	Score=494;Name=lod=136	NA	15q25.2	NA	NA	NA	NA	rs34432900	0.29	0.29	0.297	0.33766	0.1173	0.497	0.134	0.4221	0.4305	0.11	0.47	0.15	0.46	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.582041	NA	NA	NA	NA	NA	0.442	NA	4.8827
1164	3	66428282	66428282	C	T	UTR3	SLC25A26	NM_173471:c.*51C>T,NM_001164796:c.*51C>T	NA	NA	UTR3	ENSG00000144741	ENST00000354883:c.*51C>T,ENST00000336733:c.*51C>T,ENST00000536651:c.*707C>T,ENST00000464350:c.*405C>T,ENST00000483224:c.*496C>T,ENST00000413054:c.*191C>T	NA	NA	NA	NA	3p14.1	NA	NA	Name=2	NA	rs1046844	0.27	0.27	0.262	0.287939	0.2336	0.0546	0.3588	0.5552	0.1728	0.24	0.05	0.32	0.53	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.037091	NA	NA	0.21806	0.493595	NA	0.326	NA	4.8816734
1164	21	10862853	10862853	G	A	intergenic	TEKT4P2,TPTE	dist=894260;dist=43890	NA	NA	exonic	ENSG00000169861	NA	nonsynonymous SNV	ENSG00000169861:ENST00000302092:exon2:c.G149A:p.S50N,ENSG00000169861:ENST00000559480:exon2:c.G149A:p.S50N	Score=476;Name=lod=115	NA	21p11.2	NA	NA	NA	NA	rs1961808	NA	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4898	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.013975	NA	0.41	0.461876	0.244701	NA	0.435	NA	4.8816574
1164	3	4491046	4491046	A	G	intronic	SUMF1	NA	NA	NA	intronic	ENSG00000144455	NA	NA	NA	Score=295;Name=lod=21	NA	3p26.1	NA	NA	NA	NA	rs711634	0.02	0.02	0.016	0.0123802	0.0408	NA	0.0144	0.0023	0.0082	0.04	NA	0.02	0.0041	0.0315	0.046	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.823851	2.823851	NA	0.046395	0.01044	NA	0.094	NA	4.881305
1164	9	127913764	127913764	A	G	intronic	PPP6C	NA	NA	NA	ncRNA_exonic	ENSG00000232630	NA	NA	NA	Score=739;Name=lod=1347	NA	9q33.3	NA	NA	NA	NA	rs7019234	0.45	0.45	0.45	0.453674	0.4523	0.5397	0.3458	0.4637	0.4294	0.42	0.55	0.38	0.43	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.827698	NA	NA	NA	NA	NA	0.449	NA	4.8810333
1164	9	127913837	127913837	C	T	intronic	PPP6C	NA	NA	NA	ncRNA_exonic	ENSG00000232630	NA	NA	NA	Score=739;Name=lod=1347	NA	9q33.3	NA	NA	NA	NA	rs7019470	0.45	0.45	0.458	0.454673	0.4523	0.5397	0.3458	0.4675	0.4294	0.42	0.55	0.38	0.43	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.037774	NA	NA	NA	NA	NA	0.449	NA	4.8810333
1164	2	159719031	159719031	A	G	intergenic	DAPL1,TANC1	dist=46535;dist=106115	NA	NA	exonic	ENSG00000163331	NA	unknown	UNKNOWN	Score=321;Name=lod=27	NA	2q24.1	NA	NA	NA	NA	rs34995873	0.11	0.11	0.077	0.147764	0.1312	0.1974	0.0706	0.0113	0.3528	0.13	0.2	0.09	0.01	0.1546	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.967729	NA	NA	NA	NA	NA	0.094	NA	4.8808667
1164	3	195937410	195937410	G	T	intronic	ZDHHC19	NA	NA	NA	intronic	ENSG00000163958	NA	NA	NA	NA	NA	3q29	NA	Name=EBF1_(C-8)	NA	NA	rs6795707	0.17	0.17	0.139	0.166134	0.1193	0.3492	0.1931	0.0136	0.2127	0.11	0.38	0.18	0.01	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.315476	NA	NA	NA	NA	NA	0.058	NA	4.8807
1164	7	51450625	51450625	G	C	intergenic	COBL,POM121L12	dist=66110;dist=1652724	NA	NA	ncRNA_exonic	ENSG00000227233	NA	NA	NA	Score=671;Name=lod=710	NA	7p12.1	NA	NA	NA	NA	rs62447032	0.18	0.18	0.177	0.20028	0.1193	0.2758	0.1052	0.2277	0.2362	0.11	0.29	0.1	0.22	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.17549	NA	NA	NA	NA	NA	0.167	NA	4.8807
1164	19	35033414	35033414	A	C	intergenic	WTIP,SCGB1B2P	dist=41329;dist=34224	NA	NA	ncRNA_exonic	ENSG00000248830	NA	NA	NA	Score=289;Name=lod=20	NA	19q13.11	NA	NA	NA	NA	rs10406693	0.19	0.19	0.174	0.207867	0.1193	0.1002	0.0965	0.5348	0.047	0.11	0.05	0.09	0.53	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.540838	NA	NA	NA	NA	NA	0.174	NA	4.8807
1164	14	105213343	105213343	A	G	UTR3	ADSSL1	NM_152328:c.*3A>G,NM_199165:c.*3A>G	NA	NA	UTR3	ENSG00000185100	ENST00000330877:c.*3A>G,ENST00000332972:c.*3A>G,ENST00000553540:c.*808A>G,ENST00000556623:c.*3A>G,ENST00000555674:c.*3A>G	NA	NA	NA	NA	14q32.33	NA	Name=FOXA1_(SC-101058),FOXA1_(C-20)	Name=44	NA	rs6644	0.63	0.63	0.624	0.687101	0.4453	0.6438	0.6614	0.9486	0.6452	0.43	0.62	0.65	0.96	0.5493	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.124914	NA	NA	0.458256	0.876305	NA	0.645	NA	4.8804774
1164	3	4403837	4403837	A	G	exonic	SUMF1	NA	synonymous SNV	SUMF1:NM_001164674:exon8:c.T1041C:p.T347T,SUMF1:NM_001164675:exon8:c.T1056C:p.T352T,SUMF1:NM_182760:exon9:c.T1116C:p.T372T	exonic	ENSG00000144455	NA	synonymous SNV	ENSG00000144455:ENST00000458465:exon5:c.T720C:p.T240T,ENSG00000144455:ENST00000383843:exon8:c.T1041C:p.T347T,ENSG00000144455:ENST00000405420:exon8:c.T1056C:p.T352T,ENSG00000144455:ENST00000272902:exon9:c.T1116C:p.T372T	NA	NA	3p26.1	NA	NA	NA	NA	rs2633852	0.72	0.72	0.712	0.760383	0.5905	0.7609	0.6945	0.9206	0.7648	0.59	0.75	0.69	0.9	0.644	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.428604	NA	NA	0.551977	0.85202	NA	0.659	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000082714.1;CLNDSDB=.;CLNDSDBID=.	4.8801896
1164	11	18267135	18267135	C	T	intronic	SAA2,SAA2-SAA4	NA	NA	NA	ncRNA_intronic	ENSG00000255071	NA	NA	NA	NA	NA	11p15.1	NA	NA	Name=6	NA	rs56373142	0.26	0.26	0.227	0.252196	0.4533	0.0536	0.2968	0.1921	0.2996	0.44	0.04	0.3	0.18	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.111351	NA	NA	NA	NA	NA	0.406	NA	4.8800333
1164	17	42475983	42475983	G	C	exonic	GPATCH8	NA	synonymous SNV	GPATCH8:NM_001002909:exon8:c.C3462G:p.T1154T	exonic	ENSG00000186566	NA	synonymous SNV	ENSG00000186566:ENST00000591680:exon8:c.C3462G:p.T1154T,ENSG00000186566:ENST00000434000:exon9:c.C3228G:p.T1076T	Score=497;Name=lod=139	NA	17q21.31	NA	NA	NA	NA	rs936019	0.53	0.53	0.525	0.491613	0.6014	0.497	0.5937	0.4009	0.4233	0.59	0.52	0.63	0.4	0.563	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.547108	NA	NA	0.622558	0.412352	ID=COSM1178442;OCCURENCE=1(prostate)	0.384	NA	4.8797086
1164	2	38044662	38044662	G	A	intergenic	CDC42EP3,RMDN2	dist=144984;dist=107800	NA	NA	ncRNA_exonic	ENSG00000225402	NA	NA	NA	Score=620;Name=lod=440	NA	2p22.2	NA	NA	NA	NA	rs62135788	0.09	0.09	0.077	0.0960463	0.1203	0.0308	0.072	0.1014	0.1483	0.13	0.03	0.09	0.08	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.607359	NA	NA	NA	NA	NA	0.094	NA	4.8797
1164	11	48485877	48485877	T	C	intergenic	OR4C45,OR4A47	dist=111878;dist=24468	NA	NA	ncRNA_exonic	ENSG00000254925	NA	NA	NA	Score=243;Name=lod=13	NA	11p11.2	NA	NA	NA	NA	rs9667626	0.17	0.17	0.171	0.186302	0.1203	0.1667	0.1297	0.3359	0.1125	0.12	0.16	0.13	0.31	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.55235	NA	NA	NA	NA	NA	0.181	NA	4.8797
1164	11	90016813	90016813	G	T	intergenic	CHORDC1,MIR4490	dist=60281;dist=272129	NA	NA	ncRNA_exonic	ENSG00000214391	NA	NA	NA	Score=892;Name=lod=5600	NA	11q14.3	NA	NA	NA	NA	rs11606517	0.13	0.13	0.098	0.109625	0.1203	0.1696	0.2089	0.0045	0.1084	0.12	0.2	0.19	0.01	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.452184	NA	0.07	NA	NA	NA	0.065	NA	4.8797
1164	12	39860886	39860886	C	A	intergenic	KIF21A,ABCD2	dist=23694;dist=84136	NA	NA	ncRNA_exonic	ENSG00000255991	NA	NA	NA	Score=760;Name=lod=1639	NA	12q12	NA	NA	NA	NA	rs7302302	0.12	0.12	0.117	0.124401	0.1203	0.1429	0.0677	0.1437	0.1237	0.11	0.13	0.08	0.15	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.225803	NA	NA	NA	NA	NA	0.08	NA	4.8797
1164	19	35035873	35035873	G	C	intergenic	WTIP,SCGB1B2P	dist=43788;dist=31765	NA	NA	ncRNA_exonic	ENSG00000248830	NA	NA	NA	Score=251;Name=lod=14	NA	19q13.11	NA	NA	NA	NA	rs6510426	0.23	0.23	0.243	0.253195	0.1203	0.1002	0.1124	0.6974	0.047	0.11	0.05	0.11	0.7	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.133017	NA	NA	NA	NA	NA	0.326	NA	4.8797
1164	8	139697478	139697478	T	C	exonic	COL22A1	NA	synonymous SNV	COL22A1:NM_152888:exon38:c.A2940G:p.P980P	exonic	ENSG00000169436	NA	synonymous SNV	ENSG00000169436:ENST00000303045:exon38:c.A2940G:p.P980P,ENSG00000169436:ENST00000435777:exon38:c.A2940G:p.P980P	NA	NA	8q24.23	Score=715;Name=V$HOX13_01	NA	NA	NA	rs9644500	0.59	0.59	0.543	0.578674	0.5974	0.7887	0.6412	0.379	0.5685	0.6	0.77	0.6	0.35	0.5888	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.663311	NA	NA	0.60093	0.431457	NA	0.493	NA	4.8795366
1164	3	98540982	98540982	A	G	intronic	DCBLD2	NA	NA	NA	intronic	ENSG00000057019	NA	NA	NA	NA	NA	3q12.1	NA	NA	NA	NA	rs852701	0.41	0.41	0.361	0.385783	0.3757	0.6796	0.5115	0.0772	0.4213	0.36	0.69	0.51	0.1	0.3907	0.69	0.5	T	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.939	T	0.000	T	.	-0.175	3.147	-3.59	-0.742	-0.401	1.020	-0.175133	NA	NA	0.354093	0.125571	NA	0.254	NA	4.879507
1164	5	141335241	141335241	A	G	exonic	PCDH12	NA	synonymous SNV	PCDH12:NM_016580:exon1:c.T2176C:p.L726L	exonic	ENSG00000113555	NA	synonymous SNV	ENSG00000113555:ENST00000231484:exon1:c.T2176C:p.L726L	Score=325;Name=lod=28	NA	5q31.3	NA	NA	NA	NA	rs164073	0.75	0.75	0.762	0.780152	0.5765	0.8581	0.719	0.941	0.7352	0.56	0.86	0.69	0.93	0.6519	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.754382	NA	NA	0.55907	0.867907	NA	0.754	NA	4.8791966
1164	15	34634138	34634138	G	A	UTR3	NOP10	NM_018648:c.*31C>T	NA	NA	UTR3	ENSG00000182117	ENST00000328848:c.*31C>T,ENST00000557912:c.*57C>T	NA	NA	NA	NA	15q14	NA	Name=BRF2	NA	NA	rs1045204	0.17	0.17	0.179	0.205471	0.1561	0.3353	0.1945	0.1339	0.227	0.13	0.29	0.15	0.1	0.1667	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.526054	NA	NA	0.13134	0.137892	ID=COSN164888;OCCURENCE=1(NS)	NA	NA	4.8791934
1164	5	126792974	126792974	T	A	exonic	MEGF10	NA	synonymous SNV	MEGF10:NM_001256545:exon25:c.T3387A:p.G1129G,MEGF10:NM_032446:exon26:c.T3387A:p.G1129G	exonic	ENSG00000145794	NA	synonymous SNV	ENSG00000145794:ENST00000503335:exon25:c.T3387A:p.G1129G,ENSG00000145794:ENST00000274473:exon26:c.T3387A:p.G1129G	Score=422;Name=lod=69	NA	5q23.2	NA	NA	NA	NA	rs3812052	0.42	0.42	0.408	0.377995	0.6372	0.3026	0.4712	0.1604	0.4172	0.63	0.32	0.49	0.18	0.5275	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.097939	NA	NA	0.622907	0.240581	NA	0.29	NA	4.8790596
1164	2	42697197	42697197	G	A	intronic	KCNG3	NA	NA	NA	ncRNA_exonic	ENSG00000236913	NA	NA	NA	Score=638;Name=lod=524	NA	2p21	NA	NA	NA	NA	rs34213343	0.4	0.4	0.37	0.404553	0.4543	0.2391	0.598	0.2965	0.5327	0.43	0.25	0.61	0.35	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.572225	NA	NA	NA	NA	NA	0.406	NA	4.8790333
1164	19	613491	613491	G	A	intronic	HCN2	NA	NA	NA	intronic	ENSG00000099822	NA	NA	NA	Score=493;Name=lod=134	NA	19p13.3	NA	NA	NA	NA	rs55812706	0.02	0.02	0.024	0.0191693	0.0437	NA	0.0173	0.003	0.0368	0.05	NA	0.02	0.01	0.034	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.42634	NA	NA	0.043372	0.00545	NA	0.014	NA	4.878928
1164	14	95192635	95192635	C	A	intergenic	SERPINA13P,GSC	dist=79304;dist=41925	NA	NA	ncRNA_exonic	ENSG00000239269	NA	NA	NA	Score=800;Name=lod=2376	NA	14q32.13	NA	NA	NA	NA	rs61745669	0.08	0.08	0.086	0.0978435	0.1213	0.0536	0.0605	0.0643	0.1912	0.11	0.06	0.07	0.08	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.029079	NA	NA	NA	NA	NA	0.109	NA	4.8787
1164	14	95193377	95193377	T	G	intergenic	SERPINA13P,GSC	dist=80046;dist=41183	NA	NA	ncRNA_exonic	ENSG00000239269	NA	NA	NA	Score=800;Name=lod=2376	NA	14q32.13	NA	NA	NA	NA	rs3814818	0.08	0.08	0.073	0.0978435	0.1213	0.0536	0.0605	0.0643	0.1912	0.11	0.06	0.07	0.08	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.686012	NA	NA	NA	NA	NA	0.109	NA	4.8787
1164	3	148925418	148925418	G	A	intronic	CP	NA	NA	NA	intronic	ENSG00000047457	NA	NA	NA	NA	NA	3q25.1	NA	NA	Name=7	NA	rs34067682	0.05	0.05	0.036	0.0451278	0.0378	0.0417	0.0346	0.0719	0.0276	0.03	0.05	0.05	0.08	0.04	0.087	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.877147	1.877147	NA	0.043615	0.070586	NA	0.058	NA	4.878585
1164	20	10032413	10032413	T	G	exonic	ANKEF1	NA	synonymous SNV	ANKEF1:NM_198798:exon7:c.T1746G:p.A582A,ANKEF1:NM_022096:exon8:c.T1746G:p.A582A	exonic	ENSG00000132623	NA	synonymous SNV	ENSG00000132623:ENST00000378380:exon7:c.T1746G:p.A582A,ENSG00000132623:ENST00000378392:exon8:c.T1746G:p.A582A	NA	NA	20p12.2	NA	NA	NA	NA	rs683145	0.18	0.18	0.188	0.200679	0.2744	0.0069	0.1585	0.2791	0.2485	0.27	0.01	0.18	0.25	0.2335	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.137539	NA	NA	0.280814	0.27054	NA	0.196	NA	4.8779526
1164	5	66904546	66904546	G	A	intergenic	CD180,PIK3R1	dist=411929;dist=607038	NA	NA	ncRNA_exonic	ENSG00000239870	NA	NA	NA	Score=719;Name=lod=1117	NA	5q13.1	NA	NA	NA	NA	rs72766860	0.06	0.06	0.051	0.057508	0.1223	NA	0.0677	0.0106	0.1063	0.13	NA	0.05	0.01	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.570281	NA	NA	NA	NA	NA	0.087	NA	4.8777
1164	12	52709222	52709222	T	C	intronic	KRT83	NA	NA	NA	intronic	ENSG00000170523,ENSG00000267873	NA	NA	NA	NA	NA	12q13.13	NA	Name=c-Jun,JunD	NA	NA	rs3741720	0.2	0.2	0.185	0.176917	0.1223	0.4325	0.1873	0.0265	0.1656	0.13	0.42	0.23	0.03	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.091807	NA	NA	NA	NA	NA	0.051	NA	4.8777
1164	15	40604777	40604777	A	T	intergenic	PLCB2,C15orf52	dist=4603;dist=18876	NA	NA	ncRNA_exonic	ENSG00000244705	NA	NA	NA	Score=796;Name=lod=2290	NA	15q15.1	NA	NA	NA	NA	rs2412509	0.15	0.15	0.134	0.179113	0.1223	0.2143	0.1671	0.1392	0.2638	0.12	0.2	0.16	0.14	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.275007	NA	NA	NA	NA	NA	0.152	NA	4.8777
1164	19	57828735	57828735	G	T	intergenic	ZNF460,ZNF543	dist=23299;dist=3130	NA	NA	ncRNA_exonic	ENSG00000268723	NA	NA	NA	Score=688;Name=lod=832	NA	19q13.43	NA	NA	NA	NA	rs1559	0.23	0.23	0.205	0.244808	0.1223	0.3482	0.2061	0.3026	0.2137	0.12	0.35	0.18	0.31	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.510558	3.510558	NA	NA	NA	NA	0.167	NA	4.8777
1164	9	34224285	34224285	C	T	intronic	UBAP1	NA	NA	NA	ncRNA_exonic	ENSG00000233668	NA	NA	NA	Score=739;Name=lod=1340	NA	9p13.3	NA	NA	NA	NA	rs17258212	0.25	0.25	0.208	0.226238	0.4563	0.0615	0.3372	0.0598	0.3057	0.46	0.07	0.38	0.05	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.692195	NA	NA	NA	NA	NA	0.355	NA	4.8770333
1164	20	46365571	46365571	A	G	exonic	SULF2	NA	synonymous SNV	SULF2:NM_001161841:exon3:c.T291C:p.T97T,SULF2:NM_018837:exon3:c.T291C:p.T97T,SULF2:NM_198596:exon3:c.T291C:p.T97T	exonic	ENSG00000196562	NA	synonymous SNV	ENSG00000196562:ENST00000359930:exon3:c.T291C:p.T97T,ENSG00000196562:ENST00000361612:exon3:c.T291C:p.T97T,ENSG00000196562:ENST00000437955:exon3:c.T291C:p.T97T,ENSG00000196562:ENST00000467815:exon3:c.T291C:p.T97T,ENSG00000196562:ENST00000484875:exon3:c.T291C:p.T97T	Score=695;Name=lod=887	NA	20q13.12	NA	NA	NA	NA	rs3810526	0.66	0.66	0.68	0.655751	0.5636	0.625	0.5764	0.8336	0.5982	0.55	0.7	0.58	0.83	0.6142	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.477354	1.477354	NA	0.612093	0.779392	NA	0.63	NA	4.8767736
1164	15	81666431	81666431	A	G	upstream	TMC3	NA	NA	NA	UTR5	ENSG00000188869	ENST00000359440:c.-13T>C,ENST00000558726:c.-13T>C	NA	NA	NA	NA	15q25.1	NA	NA	Name=27	NA	rs77997646	0.06	0.06	0.063	0.0626997	0.0278	0.0754	0.0231	0.1067	0.0542	0.03	0.09	0.03	0.11	0.0543	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.514944	NA	NA	0.041137	0.080153	NA	0.051	NA	4.876763
1164	9	117609723	117609723	T	A	intergenic	TNFSF15,TNFSF8	dist=41315;dist=45900	NA	NA	ncRNA_exonic	ENSG00000229817	NA	NA	NA	Score=652;Name=lod=596	NA	9q32	NA	NA	NA	NA	rs10491581	0.13	0.13	0.121	0.159744	0.1233	0.1835	0.1628	0.1014	0.2495	0.12	0.15	0.14	0.11	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.541796	1.541796	NA	NA	NA	NA	0.123	NA	4.8767
1164	11	124401725	124401725	T	G	intergenic	OR8B8,OR8B12	dist=90744;dist=10893	NA	NA	ncRNA_exonic	ENSG00000255315	NA	NA	NA	Score=309;Name=lod=24	NA	11q24.2	NA	NA	NA	NA	rs11219687	0.17	0.17	0.155	0.173722	0.1233	0.1538	0.2305	0.2179	0.1462	0.13	0.14	0.21	0.24	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.023772	NA	NA	NA	NA	NA	0.268	NA	4.8767
1164	14	39684269	39684269	G	A	intergenic	PNN,MIA2	dist=31847;dist=18856	NA	NA	ncRNA_exonic	ENSG00000270503	NA	NA	NA	Score=718;Name=lod=1108	NA	14q21.1	NA	NA	NA	NA	rs74048717	0.23	0.23	0.214	0.198083	0.1233	0.4435	0.1268	0.1619	0.1217	0.12	0.47	0.14	0.17	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.254728	1.254728	NA	NA	NA	NA	0.094	NA	4.8767
1164	19	20003576	20003576	C	G	UTR3	ZNF253	NM_021047:c.*20C>G	NA	NA	ncRNA_UTR3	ENSG00000256771	NA	NA	NA	Score=374;Name=lod=44	NA	19p12	NA	NA	NA	NA	rs12460570	0.32	0.32	0.266	0.298323	0.1839	0.6181	0.3098	0.1899	0.2249	0.2	0.62	0.25	0.2	0.2447	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.826888	NA	NA	0.194712	0.184689	NA	0.283	NA	4.876688
1164	19	58420167	58420167	T	C	exonic	ZNF417	NA	synonymous SNV	ZNF417:NM_152475:exon3:c.A1479G:p.E493E	exonic	ENSG00000173480	NA	synonymous SNV	ENSG00000173480:ENST00000312026:exon3:c.A1479G:p.E493E,ENSG00000173480:ENST00000595559:exon3:c.A1476G:p.E492E,ENSG00000173480:ENST00000536263:exon4:c.A882G:p.E294E	NA	NA	19q13.43	NA	NA	NA	NA	rs17852300	0.21	0.21	0.15	0.246206	0.2972	0.2847	0.219	0.1543	0.2975	0.26	0.23	0.22	0.1	0.2584	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.275429	NA	NA	0.234938	0.119156	ID=COSM148789;OCCURENCE=1(stomach)	0.246	NA	4.8761286
1164	1	43352995	43352995	A	T	intergenic	ZNF691,SLC2A1	dist=34849;dist=38051	NA	NA	ncRNA_intronic	ENSG00000233708	NA	NA	NA	Score=588;Name=lod=328	NA	1p34.2	NA	NA	NA	NA	rs72669421	0.17	0.17	0.145	0.166534	0.1243	0.2192	0.2723	0.1127	0.1534	0.13	0.25	0.22	0.12	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.119286	NA	NA	NA	NA	NA	0.109	NA	4.8757
1164	1	203797335	203797335	A	G	intronic	ZC3H11A	NA	NA	NA	intronic	ENSG00000058673	NA	NA	NA	NA	NA	1q32.1	NA	NA	Name=22	NA	rs35073773	0.06	0.06	0.054	0.0547125	0.1243	0.002	0.0476	0.0265	0.0808	0.12	0.0035	0.07	0.02	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.938144	NA	NA	NA	NA	NA	0.029	NA	4.8757
1164	1	220488354	220488354	T	A	intergenic	RAB3GAP2,MARK1	dist=42511;dist=213214	NA	NA	ncRNA_exonic	ENSG00000230318	NA	NA	NA	Score=678;Name=lod=758	NA	1q41	NA	NA	NA	NA	rs6694670	0.22	0.22	0.254	0.227436	0.1243	0.2758	0.1729	0.3457	0.1626	0.12	0.3	0.13	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.251528	NA	NA	NA	NA	NA	0.261	NA	4.8757
1164	1	220490435	220490435	T	C	intergenic	RAB3GAP2,MARK1	dist=44592;dist=211133	NA	NA	ncRNA_exonic	ENSG00000232883	NA	NA	NA	Score=796;Name=lod=2285	NA	1q41	NA	NA	NA	NA	rs7553951	0.22	0.22	0.222	0.227436	0.1243	0.2758	0.1729	0.3457	0.1626	0.12	0.3	0.13	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.118444	NA	NA	NA	NA	NA	0.232	NA	4.8757
1164	1	220490497	220490497	C	T	intergenic	RAB3GAP2,MARK1	dist=44654;dist=211071	NA	NA	ncRNA_exonic	ENSG00000232883	NA	NA	NA	Score=796;Name=lod=2285	NA	1q41	NA	NA	NA	NA	rs7540014	0.22	0.22	0.226	0.227436	0.1243	0.2758	0.1729	0.3457	0.1626	0.12	0.3	0.13	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.043335	NA	NA	NA	NA	NA	0.261	NA	4.8757
1164	1	220490743	220490743	T	C	intergenic	RAB3GAP2,MARK1	dist=44900;dist=210825	NA	NA	ncRNA_exonic	ENSG00000232883	NA	NA	NA	Score=796;Name=lod=2285	NA	1q41	NA	NA	NA	NA	rs59417140	0.22	0.22	0.218	0.228834	0.1243	0.2768	0.1758	0.3487	0.1626	0.12	0.3	0.13	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.234775	NA	NA	NA	NA	NA	0.268	NA	4.8757
1164	3	9854865	9854865	A	C	intronic	ARPC4-TTLL3,TTLL3	NA	NA	NA	intronic	ENSG00000214021,ENSG00000241553,ENSG00000250151	NA	NA	NA	NA	NA	3p25.3	NA	Name=Pol2-4H8,BCL3	NA	NA	rs11708462	0.14	0.14	0.131	0.134185	0.1243	0.0486	0.1124	0.2572	0.0818	0.13	0.06	0.13	0.27	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.546189	NA	NA	NA	NA	NA	0.152	NA	4.8757
1164	4	2178149	2178149	G	A	intronic	POLN	NA	NA	NA	intronic	ENSG00000130997	NA	NA	NA	NA	NA	4p16.3	NA	NA	Name=3	NA	rs6599413	0.31	0.31	0.311	0.321885	0.1243	0.373	0.2435	0.5703	0.1922	0.13	0.37	0.25	0.57	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.04388	NA	NA	NA	NA	NA	0.362	NA	4.8757
1164	9	88692255	88692255	C	T	intronic	GOLM1	NA	NA	NA	intronic	ENSG00000135052	NA	NA	NA	NA	NA	9q21.33	NA	NA	Name=9	NA	rs17051613	0.08	0.08	0.072	0.0878594	0.1243	0.0486	0.0562	0.0658	0.1431	0.12	0.04	0.07	0.08	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.03955	NA	NA	NA	NA	NA	0.094	NA	4.8757
1164	9	117609919	117609919	A	C	intergenic	TNFSF15,TNFSF8	dist=41511;dist=45704	NA	NA	ncRNA_exonic	ENSG00000229817	NA	NA	NA	Score=735;Name=lod=1289	NA	9q32	NA	NA	NA	NA	rs16931895	0.13	0.13	0.106	0.160942	0.1243	0.1835	0.1643	0.1044	0.2495	0.12	0.15	0.14	0.11	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.686716	NA	NA	NA	NA	NA	0.123	NA	4.8757
1164	13	20221516	20221516	A	G	intronic	MPHOSPH8	NA	NA	NA	intronic	ENSG00000196199	NA	NA	NA	NA	NA	13q12.11	NA	NA	Name=2	NA	rs35424555	0.12	0.12	0.108	0.128994	0.1243	0.0417	0.1455	0.2413	0.0603	0.1	0.02	0.19	0.24	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.069407	NA	NA	NA	NA	NA	0.109	NA	4.8757
1164	14	65735684	65735684	T	C	intergenic	MAX,MIR4708	dist=166422;dist=66152	NA	NA	ncRNA_exonic	ENSG00000214759	NA	NA	NA	Score=597;Name=lod=357	NA	14q23.3	NA	NA	NA	NA	rs1256517	0.26	0.26	0.272	0.273163	0.1243	0.2758	0.1297	0.5825	0.1074	0.12	0.28	0.15	0.55	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.441851	NA	NA	NA	NA	NA	0.254	NA	4.8757
1164	11	5322520	5322520	G	A	exonic	OR51B4	NA	synonymous SNV	OR51B4:NM_033179:exon1:c.C657T:p.L219L	exonic	ENSG00000183251	NA	synonymous SNV	ENSG00000183251:ENST00000380224:exon1:c.C657T:p.L219L	NA	NA	11p15.4	NA	NA	NA	NA	rs12283334	0.19	0.19	0.165	0.196885	0.2565	0.1458	0.2651	0.1354	0.2229	0.26	0.12	0.29	0.09	0.2549	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.610527	NA	NA	0.280195	0.143344	NA	0.275	NA	4.8750716
1165	13	29173197	29173197	C	T	intergenic	FLT1,POMP	dist=103932;dist=59944	NA	NA	ncRNA_exonic	ENSG00000235472	NA	NA	NA	Score=798;Name=lod=2344	NA	13q12.3	NA	NA	NA	NA	rs11617595	0.17	0.17	0.159	0.205072	0.1252	0.1815	0.2147	0.233	0.2669	0.11	0.18	0.21	0.21	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.813194	NA	NA	NA	NA	NA	0.239	NA	4.8748
1165	17	59543090	59543090	T	C	intronic	TBX4	NA	NA	NA	intronic	ENSG00000121075	NA	NA	NA	NA	NA	17q23.2	NA	NA	Name=2	NA	rs35279830	0.18	0.18	0.161	0.17492	0.1252	0.2331	0.1484	0.1967	0.1554	0.14	0.22	0.14	0.22	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.427169	NA	NA	NA	NA	NA	0.152	NA	4.8748
1165	20	60734914	60734914	C	G	intronic	SS18L1	NA	NA	NA	intronic	ENSG00000184402	NA	NA	NA	NA	NA	20q13.33	NA	Name=GR	NA	NA	rs56404343	0.02	0.02	0.011	0.0185703	0.0477	NA	0.0331	0.0053	0.0153	0.04	NA	0.02	0.0041	0.0334	0.045	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.536615	NA	NA	0.044894	0.008868	NA	0.014	NA	4.874006
1165	8	59512334	59512334	G	A	exonic	NSMAF	NA	synonymous SNV	NSMAF:NM_001144772:exon18:c.C1521T:p.D507D,NSMAF:NM_003580:exon18:c.C1428T:p.D476D	exonic	ENSG00000035681	NA	synonymous SNV	ENSG00000035681:ENST00000038176:exon18:c.C1428T:p.D476D,ENSG00000035681:ENST00000427130:exon18:c.C1521T:p.D507D	Score=508;Name=lod=155	NA	8q12.1	Score=930;Name=V$ATF6_01	NA	NA	NA	rs2680903	0.94	0.94	0.947	0.929313	0.9294	0.9792	0.9352	0.8585	0.9693	0.93	0.98	0.94	0.9	0.9309	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.185913	NA	NA	0.932442	0.879256	NA	0.855	NA	4.8739246
1165	6	29912398	29912398	A	G	intronic	HLA-A	NA	NA	NA	exonic	ENSG00000206503	NA	synonymous SNV	ENSG00000206503:ENST00000376806:exon5:c.A1017G:p.G339G	NA	NA	6p22.1	NA	Name=Pol2,Pol2-4H8	NA	NA	rs9260191	0.51	0.51	0.466	NA	NA	NA	NA	NA	NA	0.48	0.47	0.52	0.6	0.5025	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.135417	NA	NA	0.456916	0.513926	NA	0.319	NA	4.8739173
1165	5	2788209	2788209	G	A	intergenic	C5orf38,LOC285577	dist=32698;dist=629057	NA	NA	ncRNA_exonic	ENSG00000249541	NA	NA	NA	Score=510;Name=lod=158	NA	5p15.33	NA	NA	NA	NA	rs6897101	0.1	0.1	0.102	0.10623	0.1262	0.1071	0.0576	0.1104	0.1135	0.13	0.07	0.04	0.13	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.524223	NA	NA	NA	NA	NA	0.029	NA	4.8738
1165	15	79851655	79851655	A	G	intergenic	KIAA1024,MTHFS	dist=87013;dist=284234	NA	NA	ncRNA_exonic	ENSG00000259493	NA	NA	NA	Score=579;Name=lod=300	NA	15q25.1	NA	NA	NA	NA	rs60938192	0.14	0.14	0.146	0.147963	0.1262	0.1548	0.2133	0.0983	0.184	0.12	0.17	0.15	0.13	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.055739	NA	NA	NA	NA	NA	0.101	NA	4.8738
1165	20	18143355	18143355	C	T	exonic	CSRP2BP	NA	synonymous SNV	CSRP2BP:NM_020536:exon6:c.C1437T:p.P479P	exonic	ENSG00000149474	NA	synonymous SNV	ENSG00000149474:ENST00000489634:exon5:c.C1053T:p.P351P,ENSG00000149474:ENST00000435364:exon6:c.C1437T:p.P479P,ENSG00000149474:ENST00000278816:exon7:c.C1437T:p.P479P,ENSG00000149474:ENST00000377681:exon7:c.C1434T:p.P478P	NA	NA	20p11.23	NA	NA	NA	NA	rs1205194	0.29	0.29	0.284	0.28774	0.2575	0.498	0.2651	0.0688	0.4141	0.27	0.53	0.24	0.09	0.2879	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.694306	NA	NA	0.247791	0.100772	NA	0.254	NA	4.8734756
1165	3	197239266	197239266	C	G	intronic	BDH1	NA	NA	NA	intronic	ENSG00000161267	NA	NA	NA	NA	NA	3q29	NA	Name=E2F6_(H-50),CTCF_(SC-5916),Rad21,CTCF	Name=10	NA	rs9325394	0.26	0.26	0.241	0.236422	0.4125	0.0536	0.2291	0.2867	0.181	0.41	0.06	0.25	0.27	0.3297	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.094109	NA	NA	0.384471	0.306341	NA	0.297	NA	4.873329
1165	9	127620141	127620141	A	G	UTR3	WDR38	NM_001276375:c.*232A>G,NM_001276374:c.*232A>G,NM_001045476:c.*232A>G,NM_001276376:c.*232A>G	NA	NA	UTR3	ENSG00000136918	ENST00000373574:c.*232A>G	NA	NA	NA	NA	9q33.3	NA	NA	Name=2	NA	rs876663	0.32	0.32	0.297	0.289537	0.4602	0.3542	0.317	0.0734	0.32	0.44	0.36	0.33	0.07	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.466334	NA	NA	NA	NA	NA	0.304	NA	4.8731334
1165	8	136638171	136638171	A	T	intronic	KHDRBS3	NA	NA	NA	ncRNA_exonic	ENSG00000253915	NA	NA	NA	Score=621;Name=lod=447	NA	8q24.23	NA	NA	NA	NA	rs10089538	0.38	0.38	0.331	0.389976	0.4602	0.4504	0.4611	0.1369	0.547	0.46	0.43	0.48	0.13	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.354365	NA	NA	NA	NA	NA	0.239	NA	4.8731333
1165	16	68720344	68720344	C	T	intronic	CDH3	NA	NA	NA	ncRNA_exonic	ENSG00000261395	NA	NA	NA	Score=607;Name=lod=390	NA	16q22.1	NA	NA	NA	NA	rs4783664	0.43	0.43	0.398	0.404752	0.4602	0.5516	0.4452	0.174	0.4796	0.47	0.58	0.45	0.17	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.968572	NA	NA	NA	NA	NA	0.486	NA	4.8731333
1165	2	3624303	3624303	G	A	intronic	RPS7	NA	NA	NA	intronic	ENSG00000171863	NA	NA	NA	NA	NA	2p25.3	NA	NA	Name=5	NA	rs80103345	0.04	0.04	0.04	0.0571086	0.0636	0.0575	0.036	0.0113	0.1268	0.06	0.04	0.04	0.01	0.0633	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.319206	NA	NA	NA	NA	NA	0.058	NA	4.8731
1165	2	75113789	75113789	C	G	exonic	HK2	NA	synonymous SNV	HK2:NM_000189:exon15:c.C2208G:p.P736P	exonic	ENSG00000159399	NA	synonymous SNV	ENSG00000159399:ENST00000290573:exon15:c.C2208G:p.P736P,ENSG00000159399:ENST00000409174:exon15:c.C2124G:p.P708P	NA	NA	2p12	Score=769;Name=V$AHRARNT_02	NA	NA	NA	rs2229627	0.53	0.53	0.523	0.517572	0.6203	0.4554	0.4928	0.4175	0.6288	0.62	0.47	0.54	0.47	0.5721	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.939144	NA	NA	0.601395	0.447345	NA	0.507	NA	4.8728716
1165	4	110476870	110476870	G	C	intergenic	SEC24B,CCDC109B	dist=15255;dist=4485	NA	NA	ncRNA_exonic	ENSG00000249965	NA	NA	NA	Score=739;Name=lod=1338	NA	4q25	NA	NA	NA	NA	rs6818911	0.27	0.27	0.31	0.309105	0.1272	0.126	0.1196	0.8033	0.1513	0.13	0.09	0.12	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.005445	NA	NA	NA	NA	NA	0.42	NA	4.8728
1165	6	31246266	31246266	C	T	intergenic	HLA-C,HLA-B	dist=6353;dist=75383	NA	NA	ncRNA_exonic	ENSG00000214892	NA	NA	NA	Score=621;Name=lod=445	NA	6p21.33	NA	NA	NA	NA	rs11967243	0.16	0.16	0.137	0.13139	0.1272	0.253	0.1282	0.0832	0.0777	0.14	0.27	0.12	0.08	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.452188	1.452188	NA	NA	NA	NA	0.138	NA	4.8728
1165	7	128479982	128479982	C	G	intronic	FLNC	NA	NA	NA	intronic	ENSG00000128591	NA	NA	NA	NA	NA	7q32.1	Score=851;Name=V$NGFIC_01	NA	NA	NA	rs61448157	0.17	0.17	0.171	0.202476	0.1272	0.1786	0.1527	0.2799	0.2352	0.12	0.16	0.12	0.27	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.355508	1.355508	NA	NA	NA	NA	0.254	NA	4.8728
1165	13	48337637	48337637	G	C	intergenic	HTR2A,SUCLA2	dist=866426;dist=179154	NA	NA	ncRNA_exonic	ENSG00000234145	NA	NA	NA	Score=693;Name=lod=872	NA	13q14.2	NA	NA	NA	NA	rs1924802	0.1	0.1	0.102	0.126398	0.1272	0.131	0.0836	0.0847	0.2076	0.12	0.11	0.09	0.07	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.67845	NA	NA	NA	NA	ID=COSN164490;OCCURENCE=1(breast)	0.101	NA	4.8728
1165	6	11714806	11714806	G	A	intronic	ADTRP	NA	NA	NA	intronic	ENSG00000111863	NA	NA	NA	NA	NA	6p24.1	NA	Name=MEF2A,ZNF263,Pol2-4H8,YY1_(C-20),EBF,EBF1_(C-8),NFKB	Name=15	NA	rs3734273	0.41	0.41	0.366	0.381989	0.5577	0.2718	0.572	0.1906	0.4387	0.55	0.29	0.56	0.22	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.463848	NA	NA	0.569767	0.266618	NA	0.348	NA	4.872533
1165	7	149508703	149508703	G	C	intronic	SSPO	NA	NA	NA	ncRNA_intronic	ENSG00000197558	NA	NA	NA	NA	NA	7q36.1	NA	Name=eGFP-GATA2	NA	NA	rs55649542	0.21	0.21	0.192	0.20647	0.1441	0.2401	0.1614	0.3147	0.1217	0.13	0.22	0.16	0.33	0.1658	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.239973	NA	NA	0.151068	0.287463	ID=COSN168221;OCCURENCE=1(large_intestine)	0.225	NA	4.8723653
1165	6	154538359	154538359	A	G	intronic	IPCEF1,OPRM1	NA	NA	NA	ncRNA_exonic	ENSG00000237593	NA	NA	NA	Score=752;Name=lod=1522	NA	6q25.2	NA	NA	NA	NA	rs790259	0.48	0.48	0.495	0.525958	0.4612	0.3214	0.6297	0.6793	0.5225	0.44	0.32	0.59	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.318122	NA	NA	NA	NA	NA	0.493	NA	4.8721333
1165	2	232450762	232450762	G	A	intergenic	NMUR1,C2orf57	dist=55580;dist=6813	NA	NA	ncRNA_exonic	ENSG00000228884	NA	NA	NA	Score=737;Name=lod=1313	NA	2q37.1	NA	NA	NA	NA	rs13008814	0.06	0.06	0.048	0.0509185	0.1282	0.001	0.0576	0.0038	0.0818	0.14	0.0017	0.07	0.01	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.207859	NA	NA	NA	NA	NA	0.058	NA	4.8718
1165	8	13562995	13562995	G	C	intergenic	C8orf48,SGCZ	dist=137198;dist=384378	NA	NA	ncRNA_exonic	ENSG00000255457	NA	NA	NA	Score=583;Name=lod=312	NA	8p22	NA	NA	NA	NA	rs1481907	0.08	0.08	0.08	0.0832668	0.1282	0.0248	0.0951	0.059	0.1217	0.13	0.02	0.11	0.05	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.039126	NA	NA	NA	NA	NA	0.094	NA	4.8718
1165	17	6225895	6225895	C	A	intergenic	WSCD1,AIPL1	dist=198148;dist=101164	NA	NA	ncRNA_exonic	ENSG00000262609	NA	NA	NA	Score=682;Name=lod=789	NA	17p13.2	NA	NA	NA	NA	rs12600964	0.21	0.21	0.197	0.188099	0.1282	0.2411	0.3112	0.1755	0.1247	0.14	0.26	0.26	0.22	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.377971	NA	NA	NA	NA	NA	0.116	NA	4.8718
1165	1	32542507	32542507	C	A	intronic	TMEM39B	NA	NA	NA	intronic	ENSG00000121775	NA	NA	NA	NA	NA	1p35.1	NA	Name=EBF	NA	NA	rs4317856	0.11	0.11	0.085	0.155551	0.0567	0.2341	0.1988	0.0537	0.2832	0.06	0.23	0.1	0.04	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.04015	NA	NA	0.071653	0.049133	NA	0.145	NA	4.871647
1165	12	124172731	124172731	G	A	intronic	TCTN2	NA	NA	NA	intronic	ENSG00000168778	NA	NA	NA	NA	NA	12q24.31	NA	Name=BATF,MEF2A,IRF4_(M-17),BCL11A,NFKB,SRF,JunD	NA	NA	rs7313032	0.33	0.33	0.327	0.336062	0.3748	0.0605	0.3012	0.5643	0.2965	0.38	0.06	0.32	0.57	0.3577	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.092159	NA	NA	0.396047	0.556741	NA	0.239	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000114236.2;CLNDSDB=.;CLNDSDBID=.	4.871453
1165	19	58962958	58962958	C	T	upstream	ZNF324B	NA	NA	NA	upstream	ENSG00000249471	NA	NA	NA	NA	NA	19q13.43	NA	Name=E2F4,POU2F2,GABP,TAF1,SREBP1,ETS1,NF-YA,Znf143_(16618-1-AP),SP2_(SC-643),YY1_(C-20),Pol2,SP1,Mxi1_(bHLH),Pol2(phosphoS2),NF-YB,Oct-2,Max,ELF1_(SC-631),CHD2_(N-1250),HA-E2F1,Pbx3,E2F1,Pol2-4H8,c-Fos,RFX5_(N-494),NANOG_(SC-33759),YY1,Egr-1,SIX5,ZBTB7A_(SC-34508),c-Myc,CCNT2,HEY1,TBP,IRF1,Nrf1,USF-1	Name=148	NA	rs893188	0.26	0.26	0.228	0.218251	0.2594	0.4236	0.1571	0.0779	0.1973	0.27	0.45	0.18	0.08	0.2533	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.516902	NA	NA	0.282521	0.099886	NA	0.188	NA	4.8714456
1165	5	145523105	145523105	G	A	exonic	LARS	NA	synonymous SNV	LARS:NM_020117:exon19:c.C1747T:p.L583L	exonic	ENSG00000133706	NA	synonymous SNV	ENSG00000133706:ENST00000274562:exon18:c.C1666T:p.L556L,ENSG00000133706:ENST00000510191:exon18:c.C1585T:p.L529L,ENSG00000133706:ENST00000545646:exon18:c.C1609T:p.L537L,ENSG00000133706:ENST00000394434:exon19:c.C1747T:p.L583L	NA	NA	5q32	NA	NA	NA	NA	rs11540217	0.2	0.2	0.17	0.181709	0.2525	0.1984	0.3775	0.0076	0.1881	0.25	0.2	0.3	0.02	0.2641	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.086287	NA	NA	0.278721	0.060145	NA	0.268	NA	4.8713456
1165	5	145543972	145543972	G	A	exonic	LARS	NA	synonymous SNV	LARS:NM_020117:exon6:c.C495T:p.G165G	exonic	ENSG00000133706	NA	synonymous SNV	ENSG00000133706:ENST00000274562:exon5:c.C414T:p.G138G,ENSG00000133706:ENST00000510191:exon5:c.C333T:p.G111G,ENSG00000133706:ENST00000545646:exon5:c.C357T:p.G119G,ENSG00000133706:ENST00000394434:exon6:c.C495T:p.G165G	NA	NA	5q32	NA	NA	NA	NA	rs3763373	0.2	0.2	0.17	0.181709	0.2525	0.1984	0.3775	0.0076	0.1881	0.25	0.2	0.3	0.02	0.264	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.050479	NA	NA	0.279186	0.060372	ID=COSM149968;OCCURENCE=1(stomach)	0.268	NA	4.8709806
1165	19	36302921	36302921	T	C	exonic	PRODH2	NA	synonymous SNV	PRODH2:NM_021232:exon5:c.A768G:p.P256P	exonic	ENSG00000250799	NA	synonymous SNV	ENSG00000250799:ENST00000301175:exon5:c.A768G:p.P256P	NA	NA	19q13.12	NA	NA	NA	NA	rs12462360	0.26	0.26	0.22	0.232029	0.2664	0.3194	0.2752	0.1377	0.2035	0.27	0.34	0.27	0.13	0.2622	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.53051	NA	NA	0.267093	0.147526	NA	0.239	NA	4.8709736
1165	8	81471733	81471733	T	C	intergenic	ZBTB10,ZNF704	dist=33233;dist=68953	NA	NA	ncRNA_exonic	ENSG00000188856	NA	NA	NA	Score=817;Name=lod=2780	NA	8q21.13	NA	NA	NA	NA	rs141315498	0.05	0.05	0.044	0.0593051	0.0338	0.1022	0.0418	0.0068	0.1247	0.03	0.11	0.05	0.01	0.0579	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.882067	NA	0.39	0.037477	0.020218	NA	0.036	NA	4.870823
1165	2	210044256	210044256	G	C	intergenic	PTH2R,MAP2	dist=685025;dist=244515	NA	NA	ncRNA_exonic	ENSG00000229670	NA	NA	NA	Score=622;Name=lod=450	NA	2q34	NA	NA	NA	NA	rs17738731	0.07	0.07	0.074	0.061901	0.1292	NA	0.0922	0.0318	0.0757	0.13	NA	0.11	0.02	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.095411	NA	NA	NA	NA	NA	0.087	NA	4.8708
1165	9	100008390	100008390	G	A	ncRNA_exonic	LOC100499484,LOC100499484-C9ORF174	NA	NA	NA	ncRNA_exonic	ENSG00000254483,ENSG00000254876,ENSG00000255036	NA	NA	NA	Score=498;Name=lod=141	NA	9q22.33	NA	NA	NA	NA	rs7020002	0.88	0.88	0.884	0.862021	0.7962	0.9425	0.8012	0.9644	0.7515	0.81	0.95	0.82	0.94	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.748781	1.748781	NA	NA	NA	NA	0.848	NA	4.8704666
1165	6	131505745	131505745	A	G	intronic	AKAP7	NA	NA	NA	ncRNA_exonic	ENSG00000218857	NA	NA	NA	Score=739;Name=lod=1339	NA	6q23.2	NA	NA	NA	NA	rs7768335	0.53	0.53	0.541	0.557508	0.4632	0.6935	0.4323	0.5189	0.6554	0.47	0.7	0.43	0.49	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.661002	NA	NA	NA	NA	NA	0.413	NA	4.8701333
1165	12	16553361	16553361	G	A	intergenic	MGST1,LMO3	dist=23238;dist=147945	NA	NA	ncRNA_exonic	ENSG00000256238	NA	NA	NA	Score=925;Name=lod=7683	NA	12p12.3	NA	NA	NA	NA	rs57886885	0.23	0.23	0.199	0.233427	0.1302	0.4345	0.255	0.177	0.1933	0.12	0.42	0.24	0.15	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.404109	NA	NA	NA	NA	NA	0.239	NA	4.8698
1165	8	22926498	22926498	G	A	ncRNA_UTR5	TNFRSF10B	NA	NA	NA	ncRNA_UTR5	ENSG00000120889	NA	NA	NA	NA	NA	8p21.3	NA	Name=eGFP-JunD,Pol2(phosphoS2),Pol2,Mxi1_(bHLH),SP1,POU2F2,TAF1,E2F6_(H-50),GTF2F1_(RAP-74),CTCF,Oct-2,Max,Pol2-4H8,Pol2(b),JunD,IRF1,TBP,HEY1,NFKB,c-Myc	NA	NA	rs11135695	0.26	0.26	0.278	0.252995	0.4125	0.0853	0.2536	0.2337	0.2873	0.41	0.09	0.26	0.22	0.3847	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.145001	NA	NA	NA	NA	NA	0.428	NA	4.8694666
1165	2	133402607	133402607	C	T	UTR3	LYPD1	NM_144586:c.*1011G>A,NM_001077427:c.*1011G>A	NA	NA	UTR3	ENSG00000150551	ENST00000397463:c.*1011G>A	NA	NA	NA	NA	2q21.2	NA	NA	Name=2	NA	rs1131671	0.45	0.45	0.425	0.474241	0.4642	0.3363	0.5	0.5514	0.5041	0.46	0.35	0.44	0.55	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.844335	NA	NA	NA	NA	NA	0.384	NA	4.8691334
1165	10	97006855	97006855	T	G	intronic	PDLIM1	NA	NA	NA	intronic	ENSG00000107438	NA	NA	NA	NA	NA	10q24.1	NA	Name=CTCF	NA	NA	rs17525659	0.07	0.07	0.058	0.0485224	0.1312	0.001	0.1023	0.0076	0.0297	0.13	0.0035	0.12	0.01	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.372601	NA	NA	NA	NA	NA	0.101	NA	4.8688
1165	14	35857714	35857714	C	A	intergenic	PSMA6,NFKBIA	dist=71032;dist=13002	NA	NA	ncRNA_exonic	ENSG00000240023	NA	NA	NA	Score=803;Name=lod=2450	NA	14q13.2	NA	NA	NA	NA	rs75426604	0.11	0.11	0.095	0.129193	0.1312	0.0238	0.098	0.1634	0.2117	0.12	0.03	0.1	0.17	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.558327	NA	NA	NA	NA	NA	0.116	NA	4.8688
1165	8	95690579	95690579	T	C	exonic	ESRP1	NA	synonymous SNV	ESRP1:NM_001034915:exon13:c.T1788C:p.N596N,ESRP1:NM_001122825:exon13:c.T1800C:p.N600N,ESRP1:NM_001122826:exon13:c.T1788C:p.N596N,ESRP1:NM_001122827:exon13:c.T1788C:p.N596N,ESRP1:NM_017697:exon13:c.T1800C:p.N600N	exonic	ENSG00000104413	NA	synonymous SNV	ENSG00000104413:ENST00000517610:exon10:c.T1377C:p.N459N,ENSG00000104413:ENST00000358397:exon13:c.T1788C:p.N596N,ENSG00000104413:ENST00000423620:exon13:c.T1788C:p.N596N,ENSG00000104413:ENST00000433389:exon13:c.T1800C:p.N600N,ENSG00000104413:ENST00000454170:exon13:c.T1800C:p.N600N	Score=531;Name=lod=192	NA	8q22.1	NA	NA	NA	NA	rs12677519	0.52	0.52	0.51	0.492412	0.6223	0.5407	0.5346	0.1914	0.6861	0.64	0.54	0.56	0.26	0.5759	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.143911	NA	NA	0.599929	0.268275	NA	0.536	NA	4.8685376
1165	5	147510866	147510866	T	C	exonic	SPINK5	NA	synonymous SNV	SPINK5:NM_006846:exon31:c.T3009C:p.G1003G,SPINK5:NM_001127698:exon32:c.T3099C:p.G1033G	exonic	ENSG00000133710	NA	synonymous SNV	ENSG00000133710:ENST00000256084:exon31:c.T3009C:p.G1003G,ENSG00000133710:ENST00000359874:exon32:c.T3099C:p.G1033G	Score=469;Name=lod=107	NA	5q32	NA	NA	NA	NA	rs2400478	0.51	0.51	0.485	0.509185	0.5924	0.4821	0.6398	0.3903	0.5194	0.56	0.46	0.59	0.43	0.5888	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.388575	NA	NA	0.617029	0.438696	ID=COSM149978,COSM149977;OCCURENCE=1(stomach)	0.478	NA	4.8684376
1165	7	107880612	107880612	A	G	UTR5	NRCAM	NM_001193584:c.-104T>C,NM_005010:c.-104T>C,NM_001193582:c.-104T>C,NM_001037132:c.-104T>C,NM_001193583:c.-104T>C	NA	NA	UTR5	ENSG00000091129	ENST00000413765:c.-104T>C,ENST00000379028:c.-104T>C,ENST00000351718:c.-104T>C,ENST00000379024:c.-104T>C,ENST00000379022:c.-104T>C,ENST00000417701:c.-104T>C,ENST00000442580:c.-104T>C,ENST00000456431:c.-104T>C,ENST00000419936:c.-104T>C,ENST00000418239:c.-104T>C	NA	NA	Score=436;Name=lod=79	NA	7q31.1	NA	NA	NA	NA	rs1269634	0.48	0.48	0.429	0.451677	0.4652	0.8304	0.5548	0.0794	0.4775	0.46	0.82	0.52	0.09	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.191244	NA	NA	NA	NA	NA	0.333	NA	4.8681334
1165	17	49231627	49231627	G	A	UTR5	NME1	NM_198175:c.-108G>A	NA	NA	UTR5	ENSG00000011052,ENSG00000239672	ENST00000555572:c.-108G>A;ENST00000336097:c.-108G>A,ENST00000480143:c.-108G>A,ENST00000013034:c.-108G>A,ENST00000456492:c.-108G>A	NA	NA	NA	NA	17q21.33	NA	NA	Name=26	NA	rs11556835	0.51	0.51	0.477	0.489018	0.4652	0.4008	0.4611	0.7065	0.3303	0.47	0.42	0.52	0.68	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.153009	NA	NA	NA	NA	NA	0.543	NA	4.8681334
1165	1	209965587	209965587	G	C	intronic	IRF6	NA	NA	NA	intronic	ENSG00000117595	NA	NA	NA	NA	NA	1q32.2	NA	Name=STAT3	Name=6	NA	rs2235375	0.4	0.4	0.366	0.405152	0.3608	0.5833	0.4798	0.2474	0.4274	0.37	0.57	0.44	0.24	0.4027	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.572555	NA	NA	0.368372	0.298003	NA	0.464	NA	4.868128
1165	14	107013129	107013129	A	C	intergenic	LINC00221,NONE	dist=61600;dist=NONE	NA	NA	exonic	ENSG00000211965	NA	nonsynonymous SNV	ENSG00000211965:ENST00000390625:exon2:c.T166G:p.F56V	Score=471;Name=lod=109	NA	14q32.33	NA	NA	NA	NA	rs2073674	0.39	0.39	0.355	0.392572	0.3151	0.4246	0.304	0.5234	0.3252	0.32	0.41	0.3	0.53	0.3406	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.948105	NA	1	0.309605	0.495481	NA	0.341	NA	4.8680284
1165	21	46011751	46011751	C	T	exonic	KRTAP10-6	NA	synonymous SNV	KRTAP10-6:NM_198688:exon1:c.G615A:p.T205T	exonic	ENSG00000188155	NA	synonymous SNV	ENSG00000188155:ENST00000400368:exon1:c.G615A:p.T205T	NA	NA	21q22.3	NA	NA	NA	NA	rs233305	0.72	0.72	0.78	NA	NA	NA	NA	NA	NA	0.85	0.69	0.83	0.46	0.7987	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.08938	NA	NA	NA	NA	NA	0.391	NA	4.8679666
1165	6	31243578	31243578	G	A	intergenic	HLA-C,HLA-B	dist=3665;dist=78071	NA	NA	ncRNA_exonic	ENSG00000214892	NA	NA	NA	Score=612;Name=lod=411	NA	6p21.33	NA	NA	NA	NA	rs73390981	0.1	0.1	0.075	0.0996406	0.1322	0.0367	0.1744	0.0946	0.0849	0.13	0.05	0.18	0.08	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.18005	NA	NA	NA	NA	NA	0.065	NA	4.8678
1165	9	138683798	138683798	C	T	intronic	KCNT1	NA	NA	NA	intronic	ENSG00000107147	NA	NA	NA	NA	NA	9q34.3	NA	NA	Name=3	NA	rs41310949	0.07	0.07	0.065	0.0894569	0.1322	0.001	0.0836	0.0514	0.1922	0.14	NA	0.1	0.04	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.034434	NA	NA	NA	NA	NA	0.13	NA	4.8678
1165	19	38985308	38985308	G	A	intronic	RYR1	NA	NA	NA	intronic	ENSG00000196218	NA	NA	NA	NA	NA	19q13.2	NA	NA	Name=4	NA	rs75563090	0.04	0.04	0.031	0.0315495	0.0557	0.0258	0.0331	0.0242	0.0215	0.06	0.01	0.05	0.02	0.0391	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.708375	NA	NA	0.037951	0.023626	NA	0.014	NA	4.867249
1165	15	45456764	45456764	A	G	intronic	DUOX1	NA	NA	NA	ncRNA_intronic	ENSG00000259539	NA	NA	NA	NA	NA	15q21.1	NA	Name=CEBPB	NA	NA	rs1648313	0.69	0.69	0.692	0.71226	0.4662	0.9246	0.6758	0.8139	0.635	0.45	0.97	0.63	0.77	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.975277	NA	NA	NA	NA	NA	0.63	NA	4.8671333
1165	15	66853339	66853339	C	T	intronic	LCTL	NA	NA	NA	intronic	ENSG00000188501	NA	NA	NA	Score=487;Name=lod=127	NA	15q22.31	NA	NA	NA	NA	rs75625666	0.05	0.05	0.035	0.0595048	0.0427	0.0546	0.0317	0.0726	0.0838	0.04	0.04	0.04	0.07	0.0495	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.341252	NA	NA	0.040823	0.06179	NA	0.022	NA	4.866977
1165	1	16069644	16069644	C	T	exonic	TMEM82	NA	synonymous SNV	TMEM82:NM_001013641:exon3:c.C291T:p.L97L	exonic	ENSG00000162460	NA	synonymous SNV	ENSG00000162460:ENST00000375782:exon3:c.C291T:p.L97L	NA	NA	1p36.21	NA	NA	NA	NA	rs11584945	0.19	0.19	0.201	0.185304	0.2883	0.0337	0.1744	0.23	0.183	0.28	0.04	0.2	0.22	0.234	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.441404	1.441404	NA	0.27739	0.208901	NA	0.232	NA	4.8669766
1165	6	29911893	29911893	C	T	intronic	HLA-A	NA	NA	NA	intronic	ENSG00000206503	NA	NA	NA	NA	NA	6p22.1	NA	Name=Pol2-4H8	Name=2	NA	rs9260172	NA	NA	0.321	0.386182	0.4026	0.4514	0.4337	0.3623	0.3006	NA	NA	NA	NA	0.3763	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.350625	NA	NA	0.35419	0.280212	NA	0.022	NA	4.86691
1165	11	130417117	130417117	G	C	intergenic	ADAMTS15,C11orf44	dist=70578;dist=125734	NA	NA	ncRNA_exonic	ENSG00000236616	NA	NA	NA	Score=385;Name=lod=49	NA	11q24.3	NA	NA	NA	NA	rs2703751	0.15	0.15	0.163	0.140775	0.1332	0.001	0.1066	0.3374	0.0511	0.14	0.0017	0.11	0.36	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.090478	NA	NA	NA	NA	NA	0.145	NA	4.8668
1165	8	134062327	134062327	T	G	intronic	SLA,TG	NA	NA	NA	intronic	ENSG00000042832,ENSG00000155926	NA	NA	NA	NA	NA	8q24.22	NA	NA	Name=4	NA	rs2702972	0.25	0.25	0.225	0.278554	0.1332	0.5288	0.2839	0.1067	0.3988	0.12	0.56	0.26	0.1	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.405104	NA	NA	NA	NA	NA	0.167	NA	4.8668
1165	18	22901967	22901967	T	C	intronic	ZNF521	NA	NA	NA	intronic	ENSG00000198795	NA	NA	NA	Score=613;Name=lod=415	NA	18q11.2	NA	NA	NA	NA	rs45590038	0.02	0.02	0.018	0.0181709	0.0417	0.001	0.0173	NA	0.0368	0.04	NA	0.03	NA	0.0401	0.051	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.931279	2.931279	NA	0.051512	0.008398	NA	0.022	NA	4.866688
1165	2	232072912	232072912	T	C	exonic	ARMC9	NA	synonymous SNV	ARMC9:NM_025139:exon3:c.T124C:p.L42L	exonic	ENSG00000135931	NA	synonymous SNV	ENSG00000135931:ENST00000349938:exon3:c.T124C:p.L42L,ENSG00000135931:ENST00000440107:exon3:c.T124C:p.L42L	NA	NA	2q37.1	NA	NA	NA	NA	rs11558174	0.27	0.27	0.245	0.248003	0.2853	0.1409	0.2349	0.3563	0.183	0.29	0.17	0.28	0.34	0.259	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.720992	NA	NA	0.255698	0.363533	ID=COSM149093,COSM149092;OCCURENCE=1(stomach)	0.319	NA	4.8666686
1165	17	45821844	45821844	C	G	intronic	TBX21	NA	NA	NA	intronic	ENSG00000073861	NA	NA	NA	Score=618;Name=lod=432	NA	17q21.32	NA	NA	NA	NA	rs17250953	0.02	0.02	0.011	0.0175719	0.0388	NA	0.049	0.0023	0.0123	0.03	NA	0.06	NA	0.0398	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.486942	1.486942	NA	0.054767	0.012483	NA	NA	NA	4.866633
1165	19	56423893	56423893	G	A	exonic	NLRP13	NA	synonymous SNV	NLRP13:NM_176810:exon5:c.C1290T:p.T430T	exonic	ENSG00000173572	NA	synonymous SNV	ENSG00000173572:ENST00000342929:exon5:c.C1290T:p.T430T,ENSG00000173572:ENST00000588751:exon5:c.C1290T:p.T430T	Score=336;Name=lod=31	NA	19q13.43	NA	NA	NA	NA	rs303998	0.62	0.62	0.629	0.648762	0.5905	0.7302	0.5058	0.6853	0.6769	0.58	0.71	0.53	0.67	0.6011	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.332538	NA	NA	0.608837	0.664775	NA	0.725	NA	4.8662296
1165	16	53524308	53524308	G	C	UTR3	RBL2	NM_005611:c.*96G>C	NA	NA	UTR3	ENSG00000103479	ENST00000262133:c.*96G>C,ENST00000544545:c.*96G>C	NA	NA	NA	NA	16q12.2	NA	NA	Name=2	NA	rs3929	0.45	0.45	0.481	0.498802	0.4672	0.1835	0.4035	0.823	0.4857	0.45	0.15	0.45	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.071484	NA	NA	NA	NA	NA	0.616	NA	4.8661334
1165	4	100266112	100266112	C	T	exonic	ADH1C	NA	unknown	UNKNOWN	exonic	ENSG00000248144	NA	unknown	UNKNOWN	Score=399;Name=lod=56	NA	4q23	NA	NA	NA	NA	rs1693425	0.24	0.24	0.198	0.214457	0.4046	0.0764	0.2709	0.0998	0.2761	0.42	0.07	0.31	0.12	0.343	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.650355	NA	NA	0.386279	0.149796	NA	0.232	NA	4.866121
1165	8	134062331	134062331	G	A	intronic	SLA,TG	NA	NA	NA	intronic	ENSG00000042832,ENSG00000155926	NA	NA	NA	NA	NA	8q24.22	NA	NA	Name=4	NA	rs2741194	0.24	0.24	0.214	0.269569	0.1342	0.4851	0.2839	0.1067	0.3967	0.12	0.52	0.26	0.1	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.022753	NA	NA	NA	NA	NA	0.138	NA	4.8658
1165	11	64950843	64950843	A	T	intronic	CAPN1	NA	NA	NA	UTR5	ENSG00000014216	ENST00000526468:c.-80A>T	NA	NA	NA	NA	11q13.1	NA	NA	Name=17	NA	rs2277307	0.26	0.26	0.234	0.244609	0.3012	0.2966	0.4035	0.053	0.2791	0.31	0.28	0.35	0.07	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.031231	NA	NA	NA	NA	NA	0.29	NA	4.8654667
1165	1	35470877	35470877	A	T	intronic	ZMYM6	NA	NA	NA	intronic	ENSG00000163867,ENSG00000271741	NA	NA	NA	Score=361;Name=lod=39	NA	1p34.3	NA	NA	NA	NA	rs10158284	0.14	0.14	0.141	0.13139	0.0258	0.381	0.0591	0.0923	0.0869	0.02	0.38	0.06	0.09	0.08	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.583328	NA	NA	0.028953	0.082842	NA	0.072	NA	4.865247
1165	12	62274027	62274027	C	T	intronic	FAM19A2	NA	NA	NA	ncRNA_exonic	ENSG00000257528	NA	NA	NA	Score=652;Name=lod=593	NA	12q14.1	NA	NA	NA	NA	rs7311923	0.36	0.36	0.33	0.351438	0.4682	0.3323	0.4222	0.1823	0.4294	0.49	0.32	0.41	0.19	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.014612	NA	NA	NA	NA	NA	0.268	NA	4.8651333
1165	X	1422868	1422868	G	A	exonic	CSF2RA	NA	synonymous SNV	CSF2RA:NM_001161532:exon9:c.G600A:p.V200V,CSF2RA:NM_001161530:exon10:c.G1101A:p.V367V,CSF2RA:NM_001161531:exon11:c.G999A:p.V333V,CSF2RA:NM_006140:exon11:c.G999A:p.V333V,CSF2RA:NM_172245:exon11:c.G999A:p.V333V,CSF2RA:NM_001161529:exon12:c.G999A:p.V333V	exonic	ENSG00000198223	NA	synonymous SNV	ENSG00000198223:ENST00000501036:exon9:c.G600A:p.V200V,ENSG00000198223:ENST00000417535:exon10:c.G1101A:p.V367V,ENSG00000198223:ENST00000381509:exon11:c.G999A:p.V333V,ENSG00000198223:ENST00000381524:exon11:c.G999A:p.V333V,ENSG00000198223:ENST00000381529:exon11:c.G999A:p.V333V,ENSG00000198223:ENST00000432318:exon12:c.G999A:p.V333V	NA	NA	Xp22.33	NA	NA	NA	NA	rs28460440	0.34	0.34	0.32591	NA	NA	NA	NA	NA	NA	0.4	0.31	0.32	0.29	0.3715	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.710198	NA	NA	0.430051	0.281888	NA	0.348	NA	4.8651156
1166	2	220353013	220353013	G	A	exonic	SPEG	NA	synonymous SNV	SPEG:NM_005876:exon32:c.G7839A:p.P2613P	exonic	ENSG00000072195	NA	synonymous SNV	ENSG00000072195:ENST00000312358:exon32:c.G7839A:p.P2613P	NA	NA	2q35	NA	NA	NA	NA	rs875098	0.24	0.24	0.249	0.286342	0.2724	0.1468	0.2709	0.2905	0.4499	0.27	0.16	0.29	0.26	0.2761	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.56904	NA	NA	0.253271	0.262671	NA	0.159	NA	4.8648956
1166	3	170723664	170723664	A	G	intronic	SLC2A2	NA	NA	NA	intronic	ENSG00000163581	NA	NA	NA	NA	NA	3q26.2	NA	NA	Name=54	NA	rs2292622	0.18	0.18	0.182	0.199481	0.1352	0.0169	0.1715	0.4289	0.1636	0.14	0.02	0.19	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.237586	NA	NA	NA	NA	NA	0.333	NA	4.8648
1166	3	170723668	170723668	C	T	intronic	SLC2A2	NA	NA	NA	intronic	ENSG00000163581	NA	NA	NA	NA	NA	3q26.2	NA	NA	Name=54	NA	rs2292621	0.17	0.17	0.183	0.195288	0.1352	0.0169	0.17	0.4138	0.1636	0.14	0.02	0.19	0.4	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.640487	NA	NA	NA	NA	NA	0.333	NA	4.8648
1166	8	29886157	29886157	G	A	intergenic	MIR3148,MIR548O2	dist=71293;dist=34101	NA	NA	ncRNA_exonic	ENSG00000254013	NA	NA	NA	Score=600;Name=lod=367	NA	8p12	NA	NA	NA	NA	rs112865584	0.06	0.06	0.063	0.0601038	0.1352	0.002	0.0519	0.0076	0.1196	0.14	NA	0.04	0.01	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.535109	NA	NA	NA	NA	NA	0.051	NA	4.8648
1166	12	51203376	51203376	T	C	intronic	ATF1	NA	NA	NA	intronic	ENSG00000123268	NA	NA	NA	Score=559;Name=lod=250	NA	12q13.12	NA	Name=GATA-1	NA	NA	rs4986838	0.32	0.32	0.302	0.318291	0.3877	0.2619	0.2608	0.292	0.3814	0.38	0.31	0.26	0.29	0.3439	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.19684	NA	NA	0.403605	0.307989	NA	0.297	NA	4.864795
1166	22	30138497	30138497	G	A	intronic	ZMAT5	NA	NA	NA	intronic	ENSG00000100319	NA	NA	NA	NA	NA	22q12.2	NA	NA	Name=4	NA	rs60102307	0.03	0.03	0.033	0.0403355	0.0358	0.0337	0.0202	0.0227	0.09	0.04	0.03	0.03	0.03	0.0522	0.054	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.479562	NA	NA	0.047442	0.02837	NA	0.036	NA	4.864558
1166	5	1202000	1202000	C	T	intronic	SLC6A19	NA	NA	NA	intronic	ENSG00000174358	NA	NA	NA	NA	NA	5p15.33	NA	NA	Name=4	NA	rs13188787	0.02	0.02	0.024	0.0179712	0.0427	NA	0.0202	0.0061	0.0256	0.04	NA	0.02	0.02	0.0439	0.049	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.136084	NA	NA	0.048846	0.007081	NA	0.014	NA	4.864554
1166	13	75884290	75884290	G	A	intronic	TBC1D4	NA	NA	NA	intronic	ENSG00000136111	NA	NA	NA	Score=474;Name=lod=113	NA	13q22.2	NA	NA	NA	NA	rs2297203	0.26	0.26	0.263	0.226038	0.3748	0.1865	0.3732	0.0809	0.2055	0.37	0.19	0.37	0.11	0.3575	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.563268	1.563268	NA	0.403241	0.139729	ID=COSM147701;OCCURENCE=1(stomach)	0.312	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118588.2;CLNDSDB=.;CLNDSDBID=.	4.864459
1166	10	131967693	131967693	T	A	intronic	GLRX3	NA	NA	NA	intronic	ENSG00000108010	NA	NA	NA	Score=645;Name=lod=559	NA	10q26.3	NA	NA	Name=41	NA	rs17297984	0.27	0.27	0.25	0.280551	0.4036	0.1915	0.2291	0.1884	0.407	0.41	0.17	0.23	0.2	0.3457	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.905625	1.905625	NA	0.386512	0.204948	NA	0.319	NA	4.864188
1166	15	78200707	78200707	G	A	intergenic	LOC253044,LOC645752	dist=259126;dist=5852	NA	NA	intergenic	ENSG00000260139,ENSG00000260776	dist=3691;dist=5852	NA	NA	NA	NA	15q24.3	NA	Name=CTCF_(SC-5916),ZNF263,c-Myc,PAX5-C20,CTCF_(C-20),CTCFL_(SC-98982),SMC3_(ab9263),CTCF	Name=103	NA	rs12910067	0.31	0.31	0.251	0.256989	0.4692	0.1597	0.2695	0.1891	0.2219	0.46	0.18	0.31	0.21	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.211409	NA	NA	NA	NA	NA	0.37	NA	4.8641334
1166	5	77081797	77081797	G	A	intergenic	TBCA,AP3B1	dist=9612;dist=216353	NA	NA	ncRNA_exonic	ENSG00000213763	NA	NA	NA	Score=867;Name=lod=4445	NA	5q14.1	NA	NA	NA	NA	rs62364880	0.06	0.06	0.053	0.0455272	0.1362	NA	0.0836	0.0038	0.0286	0.14	NA	0.08	0.0041	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.282161	NA	NA	NA	NA	NA	0.022	NA	4.8638
1166	5	177398968	177398968	A	T	intergenic	LOC728554,PROP1	dist=87699;dist=20268	NA	NA	ncRNA_exonic	ENSG00000249129	NA	NA	NA	Score=730;Name=lod=1231	NA	5q35.3	NA	NA	NA	NA	rs7703216	0.12	0.12	0.103	0.117013	0.1362	0.2024	0.0879	0.0779	0.0828	0.12	0.18	0.09	0.06	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.213181	NA	NA	NA	NA	NA	0.116	NA	4.8638
1166	16	2105335	2105335	C	G	intronic	TSC2	NA	NA	NA	intronic	ENSG00000103197	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs2516734	0.15	0.15	0.145	0.153355	0.1362	NA	0.1513	0.3744	0.0317	0.13	NA	0.14	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.72092	NA	NA	NA	NA	NA	0.232	CLINSIG=untested;CLNDBN=Tuberous_sclerosis_syndrome;CLNREVSTAT=not;CLNACC=RCV000043225.2;CLNDSDB=GeneReviews:MedGen:OMIM:SNOMED_CT;CLNDSDBID=NBK1220:C0041341:191100:7199000	4.8638
1166	16	71779310	71779310	G	T	intronic	AP1G1	NA	NA	NA	intronic	ENSG00000166747	NA	NA	NA	Score=272;Name=lod=17	NA	16q22.2	NA	NA	NA	NA	rs74980679	0.08	0.08	0.069	0.0740815	0.1362	0.0417	0.0591	0.0098	0.1411	0.15	0.05	0.08	0.01	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.187269	NA	NA	NA	NA	NA	0.043	NA	4.8638
1166	6	169640511	169640511	G	A	intronic	THBS2	NA	NA	NA	intronic	ENSG00000186340	NA	NA	NA	NA	NA	6q27	NA	NA	Name=5	NA	rs56132110	0.02	0.02	0.02	0.0141773	0.0507	NA	0.0202	0.0008	0.0051	0.05	NA	0.02	NA	0.0309	0.055	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.799271	NA	NA	0.054651	0.009759	NA	NA	NA	4.863749
1166	2	220354365	220354365	C	T	exonic	SPEG	NA	synonymous SNV	SPEG:NM_005876:exon36:c.C8625T:p.F2875F	exonic	ENSG00000072195	NA	synonymous SNV	ENSG00000072195:ENST00000312358:exon36:c.C8625T:p.F2875F	NA	NA	2q35	NA	NA	NA	NA	rs56132883	0.24	0.24	0.221	0.286542	0.2734	0.1468	0.2723	0.2905	0.4489	0.27	0.16	0.3	0.26	0.2751	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.926339	NA	NA	0.254578	0.261358	NA	0.058	NA	4.8635886
1166	10	100148308	100148308	T	G	intronic	PYROXD2	NA	NA	NA	intronic	ENSG00000119943	NA	NA	NA	NA	NA	10q24.2	NA	Name=CTCF,CTCF_(SC-5916)	Name=9	NA	rs2147895	0.48	0.48	0.465	0.514577	0.334	0.5744	0.4755	0.6082	0.5399	0.34	0.58	0.45	0.6	0.4515	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.847321	NA	NA	0.351024	0.548042	NA	0.391	NA	4.863476
1166	8	29885706	29885706	C	T	intergenic	MIR3148,MIR548O2	dist=70842;dist=34552	NA	NA	ncRNA_exonic	ENSG00000254013	NA	NA	NA	Score=798;Name=lod=2339	NA	8p12	NA	NA	NA	NA	rs17489292	0.06	0.06	0.06	0.067492	0.1372	0.002	0.0548	0.0325	0.1196	0.14	NA	0.04	0.03	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.336716	NA	NA	NA	NA	NA	0.058	NA	4.8628
1166	1	42878153	42878153	G	A	intronic	RIMKLA	NA	NA	NA	ncRNA_exonic	ENSG00000235002	NA	NA	NA	Score=732;Name=lod=1263	NA	1p34.2	NA	NA	NA	NA	rs9803894	0.33	0.33	0.32	0.312101	0.4712	0.1161	0.3804	0.2958	0.3241	0.47	0.13	0.42	0.28	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.898352	NA	NA	NA	NA	NA	0.341	NA	4.8621333
1166	9	75270833	75270833	A	T	intronic	TMC1	NA	NA	NA	ncRNA_exonic	ENSG00000236862	NA	NA	NA	Score=651;Name=lod=588	NA	9q21.13	NA	NA	NA	NA	rs7852383	0.5	0.5	0.489	0.503195	0.4712	0.4435	0.4726	0.6543	0.4151	0.46	0.47	0.49	0.59	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.062741	NA	NA	NA	NA	NA	0.478	NA	4.8621333
1166	6	38723670	38723670	A	G	intronic	DNAH8	NA	NA	NA	intronic	ENSG00000124721	NA	NA	NA	NA	NA	6p21.2	NA	Name=c-Fos	NA	NA	rs7773138	0.14	0.14	0.121	0.123602	0.1382	0.0218	0.2478	0.1876	0.0389	0.14	0.02	0.22	0.19	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.032061	NA	NA	NA	NA	NA	0.217	NA	4.8618
1166	11	35882499	35882499	C	T	intergenic	TRIM44,LDLRAD3	dist=51569;dist=83113	NA	NA	ncRNA_exonic	ENSG00000186082	NA	NA	NA	Score=578;Name=lod=299	NA	11p13	NA	NA	NA	NA	rs60468632	0.15	0.15	0.123	0.167931	0.1382	0.2202	0.1354	0.0749	0.2935	0.15	0.21	0.15	0.08	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.580895	NA	0.04	NA	NA	NA	0.123	NA	4.8618
1166	20	60962624	60962624	T	C	intronic	RPS21	NA	NA	NA	intronic	ENSG00000171858	NA	NA	NA	NA	NA	20q13.33	NA	Name=Pol2,HA-E2F1,CTCF_(SC-5916)	Name=7	NA	rs755726	0.37	0.37	0.377	0.406749	0.3926	0.1558	0.3905	0.5711	0.4693	0.39	0.11	0.43	0.6	0.3769	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.109638	NA	NA	0.368721	0.532229	NA	0.471	NA	4.861779
1166	11	65063553	65063553	A	T	intronic	POLA2	NA	NA	NA	UTR3	ENSG00000014138	ENST00000527850:c.*1500A>T,ENST00000541089:c.*29A>T	NA	NA	NA	NA	11q13.1	NA	Name=SP1,FOXA1_(SC-101058),FOXA1_(C-20)	NA	NA	rs626555	0.2	0.2	0.195	0.230232	0.1392	0.0645	0.1628	0.4713	0.2168	0.13	0.08	0.17	0.46	0.1662	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.457699	NA	NA	NA	NA	NA	0.246	NA	4.8612667
1166	9	128026278	128026278	G	T	intronic	GAPVD1	NA	NA	NA	ncRNA_exonic	ENSG00000214593	NA	NA	NA	Score=739;Name=lod=1343	NA	9q33.3	NA	NA	NA	NA	rs35216121	0.48	0.48	0.518	0.483626	0.4722	0.4772	0.3631	0.5371	0.5153	0.49	0.47	0.34	0.57	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.238633	NA	NA	NA	NA	NA	0.442	NA	4.8611333
1166	1	45806933	45806933	G	A	intronic	TOE1	NA	NA	NA	intronic	ENSG00000132773	NA	NA	NA	NA	NA	1p34.1	NA	Name=Pol2	NA	NA	rs61789859	0.03	0.03	0.039	0.0255591	0.0447	0.001	0.0432	0.0303	0.0123	0.05	NA	0.04	0.05	0.0388	0.056	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.51629	NA	NA	0.055465	0.043123	NA	0.029	NA	4.861035
1166	9	139311471	139311471	C	T	exonic	PMPCA	NA	synonymous SNV	PMPCA:NM_015160:exon7:c.C702T:p.N234N	exonic	ENSG00000165688	NA	synonymous SNV	ENSG00000165688:ENST00000399219:exon6:c.C309T:p.N103N,ENSG00000165688:ENST00000371717:exon7:c.C702T:p.N234N	NA	NA	9q34.3	NA	NA	NA	NA	rs3812581	0.2	0.2	0.178	0.196286	0.2744	0.1637	0.3069	0.0598	0.2556	0.27	0.16	0.26	0.07	0.2487	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.19308	NA	NA	0.282674	0.094871	NA	0.203	NA	4.8608926
1166	6	71318507	71318507	A	T	intergenic	C6orf57,SMAP1	dist=19901;dist=58972	NA	NA	ncRNA_exonic	ENSG00000232389	NA	NA	NA	Score=772;Name=lod=1830	NA	6q13	NA	NA	NA	NA	rs111736257	0.09	0.09	0.083	0.0874601	0.1392	0.0288	0.0879	0.0514	0.1431	0.15	0.03	0.1	0.06	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.287827	1.287827	NA	NA	NA	NA	0.036	NA	4.8608
1166	6	80036415	80036415	G	A	intergenic	LOC100288198,LCA5	dist=89898;dist=158293	NA	NA	ncRNA_exonic	ENSG00000217786	NA	NA	NA	Score=474;Name=lod=113	NA	6q14.1	NA	NA	NA	NA	rs7770603	0.13	0.13	0.124	0.13738	0.1392	0.0734	0.0937	0.1747	0.182	0.12	0.08	0.09	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.13198	NA	NA	NA	NA	NA	0.145	NA	4.8608
1166	6	123127597	123127597	G	A	intronic	SMPDL3A	NA	NA	NA	intronic	ENSG00000172594	NA	NA	NA	NA	NA	6q22.31	NA	NA	Name=42	NA	rs13192569	0.13	0.13	0.128	0.163139	0.1392	0.1687	0.0821	0.1694	0.2311	0.15	0.15	0.08	0.11	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.895283	NA	NA	NA	NA	NA	0.087	NA	4.8608
1166	3	160942667	160942667	T	C	intronic	NMD3	NA	NA	NA	intronic	ENSG00000169251	NA	NA	NA	NA	NA	3q26.1	NA	NA	Name=6	NA	rs76866405	0.09	0.09	0.106	0.127396	0.0308	0.122	0.0764	0.1793	0.1984	0.03	0.12	0.05	0.2	0.0727	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.086412	NA	NA	0.036304	0.136033	NA	0.145	NA	4.860196
1166	8	76476396	76476396	G	A	UTR3	HNF4G	NM_004133:c.*65G>A	NA	NA	UTR3	ENSG00000164749	ENST00000354370:c.*65G>A,ENST00000396423:c.*65G>A	NA	NA	Score=397;Name=lod=55	NA	8q21.11	NA	NA	NA	NA	rs1805100	0.5	0.5	0.537	0.497005	0.4732	0.3214	0.3775	0.7731	0.4141	0.48	0.36	0.38	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.174722	2.174722	NA	NA	NA	NA	0.493	NA	4.8601334
1166	1	184536171	184536171	T	C	intronic	C1orf21	NA	NA	NA	ncRNA_exonic	ENSG00000232036	NA	NA	NA	Score=511;Name=lod=159	NA	1q25.3	NA	NA	NA	NA	rs749214	0.61	0.61	0.624	0.63139	0.4732	0.5913	0.5908	0.9508	0.4325	0.47	0.55	0.56	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.136535	NA	NA	NA	NA	NA	0.616	NA	4.8601333
1166	3	49813013	49813013	C	T	intronic	IP6K1	NA	NA	NA	ncRNA_exonic	ENSG00000244730	NA	NA	NA	Score=693;Name=lod=877	NA	3p21.31	NA	NA	NA	NA	rs34451146	0.39	0.39	0.406	0.402356	0.4732	0.1696	0.3487	0.5847	0.3609	0.46	0.18	0.34	0.55	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.102899	NA	NA	NA	NA	NA	0.362	NA	4.8601333
1166	6	31239141	31239141	C	T	intronic	HLA-C	NA	NA	NA	intronic	ENSG00000204525	NA	NA	NA	NA	NA	6p21.33	NA	Name=Pol2	Name=74	NA	rs9264661	0.58	0.58	0.486	NA	NA	NA	NA	NA	NA	0.55	0.51	0.64	0.65	0.5904	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.091475	NA	NA	0.54979	0.666423	NA	0.232	NA	4.85981
1166	2	136956733	136956733	T	C	intergenic	CXCR4,THSD7B	dist=81008;dist=791729	NA	NA	ncRNA_exonic	ENSG00000227347	NA	NA	NA	Score=671;Name=lod=713	NA	2q22.1	NA	NA	NA	NA	rs7578292	0.21	0.21	0.194	0.193291	0.1402	0.3373	0.1585	0.1233	0.2188	0.14	0.39	0.19	0.12	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.34936	NA	NA	NA	NA	NA	0.232	NA	4.8598
1166	3	170213372	170213372	G	T	intronic	SLC7A14	NA	NA	NA	intronic	ENSG00000013293,ENSG00000013297	NA	NA	NA	Score=309;Name=lod=24	NA	3q26.2	NA	NA	NA	NA	rs11718669	0.18	0.18	0.182	0.204673	0.1402	NA	0.1095	0.5325	0.1063	0.13	NA	0.1	0.53	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.266699	NA	NA	NA	NA	NA	0.283	NA	4.8598
1166	6	29912925	29912925	A	G	intronic	HLA-A	NA	NA	NA	intronic	ENSG00000206503	NA	NA	NA	NA	NA	6p22.1	NA	Name=Pol2,Pol2-4H8	NA	NA	rs2735102	0.18	0.18	0.154	0.15016	0.1402	0.0873	0.121	0.2141	0.1595	0.15	0.16	0.18	0.26	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.54604	NA	NA	NA	NA	NA	0.08	NA	4.8598
1166	7	149018975	149018975	T	C	intergenic	LOC155060,ZNF777	dist=24572;dist=109479	NA	NA	ncRNA_exonic	ENSG00000231397	NA	NA	NA	Score=623;Name=lod=455	NA	7q36.1	NA	NA	NA	NA	rs886714	0.11	0.11	0.106	0.0942492	0.1402	NA	0.1167	0.1664	0.0307	0.15	NA	0.14	0.18	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.232735	NA	NA	NA	NA	NA	0.138	NA	4.8598
1166	14	23282449	23282449	C	T	exonic	SLC7A7	NA	synonymous SNV	SLC7A7:NM_001126105:exon3:c.G159A:p.S53S,SLC7A7:NM_001126106:exon3:c.G159A:p.S53S	exonic	ENSG00000155465	NA	synonymous SNV	ENSG00000155465:ENST00000397529:exon2:c.G159A:p.S53S,ENSG00000155465:ENST00000397532:exon2:c.G159A:p.S53S,ENSG00000155465:ENST00000555251:exon2:c.G159A:p.S53S,ENSG00000155465:ENST00000555911:exon2:c.G159A:p.S53S,ENSG00000155465:ENST00000556287:exon2:c.G159A:p.S53S,ENSG00000155465:ENST00000285850:exon3:c.G159A:p.S53S,ENSG00000155465:ENST00000397528:exon3:c.G159A:p.S53S,ENSG00000155465:ENST00000554758:exon3:c.G159A:p.S53S,ENSG00000155465:ENST00000555702:exon3:c.G159A:p.S53S,ENSG00000155465:ENST00000557129:exon3:c.G159A:p.S53S,ENSG00000155465:ENST00000557629:exon3:c.G159A:p.S53S,ENSG00000155465:ENST00000488800:exon5:c.G159A:p.S53S	NA	NA	14q11.2	Score=890;Name=V$ZID_01	NA	NA	NA	rs1805059	0.64	0.64	0.637	0.60603	0.5964	0.7857	0.7104	0.4947	0.5072	0.6	0.8	0.7	0.48	0.6073	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.115409	NA	NA	0.603372	0.482524	NA	0.493	NA	4.8595946
1166	9	130219669	130219669	C	T	exonic	LRSAM1	NA	synonymous SNV	LRSAM1:NM_001005374:exon5:c.C249T:p.I83I,LRSAM1:NM_138361:exon5:c.C249T:p.I83I,LRSAM1:NM_001005373:exon6:c.C249T:p.I83I,LRSAM1:NM_001190723:exon6:c.C249T:p.I83I	exonic	ENSG00000148356	NA	synonymous SNV	ENSG00000148356:ENST00000323301:exon5:c.C249T:p.I83I,ENSG00000148356:ENST00000373322:exon5:c.C249T:p.I83I,ENSG00000148356:ENST00000300417:exon6:c.C249T:p.I83I,ENSG00000148356:ENST00000373324:exon6:c.C249T:p.I83I	Score=391;Name=lod=52	NA	9q33.3	NA	NA	NA	NA	rs2243906	0.57	0.57	0.563	0.557508	0.6322	0.4137	0.6499	0.6067	0.4969	0.64	0.41	0.61	0.61	0.5868	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.542646	1.542646	NA	0.58814	0.639355	NA	0.464	NA	4.8595266
1166	19	11326125	11326125	C	T	exonic	DOCK6	NA	synonymous SNV	DOCK6:NM_020812:exon32:c.G4044A:p.P1348P	exonic	ENSG00000130158	NA	synonymous SNV	ENSG00000130158:ENST00000319867:exon18:c.G2061A:p.P687P,ENSG00000130158:ENST00000294618:exon32:c.G4044A:p.P1348P	Score=452;Name=lod=92	NA	19p13.2	NA	NA	NA	NA	rs2304154	0.49	0.49	0.473	0.452676	0.6272	0.5109	0.4899	0.2405	0.4734	0.62	0.5	0.53	0.26	0.5565	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.135439	NA	NA	0.623562	0.329111	NA	0.601	NA	4.8594046
1166	17	78073723	78073723	T	C	UTR3	CCDC40	NM_017950:c.*149T>C	NA	NA	UTR3	ENSG00000141519	ENST00000397545:c.*149T>C	NA	NA	NA	NA	17q25.3	NA	Name=MafF_(M8194),MafK_(SC-477),MafK_(ab50322)	NA	NA	rs2304852	0.47	0.47	0.513	0.493011	0.4742	0.4355	0.2882	0.6263	0.5368	0.47	0.48	0.28	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.543267	NA	NA	NA	NA	NA	0.449	NA	4.8591334
1166	11	5969185	5969185	A	G	exonic	OR56A3	NA	synonymous SNV	OR56A3:NM_001003443:exon1:c.A609G:p.Q203Q	exonic	ENSG00000184478	NA	synonymous SNV	ENSG00000184478:ENST00000329564:exon1:c.A609G:p.Q203Q	NA	NA	11p15.4	NA	NA	NA	NA	rs10769378	0.22	0.22	0.202	0.195887	0.2624	0.3016	0.281	0.0598	0.1421	0.26	0.3	0.27	0.06	0.2547	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.523041	NA	NA	0.290507	0.10403	NA	0.116	NA	4.8590596
1166	19	56423728	56423728	A	G	exonic	NLRP13	NA	synonymous SNV	NLRP13:NM_176810:exon5:c.T1455C:p.S485S	exonic	ENSG00000173572	NA	synonymous SNV	ENSG00000173572:ENST00000342929:exon5:c.T1455C:p.S485S,ENSG00000173572:ENST00000588751:exon5:c.T1455C:p.S485S	Score=259;Name=lod=15	NA	19q13.43	NA	NA	NA	NA	rs303999	0.64	0.64	0.636	0.664337	0.5915	0.7292	0.5086	0.733	0.6902	0.58	0.71	0.53	0.72	0.6073	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.035646	NA	NA	0.608837	0.70631	NA	0.681	NA	4.8590296
1166	3	113955820	113955820	G	C	exonic	ZNF80	NA	synonymous SNV	ZNF80:NM_007136:exon1:c.C102G:p.S34S	exonic	ENSG00000174255	NA	synonymous SNV	ENSG00000174255:ENST00000308095:exon1:c.C102G:p.S34S,ENSG00000174255:ENST00000482457:exon1:c.C102G:p.S34S	NA	NA	3q13.31	NA	NA	NA	NA	rs3732780	0.32	0.32	0.318	0.311502	0.2734	0.375	0.2594	0.3593	0.2577	0.26	0.39	0.27	0.38	0.2766	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.410619	NA	NA	0.257791	0.343168	NA	0.268	NA	4.8588756
1166	5	159437466	159437466	C	T	intronic	TTC1	NA	NA	NA	intronic	ENSG00000113312	NA	NA	NA	NA	NA	5q33.3	NA	Name=MafF_(M8194),ZNF263	NA	NA	rs961265	0.2	0.2	0.183	0.199681	0.1412	0.2857	0.2781	0.146	0.1881	0.13	0.32	0.24	0.15	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.376418	NA	NA	NA	NA	NA	0.174	NA	4.8588
1166	20	25141941	25141941	G	A	intergenic	LOC284798,ENTPD6	dist=12515;dist=34398	NA	NA	ncRNA_exonic	ENSG00000225344	NA	NA	NA	Score=497;Name=lod=139	NA	20p11.21	NA	NA	NA	NA	rs7274923	0.18	0.18	0.163	0.221246	0.1412	0.0228	0.2882	0.3759	0.2515	0.14	0.02	0.28	0.36	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.402652	NA	NA	NA	NA	NA	0.196	NA	4.8588
1166	20	25142020	25142020	G	A	intergenic	LOC284798,ENTPD6	dist=12594;dist=34319	NA	NA	ncRNA_exonic	ENSG00000225344	NA	NA	NA	Score=584;Name=lod=316	NA	20p11.21	NA	NA	NA	NA	rs73904007	0.18	0.18	0.166	0.221246	0.1412	0.0228	0.2882	0.3759	0.2515	0.14	0.02	0.28	0.36	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.275871	NA	NA	NA	NA	NA	0.196	NA	4.8588
1166	21	46011745	46011745	C	T	exonic	KRTAP10-6	NA	synonymous SNV	KRTAP10-6:NM_198688:exon1:c.G621A:p.S207S	exonic	ENSG00000188155	NA	synonymous SNV	ENSG00000188155:ENST00000400368:exon1:c.G621A:p.S207S	NA	NA	21q22.3	NA	NA	NA	NA	rs233304	0.75	0.75	0.79	NA	NA	NA	NA	NA	NA	0.87	0.7	0.84	0.56	0.8084	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.174553	NA	NA	NA	NA	NA	0.37	NA	4.8582666
1166	6	31244151	31244151	T	C	intergenic	HLA-C,HLA-B	dist=4238;dist=77498	NA	NA	ncRNA_exonic	ENSG00000214892	NA	NA	NA	Score=645;Name=lod=558	NA	6p21.33	NA	NA	NA	NA	rs111373731	0.15	0.15	0.135	0.168331	0.1421	0.0694	0.1974	0.2428	0.1759	0.13	0.1	0.2	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.771855	NA	NA	NA	NA	NA	0.116	NA	4.8579
1166	6	31244298	31244298	A	G	intergenic	HLA-C,HLA-B	dist=4385;dist=77351	NA	NA	ncRNA_exonic	ENSG00000214892	NA	NA	NA	Score=383;Name=lod=48	NA	6p21.33	NA	NA	NA	NA	rs111762561	0.15	0.15	0.11	0.168331	0.1421	0.0694	0.1974	0.2428	0.1759	0.13	0.1	0.2	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.928444	NA	NA	NA	NA	NA	NA	NA	4.8579
1166	6	31244436	31244436	C	G	intergenic	HLA-C,HLA-B	dist=4523;dist=77213	NA	NA	ncRNA_exonic	ENSG00000214892	NA	NA	NA	Score=419;Name=lod=67	NA	6p21.33	NA	NA	NA	NA	rs112613205	0.15	0.15	0.123	0.168331	0.1421	0.0694	0.1974	0.2428	0.1759	0.13	0.1	0.2	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.594942	NA	NA	NA	NA	NA	0.116	NA	4.8579
1166	6	31245213	31245213	A	G	intergenic	HLA-C,HLA-B	dist=5300;dist=76436	NA	NA	ncRNA_exonic	ENSG00000214892	NA	NA	NA	Score=798;Name=lod=2344	NA	6p21.33	NA	NA	NA	NA	rs113744451	0.15	0.15	0.126	0.168331	0.1421	0.0694	0.1974	0.2428	0.1759	0.13	0.1	0.2	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.471183	1.471183	NA	NA	NA	NA	0.116	NA	4.8579
1166	6	31245309	31245309	C	A	intergenic	HLA-C,HLA-B	dist=5396;dist=76340	NA	NA	ncRNA_exonic	ENSG00000214892	NA	NA	NA	Score=798;Name=lod=2344	NA	6p21.33	NA	NA	NA	NA	rs59751510	0.15	0.15	0.122	0.168331	0.1421	0.0694	0.1974	0.2428	0.1759	0.13	0.1	0.2	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.330482	1.330482	NA	NA	NA	NA	0.116	NA	4.8579
1166	6	31245931	31245931	T	A	intergenic	HLA-C,HLA-B	dist=6018;dist=75718	NA	NA	ncRNA_exonic	ENSG00000214892	NA	NA	NA	Score=798;Name=lod=2344	NA	6p21.33	NA	NA	NA	NA	rs77985136	0.15	0.15	0.111	0.168331	0.1421	0.0694	0.1974	0.2428	0.1759	0.13	0.1	0.2	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.227679	NA	NA	NA	NA	NA	0.116	NA	4.8579
1166	6	31246015	31246015	C	T	intergenic	HLA-C,HLA-B	dist=6102;dist=75634	NA	NA	ncRNA_exonic	ENSG00000214892	NA	NA	NA	Score=798;Name=lod=2344	NA	6p21.33	NA	NA	NA	NA	rs72855945	0.15	0.15	0.127	0.168331	0.1421	0.0694	0.1974	0.2428	0.1759	0.13	0.1	0.2	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.122818	NA	NA	NA	NA	NA	0.116	NA	4.8579
1166	6	31246095	31246095	T	C	intergenic	HLA-C,HLA-B	dist=6182;dist=75554	NA	NA	ncRNA_exonic	ENSG00000214892	NA	NA	NA	Score=798;Name=lod=2344	NA	6p21.33	NA	NA	NA	NA	rs66689394	0.15	0.15	0.114	0.168331	0.1421	0.0694	0.1974	0.2428	0.1759	0.13	0.09	0.2	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.047985	NA	NA	NA	NA	NA	0.101	NA	4.8579
1166	6	31246100	31246100	A	G	intergenic	HLA-C,HLA-B	dist=6187;dist=75549	NA	NA	ncRNA_exonic	ENSG00000214892	NA	NA	NA	Score=798;Name=lod=2344	NA	6p21.33	NA	NA	NA	NA	rs72855946	0.15	0.15	0.107	0.168331	0.1421	0.0694	0.1974	0.2428	0.1759	0.13	0.1	0.2	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.794864	NA	NA	NA	NA	NA	0.101	NA	4.8579
1166	6	31246119	31246119	T	C	intergenic	HLA-C,HLA-B	dist=6206;dist=75530	NA	NA	ncRNA_exonic	ENSG00000214892	NA	NA	NA	Score=798;Name=lod=2344	NA	6p21.33	NA	NA	NA	NA	rs73392819	0.14	0.14	0.112	0.168331	0.1421	0.0694	0.1974	0.2428	0.1759	0.13	0.1	0.19	0.19	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.111111	NA	NA	NA	NA	NA	0.101	NA	4.8579
1166	6	31246139	31246139	T	A	intergenic	HLA-C,HLA-B	dist=6226;dist=75510	NA	NA	ncRNA_exonic	ENSG00000214892	NA	NA	NA	Score=798;Name=lod=2344	NA	6p21.33	NA	NA	NA	NA	rs72855948	0.15	0.15	0.114	0.168331	0.1421	0.0694	0.1974	0.2428	0.1759	0.13	0.1	0.2	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.311454	NA	NA	NA	NA	NA	0.029	NA	4.8579
1166	6	31246177	31246177	G	A	intergenic	HLA-C,HLA-B	dist=6264;dist=75472	NA	NA	ncRNA_exonic	ENSG00000214892	NA	NA	NA	Score=798;Name=lod=2344	NA	6p21.33	NA	NA	NA	NA	rs67853874	0.15	0.15	0.13	0.168331	0.1421	0.0694	0.1974	0.2428	0.1759	0.13	0.1	0.2	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.010174	NA	NA	NA	NA	NA	0.094	NA	4.8579
1166	6	31246410	31246410	G	A	intergenic	HLA-C,HLA-B	dist=6497;dist=75239	NA	NA	ncRNA_exonic	ENSG00000214892	NA	NA	NA	Score=621;Name=lod=445	NA	6p21.33	NA	NA	NA	NA	rs67772234	0.15	0.15	0.128	0.168331	0.1421	0.0694	0.1974	0.2428	0.1759	0.13	0.1	0.2	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.316786	1.316786	NA	NA	NA	NA	0.065	NA	4.8579
1166	6	31246450	31246450	T	C	intergenic	HLA-C,HLA-B	dist=6537;dist=75199	NA	NA	ncRNA_exonic	ENSG00000214892	NA	NA	NA	Score=621;Name=lod=445	NA	6p21.33	NA	NA	NA	NA	rs111689981	0.15	0.15	0.113	0.168331	0.1421	0.0694	0.1974	0.2428	0.1759	0.13	0.1	0.2	0.2	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.042658	NA	NA	NA	NA	NA	0.072	NA	4.8579
1166	10	124045488	124045488	C	T	intronic	BTBD16	NA	NA	NA	intronic	ENSG00000138152	NA	NA	NA	NA	NA	10q26.13	NA	NA	Name=6	NA	rs2181161	0.16	0.16	0.154	0.138379	0.1421	0.3006	0.0865	0.0182	0.1667	0.14	0.33	0.1	0.02	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.701577	NA	NA	NA	NA	NA	0.152	NA	4.8579
1166	19	49400511	49400511	T	C	intronic	TULP2	NA	NA	NA	intronic	ENSG00000104804	NA	NA	NA	NA	NA	19q13.33	NA	Name=Egr-1	NA	NA	rs73061699	0.06	0.06	0.059	0.0551118	0.1421	0.001	0.0634	0.0106	0.0757	0.14	0.0017	0.07	0.01	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.729307	NA	NA	NA	NA	NA	0.123	NA	4.8579
1166	5	16902512	16902512	A	T	intronic	MYO10	NA	NA	NA	ncRNA_exonic	ENSG00000243538	NA	NA	NA	Score=721;Name=lod=1136	NA	5p15.1	NA	NA	NA	NA	rs2560842	0.58	0.58	0.54	0.568291	0.4761	0.5605	0.6686	0.7398	0.3681	0.48	0.56	0.6	0.73	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.31813	NA	NA	NA	NA	NA	0.464	NA	4.8572333
1166	6	30229013	30229013	A	G	ncRNA_exonic	HLA-L	NA	NA	NA	ncRNA_exonic	ENSG00000243753	NA	NA	NA	NA	NA	6p22.1	Score=764;Name=V$TCF11MAFG_01	NA	NA	NA	rs2516707	0.34	0.34	0.301	0.397564	0.2465	0.5308	0.4496	0.3003	0.5102	0.22	0.48	0.41	0.3	0.3154	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.226547	NA	NA	0.247693	0.279947	NA	0.37	NA	4.8570736
1166	1	120286457	120286457	G	T	intronic	PHGDH	NA	NA	NA	intronic	ENSG00000092621	NA	NA	NA	NA	NA	1p12	NA	Name=CTCF	NA	NA	rs2236399	0.07	0.07	0.061	0.0856629	0.0626	0.0327	0.1787	0.0855	0.0982	0.05	0.04	0.15	0.09	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.263664	NA	NA	0.080362	0.079909	NA	0.08	NA	4.857038
1166	6	5973167	5973167	T	A	intergenic	FARS2,NRN1	dist=201351;dist=25066	NA	NA	ncRNA_exonic	ENSG00000215057	NA	NA	NA	Score=475;Name=lod=114	NA	6p25.1	NA	NA	NA	NA	rs9502385	0.09	0.09	0.084	0.0820687	0.1431	0.0169	0.1081	0.0832	0.0665	0.14	0.02	0.14	0.08	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.374749	NA	NA	NA	NA	NA	0.123	NA	4.8569
1166	6	31248655	31248655	G	T	intergenic	HLA-C,HLA-B	dist=8742;dist=72994	NA	NA	ncRNA_exonic	ENSG00000227939	NA	NA	NA	Score=849;Name=lod=3743	NA	6p21.33	NA	NA	NA	NA	rs17198692	0.15	0.15	0.127	0.16853	0.1431	0.0694	0.1974	0.2428	0.1759	0.13	0.1	0.2	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.643736	NA	NA	NA	NA	NA	0.116	NA	4.8569
1166	9	34133439	34133439	C	A	intergenic	DCAF12,UBAP1	dist=6668;dist=45564	NA	NA	ncRNA_exonic	ENSG00000239392	NA	NA	NA	Score=863;Name=lod=4276	NA	9p13.3	NA	NA	NA	NA	rs10971948	0.11	0.11	0.09	0.131989	0.1431	0.0665	0.1326	0.0469	0.3027	0.15	0.09	0.15	0.03	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.990448	NA	NA	NA	NA	NA	0.116	NA	4.8569
1166	12	48562850	48562850	C	T	intergenic	ASB8,C12orf68	dist=11473;dist=14516	NA	NA	ncRNA_exonic	ENSG00000257885	NA	NA	NA	Score=792;Name=lod=2210	NA	12q13.11	NA	NA	NA	NA	rs11168434	0.17	0.17	0.172	0.164736	0.1431	0.1409	0.1081	0.2526	0.1329	0.15	0.17	0.1	0.25	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.243861	NA	NA	NA	NA	NA	0.152	NA	4.8569
1166	11	47431529	47431529	G	A	intronic	SLC39A13	NA	NA	NA	intronic	ENSG00000165915	NA	NA	NA	NA	NA	11p11.2	NA	NA	Name=36	NA	rs753812	0.24	0.24	0.213	0.237021	0.1431	0.2956	0.2061	0.3578	0.1319	0.15	0.32	0.21	0.29	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.750356	NA	NA	NA	NA	NA	0.217	NA	4.8569
1166	4	152681952	152681952	A	G	intronic	PET112	NA	NA	NA	intronic	ENSG00000059691	NA	NA	NA	NA	NA	4q31.3	NA	Name=Pol2(b),KAP1,Pol2	Name=2	NA	rs1429559	0.41	0.41	0.423	0.445487	0.3777	0.3323	0.3098	0.5492	0.5879	0.36	0.37	0.31	0.59	0.4024	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.29171	NA	NA	0.363023	0.51793	NA	0.428	NA	4.856877
1166	12	85277608	85277608	C	T	exonic	SLC6A15	NA	synonymous SNV	SLC6A15:NM_018057:exon5:c.G786A:p.L262L	exonic	ENSG00000072041	NA	synonymous SNV	ENSG00000072041:ENST00000450363:exon5:c.G786A:p.L262L	NA	NA	12q21.31	NA	NA	NA	NA	rs17183612	0.15	0.15	0.141	0.110224	0.3042	0.002	0.2219	0.0076	0.0818	0.31	0.0017	0.23	0.01	0.2069	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.144932	NA	NA	0.298837	0.062188	NA	0.123	NA	4.8567296
1166	7	66532235	66532235	A	G	intronic	TYW1	NA	NA	NA	intronic	ENSG00000198874	NA	NA	NA	NA	NA	7q11.21	NA	Name=STAT3	Name=86	NA	rs2711910	0.31	0.31	0.271	0.370807	0.3837	0.13	0.4035	0.4894	0.4223	0.32	0.13	0.36	0.44	0.3829	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.092941	NA	NA	0.377093	0.420336	NA	0.406	NA	4.856307
1166	16	68725783	68725783	G	A	exonic	CDH3	NA	synonymous SNV	CDH3:NM_001793:exon13:c.G1956A:p.K652K	exonic	ENSG00000062038	NA	synonymous SNV	ENSG00000062038:ENST00000581171:exon12:c.G1791A:p.K597K,ENSG00000062038:ENST00000264012:exon13:c.G1956A:p.K652K,ENSG00000062038:ENST00000429102:exon13:c.G1956A:p.K652K	Score=317;Name=lod=26	NA	16q22.1	NA	NA	NA	NA	rs2274239	0.6	0.6	0.602	0.574481	0.6153	0.4732	0.5461	0.6452	0.5613	0.62	0.53	0.57	0.66	0.5786	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.566565	NA	NA	0.616628	0.64263	NA	0.659	NA	4.8561386
1166	8	22442661	22442661	A	G	exonic	PDLIM2	NA	synonymous SNV	PDLIM2:NM_176871:exon4:c.A447G:p.A149A,PDLIM2:NM_198042:exon4:c.A447G:p.A149A,PDLIM2:NM_021630:exon5:c.A1197G:p.A399A	exonic	ENSG00000120913	NA	synonymous SNV	ENSG00000120913:ENST00000265810:exon4:c.A447G:p.A149A,ENSG00000120913:ENST00000409141:exon4:c.A447G:p.A149A,ENSG00000120913:ENST00000409417:exon4:c.A447G:p.A149A,ENSG00000120913:ENST00000308354:exon5:c.A1197G:p.A399A,ENSG00000120913:ENST00000339162:exon5:c.A447G:p.A149A,ENSG00000120913:ENST00000397760:exon5:c.A447G:p.A149A,ENSG00000120913:ENST00000397761:exon5:c.A447G:p.A149A,ENSG00000120913:ENST00000426493:exon5:c.A447G:p.A149A,ENSG00000120913:ENST00000429812:exon5:c.A447G:p.A149A,ENSG00000120913:ENST00000436754:exon5:c.A447G:p.A149A,ENSG00000120913:ENST00000452226:exon5:c.A447G:p.A149A,ENSG00000120913:ENST00000456545:exon5:c.A447G:p.A149A	NA	NA	8p21.3	NA	Name=ZNF263	NA	NA	rs2294047	0.57	0.57	0.553	0.584065	0.6123	0.4673	0.6527	0.5915	0.6166	0.61	0.47	0.6	0.59	0.6013	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.646025	NA	NA	0.596977	0.597821	NA	0.558	NA	4.8560896
1166	2	222826638	222826638	G	T	intergenic	EPHA4,PAX3	dist=389628;dist=237968	NA	NA	ncRNA_exonic	ENSG00000226666	NA	NA	NA	Score=635;Name=lod=509	NA	2q36.1	NA	NA	NA	NA	rs28649254	0.2	0.2	0.203	0.18131	0.1441	0.2292	0.2219	0.2027	0.1125	0.14	0.24	0.21	0.23	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.345331	NA	NA	NA	NA	NA	0.123	NA	4.8559
1166	6	117650131	117650131	A	T	intronic	ROS1	NA	NA	NA	intronic	ENSG00000047936	NA	NA	NA	NA	NA	6q22.1	Score=905;Name=V$CEBPA_01	NA	NA	NA	rs574664	0.1	0.1	0.091	0.0866613	0.1441	0.1032	0.0994	0.0076	0.1084	0.15	0.11	0.09	0.01	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.820559	NA	NA	NA	NA	NA	0.123	NA	4.8559
1166	7	144344228	144344228	C	T	intronic	TPK1	NA	NA	NA	intronic	ENSG00000196511	NA	NA	NA	Score=346;Name=lod=34	NA	7q35	NA	NA	NA	NA	rs4726719	0.11	0.11	0.101	0.103235	0.1441	0.1151	0.1066	0.0582	0.1074	0.14	0.11	0.1	0.06	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.922883	2.922883	NA	NA	NA	NA	0.072	NA	4.8559
1166	9	117797394	117797394	G	A	intronic	TNC	NA	NA	NA	intronic	ENSG00000041982	NA	NA	NA	NA	NA	9q33.1	NA	NA	Name=87	NA	rs1330361	0.11	0.11	0.119	0.114816	0.1441	0.0089	0.1023	0.1762	0.1196	0.14	0.0035	0.11	0.2	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.890413	NA	NA	NA	NA	NA	0.116	NA	4.8559
1166	16	74702254	74702254	G	A	intergenic	RFWD3,MLKL	dist=1475;dist=3499	NA	NA	ncRNA_exonic	ENSG00000262904	NA	NA	NA	Score=539;Name=lod=207	NA	16q23.1	NA	NA	NA	NA	rs4448975	0.11	0.11	0.079	0.117412	0.1441	0.005	0.2925	0.0915	0.1166	0.15	0.0017	0.25	0.07	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.194707	NA	NA	NA	NA	NA	0.13	NA	4.8559
1166	21	24780100	24780100	G	C	intergenic	D21S2088E,LOC339622	dist=22944;dist=1432764	NA	NA	ncRNA_exonic	ENSG00000237569	NA	NA	NA	Score=788;Name=lod=2124	NA	21q21.2	NA	NA	NA	NA	rs1394366	0.23	0.23	0.247	0.240016	0.1441	0.2897	0.1398	0.3533	0.2055	0.15	0.29	0.14	0.34	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.257232	NA	NA	NA	NA	NA	0.326	NA	4.8559
1166	11	62560251	62560251	C	G	intronic	NXF1	NA	NA	NA	intronic	ENSG00000162231	NA	NA	NA	NA	NA	11q12.3	NA	NA	Name=6	NA	rs1815870	0.12	0.12	0.125	0.133786	0.0457	0.1558	0.0634	0.2368	0.1125	0.05	0.14	0.06	0.24	0.0987	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.108316	NA	NA	NA	NA	NA	0.065	NA	4.8556
1166	5	32087253	32087253	A	G	exonic	PDZD2	NA	synonymous SNV	PDZD2:NM_178140:exon19:c.A3699G:p.S1233S	exonic	ENSG00000133401	NA	synonymous SNV	ENSG00000133401:ENST00000282493:exon19:c.A3699G:p.S1233S,ENSG00000133401:ENST00000438447:exon20:c.A3699G:p.S1233S	NA	NA	5p13.3	NA	NA	NA	NA	rs157495	0.33	0.33	0.322	0.360423	0.2783	0.4137	0.2349	0.3411	0.5051	0.28	0.42	0.25	0.35	0.3017	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.180492	NA	NA	0.231163	0.337494	NA	0.239	NA	4.8555036
1166	1	163172574	163172574	G	C	intronic	RGS5	NA	NA	NA	ncRNA_intronic	ENSG00000232892	NA	NA	NA	NA	NA	1q23.3	NA	Name=Pol2	NA	NA	rs2292270	0.11	0.11	0.086	0.0928514	0.169	0.0397	0.1801	0.0605	0.0511	0.17	0.03	0.17	0.06	0.1427	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.920148	1.920148	NA	0.166163	0.06877	ID=COSM146672;OCCURENCE=1(stomach)	0.123	NA	4.8554703
1166	3	101295562	101295562	T	C	intronic	PCNP	NA	NA	NA	ncRNA_exonic	ENSG00000242299	NA	NA	NA	Score=642;Name=lod=540	NA	3q12.3	NA	NA	NA	NA	rs4683933	0.38	0.38	0.315	0.381989	0.4781	0.4127	0.4409	0.18	0.4826	0.49	0.41	0.41	0.17	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.707498	NA	NA	NA	NA	NA	0.348	NA	4.8552333
1167	2	210010180	210010180	C	T	intergenic	PTH2R,MAP2	dist=650949;dist=278591	NA	NA	ncRNA_exonic	ENSG00000232799	NA	NA	NA	Score=643;Name=lod=548	NA	2q34	NA	NA	NA	NA	rs113259590	0.08	0.08	0.063	0.0948482	0.1451	0.0258	0.1254	0.0772	0.1166	0.13	0.01	0.13	0.06	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.223733	NA	NA	NA	NA	NA	0.036	NA	4.8549
1167	2	222827492	222827492	T	C	intergenic	EPHA4,PAX3	dist=390482;dist=237114	NA	NA	ncRNA_exonic	ENSG00000226666	NA	NA	NA	Score=821;Name=lod=2888	NA	2q36.1	NA	NA	NA	NA	rs13424672	0.2	0.2	0.197	0.183307	0.1451	0.2312	0.2233	0.2065	0.1135	0.14	0.24	0.21	0.24	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.924863	NA	NA	NA	NA	NA	0.123	NA	4.8549
1167	10	99359739	99359739	T	C	intronic	HOGA1	NA	NA	NA	intronic	ENSG00000155252,ENSG00000241935,ENSG00000249967	NA	NA	NA	NA	Name=Metabolite levels	10q24.2	NA	NA	NA	NA	rs2297644	0.1	0.1	0.081	0.10024	0.1451	0.0327	0.0764	0.1346	0.0941	0.15	0.04	0.07	0.13	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.455653	NA	NA	NA	NA	ID=COSN163727;OCCURENCE=1(breast)	0.058	NA	4.8549
1167	15	78953464	78953464	G	A	intergenic	CHRNB4,LOC646938	dist=19877;dist=90915	NA	NA	ncRNA_exonic	ENSG00000213307	NA	NA	NA	Score=554;Name=lod=239	NA	15q25.1	NA	NA	NA	NA	rs12595350	0.18	0.18	0.148	0.217252	0.1451	0.2351	0.4251	0.0189	0.3937	0.15	0.24	0.35	0.04	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.224643	NA	NA	NA	NA	NA	0.145	NA	4.8549
1167	15	78953919	78953919	T	C	intergenic	CHRNB4,LOC646938	dist=20332;dist=90460	NA	NA	ncRNA_intronic	ENSG00000261303	NA	NA	NA	Score=567;Name=lod=268	NA	15q25.1	NA	NA	NA	NA	rs7164665	0.22	0.22	0.177	0.258387	0.1451	0.2341	0.4366	0.1694	0.3937	0.15	0.24	0.36	0.2	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.197609	NA	NA	NA	NA	NA	0.21	NA	4.8549
1167	2	216256344	216256344	C	G	intronic	FN1	NA	NA	NA	intronic	ENSG00000115414	NA	NA	NA	NA	NA	2q35	NA	Name=FOSL2	NA	NA	rs10498038	0.02	0.02	0.02	0.0177716	0.0507	NA	0.0187	0.0015	0.0235	0.05	NA	0.02	NA	0.0371	0.057	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.16446	NA	NA	0.057442	0.01044	NA	0.007	NA	4.854758
1167	11	6023581	6023581	A	G	exonic	OR56A4	NA	synonymous SNV	OR56A4:NM_001005179:exon1:c.T798C:p.L266L	exonic	ENSG00000183389	NA	synonymous SNV	ENSG00000183389:ENST00000330728:exon1:c.T798C:p.L266L	NA	NA	11p15.4	NA	NA	NA	NA	rs11040248	0.16	0.16	0.162	0.16234	0.2694	0.0794	0.1945	0.0582	0.2556	0.27	0.08	0.19	0.07	0.2443	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.316416	NA	NA	0.298301	0.107905	NA	0.094	NA	4.8546656
1167	17	4071245	4071245	C	T	intronic	ANKFY1	NA	NA	NA	intronic	ENSG00000167740,ENSG00000185722	NA	NA	NA	NA	NA	17p13.2	NA	NA	Name=5	NA	rs16953763	0.04	0.04	0.023	0.0239617	0.0547	NA	0.0389	0.0083	0.0276	0.07	NA	0.05	0.01	0.0427	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.514082	NA	NA	0.047994	0.01198	NA	0.087	NA	4.854606
1167	2	127953054	127953054	A	C	exonic	CYP27C1	NA	synonymous SNV	CYP27C1:NM_001001665:exon5:c.T576G:p.T192T	exonic	ENSG00000186684	NA	synonymous SNV	ENSG00000186684:ENST00000335247:exon5:c.T576G:p.T192T,ENSG00000186684:ENST00000409327:exon5:c.T576G:p.T192T	NA	NA	2q14.3	NA	NA	NA	NA	rs7568070	0.25	0.25	0.29	0.279353	0.2664	0.1141	0.1499	0.4644	0.3047	0.27	0.1	0.15	0.47	0.2697	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.024828	NA	NA	0.276047	0.437812	ID=COSM148938;OCCURENCE=1(stomach)	0.406	NA	4.8545196
1167	19	38847431	38847431	T	C	exonic	CATSPERG	NA	synonymous SNV	CATSPERG:NM_021185:exon11:c.T1245C:p.T415T	exonic	ENSG00000099338	NA	synonymous SNV	ENSG00000099338:ENST00000215069:exon9:c.T1224C:p.T408T,ENSG00000099338:ENST00000409235:exon11:c.T1245C:p.T415T,ENSG00000099338:ENST00000409410:exon11:c.T1245C:p.T415T	NA	NA	19q13.2	NA	NA	NA	NA	rs2286475	0.33	0.33	0.274	0.329073	0.2873	0.4544	0.3948	0.1573	0.4284	0.28	0.48	0.36	0.18	0.289	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.032772	NA	NA	0.23593	0.176804	NA	0.232	NA	4.8544366
1167	15	36871957	36871957	C	T	UTR5	C15orf41	NM_001130010:c.-105C>T	NA	NA	UTR5	ENSG00000186073	ENST00000566621:c.-105C>T,ENST00000564586:c.-105C>T	NA	NA	NA	NA	15q14	NA	Name=Pol2,TAF1,E2F6_(H-50),HEY1	NA	NA	rs3743337	0.48	0.48	0.487	0.477636	0.4791	0.4296	0.5576	0.4818	0.4632	0.47	0.44	0.57	0.48	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.022128	2.022128	NA	NA	NA	NA	0.5	NA	4.8542334
1167	9	97050005	97050005	A	G	intronic	ZNF169	NA	NA	NA	ncRNA_exonic	ENSG00000237679	NA	NA	NA	Score=596;Name=lod=353	NA	9q22.32	NA	NA	NA	NA	rs16912862	0.47	0.47	0.45	0.466254	0.4791	0.4097	0.5692	0.4228	0.4969	0.5	0.41	0.55	0.44	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.076764	NA	NA	NA	NA	NA	0.413	NA	4.8542333
1167	17	560604	560604	T	C	intronic	VPS53	NA	NA	NA	ncRNA_exonic	ENSG00000244097	NA	NA	NA	Score=803;Name=lod=2456	NA	17p13.3	NA	NA	NA	NA	rs2160955	0.27	0.27	0.265	0.28135	0.4791	0.1131	0.2781	0.0772	0.5297	0.49	0.13	0.28	0.1	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.586512	NA	NA	NA	NA	NA	0.297	NA	4.8542333
1167	1	172718106	172718106	A	G	intergenic	FASLG,TNFSF18	dist=82094;dist=292254	NA	NA	ncRNA_exonic	ENSG00000229785	NA	NA	NA	Score=598;Name=lod=360	NA	1q24.3	NA	NA	NA	NA	rs115457643	0.07	0.07	0.057	0.0776757	0.1461	0.0129	0.0937	0.0068	0.1585	0.13	0.02	0.12	0.01	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.769055	NA	NA	NA	NA	NA	0.072	NA	4.8539
1167	8	13562889	13562889	C	G	intergenic	C8orf48,SGCZ	dist=137092;dist=384484	NA	NA	ncRNA_exonic	ENSG00000255457	NA	NA	NA	Score=583;Name=lod=312	NA	8p22	NA	NA	NA	NA	rs73221654	0.08	0.08	0.074	0.0750799	0.1461	0.0357	0.0692	0.0582	0.0695	0.14	0.02	0.06	0.05	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.306706	NA	NA	NA	NA	NA	0.138	NA	4.8539
1167	9	134388562	134388562	C	T	intronic	POMT1	NA	NA	NA	intronic	ENSG00000130714	NA	NA	NA	NA	NA	9q34.13	NA	NA	Name=5	NA	rs77176471	0.08	0.08	0.073	0.0784744	0.1461	0.002	0.0793	0.1233	0.0266	0.14	0.0017	0.09	0.1	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.483626	NA	NA	NA	NA	NA	0.094	NA	4.8539
1167	11	86736768	86736768	G	A	intergenic	LOC100506368,TMEM135	dist=24779;dist=12118	NA	NA	ncRNA_exonic	ENSG00000254748	NA	NA	NA	Score=449;Name=lod=89	NA	11q14.2	NA	NA	NA	NA	rs11234914	0.16	0.16	0.154	0.157149	0.1461	0.1468	0.1182	0.1914	0.1605	0.15	0.15	0.13	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.538945	1.538945	NA	NA	NA	NA	0.109	NA	4.8539
1167	21	47420761	47420761	G	A	intronic	COL6A1	NA	NA	NA	intronic	ENSG00000142156	NA	NA	NA	NA	NA	21q22.3	NA	NA	Name=22	NA	rs7283989	0.58	0.58	0.566	0.559505	0.6004	0.7202	0.6383	0.3669	0.5562	0.6	0.72	0.61	0.36	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.151681	NA	NA	0.545883	0.401012	NA	0.072	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000079771.1;CLNDSDB=.;CLNDSDBID=.	4.853717
1167	11	62564009	62564009	T	C	exonic	NXF1	NA	synonymous SNV	NXF1:NM_006362:exon14:c.A1209G:p.R403R	exonic	ENSG00000162231	NA	synonymous SNV	ENSG00000162231:ENST00000294172:exon14:c.A1209G:p.R403R,ENSG00000162231:ENST00000530875:exon15:c.A1338G:p.R446R,ENSG00000162231:ENST00000532297:exon15:c.A1209G:p.R403R	Score=599;Name=lod=363	NA	11q12.3	NA	NA	NA	NA	rs4693	0.55	0.55	0.565	0.508187	0.6233	0.5496	0.4179	0.5348	0.3753	0.61	0.53	0.47	0.53	0.5507	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.451225	1.451225	NA	0.639102	0.550204	NA	0.514	NA	4.8535646
1167	10	95168715	95168715	C	T	intronic	MYOF	NA	NA	NA	intronic	ENSG00000138119	NA	NA	NA	NA	NA	10q23.33	NA	NA	Name=6	NA	rs12243458	0.07	0.07	0.071	0.058107	0.0507	0.001	0.0476	0.1475	0.0112	0.05	NA	0.06	0.17	0.046	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.410534	NA	NA	0.05	0.132965	NA	0.058	NA	4.8533
1167	8	145003777	145003777	G	A	intronic	PLEC	NA	NA	NA	intronic	ENSG00000178209	NA	NA	NA	NA	NA	8q24.3	NA	Name=TCF12	Name=19	NA	rs11136335	0.24	0.24	0.217	0.22524	0.4135	0.1369	0.2882	0.028	0.3446	0.41	0.15	0.29	0.03	0.3354	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.280684	NA	NA	0.397838	0.087943	NA	0.254	NA	4.853262
1167	2	132480986	132480986	C	T	intronic	C2orf27A	NA	NA	NA	ncRNA_exonic	ENSG00000213222	NA	NA	NA	Score=615;Name=lod=421	NA	2q21.1	NA	NA	NA	NA	rs62163367	0.3	0.3	0.264	0.272963	0.4801	0.131	0.3963	0.0825	0.3763	0.49	0.12	0.42	0.11	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.21313	NA	NA	NA	NA	NA	0.341	NA	4.8532333
1167	2	132481526	132481526	C	A	intronic	C2orf27A	NA	NA	NA	ncRNA_exonic	ENSG00000213222	NA	NA	NA	Score=605;Name=lod=383	NA	2q21.1	NA	NA	NA	NA	rs62163368	0.3	0.3	0.266	0.27516	0.4801	0.131	0.3991	0.0893	0.3763	0.49	0.12	0.43	0.12	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.905418	NA	NA	NA	NA	NA	0.261	NA	4.8532333
1167	2	132481529	132481529	C	T	intronic	C2orf27A	NA	NA	NA	ncRNA_exonic	ENSG00000213222	NA	NA	NA	Score=605;Name=lod=383	NA	2q21.1	NA	NA	NA	NA	rs62163369	0.3	0.3	0.264	0.27516	0.4801	0.131	0.3991	0.0893	0.3763	0.49	0.12	0.43	0.12	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.841224	NA	NA	NA	NA	NA	0.261	NA	4.8532333
1167	6	32123639	32123639	G	A	ncRNA_intronic	PPT2-EGFL8	NA	NA	NA	intronic	ENSG00000221988,ENSG00000258388	NA	NA	NA	Score=497;Name=lod=139	NA	6p21.32	NA	NA	NA	NA	rs2269425	0.18	0.18	0.166	0.144968	0.1769	0.1706	0.2147	0.0923	0.1074	0.19	0.19	0.23	0.1	0.155	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.297728	3.297728	NA	0.14821	0.105228	NA	0.087	NA	4.8532233
1167	6	151243467	151243467	G	A	intronic	MTHFD1L	NA	NA	NA	intronic	ENSG00000120254	NA	NA	NA	NA	NA	6q25.1	NA	NA	Name=13	NA	rs9478857	0.06	0.06	0.069	0.0904553	0.0408	0.0347	0.0519	0.177	0.1094	0.04	0.04	0.04	0.14	0.0646	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.93092	NA	NA	0.041512	0.160009	NA	0.072	NA	4.853088
1167	2	219706694	219706694	C	T	intergenic	PRKAG3,WNT6	dist=10182;dist=17852	NA	NA	ncRNA_exonic	ENSG00000232625	NA	NA	NA	Score=725;Name=lod=1174	NA	2q35	NA	NA	NA	NA	rs691574	0.2	0.2	0.182	0.179513	0.1471	0.4018	0.1758	0.0514	0.1595	0.16	0.4	0.15	0.09	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.538493	1.538493	NA	NA	NA	NA	0.138	NA	4.8529
1167	11	17452603	17452603	T	G	intronic	ABCC8	NA	NA	NA	intronic	ENSG00000006071	NA	NA	NA	NA	NA	11p15.1	NA	Name=NRSF	NA	NA	rs8192694	0.09	0.09	0.087	0.096246	0.1471	0.0516	0.1268	0.0204	0.1708	0.14	0.05	0.13	0.03	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.337355	NA	NA	NA	NA	NA	0.058	NA	4.8529
1167	12	96384031	96384031	C	T	intronic	HAL	NA	NA	NA	intronic	ENSG00000084110	NA	NA	NA	NA	NA	12q23.1	NA	NA	Name=2	NA	rs10745747	0.16	0.16	0.157	0.150359	0.1471	0.0873	0.1095	0.2678	0.089	0.16	0.09	0.12	0.25	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.689976	NA	NA	NA	NA	NA	0.181	NA	4.8529
1167	15	48797424	48797424	C	A	intronic	FBN1	NA	NA	NA	intronic	ENSG00000166147	NA	NA	NA	NA	NA	15q21.1	NA	Name=MafK_(SC-477),MafK_(ab50322)	NA	NA	rs8037304	0.27	0.27	0.276	0.270767	0.1471	0.3522	0.1945	0.4319	0.1503	0.14	0.38	0.17	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.321537	NA	NA	NA	NA	NA	0.232	NA	4.8529
1167	15	48813107	48813107	G	T	intronic	FBN1	NA	NA	NA	intronic	ENSG00000166147	NA	NA	NA	NA	NA	15q21.1	NA	NA	Name=20	NA	rs2413907	0.2	0.2	0.165	0.185703	0.1471	0.3522	0.1772	0.1188	0.1503	0.14	0.38	0.15	0.1	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.0657	NA	NA	NA	NA	NA	0.123	NA	4.8529
1167	7	39472708	39472708	A	G	exonic	POU6F2	NA	synonymous SNV	POU6F2:NM_001166018:exon8:c.A1059G:p.P353P,POU6F2:NM_007252:exon8:c.A1059G:p.P353P	exonic	ENSG00000106536	NA	synonymous SNV	ENSG00000106536:ENST00000416452:exon2:c.A156G:p.P52P,ENSG00000106536:ENST00000559001:exon5:c.A894G:p.P298P,ENSG00000106536:ENST00000524147:exon6:c.A894G:p.P298P,ENSG00000106536:ENST00000518318:exon7:c.A1059G:p.P353P,ENSG00000106536:ENST00000520104:exon7:c.A1035G:p.P345P,ENSG00000106536:ENST00000403058:exon8:c.A1059G:p.P353P	NA	NA	7p14.1	NA	NA	NA	NA	rs2302123	0.39	0.39	0.378	0.40615	0.2425	0.5833	0.2795	0.5416	0.2986	0.24	0.59	0.26	0.49	0.3157	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.448751	NA	NA	0.255814	0.524739	NA	0.326	NA	4.8526526
1167	18	61154351	61154351	T	C	intronic	SERPINB5	NA	NA	NA	intronic	ENSG00000206075	NA	NA	NA	NA	NA	18q21.33	NA	NA	Name=5	NA	rs2271253	0.12	0.12	0.136	0.175719	0.0408	0.0734	0.0836	0.3517	0.2474	0.03	0.08	0.08	0.34	0.0819	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.853328	NA	NA	0.025233	0.283606	NA	0.181	NA	4.852067
1167	5	137708434	137708434	C	T	exonic	KDM3B	NA	synonymous SNV	KDM3B:NM_016604:exon2:c.C264T:p.I88I	exonic	ENSG00000120733	NA	synonymous SNV	ENSG00000120733:ENST00000510866:exon1:c.C72T:p.I24I,ENSG00000120733:ENST00000314358:exon2:c.C264T:p.I88I	Score=649;Name=lod=577	NA	5q31.2	NA	NA	NA	NA	rs4835678	0.66	0.66	0.654	0.67492	0.5934	0.8482	0.6715	0.5598	0.7382	0.59	0.87	0.62	0.54	0.6376	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.361496	1.361496	NA	0.583605	0.574217	NA	0.623	NA	4.8520616
1167	4	109710641	109710641	C	T	intergenic	AGXT2L1,COL25A1	dist=26406;dist=21236	NA	NA	ncRNA_exonic	ENSG00000250185	NA	NA	NA	Score=787;Name=lod=2097	NA	4q25	NA	NA	NA	NA	rs55686473	0.07	0.07	0.051	0.0505192	0.1481	NA	0.0591	0.0083	0.0532	0.15	NA	0.07	0.01	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.669164	NA	NA	NA	NA	NA	0.101	NA	4.8519
1167	12	21695584	21695584	A	G	intronic	GYS2	NA	NA	NA	intronic	ENSG00000111713	NA	NA	NA	NA	NA	12p12.1	NA	NA	Name=4	NA	rs3741841	0.19	0.19	0.18	0.209265	0.1481	0.2004	0.1427	0.3253	0.1718	0.13	0.18	0.15	0.3	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.184885	NA	NA	NA	NA	NA	0.304	NA	4.8519
1167	14	95100748	95100748	G	A	intergenic	SERPINA3,SERPINA13P	dist=10358;dist=6314	NA	NA	ncRNA_exonic	ENSG00000258805	NA	NA	NA	Score=622;Name=lod=450	NA	14q32.13	NA	NA	NA	NA	rs79693607	0.11	0.11	NA	0.121805	0.1481	0.1448	0.0692	0.0401	0.2188	0.15	0.13	0.07	0.06	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.040831	NA	NA	NA	NA	NA	0.065	NA	4.8519
1167	12	125438523	125438523	C	T	exonic	DHX37	NA	synonymous SNV	DHX37:NM_032656:exon20:c.G2598A:p.E866E	exonic	ENSG00000150990	NA	synonymous SNV	ENSG00000150990:ENST00000544745:exon17:c.G1959A:p.E653E,ENSG00000150990:ENST00000308736:exon20:c.G2598A:p.E866E	Score=497;Name=lod=140	NA	12q24.31	NA	NA	NA	NA	rs4258464	0.63	0.63	0.552	0.65635	0.5984	0.8462	0.6571	0.4463	0.8037	0.58	0.84	0.64	0.43	0.6338	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.916751	NA	NA	0.582791	0.4396	ID=COSM203006;OCCURENCE=1(large_intestine)	0.5	NA	4.8516756
1167	5	57754005	57754005	G	A	intronic	PLK2	NA	NA	NA	intronic	ENSG00000145632	NA	NA	NA	NA	NA	5q11.2	Score=912;Name=V$FOXJ2_01	NA	Name=105	NA	rs1848510	0.4	0.4	0.405	0.403155	0.3787	0.5139	0.4625	0.2602	0.4652	0.37	0.56	0.41	0.26	0.4005	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.398781	NA	NA	0.369156	0.28061	NA	0.406	NA	4.851644
1167	3	13978803	13978803	A	G	upstream;downstream	TPRXL;FGD5P1	NA	NA	NA	ncRNA_exonic	ENSG00000250439	NA	NA	NA	Score=596;Name=lod=351	NA	3p25.1	NA	NA	NA	NA	rs6776709	0.34	0.34	0.302	0.372204	0.3151	0.4276	0.3746	0.2935	0.4785	0.32	0.39	0.36	0.31	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.306542	NA	NA	NA	NA	NA	NA	NA	4.8515666
1167	6	162990595	162990595	T	C	intronic	PARK2	NA	NA	NA	ncRNA_exonic	ENSG00000227913	NA	NA	NA	Score=295;Name=lod=21	NA	6q26	NA	NA	NA	NA	rs10945848	0.57	0.57	0.537	0.577276	0.4821	0.7143	0.5389	0.5446	0.6053	0.47	0.74	0.54	0.54	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.486855	NA	NA	NA	NA	NA	0.609	NA	4.8512333
1167	16	10205691	10205691	G	C	intronic	GRIN2A	NA	NA	NA	ncRNA_exonic	ENSG00000261647	NA	NA	NA	Score=809;Name=lod=2586	NA	16p13.2	NA	NA	NA	NA	rs34393853	0.47	0.47	0.492	0.474441	0.4821	0.4911	0.3919	0.5023	0.4703	0.48	0.49	0.4	0.48	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.318768	NA	NA	NA	NA	NA	0.406	NA	4.8512333
1167	1	205042939	205042939	C	T	UTR3	CNTN2	NM_005076:c.*46C>T	NA	NA	UTR3	ENSG00000184144	ENST00000331830:c.*46C>T	NA	NA	NA	NA	1q32.1	NA	Name=Pol2	NA	NA	rs17416088	0.14	0.14	0.137	0.165136	0.166	0.0069	0.0994	0.2837	0.2137	0.16	0.0035	0.14	0.25	0.1642	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.148417	NA	NA	0.152093	0.257376	NA	0.08	NA	4.8510404
1167	1	111957245	111957245	G	A	exonic	OVGP1	NA	synonymous SNV	OVGP1:NM_002557:exon11:c.C1878T:p.P626P	exonic	ENSG00000085465	NA	synonymous SNV	ENSG00000085465:ENST00000369732:exon11:c.C1878T:p.P626P	NA	NA	1p13.2	NA	NA	NA	NA	rs9629	0.2	0.2	0.195	0.191693	0.2724	0.1885	0.1945	0.115	0.2137	0.27	0.2	0.22	0.1	0.2556	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.076652	NA	NA	0.287674	0.14276	NA	0.203	NA	4.8509926
1167	16	15694484	15694484	G	A	intronic	KIAA0430	NA	NA	NA	intronic	ENSG00000166780,ENSG00000166783	NA	NA	NA	NA	NA	16p13.11	Score=875;Name=V$MAZR_01	NA	NA	NA	rs79236569	0.02	0.02	0.018	0.028155	0.0427	NA	0.0259	0.0053	0.0746	0.04	NA	0.03	0.01	0.0474	0.059	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.060967	NA	NA	0.058909	0.010477	NA	0.029	NA	4.850991
1167	9	97260370	97260370	T	C	intergenic	HIATL1,FBP2	dist=37168;dist=60633	NA	NA	ncRNA_exonic	ENSG00000224245	NA	NA	NA	Score=527;Name=lod=184	NA	9q22.32	NA	NA	NA	NA	rs7868600	0.19	0.19	0.186	0.215655	0.1491	0.0675	0.1398	0.3949	0.2485	0.14	0.09	0.17	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.771426	NA	NA	NA	NA	NA	0.174	NA	4.8509
1167	9	124282253	124282253	C	G	intergenic	GGTA1P,DAB2IP	dist=19947;dist=47146	NA	NA	ncRNA_exonic	ENSG00000213467	NA	NA	NA	Score=740;Name=lod=1361	NA	9q33.2	NA	NA	NA	NA	rs60635873	0.16	0.16	0.154	0.153554	0.1491	0.2113	0.1052	0.2103	0.0562	0.14	0.19	0.13	0.17	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.722918	NA	NA	NA	NA	NA	0.145	NA	4.8509
1167	9	138683790	138683790	T	C	intronic	KCNT1	NA	NA	NA	intronic	ENSG00000107147	NA	NA	NA	NA	NA	9q34.3	NA	NA	Name=3	NA	rs41306389	0.08	0.08	0.088	0.109425	0.1491	0.002	0.0908	0.0855	0.2249	0.15	NA	0.1	0.07	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.568273	NA	NA	NA	NA	NA	0.152	NA	4.8509
1167	11	7439447	7439447	C	T	intronic	SYT9	NA	NA	NA	intronic	ENSG00000170743	NA	NA	NA	NA	NA	11p15.4	NA	NA	Name=16	NA	rs12364093	0.17	0.17	0.146	0.172324	0.1491	0.2917	0.1254	0.1619	0.1207	0.14	0.28	0.12	0.14	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.146246	NA	NA	NA	NA	NA	0.116	NA	4.8509
1167	12	96104461	96104461	G	A	intronic	NTN4	NA	NA	NA	intronic	ENSG00000074527	NA	NA	NA	NA	NA	12q22	NA	NA	Name=6	NA	rs2431012	0.07	0.07	0.062	0.053115	0.1491	NA	0.0836	0.0038	0.0542	0.15	NA	0.11	0.01	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.045008	NA	NA	NA	NA	NA	0.159	NA	4.8509
1167	17	20805497	20805497	T	G	intergenic	CCDC144NL,USP22	dist=6044;dist=97409	NA	NA	ncRNA_exonic	ENSG00000265790	NA	NA	NA	Score=622;Name=lod=448	NA	17p11.2	NA	NA	NA	NA	rs16962515	0.12	0.12	0.095	0.0952476	0.1491	0.1786	0.085	0.0068	0.0808	0.14	0.21	0.09	0.01	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.633608	NA	NA	NA	NA	NA	0.109	NA	4.8509
1167	17	30330286	30330286	G	A	intergenic	SUZ12,LRRC37B	dist=2229;dist=17869	NA	NA	ncRNA_exonic	ENSG00000264300	NA	NA	NA	Score=600;Name=lod=367	NA	17q11.2	NA	NA	NA	NA	rs72825736	0.08	0.08	0.073	0.08127	0.1491	NA	0.0821	0.0356	0.1564	0.15	0.0035	0.08	0.04	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.935986	NA	NA	NA	NA	NA	0.159	NA	4.8509
1167	1	86913265	86913265	C	T	exonic	CLCA2	NA	synonymous SNV	CLCA2:NM_006536:exon11:c.C1788T:p.R596R	exonic	ENSG00000137975	NA	synonymous SNV	ENSG00000137975:ENST00000370565:exon11:c.C1788T:p.R596R	NA	NA	1p22.3	NA	NA	NA	NA	rs2275001	0.26	0.26	0.236	0.254593	0.2634	0.3889	0.2032	0.0908	0.365	0.27	0.39	0.23	0.12	0.279	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.340496	NA	NA	0.273488	0.131866	NA	0.188	NA	4.8507786
1167	2	128253571	128253571	C	T	intronic	IWS1	NA	NA	NA	ncRNA_intronic	ENSG00000231731	NA	NA	NA	Score=520;Name=lod=173	NA	2q14.3	NA	NA	NA	NA	rs334151	0.08	0.08	0.074	0.0642971	0.168	0.001	0.0865	0.0174	0.0706	0.16	0.0017	0.09	0.03	0.1354	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.660893	1.660893	NA	0.179302	0.0463	NA	0.174	NA	4.8506313
1167	7	76610095	76610095	C	T	upstream	DTX2P1-UPK3BP1-PMS2P11	NA	NA	NA	ncRNA_exonic	ENSG00000186704	NA	NA	NA	Score=529;Name=lod=188	NA	7q11.23	NA	NA	NA	NA	rs62473742	0.2	0.2	0.133	0.182308	0.3161	0.1319	0.2579	0.0446	0.229	0.31	0.12	0.28	0.06	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.534714	NA	NA	NA	NA	NA	NA	NA	4.8505666
1167	17	63189817	63189817	G	A	intronic	RGS9	NA	NA	NA	intronic	ENSG00000108370	NA	NA	NA	NA	NA	17q24.1	NA	NA	Name=31	NA	rs2056050	0.13	0.13	0.088	0.154952	0.0239	0.3403	0.2839	0.0023	0.2137	0.03	0.33	0.22	0.0041	0.1032	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.050795	NA	NA	0.022577	0.010198	NA	0.072	NA	4.850323
1167	9	20532878	20532878	C	G	intronic	MLLT3	NA	NA	NA	ncRNA_exonic	ENSG00000237088	NA	NA	NA	Score=785;Name=lod=2069	NA	9p21.3	NA	NA	NA	NA	rs10757136	0.58	0.58	0.564	0.561302	0.4831	0.6706	0.5634	0.5378	0.5593	0.48	0.71	0.57	0.59	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.009022	NA	NA	NA	NA	NA	0.551	NA	4.8502333
1167	17	15607777	15607777	A	G	intronic	ZNF286A	NA	NA	NA	ncRNA_exonic	ENSG00000233966	NA	NA	NA	Score=727;Name=lod=1203	NA	17p12	NA	NA	NA	NA	rs62071718	0.38	0.38	0.375	0.399561	0.4831	0.4762	0.4164	0.3026	0.3538	0.46	0.42	0.38	0.23	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.250512	NA	NA	NA	NA	NA	0.08	NA	4.8502333
1167	1	161136843	161136843	C	G	intronic	PPOX	NA	NA	NA	intronic	ENSG00000143224	NA	NA	NA	NA	NA	1q23.3	NA	Name=E2F6_(H-50),E2F6,ZNF263,ZBTB7A_(SC-34508),TBP	Name=6	NA	rs2301287	0.38	0.38	0.34	0.353435	0.4006	0.4474	0.3761	0.2315	0.3569	0.4	0.47	0.37	0.24	0.3717	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.22967	NA	NA	0.377558	0.272129	NA	0.355	NA	4.850142
1167	1	26609259	26609259	C	T	exonic	UBXN11	NA	synonymous SNV	UBXN11:NM_001077262:exon10:c.G813A:p.T271T,UBXN11:NM_145345:exon14:c.G1074A:p.T358T,UBXN11:NM_183008:exon15:c.G1173A:p.T391T	exonic	ENSG00000158062	NA	synonymous SNV	ENSG00000158062:ENST00000314675:exon10:c.G813A:p.T271T,ENSG00000158062:ENST00000374223:exon11:c.G444A:p.T148T,ENSG00000158062:ENST00000357089:exon13:c.G1074A:p.T358T,ENSG00000158062:ENST00000374217:exon14:c.G1074A:p.T358T,ENSG00000158062:ENST00000374221:exon15:c.G1173A:p.T391T,ENSG00000158062:ENST00000374222:exon15:c.G1173A:p.T391T	NA	NA	1p36.11	NA	Name=Egr-1	NA	NA	rs7522905	0.45	0.45	0.466	0.384585	0.6282	0.3095	0.3948	0.3245	0.2853	0.63	0.3	0.42	0.38	0.5273	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.409156	NA	NA	0.661203	0.421053	NA	0.478	NA	4.8499636
1167	6	32629802	32629802	A	G	exonic	HLA-DQB1	NA	synonymous SNV	HLA-DQB1:NM_001243961:exon3:c.T603C:p.D201D,HLA-DQB1:NM_002123:exon3:c.T603C:p.D201D	exonic	ENSG00000179344	NA	synonymous SNV	ENSG00000179344:ENST00000399082:exon2:c.T333C:p.D111D,ENSG00000179344:ENST00000374943:exon3:c.T603C:p.D201D,ENSG00000179344:ENST00000399079:exon3:c.T603C:p.D201D,ENSG00000179344:ENST00000434651:exon3:c.T603C:p.D201D,ENSG00000179344:ENST00000399084:exon4:c.T603C:p.D201D	NA	NA	6p21.32	NA	Name=Pol2-4H8	NA	NA	rs1049092	0.61	0.61	0.602	0.620208	0.5994	0.6756	0.7176	0.4977	0.681	0.59	0.72	0.7	0.45	0.6212	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.14947	NA	NA	0.596163	0.509083	NA	0.036	NA	4.8499036
1167	5	7883188	7883188	G	A	intronic	MTRR	NA	NA	NA	intronic	ENSG00000124275	NA	NA	NA	NA	NA	5p15.31	NA	NA	Name=6	NA	rs162035	0.23	0.23	0.22	0.251198	0.1501	0.1399	0.3646	0.4327	0.1442	0.14	0.15	0.31	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.988545	NA	NA	NA	NA	NA	0.326	NA	4.8499
1167	11	7439418	7439418	A	G	intronic	SYT9	NA	NA	NA	intronic	ENSG00000170743	NA	NA	NA	NA	NA	11p15.4	NA	NA	Name=16	NA	rs12365591	0.17	0.17	0.146	0.172724	0.1501	0.2927	0.1254	0.1619	0.1207	0.14	0.28	0.12	0.14	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.399874	NA	NA	NA	NA	NA	0.116	NA	4.8499
1167	13	90013792	90013792	A	T	intergenic	LINC00433,LINC00353	dist=816028;dist=187256	NA	NA	ncRNA_exonic	ENSG00000225530	NA	NA	NA	Score=755;Name=lod=1562	NA	13q31.3	NA	NA	NA	NA	rs72630577	0.07	0.07	0.058	0.0537141	0.1501	0.002	0.0576	0.0045	0.0716	0.16	0.0035	0.08	NA	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.167678	NA	NA	NA	NA	NA	0.123	NA	4.8499
1167	13	90013841	90013841	G	C	intergenic	LINC00433,LINC00353	dist=816077;dist=187207	NA	NA	ncRNA_exonic	ENSG00000225530	NA	NA	NA	Score=755;Name=lod=1562	NA	13q31.3	NA	NA	NA	NA	rs72630579	0.07	0.07	0.06	0.0537141	0.1501	0.002	0.0576	0.0045	0.0716	0.16	0.0035	0.08	NA	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.204016	NA	NA	NA	NA	NA	0.123	NA	4.8499
1167	17	20805343	20805343	T	C	intergenic	CCDC144NL,USP22	dist=5890;dist=97563	NA	NA	ncRNA_exonic	ENSG00000265790	NA	NA	NA	Score=622;Name=lod=448	NA	17p11.2	NA	NA	NA	NA	rs150455797	0.12	0.12	0.088	0.0978435	0.1501	0.1796	0.0865	0.0144	0.0808	0.14	0.21	0.09	0.02	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.155603	NA	NA	NA	NA	NA	0.101	NA	4.8499
1167	6	29797639	29797639	C	T	exonic	HLA-G	NA	synonymous SNV	HLA-G:NM_002127:exon6:c.C942T:p.G314G	exonic	ENSG00000204632	NA	synonymous SNV	ENSG00000204632:ENST00000376815:exon3:c.C390T:p.G130G,ENSG00000204632:ENST00000376818:exon4:c.C666T:p.G222G,ENSG00000204632:ENST00000478519:exon4:c.C666T:p.G222G,ENSG00000204632:ENST00000360323:exon5:c.C942T:p.G314G,ENSG00000204632:ENST00000376828:exon6:c.C957T:p.G319G,ENSG00000204632:ENST00000428701:exon6:c.C942T:p.G314G	NA	NA	6p22.1	NA	NA	NA	NA	rs1049033	0.23	0.23	0.227	0.231829	0.2555	0.1091	0.245	0.2504	0.2996	0.26	0.14	0.22	0.29	0.2662	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.577027	NA	NA	0.295465	0.268271	NA	0.254	NA	4.8495016
1167	12	124144395	124144395	A	G	exonic	GTF2H3	NA	synonymous SNV	GTF2H3:NM_001271866:exon9:c.A609G:p.P203P,GTF2H3:NM_001271867:exon10:c.A615G:p.P205P,GTF2H3:NM_001271868:exon10:c.A300G:p.P100P,GTF2H3:NM_001516:exon11:c.A738G:p.P246P	exonic	ENSG00000111358	NA	nonsynonymous SNV	ENSG00000111358:ENST00000543415:exon10:c.A592G:p.S198G	NA	NA	12q24.31	NA	NA	NA	NA	rs1051793	0.34	0.34	0.345	0.351038	0.3817	0.0615	0.304	0.6135	0.2965	0.39	0.06	0.32	0.63	0.3648	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.798678	2.798678	NA	0.404535	0.589877	NA	0.312	NA	4.848965
1167	1	110207482	110207482	C	T	intronic	GSTM4	NA	NA	NA	intronic	ENSG00000168765	NA	NA	NA	NA	NA	1p13.3	NA	NA	Name=3	NA	rs670439	0.1	0.1	0.106	0.0834665	0.1511	0.001	0.0764	0.1256	0.047	0.16	NA	0.08	0.15	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.666038	NA	NA	NA	NA	NA	0.087	NA	4.8489
1167	4	189028010	189028010	G	A	intergenic	TRIML2,TRIML1	dist=1602;dist=32588	NA	NA	ncRNA_exonic	ENSG00000241011	NA	NA	NA	Score=510;Name=lod=157	NA	4q35.2	NA	NA	NA	NA	rs62352742	0.18	0.18	0.154	0.177716	0.1511	0.1815	0.2205	0.2277	0.1033	0.14	0.2	0.2	0.2	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.440041	NA	NA	NA	NA	NA	0.167	NA	4.8489
1167	8	106207406	106207406	C	G	intergenic	LRP12,ZFPM2	dist=606154;dist=123741	NA	NA	ncRNA_exonic	ENSG00000253318	NA	NA	NA	Score=688;Name=lod=832	NA	8q23.1	NA	NA	NA	NA	rs1460580	0.16	0.16	0.149	0.136182	0.1511	0.2837	0.1037	0.0348	0.1288	0.16	0.28	0.14	0.05	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.168312	NA	NA	NA	NA	NA	0.094	NA	4.8489
1167	9	97177641	97177641	A	G	intronic	HIATL1	NA	NA	NA	intronic	ENSG00000148110	NA	NA	NA	NA	NA	9q22.32	NA	NA	Name=4	NA	rs12338572	0.17	0.17	0.139	0.182308	0.1511	0.0506	0.1412	0.292	0.2311	0.14	0.07	0.17	0.3	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.332499	1.332499	NA	NA	NA	NA	0.065	NA	4.8489
1167	9	97195313	97195313	T	C	intronic	HIATL1	NA	NA	NA	intronic	ENSG00000148110	NA	NA	NA	Score=374;Name=lod=44	NA	9q22.32	NA	NA	NA	NA	rs10993194	0.16	0.16	0.163	0.182508	0.1511	0.0506	0.1412	0.2927	0.2311	0.15	0.07	0.16	0.3	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.447561	NA	NA	NA	NA	NA	0.13	NA	4.8489
1167	15	78188471	78188471	G	T	intergenic	LOC253044,LOC645752	dist=246890;dist=18088	NA	NA	ncRNA_exonic	ENSG00000260139	NA	NA	NA	Score=429;Name=lod=74	NA	15q24.3	NA	NA	NA	NA	rs7162616	0.1	0.1	0.1	0.0836661	0.1511	0.0556	0.0821	0.0552	0.0828	0.15	0.07	0.09	0.07	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.12963	NA	0.02	NA	NA	NA	0.109	NA	4.8489
1167	16	66599710	66599710	G	A	intronic	CKLF,CKLF-CMTM1	NA	NA	NA	intronic	ENSG00000217555,ENSG00000254788	NA	NA	NA	NA	NA	16q21	NA	NA	Name=2	NA	rs2232727	0.07	0.07	0.058	0.0515176	0.1511	NA	0.0778	0.0098	0.0399	0.15	NA	0.08	0.01	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.959946	NA	NA	NA	NA	NA	0.029	NA	4.8489
1167	14	100613093	100613093	C	T	UTR3	DEGS2	NM_206918:c.*5G>A	NA	NA	UTR3	ENSG00000168350	ENST00000305631:c.*5G>A,ENST00000553834:c.*69G>A	NA	NA	NA	NA	14q32.2	NA	Name=CTCF,CTCF_(C-20),Pol2-4H8	NA	NA	rs2236317	0.14	0.14	0.117	0.138978	0.17	0.1776	0.1628	0.0643	0.1513	0.17	0.16	0.16	0.06	0.1539	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.633586	NA	NA	0.160814	0.079664	NA	0.058	NA	4.8486194
1167	11	60900018	60900018	G	T	intronic	VPS37C	NA	NA	NA	intronic	ENSG00000167987	NA	NA	NA	Score=547;Name=lod=223	NA	11q12.2	NA	NA	NA	NA	rs72914704	0.03	0.03	0.026	0.0217652	0.0606	NA	0.0504	0.0038	0.0082	0.05	NA	0.05	0.0041	0.0366	0.054	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.286073	NA	NA	0.054239	0.012996	NA	0.022	NA	4.848561
1167	15	78202253	78202253	C	T	intergenic	LOC253044,LOC645752	dist=260672;dist=4306	NA	NA	intergenic	ENSG00000260139,ENSG00000260776	dist=5237;dist=4306	NA	NA	Score=571;Name=lod=279	NA	15q24.3	Score=685;Name=V$P53_01	NA	NA	NA	rs12916202	0.26	0.26	0.163	0.276757	0.4851	0.1597	0.2781	0.2224	0.2556	0.39	0.15	0.27	0.2	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.754687	NA	NA	NA	NA	NA	0.275	NA	4.8482334
1167	8	37635649	37635649	A	G	UTR3	PROSC	NM_007198:c.*27A>G	NA	NA	UTR3	ENSG00000147471	ENST00000328195:c.*27A>G	NA	NA	NA	NA	8p11.23	NA	Name=USF1_(SC-8983)	NA	NA	rs7463174	0.2	0.2	0.17	0.202875	0.1402	0.3065	0.2378	0.084	0.2965	0.15	0.34	0.19	0.12	0.1895	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.765389	1.765389	NA	0.155465	0.107127	NA	0.159	NA	4.8481684
1167	5	179135955	179135955	T	G	intronic	CANX	NA	NA	NA	intronic	ENSG00000127022	NA	NA	NA	NA	NA	5q35.3	NA	NA	Name=4	NA	rs111374658	0.02	0.02	0.021	0.0179712	0.0586	NA	0.0187	0.0038	0.0133	0.05	NA	0.02	0.002	0.0414	0.052	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.453315	1.453315	NA	0.05186	0.009079	NA	0.022	NA	4.84814
1167	7	45856902	45856902	T	C	intergenic	SEPT7P2,IGFBP1	dist=48285;dist=71057	NA	NA	ncRNA_exonic	ENSG00000235955	NA	NA	NA	Score=662;Name=lod=652	NA	7p12.3	NA	NA	NA	NA	rs34273038	0.16	0.16	0.12	0.177716	0.1521	0.1181	0.1081	0.3835	0.0368	0.14	0.1	0.12	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.382477	NA	NA	NA	NA	NA	NA	NA	4.8479
1167	10	87898839	87898839	G	A	intronic	GRID1	NA	NA	NA	intronic	ENSG00000182771	NA	NA	NA	NA	NA	10q23.1	NA	Name=CTCF	NA	NA	rs34013482	0.15	0.15	0.159	0.182308	0.1521	0.0893	0.1715	0.264	0.2065	0.14	0.07	0.2	0.24	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.021983	NA	NA	NA	NA	NA	0.21	NA	4.8479
1167	16	56721773	56721773	A	T	intergenic	MT1X,NUP93	dist=3665;dist=42244	NA	NA	ncRNA_exonic	ENSG00000261429	NA	NA	NA	NA	NA	16q13	NA	Name=Pol2	NA	NA	rs74024338	0.14	0.14	0.152	0.147963	0.1521	0.0813	0.147	0.2216	0.1135	0.15	0.07	0.16	0.2	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.146447	NA	NA	NA	NA	NA	0.152	NA	4.8479
1167	18	8825192	8825192	A	G	exonic	SOGA2	NA	synonymous SNV	SOGA2:NM_015210:exon15:c.A3684G:p.G1228G	exonic	ENSG00000168502	NA	synonymous SNV	ENSG00000168502:ENST00000518815:exon9:c.A1659G:p.G553G,ENSG00000168502:ENST00000306329:exon13:c.A4641G:p.G1547G,ENSG00000168502:ENST00000517570:exon13:c.A3561G:p.G1187G,ENSG00000168502:ENST00000400050:exon14:c.A3561G:p.G1187G,ENSG00000168502:ENST00000359865:exon15:c.A3684G:p.G1228G,ENSG00000168502:ENST00000306285:exon16:c.A1659G:p.G553G	NA	NA	18p11.22	NA	Name=Pol2	NA	NA	rs581894	0.6	0.6	0.58	0.589058	0.6342	0.4038	0.6441	0.7617	0.4611	0.64	0.42	0.62	0.74	0.5897	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.24847	NA	NA	0.594922	0.723056	ID=COSM438417;OCCURENCE=1(breast)	0.645	NA	4.8478446
1167	8	41580636	41580636	T	C	intronic	ANK1	NA	NA	NA	intronic	ENSG00000029534	NA	NA	NA	NA	NA	8p11.21	NA	NA	Name=8	NA	rs17661203	0.03	0.03	0.024	0.0225639	0.0537	0.001	0.0504	0.0113	0.0082	0.06	NA	0.04	0.02	0.0446	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.976554	NA	NA	0.05407	0.019746	NA	0.109	NA	4.84763
1167	1	86965419	86965419	T	C	exonic	CLCA1	NA	synonymous SNV	CLCA1:NM_001285:exon14:c.T2436C:p.T812T	exonic	ENSG00000016490	NA	synonymous SNV	ENSG00000016490:ENST00000394711:exon14:c.T2436C:p.T812T,ENSG00000016490:ENST00000234701:exon15:c.T2436C:p.T812T	NA	NA	1p22.3	NA	NA	NA	NA	rs1882753	0.35	0.35	0.34	0.352636	0.2604	0.5446	0.2291	0.2837	0.4305	0.26	0.54	0.25	0.34	0.2985	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.470462	NA	NA	0.260233	0.266349	NA	0.348	NA	4.8475336
1167	19	48722180	48722180	C	T	exonic	CARD8	NA	synonymous SNV	CARD8:NM_001184900:exon9:c.G1251A:p.E417E,CARD8:NM_001184901:exon9:c.G1101A:p.E367E,CARD8:NM_014959:exon10:c.G1101A:p.E367E	exonic	ENSG00000105483	NA	synonymous SNV	ENSG00000105483:ENST00000357778:exon8:c.G426A:p.E142E,ENSG00000105483:ENST00000359009:exon8:c.G933A:p.E311E,ENSG00000105483:ENST00000391898:exon9:c.G1251A:p.E417E,ENSG00000105483:ENST00000447740:exon9:c.G1101A:p.E367E,ENSG00000105483:ENST00000520153:exon10:c.G1101A:p.E367E,ENSG00000105483:ENST00000521613:exon10:c.G1101A:p.E367E,ENSG00000105483:ENST00000519940:exon12:c.G1251A:p.E417E	NA	NA	19q13.33	NA	NA	NA	NA	rs10500299	0.22	0.22	0.203	0.259585	0.2465	0.1766	0.3487	0.2042	0.3701	0.25	0.16	0.31	0.18	0.2904	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.566251	NA	NA	0.282442	0.208806	NA	0.152	NA	4.8473246
1167	16	66599773	66599773	T	G	intronic	CKLF,CKLF-CMTM1	NA	NA	NA	intronic	ENSG00000217555,ENSG00000254788	NA	NA	NA	NA	NA	16q21	NA	NA	Name=2	NA	rs2232728	0.08	0.08	0.077	0.0994409	0.0497	0.1101	0.1427	0.0991	0.1094	0.05	0.11	0.13	0.08	0.0744	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.050869	NA	NA	0.028605	0.098819	ID=COSN165233;OCCURENCE=1(breast)	0.051	NA	4.847295
1167	9	117253973	117253973	T	C	intronic	DFNB31	NA	NA	NA	ncRNA_exonic	ENSG00000271214	NA	NA	NA	Score=445;Name=lod=86	NA	9q32	NA	NA	NA	NA	rs7036125	0.43	0.43	0.411	0.412141	0.4861	0.4067	0.4424	0.3404	0.4172	0.49	0.43	0.43	0.31	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.707573	NA	NA	NA	NA	NA	0.464	NA	4.8472333
1167	5	126506531	126506531	A	T	intergenic	C5orf63,MEGF10	dist=97347;dist=119925	NA	NA	ncRNA_exonic	ENSG00000250080	NA	NA	NA	Score=730;Name=lod=1238	NA	5q23.2	NA	NA	NA	NA	rs12188873	0.07	0.07	0.068	0.0499201	0.1531	0.004	0.0908	0.003	0.0256	0.15	0.0017	0.09	0.01	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.033064	NA	NA	NA	NA	NA	0.072	NA	4.8469
1167	6	33768726	33768726	A	T	intronic	MLN	NA	NA	NA	intronic	ENSG00000096395	NA	NA	NA	NA	NA	6p21.31	NA	Name=ERalpha_a	NA	NA	rs34884883	0.09	0.09	0.088	0.0746805	0.1531	0.0516	0.134	0.0113	0.0613	0.16	0.06	0.12	0.01	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.305492	NA	NA	NA	NA	NA	0.08	NA	4.8469
1167	18	60083076	60083076	G	C	intergenic	TNFRSF11A,ZCCHC2	dist=28133;dist=107582	NA	NA	ncRNA_exonic	ENSG00000241088	NA	NA	NA	Score=746;Name=lod=1438	NA	18q21.33	NA	NA	NA	NA	rs2980977	0.2	0.2	0.188	0.244808	0.1531	0.2272	0.1556	0.2307	0.4397	0.15	0.27	0.19	0.19	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.2931	NA	NA	NA	NA	NA	0.217	NA	4.8469
1167	20	49747788	49747788	A	C	intergenic	KCNG1,NFATC2	dist=108113;dist=255706	NA	NA	ncRNA_exonic	ENSG00000228820	NA	NA	NA	Score=786;Name=lod=2086	NA	20q13.13	NA	NA	NA	NA	rs13040884	0.07	0.07	0.066	0.066893	0.1531	0.0198	0.0504	0.0219	0.0992	0.15	0.02	0.06	0.02	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.393325	NA	NA	NA	NA	NA	0.109	NA	4.8469
1167	20	49747942	49747942	A	T	intergenic	KCNG1,NFATC2	dist=108267;dist=255552	NA	NA	ncRNA_exonic	ENSG00000228820	NA	NA	NA	Score=786;Name=lod=2086	NA	20q13.13	NA	NA	NA	NA	rs34182648	0.07	0.07	0.076	0.066893	0.1531	0.0198	0.0504	0.0219	0.0992	0.15	0.02	0.06	0.02	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.106237	NA	NA	NA	NA	NA	0.109	NA	4.8469
1167	18	48586344	48586344	C	T	intronic	SMAD4	NA	NA	NA	intronic	ENSG00000141646	NA	NA	NA	NA	NA	18q21.2	NA	NA	Name=2	NA	rs948588	0.05	0.05	0.051	0.038738	0.0805	0.0446	0.0288	0.0015	0.047	0.08	0.05	0.03	0.002	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.31553	NA	NA	0.07291	0.013728	NA	0.036	NA	4.84659
1167	1	55517940	55517940	G	A	intronic	PCSK9	NA	NA	NA	intronic	ENSG00000169174	NA	NA	NA	NA	NA	1p32.3	NA	NA	NA	NA	rs11800231	0.08	0.08	0.082	0.0828674	0.0527	0.0268	0.0533	0.1899	0.0481	0.05	0.03	0.05	0.18	0.0549	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.155727	NA	NA	0.045814	0.169995	NA	0.101	CLINSIG=non-pathogenic;CLNDBN=Familial_hypercholesterolemia;CLNREVSTAT=single;CLNACC=RCV000030350.1;CLNDSDB=MedGen:OMIM:OMIM:SNOMED_CT:SNOMED_CT;CLNDSDBID=C0020445:143890:144400:397915002:398036000	4.846586
1167	6	29912968	29912968	C	G	intronic	HLA-A	NA	NA	NA	intronic	ENSG00000206503	NA	NA	NA	NA	NA	6p22.1	NA	Name=Pol2-4H8,Pol2	NA	NA	rs3823339	0.04	0.04	0.042	0.0411342	0.0477	0.0387	0.0231	0.0378	0.0542	0.05	0.05	0.02	0.04	0.0523	0.053	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.075788	NA	NA	0.053488	0.03291	NA	0.022	NA	4.846512
1167	6	162990039	162990039	T	C	intronic	PARK2	NA	NA	NA	ncRNA_exonic	ENSG00000227913	NA	NA	NA	Score=588;Name=lod=328	NA	6q26	NA	NA	NA	NA	rs6919746	0.55	0.55	0.505	0.578674	0.4871	0.7143	0.5389	0.5461	0.6053	0.46	0.71	0.52	0.52	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.109382	NA	NA	NA	NA	NA	NA	NA	4.8462333
1167	6	162990446	162990446	A	G	intronic	PARK2	NA	NA	NA	ncRNA_exonic	ENSG00000227913	NA	NA	NA	Score=674;Name=lod=732	NA	6q26	NA	NA	NA	NA	rs10945847	0.57	0.57	0.546	0.579872	0.4871	0.7143	0.5389	0.5507	0.6053	0.48	0.74	0.54	0.54	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.344435	NA	NA	NA	NA	NA	0.587	NA	4.8462333
1167	1	26799941	26799941	A	G	intronic	HMGN2	NA	NA	NA	intronic	ENSG00000198830	NA	NA	NA	NA	NA	1p36.11	NA	Name=HA-E2F1	NA	NA	rs2255389	0.07	0.07	0.048	0.0688898	0.0447	0.0476	0.1268	0.0703	0.0726	0.05	0.06	0.12	0.07	0.065	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.516178	NA	NA	0.044302	0.061961	NA	0.036	NA	4.845998
1167	11	74419378	74419378	C	T	exonic	CHRDL2	NA	synonymous SNV	CHRDL2:NM_015424:exon5:c.G495A:p.P165P	exonic	ENSG00000054938	NA	nonsynonymous SNV	ENSG00000054938:ENST00000376324:exon3:c.G341A:p.R114H	NA	NA	11q13.4	NA	NA	NA	NA	rs7948433	0.39	0.39	0.379	0.333866	0.3807	0.5357	0.5677	0.1346	0.181	0.39	0.56	0.53	0.1	0.3971	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.923796	1.923796	0.07	0.376281	0.175774	NA	0.312	NA	4.845919
1167	1	220331319	220331319	T	G	intronic	RAB3GAP2	NA	NA	NA	intronic	ENSG00000118873	NA	NA	NA	NA	NA	1q41	NA	NA	Name=18	NA	rs3767654	0.14	0.14	0.124	0.122804	0.1541	0.125	0.245	0.0129	0.1503	0.15	0.16	0.23	0.02	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.871744	NA	NA	NA	NA	NA	0.058	NA	4.8459
1167	7	154862621	154862621	T	A	exonic	HTR5A	NA	synonymous SNV	HTR5A:NM_024012:exon1:c.T12A:p.P4P	exonic	ENSG00000157219	NA	synonymous SNV	ENSG00000157219:ENST00000287907:exon1:c.T12A:p.P4P	NA	NA	7q36.2	NA	NA	NA	NA	rs6320	0.28	0.28	0.282	0.256989	0.2734	0.3492	0.2075	0.211	0.2423	0.27	0.37	0.22	0.22	0.265	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.111074	NA	NA	0.282442	0.20926	ID=COSM150432;OCCURENCE=1(stomach)	0.29	NA	4.8458246
1167	20	30954295	30954295	A	G	intronic	ASXL1	NA	NA	NA	intronic	ENSG00000171456	NA	NA	NA	NA	NA	20q11.21	NA	Name=BATF,IRF4_(M-17),PU.1	Name=8	NA	rs2295454	0.42	0.42	0.384	0.408746	0.3499	0.744	0.4337	0.1672	0.4325	0.36	0.74	0.37	0.17	0.419	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.002201	NA	NA	0.385581	0.194054	NA	0.21	NA	4.845519
1168	8	82547211	82547211	G	A	intergenic	FABP12,IMPA1	dist=103661;dist=21940	NA	NA	ncRNA_exonic	ENSG00000205184	NA	NA	NA	Score=486;Name=lod=126	NA	8q21.13	NA	NA	NA	NA	rs2912818	0.24	0.24	0.205	0.192692	0.1551	0.5853	0.1556	0.0151	0.093	0.16	0.58	0.14	0.03	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.705923	NA	NA	NA	NA	NA	0.167	NA	4.8449
1168	5	135276847	135276847	T	C	exonic	FBXL21	NA	unknown	UNKNOWN	exonic	ENSG00000164616	NA	unknown	UNKNOWN	Score=507;Name=lod=153	NA	5q31.1	Score=769;Name=V$AHRARNT_02	NA	NA	NA	rs31547	0.72	0.72	0.679	0.734425	0.7078	0.7827	0.7637	0.6437	0.8139	0.72	0.78	0.73	0.64	0.735	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.271745	NA	NA	0.712509	0.670412	NA	0.623	NA	4.844691
1168	3	118645113	118645113	G	C	intronic	IGSF11	NA	NA	NA	intronic	ENSG00000144847	NA	NA	NA	Score=295;Name=lod=21	NA	3q13.32	NA	NA	NA	NA	rs74997453	0.07	0.07	0.043	0.0519169	0.0487	0.0556	0.196	0.0045	0.0133	0.05	0.07	0.19	0.01	0.0603	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5.368084	5.368084	NA	0.046628	0.013391	NA	0.051	NA	4.844372
1168	21	41142940	41142940	G	A	exonic	IGSF5	NA	synonymous SNV	IGSF5:NM_001080444:exon4:c.G516A:p.P172P	exonic	ENSG00000183067	NA	synonymous SNV	ENSG00000183067:ENST00000380588:exon4:c.G516A:p.P172P	NA	NA	21q22.2	NA	NA	NA	NA	rs2837200	0.13	0.13	0.097	0.101637	0.2873	NA	0.1412	0.0121	0.1084	0.27	NA	0.16	0.02	0.2193	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.206453	NA	NA	0.315814	0.05901	NA	0.13	NA	4.8442526
1168	17	20163529	20163529	A	G	exonic	SPECC1	NA	synonymous SNV	SPECC1:NM_001033555:exon10:c.A2619G:p.A873A,SPECC1:NM_001033553:exon12:c.A2862G:p.A954A,SPECC1:NM_001243439:exon12:c.A2862G:p.A954A	exonic	ENSG00000128487	NA	synonymous SNV	ENSG00000128487:ENST00000536879:exon9:c.A882G:p.A294A,ENSG00000128487:ENST00000395530:exon10:c.A2619G:p.A873A,ENSG00000128487:ENST00000261503:exon12:c.A2862G:p.A954A,ENSG00000128487:ENST00000395527:exon12:c.A2862G:p.A954A	Score=630;Name=lod=484	NA	17p11.2	NA	NA	NA	NA	rs2703791	0.79	0.79	0.819	0.819289	0.5716	0.9861	0.6686	0.9713	0.8037	0.59	0.99	0.64	0.97	0.6741	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.237862	1.237862	NA	0.576977	0.909442	NA	0.732	NA	4.8439896
1168	4	110268476	110268476	G	C	intergenic	COL25A1,SEC24B-AS1	dist=44677;dist=82643	NA	NA	ncRNA_exonic	ENSG00000249465	NA	NA	NA	Score=702;Name=lod=947	NA	4q25	NA	NA	NA	NA	rs28542804	0.23	0.23	0.27	0.246006	0.1561	0.0446	0.134	0.6263	0.1115	0.15	0.05	0.14	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.21093	2.21093	NA	NA	NA	NA	0.37	NA	4.8439
1168	8	29885928	29885928	C	G	intergenic	MIR3148,MIR548O2	dist=71064;dist=34330	NA	NA	ncRNA_exonic	ENSG00000254013	NA	NA	NA	Score=798;Name=lod=2339	NA	8p12	NA	NA	NA	NA	rs10113613	NA	NA	0.147	0.139177	0.1561	0.1022	0.0965	0.1717	0.1462	NA	NA	NA	NA	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.116209	NA	NA	NA	NA	ID=COSN168305;OCCURENCE=1(large_intestine)	0.109	NA	4.8439
1168	12	63114156	63114156	A	G	intronic	PPM1H	NA	NA	NA	intronic	ENSG00000111110	NA	NA	NA	NA	NA	12q14.2	Score=958;Name=V$P53_02	NA	NA	NA	rs2270484	0.18	0.18	0.163	0.191893	0.1561	0.2599	0.2695	0.1082	0.2168	0.15	0.24	0.23	0.1	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.346895	2.346895	NA	NA	NA	NA	0.094	NA	4.8439
1168	13	52520627	52520627	C	G	intronic	ATP7B	NA	NA	NA	intronic	ENSG00000123191	NA	NA	NA	NA	NA	13q14.3	NA	NA	NA	NA	rs7325983	0.1	0.1	0.096	0.113618	0.0398	0.0397	0.0836	0.267	0.0798	0.03	0.04	0.09	0.27	0.072	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.713859	NA	NA	0.044375	0.202213	NA	0.087	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=Wilson's_disease|not_specified;CLNREVSTAT=single|single;CLNACC=RCV000029358.1|RCV000078045.1;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet:SNOMED_CT|.;CLNDSDBID=NBK1512:C0019202:277900:ORPHA905:88518009|.	4.843825
1168	19	17338033	17338033	C	T	intronic	OCEL1	NA	NA	NA	intronic	ENSG00000099330	NA	NA	NA	NA	NA	19p13.11	NA	Name=TAF1,ZBTB7A_(SC-34508),USF-1	Name=8	NA	rs891202	0.49	0.49	0.471	0.466853	0.3757	0.5317	0.4726	0.5537	0.3722	0.38	0.54	0.46	0.62	0.4086	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.760966	NA	NA	0.372147	0.532698	NA	0.333	NA	4.843553
1168	5	118988269	118988269	A	G	intergenic	FAM170A,PRR16	dist=16752;dist=811750	NA	NA	ncRNA_exonic	ENSG00000250895	NA	NA	NA	Score=787;Name=lod=2111	NA	5q23.1	NA	NA	NA	NA	rs1820725	0.1	0.1	0.093	0.104433	0.1571	0.0784	0.098	0.0038	0.2178	0.17	0.07	0.11	0.0041	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.098314	NA	NA	NA	NA	NA	0.058	NA	4.8429
1168	8	82529812	82529812	C	T	intergenic	FABP12,IMPA1	dist=86262;dist=39339	NA	NA	ncRNA_exonic	ENSG00000254151	NA	NA	NA	Score=458;Name=lod=97	NA	8q21.13	NA	NA	NA	NA	rs2955027	0.23	0.23	0.199	0.190695	0.1571	0.5873	0.1513	0.0061	0.0941	0.16	0.59	0.14	0.02	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.451641	NA	NA	NA	NA	NA	0.145	NA	4.8429
1168	8	82529873	82529873	G	A	intergenic	FABP12,IMPA1	dist=86323;dist=39278	NA	NA	ncRNA_exonic	ENSG00000254151	NA	NA	NA	Score=604;Name=lod=379	NA	8q21.13	NA	NA	NA	NA	rs2912822	0.23	0.23	0.205	0.190895	0.1571	0.5873	0.1513	0.0061	0.0951	0.16	0.59	0.14	0.02	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.138878	NA	NA	NA	NA	NA	0.145	NA	4.8429
1168	11	7441952	7441952	A	G	intronic	SYT9	NA	NA	NA	intronic	ENSG00000170743	NA	NA	NA	NA	NA	11p15.4	NA	NA	Name=4	NA	rs11041373	0.19	0.19	0.181	0.174321	0.1571	0.3214	0.1326	0.1331	0.1258	0.15	0.31	0.14	0.13	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.524755	NA	NA	NA	NA	ID=COSN163877;OCCURENCE=1(breast)	0.13	NA	4.8429
1168	20	30147554	30147554	C	A	intronic	HM13	NA	NA	NA	intronic	ENSG00000101294	NA	NA	NA	NA	NA	20q11.21	NA	Name=Egr-1	NA	NA	rs6058103	0.26	0.26	0.292	0.272764	0.1571	NA	0.1816	0.7905	0.0378	0.16	NA	0.2	0.77	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.281846	NA	NA	NA	NA	NA	0.326	NA	4.8429
1168	22	36556698	36556698	C	T	intronic	APOL3	NA	NA	NA	intronic	ENSG00000128284	NA	NA	NA	NA	NA	22q12.3	NA	Name=Oct-2,Pol2,POU2F2,TBP	NA	NA	rs45577431	0.04	0.04	0.045	0.0305511	0.0537	0.0268	0.036	0.0189	0.0225	0.05	0.03	0.04	0.03	0.0448	0.087	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.207342	NA	NA	0.058605	0.022923	NA	0.109	NA	4.842895
1168	6	151686905	151686905	C	T	exonic	ZBTB2	NA	synonymous SNV	ZBTB2:NM_020861:exon3:c.G1296A:p.E432E	exonic	ENSG00000181472	NA	synonymous SNV	ENSG00000181472:ENST00000325144:exon3:c.G1296A:p.E432E	Score=410;Name=lod=62	NA	6q25.1	NA	NA	NA	NA	rs11155787	0.47	0.47	0.451	0.423922	0.6382	0.2778	0.5447	0.3517	0.3661	0.64	0.33	0.56	0.33	0.5488	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.032161	NA	NA	0.63686	0.393781	NA	0.507	NA	4.8428066
1168	16	68721470	68721470	T	C	exonic	CDH3	NA	synonymous SNV	CDH3:NM_001793:exon12:c.T1626C:p.N542N	exonic	ENSG00000062038	NA	synonymous SNV	ENSG00000062038:ENST00000581171:exon11:c.T1461C:p.N487N,ENSG00000062038:ENST00000264012:exon12:c.T1626C:p.N542N,ENSG00000062038:ENST00000429102:exon12:c.T1626C:p.N542N	NA	NA	16q22.1	Score=752;Name=V$PPARA_01	NA	NA	NA	rs2296405	0.62	0.62	0.606	0.597444	0.6173	0.5536	0.5476	0.6657	0.5654	0.62	0.58	0.57	0.69	0.5881	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.131212	NA	NA	0.618488	0.670382	NA	0.703	NA	4.8427786
1168	14	20444193	20444193	A	C	exonic	OR4K15	NA	synonymous SNV	OR4K15:NM_001005486:exon1:c.A516C:p.S172S	exonic	ENSG00000169488	NA	synonymous SNV	ENSG00000169488:ENST00000305051:exon1:c.A516C:p.S172S	NA	NA	14q11.2	NA	NA	NA	NA	rs2318556	0.32	0.32	0.329	0.376398	0.2435	0.1498	0.2017	0.7481	0.3681	0.25	0.14	0.19	0.72	0.2958	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.359693	NA	NA	0.284601	0.690649	NA	0.413	NA	4.8427656
1168	17	43003484	43003484	T	C	exonic	KIF18B	NA	synonymous SNV	KIF18B:NM_001265577:exon16:c.A2523G:p.A841A	exonic	ENSG00000186185	NA	synonymous SNV	ENSG00000186185:ENST00000339151:exon16:c.A2532G:p.A844A,ENSG00000186185:ENST00000593135:exon16:c.A2523G:p.A841A	NA	NA	17q21.31	NA	NA	NA	NA	rs3169733	0.27	0.27	0.31	0.359026	0.2445	0.1488	0.3098	0.5779	0.4325	0.22	0.14	0.31	0.48	0.3049	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.136089	NA	NA	0.274656	0.51352	NA	0.283	NA	4.8426106
1168	5	95236415	95236415	G	A	exonic	ELL2	NA	synonymous SNV	ELL2:NM_012081:exon7:c.C936T:p.D312D	exonic	ENSG00000118985	NA	synonymous SNV	ENSG00000118985:ENST00000513343:exon4:c.C390T:p.D130D,ENSG00000118985:ENST00000237853:exon7:c.C936T:p.D312D	NA	NA	5q15	NA	NA	NA	NA	rs17085249	0.33	0.33	0.34	0.340655	0.2793	0.4325	0.2406	0.3654	0.3466	0.29	0.43	0.23	0.35	0.2835	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.747109	NA	NA	0.261279	0.341126	ID=COSM1132083;OCCURENCE=1(prostate)	0.377	NA	4.8425876
1168	8	142229891	142229891	A	G	exonic	SLC45A4	NA	synonymous SNV	SLC45A4:NM_001080431:exon3:c.T315C:p.I105I	exonic	ENSG00000022567	NA	synonymous SNV	ENSG00000022567:ENST00000024061:exon3:c.T315C:p.I105I,ENSG00000022567:ENST00000433583:exon3:c.T294C:p.I98I,ENSG00000022567:ENST00000517878:exon3:c.T468C:p.I156I,ENSG00000022567:ENST00000519067:exon3:c.T315C:p.I105I,ENSG00000022567:ENST00000519986:exon3:c.T261C:p.I87I	NA	NA	8q24.3	Score=841;Name=V$MRF2_01	NA	NA	NA	rs2304279	0.7	0.7	0.666	0.703474	0.6014	0.8175	0.585	0.8003	0.6442	0.58	0.81	0.65	0.79	0.6504	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.904787	NA	NA	0.572359	0.782431	NA	0.667	NA	4.8425076
1168	18	60110098	60110098	G	A	intergenic	TNFRSF11A,ZCCHC2	dist=55155;dist=80560	NA	NA	ncRNA_exonic	ENSG00000266920	NA	NA	NA	Score=860;Name=lod=4160	NA	18q21.33	NA	NA	NA	NA	rs3744929	0.26	0.26	0.237	0.273363	0.1581	0.4286	0.3372	0.1619	0.3374	0.17	0.41	0.29	0.18	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.072284	NA	NA	NA	NA	NA	0.181	NA	4.8419
1168	18	60110160	60110160	G	A	intergenic	TNFRSF11A,ZCCHC2	dist=55217;dist=80498	NA	NA	ncRNA_exonic	ENSG00000266920	NA	NA	NA	Score=860;Name=lod=4160	NA	18q21.33	NA	NA	NA	NA	rs3744928	0.26	0.26	0.23	0.273962	0.1581	0.4296	0.3357	0.1619	0.3405	0.17	0.41	0.29	0.18	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.023836	NA	NA	NA	NA	NA	0.181	NA	4.8419
1168	19	36015521	36015521	C	T	intronic	SBSN	NA	NA	NA	intronic	ENSG00000189001	NA	NA	NA	NA	NA	19q13.12	NA	Name=NRSF	NA	NA	rs58183088	0.11	0.11	0.101	0.118411	0.1581	0.0446	0.0994	0.1331	0.1472	0.15	0.04	0.11	0.11	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.174546	NA	NA	NA	NA	NA	0.109	NA	4.8419
1168	20	34142670	34142670	T	G	intronic	ERGIC3	NA	NA	NA	intronic	ENSG00000125991	NA	NA	NA	NA	NA	20q11.22	Score=815;Name=V$GRE_C	NA	NA	NA	rs73283830	0.15	0.15	0.144	0.192492	0.1581	0.1399	0.1657	0.1899	0.3047	0.14	0.13	0.18	0.17	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.59063	NA	NA	NA	NA	NA	0.13	NA	4.8419
1168	7	124116470	124116470	A	G	intergenic	TMEM229A,GPR37	dist=442947;dist=269185	NA	NA	ncRNA_exonic	ENSG00000230268	NA	NA	NA	Score=547;Name=lod=223	NA	7q31.33	NA	NA	NA	NA	rs2402730	0.16	0.16	0.111	0.180112	0.0268	0.4266	0.1542	0.0651	0.2577	0.03	0.42	0.14	0.08	0.1045	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.113204	2.113204	0.46	0.026834	0.062561	NA	0.094	NA	4.841866
1168	11	17139255	17139255	G	T	intronic	PIK3C2A	NA	NA	NA	intronic	ENSG00000011405	NA	NA	NA	Score=349;Name=lod=35	NA	11p15.1	NA	NA	NA	NA	rs147891939	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.1582	0.076	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.37106	NA	NA	NA	NA	NA	0.116	NA	4.8418
1168	12	113424893	113424893	C	G	exonic	OAS2	NA	synonymous SNV	OAS2:NM_001032731:exon2:c.C228G:p.T76T,OAS2:NM_002535:exon2:c.C228G:p.T76T,OAS2:NM_016817:exon2:c.C228G:p.T76T	exonic	ENSG00000111335	NA	synonymous SNV	ENSG00000111335:ENST00000342315:exon2:c.C228G:p.T76T,ENSG00000111335:ENST00000392583:exon2:c.C228G:p.T76T,ENSG00000111335:ENST00000449768:exon2:c.C228G:p.T76T	NA	NA	12q24.13	NA	NA	NA	NA	rs2072138	0.22	0.22	0.205	0.21905	0.2753	0.0863	0.3401	0.2141	0.2188	0.29	0.11	0.29	0.21	0.2618	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.144726	NA	NA	0.287791	0.235361	NA	0.232	NA	4.8417756
1168	11	64070930	64070930	T	C	intronic	TEX40	NA	NA	NA	ncRNA_intronic	ENSG00000257069	NA	NA	NA	NA	NA	11q13.1	NA	NA	Name=9	NA	rs66968227	0.11	0.11	0.095	0.0882588	0.16	0.1071	0.1182	0.0242	0.0603	0.16	0.11	0.12	0.02	0.1795	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.548696	NA	NA	0.152458	0.048184	NA	0.058	NA	4.8413753
1168	14	74876501	74876501	G	C	UTR5	SYNDIG1L	NM_001105579:c.-54C>G	NA	NA	UTR5	ENSG00000183379	ENST00000331628:c.-54C>G,ENST00000554823:c.-54C>G,ENST00000554953:c.-54C>G	NA	NA	Score=336;Name=lod=31	NA	14q24.3	NA	NA	NA	NA	rs4026651	0.42	0.42	0.39	0.399161	0.492	0.3185	0.4121	0.3457	0.4499	0.51	0.33	0.46	0.37	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.016776	NA	NA	NA	NA	NA	0.391	NA	4.8413334
1168	6	30030135	30030135	G	A	intronic	ZNRD1	NA	NA	NA	intronic	ENSG00000066379	NA	NA	NA	NA	NA	6p22.1	NA	NA	Name=4	NA	rs9261270	0.05	0.05	0.05	0.0413339	0.0507	0.0357	0.0403	0.0499	0.0266	0.05	0.04	0.04	0.05	0.0502	0.058	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.449516	NA	NA	0.057955	0.051291	NA	0.029	NA	4.841145
1168	5	86180557	86180557	A	G	intergenic	COX7C,MIR4280	dist=263974;dist=230139	NA	NA	ncRNA_exonic	ENSG00000242477	NA	NA	NA	Score=776;Name=lod=1902	NA	5q14.3	NA	NA	NA	NA	rs2452757	0.12	0.12	0.101	0.116014	0.159	0.001	0.0793	0.2186	0.0777	0.17	0.0017	0.1	0.17	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.339481	NA	NA	NA	NA	NA	0.072	NA	4.841
1168	15	99903547	99903547	G	A	intronic	LRRC28	NA	NA	NA	intronic	ENSG00000168904	NA	NA	NA	NA	NA	15q26.3	NA	Name=MafK_(ab50322)	NA	NA	rs62023858	0.11	0.11	0.106	0.10024	0.159	0.0645	0.0879	0.0893	0.1002	0.16	0.07	0.09	0.07	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.021445	NA	NA	NA	NA	NA	0.043	NA	4.841
1168	6	97575196	97575196	C	T	ncRNA_intronic	MIR548H3	NA	NA	NA	intronic	ENSG00000186231	NA	NA	NA	Score=391;Name=lod=52	NA	6q16.1	NA	NA	NA	NA	rs2206094	0.47	0.47	0.494	0.53115	0.493	0.246	0.4063	0.8162	0.5675	0.48	0.22	0.4	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.33078	3.33078	NA	NA	NA	NA	0.572	NA	4.8403333
1168	19	282875	282875	G	A	intronic	PPAP2C	NA	NA	NA	intronic	ENSG00000141934	NA	NA	NA	NA	NA	19p13.3	NA	Name=PU.1	NA	NA	rs62103050	0.04	0.04	0.036	0.0301518	0.0736	0.002	0.0375	0.0015	0.0481	0.08	0.0017	0.05	0.002	NA	0.086	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.116582	NA	NA	0.086109	0.014451	NA	0.029	NA	4.840291
1168	18	48586184	48586184	A	G	intronic	SMAD4	NA	NA	NA	intronic	ENSG00000141646	NA	NA	NA	NA	NA	18q21.2	NA	NA	NA	NA	rs948589	0.03	0.03	0.036	0.0295527	0.0805	NA	0.0274	0.0015	0.047	0.08	NA	0.03	0.002	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.651456	NA	NA	0.079307	0.012763	NA	0.036	CLINSIG=non-pathogenic;CLNDBN=Juvenile_polyposis_syndrome;CLNREVSTAT=single;CLNACC=RCV000021697.1;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet:Orphanet:SNOMED_CT;CLNDSDBID=NBK1469:C0345893:174900:ORPHA2929:ORPHA329971:9273005	4.840193
1168	14	91142817	91142817	G	A	intronic	TTC7B	NA	NA	NA	intronic	ENSG00000165914	NA	NA	NA	NA	NA	14q32.11	NA	NA	Name=4	NA	rs80256733	0.03	0.03	0.029	0.0257588	0.0626	0.0079	0.0303	0.003	0.0337	0.06	0.01	0.02	0.01	0.0427	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.002345	NA	NA	0.054535	0.010894	NA	0.022	NA	4.840165
1168	12	125437019	125437019	T	C	exonic	DHX37	NA	synonymous SNV	DHX37:NM_032656:exon21:c.A2793G:p.A931A	exonic	ENSG00000150990	NA	synonymous SNV	ENSG00000150990:ENST00000544745:exon18:c.A2154G:p.A718A,ENSG00000150990:ENST00000308736:exon21:c.A2793G:p.A931A	Score=433;Name=lod=77	NA	12q24.31	NA	NA	NA	NA	rs4429156	0.63	0.63	0.537	0.65615	0.5994	0.8462	0.6571	0.4448	0.8037	0.59	0.84	0.64	0.42	0.6397	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.344301	2.344301	NA	0.587442	0.442805	NA	0.457	NA	4.8401246
1168	2	81424517	81424517	C	T	intergenic	CTNNA2,LOC1720	dist=548529;dist=1659410	NA	NA	ncRNA_exonic	ENSG00000234429	NA	NA	NA	Score=589;Name=lod=331	NA	2p12	NA	NA	NA	NA	rs10177950	0.15	0.15	0.13	0.138578	0.16	0.1845	0.2262	0.0174	0.1708	0.16	0.2	0.24	0.01	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.036533	NA	NA	NA	NA	ID=COSN166151;OCCURENCE=1(breast)	0.094	NA	4.84
1168	4	81001542	81001542	C	T	intergenic	ANTXR2,PRDM8	dist=7065;dist=104882	NA	NA	ncRNA_exonic	ENSG00000236530	NA	NA	NA	Score=569;Name=lod=273	NA	4q21.21	NA	NA	NA	NA	rs4234850	0.46	0.46	0.48	0.503594	0.16	0.6379	0.3372	0.8033	0.4315	0.15	0.65	0.31	0.83	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.142662	NA	NA	NA	NA	NA	0.543	NA	4.84
1168	10	54173157	54173157	A	G	intergenic	DKK1,MBL2	dist=95740;dist=351983	NA	NA	ncRNA_exonic	ENSG00000227972	NA	NA	NA	Score=512;Name=lod=160	NA	10q21.1	NA	NA	NA	NA	rs11813600	0.11	0.11	0.101	0.0880591	0.16	0.1518	0.0677	0.0091	0.0695	0.15	0.15	0.09	0.01	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.872666	1.872666	NA	NA	NA	NA	0.058	NA	4.84
1168	19	20235929	20235929	G	A	intergenic	ZNF90,ZNF486	dist=3952;dist=42094	NA	NA	ncRNA_exonic	ENSG00000224864	NA	NA	NA	Score=524;Name=lod=180	NA	19p12	NA	NA	NA	NA	rs1654280	0.37	0.37	0.368	0.379992	0.16	0.4444	0.2795	0.6581	0.2352	0.18	0.48	0.25	0.62	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.068545	NA	NA	NA	NA	NA	0.254	NA	4.84
1168	9	140002187	140002187	C	T	intronic	MAN1B1	NA	NA	NA	exonic	ENSG00000177239	NA	unknown	UNKNOWN	NA	NA	9q34.3	NA	NA	NA	NA	rs12000517	0.24	0.24	0.25	0.254792	0.3499	0.0109	0.2363	0.3336	0.3149	0.35	0.01	0.25	0.35	0.3104	0.35	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.959	T	0.000	T	.	0.199	5.071	1.64	0.254	0.270	6.534	0.198683	NA	NA	NA	NA	NA	0.377	NA	4.8397
1168	6	30314607	30314607	A	G	UTR3	RPP21,TRIM39-RPP21	NM_024839:c.*20A>G,NM_001199121:c.*57A>G,NM_001199120:c.*20A>G;NM_001199119:c.*20A>G	NA	NA	UTR3	ENSG00000241370,ENSG00000248167	ENST00000433076:c.*20A>G,ENST00000428040:c.*20A>G,ENST00000442966:c.*20A>G,ENST00000436442:c.*57A>G;ENST00000513556:c.*20A>G	NA	NA	Score=259;Name=lod=15	NA	6p22.1	NA	NA	NA	NA	rs974962	0.19	0.19	0.151	0.203275	0.1531	0.4097	0.2161	0.0091	0.2955	0.15	0.38	0.19	0.01	0.1855	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.15071	4.15071	NA	0.155039	0.038716	NA	0.254	NA	4.8396944
1168	1	16952993	16952993	C	G	ncRNA_exonic	CROCCP2	NA	NA	NA	ncRNA_exonic	ENSG00000215908	NA	NA	NA	Score=522;Name=lod=176	NA	1p36.13	NA	NA	NA	NA	rs942268	NA	NA	0.804	0.854433	0.827	0.9643	0.8429	0.8699	0.7566	NA	NA	NA	NA	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.001949	NA	NA	NA	NA	NA	0.768	NA	4.8396666
1168	15	21937592	21937592	T	C	ncRNA_exonic	LOC646214	NA	NA	NA	ncRNA_exonic	ENSG00000237161	NA	NA	NA	Score=468;Name=lod=106	NA	15q11.2	NA	NA	NA	NA	rs4984134	NA	NA	NA	0.856629	0.827	0.8036	0.9006	0.9357	0.8037	NA	NA	NA	NA	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.251959	NA	NA	NA	NA	NA	0.928	NA	4.8396666
1168	19	9061559	9061559	C	G	exonic	MUC16	NA	synonymous SNV	MUC16:NM_024690:exon3:c.G25887C:p.T8629T	exonic	ENSG00000181143	NA	synonymous SNV	ENSG00000181143:ENST00000397910:exon3:c.G25887C:p.T8629T	NA	NA	19p13.2	NA	NA	NA	NA	rs1423052	0.39	0.39	0.39	0.383187	0.2525	0.5933	0.4006	0.3472	0.3374	0.26	0.65	0.37	0.32	0.3151	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.368706	NA	NA	0.259706	0.325863	NA	0.384	NA	4.8393606
1168	10	38108176	38108176	C	T	intronic	ZNF248	NA	NA	NA	ncRNA_exonic	ENSG00000228828	NA	NA	NA	Score=814;Name=lod=2706	NA	10p11.1	NA	NA	NA	NA	rs200910	0.52	0.52	0.506	0.48103	0.494	0.5754	0.5173	0.5386	0.2669	0.5	0.55	0.5	0.51	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.099019	NA	NA	NA	NA	NA	0.529	NA	4.8393333
1168	15	42363887	42363887	T	C	intronic	PLA2G4D	NA	NA	NA	intronic	ENSG00000159337	NA	NA	NA	Score=284;Name=lod=19	NA	15q15.1	NA	NA	NA	NA	rs1712402	0.2	0.2	0.198	0.232029	0.161	0.2063	0.1527	0.2723	0.3333	0.16	0.23	0.16	0.28	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.686015	1.686015	NA	NA	NA	NA	0.217	NA	4.839
1168	20	29873577	29873577	A	G	intergenic	DEFB115,DEFB116	dist=26142;dist=17438	NA	NA	ncRNA_exonic	ENSG00000224628	NA	NA	NA	Score=542;Name=lod=212	NA	20q11.21	NA	NA	NA	NA	rs6061028	0.15	0.15	0.176	0.146366	0.161	0.002	0.0879	0.348	0.0491	0.14	0.0017	0.11	0.36	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.312744	NA	NA	NA	NA	NA	0.145	NA	4.839
1168	7	44100373	44100373	C	T	intronic	DBNL	NA	NA	NA	intronic	ENSG00000136279	NA	NA	NA	Score=445;Name=lod=86	NA	7p13	NA	NA	NA	NA	rs17546439	0.03	0.03	0.021	0.0217652	0.0656	NA	0.0504	0.0023	0.0051	0.06	NA	0.06	0.002	0.0372	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.852664	1.852664	NA	0.058256	0.01044	NA	0.116	NA	4.838944
1168	19	57987905	57987905	G	A	intronic	ZNF772	NA	NA	NA	exonic	ENSG00000197128	NA	stopgain	ENSG00000197128:ENST00000450712:exon2:c.C169T:p.R57X	NA	NA	19q13.43	NA	NA	NA	NA	rs2067055	0.4	0.4	0.377	0.41274	0.2783	0.5893	0.451	0.3124	0.4775	0.3	0.64	0.37	0.31	0.3828	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.998598	2.998598	NA	NA	NA	NA	0.326	NA	4.8389
1168	11	10786142	10786142	C	T	exonic	CTR9	NA	synonymous SNV	CTR9:NM_014633:exon12:c.C1461T:p.H487H	exonic	ENSG00000198730	NA	synonymous SNV	ENSG00000198730:ENST00000361367:exon12:c.C1461T:p.H487H	Score=602;Name=lod=374	NA	11p15.3	NA	NA	NA	NA	rs3736326	0.62	0.62	0.58	0.611621	0.6014	0.7847	0.7608	0.3154	0.7382	0.59	0.82	0.74	0.32	0.6377	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.892868	NA	NA	0.589078	0.358928	NA	0.543	NA	4.8384886
1168	3	53883722	53883722	C	G	exonic	IL17RB	NA	synonymous SNV	IL17RB:NM_018725:exon3:c.C126G:p.P42P	exonic	ENSG00000056736	NA	synonymous SNV	ENSG00000056736:ENST00000288167:exon3:c.C126G:p.P42P,ENSG00000056736:ENST00000494338:exon3:c.C126G:p.P42P	Score=376;Name=lod=45	NA	3p21.1	NA	NA	NA	NA	rs1025689	0.46	0.46	0.44	0.430112	0.6332	0.4722	0.4597	0.0802	0.6299	0.63	0.51	0.5	0.1	0.5649	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.884982	NA	NA	0.630349	0.175897	NA	0.391	NA	4.8382176
1168	12	111785586	111785586	T	C	exonic	CUX2	NA	synonymous SNV	CUX2:NM_015267:exon22:c.T3918C:p.D1306D	exonic	ENSG00000111249	NA	synonymous SNV	ENSG00000111249:ENST00000261726:exon22:c.T3918C:p.D1306D	NA	NA	12q24.12	NA	NA	NA	NA	rs3803167	0.5	0.5	0.471	0.527955	0.2435	0.7639	0.451	0.6195	0.5082	0.24	0.82	0.43	0.61	0.3671	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.062174	NA	NA	0.217849	0.536415	NA	0.42	NA	4.8382176
1168	1	201021619	201021619	C	G	intronic	CACNA1S	NA	NA	NA	intronic	ENSG00000081248	NA	NA	NA	NA	NA	1q32.1	NA	Name=c-Myc	NA	NA	rs12029212	0.26	0.26	0.301	0.27516	0.162	0.122	0.1383	0.6929	0.0818	0.16	0.13	0.15	0.66	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.599422	NA	NA	NA	NA	NA	0.275	NA	4.838
1168	11	90015878	90015878	A	G	intergenic	CHORDC1,MIR4490	dist=59346;dist=273064	NA	NA	ncRNA_exonic	ENSG00000214391	NA	NA	NA	Score=892;Name=lod=5600	NA	11q14.3	NA	NA	NA	NA	rs10741332	0.2	0.2	0.153	0.191893	0.162	0.374	0.2752	0.0061	0.227	0.16	0.39	0.26	0.01	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.821532	1.821532	0	NA	NA	NA	0.167	NA	4.838
1168	12	112230036	112230036	G	A	intronic	ALDH2	NA	NA	NA	intronic	ENSG00000111275	NA	NA	NA	NA	NA	12q24.12	NA	NA	Name=40	NA	rs4646777	0.2	0.2	0.189	0.197684	0.162	0.2619	0.1513	0.1929	0.2076	0.16	0.27	0.17	0.19	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.111831	NA	NA	NA	NA	NA	0.196	NA	4.838
1168	16	85121733	85121733	C	A	intronic	KIAA0513	NA	NA	NA	intronic	ENSG00000135709	NA	NA	NA	NA	NA	16q24.1	NA	Name=CTCF	NA	NA	rs3751753	0.28	0.28	0.294	0.301318	0.162	0.2063	0.2795	0.5182	0.2648	0.16	0.24	0.23	0.53	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.868274	NA	NA	NA	NA	NA	0.297	NA	4.838
1168	11	55322211	55322211	A	G	exonic	OR4C15	NA	synonymous SNV	OR4C15:NM_001001920:exon1:c.A429G:p.K143K	exonic	ENSG00000181939	NA	synonymous SNV	ENSG00000181939:ENST00000314644:exon1:c.A429G:p.K143K	NA	NA	11q11	NA	NA	NA	NA	rs9804659	0.28	0.28	0.252	0.252596	0.2833	0.3919	0.3242	0.1014	0.2311	0.29	0.38	0.35	0.1	0.2793	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.099308	NA	NA	0.266294	0.127442	NA	0.225	NA	4.8377726
1168	4	7802292	7802292	G	A	exonic	AFAP1	NA	synonymous SNV	AFAP1:NM_001134647:exon10:c.C1143T:p.T381T,AFAP1:NM_198595:exon10:c.C1143T:p.T381T	exonic	ENSG00000196526	NA	synonymous SNV	ENSG00000196526:ENST00000360265:exon9:c.C1143T:p.T381T,ENSG00000196526:ENST00000382543:exon9:c.C1143T:p.T381T,ENSG00000196526:ENST00000358461:exon10:c.C1143T:p.T381T,ENSG00000196526:ENST00000420658:exon10:c.C1143T:p.T381T	NA	NA	4p16.1	NA	NA	NA	NA	rs11728778	0.15	0.15	0.154	0.111621	0.3042	0.0615	0.1484	0.0106	0.0757	0.29	0.07	0.19	0.02	0.2217	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.360843	NA	NA	0.30314	0.055833	NA	0.123	NA	4.8376266
1168	22	20103189	20103189	T	C	intronic	TRMT2A	NA	NA	NA	intronic	ENSG00000099899	NA	NA	NA	NA	NA	22q11.21	NA	Name=ZNF263	NA	NA	rs79886149	0.04	0.04	0.049	0.0507188	0.0537	0.0813	0.0101	0.0061	0.1053	0.06	0.07	0.01	0.01	0.0546	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.060583	NA	NA	0.054082	0.012727	NA	0.043	NA	4.837618
1168	1	153604029	153604029	C	T	intronic	S100A1,S100A13	NA	NA	NA	ncRNA_exonic	ENSG00000272030	NA	NA	NA	NA	NA	1q21.3	NA	Name=Egr-1	Name=6	NA	rs1046379	0.84	0.84	0.827	0.863419	0.7147	0.8353	0.9049	0.9909	0.8436	0.71	0.83	0.9	0.99	0.7812	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.04529	NA	NA	NA	NA	NA	0.804	NA	4.8374333
1168	1	3563428	3563428	C	T	intronic	WRAP73	NA	NA	NA	intronic	ENSG00000116213	NA	NA	NA	NA	NA	1p36.32	NA	Name=BCL3,Pbx3	NA	NA	rs76161888	0.11	0.11	0.109	0.0936502	0.163	0.005	0.1542	0.1074	0.0521	0.17	0.01	0.16	0.11	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.313983	NA	NA	NA	NA	NA	0.109	NA	4.837
1168	8	28157994	28157994	C	G	intergenic	ELP3,PNOC	dist=109325;dist=16655	NA	NA	ncRNA_exonic	ENSG00000239198	NA	NA	NA	Score=797;Name=lod=2307	NA	8p21.1	NA	NA	NA	NA	rs1966949	0.15	0.15	0.118	0.147764	0.163	0.1647	0.1153	0.1241	0.1697	0.16	0.17	0.13	0.11	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.337326	NA	NA	NA	NA	NA	0.116	NA	4.837
1168	20	5513629	5513629	G	A	intergenic	LINC00654,GPCPD1	dist=28387;dist=11451	NA	NA	ncRNA_exonic	ENSG00000225831	NA	NA	NA	Score=712;Name=lod=1043	NA	20p12.3	NA	NA	NA	NA	rs16991051	0.12	0.12	0.132	0.127396	0.163	0.0556	0.1297	0.152	0.1299	0.15	0.05	0.13	0.15	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.333101	NA	NA	NA	NA	NA	0.13	NA	4.837
1168	20	18529233	18529233	T	A	intronic	SEC23B	NA	NA	NA	intronic	ENSG00000101310	NA	NA	NA	NA	NA	20p11.23	NA	Name=MafF_(M8194),MafK_(SC-477)	NA	NA	rs3736775	0.32	0.32	0.302	0.338858	0.3797	0.4345	0.2867	0.1702	0.4632	0.38	0.37	0.27	0.21	0.3838	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.110376	NA	NA	0.399884	0.219927	NA	0.246	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000081404.1;CLNDSDB=.;CLNDSDBID=.	4.836616
1168	17	7477938	7477938	G	C	exonic	EIF4A1	NA	synonymous SNV	EIF4A1:NM_001204510:exon3:c.G147C:p.A49A,EIF4A1:NM_001416:exon3:c.G147C:p.A49A	exonic	ENSG00000161960	NA	synonymous SNV	ENSG00000161960:ENST00000577929:exon2:c.G99C:p.A33A,ENSG00000161960:ENST00000583802:exon2:c.G39C:p.A13A,ENSG00000161960:ENST00000293831:exon3:c.G147C:p.A49A,ENSG00000161960:ENST00000577269:exon3:c.G147C:p.A49A,ENSG00000161960:ENST00000578495:exon3:c.G147C:p.A49A,ENSG00000161960:ENST00000581544:exon3:c.G147C:p.A49A,ENSG00000161960:ENST00000581770:exon3:c.G150C:p.A50A,ENSG00000161960:ENST00000582169:exon3:c.G39C:p.A13A,ENSG00000161960:ENST00000582746:exon3:c.G147C:p.A49A,ENSG00000161960:ENST00000584784:exon3:c.G147C:p.A49A,ENSG00000161960:ENST00000584860:exon3:c.G99C:p.A33A,ENSG00000161960:ENST00000585024:exon3:c.G141C:p.A47A,ENSG00000161960:ENST00000380512:exon4:c.G99C:p.A33A	Score=617;Name=lod=431	NA	17p13.1	NA	Name=Pol2,Pol2-4H8	NA	NA	rs1057086	0.84	0.84	0.831	0.796725	0.9672	0.7688	0.7133	0.6422	0.9182	0.97	0.82	0.83	0.66	0.8952	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.871674	2.871674	NA	0.967667	0.716977	NA	0.848	NA	4.8365996
1168	1	19568972	19568972	A	G	intronic	EMC1	NA	NA	NA	intronic	ENSG00000127463	NA	NA	NA	Score=461;Name=lod=100	Name=Brain structure	1p36.13	NA	NA	NA	NA	rs710865	0.57	0.57	0.564	0.581869	0.3509	0.7401	0.5115	0.7625	0.4622	0.35	0.75	0.46	0.76	0.4483	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.463327	1.463327	NA	0.364302	0.712438	NA	0.572	NA	4.836498
1168	7	63981563	63981563	A	G	exonic	ZNF680	NA	synonymous SNV	ZNF680:NM_178558:exon4:c.T1569C:p.C523C	exonic	ENSG00000173041	NA	synonymous SNV	ENSG00000173041:ENST00000309683:exon4:c.T1569C:p.C523C	Score=265;Name=lod=16	NA	7q11.21	NA	NA	NA	NA	rs10243954	0.69	0.69	0.689	0.682308	0.5964	0.6379	0.6657	0.8646	0.5818	0.61	0.66	0.67	0.85	0.6233	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.298798	NA	NA	0.610633	0.829923	ID=COSM1131541;OCCURENCE=1(prostate)	0.638	NA	4.8363336
1168	5	95234377	95234377	C	T	exonic	ELL2	NA	synonymous SNV	ELL2:NM_012081:exon8:c.G1092A:p.P364P	exonic	ENSG00000118985	NA	synonymous SNV	ENSG00000118985:ENST00000237853:exon8:c.G1092A:p.P364P	NA	NA	5q15	NA	NA	NA	NA	rs3777203	0.36	0.36	0.29	0.364617	0.2803	0.4325	0.245	0.4531	0.3466	0.29	0.43	0.24	0.45	0.2904	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.689589	NA	NA	0.259651	0.418219	NA	0.399	NA	4.8363156
1168	1	228464100	228464100	G	A	intronic	OBSCN	NA	NA	NA	intronic	ENSG00000154358	NA	NA	NA	NA	NA	1q42.13	NA	Name=ZNF263	NA	NA	rs936884	0.2	0.2	0.186	0.207069	0.164	0.1548	0.2536	0.3222	0.1166	0.17	0.15	0.25	0.28	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.212776	NA	NA	NA	NA	NA	0.109	NA	4.836
1168	2	89319556	89319556	C	T	intergenic	MIR4436A,NONE	dist=207588;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000253278	NA	NA	NA	Score=521;Name=lod=175	NA	2p11.2	NA	NA	NA	NA	rs11679378	0.39	0.39	0.283	0.358826	0.164	0.4117	0.3256	0.5053	0.3303	0.23	0.48	0.34	0.55	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.052558	NA	NA	NA	NA	NA	0.312	NA	4.836
1168	7	63230820	63230820	C	T	intergenic	MIR4283-1,LOC100506050	dist=149273;dist=253976	NA	NA	ncRNA_exonic	ENSG00000271466	NA	NA	NA	Score=689;Name=lod=843	NA	7q11.21	NA	NA	NA	NA	rs62474973	0.13	0.13	0.09	0.145367	0.164	0.1319	0.1556	0.0825	0.2178	0.15	0.13	0.14	0.08	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.067263	NA	NA	NA	NA	NA	NA	NA	4.836
1168	8	28157401	28157401	C	T	intergenic	ELP3,PNOC	dist=108732;dist=17248	NA	NA	ncRNA_exonic	ENSG00000239198	NA	NA	NA	Score=797;Name=lod=2307	NA	8p21.1	NA	NA	NA	NA	rs2614063	0.15	0.15	0.143	0.14976	0.164	0.1657	0.1153	0.1301	0.1697	0.16	0.17	0.13	0.11	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.469732	NA	NA	NA	NA	NA	0.109	NA	4.836
1168	12	92924899	92924899	C	T	intergenic	CLLU1,C12orf74	dist=100169;dist=171720	NA	NA	ncRNA_exonic	ENSG00000258262	NA	NA	NA	Score=429;Name=lod=74	NA	12q22	NA	NA	NA	NA	rs10859333	0.2	0.2	0.2	0.185903	0.164	0.4018	0.1614	0.0265	0.2188	0.16	0.41	0.17	0.04	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.429026	1.429026	NA	NA	NA	NA	0.116	NA	4.836
1168	6	169640732	169640732	A	C	intronic	THBS2	NA	NA	NA	intronic	ENSG00000186340	NA	NA	NA	NA	NA	6q27	NA	NA	Name=39	NA	rs13192849	0.16	0.16	0.165	0.175719	0.0398	0.1925	0.1196	0.3933	0.044	0.04	0.16	0.1	0.37	0.0857	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.105675	NA	NA	0.038837	0.341807	NA	0.116	NA	4.835663
1168	17	39118553	39118553	C	T	intronic	KRT39	NA	NA	NA	ncRNA_intronic	ENSG00000234477	NA	NA	NA	NA	NA	17q21.2	NA	Name=MafK_(ab50322),MafK_(SC-477),MafF_(M8194)	NA	NA	rs4890151	0.2	0.2	0.208	0.225639	0.161	0.0327	0.1801	0.4569	0.2106	0.16	0.04	0.17	0.46	0.1784	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.738305	NA	NA	0.158403	0.413073	NA	0.225	NA	4.8355303
1168	12	1866799	1866799	C	A	intronic	ADIPOR2	NA	NA	NA	ncRNA_exonic	ENSG00000243663	NA	NA	NA	Score=801;Name=lod=2399	NA	12p13.33	NA	NA	NA	NA	rs2108642	0.59	0.59	0.584	0.608027	0.498	0.5962	0.6412	0.7103	0.5716	0.48	0.59	0.63	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.080641	NA	NA	NA	NA	NA	0.514	NA	4.8353333
1168	20	17474791	17474791	G	A	exonic	BFSP1	NA	synonymous SNV	BFSP1:NM_001161705:exon8:c.C1551T:p.T517T,BFSP1:NM_001195:exon8:c.C1926T:p.T642T	exonic	ENSG00000125864	NA	synonymous SNV	ENSG00000125864:ENST00000377868:exon8:c.C1551T:p.T517T,ENSG00000125864:ENST00000377873:exon8:c.C1926T:p.T642T,ENSG00000125864:ENST00000544874:exon9:c.C1509T:p.T503T,ENSG00000125864:ENST00000536626:exon10:c.C1509T:p.T503T	NA	NA	20p12.1	NA	NA	NA	NA	rs6080717	0.2	0.2	0.211	0.205871	0.2962	0.0665	0.2205	0.2315	0.2117	0.29	0.05	0.25	0.22	0.2463	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.173413	NA	NA	0.288837	0.252383	ID=COSM149146;OCCURENCE=1(stomach)	0.283	NA	4.8353296
1168	2	225265645	225265645	G	A	intronic	FAM124B	NA	NA	NA	intronic	ENSG00000124019	NA	NA	NA	NA	NA	2q36.2	NA	Name=GATA-1	NA	NA	rs13010329	0.18	0.18	0.171	0.182907	0.165	0.2609	0.2363	0.0703	0.2352	0.16	0.27	0.25	0.07	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.205398	NA	NA	NA	NA	NA	0.138	NA	4.835
1168	8	95792447	95792447	A	C	intronic	DPY19L4	NA	NA	NA	intronic	ENSG00000156162	NA	NA	NA	Score=265;Name=lod=16	NA	8q22.1	NA	NA	NA	NA	rs12056667	0.14	0.14	0.121	0.157348	0.165	0.1706	0.2133	0.0688	0.2157	0.16	0.17	0.16	0.05	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.241189	1.241189	NA	NA	NA	NA	0.072	NA	4.835
1168	19	5776063	5776063	C	T	intronic	CATSPERD	NA	NA	NA	intronic	ENSG00000174898	NA	NA	NA	NA	NA	19p13.3	NA	Name=GATA3_(SC-268)	NA	NA	rs10417703	0.26	0.26	0.215	0.275559	0.165	0.5486	0.1787	0.1952	0.2853	0.17	0.5	0.19	0.19	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.120806	NA	NA	NA	NA	NA	0.232	NA	4.835
1169	16	81209207	81209207	T	C	intronic	PKD1L2	NA	NA	NA	intronic	ENSG00000166473,ENSG00000269323	NA	NA	NA	NA	NA	16q23.2	NA	Name=MafF_(M8194),MafK_(SC-477),p300,JunD,MafK_(ab50322)	Name=85	NA	rs2317114	0.52	0.52	0.499	0.551917	0.3489	0.752	0.5231	0.5212	0.6166	0.36	0.76	0.49	0.52	0.4556	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.77307	NA	NA	0.360618	0.476214	NA	0.623	NA	4.834882
1169	15	34634139	34634139	T	C	UTR3	NOP10	NM_018648:c.*30A>G	NA	NA	UTR3	ENSG00000182117	ENST00000328848:c.*30A>G,ENST00000557912:c.*56A>G	NA	NA	NA	NA	15q14	NA	Name=BRF2	NA	NA	rs1045194	0.18	0.18	0.186	0.210064	0.169	0.3353	0.1974	0.1354	0.2331	0.14	0.3	0.15	0.11	0.1784	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.206089	NA	NA	0.151117	0.14289	ID=COSN164889;OCCURENCE=1(breast)	0.007	NA	4.8348164
1169	1	214656526	214656526	T	C	intronic	PTPN14	NA	NA	NA	ncRNA_exonic	ENSG00000213036	NA	NA	NA	Score=715;Name=lod=1073	NA	1q41	NA	NA	NA	NA	rs80102871	NA	NA	NA	0.496605	0.499	0.4871	0.4957	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.775276	NA	NA	NA	NA	NA	NA	NA	4.8343333
1169	1	214656527	214656527	G	A	intronic	PTPN14	NA	NA	NA	ncRNA_exonic	ENSG00000213036	NA	NA	NA	Score=715;Name=lod=1073	NA	1q41	NA	NA	NA	NA	rs75133125	NA	NA	NA	0.496605	0.499	0.4871	0.4957	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.04139	NA	NA	NA	NA	NA	NA	NA	4.8343333
1169	5	78596044	78596044	T	C	exonic	JMY	NA	synonymous SNV	JMY:NM_152405:exon5:c.T1596C:p.D532D	exonic	ENSG00000152409	NA	synonymous SNV	ENSG00000152409:ENST00000396137:exon5:c.T1596C:p.D532D	Score=655;Name=lod=615	NA	5q14.1	NA	NA	NA	NA	rs10514159	0.68	0.68	0.712	0.679712	0.6163	0.6319	0.585	0.9372	0.5133	0.62	0.63	0.55	0.94	0.603	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.350754	1.350754	NA	0.61329	0.884615	NA	0.659	NA	4.8340766
1169	1	24671287	24671287	C	T	intronic	GRHL3	NA	NA	NA	intronic	ENSG00000158055	NA	NA	NA	NA	NA	1p36.11	NA	NA	Name=8	NA	rs4648859	0.25	0.25	0.26	0.282748	0.166	0.0337	0.2075	0.6604	0.2025	0.18	0.02	0.21	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.164087	NA	NA	NA	NA	NA	0.275	NA	4.834
1169	5	23304111	23304111	C	T	intergenic	CDH12,PRDM9	dist=450380;dist=203613	NA	NA	ncRNA_exonic	ENSG00000250332	NA	NA	NA	Score=589;Name=lod=329	NA	5p14.2	NA	NA	NA	NA	rs16892375	0.14	0.14	0.113	0.210863	0.166	0.125	0.2161	0.1566	0.4151	0.13	0.11	0.19	0.14	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00019	NA	NA	NA	NA	NA	0.138	NA	4.834
1169	5	23304235	23304235	T	C	intergenic	CDH12,PRDM9	dist=450504;dist=203489	NA	NA	ncRNA_exonic	ENSG00000250332	NA	NA	NA	Score=589;Name=lod=329	NA	5p14.2	NA	NA	NA	NA	rs6874000	0.15	0.15	0.14	0.222045	0.166	0.125	0.2205	0.1967	0.4151	0.14	0.11	0.2	0.18	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.526147	NA	NA	NA	NA	NA	0.145	NA	4.834
1169	5	23304261	23304261	G	A	intergenic	CDH12,PRDM9	dist=450530;dist=203463	NA	NA	ncRNA_exonic	ENSG00000250332	NA	NA	NA	Score=589;Name=lod=329	NA	5p14.2	NA	NA	NA	NA	rs6887969	0.14	0.14	0.124	0.210663	0.166	0.125	0.2161	0.1558	0.4151	0.13	0.11	0.2	0.14	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.114546	NA	NA	NA	NA	NA	0.08	NA	4.834
1169	5	23304368	23304368	A	C	intergenic	CDH12,PRDM9	dist=450637;dist=203356	NA	NA	ncRNA_exonic	ENSG00000250332	NA	NA	NA	Score=663;Name=lod=658	NA	5p14.2	NA	NA	NA	NA	rs13152937	0.14	0.14	0.114	0.210663	0.166	0.125	0.2161	0.1558	0.4151	0.13	0.11	0.19	0.13	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.636772	NA	NA	NA	NA	NA	0.138	NA	4.834
1169	5	23304401	23304401	G	T	intergenic	CDH12,PRDM9	dist=450670;dist=203323	NA	NA	ncRNA_exonic	ENSG00000250332	NA	NA	NA	Score=663;Name=lod=658	NA	5p14.2	NA	NA	NA	NA	rs6888168	0.14	0.14	0.122	0.210663	0.166	0.125	0.2161	0.1558	0.4151	0.14	0.11	0.19	0.14	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.133413	NA	NA	NA	NA	NA	0.138	NA	4.834
1169	5	23304501	23304501	C	T	intergenic	CDH12,PRDM9	dist=450770;dist=203223	NA	NA	ncRNA_exonic	ENSG00000250332	NA	NA	NA	Score=663;Name=lod=658	NA	5p14.2	NA	NA	NA	NA	rs6889624	0.14	0.14	0.115	0.210863	0.166	0.125	0.2161	0.1558	0.4162	0.14	0.11	0.19	0.14	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.017527	NA	NA	NA	NA	NA	0.138	NA	4.834
1169	5	23304559	23304559	C	T	intergenic	CDH12,PRDM9	dist=450828;dist=203165	NA	NA	ncRNA_exonic	ENSG00000250332	NA	NA	NA	Score=663;Name=lod=658	NA	5p14.2	NA	NA	NA	NA	rs6889753	0.14	0.14	0.114	0.211062	0.166	0.125	0.2176	0.1566	0.4151	0.14	0.11	0.19	0.14	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.179785	NA	NA	NA	NA	NA	0.138	NA	4.834
1169	5	23304587	23304587	A	C	intergenic	CDH12,PRDM9	dist=450856;dist=203137	NA	NA	ncRNA_exonic	ENSG00000250332	NA	NA	NA	Score=608;Name=lod=394	NA	5p14.2	NA	NA	NA	NA	rs6870220	0.14	0.14	0.121	0.211062	0.166	0.125	0.2161	0.1566	0.4162	0.14	0.11	0.19	0.14	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.311878	NA	NA	NA	NA	NA	0.138	NA	4.834
1169	5	23304911	23304911	G	A	intergenic	CDH12,PRDM9	dist=451180;dist=202813	NA	NA	ncRNA_exonic	ENSG00000250332	NA	NA	NA	Score=721;Name=lod=1130	NA	5p14.2	NA	NA	NA	NA	rs16899396	0.14	0.14	0.122	0.210663	0.166	0.125	0.2161	0.1558	0.4151	0.14	0.11	0.19	0.14	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.171897	NA	NA	NA	NA	NA	0.138	NA	4.834
1169	15	31214649	31214649	A	G	intronic	FAN1	NA	NA	NA	intronic	ENSG00000198690	NA	NA	NA	NA	NA	15q13.3	NA	Name=SP1	NA	NA	rs1474382	0.2	0.2	0.186	0.217652	0.166	0.1567	0.2622	0.2973	0.1943	0.15	0.12	0.25	0.32	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.533275	1.533275	NA	NA	NA	NA	0.152	NA	4.834
1169	15	66857290	66857290	C	T	intronic	LCTL	NA	NA	NA	intronic	ENSG00000188501	NA	NA	NA	NA	NA	15q22.31	NA	NA	Name=6	NA	rs7403574	0.2	0.2	0.2	0.189497	0.166	0.129	0.2565	0.2579	0.136	0.18	0.13	0.24	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.363725	NA	NA	NA	NA	NA	0.268	NA	4.834
1169	20	29874301	29874301	T	C	intergenic	DEFB115,DEFB116	dist=26866;dist=16714	NA	NA	ncRNA_exonic	ENSG00000224628	NA	NA	NA	Score=681;Name=lod=782	NA	20q11.21	NA	NA	NA	NA	rs55995696	0.09	0.09	0.081	0.0698882	0.166	NA	0.1052	0.0469	0.0491	0.18	NA	0.11	0.06	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.643821	NA	NA	NA	NA	NA	0.123	NA	4.834
1169	1	144860026	144860026	G	C	intronic	NBPF9,PDE4DIP	NA	NA	NA	ncRNA_intronic	ENSG00000255148	NA	NA	NA	NA	NA	1q21.1	NA	Name=CTCF,Rad21,CTCF_(C-20),CTCF_(SC-5916),SMC3_(ab9263),NANOG_(SC-33759)	NA	NA	rs1699819	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.4999	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.533367	NA	NA	NA	NA	NA	0.5	NA	4.8334333
1169	4	86738	86738	A	G	exonic	ZNF595	NA	unknown	UNKNOWN	ncRNA_exonic	ENSG00000255436	NA	NA	NA	Score=369;Name=lod=42	NA	4p16.3	NA	Name=ZNF274,SETDB1,KAP1	NA	NA	rs2353625	1	1	1	1	1	1	1	1	1	1	1	1	1	0.9999	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.530604	NA	NA	NA	NA	NA	1	NA	4.8334333
1169	14	106926714	106926714	C	T	intergenic	LINC00226,LINC00221	dist=181748;dist=11741	NA	NA	UTR5	ENSG00000232216	ENST00000434710:c.-70G>A	NA	NA	Score=243;Name=lod=13	NA	14q32.33	NA	NA	NA	NA	rs2467909	0.27	0.27	0.223	NA	NA	NA	NA	NA	NA	0.27	0.17	0.22	0.42	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.806539	2.806539	NA	NA	NA	NA	0.21	NA	4.8333334
1169	2	80801524	80801524	T	C	intronic	CTNNA2	NA	NA	NA	intronic	ENSG00000066032	NA	NA	NA	NA	NA	2p12	NA	NA	Name=4	NA	rs2276661	0.14	0.14	0.141	0.157947	0.167	0.1369	0.1383	0.1225	0.2321	0.16	0.13	0.14	0.12	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.631207	NA	NA	NA	NA	NA	0.123	NA	4.833
1169	4	73673467	73673467	G	C	intergenic	ADAMTS3,COX18	dist=238951;dist=246949	NA	NA	ncRNA_exonic	ENSG00000270665	NA	NA	NA	Score=581;Name=lod=307	NA	4q13.3	NA	NA	NA	NA	rs62313413	0.18	0.18	0.158	0.16254	0.167	0.2758	0.1556	0.0567	0.1892	0.18	0.29	0.21	0.04	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.008663	NA	NA	NA	NA	NA	0.123	NA	4.833
1169	6	124604055	124604055	G	T	intronic	NKAIN2	NA	NA	NA	intronic	ENSG00000188580	NA	NA	NA	NA	NA	6q22.31	Score=735;Name=V$MEF2_04	NA	NA	NA	rs41284440	0.18	0.18	0.194	0.169728	0.167	0.1845	0.1225	0.2216	0.1207	0.15	0.2	0.13	0.24	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.677984	3.677984	NA	NA	NA	NA	0.167	NA	4.833
1169	10	43191254	43191254	C	G	intergenic	ZNF33B,BMS1	dist=57262;dist=86700	NA	NA	ncRNA_exonic	ENSG00000231009	NA	NA	NA	Score=403;Name=lod=58	NA	10q11.21	NA	NA	NA	NA	rs7088389	0.19	0.19	0.186	0.224641	0.167	0.0357	0.219	0.3956	0.2515	0.16	0.03	0.22	0.4	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.166701	NA	NA	NA	NA	NA	0.167	NA	4.833
1169	14	95192825	95192825	T	C	intergenic	SERPINA13P,GSC	dist=79494;dist=41735	NA	NA	ncRNA_exonic	ENSG00000239269	NA	NA	NA	Score=800;Name=lod=2376	NA	14q32.13	NA	NA	NA	NA	rs17113898	0.12	0.12	0.102	0.144968	0.167	0.0536	0.0908	0.1732	0.2168	0.14	0.06	0.1	0.18	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.042632	NA	NA	NA	NA	NA	0.174	NA	4.833
1169	17	51512293	51512293	G	C	intergenic	C17orf112,KIF2B	dist=447281;dist=387946	NA	NA	ncRNA_exonic	ENSG00000262271	NA	NA	NA	Score=673;Name=lod=726	NA	17q22	NA	NA	NA	NA	rs11653759	0.15	0.15	0.122	0.120407	0.167	0.1111	0.2219	0.0764	0.0695	0.16	0.15	0.24	0.07	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.792322	NA	NA	NA	NA	NA	0.109	NA	4.833
1169	16	1260528	1260528	C	T	intronic	CACNA1H	NA	NA	NA	intronic	ENSG00000196557	NA	NA	NA	NA	NA	16p13.3	NA	Name=USF-1	NA	NA	rs111903030	0.02	0.02	0.025	0.0305511	0.0527	NA	0.0288	NA	0.0818	0.06	NA	0.03	NA	0.0528	0.062	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.617041	NA	NA	0.062057	0.009845	NA	NA	NA	4.832443
1169	19	4153659	4153659	G	A	UTR5	CREB3L3	NM_001271995:c.-86G>A,NM_032607:c.-86G>A,NM_001271997:c.-86G>A,NM_001271996:c.-86G>A	NA	NA	UTR5	ENSG00000060566	ENST00000078445:c.-86G>A,ENST00000252587:c.-1237G>A,ENST00000595923:c.-86G>A	NA	NA	NA	NA	19p13.3	NA	Name=c-Fos,GATA-2,Pbx3,IRF1,HEY1,IRF3,SP1,Pol2,SP2_(SC-643),NF-YA,TAF1,NF-YB	Name=100	NA	rs350879	0.85	0.85	0.857	0.868211	0.7505	0.9196	0.8213	0.9758	0.8241	0.74	0.91	0.81	0.96	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.391795	NA	NA	0.750786	0.941474	NA	0.812	NA	4.8320474
1169	3	186980264	186980264	C	T	intronic	MASP1	NA	NA	NA	intronic	ENSG00000127241	NA	NA	NA	NA	NA	3q27.3	NA	NA	Name=4	NA	rs710468	0.23	0.23	0.228	0.28095	0.168	0.1776	0.1888	0.5144	0.2536	0.17	0.15	0.2	0.45	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.654052	NA	NA	NA	NA	NA	0.254	NA	4.832
1169	9	79164646	79164646	G	A	intergenic	GCNT1,PRUNE2	dist=42314;dist=61646	NA	NA	ncRNA_exonic	ENSG00000219149	NA	NA	NA	Score=371;Name=lod=43	NA	9q21.13	NA	NA	NA	NA	rs13290974	0.21	0.21	0.195	0.225439	0.168	0.1637	0.3487	0.2708	0.1994	0.18	0.16	0.3	0.25	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.110475	NA	NA	NA	NA	NA	0.232	NA	4.832
1169	16	84449024	84449024	G	A	intronic	ATP2C2	NA	NA	NA	intronic	ENSG00000064270	NA	NA	NA	NA	NA	16q24.1	NA	Name=STAT1	NA	NA	rs3743649	0.14	0.14	0.12	0.153355	0.168	0.0248	0.2075	0.1467	0.2413	0.17	0.03	0.22	0.17	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.070641	NA	NA	NA	NA	NA	0.225	NA	4.832
1169	17	7804405	7804405	G	C	intronic	CHD3	NA	NA	NA	intronic	ENSG00000170004	NA	NA	NA	NA	NA	17p13.1	Score=929;Name=V$PAX4_03	NA	NA	NA	rs62062524	0.24	0.24	0.209	0.241014	0.168	0.4395	0.353	0.0772	0.2536	0.17	0.41	0.31	0.09	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.590765	NA	NA	NA	NA	NA	0.123	NA	4.832
1169	19	16013416	16013416	T	C	intergenic	CYP4F2,CYP4F11	dist=4532;dist=9764	NA	NA	ncRNA_exonic	ENSG00000267218	NA	NA	NA	Score=745;Name=lod=1424	NA	19p13.12	NA	NA	NA	NA	rs113262110	0.14	0.14	0.13	0.208666	0.168	0.1567	0.1571	0.2413	0.2965	0.15	0.12	0.14	0.17	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.310633	NA	NA	NA	NA	NA	0.08	NA	4.832
1169	19	16013815	16013815	G	A	intergenic	CYP4F2,CYP4F11	dist=4931;dist=9365	NA	NA	ncRNA_exonic	ENSG00000267218	NA	NA	NA	Score=745;Name=lod=1424	NA	19p13.12	NA	NA	NA	NA	rs8104015	0.17	0.17	0.157	0.204872	0.168	0.1567	0.1571	0.2269	0.2965	0.17	0.13	0.17	0.23	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.568857	NA	NA	NA	NA	NA	0.087	NA	4.832
1169	14	94007075	94007075	C	T	exonic	UNC79	NA	synonymous SNV	UNC79:NM_020818:exon13:c.C891T:p.G297G	exonic	ENSG00000133958	NA	synonymous SNV	ENSG00000133958:ENST00000256339:exon13:c.C891T:p.G297G,ENSG00000133958:ENST00000393151:exon13:c.C1422T:p.G474G,ENSG00000133958:ENST00000553484:exon13:c.C1422T:p.G474G,ENSG00000133958:ENST00000555664:exon13:c.C1422T:p.G474G	Score=478;Name=lod=117	NA	14q32.12	NA	NA	NA	NA	rs1951716	0.5	0.5	0.473	0.485224	0.6193	0.2113	0.7147	0.4652	0.4939	0.61	0.21	0.73	0.51	0.5774	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.424846	1.424846	NA	0.638488	0.492056	NA	0.522	NA	4.8314786
1169	17	9066098	9066098	C	T	intronic	NTN1	NA	NA	NA	intronic	ENSG00000065320	NA	NA	NA	NA	NA	17p13.1	NA	Name=CTCF_(SC-5916),CTCF,Rad21	Name=9	NA	rs2286510	0.35	0.35	0.329	0.332268	0.4056	0.3482	0.3703	0.2821	0.2812	0.41	0.32	0.36	0.27	0.371	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.008701	NA	NA	0.391952	0.305821	NA	0.312	NA	4.831448
1169	1	57004147	57004147	G	A	intronic	PPAP2B	NA	NA	NA	ncRNA_exonic	ENSG00000236776	NA	NA	NA	Score=536;Name=lod=201	NA	1p32.2	NA	NA	NA	NA	rs1777274	0.44	0.44	0.439	0.487021	0.502	0.2669	0.4928	0.6097	0.5286	0.5	0.26	0.44	0.57	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.629725	NA	NA	NA	NA	NA	0.5	NA	4.8313333
1169	1	57004178	57004178	G	T	intronic	PPAP2B	NA	NA	NA	ncRNA_exonic	ENSG00000236776	NA	NA	NA	Score=536;Name=lod=201	NA	1p32.2	NA	NA	NA	NA	rs1759750	0.44	0.44	0.436	0.487021	0.502	0.2669	0.4928	0.6097	0.5286	0.5	0.26	0.44	0.57	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.285693	NA	NA	NA	NA	NA	0.493	NA	4.8313333
1169	20	31760708	31760708	G	A	intronic	BPIFA2	NA	NA	NA	intronic	ENSG00000131050	NA	NA	NA	NA	NA	20q11.21	NA	NA	Name=3	NA	rs6579083	0.2	0.2	0.23	0.218251	0.0487	0.0556	0.0764	0.6982	0.0123	0.05	0.06	0.07	0.68	0.0845	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.186957	NA	NA	0.035581	0.573309	NA	0.196	NA	4.831219
1169	3	97660084	97660084	C	T	exonic	CRYBG3	NA	synonymous SNV	CRYBG3:NM_153605:exon20:c.C8598T:p.C2866C	exonic	ENSG00000080200	NA	synonymous SNV	ENSG00000080200:ENST00000495403:exon4:c.C372T:p.C124C,ENSG00000080200:ENST00000389622:exon5:c.C375T:p.C125C,ENSG00000080200:ENST00000182096:exon17:c.C2754T:p.C918C	NA	NA	3q11.2	NA	NA	NA	NA	rs11544446	0.21	0.21	0.17	0.201278	0.2823	0.1528	0.3098	0.112	0.2117	0.29	0.13	0.33	0.11	0.2696	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.449808	NA	NA	0.283695	0.123936	NA	0.254	NA	4.8310716
1169	8	124027628	124027628	T	C	UTR3	DERL1	NM_024295:c.*59A>G,NM_001134671:c.*59A>G	NA	NA	ncRNA_UTR3	ENSG00000136986	NA	NA	NA	NA	NA	8q24.13	NA	Name=Pol2	NA	NA	rs7159	0.63	0.63	0.592	0.634185	0.669	0.7014	0.6542	0.497	0.7004	0.68	0.68	0.65	0.49	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.68926	NA	NA	NA	NA	NA	0.681	NA	4.831
1169	14	31260686	31260686	A	G	intergenic	SCFD1,COCH	dist=55653;dist=83055	NA	NA	ncRNA_exonic	ENSG00000243855	NA	NA	NA	Score=694;Name=lod=878	NA	14q12	NA	NA	NA	NA	rs17438210	0.08	0.08	0.062	0.0609026	0.169	0.001	0.085	0.0083	0.0654	0.17	NA	0.1	0.02	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.247427	NA	NA	NA	NA	NA	0.145	NA	4.831
1169	19	16013658	16013658	A	G	intergenic	CYP4F2,CYP4F11	dist=4774;dist=9522	NA	NA	ncRNA_exonic	ENSG00000267218	NA	NA	NA	Score=745;Name=lod=1424	NA	19p13.12	NA	NA	NA	NA	rs16980921	0.18	0.18	0.145	0.209065	0.169	0.1567	0.1585	0.2413	0.2965	0.17	0.13	0.17	0.24	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.003947	NA	NA	NA	NA	NA	0.094	NA	4.831
1169	20	29929497	29929497	C	T	intergenic	DEFB116,DEFB118	dist=33109;dist=26924	NA	NA	ncRNA_exonic	ENSG00000236121	NA	NA	NA	NA	NA	20q11.21	NA	Name=TAL1_(SC-12984)	NA	NA	rs17326630	0.09	0.09	0.067	0.0702875	0.169	NA	0.1081	0.0446	0.0491	0.18	NA	0.11	0.06	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.108367	NA	NA	NA	NA	NA	0.109	NA	4.831
1169	19	19653524	19653524	G	A	intronic	CILP2	NA	NA	NA	intronic	ENSG00000160161	NA	NA	NA	NA	NA	19p13.11	NA	NA	Name=5	NA	rs34067609	0.12	0.12	NA	0.11901	0.169	NA	0.1167	0.1634	0.1319	0.15	NA	0.14	0.2	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.929572	NA	NA	NA	NA	NA	NA	NA	4.831
1169	19	10403947	10403947	T	C	intronic	ICAM5	NA	NA	NA	intronic	ENSG00000105376	NA	NA	NA	NA	NA	19p13.2	NA	Name=SUZ12	Name=5	NA	rs2569702	0.3	0.3	0.263	0.303315	0.4095	0.247	0.5202	0.0439	0.4489	0.41	0.26	0.48	0.02	0.3831	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.491165	1.491165	NA	0.376464	0.096463	NA	0.304	NA	4.830936
1169	3	184094183	184094183	A	G	UTR5	THPO	NM_001177598:c.-136T>C,NM_001177597:c.-136T>C,NM_000460:c.-136T>C	NA	NA	UTR5	ENSG00000090534	ENST00000204615:c.-136T>C,ENST00000445696:c.-136T>C	NA	NA	Score=272;Name=lod=17	NA	3q27.1	NA	NA	NA	NA	rs956732	0.52	0.52	0.502	0.506789	0.503	0.3919	0.6354	0.6142	0.3926	0.48	0.44	0.61	0.59	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.111521	NA	NA	NA	NA	NA	0.645	NA	4.8303334
1169	5	43495684	43495684	C	T	intronic	C5orf34	NA	NA	NA	ncRNA_exonic	ENSG00000249855	NA	NA	NA	Score=860;Name=lod=4171	NA	5p12	NA	NA	NA	NA	rs10066408	0.4	0.4	0.374	0.401757	0.503	0.0893	0.3818	0.6263	0.3303	0.48	0.09	0.43	0.63	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.320265	NA	NA	NA	NA	NA	0.442	NA	4.8303333
1169	5	43495924	43495924	C	A	intronic	C5orf34	NA	NA	NA	ncRNA_exonic	ENSG00000249855	NA	NA	NA	Score=860;Name=lod=4171	NA	5p12	NA	NA	NA	NA	rs10068064	0.4	0.4	0.404	0.401957	0.503	0.0893	0.3818	0.6271	0.3303	0.48	0.09	0.43	0.63	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.24766	NA	NA	NA	NA	NA	0.536	NA	4.8303333
1169	7	45139919	45139919	A	C	UTR3	TBRG4	NM_199122:c.*5T>G,NM_004749:c.*5T>G,NM_030900:c.*5T>G,NM_001261834:c.*5T>G	NA	NA	UTR3	ENSG00000136270	ENST00000395655:c.*5T>G,ENST00000361278:c.*5T>G,ENST00000258770:c.*5T>G,ENST00000494076:c.*5T>G	NA	NA	NA	NA	7p13	NA	Name=USF-1	NA	NA	rs2289373	0.12	0.12	0.121	0.115216	0.167	0.1538	0.1643	0.0174	0.1196	0.16	0.14	0.18	0.02	0.1519	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.541579	NA	NA	0.184419	0.041307	NA	0.087	NA	4.8300144
1169	1	152372035	152372035	A	G	intergenic	FLG2,CRNN	dist=39553;dist=9684	NA	NA	ncRNA_intronic	ENSG00000227415	NA	NA	NA	NA	NA	1q21.3	NA	Name=CTCF	NA	NA	rs7515448	0.39	0.39	0.377	0.432508	0.17	0.496	0.451	0.6437	0.3384	0.17	0.5	0.38	0.62	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.18211	NA	NA	NA	NA	NA	0.384	NA	4.83
1169	2	62030301	62030301	C	T	intergenic	XPO1,FAM161A	dist=264883;dist=21682	NA	NA	ncRNA_exonic	ENSG00000227361	NA	NA	NA	Score=717;Name=lod=1093	NA	2p15	NA	NA	NA	NA	rs12472964	0.15	0.15	0.146	0.147764	0.17	0.1558	0.1916	0.1006	0.1493	0.17	0.15	0.19	0.1	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.14503	NA	NA	NA	NA	NA	0.138	NA	4.83
1169	4	73673271	73673271	A	T	intergenic	ADAMTS3,COX18	dist=238755;dist=247145	NA	NA	ncRNA_exonic	ENSG00000270665	NA	NA	NA	Score=674;Name=lod=729	NA	4q13.3	NA	NA	NA	NA	rs62313412	0.21	0.21	0.192	0.195088	0.17	0.2768	0.1686	0.1702	0.1892	0.18	0.28	0.21	0.15	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.215582	NA	NA	NA	NA	NA	0.159	NA	4.83
1169	4	188892065	188892065	C	T	intergenic	LOC339975,ZFP42	dist=465298;dist=24860	NA	NA	ncRNA_exonic	ENSG00000213331	NA	NA	NA	Score=374;Name=lod=44	NA	4q35.2	NA	NA	NA	NA	rs60778059	0.26	0.26	0.224	0.301118	0.17	0.3919	0.2853	0.239	0.4376	0.17	0.42	0.26	0.22	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.750525	NA	NA	NA	NA	NA	0.181	NA	4.83
1169	6	32546940	32546940	C	T	intronic	HLA-DRB1	NA	NA	NA	intronic	ENSG00000196126	NA	NA	NA	NA	NA	6p21.32	NA	Name=Pol2-4H8	NA	NA	rs72847691	NA	NA	0.085	0.0826677	0.17	0.0288	0.134	0.0666	0.0337	NA	NA	NA	NA	NA	0.098	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.392844	NA	NA	NA	NA	NA	0.145	NA	4.83
1169	8	68318876	68318876	A	G	intergenic	ARFGEF1,CPA6	dist=62964;dist=15529	NA	NA	ncRNA_exonic	ENSG00000241961	NA	NA	NA	Score=595;Name=lod=348	NA	8q13.2	NA	NA	NA	NA	rs7821886	0.12	0.12	0.11	0.134185	0.17	0.0258	0.1398	0.1694	0.1575	0.17	0.02	0.13	0.16	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.170688	NA	NA	NA	NA	NA	0.138	NA	4.83
1169	11	117780744	117780744	C	T	intronic	TMPRSS13	NA	NA	NA	intronic	ENSG00000137747	NA	NA	NA	NA	NA	11q23.3	NA	Name=GATA-2,ZNF263,CCNT2,Pol2,eGFP-JunD,E2F6,CTCF	NA	NA	rs12801855	0.09	0.09	0.074	0.0730831	0.17	0.005	0.0951	0.0151	0.1063	0.18	NA	0.15	0.03	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.607112	NA	NA	NA	NA	NA	0.116	NA	4.83
1169	19	55668819	55668819	A	G	intronic	TNNI3	NA	NA	NA	intronic	ENSG00000129991,ENSG00000267110	NA	NA	NA	NA	NA	19q13.42	NA	Name=PU.1	NA	NA	rs11667847	0.22	0.22	0.208	0.247204	0.17	0.2321	0.1311	0.3525	0.2822	0.17	0.22	0.14	0.36	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.102038	NA	NA	NA	NA	NA	0.217	NA	4.83
1169	19	49519466	49519466	A	G	exonic	LHB	NA	synonymous SNV	LHB:NM_000894:exon3:c.T285C:p.G95G	exonic	ENSG00000104826	NA	synonymous SNV	ENSG00000104826:ENST00000221421:exon3:c.T285C:p.G95G	NA	NA	19q13.33	NA	Name=Pol2	NA	NA	rs1056917	0.58	0.58	0.571	0.587061	0.6262	0.3383	0.6484	0.739	0.5542	0.63	0.34	0.62	0.73	0.6048	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.724494	NA	NA	0.60593	0.721516	NA	0.688	NA	4.8297366
1169	6	32548501	32548501	C	T	intronic	HLA-DRB1	NA	NA	NA	intronic	ENSG00000196126	NA	NA	NA	NA	NA	6p21.32	NA	Name=Pol2-4H8	NA	NA	rs3830131	NA	NA	0.054	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.1705	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.240792	NA	NA	NA	NA	NA	0.072	NA	4.8295
1169	11	5536415	5536415	C	T	exonic	UBQLNL	NA	synonymous SNV	UBQLNL:NM_145053:exon1:c.G1257A:p.E419E	exonic	ENSG00000175518	NA	synonymous SNV	ENSG00000175518:ENST00000380184:exon1:c.G1257A:p.E419E	NA	NA	11p15.4	NA	NA	NA	NA	rs10769023	0.31	0.31	0.287	0.288538	0.2614	0.371	0.3184	0.2458	0.2679	0.28	0.41	0.28	0.28	0.3031	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.211323	NA	NA	0.272865	0.253067	NA	0.283	NA	4.8293016
1169	11	125938163	125938163	C	T	intergenic	CDON,RPUSD4	dist=4976;dist=133826	NA	NA	ncRNA_exonic	ENSG00000254759	NA	NA	NA	Score=594;Name=lod=347	NA	11q24.2	NA	NA	NA	NA	rs535955	0.08	0.08	0.069	0.0830671	0.171	0.004	0.1441	0.0129	0.1258	0.16	0.01	0.15	0.01	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.831807	NA	NA	NA	NA	NA	0.058	NA	4.829
1169	13	35630064	35630064	A	G	intronic	NBEA	NA	NA	NA	intronic	ENSG00000172915	NA	NA	NA	NA	NA	13q13.3	NA	Name=MafK_(ab50322),MafF_(M8194),MafK_(SC-477)	NA	NA	rs9530108	0.08	0.08	0.073	0.0654952	0.171	0.001	0.0965	0.0106	0.0757	0.17	0.01	0.11	0.02	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.391294	NA	NA	NA	NA	NA	0.087	NA	4.829
1169	15	31090456	31090456	G	A	intergenic	LOC100288637,HERC2P10	dist=25247;dist=19783	NA	NA	ncRNA_exonic	ENSG00000103832	NA	NA	NA	Score=383;Name=lod=48	NA	15q13.2	NA	NA	NA	NA	rs12902714	0.13	0.13	0.128	0.145767	0.171	0.0188	0.1009	0.2277	0.1718	0.17	0.02	0.11	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.049625	NA	NA	NA	NA	NA	0.08	NA	4.829
1169	15	59694003	59694003	C	T	intergenic	MYO1E,FAM81A	dist=28932;dist=36369	NA	NA	ncRNA_exonic	ENSG00000259750	NA	NA	NA	Score=783;Name=lod=2020	NA	15q22.2	NA	NA	NA	NA	rs58617007	0.2	0.2	0.169	0.220647	0.171	0.3879	0.2075	0.1082	0.2607	0.18	0.32	0.19	0.09	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.063861	2.063861	NA	NA	NA	NA	0.159	NA	4.829
1169	15	79310337	79310337	A	G	intronic	RASGRF1	NA	NA	NA	intronic	ENSG00000058335	NA	NA	NA	NA	NA	15q25.1	NA	Name=NFKB	NA	NA	rs11855004	0.17	0.17	0.173	0.167532	0.171	0.1696	0.1167	0.2443	0.0941	0.17	0.16	0.13	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.19737	NA	NA	NA	NA	NA	0.138	NA	4.829
1169	19	51262056	51262056	T	C	intergenic	CLEC11A,GPR32	dist=33075;dist=11665	NA	NA	ncRNA_exonic	ENSG00000269565	NA	NA	NA	Score=528;Name=lod=186	NA	19q13.33	NA	NA	NA	NA	rs11883166	0.17	0.17	0.154	0.183307	0.171	0.005	0.1542	0.3646	0.1554	0.16	NA	0.18	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.485717	NA	NA	NA	NA	NA	0.261	NA	4.829
1169	6	29913266	29913266	G	T	UTR3	HLA-A	NM_001242758:c.*34G>T,NM_002116:c.*34G>T	NA	NA	UTR3	ENSG00000206503	ENST00000396634:c.*34G>T,ENST00000376806:c.*34G>T,ENST00000376809:c.*34G>T,ENST00000376802:c.*34G>T	NA	NA	NA	NA	6p22.1	NA	Name=Pol2-4H8	NA	NA	rs1061156	0.19	0.19	0.213	0.203275	0.16	0.1756	0.1671	0.2731	0.2076	0.15	0.19	0.19	0.27	0.1772	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.137752	NA	NA	0.16722	0.250827	NA	0.087	NA	4.8289134
1169	6	30890195	30890195	A	G	intronic	VARS2	NA	NA	NA	intronic	ENSG00000137411	NA	NA	NA	NA	NA	6p21.33	NA	NA	Name=15	NA	rs3890906	0.05	0.05	0.041	0.034345	0.0577	0.003	0.0375	0.056	0.0112	0.06	0.01	0.04	0.08	0.0522	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.816533	NA	NA	0.061669	0.04937	NA	0.007	NA	4.828431
1169	4	166325868	166325868	A	G	intronic	CPE	NA	NA	NA	ncRNA_exonic	ENSG00000251596	NA	NA	NA	Score=665;Name=lod=673	NA	4q32.3	NA	NA	NA	NA	rs2241812	0.55	0.55	0.559	0.582268	0.505	0.6438	0.4337	0.7534	0.4724	0.48	0.56	0.43	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.268398	2.268398	NA	NA	NA	NA	0.58	NA	4.8283333
1169	5	22580680	22580680	T	C	intronic	CDH12	NA	NA	NA	ncRNA_exonic	ENSG00000249206	NA	NA	NA	Score=503;Name=lod=147	NA	5p14.3	NA	NA	NA	NA	rs2652199	0.59	0.59	0.565	0.599641	0.505	0.7083	0.7248	0.5847	0.5164	0.5	0.71	0.68	0.54	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.658206	NA	NA	NA	NA	NA	0.529	NA	4.8283333
1169	10	102008169	102008169	C	G	intronic	CWF19L1	NA	NA	NA	ncRNA_exonic	ENSG00000230224	NA	NA	NA	Score=783;Name=lod=2026	NA	10q24.31	NA	NA	NA	NA	rs7079072	0.45	0.45	0.464	0.435104	0.505	0.2083	0.402	0.674	0.2975	0.51	0.22	0.46	0.63	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.446275	NA	NA	NA	NA	NA	0.428	NA	4.8283333
1169	16	84211483	84211483	C	T	UTR3	DNAAF1,TAF1C	NM_178452:c.*36C>T;NM_001243159:c.*1064G>A,NM_001243158:c.*1064G>A,NM_005679:c.*1064G>A,NM_001243157:c.*1064G>A,NM_001243156:c.*1064G>A,NM_139353:c.*1064G>A,NM_001243160:c.*1064G>A	NA	NA	UTR3	ENSG00000103168,ENSG00000154099	ENST00000341690:c.*1064G>A,ENST00000567759:c.*1064G>A,ENST00000541676:c.*1064G>A,ENST00000378541:c.*1064G>A,ENST00000566903:c.*1845G>A;ENST00000378553:c.*36C>T,ENST00000569735:c.*36C>T	NA	NA	NA	NA	16q24.1	NA	Name=c-Fos,Egr-1,c-Myc	Name=85	NA	rs8692	0.5	0.5	0.523	0.501797	0.495	0.5278	0.5086	0.4705	0.5194	0.49	0.55	0.47	0.46	0.5106	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.830963	NA	NA	0.499419	0.475455	ID=COSN165275;OCCURENCE=1(breast)	0.435	NA	4.8283144
1169	3	38539098	38539098	T	C	intronic	EXOG	NA	NA	NA	intronic	ENSG00000157036	NA	NA	NA	NA	NA	3p22.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.1719	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.446328	NA	NA	NA	NA	NA	NA	NA	4.8281
1169	15	31093529	31093529	C	T	intergenic	LOC100288637,HERC2P10	dist=28320;dist=16710	NA	NA	ncRNA_exonic	ENSG00000221379	NA	NA	NA	NA	NA	15q13.2	NA	Name=CTCF,Rad21,CTCF_(C-20),CTCF_(SC-5916)	NA	NA	rs35480234	0.19	0.19	0.14	0.217652	0.172	0.0288	0.1196	0.4788	0.1759	0.17	0.04	0.13	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.462648	NA	NA	NA	NA	NA	NA	NA	4.828
1169	7	100552094	100552094	G	C	intergenic	ACHE,MUC12	dist=58553;dist=60810	NA	NA	exonic	ENSG00000169894	NA	nonsynonymous SNV	ENSG00000169894:ENST00000319509:exon1:c.G845C:p.G282A	NA	NA	7q22.1	NA	NA	NA	NA	rs62483698	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5067	0.55	1	T	0.0	B	0.0	B	.	.	0.723	P	0	N	3.46	T	-0.952	T	0.000	T	0.026	-1.985	0.007	1.5	0.186	-0.133	7.630	-1.985211	NA	1	0.498744	0.554224	NA	0.478	NA	4.8278894
1169	11	64972354	64972354	A	T	intronic	CAPN1	NA	NA	NA	intronic	ENSG00000014216	NA	NA	NA	NA	NA	11q13.1	NA	Name=ZNF263,CTCF_(SC-5916),NANOG_(SC-33759),Egr-1,CTCF_(C-20),CTCFL_(SC-98982),Znf143_(16618-1-AP),SMC3_(ab9263),Rad21,CTCF	Name=83	NA	rs2271450	0.38	0.38	0.337	0.347444	0.4076	0.4365	0.4784	0.1838	0.3221	0.42	0.43	0.42	0.22	0.3846	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.49316	NA	NA	0.380514	0.209529	NA	0.42	NA	4.827286
1169	2	136655620	136655620	G	A	intergenic	MCM6,DARS	dist=21573;dist=8634	NA	NA	ncRNA_exonic	ENSG00000214070	NA	NA	NA	Score=696;Name=lod=897	NA	2q21.3	NA	NA	NA	NA	rs6430593	0.22	0.22	0.22	0.265775	0.173	0.1825	0.3573	0.2632	0.3855	0.16	0.2	0.3	0.26	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.340481	NA	NA	NA	NA	NA	0.196	NA	4.827
1169	3	96338561	96338561	G	A	intergenic	LOC100287639,EPHA6	dist=936524;dist=194864	NA	NA	ncRNA_exonic	ENSG00000218754	NA	NA	NA	Score=752;Name=lod=1520	NA	3q11.2	NA	NA	NA	NA	rs9845161	0.1	0.1	0.07	0.0826677	0.173	0.001	0.0908	0.0749	0.0787	0.19	NA	0.1	0.07	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.040374	NA	NA	NA	NA	NA	0.043	NA	4.827
1169	6	31334265	31334265	T	C	intergenic	HLA-B,MICA	dist=9276;dist=37106	NA	NA	ncRNA_exonic	ENSG00000228432	NA	NA	NA	Score=584;Name=lod=316	NA	6p21.33	NA	NA	NA	NA	rs3873393	0.2	0.2	0.18	0.234625	0.173	0.1617	0.3444	0.3343	0.1605	0.16	0.14	0.35	0.25	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.322573	NA	NA	NA	NA	NA	NA	NA	4.827
1169	13	24902861	24902861	G	A	intergenic	C1QTNF9,PARP4	dist=6192;dist=92208	NA	NA	ncRNA_exonic	ENSG00000234627	NA	NA	NA	Score=676;Name=lod=746	NA	13q12.12	NA	NA	NA	NA	rs56272062	0.1	0.1	0.095	0.0822684	0.173	NA	0.1066	0.0983	0.0348	0.17	NA	0.11	0.09	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.375249	2.375249	NA	NA	NA	NA	0.072	NA	4.827
1169	15	96932216	96932216	G	A	intergenic	NR2F2,SPATA8	dist=48724;dist=394463	NA	NA	ncRNA_exonic	ENSG00000259614	NA	NA	NA	Score=821;Name=lod=2885	NA	15q26.2	NA	NA	NA	NA	rs2008780	0.29	0.29	0.284	0.285743	0.173	0.2788	0.245	0.4448	0.2229	0.17	0.3	0.29	0.45	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.054233	NA	NA	NA	NA	NA	0.355	NA	4.827
1169	17	9142846	9142846	G	C	intronic	NTN1	NA	NA	NA	intronic	ENSG00000065320	NA	NA	NA	NA	NA	17p13.1	NA	Name=Egr-1	NA	NA	rs56235417	0.15	0.15	0.159	0.145367	0.173	0.1667	0.1095	0.1566	0.1053	0.17	0.19	0.1	0.12	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.032243	NA	NA	NA	NA	NA	0.109	NA	4.827
1169	17	20332950	20332950	G	A	intergenic	CCDC144CP,LGALS9B	dist=27446;dist=20226	NA	NA	ncRNA_exonic	ENSG00000189423	NA	NA	NA	Score=616;Name=lod=427	NA	17p11.2	NA	NA	NA	NA	rs28374412	0.17	0.17	0.164	0.25639	0.173	0.0982	0.1931	0.5446	0.1605	0.13	0.06	0.12	0.37	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.651897	NA	NA	NA	NA	NA	0.029	NA	4.827
1169	17	79805003	79805003	A	G	intronic	P4HB	NA	NA	NA	intronic	ENSG00000185624	NA	NA	NA	NA	NA	17q25.3	NA	NA	Name=9	NA	rs111301737	0.27	0.27	0.279	0.238419	0.173	0.2877	0.3141	0.3086	0.1063	0.18	0.35	0.28	0.31	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.357942	NA	NA	NA	NA	NA	0.246	NA	4.827
1169	19	20349185	20349185	G	A	intergenic	ZNF486,MIR1270-1	dist=37886;dist=160896	NA	NA	ncRNA_exonic	ENSG00000267383	NA	NA	NA	NA	NA	19p12	NA	Name=TAF1,TAF7_(SQ-8),SP1,Pol2,c-Fos,Pol2-4H8	NA	NA	rs11667100	0.29	0.29	0.272	0.293131	0.173	0.4583	0.3228	0.2458	0.2894	0.17	0.49	0.28	0.23	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.157116	NA	NA	NA	NA	NA	0.261	NA	4.827
1169	2	85489280	85489280	A	G	intronic	TCF7L1	NA	NA	NA	ncRNA_exonic	ENSG00000230299	NA	NA	NA	Score=385;Name=lod=49	NA	2p11.2	NA	NA	NA	NA	rs1991738	0.38	0.38	0.38	0.348642	0.507	0.2907	0.3429	0.3026	0.3119	0.5	0.29	0.38	0.32	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.675093	NA	NA	NA	NA	NA	0.377	NA	4.8263333
1169	20	19634747	19634747	T	C	exonic	SLC24A3	NA	synonymous SNV	SLC24A3:NM_020689:exon7:c.T654C:p.I218I	exonic	ENSG00000185052	NA	synonymous SNV	ENSG00000185052:ENST00000328041:exon7:c.T654C:p.I218I	Score=409;Name=lod=61	NA	20p11.23	NA	NA	NA	NA	rs3790279	0.56	0.56	0.531	0.54992	0.6332	0.2669	0.572	0.7458	0.4755	0.64	0.28	0.59	0.73	0.5824	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.052411	NA	NA	0.624767	0.725601	NA	0.5	NA	4.8262996
1169	15	81591639	81591639	G	A	intronic	IL16	NA	NA	NA	intronic	ENSG00000172349	NA	NA	NA	NA	NA	15q25.1	NA	NA	Name=2	NA	rs4778636	0.16	0.16	0.16	0.154952	0.0746	0.1647	0.1671	0.2693	0.0644	0.07	0.19	0.15	0.26	0.0992	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.846112	NA	NA	NA	NA	NA	0.181	NA	4.8262
1169	13	61109375	61109375	A	C	intronic	TDRD3	NA	NA	NA	intronic	ENSG00000083544	NA	NA	NA	Score=519;Name=lod=171	NA	13q21.2	NA	NA	NA	NA	rs41293436	0.05	0.05	0.044	0.0435304	0.0666	0.0476	0.0346	0.0295	0.0409	0.07	0.05	0.02	0.03	0.0484	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.463081	2.463081	NA	0.058953	0.047208	NA	0.051	NA	4.826047
1169	4	139402774	139402774	T	C	intergenic	LINC00499,CCRN4L	dist=57276;dist=534169	NA	NA	ncRNA_exonic	ENSG00000248305	NA	NA	NA	Score=712;Name=lod=1048	NA	4q28.3	NA	NA	NA	NA	rs17050441	0.14	0.14	0.136	0.123802	0.174	0.001	0.1354	0.2345	0.0409	0.17	NA	0.15	0.25	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.773479	1.773479	NA	NA	NA	NA	0.203	NA	4.826
1169	5	79628207	79628207	T	A	intergenic	SPZ1,CRSP8P	dist=10547;dist=18217	NA	NA	ncRNA_exonic	ENSG00000227087	NA	NA	NA	Score=581;Name=lod=305	NA	5q14.1	NA	NA	NA	NA	rs12523297	0.18	0.18	0.18	0.173123	0.174	0.373	0.111	0.0106	0.2301	0.18	0.38	0.11	0.01	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.705103	2.705103	0	NA	NA	NA	0.174	NA	4.826
1169	10	61413353	61413353	A	G	intronic	SLC16A9	NA	NA	NA	intronic	ENSG00000165449	NA	NA	NA	NA	Name=Uric acid levels	10q21.2	NA	NA	NA	NA	rs12356193	0.1	0.1	0.099	0.0864617	0.174	0.001	0.0893	0.0628	0.1145	0.18	0.0017	0.1	0.07	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.8046	NA	NA	NA	NA	NA	0.167	NA	4.826
1169	17	34077428	34077428	A	C	intronic	GAS2L2	NA	NA	NA	intronic	ENSG00000132139	NA	NA	NA	NA	NA	17q12	NA	NA	Name=42	NA	rs11650416	0.2	0.2	0.164	0.18131	0.174	0.2778	0.2133	0.1286	0.138	0.19	0.27	0.22	0.14	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.657465	NA	NA	NA	NA	NA	0.217	NA	4.826
1169	1	233512313	233512313	C	T	intronic	KIAA1804	NA	NA	NA	intronic	ENSG00000143674	NA	NA	NA	NA	NA	1q42.2	NA	NA	Name=6	NA	rs1294248	0.08	0.08	0.076	0.0874601	0.0537	0.004	0.0749	0.2322	0.0215	0.04	0.01	0.08	0.21	0.0604	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.413932	NA	NA	0.060349	0.214934	NA	0.159	NA	4.825551
1169	6	29913179	29913179	C	T	intronic	HLA-A	NA	NA	NA	intronic	ENSG00000206503	NA	NA	NA	NA	NA	6p22.1	NA	Name=Pol2-4H8	NA	NA	rs2975056	0.19	0.19	0.168	NA	NA	NA	NA	NA	NA	0.15	0.17	0.19	0.26	0.1749	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.681193	NA	NA	NA	NA	NA	0.109	NA	4.8251
1169	2	89512775	89512775	T	G	intergenic	MIR4436A,NONE	dist=400807;dist=NONE	NA	NA	downstream	ENSG00000244575	NA	NA	NA	NA	NA	2p11.2	NA	Name=CTCF	Name=44	NA	rs2848233	0.47	0.47	0.386	0.444489	0.675	0.4663	0.5014	0.0787	0.6391	0.69	0.44	0.55	0.12	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.222652	NA	NA	NA	NA	NA	0.188	NA	4.825
1169	17	68237670	68237670	T	C	intergenic	KCNJ2,SOX9	dist=61487;dist=1879491	NA	NA	ncRNA_exonic	ENSG00000267170	NA	NA	NA	Score=813;Name=lod=2682	NA	17q24.3	NA	NA	NA	NA	rs10512538	0.1	0.1	0.084	0.0888578	0.175	0.0298	0.0764	0.0779	0.0849	0.18	0.03	0.09	0.07	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.083906	NA	NA	NA	NA	NA	0.08	NA	4.825
1170	8	98943545	98943545	A	G	exonic	MATN2	NA	synonymous SNV	MATN2:NM_002380:exon3:c.A507G:p.T169T,MATN2:NM_030583:exon3:c.A507G:p.T169T	exonic	ENSG00000132561	NA	synonymous SNV	ENSG00000132561:ENST00000520016:exon2:c.A507G:p.T169T,ENSG00000132561:ENST00000254898:exon3:c.A507G:p.T169T,ENSG00000132561:ENST00000521689:exon3:c.A507G:p.T169T,ENSG00000132561:ENST00000524308:exon3:c.A507G:p.T169T	NA	NA	8q22.1	NA	NA	NA	NA	rs2290471	0.29	0.29	0.299	0.277556	0.2883	0.0804	0.2565	0.5023	0.181	0.29	0.08	0.28	0.53	0.2698	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.667953	NA	NA	0.283876	0.433286	NA	0.319	NA	4.8246906
1170	15	34634124	34634124	C	G	UTR3	NOP10	NM_018648:c.*45G>C	NA	NA	UTR3	ENSG00000182117	ENST00000328848:c.*45G>C,ENST00000557912:c.*71G>C	NA	NA	NA	NA	15q14	NA	Name=BRF2	NA	NA	rs1045238	0.22	0.22	0.19	0.210064	0.169	0.3353	0.1974	0.1354	0.2331	0.18	0.35	0.18	0.15	0.1782	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.290785	2.290785	NA	0.16147	0.150841	ID=COSN164887;OCCURENCE=1(NS)	0.13	NA	4.8246634
1170	20	19634732	19634732	G	A	exonic	SLC24A3	NA	synonymous SNV	SLC24A3:NM_020689:exon7:c.G639A:p.L213L	exonic	ENSG00000185052	NA	synonymous SNV	ENSG00000185052:ENST00000328041:exon7:c.G639A:p.L213L	Score=459;Name=lod=98	NA	20p11.23	NA	NA	NA	NA	rs3790278	0.56	0.56	0.539	0.556709	0.6332	0.2669	0.572	0.7716	0.4755	0.64	0.28	0.59	0.75	0.5844	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.929685	NA	NA	0.624651	0.74739	NA	0.507	NA	4.8244156
1170	7	100411278	100411278	T	C	exonic	EPHB4	NA	synonymous SNV	EPHB4:NM_004444:exon10:c.A1752G:p.G584G	exonic	ENSG00000196411	NA	synonymous SNV	ENSG00000196411:ENST00000358173:exon10:c.A1752G:p.G584G,ENSG00000196411:ENST00000360620:exon10:c.A1752G:p.G584G	Score=459;Name=lod=98	NA	7q22.1	NA	NA	NA	NA	rs314359	0.59	0.59	0.593	0.575679	0.6282	0.6329	0.67	0.4561	0.5573	0.62	0.61	0.61	0.5	0.608	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.131187	NA	NA	0.606163	0.487744	NA	0.659	NA	4.8243036
1170	X	151899913	151899913	T	C	exonic	MAGEA12	NA	synonymous SNV	MAGEA12:NM_005367:exon2:c.A888G:p.G296G,MAGEA12:NM_001166386:exon3:c.A888G:p.G296G,MAGEA12:NM_001166387:exon3:c.A888G:p.G296G	exonic	ENSG00000213401	NA	synonymous SNV	ENSG00000213401:ENST00000357916:exon2:c.A888G:p.G296G,ENSG00000213401:ENST00000393869:exon3:c.A888G:p.G296G,ENSG00000213401:ENST00000393900:exon3:c.A888G:p.G296G	NA	NA	Xq28	NA	NA	NA	NA	rs2233055	0.42	0.42	0.4372	NA	NA	NA	NA	NA	NA	0.44	0.68	0.22	0.24	0.4268	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.634374	NA	NA	0.415577	0.266754	NA	0.312	NA	4.8242896
1170	16	20610962	20610962	C	G	intergenic	ACSM2B,ACSM1	dist=23267;dist=23597	NA	NA	ncRNA_exonic	ENSG00000260762	NA	NA	NA	Score=502;Name=lod=146	NA	16p12.3	NA	NA	NA	NA	rs7498509	0.32	0.32	0.297	0.394968	0.1759	0.3482	0.2017	0.6634	0.4427	0.19	0.33	0.21	0.59	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.833893	NA	NA	NA	NA	NA	0.399	NA	4.8241
1170	16	20615675	20615675	T	C	intergenic	ACSM2B,ACSM1	dist=27980;dist=18884	NA	NA	ncRNA_exonic	ENSG00000260762	NA	NA	NA	Score=329;Name=lod=29	NA	16p12.3	NA	NA	NA	NA	rs9931725	0.33	0.33	0.311	0.395567	0.1759	0.3502	0.2017	0.6634	0.4438	0.19	0.34	0.21	0.62	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.544512	NA	NA	NA	NA	NA	0.391	NA	4.8241
1170	16	20615752	20615752	T	C	intergenic	ACSM2B,ACSM1	dist=28057;dist=18807	NA	NA	ncRNA_exonic	ENSG00000260762	NA	NA	NA	Score=346;Name=lod=34	NA	16p12.3	NA	NA	NA	NA	rs9931747	0.33	0.33	0.317	0.384984	0.1759	0.3492	0.2017	0.6634	0.3906	0.19	0.34	0.21	0.62	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.082463	NA	NA	NA	NA	NA	0.399	NA	4.8241
1170	10	27459670	27459670	C	T	exonic	MASTL	NA	synonymous SNV	MASTL:NM_001172303:exon8:c.C1782T:p.I594I,MASTL:NM_001172304:exon8:c.C1782T:p.I594I,MASTL:NM_032844:exon8:c.C1782T:p.I594I	exonic	ENSG00000120539	NA	synonymous SNV	ENSG00000120539:ENST00000342386:exon8:c.C1782T:p.I594I,ENSG00000120539:ENST00000375940:exon8:c.C1782T:p.I594I,ENSG00000120539:ENST00000375946:exon8:c.C1782T:p.I594I	Score=480;Name=lod=119	NA	10p12.1	NA	NA	NA	NA	rs1981296	0.51	0.51	0.503	0.504593	0.6024	0.4375	0.5231	0.5234	0.4346	0.59	0.38	0.55	0.51	0.5911	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.001495	NA	NA	0.649651	0.551067	NA	0.514	NA	4.8235156
1170	3	183663506	183663506	T	C	intronic	ABCC5	NA	NA	NA	intronic	ENSG00000114770	NA	NA	NA	NA	NA	3q27.1	NA	NA	Name=3	NA	rs4148589	0.25	0.25	0.231	0.249201	0.1769	0.4385	0.2709	0.1936	0.1881	0.18	0.42	0.2	0.21	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.300245	NA	NA	NA	NA	NA	0.174	NA	4.8231
1170	6	38976849	38976849	G	A	intronic	DNAH8	NA	NA	NA	intronic	ENSG00000124721	NA	NA	NA	NA	NA	6p21.2	NA	NA	Name=6	NA	rs28360624	0.11	0.11	0.092	0.107228	0.1769	0.002	0.1239	0.121	0.1135	0.17	0.0035	0.14	0.12	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.088568	NA	NA	NA	NA	NA	0.109	NA	4.8231
1170	15	85438397	85438397	A	C	intronic	SLC28A1	NA	NA	NA	intronic	ENSG00000156222	NA	NA	NA	NA	NA	15q25.3	NA	Name=AP-2alpha,c-Myc,AP-2gamma	Name=7	NA	rs8187753	0.42	0.42	0.362	0.451677	0.3698	0.6815	0.4524	0.1861	0.6575	0.38	0.66	0.43	0.2	0.449	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.289075	NA	NA	0.35816	0.20356	NA	0.319	NA	4.82304
1170	1	235747154	235747154	A	G	intronic	GNG4	NA	NA	NA	intronic	ENSG00000168243	NA	NA	NA	NA	NA	1q42.3	NA	Name=CTCF	Name=24	NA	rs2774336	0.49	0.49	0.46	0.494808	0.3767	0.7996	0.5231	0.3722	0.4479	0.39	0.76	0.45	0.34	0.4419	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.85447	NA	NA	0.358953	0.375624	NA	0.42	NA	4.822447
1170	17	16246016	16246016	A	C	UTR3	CENPV	NM_181716:c.*115T>G	NA	NA	UTR3	ENSG00000166582	ENST00000299736:c.*115T>G,ENST00000476243:c.*115T>G	NA	NA	NA	Name=Amyotrophic lateral sclerosis	17p11.2	NA	NA	NA	NA	rs7477	0.28	0.28	0.237	0.229633	0.5109	0.004	0.3703	0.1059	0.2403	0.51	0.01	0.43	0.13	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.513503	NA	NA	NA	NA	NA	0.261	NA	4.8224334
1170	1	171652759	171652759	A	G	intergenic	MYOC,VAMP4	dist=30986;dist=16537	NA	NA	ncRNA_exonic	ENSG00000230364	NA	NA	NA	Score=822;Name=lod=2915	NA	1q24.3	NA	NA	NA	NA	rs11811780	0.16	0.16	0.161	0.172524	0.1779	0.12	0.134	0.2413	0.1554	0.17	0.12	0.14	0.2	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.685069	NA	NA	NA	NA	NA	0.196	NA	4.8221
1170	13	31127894	31127894	C	T	intergenic	HMGB1,USPL1	dist=87813;dist=63936	NA	NA	ncRNA_exonic	ENSG00000224117	NA	NA	NA	Score=631;Name=lod=487	NA	13q12.3	NA	NA	NA	NA	rs11618264	0.21	0.21	0.188	0.201278	0.1779	0.251	0.2349	0.143	0.229	0.2	0.25	0.25	0.14	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.949178	NA	NA	NA	NA	ID=COSN164455;OCCURENCE=1(NS)	0.203	NA	4.8221
1170	9	139100805	139100805	T	C	exonic	QSOX2	NA	synonymous SNV	QSOX2:NM_181701:exon12:c.A1866G:p.P622P	exonic	ENSG00000165661	NA	synonymous SNV	ENSG00000165661:ENST00000358701:exon12:c.A1866G:p.P622P	NA	NA	9q34.3	NA	NA	NA	NA	rs9696116	0.17	0.17	0.148	0.160343	0.2932	0.12	0.2147	0.0227	0.2127	0.29	0.12	0.21	0.03	0.2524	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.376559	NA	NA	0.299302	0.082842	NA	0.13	NA	4.8217646
1170	7	100391581	100391581	T	C	exonic	ZAN	NA	unknown	UNKNOWN	exonic	ENSG00000146839	NA	synonymous SNV	ENSG00000146839:ENST00000542585:exon43:c.T7989C:p.S2663S	Score=333;Name=lod=30	NA	7q22.1	NA	NA	NA	NA	rs314339	0.37	0.37	0.393	0.344848	0.5427	0.0655	0.3213	0.4297	0.3313	0.54	0.06	0.34	0.49	0.4451	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.724074	NA	NA	0.52424	0.45109	NA	0.478	NA	4.8212933
1170	6	32713854	32713854	G	A	intronic	HLA-DQA2	NA	NA	NA	intronic	ENSG00000237541	NA	NA	NA	Score=346;Name=lod=34	NA	6p21.32	NA	NA	NA	NA	rs4398729	0.04	0.04	0.03	0.0429313	0.0606	0.0377	0.0375	0.0121	0.0757	0.06	0.03	0.04	0.01	0.0538	0.064	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.932061	NA	NA	0.064415	0.017538	NA	0.022	NA	4.821185
1170	1	171652664	171652664	G	A	intergenic	MYOC,VAMP4	dist=30891;dist=16632	NA	NA	ncRNA_exonic	ENSG00000230364	NA	NA	NA	Score=822;Name=lod=2915	NA	1q24.3	NA	NA	NA	NA	rs9661596	0.16	0.16	0.172	0.177915	0.1789	0.12	0.1383	0.2587	0.1554	0.17	0.12	0.14	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.20842	NA	NA	NA	NA	NA	0.203	NA	4.8211
1170	1	171652731	171652731	A	G	intergenic	MYOC,VAMP4	dist=30958;dist=16565	NA	NA	ncRNA_exonic	ENSG00000230364	NA	NA	NA	Score=822;Name=lod=2915	NA	1q24.3	NA	NA	NA	NA	rs9662853	0.16	0.16	0.177	0.178714	0.1789	0.12	0.1383	0.2617	0.1554	0.17	0.12	0.14	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.409847	NA	NA	NA	NA	NA	0.203	NA	4.8211
1170	1	171652978	171652978	T	C	intergenic	MYOC,VAMP4	dist=31205;dist=16318	NA	NA	ncRNA_exonic	ENSG00000230364	NA	NA	NA	Score=822;Name=lod=2915	NA	1q24.3	NA	NA	NA	NA	rs11799420	0.16	0.16	0.16	0.177915	0.1789	0.12	0.1383	0.2587	0.1554	0.17	0.12	0.14	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.66828	NA	NA	NA	NA	NA	0.203	NA	4.8211
1170	1	171653384	171653384	T	C	intergenic	MYOC,VAMP4	dist=31611;dist=15912	NA	NA	ncRNA_exonic	ENSG00000230364	NA	NA	NA	Score=822;Name=lod=2915	NA	1q24.3	NA	NA	NA	NA	rs10913489	0.16	0.16	0.152	0.177915	0.1789	0.12	0.1383	0.2587	0.1554	0.17	0.12	0.14	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.011969	NA	NA	NA	NA	NA	0.203	NA	4.8211
1170	1	171653401	171653401	G	T	intergenic	MYOC,VAMP4	dist=31628;dist=15895	NA	NA	ncRNA_exonic	ENSG00000230364	NA	NA	NA	Score=822;Name=lod=2915	NA	1q24.3	NA	NA	NA	NA	rs10913490	0.16	0.16	0.156	0.177915	0.1789	0.12	0.1383	0.2587	0.1554	0.17	0.12	0.14	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.181739	2.181739	NA	NA	NA	NA	0.203	NA	4.8211
1170	3	75591365	75591365	C	T	intergenic	FAM86DP,MIR1324	dist=107099;dist=88549	NA	NA	ncRNA_exonic	ENSG00000244674	NA	NA	NA	Score=793;Name=lod=2224	NA	3p12.3	NA	NA	NA	NA	rs62262160	0.1	0.1	0.063	0.103834	0.1789	0.0367	0.1758	0.0121	0.1687	0.18	0.03	0.15	0.03	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.172278	NA	NA	NA	NA	NA	0.029	NA	4.8211
1170	3	195723802	195723802	T	C	intergenic	SDHAP1,TFRC	dist=6652;dist=52353	NA	NA	ncRNA_exonic	ENSG00000231464	NA	NA	NA	Score=738;Name=lod=1327	NA	3q29	NA	NA	NA	NA	rs2593988	NA	NA	0.379	0.395567	0.1789	0.7321	0.415	0.3797	0.2791	NA	NA	NA	NA	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.010176	NA	NA	NA	NA	NA	0.014	NA	4.8211
1170	5	64483759	64483759	T	C	intronic	ADAMTS6	NA	NA	NA	intronic	ENSG00000049192	NA	NA	NA	Score=376;Name=lod=45	NA	5q12.3	NA	NA	NA	NA	rs16893475	0.17	0.17	0.19	0.177316	0.1789	0.1091	0.1643	0.2693	0.1309	0.16	0.09	0.19	0.28	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.251046	NA	NA	NA	NA	NA	0.268	NA	4.8211
1170	6	32427946	32427946	A	C	intergenic	HLA-DRA,HLA-DRB5	dist=15120;dist=57208	NA	NA	ncRNA_intronic	ENSG00000196301	NA	NA	NA	NA	NA	6p21.32	NA	Name=HA-E2F1	NA	NA	rs17209126	0.12	0.12	0.104	0.121006	0.1789	0.0526	0.1138	0.0976	0.1687	0.18	0.05	0.12	0.11	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.814275	NA	NA	NA	NA	NA	0.13	NA	4.8211
1170	11	118221137	118221137	C	T	intronic	CD3G	NA	NA	NA	intronic	ENSG00000160654	NA	NA	NA	NA	NA	11q23.3	NA	Name=CEBPB	NA	NA	rs3753060	0.26	0.26	0.256	0.297125	0.1789	0.5119	0.1095	0.1611	0.5143	0.19	0.53	0.14	0.14	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.71102	1.71102	NA	NA	NA	NA	0.203	NA	4.8211
1170	19	22790859	22790859	A	G	intergenic	LOC440518,ZNF492	dist=4507;dist=26267	NA	NA	ncRNA_exonic	ENSG00000269025	NA	NA	NA	Score=422;Name=lod=69	NA	19p12	NA	NA	NA	NA	rs2306964	0.34	0.34	0.334	0.36861	0.1789	0.3264	0.3804	0.6029	0.2822	0.18	0.31	0.35	0.62	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.381948	NA	NA	NA	NA	NA	0.413	NA	4.8211
1170	3	132394784	132394784	A	T	ncRNA_intronic	NPHP3-ACAD11	NA	NA	NA	intronic	ENSG00000081307,ENSG00000113971	NA	NA	NA	Score=259;Name=lod=15	NA	3q22.1	NA	NA	NA	NA	rs12635575	0.33	0.33	0.347	0.327875	0.162	0.5714	0.1081	0.4667	0.2157	0.16	0.58	0.11	0.45	0.2187	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.384512	1.384512	NA	0.132106	0.409339	NA	0.348	NA	4.8205273
1170	1	235747005	235747005	C	T	intronic	GNG4	NA	NA	NA	intronic	ENSG00000168243	NA	NA	NA	NA	NA	1q42.3	NA	Name=CTCF	Name=24	NA	rs2774335	0.49	0.49	0.47	0.499401	0.3757	0.7996	0.5231	0.3903	0.4479	0.39	0.76	0.45	0.35	0.4446	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.107071	NA	NA	0.359186	0.392192	NA	0.428	NA	4.820514
1170	14	81329059	81329059	C	A	intronic	CEP128	NA	NA	NA	intronic	ENSG00000100629	NA	NA	NA	NA	NA	14q31.1	NA	NA	Name=5	NA	rs75446124	0.03	0.03	0.019	0.0219649	0.0686	NA	0.0331	0.0015	0.0164	0.07	NA	0.03	0.0041	0.0428	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.610059	1.610059	NA	0.068372	0.009986	NA	0.072	NA	4.820228
1170	1	210477579	210477579	A	T	intergenic	SERTAD4,HHAT	dist=61139;dist=24017	NA	NA	ncRNA_exonic	ENSG00000233455	NA	NA	NA	Score=493;Name=lod=134	NA	1q32.2	NA	NA	NA	NA	rs2057044	0.17	0.17	0.15	0.185903	0.1799	0.1419	0.1657	0.2118	0.2168	0.18	0.15	0.14	0.18	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.232345	NA	NA	NA	NA	NA	0.065	NA	4.8201
1170	14	49840891	49840891	A	C	intergenic	LINC00648,RPS29	dist=1576674;dist=202499	NA	NA	ncRNA_exonic	ENSG00000258401	NA	NA	NA	Score=676;Name=lod=742	NA	14q21.3	NA	NA	NA	NA	rs1952853	0.15	0.15	0.111	0.138379	0.1799	0.1548	0.2767	0.0454	0.1063	0.18	0.13	0.23	0.05	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.273391	NA	NA	NA	NA	NA	0.159	NA	4.8201
1170	19	14578674	14578674	C	T	intronic	PKN1	NA	NA	NA	intronic	ENSG00000123143	NA	NA	NA	NA	NA	19p13.12	NA	Name=CTCF,SMC3_(ab9263)	NA	NA	rs2287700	0.05	0.05	0.041	0.0549121	0.0636	0.0317	0.1182	0.0401	0.045	0.05	0.03	0.11	0.03	0.0602	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.189276	NA	NA	0.056189	0.041514	NA	0.08	NA	4.820011
1170	1	215793834	215793834	G	A	exonic	KCTD3	NA	synonymous SNV	KCTD3:NM_016121:exon18:c.G2322A:p.A774A	exonic	ENSG00000136636	NA	synonymous SNV	ENSG00000136636:ENST00000259154:exon18:c.G2322A:p.A774A	NA	NA	1q41	Score=839;Name=V$SRF_Q6	NA	NA	NA	rs14137	0.48	0.48	0.439	0.414337	0.6372	0.3492	0.6124	0.2867	0.2843	0.65	0.31	0.6	0.32	0.5547	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.353977	NA	NA	0.655116	0.317522	NA	0.536	NA	4.8196506
1170	12	124298224	124298224	G	T	intronic	DNAH10	NA	NA	NA	intronic	ENSG00000197653	NA	NA	NA	NA	NA	12q24.31	NA	Name=MafK_(SC-477),MafK_(ab50322)	NA	NA	rs75207436	0.04	0.04	0.042	0.0361422	0.0686	0.001	0.0389	0.0477	0.0215	0.07	NA	0.05	0.03	0.0537	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.598883	NA	NA	0.058256	0.053563	NA	0.029	NA	4.819444
1170	11	6486945	6486945	C	T	UTR5	TRIM3	NM_006458:c.-20G>A,NM_033278:c.-20G>A,NM_001248006:c.-20G>A	NA	NA	UTR5	ENSG00000110171	ENST00000525074:c.-20G>A,ENST00000345851:c.-20G>A,ENST00000359518:c.-20G>A,ENST00000537602:c.-20G>A,ENST00000528227:c.-20G>A,ENST00000529529:c.-20G>A	NA	NA	Score=333;Name=lod=30	NA	11p15.4	NA	NA	NA	NA	rs74053396	0.15	0.15	0.151	0.170327	0.167	0.0238	0.1643	0.2655	0.2004	0.16	0.03	0.14	0.27	0.1673	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.613822	1.613822	NA	0.179818	0.248523	NA	0.268	NA	4.8192154
1170	1	205028581	205028581	C	G	intronic	CNTN2	NA	NA	NA	intronic	ENSG00000184144	NA	NA	NA	NA	NA	1q32.1	Score=973;Name=V$AP2GAMMA_01	NA	NA	NA	rs2305278	0.23	0.23	0.184	0.23103	0.1809	0.3948	0.2637	0.093	0.2771	0.18	0.41	0.27	0.08	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.638326	NA	NA	NA	NA	NA	0.145	NA	4.8191
1170	2	43053974	43053974	A	C	intergenic	HAAO,ZFP36L2	dist=34223;dist=395567	NA	NA	ncRNA_exonic	ENSG00000232202	NA	NA	NA	Score=393;Name=lod=53	NA	2p21	NA	NA	NA	NA	rs111771090	0.21	0.21	0.069	0.0964457	0.1809	0.0149	0.1527	0.0144	0.1646	0.27	0.15	0.24	0.15	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.12053	NA	NA	NA	NA	NA	0.072	NA	4.8191
1170	7	23603318	23603318	A	G	intergenic	TRA2A,CLK2P	dist=31662;dist=21017	NA	NA	ncRNA_exonic	ENSG00000224785	NA	NA	NA	Score=879;Name=lod=4972	NA	7p15.3	NA	NA	NA	NA	rs227944	0.2	0.2	0.165	0.194089	0.1809	0.4246	0.1902	0.0045	0.229	0.18	0.4	0.18	0.0041	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.200855	NA	NA	NA	NA	NA	0.123	NA	4.8191
1170	7	128210320	128210320	C	T	intergenic	METTL2B,FLJ45340	dist=67342;dist=70975	NA	NA	ncRNA_exonic	ENSG00000213280	NA	NA	NA	Score=734;Name=lod=1288	NA	7q32.1	NA	NA	NA	NA	rs113702966	0.15	0.15	0.139	0.13139	0.1809	0.0526	0.1484	0.1929	0.0665	0.18	0.05	0.18	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.503099	NA	NA	NA	NA	NA	0.152	NA	4.8191
1170	18	12367442	12367442	T	C	intronic	AFG3L2	NA	NA	NA	intronic	ENSG00000141385	NA	NA	NA	NA	NA	18p11.21	NA	NA	Name=12	NA	rs8093375	0.18	0.18	0.152	0.170727	0.1809	0.254	0.281	0.0893	0.1063	0.17	0.2	0.28	0.07	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.390488	NA	NA	NA	NA	NA	0.138	NA	4.8191
1170	19	22793038	22793038	A	G	intergenic	LOC440518,ZNF492	dist=6686;dist=24088	NA	NA	ncRNA_exonic	ENSG00000269316	NA	NA	NA	Score=747;Name=lod=1450	NA	19p12	NA	NA	NA	NA	rs8111395	0.38	0.38	0.37	0.411941	0.1809	0.3115	0.3919	0.7678	0.2863	0.18	0.3	0.36	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.821417	NA	NA	NA	NA	NA	0.442	NA	4.8191
1170	13	45010616	45010616	G	A	intronic	TSC22D1	NA	NA	NA	intronic	ENSG00000102804	NA	NA	NA	NA	NA	13q14.11	Score=730;Name=V$MEF2_04	Name=Pol2	NA	NA	rs7997320	0.35	0.35	0.292	0.324281	0.4036	0.3264	0.3602	0.2375	0.3323	0.42	0.34	0.35	0.25	0.368	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.801235	1.801235	NA	0.409651	0.261689	NA	0.29	NA	4.818749
1170	8	39855494	39855494	C	G	intronic	IDO2	NA	NA	NA	ncRNA_exonic	ENSG00000253790	NA	NA	NA	Score=691;Name=lod=855	NA	8p11.21	NA	NA	NA	NA	rs10099877	0.4	0.4	0.387	0.412141	0.5149	0.2619	0.4582	0.3215	0.5511	0.53	0.24	0.46	0.34	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.423877	NA	NA	NA	NA	NA	0.362	NA	4.8184333
1170	8	39855660	39855660	C	G	intronic	IDO2	NA	NA	NA	ncRNA_exonic	ENSG00000253790	NA	NA	NA	Score=691;Name=lod=855	NA	8p11.21	NA	NA	NA	NA	rs877291	0.4	0.4	0.4	0.41274	0.5149	0.2629	0.4582	0.323	0.5511	0.53	0.24	0.46	0.34	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.034557	NA	NA	NA	NA	NA	0.362	NA	4.8184333
1170	1	92457843	92457843	C	T	exonic	BRDT	NA	nonsynonymous SNV	BRDT:NM_001242807:exon13:c.C1949T:p.P650L,BRDT:NM_001242808:exon13:c.C1949T:p.P650L,BRDT:NM_001242806:exon14:c.C2099T:p.P700L,BRDT:NM_001242810:exon14:c.C1868T:p.P623L,BRDT:NM_001726:exon14:c.C2087T:p.P696L,BRDT:NM_207189:exon14:c.C2087T:p.P696L,BRDT:NM_001242805:exon15:c.C2087T:p.P696L	exonic	ENSG00000137948	NA	nonsynonymous SNV	ENSG00000137948:ENST00000394530:exon13:c.C1949T:p.P650L,ENSG00000137948:ENST00000370389:exon14:c.C1868T:p.P623L,ENSG00000137948:ENST00000399546:exon14:c.C2087T:p.P696L,ENSG00000137948:ENST00000402388:exon14:c.C2087T:p.P696L,ENSG00000137948:ENST00000362005:exon15:c.C2087T:p.P696L	NA	NA	1p22.1	NA	NA	NA	NA	rs10747493	0.71	0.71	0.701	0.710064	0.8429	0.6081	0.7738	0.5908	0.7945	0.84	0.57	0.77	0.63	0.8166	0.86	0.16	T	0.0	B	0.0	B	0.442	N	1.000	P	-0.345	N	3.39	T	-0.913	T	0.003	T	0.093	-1.498	0.017	0.031	-0.347	-0.908	2.431	-1.498	NA	0.13	0.855496	0.627553	NA	0.71	NA	4.8183374
1170	2	38512934	38512934	C	T	intergenic	CYP1B1-AS1,ATL2	dist=103941;dist=9095	NA	NA	ncRNA_exonic	ENSG00000213594	NA	NA	NA	Score=730;Name=lod=1240	NA	2p22.2	NA	NA	NA	NA	rs4670859	0.14	0.14	0.137	0.151757	0.1819	0.0446	0.1571	0.1876	0.1789	0.18	0.05	0.14	0.17	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.102497	NA	NA	NA	NA	NA	0.145	NA	4.8181
1170	2	241079382	241079382	T	G	intronic	OTOS	NA	NA	NA	intronic	ENSG00000178602	NA	NA	NA	NA	NA	2q37.3	NA	NA	Name=3	NA	rs2291769	0.15	0.15	0.131	0.135184	0.1819	0.1706	0.1167	0.0862	0.1299	0.18	0.17	0.15	0.08	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.068821	NA	NA	NA	NA	NA	0.087	NA	4.8181
1170	12	31907659	31907659	C	T	intergenic	AMN1,H3F3C	dist=25551;dist=36460	NA	NA	ncRNA_exonic	ENSG00000223722	NA	NA	NA	NA	NA	12p11.21	NA	Name=STAT1,STAT2	NA	NA	rs11613702	0.13	0.13	0.089	0.1252	0.1819	0.1101	0.2911	0.0144	0.1145	0.16	0.1	0.25	0.02	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.150644	NA	NA	NA	NA	NA	0.181	NA	4.8181
1170	12	63052601	63052601	G	T	intronic	PPM1H	NA	NA	NA	intronic	ENSG00000111110	NA	NA	NA	Score=724;Name=lod=1168	NA	12q14.1	NA	NA	NA	NA	rs11174588	0.1	0.1	0.096	0.0784744	0.1819	0.0149	0.1081	0.0265	0.0869	0.18	0.01	0.12	0.05	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.330018	NA	NA	NA	NA	NA	0.152	NA	4.8181
1170	14	35981907	35981907	T	C	intergenic	NFKBIA,INSM2	dist=107947;dist=21341	NA	NA	ncRNA_exonic	ENSG00000258783	NA	NA	NA	Score=660;Name=lod=640	NA	14q13.2	NA	NA	NA	NA	rs2899838	0.35	0.35	0.367	0.35024	0.1819	0.7133	0.1916	0.2663	0.3753	0.2	0.75	0.22	0.24	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.694947	1.694947	NA	NA	NA	NA	0.478	NA	4.8181
1170	15	70347362	70347362	C	A	intronic	TLE3	NA	NA	NA	intronic	ENSG00000140332	NA	NA	NA	NA	NA	15q23	NA	NA	NA	NA	rs4777227	0.67	0.67	0.648	0.717851	0.7038	0.7708	0.6484	0.5794	0.9141	0.68	0.75	0.63	0.58	0.765	0.75	0.25	T	.	.	.	.	.	.	1.000	P	.	.	.	.	-1.041	T	0.000	T	.	-0.725	0.893	-5.31	-1.780	-0.649	8.379	-0.724716	NA	NA	0.713515	0.629552	NA	0.638	NA	4.817685
1170	2	38512793	38512793	A	G	intergenic	CYP1B1-AS1,ATL2	dist=103800;dist=9236	NA	NA	ncRNA_exonic	ENSG00000213594	NA	NA	NA	Score=680;Name=lod=770	NA	2p22.2	NA	NA	NA	NA	rs17420264	0.14	0.14	0.125	0.152756	0.1829	0.0446	0.1556	0.1906	0.18	0.18	0.05	0.14	0.17	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.01632	NA	NA	NA	NA	NA	0.159	NA	4.8171
1170	6	7517239	7517239	G	A	intergenic	RIOK1,DSP	dist=98969;dist=24631	NA	NA	ncRNA_exonic	ENSG00000234115	NA	NA	NA	Score=706;Name=lod=988	NA	6p24.3	NA	NA	NA	NA	rs6597269	0.21	0.21	0.208	0.225839	0.1829	0.1349	0.1671	0.4463	0.1074	0.16	0.1	0.17	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.159368	NA	NA	NA	NA	ID=COSN167684;OCCURENCE=1(large_intestine)	0.225	NA	4.8171
1170	10	124166018	124166018	T	G	intronic	PLEKHA1	NA	NA	NA	intronic	ENSG00000107679	NA	NA	NA	Score=251;Name=lod=14	NA	10q26.13	NA	NA	NA	NA	rs41310276	0.09	0.09	0.084	0.0754792	0.1829	NA	0.0893	0.0719	0.0378	0.16	NA	0.09	0.08	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.449305	2.449305	NA	NA	NA	NA	0.058	NA	4.8171
1170	11	4745141	4745141	G	A	intergenic	OR51E2,OR51F1	dist=26065;dist=45068	NA	NA	ncRNA_exonic	ENSG00000271602	NA	NA	NA	Score=705;Name=lod=979	NA	11p15.4	NA	NA	NA	NA	rs11033543	0.09	0.09	0.069	0.072484	0.1829	NA	0.1282	0.0098	0.0787	0.18	NA	0.14	0.01	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.359472	NA	NA	NA	NA	NA	0.043	NA	4.8171
1170	16	69373894	69373894	T	A	intronic	NIP7	NA	NA	NA	intronic	ENSG00000132603,ENSG00000259900,ENSG00000260371	NA	NA	NA	NA	NA	16q22.1	NA	Name=Egr-1,Pol2	NA	NA	rs11643686	0.03	0.03	0.028	0.0257588	0.0596	0.0139	0.0389	0.0045	0.0225	0.06	0.01	0.05	0.0041	0.0528	0.071	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.778483	1.778483	NA	0.070698	0.014331	NA	0.007	NA	4.816902
1170	10	45652251	45652251	T	C	ncRNA_exonic	ANKRD30BP3	NA	NA	NA	ncRNA_exonic	ENSG00000230501,ENSG00000243349	NA	NA	NA	Score=363;Name=lod=40	NA	10q11.21	NA	NA	NA	NA	rs3862884	0.59	0.59	0.518	0.669529	0.8499	0.7937	0.7536	0.2753	0.8292	0.73	0.64	0.67	0.27	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.037491	NA	NA	NA	NA	NA	0.645	NA	4.8167666
1170	1	24421334	24421334	G	T	intronic	MYOM3	NA	NA	NA	intronic	ENSG00000142661	NA	NA	NA	NA	NA	1p36.11	NA	Name=CTCF_(SC-5916),Rad21,CTCF	Name=3	NA	rs6678411	0.29	0.29	0.252	0.229832	0.4274	0.3373	0.2161	0.0348	0.1892	0.45	0.31	0.24	0.03	0.3494	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.443634	NA	NA	0.406853	0.093555	NA	0.145	NA	4.816347
1170	19	48601454	48601454	T	C	exonic	PLA2G4C	NA	synonymous SNV	PLA2G4C:NM_001159322:exon6:c.A540G:p.P180P,PLA2G4C:NM_001159323:exon6:c.A510G:p.P170P,PLA2G4C:NM_003706:exon6:c.A510G:p.P170P	exonic	ENSG00000105499	NA	synonymous SNV	ENSG00000105499:ENST00000601946:exon1:c.A12G:p.P4P,ENSG00000105499:ENST00000413144:exon5:c.A510G:p.P170P,ENSG00000105499:ENST00000354276:exon6:c.A510G:p.P170P,ENSG00000105499:ENST00000599111:exon6:c.A540G:p.P180P,ENSG00000105499:ENST00000599921:exon6:c.A510G:p.P170P	Score=333;Name=lod=30	NA	19q13.33	NA	NA	NA	NA	rs251684	0.66	0.66	0.65	0.663938	0.6083	0.7411	0.6441	0.7179	0.5828	0.58	0.72	0.65	0.73	0.6131	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.03879	2.03879	NA	0.62907	0.695188	NA	0.754	NA	4.8161966
1170	2	200524744	200524744	G	A	intergenic	SATB2-AS1,FONG	dist=187263;dist=100515	NA	NA	ncRNA_exonic	ENSG00000213938	NA	NA	NA	Score=842;Name=lod=3520	NA	2q33.1	NA	NA	NA	NA	rs72920213	0.27	0.27	0.224	0.239417	0.1839	0.4613	0.3631	0.0976	0.1718	0.2	0.47	0.31	0.09	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.561301	NA	NA	NA	NA	ID=COSN166371;OCCURENCE=2(ovary),1(large_intestine)	0.167	NA	4.8161
1170	4	174537977	174537977	A	G	intergenic	NBLA00301,FBXO8	dist=74996;dist=619833	NA	NA	ncRNA_exonic	ENSG00000234801	NA	NA	NA	Score=775;Name=lod=1887	NA	4q34.1	NA	NA	NA	NA	rs72696236	0.14	0.14	0.137	0.14357	0.1839	0.248	0.0922	0.0567	0.1483	0.18	0.23	0.07	0.04	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.58975	NA	NA	NA	NA	ID=COSN167374;OCCURENCE=1(large_intestine)	0.167	NA	4.8161
1170	11	4745165	4745165	C	T	intergenic	OR51E2,OR51F1	dist=26089;dist=45044	NA	NA	ncRNA_exonic	ENSG00000271602	NA	NA	NA	Score=705;Name=lod=979	NA	11p15.4	NA	NA	NA	NA	rs11033544	0.09	0.09	0.076	0.0728834	0.1839	0.001	0.1282	0.0106	0.0777	0.18	NA	0.14	0.01	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.60678	NA	NA	NA	NA	NA	0.043	NA	4.8161
1170	1	110173775	110173775	G	T	UTR3	AMPD2	NM_001257360:c.*1G>T,NM_139156:c.*1G>T,NM_004037:c.*1G>T,NM_001257361:c.*1G>T,NM_203404:c.*1G>T	NA	NA	UTR3	ENSG00000116337	ENST00000342115:c.*1G>T,ENST00000256578:c.*1G>T,ENST00000358729:c.*1G>T,ENST00000369840:c.*1G>T,ENST00000528454:c.*1G>T,ENST00000393688:c.*1G>T,ENST00000476688:c.*1G>T	NA	NA	Score=355;Name=lod=37	NA	1p13.3	NA	NA	NA	NA	rs568686	0.11	0.11	0.103	0.125799	0.172	0.0446	0.1282	0.1233	0.1636	0.16	0.03	0.13	0.11	0.191	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.248688	3.248688	NA	0.154626	0.139863	NA	0.203	NA	4.8157074
1170	10	72536936	72536936	A	G	exonic	TBATA	NA	synonymous SNV	TBATA:NM_152710:exon7:c.T663C:p.A221A	exonic	ENSG00000166220	NA	synonymous SNV	ENSG00000166220:ENST00000456372:exon5:c.T663C:p.A221A,ENSG00000166220:ENST00000299290:exon7:c.T663C:p.A221A	NA	NA	10q22.1	NA	NA	NA	NA	rs2254433	0.23	0.23	0.23	0.236621	0.2863	0.1091	0.1571	0.3268	0.2515	0.3	0.1	0.2	0.32	0.2689	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.186146	NA	NA	0.29593	0.349977	NA	0.217	NA	4.8155366
1170	11	67352256	67352256	C	A	intronic	GSTP1	NA	NA	NA	intronic	ENSG00000084207	NA	NA	NA	NA	NA	11q13.2	NA	Name=Pol2(b),STAT3,GR	Name=7	NA	rs762803	0.32	0.32	0.333	0.311901	0.4095	0.1567	0.2709	0.3873	0.2986	0.41	0.15	0.31	0.39	0.3512	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.410625	NA	NA	0.424184	0.380722	NA	0.399	NA	4.815116
1170	4	117520689	117520689	C	G	intergenic	MIR1973,TRAM1L1	dist=299765;dist=484021	NA	NA	ncRNA_exonic	ENSG00000213493	NA	NA	NA	Score=632;Name=lod=495	NA	4q26	NA	NA	NA	NA	rs76540903	0.2	0.2	0.206	0.239816	0.1849	0.2312	0.219	0.1679	0.4172	0.19	0.27	0.17	0.17	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.044852	NA	NA	NA	NA	NA	0.174	NA	4.8151
1170	12	122991279	122991279	C	T	intronic	RSRC2	NA	NA	NA	intronic	ENSG00000111011	NA	NA	NA	NA	NA	12q24.31	NA	Name=MafK_(SC-477),MafK_(ab50322)	NA	NA	rs11058480	0.23	0.23	0.201	0.213259	0.1849	0.4216	0.1571	0.0756	0.2536	0.18	0.45	0.19	0.07	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.10027	NA	NA	NA	NA	NA	0.123	NA	4.8151
1170	20	47276381	47276381	A	G	intronic	PREX1	NA	NA	NA	intronic	ENSG00000124126	NA	NA	NA	NA	NA	20q13.13	NA	Name=CTCF	NA	NA	rs2294910	0.16	0.16	0.139	0.174121	0.1849	0.1597	0.2147	0.0847	0.2699	0.18	0.15	0.23	0.07	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.028044	NA	NA	NA	NA	NA	0.13	NA	4.8151
1171	2	113346413	113346413	C	G	intronic	CHCHD5	NA	NA	NA	UTR3	ENSG00000125611	ENST00000409719:c.*2303C>G	NA	NA	NA	NA	2q13	NA	Name=CEBPB	Name=33	NA	rs3748024	0.29	0.29	0.271	0.281949	0.4592	0.2331	0.3646	0.0514	0.4029	0.45	0.2	0.38	0.06	0.4083	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.457144	1.457144	NA	0.484302	0.128915	NA	0.37	NA	4.8148647
1171	20	44574533	44574533	C	T	intronic	PCIF1	NA	NA	NA	intronic	ENSG00000100982	NA	NA	NA	NA	NA	20q13.12	NA	Name=c-Myc,ZNF263,Max,Pol2	Name=37	NA	rs11696196	0.22	0.22	0.216	0.183307	0.4254	NA	0.304	0.0651	0.1973	0.43	NA	0.33	0.07	0.3296	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.709704	NA	NA	0.430233	0.138221	NA	0.312	NA	4.814767
1171	3	47912703	47912703	G	A	intronic	MAP4	NA	NA	NA	intronic	ENSG00000047849	NA	NA	NA	NA	NA	3p21.31	NA	Name=TAL1_(SC-12984)	NA	NA	rs17729010	0.03	0.03	0.026	0.0199681	0.0686	NA	0.036	0.0038	0.001	0.07	NA	0.04	0.01	0.0477	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.253534	NA	NA	0.068953	0.015433	NA	0.051	NA	4.814747
1171	11	823809	823809	C	G	exonic	PNPLA2	NA	synonymous SNV	PNPLA2:NM_020376:exon7:c.C873G:p.P291P	exonic	ENSG00000177666	NA	synonymous SNV	ENSG00000177666:ENST00000336615:exon7:c.C873G:p.P291P	NA	NA	11p15.5	NA	NA	NA	NA	rs1135628	0.25	0.25	0.239	0.267173	0.2644	0.4127	0.1888	0.0809	0.4274	0.27	0.36	0.22	0.09	0.3462	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.106176	NA	NA	0.241428	0.09272	NA	0.232	NA	4.8146386
1171	12	4737318	4737318	A	G	exonic	AKAP3	NA	synonymous SNV	AKAP3:NM_006422:exon4:c.T750C:p.N250N	exonic	ENSG00000111254	NA	synonymous SNV	ENSG00000111254:ENST00000228850:exon4:c.T750C:p.N250N,ENSG00000111254:ENST00000545990:exon5:c.T750C:p.N250N	Score=451;Name=lod=91	NA	12p13.32	Score=707;Name=V$HOX13_01	NA	NA	NA	rs7960207	0.83	0.83	0.81	0.817492	0.9761	0.7391	0.9366	0.677	0.8405	0.97	0.7	0.94	0.7	0.9097	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.283817	NA	NA	0.966279	0.707671	NA	0.877	NA	4.8145876
1171	19	12802153	12802153	C	A	intronic	FBXW9	NA	NA	NA	intronic	ENSG00000132004	NA	NA	NA	Score=472;Name=lod=111	NA	19p13.2	NA	NA	NA	NA	rs45478502	0.04	0.04	0.025	0.0223642	0.0706	NA	0.0375	0.0038	0.0102	0.07	NA	0.05	0.01	0.0497	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.395223	1.395223	NA	0.065212	0.011486	NA	0.007	NA	4.814488
1171	16	10206652	10206652	G	A	intronic	GRIN2A	NA	NA	NA	ncRNA_exonic	ENSG00000261647	NA	NA	NA	Score=809;Name=lod=2586	NA	16p13.2	NA	NA	NA	NA	rs1900718	0.46	0.46	0.416	0.457468	0.5189	0.5496	0.5893	0.2292	0.5143	0.52	0.54	0.57	0.21	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.106863	NA	NA	NA	NA	NA	0.493	NA	4.8144333
1171	22	40417780	40417780	C	T	exonic	FAM83F	NA	synonymous SNV	FAM83F:NM_138435:exon4:c.C1266T:p.N422N	exonic	ENSG00000133477	NA	synonymous SNV	ENSG00000133477:ENST00000333407:exon4:c.C1266T:p.N422N	NA	NA	22q13.1	NA	NA	NA	NA	rs5995793	0.24	0.24	0.234	0.288139	0.2873	0.0853	0.1628	0.3979	0.4387	0.3	0.08	0.17	0.37	0.2761	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.212028	NA	NA	0.288855	0.336591	NA	0.283	NA	4.8144116
1171	20	9497057	9497057	A	G	intronic	LAMP5	NA	NA	NA	intronic	ENSG00000125869	NA	NA	NA	NA	NA	20p12.2	NA	Name=GATA-2	Name=30	NA	rs2232267	0.45	0.45	0.477	0.48123	0.3668	0.2063	0.3847	0.8601	0.4387	0.37	0.23	0.41	0.86	0.4202	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.068893	NA	NA	0.398837	0.8064	NA	0.493	NA	4.814163
1171	1	205568438	205568438	G	T	intronic	MFSD4	NA	NA	NA	intronic	ENSG00000174514	NA	NA	NA	NA	NA	1q32.1	NA	NA	Name=15	NA	rs2282451	0.32	0.32	0.27	0.351438	0.1859	0.6399	0.3948	0.1536	0.4611	0.19	0.6	0.34	0.15	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.558811	1.558811	NA	NA	NA	NA	0.297	NA	4.8141
1171	11	16506090	16506090	G	A	intergenic	SOX6,C11orf58	dist=8155;dist=254058	NA	NA	ncRNA_exonic	ENSG00000213785	NA	NA	NA	Score=606;Name=lod=388	NA	11p15.1	NA	NA	NA	NA	rs10832616	0.2	0.2	0.163	0.194089	0.1859	0.2956	0.33	0.0522	0.1933	0.19	0.28	0.25	0.07	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.487718	NA	NA	NA	NA	NA	0.152	NA	4.8141
1171	14	70530530	70530530	G	T	intronic	SLC8A3	NA	NA	NA	intronic	ENSG00000100678	NA	NA	NA	Score=717;Name=lod=1097	NA	14q24.2	NA	NA	NA	NA	rs72729840	0.04	0.04	0.04	0.0365415	0.0716	NA	0.0231	0.0431	0.0389	0.07	NA	0.03	0.06	0.0502	0.076	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.675211	3.675211	NA	0.064186	0.033137	NA	0.058	NA	4.814014
1171	8	27462481	27462481	A	G	exonic	CLU	NA	synonymous SNV	CLU:NM_001831:exon5:c.T789C:p.H263H	exonic	ENSG00000120885	NA	synonymous SNV	ENSG00000120885:ENST00000523500:exon4:c.T789C:p.H263H,ENSG00000120885:ENST00000316403:exon5:c.T789C:p.H263H,ENSG00000120885:ENST00000405140:exon5:c.T789C:p.H263H,ENSG00000120885:ENST00000546343:exon5:c.T822C:p.H274H,ENSG00000120885:ENST00000560366:exon5:c.T945C:p.H315H,ENSG00000120885:ENST00000560566:exon5:c.T822C:p.H274H,ENSG00000120885:ENST00000523589:exon6:c.T687C:p.H229H	NA	NA	8p21.1	NA	NA	NA	NA	rs7982	0.65	0.65	0.627	0.664537	0.6143	0.7887	0.6556	0.5749	0.7157	0.61	0.81	0.64	0.55	0.6357	0.81	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	.	.	.	.	.	0.11	4.591	-0.917	-0.708	-0.719	4.812	0.109767	NA	NA	0.603023	0.587835	NA	0.58	NA	4.8136436
1171	1	243419429	243419429	T	A	UTR5	SDCCAG8	NM_006642:c.-47T>A	NA	NA	UTR5	ENSG00000054282	ENST00000391846:c.-47T>A,ENST00000355875:c.-47T>A,ENST00000366541:c.-47T>A,ENST00000343783:c.-30160T>A	NA	NA	Score=295;Name=lod=21	NA	1q43	NA	Name=TAF1,Pol2(b),E2F4,HMGN3,GABP,Pol2,STAT3,Pol2(phosphoS2),Sin3Ak-20,HA-E2F1,Pol2-4H8,E2F6,ZNF263,KAP1,CCNT2,STAT1,NFKB,HEY1,ELF1_(SC-631),Oct-2,TCF12,USF-1,GTF2B,TBP,CHD2_(N-1250),GTF2F1_(RAP-74)	NA	NA	rs3904682	0.49	0.49	0.446	0.412141	0.5209	0.7381	0.5548	0.0635	0.3344	0.52	0.74	0.55	0.1	0.4852	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.420685	2.420685	NA	0.513605	0.131185	NA	0.384	NA	4.8136284
1171	19	8841558	8841558	T	C	exonic	OR2Z1	NA	synonymous SNV	OR2Z1:NM_001004699:exon1:c.T168C:p.H56H	exonic	ENSG00000181733	NA	synonymous SNV	ENSG00000181733:ENST00000324060:exon1:c.T168C:p.H56H	Score=329;Name=lod=29	NA	19p13.2	NA	NA	NA	NA	rs28324	0.64	0.64	0.644	0.639377	0.6133	0.4563	0.6182	0.9652	0.4294	0.61	0.46	0.58	0.96	0.6119	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.793295	NA	NA	0.628023	0.914889	NA	0.667	NA	4.8134436
1171	6	111337078	111337078	A	G	intronic	RPF2	NA	NA	NA	intronic	ENSG00000197498	NA	NA	NA	NA	NA	6q21	NA	NA	Name=11	NA	rs4947093	0.05	0.05	0.031	0.061901	0.0537	0.0496	0.1182	0.0159	0.1053	0.06	0.03	0.1	0.02	0.0708	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.180323	NA	NA	0.062209	0.028597	NA	0.029	NA	4.813291
1171	2	139659956	139659956	C	T	intergenic	YY1P2,LRP1B	dist=3212;dist=1329040	NA	NA	ncRNA_exonic	ENSG00000232992	NA	NA	NA	Score=800;Name=lod=2387	NA	2q22.1	NA	NA	NA	NA	rs17660836	0.12	0.12	0.118	0.134585	0.1869	0.0655	0.0879	0.1067	0.2229	0.19	0.05	0.09	0.11	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.557987	NA	NA	NA	NA	NA	0.087	NA	4.8131
1171	3	142895511	142895511	C	T	intergenic	CHST2,SLC9A9	dist=52655;dist=88553	NA	NA	ncRNA_exonic	ENSG00000244171	NA	NA	NA	Score=831;Name=lod=3187	NA	3q24	NA	NA	NA	NA	rs894179	0.18	0.18	0.152	0.173922	0.1869	0.0446	0.1297	0.3449	0.0941	0.19	0.04	0.14	0.36	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.535974	NA	NA	NA	NA	NA	0.065	NA	4.8131
1171	6	137865100	137865100	C	A	intergenic	OLIG3,LOC100130476	dist=49569;dist=279707	NA	NA	ncRNA_exonic	ENSG00000213108	NA	NA	NA	Score=730;Name=lod=1234	NA	6q23.3	NA	NA	NA	NA	rs12661817	0.26	0.26	0.233	0.219249	0.1869	0.4127	0.3228	0.0855	0.1605	0.2	0.44	0.31	0.12	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.662559	NA	NA	NA	NA	NA	0.159	NA	4.8131
1171	10	115341545	115341545	G	C	intronic	HABP2	NA	NA	NA	intronic	ENSG00000148702	NA	NA	NA	NA	NA	10q25.3	NA	Name=CEBPB	NA	NA	rs2181082	0.21	0.21	0.196	0.188698	0.1869	0.3363	0.2161	0.1014	0.137	0.17	0.33	0.23	0.1	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.079613	NA	NA	NA	NA	NA	0.174	NA	4.8131
1171	8	71550144	71550144	A	G	ncRNA_intronic	LOC286190	NA	NA	NA	intronic	ENSG00000147592,ENSG00000246366	NA	NA	NA	Score=259;Name=lod=15	NA	8q13.3	NA	NA	NA	NA	rs35571096	0.19	0.19	0.199	0.202875	0.166	0.0159	0.1902	0.4289	0.137	0.17	0.01	0.17	0.43	0.1774	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.401408	NA	NA	0.177529	0.359936	NA	0.275	NA	4.8124043
1171	3	180490916	180490916	G	A	intergenic	CCDC39,FXR1	dist=93633;dist=139318	NA	NA	ncRNA_exonic	ENSG00000242068	NA	NA	NA	Score=512;Name=lod=160	NA	3q26.33	NA	NA	NA	NA	rs4521229	0.31	0.31	0.307	0.336062	0.1879	0.4196	0.2579	0.4153	0.3507	0.19	0.41	0.25	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.167364	NA	NA	NA	NA	NA	0.275	NA	4.8121
1171	9	124094590	124094590	A	T	intronic	GSN	NA	NA	NA	intronic	ENSG00000148180	NA	NA	NA	NA	NA	9q33.2	NA	Name=CTCF	NA	NA	rs7039494	0.16	0.16	0.148	0.152356	0.1879	0.1835	0.1254	0.1286	0.135	0.17	0.19	0.16	0.12	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.105791	NA	NA	NA	NA	NA	0.13	NA	4.8121
1171	19	20369503	20369503	C	G	intergenic	ZNF486,MIR1270-1	dist=58204;dist=140578	NA	NA	ncRNA_exonic	ENSG00000213985	NA	NA	NA	Score=772;Name=lod=1828	NA	19p12	NA	NA	NA	NA	rs8103002	0.4	0.4	0.411	0.414337	0.1879	0.4633	0.3501	0.6596	0.3108	0.19	0.51	0.31	0.66	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.031868	NA	1	NA	NA	NA	0.377	NA	4.8121
1171	11	57947264	57947264	C	G	exonic	OR9Q1	NA	synonymous SNV	OR9Q1:NM_001005212:exon3:c.C348G:p.A116A	exonic	ENSG00000186509	NA	synonymous SNV	ENSG00000186509:ENST00000335397:exon3:c.C348G:p.A116A	NA	NA	11q12.1	NA	NA	NA	NA	rs11229273	0.29	0.29	0.271	0.335264	0.2684	0.5754	0.2406	0.093	0.5511	0.26	0.55	0.23	0.09	0.3105	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.459136	NA	NA	0.276071	0.107224	NA	0.326	NA	4.8116956
1171	14	22783122	22783122	G	A	intergenic	OR4E2,DAD1	dist=648884;dist=250685	NA	NA	exonic	ENSG00000211819	NA	nonsynonymous SNV	ENSG00000211819:ENST00000390467:exon2:c.G88A:p.V30I	NA	NA	14q11.2	NA	NA	NA	NA	rs61733853	0.01	0.01	0.004	0.00499201	0.0099	NA	0.0058	0.0008	0.0102	0.01	NA	0.01	0.002	0.0059	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.507489	1.507489	0.02	0.005841	0.001616	NA	0.007	NA	4.8116924
1171	1	33990366	33990366	C	G	intronic	CSMD2	NA	NA	NA	intronic	ENSG00000121904	NA	NA	NA	NA	NA	1p35.1	NA	NA	Name=12	NA	rs35673825	0.2	0.2	0.179	0.204473	0.1889	0.369	0.2334	0.0204	0.2791	0.19	0.35	0.2	0.03	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.203248	NA	NA	NA	NA	NA	0.094	NA	4.8111
1171	3	128257206	128257206	T	A	intergenic	LOC90246,C3orf27	dist=27777;dist=33637	NA	NA	ncRNA_exonic	ENSG00000239405	NA	NA	NA	Score=727;Name=lod=1200	NA	3q21.3	NA	NA	NA	NA	rs75077124	0.19	0.19	0.162	0.189696	0.1889	0.3274	0.232	0.0318	0.2321	0.18	0.31	0.23	0.05	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.431251	NA	NA	NA	NA	NA	0.109	NA	4.8111
1171	4	11374296	11374296	T	A	intergenic	MIR572,HS3ST1	dist=3751;dist=25692	NA	NA	ncRNA_exonic	ENSG00000250896	NA	NA	NA	Score=728;Name=lod=1217	NA	4p15.33	NA	NA	NA	NA	rs62298091	0.15	0.15	0.145	0.157548	0.1889	0.0794	0.1095	0.1694	0.2239	0.2	0.09	0.12	0.16	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.032221	NA	NA	NA	NA	NA	0.116	NA	4.8111
1171	7	128757650	128757650	T	A	intergenic	TPI1P2,LOC407835	dist=60357;dist=8675	NA	NA	ncRNA_exonic	ENSG00000240416	NA	NA	NA	Score=609;Name=lod=399	NA	7q32.1	NA	NA	NA	NA	rs56797488	0.29	0.29	0.271	0.307308	0.1889	0.3194	0.3256	0.4198	0.2515	0.18	0.3	0.32	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.669555	NA	NA	NA	NA	NA	0.261	NA	4.8111
1171	14	39684613	39684613	T	C	intergenic	PNN,MIA2	dist=32191;dist=18512	NA	NA	ncRNA_exonic	ENSG00000270503	NA	NA	NA	Score=718;Name=lod=1108	NA	14q21.1	NA	NA	NA	NA	rs7157271	0.34	0.34	0.335	0.330072	0.1889	0.4554	0.2003	0.5166	0.1861	0.18	0.47	0.23	0.53	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.160176	NA	NA	NA	NA	NA	0.29	NA	4.8111
1171	17	10537142	10537142	C	T	intronic	MYH3	NA	NA	NA	intronic	ENSG00000109063	NA	NA	NA	NA	NA	17p13.1	NA	Name=POU2F2,Oct-2	NA	NA	rs78946532	0.09	0.09	0.073	0.0628994	0.1889	0.001	0.0778	0.0234	0.0399	0.19	NA	0.09	0.04	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.18877	NA	NA	NA	NA	NA	0.087	NA	4.8111
1171	22	20961109	20961109	C	T	intergenic	MED15,POM121L4P	dist=19190;dist=82734	NA	NA	ncRNA_exonic	ENSG00000223553	NA	NA	NA	Score=589;Name=lod=331	NA	22q11.21	NA	NA	NA	NA	rs13340098	0.17	0.17	0.176	0.202676	0.1889	0.13	0.1585	0.2095	0.3139	0.19	0.1	0.16	0.23	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.478432	2.478432	NA	NA	NA	NA	0.159	NA	4.8111
1171	16	66547777	66547777	G	C	intronic	TK2	NA	NA	NA	intronic	ENSG00000166548,ENSG00000260851	NA	NA	NA	NA	NA	16q21	NA	NA	Name=7	NA	rs2241620	0.15	0.15	0.142	0.190096	0.0547	0.1468	0.1023	0.3707	0.1922	0.05	0.15	0.09	0.35	0.1344	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.727152	NA	NA	NA	NA	NA	0.087	NA	4.8109
1171	6	29693726	29693726	G	T	intronic	HLA-F	NA	NA	NA	intronic	ENSG00000204642	NA	NA	NA	NA	NA	6p22.1	NA	Name=Pol2-4H8	NA	NA	rs114325231	0.06	0.06	0.045	0.0756789	0.0586	0.1567	0.0375	0.0008	0.138	0.06	0.14	0.03	0.002	0.0685	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.209597	NA	NA	0.062225	0.007225	NA	0.087	NA	4.810675
1171	1	38025103	38025103	T	C	intronic	DNALI1	NA	NA	NA	intronic	ENSG00000163879	NA	NA	NA	Score=472;Name=lod=110	NA	1p34.3	NA	NA	NA	NA	rs41267309	0.03	0.03	0.014	0.0229633	0.0547	0.0089	0.0202	0.0023	0.0348	0.06	0.0035	0.02	0.0041	0.0568	0.078	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.700029	2.700029	NA	0.077907	0.017703	NA	0.029	NA	4.810593
1171	5	178337122	178337122	G	A	intronic	ZFP2	NA	NA	NA	ncRNA_exonic	ENSG00000213328	NA	NA	NA	Score=750;Name=lod=1484	NA	5q35.3	NA	NA	NA	NA	rs2004503	0.46	0.46	0.444	0.454273	0.5229	0.498	0.3991	0.3812	0.4765	0.53	0.52	0.4	0.33	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.857423	1.857423	NA	NA	NA	ID=COSN167665;OCCURENCE=1(large_intestine)	0.435	NA	4.8104333
1171	5	171480055	171480055	G	A	intronic	STK10	NA	NA	NA	intronic	ENSG00000072786	NA	NA	NA	Score=637;Name=lod=518	NA	5q35.1	NA	Name=CTCF	NA	NA	rs4569891	0.61	0.61	0.588	NA	NA	NA	NA	NA	NA	0.6	0.75	0.67	0.39	0.5896	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.720612	1.720612	NA	0.600233	0.465956	NA	0.652	NA	4.810167
1171	7	56297202	56297202	C	G	intergenic	NUPR1L,LOC650226	dist=113112;dist=194195	NA	NA	ncRNA_exonic	ENSG00000227491	NA	NA	NA	Score=796;Name=lod=2297	NA	7p11.2	NA	NA	NA	NA	rs1625374	0.4	0.4	0.417	0.409345	0.1899	0.6111	0.2262	0.5696	0.3405	0.2	0.62	0.26	0.56	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.238766	NA	NA	NA	NA	NA	0.377	NA	4.8101
1171	7	100453208	100453208	T	C	intronic	SLC12A9	NA	NA	NA	intronic	ENSG00000146828	NA	NA	NA	NA	Name=Resting heart rate	7q22.1	NA	NA	NA	NA	rs314370	0.11	0.11	0.097	0.091254	0.1899	0.0327	0.1037	0.0416	0.1084	0.2	0.03	0.12	0.04	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.065127	NA	NA	NA	NA	NA	0.116	NA	4.8101
1171	10	103541948	103541948	C	T	intronic	NPM3	NA	NA	NA	intronic	ENSG00000107833	NA	NA	NA	NA	NA	10q24.32	NA	Name=ZNF263	NA	NA	rs3816354	0.29	0.29	0.278	0.26258	0.1899	0.5069	0.1974	0.2088	0.2045	0.18	0.54	0.24	0.22	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.50516	NA	NA	NA	NA	NA	0.304	NA	4.8101
1171	13	32799288	32799288	A	G	intronic	FRY	NA	NA	NA	intronic	ENSG00000073910	NA	NA	NA	NA	NA	13q13.1	NA	NA	Name=19	NA	rs1029398	0.27	0.27	0.273	0.297923	0.1899	0.3403	0.2133	0.3812	0.3129	0.19	0.34	0.21	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.516015	NA	NA	NA	NA	ID=COSN164456;OCCURENCE=1(NS)	0.283	NA	4.8101
1171	12	27849795	27849795	C	T	exonic	REP15	NA	synonymous SNV	REP15:NM_001029874:exon1:c.C300T:p.S100S	exonic	ENSG00000174236	NA	synonymous SNV	ENSG00000174236:ENST00000310791:exon1:c.C300T:p.S100S	NA	NA	12p11.22	Score=809;Name=V$OCT1_01	NA	NA	NA	rs929948	0.53	0.53	0.628	0.596046	0.6262	0.5268	0.6888	0.6399	0.5112	0.53	0.48	0.6	0.53	0.6137	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.737945	NA	NA	0.61686	0.629823	NA	NA	NA	4.8099066
1171	6	32088854	32088854	G	C	exonic	ATF6B	NA	synonymous SNV	ATF6B:NM_001136153:exon7:c.C603G:p.S201S,ATF6B:NM_004381:exon7:c.C612G:p.S204S	exonic	ENSG00000213676	NA	synonymous SNV	ENSG00000213676:ENST00000375201:exon7:c.C603G:p.S201S,ENSG00000213676:ENST00000375203:exon7:c.C612G:p.S204S	NA	NA	6p21.33	NA	NA	NA	NA	rs2228628	0.21	0.21	0.187	0.17512	0.2982	0.1776	0.2968	0.0197	0.1697	0.3	0.2	0.31	0.03	0.2729	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.278487	NA	NA	0.285814	0.068089	NA	0.29	NA	4.8097526
1171	1	19433449	19433449	A	G	exonic	UBR4	NA	synonymous SNV	UBR4:NM_020765:exon82:c.T12117C:p.V4039V	exonic	ENSG00000127481	NA	synonymous SNV	ENSG00000127481:ENST00000375217:exon82:c.T12096C:p.V4032V,ENSG00000127481:ENST00000375226:exon82:c.T12045C:p.V4015V,ENSG00000127481:ENST00000375254:exon82:c.T12117C:p.V4039V,ENSG00000127481:ENST00000375267:exon82:c.T12117C:p.V4039V	NA	NA	1p36.13	Score=674;Name=V$P53_01	NA	NA	NA	rs6426677	0.73	0.73	0.704	0.719249	0.6083	0.8105	0.7334	0.8366	0.5706	0.6	0.82	0.71	0.82	0.6461	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.477369	NA	NA	0.602558	0.806854	NA	0.725	NA	4.8097086
1171	17	42428538	42428538	G	A	intronic	GRN	NA	NA	NA	intronic	ENSG00000030582	NA	NA	NA	NA	NA	17q21.31	NA	Name=CTCF	NA	NA	rs72824736	0.04	0.04	0.028	0.0219649	0.0716	NA	0.0259	0.0076	0.0102	0.08	NA	0.04	0.02	0.0482	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.598153	NA	NA	0.070581	0.017703	NA	0.101	NA	4.809619
1171	6	32629718	32629718	G	A	intronic	HLA-DQB1	NA	NA	NA	ncRNA_intronic	ENSG00000241287	NA	NA	NA	NA	NA	6p21.32	NA	Name=Pol2-4H8	NA	NA	rs36233043	0.18	0.18	0.192	0.205072	0.1909	0.2331	0.1484	0.2201	0.2106	0.19	0.14	0.17	0.22	0.1779	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.045941	NA	NA	0.155039	0.184443	NA	0.167	NA	4.8094943
1171	11	119244095	119244095	C	T	exonic	USP2	NA	synonymous SNV	USP2:NM_004205:exon2:c.G96A:p.P32P	exonic	ENSG00000036672	NA	synonymous SNV	ENSG00000036672:ENST00000260187:exon2:c.G96A:p.P32P,ENSG00000036672:ENST00000527843:exon2:c.G96A:p.P32P,ENSG00000036672:ENST00000531070:exon2:c.G96A:p.P32P	Score=560;Name=lod=252	NA	11q23.3	NA	NA	NA	NA	rs587985	0.67	0.67	0.662	0.650958	0.6252	0.8353	0.6095	0.5174	0.6973	0.62	0.85	0.59	0.59	0.627	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.100786	NA	NA	0.605006	0.540473	NA	0.652	NA	4.8094606
1171	1	44967438	44967438	A	T	intronic	RNF220	NA	NA	NA	intronic	ENSG00000187147	NA	NA	NA	NA	NA	1p34.1	NA	NA	Name=6	NA	rs61787494	0.16	0.16	0.14	0.161941	0.1909	0.1369	0.2507	0.1218	0.1493	0.2	0.09	0.21	0.13	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.008422	NA	NA	NA	NA	NA	0.116	NA	4.8091
1171	1	216051287	216051287	A	G	intronic	USH2A	NA	NA	NA	intronic	ENSG00000042781	NA	NA	NA	Score=489;Name=lod=130	NA	1q41	NA	NA	NA	NA	rs7518358	0.29	0.29	0.291	0.326078	0.1909	0.4226	0.1945	0.3744	0.3937	0.18	0.42	0.18	0.36	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.45244	1.45244	NA	NA	NA	NA	0.29	NA	4.8091
1171	1	224805112	224805112	C	T	intronic	CNIH3	NA	NA	NA	intronic	ENSG00000143786	NA	NA	NA	NA	NA	1q42.12	NA	Name=SUZ12	NA	NA	rs1532557	0.29	0.29	0.228	0.295927	0.1909	0.3393	0.3588	0.3222	0.2791	0.21	0.34	0.35	0.29	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.451989	1.451989	NA	NA	NA	NA	0.159	NA	4.8091
1171	3	142895298	142895298	T	G	intergenic	CHST2,SLC9A9	dist=52442;dist=88766	NA	NA	ncRNA_exonic	ENSG00000244171	NA	NA	NA	Score=831;Name=lod=3187	NA	3q24	NA	NA	NA	NA	rs894178	NA	NA	0.13	0.182708	0.1909	0.0466	0.1326	0.3722	0.0941	NA	NA	NA	NA	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.199369	NA	NA	NA	NA	NA	0.087	NA	4.8091
1171	5	31538235	31538235	A	C	intronic	C5orf22	NA	NA	NA	intronic	ENSG00000082213	NA	NA	NA	NA	NA	5p13.3	NA	NA	Name=36	NA	rs7720494	0.15	0.15	0.139	0.161142	0.1909	0.0218	0.1916	0.2247	0.1667	0.18	0.03	0.21	0.21	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.933708	1.933708	NA	NA	NA	NA	0.188	NA	4.8091
1171	6	70048739	70048739	A	C	intronic	BAI3	NA	NA	NA	intronic	ENSG00000135298	NA	NA	NA	Score=776;Name=lod=1898	NA	6q13	NA	NA	NA	NA	rs11751775	0.23	0.23	0.227	0.222843	0.1909	0.121	0.2478	0.4085	0.092	0.19	0.12	0.23	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.96739	NA	NA	NA	NA	ID=COSN167824;OCCURENCE=1(large_intestine),2(endometrium)	0.261	NA	4.8091
1171	7	105170941	105170941	C	T	intergenic	PUS7,RINT1	dist=8256;dist=1591	NA	NA	ncRNA_exonic	ENSG00000223886	NA	NA	NA	Score=472;Name=lod=111	NA	7q22.3	NA	NA	NA	NA	rs55983796	0.1	0.1	0.091	0.120208	0.1909	0.0228	0.1513	0.0151	0.2679	0.21	0.01	0.15	0.02	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.533952	NA	NA	NA	NA	NA	0.094	NA	4.8091
1171	6	166571935	166571935	C	T	exonic	T	NA	synonymous SNV	T:NM_001270484:exon8:c.G1002A:p.A334A,T:NM_003181:exon9:c.G1176A:p.A392A	exonic	ENSG00000164458	NA	synonymous SNV	ENSG00000164458:ENST00000366871:exon8:c.G1002A:p.A334A,ENSG00000164458:ENST00000366876:exon8:c.G1179A:p.A393A,ENSG00000164458:ENST00000296946:exon9:c.G1176A:p.A392A	NA	NA	6q27	NA	NA	NA	NA	rs35819705	0.23	0.23	0.203	0.238419	0.2783	0.3095	0.3213	0.0499	0.32	0.25	0.31	0.29	0.07	0.2762	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.172244	NA	NA	0.30363	0.082198	NA	0.341	NA	4.8085366
1171	3	125475201	125475201	C	T	intergenic	OSBPL11,MIR548I1	dist=160820;dist=34046	NA	NA	ncRNA_exonic	ENSG00000239432	NA	NA	NA	Score=637;Name=lod=517	NA	3q21.2	NA	NA	NA	NA	rs2684960	0.18	0.18	0.137	0.178514	0.1918	0.1379	0.255	0.1997	0.1237	0.18	0.11	0.27	0.21	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.590159	NA	NA	NA	NA	NA	0.007	NA	4.8082
1171	4	125384323	125384323	C	T	intergenic	LOC285419,ANKRD50	dist=532805;dist=200881	NA	NA	ncRNA_exonic	ENSG00000248565	NA	NA	NA	Score=674;Name=lod=728	NA	4q28.1	NA	NA	NA	NA	rs56358767	0.14	0.14	0.137	0.0916534	0.1918	0.1032	0.1614	0.0121	0.0348	0.18	0.14	0.18	0.03	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.271938	NA	NA	NA	NA	NA	0.08	NA	4.8082
1171	17	25999628	25999628	C	T	intergenic	LGALS9,NOS2	dist=23042;dist=84164	NA	NA	ncRNA_exonic	ENSG00000265041	NA	NA	NA	Score=529;Name=lod=188	NA	17q11.2	NA	NA	NA	NA	rs7220339	0.25	0.25	0.252	0.249201	0.1918	0.2083	0.1772	0.4138	0.1789	0.2	0.19	0.19	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.33533	NA	NA	NA	NA	NA	0.304	NA	4.8082
1171	20	30904777	30904777	G	A	intronic	KIF3B	NA	NA	NA	intronic	ENSG00000101350	NA	NA	NA	NA	NA	20q11.21	NA	NA	Name=23	NA	rs2145245	0.3	0.3	0.29	0.286741	0.1918	0.251	0.2695	0.5363	0.0961	0.18	0.26	0.3	0.52	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.822919	NA	NA	NA	NA	NA	0.457	NA	4.8082
1171	12	133294728	133294728	C	T	intronic	PGAM5	NA	NA	NA	intronic	ENSG00000176894,ENSG00000247077	NA	NA	NA	NA	NA	12q24.33	NA	NA	Name=6	NA	rs11147014	0.19	0.19	0.132	0.149161	0.0517	0.502	0.1902	0.003	0.0542	0.06	0.51	0.19	0.0041	0.1084	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.720205	NA	NA	0.031774	0.011591	NA	0.051	NA	4.808126
1171	2	220379560	220379560	C	G	exonic	ASIC4	NA	synonymous SNV	ASIC4:NM_182847:exon1:c.C495G:p.A165A	exonic	ENSG00000072182	NA	synonymous SNV	ENSG00000072182:ENST00000347842:exon1:c.C495G:p.A165A,ENSG00000072182:ENST00000358078:exon1:c.C495G:p.A165A	NA	NA	2q35	NA	Name=GATA-2	NA	NA	rs3731909	0.57	0.57	0.512	0.506989	0.6362	0.7649	0.5634	0.1944	0.4908	0.65	0.75	0.54	0.24	0.5954	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.637772	NA	NA	0.627006	0.263958	NA	0.587	NA	4.8080606
1171	8	144403485	144403485	G	C	exonic	TOP1MT	NA	synonymous SNV	TOP1MT:NM_001258447:exon8:c.C738G:p.R246R,TOP1MT:NM_052963:exon8:c.C1032G:p.R344R,TOP1MT:NM_001258446:exon9:c.C738G:p.R246R	exonic	ENSG00000184428	NA	synonymous SNV	ENSG00000184428:ENST00000329245:exon8:c.C1032G:p.R344R,ENSG00000184428:ENST00000519139:exon8:c.C738G:p.R246R,ENSG00000184428:ENST00000519148:exon8:c.C738G:p.R246R,ENSG00000184428:ENST00000521193:exon9:c.C738G:p.R246R,ENSG00000184428:ENST00000523676:exon9:c.C738G:p.R246R	NA	NA	8q24.3	NA	NA	NA	NA	rs11544482	0.27	0.27	0.251	0.274361	0.3101	0.0774	0.1873	0.4962	0.2025	0.3	0.07	0.2	0.5	0.2691	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.456262	NA	NA	0.279419	0.47525	ID=COSM1162623;OCCURENCE=1(pancreas)	0.246	NA	4.8080476
1171	17	40705724	40705724	T	G	intronic	HSD17B1	NA	NA	NA	ncRNA_exonic	ENSG00000266962	NA	NA	NA	NA	NA	17q21.2	NA	Name=Pol2,Pol2-4H8	NA	NA	rs610177	0.52	0.52	0.517	0.574081	0.5258	0.4534	0.5144	0.6672	0.6646	0.53	0.45	0.47	0.64	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.409028	NA	NA	NA	NA	NA	0.645	NA	4.8075333
1171	12	6440009	6440009	T	C	intronic	TNFRSF1A	NA	NA	NA	intronic	ENSG00000067182	NA	NA	NA	NA	Name=Primary biliary cirrhosis,Multiple sclerosis	12p13.31	NA	NA	NA	NA	rs1800693	0.32	0.32	0.32	0.29972	0.4254	0.123	0.281	0.3608	0.2832	0.43	0.14	0.32	0.35	0.3621	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.277467	1.277467	NA	0.405116	0.353382	NA	0.304	CLINSIG=other;CLNDBN=Multiple_sclerosis\x2c_susceptibility_to\x2c_5;CLNREVSTAT=single;CLNACC=RCV000030698.3;CLNDSDB=MedGen:OMIM;CLNDSDBID=CN143709:614810	4.807384
1171	14	69818891	69818891	G	A	UTR3	GALNT16	NM_001168368:c.*6G>A	NA	NA	UTR3	ENSG00000100626	ENST00000448469:c.*6G>A	NA	NA	Score=472;Name=lod=110	NA	14q24.1	NA	NA	NA	NA	rs76571673	0.1	0.1	0.106	0.0916534	0.2117	0.0079	0.0994	0.0197	0.1462	0.21	0.01	0.13	0.02	0.1403	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.654364	2.654364	NA	0.17407	0.056741	NA	0.109	NA	4.8072634
1171	1	100715454	100715454	G	A	upstream	DBT	NA	NA	NA	upstream;downstream	ENSG00000137992;ENSG00000230287	NA	NA	NA	NA	NA	1p21.2	NA	Name=GTF2F1_(RAP-74),IRF1,CHD2_(N-1250),TBP,SRF,Oct-2,NF-YB,ELF1_(SC-631),AP-2gamma,NFKB,HEY1,c-Fos,GATA-2,Pol2-4H8,Sin3Ak-20,YY1_(C-20),TAF7_(SQ-8),YY1,Egr-1,Pol2,NRSF,SP1,RFX5_(N-494),GABP,POU2F2,NF-YA,GATA-1,Pol2(b),TAF1	Name=148	NA	rs3806235	0.76	0.76	0.722	0.72504	0.8598	0.9216	0.866	0.3222	0.8282	0.85	0.94	0.85	0.36	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.305247	NA	NA	NA	NA	NA	0.754	NA	4.8068666
1171	7	150648198	150648198	A	G	exonic	KCNH2	NA	synonymous SNV	KCNH2:NM_001204798:exon4:c.T936C:p.Y312Y,KCNH2:NM_172057:exon4:c.T936C:p.Y312Y,KCNH2:NM_000238:exon8:c.T1956C:p.Y652Y,KCNH2:NM_172056:exon8:c.T1956C:p.Y652Y	exonic	ENSG00000055118	NA	synonymous SNV	ENSG00000055118:ENST00000330883:exon4:c.T936C:p.Y312Y,ENSG00000055118:ENST00000392968:exon6:c.T1668C:p.Y556Y,ENSG00000055118:ENST00000262186:exon8:c.T1956C:p.Y652Y,ENSG00000055118:ENST00000430723:exon8:c.T1956C:p.Y652Y	Score=621;Name=lod=447	NA	7q36.1	NA	NA	NA	NA	rs1137617	0.76	0.76	0.763	0.772165	0.6044	0.8819	0.6383	0.9448	0.6933	0.6	0.88	0.68	0.92	0.6658	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.514819	NA	NA	0.589767	0.886972	NA	0.761	NA	4.8066996
1171	1	152384759	152384759	A	G	intronic	CRNN	NA	NA	NA	ncRNA_intronic	ENSG00000227415	NA	NA	NA	NA	NA	1q21.3	Score=845;Name=V$ZID_01	NA	NA	NA	rs7521839	0.28	0.28	0.251	0.307907	0.1491	0.4325	0.389	0.2791	0.3241	0.15	0.45	0.31	0.25	0.2226	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.026019	NA	NA	0.155	0.234907	NA	0.232	NA	4.8066333
1171	3	189884793	189884793	G	A	intergenic	LEPREL1,CLDN1	dist=44567;dist=138697	NA	NA	ncRNA_exonic	ENSG00000238077	NA	NA	NA	Score=619;Name=lod=436	NA	3q28	NA	NA	NA	NA	rs73190503	0.13	0.13	0.102	0.105831	0.1938	0.0288	0.2392	0.0499	0.0757	0.2	0.02	0.23	0.06	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.253633	NA	NA	NA	NA	NA	0.181	NA	4.8062
1171	4	130057995	130057995	T	C	intergenic	C4orf33,NONE	dist=24152;dist=NONE	NA	NA	ncRNA_intronic	ENSG00000248958	NA	NA	NA	Score=793;Name=lod=2219	NA	4q28.2	NA	NA	NA	NA	rs17014246	0.2	0.2	0.172	0.190695	0.1938	0.3095	0.2939	0.0212	0.2209	0.2	0.33	0.25	0.02	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.580775	NA	NA	NA	NA	NA	0.167	NA	4.8062
1171	8	29885635	29885635	A	G	intergenic	MIR3148,MIR548O2	dist=70771;dist=34623	NA	NA	ncRNA_exonic	ENSG00000254013	NA	NA	NA	Score=798;Name=lod=2339	NA	8p12	NA	NA	NA	NA	rs10090849	0.24	0.24	0.253	0.239816	0.1938	0.2976	0.1441	0.3374	0.1636	0.2	0.3	0.13	0.34	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.440195	NA	NA	NA	NA	ID=COSN168303;OCCURENCE=1(ovary),1(urinary_tract),1(liver),3(large_intestine)	0.181	NA	4.8062
1171	19	13345657	13345657	C	A	intronic	CACNA1A	NA	NA	NA	intronic	ENSG00000141837	NA	NA	NA	NA	NA	19p13.2	NA	Name=CTCF_(SC-5916),STAT3,Pol2-4H8,ZNF263,CTCF,Rad21,SMC3_(ab9263)	NA	NA	rs3765012	0.34	0.34	0.327	0.354832	0.1938	0.6935	0.2839	0.2716	0.3344	0.19	0.68	0.27	0.24	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.449184	NA	NA	NA	NA	NA	0.283	NA	4.8062
1171	8	59548110	59548110	G	A	intronic	NSMAF	NA	NA	NA	intronic	ENSG00000035681	NA	NA	NA	NA	NA	8q12.1	Score=934;Name=V$NFAT_Q6	NA	NA	NA	rs76597186	0.06	0.06	0.054	0.063099	0.0676	0.0198	0.0562	0.1203	0.0307	0.07	0.02	0.05	0.08	0.0638	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.838333	NA	NA	0.062485	0.100318	ID=COSM328231;OCCURENCE=1(pancreas)	0.058	NA	4.806115
1171	7	136849386	136849386	C	T	upstream	LOC349160	NA	NA	NA	ncRNA_intronic	ENSG00000234352	NA	NA	NA	NA	NA	7q33	NA	Name=GABP	NA	NA	rs832960	0.54	0.54	0.566	0.552316	0.3608	0.6825	0.5418	0.6286	0.5194	0.37	0.69	0.49	0.65	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.646312	NA	NA	NA	NA	NA	0.355	NA	4.8058666
1171	4	89601410	89601410	A	T	intronic	HERC3	NA	NA	NA	intronic	ENSG00000138641	NA	NA	NA	NA	NA	4q22.1	Score=851;Name=V$S8_01	NA	NA	NA	rs17014449	0.09	0.09	0.088	0.142173	0.0557	0.0159	0.0389	0.2579	0.2781	0.06	0.02	0.05	0.25	0.0886	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.850941	NA	NA	0.05014	0.224342	NA	0.101	NA	4.80556
1171	5	153717233	153717233	G	A	intronic	GALNT10	NA	NA	NA	ncRNA_exonic	ENSG00000253119	NA	NA	NA	Score=363;Name=lod=40	NA	5q33.2	NA	NA	NA	NA	rs11167671	0.47	0.47	0.425	0.426518	0.5278	0.624	0.6095	0.0582	0.4867	0.54	0.64	0.55	0.08	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.876818	NA	NA	NA	NA	NA	0.377	NA	4.8055333
1171	1	59127086	59127086	G	A	exonic	MYSM1	NA	synonymous SNV	MYSM1:NM_001085487:exon18:c.C2262T:p.L754L	exonic	ENSG00000162601	NA	synonymous SNV	ENSG00000162601:ENST00000472487:exon18:c.C2262T:p.L754L	NA	NA	1p32.1	NA	NA	NA	NA	rs7523134	0.26	0.26	0.231	0.247804	0.2843	0.3095	0.2421	0.1339	0.3047	0.28	0.32	0.25	0.15	0.2821	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.066286	NA	NA	0.294998	0.173203	NA	0.225	NA	4.8052686
1171	1	146524039	146524039	A	G	intergenic	LOC728989,PRKAB2	dist=9440;dist=102646	NA	NA	ncRNA_exonic	ENSG00000225603	NA	NA	NA	Score=736;Name=lod=1309	NA	1q21.1	NA	NA	NA	NA	rs60304320	0.31	0.31	0.283	0.348043	0.1948	0.4395	0.3545	0.3222	0.4417	0.2	0.44	0.32	0.31	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.558204	NA	NA	NA	NA	NA	0.217	NA	4.8052
1171	4	85552882	85552882	G	T	intronic	CDS1	NA	NA	NA	intronic	ENSG00000163624	NA	NA	NA	NA	NA	4q21.23	NA	NA	Name=24	NA	rs41282379	0.15	0.15	0.151	0.176917	0.1948	0.1468	0.1239	0.0749	0.365	0.2	0.14	0.15	0.08	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.738173	NA	NA	NA	NA	NA	0.167	NA	4.8052
1171	22	42206084	42206084	G	C	intronic	CCDC134	NA	NA	NA	intronic	ENSG00000100147	NA	NA	NA	NA	NA	22q13.2	NA	Name=ZNF263	NA	NA	rs4512	0.16	0.16	0.108	0.156749	0.1948	0.0635	0.4107	0.0159	0.2239	0.19	0.06	0.42	0.02	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.395922	NA	NA	NA	NA	NA	0.138	NA	4.8052
1172	11	840363	840363	C	T	UTR3	POLR2L	NM_021128:c.*9G>A	NA	NA	UTR3	ENSG00000177700	ENST00000534030:c.*9G>A,ENST00000322028:c.*9G>A	NA	NA	NA	NA	11p15.5	NA	Name=Pol2	Name=39	NA	rs6591	0.42	0.42	0.383	0.358427	0.5308	0.1974	0.6023	0.3797	0.1452	0.53	0.23	0.59	0.36	0.4653	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.664215	NA	NA	0.532457	0.39537	NA	0.435	NA	4.8047764
1172	3	142133144	142133144	A	C	intronic	XRN1	NA	NA	NA	intronic	ENSG00000114127	NA	NA	NA	Score=243;Name=lod=13	NA	3q23	NA	NA	NA	NA	rs9813698	0.03	0.03	0.023	0.0279553	0.0666	NA	0.0231	NA	0.0583	0.08	NA	0.02	NA	0.0562	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.097539	3.097539	NA	0.072674	0.014753	NA	0.043	NA	4.804526
1172	2	220330804	220330804	T	C	UTR3	SPEG	NM_001173476:c.*18T>C	NA	NA	UTR3	ENSG00000072195	ENST00000396698:c.*18T>C,ENST00000396695:c.*18T>C,ENST00000396688:c.*18T>C,ENST00000396686:c.*18T>C,ENST00000396689:c.*18T>C	NA	NA	Score=680;Name=lod=770	NA	2q35	Score=945;Name=V$E47_01	NA	NA	NA	rs1567487	0.48	0.48	0.421	0.459665	0.5159	0.6746	0.4971	0.211	0.4898	0.5	0.66	0.5	0.24	0.5079	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.536297	1.536297	NA	0.505063	0.231343	NA	0.326	NA	4.8044704
1172	6	32629737	32629737	C	T	intronic	HLA-DQB1	NA	NA	NA	ncRNA_intronic	ENSG00000241287	NA	NA	NA	NA	NA	6p21.32	NA	Name=Pol2-4H8	NA	NA	rs9273912	0.18	0.18	0.167	0.205072	0.1909	0.2331	0.1484	0.2201	0.2106	0.19	0.14	0.17	0.22	0.181	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.238223	1.238223	NA	0.157053	0.184778	NA	0.167	NA	4.8043803
1172	21	40250766	40250766	G	A	intergenic	ETS2,PSMG1	dist=53888;dist=296606	NA	NA	ncRNA_exonic	ENSG00000205622	NA	NA	NA	NA	NA	21q22.2	NA	Name=CEBPB,STAT3	Name=27	NA	rs1569306	NA	NA	NA	0.658347	0.5716	0.6657	0.6873	0.5968	0.8027	NA	NA	NA	NA	0.6241	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.353395	NA	NA	NA	NA	NA	0.616	NA	4.8043
1172	19	9296664	9296664	T	C	exonic	OR7D2	NA	synonymous SNV	OR7D2:NM_175883:exon1:c.T207C:p.V69V	exonic	ENSG00000188000	NA	synonymous SNV	ENSG00000188000:ENST00000344248:exon1:c.T207C:p.V69V	NA	NA	19p13.2	NA	NA	NA	NA	rs56246934	0.23	0.23	0.209	0.226837	0.3012	0.2768	0.2003	0.0787	0.318	0.29	0.28	0.21	0.09	0.2625	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.593219	NA	NA	0.298721	0.111439	NA	0.268	NA	4.8042456
1172	6	29912368	29912368	C	T	exonic	HLA-A	NA	synonymous SNV	HLA-A:NM_001242758:exon5:c.C987T:p.A329A,HLA-A:NM_002116:exon5:c.C987T:p.A329A	exonic	ENSG00000206503	NA	synonymous SNV	ENSG00000206503:ENST00000376806:exon5:c.C987T:p.A329A,ENSG00000206503:ENST00000376809:exon5:c.C987T:p.A329A,ENSG00000206503:ENST00000396634:exon7:c.C987T:p.A329A	NA	NA	6p22.1	NA	Name=Pol2,Pol2-4H8	NA	NA	rs1141891	0.69	0.69	0.66	0.683107	0.6322	0.6885	0.7723	0.7216	0.6145	0.61	0.72	0.73	0.72	0.6497	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.832736	1.832736	NA	0.580562	0.669536	NA	0.261	NA	4.8042046
1172	1	22175031	22175031	G	T	intronic	HSPG2	NA	NA	NA	intronic	ENSG00000142798	NA	NA	NA	NA	NA	1p36.12	Score=942;Name=V$FOXJ2_01	NA	NA	NA	rs6426726	0.23	0.23	0.184	0.21905	0.1958	0.1915	0.33	0.2405	0.1636	0.21	0.19	0.32	0.23	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.162449	NA	NA	NA	NA	NA	0.283	NA	4.8042
1172	1	168513067	168513067	C	A	intronic	XCL2	NA	NA	NA	intronic	ENSG00000143185	NA	NA	NA	NA	NA	1q24.2	Score=810;Name=V$PPARG_03	NA	NA	NA	rs61801330	0.18	0.18	0.191	0.206669	0.1958	0.0298	0.1599	0.3986	0.1738	0.19	0.02	0.17	0.37	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.357893	NA	NA	NA	NA	NA	0.13	NA	4.8042
1172	7	55327599	55327599	A	G	intergenic	EGFR,LANCL2	dist=52568;dist=105542	NA	NA	ncRNA_exonic	ENSG00000230564	NA	NA	NA	Score=751;Name=lod=1510	NA	7p11.2	NA	NA	NA	NA	rs7787331	0.32	0.32	0.335	0.350839	0.1958	0.2351	0.1859	0.7239	0.2423	0.19	0.24	0.21	0.7	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.293157	NA	NA	NA	NA	NA	0.37	NA	4.8042
1172	7	808810	808810	C	G	intronic	HEATR2	NA	NA	NA	exonic	ENSG00000164818	NA	nonsynonymous SNV	ENSG00000164818:ENST00000403952:exon1:c.C26G:p.A9G	NA	NA	7p22.3	NA	NA	Name=40	NA	rs6946758	0.42	0.42	0.408	0.392971	0.4632	0.3532	0.4395	0.3389	0.4018	0.45	0.35	0.43	0.43	0.4447	0.46	0.6	T	0.171	B	0.021	B	.	.	1.000	P	.	.	0.37	T	-0.917	T	0.000	T	0.056	-0.541	1.543	-0.451	-0.253	-0.400	.	-0.541184	NA	0.77	0.455254	0.332192	NA	0.384	NA	4.8035127
1172	6	160479882	160479882	G	A	intronic	IGF2R	NA	NA	NA	intronic	ENSG00000197081	NA	NA	NA	NA	NA	6q25.3	Score=1000;Name=V$AML1_01	NA	NA	NA	rs2274849	0.27	0.27	0.271	0.276957	0.1968	0.3373	0.2925	0.3328	0.2106	0.19	0.36	0.29	0.29	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.645441	NA	NA	NA	NA	NA	0.348	NA	4.8032
1172	15	53229920	53229920	C	T	intergenic	ONECUT1,WDR72	dist=147711;dist=576018	NA	NA	ncRNA_exonic	ENSG00000259612	NA	NA	NA	Score=851;Name=lod=3838	NA	15q21.3	NA	NA	NA	NA	rs41520145	0.13	0.13	0.131	0.11861	0.1968	0.0248	0.17	0.1021	0.1207	0.2	0.03	0.2	0.09	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.254576	NA	NA	NA	NA	NA	0.152	NA	4.8032
1172	1	157767519	157767519	C	T	intronic	FCRL1	NA	NA	NA	intronic	ENSG00000163534	NA	NA	NA	NA	NA	1q23.1	Score=739;Name=V$PPARA_01	NA	NA	NA	rs41273453	0.03	0.03	0.027	0.0225639	0.0577	NA	0.0548	0.0038	0.0123	0.06	NA	0.06	0.0041	0.0697	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.161351	NA	NA	0.069453	0.013006	NA	0.022	NA	4.803147
1172	2	173686663	173686663	G	T	UTR5	RAPGEF4	NM_001100397:c.-30G>T	NA	NA	UTR5	ENSG00000091428	ENST00000397087:c.-30G>T	NA	NA	Score=251;Name=lod=14	NA	2q31.1	NA	NA	Name=39	NA	rs2258180	0.53	0.53	0.501	0.526957	0.4891	0.5913	0.5115	0.5045	0.5409	0.5	0.61	0.49	0.51	0.5368	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.129219	NA	NA	0.504718	0.53808	NA	0.536	NA	4.8027154
1172	19	8468337	8468337	C	T	exonic	RAB11B	NA	synonymous SNV	RAB11B:NM_004218:exon5:c.C552T:p.R184R	exonic	ENSG00000185236	NA	synonymous SNV	ENSG00000185236:ENST00000328024:exon5:c.C552T:p.R184R	NA	NA	19p13.2	NA	NA	NA	NA	rs2230876	0.33	0.33	0.328	0.330072	0.2873	0.5188	0.219	0.2632	0.3487	0.28	0.51	0.25	0.25	0.2898	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.930668	NA	NA	0.286977	0.250567	NA	0.138	NA	4.8025896
1172	1	209405753	209405753	G	A	intergenic	PLXNA2,MIR205HG	dist=988088;dist=196415	NA	NA	ncRNA_exonic	ENSG00000224540	NA	NA	NA	Score=711;Name=lod=1029	NA	1q32.2	NA	NA	NA	NA	rs2800919	0.12	0.12	0.11	0.115615	0.1978	0.0615	0.1816	0.0166	0.1738	0.2	0.06	0.17	0.02	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.386031	NA	NA	NA	NA	NA	0.072	NA	4.8022
1172	6	46172802	46172802	A	G	intergenic	ENPP5,RCAN2	dist=34085;dist=15665	NA	NA	ncRNA_exonic	ENSG00000229349	NA	NA	NA	Score=869;Name=lod=4523	NA	6p21.1	NA	NA	NA	NA	rs6903812	0.24	0.24	0.241	0.270567	0.1978	0.1974	0.2233	0.4539	0.2065	0.18	0.19	0.23	0.42	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.314956	NA	NA	NA	NA	NA	0.319	NA	4.8022
1172	11	88142353	88142353	A	G	intergenic	CTSC,GRM5	dist=71412;dist=95391	NA	NA	ncRNA_exonic	ENSG00000249489	NA	NA	NA	Score=714;Name=lod=1064	NA	11q14.2	NA	NA	NA	NA	rs16924538	0.22	0.22	0.208	0.251198	0.1978	0.3363	0.2565	0.1452	0.3579	0.21	0.28	0.25	0.16	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.083176	NA	NA	NA	NA	NA	0.268	NA	4.8022
1172	19	54161331	54161331	G	T	intergenic	DPRX,MIR512-2	dist=21068;dist=8596	NA	NA	ncRNA_exonic	ENSG00000270347	NA	NA	NA	NA	NA	19q13.42	NA	NA	Name=10	NA	rs8103535	0.18	0.18	0.161	0.189097	0.1978	0.0208	0.2046	0.295	0.1994	0.21	0.01	0.19	0.32	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.956816	NA	NA	NA	NA	NA	0.217	NA	4.8022
1172	20	18763405	18763405	A	T	intergenic	DTD1,LINC00652	dist=18845;dist=5210	NA	NA	ncRNA_exonic	ENSG00000233324	NA	NA	NA	Score=691;Name=lod=859	NA	20p11.23	NA	NA	NA	NA	rs6081370	0.16	0.16	0.172	0.223043	0.1978	0.0615	0.147	0.3283	0.3272	0.19	0.05	0.12	0.28	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.334964	NA	NA	NA	NA	NA	0.13	NA	4.8022
1172	20	18763898	18763898	C	A	intergenic	DTD1,LINC00652	dist=19338;dist=4717	NA	NA	ncRNA_exonic	ENSG00000233324	NA	NA	NA	Score=516;Name=lod=166	NA	20p11.23	NA	NA	NA	NA	rs16979644	0.16	0.16	0.159	0.220447	0.1978	0.0615	0.147	0.3275	0.3149	0.19	0.05	0.12	0.28	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.465374	NA	NA	NA	NA	NA	0.13	NA	4.8022
1172	17	61908271	61908271	C	T	exonic	PSMC5	NA	synonymous SNV	PSMC5:NM_001199163:exon7:c.C631T:p.L211L,PSMC5:NM_002805:exon7:c.C655T:p.L219L	exonic	ENSG00000087191	NA	synonymous SNV	ENSG00000087191:ENST00000579708:exon5:c.C424T:p.L142L,ENSG00000087191:ENST00000581882:exon6:c.C631T:p.L211L,ENSG00000087191:ENST00000582130:exon6:c.C598T:p.L200L,ENSG00000087191:ENST00000310144:exon7:c.C655T:p.L219L,ENSG00000087191:ENST00000375812:exon7:c.C631T:p.L211L,ENSG00000087191:ENST00000584320:exon7:c.C631T:p.L211L,ENSG00000087191:ENST00000580864:exon8:c.C631T:p.L211L,ENSG00000087191:ENST00000581842:exon8:c.C631T:p.L211L,ENSG00000087191:ENST00000585123:exon8:c.C631T:p.L211L	Score=603;Name=lod=377	NA	17q23.3	NA	NA	NA	NA	rs968719	0.68	0.68	0.691	0.732628	0.5984	0.5556	0.6816	0.9788	0.7566	0.6	0.58	0.64	0.97	0.6598	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.72089	NA	NA	0.606395	0.91103	NA	0.681	NA	4.8020716
1172	11	89391841	89391841	C	T	upstream	FOLH1B	NA	NA	NA	ncRNA_exonic	ENSG00000134612	NA	NA	NA	Score=562;Name=lod=256	NA	11q14.3	NA	NA	NA	NA	rs11018713	0.22	0.22	0.123	0.207468	0.3648	0.0873	0.2277	0.1346	0.2536	0.34	0.09	0.27	0.15	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.179886	2.179886	NA	NA	NA	NA	0.159	NA	4.8018666
1172	6	157720414	157720414	C	G	intronic	TMEM242	NA	NA	NA	ncRNA_exonic	ENSG00000217783	NA	NA	NA	Score=340;Name=lod=32	NA	6q25.3	NA	NA	NA	NA	rs4401691	0.73	0.73	0.741	0.770567	0.5318	0.9544	0.7219	0.8026	0.818	0.53	0.96	0.69	0.79	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.386739	NA	NA	NA	NA	NA	0.645	NA	4.8015333
1172	9	73255432	73255432	G	C	intronic	TRPM3	NA	NA	NA	intronic	ENSG00000083067	NA	NA	NA	Score=295;Name=lod=21	NA	9q21.12	NA	Name=CTCF_(SC-5916),SMC3_(ab9263),CTCF	Name=126	NA	rs1538669	0.63	0.63	0.61	0.595248	0.7425	0.6845	0.6801	0.3192	0.6646	0.73	0.7	0.72	0.34	0.7083	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.054437	NA	NA	0.747848	0.38238	NA	0.594	NA	4.801352
1172	10	27475444	27475444	T	C	exonic	MASTL	NA	synonymous SNV	MASTL:NM_001172304:exon11:c.T2502C:p.T834T,MASTL:NM_001172303:exon12:c.T2619C:p.T873T,MASTL:NM_032844:exon12:c.T2616C:p.T872T	exonic	ENSG00000120539	NA	synonymous SNV	ENSG00000120539:ENST00000342386:exon11:c.T2502C:p.T834T,ENSG00000120539:ENST00000375940:exon12:c.T2619C:p.T873T,ENSG00000120539:ENST00000375946:exon12:c.T2616C:p.T872T	NA	NA	10p12.1	Score=916;Name=V$LMO2COM_02	NA	NA	NA	rs10741130	0.52	0.52	0.509	0.510982	0.6103	0.4563	0.5231	0.5295	0.4315	0.6	0.41	0.55	0.52	0.5971	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.588614	NA	NA	0.658023	0.561961	NA	0.514	NA	4.8012436
1172	5	31538249	31538249	C	T	intronic	C5orf22	NA	NA	NA	intronic	ENSG00000082213	NA	NA	NA	NA	NA	5p13.3	NA	NA	Name=36	NA	rs10071110	0.19	0.19	0.173	0.194089	0.1988	0.0903	0.2363	0.267	0.1677	0.2	0.06	0.26	0.26	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.380358	NA	NA	NA	NA	NA	0.152	NA	4.8012
1172	6	138028152	138028152	C	T	intergenic	OLIG3,LOC100130476	dist=212621;dist=116655	NA	NA	ncRNA_exonic	ENSG00000220412	NA	NA	NA	Score=787;Name=lod=2101	NA	6q23.3	NA	NA	NA	NA	rs633010	0.25	0.25	0.239	0.223043	0.1988	0.4325	0.1556	0.1543	0.1728	0.21	0.43	0.14	0.16	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.334826	NA	NA	NA	NA	NA	0.167	NA	4.8012
1172	15	79852478	79852478	C	A	intergenic	KIAA1024,MTHFS	dist=87836;dist=283411	NA	NA	ncRNA_exonic	ENSG00000259493	NA	NA	NA	Score=794;Name=lod=2243	NA	15q25.1	NA	NA	NA	NA	rs1765255	0.21	0.21	0.198	0.243211	0.1988	0.1726	0.2896	0.2269	0.3507	0.2	0.17	0.28	0.24	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.040112	NA	NA	NA	NA	NA	0.239	NA	4.8012
1172	22	16341116	16341116	C	T	intergenic	POTEH,OR11H1	dist=53179;dist=107708	NA	NA	ncRNA_exonic	ENSG00000234381	NA	NA	NA	Score=604;Name=lod=380	NA	22q11.1	NA	NA	NA	NA	rs715491	0.15	0.15	0.11	0.188698	0.1988	0.0179	0.2219	0.3048	0.1738	0.17	0.02	0.17	0.27	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.106989	NA	NA	NA	NA	NA	NA	NA	4.8012
1172	1	112191191	112191191	T	A	intronic	RAP1A	NA	NA	NA	ncRNA_exonic	ENSG00000215867	NA	NA	NA	Score=259;Name=lod=15	NA	1p13.2	NA	NA	NA	NA	rs4083915	0.55	0.55	0.533	0.560503	0.5328	0.5625	0.5562	0.6135	0.5184	0.55	0.56	0.51	0.59	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.275517	NA	NA	NA	NA	NA	0.5	NA	4.8005333
1172	1	116534852	116534852	C	T	exonic	SLC22A15	NA	synonymous SNV	SLC22A15:NM_018420:exon2:c.C288T:p.S96S	exonic	ENSG00000163393	NA	synonymous SNV	ENSG00000163393:ENST00000369502:exon2:c.C288T:p.S96S,ENSG00000163393:ENST00000369503:exon2:c.C288T:p.S96S	Score=483;Name=lod=122	NA	1p13.1	NA	NA	NA	NA	rs4046190	0.45	0.45	0.432	0.435304	0.6441	0.4196	0.4827	0.1362	0.6074	0.63	0.45	0.5	0.14	0.5994	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.600138	NA	NA	0.622874	0.201894	NA	0.543	NA	4.8002926
1172	17	39471929	39471929	G	A	UTR5	KRTAP17-1	NM_031964:c.-27C>T	NA	NA	UTR5	ENSG00000186860	ENST00000334202:c.-27C>T	NA	NA	Score=304;Name=lod=23	NA	17q21.2	NA	NA	NA	NA	rs12449671	0.2	0.2	0.194	0.188299	0.1809	0.3175	0.1354	0.1354	0.1718	0.18	0.31	0.14	0.14	0.1753	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.455664	NA	NA	0.176881	0.12124	NA	0.145	NA	4.8002524
1172	3	148863395	148863395	T	G	intronic	HPS3	NA	NA	NA	intronic	ENSG00000163755	NA	NA	NA	NA	NA	3q24	NA	NA	Name=4	NA	rs11715291	0.25	0.25	0.243	0.277756	0.1998	0.1706	0.2363	0.4546	0.2587	0.2	0.15	0.24	0.45	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.1273	NA	NA	NA	NA	NA	0.297	NA	4.8002
1172	10	3160913	3160913	G	A	intronic	PFKP	NA	NA	NA	intronic	ENSG00000067057	NA	NA	NA	NA	NA	10p15.2	NA	Name=Pol2	NA	NA	rs3829912	0.27	0.27	0.263	0.243011	0.1998	0.3849	0.2046	0.2693	0.1329	0.2	0.4	0.23	0.26	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.436232	NA	NA	NA	NA	NA	0.217	NA	4.8002
1172	14	51171922	51171922	G	A	intergenic	SAV1,NIN	dist=36851;dist=14559	NA	NA	ncRNA_exonic	ENSG00000258491	NA	NA	NA	Score=727;Name=lod=1199	NA	14q22.1	NA	NA	NA	NA	rs72681673	0.21	0.21	NA	0.204872	0.1998	0.1478	0.1614	0.3071	0.1616	0.2	0.16	0.21	0.32	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.571492	NA	NA	NA	NA	NA	0.283	NA	4.8002
1172	17	3422077	3422077	G	A	exonic	TRPV3	NA	synonymous SNV	TRPV3:NM_001258205:exon15:c.C1878T:p.S626S,TRPV3:NM_145068:exon15:c.C1878T:p.S626S	exonic	ENSG00000167723	NA	synonymous SNV	ENSG00000167723:ENST00000301365:exon15:c.C1878T:p.S626S,ENSG00000167723:ENST00000572519:exon15:c.C1878T:p.S626S,ENSG00000167723:ENST00000576742:exon15:c.C1878T:p.S626S	NA	NA	17p13.2	NA	NA	NA	NA	rs12946883	0.29	0.29	0.296	0.327676	0.2873	0.3333	0.2478	0.3427	0.3998	0.26	0.32	0.26	0.34	0.3045	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.117394	2.117394	NA	0.275	0.339537	ID=COSM148151;OCCURENCE=1(stomach)	0.413	NA	4.7998666
1172	6	47654742	47654742	A	T	exonic	GPR111	NA	synonymous SNV	GPR111:NM_153839:exon8:c.A1878T:p.L626L	exonic	ENSG00000164393	NA	synonymous SNV	ENSG00000164393:ENST00000398742:exon6:c.A1878T:p.L626L,ENSG00000164393:ENST00000467205:exon8:c.A1878T:p.L626L	Score=546;Name=lod=220	NA	6p12.3	NA	NA	NA	NA	rs9296573	0.48	0.48	0.482	0.517173	0.6262	0.3085	0.4337	0.4637	0.7515	0.62	0.3	0.49	0.47	0.5944	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.046955	NA	NA	0.646252	0.465959	NA	0.42	NA	4.7998146
1172	12	31135478	31135478	T	C	exonic	TSPAN11	NA	synonymous SNV	TSPAN11:NM_001080509:exon6:c.T468C:p.C156C	exonic	ENSG00000110900	NA	synonymous SNV	ENSG00000110900:ENST00000535215:exon5:c.T255C:p.C85C,ENSG00000110900:ENST00000544427:exon5:c.T438C:p.C146C,ENSG00000110900:ENST00000261177:exon6:c.T468C:p.C156C,ENSG00000110900:ENST00000546076:exon6:c.T468C:p.C156C	Score=501;Name=lod=145	NA	12p11.21	NA	NA	Name=6	NA	rs35089	0.95	0.95	0.948	0.951478	0.9523	0.9673	0.9481	0.9425	0.9489	0.95	0.97	0.94	0.93	0.9573	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.397652	NA	NA	0.957296	0.944369	ID=COSM431013;OCCURENCE=1(breast)	0.942	NA	4.7997706
1172	14	75130235	75130235	T	G	UTR3	AREL1	NM_001039479:c.*188A>C	NA	NA	UTR3	ENSG00000119682	ENST00000554070:c.*188A>C,ENST00000356357:c.*188A>C,ENST00000555330:c.*1035A>C	NA	NA	NA	NA	14q24.3	Score=1000;Name=V$AML1_01	NA	NA	NA	rs1045430	0.39	0.39	0.38	0.341454	0.5338	0.5387	0.4265	0.0257	0.3067	0.54	0.5	0.41	0.04	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.797863	1.797863	NA	NA	NA	NA	0.471	NA	4.7995334
1172	1	20853195	20853195	C	A	intergenic	MUL1,FAM43B	dist=18521;dist=25737	NA	NA	ncRNA_exonic	ENSG00000215520	NA	NA	NA	Score=500;Name=lod=143	NA	1p36.12	NA	NA	NA	NA	rs476622	0.11	0.11	0.1	0.0824681	0.2008	0.001	0.1052	0.0666	0.0501	0.2	NA	0.13	0.07	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.479404	NA	NA	NA	NA	NA	0.145	NA	4.7992
1172	1	232581667	232581667	G	T	intronic	SIPA1L2	NA	NA	NA	intronic	ENSG00000116991	NA	NA	NA	NA	NA	1q42.2	NA	NA	Name=16	NA	rs12723697	0.12	0.12	0.116	0.106629	0.2008	0.002	0.1671	0.0908	0.0961	0.18	NA	0.17	0.11	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.930901	NA	NA	NA	NA	NA	0.181	NA	4.7992
1172	2	17566856	17566856	C	T	intergenic	FAM49A,RAD51AP2	dist=719722;dist=125130	NA	NA	ncRNA_exonic	ENSG00000236348	NA	NA	NA	Score=845;Name=lod=3616	NA	2p24.2	NA	NA	NA	NA	rs11688807	0.09	0.09	0.088	0.105631	0.2008	0.0139	0.0879	0.0166	0.2352	0.18	0.01	0.1	0.03	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.427679	NA	NA	NA	NA	NA	0.13	NA	4.7992
1172	2	17567398	17567398	C	T	intergenic	FAM49A,RAD51AP2	dist=720264;dist=124588	NA	NA	ncRNA_exonic	ENSG00000236348	NA	NA	NA	Score=845;Name=lod=3616	NA	2p24.2	NA	NA	NA	NA	rs6746827	0.1	0.1	0.107	0.119808	0.2008	0.0139	0.0893	0.0696	0.2352	0.18	0.01	0.1	0.08	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.244832	NA	NA	NA	NA	NA	0.13	NA	4.7992
1172	6	166478324	166478324	G	A	intergenic	LINC00602,T	dist=75221;dist=92822	NA	NA	ncRNA_exonic	ENSG00000216624	NA	NA	NA	Score=815;Name=lod=2724	NA	6q27	NA	NA	NA	NA	rs12192461	0.14	0.14	0.116	0.133986	0.2008	0.0685	0.1916	0.0741	0.1728	0.21	0.07	0.19	0.07	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.351998	NA	NA	NA	NA	NA	0.138	NA	4.7992
1172	11	59259846	59259846	C	T	intergenic	OR4D10,OR4D11	dist=14008;dist=11203	NA	NA	ncRNA_exonic	ENSG00000204989	NA	NA	NA	Score=440;Name=lod=82	NA	11q12.1	NA	NA	NA	NA	rs3862659	0.19	0.19	0.163	0.175719	0.2008	0.2351	0.33	0.0098	0.2035	0.2	0.27	0.28	0.01	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.640041	NA	NA	NA	NA	NA	0.138	NA	4.7992
1172	15	96985552	96985552	G	A	intergenic	NR2F2,SPATA8	dist=102060;dist=341127	NA	NA	ncRNA_intronic	ENSG00000259312	NA	NA	NA	NA	NA	15q26.2	NA	NA	Name=2	NA	rs34176157	0.36	0.36	0.335	0.398363	0.2008	0.4891	0.3905	0.5439	0.317	0.19	0.48	0.35	0.47	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.027443	NA	NA	NA	NA	NA	0.312	NA	4.7992
1172	21	22664619	22664619	T	A	intronic	NCAM2	NA	NA	NA	intronic	ENSG00000154654	NA	NA	NA	NA	NA	21q21.1	NA	Name=p300	NA	NA	rs60892739	0.18	0.18	0.158	0.183706	0.2008	0.0764	0.1729	0.2776	0.1575	0.2	0.08	0.19	0.25	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.325034	NA	NA	NA	NA	ID=COSN166623;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.167	NA	4.7992
1172	22	38307909	38307909	T	C	intronic	MICALL1	NA	NA	NA	intronic	ENSG00000100139	NA	NA	NA	NA	NA	22q13.1	NA	Name=ZNF263	Name=6	NA	rs6519091	0.37	0.37	0.349	0.362819	0.4115	0.1766	0.379	0.4478	0.3783	0.42	0.18	0.41	0.47	0.3881	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.410699	NA	NA	0.401977	0.424648	NA	0.384	NA	4.798423
1172	19	2396556	2396556	C	T	exonic	TMPRSS9	NA	synonymous SNV	TMPRSS9:NM_182973:exon2:c.C162T:p.G54G	exonic	ENSG00000178297	NA	synonymous SNV	ENSG00000178297:ENST00000332578:exon2:c.C162T:p.G54G	NA	NA	19p13.3	NA	NA	NA	NA	rs7252886	0.41	0.41	0.398	0.430711	0.2306	0.504	0.464	0.5696	0.3497	0.24	0.53	0.41	0.54	0.3909	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.722026	NA	NA	0.24686	0.528824	NA	0.435	NA	4.7983066
1172	1	146522686	146522686	C	T	intergenic	LOC728989,PRKAB2	dist=8087;dist=103999	NA	NA	ncRNA_exonic	ENSG00000225603	NA	NA	NA	Score=638;Name=lod=523	NA	1q21.1	NA	NA	NA	NA	rs522558	0.3	0.3	0.268	0.337061	0.2018	0.3909	0.4049	0.2943	0.4305	0.2	0.38	0.36	0.29	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.447833	NA	NA	NA	NA	NA	0.217	NA	4.7982
1172	2	198244598	198244598	G	A	intergenic	ANKRD44,SF3B1	dist=69077;dist=12100	NA	NA	ncRNA_exonic	ENSG00000213104	NA	NA	NA	Score=496;Name=lod=138	NA	2q33.1	NA	NA	NA	NA	rs7603828	0.16	0.16	0.161	0.123203	0.2018	0.2143	0.17	0.0083	0.0706	0.19	0.23	0.18	0.01	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.393706	NA	NA	NA	NA	NA	0.058	NA	4.7982
1172	3	1637916	1637916	G	A	intergenic	CNTN6,CNTN4	dist=192638;dist=502634	NA	NA	ncRNA_exonic	ENSG00000184423	NA	NA	NA	Score=747;Name=lod=1442	NA	3p26.3	NA	NA	NA	NA	rs12497384	0.1	0.1	0.089	0.0838658	0.2018	NA	0.147	0.0492	0.0511	0.19	NA	0.16	0.05	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.12548	NA	NA	NA	NA	NA	0.138	NA	4.7982
1172	3	9839182	9839182	T	C	intronic	ARPC4,ARPC4-TTLL3	NA	NA	NA	intronic	ENSG00000241553,ENSG00000250151	NA	NA	NA	NA	NA	3p25.3	NA	NA	Name=11	NA	rs4686371	0.3	0.3	0.285	0.298522	0.2018	0.5278	0.2939	0.171	0.3374	0.2	0.52	0.3	0.18	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.66395	NA	NA	NA	NA	NA	0.261	NA	4.7982
1172	11	58605673	58605673	T	C	intronic	GLYATL2	NA	NA	NA	intronic	ENSG00000156689	NA	NA	NA	NA	NA	11q12.1	NA	Name=PU.1	NA	NA	rs11229655	0.31	0.31	0.279	0.336262	0.2018	0.4841	0.3242	0.2958	0.3855	0.23	0.46	0.27	0.28	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.54288	NA	NA	NA	NA	ID=COSN163961;OCCURENCE=1(NS)	0.261	NA	4.7982
1172	1	9416346	9416346	C	T	exonic	SPSB1	NA	synonymous SNV	SPSB1:NM_025106:exon2:c.C396T:p.L132L	exonic	ENSG00000171621	NA	synonymous SNV	ENSG00000171621:ENST00000377399:exon1:c.C396T:p.L132L,ENSG00000171621:ENST00000328089:exon2:c.C396T:p.L132L,ENSG00000171621:ENST00000357898:exon2:c.C396T:p.L132L,ENSG00000171621:ENST00000450402:exon2:c.C396T:p.L132L	NA	NA	1p36.22	NA	NA	NA	NA	rs3795309	0.24	0.24	0.221	0.197085	0.3161	0.2798	0.1758	0.0651	0.183	0.33	0.28	0.2	0.07	0.2535	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.214669	NA	NA	0.298953	0.096686	NA	0.188	NA	4.7981136
1172	9	33625185	33625185	C	T	ncRNA_exonic	ANXA2P2	NA	NA	NA	ncRNA_exonic	ENSG00000231991	NA	NA	NA	Score=667;Name=lod=687	NA	9p13.3	NA	NA	NA	NA	rs36079164	0.4	0.4	0.324	0.385783	0.4443	0.5268	0.4611	0.0855	0.5327	0.46	0.53	0.48	0.09	0.4243	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.697737	2.697737	NA	NA	NA	NA	0.275	NA	4.7980666
1172	10	18816633	18816633	C	T	intronic	CACNB2	NA	NA	NA	ncRNA_intronic	ENSG00000240291	NA	NA	NA	NA	NA	10p12.31	NA	NA	Name=21	NA	rs4314963	0.22	0.22	0.199	0.239417	0.16	0.251	0.3372	0.1891	0.3078	0.18	0.27	0.31	0.16	0.215	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.38145	NA	NA	0.160349	0.204267	ID=COSM146898;OCCURENCE=1(stomach)	0.152	NA	4.7979843
1172	17	45695832	45695832	C	T	intronic	NPEPPS	NA	NA	NA	ncRNA_intronic	ENSG00000263766	NA	NA	NA	NA	NA	17q21.32	NA	Name=CTCF	Name=42	NA	rs3760370	0.48	0.48	0.477	0.457468	0.5249	0.5565	0.5634	0.2284	0.5204	0.53	0.54	0.52	0.3	0.5088	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.210079	NA	NA	0.502192	0.289013	NA	0.486	NA	4.7974413
1172	2	220549123	220549123	A	C	intergenic	SLC4A3,MIR4268	dist=42421;dist=222100	NA	NA	ncRNA_exonic	ENSG00000231802	NA	NA	NA	Score=618;Name=lod=434	NA	2q35	NA	NA	NA	NA	rs34364745	0.15	0.15	0.113	0.147165	0.2028	0.0377	0.2248	0.1604	0.1299	0.2	0.04	0.2	0.16	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.605058	NA	NA	NA	NA	NA	0.109	NA	4.7972
1172	3	133661352	133661352	G	T	intronic	SLCO2A1	NA	NA	NA	intronic	ENSG00000174640	NA	NA	NA	NA	NA	3q22.1	NA	NA	Name=10	NA	rs3923834	0.2	0.2	0.162	0.182708	0.2028	0.2897	0.2133	0.0333	0.2321	0.22	0.27	0.22	0.04	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.149619	NA	NA	NA	NA	NA	0.109	NA	4.7972
1172	9	30773722	30773722	T	C	intergenic	LOC401497,ACO1	dist=365270;dist=1610879	NA	NA	ncRNA_exonic	ENSG00000235626	NA	NA	NA	Score=524;Name=lod=179	NA	9p21.1	NA	NA	NA	NA	rs300541	0.27	0.27	0.242	0.280152	0.2028	0.3294	0.2363	0.3533	0.2413	0.21	0.34	0.23	0.31	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.072711	NA	NA	NA	NA	NA	0.225	NA	4.7972
1172	13	79484248	79484248	C	G	intergenic	LINC00331,RBM26	dist=70063;dist=409852	NA	NA	ncRNA_exonic	ENSG00000230584	NA	NA	NA	Score=851;Name=lod=3844	NA	13q31.1	NA	NA	NA	NA	rs9318597	0.13	0.13	0.11	0.118011	0.2028	0.0734	0.1398	0.0893	0.1002	0.2	0.06	0.15	0.09	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.908338	NA	NA	NA	NA	NA	0.065	NA	4.7972
1172	13	113833221	113833221	A	G	intronic	PCID2	NA	NA	NA	intronic	ENSG00000126226	NA	NA	NA	NA	NA	13q34	NA	NA	Name=17	NA	rs9549352	0.2	0.2	0.171	0.236022	0.2028	0.3313	0.2536	0.0129	0.4611	0.21	0.31	0.23	0.02	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.002211	NA	NA	NA	NA	NA	0.174	NA	4.7972
1172	13	113851633	113851633	A	G	intronic	PCID2	NA	NA	NA	intronic	ENSG00000126226	NA	NA	NA	NA	NA	13q34	NA	NA	Name=7	NA	rs9549356	0.2	0.2	0.171	0.235024	0.2028	0.3313	0.2536	0.0113	0.4581	0.21	0.31	0.23	0.02	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.083097	NA	NA	NA	NA	NA	0.174	NA	4.7972
1172	12	51901390	51901390	A	G	UTR3	SLC4A8	NM_001258401:c.*168A>G,NM_001039960:c.*168A>G	NA	NA	UTR3	ENSG00000050438	ENST00000453097:c.*168A>G	NA	NA	Score=278;Name=lod=18	NA	12q13.13	NA	NA	NA	NA	rs7305599	0.5	0.5	0.478	0.514976	0.5368	0.4563	0.4366	0.5552	0.5542	0.53	0.46	0.5	0.5	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.265592	NA	NA	NA	NA	NA	0.594	NA	4.7965334
1172	6	112528481	112528481	A	G	intronic	LAMA4	NA	NA	NA	intronic	ENSG00000112769	NA	NA	NA	NA	NA	6q21	NA	NA	Name=16	NA	rs2239849	0.43	0.43	0.456	0.465256	0.2038	0.5863	0.2925	0.739	0.362	0.19	0.58	0.31	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.242441	NA	NA	NA	NA	NA	0.399	NA	4.7962
1172	8	70855625	70855625	C	T	intergenic	SLCO5A1,PRDM14	dist=108326;dist=108261	NA	NA	ncRNA_exonic	ENSG00000247570	NA	NA	NA	Score=630;Name=lod=483	NA	8q13.3	NA	NA	NA	NA	rs59775679	0.16	0.16	0.145	0.173123	0.2038	0.0962	0.219	0.112	0.271	0.18	0.13	0.21	0.13	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.322521	2.322521	NA	NA	NA	NA	0.181	NA	4.7962
1172	8	70855638	70855638	T	C	intergenic	SLCO5A1,PRDM14	dist=108339;dist=108248	NA	NA	ncRNA_exonic	ENSG00000247570	NA	NA	NA	Score=630;Name=lod=483	NA	8q13.3	NA	NA	NA	NA	rs57729150	0.16	0.16	0.15	0.173123	0.2038	0.0962	0.219	0.112	0.271	0.18	0.13	0.21	0.13	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.119179	2.119179	NA	NA	NA	NA	0.181	NA	4.7962
1172	17	29646032	29646032	G	A	exonic	EVI2A	NA	synonymous SNV	EVI2A:NM_001003927:exon3:c.C69T:p.S23S	exonic	ENSG00000126860	NA	synonymous SNV	ENSG00000126860:ENST00000247270:exon3:c.C69T:p.S23S	NA	NA	17q11.2	NA	NA	Name=8	NA	rs1129506	0.6	0.6	0.61	0.591853	0.6372	0.4474	0.4625	0.7156	0.6186	0.65	0.48	0.51	0.72	0.5966	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.437338	NA	NA	0.637093	0.722651	NA	0.572	NA	4.7957736
1172	15	75685175	75685175	A	C	intronic	SIN3A	NA	NA	NA	intronic	ENSG00000169375	NA	NA	NA	NA	NA	15q24.2	Score=873;Name=V$FOXJ2_02	NA	NA	NA	rs71401694	0.08	0.08	0.072	0.0688898	0.0676	0.128	0.0605	0.003	0.1043	0.07	0.15	0.07	0.01	0.0721	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.539458	NA	NA	0.064741	0.010241	NA	0.029	NA	4.795559
1172	9	18718345	18718345	G	A	intronic	ADAMTSL1	NA	NA	NA	ncRNA_exonic	ENSG00000236857	NA	NA	NA	Score=749;Name=lod=1470	NA	9p22.1	NA	NA	NA	NA	rs4977341	0.56	0.56	0.554	0.57528	0.5378	0.6548	0.6297	0.475	0.6288	0.54	0.63	0.59	0.51	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.659844	NA	NA	NA	NA	NA	0.667	NA	4.7955333
1172	6	25914901	25914901	G	A	intronic	SLC17A2	NA	NA	NA	intronic	ENSG00000112337	NA	NA	NA	Score=445;Name=lod=86	NA	6p22.2	Score=902;Name=V$LMO2COM_02	NA	NA	NA	rs2071298	0.43	0.43	0.38	0.40016	0.4026	0.6964	0.4568	0.143	0.3998	0.39	0.71	0.41	0.16	0.4122	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.891977	1.891977	NA	0.389767	0.185656	NA	0.246	NA	4.795433
1172	1	201858887	201858887	C	T	intronic	SHISA4	NA	NA	NA	intronic	ENSG00000198892	NA	NA	NA	NA	NA	1q32.1	NA	Name=TBP	NA	NA	rs7539696	0.19	0.19	0.191	0.210463	0.2048	0.1369	0.1628	0.2451	0.2791	0.2	0.12	0.19	0.24	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.241075	NA	NA	NA	NA	NA	0.225	NA	4.7952
1172	1	242016590	242016590	C	T	intronic	EXO1	NA	NA	NA	intronic	ENSG00000174371	NA	NA	NA	NA	NA	1q43	NA	NA	Name=2	NA	rs4149867	0.14	0.14	0.134	0.139377	0.2048	0.1458	0.121	0.0121	0.2505	0.2	0.15	0.13	0.02	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.570973	NA	NA	NA	NA	NA	0.101	NA	4.7952
1172	5	29848798	29848798	T	A	intergenic	LSP1P3,CDH6	dist=921378;dist=1344964	NA	NA	ncRNA_exonic	ENSG00000249744	NA	NA	NA	Score=452;Name=lod=92	NA	5p13.3	NA	NA	NA	NA	rs16899572	0.29	0.29	0.251	0.302516	0.2048	0.3571	0.3703	0.2035	0.4325	0.21	0.41	0.35	0.23	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.33523	NA	NA	NA	NA	NA	0.29	NA	4.7952
1172	5	29848809	29848809	T	C	intergenic	LSP1P3,CDH6	dist=921389;dist=1344953	NA	NA	ncRNA_exonic	ENSG00000249744	NA	NA	NA	Score=452;Name=lod=92	NA	5p13.3	NA	NA	NA	NA	rs72745293	0.29	0.29	0.239	0.302915	0.2048	0.3542	0.3703	0.2088	0.4305	0.21	0.41	0.35	0.23	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.765273	NA	NA	NA	NA	NA	0.29	NA	4.7952
1172	10	10216373	10216373	A	G	intergenic	NONE,SFTA1P	dist=NONE;dist=610029	NA	NA	ncRNA_exonic	ENSG00000229919	NA	NA	NA	Score=705;Name=lod=979	NA	10p14	NA	NA	NA	NA	rs10905673	0.12	0.12	0.103	0.0938498	0.2048	0.0883	0.0735	0.0265	0.091	0.22	0.1	0.08	0.04	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.240423	NA	NA	NA	NA	NA	0.123	NA	4.7952
1172	12	112915434	112915434	C	T	intronic	PTPN11	NA	NA	NA	intronic	ENSG00000179295	NA	NA	NA	NA	NA	12q24.13	NA	NA	NA	NA	rs41279090	0.04	0.04	0.038	0.0365415	0.0716	0.001	0.0663	0.0197	0.0389	0.06	0.0017	0.09	0.03	0.0592	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.846292	NA	NA	0.07407	0.023604	NA	0.072	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000033512.2;CLNDSDB=.;CLNDSDBID=.	4.79513
1173	7	131849981	131849981	A	G	intronic	PLXNA4	NA	NA	NA	intronic	ENSG00000221866	NA	NA	NA	NA	NA	7q32.3	NA	NA	Name=2	NA	rs17166207	0.14	0.14	0.148	0.172125	0.0606	0.0169	0.0836	0.4675	0.1104	0.05	0.01	0.08	0.46	0.0859	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.588274	1.588274	NA	0.058568	0.384884	NA	0.159	NA	4.794932
1173	5	129015452	129015452	T	C	intronic	ADAMTS19	NA	NA	NA	ncRNA_intronic	ENSG00000251680	NA	NA	NA	Score=603;Name=lod=376	NA	5q23.3	Score=915;Name=V$TATA_C	NA	NA	NA	rs30645	0.35	0.35	0.306	0.317692	0.5258	0.2361	0.4553	0.0825	0.408	0.54	0.2	0.48	0.13	0.4652	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.607348	1.607348	NA	0.547674	0.155924	NA	0.362	NA	4.7946593
1173	9	991114	991114	A	G	UTR3	DMRT3	NM_021240:c.*109A>G	NA	NA	UTR3	ENSG00000064218	ENST00000190165:c.*109A>G	NA	NA	Score=614;Name=lod=418	NA	9p24.3	NA	NA	NA	NA	rs279877	0.49	0.49	0.482	0.509784	0.5388	0.5724	0.4625	0.3359	0.684	0.53	0.53	0.48	0.38	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.999246	NA	NA	NA	NA	NA	0.486	NA	4.7945334
1173	7	55327748	55327748	C	T	intergenic	EGFR,LANCL2	dist=52717;dist=105393	NA	NA	ncRNA_exonic	ENSG00000230564	NA	NA	NA	Score=751;Name=lod=1510	NA	7p11.2	NA	NA	NA	NA	rs1525642	0.37	0.37	0.397	0.392372	0.2058	0.5675	0.1801	0.4856	0.4284	0.2	0.58	0.21	0.51	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.391489	NA	NA	NA	NA	NA	0.261	NA	4.7942
1173	7	56296402	56296402	A	G	intergenic	NUPR1L,LOC650226	dist=112312;dist=194995	NA	NA	ncRNA_exonic	ENSG00000227491	NA	NA	NA	Score=567;Name=lod=268	NA	7p11.2	NA	NA	NA	NA	rs1640563	0.41	0.41	0.408	0.413938	0.2058	0.6111	0.2349	0.5696	0.3415	0.22	0.62	0.27	0.56	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.474858	NA	NA	NA	NA	NA	0.391	NA	4.7942
1173	7	56296553	56296553	G	T	intergenic	NUPR1L,LOC650226	dist=112463;dist=194844	NA	NA	ncRNA_exonic	ENSG00000227491	NA	NA	NA	Score=567;Name=lod=268	NA	7p11.2	NA	NA	NA	NA	rs10235373	0.41	0.41	0.435	0.413738	0.2058	0.6111	0.2349	0.5696	0.3405	0.22	0.62	0.27	0.56	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.114047	NA	NA	NA	NA	NA	0.377	NA	4.7942
1173	7	56296598	56296598	A	G	intergenic	NUPR1L,LOC650226	dist=112508;dist=194799	NA	NA	ncRNA_exonic	ENSG00000227491	NA	NA	NA	Score=436;Name=lod=79	NA	7p11.2	NA	NA	NA	NA	rs1640564	0.41	0.41	0.426	0.413738	0.2058	0.6111	0.2349	0.5696	0.3405	0.22	0.62	0.27	0.56	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.59855	NA	NA	NA	NA	NA	0.391	NA	4.7942
1173	7	56296728	56296728	A	G	intergenic	NUPR1L,LOC650226	dist=112638;dist=194669	NA	NA	ncRNA_exonic	ENSG00000227491	NA	NA	NA	Score=796;Name=lod=2297	NA	7p11.2	NA	NA	NA	NA	rs1640565	0.41	0.41	0.427	0.413738	0.2058	0.6111	0.2349	0.5696	0.3405	0.22	0.62	0.27	0.56	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.760501	NA	NA	NA	NA	NA	0.391	NA	4.7942
1173	7	56296746	56296746	T	C	intergenic	NUPR1L,LOC650226	dist=112656;dist=194651	NA	NA	ncRNA_exonic	ENSG00000227491	NA	NA	NA	Score=796;Name=lod=2297	NA	7p11.2	NA	NA	NA	NA	rs1621849	0.41	0.41	0.425	0.413738	0.2058	0.6111	0.2349	0.5696	0.3405	0.22	0.62	0.27	0.56	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.198932	NA	NA	NA	NA	NA	0.391	NA	4.7942
1173	7	56296924	56296924	C	T	intergenic	NUPR1L,LOC650226	dist=112834;dist=194473	NA	NA	ncRNA_exonic	ENSG00000227491	NA	NA	NA	Score=796;Name=lod=2297	NA	7p11.2	NA	NA	NA	NA	rs1622932	0.41	0.41	0.419	0.413738	0.2058	0.6111	0.2349	0.5696	0.3405	0.22	0.62	0.27	0.56	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.373985	NA	NA	NA	NA	NA	0.391	NA	4.7942
1173	7	56296984	56296984	C	T	intergenic	NUPR1L,LOC650226	dist=112894;dist=194413	NA	NA	ncRNA_exonic	ENSG00000227491	NA	NA	NA	Score=796;Name=lod=2297	NA	7p11.2	NA	NA	NA	NA	rs1640566	0.41	0.41	0.432	0.413738	0.2058	0.6111	0.2349	0.5696	0.3405	0.22	0.62	0.27	0.56	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.364668	NA	NA	NA	NA	NA	0.391	NA	4.7942
1173	7	56297387	56297387	C	T	intergenic	NUPR1L,LOC650226	dist=113297;dist=194010	NA	NA	ncRNA_exonic	ENSG00000227491	NA	NA	NA	Score=796;Name=lod=2297	NA	7p11.2	NA	NA	NA	NA	rs1640567	0.41	0.41	0.43	0.413738	0.2058	0.6111	0.2349	0.5703	0.3395	0.22	0.62	0.27	0.56	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.33388	NA	NA	NA	NA	NA	0.391	NA	4.7942
1173	7	56297446	56297446	C	T	intergenic	NUPR1L,LOC650226	dist=113356;dist=193951	NA	NA	ncRNA_exonic	ENSG00000227491	NA	NA	NA	Score=796;Name=lod=2297	NA	7p11.2	NA	NA	NA	NA	rs1640568	0.41	0.41	0.391	0.413738	0.2058	0.6111	0.2349	0.5703	0.3395	0.22	0.62	0.27	0.56	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.78358	NA	NA	NA	NA	NA	0.362	NA	4.7942
1173	12	53124745	53124745	A	G	intergenic	KRT77,KRT76	dist=27498;dist=37194	NA	NA	ncRNA_exonic	ENSG00000257616	NA	NA	NA	Score=590;Name=lod=333	NA	12q13.13	NA	NA	NA	NA	rs10876327	0.21	0.21	0.209	0.23123	0.2058	0.0347	0.3415	0.3911	0.1656	0.21	0.02	0.31	0.37	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.682758	NA	NA	NA	NA	NA	0.254	NA	4.7942
1173	13	21790729	21790729	A	G	intergenic	MRP63,MIPEPP3	dist=37509;dist=81535	NA	NA	ncRNA_exonic	ENSG00000271250	NA	NA	NA	Score=464;Name=lod=103	NA	13q12.11	NA	NA	NA	NA	rs4338637	0.21	0.21	0.204	0.235224	0.2058	0.1577	0.1542	0.326	0.2802	0.21	0.17	0.16	0.32	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.602411	2.602411	NA	NA	NA	NA	0.29	NA	4.7942
1173	16	21071499	21071499	G	A	intronic	DNAH3	NA	NA	NA	intronic	ENSG00000158486	NA	NA	NA	NA	NA	16p12.3	NA	Name=FOXA2_(SC-6554),FOXA1_(C-20)	NA	NA	rs858205	0.29	0.29	0.315	0.264577	0.2058	0.4573	0.2161	0.2685	0.1554	0.2	0.47	0.2	0.3	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.38193	NA	NA	NA	NA	NA	0.246	NA	4.7942
1173	17	5276531	5276531	A	T	intronic	RABEP1	NA	NA	NA	intronic	ENSG00000029725,ENSG00000108559	NA	NA	NA	NA	NA	17p13.2	NA	Name=CHD2_(N-1250),MEF2C_(SC-13268),GATA3_(SC-268),MEF2A,USF2,TBP,Pbx3	NA	NA	rs3026097	0.23	0.23	0.257	0.243411	0.2058	0.1429	0.1931	0.4175	0.1861	0.21	0.15	0.19	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.367484	NA	NA	NA	NA	NA	0.333	NA	4.7942
1173	18	56205481	56205481	G	A	intronic	ALPK2	NA	NA	NA	ncRNA_exonic	ENSG00000267257	NA	NA	NA	NA	NA	18q21.32	Score=823;Name=V$RSRFC4_01	Name=EBF,Pol2-4H8	NA	NA	rs9962203	0.44	0.44	0.43	0.403754	0.5726	0.2361	0.4294	0.4297	0.3497	0.59	0.24	0.51	0.38	0.4733	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.580146	NA	NA	0.493263	0.419886	NA	0.529	NA	4.7941703
1173	15	41860411	41860411	G	A	intronic	TYRO3	NA	NA	NA	intronic	ENSG00000092445	NA	NA	NA	NA	NA	15q15.1	Score=708;Name=V$NRSF_01	Name=HEY1	NA	NA	rs7171675	0.31	0.31	0.336	0.332668	0.4245	0.0228	0.2983	0.5083	0.3446	0.42	0.02	0.31	0.48	0.3679	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.557	NA	NA	0.413488	0.496823	NA	0.435	NA	4.794112
1173	16	80718879	80718879	A	G	exonic	CDYL2	NA	synonymous SNV	CDYL2:NM_152342:exon2:c.T172C:p.L58L	exonic	ENSG00000166446	NA	synonymous SNV	ENSG00000166446:ENST00000299564:exon2:c.T172C:p.L58L,ENSG00000166446:ENST00000562812:exon2:c.T172C:p.L58L,ENSG00000166446:ENST00000563890:exon2:c.T172C:p.L58L,ENSG00000166446:ENST00000566173:exon2:c.T172C:p.L58L	Score=432;Name=lod=76	NA	16q23.2	NA	NA	NA	NA	rs8049284	0.47	0.47	0.465	0.457468	0.662	0.2867	0.4236	0.4017	0.5225	0.65	0.29	0.48	0.38	0.5514	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.975629	NA	NA	0.659302	0.463232	NA	0.565	NA	4.7939646
1173	8	125052018	125052018	T	C	ncRNA_intronic	FER1L6-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000181171,ENSG00000254249	NA	NA	NA	NA	NA	8q24.13	NA	Name=GR	NA	NA	rs4389914	0.78	0.78	0.789	0.788938	0.8728	0.6349	0.7349	0.8517	0.8149	0.86	0.65	0.75	0.85	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.897883	NA	NA	NA	NA	NA	0.891	NA	4.7938666
1173	5	35921266	35921266	G	A	intronic	CAPSL	NA	NA	NA	intronic	ENSG00000152611	NA	NA	NA	NA	NA	5p13.2	NA	Name=CTCF,CTCF_(C-20),Rad21,CTCF_(SC-5916),SMC3_(ab9263)	Name=19	NA	rs3734107	0.31	0.31	0.325	0.304313	0.4135	0.0685	0.2666	0.4728	0.2342	0.42	0.06	0.3	0.43	0.3658	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.664542	NA	NA	0.42686	0.46414	NA	0.312	NA	4.79384
1173	2	219219183	219219183	T	G	intergenic	PNKD,C2orf62	dist=7667;dist=2396	NA	NA	ncRNA_exonic	ENSG00000230580	NA	NA	NA	Score=747;Name=lod=1446	NA	2q35	NA	NA	NA	NA	rs11896513	0.06	0.06	0.048	0.0597045	0.1044	0.0347	0.0533	0.0461	0.0624	0.1	0.03	0.05	0.04	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.296004	NA	NA	0.101823	0.049855	NA	0.051	NA	4.793777
1173	11	56507880	56507880	T	C	intronic	OR8U8	NA	NA	NA	ncRNA_exonic	ENSG00000181325	NA	NA	NA	Score=265;Name=lod=16	NA	11q12.1	NA	NA	NA	NA	rs644039	NA	NA	0.612	0.645767	0.5398	0.7054	0.6715	0.6513	0.6677	NA	NA	NA	NA	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.277047	NA	NA	NA	NA	ID=COSN163955;OCCURENCE=1(breast)	0.572	NA	4.7935333
1173	1	28209305	28209305	A	G	exonic	THEMIS2	NA	synonymous SNV	THEMIS2:NM_001105556:exon4:c.A1470G:p.L490L	exonic	ENSG00000130775	NA	synonymous SNV	ENSG00000130775:ENST00000373921:exon4:c.A1470G:p.L490L,ENSG00000130775:ENST00000328928:exon5:c.A1083G:p.L361L	NA	NA	1p35.3	NA	NA	NA	NA	rs3766398	0.47	0.47	0.447	0.472444	0.6322	0.5099	0.5086	0.1445	0.6871	0.63	0.49	0.53	0.17	0.5906	0.65	.	.	.	.	.	.	.	.	0.748	P	.	.	.	.	.	.	.	.	.	0.315	5.708	1.89	0.216	-0.261	4.182	0.315067	NA	NA	0.650439	0.252642	NA	0.449	NA	4.7934276
1173	8	67365860	67365860	C	T	intronic	ADHFE1	NA	NA	NA	intronic	ENSG00000147576	NA	NA	NA	NA	NA	8q13.1	NA	Name=CTCF	NA	NA	rs7014306	0.14	0.14	0.169	0.136581	0.2068	0.002	0.1542	0.2141	0.0859	0.2	0.0017	0.16	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.094962	NA	NA	NA	NA	NA	0.159	NA	4.7932
1173	10	13100269	13100269	C	A	intergenic	CCDC3,OPTN	dist=56565;dist=41813	NA	NA	ncRNA_exonic	ENSG00000225251	NA	NA	NA	Score=779;Name=lod=1950	NA	10p13	NA	NA	NA	NA	rs9787488	0.16	0.16	0.17	0.172125	0.2068	0.2034	0.1859	0.0696	0.2331	0.19	0.21	0.15	0.07	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.52078	NA	NA	NA	NA	NA	0.123	NA	4.7932
1173	15	34532726	34532726	C	T	intronic	SLC12A6	NA	NA	NA	intronic	ENSG00000140199	NA	NA	NA	NA	NA	15q14	NA	NA	Name=6	NA	rs60604568	0.2	0.2	0.177	0.207268	0.2068	0.2837	0.2017	0.1256	0.2434	0.22	0.27	0.2	0.11	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.531231	NA	NA	NA	NA	NA	0.094	NA	4.7932
1173	1	49511248	49511248	G	A	intronic	AGBL4	NA	NA	NA	intronic	ENSG00000186094	NA	NA	NA	NA	NA	1p33	Score=890;Name=V$CEBP_C	NA	NA	NA	rs80256865	0.06	0.06	0.073	0.0477236	0.0755	0.0754	0.0187	0.0197	0.0491	0.08	0.08	0.02	0.04	0.0787	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.087887	2.087887	NA	0.052816	0.01972	NA	0.022	NA	4.792984
1173	9	18718114	18718114	A	C	intronic	ADAMTSL1	NA	NA	NA	ncRNA_exonic	ENSG00000236857	NA	NA	NA	Score=749;Name=lod=1470	NA	9p22.1	NA	NA	NA	NA	rs4977339	0.56	0.56	0.536	0.575879	0.5408	0.6558	0.6297	0.475	0.6278	0.54	0.63	0.59	0.51	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.215486	NA	NA	NA	NA	NA	0.667	NA	4.7925333
1173	9	18718186	18718186	A	G	intronic	ADAMTSL1	NA	NA	NA	ncRNA_exonic	ENSG00000236857	NA	NA	NA	Score=749;Name=lod=1470	NA	9p22.1	NA	NA	NA	NA	rs1821376	0.56	0.56	0.548	0.575879	0.5408	0.6558	0.6297	0.475	0.6278	0.54	0.63	0.59	0.51	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.655902	NA	NA	NA	NA	NA	0.667	NA	4.7925333
1173	9	18718280	18718280	A	G	intronic	ADAMTSL1	NA	NA	NA	ncRNA_exonic	ENSG00000236857	NA	NA	NA	Score=749;Name=lod=1470	NA	9p22.1	NA	NA	NA	NA	rs4977340	0.56	0.56	0.545	0.575879	0.5408	0.6558	0.6297	0.475	0.6278	0.54	0.63	0.59	0.51	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.329052	NA	NA	NA	NA	NA	0.667	NA	4.7925333
1173	19	691025	691025	C	T	intronic	PRSS57	NA	NA	NA	ncRNA_exonic	ENSG00000213726	NA	NA	NA	Score=812;Name=lod=2648	NA	19p13.3	NA	NA	NA	NA	rs8108922	0.36	0.36	0.349	0.336861	0.5408	0.2351	0.4409	0.143	0.4202	0.54	0.22	0.47	0.17	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.641113	NA	NA	NA	NA	NA	0.304	NA	4.7925333
1173	17	76422815	76422815	A	G	intronic	DNAH17	NA	NA	NA	exonic	ENSG00000268965	NA	nonsynonymous SNV	ENSG00000268965:ENST00000600087:exon1:c.A407G:p.H136R	NA	NA	17q25.3	NA	NA	NA	NA	rs72914883	0.13	0.13	0.112	0.13139	0.1809	0.0248	0.1268	0.1702	0.1411	0.18	0.03	0.14	0.17	0.1934	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.020091	NA	NA	NA	NA	NA	0.188	NA	4.7923667
1173	8	62115211	62115211	G	C	intergenic	LOC100130298,CLVS1	dist=234904;dist=85314	NA	NA	ncRNA_exonic	ENSG00000213881	NA	NA	NA	Score=578;Name=lod=298	NA	8q12.2	NA	NA	NA	NA	rs2931327	0.16	0.16	0.115	0.153155	0.2078	0.1389	0.2925	0.0144	0.2004	0.21	0.14	0.31	0.02	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.181847	NA	NA	NA	NA	NA	0.138	NA	4.7922
1173	19	42260569	42260569	G	A	exonic	CEACAM6	NA	synonymous SNV	CEACAM6:NM_002483:exon2:c.G126A:p.P42P	exonic	ENSG00000086548,ENSG00000267881	NA	synonymous SNV	ENSG00000086548:ENST00000199764:exon2:c.G126A:p.P42P,ENSG00000267881:ENST00000435837:exon2:c.G126A:p.P42P	NA	NA	19q13.2	NA	NA	NA	NA	rs1805223	0.25	0.25	0.22	0.255591	0.2873	0.2738	0.2911	0.1399	0.3354	0.29	0.25	0.3	0.16	0.2969	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.221677	NA	NA	0.29093	0.169088	ID=COSM148642;OCCURENCE=1(stomach)	0.399	NA	4.7915366
1173	19	829743	829743	G	A	intronic	AZU1	NA	NA	NA	intronic	ENSG00000172232	NA	NA	NA	Score=547;Name=lod=223	NA	19p13.3	NA	NA	NA	NA	rs4807873	0.06	0.06	0.057	0.0676917	0.0706	0.0089	0.0605	0.0779	0.1166	0.06	0.01	0.07	0.09	0.0744	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.075956	NA	NA	0.063605	0.074671	NA	0.036	NA	4.791395
1173	3	195723680	195723680	C	G	intergenic	SDHAP1,TFRC	dist=6530;dist=52475	NA	NA	ncRNA_exonic	ENSG00000231464	NA	NA	NA	Score=738;Name=lod=1327	NA	3q29	NA	NA	NA	NA	rs4927701	NA	NA	0.427	0.142572	0.2087	0.0585	0.1888	0.1573	0.1084	NA	NA	NA	NA	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.076589	NA	NA	NA	NA	NA	0.036	NA	4.7913
1173	6	57841623	57841623	A	G	intergenic	PRIM2,GUSBP4	dist=328247;dist=404536	NA	NA	ncRNA_exonic	ENSG00000215307	NA	NA	NA	Score=841;Name=lod=3494	NA	6p11.2	NA	NA	NA	NA	rs28547079	0.21	0.21	NA	0.199481	0.2087	0.0823	0.2003	0.3419	0.1176	0.21	0.1	0.22	0.34	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.671182	NA	NA	NA	NA	NA	0.203	NA	4.7913
1173	8	27823868	27823868	G	A	intronic	SCARA5	NA	NA	NA	intronic	ENSG00000168079	NA	NA	NA	NA	NA	8p21.1	NA	Name=Egr-1	NA	NA	rs2726940	0.17	0.17	0.149	0.152756	0.2087	0.1736	0.1268	0.1452	0.1022	0.19	0.18	0.14	0.13	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.449762	NA	NA	NA	NA	NA	0.123	NA	4.7913
1173	11	88141789	88141789	A	C	intergenic	CTSC,GRM5	dist=70848;dist=95955	NA	NA	ncRNA_exonic	ENSG00000249489	NA	NA	NA	Score=679;Name=lod=767	NA	11q14.2	NA	NA	NA	NA	rs12417118	0.28	0.28	0.272	0.32508	0.2087	0.3383	0.2781	0.3964	0.3681	0.22	0.28	0.27	0.38	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.405613	NA	NA	NA	NA	NA	0.37	NA	4.7913
1173	18	74471817	74471817	C	T	intergenic	LOC284276,LOC100131655	dist=200033;dist=34871	NA	NA	ncRNA_exonic	ENSG00000265626	NA	NA	NA	Score=640;Name=lod=532	NA	18q23	NA	NA	NA	NA	rs17651075	0.18	0.18	0.155	0.173522	0.2087	0.1438	0.1729	0.1589	0.1881	0.2	0.15	0.18	0.18	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.803243	NA	NA	NA	NA	NA	0.123	NA	4.7913
1173	3	46944274	46944274	T	C	exonic	PTH1R	NA	synonymous SNV	PTH1R:NM_001184744:exon14:c.T1389C:p.N463N,PTH1R:NM_000316:exon15:c.T1389C:p.N463N	exonic	ENSG00000160801	NA	synonymous SNV	ENSG00000160801:ENST00000422115:exon2:c.T105C:p.N35N,ENSG00000160801:ENST00000313049:exon13:c.T1389C:p.N463N,ENSG00000160801:ENST00000427125:exon14:c.T1389C:p.N463N,ENSG00000160801:ENST00000430002:exon14:c.T1389C:p.N463N,ENSG00000160801:ENST00000418619:exon15:c.T1389C:p.N463N,ENSG00000160801:ENST00000449590:exon15:c.T1389C:p.N463N	NA	NA	3p21.31	Score=899;Name=V$CEBPA_01	NA	NA	NA	rs1138518	0.64	0.64	0.643	0.643371	0.6431	0.4425	0.6513	0.8215	0.6043	0.64	0.47	0.65	0.83	0.6141	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.021368	NA	NA	0.618605	0.798911	ID=COSM149372;OCCURENCE=1(stomach)	0.768	NA	4.7908616
1173	1	8859491	8859491	G	C	intronic	RERE	NA	NA	NA	ncRNA_exonic	ENSG00000226545	NA	NA	NA	Score=609;Name=lod=397	NA	1p36.23	NA	NA	NA	NA	rs6690928	0.58	0.58	0.571	0.528754	0.5427	0.8234	0.5764	0.3464	0.4233	0.56	0.83	0.52	0.37	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.109823	NA	NA	NA	NA	NA	0.558	NA	4.7906333
1173	7	87151090	87151090	T	C	intronic	ABCB1	NA	NA	NA	ncRNA_exonic	ENSG00000231956	NA	NA	NA	Score=711;Name=lod=1030	NA	7q21.12	NA	NA	NA	NA	rs4148743	0.46	0.46	0.449	0.452276	0.5427	0.2222	0.4928	0.6309	0.3262	0.54	0.19	0.49	0.62	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.754997	NA	NA	NA	NA	NA	0.507	NA	4.7906333
1173	19	41415112	41415112	T	A	intergenic	CYP2G1P,CYP2B7P1	dist=8699;dist=15058	NA	NA	ncRNA_intronic	ENSG00000198251	NA	NA	NA	NA	NA	19q13.2	NA	Name=CTCF,Rad21,SMC3_(ab9263),CTCF_(C-20),CTCF_(SC-5916)	Name=29	NA	rs3844442	0.61	0.61	0.571	0.623802	0.6044	0.5	0.7291	0.6437	0.6697	0.61	0.51	0.71	0.64	0.605	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.276031	NA	NA	NA	NA	NA	0.565	NA	4.7906
1173	1	229623137	229623137	T	C	intronic	NUP133	NA	NA	NA	intronic	ENSG00000069248	NA	NA	NA	NA	NA	1q42.13	NA	NA	Name=3	NA	rs4925493	0.27	0.27	0.279	0.285343	0.2097	0.1607	0.3184	0.5166	0.1554	0.21	0.14	0.26	0.51	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.311102	NA	NA	NA	NA	NA	0.275	NA	4.7903
1173	3	124378412	124378412	A	G	intronic	KALRN	NA	NA	NA	intronic	ENSG00000160145	NA	NA	NA	NA	NA	3q21.2	NA	Name=EBF1_(C-8),EBF	NA	NA	rs10755078	0.16	0.16	0.137	0.142572	0.2097	0.2361	0.183	0.0106	0.1268	0.21	0.2	0.17	0.02	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.640756	NA	NA	NA	NA	NA	0.08	NA	4.7903
1173	15	80051085	80051085	C	T	intergenic	KIAA1024,MTHFS	dist=286443;dist=84804	NA	NA	ncRNA_exonic	ENSG00000259229	NA	NA	NA	Score=667;Name=lod=686	NA	15q25.1	NA	NA	NA	NA	rs282778	0.25	0.25	0.26	0.299321	0.2097	0.2857	0.2133	0.3396	0.4121	0.2	0.27	0.26	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.333746	NA	NA	NA	NA	NA	0.225	NA	4.7903
1173	18	683441	683441	G	A	intronic	ENOSF1	NA	NA	NA	intronic	ENSG00000132199	NA	NA	NA	NA	NA	18p11.32	NA	NA	Name=2	NA	rs11081266	0.29	0.29	0.316	0.30012	0.2097	0.379	0.2406	0.3283	0.316	0.2	0.4	0.21	0.37	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.541741	NA	NA	NA	NA	NA	0.312	NA	4.7903
1173	9	130213508	130213508	A	G	intronic	RPL12	NA	NA	NA	intronic	ENSG00000197958	NA	NA	NA	NA	NA	9q33.3	NA	Name=ELF1_(SC-631),p300,WHIP,TAF1,IRF4_(M-17),TAF7_(SQ-8),BCLAF1_(M33-P5B11),Pol2(phosphoS2),TCF4,NELFe,Pol2,BCL3,HEY1,NFKB,c-Myc,Pol2(b),ZNF263,Pol2-4H8,CTCF_(SC-5916)	Name=12	NA	rs2244624	0.57	0.57	0.509	0.561102	0.6332	0.4107	0.6527	0.6195	0.498	0.64	0.41	0.61	0.62	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.691024	1.691024	NA	0.577247	0.619048	NA	0.457	NA	4.789553
1173	1	201843806	201843806	C	G	intronic	IPO9	NA	NA	NA	intronic	ENSG00000198700	NA	NA	NA	NA	NA	1q32.1	Score=877;Name=V$SPZ1_01	NA	NA	NA	rs34554059	0.19	0.19	0.179	0.211462	0.2107	0.1379	0.1614	0.2443	0.2791	0.21	0.12	0.19	0.24	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.235569	NA	NA	NA	NA	NA	0.225	NA	4.7893
1173	2	169020166	169020166	G	A	intronic	STK39	NA	NA	NA	intronic	ENSG00000198648	NA	NA	NA	Score=349;Name=lod=35	NA	2q24.3	NA	NA	NA	NA	rs2292785	0.36	0.36	0.339	0.38139	0.2107	0.5804	0.3127	0.4418	0.319	0.21	0.57	0.29	0.41	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.099044	NA	NA	NA	NA	NA	0.326	NA	4.7893
1173	6	85140178	85140178	A	C	intergenic	KIAA1009,TBX18	dist=202843;dist=302038	NA	NA	ncRNA_exonic	ENSG00000226309	NA	NA	NA	Score=765;Name=lod=1708	NA	6q14.3	NA	NA	NA	NA	rs3734452	0.35	0.35	0.333	0.314896	0.2107	0.6875	0.3602	0.1868	0.1789	0.21	0.68	0.33	0.21	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.151539	NA	NA	NA	NA	NA	0.326	NA	4.7893
1173	9	92995363	92995363	T	C	intergenic	LOC286370,LOC340515	dist=191582;dist=229351	NA	NA	ncRNA_exonic	ENSG00000225072	NA	NA	NA	NA	NA	9q22.2	NA	NA	Name=13	NA	rs7861446	0.32	0.32	0.32	0.364617	0.2107	0.4474	0.2968	0.4077	0.4274	0.21	0.41	0.29	0.42	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.607727	NA	NA	NA	NA	NA	0.217	NA	4.7893
1173	19	58453342	58453342	T	C	exonic	ZNF256	NA	synonymous SNV	ZNF256:NM_005773:exon3:c.A834G:p.Q278Q	exonic	ENSG00000152454	NA	synonymous SNV	ENSG00000152454:ENST00000282308:exon3:c.A834G:p.Q278Q	NA	NA	19q13.43	NA	NA	NA	NA	rs959231	0.26	0.26	0.258	0.266773	0.3002	0.3145	0.3112	0.1596	0.2965	0.3	0.29	0.29	0.14	0.2808	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.473794	1.473794	NA	0.296395	0.174081	NA	0.29	NA	4.7892716
1173	1	153320372	153320372	T	G	exonic	PGLYRP4	NA	nonsynonymous SNV	PGLYRP4:NM_020393:exon2:c.A37C:p.I13L	exonic	ENSG00000163218	NA	nonsynonymous SNV	ENSG00000163218:ENST00000359650:exon2:c.A37C:p.I13L,ENSG00000163218:ENST00000368739:exon2:c.A37C:p.I13L	NA	NA	1q21.3	NA	NA	NA	NA	rs3006458	0.79	0.79	0.775	0.794129	0.8728	0.7411	0.8588	0.7027	0.8456	0.88	0.71	0.85	0.68	0.8239	0.88	1	T	0.0	B	0.0	B	0.012	N	1.000	P	0	N	3.93	T	-0.962	T	0.001	T	0.032	-0.119	3.418	-1.05	-0.484	0.178	2.058	-0.118794	NA	1	0.847558	0.731502	NA	0.688	NA	4.7890754
1173	3	45637439	45637439	T	C	exonic	LIMD1	NA	synonymous SNV	LIMD1:NM_014240:exon1:c.T1068C:p.G356G	exonic	ENSG00000144791	NA	synonymous SNV	ENSG00000144791:ENST00000273317:exon1:c.T1068C:p.G356G,ENSG00000144791:ENST00000440097:exon1:c.T1068C:p.G356G	NA	NA	3p21.31	NA	NA	Name=41	NA	rs267236	0.71	0.71	0.718	0.735823	0.5915	0.9345	0.6859	0.7194	0.7372	0.58	0.9	0.65	0.73	0.6653	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.814181	NA	NA	0.621047	0.72424	NA	0.616	NA	4.7888196
1173	11	3913861	3913861	T	G	intronic	STIM1	NA	NA	NA	ncRNA_exonic	ENSG00000230593	NA	NA	NA	Score=711;Name=lod=1029	NA	11p15.4	NA	NA	NA	NA	rs10458895	0.6	0.6	0.579	0.647963	0.5447	0.6865	0.5836	0.6891	0.7045	0.56	0.68	0.5	0.65	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.49221	1.49221	NA	NA	NA	NA	0.565	NA	4.7886333
1173	7	12511037	12511037	T	G	intergenic	VWDE,SCIN	dist=67185;dist=99166	NA	NA	ncRNA_exonic	ENSG00000236048	NA	NA	NA	Score=574;Name=lod=288	NA	7p21.3	NA	NA	NA	NA	rs3735182	0.3	0.3	0.267	0.32528	0.2117	0.4762	0.4654	0.1596	0.411	0.21	0.5	0.41	0.14	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.964685	NA	NA	NA	NA	NA	0.304	NA	4.7883
1173	17	44346039	44346039	A	G	intergenic	KANSL1,LRRC37A	dist=43299;dist=26458	NA	NA	ncRNA_exonic	ENSG00000261575	NA	NA	NA	Score=576;Name=lod=293	NA	17q21.31	NA	NA	NA	NA	rs2532338	NA	NA	0.083	0.0778754	0.2117	0.001	0.1455	0.0129	0.0593	NA	NA	NA	NA	NA	0.076	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.613025	NA	NA	NA	NA	NA	0.109	NA	4.7883
1173	6	160769423	160769423	G	A	UTR5	SLC22A3	NM_021977:c.-29G>A	NA	NA	UTR5	ENSG00000146477	ENST00000275300:c.-29G>A	NA	NA	NA	NA	6q25.3	NA	Name=HA-E2F1,HEY1,Pol2,TAF1	Name=55	NA	rs555754	0.44	0.44	0.41	0.430112	0.4761	0.2867	0.4467	0.5507	0.3558	0.48	0.28	0.48	0.51	0.5283	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.441386	1.441386	NA	0.541267	0.62188	NA	NA	NA	4.7876664
1173	7	142045613	142045613	G	T	intergenic	LOC730441,MTRNR2L6	dist=73545;dist=328518	NA	NA	exonic	ENSG00000211745	NA	synonymous SNV	ENSG00000211745:ENST00000390392:exon2:c.G141T:p.G47G	NA	NA	7q34	Score=774;Name=V$HEN1_01	NA	NA	NA	rs2010177	NA	NA	0.279	0.0131789	NA	0.0099	0.0058	0.0393	NA	NA	NA	NA	NA	0.3383	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.6462	NA	NA	0.374312	0.272384	NA	0.21	NA	4.787388
1173	3	11928282	11928282	G	T	intergenic	TAMM41,SYN2	dist=39930;dist=117580	NA	NA	ncRNA_exonic	ENSG00000230342	NA	NA	NA	Score=561;Name=lod=255	NA	3p25.2	NA	NA	NA	NA	rs55818640	0.29	0.29	0.266	0.309305	0.2127	0.4097	0.2565	0.3487	0.2894	0.21	0.4	0.27	0.32	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.002098	NA	NA	NA	NA	NA	0.29	NA	4.7873
1173	3	106567549	106567549	G	A	intergenic	CBLB,LOC100302640	dist=979662;dist=261088	NA	NA	ncRNA_exonic	ENSG00000239997	NA	NA	NA	Score=449;Name=lod=89	NA	3q13.12	NA	NA	NA	NA	rs16853011	0.25	0.25	0.241	0.288339	0.2127	0.381	0.1844	0.2428	0.4059	0.22	0.34	0.19	0.23	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.405363	NA	NA	NA	NA	NA	0.167	NA	4.7873
1173	7	12511312	12511312	G	A	intergenic	VWDE,SCIN	dist=67460;dist=98891	NA	NA	ncRNA_exonic	ENSG00000236048	NA	NA	NA	Score=695;Name=lod=890	NA	7p21.3	NA	NA	NA	NA	rs11275	0.27	0.27	0.275	0.253395	0.2127	0.2163	0.17	0.4115	0.1789	0.23	0.23	0.2	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.218307	NA	NA	NA	NA	ID=COSN167975;OCCURENCE=1(large_intestine)	0.246	NA	4.7873
1173	10	108309995	108309995	G	A	intergenic	SORCS3,SORCS1	dist=1285002;dist=23426	NA	NA	ncRNA_exonic	ENSG00000215002	NA	NA	NA	Score=715;Name=lod=1078	NA	10q25.1	NA	NA	NA	NA	rs6584755	0.24	0.24	0.228	0.250599	0.2127	0.3313	0.1614	0.1868	0.3558	0.22	0.36	0.19	0.17	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.222576	NA	NA	NA	NA	NA	0.225	NA	4.7873
1173	14	69259502	69259502	T	C	intronic	ZFP36L1	NA	NA	NA	intronic	ENSG00000185650	NA	NA	NA	NA	NA	14q24.1	NA	Name=Pol2,Pol2-4H8	NA	NA	rs11851414	0.19	0.19	0.212	0.203075	0.2127	0.0089	0.1513	0.3873	0.181	0.2	0.01	0.15	0.4	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.515536	NA	NA	NA	NA	NA	0.297	NA	4.7873
1173	1	15789861	15789861	T	C	intronic	CELA2A	NA	NA	NA	intronic	ENSG00000142615	NA	NA	NA	NA	NA	1p36.21	NA	Name=AP-2alpha	NA	NA	rs7555510	0.08	0.08	0.079	0.0942492	0.0596	0.001	0.0648	0.2421	0.047	0.06	0.0017	0.06	0.21	0.074	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.507174	NA	NA	0.079186	0.21153	NA	0.138	NA	4.787214
1173	6	26124430	26124430	C	T	UTR5	HIST1H2AC	NM_003512:c.-31C>T	NA	NA	UTR5	ENSG00000180573	ENST00000377791:c.-31C>T,ENST00000314088:c.-31C>T	NA	NA	NA	NA	6p22.2	NA	Name=BRCA1_(C-1863),Sin3Ak-20,HA-E2F1,YY1_(C-20),BCLAF1_(M33-P5B11),TAF7_(SQ-8),Pol2-4H8,c-Fos,NELFe,Pol2,SP1,NRSF,Mxi1_(bHLH),RFX5_(N-494),STAT3,YY1,Pol2(phosphoS2),Egr-1,E2F4,ZBTB33,Pol2(b),TAF1,GATA-1,ETS1,TBP,GTF2F1_(RAP-74),GATA2_(CG2-96),CEBPB,IRF1,CHD2_(N-1250),p300_(N-15),TCF12,GTF2B,c-Myc,CCNT2,FOXA1_(SC-101058),ELF1_(SC-631),IRF3,NFKB,HEY1,FOXA2_(SC-6554),BCL3	Name=148	NA	rs198819	0.39	0.39	0.396	0.390375	0.5258	0.3065	0.4265	0.2995	0.4346	0.54	0.24	0.44	0.3	0.4884	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.019708	NA	NA	0.532442	0.342488	NA	0.399	NA	4.7866914
1173	3	113569557	113569557	G	A	intronic	GRAMD1C	NA	NA	NA	ncRNA_exonic	ENSG00000240776	NA	NA	NA	Score=747;Name=lod=1446	NA	3q13.31	NA	NA	NA	NA	rs7628746	0.51	0.51	0.462	0.534944	0.5467	0.6617	0.5274	0.3729	0.6166	0.54	0.62	0.52	0.34	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.665	NA	NA	NA	NA	NA	0.449	NA	4.7866333
1173	21	45096206	45096206	G	A	exonic	RRP1B	NA	synonymous SNV	RRP1B:NM_015056:exon7:c.G603A:p.A201A	exonic	ENSG00000160208	NA	synonymous SNV	ENSG00000160208:ENST00000340648:exon7:c.G603A:p.A201A	Score=437;Name=lod=80	NA	21q22.3	NA	NA	NA	NA	rs2155722	0.65	0.65	0.629	0.646166	0.6252	0.8353	0.7291	0.4251	0.7127	0.62	0.83	0.69	0.47	0.6519	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.508404	NA	NA	0.60314	0.468679	ID=COSM149238;OCCURENCE=1(breast),1(stomach)	0.587	NA	4.7864266
1173	1	96912659	96912659	A	G	intergenic	FLJ31662,PTBP2	dist=967747;dist=274516	NA	NA	ncRNA_exonic	ENSG00000228502	NA	NA	NA	Score=869;Name=lod=4517	NA	1p21.3	NA	NA	NA	NA	rs10783045	0.2	0.2	0.162	0.176318	0.2137	0.3145	0.1527	0.1014	0.1135	0.22	0.29	0.17	0.09	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.582189	2.582189	NA	NA	NA	NA	0.116	NA	4.7863
1173	1	209781125	209781125	T	C	intronic	CAMK1G	NA	NA	NA	intronic	ENSG00000008118	NA	NA	NA	NA	NA	1q32.2	NA	Name=STAT3	NA	NA	rs760833	0.26	0.26	0.242	0.254792	0.2137	0.373	0.2176	0.3268	0.1043	0.21	0.37	0.16	0.3	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.974167	NA	NA	NA	NA	NA	0.13	NA	4.7863
1173	7	12511924	12511924	T	G	intergenic	VWDE,SCIN	dist=68072;dist=98279	NA	NA	ncRNA_exonic	ENSG00000236048	NA	NA	NA	Score=521;Name=lod=174	NA	7p21.3	NA	NA	NA	NA	rs847956	0.26	0.26	0.268	0.253594	0.2137	0.2163	0.17	0.4115	0.1789	0.22	0.22	0.19	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.09053	NA	NA	NA	NA	NA	0.246	NA	4.7863
1173	11	123880482	123880482	T	G	intergenic	OR10S1,OR10G4	dist=32084;dist=5800	NA	NA	ncRNA_exonic	ENSG00000226461	NA	NA	NA	Score=349;Name=lod=35	NA	11q24.1	NA	NA	NA	NA	rs11601573	0.21	0.21	0.218	0.205272	0.2137	0.1002	0.1513	0.3192	0.1892	0.22	0.13	0.16	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.302795	NA	0.01	NA	NA	ID=COSN164077;OCCURENCE=1(breast)	0.232	NA	4.7863
1173	5	58118851	58118851	T	G	intronic	RAB3C	NA	NA	NA	ncRNA_exonic	ENSG00000240412	NA	NA	NA	Score=763;Name=lod=1679	NA	5q11.2	NA	NA	NA	NA	rs665051	0.37	0.37	0.319	0.355431	0.5477	0.1726	0.4323	0.2216	0.4724	0.55	0.17	0.46	0.24	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.039643	NA	NA	NA	NA	NA	0.362	NA	4.7856333
1173	19	55046739	55046739	C	A	ncRNA_intronic	KIR3DX1	NA	NA	NA	intronic	ENSG00000104970	NA	NA	NA	NA	NA	19q13.42	NA	NA	Name=2	NA	rs3745870	0.53	0.53	0.482	0.4998	0.5477	0.7798	0.5576	0.2103	0.5123	0.54	0.79	0.54	0.2	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.278974	NA	NA	NA	NA	NA	0.471	NA	4.7856333
1173	7	99998607	99998607	G	A	UTR3	ZCWPW1	NM_017984:c.*30C>T,NM_001258008:c.*191C>T	NA	NA	UTR3	ENSG00000078487	ENST00000398027:c.*30C>T,ENST00000490721:c.*30C>T,ENST00000324725:c.*30C>T,ENST00000360951:c.*191C>T	NA	NA	NA	NA	7q22.1	NA	Name=CTCF	NA	NA	rs11769886	0.1	0.1	0.078	0.0870607	0.1928	0.0278	0.1052	0.025	0.1104	0.19	0.02	0.1	0.03	0.1613	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.295844	NA	NA	0.19388	0.053873	NA	0.116	NA	4.7853534
1173	3	195664645	195664645	T	C	intergenic	TNK2,SDHAP1	dist=28765;dist=22147	NA	NA	ncRNA_exonic	ENSG00000231443	NA	NA	NA	Score=731;Name=lod=1241	NA	3q29	NA	NA	NA	NA	rs4927703	0.3	0.3	0.3	0.287141	0.2147	0.2173	0.2334	0.4924	0.1943	0.23	0.24	0.26	0.52	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.087308	NA	NA	NA	NA	NA	NA	NA	4.7853
1173	9	100326217	100326217	C	G	intronic	TMOD1	NA	NA	NA	intronic	ENSG00000136842	NA	NA	NA	NA	NA	9q22.33	NA	Name=USF1_(SC-8983)	NA	NA	rs4743109	0.19	0.19	0.172	0.226837	0.2147	0.249	0.1354	0.112	0.4366	0.22	0.22	0.13	0.15	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.074813	NA	NA	NA	NA	NA	0.13	NA	4.7853
1173	10	5690730	5690730	C	A	intronic	ASB13	NA	NA	NA	intronic	ENSG00000196372	NA	NA	NA	NA	NA	10p15.1	NA	Name=ZEB1_(SC-25388),Egr-1	NA	NA	rs34682277	0.1	0.1	0.072	0.0942492	0.2147	0.0079	0.1268	0.025	0.1299	0.21	0.0017	0.14	0.03	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.144634	NA	NA	NA	NA	NA	0.188	NA	4.7853
1173	20	47249189	47249189	T	C	intronic	PREX1	NA	NA	NA	intronic	ENSG00000124126	NA	NA	NA	NA	NA	20q13.13	NA	Name=JunD	Name=15	NA	rs4413212	0.42	0.42	0.41	0.431709	0.3996	0.3611	0.4524	0.4153	0.545	0.39	0.39	0.47	0.44	0.4152	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.598622	NA	NA	0.400116	0.410123	ID=COSN166553;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.428	NA	4.785084
1174	14	22573636	22573636	T	C	intergenic	OR4E2,DAD1	dist=439398;dist=460171	NA	NA	exonic	ENSG00000211805	NA	nonsynonymous SNV	ENSG00000211805:ENST00000390453:exon1:c.T17C:p.L6S	NA	NA	14q11.2	NA	NA	NA	NA	rs61746511	0.01	0.01	0.007	0.00539137	0.0219	NA	0.0058	NA	0.001	0.02	NA	0.01	NA	0.0104	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.160013	2.160013	0	0.016094	0.002936	NA	NA	NA	4.7849394
1174	1	27057621	27057621	A	C	intronic	ARID1A	NA	NA	NA	intronic	ENSG00000117713	NA	NA	NA	Score=259;Name=lod=15	NA	1p36.11	NA	NA	NA	NA	rs41303629	0.04	0.04	0.031	0.0371406	0.0726	0.0248	0.049	0.0053	0.0481	0.07	0.03	0.06	0.01	0.0599	0.083	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.262067	1.262067	NA	0.08314	0.018384	NA	0.029	NA	4.78436
1174	11	20595814	20595814	G	A	intergenic	PRMT3,SLC6A5	dist=64935;dist=25132	NA	NA	ncRNA_intronic	ENSG00000255291	NA	NA	NA	Score=563;Name=lod=259	NA	11p15.1	NA	NA	NA	NA	rs67612906	0.25	0.25	0.221	0.215455	0.2157	0.3284	0.2781	0.1551	0.136	0.21	0.37	0.28	0.15	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.268951	NA	NA	NA	NA	NA	0.254	NA	4.7843
1174	4	113569135	113569135	G	T	intronic	LARP7	NA	NA	NA	ncRNA_intronic	ENSG00000249532	NA	NA	NA	NA	NA	4q25	NA	Name=Egr-1,Pol2,Pol2-4H8,c-Jun,TAF7_(SQ-8),Sin3Ak-20,YY1_(C-20),JunD,TAF1	Name=12	NA	rs13136737	0.39	0.39	0.378	0.375	0.5487	0.3581	0.5331	0.0658	0.5194	0.55	0.38	0.51	0.07	0.4743	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.399998	NA	NA	0.526382	0.129145	ID=COSN167297;OCCURENCE=1(large_intestine)	0.428	NA	4.7839513
1174	17	46620402	46620402	G	A	UTR3	HOXB2	NM_002145:c.*28C>T	NA	NA	UTR3	ENSG00000173917	ENST00000330070:c.*28C>T	NA	NA	NA	NA	17q21.32	NA	NA	Name=113	NA	rs2229302	0.12	0.12	0.107	0.119209	0.1928	0.0982	0.1326	0.0703	0.1217	0.2	0.06	0.12	0.07	0.1703	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.50819	NA	NA	0.186555	0.084657	NA	0.152	NA	4.7836784
1174	11	123909073	123909073	C	G	exonic	OR10G7	NA	synonymous SNV	OR10G7:NM_001004463:exon1:c.G636C:p.L212L	exonic	ENSG00000182634	NA	synonymous SNV	ENSG00000182634:ENST00000330487:exon1:c.G636C:p.L212L	NA	NA	11q24.2	NA	NA	NA	NA	rs11219419	0.24	0.24	0.181	0.239816	0.2873	0.3363	0.3026	0.0356	0.3231	0.29	0.32	0.26	0.04	0.2873	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.962212	NA	NA	0.308444	0.086364	NA	0.275	NA	4.7836226
1174	6	112677375	112677375	C	A	intergenic	RFPL4B,MARCKS	dist=4877;dist=1501152	NA	NA	ncRNA_exonic	ENSG00000219773	NA	NA	NA	Score=799;Name=lod=2363	NA	6q21	NA	NA	NA	NA	rs11753554	0.23	0.23	0.224	0.215056	0.2167	0.1915	0.3228	0.1921	0.1922	0.21	0.22	0.29	0.23	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.146885	NA	NA	NA	NA	NA	0.232	NA	4.7833
1174	X	35971684	35971684	A	G	intronic	CXorf22	NA	NA	NA	intronic	ENSG00000165164	NA	NA	NA	Score=289;Name=lod=20	NA	Xp21.1	NA	NA	NA	NA	rs6629023	0.26	0.26	0.25119	NA	NA	NA	NA	NA	NA	0.08	0.32	0.28	0.45	0.1607	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.372405	1.372405	NA	0.056217	0.393947	NA	0.159	NA	4.783083
1174	5	79595396	79595396	T	C	ncRNA_exonic	LOC644936	NA	NA	NA	downstream	ENSG00000184188	NA	NA	NA	Score=859;Name=lod=4113	NA	5q14.1	NA	NA	NA	NA	rs4704659	NA	NA	NA	0.429912	0.3837	0.4375	0.3977	0.4939	0.4059	NA	NA	NA	NA	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.025005	NA	NA	NA	NA	NA	0.348	NA	4.7829666
1174	9	92979054	92979054	C	A	intergenic	LOC286370,LOC340515	dist=175273;dist=245660	NA	NA	ncRNA_exonic	ENSG00000185074	NA	NA	NA	Score=346;Name=lod=34	NA	9q22.2	NA	NA	NA	NA	rs10992530	0.22	0.22	0.216	0.235623	0.2177	0.1399	0.1787	0.3812	0.1963	0.22	0.12	0.18	0.36	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.689928	NA	NA	NA	NA	NA	0.152	NA	4.7823
1174	17	43197593	43197593	G	A	intronic	PLCD3	NA	NA	NA	intronic	ENSG00000161714	NA	NA	NA	NA	NA	17q21.31	NA	NA	Name=9	NA	rs2129732	0.22	0.22	0.234	0.205471	0.2177	0.0923	0.1844	0.3215	0.1677	0.22	0.1	0.23	0.34	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.877453	NA	NA	NA	NA	NA	0.232	NA	4.7823
1174	1	165533005	165533005	C	A	exonic	LRRC52	NA	synonymous SNV	LRRC52:NM_001005214:exon2:c.C886A:p.R296R	exonic	ENSG00000162763	NA	synonymous SNV	ENSG00000162763:ENST00000294818:exon2:c.C886A:p.R296R	NA	NA	1q24.1	NA	NA	NA	NA	rs453717	0.29	0.29	0.302	0.319489	0.3052	0.2282	0.2954	0.3767	0.3681	0.3	0.2	0.31	0.39	0.2933	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.092932	NA	NA	0.286047	0.342941	ID=COSM1335909;OCCURENCE=1(large_intestine)	0.268	NA	4.7821196
1174	21	33370900	33370900	T	C	exonic	HUNK	NA	synonymous SNV	HUNK:NM_014586:exon11:c.T1548C:p.S516S	exonic	ENSG00000142149	NA	synonymous SNV	ENSG00000142149:ENST00000270112:exon11:c.T1548C:p.S516S	Score=428;Name=lod=73	NA	21q22.11	NA	NA	NA	NA	rs9305483	0.62	0.62	0.605	0.634784	0.6173	0.6488	0.6383	0.5673	0.727	0.62	0.67	0.6	0.57	0.6309	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.35748	1.35748	NA	0.637326	0.580799	NA	0.63	NA	4.7811406
1174	7	47920345	47920345	G	A	exonic	PKD1L1	NA	synonymous SNV	PKD1L1:NM_138295:exon21:c.C3501T:p.Y1167Y	exonic	ENSG00000158683	NA	synonymous SNV	ENSG00000158683:ENST00000289672:exon21:c.C3501T:p.Y1167Y	NA	NA	7p12.3	NA	NA	NA	NA	rs62447081	0.31	0.31	0.325	0.340056	0.2932	0.0952	0.3429	0.59	0.3006	0.29	0.08	0.33	0.58	0.3084	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.085049	NA	NA	0.283953	0.548343	NA	0.304	NA	4.7811136
1174	20	2633404	2633404	C	G	intronic	NOP56	NA	NA	NA	intronic	ENSG00000101361	NA	NA	NA	NA	NA	20p13	NA	Name=Pol2(b),Pol2-4H8,NFKB,HEY1,c-Myc,Nrf1,TBP,TAF1,POU2F2,Pol2(phosphoS2),NRSF,Pol2,YY1_(C-20),Max,Oct-2	Name=31	NA	rs6115307	0.7	0.7	0.689	0.754393	0.6431	0.8175	0.6816	0.8147	0.774	0.64	0.77	0.68	0.73	0.5758	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0712	NA	NA	NA	NA	NA	0.174	NA	4.7811
1174	5	58118916	58118916	C	T	intronic	RAB3C	NA	NA	NA	ncRNA_exonic	ENSG00000240412	NA	NA	NA	Score=763;Name=lod=1679	NA	5q11.2	NA	NA	NA	NA	rs2675385	0.44	0.44	0.438	0.440096	0.5527	0.2242	0.4597	0.4637	0.501	0.56	0.23	0.49	0.46	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.179698	NA	NA	NA	NA	NA	0.428	NA	4.7806333
1174	16	78389473	78389473	T	C	intronic	WWOX	NA	NA	NA	ncRNA_exonic	ENSG00000260014	NA	NA	NA	Score=643;Name=lod=549	NA	16q23.1	NA	NA	NA	NA	rs7205915	0.44	0.44	0.349	0.455871	0.5527	0.0248	0.4337	0.7791	0.3793	0.56	0.02	0.46	0.73	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.051133	NA	NA	NA	NA	NA	0.268	NA	4.7806333
1174	17	78092063	78092063	G	A	exonic	GAA	NA	synonymous SNV	GAA:NM_000152:exon18:c.G2553A:p.G851G,GAA:NM_001079804:exon18:c.G2553A:p.G851G,GAA:NM_001079803:exon19:c.G2553A:p.G851G	exonic	ENSG00000171298	NA	synonymous SNV	ENSG00000171298:ENST00000302262:exon18:c.G2553A:p.G851G,ENSG00000171298:ENST00000390015:exon19:c.G2553A:p.G851G	NA	NA	17q25.3	NA	NA	NA	NA	rs1042397	0.5	0.5	0.491	0.509385	0.663	0.2887	0.4942	0.5439	0.5429	0.66	0.27	0.49	0.53	0.5805	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.643413	NA	NA	0.642674	0.530867	NA	0.58	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000078176.2;CLNDSDB=.;CLNDSDBID=.	4.7804926
1174	17	8136092	8136092	C	T	intronic	CTC1	NA	NA	NA	intronic	ENSG00000178971	NA	NA	NA	NA	Name=Telomere length	17p13.1	NA	NA	NA	NA	rs3027234	0.12	0.12	0.119	0.0974441	0.2197	0.0377	0.1225	0.0424	0.09	0.23	0.04	0.15	0.05	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.449014	NA	NA	NA	NA	NA	0.065	NA	4.7803
1174	3	49690496	49690496	C	T	exonic	BSN	NA	synonymous SNV	BSN:NM_003458:exon5:c.C3507T:p.S1169S	exonic	ENSG00000164061	NA	synonymous SNV	ENSG00000164061:ENST00000296452:exon5:c.C3507T:p.S1169S	NA	NA	3p21.31	NA	NA	NA	NA	rs11709525	0.23	0.23	0.225	0.207468	0.3241	0.0565	0.1657	0.2632	0.1973	0.32	0.06	0.22	0.3	0.2651	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.515559	NA	NA	0.297209	0.26759	ID=COSM446709;OCCURENCE=1(breast)	0.312	NA	4.7802576
1174	5	150647012	150647012	A	G	exonic	GM2A	NA	synonymous SNV	GM2A:NM_000405:exon4:c.A582G:p.X194X	exonic	ENSG00000196743	NA	synonymous SNV	ENSG00000196743:ENST00000357164:exon4:c.A582G:p.X194X	NA	NA	5q33.1	NA	NA	NA	NA	rs1048723	0.26	0.26	0.253	0.265575	0.3171	0.2698	0.4524	0.0885	0.3149	0.3	0.26	0.38	0.11	0.2913	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.404632	NA	NA	0.278488	0.132773	NA	0.254	NA	4.7797786
1174	6	36733132	36733132	G	A	exonic	CPNE5	NA	synonymous SNV	CPNE5:NM_020939:exon11:c.C759T:p.Y253Y	exonic	ENSG00000124772	NA	synonymous SNV	ENSG00000124772:ENST00000244751:exon11:c.C759T:p.Y253Y	Score=568;Name=lod=271	NA	6p21.2	NA	NA	NA	NA	rs763048	0.58	0.58	0.579	0.541933	0.6233	0.619	0.5821	0.3661	0.5879	0.63	0.65	0.62	0.39	0.6111	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.95299	NA	NA	0.652907	0.391966	NA	0.558	NA	4.7793596
1174	5	55571888	55571888	A	C	intergenic	ANKRD55,MAP3K1	dist=42702;dist=539012	NA	NA	ncRNA_exonic	ENSG00000248781	NA	NA	NA	Score=836;Name=lod=3324	NA	5q11.2	NA	NA	NA	NA	rs160076	0.16	0.16	0.12	0.135982	0.2207	0.002	0.1643	0.2247	0.047	0.21	0.01	0.19	0.23	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.45417	NA	NA	NA	NA	NA	0.094	NA	4.7793
1174	9	5418334	5418334	T	C	intronic	PLGRKT	NA	NA	NA	intronic	ENSG00000107020	NA	NA	NA	Score=618;Name=lod=434	NA	9p24.1	NA	NA	NA	NA	rs10815214	0.33	0.33	0.349	0.353634	0.2207	0.2758	0.2795	0.5499	0.3579	0.21	0.32	0.3	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.206058	NA	NA	NA	NA	NA	0.341	NA	4.7793
1174	17	43158902	43158902	G	A	intronic	NMT1	NA	NA	NA	intronic	ENSG00000136448	NA	NA	NA	Score=243;Name=lod=13	NA	17q21.31	NA	NA	NA	NA	rs916661	0.13	0.13	0.116	0.126597	0.2207	0.0218	0.2032	0.0719	0.1575	0.22	0.02	0.18	0.09	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.542662	3.542662	NA	NA	NA	NA	0.159	NA	4.7793
1174	19	15027610	15027610	C	A	intergenic	OR7A17,OR7C2	dist=35443;dist=24691	NA	NA	ncRNA_exonic	ENSG00000198367	NA	NA	NA	Score=525;Name=lod=181	NA	19p13.12	NA	NA	NA	NA	rs55788084	0.18	0.18	0.18	0.187101	0.2207	0.0268	0.2118	0.2852	0.1677	0.22	0.02	0.21	0.26	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.140638	NA	NA	NA	NA	NA	0.246	NA	4.7793
1174	15	64263784	64263784	G	A	intronic	DAPK2	NA	NA	NA	intronic	ENSG00000035664	NA	NA	NA	NA	NA	15q22.31	NA	Name=EBF,EBF1_(C-8)	Name=14	NA	rs7180050	0.27	0.27	0.23	0.241214	0.4374	0.0109	0.415	0.18	0.2362	0.42	0.01	0.4	0.23	0.3503	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.11307	NA	NA	0.43314	0.23468	NA	0.297	NA	4.77916
1174	14	74196686	74196686	T	C	exonic	ELMSAN1	NA	synonymous SNV	ELMSAN1:NM_001043318:exon4:c.A1752G:p.A584A,ELMSAN1:NM_194278:exon4:c.A1752G:p.A584A	exonic	ENSG00000156030	NA	nonsynonymous SNV	ENSG00000156030:ENST00000451078:exon4:c.A1328G:p.Q443R	NA	NA	14q24.3	NA	NA	NA	NA	rs2075025	0.56	0.56	0.542	0.604034	0.3887	0.8323	0.4524	0.649	0.637	0.37	0.86	0.43	0.61	0.4627	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.711873	NA	0	0.369737	0.59446	NA	0.558	NA	4.778863
1174	1	115417093	115417093	A	C	intronic	SYCP1	NA	NA	NA	intronic	ENSG00000198765	NA	NA	NA	Score=284;Name=lod=19	NA	1p13.2	NA	NA	NA	NA	rs7518392	0.05	0.05	0.039	0.0495208	0.0795	0.0159	0.0749	0.0333	0.0573	0.07	0.02	0.09	0.02	0.0644	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.761211	NA	NA	0.077602	0.039924	NA	0.109	NA	4.778498
1174	1	21755345	21755345	T	C	intergenic	ECE1,NBPF3	dist=83311;dist=11238	NA	NA	ncRNA_exonic	ENSG00000187952	NA	NA	NA	Score=807;Name=lod=2532	NA	1p36.12	NA	NA	NA	NA	rs41302023	0.15	0.15	0.115	0.142173	0.2217	0.0823	0.1772	0.0681	0.1973	0.22	0.09	0.17	0.08	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.453054	NA	NA	NA	NA	NA	0.188	NA	4.7783
1174	1	146522722	146522722	T	C	intergenic	LOC728989,PRKAB2	dist=8123;dist=103963	NA	NA	ncRNA_exonic	ENSG00000225603	NA	NA	NA	Score=638;Name=lod=523	NA	1q21.1	NA	NA	NA	NA	rs671205	0.32	0.32	0.284	0.359625	0.2217	0.4425	0.4135	0.3079	0.4479	0.22	0.44	0.37	0.31	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.338781	NA	NA	NA	NA	NA	0.239	NA	4.7783
1174	1	153197885	153197885	A	G	intergenic	PRR9,LOR	dist=6092;dist=34294	NA	NA	ncRNA_exonic	ENSG00000230779	NA	NA	NA	Score=805;Name=lod=2494	NA	1q21.3	NA	NA	NA	NA	rs35358388	0.17	0.17	0.171	0.140176	0.2217	0.0883	0.1354	0.1687	0.0746	0.23	0.1	0.16	0.16	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.632061	NA	NA	NA	NA	NA	0.116	NA	4.7783
1174	1	153198193	153198193	C	T	intergenic	PRR9,LOR	dist=6400;dist=33986	NA	NA	ncRNA_exonic	ENSG00000230779	NA	NA	NA	Score=805;Name=lod=2494	NA	1q21.3	NA	NA	NA	NA	rs12136409	0.15	0.15	0.155	0.118411	0.2217	0.0883	0.1311	0.0885	0.0746	0.23	0.1	0.15	0.08	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.729038	NA	NA	NA	NA	NA	0.072	NA	4.7783
1174	7	12511173	12511173	C	T	intergenic	VWDE,SCIN	dist=67321;dist=99030	NA	NA	ncRNA_exonic	ENSG00000236048	NA	NA	NA	Score=574;Name=lod=288	NA	7p21.3	NA	NA	NA	NA	rs12699379	0.27	0.27	0.246	0.328275	0.2217	0.4752	0.4669	0.1589	0.4172	0.18	0.47	0.37	0.12	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.904381	NA	NA	NA	NA	NA	0.304	NA	4.7783
1174	1	183212548	183212548	T	G	UTR3	LAMC2	NM_005562:c.*13T>G	NA	NA	UTR3	ENSG00000058085	ENST00000264144:c.*13T>G	NA	NA	NA	NA	1q25.3	NA	NA	Name=61	NA	rs3768593	0.3	0.3	0.296	0.310903	0.1501	0.3681	0.3141	0.3744	0.3292	0.16	0.39	0.29	0.39	0.2372	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.060942	2.060942	NA	0.167907	0.350136	NA	0.225	NA	4.7781264
1174	7	12511109	12511109	G	C	intergenic	VWDE,SCIN	dist=67257;dist=99094	NA	NA	ncRNA_exonic	ENSG00000236048	NA	NA	NA	Score=574;Name=lod=288	NA	7p21.3	NA	NA	NA	NA	rs3735181	0.3	0.3	0.264	0.328474	0.2227	0.4752	0.4669	0.1589	0.4172	0.22	0.5	0.41	0.14	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.455597	NA	NA	NA	NA	NA	0.304	NA	4.7773
1174	7	148277699	148277699	G	A	intergenic	CNTNAP2,C7orf33	dist=159611;dist=9958	NA	NA	ncRNA_exonic	ENSG00000213210	NA	NA	NA	Score=692;Name=lod=868	NA	7q36.1	NA	NA	NA	NA	rs73155978	0.17	0.17	0.169	0.141973	0.2227	0.1181	0.1542	0.118	0.1074	0.2	0.13	0.17	0.15	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.872848	NA	NA	NA	NA	NA	0.275	NA	4.7773
1174	17	43197675	43197675	T	C	intronic	PLCD3	NA	NA	NA	intronic	ENSG00000161714	NA	NA	NA	NA	NA	17q21.31	NA	NA	Name=9	NA	rs7226273	0.08	0.08	0.087	0.0866613	0.0775	0.0149	0.049	0.1778	0.0736	0.07	0.01	0.06	0.19	0.0716	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.412422	NA	NA	0.073909	0.152842	NA	0.087	NA	4.776991
1174	9	14618856	14618856	C	T	UTR3	ZDHHC21	NM_178566:c.*108G>A	NA	NA	UTR3	ENSG00000175893	ENST00000380916:c.*108G>A	NA	NA	Score=850;Name=lod=3782	NA	9p22.3	NA	NA	NA	NA	rs3802482	0.58	0.58	0.556	0.602636	0.5567	0.6121	0.6556	0.5371	0.6912	0.56	0.62	0.65	0.52	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.702928	1.702928	NA	NA	NA	NA	0.688	NA	4.7766334
1174	18	24179856	24179856	G	A	intronic	KCTD1	NA	NA	NA	ncRNA_exonic	ENSG00000263846	NA	NA	NA	Score=587;Name=lod=323	NA	18q11.2	NA	NA	NA	NA	rs546234	0.5	0.5	0.481	0.51238	0.5567	0.4296	0.4611	0.5197	0.5787	0.55	0.44	0.5	0.49	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.805575	1.805575	NA	NA	NA	NA	0.478	NA	4.7766333
1174	20	62714783	62714783	C	G	exonic	C20orf201	NA	synonymous SNV	C20orf201:NM_001007125:exon2:c.G678C:p.A226A	exonic	ENSG00000171695	NA	synonymous SNV	ENSG00000171695:ENST00000308906:exon2:c.G678C:p.A226A	NA	NA	20q13.33	NA	Name=Egr-1,CTCF	NA	NA	rs6010717	0.67	0.67	0.661	0.624601	0.6531	0.7093	0.6628	0.6422	0.4571	0.65	0.69	0.68	0.66	0.6124	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.61015	NA	NA	0.624796	0.635455	ID=COSM444246;OCCURENCE=1(breast)	0.674	NA	4.7763706
1174	1	146522606	146522606	T	C	intergenic	LOC728989,PRKAB2	dist=8007;dist=104079	NA	NA	ncRNA_exonic	ENSG00000225603	NA	NA	NA	Score=638;Name=lod=523	NA	1q21.1	NA	NA	NA	NA	rs521687	0.34	0.34	0.322	0.382987	0.2237	0.4335	0.4179	0.4039	0.4417	0.22	0.44	0.37	0.39	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.80231	NA	NA	NA	NA	NA	0.239	NA	4.7763
1174	6	101337975	101337975	T	G	intergenic	ASCC3,GRIK2	dist=8751;dist=508886	NA	NA	ncRNA_exonic	ENSG00000270987	NA	NA	NA	Score=420;Name=lod=68	NA	6q16.3	NA	NA	NA	NA	rs612459	0.12	0.12	0.108	0.091853	0.2237	0.001	0.1182	0.0537	0.0828	0.22	0.0017	0.14	0.07	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.760817	2.760817	NA	NA	NA	NA	0.116	NA	4.7763
1174	6	101338159	101338159	G	A	intergenic	ASCC3,GRIK2	dist=8935;dist=508702	NA	NA	ncRNA_exonic	ENSG00000270987	NA	NA	NA	Score=340;Name=lod=32	NA	6q16.3	NA	NA	NA	NA	rs613338	0.17	0.17	0.164	0.150559	0.2237	0.001	0.1297	0.27	0.0828	0.22	0.0017	0.15	0.3	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.384818	NA	NA	NA	NA	NA	0.174	NA	4.7763
1174	9	43314207	43314207	G	A	intergenic	LOC642929,SPATA31A6	dist=168723;dist=310295	NA	NA	ncRNA_exonic	ENSG00000197805	NA	NA	NA	Score=804;Name=lod=2472	NA	9p12	NA	NA	NA	NA	rs28668662	0.19	0.19	0.184	0.19369	0.2237	0.2808	0.2349	0.0968	0.1748	0.21	0.25	0.2	0.1	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.347406	NA	NA	NA	NA	NA	0.007	NA	4.7763
1174	10	43312970	43312970	C	T	intronic	BMS1	NA	NA	NA	intronic	ENSG00000165733	NA	NA	NA	NA	NA	10q11.21	NA	Name=JunD	NA	NA	rs12245355	0.09	0.09	0.063	0.119209	0.0746	0.0258	0.1571	0.1884	0.1411	0.06	0.02	0.16	0.17	0.0938	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.000155	NA	NA	0.055867	0.138434	NA	0.007	NA	4.775733
1174	9	32488237	32488237	G	C	intronic	DDX58	NA	NA	NA	intronic	ENSG00000107201	NA	NA	NA	NA	NA	9p21.1	NA	Name=c-Jun	Name=56	NA	rs10813825	0.27	0.27	0.245	0.317891	0.4205	0.2083	0.3487	0.1936	0.4714	0.41	0.16	0.33	0.17	0.3774	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.254236	NA	NA	0.426395	0.233772	NA	0.319	NA	4.775705
1174	6	112683579	112683579	T	A	intergenic	RFPL4B,MARCKS	dist=11081;dist=1494948	NA	NA	ncRNA_exonic	ENSG00000215807	NA	NA	NA	Score=570;Name=lod=277	NA	6q21	NA	NA	NA	NA	rs12207048	0.11	0.11	0.107	0.104832	0.2247	0.0308	0.111	0.025	0.1616	0.21	0.03	0.13	0.02	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.463446	NA	NA	NA	NA	NA	0.13	NA	4.7753
1174	12	20094524	20094524	G	T	intergenic	AEBP2,LOC100506393	dist=419351;dist=73095	NA	NA	ncRNA_exonic	ENSG00000256849	NA	NA	NA	Score=736;Name=lod=1307	NA	12p12.2	NA	NA	NA	NA	rs1844950	0.33	0.33	0.297	0.309904	0.2247	0.5685	0.2968	0.2958	0.1595	0.22	0.58	0.3	0.25	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.031724	NA	NA	NA	NA	NA	0.254	NA	4.7753
1174	17	20805348	20805348	A	G	intergenic	CCDC144NL,USP22	dist=5895;dist=97558	NA	NA	ncRNA_exonic	ENSG00000265790	NA	NA	NA	Score=622;Name=lod=448	NA	17p11.2	NA	NA	NA	NA	rs57960567	0.25	0.25	0.221	0.251198	0.2247	0.3313	0.2839	0.1694	0.2832	0.23	0.33	0.27	0.18	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.210614	NA	NA	NA	NA	ID=COSN165365;OCCURENCE=1(breast)	0.203	NA	4.7753
1174	5	167943827	167943827	G	A	exonic	RARS	NA	synonymous SNV	RARS:NM_002887:exon13:c.G1497A:p.A499A	exonic	ENSG00000113643	NA	synonymous SNV	ENSG00000113643:ENST00000538719:exon12:c.G879A:p.A293A,ENSG00000113643:ENST00000231572:exon13:c.G1497A:p.A499A	NA	NA	5q34	Score=801;Name=V$OCT_C	NA	NA	NA	rs653568	0.79	0.79	0.8	0.784145	0.5895	0.9415	0.7565	0.9818	0.5746	0.58	0.95	0.75	0.98	0.6771	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.970404	NA	NA	0.624884	0.92828	NA	0.638	NA	4.7751826
1175	7	46039521	46039521	G	C	intergenic	IGFBP3,TNS3	dist=78650;dist=1275231	NA	NA	ncRNA_exonic	ENSG00000221971	NA	NA	NA	Score=581;Name=lod=305	NA	7p12.3	NA	NA	NA	NA	rs2462684	0.15	0.15	0.132	0.136981	0.2256	0.0169	0.2968	0.0983	0.1084	0.23	0.02	0.25	0.09	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.647467	NA	NA	NA	NA	NA	0.13	NA	4.7744
1175	10	54172815	54172815	C	A	intergenic	DKK1,MBL2	dist=95398;dist=352325	NA	NA	ncRNA_exonic	ENSG00000227972	NA	NA	NA	Score=675;Name=lod=741	NA	10q21.1	NA	NA	NA	NA	rs10824470	0.37	0.37	0.37	0.384185	0.2256	0.629	0.2104	0.4357	0.3487	0.21	0.66	0.23	0.4	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.395679	NA	NA	NA	NA	NA	0.319	NA	4.7744
1175	13	72487905	72487905	T	C	intergenic	DACH1,MZT1	dist=46575;dist=794590	NA	NA	ncRNA_exonic	ENSG00000232881	NA	NA	NA	Score=476;Name=lod=115	NA	13q21.33	NA	NA	NA	NA	rs2706405	0.44	0.44	0.437	0.433706	0.2256	0.7183	0.4035	0.5688	0.1933	0.22	0.71	0.33	0.55	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.053313	NA	NA	NA	NA	NA	0.391	NA	4.7744
1175	19	16192625	16192625	G	A	intronic	TPM4	NA	NA	NA	UTR5	ENSG00000167460	ENST00000592138:c.-4612G>A	NA	NA	NA	NA	19p13.12	NA	Name=Pol2-4H8	NA	NA	rs7247875	0.48	0.48	0.481	0.480032	0.3926	0.7192	0.3919	0.3971	0.498	0.39	0.73	0.41	0.4	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.889824	NA	NA	NA	NA	NA	0.486	NA	4.7740667
1175	1	19583725	19583725	T	C	intronic	MRTO4	NA	NA	NA	intronic	ENSG00000053372	NA	NA	NA	NA	NA	1p36.13	NA	NA	Name=19	NA	rs1738017	0.25	0.25	NA	0.251398	0.2266	0.1012	0.183	0.4932	0.1534	0.24	0.1	0.2	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.185992	NA	NA	NA	NA	NA	0.442	NA	4.7734
1175	2	132181483	132181483	G	T	intergenic	LOC389043,LOC401010	dist=15682;dist=18251	NA	NA	ncRNA_exonic	ENSG00000214077	NA	NA	NA	Score=774;Name=lod=1871	NA	2q21.1	NA	NA	NA	NA	rs1059524	0.38	0.38	0.341	0.375998	0.2266	0.754	0.5159	0.1687	0.3211	0.22	0.72	0.43	0.17	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.630519	NA	NA	NA	NA	NA	0.333	NA	4.7734
1175	2	132181872	132181872	C	T	intergenic	LOC389043,LOC401010	dist=16071;dist=17862	NA	NA	ncRNA_exonic	ENSG00000214077	NA	NA	NA	Score=774;Name=lod=1871	NA	2q21.1	NA	NA	NA	NA	rs3729567	0.36	0.36	0.337	0.363818	0.2266	0.754	0.5101	0.1309	0.3139	0.22	0.72	0.43	0.13	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.228381	NA	NA	NA	NA	NA	0.319	NA	4.7734
1175	15	70095755	70095755	C	T	intergenic	LOC145837,LINC00593	dist=231976;dist=31818	NA	NA	ncRNA_exonic	ENSG00000259496	NA	NA	NA	Score=578;Name=lod=298	NA	15q23	NA	NA	NA	NA	rs12439031	0.35	0.35	0.321	0.351637	0.2266	0.5962	0.4193	0.2103	0.3712	0.23	0.63	0.39	0.19	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.557446	NA	NA	NA	NA	NA	0.326	NA	4.7734
1175	3	10049287	10049287	T	C	exonic	LOC401052	NA	nonsynonymous SNV	LOC401052:NM_001008737:exon4:c.A98G:p.H33R	ncRNA_exonic	ENSG00000206567	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs2272118	0.34	0.34	0.336	0.35623	0.2087	0.1369	0.3199	0.7368	0.2454	0.21	0.19	0.34	0.74	0.2706	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.387238	NA	NA	0.247433	0.629484	ID=COSM149331;OCCURENCE=1(stomach)	0.536	NA	4.773267
1175	1	146516341	146516341	T	G	intergenic	LOC728989,PRKAB2	dist=1742;dist=110344	NA	NA	ncRNA_exonic	ENSG00000227242	NA	NA	NA	Score=515;Name=lod=165	NA	1q21.1	NA	NA	NA	NA	rs557228	0.18	0.18	0.123	0.202476	0.2276	0.0853	0.3098	0.0779	0.3896	0.25	0.09	0.31	0.08	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.55017	NA	NA	NA	NA	NA	0.123	NA	4.7724
1175	2	132182138	132182138	G	T	intergenic	LOC389043,LOC401010	dist=16337;dist=17596	NA	NA	ncRNA_exonic	ENSG00000214077	NA	NA	NA	Score=742;Name=lod=1384	NA	2q21.1	NA	NA	NA	NA	rs3730150	0.37	0.37	0.317	0.364217	0.2276	0.749	0.5101	0.1354	0.3139	0.22	0.72	0.43	0.13	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.098307	NA	NA	NA	NA	NA	0.319	NA	4.7724
1175	2	132182159	132182159	T	C	intergenic	LOC389043,LOC401010	dist=16358;dist=17575	NA	NA	ncRNA_exonic	ENSG00000214077	NA	NA	NA	Score=742;Name=lod=1384	NA	2q21.1	NA	NA	NA	NA	rs3730148	0.36	0.36	0.299	0.364617	0.2276	0.754	0.5086	0.1339	0.3139	0.22	0.72	0.42	0.13	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.470113	NA	NA	NA	NA	NA	0.319	NA	4.7724
1175	2	132182199	132182199	C	T	intergenic	LOC389043,LOC401010	dist=16398;dist=17535	NA	NA	ncRNA_exonic	ENSG00000214077	NA	NA	NA	Score=742;Name=lod=1384	NA	2q21.1	NA	NA	NA	NA	rs3730153	0.33	0.33	0.297	0.363818	0.2276	0.754	0.5101	0.1301	0.3139	0.18	0.69	0.39	0.09	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.72653	NA	NA	NA	NA	NA	0.319	NA	4.7724
1175	6	32609015	32609015	C	T	intronic	HLA-DQA1	NA	NA	NA	intronic	ENSG00000196735	NA	NA	NA	NA	NA	6p21.32	NA	Name=Pol2-4H8	NA	NA	rs9272686	0.21	0.21	0.186	0.184704	0.2276	0.1171	0.2406	0.2141	0.1309	0.21	0.15	0.27	0.21	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.070809	NA	NA	NA	NA	NA	0.087	NA	4.7724
1175	10	54171706	54171706	G	T	intergenic	DKK1,MBL2	dist=94289;dist=353434	NA	NA	ncRNA_exonic	ENSG00000227972	NA	NA	NA	Score=629;Name=lod=479	NA	10q21.1	NA	NA	NA	NA	rs7893873	0.42	0.42	0.447	0.43131	0.2276	0.6349	0.2305	0.5976	0.3487	0.21	0.66	0.25	0.58	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.035337	NA	NA	NA	NA	NA	0.362	NA	4.7724
1175	10	54172174	54172174	G	A	intergenic	DKK1,MBL2	dist=94757;dist=352966	NA	NA	ncRNA_exonic	ENSG00000227972	NA	NA	NA	NA	NA	10q21.1	NA	Name=FOXA1_(C-20)	NA	NA	rs7897513	0.4	0.4	0.417	0.411941	0.2276	0.628	0.2248	0.5325	0.3487	0.21	0.66	0.25	0.52	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.400598	NA	NA	NA	NA	NA	0.348	NA	4.7724
1175	10	91498626	91498626	T	C	intronic	KIF20B	NA	NA	NA	intronic	ENSG00000138182	NA	NA	NA	NA	NA	10q23.31	NA	NA	Name=12	NA	rs12415422	0.14	0.14	0.138	0.127796	0.2276	0.001	0.1873	0.087	0.1687	0.23	0.0017	0.2	0.1	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.555682	NA	NA	NA	NA	NA	0.181	NA	4.7724
1175	13	52034830	52034830	G	A	intergenic	INTS6,MIR4703	dist=7555;dist=91895	NA	NA	ncRNA_exonic	ENSG00000224892	NA	NA	NA	Score=821;Name=lod=2902	NA	13q14.3	NA	NA	NA	NA	rs9535674	0.22	0.22	0.205	0.254393	0.2276	0.2183	0.183	0.2436	0.3845	0.23	0.19	0.19	0.26	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.39383	NA	NA	NA	NA	NA	0.239	NA	4.7724
1175	14	24033070	24033070	C	T	intronic	AP1G2	NA	NA	NA	ncRNA_intronic	ENSG00000258727	NA	NA	NA	NA	Name=Sudden cardiac arrest	14q11.2	NA	NA	NA	NA	rs2281680	0.12	0.12	0.13	0.140176	0.1948	0.122	0.1383	0.0061	0.2853	0.18	0.13	0.15	0.01	0.176	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.815741	1.815741	NA	0.190465	0.037693	NA	0.196	NA	4.7720683
1175	5	77412068	77412068	C	T	intronic	AP3B1	NA	NA	NA	intronic	ENSG00000132842	NA	NA	NA	NA	NA	5q14.1	NA	NA	Name=6	NA	rs77009095	0.04	0.04	0.033	0.0361422	0.0924	NA	0.0418	0.0023	0.0573	0.1	NA	0.05	0.002	0.0611	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.682865	2.682865	NA	0.074651	0.013164	NA	0.029	NA	4.771849
1175	19	44832684	44832684	T	G	exonic	ZFP112	NA	synonymous SNV	ZFP112:NM_013380:exon4:c.A1626C:p.T542T,ZFP112:NM_001083335:exon5:c.A1644C:p.T548T	exonic	ENSG00000062370	NA	synonymous SNV	ENSG00000062370:ENST00000354340:exon4:c.A1626C:p.T542T,ENSG00000062370:ENST00000337401:exon5:c.A1644C:p.T548T,ENSG00000062370:ENST00000536500:exon5:c.A1695C:p.T565T	Score=483;Name=lod=122	NA	19q13.31	NA	NA	NA	NA	rs2609880	0.65	0.65	0.62	0.65655	0.6093	0.7629	0.7651	0.5446	0.6697	0.6	0.74	0.73	0.53	0.6524	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.597214	NA	NA	0.63314	0.578983	NA	0.623	NA	4.7718266
1175	10	3155620	3155620	A	G	exonic	PFKP	NA	synonymous SNV	PFKP:NM_002627:exon13:c.A1281G:p.A427A,PFKP:NM_001242339:exon15:c.A1257G:p.A419A	exonic	ENSG00000067057	NA	synonymous SNV	ENSG00000067057:ENST00000415005:exon8:c.A633G:p.A211A,ENSG00000067057:ENST00000381125:exon13:c.A1281G:p.A427A,ENSG00000067057:ENST00000381075:exon15:c.A1257G:p.A419A	NA	NA	10p15.2	NA	Name=BCL3	NA	NA	rs1052309	0.62	0.62	0.624	0.60623	0.6471	0.8363	0.5749	0.413	0.6104	0.65	0.83	0.52	0.41	0.6194	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.370295	NA	NA	0.628372	0.446437	NA	0.623	NA	4.7717946
1175	14	58097226	58097226	C	A	intronic	SLC35F4	NA	NA	NA	ncRNA_exonic	ENSG00000258856	NA	NA	NA	Score=629;Name=lod=478	NA	14q22.3	NA	NA	NA	NA	rs12883530	0.37	0.37	0.359	0.342452	0.5616	0.1131	0.5663	0.1906	0.3998	0.56	0.13	0.57	0.22	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.658961	1.658961	NA	NA	NA	NA	0.37	NA	4.7717333
1175	6	31243828	31243828	A	G	intergenic	HLA-C,HLA-B	dist=3915;dist=77821	NA	NA	ncRNA_exonic	ENSG00000214892	NA	NA	NA	Score=645;Name=lod=558	NA	6p21.33	NA	NA	NA	NA	rs4141168	0.26	0.26	0	0.251398	0.2286	0.3056	0.2205	0.2723	0.2127	0.24	0.3	0.19	0.28	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.726378	NA	NA	NA	NA	NA	NA	NA	4.7714
1175	9	138679863	138679863	A	G	intronic	KCNT1	NA	NA	NA	intronic	ENSG00000107147	NA	NA	NA	NA	NA	9q34.3	NA	NA	Name=2	NA	rs11103189	0.23	0.23	0.214	0.238219	0.2286	0.3294	0.2161	0.1551	0.2822	0.23	0.31	0.22	0.17	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.330753	NA	NA	NA	NA	NA	0.152	NA	4.7714
1175	15	66773975	66773975	G	A	intronic	MAP2K1	NA	NA	NA	intronic	ENSG00000169032	NA	NA	NA	NA	NA	15q22.31	NA	Name=CTCF	NA	NA	rs41277720	0.14	0.14	0.119	0.158546	0.2286	0.1716	0.1484	0.0166	0.272	0.22	0.11	0.2	0.01	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.154675	NA	NA	NA	NA	NA	0.203	NA	4.7714
1175	16	857697	857697	C	A	intronic	PRR25	NA	NA	NA	intronic	ENSG00000167945	NA	NA	NA	NA	NA	16p13.3	NA	Name=Sin3Ak-20,HA-E2F1,Pol2-4H8,ZBTB7A_(SC-34508),HEY1,TAF1,GABP,Pol2,Pol2(phosphoS2),E2F6,ELF1_(SC-631)	NA	NA	rs59540665	0.25	0.25	0.221	0.295327	0.2286	0.38	0.2839	0.0946	0.5562	0.22	0.38	0.29	0.09	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.387726	NA	NA	NA	NA	NA	0.304	NA	4.7714
1175	17	14851296	14851296	G	A	intergenic	HS3ST3B1,CDRT7	dist=601804;dist=82996	NA	NA	ncRNA_exonic	ENSG00000226156	NA	NA	NA	Score=723;Name=lod=1160	NA	17p12	NA	NA	NA	NA	rs11078275	0.21	0.21	0.226	0.172125	0.2286	0.252	0.085	0.1483	0.1258	0.24	0.26	0.09	0.18	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.088145	NA	NA	NA	NA	NA	0.239	NA	4.7714
1175	5	19520932	19520932	T	C	intronic	CDH18	NA	NA	NA	intronic	ENSG00000145526	NA	NA	NA	Score=439;Name=lod=81	NA	5p14.3	NA	NA	Name=2	NA	rs441865	0.36	0.36	0.341	0.369609	0.3976	0.3095	0.3386	0.3207	0.4908	0.4	0.3	0.35	0.36	0.4086	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.986087	1.986087	NA	0.422442	0.364957	NA	0.37	NA	4.771358
1175	5	86564995	86564995	T	A	intronic	RASA1	NA	NA	NA	UTR5	ENSG00000145715	ENST00000512763:c.-72T>A	NA	NA	NA	NA	5q14.3	NA	NA	Name=5	NA	rs3734000	0.36	0.36	0.34	0.369409	0.3956	0.4673	0.3703	0.2163	0.4479	0.39	0.43	0.36	0.22	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.309696	NA	NA	NA	NA	NA	0.355	NA	4.7710667
1175	1	232607050	232607050	T	A	intronic	SIPA1L2	NA	NA	NA	intronic	ENSG00000116991	NA	NA	NA	NA	NA	1q42.2	NA	Name=STAT3,c-Fos	NA	NA	rs12116796	0.22	0.22	0.194	0.239816	0.2296	0.1647	0.3919	0.1793	0.3016	0.22	0.16	0.37	0.18	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.01736	NA	NA	NA	NA	NA	0.297	NA	4.7704
1175	5	23304881	23304881	T	C	intergenic	CDH12,PRDM9	dist=451150;dist=202843	NA	NA	ncRNA_exonic	ENSG00000250332	NA	NA	NA	Score=721;Name=lod=1130	NA	5p14.2	NA	NA	NA	NA	rs16899394	0.26	0.26	0.271	0.329872	0.2296	0.2728	0.2867	0.3472	0.499	0.22	0.25	0.27	0.34	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.162997	NA	NA	NA	NA	NA	0.348	NA	4.7704
1175	9	71998391	71998391	T	G	intronic	FAM189A2	NA	NA	NA	intronic	ENSG00000135063	NA	NA	NA	NA	NA	9q21.11	NA	Name=USF1_(SC-8983)	NA	NA	rs10780333	0.25	0.25	0.262	0.296126	0.2296	0.2381	0.2147	0.3797	0.3691	0.22	0.22	0.22	0.37	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.774184	NA	NA	NA	NA	NA	0.319	NA	4.7704
1175	9	88513953	88513953	A	G	intergenic	LOC389765,NAA35	dist=56159;dist=42104	NA	NA	ncRNA_exonic	ENSG00000213711	NA	NA	NA	Score=794;Name=lod=2241	NA	9q21.33	NA	NA	NA	NA	rs640731	0.23	0.23	0.181	0.267772	0.2296	0.3532	0.3617	0.0212	0.4857	0.24	0.34	0.3	0.03	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.290195	NA	NA	NA	NA	NA	0.167	NA	4.7704
1175	10	52487706	52487706	C	T	intergenic	SGMS1,ASAH2B	dist=103969;dist=11982	NA	NA	ncRNA_exonic	ENSG00000213667	NA	NA	NA	Score=775;Name=lod=1882	NA	10q11.23	NA	NA	NA	NA	rs12253936	0.27	0.27	0.26	0.269169	0.2296	0.4157	0.1816	0.2315	0.272	0.23	0.42	0.19	0.24	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.578149	NA	NA	NA	NA	NA	0.239	NA	4.7704
1175	18	61564513	61564513	A	G	intronic	SERPINB2	NA	NA	NA	intronic	ENSG00000197632,ENSG00000242550	NA	NA	NA	NA	NA	18q21.33	NA	NA	Name=39	NA	rs2278180	0.33	0.33	0.317	0.349241	0.2296	0.499	0.3559	0.3669	0.2894	0.22	0.46	0.33	0.35	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.298635	1.298635	NA	NA	NA	NA	0.283	NA	4.7704
1175	10	21318457	21318457	C	A	intronic	NEBL	NA	NA	NA	ncRNA_exonic	ENSG00000228753	NA	NA	NA	Score=674;Name=lod=733	NA	10p12.31	NA	NA	NA	NA	rs3858203	0.62	0.62	0.577	0.621206	0.5636	0.7282	0.5764	0.5734	0.6667	0.56	0.75	0.6	0.57	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.156846	NA	NA	NA	NA	NA	0.435	NA	4.7697333
1175	17	46673723	46673723	T	G	ncRNA_UTR3	HOXB6	NA	NA	NA	ncRNA_UTR3	ENSG00000108511	NA	NA	NA	NA	NA	17q21.32	NA	Name=SUZ12	NA	NA	rs12949148	0.4	0.4	0.158	0.426917	0.5825	0.5208	0.5432	0.1127	0.5123	0.5	0.49	0.47	0.11	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.43211	1.43211	NA	0.314666	0.050228	NA	NA	NA	4.7695006
1175	10	51488784	51488784	G	A	intergenic	AGAP7,MSMB	dist=2457;dist=60769	NA	NA	intergenic	ENSG00000204169,ENSG00000228326	dist=2457;dist=43318	NA	NA	NA	NA	10q11.23	NA	Name=ZNF263,HA-E2F1,TBP,Pol2	Name=116	NA	rs2611498	NA	NA	0.571	0.588059	0.5646	0.7758	0.5533	0.4962	0.5675	NA	NA	NA	NA	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.553878	NA	NA	NA	NA	NA	0.543	NA	4.7687334
1175	10	51488788	51488788	C	T	intergenic	AGAP7,MSMB	dist=2461;dist=60765	NA	NA	intergenic	ENSG00000204169,ENSG00000228326	dist=2461;dist=43314	NA	NA	NA	NA	10q11.23	NA	Name=Pol2,ZNF263,HA-E2F1,TBP	Name=116	NA	rs2611497	NA	NA	0.574	0.588059	0.5646	0.7758	0.5533	0.4962	0.5675	NA	NA	NA	NA	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.628032	NA	NA	NA	NA	NA	0.543	NA	4.7687334
1175	14	68888534	68888534	G	A	intronic	RAD51B	NA	NA	NA	ncRNA_exonic	ENSG00000258477	NA	NA	NA	Score=499;Name=lod=142	NA	14q24.1	NA	NA	NA	NA	rs8013236	0.59	0.59	0.54	0.594649	0.5646	0.5129	0.7176	0.6051	0.6084	0.57	0.53	0.7	0.6	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.839174	1.839174	NA	NA	NA	NA	0.63	NA	4.7687333
1175	16	31580530	31580530	A	C	ncRNA_exonic	YBX3P1	NA	NA	NA	ncRNA_exonic	ENSG00000261614	NA	NA	NA	Score=527;Name=lod=184	NA	16p11.2	NA	NA	NA	NA	rs4889548	0.31	0.31	0.292	0.310903	0.4901	0.1538	0.3372	0.2451	0.3589	0.47	0.14	0.35	0.25	0.4081	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.60994	NA	NA	NA	NA	ID=COSN165182;OCCURENCE=1(NS),1(large_intestine)	0.246	NA	4.7684666
1175	17	18542107	18542107	G	A	intronic	TBC1D28	NA	NA	NA	intronic	ENSG00000189375	NA	NA	NA	Score=321;Name=lod=27	NA	17p11.2	NA	NA	NA	NA	rs80078274	0.16	0.16	0.141	0.167732	0.2316	0.1806	0.2248	0.0348	0.228	0.2	0.16	0.24	0.04	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.322956	1.322956	NA	NA	NA	ID=COSN165357;OCCURENCE=1(breast)	0.087	NA	4.7684
1175	9	136137547	136137547	C	A	exonic	ABO	NA	unknown	UNKNOWN	ncRNA_exonic	ENSG00000175164	NA	NA	NA	NA	NA	9q34.2	NA	NA	NA	NA	rs55876802	0.01	0.01	0.008	0.0107827	0.0288	NA	0.0173	0.0038	0.0082	0.03	NA	0.02	0.01	0.016	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.660102	NA	0.13	0.020584	0.00446	NA	NA	NA	4.7679493
1175	2	113875509	113875509	G	A	UTR5	IL1RN	NM_000577:c.-87G>A,NM_173843:c.-9795G>A,NM_173841:c.-87G>A	NA	NA	UTR5	ENSG00000136689	ENST00000361779:c.-9795G>A,ENST00000354115:c.-87G>A,ENST00000259206:c.-87G>A	NA	NA	NA	NA	2q13	NA	Name=Pol2,GATA-1	NA	NA	rs2234677	0.18	0.18	0.151	0.186502	0.2913	0.1091	0.3242	0.0174	0.2894	0.29	0.09	0.31	0.02	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.001612	NA	NA	0.274356	0.04841	NA	0.239	NA	4.7676774
1175	10	75671875	75671875	G	A	intronic	C10orf55,PLAU	NA	NA	NA	intronic	ENSG00000122861,ENSG00000222047	NA	NA	NA	NA	NA	10q22.2	NA	NA	Name=16	NA	rs2227581	0.03	0.03	0.028	0.0329473	0.0805	0.001	0.0389	0.003	0.0532	0.08	NA	0.05	0.002	0.0637	0.088	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.485246	1.485246	NA	0.088256	0.019519	NA	0.007	NA	4.767544
1175	11	113724943	113724943	T	C	intronic	USP28	NA	NA	NA	intronic	ENSG00000048028	NA	NA	NA	NA	NA	11q23.2	NA	NA	Name=2	NA	rs2513590	0.04	0.04	0.029	0.0379393	0.0726	0.001	0.072	0.0053	0.0603	0.08	NA	0.07	0.01	0.069	0.091	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.894958	NA	NA	0.090899	0.017719	NA	0.065	NA	4.767501
1175	6	32608953	32608953	C	T	intronic	HLA-DQA1	NA	NA	NA	intronic	ENSG00000196735	NA	NA	NA	NA	NA	6p21.32	NA	Name=Pol2-4H8	NA	NA	rs9272682	0.19	0.19	0.063	0.194289	0.2326	0.128	0.2695	0.2209	0.1339	0.2	0.14	0.24	0.19	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.504683	NA	NA	NA	NA	NA	0.007	NA	4.7674
1175	7	2691736	2691736	A	G	intronic	TTYH3	NA	NA	NA	intronic	ENSG00000136295	NA	NA	NA	NA	NA	7p22.3	NA	Name=TR4,Max,SUZ12	NA	NA	rs35868808	0.24	0.24	0.245	0.230232	0.2326	0.1766	0.1931	0.3086	0.2035	0.23	0.19	0.25	0.3	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.278475	NA	NA	NA	NA	NA	0.167	NA	4.7674
1175	9	2039983	2039983	A	C	intronic	SMARCA2	NA	NA	NA	intronic	ENSG00000080503	NA	NA	NA	NA	NA	9p24.3	NA	NA	Name=16	NA	rs10964528	0.39	0.39	0.402	0.410144	0.2326	0.5208	0.2954	0.6044	0.2975	0.23	0.46	0.31	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.651022	NA	NA	NA	NA	NA	0.435	NA	4.7674
1175	14	24219529	24219529	G	A	intergenic	DHRS2,DHRS4-AS1	dist=104681;dist=188411	NA	NA	ncRNA_exonic	ENSG00000259043	NA	NA	NA	Score=415;Name=lod=65	NA	14q11.2	NA	NA	NA	NA	rs35845573	0.12	0.12	0.109	0.0782748	0.2326	0.001	0.1686	0.0076	0.0307	0.23	NA	0.22	0.01	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.028279	NA	NA	NA	NA	NA	0.116	NA	4.7674
1175	15	40488851	40488851	G	A	exonic	BUB1B	NA	synonymous SNV	BUB1B:NM_001211:exon9:c.G1164A:p.A388A	exonic	ENSG00000156970	NA	synonymous SNV	ENSG00000156970:ENST00000287598:exon9:c.G1164A:p.A388A,ENSG00000156970:ENST00000412359:exon9:c.G1206A:p.A402A	NA	NA	15q15.1	NA	NA	NA	NA	rs1047130	0.21	0.21	0.202	0.190695	0.327	0.1627	0.3242	0.0182	0.2178	0.32	0.18	0.31	0.02	0.2668	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.764867	NA	NA	0.305814	0.071493	NA	0.312	NA	4.7670526
1175	22	37578579	37578579	C	T	exonic	C1QTNF6	NA	synonymous SNV	C1QTNF6:NM_031910:exon3:c.G486A:p.T162T,C1QTNF6:NM_182486:exon3:c.G486A:p.T162T	exonic	ENSG00000133466	NA	synonymous SNV	ENSG00000133466:ENST00000255836:exon2:c.G114A:p.T38T,ENSG00000133466:ENST00000337843:exon3:c.G486A:p.T162T,ENSG00000133466:ENST00000397110:exon3:c.G486A:p.T162T	NA	NA	22q12.3	NA	NA	NA	NA	rs229519	0.45	0.45	0.447	0.464657	0.2763	0.495	0.4769	0.6339	0.3896	0.28	0.51	0.44	0.65	0.3593	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.515646	NA	NA	0.264302	0.571947	ID=COSM149291;OCCURENCE=1(stomach),1(prostate)	0.5	NA	4.7667646
1175	1	183112041	183112041	G	C	UTR3	LAMC1	NM_002293:c.*116G>C	NA	NA	UTR3	ENSG00000135862	ENST00000258341:c.*116G>C	NA	NA	Score=577;Name=lod=295	NA	1q25.3	NA	NA	NA	NA	rs3359	0.57	0.57	0.55	0.576278	0.5666	0.622	0.6455	0.5038	0.5879	0.58	0.57	0.61	0.55	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.866393	3.866393	NA	NA	NA	NA	0.507	NA	4.7667334
1175	1	120165826	120165826	C	T	exonic	ZNF697	NA	synonymous SNV	ZNF697:NM_001080470:exon3:c.G1140A:p.P380P	exonic	ENSG00000143067	NA	synonymous SNV	ENSG00000143067:ENST00000421812:exon3:c.G1140A:p.P380P	Score=774;Name=lod=1865	NA	1p12	NA	NA	NA	NA	rs12076924	0.7	0.7	0.719	0.715855	0.5845	0.7738	0.6484	0.8434	0.6667	0.6	0.77	0.6	0.86	0.7163	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.910719	NA	NA	0.59923	0.82863	ID=COSM423603;OCCURENCE=1(breast)	0.551	NA	4.7666366
1175	1	114682632	114682632	G	T	intronic	SYT6	NA	NA	NA	intronic	ENSG00000134207	NA	NA	NA	NA	NA	1p13.2	Score=990;Name=V$MZF1_01	NA	NA	NA	rs72690087	0.07	0.07	0.064	0.0690895	0.1223	NA	0.0922	0.0658	0.0736	0.11	NA	0.1	0.06	0.1112	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.933537	2.933537	NA	NA	NA	NA	0.109	NA	4.7665
1175	1	117257351	117257351	G	T	intergenic	MIR320B1,CD2	dist=42902;dist=39735	NA	NA	ncRNA_exonic	ENSG00000231072	NA	NA	NA	Score=818;Name=lod=2810	NA	1p13.1	NA	NA	NA	NA	rs4271251	0.13	0.13	0.128	0.134385	0.2336	0.0407	0.1643	0.0764	0.1861	0.23	0.04	0.14	0.08	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.907213	NA	NA	NA	NA	NA	0.051	NA	4.7664
1175	5	126847729	126847729	T	C	intergenic	MEGF10,PRRC1	dist=50819;dist=5580	NA	NA	ncRNA_exonic	ENSG00000250859	NA	NA	NA	Score=385;Name=lod=49	NA	5q23.2	NA	NA	NA	NA	rs182844	0.45	0.45	0.42	0.485024	0.2336	0.626	0.438	0.6392	0.4233	0.24	0.62	0.41	0.63	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.084321	NA	NA	NA	NA	NA	0.507	NA	4.7664
1175	6	68643897	68643897	G	A	intergenic	NONE,BAI3	dist=NONE;dist=701735	NA	NA	ncRNA_exonic	ENSG00000270509	NA	NA	NA	Score=606;Name=lod=388	NA	6q12	NA	NA	NA	NA	rs7453254	0.21	0.21	0.221	0.264177	0.2336	0.0486	0.1686	0.388	0.4182	0.24	0.04	0.19	0.37	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.948161	NA	NA	NA	NA	NA	0.377	NA	4.7664
1175	9	119094545	119094545	A	C	intronic	PAPPA	NA	NA	NA	intronic	ENSG00000182752	NA	NA	NA	NA	NA	9q33.1	NA	Name=USF-1,USF2	NA	NA	rs731146	0.11	0.11	0.096	0.0714856	0.2336	NA	0.0836	0.028	0.0286	0.23	NA	0.1	0.03	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.450876	NA	NA	NA	NA	NA	0.13	NA	4.7664
1175	15	50710116	50710116	C	T	intergenic	MIR4712,USP8	dist=57509;dist=6463	NA	NA	ncRNA_exonic	ENSG00000259465	NA	NA	NA	Score=686;Name=lod=819	NA	15q21.2	NA	NA	NA	NA	rs17431564	0.17	0.17	0.149	0.136581	0.2336	0.1389	0.2536	0.028	0.0982	0.22	0.15	0.25	0.05	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.950574	NA	NA	NA	NA	NA	0.145	NA	4.7664
1175	17	15687239	15687239	G	T	intergenic	CDRT15P2,MEIS3P1	dist=18236;dist=2925	NA	NA	ncRNA_exonic	ENSG00000227018	NA	NA	NA	Score=304;Name=lod=23	NA	17p12	NA	NA	NA	NA	rs1971160	0.18	0.18	0.161	0.171925	0.2336	0.1905	0.1945	0.0613	0.2229	0.24	0.19	0.19	0.05	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.406003	NA	NA	NA	NA	NA	0.145	NA	4.7664
1175	18	24412227	24412227	G	T	intergenic	LOC728606,AQP4	dist=128625;dist=19781	NA	NA	ncRNA_exonic	ENSG00000266184	NA	NA	NA	Score=649;Name=lod=578	NA	18q11.2	NA	NA	NA	NA	rs16942794	0.23	0.23	0.213	0.208866	0.2336	0.4266	0.1585	0.0303	0.2362	0.23	0.43	0.19	0.03	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.266943	NA	NA	NA	NA	NA	0.123	NA	4.7664
1175	2	242066314	242066314	T	C	exonic	PASK	NA	synonymous SNV	PASK:NM_001252119:exon10:c.A2016G:p.A672A,PASK:NM_001252122:exon10:c.A1911G:p.A637A,PASK:NM_001252124:exon10:c.A2016G:p.A672A,PASK:NM_015148:exon10:c.A2016G:p.A672A,PASK:NM_001252120:exon11:c.A2016G:p.A672A	exonic	ENSG00000115687	NA	synonymous SNV	ENSG00000115687:ENST00000539818:exon7:c.A1368G:p.A456A,ENSG00000115687:ENST00000544142:exon7:c.A1458G:p.A486A,ENSG00000115687:ENST00000234040:exon10:c.A2016G:p.A672A,ENSG00000115687:ENST00000358649:exon10:c.A2016G:p.A672A,ENSG00000115687:ENST00000403638:exon10:c.A2016G:p.A672A,ENSG00000115687:ENST00000405260:exon10:c.A2016G:p.A672A	NA	NA	2q37.3	NA	NA	NA	NA	rs2240542	0.39	0.39	0.412	0.428315	0.2575	0.4077	0.415	0.6331	0.3579	0.25	0.38	0.4	0.64	0.3462	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.665564	NA	NA	0.29686	0.589197	NA	0.442	NA	4.7661066
1175	4	62598689	62598689	C	T	exonic	LPHN3	NA	synonymous SNV	LPHN3:NM_015236:exon5:c.C612T:p.H204H	exonic	ENSG00000150471	NA	synonymous SNV	ENSG00000150471:ENST00000504896:exon5:c.C612T:p.H204H,ENSG00000150471:ENST00000506700:exon5:c.C612T:p.H204H,ENSG00000150471:ENST00000508946:exon5:c.C612T:p.H204H,ENSG00000150471:ENST00000514157:exon5:c.C612T:p.H204H,ENSG00000150471:ENST00000514996:exon5:c.C612T:p.H204H,ENSG00000150471:ENST00000545650:exon5:c.C612T:p.H204H,ENSG00000150471:ENST00000506720:exon6:c.C816T:p.H272H,ENSG00000150471:ENST00000506746:exon6:c.C816T:p.H272H,ENSG00000150471:ENST00000507164:exon6:c.C816T:p.H272H,ENSG00000150471:ENST00000507625:exon6:c.C816T:p.H272H,ENSG00000150471:ENST00000508693:exon6:c.C816T:p.H272H,ENSG00000150471:ENST00000509896:exon6:c.C816T:p.H272H,ENSG00000150471:ENST00000511324:exon6:c.C816T:p.H272H,ENSG00000150471:ENST00000512091:exon7:c.C612T:p.H204H,ENSG00000150471:ENST00000514591:exon7:c.C612T:p.H204H	Score=753;Name=lod=1529	NA	4q13.1	NA	NA	NA	NA	rs10434219	0.78	0.78	0.771	0.789936	0.6153	0.9454	0.768	0.8941	0.684	0.61	0.94	0.74	0.89	0.6811	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.018849	NA	NA	0.60444	0.861551	ID=COSM1131097,COSM1131096,COSM1131098;OCCURENCE=1(prostate)	0.638	NA	4.7658266
1175	20	31609581	31609581	C	T	exonic	BPIFB2	NA	synonymous SNV	BPIFB2:NM_025227:exon15:c.C1311T:p.V437V	exonic	ENSG00000078898	NA	synonymous SNV	ENSG00000078898:ENST00000170150:exon15:c.C1311T:p.V437V	NA	NA	20q11.21	NA	NA	NA	NA	rs17124003	0.31	0.31	0.33	0.320288	0.326	0.1964	0.2118	0.4773	0.3067	0.33	0.19	0.23	0.47	0.289	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.393441	NA	NA	0.28593	0.438947	ID=COSM149161;OCCURENCE=1(stomach)	0.442	NA	4.7657366
1175	3	52568805	52568805	G	T	UTR5	NT5DC2	NM_022908:c.-136C>A	NA	NA	UTR5	ENSG00000168268	ENST00000307076:c.-136C>A,ENST00000492555:c.-136C>A	NA	NA	NA	NA	3p21.1	NA	NA	Name=77	NA	rs7639267	0.59	0.59	0.631	0.545128	0.5676	0.4504	0.6585	0.7005	0.3292	0.57	0.51	0.67	0.66	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.63783	NA	NA	NA	NA	NA	0.551	NA	4.7657334
1175	13	113563650	113563650	T	C	intergenic	ATP11A,MCF2L-AS1	dist=22168;dist=58148	NA	NA	UTR3	ENSG00000126217	ENST00000397036:c.*58T>C	NA	NA	NA	NA	13q34	NA	NA	Name=6	NA	rs12873277	0.11	0.11	0.094	0.0830671	0.0676	0.2411	0.0634	0.003	0.0583	0.07	0.25	0.09	0.0041	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.178787	NA	NA	NA	NA	NA	0.087	NA	4.7657334
1175	14	22038525	22038525	G	T	exonic	OR10G3	NA	synonymous SNV	OR10G3:NM_001005465:exon1:c.C351A:p.T117T	exonic	ENSG00000169208	NA	synonymous SNV	ENSG00000169208:ENST00000303532:exon1:c.C351A:p.T117T	NA	NA	14q11.2	NA	NA	NA	NA	rs11626693	0.33	0.33	0.338	0.363818	0.3072	0.2966	0.2277	0.5371	0.3538	0.31	0.28	0.26	0.47	0.3114	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.128254	NA	NA	0.282442	0.489787	NA	0.384	NA	4.7656246
1175	3	11926467	11926467	A	G	intergenic	TAMM41,SYN2	dist=38115;dist=119395	NA	NA	ncRNA_exonic	ENSG00000230342	NA	NA	NA	Score=498;Name=lod=141	NA	3p25.2	NA	NA	NA	NA	rs2055282	0.31	0.31	0.255	0.33746	0.2346	0.4107	0.2695	0.4085	0.32	0.23	0.4	0.28	0.37	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.129091	NA	NA	NA	NA	NA	0.297	NA	4.7654
1175	9	112296403	112296403	C	T	intergenic	PTPN3,PALM2	dist=35810;dist=106665	NA	NA	ncRNA_exonic	ENSG00000213539	NA	NA	NA	Score=780;Name=lod=1971	NA	9q31.3	NA	NA	NA	NA	rs7035358	0.15	0.15	0.125	0.130391	0.2346	0.0099	0.2291	0.093	0.1278	0.25	0.0035	0.22	0.1	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.253593	NA	NA	NA	NA	NA	0.094	NA	4.7654
1175	12	53125214	53125214	T	C	intergenic	KRT77,KRT76	dist=27967;dist=36725	NA	NA	ncRNA_exonic	ENSG00000257616	NA	NA	NA	Score=889;Name=lod=5448	NA	12q13.13	NA	NA	NA	NA	rs4761808	0.28	0.28	0.285	0.30631	0.2346	0.0347	0.3559	0.6407	0.1728	0.24	0.02	0.32	0.63	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.024508	NA	NA	NA	NA	NA	0.413	NA	4.7654
1175	14	66480197	66480197	G	A	intergenic	FUT8,LINC00238	dist=269358;dist=472912	NA	NA	ncRNA_exonic	ENSG00000224861	NA	NA	NA	Score=840;Name=lod=3458	NA	14q23.3	NA	NA	NA	NA	rs3888365	0.28	0.28	0.245	0.30012	0.2346	0.1716	0.2867	0.5431	0.181	0.24	0.13	0.27	0.53	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.799999	1.799999	NA	NA	NA	NA	0.087	NA	4.7654
1175	14	100405757	100405757	C	T	intronic	EML1	NA	NA	NA	intronic	ENSG00000066629	NA	NA	NA	NA	NA	14q32.2	NA	Name=EBF1_(C-8),EBF	NA	NA	rs2236282	0.34	0.34	0.356	0.369409	0.2346	0.3393	0.3847	0.5189	0.3262	0.23	0.35	0.35	0.48	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.08323	NA	NA	NA	NA	NA	0.377	NA	4.7654
1175	19	51261951	51261951	G	T	intergenic	CLEC11A,GPR32	dist=32970;dist=11770	NA	NA	ncRNA_exonic	ENSG00000269565	NA	NA	NA	Score=363;Name=lod=40	NA	19q13.33	NA	NA	NA	NA	rs11880363	0.31	0.31	0.309	0.353235	0.2346	0.2758	0.2176	0.5575	0.3753	0.23	0.26	0.24	0.52	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.254359	1.254359	0.02	NA	NA	NA	0.355	NA	4.7654
1175	21	43221983	43221983	C	T	intronic	PRDM15	NA	NA	NA	intronic	ENSG00000141956	NA	NA	NA	NA	NA	21q22.3	NA	NA	Name=4	NA	rs2236697	0.25	0.25	0.239	0.275559	0.2346	0.3313	0.2277	0.1793	0.4243	0.22	0.35	0.23	0.19	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.570972	NA	NA	NA	NA	NA	0.355	NA	4.7654
1176	11	9981297	9981297	C	T	intronic	SBF2	NA	NA	NA	ncRNA_exonic	ENSG00000254765	NA	NA	NA	Score=599;Name=lod=361	NA	11p15.4	NA	NA	NA	NA	rs4910085	0.5	0.5	0.487	0.483427	0.5686	0.3889	0.6455	0.3525	0.5552	0.58	0.42	0.61	0.38	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.159885	NA	NA	NA	NA	NA	0.457	NA	4.7647333
1176	21	40860510	40860510	T	C	intronic	SH3BGR	NA	NA	NA	ncRNA_exonic	ENSG00000235808	NA	NA	NA	Score=636;Name=lod=513	NA	21q22.2	NA	NA	NA	NA	rs3787927	0.57	0.57	0.574	0.585064	0.5686	0.6915	0.6311	0.4788	0.6033	0.56	0.68	0.6	0.43	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.090881	NA	NA	NA	NA	NA	0.717	NA	4.7647333
1176	21	40863714	40863714	C	T	intronic	SH3BGR	NA	NA	NA	ncRNA_exonic	ENSG00000228349	NA	NA	NA	Score=698;Name=lod=915	NA	21q22.2	NA	NA	NA	NA	rs9976202	0.57	0.57	0.568	0.582069	0.5686	0.6915	0.6311	0.4675	0.6033	0.56	0.68	0.6	0.43	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.067839	NA	NA	NA	NA	NA	0.717	NA	4.7647333
1176	3	184577917	184577917	A	G	intronic	VPS8	NA	NA	NA	intronic	ENSG00000156931	NA	NA	NA	NA	NA	3q27.2	NA	Name=c-Jun,JunD	NA	NA	rs7340698	0.35	0.35	0.324	0.349241	0.2356	0.6131	0.3314	0.1899	0.4223	0.24	0.6	0.35	0.23	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.431692	NA	NA	NA	NA	NA	0.413	NA	4.7644
1176	12	57849768	57849768	C	G	intronic	INHBE	NA	NA	NA	intronic	ENSG00000139269	NA	NA	NA	NA	NA	12q13.3	NA	Name=Pol2	NA	NA	rs507562	0.33	0.33	0.323	0.3752	0.2356	0.3313	0.2867	0.5	0.4581	0.23	0.32	0.28	0.53	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.4367	NA	NA	NA	NA	NA	0.341	NA	4.7644
1176	14	81422257	81422257	G	C	intronic	TSHR	NA	NA	NA	intronic	ENSG00000100629,ENSG00000165409	NA	NA	NA	NA	NA	14q31.1	NA	NA	Name=6	NA	rs2239610	0.22	0.22	0.207	0.195687	0.2356	0.1994	0.2939	0.0817	0.2352	0.24	0.24	0.26	0.12	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.464472	NA	NA	NA	NA	NA	0.297	NA	4.7644
1176	22	22533579	22533579	T	C	intergenic	TOP3B,VPREB1	dist=196432;dist=65621	NA	NA	upstream	ENSG00000254308	NA	NA	NA	Score=385;Name=lod=49	NA	22q11.22	NA	Name=MafK_(SC-477),MafF_(M8194),PU.1,ELF1_(SC-631),MafK_(ab50322)	NA	NA	rs5750674	0.73	0.73	0.71	0.702476	0.7356	0.7808	0.7867	0.5582	0.7229	0.74	0.79	0.75	0.62	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.747288	NA	NA	NA	NA	NA	0.703	NA	4.7644
1176	14	21993498	21993498	G	A	exonic	SALL2	NA	nonsynonymous SNV	SALL2:NM_005407:exon2:c.C364T:p.P122S	exonic	ENSG00000165821	NA	nonsynonymous SNV	ENSG00000165821:ENST00000317492:exon2:c.C364T:p.P122S,ENSG00000165821:ENST00000327430:exon2:c.C364T:p.P122S,ENSG00000165821:ENST00000450879:exon2:c.C358T:p.P120S,ENSG00000165821:ENST00000537235:exon2:c.C358T:p.P120S,ENSG00000165821:ENST00000538754:exon2:c.C358T:p.P120S,ENSG00000165821:ENST00000541965:exon2:c.C178T:p.P60S	NA	NA	14q11.2	NA	NA	NA	NA	rs1263811	0.81	0.81	0.776	0.798922	0.8579	0.8185	0.8631	0.6815	0.8313	0.87	0.8	0.86	0.69	0.8467	0.87	0.92	T	0.0	B	0.0	B	0.294	N	1.000	P	-1.67	N	3.86	T	-1.002	T	0.000	T	0.167	-2.113	0.006	0.975	0.075	0.023	8.416	-2.11311	NA	0.7	0.864535	0.706083	NA	0.696	NA	4.7641984
1176	16	2512523	2512523	G	A	exonic	C16orf59	NA	synonymous SNV	C16orf59:NM_025108:exon7:c.G858A:p.S286S	exonic	ENSG00000162062	NA	synonymous SNV	ENSG00000162062:ENST00000568753:exon4:c.G120A:p.S40S,ENSG00000162062:ENST00000483320:exon6:c.G357A:p.S119S,ENSG00000162062:ENST00000567489:exon6:c.G759A:p.S253S,ENSG00000162062:ENST00000361837:exon7:c.G858A:p.S286S,ENSG00000162062:ENST00000563531:exon7:c.G858A:p.S286S,ENSG00000162062:ENST00000569496:exon7:c.G858A:p.S286S	NA	NA	16p13.3	NA	NA	NA	NA	rs3810794	0.31	0.31	0.258	0.283147	0.3052	0.6111	0.3357	0.0182	0.2434	0.31	0.59	0.27	0.02	0.3245	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.00224	NA	NA	0.273158	0.056845	NA	0.21	NA	4.7638086
1176	17	78727734	78727734	T	C	intronic	RPTOR	NA	NA	NA	intronic	ENSG00000141564	NA	NA	NA	NA	NA	17q25.3	NA	NA	Name=6	NA	rs12944923	0.2	0.2	0.184	0.16873	0.2366	0.2341	0.1729	0.0333	0.2117	0.25	0.26	0.19	0.06	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.384597	NA	NA	NA	NA	NA	0.21	NA	4.7634
1176	17	986742	986742	A	G	intronic	ABR	NA	NA	NA	intronic	ENSG00000159842	NA	NA	NA	NA	NA	17p13.3	NA	Name=ZNF263	Name=7	NA	rs2257468	0.43	0.43	0.419	0.461462	0.4235	0.4881	0.3372	0.4327	0.6002	0.42	0.51	0.36	0.4	0.4281	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.338495	1.338495	NA	0.385233	0.410803	NA	0.304	NA	4.763167
1176	20	60971510	60971510	T	C	intronic	CABLES2	NA	NA	NA	intronic	ENSG00000149679	NA	NA	NA	NA	NA	20q13.33	NA	NA	Name=9	NA	rs61744285	0.07	0.07	0.055	0.10623	0.0815	0.0089	0.0519	0.1256	0.2444	0.09	0.01	0.05	0.13	0.0878	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.16062	2.16062	NA	0.068256	0.095778	ID=COSN145344;OCCURENCE=2(haematopoietic_and_lymphoid_tissue)	0.123	NA	4.762444
1176	3	119354550	119354550	T	C	intergenic	PLA1A,POPDC2	dist=5892;dist=6358	NA	NA	ncRNA_exonic	ENSG00000242052	NA	NA	NA	Score=760;Name=lod=1630	NA	3q13.33	NA	NA	NA	NA	rs71325389	0.21	0.21	0.163	0.183107	0.2376	0.247	0.304	0.031	0.181	0.23	0.28	0.3	0.03	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.011411	NA	NA	NA	NA	NA	0.188	NA	4.7624
1176	17	18554229	18554229	T	C	intergenic	TBC1D28,ZNF286B	dist=6489;dist=7513	NA	NA	ncRNA_exonic	ENSG00000174977	NA	NA	NA	Score=591;Name=lod=337	NA	17p11.2	NA	NA	NA	NA	rs3752015	0.45	0.45	0.425	0.503395	0.2376	0.7569	0.4654	0.4977	0.5501	0.24	0.73	0.39	0.51	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.735989	1.735989	NA	NA	NA	NA	0.464	NA	4.7624
1176	19	9301994	9301994	G	T	intergenic	OR7D2,OR7D4	dist=2501;dist=22532	NA	NA	ncRNA_exonic	ENSG00000267775	NA	NA	NA	Score=313;Name=lod=25	NA	19p13.2	NA	NA	NA	NA	rs2005850	0.19	0.19	0.182	0.191294	0.2376	0.2391	0.1484	0.0703	0.2883	0.23	0.26	0.16	0.06	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.083264	NA	NA	NA	NA	NA	0.167	NA	4.7624
1176	8	23423758	23423758	G	A	exonic	SLC25A37	NA	synonymous SNV	SLC25A37:NM_016612:exon2:c.G348A:p.P116P	exonic	ENSG00000147454	NA	synonymous SNV	ENSG00000147454:ENST00000290075:exon2:c.G348A:p.P116P,ENSG00000147454:ENST00000417331:exon2:c.G348A:p.P116P,ENSG00000147454:ENST00000519973:exon2:c.G348A:p.P116P,ENSG00000147454:ENST00000523930:exon2:c.G291A:p.P97P	NA	NA	8p21.2	Score=784;Name=V$PAX5_01	NA	NA	NA	rs10992	0.45	0.45	0.398	0.405551	0.6551	0.372	0.5317	0.1036	0.502	0.68	0.32	0.59	0.13	0.5688	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.152062	NA	NA	0.680532	0.230551	NA	0.464	NA	4.7622346
1176	6	33740382	33740382	G	A	UTR3	LEMD2	NM_181336:c.*23C>T,NM_001143944:c.*23C>T	NA	NA	UTR3	ENSG00000161904	ENST00000293760:c.*23C>T,ENST00000506578:c.*23C>T,ENST00000421671:c.*796C>T,ENST00000508327:c.*23C>T	NA	NA	NA	NA	6p21.31	NA	Name=GATA-2,ERalpha_a,c-Fos	Name=56	NA	rs2296744	0.49	0.49	0.459	0.485423	0.499	0.7847	0.4395	0.1732	0.6176	0.52	0.78	0.42	0.16	0.5356	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.224532	NA	NA	0.53686	0.232289	NA	0.522	NA	4.7618734
1176	19	52472295	52472295	A	G	exonic	ZNF350	NA	synonymous SNV	ZNF350:NM_021632:exon3:c.T105C:p.D35D	exonic	ENSG00000256683	NA	synonymous SNV	ENSG00000256683:ENST00000243644:exon3:c.T105C:p.D35D,ENSG00000256683:ENST00000593596:exon3:c.T105C:p.D35D,ENSG00000256683:ENST00000597788:exon3:c.T105C:p.D35D,ENSG00000256683:ENST00000594929:exon4:c.T105C:p.D35D	NA	NA	19q13.41	NA	NA	NA	NA	rs4986773	0.38	0.38	0.366	0.457867	0.2962	0.2966	0.3012	0.6762	0.6063	0.31	0.27	0.33	0.67	0.3438	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.275698	NA	NA	0.264884	0.624603	NA	0.428	NA	4.7617826
1176	1	164326589	164326589	T	G	intergenic	NUF2,PBX1	dist=1001036;dist=202008	NA	NA	ncRNA_exonic	ENSG00000213070	NA	NA	NA	Score=554;Name=lod=238	NA	1q23.3	NA	NA	NA	NA	rs34663453	0.16	0.16	0.133	0.157748	0.2386	0.0208	0.1354	0.1891	0.1892	0.24	0.02	0.12	0.2	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.311056	NA	NA	NA	NA	NA	0.167	NA	4.7614
1176	1	224762167	224762167	C	T	intergenic	WDR26,CNIH3	dist=140166;dist=42012	NA	NA	ncRNA_exonic	ENSG00000229991	NA	NA	NA	Score=440;Name=lod=82	NA	1q42.12	NA	NA	NA	NA	rs6426141	0.32	0.32	0.328	0.305711	0.2386	0.3869	0.245	0.3759	0.2393	0.24	0.41	0.22	0.4	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.500439	NA	NA	NA	NA	NA	0.464	NA	4.7614
1176	3	184567039	184567039	C	A	intronic	VPS8	NA	NA	NA	intronic	ENSG00000156931	NA	NA	NA	NA	NA	3q27.2	NA	Name=CEBPB	NA	NA	rs2305240	0.37	0.37	0.342	0.383187	0.2386	0.6101	0.3386	0.292	0.453	0.24	0.58	0.37	0.32	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.997388	NA	NA	NA	NA	NA	0.428	NA	4.7614
1176	2	132275396	132275396	T	C	ncRNA_exonic	LOC150776	NA	NA	NA	ncRNA_exonic	ENSG00000152117	NA	NA	NA	Score=644;Name=lod=552	NA	2q21.1	NA	NA	NA	NA	rs2277878	0.57	0.57	0.543	0.58127	0.4304	0.7599	0.6052	0.6218	0.4806	0.39	0.76	0.56	0.63	0.4755	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.070433	NA	NA	NA	NA	NA	0.5	NA	4.7607666
1176	8	134015166	134015166	T	G	intronic	TG	NA	NA	NA	ncRNA_exonic	ENSG00000240237	NA	NA	NA	Score=708;Name=lod=1006	NA	8q24.22	NA	NA	NA	NA	rs871402	0.49	0.49	0.499	0.477835	0.5726	0.1766	0.4207	0.7648	0.3436	0.56	0.17	0.48	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.005082	NA	NA	NA	NA	NA	0.551	NA	4.7607333
1176	13	20413151	20413151	C	A	intronic	ZMYM5	NA	NA	NA	intronic	ENSG00000132950	NA	NA	NA	NA	NA	13q12.11	NA	Name=GATA-1	NA	NA	rs61563111	0.09	0.09	0.088	0.0972444	0.0924	0.0813	0.0735	0.1687	0.0389	0.08	0.06	0.07	0.14	0.079	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.062523	NA	NA	0.068023	0.158254	NA	0.167	NA	4.760577
1176	19	16192898	16192898	A	G	intronic	TPM4	NA	NA	NA	intronic	ENSG00000167460	NA	NA	NA	NA	NA	19p13.12	NA	Name=FOXA1_(C-20),ERalpha_a,Pol2-4H8,FOXA2_(SC-6554),FOXA1_(SC-101058),Pol2	Name=3	NA	rs3826722	0.51	0.51	0.511	0.505192	0.3926	0.7192	0.3948	0.4924	0.4959	0.39	0.73	0.41	0.5	0.4429	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.249981	NA	NA	0.40407	0.453203	NA	0.551	NA	4.76043
1176	1	94360107	94360107	C	A	intronic	GCLM	NA	NA	NA	intronic	ENSG00000023909	NA	NA	NA	Score=259;Name=lod=15	NA	1p22.1	NA	NA	NA	NA	rs769211	0.25	0.25	0.234	0.21905	0.2396	0.1647	0.3718	0.2489	0.1053	0.23	0.19	0.35	0.28	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.218503	NA	NA	NA	NA	NA	0.116	NA	4.7604
1176	5	65867918	65867918	C	T	intergenic	SREK1,MAST4	dist=388474;dist=24258	NA	NA	ncRNA_exonic	ENSG00000234838	NA	NA	NA	Score=419;Name=lod=67	NA	5q12.3	NA	NA	NA	NA	rs11955611	0.3	0.3	0.28	0.309105	0.2396	0.3958	0.3141	0.2534	0.363	0.24	0.41	0.3	0.26	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.314206	NA	NA	NA	NA	NA	0.246	NA	4.7604
1176	15	48755168	48755168	T	C	intronic	FBN1	NA	NA	NA	intronic	ENSG00000166147	NA	NA	NA	NA	NA	15q21.1	NA	NA	Name=9	NA	rs9806595	0.34	0.34	0.347	0.337859	0.2396	0.3036	0.2536	0.5961	0.1851	0.24	0.34	0.21	0.59	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.829495	NA	NA	NA	NA	NA	0.304	NA	4.7604
1176	20	32333181	32333181	G	T	intronic	ZNF341	NA	NA	NA	intronic	ENSG00000131061	NA	NA	NA	NA	Name=Height	20q11.22	NA	NA	NA	NA	rs7274811	0.25	0.25	0.242	0.229233	0.2396	0.249	0.3213	0.1944	0.18	0.25	0.25	0.3	0.22	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.362186	NA	NA	NA	NA	NA	0.21	NA	4.7604
1176	17	78083726	78083726	A	G	intronic	GAA	NA	NA	NA	intronic	ENSG00000171298	NA	NA	NA	NA	NA	17q25.3	NA	Name=JunD	Name=9	NA	rs2278619	0.69	0.69	0.701	0.711661	0.7604	0.6488	0.5634	0.7118	0.8313	0.76	0.66	0.57	0.7	0.7312	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.341062	NA	NA	0.748605	0.694281	NA	0.717	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000078156.1;CLNDSDB=.;CLNDSDBID=.	4.759795
1176	8	48423840	48423840	G	A	intronic	KIAA0146	NA	NA	NA	ncRNA_exonic	ENSG00000253330	NA	NA	NA	NA	NA	8q11.21	NA	Name=CTCF	NA	NA	rs12544329	0.47	0.47	0.43	0.373602	0.5736	0.627	0.4885	0.0401	0.2761	0.58	0.66	0.48	0.05	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.997949	NA	NA	NA	NA	NA	0.457	NA	4.7597333
1176	2	28843871	28843871	G	C	intronic	PLB1	NA	NA	NA	intronic	ENSG00000163803	NA	NA	NA	NA	NA	2p23.2	NA	Name=BAF155	NA	NA	rs35800423	0.05	0.05	0.038	0.0307508	0.0885	NA	0.0447	0.0053	0.0276	0.09	NA	0.07	0.01	0.0609	0.091	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.171698	NA	NA	0.09093	0.017022	NA	0.007	NA	4.75967
1176	21	47545676	47545676	G	C	intronic	COL6A2	NA	NA	NA	intronic	ENSG00000142173	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs78764604	0.04	0.04	0.038	0.0249601	0.0895	NA	0.0346	0.0023	0.0082	0.08	NA	0.05	0.02	0.0604	0.091	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.505753	NA	NA	0.09057	0.017524	NA	0.007	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000079865.1;CLNDSDB=.;CLNDSDBID=.	4.75953
1176	17	16734869	16734869	A	G	ncRNA_exonic	KRT16P2	NA	NA	NA	ncRNA_exonic	ENSG00000227300	NA	NA	NA	Score=612;Name=lod=408	NA	17p11.2	NA	NA	NA	NA	rs2688009	0.93	0.93	0.94	NA	NA	NA	NA	NA	NA	0.85	1	0.91	0.98	0.9072	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.784498	NA	NA	NA	NA	NA	NA	NA	4.7594666
1176	8	72981327	72981327	A	G	exonic	TRPA1	NA	synonymous SNV	TRPA1:NM_007332:exon3:c.T375C:p.N125N	exonic	ENSG00000104321	NA	synonymous SNV	ENSG00000104321:ENST00000262209:exon3:c.T375C:p.N125N	Score=458;Name=lod=97	NA	8q13.3	NA	NA	NA	NA	rs1811457	0.8	0.8	0.775	0.806909	0.6074	0.9752	0.7608	0.8964	0.7505	0.62	0.99	0.74	0.9	0.6981	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.136783	NA	NA	0.601744	0.868134	NA	0.761	NA	4.7594226
1176	8	39114949	39114949	C	T	intronic	ADAM32	NA	NA	NA	intronic	ENSG00000197140	NA	NA	NA	NA	NA	8p11.22	NA	NA	Name=3	NA	rs73608630	0.23	0.23	0.216	0.220447	0.2406	0.2857	0.2118	0.1558	0.226	0.25	0.26	0.23	0.16	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.333519	NA	NA	NA	NA	NA	0.174	NA	4.7594
1176	11	121448183	121448183	C	G	intronic	SORL1	NA	NA	NA	intronic	ENSG00000137642	NA	NA	NA	NA	NA	11q24.1	NA	NA	Name=3	NA	rs3824966	0.32	0.32	0.26	0.340655	0.2406	0.5665	0.438	0.0802	0.4939	0.24	0.58	0.36	0.11	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.345683	NA	NA	NA	NA	NA	0.297	NA	4.7594
1176	19	45991636	45991636	G	C	intronic	RTN2	NA	NA	NA	intronic	ENSG00000125744	NA	NA	NA	Score=243;Name=lod=13	NA	19q13.32	NA	NA	NA	NA	rs1603	0.22	0.22	0.203	0.201877	0.2406	0.2808	0.2305	0.1702	0.1033	0.23	0.28	0.24	0.14	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.452253	4.452253	NA	NA	NA	NA	0.188	NA	4.7594
1176	7	5568366	5568366	A	G	intronic	ACTB	NA	NA	NA	intronic	ENSG00000075624	NA	NA	NA	NA	NA	7p22.1	NA	Name=Pol2,BCLAF1_(M33-P5B11),ETS1,ZBTB33,POU2F2,Oct-2,Pol2-4H8,Sin3Ak-20,JunD,Pol2(b),HEY1	Name=132	NA	rs852423	0.44	0.44	0.443	0.479832	0.3767	0.2798	0.4135	0.8124	0.3896	0.37	0.24	0.46	0.77	0.4408	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.737812	NA	NA	0.423819	0.727871	NA	0.457	NA	4.758681
1176	3	101318318	101318318	G	T	intergenic	PCNP,ZBTB11	dist=5037;dist=49965	NA	NA	ncRNA_exonic	ENSG00000243396	NA	NA	NA	Score=701;Name=lod=943	NA	3q12.3	NA	NA	NA	NA	rs17345786	0.24	0.24	0.227	0.233626	0.2416	0.2708	0.2507	0.2224	0.1902	0.23	0.28	0.23	0.21	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.472202	1.472202	NA	NA	NA	NA	0.188	NA	4.7584
1176	6	31248204	31248204	G	A	intergenic	HLA-C,HLA-B	dist=8291;dist=73445	NA	NA	ncRNA_exonic	ENSG00000227939	NA	NA	NA	Score=849;Name=lod=3743	NA	6p21.33	NA	NA	NA	NA	rs2524062	0.28	0.28	0.238	0.23103	0.2416	0.3552	0.2738	0.1762	0.136	0.26	0.36	0.29	0.2	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.158317	NA	NA	NA	NA	NA	0.239	NA	4.7584
1176	9	65632051	65632051	C	T	intergenic	SPATA31A5,PTGER4P2-CDK2AP2P2	dist=122441;dist=862218	NA	NA	ncRNA_exonic	ENSG00000237792	NA	NA	NA	Score=509;Name=lod=156	NA	9q12	NA	NA	NA	NA	rs12684652	0.23	0.23	0.162	0.204273	0.2416	0.3065	0.2104	0.1309	0.1554	0.22	0.36	0.19	0.12	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.798333	NA	NA	NA	NA	NA	0.014	NA	4.7584
1176	10	129207514	129207514	G	A	intronic	DOCK1	NA	NA	NA	intronic	ENSG00000150760	NA	NA	NA	NA	NA	10q26.2	NA	Name=CTCF	NA	NA	rs2296629	0.3	0.3	0.287	0.288738	0.2416	0.4454	0.3761	0.1407	0.3139	0.24	0.46	0.33	0.16	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.230485	NA	NA	NA	NA	NA	0.232	NA	4.7584
1176	19	41518773	41518773	C	T	intronic	CYP2B6	NA	NA	NA	intronic	ENSG00000197408	NA	NA	NA	NA	NA	19q13.2	NA	Name=CTCF	NA	NA	rs8192719	0.27	0.27	0.278	0.316893	0.2416	0.2163	0.3718	0.3744	0.3814	0.24	0.18	0.36	0.36	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.908416	NA	NA	NA	NA	NA	0.246	NA	4.7584
1176	21	36080398	36080398	T	C	intronic	CLIC6	NA	NA	NA	intronic	ENSG00000159212	NA	NA	NA	NA	NA	21q22.12	NA	Name=BATF,BCLAF1_(M33-P5B11),MEF2A,PU.1,SP1,PAX5-C20,PAX5-N19,NFKB,Egr-1	Name=10	NA	rs2070368	0.44	0.44	0.422	0.434704	0.4105	0.62	0.5072	0.2141	0.5153	0.41	0.63	0.49	0.24	0.4329	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.210558	NA	NA	0.398488	0.232183	NA	0.341	NA	4.758112
1176	4	2178127	2178127	T	G	intronic	POLN	NA	NA	NA	intronic	ENSG00000130997	NA	NA	NA	NA	NA	4p16.3	NA	NA	Name=3	NA	rs6599412	0.34	0.34	0.343	0.363219	0.1262	0.373	0.2565	0.7186	0.1922	0.13	0.37	0.26	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.523201	NA	NA	0.115965	0.635116	NA	0.406	NA	4.757835
1176	1	146554322	146554322	C	A	intergenic	LOC728989,PRKAB2	dist=39723;dist=72363	NA	NA	ncRNA_exonic	ENSG00000230832	NA	NA	NA	Score=632;Name=lod=493	NA	1q21.1	NA	NA	NA	NA	rs71510558	0.14	0.14	0.136	0.114018	0.2425	0.0258	0.121	0.1165	0.0644	0.25	0.02	0.15	0.11	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.276879	NA	NA	NA	NA	NA	0.159	NA	4.7575
1176	22	22584255	22584255	C	T	intergenic	TOP3B,VPREB1	dist=247108;dist=14945	NA	NA	ncRNA_exonic	ENSG00000234726	NA	NA	NA	NA	NA	22q11.22	NA	Name=PU.1	NA	NA	rs5750778	0.28	0.28	0.255	0.278554	0.2425	0.3244	0.3386	0.2436	0.273	0.25	0.32	0.33	0.25	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.277211	1.277211	NA	NA	NA	NA	0.203	NA	4.7575
1176	1	1225553	1225553	C	T	intronic	SCNN1D	NA	NA	NA	intronic	ENSG00000162572	NA	NA	NA	Score=289;Name=lod=20	NA	1p36.33	NA	NA	NA	NA	rs5026410	NA	NA	0.179	0.406949	0.2435	0.4911	0.3977	0.5439	0.3098	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.455206	NA	NA	NA	NA	NA	NA	NA	4.7565
1176	5	138148064	138148064	T	C	intronic	CTNNA1	NA	NA	NA	intronic	ENSG00000044115	NA	NA	NA	Score=259;Name=lod=15	NA	5q31.2	NA	NA	NA	NA	rs13154573	0.14	0.14	0.12	0.134585	0.2435	0.004	0.2147	0.0416	0.226	0.25	0.0017	0.22	0.05	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.527171	2.527171	NA	NA	NA	NA	0.152	NA	4.7565
1176	17	78950536	78950536	A	G	intergenic	RPTOR,CHMP6	dist=10363;dist=15105	NA	NA	ncRNA_exonic	ENSG00000240270	NA	NA	NA	Score=708;Name=lod=1006	NA	17q25.3	NA	NA	NA	NA	rs11658452	0.18	0.18	0.163	0.184105	0.2435	0.2292	0.2305	0.0325	0.2485	0.24	0.22	0.22	0.03	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.21806	NA	NA	NA	NA	NA	0.145	NA	4.7565
1176	5	78351636	78351636	A	C	exonic	DMGDH	NA	synonymous SNV	DMGDH:NM_013391:exon3:c.T372G:p.G124G	exonic	ENSG00000132837	NA	synonymous SNV	ENSG00000132837:ENST00000255189:exon3:c.T372G:p.G124G	Score=439;Name=lod=81	NA	5q14.1	NA	NA	NA	NA	rs2253262	0.65	0.65	0.642	0.650559	0.6262	0.7817	0.6455	0.5938	0.6207	0.61	0.78	0.67	0.55	0.6448	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.377737	1.377737	NA	0.6396	0.612171	NA	0.543	NA	4.7560666
1176	19	965043	965043	T	C	exonic	ARID3A	NA	synonymous SNV	ARID3A:NM_005224:exon6:c.T1161C:p.N387N	exonic	ENSG00000116017	NA	synonymous SNV	ENSG00000116017:ENST00000587532:exon4:c.T702C:p.N234N,ENSG00000116017:ENST00000263620:exon6:c.T1161C:p.N387N	Score=545;Name=lod=218	NA	19p13.3	Score=930;Name=V$NFY_Q6	NA	NA	NA	rs12608658	0.94	0.94	0.939	0.938898	0.9761	1	0.9107	0.8654	0.9571	0.98	1	0.91	0.85	0.9575	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.182953	NA	NA	0.977093	0.892192	NA	0.949	NA	4.7559736
1176	15	90334240	90334240	A	G	exonic	ANPEP	NA	synonymous SNV	ANPEP:NM_001150:exon19:c.T2613C:p.I871I	exonic	ENSG00000166825	NA	synonymous SNV	ENSG00000166825:ENST00000300060:exon19:c.T2613C:p.I871I	NA	NA	15q26.1	NA	NA	NA	NA	rs25654	0.29	0.29	0.289	0.313498	0.2952	0.2341	0.2493	0.3812	0.3681	0.29	0.25	0.25	0.35	0.2979	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.920067	NA	NA	0.317981	0.36	NA	0.42	NA	4.7555856
1176	1	179556174	179556174	T	C	intergenic	NPHS2,TDRD5	dist=11090;dist=4574	NA	NA	ncRNA_exonic	ENSG00000227141	NA	NA	NA	Score=764;Name=lod=1703	NA	1q25.2	NA	NA	NA	NA	rs12121642	0.15	0.15	0.158	0.141174	0.2445	0.1062	0.1354	0.1142	0.1115	0.24	0.08	0.17	0.09	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.300557	NA	NA	NA	NA	NA	0.138	NA	4.7555
1176	1	179556848	179556848	T	A	intergenic	NPHS2,TDRD5	dist=11764;dist=3900	NA	NA	ncRNA_exonic	ENSG00000227141	NA	NA	NA	Score=560;Name=lod=251	NA	1q25.2	NA	NA	NA	NA	rs7549026	0.15	0.15	0.147	0.141174	0.2445	0.1062	0.1354	0.1142	0.1115	0.24	0.08	0.17	0.09	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.050423	NA	NA	NA	NA	NA	0.138	NA	4.7555
1176	1	203800735	203800735	G	C	intronic	ZC3H11A	NA	NA	NA	intronic	ENSG00000058673	NA	NA	NA	NA	NA	1q32.1	Score=912;Name=V$ATF6_01	NA	NA	NA	rs2275325	0.26	0.26	0.229	0.273562	0.2445	0.3244	0.3761	0.1694	0.319	0.25	0.34	0.33	0.13	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.747398	NA	NA	NA	NA	NA	0.239	NA	4.7555
1176	19	11114206	11114206	C	T	intronic	SMARCA4	NA	NA	NA	intronic	ENSG00000127616	NA	NA	NA	NA	NA	19p13.2	Score=970;Name=V$P53_02	NA	NA	NA	rs17766161	0.19	0.19	0.186	0.185703	0.2445	0.2183	0.1571	0.0552	0.2883	0.24	0.23	0.2	0.06	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.042238	NA	NA	NA	NA	NA	0.145	NA	4.7555
1176	12	56510637	56510637	A	G	intronic	RPL41	NA	NA	NA	intronic	ENSG00000229117	NA	NA	NA	NA	NA	12q13.2	NA	Name=YY1_(C-20),IRF4_(M-17),NELFe,Pol2,TAF1,STAT1,Sin3Ak-20,Pol2-4H8,ZNF263,YY1,eGFP-JunB,Pol2(b),c-Myc,NFKB,HEY1	NA	NA	rs1689512	0.17	0.17	0.176	0.203674	0.1262	0.0536	0.1383	0.4871	0.1012	0.13	0.04	0.12	0.44	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.206629	NA	NA	0.118479	0.41763	NA	0.225	NA	4.755321
1177	21	43327856	43327856	A	G	exonic	C2CD2	NA	synonymous SNV	C2CD2:NM_199050:exon8:c.T591C:p.F197F,C2CD2:NM_015500:exon9:c.T1056C:p.F352F	exonic	ENSG00000157617	NA	synonymous SNV	ENSG00000157617:ENST00000329623:exon8:c.T591C:p.F197F,ENSG00000157617:ENST00000380486:exon9:c.T1056C:p.F352F	Score=444;Name=lod=85	NA	21q22.3	NA	NA	NA	NA	rs3746906	0.63	0.63	0.634	0.607428	0.6491	0.5923	0.5159	0.6248	0.6217	0.65	0.63	0.55	0.64	0.6182	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.189021	NA	NA	0.644535	0.614389	NA	0.529	NA	4.7548316
1177	14	107108288	107108288	G	A	intergenic	LINC00221,NONE	dist=156759;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000253936	NA	NA	NA	Score=489;Name=lod=130	NA	14q32.33	NA	NA	NA	NA	rs8008811	0.35	0.35	0.32	0.389976	0.2455	0.3403	0.3012	0.4418	0.5828	0.27	0.36	0.37	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.58528	NA	NA	NA	NA	NA	0.341	NA	4.7545
1177	18	12092170	12092170	G	A	intergenic	IMPA2,ANKRD62	dist=61285;dist=1678	NA	NA	ncRNA_exonic	ENSG00000267478	NA	NA	NA	Score=496;Name=lod=138	NA	18p11.21	NA	NA	NA	NA	rs11080540	0.4	0.4	0.386	0.400559	0.2455	0.5526	0.3718	0.4887	0.3047	0.24	0.55	0.38	0.49	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.345608	NA	NA	NA	NA	NA	0.348	NA	4.7545
1177	1	229567663	229567663	C	G	intronic	ACTA1	NA	NA	NA	intronic	ENSG00000143632	NA	NA	NA	NA	NA	1q42.13	NA	NA	NA	NA	rs6673359	0.25	0.25	0.106	0.139377	0.0099	0.003	0.1988	0.3964	0.0235	0.16	0.15	0.24	0.52	0.2027	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.679614	NA	NA	0.03314	0.352861	NA	0.065	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000079468.1;CLNDSDB=.;CLNDSDBID=.	4.75426
1177	19	1360082	1360082	G	A	intronic	MUM1	NA	NA	NA	intronic	ENSG00000160953	NA	NA	NA	NA	NA	19p13.3	NA	NA	Name=10	NA	rs8109377	0.09	0.09	0.091	0.101438	0.1223	0.0149	0.0922	0.1399	0.1237	0.13	0.02	0.08	0.09	0.1239	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.43194	NA	NA	NA	NA	NA	0.094	NA	4.7538
1177	3	142895926	142895926	G	A	intergenic	CHST2,SLC9A9	dist=53070;dist=88138	NA	NA	ncRNA_exonic	ENSG00000244171	NA	NA	NA	Score=831;Name=lod=3187	NA	3q24	NA	NA	NA	NA	rs10049327	0.2	0.2	0.2	0.18131	0.2465	0.0466	0.1599	0.3026	0.1043	0.25	0.04	0.18	0.32	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.511637	NA	NA	NA	NA	NA	0.174	NA	4.7535
1177	8	4985852	4985852	T	C	intergenic	CSMD1,LOC100287015	dist=133524;dist=1275225	NA	NA	ncRNA_exonic	ENSG00000206661	NA	NA	NA	Score=514;Name=lod=163	NA	8p23.2	NA	NA	NA	NA	rs11776268	0.21	0.21	0.218	0.222045	0.2465	0.0258	0.1888	0.4032	0.1779	0.25	0.03	0.22	0.36	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.904962	NA	NA	NA	NA	NA	0.174	NA	4.7535
1177	10	54172611	54172611	C	T	intergenic	DKK1,MBL2	dist=95194;dist=352529	NA	NA	ncRNA_exonic	ENSG00000227972	NA	NA	NA	Score=401;Name=lod=57	NA	10q21.1	NA	NA	NA	NA	rs10824469	0.52	0.52	0.519	0.579273	0.2465	0.8542	0.3559	0.7731	0.5348	0.23	0.84	0.33	0.73	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.706795	NA	NA	NA	NA	NA	0.478	NA	4.7535
1177	10	54172769	54172769	G	A	intergenic	DKK1,MBL2	dist=95352;dist=352371	NA	NA	ncRNA_exonic	ENSG00000227972	NA	NA	NA	Score=675;Name=lod=741	NA	10q21.1	NA	NA	NA	NA	rs7073271	0.52	0.52	0.492	0.579273	0.2465	0.8542	0.3559	0.7731	0.5348	0.23	0.84	0.33	0.73	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.023753	NA	NA	NA	NA	NA	0.486	NA	4.7535
1177	12	55805647	55805647	A	G	intergenic	OR6C65,OR6C76	dist=10396;dist=14391	NA	NA	ncRNA_exonic	ENSG00000179899	NA	NA	NA	Score=634;Name=lod=503	NA	12q13.2	NA	NA	NA	NA	rs12825123	0.2	0.2	0.169	0.21226	0.2465	0.1071	0.2435	0.18	0.3067	0.26	0.09	0.24	0.2	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.049904	NA	NA	NA	NA	NA	0.217	NA	4.7535
1177	14	107108599	107108599	T	C	intergenic	LINC00221,NONE	dist=157070;dist=NONE	NA	NA	ncRNA_intronic	ENSG00000253936	NA	NA	NA	NA	NA	14q32.33	NA	Name=NFKB,MEF2A	NA	NA	rs11161000	0.36	0.36	0.332	0.41873	0.2465	0.3383	0.304	0.5507	0.5818	0.26	0.35	0.32	0.55	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.376673	NA	NA	NA	NA	NA	0.406	NA	4.7535
1177	X	2632482	2632482	C	T	exonic	CD99	NA	synonymous SNV	CD99:NM_001122898:exon2:c.C87T:p.S29S,CD99:NM_001277710:exon2:c.C87T:p.S29S,CD99:NM_002414:exon2:c.C87T:p.S29S	exonic	ENSG00000002586	NA	synonymous SNV	ENSG00000002586:ENST00000381184:exon2:c.C87T:p.S29S,ENSG00000002586:ENST00000381187:exon2:c.C87T:p.S29S,ENSG00000002586:ENST00000381192:exon2:c.C87T:p.S29S,ENSG00000002586:ENST00000449611:exon2:c.C216T:p.S72S	NA	NA	Xp22.33	NA	NA	NA	NA	rs17849631	0.35	0.35	0.34499	NA	NA	NA	NA	NA	NA	0.52	0.37	0.39	0.04	0.4093	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.918235	NA	NA	0.50419	0.103041	NA	0.232	NA	4.7531766
1177	16	71319539	71319539	C	T	exonic	FTSJD1	NA	synonymous SNV	FTSJD1:NM_001099642:exon3:c.G285A:p.A95A,FTSJD1:NM_018348:exon3:c.G285A:p.A95A	exonic	ENSG00000180917	NA	synonymous SNV	ENSG00000180917:ENST00000564183:exon2:c.G285A:p.A95A,ENSG00000180917:ENST00000565850:exon2:c.G285A:p.A95A,ENSG00000180917:ENST00000567610:exon2:c.G285A:p.A95A,ENSG00000180917:ENST00000338099:exon3:c.G285A:p.A95A,ENSG00000180917:ENST00000434935:exon3:c.G285A:p.A95A,ENSG00000180917:ENST00000563876:exon3:c.G285A:p.A95A	Score=502;Name=lod=146	NA	16q22.2	NA	NA	NA	NA	rs3826247	0.51	0.51	0.494	0.462061	0.675	0.245	0.6628	0.3714	0.4468	0.7	0.27	0.65	0.4	0.5864	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.157626	NA	NA	0.652209	0.401729	NA	0.594	NA	4.7530576
1177	7	150324825	150324825	C	T	exonic	GIMAP6	NA	synonymous SNV	GIMAP6:NM_001244072:exon3:c.G1071A:p.L357L,GIMAP6:NM_024711:exon3:c.G861A:p.L287L	exonic	ENSG00000133561	NA	synonymous SNV	ENSG00000133561:ENST00000328902:exon3:c.G861A:p.L287L	NA	NA	7q36.1	NA	NA	NA	NA	rs3735084	0.3	0.3	0.302	0.284345	0.3091	0.2956	0.2507	0.2829	0.273	0.3	0.34	0.27	0.29	0.298	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.14129	NA	NA	0.306512	0.286655	ID=COSM150419;OCCURENCE=1(stomach)	0.246	NA	4.7530546
1177	17	76130947	76130947	G	T	intronic	TMC8	NA	NA	NA	intronic	ENSG00000167895	NA	NA	NA	NA	NA	17q25.3	NA	Name=ELF1_(SC-631)	NA	NA	rs62079073	0.09	0.09	0.095	0.0776757	0.0875	0.0804	0.0677	0.0953	0.0481	0.09	0.09	0.09	0.1	0.0783	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.935028	NA	NA	0.081279	0.085565	NA	0.043	NA	4.752921
1177	7	11046310	11046310	C	T	intronic	PHF14	NA	NA	NA	ncRNA_exonic	ENSG00000230370	NA	NA	NA	Score=715;Name=lod=1070	NA	7p21.3	NA	NA	NA	NA	rs220090	0.33	0.33	0.317	0.333466	0.5805	0.1478	0.3458	0.1558	0.502	0.56	0.15	0.38	0.13	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.170243	NA	NA	NA	NA	NA	0.275	NA	4.7528333
1177	20	43933163	43933163	T	C	exonic	MATN4	NA	synonymous SNV	MATN4:NM_003833:exon3:c.A348G:p.A116A,MATN4:NM_030590:exon3:c.A348G:p.A116A,MATN4:NM_030592:exon3:c.A348G:p.A116A	exonic	ENSG00000124159	NA	synonymous SNV	ENSG00000124159:ENST00000372754:exon2:c.A348G:p.A116A,ENSG00000124159:ENST00000372756:exon2:c.A348G:p.A116A,ENSG00000124159:ENST00000342716:exon3:c.A348G:p.A116A,ENSG00000124159:ENST00000353917:exon3:c.A348G:p.A116A,ENSG00000124159:ENST00000360607:exon3:c.A348G:p.A116A,ENSG00000124159:ENST00000537548:exon4:c.A348G:p.A116A	NA	NA	20q13.12	NA	NA	NA	NA	rs2233094	0.38	0.38	0.336	0.403554	0.2634	0.755	0.3444	0.2239	0.4703	0.26	0.73	0.34	0.2	0.374	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.622237	1.622237	NA	0.276573	0.224067	ID=COSM443892;OCCURENCE=1(breast)	0.275	NA	4.7526936
1177	22	27283521	27283521	T	C	intergenic	MIAT,MN1	dist=211081;dist=860744	NA	NA	upstream	ENSG00000231369	NA	NA	NA	Score=655;Name=lod=614	NA	22q12.1	NA	NA	Name=90	NA	rs1807676	0.78	0.78	0.75	0.75639	0.7475	0.8413	0.8285	0.7156	0.682	0.74	0.84	0.8	0.73	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.264532	NA	NA	NA	NA	NA	0.775	NA	4.7525
1177	16	55513623	55513623	C	T	intronic	MMP2	NA	NA	NA	intronic	ENSG00000087245	NA	NA	NA	NA	NA	16q12.2	NA	NA	Name=7	NA	rs243862	0.15	0.15	0.111	0.134185	0.2475	0.0992	0.232	0.031	0.1237	0.26	0.09	0.18	0.02	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.605173	NA	NA	NA	NA	NA	0.051	NA	4.7525
1177	17	53084790	53084790	C	T	intronic	STXBP4	NA	NA	NA	intronic	ENSG00000166263	NA	NA	NA	NA	NA	17q22	Score=838;Name=V$GR_Q6	NA	NA	NA	rs12051573	0.19	0.19	0.183	0.184505	0.2475	0.2421	0.1441	0.0454	0.2771	0.25	0.22	0.17	0.07	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.662672	NA	NA	NA	NA	NA	0.232	NA	4.7525
1177	20	54956707	54956707	A	G	intronic	AURKA	NA	NA	NA	intronic	ENSG00000087586	NA	NA	NA	NA	NA	20q13.2	NA	Name=MEF2A	NA	NA	rs6024840	0.43	0.43	0.431	0.446086	0.2475	0.6865	0.3473	0.5401	0.3456	0.23	0.65	0.32	0.56	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.337991	NA	NA	NA	NA	NA	0.384	NA	4.7525
1177	4	2698364	2698364	C	T	intronic	FAM193A	NA	NA	NA	intronic	ENSG00000125386	NA	NA	NA	NA	NA	4p16.3	NA	Name=EBF,POU2F2,SMC3_(ab9263),RFX5_(N-494),Pol2,IRF4_(M-17),Pol2-4H8,MEF2A,BCL11A,YY1_(C-20),Sin3Ak-20,BCL3,ZEB1_(SC-25388),NFKB,ELF1_(SC-631),Rad21,CTCF_(C-20),Oct-2,PAX5-C20,PAX5-N19,TCF12,EBF1_(C-8),p300,CTCF,CHD2_(N-1250)	Name=8	NA	rs3733215	0.4	0.4	0.366	0.388778	0.4026	0.4048	0.5648	0.233	0.4438	0.42	0.43	0.53	0.23	0.4376	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.021663	NA	NA	0.407558	0.276441	NA	0.428	NA	4.752242
1177	11	125831701	125831701	G	A	exonic	CDON	NA	synonymous SNV	CDON:NM_001243597:exon19:c.C3549T:p.V1183V,CDON:NM_016952:exon19:c.C3549T:p.V1183V	exonic	ENSG00000064309	NA	synonymous SNV	ENSG00000064309:ENST00000531738:exon10:c.C1680T:p.V560V,ENSG00000064309:ENST00000263577:exon19:c.C3549T:p.V1183V,ENSG00000064309:ENST00000392693:exon19:c.C3549T:p.V1183V	NA	NA	11q24.2	NA	NA	NA	NA	rs2276061	0.25	0.25	0.242	0.242212	0.3091	0.2837	0.2565	0.1014	0.3108	0.3	0.3	0.31	0.1	0.2906	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.117164	NA	NA	0.314841	0.13244	NA	0.399	NA	4.7521256
1177	8	87515888	87515888	G	T	intronic	RMDN1	NA	NA	NA	ncRNA_exonic	ENSG00000254088	NA	NA	NA	Score=501;Name=lod=145	NA	8q21.3	NA	NA	NA	NA	rs3883910	0.69	0.69	0.691	0.715455	0.5815	0.5863	0.7305	0.9584	0.6472	0.59	0.6	0.7	0.95	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.250542	NA	NA	NA	NA	NA	0.565	NA	4.7518333
1177	9	136907005	136907005	G	A	exonic	BRD3	NA	synonymous SNV	BRD3:NM_007371:exon8:c.C1284T:p.P428P	exonic	ENSG00000169925	NA	synonymous SNV	ENSG00000169925:ENST00000303407:exon8:c.C1284T:p.P428P,ENSG00000169925:ENST00000357885:exon8:c.C1284T:p.P428P,ENSG00000169925:ENST00000371834:exon8:c.C1284T:p.P428P	NA	NA	9q34.2	NA	NA	NA	NA	rs467387	0.33	0.33	0.273	0.335463	0.2903	0.6667	0.2594	0.0499	0.4806	0.31	0.65	0.25	0.07	0.3479	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.68164	NA	NA	0.276692	0.085565	NA	0.254	NA	4.7517746
1177	16	28997997	28997997	G	A	exonic	LAT	NA	synonymous SNV	LAT:NM_014387:exon6:c.G447A:p.A149A,LAT:NM_001014987:exon7:c.G360A:p.A120A,LAT:NM_001014988:exon7:c.G357A:p.A119A,LAT:NM_001014989:exon8:c.G468A:p.A156A	exonic	ENSG00000213658	NA	synonymous SNV	ENSG00000213658:ENST00000570232:exon4:c.G120A:p.A40A,ENSG00000213658:ENST00000360872:exon6:c.G447A:p.A149A,ENSG00000213658:ENST00000566177:exon6:c.G444A:p.A148A,ENSG00000213658:ENST00000354453:exon7:c.G417A:p.A139A,ENSG00000213658:ENST00000395456:exon7:c.G360A:p.A120A,ENSG00000213658:ENST00000454369:exon7:c.G357A:p.A119A,ENSG00000213658:ENST00000395461:exon8:c.G468A:p.A156A,ENSG00000213658:ENST00000564277:exon8:c.G357A:p.A119A	NA	NA	16p11.2	NA	NA	NA	NA	rs1131543	0.24	0.24	0.25	0.239217	0.3052	0.3125	0.1772	0.1142	0.3088	0.29	0.31	0.23	0.1	0.2854	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.23391	NA	NA	0.325233	0.141329	NA	0.225	NA	4.7508336
1177	11	111747297	111747297	A	G	exonic	FDXACB1	NA	synonymous SNV	FDXACB1:NM_138378:exon4:c.T600C:p.F200F	exonic	ENSG00000255561,ENSG00000258529	NA	synonymous SNV	ENSG00000255561:ENST00000528274:exon3:c.T333C:p.F111F,ENSG00000255561:ENST00000542429:exon3:c.T153C:p.F51F,ENSG00000255561:ENST00000260257:exon4:c.T600C:p.F200F,ENSG00000258529:ENST00000524880:exon4:c.T600C:p.F200F	NA	NA	11q23.1	NA	NA	NA	NA	rs7124696	0.27	0.27	0.253	0.245208	0.33	0.1944	0.3228	0.1982	0.2188	0.32	0.18	0.36	0.23	0.2769	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.029051	NA	NA	0.309251	0.216631	NA	0.326	NA	4.7505156
1177	7	24742553	24742553	G	A	intronic	DFNA5	NA	NA	NA	intronic	ENSG00000105928	NA	NA	NA	NA	NA	7p15.3	NA	NA	Name=43	NA	rs2240005	0.31	0.31	0.321	0.328674	0.2495	0.2748	0.2911	0.5219	0.2311	0.25	0.24	0.26	0.5	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.163469	NA	NA	NA	NA	NA	0.304	NA	4.7505
1177	9	676954	676954	T	C	UTR5	KANK1	NM_001256876:c.-19T>C,NM_001256877:c.-19T>C,NM_015158:c.-19T>C	NA	NA	ncRNA_UTR5	ENSG00000107104	NA	NA	NA	NA	NA	9p24.3	NA	NA	Name=26	NA	rs2296055	0.45	0.45	0.452	0.463458	0.2217	0.5923	0.3689	0.7345	0.2802	0.22	0.6	0.38	0.7	0.3088	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.322819	NA	NA	0.21907	0.637086	NA	0.391	NA	4.75043
1177	2	220437081	220437081	C	T	UTR5	INHA	NM_002191:c.-16C>T	NA	NA	UTR5	ENSG00000123999	ENST00000243786:c.-16C>T	NA	NA	NA	NA	2q35	NA	Name=Pol2	NA	NA	rs35118453	0.19	0.19	0.167	0.163538	0.1958	0.2113	0.2493	0.1188	0.0808	0.2	0.22	0.24	0.12	0.1837	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.076319	NA	NA	0.203488	0.14049	NA	0.159	NA	4.7503454
1177	2	128184770	128184770	T	C	exonic	PROC	NA	synonymous SNV	PROC:NM_000312:exon8:c.T768C:p.D256D	exonic	ENSG00000115718	NA	synonymous SNV	ENSG00000115718:ENST00000409048:exon6:c.T870C:p.D290D,ENSG00000115718:ENST00000422777:exon7:c.T768C:p.D256D,ENSG00000115718:ENST00000453608:exon7:c.T933C:p.D311D,ENSG00000115718:ENST00000234071:exon8:c.T768C:p.D256D	NA	NA	2q14.3	NA	NA	NA	NA	rs5937	0.21	0.21	0.226	0.229832	0.3052	0.001	0.2104	0.3472	0.2434	0.29	0.0017	0.23	0.31	0.2828	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.252059	NA	NA	0.328605	0.315252	NA	0.355	NA	4.7500616
1177	20	50407966	50407966	C	T	exonic	SALL4	NA	synonymous SNV	SALL4:NM_020436:exon2:c.G1056A:p.A352A	exonic	ENSG00000101115	NA	synonymous SNV	ENSG00000101115:ENST00000217086:exon2:c.G1056A:p.A352A,ENSG00000101115:ENST00000395997:exon2:c.G1056A:p.A352A	NA	NA	20q13.2	NA	NA	NA	NA	rs13038893	0.23	0.23	0.233	0.209265	0.328	0.0278	0.2046	0.3071	0.1452	0.33	0.04	0.24	0.31	0.2522	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.404764	NA	NA	0.336512	0.332728	NA	0.21	NA	4.7499546
1177	3	155893884	155893884	A	G	intronic	KCNAB1	NA	NA	NA	ncRNA_exonic	ENSG00000227709	NA	NA	NA	Score=796;Name=lod=2291	NA	3q25.31	NA	NA	NA	NA	rs7625226	0.68	0.68	0.66	0.628594	0.5835	0.9097	0.755	0.5129	0.4519	0.57	0.94	0.71	0.51	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.206423	NA	NA	NA	NA	NA	0.659	NA	4.7498333
1177	3	170671429	170671429	C	A	intergenic	EIF5A2,SLC2A2	dist=45003;dist=42708	NA	NA	ncRNA_exonic	ENSG00000240704	NA	NA	NA	Score=546;Name=lod=221	NA	3q26.2	NA	NA	NA	NA	rs7628878	0.26	0.26	0.259	0.253195	0.2505	0.25	0.2507	0.3139	0.1789	0.25	0.26	0.25	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.322669	NA	NA	NA	NA	NA	0.312	NA	4.7495
1177	20	61834695	61834695	G	A	exonic	YTHDF1	NA	synonymous SNV	YTHDF1:NM_017798:exon4:c.C597T:p.A199A	exonic	ENSG00000149658	NA	synonymous SNV	ENSG00000149658:ENST00000370333:exon2:c.C447T:p.A149A,ENSG00000149658:ENST00000370339:exon4:c.C597T:p.A199A	NA	NA	20q13.33	NA	NA	NA	NA	rs6122103	0.32	0.32	0.319	0.321086	0.3032	0.369	0.2478	0.3056	0.363	0.31	0.35	0.27	0.33	0.3073	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.165642	NA	NA	0.307209	0.324103	NA	0.312	NA	4.7489576
1177	19	1053575	1053575	T	G	intronic	ABCA7	NA	NA	NA	intronic	ENSG00000064687	NA	NA	NA	NA	NA	19p13.3	NA	Name=ZNF263	NA	NA	rs9282559	0.12	0.12	0.133	0.130391	0.0746	NA	0.0504	0.351	0.0808	0.08	NA	0.06	0.36	0.1147	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.628111	NA	NA	0.062118	0.256782	NA	0.116	NA	4.748582
1177	14	29063025	29063025	A	G	intergenic	LINC00645,FOXG1	dist=954183;dist=173253	NA	NA	ncRNA_exonic	ENSG00000257662	NA	NA	NA	Score=473;Name=lod=112	NA	14q12	NA	NA	NA	NA	rs1956377	0.33	0.33	0.348	0.345447	0.2515	0.4484	0.2882	0.4153	0.2822	0.25	0.4	0.28	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.325516	NA	NA	NA	NA	NA	0.261	NA	4.7485
1177	20	34054729	34054729	T	C	intronic	CEP250	NA	NA	NA	intronic	ENSG00000126001	NA	NA	NA	NA	NA	20q11.22	NA	Name=STAT1	NA	NA	rs2296402	0.31	0.31	0.303	0.371006	0.2515	0.2688	0.2579	0.4924	0.5153	0.24	0.25	0.29	0.48	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.486141	NA	NA	NA	NA	NA	0.297	NA	4.7485
1177	20	36793501	36793501	A	G	intronic	TGM2	NA	NA	NA	intronic	ENSG00000198959	NA	NA	NA	NA	NA	20q11.23	NA	Name=Pol2,NRSF,Ini1,AP-2alpha,AP-2gamma	Name=3	NA	rs2067027	0.44	0.44	0.428	0.413339	0.6342	0.4306	0.3746	0.1498	0.5521	0.62	0.41	0.45	0.18	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.441521	1.441521	NA	0.617536	0.187861	ID=COSN166523;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.297	NA	4.748264
1177	19	56473460	56473460	T	C	exonic	NLRP8	NA	synonymous SNV	NLRP8:NM_176811:exon4:c.T2070C:p.R690R	exonic	ENSG00000179709	NA	synonymous SNV	ENSG00000179709:ENST00000291971:exon4:c.T2070C:p.R690R,ENSG00000179709:ENST00000590542:exon4:c.T2070C:p.R690R	NA	NA	19q13.43	NA	NA	NA	NA	rs6509975	0.33	0.33	0.328	0.344249	0.2972	0.2827	0.3646	0.4092	0.3538	0.3	0.29	0.36	0.39	0.3202	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.180724	NA	NA	0.301512	0.403087	NA	0.355	NA	4.7477546
1177	15	65678141	65678141	A	T	intronic	IGDCC4	NA	NA	NA	intronic	ENSG00000103742	NA	NA	NA	NA	NA	15q22.31	NA	Name=BAF155,GTF2F1_(RAP-74),CTCF,Max,Rad21,YY1_(C-20),E2F6,Pol2,SMC3_(ab9263),GABP,Znf143_(16618-1-AP),CTCFL_(SC-98982),PAX5-C20,CTCF_(C-20),c-Myc,NFKB,Sin3Ak-20,Pol2-4H8,ZNF263,CTCF_(SC-5916)	Name=148	NA	rs7183130	0.54	0.54	0.525	0.492212	0.3936	0.6627	0.5937	0.4985	0.3374	0.42	0.68	0.56	0.55	0.4547	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.931687	NA	NA	0.404047	0.497955	NA	0.5	NA	4.747653
1177	3	193365939	193365939	T	G	intronic	OPA1	NA	NA	NA	intronic	ENSG00000198836	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs9831772	0.07	0.07	0.047	0.0808706	0.0855	0.0605	0.1484	0.0371	0.1084	0.09	0.05	0.13	0.02	0.0871	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.834431	NA	NA	0.079884	0.05109	NA	0.101	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000081754.1|RCV000127280.1;CLNDSDB=.|.;CLNDSDBID=.|.	4.747516
1177	2	120125973	120125973	G	C	intronic	DBI	NA	NA	NA	intronic	ENSG00000155368	NA	NA	NA	NA	NA	2q14.2	NA	NA	Name=2	NA	rs3091407	0.16	0.16	0.145	0.148163	0.2525	0.006	0.1556	0.1868	0.1299	0.26	0.0035	0.18	0.17	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.651527	NA	NA	NA	NA	NA	0.167	NA	4.7475
1177	12	52985166	52985166	G	A	intronic	KRT72	NA	NA	NA	intronic	ENSG00000170486	NA	NA	NA	NA	NA	12q13.13	NA	Name=c-Myc	NA	NA	rs11613547	0.18	0.18	0.137	0.150559	0.2525	0.1389	0.1556	0.1203	0.0951	0.25	0.13	0.18	0.12	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.464342	NA	NA	NA	NA	NA	0.225	NA	4.7475
1177	15	67102099	67102099	T	C	intergenic	SMAD6,SMAD3	dist=27762;dist=256096	NA	NA	ncRNA_exonic	ENSG00000270490	NA	NA	NA	Score=692;Name=lod=867	NA	15q22.31	NA	NA	NA	NA	rs6494603	0.32	0.32	0.339	0.341653	0.2525	0.1845	0.1931	0.6989	0.2178	0.26	0.18	0.21	0.67	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.597975	NA	NA	NA	NA	NA	0.391	NA	4.7475
1177	3	124909178	124909178	T	G	intronic	SLC12A8	NA	NA	NA	intronic	ENSG00000221955	NA	NA	NA	NA	NA	3q21.2	NA	NA	Name=3	NA	rs4679159	0.1	0.1	0.075	0.0974441	0.0765	0.1181	0.1297	0.1346	0.0245	0.08	0.11	0.11	0.12	0.0921	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.29038	NA	NA	0.084065	0.130446	NA	0.072	NA	4.747335
1177	12	124210782	124210782	T	C	exonic	ATP6V0A2	NA	synonymous SNV	ATP6V0A2:NM_012463:exon5:c.T471C:p.S157S	exonic	ENSG00000185344	NA	synonymous SNV	ENSG00000185344:ENST00000504192:exon2:c.T81C:p.S27S,ENSG00000185344:ENST00000330342:exon5:c.T471C:p.S157S	NA	NA	12q24.31	NA	NA	NA	NA	rs1399961	0.74	0.74	0.731	0.7498	0.6233	0.9474	0.7709	0.7027	0.7249	0.62	0.95	0.74	0.67	0.6756	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.258585	NA	NA	0.620698	0.677258	NA	0.761	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000081553.1;CLNDSDB=.;CLNDSDBID=.	4.7470686
1177	12	26732987	26732987	G	A	exonic	ITPR2	NA	synonymous SNV	ITPR2:NM_002223:exon33:c.C4482T:p.P1494P	exonic	ENSG00000123104	NA	synonymous SNV	ENSG00000123104:ENST00000381340:exon33:c.C4482T:p.P1494P	NA	NA	12p11.23	NA	NA	NA	NA	rs2230376	0.19	0.19	0.155	0.186701	0.332	0.0744	0.2248	0.0923	0.2536	0.32	0.06	0.22	0.12	0.2703	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.30909	NA	NA	0.317345	0.131361	NA	0.109	NA	4.7470216
1177	8	145139522	145139522	C	G	intronic	GPAA1	NA	NA	NA	intronic	ENSG00000197858	NA	NA	NA	NA	Name=Metabolic traits	8q24.3	NA	NA	NA	NA	rs6558295	0.11	0.11	0.121	0.11901	0.0895	0.001	0.0634	0.3253	0.0317	0.09	0.0017	0.07	0.32	0.0837	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.609724	NA	NA	0.079947	0.288537	NA	0.116	NA	4.746853
1177	6	151152257	151152257	A	G	exonic	PLEKHG1	NA	synonymous SNV	PLEKHG1:NM_001029884:exon16:c.A2010G:p.K670K	exonic	ENSG00000120278	NA	synonymous SNV	ENSG00000120278:ENST00000358517:exon15:c.A2010G:p.K670K,ENSG00000120278:ENST00000367328:exon16:c.A2010G:p.K670K	NA	NA	6q25.1	NA	NA	NA	NA	rs926624	0.3	0.3	0.273	0.269768	0.3082	0.381	0.3329	0.1195	0.274	0.31	0.41	0.34	0.11	0.3172	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.249096	NA	NA	0.294535	0.145483	ID=COSM450680;OCCURENCE=1(breast),1(large_intestine)	0.225	NA	4.7467316
1177	14	74992800	74992800	A	G	exonic	LTBP2	NA	synonymous SNV	LTBP2:NM_000428:exon14:c.T2406C:p.T802T	exonic	ENSG00000119681	NA	synonymous SNV	ENSG00000119681:ENST00000556359:exon5:c.T186C:p.T62T,ENSG00000119681:ENST00000261978:exon14:c.T2406C:p.T802T,ENSG00000119681:ENST00000553939:exon14:c.T2406C:p.T802T,ENSG00000119681:ENST00000556690:exon14:c.T2406C:p.T802T	NA	NA	14q24.3	NA	NA	NA	NA	rs699374	0.37	0.37	0.36	0.378794	0.2843	0.3294	0.4107	0.5416	0.2843	0.3	0.37	0.35	0.49	0.3545	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.564394	NA	NA	0.281279	0.494096	ID=COSM1178433;OCCURENCE=1(prostate)	0.355	NA	4.7465876
1177	5	39888776	39888776	T	G	intergenic	DAB2,PTGER4	dist=463441;dist=791256	NA	NA	ncRNA_exonic	ENSG00000248651	NA	NA	NA	Score=352;Name=lod=36	NA	5p13.1	NA	NA	NA	NA	rs10941479	0.17	0.17	0.167	0.188498	0.2535	0.1885	0.1369	0.0794	0.3057	0.24	0.18	0.14	0.08	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.296368	NA	NA	NA	NA	NA	0.138	NA	4.7465
1177	9	27204798	27204798	G	A	intronic	TEK	NA	NA	NA	intronic	ENSG00000120156	NA	NA	NA	NA	NA	9p21.2	NA	NA	Name=45	NA	rs566490	0.17	0.17	0.153	0.151358	0.2535	0.123	0.1599	0.0764	0.1708	0.25	0.12	0.2	0.09	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.799453	NA	NA	NA	NA	NA	0.181	NA	4.7465
1177	9	27204802	27204802	A	G	intronic	TEK	NA	NA	NA	intronic	ENSG00000120156	NA	NA	NA	NA	NA	9p21.2	NA	NA	Name=45	NA	rs593621	0.17	0.17	0.154	0.151158	0.2535	0.122	0.1599	0.0764	0.1708	0.25	0.12	0.2	0.09	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.59753	NA	NA	NA	NA	NA	0.181	NA	4.7465
1177	11	100537407	100537407	A	T	intergenic	CNTN5,ARHGAP42	dist=307791;dist=21000	NA	NA	ncRNA_exonic	ENSG00000255059	NA	NA	NA	Score=676;Name=lod=745	NA	11q22.1	NA	NA	NA	NA	rs2134301	0.29	0.29	0.267	0.297125	0.2535	0.4623	0.3415	0.0363	0.4928	0.26	0.48	0.33	0.08	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.300115	NA	NA	NA	NA	NA	0.362	NA	4.7465
1177	15	48805637	48805637	G	A	intronic	FBN1	NA	NA	NA	intronic	ENSG00000166147	NA	NA	NA	NA	NA	15q21.1	NA	NA	Name=4	NA	rs2306352	0.39	0.39	0.422	0.401957	0.2535	0.3522	0.2723	0.7421	0.2382	0.25	0.38	0.23	0.73	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.213237	NA	NA	NA	NA	NA	0.355	NA	4.7465
1177	19	10794630	10794630	G	T	exonic	ILF3	NA	synonymous SNV	ILF3:NM_001137673:exon17:c.G2055T:p.S685S,ILF3:NM_004516:exon17:c.G2043T:p.S681S,ILF3:NM_012218:exon17:c.G2043T:p.S681S,ILF3:NM_017620:exon17:c.G2055T:p.S685S,ILF3:NM_153464:exon17:c.G2043T:p.S681S	exonic	ENSG00000129351	NA	synonymous SNV	ENSG00000129351:ENST00000590869:exon2:c.G72T:p.S24S,ENSG00000129351:ENST00000250241:exon16:c.G2043T:p.S681S,ENSG00000129351:ENST00000588657:exon16:c.G2055T:p.S685S,ENSG00000129351:ENST00000590261:exon16:c.G2043T:p.S681S,ENSG00000129351:ENST00000592763:exon16:c.G2055T:p.S685S,ENSG00000129351:ENST00000318511:exon17:c.G2043T:p.S681S,ENSG00000129351:ENST00000407004:exon17:c.G2055T:p.S685S,ENSG00000129351:ENST00000420083:exon17:c.G2043T:p.S681S,ENSG00000129351:ENST00000449870:exon17:c.G2055T:p.S685S,ENSG00000129351:ENST00000589998:exon17:c.G2043T:p.S681S	Score=469;Name=lod=107	NA	19p13.2	NA	NA	NA	NA	rs2229383	0.64	0.64	0.604	0.663738	0.5994	0.6429	0.7651	0.6929	0.6401	0.6	0.6	0.73	0.68	0.6731	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.062196	NA	NA	0.647674	0.683159	NA	0.551	NA	4.7464926
1177	2	74682512	74682512	C	T	ncRNA_intronic	INO80B-WBP1	NA	NA	NA	intronic	ENSG00000115274	NA	NA	NA	NA	NA	2p13.1	NA	NA	Name=4	NA	rs2268417	0.51	0.51	0.526	0.538538	0.159	0.8214	0.3256	0.8729	0.3364	0.15	0.83	0.27	0.86	0.2809	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.283538	NA	NA	0.147093	0.757376	NA	0.449	NA	4.7463403
1177	17	1674429	1674429	T	C	exonic	SERPINF1	NA	synonymous SNV	SERPINF1:NM_002615:exon4:c.T390C:p.T130T	exonic	ENSG00000132386	NA	synonymous SNV	ENSG00000132386:ENST00000254722:exon4:c.T390C:p.T130T,ENSG00000132386:ENST00000570731:exon4:c.T390C:p.T130T,ENSG00000132386:ENST00000571360:exon4:c.T351C:p.T117T	NA	NA	17p13.3	NA	NA	NA	NA	rs8074840	0.3	0.3	0.245	0.300319	0.3101	0.4067	0.3631	0.1203	0.3793	0.33	0.39	0.32	0.14	0.3161	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.514062	NA	NA	0.294186	0.157739	ID=COSM436124;OCCURENCE=1(breast)	0.239	NA	4.7462806
1177	8	103573001	103573001	C	G	exonic	ODF1	NA	synonymous SNV	ODF1:NM_024410:exon2:c.C642G:p.P214P	exonic	ENSG00000155087	NA	synonymous SNV	ENSG00000155087:ENST00000285402:exon2:c.C642G:p.P214P,ENSG00000155087:ENST00000518835:exon2:c.C21G:p.P7P	Score=284;Name=lod=19	NA	8q22.3	NA	NA	NA	NA	rs3018445	0.49	0.49	NA	0.490615	0.6431	0.3056	0.5043	0.4486	0.5716	0.64	0.31	0.52	0.44	0.6401	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.145106	NA	NA	0.637326	0.455969	NA	0.486	NA	4.7461406
1177	3	60716037	60716037	T	C	intronic	FHIT	NA	NA	NA	ncRNA_exonic	ENSG00000225673	NA	NA	NA	Score=737;Name=lod=1322	NA	3p14.2	NA	NA	NA	NA	rs2363681	0.65	0.65	0.635	0.634385	0.5875	0.8065	0.5216	0.5953	0.638	0.58	0.8	0.54	0.64	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.639982	NA	NA	NA	NA	NA	0.652	NA	4.7458333
1177	4	663908	663908	A	G	UTR3	PDE6B	NM_000283:c.*12A>G,NM_001145291:c.*12A>G,NM_001145292:c.*12A>G	NA	NA	exonic	ENSG00000133256	NA	unknown	UNKNOWN	NA	NA	4p16.3	NA	Name=Pol2,Pol2-4H8	Name=11	NA	rs28675771	0.54	0.54	0.501	0.547923	0.6581	0.4603	0.6441	0.4281	0.6186	0.65	0.44	0.65	0.41	0.6146	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.155443	NA	NA	0.648256	0.444621	NA	0.558	NA	4.7457107
1177	1	206759975	206759975	G	A	intronic	RASSF5	NA	NA	NA	intronic	ENSG00000136653	NA	NA	NA	NA	NA	1q32.1	NA	NA	Name=12	NA	rs10779488	0.25	0.25	0.28	0.244209	0.2545	0.251	0.2003	0.2436	0.2587	0.25	0.28	0.21	0.26	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.291508	NA	NA	NA	NA	NA	0.239	NA	4.7455
1177	13	88032371	88032371	T	A	intergenic	SLITRK6,MIR4500HG	dist=1658888;dist=63871	NA	NA	ncRNA_exonic	ENSG00000228473	NA	NA	NA	Score=557;Name=lod=244	NA	13q31.2	NA	NA	NA	NA	rs61744594	0.23	0.23	0.208	0.226438	0.2545	0.3899	0.2075	0.0461	0.2863	0.24	0.39	0.2	0.05	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.109661	NA	NA	NA	NA	NA	0.196	NA	4.7455
1177	18	72234635	72234635	C	T	exonic	CNDP1	NA	synonymous SNV	CNDP1:NM_032649:exon6:c.C723T:p.Y241Y	exonic	ENSG00000150656	NA	synonymous SNV	ENSG00000150656:ENST00000582365:exon5:c.C594T:p.Y198Y,ENSG00000150656:ENST00000358821:exon6:c.C723T:p.Y241Y	Score=309;Name=lod=24	NA	18q22.3	NA	NA	NA	NA	rs12960862	0.47	0.47	0.455	0.454473	0.671	0.4008	0.4856	0.2852	0.4939	0.67	0.33	0.47	0.32	0.5839	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.739772	NA	NA	0.666279	0.368815	NA	0.543	NA	4.7454876
1177	6	32546818	32546818	C	T	UTR3	HLA-DRB1	NM_002124:c.*50G>A,NM_001243965:c.*50G>A	NA	NA	UTR3	ENSG00000196126	ENST00000360004:c.*50G>A	NA	NA	NA	NA	6p21.32	NA	Name=Pol2-4H8	NA	NA	rs36217730	0.1	0.1	0.105	0.0870607	0.174	0.0298	0.1455	0.0711	0.0368	0.16	0.04	0.14	0.07	0.2648	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.038688	NA	NA	0.14916	0.09284	ID=COSN167736;OCCURENCE=1(large_intestine)	0.138	NA	4.7453734
1178	15	52517737	52517737	A	C	intronic	MYO5C	NA	NA	NA	intronic	ENSG00000128833	NA	NA	NA	NA	NA	15q21.2	NA	Name=PU.1	NA	NA	rs11070887	0.27	0.27	0.278	0.303315	0.0507	0.5556	0.1974	0.385	0.2679	0.05	0.54	0.16	0.4	0.1562	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.16752	2.16752	NA	0.048121	0.328256	NA	0.254	NA	4.744979
1178	7	157361564	157361564	C	T	intronic	PTPRN2	NA	NA	NA	intronic	ENSG00000155093	NA	NA	NA	NA	NA	7q36.3	NA	Name=SREBP1,Pol2	Name=68	NA	rs7789467	0.29	0.29	0.328	0.274161	0.4433	0.0099	0.2752	0.3502	0.2689	0.44	0.01	0.32	0.37	0.3584	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.085509	NA	NA	0.453372	0.361552	NA	0.384	NA	4.744928
1178	18	11639356	11639356	G	C	intergenic	PIEZO2,GNAL	dist=490595;dist=49658	NA	NA	ncRNA_exonic	ENSG00000257513	NA	NA	NA	Score=259;Name=lod=15	NA	18p11.21	NA	NA	NA	NA	rs3928536	0.59	0.59	0.55	0.59365	0.6004	0.748	0.7205	0.3343	0.6881	0.61	0.72	0.68	0.35	0.6549	0.72	0.02	D	.	.	.	.	.	.	0.711	P	.	.	.	.	-0.974	T	0.000	T	.	0.485	6.63	-0.982	-0.334	0.038	.	0.484771	NA	NA	NA	NA	NA	0.159	NA	4.7447
1178	8	145140472	145140472	A	G	intronic	GPAA1	NA	NA	NA	intronic	ENSG00000197858	NA	NA	NA	Score=358;Name=lod=38	NA	8q24.3	NA	NA	NA	NA	rs1127096	0.12	0.12	0.111	0.126398	0.0895	0.001	0.0648	0.3525	0.0317	0.09	0.0017	0.07	0.34	0.0855	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.764606	NA	NA	0.080359	0.312593	NA	0.13	NA	4.744641
1178	11	74419357	74419357	C	T	exonic	CHRDL2	NA	synonymous SNV	CHRDL2:NM_015424:exon5:c.G516A:p.Q172Q	exonic	ENSG00000054938	NA	nonsynonymous SNV	ENSG00000054938:ENST00000376324:exon3:c.G362A:p.R121K	Score=503;Name=lod=147	NA	11q13.4	NA	NA	NA	NA	rs1944937	0.77	0.77	0.748	0.763978	0.7475	0.8006	0.8429	0.7224	0.7434	0.75	0.83	0.82	0.69	0.7614	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.057769	2.057769	1	0.746564	0.729347	ID=COSM1163585;OCCURENCE=1(pancreas)	0.725	NA	4.744536
1178	6	29771080	29771080	G	A	intergenic	LOC554223,HLA-G	dist=5496;dist=23676	NA	NA	ncRNA_exonic	ENSG00000213880	NA	NA	NA	Score=789;Name=lod=2148	NA	6p22.1	NA	NA	NA	NA	rs1610658	0.23	0.23	0.22	0.232428	0.2555	0.1091	0.245	0.2504	0.3027	0.26	0.14	0.22	0.3	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.22989	NA	NA	NA	NA	NA	0.254	NA	4.7445
1178	6	29771421	29771421	G	A	intergenic	LOC554223,HLA-G	dist=5837;dist=23335	NA	NA	ncRNA_exonic	ENSG00000213880	NA	NA	NA	Score=789;Name=lod=2148	NA	6p22.1	NA	NA	NA	NA	rs1610659	0.23	0.23	0.223	0.232228	0.2555	0.1091	0.245	0.2504	0.3016	0.26	0.14	0.22	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.037585	NA	NA	NA	NA	NA	0.225	NA	4.7445
1178	6	29771654	29771654	A	G	intergenic	LOC554223,HLA-G	dist=6070;dist=23102	NA	NA	ncRNA_exonic	ENSG00000213880	NA	NA	NA	Score=789;Name=lod=2148	NA	6p22.1	NA	NA	NA	NA	rs1610661	0.23	0.23	0.231	0.232228	0.2555	0.1091	0.245	0.2504	0.3016	0.26	0.14	0.22	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.496651	NA	NA	NA	NA	NA	0.246	NA	4.7445
1178	6	29798419	29798419	G	A	intronic	HLA-G	NA	NA	NA	intronic	ENSG00000204632	NA	NA	NA	NA	NA	6p22.1	NA	NA	Name=2	NA	rs915670	0.23	0.23	0.222	0.232029	0.2555	0.1091	0.245	0.2504	0.3006	0.26	0.14	0.22	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.222365	NA	NA	NA	NA	NA	0.254	NA	4.7445
1178	9	71224928	71224928	C	A	intergenic	TMEM252,PIP5K1B	dist=69145;dist=95688	NA	NA	ncRNA_exonic	ENSG00000224025	NA	NA	NA	Score=850;Name=lod=3787	NA	9q21.11	NA	NA	NA	NA	rs10869119	0.22	0.22	0.2	0.231629	0.2555	0.1815	0.2896	0.1581	0.317	0.25	0.19	0.3	0.17	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.11213	NA	NA	NA	NA	NA	0.181	NA	4.7445
1178	10	54171313	54171313	C	T	intergenic	DKK1,MBL2	dist=93896;dist=353827	NA	NA	ncRNA_exonic	ENSG00000227972	NA	NA	NA	Score=541;Name=lod=211	NA	10q21.1	NA	NA	NA	NA	rs1194647	0.47	0.47	0.48	0.489217	0.2555	0.6379	0.2839	0.764	0.3507	0.23	0.66	0.31	0.75	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.741324	NA	NA	NA	NA	NA	0.406	NA	4.7445
1178	4	74302870	74302870	T	C	intronic	AFP	NA	NA	NA	intronic	ENSG00000081051	NA	NA	NA	Score=313;Name=lod=25	NA	4q13.3	NA	Name=HEY1	NA	NA	rs16849384	0.43	0.43	0.392	0.423722	0.4245	0.4206	0.5519	0.3396	0.4489	0.42	0.45	0.53	0.34	0.4233	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.463027	1.463027	NA	0.407886	0.372674	NA	0.493	NA	4.744314
1178	17	81043039	81043039	A	G	exonic	METRNL	NA	synonymous SNV	METRNL:NM_001004431:exon2:c.A396G:p.P132P	exonic	ENSG00000176845	NA	synonymous SNV	ENSG00000176845:ENST00000571814:exon1:c.A150G:p.P50P,ENSG00000176845:ENST00000320095:exon2:c.A396G:p.P132P,ENSG00000176845:ENST00000570778:exon2:c.A150G:p.P50P	Score=366;Name=lod=41	NA	17q25.3	NA	NA	NA	NA	rs9908756	0.77	0.77	0.78	0.786741	0.6213	0.9167	0.7507	0.8517	0.7607	0.65	0.92	0.69	0.84	0.6889	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.743219	NA	NA	0.612326	0.827508	ID=COSM437858;OCCURENCE=1(breast)	0.79	NA	4.7441406
1178	2	228102752	228102752	C	A	ncRNA_intronic	LOC654841	NA	NA	NA	ncRNA_exonic	ENSG00000236432	NA	NA	NA	NA	NA	2q36.3	NA	Name=FOXA1_(SC-101058)	NA	NA	rs1882435	0.35	0.35	0.324	0.305112	0.3201	0.4206	0.2896	0.2504	0.2556	0.32	0.45	0.3	0.3	0.3078	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.399495	NA	NA	0.294787	0.262629	ID=COSN166420;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.312	NA	4.7439796
1178	3	60716214	60716214	T	C	intronic	FHIT	NA	NA	NA	ncRNA_exonic	ENSG00000225673	NA	NA	NA	Score=596;Name=lod=351	NA	3p14.2	NA	NA	NA	NA	rs6764043	0.65	0.65	0.653	0.635783	0.5895	0.8056	0.5216	0.5961	0.6431	0.59	0.8	0.54	0.64	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.685026	NA	NA	NA	NA	NA	0.652	NA	4.7438333
1178	4	71384579	71384579	G	A	intronic	AMTN	NA	NA	NA	intronic	ENSG00000187689	NA	NA	NA	NA	NA	4q13.3	NA	Name=CEBPB,JunD,STAT3	Name=21	NA	rs35692424	0.31	0.31	0.27	0.272764	0.4453	0.1994	0.4568	0.1127	0.2566	0.45	0.21	0.43	0.12	0.3695	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.597472	NA	NA	0.441395	0.180209	NA	0.29	NA	4.743805
1178	6	42672434	42672434	C	T	intronic	PRPH2	NA	NA	NA	intronic	ENSG00000112619	NA	NA	NA	NA	NA	6p21.1	NA	Name=HEY1,Pol2,TAF7_(SQ-8),Pol2-4H8	NA	NA	rs34722725	0.29	0.29	0.236	0.273962	0.2565	0.4673	0.3285	0.1573	0.2117	0.25	0.44	0.32	0.16	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.323071	NA	NA	NA	NA	NA	0.304	NA	4.7435
1178	6	31378387	31378387	T	C	exonic	MICA	NA	synonymous SNV	MICA:NM_000247:exon2:c.T138C:p.L46L,MICA:NM_001177519:exon2:c.T138C:p.L46L	exonic	ENSG00000204520	NA	synonymous SNV	ENSG00000204520:ENST00000421350:exon2:c.T99C:p.L33L,ENSG00000204520:ENST00000449934:exon2:c.T138C:p.L46L	NA	NA	6p21.33	NA	NA	NA	NA	rs1063631	0.36	0.36	0.309	0.365216	0.3141	0.3016	0.4078	0.4788	0.2996	0.32	0.27	0.46	0.46	0.3322	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.202734	NA	NA	0.27687	0.414017	ID=COSM1311988;OCCURENCE=1(urinary_tract)	0.225	NA	4.7434966
1178	3	98536571	98536571	T	C	intronic	DCBLD2	NA	NA	NA	intronic	ENSG00000057019	NA	NA	NA	NA	NA	3q12.1	NA	Name=CTCF,Rad21,CTCF_(C-20),SMC3_(ab9263),CTCF_(SC-5916)	Name=137	NA	rs1440150	0.35	0.35	0.372	0.361022	0.4076	0.2262	0.3559	0.4554	0.3282	0.43	0.19	0.34	0.41	0.4132	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.527245	NA	NA	0.436061	0.467163	NA	0.377	NA	4.743139
1178	3	156881392	156881392	T	G	intergenic	CCNL1,VEPH1	dist=2910;dist=96140	NA	NA	ncRNA_exonic	ENSG00000241770,ENSG00000244515	NA	NA	NA	Score=667;Name=lod=684	NA	3q25.31	NA	NA	NA	NA	rs12630209	0.27	0.27	0.221	0.241813	0.2575	0.3333	0.4769	0.0787	0.1851	0.25	0.36	0.43	0.08	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.180006	NA	NA	NA	NA	NA	0.174	NA	4.7425
1178	6	75320266	75320266	A	G	intergenic	CD109,COL12A1	dist=782225;dist=473776	NA	NA	ncRNA_exonic	ENSG00000218483	NA	NA	NA	NA	NA	6q13	NA	NA	Name=19	NA	rs487580	0.45	0.45	0.46	0.439097	0.2575	0.5308	0.3228	0.764	0.1748	0.26	0.55	0.3	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.604145	NA	NA	NA	NA	NA	0.391	NA	4.7425
1178	7	138386589	138386589	C	T	intergenic	SVOPL,ATP6V0A4	dist=22799;dist=4450	NA	NA	ncRNA_exonic	ENSG00000223721	NA	NA	NA	Score=656;Name=lod=618	NA	7q34	NA	NA	NA	NA	rs13238736	0.22	0.22	0.21	0.221446	0.2575	0.2292	0.3473	0.1634	0.1656	0.25	0.17	0.31	0.16	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.278129	NA	NA	NA	NA	NA	0.138	NA	4.7425
1178	10	28725475	28725475	G	A	intergenic	MPP7,WAC-AS1	dist=154408;dist=83371	NA	NA	ncRNA_exonic	ENSG00000224439	NA	NA	NA	Score=805;Name=lod=2496	NA	10p12.1	NA	NA	NA	NA	rs72807799	0.12	0.12	0.109	0.111222	0.2575	0.005	0.1571	0.0393	0.135	0.24	0.01	0.16	0.05	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.243359	NA	NA	NA	NA	NA	0.254	NA	4.7425
1178	13	99293141	99293141	G	T	intergenic	STK24,SLC15A1	dist=63745;dist=42914	NA	NA	ncRNA_exonic	ENSG00000233662	NA	NA	NA	Score=732;Name=lod=1258	NA	13q32.2	NA	NA	NA	NA	rs16951591	0.22	0.22	0.201	0.228634	0.2575	0.2024	0.1816	0.1853	0.318	0.27	0.18	0.18	0.21	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.205387	NA	NA	NA	NA	NA	0.188	NA	4.7425
1178	20	1651602	1651602	G	A	intergenic	SIRPG,LOC100289473	dist=13177;dist=102409	NA	NA	ncRNA_exonic	ENSG00000223750	NA	NA	NA	Score=333;Name=lod=30	NA	20p13	NA	NA	NA	NA	rs968860	0.33	0.33	0.317	0.360623	0.2575	0.6151	0.2478	0.1815	0.5266	0.27	0.58	0.26	0.18	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.15759	NA	NA	NA	NA	NA	0.261	NA	4.7425
1178	10	88414570	88414570	G	A	exonic	OPN4	NA	synonymous SNV	OPN4:NM_001030015:exon1:c.G30A:p.P10P,OPN4:NM_033282:exon1:c.G30A:p.P10P	exonic	ENSG00000122375	NA	synonymous SNV	ENSG00000122375:ENST00000241891:exon1:c.G30A:p.P10P,ENSG00000122375:ENST00000372071:exon1:c.G30A:p.P10P,ENSG00000122375:ENST00000443292:exon1:c.G30A:p.P10P	NA	NA	10q23.2	NA	NA	NA	NA	rs11202106	0.22	0.22	0.205	0.236022	0.3022	0.2778	0.1758	0.062	0.4029	0.3	0.27	0.17	0.08	0.2947	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.032395	NA	NA	0.327791	0.098048	NA	0.181	NA	4.7419756
1178	11	17517235	17517235	A	G	intronic	USH1C	NA	NA	NA	intronic	ENSG00000006611	NA	NA	NA	Score=329;Name=lod=29	NA	11p15.1	NA	NA	NA	NA	rs10832795	0.39	0.39	0.358	0.369808	0.4384	0.3194	0.4798	0.2216	0.4734	0.44	0.34	0.46	0.3	0.4062	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.267185	NA	NA	0.41358	0.232045	NA	0.348	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000041284.1;CLNDSDB=.;CLNDSDBID=.	4.74182
1178	3	156881002	156881002	T	C	intergenic	CCNL1,VEPH1	dist=2520;dist=96530	NA	NA	ncRNA_exonic	ENSG00000244515	NA	NA	NA	Score=519;Name=lod=172	NA	3q25.31	NA	NA	NA	NA	rs10936066	0.27	0.27	0.225	0.23722	0.2584	0.3333	0.4741	0.0628	0.184	0.25	0.36	0.43	0.07	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.892688	NA	NA	NA	NA	NA	0.174	NA	4.7416
1178	3	156881559	156881559	A	G	intergenic	CCNL1,VEPH1	dist=3077;dist=95973	NA	NA	ncRNA_exonic	ENSG00000244515	NA	NA	NA	Score=329;Name=lod=29	NA	3q25.31	NA	NA	NA	NA	rs62274155	0.27	0.27	0.209	0.242412	0.2584	0.3343	0.4784	0.0787	0.1851	0.25	0.36	0.43	0.08	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.104756	NA	NA	NA	NA	NA	0.174	NA	4.7416
1178	3	156881588	156881588	C	T	intergenic	CCNL1,VEPH1	dist=3106;dist=95944	NA	NA	ncRNA_exonic	ENSG00000244515	NA	NA	NA	Score=329;Name=lod=29	NA	3q25.31	NA	NA	NA	NA	rs62274156	0.27	0.27	0.227	0.242612	0.2584	0.3333	0.4784	0.0794	0.1861	0.25	0.36	0.43	0.09	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.299617	NA	NA	NA	NA	NA	0.174	NA	4.7416
1178	5	40067133	40067133	T	C	intergenic	DAB2,PTGER4	dist=641798;dist=612899	NA	NA	ncRNA_exonic	ENSG00000249668	NA	NA	NA	Score=387;Name=lod=50	NA	5p13.1	NA	NA	NA	NA	rs35313658	0.24	0.24	0.213	0.222843	0.2584	0.1518	0.3573	0.1793	0.2229	0.29	0.16	0.32	0.18	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.724054	NA	NA	NA	NA	NA	0.232	NA	4.7416
1178	9	116838743	116838743	C	A	intronic	AMBP	NA	NA	NA	intronic	ENSG00000106927	NA	NA	NA	NA	NA	9q32	NA	Name=CTCF	NA	NA	rs2567700	0.28	0.28	0.243	0.271366	0.2584	0.4444	0.3559	0.1377	0.227	0.23	0.45	0.33	0.1	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.182648	NA	NA	NA	NA	NA	0.261	NA	4.7416
1178	10	99125722	99125722	A	G	intronic	RRP12	NA	NA	NA	intronic	ENSG00000052749	NA	NA	NA	NA	NA	10q24.1	NA	NA	Name=8	NA	rs11189167	0.25	0.25	0.222	0.271965	0.2584	0.3095	0.2651	0.1762	0.3814	0.25	0.28	0.26	0.18	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.028586	NA	NA	NA	NA	NA	0.196	NA	4.7416
1178	17	51512315	51512315	T	C	intergenic	C17orf112,KIF2B	dist=447303;dist=387924	NA	NA	ncRNA_exonic	ENSG00000262271	NA	NA	NA	Score=673;Name=lod=726	NA	17q22	NA	NA	NA	NA	rs9914240	0.4	0.4	0.382	0.445687	0.2584	0.5526	0.4222	0.4788	0.5	0.26	0.54	0.35	0.47	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.044401	NA	NA	NA	NA	NA	0.391	NA	4.7416
1178	12	122626381	122626381	G	A	UTR3	MLXIP	NM_014938:c.*22G>A	NA	NA	UTR3	ENSG00000175727	ENST00000319080:c.*22G>A,ENST00000538698:c.*22G>A	NA	NA	NA	NA	12q24.31	Score=907;Name=V$OCT1_06	NA	NA	NA	rs11057509	0.17	0.17	0.145	0.165335	0.2217	0.2312	0.1628	0.0431	0.2065	0.2	0.23	0.17	0.03	0.1939	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.480027	NA	NA	0.176325	0.056002	NA	0.152	NA	4.7414084
1178	6	31379773	31379773	C	T	exonic	MICA	NA	synonymous SNV	MICA:NM_000247:exon4:c.C663T:p.I221I,MICA:NM_001177519:exon4:c.C663T:p.I221I	exonic	ENSG00000204520	NA	synonymous SNV	ENSG00000204520:ENST00000421350:exon3:c.C336T:p.I112I,ENSG00000204520:ENST00000449934:exon4:c.C663T:p.I221I	NA	NA	6p21.33	NA	NA	NA	NA	rs1051796	0.37	0.37	0.274	0.363618	0.3141	0.3006	0.4049	0.4766	0.2975	0.32	0.28	0.46	0.46	0.3243	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.034326	NA	NA	0.286926	0.418353	NA	0.13	NA	4.7413406
1178	10	70392375	70392375	G	A	intronic	TET1	NA	NA	NA	ncRNA_exonic	ENSG00000213025	NA	NA	NA	Score=441;Name=lod=83	NA	10q21.3	NA	NA	NA	NA	rs1747	0.42	0.42	0.408	0.451677	0.5924	0.5397	0.4006	0.2489	0.5266	0.52	0.45	0.41	0.22	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.055879	NA	NA	NA	NA	NA	0.428	NA	4.7409333
1178	12	101462039	101462039	A	G	intronic	ANO4	NA	NA	NA	ncRNA_intronic	ENSG00000258033	NA	NA	NA	Score=721;Name=lod=1139	NA	12q23.1	NA	NA	NA	NA	rs613778	0.74	0.74	0.722	0.779153	0.5924	0.8938	0.7147	0.8442	0.8108	0.58	0.89	0.73	0.81	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.489821	NA	NA	NA	NA	NA	0.645	NA	4.7409333
1178	16	88666048	88666048	G	A	intronic	ZC3H18	NA	NA	NA	intronic	ENSG00000158545	NA	NA	NA	NA	NA	16q24.2	NA	NA	Name=24	NA	rs62050304	0.23	0.23	0.197	0.208466	0.2594	0.3462	0.2075	0.059	0.2168	0.25	0.34	0.24	0.07	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.025724	NA	NA	NA	NA	NA	0.181	NA	4.7406
1178	15	52539673	52539673	C	T	exonic	MYO5C	NA	synonymous SNV	MYO5C:NM_018728:exon15:c.G1863A:p.R621R	exonic	ENSG00000128833	NA	synonymous SNV	ENSG00000128833:ENST00000261839:exon15:c.G1863A:p.R621R	Score=444;Name=lod=85	NA	15q21.2	Score=947;Name=V$CETS1P54_01	NA	NA	NA	rs10163109	0.88	0.88	0.881	0.863818	0.9901	0.8681	0.8703	0.6944	0.954	0.99	0.86	0.9	0.7	0.9466	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.875954	NA	NA	0.989609	0.75271	NA	0.899	NA	4.7403576
1178	14	106877837	106877837	C	A	intergenic	LINC00226,LINC00221	dist=132871;dist=60618	NA	NA	exonic	ENSG00000211959	NA	nonsynonymous SNV	ENSG00000211959:ENST00000390619:exon2:c.G157T:p.G53C	NA	NA	14q32.33	NA	NA	NA	NA	rs145759866	0.1	0.1	0.097	NA	NA	NA	NA	NA	NA	0.09	0.06	0.09	0.17	0.0933	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.795826	1.795826	NA	NA	NA	NA	NA	NA	4.7400334
1178	16	1034954	1034954	T	C	exonic	SOX8	NA	synonymous SNV	SOX8:NM_014587:exon3:c.T909C:p.Y303Y	exonic	ENSG00000005513	NA	synonymous SNV	ENSG00000005513:ENST00000293894:exon3:c.T909C:p.Y303Y	NA	NA	16p13.3	NA	NA	NA	NA	rs11542178	0.31	0.31	0.29	0.343051	0.3091	0.1052	0.2867	0.5772	0.3466	0.31	0.11	0.26	0.58	0.3395	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.057154	NA	NA	0.27813	0.558498	NA	0.246	NA	4.7399366
1178	6	163378291	163378291	G	A	intronic	PACRG	NA	NA	NA	ncRNA_exonic	ENSG00000217557	NA	NA	NA	Score=618;Name=lod=434	NA	6q26	NA	NA	NA	NA	rs7765189	0.52	0.52	0.501	0.517971	0.5934	0.5099	0.4986	0.3843	0.6431	0.59	0.54	0.55	0.38	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.427342	NA	NA	NA	NA	NA	0.572	NA	4.7399333
1178	13	20398669	20398669	T	C	exonic	ZMYM5	NA	nonsynonymous SNV	ZMYM5:NM_001142684:exon8:c.A1958G:p.H653R	exonic	ENSG00000132950	NA	nonsynonymous SNV	ENSG00000132950:ENST00000502168:exon6:c.A1928G:p.H643R,ENSG00000132950:ENST00000337963:exon8:c.A1958G:p.H653R	NA	NA	13q12.11	NA	NA	NA	NA	rs9508907	0.82	0.82	0.819	0.798522	0.8628	0.9554	0.8386	0.5378	0.8947	0.89	0.98	0.81	0.55	0.865	0.98	0.61	T	0.139	B	0.026	B	0.079	N	1.000	P	0.55	N	2.32	T	-0.998	T	0.000	T	0.041	-0.946	0.35	1.38	0.039	-0.032	6.692	-0.945577	NA	0.83	0.865857	0.601722	NA	0.761	NA	4.7396764
1178	1	248112915	248112915	A	G	exonic	OR2L8	NA	synonymous SNV	OR2L8:NM_001001963:exon1:c.A756G:p.A252A	exonic	ENSG00000196936	NA	synonymous SNV	ENSG00000196936:ENST00000357191:exon1:c.A756G:p.A252A	NA	NA	1q44	NA	NA	NA	NA	rs10888280	0.3	0.3	0.232	0.309904	0.2952	0.4216	0.3458	0.1354	0.4202	0.3	0.4	0.36	0.13	0.3268	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.582073	NA	NA	0.305026	0.152746	NA	0.123	NA	4.7396406
1178	1	146523303	146523303	C	T	intergenic	LOC728989,PRKAB2	dist=8704;dist=103382	NA	NA	ncRNA_exonic	ENSG00000225603	NA	NA	NA	Score=658;Name=lod=629	NA	1q21.1	NA	NA	NA	NA	rs12723253	0.15	0.15	0.153	0.124601	0.2604	0.0268	0.1369	0.1218	0.0808	0.27	0.02	0.17	0.11	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.061628	NA	NA	NA	NA	NA	0.181	NA	4.7396
1178	1	161187665	161187665	C	T	intronic	FCER1G	NA	NA	NA	intronic	ENSG00000158869	NA	NA	NA	NA	NA	1q23.3	Score=793;Name=V$SRF_C	NA	NA	NA	rs2070902	0.35	0.35	0.341	0.367812	0.2604	0.3968	0.353	0.41	0.4018	0.26	0.41	0.32	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.645462	NA	NA	NA	NA	NA	0.319	NA	4.7396
1178	2	47273668	47273668	G	A	intronic	TTC7A	NA	NA	NA	intronic	ENSG00000068724	NA	NA	NA	NA	NA	2p21	NA	NA	Name=16	NA	rs12712986	0.25	0.25	0.261	0.228235	0.2604	0.1647	0.2248	0.2973	0.1697	0.27	0.21	0.24	0.28	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.815559	NA	NA	NA	NA	NA	0.312	NA	4.7396
1178	2	101627852	101627852	C	T	intronic	RPL31,TBC1D8	NA	NA	NA	intronic	ENSG00000071082,ENSG00000204634	NA	NA	NA	NA	NA	2q11.2	NA	Name=Pol2	NA	NA	rs1062059	0.2	0.2	0.183	0.153554	0.2604	0.125	0.1902	0.0953	0.1258	0.27	0.18	0.22	0.11	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.074356	NA	NA	NA	NA	NA	0.246	NA	4.7396
1178	12	99640557	99640557	T	C	exonic	ANKS1B	NA	synonymous SNV	ANKS1B:NM_152788:exon13:c.A1842G:p.P614P	exonic	ENSG00000185046	NA	synonymous SNV	ENSG00000185046:ENST00000547010:exon6:c.A582G:p.P194P,ENSG00000185046:ENST00000329257:exon13:c.A1842G:p.P614P,ENSG00000185046:ENST00000547776:exon13:c.A1842G:p.P614P	Score=609;Name=lod=399	NA	12q23.1	NA	NA	NA	NA	rs1552759	0.62	0.62	0.593	0.632188	0.6083	0.9087	0.647	0.3003	0.8098	0.61	0.91	0.6	0.31	0.6622	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.820339	NA	NA	0.65708	0.362447	NA	0.558	NA	4.7390866
1178	19	58291228	58291228	A	G	UTR3	ZNF586	NM_001077426:c.*513A>G,NM_001204814:c.*64A>G,NM_017652:c.*64A>G	NA	NA	UTR3	ENSG00000083828	ENST00000391702:c.*64A>G,ENST00000396154:c.*64A>G,ENST00000396150:c.*513A>G	NA	NA	Score=309;Name=lod=24	NA	19q13.43	NA	NA	NA	NA	rs2158013	0.72	0.72	0.727	0.682308	0.5944	0.7113	0.6715	0.9516	0.3865	0.6	0.7	0.67	0.95	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.11808	NA	NA	NA	NA	NA	0.703	NA	4.7389334
1178	7	157931119	157931119	A	G	exonic	PTPRN2	NA	synonymous SNV	PTPRN2:NM_130842:exon6:c.T948C:p.A316A,PTPRN2:NM_002847:exon7:c.T999C:p.A333A,PTPRN2:NM_130843:exon7:c.T999C:p.A333A	exonic	ENSG00000155093	NA	synonymous SNV	ENSG00000155093:ENST00000389416:exon6:c.T948C:p.A316A,ENSG00000155093:ENST00000409483:exon6:c.T885C:p.A295A,ENSG00000155093:ENST00000389413:exon7:c.T999C:p.A333A,ENSG00000155093:ENST00000389418:exon7:c.T999C:p.A333A,ENSG00000155093:ENST00000404321:exon7:c.T1068C:p.A356A	NA	NA	7q36.3	NA	NA	NA	NA	rs1130500	0.41	0.41	0.39	0.378794	0.2903	0.4663	0.4409	0.4516	0.2372	0.3	0.53	0.37	0.49	0.3423	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.330528	NA	NA	0.295349	0.448025	NA	0.428	NA	4.7387176
1178	6	51275042	51275042	T	C	intergenic	TFAP2B,PKHD1	dist=459716;dist=205103	NA	NA	ncRNA_exonic	ENSG00000232702	NA	NA	NA	Score=811;Name=lod=2647	NA	6p12.3	NA	NA	NA	NA	rs62458490	0.33	0.33	0.287	0.335863	0.2614	0.255	0.5072	0.3956	0.2935	0.26	0.26	0.47	0.41	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.427201	NA	NA	NA	NA	ID=COSM150103;OCCURENCE=1(stomach)	0.362	NA	4.7386
1178	8	22069018	22069018	C	T	intronic	BMP1	NA	NA	NA	intronic	ENSG00000168487	NA	NA	NA	NA	NA	8p21.3	NA	Name=STAT3	NA	NA	rs11778448	0.2	0.2	0.183	0.189696	0.2614	0.0079	0.1441	0.3684	0.0941	0.26	0.0035	0.15	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.388069	NA	NA	NA	NA	NA	0.261	NA	4.7386
1178	11	57369730	57369730	G	A	intronic	SERPING1	NA	NA	NA	intronic	ENSG00000149131	NA	NA	NA	NA	NA	11q12.1	NA	NA	NA	NA	rs11229063	0.17	0.17	0.16	0.147364	0.2614	0.0952	0.1643	0.0855	0.1554	0.25	0.11	0.18	0.09	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.504247	3.504247	NA	NA	NA	NA	0.087	CLINSIG=other;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000077812.1;CLNDSDB=.;CLNDSDBID=.	4.7386
1178	13	95410508	95410508	G	T	intergenic	SOX21,ABCC4	dist=46119;dist=261575	NA	NA	ncRNA_exonic	ENSG00000235768	NA	NA	NA	Score=602;Name=lod=372	NA	13q32.1	NA	NA	NA	NA	rs4773813	0.22	0.22	0.218	0.203075	0.2614	0.0883	0.232	0.2806	0.136	0.25	0.08	0.28	0.3	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.141449	NA	NA	NA	NA	NA	0.348	NA	4.7386
1178	16	81941444	81941444	C	T	intronic	PLCG2	NA	NA	NA	intronic	ENSG00000197943	NA	NA	NA	NA	NA	16q23.3	NA	Name=NF-YB	NA	NA	rs71400183	0.19	0.19	0.167	0.191494	0.2614	0.1339	0.1816	0.1445	0.2495	0.24	0.15	0.2	0.16	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.819185	NA	NA	NA	NA	NA	0.116	NA	4.7386
1178	14	81288989	81288989	G	C	intronic	CEP128	NA	NA	NA	ncRNA_exonic	ENSG00000258452	NA	NA	NA	Score=505;Name=lod=151	NA	14q31.1	NA	NA	NA	NA	rs9323694	0.65	0.65	0.588	0.610823	0.5954	0.8115	0.6225	0.5772	0.4571	0.59	0.8	0.62	0.57	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.268714	NA	1	NA	NA	NA	0.58	NA	4.7379333
1178	3	42750446	42750446	G	A	UTR3	CCDC13	NM_144719:c.*26C>T	NA	NA	UTR3	ENSG00000244607	ENST00000310232:c.*26C>T	NA	NA	NA	NA	3p22.1	NA	NA	Name=2	NA	rs2240860	0.25	0.25	0.258	0.245407	0.1899	0.2956	0.2089	0.2247	0.3047	0.19	0.32	0.23	0.27	0.2213	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.221397	NA	NA	0.184302	0.241262	NA	0.239	NA	4.7378314
1178	22	25045855	25045855	G	A	ncRNA_exonic	BCRP3	NA	NA	NA	ncRNA_exonic	ENSG00000215481	NA	NA	NA	Score=608;Name=lod=393	NA	22q11.23	NA	NA	NA	NA	rs738818	0.45	0.45	0.419	0.499601	0.4543	0.3651	0.5418	0.7519	0.3139	0.4	0.28	0.47	0.69	0.4746	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.173082	NA	NA	NA	NA	ID=COSN166725;OCCURENCE=1(haematopoietic_and_lymphoid_tissue),1(liver)	NA	NA	4.7377666
1178	2	97544089	97544089	G	C	intronic	FAM178B	NA	NA	NA	intronic	ENSG00000168754	NA	NA	NA	NA	NA	2q11.2	NA	NA	Name=3	NA	rs6750988	0.5	0.5	0.467	0.567093	0.2624	0.7202	0.5245	0.5303	0.8027	0.27	0.76	0.49	0.55	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.328845	NA	NA	NA	NA	NA	0.399	NA	4.7376
1178	16	10776063	10776063	G	T	intronic	TEKT5	NA	NA	NA	intronic	ENSG00000153060	NA	NA	NA	NA	NA	16p13.13	NA	Name=HNF4A_(H-171),CEBPB,HNF4G_(SC-6558)	NA	NA	rs10221071	0.3	0.3	0.32	0.32508	0.2624	0.25	0.2219	0.4811	0.3292	0.27	0.28	0.2	0.45	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.436641	NA	NA	NA	NA	NA	0.377	NA	4.7376
1178	4	1729425	1729425	C	G	intronic	TACC3	NA	NA	NA	intronic	ENSG00000013810	NA	NA	NA	NA	NA	4p16.3	NA	Name=c-Jun,c-Fos,STAT3,JunD	Name=115	NA	rs2592828	0.32	0.32	0.315	0.309505	0.4394	0.1597	0.3199	0.3359	0.2873	0.44	0.18	0.32	0.31	0.3799	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.412263	NA	NA	0.443217	0.355897	NA	0.435	NA	4.737483
1178	7	89938588	89938588	C	G	exonic	C7orf63	NA	nonsynonymous SNV	C7orf63:NM_001039706:exon22:c.C2562G:p.S854R,C7orf63:NM_001160138:exon22:c.C2508G:p.S836R	exonic	ENSG00000105792	NA	nonsynonymous SNV	ENSG00000105792:ENST00000449577:exon10:c.C1173G:p.S391R,ENSG00000105792:ENST00000316089:exon21:c.C2424G:p.S808R,ENSG00000105792:ENST00000389297:exon22:c.C2562G:p.S854R,ENSG00000105792:ENST00000497910:exon22:c.C2508G:p.S836R	NA	NA	7q21.13	NA	NA	NA	NA	rs7803620	0.91	0.91	0.908	0.922125	0.8688	0.999	0.8963	0.8933	0.955	0.88	1	0.89	0.87	0.8841	1	1	T	0.0	B	0.001	B	0.047	N	1.000	P	-1.67	N	2.6	T	-1.006	T	0.000	T	0.218	-2.166	0.005	-1.07	-0.568	0.391	2.532	-2.165806	NA	1	0.842973	0.883092	NA	0.899	NA	4.7374604
1178	11	64026144	64026144	G	A	exonic	PLCB3	NA	synonymous SNV	PLCB3:NM_001184883:exon9:c.G1011A:p.S337S,PLCB3:NM_000932:exon11:c.G1212A:p.S404S	exonic	ENSG00000149782	NA	synonymous SNV	ENSG00000149782:ENST00000325234:exon9:c.G1011A:p.S337S,ENSG00000149782:ENST00000279230:exon11:c.G1212A:p.S404S,ENSG00000149782:ENST00000540288:exon11:c.G1212A:p.S404S	Score=507;Name=lod=154	NA	11q13.1	NA	NA	NA	NA	rs2244625	0.43	0.43	0.412	0.408946	0.667	0.2688	0.5202	0.1611	0.544	0.68	0.27	0.53	0.17	0.5813	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.291422	NA	NA	0.68094	0.240118	NA	0.514	NA	4.7374266
1178	8	6303025	6303025	G	A	exonic	MCPH1	NA	synonymous SNV	MCPH1:NM_001172575:exon7:c.G1638A:p.T546T,MCPH1:NM_001172574:exon8:c.G1782A:p.T594T,MCPH1:NM_024596:exon8:c.G1782A:p.T594T	exonic	ENSG00000147316	NA	synonymous SNV	ENSG00000147316:ENST00000522905:exon7:c.G1638A:p.T546T,ENSG00000147316:ENST00000344683:exon8:c.G1782A:p.T594T,ENSG00000147316:ENST00000519480:exon8:c.G1782A:p.T594T	NA	NA	8p23.1	NA	NA	NA	NA	rs2584	0.18	0.18	0.149	0.132188	0.338	0.0268	0.245	0.0174	0.1043	0.36	0.03	0.28	0.02	0.2616	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.160802	NA	NA	0.329678	0.066275	NA	0.145	NA	4.7373886
1178	4	94316763	94316763	T	G	exonic	GRID2	NA	synonymous SNV	GRID2:NM_001510:exon9:c.T1251G:p.G417G	exonic	ENSG00000152208	NA	synonymous SNV	ENSG00000152208:ENST00000510992:exon8:c.T966G:p.G322G,ENSG00000152208:ENST00000282020:exon9:c.T1251G:p.G417G	Score=621;Name=lod=446	NA	4q22.2	NA	NA	NA	NA	rs1385405	0.72	0.72	0.716	0.75599	0.6272	0.7331	0.5951	0.9599	0.7505	0.61	0.7	0.62	0.96	0.6722	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.015198	NA	NA	0.630147	0.921471	ID=COSM1130993;OCCURENCE=1(prostate)	0.746	NA	4.7371196
1178	20	6751034	6751034	A	G	exonic	BMP2	NA	synonymous SNV	BMP2:NM_001200:exon2:c.A261G:p.S87S	exonic	ENSG00000125845	NA	synonymous SNV	ENSG00000125845:ENST00000378827:exon2:c.A261G:p.S87S	Score=682;Name=lod=789	NA	20p12.3	NA	NA	NA	NA	rs1049007	0.75	0.75	0.739	0.746006	0.6262	0.8433	0.7291	0.8964	0.5777	0.63	0.82	0.69	0.89	0.6723	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.055089	NA	NA	0.631224	0.858701	ID=COSM444257;OCCURENCE=3(breast),1(large_intestine)	0.652	NA	4.7369426
1178	2	171910256	171910256	T	C	intronic	TLK1	NA	NA	NA	intronic	ENSG00000198586	NA	NA	NA	NA	NA	2q31.1	NA	NA	Name=2	NA	rs73027271	0.11	0.11	0.112	0.111621	0.0865	NA	0.0865	0.3018	0.0133	0.08	NA	0.11	0.29	0.0856	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.281615	NA	NA	0.091047	0.243078	NA	0.167	NA	4.736853
1178	3	27332302	27332302	G	T	intronic	NEK10	NA	NA	NA	intronic	ENSG00000163491	NA	NA	NA	NA	NA	3p24.1	NA	NA	Name=23	NA	rs674798	0.36	0.36	0.377	0.389776	0.2634	0.1776	0.2608	0.8502	0.2076	0.25	0.14	0.27	0.83	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.074142	NA	NA	NA	NA	NA	0.457	NA	4.7366
1178	5	74178511	74178511	C	T	intergenic	FAM169A,GCNT4	dist=15848;dist=144778	NA	NA	ncRNA_exonic	ENSG00000212363	NA	NA	NA	Score=378;Name=lod=46	NA	5q13.3	NA	NA	NA	NA	rs6872607	0.39	0.39	0.376	0.403554	0.2634	0.1935	0.3357	0.8714	0.18	0.24	0.17	0.37	0.88	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.685222	2.685222	NA	NA	NA	NA	0.478	NA	4.7366
1178	14	70527420	70527420	G	A	intronic	SLC8A3	NA	NA	NA	intronic	ENSG00000100678	NA	NA	NA	Score=383;Name=lod=48	NA	14q24.2	NA	NA	NA	NA	rs45554836	0.08	0.08	0.081	0.0752796	0.0934	NA	0.0375	0.1604	0.046	0.1	NA	0.04	0.16	0.0852	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.616462	1.616462	NA	0.084882	0.141553	NA	0.072	NA	4.736518
1178	14	106877836	106877836	C	T	intergenic	LINC00226,LINC00221	dist=132870;dist=60619	NA	NA	exonic	ENSG00000211959	NA	nonsynonymous SNV	ENSG00000211959:ENST00000390619:exon2:c.G158A:p.G53D	NA	NA	14q32.33	NA	NA	NA	NA	rs143740707	0.11	0.11	0.103	0.00219649	0.005	0.002	0.0014	0.0015	0.001	0.09	0.07	0.09	0.18	0.0922	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.241235	NA	NA	NA	NA	NA	0.007	NA	4.7361334
1178	22	32587023	32587023	C	G	exonic	RFPL2	NA	synonymous SNV	RFPL2:NM_006605:exon2:c.G690C:p.T230T,RFPL2:NM_001159545:exon4:c.G603C:p.T201T,RFPL2:NM_001159546:exon4:c.G603C:p.T201T,RFPL2:NM_001098527:exon5:c.G873C:p.T291T	exonic	ENSG00000128253	NA	synonymous SNV	ENSG00000128253:ENST00000248980:exon2:c.G690C:p.T230T,ENSG00000128253:ENST00000248983:exon4:c.G603C:p.T201T,ENSG00000128253:ENST00000400236:exon5:c.G603C:p.T201T,ENSG00000128253:ENST00000400237:exon5:c.G873C:p.T291T	NA	NA	22q12.3	NA	NA	NA	NA	rs16987639	0.41	0.41	0.397	0.484026	0.493	0.1498	0.3804	0.8631	0.3804	0.43	0.12	0.33	0.77	0.4376	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.742353	NA	NA	NA	NA	NA	0.529	NA	4.7360666
1178	5	169568846	169568846	C	T	intergenic	FOXI1,C5orf58	dist=32117;dist=91104	NA	NA	ncRNA_exonic	ENSG00000253219	NA	NA	NA	Score=385;Name=lod=49	NA	5q35.1	NA	NA	NA	NA	rs7729559	0.17	0.17	0.158	0.169329	0.2644	0.1052	0.304	0.0189	0.2454	0.25	0.11	0.28	0.03	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.316914	NA	NA	NA	NA	NA	0.174	NA	4.7356
1178	10	81061724	81061724	G	A	intronic	ZMIZ1	NA	NA	NA	intronic	ENSG00000108175	NA	NA	NA	NA	NA	10q22.3	NA	Name=ZNF263	NA	NA	rs10824740	0.31	0.31	0.312	0.347244	0.2644	0.1508	0.4352	0.5643	0.2791	0.26	0.13	0.37	0.53	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.168262	NA	NA	NA	NA	NA	0.312	NA	4.7356
1178	12	124102216	124102216	G	A	intronic	DDX55	NA	NA	NA	intronic	ENSG00000111364	NA	NA	NA	NA	NA	12q24.31	NA	Name=Pol2-4H8	NA	NA	rs7137473	0.24	0.24	0.238	0.252196	0.2644	0.0159	0.2205	0.4463	0.2434	0.26	0.02	0.21	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.094886	NA	NA	NA	NA	NA	0.232	NA	4.7356
1178	18	8248041	8248041	G	T	intronic	PTPRM	NA	NA	NA	intronic	ENSG00000173482	NA	NA	NA	Score=304;Name=lod=23	NA	18p11.23	NA	NA	NA	NA	rs12964764	0.22	0.22	0.191	0.198083	0.2644	0.1647	0.3084	0.1475	0.1544	0.27	0.16	0.29	0.15	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.533572	NA	NA	NA	NA	NA	0.319	NA	4.7356
1178	7	150440043	150440043	C	T	exonic	GIMAP1-GIMAP5,GIMAP5	NA	synonymous SNV	GIMAP5:NM_018384:exon3:c.C816T:p.L272L,GIMAP1-GIMAP5:NM_001199577:exon6:c.C1428T:p.L476L	exonic	ENSG00000196329	NA	synonymous SNV	ENSG00000196329:ENST00000358647:exon3:c.C816T:p.L272L	NA	NA	7q36.1	NA	NA	NA	NA	rs1046355	0.36	0.36	0.355	0.35024	0.3082	0.3006	0.2565	0.5363	0.2597	0.31	0.3	0.3	0.54	0.3166	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.274475	NA	NA	0.306744	0.529732	NA	0.457	NA	4.7351226
1179	5	179729519	179729519	A	G	exonic	GFPT2	NA	synonymous SNV	GFPT2:NM_005110:exon18:c.T1908C:p.I636I	exonic	ENSG00000131459	NA	synonymous SNV	ENSG00000131459:ENST00000253778:exon18:c.T1908C:p.I636I	Score=433;Name=lod=77	NA	5q35.3	NA	NA	NA	NA	rs1035411	0.74	0.74	0.739	0.711262	0.6571	0.9048	0.6527	0.6952	0.6309	0.66	0.93	0.65	0.7	0.6553	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.751445	NA	NA	0.619609	0.717577	NA	0.717	NA	4.7346576
1179	19	46352203	46352203	C	T	intronic	SYMPK	NA	NA	NA	intronic	ENSG00000125755	NA	NA	NA	NA	NA	19q13.32	NA	Name=CTCF	NA	NA	rs2303013	0.23	0.23	0.219	0.234425	0.2654	0.1647	0.2925	0.211	0.2648	0.26	0.17	0.26	0.23	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.30292	NA	NA	NA	NA	NA	0.21	NA	4.7346
1179	21	20617291	20617291	G	T	intergenic	TMPRSS15,LINC00320	dist=841321;dist=1497622	NA	NA	ncRNA_exonic	ENSG00000226818	NA	NA	NA	Score=721;Name=lod=1138	NA	21q21.1	NA	NA	NA	NA	rs9980261	0.4	0.4	0.397	0.378395	0.2654	0.4107	0.3343	0.5825	0.2168	0.28	0.42	0.34	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.286067	NA	NA	NA	NA	NA	0.478	NA	4.7346
1179	21	20618024	20618024	T	C	intergenic	TMPRSS15,LINC00320	dist=842054;dist=1496889	NA	NA	ncRNA_exonic	ENSG00000226818	NA	NA	NA	Score=813;Name=lod=2694	NA	21q21.1	NA	NA	NA	NA	rs2070524	0.39	0.39	0.388	0.362819	0.2654	0.4077	0.3213	0.5318	0.2178	0.27	0.41	0.33	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.602358	NA	NA	NA	NA	NA	0.457	NA	4.7346
1179	7	138305806	138305806	T	C	exonic	SVOPL	NA	synonymous SNV	SVOPL:NM_174959:exon10:c.A882G:p.A294A,SVOPL:NM_001139456:exon13:c.A1338G:p.A446A	exonic	ENSG00000157703	NA	synonymous SNV	ENSG00000157703:ENST00000288513:exon9:c.A882G:p.A294A,ENSG00000157703:ENST00000441685:exon9:c.A597G:p.A199A,ENSG00000157703:ENST00000421622:exon10:c.A978G:p.A326A,ENSG00000157703:ENST00000436657:exon10:c.A882G:p.A294A,ENSG00000157703:ENST00000419765:exon13:c.A1338G:p.A446A	NA	NA	7q34	NA	NA	NA	NA	rs3734944	0.29	0.29	0.242	0.263379	0.3141	0.3919	0.3444	0.0915	0.2536	0.32	0.4	0.33	0.08	0.2996	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.753564	NA	NA	0.318488	0.123468	NA	0.196	NA	4.7344786
1179	17	5126674	5126674	A	G	exonic	SCIMP	NA	synonymous SNV	SCIMP:NM_001271842:exon2:c.T99C:p.G33G,SCIMP:NM_207103:exon2:c.T99C:p.G33G	exonic	ENSG00000161929	NA	synonymous SNV	ENSG00000161929:ENST00000399600:exon2:c.T99C:p.G33G,ENSG00000161929:ENST00000571800:exon2:c.T99C:p.G33G,ENSG00000161929:ENST00000574081:exon2:c.T99C:p.G33G,ENSG00000161929:ENST00000574297:exon2:c.T99C:p.G33G	NA	NA	17p13.2	NA	Name=Pol2	NA	NA	rs2641256	0.48	0.48	0.448	0.437899	0.66	0.3542	0.6354	0.3268	0.3057	0.65	0.33	0.65	0.29	0.5788	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.359502	2.359502	NA	0.693529	0.370077	NA	0.572	NA	4.7343376
1179	4	155461113	155461113	T	C	exonic	PLRG1	NA	synonymous SNV	PLRG1:NM_001201564:exon11:c.A1005G:p.Q335Q,PLRG1:NM_002669:exon11:c.A1032G:p.Q344Q	exonic	ENSG00000171566	NA	synonymous SNV	ENSG00000171566:ENST00000302078:exon11:c.A1005G:p.Q335Q,ENSG00000171566:ENST00000393905:exon11:c.A1032G:p.Q344Q,ENSG00000171566:ENST00000499023:exon11:c.A1032G:p.Q344Q	NA	NA	4q31.3	NA	NA	NA	NA	rs7671792	0.21	0.21	0.212	0.231629	0.325	0.1438	0.1888	0.1536	0.362	0.3	0.13	0.21	0.15	0.2785	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.75598	NA	NA	0.328953	0.178847	NA	0.225	NA	4.7342136
1179	4	89670155	89670155	C	T	exonic	FAM13A	NA	synonymous SNV	FAM13A:NM_001265580:exon9:c.G1047A:p.P349P,FAM13A:NM_001265578:exon10:c.G1089A:p.P363P,FAM13A:NM_001015045:exon11:c.G1131A:p.P377P,FAM13A:NM_001265579:exon11:c.G1131A:p.P377P,FAM13A:NM_014883:exon17:c.G2109A:p.P703P	exonic	ENSG00000138640	NA	synonymous SNV	ENSG00000138640:ENST00000513837:exon9:c.G1047A:p.P349P,ENSG00000138640:ENST00000503556:exon10:c.G1089A:p.P363P,ENSG00000138640:ENST00000395002:exon11:c.G1131A:p.P377P,ENSG00000138640:ENST00000508369:exon11:c.G1131A:p.P377P,ENSG00000138640:ENST00000511976:exon11:c.G867A:p.P289P,ENSG00000138640:ENST00000264344:exon17:c.G2109A:p.P703P	NA	NA	4q22.1	NA	NA	NA	NA	rs3756050	0.47	0.47	0.487	0.533946	0.2793	0.5446	0.2896	0.8094	0.5859	0.29	0.56	0.28	0.79	0.3749	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.405329	NA	NA	0.278256	0.722197	NA	0.486	NA	4.7342106
1179	2	160604452	160604452	C	T	exonic	MARCH7	NA	synonymous SNV	MARCH7:NM_022826:exon5:c.C651T:p.D217D	exonic	ENSG00000136536	NA	synonymous SNV	ENSG00000136536:ENST00000409591:exon4:c.C537T:p.D179D,ENSG00000136536:ENST00000539065:exon4:c.C483T:p.D161D,ENSG00000136536:ENST00000259050:exon5:c.C651T:p.D217D,ENSG00000136536:ENST00000409175:exon7:c.C651T:p.D217D	NA	NA	2q24.2	NA	NA	NA	NA	rs11555185	0.27	0.27	0.235	0.220447	0.33	0.2698	0.4928	0.0287	0.1227	0.33	0.29	0.45	0.03	0.2872	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.145718	NA	NA	0.315698	0.069224	ID=COSM148965;OCCURENCE=1(stomach),1(large_intestine)	0.341	NA	4.7337686
1179	1	32164206	32164206	T	G	exonic	COL16A1	NA	synonymous SNV	COL16A1:NM_001856:exon5:c.A268C:p.R90R	exonic	ENSG00000084636	NA	synonymous SNV	ENSG00000084636:ENST00000271069:exon5:c.A268C:p.R90R,ENSG00000084636:ENST00000373668:exon5:c.A268C:p.R90R,ENSG00000084636:ENST00000373672:exon5:c.A268C:p.R90R	Score=452;Name=lod=92	NA	1p35.2	NA	NA	NA	NA	rs2228550	0.59	0.59	0.586	0.625799	0.6541	0.3472	0.6599	0.82	0.5971	0.65	0.3	0.61	0.82	0.6289	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.080767	2.080767	NA	0.650012	0.791455	NA	0.623	NA	4.7336546
1179	1	92000804	92000804	T	G	intergenic	CDC7,TGFBR3	dist=9483;dist=145096	NA	NA	ncRNA_exonic	ENSG00000241318	NA	NA	NA	Score=795;Name=lod=2267	NA	1p22.1	NA	NA	NA	NA	rs12759236	0.35	0.35	0.345	0.33746	0.2664	0.4851	0.2839	0.2995	0.3476	0.27	0.49	0.35	0.33	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.095936	NA	NA	NA	NA	NA	0.333	NA	4.7336
1179	1	201079235	201079235	C	T	intronic	CACNA1S	NA	NA	NA	intronic	ENSG00000081248	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs1325310	0.39	0.39	0.383	0.403754	0.2664	0.6399	0.4179	0.3056	0.4243	0.27	0.63	0.38	0.31	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.151166	NA	NA	NA	NA	NA	0.268	CLINSIG=other;CLNDBN=Thyrotoxic_periodic_paralysis;CLNREVSTAT=single;CLNACC=RCV000019195.1;CLNDSDB=MedGen:OMIM:Orphanet:SNOMED_CT;CLNDSDBID=C0268446:188580:ORPHA79102:30967002	4.7336
1179	14	88983670	88983670	G	A	intronic	PTPN21	NA	NA	NA	intronic	ENSG00000070778	NA	NA	NA	NA	NA	14q31.3	NA	NA	Name=10	NA	rs10150986	0.37	0.37	0.391	0.384984	0.2664	0.3948	0.2594	0.5514	0.3609	0.28	0.37	0.27	0.59	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.43515	NA	NA	NA	NA	NA	0.486	NA	4.7336
1179	15	41810439	41810439	G	C	intronic	RPAP1	NA	NA	NA	UTR3	ENSG00000103932	ENST00000562303:c.*890C>G	NA	NA	NA	NA	15q15.1	NA	Name=FOXA2_(SC-6554),FOXA1_(SC-101058),HNF4A,SP1,HNF4A_(H-171),FOXA1_(C-20)	NA	NA	rs932959	0.32	0.32	0.307	0.299321	0.4334	0.2768	0.3285	0.1248	0.3998	0.43	0.31	0.33	0.13	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.484469	NA	NA	NA	NA	NA	0.29	NA	4.7332667
1179	2	61175312	61175312	T	C	exonic	PUS10	NA	synonymous SNV	PUS10:NM_144709:exon16:c.A1317G:p.K439K	exonic	ENSG00000162927	NA	synonymous SNV	ENSG00000162927:ENST00000316752:exon16:c.A1317G:p.K439K,ENSG00000162927:ENST00000407787:exon16:c.A1317G:p.K439K	Score=420;Name=lod=68	NA	2p16.1	NA	NA	NA	NA	rs12479056	0.51	0.51	0.503	0.455471	0.6889	0.1687	0.5274	0.5696	0.3057	0.67	0.19	0.6	0.57	0.568	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.842092	NA	NA	0.67686	0.606673	NA	0.572	NA	4.7329066
1179	14	107170077	107170077	C	T	intergenic	LINC00221,NONE	dist=218548;dist=NONE	NA	NA	exonic	ENSG00000211973	NA	nonsynonymous SNV	ENSG00000211973:ENST00000390633:exon2:c.G205A:p.G69R	NA	NA	14q32.33	NA	NA	Name=5	NA	rs11845244	0.39	0.39	0.346	0.419928	0.3628	0.4752	0.4078	0.3162	0.5706	0.35	0.45	0.42	0.34	0.4012	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.480368	NA	0.24	0.336589	0.230247	NA	0.377	NA	4.7327444
1179	1	209824099	209824099	G	C	intronic	LAMB3	NA	NA	NA	intronic	ENSG00000196878	NA	NA	NA	NA	NA	1q32.2	NA	NA	Name=47	NA	rs2076360	0.29	0.29	0.278	0.305911	0.2674	0.3383	0.4092	0.2383	0.3303	0.26	0.32	0.35	0.24	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.666099	NA	NA	NA	NA	NA	0.261	NA	4.7326
1179	2	14139272	14139272	T	C	intergenic	LOC100506474,FAM84A	dist=992134;dist=633538	NA	NA	ncRNA_intronic	ENSG00000230448	NA	NA	NA	Score=444;Name=lod=85	NA	2p24.3	NA	NA	NA	NA	rs34740797	0.16	0.16	0.147	0.161142	0.2674	0.0308	0.196	0.0454	0.318	0.27	0.04	0.24	0.06	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.141916	NA	NA	NA	NA	NA	0.203	NA	4.7326
1179	6	158662950	158662950	A	C	intergenic	GTF2H5,TULP4	dist=42574;dist=70742	NA	NA	ncRNA_exonic	ENSG00000188451	NA	NA	NA	Score=652;Name=lod=598	NA	6q25.3	NA	NA	NA	NA	rs9459762	0.14	0.14	0.122	0.105631	0.2674	0.0119	0.121	0.0567	0.091	0.27	0.01	0.15	0.08	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.81953	NA	NA	NA	NA	NA	0.145	NA	4.7326
1179	6	158663019	158663019	A	G	intergenic	GTF2H5,TULP4	dist=42643;dist=70673	NA	NA	ncRNA_exonic	ENSG00000188451	NA	NA	NA	Score=652;Name=lod=598	NA	6q25.3	NA	NA	NA	NA	rs9459763	0.14	0.14	0.127	0.105631	0.2674	0.0119	0.121	0.0567	0.091	0.27	0.01	0.15	0.08	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.338795	NA	NA	NA	NA	NA	0.145	NA	4.7326
1179	22	38503847	38503847	C	T	intronic	BAIAP2L2	NA	NA	NA	intronic	ENSG00000128298	NA	NA	NA	NA	NA	22q13.1	Score=888;Name=V$AP2_Q6	Name=TCF4	Name=22	NA	rs6001006	0.78	0.78	0.794	0.822284	0.7376	0.6974	0.8545	0.9198	0.8834	0.74	0.66	0.86	0.91	0.7804	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.355315	NA	NA	0.749821	0.886899	NA	0.833	NA	4.732179
1179	20	18393275	18393275	C	T	intronic	DZANK1	NA	NA	NA	intronic	ENSG00000089091	NA	NA	NA	NA	NA	20p11.23	NA	Name=Pol2	Name=7	NA	rs59695827	0.28	0.28	0.266	0.289936	0.4483	0.122	0.2867	0.2163	0.4018	0.44	0.13	0.31	0.17	0.3768	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.263264	NA	NA	0.442944	0.243747	NA	0.428	NA	4.731956
1179	8	6335208	6335208	T	C	intronic	MCPH1	NA	NA	NA	intronic	ENSG00000147316	NA	NA	NA	NA	NA	8p23.1	NA	NA	Name=69	NA	rs2277136	0.14	0.14	0.148	0.152556	0.1402	0.1825	0.1052	0.1399	0.1851	0.13	0.18	0.1	0.14	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.527681	NA	NA	0.127987	0.11922	NA	0.203	NA	4.731813
1179	1	26497340	26497340	A	C	UTR3	ZNF593	NM_015871:c.*133A>C	NA	NA	ncRNA_UTR3	ENSG00000142684	NA	NA	NA	NA	NA	1p36.11	NA	NA	Name=2	NA	rs8768	0.83	0.83	0.817	0.840855	0.7684	0.9712	0.8559	0.7549	0.8865	0.76	0.98	0.83	0.77	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.112294	2.112294	NA	NA	NA	NA	0.848	NA	4.7316
1179	14	66480247	66480247	C	T	intergenic	FUT8,LINC00238	dist=269408;dist=472862	NA	NA	ncRNA_exonic	ENSG00000224861	NA	NA	NA	Score=840;Name=lod=3458	NA	14q23.3	NA	NA	NA	NA	rs1807442	NA	NA	NA	0.328275	0.2684	0.1756	0.3127	0.6074	0.181	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.826638	1.826638	NA	NA	NA	NA	NA	NA	4.7316
1179	14	66480248	66480248	A	C	intergenic	FUT8,LINC00238	dist=269409;dist=472861	NA	NA	ncRNA_exonic	ENSG00000224861	NA	NA	NA	Score=840;Name=lod=3458	NA	14q23.3	NA	NA	NA	NA	rs1807441	NA	NA	NA	0.329273	0.2684	0.1756	0.3127	0.6112	0.181	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.993955	1.993955	NA	NA	NA	ID=COSM147797;OCCURENCE=1(stomach)	NA	NA	4.7316
1179	17	61763031	61763031	G	C	intronic	MAP3K3	NA	NA	NA	intronic	ENSG00000198909	NA	NA	NA	NA	Name=Height	17q23.3	NA	NA	NA	NA	rs11658329	0.32	0.32	0.342	0.335863	0.2684	0.0496	0.2378	0.7943	0.1503	0.26	0.05	0.24	0.78	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.154646	NA	NA	NA	NA	NA	0.319	NA	4.7316
1179	1	146554147	146554147	C	T	intergenic	LOC728989,PRKAB2	dist=39548;dist=72538	NA	NA	ncRNA_exonic	ENSG00000230832	NA	NA	NA	Score=632;Name=lod=493	NA	1q21.1	NA	NA	NA	NA	rs12129691	0.16	0.16	0.158	0.1252	0.2694	0.0268	0.1354	0.118	0.0808	0.28	0.02	0.17	0.11	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.768175	NA	NA	NA	NA	NA	0.174	NA	4.7306
1179	1	156280671	156280671	A	T	intronic	CCT3	NA	NA	NA	intronic	ENSG00000163468	NA	NA	NA	NA	NA	1q22	NA	Name=GATA-2	NA	NA	rs10908500	0.21	0.21	0.187	0.20627	0.2694	0.2262	0.2795	0.0923	0.2229	0.27	0.23	0.23	0.09	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.855265	NA	NA	NA	NA	NA	0.217	NA	4.7306
1179	6	70894894	70894894	C	A	intronic	COL19A1	NA	NA	NA	intronic	ENSG00000082293	NA	NA	NA	NA	NA	6q13	Score=844;Name=V$TST1_01	NA	NA	NA	rs2296006	0.21	0.21	0.191	0.197284	0.2694	0.1875	0.1354	0.1467	0.2454	0.27	0.21	0.15	0.15	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.364936	NA	NA	NA	NA	NA	0.123	NA	4.7306
1179	6	75827028	75827028	T	C	intronic	COL12A1	NA	NA	NA	intronic	ENSG00000111799	NA	NA	NA	NA	NA	6q13	NA	NA	Name=43	NA	rs17186509	0.12	0.12	0.121	0.104034	0.2694	0.0347	0.1513	0.0151	0.092	0.26	0.03	0.15	0.01	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.242124	NA	NA	NA	NA	ID=COSN167832;OCCURENCE=1(large_intestine)	0.094	NA	4.7306
1179	7	38695584	38695584	A	G	intergenic	AMPH,FAM183B	dist=24417;dist=29362	NA	NA	ncRNA_exonic	ENSG00000227404	NA	NA	NA	Score=731;Name=lod=1245	NA	7p14.1	NA	NA	NA	NA	rs10226586	0.25	0.25	0.203	0.245008	0.2694	0.3155	0.3141	0.0983	0.2965	0.27	0.3	0.31	0.11	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.08474	NA	NA	NA	NA	NA	0.341	NA	4.7306
1179	10	115481018	115481018	C	T	intronic	CASP7	NA	NA	NA	intronic	ENSG00000165806	NA	NA	NA	NA	Name=Vitiligo	10q25.3	NA	NA	NA	NA	rs3814231	0.27	0.27	0.266	0.261182	0.2694	0.4127	0.2608	0.1256	0.2802	0.25	0.42	0.28	0.13	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.129772	NA	NA	NA	NA	NA	0.217	NA	4.7306
1179	11	118888831	118888831	T	C	intronic	RPS25	NA	NA	NA	intronic	ENSG00000118181	NA	NA	NA	NA	NA	11q23.3	NA	Name=c-Myc,Egr-1,CTCF_(SC-5916),p300,Max,Pol2	NA	NA	rs11820805	0.27	0.27	0.263	0.327875	0.2694	0.128	0.2579	0.5159	0.3896	0.26	0.1	0.27	0.5	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.143494	NA	NA	NA	NA	NA	0.384	NA	4.7306
1179	14	52754921	52754921	G	A	intergenic	PTGDR,PTGER2	dist=11479;dist=26095	NA	NA	ncRNA_exonic	ENSG00000261208	NA	NA	NA	Score=576;Name=lod=291	NA	14q22.1	NA	NA	NA	NA	rs17831700	0.25	0.25	0.232	0.230831	0.2694	0.1617	0.2896	0.2247	0.229	0.27	0.16	0.32	0.27	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.057573	NA	NA	NA	NA	ID=COSN164672;OCCURENCE=1(NS)	0.232	NA	4.7306
1179	19	15763577	15763577	A	C	intronic	CYP4F3	NA	NA	NA	intronic	ENSG00000186529	NA	NA	NA	NA	NA	19p13.12	NA	Name=NRSF	NA	NA	rs2733750	0.2	0.2	0.188	0.196086	0.2694	0.1558	0.1671	0.1067	0.3037	0.27	0.18	0.2	0.12	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.389999	NA	NA	NA	NA	NA	0.203	NA	4.7306
1179	17	62385918	62385918	C	A	intergenic	TEX2,PECAM1	dist=45265;dist=10859	NA	NA	ncRNA_exonic	ENSG00000256358	NA	NA	NA	Score=674;Name=lod=728	NA	17q23.3	NA	NA	NA	NA	rs71377736	0.05	0.05	0.038	0.0335463	0.0875	NA	0.0432	0.0091	0.0389	0.1	NA	0.06	0.02	0.0765	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.511707	NA	NA	0.105477	0.020991	NA	0.022	NA	4.730523
1179	14	91636395	91636395	C	T	exonic	C14orf159	NA	synonymous SNV	C14orf159:NM_001102368:exon5:c.C306T:p.G102G,C14orf159:NM_024952:exon5:c.C306T:p.G102G,C14orf159:NM_001102367:exon6:c.C306T:p.G102G,C14orf159:NM_001102366:exon7:c.C306T:p.G102G,C14orf159:NM_001102369:exon7:c.C306T:p.G102G	exonic	ENSG00000133943	NA	synonymous SNV	ENSG00000133943:ENST00000522170:exon4:c.C306T:p.G102G,ENSG00000133943:ENST00000256324:exon5:c.C306T:p.G102G,ENSG00000133943:ENST00000428926:exon5:c.C306T:p.G102G,ENSG00000133943:ENST00000518871:exon5:c.C306T:p.G102G,ENSG00000133943:ENST00000521064:exon5:c.C306T:p.G102G,ENSG00000133943:ENST00000521334:exon5:c.C306T:p.G102G,ENSG00000133943:ENST00000523771:exon5:c.C306T:p.G102G,ENSG00000133943:ENST00000523894:exon5:c.C306T:p.G102G,ENSG00000133943:ENST00000412671:exon6:c.C306T:p.G102G,ENSG00000133943:ENST00000517518:exon6:c.C306T:p.G102G,ENSG00000133943:ENST00000522322:exon6:c.C306T:p.G102G,ENSG00000133943:ENST00000519950:exon7:c.C306T:p.G102G,ENSG00000133943:ENST00000520328:exon7:c.C306T:p.G102G,ENSG00000133943:ENST00000521077:exon7:c.C306T:p.G102G,ENSG00000133943:ENST00000523816:exon7:c.C306T:p.G102G,ENSG00000133943:ENST00000518868:exon8:c.C306T:p.G102G	NA	NA	14q32.11	NA	NA	NA	NA	rs4900071	0.19	0.19	0.167	0.167133	0.3241	0.0585	0.2262	0.1036	0.1616	0.33	0.06	0.24	0.1	0.2756	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.220899	NA	NA	0.33686	0.161371	ID=COSM433470;OCCURENCE=1(breast)	0.29	NA	4.7301066
1179	14	22636774	22636774	A	T	intergenic	OR4E2,DAD1	dist=502536;dist=397033	NA	NA	exonic	ENSG00000259092	NA	nonsynonymous SNV	ENSG00000259092:ENST00000557168:exon2:c.A227T:p.K76M	NA	NA	14q11.2	NA	NA	NA	NA	rs34504645	0.06	0.06	0.063	0.0567093	0.0408	NA	0.0331	0.1452	0.0286	0.03	NA	0.04	0.17	0.033	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.461018	2.461018	0.03	0.02992	0.107162	NA	NA	NA	4.7296134
1179	1	189958874	189958874	T	C	intergenic	NONE,FAM5C	dist=NONE;dist=107923	NA	NA	ncRNA_exonic	ENSG00000230987	NA	NA	NA	Score=717;Name=lod=1097	NA	1q31.1	NA	NA	NA	NA	rs1730734	0.22	0.22	0.203	0.219649	0.2704	0.1835	0.1931	0.2088	0.2382	0.26	0.2	0.22	0.17	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.127707	NA	NA	NA	NA	NA	0.268	NA	4.7296
1179	1	189959106	189959106	G	T	intergenic	NONE,FAM5C	dist=NONE;dist=107691	NA	NA	ncRNA_exonic	ENSG00000230987	NA	NA	NA	Score=717;Name=lod=1097	NA	1q31.1	NA	NA	NA	NA	rs1711762	0.22	0.22	0.209	0.219449	0.2704	0.1825	0.1931	0.2088	0.2382	0.26	0.19	0.22	0.17	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.708453	NA	NA	NA	NA	NA	0.268	NA	4.7296
1179	5	180710261	180710261	T	C	intergenic	TRIM52,LOC100133331	dist=22142;dist=40246	NA	NA	ncRNA_intronic	ENSG00000248103	NA	NA	NA	NA	NA	5q35.3	NA	Name=CTCF	NA	NA	rs2545073	0.32	0.32	0.31	0.377396	0.2704	0.3472	0.2579	0.562	0.3538	0.25	0.27	0.24	0.52	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.5023	NA	NA	NA	NA	NA	0.036	NA	4.7296
1179	12	124209332	124209332	T	C	exonic	ATP6V0A2	NA	synonymous SNV	ATP6V0A2:NM_012463:exon4:c.T426C:p.N142N	exonic	ENSG00000185344	NA	synonymous SNV	ENSG00000185344:ENST00000504192:exon1:c.T36C:p.N12N,ENSG00000185344:ENST00000330342:exon4:c.T426C:p.N142N	NA	NA	12q24.31	NA	NA	NA	NA	rs1139789	0.74	0.74	0.728	0.750998	0.6282	0.9474	0.7723	0.7027	0.7249	0.63	0.95	0.74	0.67	0.6792	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.121134	NA	NA	0.629767	0.679528	NA	0.739	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000081551.1;CLNDSDB=.;CLNDSDBID=.	4.7294996
1179	6	137540370	137540370	A	G	intronic	IFNGR1	NA	NA	NA	intronic	ENSG00000027697	NA	NA	NA	NA	NA	6q23.3	NA	Name=POU2F2,Pol2-4H8,Sin3Ak-20,Pol2,Oct-2,HEY1,CHD2_(N-1250),TBP	Name=12	NA	rs7749390	0.45	0.45	0.447	0.502396	0.3917	0.5873	0.3617	0.5015	0.6299	0.39	0.52	0.37	0.49	0.4834	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.82657	1.82657	NA	0.395533	0.492045	NA	0.341	NA	4.729367
1179	6	170627651	170627651	G	A	exonic	FAM120B	NA	synonymous SNV	FAM120B:NM_032448:exon2:c.G1173A:p.T391T	exonic	ENSG00000112584	NA	synonymous SNV	ENSG00000112584:ENST00000366751:exon2:c.G1173A:p.T391T,ENSG00000112584:ENST00000476287:exon2:c.G1173A:p.T391T,ENSG00000112584:ENST00000537664:exon2:c.G1242A:p.T414T,ENSG00000112584:ENST00000540480:exon2:c.G1209A:p.T403T	NA	NA	6q27	NA	Name=EBF	NA	NA	rs9460113	0.48	0.48	0.461	0.499201	0.671	0.124	0.5951	0.5749	0.5389	0.66	0.1	0.59	0.56	0.5996	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.57937	1.57937	NA	0.666977	0.572855	NA	0.536	NA	4.7290896
1179	22	32435511	32435511	G	A	intergenic	YWHAH,SLC5A1	dist=81921;dist=3508	NA	NA	ncRNA_exonic	ENSG00000232346	NA	NA	NA	Score=752;Name=lod=1516	NA	22q12.3	NA	NA	NA	NA	rs7285301	0.1	0.1	0.103	0.115216	0.0835	0.0685	0.0692	0.2073	0.1043	0.08	0.06	0.08	0.2	0.092	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.009424	NA	NA	0.095581	0.199728	NA	0.145	NA	4.728919
1179	1	81967962	81967962	T	C	intergenic	NONE,LPHN2	dist=NONE;dist=298120	NA	NA	ncRNA_exonic	ENSG00000227288	NA	NA	NA	Score=691;Name=lod=861	NA	1p31.1	NA	NA	NA	NA	rs1044343	0.42	0.42	0.42	0.516573	0.2714	0.5595	0.4207	0.764	0.4581	0.23	0.49	0.38	0.66	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.407576	NA	NA	NA	NA	NA	0.507	NA	4.7286
1179	1	81967987	81967987	T	C	intergenic	NONE,LPHN2	dist=NONE;dist=298095	NA	NA	ncRNA_exonic	ENSG00000227288	NA	NA	NA	Score=691;Name=lod=861	NA	1p31.1	NA	NA	NA	NA	rs1324376	0.46	0.46	0.359	0.511981	0.2714	0.5605	0.4164	0.7481	0.4581	0.26	0.53	0.4	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.442602	NA	NA	NA	NA	NA	0.493	NA	4.7286
1179	7	145280663	145280663	G	T	intergenic	TPK1,CNTNAP2	dist=747517;dist=532790	NA	NA	ncRNA_exonic	ENSG00000231839	NA	NA	NA	Score=593;Name=lod=344	NA	7q35	NA	NA	NA	NA	rs17169763	0.29	0.29	0.279	0.283147	0.2714	0.4236	0.3026	0.1082	0.3732	0.27	0.46	0.31	0.11	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.075466	NA	NA	NA	NA	NA	0.297	NA	4.7286
1179	15	84722521	84722521	A	G	intergenic	ADAMTSL3,EFTUD1P1	dist=13928;dist=26418	NA	NA	ncRNA_exonic	ENSG00000259609	NA	NA	NA	Score=446;Name=lod=87	NA	15q25.2	NA	NA	NA	NA	rs1818950	0.15	0.15	0.13	0.132388	0.2714	0.0546	0.1801	0.0121	0.1984	0.28	0.06	0.2	0.02	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.019363	NA	NA	NA	NA	NA	0.13	NA	4.7286
1179	17	49579945	49579945	T	C	intergenic	UTP18,CA10	dist=204653;dist=127729	NA	NA	ncRNA_exonic	ENSG00000187504	NA	NA	NA	Score=762;Name=lod=1669	NA	17q21.33	NA	NA	NA	NA	rs4527063	0.38	0.38	0.375	0.459864	0.2714	0.2728	0.379	0.7602	0.498	0.27	0.27	0.35	0.69	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.19018	NA	NA	NA	NA	NA	0.413	NA	4.7286
1179	21	37626011	37626011	C	T	intronic	DOPEY2	NA	NA	NA	intronic	ENSG00000142197	NA	NA	NA	NA	NA	21q22.12	NA	NA	Name=5	NA	rs62232368	0.17	0.17	0.171	0.161142	0.2714	0.0367	0.3026	0.1596	0.0777	0.26	0.03	0.3	0.13	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.728086	NA	NA	NA	NA	NA	0.152	NA	4.7286
1179	14	107113851	107113851	C	T	intergenic	LINC00221,NONE	dist=162322;dist=NONE	NA	NA	exonic	ENSG00000223648	NA	nonsynonymous SNV	ENSG00000223648:ENST00000454421:exon2:c.G244A:p.D82N	NA	NA	14q32.33	NA	Name=CTCF	NA	NA	rs2072045	0.49	0.49	0.474	0.573882	0.3857	0.5337	0.4524	0.7194	0.6984	0.36	0.47	0.46	0.73	0.3923	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.579628	NA	0.01	0.326982	0.575931	NA	0.464	NA	4.7283514
1179	11	102678441	102678441	G	A	ncRNA_intronic	WTAPP1	NA	NA	NA	ncRNA_exonic	ENSG00000256035	NA	NA	NA	Score=753;Name=lod=1535	NA	11q22.2	NA	NA	NA	NA	rs504875	0.94	0.94	0.94	0.948083	0.9384	0.9276	0.9597	0.9781	0.9305	0.93	0.91	0.96	0.98	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.106549	NA	NA	NA	NA	NA	0.986	NA	4.7282666
1179	15	76462286	76462286	A	G	intronic	C15orf27	NA	NA	NA	intronic	ENSG00000169758	NA	NA	NA	NA	NA	15q24.2	NA	NA	Name=30	NA	rs12902022	0.14	0.14	0.104	0.116613	0.1471	0.1657	0.2867	0.0068	0.0624	0.14	0.17	0.24	0.01	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.020544	NA	NA	0.124921	0.024781	NA	0.232	NA	4.727979
1179	5	31823077	31823077	C	T	intronic	PDZD2	NA	NA	NA	ncRNA_exonic	ENSG00000224282	NA	NA	NA	Score=669;Name=lod=696	NA	5p13.3	NA	NA	NA	NA	rs6888789	0.51	0.51	0.479	0.485823	0.6054	0.2728	0.6095	0.5401	0.4213	0.6	0.31	0.64	0.51	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.003027	NA	NA	NA	NA	NA	0.529	NA	4.7279333
1179	5	31823213	31823213	T	C	intronic	PDZD2	NA	NA	NA	ncRNA_exonic	ENSG00000224282	NA	NA	NA	Score=582;Name=lod=308	NA	5p13.3	NA	NA	NA	NA	rs6870166	0.52	0.52	0.508	0.502396	0.6054	0.2728	0.6182	0.5983	0.4213	0.6	0.31	0.65	0.56	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.194247	NA	NA	NA	NA	NA	0.529	NA	4.7279333
1179	15	89679515	89679515	G	A	intronic	ABHD2	NA	NA	NA	ncRNA_exonic	ENSG00000259699	NA	NA	NA	Score=670;Name=lod=706	NA	15q26.1	NA	NA	NA	NA	rs12443471	0.54	0.54	0.535	0.520966	0.6054	0.3958	0.6239	0.5219	0.4888	0.62	0.41	0.65	0.5	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.545081	NA	NA	NA	NA	NA	0.435	NA	4.7279333
1179	19	48737764	48737764	A	G	exonic	CARD8	NA	synonymous SNV	CARD8:NM_001184900:exon3:c.T246C:p.L82L,CARD8:NM_001184901:exon3:c.T96C:p.L32L,CARD8:NM_001184903:exon4:c.T246C:p.L82L,CARD8:NM_014959:exon4:c.T96C:p.L32L,CARD8:NM_001184902:exon6:c.T246C:p.L82L	exonic	ENSG00000105483	NA	synonymous SNV	ENSG00000105483:ENST00000391898:exon3:c.T246C:p.L82L,ENSG00000105483:ENST00000447740:exon3:c.T96C:p.L32L,ENSG00000105483:ENST00000518622:exon3:c.T96C:p.L32L,ENSG00000105483:ENST00000518979:exon3:c.T96C:p.L32L,ENSG00000105483:ENST00000519302:exon3:c.T96C:p.L32L,ENSG00000105483:ENST00000521415:exon3:c.T246C:p.L82L,ENSG00000105483:ENST00000517510:exon4:c.T96C:p.L32L,ENSG00000105483:ENST00000519646:exon4:c.T246C:p.L82L,ENSG00000105483:ENST00000520015:exon4:c.T246C:p.L82L,ENSG00000105483:ENST00000520153:exon4:c.T96C:p.L32L,ENSG00000105483:ENST00000521613:exon4:c.T96C:p.L32L,ENSG00000105483:ENST00000522773:exon5:c.T246C:p.L82L,ENSG00000105483:ENST00000519940:exon6:c.T246C:p.L82L,ENSG00000105483:ENST00000520753:exon6:c.T246C:p.L82L,ENSG00000105483:ENST00000522889:exon6:c.T96C:p.L32L	NA	NA	19q13.33	NA	NA	NA	NA	rs2288876	0.24	0.24	0.213	0.269369	0.2932	0.1944	0.3674	0.1959	0.3517	0.29	0.18	0.33	0.18	0.3178	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.517159	NA	NA	0.327791	0.216296	NA	0.167	NA	4.7278756
1179	3	148879883	148879883	A	G	intronic	HPS3	NA	NA	NA	intronic	ENSG00000163755	NA	NA	NA	NA	NA	3q24	NA	Name=GR	NA	NA	rs57943258	0.16	0.16	0.172	0.165335	0.1392	0.0893	0.1081	0.3306	0.0879	0.13	0.1	0.12	0.31	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.673588	NA	NA	0.133099	0.274543	NA	0.159	NA	4.727701
1179	3	132106634	132106634	G	A	intergenic	ACPP,DNAJC13	dist=19488;dist=29919	NA	NA	ncRNA_exonic	ENSG00000240890	NA	NA	NA	Score=569;Name=lod=273	NA	3q22.1	NA	NA	NA	NA	rs10935006	0.25	0.25	0.23	0.240415	0.2724	0.2867	0.2867	0.1263	0.2812	0.28	0.27	0.26	0.16	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.441111	2.441111	NA	NA	NA	NA	0.355	NA	4.7276
1179	15	79080798	79080798	C	T	intronic	ADAMTS7	NA	NA	NA	intronic	ENSG00000136378	NA	NA	NA	NA	NA	15q25.1	NA	Name=CTCF	NA	NA	rs3743058	0.3	0.3	0.286	0.329872	0.2724	0.3343	0.3329	0.3177	0.3988	0.27	0.32	0.34	0.28	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.166945	NA	NA	NA	NA	NA	0.275	NA	4.7276
1179	4	140809710	140809710	C	G	intronic	MAML3	NA	NA	NA	intronic	ENSG00000196782	NA	NA	NA	NA	NA	4q31.1	NA	Name=p300	Name=40	NA	rs3775241	0.32	0.32	0.313	0.300519	0.4433	0.127	0.3156	0.3366	0.273	0.46	0.14	0.35	0.31	0.3856	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.023863	NA	NA	0.443747	0.32363	NA	0.275	NA	4.727353
1179	16	1894912	1894912	C	T	exonic	MEIOB	NA	synonymous SNV	MEIOB:NM_001163560:exon10:c.G831A:p.T277T,MEIOB:NM_152764:exon10:c.G831A:p.T277T	exonic	ENSG00000162039	NA	synonymous SNV	ENSG00000162039:ENST00000325962:exon9:c.G831A:p.T277T,ENSG00000162039:ENST00000470044:exon9:c.G210A:p.T70T,ENSG00000162039:ENST00000397344:exon10:c.G831A:p.T277T,ENSG00000162039:ENST00000412554:exon10:c.G831A:p.T277T,ENSG00000162039:ENST00000452149:exon10:c.G831A:p.T277T	NA	NA	16p13.3	NA	NA	NA	NA	rs9806826	0.35	0.35	0.362	0.370208	0.3141	0.4246	0.3242	0.3548	0.4254	0.31	0.44	0.29	0.36	0.3382	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.068542	NA	NA	0.287065	0.334321	NA	0.377	NA	4.7273016
1179	6	31192509	31192509	C	T	intergenic	HCG27,HLA-C	dist=20764;dist=44017	NA	NA	ncRNA_exonic	ENSG00000255899	NA	NA	NA	Score=643;Name=lod=549	NA	6p21.33	NA	NA	NA	NA	rs9263991	0.23	0.23	0.202	0.258986	0.2734	0.1577	0.2853	0.3154	0.2536	0.26	0.12	0.29	0.27	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.73268	NA	NA	NA	NA	NA	0.152	NA	4.7266
1179	7	45144403	45144403	C	T	intronic	TBRG4	NA	NA	NA	intronic	ENSG00000136270	NA	NA	NA	Score=455;Name=lod=94	NA	7p13	NA	NA	NA	NA	rs2289375	0.34	0.34	0.388	0.391174	0.2734	0.1905	0.2637	0.6619	0.4438	0.27	0.17	0.3	0.68	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.044351	4.044351	NA	NA	NA	NA	0.435	NA	4.7266
1179	17	79225851	79225851	G	A	intronic	SLC38A10	NA	NA	NA	intronic	ENSG00000157637	NA	NA	NA	NA	NA	17q25.3	NA	NA	Name=11	NA	rs9915417	0.23	0.23	0.217	0.215455	0.2734	0.004	0.2435	0.4274	0.0675	0.27	0.0035	0.25	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.74313	3.74313	NA	NA	NA	NA	0.254	NA	4.7266
1179	9	79827964	79827964	G	C	intronic	VPS13A	NA	NA	NA	intronic	ENSG00000197969	NA	NA	NA	NA	NA	9q21.2	NA	Name=FOXA2_(SC-6554),FOXA1_(SC-101058),FOXA1_(C-20)	NA	NA	rs17723908	0.08	0.08	0.073	0.0704872	0.0954	0.1071	0.0576	0.0356	0.0634	0.1	0.11	0.05	0.05	0.0871	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.851171	NA	NA	0.091047	0.057649	NA	0.051	NA	4.726453
1179	6	132149254	132149254	C	A	intronic	ENPP1	NA	NA	NA	ncRNA_exonic	ENSG00000237115	NA	NA	NA	Score=658;Name=lod=628	NA	6q23.2	NA	NA	NA	NA	rs2021315	0.71	0.71	0.735	0.748203	0.6074	0.8105	0.6628	0.8744	0.7188	0.58	0.8	0.68	0.85	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.57235	NA	NA	NA	NA	NA	0.71	NA	4.7259333
1179	11	48328644	48328644	C	T	exonic	OR4S1	NA	synonymous SNV	OR4S1:NM_001004725:exon1:c.C870T:p.N290N	exonic	ENSG00000176555	NA	synonymous SNV	ENSG00000176555:ENST00000319988:exon1:c.C870T:p.N290N	NA	NA	11p11.2	NA	NA	NA	NA	rs753095	0.37	0.37	0.408	0.43131	0.3042	0.4544	0.2911	0.5113	0.5297	0.29	0.4	0.3	0.51	0.338	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.875995	NA	NA	0.298627	0.48796	NA	0.471	NA	4.7258396
1179	11	7805415	7805415	C	T	intergenic	OVCH2,OR5P2	dist=77474;dist=12106	NA	NA	ncRNA_exonic	ENSG00000241008	NA	NA	NA	Score=784;Name=lod=2047	NA	11p15.4	NA	NA	NA	NA	rs7933360	0.25	0.25	0.241	0.20607	0.2744	0.1151	0.2795	0.2579	0.1074	0.29	0.13	0.27	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.473344	NA	NA	NA	NA	NA	0.239	NA	4.7256
1179	7	150557622	150557622	G	A	exonic	ABP1	NA	synonymous SNV	ABP1:NM_001091:exon4:c.G1890A:p.S630S,ABP1:NM_001272072:exon4:c.G1947A:p.S649S	exonic	ENSG00000002726	NA	synonymous SNV	ENSG00000002726:ENST00000360937:exon4:c.G1890A:p.S630S,ENSG00000002726:ENST00000416793:exon4:c.G1947A:p.S649S,ENSG00000002726:ENST00000467291:exon6:c.G1890A:p.S630S,ENSG00000002726:ENST00000493429:exon6:c.G1890A:p.S630S	NA	NA	7q36.1	NA	NA	NA	NA	rs12179	0.42	0.42	0.427	0.453275	0.2694	0.4802	0.3977	0.5446	0.5307	0.29	0.51	0.41	0.54	0.37	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.085267	NA	NA	0.301818	0.474017	ID=COSM150422;OCCURENCE=1(stomach)	0.486	NA	4.7254486
1179	12	107395106	107395106	A	G	exonic	CRY1	NA	synonymous SNV	CRY1:NM_004075:exon5:c.T636C:p.G212G	exonic	ENSG00000008405	NA	synonymous SNV	ENSG00000008405:ENST00000008527:exon5:c.T636C:p.G212G	NA	NA	12q23.3	Score=813;Name=V$ISRE_01	NA	NA	NA	rs8192440	0.79	0.79	0.799	0.789736	0.6282	0.9554	0.7579	0.857	0.7168	0.63	0.96	0.75	0.85	0.689	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.269098	1.269098	NA	0.62407	0.821153	NA	0.768	NA	4.7253966
1179	4	99993869	99993869	G	T	intronic	ADH5	NA	NA	NA	intronic	ENSG00000197894	NA	NA	NA	Score=623;Name=lod=452	NA	4q23	NA	NA	NA	NA	rs17595424	0.06	0.06	0.072	0.0545128	0.0974	NA	0.072	0.0703	0.0327	0.09	NA	0.08	0.08	0.075	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.387026	1.387026	NA	0.102345	0.081882	NA	0.051	NA	4.725255
1180	1	228547901	228547901	C	T	exonic	OBSCN	NA	synonymous SNV	OBSCN:NM_052843:exon81:c.C19308T:p.D6436D	exonic	ENSG00000154358	NA	synonymous SNV	ENSG00000154358:ENST00000284548:exon81:c.C19308T:p.D6436D,ENSG00000154358:ENST00000366709:exon81:c.C10665T:p.D3555D	NA	NA	1q42.13	NA	NA	NA	NA	rs12035900	0.27	0.27	0.279	0.298722	0.328	0.2669	0.3112	0.1142	0.5419	0.33	0.27	0.32	0.14	0.3126	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.952791	NA	NA	0.301143	0.159954	ID=COSM1473563;OCCURENCE=1(breast)	0.333	NA	4.7249236
1180	12	121690587	121690587	G	A	intronic	CAMKK2	NA	NA	NA	intronic	ENSG00000110931	NA	NA	NA	NA	NA	12q24.31	NA	Name=USF2,NF-YB	NA	NA	rs1560568	0.23	0.23	0.176	0.240815	0.1491	0.2778	0.2839	0.2799	0.2137	0.15	0.26	0.26	0.28	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.101676	NA	NA	0.126021	0.291185	NA	0.225	NA	4.724879
1180	1	167844553	167844553	C	A	intronic	ADCY10	NA	NA	NA	intronic	ENSG00000143199	NA	NA	NA	NA	NA	1q24.2	NA	NA	Name=23	NA	rs203826	0.32	0.32	0.32	0.315695	0.2753	0.1875	0.3444	0.5552	0.1452	0.27	0.2	0.31	0.52	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.084193	NA	NA	NA	NA	NA	0.348	NA	4.7247
1180	2	189092694	189092694	T	C	intergenic	TFPI,GULP1	dist=673475;dist=63702	NA	NA	ncRNA_exonic	ENSG00000213115,ENSG00000231689	NA	NA	NA	NA	NA	2q32.1	NA	Name=ELF1_(SC-631)	NA	NA	rs61998215	0.13	0.13	0.104	0.146765	0.2753	0.0397	0.1427	0.0166	0.3037	0.26	0.04	0.17	0.03	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.025493	NA	NA	NA	NA	NA	0.225	NA	4.7247
1180	10	67008048	67008048	G	T	intergenic	ANXA2P3,CTNNA3	dist=421414;dist=671677	NA	NA	ncRNA_exonic	ENSG00000233724	NA	NA	NA	Score=648;Name=lod=575	NA	10q21.3	NA	NA	NA	NA	rs17204569	0.17	0.17	0.152	0.132388	0.2753	0.0813	0.2046	0.0408	0.1104	0.28	0.09	0.2	0.07	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.682413	NA	NA	NA	NA	NA	0.21	NA	4.7247
1180	17	11532835	11532835	A	G	exonic	DNAH9	NA	synonymous SNV	DNAH9:NM_001372:exon7:c.A1452G:p.E484E	exonic	ENSG00000007174	NA	synonymous SNV	ENSG00000007174:ENST00000262442:exon7:c.A1452G:p.E484E,ENSG00000007174:ENST00000454412:exon7:c.A1452G:p.E484E	NA	NA	17p12	NA	NA	NA	NA	rs9895535	0.35	0.35	0.365	0.392772	0.3161	0.131	0.2334	0.7761	0.3364	0.3	0.12	0.26	0.77	0.3236	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.07042	NA	NA	0.30314	0.71153	NA	0.355	NA	4.7238266
1180	2	207101017	207101017	G	T	intergenic	GPR1,ZDBF2	dist=18246;dist=38506	NA	NA	ncRNA_exonic	ENSG00000159186	NA	NA	NA	Score=432;Name=lod=76	NA	2q33.3	NA	NA	NA	NA	rs726167	0.29	0.29	0.331	0.302516	0.2763	0.2292	0.1873	0.4047	0.3487	0.28	0.23	0.23	0.42	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.054492	NA	NA	NA	NA	NA	0.203	NA	4.7237
1180	4	137276414	137276414	G	A	intergenic	NONE,PCDH18	dist=NONE;dist=1163660	NA	NA	ncRNA_exonic	ENSG00000249311	NA	NA	NA	Score=563;Name=lod=258	NA	4q28.3	NA	NA	NA	NA	rs10011523	0.28	0.28	0.269	0.303714	0.2763	0.3552	0.3689	0.267	0.2822	0.26	0.35	0.3	0.22	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.178671	NA	NA	NA	NA	NA	0.304	NA	4.7237
1180	8	13600024	13600024	G	A	intergenic	C8orf48,SGCZ	dist=174227;dist=347349	NA	NA	ncRNA_exonic	ENSG00000255413	NA	NA	NA	Score=403;Name=lod=58	NA	8p22	NA	NA	NA	NA	rs1481898	0.27	0.27	0.253	0.247804	0.2763	0.3065	0.3098	0.1679	0.2219	0.28	0.32	0.27	0.18	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.378096	NA	NA	NA	NA	NA	0.333	NA	4.7237
1180	9	103494116	103494116	T	C	intergenic	MURC,LPPR1	dist=143943;dist=296915	NA	NA	ncRNA_exonic	ENSG00000237999	NA	NA	NA	Score=855;Name=lod=3978	NA	9q31.1	NA	NA	NA	NA	rs4742792	0.39	0.39	0.349	0.372404	0.2763	0.4742	0.5014	0.4002	0.2372	0.28	0.47	0.44	0.41	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.055787	NA	NA	NA	NA	NA	0.304	NA	4.7237
1180	9	139686556	139686556	G	A	intronic	TMEM141	NA	NA	NA	intronic	ENSG00000244187	NA	NA	NA	NA	NA	9q34.3	NA	Name=CTCF	NA	NA	rs2784041	0.3	0.3	0.289	0.334465	0.2763	0.1498	0.2853	0.5023	0.3926	0.29	0.13	0.28	0.52	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.713879	NA	NA	NA	NA	NA	0.362	NA	4.7237
1180	19	22321245	22321245	A	G	intergenic	ZNF257,ZNF676	dist=47342;dist=40658	NA	NA	ncRNA_exonic	ENSG00000268140	NA	NA	NA	Score=611;Name=lod=404	NA	19p12	NA	NA	NA	NA	rs3813592	0.24	0.24	0.236	0.263978	0.2763	0.3651	0.232	0.0522	0.456	0.26	0.37	0.28	0.06	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.991108	NA	NA	NA	NA	NA	0.21	NA	4.7237
1180	19	22321273	22321273	C	T	intergenic	ZNF257,ZNF676	dist=47370;dist=40630	NA	NA	ncRNA_exonic	ENSG00000268140	NA	NA	NA	Score=611;Name=lod=404	NA	19p12	NA	NA	NA	NA	rs3813590	0.25	0.25	0.238	0.263778	0.2763	0.3641	0.232	0.0522	0.456	0.26	0.37	0.28	0.06	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.665258	NA	NA	NA	NA	NA	0.203	NA	4.7237
1180	19	3730041	3730041	C	T	exonic	TJP3	NA	synonymous SNV	TJP3:NM_001267560:exon4:c.C174T:p.I58I,TJP3:NM_001267561:exon4:c.C201T:p.I67I	exonic	ENSG00000105289	NA	synonymous SNV	ENSG00000105289:ENST00000262968:exon3:c.C231T:p.I77I,ENSG00000105289:ENST00000539908:exon3:c.C66T:p.I22I,ENSG00000105289:ENST00000587686:exon3:c.C231T:p.I77I,ENSG00000105289:ENST00000382008:exon4:c.C174T:p.I58I,ENSG00000105289:ENST00000541714:exon4:c.C174T:p.I58I,ENSG00000105289:ENST00000589378:exon4:c.C201T:p.I67I,ENSG00000105289:ENST00000590545:exon4:c.C204T:p.I68I	NA	NA	19p13.3	Score=820;Name=V$PAX3_01	NA	NA	NA	rs7258176	0.7	0.7	0.698	0.70647	0.6421	0.6429	0.7997	0.7579	0.7025	0.63	0.69	0.77	0.75	0.6675	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.010935	NA	NA	0.633721	0.750113	NA	0.775	NA	4.7233456
1180	19	17003789	17003789	T	G	UTR3	CPAMD8	NM_015692:c.*130A>C	NA	NA	UTR3	ENSG00000160111	ENST00000443236:c.*130A>C,ENST00000594249:c.*1438A>C	NA	NA	NA	NA	19p13.11	NA	Name=TCF12,BATF,EBF1_(C-8)	Name=8	NA	rs773901	0.53	0.53	0.536	0.564097	0.5398	0.3026	0.5893	0.7973	0.5256	0.51	0.29	0.6	0.78	0.5377	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.633492	NA	NA	0.532647	0.756849	NA	0.536	NA	4.7231864
1180	11	32460575	32460575	T	C	ncRNA_exonic	WT1-AS	NA	NA	NA	ncRNA_exonic	ENSG00000183242	NA	NA	NA	NA	NA	11p13	NA	NA	Name=12	NA	rs11031784	0.45	0.45	0.429	0.489217	0.2714	0.7431	0.4121	0.4183	0.6022	0.27	0.75	0.39	0.41	0.3804	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.410628	NA	NA	0.291928	0.409855	NA	0.478	NA	4.7229386
1180	3	31495219	31495219	C	A	intergenic	GADL1,STT3B	dist=559066;dist=79272	NA	NA	ncRNA_exonic	ENSG00000227339	NA	NA	NA	Score=462;Name=lod=101	NA	3p23	NA	NA	NA	NA	rs11708946	0.28	0.28	0.278	0.235823	0.2773	0.372	0.2464	0.1452	0.1677	0.26	0.42	0.28	0.13	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.027432	NA	NA	NA	NA	NA	0.174	NA	4.7227
1180	5	68396580	68396580	G	A	intronic	SLC30A5	NA	NA	NA	intronic	ENSG00000145740	NA	NA	NA	NA	NA	5q13.1	NA	NA	Name=2	NA	rs12522805	0.26	0.26	0.269	0.273962	0.2773	0.1637	0.245	0.3517	0.2996	0.28	0.17	0.24	0.33	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.388545	NA	NA	NA	NA	NA	0.304	NA	4.7227
1180	6	33145369	33145369	C	A	intronic	COL11A2	NA	NA	NA	intronic	ENSG00000204248	NA	NA	NA	NA	NA	6p21.32	NA	Name=YY1	NA	NA	rs2076311	0.29	0.29	0.332	0.322284	0.2773	0.2431	0.2738	0.3865	0.3978	0.27	0.26	0.22	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.233969	NA	NA	NA	NA	NA	0.254	NA	4.7227
1180	13	31821256	31821256	C	G	intronic	B3GALTL	NA	NA	NA	intronic	ENSG00000187676	NA	NA	NA	NA	NA	13q12.3	NA	NA	Name=5	NA	rs9542307	0.28	0.28	0.261	0.247604	0.4493	0.0675	0.3141	0.2337	0.1973	0.44	0.05	0.36	0.23	0.3617	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.589622	NA	NA	0.466628	0.283704	NA	0.29	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000082786.1;CLNDSDB=.;CLNDSDBID=.	4.722372
1180	1	214786635	214786635	A	C	intronic	CENPF	NA	NA	NA	ncRNA_exonic	ENSG00000224584	NA	NA	NA	Score=726;Name=lod=1187	NA	1q41	NA	NA	NA	NA	rs2807663	0.54	0.54	0.539	0.53155	0.6113	0.2798	0.5259	0.6952	0.4918	0.6	0.28	0.59	0.69	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.346349	NA	NA	NA	NA	NA	0.645	NA	4.7220333
1180	3	1269680	1269680	G	A	intronic	CNTN6	NA	NA	NA	intronic	ENSG00000134115	NA	NA	NA	Score=492;Name=lod=133	NA	3p26.3	NA	NA	NA	NA	rs62229416	0.05	0.05	0.039	0.047524	0.0944	0.0188	0.0476	0.0098	0.0798	0.1	0.02	0.06	0.01	0.0785	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.58742	1.58742	NA	0.105116	0.031094	NA	0.08	NA	4.721984
1180	2	101898412	101898412	G	C	exonic	RNF149	NA	nonsynonymous SNV	RNF149:NM_173647:exon6:c.C1068G:p.D356E	exonic	ENSG00000163162	NA	nonsynonymous SNV	ENSG00000163162:ENST00000295317:exon6:c.C1068G:p.D356E,ENSG00000163162:ENST00000424632:exon6:c.C1068G:p.D356E	NA	NA	2q11.2	NA	NA	NA	NA	rs13151	0.86	0.86	0.831	0.846046	0.8738	1	0.9135	0.6278	0.9059	0.87	1	0.9	0.64	0.871	1	0.63	T	0.0	B	0.0	B	0.384	N	1.000	P	0	N	3.16	T	-1.053	T	0.000	T	0.017	-0.613	1.272	-1.9	-0.942	-0.698	3.189	-0.612906	NA	1	0.866744	0.688379	NA	0.79	NA	4.7217894
1180	1	153197719	153197719	G	A	intergenic	PRR9,LOR	dist=5926;dist=34460	NA	NA	ncRNA_exonic	ENSG00000230779	NA	NA	NA	Score=805;Name=lod=2494	NA	1q21.3	NA	NA	NA	NA	rs943133	0.15	0.15	0.127	0.133786	0.2783	0.0685	0.1556	0.0454	0.1564	0.28	0.05	0.17	0.05	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.167233	NA	NA	NA	NA	NA	0.283	NA	4.7217
1180	15	22782355	22782355	G	A	intergenic	GOLGA6L1,TUBGCP5	dist=36353;dist=51040	NA	NA	ncRNA_intronic	ENSG00000259400	NA	NA	NA	Score=325;Name=lod=28	NA	15q11.2	NA	NA	NA	NA	rs4073409	0.39	0.39	0.397	0.394169	0.2783	0.4831	0.2406	0.5386	0.3354	0.27	0.5	0.24	0.55	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.473925	NA	NA	NA	NA	NA	0.333	NA	4.7217
1180	17	48313291	48313291	T	C	intergenic	COL1A1,TMEM92	dist=34291;dist=35476	NA	NA	ncRNA_exonic	ENSG00000249838	NA	NA	NA	Score=676;Name=lod=745	NA	17q21.33	NA	NA	NA	NA	rs4794120	0.31	0.31	0.3	0.332867	0.2783	0.3929	0.3213	0.3064	0.3712	0.26	0.39	0.32	0.3	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.078791	NA	NA	NA	NA	NA	0.384	NA	4.7217
1180	1	152487979	152487979	C	T	exonic	CRCT1	NA	synonymous SNV	CRCT1:NM_019060:exon2:c.C120T:p.C40C	exonic	ENSG00000169509	NA	synonymous SNV	ENSG00000169509:ENST00000368790:exon2:c.C120T:p.C40C	NA	NA	1q21.3	NA	NA	Name=20	NA	rs2282296	0.52	0.52	0.498	0.479633	0.6213	0.6081	0.5245	0.1611	0.6002	0.63	0.64	0.57	0.16	0.642	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.195382	NA	NA	0.68225	0.328075	NA	0.435	NA	4.7211166
1180	14	94942391	94942391	G	A	intronic	SERPINA9	NA	NA	NA	intronic	ENSG00000170054	NA	NA	NA	NA	NA	14q32.13	NA	Name=Pol2	NA	NA	rs10146263	0.17	0.17	0.193	0.132188	0.16	0.1895	0.1095	0.1142	0.0849	0.16	0.23	0.09	0.16	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.096561	NA	NA	0.119107	0.133671	NA	0.101	NA	4.720893
1180	1	153198205	153198205	A	G	intergenic	PRR9,LOR	dist=6412;dist=33974	NA	NA	ncRNA_exonic	ENSG00000230779	NA	NA	NA	Score=805;Name=lod=2494	NA	1q21.3	NA	NA	NA	NA	rs1831237	0.15	0.15	0.127	0.134185	0.2793	0.0685	0.1556	0.0454	0.1575	0.28	0.05	0.17	0.05	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.003681	NA	NA	NA	NA	NA	0.283	NA	4.7207
1180	1	153198457	153198457	A	C	intergenic	PRR9,LOR	dist=6664;dist=33722	NA	NA	ncRNA_exonic	ENSG00000230779	NA	NA	NA	Score=805;Name=lod=2494	NA	1q21.3	NA	NA	NA	NA	rs1410862	0.15	0.15	0.13	0.135583	0.2793	0.0685	0.1571	0.0507	0.1564	0.28	0.05	0.17	0.06	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.017122	NA	NA	NA	NA	NA	0.283	NA	4.7207
1180	1	242223399	242223399	A	G	intergenic	MAP1LC3C,PLD5	dist=61014;dist=28290	NA	NA	ncRNA_exonic	ENSG00000224625	NA	NA	NA	Score=841;Name=lod=3496	NA	1q43	NA	NA	NA	NA	rs871765	0.27	0.27	0.255	0.245807	0.2793	0.2599	0.2522	0.2307	0.2127	0.29	0.26	0.28	0.25	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.031067	NA	NA	NA	NA	NA	0.196	NA	4.7207
1180	7	112125099	112125099	G	A	intronic	LSMEM1	NA	NA	NA	intronic	ENSG00000181016	NA	NA	NA	NA	NA	7q31.1	NA	Name=Egr-1,STAT3,GR,CEBPB	NA	NA	rs3095028	0.18	0.18	0.146	0.165535	0.2793	0.0298	0.1686	0.2103	0.1258	0.27	0.03	0.2	0.21	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.92672	NA	NA	NA	NA	NA	0.203	NA	4.7207
1180	19	45857820	45857820	G	A	intronic	ERCC2	NA	NA	NA	intronic	ENSG00000104884	NA	NA	NA	NA	NA	19q13.32	NA	Name=GATA-1	NA	NA	rs238414	0.43	0.43	0.464	0.420327	0.2793	0.4077	0.3357	0.7292	0.2209	0.29	0.41	0.36	0.72	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.624371	NA	NA	NA	NA	NA	0.486	NA	4.7207
1180	1	186057181	186057181	T	C	ncRNA_intronic	MIR548F1	NA	NA	NA	intronic	ENSG00000143341	NA	NA	NA	Score=683;Name=lod=793	NA	1q31.1	Score=850;Name=V$OCT1_02	NA	NA	NA	rs10911816	0.67	0.67	0.688	0.686502	0.5139	0.5942	0.6686	0.969	0.59	0.53	0.62	0.67	0.96	0.5898	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.598541	2.598541	NA	0.50907	0.892873	NA	0.725	NA	4.7205633
1180	8	22571018	22571018	A	G	exonic	PEBP4	NA	synonymous SNV	PEBP4:NM_144962:exon7:c.T549C:p.R183R	exonic	ENSG00000134020	NA	synonymous SNV	ENSG00000134020:ENST00000256404:exon7:c.T549C:p.R183R	NA	NA	8p21.3	NA	NA	NA	NA	rs1047398	0.32	0.32	0.276	0.286941	0.3231	0.2996	0.4582	0.2436	0.1738	0.32	0.29	0.43	0.26	0.3089	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.376309	NA	NA	0.314334	0.262677	NA	0.268	NA	4.7203326
1180	1	202861566	202861566	A	G	UTR3	KLHL12	NM_021633:c.*95T>C	NA	NA	UTR3	ENSG00000117153	ENST00000367261:c.*95T>C,ENST00000367259:c.*199T>C,ENST00000435533:c.*95T>C	NA	NA	Score=355;Name=lod=37	NA	1q32.1	NA	NA	NA	NA	rs1042990	0.47	0.47	0.452	0.45008	0.6133	0.3155	0.5259	0.4266	0.3988	0.63	0.3	0.51	0.41	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.077242	NA	NA	NA	NA	NA	0.399	NA	4.7200334
1180	7	100815279	100815279	G	A	UTR3	NAT16	NM_198571:c.*81C>T	NA	NA	UTR3	ENSG00000167011	ENST00000300303:c.*81C>T,ENST00000455377:c.*81C>T	NA	NA	NA	NA	7q22.1	NA	Name=CtBP2	NA	NA	rs740103	0.5	0.5	0.437	0.471645	0.6133	0.4712	0.6556	0.2405	0.5082	0.63	0.51	0.62	0.22	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.303938	NA	NA	NA	NA	NA	0.435	NA	4.7200334
1180	3	155894394	155894394	A	G	intronic	KCNAB1	NA	NA	NA	ncRNA_exonic	ENSG00000227709	NA	NA	NA	Score=796;Name=lod=2291	NA	3q25.31	NA	NA	NA	NA	rs7625723	0.7	0.7	0.664	0.648363	0.6133	0.9107	0.7651	0.5325	0.4877	0.61	0.94	0.72	0.53	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.546868	NA	NA	NA	NA	NA	0.681	NA	4.7200333
1180	1	20945055	20945055	C	T	exonic	CDA	NA	synonymous SNV	CDA:NM_001785:exon4:c.C435T:p.T145T	exonic	ENSG00000158825	NA	synonymous SNV	ENSG00000158825:ENST00000375071:exon4:c.C435T:p.T145T	NA	NA	1p36.12	NA	NA	NA	NA	rs1048977	0.31	0.31	0.325	0.311102	0.3231	0.244	0.317	0.379	0.272	0.33	0.25	0.31	0.37	0.3088	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.072616	NA	NA	0.314884	0.395824	ID=COSM146436;OCCURENCE=1(stomach)	0.312	NA	4.7198826
1180	7	6974888	6974888	T	C	intergenic	CCZ1B,LOC100131257	dist=108962;dist=140513	NA	NA	ncRNA_exonic	ENSG00000242731	NA	NA	NA	NA	NA	7p22.1	NA	Name=ERalpha_a	NA	NA	rs4433045	0.4	0.4	0.285	0.40635	0.2803	0.7431	0.2983	0.3389	0.3569	0.27	0.7	0.3	0.33	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.363682	NA	NA	NA	NA	NA	NA	NA	4.7197
1180	9	121526407	121526407	A	G	intergenic	TLR4,DBC1	dist=1046638;dist=402501	NA	NA	ncRNA_exonic	ENSG00000231166	NA	NA	NA	Score=760;Name=lod=1635	NA	9q33.1	NA	NA	NA	NA	rs1472883	0.33	0.33	0.306	0.34345	0.2803	0.2341	0.3213	0.4773	0.3558	0.28	0.26	0.33	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.506314	NA	NA	NA	NA	NA	0.355	NA	4.7197
1180	2	20491212	20491212	G	A	intronic	PUM2	NA	NA	NA	intronic	ENSG00000055917	NA	NA	NA	NA	NA	2p24.1	NA	Name=ZNF263	NA	NA	rs11096655	0.41	0.41	0.378	0.411542	0.2803	0.7391	0.4597	0.23	0.4202	0.29	0.74	0.39	0.22	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.68014	NA	NA	NA	NA	NA	0.275	NA	4.7197
1180	3	170213413	170213413	G	A	intronic	SLC7A14	NA	NA	NA	intronic	ENSG00000013293,ENSG00000013297	NA	NA	NA	Score=722;Name=lod=1141	NA	3q26.2	NA	NA	NA	NA	rs11718678	0.35	0.35	0.328	0.375998	0.2803	0.1806	0.3386	0.7118	0.2485	0.27	0.17	0.34	0.68	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.577028	NA	NA	NA	NA	NA	0.37	NA	4.7197
1180	14	96776008	96776008	A	G	intronic	ATG2B	NA	NA	NA	intronic	ENSG00000066739	NA	NA	NA	NA	NA	14q32.2	NA	Name=USF-1	NA	NA	rs2289628	0.23	0.23	0.202	0.235423	0.2803	0.2351	0.2363	0.1732	0.273	0.28	0.22	0.25	0.16	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.530091	NA	NA	NA	NA	NA	0.188	NA	4.7197
1180	21	35230921	35230921	G	C	intronic	ITSN1	NA	NA	NA	intronic	ENSG00000205726,ENSG00000249209	NA	NA	NA	NA	NA	21q22.11	NA	NA	Name=3	NA	rs2073366	0.27	0.27	0.232	0.253195	0.2803	0.4782	0.2536	0.0234	0.3037	0.28	0.46	0.27	0.03	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.956896	NA	NA	NA	NA	NA	0.268	NA	4.7197
1180	22	42397026	42397026	A	G	intronic	WBP2NL	NA	NA	NA	intronic	ENSG00000183066	NA	NA	NA	Score=399;Name=lod=56	NA	22q13.2	NA	NA	NA	NA	rs9623489	0.25	0.25	0.253	0.261182	0.2803	0.0565	0.3876	0.348	0.2454	0.28	0.05	0.42	0.32	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.750933	NA	NA	NA	NA	NA	0.457	NA	4.7197
1180	1	145588536	145588536	C	T	intronic	NBPF10,NUDT17	NA	NA	NA	intronic	ENSG00000186364	NA	NA	NA	NA	NA	1q21.1	NA	Name=USF-1,CTCF,Pol2,USF2	Name=97	NA	rs9286836	0.69	0.69	0.687	0.698682	0.6362	0.8353	0.6441	0.6059	0.7863	0.63	0.86	0.63	0.61	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.162389	NA	NA	0.644563	0.59104	NA	0.623	NA	4.719237
1180	16	21082163	21082163	C	T	intronic	DNAH3	NA	NA	NA	intronic	ENSG00000158486	NA	NA	NA	NA	NA	16p12.3	NA	Name=USF2	NA	NA	rs75686265	0.09	0.09	0.08	0.0966454	0.0875	0.0813	0.085	0.0877	0.1421	0.1	0.06	0.09	0.09	0.1065	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.057782	NA	NA	0.087209	0.078601	NA	0.08	NA	4.718791
1180	3	31494587	31494587	G	A	intergenic	GADL1,STT3B	dist=558434;dist=79904	NA	NA	ncRNA_exonic	ENSG00000227339	NA	NA	NA	NA	NA	3p23	NA	Name=CTCF	NA	NA	rs17027714	0.36	0.36	0.348	0.326078	0.2813	0.623	0.3357	0.1884	0.2454	0.27	0.65	0.36	0.18	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.546809	NA	NA	NA	NA	NA	0.225	NA	4.7187
1180	4	158238830	158238830	T	C	exonic	GRIA2	NA	synonymous SNV	GRIA2:NM_000826:exon5:c.T687C:p.H229H,GRIA2:NM_001083619:exon5:c.T687C:p.H229H,GRIA2:NM_001083620:exon5:c.T546C:p.H182H	exonic	ENSG00000120251	NA	synonymous SNV	ENSG00000120251:ENST00000449365:exon4:c.T546C:p.H182H,ENSG00000120251:ENST00000264426:exon5:c.T687C:p.H229H,ENSG00000120251:ENST00000296526:exon5:c.T687C:p.H229H,ENSG00000120251:ENST00000323661:exon5:c.T546C:p.H182H,ENSG00000120251:ENST00000393815:exon5:c.T546C:p.H182H,ENSG00000120251:ENST00000503437:exon5:c.T306C:p.H102H,ENSG00000120251:ENST00000507898:exon5:c.T546C:p.H182H	Score=597;Name=lod=356	NA	4q32.1	NA	NA	NA	NA	rs4302506	0.67	0.67	0.606	0.660144	0.6252	0.7897	0.755	0.4841	0.7331	0.64	0.81	0.74	0.49	0.6761	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.912755	NA	NA	0.646805	0.51299	ID=COSM1131203,COSM1131202;OCCURENCE=1(prostate)	0.616	NA	4.7185616
1180	16	81726863	81726863	C	G	intronic	CMIP	NA	NA	NA	intronic	ENSG00000153815	NA	NA	NA	NA	NA	16q23.3	NA	Name=Pol2,Max	Name=48	NA	rs2288011	0.38	0.38	0.384	0.356829	0.4125	0.247	0.317	0.5242	0.2147	0.4	0.26	0.35	0.5	0.4362	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.019276	NA	NA	0.432747	0.494942	NA	0.391	NA	4.718553
1180	1	179520254	179520254	C	G	UTR3	NPHS2	NM_014625:c.*54G>C	NA	NA	UTR3	ENSG00000116218	ENST00000367616:c.*54G>C,ENST00000367615:c.*54G>C	NA	NA	NA	NA	1q25.2	NA	Name=JunD	NA	NA	rs1410591	0.57	0.57	0.55	0.587859	0.6153	0.4911	0.6354	0.5946	0.6166	0.6	0.52	0.68	0.52	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.313254	NA	NA	NA	NA	NA	0.63	NA	4.7180334
1180	1	202881302	202881302	C	T	intronic	KLHL12	NA	NA	NA	ncRNA_exonic	ENSG00000230280	NA	NA	NA	Score=596;Name=lod=354	NA	1q32.1	NA	NA	NA	NA	rs6692075	0.48	0.48	0.435	0.447883	0.6153	0.3155	0.5259	0.4153	0.4008	0.63	0.32	0.52	0.4	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.719765	NA	NA	NA	NA	NA	0.42	NA	4.7180333
1180	1	96884286	96884286	T	A	intergenic	FLJ31662,PTBP2	dist=939374;dist=302889	NA	NA	ncRNA_exonic	ENSG00000234422	NA	NA	NA	Score=613;Name=lod=414	NA	1p21.3	NA	NA	NA	NA	rs2011694	0.23	0.23	0.177	0.223842	0.2823	0.3571	0.4121	0.0159	0.1738	0.22	0.36	0.34	0.03	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.071025	NA	NA	NA	NA	NA	NA	NA	4.7177
1180	1	96884287	96884287	G	A	intergenic	FLJ31662,PTBP2	dist=939375;dist=302888	NA	NA	ncRNA_exonic	ENSG00000234422	NA	NA	NA	Score=613;Name=lod=414	NA	1p21.3	NA	NA	NA	NA	rs2011693	0.23	0.23	0.18	0.223842	0.2823	0.3571	0.4121	0.0159	0.1738	0.22	0.36	0.34	0.03	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.91639	NA	NA	NA	NA	NA	NA	NA	4.7177
1180	19	34080511	34080511	G	C	intergenic	PEPD,CHST8	dist=67712;dist=32350	NA	NA	ncRNA_exonic	ENSG00000232429	NA	NA	NA	Score=753;Name=lod=1535	NA	19q13.11	NA	NA	NA	NA	rs12609032	0.17	0.17	0.115	0.173722	0.2823	0.1141	0.1945	0.0386	0.2914	0.27	0.11	0.23	0.04	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.27518	1.27518	NA	NA	NA	NA	0.159	NA	4.7177
1180	7	150439500	150439500	C	T	exonic	GIMAP1-GIMAP5,GIMAP5	NA	synonymous SNV	GIMAP5:NM_018384:exon3:c.C273T:p.A91A,GIMAP1-GIMAP5:NM_001199577:exon6:c.C885T:p.A295A	exonic	ENSG00000196329	NA	synonymous SNV	ENSG00000196329:ENST00000358647:exon3:c.C273T:p.A91A	NA	NA	7q36.1	NA	NA	NA	NA	rs759011	0.36	0.36	0.369	0.389976	0.3082	0.3006	0.2651	0.5696	0.4121	0.31	0.3	0.3	0.56	0.3343	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.177948	NA	NA	0.307209	0.545847	ID=COSM452610;OCCURENCE=1(breast)	0.464	NA	4.7169576
1180	16	2105400	2105400	C	T	intronic	TSC2	NA	NA	NA	intronic	ENSG00000103197	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs1800720	0.09	0.09	0.077	0.0920527	0.0994	NA	0.0937	0.208	0.0215	0.1	NA	0.09	0.19	0.0871	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.321883	NA	NA	0.096628	0.190628	NA	0.174	CLINSIG=untested|untested|untested|untested|probable-non-pathogenic;CLNDBN=Tuberous_sclerosis_syndrome|Neoplasm_of_brain|Lymphangiomyomatosis|Tuberous_sclerosis_syndrome|not_specified;CLNREVSTAT=not|not|not|not|single;CLNACC=RCV000043224.2|RCV000055133.1|RCV000055419.1|RCV000055419.1|RCV000118710.2;CLNDSDB=GeneReviews:MedGen:OMIM:SNOMED_CT|MedGen:SNOMED_CT|MedGen:OMIM:Orphanet:SNOMED_CT|GeneReviews:MedGen:OMIM:SNOMED_CT|.;CLNDSDBID=NBK1220:C0041341:191100:7199000|C0006118:126952004|C0751674:606690:ORPHA538:73017001|NBK1220:C0041341:191100:7199000|.	4.716872
1180	6	85998172	85998172	G	A	intergenic	TBX18,NT5E	dist=524218;dist=161130	NA	NA	ncRNA_exonic	ENSG00000213211	NA	NA	NA	Score=656;Name=lod=617	NA	6q14.3	NA	NA	NA	NA	rs313228	0.37	0.37	0.336	0.387979	0.2833	0.5823	0.428	0.1838	0.5429	0.29	0.63	0.42	0.15	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.301393	NA	NA	NA	NA	NA	0.246	NA	4.7167
1180	12	110006512	110006512	A	G	intronic	MMAB	NA	NA	NA	intronic	ENSG00000139428	NA	NA	NA	NA	NA	12q24.11	NA	NA	Name=2	NA	rs11836136	0.3	0.3	0.298	0.294928	0.2833	0.1577	0.2954	0.4796	0.1984	0.29	0.15	0.31	0.49	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.231843	NA	NA	NA	NA	NA	0.312	NA	4.7167
1180	13	29173349	29173349	G	A	intergenic	FLT1,POMP	dist=104084;dist=59792	NA	NA	ncRNA_exonic	ENSG00000235472	NA	NA	NA	Score=798;Name=lod=2344	NA	13q12.3	NA	NA	NA	NA	rs7317291	0.31	0.31	0.349	0.316294	0.2833	0.3006	0.17	0.4652	0.2689	0.28	0.3	0.17	0.48	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.139687	NA	NA	NA	NA	NA	0.413	NA	4.7167
1180	16	28251277	28251277	C	T	intergenic	XPO6,SBK1	dist=28038;dist=52563	NA	NA	ncRNA_exonic	ENSG00000250982	NA	NA	NA	Score=780;Name=lod=1965	NA	16p11.2	NA	NA	NA	NA	rs8057071	0.32	0.32	0.286	0.342252	0.2833	0.2778	0.428	0.4402	0.2761	0.29	0.25	0.4	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.798295	NA	NA	NA	NA	NA	0.29	NA	4.7167
1180	6	150385730	150385730	T	G	downstream	ULBP3	NA	NA	NA	intronic	ENSG00000131019	NA	NA	NA	NA	NA	6q25.1	NA	NA	NA	NA	rs912558	0.36	0.36	0.341	0.367212	0.3628	0.4107	0.3746	0.2882	0.4284	0.36	0.37	0.42	0.3	0.3765	0.42	0.02	D	.	.	.	.	.	.	1.000	P	.	.	.	.	-1.019	T	0.046	T	.	0.059	4.321	-1.31	-0.258	-0.528	3.463	0.05895	NA	0.02	0.377442	0.288016	NA	0.391	NA	4.7165913
1180	21	46086827	46086827	C	A	UTR5	KRTAP12-2	NM_181684:c.-24G>T	NA	NA	UTR5	ENSG00000221864	ENST00000360770:c.-24G>T	NA	NA	NA	NA	21q22.3	NA	Name=c-Myc,HA-E2F1	NA	NA	rs55914221	0.16	0.16	0.143	0.157348	0.2078	0.0923	0.1686	0.1346	0.1953	0.21	0.1	0.17	0.12	0.2073	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.708336	NA	NA	0.201771	0.13435	NA	0.08	NA	4.7164624
1180	7	143016928	143016928	C	T	exonic	CLCN1	NA	synonymous SNV	CLCN1:NM_000083:exon2:c.C261T:p.T87T	exonic	ENSG00000188037	NA	synonymous SNV	ENSG00000188037:ENST00000343257:exon2:c.C261T:p.T87T	NA	NA	7q34	NA	NA	NA	NA	rs6962852	0.29	0.29	0.319	0.322883	0.328	0.0427	0.2378	0.5961	0.2975	0.34	0.04	0.25	0.56	0.2966	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.214803	NA	NA	0.325814	0.568316	NA	0.355	NA	4.7162526
1180	7	22165180	22165180	G	A	intronic	RAPGEF5	NA	NA	NA	intronic	ENSG00000136237	NA	NA	NA	NA	NA	7p15.3	NA	NA	Name=4	NA	rs2302000	0.13	0.13	0.111	0.148762	0.0875	0.3204	0.0562	0.0333	0.2566	0.08	0.3	0.07	0.03	0.1117	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.079791	NA	NA	0.084584	0.041925	NA	0.058	NA	4.716216
1180	7	150555915	150555915	A	G	exonic	ABP1	NA	synonymous SNV	ABP1:NM_001091:exon3:c.A1635G:p.P545P,ABP1:NM_001272072:exon3:c.A1635G:p.P545P	exonic	ENSG00000002726	NA	synonymous SNV	ENSG00000002726:ENST00000360937:exon3:c.A1635G:p.P545P,ENSG00000002726:ENST00000416793:exon3:c.A1635G:p.P545P,ENSG00000002726:ENST00000467291:exon5:c.A1635G:p.P545P,ENSG00000002726:ENST00000493429:exon5:c.A1635G:p.P545P	NA	NA	7q36.1	NA	NA	NA	NA	rs10893	0.43	0.43	0.435	0.459065	0.2734	0.4792	0.3977	0.5643	0.5307	0.29	0.51	0.41	0.56	0.3752	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.263535	NA	NA	0.302106	0.471202	NA	0.486	NA	4.7159606
1180	1	111391513	111391513	C	T	intergenic	KCNA3,CD53	dist=173858;dist=22308	NA	NA	ncRNA_exonic	ENSG00000237415	NA	NA	NA	Score=670;Name=lod=705	NA	1p13.3	NA	NA	NA	NA	rs12750061	0.21	0.21	0.184	0.208466	0.2843	0.1181	0.2968	0.1059	0.2996	0.28	0.14	0.32	0.11	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.037373	NA	NA	NA	NA	NA	0.283	NA	4.7157
1180	7	6974895	6974895	T	C	intergenic	CCZ1B,LOC100131257	dist=108969;dist=140506	NA	NA	ncRNA_exonic	ENSG00000242731	NA	NA	NA	NA	NA	7p22.1	NA	Name=ERalpha_a	NA	NA	rs4433046	0.39	0.39	0.258	0.410144	0.2843	0.745	0.2997	0.3472	0.3579	0.26	0.67	0.3	0.32	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.257492	NA	NA	NA	NA	NA	NA	NA	4.7157
1180	8	23156281	23156281	C	T	intronic	LOXL2	NA	NA	NA	intronic	ENSG00000134013	NA	NA	NA	NA	NA	8p21.3	NA	NA	Name=40	NA	rs62503960	0.16	0.16	0.145	0.126997	0.2843	0.0536	0.2161	0.028	0.1115	0.28	0.05	0.24	0.04	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.091477	NA	NA	NA	NA	NA	0.174	NA	4.7157
1180	10	30986348	30986348	G	A	intergenic	LYZL2,ZNF438	dist=67701;dist=147217	NA	NA	ncRNA_exonic	ENSG00000234814	NA	NA	NA	NA	NA	10p11.23	NA	NA	Name=2	NA	rs4749588	0.24	0.24	0.22	0.240615	0.2843	0.2599	0.3329	0.0946	0.3078	0.28	0.24	0.3	0.11	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.176229	NA	NA	NA	NA	NA	0.094	NA	4.7157
1180	15	84945185	84945185	C	T	intergenic	GOLGA6L4,DNM1P41	dist=31065;dist=100621	NA	NA	ncRNA_exonic	ENSG00000259683	NA	NA	NA	Score=321;Name=lod=27	NA	15q25.2	NA	NA	NA	NA	rs3860265	0.18	0.18	0.158	0.148562	0.2843	0.125	0.1816	0.0121	0.1943	0.3	0.14	0.21	0.01	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00643	NA	NA	NA	NA	NA	0.116	NA	4.7157
1180	15	84945512	84945512	C	T	intergenic	GOLGA6L4,DNM1P41	dist=31392;dist=100294	NA	NA	ncRNA_intronic	ENSG00000259683	NA	NA	NA	Score=469;Name=lod=107	NA	15q25.2	NA	NA	NA	NA	rs2401432	0.18	0.18	0.137	0.148762	0.2843	0.126	0.1816	0.0121	0.1943	0.3	0.14	0.21	0.01	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.739905	NA	NA	NA	NA	NA	0.13	NA	4.7157
1180	15	84958318	84958318	G	A	intergenic	GOLGA6L4,DNM1P41	dist=44198;dist=87488	NA	NA	ncRNA_exonic	ENSG00000235370	NA	NA	NA	Score=300;Name=lod=22	NA	15q25.2	NA	NA	NA	NA	rs12910334	0.18	0.18	0.153	0.148363	0.2843	0.123	0.1844	0.0121	0.1933	0.29	0.13	0.21	0.01	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.615905	NA	NA	NA	NA	NA	0.094	NA	4.7157
1180	15	84958359	84958359	G	A	intergenic	GOLGA6L4,DNM1P41	dist=44239;dist=87447	NA	NA	ncRNA_exonic	ENSG00000235370	NA	NA	NA	Score=300;Name=lod=22	NA	15q25.2	NA	NA	NA	NA	rs142959789	0.16	0.16	0.083	0.148962	0.2843	0.123	0.1888	0.0121	0.1933	0.28	0.11	0.2	0.02	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.525324	NA	NA	NA	NA	NA	NA	NA	4.7157
1180	17	41150949	41150949	G	A	intronic	RPL27	NA	NA	NA	intronic	ENSG00000131469	NA	NA	NA	NA	NA	17q21.31	NA	Name=CHD2_(N-1250),c-Myc,Pol2-4H8	Name=71	NA	rs2271539	0.53	0.53	0.508	0.480232	0.6421	0.5754	0.6527	0.1331	0.5624	0.64	0.61	0.63	0.17	0.6422	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.036474	NA	NA	NA	NA	NA	0.543	NA	4.7157
1180	19	18396297	18396297	A	G	intergenic	MIR3188,LSM4	dist=3326;dist=20743	NA	NA	ncRNA_exonic	ENSG00000241464	NA	NA	NA	Score=604;Name=lod=379	NA	19p13.11	NA	NA	NA	NA	rs4808124	NA	NA	NA	0.246006	0.2843	0.4573	0.3386	0.0545	0.182	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.272597	NA	NA	NA	NA	NA	NA	NA	4.7157
1180	19	18396298	18396298	G	A	intergenic	MIR3188,LSM4	dist=3327;dist=20742	NA	NA	ncRNA_exonic	ENSG00000241464	NA	NA	NA	Score=604;Name=lod=379	NA	19p13.11	NA	NA	NA	NA	rs4808125	0.28	0.28	NA	0.246006	0.2843	0.4573	0.3386	0.0545	0.182	0.28	0.44	0.3	0.07	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.544509	NA	NA	NA	NA	NA	NA	NA	4.7157
1180	19	58727821	58727821	C	T	intergenic	ZNF274,ZNF544	dist=2894;dist=12249	NA	NA	ncRNA_exonic	ENSG00000213013	NA	NA	NA	Score=731;Name=lod=1246	NA	19q13.43	NA	NA	NA	NA	rs12986378	0.16	0.16	0.126	0.127196	0.2843	NA	0.1787	0.0545	0.1585	0.29	NA	0.23	0.07	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.954147	NA	NA	NA	NA	NA	0.123	NA	4.7157
1180	19	4237067	4237067	A	G	exonic	EBI3	NA	synonymous SNV	EBI3:NM_005755:exon5:c.A672G:p.T224T	exonic	ENSG00000105246	NA	synonymous SNV	ENSG00000105246:ENST00000221847:exon5:c.A672G:p.T224T	NA	NA	19p13.3	NA	NA	NA	NA	rs4905	0.42	0.42	0.421	0.460863	0.3052	0.4435	0.2767	0.6679	0.4898	0.31	0.45	0.28	0.65	0.3602	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.135391	NA	NA	0.285698	0.618475	NA	0.42	NA	4.7155686
1181	12	10562025	10562025	C	T	exonic	KLRC4	NA	synonymous SNV	KLRC4:NM_013431:exon1:c.G150A:p.S50S	exonic	ENSG00000183542,ENSG00000255819	NA	synonymous SNV	ENSG00000183542:ENST00000309384:exon1:c.G150A:p.S50S	NA	NA	12p13.2	NA	Name=STAT1	NA	NA	rs1841957	0.54	0.54	0.513	0.49401	0.663	0.5605	0.6311	0.208	0.5409	0.66	0.61	0.62	0.24	0.6107	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.433948	NA	NA	0.678023	0.289055	NA	0.493	NA	4.7149436
1181	18	44561516	44561516	C	G	exonic	TCEB3B	NA	synonymous SNV	TCEB3B:NM_016427:exon1:c.G120C:p.T40T	exonic	ENSG00000206181	NA	synonymous SNV	ENSG00000206181:ENST00000332567:exon1:c.G120C:p.T40T	NA	NA	18q21.1	NA	NA	NA	NA	rs2571027	0.43	0.43	0.395	0.535144	0.4433	0.6448	0.6254	0.438	0.5838	0.37	0.56	0.5	0.32	0.5086	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.645229	NA	NA	NA	NA	NA	0.442	NA	4.7147666
1181	5	176814656	176814656	G	A	intronic	SLC34A1	NA	NA	NA	intronic	ENSG00000131183	NA	NA	NA	NA	NA	5q35.3	NA	Name=USF-1	NA	NA	rs33921462	0.2	0.2	0.178	0.180711	0.2853	0.1875	0.2305	0.0348	0.228	0.28	0.21	0.26	0.04	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.470355	NA	NA	NA	NA	NA	0.043	NA	4.7147
1181	15	84949664	84949664	A	G	intergenic	GOLGA6L4,DNM1P41	dist=35544;dist=96142	NA	NA	ncRNA_exonic	ENSG00000259570	NA	NA	NA	Score=454;Name=lod=93	NA	15q25.2	NA	NA	NA	NA	rs11632988	0.18	0.18	0.11	0.148962	0.2853	0.125	0.1816	0.0129	0.1943	0.29	0.13	0.21	0.02	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.191326	NA	NA	NA	NA	NA	0.014	NA	4.7147
1181	16	22262514	22262514	C	A	exonic	EEF2K	NA	synonymous SNV	EEF2K:NM_013302:exon6:c.C489A:p.G163G	exonic	ENSG00000103319	NA	synonymous SNV	ENSG00000103319:ENST00000263026:exon6:c.C489A:p.G163G,ENSG00000103319:ENST00000568269:exon6:c.C489A:p.G163G	NA	NA	16p12.2	NA	NA	NA	NA	rs2303186	0.5	0.5	0.503	0.521765	0.2803	0.8899	0.3444	0.5582	0.4673	0.27	0.86	0.36	0.54	0.3754	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.382514	NA	NA	0.296512	0.505007	NA	0.42	NA	4.7144546
1181	20	25848597	25848597	T	A	intergenic	FAM182B,LOC100134868	dist=66670;dist=141838	NA	NA	UTR5	ENSG00000175170	ENST00000376404:c.-92651A>T	NA	NA	NA	NA	20p11.1	NA	Name=ATF3,SETDB1	NA	NA	rs6050951	NA	NA	0.313	0.229034	0.1193	0.0129	0.2305	0.4977	0.2004	NA	NA	NA	NA	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.071991	NA	NA	NA	NA	NA	0.094	NA	4.7140334
1181	7	142460313	142460313	T	C	exonic	PRSS1	NA	synonymous SNV	PRSS1:NM_002769:exon4:c.T486C:p.D162D	exonic	ENSG00000204983	NA	synonymous SNV	ENSG00000204983:ENST00000492062:exon3:c.T336C:p.D112D,ENSG00000204983:ENST00000311737:exon4:c.T486C:p.D162D,ENSG00000204983:ENST00000486171:exon5:c.T528C:p.D176D	NA	NA	7q34	NA	NA	NA	NA	rs6666	NA	NA	NA	0.396565	0.5835	0.2192	0.5288	0.407	0.2791	NA	NA	NA	NA	0.3693	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.627946	NA	NA	NA	NA	NA	0.297	NA	4.7138666
1181	3	186951472	186951472	G	A	intronic	MASP1	NA	NA	NA	intronic	ENSG00000127241	NA	NA	NA	Score=578;Name=lod=297	NA	3q27.3	NA	NA	NA	NA	rs2002665	0.36	0.36	0.338	0.343251	0.2863	0.6617	0.353	0.1051	0.3885	0.29	0.68	0.33	0.12	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.131727	NA	NA	NA	NA	NA	0.225	NA	4.7137
1181	4	190876177	190876177	G	C	intronic	FRG1	NA	NA	NA	intronic	ENSG00000109536	NA	NA	NA	NA	NA	4q35.2	NA	NA	Name=6	NA	rs80264746	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2863	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.353492	NA	NA	NA	NA	NA	NA	NA	4.7137
1181	17	80054375	80054375	C	A	intronic	FASN	NA	NA	NA	intronic	ENSG00000169710	NA	NA	NA	NA	NA	17q25.3	NA	Name=Pol2	NA	NA	rs17848934	0.18	0.18	0.137	0.177516	0.2863	0.0734	0.1873	0.1528	0.1994	0.28	0.07	0.2	0.13	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.816549	NA	NA	NA	NA	NA	0.167	NA	4.7137
1181	19	49969085	49969085	C	T	exonic	ALDH16A1	NA	synonymous SNV	ALDH16A1:NM_001145396:exon12:c.C1506T:p.N502N,ALDH16A1:NM_153329:exon13:c.C1659T:p.N553N	exonic	ENSG00000161618	NA	synonymous SNV	ENSG00000161618:ENST00000600265:exon3:c.C306T:p.N102N,ENSG00000161618:ENST00000540132:exon10:c.C1170T:p.N390N,ENSG00000161618:ENST00000433981:exon11:c.C1164T:p.N388N,ENSG00000161618:ENST00000455361:exon12:c.C1506T:p.N502N,ENSG00000161618:ENST00000293350:exon13:c.C1659T:p.N553N	NA	NA	19q13.33	NA	NA	NA	NA	rs10853810	0.25	0.25	0.258	0.209265	0.335	0.005	0.2277	0.3427	0.0971	0.33	0.01	0.25	0.39	0.268	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.840156	NA	NA	0.350465	0.31616	ID=COSM1395250;OCCURENCE=1(large_intestine)	0.268	NA	4.7132016
1181	10	88718436	88718436	A	C	UTR5	SNCG	NM_003087:c.-19A>C	NA	NA	UTR5	ENSG00000173267	ENST00000348795:c.-19A>C,ENST00000372017:c.-19A>C	NA	NA	NA	NA	10q23.2	NA	Name=TAF1,HEY1,Pol2-4H8	Name=52	NA	rs1800373	0.55	0.55	0.526	0.538139	0.5477	0.7123	0.4769	0.5151	0.4233	0.54	0.71	0.44	0.48	0.5338	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.459475	1.459475	NA	0.538837	0.512256	NA	0.478	NA	4.7129964
1181	12	124172746	124172746	T	C	intronic	TCTN2	NA	NA	NA	intronic	ENSG00000168778	NA	NA	NA	NA	NA	12q24.31	NA	Name=JunD,NFKB,SRF,BCL11A,BATF	NA	NA	rs7302449	0.41	0.41	0.401	0.445487	0.4175	0.1498	0.3444	0.7481	0.4417	0.42	0.12	0.36	0.74	0.4269	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.334699	NA	NA	0.442791	0.716523	NA	0.29	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000114235.2;CLNDSDB=.;CLNDSDBID=.	4.712809
1181	2	28824303	28824303	C	G	intronic	PLB1	NA	NA	NA	intronic	ENSG00000163803	NA	NA	NA	NA	NA	2p23.2	NA	Name=CTCF	NA	NA	rs1106882	0.29	0.29	0.275	0.269369	0.2873	0.3978	0.232	0.1657	0.2853	0.3	0.39	0.22	0.21	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.867901	NA	NA	NA	NA	NA	0.304	NA	4.7127
1181	5	119016414	119016414	C	G	intergenic	FAM170A,PRR16	dist=44897;dist=783605	NA	NA	ncRNA_exonic	ENSG00000234259	NA	NA	NA	Score=528;Name=lod=186	NA	5q23.1	NA	NA	NA	NA	rs330203	0.42	0.42	0.415	0.421126	0.2873	0.506	0.2795	0.5779	0.3599	0.28	0.52	0.29	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.092253	NA	NA	NA	NA	NA	0.362	NA	4.7127
1181	8	124413714	124413714	G	A	intergenic	ATAD2,WDYHV1	dist=5009;dist=15251	NA	NA	ncRNA_exonic	ENSG00000254294	NA	NA	NA	Score=752;Name=lod=1515	NA	8q24.13	NA	NA	NA	NA	rs3824251	0.29	0.29	0.245	0.302516	0.2873	0.3581	0.3991	0.1293	0.4264	0.29	0.4	0.34	0.14	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.427963	NA	NA	NA	NA	NA	0.355	NA	4.7127
1181	1	17563967	17563967	T	C	intronic	PADI1	NA	NA	NA	intronic	ENSG00000142623	NA	NA	NA	NA	NA	1p36.13	NA	Name=Rad21,BAF170,GR,JunD,FOSL2,Ini1,p300_(N-15),CTCF,c-Fos,ERalpha_a,GTF2F1_(RAP-74),c-Jun,BAF155	Name=148	NA	rs2977306	0.45	0.45	0.412	0.484026	0.4225	0.4355	0.3991	0.5325	0.592	0.41	0.43	0.41	0.54	0.4396	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.813598	NA	NA	0.426163	0.511121	NA	0.42	NA	4.711737
1181	4	9555405	9555405	A	G	intergenic	DEFB131,MIR548I2	dist=103165;dist=2384	NA	NA	ncRNA_exonic	ENSG00000242034	NA	NA	NA	Score=700;Name=lod=934	NA	4p16.1	NA	NA	NA	NA	rs9997903	0.36	0.36	0.31	0.377396	0.2883	0.3075	0.3213	0.646	0.2178	0.3	0.3	0.27	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.120893	NA	NA	NA	NA	NA	0.196	NA	4.7117
1181	12	6979010	6979010	G	A	intronic	TPI1	NA	NA	NA	intronic	ENSG00000111669	NA	NA	NA	NA	NA	12p13.31	NA	NA	Name=11	NA	rs2071069	0.29	0.29	0.287	0.314896	0.2883	0.2054	0.2478	0.4365	0.3384	0.3	0.18	0.3	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.260328	NA	NA	NA	NA	NA	0.246	NA	4.7117
1181	15	34666060	34666060	C	T	intergenic	LPCAT4,GOLGA8A	dist=6665;dist=5210	NA	NA	ncRNA_exonic	ENSG00000259904,ENSG00000266205	NA	NA	NA	Score=848;Name=lod=3716	NA	15q14	NA	NA	NA	NA	rs4984215	0.26	0.26	0.281	0.251398	0.2883	0.2341	0.2061	0.2405	0.2781	0.28	0.22	0.25	0.28	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.841178	NA	NA	NA	NA	NA	0.275	NA	4.7117
1181	15	34666149	34666149	G	A	intergenic	LPCAT4,GOLGA8A	dist=6754;dist=5121	NA	NA	ncRNA_exonic	ENSG00000259904	NA	NA	NA	Score=848;Name=lod=3716	NA	15q14	NA	NA	NA	NA	rs4984217	0.26	0.26	0.275	0.251398	0.2883	0.2341	0.2061	0.2405	0.2781	0.28	0.22	0.25	0.28	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.06476	NA	NA	NA	NA	NA	0.275	NA	4.7117
1181	15	34666223	34666223	C	T	intergenic	LPCAT4,GOLGA8A	dist=6828;dist=5047	NA	NA	ncRNA_exonic	ENSG00000259904	NA	NA	NA	Score=848;Name=lod=3716	NA	15q14	NA	NA	NA	NA	rs4984218	0.24	0.24	0.258	0.229034	0.2883	0.2341	0.2003	0.1589	0.2781	0.28	0.22	0.24	0.21	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.030132	NA	NA	NA	NA	NA	0.261	NA	4.7117
1181	3	36211523	36211523	G	A	intergenic	ARPP21,STAC	dist=375535;dist=210574	NA	NA	ncRNA_exonic	ENSG00000236158	NA	NA	NA	Score=688;Name=lod=835	NA	3p22.3	NA	NA	NA	NA	rs11720944	0.42	0.42	0.406	0.430112	0.2893	0.5337	0.3343	0.5719	0.3446	0.29	0.51	0.3	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.36711	NA	NA	NA	NA	NA	0.326	NA	4.7107
1181	4	9565507	9565507	C	T	intergenic	MIR548I2,DRD5	dist=7570;dist=217751	NA	NA	ncRNA_exonic	ENSG00000244004	NA	NA	NA	Score=787;Name=lod=2103	NA	4p16.1	NA	NA	NA	NA	rs28408800	0.34	0.34	0.337	0.353834	0.2893	0.2966	0.3055	0.5726	0.2178	0.3	0.28	0.25	0.52	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.704754	NA	NA	NA	NA	NA	0.304	NA	4.7107
1181	8	4851787	4851787	C	G	intronic	CSMD1	NA	NA	NA	intronic	ENSG00000183117	NA	NA	NA	NA	NA	8p23.2	NA	NA	Name=4	NA	rs3860871	0.17	0.17	0.182	0.144169	0.2893	0.002	0.1715	0.1369	0.1319	0.29	0.0017	0.22	0.14	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.691869	1.691869	NA	NA	NA	NA	0.029	NA	4.7107
1181	8	128099242	128099242	C	A	intergenic	PCAT1,POU5F1B	dist=65983;dist=328615	NA	NA	ncRNA_exonic	ENSG00000224722	NA	NA	NA	Score=507;Name=lod=154	NA	8q24.21	NA	NA	NA	NA	rs13257371	0.29	0.29	0.248	0.343251	0.2893	0.3492	0.402	0.1891	0.5593	0.3	0.34	0.36	0.17	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.173176	2.173176	NA	NA	NA	NA	0.152	NA	4.7107
1181	9	33613927	33613927	G	T	intergenic	ANKRD18B,ANXA2P2	dist=40926;dist=10296	NA	NA	ncRNA_exonic	ENSG00000204982	NA	NA	NA	Score=523;Name=lod=178	NA	9p13.3	NA	NA	NA	NA	rs12346912	0.31	0.31	0.437	0.307907	0.2893	0.3631	0.2608	0.3434	0.2556	0.3	0.33	0.25	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.346138	NA	NA	NA	NA	NA	0.406	NA	4.7107
1181	11	36103442	36103442	C	G	intronic	LDLRAD3	NA	NA	NA	intronic	ENSG00000179241	NA	NA	NA	NA	NA	11p13	Score=675;Name=V$P53_01	NA	NA	NA	rs11033408	0.28	0.28	0.266	0.25599	0.2893	0.3522	0.3689	0.1392	0.2004	0.29	0.35	0.35	0.13	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.136483	NA	NA	NA	NA	NA	0.326	NA	4.7107
1181	21	47864813	47864813	C	T	intronic	PCNT	NA	NA	NA	intronic	ENSG00000160299	NA	NA	NA	NA	NA	21q22.3	NA	NA	Name=4	NA	rs2249970	0.28	0.28	0.25	0.279353	0.2893	0.376	0.3473	0.1664	0.274	0.28	0.34	0.33	0.18	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.242476	NA	NA	NA	NA	NA	0.239	NA	4.7107
1181	21	47864823	47864823	G	C	intronic	PCNT	NA	NA	NA	intronic	ENSG00000160299	NA	NA	NA	NA	NA	21q22.3	NA	NA	Name=4	NA	rs2073381	0.28	0.28	0.248	0.292732	0.2893	0.376	0.3473	0.1664	0.3425	0.28	0.34	0.33	0.18	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.299653	NA	NA	NA	NA	NA	0.239	NA	4.7107
1181	19	45855524	45855524	G	A	exonic	ERCC2	NA	synonymous SNV	ERCC2:NM_000400:exon22:c.C2133T:p.D711D	exonic	ENSG00000104884	NA	synonymous SNV	ENSG00000104884:ENST00000391944:exon20:c.C1899T:p.D633D,ENSG00000104884:ENST00000391941:exon21:c.C2061T:p.D687D,ENSG00000104884:ENST00000391945:exon22:c.C2133T:p.D711D	NA	NA	19q13.32	NA	NA	NA	NA	rs1052555	0.18	0.18	0.18	0.182308	0.337	0.0625	0.1527	0.0726	0.316	0.35	0.06	0.17	0.08	0.2859	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.028925	NA	NA	0.33314	0.113482	NA	0.188	NA	4.7106266
1181	2	113300283	113300283	C	G	intronic	POLR1B	NA	NA	NA	intronic	ENSG00000125630	NA	NA	NA	NA	NA	2q13	NA	Name=E2F1,E2F6,Sin3Ak-20,HA-E2F1,NRSF,HMGN3,Pol2(b),E2F6_(H-50),CHD2_(N-1250),Max,ZBTB7A_(SC-34508),c-Myc	NA	NA	rs2241804	0.19	0.19	0.163	0.204473	0.0755	0.3046	0.2147	0.2564	0.1564	0.08	0.31	0.17	0.23	0.1404	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.070612	NA	NA	0.073602	0.211503	NA	0.188	NA	4.710498
1181	17	6616527	6616527	G	A	intronic	SLC13A5	NA	NA	NA	intronic	ENSG00000141485	NA	NA	NA	NA	NA	17p13.1	NA	Name=Sin3Ak-20,HEY1	NA	NA	rs62621831	0.08	0.08	0.073	0.071885	0.0944	0.0615	0.0346	0.0923	0.0583	0.1	0.08	0.04	0.1	0.0922	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.227282	3.227282	NA	0.10328	0.092727	NA	0.094	NA	4.71012
1181	19	19446936	19446936	G	A	exonic	MAU2	NA	synonymous SNV	MAU2:NM_015329:exon3:c.G300A:p.P100P	exonic	ENSG00000129933	NA	synonymous SNV	ENSG00000129933:ENST00000262815:exon3:c.G300A:p.P100P,ENSG00000129933:ENST00000392313:exon3:c.G300A:p.P100P	Score=498;Name=lod=141	NA	19p13.11	NA	NA	NA	NA	rs769267	0.58	0.58	0.572	0.526158	0.6829	0.6677	0.5432	0.3464	0.4499	0.69	0.66	0.55	0.32	0.6074	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.233947	1.233947	NA	0.666264	0.396534	NA	0.5	NA	4.7101026
1181	1	47118168	47118168	C	T	intronic	ATPAF1	NA	NA	NA	intronic	ENSG00000123472	NA	NA	NA	NA	NA	1p33	NA	NA	Name=3	NA	rs2289447	0.22	0.22	0.192	0.189497	0.2903	0.1657	0.2867	0.0961	0.1677	0.28	0.16	0.31	0.14	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.858778	NA	NA	NA	NA	NA	0.152	NA	4.7097
1181	7	150444321	150444321	G	A	intergenic	GIMAP1-GIMAP5,TMEM176B	dist=3584;dist=44055	NA	NA	ncRNA_exonic	ENSG00000177590	NA	NA	NA	NA	NA	7q36.1	Score=798;Name=V$OLF1_01	NA	NA	NA	rs6952662	0.26	0.26	0.241	0.257388	0.2903	0.0883	0.2507	0.3888	0.2249	0.28	0.1	0.27	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.262213	NA	NA	NA	NA	NA	0.312	NA	4.7097
1181	9	20620596	20620596	C	T	intronic	MLLT3	NA	NA	NA	intronic	ENSG00000171843	NA	NA	NA	NA	NA	9p21.3	NA	NA	Name=99	NA	rs2780835	0.25	0.25	0.28	0.271166	0.2903	0.2014	0.1945	0.3457	0.2771	0.28	0.18	0.2	0.31	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.427719	3.427719	NA	NA	NA	NA	0.326	NA	4.7097
1181	9	33613986	33613986	C	A	intergenic	ANKRD18B,ANXA2P2	dist=40985;dist=10237	NA	NA	ncRNA_exonic	ENSG00000204982	NA	NA	NA	Score=476;Name=lod=115	NA	9p13.3	NA	NA	NA	NA	rs12346857	0.29	0.29	0.298	0.307907	0.2903	0.3631	0.2608	0.3427	0.2556	0.28	0.31	0.23	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.409304	NA	NA	NA	NA	ID=COSN168512;OCCURENCE=1(large_intestine)	0.413	NA	4.7097
1181	19	20879218	20879218	T	A	intergenic	ZNF626,ZNF85	dist=34816;dist=226841	NA	NA	ncRNA_exonic	ENSG00000269779	NA	NA	NA	Score=397;Name=lod=55	NA	19p12	NA	NA	NA	NA	rs2018561	0.4	0.4	0.401	0.419329	0.2903	0.371	0.4207	0.6641	0.2699	0.27	0.37	0.39	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.327808	NA	NA	NA	NA	NA	0.362	NA	4.7097
1181	19	58352522	58352522	G	A	exonic	ZNF587B	NA	synonymous SNV	ZNF587B:NM_001204818:exon3:c.G480A:p.R160R	exonic	ENSG00000269343	NA	synonymous SNV	ENSG00000269343:ENST00000316462:exon3:c.G477A:p.R159R,ENSG00000269343:ENST00000442832:exon3:c.G480A:p.R160R,ENSG00000269343:ENST00000594901:exon3:c.G480A:p.R160R,ENSG00000269343:ENST00000594328:exon4:c.G330A:p.R110R	NA	NA	19q13.43	NA	NA	NA	NA	rs12981244	0.58	0.58	0.574	0.572883	0.4622	0.6796	0.5634	0.7405	0.3569	0.47	0.67	0.52	0.71	0.4949	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.630926	NA	NA	NA	NA	NA	0.471	NA	4.7095666
1181	18	33282985	33282985	A	C	intronic	GALNT1	NA	NA	NA	intronic	ENSG00000141429	NA	NA	NA	NA	NA	18q12.2	NA	Name=c-Jun	NA	NA	rs9989616	0.09	0.09	0.071	0.0844649	0.0994	0.0258	0.2089	0.0953	0.0266	0.1	0.03	0.15	0.11	0.099	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.517708	NA	NA	0.092084	0.071266	NA	0.094	NA	4.709516
1181	5	78580156	78580156	A	G	intronic	JMY	NA	NA	NA	ncRNA_exonic	ENSG00000213757	NA	NA	NA	Score=815;Name=lod=2747	NA	5q14.1	NA	NA	NA	NA	rs4704551	0.52	0.52	0.485	0.480431	0.6243	0.4841	0.5562	0.3646	0.4315	0.63	0.46	0.53	0.42	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.763981	2.763981	NA	NA	NA	NA	0.572	NA	4.7090333
1181	12	93251903	93251903	C	A	intronic	EEA1	NA	NA	NA	ncRNA_exonic	ENSG00000258012	NA	NA	NA	Score=821;Name=lod=2881	NA	12q22	NA	NA	NA	NA	rs731799	0.7	0.7	0.679	0.705871	0.6243	0.9405	0.768	0.4977	0.7853	0.62	0.94	0.75	0.49	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.175573	NA	NA	NA	NA	NA	0.616	NA	4.7090333
1181	12	93252527	93252527	A	G	intronic	EEA1	NA	NA	NA	ncRNA_exonic	ENSG00000258012	NA	NA	NA	Score=821;Name=lod=2881	NA	12q22	NA	NA	NA	NA	rs2133299	0.69	0.69	0.662	0.703474	0.6243	0.9405	0.7666	0.4894	0.7853	0.62	0.94	0.75	0.48	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.167923	NA	NA	NA	NA	NA	0.616	NA	4.7090333
1181	12	93278060	93278060	C	T	intronic	EEA1	NA	NA	NA	ncRNA_exonic	ENSG00000257195	NA	NA	NA	Score=682;Name=lod=790	NA	12q22	NA	NA	NA	NA	rs1809871	0.69	0.69	0.637	0.701078	0.6243	0.9405	0.7666	0.4803	0.7853	0.62	0.94	0.75	0.48	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.585409	1.585409	NA	NA	NA	NA	0.587	NA	4.7090333
1181	12	93278423	93278423	A	G	intronic	EEA1	NA	NA	NA	ncRNA_exonic	ENSG00000257195	NA	NA	NA	Score=278;Name=lod=18	NA	12q22	NA	NA	NA	NA	rs10859387	0.7	0.7	0.649	0.703474	0.6243	0.9405	0.768	0.4887	0.7853	0.62	0.94	0.75	0.49	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.392665	NA	NA	NA	NA	NA	0.616	NA	4.7090333
1181	17	8464856	8464856	G	A	intronic	MYH10	NA	NA	NA	ncRNA_exonic	ENSG00000244604	NA	NA	NA	Score=705;Name=lod=979	NA	17p13.1	NA	NA	NA	NA	rs1845588	0.5	0.5	0.467	0.46885	0.6243	0.496	0.5375	0.2519	0.5256	0.62	0.51	0.6	0.25	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.298698	NA	NA	NA	NA	NA	0.464	NA	4.7090333
1181	5	76841666	76841666	A	G	intergenic	WDR41,OTP	dist=53334;dist=82871	NA	NA	ncRNA_exonic	ENSG00000244019	NA	NA	NA	Score=796;Name=lod=2299	NA	5q13.3	NA	NA	NA	NA	rs13164056	0.19	0.19	0.157	0.14976	0.2913	0.1042	0.2522	0.0431	0.1227	0.27	0.12	0.28	0.06	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.354979	NA	NA	NA	NA	NA	0.167	NA	4.7087
1181	6	32608991	32608991	A	G	intronic	HLA-DQA1	NA	NA	NA	intronic	ENSG00000196735	NA	NA	NA	NA	NA	6p21.32	NA	Name=Pol2-4H8	NA	NA	rs9272685	NA	NA	0.23	0.278554	0.2913	0.2302	0.3444	0.3298	0.1994	NA	NA	NA	NA	NA	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.49642	NA	NA	NA	NA	NA	0.043	NA	4.7087
1181	14	57863385	57863385	C	T	intronic	NAA30	NA	NA	NA	intronic	ENSG00000139977	NA	NA	NA	NA	NA	14q22.3	Score=742;Name=V$TCF11MAFG_01	NA	NA	NA	rs12894584	0.13	0.13	0.127	0.105631	0.2913	0.001	0.1542	0.0129	0.1135	0.29	NA	0.16	0.02	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.844618	NA	NA	NA	NA	NA	0.181	NA	4.7087
1181	18	6462642	6462642	C	G	intergenic	L3MBTL4,LOC100130480	dist=47732;dist=48773	NA	NA	ncRNA_exonic	ENSG00000235552	NA	NA	NA	Score=607;Name=lod=391	NA	18p11.31	NA	NA	NA	NA	rs3933539	0.3	0.3	0.269	0.295527	0.2913	0.4583	0.2925	0.1467	0.3354	0.28	0.44	0.31	0.15	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.538512	1.538512	NA	NA	NA	NA	0.29	NA	4.7087
1181	11	113264272	113264272	T	C	exonic	ANKK1	NA	synonymous SNV	ANKK1:NM_178510:exon2:c.T255C:p.S85S	exonic	ENSG00000170209	NA	synonymous SNV	ENSG00000170209:ENST00000303941:exon2:c.T255C:p.S85S	Score=313;Name=lod=25	NA	11q23.2	NA	NA	NA	NA	rs17115439	0.57	0.57	0.551	0.525958	0.675	0.5536	0.5692	0.3502	0.5511	0.68	0.58	0.58	0.39	0.6098	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.797922	NA	NA	0.673653	0.44713	NA	0.471	NA	4.7082136
1181	3	122290579	122290579	C	T	exonic	DTX3L	NA	synonymous SNV	DTX3L:NM_138287:exon5:c.C2208T:p.A736A	exonic	ENSG00000163840	NA	synonymous SNV	ENSG00000163840:ENST00000383661:exon4:c.C672T:p.A224A,ENSG00000163840:ENST00000296161:exon5:c.C2208T:p.A736A	NA	NA	3q21.1	NA	NA	NA	NA	rs2036342	0.32	0.32	0.315	0.34345	0.3211	0.4355	0.2622	0.2731	0.4243	0.32	0.41	0.3	0.25	0.3237	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.419031	NA	NA	0.313837	0.294144	NA	0.225	NA	4.7080296
1181	1	100182884	100182884	C	T	intronic	FRRS1	NA	NA	NA	intronic	ENSG00000156869	NA	NA	NA	NA	NA	1p21.2	NA	NA	Name=2	NA	rs6696586	0.36	0.36	0.375	0.407548	0.2922	0.3423	0.3501	0.5159	0.4877	0.31	0.33	0.31	0.53	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.618947	NA	NA	NA	NA	NA	0.355	NA	4.7078
1181	3	36211295	36211295	T	C	intergenic	ARPP21,STAC	dist=375307;dist=210802	NA	NA	ncRNA_exonic	ENSG00000236158	NA	NA	NA	Score=688;Name=lod=835	NA	3p22.3	NA	NA	NA	NA	rs35581048	0.42	0.42	0.398	0.43111	0.2922	0.5347	0.3357	0.5719	0.3446	0.29	0.51	0.3	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.02889	NA	NA	NA	NA	NA	0.304	NA	4.7078
1181	15	90273070	90273070	A	G	intronic	WDR93	NA	NA	NA	intronic	ENSG00000140527	NA	NA	NA	NA	NA	15q26.1	NA	NA	Name=2	NA	rs12148067	0.3	0.3	0.32	0.319688	0.2922	0.0863	0.2176	0.5893	0.2965	0.28	0.09	0.26	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.264693	1.264693	NA	NA	NA	NA	0.406	NA	4.7078
1181	1	3418391	3418391	C	T	exonic	MEGF6	NA	synonymous SNV	MEGF6:NM_001409:exon18:c.G2283A:p.P761P	exonic	ENSG00000162591	NA	synonymous SNV	ENSG00000162591:ENST00000294599:exon15:c.G1968A:p.P656P,ENSG00000162591:ENST00000356575:exon18:c.G2283A:p.P761P,ENSG00000162591:ENST00000485002:exon18:c.G2304A:p.P768P	NA	NA	1p36.32	NA	NA	NA	NA	rs4648508	0.3	0.3	0.291	0.286142	0.336	0.3056	0.2882	0.1914	0.3415	0.33	0.35	0.28	0.24	0.3124	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.886596	NA	NA	0.31054	0.188438	ID=COSM1342028;OCCURENCE=2(large_intestine)	0.138	NA	4.7077266
1181	17	37071189	37071189	C	T	intronic	LASP1	NA	NA	NA	intronic	ENSG00000002834	NA	NA	NA	NA	NA	17q12	NA	Name=USF-1	Name=14	NA	rs2241009	0.68	0.68	0.712	0.675319	0.6471	0.5913	0.5533	0.9138	0.5552	0.66	0.58	0.58	0.89	0.6455	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.397019	NA	NA	NA	NA	NA	0.775	NA	4.7074
1181	8	110420384	110420384	T	C	exonic	PKHD1L1	NA	synonymous SNV	PKHD1L1:NM_177531:exon18:c.T1920C:p.N640N	exonic	ENSG00000205038	NA	synonymous SNV	ENSG00000205038:ENST00000378402:exon18:c.T1920C:p.N640N	NA	NA	8q23.1	NA	NA	NA	NA	rs13254245	0.32	0.32	0.274	0.314097	0.3111	0.3929	0.4741	0.1551	0.3374	0.31	0.41	0.42	0.17	0.3301	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.337905	NA	NA	0.318226	0.188275	NA	0.297	NA	4.7072406
1181	5	31823032	31823032	T	C	intronic	PDZD2	NA	NA	NA	ncRNA_exonic	ENSG00000224282	NA	NA	NA	Score=669;Name=lod=696	NA	5p13.3	NA	NA	NA	NA	rs6869849	0.56	0.56	0.56	0.548922	0.6262	0.2728	0.6441	0.7216	0.453	0.62	0.31	0.66	0.68	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.785357	NA	NA	NA	NA	NA	0.58	NA	4.7071333
1181	12	19609503	19609503	A	G	intronic	AEBP2	NA	NA	NA	ncRNA_exonic	ENSG00000245205	NA	NA	NA	Score=785;Name=lod=2070	NA	12p12.3	NA	NA	NA	NA	rs10734689	0.48	0.48	0.456	0.445687	0.6262	0.494	0.389	0.2413	0.5266	0.61	0.53	0.4	0.26	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.809509	NA	NA	NA	NA	NA	0.486	NA	4.7071333
1181	16	47001626	47001626	G	A	intronic	DNAJA2	NA	NA	NA	intronic	ENSG00000069345	NA	NA	NA	NA	NA	16q12.1	NA	NA	Name=4	NA	rs2034598	0.2	0.2	0.195	0.172724	0.2932	0.1091	0.2104	0.0946	0.1933	0.3	0.12	0.23	0.1	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.358814	NA	NA	NA	NA	NA	0.181	NA	4.7068
1181	8	24359068	24359068	G	A	exonic	ADAM7	NA	synonymous SNV	ADAM7:NM_003817:exon20:c.G2187A:p.L729L	exonic	ENSG00000069206	NA	synonymous SNV	ENSG00000069206:ENST00000520720:exon14:c.G1503A:p.L501L,ENSG00000069206:ENST00000175238:exon20:c.G2187A:p.L729L,ENSG00000069206:ENST00000380789:exon20:c.G2187A:p.L729L	NA	NA	8p21.2	NA	NA	NA	NA	rs13277171	0.25	0.25	0.23	0.264776	0.3042	0.1885	0.428	0.1006	0.409	0.31	0.2	0.41	0.1	0.3235	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.20622	NA	NA	0.332326	0.126645	ID=COSM1456216;OCCURENCE=1(large_intestine)	0.174	NA	4.7066406
1181	22	30374920	30374920	C	T	intronic	MTMR3	NA	NA	NA	intronic	ENSG00000100330	NA	NA	NA	Score=675;Name=lod=740	NA	22q12.2	NA	NA	NA	NA	rs737907	0.1	0.1	0.094	0.104633	0.0924	0.0784	0.1081	0.1172	0.1247	0.1	0.08	0.09	0.12	0.1083	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.677785	NA	NA	0.092674	0.11212	NA	0.08	NA	4.706626
1181	12	95602569	95602569	A	G	intronic	FGD6	NA	NA	NA	intronic	ENSG00000180263	NA	NA	NA	NA	NA	12q22	NA	NA	Name=8	NA	rs11107934	0.14	0.14	0.115	0.128794	0.0775	0.2331	0.1571	0.0983	0.0951	0.08	0.24	0.16	0.1	0.119	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.023107	NA	NA	0.097326	0.095778	NA	0.094	NA	4.706174
1181	5	98169263	98169263	G	C	intergenic	RGMB,CHD1	dist=37065;dist=21645	NA	NA	ncRNA_exonic	ENSG00000250162	NA	NA	NA	Score=690;Name=lod=853	NA	5q15	NA	NA	NA	NA	rs331930	0.31	0.31	0.331	0.314896	0.2942	0.0962	0.2378	0.6029	0.227	0.28	0.11	0.27	0.62	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.180291	NA	NA	NA	NA	NA	0.37	NA	4.7058
1181	7	156426292	156426292	A	G	intergenic	LINC00244,C7orf13	dist=92497;dist=4768	NA	NA	ncRNA_exonic	ENSG00000234450	NA	NA	NA	Score=746;Name=lod=1438	NA	7q36.3	NA	NA	NA	NA	rs13237363	0.42	0.42	0.427	0.404153	0.2942	0.4792	0.2997	0.6309	0.2076	0.31	0.47	0.28	0.63	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.758778	NA	NA	NA	NA	NA	0.362	NA	4.7058
1181	16	72038363	72038363	T	C	intergenic	PKD1L3,DHODH	dist=4486;dist=4280	NA	NA	ncRNA_exonic	ENSG00000263311	NA	NA	NA	Score=646;Name=lod=561	NA	16q22.2	NA	NA	NA	NA	rs929866	0.49	0.49	0.444	0.480831	0.2942	0.7153	0.5749	0.5386	0.2863	0.28	0.7	0.53	0.52	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.267708	NA	NA	NA	NA	NA	0.362	NA	4.7058
1181	1	203743653	203743653	C	T	exonic	LAX1	NA	synonymous SNV	LAX1:NM_001136190:exon5:c.C993T:p.D331D,LAX1:NM_017773:exon5:c.C1041T:p.D347D	exonic	ENSG00000122188	NA	synonymous SNV	ENSG00000122188:ENST00000367217:exon5:c.C993T:p.D331D,ENSG00000122188:ENST00000442561:exon5:c.C1041T:p.D347D	NA	NA	1q32.1	NA	NA	NA	NA	rs3766748	0.27	0.27	0.265	0.285144	0.331	0.2321	0.1628	0.289	0.3742	0.32	0.25	0.19	0.27	0.3044	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.024044	NA	NA	0.325581	0.29369	NA	0.217	NA	4.7056856
1181	11	123813940	123813940	G	C	exonic	OR6T1	NA	synonymous SNV	OR6T1:NM_001005187:exon1:c.C606G:p.L202L	exonic	ENSG00000181499	NA	synonymous SNV	ENSG00000181499:ENST00000321252:exon1:c.C606G:p.L202L	NA	NA	11q24.1	NA	NA	NA	NA	rs7130003	0.26	0.26	0.248	0.263179	0.3181	0.3839	0.3199	0.0582	0.319	0.33	0.35	0.27	0.06	0.3097	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.848553	NA	NA	0.333217	0.109219	NA	0.312	NA	4.7056496
1181	1	165377552	165377552	G	A	exonic	RXRG	NA	synonymous SNV	RXRG:NM_001256571:exon7:c.C681T:p.V227V,RXRG:NM_006917:exon8:c.C1050T:p.V350V,RXRG:NM_001256570:exon9:c.C681T:p.V227V	exonic	ENSG00000143171	NA	synonymous SNV	ENSG00000143171:ENST00000359842:exon8:c.C1050T:p.V350V	Score=395;Name=lod=54	NA	1q23.3	NA	NA	NA	NA	rs2134095	0.53	0.53	0.487	0.478834	0.671	0.5079	0.6023	0.2284	0.502	0.68	0.51	0.62	0.23	0.6105	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.522951	NA	NA	0.679884	0.309578	NA	0.449	NA	4.7052826
1181	1	204946764	204946764	T	C	intronic	NFASC	NA	NA	NA	intronic	ENSG00000163531	NA	NA	NA	NA	NA	1q32.1	NA	Name=NFKB,TCF12	NA	NA	rs6663324	0.1	0.1	0.111	0.102037	0.0765	0.0139	0.0677	0.2262	0.0757	0.08	0.02	0.07	0.26	0.1012	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.098489	4.098489	NA	0.117113	0.238202	NA	0.196	NA	4.705187
1181	13	43788031	43788031	C	T	UTR3	ENOX1	NM_001242863:c.*95G>A,NM_017993:c.*95G>A,NM_001127615:c.*95G>A	NA	NA	UTR3	ENSG00000120658	ENST00000261488:c.*95G>A,ENST00000412891:c.*95G>A	NA	NA	NA	NA	13q14.11	NA	NA	Name=3	NA	rs1044753	0.48	0.48	0.456	0.453275	0.6282	0.5446	0.4654	0.152	0.5777	0.63	0.55	0.52	0.17	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.03387	NA	NA	NA	NA	NA	0.362	NA	4.7051334
1181	17	80535141	80535141	T	A	intronic	FOXK2	NA	NA	NA	ncRNA_exonic	ENSG00000265136	NA	NA	NA	Score=397;Name=lod=55	NA	17q25.3	NA	NA	NA	NA	rs12453001	0.63	0.63	0.597	0.644369	0.6282	0.7341	0.5937	0.4977	0.8027	0.63	0.73	0.58	0.53	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.307698	NA	NA	NA	NA	NA	0.616	NA	4.7051333
1182	11	123813823	123813823	G	A	exonic	OR6T1	NA	synonymous SNV	OR6T1:NM_001005187:exon1:c.C723T:p.C241C	exonic	ENSG00000181499	NA	synonymous SNV	ENSG00000181499:ENST00000321252:exon1:c.C723T:p.C241C	NA	NA	11q24.1	NA	NA	NA	NA	rs7129884	0.26	0.26	0.239	0.26278	0.3181	0.3839	0.3228	0.0552	0.319	0.33	0.35	0.27	0.05	0.3099	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.443614	NA	NA	0.333682	0.108084	NA	0.304	NA	4.7049846
1182	3	189884587	189884587	G	T	intergenic	LEPREL1,CLDN1	dist=44361;dist=138903	NA	NA	ncRNA_exonic	ENSG00000238077	NA	NA	NA	Score=619;Name=lod=436	NA	3q28	NA	NA	NA	NA	rs9831208	0.29	0.29	0.275	0.341454	0.2952	0.256	0.3343	0.323	0.5072	0.3	0.22	0.32	0.34	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.284967	NA	NA	NA	NA	NA	0.348	NA	4.7048
1182	3	189884801	189884801	C	T	intergenic	LEPREL1,CLDN1	dist=44575;dist=138689	NA	NA	ncRNA_exonic	ENSG00000238077	NA	NA	NA	Score=619;Name=lod=436	NA	3q28	NA	NA	NA	NA	rs9831273	0.29	0.29	0.264	0.341653	0.2952	0.256	0.3343	0.3238	0.5072	0.3	0.22	0.32	0.34	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.085619	NA	NA	NA	NA	NA	0.348	NA	4.7048
1182	13	99262567	99262567	G	A	intergenic	STK24,SLC15A1	dist=33171;dist=73488	NA	NA	ncRNA_exonic	ENSG00000217686	NA	NA	NA	Score=507;Name=lod=153	NA	13q32.2	NA	NA	NA	NA	rs4772108	0.28	0.28	0.263	0.2498	0.2952	0.374	0.2061	0.1399	0.2546	0.28	0.4	0.23	0.17	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.238114	NA	NA	NA	NA	ID=COSN164535;OCCURENCE=1(breast)	0.261	NA	4.7048
1182	14	106974665	106974665	G	A	intergenic	LINC00221,NONE	dist=23136;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000229092	NA	NA	NA	Score=410;Name=lod=62	NA	14q32.33	NA	NA	NA	NA	rs35455417	0.41	0.41	0.395	0.453474	0.2952	0.5089	0.3718	0.5371	0.5041	0.3	0.49	0.33	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.494059	NA	1	NA	NA	NA	0.362	NA	4.7048
1182	11	123814489	123814489	A	G	exonic	OR6T1	NA	synonymous SNV	OR6T1:NM_001005187:exon1:c.T57C:p.S19S	exonic	ENSG00000181499	NA	synonymous SNV	ENSG00000181499:ENST00000321252:exon1:c.T57C:p.S19S	NA	NA	11q24.1	NA	NA	NA	NA	rs4936859	0.26	0.26	0.238	0.262979	0.3181	0.3839	0.3228	0.056	0.319	0.33	0.35	0.27	0.05	0.3104	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.196063	NA	NA	0.333915	0.108084	NA	0.304	NA	4.7042516
1182	19	47585517	47585517	G	C	exonic	ZC3H4	NA	synonymous SNV	ZC3H4:NM_015168:exon10:c.C1254G:p.L418L	exonic	ENSG00000130749	NA	synonymous SNV	ENSG00000130749:ENST00000253048:exon10:c.C1254G:p.L418L	Score=552;Name=lod=234	NA	19q13.32	NA	NA	NA	NA	rs7250850	0.42	0.42	0.402	0.374601	0.6869	0.2758	0.5403	0.1006	0.408	0.69	0.26	0.53	0.1	0.5761	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.327424	1.327424	NA	0.69952	0.242872	NA	0.377	NA	4.7041466
1182	1	159272060	159272060	T	C	intronic	FCER1A	NA	NA	NA	intronic	ENSG00000179639	NA	NA	NA	NA	Name=IgE levels	1q23.2	NA	NA	NA	NA	rs2251746	0.15	0.15	0.138	0.149161	0.2962	0.0446	0.1441	0.0446	0.2505	0.29	0.04	0.16	0.06	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.645832	NA	NA	NA	NA	NA	0.123	NA	4.7038
1182	5	147302184	147302184	T	C	intergenic	C5orf46,SPINK5	dist=16083;dist=141351	NA	NA	ncRNA_exonic	ENSG00000250346	NA	NA	NA	Score=803;Name=lod=2447	NA	5q32	NA	NA	NA	NA	rs11168004	0.46	0.46	0.464	0.502596	0.2962	0.4663	0.3329	0.829	0.4315	0.3	0.45	0.34	0.8	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.047523	NA	NA	NA	NA	NA	0.464	NA	4.7038
1182	10	30980037	30980037	C	T	intergenic	LYZL2,ZNF438	dist=61390;dist=153528	NA	NA	ncRNA_exonic	ENSG00000234814	NA	NA	NA	NA	NA	10p11.23	NA	NA	Name=2	NA	rs11008184	0.24	0.24	0.223	0.24381	0.2962	0.2609	0.3386	0.0953	0.3057	0.3	0.24	0.31	0.11	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.428238	NA	NA	NA	NA	NA	0.21	NA	4.7038
1182	11	9983737	9983737	C	T	intronic	SBF2	NA	NA	NA	intronic	ENSG00000133812	NA	NA	NA	NA	NA	11p15.4	Score=865;Name=V$OCT1_02	NA	NA	NA	rs2403226	0.26	0.26	0.259	0.253195	0.2962	0.1865	0.3473	0.1899	0.2965	0.3	0.2	0.35	0.21	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.205472	NA	NA	NA	NA	NA	0.275	NA	4.7038
1182	17	81006286	81006286	G	A	intronic	B3GNTL1	NA	NA	NA	intronic	ENSG00000175711	NA	NA	NA	NA	NA	17q25.3	NA	Name=USF2,USF-1	NA	NA	rs10852789	0.3	0.3	0.295	0.285942	0.2962	0.3661	0.2709	0.2557	0.2444	0.28	0.39	0.28	0.24	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.129712	NA	NA	NA	NA	NA	0.283	NA	4.7038
1182	1	203743122	203743122	G	A	exonic	LAX1	NA	synonymous SNV	LAX1:NM_001136190:exon5:c.G462A:p.S154S,LAX1:NM_017773:exon5:c.G510A:p.S170S	exonic	ENSG00000122188	NA	synonymous SNV	ENSG00000122188:ENST00000367217:exon5:c.G462A:p.S154S,ENSG00000122188:ENST00000442561:exon5:c.G510A:p.S170S	NA	NA	1q32.1	NA	NA	NA	NA	rs3820194	0.27	0.27	0.286	0.294329	0.331	0.2321	0.1657	0.3222	0.3742	0.32	0.25	0.19	0.29	0.3066	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.108859	NA	NA	0.325581	0.316614	NA	0.217	NA	4.7034856
1182	18	11610163	11610163	G	C	intergenic	PIEZO2,GNAL	dist=461402;dist=78851	NA	NA	ncRNA_exonic	ENSG00000236396	NA	NA	NA	Score=536;Name=lod=202	NA	18p11.21	NA	NA	NA	NA	rs62084100	0.7	0.7	0.67	0.624401	0.6332	0.7222	0.7277	0.3805	0.771	0.72	0.77	0.77	0.53	0.6634	0.77	1	T	.	.	.	.	.	.	.	.	-0.695	N	.	.	-0.952	T	0.000	T	.	-2.57	0.003	.	-2.418	0.155	.	-2.570265	NA	NA	NA	NA	NA	0.377	NA	4.7034
1182	8	18257795	18257795	C	T	exonic	NAT2	NA	synonymous SNV	NAT2:NM_000015:exon2:c.C282T:p.Y94Y	exonic	ENSG00000156006	NA	synonymous SNV	ENSG00000156006:ENST00000286479:exon2:c.C282T:p.Y94Y	NA	NA	8p22	NA	NA	NA	NA	rs1041983	0.36	0.36	0.368	0.397364	0.3052	0.4395	0.2911	0.4682	0.4284	0.3	0.39	0.28	0.46	0.3449	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.664402	NA	NA	0.313605	0.442805	NA	0.399	NA	4.7029616
1182	15	34446955	34446955	C	T	intronic	KATNBL1	NA	NA	NA	intronic	ENSG00000134152	NA	NA	NA	NA	NA	15q14	NA	Name=KAP1,Pol2(b),SETDB1	NA	NA	rs77111922	0.1	0.1	0.093	0.0948482	0.1392	0.0268	0.0937	0.0741	0.1483	0.15	0.03	0.12	0.08	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.945085	NA	NA	0.157961	0.083333	NA	0.058	NA	4.702839
1182	6	75848376	75848376	C	T	intronic	COL12A1	NA	NA	NA	intronic	ENSG00000111799	NA	NA	NA	NA	NA	6q13	NA	NA	Name=2	NA	rs240737	0.38	0.38	0.402	0.389776	0.2972	0.3323	0.3256	0.587	0.3231	0.28	0.37	0.31	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.04375	NA	NA	NA	NA	NA	0.399	NA	4.7028
1182	10	30978433	30978433	A	G	intergenic	LYZL2,ZNF438	dist=59786;dist=155132	NA	NA	ncRNA_intronic	ENSG00000234814	NA	NA	NA	Score=595;Name=lod=349	NA	10p11.23	NA	NA	NA	NA	rs4747723	0.28	0.28	0.253	0.276957	0.2972	0.2609	0.3559	0.2103	0.3067	0.3	0.25	0.33	0.26	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.118129	NA	NA	NA	NA	NA	0.203	NA	4.7028
1182	16	56973335	56973335	A	G	intronic	HERPUD1	NA	NA	NA	intronic	ENSG00000051108	NA	NA	NA	NA	NA	16q13	NA	Name=Pol2	NA	NA	rs2133783	0.38	0.38	0.396	0.435304	0.2972	0.2192	0.3703	0.7504	0.4202	0.29	0.18	0.4	0.75	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.268344	NA	NA	NA	NA	NA	0.37	NA	4.7028
1182	6	29913001	29913001	T	C	intronic	HLA-A	NA	NA	NA	intronic	ENSG00000206503	NA	NA	NA	NA	NA	6p22.1	NA	Name=Pol2,Pol2-4H8	NA	NA	rs2735101	0.19	0.19	0.168	NA	NA	NA	NA	NA	NA	0.15	0.18	0.18	0.26	0.1553	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.863253	1.863253	NA	0.142093	0.205856	NA	0.087	NA	4.702607
1182	11	26677947	26677947	C	T	exonic	ANO3	NA	synonymous SNV	ANO3:NM_031418:exon26:c.C2682T:p.P894P	exonic	ENSG00000134343	NA	synonymous SNV	ENSG00000134343:ENST00000531568:exon23:c.C2244T:p.P748P,ENSG00000134343:ENST00000256737:exon26:c.C2682T:p.P894P,ENSG00000134343:ENST00000525139:exon26:c.C2634T:p.P878P,ENSG00000134343:ENST00000537978:exon27:c.C2634T:p.P878P	Score=575;Name=lod=289	NA	11p14.2	NA	NA	NA	NA	rs10835051	0.54	0.54	0.488	0.558506	0.666	0.5655	0.5519	0.3268	0.7587	0.68	0.53	0.54	0.32	0.6347	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.881102	NA	NA	0.663643	0.360872	NA	0.5	NA	4.7023236
1182	2	73597718	73597718	A	G	intergenic	EGR4,ALMS1	dist=76889;dist=15168	NA	NA	ncRNA_exonic	ENSG00000214484	NA	NA	NA	Score=798;Name=lod=2326	NA	2p13.1	NA	NA	NA	NA	rs1852644	0.43	0.43	0.424	0.44369	0.2982	0.2183	0.415	0.8759	0.2618	0.31	0.24	0.38	0.87	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.063671	NA	NA	NA	NA	NA	0.514	NA	4.7018
1182	5	2787786	2787786	T	G	intergenic	C5orf38,LOC285577	dist=32275;dist=629480	NA	NA	ncRNA_exonic	ENSG00000249541	NA	NA	NA	Score=536;Name=lod=201	NA	5p15.33	NA	NA	NA	NA	rs12332277	0.34	0.34	0.325	0.323682	0.2982	0.3988	0.4424	0.2474	0.2914	0.3	0.42	0.43	0.26	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.66935	NA	NA	NA	NA	NA	0.384	NA	4.7018
1182	5	2787860	2787860	C	T	intergenic	C5orf38,LOC285577	dist=32349;dist=629406	NA	NA	ncRNA_exonic	ENSG00000249541	NA	NA	NA	Score=536;Name=lod=201	NA	5p15.33	NA	NA	NA	NA	rs12332766	0.34	0.34	0.308	0.323682	0.2982	0.3988	0.4424	0.2474	0.2914	0.3	0.42	0.43	0.26	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.067497	NA	NA	NA	NA	NA	0.384	NA	4.7018
1182	5	2787993	2787993	A	G	intergenic	C5orf38,LOC285577	dist=32482;dist=629273	NA	NA	ncRNA_exonic	ENSG00000249541	NA	NA	NA	Score=295;Name=lod=21	NA	5p15.33	NA	NA	NA	NA	rs12332237	0.34	0.34	0.313	0.323682	0.2982	0.3988	0.4424	0.2474	0.2914	0.3	0.42	0.43	0.26	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.756029	NA	NA	NA	NA	NA	0.384	NA	4.7018
1182	5	2788230	2788230	A	G	intergenic	C5orf38,LOC285577	dist=32719;dist=629036	NA	NA	ncRNA_exonic	ENSG00000249541	NA	NA	NA	Score=510;Name=lod=158	NA	5p15.33	NA	NA	NA	NA	rs59235048	0.34	0.34	0.31	0.324081	0.2982	0.3988	0.4424	0.2489	0.2914	0.3	0.42	0.43	0.26	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.033801	NA	NA	NA	NA	NA	0.384	NA	4.7018
1182	6	89871759	89871759	G	A	intronic	PM20D2	NA	NA	NA	intronic	ENSG00000146281	NA	NA	NA	NA	NA	6q15	Score=860;Name=V$GATA1_02	NA	NA	NA	rs2297309	0.36	0.36	0.35	0.366613	0.2982	0.255	0.3862	0.5643	0.271	0.29	0.29	0.38	0.53	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.249825	NA	NA	NA	NA	NA	0.37	NA	4.7018
1182	7	128173720	128173720	A	G	intergenic	METTL2B,FLJ45340	dist=30742;dist=107575	NA	NA	ncRNA_exonic	ENSG00000242588	NA	NA	NA	Score=600;Name=lod=366	NA	7q32.1	NA	NA	NA	NA	rs62483278	0.33	0.33	0.268	0.300319	0.2982	0.3313	0.3804	0.177	0.3804	0.34	0.42	0.36	0.16	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.630302	2.630302	NA	NA	NA	ID=COSN168190;OCCURENCE=1(large_intestine)	0.203	NA	4.7018
1182	10	100157368	100157368	C	T	intronic	PYROXD2	NA	NA	NA	intronic	ENSG00000119943	NA	NA	NA	NA	NA	10q24.2	Score=984;Name=V$AP4_Q6	NA	NA	NA	rs10786418	0.38	0.38	0.371	0.391973	0.2982	0.4415	0.3559	0.4017	0.4499	0.31	0.46	0.34	0.43	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.009906	NA	NA	NA	NA	NA	0.239	NA	4.7018
1182	14	103440473	103440473	G	C	exonic	CDC42BPB	NA	synonymous SNV	CDC42BPB:NM_006035:exon12:c.C1521G:p.L507L	exonic	ENSG00000198752	NA	synonymous SNV	ENSG00000198752:ENST00000361246:exon12:c.C1521G:p.L507L	NA	NA	14q32.32	NA	NA	Name=5	NA	rs8009219	0.59	0.59	0.619	0.590855	0.659	0.5764	0.6758	0.4138	0.7147	0.65	0.64	0.65	0.39	0.6551	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.659609	NA	NA	0.651395	0.465048	NA	0.587	NA	4.7011716
1182	4	57222426	57222426	A	G	intronic	AASDH	NA	NA	NA	ncRNA_exonic	ENSG00000242083	NA	NA	NA	Score=776;Name=lod=1907	NA	4q12	NA	NA	NA	NA	rs4865090	0.62	0.62	0.599	0.647364	0.6322	0.5268	0.7406	0.6884	0.6656	0.63	0.51	0.71	0.68	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.092499	NA	NA	NA	NA	NA	0.63	NA	4.7011333
1182	7	47921682	47921682	A	T	exonic	PKD1L1	NA	synonymous SNV	PKD1L1:NM_138295:exon20:c.T3267A:p.A1089A	exonic	ENSG00000158683	NA	synonymous SNV	ENSG00000158683:ENST00000289672:exon20:c.T3267A:p.A1089A	NA	NA	7p12.3	NA	NA	NA	NA	rs10951936	0.28	0.28	0.236	0.247204	0.334	0.2242	0.3674	0.1914	0.1718	0.34	0.21	0.41	0.17	0.3007	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.458499	NA	NA	0.331047	0.209487	NA	0.377	NA	4.7009196
1182	1	160141285	160141285	C	T	intronic	ATP1A4	NA	NA	NA	intronic	ENSG00000132681	NA	NA	NA	NA	NA	1q23.2	NA	NA	Name=39	NA	rs669162	0.25	0.25	0.217	0.280551	0.2992	0.4167	0.3415	0.1747	0.2209	0.23	0.37	0.27	0.13	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.135853	NA	NA	NA	NA	ID=COSN163290;OCCURENCE=1(breast)	NA	NA	4.7008
1182	7	112125089	112125089	A	C	intronic	LSMEM1	NA	NA	NA	intronic	ENSG00000181016	NA	NA	NA	NA	NA	7q31.1	NA	Name=CEBPB,GR,Egr-1,STAT3	NA	NA	rs3095027	NA	NA	NA	0.172125	0.2992	0.0288	0.1758	0.2095	0.136	NA	NA	NA	NA	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.985557	NA	NA	NA	NA	NA	0.188	NA	4.7008
1182	19	9237435	9237435	A	G	exonic	OR7G3	NA	synonymous SNV	OR7G3:NM_001001958:exon1:c.T192C:p.S64S	exonic	ENSG00000170920	NA	synonymous SNV	ENSG00000170920:ENST00000305444:exon1:c.T192C:p.S64S	NA	NA	19p13.2	NA	NA	NA	NA	rs10407484	0.41	0.41	0.43	0.449081	0.3141	0.3651	0.2421	0.8041	0.3415	0.31	0.35	0.22	0.79	0.3427	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.891754	NA	NA	0.309186	0.699047	ID=COSM1129635;OCCURENCE=1(prostate)	0.377	NA	4.7006806
1182	19	53911510	53911510	G	A	exonic	ZNF765	NA	synonymous SNV	ZNF765:NM_001040185:exon4:c.G702A:p.Q234Q	exonic	ENSG00000196417	NA	synonymous SNV	ENSG00000196417:ENST00000396408:exon4:c.G702A:p.Q234Q	NA	NA	19q13.42	NA	NA	NA	NA	rs8182488	0.21	0.21	0.18	0.227636	0.3201	0.1042	0.3775	0.0522	0.3906	0.33	0.09	0.35	0.07	0.3158	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.449532	NA	NA	0.330386	0.095455	NA	0.188	NA	4.7003806
1182	4	56309992	56309992	A	G	exonic	CLOCK	NA	synonymous SNV	CLOCK:NM_004898:exon20:c.T1764C:p.N588N,CLOCK:NM_001267843:exon21:c.T1764C:p.N588N	exonic	ENSG00000134852	NA	synonymous SNV	ENSG00000134852:ENST00000309964:exon19:c.T1764C:p.N588N,ENSG00000134852:ENST00000513440:exon20:c.T1764C:p.N588N,ENSG00000134852:ENST00000381322:exon21:c.T1764C:p.N588N	Score=545;Name=lod=218	NA	4q12	NA	NA	NA	NA	rs3736544	0.7	0.7	0.714	0.723043	0.6501	0.6736	0.7147	0.7489	0.82	0.66	0.7	0.73	0.76	0.6958	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.936136	NA	NA	0.620698	0.732864	ID=COSM1131106;OCCURENCE=1(prostate)	0.775	NA	4.7000686
1182	5	79598589	79598589	G	T	intergenic	LOC644936,SPZ1	dist=2292;dist=17201	NA	NA	ncRNA_exonic	ENSG00000184188	NA	NA	NA	Score=693;Name=lod=872	NA	5q14.1	NA	NA	NA	NA	rs11738136	0.37	0.37	0.386	0.385184	0.3002	0.4246	0.3617	0.4387	0.3763	0.3	0.42	0.38	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.1961	NA	NA	NA	NA	NA	0.333	NA	4.6998
1182	8	85861290	85861290	A	T	intergenic	RALYL,LRRCC1	dist=27212;dist=158033	NA	NA	ncRNA_exonic	ENSG00000203413	NA	NA	NA	Score=814;Name=lod=2717	NA	8q21.2	NA	NA	NA	NA	rs12542468	0.37	0.37	0.355	0.355032	0.3002	0.6022	0.4308	0.1634	0.362	0.3	0.62	0.41	0.16	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.53352	NA	NA	NA	NA	NA	0.399	NA	4.6998
1182	9	14747157	14747157	A	C	intronic	FREM1	NA	NA	NA	intronic	ENSG00000164946	NA	NA	NA	NA	NA	9p22.3	Score=825;Name=V$FREAC4_01	NA	NA	NA	rs2270530	0.32	0.32	0.32	0.34345	0.3002	0.2778	0.3386	0.3865	0.4008	0.31	0.26	0.32	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.398398	1.398398	NA	NA	NA	NA	0.362	NA	4.6998
1182	14	107170062	107170062	A	G	intergenic	LINC00221,NONE	dist=218533;dist=NONE	NA	NA	exonic	ENSG00000211973	NA	nonsynonymous SNV	ENSG00000211973:ENST00000390633:exon2:c.T220C:p.F74L	NA	NA	14q32.33	NA	NA	Name=5	NA	rs55891010	0.4	0.4	0.359	0.446086	0.3748	0.4861	0.415	0.3321	0.6544	0.37	0.46	0.43	0.36	0.4246	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.91416	NA	0.28	0.334364	0.232091	NA	0.391	NA	4.6995694
1182	3	53769479	53769479	C	T	exonic	CACNA1D	NA	synonymous SNV	CACNA1D:NM_001128839:exon20:c.C2700T:p.S900S,CACNA1D:NM_001128840:exon20:c.C2700T:p.S900S,CACNA1D:NM_000720:exon21:c.C2760T:p.S920S	exonic	ENSG00000157388	NA	synonymous SNV	ENSG00000157388:ENST00000481478:exon15:c.C1779T:p.S593S,ENSG00000157388:ENST00000350061:exon20:c.C2700T:p.S900S,ENSG00000157388:ENST00000422281:exon20:c.C2700T:p.S900S,ENSG00000157388:ENST00000288139:exon21:c.C2760T:p.S920S	NA	NA	3p21.1	NA	NA	NA	NA	rs1045958	0.22	0.22	0.186	0.192292	0.3191	0.2153	0.3112	0.0159	0.1922	0.33	0.21	0.29	0.03	0.2994	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.579146	NA	NA	0.349186	0.069678	NA	0.181	NA	4.6989806
1182	1	110282972	110282972	G	T	UTR5	GSTM3	NM_000849:c.-63C>A	NA	NA	ncRNA_UTR5	ENSG00000134202	NA	NA	NA	NA	NA	1p13.3	NA	Name=Nrf1,TBP,HEY1,Max,Pol2(phosphoS2),SP1,Pol2,E2F6,Pol2-4H8,USF1_(SC-8983),HA-E2F1,E2F6_(H-50),TAF1	Name=137	NA	rs1332018	0.72	0.72	0.723	0.741414	0.5507	0.8611	0.6556	0.8638	0.7096	0.58	0.85	0.63	0.85	0.6759	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.016229	2.016229	NA	0.574481	0.820809	NA	0.725	NA	4.698919
1182	6	32608969	32608969	A	G	intronic	HLA-DQA1	NA	NA	NA	intronic	ENSG00000196735	NA	NA	NA	NA	NA	6p21.32	NA	Name=Pol2-4H8	NA	NA	rs9272683	0.27	0.27	0.134	0.299521	0.3012	0.253	0.379	0.3601	0.2076	0.26	0.21	0.34	0.32	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.445165	NA	NA	NA	NA	NA	0.051	NA	4.6988
1182	15	76075649	76075649	G	A	intergenic	MIR4313,UBE2Q2	dist=20993;dist=59973	NA	NA	ncRNA_exonic	ENSG00000187812	NA	NA	NA	Score=539;Name=lod=206	NA	15q24.2	NA	NA	NA	NA	rs34909574	0.24	0.24	0.171	0.230431	0.3012	0.2321	0.3559	0.0968	0.2474	0.32	0.2	0.32	0.1	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.254128	NA	NA	NA	NA	NA	0.21	NA	4.6988
1182	9	134021630	134021630	A	G	exonic	NUP214	NA	synonymous SNV	NUP214:NM_005085:exon13:c.A1884G:p.T628T	exonic	ENSG00000126883	NA	synonymous SNV	ENSG00000126883:ENST00000359428:exon13:c.A1884G:p.T628T,ENSG00000126883:ENST00000411637:exon13:c.A1851G:p.T617T,ENSG00000126883:ENST00000451030:exon13:c.A1884G:p.T628T	NA	NA	9q34.13	NA	NA	NA	NA	rs2296710	0.33	0.33	0.331	0.346446	0.3191	0.4276	0.2277	0.2821	0.4622	0.32	0.43	0.24	0.28	0.3309	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.799532	NA	NA	0.318023	0.271221	ID=COSM150730;OCCURENCE=1(stomach)	0.406	NA	4.6986436
1182	20	60927412	60927412	G	A	exonic	LAMA5	NA	synonymous SNV	LAMA5:NM_005560:exon4:c.C573T:p.S191S	exonic	ENSG00000130702	NA	synonymous SNV	ENSG00000130702:ENST00000252999:exon4:c.C573T:p.S191S,ENSG00000130702:ENST00000370677:exon4:c.C573T:p.S191S,ENSG00000130702:ENST00000370692:exon4:c.C573T:p.S191S	Score=503;Name=lod=148	NA	20q13.33	NA	NA	NA	NA	rs624313	0.57	0.57	0.523	0.51897	0.6581	0.7341	0.6369	0.1036	0.6319	0.67	0.77	0.61	0.16	0.636	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.021947	NA	NA	0.674161	0.206378	ID=COSM444176;OCCURENCE=1(breast),1(large_intestine)	0.42	NA	4.6984056
1182	4	190903938	190903938	C	T	intergenic	FRG1,LOC100288255	dist=19579;dist=41585	NA	NA	ncRNA_exonic	ENSG00000251297	NA	NA	NA	Score=847;Name=lod=3675	NA	4q35.2	NA	NA	NA	NA	rs2898750	NA	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3017	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.168173	NA	0.19	NA	NA	NA	0.138	NA	4.6983
1182	7	1012948	1012948	A	T	intronic	COX19	NA	NA	NA	intronic	ENSG00000240230	NA	NA	NA	NA	NA	7p22.3	NA	NA	Name=2	NA	rs56242247	0.14	0.14	0.157	0.166733	0.0795	0.004	0.0778	0.4281	0.1339	0.08	0.0017	0.08	0.41	0.1255	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.784432	NA	NA	0.097044	0.378974	NA	0.21	NA	4.697956
1182	1	65543255	65543255	A	G	intergenic	MIR101-1,AK4	dist=19064;dist=69977	NA	NA	ncRNA_exonic	ENSG00000235804	NA	NA	NA	Score=644;Name=lod=551	NA	1p31.3	NA	NA	NA	NA	rs11208580	0.56	0.56	0.555	0.578874	0.3022	0.6865	0.5058	0.9009	0.3691	0.29	0.68	0.49	0.89	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.16657	NA	NA	NA	NA	NA	0.601	NA	4.6978
1182	2	38044830	38044830	C	G	intergenic	CDC42EP3,RMDN2	dist=145152;dist=107632	NA	NA	ncRNA_exonic	ENSG00000225402	NA	NA	NA	Score=692;Name=lod=865	NA	2p22.2	NA	NA	NA	NA	rs4670218	0.34	0.34	0.326	0.334065	0.3022	0.3115	0.3372	0.3986	0.3006	0.3	0.34	0.31	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.076559	NA	NA	NA	NA	NA	0.283	NA	4.6978
1182	3	130546697	130546697	A	G	intergenic	PIK3R4,ATP2C1	dist=81001;dist=22672	NA	NA	ncRNA_exonic	ENSG00000232829	NA	NA	NA	Score=629;Name=lod=481	NA	3q22.1	NA	NA	NA	NA	rs12493504	0.25	0.25	0.242	0.24361	0.3022	0.3046	0.2608	0.112	0.2863	0.31	0.31	0.25	0.11	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.620571	NA	NA	NA	NA	NA	0.225	NA	4.6978
1182	4	109340680	109340680	C	T	intergenic	LEF1-AS1,RPL34-AS1	dist=243094;dist=118666	NA	NA	ncRNA_exonic	ENSG00000250485	NA	NA	NA	Score=762;Name=lod=1672	NA	4q25	NA	NA	NA	NA	rs219481	0.33	0.33	0.266	0.316294	0.3022	0.5278	0.4914	0.0499	0.3487	0.31	0.53	0.45	0.06	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.905849	1.905849	NA	NA	NA	NA	0.145	NA	4.6978
1182	6	132840197	132840197	T	A	intergenic	STX7,TAAR9	dist=5860;dist=19230	NA	NA	ncRNA_exonic	ENSG00000225343	NA	NA	NA	Score=696;Name=lod=895	NA	6q23.2	NA	NA	NA	NA	rs2840840	0.22	0.22	0.186	0.211661	0.3022	0.131	0.3401	0.1536	0.1892	0.29	0.13	0.36	0.11	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.17261	NA	NA	NA	NA	NA	NA	NA	4.6978
1182	9	98175644	98175644	T	G	intergenic	FANCC,PTCH1	dist=95653;dist=29620	NA	NA	ncRNA_exonic	ENSG00000213761	NA	NA	NA	Score=278;Name=lod=18	NA	9q22.32	NA	NA	NA	NA	rs17295814	0.14	0.14	0.129	0.11861	0.3022	0.0397	0.1354	0.0129	0.1421	0.3	0.03	0.15	0.02	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.965656	NA	NA	NA	NA	NA	0.159	NA	4.6978
1182	10	13199611	13199611	C	T	intergenic	OPTN,MCM10	dist=19335;dist=3943	NA	NA	ncRNA_exonic	ENSG00000203414	NA	NA	NA	Score=793;Name=lod=2221	NA	10p13	NA	NA	NA	NA	rs7899305	0.32	0.32	0.264	0.311302	0.3022	0.3502	0.4597	0.2708	0.2301	0.29	0.32	0.45	0.28	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.048786	NA	NA	NA	NA	NA	0.145	NA	4.6978
1182	10	52070902	52070902	G	C	intronic	SGMS1	NA	NA	NA	intronic	ENSG00000198964	NA	NA	NA	NA	NA	10q11.23	NA	Name=eGFP-GATA2,CTCF	NA	NA	rs7913957	0.22	0.22	0.186	0.170327	0.3022	0.1121	0.2536	0.0908	0.1431	0.31	0.14	0.29	0.1	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.413098	NA	NA	NA	NA	NA	0.196	NA	4.6978
1182	10	77029174	77029174	A	G	intergenic	COMTD1,ZNF503-AS1	dist=33404;dist=26967	NA	NA	ncRNA_exonic	ENSG00000227271	NA	NA	NA	Score=573;Name=lod=283	NA	10q22.2	NA	NA	NA	NA	rs10509357	0.35	0.35	0.377	0.397364	0.3022	0.2133	0.2637	0.6475	0.4417	0.28	0.2	0.27	0.68	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.079943	2.079943	NA	NA	NA	NA	0.406	NA	4.6978
1182	15	76183191	76183191	T	A	intronic	UBE2Q2	NA	NA	NA	intronic	ENSG00000140367	NA	NA	NA	NA	NA	15q24.2	NA	NA	Name=21	NA	rs62028936	0.2	0.2	0.176	0.180312	0.3022	0.2331	0.1628	0.0469	0.1933	0.32	0.19	0.16	0.05	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.249858	2.249858	NA	NA	NA	ID=COSN164998;OCCURENCE=1(NS)	0.232	NA	4.6978
1182	17	1686563	1686563	C	T	intronic	SMYD4	NA	NA	NA	intronic	ENSG00000186532	NA	NA	NA	NA	NA	17p13.3	NA	NA	Name=20	NA	rs11078639	0.29	0.29	0.254	0.294529	0.3022	0.4008	0.3487	0.1135	0.3834	0.32	0.38	0.3	0.13	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.72966	NA	NA	NA	NA	NA	0.225	NA	4.6978
1182	10	20436838	20436838	G	C	intronic	PLXDC2	NA	NA	NA	intronic	ENSG00000120594	NA	NA	NA	Score=567;Name=lod=268	NA	10p12.31	NA	NA	Name=5	NA	rs4626974	0.22	0.22	0.191	0.16873	0.4881	0.001	0.2752	0.0242	0.1329	0.46	NA	0.3	0.04	0.3355	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.915509	NA	NA	0.478953	0.100999	NA	0.355	NA	4.697447
1182	9	130984755	130984755	C	T	exonic	DNM1	NA	unknown	UNKNOWN	exonic	ENSG00000106976	NA	synonymous SNV	ENSG00000106976:ENST00000341179:exon8:c.C1008T:p.F336F,ENSG00000106976:ENST00000372923:exon8:c.C1008T:p.F336F,ENSG00000106976:ENST00000393594:exon8:c.C1008T:p.F336F,ENSG00000106976:ENST00000475805:exon8:c.C1008T:p.F336F,ENSG00000106976:ENST00000486160:exon8:c.C1008T:p.F336F	Score=528;Name=lod=187	NA	9q34.11	NA	NA	NA	NA	rs3003609	0.47	0.47	0.434	0.454673	0.5616	0.6121	0.6326	0.056	0.5951	0.56	0.6	0.59	0.08	0.5325	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.102829	NA	NA	0.542093	0.13527	NA	0.442	NA	4.6971403
1182	3	149050925	149050925	T	C	intronic	TM4SF18	NA	NA	NA	ncRNA_intronic	ENSG00000244468	NA	NA	NA	NA	NA	3q25.1	NA	NA	Name=49	NA	rs1526786	0.58	0.58	0.54	0.566094	0.6362	0.4881	0.7061	0.4334	0.6544	0.63	0.51	0.73	0.45	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.092902	NA	NA	NA	NA	NA	0.616	NA	4.6971333
1182	13	94047500	94047500	C	T	intronic	GPC6	NA	NA	NA	ncRNA_exonic	ENSG00000235784	NA	NA	NA	Score=676;Name=lod=745	NA	13q31.3	NA	NA	NA	NA	rs2762114	0.37	0.37	0.339	0.350839	0.6362	0.0665	0.4107	0.2421	0.455	0.65	0.06	0.46	0.25	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.008882	NA	NA	NA	NA	NA	0.471	NA	4.6971333
1182	2	89278489	89278489	A	C	intergenic	MIR4436A,NONE	dist=166521;dist=NONE	NA	NA	exonic	ENSG00000243063	NA	synonymous SNV	ENSG00000243063:ENST00000390247:exon1:c.T15G:p.A5A	Score=371;Name=lod=43	NA	2p11.2	NA	NA	NA	NA	rs6712880	0.31	0.31	0.336	0.399561	0.2455	0.4087	0.3559	0.5696	0.3497	0.17	0.39	0.28	0.45	0.3068	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.136381	NA	NA	0.250672	0.479792	ID=COSN395707,COSN166172;OCCURENCE=1(breast),1(lung)	0.065	NA	4.697028
1182	2	30748373	30748373	T	G	intronic	LCLAT1	NA	NA	NA	intronic	ENSG00000172954	NA	NA	NA	NA	NA	2p23.1	Score=812;Name=V$CDP_02	NA	NA	NA	rs13429099	0.18	0.18	0.174	0.154752	0.3032	0.0079	0.196	0.1679	0.1063	0.29	0.01	0.23	0.17	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.256424	NA	NA	NA	NA	NA	0.145	NA	4.6968
1182	7	129950879	129950879	G	A	intronic	CPA4	NA	NA	NA	intronic	ENSG00000128510	NA	NA	NA	NA	NA	7q32.2	NA	Name=CTCF	NA	NA	rs901800	0.28	0.28	0.265	0.273562	0.3032	0.3611	0.2493	0.152	0.3344	0.29	0.38	0.27	0.17	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.025675	NA	NA	NA	NA	NA	0.312	NA	4.6968
1182	15	76075943	76075943	C	A	intergenic	MIR4313,UBE2Q2	dist=21287;dist=59679	NA	NA	ncRNA_intronic	ENSG00000187812	NA	NA	NA	Score=444;Name=lod=85	NA	15q24.2	NA	NA	NA	NA	rs11852472	0.25	0.25	0.187	0.246206	0.3032	0.2321	0.3617	0.1452	0.2566	0.32	0.2	0.33	0.14	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.013805	NA	NA	NA	NA	ID=COSN164997;OCCURENCE=1(NS)	0.283	NA	4.6968
1182	7	75659815	75659815	T	C	exonic	STYXL1	NA	synonymous SNV	STYXL1:NM_016086:exon2:c.A27G:p.P9P	exonic	ENSG00000127952	NA	synonymous SNV	ENSG00000127952:ENST00000248600:exon2:c.A27G:p.P9P,ENSG00000127952:ENST00000340062:exon2:c.A27G:p.P9P,ENSG00000127952:ENST00000359697:exon2:c.A27G:p.P9P,ENSG00000127952:ENST00000360591:exon2:c.A27G:p.P9P,ENSG00000127952:ENST00000431581:exon2:c.A27G:p.P9P,ENSG00000127952:ENST00000451157:exon2:c.A27G:p.P9P	Score=552;Name=lod=234	NA	7q11.23	NA	NA	NA	NA	rs1044483	0.48	0.48	0.446	0.465056	0.673	0.3929	0.5836	0.2337	0.5542	0.67	0.38	0.59	0.24	0.5993	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.858071	NA	NA	0.698023	0.322288	NA	0.399	NA	4.6963436
1182	17	55187558	55187558	C	G	intronic	AKAP1	NA	NA	NA	intronic	ENSG00000121057	NA	NA	NA	NA	NA	17q22	NA	Name=CTCF	NA	NA	rs72828911	0.06	0.06	0.047	0.0593051	0.1143	0.005	0.0476	0.0575	0.0695	0.11	0.01	0.04	0.04	0.0881	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.139989	NA	NA	0.101512	0.061961	NA	0.174	NA	4.696088
1182	7	100877456	100877456	T	C	intronic	CLDN15	NA	NA	NA	intronic	ENSG00000106404	NA	NA	NA	NA	NA	7q22.1	NA	Name=NRSF,GABP,ETS1,TAF1,GATA-1,GATA2_(CG2-96),SRF,ZBTB7A_(SC-34508),Pol2-4H8,GATA-2,TAL1_(SC-12984),Pol2(b)	NA	NA	rs2302428	0.32	0.32	0.332	0.365016	0.3042	0.1696	0.2637	0.5817	0.408	0.29	0.16	0.29	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.008584	NA	NA	NA	NA	NA	0.449	NA	4.6958
1182	8	144408616	144408616	G	A	intronic	TOP1MT	NA	NA	NA	intronic	ENSG00000184428	NA	NA	NA	Score=346;Name=lod=34	NA	8q24.3	NA	NA	NA	NA	rs3829019	0.28	0.28	0.305	0.289137	0.3042	0.0794	0.196	0.5514	0.2014	0.3	0.07	0.21	0.56	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.919929	NA	NA	NA	NA	NA	0.333	NA	4.6958
1182	10	62539788	62539788	C	G	intronic	CDK1	NA	NA	NA	intronic	ENSG00000170312	NA	NA	NA	NA	NA	10q21.2	NA	NA	Name=6	NA	rs2260179	0.37	0.37	0.361	0.365415	0.3042	0.6141	0.415	0.2156	0.3395	0.29	0.59	0.39	0.24	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.271395	NA	NA	NA	NA	NA	0.413	NA	4.6958
1182	22	19969696	19969696	C	T	intronic	ARVCF	NA	NA	NA	intronic	ENSG00000099889	NA	NA	NA	NA	NA	22q11.21	NA	Name=ERalpha_a	NA	NA	rs2240716	0.25	0.25	0.232	0.258187	0.3042	0.2183	0.281	0.1513	0.3804	0.32	0.22	0.27	0.14	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.236451	NA	NA	NA	NA	NA	0.348	NA	4.6958
1182	21	47711229	47711229	A	G	intronic	YBEY	NA	NA	NA	intronic	ENSG00000182362	NA	NA	NA	NA	NA	21q22.3	NA	Name=PU.1,FOXA2_(SC-6554)	Name=11	NA	rs2276257	0.37	0.37	0.322	0.357428	0.4245	0.3185	0.5	0.2663	0.3507	0.42	0.29	0.5	0.29	0.4241	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.751448	NA	NA	0.456163	0.304812	NA	0.239	NA	4.695237
1183	7	100776931	100776931	G	A	intronic	SERPINE1	NA	NA	NA	intronic	ENSG00000106366	NA	NA	NA	NA	NA	7q22.1	NA	Name=Pol2	Name=93	NA	rs2227684	0.43	0.43	0.456	0.428514	0.4463	0.4554	0.2911	0.4879	0.3998	0.45	0.47	0.33	0.44	0.4195	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.087305	NA	NA	0.439302	0.490241	NA	0.507	NA	4.694898
1183	19	4512514	4512514	G	C	exonic	PLIN4	NA	synonymous SNV	PLIN4:NM_001080400:exon3:c.C1416G:p.G472G	exonic	ENSG00000167676	NA	synonymous SNV	ENSG00000167676:ENST00000301286:exon3:c.C1416G:p.G472G	NA	NA	19p13.3	NA	NA	NA	NA	rs7259625	0.31	0.31	0.339	0.358826	0.33	0.1032	0.2305	0.6657	0.3282	0.32	0.09	0.23	0.61	0.3206	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00155	NA	NA	0.321222	0.58819	NA	0.268	NA	4.6948446
1183	3	36211343	36211343	G	C	intergenic	ARPP21,STAC	dist=375355;dist=210754	NA	NA	ncRNA_exonic	ENSG00000236158	NA	NA	NA	Score=688;Name=lod=835	NA	3p22.3	NA	NA	NA	NA	rs7623430	0.52	0.52	0.533	0.553115	0.3052	0.629	0.3718	0.9206	0.362	0.31	0.62	0.35	0.87	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.03927	NA	NA	NA	NA	NA	0.42	NA	4.6948
1183	3	161043571	161043571	A	G	intergenic	NMD3,SPTSSB	dist=73776;dist=19009	NA	NA	ncRNA_exonic	ENSG00000240138	NA	NA	NA	Score=807;Name=lod=2543	NA	3q26.1	NA	NA	NA	NA	rs16832082	0.37	0.37	0.341	0.35643	0.3052	0.5308	0.3458	0.2708	0.3528	0.31	0.54	0.35	0.28	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.091452	NA	NA	NA	NA	NA	0.225	NA	4.6948
1183	19	9193913	9193913	A	G	intergenic	MUC16,OR1M1	dist=101895;dist=10008	NA	NA	ncRNA_exonic	ENSG00000267154	NA	NA	NA	Score=407;Name=lod=60	NA	19p13.2	NA	NA	NA	NA	rs2591615	0.26	0.26	0.224	0.284545	0.3052	0.1964	0.4236	0.2572	0.2924	0.28	0.16	0.41	0.22	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.488021	NA	NA	NA	NA	NA	0.254	NA	4.6948
1183	22	41470522	41470522	G	A	intergenic	RBX1,MIR1281	dist=101503;dist=17995	NA	NA	ncRNA_exonic	ENSG00000213857	NA	NA	NA	Score=867;Name=lod=4456	NA	22q13.2	NA	NA	NA	NA	rs8136923	0.24	0.24	0.171	0.250799	0.3052	0.0536	0.5346	0.1331	0.3558	0.31	0.06	0.52	0.13	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.01974	NA	NA	NA	NA	NA	0.297	NA	4.6948
1183	19	11221457	11221457	G	C	intronic	LDLR	NA	NA	NA	intronic	ENSG00000130164	NA	NA	NA	NA	NA	19p13.2	NA	Name=Pol2-4H8,Pol2(b),Pol2	Name=3	NA	rs12710260	0.28	0.28	0.221	0.276957	0.4592	0.1825	0.4683	0.031	0.3834	0.46	0.15	0.45	0.04	0.3849	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.023697	NA	NA	0.461395	0.096232	NA	0.297	NA	4.694505
1183	1	179558051	179558051	A	G	intergenic	NPHS2,TDRD5	dist=12967;dist=2697	NA	NA	ncRNA_exonic	ENSG00000227141	NA	NA	NA	Score=579;Name=lod=302	NA	1q25.2	NA	NA	NA	NA	rs744446	0.3	0.3	0.232	0.284145	0.3062	0.379	0.3646	0.0832	0.3783	0.3	0.42	0.38	0.09	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.125494	NA	NA	NA	NA	NA	0.304	NA	4.6938
1183	7	46037581	46037581	G	C	intergenic	IGFBP3,TNS3	dist=76710;dist=1277171	NA	NA	ncRNA_exonic	ENSG00000233952	NA	NA	NA	Score=578;Name=lod=297	NA	7p12.3	NA	NA	NA	NA	rs885062	0.25	0.25	0.236	0.267971	0.3062	0.1726	0.2363	0.2648	0.3538	0.3	0.18	0.26	0.25	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.794178	NA	NA	NA	NA	NA	0.304	NA	4.6938
1183	10	13199089	13199089	G	A	intergenic	OPTN,MCM10	dist=18813;dist=4465	NA	NA	ncRNA_exonic	ENSG00000203414	NA	NA	NA	Score=793;Name=lod=2221	NA	10p13	NA	NA	NA	NA	rs11258224	0.35	0.35	0.326	0.381989	0.3062	0.3839	0.5043	0.4539	0.274	0.28	0.33	0.45	0.42	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.134552	NA	NA	NA	NA	NA	0.232	NA	4.6938
1183	14	77639946	77639946	G	C	intergenic	ZDHHC22,TMEM63C	dist=31812;dist=8156	NA	NA	ncRNA_exonic	ENSG00000258552	NA	NA	NA	Score=309;Name=lod=24	NA	14q24.3	NA	NA	NA	NA	rs72725310	0.22	0.22	0.17	0.189297	0.3062	0.1111	0.3977	0.0598	0.1769	0.3	0.13	0.38	0.08	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.178176	NA	NA	NA	NA	NA	0.159	NA	4.6938
1183	17	21544599	21544599	A	G	intergenic	C17orf51,FAM27L	dist=89658;dist=280771	NA	NA	ncRNA_exonic	ENSG00000265019	NA	NA	NA	Score=626;Name=lod=468	NA	17p11.2	NA	NA	NA	NA	rs9912297	NA	NA	0.162	0.248802	0.3062	0.3125	0.2824	0.1362	0.2526	NA	NA	NA	NA	NA	0.054	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.112904	NA	NA	NA	NA	NA	0.058	NA	4.6938
1183	19	312020	312020	A	G	intronic	MIER2	NA	NA	NA	intronic	ENSG00000105556	NA	NA	NA	NA	NA	19p13.3	NA	NA	Name=9	NA	rs8104600	0.32	0.32	0.159	0.420327	0.3062	0.6716	0.3862	0.2413	0.545	0.25	0.59	0.3	0.12	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.119276	NA	NA	NA	NA	NA	NA	NA	4.6938
1183	2	113306827	113306827	A	G	intronic	POLR1B	NA	NA	NA	intronic	ENSG00000125630	NA	NA	NA	NA	NA	2q13	NA	Name=FOXA2_(SC-6554),FOXA1_(SC-101058),FOXA1_(C-20)	NA	NA	rs62158585	0.2	0.2	0.175	0.210064	0.0865	0.3046	0.2277	0.261	0.1585	0.09	0.31	0.19	0.25	0.1367	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.975621	NA	NA	0.083837	0.238538	ID=COSN166255;OCCURENCE=1(breast)	0.203	NA	4.692963
1183	22	47057191	47057191	C	T	intronic	GRAMD4	NA	NA	NA	intronic	ENSG00000075240	NA	NA	NA	NA	NA	22q13.31	NA	NA	Name=4	NA	rs2076707	0.33	0.33	0.324	0.292332	0.3072	0.3998	0.3573	0.2398	0.1912	0.29	0.4	0.38	0.25	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.740025	NA	NA	NA	NA	NA	0.29	NA	4.6928
1183	1	228433217	228433217	A	G	exonic	OBSCN	NA	synonymous SNV	OBSCN:NM_001098623:exon12:c.A3585G:p.T1195T,OBSCN:NM_052843:exon12:c.A3585G:p.T1195T,OBSCN:NM_001271223:exon13:c.A3861G:p.T1287T	exonic	ENSG00000154358	NA	synonymous SNV	ENSG00000154358:ENST00000284548:exon12:c.A3585G:p.T1195T,ENSG00000154358:ENST00000422127:exon12:c.A3585G:p.T1195T,ENSG00000154358:ENST00000570156:exon13:c.A3861G:p.T1287T	NA	NA	1q42.13	Score=814;Name=V$HTF_01	NA	NA	NA	rs2487384	0.62	0.62	0.582	0.616613	0.6412	0.5992	0.6542	0.7095	0.4571	0.63	0.59	0.64	0.64	0.6502	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.980183	NA	NA	0.682523	0.731473	NA	0.609	NA	4.6927436
1183	1	205238530	205238530	C	T	exonic	TMCC2	NA	synonymous SNV	TMCC2:NM_001242925:exon3:c.C966T:p.G322G,TMCC2:NM_014858:exon3:c.C1200T:p.G400G	exonic	ENSG00000133069	NA	synonymous SNV	ENSG00000133069:ENST00000329800:exon2:c.C480T:p.G160G,ENSG00000133069:ENST00000330675:exon2:c.C525T:p.G175G,ENSG00000133069:ENST00000358024:exon3:c.C1200T:p.G400G,ENSG00000133069:ENST00000367159:exon3:c.C612T:p.G204G,ENSG00000133069:ENST00000545499:exon3:c.C966T:p.G322G	NA	NA	1q32.1	NA	NA	NA	NA	rs1779411	0.18	0.18	0.179	0.125799	0.3549	0.0377	0.1816	0.0287	0.0726	0.36	0.03	0.23	0.03	0.2671	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.403851	NA	NA	0.352688	0.074807	NA	0.319	NA	4.6919786
1183	1	144915624	144915624	G	A	exonic	PDE4DIP	NA	synonymous SNV	PDE4DIP:NM_001002811:exon10:c.C2290T:p.L764L,PDE4DIP:NM_001002812:exon14:c.C1801T:p.L601L,PDE4DIP:NM_001198834:exon14:c.C1801T:p.L601L,PDE4DIP:NM_014644:exon14:c.C1801T:p.L601L,PDE4DIP:NM_001198832:exon17:c.C1999T:p.L667L	exonic	ENSG00000178104	NA	synonymous SNV	ENSG00000178104:ENST00000313431:exon10:c.C2290T:p.L764L,ENSG00000178104:ENST00000479408:exon10:c.C1162T:p.L388L,ENSG00000178104:ENST00000529945:exon10:c.C2290T:p.L764L,ENSG00000178104:ENST00000369349:exon14:c.C1801T:p.L601L,ENSG00000178104:ENST00000369351:exon14:c.C1801T:p.L601L,ENSG00000178104:ENST00000369354:exon14:c.C1801T:p.L601L,ENSG00000178104:ENST00000369356:exon14:c.C1801T:p.L601L,ENSG00000178104:ENST00000313382:exon17:c.C1999T:p.L667L,ENSG00000178104:ENST00000369359:exon17:c.C2212T:p.L738L,ENSG00000178104:ENST00000530740:exon17:c.C2212T:p.L738L	NA	NA	1q21.1	NA	NA	NA	NA	rs1778112	0.37	0.37	0.386	0.457268	0.4761	0.3621	0.4625	0.5	0.4744	0.4	0.28	0.42	0.38	0.4987	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.766182	NA	NA	NA	NA	NA	0.362	NA	4.6918666
1183	6	141243814	141243814	T	A	intergenic	MIR4465,NMBR	dist=238794;dist=1152931	NA	NA	ncRNA_exonic	ENSG00000216548	NA	NA	NA	Score=717;Name=lod=1089	NA	6q24.1	NA	NA	NA	NA	rs9495864	0.26	0.26	0.227	0.236821	0.3082	0.2927	0.3228	0.0673	0.274	0.3	0.28	0.36	0.09	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.26461	NA	NA	NA	NA	NA	0.152	NA	4.6918
1183	11	123880581	123880581	T	C	intergenic	OR10S1,OR10G4	dist=32183;dist=5701	NA	NA	ncRNA_exonic	ENSG00000226461	NA	NA	NA	Score=361;Name=lod=39	NA	11q24.1	NA	NA	NA	NA	rs17760637	0.26	0.26	0.232	0.257188	0.3082	0.3651	0.3156	0.0734	0.3006	0.32	0.35	0.26	0.08	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.511238	NA	1	NA	NA	NA	0.304	NA	4.6918
1183	2	33952621	33952621	G	A	ncRNA_exonic	MYADML	NA	NA	NA	ncRNA_exonic	ENSG00000239649	NA	NA	NA	Score=317;Name=lod=26	NA	2p22.3	NA	NA	NA	NA	rs11684598	0.44	0.44	0.413	0.444888	0.4761	0.4425	0.5951	0.3366	0.455	0.47	0.49	0.57	0.25	0.499	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.271999	NA	NA	NA	NA	NA	0.377	NA	4.6915666
1183	16	58757668	58757668	A	C	exonic	GOT2	NA	synonymous SNV	GOT2:NM_002080:exon2:c.T228G:p.V76V	exonic	ENSG00000125166	NA	synonymous SNV	ENSG00000125166:ENST00000245206:exon2:c.T228G:p.V76V,ENSG00000125166:ENST00000434819:exon2:c.T228G:p.V76V	Score=704;Name=lod=964	NA	16q21	NA	NA	NA	NA	rs14221	0.7	0.7	0.691	0.708267	0.662	0.6339	0.7608	0.8676	0.5798	0.64	0.62	0.75	0.86	0.6643	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.176539	NA	NA	0.648953	0.825978	NA	0.804	NA	4.6914136
1183	1	211032696	211032696	C	G	intronic	KCNH1	NA	NA	NA	ncRNA_exonic	ENSG00000224668	NA	NA	NA	Score=696;Name=lod=895	NA	1q32.2	NA	NA	NA	NA	rs4951669	0.61	0.61	0.604	0.601038	0.6421	0.3849	0.5965	0.8472	0.4519	0.64	0.4	0.57	0.85	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.501233	NA	NA	NA	NA	NA	0.572	NA	4.6912333
1183	11	7805861	7805861	A	C	intergenic	OVCH2,OR5P2	dist=77920;dist=11660	NA	NA	ncRNA_exonic	ENSG00000241008	NA	NA	NA	Score=784;Name=lod=2047	NA	11p15.4	NA	NA	NA	NA	rs11601933	0.34	0.34	0.339	0.329273	0.3091	0.2262	0.3329	0.5197	0.1963	0.32	0.24	0.33	0.5	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.045379	NA	NA	NA	NA	NA	0.362	NA	4.6909
1183	13	95410745	95410745	C	G	intergenic	SOX21,ABCC4	dist=46356;dist=261338	NA	NA	ncRNA_exonic	ENSG00000235768	NA	NA	NA	Score=329;Name=lod=29	NA	13q32.1	NA	NA	NA	NA	rs12868463	0.35	0.35	0.346	0.382588	0.3091	0.378	0.3069	0.3805	0.5194	0.32	0.39	0.29	0.4	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.472197	NA	NA	NA	NA	NA	0.304	NA	4.6909
1183	19	49621355	49621355	C	A	intronic	LIN7B	NA	NA	NA	intronic	ENSG00000104863	NA	NA	NA	NA	NA	19q13.33	Score=751;Name=V$PPARA_01	NA	NA	NA	rs1009214	0.23	0.23	0.237	0.254593	0.3091	0.0536	0.1758	0.3585	0.3211	0.31	0.05	0.2	0.34	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.296892	NA	NA	NA	NA	NA	0.217	NA	4.6909
1183	5	112850963	112850963	G	A	intronic	YTHDC2	NA	NA	NA	intronic	ENSG00000047188	NA	NA	NA	NA	NA	5q22.2	NA	NA	Name=2	NA	rs1035409	0.09	0.09	0.076	0.0852636	0.1054	0.0298	0.036	0.1536	0.0644	0.11	0.04	0.03	0.14	0.0984	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.501091	NA	NA	0.10549	0.128974	NA	0.174	NA	4.69071
1183	2	8178735	8178735	A	G	ncRNA_intronic	LINC00299	NA	NA	NA	ncRNA_intronic	ENSG00000235665,ENSG00000236790	NA	NA	NA	Score=289;Name=lod=20	NA	2p25.1	Score=892;Name=V$PAX4_02	NA	NA	NA	rs1364054	0.5	0.5	0.477	0.488219	0.674	0.3323	0.7349	0.3366	0.4877	0.66	0.28	0.73	0.34	0.609	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.203631	NA	NA	0.693119	0.354452	NA	0.514	NA	4.6905476
1183	19	7570978	7570978	T	C	exonic	C19orf45	NA	synonymous SNV	C19orf45:NM_198534:exon7:c.T1134C:p.P378P	exonic	ENSG00000198723	NA	synonymous SNV	ENSG00000198723:ENST00000361664:exon7:c.T1134C:p.P378P	NA	NA	19p13.2	NA	Name=NF-E2,IRF1,USF-1,c-Myc,AP-2gamma,HEY1,Sin3Ak-20,Pol2-4H8,Egr-1,Max,USF1_(SC-8983),Pol2,Mxi1_(bHLH),ATF3,USF2,E2F6_(H-50)	NA	NA	rs685034	0.64	0.64	0.665	0.636781	0.6889	0.4544	0.5692	0.7859	0.6176	0.7	0.45	0.62	0.79	0.6261	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.483955	NA	NA	0.661279	0.743759	NA	0.696	NA	4.6903876
1183	4	83050748	83050748	G	A	intergenic	RASGEF1B,HNRNPD	dist=657687;dist=223719	NA	NA	ncRNA_exonic	ENSG00000250826	NA	NA	NA	Score=675;Name=lod=735	NA	4q21.22	NA	NA	NA	NA	rs7657850	0.25	0.25	0.236	0.253395	0.3101	0.1905	0.2421	0.211	0.3252	0.31	0.19	0.27	0.21	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.192537	NA	NA	NA	NA	NA	0.246	NA	4.6899
1183	16	8990680	8990680	C	A	intronic	USP7	NA	NA	NA	intronic	ENSG00000187555	NA	NA	NA	NA	NA	16p13.2	NA	NA	Name=3	NA	rs2257181	0.29	0.29	0.259	0.285343	0.3101	0.2569	0.3357	0.1997	0.3691	0.33	0.26	0.39	0.19	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.448329	NA	NA	NA	NA	NA	0.304	NA	4.6899
1183	9	115931703	115931703	G	A	exonic	FKBP15	NA	synonymous SNV	FKBP15:NM_015258:exon26:c.C3286T:p.L1096L	exonic	ENSG00000119321	NA	synonymous SNV	ENSG00000119321:ENST00000238256:exon26:c.C3286T:p.L1096L,ENSG00000119321:ENST00000446284:exon26:c.C3361T:p.L1121L	NA	NA	9q32	NA	NA	NA	NA	rs3810910	0.29	0.29	0.298	0.283546	0.3489	0.1617	0.2954	0.3351	0.2638	0.35	0.18	0.3	0.32	0.3015	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.246716	NA	NA	0.326649	0.302266	NA	0.29	NA	4.6896176
1183	11	67400622	67400622	G	A	intronic	TBX10	NA	NA	NA	intronic	ENSG00000167800	NA	NA	NA	NA	NA	11q13.2	NA	NA	Name=2	NA	rs61894500	0.11	0.11	0.102	0.129593	0.0954	0.0704	0.0908	0.2141	0.1391	0.09	0.08	0.09	0.19	0.1104	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.043989	NA	NA	0.10503	0.169091	NA	0.101	NA	4.68917
1183	6	29771111	29771111	C	T	intergenic	LOC554223,HLA-G	dist=5527;dist=23645	NA	NA	ncRNA_exonic	ENSG00000213880	NA	NA	NA	Score=789;Name=lod=2148	NA	6p22.1	NA	NA	NA	NA	rs1610716	0.36	0.36	0.377	0.384585	0.3111	0.1954	0.3703	0.5991	0.3753	0.31	0.24	0.36	0.57	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.303242	NA	NA	NA	NA	NA	0.355	NA	4.6889
1183	17	16830149	16830149	T	C	intergenic	KRT16P2,TNFRSF13B	dist=94002;dist=12249	NA	NA	ncRNA_intronic	ENSG00000128438	NA	NA	NA	NA	NA	17p11.2	NA	NA	Name=21	NA	rs11078354	0.36	0.36	0.34	0.360623	0.3111	0.4514	0.3242	0.379	0.319	0.3	0.44	0.35	0.38	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.490158	NA	NA	NA	NA	NA	0.333	NA	4.6889
1183	6	32188603	32188603	C	T	exonic	NOTCH4	NA	synonymous SNV	NOTCH4:NM_004557:exon5:c.G852A:p.Q284Q	exonic	ENSG00000204301	NA	synonymous SNV	ENSG00000204301:ENST00000375023:exon5:c.G852A:p.Q284Q	NA	NA	6p21.32	NA	NA	NA	NA	rs520803	0.27	0.27	0.263	0.267772	0.3519	0.1935	0.2594	0.208	0.3446	0.34	0.19	0.3	0.22	0.306	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.074961	NA	NA	0.320116	0.213799	NA	0.348	NA	4.6886506
1183	2	212522651	212522651	A	G	intronic	ERBB4	NA	NA	NA	intronic	ENSG00000178568	NA	NA	NA	Score=625;Name=lod=462	NA	2q34	NA	NA	NA	NA	rs34621071	0.1	0.1	0.082	0.105032	0.1024	0.0962	0.183	0.0635	0.1176	0.1	0.08	0.19	0.06	0.1107	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.782696	4.782696	NA	0.098694	0.085616	NA	0.087	NA	4.688206
1183	11	75298797	75298797	A	G	exonic	MAP6	NA	synonymous SNV	MAP6:NM_033063:exon4:c.T1749C:p.D583D	exonic	ENSG00000171533	NA	synonymous SNV	ENSG00000171533:ENST00000304771:exon4:c.T1749C:p.D583D,ENSG00000171533:ENST00000526740:exon4:c.T762C:p.D254D	NA	NA	11q13.5	NA	NA	NA	NA	rs1231128	0.34	0.34	0.297	0.376198	0.3161	0.2579	0.5648	0.3041	0.5235	0.32	0.27	0.5	0.34	0.3568	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.060936	NA	NA	0.30573	0.286818	NA	0.326	NA	4.6880366
1183	2	210043728	210043728	T	C	intergenic	PTH2R,MAP2	dist=684497;dist=245043	NA	NA	ncRNA_exonic	ENSG00000229670	NA	NA	NA	Score=389;Name=lod=51	NA	2q34	NA	NA	NA	NA	rs17738719	0.23	0.23	0.214	0.246206	0.3121	0.0496	0.3228	0.2481	0.3241	0.32	0.06	0.33	0.24	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.17316	NA	NA	NA	NA	NA	0.377	NA	4.6879
1183	2	210045334	210045334	T	C	intergenic	PTH2R,MAP2	dist=686103;dist=243437	NA	NA	ncRNA_exonic	ENSG00000229670	NA	NA	NA	Score=689;Name=lod=839	NA	2q34	NA	NA	NA	NA	rs6715032	0.23	0.23	0.206	0.246206	0.3121	0.0496	0.3228	0.2481	0.3241	0.32	0.06	0.33	0.24	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.436261	NA	NA	NA	NA	NA	0.37	NA	4.6879
1183	3	107047161	107047161	A	C	intergenic	LOC344595,CCDC54	dist=1350;dist=49027	NA	NA	ncRNA_exonic	ENSG00000241218	NA	NA	NA	Score=831;Name=lod=3189	NA	3q13.12	NA	NA	NA	NA	rs7639744	0.54	0.54	0.526	0.596645	0.3121	0.8264	0.5576	0.59	0.6892	0.34	0.82	0.47	0.58	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.031713	NA	NA	NA	NA	NA	0.435	NA	4.6879
1183	10	52070947	52070947	T	C	intronic	SGMS1	NA	NA	NA	intronic	ENSG00000198964	NA	NA	NA	NA	NA	10q11.23	NA	Name=eGFP-GATA2,CTCF	NA	NA	rs2251601	0.31	0.31	0.301	0.322085	0.3121	0.4792	0.3055	0.1868	0.365	0.32	0.43	0.32	0.17	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.01648	NA	NA	NA	NA	NA	0.21	NA	4.6879
1183	15	89503727	89503727	A	G	intergenic	MFGE8,ABHD2	dist=47064;dist=127654	NA	NA	ncRNA_exonic	ENSG00000259489	NA	NA	NA	Score=575;Name=lod=289	NA	15q26.1	NA	NA	NA	NA	rs12593652	0.33	0.33	0.303	0.303514	0.3121	0.4276	0.4524	0.1785	0.2301	0.32	0.41	0.42	0.19	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.455089	1.455089	0.16	NA	NA	NA	0.275	NA	4.6879
1183	22	25119284	25119284	G	A	intronic	PIWIL3	NA	NA	NA	intronic	ENSG00000184571	NA	NA	NA	NA	NA	22q11.23	NA	NA	Name=10	NA	rs131472	0.29	0.29	0.247	0.289936	0.3121	0.1617	0.4957	0.3124	0.2229	0.31	0.17	0.45	0.29	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.495129	NA	NA	NA	NA	NA	0.254	NA	4.6879
1183	22	25119300	25119300	T	C	intronic	PIWIL3	NA	NA	NA	intronic	ENSG00000184571	NA	NA	NA	NA	NA	22q11.23	NA	NA	Name=10	NA	rs140345	0.3	0.3	0.248	0.305112	0.3121	0.1776	0.4971	0.3238	0.2679	0.31	0.18	0.45	0.3	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.498443	NA	NA	NA	NA	NA	0.254	NA	4.6879
1183	20	34560526	34560526	G	A	intronic	CNBD2	NA	NA	NA	intronic	ENSG00000149646	NA	NA	NA	NA	NA	20q11.23	NA	NA	Name=35	NA	rs11167280	0.09	0.09	0.073	0.107628	0.1014	0.0942	0.1167	0.0703	0.1718	0.1	0.08	0.13	0.06	0.1064	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.020737	2.020737	NA	0.105	0.072855	NA	0.08	NA	4.6872
1183	1	40035686	40035686	C	T	intronic	PABPC4	NA	NA	NA	ncRNA_intronic	ENSG00000228060	NA	NA	NA	Score=278;Name=lod=18	NA	1p34.3	NA	NA	NA	NA	rs17513135	0.14	0.14	0.129	0.0946486	0.2386	0.1012	0.1066	0.0106	0.045	0.23	0.11	0.14	0.02	0.1713	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.521103	1.521103	NA	0.236512	0.046754	NA	0.094	NA	4.6869213
1183	1	27503545	27503545	C	T	intergenic	SLC9A1,WDTC1	dist=21924;dist=57462	NA	NA	ncRNA_exonic	ENSG00000229985	NA	NA	NA	Score=747;Name=lod=1452	NA	1p36.11	NA	NA	NA	NA	rs12752935	0.22	0.22	0.198	0.230631	0.3131	0.1151	0.1801	0.2065	0.3333	0.34	0.1	0.21	0.2	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.071266	NA	NA	NA	NA	NA	0.196	NA	4.6869
1183	4	139482765	139482765	C	T	intergenic	LINC00499,CCRN4L	dist=137267;dist=454178	NA	NA	ncRNA_exonic	ENSG00000248795	NA	NA	NA	Score=701;Name=lod=943	NA	4q28.3	NA	NA	NA	NA	rs72718527	0.22	0.22	0.212	0.198083	0.3131	0.0694	0.2046	0.2572	0.1278	0.31	0.06	0.22	0.26	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.465889	NA	NA	NA	NA	NA	0.196	NA	4.6869
1183	22	37528576	37528576	A	G	intronic	IL2RB	NA	NA	NA	intronic	ENSG00000100385	NA	NA	NA	NA	NA	22q12.3	NA	Name=NRSF	NA	NA	rs3218318	0.36	0.36	0.384	0.372604	0.3131	0.5585	0.2233	0.298	0.4489	0.3	0.58	0.22	0.32	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.176909	NA	NA	NA	NA	NA	0.478	NA	4.6869
1183	22	50307184	50307184	G	T	intronic	ALG12	NA	NA	NA	intronic	ENSG00000182858	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs11705497	0.08	0.08	0.076	0.0702875	0.1163	0.0546	0.0807	0.0136	0.1084	0.13	0.06	0.09	0.02	0.0935	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.914425	1.914425	NA	0.103721	0.031775	NA	0.174	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000082162.1;CLNDSDB=.;CLNDSDBID=.	4.686479
1183	1	27503662	27503662	T	A	intergenic	SLC9A1,WDTC1	dist=22041;dist=57345	NA	NA	ncRNA_exonic	ENSG00000229985	NA	NA	NA	Score=747;Name=lod=1452	NA	1p36.11	NA	NA	NA	NA	rs12119525	0.24	0.24	0.25	0.263379	0.3141	0.1151	0.196	0.3207	0.3344	0.34	0.1	0.22	0.29	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.17968	NA	NA	NA	NA	NA	0.239	NA	4.6859
1183	5	25910566	25910566	A	G	intergenic	LOC340107,CDH9	dist=1069874;dist=970143	NA	NA	ncRNA_exonic	ENSG00000251593	NA	NA	NA	Score=749;Name=lod=1469	NA	5p14.1	NA	NA	NA	NA	rs12655221	0.27	0.27	0.262	0.276158	0.3141	0.3522	0.2291	0.1271	0.3937	0.3	0.36	0.28	0.12	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.943785	NA	NA	NA	NA	NA	0.239	NA	4.6859
1183	4	2175791	2175791	T	C	intronic	POLN	NA	NA	NA	intronic	ENSG00000130997	NA	NA	NA	NA	NA	4p16.3	Score=805;Name=V$POU3F2_01	NA	NA	NA	rs2022343	0.25	0.25	0.028	0.296725	0.1213	0.3502	0.2392	0.5045	0.182	0.1	0.33	0.24	0.42	0.1896	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.430562	NA	NA	0.00407	0.107581	NA	NA	NA	4.68503
1184	12	4430561	4430561	C	G	intronic	C12orf5	NA	NA	NA	intronic	ENSG00000078237	NA	NA	NA	NA	NA	12p13.32	NA	Name=TBP,AP-2gamma,NFKB,Pol2-4H8,ELK4,AP-2alpha,Oct-2,Pol2,POU2F2,GATA-1	NA	NA	rs11063080	0.3	0.3	0.263	0.289936	0.3151	0.249	0.3703	0.3048	0.229	0.32	0.22	0.36	0.34	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.898212	NA	NA	NA	NA	NA	0.167	NA	4.6849
1184	4	2175792	2175792	C	G	intronic	POLN	NA	NA	NA	intronic	ENSG00000130997	NA	NA	NA	NA	NA	4p16.3	Score=805;Name=V$POU3F2_01	NA	NA	NA	rs61383215	0.25	0.25	0.03	0.296326	0.1213	0.3502	0.2392	0.5038	0.181	0.1	0.33	0.24	0.42	0.1896	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.127281	NA	NA	0.004419	0.113255	NA	NA	NA	4.684681
1184	13	103418728	103418728	A	G	UTR3	TEX30	NM_138779:c.*23T>C	NA	NA	UTR3	ENSG00000151287	ENST00000376027:c.*159T>C,ENST00000376029:c.*159T>C,ENST00000376032:c.*23T>C,ENST00000376021:c.*23T>C,ENST00000376022:c.*159T>C,ENST00000376019:c.*23T>C	NA	NA	Score=313;Name=lod=25	NA	13q33.1	NA	NA	NA	NA	rs8054	0.35	0.35	0.347	0.334465	0.175	0.501	0.255	0.4955	0.1656	0.17	0.55	0.25	0.46	0.2633	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.406049	NA	NA	0.210465	0.46709	NA	0.355	NA	4.6845684
1184	10	129870510	129870510	A	G	intronic	PTPRE	NA	NA	NA	intronic	ENSG00000132334	NA	NA	NA	NA	NA	10q26.2	NA	NA	Name=7	NA	rs41282874	0.14	0.14	0.142	0.130791	0.1074	0.1538	0.0735	0.2352	0.0307	0.11	0.14	0.07	0.25	0.1028	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.343147	NA	NA	0.105233	0.196323	NA	0.116	NA	4.684567
1184	6	32188642	32188642	T	C	exonic	NOTCH4	NA	synonymous SNV	NOTCH4:NM_004557:exon5:c.A813G:p.P271P	exonic	ENSG00000204301	NA	synonymous SNV	ENSG00000204301:ENST00000375023:exon5:c.A813G:p.P271P	NA	NA	6p21.32	NA	NA	NA	NA	rs520688	0.28	0.28	0.27	0.280152	0.3519	0.2421	0.2594	0.2095	0.3558	0.34	0.24	0.3	0.22	0.3109	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.808315	NA	NA	0.319419	0.213118	NA	0.007	NA	4.6844476
1184	9	12708910	12708910	C	G	intronic	TYRP1	NA	NA	NA	ncRNA_intronic	ENSG00000235448	NA	NA	NA	NA	NA	9p23	NA	Name=c-Jun	NA	NA	rs2733834	0.34	0.34	0.286	0.265575	0.6491	0.0109	0.402	0.1362	0.2117	0.65	0.01	0.44	0.17	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.258429	NA	NA	NA	NA	NA	0.428	NA	4.6842333
1184	12	120888424	120888424	A	G	intronic	GATC	NA	NA	NA	ncRNA_exonic	ENSG00000219355	NA	NA	NA	Score=652;Name=lod=594	NA	12q24.31	NA	NA	NA	NA	rs1179462	0.72	0.72	0.738	0.744609	0.6491	0.7391	0.6037	0.9554	0.6636	0.64	0.71	0.61	0.95	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.004413	NA	NA	NA	NA	NA	0.754	NA	4.6842333
1184	10	27687994	27687994	A	G	exonic	PTCHD3	NA	synonymous SNV	PTCHD3:NM_001034842:exon4:c.T1533C:p.S511S	exonic	ENSG00000182077	NA	synonymous SNV	ENSG00000182077:ENST00000438700:exon4:c.T1533C:p.S511S	Score=463;Name=lod=102	NA	10p12.1	NA	NA	NA	NA	rs2484173	0.53	0.53	0.503	0.55012	0.6829	0.37	0.5202	0.5257	0.6534	0.68	0.31	0.56	0.54	0.6187	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.489572	NA	NA	0.681047	0.534952	NA	0.551	NA	4.6840196
1184	3	128257214	128257214	G	A	intergenic	LOC90246,C3orf27	dist=27785;dist=33629	NA	NA	ncRNA_exonic	ENSG00000239405	NA	NA	NA	Score=727;Name=lod=1200	NA	3q21.3	NA	NA	NA	NA	rs9854612	0.44	0.44	0.424	0.447883	0.3161	0.4524	0.4035	0.6846	0.2904	0.3	0.45	0.39	0.66	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.752928	NA	NA	NA	NA	NA	0.326	NA	4.6839
1184	7	39874281	39874281	T	C	intergenic	LINC00265,CDK13	dist=40059;dist=115678	NA	NA	ncRNA_exonic	ENSG00000233225	NA	NA	NA	Score=659;Name=lod=634	NA	7p14.1	NA	NA	NA	NA	rs113205984	0.34	0.34	0.33	0.347843	0.3161	0.2907	0.304	0.4342	0.3538	0.32	0.3	0.33	0.42	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.369447	NA	NA	NA	NA	NA	0.268	NA	4.6839
1184	11	88141635	88141635	C	T	intergenic	CTSC,GRM5	dist=70694;dist=96109	NA	NA	ncRNA_exonic	ENSG00000249489	NA	NA	NA	Score=687;Name=lod=828	NA	11q14.2	NA	NA	NA	NA	rs11019742	0.2	0.2	0.212	0.173323	0.3161	0.0813	0.2565	0.1135	0.1431	0.3	0.09	0.27	0.12	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.075811	NA	NA	NA	NA	NA	0.13	NA	4.6839
1184	11	88141958	88141958	C	T	intergenic	CTSC,GRM5	dist=71017;dist=95786	NA	NA	ncRNA_exonic	ENSG00000249489	NA	NA	NA	Score=714;Name=lod=1064	NA	11q14.2	NA	NA	NA	NA	rs11019745	0.2	0.2	0.2	0.173722	0.3161	0.0813	0.2565	0.115	0.1431	0.3	0.09	0.27	0.12	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.181135	NA	NA	NA	NA	NA	0.13	NA	4.6839
1184	20	1915226	1915226	G	A	intronic	SIRPA	NA	NA	NA	intronic	ENSG00000198053	NA	NA	NA	NA	NA	20p13	NA	NA	Name=72	NA	rs2076554	0.24	0.24	0.221	0.258387	0.3161	0.1587	0.196	0.1702	0.4652	0.32	0.16	0.23	0.21	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.755041	NA	NA	NA	NA	NA	0.239	NA	4.6839
1184	7	112375997	112375997	T	C	intergenic	LSMEM1,TMEM168	dist=245054;dist=29790	NA	NA	ncRNA_exonic	ENSG00000225358	NA	NA	NA	Score=700;Name=lod=934	NA	7q31.1	NA	NA	NA	NA	rs1615468	0.37	0.37	0.41	0.409944	0.3171	0.0694	0.2954	0.8162	0.3885	0.32	0.06	0.32	0.85	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.595544	NA	NA	NA	NA	NA	0.435	NA	4.6829
1184	11	18686916	18686916	C	T	intergenic	SPTY2D1,TMEM86A	dist=30896;dist=33435	NA	NA	ncRNA_exonic	ENSG00000257043	NA	NA	NA	Score=698;Name=lod=912	NA	11p15.1	NA	NA	NA	NA	rs9705036	0.19	0.19	0.177	0.16274	0.3171	0.1488	0.2075	0.0204	0.1789	0.31	0.14	0.24	0.04	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.342056	NA	NA	NA	NA	NA	0.174	NA	4.6829
1184	11	18687025	18687025	G	A	intergenic	SPTY2D1,TMEM86A	dist=31005;dist=33326	NA	NA	ncRNA_exonic	ENSG00000257043	NA	NA	NA	Score=554;Name=lod=238	NA	11p15.1	NA	NA	NA	NA	rs12787397	0.19	0.19	0.169	0.16274	0.3171	0.1488	0.2075	0.0204	0.1789	0.31	0.14	0.24	0.04	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.92754	NA	NA	NA	NA	NA	0.174	NA	4.6829
1184	12	30879088	30879088	T	C	intronic	CAPRIN2	NA	NA	NA	intronic	ENSG00000110888	NA	NA	NA	NA	NA	12p11.21	NA	Name=GATA-2	NA	NA	rs10843822	0.27	0.27	0.255	0.257188	0.3171	0.2937	0.2075	0.1831	0.2935	0.31	0.3	0.23	0.19	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.329567	NA	NA	NA	NA	NA	0.203	NA	4.6829
1184	20	34312658	34312658	A	G	intronic	RBM39	NA	NA	NA	intronic	ENSG00000131051	NA	NA	NA	NA	NA	20q11.22	NA	Name=Pol2,Pol2-4H8	NA	NA	rs11696947	0.09	0.09	0.079	0.109425	0.1014	0.0843	0.121	0.0983	0.1503	0.1	0.07	0.13	0.08	0.1082	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.279066	1.279066	NA	0.107558	0.100999	NA	0.087	NA	4.682842
1184	15	79851798	79851798	G	A	intergenic	KIAA1024,MTHFS	dist=87156;dist=284091	NA	NA	ncRNA_exonic	ENSG00000259493	NA	NA	NA	Score=794;Name=lod=2243	NA	15q25.1	NA	NA	NA	NA	rs1765253	0.39	0.39	0.43	0.439896	0.3181	0.3264	0.5072	0.5113	0.5378	0.32	0.33	0.44	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.22688	NA	NA	NA	NA	NA	0.428	NA	4.6819
1184	1	89225976	89225976	T	C	exonic	PKN2	NA	synonymous SNV	PKN2:NM_006256:exon3:c.T421C:p.L141L	exonic	ENSG00000065243	NA	synonymous SNV	ENSG00000065243:ENST00000316005:exon3:c.T421C:p.L141L,ENSG00000065243:ENST00000370513:exon3:c.T421C:p.L141L,ENSG00000065243:ENST00000370521:exon3:c.T421C:p.L141L	Score=669;Name=lod=701	NA	1p22.2	NA	NA	NA	NA	rs430600	0.71	0.71	0.706	0.750599	0.6561	0.6498	0.5807	0.9304	0.8292	0.68	0.63	0.64	0.9	0.6929	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.018398	NA	NA	0.63614	0.893212	NA	0.79	NA	4.6815266
1184	11	103229027	103229027	T	C	exonic	DYNC2H1	NA	synonymous SNV	DYNC2H1:NM_001377:exon83:c.T12096C:p.D4032D,DYNC2H1:NM_001080463:exon84:c.T12117C:p.D4039D	exonic	ENSG00000187240	NA	synonymous SNV	ENSG00000187240:ENST00000533197:exon1:c.T57C:p.D19D,ENSG00000187240:ENST00000375735:exon83:c.T12096C:p.D4032D,ENSG00000187240:ENST00000398093:exon84:c.T12117C:p.D4039D	Score=567;Name=lod=270	NA	11q22.3	NA	NA	NA	NA	rs2566913	0.53	0.53	0.483	0.495008	0.661	0.4871	0.6816	0.2481	0.5337	0.66	0.5	0.66	0.25	0.6589	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.003342	NA	NA	0.665565	0.318431	NA	0.536	NA	4.6812016
1184	12	109182049	109182049	T	C	exonic	SSH1	NA	synonymous SNV	SSH1:NM_018984:exon15:c.A2865G:p.T955T	exonic	ENSG00000084112	NA	synonymous SNV	ENSG00000084112:ENST00000360239:exon14:c.A1929G:p.T643T,ENSG00000084112:ENST00000326495:exon15:c.A2865G:p.T955T	NA	NA	12q24.11	NA	NA	NA	NA	rs3741778	0.52	0.52	0.492	0.508586	0.2962	0.6359	0.5216	0.7073	0.318	0.3	0.69	0.49	0.67	0.3877	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.899232	NA	NA	0.301744	0.654335	NA	0.486	NA	4.6810226
1184	1	161348897	161348897	T	A	intergenic	C1orf192,FCGR2A	dist=11224;dist=126308	NA	NA	ncRNA_exonic	ENSG00000236484	NA	NA	NA	Score=590;Name=lod=333	NA	1q23.3	NA	NA	NA	NA	rs4534403	0.36	0.36	0.371	0.39377	0.3191	0.2163	0.2464	0.6384	0.4274	0.33	0.22	0.29	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.28978	NA	NA	NA	NA	NA	0.406	NA	4.6809
1184	20	31598994	31598994	G	A	intronic	BPIFB2	NA	NA	NA	intronic	ENSG00000078898	NA	NA	NA	NA	NA	20q11.21	NA	Name=ZNF263	NA	NA	rs6141358	0.23	0.23	0.222	0.238219	0.3191	0.1181	0.3012	0.1838	0.3078	0.32	0.11	0.29	0.18	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.046815	NA	NA	NA	NA	NA	0.333	NA	4.6809
1184	7	4213877	4213877	T	C	exonic	SDK1	NA	synonymous SNV	SDK1:NM_001079653:exon7:c.T285C:p.N95N,SDK1:NM_152744:exon33:c.T4824C:p.N1608N	exonic	ENSG00000146555	NA	synonymous SNV	ENSG00000146555:ENST00000389531:exon33:c.T4824C:p.N1608N,ENSG00000146555:ENST00000404826:exon33:c.T4824C:p.N1608N	Score=419;Name=lod=67	NA	7p22.2	NA	NA	NA	NA	rs601424	0.68	0.68	0.637	0.670727	0.6561	0.7629	0.696	0.5968	0.6728	0.66	0.76	0.69	0.59	0.6836	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.150948	NA	NA	0.646163	0.62483	NA	0.63	NA	4.6808036
1184	14	69521345	69521345	G	A	exonic	DCAF5	NA	synonymous SNV	DCAF5:NM_003861:exon9:c.C2058T:p.T686T	exonic	ENSG00000139990	NA	synonymous SNV	ENSG00000139990:ENST00000341516:exon9:c.C2058T:p.T686T,ENSG00000139990:ENST00000554215:exon9:c.C1812T:p.T604T,ENSG00000139990:ENST00000556847:exon9:c.C1812T:p.T604T,ENSG00000139990:ENST00000557386:exon9:c.C2055T:p.T685T	NA	NA	14q24.1	NA	NA	NA	NA	rs61741172	0.17	0.17	0.153	0.128395	0.3787	0.001	0.1715	0.0182	0.1207	0.38	0.0017	0.22	0.03	0.2534	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.495552	NA	NA	0.35407	0.067181	NA	0.21	NA	4.6804966
1184	2	140426362	140426362	A	G	intergenic	YY1P2,LRP1B	dist=769618;dist=562634	NA	NA	ncRNA_exonic	ENSG00000235232	NA	NA	NA	NA	NA	2q22.1	NA	Name=FOXA1_(C-20)	NA	NA	rs13013764	0.19	0.19	0.186	0.157348	0.3201	0.0546	0.1412	0.143	0.1268	0.32	0.05	0.15	0.18	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.911692	NA	NA	NA	NA	NA	0.246	NA	4.6799
1184	3	182410060	182410060	C	T	intergenic	FLJ46066,ATP11B	dist=205910;dist=101231	NA	NA	ncRNA_exonic	ENSG00000243378	NA	NA	NA	NA	NA	3q26.33	NA	Name=PAX5-C20	NA	NA	rs2700879	0.36	0.36	0.349	0.358027	0.3201	0.4673	0.3487	0.3328	0.3252	0.3	0.43	0.41	0.34	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.189759	NA	NA	NA	NA	NA	0.312	NA	4.6799
1184	4	70222480	70222480	T	C	intergenic	UGT2B28,UGT2B4	dist=61712;dist=123403	NA	NA	ncRNA_exonic	ENSG00000250612	NA	NA	NA	Score=423;Name=lod=70	NA	4q13.2	NA	NA	NA	NA	rs12647013	0.35	0.35	0.37	0.330871	0.3201	0.4504	0.3156	0.2927	0.2812	0.32	0.46	0.32	0.27	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.855895	NA	NA	NA	NA	NA	0.319	NA	4.6799
1184	13	34656572	34656572	A	G	intergenic	RFC3,LINC00457	dist=115877;dist=353019	NA	NA	ncRNA_exonic	ENSG00000227254	NA	NA	NA	Score=592;Name=lod=338	NA	13q13.2	NA	NA	NA	NA	rs12584758	0.28	0.28	0.254	0.311102	0.3201	0.4296	0.2003	0.1823	0.4325	0.33	0.39	0.2	0.14	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.53762	NA	NA	NA	NA	NA	0.413	NA	4.6799
1184	1	204316082	204316082	C	T	intronic	PLEKHA6	NA	NA	NA	ncRNA_exonic	ENSG00000219133	NA	NA	NA	Score=752;Name=lod=1518	NA	1q32.1	NA	NA	NA	NA	rs11240724	0.71	0.71	0.71	0.710863	0.6541	0.8135	0.7781	0.618	0.7413	0.66	0.87	0.74	0.58	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.835117	2.835117	NA	NA	NA	NA	0.826	NA	4.6792333
1184	1	15789297	15789297	A	C	exonic	CELA2A	NA	synonymous SNV	CELA2A:NM_033440:exon4:c.A297C:p.A99A	exonic	ENSG00000142615	NA	synonymous SNV	ENSG00000142615:ENST00000359621:exon4:c.A297C:p.A99A	NA	NA	1p36.21	NA	NA	NA	NA	rs3815787	0.37	0.37	0.354	0.398762	0.3161	0.2321	0.3213	0.6762	0.3354	0.3	0.23	0.34	0.65	0.3399	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.458273	NA	NA	0.331512	0.608488	ID=COSM301916;OCCURENCE=1(central_nervous_system)	0.413	NA	4.6791546
1184	13	31735759	31735759	G	A	UTR5	HSPH1	NM_006644:c.-40C>T	NA	NA	UTR5	ENSG00000120694	ENST00000380406:c.-40C>T,ENST00000602786:c.-40C>T,ENST00000380405:c.-40C>T,ENST00000320027:c.-40C>T	NA	NA	NA	NA	13q12.3	NA	NA	Name=3	NA	rs2280059	0.22	0.22	0.201	0.252196	0.1928	0.3681	0.2464	0.1611	0.3211	0.2	0.31	0.23	0.14	0.2698	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.846679	1.846679	NA	0.19176	0.178897	NA	0.261	NA	4.6789734
1184	8	8819186	8819186	T	A	intergenic	MFHAS1,ERI1	dist=68055;dist=41128	NA	NA	ncRNA_exonic	ENSG00000207244	NA	NA	NA	Score=522;Name=lod=176	NA	8p23.1	NA	NA	NA	NA	rs4841077	0.38	0.38	0.337	0.406949	0.3211	0.5377	0.5159	0.2557	0.4877	0.31	0.55	0.46	0.23	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.30333	NA	NA	NA	NA	NA	0.29	NA	4.6789
1184	10	90984787	90984787	T	G	intronic	LIPA	NA	NA	NA	intronic	ENSG00000107798	NA	NA	NA	NA	NA	10q23.31	NA	NA	Name=41	NA	rs2297473	0.47	0.47	0.431	0.455671	0.3211	0.752	0.4741	0.2927	0.4959	0.34	0.79	0.44	0.31	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.153936	NA	NA	NA	NA	NA	0.391	NA	4.6789
1184	11	9734945	9734945	A	G	intronic	SWAP70	NA	NA	NA	intronic	ENSG00000133789	NA	NA	NA	Score=295;Name=lod=21	NA	11p15.4	NA	NA	NA	NA	rs1390679	0.27	0.27	0.29	0.253794	0.3211	0.1488	0.183	0.3313	0.2382	0.33	0.18	0.22	0.31	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.760824	1.760824	NA	NA	NA	NA	0.384	NA	4.6789
1184	11	126279365	126279365	A	T	intronic	ST3GAL4	NA	NA	NA	intronic	ENSG00000110080	NA	NA	NA	NA	NA	11q24.2	NA	NA	Name=2	NA	rs1316361	0.37	0.37	0.341	0.334864	0.3211	0.5099	0.33	0.3169	0.1963	0.32	0.49	0.32	0.34	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.2131	NA	NA	NA	NA	NA	0.464	NA	4.6789
1184	15	40604785	40604785	G	C	intergenic	PLCB2,C15orf52	dist=4611;dist=18868	NA	NA	ncRNA_exonic	ENSG00000244705	NA	NA	NA	Score=796;Name=lod=2290	NA	15q15.1	NA	NA	NA	NA	rs12441303	0.21	0.21	0.174	0.172524	0.3211	0.1825	0.1787	0.0651	0.1503	0.32	0.15	0.24	0.08	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.539122	NA	NA	NA	NA	NA	0.13	NA	4.6789
1184	17	8216737	8216737	A	G	intronic	ARHGEF15	NA	NA	NA	intronic	ENSG00000198844	NA	NA	NA	NA	NA	17p13.1	NA	Name=SIX5	NA	NA	rs2302867	0.45	0.45	0.425	0.417532	0.3211	0.6488	0.4452	0.4062	0.274	0.32	0.65	0.42	0.43	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.630594	NA	NA	NA	NA	ID=COSN165325;OCCURENCE=1(breast)	0.37	NA	4.6789
1184	14	88945591	88945591	A	G	exonic	PTPN21	NA	synonymous SNV	PTPN21:NM_007039:exon13:c.T2184C:p.P728P	exonic	ENSG00000070778	NA	synonymous SNV	ENSG00000070778:ENST00000328736:exon12:c.T2184C:p.P728P,ENSG00000070778:ENST00000556564:exon13:c.T2184C:p.P728P	NA	NA	14q31.3	NA	NA	NA	NA	rs879932	0.37	0.37	0.341	0.395567	0.2962	0.38	0.2781	0.5234	0.4243	0.31	0.36	0.28	0.52	0.3545	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.429279	NA	NA	0.337913	0.503179	NA	0.254	NA	4.6780536
1184	1	182151909	182151909	A	G	intergenic	ZNF648,GLUL	dist=121062;dist=198930	NA	NA	ncRNA_exonic	ENSG00000232096	NA	NA	NA	Score=735;Name=lod=1293	NA	1q25.3	NA	NA	NA	NA	rs1689791	0.3	0.3	0.29	0.273762	0.3221	0.256	0.3429	0.2542	0.2198	0.3	0.27	0.32	0.3	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.527473	NA	NA	NA	NA	NA	0.225	NA	4.6779
1184	2	231333890	231333890	C	T	intronic	SP100	NA	NA	NA	intronic	ENSG00000067066	NA	NA	NA	NA	NA	2q37.1	Score=930;Name=V$TATA_C	NA	NA	NA	rs1649875	0.18	0.18	0.165	0.182508	0.3221	0.0635	0.1729	0.0794	0.3078	0.31	0.06	0.19	0.11	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.582161	NA	NA	NA	NA	NA	0.13	NA	4.6779
1184	4	20259622	20259622	A	T	intronic	SLIT2	NA	NA	NA	intronic	ENSG00000145147	NA	NA	NA	NA	NA	4p15.31	NA	NA	Name=15	NA	rs61790829	0.17	0.17	NA	0.154553	0.3221	0.0446	0.1902	0.0862	0.1626	0.31	0.04	0.21	0.08	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.401621	NA	NA	NA	NA	NA	NA	NA	4.6779
1184	12	26733062	26733062	T	C	exonic	ITPR2	NA	synonymous SNV	ITPR2:NM_002223:exon33:c.A4407G:p.K1469K	exonic	ENSG00000123104	NA	synonymous SNV	ENSG00000123104:ENST00000381340:exon33:c.A4407G:p.K1469K	NA	NA	12p11.23	NA	NA	NA	NA	rs2230375	0.21	0.21	0.181	0.19988	0.3559	0.0764	0.2305	0.0885	0.2955	0.35	0.07	0.23	0.13	0.2913	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.837729	NA	NA	0.34161	0.127531	NA	0.123	NA	4.6778566
1184	1	240307892	240307892	A	G	intronic	FMN2	NA	NA	NA	ncRNA_exonic	ENSG00000228818	NA	NA	NA	Score=897;Name=lod=5865	NA	1q43	NA	NA	NA	NA	rs1539200	0.64	0.64	0.653	0.69389	0.6561	0.5188	0.5836	0.9183	0.6881	0.66	0.46	0.57	0.89	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.013897	NA	NA	NA	NA	ID=COSN163495;OCCURENCE=1(breast)	0.703	NA	4.6772333
1184	1	240308200	240308200	T	C	intronic	FMN2	NA	NA	NA	ncRNA_exonic	ENSG00000228818	NA	NA	NA	Score=897;Name=lod=5865	NA	1q43	NA	NA	NA	NA	rs12127949	0.64	0.64	0.637	0.690495	0.6561	0.5	0.5821	0.9183	0.6912	0.66	0.44	0.57	0.89	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.094096	NA	NA	NA	NA	NA	0.674	NA	4.6772333
1184	7	84613016	84613016	C	A	intergenic	SEMA3A,SEMA3D	dist=788799;dist=11856	NA	NA	ncRNA_exonic	ENSG00000229251	NA	NA	NA	Score=625;Name=lod=463	NA	7q21.11	NA	NA	NA	NA	rs35003658	0.19	0.19	0.14	0.161941	0.3231	0.0605	0.2061	0.0673	0.1973	0.33	0.07	0.23	0.09	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.88919	NA	NA	NA	NA	NA	0.21	NA	4.6769
1184	8	18240975	18240975	T	C	intergenic	NAT1,NAT2	dist=159777;dist=7780	NA	NA	ncRNA_exonic	ENSG00000244593	NA	NA	NA	Score=762;Name=lod=1659	NA	8p22	NA	NA	NA	NA	rs28672253	0.26	0.26	0.248	0.286542	0.3231	0.2639	0.2089	0.2345	0.3978	0.32	0.24	0.21	0.23	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.287422	NA	NA	NA	NA	NA	0.261	NA	4.6769
1184	8	18240991	18240991	G	A	intergenic	NAT1,NAT2	dist=159793;dist=7764	NA	NA	ncRNA_exonic	ENSG00000244593	NA	NA	NA	Score=762;Name=lod=1659	NA	8p22	NA	NA	NA	NA	rs28629910	0.26	0.26	0.256	0.286542	0.3231	0.2639	0.2089	0.2345	0.3978	0.32	0.24	0.21	0.23	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.081233	NA	NA	NA	NA	NA	0.261	NA	4.6769
1184	12	55974324	55974324	C	A	intergenic	OR2AP1,OR10P1	dist=5196;dist=56352	NA	NA	ncRNA_intronic	ENSG00000258763	NA	NA	NA	Score=470;Name=lod=108	NA	12q13.2	NA	NA	NA	NA	rs10876818	0.45	0.45	0.482	0.476238	0.3231	0.5407	0.3343	0.6135	0.4826	0.34	0.51	0.34	0.62	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.61407	1.61407	NA	NA	NA	NA	0.399	NA	4.6769
1184	20	44269656	44269656	G	A	intergenic	WFDC9,WFDC11	dist=9749;dist=7546	NA	NA	ncRNA_exonic	ENSG00000235508	NA	NA	NA	Score=812;Name=lod=2651	NA	20q13.12	NA	NA	NA	NA	rs3091816	0.36	0.36	0.288	0.375799	0.3231	0.4415	0.2579	0.3903	0.4264	0.31	0.42	0.28	0.44	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.049581	NA	NA	NA	NA	NA	0.116	NA	4.6769
1184	17	80043739	80043739	A	G	exonic	FASN	NA	synonymous SNV	FASN:NM_004104:exon23:c.T3741C:p.A1247A	exonic	ENSG00000169710	NA	synonymous SNV	ENSG00000169710:ENST00000306749:exon23:c.T3741C:p.A1247A	NA	NA	17q25.3	NA	NA	NA	NA	rs2229422	0.26	0.26	0.238	0.236022	0.3121	0.2877	0.2032	0.1997	0.1769	0.3	0.3	0.22	0.18	0.3675	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.420111	NA	NA	0.310712	0.22528	ID=COSM437819;OCCURENCE=1(breast)	0.225	NA	4.6763546
1184	5	57754004	57754004	C	T	intronic	PLK2	NA	NA	NA	intronic	ENSG00000145632	NA	NA	NA	NA	NA	5q11.2	Score=912;Name=V$FOXJ2_01	NA	Name=105	NA	rs697135	0.44	0.44	0.453	0.422324	0.4523	0.2222	0.4265	0.6475	0.2904	0.47	0.2	0.45	0.67	0.4229	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.723303	NA	NA	0.448476	0.623462	NA	0.442	NA	4.676324
1184	13	50080847	50080847	A	G	exonic	PHF11	NA	synonymous SNV	PHF11:NM_001040443:exon2:c.A171G:p.L57L,PHF11:NM_001040444:exon3:c.A54G:p.L18L	exonic	ENSG00000136147	NA	synonymous SNV	ENSG00000136147:ENST00000378319:exon2:c.A171G:p.L57L,ENSG00000136147:ENST00000442195:exon2:c.A54G:p.L18L,ENSG00000136147:ENST00000488958:exon2:c.A54G:p.L18L,ENSG00000136147:ENST00000357596:exon3:c.A54G:p.L18L,ENSG00000136147:ENST00000465045:exon3:c.A54G:p.L18L,ENSG00000136147:ENST00000485919:exon3:c.A54G:p.L18L	NA	Name=Cardiac hypertrophy	13q14.2	NA	NA	NA	NA	rs2031532	0.79	0.79	0.793	0.782149	0.6421	0.873	0.745	0.9145	0.68	0.65	0.87	0.75	0.93	0.7052	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.1797	NA	NA	0.643372	0.878575	NA	0.783	NA	4.6759946
1184	1	202122783	202122783	C	A	intronic	PTPN7	NA	NA	NA	intronic	ENSG00000143851	NA	NA	NA	NA	NA	1q32.1	NA	Name=Pol2-4H8	NA	NA	rs11590076	0.2	0.2	0.179	0.215256	0.3241	0.0665	0.2695	0.1172	0.3507	0.32	0.05	0.27	0.12	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.903334	NA	NA	NA	NA	NA	0.217	NA	4.6759
1184	2	3469278	3469278	C	G	intronic	TRAPPC12	NA	NA	NA	intronic	ENSG00000171853	NA	NA	NA	NA	NA	2p25.3	NA	NA	Name=8	NA	rs4971513	0.33	0.33	0.329	0.326078	0.3241	0.3452	0.2406	0.3487	0.3384	0.32	0.36	0.28	0.35	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.413171	NA	NA	NA	NA	NA	0.406	NA	4.6759
1184	4	144682805	144682805	G	C	intergenic	FREM3,GYPE	dist=60977;dist=109214	NA	NA	ncRNA_exonic	ENSG00000250345	NA	NA	NA	Score=584;Name=lod=316	NA	4q31.21	NA	NA	NA	NA	rs17694529	0.19	0.19	0.18	0.158946	0.3241	0.0873	0.2305	0.0265	0.1912	0.34	0.08	0.25	0.03	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.258491	NA	NA	NA	NA	NA	0.203	NA	4.6759
1184	7	84613028	84613028	T	C	intergenic	SEMA3A,SEMA3D	dist=788811;dist=11844	NA	NA	ncRNA_exonic	ENSG00000229251	NA	NA	NA	Score=625;Name=lod=463	NA	7q21.11	NA	NA	NA	NA	rs10237102	0.22	0.22	0.144	0.202676	0.3241	0.0605	0.2205	0.2133	0.1973	0.33	0.07	0.23	0.22	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.761366	NA	NA	NA	NA	NA	0.268	NA	4.6759
1184	17	80355975	80355975	C	T	intronic	OGFOD3	NA	NA	NA	intronic	ENSG00000181396	NA	NA	NA	NA	NA	17q25.3	NA	NA	Name=3	NA	rs62079527	0.15	0.15	0.15	0.151158	0.3241	0.003	0.1816	0.028	0.271	0.33	0.0017	0.2	0.03	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.285095	NA	NA	NA	NA	NA	0.101	NA	4.6759
1184	19	50927059	50927059	G	T	intronic	SPIB	NA	NA	NA	intronic	ENSG00000142539,ENSG00000269404	NA	NA	NA	NA	NA	19q13.33	NA	Name=NRSF	NA	NA	rs76521311	0.05	0.05	0.045	0.0634984	0.0964	0.0238	0.0432	0.0091	0.1585	0.09	0.02	0.06	0.01	0.1282	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.092827	NA	NA	0.099555	0.038073	NA	0.014	NA	4.675845
1184	19	17296679	17296679	G	A	intronic	MYO9B	NA	NA	NA	intronic	ENSG00000099331	NA	NA	NA	NA	NA	19p13.11	NA	Name=Pol2-4H8	NA	NA	rs2279004	0.23	0.23	0.21	0.209065	0.1541	0.4325	0.33	0.053	0.1605	0.16	0.44	0.28	0.05	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.975508	NA	NA	0.170292	0.067628	NA	0.101	NA	4.675608
1184	14	103878882	103878882	T	C	intronic	MARK3	NA	NA	NA	ncRNA_exonic	ENSG00000244691	NA	NA	NA	Score=750;Name=lod=1489	NA	14q32.32	NA	NA	NA	NA	rs4906321	0.69	0.69	0.623	0.680911	0.6581	0.8403	0.7651	0.5257	0.6902	0.66	0.82	0.75	0.52	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.226419	NA	NA	NA	NA	NA	0.638	NA	4.6752333
1184	9	123671520	123671520	G	A	exonic	TRAF1	NA	synonymous SNV	TRAF1:NM_001190947:exon5:c.C654T:p.P218P,TRAF1:NM_005658:exon7:c.C1020T:p.P340P,TRAF1:NM_001190945:exon8:c.C1020T:p.P340P	exonic	ENSG00000056558	NA	synonymous SNV	ENSG00000056558:ENST00000546084:exon5:c.C654T:p.P218P,ENSG00000056558:ENST00000373887:exon7:c.C1020T:p.P340P,ENSG00000056558:ENST00000540010:exon8:c.C1020T:p.P340P	Score=497;Name=lod=140	NA	9q33.2	NA	NA	NA	NA	rs2239657	0.7	0.7	0.708	0.732029	0.6412	0.7242	0.6902	0.7776	0.8016	0.65	0.72	0.7	0.75	0.6877	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.173572	NA	NA	0.662674	0.754426	ID=COSM1459713;OCCURENCE=1(large_intestine)	0.645	NA	4.6750926
1185	8	128098838	128098838	G	A	intergenic	PCAT1,POU5F1B	dist=65579;dist=329019	NA	NA	ncRNA_exonic	ENSG00000224722	NA	NA	NA	Score=612;Name=lod=408	NA	8q24.21	NA	NA	NA	NA	rs55905282	0.18	0.18	0.148	0.130791	0.325	0.0526	0.1902	0.0325	0.1022	0.34	0.07	0.21	0.04	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.633097	2.633097	NA	NA	NA	NA	0.29	NA	4.675
1185	11	67399914	67399914	G	T	intronic	TBX10	NA	NA	NA	intronic	ENSG00000167800	NA	NA	NA	NA	NA	11q13.2	NA	Name=HNF4A_(H-171),HDAC2_(SC-6296),HNF4G_(SC-6558),p300,HNF4A,TCF4,SP1	NA	NA	rs11227869	0.15	0.15	0.133	0.182109	0.0944	0.0704	0.098	0.41	0.1391	0.09	0.08	0.1	0.36	0.1258	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.180386	NA	NA	0.104822	0.3125	NA	0.138	NA	4.674978
1185	5	73930751	73930751	C	T	exonic	ENC1	NA	synonymous SNV	ENC1:NM_001256576:exon2:c.G1341A:p.K447K,ENC1:NM_003633:exon2:c.G1560A:p.K520K,ENC1:NM_001256574:exon3:c.G1560A:p.K520K,ENC1:NM_001256575:exon3:c.G1560A:p.K520K	exonic	ENSG00000171617	NA	synonymous SNV	ENSG00000171617:ENST00000302351:exon2:c.G1560A:p.K520K,ENSG00000171617:ENST00000510316:exon2:c.G1341A:p.K447K,ENSG00000171617:ENST00000537006:exon3:c.G1560A:p.K520K	Score=617;Name=lod=429	NA	5q13.3	NA	NA	NA	NA	rs300239	0.65	0.65	0.638	0.617812	0.6948	0.6181	0.7464	0.5287	0.5675	0.7	0.65	0.75	0.5	0.6427	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.060476	NA	NA	0.654419	0.549478	NA	0.638	NA	4.6747476
1185	9	4574022	4574022	A	C	intronic	SLC1A1	NA	NA	NA	intronic	ENSG00000106686,ENSG00000106688	NA	NA	NA	NA	NA	9p24.2	NA	Name=GATA-2	NA	NA	rs12682807	0.12	0.12	0.099	0.10643	0.1193	0.255	0.1023	0.0053	0.0798	0.12	0.2	0.13	0.01	0.1035	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.704292	NA	NA	0.102791	0.027463	NA	0.159	NA	4.674409
1185	1	240308348	240308348	C	G	intronic	FMN2	NA	NA	NA	ncRNA_exonic	ENSG00000228818	NA	NA	NA	Score=897;Name=lod=5865	NA	1q43	NA	NA	NA	NA	rs10926140	0.64	0.64	0.613	0.692692	0.659	0.502	0.585	0.9183	0.6953	0.66	0.44	0.57	0.89	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.295186	NA	NA	NA	NA	NA	0.667	NA	4.6743333
1185	18	28721922	28721922	G	A	intronic	DSC1	NA	NA	NA	ncRNA_intronic	ENSG00000265888	NA	NA	NA	NA	NA	18q12.1	NA	NA	Name=3	NA	rs12458919	0.37	0.37	0.348	0.344848	0.2127	0.5665	0.3746	0.4085	0.1452	0.2	0.57	0.35	0.4	0.2621	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.464697	NA	NA	0.184315	0.398094	NA	0.254	NA	4.6742183
1185	7	75747241	75747241	T	C	intergenic	MDH2,SRRM3	dist=51311;dist=83975	NA	NA	ncRNA_intronic	ENSG00000224273	NA	NA	NA	Score=639;Name=lod=528	NA	7q11.23	NA	NA	NA	NA	rs55812043	0.5	0.5	0.499	0.514976	0.326	0.6071	0.4035	0.6876	0.4601	0.33	0.63	0.4	0.7	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.481797	NA	NA	NA	NA	NA	0.601	NA	4.674
1185	16	20615730	20615730	G	C	intergenic	ACSM2B,ACSM1	dist=28035;dist=18829	NA	NA	ncRNA_exonic	ENSG00000260762	NA	NA	NA	Score=346;Name=lod=34	NA	16p12.3	NA	NA	NA	NA	rs9921199	NA	NA	0.62	0.617212	0.326	0.8472	0.3415	0.8275	0.591	NA	NA	NA	NA	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.473302	NA	NA	NA	NA	NA	0.587	NA	4.674
1185	1	165992161	165992161	T	C	intergenic	UCK2,FAM78B	dist=111306;dist=47095	NA	NA	ncRNA_exonic	ENSG00000226292	NA	NA	NA	Score=786;Name=lod=2087	NA	1q24.1	NA	NA	NA	NA	rs11585763	0.29	0.29	0.309	0.340655	0.327	0.1865	0.2104	0.4327	0.4816	0.32	0.19	0.21	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.272726	2.272726	NA	NA	NA	NA	0.348	NA	4.673
1185	4	39229771	39229771	G	A	intronic	WDR19	NA	NA	NA	intronic	ENSG00000157796	NA	NA	NA	NA	NA	4p14	NA	NA	Name=32	NA	rs11730558	0.28	0.28	0.283	0.282548	0.327	0.1726	0.255	0.3608	0.2638	0.31	0.17	0.22	0.38	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.594267	NA	NA	NA	NA	NA	0.312	NA	4.673
1185	11	5593037	5593037	T	A	intergenic	OR52H1,OR52B6	dist=26284;dist=9070	NA	NA	ncRNA_exonic	ENSG00000229534	NA	NA	NA	Score=668;Name=lod=692	NA	11p15.4	NA	NA	NA	NA	rs7102511	0.47	0.47	0.465	0.497604	0.327	0.629	0.5447	0.531	0.4591	0.34	0.62	0.51	0.5	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.883454	NA	NA	NA	NA	NA	0.384	NA	4.673
1185	6	47563692	47563692	C	T	exonic	CD2AP	NA	synonymous SNV	CD2AP:NM_012120:exon12:c.C1204T:p.L402L	exonic	ENSG00000198087	NA	synonymous SNV	ENSG00000198087:ENST00000359314:exon12:c.C1204T:p.L402L	NA	NA	6p12.3	NA	Name=FOXA1_(C-20),GR	Name=8	NA	rs2039503	0.98	0.98	0.977	0.983027	1	1	0.9957	0.938	1	1	1	0.99	0.93	0.9942	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.331402	NA	NA	0.999884	0.928507	NA	0.949	NA	4.6725826
1185	19	42373893	42373893	C	T	intronic	RPS19	NA	NA	NA	intronic	ENSG00000105372	NA	NA	NA	NA	NA	19q13.2	NA	Name=Pol2-4H8,CTCF_(SC-5916)	Name=8	NA	rs2075751	0.78	0.78	0.775	0.759185	0.667	0.8036	0.6758	0.9607	0.5951	0.69	0.81	0.65	0.96	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.10508	NA	NA	0.660591	0.921965	NA	0.761	NA	4.672409
1185	5	78580368	78580368	G	A	intronic	JMY	NA	NA	NA	ncRNA_exonic	ENSG00000213757	NA	NA	NA	Score=815;Name=lod=2747	NA	5q14.1	NA	NA	NA	NA	rs4704552	0.71	0.71	0.736	0.706669	0.661	0.631	0.6052	0.9675	0.5511	0.67	0.63	0.58	0.96	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.241856	NA	NA	NA	NA	NA	0.804	NA	4.6723333
1185	12	20602848	20602848	A	T	intronic	PDE3A	NA	NA	NA	ncRNA_exonic	ENSG00000131982	NA	NA	NA	Score=707;Name=lod=995	NA	12p12.2	NA	NA	NA	NA	rs10841536	0.51	0.51	0.474	0.509185	0.661	0.3393	0.6931	0.4319	0.502	0.65	0.32	0.65	0.4	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.185542	NA	NA	NA	NA	NA	0.254	NA	4.6723333
1185	14	65392722	65392722	T	C	intronic	CHURC1,CHURC1-FNTB	NA	NA	NA	intronic	ENSG00000125954,ENSG00000258289	NA	NA	NA	Score=523;Name=lod=178	NA	14q23.3	NA	NA	NA	NA	rs72726300	0.08	0.08	0.074	0.0591054	0.1093	0.0853	0.0735	0.0091	0.0378	0.12	0.09	0.09	0.01	0.1012	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.19667	2.19667	NA	0.117373	0.021818	ID=COSM84255;OCCURENCE=1(pancreas)	0.029	NA	4.672127
1185	18	28721913	28721913	C	T	intronic	DSC1	NA	NA	NA	ncRNA_intronic	ENSG00000265888	NA	NA	NA	NA	NA	18q12.1	NA	NA	Name=3	NA	rs12458870	0.37	0.37	0.351	0.344649	0.2127	0.5665	0.3746	0.4077	0.1452	0.2	0.57	0.35	0.4	0.2613	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.991611	NA	NA	0.187224	0.401271	NA	0.254	NA	4.6721093
1185	3	72933767	72933767	C	T	intergenic	SHQ1,GXYLT2	dist=36169;dist=3618	NA	NA	ncRNA_exonic	ENSG00000271266	NA	NA	NA	Score=526;Name=lod=183	NA	3p13	NA	NA	NA	NA	rs6805260	0.19	0.19	0.168	0.154553	0.328	0.0109	0.2522	0.1074	0.1186	0.34	0.01	0.27	0.12	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.418838	NA	NA	NA	NA	NA	0.116	NA	4.672
1185	15	79852090	79852090	C	A	intergenic	KIAA1024,MTHFS	dist=87448;dist=283799	NA	NA	ncRNA_exonic	ENSG00000259493	NA	NA	NA	Score=794;Name=lod=2243	NA	15q25.1	NA	NA	NA	NA	rs1765254	0.41	0.41	0.419	0.452476	0.328	0.3264	0.5173	0.5212	0.5716	0.33	0.33	0.47	0.55	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.341279	NA	NA	NA	NA	NA	0.406	NA	4.672
1185	16	3373351	3373351	A	G	intergenic	ZNF75A,OR2C1	dist=4775;dist=32538	NA	NA	ncRNA_exonic	ENSG00000262316	NA	NA	NA	Score=550;Name=lod=229	NA	16p13.3	NA	NA	NA	NA	rs62033651	0.19	0.19	0.146	0.16274	0.328	0.0327	0.3458	0.0492	0.1503	0.32	0.03	0.35	0.05	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.130868	NA	NA	NA	NA	NA	0.203	NA	4.672
1185	16	48752787	48752787	A	G	intergenic	N4BP1,CBLN1	dist=108667;dist=559042	NA	NA	ncRNA_exonic	ENSG00000260726	NA	NA	NA	Score=289;Name=lod=20	NA	16q12.1	NA	NA	NA	NA	rs12386019	0.55	0.55	0.55	0.585663	0.328	0.8442	0.5216	0.5628	0.6605	0.33	0.88	0.46	0.59	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.365514	NA	NA	NA	NA	NA	0.37	NA	4.672
1185	18	60109717	60109717	C	T	intergenic	TNFRSF11A,ZCCHC2	dist=54774;dist=80941	NA	NA	ncRNA_exonic	ENSG00000266920	NA	NA	NA	Score=860;Name=lod=4160	NA	18q21.33	NA	NA	NA	NA	rs3744931	0.25	0.25	0.243	0.215855	0.328	0.0248	0.3228	0.3389	0.0552	0.32	0.03	0.32	0.34	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.669463	2.669463	NA	NA	NA	NA	0.362	NA	4.672
1185	16	2138398	2138398	C	T	intronic	TSC2	NA	NA	NA	intronic	ENSG00000103197	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs13332221	0.16	0.16	0.157	0.167732	0.1163	NA	0.1398	0.4584	0.0204	0.11	NA	0.16	0.42	0.1102	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.133071	NA	NA	0.101652	0.396858	NA	0.239	CLINSIG=untested;CLNDBN=Tuberous_sclerosis_syndrome;CLNREVSTAT=not;CLNACC=RCV000042680.2;CLNDSDB=GeneReviews:MedGen:OMIM:SNOMED_CT;CLNDSDBID=NBK1220:C0041341:191100:7199000	4.671848
1185	2	98206188	98206188	C	G	UTR5	ANKRD36B	NM_025190:c.-40G>C	NA	NA	ncRNA_exonic	ENSG00000196912	NA	NA	NA	NA	NA	2q11.2	NA	Name=TAF1,Pol2,Pol2-4H8,HEY1,TBP	Name=138	NA	rs1868445	0.47	0.47	0.421	0.376597	0.6491	0.3006	0.438	0.3222	0.2045	0.64	0.34	0.48	0.33	0.5283	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.434939	NA	NA	0.650849	0.396676	NA	0.036	NA	4.671751
1185	1	159832425	159832425	G	A	UTR5	VSIG8	NM_001013661:c.-114C>T	NA	NA	UTR5	ENSG00000243284	ENST00000368100:c.-114C>T	NA	NA	Score=476;Name=lod=115	NA	1q23.2	NA	NA	NA	NA	rs2494507	0.5	0.5	0.446	0.495008	0.662	0.499	0.5778	0.233	0.6145	0.68	0.44	0.58	0.25	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.688282	3.688282	NA	NA	NA	NA	0.449	NA	4.6713334
1185	4	122999081	122999081	G	A	intergenic	TRPC3,KIAA1109	dist=126172;dist=92677	NA	NA	ncRNA_exonic	ENSG00000237868	NA	NA	NA	Score=683;Name=lod=799	NA	4q27	NA	NA	NA	NA	rs4833809	0.39	0.39	0.34	0.390775	0.329	0.5923	0.5504	0.0484	0.5961	0.36	0.63	0.5	0.08	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.484971	NA	NA	NA	NA	NA	0.297	NA	4.671
1185	6	71318071	71318071	T	C	intergenic	C6orf57,SMAP1	dist=19465;dist=59408	NA	NA	ncRNA_exonic	ENSG00000232389	NA	NA	NA	Score=772;Name=lod=1830	NA	6q13	NA	NA	NA	NA	rs2691511	0.24	0.24	0.234	0.233227	0.329	0.0179	0.1902	0.3903	0.1748	0.34	0.02	0.2	0.36	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.076995	NA	NA	NA	NA	NA	0.304	NA	4.671
1185	8	53888458	53888458	A	T	intergenic	NPBWR1,OPRK1	dist=35004;dist=249818	NA	NA	ncRNA_exonic	ENSG00000248911	NA	NA	NA	Score=653;Name=lod=602	NA	8q11.23	NA	NA	NA	NA	rs2555197	0.34	0.34	0.349	0.349042	0.329	0.1954	0.2781	0.5356	0.3262	0.33	0.2	0.32	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.820268	NA	NA	NA	NA	NA	0.333	NA	4.671
1185	12	6588445	6588445	A	G	intergenic	VAMP1,MRPL51	dist=8602;dist=12871	NA	NA	ncRNA_exonic	ENSG00000256913	NA	NA	NA	Score=576;Name=lod=291	NA	12p13.31	NA	NA	NA	NA	rs2008134	0.24	0.24	0.216	0.219848	0.329	0.3304	0.1859	0.0204	0.2873	0.32	0.33	0.2	0.02	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.186687	NA	NA	NA	NA	NA	0.188	NA	4.671
1185	18	60110284	60110284	T	C	intergenic	TNFRSF11A,ZCCHC2	dist=55341;dist=80374	NA	NA	ncRNA_exonic	ENSG00000266920	NA	NA	NA	Score=860;Name=lod=4160	NA	18q21.33	NA	NA	NA	NA	rs59483290	0.25	0.25	0.246	0.217053	0.329	0.0248	0.3242	0.3404	0.0573	0.32	0.03	0.32	0.34	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.092693	NA	NA	NA	NA	NA	0.355	NA	4.671
1185	6	32548068	32548068	T	A	intronic	HLA-DRB1	NA	NA	NA	intronic	ENSG00000196126	NA	NA	NA	NA	NA	6p21.32	Score=834;Name=V$EVI1_04	NA	NA	NA	rs4498414	0.11	0.11	0.13	0.08127	0.162	0.0278	0.1427	0.0666	0.0297	0.17	0.04	0.17	0.08	0.1672	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.908458	NA	NA	NA	NA	ID=COSN167740;OCCURENCE=1(large_intestine)	0.065	NA	4.6708
1185	6	15374533	15374533	G	A	intronic	JARID2	NA	NA	NA	intronic	ENSG00000008083	NA	NA	NA	NA	NA	6p22.3	NA	NA	Name=9	NA	rs13214720	0.07	0.07	0.069	0.0754792	0.1103	0.0694	0.0764	0.0197	0.1207	0.1	0.06	0.08	0.03	0.0995	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.415754	NA	NA	0.119419	0.025647	NA	0.188	NA	4.670781
1185	20	44518843	44518843	A	T	ncRNA_intronic	NEURL2	NA	NA	NA	UTR5	ENSG00000064601	ENST00000606788:c.-1122A>T	NA	NA	NA	NA	20q13.12	NA	Name=CTCF,CHD2_(N-1250),ELF1_(SC-631),Rad21,Max,Pol2,YY1_(C-20),E2F6_(H-50),TAF1,USF-1,TBP,CTCF_(C-20),RFX5_(N-494),CTCF_(SC-5916),Sin3Ak-20,FOSL2	Name=134	NA	rs3817731	0.61	0.61	0.579	0.588658	0.6074	0.6746	0.7262	0.4705	0.5429	0.63	0.66	0.69	0.45	0.6169	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.693508	NA	NA	0.605165	0.505234	NA	0.616	NA	4.670535
1185	16	3406516	3406516	A	G	exonic	OR2C1	NA	synonymous SNV	OR2C1:NM_012368:exon1:c.A576G:p.T192T	exonic	ENSG00000168158	NA	synonymous SNV	ENSG00000168158:ENST00000304936:exon1:c.A576G:p.T192T	NA	NA	16p13.3	NA	NA	NA	NA	rs11643487	0.32	0.32	0.307	0.316893	0.336	0.1736	0.2882	0.4357	0.3047	0.34	0.17	0.31	0.45	0.3212	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.276465	NA	NA	0.338953	0.429222	NA	0.413	NA	4.6705136
1185	11	75110680	75110680	C	T	intronic	RPS3	NA	NA	NA	intronic	ENSG00000149273	NA	NA	NA	NA	NA	11q13.4	NA	Name=GTF2B,TCF12,TBP,CCNT2,c-Myc,HEY1,NFKB,CTCF_(C-20),GCN5,Ini1,YY1,HA-E2F1,Sin3Ak-20,Pol2-4H8,Pol2(b),JunD,ZZZ3,CTCF,EBF1_(C-8),p300,GTF2F1_(RAP-74),Max,ELF1_(SC-631),Oct-2,Pol2,SP1,NRSF,Pol2(phosphoS2),TCF4,YY1_(C-20),TAF7_(SQ-8),TAF1,POU2F2,HMGN3	NA	NA	rs7131286	0.29	0.29	0.315	0.29393	0.173	0.2669	0.1513	0.5605	0.1871	0.18	0.28	0.17	0.56	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.122744	NA	NA	0.156505	0.486272	NA	0.217	NA	4.670495
1185	3	111289827	111289827	A	G	intronic	CD96	NA	NA	NA	ncRNA_exonic	ENSG00000240787	NA	NA	NA	Score=295;Name=lod=21	NA	3q13.13	NA	NA	NA	NA	rs721336	0.65	0.65	0.658	0.66873	0.663	0.6329	0.6556	0.6997	0.6789	0.67	0.63	0.62	0.68	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.84716	1.84716	NA	NA	NA	NA	0.732	NA	4.6703333
1185	3	72925997	72925997	C	T	intergenic	SHQ1,GXYLT2	dist=28399;dist=11388	NA	NA	ncRNA_exonic	ENSG00000240135	NA	NA	NA	Score=651;Name=lod=587	NA	3p13	NA	NA	NA	NA	rs7640629	0.21	0.21	0.194	0.192093	0.33	0.0427	0.2291	0.1906	0.18	0.34	0.03	0.25	0.2	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.677079	NA	NA	NA	NA	NA	0.123	NA	4.67
1185	5	144609533	144609533	G	A	intergenic	KCTD16,PRELID2	dist=752589;dist=529049	NA	NA	ncRNA_exonic	ENSG00000215325	NA	NA	NA	Score=668;Name=lod=689	NA	5q32	NA	NA	NA	NA	rs17471413	0.17	0.17	0.141	0.142572	0.33	0.0675	0.232	0.0446	0.0961	0.33	0.05	0.23	0.04	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.175107	NA	NA	NA	NA	NA	0.196	NA	4.67
1185	6	31243767	31243767	G	C	intergenic	HLA-C,HLA-B	dist=3854;dist=77882	NA	NA	ncRNA_exonic	ENSG00000214892	NA	NA	NA	Score=429;Name=lod=74	NA	6p21.33	NA	NA	NA	NA	rs3931670	0.3	0.3	0.292	0.322284	0.33	0.1389	0.3084	0.4115	0.3926	0.33	0.16	0.3	0.4	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.9122	NA	NA	NA	NA	NA	0.225	NA	4.67
1185	11	61490486	61490486	C	T	intronic	DAGLA	NA	NA	NA	intronic	ENSG00000134780	NA	NA	NA	NA	Name=Phospholipid levels (plasma)	11q12.2	NA	NA	NA	NA	rs198426	0.15	0.15	0.152	0.133586	0.33	0.0258	0.2017	0.0129	0.1575	0.31	0.02	0.21	0.02	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.678663	NA	NA	NA	NA	NA	0.159	NA	4.67
1185	11	111750430	111750430	A	G	intronic	C11orf1	NA	NA	NA	intronic	ENSG00000137720,ENSG00000255561	NA	NA	NA	NA	NA	11q23.1	NA	Name=YY1,Pol2	NA	NA	rs7107213	0.27	0.27	0.26	0.244609	0.33	0.1915	0.3228	0.1982	0.2188	0.32	0.18	0.36	0.23	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.907553	NA	NA	NA	NA	NA	0.326	NA	4.67
1185	1	24859665	24859665	G	A	exonic	RCAN3	NA	synonymous SNV	RCAN3:NM_001251980:exon3:c.G432A:p.P144P,RCAN3:NM_001251981:exon3:c.G288A:p.P96P,RCAN3:NM_001251983:exon3:c.G87A:p.P29P,RCAN3:NM_001251984:exon3:c.G87A:p.P29P,RCAN3:NM_001251977:exon4:c.G462A:p.P154P,RCAN3:NM_001251978:exon4:c.G462A:p.P154P,RCAN3:NM_001251979:exon4:c.G462A:p.P154P,RCAN3:NM_013441:exon4:c.G462A:p.P154P	exonic	ENSG00000117602	NA	synonymous SNV	ENSG00000117602:ENST00000538532:exon2:c.G288A:p.P96P,ENSG00000117602:ENST00000374395:exon4:c.G462A:p.P154P,ENSG00000117602:ENST00000436717:exon4:c.G432A:p.P144P	NA	NA	1p36.11	NA	NA	NA	NA	rs196430	0.41	0.41	0.393	0.383586	0.3221	0.6776	0.3314	0.2458	0.3671	0.34	0.68	0.31	0.28	0.3552	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.35072	NA	NA	0.319651	0.266909	NA	0.254	NA	4.6697156
1185	1	21939741	21939741	G	C	intronic	RAP1GAP	NA	NA	NA	intronic	ENSG00000076864	NA	NA	NA	NA	NA	1p36.12	NA	Name=YY1,NRSF,eGFP-JunD,GATA-2,Pol2-4H8,E2F6_(H-50),GATA-1,Pol2(b),TAL1_(SC-12984),TBP,eGFP-GATA2,HEY1,ZBTB7A_(SC-34508)	Name=2	NA	rs1256282	0.47	0.47	0.421	0.48103	0.4264	0.5357	0.6484	0.4085	0.4601	0.42	0.5	0.63	0.41	0.4675	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.039416	NA	NA	0.436395	0.41103	ID=COSN163000;OCCURENCE=1(breast),10(lung)	0.457	NA	4.669705
1185	13	101881777	101881777	G	A	exonic	NALCN	NA	synonymous SNV	NALCN:NM_052867:exon13:c.C1593T:p.V531V	exonic	ENSG00000102452	NA	synonymous SNV	ENSG00000102452:ENST00000251127:exon13:c.C1593T:p.V531V,ENSG00000102452:ENST00000376196:exon13:c.C1593T:p.V531V	NA	NA	13q33.1	NA	NA	NA	NA	rs3916906	0.19	0.19	0.193	0.192292	0.3519	0.0417	0.1888	0.1029	0.3067	0.33	0.02	0.22	0.14	0.2858	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.554888	NA	NA	0.359419	0.133681	ID=COSM147711;OCCURENCE=1(stomach)	0.283	NA	4.6695476
1185	19	39936502	39936502	G	A	UTR5	SUPT5H	NM_001111020:c.-29G>A,NM_001130825:c.-29G>A,NM_003169:c.-29G>A	NA	NA	UTR5	ENSG00000196235	ENST00000594990:c.-29G>A,ENST00000599117:c.-29G>A,ENST00000402194:c.-29G>A,ENST00000432763:c.-29G>A,ENST00000359191:c.-29G>A,ENST00000598725:c.-29G>A	NA	NA	NA	NA	19q13.2	NA	Name=Ini1,ZNF263,SRF,GR	Name=2	NA	rs1932	0.59	0.59	0.611	0.636581	0.5606	0.5724	0.5245	0.7988	0.6411	0.56	0.51	0.53	0.76	0.5823	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.802731	NA	NA	0.52093	0.751021	NA	0.341	NA	4.6695034
1185	2	182403851	182403851	G	A	exonic	CERKL	NA	synonymous SNV	CERKL:NM_001030312:exon9:c.C1167T:p.D389D,CERKL:NM_001030313:exon10:c.C1299T:p.D433D,CERKL:NM_001160277:exon12:c.C1452T:p.D484D,CERKL:NM_201548:exon12:c.C1506T:p.D502D,CERKL:NM_001030311:exon13:c.C1584T:p.D528D	exonic	ENSG00000188452	NA	synonymous SNV	ENSG00000188452:ENST00000374969:exon9:c.C1167T:p.D389D,ENSG00000188452:ENST00000374970:exon10:c.C1299T:p.D433D,ENSG00000188452:ENST00000409440:exon12:c.C1452T:p.D484D,ENSG00000188452:ENST00000410087:exon12:c.C1506T:p.D502D,ENSG00000188452:ENST00000339098:exon13:c.C1584T:p.D528D	Score=482;Name=lod=121	NA	2q31.3	Score=926;Name=V$AP1FJ_Q2	NA	NA	NA	rs10180793	0.99	0.99	0.986	0.991214	1	1	0.9971	0.9682	1	1	1	1	0.96	0.9975	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.918895	NA	NA	0.999767	0.980481	NA	0.993	NA	4.6693996
1185	6	37252210	37252210	C	T	exonic	TBC1D22B	NA	synonymous SNV	TBC1D22B:NM_017772:exon6:c.C771T:p.N257N	exonic	ENSG00000065491	NA	synonymous SNV	ENSG00000065491:ENST00000373491:exon6:c.C771T:p.N257N	Score=657;Name=lod=621	NA	6p21.2	NA	NA	NA	NA	rs3818136	0.68	0.68	0.694	0.697284	0.6551	0.8462	0.6787	0.5734	0.7679	0.66	0.88	0.63	0.53	0.6821	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.262616	1.262616	NA	0.660349	0.578756	NA	0.601	NA	4.6691176
1185	2	20491321	20491321	G	A	intronic	PUM2	NA	NA	NA	intronic	ENSG00000055917	NA	NA	NA	Score=329;Name=lod=29	NA	2p24.1	NA	NA	NA	NA	rs11896241	0.26	0.26	0.257	0.24401	0.331	0.2044	0.2795	0.1346	0.318	0.34	0.21	0.31	0.14	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.626496	NA	NA	NA	NA	NA	0.225	NA	4.669
1185	7	22862131	22862131	A	C	intronic	TOMM7	NA	NA	NA	intronic	ENSG00000196683	NA	NA	NA	NA	NA	7p15.3	NA	Name=Pol2,AP-2gamma,Ini1	NA	NA	rs2270108	0.5	0.5	0.515	0.523962	0.331	0.6528	0.3559	0.7118	0.455	0.35	0.66	0.34	0.68	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.031048	NA	NA	NA	NA	NA	0.471	NA	4.669
1185	7	22862183	22862183	G	A	intronic	TOMM7	NA	NA	NA	intronic	ENSG00000196683	NA	NA	NA	NA	NA	7p15.3	NA	Name=AP-2gamma,Ini1,Pol2	NA	NA	rs2270107	0.51	0.51	0.519	0.523762	0.331	0.6528	0.3559	0.7118	0.454	0.36	0.66	0.34	0.69	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.072634	NA	NA	NA	NA	NA	0.471	NA	4.669
1185	11	102166344	102166344	A	G	intergenic	YAP1,BIRC3	dist=62190;dist=21837	NA	NA	ncRNA_exonic	ENSG00000243777	NA	NA	NA	Score=800;Name=lod=2385	NA	11q22.2	NA	NA	NA	NA	rs17769417	0.33	0.33	0.325	0.336462	0.331	0.2748	0.3919	0.351	0.3466	0.31	0.33	0.4	0.32	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.760881	NA	NA	NA	NA	NA	0.312	NA	4.669
1185	17	73094407	73094407	C	T	intronic	SLC16A5	NA	NA	NA	intronic	ENSG00000170190	NA	NA	NA	NA	NA	17q25.1	NA	Name=GATA3_(SC-268)	NA	NA	rs7212311	0.24	0.24	0.2	0.232428	0.331	0.1706	0.2795	0.1467	0.2771	0.35	0.16	0.3	0.12	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.168366	NA	NA	NA	NA	NA	0.181	NA	4.669
1185	1	241798631	241798631	C	T	exonic	CHML	NA	synonymous SNV	CHML:NM_001821:exon1:c.G438A:p.S146S	exonic	ENSG00000203668	NA	synonymous SNV	ENSG00000203668:ENST00000366553:exon1:c.G438A:p.S146S	NA	NA	1q43	NA	NA	NA	NA	rs3737604	0.26	0.26	0.245	0.276558	0.3241	0.2232	0.2565	0.2254	0.3661	0.32	0.2	0.27	0.22	0.324	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.203827	NA	NA	0.349732	0.256695	ID=COSM146840;OCCURENCE=1(stomach)	0.203	NA	4.6688346
1185	6	30521137	30521137	G	A	exonic	GNL1	NA	synonymous SNV	GNL1:NM_005275:exon6:c.C798T:p.D266D	exonic	ENSG00000204590	NA	synonymous SNV	ENSG00000204590:ENST00000433809:exon5:c.C792T:p.D264D,ENSG00000204590:ENST00000376621:exon6:c.C798T:p.D266D	Score=381;Name=lod=47	NA	6p21.33	NA	NA	NA	NA	rs2074505	0.64	0.64	0.647	0.661142	0.667	0.621	0.5605	0.6641	0.7638	0.68	0.64	0.54	0.66	0.6704	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.222743	NA	NA	0.660945	0.664792	NA	0.717	NA	4.6683216
1185	10	99141205	99141205	A	G	exonic	RRP12	NA	synonymous SNV	RRP12:NM_001145114:exon10:c.T1173C:p.A391A,RRP12:NM_015179:exon12:c.T1356C:p.A452A	exonic	ENSG00000052749	NA	synonymous SNV	ENSG00000052749:ENST00000536831:exon6:c.T510C:p.A170A,ENSG00000052749:ENST00000315563:exon9:c.T1056C:p.A352A,ENSG00000052749:ENST00000414986:exon10:c.T1173C:p.A391A,ENSG00000052749:ENST00000370992:exon12:c.T1356C:p.A452A	NA	NA	10q24.1	NA	NA	NA	NA	rs2275089	0.37	0.37	0.369	0.404752	0.337	0.3125	0.3415	0.553	0.4141	0.33	0.28	0.33	0.58	0.3431	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.647431	NA	NA	0.318372	0.493872	NA	0.304	NA	4.6681946
1185	4	113709346	113709346	C	T	intergenic	LARP7,ANK2	dist=130598;dist=29893	NA	NA	ncRNA_exonic	ENSG00000241741	NA	NA	NA	Score=794;Name=lod=2244	NA	4q25	NA	NA	NA	NA	rs7662486	0.33	0.33	0.339	0.342452	0.332	0.3601	0.3415	0.3434	0.3344	0.32	0.35	0.32	0.34	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.160519	NA	NA	NA	NA	NA	0.319	NA	4.668
1185	10	28726025	28726025	G	A	intergenic	MPP7,WAC-AS1	dist=154958;dist=82821	NA	NA	ncRNA_intronic	ENSG00000237128	NA	NA	NA	Score=805;Name=lod=2496	NA	10p12.1	NA	NA	NA	NA	rs11007111	0.29	0.29	0.262	0.269169	0.332	0.3105	0.3602	0.1687	0.2331	0.33	0.31	0.36	0.15	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.131204	NA	NA	NA	NA	NA	0.254	NA	4.668
1185	15	90159575	90159575	T	C	intronic	TICRR	NA	NA	NA	intronic	ENSG00000140534	NA	NA	NA	NA	NA	15q26.1	NA	Name=MafF_(M8194),MafK_(ab50322)	NA	NA	rs56036125	0.27	0.27	0.26	0.277556	0.332	0.3968	0.2896	0.0832	0.3528	0.34	0.35	0.25	0.08	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.789882	1.789882	NA	NA	NA	NA	0.268	NA	4.668
1185	4	55161391	55161391	T	C	exonic	PDGFRA	NA	synonymous SNV	PDGFRA:NM_006206:exon23:c.T3222C:p.D1074D	exonic	ENSG00000134853,ENSG00000145216	NA	synonymous SNV	ENSG00000134853:ENST00000257290:exon23:c.T3222C:p.D1074D,ENSG00000145216:ENST00000507166:exon24:c.T2502C:p.D834D	Score=574;Name=lod=287	NA	4q12	Score=834;Name=V$PBX1_02	NA	NA	NA	rs7685117	1	1	0.997	0.997204	1	1	1	0.9894	1	1	1	1	0.99	0.999	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.026519	NA	NA	1	0.990468	NA	0.993	NA	4.6676666
1185	4	3221872	3221872	C	G	intronic	HTT	NA	NA	NA	intronic	ENSG00000197386	NA	NA	NA	NA	NA	4p16.3	NA	NA	Name=6	NA	rs362276	0.12	0.12	0.141	0.131589	0.1083	0.0248	0.0951	0.267	0.1084	0.11	0.03	0.09	0.27	0.1119	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.350534	NA	NA	0.112578	0.22619	NA	0.123	NA	4.667222
1185	6	32609061	32609061	T	A	intronic	HLA-DQA1	NA	NA	NA	intronic	ENSG00000196735	NA	NA	NA	NA	NA	6p21.32	NA	Name=Pol2-4H8	NA	NA	rs28654242	0.09	0.09	0.066	0.0746805	0.1292	0.0526	0.1095	0.059	0.0378	0.12	0.04	0.12	0.07	0.0909	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.734876	NA	NA	0.112689	0.076714	NA	0.167	NA	4.667211
1185	19	48244194	48244194	A	G	exonic	EHD2	NA	synonymous SNV	EHD2:NM_014601:exon6:c.A1137G:p.L379L	exonic	ENSG00000024422	NA	synonymous SNV	ENSG00000024422:ENST00000538399:exon5:c.A729G:p.L243L,ENSG00000024422:ENST00000263277:exon6:c.A1137G:p.L379L	Score=545;Name=lod=219	NA	19q13.33	NA	NA	NA	NA	rs7255434	0.52	0.52	0.464	0.498003	0.672	0.5605	0.5519	0.1346	0.7076	0.68	0.56	0.57	0.16	0.6293	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.215608	NA	NA	0.698256	0.239219	NA	0.572	NA	4.6671106
1185	4	113709293	113709293	G	A	intergenic	LARP7,ANK2	dist=130545;dist=29946	NA	NA	ncRNA_exonic	ENSG00000241741	NA	NA	NA	Score=794;Name=lod=2244	NA	4q25	NA	NA	NA	NA	rs7662801	0.33	0.33	0.32	0.342452	0.333	0.3601	0.3415	0.3427	0.3344	0.32	0.35	0.32	0.34	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.099696	NA	NA	NA	NA	NA	0.312	NA	4.667
1185	3	116545995	116545995	C	A	intergenic	LSAMP-AS3,NONE	dist=110108;dist=NONE	NA	NA	intronic	ENSG00000185565	NA	NA	NA	NA	NA	3q13.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.869588	NA	NA	NA	NA	NA	NA	NA	4.6666667
1185	6	167311362	167311362	C	T	intergenic	RPS6KA2,RNASET2	dist=35591;dist=31642	NA	NA	intronic	ENSG00000071242,ENSG00000249141	NA	NA	NA	NA	NA	6q27	NA	NA	NA	NA	NA	NA	NA	NA	0.000199681	NA	NA	NA	NA	0.001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.786518	NA	NA	NA	NA	NA	NA	NA	4.6666667
1185	17	44360744	44360744	T	C	intergenic	KANSL1,LRRC37A	dist=58004;dist=11753	NA	NA	intronic	ENSG00000228696	NA	NA	NA	Score=584;Name=lod=315	NA	17q21.31	NA	NA	NA	NA	rs2696513	NA	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.220267	NA	0.03	NA	NA	NA	0.022	NA	4.6666667
1185	1	111970541	111970541	T	A	upstream	OVGP1	NA	NA	NA	upstream	ENSG00000085465	NA	NA	NA	NA	NA	1p13.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.857023	NA	NA	NA	NA	NA	NA	NA	4.6666666
1185	1	111970554	111970554	A	C	upstream	OVGP1	NA	NA	NA	upstream	ENSG00000085465	NA	NA	NA	NA	NA	1p13.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.259291	NA	NA	NA	NA	NA	NA	NA	4.6666666
1185	2	89082422	89082422	A	G	ncRNA_exonic	ANKRD36BP2	NA	NA	NA	ncRNA_exonic	ENSG00000230006	NA	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs78593876	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.227633	NA	NA	NA	NA	NA	NA	NA	4.6666666
1185	2	89082520	89082520	G	A	ncRNA_intronic	ANKRD36BP2	NA	NA	NA	ncRNA_intronic	ENSG00000230006	NA	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs72930612	NA	NA	0.249	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.635906	NA	NA	NA	NA	NA	NA	NA	4.6666666
1185	2	96685085	96685085	G	A	ncRNA_intronic	FAHD2CP	NA	NA	NA	ncRNA_intronic	ENSG00000231584	NA	NA	NA	NA	NA	2q11.1	NA	NA	NA	NA	rs62155521	NA	NA	0.128	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.021483	NA	NA	NA	NA	NA	NA	NA	4.6666666
1185	2	96685092	96685092	A	G	ncRNA_intronic	FAHD2CP	NA	NA	NA	ncRNA_intronic	ENSG00000231584	NA	NA	NA	NA	NA	2q11.1	NA	NA	NA	NA	rs62155522	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.863676	NA	NA	NA	NA	NA	NA	NA	4.6666666
1185	2	130893888	130893888	T	C	ncRNA_intronic	CCDC74B-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000223760	NA	NA	NA	NA	NA	2q21.1	NA	NA	NA	NA	rs60354704	0.39	0.39	0.263	NA	NA	NA	NA	NA	NA	0.35	0.46	0.4	0.34	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.073323	NA	NA	NA	NA	NA	0.304	NA	4.6666666
1185	4	3578004	3578004	G	A	upstream	FLJ35424	NA	NA	NA	upstream	ENSG00000216560	NA	NA	NA	NA	NA	4p16.3	NA	NA	Name=2	NA	rs73199343	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.968241	NA	NA	NA	NA	NA	0.326	NA	4.6666666
1185	4	3578037	3578037	T	C	upstream	FLJ35424	NA	NA	NA	upstream	ENSG00000216560	NA	NA	NA	NA	NA	4p16.3	NA	NA	Name=2	NA	rs73792245	NA	NA	0.381	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.825638	NA	NA	NA	NA	NA	0.014	NA	4.6666666
1185	4	3578069	3578069	A	G	upstream	FLJ35424	NA	NA	NA	upstream	ENSG00000216560	NA	NA	NA	NA	NA	4p16.3	NA	NA	Name=2	NA	rs80271737	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.706422	NA	NA	NA	NA	NA	0.341	NA	4.6666666
1185	6	32523212	32523212	T	C	ncRNA_intronic	HLA-DRB6	NA	NA	NA	ncRNA_intronic	ENSG00000229391	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs77024104	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.087	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.153566	NA	NA	NA	NA	NA	0.101	NA	4.6666666
1185	6	32523256	32523256	C	T	ncRNA_intronic	HLA-DRB6	NA	NA	NA	ncRNA_intronic	ENSG00000229391	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs112320748	NA	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.054	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.421175	NA	NA	NA	NA	NA	0.058	NA	4.6666666
1185	7	76631451	76631451	G	A	ncRNA_intronic	DTX2P1-UPK3BP1-PMS2P11	NA	NA	NA	ncRNA_intronic	ENSG00000186704,ENSG00000265479	NA	NA	NA	NA	NA	7q11.23	NA	NA	NA	NA	rs28660402	NA	NA	0.557	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.065	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.683667	NA	NA	NA	NA	NA	0.043	NA	4.6666666
1185	8	12232201	12232201	A	C	ncRNA_intronic	FAM66A	NA	NA	NA	ncRNA_exonic	ENSG00000254423	NA	NA	NA	NA	NA	8p23.1	NA	NA	NA	NA	rs2684055	NA	NA	0.218	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.506927	NA	NA	NA	NA	NA	0.203	NA	4.6666666
1185	8	12236231	12236231	A	C	ncRNA_intronic	FAM66A	NA	NA	NA	ncRNA_exonic	ENSG00000255556	NA	NA	NA	NA	NA	8p23.1	NA	NA	NA	NA	rs58243878	NA	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.263843	NA	NA	NA	NA	NA	NA	NA	4.6666666
1185	8	12237588	12237588	G	A	ncRNA_intronic	FAM66A	NA	NA	NA	ncRNA_exonic	ENSG00000255556	NA	NA	NA	NA	NA	8p23.1	NA	NA	NA	NA	rs2739965	0.45	0.45	0.429	NA	NA	NA	NA	NA	NA	0.45	0.34	0.4	0.64	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.312534	NA	NA	NA	NA	NA	0.101	NA	4.6666666
1185	8	12237832	12237832	G	T	ncRNA_intronic	FAM66A	NA	NA	NA	ncRNA_intronic	ENSG00000227888	NA	NA	NA	NA	NA	8p23.1	NA	NA	NA	NA	rs2684052	NA	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.728373	NA	NA	NA	NA	NA	0.152	NA	4.6666666
1185	9	67285167	67285167	A	C	ncRNA_intronic	AQP7P1	NA	NA	NA	ncRNA_intronic	ENSG00000186466	NA	NA	NA	NA	NA	9q13	NA	NA	NA	NA	rs9286374	NA	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.508751	NA	NA	NA	NA	NA	NA	NA	4.6666666
1185	9	68428971	68428971	G	A	ncRNA_intronic	LOC642236	NA	NA	NA	ncRNA_intronic	ENSG00000215548	NA	NA	NA	NA	NA	9q13	NA	NA	NA	NA	rs62543295	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.24154	NA	NA	NA	NA	NA	NA	NA	4.6666666
1185	11	124439844	124439844	A	G	upstream	OR8A1	NA	NA	NA	upstream	ENSG00000196119	NA	NA	NA	NA	NA	11q24.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.592896	NA	NA	NA	NA	NA	NA	NA	4.6666666
1185	12	8386878	8386878	C	T	ncRNA_exonic	FAM86FP	NA	NA	NA	ncRNA_exonic	ENSG00000164845	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs10841037	0.52	0.52	0.447	NA	NA	NA	NA	NA	NA	0.67	0.47	0.51	0.37	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.447547	NA	NA	NA	NA	NA	0.022	NA	4.6666666
1185	12	9464133	9464133	C	G	ncRNA_intronic	LOC642846	NA	NA	NA	ncRNA_intronic	ENSG00000111788	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs10843383	0.41	0.41	0.344	NA	NA	NA	NA	NA	NA	0.48	0.27	0.49	0.42	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.233161	1.233161	NA	NA	NA	NA	0.014	NA	4.6666666
1185	15	20495408	20495408	G	A	ncRNA_exonic	CHEK2P2	NA	NA	NA	ncRNA_exonic	ENSG00000259156	NA	NA	NA	NA	NA	15q11.1	NA	NA	NA	NA	rs2954587	NA	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.065096	NA	NA	NA	NA	NA	0.232	NA	4.6666666
1185	15	21937658	21937658	C	T	ncRNA_exonic	LOC646214	NA	NA	NA	ncRNA_exonic	ENSG00000237161	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs28502402	NA	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.89987	NA	NA	NA	NA	NA	0.232	NA	4.6666666
1185	15	21938049	21938049	C	T	ncRNA_exonic	LOC646214	NA	NA	NA	ncRNA_exonic	ENSG00000237161	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs2343906	NA	NA	0.849	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.172928	2.172928	NA	NA	NA	NA	0.928	NA	4.6666666
1185	15	21938082	21938082	G	A	ncRNA_exonic	LOC646214	NA	NA	NA	ncRNA_exonic	ENSG00000237161	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs28655354	NA	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.465367	NA	NA	NA	NA	NA	0.217	NA	4.6666666
1185	15	22140512	22140512	A	C	ncRNA_intronic	NF1P2	NA	NA	NA	ncRNA_intronic	ENSG00000258997	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs2626255	NA	NA	0.773	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.169694	NA	NA	NA	NA	NA	0.435	NA	4.6666666
1185	15	22298230	22298230	A	T	ncRNA_intronic	LOC727924	NA	NA	NA	ncRNA_exonic	ENSG00000258721	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs8036276	NA	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.422661	NA	NA	NA	NA	ID=COSN164864;OCCURENCE=1(NS)	0.065	NA	4.6666666
1185	15	22298578	22298578	G	T	ncRNA_intronic	LOC727924	NA	NA	NA	ncRNA_intronic	ENSG00000259176	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs66476406	NA	NA	0.299	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.862273	NA	NA	NA	NA	NA	0.225	NA	4.6666666
1185	16	33500743	33500743	T	C	ncRNA_intronic	RNU6-76P	NA	NA	NA	ncRNA_intronic	ENSG00000260518	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs3888934	NA	NA	0.249	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.442273	NA	NA	NA	NA	NA	NA	NA	4.6666666
1185	18	14183840	14183840	T	A	ncRNA_intronic	ANKRD20A5P	NA	NA	NA	ncRNA_intronic	ENSG00000186481	NA	NA	NA	NA	NA	18p11.21	NA	NA	NA	NA	rs62085007	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.487313	NA	NA	NA	NA	NA	NA	NA	4.6666666
1185	19	10163380	10163380	G	A	ncRNA_intronic	C3P1	NA	NA	NA	ncRNA_intronic	ENSG00000167798	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs73922311	0.01	0.01	0.012	0.0131789	NA	NA	0.0014	0.0492	NA	NA	NA	0.0028	0.05	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.414853	NA	NA	NA	NA	NA	0.014	NA	4.6666666
1185	19	15882763	15882763	T	G	ncRNA_intronic	CYP4F24P	NA	NA	NA	ncRNA_intronic	ENSG00000267594	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs3752147	0.86	0.86	0.818	NA	NA	NA	NA	NA	NA	0.82	0.92	0.84	0.85	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.099324	NA	NA	NA	NA	NA	0.783	NA	4.6666666
1185	21	14418486	14418486	T	C	ncRNA_intronic	ANKRD30BP2	NA	NA	NA	ncRNA_exonic	ENSG00000224309	NA	NA	NA	NA	NA	21q11.2	NA	NA	NA	NA	rs2821621	NA	NA	0.451	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.558508	NA	NA	NA	NA	NA	NA	NA	4.6666666
1185	X	1531457	1531457	C	T	ncRNA_intronic	ASMTL-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000236017	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs5989842	0.39	0.39	0.38394	NA	NA	NA	NA	NA	NA	0.42	0.37	0.4	0.37	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.464412	NA	NA	NA	NA	NA	0.442	NA	4.6666666
1185	X	1531838	1531838	A	G	ncRNA_exonic	ASMTL-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000236017	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs5949005	0.42	0.42	0.4213	NA	NA	NA	NA	NA	NA	0.45	0.41	0.43	0.4	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.276581	NA	NA	NA	NA	NA	0.464	NA	4.6666666
1185	6	144093352	144093352	C	T	intronic	PHACTR2	NA	NA	NA	intronic	ENSG00000112419	NA	NA	NA	NA	NA	6q24.2	NA	NA	Name=20	NA	rs1018463	0.22	0.22	0.208	0.205671	0.1004	0.4018	0.1873	0.1694	0.1738	0.11	0.41	0.19	0.18	0.1441	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.438612	NA	NA	0.089026	0.163091	NA	0.174	NA	4.666474
1185	19	54201750	54201750	A	T	downstream	MIR523,MIR525	NA	NA	NA	downstream	ENSG00000207711,ENSG00000208016	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0002	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.680494	NA	NA	NA	NA	NA	NA	NA	4.6664666
1185	6	39196662	39196662	C	A	intronic	KCNK5	NA	NA	NA	intronic	ENSG00000164626	NA	NA	NA	NA	NA	6p21.2	NA	Name=BCL3	NA	NA	rs2241595	0.2	0.2	0.175	0.212859	0.1004	0.3105	0.1095	0.2859	0.2025	0.1	0.33	0.12	0.25	0.1421	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.327228	1.327228	NA	0.091279	0.249433	NA	0.109	NA	4.666221
1185	2	76334174	76334174	T	G	intergenic	GCFC2,LRRTM4	dist=396063;dist=640676	NA	NA	ncRNA_exonic	ENSG00000233107	NA	NA	NA	Score=761;Name=lod=1646	NA	2p12	NA	NA	NA	NA	rs317294	0.24	0.24	0.244	0.233626	0.334	0.2222	0.3098	0.0575	0.3262	0.35	0.22	0.27	0.06	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.196965	NA	NA	NA	NA	NA	0.312	NA	4.666
1185	10	72633458	72633458	C	T	intronic	SGPL1	NA	NA	NA	intronic	ENSG00000166224	NA	NA	NA	NA	NA	10q22.1	NA	NA	Name=2	NA	rs10762410	0.36	0.36	0.337	0.379193	0.334	0.4831	0.4078	0.2262	0.5051	0.35	0.46	0.39	0.23	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.265124	NA	NA	NA	NA	NA	0.362	NA	4.666
1185	10	72633502	72633502	C	T	intronic	SGPL1	NA	NA	NA	intronic	ENSG00000166224	NA	NA	NA	NA	NA	10q22.1	NA	NA	Name=2	NA	rs10823632	0.36	0.36	0.321	0.378994	0.334	0.4831	0.4078	0.2254	0.5051	0.35	0.46	0.39	0.23	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.343003	NA	NA	NA	NA	NA	0.355	NA	4.666
1185	15	89111610	89111610	G	A	intergenic	DET1,MIR1179	dist=21698;dist=39728	NA	NA	ncRNA_exonic	ENSG00000259569	NA	NA	NA	Score=369;Name=lod=42	NA	15q26.1	NA	NA	NA	NA	rs17197194	0.28	0.28	0.271	0.246406	0.334	0.2183	0.2104	0.2564	0.1973	0.33	0.24	0.27	0.27	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.767823	NA	NA	NA	NA	NA	0.283	NA	4.666
1185	17	16832577	16832577	A	G	intergenic	KRT16P2,TNFRSF13B	dist=96430;dist=9821	NA	NA	ncRNA_exonic	ENSG00000128438	NA	NA	NA	NA	NA	17p11.2	NA	NA	Name=2	NA	rs3794774	0.42	0.42	0.414	0.424321	0.334	0.497	0.3948	0.4758	0.3937	0.33	0.49	0.4	0.5	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.092016	NA	NA	NA	NA	NA	0.355	NA	4.666
1185	19	44977382	44977382	C	T	intergenic	ZNF229,ZNF180	dist=24717;dist=2477	NA	NA	ncRNA_exonic	ENSG00000176761	NA	NA	NA	NA	NA	19q13.31	NA	NA	Name=2	NA	rs1897822	0.25	0.25	0.235	0.261981	0.334	0.0813	0.2478	0.4251	0.1636	0.3	0.08	0.24	0.37	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.154831	NA	NA	NA	NA	NA	0.312	NA	4.666
1185	1	6204222	6204222	C	G	intronic	CHD5	NA	NA	NA	intronic	ENSG00000116254	NA	NA	NA	Score=486;Name=lod=126	NA	1p36.31	NA	NA	NA	NA	rs17489787	0.13	0.13	0.13	0.166933	0.0944	0.1359	0.1326	0.1967	0.2577	0.11	0.12	0.14	0.17	0.1376	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.153844	NA	NA	0.102093	0.210168	NA	0.167	NA	4.665907
1185	9	116840338	116840338	C	T	intronic	AMBP	NA	NA	NA	intronic	ENSG00000106927	NA	NA	NA	NA	NA	9q32	NA	NA	Name=9	NA	rs2285056	0.09	0.09	0.091	0.102436	0.0984	0.0387	0.072	0.0802	0.2239	0.11	0.04	0.08	0.11	0.1151	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.206262	NA	NA	0.120814	0.074217	NA	0.116	NA	4.665686
1185	2	131946145	131946145	C	G	intergenic	PLEKHB2,POTEE	dist=38720;dist=29779	NA	NA	intronic	ENSG00000115762	NA	NA	NA	NA	NA	2q21.1	NA	NA	NA	NA	NA	NA	NA	NA	0.000199681	0.001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.624144	NA	NA	NA	NA	NA	NA	NA	4.6656667
1185	19	22785566	22785566	C	T	ncRNA_intronic	LOC440518	NA	NA	NA	ncRNA_exonic	ENSG00000221790	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs28462025	0.03	0.03	0.03	0.038139	0.001	NA	0.0058	0.1407	NA	0.0013	NA	0.01	0.13	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.9223	NA	NA	NA	NA	NA	0.08	NA	4.6656666
1185	1	24859617	24859617	G	A	exonic	RCAN3	NA	synonymous SNV	RCAN3:NM_001251980:exon3:c.G384A:p.P128P,RCAN3:NM_001251981:exon3:c.G240A:p.P80P,RCAN3:NM_001251983:exon3:c.G39A:p.P13P,RCAN3:NM_001251984:exon3:c.G39A:p.P13P,RCAN3:NM_001251977:exon4:c.G414A:p.P138P,RCAN3:NM_001251978:exon4:c.G414A:p.P138P,RCAN3:NM_001251979:exon4:c.G414A:p.P138P,RCAN3:NM_013441:exon4:c.G414A:p.P138P	exonic	ENSG00000117602	NA	synonymous SNV	ENSG00000117602:ENST00000538532:exon2:c.G240A:p.P80P,ENSG00000117602:ENST00000374395:exon4:c.G414A:p.P138P,ENSG00000117602:ENST00000436717:exon4:c.G384A:p.P128P	NA	NA	1p36.11	NA	NA	NA	NA	rs196429	0.41	0.41	0.395	0.383586	0.3221	0.6786	0.3314	0.2458	0.3661	0.34	0.68	0.31	0.28	0.3597	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.130342	NA	NA	0.319419	0.266682	NA	0.254	NA	4.6654476
1185	1	240307389	240307389	C	G	intronic	FMN2	NA	NA	NA	ncRNA_exonic	ENSG00000228818	NA	NA	NA	Score=897;Name=lod=5865	NA	1q43	NA	NA	NA	NA	rs2355833	0.64	0.64	0.65	0.696685	0.668	0.5198	0.5922	0.9123	0.6912	0.66	0.46	0.58	0.88	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.406507	NA	NA	NA	NA	ID=COSN163494;OCCURENCE=1(breast)	0.696	NA	4.6653333
1185	19	42558629	42558629	G	A	intronic	GRIK5	NA	NA	NA	intronic	ENSG00000105737	NA	NA	NA	NA	NA	19q13.2	NA	Name=Sin3Ak-20,Egr-1,E2F6,NRSF,E2F6_(H-50)	NA	NA	rs3736109	0.09	0.09	0.07	0.0892572	0.1024	0.0962	0.1182	0.0098	0.1554	0.1	0.1	0.14	0.01	0.1181	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.703605	NA	NA	0.114186	0.022696	NA	0.072	NA	4.665314
1185	19	39826597	39826597	A	G	intronic	GMFG	NA	NA	NA	intronic	ENSG00000130755	NA	NA	NA	NA	NA	19q13.2	NA	Name=Pol2-4H8,ZBTB7A_(SC-34508),ETS1,TAF1,GABP,PU.1,Pol2	NA	NA	rs251905	0.17	0.17	0.166	0.184704	0.1123	0.0556	0.0994	0.4644	0.0746	0.11	0.06	0.11	0.44	0.1229	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.310884	NA	NA	0.099651	0.417385	NA	0.283	NA	4.665149
1185	19	40172637	40172637	G	A	ncRNA_splicing	LGALS17A	NR_034156:exon3:c.139-1G>A	NA	NA	ncRNA_splicing	ENSG00000226025	ENST00000455832:exon3:c.139-1G>A,ENST00000412609:exon3:c.139-1G>A,ENST00000598736:exon3:c.120-1G>A,ENST00000598304:exon2:c.43-1G>A,ENST00000598164:exon2:c.78-1G>A	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs10410370	0.03	0.03	0.042	0.0275559	0.001	NA	0.013	0.0968	NA	0.0013	NA	0.01	0.13	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.08525	NA	NA	0.000629	0.109104	NA	0.007	NA	4.6650376
1186	1	238655389	238655389	G	T	intergenic	LOC339535,CHRM3	dist=6072;dist=1136984	NA	NA	ncRNA_exonic	ENSG00000215149	NA	NA	NA	Score=554;Name=lod=238	NA	1q43	NA	NA	NA	NA	rs2392862	0.22	0.22	0.214	0.199281	0.335	0.2034	0.2594	0.0514	0.2127	0.34	0.2	0.27	0.05	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.223993	NA	NA	NA	NA	NA	0.319	NA	4.665
1186	7	88195330	88195330	G	A	intergenic	STEAP4,ZNF804B	dist=259102;dist=193423	NA	NA	ncRNA_exonic	ENSG00000228928	NA	NA	NA	Score=425;Name=lod=71	NA	7q21.12	NA	NA	NA	NA	rs6952109	0.27	0.27	0.264	0.304712	0.335	0.2282	0.304	0.1982	0.4969	0.33	0.21	0.29	0.23	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.982227	NA	NA	NA	NA	NA	0.275	NA	4.665
1186	10	99125769	99125769	T	C	intronic	RRP12	NA	NA	NA	intronic	ENSG00000052749	NA	NA	NA	NA	NA	10q24.1	NA	NA	Name=8	NA	rs11189168	0.38	0.38	0.39	0.416733	0.335	0.3105	0.3501	0.5998	0.41	0.33	0.28	0.34	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.158424	NA	NA	NA	NA	NA	0.341	NA	4.665
1186	2	98341728	98341728	C	G	intronic	ZAP70	NA	NA	NA	intronic	ENSG00000115085	NA	NA	NA	NA	NA	2q11.2	NA	NA	Name=5	NA	rs2289918	0.19	0.19	0.2	0.182508	0.1093	0.1438	0.1254	0.3805	0.0706	0.1	0.17	0.13	0.39	0.1208	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.526413	NA	NA	0.105233	0.33931	NA	0.181	NA	4.664667
1186	19	45434145	45434145	T	C	ncRNA_intronic	APOC1P1	NA	NA	NA	ncRNA_intronic	ENSG00000214855	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs192165948	0.0023	0.0023	NA	0.000798722	0.002	NA	0.0029	NA	NA	0.0026	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.281474	NA	NA	NA	NA	NA	NA	NA	4.6646666
1186	9	123673890	123673890	G	C	intronic	TRAF1	NA	NA	NA	intronic	ENSG00000056558	NA	NA	NA	NA	NA	9q33.2	NA	Name=CTCF,Pol2-4H8	NA	NA	rs7021880	0.27	0.27	0.259	0.242013	0.336	0.2758	0.2839	0.1634	0.1871	0.33	0.28	0.27	0.17	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.334807	NA	NA	NA	NA	NA	0.341	NA	4.664
1186	15	79023415	79023415	T	C	intergenic	CHRNB4,LOC646938	dist=89828;dist=20964	NA	NA	ncRNA_exonic	ENSG00000261303	NA	NA	NA	Score=577;Name=lod=296	NA	15q25.1	NA	NA	NA	NA	rs34067845	0.19	0.19	0.179	0.185903	0.336	0.1002	0.1556	0.0673	0.3016	0.34	0.09	0.18	0.09	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.794794	NA	NA	NA	NA	NA	0.196	NA	4.664
1186	14	105609335	105609335	A	G	exonic	JAG2	NA	synonymous SNV	JAG2:NM_145159:exon25:c.T3300C:p.I1100I,JAG2:NM_002226:exon26:c.T3414C:p.I1138I	exonic	ENSG00000184916	NA	synonymous SNV	ENSG00000184916:ENST00000347004:exon25:c.T3300C:p.I1100I,ENSG00000184916:ENST00000331782:exon26:c.T3414C:p.I1138I	NA	NA	14q32.33	Score=855;Name=V$SOX9_B1	NA	NA	NA	rs10149229	0.69	0.69	0.718	0.689896	0.66	0.5337	0.6571	0.8941	0.6288	0.67	0.57	0.65	0.87	0.6666	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.242386	NA	NA	0.676415	0.846278	NA	0.616	NA	4.6636516
1186	12	62274139	62274139	A	G	intronic	FAM19A2	NA	NA	NA	ncRNA_exonic	ENSG00000257528	NA	NA	NA	Score=652;Name=lod=593	NA	12q14.1	NA	NA	NA	NA	rs7311950	0.75	0.75	0.731	0.772364	0.67	0.7917	0.7565	0.8343	0.7853	0.68	0.77	0.73	0.85	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.013872	NA	NA	NA	NA	NA	0.775	NA	4.6633333
1186	1	246021941	246021941	T	C	exonic	SMYD3	NA	synonymous SNV	SMYD3:NM_001167740:exon10:c.A933G:p.A311A,SMYD3:NM_022743:exon10:c.A756G:p.A252A	exonic	ENSG00000185420	NA	synonymous SNV	ENSG00000185420:ENST00000391836:exon7:c.A366G:p.A122A,ENSG00000185420:ENST00000388985:exon10:c.A933G:p.A311A,ENSG00000185420:ENST00000490107:exon10:c.A756G:p.A252A,ENSG00000185420:ENST00000541742:exon10:c.A756G:p.A252A	NA	NA	1q44	Score=802;Name=V$COMP1_01	NA	NA	NA	rs2362587	0.46	0.46	0.41	0.389377	0.7177	0.1925	0.5173	0.2224	0.3896	0.72	0.22	0.58	0.24	0.5672	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.746372	NA	NA	0.718488	0.289151	NA	0.42	NA	4.6632786
1186	11	36103228	36103228	A	G	exonic	LDLRAD3	NA	synonymous SNV	LDLRAD3:NM_174902:exon3:c.A219G:p.P73P	exonic	ENSG00000179241	NA	synonymous SNV	ENSG00000179241:ENST00000524419:exon2:c.A72G:p.P24P,ENSG00000179241:ENST00000528989:exon2:c.A72G:p.P24P,ENSG00000179241:ENST00000315571:exon3:c.A219G:p.P73P	NA	NA	11p13	NA	NA	NA	NA	rs1138807	0.35	0.35	0.341	0.341054	0.3151	0.3522	0.402	0.41	0.2198	0.32	0.35	0.38	0.38	0.3511	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.932554	NA	NA	0.33725	0.388738	NA	0.457	NA	4.6632166
1186	19	1014398	1014398	A	G	exonic	TMEM259	NA	synonymous SNV	TMEM259:NM_001033026:exon2:c.T300C:p.H100H,TMEM259:NM_033420:exon2:c.T300C:p.H100H	exonic	ENSG00000182087	NA	synonymous SNV	ENSG00000182087:ENST00000333175:exon2:c.T300C:p.H100H,ENSG00000182087:ENST00000356663:exon2:c.T300C:p.H100H	Score=485;Name=lod=125	NA	19p13.3	NA	NA	NA	NA	rs7146	0.64	0.64	0.668	0.67512	0.6799	0.5308	0.5231	0.8154	0.7372	0.68	0.5	0.57	0.8	0.6579	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.055416	NA	NA	0.665969	0.794825	NA	0.717	NA	4.6628976
1186	19	3738649	3738649	A	C	exonic	TJP3	NA	synonymous SNV	TJP3:NM_001267560:exon12:c.A1381C:p.R461R,TJP3:NM_001267561:exon12:c.A1408C:p.R470R	exonic	ENSG00000105289	NA	synonymous SNV	ENSG00000105289:ENST00000262968:exon11:c.A1480C:p.R494R,ENSG00000105289:ENST00000539908:exon11:c.A1273C:p.R425R,ENSG00000105289:ENST00000587686:exon11:c.A1438C:p.R480R,ENSG00000105289:ENST00000382008:exon12:c.A1423C:p.R475R,ENSG00000105289:ENST00000541714:exon12:c.A1381C:p.R461R,ENSG00000105289:ENST00000589378:exon12:c.A1408C:p.R470R	Score=464;Name=lod=103	NA	19p13.3	NA	NA	NA	NA	rs599587	0.7	0.7	0.693	0.705272	0.665	0.6181	0.8098	0.7451	0.7086	0.65	0.67	0.79	0.74	0.6782	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.291381	NA	NA	0.660698	0.739219	NA	0.746	NA	4.6627686
1186	15	86287910	86287910	C	T	UTR3	AKAP13	NM_006738:c.*2C>T,NM_007200:c.*2C>T,NM_001270546:c.*2C>T	NA	NA	ncRNA_exonic	ENSG00000259407	NA	NA	NA	NA	NA	15q25.3	NA	Name=Pol2	NA	NA	rs11073517	0.22	0.22	0.206	0.206669	0.2704	0.2153	0.317	0.1384	0.1462	0.27	0.16	0.28	0.17	0.2634	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.045376	2.045376	NA	0.303792	0.17257	NA	0.109	NA	4.662408
1186	19	49388654	49388654	C	A	intronic	TULP2	NA	NA	NA	intronic	ENSG00000104804	NA	NA	NA	NA	NA	19q13.33	NA	NA	Name=2	NA	rs3826818	0.18	0.18	0.192	0.185304	0.1004	0.1171	0.1066	0.3873	0.1258	0.11	0.14	0.12	0.38	0.1344	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.082861	NA	NA	0.102907	0.374716	NA	0.174	NA	4.662293
1186	5	157031881	157031881	C	T	intergenic	ADAM19,SOX30	dist=29098;dist=20806	NA	NA	ncRNA_exonic	ENSG00000254336	NA	NA	NA	Score=678;Name=lod=756	NA	5q33.3	NA	NA	NA	NA	rs13358963	0.35	0.35	0.351	0.35643	0.338	0.1121	0.4207	0.6127	0.2352	0.33	0.11	0.42	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.366123	NA	NA	NA	NA	NA	0.377	NA	4.662
1186	19	44977405	44977405	C	T	intergenic	ZNF229,ZNF180	dist=24740;dist=2454	NA	NA	ncRNA_exonic	ENSG00000176761	NA	NA	NA	NA	NA	19q13.31	NA	NA	Name=2	NA	rs1897821	0.18	0.18	0.157	0.161342	0.338	0.004	0.1715	0.1437	0.1585	0.34	0.01	0.17	0.13	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.761834	NA	NA	NA	NA	NA	0.246	NA	4.662
1186	18	44601611	44601611	A	G	intronic	KATNAL2	NA	NA	NA	intronic	ENSG00000167216	NA	NA	NA	NA	NA	18q21.1	NA	Name=Pol2,c-Jun,STAT3	Name=33	NA	rs3816125	0.31	0.31	0.295	0.292133	0.4632	0.1766	0.2378	0.2307	0.3569	0.47	0.19	0.28	0.23	0.417	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.593359	NA	NA	0.458013	0.278938	NA	0.341	NA	4.661787
1186	9	21278400	21278400	C	T	ncRNA_exonic	IFNA22P	NA	NA	NA	ncRNA_exonic	ENSG00000224416	NA	NA	NA	NA	NA	9p21.3	NA	NA	NA	NA	rs148310510	0.0041	0.0041	0.003	0.00359425	0.005	NA	0.0115	0.0015	0.0031	0.004	NA	0.01	0.0041	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.176548	NA	NA	NA	NA	NA	NA	NA	4.6616666
1186	11	113264470	113264470	A	C	exonic	ANKK1	NA	synonymous SNV	ANKK1:NM_178510:exon2:c.A453C:p.I151I	exonic	ENSG00000170209	NA	synonymous SNV	ENSG00000170209:ENST00000303941:exon2:c.A453C:p.I151I	Score=497;Name=lod=139	NA	11q23.2	NA	NA	NA	NA	rs4938013	0.67	0.67	0.676	0.660543	0.6799	0.5546	0.6095	0.8079	0.5869	0.68	0.58	0.62	0.8	0.6478	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.723029	NA	NA	0.677676	0.791531	NA	0.63	NA	4.6612906
1186	17	65714232	65714232	C	G	intronic	NOL11	NA	NA	NA	intronic	ENSG00000130935	NA	NA	NA	NA	NA	17q24.2	NA	Name=ETS1,Pol2,NFKB,Pol2(b),HA-E2F1,Pol2-4H8	NA	NA	rs3760224	0.14	0.14	0.14	0.118011	0.1213	0.1567	0.0965	0.1437	0.0552	0.13	0.16	0.09	0.18	0.1113	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.75484	NA	NA	0.106395	0.141852	ID=COSN165513;OCCURENCE=1(NS)	0.152	NA	4.661005
1186	12	52627568	52627568	A	T	intronic	KRT7	NA	NA	NA	intronic	ENSG00000135480	NA	NA	NA	NA	NA	12q13.13	NA	NA	Name=13	NA	rs36053378	0.26	0.26	0.237	0.258187	0.339	0.2837	0.33	0.1241	0.2791	0.33	0.26	0.31	0.13	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.007225	NA	NA	NA	NA	NA	0.167	NA	4.661
1186	17	3533412	3533412	G	A	intronic	SHPK	NA	NA	NA	intronic	ENSG00000197417,ENSG00000262304	NA	NA	NA	NA	NA	17p13.2	Score=827;Name=V$ER_Q6	NA	NA	NA	rs9913319	0.2	0.2	0.198	0.193091	0.339	0.002	0.1801	0.233	0.1953	0.34	NA	0.21	0.22	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.803261	NA	NA	NA	NA	NA	0.261	NA	4.661
1186	4	57190242	57190242	T	C	intronic	KIAA1211	NA	NA	NA	intronic	ENSG00000109265	NA	NA	NA	NA	NA	4q12	NA	Name=Egr-1	NA	NA	rs2292983	0.22	0.22	0.211	0.21845	0.1044	0.4325	0.0951	0.2315	0.1851	0.1	0.45	0.11	0.24	0.1499	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.887765	NA	NA	0.084868	0.180441	NA	0.225	NA	4.660832
1186	8	12236101	12236101	G	A	ncRNA_intronic	FAM66A	NA	NA	NA	ncRNA_intronic	ENSG00000227888	NA	NA	NA	NA	NA	8p23.1	NA	NA	NA	NA	rs139689025	0.01	0.01	0.008	0.00439297	0.006	0.001	0.0014	0.0106	NA	0.01	0.0017	NA	0.02	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.014844	NA	NA	NA	NA	NA	NA	NA	4.6606666
1186	7	130008159	130008159	A	G	intronic	CPA5	NA	NA	NA	intronic	ENSG00000158525	NA	NA	NA	NA	NA	7q32.2	NA	NA	Name=3	NA	rs2302823	0.36	0.36	0.312	0.357029	0.34	0.4177	0.4957	0.2995	0.2914	0.34	0.42	0.45	0.27	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.001781	NA	NA	NA	NA	NA	0.239	NA	4.66
1186	14	106800341	106800341	G	T	intergenic	LINC00226,LINC00221	dist=55375;dist=138114	NA	NA	ncRNA_exonic	ENSG00000253587	NA	NA	NA	Score=333;Name=lod=30	NA	14q32.33	NA	NA	NA	NA	rs35061373	NA	NA	0.298	0.484824	0.34	0.4177	0.3746	0.7216	0.4611	NA	NA	NA	NA	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.875125	NA	NA	NA	NA	ID=COSN393112;OCCURENCE=1(lung)	0.326	NA	4.66
1186	16	5132472	5132472	C	T	intronic	ALG1	NA	NA	NA	intronic	ENSG00000033011	NA	NA	NA	NA	NA	16p13.3	Score=842;Name=V$OCT1_Q6	NA	NA	NA	rs4786592	0.24	0.24	0.223	0.189297	0.34	0.1329	0.3372	0.0915	0.1196	0.35	0.14	0.36	0.11	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.566097	NA	NA	NA	NA	ID=COSN165101;OCCURENCE=1(NS)	0.283	NA	4.66
1186	20	37570475	37570475	G	A	intronic	FAM83D	NA	NA	NA	intronic	ENSG00000101447	NA	NA	NA	NA	NA	20q11.23	NA	Name=HNF4A,CTCF	NA	NA	rs3752292	0.4	0.4	0.413	0.388179	0.34	0.4226	0.3818	0.4841	0.2771	0.35	0.36	0.37	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.503245	NA	NA	NA	NA	NA	0.341	NA	4.66
1186	14	106866822	106866822	C	G	intergenic	LINC00226,LINC00221	dist=121856;dist=71633	NA	NA	exonic	ENSG00000211958	NA	nonsynonymous SNV	ENSG00000211958:ENST00000390618:exon1:c.G35C:p.G12A	NA	NA	14q32.33	NA	NA	NA	NA	rs113233536	NA	NA	0.162	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.1735	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.971825	NA	1	NA	NA	NA	0.123	NA	4.6598334
1186	14	106866668	106866668	C	A	intergenic	LINC00226,LINC00221	dist=121702;dist=71787	NA	NA	exonic	ENSG00000211958	NA	nonsynonymous SNV	ENSG00000211958:ENST00000390618:exon2:c.G86T:p.G29V	NA	NA	14q32.33	NA	NA	NA	NA	rs112298109	NA	NA	0.096	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.174	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.230651	NA	0.02	NA	NA	ID=COSN229346;OCCURENCE=2(skin)	NA	NA	4.6593334
1186	12	8023500	8023500	A	G	intronic	SLC2A14	NA	NA	NA	ncRNA_exonic	ENSG00000255885	NA	NA	NA	Score=750;Name=lod=1496	NA	12p13.31	NA	NA	NA	NA	rs12372273	0.77	0.77	0.76	0.76877	0.674	0.9623	0.7392	0.7179	0.7566	0.69	0.97	0.71	0.71	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.120007	NA	NA	NA	NA	NA	0.783	NA	4.6593333
1186	7	1132505	1132505	G	A	UTR3	GPER	NM_001505:c.*13G>A,NM_001039966:c.*13G>A,NM_001098201:c.*13G>A	NA	NA	UTR3	ENSG00000164850	ENST00000401670:c.*13G>A,ENST00000397092:c.*13G>A,ENST00000297469:c.*13G>A,ENST00000397088:c.*13G>A	NA	NA	NA	NA	7p22.3	NA	NA	Name=10	NA	rs2070118	0.14	0.14	0.138	0.128994	0.2028	0.0198	0.2104	0.0673	0.1912	0.22	0.02	0.19	0.11	0.2314	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.168788	NA	NA	0.239995	0.088516	NA	0.203	NA	4.6591384
1186	21	35896032	35896032	A	G	intronic	RCAN1	NA	NA	NA	UTR5	ENSG00000159200	ENST00000482533:c.-177T>C	NA	NA	NA	NA	21q22.12	NA	NA	Name=3	NA	rs6517239	0.14	0.14	0.142	0.172125	0.1779	0.1379	0.1297	0.1369	0.2791	0.17	0.12	0.11	0.16	0.1683	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.24913	1.24913	NA	0.161744	0.152519	NA	0.109	NA	4.6587227
1186	3	153741637	153741637	A	C	downstream	ARHGEF26-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000240068	NA	NA	NA	Score=726;Name=lod=1190	NA	3q25.2	NA	NA	NA	NA	rs7611942	0.42	0.42	0.424	0.405551	0.508	0.2738	0.4092	0.4682	0.3487	0.51	0.27	0.4	0.46	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.681116	NA	NA	NA	NA	NA	0.493	NA	4.6586666
1186	2	171916495	171916495	C	A	intronic	TLK1	NA	NA	NA	exonic	ENSG00000198586	NA	synonymous SNV	ENSG00000198586:ENST00000453628:exon3:c.G120T:p.G40G,ENSG00000198586:ENST00000360843:exon5:c.G408T:p.G136G	NA	NA	2q31.1	NA	NA	NA	NA	rs3821087	0.05	0.05	0.041	0.0599042	0.0487	0.1002	0.0447	0.0008	0.1207	0.05	0.09	0.04	NA	0.0634	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.065586	NA	NA	0.062783	0.013699	NA	0.029	NA	4.6584503
1186	12	8023598	8023598	A	T	intronic	SLC2A14	NA	NA	NA	ncRNA_exonic	ENSG00000255885	NA	NA	NA	Score=750;Name=lod=1496	NA	12p13.31	NA	NA	NA	NA	rs12372284	0.77	0.77	0.763	0.769169	0.675	0.9623	0.7392	0.7186	0.7566	0.69	0.97	0.71	0.71	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.258757	NA	NA	NA	NA	NA	0.768	NA	4.6583333
1186	15	78189206	78189206	C	T	intergenic	LOC253044,LOC645752	dist=247625;dist=17353	NA	NA	ncRNA_exonic	ENSG00000260139	NA	NA	NA	Score=346;Name=lod=34	NA	15q24.3	NA	NA	NA	NA	rs4886959	0.23	0.23	0.224	0.189696	0.3419	0.1478	0.2522	0.0772	0.184	0.34	0.16	0.28	0.1	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.099793	NA	NA	NA	NA	NA	0.232	NA	4.6581
1186	6	139208118	139208118	T	G	intronic	ECT2L	NA	NA	NA	intronic	ENSG00000203734	NA	NA	NA	NA	NA	6q24.1	NA	NA	Name=2	NA	rs7764840	0.24	0.24	0.232	0.245807	0.159	0.253	0.1311	0.466	0.1115	0.16	0.26	0.14	0.4	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.587794	NA	NA	0.182904	0.37789	NA	0.239	NA	4.658096
1186	7	93544393	93544393	A	G	intergenic	GNGT1,GNG11	dist=3908;dist=6623	NA	NA	intergenic	ENSG00000127928,ENSG00000127920	dist=3816;dist=6618	NA	NA	Score=573;Name=lod=283	NA	7q21.3	NA	Name=p300,CEBPB,c-Fos,AP-2gamma	NA	NA	rs180258	0.64	0.64	0.623	0.607827	0.6759	0.7401	0.6254	0.4622	0.5859	0.67	0.77	0.63	0.45	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.087706	NA	NA	NA	NA	NA	0.717	NA	4.6574334
1186	4	141600320	141600320	A	G	exonic	TBC1D9	NA	synonymous SNV	TBC1D9:NM_015130:exon5:c.T627C:p.L209L	exonic	ENSG00000109436	NA	synonymous SNV	ENSG00000109436:ENST00000442267:exon5:c.T627C:p.L209L	NA	NA	4q31.21	Score=797;Name=V$BACH1_01	NA	NA	NA	rs4956329	0.65	0.65	0.635	0.634984	0.668	0.5655	0.6124	0.6884	0.6166	0.68	0.59	0.62	0.68	0.6622	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.072451	NA	NA	0.679124	0.695355	NA	0.71	NA	4.6573426
1186	16	20441084	20441084	T	C	exonic	ACSM5	NA	synonymous SNV	ACSM5:NM_017888:exon8:c.T1086C:p.T362T	exonic	ENSG00000183549	NA	synonymous SNV	ENSG00000183549:ENST00000331849:exon8:c.T1086C:p.T362T	NA	NA	16p12.3	NA	NA	NA	NA	rs8063682	0.5	0.5	0.53	0.542532	0.3211	0.755	0.2867	0.7428	0.4622	0.33	0.73	0.3	0.65	0.3702	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.234687	NA	NA	0.318171	0.663867	NA	0.645	NA	4.6571956
1186	7	65579987	65579987	C	G	intronic	CRCP	NA	NA	NA	intronic	ENSG00000241258,ENSG00000249319	NA	NA	NA	NA	NA	7q11.21	NA	Name=HEY1,Pol2(b),HA-E2F1,Pol2-4H8,Oct-2,CHD2_(N-1250),CTCF,POU2F2,E2F4,YY1_(C-20),E2F6,Pol2,Pol2(phosphoS2),TCF4	NA	NA	rs160639	0.12	0.12	0.073	0.139377	0.1054	0.1498	0.2133	0.0688	0.2065	0.09	0.18	0.18	0.05	0.128	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.473413	NA	NA	0.109419	0.057422	NA	0.196	NA	4.657181
1186	10	26312824	26312824	G	A	intronic	MYO3A	NA	NA	NA	intronic	ENSG00000095777	NA	NA	NA	NA	NA	10p12.1	Score=868;Name=V$STAT5B_01	NA	NA	NA	rs1339814	0.29	0.29	0.277	0.301318	0.3429	0.2857	0.2406	0.2186	0.4294	0.35	0.28	0.23	0.23	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.375644	NA	NA	NA	NA	NA	0.225	NA	4.6571
1186	14	57507913	57507913	G	T	intergenic	OTX2-AS1,EXOC5	dist=110363;dist=161281	NA	NA	ncRNA_exonic	ENSG00000258758	NA	NA	NA	Score=446;Name=lod=87	NA	14q22.3	NA	NA	NA	NA	rs1886011	0.31	0.31	0.281	0.327875	0.3429	0.3681	0.4712	0.1104	0.4632	0.34	0.33	0.45	0.12	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.474235	1.474235	NA	NA	NA	NA	0.29	NA	4.6571
1186	3	10885920	10885920	T	C	exonic	SLC6A11	NA	synonymous SNV	SLC6A11:NM_014229:exon5:c.T645C:p.S215S	exonic	ENSG00000132164	NA	synonymous SNV	ENSG00000132164:ENST00000254488:exon5:c.T645C:p.S215S	NA	NA	3p25.3	NA	NA	NA	NA	rs2304725	0.34	0.34	0.329	0.374201	0.325	0.4276	0.2161	0.3011	0.5808	0.35	0.41	0.23	0.3	0.3482	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.828454	NA	NA	0.336395	0.310713	ID=COSM1178477;OCCURENCE=1(prostate)	0.304	NA	4.6570716
1186	19	55142739	55142739	A	C	exonic	LILRB1	NA	synonymous SNV	LILRB1:NM_001081637:exon3:c.A52C:p.R18R,LILRB1:NM_001081638:exon3:c.A52C:p.R18R,LILRB1:NM_001081639:exon3:c.A52C:p.R18R,LILRB1:NM_006669:exon4:c.A52C:p.R18R	exonic	ENSG00000104972	NA	synonymous SNV	ENSG00000104972:ENST00000396315:exon2:c.A52C:p.R18R,ENSG00000104972:ENST00000396317:exon2:c.A52C:p.R18R,ENSG00000104972:ENST00000421584:exon2:c.A52C:p.R18R,ENSG00000104972:ENST00000427581:exon2:c.A160C:p.R54R,ENSG00000104972:ENST00000324602:exon3:c.A52C:p.R18R,ENSG00000104972:ENST00000396327:exon3:c.A52C:p.R18R,ENSG00000104972:ENST00000396332:exon3:c.A52C:p.R18R,ENSG00000104972:ENST00000434867:exon3:c.A52C:p.R18R,ENSG00000104972:ENST00000396331:exon4:c.A52C:p.R18R	NA	NA	19q13.42	NA	NA	NA	NA	rs1985501	0.46	0.46	0.357	0.450679	0.3032	0.5982	0.4841	0.5537	0.2873	0.3	0.59	0.45	0.57	0.3867	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.067353	NA	NA	0.319726	0.513845	NA	0.507	NA	4.6570406
1186	7	158527051	158527051	T	C	intronic	ESYT2	NA	NA	NA	intronic	ENSG00000117868	NA	NA	NA	NA	NA	7q36.3	NA	Name=CTCF	NA	NA	rs3750052	0.35	0.35	0.332	0.366613	0.175	0.6091	0.2622	0.4455	0.2812	0.18	0.58	0.25	0.43	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.748242	NA	NA	0.168762	0.374277	NA	0.246	NA	4.656238
1186	1	3786189	3786189	G	A	exonic	DFFB	NA	synonymous SNV	DFFB:NM_004402:exon5:c.G531A:p.T177T	exonic	ENSG00000169598	NA	synonymous SNV	ENSG00000169598:ENST00000338895:exon5:c.G531A:p.T177T,ENSG00000169598:ENST00000378209:exon5:c.G531A:p.T177T,ENSG00000169598:ENST00000491998:exon5:c.G531A:p.T177T	NA	NA	1p36.32	NA	NA	NA	NA	rs1141070	0.23	0.23	0.222	0.214257	0.3459	0.1349	0.2277	0.1354	0.2577	0.36	0.12	0.25	0.15	0.2939	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.536515	NA	NA	0.370698	0.182251	NA	0.225	NA	4.6561686
1186	12	94976159	94976159	T	C	exonic	TMCC3	NA	synonymous SNV	TMCC3:NM_020698:exon2:c.A234G:p.V78V	exonic	ENSG00000057704	NA	synonymous SNV	ENSG00000057704:ENST00000261226:exon2:c.A234G:p.V78V,ENSG00000057704:ENST00000548918:exon2:c.A141G:p.V47V,ENSG00000057704:ENST00000551457:exon2:c.A141G:p.V47V	NA	NA	12q22	NA	NA	NA	NA	rs3747551	0.33	0.33	0.302	0.326278	0.3231	0.3522	0.4092	0.2421	0.3579	0.3	0.36	0.43	0.27	0.3458	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.862153	NA	NA	0.341628	0.2601	NA	0.312	NA	4.6561386
1186	7	2309355	2309355	G	A	intronic	SNX8	NA	NA	NA	intronic	ENSG00000106266	NA	NA	NA	NA	NA	7p22.3	NA	NA	Name=58	NA	rs6947645	0.33	0.33	0.368	0.332867	0.3439	0.1954	0.2363	0.525	0.272	0.36	0.19	0.24	0.49	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.367197	NA	NA	NA	NA	NA	0.319	NA	4.6561
1186	22	16870890	16870890	C	T	intergenic	OR11H1,CCT8L2	dist=421086;dist=200758	NA	NA	ncRNA_exonic	ENSG00000225293	NA	NA	NA	Score=676;Name=lod=743	NA	22q11.1	NA	NA	NA	NA	rs131536	0.23	0.23	0.151	0.273163	0.3439	0.3661	0.3329	0.0825	0.32	0.26	0.29	0.27	0.09	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.364797	NA	NA	NA	NA	NA	NA	NA	4.6561
1186	19	40172017	40172017	G	A	ncRNA_intronic	LGALS17A	NA	NA	NA	ncRNA_intronic	ENSG00000226025	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs28457128	0.05	0.05	0.038	0.0391374	0.006	0.001	0.0231	0.1309	NA	0.01	NA	0.04	0.16	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.426626	NA	NA	0.004714	0.128613	NA	0.022	NA	4.6559526
1186	1	14105298	14105298	G	A	exonic	PRDM2	NA	synonymous SNV	PRDM2:NM_001007257:exon3:c.G405A:p.E135E,PRDM2:NM_012231:exon8:c.G1008A:p.E336E,PRDM2:NM_015866:exon8:c.G1008A:p.E336E	exonic	ENSG00000116731	NA	synonymous SNV	ENSG00000116731:ENST00000413440:exon3:c.G405A:p.E135E,ENSG00000116731:ENST00000343137:exon4:c.G405A:p.E135E,ENSG00000116731:ENST00000235372:exon8:c.G1008A:p.E336E,ENSG00000116731:ENST00000311066:exon8:c.G1008A:p.E336E	NA	NA	1p36.21	NA	NA	NA	NA	rs1203678	0.34	0.34	0.297	0.316294	0.3101	0.373	0.5389	0.2012	0.2618	0.3	0.41	0.51	0.19	0.356	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.21336	NA	NA	0.344651	0.243532	NA	0.341	NA	4.6559156
1186	16	2138422	2138422	C	G	intronic	TSC2	NA	NA	NA	intronic	ENSG00000103197	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs13332222	0.19	0.19	0.184	0.200879	0.1183	NA	0.1527	0.5756	0.0204	0.12	NA	0.18	0.53	0.121	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.717084	NA	NA	0.104933	0.478389	NA	0.29	CLINSIG=untested;CLNDBN=Tuberous_sclerosis_syndrome;CLNREVSTAT=not;CLNACC=RCV000043243.2;CLNDSDB=GeneReviews:MedGen:OMIM:SNOMED_CT;CLNDSDBID=NBK1220:C0041341:191100:7199000	4.655767
1186	7	76984572	76984572	G	A	exonic	GSAP	NA	synonymous SNV	GSAP:NM_017439:exon16:c.C1296T:p.C432C	exonic	ENSG00000186088	NA	synonymous SNV	ENSG00000186088:ENST00000257626:exon16:c.C1296T:p.C432C	NA	NA	7q11.23	NA	NA	NA	NA	rs2037753	0.49	0.49	0.465	0.531949	0.2962	0.504	0.4798	0.8253	0.4438	0.31	0.46	0.48	0.81	0.3974	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.33014	NA	NA	0.317326	0.738765	NA	0.435	NA	4.6557406
1186	2	110942816	110942816	G	C	intronic	NPHP1	NA	NA	NA	intronic	ENSG00000144061	NA	NA	NA	Score=417;Name=lod=66	NA	2q13	NA	NA	NA	NA	rs1810096	0.51	0.51	0.516	0.52496	0.3449	0.5942	0.415	0.6581	0.5368	0.33	0.58	0.48	0.7	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.687558	NA	NA	NA	NA	NA	0.449	NA	4.6551
1186	6	7506622	7506622	G	A	intergenic	RIOK1,DSP	dist=88352;dist=35248	NA	NA	ncRNA_exonic	ENSG00000219993	NA	NA	NA	Score=699;Name=lod=926	NA	6p24.3	NA	NA	NA	NA	rs2763132	0.28	0.28	0.277	0.282748	0.3449	0.1885	0.3573	0.1982	0.3773	0.36	0.22	0.37	0.18	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.064315	NA	NA	NA	NA	NA	0.232	NA	4.6551
1186	22	16871080	16871080	C	A	intergenic	OR11H1,CCT8L2	dist=421276;dist=200568	NA	NA	ncRNA_intronic	ENSG00000225293	NA	NA	NA	Score=676;Name=lod=743	NA	22q11.1	NA	NA	NA	NA	rs140374	0.27	0.27	0.21	0.273363	0.3449	0.3681	0.3329	0.0809	0.32	0.3	0.34	0.33	0.1	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.74087	NA	NA	NA	NA	NA	NA	NA	4.6551
1187	1	51873951	51873951	G	A	exonic	EPS15	NA	synonymous SNV	EPS15:NM_001159969:exon3:c.C387T:p.Y129Y,EPS15:NM_001981:exon15:c.C1329T:p.Y443Y	exonic	ENSG00000085832	NA	synonymous SNV	ENSG00000085832:ENST00000396122:exon4:c.C360T:p.Y120Y,ENSG00000085832:ENST00000371733:exon15:c.C1329T:p.Y443Y	Score=640;Name=lod=534	NA	1p32.3	NA	NA	NA	NA	rs1065754	0.8	0.8	0.801	0.822684	0.6223	0.9921	0.7622	0.8941	0.8006	0.65	0.99	0.74	0.86	0.7347	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.951701	NA	NA	0.654767	0.874716	NA	0.906	NA	4.6548996
1187	4	88814207	88814207	G	A	intergenic	MEPE,SPP1	dist=46239;dist=82595	NA	NA	ncRNA_exonic	ENSG00000183199	NA	NA	NA	Score=669;Name=lod=698	NA	4q22.1	NA	NA	NA	NA	rs3811820	0.21	0.21	0.199	0.196486	0.1759	0.3105	0.2061	0.1626	0.1391	0.17	0.32	0.19	0.16	0.1695	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.441109	NA	NA	NA	NA	ID=COSN167270;OCCURENCE=2(large_intestine)	0.138	NA	4.6546
1187	2	201502898	201502898	G	A	intronic	AOX1	NA	NA	NA	intronic	ENSG00000138356	NA	NA	NA	NA	NA	2q33.1	NA	NA	Name=5	NA	rs2470900	0.19	0.19	0.188	0.192891	0.1064	0.4405	0.1772	0.0499	0.2311	0.11	0.44	0.15	0.06	0.146	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.766065	NA	NA	0.093372	0.066954	NA	0.246	NA	4.654228
1187	7	36698684	36698684	C	T	intronic	AOAH	NA	NA	NA	intronic	ENSG00000136250	NA	NA	NA	NA	NA	7p14.2	NA	Name=CEBPB	NA	NA	rs6959295	0.34	0.34	0.343	0.356829	0.3459	0.4296	0.2939	0.2655	0.4611	0.36	0.42	0.27	0.27	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.124558	NA	NA	NA	NA	NA	0.319	NA	4.6541
1187	17	3786907	3786907	G	A	intronic	CAMKK1	NA	NA	NA	intronic	ENSG00000004660	NA	NA	NA	NA	Name=Smoking behavior	17p13.2	NA	NA	NA	NA	rs758642	0.3	0.3	0.296	0.298922	0.3459	0.1349	0.3573	0.3623	0.2924	0.34	0.15	0.4	0.33	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.424474	NA	NA	NA	NA	NA	0.5	NA	4.6541
1187	7	29690677	29690677	G	A	ncRNA_exonic	LOC646762	NA	NA	NA	ncRNA_exonic	ENSG00000225264	NA	NA	NA	NA	NA	7p14.3	NA	NA	NA	NA	rs117145942	0.01	0.01	0.002	0.00519169	0.0129	NA	0.0086	0.0023	0.0041	0.01	NA	0.01	0.002	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.577193	NA	NA	NA	NA	NA	0.007	NA	4.6537666
1187	2	203806724	203806724	C	T	intronic	ALS2CR8	NA	NA	NA	intronic	ENSG00000138380	NA	NA	NA	NA	NA	2q33.2	NA	NA	Name=36	NA	rs75869289	0.07	0.07	0.065	0.0471246	0.1302	0.0159	0.0749	0.0174	0.0143	0.14	0.02	0.09	0.02	0.0909	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.8719	NA	NA	0.125183	0.034152	NA	0.036	NA	4.653717
1187	2	210044808	210044808	A	G	intergenic	PTH2R,MAP2	dist=685577;dist=243963	NA	NA	ncRNA_exonic	ENSG00000229670	NA	NA	NA	Score=748;Name=lod=1467	NA	2q34	NA	NA	NA	NA	rs6727838	0.34	0.34	0.339	0.315096	0.3469	0.4087	0.2882	0.2648	0.273	0.36	0.39	0.27	0.28	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.407594	NA	NA	NA	NA	NA	0.283	NA	4.6531
1187	2	210045229	210045229	A	G	intergenic	PTH2R,MAP2	dist=685998;dist=243542	NA	NA	ncRNA_exonic	ENSG00000229670	NA	NA	NA	Score=689;Name=lod=839	NA	2q34	NA	NA	NA	NA	rs4332863	0.34	0.34	0.351	0.316893	0.3469	0.4087	0.2896	0.2648	0.2812	0.36	0.39	0.27	0.28	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.117517	NA	NA	NA	NA	NA	0.283	NA	4.6531
1187	2	210045293	210045293	T	C	intergenic	PTH2R,MAP2	dist=686062;dist=243478	NA	NA	ncRNA_exonic	ENSG00000229670	NA	NA	NA	Score=689;Name=lod=839	NA	2q34	NA	NA	NA	NA	rs6435517	0.34	0.34	0.329	0.316893	0.3469	0.4087	0.2896	0.2648	0.2812	0.36	0.39	0.27	0.28	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.849591	1.849591	NA	NA	NA	NA	0.275	NA	4.6531
1187	2	210045844	210045844	A	G	intergenic	PTH2R,MAP2	dist=686613;dist=242927	NA	NA	ncRNA_exonic	ENSG00000229670	NA	NA	NA	Score=444;Name=lod=85	NA	2q34	NA	NA	NA	NA	rs1837431	0.34	0.34	0.357	0.316893	0.3469	0.4087	0.2896	0.2648	0.2812	0.36	0.39	0.27	0.28	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.160379	NA	NA	NA	NA	NA	0.283	NA	4.6531
1187	3	53891097	53891097	C	G	intronic	IL17RB	NA	NA	NA	intronic	ENSG00000056736	NA	NA	NA	NA	NA	3p21.1	NA	NA	Name=3	NA	rs2276840	0.39	0.39	0.416	0.387979	0.3469	0.4643	0.2997	0.4236	0.3661	0.33	0.51	0.33	0.41	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.814734	NA	NA	NA	NA	NA	0.428	NA	4.6531
1187	4	3024044	3024044	C	T	intronic	GRK4	NA	NA	NA	intronic	ENSG00000125388	NA	NA	NA	NA	NA	4p16.3	NA	NA	Name=3	NA	rs2471325	0.25	0.25	0.229	0.222045	0.3469	0.0962	0.2911	0.2421	0.1472	0.35	0.1	0.31	0.25	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.385802	NA	NA	NA	NA	NA	0.159	NA	4.6531
1187	5	23304211	23304211	G	T	intergenic	CDH12,PRDM9	dist=450480;dist=203513	NA	NA	ncRNA_exonic	ENSG00000250332	NA	NA	NA	Score=589;Name=lod=329	NA	5p14.2	NA	NA	NA	NA	rs12697620	0.42	0.42	0.438	0.507987	0.3469	0.2857	0.3833	0.8306	0.5552	0.33	0.27	0.36	0.78	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.156945	NA	NA	NA	NA	NA	0.478	NA	4.6531
1187	5	23304724	23304724	G	C	intergenic	CDH12,PRDM9	dist=450993;dist=203000	NA	NA	ncRNA_exonic	ENSG00000250332	NA	NA	NA	Score=608;Name=lod=394	NA	5p14.2	NA	NA	NA	NA	rs10072437	0.38	0.38	0.357	0.460264	0.3469	0.2857	0.3718	0.6558	0.5552	0.33	0.27	0.35	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.147689	NA	NA	NA	NA	NA	0.42	NA	4.6531
1187	10	13100441	13100441	A	C	intergenic	CCDC3,OPTN	dist=56737;dist=41641	NA	NA	ncRNA_exonic	ENSG00000225251	NA	NA	NA	Score=779;Name=lod=1950	NA	10p13	NA	NA	NA	NA	rs622491	0.33	0.33	0.318	0.284345	0.3469	0.126	0.3487	0.4092	0.1687	0.36	0.14	0.41	0.42	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.23605	NA	NA	NA	NA	NA	0.333	NA	4.6531
1187	12	27234505	27234505	A	T	intronic	C12orf71	NA	NA	NA	intronic	ENSG00000214700	NA	NA	NA	NA	NA	12p11.23	NA	Name=STAT3,CTCF	NA	NA	rs34457591	0.52	0.52	0.474	0.521166	0.3469	0.8591	0.6009	0.32	0.5675	0.35	0.85	0.59	0.33	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.190612	NA	NA	NA	NA	NA	0.42	NA	4.6531
1187	11	57971195	57971195	G	A	exonic	OR1S2	NA	synonymous SNV	OR1S2:NM_001004459:exon1:c.C459T:p.F153F	exonic	ENSG00000197887	NA	synonymous SNV	ENSG00000197887:ENST00000302592:exon1:c.C459T:p.F153F	NA	NA	11q12.1	NA	NA	NA	NA	rs11229279	0.41	0.41	0.393	0.426717	0.3161	0.752	0.3876	0.2239	0.5072	0.31	0.71	0.38	0.23	0.3712	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.662206	NA	NA	0.32635	0.248978	ID=COSM147238;OCCURENCE=1(stomach)	0.377	NA	4.6530166
1187	16	70016573	70016573	G	A	ncRNA_exonic	PDXDC2P	NA	NA	NA	exonic	ENSG00000226232	NA	nonsynonymous SNV	ENSG00000226232:ENST00000532298:exon3:c.C337T:p.R113C,ENSG00000226232:ENST00000325845:exon22:c.C292T:p.R98C	NA	NA	16q22.1	NA	NA	NA	NA	rs3748384	0.47	0.47	0.5	0.556709	0.3837	0.8869	0.428	0.4546	0.6237	0.35	0.75	0.43	0.39	0.4633	0.75	0.06	T	0.02	B	0.016	B	.	.	.	.	.	.	0.88	T	-1.001	T	0.000	T	0.205	-0.264	2.732	-1.01	-0.254	-0.614	.	-0.264143	NA	0.28	NA	NA	NA	NA	NA	4.653
1187	12	129429075	129429075	C	T	intronic	GLT1D1	NA	NA	NA	ncRNA_exonic	ENSG00000255838	NA	NA	NA	Score=551;Name=lod=231	NA	12q24.33	NA	NA	NA	NA	rs470404	0.64	0.64	0.597	0.654752	0.6809	0.7659	0.7824	0.3676	0.8108	0.66	0.77	0.77	0.36	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.852133	NA	NA	NA	NA	NA	0.71	NA	4.6524333
1187	2	17466012	17466012	T	C	intergenic	FAM49A,RAD51AP2	dist=618878;dist=225974	NA	NA	ncRNA_exonic	ENSG00000214843	NA	NA	NA	Score=682;Name=lod=786	NA	2p24.2	NA	NA	NA	NA	rs1976809	0.33	0.33	0.336	0.374002	0.3479	0.0565	0.2262	0.6384	0.4755	0.34	0.06	0.24	0.69	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.504417	NA	NA	NA	NA	NA	0.384	NA	4.6521
1187	3	148703787	148703787	T	G	intergenic	CPA3,GYG1	dist=88915;dist=5408	NA	NA	ncRNA_exonic	ENSG00000241627	NA	NA	NA	Score=646;Name=lod=565	NA	3q24	NA	NA	NA	NA	rs3732559	0.43	0.43	0.453	0.416933	0.3479	0.3641	0.3429	0.677	0.2434	0.33	0.36	0.36	0.72	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.703335	NA	NA	NA	NA	NA	0.304	NA	4.6521
1187	6	7517131	7517131	A	T	intergenic	RIOK1,DSP	dist=98861;dist=24739	NA	NA	ncRNA_exonic	ENSG00000234115	NA	NA	NA	Score=578;Name=lod=297	NA	6p24.3	NA	NA	NA	NA	rs2798162	0.28	0.28	0.266	0.273962	0.3479	0.1855	0.3588	0.1641	0.3773	0.36	0.22	0.37	0.16	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.258798	NA	NA	NA	NA	NA	0.246	NA	4.6521
1187	7	57128425	57128425	G	A	intergenic	MIR4283-1,ZNF479	dist=104854;dist=58901	NA	NA	ncRNA_exonic	ENSG00000229508	NA	NA	NA	Score=658;Name=lod=630	NA	7p11.2	NA	NA	NA	NA	rs9719133	0.32	0.32	0.25	0.339058	0.3479	0.3978	0.3919	0.2496	0.3528	0.31	0.35	0.38	0.25	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.04074	NA	NA	NA	NA	NA	NA	NA	4.6521
1187	16	32857329	32857329	A	C	intergenic	TP53TG3,SLC6A10P	dist=169881;dist=31468	NA	NA	ncRNA_exonic	ENSG00000259934	NA	NA	NA	Score=651;Name=lod=590	NA	16p11.2	NA	NA	NA	NA	rs689734	0.3	0.3	0.293	0.39377	0.3479	0.3502	0.2738	0.4879	0.4438	0.25	0.28	0.26	0.45	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.036081	NA	NA	NA	NA	NA	0.094	NA	4.6521
1187	16	78082517	78082517	C	T	intergenic	CLEC3A,WWOX	dist=16516;dist=50810	NA	NA	ncRNA_exonic	ENSG00000260731	NA	NA	NA	Score=505;Name=lod=151	NA	16q23.1	NA	NA	NA	NA	rs12919316	0.24	0.24	0.215	0.208067	0.3479	0.1984	0.2161	0.0628	0.2648	0.37	0.2	0.25	0.08	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.006381	NA	NA	NA	NA	NA	0.145	NA	4.6521
1187	19	38282540	38282540	G	C	intergenic	ZNF573,LOC644554	dist=12310;dist=25511	NA	NA	ncRNA_exonic	ENSG00000267422	NA	NA	NA	Score=766;Name=lod=1722	NA	19q13.12	NA	NA	NA	NA	rs112894371	0.2	0.2	0.168	0.189696	0.3479	0.0298	0.2579	0.0923	0.2751	0.35	0.04	0.26	0.09	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.023105	2.023105	NA	NA	NA	NA	0.283	NA	4.6521
1187	22	42059768	42059768	G	T	exonic	XRCC6	NA	synonymous SNV	XRCC6:NM_001469:exon13:c.G1779T:p.G593G	exonic	ENSG00000196419	NA	synonymous SNV	ENSG00000196419:ENST00000405506:exon11:c.G1629T:p.G543G,ENSG00000196419:ENST00000359308:exon12:c.G1779T:p.G593G,ENSG00000196419:ENST00000428575:exon12:c.G1380T:p.G460G,ENSG00000196419:ENST00000360079:exon13:c.G1779T:p.G593G,ENSG00000196419:ENST00000402580:exon13:c.G1656T:p.G552G,ENSG00000196419:ENST00000405878:exon13:c.G1779T:p.G593G	NA	NA	22q13.2	NA	NA	NA	NA	rs132788	0.24	0.24	0.197	0.209065	0.3628	0.2331	0.2089	0.034	0.2628	0.38	0.25	0.23	0.04	0.2935	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.574142	NA	NA	0.358372	0.09192	NA	0.196	NA	4.6519946
1187	4	119736796	119736796	A	C	exonic	SEC24D	NA	synonymous SNV	SEC24D:NM_014822:exon5:c.T483G:p.P161P	exonic	ENSG00000150961	NA	nonsynonymous SNV	ENSG00000150961:ENST00000509818:exon4:c.T334G:p.F112V,ENSG00000150961:ENST00000506622:exon6:c.T590G:p.L197R	NA	NA	4q26	NA	NA	NA	NA	rs2389688	0.43	0.43	0.388	0.436901	0.4354	0.5506	0.5807	0.2436	0.4806	0.43	0.53	0.55	0.23	0.4624	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.052721	NA	0	0.450581	0.291194	ID=COSM1131292;OCCURENCE=1(prostate)	0.435	NA	4.651619
1187	17	71239087	71239087	G	T	exonic	C17orf80	NA	synonymous SNV	C17orf80:NM_001100621:exon4:c.G1566T:p.T522T,C17orf80:NM_001100622:exon5:c.G1674T:p.T558T,C17orf80:NM_017941:exon5:c.G1674T:p.T558T	exonic	ENSG00000141219	NA	synonymous SNV	ENSG00000141219:ENST00000582793:exon3:c.G81T:p.T27T,ENSG00000141219:ENST00000255557:exon4:c.G1566T:p.T522T,ENSG00000141219:ENST00000268942:exon4:c.G1566T:p.T522T,ENSG00000141219:ENST00000535032:exon4:c.G1674T:p.T558T,ENSG00000141219:ENST00000577615:exon4:c.G1566T:p.T522T,ENSG00000141219:ENST00000359042:exon5:c.G1674T:p.T558T,ENSG00000141219:ENST00000426147:exon5:c.G1674T:p.T558T	NA	NA	17q25.1	NA	NA	NA	NA	rs1566290	0.23	0.23	0.208	0.220248	0.331	0.1558	0.3761	0.0408	0.3047	0.35	0.15	0.36	0.05	0.3192	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.212426	NA	NA	0.364884	0.09419	ID=COSM148332;OCCURENCE=1(stomach)	0.225	NA	4.6515826
1187	4	144682752	144682752	A	G	intergenic	FREM3,GYPE	dist=60924;dist=109267	NA	NA	ncRNA_exonic	ENSG00000250345	NA	NA	NA	Score=584;Name=lod=316	NA	4q31.21	NA	NA	NA	NA	rs10857411	0.3	0.3	0.249	0.30651	0.3489	0.2222	0.4092	0.2738	0.3211	0.33	0.22	0.42	0.26	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.084984	NA	NA	NA	NA	NA	0.304	NA	4.6511
1187	5	145427527	145427527	T	A	intronic	SH3RF2	NA	NA	NA	intronic	ENSG00000156463	NA	NA	NA	NA	NA	5q32	NA	NA	Name=2	NA	rs1859895	0.3	0.3	0.281	0.292332	0.3489	0.2798	0.3847	0.261	0.2239	0.33	0.29	0.36	0.23	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.201529	NA	NA	NA	NA	NA	0.37	NA	4.6511
1187	15	25230147	25230147	A	G	ncRNA_exonic	PAR5	NA	NA	NA	ncRNA_exonic	ENSG00000270704	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs112097055	0.02	0.02	0.016	0.0235623	0.0159	NA	0.0101	0.0461	0.0348	0.02	NA	0.01	0.03	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.142298	NA	NA	NA	NA	NA	NA	NA	4.6507666
1187	19	41444875	41444875	A	G	ncRNA_exonic	CYP2B7P1	NA	NA	NA	ncRNA_exonic	ENSG00000256612	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs8112176	0.04	0.04	0.028	0.0397364	NA	NA	0.0231	0.1384	NA	NA	0.0017	0.03	0.13	0.0165	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.411909	1.411909	NA	NA	NA	NA	0.036	NA	4.6501666
1187	7	138089192	138089192	T	G	intergenic	MIR4468,TRIM24	dist=280625;dist=55887	NA	NA	ncRNA_exonic	ENSG00000213237	NA	NA	NA	Score=343;Name=lod=33	NA	7q33	NA	NA	NA	NA	rs10245726	0.33	0.33	0.339	0.35004	0.3499	0.0843	0.2565	0.6278	0.3149	0.35	0.08	0.3	0.63	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.30817	NA	NA	NA	NA	NA	0.37	NA	4.6501
1187	6	29718869	29718869	C	T	ncRNA_exonic	IFITM4P	NA	NA	NA	ncRNA_exonic	ENSG00000235821	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs56304249	0.01	0.01	NA	0.00678914	0.0169	NA	0.0144	0.0015	0.0051	0.01	NA	0.02	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.988818	NA	NA	NA	NA	NA	0.065	NA	4.6497666
1187	7	94038966	94038966	G	A	intronic	COL1A2	NA	NA	NA	intronic	ENSG00000164692	NA	NA	NA	NA	NA	7q21.3	NA	Name=Pol2	NA	NA	rs28754326	0.13	0.13	0.145	0.129792	0.1312	0.0446	0.1182	0.27	0.0348	0.12	0.06	0.13	0.24	0.1056	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.827512	NA	NA	0.113605	0.249887	NA	0.123	NA	4.649595
1187	2	153378459	153378459	T	C	exonic	FMNL2	NA	synonymous SNV	FMNL2:NM_052905:exon2:c.T120C:p.N40N	exonic	ENSG00000157827	NA	synonymous SNV	ENSG00000157827:ENST00000288670:exon2:c.T120C:p.N40N	Score=649;Name=lod=577	NA	2q23.3	NA	NA	NA	NA	rs4664114	0.7	0.7	0.685	0.690695	0.673	0.751	0.7723	0.6377	0.6605	0.67	0.74	0.72	0.68	0.684	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.248318	2.248318	NA	0.660162	0.641221	NA	0.594	NA	4.6495046
1187	15	55710365	55710365	T	C	ncRNA_intronic	DYX1C1-CCPG1	NA	NA	NA	ncRNA_intronic	ENSG00000261771	NA	NA	NA	NA	NA	15q21.3	NA	NA	Name=2	NA	rs56070549	0.19	0.19	0.147	0.159545	0.3787	0.0575	0.2032	0.0348	0.1769	0.37	0.06	0.21	0.04	0.2938	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.243793	NA	NA	0.344711	0.084131	NA	0.174	NA	4.6494556
1187	14	68888659	68888659	T	C	intronic	RAD51B	NA	NA	NA	ncRNA_exonic	ENSG00000258477	NA	NA	NA	Score=662;Name=lod=655	NA	14q24.1	NA	NA	NA	NA	rs10747299	0.85	0.85	0.84	0.841853	0.6839	0.9673	0.8458	0.9395	0.7403	0.69	0.98	0.83	0.95	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.829825	NA	NA	NA	NA	NA	0.833	NA	4.6494333
1187	11	2428341	2428341	G	A	intronic	TRPM5	NA	NA	NA	ncRNA_intronic	ENSG00000230483	NA	NA	NA	NA	NA	11p15.5	NA	Name=ZNF263	NA	NA	rs11022676	0.15	0.15	NA	0.233826	0.2624	0.3125	0.2363	0.1104	0.2883	0.19	0.16	0.14	0.09	0.239	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.29656	NA	NA	0.18253	0.095978	ID=COSM1604441;OCCURENCE=1(liver)	0.138	NA	4.6494033
1187	10	101825160	101825160	C	G	intronic	CPN1	NA	NA	NA	intronic	ENSG00000120054	NA	NA	NA	NA	NA	10q24.2	NA	Name=Rad21	Name=3	NA	rs3829161	0.39	0.39	0.394	0.381789	0.4761	0.1885	0.4265	0.4743	0.3272	0.46	0.2	0.46	0.47	0.4169	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.692029	NA	NA	0.457791	0.478892	NA	0.478	NA	4.649209
1187	2	20491584	20491584	T	C	intronic	PUM2	NA	NA	NA	intronic	ENSG00000055917	NA	NA	NA	Score=547;Name=lod=223	NA	2p24.1	NA	NA	NA	NA	rs3821218	0.26	0.26	0.237	0.238019	0.3509	0.2054	0.2896	0.0908	0.318	0.36	0.22	0.33	0.1	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.678085	NA	NA	NA	NA	NA	0.217	NA	4.6491
1187	2	219259270	219259270	G	A	intronic	SLC11A1	NA	NA	NA	intronic	ENSG00000018280	NA	NA	NA	NA	NA	2q35	NA	NA	Name=8	NA	rs2279015	0.45	0.45	0.491	0.475839	0.3509	0.2688	0.4049	0.8797	0.3221	0.34	0.27	0.38	0.88	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.081888	NA	NA	NA	NA	NA	0.609	NA	4.6491
1187	19	23779399	23779399	G	A	intergenic	ZNF91,ZNF675	dist=201130;dist=56309	NA	NA	ncRNA_exonic	ENSG00000268455	NA	NA	NA	Score=321;Name=lod=27	NA	19p12	NA	NA	NA	NA	rs4932713	0.51	0.51	0.487	0.540735	0.3509	0.7728	0.5432	0.4841	0.5716	0.35	0.74	0.51	0.5	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.884084	NA	NA	NA	NA	NA	0.543	NA	4.6491
1187	12	18889149	18889149	T	C	intronic	PLCZ1	NA	NA	NA	ncRNA_intronic	ENSG00000255648	NA	NA	NA	Score=419;Name=lod=67	NA	12p12.3	NA	NA	NA	NA	rs12300257	0.27	0.27	0.259	0.276957	0.2227	0.3452	0.2882	0.2572	0.2812	0.23	0.34	0.27	0.22	0.2398	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.009396	NA	NA	0.221964	0.232637	NA	0.203	NA	4.6488693
1187	3	190342442	190342442	G	A	intronic	IL1RAP	NA	NA	NA	ncRNA_exonic	ENSG00000231047	NA	NA	NA	Score=300;Name=lod=22	NA	3q28	NA	NA	NA	NA	rs2193877	0.67	0.67	0.66	0.656949	0.6849	0.8264	0.6354	0.4924	0.6912	0.69	0.8	0.66	0.52	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.328896	NA	NA	NA	NA	NA	0.652	NA	4.6484333
1187	5	37506332	37506332	T	C	intronic	WDR70	NA	NA	NA	ncRNA_exonic	ENSG00000248216	NA	NA	NA	Score=778;Name=lod=1935	NA	5p13.2	NA	NA	NA	NA	rs11957546	0.57	0.57	0.548	0.5623	0.6849	0.5109	0.6945	0.3253	0.7157	0.7	0.56	0.64	0.32	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.652191	NA	NA	NA	NA	NA	0.522	NA	4.6484333
1187	9	136083638	136083638	C	G	intronic	OBP2B	NA	NA	NA	exonic	ENSG00000171102	NA	synonymous SNV	ENSG00000171102:ENST00000372032:exon2:c.G78C:p.G26G	NA	NA	9q34.2	NA	NA	NA	NA	rs72769499	0.11	0.11	0.07	NA	NA	NA	NA	NA	NA	0.17	0.07	0.1	0.05	0.185	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.301895	NA	NA	NA	NA	ID=COSM150737;OCCURENCE=1(stomach)	0.007	NA	4.6483333
1187	1	15789733	15789733	A	G	intronic	CELA2A	NA	NA	NA	intronic	ENSG00000142615	NA	NA	NA	NA	NA	1p36.21	NA	Name=AP-2alpha	NA	NA	rs3815792	0.34	0.34	0.32	0.333666	0.3519	0.2431	0.3156	0.3971	0.3354	0.34	0.24	0.36	0.42	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.01599	NA	NA	NA	NA	NA	0.312	NA	4.6481
1187	1	199357586	199357586	G	C	intergenic	LOC100131234,NR5A2	dist=451028;dist=639144	NA	NA	ncRNA_exonic	ENSG00000236468	NA	NA	NA	Score=854;Name=lod=3942	NA	1q32.1	NA	NA	NA	NA	rs693911	0.33	0.33	0.327	0.348842	0.3519	0.2986	0.3876	0.3525	0.365	0.33	0.29	0.4	0.31	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.084122	NA	NA	NA	NA	NA	0.391	NA	4.6481
1187	3	111637816	111637816	A	G	intronic	PHLDB2	NA	NA	NA	intronic	ENSG00000144824	NA	NA	NA	NA	NA	3q13.2	NA	Name=TCF4	NA	NA	rs16858868	0.38	0.38	0.34	0.338458	0.3519	0.6706	0.3905	0.0545	0.3292	0.37	0.68	0.35	0.05	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.544186	NA	NA	NA	NA	NA	0.326	NA	4.6481
1187	5	77080760	77080760	G	A	intergenic	TBCA,AP3B1	dist=8575;dist=217390	NA	NA	ncRNA_exonic	ENSG00000213763	NA	NA	NA	Score=867;Name=lod=4445	NA	5q14.1	NA	NA	NA	NA	rs254407	0.18	0.18	0.14	0.157548	0.3519	0.0427	0.2363	0.0393	0.18	0.35	0.04	0.22	0.04	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.029021	NA	NA	NA	NA	NA	0.145	NA	4.6481
1187	5	77081219	77081219	C	A	intergenic	TBCA,AP3B1	dist=9034;dist=216931	NA	NA	ncRNA_exonic	ENSG00000213763	NA	NA	NA	Score=867;Name=lod=4445	NA	5q14.1	NA	NA	NA	NA	rs254404	0.17	0.17	0.149	0.157149	0.3519	0.0437	0.2378	0.0363	0.18	0.35	0.04	0.22	0.04	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.353666	NA	NA	NA	NA	NA	0.138	NA	4.6481
1187	6	123892337	123892337	G	A	intronic	TRDN	NA	NA	NA	intronic	ENSG00000186439	NA	NA	NA	NA	NA	6q22.31	NA	Name=KAP1	NA	NA	rs2295732	0.26	0.26	0.276	0.24361	0.3519	0.0536	0.2522	0.3676	0.1544	0.34	0.05	0.27	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.436957	NA	NA	NA	NA	NA	0.355	NA	4.6481
1187	11	65495211	65495211	G	A	intergenic	RNASEH2C,AP5B1	dist=6802;dist=46158	NA	NA	ncRNA_exonic	ENSG00000214659	NA	NA	NA	Score=650;Name=lod=583	NA	11q13.1	NA	NA	NA	NA	rs11227279	0.23	0.23	0.217	0.23742	0.3519	0.2321	0.1974	0.0946	0.3466	0.35	0.2	0.22	0.1	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.780863	NA	NA	NA	NA	NA	0.203	NA	4.6481
1187	19	53727282	53727282	A	G	intergenic	ZNF818P,ZNF677	dist=7927;dist=11356	NA	NA	ncRNA_exonic	ENSG00000267809	NA	NA	NA	Score=544;Name=lod=216	NA	19q13.42	NA	NA	NA	NA	rs11084227	0.42	0.42	0.404	0.425719	0.3519	0.7431	0.3804	0.1679	0.5552	0.34	0.73	0.38	0.21	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.38102	4.38102	0.16	NA	NA	ID=COSN165924;OCCURENCE=1(breast)	0.362	NA	4.6481
1187	11	60695301	60695301	C	A	exonic	TMEM132A	NA	synonymous SNV	TMEM132A:NM_017870:exon3:c.C504A:p.A168A,TMEM132A:NM_178031:exon3:c.C504A:p.A168A	exonic	ENSG00000006118	NA	synonymous SNV	ENSG00000006118:ENST00000005286:exon3:c.C504A:p.A168A,ENSG00000006118:ENST00000453848:exon3:c.C504A:p.A168A	NA	NA	11q12.2	Score=765;Name=V$AHR_01	NA	NA	NA	rs575123	0.72	0.72	0.71	0.739217	0.6451	0.9514	0.7608	0.5272	0.8885	0.65	0.96	0.72	0.52	0.7113	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.31494	NA	NA	0.662313	0.550705	ID=COSM429373,COSM1475612;OCCURENCE=1(breast)	0.652	NA	4.6479536
1187	19	22688243	22688243	C	T	intergenic	ZNF98,LOC440518	dist=83095;dist=90816	NA	NA	intronic	ENSG00000197360	NA	NA	NA	Score=586;Name=lod=321	NA	19p12	NA	NA	NA	NA	rs151291537	0.01	0.01	0.007	0.00698882	0.0189	NA	0.0101	NA	0.0092	0.02	NA	0.01	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.682759	NA	NA	NA	NA	NA	0.007	NA	4.6477667
1187	20	61452837	61452837	G	A	intronic	COL9A3	NA	NA	NA	intronic	ENSG00000092758	NA	NA	NA	Score=251;Name=lod=14	NA	20q13.33	NA	NA	NA	NA	rs117347229	0.08	0.08	0.085	0.0732827	0.1531	0.006	0.0749	0.0378	0.1074	0.15	0.0035	0.09	0.04	0.0924	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.379665	1.379665	NA	0.107093	0.04857	NA	0.08	NA	4.647407
1187	1	202092360	202092360	G	A	exonic	GPR37L1	NA	nonsynonymous SNV	GPR37L1:NM_004767:exon1:c.G269A:p.G90D	exonic	ENSG00000170075	NA	nonsynonymous SNV	ENSG00000170075:ENST00000367282:exon1:c.G269A:p.G90D	NA	NA	1q32.1	NA	NA	NA	NA	rs3795595	0.84	0.84	0.826	0.850439	0.9066	0.8353	0.83	0.7769	0.9223	0.91	0.81	0.87	0.75	0.8861	0.91	0.82	T	0.0	B	0.0	B	0.059	N	1.000	P	-0.41	N	-1.25	T	-0.986	T	0.000	T	0.018	-1.295	0.038	-0.436	-0.033	-0.401	5.969	-1.295134	NA	0.87	0.893488	0.811847	NA	0.826	NA	4.6471454
1187	5	77081484	77081484	C	A	intergenic	TBCA,AP3B1	dist=9299;dist=216666	NA	NA	ncRNA_exonic	ENSG00000213763	NA	NA	NA	Score=867;Name=lod=4445	NA	5q14.1	NA	NA	NA	NA	rs254402	0.17	0.17	0.156	0.156949	0.3529	0.0437	0.2363	0.0356	0.18	0.35	0.04	0.22	0.04	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.591751	NA	NA	NA	NA	NA	0.138	NA	4.6471
1187	5	77081679	77081679	C	T	intergenic	TBCA,AP3B1	dist=9494;dist=216471	NA	NA	ncRNA_exonic	ENSG00000213763	NA	NA	NA	Score=867;Name=lod=4445	NA	5q14.1	NA	NA	NA	NA	rs254400	0.17	0.17	0.148	0.156949	0.3529	0.0437	0.2363	0.0356	0.18	0.35	0.04	0.22	0.04	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.25441	NA	NA	NA	NA	NA	0.123	NA	4.6471
1187	9	32431931	32431931	A	G	intronic	ACO1	NA	NA	NA	intronic	ENSG00000122729	NA	NA	NA	NA	NA	9p21.1	NA	NA	Name=107	NA	rs10970975	0.38	0.38	0.373	0.355631	0.3539	0.5079	0.3487	0.3185	0.2556	0.36	0.47	0.38	0.32	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.725783	NA	NA	NA	NA	NA	0.362	NA	4.6461
1187	11	59259831	59259831	T	C	intergenic	OR4D10,OR4D11	dist=13993;dist=11218	NA	NA	ncRNA_exonic	ENSG00000204989	NA	NA	NA	Score=440;Name=lod=82	NA	11q12.1	NA	NA	NA	NA	rs10896980	0.37	0.37	0.376	0.399161	0.3539	0.3165	0.2608	0.5545	0.4192	0.35	0.28	0.29	0.57	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.318105	NA	NA	NA	NA	ID=COSN163963;OCCURENCE=1(breast)	0.486	NA	4.6461
1187	15	78271251	78271251	T	C	intergenic	LOC645752,LOC91450	dist=52063;dist=14324	NA	NA	ncRNA_exonic	ENSG00000261143	NA	NA	NA	Score=336;Name=lod=31	NA	15q24.3	NA	NA	NA	NA	rs11637205	0.22	0.22	0.019	0.2502	0.3539	0.1369	0.2478	0.2912	0.2065	0.28	0.15	0.24	0.19	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.412789	NA	NA	NA	NA	NA	NA	NA	4.6461
1187	16	74877062	74877062	T	C	intergenic	FA2H,WDR59	dist=68333;dist=30409	NA	NA	ncRNA_exonic	ENSG00000261458	NA	NA	NA	Score=517;Name=lod=168	NA	16q23.1	NA	NA	NA	NA	rs12444292	0.18	0.18	0.175	0.222843	0.3539	0.0079	0.2205	0.2882	0.2229	0.26	0.0035	0.22	0.24	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.612623	NA	NA	NA	NA	NA	NA	NA	4.6461
1187	16	74877063	74877063	G	A	intergenic	FA2H,WDR59	dist=68334;dist=30408	NA	NA	ncRNA_exonic	ENSG00000261458	NA	NA	NA	Score=517;Name=lod=168	NA	16q23.1	NA	NA	NA	NA	rs12446306	0.19	0.19	0.171	0.222843	0.3539	0.0079	0.2205	0.2882	0.2229	0.27	0.0035	0.22	0.25	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.733184	NA	NA	NA	NA	NA	NA	NA	4.6461
1187	16	87873247	87873247	A	C	intronic	SLC7A5	NA	NA	NA	intronic	ENSG00000103257	NA	NA	NA	NA	NA	16q24.2	NA	Name=Pol2	NA	NA	rs750950	0.49	0.49	0.425	0.474441	0.3539	0.7966	0.5245	0.3548	0.3926	0.36	0.81	0.43	0.34	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.599565	NA	NA	NA	NA	NA	0.348	NA	4.6461
1187	19	11327626	11327626	A	G	exonic	DOCK6	NA	synonymous SNV	DOCK6:NM_020812:exon30:c.T3858C:p.D1286D	exonic	ENSG00000130158	NA	synonymous SNV	ENSG00000130158:ENST00000319867:exon16:c.T1875C:p.D625D,ENSG00000130158:ENST00000294618:exon30:c.T3858C:p.D1286D	Score=569;Name=lod=274	NA	19p13.2	NA	NA	NA	NA	rs4804152	0.61	0.61	0.593	0.579473	0.6779	0.5784	0.5634	0.5401	0.544	0.66	0.56	0.59	0.58	0.6436	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.078542	NA	NA	0.699408	0.590909	NA	0.732	NA	4.6457586
1187	1	6694207	6694207	A	G	UTR3	THAP3	NM_138350:c.*59A>G	NA	NA	UTR3	ENSG00000041988	ENST00000377627:c.*59A>G	NA	NA	NA	NA	1p36.31	NA	NA	Name=3	NA	rs12727844	0.34	0.34	0.323	0.36861	0.331	0.3879	0.3429	0.3064	0.4898	0.33	0.39	0.32	0.29	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.032664	NA	NA	0.356694	0.317919	NA	0.384	NA	4.6456394
1187	1	240308147	240308147	T	C	intronic	FMN2	NA	NA	NA	ncRNA_exonic	ENSG00000228818	NA	NA	NA	Score=897;Name=lod=5865	NA	1q43	NA	NA	NA	NA	rs10926139	0.65	0.65	0.64	0.706869	0.6879	0.5188	0.5908	0.9213	0.7127	0.69	0.46	0.58	0.89	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.320655	NA	NA	NA	NA	NA	0.703	NA	4.6454333
1187	1	222713750	222713750	G	A	intronic	HHIPL2	NA	NA	NA	intronic	ENSG00000143512	NA	NA	NA	NA	NA	1q41	NA	NA	Name=19	NA	rs3828079	0.56	0.56	0.564	0.54992	0.3549	0.6538	0.5965	0.7451	0.3466	0.36	0.66	0.52	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.211987	NA	NA	NA	NA	NA	0.536	NA	4.6451
1188	1	155904177	155904177	T	C	UTR5	KIAA0907	NM_014949:c.-13A>G	NA	NA	UTR5	ENSG00000132680	ENST00000368321:c.-13A>G,ENST00000368320:c.-13A>G	NA	NA	Score=600;Name=lod=367	NA	1q22	NA	Name=ELK4,POU2F2,E2F4,HMGN3,GABP,E2F6_(H-50),Pol2(b),GATA-1,TAF1,SP2_(SC-643),TAF7_(SQ-8),Sin3Ak-20,BRCA1_(C-1863),YY1_(C-20),HA-E2F1,TR4,Pol2-4H8,E2F6,ZNF263,KAP1,NRSF,SP1,PU.1,RFX5_(N-494),Pol2,Pol2(phosphoS2),Ini1,PAX5-N19,PAX5-C20,NF-YB,Oct-2,c-Myc,CCNT2,NFKB,HEY1,ELF1_(SC-631),IRF3,TBP,CHD2_(N-1250),GTF2F1_(RAP-74),CTCF,TCF12,USF-1,GTF2B	Name=148	NA	rs2275079	0.8	0.8	0.774	0.779553	0.8926	0.9395	0.9063	0.4334	0.8763	0.9	0.93	0.91	0.44	0.8771	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.135826	2.135826	NA	0.918897	0.548819	NA	0.696	NA	4.6447364
1188	10	124325409	124325409	T	G	intronic	DMBT1	NA	NA	NA	intronic	ENSG00000187908	NA	NA	NA	NA	NA	10q26.13	NA	Name=CTCF_(SC-5916),CTCF_(C-20),Znf143_(16618-1-AP),SMC3_(ab9263),Rad21,CTCF	Name=143	NA	rs3019515	0.68	0.68	0.661	0.689896	0.6789	0.7778	0.7752	0.5582	0.728	0.69	0.77	0.76	0.52	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.470761	NA	NA	0.676933	0.577312	NA	0.725	NA	4.644167
1188	2	38513295	38513295	A	G	intergenic	CYP1B1-AS1,ATL2	dist=104302;dist=8734	NA	NA	ncRNA_exonic	ENSG00000213594	NA	NA	NA	Score=730;Name=lod=1240	NA	2p22.2	NA	NA	NA	NA	rs2373372	0.24	0.24	0.218	0.25	0.3559	0.0635	0.304	0.205	0.3558	0.35	0.07	0.31	0.2	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.075291	NA	NA	NA	NA	NA	0.283	NA	4.6441
1188	2	38513342	38513342	C	G	intergenic	CYP1B1-AS1,ATL2	dist=104349;dist=8687	NA	NA	ncRNA_exonic	ENSG00000213594	NA	NA	NA	Score=730;Name=lod=1240	NA	2p22.2	NA	NA	NA	NA	rs2373373	0.23	0.23	0.199	0.248602	0.3559	0.0655	0.304	0.1929	0.363	0.35	0.07	0.31	0.17	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.414515	NA	NA	NA	NA	NA	0.275	NA	4.6441
1188	3	75406584	75406584	C	T	intergenic	MIR4444-1,FAM86DP	dist=142885;dist=64119	NA	NA	ncRNA_exonic	ENSG00000179799	NA	NA	NA	Score=259;Name=lod=15	NA	3p12.3	NA	NA	NA	NA	rs34054461	0.39	0.39	0.363	0.407748	0.3559	0.374	0.3732	0.5651	0.3078	0.35	0.34	0.36	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.084553	NA	NA	NA	NA	NA	0.362	NA	4.6441
1188	3	194814686	194814686	G	C	intronic	XXYLT1	NA	NA	NA	intronic	ENSG00000173950	NA	NA	NA	NA	NA	3q29	NA	Name=ZNF263	NA	NA	rs4677803	0.61	0.61	0.643	0.626997	0.3559	0.9643	0.4049	0.7262	0.5818	0.37	0.97	0.38	0.72	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.193376	NA	NA	NA	NA	NA	0.391	NA	4.6441
1188	6	150164378	150164378	G	A	intronic	LRP11	NA	NA	NA	intronic	ENSG00000120256	NA	NA	NA	NA	NA	6q25.1	NA	NA	Name=17	NA	rs2184370	0.53	0.53	0.51	0.523762	0.3559	0.8125	0.6383	0.4766	0.3814	0.35	0.79	0.59	0.48	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.693414	NA	NA	NA	NA	NA	0.543	NA	4.6441
1188	16	27145222	27145222	C	A	intergenic	C16orf82,KDM8	dist=64735;dist=69585	NA	NA	ncRNA_exonic	ENSG00000261557	NA	NA	NA	Score=745;Name=lod=1419	NA	16p12.1	NA	NA	NA	NA	rs11646628	0.32	0.32	0.309	0.28115	0.3559	0.4127	0.3357	0.1218	0.2454	0.36	0.43	0.32	0.13	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.587845	NA	NA	NA	NA	NA	0.232	NA	4.6441
1188	2	47693788	47693788	A	T	intronic	MSH2	NA	NA	NA	intronic	ENSG00000095002	NA	NA	NA	NA	NA	2p21	NA	NA	NA	NA	rs12998837	0.07	0.07	0.051	0.0405351	0.1451	NA	0.0591	0.0038	0.0112	0.15	NA	0.07	0.01	0.0885	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.355645	1.355645	NA	0.122442	0.027463	NA	0.051	CLINSIG=non-pathogenic|non-pathogenic|non-pathogenic;CLNDBN=Lynch_syndrome|not_specified|Neoplastic_Syndromes\x2c_Hereditary;CLNREVSTAT=exp|mult|single;CLNACC=RCV000030240.2|RCV000035357.2|RCV000132430.1;CLNDSDB=GeneReviews:MedGen:SNOMED_CT|.|MedGen;CLNDSDBID=NBK1211:C0009405:315058005|.|C0027672	4.643958
1188	9	94768542	94768542	A	G	intergenic	ROR2,SPTLC1	dist=56098;dist=24885	NA	NA	ncRNA_exonic	ENSG00000227399	NA	NA	NA	Score=736;Name=lod=1303	NA	9q22.31	NA	NA	NA	NA	rs10733743	0.53	0.53	0.544	0.581669	0.3569	0.4534	0.6052	0.9236	0.4663	0.35	0.43	0.54	0.92	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.106788	NA	NA	NA	NA	NA	0.688	NA	4.6431
1188	9	95682301	95682301	C	T	intergenic	ZNF484,FGD3	dist=41981;dist=27300	NA	NA	ncRNA_exonic	ENSG00000188101	NA	NA	NA	Score=395;Name=lod=54	NA	9q22.31	NA	NA	NA	NA	rs4510923	0.37	0.37	0.341	0.364417	0.3569	0.121	0.4841	0.5893	0.2342	0.34	0.12	0.5	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.676537	NA	NA	NA	NA	NA	0.406	NA	4.6431
1188	14	51223106	51223106	G	T	intronic	NIN	NA	NA	NA	intronic	ENSG00000100503	NA	NA	NA	NA	NA	14q22.1	NA	Name=USF-1	NA	NA	rs2295846	0.42	0.42	0.409	0.381789	0.3569	0.504	0.4798	0.3495	0.2556	0.36	0.52	0.5	0.32	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.610344	NA	NA	NA	NA	NA	0.377	NA	4.6431
1188	19	45868038	45868038	G	A	intronic	ERCC2	NA	NA	NA	intronic	ENSG00000104884	NA	NA	NA	NA	NA	19q13.32	NA	Name=AP-2gamma	NA	NA	rs1799786	0.19	0.19	0.189	0.19389	0.3569	0.0496	0.1945	0.0734	0.3374	0.37	0.07	0.19	0.06	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.448757	NA	NA	NA	NA	NA	0.21	NA	4.6431
1188	19	53727392	53727392	T	C	intergenic	ZNF818P,ZNF677	dist=8037;dist=11246	NA	NA	ncRNA_exonic	ENSG00000267809	NA	NA	NA	Score=732;Name=lod=1253	NA	19q13.42	NA	NA	NA	NA	rs10401578	0.48	0.48	0.487	0.511781	0.3569	0.746	0.4078	0.4728	0.5562	0.34	0.74	0.42	0.43	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.834665	1.834665	NA	NA	NA	ID=COSN165925;OCCURENCE=2(breast)	0.449	NA	4.6431
1188	19	53727644	53727644	T	C	intergenic	ZNF818P,ZNF677	dist=8289;dist=10994	NA	NA	ncRNA_exonic	ENSG00000267809	NA	NA	NA	Score=732;Name=lod=1253	NA	19q13.42	NA	NA	NA	NA	rs12972588	0.48	0.48	0.43	0.511581	0.3569	0.746	0.4092	0.4705	0.5573	0.34	0.74	0.41	0.43	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.292226	1.292226	1	NA	NA	ID=COSN165929;OCCURENCE=1(NS)	0.449	NA	4.6431
1188	21	15297474	15297474	A	T	intergenic	C21orf15,ANKRD20A11P	dist=76789;dist=18622	NA	NA	ncRNA_intronic	ENSG00000215559	NA	NA	NA	Score=289;Name=lod=20	NA	21q11.2	NA	NA	NA	NA	rs2210212	0.25	0.25	NA	0.223043	0.3569	0.1558	0.3963	0.1021	0.1953	0.35	0.19	0.35	0.11	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.271861	NA	NA	NA	NA	NA	NA	NA	4.6431
1188	10	71392692	71392692	T	C	exonic	C10orf35	NA	synonymous SNV	C10orf35:NM_145306:exon4:c.T243C:p.L81L	exonic	ENSG00000171224	NA	synonymous SNV	ENSG00000171224:ENST00000373279:exon4:c.T243C:p.L81L	NA	NA	10q22.1	Score=846;Name=V$RFX1_02	NA	NA	NA	rs1052152	0.73	0.73	0.703	0.711062	0.665	0.8919	0.7406	0.6067	0.6922	0.68	0.89	0.72	0.62	0.6918	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.457356	NA	NA	0.66686	0.626645	NA	0.696	NA	4.6430066
1188	8	142202856	142202856	C	T	intronic	DENND3	NA	NA	NA	exonic	ENSG00000105339	NA	unknown	UNKNOWN	NA	NA	8q24.3	NA	Name=Pol2	NA	NA	rs6990186	0.46	0.46	0.407	0.46905	0.3976	0.6617	0.4553	0.3298	0.5419	0.37	0.67	0.5	0.33	0.4596	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.261697	NA	0	NA	NA	NA	0.457	NA	4.6428
1188	6	159205632	159205632	C	T	intronic	EZR	NA	NA	NA	intronic	ENSG00000092820	NA	NA	NA	NA	NA	6q25.3	NA	Name=Pol2(b),GR	Name=68	NA	rs9364995	0.33	0.33	0.327	0.333067	0.4742	0.1935	0.2608	0.2814	0.453	0.48	0.16	0.32	0.29	0.405	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.969025	NA	NA	0.478023	0.324784	NA	0.312	NA	4.642777
1188	10	26880240	26880240	A	T	ncRNA_exonic	LINC00264	NA	NA	NA	ncRNA_exonic	ENSG00000233261	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs184478959	0.01	0.01	NA	0.00878594	0.0239	NA	0.0216	0.0015	0.0031	0.02	NA	0.03	0.002	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.029792	NA	NA	NA	NA	NA	NA	NA	4.6427666
1188	2	90139373	90139373	T	G	intergenic	MIR4436A,LOC654342	dist=1027405;dist=1685336	NA	NA	exonic	ENSG00000241244	NA	nonsynonymous SNV	ENSG00000241244:ENST00000492446:exon2:c.T144G:p.S48R	NA	NA	2p11.2	NA	NA	NA	NA	rs6760987	0.04	0.04	0.027	0.0377396	0.0696	0.0069	0.0476	0.0053	0.0736	0.08	0.01	0.02	0.01	0.055	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.189078	NA	NA	0.066056	0.020302	NA	0.007	NA	4.6426774
1188	8	144124548	144124548	G	A	intronic	C8orf31	NA	NA	NA	intronic	ENSG00000177335	NA	NA	NA	NA	NA	8q24.3	NA	NA	Name=34	NA	rs78041945	0.11	0.11	0.105	0.114018	0.1163	0.1815	0.1643	0.0113	0.1452	0.1	0.17	0.18	0.02	0.1254	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.704188	NA	NA	0.115814	0.024739	NA	0.065	NA	4.642486
1188	7	121944527	121944527	T	C	ncRNA_UTR5	FEZF1	NA	NA	NA	ncRNA_UTR5	ENSG00000128610	NA	NA	NA	NA	NA	7q31.32	NA	Name=ZNF263	Name=51	NA	rs11761299	0.62	0.62	0.606	0.622804	0.6909	0.6042	0.6066	0.587	0.6319	0.7	0.59	0.6	0.57	0.6592	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.737151	NA	NA	0.674186	0.63527	NA	0.601	NA	4.6423806
1188	10	8556719	8556719	G	A	intergenic	GATA3,NONE	dist=439555;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000213771	NA	NA	NA	Score=743;Name=lod=1398	NA	10p14	NA	NA	NA	NA	rs61829474	0.35	0.35	0.343	0.351837	0.3579	0.3145	0.3631	0.3669	0.3558	0.34	0.36	0.35	0.36	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.064906	NA	NA	NA	NA	NA	0.232	NA	4.6421
1188	11	89466732	89466732	C	A	intergenic	TRIM77,TRIM49	dist=15692;dist=64091	NA	NA	ncRNA_exonic	ENSG00000255540	NA	NA	NA	Score=691;Name=lod=854	NA	11q14.3	NA	NA	NA	NA	rs17221829	0.25	0.25	0.241	0.227636	0.3579	0.2996	0.2968	0.028	0.2403	0.34	0.32	0.28	0.03	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.268757	NA	NA	NA	NA	NA	0.283	NA	4.6421
1188	8	144944176	144944176	T	C	exonic	EPPK1	NA	synonymous SNV	EPPK1:NM_031308:exon1:c.A3246G:p.E1082E	exonic	ENSG00000227184	NA	synonymous SNV	ENSG00000227184:ENST00000525985:exon2:c.A3246G:p.E1082E	Score=393;Name=lod=53	NA	8q24.3	NA	NA	NA	NA	rs12542653	0.54	0.54	0.516	0.534545	0.6879	0.2798	0.683	0.4841	0.6022	0.69	0.28	0.69	0.49	0.6361	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.606433	NA	NA	0.700995	0.56611	NA	0.507	NA	4.6416716
1188	1	220799213	220799213	A	G	intronic	MARK1	NA	NA	NA	ncRNA_exonic	ENSG00000233012	NA	NA	NA	Score=766;Name=lod=1736	NA	1q41	NA	NA	NA	NA	rs2378400	0.55	0.55	0.509	0.529553	0.6918	0.5367	0.598	0.3215	0.5879	0.68	0.51	0.62	0.36	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.721147	NA	NA	NA	NA	ID=COSN163443;OCCURENCE=1(breast)	0.493	NA	4.6415333
1188	5	55571341	55571341	T	A	intergenic	ANKRD55,MAP3K1	dist=42155;dist=539559	NA	NA	ncRNA_exonic	ENSG00000248781	NA	NA	NA	Score=836;Name=lod=3324	NA	5q11.2	NA	NA	NA	NA	rs44058	0.42	0.42	0.392	0.429513	0.3588	0.6081	0.4179	0.3343	0.455	0.35	0.58	0.43	0.35	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.189411	NA	NA	NA	NA	NA	0.362	NA	4.6412
1188	1	228432987	228432987	G	C	intronic	OBSCN	NA	NA	NA	intronic	ENSG00000154358	NA	NA	NA	NA	NA	1q42.13	NA	Name=KAP1	NA	NA	rs1757129	0.29	0.29	0.278	0.279752	0.3588	0.1597	0.3501	0.3374	0.1943	0.36	0.16	0.37	0.29	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.683495	NA	NA	NA	NA	NA	0.333	NA	4.6412
1188	5	19473917	19473917	G	A	intronic	CDH18	NA	NA	NA	intronic	ENSG00000145526	NA	NA	NA	NA	NA	5p14.3	NA	NA	Name=4	NA	rs770303	0.32	0.32	0.321	0.335463	0.3588	0.2004	0.3213	0.4123	0.3569	0.36	0.22	0.31	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.504581	NA	NA	NA	NA	NA	0.261	NA	4.6412
1188	6	32797620	32797620	C	T	intronic	TAP2	NA	NA	NA	intronic	ENSG00000204267,ENSG00000250264	NA	NA	NA	NA	NA	6p21.32	NA	Name=ZNF263	NA	NA	rs241438	0.37	0.37	0.347	0.374601	0.3588	0.5169	0.3818	0.2254	0.4407	0.35	0.51	0.37	0.23	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.019548	NA	NA	NA	NA	NA	0.275	NA	4.6412
1188	12	124184482	124184482	G	C	intronic	TCTN2	NA	NA	NA	intronic	ENSG00000168778	NA	NA	NA	NA	NA	12q24.31	NA	NA	Name=2	NA	rs73219037	0.27	0.27	0.264	0.272364	0.3588	0.0565	0.2291	0.3979	0.2669	0.36	0.05	0.25	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.138127	NA	NA	NA	NA	NA	0.21	NA	4.6412
1188	3	48463711	48463711	T	C	intronic	PLXNB1	NA	NA	NA	intronic	ENSG00000164050	NA	NA	NA	NA	NA	3p21.31	NA	Name=CTCF	Name=4	NA	rs9883927	0.38	0.38	0.391	0.38139	0.4642	0.3135	0.3112	0.4607	0.3088	0.45	0.29	0.33	0.42	0.424	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.67964	NA	NA	0.470923	0.459147	NA	0.464	NA	4.640877
1188	9	72897434	72897434	G	A	exonic	SMC5	NA	nonsynonymous SNV	SMC5:NM_015110:exon7:c.G916A:p.V306I	exonic	ENSG00000198887	NA	nonsynonymous SNV	ENSG00000198887:ENST00000361138:exon7:c.G916A:p.V306I	NA	NA	9q21.12	NA	NA	NA	NA	rs1180116	0.87	0.87	0.857	0.855032	0.9066	0.8532	0.902	0.7738	0.8804	0.9	0.86	0.91	0.79	0.8824	0.91	0.57	T	0.0	B	0.001	B	0.054	N	1.000	P	-0.255	N	2.34	T	-1.035	T	0.000	T	0.029	0.047	4.257	-1.31	-0.106	-0.059	0.504	0.046766	NA	0.43	0.903837	0.761916	NA	0.899	NA	4.6404964
1188	12	49498130	49498130	G	T	intronic	LMBR1L	NA	NA	NA	intronic	ENSG00000139636	NA	NA	NA	NA	NA	12q13.12	NA	NA	Name=13	NA	rs10783302	0.52	0.52	0.522	0.535144	0.3598	0.6776	0.3919	0.593	0.592	0.36	0.72	0.43	0.58	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.844954	NA	NA	NA	NA	NA	0.507	NA	4.6402
1188	15	34666128	34666128	C	T	intergenic	LPCAT4,GOLGA8A	dist=6733;dist=5142	NA	NA	ncRNA_exonic	ENSG00000259904	NA	NA	NA	Score=848;Name=lod=3716	NA	15q14	NA	NA	NA	NA	rs4984216	0.37	0.37	0.025	0.373003	0.3598	0.4097	0.3718	0.3041	0.4427	0.35	0.4	0.39	0.34	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.177385	NA	NA	NA	NA	NA	NA	NA	4.6402
1188	16	75338855	75338855	C	T	intronic	CFDP1	NA	NA	NA	intronic	ENSG00000153774	NA	NA	NA	NA	NA	16q23.1	NA	Name=Pol2	NA	NA	rs3743607	0.36	0.36	0.333	0.327875	0.3598	0.5248	0.4438	0.0651	0.365	0.37	0.51	0.43	0.1	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.027464	NA	NA	NA	NA	NA	0.217	NA	4.6402
1188	2	15537641	15537641	T	C	intronic	NBAS	NA	NA	NA	ncRNA_exonic	ENSG00000229087	NA	NA	NA	Score=702;Name=lod=950	NA	2p24.3	NA	NA	NA	NA	rs13017859	0.53	0.53	0.53	0.527955	0.6938	0.2242	0.6282	0.5673	0.546	0.67	0.26	0.64	0.56	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.485522	NA	NA	NA	NA	NA	0.681	NA	4.6395333
1188	2	15537863	15537863	T	C	intronic	NBAS	NA	NA	NA	ncRNA_exonic	ENSG00000229087	NA	NA	NA	Score=702;Name=lod=950	NA	2p24.3	NA	NA	NA	NA	rs6760888	0.53	0.53	0.552	0.528554	0.6938	0.2252	0.6282	0.5673	0.5481	0.67	0.26	0.64	0.56	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.03989	NA	NA	NA	NA	NA	0.681	NA	4.6395333
1188	2	15537866	15537866	C	A	intronic	NBAS	NA	NA	NA	ncRNA_exonic	ENSG00000229087	NA	NA	NA	Score=702;Name=lod=950	NA	2p24.3	NA	NA	NA	NA	rs6745621	0.52	0.52	0.544	0.517971	0.6938	0.2252	0.6254	0.5371	0.5368	0.67	0.26	0.63	0.51	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.565022	NA	NA	NA	NA	NA	0.674	NA	4.6395333
1188	1	145021265	145021265	A	G	intronic	NBPF9,PDE4DIP	NA	NA	NA	intronic	ENSG00000178104	NA	NA	NA	NA	NA	1q21.1	NA	Name=SPT20	NA	NA	rs673110	NA	NA	NA	0.28155	0.3608	0.127	0.3401	0.3026	0.2894	NA	NA	NA	NA	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.515479	NA	NA	NA	NA	NA	0.145	NA	4.6392
1188	3	72926390	72926390	A	G	intergenic	SHQ1,GXYLT2	dist=28792;dist=10995	NA	NA	ncRNA_exonic	ENSG00000240135	NA	NA	NA	Score=722;Name=lod=1141	NA	3p13	NA	NA	NA	NA	rs7610496	0.28	0.28	0.274	0.291534	0.3608	0.0437	0.2824	0.4917	0.2117	0.34	0.03	0.3	0.45	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.577286	NA	NA	NA	NA	NA	0.261	NA	4.6392
1188	7	65888470	65888470	T	C	intergenic	LINC00174,LOC493754	dist=23075;dist=130083	NA	NA	ncRNA_exonic	ENSG00000231234	NA	NA	NA	Score=766;Name=lod=1732	NA	7q11.21	NA	NA	NA	NA	rs6947339	0.32	0.32	0.263	0.375399	0.3608	0.4563	0.3602	0.2345	0.5082	0.34	0.42	0.33	0.19	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.26487	NA	NA	NA	NA	NA	0.391	NA	4.6392
1188	13	39544663	39544663	C	T	intronic	STOML3	NA	NA	NA	intronic	ENSG00000133115	NA	NA	NA	NA	NA	13q13.3	NA	NA	Name=5	NA	rs9315639	0.37	0.37	0.367	0.326278	0.3608	0.5119	0.3444	0.18	0.2843	0.38	0.51	0.35	0.21	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.547402	NA	NA	NA	NA	NA	0.188	NA	4.6392
1188	4	54373464	54373464	C	T	ncRNA_intronic	LNX1-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000250930	NA	NA	NA	NA	NA	4q12	NA	Name=CEBPB	NA	NA	rs10021772	0.39	0.39	0.367	0.482029	0.3082	0.5208	0.3646	0.4713	0.7188	0.31	0.46	0.37	0.44	0.401	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.867882	NA	NA	0.318372	0.473445	ID=COSN167218;OCCURENCE=1(kidney),2(large_intestine),2(endometrium)	0.442	NA	4.6390946
1188	19	11327608	11327608	T	C	exonic	DOCK6	NA	synonymous SNV	DOCK6:NM_020812:exon30:c.A3876G:p.L1292L	exonic	ENSG00000130158	NA	synonymous SNV	ENSG00000130158:ENST00000319867:exon16:c.A1893G:p.L631L,ENSG00000130158:ENST00000294618:exon30:c.A3876G:p.L1292L	Score=569;Name=lod=274	NA	19p13.2	NA	NA	NA	NA	rs4804151	0.62	0.62	0.608	0.59345	0.6789	0.5794	0.5663	0.5885	0.546	0.66	0.56	0.6	0.62	0.6476	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.387075	NA	NA	0.701205	0.638836	NA	0.732	NA	4.6389616
1188	6	31382882	31382882	C	A	exonic	MICA	NA	nonsynonymous SNV	MICA:NM_000247:exon7:c.C1118A:p.A373D	ncRNA_UTR3	ENSG00000204520	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs9266825	0.34	0.34	0.302	0.342851	0.2992	0.2996	0.3516	0.4372	0.2986	0.3	0.28	0.4	0.44	0.3039	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.263672	NA	0.14	0.258014	0.378613	NA	0.217	NA	4.638886
1188	14	35704555	35704555	G	A	intronic	KIAA0391	NA	NA	NA	ncRNA_exonic	ENSG00000256243	NA	NA	NA	Score=722;Name=lod=1144	NA	14q13.2	NA	NA	NA	NA	rs12147110	0.64	0.64	0.608	0.582668	0.6948	0.747	0.7478	0.3011	0.5613	0.71	0.74	0.71	0.36	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.196407	NA	NA	NA	NA	NA	0.623	NA	4.6385333
1188	6	64258654	64258654	C	T	intergenic	LGSN,PTP4A1	dist=228772;dist=23266	NA	NA	ncRNA_exonic	ENSG00000213312	NA	NA	NA	Score=517;Name=lod=168	NA	6q12	NA	NA	NA	NA	rs1744153	0.36	0.36	0.33	0.396765	0.3618	0.3036	0.4741	0.4175	0.4458	0.37	0.28	0.44	0.4	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.221374	NA	NA	NA	NA	NA	0.297	NA	4.6382
1188	7	131387145	131387145	T	C	intergenic	PODXL,PLXNA4	dist=145769;dist=420946	NA	NA	ncRNA_exonic	ENSG00000236395	NA	NA	NA	Score=689;Name=lod=839	NA	7q32.3	NA	NA	NA	NA	rs11978012	0.49	0.49	0.495	0.510783	0.3618	0.378	0.4352	0.8366	0.4141	0.36	0.41	0.43	0.83	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.431703	NA	NA	NA	NA	NA	0.638	NA	4.6382
1188	17	79427822	79427822	C	T	intronic	BAHCC1	NA	NA	NA	intronic	ENSG00000171282	NA	NA	NA	NA	NA	17q25.3	Score=875;Name=V$MZF1_02	NA	NA	NA	rs3744148	0.5	0.5	0.472	0.486621	0.3618	0.8919	0.5014	0.267	0.4836	0.37	0.89	0.45	0.29	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.031308	NA	NA	NA	NA	NA	0.435	NA	4.6382
1188	22	47057197	47057197	C	T	intronic	GRAMD4	NA	NA	NA	intronic	ENSG00000075240	NA	NA	NA	NA	NA	22q13.31	NA	NA	Name=4	NA	rs2076708	0.34	0.34	0.335	0.320687	0.3618	0.3998	0.3876	0.2648	0.2249	0.35	0.4	0.42	0.21	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.657397	NA	NA	NA	NA	NA	0.268	NA	4.6382
1188	12	118509124	118509124	A	G	intronic	VSIG10	NA	NA	NA	intronic	ENSG00000176834	NA	NA	NA	Score=243;Name=lod=13	NA	12q24.23	NA	NA	NA	NA	rs11613924	0.12	0.12	0.105	0.127396	0.1163	0.1587	0.2017	0.0976	0.0941	0.11	0.13	0.18	0.08	0.1311	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.804901	1.804901	NA	0.11484	0.114912	NA	0.152	NA	4.63776
1188	11	102666037	102666037	A	G	ncRNA_intronic	WTAPP1	NA	NA	NA	ncRNA_intronic	ENSG00000255282	NA	NA	NA	NA	NA	11q22.2	NA	NA	NA	NA	rs17884145	0.04	0.04	0.045	0.0401358	0.006	NA	0.0202	0.1369	NA	0.01	NA	0.01	0.16	0.0154	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.663333	1.663333	NA	0.007676	0.107354	NA	0.043	NA	4.6375906
1188	8	6331758	6331758	G	A	intronic	MCPH1	NA	NA	NA	ncRNA_exonic	ENSG00000253550	NA	NA	NA	Score=622;Name=lod=450	NA	8p23.1	NA	NA	NA	NA	rs2979656	0.55	0.55	0.516	0.514377	0.6958	0.5	0.6859	0.205	0.6391	0.71	0.52	0.74	0.22	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.308365	NA	NA	NA	NA	NA	0.428	NA	4.6375333
1188	9	86920236	86920236	T	C	exonic	SLC28A3	NA	synonymous SNV	SLC28A3:NM_001199633:exon4:c.A267G:p.T89T,SLC28A3:NM_022127:exon5:c.A267G:p.T89T	exonic	ENSG00000197506	NA	synonymous SNV	ENSG00000197506:ENST00000376238:exon4:c.A267G:p.T89T,ENSG00000197506:ENST00000537648:exon5:c.A60G:p.T20T	NA	NA	9q21.33	NA	NA	NA	NA	rs7867504	0.53	0.53	0.535	0.563698	0.3211	0.6002	0.5764	0.8427	0.3896	0.31	0.58	0.5	0.85	0.4036	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.017584	NA	NA	0.304535	0.723105	NA	0.565	NA	4.6374316
1188	12	124417889	124417889	C	T	exonic	DNAH10	NA	synonymous SNV	DNAH10:NM_207437:exon76:c.C12954T:p.S4318S	exonic	ENSG00000197653	NA	synonymous SNV	ENSG00000197653:ENST00000409039:exon76:c.C12954T:p.S4318S	NA	NA	12q24.31	NA	NA	NA	NA	rs4930721	0.28	0.28	0.287	0.260583	0.3479	0.123	0.3228	0.3109	0.2004	0.34	0.14	0.31	0.31	0.3741	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.401232	NA	NA	0.307303	0.307692	NA	0.304	NA	4.6373636
1188	5	144608701	144608701	T	A	intergenic	KCTD16,PRELID2	dist=751757;dist=529881	NA	NA	ncRNA_exonic	ENSG00000215325	NA	NA	NA	Score=575;Name=lod=289	NA	5q32	NA	NA	NA	NA	rs6859959	0.32	0.32	0.336	0.308307	0.3628	0.0982	0.3055	0.5756	0.1094	0.35	0.08	0.31	0.56	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.125151	NA	1	NA	NA	NA	0.391	NA	4.6372
1188	12	52863732	52863732	C	T	intronic	KRT6C	NA	NA	NA	intronic	ENSG00000170465	NA	NA	NA	NA	NA	12q13.13	NA	Name=FOXA2_(SC-6554),FOXA1_(C-20)	NA	NA	rs434339	0.33	0.33	0.32	0.2502	0.3628	0.4812	0.2651	0.0242	0.1912	0.36	0.56	0.32	0.04	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.548765	NA	NA	NA	NA	NA	0.362	NA	4.6372
1188	1	201981355	201981355	G	C	intronic	ELF3	NA	NA	NA	ncRNA_intronic	ENSG00000249007	NA	NA	NA	NA	NA	1q32.1	NA	NA	Name=6	NA	rs55666208	0.32	0.32	0.325	0.34405	0.2435	0.3373	0.2363	0.5522	0.2495	0.23	0.34	0.2	0.52	0.2591	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.706813	NA	NA	0.193721	0.412807	NA	NA	NA	4.6370123
1188	1	65119397	65119397	A	G	intronic	CACHD1	NA	NA	NA	intronic	ENSG00000158966	NA	NA	NA	NA	NA	1p31.3	NA	NA	Name=20	NA	rs7518616	0.33	0.33	0.344	0.376797	0.0835	0.6349	0.2911	0.4387	0.3896	0.08	0.61	0.23	0.46	0.2066	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.086744	NA	NA	0.073953	0.396051	NA	0.391	NA	4.635947
1188	6	152809527	152809527	A	T	intronic	SYNE1	NA	NA	NA	intronic	ENSG00000131018	NA	NA	NA	Score=600;Name=lod=365	NA	6q25.2	NA	NA	NA	NA	rs9397106	0.57	0.57	0.583	0.589257	0.4503	0.748	0.3746	0.7368	0.5215	0.44	0.74	0.38	0.7	0.481	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.080306	NA	NA	0.432798	0.652292	NA	0.529	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118432.2;CLNDSDB=.;CLNDSDBID=.	4.635902
1188	11	124766128	124766128	A	G	exonic	ROBO4	NA	synonymous SNV	ROBO4:NM_019055:exon4:c.T645C:p.H215H	exonic	ENSG00000154133	NA	synonymous SNV	ENSG00000154133:ENST00000306534:exon4:c.T645C:p.H215H,ENSG00000154133:ENST00000533054:exon4:c.T210C:p.H70H	NA	NA	11q24.2	NA	NA	NA	NA	rs4078313	0.46	0.46	0.491	0.495807	0.334	0.4534	0.2853	0.8162	0.4223	0.33	0.49	0.26	0.77	0.3849	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.806016	NA	NA	0.312166	0.718083	NA	0.63	NA	4.6356006
1188	17	21207909	21207909	G	A	intronic	MAP2K3	NA	NA	NA	intronic	ENSG00000034152	NA	NA	NA	NA	NA	17p11.2	NA	Name=ZNF274	NA	NA	rs41301807	0.34	0.34	0.288	NA	NA	NA	NA	NA	NA	0.36	0.44	0.37	0.16	0.3644	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.74921	NA	NA	NA	NA	NA	0.196	NA	4.6356
1188	22	50312869	50312869	T	C	intronic	CRELD2	NA	NA	NA	intronic	ENSG00000184164	NA	NA	NA	NA	NA	22q13.33	NA	Name=NRSF	NA	NA	rs28562884	0.12	0.12	0.096	0.11242	0.1322	0.0546	0.0893	0.1369	0.135	0.15	0.06	0.1	0.15	0.1161	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.390713	1.390713	NA	0.116279	0.155697	NA	0.203	NA	4.635421
1188	4	96123981	96123981	C	T	exonic	UNC5C	NA	synonymous SNV	UNC5C:NM_003728:exon12:c.G2037A:p.A679A	exonic	ENSG00000182168	NA	synonymous SNV	ENSG00000182168:ENST00000453304:exon12:c.G2037A:p.A679A,ENSG00000182168:ENST00000513796:exon13:c.G2094A:p.A698A	NA	NA	4q22.3	Score=773;Name=V$MIF1_01	NA	NA	NA	rs3733212	0.6	0.6	0.591	0.584265	0.7167	0.3601	0.5375	0.73	0.5153	0.71	0.36	0.59	0.72	0.6213	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.441508	NA	NA	0.693256	0.714026	NA	0.652	NA	4.6354106
1188	17	30228656	30228656	G	A	UTR5	UTP6	NM_018428:c.-10C>T	NA	NA	UTR5	ENSG00000108651	ENST00000261708:c.-10C>T	NA	NA	NA	NA	17q11.2	NA	Name=Sin3Ak-20,Pol2-4H8,ZNF263,ELK4,Pol2(b),TBP,IRF1,USF-1,PAX5-C20,c-Myc,HEY1,NFKB,TAF7_(SQ-8),E2F6,Mxi1_(bHLH),NRSF,Pol2,Pol2(phosphoS2),GABP,USF2,TAF1,GTF2F1_(RAP-74),STAT1,Max,ELF1_(SC-631)	NA	NA	rs2074101	0.26	0.26	0.255	0.296925	0.2266	0.1528	0.3905	0.4387	0.2597	0.23	0.15	0.31	0.41	0.2508	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.722996	1.722996	NA	0.22093	0.408307	NA	0.348	NA	4.6350034
1189	15	29033713	29033713	T	C	ncRNA_intronic	LOC100289656	NA	NA	NA	ncRNA_intronic	ENSG00000232431	NA	NA	NA	NA	NA	15q13.1	NA	NA	NA	NA	rs113759030	0.07	0.07	0.059	0.0970447	0.0318	0.0387	0.0403	0.2156	0.1043	0.03	0.04	0.04	0.18	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.171385	NA	NA	NA	NA	NA	0.036	NA	4.6348666
1189	17	25757087	25757087	G	A	ncRNA_exonic	TBC1D3P5	NA	NA	NA	ncRNA_exonic	ENSG00000266433	NA	NA	NA	NA	NA	17q11.1	NA	NA	NA	NA	rs111809181	0.02	0.02	0.016	0.0101837	0.0318	NA	0.0245	0.0015	NA	0.03	NA	0.03	0.002	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.488304	NA	0	NA	NA	NA	NA	NA	4.6348666
1189	22	35799542	35799542	C	T	intronic	MCM5	NA	NA	NA	ncRNA_intronic	ENSG00000240293	NA	NA	NA	Score=464;Name=lod=103	NA	22q12.3	NA	Name=Pol2-4H8	NA	NA	rs713618	0.5	0.5	0.524	0.477436	0.5815	0.2877	0.5533	0.5567	0.4049	0.58	0.31	0.58	0.53	0.5307	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.007111	NA	NA	0.586395	0.548797	NA	0.601	NA	4.6347383
1189	19	41531597	41531597	C	G	intergenic	CYP2B6,CYP2A13	dist=7296;dist=62759	NA	NA	ncRNA_exonic	ENSG00000213908	NA	NA	NA	Score=532;Name=lod=194	NA	19q13.2	NA	NA	NA	NA	rs35930845	0.16	0.16	0.124	0.140575	0.1869	0.2669	0.1138	0.0121	0.1554	0.19	0.25	0.11	0.02	0.1786	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.170283	NA	NA	NA	NA	NA	0.188	NA	4.6345
1189	15	34521940	34521940	C	A	intronic	EMC4	NA	NA	NA	intronic	ENSG00000128463	NA	NA	NA	Score=497;Name=lod=139	NA	15q14	NA	NA	NA	NA	rs8033087	0.13	0.13	0.128	0.15635	0.1133	0.005	0.1052	0.3245	0.1656	0.11	0.0017	0.14	0.29	0.1277	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.613368	3.613368	NA	0.124709	0.277828	NA	0.116	NA	4.634291
1189	1	203799343	203799343	C	T	intronic	ZC3H11A	NA	NA	NA	intronic	ENSG00000058673	NA	NA	NA	NA	NA	1q32.1	NA	NA	Name=5	NA	rs12239438	0.06	0.06	0.055	0.0563099	0.1243	0.002	0.0476	0.0325	0.0808	0.12	0.0035	0.07	0.03	0.1064	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.644716	1.644716	NA	0.135094	0.049478	NA	0.029	NA	4.634206
1189	14	58471699	58471699	T	C	intronic	C14orf37	NA	NA	NA	intronic	ENSG00000139971	NA	NA	NA	Score=346;Name=lod=34	NA	14q23.1	NA	NA	NA	NA	rs727203	0.41	0.41	0.406	0.379792	0.3658	0.5853	0.3343	0.2799	0.3497	0.38	0.59	0.34	0.3	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.086974	NA	NA	NA	NA	NA	0.406	NA	4.6342
1189	7	47323456	47323456	A	G	exonic	TNS3	NA	synonymous SNV	TNS3:NM_022748:exon28:c.T3936C:p.N1312N	exonic	ENSG00000136205	NA	synonymous SNV	ENSG00000136205:ENST00000355730:exon25:c.T3216C:p.N1072N,ENSG00000136205:ENST00000311160:exon28:c.T3936C:p.N1312N,ENSG00000136205:ENST00000398879:exon28:c.T3936C:p.N1312N	Score=507;Name=lod=154	NA	7p12.3	NA	NA	NA	NA	rs3750164	0.7	0.7	0.69	0.702077	0.6819	0.6319	0.7781	0.7405	0.6892	0.67	0.71	0.75	0.7	0.6833	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.012327	NA	NA	0.667335	0.751433	NA	0.739	NA	4.6341316
1189	5	70858194	70858194	C	T	exonic	BDP1	NA	synonymous SNV	BDP1:NM_018429:exon38:c.C7590T:p.R2530R	exonic	ENSG00000145734	NA	synonymous SNV	ENSG00000145734:ENST00000525844:exon12:c.C1656T:p.R552R,ENSG00000145734:ENST00000358731:exon38:c.C7590T:p.R2530R	NA	NA	5q13.2	NA	NA	NA	NA	rs277941	0.34	0.34	0.315	0.323682	0.335	0.505	0.4928	0.1067	0.2986	0.33	0.51	0.44	0.1	0.3537	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.256354	NA	NA	0.344341	0.15124	NA	0.29	NA	4.6336256
1189	19	49120434	49120434	C	T	intronic	RPL18	NA	NA	NA	intronic	ENSG00000063177	NA	NA	NA	NA	NA	19q13.33	NA	Name=Pol2-4H8	NA	NA	rs369880	0.24	0.24	0.241	0.225439	0.1243	0.3859	0.1816	0.2292	0.1902	0.12	0.41	0.18	0.25	0.2421	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.459478	NA	NA	NA	NA	NA	0.225	NA	4.6336
1189	12	3757548	3757548	T	C	UTR3	EFCAB4B	NM_032680:c.*90A>G	NA	NA	UTR3	ENSG00000130038	ENST00000333750:c.*90A>G,ENST00000252322:c.*90A>G	NA	NA	NA	Name=Non-alcoholic fatty liver disease histology (lobular)	12p13.32	NA	NA	NA	NA	rs887304	0.85	0.85	NA	0.859425	0.6998	0.9911	0.8646	0.8926	0.8395	0.71	1	0.84	0.88	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.507593	NA	NA	NA	NA	NA	0.848	NA	4.6335334
1189	1	203797384	203797384	A	G	intronic	ZC3H11A	NA	NA	NA	intronic	ENSG00000058673	NA	NA	NA	NA	NA	1q32.1	NA	NA	Name=22	NA	rs36111209	0.06	0.06	0.05	0.0547125	0.1243	0.002	0.0476	0.0265	0.0808	0.12	0.0035	0.07	0.02	0.107	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.152572	NA	NA	0.135349	0.04562	NA	0.029	NA	4.633351
1189	6	12292772	12292772	G	T	intronic	EDN1	NA	NA	NA	intronic	ENSG00000078401	NA	NA	NA	NA	NA	6p24.1	NA	Name=Rad21,CTCF_(C-20),CTCF,Pol2,CTCF_(SC-5916),SMC3_(ab9263)	Name=117	NA	rs2070699	0.4	0.4	0.371	0.35623	0.4672	0.5446	0.5	0.0401	0.3732	0.47	0.56	0.46	0.05	0.4424	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.411013	1.411013	NA	0.457093	0.096913	NA	0.319	NA	4.633307
1189	1	201981354	201981354	T	C	intronic	ELF3	NA	NA	NA	ncRNA_intronic	ENSG00000249007	NA	NA	NA	NA	NA	1q32.1	NA	NA	Name=6	NA	rs56310296	0.33	0.33	0.325	0.349641	0.2435	0.3413	0.2709	0.5522	0.2495	0.23	0.35	0.22	0.52	0.263	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.673012	NA	NA	0.193533	0.411671	NA	NA	NA	4.6333003
1189	4	118496770	118496770	T	A	intergenic	TRAM1L1,NDST3	dist=490034;dist=458730	NA	NA	ncRNA_exonic	ENSG00000213492	NA	NA	NA	Score=714;Name=lod=1068	NA	4q26	NA	NA	NA	NA	rs2635362	0.38	0.38	0.34	0.341653	0.3668	0.5109	0.5418	0.1233	0.2945	0.37	0.52	0.51	0.12	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.135376	NA	NA	NA	NA	NA	0.326	NA	4.6332
1189	5	118837658	118837658	T	C	intronic	HSD17B4	NA	NA	NA	intronic	ENSG00000133835	NA	NA	NA	NA	NA	5q23.1	NA	NA	Name=5	NA	rs257969	0.3	0.3	0.262	0.258586	0.3668	0.4107	0.3804	0.0227	0.2229	0.39	0.36	0.37	0.03	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.145816	NA	NA	NA	NA	NA	0.203	NA	4.6332
1189	10	26243710	26243710	A	C	intronic	MYO3A	NA	NA	NA	intronic	ENSG00000095777	NA	NA	NA	NA	NA	10p12.1	NA	NA	Name=3	NA	rs12247318	0.28	0.28	0.273	0.286542	0.3668	0.2956	0.2349	0.1384	0.4315	0.38	0.29	0.22	0.17	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.691891	NA	NA	NA	NA	NA	0.203	NA	4.6332
1189	11	4232893	4232893	T	C	intergenic	LOC100506082,OR52B4	dist=9010;dist=155600	NA	NA	ncRNA_exonic	ENSG00000255387	NA	NA	NA	Score=756;Name=lod=1579	NA	11p15.4	NA	NA	NA	NA	rs10742256	0.25	0.25	0.223	0.2498	0.3668	0.2679	0.255	0.0227	0.4141	0.38	0.26	0.24	0.04	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.525888	NA	NA	NA	NA	NA	0.188	NA	4.6332
1189	15	75816649	75816649	A	C	intronic	PTPN9	NA	NA	NA	intronic	ENSG00000169410	NA	NA	NA	NA	NA	15q24.2	Score=751;Name=V$MEF2_04	NA	NA	NA	rs12904319	0.15	0.15	0.147	0.136182	0.1243	0.2778	0.0994	0.0514	0.1431	0.11	0.31	0.11	0.05	0.1169	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.633357	1.633357	NA	0.126339	0.058944	NA	0.08	NA	4.632461
1189	12	129559557	129559557	C	T	exonic	TMEM132D	NA	synonymous SNV	TMEM132D:NM_133448:exon9:c.G2163A:p.T721T	exonic	ENSG00000151952	NA	synonymous SNV	ENSG00000151952:ENST00000389441:exon4:c.G777A:p.T259T,ENSG00000151952:ENST00000422113:exon9:c.G2163A:p.T721T	NA	NA	12q24.33	Score=849;Name=V$HMX1_01	NA	NA	NA	rs10773594	0.64	0.64	0.654	0.644169	0.6769	0.5645	0.6888	0.6278	0.683	0.67	0.58	0.7	0.64	0.6687	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.002283	NA	NA	0.688721	0.652065	NA	0.529	NA	4.6323456
1189	5	54275119	54275119	A	G	UTR3	ESM1	NM_007036:c.*41T>C,NM_001135604:c.*41T>C	NA	NA	UTR3	ENSG00000164283	ENST00000381405:c.*41T>C,ENST00000381403:c.*41T>C	NA	NA	NA	NA	5q11.2	NA	Name=Pol2	NA	NA	rs3776032	0.22	0.22	0.203	0.229832	0.2217	0.2917	0.2262	0.0696	0.3937	0.24	0.32	0.2	0.07	0.2499	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.473494	NA	NA	0.229419	0.091693	NA	0.138	NA	4.6323144
1189	6	66547346	66547346	C	G	intergenic	SLC25A51P1,NONE	dist=47970;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000233859	NA	NA	NA	Score=784;Name=lod=2049	NA	6q12	NA	NA	NA	NA	rs2814092	0.18	0.18	0.173	0.150958	0.3678	0.0734	0.1844	0.0098	0.1748	0.37	0.05	0.23	0.02	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.10502	2.10502	NA	NA	NA	NA	0.203	NA	4.6322
1189	4	114263101	114263101	T	G	intronic	ANK2	NA	NA	NA	intronic	ENSG00000145362	NA	NA	NA	NA	NA	4q26	NA	Name=MafK_(ab50322)	NA	NA	rs62313243	0.06	0.06	0.053	0.0479233	0.1322	NA	0.0865	0.0083	0.0368	0.13	NA	0.11	0.01	0.0989	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.937976	NA	NA	0.136892	0.024091	NA	0.051	NA	4.632008
1189	8	42037630	42037630	C	T	intronic	PLAT	NA	NA	NA	intronic	ENSG00000104368	NA	NA	NA	NA	NA	8p11.21	NA	NA	Name=24	NA	rs2020923	0.11	0.11	0.083	0.103435	0.1143	0.1885	0.0706	0.0166	0.1452	0.12	0.17	0.08	0.03	0.1268	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.074238	NA	NA	0.127209	0.031094	NA	0.058	NA	4.631691
1189	1	43774878	43774878	C	T	intronic	TIE1	NA	NA	NA	intronic	ENSG00000066056	NA	NA	NA	NA	NA	1p34.2	NA	Name=CTCF	NA	NA	rs2282226	0.24	0.24	0.21	0.185104	0.3688	0.131	0.3401	0.0666	0.1022	0.38	0.14	0.34	0.06	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.635797	NA	NA	NA	NA	NA	0.312	NA	4.6312
1189	2	89161547	89161547	A	G	intergenic	MIR4436A,NONE	dist=49579;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000231486	NA	NA	NA	NA	NA	2p11.2	NA	Name=Pol2	NA	NA	rs232222	0.42	0.42	0.416	0.386382	0.3688	0.376	0.4308	0.4834	0.2526	0.35	0.41	0.42	0.52	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.177598	NA	NA	NA	NA	NA	0.225	NA	4.6312
1189	7	6974986	6974986	G	A	intergenic	CCZ1B,LOC100131257	dist=109060;dist=140415	NA	NA	ncRNA_intronic	ENSG00000242731	NA	NA	NA	NA	NA	7p22.1	NA	Name=ERalpha_a	NA	NA	rs4445138	0.45	0.45	0.322	0.433307	0.3688	0.5883	0.4006	0.3805	0.4346	0.41	0.54	0.45	0.42	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.454897	NA	NA	NA	NA	NA	0.043	NA	4.6312
1189	11	33596123	33596123	T	C	intronic	KIAA1549L	NA	NA	NA	intronic	ENSG00000110427	NA	NA	NA	NA	NA	11p13	NA	NA	Name=18	NA	rs2281379	0.47	0.47	0.477	0.490615	0.3688	0.3552	0.3732	0.7723	0.4581	0.38	0.37	0.39	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.188043	NA	NA	NA	NA	NA	0.435	NA	4.6312
1189	19	35614274	35614274	G	A	intronic	FXYD3	NA	NA	NA	intronic	ENSG00000089356	NA	NA	NA	NA	NA	19q13.12	NA	NA	Name=22	NA	rs937089	0.28	0.28	NA	0.341653	0.3688	0.254	0.2507	0.2927	0.5348	0.35	0.22	0.23	0.28	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.167965	NA	NA	NA	NA	NA	NA	NA	4.6312
1189	7	47739310	47739310	C	T	intergenic	C7orf65,LINC00525	dist=38064;dist=61764	NA	NA	intronic	ENSG00000136273	NA	NA	NA	NA	NA	7p12.3	NA	NA	NA	NA	NA	NA	NA	0.008	0.0105831	0.0358	0.003	0.0173	NA	0.002	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.466391	NA	NA	NA	NA	NA	NA	NA	4.6308667
1189	3	170371837	170371837	G	A	intergenic	SLC7A14,RPL22L1	dist=67974;dist=210828	NA	NA	ncRNA_exonic	ENSG00000213174	NA	NA	NA	Score=575;Name=lod=290	NA	3q26.2	NA	NA	NA	NA	rs6764448	0.33	0.33	0.334	0.32528	0.3698	0.4256	0.4294	0.0726	0.4438	0.36	0.46	0.39	0.08	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.0145	NA	NA	NA	NA	NA	0.304	NA	4.6302
1189	16	304803	304803	A	T	intronic	ITFG3	NA	NA	NA	intronic	ENSG00000167930,ENSG00000269881	NA	NA	NA	NA	Name=Mean corpuscular volume	16p13.3	NA	NA	NA	NA	rs7189020	0.6	0.6	0.603	0.633786	0.3698	0.6488	0.536	0.9448	0.5389	0.36	0.66	0.53	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.761518	NA	NA	NA	NA	NA	0.58	NA	4.6302
1189	16	55530762	55530762	G	T	intronic	MMP2	NA	NA	NA	intronic	ENSG00000087245	NA	NA	NA	NA	NA	16q12.2	NA	Name=Max,USF-1	NA	NA	rs171498	0.26	0.26	0.263	0.27476	0.3698	0.2758	0.2363	0.1286	0.4008	0.35	0.26	0.23	0.14	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.943335	1.943335	NA	NA	NA	NA	0.246	NA	4.6302
1189	19	33444707	33444707	C	T	exonic	CEP89	NA	synonymous SNV	CEP89:NM_032816:exon4:c.G306A:p.R102R	exonic	ENSG00000121289	NA	synonymous SNV	ENSG00000121289:ENST00000591698:exon2:c.G54A:p.R18R,ENSG00000121289:ENST00000305768:exon4:c.G306A:p.R102R,ENSG00000121289:ENST00000586984:exon4:c.G306A:p.R102R,ENSG00000121289:ENST00000590597:exon4:c.G306A:p.R102R	NA	NA	19q13.11	NA	NA	NA	NA	rs10411735	0.41	0.41	0.381	0.398363	0.331	0.3958	0.5807	0.3896	0.3528	0.33	0.42	0.51	0.42	0.3784	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.606117	1.606117	NA	0.327558	0.394008	NA	0.493	NA	4.6297086
1189	22	44602172	44602172	T	C	intronic	PARVG	NA	NA	NA	intronic	ENSG00000138964	NA	NA	NA	NA	NA	22q13.31	NA	NA	Name=5	NA	rs3842785	0.07	0.07	0.062	0.0513179	0.1392	NA	0.0764	0.0106	0.0511	0.14	NA	0.08	0.02	0.0984	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.139764	NA	NA	0.132791	0.033818	NA	0.087	NA	4.629609
1189	8	119209773	119209773	C	T	UTR3	SAMD12	NM_001101676:c.*176G>A	NA	NA	UTR3	ENSG00000177570	ENST00000409003:c.*176G>A,ENST00000453675:c.*176G>A	NA	NA	Score=374;Name=lod=44	NA	8q24.12	NA	NA	NA	NA	rs2514743	0.68	0.68	0.69	0.64397	0.7038	0.5169	0.6196	0.705	0.6483	0.72	0.6	0.65	0.73	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.027249	NA	NA	NA	NA	NA	0.681	NA	4.6295334
1189	19	57765432	57765432	A	G	exonic	ZNF805	NA	synonymous SNV	ZNF805:NM_001145078:exon3:c.A846G:p.K282K,ZNF805:NM_001023563:exon4:c.A1245G:p.K415K	exonic	ENSG00000204524	NA	synonymous SNV	ENSG00000204524:ENST00000354309:exon3:c.A846G:p.K282K,ENSG00000204524:ENST00000414468:exon4:c.A1245G:p.K415K,ENSG00000204524:ENST00000535550:exon4:c.A846G:p.K282K	NA	NA	19q13.43	NA	NA	NA	NA	rs8100154	0.39	0.39	0.304	0.367013	0.5746	0.1776	0.4481	0.2466	0.454	0.57	0.2	0.48	0.27	0.4627	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.547428	NA	NA	NA	NA	NA	0.384	NA	4.6293666
1189	8	145737286	145737286	G	A	intronic	RECQL4	NA	NA	NA	intronic	ENSG00000160957	NA	NA	NA	NA	NA	8q24.3	NA	Name=Pol2,GABP	NA	NA	rs756627	0.39	0.39	0.337	0.400559	0.4463	0.5357	0.4971	0.0772	0.5828	0.46	0.49	0.52	0.08	0.467	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.078131	NA	NA	0.457469	0.138554	NA	0.275	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000080895.1;CLNDSDB=.;CLNDSDBID=.	4.629231
1189	4	118496919	118496919	T	C	intergenic	TRAM1L1,NDST3	dist=490183;dist=458581	NA	NA	ncRNA_exonic	ENSG00000213492	NA	NA	NA	Score=624;Name=lod=457	NA	4q26	NA	NA	NA	NA	rs3811755	0.31	0.31	0.287	0.344449	0.3708	0.4762	0.2392	0.1021	0.5838	0.36	0.47	0.25	0.09	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.021519	NA	NA	NA	NA	NA	0.348	NA	4.6292
1189	10	131979	131979	C	T	intergenic	TUBB8,ZMYND11	dist=36801;dist=48426	NA	NA	ncRNA_intronic	ENSG00000232420	NA	NA	NA	NA	NA	10p15.3	NA	Name=CTCF	NA	NA	rs7902749	0.23	0.23	0.222	0.204673	0.3708	0.1161	0.3055	0.0696	0.2362	0.35	0.12	0.32	0.09	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.513001	NA	NA	NA	NA	NA	0.283	NA	4.6292
1189	12	96272246	96272246	C	T	intronic	CCDC38	NA	NA	NA	intronic	ENSG00000139343,ENSG00000165972	NA	NA	NA	NA	NA	12q23.1	NA	Name=HEY1,BCLAF1_(M33-P5B11)	NA	NA	rs11829518	0.25	0.25	0.238	0.222244	0.3708	0.0933	0.2075	0.2716	0.1462	0.38	0.07	0.21	0.27	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.616334	NA	NA	NA	NA	NA	0.355	NA	4.6292
1189	16	2120402	2120402	T	C	intronic	TSC2	NA	NA	NA	intronic	ENSG00000103197	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs7187438	0.37	0.37	0.417	0.393371	0.3708	0.2212	0.2968	0.7141	0.229	0.33	0.22	0.3	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.127828	NA	NA	NA	NA	NA	0.391	CLINSIG=untested;CLNDBN=Tuberous_sclerosis_syndrome;CLNREVSTAT=not;CLNACC=RCV000055373.1;CLNDSDB=GeneReviews:MedGen:OMIM:SNOMED_CT;CLNDSDBID=NBK1220:C0041341:191100:7199000	4.6292
1189	5	128301971	128301971	T	C	exonic	SLC27A6	NA	synonymous SNV	SLC27A6:NM_001017372:exon1:c.T141C:p.Y47Y,SLC27A6:NM_014031:exon2:c.T141C:p.Y47Y	exonic	ENSG00000113396	NA	synonymous SNV	ENSG00000113396:ENST00000262462:exon1:c.T141C:p.Y47Y,ENSG00000113396:ENST00000395266:exon2:c.T141C:p.Y47Y,ENSG00000113396:ENST00000506176:exon2:c.T141C:p.Y47Y	NA	NA	5q23.3	NA	NA	NA	NA	rs2577541	0.24	0.24	0.213	0.203474	0.3678	0.0585	0.255	0.171	0.1912	0.36	0.07	0.31	0.18	0.2919	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.606429	NA	NA	0.37814	0.216069	NA	0.138	NA	4.6288266
1189	15	40328665	40328665	G	A	exonic	SRP14	NA	synonymous SNV	SRP14:NM_003134:exon5:c.C280T:p.L94L	exonic	ENSG00000140319	NA	synonymous SNV	ENSG00000140319:ENST00000558720:exon4:c.C40T:p.L14L,ENSG00000140319:ENST00000560773:exon4:c.C40T:p.L14L,ENSG00000140319:ENST00000267884:exon5:c.C280T:p.L94L	Score=596;Name=lod=352	NA	15q15.1	NA	NA	NA	NA	rs8208	0.48	0.48	0.456	0.457867	0.7058	0.2728	0.4741	0.2973	0.5992	0.71	0.3	0.56	0.29	0.6117	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.313524	1.313524	NA	0.720373	0.381976	NA	0.478	NA	4.6287936
1189	11	113283477	113283477	A	G	exonic	DRD2	NA	synonymous SNV	DRD2:NM_016574:exon6:c.T852C:p.H284H,DRD2:NM_000795:exon7:c.T939C:p.H313H	exonic	ENSG00000149295	NA	synonymous SNV	ENSG00000149295:ENST00000346454:exon6:c.T852C:p.H284H,ENSG00000149295:ENST00000542968:exon6:c.T939C:p.H313H,ENSG00000149295:ENST00000544518:exon6:c.T936C:p.H312H,ENSG00000149295:ENST00000362072:exon7:c.T939C:p.H313H,ENSG00000149295:ENST00000538967:exon7:c.T945C:p.H315H,ENSG00000149295:ENST00000355319:exon8:c.T945C:p.H315H	Score=374;Name=lod=44	NA	11q23.2	NA	NA	NA	NA	rs6275	0.53	0.53	0.506	0.526558	0.6938	0.4712	0.6066	0.3434	0.6022	0.68	0.45	0.62	0.32	0.6411	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.805242	NA	NA	0.703096	0.387778	NA	0.486	NA	4.6286706
1189	4	156289900	156289900	C	T	exonic	MAP9	NA	synonymous SNV	MAP9:NM_001039580:exon5:c.G546A:p.L182L	exonic	ENSG00000164114	NA	synonymous SNV	ENSG00000164114:ENST00000379248:exon4:c.G327A:p.L109L,ENSG00000164114:ENST00000311277:exon5:c.G546A:p.L182L,ENSG00000164114:ENST00000424373:exon5:c.G546A:p.L182L,ENSG00000164114:ENST00000433024:exon5:c.G543A:p.L181L,ENSG00000164114:ENST00000515654:exon5:c.G546A:p.L182L	NA	NA	4q32.1	NA	NA	NA	NA	rs3733390	0.39	0.39	0.351	0.36901	0.3549	0.6419	0.3963	0.1649	0.3589	0.36	0.64	0.38	0.15	0.3594	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.868685	NA	NA	0.323837	0.182705	NA	0.246	NA	4.6285296
1189	1	6713114	6713114	C	T	intronic	DNAJC11	NA	NA	NA	intronic	ENSG00000007923	NA	NA	NA	NA	NA	1p36.31	NA	Name=c-Myc	NA	NA	rs2235564	0.32	0.32	0.334	0.324681	0.3718	0.1776	0.3213	0.4107	0.3139	0.35	0.2	0.36	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.686523	NA	NA	NA	NA	NA	0.399	NA	4.6282
1189	7	63720786	63720786	T	A	intronic	ZNF679	NA	NA	NA	intronic	ENSG00000197123	NA	NA	NA	Score=363;Name=lod=40	NA	7q11.21	NA	NA	NA	NA	rs199528622	NA	NA	NA	0.320887	0.3718	0.5853	0.3386	0.0756	0.3149	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.329875	NA	NA	NA	NA	NA	NA	NA	4.6282
1189	7	65976610	65976610	G	A	intergenic	LINC00174,LOC493754	dist=111215;dist=41943	NA	NA	ncRNA_exonic	ENSG00000234500	NA	NA	NA	Score=321;Name=lod=27	NA	7q11.21	NA	NA	NA	NA	rs6950137	0.38	0.38	0.313	0.407947	0.3718	0.5575	0.3977	0.2436	0.5204	0.37	0.55	0.38	0.21	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.414922	NA	NA	NA	NA	NA	0.399	NA	4.6282
1189	21	37412752	37412752	T	C	intronic	SETD4	NA	NA	NA	intronic	ENSG00000185917,ENSG00000268098	NA	NA	NA	NA	NA	21q22.12	NA	NA	Name=3	NA	rs2255858	0.36	0.36	0.349	0.378594	0.3718	0.3403	0.4121	0.3623	0.4233	0.37	0.3	0.41	0.37	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.813032	NA	NA	NA	NA	NA	0.362	NA	4.6282
1189	2	26536299	26536299	C	G	exonic	GPR113	NA	synonymous SNV	GPR113:NM_153835:exon6:c.G822C:p.P274P,GPR113:NM_001145169:exon8:c.G1212C:p.P404P,GPR113:NM_001145168:exon9:c.G1419C:p.P473P	exonic	ENSG00000173567	NA	synonymous SNV	ENSG00000173567:ENST00000541401:exon3:c.G228C:p.P76P,ENSG00000173567:ENST00000333478:exon6:c.G822C:p.P274P,ENSG00000173567:ENST00000447444:exon6:c.G822C:p.P274P,ENSG00000173567:ENST00000421160:exon8:c.G1212C:p.P404P,ENSG00000173567:ENST00000311519:exon9:c.G1419C:p.P473P	NA	NA	2p23.3	NA	NA	NA	NA	rs11886746	0.35	0.35	0.34	0.39976	0.328	0.3353	0.3228	0.4856	0.4785	0.31	0.28	0.35	0.49	0.3873	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.167408	NA	NA	0.323256	0.470268	NA	0.514	NA	4.6281106
1189	20	50407162	50407162	T	C	exonic	SALL4	NA	synonymous SNV	SALL4:NM_020436:exon2:c.A1860G:p.T620T	exonic	ENSG00000101115	NA	synonymous SNV	ENSG00000101115:ENST00000217086:exon2:c.A1860G:p.T620T	NA	NA	20q13.2	NA	NA	NA	NA	rs6021437	0.37	0.37	0.311	0.381989	0.336	0.6071	0.3415	0.1982	0.4744	0.32	0.57	0.36	0.2	0.3578	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.682597	NA	NA	0.345	0.218339	NA	0.312	NA	4.6278666
1189	1	150960350	150960350	A	C	exonic	ANXA9	NA	synonymous SNV	ANXA9:NM_003568:exon10:c.A615C:p.A205A	exonic	ENSG00000143412	NA	synonymous SNV	ENSG00000143412:ENST00000368947:exon10:c.A615C:p.A205A	NA	NA	1q21.3	NA	NA	NA	NA	rs7532008	0.45	0.45	0.47	0.491813	0.3429	0.5813	0.4092	0.5106	0.5859	0.33	0.6	0.42	0.49	0.3926	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.270879	NA	NA	0.303605	0.449841	NA	0.399	NA	4.6275616
1189	1	228471379	228471379	G	C	exonic	OBSCN	NA	synonymous SNV	OBSCN:NM_001098623:exon33:c.G8913C:p.R2971R,OBSCN:NM_052843:exon33:c.G8913C:p.R2971R,OBSCN:NM_001271223:exon38:c.G10200C:p.R3400R	exonic	ENSG00000154358	NA	synonymous SNV	ENSG00000154358:ENST00000366706:exon11:c.G2457C:p.R819R,ENSG00000154358:ENST00000359599:exon22:c.G5454C:p.R1818R,ENSG00000154358:ENST00000284548:exon33:c.G8913C:p.R2971R,ENSG00000154358:ENST00000366707:exon33:c.G270C:p.R90R,ENSG00000154358:ENST00000366709:exon33:c.G270C:p.R90R,ENSG00000154358:ENST00000422127:exon33:c.G8913C:p.R2971R,ENSG00000154358:ENST00000570156:exon38:c.G10200C:p.R3400R	NA	NA	1q42.13	NA	NA	NA	NA	rs56168609	0.26	0.26	0.227	0.230232	0.3499	0.1528	0.3242	0.1989	0.1626	0.35	0.15	0.35	0.17	0.3214	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.622477	NA	NA	0.368129	0.246707	NA	0.268	NA	4.6272376
1189	22	23063645	23063645	T	G	intergenic	GGTLC2,MIR650	dist=73277;dist=101625	NA	NA	downstream	ENSG00000211663	NA	NA	NA	Score=461;Name=lod=100	NA	22q11.22	NA	Name=IRF4_(M-17),PU.1,NRSF,BATF,Pbx3,Pol2-4H8,PAX5-N19	Name=37	NA	rs11090173	0.77	0.77	0.788	0.791534	0.6133	0.9187	0.7421	0.9024	0.729	0.61	0.92	0.72	0.88	0.6745	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.125141	NA	NA	0.585162	0.863501	NA	0.703	NA	4.627038
1189	20	44756891	44756891	G	A	intronic	CD40	NA	NA	NA	intronic	ENSG00000101017	NA	NA	NA	NA	NA	20q13.12	NA	Name=Pol2	NA	NA	rs3765456	0.18	0.18	0.186	0.182308	0.1183	0.4177	0.1037	0.087	0.1902	0.12	0.38	0.12	0.09	0.1409	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.861443	NA	NA	0.113953	0.113936	NA	0.13	NA	4.626847
1189	15	79224683	79224683	C	T	intronic	CTSH	NA	NA	NA	intronic	ENSG00000103811	NA	NA	NA	NA	Name=Bipolar disorder	15q25.1	NA	NA	NA	NA	rs2289700	0.32	0.32	0.325	0.306709	0.0994	0.6389	0.3213	0.3714	0.0798	0.1	0.64	0.23	0.34	0.1768	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.099089	NA	NA	0.097368	0.34449	NA	0.304	NA	4.626432
1189	3	53886912	53886912	C	T	exonic	IL17RB	NA	synonymous SNV	IL17RB:NM_018725:exon5:c.C369T:p.Y123Y	exonic	ENSG00000056736	NA	synonymous SNV	ENSG00000056736:ENST00000288167:exon5:c.C369T:p.Y123Y,ENSG00000056736:ENST00000494338:exon5:c.C369T:p.Y123Y	NA	NA	3p21.1	NA	NA	NA	NA	rs3733075	0.44	0.44	0.447	0.429313	0.3449	0.5913	0.3228	0.4281	0.4264	0.33	0.64	0.35	0.42	0.3667	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.341954	NA	NA	0.328837	0.403995	NA	0.435	NA	4.6262296
1189	1	164312587	164312587	G	A	intergenic	NUF2,PBX1	dist=987034;dist=216010	NA	NA	ncRNA_exonic	ENSG00000225719	NA	NA	NA	NA	NA	1q23.3	NA	Name=PU.1	NA	NA	rs555162	0.4	0.4	0.382	0.355631	0.3738	0.5823	0.3746	0.2231	0.2689	0.37	0.6	0.41	0.21	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.283701	NA	NA	NA	NA	NA	0.283	NA	4.6262
1189	9	138457482	138457482	C	A	intronic	PAEP	NA	NA	NA	intronic	ENSG00000122133	NA	NA	NA	NA	NA	9q34.3	NA	Name=CTCFL_(SC-98982),CTCF	NA	NA	rs783774	0.12	0.12	0.105	0.147963	0.1849	0.0367	0.1239	0.1566	0.2301	0.17	0.03	0.13	0.13	0.189	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.613616	NA	NA	NA	NA	NA	0.174	NA	4.6261
1189	8	81905397	81905397	A	G	exonic	PAG1	NA	synonymous SNV	PAG1:NM_018440:exon4:c.T66C:p.A22A	exonic	ENSG00000076641	NA	synonymous SNV	ENSG00000076641:ENST00000220597:exon4:c.T66C:p.A22A	NA	NA	8q21.13	NA	NA	NA	NA	rs2016465	0.5	0.5	0.469	0.523962	0.326	0.5268	0.3156	0.8487	0.4335	0.33	0.55	0.35	0.83	0.392	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.603419	NA	NA	0.323023	0.737631	NA	0.449	NA	4.6256436
1189	19	55014172	55014172	A	T	intronic	LAIR2	NA	NA	NA	intronic	ENSG00000167618	NA	NA	NA	Score=243;Name=lod=13	NA	19q13.42	NA	NA	NA	NA	rs73070113	0.07	0.07	0.063	0.057508	0.1392	0.0188	0.0836	0.0023	0.0695	0.13	0.02	0.1	0.01	0.0975	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.10101	2.10101	NA	0.137674	0.023377	NA	0.138	NA	4.625626
1189	9	19026946	19026946	C	G	intronic	FAM154A	NA	NA	NA	ncRNA_exonic	ENSG00000236680	NA	NA	NA	Score=855;Name=lod=3965	NA	9p22.1	NA	NA	NA	NA	rs4483249	0.67	0.67	0.685	0.684505	0.7078	0.5635	0.5893	0.8336	0.6513	0.69	0.57	0.63	0.8	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.344498	NA	NA	NA	NA	NA	0.587	NA	4.6255333
1189	11	95569253	95569253	A	C	intronic	MTMR2	NA	NA	NA	intronic	ENSG00000087053	NA	NA	NA	NA	NA	11q21	NA	Name=RFX5_(N-494),FOXA1_(C-20),SMC3_(ab9263),CTCF,CEBPB,GTF2F1_(RAP-74)	NA	NA	rs627568	0.27	0.27	0.267	0.205471	0.3748	0.2569	0.2349	0.0734	0.136	0.37	0.28	0.28	0.08	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.624167	NA	NA	NA	NA	NA	0.246	NA	4.6252
1189	12	124171323	124171323	T	C	intronic	TCTN2	NA	NA	NA	intronic	ENSG00000168778	NA	NA	NA	NA	NA	12q24.31	NA	NA	Name=2	NA	rs7297576	0.33	0.33	0.34	0.336062	0.3748	0.0605	0.3012	0.5643	0.2965	0.38	0.06	0.32	0.57	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.22612	NA	NA	NA	NA	NA	0.304	NA	4.6252
1189	15	91433265	91433265	C	G	intronic	FES	NA	NA	NA	intronic	ENSG00000182511	NA	NA	NA	NA	NA	15q26.1	NA	NA	Name=2	NA	rs4932376	0.45	0.45	0.285	0.452476	0.3748	0.7897	0.5778	0.1097	0.5593	0.36	0.8	0.54	0.11	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.00442	NA	NA	NA	NA	NA	0.326	NA	4.6252
1189	9	139973614	139973614	T	C	intronic	UAP1L1	NA	NA	NA	intronic	ENSG00000197355	NA	NA	NA	NA	NA	9q34.3	NA	NA	Name=4	NA	rs118178799	0.07	0.07	0.068	0.0549121	0.1421	NA	0.0937	0.0061	0.0603	0.15	NA	0.12	0.01	0.1013	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.517074	NA	NA	0.131487	0.029559	ID=COSN398932;OCCURENCE=1(lung)	0.022	NA	4.625113
1190	7	116557939	116557939	C	T	UTR3	CAPZA2	NM_006136:c.*18C>T	NA	NA	UTR3	ENSG00000198898	ENST00000361183:c.*18C>T,ENST00000458284:c.*280C>T,ENST00000426421:c.*374C>T	NA	NA	Score=732;Name=lod=1254	NA	7q31.2	NA	NA	NA	NA	rs3173936	0.27	0.27	0.254	0.259984	0.2336	0.3968	0.2867	0.1596	0.2628	0.23	0.38	0.26	0.19	0.2461	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.763409	1.763409	NA	0.228721	0.182025	NA	0.304	NA	4.6249124
1190	12	52863038	52863038	G	A	exonic	KRT6C	NA	synonymous SNV	KRT6C:NM_173086:exon9:c.C1503T:p.S501S	exonic	ENSG00000170465	NA	synonymous SNV	ENSG00000170465:ENST00000252250:exon9:c.C1503T:p.S501S	NA	NA	12q13.13	NA	NA	NA	NA	rs410562	0.33	0.33	0.252	0.2502	0.3628	0.4812	0.2651	0.0242	0.1912	0.36	0.56	0.32	0.04	0.3127	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.143798	NA	NA	0.366279	0.071266	NA	0.355	NA	4.6248876
1190	9	43400194	43400194	T	C	intergenic	LOC642929,SPATA31A6	dist=254710;dist=224308	NA	NA	ncRNA_exonic	ENSG00000229489	NA	NA	NA	Score=856;Name=lod=4027	NA	9p12	NA	NA	NA	NA	rs73648329	NA	NA	0.261	0.342252	0.3757	0.3948	0.3847	0.2179	0.3916	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.150654	NA	NA	NA	NA	NA	NA	NA	4.6243
1190	6	84233831	84233831	G	A	exonic	PRSS35	NA	nonsynonymous SNV	PRSS35:NM_153362:exon2:c.G671A:p.R224Q,PRSS35:NM_001170423:exon3:c.G671A:p.R224Q	exonic	ENSG00000146250	NA	nonsynonymous SNV	ENSG00000146250:ENST00000369700:exon2:c.G671A:p.R224Q,ENSG00000146250:ENST00000536636:exon3:c.G671A:p.R224Q	NA	NA	6q14.2	NA	NA	NA	NA	rs504593	0.96	0.96	0.958	0.967652	0.8936	1	0.9553	0.9962	0.9806	0.91	1	0.96	1	0.9218	1	0.63	T	0.002	B	0.0	B	0.313	N	1.000	P	0.41	N	0.88	T	-0.986	T	0.015	T	0.064	-1.092	0.15	-1.34	-0.874	-0.036	2.455	-1.092421	NA	0.63	0.89407	0.980708	NA	0.913	NA	4.6238634
1190	11	6632857	6632857	A	T	intronic	TAF10	NA	NA	NA	intronic	ENSG00000166337	NA	NA	NA	NA	NA	11p15.4	NA	Name=ZNF263,Pol2	Name=70	NA	rs1876300	0.41	0.41	0.389	0.415535	0.4692	0.5635	0.4827	0.1339	0.5409	0.47	0.55	0.47	0.13	0.451	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.734093	1.734093	NA	0.456208	0.176377	NA	0.326	NA	4.623592
1190	2	220417228	220417228	G	T	intronic	OBSL1	NA	NA	NA	intronic	ENSG00000124006	NA	NA	NA	NA	NA	2q35	NA	Name=HA-E2F1	Name=136	NA	rs60549465	0.4	0.4	0.343	0.339058	0.4682	0.3819	0.5101	0.2035	0.2239	0.48	0.4	0.45	0.23	0.4657	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.548677	1.548677	NA	0.442586	0.248791	NA	0.377	NA	4.623514
1190	5	149919739	149919739	G	C	exonic	NDST1	NA	synonymous SNV	NDST1:NM_001543:exon8:c.G1662C:p.T554T	exonic	ENSG00000070614	NA	synonymous SNV	ENSG00000070614:ENST00000261797:exon8:c.G1662C:p.T554T,ENSG00000070614:ENST00000523767:exon8:c.G1662C:p.T554T	Score=632;Name=lod=492	NA	5q33.1	NA	NA	NA	NA	rs1290147	0.78	0.78	0.777	0.806909	0.673	0.7808	0.7233	0.969	0.8119	0.67	0.81	0.73	0.96	0.7156	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.196385	NA	NA	0.654651	0.922833	NA	0.71	NA	4.6234156
1190	7	142495127	142495127	G	T	intergenic	PRSS3P2,EPHB6	dist=12728;dist=57665	NA	NA	upstream;downstream	ENSG00000211771;ENSG00000211765,ENSG00000211766,ENSG00000211767,ENSG00000211768,ENSG00000211769,ENSG00000211770	NA	NA	NA	NA	NA	7q34	NA	Name=Pol2,SUZ12	Name=12	NA	rs12532978	0.29	0.29	0.268	NA	NA	NA	NA	NA	NA	0.46	0.15	0.38	0.14	0.3926	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.590167	NA	0.01	0.484386	0.195641	NA	NA	NA	4.623014
1190	1	47364788	47364788	C	T	ncRNA_intronic	CYP4Z2P	NA	NA	NA	ncRNA_intronic	ENSG00000154198	NA	NA	NA	NA	NA	1p33	NA	NA	NA	NA	rs74728515	0.02	0.02	0.022	0.0151757	0.0437	NA	0.0245	0.0038	0.0102	0.04	NA	0.04	0.01	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.663914	NA	NA	NA	NA	NA	0.014	NA	4.6229666
1190	6	30457732	30457732	T	C	exonic	HLA-E	NA	synonymous SNV	HLA-E:NM_005516:exon2:c.T294C:p.N98N	exonic	ENSG00000204592	NA	synonymous SNV	ENSG00000204592:ENST00000376630:exon2:c.T294C:p.N98N	NA	NA	6p21.33	NA	Name=TAF1,Pol2,Ini1,Pol2-4H8,E2F6	NA	NA	rs1059510	0.69	0.69	0.68	0.72484	0.672	0.7083	0.6383	0.7383	0.8395	0.69	0.72	0.62	0.72	0.7036	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.274863	NA	NA	0.668392	0.743377	NA	0.732	NA	4.6226746
1190	4	76580894	76580894	G	A	intronic	G3BP2	NA	NA	NA	intronic	ENSG00000138757	NA	NA	NA	NA	NA	4q21.1	NA	NA	Name=3	NA	rs17000733	0.32	0.32	0.303	0.291733	0.3777	0.0685	0.2781	0.528	0.1237	0.38	0.06	0.3	0.53	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.494724	NA	NA	NA	NA	NA	0.406	NA	4.6223
1190	11	119548698	119548698	T	G	intronic	PVRL1	NA	NA	NA	intronic	ENSG00000110400	NA	NA	NA	NA	NA	11q23.3	NA	Name=KAP1	NA	NA	rs2292293	0.46	0.46	0.45	0.4375	0.3777	0.5377	0.5086	0.444	0.3364	0.39	0.53	0.49	0.47	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.616994	NA	NA	NA	NA	NA	0.326	NA	4.6223
1190	15	71152309	71152309	G	A	intergenic	LARP6,THAP10	dist=5811;dist=21372	NA	NA	ncRNA_exonic	ENSG00000259470	NA	NA	NA	NA	NA	15q23	NA	Name=CTCF	NA	NA	rs111566682	0.26	0.26	0.237	0.242212	0.3777	0.244	0.3617	0.0287	0.3047	0.37	0.25	0.36	0.04	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.964038	NA	NA	NA	NA	NA	0.13	NA	4.6223
1190	16	1255277	1255277	C	T	intronic	CACNA1H	NA	NA	NA	intronic	ENSG00000196557	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs2745150	0.08	0.08	0.073	0.0902556	0.1203	0.0585	0.0807	0.0454	0.1595	0.13	0.05	0.09	0.05	0.1252	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.606482	NA	NA	0.132626	0.050579	NA	0.138	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000082069.1;CLNDSDB=.;CLNDSDBID=.	4.621874
1190	9	37745413	37745413	G	A	exonic	FRMPD1	NA	synonymous SNV	FRMPD1:NM_014907:exon16:c.G3384A:p.E1128E	exonic	ENSG00000070601	NA	synonymous SNV	ENSG00000070601:ENST00000377765:exon16:c.G3384A:p.E1128E,ENSG00000070601:ENST00000539465:exon16:c.G3384A:p.E1128E	NA	NA	9p13.2	NA	NA	NA	NA	rs3747541	0.37	0.37	0.373	0.386382	0.332	0.2024	0.4193	0.5847	0.3405	0.34	0.21	0.39	0.6	0.3634	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.071804	NA	NA	0.349419	0.521562	NA	0.312	NA	4.6218476
1190	7	128415290	128415290	C	T	intronic	OPN1SW	NA	NA	NA	intronic	ENSG00000128617	NA	NA	NA	NA	NA	7q32.1	NA	Name=Pol2(b)	NA	NA	rs17476081	0.21	0.21	0.217	0.179113	0.3787	0.0575	0.2277	0.1127	0.1544	0.37	0.05	0.27	0.13	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.072698	NA	NA	NA	NA	NA	0.232	NA	4.6213
1190	22	32346468	32346468	G	A	intronic	YWHAH	NA	NA	NA	intronic	ENSG00000128245	NA	NA	NA	NA	NA	22q12.3	NA	NA	Name=30	NA	rs4820059	0.23	0.23	0.184	0.22484	0.3787	0.1399	0.3501	0.0408	0.3139	0.37	0.13	0.33	0.05	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.347321	NA	NA	NA	NA	NA	0.159	NA	4.6213
1190	22	41471003	41471003	C	T	intergenic	RBX1,MIR1281	dist=101984;dist=17514	NA	NA	ncRNA_exonic	ENSG00000213857	NA	NA	NA	Score=867;Name=lod=4456	NA	22q13.2	NA	NA	NA	NA	rs5751033	0.33	0.33	0.342	0.296326	0.3787	0.5308	0.2478	0.0431	0.3466	0.37	0.54	0.27	0.05	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.115216	NA	NA	NA	NA	NA	0.348	NA	4.6213
1190	6	32948607	32948607	C	T	UTR3	BRD2	NM_005104:c.*112C>T,NM_001113182:c.*112C>T,NM_001199455:c.*112C>T,NM_001199456:c.*112C>T	NA	NA	UTR3	ENSG00000204256	ENST00000374825:c.*112C>T,ENST00000374831:c.*112C>T,ENST00000395289:c.*112C>T,ENST00000443797:c.*112C>T,ENST00000482914:c.*2166C>T,ENST00000395287:c.*112C>T,ENST00000449085:c.*112C>T,ENST00000449025:c.*112C>T	NA	NA	NA	NA	6p21.32	NA	Name=Pol2-4H8,Pol2(b)	NA	NA	rs1049414	0.64	0.64	0.694	0.684904	0.7127	0.7123	0.6931	0.5378	0.8211	0.68	0.68	0.65	0.53	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.511197	NA	NA	NA	NA	NA	NA	NA	4.6206334
1190	14	106471689	106471689	A	C	intergenic	ADAM6,LINC00226	dist=33331;dist=272580	NA	NA	UTR5	ENSG00000211935	ENST00000390595:c.-8T>G	NA	NA	NA	NA	14q32.33	NA	Name=Pol2,POU2F2,Oct-2	Name=2	NA	rs56372013	0.29	0.29	0.284	0.275759	0.4274	0.3006	0.3156	0.0802	0.3303	0.41	0.3	0.3	0.1	0.3657	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.032498	NA	NA	0.419619	0.129204	NA	0.217	NA	4.6206144
1190	2	3718692	3718692	C	T	UTR5	ALLC	NM_018436:c.-56C>T	NA	NA	UTR5	ENSG00000151360	ENST00000252505:c.-56C>T	NA	NA	Score=265;Name=lod=16	NA	2p25.3	NA	NA	NA	NA	rs13409104	0.37	0.37	0.384	0.345447	0.332	0.2976	0.2291	0.5454	0.2209	0.34	0.33	0.24	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.300972	NA	NA	0.380893	0.516618	NA	0.377	NA	4.6204404
1190	1	76107473	76107473	C	G	intergenic	SLC44A5,ACADM	dist=30674;dist=82570	NA	NA	ncRNA_exonic	ENSG00000230863	NA	NA	NA	Score=737;Name=lod=1315	NA	1p31.1	NA	NA	NA	NA	rs211715	0.6	0.6	0.595	0.616214	0.3797	0.9504	0.487	0.6309	0.5869	0.4	0.94	0.46	0.62	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.143516	NA	NA	NA	NA	NA	0.58	NA	4.6203
1190	1	113668998	113668998	C	G	intergenic	LRIG2,LOC643441	dist=1656;dist=70406	NA	NA	ncRNA_exonic	ENSG00000237278	NA	NA	NA	Score=454;Name=lod=93	NA	1p13.2	NA	NA	NA	NA	rs2840294	0.29	0.29	0.269	0.285343	0.3797	0.3631	0.2853	0.0658	0.4049	0.36	0.39	0.33	0.05	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.756912	2.756912	NA	NA	NA	NA	0.268	NA	4.6203
1190	7	138126534	138126534	A	G	intergenic	MIR4468,TRIM24	dist=317967;dist=18545	NA	NA	ncRNA_exonic	ENSG00000214815	NA	NA	NA	Score=850;Name=lod=3804	NA	7q33	NA	NA	NA	NA	rs752158	0.44	0.44	0.403	0.436901	0.3797	0.5099	0.5115	0.4107	0.4029	0.38	0.53	0.48	0.38	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.09978	NA	NA	NA	NA	NA	0.406	NA	4.6203
1190	9	36304017	36304017	G	A	intergenic	GNE,RNF38	dist=26964;dist=32382	NA	NA	ncRNA_exonic	ENSG00000215283	NA	NA	NA	Score=627;Name=lod=472	NA	9p13.2	NA	NA	NA	NA	rs10972836	0.24	0.24	0.233	0.202476	0.3797	0.2331	0.2233	0.0673	0.1564	0.37	0.21	0.25	0.09	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.548743	2.548743	NA	NA	NA	NA	0.246	NA	4.6203
1190	3	14489370	14489370	G	T	UTR3	SLC6A6	NM_001134368:c.*42G>T	NA	NA	UTR3	ENSG00000131389	ENST00000416216:c.*42G>T	NA	NA	NA	NA	3p25.1	NA	Name=GATA-2	NA	NA	rs2304511	0.2	0.2	0.189	0.221446	0.2386	0.0605	0.2104	0.3351	0.2239	0.22	0.08	0.22	0.29	0.2346	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.990278	NA	NA	0.240698	0.332501	NA	0.181	NA	4.6194354
1190	19	17728502	17728502	T	C	intronic	UNC13A	NA	NA	NA	intronic	ENSG00000130477	NA	NA	NA	NA	NA	19p13.11	NA	Name=CHD2_(N-1250),NF-YB,SP1,eGFP-JunD,NF-YA,SP2_(SC-643),E2F4,RFX5_(N-494),JunD	Name=65	NA	rs2287851	0.45	0.45	0.481	0.429313	0.492	0.1329	0.415	0.8147	0.1595	0.48	0.14	0.41	0.78	0.4163	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.479017	NA	NA	0.472341	0.773148	NA	0.507	NA	4.619359
1190	7	57484871	57484871	G	A	intergenic	MIR3147,ZNF716	dist=12075;dist=25012	NA	NA	ncRNA_exonic	ENSG00000235368	NA	NA	NA	Score=552;Name=lod=233	NA	7p11.2	NA	NA	NA	NA	rs11973574	0.33	0.33	0.299	0.344649	0.3807	0.2966	0.4769	0.2587	0.3793	0.37	0.27	0.43	0.28	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.188785	NA	NA	NA	NA	NA	0.225	NA	4.6193
1190	13	19521070	19521070	G	A	intergenic	ANKRD20A9P,LINC00442	dist=74961;dist=61329	NA	NA	ncRNA_exonic	ENSG00000226057	NA	NA	NA	Score=667;Name=lod=688	NA	13q12.11	NA	NA	NA	NA	rs970720	0.48	0.48	0.408	0.448283	0.3807	0.746	0.5965	0.2413	0.3855	0.37	0.75	0.53	0.28	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.355036	NA	NA	NA	NA	NA	0.341	NA	4.6193
1190	22	41470313	41470313	A	G	intergenic	RBX1,MIR1281	dist=101294;dist=18204	NA	NA	ncRNA_exonic	ENSG00000213857	NA	NA	NA	Score=867;Name=lod=4456	NA	22q13.2	NA	NA	NA	NA	rs5758212	0.33	0.33	0.332	0.297923	0.3807	0.5308	0.2579	0.0424	0.3466	0.37	0.54	0.28	0.05	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.972248	NA	NA	NA	NA	NA	0.348	NA	4.6193
1190	16	58030634	58030634	C	T	exonic	ZNF319	NA	synonymous SNV	ZNF319:NM_020807:exon2:c.G1536A:p.K512K	exonic	ENSG00000166188	NA	synonymous SNV	ENSG00000166188:ENST00000299237:exon2:c.G1536A:p.K512K	Score=566;Name=lod=266	NA	16q21	NA	NA	NA	NA	rs3743556	0.65	0.65	0.668	0.672324	0.6889	0.5377	0.4899	0.8048	0.7444	0.69	0.51	0.57	0.79	0.6698	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.73618	NA	NA	0.689186	0.77252	NA	0.717	NA	4.6187806
1190	1	40149551	40149551	G	C	intronic	HPCAL4	NA	NA	NA	intronic	ENSG00000116983	NA	NA	NA	NA	NA	1p34.2	NA	NA	Name=10	NA	rs11206617	0.3	0.3	0.269	0.280551	0.3817	0.0734	0.2867	0.4297	0.184	0.4	0.05	0.32	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.749812	NA	NA	NA	NA	NA	0.217	NA	4.6183
1190	2	38513478	38513478	C	T	intergenic	CYP1B1-AS1,ATL2	dist=104485;dist=8551	NA	NA	ncRNA_exonic	ENSG00000213594	NA	NA	NA	Score=601;Name=lod=369	NA	2p22.2	NA	NA	NA	NA	rs2373375	0.42	0.42	0.436	0.469449	0.3817	0.128	0.3775	0.8101	0.5164	0.4	0.14	0.39	0.81	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.714028	NA	NA	NA	NA	NA	0.449	NA	4.6183
1190	6	81265682	81265682	C	T	intergenic	BCKDHB,FAM46A	dist=209695;dist=1189765	NA	NA	ncRNA_exonic	ENSG00000216352	NA	NA	NA	Score=834;Name=lod=3270	NA	6q14.1	NA	NA	NA	NA	rs10806194	0.41	0.41	0.41	0.457069	0.3817	0.5317	0.513	0.3132	0.6125	0.36	0.52	0.46	0.33	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.417711	NA	NA	NA	NA	NA	0.362	NA	4.6183
1190	8	70516969	70516969	G	A	intronic	SULF1	NA	NA	NA	intronic	ENSG00000137573	NA	NA	NA	NA	NA	8q13.3	NA	Name=USF-1	NA	NA	rs4737284	0.48	0.48	0.356	0.457468	0.3817	0.5198	0.5086	0.4697	0.4182	0.38	0.55	0.53	0.53	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.087385	NA	NA	NA	NA	NA	0.275	NA	4.6183
1190	11	124386765	124386765	C	G	intergenic	OR8B8,OR8B12	dist=75784;dist=25853	NA	NA	ncRNA_exonic	ENSG00000254646	NA	NA	NA	Score=401;Name=lod=57	NA	11q24.2	NA	NA	NA	NA	rs10893237	0.53	0.53	0.458	0.499201	0.3817	0.6915	0.5821	0.5408	0.3067	0.38	0.69	0.57	0.56	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.077	NA	NA	NA	NA	NA	0.413	NA	4.6183
1190	21	40899177	40899177	G	A	intergenic	SH3BGR,C21orf88	dist=11744;dist=69898	NA	NA	ncRNA_exonic	ENSG00000235012	NA	NA	NA	NA	NA	21q22.2	NA	Name=MafF_(M8194),MafK_(SC-477),MafK_(ab50322)	NA	NA	rs1006601	0.41	0.41	0.381	0.390176	0.3817	0.7331	0.5115	0.0356	0.4387	0.38	0.72	0.49	0.05	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.39802	NA	NA	NA	NA	NA	0.457	NA	4.6183
1190	13	101264633	101264633	C	T	intronic	TMTC4	NA	NA	NA	intronic	ENSG00000125247	NA	NA	NA	NA	NA	13q32.3	NA	Name=NFKB	Name=25	NA	rs1572641	0.52	0.52	0.508	0.520567	0.4592	0.5883	0.5562	0.5098	0.5031	0.47	0.57	0.5	0.55	0.4979	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.981055	NA	NA	0.425116	0.493872	NA	0.493	NA	4.617784
1190	3	13670481	13670481	A	G	exonic	FBLN2	NA	synonymous SNV	FBLN2:NM_001998:exon11:c.A2505G:p.T835T,FBLN2:NM_001004019:exon12:c.A2646G:p.T882T,FBLN2:NM_001165035:exon12:c.A2646G:p.T882T	exonic	ENSG00000163520	NA	synonymous SNV	ENSG00000163520:ENST00000295760:exon11:c.A2505G:p.T835T,ENSG00000163520:ENST00000535798:exon11:c.A2583G:p.T861T,ENSG00000163520:ENST00000404922:exon12:c.A2646G:p.T882T,ENSG00000163520:ENST00000492059:exon12:c.A2646G:p.T882T	NA	NA	3p25.1	Score=821;Name=V$MEIS1AHOXA9_01	NA	NA	NA	rs2242023	0.7	0.7	0.634	0.677915	0.6928	0.7629	0.7896	0.5439	0.6769	0.68	0.78	0.8	0.56	0.6923	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.069165	NA	NA	0.664021	0.583142	NA	0.703	NA	4.6175456
1190	2	233681512	233681512	T	G	intronic	GIGYF2	NA	NA	NA	intronic	ENSG00000204120	NA	NA	NA	NA	NA	2q37.1	NA	NA	Name=6	NA	rs1078323	0.29	0.29	0.281	0.245607	0.3827	0.123	0.3804	0.2769	0.093	0.38	0.14	0.36	0.26	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.172902	NA	NA	NA	NA	NA	0.188	NA	4.6173
1190	12	76509636	76509636	G	A	intergenic	NAP1L1,BBS10	dist=30898;dist=228630	NA	NA	ncRNA_exonic	ENSG00000258304	NA	NA	NA	Score=304;Name=lod=23	NA	12q21.2	NA	NA	NA	NA	rs36158113	0.43	0.43	0.413	0.465256	0.3827	0.5655	0.4352	0.3449	0.6309	0.38	0.54	0.45	0.37	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.223647	NA	NA	NA	NA	NA	0.42	NA	4.6173
1190	16	75269534	75269534	C	T	exonic	BCAR1	NA	synonymous SNV	BCAR1:NM_001170721:exon4:c.G633A:p.P211P,BCAR1:NM_001170715:exon5:c.G1317A:p.P439P,BCAR1:NM_001170716:exon5:c.G1317A:p.P439P,BCAR1:NM_001170717:exon5:c.G1317A:p.P439P,BCAR1:NM_001170718:exon5:c.G1263A:p.P421P,BCAR1:NM_001170719:exon5:c.G1257A:p.P419P,BCAR1:NM_014567:exon5:c.G1263A:p.P421P,BCAR1:NM_001170714:exon6:c.G1401A:p.P467P,BCAR1:NM_001170720:exon6:c.G819A:p.P273P	exonic	ENSG00000050820	NA	synonymous SNV	ENSG00000050820:ENST00000162330:exon5:c.G1263A:p.P421P,ENSG00000050820:ENST00000393420:exon5:c.G1317A:p.P439P,ENSG00000050820:ENST00000393422:exon5:c.G1317A:p.P439P,ENSG00000050820:ENST00000420641:exon5:c.G1317A:p.P439P,ENSG00000050820:ENST00000538440:exon5:c.G1263A:p.P421P,ENSG00000050820:ENST00000542031:exon5:c.G1257A:p.P419P,ENSG00000050820:ENST00000546196:exon5:c.G1176A:p.P392P,ENSG00000050820:ENST00000418647:exon6:c.G1401A:p.P467P,ENSG00000050820:ENST00000535626:exon6:c.G819A:p.P273P	NA	NA	16q23.1	NA	NA	NA	NA	rs3743613	0.46	0.46	0.42	0.471845	0.3171	0.8512	0.3703	0.3056	0.5368	0.32	0.84	0.38	0.31	0.426	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.439655	NA	NA	0.306305	0.301092	NA	0.297	NA	4.6172616
1190	2	233322424	233322424	T	C	intronic	ALPI	NA	NA	NA	intronic	ENSG00000163295	NA	NA	NA	NA	NA	2q37.1	NA	Name=ERalpha_a	NA	NA	rs2246004	0.16	0.16	0.131	0.161941	0.1312	0.2411	0.0865	0.1808	0.1401	0.13	0.24	0.09	0.15	0.1371	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.947989	NA	NA	0.114535	0.157739	NA	0.13	NA	4.617165
1190	11	72316148	72316148	C	G	intronic	PDE2A	NA	NA	NA	intronic	ENSG00000186642	NA	NA	NA	NA	NA	11q13.4	Score=785;Name=V$PPARG_01	NA	NA	NA	rs78279319	0.07	0.07	0.047	0.0473243	0.1451	NA	0.1052	0.0076	0.0082	0.13	NA	0.11	0.01	0.0955	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.140553	NA	NA	0.142441	0.027273	NA	0.094	NA	4.616959
1190	10	5197881	5197881	A	G	ncRNA_exonic	AKR1CL1	NA	NA	NA	exonic	ENSG00000196326	NA	synonymous SNV	ENSG00000196326:ENST00000473890:exon4:c.T402C:p.D134D	NA	NA	10p15.1	NA	NA	NA	NA	rs1781931	0.22	0.22	0.207	0.202276	0.2614	0.2222	0.1974	0.1415	0.2065	0.26	0.21	0.21	0.17	0.2884	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.344713	NA	NA	NA	NA	NA	0.21	NA	4.6168666
1190	1	247836008	247836008	G	A	exonic	OR13G1	NA	synonymous SNV	OR13G1:NM_001005487:exon1:c.C336T:p.F112F	exonic	ENSG00000197437	NA	synonymous SNV	ENSG00000197437:ENST00000359688:exon1:c.C336T:p.F112F	NA	NA	1q44	NA	NA	NA	NA	rs28555391	0.31	0.31	0.307	0.329273	0.3519	0.376	0.2392	0.2965	0.3661	0.35	0.32	0.24	0.28	0.3379	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.746655	NA	NA	0.360233	0.297776	NA	0.377	NA	4.6166336
1190	2	139659274	139659274	C	T	intergenic	YY1P2,LRP1B	dist=2530;dist=1329722	NA	NA	ncRNA_exonic	ENSG00000232992	NA	NA	NA	Score=800;Name=lod=2387	NA	2q22.1	NA	NA	NA	NA	rs12470151	0.29	0.29	0.286	0.281749	0.3837	0.2421	0.2752	0.233	0.2883	0.37	0.25	0.29	0.2	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.350071	NA	NA	NA	NA	NA	0.348	NA	4.6163
1190	2	188690750	188690750	T	A	intergenic	TFPI,GULP1	dist=271531;dist=465646	NA	NA	ncRNA_exonic	ENSG00000235616	NA	NA	NA	Score=711;Name=lod=1037	NA	2q32.1	NA	NA	NA	NA	rs4316908	0.3	0.3	0.313	0.308906	0.3837	0.1121	0.3098	0.3517	0.3763	0.37	0.11	0.32	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.359379	NA	NA	NA	NA	NA	0.384	NA	4.6163
1190	6	81266456	81266456	G	A	intergenic	BCKDHB,FAM46A	dist=210469;dist=1188991	NA	NA	ncRNA_exonic	ENSG00000216352	NA	NA	NA	Score=834;Name=lod=3270	NA	6q14.1	NA	NA	NA	NA	rs953499	0.51	0.51	0.527	0.576078	0.3837	0.5248	0.549	0.7474	0.6145	0.37	0.52	0.5	0.72	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.239153	NA	NA	NA	NA	NA	0.522	NA	4.6163
1190	6	81266744	81266744	A	G	intergenic	BCKDHB,FAM46A	dist=210757;dist=1188703	NA	NA	ncRNA_exonic	ENSG00000216352	NA	NA	NA	Score=834;Name=lod=3270	NA	6q14.1	NA	NA	NA	NA	rs2322842	0.53	0.53	0.523	0.605431	0.3837	0.5308	0.5533	0.851	0.6155	0.37	0.52	0.5	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.019598	NA	NA	NA	NA	NA	0.536	NA	4.6163
1190	6	29976607	29976607	G	A	ncRNA_intronic	HLA-J,ZNRD1-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000204622,ENSG00000204623	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs9261112	0.05	0.05	0.048	0.0413339	0.0507	0.0357	0.0403	0.0499	0.0266	0.05	0.04	0.04	0.05	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.082914	NA	NA	NA	NA	NA	0.029	NA	4.6159666
1190	17	61607708	61607708	T	C	exonic	KCNH6	NA	synonymous SNV	KCNH6:NM_030779:exon4:c.T480C:p.H160H,KCNH6:NM_173092:exon4:c.T480C:p.H160H	exonic	ENSG00000173826	NA	synonymous SNV	ENSG00000173826:ENST00000314672:exon4:c.T480C:p.H160H,ENSG00000173826:ENST00000456941:exon4:c.T480C:p.H160H,ENSG00000173826:ENST00000580652:exon4:c.T480C:p.H160H,ENSG00000173826:ENST00000581784:exon4:c.T480C:p.H160H,ENSG00000173826:ENST00000583023:exon4:c.T480C:p.H160H	NA	NA	17q23.3	NA	NA	NA	NA	rs7221517	0.31	0.31	0.299	0.28734	0.3797	0.2252	0.3141	0.27	0.2607	0.38	0.22	0.33	0.27	0.3173	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.53578	NA	NA	0.353953	0.30345	NA	0.333	NA	4.6157136
1190	7	97944744	97944744	G	A	intronic	BAIAP2L1	NA	NA	NA	intronic	ENSG00000006453	NA	NA	NA	NA	NA	7q21.3	NA	Name=TAL1_(SC-12984),PAX5-C20,PAX5-N19,TCF12,POU2F2,MEF2A,BCL11A,MEF2C_(SC-13268),PU.1,Oct-2	Name=16	NA	rs2107716	0.35	0.35	0.332	0.291534	0.4751	0.2629	0.3501	0.2413	0.1585	0.47	0.24	0.37	0.28	0.4072	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.088095	NA	NA	0.502093	0.281207	NA	0.268	NA	4.615607
1190	3	16242101	16242101	C	T	intronic	GALNT15	NA	NA	NA	intronic	ENSG00000131386	NA	NA	NA	NA	NA	3p25.1	NA	NA	Name=48	NA	rs3796301	0.16	0.16	0.146	0.188698	0.1093	0.1885	0.2334	0.1589	0.2791	0.1	0.21	0.23	0.15	0.155	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.325544	NA	NA	0.120116	0.152519	NA	0.196	NA	4.615584
1190	6	74229792	74229792	A	G	intronic	EEF1A1	NA	NA	NA	UTR5	ENSG00000156508	ENST00000316292:c.-43T>C	NA	NA	NA	NA	6q13	NA	Name=Pol2,Pol2-4H8,HEY1,TBP	NA	NA	rs2073465	0.16	0.16	0.141	0.161542	0.1958	0.2252	0.1787	0.0666	0.1769	0.2	0.2	0.15	0.07	0.1867	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.44662	NA	NA	0.16862	0.080415	NA	0.094	NA	4.6155467
1190	5	30365717	30365717	C	T	intergenic	LSP1P3,CDH6	dist=1438297;dist=828045	NA	NA	ncRNA_exonic	ENSG00000250118	NA	NA	NA	Score=539;Name=lod=206	NA	5p13.3	NA	NA	NA	NA	rs13175468	0.19	0.19	0.188	0.176917	0.3847	0.002	0.196	0.1006	0.2331	0.38	NA	0.24	0.1	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.719154	NA	NA	NA	NA	NA	0.225	NA	4.6153
1190	5	56718875	56718875	T	C	intergenic	GPBP1,ACTBL2	dist=158369;dist=56968	NA	NA	ncRNA_exonic	ENSG00000250308	NA	NA	NA	Score=640;Name=lod=532	NA	5q11.2	NA	NA	NA	NA	rs2172771	0.21	0.21	0.175	0.180711	0.3847	0.0357	0.3444	0.0242	0.2157	0.37	0.04	0.37	0.04	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.471698	NA	NA	NA	NA	NA	0.239	NA	4.6153
1190	5	56719995	56719995	G	C	intergenic	GPBP1,ACTBL2	dist=159489;dist=55848	NA	NA	ncRNA_exonic	ENSG00000250308	NA	NA	NA	Score=688;Name=lod=836	NA	5q11.2	NA	NA	NA	NA	rs955661	0.21	0.21	0.174	0.180511	0.3847	0.0357	0.3473	0.0242	0.2127	0.37	0.04	0.38	0.04	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.145188	NA	NA	NA	NA	NA	0.239	NA	4.6153
1190	6	31249127	31249127	G	A	intergenic	HLA-C,HLA-B	dist=9214;dist=72522	NA	NA	ncRNA_exonic	ENSG00000227939	NA	NA	NA	Score=849;Name=lod=3743	NA	6p21.33	NA	NA	NA	NA	rs2253487	0.39	0.39	0.367	0.351238	0.3847	0.4306	0.3573	0.2625	0.3507	0.41	0.43	0.38	0.3	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.537284	NA	NA	NA	NA	NA	0.348	NA	4.6153
1190	12	76509735	76509735	G	A	intergenic	NAP1L1,BBS10	dist=30997;dist=228531	NA	NA	ncRNA_exonic	ENSG00000258304	NA	NA	NA	NA	NA	12q21.2	NA	Name=USF-1	NA	NA	rs146387771	0.37	0.37	0.401	0.46226	0.3847	0.5595	0.4337	0.3404	0.6268	0.33	0.47	0.4	0.3	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.057544	NA	NA	NA	NA	NA	NA	NA	4.6153
1190	12	76509736	76509736	T	C	intergenic	NAP1L1,BBS10	dist=30998;dist=228530	NA	NA	ncRNA_exonic	ENSG00000258304	NA	NA	NA	NA	NA	12q21.2	NA	Name=USF-1	NA	NA	rs139422052	0.37	0.37	0.397	0.46226	0.3847	0.5595	0.4337	0.3404	0.6268	0.33	0.47	0.4	0.3	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.12835	NA	NA	NA	NA	NA	NA	NA	4.6153
1191	19	55222293	55222293	G	A	ncRNA_exonic	LILRP2	NA	NA	NA	ncRNA_intronic	ENSG00000170858,ENSG00000240258	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs74446042	0.07	0.07	0.061	0.0744808	0.0517	0.1389	0.085	0.0234	0.093	0.06	0.13	0.08	0.02	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.547026	NA	NA	NA	NA	NA	0.058	NA	4.6149666
1191	14	22392703	22392703	G	C	intergenic	OR4E2,DAD1	dist=258465;dist=641104	NA	NA	exonic	ENSG00000211792	NA	nonsynonymous SNV	ENSG00000211792:ENST00000390440:exon2:c.G226C:p.E76Q	NA	NA	14q11.2	NA	Name=CTCF	NA	NA	rs8021861	0.48	0.48	0.493	0.465855	0.3956	0.504	0.513	0.5091	0.407	0.41	0.55	0.46	0.51	0.4268	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-3.422697	NA	1	0.396036	0.464002	NA	0.514	NA	4.6148974
1191	5	55455645	55455645	G	C	intronic	ANKRD55	NA	NA	NA	intronic	ENSG00000164512	NA	NA	NA	NA	NA	5q11.2	NA	NA	Name=35	NA	rs13186299	0.07	0.07	0.057	0.0433307	0.1412	NA	0.0692	0.0106	0.0133	0.14	0.0017	0.09	0.01	0.096	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.261302	NA	NA	0.147907	0.033364	NA	0.051	NA	4.614893
1191	19	1367226	1367226	G	A	intronic	MUM1	NA	NA	NA	intronic	ENSG00000160953	NA	NA	NA	Score=346;Name=lod=34	NA	19p13.3	NA	NA	NA	NA	rs11668809	0.09	0.09	0.088	0.103235	0.1243	0.0149	0.0922	0.1445	0.1247	0.13	0.02	0.08	0.1	0.1216	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.942405	1.942405	NA	0.139302	0.150477	NA	0.094	NA	4.614798
1191	2	228122239	228122239	T	C	ncRNA_intronic	LOC654841	NA	NA	NA	ncRNA_intronic	ENSG00000236432	NA	NA	NA	NA	NA	2q36.3	NA	NA	NA	NA	rs56326869	0.01	0.01	0.011	0.00978435	0.0209	0.001	0.013	0.003	0.0143	0.02	NA	0.01	0.0041	NA	0.031	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.282635	NA	NA	0.031113	0.004335	NA	0.014	NA	4.6146536
1191	5	1235939	1235939	A	G	intronic	SLC6A18	NA	NA	NA	intronic	ENSG00000164363	NA	NA	NA	NA	NA	5p15.33	NA	Name=SETDB1,KAP1	NA	NA	rs11956561	0.32	0.32	0.314	0.324481	0.3857	0.2272	0.3703	0.2315	0.455	0.38	0.24	0.37	0.27	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.575984	NA	NA	NA	NA	NA	0.304	NA	4.6143
1191	6	31249229	31249229	T	C	intergenic	HLA-C,HLA-B	dist=9316;dist=72420	NA	NA	ncRNA_exonic	ENSG00000227939	NA	NA	NA	Score=849;Name=lod=3743	NA	6p21.33	NA	NA	NA	NA	rs2853941	0.39	0.39	0.364	0.351438	0.3857	0.4306	0.3588	0.2617	0.3507	0.41	0.43	0.38	0.3	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.608345	NA	NA	NA	NA	NA	0.348	NA	4.6143
1191	5	74034245	74034245	G	A	intronic	GFM2	NA	NA	NA	intronic	ENSG00000164347	NA	NA	NA	Score=563;Name=lod=260	NA	5q13.3	NA	NA	NA	NA	rs7732843	0.14	0.14	0.147	0.139177	0.1382	0.0208	0.1196	0.2829	0.0818	0.11	0.02	0.14	0.31	0.1239	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.894551	NA	NA	0.124186	0.266228	NA	0.203	NA	4.613714
1191	3	174095478	174095478	T	C	intergenic	NLGN1,NAALADL2	dist=94362;dist=481633	NA	NA	ncRNA_exonic	ENSG00000213169	NA	NA	NA	Score=712;Name=lod=1045	NA	3q26.31	NA	NA	NA	NA	rs2090714	0.34	0.34	0.299	0.35024	0.3867	0.2381	0.3703	0.3608	0.3998	0.39	0.22	0.37	0.38	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.918569	NA	NA	NA	NA	NA	0.399	NA	4.6133
1191	7	66459145	66459145	A	C	intronic	SBDS	NA	NA	NA	intronic	ENSG00000126524	NA	NA	NA	NA	NA	7q11.21	NA	NA	Name=8	NA	rs11763269	0.24	0.24	0.175	0.26278	0.3867	0.1369	0.4553	0.0741	0.3834	0.34	0.15	0.41	0.08	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.149233	NA	NA	NA	NA	NA	0.174	NA	4.6133
1191	16	56701827	56701827	T	C	intronic	MT1G	NA	NA	NA	intronic	ENSG00000125144	NA	NA	NA	NA	NA	16q13	NA	Name=TBP,Pol2	NA	NA	rs12448654	0.09	0.09	NA	0.0824681	0.1322	0.0903	0.1225	0.0174	0.0828	0.14	0.08	0.11	0.02	0.1229	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.066926	NA	NA	0.131744	0.038899	NA	0.08	NA	4.613156
1191	3	54914996	54914996	A	G	ncRNA_intronic	CACNA2D3-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000243715	NA	NA	NA	NA	NA	3p14.3	NA	NA	NA	NA	rs9866865	0.09	0.09	0.092	0.120607	0.0537	0.0685	0.0461	0.2148	0.1687	0.05	0.06	0.06	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.207229	NA	NA	NA	NA	NA	0.188	NA	4.6129666
1191	4	39459154	39459154	G	A	intronic	RPL9	NA	NA	NA	intronic	ENSG00000163682	NA	NA	NA	NA	NA	4p14	NA	NA	Name=6	NA	rs2608830	0.16	0.16	0.143	0.154553	0.1909	0.1875	0.2219	0.0522	0.1738	0.17	0.18	0.22	0.06	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.776099	NA	NA	0.196399	0.071747	NA	0.138	NA	4.612701
1191	21	46122658	46122658	G	C	intronic	TSPEAR	NA	NA	NA	ncRNA_exonic	ENSG00000236382	NA	NA	NA	Score=378;Name=lod=46	NA	21q22.3	NA	NA	NA	NA	rs9982962	0.7	0.7	0.707	0.723842	0.7207	0.6081	0.6844	0.7958	0.7771	0.72	0.56	0.72	0.8	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.384228	NA	NA	NA	NA	NA	0.319	NA	4.6126333
1191	11	19197365	19197365	G	A	intronic	ZDHHC13	NA	NA	NA	intronic	ENSG00000177054	NA	NA	NA	Score=574;Name=lod=286	NA	11p15.1	NA	NA	NA	NA	rs78603780	0.1	0.1	0.078	0.0992412	0.1571	0.003	0.111	0.1384	0.0777	0.16	0.0017	0.14	0.11	0.1092	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.320792	1.320792	NA	0.121368	0.138119	NA	0.043	NA	4.612332
1191	1	28212272	28212272	G	A	intronic	THEMIS2	NA	NA	NA	intronic	ENSG00000130775	NA	NA	NA	NA	NA	1p35.3	NA	NA	Name=9	NA	rs11247705	0.49	0.49	0.491	0.480032	0.3877	0.497	0.4063	0.6853	0.3323	0.39	0.51	0.42	0.66	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.475721	NA	NA	NA	NA	NA	0.384	NA	4.6123
1191	7	91758111	91758111	A	G	intronic	CYP51A1	NA	NA	NA	intronic	ENSG00000001630	NA	NA	NA	NA	NA	7q21.2	NA	Name=CTCF	NA	NA	rs7784248	0.37	0.37	0.369	0.3752	0.3877	0.1617	0.3588	0.5106	0.411	0.39	0.17	0.38	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.253765	NA	NA	NA	NA	NA	0.413	NA	4.6123
1191	9	130169301	130169301	G	A	intronic	SLC2A8	NA	NA	NA	intronic	ENSG00000136856	NA	NA	NA	NA	NA	9q33.3	NA	Name=CTCF	NA	NA	rs4075850	0.28	0.28	0.298	0.283347	0.3877	0.1567	0.2349	0.2632	0.3681	0.39	0.12	0.26	0.32	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.630657	NA	NA	NA	NA	NA	0.21	NA	4.6123
1191	11	60640480	60640480	C	A	intronic	ZP1	NA	NA	NA	intronic	ENSG00000149506	NA	NA	NA	NA	NA	11q12.2	NA	Name=NRSF	NA	NA	rs2072098	0.32	0.32	0.32	0.300519	0.3877	0.3224	0.3905	0.1104	0.3814	0.39	0.33	0.4	0.14	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.287571	NA	NA	NA	NA	NA	0.304	NA	4.6123
1191	11	60642325	60642325	G	A	intronic	ZP1	NA	NA	NA	intronic	ENSG00000149506	NA	NA	NA	NA	NA	11q12.2	NA	NA	Name=5	NA	rs2074418	0.31	0.31	0.306	0.295527	0.3877	0.3194	0.389	0.0946	0.3814	0.39	0.33	0.4	0.12	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.359589	NA	NA	NA	NA	NA	0.333	NA	4.6123
1191	16	11010150	11010150	G	T	intronic	CIITA	NA	NA	NA	intronic	ENSG00000179583	NA	NA	NA	NA	NA	16p13.13	NA	NA	Name=18	NA	rs6498130	0.35	0.35	0.353	0.36242	0.3877	0.2292	0.2911	0.4841	0.3599	0.4	0.23	0.29	0.48	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.029232	NA	NA	NA	NA	NA	0.384	NA	4.6123
1191	5	131647677	131647677	C	T	ncRNA_exonic	LOC553103	NA	NA	NA	ncRNA_exonic	ENSG00000233006	NA	NA	NA	NA	NA	5q31.1	NA	NA	NA	NA	rs77719114	0.03	0.03	0.017	0.0199681	0.0547	NA	0.0591	0.003	NA	0.04	NA	0.07	0.002	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.712987	NA	NA	NA	NA	NA	0.043	NA	4.6119666
1191	1	159505297	159505297	C	T	exonic	OR10J5	NA	synonymous SNV	OR10J5:NM_001004469:exon1:c.G501A:p.P167P	exonic	ENSG00000184155	NA	synonymous SNV	ENSG00000184155:ENST00000334857:exon1:c.G501A:p.P167P	NA	NA	1q23.2	Score=819;Name=V$IRF7_01	NA	NA	NA	rs4656837	0.57	0.57	0.567	0.552915	0.6948	0.494	0.6614	0.2943	0.7403	0.69	0.52	0.7	0.34	0.6475	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.567111	NA	NA	0.712674	0.37517	ID=COSM146661;OCCURENCE=1(stomach)	0.58	NA	4.6116926
1191	6	56381912	56381912	G	A	ncRNA_intronic	RNU6-71P	NA	NA	NA	intronic	ENSG00000151914	NA	NA	NA	NA	NA	6p12.1	NA	NA	Name=2	NA	rs4715626	0.67	0.67	0.646	0.632987	0.7217	0.6488	0.7133	0.5076	0.638	0.74	0.67	0.69	0.53	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.731227	NA	NA	NA	NA	NA	0.703	NA	4.6116333
1191	2	3597974	3597974	T	C	exonic	RNASEH1	NA	synonymous SNV	RNASEH1:NM_002936:exon4:c.A498G:p.P166P	exonic	ENSG00000171865	NA	synonymous SNV	ENSG00000171865:ENST00000315212:exon4:c.A498G:p.P166P	NA	NA	2p25.3	NA	NA	NA	NA	rs10186193	0.37	0.37	0.379	0.375599	0.3479	0.2371	0.2305	0.6233	0.3149	0.35	0.24	0.24	0.65	0.341	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.325249	NA	NA	0.366279	0.59714	NA	0.601	NA	4.6114876
1191	19	46974306	46974306	A	C	UTR5	PNMAL1	NM_018215:c.-14T>G,NM_001103149:c.-14T>G	NA	NA	UTR5	ENSG00000182013	ENST00000438932:c.-14T>G,ENST00000313683:c.-14T>G,ENST00000602246:c.-14T>G	NA	NA	NA	NA	19q13.32	NA	Name=ZNF263,CTCF	NA	NA	rs12978825	0.23	0.23	0.224	0.22484	0.2485	0.1796	0.2032	0.2912	0.1728	0.25	0.15	0.26	0.29	0.2293	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.689687	NA	NA	0.244186	0.320245	NA	0.29	NA	4.6113474
1191	2	38513390	38513390	C	G	intergenic	CYP1B1-AS1,ATL2	dist=104397;dist=8639	NA	NA	ncRNA_exonic	ENSG00000213594	NA	NA	NA	Score=730;Name=lod=1240	NA	2p22.2	NA	NA	NA	NA	rs2373374	0.29	0.29	0.286	0.307109	0.3887	0.1329	0.3329	0.3177	0.3701	0.39	0.15	0.33	0.27	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.378627	NA	NA	NA	NA	NA	0.377	NA	4.6113
1191	5	118883215	118883215	A	G	intergenic	HSD17B4,FAM170A	dist=5185;dist=82039	NA	NA	ncRNA_exonic	ENSG00000213663	NA	NA	NA	Score=719;Name=lod=1118	NA	5q23.1	NA	NA	NA	NA	rs442919	0.25	0.25	0.238	0.253794	0.3887	0.0833	0.2896	0.1679	0.3814	0.38	0.09	0.32	0.2	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.184651	NA	NA	NA	NA	NA	0.355	NA	4.6113
1191	6	4189964	4189964	T	C	intergenic	ECI2,CDYL	dist=54133;dist=586716	NA	NA	ncRNA_exonic	ENSG00000216307	NA	NA	NA	Score=667;Name=lod=687	NA	6p25.2	NA	NA	NA	NA	rs12212264	0.36	0.36	0.334	0.332069	0.3887	0.4841	0.3372	0.1793	0.32	0.38	0.5	0.34	0.18	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.855215	NA	NA	NA	NA	NA	0.297	NA	4.6113
1191	7	16890228	16890228	C	T	intergenic	AGR2,AGR3	dist=45490;dist=8802	NA	NA	ncRNA_exonic	ENSG00000270593	NA	NA	NA	NA	NA	7p21.1	NA	NA	Name=7	NA	rs11765170	0.45	0.45	0.442	0.485224	0.3887	0.4216	0.3573	0.6346	0.5389	0.37	0.44	0.37	0.64	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.413743	NA	NA	NA	NA	NA	0.471	NA	4.6113
1191	11	3439479	3439479	G	A	intergenic	LOC650368,TRPC2	dist=9101;dist=208211	NA	NA	ncRNA_exonic	ENSG00000166492	NA	NA	NA	Score=340;Name=lod=32	NA	11p15.4	NA	NA	NA	NA	rs10834001	0.39	0.39	0.391	0.376198	0.3887	0.4117	0.4337	0.3056	0.3814	0.4	0.41	0.41	0.35	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.221384	NA	NA	NA	NA	NA	0.058	NA	4.6113
1191	13	111562803	111562803	T	C	intronic	ANKRD10	NA	NA	NA	intronic	ENSG00000088448	NA	NA	NA	NA	NA	13q34	NA	NA	Name=18	NA	rs35930208	0.28	0.28	0.254	0.301917	0.3887	0.1706	0.3242	0.2103	0.456	0.38	0.17	0.34	0.18	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.221593	NA	NA	NA	NA	NA	0.333	NA	4.6113
1191	19	39964247	39964247	G	A	intronic	SUPT5H	NA	NA	NA	intronic	ENSG00000196235	NA	NA	NA	NA	NA	19q13.2	NA	NA	Name=3	NA	rs4803244	0.46	0.46	0.464	0.495208	0.3887	0.4613	0.4006	0.621	0.5368	0.39	0.42	0.43	0.63	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.942957	NA	NA	NA	NA	NA	0.42	NA	4.6113
1191	10	54076271	54076271	A	G	intronic	DKK1	NA	NA	NA	intronic	ENSG00000107984	NA	NA	NA	NA	NA	10q21.1	NA	Name=Pol2	Name=65	NA	rs1569198	0.36	0.36	0.348	0.317891	0.493	0.1687	0.3905	0.2776	0.2945	0.49	0.2	0.44	0.29	0.4128	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.782723	NA	NA	0.483023	0.312982	NA	0.377	NA	4.611177
1191	2	29455267	29455267	A	G	exonic	ALK	NA	synonymous SNV	ALK:NM_004304:exon15:c.T2535C:p.G845G	exonic	ENSG00000171094	NA	synonymous SNV	ENSG00000171094:ENST00000389048:exon15:c.T2535C:p.G845G	Score=415;Name=lod=65	NA	2p23.2	NA	NA	NA	NA	rs2256740	0.51	0.51	0.511	0.5	0.7247	0.1746	0.5476	0.534	0.5245	0.69	0.19	0.57	0.54	0.6121	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.09772	NA	NA	0.718837	0.549251	ID=COSM148825;OCCURENCE=1(stomach)	0.63	NA	4.6110296
1191	5	66085585	66085585	A	G	intronic	MAST4	NA	NA	NA	intronic	ENSG00000069020	NA	NA	NA	NA	NA	5q12.3	NA	NA	Name=3	NA	rs35948700	0.07	0.07	0.059	0.0557109	0.1471	0.004	0.1239	0.0053	0.0348	0.14	NA	0.12	0.01	0.1114	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.074345	NA	NA	0.130839	0.026826	NA	0.094	NA	4.610661
1191	19	14846897	14846897	T	A	UTR3	EMR2	NM_013447:c.*151A>T,NM_001271052:c.*151A>T	NA	NA	UTR3	ENSG00000127507	ENST00000353005:c.*151A>T,ENST00000353876:c.*151A>T,ENST00000346057:c.*151A>T,ENST00000392967:c.*151A>T,ENST00000315576:c.*151A>T,ENST00000596991:c.*151A>T	NA	NA	NA	NA	19p13.12	NA	Name=MafF_(M8194),MafK_(SC-477),MafK_(ab50322)	NA	NA	rs1859257	0.77	0.77	0.778	0.81849	0.7227	0.8284	0.6614	0.9319	0.865	0.73	0.77	0.65	0.92	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.18803	NA	NA	NA	NA	NA	0.754	NA	4.6106334
1191	11	119206375	119206375	G	A	exonic	RNF26	NA	synonymous SNV	RNF26:NM_032015:exon1:c.G543A:p.T181T	exonic	ENSG00000173456	NA	synonymous SNV	ENSG00000173456:ENST00000311413:exon1:c.G543A:p.T181T	NA	NA	11q23.3	NA	Name=TAF1	NA	NA	rs2511841	0.68	0.68	0.658	0.725639	0.659	0.6607	0.7349	0.7421	0.8323	0.65	0.67	0.71	0.71	0.7202	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.172999	NA	NA	0.67695	0.71055	NA	0.645	NA	4.6105166
1191	10	126681219	126681219	G	C	intronic	CTBP2	NA	NA	NA	intronic	ENSG00000175029	NA	NA	NA	NA	NA	10q26.13	NA	Name=Rad21,CTCF,SMC3_(ab9263),CTCF_(C-20),CTCF_(SC-5916)	Name=129	NA	rs3213907	0.53	0.53	NA	0.548922	0.7247	0.7411	0.4467	0.1823	0.7382	0.67	0.67	0.48	0.2	0.6648	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.102412	NA	NA	NA	NA	NA	0.529	NA	4.6105
1191	7	16890225	16890225	C	G	intergenic	AGR2,AGR3	dist=45487;dist=8805	NA	NA	ncRNA_exonic	ENSG00000270593	NA	NA	NA	NA	NA	7p21.1	NA	NA	Name=7	NA	rs11765147	0.45	0.45	0.444	0.485423	0.3897	0.4216	0.3573	0.6346	0.5389	0.37	0.44	0.37	0.64	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.029095	NA	NA	NA	NA	NA	0.471	NA	4.6103
1191	11	3435129	3435129	A	G	intergenic	LOC650368,TRPC2	dist=4751;dist=212561	NA	NA	ncRNA_exonic	ENSG00000166492	NA	NA	NA	Score=278;Name=lod=18	NA	11p15.4	NA	NA	NA	NA	rs2898904	0.25	0.25	0.214	0.316693	0.3897	0.4028	0.3343	0.1014	0.4315	0.31	0.3	0.26	0.12	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.479259	NA	NA	NA	NA	NA	NA	NA	4.6103
1191	12	75057687	75057687	G	A	intergenic	ATXN7L3B,KCNC2	dist=122455;dist=376171	NA	NA	ncRNA_exonic	ENSG00000188646	NA	NA	NA	Score=627;Name=lod=471	NA	12q21.1	NA	NA	NA	NA	rs7311420	0.5	0.5	0.495	0.526158	0.3897	0.3651	0.4352	0.8351	0.4796	0.41	0.39	0.43	0.83	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.205291	NA	NA	NA	NA	NA	0.478	NA	4.6103
1191	17	994812	994812	G	A	intronic	ABR	NA	NA	NA	intronic	ENSG00000159842	NA	NA	NA	NA	NA	17p13.3	NA	Name=ZNF263	NA	NA	rs2257526	0.39	0.39	0.408	0.399361	0.3897	0.4712	0.2421	0.3722	0.4836	0.4	0.47	0.23	0.4	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.581652	NA	NA	NA	NA	NA	0.319	NA	4.6103
1191	21	43710052	43710052	C	T	intronic	ABCG1	NA	NA	NA	intronic	ENSG00000160179	NA	NA	NA	NA	NA	21q22.3	Score=925;Name=V$MEIS1_01	NA	NA	NA	rs4148137	0.34	0.34	0.323	0.326278	0.3897	0.3363	0.3703	0.2315	0.3476	0.38	0.35	0.43	0.2	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.241305	NA	NA	NA	NA	NA	0.384	NA	4.6103
1191	15	79185877	79185877	A	G	intronic	MORF4L1	NA	NA	NA	intronic	ENSG00000185787	NA	NA	NA	NA	NA	15q25.1	NA	NA	Name=6	NA	rs1836556	0.16	0.16	0.143	0.140775	0.1262	0.254	0.1326	0.1157	0.0787	0.13	0.26	0.12	0.11	0.1364	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.33923	NA	NA	0.127129	0.110883	NA	0.13	NA	4.610271
1191	11	2432964	2432964	T	C	exonic	TRPM5	NA	synonymous SNV	TRPM5:NM_014555:exon17:c.A2508G:p.T836T	exonic	ENSG00000070985	NA	synonymous SNV	ENSG00000070985:ENST00000155858:exon17:c.A2508G:p.T836T,ENSG00000070985:ENST00000452833:exon17:c.A2514G:p.T838T,ENSG00000070985:ENST00000528453:exon17:c.A2508G:p.T836T,ENSG00000070985:ENST00000533060:exon17:c.A2508G:p.T836T,ENSG00000070985:ENST00000533881:exon17:c.A2490G:p.T830T	NA	NA	11p15.5	NA	NA	NA	NA	rs2074234	0.35	0.35	0.308	0.33107	0.3509	0.4643	0.366	0.2027	0.3221	0.33	0.48	0.36	0.21	0.355	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.072987	NA	NA	0.350547	0.240917	NA	0.341	NA	4.6102196
1191	13	52603775	52603775	C	T	exonic	UTP14C	NA	synonymous SNV	UTP14C:NM_021645:exon2:c.C835T:p.L279L	exonic	ENSG00000253797	NA	synonymous SNV	ENSG00000253797:ENST00000521776:exon2:c.C835T:p.L279L	Score=609;Name=lod=397	NA	13q14.3	NA	NA	NA	NA	rs3742291	0.56	0.56	0.53	0.510583	0.7227	0.5952	0.6412	0.2005	0.5317	0.71	0.58	0.67	0.21	0.6288	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.913871	NA	NA	0.705233	0.289605	NA	0.529	NA	4.6099336
1191	8	99057150	99057150	C	A	intronic	RPL30	NA	NA	NA	UTR3	ENSG00000156482	ENST00000518850:c.*17G>T	NA	NA	NA	NA	8q22.2	NA	Name=Pol2-4H8,CTCF_(SC-5916),c-Myc,Pol2	Name=9	NA	rs11777189	0.3	0.3	0.295	0.250799	0.5586	0.0794	0.3242	0.1278	0.2249	0.56	0.06	0.38	0.12	0.419	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.199103	NA	NA	0.579302	0.205175	NA	0.319	NA	4.6097647
1191	1	11293147	11293147	C	T	intronic	MTOR	NA	NA	NA	ncRNA_exonic	ENSG00000238173	NA	NA	NA	Score=603;Name=lod=375	NA	1p36.22	NA	NA	NA	NA	rs11121702	0.7	0.7	0.666	0.694489	0.7237	0.9187	0.8112	0.3116	0.8681	0.73	0.91	0.8	0.32	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.240642	NA	NA	NA	NA	NA	0.688	NA	4.6096333
1191	4	2993980	2993980	T	C	exonic	GRK4	NA	synonymous SNV	GRK4:NM_001004056:exon3:c.T204C:p.D68D,GRK4:NM_001004057:exon4:c.T300C:p.D100D,GRK4:NM_182982:exon4:c.T300C:p.D100D	exonic	ENSG00000125388	NA	synonymous SNV	ENSG00000125388:ENST00000345167:exon3:c.T204C:p.D68D,ENSG00000125388:ENST00000398051:exon3:c.T204C:p.D68D,ENSG00000125388:ENST00000398052:exon4:c.T300C:p.D100D,ENSG00000125388:ENST00000504933:exon4:c.T300C:p.D100D	NA	NA	4p16.3	NA	NA	NA	NA	rs2515941	0.32	0.32	0.302	0.292532	0.3767	0.0942	0.3256	0.4644	0.1544	0.38	0.1	0.34	0.45	0.3212	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.006909	NA	NA	0.359302	0.432365	NA	0.225	NA	4.6094646
1191	3	110401766	110401766	G	A	intergenic	FLJ25363,PVRL3-AS1	dist=1187752;dist=362397	NA	NA	ncRNA_exonic	ENSG00000244722	NA	NA	NA	Score=805;Name=lod=2493	NA	3q13.13	NA	NA	NA	NA	rs4510407	0.19	0.19	0.17	0.157947	0.3907	0.0188	0.1974	0.0333	0.2025	0.39	0.02	0.23	0.05	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.406067	1.406067	NA	NA	NA	NA	0.188	NA	4.6093
1191	19	45835983	45835983	A	G	intergenic	CKM,KLC3	dist=9748;dist=8015	NA	NA	ncRNA_exonic	ENSG00000242675	NA	NA	NA	Score=713;Name=lod=1058	NA	19q13.32	NA	NA	NA	NA	rs12972151	0.22	0.22	0.196	0.225839	0.3907	0.0754	0.1945	0.115	0.3834	0.39	0.08	0.23	0.12	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.005669	NA	NA	NA	NA	NA	0.304	NA	4.6093
1191	19	56832040	56832040	G	A	intergenic	ZSCAN5A,ZNF542	dist=92381;dist=47428	NA	NA	ncRNA_exonic	ENSG00000266907	NA	NA	NA	Score=766;Name=lod=1730	NA	19q13.43	NA	NA	NA	NA	rs11881864	0.39	0.39	0.403	0.367612	0.3907	0.4335	0.4236	0.3245	0.2945	0.36	0.45	0.44	0.31	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.076795	NA	NA	NA	NA	NA	0.384	NA	4.6093
1191	20	31629911	31629911	G	A	intronic	BPIFB6	NA	NA	NA	intronic	ENSG00000167104	NA	NA	NA	NA	NA	20q11.21	Score=734;Name=V$SRF_01	NA	NA	NA	rs2070319	0.48	0.48	0.458	0.501997	0.3907	0.7232	0.4625	0.4024	0.5511	0.39	0.71	0.44	0.4	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.802699	NA	NA	NA	NA	NA	0.449	NA	4.6093
1191	1	34071525	34071525	C	T	exonic	CSMD2	NA	nonsynonymous SNV	CSMD2:NM_052896:exon42:c.G6287A:p.R2096K	exonic	ENSG00000121904	NA	nonsynonymous SNV	ENSG00000121904:ENST00000241312:exon42:c.G6287A:p.R2096K	NA	NA	1p35.1	NA	NA	NA	NA	rs1874045	0.54	0.54	0.47	0.518371	0.5755	0.5516	0.6787	0.323	0.5757	0.58	0.58	0.65	0.34	0.5727	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.735332	NA	0	0.57593	0.395824	ID=COSM1600090;OCCURENCE=1(central_nervous_system)	0.471	NA	4.6092034
1191	20	55033635	55033635	C	T	exonic	CASS4	NA	synonymous SNV	CASS4:NM_001164115:exon5:c.C882T:p.N294N,CASS4:NM_001164114:exon6:c.C2031T:p.N677N,CASS4:NM_020356:exon6:c.C2193T:p.N731N,CASS4:NM_001164116:exon7:c.C2193T:p.N731N	exonic	ENSG00000087589	NA	synonymous SNV	ENSG00000087589:ENST00000434344:exon5:c.C882T:p.N294N,ENSG00000087589:ENST00000371336:exon6:c.C2193T:p.N731N,ENSG00000087589:ENST00000360314:exon7:c.C2193T:p.N731N	NA	NA	20q13.31	NA	NA	NA	NA	rs3746624	0.37	0.37	0.328	0.36861	0.335	0.6786	0.4784	0.0711	0.408	0.32	0.66	0.43	0.08	0.3865	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.447398	NA	NA	0.336047	0.11212	NA	0.21	NA	4.6091196
1191	6	16327615	16327615	A	G	exonic	ATXN1	NA	synonymous SNV	ATXN1:NM_001128164:exon7:c.T927C:p.A309A,ATXN1:NM_000332:exon8:c.T927C:p.A309A	exonic	ENSG00000124788	NA	synonymous SNV	ENSG00000124788:ENST00000436367:exon7:c.T927C:p.A309A,ENSG00000124788:ENST00000244769:exon8:c.T927C:p.A309A	NA	NA	6p22.3	NA	NA	NA	NA	rs179990	0.76	0.76	0.743	0.780152	0.661	0.8552	0.7954	0.798	0.7904	0.65	0.85	0.79	0.82	0.732	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.560498	NA	NA	0.665116	0.789605	NA	0.725	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000116475.2;CLNDSDB=.;CLNDSDBID=.	4.6085506
1191	19	59056752	59056752	G	C	intronic	TRIM28	NA	NA	NA	UTR5	ENSG00000130726	ENST00000597968:c.-102G>C	NA	NA	NA	NA	19q13.43	NA	Name=E2F4	NA	NA	rs2305122	0.16	0.16	0.167	0.164337	0.2157	0.0565	0.1671	0.1884	0.1881	0.2	0.06	0.17	0.22	0.1709	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.171731	NA	NA	0.171744	0.177485	NA	0.217	NA	4.6083227
1191	19	45836204	45836204	G	A	intergenic	CKM,KLC3	dist=9969;dist=7794	NA	NA	ncRNA_exonic	ENSG00000242675	NA	NA	NA	Score=713;Name=lod=1058	NA	19q13.32	NA	NA	NA	NA	rs12973246	0.5	0.5	0.515	0.533946	0.3917	0.3085	0.4452	0.9168	0.4581	0.4	0.33	0.44	0.89	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.130453	NA	NA	NA	NA	NA	0.609	NA	4.6083
1191	3	194063153	194063153	G	A	exonic	CPN2	NA	synonymous SNV	CPN2:NM_001080513:exon2:c.C279T:p.F93F	exonic	ENSG00000178772	NA	synonymous SNV	ENSG00000178772:ENST00000323830:exon2:c.C279T:p.F93F,ENSG00000178772:ENST00000429275:exon2:c.C279T:p.F93F	NA	NA	3q29	NA	NA	NA	NA	rs3732474	0.28	0.28	0.3	0.259585	0.3519	0.376	0.2219	0.1626	0.2025	0.35	0.31	0.22	0.19	0.3244	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.026485	NA	NA	0.382209	0.207444	NA	0.435	NA	4.6081576
1191	16	59788649	59788649	T	A	ncRNA_exonic	LOC644649	NA	NA	NA	ncRNA_exonic	ENSG00000260013	NA	NA	NA	NA	NA	16q21	NA	NA	NA	NA	rs78826389	0.03	0.03	0.028	0.0221645	0.0586	0.002	0.0504	0.0045	0.0092	0.05	NA	0.05	0.002	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.043623	NA	NA	NA	NA	NA	0.08	NA	4.6080666
1191	18	60237388	60237388	A	G	exonic	ZCCHC2	NA	synonymous SNV	ZCCHC2:NM_017742:exon12:c.A1899G:p.S633S	exonic	ENSG00000141664	NA	synonymous SNV	ENSG00000141664:ENST00000586834:exon11:c.A936G:p.S312S,ENSG00000141664:ENST00000269499:exon12:c.A1899G:p.S633S	Score=602;Name=lod=373	NA	18q21.33	NA	NA	NA	NA	rs8096750	0.82	0.82	0.819	0.870407	0.6402	0.997	0.8012	0.9879	0.8671	0.61	1	0.79	0.98	0.7582	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.071837	NA	NA	0.660775	0.925434	NA	0.717	NA	4.6074916
1191	11	3435140	3435140	G	A	intergenic	LOC650368,TRPC2	dist=4762;dist=212550	NA	NA	ncRNA_exonic	ENSG00000166492	NA	NA	NA	Score=278;Name=lod=18	NA	11p15.4	NA	NA	NA	NA	rs4328192	0.26	0.26	0.206	0.298522	0.3926	0.4028	0.3329	0.0424	0.4162	0.33	0.35	0.26	0.05	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.204197	NA	NA	NA	NA	NA	NA	NA	4.6074
1191	11	67765056	67765056	T	C	intronic	UNC93B1	NA	NA	NA	intronic	ENSG00000110057	NA	NA	NA	NA	NA	11q13.2	NA	NA	Name=3	NA	rs308328	0.5	0.5	0.545	0.536342	0.3926	0.4306	0.3285	0.9319	0.4059	0.37	0.41	0.34	0.91	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.509757	NA	NA	NA	NA	NA	0.667	NA	4.6074
1191	19	45395619	45395619	A	G	intronic	TOMM40	NA	NA	NA	intronic	ENSG00000130204	NA	NA	NA	NA	Name=Age-related macular degeneration,Cognitive decline,Longevity,Cardiovascular disease risk factors,AB1-42,Alzheimer's disease biomarkers,Alzheimer's disease,Cholesterol, total,C-reactive protein,Brain imaging,Alzheimer's disease (late onset)	19q13.32	NA	NA	NA	NA	rs2075650	0.13	0.13	0.121	0.119409	0.1312	0.0972	0.1052	0.1309	0.1247	0.13	0.11	0.14	0.17	0.1294	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.810523	NA	NA	0.132093	0.133227	NA	0.109	NA	4.607307
1191	6	31237342	31237342	G	T	intronic	HLA-C	NA	NA	NA	intronic	ENSG00000204525	NA	NA	NA	NA	NA	6p21.33	NA	Name=Pol2-4H8	NA	NA	rs72558163	0.16	0.16	0.107	0.13139	0.1282	0.254	0.1282	0.0825	0.0767	0.14	0.27	0.12	0.08	0.1422	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.534649	NA	NA	0.122326	0.086473	NA	0.13	NA	4.607274
1191	17	79205736	79205736	G	A	exonic	ENTHD2	NA	synonymous SNV	ENTHD2:NM_144679:exon8:c.C612T:p.S204S	exonic	ENSG00000167302	NA	synonymous SNV	ENSG00000167302:ENST00000300714:exon8:c.C612T:p.S204S,ENSG00000167302:ENST00000374769:exon9:c.C360T:p.S120S	NA	NA	17q25.3	NA	NA	NA	NA	rs11655759	0.22	0.22	0.193	0.174121	0.3857	0.0536	0.2493	0.1014	0.1258	0.38	0.06	0.26	0.11	0.2903	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.78657	NA	0.06	0.383488	0.150023	NA	0.275	NA	4.6071786
1191	12	69991733	69991733	A	G	intronic	CCT2	NA	NA	NA	intronic	ENSG00000166226	NA	NA	NA	NA	NA	12q15	NA	NA	Name=2	NA	rs56100203	0.07	0.07	0.069	0.0485224	0.1451	NA	0.0764	0.0045	0.0389	0.15	NA	0.1	0.01	0.1056	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.606371	NA	NA	0.142558	0.027248	NA	0.065	NA	4.606742
1191	19	46974324	46974324	A	G	UTR5	PNMAL1	NM_018215:c.-32T>C,NM_001103149:c.-32T>C	NA	NA	UTR5	ENSG00000182013	ENST00000438932:c.-32T>C,ENST00000313683:c.-32T>C,ENST00000602246:c.-32T>C	NA	NA	NA	NA	19q13.32	NA	Name=CTCF,ZNF263	NA	NA	rs3826853	0.23	0.23	0.214	0.22484	0.2485	0.1796	0.2032	0.2912	0.1728	0.25	0.15	0.26	0.29	0.2334	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.850374	NA	NA	0.244767	0.320618	NA	0.29	NA	4.6066664
1191	22	41471066	41471066	T	C	intergenic	RBX1,MIR1281	dist=102047;dist=17451	NA	NA	ncRNA_exonic	ENSG00000213857	NA	NA	NA	Score=867;Name=lod=4456	NA	22q13.2	NA	NA	NA	NA	rs4822000	0.38	0.38	0.301	0.390575	0.3936	0.2401	0.6023	0.3336	0.4693	0.4	0.26	0.58	0.33	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.28214	2.28214	NA	NA	NA	NA	0.391	NA	4.6064
1191	1	16892419	16892419	A	G	intronic	NBPF1	NA	NA	NA	intronic	ENSG00000219481	NA	NA	NA	NA	NA	1p36.13	NA	NA	Name=76	NA	rs200329107	NA	NA	0.164	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3939	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.386802	NA	NA	NA	NA	NA	NA	NA	4.6061
1191	7	43982341	43982341	G	A	ncRNA_exonic	POLR2J4	NA	NA	NA	ncRNA_exonic	ENSG00000214783	NA	NA	NA	NA	NA	7p13	NA	NA	NA	NA	rs2074728	NA	NA	NA	0.0644968	0.0606	0.0942	0.0735	0.0855	0.0031	NA	NA	NA	NA	NA	0.054	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.397942	NA	NA	NA	NA	NA	0.145	NA	4.6060666
1191	19	1032474	1032474	G	T	intronic	CNN2	NA	NA	NA	intronic	ENSG00000064666	NA	NA	NA	NA	NA	19p13.3	NA	Name=Pol2	NA	NA	rs62131196	0.08	0.08	0.075	0.0710863	0.1451	0.001	0.1023	0.0083	0.1299	0.15	NA	0.14	0.01	0.1105	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.056155	NA	NA	0.138372	0.031094	NA	0.087	NA	4.606028
1191	12	45466344	45466344	C	T	intergenic	RACGAP1P,PLEKHA8P1	dist=7150;dist=100473	NA	NA	ncRNA_exonic	ENSG00000257572	NA	NA	NA	Score=535;Name=lod=199	NA	12q12	NA	NA	NA	NA	rs2643154	0.25	0.25	0.22	0.212859	0.3946	0.0754	0.4481	0.1233	0.1217	0.39	0.05	0.42	0.14	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.869862	1.869862	NA	NA	NA	NA	0.348	NA	4.6054
1191	3	75475589	75475589	G	A	ncRNA_intronic	FAM86DP	NA	NA	NA	ncRNA_intronic	ENSG00000244026	NA	NA	NA	NA	NA	3p12.3	NA	NA	NA	NA	rs137991979	0.03	0.03	0.023	0.0365415	0.0258	0.0506	0.0202	0.0204	0.0665	0.03	0.05	0.04	0.03	0.0355	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.677296	NA	NA	NA	NA	NA	NA	NA	4.6053666
1191	16	56670441	56670441	A	G	ncRNA_intronic	MT1JP	NA	NA	NA	ncRNA_intronic	ENSG00000255986	NA	NA	NA	NA	NA	16q12.2	NA	NA	NA	NA	rs12051120	0.09	0.09	0.081	0.0880591	0.0229	0.1052	0.0432	0.1989	0.0194	0.03	0.09	0.04	0.2	0.0387	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.238118	NA	NA	NA	NA	NA	0.101	NA	4.6050666
1191	7	143701884	143701884	C	T	exonic	OR6B1	NA	synonymous SNV	OR6B1:NM_001005281:exon1:c.C795T:p.A265A	exonic	ENSG00000221813	NA	synonymous SNV	ENSG00000221813:ENST00000408922:exon1:c.C795T:p.A265A	NA	NA	7q35	NA	NA	NA	NA	rs728275	0.43	0.43	0.4	0.387181	0.3201	0.5823	0.5461	0.3381	0.2086	0.31	0.59	0.53	0.36	0.3828	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.175145	NA	NA	0.358743	0.325166	NA	0.493	NA	4.6050236
1192	9	32459450	32459450	T	G	exonic	DDX58	NA	synonymous SNV	DDX58:NM_014314:exon17:c.A2400C:p.V800V	exonic	ENSG00000107201	NA	synonymous SNV	ENSG00000107201:ENST00000379868:exon16:c.A1791C:p.V597V,ENSG00000107201:ENST00000379882:exon16:c.A2265C:p.V755V,ENSG00000107201:ENST00000379883:exon17:c.A2400C:p.V800V,ENSG00000107201:ENST00000542096:exon18:c.A2187C:p.V729V	NA	NA	9p21.1	NA	NA	NA	NA	rs3205166	0.35	0.35	0.329	0.314297	0.3529	0.4524	0.3602	0.202	0.2515	0.35	0.43	0.4	0.2	0.346	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.254057	NA	NA	0.362791	0.239673	NA	0.304	NA	4.6049756
1192	8	23663653	23663653	C	A	intergenic	NKX2-6,STC1	dist=99542;dist=35781	NA	NA	ncRNA_exonic	ENSG00000271118	NA	NA	NA	Score=631;Name=lod=488	NA	8p21.2	NA	NA	NA	NA	rs310295	0.41	0.41	0.359	0.428315	0.3956	0.2996	0.4769	0.4879	0.4796	0.41	0.27	0.46	0.52	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.161045	NA	NA	NA	NA	NA	0.333	NA	4.6044
1192	22	16871440	16871440	A	C	intergenic	OR11H1,CCT8L2	dist=421636;dist=200208	NA	NA	ncRNA_exonic	ENSG00000225293	NA	NA	NA	Score=660;Name=lod=644	NA	22q11.1	NA	NA	NA	NA	rs131540	0.32	0.32	0.273	0.334465	0.3956	0.4782	0.3991	0.1293	0.3548	0.33	0.42	0.38	0.16	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.108456	NA	NA	NA	NA	NA	0.058	NA	4.6044
1192	19	8212263	8212263	G	A	exonic	FBN3	NA	synonymous SNV	FBN3:NM_032447:exon1:c.C102T:p.D34D	exonic	ENSG00000142449	NA	synonymous SNV	ENSG00000142449:ENST00000270509:exon1:c.C102T:p.D34D,ENSG00000142449:ENST00000600128:exon2:c.C102T:p.D34D,ENSG00000142449:ENST00000601739:exon2:c.C102T:p.D34D	NA	NA	19p13.2	NA	NA	NA	NA	rs11878432	0.25	0.25	0.238	0.211262	0.3499	0.2163	0.2075	0.1135	0.1984	0.36	0.22	0.27	0.1	0.3743	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.100027	NA	NA	0.338435	0.165524	NA	0.13	NA	4.6040316
1192	15	25324211	25324211	A	G	ncRNA_exonic	SNORD116-13	NA	NA	NA	ncRNA_exonic	ENSG00000207137	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs17115176	0.03	0.03	0.032	0.0453275	0.0159	0.002	0.0144	0.1241	0.0358	0.02	NA	0.01	0.11	0.0294	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.860321	NA	NA	0.017579	0.126712	NA	0.029	NA	4.6037876
1192	3	13670776	13670776	T	C	exonic	FBLN2	NA	synonymous SNV	FBLN2:NM_001998:exon12:c.T2685C:p.F895F,FBLN2:NM_001004019:exon13:c.T2826C:p.F942F,FBLN2:NM_001165035:exon13:c.T2826C:p.F942F	exonic	ENSG00000163520	NA	synonymous SNV	ENSG00000163520:ENST00000295760:exon12:c.T2685C:p.F895F,ENSG00000163520:ENST00000535798:exon12:c.T2763C:p.F921F,ENSG00000163520:ENST00000404922:exon13:c.T2826C:p.F942F,ENSG00000163520:ENST00000492059:exon13:c.T2826C:p.F942F	Score=455;Name=lod=94	NA	3p25.1	NA	NA	NA	NA	rs4684968	0.8	0.8	0.784	0.800719	0.6759	0.9931	0.8285	0.7602	0.7658	0.67	0.99	0.82	0.77	0.7321	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.15325	NA	NA	0.654926	0.752172	NA	0.768	NA	4.6037406
1192	19	15918380	15918380	C	T	exonic	OR10H1	NA	synonymous SNV	OR10H1:NM_013940:exon1:c.G468A:p.G156G	exonic	ENSG00000186723	NA	synonymous SNV	ENSG00000186723:ENST00000334920:exon1:c.G468A:p.G156G	NA	NA	19p13.12	NA	NA	NA	NA	rs28426969	0.32	0.32	0.241	0.316494	0.3857	0.0635	0.3386	0.5257	0.2076	0.37	0.08	0.4	0.48	0.3295	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.555428	NA	NA	0.347791	0.495688	ID=COSM118207;OCCURENCE=1(ovary)	0.094	NA	4.6036756
1192	5	311478	311478	T	C	exonic	PDCD6	NA	synonymous SNV	PDCD6:NM_001267557:exon3:c.T234C:p.I78I,PDCD6:NM_001267556:exon5:c.T432C:p.I144I,PDCD6:NM_013232:exon5:c.T438C:p.I146I,PDCD6:NM_001267558:exon6:c.T228C:p.I76I	exonic	ENSG00000249915	NA	synonymous SNV	ENSG00000249915:ENST00000507473:exon3:c.T177C:p.I59I,ENSG00000249915:ENST00000264933:exon5:c.T438C:p.I146I,ENSG00000249915:ENST00000507528:exon5:c.T432C:p.I144I	NA	NA	5p15.33	NA	NA	Name=59	NA	rs2244029	0.58	0.58	0.561	0.605631	0.7028	0.2649	0.5634	0.7776	0.6544	0.71	0.27	0.6	0.73	0.6527	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.788785	NA	NA	0.707674	0.775306	ID=COSM1486710,COSM449516;OCCURENCE=1(breast)	0.659	NA	4.6034926
1192	4	109710728	109710728	C	T	intergenic	AGXT2L1,COL25A1	dist=26493;dist=21149	NA	NA	ncRNA_exonic	ENSG00000250185	NA	NA	NA	Score=787;Name=lod=2097	NA	4q25	NA	NA	NA	NA	rs13137797	0.37	0.37	0.359	0.338858	0.3966	0.372	0.2911	0.3744	0.2311	0.38	0.42	0.34	0.32	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.889143	NA	NA	NA	NA	NA	0.391	NA	4.6034
1192	20	44728661	44728661	A	G	intergenic	NCOA5,CD40	dist=10081;dist=18245	NA	NA	ncRNA_exonic	ENSG00000213820	NA	NA	NA	Score=733;Name=lod=1267	NA	20q13.12	NA	NA	NA	NA	rs6131012	0.43	0.43	0.416	0.421925	0.3966	0.5546	0.5043	0.3192	0.3916	0.39	0.58	0.43	0.3	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.13071	NA	NA	NA	NA	NA	0.413	NA	4.6034
1192	11	67262286	67262286	T	A	intronic	PITPNM1	NA	NA	NA	intronic	ENSG00000110697	NA	NA	NA	NA	NA	11q13.2	NA	Name=Egr-1	NA	NA	rs12789119	0.25	0.25	NA	0.28155	0.3956	0.1875	0.4942	0.2027	0.2168	0.33	0.15	0.36	0.17	0.0012	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.308259	NA	NA	NA	NA	NA	0.043	NA	4.6032
1192	14	44975510	44975510	C	T	exonic	FSCB	NA	synonymous SNV	FSCB:NM_032135:exon1:c.G681A:p.P227P	exonic	ENSG00000189139	NA	synonymous SNV	ENSG00000189139:ENST00000340446:exon1:c.G681A:p.P227P	NA	NA	14q21.2	NA	NA	NA	NA	rs3809430	0.33	0.33	0.337	0.324481	0.3479	0.3859	0.33	0.2284	0.363	0.33	0.42	0.31	0.23	0.3437	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.190053	NA	NA	0.372558	0.241716	NA	0.217	NA	4.6025086
1192	17	18872337	18872337	T	C	intronic	SLC5A10	NA	NA	NA	UTR3	ENSG00000188522	ENST00000388995:c.*2335A>G	NA	NA	NA	NA	17p11.2	NA	Name=Pol2	Name=7	NA	rs8415	0.55	0.55	0.528	0.525759	0.5169	0.6052	0.6167	0.5431	0.365	0.5	0.57	0.61	0.56	0.5319	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.165358	NA	NA	0.515465	0.539265	NA	0.536	NA	4.6024017
1192	2	218625787	218625787	A	G	intergenic	DIRC3,TNS1	dist=4471;dist=38725	NA	NA	ncRNA_exonic	ENSG00000231035	NA	NA	NA	Score=629;Name=lod=481	NA	2q35	NA	NA	NA	NA	rs7560625	0.33	0.33	0.307	0.330671	0.3976	0.1518	0.3703	0.3896	0.3384	0.41	0.16	0.39	0.35	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.384774	NA	NA	NA	NA	NA	0.261	NA	4.6024
1192	11	16863087	16863087	A	G	intronic	PLEKHA7	NA	NA	NA	intronic	ENSG00000166689	NA	NA	NA	Score=426;Name=lod=72	NA	11p15.1	NA	NA	NA	NA	rs452745	0.18	0.18	0.182	0.194688	0.1352	0.1617	0.2032	0.3079	0.1309	0.12	0.17	0.19	0.26	0.1433	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.09678	2.09678	NA	0.119702	0.265455	NA	0.232	NA	4.601798
1192	17	74583226	74583226	G	T	intergenic	ST6GALNAC2,ST6GALNAC1	dist=1081;dist=37619	NA	NA	intergenic	ENSG00000070731,ENSG00000267084	dist=1016;dist=8440	NA	NA	NA	NA	17q25.1	NA	Name=USF-1,KAP1,ZNF263,USF1_(SC-8983)	Name=21	NA	rs3809700	0.64	0.64	0.63	0.622404	0.7316	0.7202	0.7608	0.3843	0.6329	0.73	0.69	0.72	0.39	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.687295	NA	NA	NA	NA	NA	0.493	NA	4.6017334
1192	6	29910437	29910437	C	T	intronic	HLA-A	NA	NA	NA	ncRNA_exonic	ENSG00000227766	NA	NA	NA	NA	NA	6p22.1	NA	Name=Pol2,Pol2(phosphoS2),YY1,TAF7_(SQ-8),YY1_(C-20),Pol2-4H8,TAF1,POU2F2,GTF2F1_(RAP-74),HEY1,Oct-2	NA	NA	rs9260124	0.35	0.35	0.228	NA	NA	NA	NA	NA	NA	0.38	0.31	0.32	0.35	0.3782	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.343384	1.343384	NA	0.353514	0.326331	NA	0.246	NA	4.6016193
1192	6	144803547	144803547	G	A	intronic	UTRN	NA	NA	NA	intronic	ENSG00000152818	NA	NA	NA	NA	NA	6q24.2	NA	Name=YY1_(C-20),SMC3_(ab9263),CTCF	NA	NA	rs4310077	0.22	0.22	0.066	0.256989	0.2634	0.0794	0.2032	0.3548	0.3395	0.25	0.07	0.22	0.34	0.0615	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.07726	NA	NA	0.073509	0.108992	NA	0.116	NA	4.601591
1192	6	24976739	24976739	G	C	intergenic	FAM65B,CMAHP	dist=65544;dist=104556	NA	NA	ncRNA_intronic	ENSG00000214975	NA	NA	NA	NA	NA	6p22.3	NA	Name=HEY1,Pol2	NA	NA	rs13190691	0.27	0.27	0.266	0.247005	0.3986	0.2302	0.2421	0.1483	0.2454	0.38	0.25	0.25	0.15	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.836197	NA	NA	NA	NA	NA	0.341	NA	4.6014
1192	8	23663504	23663504	A	G	intergenic	NKX2-6,STC1	dist=99393;dist=35930	NA	NA	ncRNA_exonic	ENSG00000271118	NA	NA	NA	Score=631;Name=lod=488	NA	8p21.2	NA	NA	NA	NA	rs310294	0.42	0.42	0.385	0.446486	0.3986	0.2996	0.4899	0.5477	0.4796	0.42	0.27	0.47	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.786597	1.786597	NA	NA	NA	NA	0.37	NA	4.6014
1192	12	71532099	71532099	G	A	intronic	TSPAN8	NA	NA	NA	intronic	ENSG00000127324	NA	NA	NA	NA	NA	12q21.1	NA	Name=CTCF	NA	NA	rs2270584	0.28	0.28	0.282	0.25	0.3986	0.2847	0.2291	0.1195	0.2526	0.39	0.31	0.26	0.11	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.421225	NA	NA	NA	NA	NA	0.261	NA	4.6014
1192	16	69973127	69973127	A	G	intronic	WWP2	NA	NA	NA	intronic	ENSG00000198373	NA	NA	NA	NA	NA	16q22.1	NA	Name=MafK_(ab50322),MafK_(SC-477)	NA	NA	rs2270843	0.23	0.23	0.19	0.182508	0.3986	0.0883	0.3314	0.0219	0.1687	0.4	0.1	0.35	0.02	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.235861	NA	NA	NA	NA	NA	0.181	NA	4.6014
1192	3	136573440	136573440	A	G	exonic	SLC35G2	NA	synonymous SNV	SLC35G2:NM_001097599:exon2:c.A138G:p.G46G,SLC35G2:NM_001097600:exon2:c.A138G:p.G46G,SLC35G2:NM_025246:exon2:c.A138G:p.G46G	exonic	ENSG00000168917	NA	synonymous SNV	ENSG00000168917:ENST00000393079:exon2:c.A138G:p.G46G,ENSG00000168917:ENST00000446465:exon2:c.A138G:p.G46G	Score=703;Name=lod=955	NA	3q22.3	NA	NA	NA	NA	rs9827648	0.71	0.71	0.679	0.704872	0.6551	0.8502	0.7651	0.5711	0.7444	0.65	0.86	0.75	0.6	0.7135	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.153198	NA	NA	0.697093	0.610354	NA	0.543	NA	4.6009736
1192	15	59499274	59499274	C	A	exonic	LDHAL6B	NA	synonymous SNV	LDHAL6B:NM_033195:exon1:c.C135A:p.T45T	exonic	ENSG00000171989	NA	synonymous SNV	ENSG00000171989:ENST00000307144:exon1:c.C135A:p.T45T	NA	NA	15q22.2	NA	NA	NA	NA	rs3809528	0.46	0.46	0.432	0.500998	0.34	0.6131	0.4409	0.5113	0.5798	0.34	0.63	0.4	0.49	0.4051	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.283303	NA	NA	0.320979	0.468508	NA	0.42	NA	4.6005876
1192	5	135764794	135764794	T	C	intergenic	TRPC7,SPOCK1	dist=63630;dist=546193	NA	NA	ncRNA_exonic	ENSG00000213568	NA	NA	NA	Score=355;Name=lod=37	NA	5q31.1	NA	NA	NA	NA	rs346660	0.55	0.55	0.541	0.55651	0.3996	0.6617	0.6066	0.7209	0.3517	0.4	0.62	0.52	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.358636	NA	NA	NA	NA	NA	0.587	NA	4.6004
1192	12	55197244	55197244	C	T	intergenic	DCD,MUCL1	dist=155095;dist=51055	NA	NA	ncRNA_exonic	ENSG00000270858	NA	NA	NA	Score=776;Name=lod=1898	NA	12q13.2	NA	NA	NA	NA	rs11171086	0.47	0.47	0.398	0.472644	0.3996	0.8413	0.536	0.1203	0.5992	0.4	0.84	0.49	0.12	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.084477	NA	NA	NA	NA	NA	0.304	NA	4.6004
1192	14	82382741	82382741	G	A	intergenic	SEL1L,NONE	dist=382536;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000258501	NA	NA	NA	Score=667;Name=lod=683	NA	14q31.1	NA	NA	NA	NA	rs4904042	0.44	0.44	0.438	0.445487	0.3996	0.3403	0.4625	0.5855	0.3998	0.4	0.36	0.46	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.603533	NA	NA	NA	NA	NA	0.37	NA	4.6004
1192	16	31336719	31336719	G	A	exonic	ITGAM	NA	synonymous SNV	ITGAM:NM_000632:exon20:c.G2499A:p.T833T,ITGAM:NM_001145808:exon20:c.G2502A:p.T834T	exonic	ENSG00000169896	NA	synonymous SNV	ENSG00000169896:ENST00000287497:exon20:c.G2499A:p.T833T,ENSG00000169896:ENST00000544665:exon20:c.G2502A:p.T834T	NA	NA	16p11.2	NA	NA	NA	NA	rs1143682	0.39	0.39	0.367	0.294529	0.3519	0.6558	0.3329	0.0832	0.1217	0.35	0.72	0.37	0.09	0.3404	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.159168	NA	NA	0.374084	0.136493	ID=COSM1128977;OCCURENCE=1(prostate),1(large_intestine)	0.348	NA	4.6002826
1192	22	32334203	32334203	C	T	intronic	C22orf24	NA	NA	NA	exonic	ENSG00000128254	NA	synonymous SNV	ENSG00000128254:ENST00000543051:exon1:c.G51A:p.P17P	NA	NA	22q12.3	NA	NA	NA	NA	rs3788442	0.1	0.1	0.083	0.127396	0.0905	0.1954	0.1225	0.0106	0.2566	0.1	0.17	0.1	0.01	0.1426	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.078404	NA	NA	NA	NA	NA	0.152	NA	4.6002333
1192	19	2116764	2116764	C	T	intronic	AP3D1	NA	NA	NA	intronic	ENSG00000065000	NA	NA	NA	Score=251;Name=lod=14	NA	19p13.3	NA	NA	NA	NA	rs114460651	0.08	0.08	0.074	0.0832668	0.1153	NA	0.0706	0.0961	0.1278	0.11	NA	0.09	0.11	0.1321	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.88629	NA	NA	0.152709	0.094179	NA	0.065	NA	4.599891
1192	12	10163379	10163379	C	T	exonic	CLEC12B	NA	synonymous SNV	CLEC12B:NM_001129998:exon1:c.C21T:p.Y7Y,CLEC12B:NM_205852:exon1:c.C21T:p.Y7Y	exonic	ENSG00000256660	NA	synonymous SNV	ENSG00000256660:ENST00000338896:exon1:c.C21T:p.Y7Y,ENSG00000256660:ENST00000396502:exon1:c.C21T:p.Y7Y,ENSG00000256660:ENST00000539155:exon1:c.C21T:p.Y7Y,ENSG00000256660:ENST00000544853:exon1:c.C21T:p.Y7Y	NA	NA	12p13.2	NA	NA	NA	NA	rs1359083	0.31	0.31	0.303	0.265974	0.3966	0.1468	0.3487	0.261	0.2025	0.4	0.14	0.37	0.31	0.3216	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.056131	NA	NA	0.348721	0.29301	NA	0.341	NA	4.5997456
1192	1	202194441	202194441	G	C	intronic	LGR6	NA	NA	NA	intronic	ENSG00000133067	NA	NA	NA	NA	NA	1q32.1	NA	NA	Name=2	NA	rs3010067	0.45	0.45	0.404	0.467652	0.4006	0.6885	0.4582	0.2201	0.6503	0.41	0.72	0.41	0.21	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.102736	NA	NA	NA	NA	NA	0.442	NA	4.5994
1192	2	236055911	236055911	T	C	intergenic	SH3BP4,AGAP1	dist=91553;dist=346822	NA	NA	ncRNA_exonic	ENSG00000231032	NA	NA	NA	Score=493;Name=lod=135	NA	2q37.2	NA	NA	NA	NA	rs7605399	0.5	0.5	0.503	0.521565	0.4006	0.4524	0.3602	0.7859	0.4744	0.4	0.45	0.39	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.124673	NA	NA	NA	NA	NA	0.543	NA	4.5994
1192	14	90769539	90769539	C	T	intronic	NRDE2	NA	NA	NA	intronic	ENSG00000119720	NA	NA	NA	NA	NA	14q32.11	NA	NA	Name=2	NA	rs2149647	0.35	0.35	0.329	0.323482	0.4006	0.5079	0.3026	0.0802	0.3978	0.41	0.5	0.33	0.09	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.041329	NA	NA	NA	NA	NA	0.304	NA	4.5994
1192	17	52032211	52032211	T	C	intergenic	KIF2B,TOM1L1	dist=129638;dist=945841	NA	NA	ncRNA_exonic	ENSG00000263189	NA	NA	NA	Score=466;Name=lod=104	NA	17q22	NA	NA	NA	NA	rs11650207	0.26	0.26	0.234	0.230032	0.4006	0.245	0.2666	0.0174	0.3006	0.42	0.22	0.29	0.03	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.120554	NA	NA	NA	NA	NA	0.203	NA	4.5994
1192	18	72057126	72057126	T	C	intergenic	C18orf63,FAM69C	dist=30704;dist=45837	NA	NA	ncRNA_exonic	ENSG00000235297	NA	NA	NA	Score=668;Name=lod=692	NA	18q22.3	NA	NA	NA	NA	rs12959382	0.31	0.31	0.301	0.316494	0.4006	0.2708	0.2723	0.2474	0.4018	0.41	0.22	0.29	0.28	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.482851	1.482851	0	NA	NA	NA	0.254	NA	4.5994
1192	6	31504194	31504194	A	G	ncRNA_exonic	SNORD117	NA	NA	NA	ncRNA_exonic	ENSG00000201785	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs114751021	0.01	0.01	0.008	0.00778754	0.0229	NA	0.013	NA	0.0072	0.02	NA	0.01	NA	0.0154	0.029	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.546669	1.546669	NA	0.029131	0.005137	NA	0.007	NA	4.5992356
1192	2	182360182	182360182	T	C	intronic	ITGA4	NA	NA	NA	intronic	ENSG00000115232	NA	NA	NA	NA	NA	2q31.3	Score=792;Name=V$CART1_01	NA	NA	NA	rs2305586	0.13	0.13	0.119	0.140575	0.1252	0.2361	0.1657	0.0083	0.2188	0.13	0.22	0.12	0.02	0.1512	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.32995	NA	NA	0.125	0.027317	NA	0.217	NA	4.5986
1192	19	1399056	1399056	C	T	intronic	GAMT	NA	NA	NA	intronic	ENSG00000130005	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs55776826	0.1	0.1	0.113	0.113219	0.1282	0.0109	0.0922	0.1672	0.1452	0.14	0.01	0.07	0.15	0.1294	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.167662	NA	NA	0.143837	0.170676	NA	0.109	CLINSIG=non-pathogenic;CLNDBN=Deficiency_of_guanidinoacetate_methyltransferase;CLNREVSTAT=single;CLNACC=RCV000020143.2;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet:SNOMED_CT;CLNDSDBID=NBK3794:C0574080:612736:ORPHA382:124239003	4.598563
1192	6	157963550	157963550	T	C	intronic	ZDHHC14	NA	NA	NA	intronic	ENSG00000175048	NA	NA	NA	Score=272;Name=lod=17	NA	6q25.3	NA	NA	NA	NA	rs17165416	0.4	0.4	0.397	0.414137	0.4016	0.3968	0.487	0.4002	0.4121	0.42	0.38	0.44	0.37	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.391803	NA	NA	NA	NA	NA	0.493	NA	4.5984
1192	19	17881171	17881171	G	A	intronic	FCHO1	NA	NA	NA	intronic	ENSG00000130475	NA	NA	NA	NA	NA	19p13.11	NA	Name=PU.1	NA	NA	rs12327667	0.56	0.56	0.557	0.551318	0.4016	0.7292	0.5259	0.5567	0.5327	0.41	0.76	0.52	0.59	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.38882	NA	NA	NA	NA	NA	0.558	NA	4.5984
1192	19	50322637	50322637	C	T	intronic	MED25	NA	NA	NA	intronic	ENSG00000104973	NA	NA	NA	NA	NA	19q13.33	NA	Name=ZBTB7A_(SC-34508)	NA	NA	rs116536938	NA	NA	0.098	0.44389	0.4016	0.4692	0.4438	0.469	0.4274	NA	NA	NA	NA	NA	0.098	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.550278	NA	NA	NA	NA	NA	0.087	NA	4.5984
1192	19	50322643	50322643	A	G	intronic	MED25	NA	NA	NA	intronic	ENSG00000104973	NA	NA	NA	NA	NA	19q13.33	NA	Name=ZBTB7A_(SC-34508)	NA	NA	rs71205607	NA	NA	0.056	0.44389	0.4016	0.4692	0.4438	0.469	0.4274	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.360136	NA	NA	NA	NA	NA	NA	NA	4.5984
1192	19	10464687	10464687	A	G	intronic	TYK2	NA	NA	NA	UTR5	ENSG00000105397	ENST00000529739:c.-388T>C	NA	NA	NA	NA	19p13.2	NA	Name=NF-YB,Pol2,SP1,IRF1,Egr-1	Name=47	NA	rs280497	0.57	0.57	0.52	0.578275	0.5179	0.6419	0.428	0.6596	0.5716	0.51	0.6	0.48	0.7	0.5333	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.24099	NA	NA	0.517209	0.621308	NA	0.42	NA	4.5982577
1192	16	31283164	31283164	G	A	intronic	ITGAM	NA	NA	NA	intronic	ENSG00000169896	NA	NA	NA	Score=439;Name=lod=81	NA	16p11.2	NA	NA	NA	NA	rs35314490	0.12	0.12	0.116	0.159145	0.1402	0.0149	0.1095	0.2526	0.2362	0.14	0.0017	0.11	0.24	0.1364	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.126557	NA	NA	0.125273	0.211408	NA	0.123	NA	4.598127
1192	22	50502636	50502636	G	A	intronic	MLC1	NA	NA	NA	intronic	ENSG00000100427	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs11568185	0.11	0.11	0.092	0.131589	0.1322	0.0923	0.1758	0.059	0.2382	0.12	0.1	0.16	0.09	0.1386	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.403037	NA	NA	0.131174	0.070487	NA	0.065	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117627.2;CLNDSDB=.;CLNDSDBID=.	4.598026
1192	17	4622638	4622638	C	T	exonic	ARRB2	NA	synonymous SNV	ARRB2:NM_001257331:exon10:c.C795T:p.S265S,ARRB2:NM_199004:exon10:c.C795T:p.S265S,ARRB2:NM_001257328:exon11:c.C903T:p.S301S,ARRB2:NM_001257330:exon11:c.C840T:p.S280S,ARRB2:NM_004313:exon11:c.C840T:p.S280S	exonic	ENSG00000141480	NA	synonymous SNV	ENSG00000141480:ENST00000571206:exon9:c.C264T:p.S88S,ENSG00000141480:ENST00000571428:exon9:c.C264T:p.S88S,ENSG00000141480:ENST00000572457:exon9:c.C264T:p.S88S,ENSG00000141480:ENST00000346341:exon10:c.C795T:p.S265S,ENSG00000141480:ENST00000381488:exon10:c.C795T:p.S265S,ENSG00000141480:ENST00000574954:exon10:c.C264T:p.S88S,ENSG00000141480:ENST00000269260:exon11:c.C840T:p.S280S,ENSG00000141480:ENST00000412477:exon11:c.C903T:p.S301S	Score=475;Name=lod=114	NA	17p13.2	NA	NA	NA	NA	rs1045280	0.67	0.67	0.67	0.669529	0.6879	0.8254	0.7205	0.4047	0.8119	0.71	0.84	0.72	0.38	0.7048	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.912118	NA	NA	0.676163	0.449841	NA	0.594	NA	4.5978036
1192	12	95494769	95494769	C	T	intronic	FGD6	NA	NA	NA	ncRNA_exonic	ENSG00000257121	NA	NA	NA	Score=567;Name=lod=269	NA	12q22	NA	NA	NA	NA	rs7135574	0.71	0.71	0.682	0.727636	0.7356	0.6657	0.7046	0.7625	0.7526	0.74	0.66	0.66	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.999095	NA	NA	NA	NA	NA	0.725	NA	4.5977333
1192	21	46097922	46097922	A	G	intronic	TSPEAR	NA	NA	NA	ncRNA_exonic	ENSG00000229880	NA	NA	NA	Score=317;Name=lod=26	NA	21q22.3	NA	NA	NA	NA	rs2838629	0.69	0.69	0.679	0.70647	0.7356	0.5883	0.6931	0.7738	0.7168	0.73	0.56	0.73	0.77	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.575418	NA	NA	NA	NA	NA	0.674	NA	4.5977333
1192	5	112851088	112851088	T	A	intronic	YTHDC2	NA	NA	NA	intronic	ENSG00000047188	NA	NA	NA	NA	NA	5q22.2	NA	NA	Name=6	NA	rs11241213	0.11	0.11	0.04	0.0942492	0.174	0.0804	0.0893	0.0287	0.1186	0.18	0.07	0.11	0.03	0.1364	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.847016	NA	NA	0.092136	0.024761	NA	0.029	NA	4.597464
1192	4	76542274	76542274	G	C	intronic	CDKL2	NA	NA	NA	intronic	ENSG00000138769	NA	NA	NA	Score=448;Name=lod=88	NA	4q21.1	NA	NA	NA	NA	rs6531780	0.33	0.33	0.344	0.3127	0.4026	0.0694	0.2867	0.5893	0.1155	0.39	0.07	0.31	0.57	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.759553	NA	NA	NA	NA	NA	0.428	NA	4.5974
1192	6	109107340	109107340	T	C	intergenic	LINC00222,ARMC2	dist=16195;dist=62279	NA	NA	ncRNA_exonic	ENSG00000219565	NA	NA	NA	Score=522;Name=lod=177	NA	6q21	NA	NA	NA	NA	rs3751127	0.33	0.33	0.294	0.339257	0.4026	0.2837	0.3948	0.2504	0.4121	0.41	0.28	0.43	0.21	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.66848	1.66848	NA	NA	NA	NA	0.42	NA	4.5974
1192	10	19229606	19229606	C	T	intergenic	ARL5B,PLXDC2	dist=262666;dist=875766	NA	NA	ncRNA_exonic	ENSG00000234813	NA	NA	NA	Score=617;Name=lod=431	NA	10p12.31	NA	NA	NA	NA	rs7907800	0.42	0.42	0.459	0.464457	0.4026	0.3462	0.4049	0.5908	0.5215	0.4	0.35	0.38	0.57	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.627872	NA	NA	NA	NA	NA	0.319	NA	4.5974
1192	10	19229638	19229638	G	A	intergenic	ARL5B,PLXDC2	dist=262698;dist=875734	NA	NA	ncRNA_exonic	ENSG00000234813	NA	NA	NA	Score=617;Name=lod=431	NA	10p12.31	NA	NA	NA	NA	rs7906865	0.42	0.42	0.45	0.464657	0.4026	0.3462	0.4049	0.5908	0.5225	0.4	0.35	0.38	0.56	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.172601	NA	NA	NA	NA	NA	0.355	NA	4.5974
1192	10	19229645	19229645	C	G	intergenic	ARL5B,PLXDC2	dist=262705;dist=875727	NA	NA	ncRNA_exonic	ENSG00000234813	NA	NA	NA	Score=617;Name=lod=431	NA	10p12.31	NA	NA	NA	NA	rs7907812	0.42	0.42	0.44	0.464657	0.4026	0.3462	0.4049	0.5908	0.5225	0.4	0.35	0.38	0.57	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.27357	NA	NA	NA	NA	NA	0.37	NA	4.5974
1192	2	101584895	101584895	C	T	intronic	NPAS2	NA	NA	NA	intronic	ENSG00000170485	NA	NA	NA	NA	NA	2q11.2	NA	Name=Pol2	NA	NA	rs2289950	0.27	0.27	0.241	0.300719	0.1143	0.4583	0.3487	0.292	0.3078	0.13	0.43	0.28	0.29	0.2005	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.742257	NA	NA	0.087907	0.261916	ID=COSM148915;OCCURENCE=1(stomach)	0.239	NA	4.597293
1192	3	186570746	186570746	T	G	ncRNA_exonic	ADIPOQ-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000226482	NA	NA	NA	NA	NA	3q27.3	NA	NA	NA	NA	rs17846866	0.03	0.03	0.029	0.0443291	0.0696	0.0238	0.0173	0.0045	0.1125	0.07	0.02	0.01	0.01	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.258536	NA	NA	NA	NA	NA	0.029	NA	4.5970666
1192	17	74152366	74152366	A	G	exonic	RNF157	NA	synonymous SNV	RNF157:NM_052916:exon14:c.T1450C:p.L484L	exonic	ENSG00000141576	NA	synonymous SNV	ENSG00000141576:ENST00000269391:exon14:c.T1450C:p.L484L,ENSG00000141576:ENST00000319945:exon14:c.T1450C:p.L484L	NA	NA	17q25.1	NA	NA	NA	NA	rs881502	0.31	0.31	0.29	0.311102	0.3767	0.2163	0.3977	0.2572	0.3528	0.37	0.23	0.39	0.27	0.3328	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.976348	NA	NA	0.360233	0.267817	ID=COSM148345;OCCURENCE=1(stomach)	0.333	NA	4.5969336
1192	1	199356619	199356619	A	C	intergenic	LOC100131234,NR5A2	dist=450061;dist=640111	NA	NA	ncRNA_exonic	ENSG00000236468	NA	NA	NA	Score=854;Name=lod=3942	NA	1q32.1	NA	NA	NA	NA	rs659503	0.38	0.38	0.336	0.399561	0.4036	0.2996	0.5432	0.3949	0.4029	0.38	0.29	0.52	0.36	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.23053	NA	NA	NA	NA	NA	0.493	NA	4.5964
1192	1	199357350	199357350	T	C	intergenic	LOC100131234,NR5A2	dist=450792;dist=639380	NA	NA	ncRNA_exonic	ENSG00000236468	NA	NA	NA	Score=854;Name=lod=3942	NA	1q32.1	NA	NA	NA	NA	rs501451	0.38	0.38	0.358	0.399561	0.4036	0.2996	0.5432	0.3949	0.4029	0.38	0.29	0.52	0.36	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.02664	NA	NA	NA	NA	NA	0.5	NA	4.5964
1192	10	19229675	19229675	C	G	intergenic	ARL5B,PLXDC2	dist=262735;dist=875697	NA	NA	ncRNA_exonic	ENSG00000234813	NA	NA	NA	Score=617;Name=lod=431	NA	10p12.31	NA	NA	NA	NA	rs7910929	0.42	0.42	0.441	0.464657	0.4036	0.3462	0.4049	0.5908	0.5215	0.4	0.35	0.38	0.57	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.291465	NA	NA	NA	NA	NA	0.37	NA	4.5964
1192	1	10555257	10555257	C	T	intronic	PEX14	NA	NA	NA	intronic	ENSG00000142655	NA	NA	NA	NA	NA	1p36.22	NA	Name=Znf143_(16618-1-AP),Rad21,ELF1_(SC-631),CTCF_(C-20),SMC3_(ab9263),PU.1,CTCF_(SC-5916),CTCF	Name=128	NA	rs622623	0.68	0.68	0.695	0.646965	0.7087	0.8095	0.5288	0.472	0.7362	0.72	0.83	0.58	0.52	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.143801	NA	NA	0.695475	0.5	NA	0.572	NA	4.595825
1192	12	95494482	95494482	C	T	intronic	FGD6	NA	NA	NA	ncRNA_exonic	ENSG00000257121	NA	NA	NA	Score=514;Name=lod=164	NA	12q22	NA	NA	NA	NA	rs7135194	0.71	0.71	0.701	0.727037	0.7376	0.6647	0.7046	0.7595	0.7526	0.74	0.66	0.66	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.664355	NA	NA	NA	NA	NA	0.717	NA	4.5957333
1192	12	121454313	121454313	C	A	upstream	C12orf43	NA	NA	NA	upstream	ENSG00000157895	NA	NA	NA	NA	NA	12q24.31	NA	Name=TCF4,Pol2,Mxi1_(bHLH),GATA3_(SC-268),USF1_(SC-8983),eGFP-JunD,YY1_(C-20),TAF7_(SQ-8),Znf143_(16618-1-AP),TAF1,GATA-1,ETS1,USF2,HMGN3,E2F4,POU2F2,GTF2F1_(RAP-74),CHD2_(N-1250),ELF1_(SC-631),Max,Oct-2,YY1,RFX5_(N-494),ZNF263,ERalpha_a,Pol2-4H8,GATA-2,HA-E2F1,JunD,eGFP-JunB,Pol2(b),USF-1,IRF1,TBP,NFKB,ZEB1_(SC-25388),HEY1,c-Myc,SIX5,PAX5-C20	Name=148	NA	rs2258287	0.45	0.45	NA	0.452476	0.333	0.749	0.3689	0.3154	0.5143	0.33	0.76	0.38	0.33	0.3952	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.040047	NA	NA	0.342761	0.306958	NA	0.341	NA	4.5957056
1192	1	21934693	21934693	T	C	intronic	RAP1GAP	NA	NA	NA	intronic	ENSG00000076864	NA	NA	NA	NA	NA	1p36.12	NA	Name=Pol2-4H8,YY1,HMGN3,TAF1,TBP,GTF2F1_(RAP-74),HEY1	NA	NA	rs72660316	0.09	0.09	0.078	0.107628	0.1441	0.0327	0.0836	0.09	0.1881	0.14	0.02	0.1	0.09	0.1272	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.152852	NA	NA	0.13314	0.099864	NA	0.196	NA	4.59556
1192	1	199357243	199357243	A	G	intergenic	LOC100131234,NR5A2	dist=450685;dist=639487	NA	NA	ncRNA_exonic	ENSG00000236468	NA	NA	NA	Score=854;Name=lod=3942	NA	1q32.1	NA	NA	NA	NA	rs502360	0.39	0.39	0.357	0.414936	0.4046	0.2986	0.562	0.4433	0.4029	0.38	0.29	0.53	0.41	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.432566	NA	NA	NA	NA	NA	0.529	NA	4.5954
1192	2	57275499	57275499	G	A	intergenic	CCDC85A,VRK2	dist=662190;dist=998278	NA	NA	ncRNA_exonic	ENSG00000271115	NA	NA	NA	Score=684;Name=lod=803	NA	2p16.1	NA	NA	NA	NA	rs7606524	0.36	0.36	0.339	0.355032	0.4046	0.254	0.4424	0.3162	0.3988	0.41	0.25	0.43	0.34	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.010548	NA	NA	NA	NA	NA	0.312	NA	4.5954
1192	3	80265933	80265933	A	G	intergenic	ROBO1,GBE1	dist=448874;dist=1272917	NA	NA	ncRNA_exonic	ENSG00000239699	NA	NA	NA	Score=653;Name=lod=601	NA	3p12.2	NA	NA	NA	NA	rs9861664	0.2	0.2	0.185	0.175519	0.4046	0.0536	0.1758	0.0461	0.2403	0.4	0.04	0.21	0.07	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.717269	NA	NA	NA	NA	NA	0.152	NA	4.5954
1192	8	98877559	98877559	T	A	intergenic	LAPTM4B,MATN2	dist=12729;dist=3752	NA	NA	ncRNA_exonic	ENSG00000243504	NA	NA	NA	Score=750;Name=lod=1484	NA	8q22.1	NA	NA	NA	NA	rs12543227	0.29	0.29	0.256	0.260783	0.4046	0.3145	0.2435	0.0719	0.3252	0.41	0.31	0.29	0.09	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.089307	NA	NA	NA	NA	NA	0.203	NA	4.5954
1192	8	98877565	98877565	T	A	intergenic	LAPTM4B,MATN2	dist=12735;dist=3746	NA	NA	ncRNA_exonic	ENSG00000243504	NA	NA	NA	Score=750;Name=lod=1484	NA	8q22.1	NA	NA	NA	NA	rs12543228	0.29	0.29	0.257	0.260783	0.4046	0.3145	0.2435	0.0719	0.3252	0.41	0.31	0.29	0.09	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.456253	NA	NA	NA	NA	NA	0.203	NA	4.5954
1192	10	30316872	30316872	T	C	exonic	KIAA1462	NA	synonymous SNV	KIAA1462:NM_020848:exon3:c.A2205G:p.A735A	exonic	ENSG00000165757	NA	synonymous SNV	ENSG00000165757:ENST00000375377:exon3:c.A2205G:p.A735A	NA	NA	10p11.23	NA	NA	NA	NA	rs3739996	0.26	0.26	0.261	0.211262	0.3897	0.2242	0.2406	0.1127	0.1268	0.37	0.22	0.3	0.11	0.3057	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.754064	NA	NA	0.376088	0.130762	NA	0.21	NA	4.5951786
1192	1	201328824	201328824	G	A	intronic	TNNT2	NA	NA	NA	intronic	ENSG00000118194	NA	NA	NA	NA	NA	1q32.1	NA	NA	Name=2	NA	rs2275863	0.24	0.24	0.259	0.277157	0.0944	0.2847	0.1023	0.5439	0.2209	0.1	0.26	0.1	0.55	0.2084	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.265126	NA	NA	0.102024	0.463913	NA	0.348	NA	4.595176
1192	19	41945848	41945848	G	T	upstream	ATP5SL	NA	NA	NA	intronic	ENSG00000105341	NA	NA	NA	NA	NA	19q13.2	NA	Name=YY1_(C-20),Pol2,SP1,Mxi1_(bHLH),GABP,Znf143_(16618-1-AP),TAF1,E2F6_(H-50),GTF2F1_(RAP-74),CEBPB,CTCF,Rad21,ELF1_(SC-631),ZNF263,KAP1,Pol2-4H8,HA-E2F1,YY1,Egr-1,RFX5_(N-494),Pol2(b),IRF1,TBP,USF-1,PAX5-C20,NFKB,HEY1,c-Myc	Name=148	NA	rs13344547	0.48	0.48	0.476	0.484824	0.4085	0.5665	0.549	0.5136	0.3947	0.42	0.54	0.48	0.51	0.4316	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.884198	NA	NA	0.39814	0.495688	NA	0.435	NA	4.5950933
1193	18	21413869	21413869	T	C	exonic	LAMA3	NA	synonymous SNV	LAMA3:NM_001127717:exon24:c.T2901C:p.A967A,LAMA3:NM_198129:exon24:c.T2901C:p.A967A	exonic	ENSG00000053747	NA	synonymous SNV	ENSG00000053747:ENST00000313654:exon24:c.T2901C:p.A967A,ENSG00000053747:ENST00000399516:exon24:c.T2901C:p.A967A	NA	NA	18q11.2	NA	NA	Name=10	NA	rs9962023	0.66	0.66	0.665	0.624401	0.7078	0.7431	0.5476	0.5151	0.6186	0.7	0.76	0.59	0.54	0.6631	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.487621	NA	NA	0.700825	0.546786	NA	0.645	NA	4.5949416
1193	1	19683301	19683301	G	T	intronic	CAPZB	NA	NA	NA	intronic	ENSG00000077549	NA	NA	NA	NA	NA	1p36.13	NA	Name=ERalpha_a	NA	NA	rs169957	0.5	0.5	0.477	0.477835	0.4056	0.5556	0.5274	0.5061	0.3988	0.41	0.6	0.51	0.5	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.044087	NA	NA	NA	NA	NA	0.297	NA	4.5944
1193	2	103281417	103281417	A	C	intronic	SLC9A2	NA	NA	NA	intronic	ENSG00000115616	NA	NA	NA	NA	NA	2q12.1	Score=879;Name=V$HFH1_01	NA	NA	NA	rs11123944	0.35	0.35	0.344	0.322883	0.4056	0.4772	0.3573	0.0817	0.3804	0.38	0.49	0.36	0.12	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.407323	NA	NA	NA	NA	NA	0.464	NA	4.5944
1193	4	111337478	111337478	G	A	intergenic	ELOVL6,ENPEP	dist=217658;dist=59751	NA	NA	ncRNA_exonic	ENSG00000251046	NA	NA	NA	Score=349;Name=lod=35	NA	4q25	NA	NA	NA	NA	rs6815273	0.33	0.33	0.257	0.279353	0.4056	0.4028	0.3847	0.0189	0.2996	0.41	0.43	0.4	0.03	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.224234	NA	NA	NA	NA	NA	0.254	NA	4.5944
1193	22	29449477	29449477	A	G	intronic	ZNRF3	NA	NA	NA	intronic	ENSG00000183579	NA	NA	NA	NA	NA	22q12.1	NA	Name=Pol2-4H8,FOSL2	NA	NA	rs2294239	0.38	0.38	0.354	0.376797	0.4056	0.4395	0.4539	0.1785	0.4959	0.41	0.46	0.43	0.2	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.346337	NA	NA	NA	NA	NA	0.391	NA	4.5944
1193	1	15834360	15834360	A	G	intronic	CASP9	NA	NA	NA	intronic	ENSG00000132906	NA	NA	NA	NA	NA	1p36.21	Score=887;Name=V$BACH2_01	NA	NA	NA	rs2020902	0.1	0.1	0.099	0.0928514	0.1421	0.0317	0.1138	0.0877	0.0971	0.14	0.03	0.14	0.08	0.1225	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.272542	NA	NA	0.141047	0.091466	NA	0.065	NA	4.594353
1193	3	21447724	21447724	C	T	ncRNA_exonic	VENTXP7	NA	NA	NA	ncRNA_exonic	ENSG00000236380	NA	NA	NA	NA	NA	3p24.3	NA	NA	NA	NA	rs11718548	0.29	0.29	0.235	0.318291	0.0726	0.4603	0.4006	0.3381	0.3395	0.07	0.45	0.35	0.37	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.46678	NA	NA	NA	NA	NA	0.268	NA	4.5940666
1193	12	10370763	10370763	A	G	intronic	GABARAPL1	NA	NA	NA	intronic	ENSG00000139112	NA	NA	NA	NA	NA	12p13.2	NA	NA	Name=6	NA	rs73058099	0.07	0.07	0.063	0.0515176	0.1402	0.002	0.0519	0.0219	0.0511	0.15	NA	0.06	0.03	0.1136	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.58353	1.58353	NA	0.152791	0.042442	NA	0.101	NA	4.593409
1193	8	145008706	145008706	C	T	intronic	PLEC	NA	NA	NA	intronic	ENSG00000178209	NA	NA	NA	NA	NA	8q24.3	NA	NA	Name=3	NA	rs11782433	0.24	0.24	0.207	0.23123	0.4066	0.1409	0.2867	0.0605	0.3354	0.4	0.16	0.29	0.06	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.405095	NA	NA	NA	NA	NA	0.275	NA	4.5934
1193	2	96789787	96789787	T	C	exonic	ASTL	NA	synonymous SNV	ASTL:NM_001002036:exon9:c.A1098G:p.L366L	exonic	ENSG00000188886	NA	synonymous SNV	ENSG00000188886:ENST00000342380:exon9:c.A1098G:p.L366L	NA	NA	2q11.1	NA	NA	NA	NA	rs893173	0.36	0.36	0.321	0.329473	0.3549	0.4256	0.3775	0.2829	0.2331	0.37	0.44	0.34	0.25	0.3559	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.255488	NA	NA	0.362558	0.298457	ID=COSM443381;OCCURENCE=1(breast)	0.42	NA	4.5933086
1193	15	79031473	79031473	G	C	intergenic	CHRNB4,LOC646938	dist=97886;dist=12906	NA	NA	intergenic	ENSG00000261303,ENSG00000238166	dist=3636;dist=12976	NA	NA	Score=559;Name=lod=249	NA	15q25.1	Score=785;Name=V$MEF2_01	NA	NA	NA	rs12907432	0.4	0.4	0.37	0.358027	0.7406	0.124	0.3977	0.1074	0.5164	0.74	0.12	0.47	0.14	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.155416	NA	NA	NA	NA	NA	0.529	NA	4.5927334
1193	7	6974934	6974934	A	G	intergenic	CCZ1B,LOC100131257	dist=109008;dist=140467	NA	NA	ncRNA_exonic	ENSG00000242731	NA	NA	NA	NA	NA	7p22.1	NA	Name=ERalpha_a	NA	NA	rs4260806	0.48	0.48	0.489	0.557907	0.4076	0.8591	0.4063	0.4735	0.6237	0.36	0.72	0.35	0.47	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.086457	NA	NA	NA	NA	NA	0.283	NA	4.5924
1193	11	124078704	124078704	G	A	intergenic	VWA5A,OR8G2	dist=61086;dist=16694	NA	NA	ncRNA_exonic	ENSG00000239426	NA	NA	NA	Score=251;Name=lod=14	NA	11q24.2	NA	NA	NA	NA	rs11219499	0.27	0.27	NA	0.278355	0.4076	0.4157	0.3415	0.1293	0.1605	0.3	0.36	0.31	0.1	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.161622	NA	0.05	NA	NA	NA	NA	NA	4.5924
1193	11	124078705	124078705	T	A	intergenic	VWA5A,OR8G2	dist=61087;dist=16693	NA	NA	ncRNA_exonic	ENSG00000239426	NA	NA	NA	Score=251;Name=lod=14	NA	11q24.2	NA	NA	NA	NA	rs11219500	0.27	0.27	NA	0.278355	0.4076	0.4157	0.3415	0.1293	0.1605	0.3	0.36	0.31	0.1	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.29744	1.29744	0.01	NA	NA	NA	NA	NA	4.5924
1193	13	46010676	46010676	C	T	intergenic	SLC25A30,COG3	dist=18160;dist=28354	NA	NA	ncRNA_exonic	ENSG00000229303	NA	NA	NA	Score=669;Name=lod=700	NA	13q14.13	NA	NA	NA	NA	rs9526075	0.27	0.27	0.227	0.236821	0.4076	0.1339	0.3242	0.1755	0.1881	0.41	0.15	0.35	0.14	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.573512	NA	NA	NA	NA	NA	0.268	NA	4.5924
1193	3	45132577	45132577	A	T	intronic	CDCP1	NA	NA	NA	intronic	ENSG00000163814	NA	NA	NA	NA	NA	3p21.31	NA	Name=Pol2-4H8,KAP1	NA	NA	rs6791801	0.33	0.33	0.342	0.337061	0.4076	0.247	0.3242	0.3064	0.408	0.42	0.22	0.31	0.32	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.849116	1.849116	NA	NA	NA	NA	0.326	NA	4.5924
1193	22	39639853	39639853	G	T	intronic	PDGFB	NA	NA	NA	intronic	ENSG00000100311	NA	NA	NA	NA	NA	22q13.1	NA	Name=TAF1,HNF4A,SP1,HNF4G_(SC-6558),HNF4A_(H-171)	Name=11	NA	rs1800817	0.73	0.73	0.698	0.753994	0.6948	0.9048	0.8012	0.6672	0.7434	0.68	0.84	0.76	0.64	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.363472	1.363472	NA	0.713388	0.681358	NA	0.696	NA	4.591812
1193	19	6495736	6495736	A	G	exonic	TUBB4A	NA	synonymous SNV	TUBB4A:NM_006087:exon4:c.T774C:p.V258V	exonic	ENSG00000104833	NA	synonymous SNV	ENSG00000104833:ENST00000594276:exon3:c.T462C:p.V154V,ENSG00000104833:ENST00000264071:exon4:c.T774C:p.V258V,ENSG00000104833:ENST00000540257:exon4:c.T774C:p.V258V	Score=673;Name=lod=723	NA	19p13.3	NA	NA	NA	NA	rs2071347	0.62	0.62	0.586	0.629393	0.7038	0.4643	0.732	0.6929	0.5644	0.69	0.48	0.7	0.64	0.668	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.325906	NA	NA	0.70307	0.680209	NA	0.746	NA	4.5917966
1193	17	44352639	44352639	G	A	intergenic	KANSL1,LRRC37A	dist=49899;dist=19858	NA	NA	UTR3	ENSG00000228696	ENST00000570618:c.*167C>T	NA	NA	Score=595;Name=lod=349	NA	17q21.31	NA	NA	NA	NA	rs36039990	0.12	0.12	0.138	0.0870607	0.2416	0.001	0.1556	0.0166	0.0634	0.24	0.0017	0.19	0.02	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.822017	NA	NA	NA	NA	NA	0.116	NA	4.5917334
1193	1	11129434	11129434	T	C	intronic	EXOSC10	NA	NA	NA	ncRNA_intronic	ENSG00000226849	NA	NA	NA	NA	NA	1p36.22	NA	Name=Max	NA	NA	rs2748878	0.65	0.65	0.581	0.60603	0.7416	0.7837	0.755	0.2035	0.7219	0.74	0.81	0.75	0.23	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.1536	NA	NA	NA	NA	NA	0.609	NA	4.5917333
1193	1	11129437	11129437	T	C	intronic	EXOSC10	NA	NA	NA	ncRNA_intronic	ENSG00000226849	NA	NA	NA	NA	NA	1p36.22	NA	Name=Max	NA	NA	rs2748877	0.65	0.65	0.586	0.60603	0.7416	0.7837	0.755	0.2035	0.7219	0.74	0.81	0.75	0.23	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.767351	NA	NA	NA	NA	NA	0.609	NA	4.5917333
1193	8	14167113	14167113	C	T	intronic	SGCZ	NA	NA	NA	ncRNA_exonic	ENSG00000214366	NA	NA	NA	Score=764;Name=lod=1696	NA	8p22	NA	NA	NA	NA	rs12156020	0.53	0.53	0.517	0.541534	0.7416	0.4901	0.5317	0.3563	0.6462	0.71	0.44	0.58	0.32	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.426786	NA	NA	NA	NA	NA	0.529	NA	4.5917333
1193	13	46010469	46010469	A	C	intergenic	SLC25A30,COG3	dist=17953;dist=28561	NA	NA	ncRNA_exonic	ENSG00000229303	NA	NA	NA	Score=669;Name=lod=700	NA	13q14.13	NA	NA	NA	NA	rs9534145	0.29	0.29	0.258	0.247204	0.4085	0.1399	0.3271	0.1944	0.2065	0.41	0.15	0.35	0.21	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.105719	NA	NA	NA	NA	NA	0.312	NA	4.5915
1193	17	9783566	9783566	G	C	intronic	GLP2R	NA	NA	NA	intronic	ENSG00000065325	NA	NA	NA	NA	NA	17p13.1	NA	NA	Name=3	NA	rs4791903	0.46	0.46	0.469	0.477835	0.4085	0.2917	0.4654	0.7511	0.3804	0.41	0.27	0.46	0.75	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.152501	NA	NA	NA	NA	NA	0.601	NA	4.5915
1193	22	37611807	37611807	T	C	intergenic	SSTR3,RAC2	dist=3454;dist=9503	NA	NA	ncRNA_exonic	ENSG00000226233	NA	NA	NA	Score=491;Name=lod=132	NA	22q13.1	NA	NA	NA	NA	rs5756562	0.28	0.28	0.272	0.266773	0.4085	0.0942	0.2478	0.3343	0.2209	0.39	0.1	0.29	0.33	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.648432	NA	NA	NA	NA	NA	0.29	NA	4.5915
1193	19	8155173	8155173	G	A	intronic	FBN3	NA	NA	NA	intronic	ENSG00000142449	NA	NA	NA	NA	NA	19p13.2	NA	Name=NF-YB,USF2,NF-YA,USF-1	NA	NA	rs12459760	0.19	0.19	0.163	0.175919	0.1163	0.2421	0.2738	0.177	0.0982	0.12	0.26	0.24	0.18	0.1569	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.275846	NA	NA	0.135698	0.171584	NA	0.138	NA	4.591102
1193	17	44352621	44352621	A	G	intergenic	KANSL1,LRRC37A	dist=49881;dist=19876	NA	NA	UTR3	ENSG00000228696	ENST00000570618:c.*185T>C	NA	NA	Score=595;Name=lod=349	NA	17q21.31	NA	NA	NA	NA	rs2696537	0.12	0.12	0.131	0.0872604	0.2425	0.001	0.1556	0.0166	0.0634	0.24	0.0017	0.19	0.02	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.502724	NA	NA	NA	NA	NA	0.109	NA	4.5908334
1193	5	149636109	149636109	G	A	intronic	CAMK2A	NA	NA	NA	intronic	ENSG00000070808	NA	NA	NA	NA	NA	5q32	NA	Name=ZBTB7A_(SC-34508),Rad21,CTCF,CTCF_(SC-5916)	Name=8	NA	rs10463294	0.54	0.54	0.591	0.541134	0.4493	0.5635	0.4366	0.6301	0.5665	0.46	0.58	0.47	0.66	0.5017	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.415049	NA	NA	0.458413	0.627431	NA	0.638	NA	4.590587
1193	14	24776769	24776769	G	T	intronic	CIDEB	NA	NA	NA	UTR3	ENSG00000196943	ENST00000267425:c.*2468G>T	NA	NA	NA	NA	14q12	NA	Name=ZNF263	NA	NA	rs11158635	0.15	0.15	0.135	0.15016	0.1849	0.004	0.3473	0.1573	0.1155	0.2	0.01	0.3	0.14	0.1847	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.804169	NA	NA	0.206512	0.164321	NA	0.13	NA	4.5905547
1193	1	236275077	236275077	C	T	intergenic	NID1,GPR137B	dist=46596;dist=30755	NA	NA	ncRNA_exonic	ENSG00000235371	NA	NA	NA	Score=627;Name=lod=471	NA	1q42.3	NA	NA	NA	NA	rs7542837	0.51	0.51	0.511	0.522764	0.4095	0.4663	0.5375	0.7617	0.364	0.41	0.46	0.49	0.75	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.49193	NA	NA	NA	NA	NA	0.464	NA	4.5905
1193	1	11906981	11906981	T	C	ncRNA_intronic	NPPA-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000242349	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs198370	0.1	0.1	NA	0.127796	0.0765	0.0079	0.085	0.3132	0.0838	0.07	0.01	0.08	0.28	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.850851	NA	NA	NA	NA	NA	0.13	NA	4.5901666
1193	7	102729631	102729631	T	G	intronic	ARMC10	NA	NA	NA	ncRNA_exonic	ENSG00000233025	NA	NA	NA	Score=309;Name=lod=24	NA	7q22.1	NA	NA	NA	NA	rs2298854	0.52	0.52	0.478	0.477436	0.7435	0.4355	0.6398	0.1823	0.5307	0.74	0.43	0.63	0.21	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.49292	NA	NA	NA	NA	NA	0.464	NA	4.5898333
1193	6	29912463	29912463	A	G	intronic	HLA-A	NA	NA	NA	intronic	ENSG00000206503	NA	NA	NA	NA	NA	6p22.1	NA	Name=Pol2,Pol2-4H8	NA	NA	rs9260195	0.42	0.42	0.16	NA	NA	NA	NA	NA	NA	0.43	0.37	0.43	0.47	0.4103	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.024139	NA	NA	NA	NA	NA	0.08	NA	4.5897
1193	2	89247310	89247310	G	A	intergenic	MIR4436A,NONE	dist=135342;dist=NONE	NA	NA	UTR5	ENSG00000243466	ENST00000496168:c.-16C>T	NA	NA	NA	NA	2p11.2	NA	Name=Pol2	NA	NA	rs112599788	0.04	0.04	0.033	0.0593051	0.0825	0.0109	0.0562	0.003	0.1636	0.08	0.01	0.03	0.002	0.0752	0.086	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.051034	NA	NA	0.086308	0.017943	NA	0.029	NA	4.5893254
1193	17	6979179	6979179	A	G	exonic	CLEC10A	NA	synonymous SNV	CLEC10A:NM_006344:exon7:c.T474C:p.P158P,CLEC10A:NM_182906:exon7:c.T546C:p.P182P	exonic	ENSG00000132514	NA	synonymous SNV	ENSG00000132514:ENST00000254868:exon7:c.T546C:p.P182P,ENSG00000132514:ENST00000416562:exon7:c.T465C:p.P155P,ENSG00000132514:ENST00000571664:exon7:c.T474C:p.P158P,ENSG00000132514:ENST00000576617:exon7:c.T465C:p.P155P	NA	NA	17p13.1	NA	NA	NA	NA	rs364569	0.42	0.42	0.418	0.424321	0.3569	0.3294	0.3127	0.6936	0.3067	0.35	0.35	0.3	0.7	0.3671	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.065374	NA	NA	0.353488	0.65547	NA	0.406	NA	4.5891786
1193	1	230410162	230410162	C	T	intronic	GALNT2	NA	NA	NA	intronic	ENSG00000143641	NA	NA	NA	NA	NA	1q42.13	NA	NA	Name=18	NA	rs12091838	0.16	0.16	0.151	0.134185	0.1402	0.0397	0.1513	0.2474	0.0603	0.14	0.05	0.18	0.31	0.1292	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.396144	NA	NA	0.141744	0.237404	NA	0.167	NA	4.588856
1193	7	142162050	142162050	A	G	intergenic	LOC730441,MTRNR2L6	dist=189982;dist=212081	NA	NA	exonic	ENSG00000211724	NA	synonymous SNV	ENSG00000211724:ENST00000390371:exon2:c.T225C:p.D75D	NA	NA	7q34	NA	Name=GATA-1	NA	NA	rs71878	0.28	0.28	0.248	0.290735	0.3012	0.2083	0.4207	0.2148	0.3753	0.3	0.18	0.4	0.26	0.3206	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.362375	NA	NA	0.289474	0.226038	NA	0.341	NA	4.588726
1193	9	117051271	117051271	C	A	intronic	COL27A1	NA	NA	NA	intronic	ENSG00000196739	NA	NA	NA	NA	NA	9q32	NA	NA	Name=10	NA	rs10817583	0.18	0.18	0.177	0.170527	0.1382	0.2827	0.1787	0.1316	0.135	0.13	0.28	0.17	0.14	0.1409	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.344331	NA	NA	0.132356	0.152292	NA	0.123	NA	4.588544
1193	5	25910929	25910929	G	A	intergenic	LOC340107,CDH9	dist=1070237;dist=969780	NA	NA	ncRNA_exonic	ENSG00000251593	NA	NA	NA	Score=572;Name=lod=281	NA	5p14.1	NA	NA	NA	NA	rs10942147	0.24	0.24	0.225	0.213658	0.4115	0.1389	0.2666	0.0189	0.3129	0.42	0.14	0.29	0.02	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.090639	NA	NA	NA	NA	NA	0.152	NA	4.5885
1193	19	39727490	39727490	A	G	intergenic	SYCN,IFNL3	dist=32584;dist=6782	NA	NA	ncRNA_exonic	ENSG00000268510	NA	NA	NA	Score=265;Name=lod=16	NA	19q13.2	NA	NA	NA	NA	rs11883201	0.47	0.47	0.462	0.465655	0.4115	0.4157	0.3934	0.6551	0.3681	0.41	0.47	0.46	0.59	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.958092	NA	NA	NA	NA	NA	0.486	NA	4.5885
1193	9	139847500	139847500	G	A	intronic	LCN12	NA	NA	NA	intronic	ENSG00000184925	NA	NA	NA	NA	NA	9q34.3	NA	Name=GABP	NA	NA	rs34635210	0.12	0.12	0.14	0.109425	0.1412	0.0268	0.1196	0.1664	0.0777	0.15	0.03	0.13	0.16	0.124	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4501	NA	NA	0.146373	0.161513	NA	0.072	NA	4.588427
1193	3	197346558	197346558	A	C	ncRNA_intronic	LOC220729	NA	NA	NA	ncRNA_intronic	ENSG00000214135	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs73891642	0.06	0.06	0.072	0.0792732	0.0785	NA	0.0375	0.1793	0.0562	0.08	NA	0.04	0.14	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.197156	NA	NA	NA	NA	NA	0.065	NA	4.5881666
1193	8	144876159	144876159	G	A	intronic	SCRIB	NA	NA	NA	intronic	ENSG00000180900	NA	NA	NA	NA	NA	8q24.3	NA	Name=c-Myc,YY1,CTCF_(SC-5916),CTCF,YY1_(C-20)	Name=4	NA	rs7460093	0.25	0.25	0.228	0.20607	0.497	0.0079	0.3963	0.0151	0.2342	0.51	0.0035	0.41	0.03	0.393	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.136284	NA	NA	0.521977	0.108034	NA	0.246	NA	4.588023
1193	19	14974930	14974930	G	A	intergenic	OR7A10,OR7A17	dist=22241;dist=16308	NA	NA	ncRNA_exonic	ENSG00000172148	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs10407452	0.76	0.76	0.758	0.765775	0.6869	0.9435	0.683	0.7368	0.7618	0.71	0.91	0.67	0.72	0.7253	0.91	1	T	.	.	.	.	0.064	N	1.000	P	.	.	.	.	-0.948	T	0.000	T	.	-3.179	0.001	2.26	0.156	-0.716	5.598	-3.179013	NA	1	NA	NA	NA	0.783	NA	4.5878
1193	19	9014551	9014551	T	C	exonic	MUC16	NA	synonymous SNV	MUC16:NM_024690:exon31:c.A38424G:p.R12808R	exonic	ENSG00000181143	NA	synonymous SNV	ENSG00000181143:ENST00000397910:exon31:c.A38424G:p.R12808R	NA	NA	19p13.2	NA	NA	NA	NA	rs12459127	0.32	0.32	0.215	0.313898	0.3787	0.3095	0.353	0.2126	0.3609	0.37	0.28	0.36	0.23	0.3577	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.315711	NA	NA	0.342563	0.192466	NA	0.283	NA	4.5877036
1193	1	209805895	209805895	C	G	intronic	LAMB3	NA	NA	NA	intronic	ENSG00000196878	NA	NA	NA	NA	NA	1q32.2	NA	Name=Pol2(b)	NA	NA	rs2072940	0.11	0.11	0.09	0.0954473	0.1412	0.0645	0.1427	0.0613	0.093	0.14	0.09	0.15	0.07	0.1343	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.833749	1.833749	NA	0.136967	0.076484	NA	0.138	NA	4.587533
1193	1	19474975	19474975	T	G	intronic	UBR4	NA	NA	NA	intronic	ENSG00000127481	NA	NA	NA	NA	NA	1p36.13	NA	NA	Name=4	NA	rs2296108	0.49	0.49	0.499	0.516773	0.4125	0.7579	0.536	0.4463	0.4571	0.38	0.72	0.45	0.41	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.758587	NA	NA	NA	NA	NA	0.5	NA	4.5875
1193	1	27534176	27534176	G	T	intergenic	SLC9A1,WDTC1	dist=52555;dist=26831	NA	NA	ncRNA_exonic	ENSG00000225159	NA	NA	NA	Score=620;Name=lod=441	NA	1p36.11	NA	NA	NA	NA	rs34949537	0.32	0.32	0.268	0.324081	0.4125	0.1468	0.2738	0.3858	0.3681	0.42	0.14	0.31	0.36	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.364454	2.364454	NA	NA	NA	NA	0.297	NA	4.5875
1193	4	139482113	139482113	G	C	intergenic	LINC00499,CCRN4L	dist=136615;dist=454830	NA	NA	ncRNA_exonic	ENSG00000248795	NA	NA	NA	Score=613;Name=lod=415	NA	4q28.3	NA	NA	NA	NA	rs10015897	0.41	0.41	0.423	0.442492	0.4125	0.1925	0.438	0.6089	0.5092	0.41	0.22	0.46	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.943729	NA	NA	NA	NA	ID=COSN167331;OCCURENCE=1(lung),1(large_intestine)	0.428	NA	4.5875
1193	6	151546985	151546985	C	T	intergenic	MTHFD1L,AKAP12	dist=123962;dist=14149	NA	NA	ncRNA_exonic	ENSG00000213087	NA	NA	NA	Score=713;Name=lod=1050	NA	6q25.1	NA	NA	NA	NA	rs7760450	0.41	0.41	0.4	0.421126	0.4125	0.4365	0.3818	0.4365	0.4213	0.42	0.43	0.37	0.42	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.00195	NA	NA	NA	NA	NA	0.42	NA	4.5875
1193	16	30500761	30500761	G	A	intronic	ITGAL	NA	NA	NA	intronic	ENSG00000005844	NA	NA	NA	NA	NA	16p11.2	NA	NA	Name=3	NA	rs3087438	0.4	0.4	0.394	0.312899	0.4125	0.6101	0.317	0.143	0.1309	0.42	0.65	0.32	0.15	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.108567	NA	NA	NA	NA	NA	0.304	NA	4.5875
1193	18	29542204	29542204	A	G	intergenic	TRAPPC8,RNF125	dist=19113;dist=56241	NA	NA	ncRNA_exonic	ENSG00000265273	NA	NA	NA	Score=655;Name=lod=611	NA	18q12.1	NA	NA	NA	NA	rs4799610	0.39	0.39	0.364	0.365415	0.4125	0.3363	0.5951	0.2542	0.3344	0.41	0.34	0.55	0.32	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.563611	NA	NA	NA	NA	ID=COSN165633;OCCURENCE=1(NS)	0.471	NA	4.5875
1193	18	29542839	29542839	C	G	intergenic	TRAPPC8,RNF125	dist=19748;dist=55606	NA	NA	ncRNA_exonic	ENSG00000265273	NA	NA	NA	Score=640;Name=lod=530	NA	18q12.1	NA	NA	NA	NA	rs8098106	0.39	0.39	0.392	0.365216	0.4125	0.3363	0.5937	0.2542	0.3344	0.41	0.34	0.55	0.32	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.169216	NA	NA	NA	NA	ID=COSN165634;OCCURENCE=1(breast)	0.471	NA	4.5875
1193	18	29543270	29543270	G	A	intergenic	TRAPPC8,RNF125	dist=20179;dist=55175	NA	NA	ncRNA_exonic	ENSG00000265273	NA	NA	NA	Score=640;Name=lod=532	NA	18q12.1	NA	NA	NA	NA	rs6506952	0.39	0.39	0.364	0.365016	0.4125	0.3363	0.5937	0.2534	0.3344	0.41	0.34	0.55	0.31	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.891015	NA	NA	NA	NA	NA	0.471	NA	4.5875
1193	18	44580919	44580919	C	T	intronic	KATNAL2	NA	NA	NA	intronic	ENSG00000167216	NA	NA	NA	NA	NA	18q21.1	NA	Name=USF-1,USF2,USF1_(SC-8983)	NA	NA	rs2576041	0.46	0.46	0.455	0.478235	0.4125	0.4762	0.5908	0.4607	0.4918	0.42	0.45	0.57	0.45	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.688445	NA	NA	NA	NA	NA	0.428	NA	4.5875
1193	22	30221826	30221826	T	A	intronic	ASCC2	NA	NA	NA	intronic	ENSG00000100325	NA	NA	NA	Score=554;Name=lod=239	NA	22q12.2	NA	NA	NA	NA	rs9306465	0.37	0.37	0.372	0.284744	0.4125	0.5675	0.2493	0.0968	0.1411	0.42	0.58	0.28	0.11	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.732403	1.732403	NA	NA	NA	NA	0.297	NA	4.5875
1193	17	16004537	16004537	G	A	intronic	NCOR1	NA	NA	NA	intronic	ENSG00000141027	NA	NA	NA	NA	NA	17p11.2	NA	NA	Name=5	NA	rs62073621	0.07	0.07	0.054	0.0503195	0.1551	0.001	0.0937	0.0023	0.0276	0.15	0.0017	0.1	0.002	0.107	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.288173	NA	NA	0.150814	0.028597	NA	0.058	NA	4.587086
1193	3	187088903	187088903	C	A	exonic	RTP4	NA	synonymous SNV	RTP4:NM_022147:exon2:c.C483A:p.I161I	exonic	ENSG00000136514	NA	synonymous SNV	ENSG00000136514:ENST00000259030:exon2:c.C483A:p.I161I	NA	NA	3q27.3	NA	NA	NA	NA	rs1533595	0.41	0.41	0.376	0.384585	0.3469	0.7351	0.4942	0.1407	0.3139	0.34	0.69	0.43	0.16	0.3822	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.28046	NA	NA	0.35093	0.207217	NA	0.261	NA	4.5866366
1193	1	6190215	6190215	C	T	intronic	CHD5	NA	NA	NA	exonic	ENSG00000116254	NA	nonsynonymous SNV	ENSG00000116254:ENST00000377999:exon2:c.G283A:p.G95S	NA	NA	1p36.31	NA	NA	NA	NA	rs9434662	0.29	0.29	0.298	0.283946	0.169	0.6339	0.1427	0.1664	0.3006	0.17	0.66	0.17	0.15	0.2335	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.170459	NA	NA	0.177558	0.166364	NA	0.152	NA	4.5866087
1193	15	25953068	25953068	G	A	intronic	ATP10A	NA	NA	NA	intronic	ENSG00000206190	NA	NA	NA	NA	NA	15q12	NA	NA	Name=2	NA	rs2291355	0.33	0.33	0.303	0.33147	0.4135	0.4931	0.2695	0.084	0.4591	0.41	0.44	0.28	0.1	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.801967	NA	NA	NA	NA	NA	0.326	NA	4.5865
1193	17	48313230	48313230	G	A	intergenic	COL1A1,TMEM92	dist=34230;dist=35537	NA	NA	ncRNA_exonic	ENSG00000249838	NA	NA	NA	Score=676;Name=lod=745	NA	17q21.33	NA	NA	NA	NA	rs62063032	0.3	0.3	0.259	0.258586	0.4135	0.1786	0.4337	0.084	0.2935	0.43	0.22	0.43	0.11	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.145466	NA	NA	NA	NA	NA	0.196	NA	4.5865
1193	19	2939076	2939076	G	C	intronic	ZNF77	NA	NA	NA	intronic	ENSG00000175691	NA	NA	NA	Score=289;Name=lod=20	NA	19p13.3	NA	NA	NA	NA	rs78850150	NA	NA	0.281	0.379792	0.4135	0.4355	0.4971	0.2867	0.3303	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.712263	NA	NA	NA	NA	NA	NA	NA	4.5865
1193	20	25257462	25257462	G	A	intronic	PYGB	NA	NA	NA	intronic	ENSG00000100994	NA	NA	NA	NA	NA	20p11.21	NA	Name=GR	NA	NA	rs2424699	0.49	0.49	0.466	0.466054	0.4135	0.9087	0.3141	0.2428	0.4734	0.42	0.92	0.32	0.23	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.527363	NA	NA	NA	NA	NA	0.42	NA	4.5865
1193	20	31381229	31381229	G	A	intronic	DNMT3B	NA	NA	NA	intronic	ENSG00000088305	NA	NA	NA	NA	NA	20q11.21	NA	Name=CTCF	NA	NA	rs993419	0.62	0.62	0.588	0.658347	0.4135	0.9931	0.6354	0.5643	0.7086	0.43	0.99	0.61	0.5	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.973485	NA	NA	NA	NA	NA	0.5	NA	4.5865
1193	11	63978067	63978067	C	G	intronic	FERMT3	NA	NA	NA	intronic	ENSG00000149781	NA	NA	NA	NA	NA	11q13.1	NA	Name=Pol2-4H8	NA	NA	rs78038516	0.1	0.1	0.088	0.0758786	0.1382	0.0784	0.0821	0.025	0.0736	0.15	0.09	0.09	0.03	0.1184	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.131632	NA	NA	0.15697	0.049523	NA	0.138	NA	4.58643
1193	12	6435575	6435575	C	T	intronic	PLEKHG6	NA	NA	NA	intronic	ENSG00000008323	NA	NA	NA	NA	NA	12p13.31	NA	Name=SMC3_(ab9263),CTCF,Rad21,CTCF_(C-20)	Name=111	NA	rs10849442	0.47	0.47	0.501	0.448482	0.4891	0.2679	0.33	0.6899	0.3507	0.51	0.28	0.37	0.68	0.4546	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.440081	NA	NA	0.470349	0.635951	NA	0.536	NA	4.585951
1193	5	25910023	25910023	A	G	intergenic	LOC340107,CDH9	dist=1069331;dist=970686	NA	NA	ncRNA_exonic	ENSG00000251593	NA	NA	NA	Score=721;Name=lod=1130	NA	5p14.1	NA	NA	NA	NA	rs7731520	0.25	0.25	0.231	0.227236	0.4145	0.1389	0.2709	0.0567	0.3252	0.42	0.14	0.3	0.05	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.351938	NA	NA	NA	NA	NA	0.159	NA	4.5855
1193	5	25910078	25910078	A	T	intergenic	LOC340107,CDH9	dist=1069386;dist=970631	NA	NA	ncRNA_exonic	ENSG00000251593	NA	NA	NA	Score=749;Name=lod=1469	NA	5p14.1	NA	NA	NA	NA	rs7731547	0.25	0.25	0.231	0.234824	0.4145	0.1389	0.2709	0.0862	0.3241	0.42	0.14	0.3	0.08	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.160361	NA	NA	NA	NA	NA	0.181	NA	4.5855
1193	5	176004903	176004903	T	C	intronic	CDHR2	NA	NA	NA	intronic	ENSG00000074276	NA	NA	NA	NA	NA	5q35.2	NA	Name=PAX5-C20	NA	NA	rs11747451	0.23	0.23	0.187	0.199481	0.4145	0.0288	0.4135	0.0628	0.1871	0.41	0.02	0.42	0.07	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.505723	NA	NA	NA	NA	NA	0.239	NA	4.5855
1193	6	32608981	32608981	A	G	intronic	HLA-DQA1	NA	NA	NA	intronic	ENSG00000196735	NA	NA	NA	NA	NA	6p21.32	NA	Name=Pol2-4H8	NA	NA	rs115508098	NA	NA	NA	0.383586	0.4145	0.3393	0.5159	0.3971	0.2853	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.390543	NA	NA	NA	NA	NA	NA	NA	4.5855
1193	3	3887876	3887876	T	C	exonic	LRRN1	NA	synonymous SNV	LRRN1:NM_020873:exon2:c.T1551C:p.N517N	exonic	ENSG00000175928	NA	synonymous SNV	ENSG00000175928:ENST00000319331:exon2:c.T1551C:p.N517N	Score=557;Name=lod=244	NA	3p26.2	NA	NA	NA	NA	rs2120609	0.52	0.52	0.495	0.478435	0.7336	0.254	0.572	0.4274	0.4499	0.75	0.26	0.57	0.42	0.6268	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.15041	NA	NA	0.720814	0.455969	NA	0.623	NA	4.5854526
1193	7	33060946	33060946	A	G	exonic	NT5C3A	NA	synonymous SNV	NT5C3A:NM_001002010:exon5:c.T393C:p.Y131Y,NT5C3A:NM_001002009:exon6:c.T276C:p.Y92Y,NT5C3A:NM_016489:exon6:c.T276C:p.Y92Y,NT5C3A:NM_001166118:exon7:c.T240C:p.Y80Y	exonic	ENSG00000122643	NA	synonymous SNV	ENSG00000122643:ENST00000242210:exon5:c.T393C:p.Y131Y,ENSG00000122643:ENST00000405342:exon5:c.T276C:p.Y92Y,ENSG00000122643:ENST00000409787:exon5:c.T276C:p.Y92Y,ENSG00000122643:ENST00000396152:exon6:c.T276C:p.Y92Y,ENSG00000122643:ENST00000381626:exon7:c.T240C:p.Y80Y,ENSG00000122643:ENST00000409467:exon7:c.T240C:p.Y80Y	Score=521;Name=lod=174	NA	7p14.3	NA	NA	NA	NA	rs3750117	0.68	0.68	0.717	0.666933	0.7087	0.4613	0.7176	0.8139	0.6012	0.71	0.5	0.7	0.83	0.6807	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.794299	NA	NA	0.691851	0.766349	NA	0.725	NA	4.5854156
1194	19	11241915	11241915	A	G	intronic	LDLR	NA	NA	NA	intronic	ENSG00000130164	NA	NA	NA	NA	NA	19p13.2	NA	Name=ZNF263,c-Fos,CTCF_(SC-5916),PAX5-C20,YY1_(C-20),SMC3_(ab9263),Pol2,PU.1,Znf143_(16618-1-AP),p300,CTCF,Rad21	Name=137	NA	rs6413504	0.36	0.36	0.319	0.351038	0.4801	0.2996	0.4971	0.1445	0.4468	0.49	0.27	0.48	0.18	0.4387	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.058381	NA	NA	0.496395	0.198139	NA	0.312	NA	4.584805
1194	18	693977	693977	G	A	intronic	ENOSF1	NA	NA	NA	intronic	ENSG00000132199	NA	NA	NA	NA	NA	18p11.32	NA	NA	Name=3	NA	rs2305995	NA	NA	0.377	0.400359	0.2137	0.5873	0.2594	0.5121	0.3487	NA	NA	NA	NA	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.396193	NA	NA	0.20176	0.486272	NA	0.384	NA	4.58454
1194	6	81083790	81083790	T	C	intergenic	BCKDHB,FAM46A	dist=27803;dist=1371657	NA	NA	ncRNA_exonic	ENSG00000219547	NA	NA	NA	Score=642;Name=lod=543	NA	6q14.1	NA	NA	NA	NA	rs7742251	0.45	0.45	0.386	0.454073	0.4155	0.6667	0.6398	0.1876	0.5031	0.42	0.64	0.6	0.18	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.206261	NA	NA	NA	NA	NA	0.457	NA	4.5845
1194	6	81083924	81083924	T	C	intergenic	BCKDHB,FAM46A	dist=27937;dist=1371523	NA	NA	ncRNA_exonic	ENSG00000219547	NA	NA	NA	Score=728;Name=lod=1207	NA	6q14.1	NA	NA	NA	NA	rs7746229	0.45	0.45	0.374	0.439497	0.4155	0.6667	0.6369	0.1331	0.5041	0.42	0.64	0.6	0.15	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.221898	NA	NA	NA	NA	NA	0.435	NA	4.5845
1194	11	124235672	124235672	T	C	intergenic	OR8D2,OR8B2	dist=45579;dist=16626	NA	NA	ncRNA_exonic	ENSG00000227737	NA	NA	NA	NA	NA	11q24.2	Score=817;Name=V$POU3F2_01	NA	NA	NA	rs3901494	0.42	0.42	0.392	0.373403	0.4155	0.4613	0.4078	0.3918	0.1902	0.4	0.47	0.42	0.37	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.295735	1.295735	NA	NA	NA	NA	0.304	NA	4.5845
1194	16	97610	97610	G	A	intronic	POLR3K	NA	NA	NA	intronic	ENSG00000161980	NA	NA	NA	NA	NA	16p13.3	NA	NA	Name=2	NA	rs798675	0.47	0.47	0.486	0.486022	0.4155	0.3968	0.5086	0.6112	0.4652	0.4	0.42	0.49	0.62	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.136063	NA	NA	NA	NA	ID=COSN165079;OCCURENCE=1(breast)	0.399	NA	4.5845
1194	16	1244887	1244887	T	A	intronic	CACNA1H	NA	NA	NA	intronic	ENSG00000196557	NA	NA	NA	NA	NA	16p13.3	NA	Name=GABP,SMC3_(ab9263),Rad21,CTCF,CTCF_(SC-5916),CTCF_(C-20),ZBTB7A_(SC-34508)	NA	NA	rs3751661	0.35	0.35	0.36	0.344449	0.4155	0.1806	0.3084	0.4856	0.2751	0.41	0.15	0.31	0.53	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.376883	NA	NA	NA	NA	NA	0.362	NA	4.5845
1194	19	50322631	50322631	T	G	intronic	MED25	NA	NA	NA	intronic	ENSG00000104973	NA	NA	NA	NA	NA	19q13.33	NA	Name=ZBTB7A_(SC-34508)	NA	NA	rs370599078	NA	NA	0.213	0.451877	0.4155	0.4762	0.4568	0.475	0.4294	NA	NA	NA	NA	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.25673	NA	NA	NA	NA	NA	0.261	NA	4.5845
1194	18	77171061	77171061	T	G	exonic	NFATC1	NA	synonymous SNV	NFATC1:NM_006162:exon2:c.T786G:p.P262P,NFATC1:NM_172387:exon2:c.T747G:p.P249P,NFATC1:NM_172389:exon2:c.T747G:p.P249P,NFATC1:NM_172390:exon2:c.T786G:p.P262P	exonic	ENSG00000131196	NA	synonymous SNV	ENSG00000131196:ENST00000253506:exon2:c.T786G:p.P262P,ENSG00000131196:ENST00000318065:exon2:c.T747G:p.P249P,ENSG00000131196:ENST00000329101:exon2:c.T747G:p.P249P,ENSG00000131196:ENST00000427363:exon2:c.T786G:p.P262P,ENSG00000131196:ENST00000542384:exon2:c.T786G:p.P262P,ENSG00000131196:ENST00000586434:exon2:c.T747G:p.P249P,ENSG00000131196:ENST00000587635:exon2:c.T786G:p.P262P,ENSG00000131196:ENST00000591814:exon2:c.T786G:p.P262P,ENSG00000131196:ENST00000592223:exon2:c.T747G:p.P249P	NA	NA	18q23	NA	NA	Name=2	NA	rs2230112	0.63	0.63	0.586	0.590655	0.7018	0.8562	0.768	0.1483	0.6748	0.7	0.85	0.75	0.16	0.682	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.936821	NA	NA	0.698593	0.256856	NA	0.565	NA	4.5842736
1194	17	2186100	2186100	C	T	exonic	SMG6	NA	synonymous SNV	SMG6:NM_017575:exon8:c.G2502A:p.Q834Q	exonic	ENSG00000070366	NA	synonymous SNV	ENSG00000070366:ENST00000263073:exon8:c.G2502A:p.Q834Q,ENSG00000070366:ENST00000544865:exon8:c.G2409A:p.Q803Q	NA	NA	17p13.3	NA	NA	NA	NA	rs749240	0.4	0.4	0.421	0.426318	0.3618	0.2371	0.3573	0.6914	0.3783	0.37	0.22	0.35	0.68	0.3713	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.238667	NA	NA	0.349302	0.609623	NA	0.457	NA	4.5842646
1194	7	29520042	29520042	G	A	intronic	CHN2	NA	NA	NA	intronic	ENSG00000106069	NA	NA	NA	NA	NA	7p14.3	NA	NA	Name=8	NA	rs1476991	0.34	0.34	0.342	0.334665	0.4165	0.3849	0.2939	0.1649	0.4571	0.4	0.43	0.31	0.17	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.455816	NA	NA	NA	NA	NA	0.275	NA	4.5835
1194	19	9014569	9014569	A	G	exonic	MUC16	NA	synonymous SNV	MUC16:NM_024690:exon31:c.T38406C:p.G12802G	exonic	ENSG00000181143	NA	synonymous SNV	ENSG00000181143:ENST00000397910:exon31:c.T38406C:p.G12802G	NA	NA	19p13.2	NA	NA	NA	NA	rs12462963	0.27	0.27	0.188	0.323083	0.4026	0.3095	0.3689	0.2133	0.3712	0.33	0.23	0.36	0.15	0.3723	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.279741	NA	NA	0.308428	0.145791	NA	0.319	NA	4.5833386
1194	2	198265526	198265526	A	G	exonic	SF3B1	NA	synonymous SNV	SF3B1:NM_012433:exon18:c.T2631C:p.G877G	exonic	ENSG00000115524	NA	synonymous SNV	ENSG00000115524:ENST00000335508:exon18:c.T2631C:p.G877G	Score=738;Name=lod=1325	NA	2q33.1	NA	NA	NA	NA	rs788018	0.71	0.71	0.75	0.716653	0.7276	0.5099	0.6326	0.8812	0.7556	0.73	0.59	0.64	0.87	0.6708	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.77271	NA	NA	0.685116	0.832652	NA	0.717	NA	4.5831506
1194	7	142566163	142566163	C	G	intronic	EPHB6	NA	NA	NA	intronic	ENSG00000106123	NA	NA	NA	NA	NA	7q34	NA	Name=CTCF	Name=4	NA	rs6944571	0.49	0.49	0.499	0.501398	0.5149	0.1468	0.4179	0.9334	0.3282	0.5	0.13	0.45	0.91	0.4515	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.695323	NA	NA	0.450814	0.864503	NA	0.5	NA	4.582786
1194	10	101604207	101604207	C	T	exonic	ABCC2	NA	synonymous SNV	ABCC2:NM_000392:exon28:c.C3972T:p.I1324I	exonic	ENSG00000023839	NA	synonymous SNV	ENSG00000023839:ENST00000370449:exon28:c.C3972T:p.I1324I	NA	NA	10q24.2	NA	NA	NA	NA	rs3740066	0.3	0.3	0.29	0.288139	0.3708	0.247	0.3415	0.2163	0.3047	0.36	0.26	0.38	0.21	0.342	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.550938	NA	NA	0.371279	0.259873	ID=COSM147024;OCCURENCE=1(stomach)	0.348	NA	4.5825876
1194	1	26508480	26508480	T	C	intronic	CNKSR1	NA	NA	NA	intronic	ENSG00000142675	NA	NA	NA	NA	NA	1p36.11	NA	NA	Name=34	NA	rs2275945	0.3	0.3	0.245	0.336462	0.1014	0.6329	0.4193	0.1573	0.456	0.1	0.65	0.37	0.14	0.2179	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.35441	NA	NA	0.09814	0.164094	NA	0.239	NA	4.58256
1194	18	7567803	7567803	C	G	UTR5	PTPRM	NM_002845:c.-14C>G,NM_001105244:c.-14C>G	NA	NA	UTR5	ENSG00000173482	ENST00000332175:c.-14C>G,ENST00000580170:c.-14C>G	NA	NA	NA	NA	18p11.23	NA	NA	Name=18	NA	rs67536179	0.48	0.48	0.438	0.52496	0.2018	0.7153	0.4035	0.7352	0.4632	0.19	0.72	0.36	0.73	0.3367	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.423288	NA	NA	0.212326	0.649637	NA	0.014	NA	4.5825074
1194	12	31542191	31542191	A	G	intronic	DENND5B	NA	NA	NA	intronic	ENSG00000170456	NA	NA	NA	NA	NA	12p11.21	NA	NA	Name=2	NA	rs10843937	0.47	0.47	0.45	0.470847	0.4175	0.5764	0.634	0.3495	0.4652	0.42	0.59	0.59	0.35	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.488334	1.488334	NA	NA	NA	NA	0.493	NA	4.5825
1194	3	58415590	58415590	C	A	intronic	PDHB	NA	NA	NA	UTR3	ENSG00000168291	ENST00000469364:c.*23G>T	NA	NA	NA	NA	3p14.3	NA	Name=PAX5-N19,PAX5-C20	Name=49	NA	rs2070662	0.75	0.75	0.764	0.740415	0.8091	0.7996	0.7248	0.6104	0.7955	0.79	0.81	0.76	0.63	0.7751	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.010438	NA	NA	NA	NA	NA	0.775	NA	4.5824667
1194	3	197346566	197346566	T	G	ncRNA_intronic	LOC220729	NA	NA	NA	ncRNA_intronic	ENSG00000214135	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs28703192	0.13	0.13	0.151	0.166334	0.0845	0.0248	0.0562	0.4342	0.1125	0.08	0.03	0.06	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.352551	NA	NA	NA	NA	NA	0.101	NA	4.5821666
1194	3	197348786	197348786	C	A	ncRNA_intronic	LOC220729	NA	NA	NA	ncRNA_intronic	ENSG00000214135	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs60794747	0.13	0.13	0.149	0.167931	0.0845	0.0248	0.0562	0.4387	0.1145	0.08	0.03	0.06	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.850555	NA	NA	NA	NA	NA	0.101	NA	4.5821666
1194	3	170723276	170723276	G	A	intronic	SLC2A2	NA	NA	NA	intronic	ENSG00000163581	NA	NA	NA	NA	NA	3q26.2	NA	Name=JunD	NA	NA	rs5406	0.18	0.18	0.207	0.199281	0.1352	0.0169	0.1715	0.4281	0.1636	0.14	0.02	0.19	0.41	0.1501	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.846716	NA	NA	0.13314	0.39537	NA	0.333	NA	4.58156
1194	3	97926625	97926625	A	G	intergenic	OR5H15,OR5H6	dist=38140;dist=56504	NA	NA	ncRNA_exonic	ENSG00000249975	NA	NA	NA	Score=467;Name=lod=105	NA	3q11.2	NA	NA	NA	NA	rs9837684	0.24	0.24	0.216	0.247404	0.4185	0.0397	0.2334	0.2421	0.3027	0.38	0.03	0.25	0.24	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.818365	NA	NA	NA	NA	NA	0.196	NA	4.5815
1194	3	97940932	97940932	A	G	intergenic	OR5H15,OR5H6	dist=52447;dist=42197	NA	NA	ncRNA_exonic	ENSG00000248507	NA	NA	NA	Score=321;Name=lod=27	NA	3q11.2	NA	NA	NA	NA	rs35658290	0.26	0.26	0.239	0.251597	0.4185	0.0387	0.2334	0.2587	0.3027	0.41	0.03	0.27	0.27	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.176501	2.176501	NA	NA	NA	NA	0.246	NA	4.5815
1194	3	111851817	111851817	C	T	intronic	GCSAM	NA	NA	NA	intronic	ENSG00000174500	NA	NA	NA	NA	NA	3q13.2	NA	Name=EBF,Pol2-4H8	NA	NA	rs950528	0.43	0.43	0.412	0.409145	0.4185	0.4236	0.438	0.3548	0.4376	0.43	0.48	0.44	0.36	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.179015	NA	NA	NA	NA	NA	0.391	NA	4.5815
1194	6	158658937	158658937	T	C	intergenic	GTF2H5,TULP4	dist=38561;dist=74755	NA	NA	ncRNA_exonic	ENSG00000188451	NA	NA	NA	Score=606;Name=lod=387	NA	6q25.3	NA	NA	NA	NA	rs7753292	0.37	0.37	0.328	0.330671	0.4185	0.4573	0.4611	0.1044	0.3231	0.43	0.47	0.43	0.13	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.495293	1.495293	NA	NA	NA	NA	0.384	NA	4.5815
1194	6	158659332	158659332	C	G	intergenic	GTF2H5,TULP4	dist=38956;dist=74360	NA	NA	ncRNA_exonic	ENSG00000188451	NA	NA	NA	Score=608;Name=lod=396	NA	6q25.3	NA	NA	NA	NA	rs7741588	0.37	0.37	0.336	0.330671	0.4185	0.4573	0.4611	0.1044	0.3231	0.43	0.47	0.43	0.13	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.132891	NA	NA	NA	NA	NA	0.377	NA	4.5815
1194	6	158659406	158659406	G	C	intergenic	GTF2H5,TULP4	dist=39030;dist=74286	NA	NA	ncRNA_exonic	ENSG00000188451	NA	NA	NA	Score=608;Name=lod=396	NA	6q25.3	NA	NA	NA	NA	rs9295369	0.37	0.37	0.333	0.330471	0.4185	0.4573	0.4611	0.1044	0.3221	0.43	0.47	0.43	0.13	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.780764	NA	NA	NA	NA	NA	0.384	NA	4.5815
1194	11	113659993	113659993	A	C	intergenic	CLDN25,USP28	dist=8786;dist=8604	NA	NA	ncRNA_exonic	ENSG00000255870,ENSG00000256167	NA	NA	NA	Score=634;Name=lod=504	NA	11q23.2	NA	NA	NA	NA	rs906846	0.49	0.49	0.434	0.489816	0.4185	0.5804	0.4669	0.5514	0.4029	0.42	0.56	0.48	0.54	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.183025	NA	NA	NA	NA	NA	0.572	NA	4.5815
1194	12	96360350	96360350	A	T	intronic	AMDHD1	NA	NA	NA	intronic	ENSG00000139344	NA	NA	NA	NA	NA	12q23.1	NA	Name=GATA-2	NA	NA	rs1025606	0.52	0.52	0.529	0.501597	0.4185	0.4821	0.5893	0.6929	0.2863	0.41	0.52	0.54	0.67	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.99289	1.99289	NA	NA	NA	NA	0.58	NA	4.5815
1194	6	133055612	133055612	G	C	ncRNA_intronic	VNN3	NA	NA	NA	exonic	ENSG00000093134	NA	nonsynonymous SNV	ENSG00000093134:ENST00000417437:exon1:c.C220G:p.P74A	NA	NA	6q23.2	NA	NA	NA	NA	rs764263	0.24	0.24	0.225	0.236422	0.3141	0.2252	0.3256	0.0893	0.3037	0.28	0.24	0.34	0.09	0.2927	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.255901	1.255901	0	0.312093	0.116432	NA	NA	NA	4.581107
1194	8	145582839	145582839	T	C	intronic	SLC52A2	NA	NA	NA	intronic	ENSG00000185803	NA	NA	NA	NA	NA	8q24.3	NA	NA	Name=5	NA	rs3817681	0.43	0.43	0.383	0.457268	0.4195	0.6875	0.5202	0.1278	0.6595	0.41	0.68	0.49	0.14	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.792504	NA	NA	NA	NA	NA	0.37	NA	4.5805
1194	14	107183677	107183677	G	A	intergenic	LINC00221,NONE	dist=232148;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000254056	NA	NA	NA	Score=329;Name=lod=29	NA	14q32.33	NA	NA	NA	NA	rs28362068	0.55	0.55	0.493	0.642572	0.4195	0.5069	0.4885	0.9629	0.6881	0.39	0.45	0.53	0.92	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.483346	NA	NA	NA	NA	NA	0.471	NA	4.5805
1194	1	33235626	33235626	G	A	exonic	KIAA1522	NA	synonymous SNV	KIAA1522:NM_001198972:exon6:c.G669A:p.A223A,KIAA1522:NM_020888:exon6:c.G846A:p.A282A	exonic	ENSG00000162522	NA	synonymous SNV	ENSG00000162522:ENST00000373480:exon6:c.G669A:p.A223A,ENSG00000162522:ENST00000373481:exon6:c.G702A:p.A234A,ENSG00000162522:ENST00000401073:exon6:c.G846A:p.A282A	NA	NA	1p35.1	NA	NA	NA	NA	rs3737995	0.32	0.32	0.276	0.307907	0.3648	0.4484	0.438	0.0333	0.3834	0.37	0.45	0.4	0.05	0.368	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.271443	NA	NA	0.353641	0.101392	NA	0.341	NA	4.5802256
1194	15	22709847	22709847	T	C	ncRNA_intronic	GOLGA8DP	NA	NA	NA	ncRNA_intronic	ENSG00000185182	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs74829243	0.08	0.08	0.046	0.11262	0.0865	0.2123	0.1859	0.0197	0.1104	0.06	0.13	0.13	0.01	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.649029	NA	NA	NA	NA	NA	0.007	NA	4.5801666
1194	19	36900778	36900778	A	C	intronic	ZFP82	NA	NA	NA	intronic	ENSG00000181007	NA	NA	NA	NA	NA	19q13.12	Score=843;Name=V$FOXO1_02	NA	NA	NA	rs2271842	0.15	0.15	0.146	0.136182	0.1988	0.1617	0.2363	0.0129	0.1411	0.21	0.17	0.19	0.02	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.125452	NA	NA	0.221245	0.04841	NA	0.181	NA	4.579955
1194	2	158818797	158818797	A	G	intergenic	ACVR1,UPP2	dist=86423;dist=32894	NA	NA	ncRNA_exonic	ENSG00000228937	NA	NA	NA	Score=636;Name=lod=513	NA	2q24.1	NA	NA	NA	NA	rs11686202	0.41	0.41	0.365	0.440695	0.4205	0.5298	0.6369	0.1324	0.6472	0.4	0.55	0.57	0.16	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.015811	NA	NA	NA	NA	ID=COSN166298;OCCURENCE=8(haematopoietic_and_lymphoid_tissue)	0.507	NA	4.5795
1194	5	25909764	25909764	C	T	intergenic	LOC340107,CDH9	dist=1069072;dist=970945	NA	NA	ncRNA_exonic	ENSG00000251593	NA	NA	NA	Score=721;Name=lod=1130	NA	5p14.1	NA	NA	NA	NA	rs11739167	0.52	0.52	0.523	0.532947	0.4205	0.6101	0.4395	0.6241	0.5123	0.4	0.62	0.47	0.6	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.863039	NA	NA	NA	NA	NA	0.514	NA	4.5795
1194	5	25911136	25911136	C	A	intergenic	LOC340107,CDH9	dist=1070444;dist=969573	NA	NA	ncRNA_exonic	ENSG00000251593	NA	NA	NA	Score=657;Name=lod=625	NA	5p14.1	NA	NA	NA	NA	rs9293194	0.5	0.5	0.527	0.513179	0.4205	0.6121	0.4337	0.5446	0.5204	0.4	0.62	0.46	0.54	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.711071	NA	NA	NA	NA	NA	0.478	NA	4.5795
1194	5	151230362	151230362	A	T	intronic	GLRA1	NA	NA	NA	intronic	ENSG00000145888	NA	NA	NA	Score=802;Name=lod=2417	NA	5q33.1	NA	NA	NA	NA	rs6896518	0.41	0.41	0.369	0.451078	0.4205	0.3304	0.4035	0.5719	0.4775	0.43	0.3	0.37	0.55	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.010977	NA	NA	NA	NA	NA	0.428	NA	4.5795
1194	9	32466184	32466184	G	A	intronic	DDX58	NA	NA	NA	intronic	ENSG00000107201	NA	NA	NA	Score=265;Name=lod=16	NA	9p21.1	NA	NA	NA	NA	rs2274864	0.3	0.3	0.253	0.326677	0.4205	0.2063	0.3588	0.2322	0.4591	0.41	0.17	0.34	0.24	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.843453	NA	NA	NA	NA	NA	0.341	NA	4.5795
1194	14	22616554	22616554	C	A	intergenic	OR4E2,DAD1	dist=482316;dist=417253	NA	NA	exonic	ENSG00000211809	NA	nonsynonymous SNV	ENSG00000211809:ENST00000390457:exon2:c.C295A:p.P99T	NA	NA	14q11.2	NA	NA	NA	NA	rs34355797	0.08	0.08	0.092	0.0902556	0.0855	NA	0.062	0.2171	0.0368	0.07	NA	0.07	0.22	0.0766	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.719381	NA	0.54	0.092052	0.183857	NA	0.167	NA	4.5791814
1194	13	39446869	39446869	G	A	intronic	FREM2	NA	NA	NA	intronic	ENSG00000150893	NA	NA	NA	NA	NA	13q13.3	NA	Name=CTCF	NA	NA	rs9532295	0.18	0.18	0.162	0.200679	0.1163	0.0972	0.3314	0.3192	0.1411	0.1	0.11	0.28	0.32	0.172	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.210313	NA	NA	0.132558	0.296868	NA	0.174	NA	4.579142
1194	2	238255120	238255120	C	T	intronic	COL6A3	NA	NA	NA	intronic	ENSG00000163359	NA	NA	NA	NA	NA	2q37.3	NA	NA	NA	NA	rs2270656	0.18	0.18	0.167	0.202676	0.1481	0.0565	0.2147	0.3949	0.1411	0.14	0.05	0.2	0.37	0.1511	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.620641	NA	NA	0.121744	0.321607	NA	0.159	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000080984.1;CLNDSDB=.;CLNDSDBID=.	4.579056
1194	1	43905819	43905819	T	C	intronic	SZT2	NA	NA	NA	intronic	ENSG00000198198	NA	NA	NA	NA	NA	1p34.2	NA	NA	Name=7	NA	rs2782649	0.27	0.27	0.234	0.20028	0.4215	0.0823	0.379	0.1044	0.0971	0.42	0.08	0.41	0.13	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.378105	NA	NA	NA	NA	NA	0.319	NA	4.5785
1194	10	111647738	111647738	C	T	intronic	XPNPEP1	NA	NA	NA	intronic	ENSG00000108039	NA	NA	NA	NA	NA	10q25.1	NA	NA	Name=2	NA	rs472049	0.36	0.36	0.355	0.330871	0.4215	0.1171	0.3689	0.5144	0.183	0.44	0.12	0.4	0.5	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.696832	NA	NA	NA	NA	NA	0.362	NA	4.5785
1194	22	16871463	16871463	G	A	intergenic	OR11H1,CCT8L2	dist=421659;dist=200185	NA	NA	ncRNA_exonic	ENSG00000225293	NA	NA	NA	Score=660;Name=lod=644	NA	22q11.1	NA	NA	NA	NA	rs62223294	0.41	0.41	0.385	0.371206	0.4215	0.3075	0.3977	0.4213	0.2986	0.45	0.35	0.41	0.43	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.445049	NA	NA	NA	NA	NA	0.246	NA	4.5785
1194	20	57268867	57268867	C	A	exonic	NPEPL1	NA	synonymous SNV	NPEPL1:NM_024663:exon2:c.C225A:p.T75T,NPEPL1:NM_001204872:exon3:c.C141A:p.T47T,NPEPL1:NM_001204873:exon3:c.C81A:p.T27T	exonic	ENSG00000215440	NA	synonymous SNV	ENSG00000215440:ENST00000356091:exon2:c.C225A:p.T75T,ENSG00000215440:ENST00000525817:exon3:c.C81A:p.T27T,ENSG00000215440:ENST00000525967:exon3:c.C141A:p.T47T	NA	NA	20q13.32	NA	NA	NA	NA	rs3746396	0.35	0.35	0.327	0.29992	0.3429	0.376	0.2983	0.1982	0.316	0.37	0.43	0.32	0.22	0.3531	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.306876	1.306876	NA	0.392339	0.220518	NA	0.319	NA	4.5783276
1194	13	111156153	111156153	G	A	ncRNA_intronic	COL4A2-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000232814	NA	NA	NA	NA	NA	13q34	NA	Name=Pol2,EBF,ERalpha_a	NA	NA	rs9301460	0.34	0.34	0.35	0.359625	0.3718	0.2341	0.3012	0.4455	0.4018	0.36	0.22	0.3	0.47	0.3541	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.301041	NA	NA	0.362458	0.44258	NA	0.457	NA	4.5783086
1194	4	123536963	123536963	G	A	exonic	IL21	NA	synonymous SNV	IL21:NM_001207006:exon3:c.C234T:p.C78C,IL21:NM_021803:exon3:c.C234T:p.C78C	exonic	ENSG00000138684	NA	synonymous SNV	ENSG00000138684:ENST00000264497:exon3:c.C234T:p.C78C	Score=419;Name=lod=67	NA	4q27	NA	NA	NA	NA	rs4833837	0.8	0.8	0.812	0.840455	0.6581	0.8869	0.817	0.9531	0.8446	0.66	0.88	0.79	0.95	0.7434	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.92885	NA	NA	0.687093	0.918066	NA	0.783	NA	4.5780736
1194	1	19566296	19566296	T	C	intronic	EMC1	NA	NA	NA	ncRNA_intronic	ENSG00000230424	NA	NA	NA	NA	NA	1p36.13	NA	Name=MafK_(SC-477),MafK_(ab50322)	NA	NA	rs2273046	0.42	0.42	0.41	0.42472	0.2237	0.6806	0.4395	0.438	0.3395	0.21	0.71	0.39	0.43	0.3122	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.669816	NA	NA	0.219535	0.407172	NA	0.29	NA	4.5778983
1194	4	42032024	42032024	A	G	intronic	SLC30A9	NA	NA	NA	ncRNA_exonic	ENSG00000249212	NA	NA	NA	Score=606;Name=lod=387	NA	4p13	NA	NA	NA	NA	rs4861155	0.66	0.66	0.609	0.622604	0.7555	0.9484	0.7695	0.0847	0.773	0.77	0.95	0.76	0.09	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.249023	NA	NA	NA	NA	NA	0.5	NA	4.5778333
1194	17	7533423	7533423	G	A	upstream	SHBG	NA	NA	NA	intronic	ENSG00000129214	NA	NA	NA	NA	NA	17p13.1	NA	Name=SP1,HNF4G_(SC-6558),RXRA,p300,HNF4A_(H-171),HDAC2_(SC-6296),Egr-1	NA	NA	rs1799941	0.12	0.12	0.11	0.0988419	0.2555	0.001	0.1499	0.0393	0.0828	0.24	0.0017	0.18	0.05	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.129675	NA	NA	NA	NA	NA	0.08	NA	4.5778333
1194	2	198508951	198508951	G	A	exonic	RFTN2	NA	synonymous SNV	RFTN2:NM_144629:exon3:c.C369T:p.L123L	exonic	ENSG00000162944	NA	synonymous SNV	ENSG00000162944:ENST00000295049:exon3:c.C369T:p.L123L	Score=501;Name=lod=145	NA	2q33.1	NA	NA	NA	NA	rs10497806	0.68	0.68	0.733	0.680711	0.7376	0.4603	0.6167	0.8676	0.6421	0.73	0.48	0.64	0.86	0.66	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.212615	NA	NA	0.691279	0.833409	NA	0.688	NA	4.5777876
1194	1	211380770	211380770	T	C	intergenic	KCNH1,RCOR3	dist=73313;dist=51938	NA	NA	ncRNA_exonic	ENSG00000226986	NA	NA	NA	Score=680;Name=lod=771	NA	1q32.2	NA	NA	NA	NA	rs7525401	0.5	0.5	0.499	0.544129	0.4225	0.3919	0.4294	0.8411	0.5061	0.41	0.38	0.4	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.383228	NA	NA	NA	NA	ID=COSN163430;OCCURENCE=1(breast)	0.471	NA	4.5775
1194	5	169435396	169435396	G	T	intronic	DOCK2	NA	NA	NA	intronic	ENSG00000134516	NA	NA	NA	Score=492;Name=lod=133	NA	5q35.1	NA	NA	NA	NA	rs2287726	0.34	0.34	0.34	0.340655	0.4225	0.2063	0.3905	0.382	0.3037	0.4	0.21	0.37	0.38	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.828018	2.828018	NA	NA	NA	NA	0.217	NA	4.5775
1194	7	9766149	9766149	G	A	intergenic	PER4,NDUFA4	dist=90702;dist=1205431	NA	NA	ncRNA_exonic	ENSG00000197320	NA	NA	NA	Score=737;Name=lod=1316	NA	7p21.3	NA	NA	NA	NA	rs62445676	0.35	0.35	0.33	0.322684	0.4225	0.3244	0.4063	0.2239	0.2924	0.42	0.34	0.39	0.21	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.49713	NA	NA	NA	NA	NA	0.297	NA	4.5775
1194	14	20813672	20813672	A	G	intronic	PARP2	NA	NA	NA	ncRNA_intronic	ENSG00000254846	NA	NA	NA	NA	NA	14q11.2	NA	Name=MafK_(ab50322)	NA	NA	rs3093890	0.18	0.18	0.143	0.205471	0.2565	0.1845	0.1988	0.0446	0.3967	0.25	0.18	0.2	0.06	0.246	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.198822	2.198822	NA	0.254144	0.08001	NA	0.196	NA	4.5766893
1194	1	59465725	59465725	G	A	intergenic	LOC100131060,HSD52	dist=100341;dist=131883	NA	NA	ncRNA_exonic	ENSG00000228121	NA	NA	NA	Score=738;Name=lod=1328	NA	1p32.1	NA	NA	NA	NA	rs2716147	0.41	0.41	0.419	0.417732	0.4235	0.2133	0.3847	0.6884	0.2802	0.42	0.2	0.39	0.67	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.388801	NA	NA	NA	NA	NA	0.428	NA	4.5765
1194	1	59465926	59465926	A	C	intergenic	LOC100131060,HSD52	dist=100542;dist=131682	NA	NA	ncRNA_exonic	ENSG00000228121	NA	NA	NA	Score=738;Name=lod=1328	NA	1p32.1	NA	NA	NA	NA	rs2764901	0.41	0.41	0.409	0.417732	0.4235	0.2133	0.3847	0.6884	0.2802	0.42	0.2	0.39	0.67	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.281853	NA	NA	NA	NA	NA	0.428	NA	4.5765
1194	6	39926174	39926174	C	T	intergenic	MOCS1,FLJ41649	dist=23884;dist=385910	NA	NA	ncRNA_exonic	ENSG00000180211	NA	NA	NA	Score=660;Name=lod=643	NA	6p21.2	NA	NA	NA	NA	rs1998391	0.36	0.36	0.309	0.370208	0.4235	0.3899	0.5216	0.118	0.5286	0.42	0.36	0.54	0.13	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.91692	NA	NA	NA	NA	NA	0.239	NA	4.5765
1194	7	65888570	65888570	C	A	intergenic	LINC00174,LOC493754	dist=23175;dist=129983	NA	NA	ncRNA_exonic	ENSG00000231234	NA	NA	NA	Score=766;Name=lod=1732	NA	7q11.21	NA	NA	NA	NA	rs6961990	0.43	0.43	0.37	0.448283	0.4235	0.623	0.4452	0.2572	0.5542	0.42	0.62	0.42	0.23	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.081619	2.081619	NA	NA	NA	NA	0.399	NA	4.5765
1194	18	84841	84841	C	T	intergenic	NONE,ROCK1P1	dist=NONE;dist=24224	NA	NA	ncRNA_exonic	ENSG00000262081	NA	NA	NA	Score=329;Name=lod=29	NA	18p11.32	NA	NA	NA	NA	rs66758167	0.55	0.55	0.522	0.514377	0.4235	0.9474	0.5202	0.3048	0.4407	0.43	0.93	0.49	0.32	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.300229	NA	NA	NA	NA	NA	0.435	NA	4.5765
1194	19	54849463	54849463	C	T	exonic	LILRA4	NA	synonymous SNV	LILRA4:NM_012276:exon4:c.G399A:p.V133V	exonic	ENSG00000239961	NA	synonymous SNV	ENSG00000239961:ENST00000291759:exon4:c.G399A:p.V133V	NA	NA	19q13.42	NA	NA	NA	NA	rs12976217	0.31	0.31	0.293	0.345248	0.3509	0.2361	0.3963	0.3306	0.4356	0.35	0.24	0.37	0.31	0.3718	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.921017	NA	NA	0.368372	0.342714	NA	0.355	NA	4.5755946
1194	1	59465881	59465881	C	G	intergenic	LOC100131060,HSD52	dist=100497;dist=131727	NA	NA	ncRNA_exonic	ENSG00000228121	NA	NA	NA	Score=738;Name=lod=1328	NA	1p32.1	NA	NA	NA	NA	rs2716149	0.43	0.43	0.419	0.441693	0.4245	0.2133	0.3919	0.7761	0.2781	0.42	0.2	0.4	0.73	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.073812	NA	NA	NA	NA	NA	0.442	NA	4.5755
1194	4	139482703	139482703	G	A	intergenic	LINC00499,CCRN4L	dist=137205;dist=454240	NA	NA	ncRNA_exonic	ENSG00000248795	NA	NA	NA	Score=701;Name=lod=943	NA	4q28.3	NA	NA	NA	NA	rs11730882	0.42	0.42	0.424	0.444089	0.4245	0.1925	0.4424	0.6014	0.5123	0.42	0.22	0.46	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.038123	NA	NA	NA	NA	ID=COSN167333;OCCURENCE=1(large_intestine)	0.478	NA	4.5755
1194	19	43439848	43439848	G	A	exonic	PSG7	NA	unknown	UNKNOWN	exonic	ENSG00000221878	NA	unknown	UNKNOWN	NA	NA	19q13.31	NA	NA	NA	NA	rs77964180	0.11	0.11	0.074	0.107428	0.1431	0.003	0.2176	0.0893	0.1247	0.15	0.0017	0.21	0.12	0.1351	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.37886	NA	NA	0.146313	0.120854	NA	0.13	NA	4.575487
1194	2	139429068	139429068	G	A	exonic	NXPH2	NA	synonymous SNV	NXPH2:NM_007226:exon2:c.C219T:p.Y73Y	exonic	ENSG00000144227	NA	synonymous SNV	ENSG00000144227:ENST00000272641:exon2:c.C219T:p.Y73Y	Score=581;Name=lod=306	NA	2q22.1	NA	NA	NA	NA	rs10803570	0.68	0.68	0.682	0.658546	0.7177	0.4474	0.6888	0.8933	0.4765	0.72	0.47	0.72	0.86	0.6719	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.060939	NA	NA	0.701674	0.861184	NA	0.768	NA	4.5753926
1194	5	6651970	6651970	A	G	exonic	SRD5A1	NA	synonymous SNV	SRD5A1:NM_001047:exon2:c.A309G:p.P103P	exonic	ENSG00000145545	NA	synonymous SNV	ENSG00000145545:ENST00000274192:exon2:c.A309G:p.P103P	NA	NA	5p15.31	NA	NA	NA	NA	rs3822430	0.32	0.32	0.291	0.289736	0.3897	0.1587	0.3919	0.3321	0.1922	0.37	0.15	0.43	0.35	0.3274	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.801915	NA	NA	0.374302	0.327054	ID=COSM149787;OCCURENCE=1(stomach)	0.435	NA	4.5752646
1195	1	38411350	38411350	C	T	intronic	INPP5B	NA	NA	NA	intronic	ENSG00000204084	NA	NA	NA	NA	NA	1p34.3	NA	Name=HMGN3,ZBTB7A_(SC-34508)	NA	NA	rs11485595	0.33	0.33	0.323	0.280551	0.4254	0.3155	0.353	0.0726	0.3252	0.46	0.35	0.35	0.1	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.16389	NA	NA	NA	NA	NA	0.377	NA	4.5746
1195	7	65971009	65971009	T	G	intergenic	LINC00174,LOC493754	dist=105614;dist=47544	NA	NA	ncRNA_exonic	ENSG00000179342	NA	NA	NA	NA	NA	7q11.21	NA	NA	Name=15	NA	rs3735148	0.44	0.44	0.394	0.463259	0.4254	0.623	0.4496	0.3003	0.5675	0.42	0.62	0.42	0.27	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.081187	NA	NA	NA	NA	NA	0.42	NA	4.5746
1195	9	117792426	117792426	G	T	intronic	TNC	NA	NA	NA	intronic	ENSG00000041982	NA	NA	NA	NA	NA	9q33.1	NA	NA	Name=3	NA	rs13286441	0.35	0.35	0.364	0.342851	0.4254	0.2351	0.3602	0.3654	0.3262	0.43	0.23	0.34	0.39	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.000205	NA	NA	NA	NA	NA	0.37	NA	4.5746
1195	16	55536687	55536687	A	G	intronic	MMP2	NA	NA	NA	intronic	ENSG00000087245	NA	NA	NA	Score=582;Name=lod=309	NA	16q12.2	NA	Name=TCF4	NA	NA	rs243834	0.48	0.48	0.462	0.48762	0.4672	0.6379	0.428	0.3495	0.5828	0.44	0.64	0.46	0.39	0.4841	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.187735	NA	NA	0.474186	0.382621	ID=COSM148081;OCCURENCE=1(stomach)	0.543	NA	4.574514
1195	19	35614272	35614272	A	G	intronic	FXYD3	NA	NA	NA	intronic	ENSG00000089356	NA	NA	NA	NA	NA	19q13.12	NA	NA	Name=22	NA	rs937088	0.26	0.26	NA	0.38738	0.3946	0.3155	0.3458	0.3328	0.5573	0.32	0.2	0.2	0.28	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.060693	NA	NA	0.031113	0.023844	NA	NA	NA	4.574287
1195	11	5862780	5862780	T	C	exonic	OR52E6	NA	synonymous SNV	OR52E6:NM_001005167:exon1:c.A348G:p.V116V	exonic	ENSG00000205409	NA	synonymous SNV	ENSG00000205409:ENST00000329322:exon1:c.A348G:p.V116V,ENSG00000205409:ENST00000379946:exon2:c.A360G:p.V120V	NA	NA	11p15.4	NA	NA	NA	NA	rs4362172	0.4	0.4	0.401	0.384185	0.3728	0.4603	0.3184	0.3782	0.3722	0.39	0.46	0.33	0.41	0.3694	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.526107	NA	NA	0.350209	0.368015	NA	0.406	NA	4.5742576
1195	11	5863113	5863113	G	A	exonic	OR52E6	NA	synonymous SNV	OR52E6:NM_001005167:exon1:c.C15T:p.N5N	exonic	ENSG00000205409	NA	synonymous SNV	ENSG00000205409:ENST00000329322:exon1:c.C15T:p.N5N,ENSG00000205409:ENST00000379946:exon2:c.C27T:p.N9N	NA	NA	11p15.4	NA	NA	NA	NA	rs10742810	0.4	0.4	0.404	0.384185	0.3728	0.4593	0.3184	0.379	0.3722	0.39	0.46	0.33	0.41	0.3701	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.065326	NA	NA	0.349778	0.360932	ID=COSM429318;OCCURENCE=1(breast)	0.406	NA	4.5739886
1195	19	18234005	18234005	G	A	intronic	MAST3	NA	NA	NA	intronic	ENSG00000099308	NA	NA	NA	NA	NA	19p13.11	NA	NA	Name=18	NA	rs12611216	0.11	0.11	0.112	0.0888578	0.1531	0.1458	0.1254	0.0121	0.0419	0.16	0.12	0.12	0.02	0.1275	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.601494	NA	NA	0.145431	0.027103	NA	0.065	NA	4.573969
1195	5	6652009	6652009	G	A	exonic	SRD5A1	NA	synonymous SNV	SRD5A1:NM_001047:exon2:c.G348A:p.A116A	exonic	ENSG00000145545	NA	synonymous SNV	ENSG00000145545:ENST00000274192:exon2:c.G348A:p.A116A	NA	NA	5p15.31	NA	NA	NA	NA	rs8192186	0.32	0.32	0.299	0.292133	0.3897	0.1587	0.3919	0.3328	0.2035	0.37	0.15	0.43	0.35	0.3289	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.234911	NA	NA	0.374302	0.327054	ID=COSM149788;OCCURENCE=1(stomach)	0.428	NA	4.5737646
1195	21	35275955	35275955	G	A	intronic	ATP5O	NA	NA	NA	exonic	ENSG00000241837	NA	unknown	UNKNOWN	NA	NA	21q22.11	NA	Name=CTCF_(SC-5916)	NA	NA	rs9980730	0.99	0.99	0.987	0.991014	0.9751	1	0.9885	0.9992	0.9888	0.98	1	0.99	1	0.9811	1	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-1.010	T	0.000	T	.	-1.291	0.039	2.38	0.334	0.134	5.920	-1.291147	NA	NA	0.970116	0.992283	NA	0.993	NA	4.573684
1195	2	212163763	212163763	T	A	intergenic	CPS1,ERBB4	dist=619932;dist=76679	NA	NA	ncRNA_exonic	ENSG00000231017	NA	NA	NA	Score=668;Name=lod=691	NA	2q34	NA	NA	NA	NA	rs17692845	0.3	0.3	0.291	0.3123	0.4264	0.3502	0.2637	0.0779	0.5072	0.44	0.33	0.28	0.08	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.315367	NA	NA	NA	NA	NA	0.261	NA	4.5736
1195	10	50863083	50863083	A	C	intronic	CHAT	NA	NA	NA	intronic	ENSG00000070748	NA	NA	NA	NA	NA	10q11.23	NA	NA	Name=2	NA	rs12264845	0.45	0.45	0.448	0.465655	0.4264	0.7212	0.3559	0.2867	0.5624	0.43	0.66	0.41	0.28	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.94779	NA	NA	NA	NA	NA	0.449	NA	4.5736
1195	12	133360964	133360964	G	A	intronic	GOLGA3	NA	NA	NA	intronic	ENSG00000090615	NA	NA	NA	NA	NA	12q24.33	NA	NA	Name=6	NA	rs1009320	0.5	0.5	0.502	0.493011	0.4264	0.629	0.5476	0.4372	0.4581	0.44	0.62	0.54	0.45	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.871915	NA	NA	NA	NA	NA	0.283	NA	4.5736
1195	19	8839559	8839559	G	A	intergenic	ACTL9,OR2Z1	dist=30387;dist=1832	NA	NA	ncRNA_exonic	ENSG00000269244	NA	NA	NA	Score=731;Name=lod=1241	NA	19p13.2	NA	NA	NA	NA	rs36241	0.26	0.26	0.252	0.209665	0.4264	0.1071	0.2968	0.1082	0.1677	0.43	0.12	0.32	0.11	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.260133	NA	NA	NA	NA	NA	0.246	NA	4.5736
1195	10	20436875	20436875	G	A	intronic	PLXDC2	NA	NA	NA	intronic	ENSG00000120594	NA	NA	NA	NA	NA	10p12.31	NA	NA	Name=5	NA	rs11815026	0.27	0.27	0.27	0.26258	0.1282	0.379	0.1772	0.4274	0.1186	0.14	0.4	0.14	0.43	0.176	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.543028	NA	NA	0.122326	0.38788	NA	0.174	NA	4.573474
1195	1	226573364	226573364	A	G	exonic	PARP1	NA	synonymous SNV	PARP1:NM_001618:exon7:c.T852C:p.A284A	exonic	ENSG00000143799	NA	synonymous SNV	ENSG00000143799:ENST00000366794:exon7:c.T852C:p.A284A	NA	NA	1q42.12	NA	NA	NA	NA	rs1805414	0.54	0.54	0.5	0.516573	0.329	0.7946	0.5029	0.5582	0.3763	0.35	0.8	0.48	0.56	0.4228	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.471364	NA	NA	0.341512	0.536995	NA	0.558	NA	4.5733546
1195	7	9767511	9767511	C	A	intergenic	PER4,NDUFA4	dist=92064;dist=1204069	NA	NA	ncRNA_exonic	ENSG00000197320	NA	NA	NA	Score=808;Name=lod=2568	NA	7p21.3	NA	NA	NA	NA	rs498336	0.41	0.41	0.404	0.395168	0.4274	0.374	0.4352	0.4281	0.3108	0.42	0.38	0.43	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.392846	NA	NA	NA	NA	NA	0.486	NA	4.5726
1195	8	145000898	145000898	A	G	intronic	PLEC	NA	NA	NA	intronic	ENSG00000178209	NA	NA	NA	NA	NA	8q24.3	NA	NA	Name=4	NA	rs56401829	0.25	0.25	0.249	0.230831	0.4274	0.1429	0.2954	0.028	0.3476	0.42	0.16	0.3	0.03	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.580535	NA	NA	NA	NA	NA	0.283	NA	4.5726
1195	5	127640783	127640783	G	A	intronic	FBN2	NA	NA	NA	intronic	ENSG00000138829	NA	NA	NA	NA	NA	5q23.3	NA	NA	Name=31	NA	rs27713	0.74	0.74	NA	0.734425	0.7018	0.8433	0.7133	0.6694	0.7587	0.72	0.85	0.69	0.7	0.7258	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.918249	NA	NA	NA	NA	NA	0.543	CLINSIG=probable-non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000117024.2|RCV000125064.1;CLNDSDB=.|.;CLNDSDBID=.|.	4.5724
1195	3	49723274	49723274	G	A	intronic	MST1	NA	NA	NA	intronic	ENSG00000173531	NA	NA	NA	NA	NA	3p21.31	NA	NA	Name=3	NA	rs75193211	NA	NA	0.297	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4278	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.176983	NA	NA	NA	NA	NA	NA	NA	4.5722
1195	11	47689343	47689343	C	T	intronic	AGBL2	NA	NA	NA	intronic	ENSG00000165923	NA	NA	NA	NA	NA	11p11.2	NA	NA	Name=9	NA	rs10742817	0.33	0.33	0.32	0.350639	0.4284	0.4306	0.3213	0.112	0.5317	0.42	0.35	0.34	0.15	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.16648	NA	NA	NA	NA	NA	0.297	NA	4.5716
1195	17	10542471	10542471	T	G	exonic	MYH3	NA	synonymous SNV	MYH3:NM_002470:exon25:c.A3138C:p.R1046R	exonic	ENSG00000109063	NA	synonymous SNV	ENSG00000109063:ENST00000226209:exon24:c.A3138C:p.R1046R,ENSG00000109063:ENST00000583535:exon25:c.A3138C:p.R1046R	NA	NA	17p13.1	NA	NA	NA	NA	rs2285475	0.5	0.5	0.489	0.466454	0.7584	0.3839	0.5346	0.2398	0.5092	0.74	0.37	0.52	0.27	0.6085	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.259221	NA	NA	0.728256	0.295506	NA	0.616	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117668.1;CLNDSDB=.;CLNDSDBID=.	4.5715106
1195	19	33635761	33635761	C	T	exonic	WDR88	NA	synonymous SNV	WDR88:NM_173479:exon3:c.C399T:p.D133D	exonic	ENSG00000166359	NA	synonymous SNV	ENSG00000166359:ENST00000355868:exon3:c.C399T:p.D133D,ENSG00000166359:ENST00000361680:exon3:c.C399T:p.D133D,ENSG00000166359:ENST00000592765:exon4:c.C399T:p.D133D	NA	NA	19q13.11	NA	NA	NA	NA	rs3848596	0.45	0.45	0.446	0.511182	0.3241	0.5258	0.5692	0.4932	0.6718	0.32	0.54	0.51	0.49	0.4337	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.019272	NA	NA	0.337558	0.478665	NA	0.428	NA	4.5713086
1195	6	29713429	29713429	C	T	ncRNA_intronic	HLA-F-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000214922	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs2076174	0.17	0.17	0.163	0.195288	0.0954	0.2827	0.1009	0.2239	0.2362	0.09	0.27	0.09	0.22	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.084585	NA	NA	NA	NA	NA	0.188	NA	4.5712666
1195	6	29976499	29976499	C	G	ncRNA_intronic	HLA-J,ZNRD1-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000204622,ENSG00000204623	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs9261111	0.18	0.18	0.199	0.191294	0.0954	0.1905	0.1744	0.2988	0.1575	0.09	0.2	0.2	0.3	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.796776	NA	NA	NA	NA	NA	0.167	NA	4.5712666
1195	6	29999941	29999941	T	C	ncRNA_intronic	ZNRD1-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000204623,ENSG00000232757	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs2394257	0.18	0.18	0.139	0.191693	0.0954	0.1905	0.1758	0.2988	0.1585	0.09	0.19	0.2	0.28	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.086055	NA	NA	NA	NA	NA	0.029	NA	4.5712666
1195	6	30000201	30000201	G	A	ncRNA_intronic	ZNRD1-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000204623,ENSG00000232757	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs9261188	0.18	0.18	0.166	0.191094	0.0954	0.1905	0.1729	0.2988	0.1575	0.09	0.2	0.2	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.835407	NA	NA	NA	NA	NA	0.167	NA	4.5712666
1195	15	33304954	33304954	C	T	intronic	FMN1	NA	NA	NA	ncRNA_exonic	ENSG00000259686	NA	NA	NA	Score=289;Name=lod=20	NA	15q13.3	NA	NA	NA	NA	rs345825	0.67	0.67	0.633	0.63778	0.7624	0.8512	0.7622	0.2337	0.7474	0.77	0.84	0.76	0.26	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.38935	NA	NA	NA	NA	NA	0.645	NA	4.5709333
1195	21	46096231	46096231	A	G	intronic	TSPEAR	NA	NA	NA	ncRNA_exonic	ENSG00000229880	NA	NA	NA	Score=474;Name=lod=113	NA	21q22.3	NA	NA	NA	NA	rs2838623	0.75	0.75	0.739	0.768371	0.7624	0.6617	0.7507	0.8427	0.7965	0.76	0.63	0.77	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.280942	NA	NA	NA	NA	NA	0.696	NA	4.5709333
1195	21	46096657	46096657	G	C	intronic	TSPEAR	NA	NA	NA	ncRNA_exonic	ENSG00000229880	NA	NA	NA	Score=674;Name=lod=730	NA	21q22.3	NA	NA	NA	NA	rs2838624	0.76	0.76	0.754	0.779752	0.7624	0.6607	0.7522	0.8865	0.7955	0.76	0.63	0.77	0.88	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.452906	NA	NA	NA	NA	NA	0.703	NA	4.5709333
1195	21	46096731	46096731	A	G	intronic	TSPEAR	NA	NA	NA	ncRNA_exonic	ENSG00000229880	NA	NA	NA	Score=666;Name=lod=681	NA	21q22.3	NA	NA	NA	NA	rs2838625	0.77	0.77	0.763	0.786941	0.7624	0.6627	0.7507	0.9123	0.7965	0.76	0.63	0.77	0.92	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.458666	NA	NA	NA	NA	NA	0.703	NA	4.5709333
1195	17	10543463	10543463	T	C	exonic	MYH3	NA	synonymous SNV	MYH3:NM_002470:exon22:c.A2532G:p.A844A	exonic	ENSG00000109063	NA	synonymous SNV	ENSG00000109063:ENST00000226209:exon21:c.A2532G:p.A844A,ENSG00000109063:ENST00000583535:exon22:c.A2532G:p.A844A	NA	NA	17p13.1	NA	NA	NA	NA	rs2285469	0.5	0.5	0.487	0.466454	0.7584	0.3839	0.5346	0.2398	0.5092	0.74	0.37	0.52	0.27	0.6085	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.277658	NA	NA	0.728837	0.295506	NA	0.616	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117662.1;CLNDSDB=.;CLNDSDBID=.	4.5709296
1195	13	50466815	50466815	C	T	ncRNA_exonic	CTAGE10P	NA	NA	NA	ncRNA_exonic	ENSG00000181358	NA	NA	NA	NA	NA	13q14.2	NA	NA	NA	NA	rs56215346	0.08	0.08	0.053	NA	NA	NA	NA	NA	NA	0.12	0.0017	0.12	0.06	0.0959	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.471783	NA	NA	NA	NA	NA	0.043	NA	4.5707666
1195	17	45887951	45887951	G	T	intronic	OSBPL7	NA	NA	NA	intronic	ENSG00000006025	NA	NA	NA	NA	NA	17q21.32	NA	Name=NRSF,GATA-1,EBF,TAL1_(SC-12984)	Name=128	NA	rs2074189	0.44	0.44	0.458	0.408546	0.4801	0.2817	0.4078	0.444	0.4182	0.48	0.32	0.47	0.48	0.451	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.045804	NA	NA	0.49814	0.440309	NA	0.449	NA	4.57076
1195	17	10536018	10536018	G	A	exonic	MYH3	NA	synonymous SNV	MYH3:NM_002470:exon34:c.C4731T:p.I1577I	exonic	ENSG00000109063	NA	synonymous SNV	ENSG00000109063:ENST00000226209:exon33:c.C4731T:p.I1577I,ENSG00000109063:ENST00000583535:exon34:c.C4731T:p.I1577I	NA	NA	17p13.1	NA	NA	NA	NA	rs2285479	0.51	0.51	0.494	0.469649	0.7584	0.3849	0.5346	0.2504	0.5102	0.74	0.37	0.52	0.29	0.6089	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.083489	NA	NA	0.728721	0.300953	NA	0.616	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117675.1;CLNDSDB=.;CLNDSDBID=.	4.5706456
1195	4	2178108	2178108	C	T	intronic	POLN	NA	NA	NA	intronic	ENSG00000130997	NA	NA	NA	NA	NA	4p16.3	NA	NA	Name=3	NA	rs6599411	0.31	0.31	0.309	0.321885	0.1243	0.373	0.2435	0.5703	0.1922	0.13	0.37	0.25	0.57	0.1896	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.097093	NA	NA	0.115698	0.504312	NA	0.377	NA	4.570402
1195	19	41808432	41808432	A	T	intronic	HNRNPUL1	NA	NA	NA	intronic	ENSG00000105323,ENSG00000105329	NA	NA	NA	NA	NA	19q13.2	NA	Name=NFKB	NA	NA	rs11881940	0.17	0.17	0.144	0.138179	0.171	0.2748	0.1311	0.0673	0.0644	0.16	0.27	0.16	0.06	0.2586	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.650563	NA	NA	NA	NA	NA	0.13	NA	4.5704
1195	19	35616087	35616087	G	A	UTR3	LGI4	NM_139284:c.*10C>T	NA	NA	UTR3	ENSG00000153902	ENST00000392225:c.*216C>T,ENST00000310123:c.*10C>T,ENST00000587780:c.*985C>T	NA	NA	NA	NA	19q13.12	NA	Name=Pol2	NA	NA	rs3826989	0.25	0.25	0.198	0.207867	0.2455	0.2788	0.4107	0.0741	0.1329	0.25	0.33	0.37	0.08	0.265	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.498016	NA	NA	0.252558	0.109396	NA	0.239	NA	4.5702754
1195	11	71510521	71510521	G	A	ncRNA_intronic	ALG1L9P	NA	NA	NA	ncRNA_intronic	ENSG00000248671	NA	NA	NA	NA	NA	11q13.4	NA	NA	NA	NA	rs138217605	0.04	0.04	0.037	0.0295527	0.0964	NA	0.0447	0.0045	0.0143	0.09	NA	0.03	0.0041	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.784141	NA	NA	NA	NA	NA	0.036	NA	4.5702666
1195	16	56652431	56652431	G	A	ncRNA_intronic	MT1L	NA	NA	NA	ncRNA_intronic	ENSG00000260549	NA	NA	NA	NA	NA	16q12.2	NA	NA	NA	NA	rs2018724	0.05	0.05	0.034	0.063099	0.0964	0.0129	0.0764	0.0159	0.135	0.1	0.0017	0.06	0.01	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.359763	NA	NA	NA	NA	NA	0.094	NA	4.5702666
1195	17	10542765	10542765	A	G	exonic	MYH3	NA	synonymous SNV	MYH3:NM_002470:exon24:c.T2952C:p.S984S	exonic	ENSG00000109063	NA	synonymous SNV	ENSG00000109063:ENST00000226209:exon23:c.T2952C:p.S984S,ENSG00000109063:ENST00000583535:exon24:c.T2952C:p.S984S	NA	NA	17p13.1	NA	NA	NA	NA	rs2285474	0.5	0.5	0.478	0.466454	0.7584	0.3839	0.5346	0.2398	0.5092	0.74	0.37	0.52	0.27	0.6094	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.558774	NA	NA	0.728721	0.295506	NA	0.601	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117665.1;CLNDSDB=.;CLNDSDBID=.	4.5701456
1195	19	17531450	17531450	G	A	intronic	MVB12A	NA	NA	NA	ncRNA_intronic	ENSG00000269481	NA	NA	NA	NA	NA	19p13.11	NA	Name=E2F6_(H-50),Pol2,SMC3_(ab9263),E2F6,Rad21,CTCF,CTCF_(SC-5916),Egr-1,Pol2-4H8,ZNF263,ZBTB7A_(SC-34508),CTCF_(C-20)	Name=52	NA	rs2303680	0.6	0.6	0.611	0.606829	0.5805	0.4385	0.6095	0.7277	0.6421	0.6	0.48	0.6	0.74	0.6029	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.640743	NA	NA	0.579884	0.713799	NA	0.688	NA	4.5700493
1195	3	184573555	184573555	C	T	exonic	VPS8	NA	synonymous SNV	VPS8:NM_001009921:exon13:c.C1092T:p.Y364Y,VPS8:NM_015303:exon13:c.C1086T:p.Y362Y	exonic	ENSG00000156931	NA	synonymous SNV	ENSG00000156931:ENST00000287546:exon13:c.C1092T:p.Y364Y,ENSG00000156931:ENST00000436792:exon13:c.C1086T:p.Y362Y,ENSG00000156931:ENST00000446204:exon13:c.C1086T:p.Y362Y,ENSG00000156931:ENST00000437079:exon14:c.C1092T:p.Y364Y	NA	NA	3q27.2	NA	NA	NA	NA	rs6443999	0.52	0.52	0.517	0.554313	0.3559	0.6587	0.4611	0.6755	0.5532	0.37	0.63	0.48	0.65	0.4146	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.814064	NA	NA	0.326187	0.610005	NA	0.558	NA	4.5699796
1195	7	142231701	142231701	G	T	intergenic	LOC730441,MTRNR2L6	dist=259633;dist=142430	NA	NA	exonic	ENSG00000211717	NA	nonsynonymous SNV	ENSG00000211717:ENST00000390364:exon2:c.C216A:p.H72Q	NA	NA	7q34	NA	NA	Name=2	NA	rs17248	0.63	0.63	0.581	0.586062	0.4016	0.7054	0.5764	0.6195	0.6145	0.5	0.75	0.62	0.71	0.4704	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.014272	NA	0.13	0.392117	0.547091	ID=COSN229380;OCCURENCE=1(skin)	0.587	NA	4.5692164
1195	20	34328848	34328848	C	T	intronic	RBM39	NA	NA	NA	intronic	ENSG00000131051	NA	NA	NA	NA	NA	20q11.22	NA	NA	Name=142	NA	rs2425122	0.17	0.17	0.172	0.195288	0.1402	0.1319	0.1599	0.3321	0.1575	0.13	0.12	0.19	0.27	0.1531	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.86104	NA	NA	0.137505	0.282592	NA	0.145	NA	4.569195
1195	11	64127902	64127902	G	A	intronic	RPS6KA4	NA	NA	NA	intronic	ENSG00000162302	NA	NA	NA	NA	NA	11q13.1	NA	NA	Name=2	NA	rs2289573	0.1	0.1	0.091	0.0888578	0.1362	0.0873	0.1081	0.0227	0.1176	0.14	0.09	0.12	0.03	0.1651	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.519915	NA	NA	0.129599	0.046136	NA	0.051	NA	4.569101
1195	9	16775725	16775725	T	C	intronic	BNC2	NA	NA	NA	ncRNA_exonic	ENSG00000233551	NA	NA	NA	Score=574;Name=lod=286	NA	9p22.2	NA	NA	NA	NA	rs7024466	0.43	0.43	0.408	0.375998	0.7644	0.1438	0.5893	0.149	0.3712	0.77	0.16	0.56	0.13	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.139244	NA	NA	NA	NA	NA	0.348	NA	4.5689333
1195	6	29977068	29977068	G	C	ncRNA_intronic	HLA-J,ZNRD1-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000204622,ENSG00000204623	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs2275853	0.05	0.05	0.044	0.0411342	0.0507	0.0357	0.0403	0.0492	0.0266	0.05	0.04	0.04	0.05	0.0471	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.917364	NA	NA	NA	NA	NA	0.029	NA	4.5688666
1195	6	24653376	24653376	G	A	exonic	TDP2	NA	synonymous SNV	TDP2:NM_016614:exon6:c.C642T:p.N214N	exonic	ENSG00000111802	NA	synonymous SNV	ENSG00000111802:ENST00000341060:exon5:c.C468T:p.N156N,ENSG00000111802:ENST00000378198:exon6:c.C642T:p.N214N,ENSG00000111802:ENST00000545995:exon6:c.C732T:p.N244N	NA	NA	6p22.3	NA	NA	Name=6	NA	rs1129644	0.79	0.79	0.799	0.805112	0.662	0.8661	0.8372	0.9319	0.6953	0.65	0.86	0.82	0.92	0.7393	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.388441	NA	NA	0.696744	0.895824	NA	0.681	NA	4.5686226
1195	10	105957613	105957613	G	A	intronic	WDR96	NA	NA	NA	intronic	ENSG00000197748	NA	NA	NA	NA	NA	10q25.1	NA	Name=CEBPB	NA	NA	rs677904	0.46	0.46	0.484	0.505391	0.4314	0.4018	0.3602	0.7005	0.5276	0.43	0.37	0.38	0.69	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.684669	NA	NA	NA	NA	NA	0.406	NA	4.5686
1195	19	58963018	58963018	C	G	UTR5	ZNF324B	NM_207395:c.-2051C>G	NA	NA	UTR5	ENSG00000249471	ENST00000336614:c.-2051C>G,ENST00000545523:c.-2051C>G,ENST00000599194:c.-2051C>G,ENST00000599193:c.-2051C>G,ENST00000598244:c.-2051C>G,ENST00000391696:c.-3324C>G,ENST00000594214:c.-2051C>G	NA	NA	NA	NA	19q13.43	NA	Name=RFX5_(N-494),HA-E2F1,Sin3Ak-20,Pbx3,c-Fos,Pol2-4H8,USF-1,Nrf1,TBP,IRF1,ZBTB7A_(SC-34508),CCNT2,c-Myc,HEY1,SIX5,Pol2,SP1,Pol2(phosphoS2),TAF1,SREBP1,ETS1,NF-YA,SP2_(SC-643),Znf143_(16618-1-AP),POU2F2,GABP,CHD2_(N-1250),Max,ELF1_(SC-631),NF-YB,Oct-2	NA	NA	rs893187	0.2	0.2	0.183	0.180711	0.2505	0.2659	0.134	0.0772	0.1943	0.26	0.26	0.16	0.08	0.2334	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.475992	NA	NA	0.281015	0.098744	NA	0.152	NA	4.5684184
1195	3	9854913	9854913	C	A	intronic	ARPC4-TTLL3,TTLL3	NA	NA	NA	intronic	ENSG00000214021,ENSG00000241553,ENSG00000250151	NA	NA	NA	NA	NA	3p25.3	NA	Name=Pol2-4H8,BCL3	NA	NA	rs11720113	0.14	0.14	0.131	0.133387	0.1243	0.0486	0.1124	0.2542	0.0818	0.13	0.06	0.13	0.27	0.1472	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.638576	NA	NA	0.160091	0.222468	NA	0.152	NA	4.568409
1195	6	29976857	29976857	G	C	ncRNA_exonic	HLA-J	NA	NA	NA	ncRNA_exonic	ENSG00000204622,ENSG00000204623	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs9261114	0.05	0.05	0.043	0.0413339	0.0507	0.0357	0.0403	0.0499	0.0266	0.05	0.04	0.04	0.05	0.0479	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.601166	NA	0	NA	NA	NA	0.029	NA	4.5680666
1195	9	140508031	140508031	A	G	intronic	ARRDC1	NA	NA	NA	intronic	ENSG00000197070	NA	NA	NA	NA	NA	9q34.3	NA	NA	Name=3	NA	rs34249205	0.15	0.15	0.111	0.154353	0.1312	0.0992	0.3775	0.0983	0.1524	0.14	0.09	0.36	0.1	0.1682	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.895076	NA	NA	0.132907	0.127326	NA	0.181	NA	4.567693
1195	16	632736	632736	T	C	intronic	PIGQ	NA	NA	NA	intronic	ENSG00000007541	NA	NA	NA	NA	NA	16p13.3	NA	Name=CTCF	NA	NA	rs3743903	0.52	0.52	0.471	0.529952	0.4324	0.6379	0.4885	0.472	0.6268	0.46	0.63	0.49	0.51	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.773961	NA	NA	NA	NA	NA	0.464	NA	4.5676
1195	16	632767	632767	A	G	intronic	PIGQ	NA	NA	NA	intronic	ENSG00000007541	NA	NA	NA	NA	NA	16p13.3	NA	Name=CTCF	NA	NA	rs3743904	0.52	0.52	0.474	0.529752	0.4324	0.6399	0.4885	0.469	0.6278	0.45	0.63	0.49	0.51	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.480318	NA	NA	NA	NA	NA	0.384	NA	4.5676
1195	1	44595426	44595426	G	A	exonic	KLF17	NA	synonymous SNV	KLF17:NM_173484:exon2:c.G483A:p.S161S	exonic	ENSG00000171872	NA	synonymous SNV	ENSG00000171872:ENST00000372299:exon2:c.G483A:p.S161S	NA	NA	1p34.1	NA	NA	NA	NA	rs2429050	0.32	0.32	0.312	0.27516	0.3966	0.4236	0.2579	0.0915	0.2577	0.38	0.44	0.29	0.1	0.3302	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.038169	NA	NA	0.372412	0.144803	NA	0.283	NA	4.5674546
1195	12	70953456	70953456	T	C	intronic	PTPRB	NA	NA	NA	intronic	ENSG00000127329	NA	NA	NA	NA	NA	12q15	NA	Name=MafK_(SC-477),MafF_(M8194),MafK_(ab50322)	NA	NA	rs2303962	0.17	0.17	0.171	0.199081	0.2147	0.1339	0.1499	0.1808	0.3098	0.22	0.13	0.14	0.19	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.04328	NA	NA	0.217859	0.167488	NA	0.232	NA	4.567441
1195	19	57901548	57901548	G	T	intronic	ZNF548	NA	NA	NA	intronic	ENSG00000188785,ENSG00000268133,ENSG00000269533	NA	NA	NA	NA	NA	19q13.43	NA	Name=Pol2-4H8,Pol2	NA	NA	rs12460423	0.21	0.21	0.203	0.219449	0.2346	0.0794	0.1888	0.3782	0.1554	0.23	0.08	0.19	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.497883	NA	NA	0.198113	0.337681	NA	0.174	NA	4.567287
1195	6	36930687	36930687	G	A	intronic	PI16	NA	NA	NA	intronic	ENSG00000164530	NA	NA	NA	NA	NA	6p21.2	NA	Name=SRF	NA	NA	rs17624006	0.08	0.08	0.071	0.0682907	0.166	0.005	0.1037	0.0166	0.0777	0.16	0.01	0.09	0.01	0.1199	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.344763	1.344763	NA	0.146977	0.044258	NA	0.116	NA	4.567123
1195	18	52942827	52942827	G	A	intronic	TCF4	NA	NA	NA	intronic	ENSG00000196628	NA	NA	NA	NA	NA	18q21.2	NA	Name=CEBPB,p300,JunD,GATA-2	Name=99	NA	rs1788027	0.54	0.54	0.576	0.570288	0.4831	0.5635	0.353	0.7504	0.5777	0.47	0.58	0.4	0.73	0.4892	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.687905	NA	NA	0.461047	0.674762	NA	0.616	NA	4.566653
1195	2	189092447	189092447	G	A	intergenic	TFPI,GULP1	dist=673228;dist=63949	NA	NA	ncRNA_exonic	ENSG00000213115	NA	NA	NA	Score=713;Name=lod=1050	NA	2q32.1	NA	NA	NA	NA	rs35686501	0.27	0.27	0.276	0.268171	0.4334	0.0794	0.2637	0.2201	0.3609	0.42	0.09	0.3	0.23	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.878462	NA	NA	NA	NA	NA	0.341	NA	4.5666
1195	7	150444233	150444233	T	C	intergenic	GIMAP1-GIMAP5,TMEM176B	dist=3496;dist=44143	NA	NA	ncRNA_exonic	ENSG00000177590	NA	NA	NA	Score=251;Name=lod=14	NA	7q36.1	NA	NA	NA	NA	rs6972271	0.51	0.51	0.488	0.539736	0.4334	0.3671	0.4078	0.8321	0.5256	0.44	0.38	0.43	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.748071	NA	NA	NA	NA	NA	0.609	NA	4.5666
1195	11	118851138	118851138	C	T	intronic	FOXR1	NA	NA	NA	intronic	ENSG00000176302	NA	NA	NA	NA	NA	11q23.3	NA	Name=USF2,TAF1,E2F6,PU.1,Max,ELF1_(SC-631),c-Myc,HEY1,TBP,USF-1	NA	NA	rs4456264	0.38	0.38	0.367	0.398363	0.4334	0.1171	0.5965	0.469	0.4162	0.42	0.11	0.57	0.48	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.367002	NA	NA	NA	NA	NA	0.449	NA	4.5666
1195	15	20555515	20555515	G	T	intergenic	CHEK2P2,HERC2P3	dist=58704;dist=58135	NA	NA	ncRNA_intronic	ENSG00000258654	NA	NA	NA	NA	NA	15q11.1	NA	NA	Name=2	NA	rs12594295	NA	NA	0.337	0.41873	0.4334	0.4157	0.3775	0.4244	0.4284	NA	NA	NA	NA	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.670431	NA	NA	NA	NA	NA	0.37	NA	4.5666
1195	1	94343023	94343023	A	G	exonic	DNTTIP2	NA	synonymous SNV	DNTTIP2:NM_014597:exon2:c.T468C:p.P156P	exonic	ENSG00000067334	NA	synonymous SNV	ENSG00000067334:ENST00000359208:exon2:c.T468C:p.P156P,ENSG00000067334:ENST00000436063:exon2:c.T468C:p.P156P	NA	NA	1p22.1	NA	NA	NA	NA	rs2391322	0.41	0.41	0.408	0.436901	0.3499	0.5585	0.3718	0.3782	0.5266	0.35	0.57	0.37	0.34	0.3931	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.375345	NA	NA	0.35723	0.380524	NA	0.5	NA	4.5664366
1195	2	86712820	86712820	A	T	intronic	KDM3A	NA	NA	NA	intronic	ENSG00000115548	NA	NA	NA	NA	NA	2p11.2	NA	Name=FOXA1_(C-20)	NA	NA	rs72932311	0.14	0.14	0.142	0.132188	0.1392	NA	0.0865	0.3328	0.0225	0.14	NA	0.09	0.34	0.1316	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.143001	NA	NA	0.162907	0.308443	NA	0.196	NA	4.566293
1195	22	31529463	31529463	C	A	exonic	INPP5J	NA	synonymous SNV	INPP5J:NM_001002837:exon11:c.C1299A:p.T433T	exonic	ENSG00000185133	NA	synonymous SNV	ENSG00000185133:ENST00000401755:exon4:c.C498A:p.T166T,ENSG00000185133:ENST00000404453:exon5:c.C498A:p.T166T,ENSG00000185133:ENST00000331075:exon11:c.C2403A:p.T801T,ENSG00000185133:ENST00000404390:exon11:c.C1299A:p.T433T,ENSG00000185133:ENST00000400294:exon12:c.C1302A:p.T434T,ENSG00000185133:ENST00000412277:exon12:c.C2202A:p.T734T,ENSG00000185133:ENST00000405300:exon13:c.C1302A:p.T434T	NA	NA	22q12.2	NA	NA	NA	NA	rs35342535	0.23	0.23	0.236	0.259784	0.3877	0.0208	0.281	0.1906	0.453	0.37	0.01	0.31	0.22	0.3261	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.387396	NA	NA	0.386697	0.211353	NA	0.239	NA	4.5661696
1195	10	24833137	24833137	C	T	exonic	KIAA1217	NA	synonymous SNV	KIAA1217:NM_019590:exon19:c.C4938T:p.I1646I	exonic	ENSG00000120549	NA	synonymous SNV	ENSG00000120549:ENST00000376451:exon14:c.C3987T:p.I1329I,ENSG00000120549:ENST00000376454:exon19:c.C4938T:p.I1646I	NA	NA	10p12.1	NA	NA	NA	NA	rs2250411	0.27	0.27	0.254	0.261182	0.3956	0.1419	0.3141	0.2542	0.2178	0.4	0.12	0.34	0.21	0.3214	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.624588	NA	NA	0.383721	0.275306	NA	0.188	NA	4.5659456
1195	1	11129848	11129848	A	G	intronic	EXOSC10	NA	NA	NA	ncRNA_intronic	ENSG00000226849	NA	NA	NA	NA	NA	1p36.22	NA	NA	Name=5	NA	rs2791653	0.73	0.73	0.683	0.726438	0.7674	0.9415	0.8314	0.3699	0.8701	0.77	0.93	0.82	0.38	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.012367	NA	NA	NA	NA	NA	0.725	NA	4.5659333
1195	19	43439739	43439739	T	C	exonic	PSG7	NA	unknown	UNKNOWN	exonic	ENSG00000221878	NA	unknown	UNKNOWN	NA	NA	19q13.31	NA	NA	NA	NA	rs58684857	0.15	0.15	0.129	0.13738	0.1431	0.0109	0.2277	0.1906	0.1258	0.15	0.01	0.22	0.24	0.1442	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-3.002379	NA	NA	0.147093	0.214675	NA	0.196	NA	4.565607
1195	6	133135807	133135807	C	T	intronic	RPS12	NA	NA	NA	intronic	ENSG00000112306	NA	NA	NA	NA	NA	6q23.2	NA	Name=p300_(N-15),GTF2B,TBP,GTF2F1_(RAP-74),c-Myc,NFKB,BCL3,ZEB1_(SC-25388),HEY1,ELF1_(SC-631),PAX5-N19,HNF4G_(SC-6558),PAX5-C20,Oct-2,NRSF,Pol2,NELFe,MEF2C_(SC-13268),Egr-1,YY1,Pol2(phosphoS2),BCL11A,BCLAF1_(M33-P5B11),TAF7_(SQ-8),Sin3Ak-20,YY1_(C-20),Pol2-4H8,ETS1,Pol2(b),GATA-1,TAF1,POU2F2,ZBTB33	NA	NA	rs9493450	0.51	0.51	0.531	0.548722	0.4344	0.3125	0.634	0.7791	0.5378	0.43	0.31	0.64	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.062886	NA	NA	NA	NA	NA	0.493	NA	4.5656
1195	11	293188	293188	T	C	exonic	ATHL1	NA	synonymous SNV	ATHL1:NM_025092:exon8:c.T1296C:p.H432H	exonic	ENSG00000142102	NA	synonymous SNV	ENSG00000142102:ENST00000409479:exon7:c.T1377C:p.H459H,ENSG00000142102:ENST00000409548:exon8:c.T1296C:p.H432H,ENSG00000142102:ENST00000409655:exon8:c.T765C:p.H255H	NA	NA	11p15.5	NA	NA	NA	NA	rs12801980	0.37	0.37	0.368	0.400759	0.3668	0.3998	0.3718	0.3585	0.5143	0.37	0.42	0.38	0.32	0.3893	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.27669	NA	NA	0.345233	0.325465	NA	0.304	NA	4.5653336
1195	19	55221819	55221819	A	G	ncRNA_exonic	LILRP2	NA	NA	NA	ncRNA_intronic	ENSG00000170858,ENSG00000240258	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs45581836	0.1	0.1	0.039	0.119409	0.1014	0.1567	0.1455	0.1067	0.0982	0.09	0.11	0.11	0.08	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.120052	NA	NA	NA	NA	NA	0.036	NA	4.5652666
1195	1	40097136	40097136	T	C	intronic	HEYL	NA	NA	NA	intronic	ENSG00000163909	NA	NA	NA	NA	NA	1p34.3	NA	NA	Name=8	NA	rs11206504	0.13	0.13	0.101	0.0992412	0.1441	0.1706	0.1441	0.0197	0.0552	0.16	0.18	0.13	0.02	0.1345	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.069911	NA	NA	0.156279	0.047435	NA	0.138	NA	4.565121
1195	20	61296268	61296268	A	G	ncRNA_intronic	LOC100127888	NA	NA	NA	ncRNA_intronic	ENSG00000232803	NA	NA	NA	NA	NA	20q13.33	NA	NA	NA	NA	rs2277774	0.04	0.04	0.025	0.0353435	0.0537	0.0724	0.0317	0.0053	0.0215	0.06	0.08	0.03	0.0041	0.0005	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.205511	NA	NA	0.047442	0.012256	NA	0.022	NA	4.5650246
1196	3	1262474	1262474	T	C	exonic	CNTN6	NA	synonymous SNV	CNTN6:NM_014461:exon3:c.T159C:p.N53N	exonic	ENSG00000134115	NA	synonymous SNV	ENSG00000134115:ENST00000350110:exon3:c.T159C:p.N53N,ENSG00000134115:ENST00000446702:exon3:c.T159C:p.N53N	NA	NA	3p26.3	NA	NA	NA	NA	rs2013828	0.43	0.43	0.429	0.470048	0.3419	0.5119	0.4813	0.466	0.5562	0.35	0.49	0.46	0.48	0.4082	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.054495	NA	NA	0.351628	0.439855	NA	0.428	NA	4.5649386
1196	22	45789743	45789743	T	G	intronic	SMC1B	NA	NA	NA	intronic	ENSG00000077935	NA	NA	NA	NA	NA	22q13.31	NA	Name=CTCF	NA	NA	rs136604	0.12	0.12	0.112	0.154952	0.1243	0.1667	0.1398	0.1006	0.2587	0.11	0.14	0.14	0.09	0.1917	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.468938	2.468938	NA	0.119165	0.09516	NA	0.268	NA	4.564835
1196	2	44209477	44209477	C	T	exonic	LRPPRC	NA	synonymous SNV	LRPPRC:NM_133259:exon2:c.G246A:p.Q82Q	exonic	ENSG00000138095	NA	synonymous SNV	ENSG00000138095:ENST00000260665:exon2:c.G246A:p.Q82Q,ENSG00000138095:ENST00000409659:exon2:c.G246A:p.Q82Q,ENSG00000138095:ENST00000409946:exon2:c.G246A:p.Q82Q,ENSG00000138095:ENST00000447246:exon2:c.G168A:p.Q56Q	NA	NA	2p21	NA	NA	NA	NA	rs6741066	0.52	0.52	0.498	0.503994	0.7416	0.0367	0.5548	0.68	0.4673	0.75	0.04	0.62	0.65	0.624	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.033734	NA	NA	0.736334	0.700862	ID=COSM1408165;OCCURENCE=1(large_intestine)	0.601	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117556.2;CLNDSDB=.;CLNDSDBID=.	4.5647326
1196	14	52229904	52229904	C	T	intergenic	FRMD6,GNG2	dist=32460;dist=97118	NA	NA	ncRNA_exonic	ENSG00000258550	NA	NA	NA	Score=439;Name=lod=81	NA	14q22.1	NA	NA	NA	NA	rs57839902	0.46	0.46	0.478	0.4373	0.4354	0.5694	0.4899	0.3585	0.3722	0.41	0.61	0.48	0.36	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.389876	NA	NA	NA	NA	NA	0.341	NA	4.5646
1196	1	21935433	21935433	G	T	intronic	RAP1GAP	NA	NA	NA	intronic	ENSG00000076864	NA	NA	NA	NA	NA	1p36.12	NA	Name=eGFP-JunD,NRSF,PU.1,TAL1_(SC-12984),MafF_(M8194),Pol2(b),MafK_(SC-477),IRF1,MafK_(ab50322)	Name=3	NA	rs861212	0.47	0.47	0.441	0.454673	0.4533	0.6518	0.5101	0.2209	0.5297	0.46	0.68	0.5	0.22	0.4894	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.655214	1.655214	NA	0.493023	0.263504	NA	0.362	NA	4.564277
1196	17	76481180	76481180	G	A	ncRNA_exonic	LOC100996295	NA	NA	NA	ncRNA_exonic	ENSG00000267432	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs74001373	0.1	0.1	0.088	0.0944489	0.1024	0.1577	0.0677	0.062	0.0838	0.1	0.15	0.07	0.04	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.122952	NA	NA	NA	NA	NA	0.08	NA	4.5642666
1196	19	56694505	56694505	C	T	exonic	GALP	NA	synonymous SNV	GALP:NM_033106:exon5:c.C219T:p.D73D	exonic	ENSG00000197487	NA	synonymous SNV	ENSG00000197487:ENST00000357330:exon5:c.C219T:p.D73D	NA	NA	19q13.43	NA	NA	NA	NA	rs575756	0.32	0.32	0.305	0.314497	0.3529	0.3383	0.3617	0.1369	0.4571	0.35	0.36	0.39	0.16	0.3677	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.213282	NA	NA	0.382209	0.184067	NA	0.377	NA	4.5638576
1196	7	100482526	100482526	C	G	intronic	SRRT	NA	NA	NA	intronic	ENSG00000087087	NA	NA	NA	NA	NA	7q22.1	NA	Name=Pol2-4H8,Pol2	Name=5	NA	rs6942607	0.48	0.48	0.433	0.463059	0.4612	0.8065	0.5865	0.0983	0.5164	0.46	0.81	0.54	0.1	0.5003	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.10088	NA	NA	0.474884	0.182932	NA	0.37	NA	4.563616
1196	13	81193993	81193993	C	G	intergenic	SPRY2,NONE	dist=278907;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000227862	NA	NA	NA	Score=272;Name=lod=17	NA	13q31.1	NA	NA	NA	NA	rs3813531	0.5	0.5	0.493	0.51877	0.4364	0.5704	0.5634	0.5038	0.5389	0.44	0.55	0.56	0.48	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.03284	NA	NA	NA	NA	NA	0.341	NA	4.5636
1196	17	7806529	7806529	A	G	intronic	CHD3	NA	NA	NA	intronic	ENSG00000170004	NA	NA	NA	NA	NA	17p13.1	NA	Name=KAP1	NA	NA	rs7222046	0.7	0.7	0.679	0.750799	0.4364	0.999	0.696	0.8222	0.7607	0.43	1	0.62	0.81	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.575876	NA	NA	NA	NA	NA	0.623	NA	4.5636
1196	7	100486088	100486088	C	T	intronic	SRRT	NA	NA	NA	intronic	ENSG00000087087	NA	NA	NA	NA	NA	7q22.1	NA	Name=HEY1,Pol2	Name=2	NA	rs3087504	0.48	0.48	0.451	0.46266	0.4612	0.8056	0.5865	0.0976	0.5164	0.46	0.81	0.54	0.1	0.5007	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.751239	NA	NA	0.475	0.18384	NA	0.362	NA	4.5631
1196	2	20026319	20026319	G	A	intergenic	OSR1,FLJ12334	dist=467947;dist=42296	NA	NA	ncRNA_exonic	ENSG00000213403	NA	NA	NA	Score=467;Name=lod=105	NA	2p24.1	NA	NA	NA	NA	rs10191506	0.68	0.68	0.687	0.72504	0.4374	0.9256	0.6239	0.8623	0.7004	0.45	0.93	0.58	0.83	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.615676	NA	NA	NA	NA	NA	0.638	NA	4.5626
1196	17	48313353	48313353	T	C	intergenic	COL1A1,TMEM92	dist=34353;dist=35414	NA	NA	ncRNA_exonic	ENSG00000249838	NA	NA	NA	Score=676;Name=lod=745	NA	17q21.33	NA	NA	NA	NA	rs2696298	0.58	0.58	0.586	0.629792	0.4374	0.6468	0.4524	0.8896	0.5849	0.41	0.63	0.46	0.86	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.837749	NA	NA	NA	NA	NA	0.601	NA	4.5626
1196	17	63997069	63997069	A	G	intronic	CEP112	NA	NA	NA	intronic	ENSG00000154240	NA	NA	NA	Score=654;Name=lod=609	NA	17q24.1	NA	NA	NA	NA	rs12451575	0.54	0.54	0.475	0.536342	0.4374	0.875	0.6585	0.2322	0.6135	0.44	0.87	0.63	0.24	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.338721	NA	NA	NA	NA	NA	0.478	NA	4.5626
1196	17	63997184	63997184	C	G	intronic	CEP112	NA	NA	NA	intronic	ENSG00000154240	NA	NA	NA	Score=577;Name=lod=294	NA	17q24.1	NA	NA	NA	NA	rs2160670	0.54	0.54	0.489	0.536342	0.4374	0.875	0.6585	0.2322	0.6135	0.44	0.87	0.63	0.24	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.223433	NA	NA	NA	NA	NA	0.478	NA	4.5626
1196	18	48685468	48685468	G	A	intergenic	SMAD4,MEX3C	dist=74057;dist=15452	NA	NA	ncRNA_exonic	ENSG00000267717	NA	NA	NA	Score=642;Name=lod=543	NA	18q21.2	NA	NA	NA	NA	rs10502915	0.31	0.31	0.281	0.289936	0.4374	0.2232	0.3573	0.1452	0.3548	0.44	0.23	0.39	0.15	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.286749	1.286749	NA	NA	NA	NA	0.319	NA	4.5626
1196	14	70714091	70714091	C	T	ncRNA_exonic	ADAM21P1	NA	NA	NA	ncRNA_exonic	ENSG00000235812	NA	NA	NA	NA	NA	14q24.2	NA	NA	NA	NA	rs117006186	0.05	0.05	0.036	0.0325479	0.1044	NA	0.0375	0.0061	0.0245	0.1	NA	0.06	0.01	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.028715	NA	NA	NA	NA	NA	0.022	NA	4.5622666
1196	12	123200247	123200247	G	C	exonic	HCAR3	NA	nonsynonymous SNV	HCAR3:NM_006018:exon1:c.C1038G:p.I346M	exonic	ENSG00000255398	NA	nonsynonymous SNV	ENSG00000255398:ENST00000528880:exon1:c.C1038G:p.I346M	NA	NA	12q24.31	NA	NA	NA	NA	rs1696351	0.82	0.82	0.9	0.895966	0.9324	0.8393	0.9481	0.9894	0.7536	0.81	0.74	0.89	0.86	0.9125	0.98	0.58	T	0.0	B	0.0	B	.	.	1.000	P	.	.	0.03	T	-0.992	T	0.000	T	0.027	0.323	5.754	-0.682	-0.210	-0.387	8.700	0.323462	NA	NA	0.926477	0.977293	ID=COSM147628;OCCURENCE=1(stomach)	0.913	NA	4.5619564
1196	11	66833265	66833265	G	A	intronic	RHOD	NA	NA	NA	intronic	ENSG00000173156	NA	NA	NA	NA	NA	11q13.2	NA	NA	Name=3	NA	rs12803688	0.56	0.56	0.552	0.604832	0.4384	0.5893	0.6354	0.7421	0.5849	0.43	0.59	0.59	0.72	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.638676	NA	NA	NA	NA	NA	0.594	NA	4.5616
1196	3	9990741	9990741	C	T	ncRNA_intronic	PRRT3-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000230082	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs115898811	0.02	0.02	0.012	0.0177716	0.0358	NA	0.0461	0.0008	0.0204	0.04	NA	0.04	NA	0.0323	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.787313	NA	NA	0.037509	0.007948	NA	0.007	NA	4.5610576
1196	4	40788544	40788544	A	G	intronic	NSUN7	NA	NA	NA	ncRNA_exonic	ENSG00000248780	NA	NA	NA	Score=755;Name=lod=1557	NA	4p14	NA	NA	NA	NA	rs2953325	0.71	0.71	0.704	0.728634	0.7724	0.5208	0.8804	0.8714	0.5971	0.74	0.49	0.82	0.83	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.0678	NA	NA	NA	NA	NA	0.688	NA	4.5609333
1196	6	33660695	33660695	G	C	intronic	ITPR3	NA	NA	NA	intronic	ENSG00000096433	NA	NA	NA	NA	NA	6p21.31	NA	Name=ELF1_(SC-631),EBF1_(C-8)	Name=51	NA	rs3818524	0.49	0.49	0.431	0.511182	0.4712	0.8452	0.5735	0.0998	0.7198	0.47	0.8	0.56	0.12	0.5293	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.212395	NA	NA	0.438605	0.182025	NA	0.464	NA	4.560895
1196	11	64942416	64942416	G	T	intergenic	SPDYC,CAPN1	dist=1728;dist=6270	NA	NA	ncRNA_exonic	ENSG00000255200	NA	NA	NA	NA	NA	11q13.1	NA	Name=YY1,c-Myc	NA	NA	rs11227144	NA	NA	0.342	0.405152	0.4394	0.5149	0.487	0.2859	0.3599	NA	NA	NA	NA	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.319581	NA	NA	NA	NA	NA	0.5	NA	4.5606
1196	17	39605580	39605580	C	T	intergenic	KRT38,KRT32	dist=7984;dist=10185	NA	NA	ncRNA_exonic	ENSG00000236473	NA	NA	NA	Score=401;Name=lod=57	NA	17q21.2	NA	NA	NA	NA	rs7221098	0.45	0.45	0.437	0.420527	0.4394	0.5248	0.5634	0.3147	0.3354	0.44	0.54	0.49	0.33	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.196745	NA	NA	NA	NA	NA	0.442	NA	4.5606
1196	8	27695981	27695981	C	G	upstream	PBK	NA	NA	NA	upstream	ENSG00000168078,ENSG00000253176	NA	NA	NA	NA	NA	8p21.1	NA	Name=Pol2	NA	NA	rs3808365	0.2	0.2	0.178	0.222444	0.1064	0.3601	0.1095	0.2821	0.1994	0.09	0.35	0.12	0.25	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.439801	NA	NA	NA	NA	NA	0.232	NA	4.5602666
1196	4	15552423	15552423	C	T	intronic	CC2D2A	NA	NA	NA	intronic	ENSG00000048342	NA	NA	NA	NA	NA	4p15.32	NA	NA	NA	NA	rs2041673	0.11	0.11	0.111	0.111422	0.1561	0.0337	0.0879	0.1286	0.1391	0.14	0.03	0.11	0.16	0.1393	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.342938	2.342938	NA	0.144632	0.126931	NA	0.08	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000114168.2;CLNDSDB=.;CLNDSDBID=.	4.559968
1196	1	179320665	179320665	A	G	intronic	SOAT1	NA	NA	NA	intronic	ENSG00000057252	NA	NA	NA	NA	NA	1q25.2	NA	NA	Name=9	NA	rs13306732	0.38	0.38	0.345	0.369209	0.4404	0.4097	0.3674	0.2126	0.4673	0.42	0.44	0.4	0.23	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.225603	NA	NA	NA	NA	NA	0.413	NA	4.5596
1196	17	20384920	20384920	G	A	intergenic	LGALS9B,KRT16P3	dist=14072;dist=19907	NA	NA	ncRNA_exonic	ENSG00000229586	NA	NA	NA	Score=699;Name=lod=921	NA	17p11.2	NA	NA	NA	NA	rs1682297	0.27	0.27	0.231	0.224042	0.4404	0.13	0.3429	0.0915	0.1933	0.41	0.14	0.37	0.11	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.038551	NA	NA	NA	NA	NA	0.188	NA	4.5596
1196	13	19999890	19999890	G	A	intronic	TPTE2	NA	NA	NA	exonic	ENSG00000132958	NA	synonymous SNV	ENSG00000132958:ENST00000462409:exon14:c.C993T:p.S331S	NA	NA	13q12.11	NA	NA	NA	NA	rs2497211	0.2	0.2	NA	0.223043	0.1372	0.0655	0.1369	0.5484	0.0951	0.11	0.04	0.15	0.54	0.1367	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.243419	NA	NA	NA	NA	NA	0.022	NA	4.5594333
1196	9	119187839	119187839	C	T	UTR3	ASTN2	NM_198187:c.*30G>A,NM_198186:c.*291G>A,NM_001184734:c.*56G>A,NM_198188:c.*30G>A,NM_014010:c.*291G>A	NA	NA	UTR3	ENSG00000148219	ENST00000373996:c.*291G>A,ENST00000313400:c.*291G>A,ENST00000361209:c.*291G>A,ENST00000373986:c.*291G>A,ENST00000341734:c.*30G>A,ENST00000288520:c.*291G>A	NA	NA	NA	NA	9q33.1	NA	Name=ELF1_(SC-631)	NA	NA	rs7518	0.22	0.22	0.236	0.200479	0.2773	0.1806	0.2046	0.1884	0.1554	0.28	0.19	0.19	0.2	0.2329	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.009374	NA	NA	0.263795	0.198715	NA	0.217	NA	4.5593384
1196	6	33143948	33143948	C	G	intronic	COL11A2	NA	NA	NA	intronic	ENSG00000204248	NA	NA	NA	NA	Name=LDL cholesterol	6p21.32	NA	NA	NA	NA	rs2254287	0.54	0.54	0.524	0.547724	0.4414	0.7192	0.513	0.5265	0.5337	0.44	0.7	0.55	0.51	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.292878	NA	NA	NA	NA	NA	0.543	NA	4.5586
1196	16	8558352	8558352	T	C	intergenic	RBFOX1,TMEM114	dist=795012;dist=61150	NA	NA	ncRNA_exonic	ENSG00000260379	NA	NA	NA	Score=648;Name=lod=571	NA	16p13.2	NA	NA	NA	NA	rs11860880	0.55	0.55	0.55	0.583866	0.4414	0.6062	0.5692	0.6445	0.636	0.45	0.62	0.55	0.62	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.276647	NA	NA	NA	NA	NA	0.457	NA	4.5586
1196	2	64574682	64574682	G	A	intergenic	LINC00309,LGALSL	dist=142063;dist=106645	NA	NA	ncRNA_exonic	ENSG00000236148	NA	NA	NA	Score=730;Name=lod=1239	NA	2p14	NA	NA	NA	NA	rs2059631	0.6	0.6	0.604	0.636382	0.4423	0.9395	0.5634	0.5522	0.6892	0.44	0.92	0.52	0.55	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.405629	NA	NA	NA	NA	NA	0.645	NA	4.5577
1196	11	120707644	120707644	C	T	intronic	GRIK4	NA	NA	NA	intronic	ENSG00000149403	NA	NA	NA	NA	NA	11q23.3	NA	NA	Name=2	NA	rs3934628	0.37	0.37	0.369	0.338259	0.4423	0.4613	0.3112	0.149	0.3793	0.44	0.47	0.35	0.16	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.303562	NA	NA	NA	NA	NA	0.362	NA	4.5577
1196	16	29994736	29994736	T	A	intronic	TAOK2	NA	NA	NA	intronic	ENSG00000149930	NA	NA	NA	NA	NA	16p11.2	NA	Name=ZNF263	NA	NA	rs3814884	0.34	0.34	0.315	0.34984	0.4423	0.375	0.3141	0.1596	0.5112	0.44	0.36	0.34	0.16	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.142081	NA	NA	NA	NA	NA	0.362	NA	4.5577
1196	16	50106594	50106594	T	C	exonic	HEATR3	NA	synonymous SNV	HEATR3:NM_182922:exon5:c.T591C:p.F197F	exonic	ENSG00000155393	NA	synonymous SNV	ENSG00000155393:ENST00000285767:exon4:c.T333C:p.F111F,ENSG00000155393:ENST00000299192:exon5:c.T591C:p.F197F	Score=676;Name=lod=746	NA	16q12.1	NA	NA	NA	NA	rs2287197	0.6	0.6	0.554	0.599441	0.7097	0.6429	0.7176	0.3298	0.7219	0.72	0.62	0.71	0.33	0.6872	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.241512	1.241512	NA	0.712093	0.385578	NA	0.587	NA	4.5576736
1196	12	41961535	41961535	A	G	intronic	PDZRN4	NA	NA	NA	intronic	ENSG00000165966	NA	NA	NA	Score=667;Name=lod=686	NA	12q12	NA	NA	NA	NA	rs12310084	0.19	0.19	0.197	0.231829	0.1382	0.1845	0.1427	0.3366	0.2986	0.14	0.18	0.12	0.33	0.1692	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.147958	2.147958	NA	0.135465	0.299046	NA	0.225	NA	4.557135
1196	4	42032009	42032009	T	C	intronic	SLC30A9	NA	NA	NA	ncRNA_exonic	ENSG00000249212	NA	NA	NA	Score=606;Name=lod=387	NA	4p13	NA	NA	NA	NA	rs4861154	0.71	0.71	0.66	0.667133	0.7763	0.9583	0.804	0.1884	0.8047	0.79	0.96	0.79	0.22	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.217188	NA	NA	NA	NA	NA	0.558	NA	4.5570333
1196	10	81058027	81058027	A	G	intronic	ZMIZ1	NA	NA	NA	intronic	ENSG00000108175	NA	NA	NA	NA	Name=Celiac disease	10q22.3	NA	NA	NA	NA	rs1250552	0.58	0.58	0.584	0.615615	0.4433	0.7004	0.464	0.7738	0.5992	0.43	0.74	0.48	0.7	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.315152	NA	NA	NA	NA	NA	0.478	NA	4.5567
1196	17	3776555	3776555	T	C	intronic	CAMKK1	NA	NA	NA	intronic	ENSG00000004660	NA	NA	NA	NA	NA	17p13.2	NA	Name=ZNF263	NA	NA	rs34231122	0.48	0.48	0.486	0.461661	0.4433	0.4147	0.3818	0.6725	0.3006	0.46	0.43	0.4	0.64	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.083662	NA	NA	NA	NA	NA	0.486	NA	4.5567
1196	17	28862034	28862034	G	A	intergenic	GOSR1,TBC1D29	dist=8202;dist=24550	NA	NA	ncRNA_intronic	ENSG00000264958	NA	NA	NA	NA	NA	17q11.2	NA	Name=ZNF263	NA	NA	rs141108	0.5	0.5	0.501	0.496605	0.4433	0.8244	0.4424	0.3086	0.5061	0.45	0.8	0.43	0.3	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.438174	NA	NA	NA	NA	NA	0.536	NA	4.5567
1196	13	50465577	50465577	A	G	ncRNA_exonic	CTAGE10P	NA	NA	NA	ncRNA_exonic	ENSG00000181358	NA	NA	NA	NA	NA	13q14.2	NA	NA	NA	NA	rs75540113	0.05	0.05	0.048	0.0858626	0.0507	0.0903	0.0418	0.0454	0.2035	0.04	0.08	0.06	0.04	0.0596	0.098	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.08888	NA	NA	NA	NA	NA	0.065	NA	4.5563666
1196	1	158165578	158165578	G	A	intergenic	CD1D,CD1A	dist=9362;dist=58349	NA	NA	ncRNA_exonic	ENSG00000229914	NA	NA	NA	Score=734;Name=lod=1279	NA	1q23.1	NA	NA	NA	NA	rs1633127	0.45	0.45	0.423	0.472244	0.4443	0.6071	0.3213	0.3185	0.6769	0.46	0.57	0.37	0.34	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.889048	2.889048	NA	NA	NA	NA	0.486	NA	4.5557
1196	1	158165601	158165601	T	C	intergenic	CD1D,CD1A	dist=9385;dist=58326	NA	NA	ncRNA_exonic	ENSG00000229914	NA	NA	NA	Score=734;Name=lod=1279	NA	1q23.1	NA	NA	NA	NA	rs1633128	0.45	0.45	0.421	0.472244	0.4443	0.6071	0.3213	0.3185	0.6769	0.46	0.57	0.37	0.34	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.596757	NA	NA	NA	NA	NA	0.486	NA	4.5557
1196	1	158165722	158165722	G	A	intergenic	CD1D,CD1A	dist=9506;dist=58205	NA	NA	ncRNA_exonic	ENSG00000229914	NA	NA	NA	Score=734;Name=lod=1279	NA	1q23.1	NA	NA	NA	NA	rs1633129	0.45	0.45	0.422	0.472244	0.4443	0.6071	0.3213	0.3185	0.6769	0.46	0.57	0.37	0.34	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.441547	NA	NA	NA	NA	NA	0.486	NA	4.5557
1196	1	158165742	158165742	A	T	intergenic	CD1D,CD1A	dist=9526;dist=58185	NA	NA	ncRNA_exonic	ENSG00000229914	NA	NA	NA	Score=734;Name=lod=1279	NA	1q23.1	NA	NA	NA	NA	rs1633130	0.45	0.45	0.428	0.472244	0.4443	0.6071	0.3213	0.3185	0.6769	0.46	0.57	0.37	0.34	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.385135	1.385135	NA	NA	NA	NA	0.486	NA	4.5557
1196	10	5174794	5174794	C	T	intergenic	AKR1C3,AKR1CL1	dist=24916;dist=21861	NA	NA	ncRNA_exonic	ENSG00000225418	NA	NA	NA	Score=456;Name=lod=95	NA	10p15.1	NA	NA	NA	NA	rs11252990	0.29	0.29	0.291	0.271565	0.4443	0.001	0.2622	0.4244	0.1728	0.43	0.0017	0.3	0.42	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.255725	NA	NA	NA	NA	NA	0.341	NA	4.5557
1196	11	79700145	79700145	A	G	intergenic	TENM4,MIR4300	dist=548450;dist=1901638	NA	NA	ncRNA_exonic	ENSG00000254471	NA	NA	NA	Score=333;Name=lod=30	NA	11q14.1	NA	NA	NA	NA	rs585747	0.55	0.55	0.551	0.53774	0.4443	0.6647	0.3329	0.677	0.4601	0.45	0.68	0.36	0.67	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.32307	NA	NA	NA	NA	NA	0.384	NA	4.5557
1196	19	10402131	10402131	T	C	intronic	ICAM5	NA	NA	NA	intronic	ENSG00000105376	NA	NA	NA	NA	NA	19p13.2	NA	Name=IRF1,TBP,ZNF263,TAF1,Mxi1_(bHLH),Pol2	Name=93	NA	rs901886	0.37	0.37	0.336	0.374002	0.5229	0.3165	0.5749	0.093	0.5174	0.52	0.33	0.54	0.08	0.4739	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.194973	NA	NA	0.447652	0.140133	NA	0.341	NA	4.555548
1196	19	41386366	41386366	T	G	intronic	CYP2A7	NA	NA	NA	intronic	ENSG00000198077,ENSG00000268797	NA	NA	NA	NA	NA	19q13.2	NA	Name=Rad21,CTCF_(SC-5916)	NA	NA	rs3815706	0.14	0.14	0.124	0.114217	0.1451	0.1796	0.0821	0.0802	0.0838	0.15	0.19	0.09	0.1	0.1409	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.509482	NA	NA	0.158721	0.091466	NA	0.109	NA	4.555279
1196	6	152784054	152784054	G	A	intronic	SYNE1	NA	NA	NA	intronic	ENSG00000131018	NA	NA	NA	NA	NA	6q25.2	NA	NA	Name=14	NA	rs7775181	0.23	0.23	0.244	0.248802	0.1511	0.4286	0.1124	0.3041	0.1861	0.15	0.4	0.1	0.26	0.1631	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.766875	NA	NA	0.130698	0.272583	NA	0.275	NA	4.555102
1197	5	37318295	37318295	G	T	intronic	NUP155	NA	NA	NA	intronic	ENSG00000113569	NA	NA	NA	NA	NA	5p13.2	NA	NA	Name=2	NA	rs217797	0.55	0.55	0.551	0.60603	0.4453	0.4851	0.5288	0.9039	0.5481	0.44	0.44	0.53	0.86	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.043156	NA	NA	NA	NA	NA	0.594	NA	4.5547
1197	9	102820002	102820002	T	C	intronic	ERP44	NA	NA	NA	intronic	ENSG00000023318	NA	NA	NA	NA	NA	9q31.1	NA	Name=MafK_(ab50322),MafK_(SC-477),MafF_(M8194)	NA	NA	rs942163	0.56	0.56	0.54	0.580871	0.4453	0.8671	0.6671	0.2912	0.7556	0.44	0.89	0.64	0.32	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.520947	1.520947	NA	NA	NA	NA	0.543	NA	4.5547
1197	9	116091342	116091342	T	C	intronic	WDR31	NA	NA	NA	intronic	ENSG00000148225	NA	NA	NA	NA	NA	9q32	NA	Name=USF-1	NA	NA	rs3810921	0.39	0.39	0.401	0.408946	0.4453	0.0833	0.2911	0.6399	0.4785	0.46	0.07	0.31	0.7	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.651721	NA	NA	NA	NA	NA	0.457	NA	4.5547
1197	10	95641393	95641393	G	A	intergenic	LGI1,SLC35G1	dist=83477;dist=12337	NA	NA	ncRNA_exonic	ENSG00000227995	NA	NA	NA	Score=681;Name=lod=783	NA	10q23.33	NA	NA	NA	NA	rs4917958	0.55	0.55	0.493	0.521965	0.4453	0.8671	0.5029	0.2814	0.5838	0.47	0.87	0.52	0.3	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.511677	NA	NA	NA	NA	NA	0.442	NA	4.5547
1197	10	95641485	95641485	C	T	intergenic	LGI1,SLC35G1	dist=83569;dist=12245	NA	NA	ncRNA_exonic	ENSG00000227995	NA	NA	NA	Score=651;Name=lod=590	NA	10q23.33	NA	NA	NA	NA	rs7905161	0.56	0.56	0.515	0.540535	0.4453	0.8671	0.5101	0.348	0.5838	0.47	0.87	0.53	0.36	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.17581	NA	NA	NA	NA	NA	0.442	NA	4.5547
1197	6	32427604	32427604	G	C	intergenic	HLA-DRA,HLA-DRB5	dist=14778;dist=57550	NA	NA	ncRNA_exonic	ENSG00000196301	NA	NA	NA	NA	NA	6p21.32	NA	Name=HA-E2F1	NA	NA	rs13207140	0.12	0.12	0.099	0.121406	0.1779	0.0526	0.1138	0.0991	0.1697	0.18	0.05	0.12	0.11	0.1261	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.62542	NA	NA	0.141386	0.097032	NA	0.116	NA	4.554614
1197	6	32427899	32427899	G	A	intergenic	HLA-DRA,HLA-DRB5	dist=15073;dist=57255	NA	NA	ncRNA_intronic	ENSG00000196301	NA	NA	NA	NA	NA	6p21.32	NA	Name=c-Myc,HA-E2F1,Pol2	NA	NA	rs17209119	0.12	0.12	0.094	0.121006	0.1789	0.0526	0.1138	0.0976	0.1687	0.18	0.05	0.12	0.11	0.1253	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.520193	NA	NA	0.141386	0.09532	NA	0.13	NA	4.554414
1197	12	104067897	104067897	G	A	intronic	STAB2	NA	NA	NA	intronic	ENSG00000136011	NA	NA	NA	NA	NA	12q23.3	NA	Name=HNF4A_(H-171)	NA	NA	rs703644	0.15	0.15	0.139	0.13758	0.1441	0.2063	0.1931	0.0711	0.1104	0.14	0.24	0.17	0.07	0.1532	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.723003	NA	NA	0.148372	0.088516	NA	0.08	NA	4.554328
1197	6	32427894	32427894	T	C	intergenic	HLA-DRA,HLA-DRB5	dist=15068;dist=57260	NA	NA	ncRNA_intronic	ENSG00000196301	NA	NA	NA	NA	NA	6p21.32	NA	Name=Pol2,HA-E2F1,c-Myc	NA	NA	rs17209112	0.12	0.12	0.088	0.121006	0.1789	0.0526	0.1138	0.0976	0.1687	0.18	0.05	0.12	0.11	0.1254	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.831231	NA	NA	0.141386	0.09532	NA	0.13	NA	4.554314
1197	19	48389363	48389363	G	A	intronic	SULT2A1	NA	NA	NA	intronic	ENSG00000105398	NA	NA	NA	NA	NA	19q13.33	NA	Name=KAP1	NA	NA	rs296361	0.07	0.07	0.071	0.0632987	0.161	0.004	0.062	0.003	0.1063	0.17	0.0017	0.07	0.01	0.1276	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.159901	NA	NA	0.157791	0.027009	NA	0.159	NA	4.553609
1197	3	10353550	10353550	T	C	intronic	SEC13	NA	NA	NA	intronic	ENSG00000157020	NA	NA	NA	NA	NA	3p25.3	NA	Name=Pol2	NA	NA	rs35670	0.18	0.18	0.204	0.182308	0.2296	0.0069	0.2262	0.2716	0.1626	0.22	0.0017	0.22	0.32	0.2173	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.322041	NA	NA	NA	NA	NA	0.348	NA	4.5531
1197	14	25288513	25288513	C	T	intronic	STXBP6	NA	NA	NA	exonic	ENSG00000168952	NA	synonymous SNV	ENSG00000168952:ENST00000548369:exon1:c.G33A:p.A11A	NA	NA	14q12	NA	NA	NA	NA	rs872978	0.19	0.19	0.213	0.207069	0.0964	0.1766	0.0677	0.472	0.093	0.1	0.17	0.06	0.43	0.1839	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.112186	NA	NA	NA	NA	NA	0.145	NA	4.5530333
1197	11	65480768	65480768	A	G	intronic	KAT5	NA	NA	NA	intronic	ENSG00000172977	NA	NA	NA	Score=736;Name=lod=1308	NA	11q13.1	Score=953;Name=V$GATA2_01	NA	NA	NA	rs4244812	0.52	0.52	0.45	0.498602	0.4801	0.6131	0.6095	0.4614	0.3712	0.47	0.6	0.57	0.46	0.4968	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.719715	1.719715	NA	0.470205	0.464286	NA	0.457	NA	4.552895
1197	19	44284648	44284648	T	C	intronic	KCNN4	NA	NA	NA	intronic	ENSG00000104783	NA	NA	NA	NA	NA	19q13.31	NA	Name=ZNF263	NA	NA	rs112533386	NA	NA	0.334	0.472045	0.4473	0.4633	0.438	0.3752	0.6616	NA	NA	NA	NA	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.369364	NA	NA	NA	NA	NA	0.022	NA	4.5527
1197	4	141598290	141598290	A	G	intronic	TBC1D9	NA	NA	NA	intronic	ENSG00000109436	NA	NA	NA	Score=251;Name=lod=14	NA	4q31.21	NA	NA	NA	NA	rs2303912	0.12	0.12	0.113	0.100639	0.1581	0.0853	0.072	0.0998	0.0787	0.16	0.1	0.1	0.09	0.1387	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.740808	1.740808	NA	0.150828	0.1161	NA	0.087	NA	4.552372
1197	2	128367092	128367092	G	A	exonic	MYO7B	NA	synonymous SNV	MYO7B:NM_001080527:exon23:c.G2826A:p.S942S	exonic	ENSG00000169994	NA	synonymous SNV	ENSG00000169994:ENST00000409816:exon22:c.G2826A:p.S942S,ENSG00000169994:ENST00000389524:exon23:c.G2826A:p.S942S,ENSG00000169994:ENST00000428314:exon23:c.G2826A:p.S942S	NA	NA	2q14.3	NA	NA	NA	NA	rs777432	0.29	0.29	0.298	0.321086	0.3857	0.1319	0.2478	0.3661	0.4407	0.37	0.14	0.28	0.34	0.3741	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.117994	NA	NA	0.354704	0.339347	ID=COSM1399256,COSM1399257;OCCURENCE=1(large_intestine)	0.333	NA	4.5521626
1197	17	48269903	48269903	A	G	intronic	COL1A1	NA	NA	NA	intronic	ENSG00000108821	NA	NA	NA	NA	NA	17q21.33	NA	Name=ZEB1_(SC-25388)	NA	NA	rs2696247	0.18	0.18	0.188	0.198882	0.1392	0.369	0.1513	0.1006	0.2515	0.13	0.34	0.11	0.14	0.1731	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.127778	NA	NA	0.135814	0.113255	NA	0.159	NA	4.551886
1197	1	192216230	192216230	A	G	intergenic	RGS18,RGS21	dist=61285;dist=69892	NA	NA	ncRNA_exonic	ENSG00000226723	NA	NA	NA	Score=837;Name=lod=3357	NA	1q31.2	NA	NA	NA	NA	rs1175148	0.43	0.43	0.442	0.471446	0.4483	0.1627	0.3775	0.761	0.4888	0.45	0.16	0.4	0.75	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.379074	NA	NA	NA	NA	NA	0.551	NA	4.5517
1197	1	192216486	192216486	T	C	intergenic	RGS18,RGS21	dist=61541;dist=69636	NA	NA	ncRNA_exonic	ENSG00000226723	NA	NA	NA	Score=837;Name=lod=3357	NA	1q31.2	NA	NA	NA	NA	rs1175147	0.43	0.43	0.46	0.471446	0.4483	0.1627	0.3775	0.761	0.4888	0.45	0.16	0.4	0.75	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.21076	NA	NA	NA	NA	NA	0.543	NA	4.5517
1197	1	192216818	192216818	G	A	intergenic	RGS18,RGS21	dist=61873;dist=69304	NA	NA	ncRNA_exonic	ENSG00000236792	NA	NA	NA	Score=837;Name=lod=3357	NA	1q31.2	NA	NA	NA	NA	rs1175145	0.43	0.43	0.458	0.471446	0.4483	0.1627	0.3775	0.761	0.4888	0.45	0.16	0.4	0.75	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.144011	NA	NA	NA	NA	NA	0.551	NA	4.5517
1197	1	192216848	192216848	C	G	intergenic	RGS18,RGS21	dist=61903;dist=69274	NA	NA	ncRNA_exonic	ENSG00000236792	NA	NA	NA	Score=837;Name=lod=3357	NA	1q31.2	NA	NA	NA	NA	rs1175144	0.42	0.42	0.443	0.471446	0.4483	0.1627	0.3775	0.761	0.4888	0.43	0.15	0.38	0.72	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.293742	NA	NA	NA	NA	NA	0.543	NA	4.5517
1197	3	33558407	33558407	T	C	intronic	CLASP2	NA	NA	NA	intronic	ENSG00000163539	NA	NA	NA	NA	NA	3p22.3	NA	NA	Name=3	NA	rs1357541	0.42	0.42	0.407	0.395168	0.4483	0.3661	0.5447	0.3313	0.3507	0.46	0.37	0.53	0.34	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.194563	NA	NA	NA	NA	NA	0.471	NA	4.5517
1197	10	8556152	8556152	A	G	intergenic	GATA3,NONE	dist=438988;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000213771	NA	NA	NA	Score=660;Name=lod=640	NA	10p14	NA	NA	NA	NA	rs4329577	0.49	0.49	0.475	0.483826	0.4483	0.5188	0.4697	0.5242	0.4397	0.44	0.55	0.46	0.53	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.136303	NA	NA	NA	NA	NA	0.406	NA	4.5517
1197	18	14146624	14146624	G	A	intergenic	ZNF519,ANKRD20A5P	dist=14135;dist=32472	NA	NA	ncRNA_exonic	ENSG00000267324	NA	NA	NA	Score=626;Name=lod=468	NA	18p11.21	NA	NA	NA	NA	rs12607822	0.48	0.48	0.428	0.452077	0.4483	0.8423	0.5274	0.0726	0.5133	0.45	0.85	0.51	0.08	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.527949	1.527949	NA	NA	NA	NA	0.348	NA	4.5517
1197	18	14146691	14146691	G	A	intergenic	ZNF519,ANKRD20A5P	dist=14202;dist=32405	NA	NA	ncRNA_intronic	ENSG00000267324	NA	NA	NA	Score=626;Name=lod=468	NA	18p11.21	NA	NA	NA	NA	rs12607829	0.49	0.49	0.445	0.460064	0.4483	0.8413	0.5288	0.1029	0.5133	0.45	0.85	0.51	0.11	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.630711	NA	NA	NA	NA	NA	0.377	NA	4.5517
1197	12	56294335	56294335	G	A	downstream	WIBG	NA	NA	NA	ncRNA_exonic	ENSG00000257569	NA	NA	NA	Score=329;Name=lod=29	NA	12q13.2	NA	Name=Pol2	NA	NA	rs9739196	0.75	0.75	0.782	0.74381	0.7952	0.7758	0.7637	0.5946	0.8456	0.8	0.8	0.72	0.64	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.343797	NA	NA	0.820553	0.607659	NA	0.79	NA	4.5509136
1197	1	79986910	79986910	C	A	intergenic	ELTD1,NONE	dist=514415;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000232676	NA	NA	NA	Score=804;Name=lod=2460	NA	1p31.1	NA	NA	NA	NA	rs17453405	0.28	0.28	0.274	0.243211	0.4493	0.1845	0.2622	0.0711	0.3108	0.43	0.23	0.3	0.09	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.122727	NA	NA	NA	NA	NA	0.268	NA	4.5507
1197	1	79987501	79987501	T	C	intergenic	ELTD1,NONE	dist=515006;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000232676	NA	NA	NA	Score=804;Name=lod=2460	NA	1p31.1	NA	NA	NA	NA	rs17453503	0.28	0.28	0.271	0.243211	0.4493	0.1845	0.2622	0.0711	0.3108	0.43	0.23	0.3	0.09	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.03449	NA	NA	NA	NA	NA	0.268	NA	4.5507
1197	7	2749170	2749170	G	T	intronic	AMZ1	NA	NA	NA	intronic	ENSG00000174945	NA	NA	NA	NA	NA	7p22.3	NA	Name=USF2,USF-1	NA	NA	rs4721978	0.34	0.34	NA	0.336661	0.4493	0.252	0.5216	0.1051	0.4898	0.44	0.28	0.5	0.13	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.175826	NA	NA	NA	NA	NA	NA	NA	4.5507
1197	12	12721298	12721298	C	T	intergenic	DUSP16,CREBL2	dist=5850;dist=43533	NA	NA	ncRNA_exonic	ENSG00000240424	NA	NA	NA	Score=758;Name=lod=1602	NA	12p13.2	NA	NA	NA	NA	rs4237941	0.29	0.29	0.268	0.266773	0.4493	0.0109	0.5216	0.1672	0.2965	0.45	0.02	0.54	0.18	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.221658	NA	NA	NA	NA	NA	0.413	NA	4.5507
1197	14	107170410	107170410	G	C	intergenic	LINC00221,NONE	dist=218881;dist=NONE	NA	NA	UTR5	ENSG00000211973	ENST00000390633:c.-43C>G	NA	NA	NA	NA	14q32.33	NA	Name=Pol2,MEF2A,POU2F2,EBF1_(C-8),Oct-2,ZEB1_(SC-25388),NFKB	Name=10	NA	rs10220412	0.5	0.5	0.478	0.554113	0.4095	0.5069	0.4553	0.6619	0.6759	0.4	0.47	0.49	0.68	0.4732	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.187877	NA	NA	0.40017	0.587273	NA	0.565	NA	4.5504634
1197	4	126241871	126241871	C	T	exonic	FAT4	NA	synonymous SNV	FAT4:NM_024582:exon1:c.C4305T:p.I1435I	exonic	ENSG00000196159	NA	synonymous SNV	ENSG00000196159:ENST00000394329:exon1:c.C4305T:p.I1435I	Score=440;Name=lod=82	NA	4q28.1	NA	NA	NA	NA	rs2710555	0.68	0.68	0.688	0.711262	0.7127	0.4474	0.7277	0.8979	0.7178	0.71	0.43	0.74	0.88	0.6974	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.822881	NA	NA	0.706353	0.858839	NA	0.761	NA	4.5502136
1197	12	14993608	14993608	G	A	exonic	ART4	NA	synonymous SNV	ART4:NM_021071:exon2:c.C624T:p.L208L	exonic	ENSG00000111339	NA	synonymous SNV	ENSG00000111339:ENST00000228936:exon2:c.C624T:p.L208L,ENSG00000111339:ENST00000420600:exon2:c.C573T:p.L191L	NA	NA	12p12.3	NA	NA	NA	NA	rs3088189	0.28	0.28	0.263	0.292732	0.3728	0.0982	0.3746	0.2685	0.3855	0.36	0.09	0.41	0.28	0.3488	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.659204	NA	NA	0.395116	0.279392	ID=COSM147450;OCCURENCE=1(stomach),1(prostate)	0.42	NA	4.5499506
1197	3	107047443	107047443	C	T	intergenic	LOC344595,CCDC54	dist=1632;dist=48745	NA	NA	ncRNA_exonic	ENSG00000241218	NA	NA	NA	Score=831;Name=lod=3189	NA	3q13.12	NA	NA	NA	NA	rs2676364	0.67	0.67	0.669	0.723842	0.4503	0.9772	0.6729	0.7345	0.7658	0.47	0.97	0.6	0.7	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.094413	NA	NA	NA	NA	NA	0.565	NA	4.5497
1197	3	64601550	64601550	T	C	intronic	ADAMTS9	NA	NA	NA	intronic	ENSG00000163638	NA	NA	NA	NA	NA	3p14.1	NA	NA	Name=2	NA	rs4589926	0.5	0.5	0.488	0.515974	0.4513	0.5278	0.4135	0.6082	0.5184	0.44	0.5	0.44	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.312908	NA	NA	NA	NA	NA	0.587	NA	4.5487
1197	4	85166020	85166020	C	T	intergenic	AGPAT9,NKX6-1	dist=638993;dist=248416	NA	NA	ncRNA_exonic	ENSG00000214980	NA	NA	NA	Score=833;Name=lod=3230	NA	4q21.23	NA	NA	NA	NA	rs348700	0.31	0.31	0.269	0.262979	0.4513	0.1359	0.3112	0.2821	0.1401	0.47	0.12	0.31	0.25	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.023709	NA	NA	NA	NA	NA	0.399	NA	4.5487
1197	19	3911012	3911012	T	A	intronic	ATCAY	NA	NA	NA	intronic	ENSG00000167654	NA	NA	NA	NA	NA	19p13.3	NA	Name=SUZ12	NA	NA	rs4807528	0.65	0.65	0.605	0.697484	0.4513	0.9425	0.6729	0.646	0.7853	0.44	0.94	0.65	0.64	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.552995	NA	NA	NA	NA	NA	0.725	NA	4.5487
1197	7	93551428	93551428	C	T	UTR5	GNG11	NM_004126:c.-22C>T	NA	NA	UTR5	ENSG00000127920	ENST00000248564:c.-22C>T	NA	NA	NA	NA	7q21.3	NA	Name=CTCF_(C-20),EBF,Ini1,GATA-2,CTCF,TAF1,NRSF,Pol2	Name=125	NA	rs4262	0.58	0.58	0.576	0.546725	0.5954	0.7411	0.5937	0.3351	0.5491	0.59	0.76	0.59	0.36	0.6103	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.005356	NA	NA	0.579186	0.360418	NA	0.63	NA	4.5484474
1197	1	82188756	82188756	G	A	intergenic	NONE,LPHN2	dist=NONE;dist=77326	NA	NA	intronic	ENSG00000117114	NA	NA	NA	Score=588;Name=lod=327	NA	1p31.1	NA	NA	NA	NA	rs72715733	0.09	0.09	0.084	0.0932508	0.1183	0.0486	0.0821	0.084	0.1339	0.11	0.06	0.08	0.08	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.464403	NA	NA	NA	NA	NA	0.145	NA	4.5483667
1197	14	70713961	70713961	G	A	ncRNA_exonic	ADAM21P1	NA	NA	NA	ncRNA_exonic	ENSG00000235812	NA	NA	NA	NA	NA	14q24.2	NA	NA	NA	NA	rs199806705	NA	NA	0.014	0.0730831	0.1183	0.0813	0.0476	0.0658	0.046	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.446029	NA	NA	NA	NA	NA	NA	NA	4.5483666
1197	14	70713962	70713962	T	C	ncRNA_exonic	ADAM21P1	NA	NA	NA	ncRNA_exonic	ENSG00000235812	NA	NA	NA	NA	NA	14q24.2	NA	NA	NA	NA	rs201148427	NA	NA	0.014	0.0728834	0.1183	0.0813	0.0476	0.0651	0.046	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.185924	NA	NA	NA	NA	NA	NA	NA	4.5483666
1197	11	1628844	1628844	A	G	UTR3	KRTAP5-3	NM_001012708:c.*55T>C	NA	NA	UTR3	ENSG00000196224	ENST00000399685:c.*55T>C	NA	NA	NA	NA	11p15.5	NA	NA	Name=5	NA	rs1989592	0.75	0.75	0.764	0.733626	0.7853	0.5169	0.7046	0.9198	0.6728	0.79	0.53	0.75	0.92	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.315045	NA	NA	NA	NA	NA	0.703	NA	4.5480334
1197	11	6891528	6891528	C	G	exonic	OR10A2	NA	synonymous SNV	OR10A2:NM_001004460:exon1:c.C543G:p.L181L	exonic	ENSG00000170790	NA	synonymous SNV	ENSG00000170790:ENST00000307322:exon1:c.C543G:p.L181L	NA	NA	11p15.4	NA	NA	NA	NA	rs7117739	0.29	0.29	0.28	0.328075	0.3678	0.3135	0.379	0.2073	0.4294	0.34	0.3	0.34	0.16	0.3617	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.055001	NA	NA	0.389199	0.203998	NA	0.254	NA	4.5479676
1197	8	22570844	22570844	G	A	UTR3	PEBP4	NM_144962:c.*39C>T	NA	NA	ncRNA_UTR3	ENSG00000134020	NA	NA	NA	NA	NA	8p21.3	Score=985;Name=V$EN1_01	NA	NA	NA	rs3853	0.32	0.32	0.297	0.285942	0.3221	0.2996	0.4582	0.2413	0.1728	0.33	0.29	0.44	0.27	0.3149	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.715529	NA	NA	0.315075	0.270736	NA	0.261	NA	4.547925
1197	12	122492598	122492598	A	G	intronic	BCL7A	NA	NA	NA	intronic	ENSG00000110987	NA	NA	NA	NA	NA	12q24.31	NA	Name=ZNF263,CTCF,HMGN3,Pol2	NA	NA	rs2280573	0.5	0.5	0.502	0.507788	0.4523	0.504	0.4063	0.6498	0.4489	0.45	0.47	0.45	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.410242	NA	NA	NA	NA	NA	0.572	NA	4.5477
1197	22	17118076	17118076	G	A	ncRNA_intronic	TPTEP1	NA	NA	NA	ncRNA_intronic	ENSG00000100181	NA	NA	NA	NA	NA	22q11.1	NA	NA	NA	NA	rs71326265	0.05	0.05	0.035	0.038738	0.1193	NA	0.049	0.0053	0.0337	0.12	NA	0.07	0.01	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.685173	NA	NA	NA	NA	NA	0.022	NA	4.5473666
1197	3	148459988	148459988	A	C	UTR3	AGTR1	NM_009585:c.*86A>C,NM_000685:c.*86A>C,NM_004835:c.*86A>C,NM_031850:c.*86A>C,NM_032049:c.*86A>C	NA	NA	UTR3	ENSG00000144891	ENST00000497524:c.*86A>C,ENST00000418473:c.*86A>C,ENST00000542281:c.*86A>C,ENST00000349243:c.*86A>C,ENST00000404754:c.*86A>C,ENST00000474935:c.*86A>C,ENST00000475347:c.*86A>C,ENST00000461609:c.*86A>C,ENST00000402260:c.*86A>C	NA	NA	NA	NA	3q24	NA	NA	NA	NA	rs5186	0.16	0.16	0.135	0.117812	0.2724	0.0595	0.2334	0.0204	0.0685	0.27	0.07	0.23	0.03	0.2229	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.85036	NA	NA	0.290809	0.063927	NA	0.159	CLINSIG=other;CLNDBN=Hypertension\x2c_essential\x2c_susceptibility_to;CLNREVSTAT=single;CLNACC=RCV000019688.2;CLNDSDB=.;CLNDSDBID=.	4.5472244
1197	5	82786194	82786194	T	C	exonic	VCAN	NA	synonymous SNV	VCAN:NM_001126336:exon3:c.T348C:p.T116T,VCAN:NM_001164097:exon3:c.T348C:p.T116T,VCAN:NM_001164098:exon3:c.T348C:p.T116T,VCAN:NM_004385:exon3:c.T348C:p.T116T	exonic	ENSG00000038427	NA	synonymous SNV	ENSG00000038427:ENST00000265077:exon3:c.T348C:p.T116T,ENSG00000038427:ENST00000342785:exon3:c.T348C:p.T116T,ENSG00000038427:ENST00000343200:exon3:c.T348C:p.T116T,ENSG00000038427:ENST00000502527:exon3:c.T348C:p.T116T,ENSG00000038427:ENST00000512590:exon3:c.T204C:p.T68T,ENSG00000038427:ENST00000513960:exon3:c.T348C:p.T116T,ENSG00000038427:ENST00000513984:exon3:c.T348C:p.T116T	NA	NA	5q14.2	NA	NA	NA	NA	rs12332199	0.37	0.37	0.384	0.342252	0.3936	0.2034	0.3775	0.5	0.1943	0.4	0.2	0.38	0.53	0.3483	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.048972	NA	NA	0.377558	0.466863	NA	0.406	NA	4.5472086
1197	5	60040467	60040467	G	A	intergenic	DEPDC1B,ELOVL7	dist=44474;dist=7149	NA	NA	ncRNA_exonic	ENSG00000250148	NA	NA	NA	Score=751;Name=lod=1502	NA	5q12.1	NA	NA	NA	NA	rs4577661	0.51	0.51	0.509	0.591653	0.4533	0.4335	0.4251	0.8048	0.727	0.45	0.4	0.44	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.729241	NA	NA	NA	NA	NA	0.37	NA	4.5467
1197	9	74355185	74355185	T	G	intronic	TMEM2	NA	NA	NA	intronic	ENSG00000135048	NA	NA	NA	NA	NA	9q21.13	NA	NA	Name=22	NA	rs3753006	0.2	0.2	0.204	0.217252	0.1491	0.1577	0.2305	0.3631	0.1421	0.14	0.16	0.16	0.37	0.1696	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.248982	3.248982	NA	0.134651	0.337721	NA	0.268	NA	4.546649
1197	5	132219304	132219304	A	T	intronic	AFF4	NA	NA	NA	intronic	ENSG00000072364	NA	NA	NA	NA	NA	5q31.1	NA	Name=CTCF	NA	NA	rs997633	0.1	0.1	0.084	0.105232	0.1451	0.1141	0.0937	0.0144	0.1861	0.15	0.12	0.11	0.02	0.1491	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.938988	NA	NA	0.159376	0.034665	NA	0.13	NA	4.546424
1197	7	75630274	75630274	T	C	exonic	STYXL1	NA	synonymous SNV	STYXL1:NM_016086:exon8:c.A744G:p.Q248Q	exonic	ENSG00000127952	NA	synonymous SNV	ENSG00000127952:ENST00000340062:exon6:c.A456G:p.Q152Q,ENSG00000127952:ENST00000248600:exon8:c.A744G:p.Q248Q,ENSG00000127952:ENST00000359697:exon8:c.A744G:p.Q248Q,ENSG00000127952:ENST00000431581:exon8:c.A744G:p.Q248Q,ENSG00000127952:ENST00000451157:exon8:c.A744G:p.Q248Q	Score=387;Name=lod=50	NA	7q11.23	NA	NA	NA	NA	rs8565	0.64	0.64	0.637	0.623802	0.7127	0.5585	0.6671	0.5953	0.6074	0.7	0.55	0.69	0.64	0.6783	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.215886	NA	NA	0.729651	0.626192	NA	0.63	NA	4.5460156
1197	2	208133995	208133995	T	C	intergenic	KLF7,CREB1	dist=102025;dist=260621	NA	NA	ncRNA_intronic	ENSG00000223725,ENSG00000225064	NA	NA	NA	NA	NA	2q33.3	NA	NA	Name=6	NA	rs10173558	0.22	0.22	0.22	0.248003	0.1252	0.1687	0.1902	0.4955	0.1626	0.14	0.19	0.19	0.42	0.186	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.71704	NA	NA	0.142797	0.456952	NA	0.362	NA	4.546003
1197	12	124399550	124399550	T	C	intronic	DNAH10	NA	NA	NA	intronic	ENSG00000197653	NA	NA	NA	NA	Name=Visceral adipose tissue/subcutaneous adipose tissue ratio,Visceral adipose tissue adjusted for BMI	12q24.31	NA	NA	NA	NA	rs1316952	0.18	0.18	0.176	0.208466	0.1421	0.001	0.1455	0.5439	0.0818	0.13	0.0017	0.16	0.47	0.1727	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.785043	NA	NA	0.139211	0.43789	NA	0.188	NA	4.545989
1197	18	30846895	30846895	A	T	exonic	CCDC178	NA	nonsynonymous SNV	CCDC178:NM_001105528:exon13:c.T1394A:p.V465E,CCDC178:NM_198995:exon14:c.T1394A:p.V465E	exonic	ENSG00000166960	NA	nonsynonymous SNV	ENSG00000166960:ENST00000581524:exon1:c.T35A:p.V12E,ENSG00000166960:ENST00000402325:exon12:c.T1394A:p.V465E,ENSG00000166960:ENST00000406524:exon12:c.T1394A:p.V465E,ENSG00000166960:ENST00000403303:exon13:c.T1394A:p.V465E,ENSG00000166960:ENST00000583930:exon13:c.T1394A:p.V465E,ENSG00000166960:ENST00000300227:exon14:c.T1394A:p.V465E,ENSG00000166960:ENST00000383096:exon14:c.T1394A:p.V465E,ENSG00000166960:ENST00000579947:exon14:c.T1394A:p.V465E	NA	NA	18q12.1	NA	NA	NA	NA	rs9965081	0.93	0.93	0.924	0.932508	0.9195	0.999	0.9452	0.8457	0.9857	0.92	1	0.94	0.86	0.9398	1	1	T	0.0	B	0.0	B	.	.	1.000	P	-1.245	N	0.93	T	-0.995	T	0.000	T	0.175	0.031	4.175	-0.968	-0.447	-0.838	4.267	0.03102	NA	1	0.928188	0.85698	NA	0.906	NA	4.5458454
1197	5	60040047	60040047	C	G	intergenic	DEPDC1B,ELOVL7	dist=44054;dist=7569	NA	NA	ncRNA_exonic	ENSG00000250148	NA	NA	NA	Score=751;Name=lod=1502	NA	5q12.1	NA	NA	NA	NA	rs10054744	0.51	0.51	0.523	0.590056	0.4543	0.4335	0.4251	0.798	0.727	0.45	0.4	0.44	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.147301	NA	NA	NA	NA	NA	0.543	NA	4.5457
1197	5	60040060	60040060	A	T	intergenic	DEPDC1B,ELOVL7	dist=44067;dist=7556	NA	NA	ncRNA_exonic	ENSG00000250148	NA	NA	NA	Score=751;Name=lod=1502	NA	5q12.1	NA	NA	NA	NA	rs10069929	0.51	0.51	0.516	0.590056	0.4543	0.4335	0.4251	0.798	0.727	0.45	0.4	0.44	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.393165	NA	NA	NA	NA	NA	0.543	NA	4.5457
1197	5	70928083	70928083	C	T	intronic	MCCC2	NA	NA	NA	intronic	ENSG00000131844	NA	NA	NA	NA	NA	5q13.2	NA	Name=p300	NA	NA	rs277981	0.39	0.39	0.384	0.390375	0.4543	0.3244	0.3012	0.3828	0.4663	0.46	0.33	0.34	0.41	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.29799	NA	NA	NA	NA	NA	0.399	NA	4.5457
1197	6	160134122	160134122	T	A	intergenic	SOD2,WTAP	dist=19769;dist=13908	NA	NA	ncRNA_exonic	ENSG00000220305	NA	NA	NA	Score=593;Name=lod=343	NA	6q25.3	NA	NA	NA	NA	rs2077560	0.33	0.33	0.291	0.341254	0.4543	0.1617	0.5793	0.174	0.4673	0.46	0.15	0.55	0.18	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.916254	NA	NA	NA	NA	NA	0.29	NA	4.5457
1197	6	160134991	160134991	C	T	intergenic	SOD2,WTAP	dist=20638;dist=13039	NA	NA	ncRNA_exonic	ENSG00000220305	NA	NA	NA	Score=529;Name=lod=189	NA	6q25.3	NA	NA	NA	NA	rs2758357	0.33	0.33	0.275	0.341254	0.4543	0.1617	0.5793	0.174	0.4673	0.46	0.15	0.55	0.18	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.245469	NA	NA	NA	NA	NA	0.29	NA	4.5457
1197	1	248285906	248285906	G	A	ncRNA_exonic	OR2M1P	NA	NA	NA	ncRNA_exonic	ENSG00000177233	NA	NA	NA	NA	NA	1q44	NA	NA	NA	NA	rs41295946	0.07	0.07	0.062	0.0591054	0.0646	0.0982	0.0187	0.0567	0.045	0.06	0.14	0.02	0.06	0.0564	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.538378	NA	NA	NA	NA	NA	0.072	NA	4.5456666
1197	6	33218589	33218589	C	T	ncRNA_UTR3	VPS52	NA	NA	NA	ncRNA_UTR3	ENSG00000223501	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs41266709	0.02	0.02	0.022	0.0241613	0.0408	0.0089	0.0288	0.0144	0.0327	0.04	0.01	0.04	0.01	0.035	0.046	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.086671	NA	NA	0.045589	0.012252	NA	0.072	NA	4.5452776
1197	2	44617324	44617324	T	A	intronic	CAMKMT	NA	NA	NA	intronic	ENSG00000143919	NA	NA	NA	NA	NA	2p21	NA	Name=CTCF_(C-20),CTCF	Name=5	NA	rs1085486	0.61	0.61	0.615	0.64357	0.7157	0.3423	0.6383	0.6861	0.8262	0.7	0.38	0.65	0.71	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.613815	NA	NA	0.739281	0.690029	NA	0.645	NA	4.545019
1197	10	6001696	6001696	C	T	intronic	IL15RA	NA	NA	NA	intronic	ENSG00000134470	NA	NA	NA	NA	NA	10p15.1	Score=919;Name=V$FOXO4_01	Name=CTCF,Rad21	NA	NA	rs3136618	0.5	0.5	0.502	0.536941	0.4612	0.4177	0.4885	0.6982	0.5542	0.47	0.42	0.49	0.65	0.5074	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.26746	NA	NA	0.486395	0.663187	NA	0.391	NA	4.545005
1198	3	125301711	125301711	C	G	intronic	OSBPL11	NA	NA	NA	intronic	ENSG00000144909	NA	NA	NA	NA	NA	3q21.2	NA	Name=CTCF_(C-20),Rad21,CTCF,SMC3_(ab9263)	Name=28	NA	rs2979382	0.53	0.53	0.548	0.56869	0.4652	0.3611	0.5591	0.854	0.5102	0.47	0.35	0.56	0.83	0.5124	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.046869	NA	NA	0.477442	0.793463	NA	0.674	NA	4.544958
1198	1	12027204	12027204	C	T	intronic	PLOD1	NA	NA	NA	intronic	ENSG00000083444	NA	NA	NA	NA	NA	1p36.22	NA	Name=CEBPB,ZNF263,CTCF	NA	NA	rs2273293	0.51	0.51	0.493	0.563898	0.4553	0.6359	0.4467	0.5923	0.6462	0.45	0.57	0.44	0.59	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.238647	NA	NA	NA	NA	NA	0.428	NA	4.5447
1198	11	9522567	9522567	T	C	intronic	ZNF143	NA	NA	NA	intronic	ENSG00000166478	NA	NA	NA	NA	NA	11p15.4	NA	NA	Name=3	NA	rs2290425	0.38	0.38	0.366	0.363618	0.4553	0.3194	0.4755	0.2859	0.3405	0.44	0.33	0.48	0.27	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.573629	NA	NA	NA	NA	NA	0.471	NA	4.5447
1198	16	48531564	48531564	C	T	intergenic	MIR548AE2,N4BP1	dist=111005;dist=41073	NA	NA	ncRNA_exonic	ENSG00000260347	NA	NA	NA	Score=786;Name=lod=2082	NA	16q12.1	NA	NA	NA	NA	rs2062555	0.55	0.55	0.545	0.547923	0.4553	0.8353	0.572	0.351	0.5961	0.46	0.87	0.51	0.36	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.57987	NA	NA	NA	NA	NA	0.399	NA	4.5447
1198	19	8152725	8152725	A	G	exonic	FBN3	NA	synonymous SNV	FBN3:NM_032447:exon52:c.T6603C:p.D2201D	exonic	ENSG00000142449	NA	synonymous SNV	ENSG00000142449:ENST00000270509:exon52:c.T6603C:p.D2201D,ENSG00000142449:ENST00000600128:exon53:c.T6603C:p.D2201D,ENSG00000142449:ENST00000601739:exon53:c.T6603C:p.D2201D	Score=512;Name=lod=160	NA	19p13.2	NA	NA	NA	NA	rs12460643	0.69	0.69	0.7	0.669129	0.7028	0.4633	0.7104	0.9297	0.4652	0.7	0.47	0.7	0.92	0.6849	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.314362	NA	NA	0.734302	0.895143	NA	0.638	NA	4.5446646
1198	19	22779068	22779068	T	C	ncRNA_exonic	LOC440518	NA	NA	NA	ncRNA_exonic	ENSG00000269332	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs16999456	0.26	0.26	0.234	0.298922	0.1223	0.1181	0.2608	0.6505	0.2188	0.12	0.13	0.26	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.628285	NA	NA	NA	NA	NA	0.283	NA	4.5443666
1198	17	5036329	5036329	A	G	intronic	USP6	NA	NA	NA	intronic	ENSG00000129204	NA	NA	NA	Score=483;Name=lod=123	NA	17p13.2	NA	NA	NA	NA	rs72830923	NA	NA	0.353	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4558	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.413885	NA	NA	NA	NA	ID=COSN165314;OCCURENCE=1(breast)	NA	NA	4.5442
1198	6	32916699	32916699	C	T	intronic	HLA-DMA	NA	NA	NA	intronic	ENSG00000204257,ENSG00000248993	NA	NA	NA	NA	NA	6p21.32	NA	Name=Pol2	NA	NA	rs129654	0.22	0.22	0.205	0.253994	0.2296	0.2609	0.2925	0.1921	0.3282	0.22	0.26	0.27	0.16	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.579893	NA	NA	0.226273	0.176301	NA	0.116	NA	4.544127
1198	1	205568442	205568442	G	A	intronic	MFSD4	NA	NA	NA	intronic	ENSG00000174514	NA	NA	NA	NA	NA	1q32.1	NA	NA	Name=15	NA	rs2282452	0.32	0.32	0.285	0.272963	0.4563	0.2946	0.3141	0.1059	0.2587	0.44	0.32	0.35	0.1	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.380599	1.380599	NA	NA	NA	NA	0.232	NA	4.5437
1198	1	207105641	207105641	C	T	intronic	PIGR	NA	NA	NA	intronic	ENSG00000162896	NA	NA	NA	NA	NA	1q32.1	NA	NA	Name=6	NA	rs908702	0.34	0.34	0.324	0.289736	0.4563	0.3284	0.3242	0.1702	0.2157	0.45	0.31	0.37	0.19	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.97054	NA	NA	NA	NA	NA	0.435	NA	4.5437
1198	9	139697599	139697599	T	C	intronic	KIAA1984	NA	NA	NA	intronic	ENSG00000213213	NA	NA	NA	Score=452;Name=lod=92	NA	9q34.3	NA	NA	NA	NA	rs7048415	NA	NA	0.4	0.454473	0.4563	0.4315	0.4741	0.3888	0.5511	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.263748	NA	NA	NA	NA	NA	NA	NA	4.5437
1198	14	36524098	36524098	A	G	intergenic	BRMS1L,LINC00609	dist=182929;dist=15535	NA	NA	ncRNA_exonic	ENSG00000257720	NA	NA	NA	Score=614;Name=lod=416	NA	14q13.2	NA	NA	NA	NA	rs107196	0.55	0.55	0.563	0.627596	0.4563	0.4395	0.5865	0.8442	0.7342	0.46	0.44	0.56	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.201141	NA	NA	NA	NA	ID=COSN164668;OCCURENCE=1(breast)	0.565	NA	4.5437
1198	14	75340818	75340818	G	A	intergenic	PROX2,DLST	dist=10281;dist=7776	NA	NA	ncRNA_exonic	ENSG00000258587	NA	NA	NA	Score=476;Name=lod=115	NA	14q24.3	NA	NA	NA	NA	rs4903262	0.5	0.5	0.482	0.525359	0.4563	0.4107	0.4755	0.5991	0.6503	0.47	0.45	0.47	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.194477	NA	NA	NA	NA	NA	0.406	NA	4.5437
1198	14	75360906	75360906	G	A	intronic	DLST	NA	NA	NA	intronic	ENSG00000119689	NA	NA	NA	NA	NA	14q24.3	NA	NA	Name=5	NA	rs2070598	0.49	0.49	0.45	0.506789	0.4563	0.4127	0.4697	0.559	0.6115	0.47	0.46	0.46	0.56	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.288628	NA	NA	NA	NA	NA	0.391	NA	4.5437
1198	16	48531171	48531171	G	T	intergenic	MIR548AE2,N4BP1	dist=110612;dist=41466	NA	NA	ncRNA_exonic	ENSG00000260347	NA	NA	NA	Score=786;Name=lod=2082	NA	16q12.1	NA	NA	NA	NA	rs2062553	0.55	0.55	0.53	0.544928	0.4563	0.8353	0.5677	0.3411	0.5961	0.46	0.87	0.5	0.35	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.163217	NA	NA	NA	NA	NA	0.391	NA	4.5437
1198	13	110866265	110866265	G	A	intronic	COL4A1	NA	NA	NA	intronic	ENSG00000187498	NA	NA	NA	NA	NA	13q34	NA	NA	Name=3	NA	rs9521650	0.15	0.15	0.155	0.130391	0.16	0.2143	0.1427	0.0749	0.0798	0.16	0.23	0.13	0.06	0.1429	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.702687	NA	NA	0.153605	0.095552	NA	0.087	NA	4.543495
1198	1	6314822	6314822	T	C	exonic	GPR153	NA	synonymous SNV	GPR153:NM_207370:exon2:c.A144G:p.T48T	exonic	ENSG00000158292	NA	synonymous SNV	ENSG00000158292:ENST00000377893:exon2:c.A144G:p.T48T	NA	NA	1p36.31	Score=748;Name=V$MYOGNF1_01	NA	NA	NA	rs11590458	0.71	0.71	0.691	0.73143	0.7127	0.6181	0.8012	0.8086	0.7137	0.72	0.6	0.77	0.79	0.7092	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.335712	NA	NA	0.701512	0.790967	NA	0.623	NA	4.5432546
1198	20	55033647	55033647	T	C	exonic	CASS4	NA	synonymous SNV	CASS4:NM_001164115:exon5:c.T894C:p.R298R,CASS4:NM_001164114:exon6:c.T2043C:p.R681R,CASS4:NM_020356:exon6:c.T2205C:p.R735R,CASS4:NM_001164116:exon7:c.T2205C:p.R735R	exonic	ENSG00000087589	NA	synonymous SNV	ENSG00000087589:ENST00000434344:exon5:c.T894C:p.R298R,ENSG00000087589:ENST00000371336:exon6:c.T2205C:p.R735R,ENSG00000087589:ENST00000360314:exon7:c.T2205C:p.R735R	NA	NA	20q13.31	NA	NA	NA	NA	rs3746625	0.51	0.51	0.484	0.525759	0.339	0.9196	0.5245	0.4138	0.4642	0.32	0.92	0.47	0.37	0.4439	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.558584	NA	NA	0.340581	0.402633	NA	0.37	NA	4.5431856
1198	17	45368337	45368337	A	C	exonic	ITGB3	NA	synonymous SNV	ITGB3:NM_000212:exon9:c.A1143C:p.V381V	exonic	ENSG00000259207,ENSG00000259753	NA	synonymous SNV	ENSG00000259207:ENST00000435993:exon9:c.A1002C:p.V334V,ENSG00000259207:ENST00000559488:exon9:c.A1143C:p.V381V,ENSG00000259207:ENST00000571680:exon9:c.A1143C:p.V381V	NA	NA	17q21.32	NA	NA	NA	NA	rs15908	0.43	0.43	0.434	0.43111	0.3678	0.5476	0.3602	0.4115	0.453	0.36	0.55	0.36	0.46	0.3902	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.157682	NA	NA	0.366512	0.421244	NA	0.391	NA	4.5421546
1198	8	97172403	97172403	A	G	intronic	GDF6	NA	NA	NA	intronic	ENSG00000156466	NA	NA	NA	NA	NA	8q22.1	NA	NA	Name=61	NA	rs2466129	0.28	0.28	0.231	0.271965	0.4583	0.1716	0.2911	0.0514	0.4683	0.47	0.2	0.33	0.04	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.256737	1.256737	NA	NA	NA	NA	0.225	NA	4.5417
1198	2	228120703	228120703	T	C	ncRNA_intronic	LOC654841	NA	NA	NA	ncRNA_intronic	ENSG00000236432	NA	NA	NA	NA	NA	2q36.3	NA	NA	NA	NA	rs28470865	0.1	0.1	0.128	0.127596	0.0328	0.0526	0.0375	0.3608	0.0511	0.03	0.07	0.04	0.3	0.0601	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.104142	NA	NA	0.032076	0.25938	NA	0.094	NA	4.5416906
1198	21	43557559	43557559	T	A	exonic	UMODL1	NA	synonymous SNV	UMODL1:NM_001199527:exon21:c.T3954A:p.P1318P,UMODL1:NM_173568:exon21:c.T4170A:p.P1390P,UMODL1:NM_001004416:exon22:c.T3786A:p.P1262P,UMODL1:NM_001199528:exon22:c.T3570A:p.P1190P	exonic	ENSG00000177398	NA	synonymous SNV	ENSG00000177398:ENST00000400427:exon21:c.T3954A:p.P1318P,ENSG00000177398:ENST00000408989:exon21:c.T4170A:p.P1390P,ENSG00000177398:ENST00000400424:exon22:c.T3570A:p.P1190P,ENSG00000177398:ENST00000408910:exon22:c.T3786A:p.P1262P	NA	NA	21q22.3	NA	NA	NA	NA	rs3819141	0.33	0.33	0.31	0.335463	0.3718	0.4097	0.3703	0.1785	0.409	0.36	0.41	0.38	0.17	0.3756	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.056372	NA	NA	0.377754	0.210337	NA	0.283	NA	4.5415126
1198	2	130971063	130971063	C	T	intergenic	TUBA3E,CCDC115	dist=15029;dist=124753	NA	NA	ncRNA_exonic	ENSG00000230756	NA	NA	NA	Score=574;Name=lod=286	NA	2q21.1	NA	NA	NA	NA	rs12467443	0.43	0.43	0.251	0.490216	0.4592	0.5675	0.5562	0.4009	0.5164	0.41	0.49	0.48	0.35	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.248822	NA	NA	NA	NA	NA	0.043	NA	4.5408
1198	12	17536443	17536443	T	C	intergenic	SKP1P2,MIR3974	dist=392881;dist=289790	NA	NA	ncRNA_exonic	ENSG00000256896	NA	NA	NA	Score=833;Name=lod=3228	NA	12p12.3	NA	NA	NA	NA	rs1163971	0.39	0.39	0.363	0.351238	0.4592	0.3274	0.4611	0.2383	0.3395	0.46	0.35	0.49	0.25	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.737667	NA	NA	NA	NA	NA	0.326	NA	4.5408
1198	20	55033713	55033713	G	A	exonic	CASS4	NA	synonymous SNV	CASS4:NM_001164115:exon5:c.G960A:p.T320T,CASS4:NM_001164114:exon6:c.G2109A:p.T703T,CASS4:NM_020356:exon6:c.G2271A:p.T757T,CASS4:NM_001164116:exon7:c.G2271A:p.T757T	exonic	ENSG00000087589	NA	synonymous SNV	ENSG00000087589:ENST00000434344:exon5:c.G960A:p.T320T,ENSG00000087589:ENST00000371336:exon6:c.G2271A:p.T757T,ENSG00000087589:ENST00000360314:exon7:c.G2271A:p.T757T	NA	NA	20q13.31	NA	NA	NA	NA	rs3746626	0.52	0.52	0.492	0.525559	0.34	0.9196	0.5245	0.413	0.4632	0.33	0.92	0.47	0.37	0.447	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.457101	NA	NA	0.339149	0.401453	NA	0.377	NA	4.5405176
1198	14	70714259	70714259	A	G	ncRNA_exonic	ADAM21P1	NA	NA	NA	ncRNA_exonic	ENSG00000235812	NA	NA	NA	NA	NA	14q24.2	NA	NA	NA	NA	rs7144638	NA	NA	0.15	0.156949	0.1262	0.2907	0.085	0.1505	0.1104	NA	NA	NA	NA	NA	0.076	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.225908	NA	NA	NA	NA	NA	0.116	NA	4.5404666
1198	12	68724951	68724951	G	T	exonic	MDM1	NA	synonymous SNV	MDM1:NM_001205028:exon2:c.C69A:p.S23S,MDM1:NM_001205029:exon2:c.C69A:p.S23S,MDM1:NM_017440:exon2:c.C69A:p.S23S,MDM1:NM_020128:exon2:c.C69A:p.S23S	exonic	ENSG00000111554	NA	synonymous SNV	ENSG00000111554:ENST00000303145:exon2:c.C69A:p.S23S,ENSG00000111554:ENST00000393543:exon2:c.C69A:p.S23S,ENSG00000111554:ENST00000411698:exon2:c.C69A:p.S23S,ENSG00000111554:ENST00000430606:exon2:c.C69A:p.S23S,ENSG00000111554:ENST00000541686:exon2:c.C54A:p.S18S	Score=284;Name=lod=19	NA	12q15	NA	NA	NA	NA	rs3741808	0.68	0.68	0.691	0.67492	0.7187	0.4474	0.7378	0.8101	0.637	0.71	0.47	0.75	0.81	0.6943	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.676537	NA	NA	0.713488	0.786882	NA	0.659	NA	4.5401786
1198	1	53513437	53513437	T	C	intronic	SCP2	NA	NA	NA	intronic	ENSG00000116171	NA	NA	NA	NA	NA	1p32.3	NA	Name=eGFP-JunB,KAP1,eGFP-JunD,c-Fos,GATA-2,c-Jun,eGFP-FOS,MafK_(ab50322),ELF1_(SC-631),CCNT2,CEBPB	NA	NA	rs1288362	0.29	0.29	0.258	0.249601	0.4602	0.255	0.2983	0.0439	0.271	0.46	0.26	0.33	0.05	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.337481	NA	NA	NA	NA	ID=COSN163085;OCCURENCE=1(breast)	0.442	NA	4.5398
1198	16	48531408	48531408	A	C	intergenic	MIR548AE2,N4BP1	dist=110849;dist=41229	NA	NA	ncRNA_exonic	ENSG00000260347	NA	NA	NA	Score=786;Name=lod=2082	NA	16q12.1	NA	NA	NA	NA	rs2062554	0.63	0.63	0.632	0.655751	0.4602	0.8373	0.6095	0.7337	0.5971	0.46	0.87	0.54	0.67	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.173129	NA	NA	NA	NA	NA	0.471	NA	4.5398
1198	2	225750753	225750753	T	C	intronic	DOCK10	NA	NA	NA	intronic	ENSG00000135905	NA	NA	NA	NA	NA	2q36.2	NA	NA	Name=3	NA	rs10197805	0.19	0.19	0.215	0.224241	0.1412	0.0556	0.0937	0.5272	0.1667	0.14	0.06	0.08	0.49	0.1689	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.479343	NA	NA	0.150145	0.470269	NA	0.341	NA	4.539755
1198	3	54930699	54930699	A	T	ncRNA_exonic	CACNA2D3-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000243715	NA	NA	NA	NA	NA	3p14.3	NA	NA	NA	NA	rs6445708	0.12	0.12	0.126	0.132188	0.1272	0.0536	0.1124	0.1831	0.1636	0.12	0.05	0.14	0.2	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.759166	NA	NA	NA	NA	ID=COSN166906;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.116	NA	4.5394666
1198	3	193711182	193711182	G	A	ncRNA_exonic	DPPA2P3	NA	NA	NA	ncRNA_exonic	ENSG00000224403	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs6777021	0.39	0.39	0.376	0.432907	0.1272	0.5288	0.2853	0.6808	0.4182	0.13	0.54	0.28	0.66	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.380885	NA	NA	NA	NA	NA	0.399	NA	4.5394666
1198	2	228118910	228118910	A	G	ncRNA_intronic	LOC654841	NA	NA	NA	ncRNA_intronic	ENSG00000236432	NA	NA	NA	NA	NA	2q36.3	NA	NA	NA	NA	rs13386404	0.12	0.12	0.128	0.138379	0.0328	0.0536	0.0418	0.3986	0.0511	0.03	0.07	0.05	0.35	0.0628	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.531427	NA	NA	0.032045	0.295152	NA	0.101	NA	4.5390216
1198	1	43353134	43353134	G	T	intergenic	ZNF691,SLC2A1	dist=34988;dist=37912	NA	NA	ncRNA_exonic	ENSG00000233708	NA	NA	NA	Score=436;Name=lod=79	NA	1p34.2	NA	NA	NA	NA	rs6674019	0.35	0.35	0.34	0.350639	0.4612	0.1925	0.2911	0.4349	0.3282	0.46	0.18	0.32	0.41	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.430912	NA	NA	NA	NA	NA	0.493	NA	4.5388
1198	22	16364923	16364923	C	A	intergenic	POTEH,OR11H1	dist=76986;dist=83901	NA	NA	ncRNA_exonic	ENSG00000231565	NA	NA	NA	Score=770;Name=lod=1797	NA	22q11.1	NA	NA	NA	NA	rs5771604	0.43	0.43	0.475	0.540136	0.4612	0.3363	0.4582	0.8442	0.4785	0.37	0.22	0.36	0.8	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.218327	NA	NA	NA	NA	NA	0.007	NA	4.5388
1198	6	108425822	108425822	T	G	intergenic	OSTM1,NR2E1	dist=29881;dist=61393	NA	NA	intronic	ENSG00000081087	NA	NA	NA	Score=592;Name=lod=341	NA	6q21	NA	NA	NA	NA	rs6938700	0.15	0.15	0.15	0.167931	0.1282	0.1766	0.121	0.2587	0.1104	0.12	0.15	0.11	0.23	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.484049	NA	NA	NA	NA	NA	0.174	NA	4.5384667
1198	19	10129262	10129262	T	C	intronic	RDH8	NA	NA	NA	intronic	ENSG00000080511	NA	NA	NA	NA	NA	19p13.2	NA	Name=STAT3	NA	NA	rs1644733	0.54	0.54	0.534	0.583666	0.4622	0.5635	0.562	0.6225	0.6922	0.47	0.59	0.52	0.6	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.182646	NA	NA	NA	NA	NA	0.587	NA	4.5378
1198	16	81929488	81929488	C	T	exonic	PLCG2	NA	synonymous SNV	PLCG2:NM_002661:exon13:c.C1149T:p.D383D	exonic	ENSG00000197943	NA	synonymous SNV	ENSG00000197943:ENST00000359376:exon13:c.C1149T:p.D383D	NA	NA	16q23.3	NA	NA	NA	NA	rs1143688	0.43	0.43	0.4	0.40655	0.3549	0.7113	0.5994	0.1029	0.4192	0.38	0.71	0.54	0.12	0.4158	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.433399	NA	NA	0.358493	0.147017	NA	0.413	NA	4.5374736
1198	2	79363147	79363147	A	G	ncRNA_exonic	REG1P	NA	NA	NA	ncRNA_exonic	ENSG00000204787	NA	NA	NA	NA	NA	2p12	NA	NA	NA	NA	rs17016388	0.13	0.13	0.098	0.112819	0.1292	0.1964	0.1427	0.025	0.1074	0.14	0.2	0.14	0.02	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.095348	NA	NA	NA	NA	NA	0.101	NA	4.5374666
1198	4	141549428	141549428	A	T	intronic	TBC1D9	NA	NA	NA	intronic	ENSG00000109436	NA	NA	NA	NA	NA	4q31.21	NA	NA	Name=6	NA	rs2291710	0.23	0.23	0.246	0.25599	0.1511	0.1419	0.1542	0.5295	0.184	0.15	0.11	0.19	0.53	0.1731	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.058817	NA	NA	0.138384	0.435226	ID=COSN167339;OCCURENCE=1(large_intestine),1(endometrium)	0.29	NA	4.537416
1198	22	29915144	29915144	C	T	intronic	THOC5	NA	NA	NA	ncRNA_intronic	ENSG00000234208	NA	NA	NA	NA	NA	22q12.2	NA	Name=BCL3	NA	NA	rs2072301	0.25	0.25	0.249	0.224042	0.2714	0.3065	0.1816	0.2322	0.1094	0.26	0.25	0.22	0.25	0.2512	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.556229	NA	NA	0.273488	0.226055	NA	0.268	NA	4.5372453
1198	13	50464734	50464734	A	C	ncRNA_exonic	CTAGE10P	NA	NA	NA	ncRNA_exonic	ENSG00000181358	NA	NA	NA	NA	NA	13q14.2	NA	NA	NA	NA	rs61747168	0.05	0.05	0.032	0.0890575	0.0507	0.0903	0.0461	0.0545	0.2045	0.04	0.07	0.07	0.04	0.079	0.087	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.558524	NA	NA	NA	NA	NA	0.058	NA	4.5369666
1198	4	70172393	70172393	G	A	intergenic	UGT2B28,UGT2B4	dist=11625;dist=173490	NA	NA	ncRNA_exonic	ENSG00000251691	NA	NA	NA	NA	NA	4q13.2	NA	NA	Name=4	NA	rs13110659	0.36	0.36	0.293	0.373403	0.4632	0.369	0.4582	0.2844	0.3456	0.46	0.31	0.4	0.23	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.944387	NA	NA	NA	NA	NA	0.13	NA	4.5368
1198	17	5415623	5415623	C	T	intronic	NLRP1	NA	NA	NA	intronic	ENSG00000091592	NA	NA	NA	Score=642;Name=lod=544	NA	17p13.2	NA	NA	NA	NA	rs9911319	0.63	0.63	0.638	0.648962	0.4632	0.8998	0.4308	0.6929	0.6769	0.47	0.91	0.43	0.69	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.752513	3.752513	NA	NA	NA	NA	0.536	NA	4.5368
1198	13	50464739	50464739	G	A	ncRNA_exonic	CTAGE10P	NA	NA	NA	ncRNA_exonic	ENSG00000181358	NA	NA	NA	NA	NA	13q14.2	NA	NA	NA	NA	rs61747167	0.05	0.05	0.026	0.0890575	0.0507	0.0903	0.0461	0.0545	0.2045	0.04	0.07	0.06	0.03	0.0793	0.087	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.545178	NA	NA	NA	NA	NA	0.058	NA	4.5366666
1198	7	139102490	139102490	A	G	ncRNA_intronic	LOC100129148	NA	NA	NA	intronic	ENSG00000146963,ENSG00000269955	NA	NA	NA	NA	NA	7q34	NA	Name=Pol2-4H8	NA	NA	rs3778931	0.39	0.39	0.419	0.413738	0.2753	0.2014	0.2695	0.8684	0.2628	0.27	0.22	0.3	0.85	0.2789	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.490796	1.490796	NA	0.242656	0.739951	NA	0.471	NA	4.5364773
1198	5	1614919	1614919	A	G	ncRNA_intronic	LOC728613	NA	NA	NA	ncRNA_intronic	ENSG00000188002	NA	NA	NA	NA	NA	5p15.33	NA	NA	NA	NA	rs2883372	0.11	0.11	0.108	0.123403	0.1302	0.0069	0.1037	0.2542	0.0736	0.12	0.0017	0.12	0.23	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.633568	NA	NA	NA	NA	NA	0.152	NA	4.5364666
1198	X	142795225	142795225	G	A	exonic	SPANXN2	NA	synonymous SNV	SPANXN2:NM_001009615:exon2:c.C453T:p.D151D	exonic	ENSG00000203924	NA	synonymous SNV	ENSG00000203924:ENST00000370498:exon2:c.C453T:p.D151D	NA	NA	Xq27.3	NA	NA	NA	NA	rs3859898	0.65	0.65	0.66455	NA	NA	NA	NA	NA	NA	0.53	0.85	0.62	0.61	0.5778	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.812645	NA	NA	0.552467	0.591656	NA	0.123	NA	4.5363996
1198	19	54849481	54849481	T	G	exonic	LILRA4	NA	synonymous SNV	LILRA4:NM_012276:exon4:c.A381C:p.A127A	exonic	ENSG00000239961	NA	synonymous SNV	ENSG00000239961:ENST00000291759:exon4:c.A381C:p.A127A	NA	NA	19q13.42	NA	NA	NA	NA	rs7256494	0.36	0.36	0.358	0.389577	0.3638	0.2589	0.4251	0.4554	0.4366	0.35	0.26	0.41	0.43	0.3898	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.90572	NA	NA	0.376744	0.444394	ID=COSM1396282;OCCURENCE=1(large_intestine)	0.391	NA	4.5363226
1198	16	78198236	78198236	G	A	intronic	WWOX	NA	NA	NA	intronic	ENSG00000186153	NA	NA	NA	NA	NA	16q23.1	NA	NA	Name=20	NA	rs2303190	0.14	0.14	0.122	0.115415	0.1402	0.2341	0.1297	0.0151	0.093	0.15	0.21	0.18	0.02	0.1528	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.481212	NA	NA	0.170966	0.049442	NA	0.072	NA	4.536034
1198	16	3074426	3074426	G	C	intronic	THOC6	NA	NA	NA	intronic	ENSG00000131652	NA	NA	NA	NA	NA	16p13.3	NA	Name=TCF12,USF-1,IRF1,CCNT2,c-Myc,ZEB1_(SC-25388),PAX5-C20,PAX5-N19,SREBP2,SIX5,Ini1,YY1,HA-E2F1,Pol2-4H8,FOSL2,CHD2_(N-1250),GTF2F1_(RAP-74),Max,ELF1_(SC-631),ATF3,Mxi1_(bHLH),Pol2,BCLAF1_(M33-P5B11),YY1_(C-20),Brg1,BRCA1_(C-1863),TR4,USF1_(SC-8983),ETS1,Znf143_(16618-1-AP),E2F4,ZBTB33,GABP,USF2	NA	NA	rs56708449	0.16	0.16	0.135	0.167332	0.2376	0.124	0.1902	0.0461	0.2873	0.24	0.11	0.2	0.05	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.250007	NA	NA	0.226587	0.078757	NA	0.196	NA	4.535813
1198	2	128006078	128006078	C	T	intergenic	CYP27C1,ERCC3	dist=42735;dist=8788	NA	NA	ncRNA_exonic	ENSG00000226789	NA	NA	NA	Score=548;Name=lod=225	NA	2q14.3	NA	NA	NA	NA	rs2174270	0.49	0.49	0.459	0.445288	0.4642	0.6052	0.6066	0.3419	0.2863	0.47	0.61	0.59	0.32	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.35295	NA	NA	NA	NA	NA	0.297	NA	4.5358
1198	2	128007074	128007074	A	T	intergenic	CYP27C1,ERCC3	dist=43731;dist=7792	NA	NA	ncRNA_exonic	ENSG00000226789	NA	NA	NA	Score=583;Name=lod=312	NA	2q14.3	NA	NA	NA	NA	rs12465955	0.48	0.48	0.435	0.427316	0.4642	0.6052	0.6138	0.27	0.2863	0.47	0.61	0.59	0.26	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.668145	NA	NA	NA	NA	NA	0.29	NA	4.5358
1198	6	104466287	104466287	G	A	intergenic	GRIK2,HACE1	dist=1948329;dist=709681	NA	NA	ncRNA_exonic	ENSG00000216817	NA	NA	NA	Score=732;Name=lod=1256	NA	6q16.3	NA	NA	NA	NA	rs2205746	0.59	0.59	0.568	0.571486	0.4642	0.7302	0.6254	0.6354	0.3937	0.47	0.76	0.57	0.61	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.038069	NA	NA	NA	NA	NA	0.717	NA	4.5358
1198	9	68414170	68414170	A	C	intergenic	ANKRD20A3,LOC642236	dist=443877;dist=13613	NA	NA	ncRNA_exonic	ENSG00000232815	NA	NA	NA	NA	NA	9q13	NA	NA	Name=129	NA	rs75137747	NA	NA	NA	0.465655	0.4642	0.4544	0.4712	0.4758	0.4611	NA	NA	NA	NA	NA	0.087	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.300214	NA	NA	NA	NA	NA	0.058	NA	4.5358
1198	11	12234704	12234704	G	A	intronic	MICAL2	NA	NA	NA	intronic	ENSG00000133816	NA	NA	NA	NA	NA	11p15.3	NA	NA	Name=7	NA	rs954428	0.24	0.24	0.218	0.228834	0.4642	0.0387	0.3242	0.0507	0.3558	0.48	0.03	0.33	0.06	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.091184	NA	NA	NA	NA	NA	0.304	NA	4.5358
1198	15	41815649	41815649	A	G	intronic	RPAP1	NA	NA	NA	intronic	ENSG00000103932	NA	NA	NA	NA	NA	15q15.1	NA	NA	Name=9	NA	rs2297377	0.48	0.48	0.469	0.470048	0.4642	0.6637	0.415	0.3502	0.4775	0.46	0.69	0.41	0.33	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.754264	NA	NA	NA	NA	NA	0.5	NA	4.5358
1198	10	49763618	49763618	C	T	intronic	ARHGAP22	NA	NA	NA	intronic	ENSG00000128805	NA	NA	NA	Score=251;Name=lod=14	NA	10q11.22	NA	NA	NA	NA	rs1838570	0.14	0.14	0.103	0.144169	0.1561	0.0655	0.3242	0.1195	0.1186	0.15	0.08	0.27	0.1	0.1621	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.377835	3.377835	NA	0.146047	0.131639	NA	0.145	NA	4.535753
1198	14	39583481	39583481	A	G	upstream	GEMIN2	NA	NA	NA	UTR5	ENSG00000092208	ENST00000308317:c.-29A>G	NA	NA	Score=363;Name=lod=40	NA	14q21.1	NA	Name=FOXA1_(C-20),RFX5_(N-494),YY1,HA-E2F1,Sin3Ak-20,HDAC2_(SC-6296),Pol2-4H8,c-Myc,HEY1,NFKB,USF-1,Nrf1,TBP,TAF1,Pol2,Mxi1_(bHLH),YY1_(C-20),TR4,ELF1_(SC-631),FOXA2_(SC-6554),HNF4G_(SC-6558),CEBPB,GTF2F1_(RAP-74)	Name=148	NA	rs2277458	0.77	0.77	0.781	0.77496	0.828	0.6349	0.7565	0.8608	0.7618	0.82	0.62	0.8	0.86	0.8094	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.984551	NA	NA	0.827093	0.856559	NA	0.906	NA	4.535507
1198	16	57736047	57736047	G	A	intronic	CCDC135	NA	NA	NA	intronic	ENSG00000159625	NA	NA	NA	NA	NA	16q21	NA	NA	Name=6	NA	rs72795521	0.2	0.2	0.182	0.185703	0.1551	0.2669	0.2493	0.1513	0.135	0.16	0.25	0.22	0.18	0.1724	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.943883	1.943883	NA	0.137326	0.150364	NA	0.159	NA	4.535174
1198	17	4848450	4848450	A	G	UTR3	RNF167	NM_015528:c.*139A>G	NA	NA	UTR3	ENSG00000108523	ENST00000571816:c.*139A>G,ENST00000572430:c.*139A>G,ENST00000262482:c.*139A>G,ENST00000575111:c.*139A>G,ENST00000576229:c.*139A>G,ENST00000572382:c.*308A>G,ENST00000576965:c.*308A>G	NA	NA	NA	NA	17p13.2	NA	Name=Oct-2,POU2F2,Pol2,Brg1,Pol2-4H8	NA	NA	rs6559	0.76	0.76	0.722	0.726837	0.7982	0.498	0.8559	0.9463	0.501	0.8	0.49	0.84	0.92	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.047725	NA	NA	NA	NA	NA	0.848	NA	4.5351334
1198	18	7012123	7012123	A	G	exonic	LAMA1	NA	synonymous SNV	LAMA1:NM_005559:exon24:c.T3378C:p.G1126G	exonic	ENSG00000101680	NA	synonymous SNV	ENSG00000101680:ENST00000389658:exon24:c.T3378C:p.G1126G	NA	NA	18p11.31	NA	NA	NA	NA	rs9946794	0.4	0.4	0.402	0.420128	0.3648	0.0536	0.3833	0.851	0.2986	0.37	0.05	0.44	0.83	0.3774	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.916028	NA	NA	0.389419	0.759419	ID=COSM438362;OCCURENCE=1(breast)	0.529	NA	4.5350476
1199	1	12033113	12033113	A	G	intronic	PLOD1	NA	NA	NA	intronic	ENSG00000083444	NA	NA	NA	NA	NA	1p36.22	NA	NA	Name=4	NA	rs3737961	0.58	0.58	0.565	0.64976	0.4652	0.6875	0.4784	0.826	0.684	0.46	0.63	0.48	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.523179	NA	NA	NA	NA	NA	0.471	NA	4.5348
1199	1	12033120	12033120	G	C	intronic	PLOD1	NA	NA	NA	intronic	ENSG00000083444	NA	NA	NA	NA	NA	1p36.22	NA	NA	Name=4	NA	rs3820190	0.59	0.59	0.563	0.659345	0.4652	0.6875	0.4813	0.8608	0.684	0.46	0.63	0.48	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.003684	NA	NA	NA	NA	NA	0.471	NA	4.5348
1199	11	94179125	94179125	T	C	intronic	MRE11A	NA	NA	NA	intronic	ENSG00000020922	NA	NA	NA	NA	NA	11q21	NA	Name=MafK_(SC-477),MafK_(ab50322)	NA	NA	rs1014666	0.51	0.51	0.495	0.517173	0.4652	0.505	0.4971	0.5136	0.6022	0.44	0.55	0.5	0.57	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.124302	NA	NA	NA	NA	NA	0.442	NA	4.5348
1199	14	106445179	106445179	T	A	intergenic	ADAM6,LINC00226	dist=6821;dist=299090	NA	NA	ncRNA_exonic	ENSG00000225200	NA	NA	NA	Score=758;Name=lod=1612	NA	14q32.33	NA	NA	NA	NA	rs76723509	0.33	0.33	0.32	0.314696	0.4652	0.2907	0.3501	0.1747	0.3487	0.46	0.3	0.31	0.17	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.213152	NA	NA	NA	NA	NA	0.203	NA	4.5348
1199	16	81180988	81180988	C	G	exonic	PKD1L2	NA	unknown	UNKNOWN	exonic	ENSG00000166473	NA	unknown	UNKNOWN	Score=309;Name=lod=24	NA	16q23.2	NA	NA	NA	NA	rs7194136	0.3	0.3	0.288	0.275958	0.502	0.1528	0.255	0.1619	0.3395	0.51	0.14	0.3	0.17	0.4258	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.109331	2.109331	NA	0.537515	0.218346	NA	0.341	NA	4.534685
1199	15	25231988	25231988	C	G	ncRNA_exonic	PAR5	NA	NA	NA	ncRNA_intronic	ENSG00000224078	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs59131251	0.11	0.11	0.09	0.117013	0.1322	0.1131	0.196	0.0091	0.1953	0.13	0.12	0.15	0.02	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.142257	NA	NA	NA	NA	NA	0.065	NA	4.5344666
1199	2	160086653	160086653	C	T	exonic	TANC1	NA	synonymous SNV	TANC1:NM_033394:exon27:c.C4716T:p.A1572A	exonic	ENSG00000115183	NA	synonymous SNV	ENSG00000115183:ENST00000454300:exon25:c.C4398T:p.A1466A,ENSG00000115183:ENST00000263635:exon27:c.C4716T:p.A1572A	NA	NA	2q24.2	NA	NA	NA	NA	rs4664276	0.4	0.4	0.422	0.491014	0.3718	0.6161	0.6037	0.3949	0.5348	0.3	0.54	0.48	0.33	0.4295	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.531393	NA	NA	0.331562	0.364524	NA	NA	NA	4.5338046
1199	19	16033379	16033379	G	T	intronic	CYP4F11	NA	NA	NA	intronic	ENSG00000171903	NA	NA	NA	NA	NA	19p13.12	Score=918;Name=V$AP1FJ_Q2	NA	NA	NA	rs4808409	0.37	0.37	0.354	0.307907	0.4662	0.2212	0.379	0.2685	0.2372	0.49	0.24	0.35	0.34	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.104411	NA	NA	NA	NA	NA	0.442	NA	4.5338
1199	19	51135457	51135457	G	A	intronic	SYT3	NA	NA	NA	intronic	ENSG00000213023	NA	NA	NA	NA	NA	19q13.33	NA	Name=CTCF	NA	NA	rs1363756	0.48	0.48	0.498	0.520367	0.4662	0.1667	0.5951	0.8404	0.455	0.46	0.17	0.54	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.473762	NA	NA	NA	NA	NA	0.449	NA	4.5338
1199	3	54921903	54921903	T	C	ncRNA_intronic	CACNA2D3-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000243715	NA	NA	NA	NA	NA	3p14.3	NA	NA	NA	NA	rs3773594	0.15	0.15	0.142	0.16853	0.1332	0.0685	0.1225	0.2905	0.1759	0.12	0.07	0.15	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.294834	NA	NA	NA	NA	NA	0.116	NA	4.5334666
1199	14	107012917	107012917	T	C	intergenic	LINC00221,NONE	dist=61388;dist=NONE	NA	NA	downstream	ENSG00000211965	NA	NA	NA	NA	NA	14q32.33	NA	Name=SMC3_(ab9263),YY1_(C-20),CTCFL_(SC-98982),Znf143_(16618-1-AP),CTCF,Rad21,CTCF_(SC-5916),TCF12,SRF,CTCF_(C-20)	Name=20	NA	rs2073675	0.38	0.38	0.351	0.378195	0.3181	0.4266	0.2911	0.4728	0.3241	0.33	0.42	0.29	0.49	0.339	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.164703	NA	NA	0.309651	0.451396	NA	0.304	NA	4.533249
1199	2	125671544	125671544	G	A	intronic	CNTNAP5	NA	NA	NA	intronic	ENSG00000155052	NA	NA	NA	NA	NA	2q14.3	NA	NA	Name=12	NA	rs1840205	0.39	0.39	0.402	0.398962	0.4672	0.1617	0.3458	0.5431	0.4162	0.48	0.18	0.36	0.52	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.437516	NA	NA	NA	NA	NA	0.377	NA	4.5328
1199	4	189061223	189061223	C	T	intronic	TRIML1	NA	NA	NA	intronic	ENSG00000184108	NA	NA	NA	NA	NA	4q35.2	NA	NA	Name=4	NA	rs13131409	0.29	0.29	0.242	0.25599	0.4672	0.0645	0.4942	0.1172	0.2546	0.47	0.09	0.49	0.11	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.048002	NA	NA	NA	NA	NA	0.341	NA	4.5328
1199	14	106444926	106444926	G	A	intergenic	ADAM6,LINC00226	dist=6568;dist=299343	NA	NA	ncRNA_exonic	ENSG00000225200	NA	NA	NA	Score=758;Name=lod=1612	NA	14q32.33	NA	NA	NA	NA	rs72637122	0.34	0.34	0.341	0.332069	0.4672	0.3175	0.353	0.2141	0.3528	0.45	0.3	0.32	0.23	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.742044	NA	NA	NA	NA	NA	0.239	NA	4.5328
1199	15	83561295	83561295	G	A	intronic	HOMER2	NA	NA	NA	intronic	ENSG00000103942	NA	NA	NA	NA	NA	15q25.2	NA	Name=eGFP-GATA2	NA	NA	rs7169401	0.35	0.35	0.33	0.374601	0.4672	0.1548	0.4179	0.354	0.5031	0.47	0.14	0.43	0.33	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.527821	NA	NA	NA	NA	NA	0.37	NA	4.5328
1199	1	1900232	1900232	T	C	exonic	KIAA1751	NA	nonsynonymous SNV	KIAA1751:NM_001080484:exon11:c.A1087G:p.I363V	intergenic	ENSG00000142609,ENSG00000142609	dist=2267;dist=19169	NA	NA	NA	NA	1p36.33	NA	NA	NA	NA	rs16824588	0.41	0.41	0.389	0.38778	0.4314	0.3125	0.438	0.4312	0.3262	0.42	0.35	0.43	0.43	0.4226	0.45	1	T	0.001	B	0.001	B	0.061	N	1.000	P	-1.01	N	.	.	-0.921	T	0.000	T	0.011	-1.688	0.012	1.74	0.021	0.355	6.792	-1.688484	NA	0.7	0.447173	0.410433	NA	0.428	NA	4.5321604
1199	13	28642034	28642034	A	G	intronic	FLT3	NA	NA	NA	ncRNA_exonic	ENSG00000271026	NA	NA	NA	Score=259;Name=lod=15	NA	13q12.2	NA	NA	NA	NA	rs9513019	0.76	0.76	0.736	0.742212	0.8012	0.8284	0.7867	0.6029	0.7495	0.81	0.82	0.79	0.6	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.213593	NA	NA	NA	NA	NA	0.703	NA	4.5321333
1199	1	201013336	201013336	T	C	intronic	CACNA1S	NA	NA	NA	intronic	ENSG00000081248	NA	NA	NA	NA	NA	1q32.1	NA	Name=ZNF263,CTCF	NA	NA	rs2297906	0.53	0.53	0.543	0.508187	0.4682	0.4177	0.3818	0.829	0.2986	0.46	0.43	0.43	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.68007	1.68007	NA	NA	NA	NA	0.514	NA	4.5318
1199	6	73918987	73918987	C	T	intergenic	KCNQ5,KHDC1L	dist=10414;dist=14281	NA	NA	ncRNA_exonic	ENSG00000251360	NA	NA	NA	NA	NA	6q13	Score=677;Name=V$P53_01	NA	NA	NA	rs2350377	0.42	0.42	0.441	0.396765	0.4682	0.3621	0.3963	0.5008	0.2188	0.46	0.32	0.38	0.5	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.420276	1.420276	NA	NA	NA	NA	0.543	NA	4.5318
1199	12	102357893	102357893	G	T	intergenic	DRAM1,CCDC53	dist=40492;dist=48824	NA	NA	ncRNA_exonic	ENSG00000258288	NA	NA	NA	Score=530;Name=lod=190	NA	12q23.2	NA	NA	NA	NA	rs4764685	0.4	0.4	0.382	0.374601	0.4682	0.1081	0.5043	0.5189	0.2658	0.48	0.12	0.52	0.49	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.152377	NA	NA	NA	NA	NA	0.355	NA	4.5318
1199	1	9011627	9011627	G	A	intronic	CA6	NA	NA	NA	exonic	ENSG00000131686	NA	synonymous SNV	ENSG00000131686:ENST00000319474:exon3:c.G405A:p.T135T,ENSG00000131686:ENST00000480186:exon3:c.G405A:p.T135T	NA	NA	1p36.23	NA	NA	NA	NA	rs3765967	0.12	0.12	0.14	0.135783	0.1004	0.1726	0.0548	0.1619	0.1564	0.1	0.18	0.06	0.14	0.1041	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.97312	NA	NA	0.097187	0.144977	NA	0.123	NA	4.5316463
1199	5	149008403	149008403	A	G	exonic	ARHGEF37	NA	synonymous SNV	ARHGEF37:NM_001001669:exon12:c.A1692G:p.L564L	exonic	ENSG00000183111	NA	synonymous SNV	ENSG00000183111:ENST00000333677:exon12:c.A1692G:p.L564L	Score=422;Name=lod=69	NA	5q32	NA	NA	NA	NA	rs1056993	0.71	0.71	0.718	0.672125	0.7227	0.8363	0.549	0.5976	0.6391	0.73	0.84	0.61	0.61	0.6896	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.980326	NA	NA	0.722874	0.619941	ID=COSM449086;OCCURENCE=1(breast)	0.725	NA	4.5314926
1199	12	10525740	10525740	C	T	exonic	KLRC4-KLRK1,KLRK1	NA	synonymous SNV	KLRK1:NM_007360:exon8:c.G624A:p.T208T,KLRC4-KLRK1:NM_001199805:exon13:c.G624A:p.T208T	exonic	ENSG00000213809	NA	synonymous SNV	ENSG00000213809:ENST00000540818:exon7:c.G624A:p.T208T,ENSG00000213809:ENST00000240618:exon8:c.G624A:p.T208T	Score=381;Name=lod=47	NA	12p13.2	NA	NA	NA	NA	rs1049172	0.71	0.71	0.702	0.714457	0.7048	0.872	0.7723	0.4652	0.8579	0.7	0.89	0.74	0.5	0.7303	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.856138	NA	NA	0.700349	0.503404	NA	0.616	NA	4.5312176
1199	1	200965130	200965130	G	T	intronic	KIF21B	NA	NA	NA	intronic	ENSG00000116852	NA	NA	NA	NA	NA	1q32.1	NA	Name=CTCF	NA	NA	rs7531978	0.6	0.6	0.618	0.591454	0.4692	0.627	0.4669	0.8722	0.3896	0.46	0.65	0.47	0.85	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.015634	NA	NA	NA	NA	NA	0.594	NA	4.5308
1199	2	113953657	113953657	A	C	intronic	PSD4	NA	NA	NA	intronic	ENSG00000125637	NA	NA	NA	NA	NA	2q13	NA	Name=MafK_(ab50322),MafK_(SC-477),MafF_(M8194)	NA	NA	rs4849169	0.46	0.46	0.444	0.441094	0.4692	0.6508	0.5288	0.1838	0.4816	0.47	0.63	0.49	0.2	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.34113	NA	NA	NA	NA	NA	0.428	NA	4.5308
1199	15	85191274	85191274	C	G	intronic	WDR73	NA	NA	NA	intronic	ENSG00000177082	NA	NA	NA	NA	NA	15q25.2	NA	Name=TAL1_(SC-12984),PU.1	NA	NA	rs7169629	0.58	0.58	0.593	0.580072	0.4692	0.8026	0.5043	0.5386	0.5746	0.47	0.8	0.47	0.56	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.306301	NA	NA	NA	NA	NA	0.5	NA	4.5308
1199	10	20500592	20500592	T	C	intronic	PLXDC2	NA	NA	NA	intronic	ENSG00000120594	NA	NA	NA	Score=582;Name=lod=309	NA	10p12.31	NA	NA	NA	NA	rs16920092	0.28	0.28	0.285	0.277157	0.1402	0.4196	0.1787	0.4327	0.1309	0.14	0.42	0.15	0.43	0.1911	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.538374	2.538374	NA	0.138023	0.385611	NA	0.159	NA	4.530677
1199	6	105244526	105244526	A	T	intronic	HACE1	NA	NA	NA	intronic	ENSG00000085382	NA	NA	NA	Score=464;Name=lod=103	NA	6q16.3	NA	Name=MafF_(M8194),MafK_(ab50322)	NA	NA	rs6918700	0.55	0.55	0.545	0.558307	0.4831	0.4117	0.5259	0.8464	0.4202	0.51	0.41	0.53	0.79	0.5124	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.570612	NA	NA	0.473831	0.778711	NA	0.638	NA	4.530669
1199	9	115918306	115918306	G	A	intronic	SLC31A2	NA	NA	NA	intronic	ENSG00000136867	NA	NA	NA	NA	NA	9q32	NA	Name=YY1_(C-20),Max,YY1,c-Myc	Name=18	NA	rs10121117	0.4	0.4	0.412	0.386182	0.5169	0.1994	0.3977	0.4554	0.3425	0.52	0.23	0.41	0.41	0.4523	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.04711	NA	0	0.500502	0.453767	NA	0.428	NA	4.530298
1199	1	43352894	43352894	C	T	intergenic	ZNF691,SLC2A1	dist=34748;dist=38152	NA	NA	ncRNA_exonic	ENSG00000233708	NA	NA	NA	Score=588;Name=lod=328	NA	1p34.2	NA	NA	NA	NA	rs6600427	0.31	0.31	0.289	0.308107	0.4702	0.1925	0.2795	0.264	0.3405	0.47	0.18	0.31	0.23	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000354	NA	NA	NA	NA	NA	0.449	NA	4.5298
1199	5	167835766	167835766	T	C	intronic	WWC1	NA	NA	NA	intronic	ENSG00000113645	NA	NA	NA	NA	NA	5q34	NA	NA	Name=15	NA	rs6887919	0.63	0.63	0.638	0.641973	0.4702	0.7133	0.621	0.8396	0.4928	0.47	0.68	0.6	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.23588	NA	NA	NA	NA	NA	0.587	NA	4.5298
1199	6	63937537	63937537	T	C	intergenic	KHDRBS2,LGSN	dist=941437;dist=48319	NA	NA	ncRNA_exonic	ENSG00000219940	NA	NA	NA	Score=682;Name=lod=788	NA	6q12	NA	NA	NA	NA	rs9343866	0.46	0.46	0.438	0.467652	0.4702	0.4534	0.5101	0.438	0.4898	0.47	0.44	0.45	0.49	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.435358	NA	NA	NA	NA	NA	0.399	NA	4.5298
1199	13	111368316	111368316	C	T	exonic	ING1	NA	synonymous SNV	ING1:NM_005537:exon1:c.C526T:p.L176L	exonic	ENSG00000153487	NA	synonymous SNV	ENSG00000153487:ENST00000375774:exon1:c.C526T:p.L176L	NA	NA	13q34	NA	Name=TAF7_(SQ-8),Pol2,POU2F2,TAF1,CTCF,Oct-2,Pol2-4H8,Sin3Ak-20,TBP,CTCF_(C-20),NFKB,HEY1	NA	NA	rs9555726	0.6	0.6	0.584	0.58147	0.6909	0.7252	0.6816	0.23	0.7249	0.68	0.75	0.68	0.25	0.6955	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.556218	NA	NA	0.751075	0.392483	NA	0.507	NA	4.5291916
1199	2	130970911	130970911	A	G	intergenic	TUBA3E,CCDC115	dist=14877;dist=124905	NA	NA	ncRNA_exonic	ENSG00000230756	NA	NA	NA	Score=574;Name=lod=286	NA	2q21.1	NA	NA	NA	NA	rs12471586	0.5	0.5	0.479	0.535343	0.4712	0.5675	0.5821	0.5484	0.5174	0.43	0.53	0.54	0.52	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.232887	NA	NA	NA	NA	NA	0.138	NA	4.5288
1199	17	6653368	6653368	T	C	intergenic	SLC13A5,XAF1	dist=36628;dist=5788	NA	NA	ncRNA_exonic	ENSG00000244283	NA	NA	NA	Score=726;Name=lod=1188	NA	17p13.1	NA	NA	NA	NA	rs2005153	0.6	0.6	0.62	0.631989	0.4712	0.7351	0.4971	0.8086	0.5481	0.46	0.74	0.48	0.77	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.236399	NA	NA	NA	NA	NA	0.543	NA	4.5288
1199	17	42988959	42988959	T	C	intronic	GFAP	NA	NA	NA	intronic	ENSG00000131095	NA	NA	NA	NA	NA	17q21.31	NA	NA	NA	NA	rs2289671	0.45	0.45	0.453	0.420727	0.4712	0.3363	0.3761	0.5008	0.3793	0.47	0.37	0.43	0.51	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.069882	NA	NA	NA	NA	NA	0.333	CLINSIG=untested;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000056914.1;CLNDSDB=.;CLNDSDBID=.	4.5288
1199	17	19644472	19644472	A	T	exonic	ALDH3A1	NA	synonymous SNV	ALDH3A1:NM_001135168:exon5:c.T741A:p.P247P,ALDH3A1:NM_000691:exon6:c.T741A:p.P247P,ALDH3A1:NM_001135167:exon6:c.T741A:p.P247P	exonic	ENSG00000108602	NA	synonymous SNV	ENSG00000108602:ENST00000426645:exon5:c.T711A:p.P237P,ENSG00000108602:ENST00000457500:exon5:c.T741A:p.P247P,ENSG00000108602:ENST00000494157:exon5:c.T522A:p.P174P,ENSG00000108602:ENST00000225740:exon6:c.T741A:p.P247P,ENSG00000108602:ENST00000395555:exon6:c.T741A:p.P247P,ENSG00000108602:ENST00000439102:exon6:c.T741A:p.P247P,ENSG00000108602:ENST00000444455:exon6:c.T741A:p.P247P,ENSG00000108602:ENST00000468746:exon6:c.T741A:p.P247P	NA	NA	17p11.2	NA	NA	NA	NA	rs2072330	0.31	0.31	0.296	0.290735	0.3907	0.2956	0.3934	0.0923	0.3783	0.4	0.33	0.38	0.11	0.3549	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.029576	NA	NA	0.392558	0.12483	NA	0.283	NA	4.5285086
1199	19	43439694	43439694	A	G	exonic	PSG7	NA	unknown	UNKNOWN	exonic	ENSG00000221878	NA	unknown	UNKNOWN	NA	NA	19q13.31	NA	NA	NA	NA	rs113247044	0.14	0.14	0.117	0.139577	0.1531	0.0109	0.2277	0.1899	0.1278	0.15	0.04	0.2	0.2	0.1548	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.676828	NA	NA	0.163837	0.217401	NA	0.174	NA	4.528263
1199	4	100052733	100052733	C	A	exonic	ADH4	NA	synonymous SNV	ADH4:NM_000670:exon6:c.G765T:p.P255P	exonic	ENSG00000198099	NA	synonymous SNV	ENSG00000198099:ENST00000509471:exon2:c.G255T:p.P85P,ENSG00000198099:ENST00000265512:exon6:c.G765T:p.P255P,ENSG00000198099:ENST00000423445:exon6:c.G822T:p.P274P,ENSG00000198099:ENST00000505590:exon7:c.G822T:p.P274P,ENSG00000198099:ENST00000508393:exon7:c.G822T:p.P274P	Score=378;Name=lod=46	NA	4q23	NA	NA	NA	NA	rs1126670	0.82	0.82	0.836	0.847244	0.6978	0.999	0.7709	0.8608	0.8804	0.7	1	0.76	0.84	0.7565	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.188815	NA	NA	0.684302	0.822969	NA	0.739	NA	4.5280646
1199	17	8416901	8416901	C	T	exonic	MYH10	NA	synonymous SNV	MYH10:NM_005964:exon21:c.G2607A:p.T869T,MYH10:NM_001256095:exon22:c.G2634A:p.T878T,MYH10:NM_001256012:exon23:c.G2700A:p.T900T	exonic	ENSG00000133026	NA	synonymous SNV	ENSG00000133026:ENST00000269243:exon21:c.G2607A:p.T869T,ENSG00000133026:ENST00000379980:exon22:c.G2655A:p.T885T,ENSG00000133026:ENST00000396239:exon22:c.G2670A:p.T890T,ENSG00000133026:ENST00000360416:exon23:c.G2700A:p.T900T	NA	NA	17p13.1	NA	NA	NA	NA	rs11374	0.42	0.42	0.413	0.423323	0.3519	0.502	0.4323	0.3835	0.4632	0.36	0.49	0.38	0.46	0.4031	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.872311	NA	NA	0.383605	0.382433	ID=COSM1130107;OCCURENCE=1(prostate)	0.399	NA	4.5280616
1199	3	4025573	4025573	T	C	intergenic	LRRN1,SETMAR	dist=136186;dist=319415	NA	NA	ncRNA_exonic	ENSG00000229241	NA	NA	NA	Score=475;Name=lod=114	NA	3p26.1	NA	NA	NA	NA	rs9862263	0.31	0.31	0.299	0.275759	0.4722	0.1359	0.3314	0.2179	0.2566	0.49	0.15	0.37	0.2	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.889606	NA	NA	NA	NA	NA	0.348	NA	4.5278
1199	14	22054398	22054398	C	T	intergenic	OR10G3,OR10G2	dist=15523;dist=47668	NA	NA	ncRNA_exonic	ENSG00000256081	NA	NA	NA	Score=815;Name=lod=2727	NA	14q11.2	NA	NA	NA	NA	rs8022134	0.51	0.51	0.52	0.505192	0.4722	0.5893	0.4222	0.5265	0.4826	0.47	0.63	0.43	0.5	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.030245	NA	NA	NA	NA	NA	0.464	NA	4.5278
1199	14	52781195	52781195	G	A	UTR5	PTGER2	NM_000956:c.-72G>A	NA	NA	UTR5	ENSG00000125384	ENST00000557436:c.-837G>A,ENST00000245457:c.-72G>A	NA	NA	NA	NA	14q22.1	NA	Name=HA-E2F1	NA	NA	rs1254598	0.53	0.53	0.555	0.48103	0.8062	0.372	0.5548	0.3396	0.3978	0.79	0.35	0.57	0.32	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.929866	NA	NA	NA	NA	NA	0.42	NA	4.5271334
1199	9	139686357	139686357	T	C	intronic	TMEM141	NA	NA	NA	intronic	ENSG00000244187	NA	NA	NA	NA	NA	9q34.3	NA	Name=Rad21,CTCF,Znf143_(16618-1-AP),TAF7_(SQ-8),YY1_(C-20),SMC3_(ab9263),SP1,CTCF_(C-20),ZEB1_(SC-25388),TCF12,USF-1,CTCF_(SC-5916)	Name=71	NA	rs2784042	0.48	0.48	0.45	0.515974	0.4662	0.2659	0.5764	0.7095	0.5204	0.48	0.23	0.54	0.71	0.5061	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4759	NA	NA	0.500581	0.6532	NA	0.464	NA	4.527119
1199	1	4834606	4834606	T	C	UTR3	AJAP1	NM_018836:c.*47T>C,NM_001042478:c.*47T>C	NA	NA	UTR3	ENSG00000196581	ENST00000378190:c.*47T>C,ENST00000378191:c.*47T>C	NA	NA	Score=663;Name=lod=660	NA	1p36.32	NA	NA	NA	NA	rs389959	0.16	0.16	0.163	0.158746	0.2674	0.0486	0.1758	0.1483	0.1626	0.27	0.02	0.19	0.14	0.2282	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4616	NA	NA	0.310698	0.172719	NA	0.152	NA	4.5270354
1199	17	42984687	42984687	G	C	UTR3	GFAP	NM_002055:c.*28C>G	NA	NA	UTR3	ENSG00000131095	ENST00000253408:c.*28C>G,ENST00000588735:c.*28C>G	NA	NA	NA	NA	17q21.31	NA	NA	NA	NA	rs11558961	0.26	0.26	0.244	0.24381	0.2624	0.251	0.2291	0.2307	0.2454	0.27	0.28	0.26	0.21	0.267	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.857435	NA	NA	0.276977	0.237404	NA	0.167	CLINSIG=untested;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000056816.1;CLNDSDB=.;CLNDSDBID=.	4.5269564
1199	14	39196641	39196641	T	C	intergenic	CLEC14A,LINC00639	dist=471066;dist=21902	NA	NA	ncRNA_exonic	ENSG00000258948	NA	NA	NA	Score=715;Name=lod=1073	NA	14q21.1	NA	NA	NA	NA	rs12880789	0.53	0.53	0.512	0.510583	0.4732	0.4018	0.487	0.7474	0.3579	0.46	0.45	0.53	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.88771	NA	NA	NA	NA	NA	0.551	NA	4.5268
1199	1	16890671	16890671	T	C	exonic	NBPF1	NA	unknown	UNKNOWN	exonic	ENSG00000219481	NA	nonsynonymous SNV	ENSG00000219481:ENST00000430580:exon29:c.A3187G:p.M1063V	NA	NA	1p36.13	NA	NA	NA	NA	rs2419526	NA	NA	0.506	0.546126	0.5885	0.5169	0.5591	0.5091	0.5736	NA	NA	NA	NA	0.5523	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.466702	NA	0.19	NA	NA	NA	NA	NA	4.5258667
1199	13	50935593	50935593	C	T	intergenic	ST13P4,DLEU7	dist=187842;dist=351166	NA	NA	ncRNA_exonic	ENSG00000223676	NA	NA	NA	Score=673;Name=lod=724	NA	13q14.3	NA	NA	NA	NA	rs2812215	0.37	0.37	0.349	0.356629	0.4742	0.254	0.3199	0.329	0.4049	0.49	0.23	0.36	0.33	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.476124	NA	NA	NA	NA	NA	0.406	NA	4.5258
1199	15	76084875	76084875	C	T	intergenic	MIR4313,UBE2Q2	dist=30219;dist=50747	NA	NA	ncRNA_exonic	ENSG00000261820	NA	NA	NA	Score=649;Name=lod=579	NA	15q24.2	NA	NA	NA	NA	rs12708521	0.39	0.39	0.374	0.357628	0.4742	0.2411	0.3948	0.4183	0.2495	0.46	0.28	0.41	0.38	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.072653	NA	NA	NA	NA	NA	0.319	NA	4.5258
1199	21	42817612	42817612	G	A	intronic	MX1	NA	NA	NA	intronic	ENSG00000157601	NA	NA	NA	NA	NA	21q22.3	NA	Name=Pol2,Pol2-4H8	NA	NA	rs469382	0.22	0.22	0.197	0.19349	0.4742	0.0069	0.2709	0.0378	0.2526	0.46	0.0017	0.28	0.05	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.306849	NA	NA	NA	NA	NA	0.254	NA	4.5258
1199	14	22314877	22314877	T	C	intergenic	OR4E2,DAD1	dist=180639;dist=718930	NA	NA	UTR5	ENSG00000211786	ENST00000390434:c.-67T>C	NA	NA	NA	NA	14q11.2	NA	Name=CTCF	NA	NA	rs9635202	0.27	0.27	0.262	0.28115	0.1481	0.372	0.2493	0.3064	0.3129	0.15	0.41	0.23	0.33	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.537819	NA	NA	0.159648	0.281069	NA	0.232	NA	4.5255854
1199	2	113875565	113875565	A	G	UTR5	IL1RN	NM_000577:c.-31A>G,NM_173843:c.-9739A>G,NM_173841:c.-31A>G	NA	NA	UTR5	ENSG00000136689	ENST00000361779:c.-9739A>G,ENST00000354115:c.-31A>G,ENST00000259206:c.-31A>G	NA	NA	NA	NA	2q13	NA	Name=Pol2	NA	NA	rs2234678	0.18	0.18	0.146	0.185903	0.2903	0.1091	0.3213	0.0174	0.2894	0.29	0.09	0.31	0.02	0.2448	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.55557	NA	NA	0.272674	0.052429	NA	0.239	NA	4.5255594
1199	10	42833104	42833104	G	A	ncRNA_exonic	LOC441666	NA	NA	NA	ncRNA_exonic	ENSG00000215146	NA	NA	NA	NA	NA	10q11.21	NA	NA	NA	NA	rs12262497	0.19	0.19	0.202	0.207668	0.1412	0.2202	0.1196	0.3313	0.1585	0.13	0.21	0.15	0.28	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.013686	NA	NA	NA	NA	NA	0.217	NA	4.5254666
1199	4	186423655	186423655	G	A	intronic	PDLIM3	NA	NA	NA	intronic	ENSG00000154553	NA	NA	NA	NA	NA	4q35.1	NA	NA	Name=4	NA	rs12644280	0.15	0.15	0.132	0.139177	0.1581	0.3085	0.1527	0.0182	0.0992	0.16	0.26	0.14	0.02	0.1563	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.535246	NA	NA	0.160233	0.04108	ID=COSN167380;OCCURENCE=1(large_intestine)	0.138	NA	4.525367
1199	2	113875584	113875584	G	C	UTR5	IL1RN	NM_000577:c.-12G>C,NM_173843:c.-9720G>C,NM_173841:c.-12G>C	NA	NA	UTR5	ENSG00000136689	ENST00000361779:c.-9720G>C,ENST00000354115:c.-12G>C,ENST00000259206:c.-12G>C	NA	NA	NA	NA	2q13	NA	Name=Pol2	NA	NA	rs2234679	0.18	0.18	0.147	0.185903	0.2903	0.1091	0.3213	0.0174	0.2894	0.29	0.09	0.31	0.02	0.2448	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.147954	NA	NA	0.272907	0.052429	NA	0.239	NA	4.5253264
1199	19	5277888	5277888	C	G	intronic	PTPRS	NA	NA	NA	ncRNA_exonic	ENSG00000239524	NA	NA	NA	Score=722;Name=lod=1144	NA	19p13.3	NA	NA	NA	NA	rs7250190	0.74	0.74	0.765	0.727835	0.8082	0.6935	0.6153	0.82	0.636	0.8	0.68	0.65	0.81	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.309884	NA	NA	NA	NA	NA	0.754	NA	4.5251333
1200	7	97935671	97935671	C	G	intronic	BAIAP2L1	NA	NA	NA	intronic	ENSG00000006453,ENSG00000164713	NA	NA	NA	NA	NA	7q21.3	NA	NA	Name=9	NA	rs13232181	0.35	0.35	0.342	0.290735	0.4751	0.2629	0.353	0.2368	0.1585	0.47	0.24	0.38	0.28	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.875826	NA	NA	NA	NA	NA	0.268	NA	4.5249
1200	14	91928992	91928992	T	G	intronic	SMEK1	NA	NA	NA	intronic	ENSG00000100796	NA	NA	NA	NA	NA	14q32.12	NA	NA	Name=4	NA	rs5020186	0.52	0.52	0.512	0.492412	0.4751	0.5159	0.5029	0.5265	0.4325	0.5	0.52	0.49	0.57	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.151299	NA	NA	NA	NA	NA	0.442	NA	4.5249
1200	21	37660268	37660268	A	G	intronic	DOPEY2	NA	NA	NA	intronic	ENSG00000142197	NA	NA	NA	NA	NA	21q22.12	NA	NA	Name=3	NA	rs74949130	0.19	0.19	0.167	0.197284	0.163	0.3542	0.1297	0.1415	0.1943	0.17	0.32	0.13	0.13	0.1618	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.091581	NA	NA	0.150465	0.147072	NA	0.094	NA	4.524735
1200	7	142197613	142197613	T	C	intergenic	LOC730441,MTRNR2L6	dist=225545;dist=176518	NA	NA	ncRNA_exonic	ENSG00000241657	NA	NA	NA	NA	NA	7q34	NA	NA	Name=6	NA	rs376535639	NA	NA	0.236	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4754	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.082813	NA	NA	NA	NA	NA	NA	NA	4.5246
1200	13	97537775	97537775	T	C	intergenic	HS6ST3,LINC00359	dist=45959;dist=55760	NA	NA	ncRNA_exonic	ENSG00000235137	NA	NA	NA	Score=879;Name=lod=4968	NA	13q32.1	NA	NA	NA	NA	rs1854848	0.52	0.52	0.507	0.545327	0.4761	0.3601	0.5605	0.8154	0.4315	0.46	0.32	0.55	0.8	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.008571	NA	NA	NA	NA	NA	0.652	NA	4.5239
1200	13	97537864	97537864	G	A	intergenic	HS6ST3,LINC00359	dist=46048;dist=55671	NA	NA	ncRNA_exonic	ENSG00000235137	NA	NA	NA	Score=668;Name=lod=692	NA	13q32.1	NA	NA	NA	NA	rs1360438	0.53	0.53	0.54	0.558906	0.4761	0.3601	0.5634	0.8646	0.4325	0.46	0.32	0.56	0.85	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.611856	NA	NA	NA	NA	NA	0.674	NA	4.5239
1200	22	21424385	21424385	G	A	intergenic	LOC400891,BCRP2	dist=5928;dist=32920	NA	NA	ncRNA_exonic	ENSG00000249680	NA	NA	NA	Score=439;Name=lod=81	NA	22q11.21	NA	NA	NA	NA	rs383306	0.3	0.3	0.285	0.289337	0.4761	0.1111	0.3213	0.2133	0.3609	0.48	0.1	0.35	0.23	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.447734	NA	NA	NA	NA	NA	0.362	NA	4.5239
1200	3	10107520	10107520	G	T	intronic	FANCD2	NA	NA	NA	intronic	ENSG00000144554	NA	NA	NA	NA	NA	3p25.3	NA	Name=FOXA1_(C-20),GATA3_(SC-268)	NA	NA	rs34608006	0.18	0.18	0.149	0.175319	0.1402	0.0476	0.1599	0.3396	0.1319	0.15	0.07	0.18	0.34	0.1729	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.527516	1.527516	NA	0.163177	0.3064	NA	0.304	NA	4.523723
1200	17	79827163	79827163	C	T	intronic	ARHGDIA	NA	NA	NA	intronic	ENSG00000141522	NA	NA	NA	NA	NA	17q25.3	NA	NA	Name=135	NA	rs113301975	0.13	0.13	0.096	0.10623	0.1531	0.1012	0.2161	0.0461	0.0665	0.16	0.12	0.19	0.06	0.1494	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.253123	NA	NA	0.175006	0.066954	NA	0.145	NA	4.522494
1200	6	397290	397290	T	C	intronic	IRF4	NA	NA	NA	intronic	ENSG00000137265	NA	NA	NA	NA	NA	6p25.3	NA	Name=POU2F2,Pol2,Pol2-4H8,Oct-2	NA	NA	rs1775589	0.31	0.31	0.288	0.320288	0.1461	0.5169	0.2983	0.329	0.3006	0.15	0.52	0.28	0.34	0.2092	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.796972	NA	NA	0.122558	0.299138	NA	0.268	NA	4.522142
1200	7	4189075	4189075	G	C	exonic	SDK1	NA	synonymous SNV	SDK1:NM_001079653:exon4:c.G66C:p.A22A,SDK1:NM_152744:exon30:c.G4605C:p.A1535A	exonic	ENSG00000146555	NA	synonymous SNV	ENSG00000146555:ENST00000389531:exon30:c.G4605C:p.A1535A,ENSG00000146555:ENST00000404826:exon30:c.G4605C:p.A1535A	Score=422;Name=lod=69	NA	7p22.2	NA	NA	NA	NA	rs659182	0.78	0.78	0.773	0.786542	0.6918	0.7817	0.7738	0.9592	0.6646	0.7	0.75	0.77	0.96	0.759	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.534717	NA	NA	0.693837	0.927372	NA	0.812	NA	4.5220296
1200	20	4713176	4713176	A	G	ncRNA_exonic	PRNT	NA	NA	NA	exonic	ENSG00000180259	NA	synonymous SNV	ENSG00000180259:ENST00000326539:exon2:c.T147C:p.H49H,ENSG00000180259:ENST00000418528:exon2:c.T147C:p.H49H,ENSG00000180259:ENST00000423718:exon2:c.T147C:p.H49H	NA	NA	20p13	NA	NA	NA	NA	rs2735677	0.27	0.27	0.266	0.27496	0.1998	0.371	0.2147	0.2935	0.271	0.2	0.38	0.25	0.28	0.2337	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.544669	NA	NA	0.211163	0.256468	NA	0.181	NA	4.5220036
1200	5	172189805	172189805	T	C	intergenic	NEURL1B,DUSP1	dist=71272;dist=5288	NA	NA	ncRNA_exonic	ENSG00000213386	NA	NA	NA	Score=730;Name=lod=1240	NA	5q35.1	NA	NA	NA	NA	rs322355	NA	NA	0.385	0.441094	0.4781	0.5357	0.438	0.3661	0.409	NA	NA	NA	NA	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.166205	NA	NA	NA	NA	NA	0.341	NA	4.5219
1200	6	10514698	10514698	C	T	intergenic	MIR5689,GCNT2	dist=74671;dist=6870	NA	NA	ncRNA_exonic	ENSG00000216359,ENSG00000237685	NA	NA	NA	Score=278;Name=lod=18	NA	6p24.3	NA	NA	NA	NA	rs511871	0.57	0.57	0.554	0.579473	0.4781	0.6508	0.5259	0.5726	0.6575	0.49	0.67	0.51	0.64	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.665671	NA	NA	NA	NA	NA	0.486	NA	4.5219
1200	21	42809206	42809206	A	C	intronic	MX1	NA	NA	NA	intronic	ENSG00000157601	NA	NA	NA	NA	NA	21q22.3	NA	Name=Pol2-4H8	NA	NA	rs468646	0.25	0.25	0.224	0.232228	0.4781	0.0099	0.2882	0.1694	0.2536	0.47	0.0017	0.31	0.18	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.112046	NA	NA	NA	NA	NA	0.304	NA	4.5219
1200	2	160086692	160086692	A	G	exonic	TANC1	NA	synonymous SNV	TANC1:NM_033394:exon27:c.A4755G:p.T1585T	exonic	ENSG00000115183	NA	synonymous SNV	ENSG00000115183:ENST00000454300:exon25:c.A4437G:p.T1479T,ENSG00000115183:ENST00000263635:exon27:c.A4755G:p.T1585T	NA	NA	2q24.2	NA	NA	NA	NA	rs3821296	0.46	0.46	0.419	0.478834	0.3718	0.6161	0.6023	0.3495	0.5348	0.37	0.62	0.54	0.37	0.4259	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.321557	NA	NA	0.347168	0.352023	NA	0.391	NA	4.5217986
1200	11	62293948	62293948	G	A	exonic	AHNAK	NA	synonymous SNV	AHNAK:NM_001620:exon5:c.C7941T:p.S2647S	exonic	ENSG00000124942	NA	synonymous SNV	ENSG00000124942:ENST00000378024:exon5:c.C7941T:p.S2647S	Score=537;Name=lod=203	NA	11q12.3	NA	NA	NA	NA	rs486903	0.47	0.47	0.419	0.473043	0.7366	0.3046	0.6715	0.0779	0.7689	0.76	0.29	0.65	0.08	0.6638	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.829206	NA	NA	0.744941	0.193915	ID=COSM147262;OCCURENCE=1(stomach)	0.543	NA	4.5213256
1200	6	29857473	29857473	C	T	ncRNA_intronic	HLA-H	NA	NA	NA	ncRNA_intronic	ENSG00000206341	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs9259257	0.07	0.07	0.09	0.0988419	0.0696	0.1131	0.0735	0.0764	0.1626	0.06	0.1	0.07	0.07	0.0761	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.152233	NA	NA	NA	NA	NA	NA	NA	4.5209666
1200	5	118988306	118988306	C	T	intergenic	FAM170A,PRR16	dist=16789;dist=811713	NA	NA	ncRNA_exonic	ENSG00000250895	NA	NA	NA	Score=787;Name=lod=2111	NA	5q23.1	NA	NA	NA	NA	rs170646	0.59	0.59	0.588	0.602037	0.4791	0.628	0.5	0.7352	0.5941	0.49	0.65	0.53	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.096876	NA	NA	NA	NA	NA	0.507	NA	4.5209
1200	10	52486792	52486792	G	A	intergenic	SGMS1,ASAH2B	dist=103055;dist=12896	NA	NA	ncRNA_exonic	ENSG00000213667	NA	NA	NA	Score=775;Name=lod=1882	NA	10q11.23	NA	NA	NA	NA	rs10994179	0.41	0.41	0.367	0.366214	0.4791	0.4306	0.611	0.1293	0.3303	0.49	0.42	0.6	0.12	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.140412	NA	NA	NA	NA	NA	0.449	NA	4.5209
1200	19	43349340	43349340	C	A	ncRNA_exonic	PSG10P	NA	NA	NA	ncRNA_exonic	ENSG00000248257	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs3859463	0.09	0.09	0.046	0.124002	0.1461	0.003	0.2219	0.1475	0.1247	0.1	0.0035	0.17	0.13	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.033685	NA	NA	NA	NA	NA	NA	NA	4.5205666
1200	19	43349341	43349341	G	A	ncRNA_exonic	PSG10P	NA	NA	NA	ncRNA_exonic	ENSG00000248257	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs3859464	0.09	0.09	0.052	0.124002	0.1461	0.003	0.2219	0.1475	0.1247	0.1	0.0035	0.17	0.13	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.420084	NA	NA	NA	NA	NA	NA	NA	4.5205666
1200	22	42906679	42906679	C	G	ncRNA_exonic	SERHL	NA	NA	NA	ncRNA_exonic	ENSG00000172250	NA	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs1060166	0.09	0.09	0.059	0.076278	0.1461	0.003	0.1787	0.0575	0.0327	0.14	0.0017	0.19	0.04	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.314963	NA	NA	NA	NA	NA	0.167	NA	4.5205666
1200	22	24086107	24086107	A	G	exonic	ZNF70	NA	synonymous SNV	ZNF70:NM_021916:exon2:c.T1221C:p.I407I	exonic	ENSG00000187792	NA	synonymous SNV	ENSG00000187792:ENST00000341976:exon2:c.T1221C:p.I407I	NA	NA	22q11.23	NA	NA	NA	NA	rs5759985	0.54	0.54	0.56	0.55651	0.3579	0.6865	0.4006	0.7927	0.4182	0.35	0.68	0.4	0.79	0.4259	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.158169	NA	NA	0.362326	0.740354	NA	0.536	NA	4.5205406
1200	14	58734282	58734282	G	C	ncRNA_intronic	FLJ31306	NA	NA	NA	ncRNA_intronic	ENSG00000257621,ENSG00000258682	NA	NA	NA	NA	NA	14q23.1	NA	NA	NA	NA	rs35846334	0.02	0.02	0.012	0.0183706	0.0527	NA	0.0331	0.0015	0.0143	0.05	NA	0.04	NA	0.0424	0.051	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.618256	NA	NA	0.051144	0.009327	NA	0.036	NA	4.5204226
1200	1	236449502	236449502	A	G	intergenic	ERO1LB,EDARADD	dist=4163;dist=108178	NA	NA	ncRNA_exonic	ENSG00000237922	NA	NA	NA	Score=488;Name=lod=128	NA	1q42.3	NA	NA	NA	NA	rs576151	0.37	0.37	0.371	0.384185	0.4801	0.1438	0.4481	0.4024	0.4632	0.48	0.16	0.47	0.39	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.490734	NA	NA	NA	NA	NA	0.42	NA	4.5199
1200	8	145623963	145623963	G	A	exonic	CPSF1	NA	synonymous SNV	CPSF1:NM_013291:exon18:c.C1704T:p.D568D	exonic	ENSG00000071894	NA	synonymous SNV	ENSG00000071894:ENST00000349769:exon18:c.C1704T:p.D568D	NA	NA	8q24.3	NA	NA	NA	NA	rs4317614	0.43	0.43	0.42	0.459065	0.3668	0.6597	0.5	0.2383	0.6166	0.35	0.65	0.49	0.24	0.4228	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.046275	NA	NA	0.357326	0.26532	NA	0.362	NA	4.5197406
1200	8	141559358	141559358	G	A	exonic	AGO2	NA	synonymous SNV	AGO2:NM_001164623:exon12:c.C1443T:p.A481A,AGO2:NM_012154:exon12:c.C1443T:p.A481A	exonic	ENSG00000123908	NA	synonymous SNV	ENSG00000123908:ENST00000220592:exon12:c.C1443T:p.A481A,ENSG00000123908:ENST00000519980:exon12:c.C1443T:p.A481A	NA	NA	8q24.3	NA	NA	NA	NA	rs2292781	0.44	0.44	0.426	0.472444	0.3429	0.5942	0.4856	0.4546	0.4949	0.34	0.59	0.48	0.4	0.4231	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.981964	NA	NA	0.38093	0.429382	NA	0.457	NA	4.5197366
1200	19	43349482	43349482	A	G	ncRNA_intronic	PSG10P	NA	NA	NA	ncRNA_intronic	ENSG00000248257	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs1974521	0.12	0.12	0.098	0.140575	0.1471	0.003	0.2378	0.2005	0.1258	0.12	0.0035	0.2	0.19	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.273012	NA	NA	NA	NA	NA	0.188	NA	4.5195666
1200	9	27455585	27455585	G	A	UTR5	MOB3B	NM_024761:c.-37C>T	NA	NA	UTR5	ENSG00000120162	ENST00000262244:c.-37C>T	NA	NA	Score=431;Name=lod=75	NA	9p21.2	Score=941;Name=V$CETS1P54_01	NA	NA	NA	rs10757661	0.6	0.6	0.636	0.625599	0.6292	0.6091	0.6326	0.6838	0.5552	0.58	0.58	0.57	0.66	0.6279	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.631933	2.631933	NA	0.55686	0.643668	NA	0.543	NA	4.5193734
1200	2	54714066	54714066	A	G	intronic	SPTBN1	NA	NA	NA	intronic	ENSG00000115306	NA	NA	NA	NA	NA	2p16.2	NA	NA	Name=12	NA	rs4671942	0.62	0.62	0.614	0.648962	0.4811	0.626	0.611	0.8585	0.589	0.49	0.62	0.59	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.916958	NA	NA	NA	NA	NA	0.638	NA	4.5189
1200	12	6588972	6588972	A	C	intergenic	VAMP1,MRPL51	dist=9129;dist=12344	NA	NA	ncRNA_exonic	ENSG00000256913	NA	NA	NA	Score=581;Name=lod=307	NA	12p13.31	NA	NA	NA	NA	rs2532514	0.53	0.53	0.51	0.525759	0.4811	0.7847	0.438	0.3971	0.5409	0.48	0.79	0.44	0.36	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.541845	NA	NA	NA	NA	NA	0.478	NA	4.5189
1200	7	134879830	134879830	G	A	exonic	WDR91	NA	synonymous SNV	WDR91:NM_014149:exon9:c.C1251T:p.D417D	exonic	ENSG00000105875	NA	synonymous SNV	ENSG00000105875:ENST00000344400:exon9:c.C1251T:p.D417D,ENSG00000105875:ENST00000354475:exon9:c.C1251T:p.D417D,ENSG00000105875:ENST00000423565:exon9:c.C1146T:p.D382D	Score=444;Name=lod=85	NA	7q33	NA	NA	NA	NA	rs292575	0.66	0.66	0.629	0.655751	0.7078	0.6131	0.804	0.497	0.7556	0.72	0.59	0.8	0.53	0.7169	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.110277	NA	0.25	0.723256	0.550613	NA	0.703	NA	4.5187106
1200	5	168620435	168620435	C	A	intronic	SLIT3	NA	NA	NA	intronic	ENSG00000184347	NA	NA	NA	NA	NA	5q35.1	NA	NA	Name=2	NA	rs11744813	0.22	0.22	0.185	0.198682	0.1441	0.4464	0.2277	0.0779	0.1421	0.15	0.45	0.19	0.07	0.1899	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.466841	NA	NA	0.147326	0.096913	ID=COSN167639;OCCURENCE=1(large_intestine)	0.101	NA	4.518674
1200	6	24405357	24405357	A	G	intronic	MRS2	NA	NA	NA	intronic	ENSG00000124532	NA	NA	NA	NA	NA	6p22.3	NA	Name=USF-1	NA	NA	rs2273606	0.13	0.13	0.128	0.113419	0.1938	0.1488	0.0965	0.0038	0.1544	0.2	0.16	0.09	0.01	0.1444	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.329466	NA	NA	0.14314	0.029959	ID=COSN167704;OCCURENCE=1(large_intestine)	0.094	NA	4.51866
1200	7	142197606	142197606	T	C	intergenic	LOC730441,MTRNR2L6	dist=225538;dist=176525	NA	NA	ncRNA_exonic	ENSG00000241657	NA	NA	NA	NA	NA	7q34	NA	NA	Name=6	NA	rs373222208	NA	NA	0.262	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4814	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.712951	NA	NA	NA	NA	NA	NA	NA	4.5186
1200	17	30367396	30367396	G	A	ncRNA_exonic	SH3GL1P1	NA	NA	NA	ncRNA_exonic	ENSG00000266777	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs72825748	0.07	0.07	0.071	0.0734824	0.1481	NA	0.0807	0.0061	0.1585	0.15	NA	0.08	0.01	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.332193	NA	NA	NA	NA	NA	0.145	NA	4.5185666
1200	1	225611661	225611661	C	T	exonic	LBR	NA	synonymous SNV	LBR:NM_002296:exon2:c.G117A:p.V39V,LBR:NM_194442:exon2:c.G117A:p.V39V	exonic	ENSG00000143815	NA	synonymous SNV	ENSG00000143815:ENST00000272163:exon2:c.G117A:p.V39V,ENSG00000143815:ENST00000338179:exon2:c.G117A:p.V39V,ENSG00000143815:ENST00000421383:exon2:c.G117A:p.V39V,ENSG00000143815:ENST00000425080:exon2:c.G117A:p.V39V	Score=449;Name=lod=89	NA	1q42.12	NA	NA	NA	NA	rs1056607	0.73	0.73	0.69	0.657149	0.7058	0.744	0.7839	0.6286	0.4663	0.71	0.78	0.77	0.66	0.7112	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.284182	1.284182	NA	0.731279	0.635951	NA	0.674	NA	4.5183876
1200	3	183801557	183801557	T	C	intergenic	HTR3C,HTR3E	dist=23096;dist=13295	NA	NA	ncRNA_exonic	ENSG00000233576	NA	NA	NA	Score=478;Name=lod=117	NA	3q27.1	NA	NA	NA	NA	rs9845948	0.58	0.58	0.58	0.544728	0.4821	0.7312	0.5346	0.6014	0.3476	0.48	0.74	0.56	0.55	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.944216	NA	NA	NA	NA	NA	0.551	NA	4.5179
1200	10	6504126	6504126	T	C	intronic	PRKCQ	NA	NA	NA	intronic	ENSG00000065675	NA	NA	NA	NA	NA	10p15.1	NA	NA	Name=20	NA	rs604663	0.47	0.47	0.466	0.430112	0.4821	0.5169	0.4035	0.3903	0.3599	0.48	0.54	0.38	0.44	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.264808	NA	NA	NA	NA	NA	0.449	NA	4.5179
1200	10	6504136	6504136	C	G	intronic	PRKCQ	NA	NA	NA	intronic	ENSG00000065675	NA	NA	NA	NA	NA	10p15.1	NA	NA	Name=20	NA	rs678304	0.47	0.47	0.47	0.429912	0.4821	0.5169	0.402	0.3903	0.3599	0.48	0.54	0.38	0.44	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.101561	NA	NA	NA	NA	NA	0.449	NA	4.5179
1200	2	90121926	90121926	G	T	intergenic	MIR4436A,LOC654342	dist=1009958;dist=1702783	NA	NA	exonic	ENSG00000242766	NA	nonsynonymous SNV	ENSG00000242766:ENST00000483379:exon2:c.G144T:p.R48S	NA	NA	2p11.2	NA	NA	NA	NA	rs1852249	NA	NA	0.135	0.24381	0.1054	0.2579	0.2161	0.354	0.2423	NA	NA	NA	NA	0.2103	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.03632	NA	NA	NA	NA	ID=COSN166182;OCCURENCE=1(breast)	NA	NA	4.5176334
1200	19	54754865	54754865	A	G	intronic	LILRB5	NA	NA	NA	exonic	ENSG00000105609	NA	synonymous SNV	ENSG00000105609:ENST00000450632:exon13:c.T1770C:p.L590L	NA	NA	19q13.42	NA	NA	NA	NA	rs62133136	0.1	0.1	0.078	0.0890575	0.1759	0.0129	0.1643	0.0287	0.1063	0.17	0.01	0.2	0.02	0.1398	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.361065	NA	NA	NA	NA	NA	0.036	NA	4.5176333
1200	2	79364374	79364374	C	G	ncRNA_exonic	REG1P	NA	NA	NA	ncRNA_exonic	ENSG00000204787	NA	NA	NA	NA	NA	2p12	NA	NA	NA	NA	rs11678299	0.14	0.14	0.117	0.120008	0.1491	0.1935	0.1599	0.034	0.1022	0.16	0.2	0.14	0.03	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.197586	NA	NA	NA	NA	ID=COSN166148;OCCURENCE=1(breast)	0.13	NA	4.5175666
1200	2	79364397	79364397	G	A	ncRNA_exonic	REG1P	NA	NA	NA	ncRNA_exonic	ENSG00000204787	NA	NA	NA	NA	NA	2p12	NA	NA	NA	NA	rs3819317	0.14	0.14	0.115	0.11861	0.1491	0.1925	0.1585	0.034	0.0971	0.16	0.2	0.14	0.03	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.551068	NA	NA	NA	NA	ID=COSN166149;OCCURENCE=1(breast)	0.123	NA	4.5175666
1200	6	30573842	30573842	T	C	intronic	PPP1R10	NA	NA	NA	intronic	ENSG00000204569	NA	NA	NA	NA	NA	6p21.33	NA	NA	Name=6	NA	rs9262122	0.11	0.11	0.088	0.109425	0.1769	0.0605	0.1527	0.0091	0.1953	0.18	0.08	0.14	0.02	0.15	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.904507	NA	NA	0.15593	0.029732	NA	0.094	NA	4.51717
1200	22	46790029	46790029	G	T	intronic	CELSR1	NA	NA	NA	intronic	ENSG00000075275	NA	NA	NA	NA	NA	22q13.31	NA	NA	Name=3	NA	rs11703679	0.24	0.24	0.281	0.268371	0.1571	0.0129	0.1369	0.7307	0.1145	0.15	0.01	0.15	0.72	0.1761	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.886999	NA	NA	0.149884	0.657512	NA	0.254	NA	4.516916
1200	1	9171238	9171238	G	T	intronic	GPR157	NA	NA	NA	intronic	ENSG00000180758	NA	NA	NA	NA	NA	1p36.23	NA	Name=ZNF263,GATA-2	NA	NA	rs12135666	0.17	0.17	0.142	0.147364	0.2137	0.1915	0.268	0.0113	0.1319	0.22	0.19	0.24	0.02	0.2697	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.468104	NA	NA	NA	NA	NA	0.152	NA	4.5166
1200	3	146177815	146177815	C	T	exonic	PLSCR2	NA	synonymous SNV	PLSCR2:NM_001199979:exon2:c.G84A:p.Q28Q,PLSCR2:NM_001199978:exon4:c.G96A:p.Q32Q	exonic	ENSG00000163746	NA	synonymous SNV	ENSG00000163746:ENST00000497985:exon4:c.G96A:p.Q32Q	NA	NA	3q24	NA	NA	NA	NA	rs6806535	0.52	0.52	0.503	0.527556	0.5636	0.6062	0.5865	0.2625	0.726	0.57	0.62	0.55	0.29	0.5865	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.544962	NA	NA	NA	NA	NA	0.536	NA	4.5165666
1200	19	43351852	43351852	T	G	ncRNA_intronic	PSG10P	NA	NA	NA	ncRNA_intronic	ENSG00000248257	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs58312895	0.13	0.13	NA	0.140176	0.1501	0.003	0.2378	0.1967	0.1258	0.14	0.0017	0.2	0.2	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.517037	NA	NA	NA	NA	NA	NA	NA	4.5165666
1200	19	43351853	43351853	G	A	ncRNA_intronic	PSG10P	NA	NA	NA	ncRNA_intronic	ENSG00000248257	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs61209097	0.13	0.13	NA	0.140176	0.1501	0.003	0.2378	0.1967	0.1258	0.14	0.0017	0.2	0.2	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.785432	NA	NA	NA	NA	NA	NA	NA	4.5165666
1200	19	43352117	43352117	T	C	ncRNA_intronic	PSG10P	NA	NA	NA	ncRNA_intronic	ENSG00000248257	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs60911559	0.14	0.14	0.088	0.1248	0.1501	0.003	0.2262	0.1445	0.1258	0.16	0.0017	0.22	0.2	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.453556	NA	NA	NA	NA	NA	0.08	NA	4.5165666
1200	19	43352212	43352212	A	T	ncRNA_intronic	PSG10P	NA	NA	NA	ncRNA_exonic	ENSG00000248257	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs60236304	0.14	0.14	0.102	0.1248	0.1501	0.003	0.2262	0.1445	0.1258	0.16	0.0017	0.22	0.2	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.072553	NA	NA	NA	NA	NA	0.188	NA	4.5165666
1200	19	43352307	43352307	A	G	ncRNA_intronic	PSG10P	NA	NA	NA	ncRNA_exonic	ENSG00000248257	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs112536177	0.11	0.11	0.086	0.0994409	0.1501	0.003	0.2176	0.053	0.1258	0.16	0.0017	0.21	0.08	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.19325	NA	NA	NA	NA	NA	0.167	NA	4.5165666
1200	19	43357934	43357934	T	C	ncRNA_intronic	PSG10P	NA	NA	NA	ncRNA_intronic	ENSG00000248257	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs8103674	0.11	0.11	0.078	0.0994409	0.1501	0.003	0.2176	0.053	0.1258	0.16	0.0017	0.21	0.08	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.080939	NA	NA	NA	NA	NA	0.087	NA	4.5165666
1200	19	43358418	43358418	G	A	ncRNA_exonic	PSG10P	NA	NA	NA	ncRNA_exonic	ENSG00000248257	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs10408339	0.17	0.17	0.141	0.163139	0.1501	0.003	0.2421	0.2814	0.1258	0.16	0.0017	0.25	0.32	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.162992	NA	NA	NA	NA	NA	0.087	NA	4.5165666
1200	19	43359859	43359859	T	G	ncRNA_exonic	PSG10P	NA	NA	NA	ncRNA_exonic	ENSG00000248257	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs10469289	0.11	0.11	0.081	0.107228	0.1501	0.003	0.2205	0.0809	0.1258	0.16	0.0017	0.21	0.09	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.02871	NA	NA	NA	NA	NA	0.167	NA	4.5165666
1200	22	42899151	42899151	G	A	ncRNA_intronic	SERHL	NA	NA	NA	ncRNA_intronic	ENSG00000172250	NA	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs41276327	0.13	0.13	0.076	0.0854633	0.1501	0.003	0.1787	0.0809	0.044	0.16	0.02	0.21	0.13	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.51008	NA	NA	NA	NA	NA	0.072	NA	4.5165666
1200	11	118997869	118997869	C	T	intronic	HINFP	NA	NA	NA	intronic	ENSG00000172273	NA	NA	NA	NA	NA	11q23.3	NA	Name=ZNF263	Name=8	NA	rs547345	0.45	0.45	0.444	0.419329	0.4712	0.1002	0.6427	0.6505	0.2239	0.48	0.12	0.59	0.68	0.5097	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.68547	NA	NA	0.502561	0.642273	NA	0.464	NA	4.516539
1200	4	134046253	134046253	C	T	intergenic	NONE,PCDH10	dist=NONE;dist=24217	NA	NA	ncRNA_exonic	ENSG00000248735	NA	NA	NA	Score=401;Name=lod=57	NA	4q28.3	NA	NA	NA	NA	rs13134791	0.47	0.47	0.455	0.475639	0.4841	0.3433	0.5447	0.5764	0.4182	0.47	0.36	0.52	0.55	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.433819	NA	NA	NA	NA	NA	0.565	NA	4.5159
1200	12	62931083	62931083	C	G	intronic	MON2	NA	NA	NA	intronic	ENSG00000061987	NA	NA	NA	NA	NA	12q14.1	NA	NA	Name=2	NA	rs73141045	0.09	0.09	0.095	0.0746805	0.1799	0.0159	0.1052	0.0182	0.0818	0.18	0.01	0.12	0.03	0.1331	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.625795	NA	NA	0.171163	0.044939	NA	0.167	NA	4.515837
1200	11	1947789	1947789	G	A	intronic	TNNT3	NA	NA	NA	intronic	ENSG00000130595	NA	NA	NA	NA	NA	11p15.5	NA	Name=E2F6	NA	NA	rs6578952	0.2	0.2	0.194	0.189097	0.2425	0.1101	0.1571	0.2027	0.2198	0.26	0.1	0.17	0.23	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.576998	NA	NA	0.241672	0.20448	NA	0.261	NA	4.515828
1200	3	194476459	194476459	T	C	ncRNA_intronic	LOC100507391	NA	NA	NA	ncRNA_exonic	ENSG00000234805	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs3890435	0.29	0.29	0.3	0.333866	0.1511	0.3393	0.183	0.587	0.2812	0.15	0.33	0.17	0.55	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.105733	NA	NA	NA	NA	NA	0.217	NA	4.5155666
1200	3	194477034	194477034	C	T	ncRNA_intronic	LOC100507391	NA	NA	NA	ncRNA_exonic	ENSG00000234805	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs7613463	0.29	0.29	0.313	0.335264	0.1511	0.3353	0.1844	0.5946	0.2812	0.15	0.33	0.17	0.57	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.72722	NA	NA	NA	NA	NA	0.232	NA	4.5155666
1200	9	97109940	97109940	C	T	ncRNA_intronic	LOC100132077	NA	NA	NA	ncRNA_intronic	ENSG00000232063	NA	NA	NA	NA	NA	9q22.32	NA	NA	NA	NA	rs6479536	0.15	0.15	0.136	0.177716	0.1511	0.0496	0.1441	0.2837	0.2178	0.13	0.07	0.15	0.26	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.695833	NA	NA	NA	NA	NA	0.065	NA	4.5155666
1200	19	43351680	43351680	T	C	ncRNA_intronic	PSG10P	NA	NA	NA	ncRNA_exonic	ENSG00000248257	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs117148062	0.11	0.11	0.081	0.103435	0.1511	0.004	0.219	0.0613	0.1319	0.15	0.0017	0.21	0.11	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.83126	NA	NA	NA	NA	NA	0.174	NA	4.5155666
1200	1	109836842	109836842	C	G	UTR3	MYBPHL	NM_001265613:c.*19G>C,NM_001010985:c.*19G>C	NA	NA	UTR3	ENSG00000221986	ENST00000357155:c.*19G>C	NA	NA	NA	NA	1p13.3	NA	Name=ELF1_(SC-631)	Name=61	NA	rs646335	0.55	0.55	0.536	0.522764	0.6074	0.5357	0.5879	0.4531	0.4703	0.59	0.53	0.64	0.45	0.5862	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.457972	NA	NA	0.624535	0.473218	NA	0.428	NA	4.5151984
1201	13	25562904	25562904	A	G	intergenic	TPTE2P1,PABPC3	dist=20297;dist=107372	NA	NA	ncRNA_exonic	ENSG00000232858	NA	NA	NA	Score=707;Name=lod=998	NA	13q12.13	NA	NA	NA	NA	rs11620162	0.37	0.37	0.34	0.323882	0.4851	0.2877	0.4568	0.1483	0.3384	0.49	0.32	0.46	0.16	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.637221	1.637221	NA	NA	NA	NA	0.333	NA	4.5149
1201	19	55033164	55033164	C	T	intergenic	LAIR2,KIR3DX1	dist=11264;dist=10745	NA	NA	ncRNA_exonic	ENSG00000213016	NA	NA	NA	NA	NA	19q13.42	NA	Name=NFKB,EBF,BATF	NA	NA	rs55876529	0.38	0.38	0.334	0.356629	0.4851	0.4544	0.304	0.1543	0.4346	0.47	0.45	0.36	0.15	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.659145	NA	NA	NA	NA	NA	0.399	NA	4.5149
1201	13	46277016	46277016	A	G	intronic	SPERT	NA	NA	NA	intronic	ENSG00000174015	NA	NA	NA	NA	NA	13q14.13	Score=828;Name=V$CDC5_01	NA	NA	NA	rs755428	0.13	0.13	0.124	0.132388	0.1779	0.0089	0.121	0.1989	0.1309	0.17	0.0017	0.13	0.22	0.1469	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.242601	1.242601	NA	0.160349	0.205629	NA	0.101	NA	4.514851
1201	6	29693938	29693938	G	A	intronic	HLA-F	NA	NA	NA	intronic	ENSG00000204642	NA	NA	NA	NA	NA	6p22.1	NA	Name=Pol2-4H8	NA	NA	rs2735061	0.11	0.11	0.102	0.0944489	0.1809	0.0437	0.1282	0.0545	0.0879	0.16	0.05	0.14	0.08	0.136	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.080553	NA	NA	0.168257	0.069635	NA	0.058	NA	4.514843
1201	7	150878260	150878260	C	G	exonic	ASB10	NA	synonymous SNV	ASB10:NM_001142459:exon3:c.G870C:p.A290A,ASB10:NM_001142460:exon3:c.G870C:p.A290A,ASB10:NM_080871:exon3:c.G825C:p.A275A	exonic	ENSG00000146926	NA	synonymous SNV	ENSG00000146926:ENST00000275838:exon3:c.G870C:p.A290A,ENSG00000146926:ENST00000377867:exon3:c.G825C:p.A275A,ENSG00000146926:ENST00000420175:exon3:c.G870C:p.A290A,ENSG00000146926:ENST00000422024:exon3:c.G1005C:p.A335A,ENSG00000146926:ENST00000434669:exon3:c.G1005C:p.A335A	NA	NA	7q36.1	NA	NA	NA	NA	rs2253592	0.51	0.51	0.505	0.503794	0.3757	0.5486	0.4467	0.7791	0.2577	0.39	0.52	0.44	0.76	0.408	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.327949	NA	NA	0.368219	0.708087	NA	0.551	NA	4.5147476
1201	8	134062266	134062266	A	G	intronic	SLA,TG	NA	NA	NA	intronic	ENSG00000042832,ENSG00000155926	NA	NA	NA	NA	NA	8q24.22	NA	Name=BAF155,GR,p300_(N-15),c-Fos	NA	NA	rs2687836	0.25	0.25	0.219	0.275958	0.1342	0.5288	0.2839	0.0961	0.3988	0.12	0.56	0.26	0.09	0.2166	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.167849	NA	NA	0.134535	0.085565	NA	0.167	NA	4.514665
1201	2	29135468	29135468	C	G	exonic	WDR43	NA	synonymous SNV	WDR43:NM_015131:exon4:c.C498G:p.G166G	exonic	ENSG00000163811	NA	synonymous SNV	ENSG00000163811:ENST00000407426:exon4:c.C498G:p.G166G,ENSG00000163811:ENST00000440983:exon4:c.C231G:p.G77G	NA	NA	2p23.2	Score=853;Name=V$OCT1_05	NA	NA	NA	rs6715296	0.71	0.71	0.68	0.699281	0.7048	0.8591	0.7622	0.5166	0.7311	0.69	0.87	0.73	0.53	0.7265	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.536176	NA	NA	0.720717	0.569095	NA	0.616	NA	4.5146496
1201	3	194476816	194476816	C	T	ncRNA_intronic	LOC100507391	NA	NA	NA	ncRNA_exonic	ENSG00000234805	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs7613256	0.3	0.3	0.329	0.342252	0.1521	0.3433	0.1844	0.6142	0.2812	0.15	0.33	0.17	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.340752	NA	NA	NA	NA	NA	0.246	NA	4.5145666
1201	6	150240083	150240083	T	C	ncRNA_intronic	LOC100652739	NA	NA	NA	ncRNA_UTR3	ENSG00000203722	NA	NA	NA	NA	NA	6q25.1	NA	NA	NA	NA	rs9383944	0.3	0.3	0.303	0.31849	0.1521	0.5367	0.1326	0.4365	0.2372	0.13	0.54	0.16	0.39	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.302132	NA	NA	NA	NA	NA	0.362	NA	4.5145666
1201	1	43906896	43906896	A	G	exonic	SZT2	NA	synonymous SNV	SZT2:NM_015284:exon52:c.A7185G:p.E2395E	exonic	ENSG00000198198	NA	synonymous SNV	ENSG00000198198:ENST00000372442:exon38:c.A4659G:p.E1553E,ENSG00000198198:ENST00000562955:exon52:c.A7185G:p.E2395E	NA	NA	1p34.2	NA	NA	NA	NA	rs2027130	0.26	0.26	0.219	0.196286	0.4205	0.0823	0.3847	0.0885	0.0951	0.42	0.08	0.41	0.1	0.3184	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.861619	NA	NA	0.413372	0.133	NA	0.355	NA	4.5143946
1201	6	29856546	29856546	G	T	ncRNA_intronic	HLA-H	NA	NA	NA	ncRNA_exonic	ENSG00000206341	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs55682221	0.09	0.09	0.048	0.104633	0.0636	0.2411	0.0476	0.0023	0.1851	0.07	0.21	0.06	0.01	0.0887	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.739912	NA	NA	NA	NA	NA	0.116	NA	4.5143666
1201	4	175237408	175237408	T	C	exonic	CEP44	NA	synonymous SNV	CEP44:NM_001040157:exon10:c.T1053C:p.T351T,CEP44:NM_001145314:exon10:c.T1053C:p.T351T	exonic	ENSG00000164118	NA	synonymous SNV	ENSG00000164118:ENST00000296519:exon8:c.T1053C:p.T351T,ENSG00000164118:ENST00000426172:exon8:c.T1053C:p.T351T,ENSG00000164118:ENST00000396791:exon10:c.T1053C:p.T351T,ENSG00000164118:ENST00000457424:exon10:c.T1053C:p.T351T,ENSG00000164118:ENST00000503780:exon10:c.T1053C:p.T351T	NA	NA	4q34.1	Score=789;Name=V$CART1_01	NA	NA	NA	rs1553669	0.7	0.7	0.69	0.686502	0.7366	0.744	0.5605	0.702	0.6442	0.73	0.74	0.57	0.69	0.686	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.776354	NA	NA	0.729884	0.699728	ID=COSM149763;OCCURENCE=1(stomach)	0.681	NA	4.5141826
1201	3	162319458	162319458	A	G	intergenic	OTOL1,CT64	dist=1097728;dist=575573	NA	NA	ncRNA_exonic	ENSG00000243044	NA	NA	NA	Score=295;Name=lod=21	NA	3q26.1	NA	NA	NA	NA	rs7430269	0.37	0.37	0.342	0.394369	0.4861	0.2619	0.4755	0.3525	0.4356	0.47	0.23	0.43	0.32	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.277626	NA	NA	NA	NA	NA	0.486	NA	4.5139
1201	17	45128742	45128742	T	G	intergenic	RPRML,CDC27	dist=72128;dist=66569	NA	NA	ncRNA_exonic	ENSG00000263142	NA	NA	NA	NA	NA	17q21.32	Score=797;Name=V$CART1_01	NA	NA	NA	rs1056066	0.41	0.41	0.21	0.43131	0.4861	0.3482	0.4986	0.3593	0.5102	0.47	0.36	0.49	0.33	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.171087	NA	NA	NA	NA	NA	0.036	NA	4.5139
1201	1	109740548	109740548	G	T	intronic	KIAA1324	NA	NA	NA	intronic	ENSG00000116299	NA	NA	NA	NA	NA	1p13.3	NA	NA	Name=2	NA	rs2296696	0.33	0.33	0.327	0.34405	0.2435	0.5109	0.2738	0.2746	0.4192	0.23	0.54	0.25	0.29	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.69988	2.69988	NA	0.242929	0.242775	NA	0.326	NA	4.513571
1201	19	55221669	55221669	C	G	ncRNA_exonic	LILRP2	NA	NA	NA	ncRNA_intronic	ENSG00000170858,ENSG00000240258	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs2075036	0.22	0.22	0.175	0.250599	0.1531	0.2421	0.2003	0.4259	0.1585	0.15	0.21	0.18	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.494699	NA	NA	NA	NA	NA	0.181	NA	4.5135666
1201	2	96034363	96034363	G	A	intronic	KCNIP3	NA	NA	NA	ncRNA_exonic	ENSG00000235129	NA	NA	NA	Score=574;Name=lod=288	NA	2q11.1	NA	NA	NA	NA	rs2320432	0.8	0.8	0.798	0.774361	0.8201	0.7718	0.8357	0.7254	0.7526	0.81	0.79	0.85	0.74	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.137766	NA	NA	NA	NA	NA	0.725	NA	4.5132333
1201	2	203705787	203705787	G	C	intronic	ICA1L	NA	NA	NA	ncRNA_exonic	ENSG00000233579	NA	NA	NA	Score=662;Name=lod=652	NA	2q33.2	NA	NA	NA	NA	rs1971819	0.8	0.8	0.795	0.820687	0.8201	0.9127	0.8098	0.6755	0.9305	0.81	0.9	0.78	0.66	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.410091	NA	NA	NA	NA	NA	0.833	NA	4.5132333
1201	20	25349120	25349120	T	C	intronic	ABHD12	NA	NA	NA	ncRNA_exonic	ENSG00000227379	NA	NA	NA	Score=678;Name=lod=760	NA	20p11.21	NA	NA	NA	NA	rs2500395	0.8	0.8	0.795	0.839856	0.8201	0.6538	0.8703	0.9493	0.8824	0.82	0.66	0.83	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.489683	NA	NA	NA	NA	NA	0.891	NA	4.5132333
1201	20	31024274	31024274	T	C	exonic	ASXL1	NA	synonymous SNV	ASXL1:NM_015338:exon12:c.T3759C:p.S1253S	exonic	ENSG00000171456	NA	synonymous SNV	ENSG00000171456:ENST00000306058:exon12:c.T3744C:p.S1248S,ENSG00000171456:ENST00000375687:exon13:c.T3759C:p.S1253S	NA	NA	20q11.21	NA	NA	NA	NA	rs4911231	0.42	0.42	0.39	0.405751	0.3499	0.7411	0.4294	0.1664	0.4243	0.36	0.74	0.37	0.17	0.4183	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.386827	1.386827	NA	0.385581	0.192238	NA	0.21	NA	4.5128856
1201	12	7649484	7649484	T	C	exonic	CD163	NA	nonsynonymous SNV	CD163:NM_004244:exon5:c.A1024G:p.I342V,CD163:NM_203416:exon5:c.A1024G:p.I342V	exonic	ENSG00000177575	NA	nonsynonymous SNV	ENSG00000177575:ENST00000359156:exon5:c.A1024G:p.I342V,ENSG00000177575:ENST00000396620:exon5:c.A1024G:p.I342V,ENSG00000177575:ENST00000432237:exon5:c.A1024G:p.I342V,ENSG00000177575:ENST00000541972:exon5:c.A988G:p.I330V	NA	NA	12p13.31	NA	NA	NA	NA	rs4883263	0.79	0.79	0.774	0.76258	0.9662	0.6905	0.8487	0.5628	0.8364	0.97	0.7	0.85	0.6	0.887	0.97	0.09	T	0.004	B	0.007	B	0.033	N	1.000	P	0.96	L	1.31	T	-1.020	T	0.000	T	0.035	0.253	5.366	-1.5	-0.925	-0.207	11.112	0.252828	NA	0.17	0.967907	0.626192	NA	0.71	NA	4.5122264
1201	3	9788168	9788168	C	T	intronic	BRPF1	NA	NA	NA	intronic	ENSG00000156983	NA	NA	NA	NA	NA	3p25.3	NA	NA	Name=88	NA	rs2269112	0.13	0.13	0.118	0.144968	0.1521	0.1657	0.1585	0.0174	0.2791	0.15	0.17	0.17	0.02	0.162	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.266649	NA	NA	0.173721	0.036768	NA	0.188	NA	4.512179
1201	1	1582202	1582202	C	T	intronic	CDK11B	NA	NA	NA	intronic	ENSG00000248333	NA	NA	NA	NA	NA	1p36.33	NA	NA	Name=7	NA	rs61774918	NA	NA	0.401	0.440296	0.4881	0.4573	0.4841	0.3502	0.4642	NA	NA	NA	NA	NA	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.058269	NA	NA	NA	NA	NA	0.043	NA	4.5119
1201	9	20620575	20620575	G	A	intronic	MLLT3	NA	NA	NA	intronic	ENSG00000171843	NA	NA	NA	NA	NA	9p21.3	NA	NA	Name=99	NA	rs2073855	0.47	0.47	0.482	0.438698	0.4881	0.4454	0.4726	0.3215	0.5153	0.51	0.47	0.49	0.39	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.001183	4.001183	NA	NA	NA	NA	0.464	NA	4.5119
1201	12	653984	653984	T	C	intronic	B4GALNT3	NA	NA	NA	intronic	ENSG00000139044	NA	NA	NA	NA	NA	12p13.33	NA	NA	Name=3	NA	rs1008587	0.52	0.52	0.565	0.526358	0.4881	0.631	0.3631	0.5582	0.5307	0.48	0.6	0.41	0.59	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.030923	NA	NA	NA	NA	NA	0.601	NA	4.5119
1201	3	158539961	158539961	G	A	intronic	MFSD1	NA	NA	NA	intronic	ENSG00000118855	NA	NA	NA	NA	NA	3q25.32	NA	NA	Name=2	NA	rs6793618	0.16	0.16	0.161	0.182708	0.166	0.0337	0.1326	0.3018	0.228	0.16	0.03	0.17	0.3	0.1614	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.711426	NA	NA	0.161395	0.26759	NA	0.145	NA	4.511205
1201	1	160141286	160141286	C	G	intronic	ATP1A4	NA	NA	NA	intronic	ENSG00000132681	NA	NA	NA	NA	NA	1q23.2	NA	NA	Name=39	NA	rs625129	0.49	0.49	0.476	0.519169	0.4891	0.5615	0.5648	0.5696	0.4059	0.44	0.52	0.53	0.52	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.130124	NA	NA	NA	NA	NA	0.174	NA	4.5109
1201	3	142895953	142895953	A	T	intergenic	CHST2,SLC9A9	dist=53097;dist=88111	NA	NA	ncRNA_exonic	ENSG00000244171	NA	NA	NA	Score=831;Name=lod=3187	NA	3q24	NA	NA	NA	NA	rs9825493	0.55	0.55	0.495	0.543331	0.4891	0.6895	0.5778	0.5514	0.4131	0.48	0.66	0.55	0.55	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.576324	NA	NA	NA	NA	NA	0.486	NA	4.5109
1201	14	23854324	23854324	A	G	intronic	MYH6	NA	NA	NA	intronic	ENSG00000197616	NA	NA	NA	NA	NA	14q11.2	Score=830;Name=V$NKX61_01	NA	NA	NA	rs178638	0.48	0.48	0.503	0.488019	0.4891	0.254	0.366	0.7474	0.4642	0.5	0.28	0.42	0.73	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.177833	NA	NA	NA	NA	NA	0.42	NA	4.5109
1201	10	97447487	97447487	T	A	intronic	TCTN3	NA	NA	NA	intronic	ENSG00000119977	NA	NA	NA	Score=517;Name=lod=169	NA	10q24.1	NA	NA	NA	NA	rs11188434	0.18	0.18	0.185	0.195288	0.172	0.1429	0.1369	0.2988	0.1748	0.16	0.13	0.16	0.25	0.1629	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.657283	3.657283	NA	0.154535	0.279846	NA	0.167	NA	4.510565
1201	2	86332809	86332809	G	A	intronic	POLR1A	NA	NA	NA	intronic	ENSG00000068654	NA	NA	NA	Score=596;Name=lod=354	NA	2p11.2	NA	Name=Znf143_(16618-1-AP),ETS1,TAF1,USF2,Mxi1_(bHLH),Pol2,ERalpha_a,Pol2-4H8,BCLAF1_(M33-P5B11),Sin3Ak-20,HA-E2F1,YY1_(C-20),NFKB,BAF170,c-Myc,SIX5,CTCF	Name=148	NA	rs4832245	0.69	0.69	0.662	0.677716	0.84	0.6558	0.8271	0.3873	0.82	0.84	0.67	0.85	0.36	0.8015	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.599027	NA	NA	0.84809	0.488712	NA	0.71	NA	4.51041
1201	12	57919107	57919107	C	T	intronic	MBD6	NA	NA	NA	intronic	ENSG00000166987	NA	NA	NA	Score=259;Name=lod=15	NA	12q13.3	NA	NA	NA	NA	rs1148554	0.21	0.21	0.208	0.202077	0.175	0.245	0.1398	0.2443	0.1728	0.18	0.25	0.14	0.26	0.1715	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.488822	NA	NA	0.143156	0.220027	NA	0.203	NA	4.510344
1201	1	50792138	50792138	C	T	intergenic	ELAVL4,DMRTA2	dist=124598;dist=91085	NA	NA	ncRNA_exonic	ENSG00000234080	NA	NA	NA	Score=809;Name=lod=2582	NA	1p32.3	NA	NA	NA	NA	rs6702615	0.39	0.39	0.398	0.41254	0.4901	0.129	0.3343	0.587	0.4448	0.47	0.12	0.38	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.144501	NA	NA	NA	NA	NA	0.362	NA	4.5099
1201	1	9781412	9781412	C	G	intronic	PIK3CD	NA	NA	NA	intronic	ENSG00000171608	NA	NA	NA	NA	NA	1p36.22	NA	NA	Name=4	NA	rs12735071	0.23	0.23	0.234	0.178315	0.4911	0.002	0.2882	0.0439	0.1421	0.48	0.0017	0.33	0.04	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.435834	1.435834	NA	NA	NA	NA	0.203	NA	4.5089
1201	8	11787010	11787010	A	G	intergenic	CTSB,DEFB136	dist=61364;dist=44436	NA	NA	ncRNA_exonic	ENSG00000206014	NA	NA	NA	Score=259;Name=lod=15	NA	8p23.1	NA	NA	NA	NA	rs34937417	NA	NA	0.383	0.446685	0.4911	0.63	0.5159	0.1868	0.5143	NA	NA	NA	NA	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.223043	NA	NA	NA	NA	NA	0.196	NA	4.5089
1201	8	80483555	80483555	T	C	intergenic	IL7,STMN2	dist=765797;dist=39494	NA	NA	ncRNA_exonic	ENSG00000240540	NA	NA	NA	Score=835;Name=lod=3305	NA	8q21.13	NA	NA	NA	NA	rs10090686	0.38	0.38	0.393	0.408946	0.4911	0.122	0.3343	0.5575	0.4724	0.48	0.11	0.36	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.13808	NA	NA	NA	NA	NA	0.406	NA	4.5089
1201	11	20676253	20676253	T	C	intronic	SLC6A5	NA	NA	NA	intronic	ENSG00000165970	NA	NA	NA	Score=536;Name=lod=201	NA	11p15.1	NA	NA	NA	NA	rs2276432	0.15	0.15	0.155	0.159944	0.164	0.0516	0.1167	0.236	0.1953	0.17	0.06	0.12	0.26	0.1583	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.874675	1.874675	NA	0.16907	0.203359	NA	0.239	NA	4.50863
1201	2	56216090	56216090	A	T	ncRNA_exonic	MIR216A	NA	NA	NA	ncRNA_exonic	ENSG00000207798	NA	NA	NA	NA	NA	2p16.1	NA	NA	NA	NA	rs41291179	0.07	0.07	0.059	0.0842652	0.0537	0.001	0.0692	0.2095	0.0429	0.05	NA	0.07	0.16	0.0522	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.928187	2.928187	NA	0.052205	0.173788	NA	0.051	NA	4.5085616
1201	10	66814327	66814327	T	C	intergenic	ANXA2P3,CTNNA3	dist=227693;dist=865398	NA	NA	ncRNA_exonic	ENSG00000270754	NA	NA	NA	Score=399;Name=lod=56	NA	10q21.3	NA	NA	NA	NA	rs10996168	0.48	0.48	0.437	0.493011	0.492	0.5972	0.4352	0.3578	0.6104	0.49	0.61	0.42	0.34	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.052265	NA	NA	NA	NA	NA	0.275	NA	4.508
1201	14	81371088	81371088	A	G	intronic	CEP128	NA	NA	NA	intronic	ENSG00000100629	NA	NA	NA	NA	NA	14q31.1	NA	NA	Name=4	NA	rs8016507	0.39	0.39	0.376	0.416134	0.492	0.2242	0.4078	0.385	0.5838	0.48	0.23	0.42	0.42	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.015566	NA	NA	NA	NA	NA	0.5	NA	4.508
1201	19	58904715	58904715	C	T	intronic	RPS5	NA	NA	NA	intronic	ENSG00000083845	NA	NA	NA	NA	NA	19q13.43	NA	Name=Pol2(b),CTCF_(SC-5916)	NA	NA	rs2289143	0.18	0.18	0.142	0.150559	0.164	0.3492	0.1037	0.0083	0.1575	0.18	0.36	0.12	0.02	0.1643	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.950073	1.950073	NA	0.163953	0.035179	NA	0.138	NA	4.507747
1201	2	211342502	211342502	G	A	intronic	CPS1	NA	NA	NA	intronic	ENSG00000021826	NA	NA	NA	NA	NA	2q34	NA	Name=Pol2-4H8,HEY1,TBP	Name=100	NA	rs17552879	0.46	0.46	0.421	0.480831	0.4871	0.629	0.5519	0.2103	0.637	0.48	0.6	0.55	0.2	0.5066	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.050051	NA	NA	0.498604	0.265306	NA	0.355	NA	4.507696
1201	3	10138189	10138189	T	C	intronic	FANCD2,FANCD2OS	NA	NA	NA	intronic	ENSG00000144554,ENSG00000163705	NA	NA	NA	NA	NA	3p25.3	NA	NA	Name=6	NA	rs2272124	0.23	0.23	0.238	0.241813	0.1412	0.0675	0.196	0.5174	0.1851	0.15	0.1	0.2	0.52	0.1869	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.753854	NA	NA	0.164302	0.471403	NA	0.37	NA	4.507598
1201	22	22869649	22869649	G	C	exonic	ZNF280A	NA	synonymous SNV	ZNF280A:NM_080740:exon2:c.C306G:p.P102P	exonic	ENSG00000169548	NA	synonymous SNV	ENSG00000169548:ENST00000302097:exon2:c.C306G:p.P102P	NA	NA	22q11.22	NA	Name=USF-1	NA	NA	rs361721	0.66	0.66	0.624	0.617612	0.7545	0.4395	0.8012	0.6611	0.4714	0.75	0.47	0.78	0.66	0.6826	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.054384	NA	NA	0.721977	0.671584	NA	0.565	NA	4.5075896
1201	10	90771829	90771829	T	C	exonic	FAS	NA	synonymous SNV	FAS:NM_152871:exon6:c.T579C:p.T193T,FAS:NM_000043:exon7:c.T642C:p.T214T,FAS:NM_152872:exon7:c.T642C:p.T214T	exonic	ENSG00000026103	NA	synonymous SNV	ENSG00000026103:ENST00000357339:exon6:c.T579C:p.T193T,ENSG00000026103:ENST00000352159:exon7:c.T642C:p.T214T,ENSG00000026103:ENST00000355279:exon7:c.T642C:p.T214T,ENSG00000026103:ENST00000355740:exon7:c.T642C:p.T214T	NA	Name=Immunoglobulin A	10q23.31	NA	NA	NA	NA	rs2234978	0.76	0.76	0.753	0.775359	0.7028	0.9573	0.7911	0.6475	0.8241	0.7	0.96	0.76	0.64	0.7561	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.648976	NA	NA	0.700233	0.685429	NA	0.703	NA	4.5075336
1201	4	87684031	87684031	A	G	exonic	PTPN13	NA	synonymous SNV	PTPN13:NM_080684:exon21:c.A3132G:p.P1044P,PTPN13:NM_006264:exon23:c.A3648G:p.P1216P,PTPN13:NM_080683:exon24:c.A3705G:p.P1235P,PTPN13:NM_080685:exon24:c.A3705G:p.P1235P	exonic	ENSG00000163629	NA	synonymous SNV	ENSG00000163629:ENST00000316707:exon21:c.A3132G:p.P1044P,ENSG00000163629:ENST00000427191:exon23:c.A3648G:p.P1216P,ENSG00000163629:ENST00000511467:exon23:c.A3705G:p.P1235P,ENSG00000163629:ENST00000411767:exon24:c.A3705G:p.P1235P,ENSG00000163629:ENST00000436978:exon24:c.A3705G:p.P1235P	NA	NA	4q21.3	NA	Name=USF-1	NA	NA	rs710832	0.74	0.74	0.733	0.710863	0.7167	0.6855	0.7536	0.8449	0.5194	0.71	0.68	0.78	0.81	0.7113	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.408583	NA	NA	0.731369	0.839808	NA	0.623	NA	4.5072976
1201	7	148851213	148851213	G	A	exonic	ZNF398	NA	synonymous SNV	ZNF398:NM_170686:exon2:c.G201A:p.L67L	exonic	ENSG00000197024	NA	synonymous SNV	ENSG00000197024:ENST00000475153:exon2:c.G201A:p.L67L,ENSG00000197024:ENST00000540950:exon3:c.G216A:p.L72L	Score=547;Name=lod=223	NA	7q36.1	NA	NA	NA	NA	rs917124	0.71	0.71	0.699	0.706869	0.6978	0.9514	0.7608	0.3949	0.8476	0.7	0.97	0.72	0.42	0.7417	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.203742	NA	NA	0.720116	0.452111	NA	0.732	NA	4.5070506
1201	3	140140213	140140213	A	T	intronic	CLSTN2	NA	NA	NA	intronic	ENSG00000158258	NA	NA	NA	NA	NA	3q23	Score=889;Name=V$TATA_C	NA	NA	NA	rs7643984	0.63	0.63	0.663	0.620807	0.493	0.6548	0.4625	0.9387	0.3998	0.49	0.66	0.48	0.92	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.829974	NA	NA	NA	NA	NA	0.717	NA	4.507
1201	6	58447068	58447068	A	G	intergenic	GUSBP4,NONE	dist=159344;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000214561	NA	NA	NA	Score=764;Name=lod=1701	NA	6p11.2	NA	NA	NA	NA	rs1224740	0.33	0.33	0.298	0.34405	0.493	0.251	0.3343	0.1256	0.589	0.51	0.23	0.38	0.13	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.221449	NA	NA	NA	NA	ID=COSN167802;OCCURENCE=1(large_intestine)	0.449	NA	4.507
1201	10	106207269	106207269	G	C	intronic	CCDC147	NA	NA	NA	intronic	ENSG00000120051	NA	NA	NA	NA	NA	10q25.1	NA	NA	Name=21	NA	rs1411711	0.5	0.5	0.526	0.48143	0.493	0.494	0.3963	0.5227	0.4611	0.49	0.5	0.47	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.148854	NA	NA	NA	NA	NA	0.587	NA	4.507
1201	19	10916684	10916684	C	T	intronic	DNM2	NA	NA	NA	intronic	ENSG00000079805	NA	NA	NA	NA	NA	19p13.2	NA	NA	Name=2	NA	rs2287029	0.14	0.14	0.118	0.110224	0.172	0.1657	0.1124	0.0098	0.1237	0.18	0.18	0.14	0.02	0.1449	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.954262	NA	NA	0.176163	0.03813	ID=COSN165725;OCCURENCE=1(breast)	0.116	NA	4.506937
1201	19	48337812	48337812	C	T	intronic	CRX	NA	NA	NA	intronic	ENSG00000105392,ENSG00000259009	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs62128766	0.09	0.09	0.095	0.0884585	0.169	0.001	0.0821	0.0666	0.1299	0.17	0.0017	0.09	0.07	0.1495	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.120092	NA	NA	0.174884	0.083749	NA	0.167	CLINSIG=untested;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000085985.1;CLNDSDB=.;CLNDSDBID=.	4.506616
1201	2	108507268	108507268	T	C	UTR3	RGPD4	NM_182588:c.*81T>C	NA	NA	UTR3	ENSG00000196862	ENST00000408999:c.*81T>C	NA	NA	Score=272;Name=lod=17	NA	2q12.3	NA	NA	NA	NA	rs62150254	0.23	0.23	0.185	0.233227	0.4085	0.0377	0.2983	0.121	0.3599	0.4	0.04	0.33	0.13	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.32648	NA	NA	0.418605	0.161127	NA	0.014	NA	4.5062284
1201	6	29912766	29912766	A	T	intronic	HLA-A	NA	NA	NA	intronic	ENSG00000206503	NA	NA	NA	NA	NA	6p22.1	NA	Name=Pol2-4H8	NA	NA	rs3823324	0.47	0.47	0.442	0.433506	0.494	0.377	0.5101	0.4365	0.3712	0.5	0.42	0.48	0.5	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.068446	3.068446	NA	NA	NA	NA	0.217	NA	4.506
1201	17	42722874	42722874	G	A	intergenic	FZD2,C17orf104	dist=84244;dist=10888	NA	NA	ncRNA_exonic	ENSG00000267384	NA	NA	NA	Score=568;Name=lod=271	NA	17q21.31	NA	NA	NA	NA	rs7502041	0.42	0.42	0.385	0.366014	0.494	0.5724	0.5159	0.0356	0.362	0.5	0.59	0.49	0.06	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.037892	NA	NA	NA	NA	NA	0.275	NA	4.506
1201	12	9070366	9070366	T	A	exonic	PHC1	NA	synonymous SNV	PHC1:NM_004426:exon2:c.T93A:p.L31L	exonic	ENSG00000111752	NA	synonymous SNV	ENSG00000111752:ENST00000541181:exon1:c.T93A:p.L31L,ENSG00000111752:ENST00000433083:exon2:c.T93A:p.L31L,ENSG00000111752:ENST00000538657:exon2:c.T93A:p.L31L,ENSG00000111752:ENST00000539063:exon2:c.T93A:p.L31L,ENSG00000111752:ENST00000540574:exon2:c.T93A:p.L31L,ENSG00000111752:ENST00000544539:exon2:c.T93A:p.L31L,ENSG00000111752:ENST00000544916:exon2:c.T93A:p.L31L,ENSG00000111752:ENST00000543824:exon3:c.T93A:p.L31L	Score=604;Name=lod=379	NA	12p13.31	NA	NA	NA	NA	rs4883198	0.66	0.66	0.655	0.6877	0.7167	0.749	0.5908	0.5469	0.8538	0.72	0.76	0.58	0.5	0.7188	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.056121	NA	NA	0.725349	0.597367	NA	0.703	NA	4.5058176
1201	17	76425176	76425176	G	A	intronic	DNAH17	NA	NA	NA	intronic	ENSG00000187775	NA	NA	NA	NA	NA	17q25.3	NA	NA	Name=19	NA	rs691094	0.11	0.11	0.097	0.105631	0.1769	0.0248	0.1153	0.0825	0.1401	0.18	0.03	0.13	0.09	0.1452	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.337387	NA	NA	0.172093	0.098275	NA	0.174	NA	4.505807
1201	4	187207535	187207535	G	T	ncRNA_intronic	LOC285441	NA	NA	NA	ncRNA_intronic	ENSG00000251165	NA	NA	NA	NA	NA	4q35.2	NA	NA	NA	NA	rs2289253	0.09	0.09	0.087	0.0894569	0.0537	0.0823	0.0706	0.1445	0.0726	0.06	0.09	0.07	0.15	0.061	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.114272	NA	NA	0.046279	0.123468	ID=COSN167388;OCCURENCE=1(large_intestine)	0.101	NA	4.5056876
1201	4	187207715	187207715	C	A	ncRNA_intronic	LOC285441	NA	NA	NA	ncRNA_intronic	ENSG00000251165	NA	NA	NA	NA	NA	4q35.2	NA	NA	NA	NA	rs2289254	0.09	0.09	0.095	0.0880591	0.0537	0.0823	0.0706	0.1399	0.0716	0.06	0.09	0.07	0.14	0.0609	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.67923	NA	NA	0.046395	0.121198	ID=COSN167389;OCCURENCE=1(large_intestine)	0.094	NA	4.5056716
1201	6	32523280	32523280	C	T	ncRNA_intronic	HLA-DRB6	NA	NA	NA	ncRNA_intronic	ENSG00000229391	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs34118047	0.11	0.11	0.091	0.10623	0.161	0.0476	0.1369	0.1067	0.0879	0.15	0.05	0.14	0.1	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.155898	NA	NA	NA	NA	NA	0.138	NA	4.5056666
1201	14	70713981	70713981	A	G	ncRNA_exonic	ADAM21P1	NA	NA	NA	ncRNA_exonic	ENSG00000235812	NA	NA	NA	NA	NA	14q24.2	NA	NA	NA	NA	rs12586570	0.15	0.15	0.113	0.201478	0.161	0.2758	0.0965	0.2821	0.1319	0.13	0.22	0.09	0.13	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.214742	NA	NA	NA	NA	NA	0.101	NA	4.5056666
1201	7	4780514	4780514	G	T	exonic	FOXK1	NA	synonymous SNV	FOXK1:NM_001037165:exon2:c.G606T:p.T202T	exonic	ENSG00000164916	NA	nonsynonymous SNV	ENSG00000164916:ENST00000460979:exon1:c.G25T:p.V9F	NA	NA	7p22.1	NA	NA	NA	NA	rs3087749	0.57	0.57	0.543	0.567891	0.4811	0.8502	0.5634	0.3222	0.7014	0.5	0.89	0.54	0.34	0.5391	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.140246	NA	NA	0.474186	0.340218	NA	0.478	NA	4.505614
1201	1	228412308	228412308	G	A	exonic	OBSCN	NA	synonymous SNV	OBSCN:NM_001098623:exon9:c.G2802A:p.S934S,OBSCN:NM_052843:exon9:c.G2802A:p.S934S,OBSCN:NM_001271223:exon10:c.G3078A:p.S1026S	exonic	ENSG00000154358	NA	synonymous SNV	ENSG00000154358:ENST00000284548:exon9:c.G2802A:p.S934S,ENSG00000154358:ENST00000422127:exon9:c.G2802A:p.S934S,ENSG00000154358:ENST00000570156:exon10:c.G3078A:p.S1026S	NA	NA	1q42.13	NA	NA	NA	NA	rs1757152	0.42	0.42	0.392	0.41254	0.3678	0.3839	0.402	0.5885	0.2577	0.37	0.37	0.43	0.57	0.401	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.201427	NA	NA	0.392544	0.556824	NA	0.478	NA	4.5053226
1201	4	187209559	187209559	A	G	ncRNA_intronic	LOC285441	NA	NA	NA	ncRNA_intronic	ENSG00000251165	NA	NA	NA	NA	NA	4q35.2	NA	NA	NA	NA	rs5966	0.09	0.09	0.092	0.0894569	0.0537	0.0843	0.0677	0.1445	0.0726	0.06	0.09	0.07	0.15	0.0615	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.641883	1.641883	NA	0.046163	0.123695	NA	0.101	NA	4.5053036
1202	2	130751644	130751644	T	G	intergenic	RAB6C,LOC440905	dist=11333;dist=31928	NA	NA	ncRNA_intronic	ENSG00000180178	NA	NA	NA	Score=720;Name=lod=1121	NA	2q21.1	NA	NA	NA	NA	rs140103554	NA	NA	0.048	0.485024	0.495	0.4702	0.4741	0.4864	0.4959	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.713926	NA	NA	NA	NA	NA	NA	NA	4.505
1202	9	15035853	15035853	G	C	intergenic	LOC389705,TTC39B	dist=16131;dist=134989	NA	NA	ncRNA_exonic	ENSG00000232000	NA	NA	NA	Score=671;Name=lod=711	NA	9p22.3	NA	NA	NA	NA	rs12337452	0.38	0.38	0.37	0.342851	0.495	0.3671	0.4179	0.174	0.3364	0.49	0.34	0.46	0.17	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.037098	NA	NA	NA	NA	NA	0.406	NA	4.505
1202	6	93967851	93967851	C	T	exonic	EPHA7	NA	synonymous SNV	EPHA7:NM_004440:exon11:c.G2076A:p.P692P	exonic	ENSG00000135333	NA	synonymous SNV	ENSG00000135333:ENST00000369303:exon11:c.G2076A:p.P692P	NA	NA	6q16.1	Score=998;Name=V$ZIC3_01	NA	NA	NA	rs345730	0.72	0.72	0.71	0.73123	0.7237	0.8165	0.6945	0.5991	0.8558	0.72	0.84	0.69	0.62	0.7226	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.927657	NA	NA	0.715581	0.605538	NA	0.594	NA	4.5047856
1202	9	95599082	95599082	C	T	ncRNA_exonic	ANKRD19P	NA	NA	NA	ncRNA_exonic	ENSG00000187984	NA	NA	NA	NA	NA	9q22.31	NA	NA	NA	NA	rs10156497	0.26	0.26	0.253	0.275958	0.162	0.12	0.353	0.5514	0.1268	0.15	0.12	0.36	0.53	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.291763	NA	NA	NA	NA	NA	0.275	NA	4.5046666
1202	11	123470135	123470135	T	C	intronic	GRAMD1B	NA	NA	NA	ncRNA_exonic	ENSG00000254449	NA	NA	NA	Score=562;Name=lod=257	NA	11q24.1	NA	NA	NA	NA	rs1148096	0.87	0.87	0.841	0.871805	0.829	0.997	0.8646	0.767	0.9335	0.83	1	0.84	0.79	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.725914	NA	NA	NA	NA	NA	0.928	NA	4.5043333
1202	3	146243369	146243369	G	T	intronic	PLSCR1	NA	NA	NA	intronic	ENSG00000188313	NA	NA	NA	NA	NA	3q24	NA	Name=MafK_(ab50322)	NA	NA	rs2688693	0.17	0.17	0.173	0.152157	0.165	0.1984	0.2046	0.0726	0.1616	0.18	0.2	0.21	0.09	0.1689	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.252037	NA	NA	0.161885	0.082008	NA	0.188	NA	4.504215
1202	7	118591040	118591040	T	C	intergenic	ANKRD7,KCND2	dist=708256;dist=1322682	NA	NA	ncRNA_exonic	ENSG00000230520	NA	NA	NA	Score=715;Name=lod=1069	NA	7q31.31	NA	NA	NA	NA	rs6978340	0.36	0.36	0.332	0.395168	0.496	0.3353	0.4697	0.0764	0.7311	0.5	0.37	0.43	0.08	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.374356	NA	NA	NA	NA	NA	0.312	NA	4.504
1202	15	31129037	31129037	G	A	intergenic	HERC2P10,FAN1	dist=9051;dist=67018	NA	NA	ncRNA_exonic	ENSG00000259845	NA	NA	NA	Score=644;Name=lod=551	NA	15q13.2	NA	NA	NA	NA	rs11070624	0.54	0.54	0.524	0.528754	0.496	0.8264	0.5173	0.2118	0.6922	0.52	0.86	0.52	0.23	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.364236	NA	NA	NA	NA	NA	0.572	NA	4.504
1202	10	60273155	60273155	C	A	intronic	BICC1	NA	NA	NA	intronic	ENSG00000122870	NA	NA	NA	NA	NA	10q21.1	NA	NA	Name=36	NA	rs7079648	0.5	0.5	0.503	0.51897	0.496	0.4762	0.3285	0.6316	0.5695	0.49	0.48	0.36	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.539981	NA	NA	NA	NA	NA	0.384	NA	4.504
1202	11	119181170	119181170	T	C	exonic	MCAM	NA	synonymous SNV	MCAM:NM_006500:exon15:c.A1800G:p.L600L	exonic	ENSG00000076706	NA	synonymous SNV	ENSG00000076706:ENST00000264036:exon15:c.A1800G:p.L600L	Score=668;Name=lod=693	NA	11q23.3	NA	NA	NA	NA	rs2249466	0.71	0.71	0.691	0.748203	0.7107	0.6577	0.7695	0.767	0.8395	0.7	0.65	0.75	0.77	0.7404	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.089972	NA	NA	0.711874	0.752615	ID=COSM1162429;OCCURENCE=1(pancreas)	0.652	NA	4.5036926
1202	9	95599848	95599848	C	T	ncRNA_exonic	ANKRD19P	NA	NA	NA	ncRNA_exonic	ENSG00000187984,ENSG00000226721	NA	NA	NA	NA	NA	9q22.31	NA	NA	NA	NA	rs3824428	0.26	0.26	0.246	0.276158	0.163	0.12	0.353	0.5514	0.1268	0.15	0.12	0.36	0.53	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.504183	NA	NA	NA	NA	NA	0.268	NA	4.5036666
1202	7	73753250	73753250	T	C	exonic	CLIP2	NA	synonymous SNV	CLIP2:NM_003388:exon3:c.T594C:p.T198T,CLIP2:NM_032421:exon3:c.T594C:p.T198T	exonic	ENSG00000106665	NA	synonymous SNV	ENSG00000106665:ENST00000395060:exon2:c.T594C:p.T198T,ENSG00000106665:ENST00000223398:exon3:c.T594C:p.T198T,ENSG00000106665:ENST00000361545:exon3:c.T594C:p.T198T	NA	NA	7q11.23	NA	NA	Name=6	NA	rs539518	0.57	0.57	0.591	0.541534	0.7584	0.494	0.5778	0.3464	0.6053	0.76	0.47	0.6	0.35	0.6604	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.997688	NA	NA	0.74428	0.403173	NA	0.623	NA	4.5035866
1202	1	149726032	149726032	T	C	intergenic	LINC00869,HIST2H2BF	dist=53299;dist=28213	NA	NA	ncRNA_exonic	ENSG00000226500	NA	NA	NA	Score=638;Name=lod=522	NA	1q21.2	NA	NA	NA	NA	rs2664744	NA	NA	0.19	0.498403	0.497	0.5	0.4986	0.497	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.349913	NA	NA	NA	NA	NA	NA	NA	4.503
1202	20	36962667	36962667	A	G	intronic	BPI	NA	NA	NA	intronic	ENSG00000101425	NA	NA	NA	NA	NA	20q11.23	NA	NA	Name=8	NA	rs2275954	0.53	0.53	0.56	0.559704	0.497	0.3899	0.5259	0.7837	0.5204	0.5	0.41	0.48	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.196099	NA	NA	NA	NA	NA	0.486	NA	4.503
1202	22	29440692	29440692	A	C	intronic	ZNRF3	NA	NA	NA	intronic	ENSG00000183579	NA	NA	NA	NA	NA	22q12.1	NA	NA	Name=97	NA	rs713834	0.51	0.51	0.493	0.490016	0.497	0.5258	0.5403	0.4349	0.4847	0.5	0.55	0.54	0.47	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.188066	NA	NA	NA	NA	NA	0.652	NA	4.503
1202	7	132192949	132192949	T	C	exonic	PLXNA4	NA	synonymous SNV	PLXNA4:NM_001105543:exon2:c.A504G:p.S168S,PLXNA4:NM_020911:exon2:c.A504G:p.S168S,PLXNA4:NM_181775:exon3:c.A504G:p.S168S	exonic	ENSG00000221866	NA	synonymous SNV	ENSG00000221866:ENST00000321063:exon2:c.A504G:p.S168S,ENSG00000221866:ENST00000359827:exon2:c.A504G:p.S168S,ENSG00000221866:ENST00000423507:exon2:c.A504G:p.S168S,ENSG00000221866:ENST00000378539:exon3:c.A504G:p.S168S	NA	NA	7q32.3	NA	NA	NA	NA	rs156962	0.37	0.37	0.361	0.393371	0.3917	0.2718	0.3588	0.5159	0.3793	0.4	0.26	0.34	0.48	0.383	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.794856	NA	NA	0.38907	0.480481	ID=COSM150391,COSM150390;OCCURENCE=1(stomach)	0.536	NA	4.5028966
1202	10	44285159	44285159	T	C	ncRNA_exonic	HNRNPA3P1	NA	NA	NA	ncRNA_exonic	ENSG00000226790	NA	NA	NA	NA	NA	10q11.21	NA	NA	NA	NA	rs1998748	0.08	0.08	0.086	0.077476	0.0865	NA	0.0821	0.1778	0.0092	0.07	NA	0.1	0.16	0.0773	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.747682	NA	NA	NA	NA	NA	0.08	NA	4.5028666
1202	19	15880714	15880714	C	G	ncRNA_intronic	CYP4F24P	NA	NA	NA	ncRNA_intronic	ENSG00000267594,ENSG00000268673	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs3752148	0.15	0.15	0.14	0.15655	0.164	0.122	0.1095	0.152	0.2239	0.16	0.14	0.1	0.16	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.086322	NA	NA	NA	NA	NA	0.181	NA	4.5026666
1202	13	111137240	111137240	A	G	intronic	COL4A2	NA	NA	NA	intronic	ENSG00000134871	NA	NA	NA	NA	NA	13q34	Score=803;Name=V$STAT3_01	NA	NA	NA	rs2296853	0.15	0.15	0.132	0.125799	0.168	0.1687	0.2464	0.0287	0.0838	0.16	0.18	0.22	0.03	0.157	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.530193	NA	NA	0.172652	0.042938	NA	0.051	NA	4.502348
1202	1	165648886	165648886	G	A	intronic	ALDH9A1	NA	NA	NA	intronic	ENSG00000143149	NA	NA	NA	NA	NA	1q24.1	NA	Name=CTCF	NA	NA	rs4646896	0.34	0.34	0.363	0.354433	0.498	0.1538	0.3343	0.3654	0.4131	0.48	0.12	0.33	0.37	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.33224	NA	NA	NA	NA	NA	0.37	NA	4.502
1202	3	11926423	11926423	A	G	intergenic	TAMM41,SYN2	dist=38071;dist=119439	NA	NA	ncRNA_exonic	ENSG00000230342	NA	NA	NA	Score=498;Name=lod=141	NA	3p25.2	NA	NA	NA	NA	rs2055283	0.58	0.58	0.585	0.579273	0.498	0.6885	0.4467	0.7443	0.4213	0.51	0.63	0.51	0.69	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.007844	NA	NA	NA	NA	NA	0.565	NA	4.502
1202	7	7333294	7333294	C	T	intergenic	C1GALT1,COL28A1	dist=45014;dist=64950	NA	NA	ncRNA_exonic	ENSG00000236712	NA	NA	NA	Score=414;Name=lod=64	NA	7p21.3	NA	NA	NA	NA	rs1317198	0.57	0.57	0.554	0.571286	0.498	0.629	0.6009	0.6104	0.5133	0.49	0.62	0.6	0.61	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.374578	NA	NA	NA	NA	NA	0.623	NA	4.502
1202	15	30337377	30337377	G	C	intergenic	TJP1,ULK4P3	dist=222671;dist=58558	NA	NA	ncRNA_exonic	ENSG00000260174	NA	NA	NA	Score=673;Name=lod=727	NA	15q13.2	NA	NA	NA	NA	rs10775120	0.49	0.49	0.501	0.524161	0.498	0.2609	0.4049	0.8351	0.4867	0.49	0.23	0.43	0.83	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.085647	NA	1	NA	NA	NA	0.594	NA	4.502
1202	9	131689361	131689361	G	A	exonic	PHYHD1	NA	synonymous SNV	PHYHD1:NM_001100877:exon2:c.G78A:p.A26A,PHYHD1:NM_001100876:exon4:c.G78A:p.A26A,PHYHD1:NM_174933:exon4:c.G78A:p.A26A	exonic	ENSG00000175287	NA	synonymous SNV	ENSG00000175287:ENST00000421063:exon2:c.G78A:p.A26A,ENSG00000175287:ENST00000426694:exon3:c.G78A:p.A26A,ENSG00000175287:ENST00000308941:exon4:c.G78A:p.A26A,ENSG00000175287:ENST00000353176:exon4:c.G78A:p.A26A,ENSG00000175287:ENST00000372592:exon4:c.G78A:p.A26A,ENSG00000175287:ENST00000419552:exon4:c.G78A:p.A26A,ENSG00000175287:ENST00000412476:exon5:c.G78A:p.A26A,ENSG00000175287:ENST00000428610:exon5:c.G78A:p.A26A	NA	NA	9q34.11	NA	NA	NA	NA	rs751340	0.38	0.38	0.372	0.369808	0.4105	0.2371	0.4294	0.4228	0.3507	0.41	0.23	0.42	0.48	0.3763	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.511344	NA	NA	0.37814	0.418974	ID=COSM150723;OCCURENCE=1(stomach)	0.478	NA	4.5017266
1202	1	146496260	146496260	A	T	ncRNA_intronic	LOC728989	NA	NA	NA	ncRNA_intronic	ENSG00000227242	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs7534094	0.16	0.16	0.141	0.162141	0.165	0.1935	0.3228	0.0461	0.1697	0.15	0.18	0.31	0.06	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.122274	NA	NA	NA	NA	NA	0.123	NA	4.5016666
1202	3	125643995	125643995	C	T	ncRNA_intronic	FAM86JP	NA	NA	NA	ncRNA_intronic	ENSG00000171084	NA	NA	NA	NA	NA	3q21.2	NA	NA	NA	NA	rs13063019	0.19	0.19	0.131	0.214657	0.165	0.1062	0.147	0.4213	0.1462	0.15	0.09	0.17	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.221395	NA	NA	NA	NA	NA	NA	NA	4.5016666
1202	21	47541553	47541553	A	G	intronic	COL6A2	NA	NA	NA	intronic	ENSG00000142173	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs1077182	0.09	0.09	0.101	0.0734824	0.1899	0.0258	0.0677	0.031	0.0644	0.18	0.03	0.07	0.04	0.1228	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.105367	NA	NA	0.185668	0.055556	NA	0.203	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000079847.1;CLNDSDB=.;CLNDSDBID=.	4.501632
1202	2	161029218	161029218	G	A	exonic	ITGB6	NA	synonymous SNV	ITGB6:NM_000888:exon6:c.C783T:p.D261D	exonic	ENSG00000115221	NA	synonymous SNV	ENSG00000115221:ENST00000428609:exon5:c.C657T:p.D219D,ENSG00000115221:ENST00000283249:exon6:c.C783T:p.D261D,ENSG00000115221:ENST00000409967:exon6:c.C783T:p.D261D,ENSG00000115221:ENST00000409872:exon7:c.C783T:p.D261D	NA	NA	2q24.2	NA	NA	NA	NA	rs2305818	0.29	0.29	0.258	0.228435	0.4225	0.3323	0.2594	0.0325	0.1646	0.42	0.33	0.29	0.04	0.3358	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.79	NA	NA	0.40686	0.093736	NA	0.167	NA	4.5015066
1202	1	165648894	165648894	C	G	intronic	ALDH9A1	NA	NA	NA	intronic	ENSG00000143149	NA	NA	NA	NA	NA	1q24.1	NA	Name=CTCF	NA	NA	rs4646895	0.34	0.34	0.357	0.354633	0.499	0.1538	0.3343	0.3654	0.4131	0.48	0.12	0.33	0.37	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.466975	NA	NA	NA	NA	NA	0.37	NA	4.501
1202	10	120403436	120403436	C	T	intergenic	PRLHR,CACUL1	dist=48276;dist=37058	NA	NA	ncRNA_exonic	ENSG00000225155	NA	NA	NA	Score=629;Name=lod=478	NA	10q26.11	NA	NA	NA	NA	rs1538264	0.59	0.59	0.607	0.588858	0.499	0.8413	0.4726	0.5499	0.5562	0.51	0.85	0.46	0.51	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.742981	NA	NA	NA	NA	NA	0.514	NA	4.501
1202	16	30078492	30078492	G	C	intronic	ALDOA	NA	NA	NA	intronic	ENSG00000149925	NA	NA	NA	NA	NA	16p11.2	NA	Name=Pol2(b)	NA	NA	rs9783783	0.48	0.48	0.469	0.488419	0.499	0.3661	0.4107	0.618	0.4836	0.49	0.36	0.45	0.63	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.078912	NA	NA	NA	NA	NA	0.471	NA	4.501
1202	12	6637845	6637845	T	C	exonic	NCAPD2	NA	synonymous SNV	NCAPD2:NM_014865:exon26:c.T3300C:p.R1100R	exonic	ENSG00000010292	NA	synonymous SNV	ENSG00000010292:ENST00000545962:exon25:c.T3165C:p.R1055R,ENSG00000010292:ENST00000315579:exon26:c.T3300C:p.R1100R	Score=423;Name=lod=70	NA	12p13.31	NA	NA	NA	NA	rs2072374	0.79	0.79	0.791	0.797125	0.7137	0.6925	0.8271	0.9811	0.7209	0.72	0.7	0.81	0.98	0.7456	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.079591	NA	NA	0.70686	0.93872	NA	0.826	NA	4.5005066
1202	6	57472476	57472476	T	C	intronic	PRIM2	NA	NA	NA	intronic	ENSG00000146143	NA	NA	NA	NA	NA	6p11.2	NA	NA	Name=12	NA	rs9382819	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4995	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.750126	NA	NA	NA	NA	NA	0.464	NA	4.5005
1202	1	145039562	145039562	C	T	intronic	NBPF9,PDE4DIP	NA	NA	NA	intronic	ENSG00000178104	NA	NA	NA	NA	NA	1q21.1	NA	Name=CTCF,EBF,Pol2(b),ZNF263	NA	NA	rs1663878	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4997	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.133103	NA	NA	NA	NA	NA	0.5	NA	4.5003
1202	6	57246969	57246969	G	A	intronic	PRIM2	NA	NA	NA	intronic	ENSG00000146143	NA	NA	NA	Score=643;Name=lod=548	NA	6p11.2	NA	NA	NA	NA	rs4256440	NA	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4998	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.598899	1.598899	NA	NA	NA	NA	0.5	NA	4.5002
1202	17	21215637	21215637	G	A	intronic	MAP2K3	NA	NA	NA	intronic	ENSG00000034152	NA	NA	NA	NA	NA	17p11.2	NA	NA	Name=4	NA	rs66486636	0.5	0.5	0.45	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.4998	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.709097	NA	NA	NA	NA	NA	0.5	NA	4.5002
1202	17	21215643	21215643	A	G	intronic	MAP2K3	NA	NA	NA	intronic	ENSG00000034152	NA	NA	NA	NA	NA	17p11.2	NA	NA	Name=4	NA	rs73302034	0.5	0.5	0.44	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.4998	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.218901	NA	NA	NA	NA	NA	0.5	NA	4.5002
1202	6	27219491	27219491	C	G	intronic	PRSS16	NA	NA	NA	intronic	ENSG00000112812	NA	NA	NA	NA	NA	6p22.1	NA	Name=Pol2-4H8,YY1,Pol2,HMGN3,CTCF,HEY1,CCNT2	NA	NA	rs35589403	0.13	0.13	0.108	0.114217	0.173	0.0139	0.1153	0.1589	0.0961	0.18	0.01	0.13	0.2	0.1512	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.582572	NA	NA	0.175611	0.146585	NA	0.203	NA	4.500189
1202	1	17013214	17013214	T	C	intergenic	MIR3675,ESPNP	dist=5391;dist=4499	NA	NA	upstream;downstream	ENSG00000236698;ENSG00000268869	NA	NA	NA	Score=576;Name=lod=293	NA	1p36.13	NA	NA	NA	NA	rs10907263	NA	NA	0.373	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.713272	NA	NA	NA	NA	NA	0.254	NA	4.5
1202	1	55834477	55834477	C	T	intergenic	MIR4422,PPAP2B	dist=143081;dist=1125942	NA	NA	downstream	ENSG00000231900	NA	NA	NA	Score=652;Name=lod=595	NA	1p32.3	NA	NA	NA	NA	rs57649799	0.02	0.02	0.02	0.0247604	NA	NA	0.0115	0.0877	NA	NA	NA	0.01	0.08	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.332171	2.332171	NA	NA	NA	NA	0.022	NA	4.5
1202	1	144868204	144868204	A	C	intronic	NBPF9,PDE4DIP	NA	NA	NA	intronic	ENSG00000178104	NA	NA	NA	NA	NA	1q21.1	NA	NA	Name=2	NA	rs1747951	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.335279	NA	NA	NA	NA	NA	0.5	NA	4.5
1202	1	144871889	144871889	A	C	intronic	NBPF9,PDE4DIP	NA	NA	NA	intronic	ENSG00000178104	NA	NA	NA	Score=403;Name=lod=58	NA	1q21.1	NA	NA	NA	NA	rs1698606	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.133024	NA	NA	NA	NA	NA	0.5	NA	4.5
1202	1	144874038	144874038	T	C	intronic	NBPF9,PDE4DIP	NA	NA	NA	intronic	ENSG00000178104	NA	NA	NA	Score=471;Name=lod=109	NA	1q21.1	NA	NA	NA	NA	rs1419160	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.602765	4.602765	NA	NA	NA	NA	0.486	NA	4.5
1202	1	144886063	144886063	T	C	intronic	NBPF9,PDE4DIP	NA	NA	NA	intronic	ENSG00000178104	NA	NA	NA	NA	NA	1q21.1	NA	Name=PU.1	NA	NA	rs1625285	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.713524	NA	NA	NA	NA	NA	0.493	NA	4.5
1202	1	144930571	144930571	C	A	intronic	NBPF9,PDE4DIP	NA	NA	NA	intronic	ENSG00000178104	NA	NA	NA	NA	NA	1q21.1	NA	Name=USF1_(SC-8983),USF-1	NA	NA	rs2762866	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.671462	NA	NA	NA	NA	NA	0.5	NA	4.5
1202	1	149726118	149726118	A	G	intergenic	LINC00869,HIST2H2BF	dist=53385;dist=28127	NA	NA	ncRNA_exonic	ENSG00000226500	NA	NA	NA	Score=638;Name=lod=522	NA	1q21.2	NA	NA	NA	NA	rs2664745	NA	NA	0.38	0.500399	0.5	0.5	0.5014	0.5008	0.5	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.727823	NA	NA	NA	NA	NA	0.007	NA	4.5
1202	2	91777265	91777265	G	T	intergenic	NONE,LOC654342	dist=NONE;dist=47444	NA	NA	upstream	ENSG00000233991	NA	NA	NA	NA	NA	2p11.1	NA	NA	Name=4	NA	rs1809096	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.020402	NA	NA	NA	NA	NA	0.261	NA	4.5
1202	2	91802817	91802817	G	A	intergenic	NONE,LOC654342	dist=NONE;dist=21892	NA	NA	ncRNA_intronic	ENSG00000233991	NA	NA	NA	NA	NA	2p11.1	NA	Name=SUZ12,KAP1	NA	NA	rs1649457	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.418298	NA	NA	NA	NA	NA	0.5	NA	4.5
1202	2	91802820	91802820	C	G	intergenic	NONE,LOC654342	dist=NONE;dist=21889	NA	NA	ncRNA_intronic	ENSG00000233991	NA	NA	NA	NA	NA	2p11.1	NA	Name=SUZ12,KAP1	NA	NA	rs1640048	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.061229	NA	NA	NA	NA	NA	0.5	NA	4.5
1202	2	91924698	91924698	G	C	intergenic	LOC654342,GGT8P	dist=76723;dist=38670	NA	NA	upstream	ENSG00000223703	NA	NA	NA	Score=329;Name=lod=29	NA	2p11.1	NA	NA	NA	NA	rs2089351	0.36	0.36	0.385	NA	NA	NA	NA	NA	NA	0.33	0.18	0.25	0.7	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.158062	NA	NA	NA	NA	NA	NA	NA	4.5
1202	2	133019216	133019216	C	T	intergenic	ANKRD30BL,GPR39	dist=3674;dist=154931	NA	NA	upstream	ENSG00000233786	NA	NA	NA	Score=728;Name=lod=1217	NA	2q21.2	NA	NA	NA	NA	rs4018086	NA	NA	0.429	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.032117	NA	NA	NA	NA	NA	0.899	NA	4.5
1202	2	133019291	133019291	C	A	intergenic	ANKRD30BL,GPR39	dist=3749;dist=154856	NA	NA	upstream	ENSG00000233786	NA	NA	NA	Score=728;Name=lod=1217	NA	2q21.2	NA	NA	NA	NA	rs75871437	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.176426	NA	NA	NA	NA	NA	NA	NA	4.5
1202	7	142045899	142045899	A	G	intergenic	LOC730441,MTRNR2L6	dist=73831;dist=328232	NA	NA	downstream	ENSG00000211745	NA	NA	NA	NA	NA	7q34	NA	NA	Name=2	NA	rs2974900	NA	NA	0.239	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.054	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.03364	NA	NA	NA	NA	NA	0.094	NA	4.5
1202	8	85074717	85074717	C	T	intergenic	NONE,RALYL	dist=NONE;dist=20736	NA	NA	downstream	ENSG00000253362,ENSG00000254195	NA	NA	NA	NA	NA	8q21.2	NA	NA	NA	NA	NA	NA	NA	NA	0.000399361	NA	NA	NA	NA	0.002	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.499681	NA	NA	NA	NA	NA	NA	NA	4.5
1202	9	67335062	67335062	G	A	intergenic	AQP7P1,FAM27B	dist=45570;dist=457867	NA	NA	upstream	ENSG00000237238	NA	NA	NA	NA	NA	9q13	NA	NA	Name=10	NA	rs4929655	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.693013	NA	NA	NA	NA	NA	NA	NA	4.5
1202	9	68414199	68414199	C	T	intergenic	ANKRD20A3,LOC642236	dist=443906;dist=13584	NA	NA	upstream	ENSG00000232815	NA	NA	NA	NA	NA	9q13	NA	NA	Name=129	NA	rs4928848	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.174962	NA	NA	NA	NA	NA	0.58	NA	4.5
1202	10	46960084	46960084	G	A	UTR3	SYT15	NM_031912:c.*1886C>T	NA	NA	ncRNA_intronic	ENSG00000231187	NA	NA	NA	NA	NA	10q11.22	NA	NA	NA	NA	rs9422009	NA	NA	0.375	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.013856	NA	NA	NA	NA	NA	0.399	NA	4.5
1202	12	123186596	123186596	C	A	UTR3	HCAR2	NM_177551:c.*143G>T	NA	NA	ncRNA_UTR3	ENSG00000182782	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs579935	0.21	0.21	0.08	NA	NA	NA	NA	NA	NA	0.12	0.37	0.17	0.2	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.503239	NA	NA	NA	NA	NA	0.072	NA	4.5
1202	16	32391477	32391477	T	C	intergenic	LOC390705,TP53TG3	dist=90175;dist=293372	NA	NA	upstream	ENSG00000260327	NA	NA	NA	Score=809;Name=lod=2596	NA	16p11.2	NA	NA	NA	NA	rs28718682	NA	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.028822	NA	NA	NA	NA	NA	0.029	NA	4.5
1202	16	33740747	33740747	C	T	intergenic	RNU6-76P,LINC00273	dist=177504;dist=220305	NA	NA	downstream	ENSG00000271620	NA	NA	NA	NA	NA	16p11.2	NA	Name=CTCF	NA	NA	rs2549429	0.19	0.19	0.165	NA	NA	NA	NA	NA	NA	0.18	0.14	0.16	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.105839	NA	NA	NA	NA	NA	NA	NA	4.5
1202	16	33943699	33943699	C	T	intergenic	RNU6-76P,LINC00273	dist=380456;dist=17353	NA	NA	downstream	ENSG00000259987	NA	NA	NA	NA	NA	16p11.2	NA	NA	Name=11	NA	rs79019658	NA	NA	0.637	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.565525	NA	NA	NA	NA	NA	0.014	NA	4.5
1202	17	21208317	21208317	G	A	intronic	MAP2K3	NA	NA	NA	intronic	ENSG00000034152	NA	NA	NA	NA	NA	17p11.2	NA	Name=ZNF274	NA	NA	rs4456559	0.5	0.5	NA	0.000399361	NA	0.001	NA	NA	0.001	0.5	0.5	0.5	0.5	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.740376	NA	NA	NA	NA	NA	0.478	NA	4.5
1202	18	21043106	21043106	T	C	intronic	RIOK3	NA	NA	NA	intronic	ENSG00000101782	NA	NA	NA	NA	NA	18q11.2	NA	NA	Name=38	NA	rs72884533	0.35	0.35	0.35	0.326278	0.5	0.2361	0.4035	0.1831	0.3793	0.5	0.19	0.43	0.24	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.730946	2.730946	NA	NA	NA	NA	0.348	NA	4.5
1202	19	21558818	21558818	C	G	ncRNA_intronic	ZNF738	NA	NA	NA	UTR3	ENSG00000172687	ENST00000597492:c.*358C>G	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs185096575	0.0037	0.0037	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0028	0.01	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.941433	NA	NA	NA	NA	NA	0.007	NA	4.5
1202	20	17993623	17993623	T	A	intergenic	MGME1,OVOL2	dist=21861;dist=11173	NA	NA	downstream	ENSG00000218902	NA	NA	NA	Score=631;Name=lod=490	NA	20p11.23	NA	NA	NA	NA	rs368075266	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.647533	NA	NA	NA	NA	NA	NA	NA	4.5
1202	20	53691153	53691153	C	T	intergenic	DOK5,CBLN4	dist=423443;dist=881260	NA	NA	upstream	ENSG00000185834	NA	NA	NA	Score=754;Name=lod=1544	NA	20q13.2	NA	NA	NA	NA	rs10446020	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.446873	1.446873	NA	NA	NA	NA	0.014	NA	4.5
1202	21	11058025	11058025	T	C	UTR3	BAGE	NM_001187:c.*403A>G	NA	NA	ncRNA_intronic	ENSG00000187172	NA	NA	NA	NA	NA	21p11.1	NA	NA	NA	NA	rs3877863	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.076828	NA	NA	NA	NA	NA	0.493	NA	4.5
1202	X	155214964	155214964	T	C	intergenic	VAMP7,IL9R	dist=41531;dist=12282	NA	NA	downstream	ENSG00000223484	NA	NA	NA	Score=352;Name=lod=36	NA	Xq28	NA	NA	NA	NA	rs77788813	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.000755	NA	NA	NA	NA	NA	0.283	NA	4.5
1202	X	155215920	155215920	C	T	intergenic	VAMP7,IL9R	dist=42487;dist=11326	NA	NA	upstream	ENSG00000223484	NA	NA	NA	Score=552;Name=lod=233	NA	Xq28	NA	NA	NA	NA	rs4013615	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.114959	NA	NA	NA	NA	NA	0.696	NA	4.5
1202	1	145311083	145311083	A	C	intronic	NBPF10,NBPF9	NA	NA	NA	intronic	ENSG00000163386,ENSG00000255168	NA	NA	NA	NA	NA	1q21.1	NA	NA	Name=2	NA	rs4649871	NA	NA	0.181	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5003	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.39437	NA	NA	NA	NA	NA	NA	NA	4.4997
1202	15	25219512	25219512	T	C	UTR5;UTR3	SNRPN;SNURF	NM_022806:c.-89T>C,NM_022808:c.-89T>C,NM_022807:c.-89T>C,NM_022805:c.-89T>C,NM_003097:c.-89T>C;NM_005678:c.*100T>C	NA	NA	UTR5;UTR3	ENSG00000128739;ENSG00000214265	ENST00000400098:c.-89T>C,ENST00000400100:c.-89T>C,ENST00000400097:c.-89T>C,ENST00000390687:c.-89T>C,ENST00000584968:c.-89T>C,ENST00000554227:c.-578T>C,ENST00000577565:c.-89T>C,ENST00000444203:c.-578T>C;ENST00000338094:c.*100T>C	NA	NA	NA	NA	15q11.2	NA	Name=Pol2	NA	NA	rs705	0.54	0.54	0.562	0.521765	0.4254	0.5198	0.513	0.7973	0.2566	0.42	0.52	0.54	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.729191	NA	NA	0.408548	0.742052	NA	0.565	NA	4.4993854
1202	2	219706535	219706535	C	T	intergenic	PRKAG3,WNT6	dist=10023;dist=18011	NA	NA	ncRNA_exonic	ENSG00000232625	NA	NA	NA	Score=725;Name=lod=1174	NA	2q35	NA	NA	NA	NA	rs10197074	0.24	0.24	0.216	0.183706	0.501	0.0258	0.2608	0.025	0.18	0.49	0.02	0.32	0.04	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.950556	NA	NA	NA	NA	NA	0.203	NA	4.499
1202	15	84950635	84950635	A	G	intergenic	GOLGA6L4,DNM1P41	dist=36515;dist=95171	NA	NA	downstream	ENSG00000221247,ENSG00000259570,ENSG00000259683	NA	NA	NA	NA	NA	15q25.2	NA	NA	NA	NA	NA	NA	NA	NA	0.000399361	0.001	NA	NA	0.0008	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.588399	NA	NA	NA	NA	NA	NA	NA	4.499
1202	6	29942979	29942979	G	C	ncRNA_exonic	HCG9	NA	NA	NA	ncRNA_exonic	ENSG00000204625	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs9260830	0.05	0.05	0.064	0.0519169	0.0517	0.0377	0.0346	0.0696	0.0552	0.05	0.05	0.04	0.08	0.059	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.386004	NA	NA	0.057217	0.06163	NA	0.036	NA	4.4987496
1202	7	76950035	76950035	C	T	intronic	GSAP	NA	NA	NA	intronic	ENSG00000186088	NA	NA	NA	NA	NA	7q11.23	NA	Name=MafK_(ab50322)	NA	NA	rs6950870	0.12	0.12	0.105	0.144968	0.159	0.0496	0.1585	0.1082	0.2689	0.17	0.04	0.17	0.12	0.1744	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.05573	NA	NA	0.168494	0.107663	NA	0.123	NA	4.498106
1202	1	111060669	111060669	T	C	exonic	KCNA10	NA	synonymous SNV	KCNA10:NM_005549:exon1:c.A741G:p.L247L	exonic	ENSG00000143105	NA	synonymous SNV	ENSG00000143105:ENST00000369771:exon1:c.A741G:p.L247L	NA	NA	1p13.3	Score=786;Name=V$COMP1_01	NA	NA	NA	rs1281175	0.67	0.67	0.671	0.624201	0.7336	0.5853	0.7839	0.5144	0.5869	0.75	0.63	0.73	0.52	0.7049	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.665978	NA	NA	0.730581	0.556287	NA	0.601	NA	4.4975856
1202	1	111061062	111061062	T	C	exonic	KCNA10	NA	synonymous SNV	KCNA10:NM_005549:exon1:c.A348G:p.E116E	exonic	ENSG00000143105	NA	synonymous SNV	ENSG00000143105:ENST00000369771:exon1:c.A348G:p.E116E	Score=667;Name=lod=688	NA	1p13.3	NA	NA	NA	NA	rs1281174	0.67	0.67	0.645	0.624201	0.7336	0.5853	0.7839	0.5144	0.5869	0.75	0.63	0.73	0.52	0.705	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.220174	NA	NA	0.730581	0.555152	NA	0.601	NA	4.4974856
1202	4	57273840	57273840	C	G	exonic	PPAT	NA	synonymous SNV	PPAT:NM_002703:exon2:c.G171C:p.S57S	exonic	ENSG00000128059	NA	synonymous SNV	ENSG00000128059:ENST00000264220:exon2:c.G171C:p.S57S,ENSG00000128059:ENST00000507724:exon2:c.G171C:p.S57S,ENSG00000128059:ENST00000510643:exon2:c.G171C:p.S57S	NA	NA	4q12	NA	NA	NA	NA	rs11538098	0.26	0.26	0.261	0.260184	0.4016	0.0704	0.2795	0.239	0.3252	0.41	0.06	0.29	0.25	0.351	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.591295	NA	NA	0.41686	0.253518	ID=COSM1131102;OCCURENCE=1(prostate)	0.283	NA	4.4972066
1202	7	149523277	149523277	A	G	exonic	SSPO	NA	nonsynonymous SNV	SSPO:NM_198455:exon101:c.A14360G:p.H4787R	ncRNA_exonic	ENSG00000197558	NA	NA	NA	NA	NA	7q36.1	NA	NA	NA	NA	rs1004200	0.43	0.43	0.421	0.448882	0.3052	0.4286	0.3732	0.7027	0.3282	0.29	0.43	0.38	0.68	0.3698	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.451905	NA	0.64	0.327936	0.643148	NA	0.464	NA	4.497064
1202	6	32497824	32497824	C	A	intronic	HLA-DRB5	NA	NA	NA	intronic	ENSG00000198502	NA	NA	NA	NA	NA	6p21.32	NA	Name=Pol2-4H8,ELF1_(SC-631),NFKB	NA	NA	rs201954564	NA	NA	0.157	0.53095	0.503	0.5079	0.5014	0.6241	0.4785	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0148	NA	NA	NA	NA	NA	NA	NA	4.497
1202	11	1825231	1825231	G	A	intergenic	MOB2,SYT8	dist=39730;dist=30443	NA	NA	ncRNA_exonic	ENSG00000230080	NA	NA	NA	Score=819;Name=lod=2848	NA	11p15.5	NA	NA	NA	NA	rs11041180	0.36	0.36	0.341	0.31869	0.503	0.2758	0.3156	0.2005	0.3354	0.51	0.28	0.36	0.21	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.774586	NA	NA	NA	NA	NA	0.246	NA	4.497
1202	16	56686704	56686704	G	A	intronic	MT1B	NA	NA	NA	intronic	ENSG00000169688	NA	NA	NA	NA	NA	16q12.2	NA	NA	Name=3	NA	rs1875233	0.38	0.38	0.383	0.395367	0.503	0.3185	0.402	0.2867	0.5061	0.51	0.3	0.43	0.26	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.007731	NA	NA	NA	NA	NA	0.413	NA	4.497
1202	16	56686818	56686818	T	C	intronic	MT1B	NA	NA	NA	intronic	ENSG00000169688	NA	NA	NA	NA	NA	16q12.2	NA	NA	Name=3	NA	rs8052334	0.38	0.38	0.394	0.395168	0.503	0.3185	0.402	0.2859	0.5061	0.51	0.3	0.43	0.26	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.096912	NA	NA	NA	NA	NA	0.377	NA	4.497
1202	3	125639648	125639648	T	C	ncRNA_intronic	FAM86JP	NA	NA	NA	ncRNA_intronic	ENSG00000171084	NA	NA	NA	NA	NA	3q21.2	NA	NA	NA	NA	rs2062773	0.21	0.21	0.219	0.271366	0.17	0.1071	0.1801	0.612	0.1493	0.15	0.09	0.18	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.496488	NA	NA	NA	NA	NA	0.029	NA	4.4966666
1202	14	106452766	106452766	T	A	intergenic	ADAM6,LINC00226	dist=14408;dist=291503	NA	NA	exonic	ENSG00000211934	NA	nonsynonymous SNV	ENSG00000211934:ENST00000390594:exon2:c.A256T:p.R86W	NA	NA	14q32.33	NA	NA	Name=4	NA	rs112806369	0.33	0.33	0.3	0.321086	0.4642	0.3095	0.3516	0.1831	0.3507	0.46	0.31	0.31	0.17	0.4144	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.624764	NA	0.04	0.458085	0.232082	ID=COSN229338,COSN229337;OCCURENCE=1(skin)	0.152	NA	4.4966484
1202	19	51109793	51109793	C	A	intergenic	SNAR-F,SYT3	dist=1451;dist=15441	NA	NA	intergenic	ENSG00000131409,ENSG00000213023	dist=38491;dist=14771	NA	NA	NA	NA	19q13.33	NA	Name=SP1,E2F6,NF-YA,ZBTB33,CTCF,CHD2_(N-1250),NF-YB	Name=27	NA	rs1895373	0.73	0.73	0.729	0.722444	0.837	0.3869	0.8012	0.9009	0.6534	0.84	0.4	0.8	0.9	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.479216	NA	NA	NA	NA	NA	0.826	NA	4.4963334
1202	6	33752013	33752013	A	G	intronic	LEMD2	NA	NA	NA	intronic	ENSG00000161904	NA	NA	NA	NA	NA	6p21.31	NA	NA	Name=8	NA	rs943479	0.53	0.53	0.496	0.55012	0.504	0.8304	0.4755	0.3086	0.6881	0.52	0.81	0.46	0.26	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.785091	NA	NA	NA	NA	NA	0.594	NA	4.496
1202	6	51936846	51936846	T	C	intronic	PKHD1	NA	NA	NA	intronic	ENSG00000170927	NA	NA	NA	NA	NA	6p12.2	NA	NA	Name=4	NA	rs3936986	0.41	0.41	0.355	0.355831	0.504	0.3998	0.6023	0.1097	0.316	0.51	0.41	0.59	0.13	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.715109	NA	NA	NA	NA	NA	0.464	NA	4.496
1202	6	101337780	101337780	C	G	intergenic	ASCC3,GRIK2	dist=8556;dist=509081	NA	NA	ncRNA_exonic	ENSG00000270987	NA	NA	NA	Score=420;Name=lod=68	NA	6q16.3	NA	NA	NA	NA	rs9498420	0.5	0.5	0.495	0.481629	0.504	0.7063	0.6023	0.3275	0.3497	0.46	0.7	0.52	0.3	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.419372	NA	NA	NA	NA	NA	0.225	NA	4.496
1202	17	5415684	5415684	A	C	intronic	NLRP1	NA	NA	NA	intronic	ENSG00000091592	NA	NA	NA	Score=642;Name=lod=544	NA	17p13.2	NA	NA	NA	NA	rs9912217	0.72	0.72	0.735	0.75	0.504	0.9841	0.4856	0.9145	0.727	0.51	0.99	0.48	0.9	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.865797	NA	NA	NA	NA	NA	0.652	NA	4.496
1202	6	70964745	70964745	G	T	intronic	COL9A1	NA	NA	NA	intronic	ENSG00000112280	NA	NA	NA	NA	NA	6q13	NA	Name=GR	NA	NA	rs13219431	0.09	0.09	0.087	0.0561102	0.1789	0.002	0.0764	0.0076	0.0368	0.2	0.0017	0.09	0.01	0.1339	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.02796	2.02796	NA	0.191279	0.03586	NA	0.181	NA	4.495921
1202	4	152624972	152624972	A	G	intronic	PET112	NA	NA	NA	exonic	ENSG00000059691	NA	synonymous SNV	ENSG00000059691:ENST00000512306:exon8:c.T1038C:p.Y346Y	NA	NA	4q31.3	NA	NA	NA	NA	rs28706249	0.12	0.12	0.12	0.1248	0.1074	0.12	0.085	0.2337	0.0286	0.11	0.09	0.07	0.19	0.1093	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.436038	NA	NA	0.12093	0.214707	NA	0.123	NA	4.4957033
1202	3	88145070	88145070	C	T	intronic	CGGBP1	NA	NA	NA	ncRNA_exonic	ENSG00000241535	NA	NA	NA	Score=435;Name=lod=78	NA	3p11.1	NA	NA	NA	NA	rs9310074	0.71	0.71	0.674	0.69369	0.838	0.8333	0.804	0.2617	0.907	0.83	0.86	0.82	0.29	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.485442	NA	NA	NA	NA	NA	0.594	NA	4.4953333
1202	3	108110570	108110570	G	A	intronic	MYH15	NA	NA	NA	intronic	ENSG00000144821	NA	NA	NA	NA	NA	3q13.13	NA	NA	Name=2	NA	rs74660263	0.1	0.1	0.081	0.0734824	0.1879	NA	0.1268	0.0098	0.0798	0.21	NA	0.15	0.02	0.1338	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.289828	NA	NA	0.18316	0.036179	NA	0.087	NA	4.49514
1202	5	117054860	117054860	C	T	intergenic	LOC728342,DTWD2	dist=139421;dist=1117709	NA	NA	downstream	ENSG00000251477	NA	NA	NA	Score=760;Name=lod=1636	NA	5q23.1	NA	NA	NA	NA	rs184352463	0.0032	0.0032	NA	0.00299521	0.005	NA	0.0086	0.0015	0.002	0.0026	NA	0.01	0.002	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.888163	NA	NA	NA	NA	NA	NA	NA	4.495
1202	7	18002126	18002126	A	C	intergenic	SNX13,PRPS1L1	dist=21995;dist=64274	NA	NA	ncRNA_exonic	ENSG00000236195	NA	NA	NA	Score=682;Name=lod=789	NA	7p21.1	NA	NA	NA	NA	rs13224298	0.4	0.4	0.345	0.331869	0.505	0.3363	0.5159	0.18	0.2239	0.54	0.34	0.5	0.16	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.040428	NA	NA	NA	NA	NA	0.275	NA	4.495
1202	9	14040837	14040837	A	C	intergenic	LINC00583,NFIB	dist=95231;dist=41005	NA	NA	ncRNA_exonic	ENSG00000223568	NA	NA	NA	Score=653;Name=lod=602	NA	9p23	NA	NA	NA	NA	rs1853199	0.62	0.62	0.603	0.615815	0.505	0.9524	0.4337	0.5197	0.6421	0.53	0.95	0.45	0.49	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.463502	NA	NA	NA	NA	NA	0.428	NA	4.495
1202	12	52646941	52646941	C	G	intergenic	KRT7,KRT81	dist=4232;dist=32756	NA	NA	ncRNA_intronic	ENSG00000135477	NA	NA	NA	NA	NA	12q13.13	NA	Name=Pol2,Pol2(phosphoS2)	NA	NA	rs3741722	0.53	0.53	0.509	0.558906	0.505	0.6865	0.5778	0.3835	0.7065	0.52	0.66	0.52	0.42	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.172478	NA	NA	NA	NA	NA	0.601	NA	4.495
1202	14	100993219	100993219	T	C	intronic	WDR25	NA	NA	NA	intronic	ENSG00000176473	NA	NA	NA	NA	NA	14q32.2	NA	Name=SUZ12,c-Myc	NA	NA	rs62637671	NA	NA	NA	0.512181	0.505	0.5298	0.5202	0.5053	0.5051	NA	NA	NA	NA	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.89257	NA	NA	NA	NA	NA	0.406	NA	4.495
1202	15	23182267	23182267	G	A	intergenic	LOC283683,WHAMMP3	dist=67013;dist=5462	NA	NA	ncRNA_exonic	ENSG00000259174	NA	NA	NA	Score=656;Name=lod=616	NA	15q11.2	NA	NA	NA	NA	rs12050782	0.54	0.54	0.493	0.507588	0.505	0.8125	0.5403	0.1989	0.59	0.55	0.79	0.54	0.21	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.120706	NA	NA	NA	NA	NA	0.377	NA	4.495
1203	3	125647341	125647341	A	G	ncRNA_exonic	FAM86JP	NA	NA	NA	ncRNA_exonic	ENSG00000171084	NA	NA	NA	NA	NA	3q21.2	NA	NA	NA	NA	rs1976460	0.22	0.22	0.234	0.240815	0.172	0.1071	0.1542	0.5098	0.1472	0.16	0.1	0.17	0.48	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.10375	NA	NA	NA	NA	NA	0.167	NA	4.4946666
1203	3	125647486	125647486	A	T	ncRNA_exonic	FAM86JP	NA	NA	NA	ncRNA_exonic	ENSG00000171084	NA	NA	NA	NA	NA	3q21.2	NA	NA	NA	NA	rs1976459	0.21	0.21	0.254	0.240815	0.172	0.1071	0.1542	0.5098	0.1472	0.15	0.07	0.15	0.51	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.333143	NA	NA	NA	NA	NA	0.225	NA	4.4946666
1203	3	125647512	125647512	T	G	ncRNA_exonic	FAM86JP	NA	NA	NA	ncRNA_exonic	ENSG00000171084	NA	NA	NA	NA	NA	3q21.2	NA	NA	NA	NA	rs1976458	0.21	0.21	0.234	0.240216	0.172	0.1071	0.1542	0.5076	0.1472	0.14	0.07	0.15	0.5	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.270001	NA	NA	NA	NA	NA	0.217	NA	4.4946666
1203	22	43930825	43930825	C	T	ncRNA_exonic	EFCAB6-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000223843	NA	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs4585129	0.12	0.12	0.111	0.0986422	0.172	0.0288	0.1066	0.0847	0.1084	0.18	0.03	0.12	0.12	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.079423	NA	NA	NA	NA	NA	0.188	NA	4.4946666
1203	6	70916888	70916888	A	C	exonic	COL19A1	NA	synonymous SNV	COL19A1:NM_001858:exon51:c.A3339C:p.P1113P	exonic	ENSG00000082293	NA	synonymous SNV	ENSG00000082293:ENST00000393344:exon38:c.A2205C:p.P735P,ENSG00000082293:ENST00000322773:exon51:c.A3339C:p.P1113P	Score=554;Name=lod=237	NA	6q13	NA	NA	NA	NA	rs1200576	0.75	0.75	0.751	0.758786	0.7107	0.6974	0.8559	0.8419	0.6902	0.71	0.68	0.83	0.83	0.7351	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.898206	NA	NA	0.726279	0.819564	NA	0.855	NA	4.4945876
1203	6	56484758	56484758	C	T	exonic	DST	NA	synonymous SNV	DST:NM_001723:exon23:c.G4074A:p.K1358K	exonic	ENSG00000151914	NA	synonymous SNV	ENSG00000151914:ENST00000370765:exon23:c.G4074A:p.K1358K	NA	NA	6p12.1	NA	NA	NA	NA	rs2230862	0.35	0.35	0.341	0.336462	0.3946	0.2034	0.3746	0.4523	0.2301	0.38	0.2	0.39	0.46	0.361	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.124682	NA	NA	0.416744	0.435315	NA	0.384	NA	4.4943226
1203	7	91713972	91713972	C	T	exonic	AKAP9	NA	synonymous SNV	AKAP9:NM_005751:exon34:c.C8665T:p.L2889L,AKAP9:NM_147185:exon34:c.C8641T:p.L2881L	exonic	ENSG00000127914	NA	synonymous SNV	ENSG00000127914:ENST00000394534:exon8:c.C2203T:p.L735L,ENSG00000127914:ENST00000356239:exon34:c.C8665T:p.L2889L	NA	NA	7q21.2	NA	NA	NA	NA	rs10228334	0.36	0.36	0.364	0.373802	0.3867	0.1617	0.3573	0.5076	0.41	0.39	0.17	0.38	0.53	0.3832	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.635955	NA	NA	0.402749	0.515433	NA	0.413	NA	4.4940176
1203	3	80266208	80266208	C	T	intergenic	ROBO1,GBE1	dist=449149;dist=1272642	NA	NA	ncRNA_exonic	ENSG00000239699	NA	NA	NA	Score=419;Name=lod=67	NA	3p12.2	NA	NA	NA	NA	rs17749340	0.6	0.6	0.624	0.606829	0.506	0.6746	0.438	0.8608	0.4172	0.5	0.66	0.44	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.028015	NA	NA	NA	NA	NA	0.703	NA	4.494
1203	6	19613078	19613078	T	C	intergenic	MIR548A1,ID4	dist=1040967;dist=224523	NA	NA	ncRNA_exonic	ENSG00000214012	NA	NA	NA	Score=325;Name=lod=28	NA	6p22.3	NA	NA	NA	NA	rs1936905	0.4	0.4	0.326	0.407149	0.506	0.2867	0.4611	0.388	0.4172	0.49	0.25	0.48	0.37	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.647644	NA	NA	NA	NA	NA	0.565	NA	4.494
1203	6	19613709	19613709	C	T	intergenic	MIR548A1,ID4	dist=1041598;dist=223892	NA	NA	ncRNA_exonic	ENSG00000214012	NA	NA	NA	Score=476;Name=lod=115	NA	6p22.3	NA	NA	NA	NA	rs9348387	0.4	0.4	0.374	0.407149	0.506	0.2867	0.4597	0.388	0.4182	0.49	0.25	0.48	0.38	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.126065	NA	NA	NA	NA	NA	0.58	NA	4.494
1203	20	5273253	5273253	G	A	intergenic	CDS2,PROKR2	dist=94720;dist=9433	NA	NA	ncRNA_exonic	ENSG00000225022	NA	NA	NA	Score=769;Name=lod=1781	NA	20p12.3	NA	NA	NA	NA	rs7271296	0.56	0.56	0.545	0.572085	0.506	0.5784	0.5086	0.6596	0.5603	0.51	0.55	0.51	0.69	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.828034	1.828034	NA	NA	NA	NA	0.486	NA	4.494
1203	20	5273314	5273314	C	T	intergenic	CDS2,PROKR2	dist=94781;dist=9372	NA	NA	ncRNA_exonic	ENSG00000225022	NA	NA	NA	Score=769;Name=lod=1781	NA	20p12.3	NA	NA	NA	NA	rs6038126	0.56	0.56	0.55	0.571685	0.506	0.5784	0.5086	0.6581	0.5603	0.51	0.55	0.51	0.69	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.523773	1.523773	NA	NA	NA	NA	0.486	NA	4.494
1203	20	5273382	5273382	G	A	intergenic	CDS2,PROKR2	dist=94849;dist=9304	NA	NA	ncRNA_exonic	ENSG00000225022	NA	NA	NA	Score=769;Name=lod=1781	NA	20p12.3	NA	NA	NA	NA	rs2234397	0.56	0.56	0.543	0.572085	0.506	0.5784	0.5086	0.6596	0.5603	0.51	0.55	0.51	0.69	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.255356	1.255356	NA	NA	NA	NA	0.486	NA	4.494
1203	1	235940450	235940450	C	T	exonic	LYST	NA	synonymous SNV	LYST:NM_000081:exon17:c.G5373A:p.K1791K	exonic	ENSG00000143669	NA	synonymous SNV	ENSG00000143669:ENST00000389793:exon17:c.G5373A:p.K1791K,ENSG00000143669:ENST00000389794:exon17:c.G5373A:p.K1791K	NA	NA	1q42.3	NA	NA	NA	NA	rs2273584	0.33	0.33	0.313	0.300919	0.4254	0.0655	0.2997	0.4871	0.1646	0.42	0.09	0.31	0.49	0.3483	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.361018	NA	NA	0.399302	0.505901	NA	0.355	NA	4.4936646
1203	6	24523174	24523174	G	A	intronic	ALDH5A1	NA	NA	NA	intronic	ENSG00000112294	NA	NA	NA	NA	NA	6p22.3	NA	Name=MafF_(M8194),MafK_(SC-477),MafK_(ab50322)	NA	NA	rs67603730	0.16	0.16	0.152	0.168331	0.1918	0.1042	0.1239	0.2057	0.1912	0.19	0.09	0.14	0.22	0.1616	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.481483	NA	NA	0.153488	0.184748	ID=COSN167708;OCCURENCE=1(large_intestine)	0.225	NA	4.493112
1203	2	207101466	207101466	C	T	intergenic	GPR1,ZDBF2	dist=18695;dist=38057	NA	NA	ncRNA_exonic	ENSG00000159186	NA	NA	NA	Score=439;Name=lod=81	NA	2q33.3	NA	NA	NA	NA	rs959109	0.45	0.45	0.472	0.565495	0.507	0.5109	0.6037	0.6437	0.5491	0.4	0.44	0.51	0.48	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.5759	NA	NA	NA	NA	NA	NA	NA	4.493
1203	2	207101467	207101467	A	G	intergenic	GPR1,ZDBF2	dist=18696;dist=38056	NA	NA	ncRNA_exonic	ENSG00000159186	NA	NA	NA	Score=439;Name=lod=81	NA	2q33.3	NA	NA	NA	NA	rs726164	0.44	0.44	0.474	0.565495	0.507	0.5099	0.6037	0.6445	0.5491	0.39	0.44	0.51	0.48	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.050984	NA	NA	NA	NA	NA	NA	NA	4.493
1203	5	77080789	77080789	G	A	intergenic	TBCA,AP3B1	dist=8604;dist=217361	NA	NA	ncRNA_exonic	ENSG00000213763	NA	NA	NA	Score=867;Name=lod=4445	NA	5q14.1	NA	NA	NA	NA	rs254405	0.36	0.36	0.383	0.375998	0.507	0.1111	0.3559	0.4539	0.4233	0.48	0.13	0.36	0.42	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.598662	NA	NA	NA	NA	NA	0.297	NA	4.493
1203	13	90823859	90823859	C	T	intergenic	LINC00559,MIR622	dist=51888;dist=59577	NA	NA	ncRNA_exonic	ENSG00000235879	NA	NA	NA	Score=789;Name=lod=2137	NA	13q31.3	NA	NA	NA	NA	rs9555981	0.6	0.6	0.607	0.625399	0.507	0.621	0.5331	0.733	0.6718	0.53	0.62	0.57	0.72	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.256402	2.256402	NA	NA	NA	NA	0.659	NA	4.493
1203	17	42009916	42009916	C	T	intergenic	FAM215A,PPY	dist=14561;dist=8256	NA	NA	ncRNA_exonic	ENSG00000267420	NA	NA	NA	Score=627;Name=lod=469	NA	17q21.31	NA	NA	NA	NA	rs2543104	0.27	0.27	0.235	0.238818	0.507	0.0972	0.2997	0.0635	0.3027	0.51	0.07	0.33	0.07	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.611805	2.611805	NA	NA	NA	NA	0.254	NA	4.493
1203	20	29449502	29449502	A	G	intergenic	NONE,FRG1B	dist=NONE;dist=162377	NA	NA	ncRNA_exonic	ENSG00000204555	NA	NA	NA	Score=454;Name=lod=93	NA	20q11.21	NA	NA	NA	NA	rs4010663	NA	NA	0.352	0.515575	0.507	0.502	0.5159	0.5378	0.5082	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.45261	NA	NA	NA	NA	NA	NA	NA	4.493
1203	12	52938535	52938535	A	G	intronic	KRT71	NA	NA	NA	intronic	ENSG00000139648	NA	NA	NA	NA	NA	12q13.13	NA	Name=CTCF,c-Myc	Name=8	NA	rs10783519	0.41	0.41	0.348	0.351637	0.5129	0.5258	0.4813	0.0424	0.3323	0.52	0.5	0.51	0.08	0.4828	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.29887	NA	NA	0.51151	0.134677	NA	0.406	NA	4.49279
1203	1	119157211	119157211	G	T	intergenic	SPAG17,TBX15	dist=429363;dist=268455	NA	NA	ncRNA_exonic	ENSG00000226126	NA	NA	NA	Score=838;Name=lod=3396	NA	1p12	NA	NA	NA	NA	rs1742854	0.39	0.39	0.396	0.392173	0.508	0.246	0.3977	0.3805	0.4356	0.5	0.26	0.41	0.37	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.102543	NA	NA	NA	NA	NA	0.58	NA	4.492
1203	1	119158186	119158186	C	T	intergenic	SPAG17,TBX15	dist=430338;dist=267480	NA	NA	ncRNA_exonic	ENSG00000226126	NA	NA	NA	Score=838;Name=lod=3396	NA	1p12	NA	NA	NA	NA	rs1701978	0.39	0.39	0.404	0.391374	0.508	0.246	0.3977	0.3805	0.4315	0.5	0.26	0.41	0.37	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.118018	NA	NA	NA	NA	NA	0.58	NA	4.492
1203	5	16694349	16694349	T	C	intronic	MYO10	NA	NA	NA	intronic	ENSG00000145555	NA	NA	NA	NA	NA	5p15.1	NA	NA	Name=31	NA	rs25911	0.54	0.54	0.516	0.535942	0.508	0.5109	0.5648	0.5666	0.5286	0.5	0.53	0.57	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.136218	NA	NA	NA	NA	NA	0.522	NA	4.492
1203	5	126506652	126506652	G	A	intergenic	C5orf63,MEGF10	dist=97468;dist=119804	NA	NA	ncRNA_exonic	ENSG00000250080	NA	NA	NA	Score=730;Name=lod=1238	NA	5q23.2	NA	NA	NA	NA	rs248075	0.41	0.41	0.414	0.375399	0.508	0.2996	0.3847	0.3525	0.3415	0.5	0.34	0.44	0.34	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.282848	NA	NA	NA	NA	NA	0.355	NA	4.492
1203	5	126507382	126507382	G	A	intergenic	C5orf63,MEGF10	dist=98198;dist=119074	NA	NA	ncRNA_exonic	ENSG00000250080	NA	NA	NA	Score=762;Name=lod=1663	NA	5q23.2	NA	NA	NA	NA	rs248078	0.45	0.45	0.469	0.41873	0.508	0.2996	0.3905	0.5136	0.3415	0.5	0.34	0.44	0.51	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.102664	NA	NA	NA	NA	NA	0.399	NA	4.492
1203	7	126935799	126935799	G	A	intergenic	GRM8,ZNF800	dist=43371;dist=74555	NA	NA	ncRNA_exonic	ENSG00000236105	NA	NA	NA	Score=568;Name=lod=272	NA	7q31.33	NA	NA	NA	NA	rs2018937	0.51	0.51	0.542	0.508786	0.508	0.1716	0.4222	0.9349	0.3425	0.5	0.19	0.43	0.94	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.054264	NA	NA	NA	NA	NA	0.58	NA	4.492
1203	9	14041071	14041071	T	C	intergenic	LINC00583,NFIB	dist=95465;dist=40771	NA	NA	ncRNA_exonic	ENSG00000223568	NA	NA	NA	Score=790;Name=lod=2170	NA	9p23	NA	NA	NA	NA	rs10511588	0.63	0.63	0.634	0.633786	0.508	0.9514	0.4352	0.5847	0.6431	0.53	0.95	0.45	0.55	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.000098	NA	NA	NA	NA	NA	0.457	NA	4.492
1203	13	90823449	90823449	T	C	intergenic	LINC00559,MIR622	dist=51478;dist=59987	NA	NA	ncRNA_exonic	ENSG00000235879	NA	NA	NA	Score=789;Name=lod=2137	NA	13q31.3	NA	NA	NA	NA	rs9560568	0.53	0.53	0.526	0.542931	0.508	0.62	0.5058	0.4342	0.6728	0.53	0.62	0.55	0.43	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.363648	NA	NA	NA	NA	NA	0.522	NA	4.492
1203	17	42009756	42009756	G	A	intergenic	FAM215A,PPY	dist=14401;dist=8416	NA	NA	ncRNA_intronic	ENSG00000267420	NA	NA	NA	Score=265;Name=lod=16	NA	17q21.31	NA	NA	NA	NA	rs12602821	0.27	0.27	0.242	0.244409	0.508	0.0972	0.3012	0.084	0.3016	0.51	0.07	0.33	0.08	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.051061	NA	NA	NA	NA	NA	0.275	NA	4.492
1203	6	32521700	32521700	G	A	ncRNA_exonic	HLA-DRB6	NA	NA	NA	ncRNA_exonic	ENSG00000229391	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs61104187	0.15	0.15	0.11	0.131589	0.175	0.0992	0.1801	0.1271	0.092	0.19	0.07	0.22	0.13	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.556953	NA	NA	NA	NA	ID=COSN167734;OCCURENCE=1(large_intestine)	0.036	NA	4.4916666
1203	21	46057958	46057958	C	T	exonic	KRTAP10-10	NA	synonymous SNV	KRTAP10-10:NM_181688:exon1:c.C624T:p.S208S	exonic	ENSG00000221859	NA	synonymous SNV	ENSG00000221859:ENST00000380095:exon1:c.C624T:p.S208S	Score=272;Name=lod=17	NA	21q22.3	NA	NA	NA	NA	rs4818951	0.64	0.64	0.559	0.640176	0.7594	0.6687	0.6931	0.4092	0.7628	0.75	0.65	0.7	0.43	0.7023	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.996075	NA	NA	0.713488	0.443032	NA	0.319	NA	4.4914786
1203	5	167933215	167933215	A	G	intronic	RARS	NA	NA	NA	intronic	ENSG00000113643	NA	NA	NA	Score=481;Name=lod=120	NA	5q34	NA	NA	NA	NA	rs2305735	0.1	0.1	0.088	0.0744808	0.1799	0.0645	0.0908	0.0098	0.0521	0.18	0.08	0.11	0.02	0.1401	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.481532	1.481532	NA	0.188837	0.036541	NA	0.058	NA	4.491163
1203	2	207101446	207101446	G	A	intergenic	GPR1,ZDBF2	dist=18675;dist=38077	NA	NA	ncRNA_exonic	ENSG00000159186	NA	NA	NA	Score=439;Name=lod=81	NA	2q33.3	NA	NA	NA	NA	rs726165	0.6	0.6	0.591	0.624601	0.5089	0.5119	0.6167	0.8585	0.5491	0.5	0.5	0.59	0.85	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.088859	NA	NA	NA	NA	NA	0.565	NA	4.4911
1203	3	97611916	97611916	A	C	intronic	CRYBG3	NA	NA	NA	intronic	ENSG00000080200	NA	NA	NA	NA	NA	3q11.2	NA	Name=MafK_(ab50322),MafF_(M8194),MafK_(SC-477)	NA	NA	rs1506441	0.5	0.5	0.491	0.474441	0.5089	0.6776	0.5043	0.2526	0.5082	0.52	0.72	0.45	0.26	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.452109	NA	NA	NA	NA	NA	0.442	NA	4.4911
1203	9	90432270	90432270	G	C	intergenic	CTSL3P,CTSL1P8	dist=30471;dist=27390	NA	NA	ncRNA_exonic	ENSG00000232743	NA	NA	NA	Score=606;Name=lod=386	NA	9q22.1	NA	NA	NA	NA	rs13283130	0.28	0.28	0.25	0.240815	0.5089	0.003	0.3718	0.1589	0.228	0.5	0.0017	0.4	0.17	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.241967	NA	NA	NA	NA	NA	0.138	NA	4.4911
1203	17	38066240	38066240	T	C	intronic	GSDMB	NA	NA	NA	intronic	ENSG00000073605	NA	NA	NA	NA	Name=Type 1 diabetes	17q12	NA	NA	NA	NA	rs2290400	0.45	0.45	0.439	0.420527	0.5089	0.2937	0.4049	0.4894	0.3783	0.52	0.33	0.42	0.49	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.075381	NA	NA	NA	NA	NA	0.457	NA	4.4911
1203	17	39564507	39564507	C	G	ncRNA_intronic	LOC100505782	NA	NA	NA	ncRNA_exonic	ENSG00000225438	NA	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs2071615	0.18	0.18	0.168	0.173323	0.1759	0.3482	0.1254	0.0333	0.2137	0.18	0.33	0.13	0.04	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.657917	NA	NA	NA	NA	NA	0.109	NA	4.4907666
1203	19	50475458	50475458	T	A	ncRNA_intronic	SIGLEC16	NA	NA	NA	ncRNA_intronic	ENSG00000161643	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs34653225	0.22	0.22	0.242	0.194089	0.1759	0.3323	0.1527	0.1717	0.1299	0.18	0.32	0.17	0.2	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.245957	NA	NA	NA	NA	NA	0.152	NA	4.4907666
1203	19	50475466	50475466	G	A	ncRNA_intronic	SIGLEC16	NA	NA	NA	ncRNA_intronic	ENSG00000161643	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs55752562	0.22	0.22	0.239	0.19369	0.1759	0.3313	0.1527	0.1717	0.1288	0.18	0.32	0.17	0.2	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.135338	NA	NA	NA	NA	NA	0.152	NA	4.4907666
1203	1	24673866	24673866	A	G	intronic	GRHL3	NA	NA	NA	intronic	ENSG00000158055	NA	NA	NA	NA	NA	1p36.11	NA	Name=TBP	NA	NA	rs6691722	0.57	0.57	0.555	0.577276	0.5099	0.5	0.6268	0.708	0.5143	0.52	0.5	0.6	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.68526	NA	NA	NA	NA	NA	0.514	NA	4.4901
1203	1	153004721	153004721	A	T	intronic	SPRR1B	NA	NA	NA	intronic	ENSG00000169469	NA	NA	NA	NA	NA	1q21.3	NA	Name=PAX5-N19	NA	NA	rs1334848	0.52	0.52	0.525	0.49401	0.5099	0.5913	0.4251	0.4402	0.499	0.51	0.62	0.46	0.46	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.229006	NA	NA	NA	NA	NA	0.457	NA	4.4901
1203	12	45465934	45465934	C	T	intergenic	RACGAP1P,PLEKHA8P1	dist=6740;dist=100883	NA	NA	ncRNA_exonic	ENSG00000257572	NA	NA	NA	Score=601;Name=lod=368	NA	12q12	NA	NA	NA	NA	rs3858731	0.46	0.46	0.458	0.466853	0.5099	0.6508	0.3401	0.177	0.7147	0.51	0.69	0.39	0.19	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.971619	1.971619	NA	NA	NA	NA	0.29	NA	4.4901
1203	14	95923806	95923806	T	C	intronic	SYNE3	NA	NA	NA	intronic	ENSG00000176438	NA	NA	NA	NA	NA	14q32.13	NA	NA	Name=23	NA	rs8007606	0.63	0.63	0.606	0.638578	0.5099	0.5813	0.6945	0.8381	0.5204	0.51	0.59	0.68	0.83	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.512232	NA	NA	NA	NA	NA	0.696	NA	4.4901
1203	1	155006091	155006091	A	G	exonic	DCST2	NA	synonymous SNV	DCST2:NM_144622:exon1:c.T87C:p.G29G	exonic	ENSG00000163354	NA	synonymous SNV	ENSG00000163354:ENST00000295536:exon1:c.T87C:p.G29G,ENSG00000163354:ENST00000368424:exon1:c.T87C:p.G29G,ENSG00000163354:ENST00000485982:exon1:c.T87C:p.G29G	NA	NA	1q22	NA	NA	NA	NA	rs10908453	0.57	0.57	0.534	0.598842	0.3608	0.881	0.6052	0.5416	0.6258	0.36	0.9	0.55	0.53	0.4681	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.410262	NA	NA	0.348488	0.531548	NA	0.486	NA	4.4892786
1203	3	78717508	78717508	G	A	intronic	ROBO1	NA	NA	NA	intronic	ENSG00000169855	NA	NA	NA	NA	NA	3p12.3	NA	Name=TCF4,FOXA1_(C-20)	NA	NA	rs2255164	0.38	0.38	0.352	0.381589	0.5109	0.2252	0.4236	0.3449	0.4294	0.51	0.22	0.46	0.33	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.003072	NA	NA	NA	NA	NA	0.457	NA	4.4891
1203	6	158658788	158658788	T	C	intergenic	GTF2H5,TULP4	dist=38412;dist=74904	NA	NA	ncRNA_exonic	ENSG00000188451	NA	NA	NA	Score=684;Name=lod=801	NA	6q25.3	NA	NA	NA	NA	rs661857	0.51	0.51	0.488	0.461861	0.5109	0.5526	0.5519	0.3464	0.41	0.52	0.58	0.51	0.39	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.949032	NA	NA	NA	NA	NA	0.464	NA	4.4891
1203	9	29825925	29825925	T	C	intergenic	LINGO2,LOC401497	dist=612927;dist=563008	NA	NA	ncRNA_exonic	ENSG00000230097	NA	NA	NA	Score=738;Name=lod=1331	NA	9p21.1	NA	NA	NA	NA	rs10969394	0.44	0.44	0.389	0.361222	0.5109	0.5536	0.5058	0.1006	0.2587	0.53	0.57	0.48	0.11	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.030209	NA	NA	NA	NA	NA	0.449	NA	4.4891
1203	9	29826502	29826502	A	T	intergenic	LINGO2,LOC401497	dist=613504;dist=562431	NA	NA	ncRNA_exonic	ENSG00000230097	NA	NA	NA	Score=295;Name=lod=21	NA	9p21.1	NA	NA	NA	NA	rs10813177	0.47	0.47	0.426	0.414936	0.5109	0.5536	0.5187	0.2806	0.2812	0.53	0.57	0.49	0.25	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.674202	NA	NA	NA	NA	NA	0.5	NA	4.4891
1203	9	135776034	135776034	C	T	intronic	TSC1	NA	NA	NA	intronic	ENSG00000165699	NA	NA	NA	NA	Name=Psoriasis	9q34.13	NA	NA	NA	NA	rs1076160	0.41	0.41	0.373	0.41234	0.5109	0.5585	0.4496	0.0545	0.6176	0.52	0.55	0.46	0.07	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.006948	NA	NA	NA	NA	NA	0.355	NA	4.4891
1203	11	6629530	6629530	G	A	intronic	ILK	NA	NA	NA	intronic	ENSG00000166333	NA	NA	NA	NA	NA	11p15.4	NA	Name=Pol2	NA	NA	rs2048092	0.51	0.51	0.51	0.477236	0.5109	0.4355	0.4755	0.553	0.3845	0.51	0.45	0.49	0.59	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.873559	NA	NA	NA	NA	NA	0.58	NA	4.4891
1203	11	95569183	95569183	G	A	intronic	MTMR2	NA	NA	NA	intronic	ENSG00000087053	NA	NA	NA	NA	NA	11q21	NA	Name=CTCF	NA	NA	rs499637	0.57	0.57	0.606	0.577276	0.5109	0.3442	0.4942	0.9297	0.4683	0.51	0.39	0.54	0.92	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.819828	NA	NA	NA	NA	NA	0.601	NA	4.4891
1203	14	95078677	95078677	G	T	upstream	SERPINA3	NA	NA	NA	UTR5	ENSG00000196136	ENST00000553947:c.-41G>T	NA	NA	NA	NA	14q32.13	NA	Name=TBP,HEY1,HDAC2_(SC-6296),STAT3,p300,FOXA2_(SC-6554),TCF4,Pol2	Name=58	NA	rs1884082	0.48	0.48	0.474	0.446685	0.5109	0.6429	0.3213	0.3185	0.4407	0.51	0.67	0.34	0.31	0.5041	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.098033	NA	NA	0.49598	0.34589	NA	0.58	NA	4.48902
1203	11	16505597	16505597	G	C	intergenic	SOX6,C11orf58	dist=7662;dist=254551	NA	NA	intronic	ENSG00000110693	NA	NA	NA	Score=644;Name=lod=554	NA	11p15.1	NA	NA	NA	NA	rs11023960	0.28	0.28	0.256	0.315096	0.1779	0.5188	0.219	0.2148	0.4499	0.16	0.52	0.27	0.2	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.107801	NA	NA	NA	NA	NA	0.254	NA	4.4887667
1203	1	111825754	111825754	C	T	ncRNA_intronic	CHIAP2	NA	NA	NA	ncRNA_intronic	ENSG00000203878	NA	NA	NA	NA	NA	1p13.2	NA	NA	NA	NA	rs4351635	0.21	0.21	0.163	0.217452	0.1779	0.3938	0.366	0.0333	0.2198	0.17	0.33	0.36	0.03	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.399559	NA	NA	NA	NA	NA	0.109	NA	4.4887666
1203	20	210061	210061	G	A	exonic	DEFB129	NA	synonymous SNV	DEFB129:NM_080831:exon2:c.G201A:p.L67L	exonic	ENSG00000125903	NA	synonymous SNV	ENSG00000125903:ENST00000246105:exon2:c.G201A:p.L67L	NA	NA	20p13	NA	NA	NA	NA	rs13045643	0.28	0.28	0.255	0.270168	0.3907	0.2857	0.3761	0.0333	0.3753	0.39	0.27	0.39	0.04	0.3728	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.09941	NA	NA	0.414767	0.08965	ID=COSM149121;OCCURENCE=1(stomach)	0.167	NA	4.4883996
1203	9	109932907	109932907	C	T	intergenic	MIR548Q,RAD23B	dist=84191;dist=112610	NA	NA	ncRNA_exonic	ENSG00000226535	NA	NA	NA	Score=657;Name=lod=624	NA	9q31.2	NA	NA	NA	NA	rs10759213	0.58	0.58	0.569	0.569289	0.5119	0.6538	0.5231	0.5552	0.593	0.52	0.68	0.53	0.57	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.844133	1.844133	NA	NA	NA	NA	0.551	NA	4.4881
1203	22	50694297	50694297	A	G	exonic	MAPK12	NA	synonymous SNV	MAPK12:NM_002969:exon8:c.T633C:p.S211S	exonic	ENSG00000188130	NA	synonymous SNV	ENSG00000188130:ENST00000395780:exon6:c.T363C:p.S121S,ENSG00000188130:ENST00000215659:exon8:c.T633C:p.S211S	NA	NA	22q13.33	Score=859;Name=V$TAL1BETAITF2_01	NA	NA	NA	rs1129880	0.79	0.79	0.787	0.844649	0.6998	0.869	0.8127	0.9002	0.9162	0.7	0.86	0.77	0.88	0.7746	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.705104	NA	NA	0.704281	0.862108	NA	0.848	NA	4.4879856
1203	22	38822759	38822759	C	T	UTR3	KCNJ4	NM_004981:c.*41G>A,NM_152868:c.*41G>A	NA	NA	ncRNA_UTR3	ENSG00000168135	NA	NA	NA	NA	NA	22q13.1	NA	NA	NA	NA	rs113171101	NA	NA	NA	0.000798722	0.003	NA	NA	0.0008	NA	NA	NA	NA	NA	0.0033	0.0064	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.449821	NA	NA	0.006442	0.000457	NA	NA	NA	4.487258
1203	1	75672376	75672376	A	G	exonic	SLC44A5	NA	synonymous SNV	SLC44A5:NM_152697:exon24:c.T2076C:p.S692S	exonic	ENSG00000137968	NA	synonymous SNV	ENSG00000137968:ENST00000535611:exon21:c.T1686C:p.S562S,ENSG00000137968:ENST00000370855:exon24:c.T2076C:p.S692S	NA	NA	1p31.1	NA	NA	NA	NA	rs1948874	0.48	0.48	0.471	0.440695	0.3966	0.8323	0.4669	0.177	0.4202	0.41	0.85	0.46	0.19	0.4054	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.545833	NA	NA	0.377558	0.207217	NA	0.471	NA	4.4871086
1203	1	176200923	176200923	C	T	intergenic	RFWD2,PAPPA2	dist=24553;dist=231384	NA	NA	ncRNA_exonic	ENSG00000232463	NA	NA	NA	Score=752;Name=lod=1518	NA	1q25.2	NA	NA	NA	NA	rs10798448	0.5	0.5	0.48	0.538738	0.5129	0.5476	0.5245	0.4773	0.6493	0.53	0.53	0.5	0.43	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.005522	NA	NA	NA	NA	NA	0.377	NA	4.4871
1203	10	101903412	101903412	T	C	intergenic	CPN1,ERLIN1	dist=61770;dist=6435	NA	NA	ncRNA_exonic	ENSG00000270623	NA	NA	NA	Score=577;Name=lod=294	NA	10q24.31	NA	NA	NA	NA	rs11190401	0.57	0.57	0.588	0.559105	0.5129	0.5188	0.5159	0.7761	0.3855	0.5	0.51	0.54	0.75	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.352865	NA	NA	NA	NA	NA	0.623	NA	4.4871
1203	12	16552279	16552279	T	C	intergenic	MGST1,LMO3	dist=22156;dist=149027	NA	NA	ncRNA_exonic	ENSG00000256238	NA	NA	NA	Score=587;Name=lod=324	NA	12p12.3	NA	NA	NA	NA	rs10772928	0.71	0.71	0.702	0.725439	0.5129	0.9623	0.7003	0.789	0.6319	0.5	0.96	0.67	0.76	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.119542	NA	NA	NA	NA	NA	0.717	NA	4.4871
1203	13	24697341	24697341	C	A	intergenic	ANKRD20A19P,SPATA13	dist=173887;dist=37520	NA	NA	ncRNA_exonic	ENSG00000225674	NA	NA	NA	Score=801;Name=lod=2409	NA	13q12.12	NA	NA	NA	NA	rs2077899	0.49	0.49	0.465	0.481629	0.5129	0.5446	0.5562	0.3056	0.5695	0.53	0.55	0.55	0.31	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.07614	NA	NA	NA	NA	NA	0.478	NA	4.4871
1203	14	103749368	103749368	T	C	intergenic	LINC00605,EIF5	dist=94003;dist=50971	NA	NA	ncRNA_exonic	ENSG00000240624	NA	NA	NA	Score=747;Name=lod=1442	NA	14q32.32	NA	NA	NA	NA	rs11160742	0.6	0.6	0.593	0.614816	0.5129	0.6518	0.6599	0.6581	0.591	0.52	0.67	0.61	0.65	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.436903	NA	NA	NA	NA	NA	0.529	NA	4.4871
1203	11	32874926	32874926	G	A	exonic	PRRG4	NA	synonymous SNV	PRRG4:NM_024081:exon6:c.G534A:p.P178P	exonic	ENSG00000135378	NA	synonymous SNV	ENSG00000135378:ENST00000257836:exon6:c.G534A:p.P178P	NA	NA	11p13	NA	NA	NA	NA	rs11032025	0.42	0.42	0.422	0.405351	0.3986	0.4127	0.4841	0.3464	0.4284	0.39	0.42	0.5	0.43	0.4	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.338412	NA	NA	0.381135	0.37307	ID=COSM1353552;OCCURENCE=1(large_intestine)	0.362	NA	4.4869316
1203	6	10514910	10514910	C	T	intergenic	MIR5689,GCNT2	dist=74883;dist=6658	NA	NA	ncRNA_exonic	ENSG00000216359	NA	NA	NA	Score=329;Name=lod=29	NA	6p24.3	NA	NA	NA	NA	rs510083	0.6	0.6	0.6	0.611821	0.5139	0.6528	0.5562	0.6172	0.7025	0.52	0.67	0.55	0.69	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.460589	NA	NA	NA	NA	NA	0.558	NA	4.4861
1203	9	124282531	124282531	G	A	intergenic	GGTA1P,DAB2IP	dist=20225;dist=46868	NA	NA	ncRNA_exonic	ENSG00000213467	NA	NA	NA	Score=740;Name=lod=1361	NA	9q33.2	NA	NA	NA	NA	rs4314715	0.57	0.57	0.52	0.583866	0.5139	0.6409	0.67	0.4803	0.6759	0.53	0.65	0.61	0.5	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.141426	NA	NA	NA	NA	NA	0.514	NA	4.4861
1203	9	124282587	124282587	G	A	intergenic	GGTA1P,DAB2IP	dist=20281;dist=46812	NA	NA	ncRNA_exonic	ENSG00000213467	NA	NA	NA	Score=740;Name=lod=1361	NA	9q33.2	NA	NA	NA	NA	rs4077202	0.57	0.57	0.522	0.584065	0.5139	0.6419	0.67	0.4803	0.6759	0.53	0.65	0.61	0.5	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.144181	NA	NA	NA	NA	NA	0.507	NA	4.4861
1203	9	124282651	124282651	G	A	intergenic	GGTA1P,DAB2IP	dist=20345;dist=46748	NA	NA	ncRNA_exonic	ENSG00000213467	NA	NA	NA	Score=740;Name=lod=1361	NA	9q33.2	NA	NA	NA	NA	rs4077201	0.57	0.57	0.538	0.584065	0.5139	0.6419	0.67	0.4803	0.6759	0.53	0.65	0.61	0.5	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.196534	NA	NA	NA	NA	NA	0.514	NA	4.4861
1203	10	57427557	57427557	T	C	intergenic	MTRNR2L5,ZWINT	dist=67070;dist=689642	NA	NA	ncRNA_exonic	ENSG00000236993	NA	NA	NA	Score=754;Name=lod=1551	NA	10q21.1	NA	NA	NA	NA	rs10825560	0.39	0.39	0.373	0.373203	0.5139	0.4137	0.3559	0.2443	0.3732	0.49	0.41	0.4	0.22	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.001921	NA	NA	NA	NA	NA	0.428	NA	4.4861
1203	22	31285680	31285680	G	A	intronic	OSBP2	NA	NA	NA	intronic	ENSG00000184792	NA	NA	NA	NA	NA	22q12.2	NA	Name=CEBPB	NA	NA	rs5749186	0.59	0.59	0.568	0.600839	0.5139	0.7609	0.4914	0.6256	0.5695	0.49	0.7	0.55	0.62	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.604418	NA	NA	NA	NA	NA	0.572	NA	4.4861
1203	3	125643970	125643970	T	C	ncRNA_intronic	FAM86JP	NA	NA	NA	ncRNA_intronic	ENSG00000171084	NA	NA	NA	NA	NA	3q21.2	NA	NA	NA	NA	rs12489324	0.16	0.16	0.11	0.166134	0.1809	0.1429	0.1427	0.1831	0.1687	0.17	0.11	0.17	0.19	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.402988	NA	NA	NA	NA	NA	NA	NA	4.4857666
1203	2	153004736	153004736	C	T	intronic	STAM2	NA	NA	NA	intronic	ENSG00000115145	NA	NA	NA	Score=407;Name=lod=60	NA	2q23.3	NA	NA	NA	NA	rs72864741	0.12	0.12	0.114	0.0988419	0.1809	0.0198	0.1556	0.1021	0.0511	0.18	0.03	0.18	0.09	0.143	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.122193	NA	NA	0.190509	0.112347	NA	0.21	NA	4.485591
1203	6	101337611	101337611	A	G	intergenic	ASCC3,GRIK2	dist=8387;dist=509250	NA	NA	ncRNA_exonic	ENSG00000270987	NA	NA	NA	Score=419;Name=lod=67	NA	6q16.3	NA	NA	NA	NA	rs9498419	0.56	0.56	0.529	0.519169	0.5149	0.75	0.6153	0.4168	0.3558	0.53	0.76	0.56	0.4	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.634581	NA	NA	NA	NA	NA	0.529	NA	4.4851
1203	7	44190468	44190468	T	G	intronic	GCK	NA	NA	NA	intronic	ENSG00000106633	NA	NA	NA	NA	NA	7p13	NA	Name=HA-E2F1	NA	NA	rs2268573	0.62	0.62	0.63	0.609026	0.5149	0.627	0.6182	0.7912	0.4346	0.5	0.64	0.59	0.8	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.838201	NA	NA	NA	NA	NA	0.63	NA	4.4851
1203	10	57427515	57427515	C	T	intergenic	MTRNR2L5,ZWINT	dist=67028;dist=689684	NA	NA	ncRNA_exonic	ENSG00000236993	NA	NA	NA	Score=754;Name=lod=1551	NA	10q21.1	NA	NA	NA	NA	rs10763222	0.42	0.42	0.427	0.409744	0.5149	0.4137	0.3602	0.3797	0.3732	0.49	0.41	0.41	0.34	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.124143	NA	NA	NA	NA	NA	0.471	NA	4.4851
1204	17	65110436	65110436	A	G	intronic	HELZ	NA	NA	NA	intronic	ENSG00000198265	NA	NA	NA	Score=414;Name=lod=64	NA	17q24.2	NA	NA	NA	NA	rs2302158	0.18	0.18	0.173	0.192292	0.1769	0.1984	0.1614	0.2352	0.1656	0.18	0.2	0.14	0.21	0.1755	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.135026	NA	NA	0.163121	0.227322	NA	0.188	NA	4.484479
1204	1	157043732	157043732	A	G	intergenic	ARHGEF11,ETV3L	dist=28570;dist=18103	NA	NA	ncRNA_exonic	ENSG00000224520	NA	NA	NA	Score=760;Name=lod=1633	NA	1q23.1	NA	NA	NA	NA	rs56389633	0.37	0.37	0.322	0.371805	0.5159	0.254	0.428	0.2572	0.4601	0.52	0.24	0.47	0.21	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.326003	NA	NA	NA	NA	NA	0.348	NA	4.4841
1204	2	220330724	220330724	C	T	intronic	SPEG	NA	NA	NA	intronic	ENSG00000072195	NA	NA	NA	Score=680;Name=lod=770	NA	2q35	NA	NA	NA	NA	rs1567488	0.44	0.44	0.38	0.419329	0.5159	0.6736	0.4856	0.0651	0.4898	0.5	0.66	0.48	0.08	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.941001	NA	NA	NA	NA	NA	0.29	NA	4.4841
1204	22	25083454	25083454	G	A	intergenic	POM121L10P,PIWIL3	dist=28340;dist=31547	NA	NA	ncRNA_exonic	ENSG00000224334	NA	NA	NA	Score=834;Name=lod=3271	NA	22q11.23	NA	NA	NA	NA	rs6004237	0.56	0.56	0.534	0.609225	0.5159	0.5466	0.6383	0.6225	0.7311	0.49	0.54	0.63	0.62	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.171402	NA	NA	NA	NA	NA	0.594	NA	4.4841
1204	2	36810586	36810586	T	C	exonic	FEZ2	NA	synonymous SNV	FEZ2:NM_001042548:exon3:c.A402G:p.T134T,FEZ2:NM_005102:exon3:c.A402G:p.T134T	exonic	ENSG00000171055	NA	synonymous SNV	ENSG00000171055:ENST00000357996:exon3:c.A99G:p.T33T,ENSG00000171055:ENST00000379245:exon3:c.A402G:p.T134T,ENSG00000171055:ENST00000405912:exon3:c.A402G:p.T134T,ENSG00000171055:ENST00000413938:exon3:c.A99G:p.T33T,ENSG00000171055:ENST00000451623:exon3:c.A402G:p.T134T	NA	NA	2p22.2	NA	NA	NA	NA	rs14291	0.43	0.43	0.403	0.428714	0.4115	0.4147	0.5144	0.4478	0.3742	0.41	0.39	0.49	0.46	0.4047	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.602454	NA	NA	0.366892	0.442517	NA	0.601	NA	4.4835746
1204	7	111970342	111970342	A	G	intronic	ZNF277	NA	NA	NA	exonic	ENSG00000198839	NA	synonymous SNV	ENSG00000198839:ENST00000450657:exon7:c.A872G:p.X291X	NA	NA	7q31.1	NA	NA	NA	NA	rs11773393	0.17	0.17	0.164	0.167332	0.1421	0.1419	0.1023	0.2617	0.138	0.14	0.14	0.09	0.29	0.2078	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.261988	NA	NA	NA	NA	NA	0.188	NA	4.4834333
1204	16	89620148	89620148	A	G	intronic	SPG7	NA	NA	NA	exonic	ENSG00000197912	NA	synonymous SNV	ENSG00000197912:ENST00000561911:exon5:c.A483G:p.A161A	NA	NA	16q24.3	NA	NA	NA	NA	rs730264	0.18	0.18	0.18	0.180312	0.169	0.1359	0.1254	0.2617	0.1667	0.17	0.13	0.13	0.27	0.1812	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.294301	NA	NA	NA	NA	NA	0.159	NA	4.4831333
1204	5	141304314	141304314	T	A	intronic	KIAA0141	NA	NA	NA	intronic	ENSG00000081791	NA	NA	NA	NA	NA	5q31.3	NA	Name=Pol2	NA	NA	rs6580206	0.66	0.66	0.656	0.715855	0.5169	0.7669	0.6744	0.8396	0.7301	0.5	0.81	0.63	0.77	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.875699	NA	NA	NA	NA	NA	0.507	NA	4.4831
1204	6	30576781	30576781	G	C	intronic	PPP1R10	NA	NA	NA	intronic	ENSG00000204569	NA	NA	NA	NA	NA	6p21.33	NA	Name=Pol2	NA	NA	rs1264419	0.59	0.59	0.63	0.667332	0.5169	0.5863	0.4928	0.8253	0.816	0.51	0.57	0.5	0.8	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.268141	NA	NA	NA	NA	NA	0.696	NA	4.4831
1204	22	25083697	25083697	G	A	intergenic	POM121L10P,PIWIL3	dist=28583;dist=31304	NA	NA	ncRNA_exonic	ENSG00000224334	NA	NA	NA	Score=834;Name=lod=3271	NA	22q11.23	NA	NA	NA	NA	rs4822531	0.56	0.56	0.607	0.67492	0.5169	0.5466	0.6585	0.8601	0.7311	0.44	0.52	0.6	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.126025	NA	NA	NA	NA	NA	0.732	NA	4.4831
1204	9	131771505	131771505	C	T	exonic	SH3GLB2	NA	synonymous SNV	SH3GLB2:NM_020145:exon10:c.G960A:p.P320P	exonic	ENSG00000148341	NA	synonymous SNV	ENSG00000148341:ENST00000416629:exon9:c.G897A:p.P299P,ENSG00000148341:ENST00000372559:exon10:c.G960A:p.P320P,ENSG00000148341:ENST00000372564:exon10:c.G960A:p.P320P,ENSG00000148341:ENST00000417224:exon11:c.G975A:p.P325P,ENSG00000148341:ENST00000372554:exon12:c.G987A:p.P329P	NA	NA	9q34.11	NA	NA	NA	NA	rs1129098	0.27	0.27	0.227	0.255791	0.4135	0.1696	0.3991	0.0885	0.3067	0.42	0.15	0.38	0.11	0.4119	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.025453	NA	NA	0.359022	0.116978	NA	0.319	NA	4.4822446
1204	6	24701860	24701860	C	G	UTR3	ACOT13	NM_018473:c.*17C>G,NM_001160094:c.*17C>G	NA	NA	ncRNA_exonic	ENSG00000272345	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs144752694	0.0023	0.0023	0	0.00139776	0.007	NA	NA	NA	NA	0.01	NA	NA	NA	0.0053	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.361227	1.361227	NA	0.00593	0.001135	NA	NA	NA	4.48177
1204	9	36303536	36303536	G	A	intergenic	GNE,RNF38	dist=26483;dist=32863	NA	NA	ncRNA_exonic	ENSG00000215283	NA	NA	NA	Score=516;Name=lod=166	NA	9p13.2	NA	NA	NA	NA	rs10972835	0.46	0.46	0.451	0.458267	0.5189	0.3968	0.3934	0.447	0.5204	0.52	0.35	0.42	0.5	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.12553	NA	NA	NA	NA	NA	0.384	NA	4.4811
1204	17	28728401	28728401	C	T	intronic	CPD	NA	NA	NA	intronic	ENSG00000108582	NA	NA	NA	NA	NA	17q11.2	NA	NA	Name=3	NA	rs7209857	0.64	0.64	0.67	0.68151	0.5189	0.8234	0.5331	0.8585	0.5685	0.51	0.75	0.51	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.054555	NA	NA	NA	NA	NA	0.543	NA	4.4811
1204	1	26650550	26650550	C	A	intronic	AIM1L	NA	NA	NA	intronic	ENSG00000176092	NA	NA	NA	NA	Name=Obesity-related traits	1p36.11	NA	NA	NA	NA	rs11247915	0.34	0.34	0.343	0.309904	0.5199	0.0724	0.2637	0.4024	0.2464	0.53	0.06	0.3	0.39	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.452743	1.452743	NA	NA	NA	NA	0.312	NA	4.4801
1204	10	111440605	111440605	A	G	intergenic	RNU6-53P,XPNPEP1	dist=441115;dist=183919	NA	NA	ncRNA_exonic	ENSG00000270294	NA	NA	NA	Score=634;Name=lod=505	NA	10q25.1	NA	NA	NA	NA	rs7898586	0.38	0.38	0.37	0.329073	0.5199	0.2411	0.3545	0.2859	0.2638	0.53	0.26	0.39	0.3	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.2438	4.2438	NA	NA	NA	NA	0.304	NA	4.4801
1204	10	111440719	111440719	T	A	intergenic	RNU6-53P,XPNPEP1	dist=441229;dist=183805	NA	NA	ncRNA_exonic	ENSG00000270294	NA	NA	NA	Score=634;Name=lod=505	NA	10q25.1	NA	NA	NA	NA	rs7915504	0.38	0.38	0.381	0.329273	0.5199	0.2411	0.3545	0.2867	0.2638	0.53	0.26	0.39	0.3	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.661785	4.661785	NA	NA	NA	NA	0.304	NA	4.4801
1204	11	4870139	4870139	G	A	exonic	OR51S1	NA	synonymous SNV	OR51S1:NM_001004758:exon1:c.C300T:p.V100V	exonic	ENSG00000176922	NA	synonymous SNV	ENSG00000176922:ENST00000322101:exon1:c.C300T:p.V100V	NA	NA	11p15.4	NA	NA	NA	NA	rs11602455	0.23	0.23	0.204	0.238618	0.4046	0.0675	0.2421	0.1203	0.4018	0.4	0.06	0.31	0.13	0.3527	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.137581	NA	NA	0.429269	0.170377	NA	0.225	NA	4.4800976
1204	22	26193982	26193982	C	G	exonic	MYO18B	NA	synonymous SNV	MYO18B:NM_032608:exon12:c.C2439G:p.L813L	exonic	ENSG00000133454	NA	synonymous SNV	ENSG00000133454:ENST00000335473:exon12:c.C2439G:p.L813L,ENSG00000133454:ENST00000407587:exon12:c.C2439G:p.L813L,ENSG00000133454:ENST00000536101:exon12:c.C2439G:p.L813L	Score=383;Name=lod=48	NA	22q12.1	NA	NA	NA	NA	rs738642	0.68	0.68	0.654	0.684305	0.7217	0.879	0.7363	0.3888	0.8078	0.72	0.9	0.7	0.37	0.7296	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.648719	NA	NA	0.735897	0.462755	NA	0.601	NA	4.4794696
1204	2	202633582	202633582	A	G	intronic	ALS2	NA	NA	NA	intronic	ENSG00000003393	NA	NA	NA	Score=502;Name=lod=146	NA	2q33.1	NA	NA	NA	NA	rs3219153	0.24	0.24	0.244	0.262181	0.1789	0.4008	0.1081	0.205	0.3916	0.2	0.4	0.1	0.23	0.199	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.095723	NA	NA	0.142962	0.179281	NA	0.225	NA	4.479138
1204	1	108299809	108299809	G	A	intronic	VAV3	NA	NA	NA	intronic	ENSG00000134215	NA	NA	NA	NA	NA	1p13.3	NA	Name=ERalpha_a	NA	NA	rs12138353	0.46	0.46	0.138	0.494609	0.5209	0.3641	0.5375	0.4826	0.5879	0.52	0.35	0.52	0.44	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.990298	NA	NA	NA	NA	NA	0.152	NA	4.4791
1204	22	25083170	25083170	G	A	intergenic	POM121L10P,PIWIL3	dist=28056;dist=31831	NA	NA	ncRNA_exonic	ENSG00000224334	NA	NA	NA	Score=834;Name=lod=3271	NA	22q11.23	NA	NA	NA	NA	rs5760581	0.52	0.52	0.487	0.550519	0.5209	0.4554	0.6455	0.5575	0.6022	0.49	0.44	0.62	0.57	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.064103	2.064103	NA	NA	NA	NA	0.565	NA	4.4791
1204	10	27540647	27540647	G	A	ncRNA_exonic	LRRC37A6P	NA	NA	NA	ncRNA_exonic	ENSG00000230445	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs12774718	0.16	0.16	0.135	0.137979	0.1879	0.0149	0.281	0.1846	0.0491	0.19	0.03	0.26	0.19	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.000695	NA	NA	NA	NA	NA	0.232	NA	4.4787666
1204	1	94471154	94471154	C	T	intronic	ABCA4	NA	NA	NA	intronic	ENSG00000198691	NA	NA	NA	NA	NA	1p22.1	NA	NA	NA	NA	rs4147863	0.16	0.16	0.151	0.140974	0.1789	0.121	0.1282	0.1536	0.1145	0.17	0.16	0.14	0.16	0.1595	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.318641	1.318641	NA	0.182907	0.155243	ID=COSN163159;OCCURENCE=1(breast)	0.145	CLINSIG=non-pathogenic;CLNDBN=not_provided;CLNREVSTAT=single;CLNACC=RCV000085783.2;CLNDSDB=.;CLNDSDBID=.	4.478693
1204	2	153733922	153733922	T	A	intergenic	ARL6IP6,RPRM	dist=116155;dist=599930	NA	NA	ncRNA_exonic	ENSG00000226213	NA	NA	NA	Score=682;Name=lod=787	NA	2q23.3	NA	NA	NA	NA	rs1427395	0.4	0.4	0.379	0.373802	0.5219	0.2679	0.3343	0.2927	0.4683	0.53	0.28	0.39	0.36	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.021225	NA	NA	NA	NA	NA	0.486	NA	4.4781
1204	6	29912473	29912473	T	C	intronic	HLA-A	NA	NA	NA	intronic	ENSG00000206503	NA	NA	NA	NA	NA	6p22.1	NA	Name=Pol2,Pol2-4H8	NA	NA	rs9260196	0.49	0.49	0.37	0.533147	0.5219	0.4871	0.5994	0.6029	0.4509	0.46	0.43	0.51	0.59	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.236809	NA	NA	NA	NA	NA	0.152	NA	4.4781
1204	6	29912477	29912477	A	G	intronic	HLA-A	NA	NA	NA	intronic	ENSG00000206503	NA	NA	NA	NA	NA	6p22.1	NA	Name=Pol2-4H8,Pol2	NA	NA	rs9260197	0.49	0.49	0.37	0.533347	0.5219	0.4871	0.5994	0.6029	0.4519	0.46	0.43	0.5	0.59	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.577122	NA	NA	NA	NA	NA	0.159	NA	4.4781
1204	7	30538651	30538651	T	C	intronic	GGCT	NA	NA	NA	intronic	ENSG00000006625	NA	NA	NA	NA	NA	7p14.3	NA	NA	NA	NA	rs38409	0.68	0.68	0.663	0.665535	0.7853	0.6964	0.7608	0.5159	0.6452	0.77	0.62	0.79	0.52	0.7366	0.79	.	.	0.007	B	0.003	B	.	.	1.000	P	.	.	.	.	-1.006	T	0.000	T	.	0.768	8.062	2.18	0.493	0.641	4.937	0.768332	NA	0.97	NA	NA	NA	0.587	NA	4.4781
1204	20	36959353	36959353	A	G	intronic	BPI	NA	NA	NA	intronic	ENSG00000101425	NA	NA	NA	NA	NA	20q11.23	NA	Name=SP1,HDAC2_(SC-6296)	NA	NA	rs5743534	0.41	0.41	0.411	0.442292	0.5219	0.253	0.5	0.4319	0.5286	0.52	0.19	0.46	0.44	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.1456	NA	NA	NA	NA	NA	0.406	NA	4.4781
1204	9	33245076	33245076	G	A	intronic	SPINK4	NA	NA	NA	intronic	ENSG00000122711	NA	NA	NA	NA	NA	9p13.3	Score=760;Name=V$PPARA_01	NA	NA	NA	rs480583	0.2	0.2	0.189	0.195687	0.1869	0.1627	0.1888	0.2405	0.183	0.18	0.17	0.23	0.23	0.1716	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.961289	NA	NA	0.164302	0.246255	NA	0.188	NA	4.477198
1204	11	46760756	46760756	G	A	intronic	F2	NA	NA	NA	intronic	ENSG00000180210	NA	NA	NA	NA	NA	11p11.2	NA	Name=Pol2	NA	NA	rs3136516	0.3	0.3	0.265	0.282947	0.5229	0.1796	0.4654	0.0234	0.364	0.51	0.19	0.44	0.03	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.243524	2.243524	NA	NA	NA	NA	0.442	NA	4.4771
1204	3	125644009	125644009	G	A	ncRNA_intronic	FAM86JP	NA	NA	NA	ncRNA_intronic	ENSG00000171084	NA	NA	NA	NA	NA	3q21.2	NA	NA	NA	NA	rs12485974	0.23	0.23	0.182	0.266573	0.1899	0.1062	0.17	0.5779	0.1585	0.17	0.1	0.18	0.51	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.629203	NA	NA	NA	NA	NA	0.014	NA	4.4767666
1204	12	13366599	13366599	C	T	intronic	EMP1	NA	NA	NA	intronic	ENSG00000134531	NA	NA	NA	NA	NA	12p13.1	NA	NA	Name=8	NA	rs2277395	0.12	0.12	0.101	0.100839	0.159	0.122	0.098	0.0053	0.1503	0.15	0.16	0.1	0.01	0.16	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.262799	NA	NA	0.204302	0.038584	NA	0.116	NA	4.476698
1204	19	14975040	14975040	G	A	intergenic	OR7A10,OR7A17	dist=22351;dist=16198	NA	NA	ncRNA_exonic	ENSG00000172148	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs10407682	0.34	0.34	0.389	0.342851	0.2505	0.3006	0.2392	0.6074	0.1973	0.26	0.29	0.23	0.57	0.273	0.57	0.07	T	.	.	.	.	0.301	U	0.998	P	.	.	.	.	-0.930	T	0.000	T	.	-1.223	0.061	1.19	0.165	-0.448	5.169	-1.222946	NA	0.1	NA	NA	NA	0.536	NA	4.4765
1204	11	66001418	66001418	C	T	intronic	PACS1	NA	NA	NA	intronic	ENSG00000175115	NA	NA	NA	NA	NA	11q13.2	NA	NA	NA	NA	rs2236651	0.2	0.2	0.194	0.211062	0.174	0.2887	0.1383	0.2375	0.1851	0.18	0.28	0.14	0.19	0.1792	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.821223	NA	NA	0.170664	0.221364	NA	0.232	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117886.2;CLNDSDB=.;CLNDSDBID=.	4.476136
1204	9	34918201	34918201	G	A	intergenic	FAM205B,KIAA1045	dist=79618;dist=39991	NA	NA	ncRNA_exonic	ENSG00000178723	NA	NA	NA	Score=592;Name=lod=339	NA	9p13.3	NA	NA	NA	NA	rs4879836	0.42	0.42	0.386	0.373003	0.5239	0.3462	0.4798	0.3048	0.2618	0.51	0.36	0.45	0.31	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.721298	NA	NA	NA	NA	NA	0.565	NA	4.4761
1204	10	91738556	91738556	C	A	intergenic	LINC00865,HTR7	dist=137938;dist=762020	NA	NA	ncRNA_exonic	ENSG00000228938	NA	NA	NA	Score=454;Name=lod=93	NA	10q23.31	NA	NA	NA	NA	rs10785923	0.67	0.67	0.628	0.702077	0.5239	0.9772	0.7003	0.528	0.8384	0.54	0.98	0.67	0.53	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.358445	NA	NA	NA	NA	NA	0.5	NA	4.4761
1204	12	4745313	4745313	C	T	intronic	AKAP3	NA	NA	NA	intronic	ENSG00000111254,ENSG00000139180	NA	NA	NA	Score=635;Name=lod=509	NA	12p13.32	NA	NA	NA	NA	rs2267546	0.42	0.42	0.382	0.388978	0.5239	0.369	0.5893	0.1876	0.4008	0.54	0.37	0.56	0.21	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.218282	NA	NA	NA	NA	NA	0.471	NA	4.4761
1204	17	40737043	40737043	G	C	intronic	FAM134C	NA	NA	NA	intronic	ENSG00000141699	NA	NA	NA	NA	NA	17q21.2	NA	NA	Name=5	NA	rs9889580	0.54	0.54	0.552	0.590855	0.5239	0.4692	0.5159	0.7156	0.6697	0.53	0.47	0.47	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.042841	NA	NA	NA	NA	NA	0.667	NA	4.4761
1204	4	69433714	69433714	C	T	exonic	UGT2B17	NA	synonymous SNV	UGT2B17:NM_001077:exon1:c.G489A:p.E163E	exonic	ENSG00000197888	NA	synonymous SNV	ENSG00000197888:ENST00000317746:exon1:c.G489A:p.E163E	NA	NA	4q13.2	NA	NA	NA	NA	rs34664906	0.3	0.3	0.3	0.282947	0.3549	0.0476	0.4798	0.3306	0.2474	0.36	0.16	0.46	0.28	0.4171	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.286259	NA	NA	0.418837	0.335246	NA	0.145	NA	4.4758296
1204	15	89391160	89391160	C	A	exonic	ACAN	NA	synonymous SNV	ACAN:NM_001135:exon9:c.C1623A:p.P541P,ACAN:NM_013227:exon9:c.C1623A:p.P541P	exonic	ENSG00000157766	NA	synonymous SNV	ENSG00000157766:ENST00000561243:exon8:c.C1623A:p.P541P,ENSG00000157766:ENST00000352105:exon9:c.C1623A:p.P541P,ENSG00000157766:ENST00000439576:exon9:c.C1623A:p.P541P,ENSG00000157766:ENST00000558207:exon9:c.C1623A:p.P541P,ENSG00000157766:ENST00000559004:exon9:c.C1623A:p.P541P	NA	NA	15q26.1	Score=836;Name=V$ARP1_01	NA	NA	NA	rs2272023	0.67	0.67	0.694	0.694289	0.7406	0.4802	0.6138	0.8918	0.6575	0.74	0.44	0.64	0.87	0.6958	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.931716	NA	NA	0.754945	0.8843	ID=COSM147968;OCCURENCE=1(stomach)	0.71	NA	4.4753216
1204	7	43484310	43484310	T	C	exonic	HECW1	NA	synonymous SNV	HECW1:NM_015052:exon11:c.T1539C:p.S513S	exonic	ENSG00000002746	NA	synonymous SNV	ENSG00000002746:ENST00000453890:exon10:c.T1539C:p.S513S,ENSG00000002746:ENST00000395891:exon11:c.T1539C:p.S513S	NA	NA	7p13	NA	NA	NA	NA	rs73098706	0.29	0.29	0.283	0.295128	0.4155	0.1508	0.2839	0.2307	0.4151	0.43	0.15	0.32	0.21	0.3879	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.671067	NA	NA	0.387994	0.244006	NA	0.377	NA	4.4752726
1204	11	110306727	110306727	G	T	intronic	FDX1	NA	NA	NA	intronic	ENSG00000137714	NA	NA	NA	NA	NA	11q22.3	NA	NA	Name=3	NA	rs4754453	0.12	0.12	0.099	0.10004	0.1978	0.0377	0.111	0.0998	0.0562	0.2	0.03	0.13	0.08	0.1453	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.471058	NA	NA	0.181638	0.10109	NA	0.13	NA	4.475262
1204	2	160708645	160708645	C	G	intronic	LY75,LY75-CD302	NA	NA	NA	intronic	ENSG00000054219,ENSG00000248672	NA	NA	NA	NA	NA	2q24.2	NA	NA	Name=2	NA	rs2162500	0.35	0.35	0.353	0.289936	0.5249	0.2907	0.3285	0.1626	0.1922	0.52	0.28	0.34	0.17	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.364826	NA	NA	NA	NA	NA	0.348	NA	4.4751
1205	2	12164246	12164246	C	T	intergenic	MIR4262,TRIB2	dist=187134;dist=692752	NA	NA	ncRNA_intronic	ENSG00000224184	NA	NA	NA	Score=679;Name=lod=768	NA	2p25.1	NA	NA	NA	NA	rs4669797	0.46	0.46	0.428	0.471845	0.5258	0.5972	0.4986	0.1392	0.7178	0.54	0.59	0.48	0.17	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.234982	NA	NA	NA	NA	NA	0.391	NA	4.4742
1205	9	34922856	34922856	A	G	intergenic	FAM205B,KIAA1045	dist=84273;dist=35336	NA	NA	ncRNA_exonic	ENSG00000215199	NA	NA	NA	Score=580;Name=lod=304	NA	9p13.3	NA	NA	NA	NA	rs10120934	0.42	0.42	0.389	0.383387	0.5258	0.3472	0.4827	0.3139	0.2975	0.51	0.36	0.45	0.33	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.726116	1.726116	NA	NA	NA	NA	0.572	NA	4.4742
1205	11	124386783	124386783	A	G	intergenic	OR8B8,OR8B12	dist=75802;dist=25835	NA	NA	ncRNA_exonic	ENSG00000254646	NA	NA	NA	Score=358;Name=lod=38	NA	11q24.2	NA	NA	NA	NA	rs7111616	0.69	0.69	0.676	0.708267	0.5258	0.7599	0.6945	0.9092	0.5808	0.52	0.75	0.67	0.89	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.625451	NA	NA	NA	NA	NA	0.667	NA	4.4742
1205	19	16100918	16100918	G	A	intergenic	OR10H4,LINC00661	dist=40150;dist=25526	NA	NA	ncRNA_intronic	ENSG00000267392	NA	NA	NA	NA	NA	19p13.12	NA	Name=NRSF	NA	NA	rs4808419	0.39	0.39	0.351	0.381789	0.5258	0.3125	0.5274	0.121	0.5542	0.52	0.34	0.56	0.14	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.180075	NA	NA	NA	NA	NA	0.348	NA	4.4742
1205	6	52658962	52658962	T	C	exonic	GSTA1	NA	synonymous SNV	GSTA1:NM_145740:exon5:c.A375G:p.K125K	exonic	ENSG00000243955	NA	synonymous SNV	ENSG00000243955:ENST00000334575:exon5:c.A375G:p.K125K	NA	NA	6p12.2	NA	NA	NA	NA	rs1051775	0.25	0.25	0.222	0.228035	0.4235	0.1369	0.2695	0.0424	0.3425	0.43	0.14	0.3	0.06	0.3437	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.310843	NA	NA	0.425349	0.108034	NA	0.239	NA	4.4741176
1205	3	52228150	52228150	A	T	intergenic	POC1A,ALAS1	dist=39444;dist=3949	NA	NA	ncRNA_exonic	ENSG00000242849	NA	NA	NA	Score=694;Name=lod=882	NA	3p21.2	NA	NA	NA	NA	rs411457	0.45	0.45	0.449	0.410743	0.5268	0.3919	0.4971	0.3018	0.3967	0.52	0.43	0.51	0.34	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.075088	NA	NA	NA	NA	NA	0.37	NA	4.4732
1205	5	53155688	53155688	C	T	intergenic	NDUFS4,ARL15	dist=176517;dist=24926	NA	NA	ncRNA_exonic	ENSG00000217791	NA	NA	NA	Score=641;Name=lod=538	NA	5q11.2	NA	NA	NA	NA	rs271253	0.44	0.44	0.387	0.430112	0.5268	0.2877	0.5677	0.3737	0.456	0.54	0.29	0.55	0.4	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.411263	1.411263	NA	NA	NA	NA	0.493	NA	4.4732
1205	5	126507584	126507584	G	A	intergenic	C5orf63,MEGF10	dist=98400;dist=118872	NA	NA	ncRNA_exonic	ENSG00000250080	NA	NA	NA	Score=762;Name=lod=1663	NA	5q23.2	NA	NA	NA	NA	rs248080	0.46	0.46	0.486	0.442492	0.5268	0.3571	0.3963	0.4849	0.4192	0.51	0.39	0.45	0.47	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.721693	1.721693	NA	NA	NA	NA	0.413	NA	4.4732
1205	5	150843996	150843996	T	C	intronic	SLC36A1	NA	NA	NA	intronic	ENSG00000123643	NA	NA	NA	NA	NA	5q33.1	NA	Name=eGFP-GATA2,GATA2_(CG2-96),GATA-1,TAL1_(SC-12984)	NA	NA	rs415426	0.57	0.57	0.576	0.60603	0.5268	0.6577	0.4222	0.649	0.7065	0.52	0.63	0.47	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.455473	NA	NA	NA	NA	NA	0.551	NA	4.4732
1205	9	15527569	15527569	G	A	intergenic	PSIP1,CCDC171	dist=16566;dist=25528	NA	NA	ncRNA_exonic	ENSG00000213362	NA	NA	NA	Score=762;Name=lod=1673	NA	9p22.3	NA	NA	NA	NA	rs28709032	0.54	0.54	0.532	0.523962	0.5268	0.4861	0.5836	0.6172	0.3916	0.54	0.51	0.57	0.57	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.204183	NA	NA	NA	NA	NA	0.536	NA	4.4732
1205	9	90432843	90432843	T	C	intergenic	CTSL3P,CTSL1P8	dist=31044;dist=26817	NA	NA	ncRNA_exonic	ENSG00000232743	NA	NA	NA	Score=412;Name=lod=63	NA	9q22.1	NA	NA	NA	NA	rs7857111	0.43	0.43	0.423	0.398163	0.5268	0.2639	0.415	0.4682	0.2975	0.52	0.24	0.45	0.49	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.091282	NA	NA	NA	NA	NA	0.348	NA	4.4732
1205	21	47532544	47532544	C	T	intronic	COL6A2	NA	NA	NA	intronic	ENSG00000142173	NA	NA	NA	NA	NA	21q22.3	Score=825;Name=V$EGR2_01	NA	NA	NA	rs1010688	0.42	0.42	0.386	0.373802	0.5268	0.4018	0.6282	0.1301	0.3364	0.54	0.38	0.6	0.14	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.167409	NA	NA	NA	NA	NA	0.326	NA	4.4732
1205	17	15905190	15905190	A	G	intronic	TTC19	NA	NA	NA	intronic	ENSG00000011295	NA	NA	NA	NA	NA	17p12	NA	Name=SETDB1	Name=22	NA	rs3760298	0.36	0.36	0.342	0.346645	0.5298	0.1538	0.4438	0.2973	0.3548	0.52	0.14	0.45	0.32	0.4612	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.378853	1.378853	NA	0.53593	0.325919	NA	0.341	NA	4.47307
1205	22	23980968	23980968	T	A	ncRNA_exonic	GUSBP11	NA	NA	NA	ncRNA_exonic	ENSG00000211683,ENSG00000228315,ENSG00000234353	NA	NA	NA	NA	NA	22q11.23	NA	NA	NA	NA	rs13056126	0.23	0.23	0.223	0.228435	0.1938	0.3363	0.1772	0.1838	0.2495	0.22	0.33	0.18	0.17	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.883223	NA	NA	NA	NA	NA	0.188	NA	4.4728666
1205	22	23995561	23995561	T	C	ncRNA_intronic	GUSBP11	NA	NA	NA	ncRNA_intronic	ENSG00000228315	NA	NA	NA	NA	NA	22q11.23	NA	NA	NA	NA	rs8136455	0.33	0.33	0.332	0.346046	0.1938	0.3353	0.2061	0.6067	0.2607	0.21	0.34	0.21	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.310881	NA	NA	NA	NA	NA	0.384	NA	4.4728666
1205	14	93170741	93170741	T	C	intronic	LGMN	NA	NA	NA	intronic	ENSG00000100600	NA	NA	NA	NA	NA	14q32.12	NA	Name=Max,NFKB,PAX5-C20	Name=16	NA	rs2250672	0.56	0.56	0.552	0.562101	0.507	0.4563	0.6715	0.7156	0.4427	0.51	0.47	0.63	0.71	0.5217	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.174532	NA	NA	0.498721	0.684521	NA	0.493	NA	4.472579
1205	1	79215225	79215225	G	A	intergenic	IFI44,ELTD1	dist=85462;dist=140224	NA	NA	ncRNA_exonic	ENSG00000235400	NA	NA	NA	Score=405;Name=lod=59	NA	1p31.1	NA	NA	NA	NA	rs1625911	0.67	0.67	0.659	0.663738	0.5278	0.7599	0.7349	0.6959	0.6104	0.54	0.81	0.7	0.7	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.203266	NA	NA	NA	NA	NA	0.63	NA	4.4722
1205	3	195723586	195723586	G	A	intergenic	SDHAP1,TFRC	dist=6436;dist=52569	NA	NA	upstream	ENSG00000231464	NA	NA	NA	Score=738;Name=lod=1327	NA	3q29	NA	NA	NA	NA	rs56022806	0.04	0.04	NA	0.0179712	0.0278	0.0079	0.0144	0.0008	0.044	0.08	0.01	0.08	0.0041	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.030405	NA	NA	NA	NA	NA	NA	NA	4.4722
1205	6	85448103	85448103	C	T	intronic	TBX18	NA	NA	NA	intronic	ENSG00000112837	NA	NA	NA	NA	NA	6q14.3	NA	Name=JunD	NA	NA	rs761391	0.41	0.41	0.38	0.40635	0.5278	0.3234	0.5288	0.2277	0.5215	0.54	0.31	0.49	0.25	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.696187	NA	NA	NA	NA	NA	0.406	NA	4.4722
1205	19	46026970	46026970	T	A	intronic	VASP	NA	NA	NA	intronic	ENSG00000125753	NA	NA	NA	NA	NA	19q13.32	NA	Name=BCLAF1_(M33-P5B11),IRF4_(M-17),PU.1,CTCF,ELF1_(SC-631),Pol2-4H8,Egr-1,BCL3,NFKB	NA	NA	rs11880111	0.26	0.26	0.248	0.285942	0.1431	0.3651	0.2997	0.3177	0.2986	0.16	0.34	0.24	0.35	0.218	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.002626	NA	NA	0.166977	0.294371	NA	0.225	NA	4.471923
1205	17	4608275	4608275	A	G	upstream	PELP1	NA	NA	NA	ncRNA_exonic	ENSG00000213939	NA	NA	NA	Score=715;Name=lod=1070	NA	17p13.2	NA	NA	NA	NA	rs2174831	0.68	0.68	0.647	0.679712	0.6948	0.8284	0.7219	0.4274	0.8221	0.72	0.85	0.72	0.4	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.103016	NA	NA	NA	NA	NA	0.551	NA	4.4718666
1205	22	23994781	23994781	A	G	ncRNA_intronic	GUSBP11	NA	NA	NA	ncRNA_intronic	ENSG00000228315,ENSG00000244723	NA	NA	NA	NA	NA	22q11.23	NA	NA	NA	NA	rs9624263	0.38	0.38	0.405	0.40595	0.1948	0.38	0.2233	0.7474	0.318	0.21	0.37	0.23	0.75	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.20053	NA	NA	NA	NA	NA	0.413	NA	4.4718666
1205	2	101042122	101042122	T	G	intergenic	CHST10,NMS	dist=7992;dist=44822	NA	NA	ncRNA_exonic	ENSG00000238029	NA	NA	NA	Score=845;Name=lod=3610	NA	2q11.2	NA	NA	NA	NA	rs7590388	0.62	0.62	0.612	0.634185	0.5288	0.7639	0.5879	0.73	0.5123	0.52	0.75	0.56	0.69	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.094245	NA	NA	NA	NA	NA	0.623	NA	4.4712
1205	2	233310149	233310149	A	G	intergenic	ALPPL2,ALPI	dist=34725;dist=10684	NA	NA	ncRNA_exonic	ENSG00000223788	NA	NA	NA	Score=537;Name=lod=203	NA	2q37.1	NA	NA	NA	NA	rs790044	0.57	0.57	0.544	0.602835	0.5288	0.631	0.5922	0.5794	0.6892	0.54	0.63	0.55	0.54	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.201352	NA	NA	NA	NA	NA	0.471	NA	4.4712
1205	4	2822289	2822289	C	A	intronic	SH3BP2	NA	NA	NA	intronic	ENSG00000087266	NA	NA	NA	NA	NA	4p16.3	NA	Name=Pol2	NA	NA	rs2239727	0.52	0.52	0.5	0.539137	0.5288	0.4712	0.5735	0.5492	0.5818	0.52	0.45	0.58	0.54	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.482228	NA	NA	NA	NA	NA	0.478	NA	4.4712
1205	5	126515540	126515540	A	G	intergenic	C5orf63,MEGF10	dist=106356;dist=110916	NA	NA	ncRNA_exonic	ENSG00000250956	NA	NA	NA	Score=581;Name=lod=306	NA	5q23.2	NA	NA	NA	NA	rs116724	0.5	0.5	0.525	0.486222	0.5288	0.3562	0.4121	0.6415	0.4192	0.51	0.39	0.47	0.63	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.373849	NA	NA	NA	NA	NA	0.457	NA	4.4712
1205	11	125851300	125851300	T	C	intronic	CDON	NA	NA	NA	intronic	ENSG00000064309	NA	NA	NA	Score=340;Name=lod=32	NA	11q24.2	NA	NA	NA	NA	rs624070	0.53	0.53	0.546	0.527756	0.5288	0.373	0.4625	0.6914	0.5112	0.54	0.41	0.49	0.68	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.490869	NA	NA	NA	NA	NA	0.493	NA	4.4712
1205	15	78189075	78189075	G	A	intergenic	LOC253044,LOC645752	dist=247494;dist=17484	NA	NA	ncRNA_exonic	ENSG00000260139	NA	NA	NA	NA	NA	15q24.3	Score=804;Name=V$GFI1_01	NA	NA	NA	rs4569232	0.45	0.45	0.473	0.435104	0.5288	0.5337	0.3501	0.3048	0.4734	0.54	0.53	0.38	0.28	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.546638	NA	NA	NA	NA	NA	0.29	NA	4.4712
1205	15	91428197	91428197	T	C	intronic	FES	NA	NA	NA	intronic	ENSG00000182511	NA	NA	NA	NA	NA	15q26.1	NA	NA	Name=9	NA	rs2071382	0.64	0.64	0.61	0.640575	0.5288	0.8105	0.7392	0.5651	0.6125	0.52	0.83	0.72	0.54	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.978763	NA	NA	NA	NA	NA	0.478	NA	4.4712
1205	4	2826400	2826400	T	C	exonic	SH3BP2	NA	synonymous SNV	SH3BP2:NM_001122681:exon4:c.T300C:p.H100H,SH3BP2:NM_001145855:exon4:c.T384C:p.H128H,SH3BP2:NM_001145856:exon4:c.T471C:p.H157H,SH3BP2:NM_003023:exon4:c.T300C:p.H100H	exonic	ENSG00000087266	NA	synonymous SNV	ENSG00000087266:ENST00000356331:exon4:c.T300C:p.H100H,ENSG00000087266:ENST00000435136:exon4:c.T300C:p.H100H,ENSG00000087266:ENST00000442312:exon4:c.T384C:p.H128H,ENSG00000087266:ENST00000452765:exon4:c.T300C:p.H100H,ENSG00000087266:ENST00000503393:exon4:c.T471C:p.H157H,ENSG00000087266:ENST00000504294:exon4:c.T300C:p.H100H,ENSG00000087266:ENST00000508385:exon4:c.T300C:p.H100H,ENSG00000087266:ENST00000511747:exon4:c.T300C:p.H100H,ENSG00000087266:ENST00000512014:exon4:c.T300C:p.H100H,ENSG00000087266:ENST00000513095:exon4:c.T300C:p.H100H,ENSG00000087266:ENST00000502260:exon5:c.T300C:p.H100H,ENSG00000087266:ENST00000503219:exon5:c.T300C:p.H100H	Score=504;Name=lod=149	NA	4p16.3	NA	NA	NA	NA	rs3213501	0.74	0.74	0.76	0.78754	0.7197	0.5546	0.8271	0.9871	0.7996	0.72	0.53	0.79	0.98	0.7538	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.482899	1.482899	NA	0.722674	0.942578	NA	0.754	NA	4.4704926
1205	2	103028041	103028041	G	T	intergenic	IL18R1,IL18RAP	dist=12824;dist=7213	NA	NA	ncRNA_exonic	ENSG00000236785	NA	NA	NA	Score=709;Name=lod=1011	NA	2q12.1	NA	NA	NA	NA	rs7559566	NA	NA	NA	0.433906	0.5298	0.1687	0.3401	0.7474	0.2515	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.166752	NA	NA	NA	NA	NA	NA	NA	4.4702
1205	19	55142101	55142101	G	A	intronic	LILRB1	NA	NA	NA	UTR5	ENSG00000104972	ENST00000427581:c.-316G>A	NA	NA	NA	NA	19q13.42	NA	Name=Pol2-4H8	NA	NA	rs3760861	0.47	0.47	0.452	0.45028	0.3022	0.5982	0.4841	0.5537	0.2863	0.3	0.59	0.45	0.59	0.3946	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.991219	NA	NA	NA	NA	NA	0.493	NA	4.4698667
1205	3	36779707	36779707	G	A	exonic	DCLK3	NA	synonymous SNV	DCLK3:NM_033403:exon2:c.C444T:p.L148L	exonic	ENSG00000163673	NA	synonymous SNV	ENSG00000163673:ENST00000416516:exon2:c.C444T:p.L148L	NA	NA	3p22.2	NA	NA	NA	NA	rs3796187	0.28	0.28	0.238	0.246006	0.4076	0.1687	0.3847	0.0681	0.3016	0.44	0.17	0.38	0.1	0.3578	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.210796	NA	NA	0.43156	0.135156	ID=COSM149353;OCCURENCE=1(stomach)	0.304	NA	4.4697066
1205	3	12112010	12112010	G	A	intronic	SYN2	NA	NA	NA	ncRNA_exonic	ENSG00000226642	NA	NA	NA	Score=858;Name=lod=4087	NA	3p25.2	NA	NA	NA	NA	rs598747	0.81	0.81	0.803	0.821286	0.8638	0.8145	0.8977	0.6884	0.91	0.86	0.78	0.89	0.72	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.631703	NA	NA	NA	NA	NA	0.804	NA	4.4695333
1205	6	42210951	42210951	C	G	intronic	TRERF1	NA	NA	NA	intronic	ENSG00000124496	NA	NA	NA	NA	NA	6p21.1	NA	NA	Name=18	NA	rs2295276	0.25	0.25	0.256	0.248602	0.175	0.1429	0.1441	0.5726	0.0695	0.17	0.15	0.15	0.56	0.1835	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.354364	NA	NA	0.172093	0.467771	NA	0.297	NA	4.469407
1205	7	61822104	61822104	G	A	intergenic	NONE,ZNF733P	dist=NONE;dist=929566	NA	NA	ncRNA_exonic	ENSG00000233918	NA	NA	NA	Score=627;Name=lod=470	NA	7q11.21	NA	NA	NA	NA	rs12531338	NA	NA	0.288	0.476238	0.5308	0.2937	0.6571	0.4592	0.5031	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.014157	NA	NA	NA	NA	NA	NA	NA	4.4692
1205	9	71722764	71722764	A	T	intergenic	FXN,TJP2	dist=7670;dist=13416	NA	NA	downstream	ENSG00000270236	NA	NA	NA	Score=587;Name=lod=323	NA	9q21.11	NA	NA	NA	NA	rs117269462	0.01	0.01	0.006	0.00938498	0.0308	NA	0.0187	0.0015	0.001	0.02	NA	0.02	0.002	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.467671	1.467671	NA	NA	NA	NA	0.007	NA	4.4692
1205	12	53295917	53295917	A	G	intronic	KRT8	NA	NA	NA	intronic	ENSG00000170421	NA	NA	NA	NA	NA	12q13.13	NA	Name=Pol2-4H8	NA	NA	rs2035875	0.54	0.54	0.533	0.566893	0.5308	0.6042	0.6167	0.3979	0.7587	0.51	0.64	0.57	0.46	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.096284	NA	NA	NA	NA	NA	0.399	NA	4.4692
1205	19	18368988	18368988	G	A	intronic	KIAA1683	NA	NA	NA	intronic	ENSG00000130518	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs999815	0.2	0.2	0.193	0.167332	0.2704	0.2381	0.2017	0.0204	0.1626	0.29	0.23	0.19	0.04	0.2607	0.29	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.987	T	0.000	T	.	-0.463	1.858	-1.18	-0.366	-0.600	6.279	-0.463252	NA	0.01	NA	NA	NA	0.196	NA	4.4689
1205	22	23982775	23982775	C	T	ncRNA_intronic	GUSBP11	NA	NA	NA	ncRNA_exonic	ENSG00000234353	NA	NA	NA	NA	NA	22q11.23	NA	NA	NA	NA	rs12627958	0.22	0.22	0.185	0.213858	0.1978	0.3234	0.1744	0.1422	0.2423	0.22	0.32	0.17	0.13	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.79709	NA	NA	NA	NA	NA	0.225	NA	4.4688666
1205	5	176011889	176011889	G	A	exonic	CDHR2	NA	synonymous SNV	CDHR2:NM_001171976:exon19:c.G2607A:p.A869A,CDHR2:NM_017675:exon19:c.G2607A:p.A869A	exonic	ENSG00000074276	NA	synonymous SNV	ENSG00000074276:ENST00000506348:exon18:c.G2607A:p.A869A,ENSG00000074276:ENST00000261944:exon19:c.G2607A:p.A869A,ENSG00000074276:ENST00000510636:exon19:c.G2607A:p.A869A	NA	NA	5q35.2	NA	NA	NA	NA	rs4868660	0.24	0.24	0.229	0.204273	0.4145	0.0278	0.402	0.1021	0.1677	0.41	0.02	0.41	0.13	0.356	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.181054	NA	NA	0.427326	0.160463	NA	0.246	NA	4.4688406
1205	1	50865316	50865316	C	A	intergenic	ELAVL4,DMRTA2	dist=197776;dist=17907	NA	NA	ncRNA_intronic	ENSG00000229316	NA	NA	NA	Score=606;Name=lod=388	NA	1p32.3	NA	NA	NA	NA	rs2653872	0.6	0.6	0.585	0.577276	0.5318	0.8393	0.6599	0.3411	0.6145	0.55	0.83	0.6	0.38	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.609305	NA	NA	NA	NA	NA	0.543	NA	4.4682
1205	1	50871167	50871167	C	T	intergenic	ELAVL4,DMRTA2	dist=203627;dist=12056	NA	NA	ncRNA_exonic	ENSG00000225671	NA	NA	NA	Score=736;Name=lod=1301	NA	1p32.3	NA	NA	NA	NA	rs2484678	0.6	0.6	0.572	0.577276	0.5318	0.8393	0.6599	0.3411	0.6145	0.56	0.84	0.62	0.38	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.723004	NA	NA	NA	NA	NA	0.543	NA	4.4682
1205	2	128699833	128699833	C	T	intronic	SAP130	NA	NA	NA	intronic	ENSG00000136715	NA	NA	NA	NA	NA	2q14.3	NA	Name=CEBPB	NA	NA	rs1370229	0.41	0.41	0.363	0.331869	0.5318	0.5	0.4755	0.0318	0.2566	0.55	0.5	0.46	0.05	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.463397	NA	NA	NA	NA	NA	0.275	NA	4.4682
1205	2	130253977	130253977	T	G	intergenic	HS6ST1,LOC389033	dist=1177806;dist=426458	NA	NA	ncRNA_exonic	ENSG00000233428	NA	NA	NA	Score=553;Name=lod=236	NA	2q21.1	NA	NA	NA	NA	rs34242261	0.36	0.36	0.322	0.335264	0.5318	0.374	0.3732	0.0915	0.3957	0.52	0.35	0.38	0.11	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.002711	NA	NA	NA	NA	NA	0.399	NA	4.4682
1205	12	53295079	53295079	G	A	intronic	KRT8	NA	NA	NA	intronic	ENSG00000170421	NA	NA	NA	NA	NA	12q13.13	NA	Name=Pol2	NA	NA	rs4403881	0.54	0.54	0.52	0.567492	0.5318	0.6042	0.6167	0.3986	0.7597	0.51	0.64	0.57	0.46	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.099626	NA	NA	NA	NA	NA	NA	NA	4.4682
1205	12	53295081	53295081	T	G	intronic	KRT8	NA	NA	NA	intronic	ENSG00000170421	NA	NA	NA	NA	NA	12q13.13	NA	Name=Pol2	NA	NA	rs4531558	0.54	0.54	0.509	0.567292	0.5318	0.6042	0.6167	0.3986	0.7587	0.51	0.64	0.57	0.46	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.450745	NA	NA	NA	NA	NA	NA	NA	4.4682
1205	12	53295109	53295109	G	C	intronic	KRT8	NA	NA	NA	intronic	ENSG00000170421	NA	NA	NA	NA	NA	12q13.13	NA	Name=Pol2	NA	NA	rs4479068	0.54	0.54	0.522	0.567292	0.5318	0.6042	0.6167	0.3986	0.7587	0.51	0.64	0.57	0.46	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.394842	NA	NA	NA	NA	NA	0.297	NA	4.4682
1205	13	19526947	19526947	T	C	intergenic	ANKRD20A9P,LINC00442	dist=80838;dist=55452	NA	NA	ncRNA_exonic	ENSG00000226057	NA	NA	NA	Score=636;Name=lod=512	NA	13q12.11	NA	NA	NA	NA	rs13378194	0.33	0.33	0.308	0.338458	0.5318	0.1984	0.2896	0.1498	0.5736	0.54	0.18	0.35	0.17	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.109206	NA	NA	NA	NA	NA	0.42	NA	4.4682
1205	16	5133606	5133606	G	T	intronic	ALG1	NA	NA	NA	intronic	ENSG00000033011	NA	NA	NA	NA	NA	16p13.3	NA	NA	Name=2	NA	rs8056523	0.53	0.53	0.507	0.558506	0.5318	0.631	0.4352	0.4781	0.7076	0.53	0.62	0.42	0.5	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.143232	NA	NA	NA	NA	NA	0.42	NA	4.4682
1205	6	24701941	24701941	A	G	UTR3	ACOT13	NM_018473:c.*98A>G,NM_001160094:c.*98A>G	NA	NA	ncRNA_exonic	ENSG00000272345	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs62400786	0.02	0.02	0.011	0.0151757	0.0318	0.001	0.0202	0.003	0.0256	0.03	0.0017	0.03	0.0041	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.389182	NA	NA	NA	NA	NA	0.014	NA	4.4682
1205	22	50688348	50688348	A	G	exonic	HDAC10	NA	synonymous SNV	HDAC10:NM_001159286:exon5:c.T435C:p.C145C,HDAC10:NM_032019:exon5:c.T435C:p.C145C	exonic	ENSG00000100429	NA	synonymous SNV	ENSG00000100429:ENST00000216271:exon5:c.T435C:p.C145C,ENSG00000100429:ENST00000349505:exon5:c.T435C:p.C145C,ENSG00000100429:ENST00000448072:exon5:c.T435C:p.C145C,ENSG00000100429:ENST00000454936:exon5:c.T435C:p.C145C	NA	NA	22q13.33	Score=882;Name=V$GR_Q6	NA	NA	NA	rs1555048	0.82	0.82	0.826	0.871406	0.7078	0.8671	0.83	0.9871	0.9172	0.71	0.86	0.8	0.97	0.7847	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.425918	NA	NA	0.705978	0.940254	NA	0.855	NA	4.4681886
1205	19	56369215	56369215	C	T	exonic	NLRP4	NA	synonymous SNV	NLRP4:NM_134444:exon3:c.C456T:p.I152I	exonic	ENSG00000160505	NA	synonymous SNV	ENSG00000160505:ENST00000587891:exon1:c.C231T:p.I77I,ENSG00000160505:ENST00000301295:exon3:c.C456T:p.I152I,ENSG00000160505:ENST00000346986:exon3:c.C456T:p.I152I,ENSG00000160505:ENST00000587464:exon3:c.C456T:p.I152I	NA	NA	19q13.43	NA	NA	NA	NA	rs395503	0.48	0.48	0.456	0.515974	0.3827	0.6657	0.464	0.447	0.6288	0.39	0.66	0.49	0.39	0.4462	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.421616	NA	NA	0.369767	0.432365	NA	0.435	NA	4.4679996
1205	17	44360760	44360760	C	T	intergenic	KANSL1,LRRC37A	dist=58020;dist=11737	NA	NA	intronic	ENSG00000228696	NA	NA	NA	Score=584;Name=lod=315	NA	17q21.31	NA	NA	NA	NA	rs111362882	0.09	0.09	0.057	0.0726837	0.1988	0.001	0.1412	0.0113	0.0511	0.17	0.0017	0.15	0.02	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.532863	NA	0.42	NA	NA	NA	0.014	NA	4.4678667
1205	1	9324670	9324670	A	G	exonic	H6PD	NA	synonymous SNV	H6PD:NM_004285:exon5:c.A2118G:p.S706S	exonic	ENSG00000049239	NA	synonymous SNV	ENSG00000049239:ENST00000377403:exon5:c.A2118G:p.S706S,ENSG00000049239:ENST00000602477:exon5:c.A2151G:p.S717S	NA	NA	1p36.22	NA	NA	NA	NA	rs9434743	0.35	0.35	0.325	0.402157	0.4016	0.1538	0.428	0.5106	0.4939	0.43	0.13	0.43	0.45	0.4093	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.466386	NA	NA	0.387997	0.493872	NA	0.435	NA	4.4677696
1205	13	75814285	75814285	T	C	ncRNA_exonic	CTAGE11P	NA	NA	NA	ncRNA_exonic	ENSG00000214249	NA	NA	NA	NA	NA	13q22.2	NA	NA	NA	NA	rs2876702	0.1	0.1	0.083	0.0876597	0.1014	0.0675	0.0994	0.1029	0.0654	0.1	0.09	0.12	0.1	0.098	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.125694	NA	NA	NA	NA	NA	0.051	NA	4.4672666
1205	3	59996969	59996969	C	T	intronic	FHIT	NA	NA	NA	intronic	ENSG00000189283	NA	NA	NA	NA	NA	3p14.2	Score=721;Name=V$PPARG_02	NA	NA	NA	rs4679627	0.47	0.47	0.494	0.465655	0.5328	0.4554	0.3833	0.4486	0.4888	0.54	0.42	0.41	0.46	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.55009	3.55009	NA	NA	NA	NA	0.42	NA	4.4672
1205	15	57848201	57848201	T	G	intergenic	CGNL1,GCOM1	dist=5276;dist=35901	NA	NA	ncRNA_exonic	ENSG00000240874	NA	NA	NA	Score=709;Name=lod=1017	NA	15q21.3	NA	NA	NA	NA	rs7183861	0.45	0.45	0.425	0.430711	0.5328	0.4921	0.451	0.2451	0.499	0.54	0.5	0.46	0.23	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.093868	NA	NA	NA	NA	NA	0.471	NA	4.4672
1205	4	153889265	153889265	A	G	intronic	FHDC1	NA	NA	NA	intronic	ENSG00000137460	NA	NA	NA	NA	NA	4q31.3	NA	NA	Name=2	NA	rs6535885	0.14	0.14	0.152	0.137979	0.1849	0.0853	0.1268	0.2073	0.0583	0.15	0.1	0.14	0.17	0.1581	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.035784	NA	NA	0.19	0.205175	NA	0.167	NA	4.467
1205	4	154709480	154709480	G	A	intronic	SFRP2	NA	NA	NA	intronic	ENSG00000145423	NA	NA	NA	Score=676;Name=lod=747	NA	4q31.3	NA	NA	Name=5	NA	rs3810765	0.52	0.52	0.5	0.548722	0.4891	0.4157	0.6268	0.6059	0.6145	0.5	0.43	0.59	0.62	0.5274	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.479157	NA	NA	0.517093	0.579891	NA	0.565	NA	4.466407
1205	22	51017514	51017514	C	G	ncRNA_exonic	CHKB-CPT1B	NA	NA	NA	UTR5;UTR3	ENSG00000205560;ENSG00000100288,ENSG00000254413	ENST00000434492:c.-2798G>C;ENST00000406938:c.*96G>C;ENST00000453634:c.*96G>C	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs17001634	0.06	0.06	0.048	0.0690895	0.0338	0.1022	0.098	0.0083	0.1329	0.04	0.13	0.05	0.01	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.521109	2.521109	NA	NA	NA	NA	0.065	NA	4.4662
1205	8	62491943	62491943	G	A	intronic	ASPH	NA	NA	NA	ncRNA_exonic	ENSG00000254285	NA	NA	NA	Score=634;Name=lod=501	NA	8q12.3	NA	NA	NA	NA	rs3802285	0.75	0.75	0.83	0.81889	0.8678	0.6974	0.8429	0.9319	0.7239	0.77	0.65	0.82	0.79	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.812327	1.812327	NA	NA	NA	NA	0.87	NA	4.4655333
1205	12	7649653	7649653	T	C	exonic	CD163	NA	synonymous SNV	CD163:NM_004244:exon5:c.A855G:p.G285G,CD163:NM_203416:exon5:c.A855G:p.G285G	exonic	ENSG00000177575	NA	synonymous SNV	ENSG00000177575:ENST00000359156:exon5:c.A855G:p.G285G,ENSG00000177575:ENST00000396620:exon5:c.A855G:p.G285G,ENSG00000177575:ENST00000432237:exon5:c.A855G:p.G285G,ENSG00000177575:ENST00000541972:exon5:c.A819G:p.G273G	Score=483;Name=lod=122	NA	12p13.31	NA	NA	NA	NA	rs4883264	0.52	0.52	0.452	0.48123	0.7694	0.3839	0.7233	0.1241	0.5961	0.76	0.39	0.72	0.13	0.6705	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.190485	NA	NA	0.761279	0.22424	NA	0.507	NA	4.4654876
1206	19	9020154	9020154	A	G	exonic	MUC16	NA	synonymous SNV	MUC16:NM_024690:exon21:c.T37341C:p.S12447S	exonic	ENSG00000181143	NA	synonymous SNV	ENSG00000181143:ENST00000397910:exon21:c.T37341C:p.S12447S	NA	NA	19p13.2	NA	NA	NA	NA	rs11882881	0.42	0.42	0.397	0.446486	0.3966	0.4623	0.5418	0.4138	0.4581	0.37	0.4	0.53	0.46	0.4251	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.145471	NA	NA	0.380179	0.38552	NA	0.312	NA	4.4647876
1206	5	79655782	79655782	A	G	intergenic	CRSP8P,ZFYVE16	dist=7997;dist=48056	NA	NA	ncRNA_exonic	ENSG00000220157	NA	NA	NA	Score=615;Name=lod=421	NA	5q14.1	NA	NA	NA	NA	rs11948979	0.74	0.74	0.752	0.770767	0.5358	0.9405	0.6167	0.9145	0.7526	0.54	0.95	0.61	0.9	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.663191	NA	NA	NA	NA	NA	0.652	NA	4.4642
1206	9	21695893	21695893	A	G	intergenic	MIR31HG,MTAP	dist=136196;dist=106742	NA	NA	ncRNA_exonic	ENSG00000229835	NA	NA	NA	Score=676;Name=lod=742	NA	9p21.3	NA	NA	NA	NA	rs12380505	0.62	0.62	0.624	0.616613	0.5358	0.6915	0.4366	0.8585	0.4233	0.53	0.66	0.43	0.86	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.123778	NA	NA	NA	NA	NA	0.681	NA	4.4642
1206	16	16291420	16291420	G	A	intronic	ABCC6	NA	NA	NA	intronic	ENSG00000091262	NA	NA	NA	NA	NA	16p13.11	NA	NA	Name=2	NA	rs12929319	0.44	0.44	0.384	0.459465	0.5358	0.5367	0.6138	0.0946	0.6851	0.55	0.49	0.58	0.09	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.02538	NA	NA	NA	NA	NA	0.37	NA	4.4642
1206	19	14739549	14739549	C	A	intronic	EMR3	NA	NA	NA	intronic	ENSG00000131355	NA	NA	NA	Score=676;Name=lod=745	NA	19p13.12	NA	NA	NA	NA	rs10402165	0.45	0.45	0.444	0.406749	0.5358	0.1885	0.4654	0.5287	0.2924	0.55	0.2	0.51	0.54	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.785654	NA	NA	NA	NA	NA	0.464	NA	4.4642
1206	8	135614705	135614705	A	G	exonic	ZFAT	NA	synonymous SNV	ZFAT:NM_001174157:exon5:c.T1071C:p.R357R,ZFAT:NM_001167583:exon6:c.T1221C:p.R407R,ZFAT:NM_001174158:exon6:c.T1221C:p.R407R,ZFAT:NM_020863:exon6:c.T1257C:p.R419R,ZFAT:NM_001029939:exon7:c.T1221C:p.R407R	exonic	ENSG00000066827	NA	synonymous SNV	ENSG00000066827:ENST00000523399:exon5:c.T1071C:p.R357R,ENSG00000066827:ENST00000377838:exon6:c.T1257C:p.R419R,ENSG00000066827:ENST00000429442:exon6:c.T1221C:p.R407R,ENSG00000066827:ENST00000520214:exon6:c.T1221C:p.R407R,ENSG00000066827:ENST00000520356:exon6:c.T1221C:p.R407R,ENSG00000066827:ENST00000523243:exon6:c.T1257C:p.R419R,ENSG00000066827:ENST00000520727:exon7:c.T1221C:p.R407R	NA	NA	8q24.22	Score=795;Name=V$PAX5_02	NA	NA	NA	rs3739423	0.8	0.8	0.776	0.796326	0.7177	0.9028	0.8213	0.7814	0.7699	0.73	0.92	0.79	0.78	0.7616	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.102054	NA	NA	0.723235	0.792352	ID=COSM1455037,COSM1455036;OCCURENCE=1(large_intestine)	0.819	NA	4.4641316
1206	11	48285856	48285856	C	T	exonic	OR4X1	NA	synonymous SNV	OR4X1:NM_001004726:exon1:c.C444T:p.G148G	exonic	ENSG00000176567	NA	synonymous SNV	ENSG00000176567:ENST00000320048:exon1:c.C444T:p.G148G	NA	NA	11p11.2	Score=736;Name=V$PAX4_04	NA	NA	NA	rs10838850	0.66	0.66	0.638	0.603834	0.7445	0.5476	0.7406	0.5446	0.5	0.75	0.6	0.74	0.53	0.7035	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.540679	NA	NA	0.754537	0.566106	NA	0.616	NA	4.4641296
1206	9	130075672	130075672	C	T	intronic	GARNL3	NA	NA	NA	intronic	ENSG00000136895	NA	NA	NA	NA	NA	9q33.3	NA	Name=NF-YB	Name=2	NA	rs2779714	0.42	0.42	0.378	0.361621	0.5497	0.2103	0.6455	0.2171	0.318	0.56	0.25	0.62	0.24	0.4676	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.013139	2.013139	NA	0.518837	0.260781	NA	0.399	NA	4.463863
1206	1	231254003	231254003	G	A	intergenic	FAM89A,TRIM67	dist=78008;dist=44671	NA	NA	ncRNA_exonic	ENSG00000229595	NA	NA	NA	Score=527;Name=lod=185	NA	1q42.2	NA	NA	NA	NA	rs10864669	0.58	0.58	0.566	0.585264	0.5368	0.6667	0.5432	0.5121	0.68	0.52	0.72	0.54	0.52	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.109788	NA	NA	NA	NA	NA	0.58	NA	4.4632
1206	7	34791335	34791335	G	A	ncRNA_intronic	NPSR1-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000230356	NA	NA	NA	NA	NA	7p14.3	NA	NA	NA	NA	rs28716279	0.18	0.18	0.167	0.151358	0.2038	0.3274	0.1484	0.0166	0.1002	0.21	0.33	0.14	0.01	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.163725	NA	NA	NA	NA	NA	0.145	NA	4.4628666
1206	3	116745838	116745838	A	G	intergenic	LSAMP-AS3,IGSF11	dist=309951;dist=1873641	NA	NA	ncRNA_exonic	ENSG00000243014	NA	NA	NA	Score=694;Name=lod=882	NA	3q13.31	NA	NA	NA	NA	rs10154829	0.57	0.57	0.524	0.53115	0.5378	0.6657	0.4669	0.5408	0.4182	0.55	0.67	0.49	0.54	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.314263	NA	NA	NA	NA	NA	0.486	NA	4.4622
1206	8	95986972	95986972	G	C	intergenic	TP53INP1,NDUFAF6	dist=25357;dist=50242	NA	NA	ncRNA_exonic	ENSG00000253528	NA	NA	NA	Score=689;Name=lod=842	NA	8q22.1	NA	NA	NA	NA	rs10099059	0.53	0.53	0.491	0.513578	0.5378	0.7302	0.5548	0.2579	0.5818	0.55	0.69	0.59	0.25	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.450579	NA	NA	NA	NA	NA	0.442	NA	4.4622
1206	8	95987008	95987008	C	T	intergenic	TP53INP1,NDUFAF6	dist=25393;dist=50206	NA	NA	ncRNA_exonic	ENSG00000253528	NA	NA	NA	Score=689;Name=lod=842	NA	8q22.1	NA	NA	NA	NA	rs10099941	0.53	0.53	0.491	0.513379	0.5378	0.7302	0.5548	0.2572	0.5818	0.55	0.69	0.59	0.25	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.370214	NA	NA	NA	NA	NA	0.449	NA	4.4622
1206	10	120632048	120632048	A	G	intergenic	CACUL1,NANOS1	dist=117290;dist=157180	NA	NA	ncRNA_exonic	ENSG00000236058	NA	NA	NA	Score=781;Name=lod=1981	NA	10q26.11	NA	NA	NA	NA	rs9787461	0.55	0.55	0.516	0.530551	0.5378	0.5833	0.5836	0.4463	0.545	0.54	0.62	0.59	0.46	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.15637	NA	NA	NA	NA	NA	0.536	NA	4.4622
1206	17	28408070	28408070	C	T	intronic	EFCAB5	NA	NA	NA	intronic	ENSG00000176927	NA	NA	NA	Score=243;Name=lod=13	NA	17q11.2	NA	NA	NA	NA	rs11080115	0.45	0.45	0.447	0.45647	0.5378	0.2867	0.4323	0.559	0.4264	0.52	0.29	0.45	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.878036	1.878036	NA	NA	NA	NA	0.341	NA	4.4622
1206	3	10268017	10268017	C	T	intronic	IRAK2	NA	NA	NA	intronic	ENSG00000134070	NA	NA	NA	NA	NA	3p25.3	NA	Name=Pol2	NA	NA	rs779905	0.33	0.33	0.318	0.365016	0.1481	0.622	0.2738	0.3381	0.4243	0.14	0.6	0.25	0.36	0.2532	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.250096	NA	NA	0.136723	0.305039	NA	0.246	NA	4.461977
1206	13	32527529	32527529	A	G	ncRNA_intronic	EEF1DP3	NA	NA	NA	ncRNA_exonic	ENSG00000229715	NA	NA	NA	NA	NA	13q13.1	NA	NA	NA	NA	rs916756	0.38	0.38	0.396	0.411342	0.2048	0.5427	0.1614	0.6286	0.3722	0.22	0.51	0.16	0.66	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.467944	NA	NA	NA	NA	NA	0.341	NA	4.4618666
1206	1	207262980	207262980	T	G	intronic	C4BPB	NA	NA	NA	intronic	ENSG00000123843	NA	NA	NA	NA	NA	1q32.2	NA	Name=HNF4G_(SC-6558),HEY1,TCF12	Name=12	NA	rs12711513	0.62	0.62	0.592	0.61242	0.4831	0.8373	0.6398	0.5189	0.6207	0.49	0.88	0.6	0.52	0.5639	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.751019	NA	NA	0.491395	0.517703	NA	0.543	NA	4.461605
1206	2	171070810	171070810	G	T	intronic	MYO3B	NA	NA	NA	intronic	ENSG00000071909	NA	NA	NA	NA	NA	2q31.1	NA	Name=YY1_(C-20)	NA	NA	rs67994603	0.55	0.55	0.542	0.546526	0.5388	0.5466	0.6297	0.5106	0.544	0.54	0.54	0.56	0.55	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.314905	NA	NA	NA	NA	NA	0.645	NA	4.4612
1206	3	22423998	22423998	C	T	intergenic	ZNF385D,UBE2E2	dist=631182;dist=820786	NA	NA	ncRNA_exonic	ENSG00000132967	NA	NA	NA	Score=769;Name=lod=1787	NA	3p24.3	NA	NA	NA	NA	rs13070522	0.47	0.47	0.404	0.472244	0.5388	0.4296	0.6354	0.2799	0.592	0.55	0.47	0.59	0.25	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.657872	1.657872	NA	NA	NA	NA	0.406	NA	4.4612
1206	10	45430462	45430462	C	T	exonic	TMEM72	NA	synonymous SNV	TMEM72:NM_001123376:exon5:c.C708T:p.A236A	exonic	ENSG00000187783	NA	synonymous SNV	ENSG00000187783:ENST00000544540:exon4:c.C354T:p.A118A,ENSG00000187783:ENST00000389583:exon5:c.C708T:p.A236A	NA	NA	10q11.21	NA	NA	NA	NA	rs17417442	0.36	0.36	0.335	0.333466	0.3986	0.3274	0.4438	0.3086	0.228	0.39	0.29	0.43	0.32	0.3861	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.06438	NA	NA	0.421413	0.331633	NA	0.362	NA	4.4605536
1206	7	42958847	42958847	G	A	intronic	PSMA2	NA	NA	NA	ncRNA_exonic	ENSG00000234983	NA	NA	NA	Score=622;Name=lod=451	NA	7p14.1	NA	NA	NA	NA	rs652130	0.86	0.86	0.86	0.850639	0.8728	0.9097	0.7666	0.7814	0.9202	0.88	0.91	0.82	0.79	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.469106	NA	NA	NA	NA	NA	0.891	NA	4.4605333
1206	7	42959220	42959220	T	C	intronic	PSMA2	NA	NA	NA	ncRNA_exonic	ENSG00000234983	NA	NA	NA	Score=665;Name=lod=673	NA	7p14.1	NA	NA	NA	NA	rs653881	0.86	0.86	0.843	0.851837	0.8728	0.9097	0.768	0.7852	0.9202	0.88	0.91	0.82	0.79	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.142864	NA	NA	NA	NA	NA	0.891	NA	4.4605333
1206	20	51870849	51870849	T	C	exonic	TSHZ2	NA	synonymous SNV	TSHZ2:NM_001193421:exon2:c.T843C:p.F281F,TSHZ2:NM_173485:exon2:c.T852C:p.F284F	exonic	ENSG00000182463	NA	synonymous SNV	ENSG00000182463:ENST00000329613:exon2:c.T843C:p.F281F,ENSG00000182463:ENST00000371497:exon2:c.T852C:p.F284F,ENSG00000182463:ENST00000603338:exon2:c.T843C:p.F281F	Score=716;Name=lod=1086	NA	20q13.2	NA	NA	NA	NA	rs739870	0.8	0.8	0.804	0.834465	0.7237	0.7837	0.8256	0.975	0.817	0.72	0.79	0.8	0.95	0.7674	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.672475	NA	NA	0.715349	0.935315	NA	0.891	NA	4.4602176
1206	12	70088132	70088132	C	T	intronic	BEST3	NA	NA	NA	intronic	ENSG00000127325	NA	NA	NA	Score=722;Name=lod=1150	NA	12q15	NA	NA	NA	NA	rs1158868	0.2	0.2	0.218	0.197883	0.1869	0.0139	0.1614	0.4788	0.045	0.19	0.02	0.19	0.44	0.1699	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.733052	3.733052	NA	0.183949	0.380268	ID=COSN164304;OCCURENCE=1(NS)	0.203	NA	4.459251
1206	22	32756899	32756899	T	C	ncRNA_UTR3	RFPL3	NA	NA	NA	UTR3	ENSG00000128276	ENST00000397468:c.*80T>C,ENST00000249007:c.*80T>C,ENST00000382088:c.*80T>C	NA	NA	NA	NA	22q12.3	NA	NA	NA	NA	rs5749409	0.16	0.16	0.141	0.145767	0.0408	0.4583	0.0908	0.0303	0.1268	0.04	0.45	0.1	0.02	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.899776	NA	NA	NA	NA	NA	0.087	NA	4.4592
1206	22	45937149	45937149	C	T	exonic	FBLN1	NA	synonymous SNV	FBLN1:NM_001996:exon9:c.C963T:p.I321I,FBLN1:NM_006485:exon9:c.C963T:p.I321I,FBLN1:NM_006486:exon9:c.C963T:p.I321I,FBLN1:NM_006487:exon9:c.C963T:p.I321I	exonic	ENSG00000077942	NA	synonymous SNV	ENSG00000077942:ENST00000262722:exon9:c.C963T:p.I321I,ENSG00000077942:ENST00000327858:exon9:c.C963T:p.I321I,ENSG00000077942:ENST00000340923:exon9:c.C963T:p.I321I,ENSG00000077942:ENST00000348697:exon9:c.C963T:p.I321I,ENSG00000077942:ENST00000442170:exon9:c.C963T:p.I321I,ENSG00000077942:ENST00000402984:exon10:c.C1077T:p.I359I	NA	NA	22q13.31	NA	NA	NA	NA	rs9682	0.29	0.29	0.322	0.262181	0.4294	0.1825	0.2637	0.2171	0.2321	0.43	0.17	0.3	0.21	0.3594	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.82046	NA	NA	0.418721	0.247617	NA	0.355	NA	4.4591456
1206	8	20792070	20792070	G	C	intergenic	LZTS1-AS1,LOC286114	dist=644101;dist=39427	NA	NA	ncRNA_exonic	ENSG00000253866	NA	NA	NA	Score=497;Name=lod=140	NA	8p21.3	NA	NA	NA	NA	rs11776249	0.53	0.53	0.557	0.579673	0.5417	0.2371	0.5951	0.8306	0.6217	0.55	0.22	0.57	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.244149	NA	NA	NA	NA	NA	0.601	NA	4.4583
1206	1	7907971	7907971	C	A	intronic	UTS2	NA	NA	NA	intronic	ENSG00000049247	NA	NA	NA	NA	NA	1p36.23	NA	NA	Name=78	NA	rs707473	0.26	0.26	0.237	0.253994	0.1759	0.372	0.1499	0.2708	0.2638	0.17	0.42	0.18	0.29	0.2168	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.815642	NA	NA	0.149186	0.230822	ID=COSN162921;OCCURENCE=1(breast)	0.275	NA	4.458114
1206	10	73570334	73570334	G	A	intronic	CDH23	NA	NA	NA	intronic	ENSG00000107736	NA	NA	NA	NA	NA	10q22.1	NA	NA	NA	NA	rs11818398	0.16	0.16	0.142	0.148562	0.1938	0.2431	0.1441	0.059	0.1288	0.19	0.22	0.12	0.08	0.1686	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.611635	NA	NA	0.179891	0.085533	NA	0.152	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000039304.1|RCV000124209.1;CLNDSDB=.|.;CLNDSDBID=.|.	4.457709
1206	16	72108474	72108474	G	A	intronic	HPR	NA	NA	NA	intronic	ENSG00000140830,ENSG00000261701	NA	NA	NA	NA	NA	16q22.2	NA	Name=JunD	NA	NA	rs2070939	NA	NA	0.539	0.592652	0.5427	0.381	0.4164	0.8313	0.6646	NA	NA	NA	NA	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.871773	NA	NA	NA	NA	NA	0.623	NA	4.4573
1206	7	76255061	76255061	T	C	ncRNA_intronic	LOC100133091	NA	NA	NA	ncRNA_intronic	ENSG00000205485	NA	NA	NA	NA	NA	7q11.23	NA	NA	NA	NA	rs41278779	0.12	0.12	0.088	0.198482	0.2097	0.2272	0.2637	0.0794	0.272	0.13	0.13	0.19	0.04	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.759367	NA	NA	NA	NA	NA	0.109	NA	4.4569666
1206	4	104061266	104061266	G	A	intronic	CENPE	NA	NA	NA	intronic	ENSG00000138778	NA	NA	NA	NA	NA	4q24	NA	NA	Name=6	NA	rs7686105	0.14	0.14	0.131	0.169928	0.1779	0.1548	0.1916	0.0461	0.3292	0.17	0.14	0.19	0.05	0.1875	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.963976	1.963976	NA	0.178397	0.063383	NA	0.239	NA	4.456203
1206	1	94473864	94473864	C	T	intronic	ABCA4	NA	NA	NA	intronic	ENSG00000198691	NA	NA	NA	NA	NA	1p22.1	NA	NA	NA	NA	rs1800739	0.2	0.2	0.181	0.183307	0.1829	0.121	0.1801	0.2837	0.1145	0.17	0.16	0.19	0.27	0.1766	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.126488	NA	NA	0.184535	0.25488	ID=COSN163160;OCCURENCE=1(breast)	0.174	CLINSIG=non-pathogenic;CLNDBN=not_provided;CLNREVSTAT=single;CLNACC=RCV000085763.2;CLNDSDB=.;CLNDSDBID=.	4.455965
1206	19	36605794	36605794	C	T	UTR5	POLR2I	NM_006233:c.-36G>A	NA	NA	UTR5	ENSG00000105258	ENST00000221859:c.-36G>A,ENST00000592962:c.-36G>A,ENST00000586439:c.-36G>A	NA	NA	NA	NA	19q13.12	NA	Name=YY1_(C-20),USF1_(SC-8983),E2F6,NRSF,SP1,Mxi1_(bHLH),Pol2,Pol2(phosphoS2),E2F4,HMGN3,USF2,E2F6_(H-50),ETS1,TAF1,Znf143_(16618-1-AP),GTF2F1_(RAP-74),BHLHE40,p300,GR,Max,ELF1_(SC-631),Sin3Ak-20,HA-E2F1,Pol2-4H8,YY1,TBP,IRF1,TCF12,USF-1,Nrf1,PAX5-C20,SIX5,c-Myc,CCNT2,HEY1,BCL3	Name=133	NA	rs2231568	0.72	0.72	0.725	0.717452	0.6223	0.7907	0.7349	0.7821	0.6401	0.63	0.8	0.69	0.8	0.65	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.731508	NA	NA	0.605098	0.755232	NA	0.572	NA	4.4559354
1206	3	49758764	49758764	A	G	UTR3	RNF123	NM_022064:c.*26A>G	NA	NA	UTR5;UTR3	ENSG00000176020;ENSG00000164068,ENSG00000173540	ENST00000535833:c.-1866T>C;ENST00000327697:c.*26A>G,ENST00000457726:c.*2045A>G,ENST00000433785:c.*26A>G;ENST00000480687:c.*421T>C,ENST00000308375:c.*421T>C	NA	NA	NA	NA	3p21.31	NA	Name=Pol2(phosphoS2)	NA	NA	rs4768	0.22	0.22	0.24	0.240016	0.3091	0.1538	0.2032	0.2133	0.32	0.3	0.17	0.19	0.17	0.2681	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.790775	NA	NA	0.300698	0.211303	NA	0.181	NA	4.4554354
1206	3	49336232	49336232	T	C	intronic	USP4	NA	NA	NA	intronic	ENSG00000114316	NA	NA	NA	NA	NA	3p21.31	NA	Name=c-Jun,HDAC2_(SC-6296),FOXA1_(C-20),FOSL2,JunD,FOXA2_(SC-6554),FOXA1_(SC-101058)	NA	NA	rs11720964	0.62	0.62	0.575	0.621006	0.5447	0.9325	0.6427	0.3162	0.7751	0.54	0.92	0.63	0.36	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.096037	NA	NA	NA	NA	NA	0.5	NA	4.4553
1206	6	42924193	42924193	C	T	intergenic	CNPY3,GNMT	dist=17185;dist=4307	NA	NA	ncRNA_exonic	ENSG00000181524	NA	NA	NA	Score=720;Name=lod=1123	NA	6p21.1	NA	NA	NA	NA	rs13215983	0.48	0.48	0.487	0.494209	0.5447	0.1696	0.428	0.7632	0.4601	0.55	0.19	0.43	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.871717	NA	NA	NA	NA	NA	0.587	NA	4.4553
1207	6	144872051	144872051	C	A	intronic	UTRN	NA	NA	NA	intronic	ENSG00000152818	NA	NA	NA	NA	NA	6q24.2	NA	Name=CTCF	NA	NA	rs1005974	0.23	0.23	0.217	0.253594	0.16	0.1964	0.2882	0.3631	0.2362	0.16	0.2	0.25	0.37	0.2095	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.024739	NA	NA	0.175506	0.348842	NA	0.355	NA	4.454994
1207	10	105805497	105805497	C	T	intronic	COL17A1	NA	NA	NA	intronic	ENSG00000065618	NA	NA	NA	NA	NA	10q25.1	NA	Name=CTCF_(SC-5916),CTCF,Rad21,SMC3_(ab9263)	Name=119	NA	rs813944	0.48	0.48	0.44	0.436102	0.5209	0.6528	0.438	0.1823	0.4673	0.52	0.67	0.47	0.19	0.4945	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.414377	NA	NA	0.53	0.241943	NA	0.464	NA	4.4546
1207	22	31663842	31663842	C	G	exonic	LIMK2	NA	synonymous SNV	LIMK2:NM_001031801:exon9:c.C1146G:p.L382L,LIMK2:NM_016733:exon9:c.C1146G:p.L382L,LIMK2:NM_005569:exon10:c.C1209G:p.L403L	exonic	ENSG00000182541	NA	synonymous SNV	ENSG00000182541:ENST00000444929:exon5:c.C471G:p.L157L,ENSG00000182541:ENST00000333611:exon9:c.C1146G:p.L382L,ENSG00000182541:ENST00000340552:exon9:c.C1146G:p.L382L,ENSG00000182541:ENST00000406516:exon9:c.C975G:p.L325L,ENSG00000182541:ENST00000331728:exon10:c.C1209G:p.L403L	Score=537;Name=lod=203	NA	22q12.2	NA	NA	NA	NA	rs2228619	0.82	0.82	0.845	0.845048	0.7266	0.876	0.7478	0.9856	0.8139	0.71	0.87	0.76	0.98	0.7607	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.956027	NA	NA	0.724767	0.945302	NA	0.833	NA	4.4545996
1207	2	60962833	60962833	G	A	intergenic	BCL11A,PAPOLG	dist=182200;dist=20532	NA	NA	ncRNA_exonic	ENSG00000271707	NA	NA	NA	NA	NA	2p16.1	NA	Name=CtBP2,Egr-1	NA	NA	rs34405203	0.39	0.39	0.381	0.357029	0.5457	0.1448	0.3977	0.3956	0.3006	0.53	0.15	0.47	0.4	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.215559	NA	NA	NA	NA	NA	0.471	NA	4.4543
1207	6	150364128	150364128	G	A	intergenic	RAET1L,ULBP3	dist=17460;dist=21615	NA	NA	ncRNA_exonic	ENSG00000213091	NA	NA	NA	Score=786;Name=lod=2095	NA	6q25.1	NA	NA	NA	NA	rs3903885	0.41	0.41	0.413	0.393171	0.5457	0.3294	0.3746	0.3169	0.4182	0.55	0.3	0.43	0.32	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.07004	NA	NA	NA	NA	NA	0.42	NA	4.4543
1207	2	131051475	131051475	T	G	intergenic	TUBA3E,CCDC115	dist=95441;dist=44341	NA	NA	ncRNA_exonic	ENSG00000226915	NA	NA	NA	Score=682;Name=lod=785	NA	2q21.1	NA	NA	NA	NA	rs938867	0.56	0.56	0.513	0.564297	0.5467	0.4524	0.6614	0.652	0.5102	0.52	0.47	0.65	0.64	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.429335	NA	NA	NA	NA	NA	0.616	NA	4.4533
1207	3	97916387	97916387	T	C	intergenic	OR5H15,OR5H6	dist=27902;dist=66742	NA	NA	ncRNA_exonic	ENSG00000249321	NA	NA	NA	Score=309;Name=lod=24	NA	3q11.2	NA	NA	NA	NA	rs6768197	0.58	0.58	0.57	0.591054	0.5467	0.494	0.5029	0.7693	0.5583	0.55	0.56	0.48	0.73	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.441036	NA	NA	NA	NA	NA	0.486	NA	4.4533
1207	17	46977125	46977125	G	A	intergenic	ATP5G1,UBE2Z	dist=3893;dist=8606	NA	NA	ncRNA_intronic	ENSG00000248278	NA	NA	NA	NA	NA	17q21.32	NA	NA	Name=5	NA	rs2112617	0.47	0.47	0.455	0.421725	0.5467	0.6845	0.451	0.0635	0.4857	0.57	0.71	0.44	0.07	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.653194	NA	NA	NA	NA	NA	0.355	NA	4.4533
1207	19	45868006	45868006	A	T	intronic	ERCC2	NA	NA	NA	intronic	ENSG00000104884	NA	NA	NA	NA	NA	19q13.32	NA	Name=AP-2gamma	NA	NA	rs238405	0.62	0.62	0.654	0.634984	0.5467	0.4901	0.4841	0.9342	0.5777	0.56	0.52	0.49	0.92	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.313394	NA	NA	NA	NA	NA	0.739	NA	4.4533
1207	22	18111431	18111431	T	C	UTR5	ATP6V1E1	NM_001039367:c.-30A>G,NM_001039366:c.-30A>G,NM_001696:c.-30A>G	NA	NA	UTR5	ENSG00000131100	ENST00000253413:c.-30A>G,ENST00000399796:c.-30A>G,ENST00000399798:c.-30A>G,ENST00000413576:c.-9197A>G	NA	NA	NA	NA	22q11.21	NA	Name=USF1_(SC-8983),Pol2(phosphoS2),Pol2,PU.1,SP1,GABP,TAF1,ELF1_(SC-631),Max,Pol2-4H8,HA-E2F1,Sin3Ak-20,ELK4,Pol2(b),IRF1,TBP,USF-1,Nrf1,HEY1	NA	NA	rs7751	0.33	0.33	0.343	0.342851	0.2565	0.2123	0.2781	0.6868	0.1472	0.26	0.21	0.28	0.64	0.3085	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.573495	1.573495	NA	0.315349	0.635497	NA	0.457	NA	4.4529844
1207	9	136522187	136522187	A	G	intronic	DBH	NA	NA	NA	ncRNA_intronic	ENSG00000225756	NA	NA	NA	NA	NA	9q34.2	NA	NA	Name=4	NA	rs1611131	0.31	0.31	0.255	0.240415	0.326	0.4028	0.3329	0.1067	0.1002	0.34	0.43	0.33	0.12	0.2734	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.687695	NA	NA	0.281628	0.137994	NA	0.217	NA	4.4523053
1207	3	145542203	145542203	G	A	intergenic	C3orf58,PLOD2	dist=1830993;dist=245025	NA	NA	ncRNA_exonic	ENSG00000239797	NA	NA	NA	Score=738;Name=lod=1328	NA	3q24	NA	NA	NA	NA	rs9877492	0.51	0.51	0.389	0.480631	0.5477	0.7044	0.5663	0.2489	0.4335	0.53	0.69	0.55	0.22	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.641247	NA	NA	NA	NA	NA	NA	NA	4.4523
1207	3	145542204	145542204	C	T	intergenic	C3orf58,PLOD2	dist=1830994;dist=245024	NA	NA	ncRNA_exonic	ENSG00000239797	NA	NA	NA	Score=738;Name=lod=1328	NA	3q24	NA	NA	NA	NA	rs9877227	0.51	0.51	0.385	0.480631	0.5477	0.7044	0.5663	0.2489	0.4335	0.53	0.69	0.55	0.22	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.346904	NA	NA	NA	NA	NA	NA	NA	4.4523
1207	17	4540277	4540277	C	T	intronic	ALOX15	NA	NA	NA	intronic	ENSG00000161905	NA	NA	NA	NA	NA	17p13.2	NA	NA	Name=4	NA	rs2619118	0.43	0.43	0.406	0.424121	0.5477	0.4563	0.4222	0.2103	0.5542	0.55	0.48	0.44	0.19	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.391951	NA	NA	NA	NA	NA	0.507	NA	4.4523
1207	18	8413804	8413804	G	A	intergenic	PTPRM,RAB12	dist=6945;dist=195639	NA	NA	ncRNA_exonic	ENSG00000266613	NA	NA	NA	Score=813;Name=lod=2697	NA	18p11.23	NA	NA	NA	NA	rs640709	0.47	0.47	0.45	0.430511	0.5477	0.4435	0.4524	0.3442	0.3978	0.55	0.44	0.48	0.37	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.15393	NA	NA	NA	NA	NA	0.551	NA	4.4523
1207	15	85402431	85402431	G	A	intronic	ALPK3	NA	NA	NA	intronic	ENSG00000136383	NA	NA	NA	NA	NA	15q25.3	NA	Name=Pol2,GATA3_(SC-268),p300,HA-E2F1	NA	NA	rs2289141	0.25	0.25	0.236	0.291933	0.167	0.3829	0.268	0.2723	0.3701	0.16	0.36	0.26	0.27	0.2243	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.556745	1.556745	NA	0.156548	0.262369	NA	0.283	NA	4.452152
1207	6	71010101	71010101	A	G	intronic	COL9A1	NA	NA	NA	intronic	ENSG00000112280	NA	NA	NA	NA	NA	6q13	Score=819;Name=V$IRF1_01	NA	NA	NA	rs12210123	0.15	0.15	0.15	0.153554	0.1819	0.002	0.1239	0.2738	0.1391	0.19	NA	0.14	0.26	0.1744	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.569928	3.569928	NA	0.191628	0.276214	NA	0.268	NA	4.452072
1207	7	43548857	43548857	T	C	ncRNA_exonic	LOC100506895	NA	NA	NA	ncRNA_exonic	ENSG00000231638	NA	NA	NA	NA	NA	7p13	NA	NA	NA	NA	rs9639877	0.18	0.18	0.185	0.183506	0.2147	0.0863	0.1657	0.1649	0.2894	0.23	0.1	0.19	0.19	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.417826	NA	NA	NA	NA	NA	0.203	NA	4.4519666
1207	14	107095544	107095544	G	A	intergenic	LINC00221,NONE	dist=144015;dist=NONE	NA	NA	exonic	ENSG00000211970	NA	synonymous SNV	ENSG00000211970:ENST00000390630:exon1:c.C18T:p.F6F	NA	NA	14q32.33	NA	NA	NA	NA	rs182127138	0.04	0.04	NA	NA	NA	NA	NA	NA	NA	0.02	0.02	0.04	0.09	0.0482	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.16941	NA	NA	NA	NA	NA	NA	NA	4.4518
1207	16	857673	857673	G	A	intronic	PRR25	NA	NA	NA	intronic	ENSG00000167945	NA	NA	NA	NA	NA	16p13.3	NA	Name=ELF1_(SC-631),Pol2,Pol2(phosphoS2),TAF1,GABP,HEY1,HA-E2F1,Sin3Ak-20,Pol2-4H8	NA	NA	rs58297819	0.14	0.14	0.141	0.138179	0.1839	0.1667	0.1455	0.0424	0.1861	0.18	0.17	0.15	0.05	0.193	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.219499	NA	NA	0.171419	0.064038	NA	0.203	NA	4.451681
1207	9	30773962	30773962	G	T	intergenic	LOC401497,ACO1	dist=365510;dist=1610639	NA	NA	ncRNA_exonic	ENSG00000235626	NA	NA	NA	Score=521;Name=lod=174	NA	9p21.1	NA	NA	NA	NA	rs4127049	0.45	0.45	0.448	0.455871	0.5487	0.3274	0.549	0.4024	0.499	0.53	0.35	0.53	0.37	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.845489	NA	NA	NA	NA	NA	NA	NA	4.4513
1207	9	30773963	30773963	G	T	intergenic	LOC401497,ACO1	dist=365511;dist=1610638	NA	NA	ncRNA_exonic	ENSG00000235626	NA	NA	NA	Score=521;Name=lod=174	NA	9p21.1	NA	NA	NA	NA	rs4127048	0.44	0.44	0.441	0.455871	0.5487	0.3274	0.549	0.4024	0.499	0.52	0.35	0.53	0.37	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.272751	NA	NA	NA	NA	NA	NA	NA	4.4513
1207	9	139089679	139089679	G	A	intronic	LHX3	NA	NA	NA	intronic	ENSG00000107187	NA	NA	NA	NA	Name=Thyroid hormone levels	9q34.3	NA	NA	NA	NA	rs7860634	0.46	0.46	0.482	0.47504	0.5487	0.3304	0.4063	0.5908	0.4407	0.53	0.34	0.41	0.51	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.623204	NA	NA	NA	NA	NA	0.377	NA	4.4513
1207	16	33391415	33391415	A	C	intergenic	LOC390705,RNU6-76P	dist=92713;dist=72092	NA	NA	ncRNA_intronic	ENSG00000259882	NA	NA	NA	Score=415;Name=lod=65	NA	16p11.2	NA	NA	NA	NA	rs357994	NA	NA	NA	0.551118	0.5487	0.5556	0.6383	0.5227	0.5256	NA	NA	NA	NA	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.414481	NA	NA	NA	NA	ID=COSN165184;OCCURENCE=1(breast)	0.558	NA	4.4513
1207	18	7117623	7117623	G	C	intronic	LAMA1	NA	NA	NA	intronic	ENSG00000101680	NA	NA	NA	NA	NA	18p11.23	Score=786;Name=V$AHR_01	NA	Name=23	NA	rs334406	0.48	0.48	0.429	0.516374	0.5229	0.6002	0.647	0.2776	0.6534	0.52	0.55	0.64	0.24	0.5571	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.018304	NA	NA	0.468885	0.234575	NA	NA	NA	4.451115
1207	3	97941080	97941080	C	T	intergenic	OR5H15,OR5H6	dist=52595;dist=42049	NA	NA	ncRNA_exonic	ENSG00000248507	NA	NA	NA	Score=389;Name=lod=51	NA	3q11.2	NA	NA	NA	NA	rs1846078	0.62	0.62	0.658	0.623602	0.5497	0.494	0.5187	0.8812	0.5593	0.55	0.56	0.49	0.88	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.236363	NA	NA	NA	NA	NA	0.565	NA	4.4503
1207	4	154579760	154579760	C	T	intergenic	KIAA0922,TLR2	dist=21898;dist=25681	NA	NA	ncRNA_exonic	ENSG00000248208	NA	NA	NA	Score=686;Name=lod=818	NA	4q31.3	NA	NA	NA	NA	rs6819216	0.49	0.49	0.428	0.484824	0.5497	0.5575	0.6988	0.1324	0.6677	0.56	0.59	0.65	0.14	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.690831	NA	NA	NA	NA	NA	0.449	NA	4.4503
1207	17	18541855	18541855	C	G	intronic	TBC1D28	NA	NA	NA	intronic	ENSG00000189375	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	NA	NA	NA	NA	0.709465	0.5497	0.9583	0.6455	0.7103	0.6616	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.894033	NA	NA	NA	NA	NA	NA	NA	4.4503
1207	1	202920300	202920300	A	C	intronic	ADIPOR1	NA	NA	NA	intronic	ENSG00000159346	NA	NA	NA	Score=329;Name=lod=29	NA	1q32.1	NA	NA	NA	NA	rs2275737	0.65	0.65	0.622	0.636182	0.5507	0.8274	0.67	0.5598	0.6063	0.55	0.85	0.64	0.56	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.436908	1.436908	NA	NA	NA	NA	0.609	NA	4.4493
1207	1	202920304	202920304	T	C	intronic	ADIPOR1	NA	NA	NA	intronic	ENSG00000159346	NA	NA	NA	Score=329;Name=lod=29	NA	1q32.1	NA	NA	NA	NA	rs2275738	0.65	0.65	0.638	0.642572	0.5507	0.8274	0.6729	0.5825	0.6063	0.55	0.85	0.64	0.57	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.4876	2.4876	NA	NA	NA	NA	0.609	NA	4.4493
1207	3	97958054	97958054	T	C	intergenic	OR5H15,OR5H6	dist=69569;dist=25075	NA	NA	ncRNA_exonic	ENSG00000187900	NA	NA	NA	Score=415;Name=lod=65	NA	3q11.2	NA	NA	NA	NA	rs9851509	0.55	0.55	0.586	0.59385	0.5507	0.495	0.5101	0.7716	0.5593	0.51	0.53	0.45	0.69	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.234931	NA	1	NA	NA	NA	0.514	NA	4.4493
1207	19	36989005	36989005	C	T	intergenic	LOC728752,ZNF260	dist=7063;dist=12584	NA	NA	ncRNA_exonic	ENSG00000267091	NA	NA	NA	Score=601;Name=lod=370	NA	19q13.12	NA	NA	NA	NA	rs2945970	0.45	0.45	0.473	0.459265	0.5507	0.255	0.3804	0.5234	0.545	0.54	0.25	0.43	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.132702	NA	NA	NA	NA	NA	0.5	NA	4.4493
1207	17	4686414	4686414	A	C	exonic	TM4SF5	NA	synonymous SNV	TM4SF5:NM_003963:exon5:c.A585C:p.T195T	exonic	ENSG00000142484	NA	synonymous SNV	ENSG00000142484:ENST00000270560:exon5:c.A585C:p.T195T	NA	NA	17p13.2	NA	NA	NA	NA	rs3851	0.35	0.35	0.313	0.409744	0.3986	0.4504	0.2882	0.2708	0.6534	0.41	0.39	0.33	0.25	0.4212	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.001916	NA	NA	0.397907	0.309351	NA	0.348	NA	4.4489596
1207	3	179463076	179463076	A	G	intronic	USP13	NA	NA	NA	intronic	ENSG00000058056	NA	NA	NA	NA	NA	3q26.33	NA	NA	Name=3	NA	rs58527921	0.65	0.65	0.684	0.647364	0.5517	0.7093	0.5778	0.7799	0.5521	0.56	0.72	0.59	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.534207	NA	NA	NA	NA	NA	0.623	NA	4.4483
1207	14	107095535	107095535	G	C	intergenic	LINC00221,NONE	dist=144006;dist=NONE	NA	NA	exonic	ENSG00000211970	NA	synonymous SNV	ENSG00000211970:ENST00000390630:exon1:c.C27G:p.L9L	NA	NA	14q32.33	NA	NA	NA	NA	rs201905956	NA	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0517	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.704898	NA	NA	NA	NA	NA	NA	NA	4.4483
1207	1	151006539	151006539	C	A	exonic	PRUNE	NA	synonymous SNV	PRUNE:NM_021222:exon8:c.C1191A:p.G397G	exonic	ENSG00000143363	NA	synonymous SNV	ENSG00000143363:ENST00000368934:exon4:c.C486A:p.G162G,ENSG00000143363:ENST00000368935:exon4:c.C336A:p.G112G,ENSG00000143363:ENST00000368937:exon4:c.C486A:p.G162G,ENSG00000143363:ENST00000271619:exon5:c.C555A:p.G185G,ENSG00000143363:ENST00000431193:exon5:c.C486A:p.G162G,ENSG00000143363:ENST00000368936:exon7:c.C645A:p.G215G,ENSG00000143363:ENST00000271620:exon8:c.C1191A:p.G397G	NA	NA	1q21.3	NA	Name=MafK_(ab50322)	NA	NA	rs3738476	0.86	0.86	0.861	0.509385	0.503	0.5952	0.5187	0.4387	0.5164	0.87	0.88	0.86	0.81	0.8457	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.398386	NA	NA	0.869767	0.824784	NA	0.783	NA	4.4481996
1207	2	132257689	132257689	A	G	ncRNA_intronic	LOC150776,RNU6-81P	NA	NA	NA	ncRNA_intronic	ENSG00000152117	NA	NA	NA	NA	NA	2q21.1	NA	NA	NA	NA	rs3811532	0.33	0.33	0.3	0.334465	0.2187	0.6806	0.4265	0.1346	0.3016	0.2	0.64	0.37	0.13	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.197568	NA	NA	NA	NA	NA	0.283	NA	4.4479666
1207	8	15664425	15664425	C	A	intergenic	TUSC3,MSR1	dist=40267;dist=300962	NA	NA	ncRNA_exonic	ENSG00000250483	NA	NA	NA	Score=789;Name=lod=2141	NA	8p22	NA	NA	NA	NA	rs7018168	0.42	0.42	0.407	0.352835	0.5527	0.4643	0.4121	0.0885	0.3476	0.57	0.49	0.43	0.12	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.067729	NA	NA	NA	NA	NA	0.355	NA	4.4473
1207	11	124109404	124109404	C	T	intergenic	OR8G2,OR8G1	dist=13092;dist=11019	NA	NA	ncRNA_exonic	ENSG00000254845	NA	NA	NA	NA	NA	11q24.2	NA	Name=eGFP-JunD,MafK_(ab50322),USF-1	NA	NA	rs11219518	0.5	0.5	0.417	0.444688	0.5527	0.5833	0.5591	0.3154	0.2843	0.54	0.59	0.54	0.31	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.145096	NA	NA	NA	NA	NA	0.304	NA	4.4473
1207	10	43595968	43595968	A	G	exonic	RET	NA	synonymous SNV	RET:NM_020630:exon2:c.A135G:p.A45A,RET:NM_020975:exon2:c.A135G:p.A45A	exonic	ENSG00000165731	NA	synonymous SNV	ENSG00000165731:ENST00000340058:exon2:c.A135G:p.A45A,ENSG00000165731:ENST00000355710:exon2:c.A135G:p.A45A	NA	NA	10q11.21	NA	NA	NA	NA	rs1800858	0.72	0.72	0.742	0.753594	0.7435	0.5268	0.7493	0.9803	0.6943	0.7	0.53	0.78	0.91	0.7365	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.529861	NA	NA	0.739419	0.945302	NA	0.717	CLINSIG=other|non-pathogenic;CLNDBN=Hirschsprung_disease_1|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000014967.1|RCV000127776.1;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet|.;CLNDSDBID=NBK1439:CN030431:142623:ORPHA388|.	4.4472476
1207	22	41566595	41566595	C	T	intronic	EP300	NA	NA	NA	ncRNA_intronic	ENSG00000232754	NA	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs6002271	0.23	0.23	0.175	0.248403	0.3062	0.0516	0.5187	0.115	0.3804	0.31	0.06	0.51	0.12	0.3011	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.20602	NA	NA	0.278953	0.128915	NA	0.29	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000079678.1;CLNDSDB=.;CLNDSDBID=.	4.4470803
1207	2	132256559	132256559	T	C	ncRNA_intronic	LOC150776,RNU6-81P	NA	NA	NA	ncRNA_intronic	ENSG00000152117	NA	NA	NA	NA	NA	2q21.1	NA	NA	NA	NA	rs3817574	0.34	0.34	0.291	0.334665	0.2197	0.6806	0.4265	0.1346	0.3016	0.21	0.66	0.37	0.13	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.01662	NA	NA	NA	NA	NA	0.275	NA	4.4469666
1207	2	132258031	132258031	A	G	ncRNA_intronic	LOC150776,RNU6-81P	NA	NA	NA	ncRNA_intronic	ENSG00000152117	NA	NA	NA	NA	NA	2q21.1	NA	NA	NA	NA	rs3108473	0.32	0.32	0.253	0.334665	0.2197	0.6806	0.4265	0.1346	0.3016	0.19	0.63	0.36	0.13	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.133201	NA	NA	NA	NA	NA	0.29	NA	4.4469666
1207	2	132258815	132258815	G	A	ncRNA_intronic	LOC150776,RNU6-81P	NA	NA	NA	ncRNA_intronic	ENSG00000152117	NA	NA	NA	NA	NA	2q21.1	NA	NA	NA	NA	rs12691986	0.32	0.32	0.248	0.334665	0.2197	0.6806	0.4265	0.1346	0.3016	0.2	0.63	0.36	0.13	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.337555	NA	NA	NA	NA	NA	0.029	NA	4.4469666
1207	2	132266301	132266301	C	T	ncRNA_intronic	LOC150776,RNU6-81P	NA	NA	NA	ncRNA_intronic	ENSG00000152117	NA	NA	NA	NA	NA	2q21.1	NA	NA	NA	NA	rs13011045	0.34	0.34	0.251	0.334665	0.2197	0.6806	0.4265	0.1346	0.3016	0.21	0.66	0.38	0.13	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.131767	NA	NA	NA	NA	NA	NA	NA	4.4469666
1207	2	132266303	132266303	C	A	ncRNA_intronic	LOC150776,RNU6-81P	NA	NA	NA	ncRNA_intronic	ENSG00000152117	NA	NA	NA	NA	NA	2q21.1	NA	NA	NA	NA	rs13011046	0.34	0.34	0.243	0.334665	0.2197	0.6806	0.4265	0.1346	0.3016	0.21	0.66	0.38	0.13	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.148191	NA	NA	NA	NA	NA	NA	NA	4.4469666
1207	10	5249213	5249213	A	G	intronic	AKR1C4	NA	NA	NA	ncRNA_exonic	ENSG00000228291	NA	NA	NA	Score=686;Name=lod=818	NA	10p15.1	NA	NA	NA	NA	rs1889457	0.82	0.82	0.788	0.796326	0.8867	0.9871	0.8862	0.4705	0.8834	0.89	0.99	0.88	0.45	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.102621	NA	NA	NA	NA	NA	0.732	NA	4.4466333
1207	10	5249377	5249377	A	T	intronic	AKR1C4	NA	NA	NA	ncRNA_exonic	ENSG00000228291	NA	NA	NA	Score=686;Name=lod=818	NA	10p15.1	NA	NA	NA	NA	rs1334474	0.81	0.81	0.782	0.790735	0.8867	0.9861	0.8847	0.4508	0.8834	0.89	0.99	0.88	0.44	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.340056	NA	NA	NA	NA	NA	0.717	NA	4.4466333
1207	12	123460823	123460823	A	G	UTR5	OGFOD2	NM_024623:c.-117A>G	NA	NA	exonic	ENSG00000111325	NA	synonymous SNV	ENSG00000111325:ENST00000537966:exon3:c.A213G:p.P71P	NA	NA	12q24.31	NA	Name=GATA-1	NA	NA	rs883563	0.77	0.77	0.765	0.750998	0.7674	0.8343	0.6945	0.7352	0.7096	0.77	0.83	0.72	0.73	0.786	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.077771	NA	NA	NA	NA	NA	0.761	NA	4.4466
1207	10	85992511	85992511	T	C	exonic	LRIT1	NA	synonymous SNV	LRIT1:NM_015613:exon4:c.A1044G:p.P348P	exonic	ENSG00000148602	NA	synonymous SNV	ENSG00000148602:ENST00000372105:exon4:c.A1044G:p.P348P	NA	NA	10q23.1	NA	NA	NA	NA	rs3814209	0.47	0.47	0.47	0.492812	0.3976	0.2579	0.4798	0.8661	0.3374	0.41	0.26	0.44	0.86	0.4323	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.243153	NA	NA	0.390349	0.77803	NA	0.565	NA	4.4464176
1207	11	5906143	5906143	T	C	exonic	OR52E4	NA	synonymous SNV	OR52E4:NM_001005165:exon1:c.T621C:p.Y207Y	exonic	ENSG00000180974	NA	synonymous SNV	ENSG00000180974:ENST00000316987:exon1:c.T621C:p.Y207Y	NA	NA	11p15.4	NA	NA	NA	NA	rs11823809	0.38	0.38	0.365	0.357827	0.4085	0.3641	0.402	0.3222	0.316	0.42	0.36	0.42	0.32	0.3902	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.177684	NA	NA	0.421904	0.341209	NA	0.355	NA	4.4460626
1207	14	107095556	107095556	T	C	intergenic	LINC00221,NONE	dist=144027;dist=NONE	NA	NA	exonic	ENSG00000211970	NA	synonymous SNV	ENSG00000211970:ENST00000390630:exon1:c.A6G:p.K2K	NA	NA	14q32.33	NA	NA	NA	NA	rs186772573	0.05	0.05	NA	NA	NA	NA	NA	NA	NA	0.03	0.02	0.04	0.12	0.0448	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.450762	NA	NA	0.009814	0.043529	NA	NA	NA	4.445386
1207	22	17402322	17402322	G	A	intergenic	HSFY1P1,GAB4	dist=92097;dist=40505	NA	NA	downstream	ENSG00000253460	NA	NA	NA	Score=414;Name=lod=64	NA	22q11.1	NA	NA	NA	NA	rs13433557	0.06	0.06	0.064	0.0587061	0.0547	NA	0.0533	0.1452	0.0102	0.05	NA	0.05	0.16	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.289866	NA	NA	NA	NA	NA	0.08	NA	4.4453
1207	4	56471433	56471433	A	G	intronic	NMU	NA	NA	NA	intronic	ENSG00000109255	NA	NA	NA	NA	NA	4q12	NA	NA	Name=3	NA	rs1873091	0.14	0.14	0.123	0.145168	0.2048	0.0972	0.1542	0.0484	0.2577	0.2	0.11	0.19	0.05	0.1726	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.401729	NA	NA	0.177326	0.067635	NA	0.123	NA	4.445274
1207	7	20721084	20721084	T	C	intronic	ABCB5	NA	NA	NA	intronic	ENSG00000004846	NA	NA	NA	NA	NA	7p21.1	NA	Name=FOXA2_(SC-6554)	NA	NA	rs11764760	0.19	0.19	0.178	0.188299	0.1809	0.2272	0.183	0.1725	0.181	0.19	0.23	0.18	0.14	0.1889	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.574203	NA	NA	0.185116	0.190195	NA	0.145	NA	4.445084
1208	3	178962517	178962517	T	C	intronic	KCNMB3	NA	NA	NA	intronic	ENSG00000171121	NA	NA	NA	NA	NA	3q26.32	NA	Name=FOXA1_(C-20)	NA	NA	rs4080957	0.22	0.22	0.222	0.279553	0.1978	0.1081	0.2594	0.4955	0.2628	0.18	0.08	0.25	0.45	0.1874	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.859819	NA	NA	0.169809	0.399682	NA	0.355	NA	4.444991
1208	17	80045147	80045147	G	A	intronic	FASN	NA	NA	NA	intronic	ENSG00000169710	NA	NA	NA	NA	NA	17q25.3	NA	Name=Pol2	NA	NA	rs17848935	0.11	0.11	0.091	0.0858626	0.1859	0.0506	0.1081	0.0272	0.0828	0.2	0.06	0.13	0.04	0.1682	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.760525	NA	NA	0.201353	0.053138	NA	0.087	NA	4.444547
1208	9	34290407	34290407	C	T	intronic	KIF24	NA	NA	NA	intronic	ENSG00000186638	NA	NA	NA	NA	NA	9p13.3	Score=916;Name=V$PAX4_02	NA	NA	NA	rs11790773	0.17	0.17	0.16	0.184704	0.166	0.2748	0.1628	0.0446	0.316	0.17	0.26	0.17	0.05	0.2067	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.375787	2.375787	NA	0.182906	0.05409	NA	0.109	NA	4.444394
1208	5	34687246	34687246	G	A	intronic	RAI14	NA	NA	NA	intronic	ENSG00000039560	NA	NA	NA	NA	NA	5p13.2	NA	Name=Rad21,TBP,CTCF,c-Fos,KAP1,ZNF263,Pol2,SMC3_(ab9263)	NA	NA	rs895357	0.33	0.33	0.288	0.361222	0.5557	0.126	0.4409	0.1271	0.6636	0.56	0.09	0.45	0.15	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.764541	NA	NA	NA	NA	NA	0.239	NA	4.4443
1208	12	57492996	57492996	G	A	intronic	STAT6	NA	NA	NA	intronic	ENSG00000166888	NA	NA	NA	NA	NA	12q13.3	NA	NA	Name=2	NA	rs841718	0.45	0.45	0.389	0.42492	0.5557	0.3313	0.5375	0.2943	0.4836	0.56	0.3	0.56	0.36	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.09716	NA	NA	NA	NA	NA	0.341	NA	4.4443
1208	14	22971137	22971137	G	T	intergenic	OR4E2,DAD1	dist=836899;dist=62670	NA	NA	upstream;downstream	ENSG00000211851;ENSG00000211850	NA	NA	NA	NA	NA	14q11.2	NA	NA	Name=9	NA	rs17118919	0.06	0.06	0.054	0.0648962	0.0557	0.002	0.0677	0.1339	0.044	0.06	NA	0.07	0.11	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.390478	1.390478	NA	NA	NA	NA	0.058	NA	4.4443
1208	16	14334526	14334526	C	T	intronic	MKL2	NA	NA	NA	exonic	ENSG00000186260	NA	synonymous SNV	ENSG00000186260:ENST00000573051:exon9:c.C981T:p.F327F	NA	NA	16p13.12	NA	NA	NA	NA	rs45520934	0.07	0.07	0.056	0.0463259	0.1471	NA	0.062	0.0174	0.0184	0.15	NA	0.07	0.02	0.1039	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.32399	NA	NA	0.138122	0.03653	NA	0.123	NA	4.4442113
1208	17	62407030	62407030	A	G	intronic	PECAM1	NA	NA	NA	intergenic	ENSG00000256358,ENSG00000271605	dist=20980;dist=54539	NA	NA	NA	NA	17q23.3	NA	NA	Name=11	NA	rs45588632	0.04	0.04	0.031	0.0311502	0.0775	0.001	0.0418	0.0008	0.0481	0.08	0.0017	0.05	NA	0.0807	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.895153	NA	NA	0.064932	0.0128	NA	0.036	NA	4.4435347
1208	1	167992344	167992344	T	A	intronic	DCAF6	NA	NA	NA	UTR3	ENSG00000143164	ENST00000470721:c.*201T>A	NA	NA	NA	NA	1q24.2	Score=798;Name=V$OCT1_04	NA	NA	NA	rs201541	0.42	0.42	0.4	0.433506	0.3608	0.1895	0.5432	0.7549	0.2474	0.36	0.19	0.48	0.75	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.089051	NA	NA	0.362351	0.684249	NA	0.464	NA	4.4435157
1208	8	15664697	15664697	T	C	intergenic	TUSC3,MSR1	dist=40539;dist=300690	NA	NA	ncRNA_exonic	ENSG00000250483	NA	NA	NA	Score=612;Name=lod=409	NA	8p22	NA	NA	NA	NA	rs1349978	0.45	0.45	0.446	0.39357	0.5567	0.4841	0.4164	0.2171	0.3548	0.57	0.52	0.43	0.22	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.578657	NA	NA	NA	NA	NA	0.391	NA	4.4433
1208	15	40494960	40494960	A	C	intronic	BUB1B	NA	NA	NA	intronic	ENSG00000156970	NA	NA	NA	NA	NA	15q15.1	NA	NA	Name=7	NA	rs12898804	0.36	0.36	0.335	0.348642	0.5567	0.2698	0.4452	0.09	0.4969	0.55	0.28	0.43	0.1	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.777763	1.777763	NA	NA	NA	NA	0.399	NA	4.4433
1208	16	49557482	49557482	C	T	intronic	ZNF423	NA	NA	NA	intronic	ENSG00000102935	NA	NA	NA	NA	NA	16q12.1	NA	NA	Name=2	NA	rs2287314	0.58	0.58	0.618	0.578874	0.5567	0.4712	0.5058	0.7988	0.4673	0.56	0.46	0.53	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.609598	NA	NA	NA	NA	NA	0.645	NA	4.4433
1208	15	89424581	89424581	A	G	intronic	HAPLN3	NA	NA	NA	intronic	ENSG00000140511	NA	NA	NA	NA	NA	15q26.1	Score=908;Name=V$PAX4_03	NA	NA	NA	rs938605	0.23	0.23	0.224	0.257588	0.1789	0.253	0.2133	0.3434	0.2587	0.18	0.23	0.22	0.33	0.2056	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.776205	NA	NA	0.172406	0.318864	NA	0.312	NA	4.443094
1208	1	9324571	9324571	T	C	exonic	H6PD	NA	synonymous SNV	H6PD:NM_004285:exon5:c.T2019C:p.Y673Y	exonic	ENSG00000049239	NA	synonymous SNV	ENSG00000049239:ENST00000377403:exon5:c.T2019C:p.Y673Y,ENSG00000049239:ENST00000602477:exon5:c.T2052C:p.Y684Y	NA	NA	1p36.22	NA	NA	NA	NA	rs9434742	0.36	0.36	0.347	0.402955	0.4115	0.1657	0.4207	0.497	0.499	0.44	0.14	0.42	0.44	0.4157	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.52844	NA	NA	0.396463	0.487971	ID=COSM426841;OCCURENCE=1(breast)	0.413	NA	4.4430036
1208	1	209799253	209799253	A	G	exonic	LAMB3	NA	synonymous SNV	LAMB3:NM_001017402:exon13:c.T1716C:p.C572C,LAMB3:NM_000228:exon14:c.T1716C:p.C572C,LAMB3:NM_001127641:exon14:c.T1716C:p.C572C	exonic	ENSG00000196878	NA	synonymous SNV	ENSG00000196878:ENST00000391911:exon13:c.T1716C:p.C572C,ENSG00000196878:ENST00000356082:exon14:c.T1716C:p.C572C,ENSG00000196878:ENST00000367030:exon14:c.T1716C:p.C572C	Score=499;Name=lod=142	NA	1q32.2	NA	NA	NA	NA	rs2179402	0.77	0.77	0.765	0.764976	0.7326	0.8304	0.7075	0.7837	0.7464	0.72	0.83	0.76	0.77	0.7565	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.091924	NA	NA	0.735	0.767484	NA	0.775	NA	4.4425666
1208	5	125967404	125967404	T	A	upstream	C5orf48	NA	NA	NA	upstream	ENSG00000196900	NA	NA	NA	Score=304;Name=lod=23	NA	5q23.2	NA	NA	NA	NA	rs6862980	0.2	0.2	0.218	0.23123	0.0606	0.2073	0.0893	0.5832	0.0562	0.05	0.17	0.1	0.52	0.1081	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.830579	NA	NA	0.055465	0.490695	NA	0.312	NA	4.4425016
1208	5	156849722	156849722	C	A	intergenic	CYFIP2,NIPAL4	dist=27116;dist=37305	NA	NA	ncRNA_exonic	ENSG00000253155	NA	NA	NA	Score=743;Name=lod=1391	NA	5q33.3	NA	NA	NA	NA	rs1833736	0.56	0.56	0.552	0.567891	0.5577	0.7123	0.5634	0.4448	0.5992	0.57	0.69	0.52	0.43	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.521652	NA	NA	NA	NA	NA	0.522	NA	4.4423
1208	14	51245666	51245666	T	C	intronic	NIN	NA	NA	NA	intronic	ENSG00000100503	NA	NA	NA	NA	NA	14q22.1	NA	NA	Name=48	NA	rs7143959	0.56	0.56	0.516	0.538738	0.5577	0.8204	0.5865	0.1694	0.6943	0.58	0.83	0.59	0.17	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.44091	NA	NA	NA	NA	NA	0.507	NA	4.4423
1208	10	73544604	73544604	T	C	intronic	CDH23	NA	NA	NA	intronic	ENSG00000107736	NA	NA	NA	NA	NA	10q22.1	NA	Name=ZNF263	NA	NA	rs7068810	0.21	0.21	0.198	0.201677	0.1968	0.2401	0.1657	0.2474	0.1309	0.19	0.21	0.15	0.26	0.1841	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.141428	NA	NA	0.176965	0.25118	NA	0.239	NA	4.442135
1208	15	89385151	89385151	T	G	intronic	ACAN	NA	NA	NA	intronic	ENSG00000157766	NA	NA	NA	NA	NA	15q26.1	NA	Name=CTCF	NA	NA	rs2293087	0.44	0.44	0.441	0.444688	0.5586	0.2897	0.3674	0.4902	0.4806	0.56	0.25	0.43	0.48	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.273259	NA	NA	NA	NA	NA	0.457	NA	4.4414
1208	19	12484469	12484469	G	A	intergenic	ZNF442,ZNF799	dist=7994;dist=16359	NA	NA	ncRNA_exonic	ENSG00000231361	NA	NA	NA	Score=295;Name=lod=21	NA	19p13.2	NA	NA	NA	NA	rs12461201	0.63	0.63	0.614	0.621605	0.5586	0.9038	0.634	0.4054	0.6789	0.55	0.93	0.59	0.44	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.060907	NA	NA	NA	NA	NA	0.594	NA	4.4414
1208	11	290816	290816	A	G	exonic	ATHL1	NA	synonymous SNV	ATHL1:NM_025092:exon4:c.A609G:p.A203A	exonic	ENSG00000142102	NA	synonymous SNV	ENSG00000142102:ENST00000409479:exon3:c.A609G:p.A203A,ENSG00000142102:ENST00000409548:exon4:c.A609G:p.A203A,ENSG00000142102:ENST00000409655:exon4:c.A78G:p.A26A	NA	NA	11p15.5	Score=869;Name=V$NF1_Q6	NA	NA	NA	rs10902120	0.65	0.65	0.665	0.666534	0.7475	0.4504	0.6816	0.7292	0.7106	0.75	0.44	0.71	0.71	0.7155	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.563384	NA	NA	0.763256	0.727871	NA	0.688	NA	4.4404106
1208	1	183077615	183077615	C	T	intronic	LAMC1	NA	NA	NA	intronic	ENSG00000135862	NA	NA	NA	NA	NA	1q25.3	Score=872;Name=V$FREAC7_01	NA	NA	NA	rs3765521	0.51	0.51	0.459	0.505192	0.5596	0.629	0.6138	0.2398	0.6033	0.57	0.58	0.57	0.29	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.477515	NA	NA	NA	NA	NA	0.42	NA	4.4404
1208	5	150838293	150838293	T	C	intronic	SLC36A1	NA	NA	NA	intronic	ENSG00000123643	NA	NA	NA	NA	NA	5q33.1	Score=830;Name=V$SRF_Q6	NA	NA	NA	rs35074529	0.61	0.61	0.636	0.645367	0.5596	0.6508	0.4539	0.7383	0.7382	0.56	0.63	0.48	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.254457	NA	NA	NA	NA	NA	0.565	NA	4.4404
1208	12	999762	999762	A	G	intronic	WNK1	NA	NA	NA	intronic	ENSG00000060237	NA	NA	NA	NA	NA	12p13.33	NA	NA	Name=5	NA	rs2255390	0.55	0.55	0.566	0.582268	0.5596	0.4663	0.5548	0.643	0.6626	0.56	0.48	0.54	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.188026	NA	NA	NA	NA	NA	0.688	NA	4.4404
1208	7	140110781	140110781	G	C	intronic	RAB19	NA	NA	NA	exonic	ENSG00000146955	NA	synonymous SNV	ENSG00000146955:ENST00000275874:exon3:c.G210C:p.S70S	NA	NA	7q34	NA	NA	NA	NA	rs2971689	0.06	0.06	0.051	0.0878594	0.1312	0.003	0.0648	0.028	0.228	0.14	0.0035	0.06	0.02	0.1208	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.672559	NA	NA	0.141395	0.036995	NA	0.058	NA	4.4399383
1208	3	169558025	169558025	C	T	exonic	LRRC31	NA	synonymous SNV	LRRC31:NM_001277128:exon8:c.G1236A:p.A412A,LRRC31:NM_024727:exon9:c.G1404A:p.A468A	exonic	ENSG00000114248	NA	synonymous SNV	ENSG00000114248:ENST00000264676:exon8:c.G1236A:p.A412A,ENSG00000114248:ENST00000316428:exon9:c.G1404A:p.A468A	NA	NA	3q26.2	NA	NA	NA	NA	rs3732451	0.54	0.54	0.523	0.558906	0.3897	0.754	0.6037	0.5499	0.5123	0.39	0.76	0.54	0.52	0.469	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.771413	NA	NA	0.368031	0.497024	NA	0.449	NA	4.4399356
1208	1	111550436	111550436	C	T	intergenic	LRIF1,DRAM2	dist=43870;dist=109518	NA	NA	ncRNA_exonic	ENSG00000225672	NA	NA	NA	Score=498;Name=lod=141	NA	1p13.3	NA	NA	NA	NA	rs1149191	0.5	0.5	0.519	0.491813	0.5606	0.3552	0.5548	0.6339	0.3252	0.55	0.35	0.51	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.076908	NA	NA	NA	NA	NA	0.442	NA	4.4394
1208	1	183100598	183100598	T	G	intronic	LAMC1	NA	NA	NA	intronic	ENSG00000135862	NA	NA	NA	NA	NA	1q25.3	NA	NA	Name=7	NA	rs4047797	NA	NA	NA	0.525759	0.5606	0.624	0.6225	0.3253	0.591	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.682682	NA	NA	NA	NA	NA	NA	NA	4.4394
1208	1	189960204	189960204	A	G	intergenic	NONE,FAM5C	dist=NONE;dist=106593	NA	NA	ncRNA_exonic	ENSG00000230987	NA	NA	NA	Score=687;Name=lod=826	NA	1q31.1	NA	NA	NA	NA	rs1320748	0.65	0.65	0.626	0.675919	0.5606	0.6062	0.7147	0.8343	0.6247	0.56	0.61	0.65	0.83	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.004439	NA	NA	NA	NA	NA	0.703	NA	4.4394
1208	2	174202964	174202964	C	T	intergenic	MLK7-AS1,CDCA7	dist=56200;dist=16597	NA	NA	ncRNA_exonic	ENSG00000236391	NA	NA	NA	Score=352;Name=lod=36	NA	2q31.1	NA	NA	NA	NA	rs13020898	0.47	0.47	0.444	0.444888	0.5606	0.5615	0.5548	0.2065	0.4499	0.55	0.55	0.54	0.21	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.891188	NA	NA	NA	NA	NA	0.551	NA	4.4394
1208	4	58969470	58969470	T	C	intergenic	LOC255130,NONE	dist=898005;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000248660	NA	NA	NA	Score=300;Name=lod=22	NA	4q12	NA	NA	NA	NA	rs7698082	0.52	0.52	0.476	0.511581	0.5606	0.4891	0.6239	0.469	0.4622	0.55	0.5	0.58	0.44	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.658512	NA	NA	NA	NA	NA	0.478	NA	4.4394
1208	17	73552062	73552062	G	C	intronic	LLGL2	NA	NA	NA	intronic	ENSG00000073350	NA	NA	NA	NA	NA	17q25.1	NA	Name=FOXA1_(C-20),RXRA,FOXA2_(SC-6554),FOXA1_(SC-101058)	NA	NA	rs2305528	0.45	0.45	0.464	0.450679	0.5606	0.4683	0.3905	0.2693	0.6074	0.57	0.48	0.43	0.24	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.241602	NA	NA	NA	NA	NA	0.471	NA	4.4394
1208	19	16021888	16021888	G	A	intergenic	CYP4F2,CYP4F11	dist=13004;dist=1292	NA	NA	ncRNA_exonic	ENSG00000267056	NA	NA	NA	Score=514;Name=lod=164	NA	19p13.12	NA	NA	NA	NA	rs12459140	0.47	0.47	0.455	0.427915	0.5606	0.2738	0.464	0.4607	0.3804	0.56	0.3	0.48	0.5	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.149725	NA	NA	NA	NA	NA	0.616	NA	4.4394
1208	19	16021907	16021907	T	C	intergenic	CYP4F2,CYP4F11	dist=13023;dist=1273	NA	NA	ncRNA_exonic	ENSG00000267056	NA	NA	NA	Score=514;Name=lod=164	NA	19p13.12	NA	NA	NA	NA	rs12461990	0.47	0.47	0.426	0.427915	0.5606	0.2738	0.464	0.4607	0.3804	0.56	0.3	0.48	0.5	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.452375	1.452375	NA	NA	NA	NA	0.616	NA	4.4394
1208	19	16022000	16022000	A	G	intergenic	CYP4F2,CYP4F11	dist=13116;dist=1180	NA	NA	ncRNA_exonic	ENSG00000267056	NA	NA	NA	Score=701;Name=lod=938	NA	19p13.12	NA	NA	NA	NA	rs10518254	0.47	0.47	0.442	0.427915	0.5606	0.2738	0.464	0.4607	0.3804	0.56	0.3	0.48	0.5	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.010219	NA	NA	NA	NA	NA	0.616	NA	4.4394
1208	22	22707576	22707576	T	A	intergenic	LOC96610,ZNF280B	dist=30252;dist=131196	NA	NA	exonic	ENSG00000211647	NA	nonsynonymous SNV	ENSG00000211647:ENST00000390293:exon2:c.T164A:p.F55Y	NA	NA	22q11.22	NA	NA	NA	NA	rs117042445	0.13	0.13	0.059	0.195487	0.2207	0.2034	0.1585	0.1778	0.2117	0.14	0.13	0.11	0.12	0.1734	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.490735	NA	1	NA	NA	NA	0.116	NA	4.4392334
1208	4	70284745	70284745	T	C	intergenic	UGT2B28,UGT2B4	dist=123977;dist=61138	NA	NA	ncRNA_exonic	ENSG00000249956	NA	NA	NA	Score=450;Name=lod=90	NA	4q13.2	NA	NA	NA	NA	rs2642839	0.47	0.47	0.378	0.475439	0.5616	0.4901	0.5029	0.3548	0.5153	0.53	0.48	0.47	0.36	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.071909	NA	0	NA	NA	NA	0.333	NA	4.4384
1208	11	67399970	67399970	C	T	intronic	TBX10	NA	NA	NA	intronic	ENSG00000167800	NA	NA	NA	NA	NA	11q13.2	NA	Name=RXRA,p300,HNF4G_(SC-6558),HNF4A,TCF4,SP1,HDAC2_(SC-6296),HNF4A_(H-171)	NA	NA	rs3765088	0.46	0.46	0.423	0.430511	0.5616	0.6587	0.3746	0.0537	0.6094	0.57	0.65	0.42	0.08	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.957467	NA	NA	NA	NA	NA	0.384	NA	4.4384
1208	4	56471404	56471404	C	T	intronic	NMU	NA	NA	NA	intronic	ENSG00000109255	NA	NA	NA	NA	NA	4q12	NA	NA	Name=3	NA	rs1873090	0.15	0.15	0.137	0.163938	0.2058	0.0952	0.1556	0.1195	0.2577	0.2	0.1	0.19	0.09	0.1784	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.055879	NA	NA	0.177558	0.128461	NA	0.123	NA	4.438242
1208	10	29812602	29812602	G	T	exonic	SVIL	NA	synonymous SNV	SVIL:NM_003174:exon13:c.C1663A:p.R555R,SVIL:NM_021738:exon15:c.C2941A:p.R981R	exonic	ENSG00000197321	NA	synonymous SNV	ENSG00000197321:ENST00000375400:exon13:c.C1663A:p.R555R,ENSG00000197321:ENST00000355867:exon15:c.C2941A:p.R981R,ENSG00000197321:ENST00000375398:exon17:c.C2941A:p.R981R	NA	NA	10p11.23	NA	NA	NA	NA	rs7070678	0.36	0.36	0.384	0.382388	0.4284	0.0804	0.438	0.562	0.364	0.44	0.1	0.44	0.49	0.3909	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.107747	NA	NA	0.409419	0.546754	ID=COSM1347520;OCCURENCE=1(large_intestine)	0.493	NA	4.4379476
1208	10	94967039	94967039	C	T	intergenic	CYP26A1,MYOF	dist=129398;dist=99147	NA	NA	ncRNA_exonic	ENSG00000237417	NA	NA	NA	Score=647;Name=lod=566	NA	10q23.33	NA	NA	NA	NA	rs7070948	0.38	0.38	0.387	0.387979	0.5626	0.0526	0.4107	0.5136	0.3681	0.55	0.06	0.44	0.45	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.155282	NA	NA	NA	NA	NA	0.355	NA	4.4374
1208	16	10934763	10934763	A	T	intergenic	TVP23A,CIITA	dist=22142;dist=36292	NA	NA	ncRNA_exonic	ENSG00000262488	NA	NA	NA	Score=599;Name=lod=361	NA	16p13.13	NA	NA	NA	NA	rs12920435	0.55	0.55	0.51	0.529353	0.5626	0.5437	0.6484	0.4077	0.5603	0.58	0.54	0.65	0.43	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.342214	NA	NA	NA	NA	NA	0.652	NA	4.4374
1208	20	3214819	3214819	T	G	exonic	SLC4A11	NA	synonymous SNV	SLC4A11:NM_032034:exon4:c.A481C:p.R161R,SLC4A11:NM_001174089:exon5:c.A433C:p.R145R,SLC4A11:NM_001174090:exon5:c.A562C:p.R188R	exonic	ENSG00000088836	NA	synonymous SNV	ENSG00000088836:ENST00000380056:exon4:c.A481C:p.R161R,ENSG00000088836:ENST00000380059:exon5:c.A562C:p.R188R,ENSG00000088836:ENST00000437836:exon5:c.A433C:p.R145R,ENSG00000088836:ENST00000539553:exon5:c.A433C:p.R145R	NA	NA	20p13	NA	NA	NA	NA	rs3827075	0.49	0.49	0.433	0.479832	0.3956	0.5357	0.4251	0.671	0.2894	0.39	0.52	0.45	0.66	0.4365	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.922011	NA	NA	0.397326	0.644122	NA	0.348	NA	4.4372406
1208	6	159188282	159188282	T	G	intronic	EZR	NA	NA	NA	intronic	ENSG00000092820	NA	NA	NA	NA	NA	6q25.3	NA	Name=Pol2	NA	NA	rs9364994	0.11	0.11	0.085	0.127995	0.1918	0.0734	0.1023	0.0159	0.2883	0.2	0.06	0.13	0.03	0.1778	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.351359	NA	NA	0.193953	0.048797	NA	0.072	NA	4.436447
1208	1	183100596	183100596	A	G	intronic	LAMC1	NA	NA	NA	intronic	ENSG00000135862	NA	NA	NA	NA	NA	1q25.3	NA	NA	Name=7	NA	rs2333619	NA	NA	NA	0.530751	0.5636	0.624	0.6254	0.3313	0.6033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.195021	NA	NA	NA	NA	NA	NA	NA	4.4364
1208	4	106600338	106600338	A	C	UTR3	ARHGEF38	NM_001242729:c.*1244A>C	NA	NA	ncRNA_exonic	ENSG00000248778	NA	NA	NA	NA	NA	4q24	NA	NA	NA	NA	rs11731386	0.04	0.04	0.038	0.0321486	0.0636	NA	0.0591	0.0272	0.0204	0.07	NA	0.07	0.02	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.445319	NA	NA	NA	NA	NA	0.029	NA	4.4364
1208	19	52376952	52376952	T	A	exonic	ZNF577	NA	synonymous SNV	ZNF577:NM_032679:exon7:c.A291T:p.V97V	exonic	ENSG00000161551	NA	synonymous SNV	ENSG00000161551:ENST00000458390:exon6:c.A291T:p.V97V,ENSG00000161551:ENST00000301399:exon7:c.A291T:p.V97V	NA	NA	19q13.41	NA	NA	NA	NA	rs8107969	0.45	0.45	0.45	0.50639	0.3897	0.3026	0.4553	0.68	0.638	0.4	0.31	0.48	0.68	0.4545	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.068722	NA	NA	0.386602	0.634816	NA	0.594	NA	4.4358646
1208	20	47850182	47850182	C	T	exonic	DDX27	NA	synonymous SNV	DDX27:NM_017895:exon11:c.C1302T:p.F434F	exonic	ENSG00000124228	NA	synonymous SNV	ENSG00000124228:ENST00000371764:exon11:c.C1302T:p.F434F	Score=543;Name=lod=214	NA	20q13.13	NA	NA	NA	NA	rs238148	0.65	0.65	0.632	0.605831	0.7644	0.5258	0.647	0.525	0.6053	0.75	0.52	0.67	0.6	0.6969	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.223922	NA	NA	0.769651	0.552202	NA	0.623	NA	4.4357156
1208	17	28885367	28885367	A	G	intergenic	GOSR1,TBC1D29	dist=31535;dist=1217	NA	NA	ncRNA_exonic	ENSG00000266775	NA	NA	NA	Score=325;Name=lod=28	NA	17q11.2	NA	NA	NA	NA	rs216453	0.64	0.64	0.663	0.655751	0.5646	0.7629	0.5576	0.7511	0.5798	0.57	0.74	0.54	0.71	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.325395	NA	NA	NA	NA	NA	0.478	NA	4.4354
1209	6	167711418	167711418	A	G	intronic	UNC93A	NA	NA	NA	intronic	ENSG00000112494	NA	NA	NA	NA	NA	6q27	NA	Name=SETDB1	NA	NA	rs1555033	0.22	0.22	0.218	0.204872	0.1759	0.2212	0.1441	0.2995	0.1329	0.17	0.22	0.19	0.31	0.1904	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.228997	NA	NA	0.198721	0.295279	NA	0.196	NA	4.434979
1209	19	49950356	49950356	C	G	exonic	PIH1D1	NA	synonymous SNV	PIH1D1:NM_017916:exon7:c.G612C:p.G204G	exonic	ENSG00000104872	NA	synonymous SNV	ENSG00000104872:ENST00000262265:exon7:c.G612C:p.G204G,ENSG00000104872:ENST00000601807:exon7:c.G579C:p.G193G,ENSG00000104872:ENST00000596049:exon8:c.G612C:p.G204G	Score=349;Name=lod=35	NA	19q13.33	NA	NA	NA	NA	rs12443	0.67	0.67	0.684	0.677915	0.7545	0.4067	0.6412	0.8964	0.6094	0.74	0.38	0.66	0.89	0.7105	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.860508	NA	NA	0.76686	0.861779	ID=COSM1162800;OCCURENCE=1(pancreas)	0.783	NA	4.4348066
1209	6	31239296	31239296	G	C	intronic	HLA-C	NA	NA	NA	intronic	ENSG00000204525	NA	NA	NA	NA	NA	6p21.33	NA	Name=Pol2-4H8,Pol2,NFKB	NA	NA	rs9264666	0.58	0.58	0.401	0.599641	0.5656	0.6905	0.6182	0.5318	0.6196	0.55	0.64	0.57	0.54	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.840853	NA	NA	NA	NA	NA	0.072	NA	4.4344
1209	19	51359503	51359503	A	G	exonic	KLK3	NA	synonymous SNV	KLK3:NM_001030047:exon2:c.A54G:p.A18A,KLK3:NM_001030048:exon2:c.A54G:p.A18A,KLK3:NM_001648:exon2:c.A54G:p.A18A	exonic	ENSG00000142515	NA	synonymous SNV	ENSG00000142515:ENST00000326003:exon2:c.A54G:p.A18A,ENSG00000142515:ENST00000360617:exon2:c.A54G:p.A18A,ENSG00000142515:ENST00000422986:exon2:c.A54G:p.A18A,ENSG00000142515:ENST00000593997:exon2:c.A54G:p.A18A,ENSG00000142515:ENST00000595392:exon2:c.A54G:p.A18A,ENSG00000142515:ENST00000595952:exon2:c.A54G:p.A18A,ENSG00000142515:ENST00000597483:exon2:c.A54G:p.A18A	NA	NA	19q13.33	NA	NA	NA	NA	rs1135766	0.4	0.4	0.355	0.339856	0.4195	0.4851	0.4914	0.1921	0.2004	0.42	0.49	0.49	0.19	0.3961	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.375147	NA	NA	0.41686	0.243078	ID=COSM1395572,COSM1395573;OCCURENCE=1(large_intestine)	0.348	NA	4.4342066
1209	19	3534842	3534842	G	A	UTR3	FZR1	NM_016263:c.*8G>A,NM_001136197:c.*8G>A,NM_001136198:c.*8G>A	NA	NA	UTR3	ENSG00000105325	ENST00000441788:c.*8G>A	NA	NA	NA	NA	19p13.3	NA	Name=Pol2(phosphoS2),Pol2	NA	NA	rs10155	0.4	0.4	0.364	0.348043	0.2942	0.7976	0.4726	0.0151	0.3016	0.3	0.83	0.41	0.03	0.3344	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.167553	NA	NA	0.270698	0.062216	NA	0.297	NA	4.4340354
1209	8	131414257	131414257	G	A	intronic	ASAP1	NA	NA	NA	intronic	ENSG00000153317	NA	NA	NA	NA	NA	8q24.21	NA	NA	Name=13	NA	rs10090767	0.29	0.29	0.296	0.285942	0.2783	0.0764	0.2954	0.5144	0.1943	0.28	0.09	0.3	0.51	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.603743	1.603743	NA	0.288184	0.443642	NA	0.377	NA	4.433516
1209	1	33985353	33985353	C	G	intronic	CSMD2	NA	NA	NA	intronic	ENSG00000121904	NA	NA	NA	NA	NA	1p35.1	NA	Name=PU.1	NA	NA	rs2641959	0.63	0.63	0.675	0.64357	0.5666	0.7341	0.5231	0.7103	0.6247	0.56	0.75	0.53	0.67	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.550632	NA	NA	NA	NA	NA	0.775	NA	4.4334
1209	11	49385596	49385596	A	G	intergenic	FOLH1,LOC440040	dist=155374;dist=194484	NA	NA	ncRNA_intronic	ENSG00000255532	NA	NA	NA	Score=610;Name=lod=402	NA	11p11.12	NA	NA	NA	NA	rs10839269	0.48	0.48	0.419	0.45008	0.5666	0.5496	0.6153	0.171	0.4877	0.58	0.54	0.62	0.16	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.727816	NA	NA	NA	NA	NA	0.377	NA	4.4334
1209	4	7714490	7714490	T	C	exonic	SORCS2	NA	synonymous SNV	SORCS2:NM_020777:exon15:c.T1899C:p.D633D	exonic	ENSG00000184985	NA	synonymous SNV	ENSG00000184985:ENST00000329016:exon15:c.T1383C:p.D461D,ENSG00000184985:ENST00000507866:exon15:c.T1899C:p.D633D	Score=589;Name=lod=329	NA	4p16.1	NA	NA	NA	NA	rs4689833	0.82	0.82	0.817	0.846046	0.7266	0.999	0.7997	0.7867	0.9243	0.73	1	0.78	0.78	0.7929	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.049713	NA	NA	0.713997	0.807389	NA	0.826	NA	4.4331696
1209	17	37190141	37190141	T	C	ncRNA_intronic	LRRC37A11P	NA	NA	NA	ncRNA_intronic	ENSG00000214553	NA	NA	NA	NA	NA	17q12	NA	NA	NA	NA	rs9914342	0.22	0.22	0.214	0.239617	0.2336	0.0615	0.2089	0.3646	0.2822	0.23	0.06	0.22	0.36	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.562962	NA	NA	NA	NA	NA	0.326	NA	4.4330666
1209	19	51359497	51359497	T	C	exonic	KLK3	NA	synonymous SNV	KLK3:NM_001030047:exon2:c.T48C:p.G16G,KLK3:NM_001030048:exon2:c.T48C:p.G16G,KLK3:NM_001648:exon2:c.T48C:p.G16G	exonic;splicing	ENSG00000142515;ENSG00000142515	ENST00000601503:exon2:c.60+2T>C	synonymous SNV	ENSG00000142515:ENST00000326003:exon2:c.T48C:p.G16G,ENSG00000142515:ENST00000360617:exon2:c.T48C:p.G16G,ENSG00000142515:ENST00000422986:exon2:c.T48C:p.G16G,ENSG00000142515:ENST00000593997:exon2:c.T48C:p.G16G,ENSG00000142515:ENST00000595392:exon2:c.T48C:p.G16G,ENSG00000142515:ENST00000595952:exon2:c.T48C:p.G16G,ENSG00000142515:ENST00000597483:exon2:c.T48C:p.G16G	NA	NA	19q13.33	NA	NA	NA	NA	rs11573	0.4	0.4	0.347	0.339856	0.4195	0.4851	0.4914	0.1921	0.2004	0.42	0.49	0.49	0.19	0.3972	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.170683	NA	NA	0.417326	0.241943	NA	0.348	NA	4.4326406
1209	5	178413816	178413816	T	C	intronic	GRM6	NA	NA	NA	ncRNA_intronic	ENSG00000254035	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs2256966	0.58	0.58	0.533	0.544529	0.6451	0.5913	0.6182	0.3941	0.544	0.65	0.6	0.59	0.45	0.6064	0.65	0.06	T	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.968	T	0.000	T	.	-1.044	0.202	-1.04	-0.397	-0.457	1.355	-1.043663	NA	0.05	0.649221	0.435769	NA	0.58	CLINSIG=untested;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000086027.1;CLNDSDB=.;CLNDSDBID=.	4.4326123
1209	12	27234200	27234200	T	C	exonic	C12orf71	NA	synonymous SNV	C12orf71:NM_001080406:exon2:c.A717G:p.K239K	exonic	ENSG00000214700	NA	synonymous SNV	ENSG00000214700:ENST00000429849:exon2:c.A717G:p.K239K	NA	NA	12p11.23	NA	NA	NA	NA	rs708165	0.24	0.24	0.207	0.20028	0.4433	0.0357	0.2176	0.1316	0.2004	0.45	0.04	0.23	0.14	0.3452	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.288429	NA	NA	0.44576	0.179623	NA	0.225	NA	4.4324066
1209	8	17944663	17944663	C	T	intergenic	ASAH1,NAT1	dist=2156;dist=83308	NA	NA	ncRNA_exonic	ENSG00000245281	NA	NA	NA	Score=497;Name=lod=140	NA	8p22	NA	NA	NA	NA	rs2010799	0.57	0.57	0.563	0.598243	0.5676	0.4871	0.5706	0.7201	0.5992	0.56	0.47	0.55	0.7	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.110763	NA	NA	NA	NA	NA	0.688	NA	4.4324
1209	1	94474452	94474452	T	G	intronic	ABCA4	NA	NA	NA	intronic	ENSG00000198691	NA	NA	NA	NA	NA	1p22.1	NA	NA	NA	NA	rs4147856	0.2	0.2	0.175	0.1877	0.1879	0.121	0.232	0.2685	0.1155	0.18	0.16	0.23	0.25	0.1885	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.561077	NA	NA	0.191279	0.237631	ID=COSN163162;OCCURENCE=1(breast)	0.203	CLINSIG=untested;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000085758.1;CLNDSDB=.;CLNDSDBID=.	4.432321
1209	1	152975763	152975763	C	A	exonic	SPRR3	NA	synonymous SNV	SPRR3:NM_001097589:exon2:c.C267A:p.G89G,SPRR3:NM_005416:exon3:c.C267A:p.G89G	exonic	ENSG00000163209	NA	synonymous SNV	ENSG00000163209:ENST00000542696:exon1:c.C267A:p.G89G,ENSG00000163209:ENST00000295367:exon2:c.C267A:p.G89G,ENSG00000163209:ENST00000331860:exon3:c.C267A:p.G89G,ENSG00000163209:ENST00000443178:exon3:c.C267A:p.G89G	NA	NA	1q21.3	NA	NA	NA	NA	rs1977734	0.51	0.51	0.467	0.524561	0.5318	0.6319	0.4323	0.5	0.5051	0.48	0.6	0.46	0.48	0.1596	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.165216	NA	NA	0.54315	0.524512	NA	NA	NA	4.4321166
1209	17	37186555	37186555	C	T	ncRNA_exonic	LRRC37A11P	NA	NA	NA	ncRNA_exonic	ENSG00000214553	NA	NA	NA	NA	NA	17q12	NA	NA	NA	NA	rs9893920	0.18	0.18	0.153	0.1877	0.2346	0.0655	0.1873	0.1589	0.3047	0.24	0.07	0.2	0.2	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.307465	NA	NA	NA	NA	NA	0.254	NA	4.4320666
1209	19	46202172	46202172	C	T	intronic	QPCTL	NA	NA	NA	intronic	ENSG00000011478	NA	NA	NA	NA	Name=Body mass index	19q13.32	NA	NA	NA	NA	rs2287019	0.17	0.17	0.142	0.153954	0.1968	0.1974	0.1153	0.121	0.137	0.19	0.2	0.14	0.12	0.1773	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.176445	NA	NA	0.194419	0.118021	NA	0.159	NA	4.431481
1209	3	27665791	27665791	A	C	intergenic	SLC4A7,EOMES	dist=139880;dist=92095	NA	NA	ncRNA_exonic	ENSG00000223968	NA	NA	NA	Score=668;Name=lod=692	NA	3p24.1	NA	NA	NA	NA	rs6551218	0.64	0.64	0.685	0.642372	0.5686	0.5615	0.5086	0.9039	0.5429	0.57	0.61	0.49	0.89	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.167326	NA	NA	NA	NA	NA	0.674	NA	4.4314
1209	4	70276753	70276753	G	A	intergenic	UGT2B28,UGT2B4	dist=115985;dist=69130	NA	NA	ncRNA_intronic	ENSG00000249956	NA	NA	NA	NA	NA	4q13.2	NA	Name=FOXA1_(SC-101058),FOXA1_(C-20)	NA	NA	rs4694728	0.5	0.5	0.45	0.498602	0.5686	0.4921	0.5144	0.4365	0.5061	0.57	0.48	0.5	0.42	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.77908	NA	NA	NA	NA	NA	0.116	NA	4.4314
1209	7	129990103	129990103	G	A	intronic	CPA5	NA	NA	NA	intronic	ENSG00000158525	NA	NA	NA	NA	NA	7q32.2	NA	NA	Name=69	NA	rs10247573	0.53	0.53	0.512	0.521965	0.5686	0.5516	0.6383	0.4198	0.499	0.58	0.53	0.61	0.38	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.272748	NA	NA	NA	NA	NA	0.391	NA	4.4314
1209	9	68414103	68414103	T	G	intergenic	ANKRD20A3,LOC642236	dist=443810;dist=13680	NA	NA	ncRNA_exonic	ENSG00000232815	NA	NA	NA	NA	NA	9q13	NA	NA	Name=129	NA	rs34380583	NA	NA	NA	0.624601	0.5686	0.7589	0.5403	0.6415	0.5808	NA	NA	NA	NA	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.785724	NA	NA	NA	NA	NA	0.638	NA	4.4314
1209	9	88990063	88990063	G	A	intergenic	ZCCHC6,GAS1	dist=20661;dist=569214	NA	NA	ncRNA_exonic	ENSG00000214908	NA	NA	NA	Score=802;Name=lod=2425	NA	9q21.33	NA	NA	NA	NA	rs1854949	0.47	0.47	0.487	0.441494	0.5686	0.4067	0.4784	0.3215	0.4826	0.59	0.46	0.42	0.31	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.542863	NA	NA	NA	NA	NA	0.522	NA	4.4314
1209	20	56139403	56139403	T	C	exonic	PCK1	NA	synonymous SNV	PCK1:NM_002591:exon7:c.T1140C:p.G380G	exonic	ENSG00000124253	NA	synonymous SNV	ENSG00000124253:ENST00000543666:exon3:c.T189C:p.G63G,ENSG00000124253:ENST00000535860:exon5:c.T744C:p.G248G,ENSG00000124253:ENST00000319441:exon7:c.T1140C:p.G380G	Score=313;Name=lod=25	NA	20q13.31	NA	NA	NA	NA	rs2070756	0.8	0.8	0.814	0.786941	0.7425	0.7728	0.7147	0.9554	0.6708	0.74	0.78	0.73	0.95	0.7547	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.927639	NA	NA	0.738721	0.926237	NA	0.812	NA	4.4307456
1209	2	100006620	100006620	G	T	intronic	EIF5B	NA	NA	NA	intronic	ENSG00000158417	NA	NA	NA	NA	NA	2q11.2	NA	NA	Name=6	NA	rs10187843	0.59	0.59	0.564	0.590056	0.5696	0.3671	0.7032	0.7602	0.5307	0.58	0.37	0.7	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.313981	NA	NA	NA	NA	NA	0.572	NA	4.4304
1209	11	3436095	3436095	G	A	intergenic	LOC650368,TRPC2	dist=5717;dist=211595	NA	NA	ncRNA_exonic	ENSG00000166492	NA	NA	NA	Score=289;Name=lod=20	NA	11p15.4	NA	NA	NA	NA	rs2412194	0.68	0.68	0.637	0.708466	0.5696	0.9603	0.7046	0.5946	0.7485	0.58	0.94	0.62	0.57	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.201374	NA	NA	NA	NA	NA	0.239	NA	4.4304
1209	11	50381417	50381417	T	C	intergenic	LOC646813,OR4A5	dist=1615;dist=1029961	NA	NA	ncRNA_exonic	ENSG00000214883	NA	NA	NA	Score=609;Name=lod=398	NA	11p11.12	NA	NA	NA	NA	rs2773517	0.51	0.51	0.491	0.500599	0.5696	0.5556	0.6297	0.3464	0.4898	0.57	0.55	0.64	0.27	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.100915	NA	NA	NA	NA	NA	0.507	NA	4.4304
1209	11	117074229	117074229	T	C	intronic	TAGLN	NA	NA	NA	intronic	ENSG00000149591	NA	NA	NA	NA	NA	11q23.3	NA	Name=Pol2	NA	NA	rs641620	0.36	0.36	0.344	0.403355	0.1521	0.5655	0.366	0.447	0.4622	0.16	0.56	0.32	0.47	0.2689	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.066683	2.066683	NA	0.149092	0.435484	NA	0.319	NA	4.429908
1209	9	100970881	100970881	A	G	intronic	TBC1D2	NA	NA	NA	intronic	ENSG00000095383	NA	NA	NA	NA	NA	9q22.33	NA	Name=ERalpha_a	NA	NA	rs10985441	0.61	0.61	0.625	0.603634	0.5706	0.498	0.5692	0.7761	0.5378	0.57	0.54	0.59	0.77	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.519636	NA	NA	NA	NA	NA	0.536	NA	4.4294
1209	6	161137779	161137779	T	C	exonic	PLG	NA	synonymous SNV	PLG:NM_000301:exon7:c.T771C:p.C257C	exonic	ENSG00000122194	NA	synonymous SNV	ENSG00000122194:ENST00000308192:exon7:c.T771C:p.C257C	NA	NA	6q26	NA	NA	NA	NA	rs14224	0.45	0.45	0.455	0.44988	0.3976	0.4563	0.3329	0.5537	0.4397	0.41	0.49	0.35	0.54	0.4217	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.715088	NA	NA	0.418023	0.522242	NA	0.377	NA	4.4293436
1209	15	22368905	22368905	G	A	exonic	OR4M2	NA	synonymous SNV	OR4M2:NM_001004719:exon1:c.G330A:p.S110S	exonic	ENSG00000182974	NA	synonymous SNV	ENSG00000182974:ENST00000332663:exon1:c.G330A:p.S110S	NA	NA	15q11.2	NA	NA	NA	NA	rs1835182	0.57	0.57	0.536	NA	NA	NA	NA	NA	NA	0.67	0.51	0.69	0.4	0.6097	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.177209	NA	NA	0.627907	0.393327	NA	0.536	NA	4.4290596
1209	3	111730546	111730546	G	A	intronic	TAGLN3	NA	NA	NA	intronic	ENSG00000144834	NA	NA	NA	NA	NA	3q13.2	NA	NA	Name=8	NA	rs3749310	0.42	0.42	0.414	0.384984	0.5716	0.3938	0.5274	0.115	0.4479	0.57	0.42	0.53	0.12	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.261136	NA	NA	NA	NA	NA	0.486	NA	4.4284
1209	20	33509523	33509523	C	T	intronic	ACSS2	NA	NA	NA	intronic	ENSG00000131069	NA	NA	NA	NA	NA	20q11.22	NA	NA	Name=10	NA	rs2273683	0.61	0.61	0.658	0.663339	0.5716	0.4345	0.4049	0.972	0.7597	0.59	0.42	0.47	0.96	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.889937	NA	NA	NA	NA	NA	0.775	NA	4.4284
1209	19	47658320	47658320	T	C	intronic	SAE1	NA	NA	NA	intronic	ENSG00000142230	NA	NA	NA	NA	NA	19q13.32	NA	NA	Name=3	NA	rs11666272	0.22	0.22	0.215	0.211462	0.1948	0.3671	0.2075	0.0968	0.226	0.19	0.4	0.17	0.09	0.1925	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.827507	NA	NA	0.18457	0.091661	ID=COSN165856;OCCURENCE=1(breast),1(lung)	0.145	NA	4.42813
1209	12	9315209	9315209	A	G	exonic	PZP	NA	synonymous SNV	PZP:NM_002864:exon22:c.T2772C:p.S924S	exonic	ENSG00000126838	NA	synonymous SNV	ENSG00000126838:ENST00000381997:exon17:c.T2130C:p.S710S,ENSG00000126838:ENST00000261336:exon22:c.T2772C:p.S924S	NA	NA	12p13.31	NA	NA	NA	NA	rs10771381	0.39	0.39	0.397	0.40655	0.3966	0.4226	0.366	0.3933	0.4468	0.39	0.43	0.38	0.38	0.412	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.758511	NA	NA	0.43	0.424421	NA	0.377	NA	4.4280666
1209	22	17309881	17309881	A	G	ncRNA_exonic	HSFY1P1	NA	NA	NA	ncRNA_exonic	ENSG00000229027	NA	NA	NA	NA	NA	22q11.1	NA	NA	NA	NA	rs16981741	0.17	0.17	0.156	0.172923	0.2386	0.2569	0.1643	0.0121	0.2423	0.22	0.25	0.14	0.01	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.067218	NA	NA	NA	NA	NA	0.217	NA	4.4280666
1209	5	79030045	79030045	A	G	exonic	CMYA5	NA	synonymous SNV	CMYA5:NM_153610:exon2:c.A5457G:p.V1819V	exonic	ENSG00000164309	NA	synonymous SNV	ENSG00000164309:ENST00000446378:exon2:c.A5457G:p.V1819V	NA	NA	5q14.1	NA	NA	NA	NA	rs4639193	0.58	0.58	0.611	0.584265	0.3917	0.6468	0.4193	0.885	0.4284	0.39	0.67	0.42	0.9	0.4525	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.718368	NA	NA	0.394505	0.812263	NA	0.652	NA	4.4279616
1209	22	23247082	23247082	C	G	intergenic	IGLL5,RTDR1	dist=9069;dist=154511	NA	NA	exonic	ENSG00000211678	NA	nonsynonymous SNV	ENSG00000211678:ENST00000390324:exon1:c.C28G:p.P10A	NA	NA	22q11.22	NA	NA	NA	NA	rs2009433	NA	NA	0.308	0.287939	0.173	0.498	0.3242	0.1997	0.2832	NA	NA	NA	NA	0.2328	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.118082	NA	NA	NA	NA	NA	NA	NA	4.4275334
1209	3	155830283	155830283	T	C	intergenic	GMPS,KCNAB1	dist=174763;dist=8054	NA	NA	ncRNA_exonic	ENSG00000242537	NA	NA	NA	Score=616;Name=lod=425	NA	3q25.31	NA	NA	NA	NA	rs7619529	0.54	0.54	0.479	0.488219	0.5726	0.7083	0.7061	0.1467	0.4816	0.57	0.72	0.67	0.17	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.705547	1.705547	NA	NA	NA	NA	0.522	NA	4.4274
1209	3	155830631	155830631	C	T	intergenic	GMPS,KCNAB1	dist=175111;dist=7706	NA	NA	ncRNA_exonic	ENSG00000242537	NA	NA	NA	Score=626;Name=lod=467	NA	3q25.31	NA	NA	NA	NA	rs9873706	0.53	0.53	0.468	0.478035	0.5726	0.7083	0.7061	0.1089	0.4806	0.57	0.72	0.67	0.13	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.55526	NA	NA	NA	NA	NA	0.507	NA	4.4274
1209	7	2749169	2749169	T	C	intronic	AMZ1	NA	NA	NA	intronic	ENSG00000174945	NA	NA	NA	NA	NA	7p22.3	NA	Name=USF2,USF-1	NA	NA	rs4721977	0.58	0.58	0.396	0.608027	0.5726	0.8214	0.6499	0.3419	0.7546	0.56	0.8	0.59	0.34	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.041115	NA	NA	NA	NA	NA	0.116	NA	4.4274
1209	21	32435334	32435334	T	C	intergenic	KRTAP19-8,TIAM1	dist=24539;dist=55402	NA	NA	ncRNA_exonic	ENSG00000228941	NA	NA	NA	Score=845;Name=lod=3636	NA	21q22.11	NA	NA	NA	NA	rs11088156	0.35	0.35	0.322	0.352037	0.5726	0.2202	0.3473	0.1649	0.5174	0.59	0.21	0.37	0.15	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.363118	NA	NA	NA	NA	NA	0.304	NA	4.4274
1209	22	35899384	35899384	C	T	intergenic	MCM5,RASD2	dist=78889;dist=37968	NA	NA	ncRNA_intronic	ENSG00000233388	NA	NA	NA	Score=549;Name=lod=227	NA	22q12.3	NA	NA	NA	NA	rs909704	0.62	0.62	0.65	0.630192	0.5726	0.497	0.5187	0.9054	0.5337	0.57	0.52	0.54	0.89	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.122515	NA	NA	NA	NA	NA	0.623	NA	4.4274
1209	6	25726774	25726774	A	C	UTR5	HIST1H2AA	NM_170745:c.-19T>G	NA	NA	UTR5	ENSG00000164508	ENST00000297012:c.-19T>G	NA	NA	NA	NA	6p22.2	NA	Name=HEY1,NF-YB,Pol2-4H8,Pol2(b),E2F6_(H-50),NF-YA	NA	NA	rs4711095	0.38	0.38	0.314	0.347045	0.2922	0.6825	0.4366	0.0976	0.3313	0.29	0.73	0.4	0.1	0.3362	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.593747	NA	NA	0.277791	0.137313	NA	0.283	NA	4.4271424
1209	19	43352340	43352340	T	G	ncRNA_intronic	PSG10P	NA	NA	NA	ncRNA_exonic	ENSG00000248257	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs8108570	0.37	0.37	0.339	0.420927	0.2396	0.4048	0.4193	0.5151	0.498	0.25	0.38	0.36	0.53	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.720517	NA	NA	NA	NA	NA	0.442	NA	4.4270666
1209	19	43358505	43358505	G	A	ncRNA_intronic	PSG10P	NA	NA	NA	ncRNA_intronic	ENSG00000248257	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs10408568	NA	NA	0.287	0.420327	0.2396	0.4048	0.4193	0.5151	0.4949	NA	NA	NA	NA	NA	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.859444	NA	NA	NA	NA	NA	0.159	NA	4.4270666
1209	10	15029264	15029264	A	G	intergenic	MEIG1,OLAH	dist=14414;dist=56631	NA	NA	ncRNA_exonic	ENSG00000235623	NA	NA	NA	Score=452;Name=lod=92	NA	10p13	NA	NA	NA	NA	rs7918583	0.65	0.65	0.629	0.717452	0.5736	0.748	0.5605	0.9448	0.638	0.53	0.67	0.52	0.91	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.361522	NA	NA	NA	NA	NA	0.587	NA	4.4264
1209	21	32432972	32432972	A	T	intergenic	KRTAP19-8,TIAM1	dist=22177;dist=57764	NA	NA	ncRNA_exonic	ENSG00000228941	NA	NA	NA	Score=790;Name=lod=2163	NA	21q22.11	NA	NA	NA	NA	rs2833246	0.36	0.36	0.308	0.352236	0.5736	0.2202	0.3487	0.1649	0.5164	0.59	0.21	0.37	0.16	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.343991	NA	NA	NA	NA	NA	0.304	NA	4.4264
1209	21	32434300	32434300	T	C	intergenic	KRTAP19-8,TIAM1	dist=23505;dist=56436	NA	NA	ncRNA_exonic	ENSG00000228941	NA	NA	NA	Score=845;Name=lod=3636	NA	21q22.11	NA	NA	NA	NA	rs1888445	0.36	0.36	0.314	0.351637	0.5736	0.2202	0.3487	0.1626	0.5164	0.59	0.21	0.37	0.16	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.042715	2.042715	NA	NA	NA	NA	0.304	NA	4.4264
1209	13	25525481	25525481	G	A	ncRNA_intronic	TPTE2P1	NA	NA	NA	ncRNA_intronic	ENSG00000253771	NA	NA	NA	NA	NA	13q12.13	NA	NA	NA	NA	rs56247049	0.18	0.18	0.15	0.223842	0.2406	0.0853	0.1527	0.2428	0.3742	0.21	0.09	0.18	0.23	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.060923	NA	NA	NA	NA	NA	0.174	NA	4.4260666
1209	19	43349294	43349294	A	G	ncRNA_exonic	PSG10P	NA	NA	NA	ncRNA_exonic	ENSG00000248257	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs2074591	0.33	0.33	0.234	0.422724	0.2406	0.4067	0.4092	0.528	0.4939	0.2	0.37	0.32	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.102104	NA	NA	NA	NA	NA	0.362	NA	4.4260666
1209	17	77923478	77923478	G	A	intronic	TBC1D16	NA	NA	NA	intronic	ENSG00000167291	NA	NA	NA	NA	NA	17q25.3	NA	NA	Name=7	NA	rs894858	0.24	0.24	0.225	0.257987	0.1938	0.4891	0.1311	0.1241	0.3569	0.2	0.47	0.14	0.11	0.2198	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.82725	NA	NA	0.160917	0.110075	NA	0.188	NA	4.425483
1209	14	68773298	68773298	C	G	intronic	RAD51B	NA	NA	NA	intronic	ENSG00000182185	NA	NA	NA	NA	NA	14q24.1	NA	Name=MEF2A,Pol2,PU.1,EBF,PAX5-C20,NFKB,TBP	NA	NA	rs60593979	NA	NA	NA	0.441494	0.5746	0.4484	0.598	0.1127	0.6309	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.043675	NA	NA	NA	NA	NA	NA	NA	4.4254
1209	19	22235491	22235491	T	G	intronic	ZNF257	NA	NA	NA	intronic	ENSG00000197134	NA	NA	NA	NA	NA	19p12	NA	Name=Pol2	NA	NA	rs387343	0.56	0.56	0.528	0.498003	0.5746	0.5456	0.6297	0.4592	0.3292	0.59	0.58	0.57	0.48	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.304568	NA	NA	NA	NA	NA	0.536	NA	4.4254
1209	19	22235577	22235577	C	T	intronic	ZNF257	NA	NA	NA	intronic	ENSG00000197134	NA	NA	NA	NA	NA	19p12	NA	Name=YY1	NA	NA	rs408312	0.56	0.56	0.53	0.493411	0.5746	0.5456	0.6268	0.4433	0.3292	0.59	0.58	0.57	0.47	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.00721	NA	NA	NA	NA	NA	0.529	NA	4.4254
1209	7	44081569	44081569	G	C	ncRNA_intronic	FLJ35390	NA	NA	NA	ncRNA_exonic	ENSG00000235314	NA	NA	NA	NA	NA	7p13	NA	NA	NA	NA	rs10254823	0.24	0.24	0.212	0.240016	0.2416	0.1141	0.2767	0.348	0.1963	0.25	0.12	0.28	0.32	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.802592	NA	NA	NA	NA	NA	0.225	NA	4.4250666
1210	16	20328685	20328685	T	C	exonic	GP2	NA	synonymous SNV	GP2:NM_001007242:exon7:c.A825G:p.Q275Q,GP2:NM_001007241:exon8:c.A834G:p.Q278Q,GP2:NM_001502:exon8:c.A1266G:p.Q422Q,GP2:NM_001007240:exon9:c.A1275G:p.Q425Q	exonic	ENSG00000169347	NA	synonymous SNV	ENSG00000169347:ENST00000341642:exon7:c.A825G:p.Q275Q,ENSG00000169347:ENST00000302555:exon8:c.A1266G:p.Q422Q,ENSG00000169347:ENST00000381360:exon8:c.A834G:p.Q278Q,ENSG00000169347:ENST00000381362:exon9:c.A1275G:p.Q425Q	NA	NA	16p12.3	NA	NA	NA	NA	rs1129818	0.24	0.24	0.222	0.238419	0.4364	0.1071	0.3012	0.0522	0.3773	0.43	0.1	0.3	0.06	0.3661	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.437886	NA	NA	0.439302	0.126419	NA	0.246	NA	4.4248646
1210	17	25739737	25739737	G	A	intergenic	WSB1,TBC1D3P5	dist=99092;dist=5294	NA	NA	ncRNA_exonic	ENSG00000266356	NA	NA	NA	Score=539;Name=lod=207	NA	17q11.1	NA	NA	NA	NA	rs11652073	0.56	0.56	0.566	0.532548	0.5755	0.6776	0.464	0.4448	0.5061	0.58	0.67	0.47	0.47	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.408636	NA	NA	NA	NA	NA	0.536	NA	4.4245
1210	18	8413903	8413903	G	A	intergenic	PTPRM,RAB12	dist=7044;dist=195540	NA	NA	ncRNA_exonic	ENSG00000266613	NA	NA	NA	Score=813;Name=lod=2697	NA	18p11.23	NA	NA	NA	NA	rs602212	0.51	0.51	0.515	0.483427	0.5755	0.4464	0.5058	0.466	0.4346	0.58	0.44	0.54	0.47	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.003739	NA	NA	NA	NA	NA	0.616	NA	4.4245
1210	6	30229583	30229583	G	C	ncRNA_intronic	HCG17,HLA-L	NA	NA	NA	ncRNA_intronic	ENSG00000243753,ENSG00000270604	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs2023476	0.32	0.32	0.265	0.373802	0.2425	0.5308	0.4308	0.2231	0.5102	0.22	0.48	0.39	0.22	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.627684	NA	NA	NA	NA	NA	0.341	NA	4.4241666
1210	10	99358511	99358511	A	G	intronic	HOGA1	NA	NA	NA	intronic	ENSG00000155252,ENSG00000241935,ENSG00000249967	NA	NA	NA	NA	NA	10q24.2	NA	NA	Name=6	NA	rs11817730	0.16	0.16	0.149	0.173323	0.1879	0.125	0.2017	0.1914	0.1636	0.19	0.12	0.16	0.19	0.1877	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.584054	NA	NA	0.200349	0.206764	ID=COSN163726;OCCURENCE=1(breast)	0.08	NA	4.424051
1210	19	39233146	39233146	A	G	exonic	CAPN12	NA	synonymous SNV	CAPN12:NM_144691:exon3:c.T330C:p.A110A	exonic	ENSG00000182472	NA	synonymous SNV	ENSG00000182472:ENST00000328867:exon3:c.T330C:p.A110A,ENSG00000182472:ENST00000598684:exon3:c.T309C:p.A103A	Score=516;Name=lod=167	NA	19q13.2	NA	NA	NA	NA	rs936524	0.67	0.67	0.663	0.671126	0.7694	0.623	0.6196	0.5386	0.8354	0.77	0.64	0.66	0.56	0.7278	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.276571	1.276571	NA	0.745698	0.543577	NA	0.71	NA	4.4237686
1210	1	118242864	118242864	A	G	intergenic	FAM46C,GDAP2	dist=71853;dist=163243	NA	NA	ncRNA_exonic	ENSG00000270719	NA	NA	NA	NA	NA	1p12	NA	Name=CEBPB	NA	NA	rs1891556	0.57	0.57	0.55	0.563698	0.5765	0.5813	0.6585	0.4826	0.5746	0.56	0.6	0.64	0.49	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.005391	NA	NA	NA	NA	NA	0.384	NA	4.4235
1210	2	242662761	242662761	T	C	intronic	ING5	NA	NA	NA	intronic	ENSG00000168395	NA	NA	NA	NA	NA	2q37.3	NA	Name=KAP1	NA	NA	rs7572153	0.7	0.7	0.709	0.750799	0.5765	0.8125	0.5447	0.8812	0.8364	0.57	0.82	0.57	0.87	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.583956	NA	NA	NA	NA	NA	0.725	NA	4.4235
1210	7	83740015	83740015	T	C	intronic	SEMA3A	NA	NA	NA	intronic	ENSG00000075213	NA	NA	NA	NA	NA	7q21.11	NA	NA	Name=9	NA	rs1990045	0.51	0.51	0.5	0.479633	0.5765	0.6855	0.5591	0.236	0.4407	0.56	0.68	0.54	0.24	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.117749	NA	NA	NA	NA	NA	0.355	NA	4.4235
1210	10	70962381	70962381	C	G	intronic	SUPV3L1	NA	NA	NA	intronic	ENSG00000156502	NA	NA	NA	NA	NA	10q22.1	NA	Name=USF2,CEBPB,EBF,NFKB,p300_(N-15)	NA	NA	rs2279928	0.43	0.43	0.42	0.390775	0.5765	0.3849	0.4481	0.1505	0.4898	0.57	0.44	0.48	0.18	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.365052	NA	NA	NA	NA	NA	0.457	NA	4.4235
1210	19	53707289	53707289	C	T	intergenic	ZNF665,ZNF818P	dist=10670;dist=8912	NA	NA	ncRNA_exonic	ENSG00000269051	NA	NA	NA	Score=358;Name=lod=38	NA	19q13.42	NA	NA	NA	NA	rs7249771	0.59	0.59	0.586	0.605232	0.5765	0.7817	0.5922	0.3714	0.7781	0.57	0.77	0.56	0.43	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.147687	NA	NA	NA	NA	NA	0.594	NA	4.4235
1210	10	96998458	96998458	C	T	intronic	PDLIM1	NA	NA	NA	intronic	ENSG00000107438	NA	NA	NA	Score=284;Name=lod=19	NA	10q23.33	NA	NA	NA	NA	rs2901832	0.12	0.12	0.104	0.101038	0.2147	0.0188	0.183	0.0454	0.0859	0.2	0.02	0.2	0.05	0.1579	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.153296	2.153296	NA	0.203953	0.058557	NA	0.123	NA	4.423447
1210	20	61980991	61980991	T	C	intronic	CHRNA4	NA	NA	NA	intronic	ENSG00000101204	NA	NA	NA	NA	NA	20q13.33	NA	NA	NA	NA	rs3827020	0.25	0.25	0.196	0.244609	0.1899	0.4841	0.2334	0.1717	0.1605	0.19	0.44	0.21	0.15	0.2114	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.512984	NA	NA	0.17543	0.169542	NA	0.239	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000079315.1;CLNDSDB=.;CLNDSDBID=.	4.42327
1210	19	36351768	36351768	G	A	intronic	KIRREL2	NA	NA	NA	intronic	ENSG00000126259	NA	NA	NA	NA	NA	19q13.12	NA	Name=USF-1	NA	NA	rs60849332	0.11	0.11	0.113	0.129393	0.2058	0.002	0.1196	0.0885	0.2444	0.2	NA	0.13	0.09	0.1771	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.335238	NA	NA	0.193978	0.109282	NA	0.051	NA	4.423122
1210	5	5200281	5200281	C	T	exonic	ADAMTS16	NA	synonymous SNV	ADAMTS16:NM_139056:exon9:c.C1350T:p.C450C	exonic	ENSG00000145536	NA	synonymous SNV	ENSG00000145536:ENST00000274181:exon9:c.C1350T:p.C450C,ENSG00000145536:ENST00000511368:exon9:c.C1350T:p.C450C	Score=391;Name=lod=52	NA	5p15.32	NA	NA	NA	NA	rs6555335	0.73	0.73	0.711	0.72524	0.7396	0.8026	0.8314	0.5651	0.772	0.74	0.84	0.79	0.57	0.7563	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.670573	NA	NA	0.747719	0.614541	NA	0.833	NA	4.4230476
1210	4	47887536	47887536	T	C	exonic	NFXL1	NA	synonymous SNV	NFXL1:NM_152995:exon14:c.A1803G:p.A601A	exonic	ENSG00000170448	NA	synonymous SNV	ENSG00000170448:ENST00000329043:exon14:c.A1803G:p.A601A,ENSG00000170448:ENST00000381538:exon14:c.A1803G:p.A601A,ENSG00000170448:ENST00000464756:exon14:c.A1803G:p.A601A,ENSG00000170448:ENST00000507489:exon14:c.A1803G:p.A601A	Score=611;Name=lod=404	NA	4p12	NA	NA	NA	NA	rs2053404	0.73	0.73	0.708	0.716853	0.7505	0.6875	0.7478	0.6558	0.773	0.77	0.72	0.75	0.65	0.7441	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.175691	NA	NA	0.749186	0.682932	NA	0.768	NA	4.4228806
1210	6	36185681	36185681	G	C	intronic	BRPF3	NA	NA	NA	intronic	ENSG00000096070	NA	NA	NA	Score=580;Name=lod=304	NA	6p21.31	NA	NA	NA	NA	rs12525283	0.11	0.11	0.09	0.13099	0.1849	0.0536	0.1844	0.0136	0.2761	0.19	0.04	0.17	0.02	0.1875	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.496058	1.496058	NA	0.205	0.046754	NA	0.101	NA	4.4226
1210	15	20456740	20456740	A	G	intergenic	NONE,CHEK2P2	dist=NONE;dist=31257	NA	NA	ncRNA_exonic	ENSG00000258628	NA	NA	NA	Score=574;Name=lod=287	NA	15q11.1	NA	NA	NA	NA	rs2954579	NA	NA	0.514	0.558307	0.5775	0.5496	0.5447	0.5492	0.5695	NA	NA	NA	NA	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.186619	NA	1	NA	NA	NA	0.094	NA	4.4225
1210	1	154744852	154744852	A	G	exonic	KCNN3	NA	synonymous SNV	KCNN3:NM_001204087:exon3:c.T1047C:p.N349N,KCNN3:NM_002249:exon3:c.T1047C:p.N349N,KCNN3:NM_170782:exon3:c.T132C:p.N44N	exonic	ENSG00000143603	NA	synonymous SNV	ENSG00000143603:ENST00000271915:exon3:c.T1047C:p.N349N,ENSG00000143603:ENST00000358505:exon3:c.T108C:p.N36N,ENSG00000143603:ENST00000361147:exon3:c.T132C:p.N44N	Score=407;Name=lod=60	NA	1q21.3	NA	NA	NA	NA	rs1131820	0.79	0.79	0.762	0.779153	0.7445	0.9831	0.8401	0.593	0.8129	0.74	0.99	0.81	0.61	0.7616	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.557229	NA	NA	0.738256	0.64049	NA	0.63	NA	4.4223106
1210	15	41813279	41813279	C	T	exonic	RPAP1	NA	synonymous SNV	RPAP1:NM_015540:exon22:c.G3105A:p.R1035R	exonic	ENSG00000103932	NA	synonymous SNV	ENSG00000103932:ENST00000304330:exon22:c.G3105A:p.R1035R,ENSG00000103932:ENST00000562303:exon22:c.G3105A:p.R1035R	NA	NA	15q15.1	NA	NA	NA	NA	rs3743031	0.31	0.31	0.294	0.298522	0.4324	0.2758	0.3285	0.1256	0.3967	0.43	0.31	0.33	0.13	0.3836	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.587815	NA	NA	0.428472	0.180209	ID=COSM433825;OCCURENCE=1(breast)	0.275	NA	4.4221946
1210	7	29690658	29690658	A	C	ncRNA_exonic	LOC646762	NA	NA	NA	ncRNA_intronic	ENSG00000225264,ENSG00000227855	NA	NA	NA	NA	NA	7p14.3	NA	NA	NA	NA	rs1728537	0.23	0.23	0.218	0.252396	0.2445	0.0694	0.2968	0.4107	0.2035	0.23	0.06	0.27	0.38	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.604627	NA	NA	NA	NA	NA	0.399	NA	4.4221666
1210	19	55222100	55222100	C	T	ncRNA_exonic	LILRP2	NA	NA	NA	ncRNA_exonic	ENSG00000170858,ENSG00000240258	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs7245810	0.21	0.21	0.224	0.288738	0.2445	0.0764	0.2147	0.5318	0.2771	0.19	0.09	0.24	0.38	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.621007	NA	NA	NA	NA	NA	NA	NA	4.4221666
1210	19	55222101	55222101	C	T	ncRNA_exonic	LILRP2	NA	NA	NA	ncRNA_exonic	ENSG00000170858,ENSG00000240258	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs34539630	0.21	0.21	0.227	0.288738	0.2445	0.0764	0.2147	0.5318	0.2771	0.19	0.09	0.24	0.38	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.729734	NA	NA	NA	NA	NA	NA	NA	4.4221666
1210	19	50796905	50796905	G	A	exonic	MYH14	NA	synonymous SNV	MYH14:NM_024729:exon37:c.G5307A:p.S1769S,MYH14:NM_001077186:exon38:c.G5331A:p.S1777S,MYH14:NM_001145809:exon39:c.G5430A:p.S1810S	exonic	ENSG00000105357	NA	synonymous SNV	ENSG00000105357:ENST00000596571:exon36:c.G5307A:p.S1769S,ENSG00000105357:ENST00000262269:exon38:c.G5430A:p.S1810S,ENSG00000105357:ENST00000376970:exon38:c.G5406A:p.S1802S,ENSG00000105357:ENST00000425460:exon38:c.G5331A:p.S1777S,ENSG00000105357:ENST00000598205:exon38:c.G5331A:p.S1777S,ENSG00000105357:ENST00000440075:exon39:c.G5430A:p.S1810S,ENSG00000105357:ENST00000601313:exon39:c.G5430A:p.S1810S	NA	NA	19q13.33	NA	NA	NA	NA	rs3745509	0.71	0.71	0.677	0.682109	0.7545	0.9276	0.7709	0.3306	0.7669	0.76	0.92	0.75	0.35	0.748	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.543998	NA	NA	0.742202	0.364507	NA	0.572	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000037051.1;CLNDSDB=.;CLNDSDBID=.	4.4219646
1210	1	8395441	8395441	T	C	intronic	SLC45A1	NA	NA	NA	intronic	ENSG00000162426	NA	NA	NA	NA	Name=Breast cancer	1p36.23	NA	NA	NA	NA	rs2305016	0.42	0.42	0.407	0.378195	0.5785	0.2857	0.3977	0.2761	0.3916	0.59	0.29	0.43	0.29	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.719914	NA	NA	NA	NA	NA	0.493	NA	4.4215
1210	1	81564282	81564282	A	T	intergenic	NONE,LPHN2	dist=NONE;dist=701800	NA	NA	ncRNA_exonic	ENSG00000229752	NA	NA	NA	Score=756;Name=lod=1575	NA	1p31.1	NA	NA	NA	NA	rs545095	0.6	0.6	0.609	0.636981	0.5785	0.4653	0.6282	0.8116	0.6442	0.58	0.46	0.6	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.052655	NA	NA	NA	NA	NA	0.804	NA	4.4215
1210	8	121292407	121292407	G	A	intronic	COL14A1	NA	NA	NA	intronic	ENSG00000187955	NA	NA	NA	NA	NA	8q24.12	NA	Name=FOXA1_(C-20)	NA	NA	rs1869831	0.64	0.64	0.65	0.653954	0.5785	0.5794	0.598	0.8797	0.5429	0.57	0.59	0.62	0.85	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.927421	NA	NA	NA	NA	NA	0.58	NA	4.4215
1210	22	36541725	36541725	G	T	intronic	APOL3	NA	NA	NA	intronic	ENSG00000128284	NA	NA	NA	NA	NA	22q12.3	NA	NA	Name=3	NA	rs1807672	0.46	0.46	0.494	0.472644	0.5785	0.1607	0.3718	0.7065	0.4407	0.59	0.14	0.4	0.67	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.436868	NA	NA	NA	NA	NA	0.645	NA	4.4215
1210	19	52004795	52004795	G	T	exonic	SIGLEC12	NA	synonymous SNV	SIGLEC12:NM_053003:exon1:c.C193A:p.R65R	exonic	ENSG00000254521	NA	synonymous SNV	ENSG00000254521:ENST00000291707:exon1:c.C193A:p.R65R,ENSG00000254521:ENST00000596742:exon1:c.C193A:p.R65R	NA	NA	19q13.41	NA	NA	NA	NA	rs61742108	NA	NA	NA	0.569688	0.6322	0.369	0.7248	0.5522	0.6258	NA	NA	NA	NA	0.6131	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.056493	NA	NA	NA	NA	NA	NA	NA	4.4213666
1210	1	197108427	197108427	A	G	intronic	ASPM	NA	NA	NA	ncRNA_exonic	ENSG00000235748	NA	NA	NA	Score=666;Name=lod=676	NA	1q31.3	NA	NA	NA	NA	rs1332662	0.81	0.81	0.769	0.771366	0.9125	1	0.8761	0.3389	0.9008	0.92	1	0.89	0.36	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.3319	NA	NA	NA	NA	NA	0.688	NA	4.4208333
1210	19	5277800	5277800	C	A	intronic	PTPRS	NA	NA	NA	ncRNA_exonic	ENSG00000239524	NA	NA	NA	Score=722;Name=lod=1144	NA	19p13.3	NA	NA	NA	NA	rs7250168	0.89	0.89	0.894	0.88139	0.9125	0.8294	0.9078	0.9418	0.8027	0.9	0.79	0.91	0.95	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.700062	NA	NA	NA	NA	NA	0.891	NA	4.4208333
1210	17	78071052	78071052	T	C	exonic	CCDC40	NA	synonymous SNV	CCDC40:NM_017950:exon19:c.T3030C:p.D1010D	exonic	ENSG00000141519	NA	synonymous SNV	ENSG00000141519:ENST00000397545:exon19:c.T3030C:p.D1010D	Score=243;Name=lod=13	NA	17q25.3	NA	NA	NA	NA	rs12952612	0.69	0.69	0.699	0.714257	0.7614	0.6567	0.5663	0.7088	0.8374	0.76	0.67	0.57	0.7	0.7331	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.288598	NA	NA	0.75144	0.70786	ID=COSM437721;OCCURENCE=1(breast)	0.71	NA	4.4207266
1210	6	64190067	64190067	C	A	intergenic	LGSN,PTP4A1	dist=160185;dist=91853	NA	NA	ncRNA_exonic	ENSG00000225121	NA	NA	NA	Score=514;Name=lod=164	NA	6q12	NA	NA	NA	NA	rs9443931	0.47	0.47	0.446	0.429113	0.5795	0.5476	0.4193	0.1868	0.4867	0.56	0.55	0.46	0.23	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.200377	2.200377	NA	NA	NA	NA	0.493	NA	4.4205
1210	7	138441124	138441124	A	G	intronic	ATP6V0A4	NA	NA	NA	intronic	ENSG00000105929	NA	NA	NA	NA	NA	7q34	NA	NA	Name=20	NA	rs296910	0.64	0.64	0.634	0.640375	0.5795	0.5625	0.6239	0.8548	0.5051	0.59	0.55	0.59	0.86	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.801997	NA	NA	NA	NA	NA	0.543	NA	4.4205
1210	8	6756521	6756521	T	C	intergenic	DEFB1,DEFA6	dist=20992;dist=25695	NA	NA	ncRNA_exonic	ENSG00000250752	NA	NA	NA	Score=659;Name=lod=635	NA	8p23.1	NA	NA	NA	NA	rs2980959	0.44	0.44	0.425	0.394569	0.5795	0.4921	0.4337	0.1528	0.4029	0.57	0.51	0.45	0.15	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.469721	NA	NA	NA	NA	NA	0.333	NA	4.4205
1210	8	6756577	6756577	A	G	intergenic	DEFB1,DEFA6	dist=21048;dist=25639	NA	NA	ncRNA_exonic	ENSG00000250752	NA	NA	NA	Score=659;Name=lod=635	NA	8p23.1	NA	NA	NA	NA	rs13275881	0.44	0.44	0.303	0.39377	0.5795	0.4911	0.4337	0.1505	0.4029	0.57	0.51	0.45	0.15	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.630502	NA	NA	NA	NA	NA	0.348	NA	4.4205
1210	8	6756582	6756582	G	C	intergenic	DEFB1,DEFA6	dist=21053;dist=25634	NA	NA	ncRNA_exonic	ENSG00000250752	NA	NA	NA	Score=659;Name=lod=635	NA	8p23.1	NA	NA	NA	NA	rs13272703	0.44	0.44	0.32	0.39377	0.5795	0.4911	0.4337	0.1505	0.4029	0.57	0.51	0.45	0.15	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.986464	NA	NA	NA	NA	NA	0.355	NA	4.4205
1210	8	6756770	6756770	T	C	intergenic	DEFB1,DEFA6	dist=21241;dist=25446	NA	NA	ncRNA_exonic	ENSG00000250752	NA	NA	NA	NA	NA	8p23.1	NA	Name=CTCF	NA	NA	rs13255719	0.44	0.44	0.512	0.395367	0.5795	0.4921	0.4366	0.1536	0.4039	0.57	0.51	0.45	0.15	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.068076	NA	NA	NA	NA	NA	0.326	NA	4.4205
1210	14	20678002	20678002	T	C	intergenic	OR11G2,OR11H6	dist=11470;dist=13867	NA	NA	ncRNA_exonic	ENSG00000258625	NA	NA	NA	NA	NA	14q11.2	Score=760;Name=V$PPARA_01	NA	NA	NA	rs8004680	0.58	0.58	0.557	0.595048	0.5795	0.5536	0.5432	0.6293	0.6442	0.59	0.55	0.52	0.66	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.643905	NA	NA	NA	NA	NA	0.565	NA	4.4205
1210	11	122665437	122665437	A	G	exonic	UBASH3B	NA	synonymous SNV	UBASH3B:NM_032873:exon7:c.A1008G:p.S336S	exonic	ENSG00000154127	NA	synonymous SNV	ENSG00000154127:ENST00000284273:exon7:c.A1008G:p.S336S	NA	NA	11q24.1	NA	NA	NA	NA	rs872414	0.52	0.52	0.512	0.5623	0.3917	0.5615	0.5317	0.7602	0.4928	0.37	0.52	0.5	0.74	0.4537	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.033313	NA	NA	0.400791	0.698683	NA	0.529	NA	4.4204756
1210	13	19999968	19999968	T	C	intronic	TPTE2	NA	NA	NA	exonic	ENSG00000132958	NA	synonymous SNV	ENSG00000132958:ENST00000462409:exon14:c.A915G:p.E305E	NA	NA	13q12.11	NA	NA	NA	NA	rs59951789	0.16	0.16	0.05	NA	NA	NA	NA	NA	NA	0.14	0.26	0.25	0.03	0.2476	0.26	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-1.006	T	0.000	T	.	-0.381	2.208	-0.809	-0.289	0.217	.	-0.381485	NA	NA	0.165499	0.047237	NA	0.043	NA	4.4202343
1210	6	30228879	30228879	C	T	ncRNA_intronic	HCG17,HLA-L	NA	NA	NA	ncRNA_intronic	ENSG00000243753,ENSG00000270604	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs2523749	0.32	0.32	0.239	0.397564	0.2465	0.5308	0.4496	0.3003	0.5102	0.21	0.45	0.38	0.28	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.164111	NA	NA	NA	NA	NA	NA	NA	4.4201666
1210	6	30228881	30228881	T	C	ncRNA_intronic	HCG17,HLA-L	NA	NA	NA	ncRNA_intronic	ENSG00000243753,ENSG00000270604	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs2523748	0.32	0.32	0.256	0.397564	0.2465	0.5308	0.4496	0.3003	0.5102	0.21	0.45	0.38	0.28	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.924503	NA	NA	NA	NA	NA	NA	NA	4.4201666
1210	6	30229990	30229990	G	A	ncRNA_intronic	HCG17,HLA-L	NA	NA	NA	ncRNA_intronic	ENSG00000243753,ENSG00000270604	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs2516702	0.34	0.34	0.296	0.397564	0.2465	0.5308	0.4496	0.3003	0.5102	0.22	0.48	0.4	0.3	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.556815	NA	NA	NA	NA	NA	0.384	NA	4.4201666
1210	5	99284934	99284934	G	C	intergenic	LOC100289230,LOC100133050	dist=1018221;dist=430275	NA	NA	ncRNA_exonic	ENSG00000250391	NA	NA	NA	Score=701;Name=lod=941	NA	5q21.1	NA	NA	NA	NA	rs899053	0.5	0.5	0.52	0.474641	0.5805	0.3403	0.4395	0.556	0.4192	0.58	0.37	0.48	0.56	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.75392	NA	NA	NA	NA	NA	0.688	NA	4.4195
1210	6	64190278	64190278	A	T	intergenic	LGSN,PTP4A1	dist=160396;dist=91642	NA	NA	ncRNA_exonic	ENSG00000225121	NA	NA	NA	Score=629;Name=lod=482	NA	6q12	NA	NA	NA	NA	rs2622276	0.53	0.53	0.544	0.513379	0.5805	0.5476	0.4409	0.4939	0.4867	0.56	0.55	0.48	0.49	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.129262	NA	NA	NA	NA	NA	0.623	NA	4.4195
1210	20	34457513	34457513	G	A	intronic	PHF20	NA	NA	NA	intronic	ENSG00000025293	NA	NA	NA	NA	NA	20q11.23	NA	NA	Name=9	NA	rs6121073	0.23	0.23	0.25	0.288139	0.1799	0.1845	0.1801	0.4281	0.3937	0.18	0.16	0.22	0.41	0.2199	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.138108	NA	NA	0.180814	0.388561	NA	0.217	NA	4.419386
1210	22	23077271	23077271	A	G	intergenic	GGTLC2,MIR650	dist=86903;dist=87999	NA	NA	exonic	ENSG00000211664	NA	synonymous SNV	ENSG00000211664:ENST00000390310:exon2:c.A48G:p.G16G	NA	NA	22q11.22	NA	NA	NA	NA	rs392011	0.01	0.01	0.012	0.00958466	0.0298	0.002	0.013	NA	0.0072	0.03	0.0035	0.02	NA	0.024	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.284475	NA	NA	0.02766	0.006757	NA	0.007	NA	4.41854
1210	7	56356744	56356744	G	T	intergenic	NUPR1L,LOC650226	dist=172654;dist=134653	NA	NA	ncRNA_exonic	ENSG00000223559	NA	NA	NA	Score=797;Name=lod=2309	NA	7p11.2	NA	NA	NA	NA	rs3813510	0.42	0.42	0.382	0.420527	0.5815	0.4702	0.4827	0.1241	0.5603	0.56	0.48	0.49	0.11	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.139598	NA	NA	NA	NA	NA	0.406	NA	4.4185
1210	7	56357799	56357799	A	G	intergenic	NUPR1L,LOC650226	dist=173709;dist=133598	NA	NA	ncRNA_exonic	ENSG00000223559	NA	NA	NA	Score=721;Name=lod=1135	NA	7p11.2	NA	NA	NA	NA	rs11770278	0.43	0.43	0.371	0.422724	0.5815	0.4712	0.4827	0.1316	0.5603	0.56	0.48	0.49	0.12	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.403029	NA	NA	NA	NA	NA	0.413	NA	4.4185
1210	16	2111779	2111779	T	C	intronic	TSC2	NA	NA	NA	intronic	ENSG00000103197	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs17135764	0.59	0.59	0.551	0.610623	0.5815	0.8155	0.6455	0.4092	0.6769	0.58	0.79	0.59	0.37	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.142614	NA	NA	NA	NA	NA	0.522	CLINSIG=untested;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000042398.2;CLNDSDB=.;CLNDSDBID=.	4.4185
1210	17	26034262	26034262	C	T	intergenic	LGALS9,NOS2	dist=57676;dist=49530	NA	NA	ncRNA_exonic	ENSG00000265833	NA	NA	NA	Score=549;Name=lod=227	NA	17q11.2	NA	NA	NA	NA	rs9904749	0.69	0.69	0.707	0.726238	0.5815	0.6776	0.6412	0.8336	0.8405	0.57	0.7	0.66	0.86	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.348635	1.348635	NA	NA	NA	NA	0.848	NA	4.4185
1210	1	183187494	183187494	T	C	intronic	LAMC2	NA	NA	NA	intronic	ENSG00000058085	NA	NA	NA	NA	NA	1q25.3	NA	NA	Name=19	NA	rs10911285	0.29	0.29	0.28	0.313898	0.1571	0.3333	0.3184	0.4024	0.3323	0.17	0.34	0.29	0.41	0.2481	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.324934	NA	NA	0.176669	0.378974	NA	0.232	NA	4.418131
1210	1	47118189	47118189	G	T	intronic	ATPAF1	NA	NA	NA	intronic	ENSG00000123472	NA	NA	NA	NA	NA	1p33	NA	NA	Name=3	NA	rs620431	0.54	0.54	0.519	0.538938	0.3141	0.7996	0.4654	0.6467	0.408	0.3	0.78	0.47	0.68	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.224854	NA	NA	0.268385	0.57659	NA	0.442	NA	4.417515
1210	2	133425912	133425912	C	T	intronic	LYPD1	NA	NA	NA	intronic	ENSG00000150551	NA	NA	NA	NA	NA	2q21.2	NA	NA	Name=48	NA	rs2709533	0.54	0.54	0.519	0.493211	0.5825	0.6528	0.4957	0.3207	0.4683	0.6	0.65	0.54	0.3	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.364641	NA	NA	NA	NA	NA	0.558	NA	4.4175
1210	18	9678977	9678977	C	T	intergenic	PPP4R1,RAB31	dist=64372;dist=29251	NA	NA	ncRNA_exonic	ENSG00000264644	NA	NA	NA	Score=642;Name=lod=540	NA	18p11.22	NA	NA	NA	NA	rs4121713	0.48	0.48	0.505	0.452676	0.5825	0.3641	0.3948	0.525	0.3538	0.58	0.35	0.42	0.5	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.099106	NA	NA	NA	NA	NA	0.616	NA	4.4175
1210	18	9679232	9679232	G	A	intergenic	PPP4R1,RAB31	dist=64627;dist=28996	NA	NA	ncRNA_exonic	ENSG00000264644	NA	NA	NA	Score=589;Name=lod=329	NA	18p11.22	NA	NA	NA	NA	rs11081491	0.47	0.47	0.498	0.450879	0.5825	0.3542	0.3963	0.525	0.3538	0.58	0.34	0.42	0.5	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.211109	NA	NA	NA	NA	NA	0.616	NA	4.4175
1210	3	186370454	186370454	C	T	UTR3	FETUB	NM_014375:c.*34C>T	NA	NA	ncRNA_UTR3	ENSG00000090512	NA	NA	NA	NA	NA	3q27.3	NA	NA	NA	NA	rs150042143	0.02	0.02	0.009	0.0121805	0.0278	NA	0.0303	0.0015	0.0102	0.02	NA	0.04	0.01	0.024	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.584834	NA	NA	0.030892	0.005692	NA	0.029	NA	4.417308
1210	10	12123667	12123667	A	C	intronic	DHTKD1	NA	NA	NA	intronic	ENSG00000181192	NA	NA	NA	NA	NA	10p14	NA	NA	Name=3	NA	rs1722445	0.28	0.28	0.258	0.273762	0.1829	0.2976	0.3098	0.4342	0.1002	0.19	0.3	0.28	0.38	0.2201	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.260621	NA	NA	0.179767	0.38266	NA	0.246	NA	4.417233
1210	3	47059323	47059323	C	T	intronic	SETD2	NA	NA	NA	intronic	ENSG00000181555	NA	NA	NA	NA	NA	3p21.31	NA	NA	Name=12	NA	rs2385867	0.56	0.56	0.535	0.551917	0.5835	0.5387	0.549	0.5257	0.5706	0.58	0.53	0.56	0.54	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.747117	NA	NA	NA	NA	ID=COSN166868;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.609	NA	4.4165
1210	15	20446043	20446043	T	A	intergenic	NONE,CHEK2P2	dist=NONE;dist=41954	NA	NA	ncRNA_exonic	ENSG00000258628	NA	NA	NA	NA	NA	15q11.1	NA	Name=ELF1_(SC-631)	NA	NA	rs1823751	NA	NA	0.387	0.592851	0.5835	0.627	0.5504	0.6135	0.5695	NA	NA	NA	NA	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.382767	NA	0.95	NA	NA	NA	0.428	NA	4.4165
1210	19	33700445	33700445	C	T	intronic	SLC7A10	NA	NA	NA	intronic	ENSG00000130876	NA	NA	NA	NA	NA	19q13.11	NA	Name=CTCF	NA	NA	rs2303093	0.33	0.33	0.296	0.284944	0.5835	0.129	0.2983	0.1467	0.316	0.58	0.11	0.35	0.18	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.221809	NA	NA	NA	NA	ID=COSN165784;OCCURENCE=1(NS)	0.391	NA	4.4165
1210	2	228119461	228119461	G	A	ncRNA_intronic	LOC654841	NA	NA	NA	ncRNA_intronic	ENSG00000236432	NA	NA	NA	NA	NA	2q36.3	NA	NA	NA	NA	rs35467545	0.1	0.1	0.071	0.102236	0.0736	0.1637	0.1787	0.028	0.1145	0.07	0.15	0.16	0.03	0.0939	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.35096	NA	NA	0.082948	0.03292	NA	0.051	NA	4.4162186
1210	15	43021563	43021563	G	A	intronic	CDAN1	NA	NA	NA	intronic	ENSG00000140326	NA	NA	NA	Score=484;Name=lod=124	NA	15q15.2	NA	NA	NA	NA	rs12905385	0.19	0.19	0.195	0.236222	0.1849	0.0387	0.1239	0.4153	0.3303	0.2	0.05	0.14	0.35	0.209	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.280108	NA	NA	0.190161	0.369723	NA	0.225	NA	4.415939
1210	6	29976262	29976262	C	T	ncRNA_intronic	HLA-J,ZNRD1-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000204622,ENSG00000204623	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs9261110	0.18	0.18	0.183	0.191294	0.0954	0.1905	0.1744	0.2988	0.1575	0.09	0.2	0.2	0.3	0.1554	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.35776	NA	NA	NA	NA	NA	0.167	NA	4.4158666
1210	2	89416764	89416764	A	T	intergenic	MIR4436A,NONE	dist=304796;dist=NONE	NA	NA	downstream	ENSG00000240382	NA	NA	NA	Score=289;Name=lod=20	NA	2p11.2	NA	NA	NA	NA	rs112835170	0.05	0.05	0.035	0.071885	0.0845	0.0069	0.0576	0.0915	0.1094	0.07	0.01	0.03	0.07	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.903836	2.903836	NA	NA	NA	NA	NA	NA	4.4155
1210	5	20304486	20304486	A	T	intergenic	CDH18,GUSBP1	dist=316133;dist=1155103	NA	NA	ncRNA_exonic	ENSG00000214132	NA	NA	NA	Score=689;Name=lod=838	NA	5p14.3	NA	NA	NA	NA	rs11747601	0.47	0.47	0.349	0.339257	0.5845	0.2153	0.4654	0.1233	0.4172	0.67	0.36	0.58	0.22	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.720479	NA	NA	NA	NA	NA	0.428	NA	4.4155
1210	1	55134487	55134487	G	A	ncRNA_intronic	HEATR8-TTC4	NA	NA	NA	intronic	ENSG00000184313,ENSG00000271723	NA	NA	NA	NA	NA	1p32.3	NA	Name=CTCF_(SC-5916),CTCF	NA	NA	rs478513	0.35	0.35	0.331	0.388379	0.2783	0.379	0.4784	0.3124	0.5501	0.28	0.38	0.45	0.36	0.3588	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.536262	NA	NA	0.281114	0.306888	NA	0.428	NA	4.4151193
1210	3	112710242	112710242	T	C	intronic	GTPBP8	NA	NA	NA	intronic	ENSG00000163607	NA	NA	NA	NA	NA	3q13.2	NA	Name=TBP,GTF2F1_(RAP-74),CHD2_(N-1250),TCF12,PAX5-N19,PAX5-C20,Oct-2,ELF1_(SC-631),AP-2gamma,ZEB1_(SC-25388),HA-E2F1,Pol2-4H8,Pol2,Ini1,POU2F2	NA	NA	rs2248029	0.15	0.15	0.12	0.14377	0.2913	0.0784	0.1916	0.0318	0.1769	0.29	0.05	0.17	0.04	0.2936	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.241227	NA	NA	NA	NA	NA	0.13	NA	4.4151
1211	7	159024638	159024638	G	A	intergenic	VIPR2,NONE	dist=86989;dist=NONE	NA	NA	ncRNA_intronic	ENSG00000229435	NA	NA	NA	Score=720;Name=lod=1127	NA	7q36.3	NA	NA	NA	NA	rs414322	0.61	0.61	0.58	0.598442	0.5855	0.7242	0.6657	0.4705	0.6074	0.59	0.73	0.65	0.49	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.483059	1.483059	NA	NA	NA	NA	0.652	NA	4.4145
1211	13	65884191	65884191	T	C	intergenic	OR7E156P,PCDH9	dist=1567490;dist=992775	NA	NA	ncRNA_exonic	ENSG00000214266	NA	NA	NA	Score=597;Name=lod=357	NA	13q21.32	NA	NA	NA	NA	rs892261	0.64	0.64	0.608	0.649361	0.5855	0.7728	0.5749	0.6407	0.6524	0.58	0.74	0.6	0.63	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.318903	1.318903	NA	NA	NA	NA	0.667	NA	4.4145
1211	17	70846027	70846027	G	A	intronic	SLC39A11	NA	NA	NA	intronic	ENSG00000133195	NA	NA	NA	Score=259;Name=lod=15	NA	17q24.3	NA	NA	NA	NA	rs4998297	0.46	0.46	0.439	0.455272	0.5855	0.3373	0.5101	0.413	0.4611	0.58	0.33	0.48	0.43	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.131905	2.131905	NA	NA	NA	NA	0.558	NA	4.4145
1211	19	49649051	49649051	T	G	intronic	PPFIA3	NA	NA	NA	intronic	ENSG00000177380	NA	NA	NA	NA	NA	19q13.33	NA	Name=JunD,c-Jun	NA	NA	rs3764625	0.58	0.58	0.569	0.59365	0.5855	0.245	0.5879	0.9017	0.5491	0.59	0.24	0.65	0.89	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.800732	NA	NA	NA	NA	NA	0.63	NA	4.4145
1211	4	10446906	10446906	A	G	exonic	ZNF518B	NA	synonymous SNV	ZNF518B:NM_053042:exon3:c.T1047C:p.D349D	exonic	ENSG00000178163	NA	synonymous SNV	ENSG00000178163:ENST00000326756:exon3:c.T1047C:p.D349D	NA	NA	4p16.1	Score=851;Name=V$PBX1_02	NA	NA	NA	rs10016022	0.79	0.79	0.801	0.801518	0.7575	0.7946	0.7248	0.8933	0.7843	0.76	0.79	0.77	0.88	0.7507	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.961409	NA	NA	0.74407	0.863595	NA	0.783	NA	4.4143966
1211	4	119115366	119115366	A	G	intronic	NDST3	NA	NA	NA	ncRNA_exonic	ENSG00000251463	NA	NA	NA	Score=454;Name=lod=93	NA	4q26	NA	NA	NA	NA	rs12505156	0.8	0.8	0.759	0.811901	0.9195	0.7976	0.9308	0.5688	0.9601	0.92	0.78	0.93	0.54	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.121124	NA	NA	NA	NA	NA	0.754	NA	4.4138333
1211	3	52491836	52491836	G	A	intronic	NISCH	NA	NA	NA	intronic	ENSG00000010322	NA	NA	NA	NA	NA	3p21.1	NA	NA	Name=3	NA	rs12629472	0.17	0.17	0.139	0.163938	0.2018	0.2956	0.1196	0.0174	0.2188	0.21	0.26	0.14	0.02	0.1921	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.575924	NA	NA	0.192791	0.046527	NA	0.21	NA	4.413309
1211	19	4475362	4475362	T	G	intronic	HDGFRP2	NA	NA	NA	intronic	ENSG00000167674	NA	NA	NA	NA	NA	19p13.3	Score=709;Name=V$BRACH_01	NA	NA	NA	rs2288932	0.16	0.16	0.162	0.176118	0.2147	0.0883	0.1499	0.1589	0.2689	0.22	0.09	0.14	0.15	0.1784	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.059872	NA	NA	0.193764	0.16606	NA	0.188	NA	4.413136
1211	4	6611813	6611813	T	C	intronic	MAN2B2	NA	NA	NA	intronic	ENSG00000013288	NA	NA	NA	NA	NA	4p16.1	NA	Name=CTCF	NA	NA	rs4689487	0.23	0.23	0.233	0.238219	0.1879	0.1438	0.2896	0.3601	0.1861	0.18	0.15	0.29	0.34	0.2076	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.684316	NA	NA	0.191395	0.333636	NA	0.275	NA	4.413105
1211	13	47469940	47469940	G	A	exonic	HTR2A	NA	synonymous SNV	HTR2A:NM_000621:exon2:c.C102T:p.S34S	exonic	ENSG00000102468	NA	synonymous SNV	ENSG00000102468:ENST00000378688:exon1:c.C102T:p.S34S,ENSG00000102468:ENST00000542664:exon2:c.C102T:p.S34S	NA	NA	13q14.2	NA	NA	NA	NA	rs6313	0.43	0.43	0.413	0.441294	0.4364	0.5883	0.3545	0.3926	0.4223	0.44	0.51	0.39	0.35	0.4071	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.835568	NA	NA	0.410116	0.382206	NA	0.478	NA	4.4130506
1211	22	39477123	39477123	T	C	exonic	APOBEC3G	NA	synonymous SNV	APOBEC3G:NM_021822:exon3:c.T357C:p.F119F	exonic	ENSG00000239713	NA	synonymous SNV	ENSG00000239713:ENST00000407997:exon3:c.T357C:p.F119F,ENSG00000239713:ENST00000452957:exon3:c.T357C:p.F119F	NA	NA	22q13.1	NA	NA	NA	NA	rs5757465	0.3	0.3	0.28	0.284545	0.4473	0.2242	0.3977	0.0287	0.4448	0.44	0.24	0.45	0.04	0.3717	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.385783	NA	NA	0.434767	0.088743	ID=COSM149298;OCCURENCE=1(stomach)	0.188	NA	4.4128996
1211	15	65041622	65041622	C	A	intronic	RBPMS2	NA	NA	NA	intronic	ENSG00000166831	NA	NA	NA	Score=412;Name=lod=63	NA	15q22.31	NA	Name=STAT3	Name=73	NA	rs6494493	0.78	0.78	0.743	0.701677	0.8917	0.9563	0.9121	0.3351	0.59	0.9	0.96	0.89	0.32	0.8116	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.382902	NA	NA	0.88381	0.41871	NA	0.667	NA	4.41289
1211	19	40318087	40318087	G	A	intronic	DYRK1B	NA	NA	NA	intronic	ENSG00000105204	NA	NA	NA	Score=259;Name=lod=15	NA	19q13.2	NA	NA	NA	NA	rs56110449	0.19	0.19	NA	0.229233	0.3002	0.124	0.2867	0.1415	0.3425	0.26	0.1	0.22	0.14	0.2865	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.19806	NA	NA	0.000581	0	NA	NA	NA	4.412719
1211	1	2452569	2452569	T	C	exonic	PANK4	NA	synonymous SNV	PANK4:NM_018216:exon3:c.A393G:p.K131K	exonic	ENSG00000157881	NA	synonymous SNV	ENSG00000157881:ENST00000378466:exon3:c.A393G:p.K131K	Score=473;Name=lod=112	NA	1p36.32	NA	NA	NA	NA	rs2985862	0.84	0.84	0.834	0.846046	0.7316	0.9563	0.8084	0.91	0.7904	0.72	0.98	0.8	0.91	0.7806	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.489176	1.489176	NA	0.742209	0.898774	NA	0.696	NA	4.4122576
1211	4	119615544	119615544	T	G	intronic	METTL14	NA	NA	NA	intronic	ENSG00000145388	NA	NA	NA	NA	NA	4q26	Score=901;Name=V$CREBP1CJUN_01	NA	NA	NA	rs57581623	0.15	0.15	0.139	0.161542	0.2167	0.1409	0.1326	0.1089	0.2178	0.22	0.12	0.15	0.08	0.1727	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.988333	NA	NA	0.198464	0.108538	NA	0.138	NA	4.412136
1211	6	76624741	76624741	C	T	UTR3	MYO6	NM_004999:c.*12C>T	NA	NA	UTR3	ENSG00000196586	ENST00000369981:c.*12C>T,ENST00000369985:c.*12C>T,ENST00000369977:c.*12C>T,ENST00000369975:c.*12C>T	NA	NA	NA	NA	6q14.1	NA	NA	NA	NA	rs12606	0.16	0.16	0.144	0.146965	0.2992	0.0516	0.1816	0.0091	0.2505	0.3	0.05	0.22	0.01	0.2878	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.218542	NA	NA	0.334302	0.058783	NA	0.138	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000038279.1;CLNDSDB=.;CLNDSDBID=.	4.4120314
1211	14	100808845	100808845	G	A	exonic	WARS	NA	synonymous SNV	WARS:NM_213645:exon8:c.C880T:p.L294L,WARS:NM_213646:exon8:c.C880T:p.L294L,WARS:NM_004184:exon9:c.C1003T:p.L335L,WARS:NM_173701:exon9:c.C1003T:p.L335L	exonic	ENSG00000140105	NA	synonymous SNV	ENSG00000140105:ENST00000344102:exon8:c.C880T:p.L294L,ENSG00000140105:ENST00000358655:exon8:c.C880T:p.L294L,ENSG00000140105:ENST00000355338:exon9:c.C1003T:p.L335L,ENSG00000140105:ENST00000392882:exon9:c.C1003T:p.L335L,ENSG00000140105:ENST00000556645:exon9:c.C880T:p.L294L,ENSG00000140105:ENST00000557135:exon10:c.C1003T:p.L335L	Score=464;Name=lod=103	NA	14q32.2	NA	NA	NA	NA	rs9453	0.7	0.7	0.656	0.692692	0.7644	0.755	0.8372	0.4372	0.7975	0.76	0.77	0.84	0.42	0.7464	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.452994	1.452994	NA	0.74407	0.491602	NA	0.609	NA	4.4117966
1211	4	3230804	3230804	A	C	intronic	HTT	NA	NA	NA	intronic	ENSG00000197386	NA	NA	NA	NA	NA	4p16.3	NA	Name=SUZ12,c-Myc	NA	NA	rs2530598	0.52	0.52	0.524	0.514577	0.5885	0.625	0.5821	0.2231	0.6708	0.57	0.66	0.57	0.25	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.059861	NA	NA	NA	NA	NA	0.391	NA	4.4115
1211	6	80912746	80912746	C	T	intronic	BCKDHB	NA	NA	NA	intronic	ENSG00000083123	NA	NA	NA	NA	NA	6q14.1	NA	NA	NA	NA	rs3828753	0.66	0.66	0.653	0.696286	0.5885	0.7063	0.7075	0.6823	0.8078	0.58	0.71	0.66	0.72	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.43936	NA	NA	NA	NA	NA	0.732	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000082773.1;CLNDSDB=.;CLNDSDBID=.	4.4115
1211	2	74761422	74761422	T	C	intronic	LOXL3	NA	NA	NA	intronic	ENSG00000115318	NA	NA	NA	NA	NA	2p13.1	NA	Name=Pol2-4H8	NA	NA	rs6707302	0.52	0.52	0.544	0.555112	0.1511	0.8294	0.379	0.9123	0.3303	0.14	0.83	0.31	0.89	0.2905	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.261412	NA	NA	0.147093	0.795506	NA	0.449	NA	4.411307
1211	6	26598188	26598188	A	G	exonic	ABT1	NA	synonymous SNV	ABT1:NM_013375:exon2:c.A288G:p.G96G	exonic	ENSG00000146109	NA	synonymous SNV	ENSG00000146109:ENST00000274849:exon2:c.A288G:p.G96G	NA	NA	6p22.2	NA	NA	NA	NA	rs3800303	0.49	0.49	0.451	0.516174	0.3787	0.6667	0.5144	0.4917	0.5368	0.4	0.64	0.49	0.45	0.4571	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.408847	NA	NA	0.419884	0.47685	NA	0.333	NA	4.4109826
1211	16	30366039	30366039	G	A	UTR5	CD2BP2	NM_001243646:c.-37C>T	NA	NA	UTR5	ENSG00000169217	ENST00000569466:c.-37C>T	NA	NA	NA	NA	16p11.2	NA	NA	Name=14	NA	rs35480350	0.17	0.17	0.159	0.171925	0.326	0.0794	0.2032	0.0348	0.272	0.3	0.08	0.2	0.05	0.2721	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.038553	NA	NA	0.324535	0.088757	NA	0.261	NA	4.4106984
1211	1	110194255	110194255	A	G	intergenic	AMPD2,GSTM4	dist=19578;dist=4443	NA	NA	ncRNA_exonic	ENSG00000235045	NA	NA	NA	Score=757;Name=lod=1586	NA	1p13.3	NA	NA	NA	NA	rs686163	0.62	0.62	0.608	0.610024	0.5895	0.6726	0.7176	0.5628	0.5542	0.59	0.67	0.71	0.57	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.5269	NA	NA	NA	NA	NA	0.645	NA	4.4105
1211	5	17354037	17354037	A	G	intergenic	BASP1,LOC401177	dist=77083;dist=24978	NA	NA	ncRNA_exonic	ENSG00000223361,ENSG00000248223	NA	NA	NA	Score=747;Name=lod=1448	NA	5p15.1	NA	NA	NA	NA	rs7733712	0.59	0.59	0.531	0.590855	0.5895	0.5456	0.5893	0.5764	0.6595	0.59	0.57	0.61	0.57	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.831345	1.831345	NA	NA	NA	NA	0.471	NA	4.4105
1211	5	17354041	17354041	T	C	intergenic	BASP1,LOC401177	dist=77087;dist=24974	NA	NA	ncRNA_exonic	ENSG00000223361,ENSG00000248223	NA	NA	NA	Score=747;Name=lod=1448	NA	5p15.1	NA	NA	NA	NA	rs7715898	0.58	0.58	0.527	0.590855	0.5895	0.5456	0.5893	0.5764	0.6595	0.59	0.57	0.6	0.57	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.700707	1.700707	NA	NA	NA	NA	0.471	NA	4.4105
1211	7	142469343	142469343	C	T	intergenic	PRSS1,PRSS3P2	dist=8416;dist=9414	NA	NA	ncRNA_exonic	ENSG00000250591	NA	NA	NA	Score=488;Name=lod=128	NA	7q34	NA	NA	NA	NA	rs11765409	0.38	0.38	0.342	0.323882	0.5895	0.2321	0.5101	0.0908	0.3282	0.59	0.25	0.52	0.11	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.103882	NA	NA	NA	NA	NA	0.42	NA	4.4105
1211	12	101463060	101463060	A	G	intronic	ANO4	NA	NA	NA	intronic	ENSG00000151572	NA	NA	NA	Score=397;Name=lod=55	NA	12q23.1	NA	NA	NA	NA	rs683561	0.76	0.76	0.739	0.802117	0.5895	0.8938	0.7233	0.9289	0.8108	0.58	0.89	0.73	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.238255	NA	NA	NA	NA	NA	0.688	NA	4.4105
1211	19	10404227	10404227	C	G	intronic	ICAM5	NA	NA	NA	intronic	ENSG00000105376	NA	NA	NA	NA	NA	19p13.2	NA	Name=Egr-1,E2F6_(H-50)	NA	NA	rs2569703	0.51	0.51	0.495	0.51897	0.5895	0.3442	0.647	0.5719	0.4642	0.58	0.37	0.6	0.52	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.027607	NA	NA	NA	NA	NA	0.558	NA	4.4105
1211	19	55716800	55716800	A	G	exonic	PTPRH	NA	synonymous SNV	PTPRH:NM_002842:exon4:c.T513C:p.T171T	exonic	ENSG00000080031	NA	synonymous SNV	ENSG00000080031:ENST00000376350:exon4:c.T513C:p.T171T	NA	NA	19q13.42	NA	NA	NA	NA	rs2288516	0.37	0.37	0.379	0.418331	0.4145	0.1964	0.3213	0.6172	0.4509	0.39	0.19	0.33	0.58	0.4119	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.059865	NA	NA	0.429884	0.589424	NA	0.268	NA	4.4103826
1211	4	71396989	71396989	C	T	exonic	AMTN	NA	synonymous SNV	AMTN:NM_212557:exon8:c.C591T:p.I197I	exonic	ENSG00000187689	NA	synonymous SNV	ENSG00000187689:ENST00000339336:exon8:c.C591T:p.I197I,ENSG00000187689:ENST00000504451:exon8:c.C588T:p.I196I	NA	NA	4q13.3	NA	NA	NA	NA	rs17676820	0.31	0.31	0.275	0.273762	0.4453	0.1994	0.4568	0.1157	0.2577	0.45	0.21	0.43	0.13	0.37	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.088251	NA	NA	0.441163	0.181798	ID=COSM1131067;OCCURENCE=1(prostate)	0.29	NA	4.4102036
1211	22	23029526	23029526	G	C	intergenic	GGTLC2,MIR650	dist=39158;dist=135744	NA	NA	exonic	ENSG00000211659	NA	nonsynonymous SNV	ENSG00000211659:ENST00000390305:exon2:c.G128C:p.G43A	NA	NA	22q11.22	NA	NA	NA	NA	rs3205084	0.2	0.2	0.196	0.194688	0.1342	0.2589	0.1412	0.2549	0.1472	0.14	0.27	0.15	0.25	0.1553	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.620847	1.620847	0.03	0.133791	0.220996	NA	0.181	NA	4.4100424
1211	16	55527113	55527113	G	A	exonic	MMP2	NA	synonymous SNV	MMP2:NM_001127891:exon9:c.G1230A:p.T410T,MMP2:NM_004530:exon9:c.G1380A:p.T460T	exonic	ENSG00000087245	NA	synonymous SNV	ENSG00000087245:ENST00000570283:exon3:c.G255A:p.T85T,ENSG00000087245:ENST00000219070:exon9:c.G1380A:p.T460T,ENSG00000087245:ENST00000437642:exon9:c.G1230A:p.T410T,ENSG00000087245:ENST00000543485:exon9:c.G1152A:p.T384T,ENSG00000087245:ENST00000570308:exon10:c.G1152A:p.T384T	NA	NA	16q12.2	NA	NA	NA	NA	rs2287074	0.35	0.35	0.334	0.32488	0.4344	0.2867	0.4395	0.1793	0.3671	0.47	0.29	0.44	0.17	0.3927	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.004256	NA	NA	0.429535	0.221565	NA	0.297	NA	4.4100316
1211	12	13828659	13828659	T	C	intronic	GRIN2B	NA	NA	NA	intronic	ENSG00000150086	NA	NA	NA	Score=601;Name=lod=370	NA	12p13.1	NA	NA	NA	NA	rs11055581	0.12	0.12	0.103	0.103834	0.2237	0.0129	0.1801	0.034	0.1145	0.22	0.01	0.22	0.03	0.1577	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.572374	NA	NA	0.208605	0.050159	ID=COSN164177;OCCURENCE=1(breast)	0.072	NA	4.409995
1211	22	42177899	42177899	A	G	intronic	MEI1	NA	NA	NA	intronic	ENSG00000167077	NA	NA	NA	NA	NA	22q13.2	NA	NA	Name=4	NA	rs45500192	0.16	0.16	0.105	0.158147	0.1948	0.0645	0.4092	0.0204	0.2249	0.19	0.06	0.41	0.03	0.2147	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.121063	NA	NA	0.18053	0.044051	NA	0.138	NA	4.40997
1211	11	65412467	65412467	G	A	exonic	SIPA1	NA	synonymous SNV	SIPA1:NM_006747:exon5:c.G1026A:p.A342A,SIPA1:NM_153253:exon5:c.G1026A:p.A342A	exonic	ENSG00000213445	NA	synonymous SNV	ENSG00000213445:ENST00000394227:exon4:c.G1026A:p.A342A,ENSG00000213445:ENST00000394224:exon5:c.G1026A:p.A342A,ENSG00000213445:ENST00000527525:exon5:c.G1026A:p.A342A,ENSG00000213445:ENST00000534313:exon5:c.G1026A:p.A342A	NA	NA	11q13.1	NA	NA	NA	NA	rs2306364	0.33	0.33	0.341	0.353435	0.4364	0.251	0.2579	0.3321	0.4703	0.44	0.22	0.3	0.32	0.4009	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.241069	1.241069	NA	0.419479	0.335756	NA	0.283	NA	4.4098876
1211	1	238655362	238655362	A	G	intergenic	LOC339535,CHRM3	dist=6045;dist=1137011	NA	NA	ncRNA_exonic	ENSG00000215149	NA	NA	NA	Score=554;Name=lod=238	NA	1q43	NA	NA	NA	NA	rs2392861	0.6	0.6	0.565	0.585463	0.5905	0.7718	0.611	0.4713	0.5245	0.57	0.76	0.58	0.47	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.078886	NA	NA	NA	NA	NA	0.609	NA	4.4095
1211	6	66547322	66547322	T	G	intergenic	SLC25A51P1,NONE	dist=47946;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000233859	NA	NA	NA	Score=784;Name=lod=2049	NA	6q12	NA	NA	NA	NA	rs9363455	0.68	0.68	0.623	0.639976	0.5905	0.7937	0.6931	0.4266	0.7832	0.6	0.85	0.69	0.59	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.793751	NA	NA	NA	NA	NA	0.565	NA	4.4095
1211	7	48943352	48943352	T	C	intergenic	ABCA13,CDC14C	dist=256261;dist=20805	NA	NA	ncRNA_exonic	ENSG00000229165	NA	NA	NA	Score=607;Name=lod=391	NA	7p12.3	NA	NA	NA	NA	rs887451	0.57	0.57	0.548	0.545128	0.5905	0.6558	0.5461	0.4312	0.5378	0.58	0.67	0.57	0.42	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.002199	NA	NA	NA	NA	NA	0.601	NA	4.4095
1211	4	22595940	22595940	A	G	intergenic	GPR125,GBA3	dist=78263;dist=98597	NA	NA	ncRNA_exonic	ENSG00000244538	NA	NA	NA	Score=689;Name=lod=845	NA	4p15.2	NA	NA	NA	NA	rs2618962	0.41	0.41	0.426	0.379593	0.5915	0.2123	0.4222	0.3283	0.3732	0.58	0.22	0.44	0.35	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.827066	2.827066	NA	NA	NA	NA	0.565	NA	4.4085
1211	16	1568402	1568402	A	G	intronic	IFT140	NA	NA	NA	intronic	ENSG00000187535	NA	NA	NA	NA	NA	16p13.3	NA	Name=ZNF263	NA	NA	rs2076434	0.27	0.27	0.287	0.288339	0.1859	0.3333	0.1614	0.4054	0.2791	0.2	0.31	0.18	0.39	0.2206	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.125425	NA	NA	0.185814	0.359254	NA	0.312	NA	4.407686
1211	10	54148888	54148888	C	A	intergenic	DKK1,MBL2	dist=71471;dist=376252	NA	NA	ncRNA_exonic	ENSG00000213657	NA	NA	NA	Score=703;Name=lod=955	NA	10q21.1	NA	NA	NA	NA	rs1194667	0.77	0.77	0.796	0.78734	0.5924	0.9335	0.6571	0.9501	0.7096	0.59	0.93	0.65	0.95	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.687718	NA	NA	NA	NA	NA	0.739	NA	4.4076
1211	10	54148923	54148923	G	A	intergenic	DKK1,MBL2	dist=71506;dist=376217	NA	NA	ncRNA_exonic	ENSG00000213657	NA	NA	NA	Score=703;Name=lod=955	NA	10q21.1	NA	NA	NA	NA	rs1194666	0.77	0.77	0.778	0.786342	0.5924	0.9335	0.6571	0.9463	0.7096	0.59	0.93	0.65	0.94	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.263608	NA	NA	NA	NA	NA	0.739	NA	4.4076
1211	10	54149243	54149243	A	C	intergenic	DKK1,MBL2	dist=71826;dist=375897	NA	NA	ncRNA_exonic	ENSG00000213657	NA	NA	NA	Score=703;Name=lod=955	NA	10q21.1	NA	NA	NA	NA	rs6480837	0.77	0.77	0.784	0.78734	0.5924	0.9335	0.6571	0.9501	0.7096	0.59	0.93	0.65	0.95	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2542	NA	NA	NA	NA	NA	0.739	NA	4.4076
1211	11	49942580	49942580	A	T	intergenic	LOC440040,OR4C13	dist=110611;dist=31363	NA	NA	ncRNA_exonic	ENSG00000254940	NA	NA	NA	Score=251;Name=lod=14	NA	11p11.12	NA	NA	NA	NA	rs12364337	0.51	0.51	0.483	0.492212	0.5924	0.5565	0.634	0.2912	0.4939	0.59	0.55	0.64	0.21	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.0001	NA	NA	NA	NA	NA	0.5	NA	4.4076
1211	1	159169641	159169641	T	C	exonic	CADM3	NA	synonymous SNV	CADM3:NM_001127173:exon8:c.T1053C:p.L351L,CADM3:NM_021189:exon9:c.T1155C:p.L385L	exonic	ENSG00000162706	NA	synonymous SNV	ENSG00000162706:ENST00000368125:exon8:c.T1053C:p.L351L,ENSG00000162706:ENST00000368124:exon9:c.T1155C:p.L385L	NA	NA	1q23.2	Score=858;Name=V$BRN2_01	NA	NA	NA	rs862999	0.83	0.83	0.855	0.83107	0.7425	0.9276	0.7205	0.9123	0.7914	0.75	0.94	0.7	0.91	0.7743	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.341194	NA	NA	0.742326	0.881979	NA	0.768	NA	4.4075406
1211	8	21890589	21890589	G	A	intronic	NPM2	NA	NA	NA	intronic	ENSG00000158806	NA	NA	NA	NA	NA	8p21.3	NA	NA	Name=3	NA	rs1947986	0.34	0.34	0.334	0.349441	0.3101	0.4514	0.2795	0.3064	0.3926	0.31	0.45	0.28	0.3	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.295606	NA	NA	0.282663	0.305166	NA	0.406	NA	4.407237
1211	15	76073218	76073218	C	A	intergenic	MIR4313,UBE2Q2	dist=18562;dist=62404	NA	NA	ncRNA_intronic	ENSG00000187812	NA	NA	NA	Score=441;Name=lod=83	NA	15q24.2	NA	NA	NA	NA	rs35237189	0.25	0.25	0.208	0.245807	0.3002	0.2321	0.3617	0.146	0.2566	0.31	0.2	0.33	0.14	0.2928	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.280466	NA	NA	NA	NA	ID=COSM147954;OCCURENCE=1(stomach)	0.261	NA	4.407
1211	6	110146303	110146303	G	A	exonic	FIG4	NA	synonymous SNV	FIG4:NM_014845:exon23:c.G2559A:p.S853S	exonic	ENSG00000112367	NA	synonymous SNV	ENSG00000112367:ENST00000441478:exon17:c.G1641A:p.S547S,ENSG00000112367:ENST00000230124:exon23:c.G2559A:p.S853S	NA	NA	6q21	NA	NA	NA	NA	rs1127771	0.39	0.39	0.384	0.395767	0.4205	0.5595	0.451	0.0915	0.5736	0.42	0.56	0.43	0.1	0.4289	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.444223	NA	NA	0.410349	0.14798	NA	0.333	NA	4.4069176
1211	4	9784631	9784631	C	T	exonic	DRD5	NA	synonymous SNV	DRD5:NM_000798:exon1:c.C978T:p.P326P	exonic	ENSG00000169676	NA	synonymous SNV	ENSG00000169676:ENST00000304374:exon1:c.C978T:p.P326P	NA	NA	4p16.1	NA	NA	NA	NA	rs6283	0.59	0.59	0.572	0.609026	0.6302	0.6121	0.6282	0.5946	0.59	0.59	0.59	0.62	0.57	0.6307	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.002421	NA	NA	NA	NA	NA	0.152	NA	4.4057666
1211	16	84170	84170	C	T	intergenic	DDX11L10,POLR3K	dist=20080;dist=12809	NA	NA	ncRNA_exonic	ENSG00000226942	NA	NA	NA	NA	NA	16p13.3	NA	NA	Name=4	NA	rs2562132	0.51	0.51	0.468	0.479233	0.5944	0.5992	0.4784	0.2655	0.5266	0.62	0.57	0.49	0.27	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.715464	NA	NA	NA	NA	NA	0.551	NA	4.4056
1211	2	220041091	220041091	G	A	intronic	CNPPD1	NA	NA	NA	UTR5	ENSG00000144567	ENST00000458520:c.-4367G>A	NA	NA	NA	NA	2q35	NA	Name=EBF1_(C-8),PAX5-C20,PAX5-N19,PU.1	Name=60	NA	rs6436123	0.42	0.42	0.409	0.401757	0.6163	0.2292	0.402	0.2421	0.5746	0.63	0.25	0.45	0.27	0.544	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.03113	2.03113	NA	0.600814	0.290967	NA	0.493	NA	4.4055527
1211	5	140572668	140572668	C	T	exonic	PCDHB10	NA	synonymous SNV	PCDHB10:NM_018930:exon1:c.C543T:p.N181N	exonic	ENSG00000120324	NA	synonymous SNV	ENSG00000120324:ENST00000239446:exon1:c.C543T:p.N181N	NA	NA	5q31.3	NA	NA	NA	NA	rs597064	0.48	0.48	0.474	0.48722	0.4076	0.5685	0.5432	0.5083	0.4172	0.4	0.57	0.47	0.49	0.4436	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.122476	NA	NA	0.410116	0.470041	NA	0.413	NA	4.4053506
1211	18	12718593	12718593	A	G	exonic	PSMG2	NA	synonymous SNV	PSMG2:NM_020232:exon4:c.A366G:p.S122S,PSMG2:NM_147163:exon4:c.A273G:p.S91S	exonic	ENSG00000128789	NA	synonymous SNV	ENSG00000128789:ENST00000317615:exon4:c.A366G:p.S122S,ENSG00000128789:ENST00000590217:exon4:c.A366G:p.S122S	NA	NA	18p11.21	NA	NA	NA	NA	rs2302768	0.33	0.33	0.318	0.293331	0.4324	0.3046	0.281	0.2466	0.2106	0.46	0.28	0.29	0.24	0.381	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.911817	NA	NA	0.448023	0.30345	NA	0.428	NA	4.4052436
1211	3	1424718	1424718	G	A	exonic	CNTN6	NA	synonymous SNV	CNTN6:NM_014461:exon18:c.G2259A:p.V753V	exonic	ENSG00000134115	NA	synonymous SNV	ENSG00000134115:ENST00000539053:exon17:c.G2043A:p.V681V,ENSG00000134115:ENST00000350110:exon18:c.G2259A:p.V753V,ENSG00000134115:ENST00000446702:exon18:c.G2259A:p.V753V	NA	NA	3p26.3	NA	NA	NA	NA	rs2291101	0.49	0.49	0.458	0.483427	0.3917	0.6508	0.5476	0.3684	0.5153	0.4	0.62	0.51	0.44	0.4449	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.639063	NA	NA	0.424884	0.372901	NA	0.406	NA	4.4051826
1211	6	151627034	151627034	A	G	exonic	AKAP12	NA	synonymous SNV	AKAP12:NM_005100:exon3:c.A315G:p.T105T	exonic	ENSG00000131016	NA	synonymous SNV	ENSG00000131016:ENST00000253332:exon2:c.A315G:p.T105T,ENSG00000131016:ENST00000402676:exon3:c.A315G:p.T105T	NA	NA	6q25.1	NA	NA	NA	NA	rs2294792	0.27	0.27	0.231	0.23103	0.4423	0.0615	0.3674	0.1172	0.2454	0.45	0.09	0.38	0.12	0.3829	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.036686	NA	NA	0.436395	0.178247	NA	0.312	NA	4.4050716
1212	15	65676617	65676617	T	C	exonic	IGDCC4	NA	synonymous SNV	IGDCC4:NM_020962:exon20:c.A3483G:p.P1161P	exonic	ENSG00000103742	NA	synonymous SNV	ENSG00000103742:ENST00000352385:exon20:c.A3483G:p.P1161P	NA	NA	15q22.31	NA	NA	NA	NA	rs2292933	0.55	0.55	0.508	0.520168	0.3926	0.6687	0.5994	0.5976	0.3374	0.41	0.67	0.56	0.6	0.4649	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.121801	NA	NA	0.404396	0.565652	NA	0.5	NA	4.4047706
1212	4	25417244	25417244	C	T	intronic	ANAPC4	NA	NA	NA	intronic	ENSG00000053900	NA	NA	NA	NA	Name=Rheumatoid arthritis	4p15.2	NA	NA	NA	NA	rs3816587	0.47	0.47	0.448	0.455072	0.5954	0.3056	0.5187	0.4576	0.4162	0.59	0.31	0.52	0.42	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.093565	NA	NA	NA	NA	NA	0.442	NA	4.4046
1212	12	48251533	48251533	C	T	intronic	VDR	NA	NA	NA	intronic	ENSG00000111424	NA	NA	NA	NA	NA	12q13.11	NA	Name=PU.1	NA	NA	rs11168266	0.5	0.5	0.52	0.51278	0.5954	0.3214	0.4726	0.5953	0.5419	0.59	0.29	0.5	0.62	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.265524	NA	NA	NA	NA	NA	0.493	NA	4.4046
1212	13	111118221	111118221	T	C	intronic	COL4A2	NA	NA	NA	intronic	ENSG00000134871	NA	NA	NA	NA	NA	13q34	NA	NA	Name=3	NA	rs1983932	0.52	0.52	0.525	0.513778	0.5954	0.2986	0.5115	0.6717	0.4397	0.59	0.28	0.56	0.68	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.216601	NA	NA	NA	NA	NA	0.536	NA	4.4046
1212	19	23438039	23438039	T	A	intergenic	ZNF724P,ZNF91	dist=4867;dist=102459	NA	NA	ncRNA_exonic	ENSG00000269837	NA	NA	NA	Score=667;Name=lod=683	NA	19p12	NA	NA	NA	NA	rs295357	0.53	0.53	0.512	0.504593	0.5954	0.6627	0.6326	0.1974	0.5726	0.62	0.66	0.59	0.2	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.11828	NA	NA	NA	NA	NA	0.391	NA	4.4046
1212	9	125140696	125140696	G	C	intronic	PTGS1	NA	NA	NA	intronic	ENSG00000095303	NA	NA	NA	NA	NA	9q33.2	NA	Name=GATA-1	NA	NA	rs2282169	0.26	0.26	0.283	0.303315	0.1899	0.1062	0.2839	0.6021	0.2331	0.18	0.09	0.27	0.58	0.2218	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.470604	NA	NA	0.183721	0.539038	NA	0.42	NA	4.404579
1212	10	26357820	26357820	C	T	intronic	MYO3A	NA	NA	NA	intronic	ENSG00000095777	NA	NA	NA	Score=455;Name=lod=94	NA	10p12.1	NA	NA	NA	NA	rs3817419	0.4	0.4	0.398	0.396366	0.5616	0.2956	0.3516	0.3124	0.4755	0.57	0.29	0.34	0.3	0.4844	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.212826	NA	NA	0.549535	0.367907	NA	0.449	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000039025.1;CLNDSDB=.;CLNDSDBID=.	4.404465
1212	19	9075737	9075737	T	C	exonic	MUC16	NA	synonymous SNV	MUC16:NM_024690:exon3:c.A11709G:p.V3903V	exonic	ENSG00000181143	NA	synonymous SNV	ENSG00000181143:ENST00000397910:exon3:c.A11709G:p.V3903V	NA	NA	19p13.2	NA	NA	NA	NA	rs2547071	0.45	0.45	0.445	0.45607	0.4314	0.5169	0.4265	0.4652	0.4274	0.43	0.51	0.44	0.43	0.42	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.017109	NA	NA	0.411224	0.464081	NA	0.457	NA	4.4040426
1212	12	65514266	65514266	T	C	exonic	WIF1	NA	synonymous SNV	WIF1:NM_007191:exon2:c.A219G:p.A73A	exonic	ENSG00000156076	NA	synonymous SNV	ENSG00000156076:ENST00000546001:exon1:c.A33G:p.A11A,ENSG00000156076:ENST00000286574:exon2:c.A219G:p.A73A	NA	NA	12q14.3	Score=838;Name=V$FAC1_01	NA	NA	NA	rs7301320	0.81	0.81	0.832	0.824081	0.7465	0.999	0.7118	0.7632	0.8855	0.74	1	0.72	0.73	0.7765	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.790534	NA	NA	0.739884	0.762596	NA	0.667	NA	4.4037826
1212	16	88695300	88695300	C	T	intronic	ZC3H18	NA	NA	NA	intronic	ENSG00000158545	NA	NA	NA	NA	NA	16q24.2	NA	Name=ZNF263,HDAC2_(SC-6296),CTCF_(C-20),SMC3_(ab9263),CTCFL_(SC-98982),SP2_(SC-643),HMGN3,CTCF,ELF1_(SC-631),Rad21	Name=47	NA	rs4782387	0.54	0.54	0.531	0.522364	0.5239	0.5337	0.6196	0.5946	0.3425	0.54	0.53	0.57	0.55	0.5413	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.251096	NA	NA	0.531054	0.592357	NA	0.442	NA	4.403746
1212	12	118520170	118520170	G	A	exonic	VSIG10	NA	synonymous SNV	VSIG10:NM_019086:exon3:c.C426T:p.Y142Y	exonic	ENSG00000176834	NA	synonymous SNV	ENSG00000176834:ENST00000359236:exon3:c.C426T:p.Y142Y	NA	NA	12q24.23	NA	NA	NA	NA	rs7488309	0.51	0.51	0.489	0.463259	0.4115	0.5903	0.5908	0.4705	0.2853	0.41	0.63	0.56	0.51	0.4422	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.154222	NA	NA	0.409245	0.428682	ID=COSM1359176;OCCURENCE=1(large_intestine)	0.37	NA	4.4037216
1212	10	16975078	16975078	G	A	intronic	CUBN	NA	NA	NA	intronic	ENSG00000107611	NA	NA	NA	NA	NA	10p13	NA	Name=CTCF	NA	NA	rs2271461	0.2	0.2	0.196	0.196885	0.1958	0.3194	0.1614	0.0862	0.2464	0.2	0.31	0.17	0.09	0.2065	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.501436	NA	NA	0.19407	0.127099	NA	0.181	NA	4.40363
1212	1	158146946	158146946	T	C	intergenic	LOC646268,CD1D	dist=36516;dist=2791	NA	NA	ncRNA_exonic	ENSG00000227295	NA	NA	NA	Score=714;Name=lod=1063	NA	1q23.1	NA	NA	NA	NA	rs3021477	0.72	0.72	0.703	0.727636	0.5964	0.8482	0.7579	0.7844	0.6401	0.6	0.85	0.72	0.76	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.182043	NA	NA	NA	NA	NA	0.732	NA	4.4036
1212	11	122659691	122659691	T	C	intronic	UBASH3B	NA	NA	NA	intronic	ENSG00000154127	NA	NA	NA	NA	NA	11q24.1	NA	Name=CTCF,CTCF_(SC-5916)	NA	NA	rs2370779	0.38	0.38	0.356	0.333267	0.5964	0.2173	0.3545	0.177	0.3783	0.62	0.21	0.42	0.19	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.591364	NA	NA	NA	NA	NA	0.37	NA	4.4036
1212	5	137802404	137802404	C	T	intronic	EGR1	NA	NA	NA	intronic	ENSG00000120738	NA	NA	NA	NA	NA	5q31.2	NA	Name=Pol2-4H8,Pol2,JunD,HEY1	Name=111	NA	rs11743810	0.39	0.39	0.385	0.360423	0.5358	0.1786	0.5692	0.2837	0.3231	0.54	0.16	0.56	0.3	0.497	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.946074	NA	NA	0.564419	0.337721	NA	0.391	NA	4.402781
1212	1	16386416	16386416	G	A	exonic	FAM131C	NA	synonymous SNV	FAM131C:NM_182623:exon5:c.C399T:p.D133D	exonic	ENSG00000185519	NA	synonymous SNV	ENSG00000185519:ENST00000375662:exon5:c.C399T:p.D133D	Score=401;Name=lod=57	NA	1p36.13	NA	NA	NA	NA	rs9442230	0.72	0.72	0.693	0.710463	0.7584	0.8155	0.768	0.4871	0.8139	0.76	0.84	0.77	0.5	0.7488	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.258009	1.258009	NA	0.75683	0.542118	ID=COSM424446;OCCURENCE=1(breast)	0.406	NA	4.4026366
1212	21	33368188	33368188	T	C	exonic	HUNK	NA	synonymous SNV	HUNK:NM_014586:exon10:c.T1413C:p.L471L	exonic	ENSG00000142149	NA	synonymous SNV	ENSG00000142149:ENST00000439107:exon4:c.T255C:p.L85L,ENSG00000142149:ENST00000270112:exon10:c.T1413C:p.L471L	Score=393;Name=lod=53	NA	21q22.11	NA	NA	NA	NA	rs2070371	0.7	0.7	0.697	0.703075	0.7555	0.6726	0.7017	0.6581	0.7423	0.77	0.69	0.65	0.66	0.7357	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.896716	NA	NA	0.772907	0.684521	NA	0.754	NA	4.4025596
1212	16	53526551	53526551	C	T	intronic	AKTIP	NA	NA	NA	ncRNA_exonic	ENSG00000262557	NA	NA	NA	NA	NA	16q12.2	NA	Name=MafK_(ab50322),MafK_(SC-477),MafF_(M8194)	NA	NA	rs9931702	0.46	0.46	0.497	0.509585	0.4602	0.1796	0.4006	0.8767	0.4816	0.45	0.15	0.45	0.85	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.65574	NA	NA	0.470773	0.764451	NA	0.638	NA	4.4023603
1212	13	43358176	43358176	G	A	intronic	FAM216B	NA	NA	NA	intronic	ENSG00000179813	NA	NA	NA	Score=265;Name=lod=16	NA	13q14.11	NA	NA	NA	NA	rs1324422	0.2	0.2	0.178	0.207069	0.1859	0.3204	0.2233	0.0545	0.3067	0.2	0.32	0.19	0.07	0.2156	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.872658	1.872658	NA	0.196744	0.070813	NA	0.21	NA	4.401756
1212	6	80064315	80064315	C	G	intergenic	LOC100288198,LCA5	dist=117798;dist=130393	NA	NA	ncRNA_exonic	ENSG00000218029	NA	NA	NA	Score=524;Name=lod=179	NA	6q14.1	NA	NA	NA	NA	rs7759249	0.72	0.72	0.711	0.767372	0.5984	0.8075	0.6657	0.9546	0.7188	0.58	0.79	0.64	0.92	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.164608	NA	NA	NA	NA	NA	0.659	NA	4.4016
1212	6	29857359	29857359	C	A	ncRNA_exonic	HLA-H	NA	NA	NA	ncRNA_exonic	ENSG00000206341	NA	NA	NA	Score=472;Name=lod=110	NA	6p22.1	NA	NA	NA	NA	rs28668506	0.53	0.53	0.587	0.613219	0.6332	0.5208	0.6571	0.6657	0.5859	0.55	0.43	0.51	0.63	0.6321	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.692485	NA	NA	NA	NA	NA	0.326	NA	4.4013666
1212	8	49207218	49207218	A	T	intergenic	UBE2V2,EFCAB1	dist=232764;dist=420256	NA	NA	ncRNA_exonic	ENSG00000253654	NA	NA	NA	Score=645;Name=lod=560	NA	8q11.21	NA	NA	NA	NA	rs11777512	0.48	0.48	0.432	0.38778	0.5994	0.502	0.5331	0.1384	0.2863	0.59	0.54	0.54	0.19	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.721058	NA	NA	NA	NA	NA	0.428	NA	4.4006
1212	8	134338367	134338367	G	A	intergenic	NDRG1,ST3GAL1	dist=28820;dist=128724	NA	NA	ncRNA_exonic	ENSG00000243537	NA	NA	NA	Score=690;Name=lod=849	NA	8q24.22	NA	NA	NA	NA	rs11778385	0.58	0.58	0.569	0.58127	0.5994	0.3532	0.7176	0.7579	0.4622	0.61	0.33	0.67	0.75	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.085244	NA	NA	NA	NA	NA	0.71	NA	4.4006
1212	17	55183203	55183203	T	C	exonic	AKAP1	NA	synonymous SNV	AKAP1:NM_003488:exon2:c.T378C:p.D126D,AKAP1:NM_001242902:exon3:c.T378C:p.D126D,AKAP1:NM_001242903:exon3:c.T378C:p.D126D	exonic	ENSG00000121057	NA	synonymous SNV	ENSG00000121057:ENST00000314126:exon2:c.T378C:p.D126D,ENSG00000121057:ENST00000337714:exon2:c.T378C:p.D126D,ENSG00000121057:ENST00000481416:exon2:c.T378C:p.D126D,ENSG00000121057:ENST00000539273:exon2:c.T378C:p.D126D,ENSG00000121057:ENST00000572156:exon2:c.T378C:p.D126D,ENSG00000121057:ENST00000572557:exon2:c.T378C:p.D126D,ENSG00000121057:ENST00000572814:exon2:c.T378C:p.D126D,ENSG00000121057:ENST00000575322:exon2:c.T378C:p.D126D,ENSG00000121057:ENST00000571629:exon3:c.T378C:p.D126D	NA	NA	17q22	NA	NA	NA	NA	rs2230772	0.49	0.49	0.473	0.478235	0.4026	0.8046	0.4798	0.3548	0.3855	0.4	0.78	0.43	0.34	0.4491	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.403052	NA	NA	0.414419	0.346346	NA	0.391	NA	4.4005476
1212	17	6538355	6538355	G	A	exonic	KIAA0753	NA	synonymous SNV	KIAA0753:NM_014804:exon2:c.C69T:p.S23S	exonic	ENSG00000198920	NA	synonymous SNV	ENSG00000198920:ENST00000570790:exon1:c.C69T:p.S23S,ENSG00000198920:ENST00000361413:exon2:c.C69T:p.S23S,ENSG00000198920:ENST00000573033:exon2:c.C69T:p.S23S,ENSG00000198920:ENST00000571642:exon3:c.C69T:p.S23S	NA	NA	17p13.1	NA	NA	NA	NA	rs2301873	0.36	0.36	0.334	0.336262	0.4543	0.2897	0.3271	0.2655	0.365	0.47	0.32	0.34	0.26	0.3849	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.290038	NA	NA	0.42701	0.290179	ID=COSM437193;OCCURENCE=1(breast)	0.246	NA	4.4004566
1212	20	57569816	57569816	G	T	UTR3	NELFCD	NM_198976:c.*85G>T	NA	NA	UTR3	ENSG00000101158	ENST00000602795:c.*85G>T,ENST00000344018:c.*85G>T,ENST00000460601:c.*85G>T	NA	NA	NA	NA	20q13.32	NA	Name=Pol2-4H8	NA	NA	rs7341	0.43	0.43	0.393	0.413538	0.4622	0.626	0.4308	0.152	0.4857	0.45	0.62	0.45	0.17	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.847403	NA	NA	0.470773	0.195809	NA	0.384	NA	4.4003604
1212	14	64476680	64476680	T	A	intronic	SYNE2	NA	NA	NA	intronic	ENSG00000054654	NA	NA	NA	NA	NA	14q23.2	NA	NA	NA	NA	rs7146588	0.33	0.33	0.355	0.35024	0.169	0.2272	0.304	0.6657	0.2699	0.18	0.24	0.32	0.66	0.2425	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.008243	2.008243	NA	0.188377	0.565578	NA	0.37	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118539.1;CLNDSDB=.;CLNDSDBID=.	4.400123
1212	16	24578458	24578458	T	C	intronic	RBBP6	NA	NA	NA	intronic	ENSG00000122257	NA	NA	NA	Score=623;Name=lod=455	Name=Obesity-related traits	16p12.1	NA	NA	NA	NA	rs7195386	0.61	0.61	0.596	0.669529	0.5328	0.4266	0.647	0.9017	0.7628	0.53	0.46	0.63	0.89	0.5654	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.597732	NA	NA	0.501744	0.82294	NA	0.609	NA	4.400056
1212	4	184600601	184600601	A	G	exonic	TRAPPC11	NA	synonymous SNV	TRAPPC11:NM_021942:exon9:c.A927G:p.A309A,TRAPPC11:NM_199053:exon9:c.A927G:p.A309A	exonic	ENSG00000168538	NA	synonymous SNV	ENSG00000168538:ENST00000334690:exon9:c.A927G:p.A309A,ENSG00000168538:ENST00000357207:exon9:c.A927G:p.A309A	NA	NA	4q35.1	NA	NA	NA	NA	rs4241779	0.48	0.48	0.488	0.485623	0.3907	0.5337	0.5187	0.6467	0.2924	0.4	0.51	0.45	0.59	0.4451	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.9436	NA	NA	0.430814	0.623695	NA	0.478	NA	4.4000526
1212	9	139371786	139371786	A	C	exonic	SEC16A	NA	synonymous SNV	SEC16A:NM_001276418:exon2:c.T282G:p.V94V,SEC16A:NM_014866:exon3:c.T282G:p.V94V	exonic	ENSG00000148396	NA	synonymous SNV	ENSG00000148396:ENST00000313050:exon1:c.T282G:p.V94V	NA	NA	9q34.3	NA	NA	NA	NA	rs6560632	0.39	0.39	0.381	0.38119	0.4105	0.2153	0.6124	0.4266	0.2965	0.42	0.22	0.53	0.44	0.4092	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.023667	NA	NA	0.446995	0.403663	NA	0.348	NA	4.3999716
1212	19	11233941	11233941	A	G	exonic	LDLR	NA	synonymous SNV	LDLR:NM_001195800:exon13:c.A1728G:p.R576R,LDLR:NM_001195803:exon13:c.A1698G:p.R566R,LDLR:NM_001195799:exon14:c.A2109G:p.R703R,LDLR:NM_001195802:exon14:c.A1869G:p.R623R,LDLR:NM_000527:exon15:c.A2232G:p.R744R,LDLR:NM_001195798:exon15:c.A2232G:p.R744R	exonic	ENSG00000130164	NA	synonymous SNV	ENSG00000130164:ENST00000455727:exon13:c.A1728G:p.R576R,ENSG00000130164:ENST00000545707:exon13:c.A1698G:p.R566R,ENSG00000130164:ENST00000535915:exon14:c.A2109G:p.R703R,ENSG00000130164:ENST00000557933:exon15:c.A2232G:p.R744R,ENSG00000130164:ENST00000558013:exon15:c.A2232G:p.R744R,ENSG00000130164:ENST00000558518:exon15:c.A2232G:p.R744R	NA	NA	19p13.2	NA	Name=Pol2(b)	NA	NA	rs5927	0.79	0.79	0.744	0.780152	0.7256	0.9554	0.853	0.6528	0.7761	0.73	0.95	0.83	0.65	0.7762	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.042992	NA	NA	0.765	0.687472	NA	0.652	NA	4.3998666
1212	6	66547178	66547178	G	A	intergenic	SLC25A51P1,NONE	dist=47802;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000233859	NA	NA	NA	Score=784;Name=lod=2049	NA	6q12	NA	NA	NA	NA	rs4392709	0.71	0.71	0.683	0.720248	0.6004	0.8611	0.7435	0.6339	0.7986	0.61	0.87	0.7	0.69	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.018496	NA	NA	NA	NA	NA	0.681	NA	4.3996
1212	7	22862192	22862192	A	G	intronic	TOMM7	NA	NA	NA	intronic	ENSG00000196683	NA	NA	NA	NA	NA	7p15.3	NA	Name=Pol2,AP-2gamma,Ini1	NA	NA	rs2270106	0.71	0.71	0.736	0.714657	0.6004	0.8452	0.5216	0.882	0.6084	0.63	0.83	0.52	0.86	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.644693	NA	NA	NA	NA	NA	0.797	NA	4.3996
1212	2	135694379	135694379	C	T	intronic	CCNT2	NA	NA	NA	intronic	ENSG00000082258	NA	NA	NA	NA	NA	2q21.3	Score=891;Name=V$FOXJ2_01	NA	Name=5	NA	rs1374289	0.72	0.72	0.731	0.734625	0.5457	0.877	0.6427	0.7761	0.7914	0.53	0.9	0.66	0.83	0.5891	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.971531	NA	NA	0.465698	0.713572	NA	0.543	NA	4.399502
1212	1	159169463	159169463	C	T	ncRNA_intronic	LOC100131825	NA	NA	NA	ncRNA_intronic	ENSG00000225670	NA	NA	NA	NA	NA	1q23.2	NA	NA	NA	NA	rs3027001	0.13	0.13	0.11	0.0972444	0.2674	0.0367	0.1282	0.0053	0.0869	0.27	0.03	0.15	0.01	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.422445	NA	NA	NA	NA	NA	0.065	NA	4.3992666
1212	14	106471528	106471528	C	A	intergenic	ADAM6,LINC00226	dist=33170;dist=272741	NA	NA	exonic	ENSG00000211935	NA	synonymous SNV	ENSG00000211935:ENST00000390595:exon2:c.G69T:p.L23L	Score=304;Name=lod=23	NA	14q32.33	NA	NA	NA	NA	rs35966079	0.44	0.44	0.408	0.586262	0.5934	0.7371	0.5663	0.3669	0.7342	0.45	0.61	0.41	0.24	0.5079	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.18637	NA	NA	NA	NA	NA	0.377	NA	4.3987
1212	1	16893335	16893335	T	C	intronic	NBPF1	NA	NA	NA	intronic	ENSG00000219481	NA	NA	NA	NA	NA	1p36.13	NA	Name=USF2,ATF3	NA	NA	rs663405	NA	NA	0.652	0.597444	0.6014	0.6111	0.5965	0.5991	0.5777	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.736135	NA	NA	NA	NA	NA	NA	NA	4.3986
1212	1	39815143	39815143	T	A	intronic	MACF1	NA	NA	NA	intronic	ENSG00000127603	NA	NA	NA	Score=518;Name=lod=170	NA	1p34.3	NA	NA	NA	NA	rs16826093	0.15	0.15	0.122	0.118211	0.1938	0.1577	0.2061	0.0136	0.0787	0.19	0.16	0.21	0.02	0.1852	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.627511	1.627511	NA	0.222674	0.045166	NA	0.109	NA	4.398326
1212	1	146513139	146513139	A	G	ncRNA_intronic	LOC728989	NA	NA	NA	ncRNA_intronic	ENSG00000227242	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs61838896	0.17	0.17	0.17	0.136182	0.2684	0.0268	0.1499	0.1536	0.0798	0.28	0.02	0.19	0.16	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.05649	NA	NA	NA	NA	NA	0.21	NA	4.3982666
1212	3	66463254	66463254	C	G	intronic	LRIG1	NA	NA	NA	intronic	ENSG00000144749	NA	NA	NA	NA	NA	3p14.1	NA	Name=BCL3	NA	NA	rs12493943	0.2	0.2	0.145	0.20008	0.2376	0.0575	0.3256	0.2269	0.183	0.24	0.05	0.31	0.23	0.2281	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.371558	NA	NA	0.136047	0.149796	ID=COSN166917;OCCURENCE=1(large_intestine)	0.261	NA	4.398253
1212	18	10487918	10487918	C	T	exonic	APCDD1	NA	synonymous SNV	APCDD1:NM_153000:exon5:c.C1428T:p.L476L	exonic	ENSG00000154856	NA	synonymous SNV	ENSG00000154856:ENST00000355285:exon5:c.C1428T:p.L476L	NA	NA	18p11.22	NA	NA	NA	NA	rs3185480	0.44	0.44	0.414	0.409944	0.4304	0.6181	0.4769	0.205	0.4039	0.45	0.63	0.46	0.21	0.4297	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.053536	NA	NA	0.408721	0.243532	NA	0.355	NA	4.3978456
1212	8	55435633	55435633	G	A	intergenic	SOX17,RP1	dist=62177;dist=92994	NA	NA	ncRNA_exonic	ENSG00000226098	NA	NA	NA	Score=556;Name=lod=242	NA	8q11.23	NA	NA	NA	NA	rs7820949	0.49	0.49	0.491	0.491813	0.6024	0.374	0.4813	0.4478	0.5665	0.59	0.39	0.49	0.44	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.113194	NA	NA	NA	NA	NA	0.529	NA	4.3976
1212	12	93131203	93131203	A	C	UTR5	PLEKHG7	NM_001004330:c.-92A>C	NA	NA	UTR5	ENSG00000187510	ENST00000549856:c.-92A>C,ENST00000344636:c.-92A>C	NA	NA	NA	NA	12q22	NA	NA	Name=3	NA	rs2036553	0.58	0.58	0.562	0.576478	0.4553	0.8889	0.67	0.3434	0.6278	0.46	0.9	0.65	0.34	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.245914	NA	NA	0.480515	0.349711	NA	0.442	NA	4.3975184
1212	22	50312979	50312979	C	T	intronic	CRELD2	NA	NA	NA	intronic	ENSG00000184164	NA	NA	NA	NA	NA	22q13.33	NA	Name=NRSF	NA	NA	rs9616382	0.22	0.22	0.225	0.246805	0.1988	0.1052	0.134	0.3888	0.3303	0.21	0.12	0.15	0.4	0.2081	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.68737	NA	NA	0.195698	0.341353	NA	0.326	NA	4.397402
1212	3	75475588	75475588	C	T	ncRNA_intronic	FAM86DP	NA	NA	NA	ncRNA_intronic	ENSG00000244026	NA	NA	NA	NA	NA	3p12.3	NA	NA	NA	NA	rs9860745	0.17	0.17	0.17	0.199481	0.1233	0.0476	0.1239	0.4682	0.1247	0.12	0.04	0.11	0.46	0.1462	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.438153	NA	NA	NA	NA	NA	0.007	NA	4.3971666
1212	19	21265171	21265171	C	T	intronic	ZNF714	NA	NA	NA	intronic	ENSG00000160352	NA	NA	NA	NA	NA	19p12	NA	Name=Oct-2,ELF1_(SC-631),TAF7_(SQ-8),Pol2,Pol2(phosphoS2),POU2F2,TAF1,TBP,GTF2B,HEY1,Sin3Ak-20,KAP1,ZNF263,Pol2-4H8,YY1,Pol2(b)	Name=23	NA	rs7258195	0.69	0.69	0.662	0.669129	0.8201	0.8591	0.8098	0.2027	0.8487	0.8	0.88	0.8	0.24	0.7831	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.328669	NA	NA	NA	NA	NA	0.688	NA	4.3968
1212	19	11227602	11227602	C	T	exonic	LDLR	NA	synonymous SNV	LDLR:NM_001195800:exon10:c.C1269T:p.N423N,LDLR:NM_001195799:exon11:c.C1650T:p.N550N,LDLR:NM_001195802:exon11:c.C1410T:p.N470N,LDLR:NM_001195803:exon11:c.C1392T:p.N464N,LDLR:NM_000527:exon12:c.C1773T:p.N591N,LDLR:NM_001195798:exon12:c.C1773T:p.N591N	exonic	ENSG00000130164	NA	synonymous SNV	ENSG00000130164:ENST00000455727:exon10:c.C1269T:p.N423N,ENSG00000130164:ENST00000535915:exon11:c.C1650T:p.N550N,ENSG00000130164:ENST00000545707:exon11:c.C1392T:p.N464N,ENSG00000130164:ENST00000557933:exon12:c.C1773T:p.N591N,ENSG00000130164:ENST00000558013:exon12:c.C1773T:p.N591N,ENSG00000130164:ENST00000558518:exon12:c.C1773T:p.N591N	NA	NA	19p13.2	NA	NA	NA	NA	rs688	0.28	0.28	0.224	0.275759	0.4414	0.1835	0.4582	0.0439	0.3845	0.45	0.15	0.43	0.06	0.3781	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.247951	NA	NA	0.450465	0.110304	NA	0.254	NA	4.3967016
1212	10	81652266	81652266	G	A	intergenic	LOC642361,LOC100288974	dist=64908;dist=12388	NA	NA	ncRNA_exonic	ENSG00000214584	NA	NA	NA	Score=771;Name=lod=1810	NA	10q22.3	NA	NA	NA	NA	rs927452	0.73	0.73	0.733	0.747604	0.6034	0.7758	0.6138	0.9123	0.7393	0.6	0.77	0.65	0.92	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.263574	NA	NA	NA	NA	NA	0.667	NA	4.3966
1212	19	10799750	10799750	T	C	intronic	ILF3	NA	NA	NA	intronic	ENSG00000129351	NA	NA	NA	NA	NA	19p13.2	NA	Name=Pol2	NA	NA	rs2742313	0.65	0.65	0.634	0.678115	0.6034	0.6438	0.7738	0.7368	0.6431	0.6	0.59	0.74	0.7	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.409274	NA	NA	NA	NA	NA	0.58	NA	4.3966
1212	21	32434692	32434692	C	T	intergenic	KRTAP19-8,TIAM1	dist=23897;dist=56044	NA	NA	ncRNA_exonic	ENSG00000228941	NA	NA	NA	Score=845;Name=lod=3636	NA	21q22.11	NA	NA	NA	NA	rs2070404	0.55	0.55	0.504	0.561901	0.6034	0.38	0.6787	0.5567	0.6309	0.62	0.38	0.68	0.54	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.705076	NA	NA	NA	NA	NA	0.558	NA	4.3966
1212	21	32434766	32434766	C	T	intergenic	KRTAP19-8,TIAM1	dist=23971;dist=55970	NA	NA	ncRNA_exonic	ENSG00000228941	NA	NA	NA	Score=845;Name=lod=3636	NA	21q22.11	NA	NA	NA	NA	rs2070405	0.55	0.55	0.506	0.561901	0.6034	0.38	0.6787	0.5567	0.6309	0.62	0.38	0.68	0.54	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.022591	NA	NA	NA	NA	NA	0.558	NA	4.3966
1212	21	32435137	32435137	A	C	intergenic	KRTAP19-8,TIAM1	dist=24342;dist=55599	NA	NA	ncRNA_exonic	ENSG00000228941	NA	NA	NA	Score=845;Name=lod=3636	NA	21q22.11	NA	NA	NA	NA	rs2833247	0.51	0.51	NA	0.561901	0.6034	0.38	0.6787	0.5567	0.6309	0.58	0.35	0.64	0.48	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.027851	NA	NA	NA	NA	NA	0.558	NA	4.3966
1212	21	32435347	32435347	A	G	intergenic	KRTAP19-8,TIAM1	dist=24552;dist=55389	NA	NA	ncRNA_exonic	ENSG00000228941	NA	NA	NA	Score=845;Name=lod=3636	NA	21q22.11	NA	NA	NA	NA	rs10854337	0.55	0.55	0.492	0.561701	0.6034	0.379	0.6787	0.5567	0.6309	0.62	0.38	0.68	0.54	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.25461	NA	NA	NA	NA	NA	0.558	NA	4.3966
1212	19	21265197	21265197	G	T	intronic	ZNF714	NA	NA	NA	intronic	ENSG00000160352	NA	NA	NA	NA	NA	19p12	NA	Name=ZNF263,KAP1,YY1,Pol2(b),Oct-2,ELF1_(SC-631),YY1_(C-20),Pol2,POU2F2,TAF1	Name=23	NA	rs7258409	0.69	0.69	0.652	0.669329	0.8211	0.8591	0.8098	0.2027	0.8487	0.8	0.88	0.8	0.24	0.7826	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.272067	NA	NA	NA	NA	NA	0.688	NA	4.3963
1212	10	15106441	15106441	A	G	exonic	OLAH	NA	synonymous SNV	OLAH:NM_001039702:exon5:c.A342G:p.L114L,OLAH:NM_018324:exon6:c.A501G:p.L167L	exonic	ENSG00000152463	NA	synonymous SNV	ENSG00000152463:ENST00000378228:exon5:c.A342G:p.L114L,ENSG00000152463:ENST00000428897:exon5:c.A342G:p.L114L,ENSG00000152463:ENST00000429028:exon5:c.A342G:p.L114L,ENSG00000152463:ENST00000378217:exon6:c.A501G:p.L167L	NA	NA	10p13	NA	NA	NA	NA	rs10906818	0.45	0.45	0.479	0.47504	0.4165	0.5744	0.3429	0.4198	0.6012	0.39	0.59	0.36	0.43	0.4333	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.225106	NA	NA	0.420698	0.413527	NA	0.428	NA	4.3961686
1212	2	128370200	128370200	G	A	intronic	MYO7B	NA	NA	NA	intronic	ENSG00000169994	NA	NA	NA	NA	NA	2q14.3	Score=752;Name=V$MEF2_04	NA	NA	NA	rs705092	0.15	0.15	0.141	0.169928	0.1998	0.129	0.1254	0.0794	0.3354	0.2	0.15	0.13	0.08	0.2166	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.323308	NA	NA	0.187589	0.092646	NA	0.109	NA	4.396011
1212	2	175613600	175613600	T	C	intronic	CHRNA1	NA	NA	NA	ncRNA_intronic	ENSG00000236449	NA	NA	NA	NA	NA	2q31.1	NA	Name=CTCF	NA	NA	rs2646159	0.9	0.9	0.893	0.883187	0.9374	1	0.951	0.6543	0.9683	0.93	1	0.95	0.72	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.221471	NA	NA	NA	NA	NA	0.884	NA	4.3959333
1212	4	117520667	117520667	C	G	intergenic	MIR1973,TRAM1L1	dist=299743;dist=484043	NA	NA	ncRNA_exonic	ENSG00000213493	NA	NA	NA	Score=632;Name=lod=495	NA	4q26	NA	NA	NA	NA	rs4833515	0.67	0.67	0.666	0.692891	0.6044	0.5486	0.755	0.8147	0.7239	0.61	0.58	0.76	0.8	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.012553	NA	NA	NA	NA	NA	0.674	NA	4.3956
1212	17	66938232	66938232	A	G	intronic	ABCA8	NA	NA	NA	intronic	ENSG00000141338	NA	NA	NA	NA	NA	17q24.2	NA	Name=CEBPB	NA	NA	rs4147958	0.59	0.59	0.621	0.635982	0.6044	0.3948	0.5432	0.8548	0.6871	0.58	0.38	0.57	0.87	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.136666	NA	NA	NA	NA	NA	0.659	NA	4.3956
1212	14	37132769	37132769	G	A	intronic	PAX9	NA	NA	NA	intronic	ENSG00000198807	NA	NA	NA	NA	Name=Breast cancer	14q13.3	NA	NA	NA	NA	rs2236007	0.18	0.18	0.163	0.166334	0.2167	0.3155	0.121	0.0356	0.1697	0.19	0.32	0.13	0.03	0.1897	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.083609	NA	NA	0.198304	0.073003	NA	0.094	NA	4.395296
1212	16	15872748	15872748	G	T	intronic	MYH11	NA	NA	NA	intronic	ENSG00000133392	NA	NA	NA	NA	NA	16p13.11	NA	NA	Name=3	NA	rs11644832	0.22	0.22	0.207	0.198882	0.2008	0.3234	0.1369	0.1649	0.1585	0.21	0.32	0.15	0.17	0.1971	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.036146	NA	NA	0.206977	0.174556	NA	0.13	NA	4.395123
1213	2	44502788	44502788	A	C	exonic	SLC3A1	NA	synonymous SNV	SLC3A1:NM_000341:exon1:c.A114C:p.G38G	exonic	ENSG00000138079	NA	synonymous SNV	ENSG00000138079:ENST00000260649:exon1:c.A114C:p.G38G,ENSG00000138079:ENST00000409229:exon1:c.A114C:p.G38G,ENSG00000138079:ENST00000409387:exon1:c.A114C:p.G38G,ENSG00000138079:ENST00000409741:exon1:c.A114C:p.G38G,ENSG00000138079:ENST00000410056:exon1:c.A114C:p.G38G	NA	NA	2p21	NA	NA	NA	NA	rs3738985	0.67	0.67	0.685	0.703474	0.7684	0.377	0.6715	0.8048	0.8589	0.76	0.4	0.69	0.83	0.7328	0.83	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	.	.	.	.	.	-0.199	3.034	0.761	-0.220	0.063	6.610	-0.199049	NA	NA	0.770698	0.794825	NA	0.746	NA	4.3947686
1213	1	212220847	212220847	G	A	intronic	DTL	NA	NA	NA	intronic	ENSG00000143476	NA	NA	NA	NA	NA	1q32.3	NA	NA	Name=2	NA	rs2970592	0.49	0.49	0.484	0.499002	0.6054	0.4018	0.4856	0.4682	0.5409	0.6	0.42	0.43	0.45	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.730393	NA	NA	NA	NA	NA	0.493	NA	4.3946
1213	8	13563102	13563102	A	G	intergenic	C8orf48,SGCZ	dist=137305;dist=384271	NA	NA	downstream	ENSG00000255457	NA	NA	NA	Score=403;Name=lod=58	NA	8p22	NA	NA	NA	NA	rs71522377	0.1	0.1	0.105	0.112021	0.1054	0.0486	0.0821	0.1959	0.092	0.1	0.04	0.08	0.18	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.235458	NA	NA	NA	NA	ID=COSN168280;OCCURENCE=1(large_intestine)	0.08	NA	4.3946
1213	6	33740592	33740592	C	T	intronic	LEMD2	NA	NA	NA	intronic	ENSG00000161904	NA	NA	NA	NA	NA	6p21.31	NA	Name=GATA-2	Name=56	NA	rs4711349	0.52	0.52	0.495	0.534944	0.504	0.8313	0.4625	0.2572	0.6881	0.52	0.81	0.44	0.24	0.5605	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.236719	NA	NA	0.541047	0.302452	NA	0.572	NA	4.394453
1213	3	157154861	157154861	A	G	intronic	PTX3,VEPH1	NA	NA	NA	intronic	ENSG00000163661,ENSG00000197415	NA	NA	NA	NA	NA	3q25.32	NA	Name=Pol2(b)	Name=114	NA	rs2305619	0.55	0.55	0.502	0.5627	0.5437	0.621	0.6585	0.4092	0.6616	0.53	0.64	0.63	0.41	0.5422	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.131817	NA	NA	0.519651	0.423513	ID=COSM149506;OCCURENCE=1(stomach)	0.601	NA	4.394449
1213	5	77080768	77080768	A	G	intergenic	TBCA,AP3B1	dist=8583;dist=217382	NA	NA	ncRNA_exonic	ENSG00000213763	NA	NA	NA	Score=867;Name=lod=4445	NA	5q14.1	NA	NA	NA	NA	rs254406	0.56	0.56	0.548	0.580272	0.6064	0.4702	0.4467	0.6384	0.683	0.59	0.51	0.48	0.62	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.295408	NA	NA	NA	NA	NA	0.478	NA	4.3936
1213	9	35148203	35148203	C	G	intergenic	FAM214B,UNC13B	dist=32310;dist=13786	NA	NA	ncRNA_exonic	ENSG00000215198	NA	NA	NA	NA	NA	9p13.3	NA	Name=SETDB1	NA	NA	rs10972348	0.46	0.46	0.437	0.438099	0.6064	0.2054	0.6902	0.4213	0.3487	0.57	0.22	0.67	0.4	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.290791	NA	NA	NA	NA	NA	0.471	NA	4.3936
1213	10	30978388	30978388	C	T	intergenic	LYZL2,ZNF438	dist=59741;dist=155177	NA	NA	ncRNA_exonic	ENSG00000234814	NA	NA	NA	Score=595;Name=lod=349	NA	10p11.23	NA	NA	NA	NA	rs28582447	NA	NA	0.41	0.483227	0.6064	0.3998	0.5101	0.3245	0.638	NA	NA	NA	NA	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.86388	NA	NA	NA	NA	NA	0.37	NA	4.3936
1213	12	80496928	80496928	G	A	intergenic	PPP1R12A,OTOGL	dist=167693;dist=106305	NA	NA	ncRNA_exonic	ENSG00000230291	NA	NA	NA	Score=748;Name=lod=1455	NA	12q21.31	NA	NA	NA	NA	rs7295948	0.61	0.61	0.641	0.605431	0.6064	0.4663	0.4856	0.8321	0.5266	0.6	0.48	0.53	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.19293	NA	NA	NA	NA	NA	0.601	NA	4.3936
1213	13	25940072	25940072	T	C	intergenic	NUPL1,ATP8A2	dist=23511;dist=6137	NA	NA	ncRNA_exonic	ENSG00000234152	NA	NA	NA	Score=581;Name=lod=305	NA	13q12.13	NA	NA	NA	NA	rs9319215	0.49	0.49	0.463	0.459465	0.6064	0.5942	0.4424	0.2254	0.498	0.6	0.61	0.45	0.22	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.469809	NA	NA	NA	NA	NA	0.406	NA	4.3936
1213	19	1080311	1080311	G	C	exonic	HMHA1	NA	synonymous SNV	HMHA1:NM_001258328:exon14:c.G1809C:p.P603P,HMHA1:NM_012292:exon14:c.G1761C:p.P587P	exonic	ENSG00000180448	NA	synonymous SNV	ENSG00000180448:ENST00000590577:exon4:c.G666C:p.P222P,ENSG00000180448:ENST00000536472:exon13:c.G1281C:p.P427P,ENSG00000180448:ENST00000543365:exon13:c.G1410C:p.P470P,ENSG00000180448:ENST00000313093:exon14:c.G1761C:p.P587P,ENSG00000180448:ENST00000539243:exon14:c.G1809C:p.P603P,ENSG00000180448:ENST00000586866:exon14:c.G1773C:p.P591P,ENSG00000180448:ENST00000590214:exon14:c.G1842C:p.P614P	NA	NA	19p13.3	Score=723;Name=V$LUN1_01	NA	NA	NA	rs2074454	0.75	0.75	0.726	0.742212	0.7396	0.6548	0.8487	0.795	0.6881	0.74	0.69	0.83	0.78	0.7693	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.043428	NA	NA	0.764254	0.791326	ID=COSM438504;OCCURENCE=3(breast)	0.746	NA	4.3935126
1213	9	154795	154795	T	C	exonic	CBWD1	NA	synonymous SNV	CBWD1:NM_001145356:exon8:c.A576G:p.R192R,CBWD1:NM_018491:exon8:c.A576G:p.R192R,CBWD1:NM_001145355:exon9:c.A468G:p.R156R	exonic	ENSG00000172785	NA	synonymous SNV	ENSG00000172785:ENST00000356521:exon8:c.A576G:p.R192R,ENSG00000172785:ENST00000377447:exon8:c.A576G:p.R192R,ENSG00000172785:ENST00000382447:exon8:c.A576G:p.R192R,ENSG00000172785:ENST00000314367:exon9:c.A468G:p.R156R	Score=528;Name=lod=186	NA	9p24.3	NA	NA	NA	NA	rs2785333	0.7	0.7	0.642	0.786941	0.7614	0.7232	0.7709	0.8306	0.8313	0.7	0.65	0.73	0.74	0.7555	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.017871	NA	NA	0.756291	0.776772	NA	0.37	NA	4.3934756
1213	17	4641755	4641755	C	T	exonic	CXCL16	NA	synonymous SNV	CXCL16:NM_001100812:exon3:c.G306A:p.G102G,CXCL16:NM_022059:exon3:c.G306A:p.G102G	exonic	ENSG00000161921	NA	synonymous SNV	ENSG00000161921:ENST00000573123:exon2:c.G87A:p.G29G,ENSG00000161921:ENST00000293778:exon3:c.G306A:p.G102G,ENSG00000161921:ENST00000574412:exon3:c.G306A:p.G102G	NA	NA	17p13.2	NA	NA	Name=22	NA	rs1050997	0.66	0.66	0.636	0.624002	0.7913	0.6944	0.6816	0.3828	0.6646	0.79	0.7	0.67	0.4	0.7082	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.545202	NA	NA	0.773721	0.456196	ID=COSM148161;OCCURENCE=1(stomach)	0.667	NA	4.3934456
1213	17	10448769	10448769	A	T	exonic	MYH2	NA	synonymous SNV	MYH2:NM_001100112:exon5:c.T399A:p.P133P,MYH2:NM_017534:exon5:c.T399A:p.P133P	exonic	ENSG00000125414	NA	synonymous SNV	ENSG00000125414:ENST00000578017:exon2:c.T162A:p.P54P,ENSG00000125414:ENST00000431502:exon4:c.T399A:p.P133P,ENSG00000125414:ENST00000532183:exon4:c.T399A:p.P133P,ENSG00000125414:ENST00000245503:exon5:c.T399A:p.P133P,ENSG00000125414:ENST00000397183:exon5:c.T399A:p.P133P,ENSG00000125414:ENST00000420805:exon5:c.T399A:p.P133P	NA	NA	17p13.1	NA	NA	NA	NA	rs11078850	0.51	0.51	0.464	0.516773	0.3847	0.8333	0.5144	0.3018	0.6186	0.38	0.85	0.52	0.31	0.4808	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.149072	NA	NA	0.408256	0.332047	NA	0.507	NA	4.3929106
1213	10	17113563	17113563	C	T	exonic	CUBN	NA	synonymous SNV	CUBN:NM_001081:exon19:c.G2487A:p.S829S	exonic	ENSG00000107611	NA	synonymous SNV	ENSG00000107611:ENST00000377833:exon19:c.G2487A:p.S829S	NA	NA	10p13	NA	NA	NA	NA	rs1801225	0.36	0.36	0.311	0.35603	0.3966	0.5407	0.4827	0.0552	0.4407	0.38	0.53	0.48	0.06	0.4252	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.053101	NA	NA	0.452209	0.108261	NA	0.275	NA	4.3926576
1213	5	77081240	77081240	T	G	intergenic	TBCA,AP3B1	dist=9055;dist=216910	NA	NA	ncRNA_exonic	ENSG00000213763	NA	NA	NA	Score=867;Name=lod=4445	NA	5q14.1	NA	NA	NA	NA	rs254403	0.54	0.54	0.542	0.565695	0.6074	0.4702	0.4366	0.5908	0.6789	0.58	0.5	0.47	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.213168	NA	NA	NA	NA	NA	0.464	NA	4.3926
1213	11	33581153	33581153	T	C	intronic	KIAA1549L	NA	NA	NA	intronic	ENSG00000110427	NA	NA	NA	Score=325;Name=lod=28	NA	11p13	NA	NA	NA	NA	rs2076627	0.61	0.61	0.588	0.589058	0.6074	0.6687	0.572	0.5454	0.5593	0.63	0.66	0.59	0.54	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.196693	NA	NA	NA	NA	NA	0.493	NA	4.3926
1213	19	49646006	49646006	A	G	intronic	PPFIA3	NA	NA	NA	intronic	ENSG00000177380	NA	NA	NA	NA	NA	19q13.33	NA	Name=GATA-2	NA	NA	rs4545921	0.59	0.59	0.588	0.606829	0.6074	0.245	0.5965	0.9297	0.5501	0.61	0.24	0.67	0.92	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.772296	NA	NA	NA	NA	NA	0.638	NA	4.3926
1213	7	64168806	64168806	T	C	exonic	ZNF107	NA	synonymous SNV	ZNF107:NM_001013746:exon5:c.T2124C:p.T708T,ZNF107:NM_016220:exon7:c.T2124C:p.T708T	exonic	ENSG00000196247	NA	synonymous SNV	ENSG00000196247:ENST00000395391:exon4:c.T2124C:p.T708T,ENSG00000196247:ENST00000344930:exon5:c.T2124C:p.T708T,ENSG00000196247:ENST00000423627:exon5:c.T2124C:p.T708T	NA	NA	7q11.21	NA	NA	NA	NA	rs4718103	0.31	0.31	0.298	0.329273	0.4314	0.25	0.3876	0.1505	0.5061	0.41	0.25	0.4	0.16	0.4071	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.269988	1.269988	NA	0.435653	0.209677	NA	0.239	NA	4.3925136
1213	3	133670225	133670225	T	C	intronic	SLCO2A1	NA	NA	NA	intronic	ENSG00000174640	NA	NA	NA	Score=251;Name=lod=14	NA	3q22.1	NA	NA	NA	NA	rs6767522	0.25	0.25	0.25	0.254393	0.1909	0.2827	0.2421	0.3215	0.2086	0.21	0.27	0.25	0.32	0.228	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.141348	NA	NA	0.188721	0.317068	NA	0.174	NA	4.392379
1213	8	27255146	27255146	G	A	exonic	PTK2B	NA	synonymous SNV	PTK2B:NM_173175:exon2:c.G45A:p.T15T,PTK2B:NM_173176:exon2:c.G45A:p.T15T,PTK2B:NM_004103:exon3:c.G45A:p.T15T,PTK2B:NM_173174:exon7:c.G45A:p.T15T	exonic	ENSG00000120899	NA	synonymous SNV	ENSG00000120899:ENST00000517339:exon1:c.G45A:p.T15T,ENSG00000120899:ENST00000346049:exon2:c.G45A:p.T15T,ENSG00000120899:ENST00000412793:exon2:c.G45A:p.T15T,ENSG00000120899:ENST00000420218:exon2:c.G45A:p.T15T,ENSG00000120899:ENST00000522517:exon2:c.G45A:p.T15T,ENSG00000120899:ENST00000521164:exon3:c.G45A:p.T15T,ENSG00000120899:ENST00000522338:exon4:c.G45A:p.T15T,ENSG00000120899:ENST00000544172:exon6:c.G45A:p.T15T,ENSG00000120899:ENST00000338238:exon7:c.G45A:p.T15T,ENSG00000120899:ENST00000397501:exon7:c.G45A:p.T15T	NA	NA	8p21.2	NA	NA	NA	NA	rs1045511	0.33	0.33	0.323	0.311502	0.4304	0.2748	0.3818	0.1823	0.3517	0.44	0.27	0.38	0.2	0.398	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.140269	NA	NA	0.446395	0.213118	NA	0.297	NA	4.3918716
1213	8	134420163	134420163	G	A	intergenic	NDRG1,ST3GAL1	dist=110616;dist=46928	NA	NA	upstream	ENSG00000225259	NA	NA	NA	NA	NA	8q24.22	NA	Name=USF-1	NA	NA	rs1989289	0.13	0.13	0.126	0.128395	0.1083	0.0506	0.1974	0.208	0.0726	0.11	0.05	0.18	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.450999	NA	NA	NA	NA	NA	0.109	NA	4.3917
1213	12	80496684	80496684	C	G	intergenic	PPP1R12A,OTOGL	dist=167449;dist=106549	NA	NA	ncRNA_exonic	ENSG00000230291	NA	NA	NA	Score=748;Name=lod=1455	NA	12q21.31	NA	NA	NA	NA	rs7138580	0.62	0.62	0.631	0.613818	0.6083	0.4692	0.536	0.8336	0.5266	0.61	0.48	0.57	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.082832	NA	1	NA	NA	NA	0.667	NA	4.3917
1213	12	80496825	80496825	T	C	intergenic	PPP1R12A,OTOGL	dist=167590;dist=106408	NA	NA	ncRNA_exonic	ENSG00000230291	NA	NA	NA	Score=748;Name=lod=1455	NA	12q21.31	NA	NA	NA	NA	rs7315692	0.6	0.6	0.614	0.60623	0.6083	0.4663	0.4885	0.8321	0.5266	0.6	0.48	0.53	0.8	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.096537	NA	1	NA	NA	NA	0.659	NA	4.3917
1213	16	29636030	29636030	T	C	intergenic	SLC7A5P1,SPN	dist=10992;dist=38241	NA	NA	ncRNA_exonic	ENSG00000260514	NA	NA	NA	Score=676;Name=lod=745	NA	16p11.2	NA	NA	NA	NA	rs28480378	0.7	0.7	0.683	0.738019	0.6083	0.753	0.5159	0.8933	0.8037	0.6	0.75	0.57	0.88	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.144946	NA	NA	NA	NA	NA	0.696	NA	4.3917
1213	15	71184278	71184278	G	T	exonic	THAP10	NA	synonymous SNV	THAP10:NM_020147:exon1:c.C334A:p.R112R	exonic	ENSG00000129028	NA	synonymous SNV	ENSG00000129028:ENST00000249861:exon1:c.C334A:p.R112R	NA	NA	15q23	NA	NA	NA	NA	rs2959174	0.52	0.52	0.523	0.549121	0.4066	0.5823	0.2954	0.7731	0.5389	0.41	0.6	0.31	0.75	0.4612	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0367	NA	NA	0.407377	0.708731	NA	0.543	NA	4.3914896
1213	16	29342500	29342500	T	A	ncRNA_intronic	SNX29P2	NA	NA	NA	ncRNA_intronic	ENSG00000198106,ENSG00000260413	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs9745636	0.47	0.47	0.44	0.514776	0.2753	0.6052	0.4813	0.6445	0.5164	0.28	0.59	0.42	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.548029	NA	NA	NA	NA	NA	0.145	NA	4.3913666
1213	16	29342517	29342517	T	G	ncRNA_intronic	SNX29P2	NA	NA	NA	ncRNA_intronic	ENSG00000198106,ENSG00000260413	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs9745637	0.45	0.45	0.336	0.494209	0.2753	0.6062	0.4798	0.5666	0.5164	0.28	0.59	0.41	0.59	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.610045	NA	NA	NA	NA	NA	0.152	NA	4.3913666
1213	6	150209309	150209309	C	G	ncRNA_intronic	LOC100652739	NA	NA	NA	ncRNA_intronic	ENSG00000223701,ENSG00000268592	NA	NA	NA	NA	NA	6q25.1	NA	Name=p300_(N-15),TBP,AP-2gamma,STAT3,Pol2,AP-2alpha	NA	NA	rs9322228	0.55	0.55	0.537	0.546526	0.4195	0.8859	0.5058	0.4561	0.4785	0.41	0.87	0.51	0.43	0.4604	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.23319	NA	NA	0.39553	0.457763	NA	0.587	NA	4.3912366
1213	19	1052005	1052005	C	T	exonic	ABCA7	NA	synonymous SNV	ABCA7:NM_019112:exon22:c.C3027T:p.A1009A	exonic	ENSG00000064687	NA	synonymous SNV	ENSG00000064687:ENST00000435683:exon16:c.C2613T:p.A871A,ENSG00000064687:ENST00000433129:exon21:c.C3027T:p.A1009A,ENSG00000064687:ENST00000263094:exon22:c.C3027T:p.A1009A	NA	NA	19p13.3	NA	NA	NA	NA	rs3764652	0.38	0.38	0.4	0.379393	0.4225	0.3353	0.4107	0.326	0.4305	0.44	0.37	0.43	0.29	0.4256	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.92747	NA	NA	0.427738	0.350365	NA	0.275	NA	4.3908286
1213	7	29720404	29720404	A	G	ncRNA_exonic	MIR550A3	NA	NA	NA	ncRNA_exonic	ENSG00000212024	NA	NA	NA	NA	NA	7p14.3	NA	NA	NA	NA	rs850108	0.18	0.18	0.103	NA	NA	NA	NA	NA	NA	0.25	0.05	0.22	0.18	0.2762	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.548467	NA	NA	NA	NA	NA	0.239	NA	4.3904666
1213	12	93252383	93252383	G	T	intronic	EEA1	NA	NA	NA	ncRNA_exonic	ENSG00000258012	NA	NA	NA	Score=821;Name=lod=2881	NA	12q22	NA	NA	NA	NA	rs1979804	0.91	0.91	0.898	0.902157	0.9433	0.9623	0.938	0.7769	0.9417	0.94	0.96	0.94	0.79	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.430631	NA	NA	NA	NA	NA	0.906	NA	4.3900333
1213	15	76020525	76020525	C	T	ncRNA_exonic	DNM1P35	NA	NA	NA	ncRNA_exonic	ENSG00000246877	NA	NA	NA	NA	NA	15q24.2	NA	NA	NA	NA	rs34402412	0.21	0.21	0.176	0.215655	0.2773	0.1815	0.3285	0.1346	0.2168	0.29	0.12	0.28	0.13	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.255164	NA	NA	NA	NA	NA	0.312	NA	4.3893666
1213	1	158390501	158390501	G	A	exonic	OR10K2	NA	synonymous SNV	OR10K2:NM_001004476:exon1:c.C156T:p.D52D	exonic	ENSG00000180708	NA	synonymous SNV	ENSG00000180708:ENST00000314902:exon1:c.C156T:p.D52D	NA	NA	1q23.1	NA	NA	NA	NA	rs34616883	0.3	0.3	0.304	0.280551	0.4592	0.1687	0.2695	0.2186	0.3037	0.48	0.19	0.29	0.18	0.3799	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.433536	NA	NA	0.438256	0.242397	ID=COSM424225;OCCURENCE=1(breast)	0.29	NA	4.3893106
1213	16	88773528	88773528	C	A	intronic	CTU2	NA	NA	NA	UTR5	ENSG00000174177	ENST00000564921:c.-2858C>A	NA	NA	NA	NA	16q24.3	NA	NA	Name=27	NA	rs11641194	0.13	0.13	0.121	0.136581	0.2753	0.0288	0.1614	0.0144	0.2526	0.25	0.01	0.19	0.03	0.2211	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.082647	NA	NA	0.281061	0.056415	NA	0.138	NA	4.3892057
1213	1	37948212	37948212	C	G	intronic	ZC3H12A	NA	NA	NA	intronic	ENSG00000163874	NA	NA	NA	NA	NA	1p34.3	NA	NA	Name=2	NA	rs215205	0.25	0.25	0.271	0.334065	0.3002	0.0585	0.1988	0.5159	0.5031	0.28	0.05	0.23	0.46	0.3109	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.818007	NA	NA	NA	NA	NA	0.37	NA	4.3889
1213	1	75172001	75172001	T	A	exonic	CRYZ	NA	synonymous SNV	CRYZ:NM_001134759:exon7:c.A558T:p.G186G,CRYZ:NM_001130043:exon8:c.A867T:p.G289G,CRYZ:NM_001889:exon9:c.A969T:p.G323G,CRYZ:NM_001130042:exon10:c.A969T:p.G323G	exonic	ENSG00000116791	NA	synonymous SNV	ENSG00000116791:ENST00000370872:exon7:c.A558T:p.G186G,ENSG00000116791:ENST00000370871:exon8:c.A867T:p.G289G,ENSG00000116791:ENST00000340866:exon9:c.A969T:p.G323G,ENSG00000116791:ENST00000417775:exon10:c.A969T:p.G323G	NA	NA	1p31.1	NA	NA	NA	NA	rs7527057	0.26	0.26	0.223	0.216454	0.4592	0.1091	0.3674	0.0348	0.2157	0.44	0.12	0.37	0.05	0.3573	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.320188	NA	NA	0.46127	0.106673	NA	0.232	NA	4.3888966
1213	6	144835040	144835040	T	C	intronic	UTRN	NA	NA	NA	intronic	ENSG00000152818	NA	NA	NA	Score=654;Name=lod=605	NA	6q24.2	NA	NA	NA	NA	rs66905872	0.24	0.24	0.218	0.264776	0.1829	0.1984	0.2925	0.3767	0.2464	0.18	0.2	0.26	0.38	0.2322	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.826039	1.826039	NA	0.196163	0.358148	NA	0.37	NA	4.388737
1213	8	125933052	125933052	T	C	intergenic	MTSS1,LOC157381	dist=192322;dist=21198	NA	NA	ncRNA_exonic	ENSG00000250428	NA	NA	NA	Score=594;Name=lod=345	NA	8q24.13	NA	NA	NA	NA	rs17395997	0.53	0.53	0.536	0.539537	0.6113	0.381	0.3963	0.6135	0.6309	0.62	0.39	0.46	0.61	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.126681	NA	NA	NA	NA	NA	0.457	NA	4.3887
1213	8	99118622	99118622	A	C	intronic	HRSP12	NA	NA	NA	intronic	ENSG00000132541	NA	NA	NA	NA	NA	8q22.2	NA	Name=MafK_(ab50322)	NA	NA	rs2242197	0.24	0.24	0.224	0.212061	0.2942	0.2827	0.2176	0.0575	0.2597	0.3	0.3	0.23	0.09	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.366863	1.366863	NA	0.31741	0.109827	NA	0.174	NA	4.38839
1213	11	65338034	65338034	A	G	intronic	SSSCA1	NA	NA	NA	UTR5	ENSG00000173465	ENST00000531405:c.-133A>G,ENST00000527920:c.-133A>G	NA	NA	NA	NA	11q13.1	NA	Name=GABP,TAF1,GATA-1,YY1_(C-20),Pol2,ATF3,Mxi1_(bHLH),Max,GTF2F1_(RAP-74),FOXA1_(C-20),ELK4,Sin3Ak-20,Pol2-4H8,YY1,c-Myc,HEY1,TBP,USF-1	NA	NA	rs1151496	0.29	0.29	0.27	0.298522	0.2565	0.2133	0.1902	0.4675	0.2781	0.25	0.24	0.23	0.45	0.2538	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.283719	NA	NA	0.267978	0.435484	NA	0.275	NA	4.3883887
1213	1	247348621	247348621	G	C	intergenic	ZNF124,MIR3916	dist=13303;dist=16648	NA	NA	ncRNA_exonic	ENSG00000215795	NA	NA	NA	Score=559;Name=lod=250	NA	1q44	NA	NA	NA	NA	rs3820509	0.58	0.58	0.615	0.585863	0.6123	0.4038	0.5317	0.6694	0.6718	0.62	0.43	0.56	0.69	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.759885	NA	NA	NA	NA	NA	0.696	NA	4.3877
1213	20	2618140	2618140	T	C	exonic	TMC2	NA	synonymous SNV	TMC2:NM_080751:exon19:c.T2406C:p.S802S	exonic	ENSG00000149488	NA	synonymous SNV	ENSG00000149488:ENST00000358864:exon19:c.T2406C:p.S802S	Score=462;Name=lod=101	NA	20p13	NA	NA	NA	NA	rs6083915	0.77	0.77	0.772	0.778954	0.7515	0.8581	0.7983	0.6823	0.8425	0.75	0.86	0.81	0.67	0.7765	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.837687	NA	NA	0.751047	0.700409	NA	0.732	NA	4.3876196
1213	7	150931268	150931268	C	G	exonic	CHPF2	NA	synonymous SNV	CHPF2:NM_019015:exon1:c.C171G:p.S57S	exonic	ENSG00000033100	NA	synonymous SNV	ENSG00000033100:ENST00000035307:exon1:c.C171G:p.S57S,ENSG00000033100:ENST00000495645:exon2:c.C147G:p.S49S	NA	NA	7q36.1	NA	NA	NA	NA	rs2608293	0.48	0.48	0.451	0.448283	0.4493	0.7183	0.4207	0.3207	0.3609	0.45	0.68	0.44	0.31	0.42	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.199469	NA	NA	0.409884	0.340445	NA	0.442	NA	4.3874826
1213	5	179734312	179734312	T	C	intronic	GFPT2	NA	NA	NA	intronic	ENSG00000131459	NA	NA	NA	NA	NA	5q35.3	NA	NA	Name=5	NA	rs3763131	0.21	0.21	0.2	0.218051	0.2147	0.3819	0.219	0.0492	0.2802	0.23	0.35	0.21	0.03	0.2066	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.15127	NA	NA	0.191289	0.071858	NA	0.167	NA	4.387411
1213	14	73733410	73733410	A	G	intronic	PAPLN	NA	NA	NA	intronic	ENSG00000100767	NA	NA	NA	NA	NA	14q24.2	NA	Name=CTCF	NA	NA	rs909216	0.36	0.36	0.334	0.338259	0.1869	0.6885	0.3833	0.2421	0.2311	0.17	0.67	0.37	0.29	0.2534	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.06558	NA	NA	0.172791	0.227417	NA	0.29	NA	4.386909
1213	17	27904711	27904711	G	A	exonic	GIT1	NA	synonymous SNV	GIT1:NM_014030:exon10:c.C933T:p.A311A,GIT1:NM_001085454:exon11:c.C960T:p.A320A	exonic	ENSG00000108262	NA	synonymous SNV	ENSG00000108262:ENST00000585148:exon4:c.C216T:p.A72A,ENSG00000108262:ENST00000225394:exon10:c.C933T:p.A311A,ENSG00000108262:ENST00000579937:exon10:c.C933T:p.A311A,ENSG00000108262:ENST00000394869:exon11:c.C960T:p.A320A,ENSG00000108262:ENST00000581348:exon11:c.C960T:p.A320A	NA	NA	17q11.2	NA	NA	NA	NA	rs11080105	0.41	0.41	0.393	0.385982	0.4284	0.6845	0.3876	0.0673	0.4642	0.44	0.69	0.36	0.07	0.421	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.317151	1.317151	NA	0.430465	0.129369	NA	0.406	NA	4.3868016
1213	20	44374747	44374747	C	T	intergenic	SPINT4,WFDC3	dist=20412;dist=28100	NA	NA	ncRNA_exonic	ENSG00000226188	NA	NA	NA	Score=479;Name=lod=118	NA	20q13.12	NA	NA	NA	NA	rs454402	0.54	0.54	0.507	0.5	0.6133	0.5268	0.6787	0.3525	0.4284	0.64	0.52	0.66	0.34	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.384574	NA	NA	NA	NA	NA	0.558	NA	4.3867
1213	17	39081713	39081713	A	G	exonic	KRT23	NA	synonymous SNV	KRT23:NM_015515:exon7:c.T1035C:p.H345H	exonic	ENSG00000108244	NA	synonymous SNV	ENSG00000108244:ENST00000436344:exon6:c.T624C:p.H208H,ENSG00000108244:ENST00000209718:exon7:c.T1035C:p.H345H	NA	NA	17q21.2	NA	NA	NA	NA	rs8037	0.55	0.55	0.54	0.570887	0.4056	0.7083	0.6081	0.5643	0.5818	0.4	0.74	0.56	0.55	0.4813	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.441852	NA	NA	0.393256	0.534271	NA	0.551	NA	4.3865106
1213	22	38889657	38889657	C	T	intronic	DDX17	NA	NA	NA	intronic	ENSG00000100201	NA	NA	NA	NA	NA	22q13.1	NA	NA	Name=12	NA	rs2267390	0.29	0.29	0.289	0.254193	0.3042	0.3532	0.1974	0.1634	0.2638	0.32	0.38	0.22	0.18	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.091071	NA	NA	0.309554	0.175578	NA	0.261	NA	4.386246
1213	16	52689513	52689513	A	G	intergenic	LOC643714,CHD9	dist=48626;dist=399432	NA	NA	ncRNA_exonic	ENSG00000234337	NA	NA	NA	Score=766;Name=lod=1735	NA	16q12.2	NA	NA	NA	NA	rs9925027	0.71	0.71	0.686	0.70028	0.6143	0.8274	0.7666	0.6263	0.7106	0.62	0.85	0.72	0.66	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.326772	NA	NA	NA	NA	NA	0.471	NA	4.3857
1213	20	20037222	20037222	T	C	intronic	C20orf26	NA	NA	NA	intronic	ENSG00000089101	NA	NA	NA	NA	NA	20p11.23	NA	Name=EBF	NA	NA	rs1509573	0.72	0.72	0.712	0.701478	0.6143	0.9375	0.755	0.6195	0.6207	0.62	0.94	0.72	0.62	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.169397	NA	NA	NA	NA	NA	0.667	NA	4.3857
1213	7	106826439	106826439	G	A	intronic	HBP1	NA	NA	NA	intronic	ENSG00000105856	NA	NA	NA	NA	NA	7q22.3	NA	NA	Name=14	NA	rs7794965	0.15	0.15	0.144	0.141573	0.2018	0.1597	0.121	0.062	0.183	0.21	0.15	0.14	0.05	0.188	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.419036	NA	NA	0.224556	0.073474	NA	0.072	NA	4.385644
1214	4	154624656	154624656	T	C	exonic	TLR2	NA	synonymous SNV	TLR2:NM_003264:exon3:c.T597C:p.N199N	exonic	ENSG00000137462	NA	synonymous SNV	ENSG00000137462:ENST00000260010:exon1:c.T597C:p.N199N	NA	NA	4q31.3	NA	NA	NA	NA	rs3804099	0.43	0.43	0.445	0.414736	0.4354	0.2827	0.3329	0.6354	0.2894	0.44	0.28	0.35	0.65	0.4113	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.074035	NA	NA	0.435116	0.610985	NA	0.5	NA	4.3848506
1214	5	29848890	29848890	G	A	intergenic	LSP1P3,CDH6	dist=921470;dist=1344872	NA	NA	ncRNA_exonic	ENSG00000249744	NA	NA	NA	Score=452;Name=lod=92	NA	5p13.3	NA	NA	NA	NA	rs10068185	0.37	0.37	0.331	0.348243	0.6153	0.2391	0.3285	0.2073	0.3906	0.62	0.2	0.38	0.19	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.751911	NA	NA	NA	NA	NA	0.29	NA	4.3847
1214	17	62232073	62232073	A	T	intronic	TEX2	NA	NA	NA	intronic	ENSG00000136478	NA	NA	NA	NA	NA	17q23.3	NA	Name=CTCF	NA	NA	rs4968693	0.6	0.6	0.539	0.566094	0.6153	0.7927	0.768	0.2481	0.5685	0.6	0.82	0.74	0.22	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.276568	NA	NA	NA	NA	NA	0.478	NA	4.3847
1214	9	132084885	132084885	A	G	downstream	C9orf106	NA	NA	NA	ncRNA_exonic	ENSG00000179082	NA	NA	NA	NA	NA	9q34.11	NA	Name=CTCF	NA	NA	rs913771	0.87	0.87	0.873	0.869209	0.7823	0.9048	0.8934	0.9675	0.772	0.78	0.91	0.87	0.95	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.460656	NA	NA	NA	NA	NA	0.877	NA	4.3843666
1214	7	64254901	64254901	T	C	UTR5	ZNF138	NM_006524:c.-46T>C,NM_001271649:c.-37161T>C,NM_001160183:c.-46T>C,NM_001271640:c.-46T>C,NM_001271638:c.-20410T>C,NM_001271637:c.-46T>C,NM_001271639:c.-46T>C	NA	NA	UTR5	ENSG00000197008	ENST00000307355:c.-46T>C,ENST00000359735:c.-21094T>C,ENST00000440155:c.-46T>C,ENST00000494380:c.-46T>C,ENST00000437743:c.-20410T>C,ENST00000440598:c.-46T>C	NA	NA	NA	NA	7q11.21	NA	Name=SETDB1,c-Myc,HEY1,TBP,Pol2(b),Sin3Ak-20,Pol2-4H8,ZNF263,Egr-1,NF-YB,Oct-2,CTCF,POU2F2,E2F4,GABP,E2F6_(H-50),TAF1,TAF7_(SQ-8),BCLAF1_(M33-P5B11),YY1_(C-20),Pol2,Pol2(phosphoS2),TCF4	Name=148	NA	rs11983033	0.76	0.76	0.771	0.777556	0.6352	0.8403	0.6772	0.9425	0.7076	0.65	0.82	0.66	0.94	0.6819	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.189227	NA	NA	0.631992	0.896676	NA	0.667	NA	4.3842414
1214	6	38843426	38843426	C	T	exonic	DNAH8	NA	synonymous SNV	DNAH8:NM_001206927:exon53:c.C7680T:p.V2560V	exonic	ENSG00000124721	NA	synonymous SNV	ENSG00000124721:ENST00000441566:exon48:c.C6921T:p.V2307V,ENSG00000124721:ENST00000359357:exon51:c.C7029T:p.V2343V,ENSG00000124721:ENST00000327475:exon52:c.C7644T:p.V2548V,ENSG00000124721:ENST00000449981:exon53:c.C7680T:p.V2560V	NA	NA	6p21.2	NA	NA	NA	NA	rs6458080	0.53	0.53	0.519	0.534345	0.3767	0.8333	0.6138	0.3638	0.5624	0.38	0.83	0.57	0.4	0.478	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.327234	NA	NA	0.42814	0.364957	NA	0.601	NA	4.3838266
1214	10	19340959	19340959	G	C	intergenic	ARL5B,PLXDC2	dist=374019;dist=764413	NA	NA	ncRNA_exonic	ENSG00000226255	NA	NA	NA	Score=674;Name=lod=732	NA	10p12.31	NA	NA	NA	NA	rs1934050	0.7	0.7	0.73	0.74381	0.6163	0.749	0.585	0.9054	0.7638	0.63	0.71	0.57	0.89	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.44476	NA	NA	NA	NA	NA	0.623	NA	4.3837
1214	17	10363410	10363410	A	G	exonic	MYH4	NA	synonymous SNV	MYH4:NM_017533:exon14:c.T1275C:p.N425N	exonic	ENSG00000264424	NA	synonymous SNV	ENSG00000264424:ENST00000255381:exon14:c.T1275C:p.N425N	NA	NA	17p13.1	NA	NA	NA	NA	rs3744561	0.52	0.52	0.498	0.535543	0.3708	0.8601	0.5245	0.3442	0.637	0.38	0.87	0.51	0.33	0.4949	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.040414	NA	NA	0.417442	0.359737	NA	0.594	NA	4.3835246
1214	19	7986685	7986685	G	A	intronic	SNAPC2	NA	NA	NA	intronic	ENSG00000104976	NA	NA	NA	NA	NA	19p13.2	NA	Name=Pol2,ZNF263,USF-1	NA	NA	rs7250749	0.2	0.2	0.164	0.186102	0.2008	0.0853	0.4193	0.2284	0.0521	0.19	0.1	0.39	0.19	0.2205	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.119403	NA	NA	0.195278	0.233318	NA	0.174	NA	4.383422
1214	17	7999957	7999957	G	A	exonic	ALOXE3	NA	synonymous SNV	ALOXE3:NM_001165960:exon16:c.C2520T:p.S840S,ALOXE3:NM_021628:exon16:c.C2124T:p.S708S	exonic	ENSG00000179148	NA	synonymous SNV	ENSG00000179148:ENST00000380149:exon15:c.C2592T:p.S864S,ENSG00000179148:ENST00000318227:exon16:c.C2520T:p.S840S,ENSG00000179148:ENST00000448843:exon16:c.C2124T:p.S708S	NA	NA	17p13.1	NA	NA	NA	NA	rs3809881	0.46	0.46	0.41	0.42472	0.4205	0.6022	0.5735	0.2504	0.3763	0.42	0.62	0.56	0.28	0.4464	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.146929	NA	NA	0.416395	0.274852	ID=COSM437813,COSM1480179;OCCURENCE=1(breast)	0.384	NA	4.3833716
1214	8	12231884	12231884	C	T	ncRNA_intronic	FAM66A	NA	NA	NA	ncRNA_exonic	ENSG00000254423	NA	NA	NA	NA	NA	8p23.1	NA	NA	NA	NA	rs2684056	0.2	0.2	0.203	0.215455	0.2833	0.3036	0.1801	0.0514	0.3016	0.25	0.27	0.19	0.04	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.66466	NA	NA	NA	NA	NA	0.181	NA	4.3833666
1214	15	76032145	76032145	T	C	ncRNA_intronic	DNM1P35	NA	NA	NA	ncRNA_intronic	ENSG00000260288	NA	NA	NA	NA	NA	15q24.2	NA	NA	NA	NA	rs28651447	0.25	0.25	0.197	0.254792	0.2833	0.2371	0.3545	0.2224	0.2168	0.29	0.2	0.32	0.22	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.61187	NA	NA	NA	NA	NA	0.37	NA	4.3833666
1214	15	76032239	76032239	A	G	ncRNA_intronic	DNM1P35	NA	NA	NA	ncRNA_intronic	ENSG00000260288	NA	NA	NA	NA	NA	15q24.2	NA	NA	NA	NA	rs28688252	0.25	0.25	0.204	0.254792	0.2833	0.2371	0.3545	0.2224	0.2168	0.29	0.2	0.32	0.22	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.365821	NA	NA	NA	NA	NA	0.37	NA	4.3833666
1214	19	43359785	43359785	T	C	ncRNA_exonic	PSG10P	NA	NA	NA	ncRNA_exonic	ENSG00000248257	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs111653171	0.11	0.11	0.08	0.0996406	0.1501	0.003	0.2176	0.0537	0.1258	0.16	0.0017	0.2	0.08	0.1335	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.303205	NA	NA	NA	NA	NA	0.174	NA	4.3830666
1214	10	105792077	105792077	A	G	intronic	COL17A1	NA	NA	NA	intronic	ENSG00000065618	NA	NA	NA	NA	NA	10q24.33	NA	NA	Name=6	NA	rs805688	0.24	0.24	0.249	0.277756	0.1948	0.1528	0.2406	0.447	0.2894	0.2	0.13	0.23	0.45	0.2263	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.586686	NA	NA	0.196047	0.383114	NA	0.21	NA	4.382853
1214	1	165533075	165533075	C	T	ncRNA_UTR3	LRRC52	NA	NA	NA	ncRNA_UTR3	ENSG00000162763	NA	NA	NA	NA	NA	1q24.1	NA	NA	NA	NA	rs6676948	0.07	0.07	0.072	0.0605032	0.1034	NA	0.0634	0.1074	0.0133	0.1	NA	0.06	0.1	0.0753	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.480181	NA	NA	0.105116	0.092601	NA	0.058	NA	4.3828506
1214	16	21082168	21082168	C	T	intronic	DNAH3	NA	NA	NA	intronic	ENSG00000158486	NA	NA	NA	NA	NA	16p12.3	NA	Name=USF2	NA	NA	rs704554	0.29	0.29	0.298	0.259185	0.2058	0.4623	0.2118	0.2474	0.1544	0.2	0.47	0.2	0.27	0.2208	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.499071	NA	NA	0.190698	0.229214	NA	0.217	NA	4.382702
1214	6	106987161	106987161	A	G	intronic	AIM1	NA	NA	NA	intronic	ENSG00000112297	NA	NA	NA	NA	NA	6q21	NA	Name=MafK_(ab50322)	NA	NA	rs783397	0.71	0.71	0.692	0.666933	0.6173	0.877	0.7061	0.587	0.5818	0.62	0.9	0.7	0.63	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.730921	NA	NA	NA	NA	NA	0.688	NA	4.3827
1214	17	3793843	3793843	T	C	intronic	CAMKK1	NA	NA	NA	intronic	ENSG00000004660	NA	NA	NA	NA	NA	17p13.2	NA	Name=BAF155,ZNF263	NA	NA	rs11657386	0.67	0.67	0.667	0.666134	0.6173	0.8145	0.6383	0.6044	0.6667	0.62	0.82	0.62	0.61	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.550394	NA	NA	NA	NA	NA	0.645	NA	4.3827
1214	19	7166109	7166109	A	G	intronic	INSR	NA	NA	NA	intronic	ENSG00000171105	NA	NA	NA	NA	Name=Polycystic ovary syndrome	19p13.2	NA	NA	NA	NA	rs2059807	0.55	0.55	0.583	0.614617	0.6173	0.3671	0.4769	0.823	0.683	0.6	0.29	0.49	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.36692	NA	NA	NA	NA	NA	0.609	NA	4.3827
1214	4	15937526	15937526	G	A	UTR3	FGFBP1	NM_005130:c.*25C>T	NA	NA	UTR3	ENSG00000137440	ENST00000382333:c.*25C>T,ENST00000259988:c.*25C>T	NA	NA	NA	NA	4p15.32	NA	NA	Name=22	NA	rs1042510	0.23	0.23	0.222	0.28774	0.3171	0.0486	0.2608	0.3139	0.4877	0.3	0.05	0.3	0.29	0.3091	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.471782	NA	NA	0.324651	0.312755	NA	0.362	NA	4.3824824
1214	14	52907353	52907353	C	T	exonic	TXNDC16	NA	synonymous SNV	TXNDC16:NM_001160047:exon19:c.G1917A:p.Q639Q,TXNDC16:NM_020784:exon19:c.G1932A:p.Q644Q	exonic	ENSG00000087301	NA	synonymous SNV	ENSG00000087301:ENST00000281741:exon19:c.G1932A:p.Q644Q	NA	NA	14q22.1	NA	NA	NA	NA	rs1952254	0.51	0.51	0.506	0.536542	0.4026	0.7054	0.4308	0.5129	0.6074	0.4	0.66	0.44	0.55	0.4715	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.008686	NA	NA	0.410403	0.518611	NA	0.565	NA	4.3821636
1214	3	49719729	49719729	G	A	intronic	APEH	NA	NA	NA	intronic	ENSG00000164062	NA	NA	NA	NA	Name=Ulcerative colitis	3p21.31	NA	NA	NA	NA	rs9822268	0.24	0.24	0.217	0.208866	0.3241	0.0565	0.1729	0.2632	0.1994	0.33	0.06	0.23	0.3	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.1029	NA	NA	0.294192	0.254464	ID=COSN166886;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.312	NA	4.381708
1214	10	96769654	96769654	A	G	intergenic	CYP2C9,CYP2C8	dist=20506;dist=26875	NA	NA	downstream	ENSG00000260863	NA	NA	NA	NA	NA	10q23.33	NA	Name=MafK_(ab50322)	NA	NA	rs55753924	0.06	0.06	0.048	0.0457268	0.1183	0.001	0.0994	0.0083	0.0297	0.11	0.0035	0.13	0.01	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.338705	NA	NA	NA	NA	NA	0.094	NA	4.3817
1214	18	14147526	14147526	A	G	intergenic	ZNF519,ANKRD20A5P	dist=15037;dist=31570	NA	NA	ncRNA_intronic	ENSG00000267324	NA	NA	NA	Score=611;Name=lod=404	NA	18p11.21	NA	NA	NA	NA	rs8085145	0.66	0.66	0.617	0.629393	0.6183	0.8433	0.6542	0.5242	0.545	0.61	0.85	0.65	0.51	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.285199	NA	NA	NA	NA	NA	0.58	NA	4.3817
1214	19	53367338	53367338	G	A	intergenic	ZNF468,ZNF320	dist=6436;dist=12087	NA	NA	exonic	ENSG00000182986	NA	nonsynonymous SNV	ENSG00000182986:ENST00000597909:exon6:c.C298T:p.R100C	NA	NA	19q13.41	NA	NA	NA	NA	rs4803014	0.14	0.14	0.121	0.116813	0.2594	0.0367	0.1628	0.0408	0.1227	0.23	0.05	0.21	0.04	0.1924	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.66977	NA	NA	NA	NA	NA	0.225	NA	4.3815334
1214	11	396701	396701	C	T	intronic	PKP3	NA	NA	NA	intronic	ENSG00000184363	NA	NA	NA	NA	NA	11p15.5	NA	Name=CTCF,Rad21,CTCF_(SC-5916),HDAC2_(SC-6296),CTCF_(C-20)	Name=65	NA	rs11246147	0.43	0.43	0.401	0.446885	0.5467	0.4325	0.4769	0.2897	0.5501	0.53	0.41	0.46	0.26	0.5221	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.491468	NA	NA	0.549791	0.340091	NA	0.413	NA	4.381409
1214	19	17312992	17312992	C	T	exonic	MYO9B	NA	synonymous SNV	MYO9B:NM_001130065:exon28:c.C4716T:p.V1572V,MYO9B:NM_004145:exon28:c.C4716T:p.V1572V	exonic	ENSG00000099331	NA	synonymous SNV	ENSG00000099331:ENST00000397274:exon27:c.C4716T:p.V1572V,ENSG00000099331:ENST00000595641:exon27:c.C4716T:p.V1572V,ENSG00000099331:ENST00000594824:exon28:c.C4716T:p.V1572V,ENSG00000099331:ENST00000595618:exon28:c.C4716T:p.V1572V	NA	NA	19p13.11	NA	NA	NA	NA	rs2305765	0.58	0.58	0.562	0.600439	0.3897	0.746	0.6729	0.5991	0.6176	0.4	0.78	0.64	0.58	0.5004	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.910692	NA	NA	0.395252	0.54003	NA	0.645	NA	4.3813146
1214	4	2906453	2906453	T	G	intronic	ADD1	NA	NA	NA	intronic	ENSG00000087274	NA	NA	NA	NA	NA	4p16.3	Score=849;Name=V$HAND1E47_01	NA	NA	NA	rs2239728	0.28	0.28	0.272	0.241414	0.2087	0.4544	0.1758	0.1687	0.2004	0.22	0.51	0.19	0.17	0.2136	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.261872	2.261872	NA	0.196512	0.177712	NA	0.341	NA	4.381188
1214	2	44393609	44393609	G	A	intergenic	LRPPRC,PPM1B	dist=170465;dist=2391	NA	NA	ncRNA_exonic	ENSG00000224637	NA	NA	NA	Score=596;Name=lod=351	NA	2p21	NA	NA	NA	NA	rs7567874	0.56	0.56	0.519	0.548722	0.6193	0.5585	0.6988	0.3268	0.6595	0.63	0.57	0.71	0.32	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.465169	NA	NA	NA	NA	NA	0.5	NA	4.3807
1214	9	37477283	37477283	A	T	intergenic	ZBTB5,POLR1E	dist=11876;dist=8662	NA	NA	ncRNA_exonic	ENSG00000187988	NA	NA	NA	Score=500;Name=lod=144	NA	9p13.2	NA	NA	NA	NA	rs10814542	0.55	0.55	0.533	0.525759	0.6193	0.7083	0.4914	0.2352	0.6585	0.61	0.71	0.53	0.27	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.487499	1.487499	NA	NA	NA	NA	0.572	NA	4.3807
1214	10	82476615	82476615	A	T	intergenic	SH2D4B,NRG3	dist=70299;dist=1158455	NA	NA	ncRNA_exonic	ENSG00000233353	NA	NA	NA	Score=760;Name=lod=1642	NA	10q23.1	NA	NA	NA	NA	rs4454661	0.49	0.49	0.512	0.489217	0.6193	0.1905	0.5778	0.5461	0.5235	0.63	0.19	0.6	0.56	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.222486	NA	NA	NA	NA	NA	0.543	NA	4.3807
1214	12	27059149	27059149	C	T	intronic	ASUN	NA	NA	NA	intronic	ENSG00000064102	NA	NA	NA	NA	NA	12p11.23	NA	Name=MafK_(ab50322),MafF_(M8194),MafK_(SC-477)	NA	NA	rs1488053	0.69	0.69	0.69	0.682308	0.6193	0.9494	0.5749	0.621	0.6309	0.63	0.94	0.54	0.62	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.888474	NA	NA	NA	NA	NA	0.471	NA	4.3807
1214	17	38188844	38188844	A	G	intronic	MED24	NA	NA	NA	intronic	ENSG00000008838	NA	NA	NA	NA	NA	17q21.1	NA	NA	Name=3	NA	rs7502514	0.63	0.63	0.634	0.64976	0.6193	0.5625	0.6729	0.6747	0.7209	0.62	0.57	0.67	0.69	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.045916	NA	NA	NA	NA	NA	0.659	NA	4.3807
1214	20	61143364	61143364	T	C	ncRNA_exonic	C20orf166-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000174403	NA	NA	NA	NA	NA	20q13.33	NA	NA	NA	NA	rs12625668	0.3	0.3	0.264	0.28115	0.2863	0.4613	0.3386	0.0862	0.3129	0.3	0.46	0.3	0.13	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.265534	NA	NA	NA	NA	NA	0.232	NA	4.3803666
1214	12	6127943	6127943	A	G	exonic	VWF	NA	synonymous SNV	VWF:NM_000552:exon28:c.T4641C:p.T1547T	exonic	ENSG00000110799	NA	synonymous SNV	ENSG00000110799:ENST00000261405:exon28:c.T4641C:p.T1547T	NA	NA	12p13.31	NA	NA	NA	NA	rs216310	0.7	0.7	0.648	0.776558	0.6014	0.746	0.7752	0.9221	0.7924	0.55	0.71	0.73	0.9	0.6852	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.489708	NA	NA	NA	NA	NA	0.739	NA	4.3800666
1214	10	104157711	104157711	T	G	intronic	NFKB2	NA	NA	NA	intronic	ENSG00000077150	NA	NA	NA	NA	NA	10q24.32	NA	Name=CEBPB	NA	NA	rs7897947	0.28	0.28	0.28	0.291334	0.1889	0.3681	0.2104	0.3752	0.2618	0.19	0.36	0.19	0.39	0.2351	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.184422	NA	NA	0.195985	0.35255	NA	0.275	NA	4.380015
1214	8	30841331	30841331	C	T	intergenic	TEX15,PURG	dist=134798;dist=11990	NA	NA	ncRNA_exonic	ENSG00000253793	NA	NA	NA	Score=715;Name=lod=1069	NA	8p12	NA	NA	NA	NA	rs2080720	0.77	0.77	0.766	0.738419	0.6203	0.9494	0.7392	0.8215	0.5297	0.63	0.95	0.73	0.8	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.106636	NA	NA	NA	NA	NA	0.717	NA	4.3797
1214	22	16906273	16906273	A	C	intergenic	OR11H1,CCT8L2	dist=456469;dist=165375	NA	NA	ncRNA_exonic	ENSG00000229658	NA	NA	NA	Score=745;Name=lod=1427	NA	22q11.1	NA	NA	NA	NA	rs3876018	0.68	0.68	0.705	0.726438	0.6203	0.7063	0.5648	0.9312	0.6943	0.61	0.69	0.53	0.9	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.153247	NA	NA	NA	NA	NA	0.036	NA	4.3797
1214	7	124387374	124387374	A	G	exonic	GPR37	NA	synonymous SNV	GPR37:NM_005302:exon2:c.T1047C:p.T349T	exonic	ENSG00000170775	NA	synonymous SNV	ENSG00000170775:ENST00000303921:exon2:c.T1047C:p.T349T	Score=463;Name=lod=102	NA	7q31.33	NA	NA	NA	NA	rs724356	0.74	0.74	0.713	0.71865	0.7565	0.998	0.8242	0.3427	0.8252	0.77	1	0.78	0.37	0.7707	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.208716	NA	NA	0.759767	0.431684	NA	0.63	NA	4.3796996
1214	3	49739086	49739086	C	T	intronic	RNF123	NA	NA	NA	intronic	ENSG00000164068	NA	NA	NA	NA	NA	3p21.31	NA	Name=CTCF,Rad21,CTCF_(C-20)	Name=17	NA	rs1491986	0.6	0.6	0.547	0.585463	0.5249	0.8304	0.6455	0.3737	0.6391	0.54	0.82	0.66	0.42	0.581	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.571181	NA	NA	0.514535	0.411484	NA	0.638	NA	4.379565
1214	19	35979696	35979696	C	T	intronic	KRTDAP	NA	NA	NA	intronic	ENSG00000188508	NA	NA	NA	NA	NA	19q13.12	NA	Name=USF1_(SC-8983),USF-1	NA	NA	rs10410228	0.13	0.13	0.119	0.122604	0.2227	0.0109	0.111	0.1293	0.1339	0.21	0.01	0.12	0.15	0.1757	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.758515	NA	NA	0.222209	0.136859	NA	0.13	NA	4.379391
1214	12	123645803	123645803	G	A	exonic	MPHOSPH9	NA	synonymous SNV	MPHOSPH9:NM_022782:exon18:c.C2805T:p.Y935Y	exonic	ENSG00000051825	NA	synonymous SNV	ENSG00000051825:ENST00000302349:exon18:c.C2805T:p.Y935Y,ENSG00000051825:ENST00000392425:exon18:c.C2805T:p.Y935Y,ENSG00000051825:ENST00000541076:exon20:c.C3171T:p.Y1057Y,ENSG00000051825:ENST00000606320:exon22:c.C3261T:p.Y1087Y	NA	NA	12q24.31	NA	NA	Name=22	NA	rs1051431	0.68	0.68	0.639	0.633187	0.7684	0.9772	0.7262	0.1415	0.7382	0.77	0.98	0.72	0.17	0.7332	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.753235	1.753235	NA	0.785698	0.255561	NA	0.609	NA	4.3793686
1214	7	35208929	35208929	T	C	ncRNA_intronic	DPY19L2P1	NA	NA	NA	ncRNA_exonic	ENSG00000236592	NA	NA	NA	NA	NA	7p14.2	NA	NA	NA	NA	rs142266902	0.2	0.2	0.141	0.208067	0.2873	0.1528	0.2536	0.1596	0.2168	0.24	0.14	0.21	0.18	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.230047	NA	NA	NA	NA	NA	0.159	NA	4.3793666
1214	5	171800897	171800897	A	G	intronic	SH3PXD2B	NA	NA	NA	intronic	ENSG00000174705	NA	NA	NA	NA	NA	5q35.1	NA	NA	Name=5	NA	rs2731717	0.43	0.43	0.415	0.436302	0.3062	0.6617	0.4481	0.3994	0.3793	0.3	0.63	0.38	0.41	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.705263	NA	NA	0.314582	0.398121	NA	0.391	NA	4.379218
1214	7	142099512	142099512	T	G	intergenic	LOC730441,MTRNR2L6	dist=127444;dist=274619	NA	NA	exonic	ENSG00000229200	NA	nonsynonymous SNV	ENSG00000229200:ENST00000390359:exon2:c.A290C:p.K97T	NA	NA	7q34	NA	NA	NA	NA	rs373830246	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4546	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.177869	NA	0.15	NA	NA	NA	NA	NA	4.3787334
1214	1	79383458	79383458	A	T	intronic	ELTD1	NA	NA	NA	intronic	ENSG00000162618	NA	NA	NA	NA	NA	1p31.1	NA	NA	Name=2	NA	rs12569007	0.63	0.63	0.589	0.636182	0.6213	0.7044	0.6974	0.5431	0.6636	0.62	0.72	0.69	0.51	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.990185	NA	NA	NA	NA	NA	0.638	NA	4.3787
1214	18	21252592	21252592	A	G	intergenic	ANKRD29,LAMA3	dist=9743;dist=16970	NA	NA	ncRNA_exonic	ENSG00000267752	NA	NA	NA	Score=733;Name=lod=1274	NA	18q11.2	NA	NA	NA	NA	rs12962228	0.39	0.39	0.375	0.364617	0.6213	0.2103	0.3977	0.2118	0.4427	0.61	0.22	0.44	0.22	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.266498	1.266498	NA	NA	NA	NA	0.457	NA	4.3787
1214	19	49528937	49528937	T	C	intergenic	CGB,SNAR-G2	dist=1305;dist=5989	NA	NA	ncRNA_exonic	ENSG00000267019	NA	NA	NA	Score=505;Name=lod=151	NA	19q13.33	NA	NA	NA	NA	rs4802537	0.56	0.56	0.533	0.560304	0.6213	0.3829	0.6383	0.6241	0.5389	0.61	0.37	0.6	0.66	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.370356	NA	NA	NA	NA	NA	0.616	NA	4.3787
1214	3	75386297	75386297	G	A	intergenic	MIR4444-1,FAM86DP	dist=122598;dist=84406	NA	NA	ncRNA_exonic	ENSG00000228868	NA	NA	NA	Score=599;Name=lod=362	NA	3p12.3	NA	NA	NA	NA	rs6769147	0.45	0.45	0.443	0.414736	0.6223	0.4444	0.4467	0.1369	0.5235	0.62	0.47	0.49	0.15	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.92284	NA	NA	NA	NA	NA	0.486	NA	4.3777
1214	9	14068852	14068852	G	A	intergenic	LINC00583,NFIB	dist=123246;dist=12990	NA	NA	upstream	ENSG00000213954	NA	NA	NA	NA	NA	9p23	NA	Name=CTCF,Rad21,CTCF_(C-20)	NA	NA	rs73407797	0.14	0.14	0.15	0.159944	0.1223	0.002	0.1268	0.3888	0.0757	0.1	NA	0.1	0.4	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.061362	NA	NA	NA	NA	NA	0.232	NA	4.3777
1214	22	42969877	42969877	G	A	ncRNA_exonic	RRP7B	NA	NA	NA	ncRNA_exonic	ENSG00000182841	NA	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs137054	0.56	0.56	0.57	0.583466	0.2893	0.7619	0.366	0.8722	0.4663	0.3	0.72	0.41	0.86	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.813217	NA	NA	NA	NA	NA	0.391	NA	4.3773666
1214	6	32032743	32032743	G	A	exonic	TNXB	NA	synonymous SNV	TNXB:NM_019105:exon19:c.C6696T:p.D2232D	exonic	ENSG00000168477	NA	synonymous SNV	ENSG00000168477:ENST00000375244:exon19:c.C6696T:p.D2232D,ENSG00000168477:ENST00000375247:exon19:c.C6696T:p.D2232D	NA	NA	6p21.33	NA	NA	NA	NA	rs204883	0.43	0.43	0.403	0.398762	0.4463	0.4772	0.4697	0.2224	0.4571	0.46	0.48	0.48	0.27	0.4401	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.394176	NA	NA	0.403543	0.267145	NA	0.471	NA	4.3767236
1214	1	119157490	119157490	A	G	intergenic	SPAG17,TBX15	dist=429642;dist=268176	NA	NA	ncRNA_exonic	ENSG00000226126	NA	NA	NA	Score=838;Name=lod=3396	NA	1p12	NA	NA	NA	NA	rs1742856	0.63	0.63	0.633	0.625	0.6233	0.4385	0.6643	0.8306	0.5133	0.62	0.47	0.65	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.248209	NA	NA	NA	NA	NA	0.79	NA	4.3767
1214	16	77317756	77317756	G	A	UTR3	ADAMTS18	NM_199355:c.*97C>T	NA	NA	ncRNA_UTR3	ENSG00000140873	NA	NA	NA	NA	NA	16q23.1	NA	NA	NA	NA	rs889707	0.17	0.17	0.171	0.170927	0.1233	0.2004	0.1167	0.2489	0.1227	0.11	0.17	0.14	0.26	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.253426	NA	NA	NA	NA	NA	0.167	NA	4.3767
1214	19	29282028	29282028	T	C	intergenic	LINC00662,LOC148145	dist=997180;dist=174010	NA	NA	ncRNA_exonic	ENSG00000267799	NA	NA	NA	Score=746;Name=lod=1431	NA	19q12	NA	NA	NA	NA	rs7351076	0.43	0.43	0.395	0.438498	0.6233	0.2808	0.5605	0.2065	0.638	0.62	0.27	0.57	0.23	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.694321	NA	NA	NA	NA	NA	0.413	NA	4.3767
1214	14	55880341	55880341	G	C	downstream	TBPL2	NA	NA	NA	ncRNA_exonic	ENSG00000239199	NA	NA	NA	NA	NA	14q22.3	NA	NA	Name=4	NA	rs1572610	0.88	0.88	0.884	0.916733	0.7903	1	0.8429	0.9796	0.9284	0.78	1	0.81	0.97	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.42451	NA	NA	NA	NA	NA	0.913	NA	4.3763666
1214	3	4767262	4767262	T	C	exonic	ITPR1	NA	synonymous SNV	ITPR1:NM_001168272:exon40:c.T5124C:p.T1708T	exonic	ENSG00000150995	NA	synonymous SNV	ENSG00000150995:ENST00000443694:exon38:c.T5124C:p.T1708T,ENSG00000150995:ENST00000302640:exon40:c.T5124C:p.T1708T,ENSG00000150995:ENST00000354582:exon41:c.T5169C:p.T1723T	Score=449;Name=lod=89	NA	3p26.1	NA	NA	NA	NA	rs7613447	0.56	0.56	0.562	0.512181	0.7873	0.2649	0.6542	0.4289	0.4959	0.79	0.28	0.68	0.46	0.6893	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.543113	NA	NA	0.81407	0.481186	NA	0.681	NA	4.3759966
1214	7	37988589	37988589	C	T	exonic	EPDR1	NA	synonymous SNV	EPDR1:NM_001242948:exon2:c.C234T:p.I78I,EPDR1:NM_017549:exon2:c.C417T:p.I139I	exonic	ENSG00000086289	NA	synonymous SNV	ENSG00000086289:ENST00000199448:exon2:c.C417T:p.I139I,ENSG00000086289:ENST00000425345:exon2:c.C234T:p.I78I,ENSG00000086289:ENST00000559325:exon2:c.C777T:p.I259I,ENSG00000086289:ENST00000476620:exon3:c.C111T:p.I37I	Score=545;Name=lod=219	NA	7p14.1	NA	NA	NA	NA	rs2044831	0.66	0.66	0.626	0.658946	0.7813	0.5933	0.7493	0.5098	0.7382	0.77	0.55	0.76	0.52	0.7415	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.503373	1.503373	NA	0.76814	0.564231	ID=COSM1450599;OCCURENCE=1(large_intestine)	0.725	NA	4.3757266
1214	1	26665991	26665991	C	G	intronic	AIM1L	NA	NA	NA	intronic	ENSG00000176092	NA	NA	NA	NA	NA	1p36.11	NA	Name=ELF1_(SC-631)	NA	NA	rs6675432	0.48	0.48	0.384	0.478634	0.6243	0.2014	0.4251	0.6218	0.4591	0.62	0.22	0.45	0.6	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.187648	NA	NA	NA	NA	NA	0.471	NA	4.3757
1214	1	220488972	220488972	A	T	intergenic	RAB3GAP2,MARK1	dist=43129;dist=212596	NA	NA	upstream	ENSG00000230318	NA	NA	NA	Score=678;Name=lod=758	NA	1q41	NA	NA	NA	NA	rs1397960	0.22	0.22	0.235	0.227436	0.1243	0.2758	0.1729	0.3457	0.1626	0.12	0.3	0.13	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.282167	NA	NA	NA	NA	NA	0.261	NA	4.3757
1214	10	120692236	120692236	C	T	intergenic	CACUL1,NANOS1	dist=177478;dist=96992	NA	NA	ncRNA_exonic	ENSG00000213574	NA	NA	NA	Score=468;Name=lod=106	NA	10q26.11	NA	NA	NA	NA	rs1831018	0.52	0.52	0.5	0.473442	0.6243	0.5992	0.5749	0.1793	0.5143	0.64	0.58	0.61	0.2	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.60416	1.60416	NA	NA	NA	NA	0.558	NA	4.3757
1214	19	15774975	15774975	G	T	intergenic	CYP4F3,CYP4F12	dist=3405;dist=8853	NA	NA	ncRNA_intronic	ENSG00000267241	NA	NA	NA	Score=346;Name=lod=34	NA	19p13.12	NA	NA	NA	NA	rs7252223	0.72	0.72	0.701	0.716054	0.6243	0.8185	0.7291	0.764	0.6309	0.63	0.82	0.71	0.75	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.250787	NA	NA	NA	NA	NA	0.652	NA	4.3757
1214	12	104044241	104044241	G	A	intronic	STAB2	NA	NA	NA	intronic	ENSG00000136011	NA	NA	NA	NA	NA	12q23.3	NA	NA	Name=5	NA	rs12829198	0.22	0.22	0.209	0.248203	0.1849	0.2907	0.2248	0.1551	0.4121	0.18	0.31	0.23	0.17	0.24	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.756316	NA	NA	0.199651	0.150477	ID=COSN164350;OCCURENCE=1(breast)	0.225	NA	4.375449
1215	17	40010979	40010979	G	A	exonic	KLHL11	NA	synonymous SNV	KLHL11:NM_018143:exon2:c.C1140T:p.Y380Y	exonic	ENSG00000178502	NA	synonymous SNV	ENSG00000178502:ENST00000319121:exon2:c.C1140T:p.Y380Y	Score=573;Name=lod=285	NA	17q21.2	NA	NA	NA	NA	rs3744782	0.76	0.76	0.755	0.778554	0.7396	0.8313	0.8631	0.7057	0.8027	0.73	0.83	0.83	0.69	0.7823	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.315991	NA	NA	0.769767	0.726509	NA	0.783	NA	4.3749996
1215	10	30982526	30982526	T	G	intergenic	LYZL2,ZNF438	dist=63879;dist=151039	NA	NA	ncRNA_exonic	ENSG00000234814	NA	NA	NA	Score=566;Name=lod=267	NA	10p11.23	NA	NA	NA	NA	rs7068784	0.46	0.46	0.44	0.480032	0.6252	0.3968	0.5144	0.2821	0.6595	0.59	0.41	0.54	0.25	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.600611	2.600611	NA	NA	NA	NA	0.384	NA	4.3748
1215	20	258865	258865	A	G	intronic	C20orf96	NA	NA	NA	intronic	ENSG00000196476	NA	NA	NA	NA	NA	20p13	NA	NA	Name=2	NA	rs6046492	0.7	0.7	0.723	0.691893	0.6252	0.6944	0.513	0.9115	0.5879	0.64	0.7	0.52	0.91	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.467179	NA	NA	NA	NA	NA	0.667	NA	4.3748
1215	6	25726213	25726213	G	A	upstream;downstream	HIST1H2BA;HIST1H2AA	NA	NA	NA	upstream;downstream	ENSG00000146047;ENSG00000164508	NA	NA	NA	NA	NA	6p22.2	NA	Name=HEY1	NA	NA	rs9379785	0.38	0.38	0.331	0.346845	0.2922	0.6815	0.4366	0.0976	0.3313	0.29	0.73	0.4	0.1	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.558933	NA	NA	NA	NA	NA	0.283	NA	4.3744666
1215	7	35209087	35209087	T	C	ncRNA_intronic	DPY19L2P1	NA	NA	NA	ncRNA_exonic	ENSG00000236592	NA	NA	NA	NA	NA	7p14.2	NA	NA	NA	NA	rs112207987	0.23	0.23	0.145	0.215455	0.2922	0.1855	0.2421	0.1589	0.2249	0.29	0.19	0.23	0.21	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.146387	NA	NA	NA	NA	NA	0.036	NA	4.3744666
1215	2	219266204	219266204	T	C	intronic	CTDSP1	NA	NA	NA	intronic	ENSG00000144579	NA	NA	NA	NA	NA	2q35	NA	NA	Name=4	NA	rs2252235	0.57	0.57	0.482	0.55012	0.6262	0.7034	0.611	0.2995	0.6094	0.65	0.71	0.62	0.27	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.061885	NA	NA	NA	NA	NA	0.406	NA	4.3738
1215	3	109635659	109635659	C	T	intergenic	FLJ25363,PVRL3-AS1	dist=421645;dist=1128504	NA	NA	ncRNA_exonic	ENSG00000214380	NA	NA	NA	Score=706;Name=lod=985	NA	3q13.13	NA	NA	NA	NA	rs605795	0.61	0.61	0.58	0.623602	0.6262	0.6944	0.5865	0.5333	0.6963	0.62	0.68	0.64	0.48	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.729198	NA	NA	NA	NA	NA	0.587	NA	4.3738
1215	17	30632274	30632274	G	A	intronic	RHBDL3	NA	NA	NA	intronic	ENSG00000141314	NA	NA	NA	NA	NA	17q11.2	NA	NA	Name=3	NA	rs16967266	0.44	0.44	0.423	0.412939	0.6262	0.1042	0.4942	0.4554	0.3967	0.64	0.1	0.5	0.49	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.017795	NA	NA	NA	NA	NA	0.442	NA	4.3738
1215	12	53045777	53045777	G	A	exonic	KRT2	NA	synonymous SNV	KRT2:NM_000423:exon1:c.C150T:p.G50G	exonic	ENSG00000172867	NA	synonymous SNV	ENSG00000172867:ENST00000309680:exon1:c.C150T:p.G50G	NA	NA	12q13.13	NA	NA	NA	NA	rs11835758	0.27	0.27	0.259	0.278155	0.4423	0.0437	0.451	0.1233	0.4376	0.44	0.03	0.44	0.16	0.3951	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.153835	NA	NA	0.455698	0.168634	NA	0.319	NA	4.3735686
1215	6	25727054	25727054	A	G	upstream	HIST1H2AA,HIST1H2BA	NA	NA	NA	upstream	ENSG00000146047,ENSG00000164508	NA	NA	NA	NA	NA	6p22.2	NA	Name=TBP,HEY1,Pol2-4H8,TAF7_(SQ-8),Pol2(b)	NA	NA	rs4711096	0.39	0.39	0.337	0.351637	0.2932	0.6944	0.4366	0.1051	0.3313	0.29	0.75	0.4	0.11	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.346144	NA	NA	NA	NA	NA	0.29	NA	4.3734666
1215	6	25727057	25727057	C	T	upstream	HIST1H2AA,HIST1H2BA	NA	NA	NA	upstream	ENSG00000146047,ENSG00000164508	NA	NA	NA	NA	NA	6p22.2	NA	Name=HEY1,TBP,Pol2(b),Pol2-4H8,TAF7_(SQ-8)	NA	NA	rs4712959	0.38	0.38	0.328	0.347244	0.2932	0.6825	0.4366	0.0976	0.3313	0.29	0.73	0.4	0.1	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.235861	NA	NA	NA	NA	NA	0.283	NA	4.3734666
1215	6	87606842	87606842	G	A	intergenic	SNHG5,HTR1E	dist=1218391;dist=40182	NA	NA	ncRNA_exonic	ENSG00000217769	NA	NA	NA	NA	Name=IgG glycosylation	6q14.3	NA	NA	NA	NA	rs1853639	0.63	0.63	0.614	0.618411	0.6272	0.5704	0.7061	0.6331	0.5767	0.62	0.56	0.72	0.64	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.725463	NA	NA	NA	NA	NA	0.551	NA	4.3728
1215	9	126794648	126794648	G	A	intronic	LHX2	NA	NA	NA	ncRNA_exonic	ENSG00000234921	NA	NA	NA	NA	NA	9q33.3	NA	NA	Name=10	NA	rs28649641	0.2	0.2	0.242	0.183906	0.3539	0.122	0.1527	0.0688	0.2505	0.36	0.11	0.17	0.07	0.2734	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.070083	NA	NA	0.333644	0.1102	NA	0.232	NA	4.3723893
1215	2	211074909	211074909	T	C	intronic	ACADL	NA	NA	NA	ncRNA_intronic	ENSG00000231294	NA	NA	NA	NA	Name=Metabolite levels	2q34	NA	NA	NA	NA	rs3764913	0.23	0.23	0.219	0.211661	0.3171	0.1865	0.2248	0.0893	0.2853	0.32	0.18	0.28	0.11	0.3018	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.170239	NA	NA	0.342442	0.150023	NA	0.261	NA	4.3719913
1215	1	19583734	19583734	G	A	intronic	MRTO4	NA	NA	NA	intronic	ENSG00000053372	NA	NA	NA	NA	NA	1p36.13	NA	NA	Name=19	NA	rs4912057	0.64	0.64	0.608	0.645367	0.6282	0.8254	0.6988	0.4198	0.7444	0.62	0.84	0.69	0.42	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.847198	NA	NA	NA	NA	NA	0.413	NA	4.3718
1215	4	113377710	113377710	T	G	intergenic	ALPK1,NEUROG2	dist=13946;dist=56962	NA	NA	ncRNA_exonic	ENSG00000248697	NA	NA	NA	Score=682;Name=lod=789	NA	4q25	NA	NA	NA	NA	rs231267	0.63	0.63	0.633	0.628594	0.6282	0.6508	0.4986	0.7126	0.5849	0.62	0.66	0.52	0.7	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.773007	NA	NA	NA	NA	NA	0.594	NA	4.3718
1215	22	42969854	42969854	T	G	ncRNA_exonic	RRP7B	NA	NA	NA	ncRNA_exonic	ENSG00000182841	NA	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs137053	0.55	0.55	0.57	0.58726	0.2952	0.7649	0.3761	0.8707	0.4714	0.29	0.73	0.41	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.3465	NA	NA	NA	NA	NA	0.355	NA	4.3714666
1215	2	206921451	206921451	G	A	exonic	INO80D	NA	synonymous SNV	INO80D:NM_017759:exon4:c.C435T:p.T145T	exonic	ENSG00000114933	NA	synonymous SNV	ENSG00000114933:ENST00000424117:exon3:c.C120T:p.T40T,ENSG00000114933:ENST00000403263:exon4:c.C435T:p.T145T	NA	NA	2q33.3	Score=768;Name=V$STAT3_01	NA	NA	NA	rs818009	0.71	0.71	0.691	0.721845	0.7505	0.745	0.7695	0.5514	0.865	0.76	0.76	0.74	0.57	0.7663	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.132351	NA	NA	0.778997	0.582124	NA	0.79	NA	4.3708696
1215	1	24768778	24768778	G	C	intronic	NIPAL3	NA	NA	NA	intronic	ENSG00000001461	NA	NA	NA	NA	NA	1p36.11	NA	NA	Name=2	NA	rs4648863	0.74	0.74	0.71	0.735024	0.6292	0.7798	0.7536	0.9054	0.5542	0.64	0.75	0.75	0.89	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.254618	NA	NA	NA	NA	NA	0.659	NA	4.3708
1215	1	191115638	191115638	C	T	intergenic	LOC440704,RGS18	dist=344850;dist=1011954	NA	NA	ncRNA_exonic	ENSG00000228020	NA	NA	NA	Score=577;Name=lod=294	NA	1q31.2	NA	NA	NA	NA	rs10753974	0.64	0.64	0.614	0.615815	0.6292	0.6458	0.6354	0.6498	0.5112	0.62	0.66	0.63	0.65	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.128361	NA	NA	NA	NA	NA	0.543	NA	4.3708
1215	2	210046793	210046793	A	G	intergenic	PTH2R,MAP2	dist=687562;dist=241978	NA	NA	downstream	ENSG00000229670,ENSG00000240286	NA	NA	NA	Score=457;Name=lod=96	NA	2q34	NA	NA	NA	NA	rs17676871	0.07	0.07	0.077	0.0625	0.1292	NA	0.0922	0.034	0.0757	0.13	NA	0.11	0.03	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.947381	NA	NA	NA	NA	NA	0.087	NA	4.3708
1215	11	20596324	20596324	G	A	intergenic	PRMT3,SLC6A5	dist=65445;dist=24622	NA	NA	ncRNA_exonic	ENSG00000255291	NA	NA	NA	Score=702;Name=lod=947	NA	11p15.1	NA	NA	NA	NA	rs1975475	0.55	0.55	0.504	0.555112	0.6292	0.6518	0.5965	0.295	0.7014	0.63	0.62	0.59	0.33	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.470413	NA	NA	NA	NA	NA	0.493	NA	4.3708
1215	11	74842197	74842197	C	T	intergenic	OR2AT4,SLCO2B1	dist=41439;dist=19835	NA	NA	ncRNA_exonic	ENSG00000254475	NA	NA	NA	Score=284;Name=lod=19	NA	11q13.4	NA	NA	NA	NA	rs2851097	0.38	0.38	0.367	0.365615	0.6292	0.2679	0.4438	0.0734	0.5348	0.64	0.23	0.45	0.1	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.718594	NA	NA	NA	NA	NA	0.428	NA	4.3708
1215	19	10793749	10793749	A	G	intronic	ILF3	NA	NA	NA	intronic	ENSG00000129351	NA	NA	NA	NA	NA	19p13.2	NA	NA	Name=3	NA	rs2738039	0.72	0.72	0.71	0.76857	0.6292	0.7063	0.7911	0.9244	0.7495	0.62	0.65	0.75	0.91	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.198994	NA	NA	NA	NA	NA	0.674	NA	4.3708
1215	3	151531894	151531894	C	T	ncRNA_UTR5	AADAC	NA	NA	NA	ncRNA_UTR5	ENSG00000114771	NA	NA	NA	NA	NA	3q25.1	NA	NA	NA	NA	rs2293004	0.33	0.33	0.346	0.306909	0.2962	0.3264	0.3646	0.3071	0.2566	0.3	0.33	0.34	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.634851	NA	NA	NA	NA	NA	0.304	NA	4.3704666
1215	6	32523228	32523228	C	T	ncRNA_intronic	HLA-DRB6	NA	NA	NA	ncRNA_intronic	ENSG00000229391	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs72845704	0.24	0.24	0.13	0.235823	0.2962	0.1935	0.3271	0.1793	0.229	0.3	0.2	0.3	0.17	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.455422	NA	NA	NA	NA	NA	0.159	NA	4.3704666
1215	17	80890638	80890638	T	C	intronic	TBCD	NA	NA	NA	intronic	ENSG00000141556	NA	NA	NA	NA	NA	17q25.3	NA	Name=c-Fos,STAT3	Name=74	NA	rs898095	0.55	0.55	0.512	0.541733	0.5835	0.6637	0.5101	0.4206	0.5593	0.56	0.65	0.56	0.43	0.5305	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.628529	NA	NA	0.515573	0.413065	NA	0.58	NA	4.370427
1215	15	76067911	76067911	A	G	intergenic	MIR4313,UBE2Q2	dist=13255;dist=67711	NA	NA	ncRNA_exonic	ENSG00000187812	NA	NA	NA	NA	NA	15q24.2	NA	Name=TAF1,Pol2,TCF4,HEY1,TBP,IRF1,Pol2-4H8	NA	NA	rs12101948	0.32	0.32	0.28	0.315495	0.3082	0.3026	0.3862	0.3336	0.2618	0.32	0.28	0.36	0.32	0.3215	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.057065	NA	NA	NA	NA	ID=COSN164993;OCCURENCE=1(breast)	0.37	NA	4.3703
1215	1	210577873	210577873	G	C	exonic	HHAT	NA	synonymous SNV	HHAT:NM_001170587:exon5:c.G537C:p.L179L,HHAT:NM_001170588:exon5:c.G339C:p.L113L,HHAT:NM_001122834:exon6:c.G534C:p.L178L,HHAT:NM_001170580:exon6:c.G534C:p.L178L,HHAT:NM_018194:exon6:c.G534C:p.L178L	exonic	ENSG00000054392	NA	synonymous SNV	ENSG00000054392:ENST00000426968:exon3:c.G150C:p.L50L,ENSG00000054392:ENST00000545781:exon4:c.G345C:p.L115L,ENSG00000054392:ENST00000308852:exon5:c.G399C:p.L133L,ENSG00000054392:ENST00000537898:exon5:c.G339C:p.L113L,ENSG00000054392:ENST00000545154:exon5:c.G537C:p.L179L,ENSG00000054392:ENST00000261458:exon6:c.G534C:p.L178L,ENSG00000054392:ENST00000367010:exon6:c.G534C:p.L178L,ENSG00000054392:ENST00000391905:exon6:c.G534C:p.L178L,ENSG00000054392:ENST00000413764:exon6:c.G534C:p.L178L	Score=558;Name=lod=246	NA	1q32.2	NA	NA	NA	NA	rs2066721	0.76	0.76	0.759	0.759984	0.7634	0.628	0.8444	0.8517	0.7086	0.78	0.64	0.8	0.86	0.7706	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.945567	NA	NA	0.762442	0.811167	NA	0.754	NA	4.3702246
1215	11	122678911	122678911	C	T	intronic	UBASH3B	NA	NA	NA	intronic	ENSG00000154127	NA	NA	NA	NA	NA	11q24.1	NA	NA	Name=18	NA	rs2276408	0.21	0.21	0.202	0.208466	0.2217	0.1042	0.3184	0.2345	0.1892	0.2	0.13	0.33	0.24	0.2113	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.504328	NA	NA	0.197139	0.245459	NA	0.232	NA	4.369861
1215	4	48486193	48486193	C	G	intronic	SLC10A4	NA	NA	NA	intronic	ENSG00000145248	NA	NA	NA	NA	NA	4p11	NA	Name=GATA-2	NA	NA	rs6845250	0.16	0.16	0.165	0.159944	0.2167	0.1171	0.1124	0.1679	0.1687	0.22	0.1	0.1	0.19	0.1929	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.404747	1.404747	NA	0.220698	0.177712	NA	0.188	NA	4.369702
1215	8	143960597	143960597	G	A	exonic	CYP11B1	NA	synonymous SNV	CYP11B1:NM_000497:exon2:c.C246T:p.D82D,CYP11B1:NM_001026213:exon2:c.C246T:p.D82D	exonic	ENSG00000160882	NA	synonymous SNV	ENSG00000160882:ENST00000292427:exon2:c.C246T:p.D82D,ENSG00000160882:ENST00000517471:exon2:c.C246T:p.D82D,ENSG00000160882:ENST00000377675:exon3:c.C381T:p.D127D	NA	NA	8q24.3	NA	NA	NA	NA	rs5283	0.32	0.32	0.311	0.302716	0.4602	0.3115	0.4582	0.0356	0.3824	0.46	0.32	0.41	0.04	0.3979	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.250844	NA	NA	0.439302	0.111666	NA	0.312	NA	4.3692646
1215	11	11292864	11292864	C	T	intronic	GALNT18	NA	NA	NA	intronic	ENSG00000110328	NA	NA	NA	Score=272;Name=lod=17	NA	11p15.3	NA	NA	NA	NA	rs12282401	0.2	0.2	0.168	0.174521	0.2187	0.2391	0.2291	0.0719	0.1626	0.22	0.23	0.22	0.1	0.2015	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.263637	2.263637	NA	0.210643	0.105407	NA	0.181	NA	4.369157
1215	13	82264343	82264343	A	G	intergenic	SPRY2,NONE	dist=1349257;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000214182	NA	NA	NA	Score=426;Name=lod=72	NA	13q31.1	NA	NA	NA	NA	rs7326041	0.6	0.6	0.597	0.626997	0.6312	0.4583	0.6585	0.6399	0.7566	0.63	0.46	0.69	0.64	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.509602	NA	NA	NA	NA	NA	0.58	NA	4.3688
1215	14	33165182	33165182	C	T	intronic	AKAP6	NA	NA	NA	intronic	ENSG00000151320	NA	NA	NA	Score=816;Name=lod=2769	NA	14q12	Score=952;Name=V$GATA_C	NA	NA	NA	rs3742929	0.68	0.68	0.672	0.721446	0.5	0.8284	0.6931	0.8185	0.728	0.51	0.82	0.67	0.79	0.6117	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.050777	2.050777	NA	0.519884	0.768951	NA	0.616	NA	4.368416
1215	6	158923434	158923434	G	C	exonic	TULP4	NA	synonymous SNV	TULP4:NM_020245:exon13:c.G2739C:p.T913T	exonic	ENSG00000130338	NA	synonymous SNV	ENSG00000130338:ENST00000367097:exon13:c.G2739C:p.T913T	Score=509;Name=lod=156	NA	6q25.3	NA	NA	NA	NA	rs9364968	0.82	0.82	0.798	0.827077	0.7525	0.8869	0.8934	0.7912	0.8436	0.76	0.88	0.9	0.81	0.7872	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.244284	NA	NA	0.758953	0.80867	NA	0.493	NA	4.3680136
1215	2	171912911	171912911	A	T	intronic	TLK1	NA	NA	NA	intronic	ENSG00000198586	NA	NA	NA	NA	NA	2q31.1	NA	NA	Name=36	NA	rs17283147	0.65	0.65	0.64	0.663139	0.6322	0.9524	0.7104	0.2995	0.8548	0.65	0.94	0.65	0.31	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.740433	NA	NA	NA	NA	NA	0.587	NA	4.3678
1215	9	30689856	30689856	C	T	intergenic	LOC401497,ACO1	dist=281404;dist=1694745	NA	NA	ncRNA_exonic	ENSG00000215210	NA	NA	NA	Score=776;Name=lod=1901	NA	9p21.1	NA	NA	NA	NA	rs12378799	0.3	0.3	0.27	0.378794	0.6322	0.2659	0.562	0.0514	0.547	0.44	0.25	0.39	0.06	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.57197	NA	NA	NA	NA	NA	0.333	NA	4.3678
1215	1	26526554	26526554	G	A	intronic	CATSPER4	NA	NA	NA	intronic	ENSG00000188782	NA	NA	NA	Score=313;Name=lod=25	NA	1p36.11	NA	NA	NA	NA	rs6700024	0.18	0.18	0.181	0.191494	0.2247	0.0208	0.1427	0.3548	0.1472	0.24	0.02	0.16	0.31	0.2024	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.025247	NA	NA	0.205349	0.315252	NA	0.196	NA	4.367551
1215	1	47154272	47154272	C	T	ncRNA_intronic	EFCAB14-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000228237	NA	NA	NA	NA	NA	1p33	NA	NA	NA	NA	rs2304745	0.29	0.29	0.255	0.254593	0.2992	0.3353	0.3545	0.1316	0.2209	0.28	0.33	0.37	0.19	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.570742	NA	NA	NA	NA	NA	0.196	NA	4.3674666
1215	1	109737090	109737090	G	A	exonic	KIAA1324	NA	synonymous SNV	KIAA1324:NM_001267049:exon7:c.G945A:p.P315P,KIAA1324:NM_001267048:exon13:c.G1734A:p.P578P,KIAA1324:NM_020775:exon15:c.G1995A:p.P665P	exonic	ENSG00000116299	NA	synonymous SNV	ENSG00000116299:ENST00000529753:exon13:c.G1734A:p.P578P,ENSG00000116299:ENST00000457623:exon14:c.G1845A:p.P615P,ENSG00000116299:ENST00000369939:exon15:c.G1995A:p.P665P	NA	NA	1p13.3	NA	NA	Name=22	NA	rs2359245	0.73	0.73	0.697	0.715256	0.7634	0.9702	0.7954	0.3101	0.8937	0.78	0.97	0.79	0.33	0.7772	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.424724	NA	NA	0.758605	0.371312	NA	0.754	NA	4.3674616
1215	1	109737172	109737172	C	T	exonic	KIAA1324	NA	synonymous SNV	KIAA1324:NM_001267049:exon7:c.C1027T:p.L343L,KIAA1324:NM_001267048:exon13:c.C1816T:p.L606L,KIAA1324:NM_020775:exon15:c.C2077T:p.L693L	exonic	ENSG00000116299	NA	synonymous SNV	ENSG00000116299:ENST00000529753:exon13:c.C1816T:p.L606L,ENSG00000116299:ENST00000457623:exon14:c.C1927T:p.L643L,ENSG00000116299:ENST00000369939:exon15:c.C2077T:p.L693L	Score=551;Name=lod=232	NA	1p13.3	NA	NA	NA	NA	rs2359243	0.73	0.73	0.714	0.714058	0.7634	0.9702	0.7968	0.3048	0.8937	0.78	0.97	0.79	0.33	0.7772	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.053406	NA	NA	0.758953	0.368588	NA	0.761	NA	4.3671136
1215	22	50303533	50303533	C	G	intronic	ALG12	NA	NA	NA	intronic	ENSG00000182858	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs9616368	0.23	0.23	0.23	0.265575	0.2038	0.1081	0.1383	0.4054	0.3926	0.21	0.12	0.15	0.42	0.2238	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.120184	NA	NA	0.205581	0.351112	NA	0.341	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000082165.1;CLNDSDB=.;CLNDSDBID=.	4.366819
1215	22	50303530	50303530	T	C	intronic	ALG12	NA	NA	NA	intronic	ENSG00000182858	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs9616204	0.23	0.23	0.223	0.265575	0.2038	0.1081	0.1383	0.4054	0.3926	0.21	0.12	0.15	0.42	0.2237	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.780771	NA	NA	0.205698	0.350885	NA	0.341	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000082164.1;CLNDSDB=.;CLNDSDBID=.	4.366802
1215	3	42363951	42363951	A	G	intergenic	CCK,LYZL4	dist=56289;dist=74624	NA	NA	ncRNA_exonic	ENSG00000231280	NA	NA	NA	Score=440;Name=lod=82	NA	3p22.1	NA	NA	NA	NA	rs566271	0.51	0.51	0.451	0.469449	0.6332	0.504	0.5994	0.2595	0.4571	0.62	0.47	0.62	0.3	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.303552	NA	NA	NA	NA	NA	0.572	NA	4.3668
1215	10	91738755	91738755	T	C	intergenic	LINC00865,HTR7	dist=138137;dist=761821	NA	NA	ncRNA_exonic	ENSG00000228938	NA	NA	NA	Score=647;Name=lod=566	NA	10q23.31	NA	NA	NA	NA	rs10881718	0.79	0.79	0.781	0.830871	0.6332	0.998	0.7997	0.8169	0.9029	0.65	1	0.77	0.79	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.722469	NA	NA	NA	NA	NA	0.703	NA	4.3668
1215	4	185480256	185480256	T	G	intergenic	IRF2,CASP3	dist=84530;dist=68594	NA	NA	downstream	ENSG00000249056	NA	NA	NA	NA	NA	4q35.1	NA	NA	Name=2	NA	rs6849894	0.25	0.25	0.243	0.28095	0.1332	0.2877	0.121	0.4985	0.2454	0.13	0.28	0.13	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.01972	NA	NA	NA	NA	NA	0.268	NA	4.3668
1215	12	993930	993930	C	T	exonic	WNK1	NA	synonymous SNV	WNK1:NM_014823:exon17:c.C3219T:p.N1073N,WNK1:NM_001184985:exon19:c.C4740T:p.N1580N,WNK1:NM_018979:exon19:c.C3960T:p.N1320N,WNK1:NM_213655:exon19:c.C4716T:p.N1572N	exonic	ENSG00000060237	NA	synonymous SNV	ENSG00000060237:ENST00000340908:exon16:c.C2739T:p.N913N,ENSG00000060237:ENST00000535572:exon17:c.C3219T:p.N1073N,ENSG00000060237:ENST00000315939:exon19:c.C3960T:p.N1320N,ENSG00000060237:ENST00000537687:exon19:c.C4740T:p.N1580N,ENSG00000060237:ENST00000530271:exon21:c.C5454T:p.N1818N	NA	NA	12p13.33	NA	NA	NA	NA	rs7300444	0.44	0.44	0.4	0.398962	0.4404	0.5377	0.428	0.2685	0.3691	0.44	0.53	0.45	0.31	0.4192	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.015518	NA	NA	0.440349	0.296641	NA	0.304	NA	4.3667176
1215	11	1861912	1861912	G	A	intronic	TNNI2	NA	NA	NA	intronic	ENSG00000130598	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs2271441	0.13	0.13	0.156	0.134585	0.2197	0.0575	0.121	0.0908	0.1953	0.2	0.07	0.14	0.1	0.1858	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.401357	NA	NA	0.227866	0.099681	NA	0.123	CLINSIG=untested;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000128664.1;CLNDSDB=.;CLNDSDBID=.	4.366634
1215	6	33096766	33096766	A	G	ncRNA_intronic	HLA-DPB2	NA	NA	NA	ncRNA_intronic	ENSG00000224557	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs3117004	0.28	0.28	0.248	0.274561	0.3002	0.4425	0.2853	0.0756	0.3364	0.29	0.44	0.25	0.09	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.187923	NA	NA	NA	NA	NA	0.188	NA	4.3664666
1215	7	72297549	72297549	G	A	exonic	TYW1B	NA	unknown	UNKNOWN	ncRNA_exonic	ENSG00000254184	NA	NA	NA	NA	NA	7q11.23	NA	NA	NA	NA	rs73131518	0.1	0.1	0.093	0.0942492	0.167	NA	0.111	0.1074	0.0869	0.16	NA	0.13	0.1	0.1317	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.594262	NA	0.1	0.168448	0.115607	NA	0.094	NA	4.3661853
1215	21	45978488	45978488	G	A	exonic	KRTAP10-3	NA	synonymous SNV	KRTAP10-3:NM_198696:exon1:c.C111T:p.C37C	exonic	ENSG00000212935	NA	synonymous SNV	ENSG00000212935:ENST00000391620:exon1:c.C111T:p.C37C	NA	NA	21q22.3	NA	NA	NA	NA	rs12483390	0.24	0.24	0.16	0.252995	0.4642	0.128	0.2363	0.0893	0.3978	0.42	0.1	0.26	0.12	0.3741	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.951989	NA	NA	0.46232	0.125349	NA	0.312	NA	4.3660466
1215	15	101114418	101114418	G	A	exonic	LINS	NA	synonymous SNV	LINS:NM_001040616:exon5:c.C660T:p.F220F	exonic	ENSG00000140471	NA	synonymous SNV	ENSG00000140471:ENST00000314742:exon5:c.C660T:p.F220F,ENSG00000140471:ENST00000560133:exon5:c.C303T:p.F101F,ENSG00000140471:ENST00000561308:exon5:c.C660T:p.F220F	NA	NA	15q26.3	NA	NA	NA	NA	rs8039437	0.33	0.33	0.326	0.314297	0.4513	0.246	0.2493	0.2481	0.3793	0.46	0.25	0.29	0.27	0.3867	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.210424	NA	NA	0.462737	0.274112	NA	0.377	NA	4.3659296
1215	15	90273040	90273040	C	G	intronic	WDR93	NA	NA	NA	intronic	ENSG00000140527	NA	NA	NA	NA	NA	15q26.1	NA	NA	Name=2	NA	rs16943559	0.18	0.18	0.188	0.189097	0.2147	0.001	0.1542	0.3238	0.1994	0.21	0.0017	0.18	0.34	0.2011	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.792326	NA	NA	0.218307	0.318409	NA	0.254	NA	4.365893
1215	6	29913171	29913171	G	A	intronic	HLA-A	NA	NA	NA	intronic	ENSG00000206503	NA	NA	NA	NA	NA	6p22.1	NA	Name=Pol2-4H8,Pol2	NA	NA	rs2975057	0.68	0.68	0.673	0.686502	0.6342	0.6885	0.7752	0.73	0.6166	0.61	0.72	0.74	0.71	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.654008	NA	NA	NA	NA	NA	0.558	NA	4.3658
1215	14	107170005	107170005	T	C	intergenic	LINC00221,NONE	dist=218476;dist=NONE	NA	NA	exonic	ENSG00000211973	NA	nonsynonymous SNV	ENSG00000211973:ENST00000390633:exon2:c.A277G:p.K93E	NA	NA	14q32.33	NA	NA	Name=5	NA	rs1141720	NA	NA	0.521	0.496805	0.501	0.4891	0.5274	0.6188	0.3139	NA	NA	NA	NA	0.4755	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.830639	NA	1	0.491312	0.613571	NA	0.58	NA	4.3655214
1216	11	117209268	117209268	C	T	intronic	CEP164	NA	NA	NA	intronic	ENSG00000110274	NA	NA	NA	NA	NA	11q23.3	NA	NA	Name=6	NA	rs573801	0.2	0.2	0.199	0.217652	0.1909	0.1171	0.268	0.2625	0.2526	0.18	0.11	0.26	0.29	0.2231	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.387143	1.387143	NA	0.221252	0.278055	NA	0.188	NA	4.364748
1216	3	10081545	10081545	G	C	intronic	FANCD2	NA	NA	NA	exonic	ENSG00000144554	NA	synonymous SNV	ENSG00000144554:ENST00000431693:exon8:c.G711C:p.L237L	NA	NA	3p25.3	NA	NA	NA	NA	rs17032283	0.18	0.18	0.19	0.182109	0.1392	0.0486	0.1614	0.3623	0.135	0.15	0.07	0.18	0.38	0.1659	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.475388	NA	NA	0.163605	0.321153	NA	0.348	NA	4.3646283
1216	2	158636910	158636910	G	A	exonic	ACVR1	NA	synonymous SNV	ACVR1:NM_001105:exon4:c.C270T:p.A90A,ACVR1:NM_001111067:exon4:c.C270T:p.A90A	exonic	ENSG00000115170	NA	synonymous SNV	ENSG00000115170:ENST00000409283:exon3:c.C270T:p.A90A,ENSG00000115170:ENST00000263640:exon4:c.C270T:p.A90A,ENSG00000115170:ENST00000434821:exon4:c.C270T:p.A90A,ENSG00000115170:ENST00000410057:exon5:c.C270T:p.A90A	NA	NA	2q24.1	Score=896;Name=V$NF1_Q6	NA	NA	NA	rs2227861	0.68	0.68	0.641	0.650958	0.7793	0.9067	0.7666	0.1838	0.8047	0.77	0.9	0.76	0.21	0.7502	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.184992	NA	NA	0.772674	0.276895	NA	0.594	NA	4.3644926
1216	8	56364648	56364648	G	A	ncRNA_exonic	SBF1P1	NA	NA	NA	ncRNA_exonic	ENSG00000248522	NA	NA	NA	NA	NA	8q12.1	NA	NA	NA	NA	rs2975984	0.19	0.19	0.178	0.186102	0.3022	0.123	0.1787	0.1324	0.2096	0.29	0.1	0.2	0.14	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.352017	NA	NA	NA	NA	NA	0.167	NA	4.3644666
1216	6	148761603	148761603	C	A	intronic	SASH1	NA	NA	NA	UTR3	ENSG00000111961	ENST00000367469:c.*56C>A	NA	NA	NA	NA	6q24.3	NA	NA	Name=3	NA	rs9498038	0.41	0.41	0.382	0.467851	0.4076	0.3978	0.428	0.4092	0.7096	0.41	0.39	0.41	0.41	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.920353	NA	NA	0.39472	0.421243	NA	0.399	NA	4.3643467
1216	3	27353716	27353716	C	A	intronic	NEK10	NA	NA	NA	intronic	ENSG00000163491	NA	NA	NA	NA	NA	3p24.1	NA	Name=CTCF_(C-20),Rad21,CTCF,RFX5_(N-494),CTCF_(SC-5916),SMC3_(ab9263)	Name=141	NA	rs552647	0.56	0.56	0.597	0.597843	0.5328	0.2659	0.6124	0.9705	0.4928	0.53	0.23	0.64	0.96	0.5611	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.644388	NA	NA	0.542016	0.896684	NA	0.616	NA	4.364084
1216	3	58196639	58196639	C	T	UTR5	DNASE1L3	NM_004944:c.-6G>A,NM_001256560:c.-6G>A	NA	NA	UTR5	ENSG00000163687	ENST00000486455:c.-6G>A,ENST00000318316:c.-6G>A,ENST00000483681:c.-6G>A,ENST00000394549:c.-6G>A,ENST00000461914:c.-6G>A,ENST00000460422:c.-6G>A	NA	NA	NA	NA	3p14.3	NA	NA	Name=15	NA	rs2292677	0.3	0.3	0.311	0.272764	0.3161	0.3532	0.3516	0.1536	0.2505	0.33	0.36	0.33	0.16	0.3192	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.222669	NA	NA	0.334186	0.183613	NA	0.391	NA	4.3638474
1216	20	44120066	44120066	T	C	intergenic	WFDC2,SPINT3	dist=9894;dist=21035	NA	NA	ncRNA_exonic	ENSG00000237068	NA	NA	NA	Score=784;Name=lod=2044	NA	20q13.12	NA	NA	NA	NA	rs6065824	0.55	0.55	0.545	0.543131	0.6362	0.4643	0.6138	0.5068	0.5276	0.65	0.49	0.56	0.48	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.183101	NA	NA	NA	NA	NA	0.659	NA	4.3638
1216	8	22481449	22481449	A	G	exonic	BIN3	NA	synonymous SNV	BIN3:NM_018688:exon8:c.T594C:p.F198F	exonic	ENSG00000147439	NA	synonymous SNV	ENSG00000147439:ENST00000399977:exon6:c.T450C:p.F150F,ENSG00000147439:ENST00000519513:exon6:c.T432C:p.F144F,ENSG00000147439:ENST00000276416:exon8:c.T594C:p.F198F	NA	NA	8p21.3	NA	NA	NA	NA	rs1871900	0.46	0.46	0.454	0.497204	0.4394	0.3978	0.3977	0.6067	0.5818	0.43	0.42	0.41	0.57	0.4476	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.456207	NA	NA	0.416084	0.54154	NA	0.442	NA	4.3635826
1216	6	132785224	132785224	A	C	intronic	STX7	NA	NA	NA	intronic	ENSG00000079950	NA	NA	NA	Score=251;Name=lod=14	NA	6q23.2	NA	NA	NA	NA	rs3757299	0.21	0.21	0.206	0.207468	0.2048	0.1538	0.1916	0.2209	0.2587	0.2	0.19	0.17	0.26	0.2144	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.653581	NA	NA	0.217558	0.219473	NA	0.116	NA	4.363242
1216	11	6865758	6865758	T	C	intergenic	OR6A2,OR10A5	dist=48619;dist=1156	NA	NA	ncRNA_exonic	ENSG00000254712	NA	NA	NA	Score=329;Name=lod=29	NA	11p15.4	NA	NA	NA	NA	rs2595437	0.61	0.61	0.598	0.597444	0.6372	0.6389	0.5	0.6127	0.5624	0.64	0.64	0.54	0.6	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.367573	NA	NA	NA	NA	NA	0.638	NA	4.3628
1216	13	53774627	53774627	A	G	intergenic	OLFM4,LINC00558	dist=148431;dist=614927	NA	NA	ncRNA_exonic	ENSG00000225510	NA	NA	NA	NA	NA	13q14.3	Score=736;Name=V$HOX13_01	NA	NA	NA	rs2004422	0.77	0.77	0.734	0.801917	0.6382	0.8393	0.7651	0.9478	0.7607	0.63	0.84	0.72	0.92	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.623629	NA	NA	NA	NA	NA	0.797	NA	4.3618
1216	15	101109893	101109893	C	A	exonic	LINS	NA	synonymous SNV	LINS:NM_001040616:exon7:c.G1824T:p.G608G	exonic	ENSG00000140471	NA	synonymous SNV	ENSG00000140471:ENST00000314742:exon7:c.G1824T:p.G608G	NA	NA	15q26.3	NA	NA	NA	NA	rs6598356	0.33	0.33	0.339	0.311701	0.4513	0.247	0.2493	0.2375	0.3793	0.46	0.25	0.29	0.25	0.3848	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.178847	NA	NA	0.469302	0.282796	NA	0.377	NA	4.3612646
1216	6	29976842	29976842	T	G	ncRNA_exonic	HLA-J	NA	NA	NA	ncRNA_exonic	ENSG00000204622,ENSG00000204623	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs9261113	0.2	0.2	0.158	0.205072	0.1292	0.1915	0.1888	0.3011	0.1789	0.13	0.2	0.22	0.3	0.1764	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.414903	NA	NA	NA	NA	NA	0.188	NA	4.3610666
1216	8	24366020	24366020	T	C	intronic	ADAM7	NA	NA	NA	ncRNA_intronic	ENSG00000253535,ENSG00000253643	NA	NA	NA	NA	NA	8p21.2	NA	Name=YY1_(C-20)	NA	NA	rs2290150	0.28	0.28	0.258	0.292133	0.3052	0.1905	0.438	0.1974	0.408	0.31	0.2	0.42	0.21	0.3335	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.363666	NA	NA	0.333837	0.21675	NA	0.21	NA	4.3607963
1216	19	55048270	55048270	C	T	ncRNA_exonic	KIR3DX1	NA	NA	NA	exonic	ENSG00000104970	NA	synonymous SNV	ENSG00000104970:ENST00000221567:exon5:c.C837T:p.N279N,ENSG00000104970:ENST00000335056:exon5:c.C837T:p.N279N	NA	NA	19q13.42	NA	NA	NA	NA	rs17606836	0.22	0.22	0.192	0.217053	0.2793	0.1905	0.2061	0.146	0.2843	0.28	0.2	0.23	0.11	0.2559	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.560072	NA	NA	0.270984	0.132051	NA	0.246	NA	4.3604826
1216	1	103354428	103354428	A	G	exonic	COL11A1	NA	synonymous SNV	COL11A1:NM_080630:exon58:c.T4164C:p.G1388G,COL11A1:NM_001190709:exon59:c.T4395C:p.G1465G,COL11A1:NM_001854:exon60:c.T4512C:p.G1504G,COL11A1:NM_080629:exon60:c.T4548C:p.G1516G	exonic	ENSG00000060718	NA	synonymous SNV	ENSG00000060718:ENST00000512756:exon58:c.T4164C:p.G1388G,ENSG00000060718:ENST00000353414:exon59:c.T4395C:p.G1465G,ENSG00000060718:ENST00000358392:exon60:c.T4548C:p.G1516G,ENSG00000060718:ENST00000370096:exon60:c.T4512C:p.G1504G	Score=545;Name=lod=218	NA	1p21.1	NA	NA	NA	NA	rs1763347	0.68	0.68	0.641	0.622604	0.8042	0.746	0.8401	0.2587	0.6462	0.81	0.77	0.82	0.29	0.7239	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.764344	NA	NA	0.778256	0.319791	ID=COSM423331,COSM423330;OCCURENCE=1(breast)	0.543	NA	4.3603106
1216	20	3299054	3299054	T	C	intronic	C20orf194	NA	NA	NA	intronic	ENSG00000088854	NA	NA	NA	NA	NA	20p13	NA	NA	Name=29	NA	rs6139071	0.24	0.24	0.256	0.23722	0.2187	0.1657	0.1859	0.3759	0.1789	0.22	0.19	0.15	0.39	0.2105	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.256513	NA	NA	0.210635	0.358535	NA	0.283	NA	4.360165
1216	11	134147371	134147371	G	A	intronic	GLB1L3	NA	NA	NA	intronic	ENSG00000166105	NA	NA	NA	NA	NA	11q25	NA	NA	Name=4	NA	rs67473835	0.24	0.24	0.177	0.258387	0.1899	0.3919	0.2695	0.1346	0.3507	0.19	0.35	0.28	0.14	0.2501	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.314871	1.314871	NA	0.199874	0.17341	NA	0.217	NA	4.360126
1216	10	30978377	30978377	G	C	intergenic	LYZL2,ZNF438	dist=59730;dist=155188	NA	NA	ncRNA_exonic	ENSG00000234814	NA	NA	NA	Score=595;Name=lod=349	NA	10p11.23	NA	NA	NA	NA	rs10763815	NA	NA	0.411	0.55012	0.6402	0.4583	0.5807	0.4327	0.6892	NA	NA	NA	NA	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.251137	1.251137	NA	NA	NA	NA	0.399	NA	4.3598
1216	11	20596656	20596656	T	A	intergenic	PRMT3,SLC6A5	dist=65777;dist=24290	NA	NA	downstream	ENSG00000255291	NA	NA	NA	Score=695;Name=lod=889	NA	11p15.1	NA	NA	NA	NA	rs73441914	0.1	0.1	0.096	0.0966454	0.1402	0.001	0.0965	0.1483	0.0808	0.13	NA	0.11	0.15	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.806799	NA	NA	NA	NA	NA	0.065	NA	4.3598
1216	6	7572262	7572262	A	G	exonic	DSP	NA	synonymous SNV	DSP:NM_001008844:exon15:c.A2091G:p.G697G,DSP:NM_004415:exon15:c.A2091G:p.G697G	exonic	ENSG00000096696	NA	synonymous SNV	ENSG00000096696:ENST00000379802:exon15:c.A2091G:p.G697G,ENSG00000096696:ENST00000418664:exon15:c.A2091G:p.G697G	NA	NA	6p24.3	NA	NA	NA	NA	rs2076304	0.79	0.79	0.813	0.774361	0.7664	0.8026	0.7925	0.823	0.6748	0.75	0.84	0.77	0.81	0.7614	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.556164	NA	NA	0.779535	0.79823	NA	0.761	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000038004.1;CLNDSDB=.;CLNDSDBID=.	4.3593316
1216	1	76344711	76344711	A	T	exonic	MSH4	NA	synonymous SNV	MSH4:NM_002440:exon12:c.A1575T:p.L525L	exonic	ENSG00000057468	NA	synonymous SNV	ENSG00000057468:ENST00000263187:exon12:c.A1575T:p.L525L	Score=604;Name=lod=379	NA	1p31.1	NA	NA	NA	NA	rs5745449	0.8	0.8	0.802	0.792732	0.7515	0.9851	0.7781	0.6846	0.7935	0.77	0.99	0.76	0.66	0.7963	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.976786	NA	NA	0.759828	0.705856	NA	0.768	NA	4.3590386
1216	17	41251931	41251931	G	A	intronic	BRCA1	NA	NA	NA	intronic	ENSG00000012048	NA	NA	NA	NA	NA	17q21.31	NA	NA	NA	NA	rs799923	0.1	0.1	0.085	0.0986422	0.2266	NA	0.1167	0.0098	0.1759	0.22	NA	0.12	0.01	0.1738	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.063107	NA	NA	0.240698	0.048797	NA	0.159	CLINSIG=untested;CLNDBN=Breast-ovarian_cancer\x2c_familial_1;CLNREVSTAT=not;CLNACC=RCV000112677.1;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet;CLNDSDBID=NBK1247:C2676676:604370:ORPHA145	4.358902
1216	1	228431930	228431930	C	T	intronic	OBSCN	NA	NA	NA	intronic	ENSG00000154358	NA	NA	NA	NA	NA	1q42.13	NA	Name=KAP1	NA	NA	rs10916293	0.63	0.63	0.608	0.616813	0.6412	0.5982	0.6527	0.711	0.4581	0.63	0.59	0.64	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.063398	NA	NA	NA	NA	ID=COSN163462;OCCURENCE=1(breast)	0.609	NA	4.3588
1216	3	75388161	75388161	T	C	intergenic	MIR4444-1,FAM86DP	dist=124462;dist=82542	NA	NA	ncRNA_exonic	ENSG00000228868	NA	NA	NA	Score=517;Name=lod=168	NA	3p12.3	NA	NA	NA	NA	rs6765044	0.47	0.47	0.419	0.428115	0.6412	0.4643	0.4827	0.1203	0.5491	0.64	0.5	0.52	0.13	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.09558	2.09558	NA	NA	NA	NA	0.493	NA	4.3588
1216	7	11860937	11860937	G	A	intronic	THSD7A	NA	NA	NA	intronic	ENSG00000005108	NA	NA	NA	Score=549;Name=lod=228	NA	7p21.3	NA	NA	NA	NA	rs7807756	0.62	0.62	0.611	0.624201	0.6412	0.628	0.7435	0.5045	0.68	0.63	0.65	0.72	0.51	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.179314	NA	NA	NA	NA	NA	0.674	NA	4.3588
1216	19	17885270	17885270	A	G	exonic	FCHO1	NA	synonymous SNV	FCHO1:NM_001161359:exon11:c.A753G:p.P251P,FCHO1:NM_001161358:exon12:c.A903G:p.P301P,FCHO1:NM_001161357:exon13:c.A903G:p.P301P,FCHO1:NM_015122:exon13:c.A903G:p.P301P	exonic	ENSG00000130475	NA	synonymous SNV	ENSG00000130475:ENST00000597512:exon9:c.A924G:p.P308P,ENSG00000130475:ENST00000252771:exon11:c.A903G:p.P301P,ENSG00000130475:ENST00000389133:exon11:c.A903G:p.P301P,ENSG00000130475:ENST00000595033:exon11:c.A753G:p.P251P,ENSG00000130475:ENST00000596951:exon11:c.A903G:p.P301P,ENSG00000130475:ENST00000539407:exon12:c.A903G:p.P301P,ENSG00000130475:ENST00000600676:exon12:c.A903G:p.P301P,ENSG00000130475:ENST00000594202:exon13:c.A903G:p.P301P,ENSG00000130475:ENST00000596536:exon13:c.A903G:p.P301P	NA	NA	19p13.11	NA	NA	NA	NA	rs2287859	0.6	0.6	0.539	0.594649	0.4056	0.8254	0.5937	0.5772	0.5757	0.41	0.85	0.57	0.61	0.4931	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.062938	NA	NA	0.409746	0.557195	NA	0.565	NA	4.3582206
1216	2	55404925	55404925	C	T	intronic	CLHC1	NA	NA	NA	intronic	ENSG00000162994	NA	NA	NA	Score=397;Name=lod=55	NA	2p16.1	NA	NA	NA	NA	rs6545477	0.2	0.2	0.203	0.199481	0.2147	0.0367	0.1715	0.3669	0.1452	0.21	0.03	0.17	0.4	0.2077	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.118551	NA	NA	0.219419	0.356786	NA	0.246	NA	4.358181
1216	20	60791404	60791404	C	T	exonic	HRH3	NA	synonymous SNV	HRH3:NM_007232:exon3:c.G996A:p.S332S	exonic	ENSG00000101180	NA	synonymous SNV	ENSG00000101180:ENST00000317393:exon3:c.G996A:p.S332S,ENSG00000101180:ENST00000340177:exon3:c.G996A:p.S332S	NA	NA	20q13.33	NA	NA	NA	NA	rs3787429	0.47	0.47	0.483	0.490415	0.4056	0.3671	0.4986	0.5825	0.5746	0.42	0.39	0.49	0.61	0.5084	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.014705	NA	0	0.394571	0.546882	NA	0.486	NA	4.3580956
1216	8	95186382	95186382	G	A	exonic	CDH17	NA	synonymous SNV	CDH17:NM_001144663:exon6:c.C531T:p.V177V,CDH17:NM_004063:exon6:c.C531T:p.V177V	exonic	ENSG00000079112	NA	synonymous SNV	ENSG00000079112:ENST00000027335:exon6:c.C531T:p.V177V,ENSG00000079112:ENST00000450165:exon6:c.C531T:p.V177V	NA	NA	8q22.1	NA	NA	NA	NA	rs3214050	0.34	0.34	0.336	0.345847	0.4384	0.3165	0.281	0.2307	0.4826	0.43	0.33	0.3	0.22	0.4017	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.182416	NA	NA	0.468488	0.237177	ID=COSM150505;OCCURENCE=1(stomach)	0.333	NA	4.3580786
1216	14	51370784	51370784	G	C	intronic	ABHD12B	NA	NA	NA	intronic	ENSG00000100504,ENSG00000131969	NA	NA	NA	NA	NA	14q22.1	NA	Name=GATA-2	NA	NA	rs4901064	0.3	0.3	0.272	0.283746	0.2028	0.4573	0.3876	0.1649	0.2751	0.21	0.47	0.38	0.18	0.2481	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.387775	NA	NA	0.191163	0.153427	NA	0.188	NA	4.357937
1216	3	58398813	58398813	A	G	intronic	PXK	NA	NA	NA	UTR3	ENSG00000168297	ENST00000459676:c.*118A>G	NA	NA	NA	NA	3p14.3	NA	NA	Name=3	NA	rs13071422	0.75	0.75	0.762	0.740615	0.8091	0.7996	0.7277	0.6089	0.7965	0.79	0.81	0.77	0.63	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.976959	NA	NA	NA	NA	NA	0.775	NA	4.3575667
1216	4	41984118	41984118	C	T	exonic	DCAF4L1	NA	synonymous SNV	DCAF4L1:NM_001029955:exon1:c.C309T:p.S103S	exonic	ENSG00000182308	NA	synonymous SNV	ENSG00000182308:ENST00000333141:exon1:c.C309T:p.S103S	Score=589;Name=lod=329	NA	4p13	NA	NA	NA	NA	rs2660320	0.69	0.69	0.641	0.658946	0.7763	0.9593	0.7983	0.1452	0.8241	0.79	0.96	0.78	0.15	0.7564	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.262587	1.262587	NA	0.776628	0.24512	NA	0.558	NA	4.3573386
1216	3	75472260	75472260	C	T	ncRNA_intronic	FAM86DP	NA	NA	NA	ncRNA_exonic	ENSG00000244026	NA	NA	NA	NA	NA	3p12.3	NA	NA	NA	NA	rs62259122	0.14	0.14	0.126	0.131989	0.164	0.0188	0.1599	0.2337	0.0583	0.16	0.02	0.14	0.25	0.1454	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.380293	NA	NA	NA	NA	NA	0.246	NA	4.3572666
1216	6	29874647	29874647	G	C	intergenic	HLA-H,HCG4B	dist=15791;dist=17722	NA	NA	ncRNA_exonic	ENSG00000233677	NA	NA	NA	Score=612;Name=lod=409	NA	6p22.1	NA	NA	NA	NA	rs9259608	0.62	0.62	0.639	0.632588	0.6431	0.5556	0.6816	0.6793	0.6033	0.63	0.53	0.61	0.73	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.801868	NA	NA	NA	NA	NA	0.623	NA	4.3569
1216	3	75472209	75472209	C	T	ncRNA_exonic	FAM86DP	NA	NA	NA	ncRNA_exonic	ENSG00000244026	NA	NA	NA	NA	NA	3p12.3	NA	NA	NA	NA	rs11537690	0.14	0.14	0.119	0.131989	0.164	0.0188	0.1599	0.2337	0.0583	0.16	0.02	0.14	0.26	0.1458	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.003269	NA	0.37	NA	NA	NA	0.246	NA	4.3568666
1216	5	148580025	148580025	G	A	intronic	ABLIM3	NA	NA	NA	ncRNA_intronic	ENSG00000248647	NA	NA	NA	NA	NA	5q32	NA	Name=ZNF263	Name=29	NA	rs6580602	0.66	0.66	0.659	0.646965	0.671	0.4712	0.7061	0.7579	0.6115	0.69	0.51	0.7	0.76	0.6544	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.392269	NA	NA	0.651163	0.742851	NA	0.667	NA	4.3567703
1216	9	33625360	33625360	T	C	ncRNA_exonic	ANXA2P2	NA	NA	NA	ncRNA_exonic	ENSG00000231991	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs10971607	0.26	0.26	0.24	0.252596	0.3101	0.2937	0.2867	0.2065	0.1892	0.29	0.25	0.29	0.18	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.189651	NA	NA	NA	NA	ID=COSN168513;OCCURENCE=1(large_intestine)	0.319	NA	4.3565666
1216	6	29910429	29910429	C	G	intronic	HLA-A	NA	NA	NA	ncRNA_exonic	ENSG00000227766	NA	NA	NA	NA	NA	6p22.1	NA	Name=GTF2F1_(RAP-74),Oct-2,HEY1,Pol2-4H8,TAF7_(SQ-8),YY1_(C-20),Sin3Ak-20,Pol2(phosphoS2),YY1,Pol2,POU2F2,TAF1	NA	NA	rs9260123	0.51	0.51	0.426	NA	NA	NA	NA	NA	NA	0.48	0.57	0.53	0.47	0.5067	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.486271	1.486271	NA	0.470436	0.465977	NA	0.384	NA	4.3561973
1216	4	42022464	42022464	C	A	exonic	SLC30A9	NA	synonymous SNV	SLC30A9:NM_006345:exon4:c.C366A:p.G122G	exonic	ENSG00000014824	NA	synonymous SNV	ENSG00000014824:ENST00000264451:exon4:c.C366A:p.G122G	Score=638;Name=lod=521	NA	4p13	NA	NA	NA	NA	rs15857	0.71	0.71	0.665	0.667133	0.7763	0.9583	0.804	0.1884	0.8047	0.79	0.96	0.79	0.22	0.7582	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.186015	NA	NA	0.775994	0.278711	NA	0.558	NA	4.3561726
1216	1	118183659	118183659	A	C	intergenic	FAM46C,GDAP2	dist=12648;dist=222448	NA	NA	ncRNA_exonic	ENSG00000213262	NA	NA	NA	Score=699;Name=lod=927	NA	1p12	NA	NA	NA	NA	rs1775826	0.51	0.51	0.497	0.489417	0.6441	0.4286	0.6023	0.3207	0.5409	0.63	0.45	0.62	0.32	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.243285	NA	NA	NA	NA	NA	0.464	NA	4.3559
1216	16	74702662	74702662	A	G	intergenic	RFWD3,MLKL	dist=1883;dist=3091	NA	NA	downstream	ENSG00000262904	NA	NA	NA	Score=343;Name=lod=33	NA	16q23.1	NA	NA	NA	NA	rs4888273	0.11	0.11	0.08	0.118411	0.1441	0.005	0.2925	0.0953	0.1166	0.15	0.0017	0.25	0.07	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.936721	NA	NA	NA	NA	NA	0.13	NA	4.3559
1216	16	70070508	70070508	G	A	ncRNA_intronic	PDXDC2P	NA	NA	NA	ncRNA_intronic	ENSG00000196696,ENSG00000255185	NA	NA	NA	NA	NA	16q22.1	NA	NA	NA	NA	rs3762174	0.31	0.31	0.209	0.339657	0.3111	0.4911	0.3746	0.1248	0.4785	0.28	0.46	0.38	0.12	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.399624	1.399624	NA	NA	NA	NA	0.051	NA	4.3555666
1216	19	53741068	53741068	C	T	exonic	ZNF677	NA	synonymous SNV	ZNF677:NM_182609:exon5:c.G912A:p.S304S	exonic	ENSG00000197928	NA	synonymous SNV	ENSG00000197928:ENST00000333952:exon5:c.G912A:p.S304S,ENSG00000197928:ENST00000598513:exon5:c.G912A:p.S304S	NA	NA	19q13.42	NA	NA	NA	NA	rs12984188	0.47	0.47	0.458	0.464856	0.4324	0.752	0.4294	0.2148	0.5654	0.43	0.75	0.44	0.25	0.4592	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.302254	NA	NA	0.419651	0.243305	ID=COSM148729;OCCURENCE=1(stomach)	0.399	NA	4.3554156
1217	1	203923760	203923760	C	T	intergenic	SNRPE,LINC00303	dist=83480;dist=77815	NA	NA	upstream	ENSG00000237379	NA	NA	NA	Score=304;Name=lod=23	NA	1q32.1	NA	NA	NA	NA	rs28595337	0.21	0.21	0.207	0.224441	0.1451	0.3621	0.353	0.1142	0.2219	0.13	0.36	0.25	0.12	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.310694	NA	NA	NA	NA	ID=COSN163403;OCCURENCE=1(breast)	NA	NA	4.3549
1217	6	52630153	52630153	C	T	intergenic	GSTA2,GSTA1	dist=1792;dist=26025	NA	NA	ncRNA_exonic	ENSG00000217228	NA	NA	NA	Score=405;Name=lod=59	NA	6p12.2	NA	NA	NA	NA	rs6458868	0.74	0.74	0.72	0.735423	0.6451	0.8631	0.755	0.7496	0.6636	0.64	0.86	0.74	0.75	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.315688	NA	NA	NA	NA	NA	0.609	NA	4.3549
1217	6	52631188	52631188	A	G	intergenic	GSTA2,GSTA1	dist=2827;dist=24990	NA	NA	ncRNA_exonic	ENSG00000217228	NA	NA	NA	Score=401;Name=lod=57	NA	6p12.2	NA	NA	NA	NA	rs2749029	0.78	0.78	0.789	0.788139	0.6451	0.8631	0.7723	0.9402	0.6636	0.64	0.86	0.76	0.94	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.465423	NA	NA	NA	NA	NA	0.804	NA	4.3549
1217	3	196386964	196386964	C	G	exonic	LRRC33	NA	synonymous SNV	LRRC33:NM_198565:exon3:c.C450G:p.A150A	exonic	ENSG00000174004	NA	synonymous SNV	ENSG00000174004:ENST00000328557:exon3:c.C450G:p.A150A	NA	NA	3q29	Score=768;Name=V$PAX5_02	NA	NA	NA	rs1798631	0.79	0.79	0.788	0.808107	0.7644	0.9325	0.8646	0.6823	0.8548	0.74	0.93	0.83	0.67	0.7869	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.486398	NA	NA	0.761744	0.697231	ID=COSM446261;OCCURENCE=1(breast)	0.79	NA	4.3536226
1217	1	43055243	43055243	C	G	intronic	CCDC30	NA	NA	NA	intronic	ENSG00000186409	NA	NA	NA	NA	NA	1p34.2	NA	NA	Name=2	NA	rs10789417	0.65	0.65	0.617	0.665136	0.6471	0.5933	0.5922	0.7375	0.7117	0.64	0.54	0.65	0.78	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.256143	NA	NA	NA	NA	NA	0.587	NA	4.3529
1217	6	63257971	63257971	T	C	intergenic	KHDRBS2,LGSN	dist=261871;dist=727885	NA	NA	ncRNA_exonic	ENSG00000217067	NA	NA	NA	Score=670;Name=lod=706	NA	6q11.1	NA	NA	NA	NA	rs6913632	0.67	0.67	0.664	0.66234	0.6471	0.5893	0.4957	0.9009	0.5491	0.66	0.57	0.54	0.89	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.127929	NA	NA	NA	NA	NA	0.725	NA	4.3529
1217	16	57074451	57074451	T	C	intronic	NLRC5	NA	NA	NA	intronic	ENSG00000140853	NA	NA	NA	NA	NA	16q13	NA	NA	Name=7	NA	rs289726	0.52	0.52	0.499	0.465455	0.6471	0.3978	0.5519	0.3404	0.456	0.65	0.42	0.59	0.36	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.549216	NA	NA	NA	NA	NA	0.37	NA	4.3529
1217	4	155466935	155466935	T	C	intronic	PLRG1	NA	NA	NA	intronic	ENSG00000171566	NA	NA	NA	NA	NA	4q31.3	NA	Name=CTCF	NA	NA	rs11935584	0.24	0.24	0.27	0.28115	0.326	0.1438	0.1988	0.3396	0.3558	0.3	0.13	0.22	0.31	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.961535	2.961535	NA	0.321182	0.322254	NA	0.268	NA	4.352818
1217	2	172216969	172216969	T	C	exonic	METTL8	NA	unknown	UNKNOWN	exonic	ENSG00000123600	NA	synonymous SNV	ENSG00000123600:ENST00000375258:exon3:c.A198G:p.K66K,ENSG00000123600:ENST00000392599:exon3:c.A198G:p.K66K,ENSG00000123600:ENST00000442778:exon3:c.A198G:p.K66K,ENSG00000123600:ENST00000447486:exon3:c.A48G:p.K16K,ENSG00000123600:ENST00000392604:exon4:c.A198G:p.K66K,ENSG00000123600:ENST00000442541:exon4:c.A198G:p.K66K,ENSG00000123600:ENST00000453846:exon4:c.A198G:p.K66K	NA	NA	2q31.1	NA	NA	NA	NA	rs3731986	0.3	0.3	0.294	0.311502	0.327	0.1498	0.2565	0.4788	0.2751	0.32	0.12	0.3	0.49	0.3084	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.428364	NA	NA	0.345233	0.460962	NA	0.333	NA	4.3527003
1217	17	46673724	46673724	C	T	ncRNA_UTR3	HOXB6	NA	NA	NA	ncRNA_UTR3	ENSG00000108511	NA	NA	NA	NA	NA	17q21.32	NA	Name=SUZ12	NA	NA	rs12940530	0.4	0.4	0.132	0.426917	0.5825	0.5208	0.5432	0.1127	0.5123	0.5	0.49	0.47	0.11	0.5233	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.069784	NA	NA	0.208488	0.028597	NA	NA	NA	4.3523786
1217	12	18845754	18845754	C	T	intronic	PLCZ1	NA	NA	NA	ncRNA_exonic	ENSG00000255993	NA	NA	NA	Score=847;Name=lod=3675	NA	12p12.3	NA	NA	NA	NA	rs1973289	0.96	0.96	0.952	0.953674	0.9811	0.999	0.9798	0.8759	0.9652	0.99	1	0.98	0.86	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.40642	NA	NA	NA	NA	NA	0.957	NA	4.3522333
1217	9	71224796	71224796	G	C	intergenic	TMEM252,PIP5K1B	dist=69013;dist=95820	NA	NA	ncRNA_exonic	ENSG00000224025	NA	NA	NA	Score=850;Name=lod=3787	NA	9q21.11	NA	NA	NA	NA	rs10781073	0.49	0.49	0.45	0.488818	0.6481	0.4345	0.4726	0.3154	0.6268	0.65	0.42	0.51	0.29	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.039584	NA	NA	NA	NA	NA	0.58	NA	4.3519
1217	1	43124859	43124859	C	T	intronic	PPIH	NA	NA	NA	UTR5	ENSG00000171960	ENST00000455203:c.-157C>T	NA	NA	NA	NA	1p34.2	NA	Name=BAF155	Name=52	NA	rs3738494	0.61	0.61	0.609	0.636781	0.5984	0.6458	0.5461	0.6634	0.6953	0.59	0.59	0.59	0.69	0.6196	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.912875	NA	NA	0.59686	0.648434	NA	0.58	NA	4.3518067
1217	8	24211331	24211331	G	A	exonic	ADAM28	NA	nonsynonymous SNV	ADAM28:NM_014265:exon22:c.G2293A:p.V765M	exonic	ENSG00000042980	NA	nonsynonymous SNV	ENSG00000042980:ENST00000265769:exon22:c.G2293A:p.V765M	NA	NA	8p21.2	NA	NA	NA	NA	rs7814768	0.99	0.99	0.991	0.967053	0.999	1	0.9914	0.9213	0.9448	1	1	0.99	0.95	0.9866	1	0.38	T	0.0	B	0.001	B	.	.	1.000	P	-0.895	N	4.8	T	-1.017	T	0.000	T	0.026	-1.091	0.151	-1.87	-0.631	0.095	10.575	-1.091269	NA	0.22	0.995928	0.94394	NA	0.986	NA	4.3518054
1217	22	24036657	24036657	T	C	ncRNA_exonic	GUSBP11	NA	NA	NA	ncRNA_exonic	ENSG00000228315	NA	NA	NA	NA	NA	22q11.23	NA	NA	NA	NA	rs2070448	0.17	0.17	0.148	0.15655	0.0924	0.2808	0.121	0.1422	0.1391	0.11	0.27	0.11	0.16	0.1366	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.919161	NA	NA	0.086628	0.149796	NA	0.159	NA	4.3510386
1217	10	70922159	70922159	T	C	intronic	VPS26A	NA	NA	NA	intronic	ENSG00000122958	NA	NA	NA	Score=688;Name=lod=831	NA	10q22.1	NA	NA	NA	NA	rs61871361	0.13	0.13	0.116	0.116414	0.2475	0.0367	0.1095	0.0946	0.0982	0.24	0.02	0.13	0.07	0.1921	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.664122	1.664122	NA	0.209381	0.105455	NA	0.196	NA	4.351019
1217	8	142173356	142173356	C	T	intronic	DENND3	NA	NA	NA	intronic	ENSG00000105339	NA	NA	NA	NA	NA	8q24.3	NA	Name=IRF4_(M-17),NFKB	NA	NA	rs428300	0.63	0.63	0.62	0.657548	0.6491	0.5288	0.6023	0.7337	0.7352	0.66	0.53	0.64	0.7	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.037801	NA	NA	NA	NA	NA	0.529	NA	4.3509
1217	12	120902007	120902007	T	C	intronic	SRSF9	NA	NA	NA	intronic	ENSG00000111786	NA	NA	NA	NA	NA	12q24.31	NA	Name=Pol2(phosphoS2)	NA	NA	rs542407	0.72	0.72	0.725	0.743011	0.6491	0.7391	0.6037	0.9493	0.6636	0.64	0.71	0.61	0.94	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.10052	NA	NA	NA	NA	NA	0.754	NA	4.3509
1217	7	75051375	75051375	T	C	exonic	POM121C	NA	synonymous SNV	POM121C:NM_001099415:exon13:c.A2160G:p.P720P	exonic	ENSG00000135213	NA	synonymous SNV	ENSG00000135213:ENST00000257665:exon11:c.A2886G:p.P962P,ENSG00000135213:ENST00000453279:exon13:c.A2160G:p.P720P	NA	NA	7q11.23	NA	NA	NA	NA	rs398016	0.27	0.27	0.18	0.289137	0.4702	0.2589	0.3069	0.152	0.3067	0.41	0.17	0.33	0.15	0.4161	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.636436	NA	NA	0.429848	0.161688	ID=COSM453389;OCCURENCE=1(breast)	NA	NA	4.3505186
1217	15	41476465	41476465	G	A	exonic	EXD1	NA	synonymous SNV	EXD1:NM_152596:exon10:c.C1209T:p.T403T	exonic	ENSG00000178997	NA	synonymous SNV	ENSG00000178997:ENST00000314992:exon10:c.C1209T:p.T403T,ENSG00000178997:ENST00000458580:exon12:c.C1383T:p.T461T	NA	NA	15q15.1	NA	NA	NA	NA	rs690733	0.48	0.48	0.506	0.523962	0.4423	0.2907	0.3833	0.8064	0.5665	0.42	0.3	0.41	0.84	0.4445	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.266884	NA	NA	0.429419	0.758284	NA	0.558	NA	4.3504476
1217	1	95710329	95710329	A	G	UTR3	TMEM56-RWDD3	NM_001199691:c.*523A>G	NA	NA	ncRNA_UTR3	ENSG00000122481,ENSG00000271092	NA	NA	NA	NA	NA	1p21.3	NA	NA	NA	NA	rs1062076	0.13	0.13	0.136	0.133586	0.1501	0.0952	0.1643	0.1271	0.1431	0.14	0.1	0.15	0.13	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.050877	NA	NA	NA	NA	NA	0.043	NA	4.3499
1217	1	95710381	95710381	T	C	UTR3	TMEM56-RWDD3	NM_001199691:c.*575T>C	NA	NA	ncRNA_UTR3	ENSG00000122481,ENSG00000271092	NA	NA	NA	NA	NA	1p21.3	NA	NA	NA	NA	rs2296309	0.13	0.13	0.127	0.133986	0.1501	0.0952	0.1643	0.1286	0.1431	0.14	0.1	0.15	0.13	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.651978	1.651978	NA	NA	NA	NA	0.043	NA	4.3499
1217	4	134496046	134496046	C	T	intergenic	PCDH10,PABPC4L	dist=383314;dist=621443	NA	NA	ncRNA_exonic	ENSG00000250191	NA	NA	NA	Score=587;Name=lod=324	NA	4q28.3	NA	NA	NA	NA	rs2640720	0.68	0.68	0.695	0.652756	0.6501	0.7113	0.5692	0.7602	0.5092	0.65	0.7	0.57	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.299552	NA	NA	NA	NA	NA	0.71	NA	4.3499
1217	22	21419799	21419799	C	T	intergenic	LOC400891,BCRP2	dist=1342;dist=37506	NA	NA	ncRNA_exonic	ENSG00000249680	NA	NA	NA	Score=614;Name=lod=416	NA	22q11.21	NA	NA	NA	NA	rs410356	0.53	0.53	0.543	0.511981	0.6501	0.1101	0.4524	0.8381	0.3855	0.66	0.11	0.49	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.695017	NA	NA	NA	NA	NA	0.696	NA	4.3499
1217	6	18572233	18572233	A	C	downstream	MIR548A1	NA	NA	NA	downstream	ENSG00000207775	NA	NA	NA	Score=243;Name=lod=13	NA	6p22.3	NA	NA	NA	NA	rs9396886	0.25	0.25	0.233	0.228035	0.3171	0.2153	0.3242	0.1293	0.2147	0.32	0.22	0.29	0.15	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.905174	NA	NA	NA	NA	NA	0.188	NA	4.3495666
1217	7	38471753	38471753	A	G	intronic	AMPH	NA	NA	NA	intronic	ENSG00000078053	NA	NA	NA	NA	NA	7p14.1	NA	Name=MafK_(ab50322)	NA	NA	rs10232299	0.17	0.17	0.155	0.148163	0.2455	0.0308	0.1297	0.2005	0.1115	0.24	0.05	0.17	0.22	0.181	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.50033	NA	NA	0.224419	0.216296	NA	0.159	NA	4.349081
1217	14	21793236	21793236	G	A	intronic	RPGRIP1	NA	NA	NA	intronic	ENSG00000092200	NA	NA	NA	NA	NA	14q11.2	Score=901;Name=V$NCX_01	NA	NA	NA	rs7157052	0.14	0.14	0.131	0.145168	0.2177	0.002	0.121	0.1808	0.1871	0.22	NA	0.12	0.19	0.1971	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.89038	NA	NA	0.236171	0.167684	NA	0.138	NA	4.349029
1217	6	111696257	111696257	G	A	exonic	REV3L	NA	synonymous SNV	REV3L:NM_002912:exon13:c.C3301T:p.L1101L	exonic	ENSG00000009413	NA	synonymous SNV	ENSG00000009413:ENST00000368802:exon13:c.C3301T:p.L1101L,ENSG00000009413:ENST00000358835:exon14:c.C3301T:p.L1101L,ENSG00000009413:ENST00000368805:exon14:c.C3301T:p.L1101L,ENSG00000009413:ENST00000435970:exon15:c.C3067T:p.L1023L	Score=687;Name=lod=828	NA	6q21	NA	NA	NA	NA	rs461646	0.59	0.59	0.577	0.586661	0.7893	0.4534	0.7435	0.3654	0.7035	0.78	0.47	0.72	0.35	0.7161	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.575326	NA	NA	0.812326	0.439174	NA	0.572	NA	4.3489406
1217	4	169842976	169842976	T	C	intronic	PALLD	NA	NA	NA	intronic	ENSG00000129116,ENSG00000145439	NA	NA	NA	NA	NA	4q32.3	NA	Name=Pol2,CTCF	NA	NA	rs17615157	0.58	0.58	0.55	0.56889	0.6511	0.9018	0.634	0.1172	0.7055	0.66	0.88	0.61	0.09	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.740254	NA	NA	NA	NA	NA	0.464	NA	4.3489
1217	7	24888620	24888620	T	C	intronic	OSBPL3	NA	NA	NA	intronic	ENSG00000070882	NA	NA	NA	NA	NA	7p15.3	Score=863;Name=V$TAL1BETAITF2_01	NA	NA	NA	rs757156	0.81	0.81	0.811	0.842452	0.6511	0.9861	0.781	0.9191	0.8313	0.65	0.99	0.75	0.9	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.644093	1.644093	NA	NA	NA	NA	0.855	NA	4.3489
1217	5	44310492	44310492	A	T	intronic	FGF10	NA	NA	NA	intronic	ENSG00000070193	NA	NA	NA	NA	NA	5p12	NA	NA	Name=3	NA	rs6881797	0.23	0.23	0.2	0.232628	0.2008	0.1796	0.379	0.2284	0.2219	0.21	0.18	0.34	0.26	0.2483	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.523981	NA	NA	0.202769	0.224114	ID=COSN167463;OCCURENCE=1(large_intestine)	0.217	NA	4.348131
1217	22	50280136	50280136	T	C	exonic	ZBED4	NA	synonymous SNV	ZBED4:NM_014838:exon2:c.T2826C:p.A942A	exonic	ENSG00000100426	NA	synonymous SNV	ENSG00000100426:ENST00000216268:exon2:c.T2826C:p.A942A	NA	NA	22q13.33	NA	Name=ZNF263	NA	NA	rs5770755	0.66	0.66	0.579	0.590056	0.7932	0.8264	0.8199	0.174	0.5368	0.79	0.81	0.8	0.17	0.7386	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.506657	NA	NA	0.786744	0.287789	NA	0.507	NA	4.3481226
1217	1	24418768	24418768	T	C	exonic	MYOM3	NA	synonymous SNV	MYOM3:NM_152372:exon11:c.A1128G:p.P376P	exonic	ENSG00000142661	NA	synonymous SNV	ENSG00000142661:ENST00000329601:exon11:c.A1128G:p.P376P,ENSG00000142661:ENST00000330966:exon11:c.A1131G:p.P377P,ENSG00000142661:ENST00000374434:exon11:c.A1128G:p.P376P	NA	NA	1p36.11	NA	NA	NA	NA	rs7556176	0.42	0.42	0.401	0.376198	0.4662	0.3522	0.3199	0.472	0.2188	0.48	0.32	0.35	0.48	0.4074	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.632019	NA	NA	0.445068	0.448568	NA	0.29	NA	4.3479986
1217	3	58186911	58186911	A	G	intronic	DNASE1L3	NA	NA	NA	intronic	ENSG00000163687	NA	NA	NA	NA	NA	3p14.3	NA	Name=EBF,Pbx3,PU.1,NFKB,EBF1_(C-8),TCF12	NA	NA	rs4234389	0.83	0.83	0.816	0.852436	0.6521	0.999	0.8199	0.9183	0.8415	0.67	1	0.8	0.9	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.226198	NA	NA	NA	NA	NA	0.906	NA	4.3479
1217	17	34431287	34431287	G	T	UTR5	CCL4	NM_002984:c.-12G>T	NA	NA	UTR5	ENSG00000129277	ENST00000250151:c.-12G>T,ENST00000394495:c.-12G>T	NA	NA	NA	NA	17q12	NA	Name=Pol2	Name=3	NA	rs1049750	0.94	0.94	NA	0.955671	0.998	0.994	0.9827	0.848	0.999	0.99	0.95	0.97	0.83	0.9876	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.534682	NA	NA	NA	NA	NA	NA	NA	4.3477334
1217	1	11018723	11018723	A	G	intronic	C1orf127	NA	NA	NA	intronic	ENSG00000175262	NA	NA	NA	NA	NA	1p36.22	NA	Name=NANOG_(SC-33759)	NA	NA	rs60676743	0.21	0.21	0.161	0.242013	0.2078	0.2282	0.33	0.0681	0.4642	0.23	0.24	0.3	0.08	0.2503	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.022685	NA	NA	0.194302	0.083976	NA	0.174	NA	4.347598
1217	9	93657761	93657761	A	T	intronic	SYK	NA	NA	NA	intronic	ENSG00000165025	NA	NA	NA	NA	NA	9q22.2	NA	Name=CTCF_(C-20),MafK_(ab50322),ZBTB7A_(SC-34508),c-Myc,TCF4,Rad21,CTCF	Name=32	NA	rs158689	0.56	0.56	0.547	0.595647	0.5567	0.4097	0.6196	0.7436	0.6104	0.58	0.41	0.58	0.71	0.5656	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.227555	NA	NA	0.530349	0.713118	ID=COSN168599;OCCURENCE=1(large_intestine)	0.638	NA	4.347351
1217	12	133312191	133312191	T	C	intronic	ANKLE2	NA	NA	NA	intronic	ENSG00000176915	NA	NA	NA	NA	NA	12q24.33	NA	Name=Pol2	NA	NA	rs10781637	0.67	0.67	0.664	0.636981	0.6531	0.7599	0.6931	0.5371	0.589	0.66	0.75	0.68	0.58	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.626883	NA	NA	NA	NA	NA	0.659	NA	4.3469
1217	15	53178012	53178012	T	C	intergenic	ONECUT1,WDR72	dist=95803;dist=627926	NA	NA	ncRNA_exonic	ENSG00000214896	NA	NA	NA	Score=796;Name=lod=2285	NA	15q21.3	NA	NA	NA	NA	rs2414185	0.62	0.62	0.58	0.569289	0.6531	0.7669	0.5663	0.4085	0.499	0.65	0.77	0.59	0.4	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.798453	NA	0.05	NA	NA	NA	0.609	NA	4.3469
1217	22	36707951	36707951	T	C	intronic	MYH9	NA	NA	NA	intronic	ENSG00000100345	NA	NA	NA	NA	NA	22q12.3	NA	NA	Name=26	NA	rs5756138	0.45	0.45	0.409	0.393371	0.6531	0.2073	0.6643	0.2141	0.3681	0.65	0.23	0.65	0.26	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.312121	NA	NA	NA	NA	NA	0.464	NA	4.3469
1217	7	84644346	84644346	C	G	intronic	SEMA3D	NA	NA	NA	intronic	ENSG00000153993	NA	NA	NA	NA	NA	7q21.11	NA	Name=CTCF,Nrf1	Name=19	NA	rs6468008	0.65	0.65	0.665	0.658546	0.5398	0.7589	0.6124	0.7284	0.6155	0.54	0.71	0.62	0.78	0.5684	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.54109	NA	NA	0.545	0.697231	NA	0.717	NA	4.3468
1217	19	56369593	56369593	T	C	exonic	NLRP4	NA	synonymous SNV	NLRP4:NM_134444:exon3:c.T834C:p.A278A	exonic	ENSG00000160505	NA	synonymous SNV	ENSG00000160505:ENST00000587891:exon1:c.T609C:p.A203A,ENSG00000160505:ENST00000301295:exon3:c.T834C:p.A278A,ENSG00000160505:ENST00000346986:exon3:c.T834C:p.A278A	NA	NA	19q13.43	NA	NA	NA	NA	rs421810	0.5	0.5	0.481	0.53135	0.4274	0.6657	0.4841	0.4523	0.6401	0.43	0.66	0.52	0.39	0.4756	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.36658	NA	NA	0.417326	0.44394	NA	0.507	NA	4.3463406
1217	22	17669199	17669199	G	A	intronic	CECR1	NA	NA	NA	intronic	ENSG00000093072	NA	NA	NA	NA	NA	22q11.1	NA	Name=CTCF	NA	NA	rs7284498	0.17	0.17	0.17	0.18131	0.2346	0.0962	0.1282	0.1755	0.2597	0.24	0.09	0.12	0.19	0.2044	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.972023	NA	NA	0.214884	0.161371	NA	0.159	NA	4.346116
1217	18	14377682	14377682	C	T	intergenic	CYP4F35P,CXADRP3	dist=35159;dist=100272	NA	NA	ncRNA_exonic	ENSG00000187589	NA	NA	NA	Score=519;Name=lod=172	NA	18p11.21	NA	NA	NA	NA	rs4797919	0.64	0.64	0.653	0.70607	0.6541	0.7798	0.5937	0.6868	0.7894	0.6	0.74	0.56	0.63	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.528887	NA	NA	NA	NA	NA	0.645	NA	4.3459
1217	21	47681127	47681127	T	C	intronic	MCM3AP	NA	NA	NA	intronic	ENSG00000160294	NA	NA	NA	NA	NA	21q22.3	NA	Name=c-Myc	NA	NA	rs2839180	0.51	0.51	0.464	0.492412	0.6541	0.3611	0.6499	0.3464	0.547	0.65	0.32	0.67	0.39	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.087176	NA	NA	NA	NA	NA	0.442	NA	4.3459
1217	1	109737132	109737132	T	C	exonic	KIAA1324	NA	synonymous SNV	KIAA1324:NM_001267049:exon7:c.T987C:p.T329T,KIAA1324:NM_001267048:exon13:c.T1776C:p.T592T,KIAA1324:NM_020775:exon15:c.T2037C:p.T679T	exonic	ENSG00000116299	NA	synonymous SNV	ENSG00000116299:ENST00000529753:exon13:c.T1776C:p.T592T,ENSG00000116299:ENST00000457623:exon14:c.T1887C:p.T629T,ENSG00000116299:ENST00000369939:exon15:c.T2037C:p.T679T	NA	NA	1p13.3	NA	NA	Name=22	NA	rs2359244	0.76	0.76	0.735	0.766573	0.7654	0.9702	0.8127	0.4667	0.9305	0.79	0.97	0.81	0.46	0.7948	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.45103	NA	NA	0.760581	0.48729	NA	0.797	NA	4.3458856
1217	2	91843403	91843403	T	C	ncRNA_exonic	LOC654342	NA	NA	NA	ncRNA_exonic	ENSG00000143429	NA	NA	NA	NA	NA	2p11.1	NA	NA	NA	NA	rs112527890	NA	NA	0.243	0.285343	0.3211	0.2718	0.281	0.261	0.2986	NA	NA	NA	NA	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.776042	NA	NA	NA	NA	NA	0.21	NA	4.3455666
1218	5	169568199	169568199	T	C	intergenic	FOXI1,C5orf58	dist=31470;dist=91751	NA	NA	ncRNA_exonic	ENSG00000253219	NA	NA	NA	Score=638;Name=lod=520	NA	5q35.1	NA	NA	NA	NA	rs1960003	0.53	0.53	0.495	0.519968	0.6551	0.4514	0.7104	0.2837	0.636	0.64	0.47	0.71	0.32	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.025116	NA	NA	NA	NA	NA	0.486	NA	4.3449
1218	5	169568640	169568640	G	A	intergenic	FOXI1,C5orf58	dist=31911;dist=91310	NA	NA	ncRNA_exonic	ENSG00000253219	NA	NA	NA	Score=563;Name=lod=259	NA	5q35.1	NA	NA	NA	NA	rs4867581	0.53	0.53	0.495	0.517772	0.6551	0.4425	0.7104	0.2829	0.635	0.64	0.46	0.71	0.32	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.499765	NA	NA	NA	NA	NA	0.486	NA	4.3449
1218	15	96931976	96931976	C	T	intergenic	NR2F2,SPATA8	dist=48484;dist=394703	NA	NA	ncRNA_exonic	ENSG00000259614	NA	NA	NA	Score=821;Name=lod=2885	NA	15q26.2	NA	NA	NA	NA	rs7496591	0.66	0.66	0.67	0.64976	0.6551	0.6835	0.549	0.6808	0.6391	0.67	0.67	0.62	0.67	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.677591	1.677591	NA	NA	NA	NA	0.717	NA	4.3449
1218	7	95034821	95034821	A	T	intronic	PON2	NA	NA	NA	intronic	ENSG00000105854	NA	NA	NA	Score=251;Name=lod=14	NA	7q21.3	NA	NA	NA	NA	rs9641164	0.3	0.3	0.289	0.283746	0.2296	0.622	0.3703	0.0325	0.2689	0.22	0.63	0.34	0.03	0.2403	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.190546	NA	NA	0.185233	0.071266	ID=COSN168150;OCCURENCE=1(large_intestine)	0.275	NA	4.344867
1218	19	1054060	1054060	A	G	exonic	ABCA7	NA	synonymous SNV	ABCA7:NM_019112:exon26:c.A3528G:p.L1176L	exonic	ENSG00000064687	NA	synonymous SNV	ENSG00000064687:ENST00000435683:exon20:c.A3114G:p.L1038L,ENSG00000064687:ENST00000433129:exon25:c.A3528G:p.L1176L,ENSG00000064687:ENST00000263094:exon26:c.A3528G:p.L1176L	NA	NA	19p13.3	NA	NA	NA	NA	rs3752243	0.51	0.51	0.515	0.536142	0.4235	0.3819	0.4712	0.8003	0.5	0.44	0.4	0.47	0.76	0.4723	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.212907	NA	NA	0.426047	0.722424	NA	0.391	NA	4.3448196
1218	6	142860028	142860028	C	T	ncRNA_intronic	LOC153910	NA	NA	NA	ncRNA_intronic	ENSG00000236366	NA	NA	NA	NA	NA	6q24.2	NA	NA	NA	NA	rs263188	0.36	0.36	0.362	0.379792	0.3221	0.3571	0.3573	0.4932	0.3252	0.29	0.32	0.36	0.49	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.895327	NA	NA	NA	NA	NA	0.261	NA	4.3445666
1218	18	77067000	77067000	T	G	exonic	ATP9B	NA	synonymous SNV	ATP9B:NM_198531:exon15:c.T1539G:p.A513A	exonic	ENSG00000166377	NA	synonymous SNV	ENSG00000166377:ENST00000307671:exon15:c.T1539G:p.A513A,ENSG00000166377:ENST00000426216:exon15:c.T1539G:p.A513A	NA	NA	18q23	NA	NA	NA	NA	rs3760541	0.39	0.39	0.356	0.403355	0.4483	0.38	0.4481	0.3623	0.4049	0.43	0.35	0.46	0.32	0.4331	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.721486	1.721486	NA	0.44093	0.385611	NA	0.384	NA	4.3443366
1218	17	1943888	1943888	T	C	exonic	DPH1	NA	synonymous SNV	DPH1:NM_001383:exon9:c.T1011C:p.P337P	exonic	ENSG00000108963	NA	synonymous SNV	ENSG00000108963:ENST00000570477:exon8:c.T771C:p.P257P,ENSG00000108963:ENST00000263083:exon9:c.T1011C:p.P337P	NA	NA	17p13.3	NA	NA	Name=3	NA	rs2236375	0.84	0.84	0.831	0.816693	0.7575	0.9306	0.8761	0.8321	0.6973	0.76	0.92	0.86	0.85	0.7876	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.188428	NA	NA	0.777324	0.813901	NA	0.775	NA	4.3442426
1218	12	772673	772673	C	A	UTR5	NINJ2	NM_016533:c.-9G>T	NA	NA	ncRNA_exonic	ENSG00000177406	NA	NA	NA	NA	NA	12p13.33	NA	NA	Name=58	NA	rs4980959	0.38	0.38	0.355	0.370607	0.3946	0.375	0.4222	0.329	0.3609	0.4	0.4	0.39	0.32	0.3874	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.678636	NA	NA	0.37407	0.342261	NA	0.333	NA	4.34393
1218	3	186479009	186479009	A	G	intergenic	KNG1,EIF4A2	dist=16810;dist=22352	NA	NA	ncRNA_exonic	ENSG00000226652	NA	NA	NA	Score=698;Name=lod=915	NA	3q27.3	NA	NA	NA	NA	rs866601	0.73	0.73	0.748	0.748602	0.6561	0.8413	0.5951	0.8018	0.7853	0.67	0.83	0.59	0.81	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.524804	1.524804	NA	NA	NA	NA	0.703	NA	4.3439
1218	19	6141471	6141471	C	A	intronic	ACSBG2	NA	NA	NA	intronic	ENSG00000087903,ENSG00000130377	NA	NA	NA	NA	NA	19p13.3	NA	Name=SRF,TR4	NA	NA	rs10853992	0.65	0.65	0.589	0.607228	0.6561	0.6885	0.7075	0.4856	0.5665	0.66	0.71	0.71	0.5	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.336086	NA	NA	NA	NA	NA	0.565	NA	4.3439
1218	1	233767008	233767008	T	A	intronic	KCNK1	NA	NA	NA	UTR5	ENSG00000135750	ENST00000366620:c.-19T>A	NA	NA	NA	NA	1q42.2	NA	Name=TAL1_(SC-12984)	NA	NA	rs701224	0.4	0.4	0.433	0.428714	0.2465	0.3532	0.2723	0.8026	0.2996	0.25	0.35	0.28	0.79	0.315	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.139058	NA	NA	0.261929	0.719178	NA	0.42	NA	4.3432377
1218	1	233767023	233767023	A	G	intronic	KCNK1	NA	NA	NA	UTR5	ENSG00000135750	ENST00000366620:c.-4A>G	NA	NA	NA	NA	1q42.2	NA	Name=TAL1_(SC-12984)	NA	NA	rs701225	0.4	0.4	0.433	0.426318	0.2465	0.3532	0.2723	0.7995	0.2914	0.25	0.35	0.28	0.79	0.3157	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.695039	NA	NA	0.261678	0.718037	NA	0.42	NA	4.3427887
1218	2	96679384	96679384	C	T	ncRNA_intronic	FAHD2CP	NA	NA	NA	ncRNA_intronic	ENSG00000231584	NA	NA	NA	NA	NA	2q11.1	NA	NA	NA	NA	rs2579517	0.33	0.33	0.283	0.282149	0.3241	0.4613	0.3934	0.1021	0.2188	0.33	0.51	0.34	0.13	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.307048	NA	NA	NA	NA	NA	0.275	NA	4.3425666
1218	4	56235931	56235931	C	G	ncRNA_intronic	SRD5A3-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000249700	NA	NA	NA	NA	NA	4q12	NA	NA	NA	NA	rs819268	0.24	0.24	0.22	0.267173	0.3241	0.1052	0.2363	0.2375	0.4376	0.33	0.11	0.29	0.24	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.243285	NA	NA	NA	NA	NA	0.217	NA	4.3425666
1218	4	56236328	56236328	C	T	ncRNA_UTR3	SRD5A3	NA	NA	NA	ncRNA_UTR3	ENSG00000128039	NA	NA	NA	NA	NA	4q12	NA	NA	NA	NA	rs2538	0.24	0.24	0.233	0.267572	0.3241	0.1071	0.2363	0.2375	0.4376	0.33	0.12	0.29	0.24	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.494937	NA	NA	NA	NA	NA	0.217	NA	4.3425666
1218	1	12056440	12056440	C	T	intronic	MFN2	NA	NA	NA	intronic	ENSG00000116688	NA	NA	NA	NA	NA	1p36.22	NA	Name=CTCF,CTCF_(SC-5916)	NA	NA	rs2236056	0.63	0.63	0.637	0.653554	0.6581	0.6349	0.5533	0.6936	0.6851	0.66	0.58	0.56	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.229707	NA	NA	NA	NA	NA	0.572	NA	4.3419
1218	22	22735789	22735789	C	T	intergenic	LOC96610,ZNF280B	dist=58465;dist=102983	NA	NA	downstream	ENSG00000211651	NA	NA	NA	NA	NA	22q11.22	NA	Name=PU.1	NA	NA	rs7284647	0.14	0.14	0.138	0.145966	0.1581	0.001	0.1153	0.3003	0.0961	0.16	0.0017	0.13	0.3	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.244381	NA	NA	NA	NA	NA	0.116	NA	4.3419
1218	9	139837990	139837990	G	C	intronic	FBXW5	NA	NA	NA	intronic	ENSG00000159069	NA	NA	NA	NA	NA	9q34.3	NA	Name=GR	Name=3	NA	rs2271872	0.62	0.62	0.637	0.650958	0.5398	0.8323	0.4568	0.6921	0.6605	0.53	0.81	0.46	0.66	0.5844	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.230195	NA	NA	0.534101	0.655353	NA	0.674	NA	4.341699
1218	2	220405230	220405230	G	A	exonic	CHPF	NA	synonymous SNV	CHPF:NM_001195731:exon4:c.C717T:p.H239H,CHPF:NM_024536:exon4:c.C1203T:p.H401H	exonic	ENSG00000123989	NA	synonymous SNV	ENSG00000123989:ENST00000243776:exon4:c.C1203T:p.H401H,ENSG00000123989:ENST00000535926:exon4:c.C717T:p.H239H	NA	NA	2q35	NA	NA	NA	NA	rs6436154	0.36	0.36	0.339	0.311102	0.4523	0.2748	0.4841	0.2065	0.2219	0.46	0.27	0.44	0.23	0.4101	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.288676	NA	NA	0.462666	0.262716	NA	0.435	NA	4.3416006
1218	17	61987405	61987405	A	T	intronic	CSHL1	NA	NA	NA	exonic	ENSG00000204414	NA	synonymous SNV	ENSG00000204414:ENST00000450719:exon3:c.T306A:p.P102P,ENSG00000204414:ENST00000561003:exon3:c.T339A:p.P113P	NA	NA	17q23.3	NA	NA	NA	NA	rs2006122	0.21	0.21	0.183	0.197085	0.2624	0.0794	0.196	0.2731	0.1493	0.25	0.09	0.19	0.31	0.2296	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.419404	NA	NA	NA	NA	NA	0.159	NA	4.3413333
1218	15	28502279	28502279	A	G	exonic	HERC2	NA	synonymous SNV	HERC2:NM_004667:exon17:c.T2445C:p.G815G	exonic	ENSG00000128731	NA	synonymous SNV	ENSG00000128731:ENST00000261609:exon17:c.T2445C:p.G815G	Score=426;Name=lod=72	NA	15q13.1	NA	NA	NA	NA	rs11631797	0.49	0.49	0.409	0.442492	0.7863	0.3006	0.6225	0.2118	0.4192	0.8	0.26	0.61	0.18	0.6876	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.193951	NA	NA	0.851688	0.307308	NA	0.507	NA	4.3410786
1218	2	233599904	233599904	A	C	UTR5	GIGYF2	NM_015575:c.-4A>C,NM_001103148:c.-4A>C,NM_001103147:c.-4A>C,NM_001103146:c.-4A>C	NA	NA	UTR5	ENSG00000204120	ENST00000373566:c.-4A>C,ENST00000427233:c.-4A>C,ENST00000373563:c.-4A>C,ENST00000428883:c.-4A>C,ENST00000409480:c.-4A>C,ENST00000456491:c.-4A>C,ENST00000409547:c.-4A>C,ENST00000430720:c.-4A>C,ENST00000425040:c.-4A>C,ENST00000421433:c.-4A>C,ENST00000423659:c.-4A>C,ENST00000409196:c.-4A>C,ENST00000409451:c.-4A>C,ENST00000440945:c.-4A>C,ENST00000429187:c.-4A>C,ENST00000424038:c.-4A>C	NA	NA	Score=464;Name=lod=103	NA	2q37.1	NA	NA	NA	NA	rs11555646	0.29	0.29	0.266	0.359425	0.2853	0.3532	0.3055	0.2405	0.6411	0.28	0.32	0.29	0.25	0.3578	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.857258	4.857258	NA	0.349651	0.264185	ID=COSN166435;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.312	NA	4.3405824
1218	1	17265366	17265366	C	G	intronic	CROCC	NA	NA	NA	intronic	ENSG00000058453	NA	NA	NA	NA	NA	1p36.13	NA	NA	Name=9	NA	rs4269812	0.36	0.36	0.34	NA	NA	NA	NA	NA	NA	0.33	0.41	0.34	0.36	0.3435	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.046042	NA	NA	0.316457	0.376364	NA	0.261	NA	4.340043
1218	5	79584872	79584872	A	G	intergenic	SERINC5,LOC644936	dist=32974;dist=10045	NA	NA	ncRNA_exonic	ENSG00000249438	NA	NA	NA	Score=658;Name=lod=631	NA	5q14.1	NA	NA	NA	NA	rs6867389	0.78	0.78	0.778	0.796526	0.66	0.999	0.6744	0.7648	0.8579	0.66	1	0.69	0.76	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.68281	NA	NA	NA	NA	NA	0.746	NA	4.34
1218	6	8015821	8015821	T	C	ncRNA_exonic	EEF1E1-MUTED	NA	NA	NA	UTR3	ENSG00000188428	ENST00000397457:c.*61A>G,ENST00000244777:c.*473A>G,ENST00000543936:c.*61A>G	NA	NA	NA	NA	6p24.3	NA	NA	NA	NA	rs3734591	0.16	0.16	0.143	0.139976	0.16	0.1369	0.2046	0.1536	0.0583	0.16	0.14	0.2	0.14	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.208403	NA	NA	NA	NA	NA	0.138	NA	4.34
1218	19	36988338	36988338	T	C	intergenic	LOC728752,ZNF260	dist=6396;dist=13251	NA	NA	ncRNA_exonic	ENSG00000267091	NA	NA	NA	Score=763;Name=lod=1677	NA	19q13.12	NA	NA	NA	NA	rs2912428	0.53	0.53	0.515	0.538139	0.66	0.2579	0.5159	0.6233	0.6022	0.66	0.25	0.56	0.65	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.512421	2.512421	NA	NA	NA	NA	0.543	NA	4.34
1218	22	22425106	22425106	T	G	intergenic	TOP3B,VPREB1	dist=87959;dist=174094	NA	NA	ncRNA_exonic	ENSG00000254161	NA	NA	NA	NA	NA	22q11.22	NA	NA	Name=7	NA	rs743531	0.74	0.74	0.738	0.767372	0.66	0.6845	0.7637	0.9304	0.7454	0.65	0.68	0.75	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.136443	NA	NA	NA	NA	NA	0.812	NA	4.34
1218	20	43034693	43034693	C	T	intronic	HNF4A	NA	NA	NA	intronic	ENSG00000101076	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs745975	0.19	0.19	0.185	0.16873	0.2247	0.1915	0.1282	0.0885	0.2249	0.23	0.22	0.14	0.13	0.2008	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.566421	NA	NA	0.234767	0.103949	NA	0.254	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117237.2;CLNDSDB=.;CLNDSDBID=.	4.339733
1218	6	135941308	135941308	A	G	ncRNA_intronic	LINC00271	NA	NA	NA	ncRNA_exonic	ENSG00000226540	NA	NA	NA	NA	NA	6q23.3	NA	NA	NA	NA	rs3734213	0.31	0.31	0.278	0.309904	0.327	0.256	0.2752	0.3109	0.3712	0.35	0.24	0.31	0.33	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.019551	NA	NA	NA	NA	NA	0.268	NA	4.3396666
1218	22	32772911	32772911	T	C	ncRNA_intronic	LOC339666	NA	NA	NA	ncRNA_exonic	ENSG00000243519	NA	NA	NA	NA	NA	22q12.3	NA	NA	NA	NA	rs713906	0.38	0.38	0.393	0.428914	0.327	0.0833	0.4049	0.8192	0.3793	0.31	0.07	0.39	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.324604	NA	NA	NA	NA	NA	0.551	NA	4.3396666
1218	10	121551581	121551581	A	C	exonic	INPP5F	NA	synonymous SNV	INPP5F:NM_001243195:exon5:c.A645C:p.A215A	exonic	ENSG00000198825	NA	synonymous SNV	ENSG00000198825:ENST00000369081:exon3:c.A357C:p.A119A	NA	NA	10q26.11	NA	NA	NA	NA	rs2289306	0.36	0.36	0.342	0.413139	0.4463	0.2341	0.3501	0.329	0.7219	0.45	0.22	0.38	0.36	0.4367	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.264939	NA	NA	0.444186	0.345211	ID=COSM147058;OCCURENCE=1(stomach)	0.391	NA	4.3394806
1218	4	81309456	81309456	A	C	intronic	C4orf22	NA	NA	NA	ncRNA_exonic	ENSG00000232327	NA	NA	NA	Score=664;Name=lod=668	NA	4q21.21	NA	NA	NA	NA	rs4693021	0.94	0.94	0.92	0.93131	0.994	1	0.9885	0.7526	0.9969	0.99	1	0.99	0.73	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.054675	NA	1	NA	NA	NA	0.942	NA	4.3393333
1218	12	66859221	66859221	T	C	intronic	GRIP1	NA	NA	NA	intronic	ENSG00000155974	NA	NA	NA	Score=300;Name=lod=22	NA	12q14.3	NA	NA	NA	NA	rs12820901	0.23	0.23	0.234	0.2498	0.2167	0.129	0.1801	0.4561	0.1789	0.22	0.1	0.2	0.41	0.2132	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.12659	NA	NA	0.231042	0.427632	NA	0.203	NA	4.339058
1218	7	47407888	47407888	G	A	intronic	TNS3	NA	NA	NA	intronic	ENSG00000136205	NA	NA	NA	NA	NA	7p12.3	NA	Name=ZNF263,ERalpha_a	NA	NA	rs2255749	0.45	0.45	0.428	0.421725	0.661	0.3472	0.5418	0.1944	0.4744	0.65	0.34	0.57	0.2	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.763149	NA	NA	NA	NA	NA	0.507	NA	4.339
1218	16	18026736	18026736	G	A	intergenic	XYLT1,MIR3180-1	dist=461998;dist=469299	NA	NA	ncRNA_exonic	ENSG00000228071	NA	NA	NA	Score=758;Name=lod=1606	NA	16p12.3	NA	NA	NA	NA	rs1834943	0.63	0.63	0.619	0.621406	0.661	0.5407	0.6354	0.6513	0.6135	0.66	0.56	0.68	0.63	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.153902	NA	1	NA	NA	NA	0.696	NA	4.339
1218	16	2138218	2138218	A	C	intronic	TSC2	NA	NA	NA	intronic	ENSG00000103197	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs1800718	0.25	0.25	0.26	0.256989	0.2356	NA	0.2133	0.6157	0.09	0.23	NA	0.24	0.58	0.2067	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.509994	NA	NA	0.218953	0.542766	NA	0.312	CLINSIG=untested|probable-non-pathogenic;CLNDBN=Tuberous_sclerosis_syndrome|not_specified;CLNREVSTAT=not|single;CLNACC=RCV000042691.2|RCV000118712.2;CLNDSDB=GeneReviews:MedGen:OMIM:SNOMED_CT|.;CLNDSDBID=NBK1220:C0041341:191100:7199000|.	4.338747
1218	16	1306377	1306377	G	A	intronic	TPSD1	NA	NA	NA	intronic	ENSG00000095917	NA	NA	NA	NA	NA	16p13.3	Score=858;Name=V$GR_Q6	NA	NA	NA	rs3927397	0.26	0.26	0.216	0.260184	0.2207	0.1508	0.3386	0.3971	0.1728	0.21	0.15	0.32	0.42	0.2271	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.951727	NA	NA	0.213987	0.351936	NA	0.043	NA	4.338213
1218	6	117250182	117250182	C	T	intronic	RFX6	NA	NA	NA	intronic	ENSG00000185002	NA	NA	NA	NA	NA	6q22.1	NA	Name=KAP1	NA	NA	rs673055	0.3	0.3	0.286	0.340455	0.2286	0.4226	0.2911	0.2958	0.4663	0.23	0.41	0.27	0.29	0.2558	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.526832	NA	NA	0.177442	0.283023	NA	0.304	NA	4.338158
1218	17	48752890	48752890	G	A	intronic	ABCC3	NA	NA	NA	intronic	ENSG00000108846	NA	NA	NA	NA	NA	17q21.33	NA	NA	Name=3	NA	rs2072366	0.66	0.66	0.641	0.630391	0.662	0.7222	0.6844	0.441	0.7209	0.68	0.77	0.64	0.51	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.401489	1.401489	NA	NA	NA	NA	0.623	NA	4.338
1218	14	74206481	74206481	T	C	exonic	ELMSAN1	NA	synonymous SNV	ELMSAN1:NM_001043318:exon2:c.A231G:p.V77V,ELMSAN1:NM_194278:exon2:c.A231G:p.V77V	exonic	ENSG00000156030	NA	synonymous SNV	ENSG00000156030:ENST00000423556:exon1:c.A231G:p.V77V,ENSG00000156030:ENST00000286523:exon2:c.A231G:p.V77V,ENSG00000156030:ENST00000394071:exon2:c.A231G:p.V77V,ENSG00000156030:ENST00000435371:exon2:c.A231G:p.V77V	Score=441;Name=lod=83	NA	14q24.3	NA	NA	NA	NA	rs758774	0.87	0.87	0.885	0.86242	0.7654	0.9325	0.8213	0.9728	0.7699	0.75	0.97	0.83	0.98	0.798	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.329318	NA	NA	0.765487	0.93872	NA	0.848	NA	4.3377796
1218	7	142180737	142180737	T	A	intergenic	LOC730441,MTRNR2L6	dist=208669;dist=193394	NA	NA	exonic	ENSG00000211721	NA	nonsynonymous SNV	ENSG00000211721:ENST00000390368:exon2:c.A122T:p.Q41L	NA	NA	7q34	NA	NA	NA	NA	rs372013265	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4956	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.705684	NA	0.29	NA	NA	NA	NA	NA	4.3377334
1218	18	12075501	12075501	T	C	intergenic	IMPA2,ANKRD62	dist=44616;dist=18347	NA	NA	ncRNA_exonic	ENSG00000256616	NA	NA	NA	Score=778;Name=lod=1937	NA	18p11.21	NA	NA	NA	NA	rs10853217	0.59	0.59	0.62	0.626797	0.663	0.5933	0.5692	0.6853	0.5859	0.62	0.55	0.57	0.62	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.126609	NA	NA	NA	NA	NA	0.645	NA	4.337
1218	19	55144186	55144186	C	T	exonic	LILRB1	NA	synonymous SNV	LILRB1:NM_001081637:exon6:c.C933T:p.S311S,LILRB1:NM_001081638:exon6:c.C933T:p.S311S,LILRB1:NM_001081639:exon6:c.C933T:p.S311S,LILRB1:NM_006669:exon7:c.C933T:p.S311S	exonic	ENSG00000104972	NA	synonymous SNV	ENSG00000104972:ENST00000396315:exon5:c.C933T:p.S311S,ENSG00000104972:ENST00000396317:exon5:c.C933T:p.S311S,ENSG00000104972:ENST00000396321:exon5:c.C933T:p.S311S,ENSG00000104972:ENST00000418536:exon5:c.C933T:p.S311S,ENSG00000104972:ENST00000421584:exon5:c.C933T:p.S311S,ENSG00000104972:ENST00000427581:exon5:c.C1041T:p.S347S,ENSG00000104972:ENST00000448689:exon5:c.C933T:p.S311S,ENSG00000104972:ENST00000324602:exon6:c.C933T:p.S311S,ENSG00000104972:ENST00000396327:exon6:c.C933T:p.S311S,ENSG00000104972:ENST00000396332:exon6:c.C933T:p.S311S,ENSG00000104972:ENST00000434867:exon6:c.C933T:p.S311S,ENSG00000104972:ENST00000396331:exon7:c.C933T:p.S311S	NA	NA	19q13.42	NA	NA	NA	NA	rs272423	0.56	0.56	0.53	0.59365	0.7207	0.3611	0.464	0.6732	0.6871	0.69	0.29	0.53	0.67	0.609	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.371722	NA	NA	NA	NA	NA	0.478	NA	4.3369666
1218	20	25456888	25456888	A	G	exonic	NINL	NA	synonymous SNV	NINL:NM_025176:exon17:c.T3039C:p.S1013S	exonic	ENSG00000101004	NA	synonymous SNV	ENSG00000101004:ENST00000278886:exon17:c.T3039C:p.S1013S	NA	NA	20p11.21	NA	NA	NA	NA	rs437635	0.57	0.57	0.573	0.558107	0.4304	0.9067	0.3559	0.5356	0.5041	0.43	0.93	0.36	0.53	0.466	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.446555	NA	NA	0.433372	0.508625	NA	0.5	NA	4.3368946
1218	8	30210274	30210274	T	C	intergenic	MIR548O2,LOC100128750	dist=102061;dist=29361	NA	NA	ncRNA_exonic	ENSG00000127589	NA	NA	NA	Score=874;Name=lod=4749	NA	8p12	NA	NA	NA	NA	rs4349946	0.78	0.78	0.768	0.790535	0.664	0.8423	0.7709	0.9607	0.6513	0.64	0.85	0.77	0.94	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.666466	NA	NA	NA	NA	NA	0.717	NA	4.336
1218	15	100246936	100246936	T	C	exonic	MEF2A	NA	synonymous SNV	MEF2A:NM_001130928:exon6:c.T657C:p.N219N,MEF2A:NM_001130926:exon8:c.T861C:p.N287N,MEF2A:NM_001130927:exon8:c.T681C:p.N227N,MEF2A:NM_005587:exon9:c.T867C:p.N289N,MEF2A:NM_001171894:exon10:c.T861C:p.N287N	exonic	ENSG00000068305	NA	synonymous SNV	ENSG00000068305:ENST00000449277:exon7:c.T657C:p.N219N,ENSG00000068305:ENST00000453228:exon8:c.T861C:p.N287N,ENSG00000068305:ENST00000558812:exon8:c.T681C:p.N227N,ENSG00000068305:ENST00000354410:exon9:c.T867C:p.N289N,ENSG00000068305:ENST00000557785:exon9:c.T861C:p.N287N,ENSG00000068305:ENST00000338042:exon10:c.T888C:p.N296N,ENSG00000068305:ENST00000557942:exon10:c.T885C:p.N295N	NA	NA	15q26.3	NA	NA	Name=4	NA	rs325408	0.63	0.63	0.607	0.61242	0.7922	0.7103	0.6369	0.2057	0.8589	0.79	0.73	0.68	0.22	0.7471	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.284335	1.284335	NA	0.791375	0.318534	NA	0.652	NA	4.3359916
1218	11	43876813	43876813	A	C	UTR3	HSD17B12	NM_016142:c.*15A>C	NA	NA	ncRNA_UTR3	ENSG00000149084	NA	NA	NA	NA	NA	11p11.2	NA	NA	NA	NA	rs11037683	0.06	0.06	0.061	0.0503195	0.0497	0.0437	0.0274	0.084	0.0286	0.05	0.05	0.02	0.11	0.0552	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.676435	1.676435	NA	0.059419	0.070132	NA	0.058	NA	4.335681
1218	11	43876829	43876829	A	G	UTR3	HSD17B12	NM_016142:c.*31A>G	NA	NA	ncRNA_UTR3	ENSG00000149084	NA	NA	NA	NA	NA	11p11.2	NA	NA	NA	NA	rs11037684	0.06	0.06	0.056	0.0503195	0.0497	0.0437	0.0274	0.084	0.0286	0.05	0.05	0.02	0.11	0.0552	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.494866	NA	NA	0.059535	0.070132	NA	0.058	NA	4.335565
1218	13	23490396	23490396	C	T	intergenic	BASP1P1,SGCG	dist=18076;dist=264664	NA	NA	ncRNA_exonic	ENSG00000234685,ENSG00000262619	NA	NA	NA	Score=670;Name=lod=706	NA	13q12.12	NA	NA	NA	NA	rs9506966	0.55	0.55	0.495	0.527955	0.665	0.6528	0.611	0.1392	0.7249	0.67	0.68	0.63	0.17	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.097195	NA	NA	NA	NA	NA	0.536	NA	4.335
1218	20	2598019	2598019	C	T	intronic	TMC2	NA	NA	NA	intronic	ENSG00000149488	NA	NA	NA	NA	NA	20p13	NA	Name=EBF1_(C-8)	NA	NA	rs6083866	0.56	0.56	0.546	0.533946	0.665	0.5675	0.6412	0.2958	0.6104	0.65	0.56	0.65	0.35	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.032877	NA	0	NA	NA	NA	0.399	NA	4.335
1218	20	29873957	29873957	A	G	intergenic	DEFB115,DEFB116	dist=26522;dist=17058	NA	NA	ncRNA_exonic	ENSG00000224628	NA	NA	NA	Score=504;Name=lod=149	NA	20q11.21	NA	NA	NA	NA	rs4911194	0.71	0.71	0.701	0.760583	0.665	0.7609	0.7147	0.8759	0.7352	0.65	0.71	0.69	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.06605	NA	NA	NA	NA	NA	0.746	NA	4.335
1219	11	56467833	56467833	T	C	intronic	OR8U8	NA	NA	NA	upstream	ENSG00000174914	NA	NA	NA	NA	NA	11q12.1	NA	NA	Name=14	NA	rs73474897	0.5	0.5	0.4	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.4989	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.429468	NA	NA	NA	NA	NA	0.283	NA	4.3344333
1219	7	78256643	78256643	G	T	intronic	MAGI2	NA	NA	NA	intronic	ENSG00000187391	NA	NA	NA	NA	NA	7q21.11	Score=885;Name=V$OCT1_02	NA	NA	NA	rs38117	0.53	0.53	0.537	0.558706	0.666	0.3016	0.6182	0.5318	0.7076	0.66	0.31	0.64	0.52	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.048788	NA	NA	NA	NA	NA	0.572	NA	4.334
1219	1	163309219	163309219	A	T	exonic	NUF2	NA	synonymous SNV	NUF2:NM_031423:exon8:c.A558T:p.G186G,NUF2:NM_145697:exon8:c.A558T:p.G186G	exonic	ENSG00000143228	NA	synonymous SNV	ENSG00000143228:ENST00000271452:exon8:c.A558T:p.G186G,ENSG00000143228:ENST00000367900:exon8:c.A558T:p.G186G,ENSG00000143228:ENST00000497990:exon8:c.A558T:p.G186G,ENSG00000143228:ENST00000524800:exon8:c.A558T:p.G186G,ENSG00000143228:ENST00000442820:exon9:c.A558T:p.G186G	NA	NA	1q23.3	NA	NA	NA	NA	rs1509022	0.38	0.38	0.366	0.428514	0.4374	0.3512	0.4352	0.32	0.6411	0.44	0.32	0.43	0.32	0.4412	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.706845	NA	NA	0.454302	0.343849	NA	0.399	NA	4.3337646
1219	13	53035925	53035925	A	G	exonic	CKAP2	NA	nonsynonymous SNV	CKAP2:NM_001098525:exon4:c.A967G:p.I323V,CKAP2:NM_018204:exon4:c.A964G:p.I322V	exonic	ENSG00000136108	NA	nonsynonymous SNV	ENSG00000136108:ENST00000258607:exon4:c.A964G:p.I322V,ENSG00000136108:ENST00000378034:exon4:c.A964G:p.I322V,ENSG00000136108:ENST00000378037:exon4:c.A967G:p.I323V,ENSG00000136108:ENST00000490903:exon4:c.A820G:p.I274V	NA	NA	13q14.3	NA	NA	NA	NA	rs7335867	1	1	0.999	0.999601	1	1	1	0.9985	1	1	1	1	1	0.9998	1	.	.	0.0	B	0.001	B	0.751	N	1.000	P	-2.24	N	2.47	T	-1.002	T	0.000	T	0.001	-2.606	0	-1.67	-0.480	-0.290	7.368	-2.606433	NA	1	1	0.999092	NA	1	NA	4.3335334
1219	1	16918717	16918717	C	T	UTR5	NBPF1	NM_017940:c.-201G>A	NA	NA	UTR5	ENSG00000219481	ENST00000430580:c.-201G>A,ENST00000392963:c.-201G>A	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs3872321	NA	NA	0.287	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.781174	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	1	16918734	16918734	G	C	UTR5	NBPF1	NM_017940:c.-218C>G	NA	NA	UTR5	ENSG00000219481	ENST00000430580:c.-218C>G,ENST00000392963:c.-218C>G	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs3928093	NA	NA	0.317	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.142839	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	1	144531623	144531623	G	A	intergenic	LOC728875,PFN1P2	dist=9654;dist=79192	NA	NA	intergenic	ENSG00000236943,ENSG00000201699	dist=9653;dist=2415	NA	NA	NA	NA	1q21.1	NA	NA	Name=5	NA	rs7527805	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.800534	1.800534	NA	NA	NA	NA	NA	NA	4.3333334
1219	1	144951959	144951959	T	C	UTR3	PDE4DIP	NM_001195261:c.*238A>G,NM_001195260:c.*238A>G,NM_001002810:c.*238A>G,NM_022359:c.*238A>G	NA	NA	UTR3	ENSG00000178104	ENST00000369347:c.*238A>G,ENST00000369348:c.*238A>G	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs10752799	NA	NA	0.045	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.273777	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	1	144951973	144951973	T	C	UTR3	PDE4DIP	NM_001195261:c.*224A>G,NM_001195260:c.*224A>G,NM_001002810:c.*224A>G,NM_022359:c.*224A>G	NA	NA	UTR3	ENSG00000178104	ENST00000369347:c.*224A>G,ENST00000369348:c.*224A>G	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs480131	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.43229	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	2	97749417	97749417	C	T	UTR3	FAHD2B	NM_199336:c.*75G>A	NA	NA	UTR3	ENSG00000144199	ENST00000272610:c.*75G>A,ENST00000414820:c.*75G>A,ENST00000440566:c.*75G>A	NA	NA	NA	NA	2q11.2	NA	NA	NA	NA	rs140620633	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.149124	NA	NA	NA	NA	NA	0.007	NA	4.3333334
1219	2	129229000	129229000	C	A	intergenic	HS6ST1,LOC389033	dist=152829;dist=1451435	NA	NA	intergenic	ENSG00000238379,ENSG00000227653	dist=26228;dist=47362	NA	NA	Score=544;Name=lod=217	NA	2q14.3	NA	NA	NA	NA	rs77284340	NA	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.043013	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	4	3626315	3626315	C	T	intergenic	FLJ35424,LOC100133461	dist=33603;dist=49005	NA	NA	intergenic	ENSG00000216560,ENSG00000250681	dist=34584;dist=8441	NA	NA	Score=272;Name=lod=17	NA	4p16.3	NA	NA	NA	NA	rs67911037	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.758236	NA	NA	NA	NA	NA	0.413	NA	4.3333334
1219	4	3629261	3629261	C	G	intergenic	FLJ35424,LOC100133461	dist=36549;dist=46059	NA	NA	intergenic	ENSG00000216560,ENSG00000250681	dist=37530;dist=5495	NA	NA	NA	NA	4p16.3	NA	Name=c-Myc	NA	NA	rs12331611	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.664418	NA	NA	NA	NA	NA	0.5	NA	4.3333334
1219	4	190508304	190508304	G	A	intergenic	LOC401164,FRG1	dist=985242;dist=353670	NA	NA	intergenic	ENSG00000205100,ENSG00000250739	dist=111958;dist=72455	NA	NA	NA	NA	4q35.2	NA	NA	Name=4	NA	rs113952125	NA	NA	0.005	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.117624	NA	NA	NA	NA	NA	0.022	NA	4.3333334
1219	4	190584869	190584869	A	G	intergenic	LOC401164,FRG1	dist=1061807;dist=277105	NA	NA	intergenic	ENSG00000250739,ENSG00000202215	dist=2229;dist=45824	NA	NA	NA	NA	4q35.2	NA	NA	Name=2	NA	rs2337579	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.156895	NA	NA	NA	NA	NA	0.5	NA	4.3333334
1219	4	190597771	190597771	G	C	intergenic	LOC401164,FRG1	dist=1074709;dist=264203	NA	NA	intergenic	ENSG00000250739,ENSG00000202215	dist=15131;dist=32922	NA	NA	NA	NA	4q35.2	NA	Name=CTCF	NA	NA	rs5023410	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.746657	NA	NA	NA	NA	NA	0.464	NA	4.3333334
1219	6	57512775	57512775	T	G	UTR3	PRIM2	NM_000947:c.*73T>G	NA	NA	UTR3	ENSG00000146143	ENST00000607273:c.*562T>G	NA	NA	NA	NA	6p11.2	NA	NA	NA	NA	rs7773110	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.234435	NA	NA	NA	NA	NA	0.5	NA	4.3333334
1219	6	57512779	57512779	G	T	UTR3	PRIM2	NM_000947:c.*77G>T	NA	NA	UTR3	ENSG00000146143	ENST00000607273:c.*566G>T	NA	NA	NA	NA	6p11.2	NA	NA	NA	NA	rs76296076	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.884764	NA	NA	NA	NA	NA	0.5	NA	4.3333334
1219	6	57512825	57512825	C	T	UTR3	PRIM2	NM_000947:c.*114C>T	NA	NA	UTR3	ENSG00000146143	ENST00000607273:c.*612C>T	NA	NA	NA	NA	6p11.2	NA	NA	NA	NA	rs72880943	NA	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.759347	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	6	57512826	57512826	A	G	UTR3	PRIM2	NM_000947:c.*115A>G	NA	NA	UTR3	ENSG00000146143	ENST00000607273:c.*613A>G	NA	NA	NA	NA	6p11.2	NA	NA	NA	NA	rs7752845	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.559217	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	7	64438403	64438403	G	A	UTR3	ZNF117	NM_015852:c.*94C>T	NA	NA	UTR3	ENSG00000152926	ENST00000282869:c.*94C>T	NA	NA	NA	NA	7q11.21	NA	Name=ZNF274	NA	NA	rs4718175	0.94	0.94	0.937	0.935703	1	1	0.9769	0.77	0.998	1	1	0.97	0.76	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.147316	NA	NA	NA	NA	NA	0.942	NA	4.3333334
1219	9	118250	118250	C	G	UTR5	FOXD4	NM_207305:c.-131G>C	NA	NA	UTR5	ENSG00000170122	ENST00000382500:c.-131G>C	NA	NA	NA	NA	9p24.3	NA	NA	NA	NA	rs6474602	0.25	0.25	0.188	NA	NA	NA	NA	NA	NA	0.26	0.08	0.3	0.42	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.711958	1.711958	NA	NA	NA	NA	0.014	NA	4.3333334
1219	9	66455320	66455320	A	G	intergenic	SPATA31A5,PTGER4P2-CDK2AP2P2	dist=945710;dist=38949	NA	NA	intergenic	ENSG00000235003,ENSG00000238113	dist=58207;dist=1965	NA	NA	NA	NA	9q13	NA	Name=SP1,PU.1,YY1_(C-20),SUZ12	NA	NA	rs7048070	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.376958	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	14	106094468	106094468	A	C	intergenic	TMEM121,ELK2AP	dist=97929;dist=41446	NA	NA	intergenic	ENSG00000211892,ENSG00000211893	dist=2065;dist=14921	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.057607	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	19	53411099	53411099	A	G	intergenic	ZNF320,ZNF816-ZNF321P	dist=16500;dist=19289	NA	NA	intergenic	ENSG00000182986,ENSG00000213793	dist=10153;dist=7350	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.112629	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	20	46524448	46524448	C	A	intergenic	SULF2,LINC00494	dist=109088;dist=464206	NA	NA	intergenic	ENSG00000251770,ENSG00000238785	dist=22431;dist=8644	NA	NA	NA	NA	20q13.13	NA	Name=HA-E2F1,CTCF	NA	NA	rs382980	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.618564	NA	NA	NA	NA	NA	0.449	NA	4.3333334
1219	20	46524469	46524469	T	C	intergenic	SULF2,LINC00494	dist=109109;dist=464185	NA	NA	intergenic	ENSG00000251770,ENSG00000238785	dist=22452;dist=8623	NA	NA	NA	NA	20q13.13	NA	Name=CTCF,GR,HA-E2F1	NA	NA	rs2426014	NA	NA	0.176	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.3795	NA	NA	NA	NA	NA	0.058	NA	4.3333334
1219	20	46524472	46524472	G	T	intergenic	SULF2,LINC00494	dist=109112;dist=464182	NA	NA	intergenic	ENSG00000251770,ENSG00000238785	dist=22455;dist=8620	NA	NA	NA	NA	20q13.13	NA	Name=CTCF,GR,HA-E2F1	NA	NA	rs28589966	NA	NA	0.053	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.602527	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	20	53968518	53968518	C	T	intergenic	DOK5,CBLN4	dist=700808;dist=603895	NA	NA	intergenic	ENSG00000185834,ENSG00000224008	dist=276833;dist=68356	NA	NA	NA	NA	20q13.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.828557	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	21	10614856	10614856	G	C	intergenic	TEKT4P2,TPTE	dist=646263;dist=291887	NA	NA	intergenic	ENSG00000270533,ENSG00000169861	dist=138795;dist=247766	NA	NA	NA	NA	21p11.2	NA	Name=CTCF	NA	NA	rs370129962	NA	NA	0.154	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.697051	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	21	10885068	10885068	G	C	intergenic	TEKT4P2,TPTE	dist=916475;dist=21675	NA	NA	intergenic	ENSG00000235476,ENSG00000223925	dist=12639;dist=14014	NA	NA	NA	NA	21p11.2	NA	NA	NA	NA	NA	NA	NA	0.001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.220923	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	21	11110260	11110260	G	A	intergenic	BAGE,NONE	dist=11323;dist=NONE	NA	NA	intergenic	ENSG00000187172,ENSG00000231962	dist=11280;dist=43577	NA	NA	NA	NA	21p11.1	NA	NA	Name=32	NA	rs11700397	NA	NA	0.471	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.838435	NA	NA	NA	NA	NA	0.406	NA	4.3333334
1219	21	46011170	46011170	T	C	UTR3	KRTAP10-6	NM_198688:c.*98A>G	NA	NA	UTR3	ENSG00000188155	ENST00000400368:c.*98A>G	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs233302	0.26	0.26	0.212	NA	NA	NA	NA	NA	NA	0.26	0.31	0.29	0.19	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.2739	NA	NA	NA	NA	NA	0.022	NA	4.3333334
1219	Y	13300027	13300027	G	A	intergenic	NONE,GYG2P1	dist=NONE;dist=1217888	NA	NA	intergenic	ENSG00000270570,ENSG00000263502	dist=36464;dist=40332	NA	NA	Score=633;Name=lod=497	NA	Yq11.1	NA	NA	NA	NA	rs3920736	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.624361	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	Y	13310719	13310719	G	A	intergenic	NONE,GYG2P1	dist=NONE;dist=1207196	NA	NA	intergenic	ENSG00000270570,ENSG00000263502	dist=47156;dist=29640	NA	NA	Score=578;Name=lod=297	NA	Yq11.1	NA	NA	NA	NA	rs79308907	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.331267	NA	NA	NA	NA	ID=COSN168834;OCCURENCE=1(large_intestine)	NA	NA	4.3333334
1219	Y	13310721	13310721	C	A	intergenic	NONE,GYG2P1	dist=NONE;dist=1207194	NA	NA	intergenic	ENSG00000270570,ENSG00000263502	dist=47158;dist=29638	NA	NA	Score=578;Name=lod=297	NA	Yq11.1	NA	NA	NA	NA	rs62599741	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.597425	NA	NA	NA	NA	ID=COSN168835;OCCURENCE=1(large_intestine)	NA	NA	4.3333334
1219	Y	13312756	13312756	A	G	intergenic	NONE,GYG2P1	dist=NONE;dist=1205159	NA	NA	intergenic	ENSG00000270570,ENSG00000263502	dist=49193;dist=27603	NA	NA	Score=501;Name=lod=145	NA	Yq11.1	NA	NA	NA	NA	rs79068638	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.427865	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	Y	13537278	13537278	G	A	intergenic	NONE,GYG2P1	dist=NONE;dist=980637	NA	NA	intergenic	ENSG00000183704,ENSG00000270242	dist=12561;dist=14097	NA	NA	Score=428;Name=lod=73	NA	Yq11.21	NA	NA	NA	NA	rs62604955	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.754449	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	Y	13541199	13541199	A	G	intergenic	NONE,GYG2P1	dist=NONE;dist=976716	NA	NA	intergenic	ENSG00000183704,ENSG00000270242	dist=16482;dist=10176	NA	NA	Score=426;Name=lod=72	NA	Yq11.21	NA	NA	NA	NA	rs75346021	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.671418	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	Y	13541232	13541232	A	T	intergenic	NONE,GYG2P1	dist=NONE;dist=976683	NA	NA	intergenic	ENSG00000183704,ENSG00000270242	dist=16515;dist=10143	NA	NA	Score=426;Name=lod=72	NA	Yq11.21	NA	NA	NA	NA	rs75435194	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.760369	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	Y	13541288	13541288	G	A	intergenic	NONE,GYG2P1	dist=NONE;dist=976627	NA	NA	intergenic	ENSG00000183704,ENSG00000270242	dist=16571;dist=10087	NA	NA	Score=289;Name=lod=20	NA	Yq11.21	NA	NA	NA	NA	rs78714833	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.874142	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	Y	28817222	28817222	G	A	intergenic	TTTY3B,NONE	dist=937687;dist=NONE	NA	NA	intergenic	ENSG00000237917,NONE	dist=36423;dist=NONE	NA	NA	NA	NA	Yq12	NA	NA	Name=61	NA	rs375099177	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.644602	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	Y	28817225	28817225	A	G	intergenic	TTTY3B,NONE	dist=937690;dist=NONE	NA	NA	intergenic	ENSG00000237917,NONE	dist=36426;dist=NONE	NA	NA	NA	NA	Yq12	NA	NA	Name=61	NA	rs372390542	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.515437	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	Y	28817240	28817240	A	G	intergenic	TTTY3B,NONE	dist=937705;dist=NONE	NA	NA	intergenic	ENSG00000237917,NONE	dist=36441;dist=NONE	NA	NA	NA	NA	Yq12	NA	NA	Name=61	NA	rs376722846	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.466206	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	Y	59017206	59017206	A	G	intergenic	NONE,SPRY3	dist=NONE;dist=83251	NA	NA	intergenic	ENSG00000235857,NONE	dist=15571;dist=NONE	NA	NA	NA	NA	Yq12	NA	NA	Name=36	NA	rs2527411	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.623943	NA	NA	NA	NA	NA	0.246	NA	4.3333334
1219	Y	59017238	59017238	A	G	intergenic	NONE,SPRY3	dist=NONE;dist=83219	NA	NA	intergenic	ENSG00000235857,NONE	dist=15603;dist=NONE	NA	NA	NA	NA	Yq12	NA	NA	Name=36	NA	rs7067355	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.083926	NA	NA	NA	NA	NA	0.007	NA	4.3333334
1219	GL000229.1	12461	12461	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000229.1	13276	13276	T	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000229.1	13746	13746	G	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000229.1	13903	13903	A	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000229.1	14222	14222	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000229.1	14307	14307	G	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000229.1	14341	14341	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000231.1	15424	15424	C	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000231.1	15440	15440	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000231.1	15442	15442	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000231.1	15459	15459	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000231.1	18127	18127	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000231.1	18281	18281	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000235.1	1594	1594	T	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000235.1	1654	1654	T	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000235.1	1681	1681	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000235.1	1849	1849	C	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000235.1	1882	1882	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000235.1	1960	1960	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000235.1	2122	2122	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000235.1	2133	2133	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000235.1	2145	2145	C	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000235.1	2151	2151	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000235.1	2158	2158	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000235.1	2264	2264	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000235.1	2296	2296	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000234.1	3322	3322	G	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000234.1	3369	3369	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000234.1	3451	3451	T	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000234.1	26422	26422	T	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000234.1	26441	26441	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000234.1	26488	26488	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000234.1	26621	26621	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000234.1	26634	26634	T	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000234.1	36715	36715	T	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000234.1	36766	36766	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000234.1	37119	37119	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000234.1	39730	39730	G	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000234.1	39838	39838	C	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000234.1	39855	39855	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000234.1	39864	39864	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000234.1	39866	39866	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000234.1	39942	39942	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000234.1	39971	39971	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000234.1	40012	40012	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000234.1	40030	40030	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000234.1	40037	40037	G	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000234.1	40120	40120	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000234.1	40145	40145	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000234.1	40162	40162	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000234.1	40187	40187	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000232.1	14607	14607	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000232.1	14642	14642	G	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000232.1	14668	14668	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000241.1	15958	15958	C	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000241.1	17108	17108	A	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000241.1	22733	22733	T	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000241.1	36669	36669	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000230.1	18278	18278	A	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000230.1	18347	18347	A	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000237.1	780	780	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000237.1	827	827	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000237.1	830	830	G	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000237.1	887	887	G	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000237.1	899	899	T	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000237.1	914	914	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000237.1	1832	1832	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000237.1	2522	2522	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000237.1	2523	2523	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000214.1	60969	60969	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000214.1	60970	60970	A	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000214.1	61084	61084	A	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000214.1	61096	61096	T	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000214.1	61201	61201	T	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000214.1	71653	71653	A	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000214.1	72177	72177	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000214.1	73334	73334	A	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000214.1	74787	74787	C	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000214.1	79094	79094	A	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000214.1	85528	85528	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000214.1	88040	88040	G	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000214.1	131759	131759	G	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000218.1	23674	23674	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000218.1	23711	23711	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000218.1	38943	38943	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000218.1	39835	39835	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000218.1	39922	39922	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000220.1	11446	11446	G	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000220.1	118436	118436	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000220.1	119111	119111	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000220.1	119177	119177	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000220.1	119178	119178	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000220.1	119190	119190	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000220.1	119223	119223	C	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000220.1	119255	119255	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000220.1	119256	119256	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000220.1	119534	119534	G	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000220.1	119559	119559	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000220.1	119567	119567	G	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000220.1	119577	119577	G	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000220.1	119684	119684	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000220.1	119822	119822	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000220.1	119880	119880	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000220.1	120442	120442	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000220.1	120493	120493	C	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000220.1	127312	127312	G	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000220.1	133605	133605	G	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000220.1	133607	133607	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000220.1	138641	138641	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000220.1	140059	140059	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000220.1	140190	140190	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000220.1	140608	140608	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000220.1	140745	140745	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000220.1	141518	141518	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000220.1	144134	144134	G	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000220.1	145368	145368	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	91677	91677	T	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	98226	98226	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	98261	98261	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	106787	106787	T	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	106864	106864	A	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	106906	106906	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	106944	106944	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	107086	107086	T	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	107173	107173	T	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	107220	107220	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	107321	107321	T	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	111222	111222	T	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	111242	111242	T	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	111243	111243	G	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	111299	111299	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	111311	111311	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	111312	111312	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	111370	111370	A	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	111393	111393	G	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	111426	111426	T	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	112356	112356	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	112361	112361	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	112371	112371	A	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	112430	112430	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	112671	112671	G	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	112719	112719	C	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	115226	115226	T	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	115260	115260	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	115285	115285	G	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	115298	115298	G	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	115320	115320	A	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	115366	115366	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	115383	115383	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	126964	126964	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	126988	126988	T	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	127060	127060	T	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	127090	127090	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	127097	127097	C	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	149001	149001	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	149236	149236	A	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	158651	158651	C	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	158670	158670	T	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000211.1	158694	158694	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000216.1	157070	157070	G	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000216.1	157088	157088	G	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000216.1	157163	157163	T	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000205.1	114274	114274	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000205.1	117169	117169	T	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000205.1	117350	117350	C	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000205.1	117447	117447	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000205.1	117582	117582	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000205.1	117705	117705	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000205.1	117887	117887	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000205.1	117916	117916	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000205.1	117996	117996	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000205.1	118008	118008	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000205.1	118065	118065	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000205.1	118259	118259	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000205.1	118358	118358	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000205.1	118386	118386	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000205.1	122928	122928	C	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000205.1	122945	122945	T	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000205.1	123036	123036	A	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000205.1	123107	123107	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000219.1	45348	45348	C	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000219.1	45774	45774	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000219.1	78859	78859	T	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000219.1	97375	97375	A	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000219.1	97396	97396	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000219.1	99352	99352	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000219.1	99355	99355	A	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000219.1	99403	99403	G	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000219.1	99488	99488	C	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000219.1	99499	99499	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000219.1	100253	100253	G	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000224.1	3473	3473	T	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000195.1	122	122	A	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000195.1	666	666	A	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000195.1	820	820	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000195.1	14496	14496	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000195.1	79700	79700	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000195.1	79733	79733	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000195.1	79784	79784	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000195.1	79796	79796	G	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000195.1	79917	79917	A	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000195.1	79958	79958	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000195.1	80067	80067	C	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000195.1	81568	81568	C	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000195.1	81576	81576	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000195.1	92304	92304	G	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000195.1	94666	94666	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000195.1	142923	142923	T	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000195.1	143059	143059	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000195.1	143066	143066	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000195.1	143826	143826	T	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000212.1	2286	2286	T	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000212.1	2794	2794	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000212.1	2809	2809	C	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000212.1	2823	2823	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000212.1	3202	3202	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000212.1	3213	3213	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000212.1	3225	3225	A	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000212.1	4736	4736	G	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000212.1	4833	4833	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000212.1	4923	4923	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000212.1	5005	5005	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000212.1	6313	6313	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000212.1	6338	6338	G	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000212.1	6513	6513	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000212.1	6623	6623	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000212.1	6626	6626	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000212.1	6841	6841	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000212.1	6852	6852	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000212.1	6930	6930	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000212.1	7002	7002	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000212.1	7015	7015	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000212.1	7089	7089	T	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000212.1	35319	35319	G	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000212.1	36107	36107	G	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000212.1	82788	82788	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000212.1	136038	136038	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000212.1	136251	136251	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000212.1	138469	138469	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000193.1	77475	77475	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000193.1	90948	90948	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000194.1	3143	3143	G	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000194.1	11224	11224	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000194.1	11304	11304	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000194.1	56183	56183	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000194.1	56462	56462	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000194.1	56472	56472	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000194.1	56924	56924	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000194.1	56940	56940	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000194.1	58531	58531	T	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000194.1	58592	58592	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000194.1	58593	58593	G	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	23416	23416	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	23422	23422	A	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	23482	23482	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	23601	23601	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	23730	23730	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	23796	23796	T	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	23812	23812	C	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	23892	23892	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	23893	23893	A	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	30052	30052	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	30114	30114	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	30171	30171	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	30206	30206	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	30282	30282	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	30302	30302	C	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	30353	30353	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	30430	30430	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	30450	30450	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	30463	30463	A	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	30527	30527	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	30535	30535	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	30551	30551	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	30576	30576	G	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	30594	30594	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	30658	30658	A	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	30659	30659	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	30742	30742	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	30827	30827	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	30852	30852	A	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	30855	30855	C	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	36463	36463	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	36486	36486	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	36491	36491	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	36596	36596	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	36627	36627	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	36646	36646	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	36647	36647	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	36660	36660	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	36679	36679	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	36690	36690	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	36710	36710	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	36782	36782	C	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	36810	36810	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	36954	36954	C	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	37589	37589	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	37605	37605	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	37607	37607	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	37672	37672	C	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	52844	52844	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	53190	53190	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	53216	53216	C	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	53472	53472	G	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	54097	54097	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	58143	58143	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	58154	58154	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	58202	58202	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	58334	58334	C	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	58393	58393	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	58438	58438	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	58449	58449	C	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	58458	58458	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	58541	58541	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	58627	58627	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	58644	58644	A	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	58669	58669	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	64301	64301	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	64344	64344	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	64405	64405	A	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	64427	64427	G	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	64532	64532	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	64607	64607	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	64657	64657	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	64677	64677	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	64685	64685	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	64688	64688	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	64725	64725	C	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	64754	64754	G	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	64766	64766	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	64899	64899	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	64918	64918	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	72420	72420	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	72639	72639	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	72657	72657	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	72779	72779	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	72828	72828	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	73175	73175	C	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	79301	79301	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	79338	79338	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	79411	79411	T	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	79419	79419	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	79508	79508	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	79533	79533	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	79554	79554	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	79562	79562	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	79607	79607	G	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	79795	79795	C	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	79846	79846	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	79848	79848	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	79942	79942	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	79943	79943	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	79977	79977	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	90070	90070	G	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	90080	90080	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	90195	90195	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	90219	90219	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	90282	90282	C	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	90324	90324	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	90351	90351	G	A	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	90393	90393	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	90401	90401	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	90426	90426	A	G	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000225.1	90427	90427	C	T	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000192.1	101228	101228	T	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	GL000192.1	101317	101317	A	C	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	intergenic	NONE,NONE	dist=NONE;dist=NONE	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.3333334
1219	1	1650657	1650657	C	G	intronic	CDK11A,CDK11B	NA	NA	NA	ncRNA_intronic	ENSG00000268575	NA	NA	NA	NA	NA	1p36.33	NA	NA	NA	NA	rs72909028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.054	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.044863	NA	NA	NA	NA	NA	0.036	NA	4.3333333
1219	1	1650960	1650960	G	A	intronic	CDK11A,CDK11B	NA	NA	NA	ncRNA_intronic	ENSG00000268575	NA	NA	NA	NA	NA	1p36.33	NA	NA	NA	NA	rs72634834	NA	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.058714	NA	NA	NA	NA	NA	0.022	NA	4.3333333
1219	1	1650967	1650967	T	C	intronic	CDK11A,CDK11B	NA	NA	NA	ncRNA_intronic	ENSG00000268575	NA	NA	NA	NA	NA	1p36.33	NA	NA	NA	NA	rs75384210	NA	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.219405	NA	NA	NA	NA	NA	0.043	NA	4.3333333
1219	1	1650996	1650996	T	C	intronic	CDK11A,CDK11B	NA	NA	NA	ncRNA_intronic	ENSG00000268575	NA	NA	NA	NA	NA	1p36.33	NA	NA	NA	NA	rs74223875	NA	NA	0.42	0.000199681	NA	NA	NA	0.0008	NA	NA	NA	NA	NA	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.598427	NA	NA	NA	NA	NA	0.377	NA	4.3333333
1219	1	1651003	1651003	G	A	intronic	CDK11A,CDK11B	NA	NA	NA	ncRNA_intronic	ENSG00000268575	NA	NA	NA	NA	NA	1p36.33	NA	NA	NA	NA	rs76941027	NA	NA	0.42	0.000399361	NA	NA	NA	0.0008	0.001	NA	NA	NA	NA	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.98149	NA	NA	NA	NA	NA	0.377	NA	4.3333333
1219	1	144863505	144863505	A	G	intronic	NBPF9,PDE4DIP	NA	NA	NA	ncRNA_intronic	ENSG00000255148	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs642016	NA	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.584531	NA	NA	NA	NA	NA	0.167	NA	4.3333333
1219	1	144863613	144863613	C	T	intronic	NBPF9,PDE4DIP	NA	NA	NA	ncRNA_intronic	ENSG00000255148	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs1699812	NA	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.532319	NA	NA	NA	NA	NA	0.5	NA	4.3333333
1219	1	144865627	144865627	T	C	intronic	NBPF9,PDE4DIP	NA	NA	NA	ncRNA_intronic	ENSG00000255148	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs745937	NA	NA	0.224	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.107938	NA	NA	NA	NA	NA	0.225	NA	4.3333333
1219	1	144877366	144877366	A	G	intronic	NBPF9,PDE4DIP	NA	NA	NA	ncRNA_exonic	ENSG00000266739	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs1807092	NA	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.252209	1.252209	NA	NA	NA	NA	0.5	NA	4.3333333
1219	2	39038213	39038213	G	C	intronic	DHX57	NA	NA	NA	ncRNA_exonic	ENSG00000223922	NA	NA	NA	Score=751;Name=lod=1503	NA	2p22.1	NA	NA	NA	NA	rs3099970	0.95	0.95	0.948	0.9373	1	1	0.9841	0.7708	1	1	1	0.99	0.8	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.350302	NA	NA	NA	NA	NA	0.949	NA	4.3333333
1219	3	187442662	187442662	G	C	ncRNA_intronic	LOC100131635	NA	NA	NA	intronic	ENSG00000113916,ENSG00000228804	NA	NA	NA	NA	NA	3q27.3	NA	NA	NA	NA	rs79388315	0.06	0.06	0.03	NA	NA	NA	NA	NA	NA	0.04	0.06	0.13	0.04	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.253606	1.253606	NA	NA	NA	NA	NA	NA	4.3333333
1219	3	195453562	195453562	A	C	intronic	MUC20	NA	NA	NA	ncRNA_intronic	ENSG00000242086	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs2550234	NA	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.096949	NA	NA	NA	NA	NA	0.239	NA	4.3333333
1219	5	79369213	79369213	G	T	intronic	THBS4	NA	NA	NA	ncRNA_intronic	ENSG00000249825	NA	NA	NA	NA	NA	5q14.1	NA	NA	NA	NA	rs3749685	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.087	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.256443	NA	NA	NA	NA	NA	0.109	NA	4.3333333
1219	5	147649568	147649568	G	C	intronic	SPINK13	NA	NA	NA	ncRNA_intronic	ENSG00000247199	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs2304030	0.19	0.19	0.2	NA	NA	NA	NA	NA	NA	0.02	0.29	0.07	0.45	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.655061	NA	NA	NA	NA	NA	0.181	NA	4.3333333
1219	11	18267373	18267373	C	T	intronic	SAA2,SAA2-SAA4	NA	NA	NA	ncRNA_intronic	ENSG00000255071	NA	NA	NA	NA	NA	11p15.1	NA	NA	NA	NA	rs1671927	0.74	0.74	0.682	NA	NA	NA	NA	NA	NA	0.83	0.81	0.71	0.51	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.369794	NA	NA	NA	NA	NA	0.667	NA	4.3333333
1219	11	56507816	56507816	A	C	intronic	OR8U8	NA	NA	NA	ncRNA_exonic	ENSG00000181325	NA	NA	NA	NA	NA	11q12.1	NA	NA	NA	NA	rs200224092	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.072351	NA	NA	NA	NA	NA	NA	NA	4.3333333
1219	11	56507852	56507852	A	G	intronic	OR8U8	NA	NA	NA	ncRNA_exonic	ENSG00000181325	NA	NA	NA	NA	NA	11q12.1	NA	NA	NA	NA	rs74213568	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.832435	NA	NA	NA	NA	NA	NA	NA	4.3333333
1219	15	76552958	76552958	A	G	intronic	ETFA	NA	NA	NA	ncRNA_exonic	ENSG00000259581	NA	NA	NA	NA	NA	15q24.2	NA	NA	NA	NA	rs79823946	NA	NA	0.049	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.247635	NA	NA	NA	NA	NA	NA	NA	4.3333333
1219	15	76553283	76553283	C	T	intronic	ETFA	NA	NA	NA	ncRNA_exonic	ENSG00000259581	NA	NA	NA	NA	NA	15q24.2	NA	NA	NA	NA	rs113276005	NA	NA	0.071	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.076694	NA	NA	NA	NA	NA	0.029	NA	4.3333333
1219	15	76553289	76553289	G	A	intronic	ETFA	NA	NA	NA	ncRNA_exonic	ENSG00000259581	NA	NA	NA	NA	NA	15q24.2	NA	NA	NA	NA	rs112025989	NA	NA	0.058	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.402791	NA	NA	NA	NA	NA	0.029	NA	4.3333333
1219	16	600768	600768	C	T	intronic	SOLH	NA	NA	NA	ncRNA_intronic	ENSG00000261691	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs148282840	NA	NA	0.197	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.156434	NA	NA	NA	NA	NA	NA	NA	4.3333333
1219	16	600840	600840	T	G	intronic	SOLH	NA	NA	NA	ncRNA_intronic	ENSG00000261691	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs113523397	NA	NA	0.221	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.067567	NA	NA	NA	NA	NA	NA	NA	4.3333333
1219	16	600843	600843	C	T	intronic	SOLH	NA	NA	NA	ncRNA_intronic	ENSG00000261691	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs111294892	NA	NA	0.085	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.128495	NA	NA	NA	NA	NA	NA	NA	4.3333333
1219	17	36398142	36398142	T	A	ncRNA_intronic	LOC440434	NA	NA	NA	intronic	ENSG00000174093	NA	NA	NA	NA	NA	17q12	NA	NA	NA	NA	rs138180351	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.462241	NA	NA	NA	NA	NA	0.022	NA	4.3333333
1219	20	29628158	29628158	G	A	ncRNA_intronic	FRG1B	NA	NA	NA	intronic	ENSG00000149531	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs73605203	NA	NA	0.323	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.434508	NA	NA	NA	NA	NA	NA	NA	4.3333333
1219	20	29628164	29628164	G	A	ncRNA_intronic	FRG1B	NA	NA	NA	intronic	ENSG00000149531	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs62199575	NA	NA	0.651	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.38479	NA	NA	NA	NA	NA	NA	NA	4.3333333
1219	21	11040748	11040748	G	A	intronic	BAGE2,BAGE3,BAGE4,BAGE5	NA	NA	NA	ncRNA_intronic	ENSG00000187172	NA	NA	NA	NA	NA	21p11.1	NA	NA	NA	NA	rs2775304	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.945607	NA	NA	NA	NA	NA	0.217	NA	4.3333333
1219	21	11047441	11047441	T	C	intronic	BAGE2,BAGE3,BAGE4,BAGE5	NA	NA	NA	ncRNA_intronic	ENSG00000187172	NA	NA	NA	NA	NA	21p11.1	NA	NA	NA	NA	rs3906136	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.165171	NA	NA	NA	NA	ID=COSN166604;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.254	NA	4.3333333
1219	21	11049395	11049395	T	C	intronic	BAGE2,BAGE3,BAGE4,BAGE5	NA	NA	NA	ncRNA_intronic	ENSG00000187172	NA	NA	NA	NA	NA	21p11.1	NA	NA	NA	NA	rs467462	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.147172	NA	NA	NA	NA	NA	0.601	NA	4.3333333
1219	21	40607920	40607920	G	A	intronic	BRWD1	NA	NA	NA	ncRNA_exonic	ENSG00000229623	NA	NA	NA	NA	NA	21q22.2	NA	NA	NA	NA	rs185570572	0.0018	0.0018	NA	0.000798722	NA	0.001	0.0043	NA	NA	NA	0.0035	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.881326	NA	NA	NA	NA	NA	NA	NA	4.3333333
1219	X	1748581	1748581	A	C	intronic	ASMT	NA	NA	NA	ncRNA_intronic	ENSG00000249358	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs6588807	0.37	0.37	0.36804	NA	NA	NA	NA	NA	NA	0.35	0.36	0.31	0.45	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.956652	NA	NA	NA	NA	NA	0.391	NA	4.3333333
1219	X	1748910	1748910	T	C	intronic	ASMT	NA	NA	NA	ncRNA_intronic	ENSG00000249358	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs28675287	0.21	0.21	0.16773	NA	NA	NA	NA	NA	NA	0.16	0.4	0.17	0.08	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.787812	NA	NA	NA	NA	NA	0.159	NA	4.3333333
1219	X	1755236	1755236	G	A	intronic	ASMT	NA	NA	NA	ncRNA_exonic	ENSG00000249358	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs4639690	0.36	0.36	0.37997	NA	NA	NA	NA	NA	NA	0.32	0.41	0.29	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.07268	NA	NA	NA	NA	NA	0.319	NA	4.3333333
1219	X	2692597	2692597	T	C	ncRNA_intronic	XGPY2	NA	NA	NA	intronic	ENSG00000124343	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs311157	0.54	0.54	0.50477	NA	NA	NA	NA	NA	NA	0.49	0.54	0.5	0.63	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.910467	NA	NA	NA	NA	NA	0.522	NA	4.3333333
1219	3	189587091	189587091	A	G	intronic	TP63	NA	NA	NA	intronic	ENSG00000073282	NA	NA	NA	NA	NA	3q28	NA	NA	Name=9	NA	rs6789961	0.29	0.29	0.296	0.3123	0.2157	0.1468	0.2046	0.6604	0.1881	0.21	0.14	0.23	0.62	0.2311	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.984742	NA	NA	0.22	0.571266	ID=COSN167117;OCCURENCE=1(large_intestine)	0.377	NA	4.3332
1219	17	6690583	6690583	G	A	intronic	FBXO39	NA	NA	NA	intronic	ENSG00000177294	NA	NA	NA	NA	NA	17p13.1	NA	NA	Name=23	NA	rs5016848	0.32	0.32	0.252	0.30631	0.2028	0.5813	0.3012	0.1891	0.2914	0.2	0.62	0.26	0.22	0.2552	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.736083	NA	NA	0.20907	0.197912	NA	0.246	NA	4.33293
1219	12	57649731	57649731	G	T	intronic	R3HDM2	NA	NA	NA	ncRNA_intronic	ENSG00000258830	NA	NA	NA	NA	NA	12q13.3	NA	NA	NA	NA	rs200593019	0	0	NA	0.000199681	NA	NA	0.0014	NA	NA	NA	NA	NA	NA	0.0003	0.0003	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.685846	NA	NA	0.000349	0	NA	NA	NA	4.3326843
1219	1	55378583	55378583	A	G	intergenic	DHCR24,TMEM61	dist=25662;dist=67882	NA	NA	intergenic	ENSG00000233203,ENSG00000143001	dist=24060;dist=67882	NA	NA	NA	NA	1p32.3	NA	NA	NA	NA	NA	NA	NA	NA	0.000599042	0.001	NA	NA	0.0015	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.234269	NA	NA	NA	NA	NA	NA	NA	4.3323334
1219	1	120336890	120336890	C	G	UTR3	REG4	NM_001159352:c.*351G>C,NM_032044:c.*351G>C	NA	NA	UTR3	ENSG00000134193	ENST00000354219:c.*351G>C,ENST00000256585:c.*351G>C	NA	NA	NA	NA	1p12	NA	NA	NA	NA	rs7540526	0.03	0.03	0.04	0.0319489	0.001	NA	0.0115	0.1142	NA	0.0013	NA	0.02	0.14	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.182024	NA	NA	NA	NA	NA	0.029	NA	4.3323334
1219	17	21217596	21217596	C	G	UTR3	MAP2K3	NM_145109:c.*54C>G,NM_002756:c.*54C>G	NA	NA	UTR3	ENSG00000034152	ENST00000342679:c.*54C>G,ENST00000395491:c.*1082C>G,ENST00000496046:c.*524C>G,ENST00000361818:c.*54C>G,ENST00000316920:c.*54C>G	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs2363373	NA	NA	NA	0.000199681	0.001	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.769885	NA	NA	NA	NA	NA	0.145	NA	4.3323334
1219	22	51015210	51015210	G	C	ncRNA_intronic	CHKB-CPT1B	NA	NA	NA	intronic	ENSG00000205560,ENSG00000254413	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs140515	0.74	0.74	0.731	0.00399361	0.001	NA	0.0043	0.003	0.0123	0.58	0.98	0.69	0.76	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.342568	NA	NA	NA	NA	NA	0.87	NA	4.3323333
1219	6	5973295	5973295	T	C	intergenic	FARS2,NRN1	dist=201479;dist=24938	NA	NA	ncRNA_exonic	ENSG00000215057	NA	NA	NA	Score=765;Name=lod=1710	NA	6p25.1	NA	NA	NA	NA	rs9392734	0.68	0.68	0.69	0.684105	0.668	0.4891	0.6571	0.9153	0.6084	0.67	0.48	0.66	0.92	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.241176	1.241176	NA	NA	NA	NA	0.797	NA	4.332
1219	10	15014418	15014418	C	G	intronic	MEIG1	NA	NA	NA	intronic	ENSG00000197889	NA	NA	NA	NA	NA	10p13	NA	Name=CTCF	NA	NA	rs1935400	0.6	0.6	0.578	0.63758	0.668	0.4752	0.7406	0.6437	0.6922	0.66	0.45	0.74	0.58	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.286868	NA	NA	NA	NA	ID=COSN163563;OCCURENCE=1(breast)	0.645	NA	4.332
1219	10	15014440	15014440	A	G	intronic	MEIG1	NA	NA	NA	intronic	ENSG00000197889	NA	NA	NA	NA	NA	10p13	NA	Name=CTCF	NA	NA	rs1935399	0.6	0.6	0.57	0.639577	0.668	0.4752	0.7435	0.6498	0.6922	0.66	0.45	0.74	0.58	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.320147	NA	NA	NA	NA	ID=COSN163564;OCCURENCE=1(breast),1(endometrium)	0.645	NA	4.332
1219	12	58068571	58068571	G	A	intergenic	B4GALNT1,OS9	dist=41549;dist=19167	NA	NA	ncRNA_exonic	ENSG00000242990	NA	NA	NA	Score=657;Name=lod=622	NA	12q13.3	NA	NA	NA	NA	rs774891	0.55	0.55	0.538	0.523163	0.668	0.3929	0.6254	0.5227	0.4366	0.65	0.34	0.65	0.57	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.121024	NA	NA	NA	NA	NA	0.587	NA	4.332
1219	15	66794352	66794352	G	A	intronic	RPL4	NA	NA	NA	intronic	ENSG00000174444	NA	NA	NA	NA	NA	15q22.31	NA	NA	Name=6	NA	rs74956204	0.14	0.14	0.112	0.157748	0.2286	0.1696	0.147	0.0166	0.271	0.22	0.11	0.19	0.01	0.2084	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.080148	NA	NA	0.23104	0.053082	NA	0.203	NA	4.33196
1219	1	186113617	186113617	A	T	ncRNA_intronic	MIR548F1	NA	NA	NA	intronic	ENSG00000143341	NA	NA	NA	NA	NA	1q31.1	NA	NA	NA	NA	rs200930507	0	0	NA	0.000798722	0.001	NA	0.0043	NA	NA	NA	NA	NA	NA	0.0004	0.0001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.217685	NA	NA	0.000116	0	NA	NA	NA	4.3318173
1219	16	29342546	29342546	T	C	ncRNA_intronic	SNX29P2	NA	NA	NA	ncRNA_intronic	ENSG00000198106,ENSG00000260413	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs9745639	0.42	0.42	0.344	0.563698	0.335	0.6062	0.5101	0.7421	0.5521	0.28	0.5	0.36	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.223723	NA	NA	NA	NA	NA	0.174	NA	4.3316666
1219	1	113992930	113992930	G	A	intronic	MAGI3	NA	NA	NA	ncRNA_exonic	ENSG00000232499	NA	NA	NA	NA	NA	1p13.2	NA	NA	NA	NA	rs184529904	0.0014	0.0014	NA	0.00179712	0.002	NA	0.0101	NA	NA	0.0013	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.172416	NA	NA	NA	NA	NA	NA	NA	4.3313333
1219	2	100916315	100916315	A	G	exonic	LONRF2	NA	synonymous SNV	LONRF2:NM_198461:exon5:c.T1131C:p.G377G	exonic	ENSG00000170500	NA	synonymous SNV	ENSG00000170500:ENST00000393437:exon5:c.T1131C:p.G377G,ENSG00000170500:ENST00000409647:exon5:c.T402C:p.G134G	NA	NA	2q11.2	NA	NA	NA	NA	rs11123823	0.34	0.34	0.336	0.290735	0.4851	0.4851	0.2392	0.028	0.2822	0.48	0.49	0.25	0.03	0.3865	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.579077	NA	NA	0.463837	0.107127	ID=COSM148913;OCCURENCE=1(stomach)	0.297	NA	4.3312296
1219	22	45731182	45731182	C	T	intronic	FAM118A	NA	NA	NA	intronic	ENSG00000100376	NA	NA	NA	NA	NA	22q13.31	NA	Name=CTCF,Rad21,NRSF,CTCF_(SC-5916)	Name=33	NA	rs738176	0.39	0.39	0.369	0.315695	0.5865	0.3175	0.5014	0.0371	0.2802	0.6	0.37	0.46	0.05	0.4817	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.184814	NA	NA	0.600581	0.123922	NA	0.239	NA	4.331219
1219	15	60678160	60678160	G	A	intronic	ANXA2	NA	NA	NA	intronic	ENSG00000182718	NA	NA	NA	NA	NA	15q22.2	NA	NA	Name=6	NA	rs3743268	0.3	0.3	0.26	0.26857	0.3429	0.4454	0.3069	0.031	0.3037	0.33	0.46	0.33	0.04	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.294621	NA	NA	0.325896	0.080202	NA	0.152	NA	4.331204
1219	1	55145554	55145554	T	C	ncRNA_intronic	HEATR8-TTC4	NA	NA	NA	intronic	ENSG00000184313,ENSG00000271723	NA	NA	NA	NA	NA	1p32.3	NA	NA	NA	NA	rs17110931	0.0041	0.0041	0.004	0.00778754	NA	NA	NA	0.0295	NA	NA	NA	NA	0.02	0.0021	0.021	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.888473	2.888473	NA	0.000241	0.021425	NA	0.007	NA	4.3309923
1219	2	95522747	95522747	C	G	ncRNA_exonic	ANKRD20A8P	NA	NA	NA	ncRNA_exonic	ENSG00000229089	NA	NA	NA	NA	NA	2q11.1	NA	NA	NA	NA	rs10874467	0.41	0.41	0.346	0.422524	0.336	0.4722	0.4481	0.5159	0.316	0.32	0.46	0.38	0.5	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.570999	NA	NA	NA	NA	ID=COSM443360;OCCURENCE=1(breast)	NA	NA	4.3306666
1219	7	134925411	134925411	G	A	exonic	STRA8	NA	synonymous SNV	STRA8:NM_182489:exon2:c.G201A:p.A67A	exonic	ENSG00000146857	NA	synonymous SNV	ENSG00000146857:ENST00000275764:exon2:c.G201A:p.A67A	NA	NA	7q33	NA	NA	NA	NA	rs7805859	0.37	0.37	0.356	0.390775	0.4553	0.2133	0.4063	0.3487	0.5532	0.46	0.21	0.4	0.4	0.4322	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.029759	NA	NA	0.448605	0.369723	NA	0.464	NA	4.3305616
1219	7	20768013	20768013	G	A	exonic	ABCB5	NA	synonymous SNV	ABCB5:NM_178559:exon14:c.G1467A:p.A489A,ABCB5:NM_001163941:exon23:c.G2802A:p.A934A	exonic	ENSG00000004846	NA	synonymous SNV	ENSG00000004846:ENST00000441315:exon3:c.G303A:p.A101A,ENSG00000004846:ENST00000258738:exon14:c.G1467A:p.A489A,ENSG00000004846:ENST00000404938:exon23:c.G2802A:p.A934A	NA	NA	7p21.1	NA	NA	NA	NA	rs10254317	0.62	0.62	0.607	0.596046	0.4294	0.6905	0.67	0.789	0.3569	0.43	0.72	0.64	0.79	0.4891	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.849121	NA	NA	0.417674	0.725601	NA	0.732	NA	4.3304926
1219	17	80559400	80559400	G	A	UTR3	FOXK2	NM_004514:c.*25G>A	NA	NA	UTR3	ENSG00000141568	ENST00000473637:c.*573G>A,ENST00000335255:c.*25G>A	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs369200935	NA	NA	NA	0.000199681	NA	NA	0.0014	NA	NA	NA	NA	NA	NA	0.0014	0.0015	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.181889	NA	NA	0.001512	0.000454	NA	NA	NA	4.3304214
1219	1	153431506	153431506	C	G	UTR5	S100A7	NM_002963:c.-17G>C	NA	NA	UTR5	ENSG00000143556	ENST00000368723:c.-17G>C,ENST00000368722:c.-17G>C	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs41323044	NA	NA	NA	0.00139776	0.002	0.002	0.0014	0.0015	NA	NA	NA	NA	NA	0.001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.753918	NA	NA	NA	NA	NA	NA	NA	4.3303334
1219	3	186793647	186793647	C	A	UTR3	ST6GAL1	NM_173216:c.*56C>A,NM_173217:c.*56C>A,NM_003032:c.*56C>A	NA	NA	UTR3	ENSG00000073849	ENST00000169298:c.*56C>A,ENST00000457772:c.*56C>A,ENST00000448044:c.*56C>A	NA	NA	NA	NA	3q27.3	NA	NA	NA	NA	rs112812625	0.01	0.01	0.011	0.00958466	0.003	NA	0.0173	0.0227	0.0031	0.0026	NA	0.02	0.04	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.89152	NA	NA	NA	NA	NA	NA	NA	4.3303334
1219	1	171561002	171561002	G	A	UTR3	PRRC2C	NM_015172:c.*16G>A	NA	NA	UTR3	ENSG00000117523	ENST00000367742:c.*16G>A,ENST00000338920:c.*16G>A,ENST00000495585:c.*16G>A	NA	NA	NA	NA	1q24.3	NA	NA	NA	NA	rs199644701	NA	NA	NA	0.000199681	NA	NA	0.0014	NA	NA	NA	NA	NA	NA	0.0012	0.0018	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.5321	NA	NA	0.001836	0.000813	NA	NA	NA	4.3302974
1219	9	137004956	137004956	C	T	UTR5	WDR5	NM_017588:c.-44C>T,NM_052821:c.-44C>T	NA	NA	UTR5	ENSG00000196363	ENST00000358625:c.-44C>T,ENST00000425041:c.-44C>T	NA	NA	NA	NA	9q34.2	NA	NA	NA	NA	rs189773125	0.0009	0.0009	NA	0.000798722	0.002	NA	0.0029	NA	NA	NA	NA	0.01	NA	0.0007	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.15649	NA	NA	0.000584	0.000227	NA	NA	NA	4.3300494
1219	1	157606294	157606294	T	A	intergenic	FCRL4,FCRL3	dist=38424;dist=41684	NA	NA	ncRNA_exonic	ENSG00000233712	NA	NA	NA	NA	NA	1q23.1	Score=803;Name=V$HTF_01	NA	NA	NA	rs2248138	0.76	0.76	0.761	0.774361	0.67	0.8165	0.7378	0.8767	0.726	0.68	0.83	0.71	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.749897	NA	NA	NA	NA	NA	0.703	NA	4.33
1219	6	5973890	5973890	A	G	intergenic	FARS2,NRN1	dist=202074;dist=24343	NA	NA	ncRNA_exonic	ENSG00000215057	NA	NA	NA	Score=620;Name=lod=440	NA	6p25.1	NA	NA	NA	NA	rs7763207	0.68	0.68	0.696	0.682109	0.67	0.4881	0.6571	0.907	0.6084	0.68	0.48	0.66	0.92	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.112936	NA	NA	NA	NA	NA	0.797	NA	4.33
1219	2	29940529	29940529	A	T	exonic	ALK	NA	synonymous SNV	ALK:NM_004304:exon2:c.T702A:p.P234P	exonic	ENSG00000171094	NA	synonymous SNV	ENSG00000171094:ENST00000389048:exon2:c.T702A:p.P234P,ENSG00000171094:ENST00000431873:exon2:c.T702A:p.P234P	Score=295;Name=lod=21	NA	2p23.2	NA	NA	NA	NA	rs2246745	0.64	0.64	0.615	0.589257	0.7913	0.7827	0.6902	0.1513	0.7025	0.79	0.8	0.73	0.17	0.7335	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.302086	NA	NA	0.811977	0.266001	NA	0.572	NA	4.3298896
1219	12	50599709	50599709	T	C	intronic	LIMA1	NA	NA	NA	intronic	ENSG00000050405	NA	NA	NA	NA	NA	12q13.12	NA	NA	Name=6	NA	rs2302900	0.25	0.25	0.248	0.286342	0.33	0.0764	0.2435	0.2973	0.4734	0.33	0.08	0.25	0.31	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.191795	NA	NA	0.340352	0.294075	NA	0.246	NA	4.329648
1219	3	185431377	185431377	G	A	ncRNA_intronic	C3orf65	NA	NA	NA	intronic	ENSG00000073792,ENSG00000163915	NA	NA	NA	NA	NA	3q27.2	NA	NA	NA	NA	rs185464872	0.0032	0.0032	NA	0.00199681	0.004	NA	0.0086	NA	NA	0.01	NA	0.01	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.146679	NA	NA	NA	NA	NA	0.007	NA	4.3293333
1219	7	23851038	23851038	C	T	intronic	STK31	NA	NA	NA	ncRNA_exonic	ENSG00000231328	NA	NA	NA	NA	NA	7p15.3	NA	NA	NA	NA	rs180955370	0.0018	0.0018	NA	0.00199681	0.004	NA	0.0029	NA	0.0041	0.0026	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.644821	NA	NA	NA	NA	NA	NA	NA	4.3293333
1219	13	25064749	25064749	G	A	intronic	PARP4	NA	NA	NA	ncRNA_intronic	ENSG00000243008	NA	NA	NA	NA	NA	13q12.12	NA	NA	NA	NA	rs117076504	0.0032	0.0032	0.002	0.00179712	0.004	NA	0.0058	0.0008	NA	0.004	NA	0.01	0.002	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.186286	NA	NA	NA	NA	NA	NA	NA	4.3293333
1219	2	197171104	197171104	G	A	intronic	HECW2	NA	NA	NA	intronic	ENSG00000138411	NA	NA	NA	Score=259;Name=lod=15	NA	2q32.3	NA	NA	NA	NA	rs6729640	0.64	0.64	0.602	0.601837	0.671	0.7817	0.719	0.3744	0.5695	0.67	0.78	0.65	0.41	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.965985	1.965985	NA	NA	NA	NA	0.493	NA	4.329
1219	4	9694662	9694662	T	C	intergenic	MIR548I2,DRD5	dist=136725;dist=88596	NA	NA	ncRNA_intronic	ENSG00000186234	NA	NA	NA	NA	NA	4p16.1	NA	Name=FOSL2	NA	NA	rs13103452	0.47	0.47	0.457	0.409944	0.671	0.4524	0.4798	0.0961	0.4724	0.66	0.45	0.56	0.13	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.243428	NA	NA	NA	NA	NA	0.377	NA	4.329
1219	10	69634202	69634202	A	G	intergenic	DNAJC12,SIRT1	dist=36265;dist=10225	NA	NA	ncRNA_exonic	ENSG00000219932	NA	NA	NA	Score=733;Name=lod=1272	NA	10q21.3	NA	NA	NA	NA	rs10997847	0.52	0.52	0.481	0.496406	0.671	0.1577	0.5403	0.6483	0.4294	0.67	0.17	0.57	0.67	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.127383	NA	NA	NA	NA	NA	0.565	NA	4.329
1219	10	69634366	69634366	A	C	intergenic	DNAJC12,SIRT1	dist=36429;dist=10061	NA	NA	ncRNA_exonic	ENSG00000219932	NA	NA	NA	Score=733;Name=lod=1272	NA	10q21.3	NA	NA	NA	NA	rs9794431	0.5	0.5	0.465	0.495607	0.671	0.1577	0.5389	0.6467	0.4284	0.65	0.16	0.56	0.63	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.672699	NA	NA	NA	NA	NA	0.659	NA	4.329
1219	10	121678896	121678896	C	G	intronic	SEC23IP	NA	NA	NA	intronic	ENSG00000107651	NA	NA	NA	NA	NA	10q26.11	NA	NA	Name=25	NA	rs2475300	0.74	0.74	0.735	0.751198	0.671	0.8363	0.7248	0.7821	0.7229	0.68	0.84	0.69	0.75	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.096992	NA	NA	NA	NA	NA	0.739	NA	4.329
1219	19	23405457	23405457	T	G	intergenic	ZNF730,ZNF724P	dist=75443;dist=1150	NA	NA	exonic	ENSG00000196081	NA	synonymous SNV	ENSG00000196081:ENST00000418100:exon4:c.A1590C:p.G530G	Score=417;Name=lod=66	NA	19p12	NA	NA	NA	NA	rs10411741	0.57	0.57	0.498	0.542532	0.6014	0.6637	0.6484	0.3268	0.5736	0.62	0.67	0.6	0.33	0.5697	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.16705	NA	NA	NA	NA	NA	0.428	NA	4.3289
1219	10	96043732	96043732	A	G	ncRNA_intronic	PLCE1-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000268894	NA	NA	NA	NA	NA	10q23.33	NA	NA	NA	NA	rs7084339	0.3	0.3	0.324	0.317292	0.338	0.2401	0.2161	0.4637	0.2495	0.32	0.2	0.22	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.972199	NA	NA	NA	NA	NA	0.326	NA	4.3286666
1219	9	77562903	77562903	C	T	UTR3	C9orf40	NM_017998:c.*61G>A	NA	NA	UTR3	ENSG00000135045	ENST00000376854:c.*61G>A	NA	NA	NA	NA	9q21.13	NA	NA	NA	NA	rs140264373	0.0014	0.0014	0.001	0.00139776	0.005	NA	0.0029	NA	NA	0.0026	NA	0.0028	NA	NA	0.0028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.200028	NA	NA	NA	NA	NA	NA	NA	4.3283334
1219	11	134522947	134522947	C	G	intergenic	LOC283177,NONE	dist=147392;dist=NONE	NA	NA	intergenic	ENSG00000254573,ENSG00000254989	dist=79997;dist=18373	NA	NA	NA	NA	11q25	NA	NA	NA	NA	NA	NA	NA	NA	0.00219649	0.005	NA	0.0014	0.0008	0.0041	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.960519	NA	NA	NA	NA	NA	NA	NA	4.3283334
1219	7	129842270	129842270	G	T	intronic	TMEM209	NA	NA	NA	ncRNA_intronic	ENSG00000240571	NA	NA	NA	NA	NA	7q32.2	NA	NA	NA	NA	rs116784448	0.01	0.01	0.015	0.0125799	0.005	NA	0.0058	0.0325	0.0112	0.01	NA	0.01	0.03	NA	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.343337	NA	NA	NA	NA	NA	0.029	NA	4.3283333
1219	2	173351962	173351962	T	G	intronic	ITGA6	NA	NA	NA	ncRNA_intronic	ENSG00000225205	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	rs114431200	0.01	0.01	0.011	0.0167732	NA	NA	0.0043	0.0613	NA	NA	NA	0.01	0.05	0.0048	0.051	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.385531	NA	NA	0.00035	0.0513	NA	0.029	NA	4.3281833
1219	2	113940681	113940681	T	C	exonic	PSD4	NA	synonymous SNV	PSD4:NM_012455:exon2:c.T648C:p.S216S	exonic	ENSG00000125637	NA	synonymous SNV	ENSG00000125637:ENST00000245796:exon2:c.T648C:p.S216S,ENSG00000125637:ENST00000441564:exon2:c.T648C:p.S216S	NA	NA	2q13	NA	NA	NA	NA	rs3748914	0.58	0.58	0.558	0.57528	0.4423	0.6042	0.5173	0.7375	0.5041	0.46	0.62	0.53	0.75	0.4877	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.425929	NA	NA	0.408488	0.68611	ID=COSM441019;OCCURENCE=1(breast)	0.601	NA	4.3281786
1219	17	7286326	7286326	T	A	exonic	TNK1	NA	synonymous SNV	TNK1:NM_001251902:exon2:c.T81A:p.L27L,TNK1:NM_003985:exon2:c.T81A:p.L27L	exonic	ENSG00000174292	NA	synonymous SNV	ENSG00000174292:ENST00000311668:exon2:c.T81A:p.L27L,ENSG00000174292:ENST00000576207:exon2:c.T81A:p.L27L,ENSG00000174292:ENST00000576812:exon2:c.T81A:p.L27L,ENSG00000174292:ENST00000570896:exon3:c.T81A:p.L27L	NA	NA	17p13.1	NA	NA	NA	NA	rs1554948	0.36	0.36	0.329	0.384585	0.4533	0.2579	0.3314	0.2965	0.6012	0.44	0.23	0.37	0.36	0.4243	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.591279	1.591279	NA	0.46096	0.314392	NA	0.442	NA	4.3281066
1219	9	84607758	84607758	T	A	exonic	SPATA31D1	NA	synonymous SNV	SPATA31D1:NM_001001670:exon4:c.T2373A:p.T791T	exonic	ENSG00000214929	NA	synonymous SNV	ENSG00000214929:ENST00000344803:exon4:c.T2373A:p.T791T	NA	NA	9q21.32	NA	NA	NA	NA	rs10867826	0.59	0.59	0.636	0.624201	0.4473	0.7024	0.4294	0.975	0.3896	0.4	0.66	0.4	0.95	0.4642	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.274372	NA	NA	0.427167	0.890282	NA	0.623	NA	4.3279996
1219	1	26496870	26496870	A	G	intronic	ZNF593	NA	NA	NA	ncRNA_exonic	ENSG00000236782	NA	NA	NA	NA	NA	1p36.11	NA	NA	Name=16	NA	rs2232654	0.44	0.44	0.411	0.460863	0.3161	0.6429	0.5259	0.348	0.5286	0.31	0.66	0.49	0.36	0.3859	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.588673	NA	NA	0.303721	0.380163	NA	0.442	NA	4.3276123
1219	8	125062071	125062071	C	G	intronic	FER1L6	NA	NA	NA	ncRNA_intronic	ENSG00000253868	NA	NA	NA	NA	NA	8q24.13	NA	NA	NA	NA	rs138771662	0.0027	0.0027	0.002	0.00139776	0.006	NA	NA	NA	0.001	0.01	NA	NA	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.068849	NA	NA	NA	NA	NA	NA	NA	4.3273333
1219	19	3546195	3546195	G	A	intronic	MFSD12	NA	NA	NA	ncRNA_intronic	ENSG00000267436	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs45558233	0.01	0.01	0.009	0.00559105	0.003	0.003	NA	0.0166	NA	0.004	0.0017	NA	0.02	0.0021	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.304583	NA	NA	0.000941	0.017483	NA	0.007	NA	4.3272923
1219	1	228497053	228497053	A	G	intronic	OBSCN	NA	NA	NA	intronic	ENSG00000154358	NA	NA	NA	NA	NA	1q42.13	NA	Name=CTCF	NA	NA	rs379620	0.71	0.71	0.702	0.698682	0.673	0.746	0.7147	0.8661	0.4387	0.65	0.72	0.7	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.123154	NA	NA	NA	NA	NA	0.674	NA	4.327
1219	2	102137903	102137903	G	C	intergenic	RFX8,MAP4K4	dist=46738;dist=176262	NA	NA	ncRNA_exonic	ENSG00000232556	NA	NA	NA	Score=661;Name=lod=647	NA	2q11.2	NA	NA	NA	NA	rs1848699	0.57	0.57	0.583	0.578474	0.673	0.5238	0.4078	0.6021	0.6268	0.66	0.49	0.47	0.59	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.828477	NA	NA	NA	NA	NA	0.543	NA	4.327
1219	6	76028757	76028757	G	A	intronic	FILIP1	NA	NA	NA	intronic	ENSG00000118407	NA	NA	NA	Score=719;Name=lod=1115	NA	6q14.1	NA	NA	NA	NA	rs4295446	0.61	0.61	NA	0.634984	0.673	0.4712	0.6124	0.7057	0.6851	0.67	0.44	0.63	0.68	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.892502	NA	NA	NA	NA	NA	0.703	NA	4.327
1219	14	21190532	21190532	T	C	intergenic	RNASE4,EDDM3A	dist=21774;dist=23567	NA	NA	ncRNA_exonic	ENSG00000259144	NA	NA	NA	Score=728;Name=lod=1210	NA	14q11.2	NA	NA	NA	NA	rs7157537	0.67	0.67	0.62	0.658746	0.673	0.7698	0.7262	0.466	0.7423	0.66	0.74	0.73	0.57	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.611842	NA	NA	NA	NA	NA	0.63	NA	4.327
1219	12	64488640	64488640	C	T	intronic	SRGAP1	NA	NA	NA	ncRNA_intronic	ENSG00000255886	NA	NA	NA	NA	NA	12q14.2	NA	NA	NA	NA	rs145882082	0.0032	0.0032	0.001	0.00179712	0.007	NA	0.0029	NA	NA	0.01	NA	0.01	0.002	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.276836	NA	NA	NA	NA	NA	0.007	NA	4.3263333
1219	5	110491712	110491712	T	C	intergenic	WDR36,CAMK4	dist=25512;dist=68235	NA	NA	ncRNA_intronic	ENSG00000250728	NA	NA	NA	Score=483;Name=lod=122	NA	5q22.1	NA	NA	NA	NA	rs183699	0.59	0.59	0.573	0.632987	0.674	0.4177	0.6873	0.6762	0.7157	0.67	0.4	0.67	0.63	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.094074	NA	NA	NA	NA	NA	0.63	NA	4.326
1219	6	27375611	27375611	A	C	intergenic	ZNF391,ZNF184	dist=6384;dist=42910	NA	NA	ncRNA_exonic	ENSG00000237154	NA	NA	NA	Score=654;Name=lod=607	NA	6p22.1	NA	NA	NA	NA	rs2076305	0.61	0.61	0.607	0.623203	0.674	0.5804	0.6758	0.5083	0.7331	0.67	0.55	0.65	0.55	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.069267	NA	NA	NA	NA	NA	0.601	NA	4.326
1219	9	7597988	7597988	C	T	intergenic	KDM4C,C9orf123	dist=422340;dist=198503	NA	NA	ncRNA_exonic	ENSG00000178654	NA	NA	NA	Score=671;Name=lod=711	NA	9p24.1	NA	NA	NA	NA	rs10976432	0.62	0.62	0.597	0.631789	0.674	0.6012	0.6282	0.6036	0.6605	0.68	0.6	0.59	0.57	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.607433	2.607433	NA	NA	NA	NA	0.674	NA	4.326
1219	14	21190526	21190526	A	C	intergenic	RNASE4,EDDM3A	dist=21768;dist=23573	NA	NA	ncRNA_exonic	ENSG00000259144	NA	NA	NA	Score=728;Name=lod=1210	NA	14q11.2	NA	NA	NA	NA	rs7152823	0.67	0.67	0.608	0.65655	0.674	0.7698	0.7176	0.4622	0.7413	0.66	0.74	0.73	0.57	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.43283	NA	NA	NA	NA	NA	0.609	NA	4.326
1219	7	143028536	143028536	G	A	intronic	CLCN1	NA	NA	NA	intronic	ENSG00000188037	NA	NA	NA	NA	NA	7q34	NA	Name=p300	NA	NA	rs2242493	0.68	0.68	0.654	0.641773	0.674	0.8294	0.6974	0.4985	0.5695	0.66	0.84	0.69	0.5	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.877617	NA	NA	NA	NA	NA	0.725	NA	4.326
1219	12	11420375	11420375	G	A	intronic	PRB3	NA	NA	NA	exonic	ENSG00000197870	NA	nonsynonymous SNV	ENSG00000197870:ENST00000381842:exon4:c.C682T:p.P228S,ENSG00000197870:ENST00000538488:exon5:c.C682T:p.P228S	NA	NA	12p13.2	NA	NA	NA	NA	rs11054201	0.8	0.8	0.819	0.806709	0.9553	0.7034	0.9524	0.6543	0.863	0.96	0.67	0.95	0.61	0.9144	0.97	0.16	T	.	.	.	.	.	.	1.000	P	.	.	3.23	T	-1.014	T	0.000	T	0.255	0.612	7.297	1.26	0.996	-0.004	8.457	0.612193	NA	0.36	0.971179	0.725984	NA	0.435	NA	4.3257877
1219	6	1726623	1726623	C	T	intronic	GMDS	NA	NA	NA	intronic	ENSG00000112699	NA	NA	NA	NA	NA	6p25.3	Score=809;Name=V$SRF_C	NA	NA	NA	rs960295	0.22	0.22	0.205	0.216454	0.1918	0.371	0.232	0.0567	0.2873	0.2	0.38	0.23	0.07	0.2512	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.335363	NA	NA	0.231628	0.098729	ID=COSN167675;OCCURENCE=1(large_intestine)	0.196	NA	4.325372
1219	4	40778146	40778146	C	T	exonic	NSUN7	NA	synonymous SNV	NSUN7:NM_024677:exon7:c.C906T:p.G302G	exonic	ENSG00000179299	NA	synonymous SNV	ENSG00000179299:ENST00000316607:exon7:c.C906T:p.G302G,ENSG00000179299:ENST00000381782:exon7:c.C906T:p.G302G	Score=608;Name=lod=393	NA	4p14	NA	NA	NA	NA	rs2465570	0.75	0.75	0.742	0.729034	0.7714	0.5208	0.8804	0.8744	0.5961	0.78	0.53	0.88	0.89	0.7671	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.68445	NA	NA	0.802977	0.867453	ID=COSM149666;OCCURENCE=1(stomach)	0.79	NA	4.3251896
1219	6	113544965	113544965	G	A	intergenic	RFPL4B,MARCKS	dist=872467;dist=633562	NA	NA	ncRNA_exonic	ENSG00000216904	NA	NA	NA	Score=737;Name=lod=1319	NA	6q21	NA	NA	NA	NA	rs796495	0.58	0.58	0.557	0.563099	0.675	0.6339	0.562	0.3343	0.6851	0.67	0.64	0.57	0.37	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.610377	NA	NA	NA	NA	NA	0.609	NA	4.325
1219	7	55743106	55743106	A	C	intergenic	VOPP1,FKBP9L	dist=102906;dist=5661	NA	NA	ncRNA_exonic	ENSG00000231317	NA	NA	NA	Score=399;Name=lod=56	NA	7p11.2	NA	NA	NA	NA	rs10235329	0.74	0.74	0.743	0.746006	0.675	0.7758	0.67	0.8775	0.6646	0.69	0.77	0.67	0.86	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.03041	NA	NA	NA	NA	NA	0.522	NA	4.325
1219	10	37284272	37284272	A	G	intergenic	FZD8,ANKRD30A	dist=1353910;dist=130513	NA	NA	ncRNA_exonic	ENSG00000225355	NA	NA	NA	Score=500;Name=lod=143	NA	10p11.21	NA	NA	NA	NA	rs10764117	0.66	0.66	0.644	0.686701	0.675	0.7946	0.6513	0.5567	0.7883	0.65	0.78	0.62	0.56	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.305816	NA	NA	NA	NA	NA	0.659	NA	4.325
1219	15	81410202	81410202	C	T	intergenic	MESDC1,C15orf26	dist=113857;dist=16442	NA	NA	ncRNA_exonic	ENSG00000259461	NA	NA	NA	Score=547;Name=lod=222	NA	15q25.1	NA	NA	NA	NA	rs2280440	0.47	0.47	0.492	0.42472	0.675	0.2599	0.4755	0.3911	0.3466	0.68	0.26	0.5	0.39	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.140845	NA	NA	NA	NA	NA	0.391	NA	4.325
1220	11	33097986	33097986	T	A	ncRNA_exonic	LINC00294	NA	NA	NA	ncRNA_exonic	ENSG00000213713	NA	NA	NA	NA	NA	11p13	NA	NA	NA	NA	rs2273554	0.3	0.3	0.266	0.305511	0.3419	0.4623	0.2161	0.1377	0.3967	0.35	0.42	0.26	0.13	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.014031	NA	NA	NA	NA	NA	0.239	NA	4.3247666
1220	5	70840233	70840233	C	T	exonic	BDP1	NA	synonymous SNV	BDP1:NM_018429:exon31:c.C6462T:p.L2154L	exonic	ENSG00000145734	NA	synonymous SNV	ENSG00000145734:ENST00000525844:exon5:c.C528T:p.L176L,ENSG00000145734:ENST00000358731:exon31:c.C6462T:p.L2154L,ENSG00000145734:ENST00000380675:exon31:c.C870T:p.L290L	NA	NA	5q13.2	NA	NA	NA	NA	rs182190	0.4	0.4	0.4	0.398962	0.4583	0.3591	0.3055	0.3797	0.4714	0.46	0.38	0.33	0.37	0.4266	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.084906	NA	NA	0.457101	0.363686	NA	0.391	NA	4.3246656
1220	17	72350277	72350277	T	G	intronic	KIF19	NA	NA	NA	intronic	ENSG00000196169	NA	NA	NA	NA	NA	17q25.1	NA	Name=SMC3_(ab9263),ATF3,YY1_(C-20),TAF7_(SQ-8),Znf143_(16618-1-AP),GABP,CTCF,Rad21,CTCF_(SC-5916),ZNF263,Pol2-4H8,JunD,TCF12,CCNT2,CTCF_(C-20)	Name=48	NA	rs2382642	0.53	0.53	0.542	0.527556	0.5676	0.4058	0.5245	0.621	0.4877	0.56	0.42	0.53	0.61	0.5403	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.60356	NA	NA	0.567571	0.631256	NA	0.616	NA	4.324529
1220	2	9628531	9628531	T	C	UTR3	IAH1	NM_001039613:c.*73T>C	NA	NA	UTR3	ENSG00000134330	ENST00000482918:c.*73T>C,ENST00000497473:c.*73T>C,ENST00000470914:c.*73T>C,ENST00000492223:c.*612T>C,ENST00000351760:c.*551T>C	NA	NA	NA	NA	2p25.1	NA	NA	NA	NA	rs137926529	0.0046	0.0046	0.01	0.00279553	0.0089	NA	0.0072	NA	NA	0.01	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.364415	NA	NA	NA	NA	NA	NA	NA	4.3244334
1220	6	3273214	3273214	C	T	UTR3	SLC22A23	NM_021945:c.*75G>A,NM_015482:c.*75G>A	NA	NA	UTR3	ENSG00000137266	ENST00000436008:c.*75G>A,ENST00000406686:c.*75G>A,ENST00000380302:c.*75G>A,ENST00000497691:c.*1067G>A,ENST00000490273:c.*75G>A	NA	NA	NA	NA	6p25.2	NA	NA	NA	NA	rs41301845	0.0046	0.0046	0.007	0.00399361	0.0089	NA	0.0101	NA	0.0041	0.01	NA	0.01	0.002	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.034709	NA	NA	NA	NA	NA	0.007	NA	4.3244334
1220	19	44612014	44612014	A	T	exonic	ZNF224	NA	synonymous SNV	ZNF224:NM_013398:exon6:c.A1701T:p.P567P	exonic	ENSG00000267680	NA	synonymous SNV	ENSG00000267680:ENST00000336976:exon6:c.A1701T:p.P567P	NA	NA	19q13.31	NA	Name=SETDB1	NA	NA	rs3200505	0.62	0.62	0.592	0.585463	0.8131	0.5367	0.5144	0.4085	0.6912	0.8	0.54	0.59	0.44	0.7107	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.059085	2.059085	NA	0.818637	0.456196	NA	0.674	NA	4.3242296
1220	2	10563236	10563236	G	A	intronic	HPCAL1	NA	NA	NA	exonic	ENSG00000115756	NA	nonsynonymous SNV	ENSG00000115756:ENST00000419810:exon6:c.G506A:p.G169D	NA	NA	2p25.1	NA	NA	NA	NA	rs55737425	0.16	0.16	0.162	0.163538	0.2903	0.0417	0.1585	0.1331	0.2035	0.27	0.03	0.17	0.14	0.2556	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.643935	1.643935	0	0.296628	0.162733	NA	0.254	NA	4.3241387
1220	4	9564999	9564999	T	C	intergenic	MIR548I2,DRD5	dist=7062;dist=218259	NA	NA	ncRNA_exonic	ENSG00000244004	NA	NA	NA	Score=787;Name=lod=2103	NA	4p16.1	NA	NA	NA	NA	rs9715222	0.52	0.52	0.52	0.467452	0.6759	0.496	0.5447	0.2042	0.5245	0.66	0.5	0.61	0.25	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.091313	NA	NA	NA	NA	NA	0.464	NA	4.3241
1220	4	62971707	62971707	C	T	intergenic	LPHN3,NONE	dist=33539;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000225405	NA	NA	NA	Score=683;Name=lod=796	NA	4q13.1	NA	NA	NA	NA	rs4358434	0.58	0.58	0.56	0.584864	0.6759	0.4226	0.6412	0.5325	0.6892	0.68	0.47	0.65	0.52	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.783453	NA	0.01	NA	NA	NA	0.652	NA	4.3241
1220	12	65528727	65528727	C	T	intergenic	WIF1,LEMD3	dist=13381;dist=34624	NA	NA	ncRNA_exonic	ENSG00000255700	NA	NA	NA	Score=259;Name=lod=15	NA	12q14.3	NA	NA	NA	NA	rs1157239	0.6	0.6	0.59	0.553514	0.6759	0.869	0.549	0.1831	0.6063	0.67	0.86	0.58	0.19	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.378336	2.378336	NA	NA	NA	NA	0.449	NA	4.3241
1220	10	123549691	123549691	T	G	exonic	ATE1	NA	synonymous SNV	ATE1:NM_001001976:exon11:c.A1371C:p.P457P,ATE1:NM_007041:exon11:c.A1371C:p.P457P	exonic	ENSG00000107669	NA	synonymous SNV	ENSG00000107669:ENST00000369040:exon9:c.A1083C:p.P361P,ENSG00000107669:ENST00000535655:exon9:c.A474C:p.P158P,ENSG00000107669:ENST00000543447:exon10:c.A1026C:p.P342P,ENSG00000107669:ENST00000224652:exon11:c.A1371C:p.P457P,ENSG00000107669:ENST00000369043:exon11:c.A1371C:p.P457P,ENSG00000107669:ENST00000540606:exon11:c.A1350C:p.P450P	NA	NA	10q26.13	NA	NA	NA	NA	rs35350755	0.49	0.49	0.48	0.501597	0.4284	0.5387	0.4813	0.4879	0.5716	0.43	0.55	0.53	0.48	0.4694	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.538393	1.538393	NA	0.444767	0.479346	NA	0.391	NA	4.3240996
1220	4	39483162	39483162	G	A	ncRNA_exonic	LOC401127	NA	NA	NA	ncRNA_exonic	ENSG00000224097	NA	NA	NA	NA	NA	4p14	NA	NA	NA	NA	rs11941935	0.33	0.33	0.287	0.33127	0.3429	0.3829	0.4164	0.0968	0.5225	0.36	0.42	0.43	0.09	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.934715	NA	NA	NA	NA	NA	0.254	NA	4.3237666
1220	19	15882980	15882980	A	G	ncRNA_intronic	CYP4F24P	NA	NA	NA	ncRNA_intronic	ENSG00000267594	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs3752143	0.12	0.12	0.095	0.156949	0.164	0.122	0.121	0.1475	0.2239	0.13	0.11	0.09	0.12	0.1792	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.998226	NA	NA	NA	NA	NA	NA	NA	4.3234666
1220	4	39460797	39460797	G	A	intronic	LIAS	NA	NA	NA	intronic	ENSG00000121897	NA	NA	NA	NA	NA	4p14	NA	Name=PAX5-C20,ELF1_(SC-631),HEY1,HMGN3,TAF1,Sin3Ak-20,TAF7_(SQ-8),Pol2-4H8,Pol2,PU.1,Mxi1_(bHLH),YY1,NANOG_(SC-33759)	NA	NA	rs2687959	0.2	0.2	0.178	0.197684	0.2276	0.2669	0.2622	0.0787	0.2106	0.2	0.26	0.25	0.09	0.2206	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.960505	NA	NA	0.228362	0.098137	NA	0.174	NA	4.323438
1220	19	15882981	15882981	T	G	ncRNA_intronic	CYP4F24P	NA	NA	NA	ncRNA_intronic	ENSG00000267594	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs3752142	0.12	0.12	0.095	0.161542	0.164	0.122	0.1484	0.1505	0.2239	0.13	0.11	0.09	0.12	0.1793	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.318323	NA	NA	NA	NA	NA	NA	NA	4.3233666
1220	6	44250165	44250165	A	G	exonic	TCTE1	NA	synonymous SNV	TCTE1:NM_182539:exon4:c.T978C:p.G326G	exonic	ENSG00000146221	NA	synonymous SNV	ENSG00000146221:ENST00000371505:exon4:c.T978C:p.G326G	NA	NA	6p21.1	Score=844;Name=V$AHRARNT_01	NA	NA	NA	rs516582	0.67	0.67	0.661	0.641573	0.7843	0.6012	0.8098	0.4675	0.6524	0.78	0.61	0.81	0.47	0.7508	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.001633	NA	NA	0.808256	0.533364	NA	0.667	NA	4.3233106
1220	1	55833351	55833351	A	G	intergenic	MIR4422,PPAP2B	dist=141955;dist=1127068	NA	NA	ncRNA_exonic	ENSG00000231900	NA	NA	NA	Score=783;Name=lod=2034	NA	1p32.3	NA	NA	NA	NA	rs910270	0.71	0.71	0.706	0.726837	0.6769	0.6786	0.6499	0.8442	0.7239	0.7	0.68	0.65	0.83	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.689333	NA	NA	NA	NA	NA	0.79	NA	4.3231
1220	7	128073470	128073470	A	C	intergenic	IMPDH1,HILPDA	dist=23434;dist=22414	NA	NA	downstream	ENSG00000228700	NA	NA	NA	Score=659;Name=lod=633	NA	7q32.1	NA	NA	NA	NA	rs12540808	0.12	0.12	0.122	0.126597	0.1769	0.121	0.1009	0.0416	0.2137	0.18	0.13	0.09	0.04	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.138864	NA	NA	NA	NA	NA	0.08	NA	4.3231
1220	14	106963326	106963326	G	A	intergenic	LINC00221,NONE	dist=11797;dist=NONE	NA	NA	exonic	ENSG00000211961	NA	nonsynonymous SNV	ENSG00000211961:ENST00000390621:exon1:c.C41T:p.A14V	NA	NA	14q32.33	NA	NA	NA	NA	rs12884037	0.11	0.11	0.116	0.0948482	0.1849	NA	0.0865	0.1354	0.0511	0.19	0.0017	0.08	0.15	0.1484	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.530344	NA	0.03	0.177043	0.126394	ID=COSN229339;OCCURENCE=1(skin)	0.116	NA	4.3229904
1220	16	15730245	15730245	G	A	intronic	KIAA0430	NA	NA	NA	intronic	ENSG00000166783	NA	NA	NA	NA	NA	16p13.11	NA	NA	Name=21	NA	rs4781677	0.12	0.12	0.111	0.0984425	0.2475	NA	0.1354	0.0492	0.0869	0.25	NA	0.15	0.05	0.1924	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.438114	NA	NA	0.237267	0.073793	NA	0.109	NA	4.322833
1220	8	21824547	21824547	A	G	intronic	XPO7	NA	NA	NA	intronic	ENSG00000130227	NA	NA	NA	NA	NA	8p21.3	NA	Name=PU.1,HDAC2_(SC-6296)	Name=36	NA	rs4872191	0.57	0.57	0.576	0.561302	0.5984	0.4861	0.3775	0.764	0.4571	0.6	0.48	0.42	0.75	0.5274	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.254479	NA	NA	0.55167	0.735442	NA	0.768	NA	4.32253
1220	19	8386998	8386998	T	C	intronic	RPS28	NA	NA	NA	intronic	ENSG00000233927	NA	NA	NA	NA	NA	19p13.2	NA	NA	Name=14	NA	rs4147644	0.29	0.29	0.264	0.267173	0.2266	0.2867	0.317	0.3638	0.1227	0.22	0.29	0.31	0.37	0.2442	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.303151	NA	NA	0.20688	0.31608	NA	0.362	NA	4.32232
1220	5	177613168	177613168	C	T	ncRNA_exonic	GMCL1P1	NA	NA	NA	ncRNA_exonic	ENSG00000244234	NA	NA	NA	Score=410;Name=lod=62	NA	5q35.3	NA	NA	NA	NA	rs13184406	0.52	0.52	0.459	0.491813	0.7197	0.4871	0.5476	0.1899	0.6309	0.71	0.51	0.57	0.2	0.6247	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.729654	NA	NA	NA	NA	NA	0.464	NA	4.3222666
1220	6	4979355	4979355	G	A	intergenic	CDYL,RPP40	dist=23577;dist=15925	NA	NA	ncRNA_exonic	ENSG00000217030	NA	NA	NA	Score=580;Name=lod=303	NA	6p25.1	NA	NA	NA	NA	rs2793224	0.76	0.76	0.77	0.757788	0.6779	0.9802	0.7104	0.6815	0.7474	0.68	0.99	0.71	0.67	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.374551	NA	NA	NA	NA	NA	0.775	NA	4.3221
1220	10	3161131	3161131	C	T	intronic	PFKP	NA	NA	NA	intronic	ENSG00000067057	NA	NA	NA	NA	NA	10p15.2	NA	Name=Pol2	NA	NA	rs3829914	0.7	0.7	0.701	0.687899	0.6779	0.8413	0.6412	0.5764	0.7239	0.68	0.85	0.64	0.59	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.902751	NA	NA	NA	NA	NA	0.667	NA	4.3221
1220	1	207131853	207131853	T	G	UTR3	FCAMR	NM_001170631:c.*8A>C,NM_032029:c.*142A>C,NM_001122979:c.*142A>C	NA	NA	UTR3	ENSG00000162897	ENST00000324863:c.*1815A>C,ENST00000400962:c.*142A>C,ENST00000324852:c.*8A>C,ENST00000450945:c.*142A>C	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs184963036	0.0009	0.0009	NA	0.000399361	0.002	NA	NA	NA	NA	0.0026	NA	NA	NA	0.0047	0.0047	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.436793	NA	NA	0.004714	0.004335	NA	NA	NA	4.3219194
1220	3	116746298	116746298	G	C	intergenic	LSAMP-AS3,IGSF11	dist=310411;dist=1873181	NA	NA	intronic	ENSG00000185565	NA	NA	NA	Score=694;Name=lod=882	NA	3q13.31	NA	NA	NA	NA	rs17662604	0.2	0.2	0.181	0.174521	0.3449	0.005	0.2248	0.1619	0.1554	0.35	0.0035	0.25	0.16	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.376239	NA	NA	NA	NA	NA	0.174	NA	4.3217667
1220	5	177612983	177612983	G	A	ncRNA_exonic	GMCL1P1	NA	NA	NA	ncRNA_exonic	ENSG00000244234	NA	NA	NA	Score=389;Name=lod=51	NA	5q35.3	NA	NA	NA	NA	rs13169133	0.51	0.51	0.459	0.485024	0.7207	0.4871	0.5461	0.1664	0.6278	0.71	0.51	0.57	0.18	0.6242	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.018569	NA	NA	NA	NA	NA	0.449	NA	4.3217666
1220	22	35799345	35799345	C	A	intronic	MCM5	NA	NA	NA	ncRNA_intronic	ENSG00000240293	NA	NA	NA	NA	NA	22q12.3	NA	NA	NA	NA	rs713688	0.0014	0.0014	0.002	0.00139776	0.004	NA	NA	0.0015	0.001	0.0026	NA	NA	0.002	0.0028	0.0049	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.667434	NA	NA	0.004884	0	NA	NA	NA	4.3216493
1220	17	3775916	3775916	T	C	exonic	CAMKK1	NA	synonymous SNV	CAMKK1:NM_032294:exon12:c.A1056G:p.P352P,CAMKK1:NM_172206:exon12:c.A1056G:p.P352P,CAMKK1:NM_172207:exon13:c.A1170G:p.P390P	exonic	ENSG00000004660	NA	synonymous SNV	ENSG00000004660:ENST00000348335:exon12:c.A1056G:p.P352P,ENSG00000004660:ENST00000381769:exon12:c.A1137G:p.P379P,ENSG00000004660:ENST00000158166:exon13:c.A1170G:p.P390P,ENSG00000004660:ENST00000381771:exon13:c.A1170G:p.P390P	Score=446;Name=lod=87	NA	17p13.2	NA	NA	NA	NA	rs7214864	0.61	0.61	0.579	0.629193	0.8012	0.4097	0.7478	0.4614	0.8211	0.8	0.39	0.77	0.45	0.7433	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.876647	NA	NA	0.800581	0.521788	NA	0.565	NA	4.3215856
1220	7	20883459	20883459	G	C	intergenic	RPL23P8,SP4	dist=16020;dist=584230	NA	NA	ncRNA_exonic	ENSG00000234839	NA	NA	NA	Score=696;Name=lod=902	NA	7p21.1	NA	NA	NA	NA	rs758090	0.66	0.66	0.649	0.677117	0.6789	0.5833	0.6427	0.7436	0.7065	0.68	0.56	0.64	0.73	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.609106	NA	NA	NA	NA	NA	0.688	NA	4.3211
1220	7	56142519	56142519	A	G	intronic	SUMF2	NA	NA	NA	intronic	ENSG00000129103	NA	NA	NA	NA	NA	7p11.2	NA	Name=HA-E2F1	NA	NA	rs4948104	0.67	0.67	0.643	0.641773	0.6789	0.7103	0.6628	0.5961	0.5798	0.69	0.71	0.65	0.62	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.654973	NA	NA	NA	NA	NA	0.674	NA	4.3211
1220	10	124328321	124328321	T	G	intronic	DMBT1	NA	NA	NA	intronic	ENSG00000187908	NA	NA	NA	Score=272;Name=lod=17	NA	10q26.13	NA	NA	NA	NA	rs3019529	0.68	0.68	0.659	0.688898	0.6789	0.7728	0.7767	0.5582	0.727	0.69	0.77	0.76	0.52	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.701059	1.701059	NA	NA	NA	NA	0.732	NA	4.3211
1220	11	50129760	50129760	T	C	intergenic	OR4C12,LOC441601	dist=125689;dist=109239	NA	NA	ncRNA_exonic	ENSG00000255442	NA	NA	NA	Score=454;Name=lod=93	NA	11p11.12	NA	NA	NA	NA	rs4881697	0.68	0.68	0.637	0.698283	0.6789	0.7837	0.7824	0.5439	0.7791	0.67	0.8	0.77	0.5	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.359123	NA	NA	NA	NA	NA	0.616	NA	4.3211
1220	17	78950462	78950462	C	T	intergenic	RPTOR,CHMP6	dist=10289;dist=15179	NA	NA	ncRNA_exonic	ENSG00000240270	NA	NA	NA	Score=708;Name=lod=1006	NA	17q25.3	NA	NA	NA	NA	rs2138121	0.72	0.72	0.732	0.750998	0.6789	0.7272	0.7075	0.8714	0.7178	0.65	0.72	0.66	0.86	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.886317	NA	NA	NA	NA	NA	0.826	NA	4.3211
1220	14	68045935	68045935	G	A	exonic	PLEKHH1	NA	synonymous SNV	PLEKHH1:NM_020715:exon21:c.G2934A:p.S978S	exonic	ENSG00000054690	NA	synonymous SNV	ENSG00000054690:ENST00000329153:exon21:c.G2934A:p.S978S	NA	NA	14q24.1	Score=953;Name=V$GATA1_01	NA	NA	NA	rs6573781	0.68	0.68	0.657	0.646965	0.7982	0.503	0.7579	0.5862	0.6431	0.8	0.53	0.76	0.59	0.7531	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.21815	NA	NA	0.794613	0.654339	NA	0.739	NA	4.3207536
1220	9	99674180	99674180	T	C	intergenic	LOC441454,NUTMG	dist=1443;dist=17106	NA	NA	intergenic	ENSG00000269907,ENSG00000227257	dist=1493;dist=7030	NA	NA	Score=414;Name=lod=64	NA	9q22.33	NA	NA	NA	NA	rs148066694	0.07	0.07	0.064	0.053115	0.0129	0.1925	0.0159	0.0068	0.0399	0.02	0.23	0.02	0.01	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.071163	NA	NA	NA	NA	NA	NA	NA	4.3204334
1220	21	47679168	47679168	G	C	intronic	MCM3AP	NA	NA	NA	ncRNA_exonic	ENSG00000215424	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs17182962	0.1	0.1	0.098	0.134585	0.0129	0.004	0.0562	0.4062	0.0828	0.01	0.0035	0.06	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.069085	NA	NA	NA	NA	NA	0.116	NA	4.3204333
1220	1	151732504	151732504	C	T	UTR3	MRPL9	NM_031420:c.*22G>A	NA	NA	UTR3	ENSG00000143436	ENST00000368830:c.*22G>A,ENST00000368829:c.*22G>A	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs148153971	0.0018	0.0018	0.003	0.00139776	0.003	NA	0.0043	NA	0.001	0.004	NA	0.0028	NA	0.0037	0.0064	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.298883	NA	NA	0.006395	0.001589	NA	NA	NA	4.3202384
1220	11	117858983	117858983	G	A	intronic	IL10RA	NA	NA	NA	intronic	ENSG00000110324	NA	NA	NA	NA	NA	11q23.3	NA	Name=EBF	NA	NA	rs4252248	0.78	0.78	0.778	0.771565	0.6799	0.9931	0.7968	0.6815	0.7413	0.68	0.99	0.75	0.72	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.033418	NA	NA	NA	NA	NA	0.746	NA	4.3201
1220	22	34986400	34986400	G	T	intergenic	LARGE,ISX	dist=669984;dist=475730	NA	NA	ncRNA_exonic	ENSG00000235485	NA	NA	NA	Score=736;Name=lod=1307	NA	22q12.3	NA	NA	NA	NA	rs874814	0.58	0.58	0.56	0.566494	0.6799	0.619	0.6686	0.2844	0.7045	0.68	0.64	0.68	0.28	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.130983	NA	NA	NA	NA	NA	0.522	NA	4.3201
1220	13	50465821	50465821	G	A	ncRNA_exonic	CTAGE10P	NA	NA	NA	ncRNA_exonic	ENSG00000181358	NA	NA	NA	NA	NA	13q14.2	NA	NA	NA	NA	rs7331776	0.15	0.15	0.124	0.136781	0.1879	0.001	0.2046	0.1914	0.1022	0.19	0.0017	0.22	0.21	0.1588	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.575068	NA	NA	NA	NA	NA	0.094	NA	4.3199666
1220	17	25758419	25758419	A	C	ncRNA_exonic	TBC1D3P5	NA	NA	NA	ncRNA_exonic	ENSG00000266433	NA	NA	NA	NA	NA	17q11.1	NA	NA	NA	NA	rs4795662	0.32	0.32	0.319	0.321486	0.3469	0.3155	0.4078	0.2171	0.3814	0.34	0.32	0.42	0.23	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.753429	NA	NA	NA	NA	NA	0.254	NA	4.3197666
1220	19	41448205	41448205	A	G	ncRNA_intronic	CYP2B7P1	NA	NA	NA	ncRNA_intronic	ENSG00000256612	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs8110485	0.26	0.26	0.262	0.221246	0.3469	0.2341	0.1844	0.1581	0.1902	0.35	0.27	0.2	0.17	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.477218	1.477218	NA	NA	NA	NA	0.268	NA	4.3197666
1220	14	70926395	70926395	T	A	UTR3	ADAM21	NM_003813:c.*10T>A	NA	NA	ncRNA_UTR3	ENSG00000139985	NA	NA	NA	NA	NA	14q24.2	NA	NA	NA	NA	rs45573638	0.03	0.03	0.022	0.0225639	0.0626	NA	0.0259	0.0023	0.0297	0.07	NA	0.03	0.01	0.0461	0.072	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.250503	1.250503	NA	0.071645	0.011834	NA	0.022	NA	4.319655
1220	8	146115367	146115367	A	G	exonic	ZNF250	NA	synonymous SNV	ZNF250:NM_001109689:exon3:c.T120C:p.G40G,ZNF250:NM_021061:exon3:c.T135C:p.G45G	exonic	ENSG00000196150	NA	synonymous SNV	ENSG00000196150:ENST00000292579:exon3:c.T135C:p.G45G,ENSG00000196150:ENST00000342660:exon3:c.T120C:p.G40G,ENSG00000196150:ENST00000417550:exon3:c.T120C:p.G40G,ENSG00000196150:ENST00000527049:exon3:c.T120C:p.G40G,ENSG00000196150:ENST00000528258:exon3:c.T120C:p.G40G,ENSG00000196150:ENST00000529780:exon3:c.T120C:p.G40G,ENSG00000196150:ENST00000533221:exon3:c.T120C:p.G40G,ENSG00000196150:ENST00000533543:exon3:c.T135C:p.G45G,ENSG00000196150:ENST00000533622:exon3:c.T120C:p.G40G,ENSG00000196150:ENST00000543949:exon3:c.T135C:p.G45G,ENSG00000196150:ENST00000525694:exon4:c.T120C:p.G40G	Score=493;Name=lod=134	NA	8q24.3	NA	NA	NA	NA	rs2735906	0.88	0.88	0.88	0.910942	0.7614	1	0.8746	0.9735	0.9141	0.76	1	0.85	0.97	0.8335	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.458033	1.458033	NA	0.752209	0.938266	NA	0.725	NA	4.3195576
1220	2	132113292	132113292	G	A	intergenic	LOC440910,WTH3DI	dist=55900;dist=4773	NA	NA	intergenic	ENSG00000115762,ENSG00000233087	dist=2010;dist=4774	NA	NA	Score=627;Name=lod=472	NA	2q21.1	NA	NA	NA	NA	rs111679476	0.01	0.01	0.012	0.00459265	0.0139	NA	0.0058	0.0015	0.0031	0.01	NA	0.01	0.002	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.224021	NA	NA	NA	NA	NA	NA	NA	4.3194334
1220	7	4308181	4308181	G	A	UTR3	SDK1	NM_152744:c.*3165G>A	NA	NA	UTR3	ENSG00000146555	ENST00000404826:c.*3165G>A	NA	NA	NA	NA	7p22.2	NA	NA	NA	NA	rs117603586	0.01	0.01	0.007	0.0363419	0.0139	0.001	0.0331	0.0015	0.1452	0.01	NA	0.03	0.0041	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.214968	NA	NA	NA	NA	NA	0.022	NA	4.3194334
1220	14	70924072	70924072	A	G	UTR5	ADAM21	NM_003813:c.-145A>G	NA	NA	ncRNA_UTR5	ENSG00000139985	NA	NA	NA	NA	NA	14q24.2	NA	NA	NA	NA	rs4143920	0.3	0.3	0.302	0.30631	0.1809	0.5268	0.17	0.4017	0.1759	0.18	0.51	0.17	0.35	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.041014	NA	NA	NA	NA	ID=COSN164725;OCCURENCE=1(breast)	0.196	NA	4.3191
1220	18	22597099	22597099	G	A	intergenic	LOC729950,ZNF521	dist=354937;dist=44789	NA	NA	ncRNA_exonic	ENSG00000229248	NA	NA	NA	Score=522;Name=lod=177	NA	18q11.2	NA	NA	NA	NA	rs2155853	0.65	0.65	0.647	0.65635	0.6809	0.5962	0.7089	0.6831	0.6196	0.67	0.56	0.75	0.65	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.897067	NA	NA	NA	NA	NA	0.71	NA	4.3191
1220	2	905889	905889	C	G	intergenic	LOC339822,SNTG2	dist=41777;dist=40665	NA	NA	downstream	ENSG00000234796	NA	NA	NA	NA	NA	2p25.3	NA	Name=PU.1,GABP	NA	NA	rs62103945	0.32	0.32	0.147	NA	NA	NA	NA	NA	NA	0.38	0.24	0.36	0.27	0.1811	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.625696	NA	NA	NA	NA	NA	NA	NA	4.3189
1220	10	124402677	124402677	A	G	exonic	DMBT1	NA	synonymous SNV	DMBT1:NM_004406:exon40:c.A5121G:p.P1707P,DMBT1:NM_017579:exon52:c.A6975G:p.P2325P,DMBT1:NM_007329:exon53:c.A7005G:p.P2335P	exonic	ENSG00000187908	NA	synonymous SNV	ENSG00000187908:ENST00000359586:exon25:c.A3165G:p.P1055P,ENSG00000187908:ENST00000330163:exon40:c.A5121G:p.P1707P,ENSG00000187908:ENST00000368956:exon40:c.A5121G:p.P1707P,ENSG00000187908:ENST00000344338:exon52:c.A6975G:p.P2325P,ENSG00000187908:ENST00000368955:exon52:c.A6975G:p.P2325P,ENSG00000187908:ENST00000338354:exon53:c.A7005G:p.P2335P,ENSG00000187908:ENST00000368909:exon53:c.A7005G:p.P2335P	NA	NA	10q26.13	NA	NA	NA	NA	rs1052715	0.59	0.59	0.597	0.64377	0.4125	0.6687	0.5029	0.8767	0.6411	0.41	0.66	0.52	0.86	0.5171	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.23479	NA	NA	0.418167	0.814797	NA	0.717	NA	4.3188996
1220	21	14414959	14414959	C	T	ncRNA_intronic	ANKRD30BP2	NA	NA	NA	ncRNA_intronic	ENSG00000224309	NA	NA	NA	NA	NA	21q11.2	NA	NA	NA	NA	rs8132212	NA	NA	0.213	0.364217	0.3479	0.3512	0.3674	0.3533	0.407	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.227406	NA	NA	NA	NA	NA	NA	NA	4.3187666
1220	19	6981763	6981763	G	A	ncRNA_exonic	EMR4P	NA	NA	NA	ncRNA_exonic	ENSG00000268758	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs2035970	0.15	0.15	0.127	0.154153	0.0885	0.2411	0.1484	0.0756	0.2423	0.1	0.27	0.14	0.08	0.1425	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.994001	NA	0.05	0.117119	0.078247	NA	0.072	NA	4.3185476
1220	3	49866401	49866401	C	T	UTR3	TRAIP	NM_005879:c.*135G>A	NA	NA	UTR3	ENSG00000183763	ENST00000331456:c.*135G>A	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs139394417	0.01	0.01	0.005	0.00439297	0.0149	NA	0.0014	0.0008	0.0051	0.02	NA	0.01	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.15788	NA	NA	NA	NA	NA	NA	NA	4.3184334
1220	14	23465542	23465542	T	A	intronic	C14orf93	NA	NA	NA	ncRNA_intronic	ENSG00000258457	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs139766694	0.01	0.01	0.004	0.00399361	0.0149	NA	0.0043	NA	0.002	0.01	NA	0.0028	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.75528	NA	NA	NA	NA	NA	NA	NA	4.3184333
1220	17	33428167	33428167	G	A	ncRNA_intronic	RAD51L3-RFFL	NA	NA	NA	intronic	ENSG00000185379,ENSG00000267618	NA	NA	NA	NA	NA	17q12	NA	NA	NA	NA	rs45496096	0.01	0.01	0.003	0.00419329	0.0149	NA	0.0072	NA	0.001	0.02	NA	0.0028	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.663836	NA	NA	NA	NA	NA	0.007	NA	4.3184333
1220	11	89402557	89402557	G	T	intronic	FOLH1B	NA	NA	NA	ncRNA_intronic	ENSG00000134612	NA	NA	NA	Score=243;Name=lod=13	NA	11q14.3	NA	NA	NA	NA	rs11018717	0.19	0.19	0.156	0.219848	0.3748	0.1379	0.2478	0.1293	0.2474	0.29	0.11	0.25	0.09	0.3051	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.551558	NA	NA	0.335427	0.152204	NA	0.232	NA	4.3180063
1220	1	39991475	39991475	G	A	ncRNA_UTR3	BMP8A	NA	NA	NA	ncRNA_UTR3	ENSG00000183682	NA	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	rs2230006	0.09	0.09	NA	0.0916534	0.2117	0.0218	0.072	0.0749	0.0767	0.17	0.01	0.09	0.07	0.137	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.597237	NA	NA	NA	NA	NA	NA	NA	4.3179666
1220	7	158512522	158512522	A	G	intergenic	NCAPG2,ESYT2	dist=15002;dist=11167	NA	NA	ncRNA_exonic	ENSG00000228030	NA	NA	NA	Score=265;Name=lod=16	NA	7q36.3	NA	NA	NA	NA	rs12698276	0.62	0.62	0.617	0.588858	0.6829	0.5308	0.5821	0.5635	0.591	0.69	0.57	0.59	0.57	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.317241	2.317241	NA	NA	NA	NA	0.667	NA	4.3171
1220	8	17419299	17419299	A	G	intronic	SLC7A2	NA	NA	NA	intronic	ENSG00000003989	NA	NA	NA	NA	NA	8p22	NA	Name=Pol2	NA	NA	rs2705062	0.64	0.64	0.641	0.609425	0.6829	0.6706	0.5749	0.6195	0.4816	0.68	0.67	0.58	0.58	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.224641	NA	NA	NA	NA	NA	0.63	NA	4.3171
1220	12	6839453	6839453	G	A	intronic	COPS7A	NA	NA	NA	intronic	ENSG00000111652	NA	NA	NA	NA	NA	12p13.31	NA	Name=CTCF	NA	NA	rs871365	0.67	0.67	0.659	0.703075	0.6829	0.749	0.6167	0.6127	0.8599	0.67	0.75	0.65	0.58	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.072081	NA	NA	NA	NA	NA	0.536	NA	4.3171
1220	6	28121860	28121860	C	T	UTR3	ZKSCAN8	NM_006298:c.*65C>T	NA	NA	UTR3	ENSG00000198315	ENST00000606198:c.*1339C>T,ENST00000330236:c.*65C>T	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs72846784	0.01	0.01	0.006	0.0061901	0.0179	NA	0.0115	NA	0.0051	0.02	NA	0.02	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.231099	NA	NA	NA	NA	NA	0.058	NA	4.3154334
1220	19	55014018	55014018	A	G	UTR5	LAIR2	NM_002288:c.-117A>G,NM_021270:c.-117A>G	NA	NA	UTR5	ENSG00000167618	ENST00000301202:c.-117A>G	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs2287829	0.03	0.03	0.019	0.0279553	0.0179	0.0466	0.0504	0.0023	0.0378	0.02	0.04	0.05	NA	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.855574	NA	NA	NA	NA	NA	0.007	NA	4.3154334
1220	1	157566211	157566211	A	G	intronic	FCRL4	NA	NA	NA	intronic	ENSG00000163518	NA	NA	NA	NA	NA	1q23.1	NA	Name=NFKB	NA	NA	rs12744410	0.3	0.3	0.278	0.291534	0.3539	0.2202	0.3127	0.2852	0.2945	0.34	0.2	0.35	0.3	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.120587	NA	NA	0.330924	0.310694	NA	0.29	NA	4.315176
1220	1	160854445	160854445	T	C	intronic	ITLN1	NA	NA	NA	intronic	ENSG00000179914	NA	NA	NA	NA	NA	1q23.3	NA	Name=ELF1_(SC-631),CTCF	NA	NA	rs2039415	0.68	0.68	0.668	0.667931	0.6849	0.7371	0.7262	0.5431	0.7065	0.68	0.75	0.71	0.58	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.164597	NA	NA	NA	NA	NA	0.667	NA	4.3151
1221	2	132349648	132349648	T	G	ncRNA_intronic	RNU6-81P	NA	NA	NA	ncRNA_exonic	ENSG00000204434	NA	NA	NA	NA	NA	2q21.1	NA	NA	NA	NA	rs13029900	0.24	0.24	0.216	0.217252	0.3519	0.1548	0.2061	0.1324	0.2658	0.35	0.18	0.26	0.12	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.569048	NA	NA	NA	NA	NA	0.116	NA	4.3147666
1221	19	326481	326481	G	A	intronic	MIER2	NA	NA	NA	intronic	ENSG00000105556	NA	NA	NA	Score=259;Name=lod=15	NA	19p13.3	NA	NA	NA	NA	rs4897949	0.25	0.25	0.228	0.285144	0.2048	0.4454	0.2767	0.1271	0.4223	0.2	0.41	0.25	0.14	0.2555	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.669779	NA	NA	0.225116	0.133227	NA	0.254	NA	4.314584
1221	15	90128910	90128910	T	C	intronic	TICRR	NA	NA	NA	ncRNA_intronic	ENSG00000259713	NA	NA	NA	NA	NA	15q26.1	Score=876;Name=V$FOXJ2_02	NA	NA	NA	rs893723	0.26	0.26	0.254	0.272364	0.332	0.3948	0.2853	0.0567	0.3671	0.34	0.35	0.24	0.07	0.353	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.044925	NA	NA	0.333861	0.085314	NA	0.261	NA	4.3144723
1221	19	45152923	45152923	C	G	intronic	PVR	NA	NA	NA	ncRNA_intronic	ENSG00000266903	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs113526265	0.05	0.05	0.045	0.0557109	0.0189	NA	0.0245	0.1581	0.0348	0.02	NA	0.03	0.15	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.391408	NA	NA	NA	NA	NA	0.058	NA	4.3144333
1221	3	37535984	37535984	C	G	intronic	ITGA9	NA	NA	NA	intronic	ENSG00000144668	NA	NA	NA	Score=564;Name=lod=261	NA	3p22.2	NA	NA	Name=12	NA	rs2507940	0.59	0.59	0.547	0.532748	0.5358	0.7917	0.6758	0.3722	0.3783	0.53	0.81	0.7	0.35	0.5725	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.552787	2.552787	NA	0.577442	0.409215	NA	0.551	NA	4.314258
1221	3	88999950	88999950	T	G	intergenic	C3orf38,EPHA3	dist=792835;dist=156724	NA	NA	ncRNA_exonic	ENSG00000242705	NA	NA	NA	NA	NA	3p11.1	NA	NA	Name=3	NA	rs7640057	0.66	0.66	0.638	0.65016	0.6859	0.6349	0.5072	0.7307	0.6217	0.68	0.63	0.57	0.72	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.532894	NA	NA	NA	NA	NA	0.797	NA	4.3141
1221	5	68150939	68150939	A	G	intergenic	PIK3R1,SLC30A5	dist=553290;dist=238837	NA	NA	ncRNA_intronic	ENSG00000249335	NA	NA	NA	Score=582;Name=lod=309	NA	5q13.1	NA	NA	NA	NA	rs10471758	0.55	0.55	0.515	0.522165	0.6859	0.5407	0.6527	0.2481	0.6125	0.68	0.59	0.63	0.23	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.810553	NA	NA	NA	NA	NA	0.529	NA	4.3141
1221	14	20841162	20841162	C	T	intronic	TEP1	NA	NA	NA	intronic	ENSG00000129566	NA	NA	NA	NA	NA	14q11.2	NA	NA	Name=2	NA	rs1760909	0.31	0.31	0.328	0.320288	0.2227	0.3046	0.3674	0.447	0.2321	0.23	0.29	0.32	0.45	0.2573	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.922167	NA	NA	0.206047	0.389469	NA	0.225	NA	4.313953
1221	5	77081834	77081834	C	T	intergenic	TBCA,AP3B1	dist=9649;dist=216316	NA	NA	intronic	ENSG00000171530	NA	NA	NA	Score=867;Name=lod=4445	NA	5q14.1	NA	NA	NA	NA	rs151700	0.17	0.17	0.137	0.156949	0.3529	0.0437	0.2363	0.0356	0.18	0.35	0.04	0.22	0.04	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.850971	1.850971	NA	NA	NA	NA	0.138	NA	4.3137667
1221	16	78133671	78133671	C	T	UTR5	WWOX	NM_130791:c.-5C>T,NM_016373:c.-5C>T,NM_130844:c.-5C>T	NA	NA	UTR5	ENSG00000186153	ENST00000566780:c.-5C>T,ENST00000569332:c.-5C>T,ENST00000539474:c.-5C>T,ENST00000406884:c.-5C>T,ENST00000402655:c.-5C>T,ENST00000566662:c.-5C>T,ENST00000569818:c.-5C>T,ENST00000355860:c.-5C>T,ENST00000408984:c.-5C>T	NA	NA	NA	NA	16q23.1	NA	Name=CHD2_(N-1250),ETS1,GATA-1,TAF1,ZBTB33,HMGN3,Pol2,ZEB1_(SC-25388),HEY1,Nrf1,Pol2-4H8	NA	NA	rs11545028	0.24	0.24	0.207	0.215655	0.3181	0.2044	0.2435	0.118	0.2342	0.33	0.21	0.28	0.12	0.372	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.885415	1.885415	NA	0.329508	0.171642	NA	0.167	NA	4.3137254
1221	12	58090051	58090051	T	C	intronic	OS9	NA	NA	NA	ncRNA_intronic	ENSG00000257342	NA	NA	NA	NA	NA	12q13.3	NA	NA	NA	NA	rs114532828	0.01	0.01	0.006	0.0163738	0.004	0.006	0.0058	0.0469	0.0061	0.01	0.01	0.01	0.03	0.0095	0.045	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.637819	1.637819	NA	0.006279	0.044712	NA	0.007	NA	4.3135543
1221	2	234449316	234449316	G	A	exonic	USP40	NA	synonymous SNV	USP40:NM_018218:exon9:c.C1195T:p.L399L	exonic	ENSG00000085982	NA	synonymous SNV	ENSG00000085982:ENST00000427112:exon9:c.C1159T:p.L387L,ENSG00000085982:ENST00000450966:exon9:c.C1195T:p.L399L,ENSG00000085982:ENST00000251722:exon10:c.C1159T:p.L387L	Score=520;Name=lod=173	NA	2q37.1	NA	NA	NA	NA	rs2167884	0.81	0.81	0.812	0.819888	0.7565	0.8542	0.866	0.7716	0.8824	0.77	0.88	0.87	0.75	0.8091	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.982927	NA	NA	0.787728	0.782353	NA	0.841	NA	4.3133386
1221	16	12162969	12162969	A	G	exonic	SNX29	NA	synonymous SNV	SNX29:NM_032167:exon10:c.A1299G:p.P433P	exonic	ENSG00000048471	NA	synonymous SNV	ENSG00000048471:ENST00000306030:exon3:c.A144G:p.P48P,ENSG00000048471:ENST00000323433:exon3:c.A144G:p.P48P,ENSG00000048471:ENST00000566228:exon10:c.A1299G:p.P433P	NA	NA	16p13.13	NA	NA	NA	NA	rs1641843	0.56	0.56	0.565	0.609026	0.4632	0.5258	0.5014	0.8116	0.6472	0.44	0.57	0.49	0.8	0.4809	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.531869	NA	NA	0.409268	0.740235	ID=COSM148024;OCCURENCE=1(stomach)	0.543	NA	4.3132986
1221	5	94206202	94206202	C	T	intronic	MCTP1	NA	NA	NA	intronic	ENSG00000175471	NA	NA	NA	Score=668;Name=lod=693	NA	5q15	NA	NA	NA	NA	rs159032	0.15	0.15	0.14	0.142173	0.2515	0.1161	0.2075	0.0212	0.1738	0.23	0.13	0.22	0.01	0.199	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.369263	NA	NA	0.236218	0.05495	ID=COSM149888;OCCURENCE=1(stomach)	0.109	NA	4.313282
1221	3	75591279	75591279	C	T	intergenic	FAM86DP,MIR1324	dist=107013;dist=88635	NA	NA	downstream	ENSG00000244674	NA	NA	NA	Score=793;Name=lod=2224	NA	3p12.3	NA	NA	NA	NA	rs62260259	0.1	0.1	0.066	0.122005	0.1869	0.0367	0.196	0.0651	0.1677	0.16	0.03	0.15	0.07	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.771799	NA	NA	NA	NA	NA	NA	NA	4.3131
1221	4	74349867	74349867	A	G	intronic	AFM	NA	NA	NA	intronic	ENSG00000079557	NA	NA	NA	NA	NA	4q13.3	NA	Name=SRF	NA	NA	rs11939341	0.59	0.59	0.568	0.554513	0.6869	0.6369	0.4928	0.3926	0.5961	0.69	0.63	0.55	0.42	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.307947	NA	NA	NA	NA	NA	0.493	NA	4.3131
1221	10	43232450	43232450	G	A	intergenic	ZNF33B,BMS1	dist=98458;dist=45504	NA	NA	ncRNA_intronic	ENSG00000230425	NA	NA	NA	Score=620;Name=lod=442	NA	10q11.21	NA	NA	NA	NA	rs702370	0.6	0.6	0.606	0.595647	0.6869	0.5198	0.634	0.562	0.5982	0.66	0.54	0.64	0.54	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.834945	NA	NA	NA	NA	NA	0.725	NA	4.3131
1221	7	129125721	129125721	T	C	UTR3	STRIP2	NM_020704:c.*51T>C	NA	NA	UTR3	ENSG00000128578	ENST00000249344:c.*51T>C	NA	NA	NA	NA	7q32.1	NA	NA	NA	NA	rs150728758	0.0041	0.0041	0.005	0.00359425	0.007	NA	0.0058	NA	0.0072	0.01	NA	0.01	NA	0.0059	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5.117857	5.117857	NA	0.007676	0.000454	NA	NA	NA	4.3127574
1221	17	78444658	78444658	T	G	exonic	NPTX1	NA	synonymous SNV	NPTX1:NM_002522:exon5:c.A1254C:p.G418G	exonic	ENSG00000171246	NA	synonymous SNV	ENSG00000171246:ENST00000306773:exon5:c.A1254C:p.G418G	NA	NA	17q25.3	Score=726;Name=V$SEF1_C	NA	NA	NA	rs12943620	0.83	0.83	0.821	0.837061	0.7694	0.7629	0.83	0.9758	0.8006	0.78	0.78	0.83	0.96	0.8028	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.990575	NA	NA	0.78186	0.94167	ID=COSM1130122;OCCURENCE=1(prostate)	0.855	NA	4.3126066
1221	12	113388439	113388439	G	A	intronic	OAS3	NA	NA	NA	ncRNA_intronic	ENSG00000257452	NA	NA	NA	NA	NA	12q24.13	NA	NA	NA	NA	rs140201795	0.01	0.01	0.008	0.0107827	0.0209	0.001	0.0058	0.0008	0.0276	0.02	0.0017	0.01	0.002	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.582123	NA	NA	NA	NA	NA	NA	NA	4.3124333
1221	11	27401743	27401743	A	T	intronic	LGR4	NA	NA	NA	intronic	ENSG00000205213	NA	NA	NA	NA	NA	11p14.1	NA	Name=PU.1	NA	NA	rs2472623	0.58	0.58	0.573	0.569089	0.6879	0.499	0.5086	0.559	0.5757	0.68	0.47	0.51	0.61	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.290445	NA	NA	NA	NA	NA	0.645	NA	4.3121
1221	17	1985050	1985050	T	C	intronic	SMG6	NA	NA	NA	intronic	ENSG00000070366	NA	NA	NA	NA	NA	17p13.3	NA	NA	Name=62	NA	rs8076897	0.78	0.78	0.766	0.765974	0.6879	0.9296	0.8415	0.7262	0.6779	0.68	0.92	0.82	0.73	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.001989	NA	NA	NA	NA	NA	0.761	NA	4.3121
1221	1	91980447	91980447	A	G	exonic	CDC7	NA	synonymous SNV	CDC7:NM_001134419:exon9:c.A990G:p.T330T,CDC7:NM_001134420:exon9:c.A990G:p.T330T,CDC7:NM_003503:exon9:c.A990G:p.T330T	exonic	ENSG00000097046	NA	synonymous SNV	ENSG00000097046:ENST00000430031:exon8:c.A906G:p.T302T,ENSG00000097046:ENST00000234626:exon9:c.A990G:p.T330T,ENSG00000097046:ENST00000428239:exon9:c.A990G:p.T330T	Score=366;Name=lod=41	NA	1p22.2	NA	NA	NA	NA	rs483532	0.78	0.78	0.782	0.76897	0.7942	0.7579	0.7824	0.7837	0.7249	0.79	0.77	0.8	0.77	0.7773	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.941881	NA	NA	0.78314	0.771448	NA	0.87	NA	4.3120266
1221	5	176940384	176940384	G	A	exonic	DDX41	NA	synonymous SNV	DDX41:NM_016222:exon11:c.C1200T:p.R400R	exonic	ENSG00000183258	NA	synonymous SNV	ENSG00000183258:ENST00000330503:exon10:c.C1254T:p.R418R,ENSG00000183258:ENST00000507955:exon11:c.C1200T:p.R400R	NA	NA	5q35.3	NA	NA	NA	NA	rs335438	0.37	0.37	0.405	0.386382	0.4712	0.2063	0.3199	0.4539	0.4407	0.48	0.17	0.35	0.47	0.4198	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.596568	NA	NA	0.463837	0.455061	NA	0.5	NA	4.3118296
1221	2	130893997	130893997	A	G	ncRNA_intronic	CCDC74B-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000223760	NA	NA	NA	NA	NA	2q21.1	NA	NA	NA	NA	rs4474835	0.4	0.4	0.345	0.398363	0.3549	0.4435	0.4452	0.3449	0.4356	0.36	0.47	0.41	0.36	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.553013	NA	NA	NA	NA	NA	0.514	NA	4.3117666
1221	8	125711882	125711882	C	T	intronic	MTSS1	NA	NA	NA	intronic	ENSG00000170873	NA	NA	NA	NA	NA	8q24.13	NA	NA	Name=51	NA	rs72714775	0.2	0.2	0.174	0.209665	0.2197	0.1845	0.2781	0.149	0.2587	0.22	0.19	0.23	0.16	0.2398	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.53979	NA	NA	0.228837	0.15842	NA	0.203	NA	4.311663
1221	10	73992939	73992939	C	T	UTR3	ANAPC16	NM_001242548:c.*65C>T,NM_001242547:c.*65C>T,NM_001242546:c.*65C>T,NM_173473:c.*65C>T	NA	NA	UTR3	ENSG00000166295	ENST00000299381:c.*65C>T	NA	NA	NA	NA	10q22.1	NA	NA	NA	NA	rs117571297	0.01	0.01	0.009	0.00758786	0.0219	NA	0.0086	0.0008	0.0092	0.02	NA	0.01	NA	NA	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.712866	NA	NA	NA	NA	NA	0.022	NA	4.3114334
1221	1	39720180	39720180	C	A	intronic	MACF1	NA	NA	NA	ncRNA_intronic	ENSG00000226438	NA	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	rs75830873	0.05	0.05	0.044	0.0455272	0.0219	0.1468	0.0202	0.0045	0.0389	0.02	0.13	0.02	0.01	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.912124	2.912124	NA	NA	NA	NA	0.014	NA	4.3114333
1221	20	55913500	55913500	C	T	ncRNA_intronic	MIR5095	NA	NA	NA	intronic	ENSG00000054796	NA	NA	NA	NA	NA	20q13.31	NA	NA	NA	NA	rs75714022	0.03	0.03	0.023	0.0327476	0.0219	0.001	0.0144	0.0847	0.0194	0.02	NA	0.02	0.08	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.038324	NA	NA	NA	NA	NA	0.087	NA	4.3114333
1221	11	118886656	118886656	G	A	intronic	RPS25	NA	NA	NA	intronic	ENSG00000118181	NA	NA	NA	NA	NA	11q23.3	NA	Name=Pol2-4H8	NA	NA	rs7131534	0.23	0.23	0.24	0.282548	0.2296	0.0704	0.2406	0.4622	0.3425	0.22	0.05	0.25	0.45	0.2334	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.164465	NA	NA	0.22596	0.425682	NA	0.326	NA	4.31104
1221	6	31323020	31323020	T	C	intronic	HLA-B	NA	NA	NA	intronic	ENSG00000234745	NA	NA	NA	NA	NA	6p21.33	NA	Name=Pol2,Pol2-4H8	NA	NA	rs2276448	0.29	0.29	0.258	0.315495	0.2366	0.2649	0.2939	0.4017	0.3476	0.23	0.3	0.31	0.36	0.259	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.43511	1.43511	NA	0.193429	0.31767	NA	0.246	NA	4.310971
1221	3	136739340	136739340	T	A	intergenic	IL20RB,SOX14	dist=9414;dist=743794	NA	NA	intergenic	ENSG00000174564,ENSG00000201325	dist=9413;dist=497636	NA	NA	NA	NA	3q22.3	NA	NA	Name=12	NA	rs141428508	0.01	0.01	0.005	0.0127796	0.0229	NA	0.0274	0.0023	0.0194	0.02	NA	0.03	0.01	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.442893	NA	NA	NA	NA	NA	0.014	NA	4.3104334
1221	19	12090847	12090847	A	T	UTR3	ZNF763	NM_001012753:c.*923A>T	NA	NA	UTR3	ENSG00000197054	ENST00000343949:c.*923A>T	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs72988679	0.02	0.02	0.017	0.019369	0.0229	0.006	0.0144	0.0257	0.0245	0.02	0.01	0.02	0.03	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.608552	NA	NA	NA	NA	NA	0.014	NA	4.3104334
1221	19	12059023	12059023	A	G	intronic	ZNF700	NA	NA	NA	ncRNA_intronic	ENSG00000267274	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs116990100	0.01	0.01	0.009	0.0135783	0.0229	0.0069	0.0144	0.003	0.0245	0.02	0.01	0.02	0.01	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.623976	NA	NA	NA	NA	NA	0.007	NA	4.3104333
1221	6	29695713	29695713	C	T	ncRNA_intronic	HLA-F-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000214922	NA	NA	NA	NA	NA	6p22.1	NA	Name=Pol2-4H8	NA	NA	rs2523404	0.42	0.42	0.396	0.394569	0.4811	0.4355	0.3963	0.4039	0.2495	0.45	0.37	0.41	0.42	0.4237	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.728076	NA	NA	0.451532	0.377854	NA	0.377	NA	4.3103346
1221	6	31245736	31245736	A	G	intergenic	HLA-C,HLA-B	dist=5823;dist=75913	NA	NA	ncRNA_exonic	ENSG00000214892	NA	NA	NA	Score=798;Name=lod=2344	NA	6p21.33	NA	NA	NA	NA	rs6906846	0.68	0.68	0.701	0.678714	0.6899	0.7411	0.6787	0.6256	0.6748	0.69	0.71	0.66	0.66	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.022221	NA	NA	NA	NA	NA	0.71	NA	4.3101
1221	6	29695854	29695854	G	A	ncRNA_intronic	HLA-F-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000214922	NA	NA	NA	NA	NA	6p22.1	NA	Name=Pol2-4H8	NA	NA	rs2735059	0.42	0.42	0.402	0.394569	0.4811	0.4355	0.3963	0.4039	0.2495	0.45	0.37	0.41	0.42	0.424	0.45	0.51	T	0.092	B	0.011	B	.	.	1.000	P	.	.	.	.	-1.021	T	0.027	T	.	0.102	4.55	0.458	0.482	0.251	.	0.102193	NA	0	0.451783	0.377854	NA	0.377	NA	4.3097836
1221	7	105621512	105621512	G	T	exonic	CDHR3	NA	synonymous SNV	CDHR3:NM_152750:exon3:c.G348T:p.L116L	exonic	ENSG00000128536	NA	synonymous SNV	ENSG00000128536:ENST00000478080:exon2:c.G84T:p.L28L,ENSG00000128536:ENST00000488386:exon2:c.G84T:p.L28L,ENSG00000128536:ENST00000317716:exon3:c.G348T:p.L116L,ENSG00000128536:ENST00000496633:exon3:c.G348T:p.L116L,ENSG00000128536:ENST00000541203:exon3:c.G348T:p.L116L,ENSG00000128536:ENST00000542731:exon3:c.G348T:p.L116L	NA	NA	7q22.3	NA	NA	NA	NA	rs193795	0.44	0.44	0.435	0.458067	0.4433	0.4901	0.562	0.2776	0.6104	0.44	0.52	0.52	0.27	0.4749	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.379754	NA	NA	0.438834	0.297291	NA	0.377	NA	4.3096326
1221	7	4308205	4308205	T	A	UTR3	SDK1	NM_152744:c.*3189T>A	NA	NA	UTR3	ENSG00000146555	ENST00000404826:c.*3189T>A	NA	NA	NA	NA	7p22.2	NA	NA	NA	NA	rs10227734	0.13	0.13	0.132	0.166534	0.0239	0.0327	0.0778	0.4183	0.1738	0.02	0.04	0.07	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.929606	NA	NA	NA	NA	NA	0.188	NA	4.3094334
1221	7	4308215	4308215	C	A	UTR3	SDK1	NM_152744:c.*3199C>A	NA	NA	UTR3	ENSG00000146555	ENST00000404826:c.*3199C>A	NA	NA	NA	NA	7p22.2	NA	NA	NA	NA	rs10268227	0.13	0.13	0.128	0.166733	0.0239	0.0327	0.0778	0.4191	0.1738	0.02	0.04	0.07	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.730867	NA	NA	NA	NA	NA	0.188	NA	4.3094334
1221	7	4308220	4308220	T	C	UTR3	SDK1	NM_152744:c.*3204T>C	NA	NA	UTR3	ENSG00000146555	ENST00000404826:c.*3204T>C	NA	NA	NA	NA	7p22.2	NA	NA	NA	NA	rs10227750	0.13	0.13	0.134	0.166733	0.0239	0.0327	0.0778	0.4191	0.1738	0.02	0.04	0.07	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.898601	NA	NA	NA	NA	NA	0.188	NA	4.3094334
1221	1	94344580	94344580	C	A	intronic	DNTTIP2	NA	NA	NA	intronic	ENSG00000067334	NA	NA	NA	NA	NA	1p22.1	NA	Name=CCNT2,ELK4,YY1_(C-20),E2F6,Pol2-4H8,Pol2,NRSF,YY1	NA	NA	rs6675820	0.35	0.35	0.33	0.329673	0.334	0.2123	0.4438	0.438	0.2188	0.32	0.24	0.45	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.409693	1.409693	NA	0.357008	0.397399	NA	0.254	NA	4.308992
1221	1	205568213	205568213	C	T	intronic	MFSD4	NA	NA	NA	intronic	ENSG00000174514	NA	NA	NA	NA	NA	1q32.1	NA	NA	Name=15	NA	rs2282449	0.31	0.31	0.27	0.353235	0.1849	0.6399	0.3919	0.143	0.4877	0.19	0.6	0.34	0.14	0.2864	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.465087	NA	NA	0.219884	0.153654	NA	0.297	NA	4.308816
1221	17	41290613	41290613	G	T	ncRNA_intronic	NBR2	NA	NA	NA	ncRNA_intronic	ENSG00000198496	NA	NA	NA	NA	NA	17q21.31	NA	NA	NA	NA	rs11656097	0.33	0.33	0.297	0.353035	0.3579	0.372	0.3732	0.2171	0.498	0.36	0.33	0.4	0.22	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.517803	NA	NA	NA	NA	NA	0.275	NA	4.3087666
1221	17	41290674	41290674	G	C	ncRNA_exonic	NBR2	NA	NA	NA	ncRNA_exonic	ENSG00000198496	NA	NA	NA	NA	NA	17q21.31	NA	NA	NA	NA	rs2292595	0.33	0.33	0.288	0.352835	0.3579	0.372	0.3732	0.2171	0.4969	0.36	0.33	0.4	0.22	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.23446	NA	NA	NA	NA	NA	0.275	NA	4.3087666
1221	6	132149285	132149285	G	A	intronic	ENPP1	NA	NA	NA	ncRNA_exonic	ENSG00000237115	NA	NA	NA	NA	NA	6q23.2	NA	NA	NA	NA	rs9493108	0.02	0.02	0.015	0.0117812	0.0249	NA	0.0058	0.0189	0.0051	0.03	NA	0.01	0.02	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.760719	NA	NA	NA	NA	NA	NA	NA	4.3084333
1221	15	72901549	72901549	C	A	intergenic	MIR630,GOLGA6B	dist=21895;dist=45489	NA	NA	ncRNA_intronic	ENSG00000259783,ENSG00000260144	NA	NA	NA	Score=505;Name=lod=150	NA	15q24.1	NA	NA	NA	NA	rs112038040	0.43	0.43	0.355	0.41853	0.6918	0.3065	0.5303	0.0484	0.6738	0.7	0.3	0.55	0.06	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.765876	NA	NA	NA	NA	NA	0.391	NA	4.3082
1221	19	55119229	55119229	T	G	intergenic	LILRA1,LILRB1	dist=5542;dist=9400	NA	NA	intronic	ENSG00000104972	NA	NA	NA	NA	NA	19q13.42	NA	Name=PAX5-C20	NA	NA	rs11669028	0.51	0.51	0.479	0.507987	0.3588	0.5982	0.5331	0.6331	0.3814	0.36	0.59	0.52	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.72897	NA	NA	NA	NA	NA	0.594	NA	4.3078667
1221	2	234753008	234753008	G	A	intronic	HJURP	NA	NA	NA	intronic	ENSG00000123485	NA	NA	NA	NA	NA	2q37.1	NA	Name=Pol2	NA	NA	rs169925	0.74	0.74	0.758	0.682308	0.6928	0.7163	0.7089	0.7874	0.4755	0.71	0.76	0.7	0.78	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.87874	NA	NA	NA	NA	NA	0.877	NA	4.3072
1221	16	58051178	58051178	C	T	intronic	USB1	NA	NA	NA	intronic	ENSG00000103005	NA	NA	NA	NA	NA	16q21	NA	NA	Name=15	NA	rs4784022	0.5	0.5	0.492	0.498003	0.6928	0.498	0.4294	0.2239	0.7168	0.7	0.49	0.5	0.21	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.865907	NA	NA	NA	NA	NA	0.551	NA	4.3072
1221	17	69617619	69617619	C	A	intergenic	KCNJ2,SOX9	dist=1441436;dist=499542	NA	NA	downstream	ENSG00000228118	NA	NA	NA	Score=289;Name=lod=20	NA	17q24.3	NA	NA	NA	NA	rs12950256	0.12	0.12	0.114	0.10643	0.1928	0.0337	0.1023	0.0946	0.1115	0.2	0.04	0.1	0.1	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.615699	NA	NA	NA	NA	NA	0.188	NA	4.3072
1221	4	74451092	74451092	T	G	intronic	RASSF6	NA	NA	NA	intronic	ENSG00000169435	NA	NA	NA	Score=441;Name=lod=83	NA	4q13.3	NA	NA	NA	NA	rs12508661	0.16	0.16	0.132	0.141374	0.2525	0.0754	0.353	0.0129	0.1186	0.25	0.08	0.31	0.01	0.199	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.314302	NA	NA	0.241335	0.051067	NA	0.21	NA	4.307165
1221	7	92760502	92760502	G	A	UTR3	SAMD9L	NM_152703:c.*28C>T	NA	NA	UTR3	ENSG00000177409	ENST00000318238:c.*28C>T,ENST00000411955:c.*28C>T,ENST00000437805:c.*28C>T	NA	NA	NA	NA	7q21.2	Score=884;Name=V$FOXD3_01	NA	NA	NA	rs4268	0.56	0.56	0.591	0.568091	0.3072	0.5982	0.5072	0.9327	0.3558	0.3	0.61	0.51	0.93	0.4099	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.473309	NA	NA	0.309214	0.822207	NA	0.565	NA	4.3070194
1221	2	89987087	89987087	T	A	intergenic	MIR4436A,LOC654342	dist=875119;dist=1837622	NA	NA	downstream	ENSG00000243264	NA	NA	NA	Score=346;Name=lod=34	NA	2p11.2	NA	NA	NA	NA	rs111330053	0.04	0.04	0.037	0.0379393	0.0696	0.0089	0.0476	0.0061	0.0716	0.08	0.01	0.02	0.02	0.0565	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.998997	NA	NA	0.067048	0.019343	NA	0.014	NA	4.306852
1221	15	40494952	40494952	A	T	intronic	BUB1B	NA	NA	NA	intronic	ENSG00000156970	NA	NA	NA	NA	NA	15q15.1	NA	NA	Name=7	NA	rs2412482	0.62	0.62	0.643	0.628594	0.6938	0.3472	0.6052	0.8593	0.5562	0.7	0.35	0.61	0.83	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.591219	NA	NA	NA	NA	NA	0.71	NA	4.3062
1221	4	20482461	20482461	C	G	intronic	SLIT2	NA	NA	NA	intronic	ENSG00000145147	NA	NA	NA	NA	NA	4p15.31	NA	NA	Name=4	NA	rs16869654	0.16	0.16	0.165	0.153155	0.2515	0.0933	0.2248	0.0658	0.181	0.24	0.11	0.19	0.09	0.2021	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.329419	NA	NA	0.240814	0.088062	NA	0.239	NA	4.305586
1221	3	194362620	194362620	T	G	UTR3	LSG1	NM_018385:c.*177A>C	NA	NA	ncRNA_UTR3	ENSG00000041802	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs711994	0.18	0.18	0.167	0.134984	0.1948	0.1954	0.1398	0.0703	0.0951	0.21	0.2	0.17	0.1	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.695814	NA	NA	NA	NA	NA	0.123	NA	4.3052
1221	12	49110248	49110248	G	A	intronic	CCNT1	NA	NA	NA	intronic	ENSG00000129315	NA	NA	NA	NA	NA	12q13.12	Score=766;Name=V$PAX5_02	Name=CTCF,E2F6_(H-50),Pol2,YY1_(C-20),Pol2(b),Ini1,ZNF263	NA	NA	rs1110432	0.56	0.56	0.519	0.557308	0.5408	0.7847	0.5548	0.3154	0.6687	0.56	0.75	0.56	0.33	0.5886	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.174922	2.174922	NA	0.565581	0.320845	NA	0.486	NA	4.305019
1222	2	89309735	89309735	A	G	intergenic	MIR4436A,NONE	dist=197767;dist=NONE	NA	NA	exonic	ENSG00000241755	NA	nonsynonymous SNV	ENSG00000241755:ENST00000493819:exon2:c.T95C:p.F32S	NA	NA	2p11.2	NA	NA	NA	NA	rs80322626	0.2	0.2	NA	0.26897	0.165	0.4107	0.2781	0.1914	0.3282	0.12	0.35	0.2	0.13	0.2222	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.223476	NA	1	0.14127	0.136867	ID=COSN166177;OCCURENCE=1(breast)	0.051	NA	4.3048634
1222	7	129663292	129663292	T	C	intronic	ZC3HC1	NA	NA	NA	ncRNA_intronic	ENSG00000244036	NA	NA	NA	NA	NA	7q32.2	NA	NA	NA	NA	rs117585966	0.01	0.01	0.009	0.0123802	0.0288	0.0079	0.0187	0.0023	0.0092	0.02	0.0017	0.03	0.002	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.066708	NA	NA	NA	NA	NA	0.014	NA	4.3045333
1222	14	21189672	21189672	T	C	intergenic	RNASE4,EDDM3A	dist=20914;dist=24427	NA	NA	ncRNA_exonic	ENSG00000259144	NA	NA	NA	Score=782;Name=lod=2015	NA	14q11.2	NA	NA	NA	NA	rs4982347	0.6	0.6	0.579	0.615615	0.6958	0.3562	0.7075	0.6679	0.6646	0.68	0.35	0.72	0.66	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.064752	NA	NA	NA	NA	NA	0.638	NA	4.3042
1222	16	15178688	15178688	C	A	intronic	RRN3	NA	NA	NA	intronic	ENSG00000085721,ENSG00000179889	NA	NA	NA	NA	NA	16p13.11	NA	Name=BATF	NA	NA	rs8061051	0.53	0.53	0.49	0.515775	0.6958	0.4355	0.7435	0.2035	0.6738	0.7	0.46	0.74	0.22	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.002658	NA	NA	NA	NA	NA	0.486	NA	4.3042
1222	7	105205955	105205955	T	C	ncRNA_intronic	EFCAB10	NA	NA	NA	UTR3	ENSG00000185055	ENST00000485614:c.*41A>G	NA	NA	NA	NA	7q22.3	NA	NA	NA	NA	rs861761	0.1	0.1	0.106	0.123802	0.0567	0.0823	0.0994	0.2489	0.0838	0.06	0.08	0.1	0.22	0.0807	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.246832	NA	NA	0.058605	0.208125	NA	0.109	NA	4.303995
1222	7	105205917	105205917	A	C	ncRNA_intronic	EFCAB10	NA	NA	NA	UTR3	ENSG00000185055	ENST00000485614:c.*79T>G	NA	NA	NA	NA	7q22.3	NA	NA	NA	NA	rs864687	0.11	0.11	0.099	0.124401	0.0567	0.0823	0.0994	0.2511	0.0838	0.06	0.08	0.1	0.22	0.0809	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.908801	NA	NA	0.058605	0.211984	NA	0.109	NA	4.303795
1222	4	9982330	9982330	A	G	exonic	SLC2A9	NA	synonymous SNV	SLC2A9:NM_020041:exon5:c.T567C:p.L189L,SLC2A9:NM_001001290:exon6:c.T480C:p.L160L	exonic	ENSG00000109667	NA	synonymous SNV	ENSG00000109667:ENST00000264784:exon5:c.T567C:p.L189L,ENSG00000109667:ENST00000309065:exon6:c.T480C:p.L160L,ENSG00000109667:ENST00000513129:exon6:c.T480C:p.L160L,ENSG00000109667:ENST00000506583:exon7:c.T480C:p.L160L	Score=456;Name=lod=95	NA	4p16.1	NA	NA	NA	NA	rs13125646	0.78	0.78	0.769	0.752396	0.8012	0.9861	0.6254	0.5628	0.8078	0.8	0.98	0.67	0.59	0.7717	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0217	NA	NA	0.79	0.610531	NA	0.812	NA	4.3037666
1222	11	44626480	44626480	C	A	intronic	CD82	NA	NA	NA	ncRNA_intronic	ENSG00000254693	NA	NA	NA	NA	NA	11p11.2	NA	NA	NA	NA	rs116871136	0.02	0.02	0.014	0.0119808	0.0298	NA	0.0303	0.0023	0.0061	0.03	NA	0.04	0.002	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.937768	NA	NA	NA	NA	NA	0.007	NA	4.3035333
1222	11	62186542	62186542	G	A	UTR5	SCGB1A1	NM_003357:c.-26G>A	NA	NA	UTR5	ENSG00000149021	ENST00000278282:c.-26G>A	NA	NA	NA	Name=Chronic obstructive pulmonary disease-related biomarkers	11q12.3	NA	NA	NA	NA	rs3741240	0.33	0.33	0.336	0.33147	0.3429	0.3571	0.2435	0.2201	0.5061	0.34	0.4	0.28	0.24	0.3451	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.909869	NA	NA	0.341824	0.254314	NA	0.181	NA	4.3035094
1222	3	195956827	195956827	T	C	exonic	SLC51A	NA	synonymous SNV	SLC51A:NM_152672:exon7:c.T675C:p.L225L	exonic	ENSG00000163959	NA	synonymous SNV	ENSG00000163959:ENST00000296327:exon7:c.T675C:p.L225L	NA	NA	3q29	NA	NA	NA	NA	rs17852687	0.52	0.52	0.507	0.497604	0.4394	0.7897	0.4914	0.3222	0.498	0.43	0.8	0.49	0.35	0.4801	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.065848	NA	NA	0.443953	0.346573	NA	0.464	NA	4.3032136
1222	6	29771339	29771339	C	T	intergenic	LOC554223,HLA-G	dist=5755;dist=23417	NA	NA	ncRNA_exonic	ENSG00000213880	NA	NA	NA	Score=789;Name=lod=2148	NA	6p22.1	NA	NA	NA	NA	rs1632992	0.69	0.69	0.702	0.688299	0.6968	0.5595	0.7176	0.8714	0.544	0.68	0.56	0.69	0.87	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.059615	NA	NA	NA	NA	NA	0.659	NA	4.3032
1222	9	123483559	123483559	G	A	intergenic	MEGF9,FBXW2	dist=6794;dist=35695	NA	NA	ncRNA_exonic	ENSG00000238181	NA	NA	NA	Score=827;Name=lod=3057	NA	9q33.2	NA	NA	NA	NA	rs4837792	0.55	0.55	0.517	0.566294	0.6968	0.5794	0.7349	0.2413	0.7382	0.7	0.55	0.71	0.22	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.336789	NA	NA	NA	NA	NA	0.551	NA	4.3032
1222	9	123484115	123484115	A	G	intergenic	MEGF9,FBXW2	dist=7350;dist=35139	NA	NA	ncRNA_exonic	ENSG00000238181	NA	NA	NA	Score=827;Name=lod=3057	NA	9q33.2	NA	NA	NA	NA	rs10985000	0.55	0.55	0.507	0.564696	0.6968	0.5784	0.7334	0.2368	0.7382	0.7	0.55	0.71	0.22	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.331194	2.331194	NA	NA	NA	NA	0.558	NA	4.3032
1222	9	123484232	123484232	G	A	intergenic	MEGF9,FBXW2	dist=7467;dist=35022	NA	NA	ncRNA_exonic	ENSG00000238181	NA	NA	NA	Score=487;Name=lod=127	NA	9q33.2	NA	NA	NA	NA	rs10985001	0.55	0.55	0.507	0.563498	0.6968	0.5764	0.7334	0.2337	0.7382	0.7	0.55	0.71	0.21	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.368794	NA	NA	NA	NA	NA	0.543	NA	4.3032
1222	12	90147264	90147264	C	A	intergenic	LOC338758,LINC00615	dist=41535;dist=1164536	NA	NA	ncRNA_exonic	ENSG00000257480	NA	NA	NA	Score=473;Name=lod=112	NA	12q21.33	NA	NA	NA	NA	rs882968	0.69	0.69	0.71	0.700679	0.6968	0.8413	0.5908	0.562	0.8252	0.69	0.8	0.61	0.62	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.150718	NA	NA	NA	NA	NA	0.674	NA	4.3032
1222	12	90147434	90147434	T	C	intergenic	LOC338758,LINC00615	dist=41705;dist=1164366	NA	NA	ncRNA_exonic	ENSG00000257480	NA	NA	NA	Score=635;Name=lod=508	NA	12q21.33	NA	NA	NA	NA	rs10858925	0.69	0.69	0.693	0.700679	0.6968	0.8413	0.5908	0.562	0.8252	0.69	0.8	0.61	0.6	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.245399	NA	NA	NA	NA	NA	0.674	NA	4.3032
1222	20	44374806	44374806	G	C	intergenic	SPINT4,WFDC3	dist=20471;dist=28041	NA	NA	ncRNA_exonic	ENSG00000226188	NA	NA	NA	Score=479;Name=lod=118	NA	20q13.12	NA	NA	NA	NA	rs426384	0.69	0.69	0.689	0.669329	0.6968	0.6518	0.7954	0.6997	0.5286	0.72	0.62	0.76	0.65	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.103494	NA	NA	NA	NA	NA	0.797	NA	4.3032
1222	9	99064396	99064396	C	G	UTR5	HSD17B3	NM_000197:c.-10G>C	NA	NA	UTR5	ENSG00000130948	ENST00000375263:c.-10G>C	NA	NA	NA	NA	9q22.32	NA	NA	NA	NA	rs2066484	0.02	0.02	0.021	0.0273562	0.004	0.0526	0.0029	0.0076	0.0695	0.01	0.05	0.01	0.01	0.0194	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0649	NA	NA	0.006744	0.010213	NA	0.022	NA	4.3031894
1222	1	97700589	97700589	C	T	ncRNA_intronic	DPYD-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000232878	NA	NA	NA	NA	NA	1p21.3	NA	NA	NA	NA	rs12137711	0.08	0.08	0.062	0.0880591	0.1282	0.0407	0.0735	0.0106	0.2106	0.14	0.04	0.09	0.02	0.1176	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.658606	NA	NA	0.118023	0.027916	NA	0.036	NA	4.3028436
1222	14	21190253	21190253	C	T	intergenic	RNASE4,EDDM3A	dist=21495;dist=23846	NA	NA	ncRNA_exonic	ENSG00000259144	NA	NA	NA	Score=782;Name=lod=2015	NA	14q11.2	NA	NA	NA	NA	rs2012351	0.55	0.55	0.575	0.629393	0.6978	0.3819	0.7061	0.6967	0.6687	0.61	0.34	0.68	0.59	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.565967	NA	NA	NA	NA	NA	0.638	NA	4.3022
1222	10	135000148	135000148	T	C	exonic	KNDC1	NA	synonymous SNV	KNDC1:NM_152643:exon6:c.T1296C:p.A432A	exonic	ENSG00000171798	NA	synonymous SNV	ENSG00000171798:ENST00000368571:exon5:c.T1101C:p.A367A,ENSG00000171798:ENST00000304613:exon6:c.T1296C:p.A432A,ENSG00000171798:ENST00000368572:exon6:c.T1296C:p.A432A	NA	NA	10q26.3	NA	NA	NA	NA	rs3810965	0.4	0.4	0.362	0.416733	0.4354	0.5764	0.3847	0.118	0.6595	0.46	0.59	0.37	0.11	0.4688	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.377968	NA	NA	0.460428	0.163335	NA	0.37	NA	4.3020386
1222	6	42666293	42666293	G	A	intronic	PRPH2	NA	NA	NA	intronic	ENSG00000112619	NA	NA	NA	NA	NA	6p21.1	NA	Name=CTCF_(SC-5916),CTCF	NA	NA	rs41273820	0.19	0.19	0.223	0.212061	0.2505	0.0942	0.1988	0.2443	0.2597	0.24	0.08	0.16	0.27	0.2191	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.186989	NA	NA	0.228605	0.241035	NA	0.21	NA	4.301795
1222	5	135651276	135651276	G	A	intronic	TRPC7	NA	NA	NA	ncRNA_intronic	ENSG00000250947	NA	NA	NA	NA	NA	5q31.1	NA	NA	NA	NA	rs116724206	0.01	0.01	0.005	NA	NA	NA	NA	NA	NA	0.01	NA	0.01	0.002	0.014	0.018	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.452247	3.452247	NA	0.017715	0.003811	NA	0.007	NA	4.3016183
1222	19	54947646	54947646	T	C	UTR3	TTYH1	NM_020659:c.*176T>C,NM_001005367:c.*100T>C,NM_001201461:c.*176T>C	NA	NA	UTR3	ENSG00000167614	ENST00000301194:c.*176T>C,ENST00000376530:c.*176T>C,ENST00000376531:c.*100T>C	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs56363036	0.03	0.03	0.026	0.0413339	0.0318	0.0089	0.0447	0.0318	0.0951	0.02	0.01	0.06	0.04	NA	0.065	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.48392	NA	NA	NA	NA	NA	0.043	NA	4.3015334
1222	4	114135583	114135583	T	C	intronic	ANK2	NA	NA	NA	ncRNA_exonic	ENSG00000196656	NA	NA	NA	NA	NA	4q26	NA	NA	NA	NA	rs62313193	0.02	0.02	0.011	0.0109824	0.0318	NA	0.0245	0.0023	0.0031	0.03	NA	0.03	0.01	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.114293	NA	NA	NA	NA	NA	NA	NA	4.3015333
1222	12	1489929	1489929	A	G	intronic	ERC1	NA	NA	NA	ncRNA_exonic	ENSG00000249028	NA	NA	NA	NA	NA	12p13.33	NA	NA	NA	NA	rs17223476	0.04	0.04	0.032	0.0543131	0.0318	0.0109	0.0303	0.1188	0.0521	0.03	0.01	0.04	0.09	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.933054	NA	NA	NA	NA	NA	0.087	NA	4.3015333
1222	17	61988594	61988594	G	T	UTR5	CSHL1	NM_022581:c.-38C>A,NM_022579:c.-38C>A,NM_001318:c.-791C>A,NM_022580:c.-38C>A	NA	NA	UTR5	ENSG00000204414	ENST00000561003:c.-38C>A,ENST00000259003:c.-38C>A,ENST00000438387:c.-38C>A,ENST00000346606:c.-791C>A,ENST00000450719:c.-791C>A	NA	NA	NA	NA	17q23.3	NA	NA	NA	NA	rs41318510	0.01	0.01	0	0.00479233	0.0149	0.001	0.0043	0.0008	0.0041	0.01	NA	0.0028	NA	0.0074	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.065768	NA	NA	0.009651	0.004993	NA	NA	NA	4.3013824
1222	1	45457708	45457708	G	A	intergenic	EIF2B3,HECTD3	dist=5314;dist=10512	NA	NA	upstream	ENSG00000268949	NA	NA	NA	Score=609;Name=lod=398	NA	1p34.1	NA	NA	NA	NA	rs12126318	0.31	0.31	0.298	0.323682	0.1988	0.2748	0.4323	0.5045	0.181	0.2	0.25	0.36	0.48	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.471186	2.471186	NA	NA	NA	ID=COSN163070;OCCURENCE=1(breast)	0.355	NA	4.3012
1222	4	154579793	154579793	G	A	intergenic	KIAA0922,TLR2	dist=21931;dist=25648	NA	NA	ncRNA_exonic	ENSG00000248208	NA	NA	NA	Score=686;Name=lod=818	NA	4q31.3	NA	NA	NA	NA	rs6819564	0.78	0.78	0.775	0.783946	0.6988	0.874	0.8329	0.7284	0.819	0.71	0.92	0.79	0.73	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.009027	NA	NA	NA	NA	NA	0.819	NA	4.3012
1222	9	123483668	123483668	A	G	intergenic	MEGF9,FBXW2	dist=6903;dist=35586	NA	NA	ncRNA_exonic	ENSG00000238181	NA	NA	NA	Score=827;Name=lod=3057	NA	9q33.2	NA	NA	NA	NA	rs4836830	0.6	0.6	0.574	0.634185	0.6988	0.5804	0.755	0.4856	0.7382	0.7	0.55	0.74	0.42	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.005559	NA	NA	NA	NA	NA	0.623	NA	4.3012
1222	9	123484155	123484155	A	C	intergenic	MEGF9,FBXW2	dist=7390;dist=35099	NA	NA	ncRNA_exonic	ENSG00000238181	NA	NA	NA	Score=827;Name=lod=3057	NA	9q33.2	NA	NA	NA	NA	rs10818473	0.59	0.59	0.545	0.607029	0.6988	0.5754	0.7478	0.3903	0.7382	0.7	0.55	0.73	0.36	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.084537	NA	NA	NA	NA	NA	0.616	NA	4.3012
1222	16	2142942	2142942	C	T	intronic	PKD1	NA	NA	NA	ncRNA_exonic	ENSG00000259933	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs142616270	0.01	0.01	0.005	0.00459265	0.0109	NA	0.0144	0.0015	NA	0.01	NA	0.01	0.002	0.0098	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.085784	NA	NA	0.011512	0.00273	NA	NA	NA	4.3011213
1222	21	43161022	43161022	C	T	exonic	RIPK4	NA	synonymous SNV	RIPK4:NM_020639:exon8:c.G2331A:p.T777T	exonic	ENSG00000183421	NA	synonymous SNV	ENSG00000183421:ENST00000332512:exon8:c.G2331A:p.T777T,ENSG00000183421:ENST00000542057:exon8:c.G2142A:p.T714T,ENSG00000183421:ENST00000544709:exon8:c.G2142A:p.T714T,ENSG00000183421:ENST00000352483:exon9:c.G2475A:p.T825T	NA	NA	21q22.3	NA	NA	NA	NA	rs7276592	0.47	0.47	0.391	0.445487	0.4851	0.5933	0.4654	0.2799	0.4622	0.49	0.62	0.49	0.28	0.4531	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.976141	NA	NA	0.428202	0.307094	NA	0.348	NA	4.3002646
1222	5	68150992	68150992	T	C	intergenic	PIK3R1,SLC30A5	dist=553343;dist=238784	NA	NA	ncRNA_intronic	ENSG00000249335	NA	NA	NA	Score=582;Name=lod=309	NA	5q13.1	NA	NA	NA	NA	rs6887308	0.71	0.71	0.691	0.71266	0.6998	0.6647	0.7954	0.7337	0.6881	0.69	0.69	0.78	0.7	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.773258	NA	NA	NA	NA	NA	0.739	NA	4.3002
1222	11	90016778	90016778	G	A	intergenic	CHORDC1,MIR4490	dist=60246;dist=272164	NA	NA	ncRNA_exonic	ENSG00000214391	NA	NA	NA	Score=892;Name=lod=5600	NA	11q14.3	NA	NA	NA	NA	rs7101903	0.68	0.68	0.674	0.641374	0.6998	0.7718	0.6599	0.5113	0.6094	0.7	0.82	0.69	0.51	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.859213	NA	1	NA	NA	NA	0.674	NA	4.3002
1222	19	50475017	50475017	G	A	ncRNA_intronic	SIGLEC16	NA	NA	NA	ncRNA_intronic	ENSG00000161643	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs12462972	0.22	0.22	0.205	0.190695	0.1789	0.3323	0.1556	0.1558	0.1288	0.18	0.32	0.17	0.18	0.1876	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.662682	NA	NA	NA	NA	NA	0.13	NA	4.3001666
1222	6	158327269	158327269	T	C	intronic	SNX9	NA	NA	NA	intronic	ENSG00000130340	NA	NA	NA	NA	NA	6q25.3	NA	NA	Name=14	NA	rs9365567	0.22	0.22	0.228	0.223442	0.2475	0.1369	0.1427	0.2905	0.2546	0.25	0.13	0.16	0.33	0.2219	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.845529	NA	NA	0.230814	0.262596	NA	0.159	NA	4.299786
1222	10	101157160	101157160	G	A	UTR3	GOT1	NM_002079:c.*144C>T	NA	NA	UTR3	ENSG00000120053	ENST00000370508:c.*144C>T	NA	NA	NA	NA	10q24.2	NA	NA	NA	NA	rs11867	0.05	0.05	0.049	0.0567093	0.0338	0.0704	0.0259	0.0681	0.0726	0.03	0.06	0.03	0.08	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.682054	NA	NA	NA	NA	NA	0.051	NA	4.2995334
1222	2	101591844	101591844	G	T	intronic	NPAS2	NA	NA	NA	ncRNA_exonic	ENSG00000230140	NA	NA	NA	NA	NA	2q11.2	NA	NA	NA	NA	rs17025128	0.02	0.02	0.01	0.0115815	0.0338	0.001	0.0216	0.0015	0.0061	0.03	0.0017	0.02	0.0041	NA	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.397337	NA	NA	NA	NA	NA	0.022	NA	4.2995333
1222	8	66620359	66620359	G	A	exonic	MTFR1	NA	synonymous SNV	MTFR1:NM_001145839:exon7:c.G1046A:p.X349X	intronic	ENSG00000066855	NA	NA	NA	NA	NA	8q13.1	NA	NA	Name=27	NA	rs13274205	0.32	0.32	0.311	0.277356	0.5348	NA	0.3156	0.3215	0.2117	0.55	NA	0.35	0.32	0.4456	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.395184	NA	NA	0.553426	0.34104	NA	0.326	NA	4.2995073
1222	17	76496361	76496361	C	G	ncRNA_exonic	LOC100996295	NA	NA	NA	exonic	ENSG00000268470	NA	nonsynonymous SNV	ENSG00000268470:ENST00000598378:exon1:c.C293G:p.S98C	NA	NA	17q25.3	NA	NA	NA	NA	rs34124297	0.47	0.47	0.454	0.429113	0.3867	0.6865	0.4179	0.3177	0.3661	0.41	0.67	0.41	0.37	0.4622	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.749283	NA	NA	0.351625	0.329224	NA	0.464	NA	4.299475
1222	13	32348859	32348859	T	C	intronic	RXFP2	NA	NA	NA	intronic	ENSG00000133105	NA	NA	NA	NA	NA	13q13.1	NA	Name=STAT3	NA	NA	rs9549049	0.23	0.23	0.205	0.21885	0.2326	0.2659	0.2478	0.1596	0.2157	0.23	0.28	0.22	0.16	0.2343	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.786706	2.786706	NA	0.233651	0.192779	NA	0.246	NA	4.299449
1222	2	132349509	132349509	G	T	ncRNA_intronic	RNU6-81P	NA	NA	NA	ncRNA_exonic	ENSG00000204434	NA	NA	NA	NA	NA	2q21.1	NA	NA	NA	NA	rs12994124	0.25	0.25	0.222	0.225439	0.3678	0.1548	0.2075	0.1505	0.2658	0.37	0.18	0.26	0.14	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.075654	NA	NA	NA	NA	NA	0.065	NA	4.2988666
1222	19	3544971	3544971	C	T	intronic	MFSD12	NA	NA	NA	ncRNA_intronic	ENSG00000267436	NA	NA	NA	NA	NA	19p13.3	NA	Name=Pol2	NA	NA	rs12976454	0.42	0.42	0.364	0.365815	0.332	0.8075	0.4914	0.0159	0.3292	0.34	0.83	0.44	0.04	0.4119	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.186674	NA	NA	0.291657	0.05904	NA	0.297	NA	4.2977763
1222	12	6946247	6946247	G	T	exonic	LEPREL2	NA	unknown	UNKNOWN	exonic	ENSG00000110811	NA	synonymous SNV	ENSG00000110811:ENST00000251761:exon10:c.G1002T:p.A334A,ENSG00000110811:ENST00000396725:exon11:c.G1554T:p.A518A	NA	NA	12p13.31	NA	NA	NA	NA	rs1129646	0.37	0.37	0.373	0.391374	0.3469	0.3542	0.3804	0.4743	0.3712	0.34	0.3	0.41	0.46	0.3528	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.1856	NA	NA	0.3359	0.421923	ID=COSM431758,COSM431757;OCCURENCE=1(breast)	0.355	NA	4.2977333
1222	11	14279220	14279220	C	T	intronic	SPON1	NA	NA	NA	ncRNA_intronic	ENSG00000152268	NA	NA	NA	NA	NA	11p15.2	NA	NA	NA	NA	rs116877548	0.0046	0.0046	0.003	0.00339457	0.0119	NA	0.0058	NA	0.001	0.01	NA	0.01	NA	0.0102	0.014	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.063184	NA	NA	0.013737	0.00274	NA	0.007	NA	4.2974963
1222	2	31489575	31489575	G	A	UTR3	EHD3	NM_014600:c.*5G>A	NA	NA	UTR3	ENSG00000013016	ENST00000541626:c.*507G>A,ENST00000322054:c.*5G>A	NA	NA	NA	NA	2p23.1	NA	NA	NA	NA	rs77999318	0.01	0.01	0.006	0.00519169	0.0149	NA	0.0115	0.0008	0.002	0.02	NA	0.01	0.002	0.009	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.358345	NA	NA	0.011977	0.002497	NA	NA	NA	4.2974564
1222	1	109807099	109807099	G	A	exonic	CELSR2	NA	synonymous SNV	CELSR2:NM_001408:exon11:c.G5313A:p.P1771P	exonic	ENSG00000143126	NA	synonymous SNV	ENSG00000143126:ENST00000271332:exon11:c.G5313A:p.P1771P	NA	NA	1p13.3	NA	NA	NA	NA	rs6689614	0.39	0.39	0.377	0.353035	0.4751	0.497	0.4654	0.0764	0.3732	0.46	0.51	0.49	0.08	0.4286	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.754711	NA	NA	0.465698	0.132093	ID=COSM1178398;OCCURENCE=1(prostate)	0.326	NA	4.2972686
1222	5	55800724	55800724	C	T	intergenic	ANKRD55,MAP3K1	dist=271538;dist=310176	NA	NA	ncRNA_exonic	ENSG00000226221	NA	NA	NA	Score=767;Name=lod=1752	NA	5q11.2	NA	NA	NA	NA	rs25789	0.46	0.46	0.414	0.45028	0.7028	0.2242	0.6398	0.1982	0.6299	0.71	0.2	0.66	0.2	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.363606	NA	NA	NA	NA	NA	0.464	NA	4.2972
1222	5	144609070	144609070	A	G	intergenic	KCTD16,PRELID2	dist=752126;dist=529512	NA	NA	ncRNA_exonic	ENSG00000215325	NA	NA	NA	Score=452;Name=lod=92	NA	5q32	NA	NA	NA	NA	rs2547003	0.74	0.74	0.712	0.69349	0.7028	0.755	0.7983	0.7723	0.4397	0.71	0.75	0.75	0.77	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.070961	NA	NA	NA	NA	NA	0.754	NA	4.2972
1222	20	31826027	31826027	T	C	intronic	BPIFA1	NA	NA	NA	intronic	ENSG00000198183	NA	NA	NA	NA	NA	20q11.21	NA	Name=JunD	NA	NA	rs6059183	0.23	0.23	0.211	0.235823	0.2286	0.2113	0.1484	0.3298	0.2035	0.23	0.18	0.16	0.33	0.2379	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.644372	NA	NA	0.236628	0.358148	NA	0.188	NA	4.296872
1222	3	140998113	140998113	C	T	intronic	ACPL2	NA	NA	NA	ncRNA_intronic	ENSG00000249417	NA	NA	NA	NA	NA	3q23	NA	NA	NA	NA	rs75586664	0.08	0.08	0.071	0.0848642	0.0368	0.129	0.0418	0.1112	0.0838	0.03	0.16	0.03	0.1	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.099354	NA	NA	NA	NA	NA	0.051	NA	4.2965333
1222	10	52569637	52569637	G	A	intronic	A1CF	NA	NA	NA	intronic	ENSG00000148584	NA	NA	NA	NA	NA	10q11.23	NA	Name=STAT3	NA	NA	rs10994563	0.13	0.13	0.123	0.123802	0.2515	0.0685	0.1484	0.0129	0.182	0.25	0.07	0.13	0.02	0.1965	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.040082	NA	NA	0.255581	0.061053	NA	0.138	NA	4.296419
1222	4	62861964	62861964	A	T	intronic	LPHN3	NA	NA	NA	intronic	ENSG00000150471	NA	NA	NA	NA	NA	4q13.1	NA	NA	Name=11	NA	rs56038622	0.26	0.26	0.271	0.242612	0.2276	0.3393	0.2248	0.2088	0.2168	0.24	0.32	0.25	0.24	0.2407	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.643244	NA	NA	0.235329	0.214684	NA	0.174	NA	4.296371
1222	3	194379959	194379959	T	C	intronic	LSG1	NA	NA	NA	intronic	ENSG00000041802	NA	NA	NA	NA	NA	3q29	NA	NA	Name=15	NA	rs1773194	0.65	0.65	0.617	0.637181	0.7038	0.8651	0.6254	0.3374	0.7474	0.72	0.86	0.62	0.35	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.00957	NA	NA	NA	NA	NA	0.543	NA	4.2962
1222	11	65319265	65319265	T	C	intronic	LTBP3	NA	NA	NA	intronic	ENSG00000168056	NA	NA	NA	NA	NA	11q13.1	NA	Name=USF-1,ERRA,ZNF274,HDAC2_(SC-6296),HNF4A_(H-171),FOXA1_(C-20),RXRA,FOXA1_(SC-101058),FOXA2_(SC-6554),SP1,TR4,USF2	NA	NA	rs11227221	0.59	0.59	0.548	0.550919	0.7038	0.6905	0.7233	0.2239	0.5695	0.71	0.66	0.69	0.24	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.988025	NA	NA	NA	NA	NA	0.5	NA	4.2962
1222	14	90509564	90509564	C	T	UTR3	TDP1	NM_018319:c.*77C>T,NM_001008744:c.*77C>T	NA	NA	UTR3	ENSG00000042088	ENST00000554976:c.*1463C>T,ENST00000393452:c.*180C>T,ENST00000393454:c.*77C>T,ENST00000335725:c.*77C>T,ENST00000357382:c.*77C>T,ENST00000545686:c.*1227C>T,ENST00000555178:c.*1089C>T,ENST00000555880:c.*58C>T	NA	NA	NA	NA	14q32.11	NA	NA	NA	NA	rs9488	0.18	0.18	0.205	0.21845	0.0378	0.0417	0.111	0.6286	0.1084	0.04	0.05	0.12	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.014142	NA	NA	NA	NA	NA	0.196	NA	4.2955334
1222	22	51010306	51010306	C	G	ncRNA_intronic	CHKB-CPT1B	NA	NA	NA	intronic	ENSG00000205560,ENSG00000254413	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs145985628	0.02	0.02	0.009	0.0151757	0.0378	NA	0.0274	0.0038	0.0143	0.04	NA	0.02	0.01	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.212463	NA	NA	NA	NA	NA	0.014	NA	4.2955333
1222	11	6291659	6291659	G	C	intronic	CCKBR	NA	NA	NA	intronic	ENSG00000110148	NA	NA	NA	NA	NA	11p15.4	NA	Name=CTCF	NA	NA	rs12364575	0.66	0.66	0.625	0.644369	0.7048	0.9246	0.7305	0.2088	0.8211	0.73	0.92	0.72	0.23	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.260141	NA	NA	NA	NA	NA	0.703	NA	4.2952
1222	16	72039605	72039605	G	T	intergenic	PKD1L3,DHODH	dist=5728;dist=3038	NA	NA	ncRNA_exonic	ENSG00000263232	NA	NA	NA	Score=791;Name=lod=2176	NA	16q22.2	NA	NA	NA	NA	rs1820248	0.83	0.83	0.83	0.847045	0.7048	0.9653	0.8761	0.8918	0.7904	0.69	0.96	0.86	0.88	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.735414	NA	NA	NA	NA	NA	0.725	NA	4.2952
1222	17	53638670	53638670	C	A	intergenic	MMD,TMEM100	dist=139329;dist=158318	NA	NA	ncRNA_exonic	ENSG00000236319	NA	NA	NA	Score=536;Name=lod=202	NA	17q22	NA	NA	NA	NA	rs8069305	0.51	0.51	0.455	0.481629	0.7048	0.4028	0.7464	0.1142	0.6421	0.69	0.46	0.72	0.12	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.499511	NA	NA	NA	NA	NA	0.391	NA	4.2952
1222	6	24551624	24551624	A	G	intronic	KIAA0319	NA	NA	NA	intronic	ENSG00000137261	NA	NA	NA	NA	NA	6p22.3	NA	Name=MafK_(ab50322),MafF_(M8194),MafK_(SC-477)	NA	NA	rs2076313	0.26	0.26	0.265	0.281749	0.2475	0.1131	0.1772	0.531	0.228	0.25	0.11	0.2	0.52	0.2354	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.099028	NA	NA	0.222093	0.479573	NA	0.312	NA	4.295007
1223	1	74701107	74701107	C	T	UTR5	TNNI3K	NM_015978:c.-29C>T	NA	NA	UTR5	ENSG00000116783	ENST00000326637:c.-29C>T	NA	NA	NA	NA	1p31.1	NA	NA	NA	NA	rs41289180	0.01	0.01	0.007	0.00559105	0.0159	NA	0.0144	0.0008	0.001	0.02	NA	0.01	NA	0.0089	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.396632	NA	NA	0.013617	0.002724	NA	NA	NA	4.2949164
1223	1	207872657	207872657	C	T	intronic	CR1L	NA	NA	NA	intronic	ENSG00000197721	NA	NA	NA	NA	NA	1q32.2	NA	Name=CTCF	NA	NA	rs12748243	0.14	0.14	0.121	0.111621	0.2535	0.0317	0.1441	0.053	0.1043	0.26	0.04	0.18	0.05	0.1886	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.305779	NA	NA	0.26303	0.090042	NA	0.051	NA	4.29487
1223	21	47422412	47422412	C	T	intronic	COL6A1	NA	NA	NA	intronic	ENSG00000142156	NA	NA	NA	NA	NA	21q22.3	NA	Name=ERalpha_a	NA	NA	rs35796750	0.57	0.57	0.551	0.551318	0.5994	0.7202	0.6383	0.3343	0.5593	0.6	0.72	0.61	0.32	0.562	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.653591	NA	NA	0.544535	0.361552	NA	0.486	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000079787.1;CLNDSDB=.;CLNDSDBID=.	4.294065
1223	15	70342341	70342341	T	C	UTR3	TLE3	NM_001105192:c.*95A>G,NM_005078:c.*95A>G,NM_020908:c.*95A>G	NA	NA	UTR3	ENSG00000140332	ENST00000558939:c.*95A>G,ENST00000442299:c.*95A>G,ENST00000317509:c.*95A>G,ENST00000557919:c.*1050A>G,ENST00000560525:c.*786A>G,ENST00000559929:c.*95A>G,ENST00000560589:c.*95A>G,ENST00000561453:c.*1050A>G,ENST00000557997:c.*95A>G,ENST00000560939:c.*95A>G,ENST00000559048:c.*95A>G,ENST00000440567:c.*95A>G,ENST00000558201:c.*95A>G,ENST00000539550:c.*95A>G,ENST00000559191:c.*95A>G	NA	NA	NA	NA	15q23	NA	NA	NA	NA	rs71393476	0.02	0.02	0.024	0.0113818	0.0398	NA	0.0159	0.0008	0.0051	0.04	NA	0.02	0.002	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.125509	2.125509	NA	NA	NA	NA	0.014	NA	4.2935334
1223	1	21583973	21583973	A	G	intronic	ECE1	NA	NA	NA	intronic	ENSG00000117298	NA	NA	NA	NA	NA	1p36.12	NA	NA	Name=8	NA	rs3026879	0.16	0.16	0.136	0.145168	0.2386	0.131	0.2651	0.0182	0.1503	0.23	0.13	0.24	0.02	0.216	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.138295	NA	NA	0.252093	0.054698	NA	0.087	NA	4.293307
1223	1	1895177	1895177	C	T	intronic	KIAA1751	NA	NA	NA	intronic	ENSG00000142609	NA	NA	NA	NA	NA	1p36.33	NA	Name=FOXA1_(C-20),FOXA2_(SC-6554),FOXA1_(SC-101058)	NA	NA	rs7523728	0.2	0.2	0.194	0.166534	0.2386	0.1756	0.1888	0.1293	0.1176	0.24	0.21	0.2	0.12	0.2218	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.255007	NA	NA	0.246472	0.151238	NA	0.246	NA	4.293128
1223	7	134872003	134872003	C	G	intronic	WDR91	NA	NA	NA	intronic	ENSG00000105875	NA	NA	NA	NA	NA	7q33	NA	Name=Pol2-4H8,Pol2	NA	NA	rs292558	0.72	0.72	0.688	0.711462	0.7078	0.8214	0.8357	0.4939	0.8078	0.72	0.83	0.82	0.53	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.252641	NA	NA	NA	NA	NA	0.739	NA	4.2922
1223	7	134873355	134873355	G	A	intronic	WDR91	NA	NA	NA	intronic	ENSG00000105875	NA	NA	NA	NA	NA	7q33	NA	NA	Name=16	NA	rs292564	0.72	0.72	0.701	0.712061	0.7078	0.8204	0.8372	0.4962	0.8078	0.72	0.82	0.82	0.53	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.241514	NA	NA	NA	NA	NA	0.732	NA	4.2922
1223	10	30807338	30807338	A	G	intergenic	MAP3K8,LYZL2	dist=56576;dist=93370	NA	NA	ncRNA_exonic	ENSG00000213778	NA	NA	NA	Score=715;Name=lod=1078	NA	10p11.23	NA	NA	NA	NA	rs2009540	0.83	0.83	0.837	0.823682	0.7078	0.8829	0.8314	0.8676	0.817	0.72	0.91	0.83	0.91	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.243496	NA	NA	NA	NA	NA	0.674	NA	4.2922
1223	12	6601743	6601743	A	C	intronic	MRPL51	NA	NA	NA	intronic	ENSG00000111639	NA	NA	NA	NA	NA	12p13.31	Score=900;Name=V$GATA_C	NA	NA	NA	rs1001127	0.78	0.78	0.792	0.792332	0.7078	0.6696	0.8343	0.9826	0.7188	0.71	0.67	0.82	0.98	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.6618	NA	NA	NA	NA	NA	0.826	NA	4.2922
1223	10	43695049	43695049	T	C	intronic	RASGEF1A	NA	NA	NA	intronic	ENSG00000198915	NA	NA	NA	NA	NA	10q11.21	NA	Name=ZNF263	NA	NA	rs1254964	0.81	0.81	0.809	0.826677	0.7087	0.9395	0.7853	0.8185	0.8722	0.71	0.94	0.74	0.85	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.370614	NA	NA	NA	NA	NA	0.746	NA	4.2913
1223	10	52487724	52487724	T	C	intergenic	SGMS1,ASAH2B	dist=103987;dist=11964	NA	NA	ncRNA_exonic	ENSG00000213667	NA	NA	NA	Score=775;Name=lod=1882	NA	10q11.23	NA	NA	NA	NA	rs10821669	0.68	0.68	0.633	0.637979	0.7087	0.8462	0.7968	0.3669	0.6043	0.71	0.85	0.8	0.36	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.107196	NA	NA	NA	NA	NA	0.688	NA	4.2913
1223	1	39991474	39991474	A	C	ncRNA_UTR3	BMP8A	NA	NA	NA	ncRNA_UTR3	ENSG00000183682	NA	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	rs11583829	0.09	0.09	0	0.091853	0.2117	0.0218	0.072	0.0756	0.0767	0.18	0.01	0.09	0.07	0.1372	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.164535	NA	NA	0.026512	0.005447	NA	NA	NA	4.2912546
1223	4	141543997	141543997	G	A	exonic	TBC1D9	NA	synonymous SNV	TBC1D9:NM_015130:exon21:c.C3153T:p.H1051H	exonic	ENSG00000109436	NA	synonymous SNV	ENSG00000109436:ENST00000442267:exon21:c.C3153T:p.H1051H	Score=519;Name=lod=172	NA	4q31.21	NA	NA	NA	NA	rs1560440	0.78	0.78	0.777	0.822484	0.8062	0.6339	0.8343	0.9274	0.8834	0.8	0.62	0.85	0.9	0.8045	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.230762	NA	NA	0.764887	0.885956	ID=COSM1427258,COSM1427259;OCCURENCE=1(large_intestine)	0.804	NA	4.2910796
1223	17	25909850	25909850	G	T	exonic	KSR1	NA	synonymous SNV	KSR1:NM_014238:exon5:c.G288T:p.L96L	exonic	ENSG00000141068	NA	synonymous SNV	ENSG00000141068:ENST00000319524:exon4:c.G699T:p.L233L,ENSG00000141068:ENST00000509603:exon4:c.G699T:p.L233L,ENSG00000141068:ENST00000268763:exon5:c.G288T:p.L96L,ENSG00000141068:ENST00000398988:exon5:c.G288T:p.L96L,ENSG00000141068:ENST00000583370:exon6:c.G288T:p.L96L	NA	NA	17q11.2	NA	NA	NA	NA	rs2293181	0.43	0.43	0.418	0.383187	0.4911	0.4067	0.438	0.3351	0.274	0.5	0.42	0.43	0.36	0.4341	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.046131	NA	NA	0.450855	0.322465	NA	0.326	NA	4.2906116
1223	1	94487354	94487354	G	A	intronic	ABCA4	NA	NA	NA	intronic	ENSG00000198691	NA	NA	NA	NA	NA	1p22.1	NA	NA	Name=8	NA	rs472908	0.58	0.58	0.608	0.588858	0.5586	0.4633	0.5692	0.7648	0.5256	0.56	0.46	0.57	0.77	0.5819	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.733061	NA	NA	0.56907	0.749773	NA	0.58	CLINSIG=untested;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000085672.1;CLNDSDB=.;CLNDSDBID=.	4.29043
1223	1	185984517	185984517	T	C	exonic	HMCN1	NA	synonymous SNV	HMCN1:NM_031935:exon31:c.T4857C:p.H1619H	exonic	ENSG00000143341	NA	synonymous SNV	ENSG00000143341:ENST00000271588:exon31:c.T4857C:p.H1619H,ENSG00000143341:ENST00000367492:exon31:c.T4857C:p.H1619H	NA	NA	1q31.1	NA	NA	NA	NA	rs6665753	0.34	0.34	0.305	0.343051	0.4781	0.4216	0.4337	0.0325	0.4785	0.47	0.4	0.41	0.05	0.4271	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.002369	NA	NA	0.47104	0.103268	NA	0.333	NA	4.2904266
1223	14	22294079	22294079	T	G	intergenic	OR4E2,DAD1	dist=159841;dist=739728	NA	NA	exonic	ENSG00000211784	NA	synonymous SNV	ENSG00000211784:ENST00000390432:exon2:c.T183G:p.T61T	NA	NA	14q11.2	NA	NA	NA	NA	rs10459428	0.08	0.08	0.079	0.0784744	0.0736	0.121	0.0519	0.0658	0.0757	0.07	0.15	0.05	0.05	0.0703	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.343028	NA	NA	0.065799	0.061297	NA	0.087	NA	4.290301
1223	1	94476555	94476555	G	A	intronic	ABCA4	NA	NA	NA	intronic	ENSG00000198691	NA	NA	NA	NA	NA	1p22.1	NA	NA	NA	NA	rs537831	0.68	0.68	0.7	0.691494	0.7097	0.8194	0.745	0.447	0.8333	0.72	0.78	0.73	0.45	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.970888	NA	NA	NA	NA	NA	0.652	CLINSIG=untested;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000085743.1;CLNDSDB=.;CLNDSDBID=.	4.2903
1223	20	10367909	10367909	A	C	intergenic	SNAP25,MKKS	dist=79843;dist=17519	NA	NA	ncRNA_exonic	ENSG00000230750	NA	NA	NA	Score=769;Name=lod=1776	NA	20p12.2	NA	NA	NA	NA	rs6108519	0.59	0.59	0.554	0.578474	0.7097	0.3532	0.7954	0.5915	0.5041	0.7	0.35	0.73	0.59	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.83816	NA	NA	NA	NA	NA	0.601	NA	4.2903
1223	16	23692405	23692405	A	G	intronic	PLK1	NA	NA	NA	intronic	ENSG00000166851	NA	NA	NA	NA	NA	16p12.2	NA	Name=ZNF263	NA	NA	rs40076	0.3	0.3	0.274	0.3127	0.2326	0.4454	0.2925	0.3011	0.2883	0.23	0.44	0.27	0.28	0.2581	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.62037	2.62037	NA	0.21907	0.2731	NA	0.312	NA	4.29023
1223	6	32523269	32523269	C	T	ncRNA_intronic	HLA-DRB6	NA	NA	NA	ncRNA_intronic	ENSG00000229391	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs34405098	NA	NA	NA	0.419928	0.3767	0.3889	0.3444	0.5703	0.3466	NA	NA	NA	NA	NA	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.650309	NA	NA	NA	NA	NA	0.043	NA	4.2899666
1223	1	207288897	207288897	T	C	intronic	C4BPA	NA	NA	NA	intronic	ENSG00000123838	NA	NA	NA	NA	NA	1q32.2	NA	Name=CEBPB,p300_(N-15),c-Jun,JunD	Name=23	NA	rs12031629	0.51	0.51	0.462	0.455671	0.5606	0.5714	0.5187	0.2398	0.4755	0.59	0.58	0.55	0.28	0.5673	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.660234	NA	NA	0.582461	0.291004	ID=COSN163413;OCCURENCE=1(NS)	0.391	NA	4.289639
1223	4	15010113	15010113	G	A	intronic	CPEB2	NA	NA	NA	ncRNA_intronic	ENSG00000249252	NA	NA	NA	NA	NA	4p15.33	NA	NA	NA	NA	rs75021526	0.02	0.02	0.02	0.0153754	0.0437	0.001	0.0231	0.0023	0.0133	0.05	0.0017	0.03	0.0041	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.728809	NA	NA	NA	NA	NA	NA	NA	4.2896333
1223	3	43121559	43121559	C	T	exonic	GTDC2	NA	synonymous SNV	GTDC2:NM_032806:exon2:c.G1365A:p.P455P	exonic	ENSG00000144647	NA	synonymous SNV	ENSG00000144647:ENST00000344697:exon2:c.G1365A:p.P455P,ENSG00000144647:ENST00000441964:exon3:c.G1365A:p.P455P	NA	NA	3p22.1	Score=827;Name=V$NFKB_Q6	NA	NA	NA	rs604033	0.79	0.79	0.795	0.782748	0.7922	0.7401	0.8127	0.8275	0.7352	0.8	0.72	0.84	0.84	0.786	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.064769	NA	NA	0.79907	0.814571	NA	0.804	NA	4.2893966
1223	6	32523235	32523235	T	C	ncRNA_intronic	HLA-DRB6	NA	NA	NA	ncRNA_intronic	ENSG00000229391	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs73726814	NA	NA	0.376	0.420927	0.3777	0.3899	0.3458	0.5711	0.3476	NA	NA	NA	NA	NA	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.087848	NA	NA	NA	NA	NA	0.065	NA	4.2889666
1223	6	33095615	33095615	T	C	ncRNA_exonic	HLA-DPB2	NA	NA	NA	ncRNA_exonic	ENSG00000224557	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs3117014	0.35	0.35	0.32	0.366014	0.3777	0.4901	0.3444	0.1876	0.4826	0.36	0.51	0.31	0.18	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.148336	NA	NA	NA	NA	NA	0.312	NA	4.2889666
1223	6	33095636	33095636	A	G	ncRNA_exonic	HLA-DPB2	NA	NA	NA	ncRNA_exonic	ENSG00000224557	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs3117013	0.35	0.35	0.298	0.368011	0.3777	0.494	0.3444	0.1876	0.4888	0.36	0.51	0.31	0.18	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.351075	NA	NA	NA	NA	NA	0.312	NA	4.2889666
1223	6	33095684	33095684	A	G	ncRNA_exonic	HLA-DPB2	NA	NA	NA	ncRNA_exonic	ENSG00000224557	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs3117012	0.35	0.35	0.311	0.369609	0.3777	0.4901	0.3458	0.2005	0.4826	0.36	0.51	0.31	0.19	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.450886	NA	NA	NA	NA	NA	0.312	NA	4.2889666
1223	6	33095737	33095737	G	A	ncRNA_exonic	HLA-DPB2	NA	NA	NA	ncRNA_exonic	ENSG00000224557	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs9277762	0.35	0.35	0.305	0.366014	0.3777	0.4901	0.3444	0.1876	0.4826	0.36	0.51	0.31	0.18	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.804809	NA	NA	NA	NA	NA	0.312	NA	4.2889666
1223	6	33095748	33095748	C	G	ncRNA_exonic	HLA-DPB2	NA	NA	NA	ncRNA_exonic	ENSG00000224557	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs9277763	0.35	0.35	0.305	0.366014	0.3777	0.4901	0.3444	0.1876	0.4826	0.36	0.51	0.31	0.18	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.71932	NA	NA	NA	NA	NA	0.319	NA	4.2889666
1223	15	93339219	93339219	T	C	ncRNA_exonic	ASB9P1	NA	NA	NA	ncRNA_exonic	ENSG00000258527	NA	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs7164758	0.26	0.26	0.272	0.275359	0.1799	0.119	0.1441	0.6505	0.1207	0.17	0.12	0.17	0.63	0.1979	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.204759	NA	0.33	NA	NA	NA	0.232	NA	4.2888666
1223	6	10398562	10398562	G	T	UTR3	TFAP2A	NM_001042425:c.*88C>A,NM_001032280:c.*88C>A,NM_003220:c.*88C>A	NA	NA	UTR3	ENSG00000137203	ENST00000379613:c.*88C>A,ENST00000379604:c.*88C>A,ENST00000489805:c.*899C>A,ENST00000319516:c.*88C>A,ENST00000488193:c.*899C>A,ENST00000379608:c.*88C>A,ENST00000482890:c.*88C>A	NA	NA	NA	NA	6p24.3	NA	NA	NA	NA	rs10456013	0.02	0.02	0.024	0.0129792	0.0447	NA	0.0115	0.0015	0.0102	0.04	NA	0.01	0.0041	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.593358	NA	NA	NA	NA	NA	NA	NA	4.2886334
1223	6	159032234	159032234	A	G	intronic	TMEM181	NA	NA	NA	ncRNA_exonic	ENSG00000218226	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs9456330	0.02	0.02	0.021	0.0253594	0.0447	0.001	0.036	0.0023	0.0542	0.04	0.0017	0.05	0.0041	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.624483	NA	NA	NA	NA	NA	0.022	NA	4.2886333
1223	13	99105389	99105389	A	C	UTR3	STK24	NM_001032296:c.*38T>G,NM_003576:c.*38T>G	NA	NA	UTR3	ENSG00000102572	ENST00000397517:c.*38T>G,ENST00000376554:c.*38T>G,ENST00000376547:c.*38T>G,ENST00000539966:c.*38T>G	NA	NA	NA	NA	13q32.2	NA	NA	NA	NA	rs72652256	0.01	0.01	0.004	0.00638978	0.0199	NA	0.013	0.0023	NA	0.02	NA	0.01	0.002	0.0117	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.520613	NA	NA	0.01314	0.002497	NA	0.072	NA	4.2885934
1223	17	67003868	67003868	G	A	intronic	ABCA9	NA	NA	NA	ncRNA_intronic	ENSG00000231749	NA	NA	NA	NA	NA	17q24.2	NA	NA	NA	NA	rs71375717	0.01	0.01	0.011	0.0061901	0.0209	NA	0.0144	NA	NA	0.02	NA	0.02	NA	0.0093	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.47123	NA	NA	0.014685	0.002726	NA	NA	NA	4.2884483
1223	22	17669151	17669151	C	T	intronic	CECR1	NA	NA	NA	intronic	ENSG00000093072	NA	NA	NA	NA	NA	22q11.1	NA	Name=CTCF	NA	NA	rs2231496	0.71	0.71	0.687	0.67492	0.7117	0.87	0.7161	0.5106	0.6288	0.71	0.88	0.72	0.53	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.596943	NA	NA	NA	NA	NA	0.739	NA	4.2883
1223	17	45691151	45691151	A	T	intronic	NPEPPS	NA	NA	NA	ncRNA_intronic	ENSG00000263766	NA	NA	NA	NA	NA	17q21.32	NA	NA	NA	NA	rs79336981	0.01	0.01	0.007	0.0061901	0.0219	NA	0.0072	0.0008	0.0031	0.02	NA	0.01	0.0041	NA	0.023	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.61539	NA	NA	0.023256	0.005058	NA	NA	NA	4.2881773
1223	6	133836430	133836430	G	A	intronic	EYA4	NA	NA	NA	ncRNA_intronic	ENSG00000227954	NA	NA	NA	NA	NA	6q23.2	NA	NA	NA	NA	rs56378005	0.01	0.01	0.01	0.00539137	0.0169	NA	0.0101	0.0008	0.002	0.02	NA	0.02	NA	0.012	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.309353	NA	NA	0.016395	0.003631	NA	NA	NA	4.2880383
1223	19	50475174	50475174	A	C	ncRNA_intronic	SIGLEC16	NA	NA	NA	ncRNA_exonic	ENSG00000161643	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs12462945	0.22	0.22	0.199	0.197484	0.1849	0.3323	0.1614	0.1732	0.1299	0.18	0.32	0.18	0.2	0.1943	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.119682	NA	NA	NA	NA	NA	0.145	NA	4.2874666
1223	18	6985631	6985631	C	T	exonic	LAMA1	NA	synonymous SNV	LAMA1:NM_005559:exon38:c.G5391A:p.L1797L	exonic	ENSG00000101680	NA	synonymous SNV	ENSG00000101680:ENST00000389658:exon38:c.G5391A:p.L1797L	NA	NA	18p11.31	NA	NA	NA	NA	rs617206	0.55	0.55	0.529	0.552117	0.4374	0.6687	0.5908	0.5174	0.5695	0.46	0.71	0.53	0.54	0.5151	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.947348	NA	NA	0.426977	0.498184	NA	0.442	NA	4.2871896
1223	17	76475067	76475067	A	G	intronic	DNAH17	NA	NA	NA	intronic	ENSG00000187775	NA	NA	NA	NA	NA	17q25.3	NA	NA	Name=4	NA	rs56372780	0.34	0.34	0.364	0.374401	0.2157	0.2996	0.2666	0.6785	0.2802	0.22	0.29	0.26	0.66	0.2856	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.250113	NA	NA	0.212378	0.56655	NA	0.384	NA	4.286322
1223	3	66465259	66465259	T	C	intronic	LRIG1	NA	NA	NA	intronic	ENSG00000144749	NA	NA	NA	NA	NA	3p14.1	Score=909;Name=V$PAX4_03	NA	NA	NA	rs4856928	0.68	0.68	0.673	0.664137	0.7137	0.9544	0.5706	0.3941	0.7454	0.71	0.94	0.61	0.39	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.002193	NA	NA	NA	NA	NA	0.551	NA	4.2863
1223	16	28251856	28251856	C	T	intergenic	XPO6,SBK1	dist=28617;dist=51984	NA	NA	ncRNA_exonic	ENSG00000250982	NA	NA	NA	Score=780;Name=lod=1965	NA	16p11.2	NA	NA	NA	NA	rs9939733	0.63	0.63	0.624	0.605431	0.7137	0.6954	0.5476	0.407	0.7106	0.71	0.73	0.57	0.43	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.272942	NA	NA	NA	NA	NA	0.645	NA	4.2863
1223	16	28251879	28251879	G	A	intergenic	XPO6,SBK1	dist=28640;dist=51961	NA	NA	ncRNA_exonic	ENSG00000250982	NA	NA	NA	Score=780;Name=lod=1965	NA	16p11.2	NA	NA	NA	NA	rs28532123	0.63	0.63	0.624	0.610024	0.7137	0.7063	0.5504	0.407	0.7209	0.71	0.74	0.58	0.43	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.953939	2.953939	NA	NA	NA	NA	0.652	NA	4.2863
1223	19	9346427	9346427	T	C	intergenic	OR7D4,OR7E24	dist=20880;dist=15293	NA	NA	ncRNA_exonic	ENSG00000188314	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs1968136	0.84	0.84	0.807	0.814696	0.8688	0.8621	0.9035	0.7988	0.6687	0.86	0.85	0.9	0.76	0.8449	0.9	1	T	.	.	.	.	.	.	.	.	.	.	.	.	-0.955	T	0.000	T	.	-3.2	0.001	2.61	0.477	-0.548	8.554	-3.199504	NA	1	NA	NA	NA	0.775	NA	4.2863
1223	5	54563473	54563473	A	G	intronic	DHX29	NA	NA	NA	ncRNA_intronic	ENSG00000251307	NA	NA	NA	NA	NA	5q11.2	NA	NA	NA	NA	rs113232371	0.01	0.01	0.003	0.0157748	0.0099	NA	0.0187	0.0386	0.0051	0.01	NA	0.02	0.03	0.0155	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.510137	NA	NA	0.021744	0.040172	NA	NA	NA	4.2861893
1223	12	56348028	56348028	G	A	exonic	PMEL	NA	synonymous SNV	PMEL:NM_001200053:exon9:c.C1698T:p.N566N,PMEL:NM_001200054:exon11:c.C1977T:p.N659N,PMEL:NM_006928:exon12:c.C1956T:p.N652N	exonic	ENSG00000185664	NA	synonymous SNV	ENSG00000185664:ENST00000550447:exon7:c.C843T:p.N281N,ENSG00000185664:ENST00000550464:exon9:c.C1698T:p.N566N,ENSG00000185664:ENST00000539511:exon10:c.C1698T:p.N566N,ENSG00000185664:ENST00000449260:exon11:c.C1977T:p.N659N,ENSG00000185664:ENST00000548747:exon11:c.C1956T:p.N652N,ENSG00000185664:ENST00000360714:exon12:c.C1977T:p.N659N,ENSG00000185664:ENST00000548493:exon12:c.C1956T:p.N652N,ENSG00000185664:ENST00000552882:exon12:c.C1956T:p.N652N,ENSG00000185664:ENST00000536427:exon13:c.C1851T:p.N617N	Score=284;Name=lod=19	NA	12q13.2	NA	NA	NA	NA	rs1052206	0.73	0.73	0.743	0.719449	0.7932	0.7748	0.7522	0.5076	0.8497	0.8	0.8	0.72	0.53	0.777	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.852286	NA	NA	0.810465	0.554925	NA	0.768	NA	4.2860016
1223	2	89084193	89084193	A	T	ncRNA_intronic	ANKRD36BP2	NA	NA	NA	ncRNA_intronic	ENSG00000230006	NA	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs7560434	NA	NA	0.414	0.398163	0.3807	0.3552	0.4481	0.5356	0.2393	NA	NA	NA	NA	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.31387	NA	NA	NA	NA	NA	0.514	NA	4.2859666
1223	16	1605051	1605051	A	G	UTR3	TMEM204	NM_001256541:c.*24A>G,NM_024600:c.*24A>G	NA	NA	UTR3	ENSG00000131634	ENST00000253934:c.*24A>G,ENST00000566264:c.*24A>G	NA	NA	NA	NA	16p13.3	NA	Name=BCL3	NA	NA	rs9932984	0.47	0.47	0.469	0.507588	0.3151	0.5635	0.4164	0.705	0.4458	0.31	0.54	0.41	0.69	0.4019	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.109728	NA	NA	0.330607	0.618785	NA	0.377	NA	4.2857264
1223	19	49661582	49661582	T	C	intronic	TRPM4	NA	NA	NA	intronic	ENSG00000130529	NA	NA	NA	NA	NA	19q13.33	NA	Name=BAF155,NRSF,Pol2,CCNT2,ZBTB7A_(SC-34508)	Name=26	NA	rs3760664	0.65	0.65	0.627	0.599441	0.8579	0.3175	0.6715	0.5514	0.638	0.87	0.33	0.74	0.61	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.672038	NA	NA	0.85638	0.602601	NA	0.674	NA	4.28572
1223	13	103528342	103528342	G	A	UTR3	BIVM-ERCC5,ERCC5	NM_001204425:c.*89G>A;NM_000123:c.*89G>A	NA	NA	UTR3	ENSG00000134899	ENST00000355739:c.*89G>A	NA	NA	NA	NA	13q33.1	NA	NA	NA	NA	rs4150390	0.02	0.02	0.017	0.0201677	0.0477	0.001	0.013	0.0045	0.0378	0.05	NA	0.02	0.0041	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.403345	NA	NA	NA	NA	NA	0.007	NA	4.2856334
1223	17	45994094	45994094	T	C	exonic	SP2	NA	synonymous SNV	SP2:NM_003110:exon3:c.T657C:p.L219L	exonic	ENSG00000167182	NA	synonymous SNV	ENSG00000167182:ENST00000376741:exon3:c.T657C:p.L219L	NA	NA	17q21.32	NA	NA	NA	NA	rs2228251	0.57	0.57	0.562	0.568091	0.4622	0.7758	0.4813	0.615	0.4611	0.45	0.75	0.48	0.61	0.4824	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.116286	NA	NA	0.436628	0.585792	NA	0.478	NA	4.2854386
1223	6	3019654	3019654	T	C	intronic	NQO2	NA	NA	NA	intronic	ENSG00000124588	NA	NA	NA	NA	NA	6p25.2	NA	NA	Name=4	NA	rs4149370	0.76	0.76	0.779	0.758387	0.7147	0.6548	0.7334	0.9319	0.6933	0.73	0.67	0.73	0.94	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.219644	NA	NA	NA	NA	NA	0.79	NA	4.2853
1223	8	47886113	47886113	T	C	intergenic	LINC00293,LOC100287846	dist=118706;dist=214817	NA	NA	ncRNA_exonic	ENSG00000215179	NA	NA	NA	Score=816;Name=lod=2765	NA	8q11.1	NA	NA	NA	NA	rs1827125	0.76	0.76	0.761	0.743011	0.7147	0.8224	0.8473	0.7716	0.5777	0.71	0.8	0.83	0.75	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.041286	NA	0.98	NA	NA	NA	0.768	NA	4.2853
1224	2	118677916	118677916	T	C	UTR3	CCDC93	NM_019044:c.*3A>G	NA	NA	ncRNA_UTR3	ENSG00000125633	NA	NA	NA	NA	NA	2q14.1	NA	NA	NA	NA	rs35891278	0.06	0.06	0.056	0.0409345	0.0855	NA	0.072	0.0424	0.0133	0.09	NA	0.08	0.04	0.0571	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.708262	2.708262	NA	0.073953	0.048797	NA	0.029	NA	4.283447
1224	6	166574246	166574246	G	A	intronic	T	NA	NA	NA	intronic	ENSG00000164458	NA	NA	NA	NA	NA	6q27	NA	NA	NA	NA	rs3127334	0.8	0.8	0.787	0.797324	0.7167	0.8958	0.7305	0.8517	0.7526	0.7	0.88	0.77	0.86	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.511488	NA	NA	NA	NA	NA	0.862	CLINSIG=other;CLNDBN=Neural_tube_defects\x2c_susceptibility_to;CLNREVSTAT=single;CLNACC=RCV000008660.1;CLNDSDB=.;CLNDSDBID=.	4.2833
1224	13	19702018	19702018	T	C	intergenic	LINC00442,RNU6-52P	dist=115244;dist=15104	NA	NA	ncRNA_intronic	ENSG00000224778	NA	NA	NA	Score=358;Name=lod=38	NA	13q12.11	NA	NA	NA	NA	rs2010130	0.62	0.62	0.602	0.602037	0.7167	0.4573	0.6729	0.5825	0.6094	0.72	0.47	0.69	0.61	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.054769	NA	NA	NA	NA	NA	0.58	NA	4.2833
1224	14	103840904	103840904	C	G	intergenic	EIF5,MARK3	dist=29543;dist=10797	NA	NA	ncRNA_exonic	ENSG00000243904	NA	NA	NA	Score=801;Name=lod=2389	NA	14q32.32	NA	NA	NA	NA	rs11629297	0.49	0.49	0.473	0.440895	0.7167	0.4048	0.5749	0.1641	0.4734	0.72	0.4	0.6	0.18	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.400849	1.400849	NA	NA	NA	NA	0.507	NA	4.2833
1224	1	31907089	31907089	T	C	UTR3	SERINC2	NM_001199038:c.*43T>C,NM_001199037:c.*43T>C,NM_178865:c.*43T>C,NM_001199039:c.*43T>C,NM_018565:c.*43T>C	NA	NA	UTR3	ENSG00000168528	ENST00000373710:c.*43T>C,ENST00000536859:c.*43T>C,ENST00000373709:c.*43T>C,ENST00000536384:c.*43T>C	NA	NA	NA	NA	1p35.2	NA	NA	NA	NA	rs141375854	0.01	0.01	0.004	0.00519169	0.0169	NA	0.0115	NA	0.001	0.02	NA	0.01	NA	0.0136	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.084551	NA	NA	0.019884	0.003858	NA	0.007	NA	4.2829494
1224	7	64004644	64004644	T	G	intronic	ZNF680	NA	NA	NA	intronic	ENSG00000173041	NA	NA	NA	NA	NA	7q11.21	NA	Name=PU.1	NA	NA	rs58967958	0.2	0.2	0.181	0.211062	0.2475	0.0833	0.2205	0.1914	0.3252	0.27	0.09	0.23	0.22	0.2294	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.564628	NA	NA	0.240465	0.200182	ID=COSN168094;OCCURENCE=1(large_intestine)	0.159	NA	4.282635
1224	15	93588264	93588264	G	C	exonic	RGMA	NA	synonymous SNV	RGMA:NM_001166286:exon3:c.C1269G:p.L423L,RGMA:NM_001166283:exon4:c.C1341G:p.L447L,RGMA:NM_001166287:exon4:c.C1269G:p.L423L,RGMA:NM_001166288:exon4:c.C1269G:p.L423L,RGMA:NM_001166289:exon4:c.C1269G:p.L423L,RGMA:NM_020211:exon4:c.C1317G:p.L439L	exonic	ENSG00000182175	NA	synonymous SNV	ENSG00000182175:ENST00000542321:exon3:c.C1269G:p.L423L,ENSG00000182175:ENST00000329082:exon4:c.C1317G:p.L439L,ENSG00000182175:ENST00000425933:exon4:c.C1269G:p.L423L,ENSG00000182175:ENST00000543599:exon4:c.C1269G:p.L423L,ENSG00000182175:ENST00000557301:exon4:c.C1341G:p.L447L,ENSG00000182175:ENST00000538818:exon5:c.C990G:p.L330L,ENSG00000182175:ENST00000556658:exon5:c.C990G:p.L330L	NA	NA	15q26.1	NA	NA	NA	NA	rs4299103	0.48	0.48	0.445	0.47504	0.4215	0.7073	0.4856	0.3313	0.4775	0.38	0.73	0.47	0.37	0.5305	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.246126	NA	NA	0.432096	0.352604	NA	0.406	NA	4.2825706
1224	6	75833876	75833876	C	A	intronic	COL12A1	NA	NA	NA	intronic	ENSG00000111799	NA	NA	NA	NA	NA	6q13	NA	Name=CTCF	NA	NA	rs240722	0.74	0.74	0.75	0.763778	0.7177	0.6974	0.732	0.8434	0.7945	0.71	0.7	0.73	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.196035	NA	NA	NA	NA	NA	0.725	NA	4.2823
1224	10	100182285	100182285	T	C	intronic	HPS1	NA	NA	NA	intronic	ENSG00000107521	NA	NA	NA	Score=393;Name=lod=53	NA	10q24.2	NA	NA	NA	NA	rs2296435	0.24	0.24	0.223	0.257588	0.2087	0.3472	0.2752	0.112	0.3998	0.21	0.37	0.26	0.13	0.2696	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.784411	2.784411	NA	0.239651	0.140036	NA	0.152	NA	4.282049
1224	15	42282242	42282242	G	A	intronic	PLA2G4E	NA	NA	NA	ncRNA_intronic	ENSG00000246740	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs28538627	0.09	0.09	0.075	0.107628	0.0517	0.2252	0.0821	0.0038	0.2025	0.04	0.22	0.09	0.01	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.792353	1.792353	NA	NA	NA	NA	0.065	NA	4.2816333
1224	17	78073562	78073562	A	G	exonic	CCDC40	NA	synonymous SNV	CCDC40:NM_017950:exon20:c.A3417G:p.P1139P	exonic	ENSG00000141519	NA	synonymous SNV	ENSG00000141519:ENST00000397545:exon20:c.A3417G:p.P1139P	NA	NA	17q25.3	NA	NA	NA	NA	rs2304854	0.48	0.48	0.498	0.501597	0.4751	0.4355	0.2911	0.6513	0.544	0.47	0.48	0.28	0.64	0.4633	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.091345	NA	NA	0.446844	0.58665	NA	0.464	NA	4.2814226
1224	9	13987094	13987094	A	C	intergenic	LINC00583,NFIB	dist=41488;dist=94748	NA	NA	ncRNA_exonic	ENSG00000229268	NA	NA	NA	Score=487;Name=lod=127	NA	9p23	NA	NA	NA	NA	rs870409	0.59	0.59	0.577	0.599641	0.7187	0.2679	0.6455	0.6989	0.6524	0.72	0.27	0.67	0.7	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.230578	NA	NA	NA	NA	NA	0.616	NA	4.2813
1224	9	83397674	83397674	G	A	intergenic	TLE4,TLE1	dist=1056018;dist=800924	NA	NA	ncRNA_exonic	ENSG00000234637	NA	NA	NA	Score=690;Name=lod=849	NA	9q21.31	NA	NA	NA	NA	rs6559588	0.84	0.84	0.842	0.83726	0.7187	0.9762	0.8098	0.857	0.8088	0.73	0.99	0.79	0.89	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.117838	NA	NA	NA	NA	NA	0.804	NA	4.2813
1224	14	21190514	21190514	A	C	intergenic	RNASE4,EDDM3A	dist=21756;dist=23585	NA	NA	ncRNA_exonic	ENSG00000259144	NA	NA	NA	Score=728;Name=lod=1210	NA	14q11.2	NA	NA	NA	NA	rs4982348	0.6	0.6	0.57	0.630192	0.7187	0.372	0.7089	0.6838	0.6769	0.68	0.37	0.7	0.68	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.237957	NA	NA	NA	NA	NA	0.645	NA	4.2813
1224	1	116260544	116260544	C	T	intronic	CASQ2	NA	NA	NA	intronic	ENSG00000118729	NA	NA	NA	NA	NA	1p13.1	NA	Name=CTCF	NA	NA	rs3811001	0.25	0.25	0.239	0.250799	0.2555	0.1825	0.2824	0.2375	0.3119	0.26	0.22	0.31	0.23	0.2359	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.682706	NA	NA	0.227442	0.224467	NA	0.341	NA	4.281158
1224	4	3577989	3577989	C	T	upstream	FLJ35424	NA	NA	NA	upstream	ENSG00000216560	NA	NA	NA	NA	NA	4p16.3	NA	NA	Name=2	NA	rs62275434	NA	NA	NA	0.397165	0.3857	0.4137	0.4107	0.3911	0.3906	NA	NA	NA	NA	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.754095	NA	NA	NA	NA	NA	0.326	NA	4.2809666
1224	9	100105735	100105735	T	C	exonic	CCDC180	NA	synonymous SNV	CCDC180:NM_020893:exon19:c.T2520C:p.C840C	exonic	ENSG00000197816	NA	synonymous SNV	ENSG00000197816:ENST00000529487:exon19:c.T2520C:p.C840C,ENSG00000197816:ENST00000357054:exon33:c.T2937C:p.C979C,ENSG00000197816:ENST00000375202:exon33:c.T2520C:p.C840C,ENSG00000197816:ENST00000411667:exon33:c.T2511C:p.C837C	NA	NA	9q22.33	NA	NA	NA	NA	rs1947717	0.56	0.56	0.565	0.59365	0.3936	0.5843	0.6628	0.7458	0.5542	0.4	0.6	0.61	0.71	0.5305	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.675703	NA	NA	0.462791	0.725148	NA	0.471	NA	4.2797756
1224	8	22995324	22995324	C	T	UTR3	TNFRSF10D	NM_003840:c.*59G>A	NA	NA	UTR3	ENSG00000173530	ENST00000312584:c.*59G>A	NA	NA	NA	NA	8p21.3	NA	NA	NA	NA	rs78341389	0.04	0.04	0.025	0.0253594	0.0537	NA	0.098	NA	0.0051	0.06	NA	0.09	NA	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.222869	NA	NA	NA	NA	NA	0.022	NA	4.2796334
1224	19	45422561	45422561	T	G	UTR3	APOC1	NM_001645:c.*74T>G	NA	NA	UTR3	ENSG00000130208	ENST00000588750:c.*74T>G,ENST00000588802:c.*74T>G,ENST00000252491:c.*74T>G,ENST00000592885:c.*81T>G,ENST00000589781:c.*100T>G,ENST00000592176:c.*326T>G,ENST00000586638:c.*81T>G,ENST00000590334:c.*195T>G	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs1064725	0.03	0.03	0.021	0.0295527	0.0537	NA	0.0259	NA	0.0777	0.06	NA	0.04	NA	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.171295	NA	NA	NA	NA	NA	0.022	NA	4.2796334
1224	12	53295551	53295551	T	G	intronic	KRT8	NA	NA	NA	intronic	ENSG00000170421	NA	NA	NA	NA	NA	12q13.13	NA	Name=Pol2	NA	NA	rs2035876	0.8	0.8	0.821	0.840455	0.7207	0.8522	0.7622	0.9644	0.8395	0.69	0.86	0.72	0.95	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.689455	NA	NA	NA	NA	NA	0.674	NA	4.2793
1224	7	157151234	157151234	C	T	intronic	DNAJB6	NA	NA	NA	intronic	ENSG00000105993	NA	NA	NA	NA	NA	7q36.3	NA	Name=KAP1,CTCF	Name=10	NA	rs3802100	0.61	0.61	0.571	0.569089	0.5746	0.746	0.6037	0.4206	0.5573	0.58	0.75	0.63	0.47	0.5734	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.419692	NA	NA	0.57314	0.458239	NA	0.551	NA	4.27886
1224	8	145584731	145584731	A	G	UTR3	SLC52A2	NM_001253816:c.*56A>G,NM_001253815:c.*56A>G,NM_024531:c.*56A>G	NA	NA	UTR3	ENSG00000185803	ENST00000530047:c.*56A>G,ENST00000402965:c.*56A>G,ENST00000329994:c.*56A>G,ENST00000532887:c.*56A>G,ENST00000540505:c.*56A>G,ENST00000526752:c.*63A>G	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs11546261	0.02	0.02	0.014	0.0215655	0.0547	NA	0.0331	0.0023	0.0276	0.05	NA	0.03	0.002	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.087495	NA	NA	NA	NA	NA	0.022	NA	4.2786334
1224	3	12188495	12188495	A	G	intronic	SYN2	NA	NA	NA	ncRNA_intronic	ENSG00000157152	NA	NA	NA	NA	NA	3p25.2	NA	NA	NA	NA	rs11708978	0.04	0.04	0.037	0.0353435	0.0547	0.0248	0.0303	0.0189	0.0521	0.06	0.03	0.04	0.03	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.563253	NA	NA	NA	NA	NA	0.058	NA	4.2786333
1224	7	43548516	43548516	C	T	ncRNA_exonic	LOC100506895	NA	NA	NA	ncRNA_exonic	ENSG00000231638	NA	NA	NA	NA	NA	7p13	NA	NA	NA	NA	rs2304323	0.11	0.11	NA	0.0996406	0.1899	0.0397	0.1182	0.0129	0.1728	0.2	0.05	0.13	0.02	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.694498	NA	NA	0.198393	0.035388	NA	0.138	NA	4.2783736
1224	16	78082862	78082862	C	T	intergenic	CLEC3A,WWOX	dist=16861;dist=50465	NA	NA	ncRNA_exonic	ENSG00000260731	NA	NA	NA	Score=655;Name=lod=615	NA	16q23.1	NA	NA	NA	NA	rs12919818	0.59	0.59	0.553	0.573882	0.7217	0.631	0.6398	0.2542	0.7485	0.74	0.62	0.66	0.26	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.461114	NA	NA	NA	NA	NA	0.522	NA	4.2783
1224	16	78083477	78083477	C	G	intergenic	CLEC3A,WWOX	dist=17476;dist=49850	NA	NA	ncRNA_exonic	ENSG00000260731	NA	NA	NA	Score=754;Name=lod=1545	NA	16q23.1	NA	NA	NA	NA	rs12924402	0.59	0.59	0.537	0.572883	0.7217	0.631	0.6354	0.2542	0.7464	0.74	0.62	0.66	0.27	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.131273	NA	NA	NA	NA	NA	0.522	NA	4.2783
1224	17	37183667	37183667	G	C	intergenic	FBXO47,LRRC37A11P	dist=60012;dist=2492	NA	NA	ncRNA_exonic	ENSG00000214553	NA	NA	NA	NA	NA	17q12	NA	NA	Name=29	NA	rs6503741	0.73	0.73	0.651	0.748403	0.7217	0.6558	0.879	0.7958	0.7147	0.71	0.6	0.86	0.79	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.260673	NA	NA	NA	NA	NA	0.638	NA	4.2783
1224	11	119148573	119148573	G	T	intronic	CBL	NA	NA	NA	intronic	ENSG00000110395	NA	NA	NA	NA	NA	11q23.3	NA	Name=TAL1_(SC-12984),GATA2_(CG2-96)	NA	NA	rs2510152	0.64	0.64	0.711	0.728634	0.5765	0.879	0.4424	0.8336	0.7914	0.53	0.81	0.48	0.72	0.6011	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.695003	NA	NA	0.544354	0.781264	NA	0.79	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=Rasopathy|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000049226.1|RCV000124135.1;CLNDSDB=MedGen|.;CLNDSDBID=CN166718|.	4.278046
1224	2	113305150	113305150	G	C	intronic	POLR1B	NA	NA	NA	intronic	ENSG00000125630	NA	NA	NA	NA	NA	2q13	NA	Name=CEBPB	Name=84	NA	rs11123139	0.49	0.49	0.507	0.493411	0.5785	0.4018	0.5173	0.4947	0.4816	0.57	0.35	0.56	0.49	0.54	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.121802	NA	NA	0.603605	0.529732	NA	0.587	NA	4.277895
1224	3	54919480	54919480	G	A	ncRNA_intronic	CACNA2D3-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000243715	NA	NA	NA	NA	NA	3p14.3	NA	NA	NA	NA	rs2293662	0.11	0.11	0.108	0.122404	0.1252	0.0625	0.1124	0.1339	0.1728	0.11	0.06	0.14	0.15	0.1262	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.14266	NA	NA	0.137399	0.127628	NA	0.087	NA	4.2778676
1224	16	78082453	78082453	T	C	intergenic	CLEC3A,WWOX	dist=16452;dist=50874	NA	NA	ncRNA_exonic	ENSG00000260731	NA	NA	NA	Score=505;Name=lod=151	NA	16q23.1	NA	NA	NA	NA	rs11646244	0.59	0.59	0.548	0.573682	0.7227	0.631	0.6398	0.2534	0.7474	0.74	0.62	0.66	0.26	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.351515	NA	NA	NA	NA	NA	0.42	NA	4.2773
1224	16	78082681	78082681	G	A	intergenic	CLEC3A,WWOX	dist=16680;dist=50646	NA	NA	ncRNA_exonic	ENSG00000260731	NA	NA	NA	Score=655;Name=lod=615	NA	16q23.1	NA	NA	NA	NA	rs12918409	0.59	0.59	0.564	0.573682	0.7227	0.631	0.6398	0.2534	0.7474	0.74	0.62	0.66	0.26	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.485017	NA	NA	NA	NA	NA	0.471	NA	4.2773
1224	16	78082746	78082746	G	A	intergenic	CLEC3A,WWOX	dist=16745;dist=50581	NA	NA	ncRNA_exonic	ENSG00000260731	NA	NA	NA	Score=655;Name=lod=615	NA	16q23.1	NA	NA	NA	NA	rs12918547	0.59	0.59	0.556	0.574081	0.7227	0.631	0.6398	0.2542	0.7485	0.74	0.62	0.66	0.26	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.197983	NA	NA	NA	NA	NA	0.522	NA	4.2773
1224	16	78082760	78082760	C	G	intergenic	CLEC3A,WWOX	dist=16759;dist=50567	NA	NA	ncRNA_exonic	ENSG00000260731	NA	NA	NA	Score=655;Name=lod=615	NA	16q23.1	NA	NA	NA	NA	rs12919672	0.59	0.59	0.546	0.573882	0.7227	0.631	0.6398	0.2534	0.7485	0.74	0.62	0.66	0.26	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.65779	NA	NA	NA	NA	NA	0.522	NA	4.2773
1224	16	78083005	78083005	C	T	intergenic	CLEC3A,WWOX	dist=17004;dist=50322	NA	NA	ncRNA_exonic	ENSG00000260731	NA	NA	NA	Score=754;Name=lod=1545	NA	16q23.1	NA	NA	NA	NA	rs12920025	0.59	0.59	0.553	0.573882	0.7227	0.631	0.6398	0.2534	0.7485	0.74	0.62	0.66	0.26	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.195332	NA	NA	NA	NA	NA	0.522	NA	4.2773
1224	16	78083115	78083115	T	C	intergenic	CLEC3A,WWOX	dist=17114;dist=50212	NA	NA	ncRNA_exonic	ENSG00000260731	NA	NA	NA	Score=754;Name=lod=1545	NA	16q23.1	NA	NA	NA	NA	rs12924772	0.59	0.59	0.554	0.573882	0.7227	0.631	0.6398	0.2534	0.7485	0.74	0.62	0.66	0.26	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.004876	NA	NA	NA	NA	NA	0.514	NA	4.2773
1224	14	106926223	106926223	T	C	intergenic	LINC00226,LINC00221	dist=181257;dist=12232	NA	NA	exonic	ENSG00000232216	NA	nonsynonymous SNV	ENSG00000232216:ENST00000434710:exon2:c.A319G:p.T107A	NA	NA	14q32.33	NA	NA	NA	NA	rs2467912	0.26	0.26	0.239	NA	NA	NA	NA	NA	NA	0.27	0.14	0.2	0.41	0.2919	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-3.35059	NA	1	0.264347	0.404234	NA	0.275	NA	4.2770864
1224	14	77767382	77767382	A	G	intronic	POMT2	NA	NA	NA	intronic	ENSG00000009830	NA	NA	NA	NA	NA	14q24.3	NA	Name=CTCF,ZBTB7A_(SC-34508)	NA	NA	rs2287392	0.3	0.3	0.267	0.295927	0.2187	0.4702	0.366	0.2005	0.2751	0.2	0.48	0.33	0.22	0.2681	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.158347	NA	NA	0.236279	0.186564	NA	0.188	NA	4.276921
1224	14	100599164	100599164	G	A	intronic	EVL	NA	NA	NA	intronic	ENSG00000196405	NA	NA	NA	NA	NA	14q32.2	NA	Name=GATA-2	Name=49	NA	rs941897	0.5	0.5	0.507	0.514776	0.5775	0.2391	0.5893	0.5605	0.6196	0.59	0.25	0.61	0.56	0.5632	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.308271	NA	NA	0.582791	0.571039	ID=COSN164781;OCCURENCE=1(breast)	0.514	NA	4.276509
1224	2	89266057	89266057	C	T	intergenic	MIR4436A,NONE	dist=154089;dist=NONE	NA	NA	exonic	ENSG00000239855	NA	synonymous SNV	ENSG00000239855:ENST00000464162:exon2:c.G75A:p.Q25Q	NA	NA	2p11.2	NA	NA	NA	NA	rs112636307	0.03	0.03	0.03	0.0493211	0.0785	0.005	0.0548	0.003	0.1237	0.07	0.0035	0.03	0.002	0.0656	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.483617	NA	NA	0.079568	0.017755	NA	0.014	NA	4.276332
1224	11	119692871	119692871	T	C	intergenic	PVRL1,TRIM29	dist=93436;dist=289123	NA	NA	upstream	ENSG00000254406	NA	NA	NA	Score=533;Name=lod=196	NA	11q23.3	NA	NA	NA	NA	rs11217524	0.15	0.15	0.139	0.138179	0.2237	0.0288	0.1254	0.205	0.0818	0.24	0.02	0.13	0.19	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.637083	NA	NA	NA	NA	NA	0.138	NA	4.2763
1224	16	78083149	78083149	A	C	intergenic	CLEC3A,WWOX	dist=17148;dist=50178	NA	NA	ncRNA_exonic	ENSG00000260731	NA	NA	NA	Score=754;Name=lod=1545	NA	16q23.1	NA	NA	NA	NA	rs12920830	0.59	0.59	0.558	0.574681	0.7237	0.631	0.6398	0.2557	0.7485	0.74	0.62	0.66	0.27	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.252783	NA	NA	NA	NA	NA	0.522	NA	4.2763
1224	17	33332629	33332629	G	A	downstream	LIG3	NA	NA	NA	ncRNA_exonic	ENSG00000224113	NA	NA	NA	Score=654;Name=lod=608	NA	17q12	NA	NA	NA	NA	rs12948362	0.32	0.32	0.294	0.303714	0.4771	0.3085	0.3487	0.112	0.3476	0.48	0.26	0.35	0.12	0.4136	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.71837	NA	NA	NA	NA	NA	0.304	NA	4.2759666
1224	19	12089947	12089947	C	T	UTR3	ZNF763	NM_001012753:c.*23C>T	NA	NA	UTR3	ENSG00000197054,ENSG00000267179	ENST00000538752:c.*23C>T,ENST00000545530:c.*23C>T,ENST00000343949:c.*23C>T,ENST00000358987:c.*23C>T;ENST00000590798:c.*23C>T	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs111486980	0.02	0.02	0.014	0.019369	0.0229	0.006	0.0144	0.0257	0.0245	0.02	0.01	0.02	0.03	0.0168	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.191667	NA	NA	0.017911	0.027538	NA	0.014	NA	4.2757224
1224	10	128821671	128821671	G	A	intronic	DOCK1	NA	NA	NA	ncRNA_intronic	ENSG00000223528,ENSG00000232935	NA	NA	NA	NA	NA	10q26.2	NA	NA	NA	NA	rs7076668	0.03	0.03	0.018	0.019369	0.0577	0.001	0.0288	0.0045	0.0123	0.06	NA	0.04	0.01	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.301964	NA	NA	NA	NA	NA	0.014	NA	4.2756333
1224	2	12164189	12164189	C	T	intergenic	MIR4262,TRIB2	dist=187077;dist=692809	NA	NA	ncRNA_intronic	ENSG00000224184	NA	NA	NA	Score=679;Name=lod=768	NA	2p25.1	NA	NA	NA	NA	rs4668745	0.58	0.58	0.497	0.567093	0.7247	0.6141	0.6758	0.2103	0.7618	0.73	0.6	0.66	0.25	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.944567	NA	NA	NA	NA	NA	0.522	NA	4.2753
1224	18	55361778	55361778	C	T	intronic	ATP8B1	NA	NA	NA	ncRNA_intronic	ENSG00000267040,ENSG00000267787	NA	NA	NA	NA	NA	18q21.31	NA	NA	NA	NA	rs319444	0.01	0.01	0.005	0.00638978	0.0199	NA	0.0101	0.0008	0.0041	0.02	NA	0.01	0.002	0.0168	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.499668	NA	NA	0.021633	0.004095	NA	NA	NA	4.2750003
1225	6	31382994	31382994	C	A	UTR3	MICA	NM_001177519:c.*235C>A,NM_000247:c.*78C>A	NA	NA	ncRNA_UTR3	ENSG00000204520	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs1880	0.27	0.27	0.225	0.276358	0.2256	0.2312	0.2939	0.351	0.2618	0.24	0.21	0.33	0.36	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.457699	NA	NA	NA	NA	NA	0.145	NA	4.2744
1225	8	95986927	95986927	A	G	intergenic	TP53INP1,NDUFAF6	dist=25312;dist=50287	NA	NA	ncRNA_exonic	ENSG00000253528	NA	NA	NA	Score=689;Name=lod=842	NA	8q22.1	NA	NA	NA	NA	rs10086284	0.69	0.69	0.666	0.672324	0.7256	0.7798	0.7061	0.503	0.7117	0.75	0.75	0.72	0.51	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.507047	NA	NA	NA	NA	NA	0.638	NA	4.2744
1225	8	15967582	15967582	A	C	UTR3	MSR1	NM_138715:c.*12T>G,NM_138716:c.*12T>G	NA	NA	UTR3	ENSG00000038945	ENST00000350896:c.*12T>G,ENST00000262101:c.*12T>G,ENST00000445506:c.*12T>G	NA	NA	NA	NA	8p22	NA	NA	NA	NA	rs12677608	0.05	0.05	0.038	0.0656949	0.0099	0.1319	0.072	0.0129	0.1217	0.01	0.15	0.06	0.01	0.0415	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.007049	NA	NA	0.008488	0.019292	NA	0.022	NA	4.2734454
1225	6	162864317	162864317	A	G	intronic	PARK2	NA	NA	NA	intronic	ENSG00000185345	NA	NA	NA	NA	NA	6q26	NA	NA	Name=12	NA	rs2075923	0.27	0.27	0.267	0.273363	0.2445	0.1806	0.2507	0.4334	0.1984	0.25	0.18	0.25	0.41	0.253	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.112597	NA	NA	0.229419	0.384703	NA	0.326	NA	4.273081
1225	6	29895250	29895250	C	T	intergenic	HCG4B,HLA-A	dist=1822;dist=14997	NA	NA	ncRNA_intronic	ENSG00000230795	NA	NA	NA	NA	NA	6p22.1	NA	Name=Pol2,c-Myc	NA	NA	rs1655937	0.7	0.7	0.726	0.729034	0.7276	0.6349	0.7911	0.764	0.7362	0.72	0.63	0.73	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.059401	NA	NA	NA	NA	NA	0.543	NA	4.2724
1225	6	29795636	29795636	G	A	exonic	HLA-G	NA	synonymous SNV	HLA-G:NM_002127:exon2:c.G15A:p.A5A	exonic	ENSG00000204632	NA	synonymous SNV	ENSG00000204632:ENST00000360323:exon1:c.G15A:p.A5A,ENSG00000204632:ENST00000376815:exon1:c.G15A:p.A5A,ENSG00000204632:ENST00000376818:exon1:c.G15A:p.A5A,ENSG00000204632:ENST00000478519:exon1:c.G15A:p.A5A,ENSG00000204632:ENST00000376828:exon2:c.G30A:p.A10A,ENSG00000204632:ENST00000428701:exon2:c.G15A:p.A5A	NA	NA	6p22.1	NA	NA	NA	NA	rs1630223	0.5	0.5	0.505	0.544329	0.4324	0.6032	0.4654	0.5083	0.7035	0.42	0.64	0.46	0.5	0.4994	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.509456	NA	NA	0.462717	0.508934	NA	0.572	NA	4.2721496
1225	19	36673300	36673300	T	C	UTR3	ZNF565	NM_001042474:c.*68A>G,NM_152477:c.*68A>G	NA	NA	UTR3	ENSG00000196357	ENST00000304116:c.*68A>G,ENST00000355114:c.*68A>G,ENST00000392173:c.*68A>G	NA	NA	NA	NA	19q13.12	NA	NA	NA	NA	rs16970932	0.07	0.07	0.069	0.0700879	0.0616	NA	0.0447	0.1861	0.0123	0.06	NA	0.05	0.18	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.190926	NA	NA	NA	NA	NA	0.058	NA	4.2717334
1225	18	7015714	7015714	T	C	intronic	LAMA1	NA	NA	NA	intronic	ENSG00000101680	NA	NA	NA	NA	NA	18p11.31	Score=804;Name=V$MYCMAX_03	NA	NA	NA	rs603258	0.23	0.23	0.233	0.241414	0.2445	0.0972	0.1412	0.3797	0.271	0.26	0.09	0.16	0.39	0.2371	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.257437	NA	NA	0.246744	0.322969	NA	0.37	NA	4.271656
1225	2	132182448	132182448	G	A	intergenic	LOC389043,LOC401010	dist=16647;dist=17286	NA	NA	upstream	ENSG00000214077	NA	NA	NA	Score=742;Name=lod=1384	NA	2q21.1	NA	NA	NA	NA	rs1880994	0.35	0.35	0.227	0.365415	0.2286	0.754	0.5115	0.1346	0.3139	0.21	0.7	0.4	0.11	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.310261	NA	NA	NA	NA	NA	0.29	NA	4.2714
1225	22	31583007	31583007	A	G	intronic	RNF185	NA	NA	NA	intronic	ENSG00000138942	NA	NA	NA	NA	NA	22q12.2	Score=841;Name=V$CEBP_C	NA	NA	NA	rs5997902	0.82	0.82	0.852	0.842252	0.7286	0.881	0.7435	0.972	0.8139	0.72	0.88	0.76	0.97	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.74642	1.74642	NA	NA	NA	NA	0.826	NA	4.2714
1225	6	29342825	29342825	G	A	exonic	OR12D3	NA	synonymous SNV	OR12D3:NM_030959:exon1:c.C240T:p.L80L	exonic	ENSG00000112462	NA	synonymous SNV	ENSG00000112462:ENST00000396806:exon1:c.C240T:p.L80L	NA	NA	6p22.1	NA	NA	NA	NA	rs3749970	0.32	0.32	0.302	0.286941	0.494	0.255	0.3646	0.0651	0.3517	0.52	0.25	0.36	0.05	0.4234	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.393222	NA	NA	0.478405	0.13055	ID=COSM451128;OCCURENCE=1(breast)	0.225	NA	4.2708616
1225	13	99336919	99336919	T	C	UTR3	SLC15A1	NM_005073:c.*59A>G	NA	NA	UTR3	ENSG00000088386	ENST00000376503:c.*59A>G	NA	NA	NA	NA	13q32.3	NA	NA	NA	NA	rs7331216	0.09	0.09	0.06	0.102436	0.0626	0.0298	0.1455	0.1687	0.0982	0.07	0.04	0.14	0.14	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.981969	NA	NA	NA	NA	NA	0.094	NA	4.2707334
1225	6	73697308	73697308	G	A	intronic	KCNQ5	NA	NA	NA	ncRNA_exonic	ENSG00000232422	NA	NA	NA	NA	NA	6q13	NA	NA	NA	NA	rs16886069	NA	NA	NA	0.1875	0.0626	0.247	0.2133	0.2678	0.1278	NA	NA	NA	NA	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.599907	NA	NA	NA	NA	NA	0.181	NA	4.2707333
1225	10	115242720	115242720	T	A	intergenic	TCF7L2,HABP2	dist=315284;dist=67870	NA	NA	ncRNA_exonic	ENSG00000230018	NA	NA	NA	Score=644;Name=lod=552	NA	10q25.3	NA	NA	NA	NA	rs3758592	0.8	0.8	0.79	0.796326	0.7306	0.8909	0.8473	0.7526	0.7894	0.75	0.89	0.8	0.77	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.285803	NA	NA	NA	NA	NA	0.761	NA	4.2694
1225	22	22730634	22730634	G	A	intergenic	LOC96610,ZNF280B	dist=53310;dist=108138	NA	NA	exonic	ENSG00000211650	NA	synonymous SNV	ENSG00000211650:ENST00000390296:exon2:c.G129A:p.L43L	NA	NA	22q11.22	NA	Name=MafK_(ab50322)	NA	NA	rs2009587	0.41	0.41	0.328	0.409545	0.4592	0.5575	0.4539	0.1952	0.4642	0.45	0.54	0.4	0.2	0.3854	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.040248	NA	NA	0.38611	0.197122	NA	0.391	NA	4.26929
1225	4	98893476	98893476	C	T	exonic	STPG2	NA	synonymous SNV	STPG2:NM_174952:exon7:c.G888A:p.S296S	exonic	ENSG00000163116	NA	synonymous SNV	ENSG00000163116:ENST00000522676:exon1:c.G30A:p.S10S,ENSG00000163116:ENST00000295268:exon7:c.G888A:p.S296S	NA	NA	4q23	NA	NA	NA	NA	rs783959	0.41	0.41	0.387	0.409345	0.4751	0.2431	0.5403	0.3714	0.4714	0.47	0.23	0.52	0.42	0.4572	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.494868	NA	NA	0.465116	0.357921	ID=COSM149717;OCCURENCE=1(stomach),1(prostate)	0.326	NA	4.2692506
1225	11	68840412	68840412	C	G	exonic	TPCN2	NA	synonymous SNV	TPCN2:NM_139075:exon13:c.C1173G:p.L391L	exonic	ENSG00000162341	NA	synonymous SNV	ENSG00000162341:ENST00000294309:exon13:c.C1173G:p.L391L,ENSG00000162341:ENST00000542467:exon13:c.C1173G:p.L391L	NA	NA	11q13.3	NA	NA	NA	NA	rs1466220	0.38	0.38	0.363	0.334465	0.4841	0.2867	0.3271	0.3601	0.2004	0.46	0.28	0.36	0.38	0.414	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.28132	NA	NA	0.499418	0.388864	NA	0.333	NA	4.2691486
1225	17	48274309	48274309	T	C	intronic	COL1A1	NA	NA	NA	intronic	ENSG00000108821	NA	NA	NA	NA	NA	17q21.33	NA	Name=Pol2,CEBPB,c-Jun	Name=72	NA	rs2075554	0.75	0.75	0.749	0.744609	0.8638	0.6766	0.6873	0.7262	0.7577	0.87	0.65	0.73	0.72	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.068168	NA	NA	0.867379	0.742775	NA	0.732	NA	4.268821
1225	9	131001692	131001692	G	C	intronic	DNM1	NA	NA	NA	intronic	ENSG00000106976	NA	NA	NA	NA	NA	9q34.11	NA	Name=ZNF263	NA	NA	rs10987942	0.41	0.41	0.43	0.461661	0.2097	0.4732	0.2406	0.7829	0.4315	0.21	0.48	0.27	0.74	0.3058	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.499057	NA	NA	0.215814	0.716977	NA	0.42	NA	4.268686
1225	18	43247001	43247001	C	G	exonic	SLC14A2	NA	synonymous SNV	SLC14A2:NM_007163:exon13:c.C1659G:p.V553V,SLC14A2:NM_001242692:exon14:c.C1659G:p.V553V	exonic	ENSG00000132874	NA	synonymous SNV	ENSG00000132874:ENST00000589658:exon2:c.C90G:p.V30V,ENSG00000132874:ENST00000255226:exon13:c.C1659G:p.V553V,ENSG00000132874:ENST00000586448:exon14:c.C1659G:p.V553V	Score=490;Name=lod=131	NA	18q12.3	NA	NA	NA	NA	rs2156609	0.65	0.65	0.631	0.65016	0.7962	0.4296	0.7464	0.621	0.6984	0.8	0.42	0.77	0.6	0.7684	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.898233	NA	NA	0.833605	0.628461	ID=COSM148425;OCCURENCE=1(stomach)	0.551	NA	4.2684616
1225	4	68905270	68905270	A	G	intergenic	TMPRSS11GP,TMPRSS11F	dist=42113;dist=13646	NA	NA	ncRNA_exonic	ENSG00000227725	NA	NA	NA	Score=518;Name=lod=170	NA	4q13.2	NA	NA	NA	NA	rs4860275	0.66	0.66	0.626	0.635783	0.7316	0.8651	0.562	0.3661	0.7178	0.74	0.87	0.62	0.32	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.737312	NA	NA	NA	NA	NA	0.601	NA	4.2684
1225	10	115242531	115242531	T	G	intergenic	TCF7L2,HABP2	dist=315095;dist=68059	NA	NA	ncRNA_exonic	ENSG00000230018	NA	NA	NA	Score=528;Name=lod=186	NA	10q25.3	NA	NA	NA	NA	rs1046528	0.8	0.8	0.792	0.796526	0.7316	0.8919	0.8473	0.7519	0.7894	0.75	0.89	0.8	0.77	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.182839	NA	NA	NA	NA	NA	0.761	NA	4.2684
1225	15	32971934	32971934	C	T	intronic	SCG5	NA	NA	NA	intronic	ENSG00000166922	NA	NA	NA	NA	NA	15q13.3	NA	NA	Name=9	NA	rs7177843	0.31	0.31	0.301	0.344249	0.2227	0.5645	0.2925	0.2224	0.4438	0.22	0.54	0.29	0.22	0.2971	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.770147	NA	NA	0.211908	0.216991	NA	0.29	NA	4.268292
1225	11	68840397	68840397	T	C	exonic	TPCN2	NA	synonymous SNV	TPCN2:NM_139075:exon13:c.T1158C:p.Y386Y	exonic	ENSG00000162341	NA	synonymous SNV	ENSG00000162341:ENST00000294309:exon13:c.T1158C:p.Y386Y,ENSG00000162341:ENST00000542467:exon13:c.T1158C:p.Y386Y	NA	NA	11q13.3	NA	NA	NA	NA	rs1466221	0.38	0.38	0.369	0.338059	0.4851	0.2867	0.3329	0.3699	0.2004	0.46	0.28	0.37	0.38	0.4153	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.211667	NA	NA	0.498137	0.400227	ID=COSM1162432;OCCURENCE=1(pancreas)	0.29	NA	4.2681296
1225	20	48491258	48491258	T	G	exonic	SLC9A8	NA	synonymous SNV	SLC9A8:NM_001260491:exon11:c.T1023G:p.L341L,SLC9A8:NM_015266:exon11:c.T975G:p.L325L	exonic	ENSG00000197818	NA	synonymous SNV	ENSG00000197818:ENST00000539601:exon9:c.T318G:p.L106L,ENSG00000197818:ENST00000541138:exon9:c.T75G:p.L25L,ENSG00000197818:ENST00000361573:exon11:c.T975G:p.L325L,ENSG00000197818:ENST00000417961:exon11:c.T1023G:p.L341L	Score=533;Name=lod=196	NA	20q13.13	NA	NA	NA	NA	rs542234	0.81	0.81	0.804	0.822883	0.7952	0.8373	0.8256	0.8033	0.8609	0.79	0.85	0.83	0.78	0.8105	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.301027	1.301027	NA	0.792907	0.788924	NA	0.783	NA	4.2680596
1225	1	89729383	89729383	T	C	intronic	GBP5	NA	NA	NA	ncRNA_intronic	ENSG00000237568	NA	NA	NA	NA	NA	1p22.2	NA	NA	NA	NA	rs116350128	0.01	0.01	0.008	0.00798722	0.0239	NA	0.0173	NA	0.0041	0.02	NA	0.02	NA	0.0179	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.868341	NA	NA	0.023721	0.00522	NA	0.029	NA	4.2678123
1225	13	26434282	26434282	G	A	intronic	ATP8A2	NA	NA	NA	intronic	ENSG00000132932	NA	NA	NA	NA	NA	13q12.13	NA	Name=GATA3_(SC-268)	NA	NA	rs34288901	0.19	0.19	0.183	0.19349	0.2565	0.2014	0.2378	0.0885	0.2311	0.24	0.2	0.23	0.07	0.2234	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.52979	NA	NA	0.252615	0.10356	NA	0.152	NA	4.267485
1225	4	69727312	69727312	G	A	intergenic	UGT2B10,UGT2A3	dist=29571;dist=66865	NA	NA	ncRNA_exonic	ENSG00000249235	NA	NA	NA	Score=403;Name=lod=58	NA	4q13.2	NA	NA	NA	NA	rs13123929	0.58	0.58	0.563	0.586861	0.7326	0.5437	0.5331	0.4153	0.7515	0.72	0.54	0.57	0.42	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.300627	1.300627	NA	NA	NA	NA	0.558	NA	4.2674
1225	22	50499957	50499957	G	A	UTR3	MLC1	NM_139202:c.*55C>T,NM_015166:c.*55C>T	NA	NA	UTR3	ENSG00000100427	ENST00000311597:c.*55C>T,ENST00000395876:c.*55C>T,ENST00000538737:c.*55C>T,ENST00000431262:c.*55C>T,ENST00000535444:c.*55C>T,ENST00000450140:c.*55C>T	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs41283496	0.02	0.02	0.016	0.0133786	0.0378	NA	0.0331	0.0015	0.0041	0.03	NA	0.04	0.002	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.534747	NA	NA	0.028284	0.005058	NA	NA	NA	4.2672494
1225	15	75650836	75650836	G	A	exonic	MAN2C1	NA	synonymous SNV	MAN2C1:NM_001256496:exon18:c.C2073T:p.D691D,MAN2C1:NM_001256494:exon20:c.C2421T:p.D807D,MAN2C1:NM_001256495:exon20:c.C2370T:p.D790D,MAN2C1:NM_006715:exon20:c.C2370T:p.D790D	exonic	ENSG00000140400	NA	synonymous SNV	ENSG00000140400:ENST00000563622:exon18:c.C2073T:p.D691D,ENSG00000140400:ENST00000267978:exon20:c.C2370T:p.D790D,ENSG00000140400:ENST00000565683:exon20:c.C2421T:p.D807D,ENSG00000140400:ENST00000569482:exon20:c.C2370T:p.D790D	NA	NA	15q24.2	NA	NA	NA	NA	rs1128933	0.36	0.36	0.328	0.366414	0.4662	0.4782	0.4337	0.0393	0.5429	0.48	0.44	0.43	0.04	0.4634	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.9587	NA	NA	0.470075	0.113109	NA	0.457	NA	4.2669916
1225	17	56636854	56636854	T	C	exonic	TEX14	NA	synonymous SNV	TEX14:NM_031272:exon30:c.A4227G:p.E1409E,TEX14:NM_001201457:exon31:c.A4365G:p.E1455E,TEX14:NM_198393:exon31:c.A4347G:p.E1449E	exonic	ENSG00000121101	NA	synonymous SNV	ENSG00000121101:ENST00000349033:exon30:c.A4227G:p.E1409E,ENSG00000121101:ENST00000240361:exon31:c.A4365G:p.E1455E,ENSG00000121101:ENST00000389934:exon31:c.A4347G:p.E1449E	Score=425;Name=lod=71	NA	17q22	NA	NA	NA	NA	rs7225128	0.88	0.88	0.877	0.896965	0.7734	1	0.8718	0.9123	0.9151	0.79	1	0.84	0.9	0.8413	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.325299	NA	NA	0.785	0.900817	ID=COSM1178444;OCCURENCE=1(prostate)	0.826	NA	4.2669666
1225	18	2750204	2750204	C	T	intronic	SMCHD1	NA	NA	NA	ncRNA_intronic	ENSG00000266049	NA	NA	NA	NA	NA	18p11.32	NA	NA	NA	NA	rs2304861	0.16	0.16	0.136	0.173323	0.0666	0.4355	0.1182	0.084	0.1728	0.06	0.39	0.1	0.09	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.817317	NA	NA	NA	NA	ID=COSN165566;OCCURENCE=1(breast)	0.123	NA	4.2667333
1225	20	61341286	61341286	A	G	intronic	NTSR1	NA	NA	NA	intronic	ENSG00000101188	NA	NA	NA	NA	NA	20q13.33	NA	NA	Name=7	NA	rs3746780	0.27	0.27	0.256	0.277955	0.2316	0.0675	0.3112	0.5514	0.1493	0.21	0.08	0.33	0.52	0.2798	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.032342	NA	NA	0.22195	0.487132	NA	0.225	NA	4.26665
1225	7	140698551	140698551	A	T	intergenic	BRAF,MRPS33	dist=73987;dist=7410	NA	NA	ncRNA_exonic	ENSG00000242703	NA	NA	NA	Score=599;Name=lod=362	NA	7q34	NA	NA	NA	NA	rs12672764	0.69	0.69	0.654	0.632388	0.7336	0.8175	0.7983	0.3616	0.5859	0.73	0.84	0.77	0.39	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.856527	NA	NA	NA	NA	NA	0.703	NA	4.2664
1225	18	9396597	9396597	A	G	intronic	TWSG1	NA	NA	NA	exonic	ENSG00000128791	NA	synonymous SNV	ENSG00000128791:ENST00000581641:exon4:c.A543G:p.P181P	NA	NA	18p11.22	NA	NA	NA	NA	rs2298550	0.28	0.28	0.271	0.262979	0.2744	0.2857	0.2608	0.2027	0.3108	0.29	0.33	0.25	0.21	0.2928	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.172179	NA	NA	NA	NA	NA	0.21	NA	4.2661333
1225	18	29993180	29993180	C	T	intronic	GAREM	NA	NA	NA	ncRNA_exonic	ENSG00000262477	NA	NA	NA	NA	NA	18q12.1	NA	NA	NA	NA	rs11873369	0.05	0.05	0.05	0.0373403	0.0676	0.004	0.0447	0.0484	0.0204	0.07	0.01	0.06	0.05	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.120139	2.120139	NA	NA	NA	NA	0.022	NA	4.2657333
1225	1	157679691	157679691	C	T	intergenic	FCRL3,FCRL2	dist=9044;dist=35832	NA	NA	downstream	ENSG00000231700	NA	NA	NA	Score=728;Name=lod=1209	NA	1q23.1	NA	NA	NA	NA	rs17676303	0.18	0.18	0.181	0.157348	0.2346	0.2103	0.1945	0.062	0.1258	0.22	0.19	0.22	0.07	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.587345	2.587345	NA	NA	NA	NA	0.217	NA	4.2654
1225	1	157679783	157679783	A	G	intergenic	FCRL3,FCRL2	dist=9136;dist=35740	NA	NA	downstream	ENSG00000231700	NA	NA	NA	Score=728;Name=lod=1209	NA	1q23.1	NA	NA	NA	NA	rs17727309	0.18	0.18	0.171	0.157348	0.2346	0.2103	0.1945	0.062	0.1258	0.22	0.19	0.22	0.07	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.744841	2.744841	NA	NA	NA	NA	0.217	NA	4.2654
1225	1	157680114	157680114	T	C	intergenic	FCRL3,FCRL2	dist=9467;dist=35409	NA	NA	downstream	ENSG00000231700	NA	NA	NA	Score=728;Name=lod=1209	NA	1q23.1	NA	NA	NA	NA	rs17727339	0.18	0.18	0.159	0.157348	0.2346	0.2103	0.1945	0.062	0.1258	0.22	0.19	0.22	0.07	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.525432	NA	NA	NA	NA	NA	0.217	NA	4.2654
1225	1	157680273	157680273	T	C	intergenic	FCRL3,FCRL2	dist=9626;dist=35250	NA	NA	downstream	ENSG00000231700	NA	NA	NA	Score=728;Name=lod=1209	NA	1q23.1	NA	NA	NA	NA	rs72708379	0.18	0.18	0.161	0.157348	0.2346	0.2103	0.1945	0.062	0.1258	0.22	0.19	0.22	0.07	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.05851	NA	NA	NA	NA	NA	0.181	NA	4.2654
1225	3	178211391	178211391	C	T	intergenic	KCNMB2-IT1,KCNMB2	dist=36298;dist=42833	NA	NA	ncRNA_exonic	ENSG00000271131	NA	NA	NA	Score=608;Name=lod=396	NA	3q26.32	NA	NA	NA	NA	rs9290650	0.76	0.76	0.765	0.794329	0.7346	0.6002	0.7608	0.9735	0.8374	0.74	0.62	0.76	0.95	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.076695	NA	NA	NA	NA	NA	0.79	NA	4.2654
1225	4	68905097	68905097	G	A	intergenic	TMPRSS11GP,TMPRSS11F	dist=41940;dist=13819	NA	NA	ncRNA_exonic	ENSG00000227725	NA	NA	NA	Score=518;Name=lod=170	NA	4q13.2	NA	NA	NA	NA	rs4860273	0.7	0.7	0.72	0.690495	0.7346	0.8651	0.5865	0.5424	0.7393	0.74	0.87	0.65	0.5	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.515316	NA	NA	NA	NA	NA	0.63	NA	4.2654
1225	6	31244331	31244331	C	T	intergenic	HLA-C,HLA-B	dist=4418;dist=77318	NA	NA	ncRNA_exonic	ENSG00000214892	NA	NA	NA	Score=383;Name=lod=48	NA	6p21.33	NA	NA	NA	NA	rs9264740	0.71	0.71	0.742	0.720647	0.7346	0.7609	0.7061	0.7065	0.6943	0.73	0.72	0.68	0.72	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.747944	2.747944	NA	NA	NA	NA	0.71	NA	4.2654
1226	20	42225114	42225114	G	A	exonic	IFT52	NA	synonymous SNV	IFT52:NM_016004:exon3:c.G159A:p.V53V	exonic	ENSG00000101052	NA	synonymous SNV	ENSG00000101052:ENST00000373030:exon3:c.G159A:p.V53V,ENSG00000101052:ENST00000373039:exon3:c.G159A:p.V53V	Score=639;Name=lod=528	NA	20q13.12	NA	NA	NA	NA	rs2664519	0.75	0.75	0.742	0.744409	0.826	0.7927	0.7882	0.5915	0.7863	0.82	0.76	0.8	0.58	0.7806	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.152407	NA	NA	0.795465	0.637767	NA	0.754	NA	4.2646016
1226	17	10319056	10319056	A	G	intronic	MYH8	NA	NA	NA	ncRNA_intronic	ENSG00000214970	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs75077369	0.01	0.01	0.008	0.0111821	0.0209	NA	0.0086	NA	0.0297	0.02	NA	0.01	NA	0.0243	0.024	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.774707	NA	NA	0.023721	0.002724	NA	0.007	NA	4.2644123
1226	11	103908735	103908735	G	A	exonic	DDI1	NA	synonymous SNV	DDI1:NM_001001711:exon1:c.G1185A:p.E395E	exonic	ENSG00000170967	NA	synonymous SNV	ENSG00000170967:ENST00000302259:exon1:c.G1185A:p.E395E	NA	NA	11q22.3	NA	NA	NA	NA	rs1052313	0.39	0.39	0.36	0.36881	0.4751	0.3988	0.5807	0.1082	0.4305	0.48	0.4	0.55	0.13	0.4606	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.048277	NA	NA	0.466566	0.176632	NA	0.348	NA	4.2644006
1226	7	154897906	154897906	G	A	intergenic	HTR5A,INSIG1	dist=18804;dist=191580	NA	NA	upstream	ENSG00000228806	NA	NA	NA	Score=576;Name=lod=291	NA	7q36.2	NA	NA	NA	NA	rs1617427	0.23	0.23	0.225	0.229233	0.2356	0.3284	0.1671	0.152	0.2689	0.23	0.35	0.15	0.12	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.166871	NA	NA	NA	NA	NA	0.254	NA	4.2644
1226	8	70041943	70041943	T	C	intergenic	LOC100505718,SULF1	dist=25518;dist=336916	NA	NA	ncRNA_exonic	ENSG00000254332	NA	NA	NA	Score=770;Name=lod=1788	NA	8q13.2	NA	NA	NA	NA	rs2433331	0.86	0.86	0.869	0.894369	0.7356	1	0.8213	0.9448	0.9325	0.74	1	0.8	0.93	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.533076	NA	NA	NA	NA	NA	0.804	NA	4.2644
1226	17	15688159	15688159	T	C	intergenic	CDRT15P2,MEIS3P1	dist=19156;dist=2005	NA	NA	downstream	ENSG00000227018	NA	NA	NA	Score=631;Name=lod=491	NA	17p12	NA	NA	NA	NA	rs11867683	0.17	0.17	0.154	0.169529	0.2356	0.1895	0.1945	0.0522	0.2219	0.24	0.19	0.19	0.04	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.188365	NA	NA	NA	NA	NA	0.145	NA	4.2644
1226	1	10706167	10706167	G	A	intronic	CASZ1	NA	NA	NA	ncRNA_intronic	ENSG00000272078	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs145649674	0.01	0.01	0.005	0.00678914	0.0159	NA	0.013	0.0023	0.0061	0.02	NA	0.01	0.002	0.019	0.035	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.803378	NA	NA	0.034524	0.008459	NA	0.007	NA	4.2639093
1226	20	55918377	55918377	C	T	ncRNA_intronic	MIR5095	NA	NA	NA	intronic	ENSG00000054796	NA	NA	NA	NA	NA	20q13.31	NA	NA	NA	NA	rs6099560	0.03	0.03	0.033	0.0327476	0.0219	0.001	0.0144	0.0847	0.0194	0.02	NA	0.02	0.08	0.0252	0.084	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.37	NA	NA	0.022352	0.08356	NA	0.087	NA	4.2638813
1226	1	248247748	248247748	G	A	intronic	OR2L13	NA	NA	NA	ncRNA_exonic	ENSG00000197067	NA	NA	NA	NA	NA	1q44	NA	NA	NA	NA	rs59550975	NA	NA	NA	0.139177	0.0696	0.0903	0.0519	0.3427	0.0481	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.092801	NA	NA	NA	NA	NA	NA	NA	4.2637333
1226	5	153726882	153726882	A	G	intronic	GALNT10	NA	NA	NA	ncRNA_intronic	ENSG00000245275	NA	NA	NA	NA	NA	5q33.2	NA	NA	NA	NA	rs10515707	0.06	0.06	0.062	0.0646965	0.0696	NA	0.0447	0.1157	0.0716	0.07	NA	0.05	0.11	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.425049	NA	NA	NA	NA	NA	0.036	NA	4.2637333
1226	16	30510571	30510571	C	T	intronic	ITGAL	NA	NA	NA	ncRNA_intronic	ENSG00000261332	NA	NA	NA	NA	NA	16p11.2	NA	NA	Name=2	NA	rs1557672	0.37	0.37	0.366	0.27476	0.3807	0.5675	0.2709	0.0976	0.1063	0.39	0.62	0.28	0.1	0.3274	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.340322	3.340322	NA	0.361512	0.140419	NA	0.261	NA	4.2637213
1226	2	219602819	219602819	G	A	exonic	TTLL4	NA	synonymous SNV	TTLL4:NM_014640:exon3:c.G420A:p.P140P	exonic	ENSG00000135912	NA	synonymous SNV	ENSG00000135912:ENST00000258398:exon1:c.G420A:p.P140P,ENSG00000135912:ENST00000437755:exon2:c.G420A:p.P140P,ENSG00000135912:ENST00000392102:exon3:c.G420A:p.P140P,ENSG00000135912:ENST00000442769:exon3:c.G420A:p.P140P	NA	NA	2q35	NA	NA	NA	NA	rs3731876	0.47	0.47	0.501	0.473442	0.4662	0.1409	0.4366	0.8585	0.3292	0.46	0.16	0.43	0.85	0.4607	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.883106	NA	NA	0.476047	0.811847	NA	0.616	NA	4.2637196
1226	1	33954352	33954352	A	G	intronic	ZSCAN20	NA	NA	NA	intronic	ENSG00000121903	NA	NA	NA	NA	NA	1p35.1	NA	Name=JunD	NA	NA	rs3795418	0.75	0.75	0.77	0.753794	0.7366	0.7381	0.6254	0.854	0.7434	0.74	0.75	0.65	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.936139	NA	NA	NA	NA	NA	0.855	NA	4.2634
1226	7	154898033	154898033	C	T	intergenic	HTR5A,INSIG1	dist=18931;dist=191453	NA	NA	upstream	ENSG00000228806	NA	NA	NA	Score=664;Name=lod=666	NA	7q36.2	NA	NA	NA	NA	rs1657265	0.23	0.23	0.239	0.230431	0.2366	0.3304	0.1729	0.152	0.2679	0.23	0.35	0.16	0.12	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.072268	NA	NA	NA	NA	NA	0.254	NA	4.2634
1226	8	70041973	70041973	A	G	intergenic	LOC100505718,SULF1	dist=25548;dist=336886	NA	NA	ncRNA_exonic	ENSG00000254332	NA	NA	NA	Score=770;Name=lod=1788	NA	8q13.2	NA	NA	NA	NA	rs642372	0.84	0.84	NA	0.906749	0.7366	1	0.8228	0.9902	0.9325	0.7	0.97	0.77	0.96	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.686382	NA	NA	NA	NA	NA	0.87	NA	4.2634
1226	10	135097196	135097196	T	G	intronic	TUBGCP2	NA	NA	NA	intronic	ENSG00000130640	NA	NA	NA	NA	NA	10q26.3	NA	NA	NA	NA	NA	NA	NA	0.588	0.63139	0.7366	0.8313	0.6383	0.3805	0.6513	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.944752	NA	NA	NA	NA	NA	NA	NA	4.2634
1226	1	229795045	229795045	G	C	UTR3	URB2	NM_014777:c.*1G>C	NA	NA	UTR3	ENSG00000135763	ENST00000258243:c.*1G>C	NA	NA	NA	NA	1q42.13	NA	NA	NA	NA	rs41309637	0.01	0.01	0.003	0.00479233	0.0199	NA	0.0029	NA	0.002	0.02	NA	0.01	NA	0.0209	0.029	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.774429	NA	NA	0.029535	0.006128	NA	NA	NA	4.2629984
1226	3	130424393	130424393	C	T	intronic	PIK3R4	NA	NA	NA	intronic	ENSG00000196455	NA	NA	NA	NA	NA	3q22.1	NA	Name=GATA3_(SC-268)	NA	NA	rs7652761	0.4	0.4	0.395	0.446486	0.2217	0.3671	0.4164	0.7307	0.3967	0.21	0.41	0.38	0.7	0.3069	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.173901	NA	NA	0.208488	0.655243	NA	0.377	NA	4.262912
1226	20	55915254	55915254	C	G	ncRNA_intronic	MIR5095	NA	NA	NA	intronic	ENSG00000054796	NA	NA	NA	NA	NA	20q13.31	NA	NA	NA	NA	rs6092461	0.03	0.03	0.031	0.0319489	0.0219	NA	0.0144	0.0832	0.0184	0.02	NA	0.02	0.08	0.0261	0.087	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.97633	NA	NA	0.022442	0.086739	NA	0.087	NA	4.2628913
1226	17	1675138	1675138	C	T	intronic	SERPINF1	NA	NA	NA	UTR5	ENSG00000132386	ENST00000573763:c.-190C>T,ENST00000572048:c.-150C>T	NA	NA	NA	NA	17p13.3	NA	NA	Name=16	NA	rs4274475	0.3	0.3	0.264	0.299321	0.3072	0.4087	0.353	0.1188	0.3845	0.32	0.39	0.3	0.14	0.3092	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.294239	1.294239	NA	0.287442	0.152973	NA	0.246	NA	4.2628247
1226	21	46315022	46315022	C	T	intronic	ITGB2	NA	NA	NA	intronic	ENSG00000160255	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs2838725	0.19	0.19	0.198	0.207268	0.2495	0.0903	0.1614	0.2572	0.2495	0.23	0.09	0.19	0.26	0.2351	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.983537	NA	NA	0.252674	0.255107	NA	0.109	CLINSIG=untested;CLNDBN=Leukocyte_adhesion_deficiency_type_1;CLNREVSTAT=not;CLNACC=RCV000087129.1;CLNDSDB=MedGen:OMIM:Orphanet:Orphanet;CLNDSDBID=C1861766:116920:ORPHA2968:ORPHA99842	4.262726
1226	16	20552075	20552075	G	T	exonic	ACSM2B	NA	synonymous SNV	ACSM2B:NM_001105069:exon13:c.C1530A:p.I510I,ACSM2B:NM_182617:exon14:c.C1530A:p.I510I	exonic	ENSG00000066813	NA	synonymous SNV	ENSG00000066813:ENST00000565322:exon12:c.C1293A:p.I431I,ENSG00000066813:ENST00000329697:exon13:c.C1530A:p.I510I,ENSG00000066813:ENST00000565232:exon14:c.C1530A:p.I510I,ENSG00000066813:ENST00000567001:exon14:c.C1530A:p.I510I	Score=443;Name=lod=84	NA	16p12.3	NA	NA	NA	NA	rs16970280	0.71	0.71	0.677	0.70607	0.7972	0.4187	0.8444	0.8101	0.6697	0.78	0.44	0.83	0.83	0.7775	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.80342	NA	NA	0.829419	0.786104	NA	0.746	NA	4.2625476
1226	2	78640076	78640076	A	G	intergenic	SNAR-H,REG3G	dist=457924;dist=612736	NA	NA	ncRNA_exonic	ENSG00000214429	NA	NA	NA	Score=635;Name=lod=510	NA	2p12	NA	NA	NA	NA	rs2018108	0.74	0.74	0.711	0.732228	0.7376	0.7401	0.8329	0.7027	0.6871	0.73	0.71	0.79	0.73	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.052083	NA	NA	NA	NA	NA	0.826	NA	4.2624
1226	15	42695875	42695875	C	T	intronic	CAPN3	NA	NA	NA	ncRNA_intronic	ENSG00000258461	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs17764849	0.02	0.02	0.028	0.0263578	0.0298	0.006	0.0303	0.0492	0.0102	0.03	NA	0.03	0.04	NA	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.396956	NA	NA	0.041509	0.041185	NA	0.029	NA	4.2620243
1226	12	64057520	64057520	T	C	intronic	DPY19L2	NA	NA	NA	ncRNA_intronic	ENSG00000249753	NA	NA	NA	NA	NA	12q14.2	NA	NA	NA	NA	rs11532475	0.06	0.06	0.058	0.0854633	0.0119	0.1528	0.0187	0.0961	0.1247	0.01	0.12	0.02	0.08	0.0425	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.0623	NA	NA	0.017097	0.070132	NA	0.043	NA	4.2618363
1226	22	30125620	30125620	G	A	UTR3	CABP7	NM_182527:c.*62G>A	NA	NA	UTR3	ENSG00000100314	ENST00000216144:c.*62G>A	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs5997508	0.09	0.09	0.092	0.103634	0.0716	0.0198	0.111	0.1755	0.1207	0.08	0.02	0.1	0.18	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.301527	NA	NA	NA	NA	NA	0.072	NA	4.2617334
1226	10	91505768	91505768	C	T	intronic	KIF20B	NA	NA	NA	intronic	ENSG00000138182	NA	NA	NA	NA	NA	10q23.31	NA	Name=CTCF	NA	NA	rs12414650	0.17	0.17	0.186	0.174321	0.2535	0.0069	0.2061	0.1831	0.2311	0.26	0.01	0.23	0.18	0.2264	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.281326	NA	NA	0.25877	0.186134	NA	0.232	NA	4.26133
1226	19	12090054	12090054	G	A	UTR3	ZNF763	NM_001012753:c.*130G>A	NA	NA	UTR3	ENSG00000197054,ENSG00000267179	ENST00000538752:c.*130G>A,ENST00000545530:c.*130G>A,ENST00000343949:c.*130G>A,ENST00000358987:c.*130G>A;ENST00000590798:c.*130G>A	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs279141	0.17	0.17	0.192	0.195487	0.0726	0.0278	0.0749	0.5764	0.0654	0.06	0.04	0.08	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.842557	NA	NA	NA	NA	NA	0.232	NA	4.2607334
1226	16	77393207	77393207	G	C	intronic	ADAMTS18	NA	NA	NA	intronic	ENSG00000140873	NA	NA	NA	NA	NA	16q23.1	NA	Name=USF-1,c-Jun,HDAC2_(SC-6296),FOSL2,JunD,FOXA1_(C-20),HNF4A_(H-171),p300,BHLHE40,GR,FOXA1_(SC-101058),FOXA2_(SC-6554),SP1,TCF4	Name=90	NA	rs2650907	0.47	0.47	0.498	0.46246	0.5924	0.3323	0.3285	0.4697	0.5481	0.61	0.31	0.39	0.49	0.5468	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.014139	NA	NA	0.600116	0.491583	NA	0.565	NA	4.260684
1226	1	158848721	158848721	T	G	intergenic	MNDA,PYHIN1	dist=29451;dist=52616	NA	NA	ncRNA_exonic	ENSG00000229849	NA	NA	NA	NA	NA	1q23.1	Score=913;Name=V$CEBPA_01	NA	NA	NA	rs2427820	0.8	0.8	0.759	0.782748	0.7396	0.9623	0.8429	0.7027	0.7076	0.74	0.95	0.82	0.7	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.367331	NA	NA	NA	NA	NA	0.79	NA	4.2604
1226	7	29690705	29690705	C	A	ncRNA_exonic	LOC646762	NA	NA	NA	ncRNA_exonic	ENSG00000225264	NA	NA	NA	NA	NA	7p14.3	NA	NA	NA	NA	rs1641211	0.38	0.38	0.39	0.382788	0.4066	0.0694	0.4164	0.6959	0.2342	0.39	0.06	0.42	0.7	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.411599	NA	NA	NA	NA	NA	0.551	NA	4.2600666
1226	9	21278463	21278463	A	G	ncRNA_exonic	IFNA22P	NA	NA	NA	ncRNA_exonic	ENSG00000224416	NA	NA	NA	NA	NA	9p21.3	NA	NA	NA	NA	rs10120675	0.42	0.42	0.389	0.394968	0.4066	0.4692	0.4193	0.357	0.3405	0.4	0.47	0.45	0.35	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.139628	NA	NA	NA	NA	NA	0.471	NA	4.2600666
1226	11	85725937	85725937	C	T	exonic	PICALM	NA	synonymous SNV	PICALM:NM_001008660:exon5:c.G522A:p.Q174Q,PICALM:NM_001206946:exon5:c.G522A:p.Q174Q,PICALM:NM_001206947:exon5:c.G369A:p.Q123Q,PICALM:NM_007166:exon5:c.G522A:p.Q174Q	exonic	ENSG00000073921	NA	synonymous SNV	ENSG00000073921:ENST00000356360:exon5:c.G522A:p.Q174Q,ENSG00000073921:ENST00000393346:exon5:c.G522A:p.Q174Q,ENSG00000073921:ENST00000525162:exon5:c.G369A:p.Q123Q,ENSG00000073921:ENST00000526033:exon5:c.G522A:p.Q174Q,ENSG00000073921:ENST00000528398:exon5:c.G369A:p.Q123Q,ENSG00000073921:ENST00000532317:exon5:c.G522A:p.Q174Q,ENSG00000073921:ENST00000528256:exon6:c.G420A:p.Q140Q,ENSG00000073921:ENST00000531930:exon6:c.G420A:p.Q140Q	Score=675;Name=lod=737	NA	11q14.2	NA	NA	NA	NA	rs592297	0.79	0.79	0.795	0.788738	0.8171	0.6815	0.7334	0.916	0.7372	0.82	0.66	0.74	0.92	0.7861	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.690986	NA	NA	0.803725	0.893409	NA	0.899	NA	4.2597416
1226	2	233244843	233244843	G	A	intronic	ALPP	NA	NA	NA	ncRNA_intronic	ENSG00000224516	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs55977653	0.1	0.1	0.063	0.0850639	0.0736	0.2173	0.0533	0.025	0.0644	0.08	0.21	0.04	0.03	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.545021	NA	NA	NA	NA	NA	0.094	NA	4.2597333
1226	6	159192045	159192045	A	G	intronic	EZR	NA	NA	NA	intronic	ENSG00000092820	NA	NA	NA	NA	NA	6q25.3	NA	Name=Pol2-4H8	NA	NA	rs1038537	0.52	0.52	0.489	0.521565	0.7406	0.2063	0.4323	0.5635	0.6278	0.75	0.17	0.51	0.57	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.133339	NA	NA	NA	NA	NA	0.507	NA	4.2594
1226	19	40025197	40025197	T	C	intergenic	EID2B,EID2	dist=1703;dist=4250	NA	NA	ncRNA_exonic	ENSG00000269584	NA	NA	NA	NA	NA	19q13.2	NA	NA	Name=2	NA	rs7246072	0.71	0.71	0.7	0.746206	0.7406	0.6528	0.6383	0.8116	0.8364	0.75	0.6	0.69	0.78	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.340223	NA	NA	NA	NA	NA	0.681	NA	4.2594
1226	13	25541467	25541467	C	T	ncRNA_intronic	TPTE2P1	NA	NA	NA	ncRNA_exonic	ENSG00000253771	NA	NA	NA	NA	NA	13q12.13	NA	NA	NA	NA	rs2483380	0.36	0.36	0.348	0.413139	0.4076	0.3442	0.304	0.3911	0.5971	0.39	0.34	0.33	0.37	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.302973	NA	NA	NA	NA	NA	0.377	NA	4.2590666
1226	12	45410063	45410063	T	C	UTR3	DBX2	NM_001004329:c.*6A>G	NA	NA	UTR3	ENSG00000185610	ENST00000332700:c.*6A>G	NA	NA	NA	NA	12q12	NA	NA	NA	NA	rs77385942	0.02	0.02	0.01	0.00958466	0.0258	NA	0.0274	0.0023	NA	0.03	NA	0.03	NA	0.0213	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.076343	NA	NA	0.027442	0.007717	NA	0.051	NA	4.2587914
1226	2	233244777	233244777	T	C	intronic	ALPP	NA	NA	NA	ncRNA_intronic	ENSG00000224516	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs12620832	0.12	0.12	0.064	0.120607	0.0746	0.2183	0.0648	0.1505	0.0665	0.08	0.22	0.07	0.13	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.156336	NA	NA	NA	NA	NA	0.043	NA	4.2587333
1226	1	242222754	242222754	A	G	intergenic	MAP1LC3C,PLD5	dist=60369;dist=28935	NA	NA	ncRNA_exonic	ENSG00000224625	NA	NA	NA	Score=841;Name=lod=3496	NA	1q43	NA	NA	NA	NA	rs871766	0.68	0.68	0.653	0.673323	0.7416	0.7381	0.6643	0.4758	0.8098	0.76	0.75	0.69	0.48	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.511635	NA	NA	NA	NA	NA	0.696	NA	4.2584
1226	11	49400965	49400965	T	C	intergenic	FOLH1,LOC440040	dist=170743;dist=179115	NA	NA	ncRNA_exonic	ENSG00000255532	NA	NA	NA	Score=527;Name=lod=184	NA	11p11.12	NA	NA	NA	NA	rs3974576	0.67	0.67	0.645	0.721046	0.7416	0.7222	0.8156	0.5908	0.8078	0.71	0.69	0.79	0.51	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.20341	NA	NA	NA	NA	NA	0.609	NA	4.2584
1226	19	10218332	10218332	A	G	ncRNA_exonic	SNORD105	NA	NA	NA	ncRNA_exonic	ENSG00000209645	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs2305789	0.19	0.19	0.179	0.188698	0.1213	0.3423	0.17	0.1135	0.2147	0.11	0.35	0.16	0.13	0.1649	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.069687	NA	NA	0.122558	0.116205	ID=COSN165717;OCCURENCE=1(breast)	0.08	NA	4.2579086
1226	3	195395379	195395379	T	G	ncRNA_intronic	SDHAP2	NA	NA	NA	ncRNA_intronic	ENSG00000215837,ENSG00000242086	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs73216381	NA	NA	0.341	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4088	0.087	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.14062	NA	NA	NA	NA	NA	0.109	NA	4.2578666
1226	15	75094881	75094881	C	T	UTR3	CSK	NM_004383:c.*27C>T,NM_001127190:c.*27C>T	NA	NA	UTR3	ENSG00000103653	ENST00000220003:c.*27C>T,ENST00000439220:c.*27C>T,ENST00000567571:c.*27C>T,ENST00000309470:c.*27C>T	NA	NA	NA	NA	15q24.1	NA	NA	NA	NA	rs11553762	0.03	0.03	0.022	0.0313498	0.0219	0.0774	0.0231	0.0008	0.0409	0.03	0.07	0.03	0.002	0.0345	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.344069	NA	NA	0.019088	0.005234	NA	0.022	NA	4.2578454
1226	3	132345723	132345723	T	C	ncRNA_intronic	NPHP3-ACAD11	NA	NA	NA	intronic	ENSG00000113971,ENSG00000240303	NA	NA	NA	NA	NA	3q22.1	NA	NA	NA	NA	rs78240150	0.04	0.04	0.042	0.0389377	0.0755	NA	0.0562	0.003	0.0777	0.08	NA	0.06	0.01	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.527602	1.527602	NA	NA	NA	NA	0.036	NA	4.2578333
1226	17	39779160	39779160	G	C	intronic	KRT17	NA	NA	NA	intronic	ENSG00000128422,ENSG00000173801	NA	NA	NA	NA	NA	17q21.2	NA	NA	Name=3	NA	rs9916519	0.33	0.33	0.349	NA	NA	NA	NA	NA	NA	0.37	0.0035	0.3	0.66	0.3443	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.108081	NA	NA	0.398	0.64503	NA	0.413	NA	4.2577
1226	8	125154630	125154630	G	A	intergenic	FER1L6,TMEM65	dist=22328;dist=168529	NA	NA	ncRNA_exonic	ENSG00000250727	NA	NA	NA	Score=632;Name=lod=494	NA	8q24.13	NA	NA	NA	NA	rs4871463	0.58	0.58	0.582	0.549521	0.7425	0.3839	0.5101	0.5189	0.591	0.74	0.42	0.57	0.51	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.203196	NA	NA	NA	NA	NA	0.652	NA	4.2575
1226	22	22707473	22707473	C	G	intergenic	LOC96610,ZNF280B	dist=30149;dist=131299	NA	NA	exonic	ENSG00000211647	NA	nonsynonymous SNV	ENSG00000211647:ENST00000390293:exon2:c.C61G:p.P21A	NA	NA	22q11.22	NA	NA	NA	NA	rs74549497	0.17	0.17	0.149	0.195887	0.2217	0.2024	0.1585	0.1785	0.2127	0.2	0.17	0.13	0.16	0.2007	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.467527	NA	0.8	0.153455	0.148662	NA	0.051	NA	4.2574784
1226	2	233244703	233244703	T	C	intronic	ALPP	NA	NA	NA	ncRNA_intronic	ENSG00000224516	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs12620827	0.09	0.09	0.052	0.0890575	0.0765	0.2173	0.0533	0.0378	0.0644	0.08	0.19	0.05	0.03	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.223783	NA	NA	NA	NA	NA	0.138	NA	4.2568333
1226	5	178409827	178409827	C	T	intronic	GRM6	NA	NA	NA	ncRNA_intronic	ENSG00000254035	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs17078865	0.12	0.12	0.125	0.113219	0.0765	0.1161	0.0663	0.2186	0.0389	0.07	0.11	0.08	0.23	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.761522	NA	NA	NA	NA	NA	0.123	NA	4.2568333
1226	22	51015557	51015557	C	T	ncRNA_intronic	CHKB-CPT1B	NA	NA	NA	intronic	ENSG00000205560,ENSG00000254413	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs3752393	0.23	0.23	0.202	0.253594	0.0765	0.4891	0.2579	0.1558	0.3221	0.08	0.5	0.21	0.16	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.374964	NA	NA	NA	NA	NA	0.232	NA	4.2568333
1226	16	30410445	30410445	C	T	UTR3	ZNF48	NM_001214906:c.*17C>T,NM_001214907:c.*17C>T,NM_001214909:c.*17C>T,NM_152652:c.*17C>T	NA	NA	UTR3	ENSG00000180035	ENST00000320159:c.*17C>T	NA	NA	Score=343;Name=lod=33	NA	16p11.2	NA	NA	Name=3	NA	rs4788413	0.82	0.82	0.811	0.81869	0.672	0.9127	0.7939	0.9349	0.7331	0.69	0.91	0.79	0.92	0.7295	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.678416	NA	NA	0.675006	0.893753	NA	0.725	NA	4.2568274
1226	2	17466075	17466075	A	G	intergenic	FAM49A,RAD51AP2	dist=618941;dist=225911	NA	NA	ncRNA_exonic	ENSG00000214843	NA	NA	NA	Score=682;Name=lod=786	NA	2p24.2	NA	NA	NA	NA	rs10208884	0.61	0.61	0.63	0.638379	0.7435	0.124	0.5836	0.9486	0.68	0.74	0.13	0.64	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.745121	NA	NA	NA	NA	NA	0.652	NA	4.2565
1226	8	125154295	125154295	C	A	intergenic	FER1L6,TMEM65	dist=21993;dist=168864	NA	NA	ncRNA_exonic	ENSG00000250727	NA	NA	NA	Score=626;Name=lod=468	NA	8q24.13	NA	NA	NA	NA	rs13251319	0.59	0.59	0.591	0.576877	0.7435	0.3849	0.5216	0.6142	0.592	0.74	0.42	0.58	0.59	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.563819	NA	NA	NA	NA	NA	0.688	NA	4.2565
1226	8	125154360	125154360	C	T	intergenic	FER1L6,TMEM65	dist=22058;dist=168799	NA	NA	ncRNA_exonic	ENSG00000250727	NA	NA	NA	Score=626;Name=lod=468	NA	8q24.13	NA	NA	NA	NA	rs13251598	0.59	0.59	0.611	0.576478	0.7435	0.3839	0.5216	0.6142	0.591	0.74	0.42	0.58	0.59	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.170248	NA	NA	NA	NA	NA	0.688	NA	4.2565
1226	8	125154459	125154459	G	A	intergenic	FER1L6,TMEM65	dist=22157;dist=168700	NA	NA	ncRNA_exonic	ENSG00000250727	NA	NA	NA	Score=514;Name=lod=163	NA	8q24.13	NA	NA	NA	NA	rs13252427	0.6	0.6	0.601	0.576877	0.7435	0.3839	0.5216	0.6157	0.591	0.74	0.42	0.58	0.59	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.934829	NA	NA	NA	NA	NA	0.696	NA	4.2565
1226	8	125155194	125155194	C	T	intergenic	FER1L6,TMEM65	dist=22892;dist=167965	NA	NA	ncRNA_exonic	ENSG00000250727	NA	NA	NA	Score=637;Name=lod=518	NA	8q24.13	NA	NA	NA	NA	rs4437631	0.6	0.6	0.6	0.582867	0.7435	0.3839	0.5259	0.6362	0.591	0.74	0.42	0.58	0.61	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.460785	NA	NA	NA	NA	NA	0.688	NA	4.2565
1226	8	125155412	125155412	G	A	intergenic	FER1L6,TMEM65	dist=23110;dist=167747	NA	NA	ncRNA_exonic	ENSG00000250727	NA	NA	NA	Score=533;Name=lod=196	NA	8q24.13	NA	NA	NA	NA	rs7010277	0.59	0.59	0.6	0.577276	0.7435	0.3839	0.5216	0.6142	0.5951	0.74	0.42	0.58	0.59	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.825198	NA	NA	NA	NA	NA	0.688	NA	4.2565
1226	8	125155635	125155635	G	A	intergenic	FER1L6,TMEM65	dist=23333;dist=167524	NA	NA	ncRNA_exonic	ENSG00000250727	NA	NA	NA	Score=431;Name=lod=75	NA	8q24.13	NA	NA	NA	NA	rs4454257	0.59	0.59	0.586	0.577276	0.7435	0.3839	0.5216	0.6142	0.5951	0.74	0.42	0.58	0.59	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.522187	NA	NA	NA	NA	NA	0.688	NA	4.2565
1226	2	89309762	89309762	T	G	intergenic	MIR4436A,NONE	dist=197794;dist=NONE	NA	NA	exonic	ENSG00000241755	NA	nonsynonymous SNV	ENSG00000241755:ENST00000493819:exon2:c.A68C:p.D23A	NA	NA	2p11.2	NA	NA	NA	NA	rs77800356	0.24	0.24	0.21	0.290935	0.166	0.4117	0.2911	0.2648	0.3303	0.14	0.41	0.22	0.22	0.2303	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.155983	NA	0.1	0.180931	0.262936	ID=COSN166178;OCCURENCE=1(NS)	0.101	NA	4.2561024
1226	15	42041712	42041712	G	A	exonic	MGA	NA	synonymous SNV	MGA:NM_001080541:exon16:c.G5280A:p.K1760K,MGA:NM_001164273:exon17:c.G5907A:p.K1969K	exonic	ENSG00000174197	NA	synonymous SNV	ENSG00000174197:ENST00000566586:exon15:c.G5280A:p.K1760K,ENSG00000174197:ENST00000545763:exon16:c.G5280A:p.K1760K,ENSG00000174197:ENST00000570161:exon16:c.G5907A:p.K1969K,ENSG00000174197:ENST00000219905:exon17:c.G5907A:p.K1969K,ENSG00000174197:ENST00000389936:exon18:c.G5790A:p.K1930K	Score=617;Name=lod=430	NA	15q15.1	NA	NA	NA	NA	rs2695163	0.73	0.73	0.705	0.700879	0.8161	0.8909	0.8055	0.3699	0.7597	0.82	0.88	0.79	0.38	0.784	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.027832	NA	NA	0.810719	0.449465	NA	0.616	NA	4.2558476
1226	11	116718366	116718366	C	G	intronic	SIK3	NA	NA	NA	ncRNA_intronic	ENSG00000235910	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs628418	0.07	0.07	0.058	0.0752796	0.0209	0.0794	0.0533	0.1536	0.0368	0.02	0.07	0.05	0.17	0.0362	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.398245	NA	NA	0.020387	0.150159	NA	0.08	NA	4.2558463
1226	12	85388985	85388985	A	C	intergenic	SLC6A15,TSPAN19	dist=82377;dist=19109	NA	NA	intergenic	ENSG00000258073,ENSG00000231738	dist=55538;dist=19109	NA	NA	NA	NA	12q21.31	NA	NA	Name=4	NA	rs73180533	0.04	0.04	0.035	0.0405351	0.0775	0.001	0.0432	0.0151	0.0757	0.08	0.0017	0.06	0.02	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.283876	NA	NA	NA	NA	NA	0.094	NA	4.2558334
1226	1	95367649	95367649	T	C	intronic	CNN3	NA	NA	NA	intronic	ENSG00000117519	NA	NA	NA	NA	NA	1p21.3	NA	Name=KAP1,CEBPB	Name=19	NA	rs859058	0.49	0.49	0.449	0.441094	0.6034	0.4196	0.513	0.2784	0.4652	0.6	0.45	0.56	0.32	0.5402	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.686322	NA	NA	0.600581	0.333409	NA	0.428	NA	4.255819
1226	19	41313202	41313202	C	A	ncRNA_intronic	RAB4B-EGLN2	NA	NA	NA	intronic	ENSG00000171570,ENSG00000268797,ENSG00000269858	NA	NA	NA	NA	NA	19q13.2	NA	Name=Pol2-4H8	NA	NA	rs3736329	0.3	0.3	0.245	0.296526	0.3628	0.3423	0.4914	0.0234	0.4121	0.37	0.36	0.43	0.04	0.3462	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.656325	NA	NA	0.369186	0.07399	NA	0.29	NA	4.2551473
1227	12	21716055	21716055	A	C	intronic	GYS2	NA	NA	NA	intronic	ENSG00000111713	NA	NA	NA	NA	NA	12p12.1	NA	Name=SP1,TCF4,GR,FOXA2_(SC-6554),FOXA1_(SC-101058),FOXA1_(C-20),FOSL2,HDAC2_(SC-6296)	NA	NA	rs1473422	0.73	0.73	0.73	0.72504	0.7455	0.7629	0.7435	0.6104	0.8067	0.76	0.77	0.73	0.64	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.731591	NA	NA	NA	NA	NA	0.601	NA	4.2545
1227	12	21716098	21716098	T	C	intronic	GYS2	NA	NA	NA	intronic	ENSG00000111713	NA	NA	NA	NA	NA	12p12.1	NA	Name=GR,FOXA2_(SC-6554),FOXA1_(SC-101058),SP1,TCF4,FOXA1_(C-20),HDAC2_(SC-6296)	NA	NA	rs1473423	0.73	0.73	0.714	0.72504	0.7455	0.7629	0.7435	0.6104	0.8067	0.76	0.77	0.73	0.64	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.665657	NA	NA	NA	NA	NA	0.587	NA	4.2545
1227	17	48016501	48016501	T	C	intergenic	FLJ45513,DLX4	dist=90302;dist=30061	NA	NA	ncRNA_exonic	ENSG00000249176	NA	NA	NA	Score=659;Name=lod=634	NA	17q21.33	NA	NA	NA	NA	rs182109	0.61	0.61	0.62	0.589657	0.7455	0.38	0.5749	0.6611	0.5593	0.75	0.42	0.62	0.62	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.237154	NA	NA	NA	NA	NA	0.638	NA	4.2545
1227	9	4544721	4544721	A	T	intronic	SLC1A1	NA	NA	NA	intronic	ENSG00000106688	NA	NA	NA	Score=640;Name=lod=534	NA	9p24.2	NA	NA	NA	NA	rs45518336	0.22	0.22	0.189	0.222244	0.2416	0.2341	0.1686	0.1415	0.3374	0.25	0.23	0.19	0.18	0.2512	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.825153	1.825153	NA	0.252791	0.16069	NA	0.145	NA	4.254409
1227	7	142326607	142326607	C	T	intergenic	LOC730441,MTRNR2L6	dist=354539;dist=47524	NA	NA	exonic	ENSG00000211746	NA	nonsynonymous SNV	ENSG00000211746:ENST00000390393:exon1:c.C37T:p.L13F	Score=309;Name=lod=24	NA	7q34	NA	NA	NA	NA	rs17260	0.48	0.48	0.435	0.425919	0.5487	0.6796	0.3184	0.1551	0.4806	0.56	0.67	0.38	0.19	0.4969	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.367201	2.367201	0.55	0.533398	0.192431	NA	0.406	NA	4.2543354
1227	7	107592403	107592403	G	A	intronic	LAMB1	NA	NA	NA	intronic	ENSG00000091136	NA	NA	NA	NA	NA	7q31.1	NA	Name=ERalpha_a,AP-2alpha,c-Myc,AP-2gamma,CEBPB	NA	NA	rs2072210	0.38	0.38	0.385	0.391773	0.2237	0.4772	0.2795	0.5794	0.3027	0.22	0.5	0.25	0.59	0.2937	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.104355	NA	NA	0.228658	0.508636	NA	0.442	NA	4.253942
1227	19	21838785	21838785	C	T	intergenic	ZNF429,ZNF100	dist=117706;dist=68058	NA	NA	ncRNA_exonic	ENSG00000268278	NA	NA	NA	NA	NA	19p12	NA	Name=KAP1,ZNF274	NA	NA	rs10422946	0.64	0.64	0.609	0.624002	0.7465	0.7202	0.7233	0.3601	0.6851	0.73	0.7	0.73	0.38	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.420314	NA	NA	NA	NA	NA	0.725	NA	4.2535
1227	2	89292401	89292401	T	C	intergenic	MIR4436A,NONE	dist=180433;dist=NONE	NA	NA	UTR5	ENSG00000240671	ENST00000495489:c.-4A>G	NA	NA	NA	NA	2p11.2	NA	Name=Pol2	NA	NA	rs143871003	0.28	0.28	0.2	0.270367	0.168	0.4097	0.2738	0.1936	0.3333	0.16	0.46	0.25	0.27	0.2256	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.173126	NA	NA	0.186784	0.188947	ID=COSN166173;OCCURENCE=1(breast)	0.065	NA	4.2529494
1227	19	53321259	53321259	G	A	UTR5	ZNF28	NM_006969:c.-48C>T	NA	NA	UTR5	ENSG00000198538	ENST00000457749:c.-48C>T,ENST00000414252:c.-16321C>T,ENST00000391783:c.-16321C>T,ENST00000596559:c.-48C>T,ENST00000594602:c.-48C>T	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs112424230	0.05	0.05	0.048	0.0547125	0.0398	0.004	0.0504	0.1331	0.0194	0.05	0.0035	0.06	0.11	0.0412	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.840506	NA	NA	NA	NA	NA	0.065	NA	4.2523334
1227	17	73488794	73488794	C	T	exonic	KIAA0195	NA	synonymous SNV	KIAA0195:NM_014738:exon15:c.C1836T:p.I612I	exonic	ENSG00000177728	NA	synonymous SNV	ENSG00000177728:ENST00000580918:exon4:c.C720T:p.I240I,ENSG00000177728:ENST00000579208:exon7:c.C789T:p.I263I,ENSG00000177728:ENST00000375248:exon14:c.C1866T:p.I622I,ENSG00000177728:ENST00000314256:exon15:c.C1836T:p.I612I	Score=548;Name=lod=225	NA	17q25.1	NA	NA	NA	NA	rs4078259	0.65	0.65	0.646	0.635783	0.8151	0.4673	0.5706	0.5257	0.82	0.84	0.47	0.64	0.59	0.7554	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.318724	1.318724	NA	0.844302	0.564004	NA	0.775	NA	4.2518646
1227	16	56667785	56667785	T	C	UTR3	MT1M	NM_176870:c.*31T>C	NA	NA	UTR3	ENSG00000205364	ENST00000379818:c.*31T>C	NA	NA	NA	NA	16q12.2	NA	NA	NA	NA	rs9936741	0.09	0.09	0.083	0.0884585	0.0229	0.1052	0.0432	0.1997	0.0204	0.03	0.09	0.04	0.2	0.0387	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.798042	NA	NA	0.019884	0.140582	NA	0.101	NA	4.2518494
1227	2	7179961	7179961	C	T	UTR3	RNF144A	NM_014746:c.*70C>T	NA	NA	UTR3	ENSG00000151692	ENST00000320892:c.*70C>T	NA	NA	NA	NA	2p25.1	NA	NA	NA	NA	rs72783732	0.04	0.04	0.04	0.0593051	0.0815	0.003	0.0432	0.0363	0.137	0.08	0.0017	0.04	0.03	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.371546	NA	NA	NA	NA	NA	0.116	NA	4.2518334
1227	9	100849465	100849465	G	A	UTR3	TRIM14	NM_014788:c.*287C>T	NA	NA	UTR3	ENSG00000106785	ENST00000341469:c.*287C>T,ENST00000538344:c.*287C>T	NA	NA	NA	NA	9q22.33	NA	NA	NA	NA	rs10984980	0.11	0.11	0.085	0.086861	0.0815	0.251	0.0548	0.0045	0.0573	0.09	0.26	0.07	0.0041	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.246816	NA	NA	NA	NA	NA	0.029	NA	4.2518334
1227	16	70287177	70287177	A	G	exonic	AARS	NA	synonymous SNV	AARS:NM_001605:exon20:c.T2715C:p.V905V	exonic	ENSG00000090861	NA	synonymous SNV	ENSG00000090861:ENST00000261772:exon20:c.T2715C:p.V905V	Score=483;Name=lod=123	NA	16q22.1	NA	NA	NA	NA	rs4081753	0.88	0.88	0.874	0.88119	0.7972	0.9663	0.7795	0.9894	0.8057	0.78	0.96	0.81	0.98	0.8241	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.513173	NA	NA	0.793721	0.957689	ID=COSM435653;OCCURENCE=1(breast)	0.833	NA	4.2516456
1227	13	19713615	19713615	A	C	intergenic	LINC00442,RNU6-52P	dist=126841;dist=3507	NA	NA	ncRNA_exonic	ENSG00000224778	NA	NA	NA	Score=393;Name=lod=53	NA	13q12.11	NA	NA	NA	NA	rs9511772	0.7	0.7	0.703	0.68151	0.7485	0.5962	0.6988	0.6921	0.6738	0.75	0.59	0.72	0.72	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.658152	NA	NA	NA	NA	NA	0.71	NA	4.2515
1227	13	19713634	19713634	G	A	intergenic	LINC00442,RNU6-52P	dist=126860;dist=3488	NA	NA	ncRNA_exonic	ENSG00000224778	NA	NA	NA	Score=393;Name=lod=53	NA	13q12.11	NA	NA	NA	NA	rs9511773	0.7	0.7	0.7	0.68151	0.7485	0.5962	0.6988	0.6921	0.6738	0.75	0.59	0.72	0.72	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.654165	NA	NA	NA	NA	NA	0.71	NA	4.2515
1227	13	19713714	19713714	C	T	intergenic	LINC00442,RNU6-52P	dist=126940;dist=3408	NA	NA	ncRNA_exonic	ENSG00000224778	NA	NA	NA	Score=393;Name=lod=53	NA	13q12.11	NA	NA	NA	NA	rs9511774	0.7	0.7	0.709	0.68151	0.7485	0.5962	0.6988	0.6921	0.6738	0.75	0.59	0.72	0.72	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.380112	NA	NA	NA	NA	NA	0.71	NA	4.2515
1227	19	57802024	57802024	G	A	intronic	ZNF460	NA	NA	NA	intronic	ENSG00000197714	NA	NA	NA	NA	NA	19q13.43	NA	NA	Name=3	NA	rs45619736	0.2	0.2	0.172	0.186701	0.2535	0.1657	0.3084	0.0983	0.1728	0.26	0.16	0.28	0.09	0.2482	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.673062	NA	NA	0.246905	0.1196	NA	0.152	NA	4.251395
1227	5	135392507	135392507	G	A	intronic	TGFBI	NA	NA	NA	intronic	ENSG00000120708	NA	NA	NA	NA	NA	5q31.1	NA	NA	Name=3	NA	rs2072239	0.18	0.18	0.163	0.195288	0.2256	0.1984	0.2983	0.0106	0.3374	0.23	0.22	0.26	0.01	0.2836	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.98034	NA	NA	0.239447	0.04784	NA	0.123	NA	4.251353
1227	3	129821465	129821465	C	T	ncRNA_intronic	FAM86HP	NA	NA	NA	ncRNA_intronic	ENSG00000251287,ENSG00000253540	NA	NA	NA	NA	NA	3q22.1	NA	NA	NA	NA	rs75630148	0.26	0.26	0.156	0.265575	0.4155	0.1835	0.3487	0.1021	0.3579	0.38	0.16	0.38	0.09	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.569227	NA	NA	NA	NA	NA	0.087	NA	4.2511666
1227	6	11306381	11306381	T	C	UTR5	NEDD9	NM_001142393:c.-145A>G	NA	NA	UTR5	ENSG00000111859	ENST00000448183:c.-145A>G,ENST00000504387:c.-145A>G,ENST00000513989:c.-92427A>G,ENST00000397378:c.-145A>G,ENST00000508546:c.-56950A>G	NA	NA	NA	NA	6p24.2	NA	NA	NA	NA	rs16871239	0.07	0.07	0.058	0.0589058	0.0825	NA	0.147	0.0628	0.0276	0.08	NA	0.15	0.08	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.505016	1.505016	NA	NA	NA	NA	0.109	NA	4.2508334
1227	19	35616086	35616086	C	T	UTR3	LGI4	NM_139284:c.*11G>A	NA	NA	UTR3	ENSG00000153902	ENST00000392225:c.*217G>A,ENST00000310123:c.*11G>A,ENST00000587780:c.*986G>A	NA	NA	NA	NA	19q13.12	NA	Name=Pol2	NA	NA	rs11084800	0.31	0.31	0.309	0.360024	0.3698	0.2669	0.2493	0.3132	0.5879	0.38	0.24	0.23	0.34	0.3565	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.579026	NA	NA	0.356395	0.331139	NA	0.362	NA	4.2506384
1227	19	19023853	19023853	T	C	exonic	COPE	NA	synonymous SNV	COPE:NM_007263:exon2:c.A129G:p.L43L,COPE:NM_199442:exon2:c.A129G:p.L43L,COPE:NM_199444:exon2:c.A129G:p.L43L	exonic	ENSG00000105669	NA	synonymous SNV	ENSG00000105669:ENST00000262812:exon2:c.A129G:p.L43L,ENSG00000105669:ENST00000349893:exon2:c.A129G:p.L43L,ENSG00000105669:ENST00000351079:exon2:c.A129G:p.L43L,ENSG00000105669:ENST00000593827:exon2:c.A129G:p.L43L,ENSG00000105669:ENST00000600932:exon2:c.A129G:p.L43L	NA	NA	19p13.11	NA	NA	NA	NA	rs3177137	0.38	0.38	0.358	0.35004	0.4871	0.1925	0.5836	0.3222	0.2434	0.47	0.19	0.58	0.33	0.4445	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.607467	NA	NA	0.484651	0.361779	ID=COSM1178458;OCCURENCE=1(prostate)	0.333	NA	4.2504156
1227	5	43505993	43505993	A	G	exonic	C5orf34	NA	synonymous SNV	C5orf34:NM_198566:exon4:c.T789C:p.N263N	exonic	ENSG00000172244	NA	synonymous SNV	ENSG00000172244:ENST00000509489:exon2:c.T447C:p.N149N,ENSG00000172244:ENST00000306862:exon4:c.T789C:p.N263N	NA	NA	5p12	NA	NA	NA	NA	rs7710628	0.4	0.4	0.407	0.401957	0.503	0.0893	0.3818	0.6271	0.3303	0.48	0.09	0.43	0.63	0.4254	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.309421	NA	NA	0.487907	0.590785	NA	0.543	NA	4.2503596
1227	X	48163148	48163148	A	G	ncRNA_intronic	SSX9	NA	NA	NA	intronic	ENSG00000204648	NA	NA	NA	NA	NA	Xp11.23	NA	NA	NA	NA	rs149559713	0.05	0.05	0.03577	NA	NA	NA	NA	NA	NA	0.03	0.08	0.11	0.01	0.0425	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.625717	NA	NA	0.040583	0.008605	ID=COSN168738;OCCURENCE=1(large_intestine)	NA	NA	4.2502503
1227	3	63466382	63466382	G	T	ncRNA_intronic	SYNPR-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000241359	NA	NA	NA	NA	NA	3p14.2	NA	NA	NA	NA	rs6772726	0.41	0.41	0.387	0.419928	0.4165	0.4683	0.4352	0.4153	0.3691	0.42	0.45	0.4	0.37	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.16746	NA	NA	NA	NA	NA	0.377	NA	4.2501666
1227	3	129822494	129822494	C	T	ncRNA_intronic	FAM86HP	NA	NA	NA	ncRNA_intronic	ENSG00000251287,ENSG00000253540	NA	NA	NA	NA	NA	3q22.1	NA	NA	NA	NA	rs9713334	0.28	0.28	0.202	0.288139	0.4165	0.248	0.3559	0.1362	0.3548	0.39	0.21	0.38	0.13	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.323406	NA	NA	NA	NA	NA	NA	NA	4.2501666
1227	3	129826002	129826002	G	T	ncRNA_intronic	FAM86HP	NA	NA	NA	ncRNA_intronic	ENSG00000251287,ENSG00000253540	NA	NA	NA	NA	NA	3q22.1	NA	NA	NA	NA	rs7428346	0.3	0.3	0.255	0.306909	0.4165	0.248	0.3602	0.2035	0.3569	0.4	0.22	0.39	0.18	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.059656	NA	NA	NA	NA	NA	0.29	NA	4.2501666
1227	14	64898459	64898459	A	G	intronic	MTHFD1	NA	NA	NA	ncRNA_intronic	ENSG00000258824	NA	NA	NA	NA	NA	14q23.3	NA	NA	NA	NA	rs60806768	0.05	0.05	0.054	0.0593051	0.0229	0.0139	0.0288	0.1747	0.0092	0.02	0.01	0.02	0.15	0.0358	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.574244	NA	NA	0.024767	0.1532	NA	0.072	NA	4.2498663
1227	14	64898463	64898463	G	A	intronic	MTHFD1	NA	NA	NA	ncRNA_intronic	ENSG00000258824	NA	NA	NA	NA	NA	14q23.3	NA	NA	NA	NA	rs59770063	0.05	0.05	0.054	0.0593051	0.0229	0.0139	0.0288	0.1747	0.0092	0.02	0.01	0.02	0.15	0.0358	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.35096	NA	NA	0.024767	0.1532	NA	0.072	NA	4.2498663
1227	22	36007075	36007075	C	T	exonic	MB	NA	synonymous SNV	MB:NM_005368:exon2:c.G174A:p.A58A,MB:NM_203377:exon3:c.G174A:p.A58A,MB:NM_203378:exon3:c.G174A:p.A58A	exonic	ENSG00000198125	NA	synonymous SNV	ENSG00000198125:ENST00000397326:exon2:c.G174A:p.A58A,ENSG00000198125:ENST00000401702:exon2:c.G9A:p.A3A,ENSG00000198125:ENST00000442617:exon2:c.G9A:p.A3A,ENSG00000198125:ENST00000359787:exon3:c.G174A:p.A58A,ENSG00000198125:ENST00000397328:exon3:c.G174A:p.A58A,ENSG00000198125:ENST00000406324:exon3:c.G174A:p.A58A,ENSG00000198125:ENST00000443033:exon3:c.G174A:p.A58A,ENSG00000198125:ENST00000451685:exon3:c.G174A:p.A58A,ENSG00000198125:ENST00000419229:exon4:c.G174A:p.A58A,ENSG00000198125:ENST00000447607:exon4:c.G174A:p.A58A	NA	NA	22q12.3	NA	NA	NA	NA	rs7293	0.53	0.53	0.528	0.53095	0.4483	0.747	0.4712	0.4501	0.545	0.44	0.73	0.46	0.48	0.5019	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.818377	NA	NA	0.466977	0.448025	ID=COSM1416001,COSM1416000;OCCURENCE=1(large_intestine)	0.457	NA	4.2494896
1227	11	73106088	73106088	C	G	intronic	RELT	NA	NA	NA	intronic	ENSG00000054967	NA	NA	NA	NA	NA	11q13.4	NA	NA	Name=2	NA	rs28641751	0.28	0.28	0.264	0.28774	0.2435	0.0397	0.183	0.6914	0.1176	0.25	0.04	0.18	0.66	0.2551	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.122528	NA	NA	0.251922	0.590909	NA	0.355	NA	4.249478
1227	3	129822492	129822492	G	A	ncRNA_intronic	FAM86HP	NA	NA	NA	ncRNA_intronic	ENSG00000251287,ENSG00000253540	NA	NA	NA	NA	NA	3q22.1	NA	NA	NA	NA	rs9713340	0.29	0.29	0.224	0.302915	0.4175	0.248	0.3588	0.1899	0.3548	0.39	0.2	0.38	0.19	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.54106	NA	NA	NA	NA	NA	0.022	NA	4.2491666
1227	3	129822552	129822552	G	A	ncRNA_intronic	FAM86HP	NA	NA	NA	ncRNA_intronic	ENSG00000251287,ENSG00000253540	NA	NA	NA	NA	NA	3q22.1	NA	NA	NA	NA	rs9713344	0.31	0.31	0.208	0.310903	0.4175	0.248	0.3646	0.2171	0.3548	0.4	0.21	0.39	0.21	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.476125	NA	NA	NA	NA	NA	0.029	NA	4.2491666
1227	1	210014093	210014093	A	T	intronic	DIEXF	NA	NA	NA	intronic	ENSG00000117597	NA	NA	NA	NA	NA	1q32.2	NA	NA	Name=17	NA	rs654470	0.81	0.81	0.815	0.817692	0.7515	0.8016	0.7579	0.9523	0.7628	0.75	0.8	0.79	0.95	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.181559	NA	NA	NA	NA	NA	0.877	NA	4.2485
1227	7	56665688	56665688	C	G	intergenic	DKFZp434L192,LOC100130849	dist=100711;dist=277390	NA	NA	ncRNA_exonic	ENSG00000213067	NA	NA	NA	Score=756;Name=lod=1579	NA	7p11.2	NA	NA	NA	NA	rs4470985	0.7	0.7	0.679	0.711462	0.7515	0.5942	0.7363	0.7481	0.7239	0.75	0.59	0.72	0.75	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.399048	NA	NA	NA	NA	NA	0.761	NA	4.2485
1227	13	77559950	77559950	A	G	intergenic	IRG1,CLN5	dist=27174;dist=6109	NA	NA	ncRNA_exonic	ENSG00000228002	NA	NA	NA	Score=666;Name=lod=678	NA	13q22.3	NA	NA	NA	NA	rs389644	0.68	0.68	0.681	0.627796	0.7515	0.4851	0.6499	0.7776	0.4294	0.75	0.51	0.7	0.75	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.710787	NA	NA	NA	NA	NA	0.667	NA	4.2485
1227	13	77560008	77560008	T	C	intergenic	IRG1,CLN5	dist=27232;dist=6051	NA	NA	ncRNA_exonic	ENSG00000228002	NA	NA	NA	Score=666;Name=lod=678	NA	13q22.3	NA	NA	NA	NA	rs392121	0.68	0.68	0.682	0.627796	0.7515	0.4851	0.6499	0.7776	0.4294	0.75	0.51	0.7	0.75	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.276931	NA	NA	NA	NA	NA	0.667	NA	4.2485
1227	12	103271350	103271350	G	A	intronic	PAH	NA	NA	NA	intronic	ENSG00000171759	NA	NA	NA	NA	NA	12q23.2	NA	NA	NA	NA	rs2037639	0.32	0.32	0.334	0.316494	0.2445	0.7004	0.1744	0.1203	0.3609	0.25	0.71	0.17	0.09	0.2761	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.555346	NA	NA	0.23093	0.13005	NA	0.37	CLINSIG=untested;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000088901.1;CLNDSDB=.;CLNDSDBID=.	4.24847
1227	14	20876621	20876621	G	A	UTR5	TEP1	NM_007110:c.-23C>T	NA	NA	UTR5	ENSG00000129566	ENST00000262715:c.-23C>T,ENST00000556935:c.-23C>T,ENST00000555727:c.-23C>T,ENST00000556549:c.-23C>T	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs41301453	0.02	0.02	0.02	0.0269569	0.0268	NA	0.0187	0.059	0.0174	0.03	NA	0.02	0.04	0.0285	0.065	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.329311	NA	NA	0.03	0.064458	NA	NA	NA	4.2480334
1227	19	8411366	8411366	C	G	intergenic	KANK3,ANGPTL4	dist=3220;dist=17645	NA	NA	upstream	ENSG00000265364,ENSG00000268884	NA	NA	NA	NA	NA	19p13.2	NA	NA	Name=2	NA	rs55774284	0.19	0.19	0.168	0.154153	0.2525	0.1379	0.3833	0.0159	0.0941	0.25	0.15	0.35	0.02	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.505748	2.505748	NA	NA	NA	NA	0.232	NA	4.2475
1227	21	38126507	38126507	T	C	UTR3	HLCS	NM_001242785:c.*40A>G,NM_000411:c.*40A>G,NM_001242784:c.*40A>G	NA	NA	UTR3	ENSG00000159267	ENST00000336648:c.*40A>G,ENST00000399120:c.*40A>G	NA	NA	NA	NA	21q22.13	NA	NA	NA	NA	rs77014096	0.02	0.02	0.024	0.0235623	0.0308	0.0486	0.0288	0.0015	0.0164	0.02	0.04	0.03	0.002	0.0278	0.054	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.03184	NA	NA	0.027254	0.006585	NA	0.036	NA	4.2474794
1227	11	2017110	2017110	C	G	ncRNA_exonic	H19	NA	NA	NA	ncRNA_exonic	ENSG00000130600	NA	NA	NA	NA	NA	11p15.5	NA	Name=Egr-1	NA	NA	rs2839701	0.35	0.35	0.305	0.290136	0.499	0.3313	0.4092	0.0552	0.2658	0.52	0.33	0.4	0.07	0.4142	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.932308	NA	NA	0.506533	0.121143	NA	0.333	NA	4.2469336
1227	17	2200434	2200434	A	C	intronic	SMG6	NA	NA	NA	intronic	ENSG00000070366	NA	NA	NA	NA	NA	17p13.3	NA	NA	Name=6	NA	rs170043	0.83	0.83	0.837	0.834864	0.7535	0.8442	0.8156	0.9425	0.7771	0.74	0.85	0.82	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.557702	NA	NA	NA	NA	NA	0.812	NA	4.2465
1227	22	32589034	32589034	T	C	exonic	RFPL2	NA	synonymous SNV	RFPL2:NM_006605:exon1:c.A228G:p.L76L,RFPL2:NM_001159545:exon3:c.A141G:p.L47L,RFPL2:NM_001159546:exon3:c.A141G:p.L47L,RFPL2:NM_001098527:exon4:c.A411G:p.L137L	exonic	ENSG00000128253	NA	synonymous SNV	ENSG00000128253:ENST00000248980:exon1:c.A228G:p.L76L,ENSG00000128253:ENST00000248983:exon3:c.A141G:p.L47L,ENSG00000128253:ENST00000400236:exon4:c.A141G:p.L47L,ENSG00000128253:ENST00000400237:exon4:c.A411G:p.L137L	NA	NA	22q12.3	NA	NA	NA	NA	rs136479	0.44	0.44	0.436	0.472644	0.494	0.1498	0.3775	0.8207	0.3804	0.48	0.13	0.37	0.8	0.4501	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.367551	NA	NA	0.476512	0.771221	NA	0.507	NA	4.2460546
1227	1	235383188	235383188	A	G	exonic	ARID4B	NA	synonymous SNV	ARID4B:NM_001206794:exon16:c.T1503C:p.D501D,ARID4B:NM_016374:exon16:c.T1503C:p.D501D,ARID4B:NM_031371:exon16:c.T1503C:p.D501D	exonic	ENSG00000054267	NA	synonymous SNV	ENSG00000054267:ENST00000264183:exon16:c.T1503C:p.D501D,ENSG00000054267:ENST00000349213:exon16:c.T1503C:p.D501D,ENSG00000054267:ENST00000366603:exon16:c.T1503C:p.D501D,ENSG00000054267:ENST00000421364:exon16:c.T1503C:p.D501D	NA	NA	1q42.3	NA	NA	NA	NA	rs4659654	0.43	0.43	0.42	0.451478	0.4791	0.251	0.5115	0.4433	0.5982	0.49	0.27	0.51	0.46	0.4778	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.262195	NA	NA	0.463829	0.47685	ID=COSM425633;OCCURENCE=1(breast)	0.536	NA	4.2459376
1227	3	149166171	149166171	G	C	intergenic	TM4SF1,TM4SF4	dist=70603;dist=26197	NA	NA	intergenic	ENSG00000240246,ENSG00000241929	dist=15110;dist=13798	NA	NA	NA	NA	3q25.1	NA	NA	Name=98	NA	rs78373836	0.05	0.05	0.053	0.0453275	0.0875	0.0268	0.0793	0.0121	0.0419	0.1	0.02	0.06	0.01	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.165456	NA	NA	NA	NA	NA	0.08	NA	4.2458334
1227	9	130630430	130630430	A	G	intronic	AK1	NA	NA	NA	ncRNA_intronic	ENSG00000257524	NA	NA	NA	NA	NA	9q34.11	NA	NA	NA	NA	rs6478799	0.14	0.14	0.156	0.152756	0.0875	0.0645	0.0893	0.3918	0.0327	0.08	0.07	0.09	0.36	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.533984	NA	NA	NA	NA	NA	0.232	NA	4.2458333
1227	2	44497828	44497828	T	A	intergenic	PPM1B,SLC3A1	dist=36086;dist=4769	NA	NA	ncRNA_exonic	ENSG00000226972	NA	NA	NA	Score=734;Name=lod=1285	NA	2p21	NA	NA	NA	NA	rs6725676	0.62	0.62	0.646	0.653554	0.7545	0.3671	0.6455	0.6475	0.8589	0.74	0.39	0.66	0.69	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.683611	NA	NA	NA	NA	NA	0.681	NA	4.2455
1227	14	74192165	74192165	T	C	intronic	ELMSAN1	NA	NA	NA	intronic	ENSG00000156030	NA	NA	NA	NA	NA	14q24.3	NA	NA	Name=4	NA	rs10136165	0.86	0.86	0.877	0.855831	0.7545	0.9157	0.8184	0.9644	0.7781	0.73	0.95	0.83	0.96	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.952718	NA	NA	NA	NA	NA	0.855	NA	4.2455
1227	17	28511978	28511978	G	A	exonic	NSRP1	NA	synonymous SNV	NSRP1:NM_001261467:exon6:c.G801A:p.Q267Q,NSRP1:NM_032141:exon7:c.G963A:p.Q321Q	exonic	ENSG00000126653	NA	synonymous SNV	ENSG00000126653:ENST00000247026:exon7:c.G963A:p.Q321Q	NA	NA	17q11.2	NA	NA	NA	NA	rs1979572	0.59	0.59	0.598	0.58127	0.4433	0.8224	0.5634	0.5333	0.5521	0.45	0.83	0.55	0.57	0.5173	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.42634	NA	NA	0.460814	0.511575	NA	0.725	NA	4.2452526
1228	17	4936178	4936178	A	G	UTR3	SLC52A1	NM_001104577:c.*74T>C,NM_017986:c.*74T>C	NA	NA	UTR3	ENSG00000132517	ENST00000254853:c.*74T>C,ENST00000512825:c.*244T>C,ENST00000424747:c.*74T>C	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs60480329	0.14	0.14	0.136	0.159145	0.0885	0.0516	0.049	0.4584	0.0164	0.08	0.05	0.05	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.717662	NA	NA	NA	NA	NA	0.203	NA	4.2448334
1228	2	12163800	12163800	C	G	intergenic	MIR4262,TRIB2	dist=186688;dist=693198	NA	NA	ncRNA_intronic	ENSG00000224184	NA	NA	NA	Score=626;Name=lod=467	NA	2p25.1	NA	NA	NA	NA	rs4669796	0.63	0.63	0.603	0.614816	0.7555	0.6141	0.6974	0.3533	0.7658	0.77	0.6	0.7	0.39	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.033174	NA	NA	NA	NA	NA	0.616	NA	4.2445
1228	5	7302009	7302009	T	C	ncRNA_exonic	LOC442132	NA	NA	NA	ncRNA_splicing	ENSG00000205976	ENST00000512854:exon8:c.638-2A>G	NA	NA	NA	NA	5p15.31	NA	NA	NA	NA	rs16874928	0.59	0.59	0.567	0.584665	0.4225	0.8333	0.611	0.5416	0.5348	0.41	0.83	0.57	0.58	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.485852	NA	NA	NA	NA	NA	0.37	NA	4.2441666
1228	5	17491659	17491659	A	G	intergenic	LOC401177,CDH18	dist=104240;dist=1981496	NA	NA	ncRNA_exonic	ENSG00000268799	NA	NA	NA	Score=737;Name=lod=1323	NA	5p15.1	NA	NA	NA	NA	rs2459842	0.61	0.61	0.545	0.598642	0.7565	0.4474	0.6023	0.5613	0.6401	0.75	0.41	0.66	0.58	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.500655	NA	NA	NA	NA	ID=COSM449347;OCCURENCE=3(breast)	0.609	NA	4.2435
1228	3	156870816	156870816	A	G	intronic	CCNL1	NA	NA	NA	intronic	ENSG00000163660	NA	NA	NA	NA	NA	3q25.31	NA	Name=Pol2	NA	NA	rs41272613	0.27	0.27	0.227	0.23722	0.2584	0.3333	0.4741	0.0635	0.183	0.25	0.36	0.43	0.07	0.2546	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.643414	1.643414	NA	0.243721	0.100999	ID=COSM149503;OCCURENCE=1(stomach)	0.174	NA	4.243279
1228	16	77850999	77850999	A	G	intronic	VAT1L	NA	NA	NA	intronic	ENSG00000171724	NA	NA	NA	NA	NA	16q23.1	NA	NA	Name=2	NA	rs2966052	0.21	0.21	0.171	0.219449	0.2664	0.1885	0.2522	0.1203	0.3139	0.26	0.2	0.25	0.1	0.253	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.462374	1.462374	NA	0.237765	0.13351	NA	0.188	NA	4.242835
1228	4	158281371	158281371	C	G	intronic	GRIA2	NA	NA	NA	ncRNA_exonic	ENSG00000263738	NA	NA	NA	NA	NA	4q32.1	NA	NA	NA	NA	rs4438801	0.06	0.06	0.053	0.0495208	0.0915	0.005	0.0476	0.0726	0.0225	0.08	0.0017	0.06	0.08	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.319106	NA	NA	NA	NA	NA	0.022	NA	4.2418333
1228	7	98637855	98637855	C	T	intronic	SMURF1	NA	NA	NA	ncRNA_intronic	ENSG00000242687	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs998848	0.3	0.3	NA	0.29393	0.0915	0.1895	0.2176	0.7489	0.0491	0.09	0.21	0.23	0.75	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.703817	NA	NA	NA	NA	NA	0.304	NA	4.2418333
1228	4	186678161	186678161	C	T	intronic	SORBS2	NA	NA	NA	intronic	ENSG00000154556	NA	NA	NA	Score=564;Name=lod=262	NA	4q35.1	NA	NA	NA	NA	rs13130022	0.71	0.71	0.71	0.714058	0.7584	0.4871	0.7089	0.8215	0.7607	0.75	0.54	0.72	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2917	NA	NA	NA	NA	NA	0.71	NA	4.2416
1228	19	16013843	16013843	T	C	intergenic	CYP4F2,CYP4F11	dist=4959;dist=9337	NA	NA	ncRNA_exonic	ENSG00000267218	NA	NA	NA	Score=745;Name=lod=1424	NA	19p13.12	NA	NA	NA	NA	rs6512068	0.67	0.67	0.626	0.668131	0.7584	0.4315	0.6527	0.7648	0.6994	0.77	0.43	0.68	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.149894	NA	NA	NA	NA	NA	0.71	NA	4.2416
1228	4	40440215	40440215	T	C	exonic	RBM47	NA	synonymous SNV	RBM47:NM_019027:exon3:c.A696G:p.E232E,RBM47:NM_001098634:exon4:c.A696G:p.E232E	exonic	ENSG00000163694	NA	synonymous SNV	ENSG00000163694:ENST00000381793:exon3:c.A696G:p.E232E,ENSG00000163694:ENST00000381795:exon3:c.A696G:p.E232E,ENSG00000163694:ENST00000514014:exon3:c.A582G:p.E194E,ENSG00000163694:ENST00000295971:exon4:c.A696G:p.E232E,ENSG00000163694:ENST00000319592:exon4:c.A696G:p.E232E,ENSG00000163694:ENST00000510871:exon4:c.A696G:p.E232E	Score=645;Name=lod=558	NA	4p14	NA	NA	NA	NA	rs2291580	0.73	0.73	0.708	0.702476	0.8141	0.7331	0.781	0.4501	0.8415	0.82	0.77	0.78	0.53	0.7875	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.632797	NA	NA	0.823488	0.53291	ID=COSM447854,COSM447856,COSM447855;OCCURENCE=1(breast)	0.652	NA	4.2415786
1228	12	9462785	9462785	C	G	ncRNA_intronic	LOC642846	NA	NA	NA	ncRNA_intronic	ENSG00000111788	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs12580730	0.35	0.35	0.284	0.307907	0.4254	0.3948	0.317	0.1952	0.2434	0.42	0.41	0.31	0.2	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.625824	1.625824	NA	NA	NA	NA	0.058	NA	4.2412666
1228	1	200594005	200594005	C	T	intergenic	KIF14,DDX59	dist=4143;dist=19160	NA	NA	UTR3	ENSG00000118197	ENST00000447706:c.*24G>A	NA	NA	NA	NA	1q32.1	NA	NA	Name=86	NA	rs2808257	0.32	0.32	0.313	0.375399	0.1521	0.497	0.3934	0.4002	0.4335	0.15	0.49	0.33	0.4	0.2671	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.117211	NA	NA	0.172907	0.358375	NA	0.239	NA	4.2412264
1228	10	105799216	105799216	G	T	exonic	COL17A1	NA	synonymous SNV	COL17A1:NM_000494:exon43:c.C2883A:p.P961P	exonic	ENSG00000065618	NA	synonymous SNV	ENSG00000065618:ENST00000353479:exon43:c.C2883A:p.P961P	Score=486;Name=lod=126	NA	10q24.33	NA	NA	NA	NA	rs2296219	0.72	0.72	0.692	0.683506	0.8171	0.8224	0.768	0.4145	0.7065	0.81	0.85	0.78	0.4	0.7769	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.031408	NA	NA	0.831628	0.487744	NA	0.746	NA	4.2410386
1228	16	84495509	84495509	G	A	intronic	ATP2C2	NA	NA	NA	ncRNA_exonic	ENSG00000261286	NA	NA	NA	NA	NA	16q24.1	NA	NA	NA	NA	rs62050919	0.04	0.04	0.031	0.0347444	0.0924	0.0069	0.0504	0.0068	0.0307	0.08	0.0017	0.07	0.01	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.603938	NA	NA	NA	NA	NA	0.022	NA	4.2409333
1228	19	35660546	35660546	T	C	UTR3	FXYD5	NM_014164:c.*28T>C,NM_144779:c.*28T>C,NM_001164605:c.*28T>C	NA	NA	UTR3	ENSG00000089327	ENST00000392219:c.*28T>C,ENST00000592290:c.*309T>C,ENST00000590686:c.*28T>C,ENST00000541435:c.*28T>C,ENST00000342879:c.*28T>C,ENST00000588699:c.*83T>C,ENST00000423817:c.*28T>C,ENST00000392217:c.*28T>C	NA	NA	NA	NA	19q13.12	Score=920;Name=V$HOXA3_01	NA	NA	NA	rs1046294	0.3	0.3	0.277	0.304513	0.3708	0.1399	0.3127	0.3722	0.3088	0.37	0.12	0.31	0.39	0.3397	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.455303	NA	NA	0.382209	0.33182	NA	0.42	NA	4.2406244
1228	11	5411579	5411579	G	A	exonic	OR51M1	NA	synonymous SNV	OR51M1:NM_001004756:exon1:c.G951A:p.K317K	exonic	ENSG00000184698	NA	synonymous SNV	ENSG00000184698:ENST00000328611:exon1:c.G951A:p.K317K	NA	NA	11p15.4	NA	Name=CTCF	NA	NA	rs10768906	0.67	0.67	0.7	0.714457	0.8231	0.5476	0.7349	0.7383	0.728	0.78	0.51	0.72	0.65	0.7775	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.670249	NA	NA	0.82549	0.777147	NA	NA	NA	4.2405766
1228	22	42780985	42780985	T	C	UTR3	NFAM1	NM_145912:c.*182A>G	NA	NA	UTR3	ENSG00000235568	ENST00000329021:c.*182A>G	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs12484229	0.16	0.16	0.097	0.160144	0.0934	0.2272	0.2867	0.0787	0.18	0.09	0.23	0.3	0.1	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.376135	NA	NA	NA	NA	NA	0.087	NA	4.2399334
1228	9	27202870	27202870	A	G	exonic	TEK	NA	synonymous SNV	TEK:NM_000459:exon13:c.A1962G:p.S654S	exonic	ENSG00000120156	NA	synonymous SNV	ENSG00000120156:ENST00000519080:exon10:c.A1392G:p.S464S,ENSG00000120156:ENST00000519097:exon11:c.A1521G:p.S507S,ENSG00000120156:ENST00000406359:exon12:c.A1833G:p.S611S,ENSG00000120156:ENST00000380036:exon13:c.A1962G:p.S654S	NA	NA	9p21.2	NA	NA	NA	NA	rs639225	0.44	0.44	0.393	0.414337	0.4811	0.3998	0.5086	0.3336	0.4029	0.49	0.42	0.52	0.33	0.4649	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.765269	NA	NA	0.48093	0.378575	NA	0.471	NA	4.2397366
1228	12	9464828	9464828	C	T	ncRNA_intronic	LOC642846	NA	NA	NA	ncRNA_intronic	ENSG00000111788	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs12581470	0.38	0.38	0.36	0.345647	0.4274	0.3998	0.3314	0.3464	0.2147	0.42	0.41	0.33	0.32	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.057802	NA	NA	NA	NA	NA	0.319	NA	4.2392666
1228	22	42781071	42781071	G	A	UTR3	NFAM1	NM_145912:c.*96C>T	NA	NA	UTR3	ENSG00000235568	ENST00000329021:c.*96C>T	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs12484478	0.16	0.16	0.113	0.161542	0.0944	0.2272	0.2867	0.0855	0.1769	0.09	0.23	0.31	0.1	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.802179	NA	NA	NA	NA	NA	0.087	NA	4.2389334
1228	19	43529027	43529027	A	G	exonic	PSG11	NA	synonymous SNV	PSG11:NM_002785:exon2:c.T246C:p.Y82Y	exonic	ENSG00000243130	NA	synonymous SNV	ENSG00000243130:ENST00000320078:exon2:c.T246C:p.Y82Y,ENSG00000243130:ENST00000401740:exon2:c.T246C:p.Y82Y,ENSG00000243130:ENST00000593983:exon2:c.T138C:p.Y46Y,ENSG00000243130:ENST00000598133:exon2:c.T246C:p.Y82Y	NA	NA	19q13.31	NA	NA	NA	NA	rs1058958	0.53	0.53	0.59	0.642971	0.4751	0.9871	0.4942	0.6415	0.5685	0.38	0.84	0.43	0.48	0.5212	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.773364	NA	NA	0.431448	0.634834	NA	NA	NA	4.2389186
1228	5	115553680	115553680	C	T	intronic	COMMD10	NA	NA	NA	intronic	ENSG00000145781	NA	NA	NA	Score=507;Name=lod=153	NA	5q23.1	NA	NA	NA	NA	rs6872730	0.61	0.61	0.542	0.564497	0.7614	0.6528	0.6916	0.1399	0.7546	0.77	0.67	0.75	0.18	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.984193	NA	NA	NA	NA	NA	0.536	NA	4.2386
1228	20	10367323	10367323	C	G	intergenic	SNAP25,MKKS	dist=79257;dist=18105	NA	NA	ncRNA_exonic	ENSG00000230750	NA	NA	NA	Score=618;Name=lod=432	NA	20p12.2	NA	NA	NA	NA	rs6039900	0.69	0.69	0.681	0.691294	0.7614	0.5268	0.8444	0.6974	0.6718	0.75	0.52	0.81	0.72	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.45349	NA	NA	NA	NA	NA	0.703	NA	4.2386
1228	20	10367409	10367409	C	T	intergenic	SNAP25,MKKS	dist=79343;dist=18019	NA	NA	ncRNA_exonic	ENSG00000230750	NA	NA	NA	Score=769;Name=lod=1776	NA	20p12.2	NA	NA	NA	NA	rs6039901	0.69	0.69	0.674	0.691693	0.7614	0.5268	0.8444	0.6997	0.6708	0.75	0.52	0.81	0.72	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.105952	NA	NA	NA	NA	NA	0.71	NA	4.2386
1228	21	46074104	46074104	T	C	intronic	TSPEAR	NA	NA	NA	intronic	ENSG00000175894	NA	NA	NA	NA	NA	21q22.3	NA	NA	Name=2	NA	rs2073437	0.77	0.77	0.757	0.789537	0.7614	0.6637	0.7507	0.9198	0.7996	0.76	0.64	0.77	0.92	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.661848	NA	NA	NA	NA	NA	0.696	NA	4.2386
1228	11	2016619	2016619	A	G	ncRNA_exonic	H19	NA	NA	NA	ncRNA_exonic	ENSG00000130600	NA	NA	NA	NA	NA	11p15.5	NA	NA	Name=13	NA	rs3741219	0.36	0.36	0.33	0.298323	0.5	0.3343	0.4121	0.0825	0.2648	0.52	0.33	0.41	0.11	0.4208	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.67109	NA	NA	0.50729	0.143429	NA	0.21	NA	4.2385766
1228	16	77850966	77850966	T	C	intronic	VAT1L	NA	NA	NA	intronic	ENSG00000171724	NA	NA	NA	NA	NA	16q23.1	NA	NA	Name=2	NA	rs2966053	0.22	0.22	0.187	0.234824	0.2664	0.1885	0.255	0.171	0.3221	0.26	0.2	0.26	0.16	0.2581	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.329922	NA	NA	0.237326	0.171065	NA	0.203	NA	4.238174
1228	22	36007045	36007045	G	A	exonic	MB	NA	synonymous SNV	MB:NM_005368:exon2:c.C204T:p.T68T,MB:NM_203377:exon3:c.C204T:p.T68T,MB:NM_203378:exon3:c.C204T:p.T68T	exonic	ENSG00000198125	NA	synonymous SNV	ENSG00000198125:ENST00000397326:exon2:c.C204T:p.T68T,ENSG00000198125:ENST00000401702:exon2:c.C39T:p.T13T,ENSG00000198125:ENST00000442617:exon2:c.C39T:p.T13T,ENSG00000198125:ENST00000359787:exon3:c.C204T:p.T68T,ENSG00000198125:ENST00000397328:exon3:c.C204T:p.T68T,ENSG00000198125:ENST00000406324:exon3:c.C204T:p.T68T,ENSG00000198125:ENST00000443033:exon3:c.C204T:p.T68T,ENSG00000198125:ENST00000451685:exon3:c.C204T:p.T68T,ENSG00000198125:ENST00000419229:exon4:c.C204T:p.T68T,ENSG00000198125:ENST00000447607:exon4:c.C204T:p.T68T	NA	NA	22q12.3	NA	NA	NA	NA	rs7292	0.55	0.55	0.574	0.564297	0.4493	0.747	0.4798	0.5703	0.546	0.44	0.73	0.47	0.59	0.5118	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.95449	NA	NA	0.467674	0.550386	NA	0.5	NA	4.2378926
1228	17	62893412	62893412	A	G	UTR5	LRRC37A3	NM_199340:c.-37T>C	NA	NA	ncRNA_UTR5	ENSG00000176809	NA	NA	NA	NA	NA	17q24.1	NA	NA	NA	NA	rs3874801	NA	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.1314	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.022184	NA	NA	0.130814	0.041725	NA	NA	NA	4.237786
1228	18	22008913	22008913	C	T	intronic	IMPACT	NA	NA	NA	intronic	ENSG00000154059	NA	NA	NA	Score=284;Name=lod=19	NA	18q11.2	NA	Name=CTCF	Name=6	NA	rs582358	0.87	0.87	0.862	0.86901	0.9374	0.6607	0.9755	0.9327	0.8517	0.93	0.67	0.97	0.95	0.903	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.491413	NA	NA	0.92186	0.929414	NA	0.855	NA	4.23774
1228	5	127120752	127120752	A	T	intergenic	CTXN3,FLJ33630	dist=126430;dist=236492	NA	NA	ncRNA_exonic	ENSG00000251032	NA	NA	NA	Score=779;Name=lod=1954	NA	5q23.2	NA	NA	NA	NA	rs1464132	0.83	0.83	0.824	0.808706	0.7624	0.9048	0.8372	0.789	0.7638	0.77	0.91	0.81	0.82	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.692242	1.692242	NA	NA	NA	NA	0.848	NA	4.2376
1228	22	22720928	22720928	G	A	intergenic	LOC96610,ZNF280B	dist=43604;dist=117844	NA	NA	ncRNA_exonic	ENSG00000237428	NA	NA	NA	Score=612;Name=lod=410	NA	22q11.22	NA	NA	NA	NA	rs5758013	0.75	0.75	0.731	0.725439	0.7624	0.8988	0.8098	0.4781	0.7832	0.76	0.91	0.8	0.49	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.078702	NA	NA	NA	NA	NA	0.601	NA	4.2376
1228	22	22720982	22720982	C	A	intergenic	LOC96610,ZNF280B	dist=43658;dist=117790	NA	NA	ncRNA_exonic	ENSG00000237428	NA	NA	NA	Score=612;Name=lod=410	NA	22q11.22	NA	NA	NA	NA	rs5758014	0.72	0.72	0.716	0.72524	0.7624	0.8988	0.8098	0.4773	0.7832	0.74	0.87	0.76	0.48	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.041632	NA	NA	NA	NA	NA	NA	NA	4.2376
1228	22	22720983	22720983	T	G	intergenic	LOC96610,ZNF280B	dist=43659;dist=117789	NA	NA	ncRNA_exonic	ENSG00000237428	NA	NA	NA	Score=612;Name=lod=410	NA	22q11.22	NA	NA	NA	NA	rs5758015	0.71	0.71	0.719	0.72524	0.7624	0.8988	0.8098	0.4773	0.7832	0.73	0.86	0.76	0.47	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.11674	NA	NA	NA	NA	NA	NA	NA	4.2376
1228	22	27283289	27283289	T	C	intergenic	MIAT,MN1	dist=210849;dist=860976	NA	NA	ncRNA_intronic	ENSG00000231369	NA	NA	NA	Score=745;Name=lod=1425	NA	22q12.1	NA	NA	NA	NA	rs2017722	0.77	0.77	0.748	0.761182	0.7624	0.8423	0.8372	0.7156	0.684	0.75	0.85	0.81	0.7	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.090032	NA	NA	NA	NA	NA	0.717	NA	4.2376
1228	16	23847786	23847786	T	C	intronic	PRKCB	NA	NA	NA	intronic	ENSG00000166501	NA	NA	NA	NA	NA	16p12.2	NA	Name=CTCF,CTCF_(C-20)	NA	NA	rs7185969	0.74	0.74	0.708	0.722444	0.7624	0.7153	0.7752	0.7201	0.6544	0.78	0.68	0.76	0.75	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.445758	1.445758	NA	NA	NA	NA	0.275	NA	4.2376
1228	16	23847797	23847797	G	C	intronic	PRKCB	NA	NA	NA	intronic	ENSG00000166501	NA	NA	NA	NA	NA	16p12.2	NA	Name=CTCF_(C-20),CTCF	NA	NA	rs7184949	0.74	0.74	0.728	0.722444	0.7624	0.7153	0.7752	0.7201	0.6544	0.78	0.68	0.76	0.75	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.794122	NA	NA	NA	NA	NA	0.297	NA	4.2376
1228	8	135577530	135577530	G	A	intronic	ZFAT	NA	NA	NA	intronic	ENSG00000066827	NA	NA	NA	NA	NA	8q24.22	NA	NA	Name=8	NA	rs6999469	0.31	0.31	0.255	0.303115	0.2475	0.5387	0.3141	0.1172	0.3609	0.25	0.53	0.3	0.13	0.2883	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.075148	NA	NA	0.226708	0.135175	NA	0.159	NA	4.237492
1228	11	18729597	18729597	A	G	intronic	IGSF22	NA	NA	NA	ncRNA_intronic	ENSG00000254966	NA	NA	NA	NA	NA	11p15.1	NA	NA	NA	NA	rs7110914	0.09	0.09	0.084	0.0888578	0.0964	0.0714	0.1297	0.0613	0.1074	0.1	0.08	0.11	0.07	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.64824	NA	NA	NA	NA	NA	0.116	NA	4.2369333
1228	21	46077812	46077812	A	G	intronic	TSPEAR	NA	NA	NA	intronic	ENSG00000175894	NA	NA	NA	NA	NA	21q22.3	NA	NA	Name=8	NA	rs2838617	0.77	0.77	0.773	0.789736	0.7634	0.6637	0.7507	0.9198	0.7986	0.77	0.64	0.77	0.92	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.533021	NA	NA	NA	NA	NA	0.703	NA	4.2366
1228	12	69967862	69967862	G	A	exonic	FRS2	NA	synonymous SNV	FRS2:NM_001042555:exon10:c.G654A:p.A218A,FRS2:NM_006654:exon10:c.G654A:p.A218A	exonic	ENSG00000166225	NA	synonymous SNV	ENSG00000166225:ENST00000550389:exon7:c.G654A:p.A218A,ENSG00000166225:ENST00000397997:exon8:c.G654A:p.A218A,ENSG00000166225:ENST00000549921:exon9:c.G654A:p.A218A,ENSG00000166225:ENST00000299293:exon10:c.G654A:p.A218A	NA	NA	12q15	NA	NA	NA	NA	rs547497	0.43	0.43	0.436	0.463059	0.4662	0.2708	0.5303	0.4894	0.5746	0.47	0.25	0.54	0.51	0.481	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.265918	1.265918	NA	0.482909	0.487996	ID=COSM147563;OCCURENCE=1(stomach)	0.493	NA	4.2365576
1228	11	2017017	2017017	A	C	ncRNA_exonic	H19	NA	NA	NA	ncRNA_exonic	ENSG00000130600	NA	NA	NA	NA	NA	11p15.5	NA	Name=Egr-1	NA	NA	rs2839702	0.35	0.35	0.326	0.290136	0.5	0.3323	0.4049	0.0552	0.2669	0.52	0.33	0.41	0.07	0.4211	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.19432	NA	NA	0.509045	0.121281	NA	0.333	NA	4.2365216
1228	2	216288841	216288841	T	C	intronic	FN1	NA	NA	NA	intronic	ENSG00000115414	NA	NA	NA	NA	NA	2q35	NA	NA	Name=42	NA	rs56137176	0.19	0.19	0.173	0.190895	0.2664	NA	0.1671	0.2345	0.2679	0.27	NA	0.21	0.26	0.2346	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.962232	NA	NA	0.262558	0.225148	NA	0.188	NA	4.236442
1228	22	36537500	36537500	A	T	exonic	APOL3	NA	synonymous SNV	APOL3:NM_145640:exon3:c.T957A:p.G319G,APOL3:NM_145642:exon4:c.T357A:p.G119G,APOL3:NM_145641:exon5:c.T357A:p.G119G	exonic	ENSG00000128284	NA	synonymous SNV	ENSG00000128284:ENST00000349314:exon3:c.T957A:p.G319G,ENSG00000128284:ENST00000361710:exon4:c.T357A:p.G119G,ENSG00000128284:ENST00000397293:exon4:c.T744A:p.G248G,ENSG00000128284:ENST00000424878:exon4:c.T357A:p.G119G,ENSG00000128284:ENST00000397287:exon5:c.T357A:p.G119G	NA	NA	22q12.3	NA	NA	NA	NA	rs132618	0.36	0.36	0.361	0.36262	0.496	0.3502	0.3847	0.0651	0.6247	0.51	0.36	0.43	0.08	0.4488	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.385526	NA	NA	0.485465	0.13005	ID=COSM149285;OCCURENCE=1(stomach)	0.384	NA	4.2364016
1228	10	50960209	50960209	G	A	exonic	OGDHL	NA	synonymous SNV	OGDHL:NM_001143996:exon4:c.C393T:p.L131L,OGDHL:NM_018245:exon5:c.C564T:p.L188L	exonic	ENSG00000197444	NA	synonymous SNV	ENSG00000197444:ENST00000419399:exon4:c.C393T:p.L131L,ENSG00000197444:ENST00000374103:exon5:c.C564T:p.L188L	NA	NA	10q11.23	NA	NA	NA	NA	rs1258184	0.52	0.52	0.467	0.464257	0.4642	0.9107	0.4798	0.1407	0.4305	0.47	0.9	0.52	0.15	0.4814	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.216853	NA	NA	0.484884	0.198593	NA	0.333	NA	4.2361826
1228	20	30746248	30746248	T	C	intronic	TM9SF4	NA	NA	NA	intronic	ENSG00000101337	NA	NA	NA	NA	NA	20q11.21	Score=705;Name=V$HOX13_01	Name=Pol2	NA	NA	rs6061195	0.76	0.76	0.75	0.741014	0.5467	0.9742	0.7061	0.9062	0.502	0.55	0.98	0.67	0.92	0.6456	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.164814	NA	NA	0.57186	0.829551	NA	0.725	NA	4.23584
1228	7	53103571	53103571	G	A	exonic	POM121L12	NA	synonymous SNV	POM121L12:NM_182595:exon1:c.G207A:p.G69G	exonic	ENSG00000221900	NA	synonymous SNV	ENSG00000221900:ENST00000408890:exon1:c.G207A:p.G69G	NA	NA	7p12.1	NA	NA	NA	NA	rs11238248	0.37	0.37	0.348	0.328674	0.4861	0.3026	0.4308	0.1725	0.3323	0.49	0.31	0.43	0.2	0.4393	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.295191	NA	NA	0.505443	0.211569	NA	0.362	NA	4.2358236
1228	9	138679895	138679895	T	C	intronic	KCNT1	NA	NA	NA	intronic	ENSG00000107147	NA	NA	NA	Score=478;Name=lod=117	NA	9q34.3	NA	NA	NA	NA	rs11103190	0.31	0.31	0.295	0.329473	0.2356	0.3294	0.2435	0.4796	0.2843	0.23	0.31	0.25	0.48	0.2693	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.831011	NA	NA	0.259302	0.452338	NA	0.326	NA	4.235798
1228	4	2951519	2951519	A	G	ncRNA_intronic	NOP14-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000249673	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs2515961	0.42	0.42	0.388	0.402356	0.4314	0.1895	0.4107	0.6808	0.2096	0.44	0.18	0.42	0.67	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.848168	NA	NA	NA	NA	NA	0.341	NA	4.2352666
1228	4	100266133	100266133	T	C	exonic	ADH1C	NA	unknown	UNKNOWN	exonic	ENSG00000248144	NA	unknown	UNKNOWN	NA	NA	4q23	NA	NA	NA	NA	rs2241894	0.42	0.42	0.435	0.471645	0.2306	0.7639	0.1744	0.4947	0.5982	0.23	0.77	0.17	0.49	0.3088	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.635088	NA	NA	0.225349	0.448933	NA	0.435	NA	4.235251
1228	15	79502096	79502096	G	C	ncRNA_intronic	LOC729911	NA	NA	NA	ncRNA_intronic	ENSG00000259234	NA	NA	NA	NA	NA	15q25.1	NA	NA	Name=7	NA	rs12903401	0.44	0.44	0.387	0.391174	0.4781	0.5952	0.5821	0.1293	0.3098	0.47	0.6	0.53	0.12	0.4577	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.479972	2.479972	NA	0.495804	0.191864	NA	0.333	NA	4.2350626
1229	1	201355943	201355943	C	T	exonic	LAD1	NA	synonymous SNV	LAD1:NM_005558:exon3:c.G546A:p.K182K	exonic	ENSG00000159166	NA	synonymous SNV	ENSG00000159166:ENST00000367313:exon3:c.G588A:p.K196K,ENSG00000159166:ENST00000391967:exon3:c.G546A:p.K182K	NA	NA	1q32.1	NA	NA	NA	NA	rs2799677	0.52	0.52	0.52	0.517572	0.4622	0.5179	0.3775	0.7474	0.363	0.46	0.49	0.42	0.72	0.4814	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.023228	NA	NA	0.488256	0.690422	NA	0.58	NA	4.2348106
1229	6	51938242	51938242	A	G	intronic	PKHD1	NA	NA	NA	intronic	ENSG00000170927	NA	NA	NA	NA	NA	6p12.2	NA	NA	NA	NA	rs9474140	0.32	0.32	0.303	0.329872	0.2455	0.4216	0.245	0.3177	0.3988	0.24	0.41	0.25	0.37	0.2766	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.662112	NA	NA	0.243256	0.328416	ID=COSN167790;OCCURENCE=1(large_intestine)	0.283	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000082557.1;CLNDSDB=.;CLNDSDBID=.	4.234644
1229	2	133066879	133066879	G	A	intergenic	ANKRD30BL,GPR39	dist=51337;dist=107268	NA	NA	upstream	ENSG00000018607	NA	NA	NA	NA	NA	2q21.2	NA	Name=MafK_(ab50322),MafK_(SC-477)	NA	NA	rs2677610	NA	NA	NA	0.223842	0.2654	0.1647	0.2478	0.143	0.3344	NA	NA	NA	NA	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.730133	NA	NA	NA	NA	NA	0.471	NA	4.2346
1229	11	116657561	116657561	C	T	intronic	ZNF259	NA	NA	NA	intronic	ENSG00000109917	NA	NA	NA	NA	Name=Obesity-related traits	11q23.3	NA	NA	NA	NA	rs3741298	0.67	0.67	0.669	0.649561	0.7654	0.5913	0.572	0.6339	0.6667	0.78	0.57	0.63	0.67	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.634977	1.634977	NA	NA	NA	NA	0.739	NA	4.2346
1229	9	123586737	123586737	T	G	intronic	PSMD5	NA	NA	NA	intronic	ENSG00000095261	NA	NA	NA	NA	NA	9q33.2	NA	NA	NA	NA	rs10760117	0.48	0.48	0.449	0.489217	0.5895	0.4732	0.6542	0.1611	0.729	0.59	0.46	0.62	0.22	0.5815	0.62	0	D	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.938	T	0.000	T	0.043	1.217	9.939	-1.71	-0.279	0.133	5.168	1.216911	NA	0	0.594535	0.22946	NA	0.5	NA	4.234465
1229	19	45185810	45185810	G	A	intronic	CEACAM19	NA	NA	NA	ncRNA_intronic	ENSG00000266903	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs116354108	0.04	0.04	0.052	0.0461262	0.0199	NA	0.0202	0.1241	0.0337	0.02	NA	0.03	0.14	0.0592	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0631	NA	NA	0.019809	0.105431	NA	0.014	NA	4.2344243
1229	1	18149566	18149566	C	A	exonic	ACTL8	NA	synonymous SNV	ACTL8:NM_030812:exon2:c.C63A:p.G21G	exonic	ENSG00000117148	NA	synonymous SNV	ENSG00000117148:ENST00000375406:exon2:c.C63A:p.G21G	NA	NA	1p36.13	NA	NA	NA	NA	rs2296035	0.52	0.52	0.5	0.482827	0.4732	0.6865	0.5807	0.3215	0.4315	0.5	0.69	0.49	0.35	0.4969	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.605718	NA	NA	0.462209	0.343395	NA	0.377	NA	4.2343576
1229	21	15326405	15326405	C	T	ncRNA_exonic	ANKRD20A11P	NA	NA	NA	ncRNA_exonic	ENSG00000215559	NA	NA	NA	NA	NA	21q11.2	NA	NA	NA	NA	rs8127713	0.44	0.44	0.419	0.479233	0.4324	0.3651	0.5836	0.5182	0.5184	0.42	0.35	0.54	0.5	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.225724	NA	NA	NA	NA	NA	0.014	NA	4.2342666
1229	8	91064126	91064126	G	A	UTR3	DECR1	NM_001359:c.*1G>A	NA	NA	UTR3	ENSG00000104325	ENST00000220764:c.*1G>A,ENST00000519328:c.*580G>A,ENST00000517597:c.*680G>A,ENST00000522161:c.*1G>A,ENST00000520148:c.*116G>A	NA	NA	NA	NA	8q21.3	NA	NA	NA	NA	rs7162	0.02	0.02	0.01	0.0103834	0.0328	NA	0.013	0.0023	0.0072	0.04	NA	0.01	0.0041	0.0279	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.153417	NA	NA	0.038488	0.007717	NA	NA	NA	4.2341454
1229	22	41744022	41744022	C	G	intronic	ZC3H7B	NA	NA	NA	intronic	ENSG00000100403	NA	NA	NA	NA	NA	22q13.2	NA	Name=ZNF263	NA	NA	rs761366	0.19	0.19	0.136	0.207268	0.2525	0.0546	0.415	0.056	0.3753	0.25	0.06	0.43	0.06	0.2625	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.064791	NA	NA	0.25093	0.083976	ID=COSN166763;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.232	NA	4.23407
1229	1	205595068	205595068	A	G	intronic	ELK4	NA	NA	NA	ncRNA_intronic	ENSG00000236942	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs12048270	0.18	0.18	0.105	0.234425	0.0994	0.3819	0.1311	0.2239	0.3088	0.1	0.34	0.1	0.18	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.636612	NA	NA	NA	NA	NA	0.167	NA	4.2339333
1229	11	124121199	124121199	G	C	exonic	OR8G1	NA	unknown	UNKNOWN	ncRNA_exonic	ENSG00000197849	NA	NA	NA	Score=265;Name=lod=16	NA	11q24.2	NA	NA	NA	NA	rs4268525	0.5	0.5	0.466	0.444688	0.5527	0.5833	0.5591	0.3154	0.2843	0.54	0.59	0.54	0.31	0.4996	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.414446	NA	NA	0.547219	0.352161	NA	0.297	NA	4.2338143
1229	17	41154600	41154600	C	T	intronic	RPL27	NA	NA	NA	intronic	ENSG00000131469	NA	NA	NA	NA	NA	17q21.31	NA	Name=Pol2,Pol2-4H8	NA	NA	rs8076790	0.79	0.79	0.798	0.748802	0.7664	0.8472	0.7997	0.6558	0.7188	0.77	0.87	0.77	0.72	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.035503	NA	NA	NA	NA	NA	0.797	NA	4.2336
1229	1	6694574	6694574	G	A	UTR3	DNAJC11,THAP3	NM_018198:c.*1161C>T;NM_138350:c.*426G>A	NA	NA	UTR3	ENSG00000007923,ENSG00000041988	ENST00000349363:c.*12C>T,ENST00000377577:c.*1161C>T,ENST00000451196:c.*12C>T;ENST00000377627:c.*426G>A	NA	NA	NA	NA	1p36.31	NA	NA	Name=6	NA	rs6804	0.3	0.3	0.296	0.336861	0.33	0.3869	0.3343	0.1921	0.4898	0.33	0.38	0.31	0.16	0.4264	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.491691	NA	NA	0.343734	0.200918	NA	0.312	NA	4.2331994
1229	3	193081864	193081864	G	A	intronic	ATP13A5	NA	NA	NA	intronic	ENSG00000187527	NA	NA	NA	NA	NA	3q29	Score=824;Name=V$BRN2_01	NA	NA	NA	rs923495	0.25	0.25	0.219	0.289936	0.2326	0.2232	0.2781	0.3434	0.3538	0.23	0.21	0.25	0.32	0.2748	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.194353	NA	NA	0.26	0.344076	NA	0.21	NA	4.2326
1229	10	135352153	135352153	A	G	intronic	CYP2E1	NA	NA	NA	intronic	ENSG00000130649,ENSG00000203772	NA	NA	NA	NA	Name=Obesity-related traits	10q26.3	NA	NA	NA	NA	rs2249694	0.59	0.59	0.544	0.554113	0.7674	0.5565	0.745	0.2398	0.6217	0.77	0.56	0.73	0.27	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.172527	NA	NA	NA	NA	NA	0.543	NA	4.2326
1229	19	45574113	45574113	T	G	UTR3	CLASRP	NM_007056:c.*10T>G	NA	NA	UTR3	ENSG00000104859	ENST00000221455:c.*10T>G,ENST00000391953:c.*10T>G,ENST00000391952:c.*254T>G,ENST00000544944:c.*10T>G,ENST00000591904:c.*10T>G	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs201269048	0.02	0.02	NA	0.0183706	0.0388	NA	0.0173	0.003	0.0378	0.04	NA	0.03	NA	0.0366	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.330845	NA	NA	0.025698	0.002497	NA	NA	NA	4.2322354
1229	6	126965321	126965321	G	A	intergenic	CENPW,RSPO3	dist=295567;dist=474727	NA	NA	ncRNA_exonic	ENSG00000217325	NA	NA	NA	Score=719;Name=lod=1118	NA	6q22.32	NA	NA	NA	NA	rs6926614	0.85	0.85	0.859	0.908946	0.7684	0.997	0.8991	0.9077	0.9714	0.74	0.99	0.85	0.88	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.659943	NA	NA	NA	NA	NA	0.826	NA	4.2316
1229	14	54458078	54458078	C	T	intergenic	BMP4,CDKN3	dist=34524;dist=405595	NA	NA	ncRNA_exonic	ENSG00000224004	NA	NA	NA	Score=562;Name=lod=256	NA	14q22.2	NA	NA	NA	NA	rs1957844	0.58	0.58	0.59	0.553514	0.7684	0.4633	0.6052	0.3638	0.6452	0.75	0.47	0.64	0.4	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.252645	1.252645	NA	NA	NA	NA	0.514	NA	4.2316
1229	14	54458159	54458159	T	C	intergenic	BMP4,CDKN3	dist=34605;dist=405514	NA	NA	ncRNA_exonic	ENSG00000224004	NA	NA	NA	Score=525;Name=lod=181	NA	14q22.2	NA	NA	NA	NA	rs1957845	0.58	0.58	0.587	0.553714	0.7684	0.4643	0.6052	0.3638	0.6452	0.75	0.47	0.64	0.4	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.067348	NA	NA	NA	NA	NA	0.514	NA	4.2316
1229	18	21474827	21474827	G	A	intronic	LAMA3	NA	NA	NA	intronic	ENSG00000053747	NA	NA	NA	NA	NA	18q11.2	NA	NA	Name=3	NA	rs1268716	0.18	0.18	0.166	0.16853	0.2624	0.1875	0.1902	0.0151	0.2444	0.27	0.17	0.2	0.03	0.2355	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.385109	NA	NA	0.27093	0.057649	NA	0.174	NA	4.23117
1229	7	150498245	150498245	T	C	UTR5	TMEM176B	NM_014020:c.-4588A>G	NA	NA	UTR5	ENSG00000106565	ENST00000447204:c.-4588A>G	NA	NA	NA	NA	7q36.1	NA	NA	NA	NA	rs114949263	0.05	0.05	0.049	0.0453275	0.1024	0.002	0.0648	0.0333	0.0337	0.09	NA	0.07	0.03	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.594073	NA	NA	NA	NA	NA	0.08	NA	4.2309334
1229	1	109796053	109796053	C	T	intronic	CELSR2	NA	NA	NA	intronic	ENSG00000143126	NA	NA	NA	NA	NA	1p13.3	NA	Name=Pol2	NA	NA	rs2359414	0.29	0.29	0.261	0.303514	0.2416	0.4504	0.2522	0.2753	0.2904	0.25	0.44	0.23	0.24	0.2937	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.062661	NA	NA	0.234075	0.250458	NA	0.261	NA	4.230625
1229	1	207040659	207040659	G	A	intronic	IL20	NA	NA	NA	intronic	ENSG00000162891	NA	NA	NA	NA	NA	1q32.1	NA	Name=GTF2F1_(RAP-74),STAT3,c-Jun,JunD,USF2	NA	NA	rs2232360	0.65	0.65	0.635	0.673323	0.7694	0.3383	0.6715	0.8124	0.7331	0.78	0.29	0.71	0.8	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.780355	NA	NA	NA	NA	NA	0.63	NA	4.2306
1229	14	21168084	21168084	C	T	UTR3	RNASE4	NM_002937:c.*110C>T,NM_194431:c.*110C>T	NA	NA	ncRNA_exonic	ENSG00000259171	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs11541061	0.32	0.32	0.3	0.269169	0.2694	0.5615	0.2334	0.0809	0.2474	0.27	0.6	0.27	0.11	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.152598	NA	NA	NA	NA	NA	0.261	NA	4.2306
1229	1	41499540	41499540	T	C	ncRNA_intronic	SLFNL1-AS1	NA	NA	NA	intronic	ENSG00000010803	NA	NA	NA	NA	NA	1p34.2	NA	NA	NA	NA	rs74545213	0.09	0.09	0.07	0.0914537	0.1034	0.119	0.1542	0.0038	0.1247	0.1	0.12	0.13	0.01	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.480428	NA	NA	NA	NA	NA	0.043	NA	4.2299333
1229	8	6886972	6886972	G	A	ncRNA_exonic	DEFA11P	NA	NA	NA	ncRNA_exonic	ENSG00000234178	NA	NA	NA	NA	NA	8p23.1	NA	NA	NA	NA	rs4403430	0.39	0.39	0.396	0.361621	0.4374	0.4167	0.3127	0.2784	0.3742	0.45	0.43	0.38	0.26	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.486522	NA	NA	NA	NA	NA	0.399	NA	4.2292666
1229	16	57710093	57710093	C	G	intronic	GPR97	NA	NA	NA	intronic	ENSG00000182885	NA	NA	NA	NA	NA	16q21	NA	Name=BAF155,GTF2F1_(RAP-74),Pol2,SP1,TBP,JunD,TAL1_(SC-12984),NANOG_(SC-33759)	Name=26	NA	rs12596635	0.45	0.45	0.406	0.439297	0.6123	0.4563	0.4424	0.1959	0.5706	0.63	0.43	0.42	0.21	0.5338	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.664026	NA	NA	0.625116	0.268426	NA	0.471	NA	4.228784
1229	19	54746625	54746625	G	A	UTR5	LILRA6	NM_024318:c.-25C>T	NA	NA	UTR5	ENSG00000244482	ENST00000440558:c.-25C>T,ENST00000396365:c.-25C>T	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs201900075	0.02	0.02	0.02	0.00998403	0.0388	NA	0.0115	0.0023	NA	0.04	NA	0.02	0.01	0.0313	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.38993	NA	NA	0.034512	0.00666	NA	NA	NA	4.2287214
1229	20	48574116	48574116	T	C	intergenic	RNF114,SNAI1	dist=3694;dist=25397	NA	NA	ncRNA_exonic	ENSG00000229222	NA	NA	NA	NA	NA	20q13.13	NA	NA	Name=17	NA	rs1883553	0.7	0.7	0.653	0.679113	0.7714	0.8492	0.7695	0.3396	0.8037	0.76	0.86	0.76	0.35	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.161235	NA	NA	NA	NA	NA	0.63	NA	4.2286
1229	19	20806893	20806893	T	C	UTR3	ZNF626	NM_001076675:c.*203A>G	NA	NA	ncRNA_UTR3	ENSG00000188171	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs11085364	0.07	0.07	0.05	0.0776757	0.1203	0.0724	0.0994	0.0121	0.1125	0.13	0.06	0.08	0.01	0.1512	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.735799	NA	NA	NA	NA	NA	0.036	NA	4.2285
1229	12	30878859	30878859	G	C	intronic	CAPRIN2	NA	NA	NA	intronic	ENSG00000110888	NA	NA	NA	NA	NA	12p11.21	NA	Name=p300_(N-15),eGFP-FOS,c-Fos,c-Jun,STAT3,JunD,CEBPB,p300,CTCF,Rad21	Name=113	NA	rs7304879	0.57	0.57	0.615	0.596246	0.5905	0.4643	0.3818	0.8737	0.5153	0.59	0.46	0.38	0.82	0.5816	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.068562	NA	NA	0.599884	0.825465	NA	0.529	NA	4.228016
1229	1	103343470	103343470	G	A	UTR3	COL11A1	NM_080629:c.*105C>T,NM_001190709:c.*105C>T,NM_080630:c.*105C>T,NM_001854:c.*105C>T	NA	NA	UTR3	ENSG00000060718	ENST00000353414:c.*105C>T,ENST00000358392:c.*105C>T,ENST00000370096:c.*105C>T	NA	NA	NA	NA	1p21.1	NA	NA	NA	NA	rs1031820	0.12	0.12	0.122	0.103634	0.1054	0.0655	0.0706	0.1989	0.0358	0.1	0.07	0.07	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.204527	NA	NA	NA	NA	NA	0.167	NA	4.2279334
1229	7	65599196	65599196	G	A	intronic	CRCP	NA	NA	NA	ncRNA_intronic	ENSG00000234185	NA	NA	NA	NA	NA	7q11.21	NA	NA	NA	NA	rs2243480	0.12	0.12	0.09	0.135982	0.1054	0.1488	0.2104	0.059	0.2055	0.09	0.18	0.18	0.05	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.277963	NA	NA	NA	NA	NA	0.196	NA	4.2279333
1229	1	21799489	21799489	T	C	intronic	NBPF3	NA	NA	NA	intronic	ENSG00000142794	NA	NA	NA	NA	NA	1p36.12	NA	NA	Name=4	NA	rs1971327	0.74	0.74	0.714	0.749601	0.7724	0.8125	0.7925	0.5371	0.9182	0.77	0.78	0.82	0.57	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.120653	NA	NA	NA	NA	NA	0.703	NA	4.2276
1229	20	36231369	36231369	A	G	intergenic	BLCAP,LINC00489	dist=75036;dist=16331	NA	NA	ncRNA_exonic	ENSG00000228234	NA	NA	NA	NA	NA	20q11.23	NA	Name=MafF_(M8194),MafK_(SC-477)	NA	NA	rs4810923	0.7	0.7	0.699	0.644768	0.7724	0.7222	0.7867	0.5212	0.5	0.77	0.75	0.75	0.49	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.468435	NA	NA	NA	NA	NA	0.674	NA	4.2276
1229	2	100917109	100917109	C	T	exonic	LONRF2	NA	synonymous SNV	LONRF2:NM_198461:exon4:c.G1062A:p.S354S	exonic	ENSG00000170500	NA	synonymous SNV	ENSG00000170500:ENST00000393437:exon4:c.G1062A:p.S354S,ENSG00000170500:ENST00000409647:exon4:c.G333A:p.S111S	NA	NA	2q11.2	NA	NA	NA	NA	rs13006224	0.44	0.44	0.397	0.378594	0.498	0.7252	0.4467	0.0325	0.318	0.5	0.73	0.42	0.03	0.457	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.611511	1.611511	NA	0.484535	0.113255	NA	0.348	NA	4.2271316
1229	8	27667719	27667719	C	G	UTR3	PBK	NM_018492:c.*103G>C	NA	NA	UTR3	ENSG00000168078	ENST00000301905:c.*103G>C,ENST00000522944:c.*103G>C	NA	NA	NA	NA	8p21.1	NA	NA	NA	NA	rs1052874	0.2	0.2	0.199	0.222843	0.1064	0.3611	0.1066	0.2837	0.2004	0.09	0.36	0.12	0.26	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.480137	1.480137	NA	NA	NA	NA	0.246	NA	4.2269334
1229	2	70121197	70121197	T	C	intronic	SNRNP27	NA	NA	NA	intronic	ENSG00000124380	NA	NA	NA	NA	NA	2p13.3	NA	Name=NFKB,HEY1,ELF1_(SC-631),STAT1,HNF4G_(SC-6558),USF-1,TBP,JunD,TAF1,GABP,ELK4,STAT3,Pol2(phosphoS2),NRSF,Pol2,Pol2-4H8,TR4,KAP1,HDAC2_(SC-6296),Sin3Ak-20,YY1_(C-20),HA-E2F1	NA	NA	rs2278934	0.32	0.32	0.301	0.382987	0.2445	0.3313	0.2781	0.5416	0.4387	0.23	0.32	0.25	0.5	0.2971	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.372932	NA	NA	0.232791	0.480254	NA	0.319	NA	4.225609
1230	1	232581247	232581247	C	G	intronic	SIPA1L2	NA	NA	NA	intronic	ENSG00000116991	NA	NA	NA	NA	NA	1q42.2	NA	NA	Name=4	NA	rs1409369	0.37	0.37	0.348	0.385583	0.2197	0.5347	0.4625	0.3684	0.3712	0.21	0.56	0.43	0.37	0.3175	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.10783	NA	NA	0.23789	0.362443	NA	0.399	NA	4.22491
1230	4	154579924	154579924	G	A	intergenic	KIAA0922,TLR2	dist=22062;dist=25517	NA	NA	ncRNA_exonic	ENSG00000248208	NA	NA	NA	Score=686;Name=lod=818	NA	4q31.3	NA	NA	NA	NA	rs6819788	0.84	0.84	0.845	0.847045	0.7753	0.871	0.8977	0.851	0.8548	0.78	0.91	0.88	0.84	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.016854	NA	NA	NA	NA	NA	0.884	NA	4.2247
1230	17	37789998	37789998	T	C	intronic	PPP1R1B	NA	NA	NA	intronic	ENSG00000131771	NA	NA	NA	NA	NA	17q12	Score=761;Name=V$PPARG_01	NA	NA	NA	rs11651497	0.56	0.56	0.551	0.520567	0.7753	0.4365	0.5865	0.2337	0.6861	0.78	0.51	0.63	0.23	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.131337	2.131337	NA	NA	NA	NA	0.594	NA	4.2247
1230	3	148459395	148459395	C	T	exonic	AGTR1	NA	synonymous SNV	AGTR1:NM_009585:exon2:c.C573T:p.L191L,AGTR1:NM_000685:exon3:c.C573T:p.L191L,AGTR1:NM_004835:exon3:c.C678T:p.L226L,AGTR1:NM_032049:exon3:c.C660T:p.L220L,AGTR1:NM_031850:exon4:c.C678T:p.L226L	exonic	ENSG00000144891	NA	synonymous SNV	ENSG00000144891:ENST00000402260:exon2:c.C573T:p.L191L,ENSG00000144891:ENST00000404754:exon2:c.C573T:p.L191L,ENSG00000144891:ENST00000475347:exon2:c.C573T:p.L191L,ENSG00000144891:ENST00000497524:exon2:c.C573T:p.L191L,ENSG00000144891:ENST00000349243:exon3:c.C573T:p.L191L,ENSG00000144891:ENST00000418473:exon3:c.C573T:p.L191L,ENSG00000144891:ENST00000461609:exon3:c.C573T:p.L191L,ENSG00000144891:ENST00000474935:exon3:c.C573T:p.L191L,ENSG00000144891:ENST00000542281:exon4:c.C573T:p.L191L	NA	NA	3q24	NA	NA	NA	NA	rs5182	0.47	0.47	0.417	0.458067	0.492	0.6865	0.585	0.1566	0.5051	0.5	0.67	0.56	0.14	0.4837	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.970743	NA	NA	0.466395	0.215842	NA	0.449	NA	4.2245716
1230	20	56137834	56137834	A	G	exonic	PCK1	NA	synonymous SNV	PCK1:NM_002591:exon4:c.A489G:p.S163S	exonic	ENSG00000124253	NA	synonymous SNV	ENSG00000124253:ENST00000535860:exon2:c.A93G:p.S31S,ENSG00000124253:ENST00000319441:exon4:c.A489G:p.S163S	NA	NA	20q13.31	NA	NA	NA	NA	rs1062601	0.32	0.32	0.313	0.314097	0.5229	0.0308	0.3372	0.323	0.363	0.53	0.03	0.38	0.31	0.4145	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.547856	NA	NA	0.504884	0.34158	NA	0.478	NA	4.2243826
1230	15	78209307	78209307	T	C	ncRNA_intronic	LOC645752	NA	NA	NA	ncRNA_exonic	ENSG00000242066	NA	NA	NA	NA	NA	15q24.3	NA	NA	NA	NA	rs7162136	NA	NA	NA	0.439497	0.4423	0.6746	0.4424	0.2557	0.4407	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.163253	NA	NA	NA	NA	NA	NA	NA	4.2243666
1230	3	164697082	164697082	A	G	UTR3	SI	NM_001041:c.*68T>C	NA	NA	UTR3	ENSG00000090402	ENST00000264382:c.*68T>C	NA	NA	NA	NA	3q26.1	NA	NA	NA	NA	rs73018867	0.21	0.21	0.236	0.24401	0.1093	0.0665	0.1052	0.6233	0.1513	0.1	0.07	0.11	0.63	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.343805	NA	NA	NA	NA	NA	0.254	NA	4.2240334
1230	15	79852794	79852794	C	T	intergenic	KIAA1024,MTHFS	dist=88152;dist=283095	NA	NA	upstream	ENSG00000259493	NA	NA	NA	Score=794;Name=lod=2243	NA	15q25.1	NA	NA	NA	NA	rs12907949	0.35	0.35	0.313	0.328275	0.2763	0.6151	0.2507	0.2315	0.272	0.27	0.6	0.26	0.23	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.886148	NA	NA	NA	NA	NA	0.29	NA	4.2237
1230	2	33412077	33412077	G	A	exonic	LTBP1	NA	synonymous SNV	LTBP1:NM_000627:exon2:c.G378A:p.A126A,LTBP1:NM_001166264:exon2:c.G378A:p.A126A,LTBP1:NM_001166265:exon2:c.G378A:p.A126A,LTBP1:NM_001166266:exon2:c.G378A:p.A126A,LTBP1:NM_206943:exon6:c.G1356A:p.A452A	exonic	ENSG00000049323	NA	synonymous SNV	ENSG00000049323:ENST00000390003:exon2:c.G378A:p.A126A,ENSG00000049323:ENST00000402934:exon2:c.G378A:p.A126A,ENSG00000049323:ENST00000404525:exon2:c.G378A:p.A126A,ENSG00000049323:ENST00000407925:exon2:c.G378A:p.A126A,ENSG00000049323:ENST00000418533:exon2:c.G378A:p.A126A,ENSG00000049323:ENST00000432635:exon3:c.G135A:p.A45A,ENSG00000049323:ENST00000354476:exon6:c.G1356A:p.A452A,ENSG00000049323:ENST00000404816:exon6:c.G1356A:p.A452A	NA	NA	2p22.3	NA	NA	NA	NA	rs1065324	0.43	0.43	0.398	0.367812	0.4841	0.371	0.4496	0.2693	0.32	0.49	0.4	0.46	0.34	0.4592	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.592677	NA	NA	0.499884	0.331139	NA	0.355	NA	4.2234826
1230	7	39472669	39472669	C	T	intronic	POU6F2	NA	NA	NA	intronic	ENSG00000106536	NA	NA	NA	Score=570;Name=lod=277	NA	7p14.1	NA	NA	NA	NA	rs2302125	0.33	0.33	0.313	0.314297	0.2386	0.5119	0.2622	0.3185	0.2198	0.24	0.5	0.24	0.33	0.2845	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.060049	2.060049	NA	0.253488	0.340445	NA	0.239	NA	4.223412
1230	22	25320256	25320256	C	T	UTR3	SGSM1	NM_133454:c.*15C>T,NM_001098498:c.*15C>T,NM_001039948:c.*15C>T,NM_001098497:c.*15C>T	NA	NA	UTR3	ENSG00000167037	ENST00000400358:c.*15C>T,ENST00000400359:c.*15C>T	NA	NA	NA	NA	22q11.23	NA	NA	NA	NA	rs9612811	0.03	0.03	0.022	0.01877	0.0447	0.001	0.0144	0.0242	0.0061	0.05	0.0017	0.03	0.02	0.0321	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.34138	NA	NA	0.033421	0.026446	NA	0.007	NA	4.2231124
1230	3	130547086	130547086	A	C	intergenic	PIK3R4,ATP2C1	dist=81390;dist=22283	NA	NA	ncRNA_exonic	ENSG00000232829	NA	NA	NA	Score=500;Name=lod=143	NA	3q22.1	NA	NA	NA	NA	rs4487219	0.81	0.81	0.802	0.820687	0.7773	0.9196	0.8141	0.7973	0.7996	0.78	0.91	0.79	0.75	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.735016	NA	NA	NA	NA	NA	0.71	NA	4.2227
1230	8	57390066	57390066	G	A	intergenic	PENK,LOC100507632	dist=30784;dist=40812	NA	NA	ncRNA_exonic	ENSG00000253541	NA	NA	NA	Score=569;Name=lod=274	NA	8q12.1	NA	NA	NA	NA	rs2609979	0.81	0.81	0.807	0.821486	0.7773	0.8929	0.7954	0.7882	0.8569	0.78	0.89	0.78	0.77	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.522343	NA	NA	NA	NA	NA	0.87	NA	4.2227
1230	8	57390386	57390386	A	G	intergenic	PENK,LOC100507632	dist=31104;dist=40492	NA	NA	ncRNA_exonic	ENSG00000253541	NA	NA	NA	Score=459;Name=lod=98	NA	8q12.1	NA	NA	NA	NA	rs2016795	0.73	0.73	0.806	0.821885	0.7773	0.8929	0.7954	0.7882	0.8589	0.71	0.83	0.72	0.65	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.167239	NA	NA	NA	NA	NA	0.87	NA	4.2227
1230	11	407708	407708	A	C	intronic	SIGIRR	NA	NA	NA	intronic	ENSG00000185187	NA	NA	NA	NA	NA	11p15.5	NA	Name=Egr-1	NA	NA	rs6421977	0.9	0.9	0.863	0.926717	0.7773	0.998	0.8977	0.9834	0.9509	0.78	1	0.88	0.98	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.65126	NA	NA	NA	NA	NA	0.312	NA	4.2227
1230	14	79176021	79176021	A	T	intronic	NRXN3	NA	NA	NA	ncRNA_intronic	ENSG00000258874	NA	NA	NA	NA	NA	14q24.3	NA	NA	NA	NA	rs71414707	0.02	0.02	0.019	0.0169728	0.0417	NA	0.0288	0.0023	0.0204	0.04	NA	0.04	0.002	0.0294	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.897252	NA	NA	0.039651	0.007263	NA	0.022	NA	4.2225823
1230	12	98711742	98711742	G	A	intergenic	MIR4303,SLC9A7P1	dist=322516;dist=135877	NA	NA	ncRNA_exonic	ENSG00000257580	NA	NA	NA	Score=659;Name=lod=635	NA	12q23.1	NA	NA	NA	NA	rs1351342	0.75	0.75	0.75	0.715855	0.7783	0.9692	0.6297	0.4871	0.7607	0.79	0.97	0.69	0.5	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.737517	1.737517	NA	NA	NA	NA	0.652	NA	4.2217
1230	14	51443968	51443968	C	T	UTR3	TRIM9	NM_015163:c.*41G>A	NA	NA	UTR3	ENSG00000100505	ENST00000298355:c.*41G>A	NA	NA	NA	NA	14q22.1	NA	NA	NA	NA	rs11627694	0.01	0.01	0.009	0.0113818	0.0447	NA	0.013	NA	0.0031	0.04	NA	0.01	NA	0.029	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.101792	3.101792	NA	0.038032	0.007036	NA	NA	NA	4.2216014
1230	4	55604872	55604872	C	T	UTR3	KIT	NM_000222:c.*149C>T,NM_001093772:c.*149C>T	NA	NA	UTR3	ENSG00000157404	ENST00000288135:c.*149C>T,ENST00000412167:c.*149C>T	NA	NA	NA	NA	4q12	NA	NA	NA	NA	rs2213181	0.1	0.1	0.069	0.120607	0.1123	0.0863	0.085	0.1051	0.2106	0.12	0.1	0.08	0.1	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.172897	NA	NA	NA	NA	NA	0.087	NA	4.2210334
1230	3	132409597	132409597	C	A	ncRNA_intronic	NPHP3-ACAD11	NA	NA	NA	intronic	ENSG00000113971	NA	NA	NA	NA	NA	3q22.1	NA	NA	NA	NA	rs62292469	0.1	0.1	0.073	0.0924521	0.1123	0.1151	0.1326	0.0061	0.137	0.13	0.12	0.14	0.01	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.307076	NA	NA	NA	NA	NA	0.051	NA	4.2210333
1230	1	53537266	53537266	G	A	exonic	PODN	NA	synonymous SNV	PODN:NM_153703:exon3:c.G516A:p.T172T,PODN:NM_001199081:exon4:c.G459A:p.T153T,PODN:NM_001199080:exon5:c.G459A:p.T153T	exonic	ENSG00000174348	NA	synonymous SNV	ENSG00000174348:ENST00000312553:exon3:c.G516A:p.T172T,ENSG00000174348:ENST00000371500:exon5:c.G459A:p.T153T	NA	NA	1p32.3	NA	NA	NA	NA	rs1769316	0.55	0.55	0.518	0.55611	0.4652	0.7371	0.6499	0.4977	0.4755	0.46	0.7	0.59	0.48	0.5116	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.911566	NA	NA	0.46907	0.522707	NA	0.645	NA	4.2207966
1230	4	154579875	154579875	A	G	intergenic	KIAA0922,TLR2	dist=22013;dist=25566	NA	NA	ncRNA_exonic	ENSG00000248208	NA	NA	NA	Score=686;Name=lod=818	NA	4q31.3	NA	NA	NA	NA	rs6819254	0.85	0.85	0.841	0.850639	0.7793	0.876	0.8991	0.8563	0.8558	0.79	0.92	0.88	0.84	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.720666	NA	NA	NA	NA	NA	0.884	NA	4.2207
1230	22	22541057	22541057	C	T	intergenic	TOP3B,VPREB1	dist=203910;dist=58143	NA	NA	downstream	ENSG00000236323	NA	NA	NA	Score=669;Name=lod=696	NA	22q11.22	NA	NA	NA	NA	rs5995616	0.39	0.39	0.38	0.40615	0.2793	0.5159	0.4741	0.3079	0.5082	0.28	0.55	0.44	0.35	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.588256	NA	NA	NA	NA	NA	0.239	NA	4.2207
1230	3	42244321	42244321	G	A	exonic	TRAK1	NA	synonymous SNV	TRAK1:NM_001265610:exon12:c.G1599A:p.A533A	exonic	ENSG00000182606	NA	synonymous SNV	ENSG00000182606:ENST00000449246:exon12:c.G1599A:p.A533A	NA	NA	3p22.1	NA	NA	NA	NA	rs9311309	0.79	0.79	0.764	0.74401	0.6988	0.9792	0.8213	0.646	0.6258	0.69	0.99	0.8	0.71	0.7479	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.439668	NA	NA	NA	NA	NA	0.775	NA	4.2199666
1230	2	89292182	89292182	A	G	intergenic	MIR4436A,NONE	dist=180214;dist=NONE	NA	NA	exonic	ENSG00000240671	NA	nonsynonymous SNV	ENSG00000240671:ENST00000495489:exon2:c.T91C:p.F31L	NA	NA	2p11.2	NA	NA	NA	NA	rs59175543	0.36	0.36	0.358	0.361621	0.1759	0.4117	0.3112	0.5121	0.3333	0.18	0.48	0.29	0.54	0.2494	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.509274	NA	NA	0.188266	0.430548	NA	0.188	NA	4.2197674
1230	22	17339844	17339844	T	A	intergenic	HSFY1P1,GAB4	dist=29619;dist=102983	NA	NA	ncRNA_exonic	ENSG00000220248	NA	NA	NA	Score=749;Name=lod=1479	NA	22q11.1	NA	NA	NA	NA	rs165796	0.83	0.83	0.822	0.851038	0.7803	0.871	0.7522	0.944	0.8476	0.77	0.87	0.73	0.95	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.157328	NA	NA	NA	NA	NA	0.87	NA	4.2197
1230	22	22536940	22536940	T	C	intergenic	TOP3B,VPREB1	dist=199793;dist=62260	NA	NA	upstream	ENSG00000253637	NA	NA	NA	NA	NA	22q11.22	NA	Name=eGFP-FOS,ZNF263	NA	NA	rs4145537	0.39	0.39	0.382	0.40635	0.2803	0.5179	0.4741	0.3071	0.5072	0.28	0.55	0.44	0.34	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.004837	NA	NA	NA	NA	NA	0.239	NA	4.2197
1230	20	31386449	31386449	T	C	exonic	DNMT3B	NA	synonymous SNV	DNMT3B:NM_001207056:exon12:c.T1386C:p.Y462Y,DNMT3B:NM_001207055:exon13:c.T1488C:p.Y496Y,DNMT3B:NM_175848:exon14:c.T1614C:p.Y538Y,DNMT3B:NM_175849:exon14:c.T1614C:p.Y538Y,DNMT3B:NM_175850:exon14:c.T1650C:p.Y550Y,DNMT3B:NM_006892:exon15:c.T1674C:p.Y558Y	exonic	ENSG00000088305	NA	synonymous SNV	ENSG00000088305:ENST00000456297:exon12:c.T1386C:p.Y462Y,ENSG00000088305:ENST00000443239:exon13:c.T1488C:p.Y496Y,ENSG00000088305:ENST00000201963:exon14:c.T1650C:p.Y550Y,ENSG00000088305:ENST00000344505:exon14:c.T1614C:p.Y538Y,ENSG00000088305:ENST00000348286:exon14:c.T1614C:p.Y538Y,ENSG00000088305:ENST00000353855:exon14:c.T1614C:p.Y538Y,ENSG00000088305:ENST00000328111:exon15:c.T1674C:p.Y558Y	NA	NA	20q11.21	NA	NA	NA	NA	rs2424922	0.71	0.71	0.716	0.755791	0.4205	0.9931	0.6599	0.913	0.7117	0.43	0.99	0.64	0.88	0.5792	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.053403	NA	NA	0.447674	0.831593	NA	0.616	NA	4.2192926
1230	3	132345482	132345482	G	T	ncRNA_intronic	NPHP3-ACAD11	NA	NA	NA	intronic	ENSG00000113971,ENSG00000240303	NA	NA	NA	NA	NA	3q22.1	NA	NA	NA	NA	rs62291504	0.1	0.1	0.08	0.0940495	0.1143	0.12	0.1297	0.0053	0.1411	0.13	0.12	0.13	0.01	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.167993	NA	NA	NA	NA	NA	0.065	NA	4.2190333
1230	7	76941547	76941547	C	A	intronic	GSAP	NA	NA	NA	intronic	ENSG00000186088	NA	NA	NA	NA	NA	7q11.23	NA	Name=USF-1	NA	NA	rs35791980	0.4	0.4	NA	0.42472	0.3658	0.1359	0.4481	0.6929	0.4039	0.39	0.13	0.46	0.68	0.416	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.336277	NA	NA	NA	NA	NA	0.355	NA	4.2182
1230	13	94047270	94047270	C	T	intronic	GPC6	NA	NA	NA	ncRNA_exonic	ENSG00000235784	NA	NA	NA	NA	NA	13q31.3	NA	NA	NA	NA	rs17234460	0.27	0.27	0.237	0.263379	0.1153	0.4702	0.3343	0.1747	0.272	0.12	0.49	0.32	0.19	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.495413	NA	NA	NA	NA	NA	0.188	NA	4.2180333
1230	16	16162019	16162019	T	C	exonic	ABCC1	NA	synonymous SNV	ABCC1:NM_004996:exon13:c.T1684C:p.L562L	exonic	ENSG00000103222	NA	synonymous SNV	ENSG00000103222:ENST00000345148:exon13:c.T1684C:p.L562L,ENSG00000103222:ENST00000346370:exon13:c.T1684C:p.L562L,ENSG00000103222:ENST00000349029:exon13:c.T1684C:p.L562L,ENSG00000103222:ENST00000351154:exon13:c.T1684C:p.L562L,ENSG00000103222:ENST00000399408:exon13:c.T1684C:p.L562L,ENSG00000103222:ENST00000399410:exon13:c.T1684C:p.L562L	Score=437;Name=lod=80	NA	16p13.11	NA	NA	NA	NA	rs35605	0.82	0.82	0.813	0.786542	0.829	0.8135	0.7824	0.8926	0.5746	0.82	0.77	0.76	0.91	0.7932	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.844904	NA	NA	0.826523	0.88599	NA	0.812	NA	4.2179436
1230	4	1725651	1725651	T	C	intronic	TACC3	NA	NA	NA	intronic	ENSG00000013810	NA	NA	NA	NA	NA	4p16.3	NA	NA	Name=2	NA	rs3099555	0.72	0.72	0.697	0.700479	0.7823	0.8532	0.6916	0.4652	0.7832	0.8	0.87	0.69	0.44	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.603293	NA	NA	NA	NA	NA	0.754	NA	4.2177
1230	5	137426447	137426447	G	A	exonic	WNT8A	NA	synonymous SNV	WNT8A:NM_058244:exon6:c.G741A:p.A247A	exonic	ENSG00000061492	NA	synonymous SNV	ENSG00000061492:ENST00000504809:exon5:c.G795A:p.A265A,ENSG00000061492:ENST00000506684:exon5:c.G795A:p.A265A,ENSG00000061492:ENST00000361560:exon6:c.G741A:p.A247A,ENSG00000061492:ENST00000398754:exon6:c.G741A:p.A247A	NA	NA	5q31.2	NA	NA	NA	NA	rs6596422	0.47	0.47	0.463	0.469649	0.494	0.5843	0.4337	0.3185	0.5562	0.49	0.59	0.41	0.33	0.4815	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.523236	NA	NA	0.474095	0.33224	NA	0.464	NA	4.2170716
1230	10	115348916	115348916	G	A	UTR3	HABP2	NM_001177660:c.*788G>A,NM_004132:c.*788G>A	NA	NA	UTR3	ENSG00000148702	ENST00000542051:c.*788G>A,ENST00000351270:c.*788G>A	NA	NA	NA	NA	10q25.3	NA	NA	NA	NA	rs10885478	0.09	0.09	0.081	0.0858626	0.1173	0.1042	0.072	0.0386	0.1084	0.11	0.11	0.07	0.04	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.764652	NA	NA	NA	NA	NA	0.036	NA	4.2160334
1230	19	58005536	58005536	A	G	UTR3	ZNF419	NM_001098494:c.*78A>G,NM_001098496:c.*78A>G,NM_001098495:c.*78A>G,NM_001098493:c.*78A>G,NM_001098492:c.*78A>G,NM_001098491:c.*78A>G,NM_024691:c.*78A>G	NA	NA	UTR3	ENSG00000105136	ENST00000426954:c.*78A>G,ENST00000442920:c.*78A>G,ENST00000424930:c.*78A>G,ENST00000347466:c.*78A>G,ENST00000415379:c.*78A>G,ENST00000221735:c.*78A>G	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs62126199	0.07	0.07	0.049	0.0820687	0.1173	0.003	0.1859	0.0045	0.1585	0.13	0.0035	0.12	0.01	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.10058	NA	NA	NA	NA	NA	0.058	NA	4.2160334
1230	11	134251777	134251777	C	A	intronic	B3GAT1	NA	NA	NA	intronic	ENSG00000109956	NA	NA	NA	NA	NA	11q25	Score=905;Name=V$YY1_01	NA	NA	NA	rs729687	0.42	0.42	0.365	0.40595	0.3946	0.6677	0.5476	0.0507	0.5276	0.37	0.7	0.54	0.07	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.025962	NA	NA	0.389378	0.117052	NA	0.326	NA	4.216022
1230	19	47980153	47980153	G	A	exonic	KPTN	NA	synonymous SNV	KPTN:NM_007059:exon10:c.C906T:p.P302P	exonic	ENSG00000118162	NA	synonymous SNV	ENSG00000118162:ENST00000595554:exon8:c.C738T:p.P246P,ENSG00000118162:ENST00000338134:exon10:c.C906T:p.P302P,ENSG00000118162:ENST00000536339:exon11:c.C186T:p.P62P	NA	NA	19q13.32	NA	NA	NA	NA	rs2293424	0.4	0.4	0.368	0.346046	0.503	0.5427	0.3775	0.0159	0.4059	0.52	0.56	0.38	0.03	0.4752	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.870513	NA	NA	0.472629	0.097347	NA	0.268	NA	4.2158376
1230	3	96338557	96338557	G	A	intergenic	LOC100287639,EPHA6	dist=936520;dist=194868	NA	NA	ncRNA_exonic	ENSG00000218754	NA	NA	NA	Score=752;Name=lod=1520	NA	3q11.2	NA	NA	NA	NA	rs11713201	0.67	0.67	0.687	0.666733	0.7843	0.7401	0.7233	0.3563	0.8497	0.78	0.75	0.73	0.38	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.109562	NA	NA	NA	NA	NA	0.275	NA	4.2157
1230	11	117008946	117008946	T	C	intergenic	SIK3,PAFAH1B2	dist=39953;dist=6054	NA	NA	ncRNA_exonic	ENSG00000254851	NA	NA	NA	Score=492;Name=lod=133	NA	11q23.3	NA	NA	NA	NA	rs504068	0.53	0.53	0.353	0.519369	0.7843	0.4048	0.6599	0.3684	0.4693	0.73	0.34	0.67	0.32	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.599256	NA	NA	NA	NA	NA	0.486	NA	4.2157
1230	13	25780212	25780212	A	C	intergenic	AMER2,MTMR6	dist=34355;dist=40129	NA	NA	ncRNA_exonic	ENSG00000235315	NA	NA	NA	Score=731;Name=lod=1241	NA	13q12.13	NA	NA	NA	NA	rs4565998	0.63	0.63	0.623	0.617612	0.7843	0.4296	0.683	0.5794	0.6452	0.8	0.42	0.68	0.59	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.070674	NA	NA	NA	NA	NA	0.717	NA	4.2157
1230	21	42840580	42840580	T	C	intronic	TMPRSS2	NA	NA	NA	intronic	ENSG00000184012	NA	NA	NA	NA	NA	21q22.3	NA	NA	Name=4	NA	rs462321	0.57	0.57	0.591	0.578075	0.7843	0.2589	0.5418	0.6074	0.681	0.77	0.27	0.57	0.61	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.548007	NA	NA	NA	NA	NA	0.703	NA	4.2157
1230	19	5208236	5208236	G	A	intronic	PTPRS	NA	NA	NA	intronic	ENSG00000105426	NA	NA	NA	NA	NA	19p13.3	NA	Name=GR	NA	NA	rs55727125	0.26	0.26	0.258	0.274161	0.2624	0.0556	0.3718	0.3797	0.2996	0.26	0.06	0.36	0.39	0.2656	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.212324	NA	NA	0.256512	0.315252	NA	0.188	NA	4.215488
1230	14	101411953	101411953	A	G	upstream	SNORD113-9	NA	NA	NA	ncRNA_intronic	ENSG00000225746	NA	NA	NA	NA	NA	14q32.31	Score=977;Name=V$FOXO1_01	NA	NA	NA	rs12433065	0.33	0.33	0.319	0.361422	0.3101	0.0526	0.4135	0.5968	0.3773	0.31	0.06	0.38	0.62	0.331	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.517398	NA	NA	0.310146	0.535388	NA	0.391	NA	4.2154206
1230	15	78211393	78211393	A	T	ncRNA_exonic	LOC645752	NA	NA	NA	ncRNA_exonic	ENSG00000260776	NA	NA	NA	NA	NA	15q24.3	NA	NA	NA	NA	rs28595390	0.15	0.15	0.136	0.148363	0.2465	0.0526	0.1081	0.1936	0.1135	0.22	0.05	0.11	0.17	0.2049	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.15637	NA	NA	NA	NA	NA	NA	NA	4.2152666
1230	20	17459905	17459905	G	A	intronic	PCSK2	NA	NA	NA	ncRNA_exonic	ENSG00000232241	NA	NA	NA	NA	NA	20p12.1	NA	NA	NA	NA	rs3790337	0.13	0.13	0.126	0.11222	0.1183	0.1518	0.0893	0.121	0.0695	0.13	0.18	0.08	0.13	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.315622	NA	NA	NA	NA	NA	0.101	NA	4.2150333
1230	12	66932832	66932832	T	C	intronic	GRIP1	NA	NA	NA	intronic	ENSG00000155974	NA	NA	NA	NA	NA	12q14.3	NA	Name=c-Jun	NA	NA	rs66522623	0.22	0.22	0.213	0.228435	0.2753	0.1508	0.1816	0.2655	0.2434	0.27	0.16	0.19	0.24	0.2387	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.506025	NA	NA	0.270976	0.264389	NA	0.29	NA	4.215024
1231	22	35590706	35590706	G	A	intergenic	ISX,HMGXB4	dist=107326;dist=62739	NA	NA	ncRNA_exonic	ENSG00000243453	NA	NA	NA	Score=422;Name=lod=69	NA	22q12.3	NA	NA	NA	NA	rs3752596	0.54	0.54	0.488	0.508387	0.7853	0.3879	0.7435	0.1415	0.6769	0.79	0.4	0.73	0.16	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.667103	NA	NA	NA	NA	NA	0.478	NA	4.2147
1231	8	144652281	144652281	T	A	intronic	MROH6	NA	NA	NA	intronic	ENSG00000204839	NA	NA	NA	NA	NA	8q24.3	NA	NA	Name=2	NA	rs11990325	0.24	0.24	0.239	0.279952	0.2525	0.2292	0.2291	0.2126	0.4877	0.26	0.24	0.25	0.2	0.2877	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.047773	NA	NA	0.245288	0.202975	NA	0.275	NA	4.214512
1231	1	17046549	17046549	G	A	ncRNA_exonic	ESPNP	NA	NA	NA	ncRNA_exonic	ENSG00000268869	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs1755332	0.45	0.45	0.44	0.00319489	0.002	0.003	0.0058	0.0053	NA	0.47	0.49	0.46	0.39	0.4503	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.071923	NA	NA	NA	NA	NA	0.319	NA	4.2143666
1231	19	58929136	58929136	G	A	exonic	ZNF584	NA	synonymous SNV	ZNF584:NM_173548:exon4:c.G1251A:p.K417K	exonic	ENSG00000171574	NA	synonymous SNV	ENSG00000171574:ENST00000306910:exon4:c.G1251A:p.K417K,ENSG00000171574:ENST00000593920:exon4:c.G1116A:p.K372K	NA	NA	19q13.43	NA	NA	NA	NA	rs3764534	0.51	0.51	0.531	0.500599	0.497	0.3254	0.379	0.7882	0.3824	0.49	0.32	0.42	0.81	0.4732	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.122344	NA	NA	0.482209	0.766455	ID=COSM1397324;OCCURENCE=1(large_intestine)	0.572	NA	4.2142576
1231	22	17434931	17434931	C	T	intergenic	HSFY1P1,GAB4	dist=124706;dist=7896	NA	NA	intergenic	ENSG00000253481,ENSG00000215568	dist=20038;dist=7895	NA	NA	Score=595;Name=lod=348	NA	22q11.1	NA	NA	NA	NA	rs8138892	0.1	0.1	0.077	0.0902556	0.1193	0.0198	0.1931	0.121	0.0184	0.12	0.03	0.18	0.08	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.588625	NA	NA	NA	NA	NA	0.188	NA	4.2140334
1231	2	232035429	232035429	G	A	UTR3	PSMD1	NM_002807:c.*3G>A,NM_001191037:c.*3G>A	NA	NA	UTR3	ENSG00000173692	ENST00000373635:c.*3G>A,ENST00000308696:c.*3G>A	NA	NA	Score=594;Name=lod=347	NA	2q37.1	NA	NA	NA	NA	rs6749	0.55	0.55	0.55	0.579872	0.3678	0.619	0.3934	0.8828	0.4806	0.37	0.61	0.41	0.86	0.4283	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.883522	NA	NA	0.323256	0.804131	NA	0.58	NA	4.2139774
1231	3	122835210	122835210	A	G	intronic	PDIA5	NA	NA	NA	intronic	ENSG00000065485	NA	NA	NA	NA	NA	3q21.1	NA	Name=Pol2	NA	NA	rs836840	0.69	0.69	0.67	0.66893	0.7863	0.5208	0.7421	0.6876	0.6237	0.77	0.52	0.77	0.7	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.351688	NA	NA	NA	NA	NA	0.761	NA	4.2137
1231	11	549959	549959	C	T	exonic	LRRC56	NA	synonymous SNV	LRRC56:NM_198075:exon7:c.C384T:p.L128L	exonic	ENSG00000161328	NA	synonymous SNV	ENSG00000161328:ENST00000270115:exon7:c.C384T:p.L128L	NA	NA	11p15.5	Score=797;Name=V$ER_Q6	NA	NA	NA	rs7942030	0.8	0.8	0.796	0.78115	0.8201	0.9196	0.8415	0.6203	0.773	0.82	0.91	0.81	0.63	0.812	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.400543	NA	NA	0.821237	0.652973	NA	0.659	NA	4.2133296
1231	1	92979354	92979354	A	G	exonic	EVI5	NA	synonymous SNV	EVI5:NM_005665:exon18:c.T2292C:p.G764G	exonic	ENSG00000067208	NA	synonymous SNV	ENSG00000067208:ENST00000370331:exon18:c.T2292C:p.G764G,ENSG00000067208:ENST00000540033:exon18:c.T2292C:p.G764G,ENSG00000067208:ENST00000543509:exon19:c.T2325C:p.G775G	NA	NA	1p22.1	Score=811;Name=V$GFI1_01	NA	NA	NA	rs6603979	0.89	0.89	0.906	0.920327	0.8072	0.9752	0.8905	0.9508	0.9601	0.81	0.97	0.86	0.95	0.852	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.774577	NA	NA	0.794186	0.924648	NA	0.826	NA	4.2132806
1231	15	40630913	40630913	C	T	intronic	C15orf52	NA	NA	NA	intronic	ENSG00000188549	NA	NA	NA	NA	NA	15q15.1	NA	Name=ZNF263	NA	NA	rs72733403	0.15	0.15	0.153	0.157748	0.2853	0.0407	0.1772	0.0983	0.2137	0.29	0.03	0.16	0.09	0.2292	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.088639	NA	NA	0.272514	0.110256	NA	0.304	NA	4.212986
1231	4	96256673	96256673	G	A	exonic	UNC5C	NA	synonymous SNV	UNC5C:NM_003728:exon2:c.C234T:p.P78P	exonic	ENSG00000182168	NA	synonymous SNV	ENSG00000182168:ENST00000453304:exon2:c.C234T:p.P78P,ENSG00000182168:ENST00000504962:exon2:c.C234T:p.P78P,ENSG00000182168:ENST00000506749:exon2:c.C234T:p.P78P,ENSG00000182168:ENST00000513796:exon2:c.C234T:p.P78P	Score=655;Name=lod=614	NA	4q22.3	NA	NA	NA	NA	rs1843018	0.81	0.81	0.801	0.810104	0.8131	1	0.8545	0.5779	0.8937	0.82	1	0.84	0.57	0.8229	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.122429	NA	NA	0.817981	0.647753	NA	0.79	NA	4.2126856
1231	3	184072459	184072459	G	A	intronic	CLCN2	NA	NA	NA	intronic	ENSG00000114859,ENSG00000145191	NA	NA	NA	Score=571;Name=lod=280	NA	3q27.1	NA	NA	NA	NA	rs73189624	0.14	0.14	0.163	0.154553	0.2793	0.0456	0.1715	0.0666	0.2454	0.26	0.02	0.22	0.06	0.2224	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.210495	NA	NA	0.285764	0.087006	NA	0.304	NA	4.212536
1231	17	37202047	37202047	T	G	ncRNA_intronic	LRRC37A11P	NA	NA	NA	ncRNA_intronic	ENSG00000214553	NA	NA	NA	NA	NA	17q12	NA	NA	NA	NA	rs9911197	0.38	0.38	0.36	0.365415	0.4543	0.2153	0.4107	0.3933	0.3589	0.45	0.22	0.47	0.38	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.482677	NA	NA	NA	NA	NA	0.391	NA	4.2123666
1231	21	15323631	15323631	C	T	ncRNA_intronic	ANKRD20A11P	NA	NA	NA	ncRNA_intronic	ENSG00000215559	NA	NA	NA	NA	NA	21q11.2	NA	NA	NA	NA	rs28715238	0.43	0.43	0.412	0.447284	0.4543	0.3899	0.536	0.3835	0.5225	0.46	0.38	0.5	0.39	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.433274	NA	NA	NA	NA	NA	0.094	NA	4.2123666
1231	21	18938080	18938080	G	T	UTR3	CXADR	NM_001207065:c.*275G>T,NM_001207064:c.*147G>T,NM_001207063:c.*147G>T,NM_001338:c.*70G>T	NA	NA	UTR3	ENSG00000154639	ENST00000284878:c.*70G>T,ENST00000400166:c.*147G>T	NA	NA	NA	NA	21q21.1	NA	NA	NA	NA	rs1784913	0.08	0.08	0.08	0.086262	0.1213	0.002	0.1023	0.1316	0.0644	0.1	0.0017	0.11	0.14	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.571865	1.571865	NA	NA	NA	NA	0.116	NA	4.2120334
1231	17	44788310	44788310	G	A	intronic	NSF	NA	NA	NA	intronic	ENSG00000073969	NA	NA	NA	NA	Name=Parkinson's disease,Ovarian cancer in BRCA1 mutation carriers	17q21.31	NA	NA	NA	NA	rs183211	0.41	0.41	0.409	0.36222	0.2584	0.5873	0.4323	0.3979	0.1391	0.25	0.63	0.4	0.42	0.2847	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.846655	NA	NA	0.244925	0.389431	NA	0.225	NA	4.211975
1231	6	514855	514855	G	A	intronic	EXOC2	NA	NA	NA	intronic	ENSG00000112685	NA	NA	NA	NA	NA	6p25.3	NA	NA	Name=8	NA	rs2493012	0.78	0.78	0.76	0.767971	0.7883	0.9474	0.6801	0.5809	0.8773	0.78	0.97	0.74	0.6	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.721609	NA	NA	NA	NA	NA	0.783	NA	4.2117
1231	10	63699895	63699895	A	C	intronic	ARID5B	NA	NA	NA	intronic	ENSG00000150347	NA	NA	NA	NA	NA	10q21.2	NA	Name=MEF2A,Pol2-4H8	Name=117	NA	rs7073837	0.64	0.64	0.65	0.585663	0.6064	0.6429	0.4942	0.7368	0.3661	0.62	0.65	0.52	0.76	0.5842	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.816403	NA	NA	0.597791	0.72197	NA	0.652	NA	4.211609
1231	20	30135990	30135990	A	G	ncRNA_exonic	PSIMCT-1	NA	NA	NA	intronic	ENSG00000101294	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs1115713	0.2	0.2	0.205	0.196885	0.1223	0.001	0.1427	0.553	0.0327	0.12	NA	0.14	0.57	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.523108	NA	NA	NA	NA	NA	0.181	NA	4.2110333
1231	19	54725995	54725995	G	A	exonic	LILRB3	NA	synonymous SNV	LILRB3:NM_001081450:exon4:c.C363T:p.Y121Y,LILRB3:NM_006864:exon4:c.C363T:p.Y121Y	exonic	ENSG00000204577	NA	synonymous SNV	ENSG00000204577:ENST00000245620:exon4:c.C363T:p.Y121Y,ENSG00000204577:ENST00000346401:exon4:c.C363T:p.Y121Y,ENSG00000204577:ENST00000407860:exon4:c.C363T:p.Y121Y,ENSG00000204577:ENST00000414379:exon4:c.C363T:p.Y121Y,ENSG00000204577:ENST00000424807:exon4:c.C363T:p.Y121Y,ENSG00000204577:ENST00000445347:exon4:c.C363T:p.Y121Y,ENSG00000204577:ENST00000391750:exon5:c.C363T:p.Y121Y	NA	NA	19q13.42	NA	NA	NA	NA	rs61187720	0.71	0.71	0.676	0.673323	0.7018	0.7083	0.7046	0.7035	0.545	0.76	0.69	0.67	0.7	0.7539	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.739081	NA	NA	NA	NA	ID=COSM1129724;OCCURENCE=1(prostate)	0.275	NA	4.2109666
1231	9	2811505	2811505	G	A	exonic	KIAA0020	NA	synonymous SNV	KIAA0020:NM_014878:exon15:c.C1491T:p.H497H	exonic	ENSG00000080608	NA	synonymous SNV	ENSG00000080608:ENST00000397885:exon15:c.C1491T:p.H497H	NA	NA	9p24.2	NA	NA	NA	NA	rs2270888	0.4	0.4	0.384	0.413738	0.4742	0.496	0.3746	0.2035	0.5787	0.46	0.5	0.39	0.21	0.4817	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.336829	NA	NA	0.5	0.258057	NA	0.29	NA	4.2107666
1231	14	24649835	24649835	T	C	intronic	IPO4	NA	NA	NA	intronic	ENSG00000196497,ENSG00000259522	NA	NA	NA	NA	NA	14q12	NA	Name=Pol2-4H8	NA	NA	rs2273911	0.58	0.58	0.598	0.594249	0.4076	0.748	0.3602	0.8064	0.5072	0.41	0.78	0.37	0.78	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.317605	NA	NA	0.381835	0.717486	NA	0.522	NA	4.210565
1231	22	43831056	43831056	C	T	exonic	MPPED1	NA	synonymous SNV	MPPED1:NM_001044370:exon3:c.C327T:p.Y109Y	exonic	ENSG00000186732	NA	synonymous SNV	ENSG00000186732:ENST00000414469:exon2:c.C9T:p.Y3Y,ENSG00000186732:ENST00000334209:exon3:c.C327T:p.Y109Y,ENSG00000186732:ENST00000417669:exon3:c.C327T:p.Y109Y,ENSG00000186732:ENST00000443721:exon3:c.C327T:p.Y109Y,ENSG00000186732:ENST00000538182:exon3:c.C426T:p.Y142Y,ENSG00000186732:ENST00000542779:exon3:c.C327T:p.Y109Y	NA	NA	22q13.2	NA	NA	NA	NA	rs4331615	0.37	0.37	0.396	0.355431	0.4861	0.0873	0.3919	0.4206	0.3834	0.48	0.1	0.43	0.47	0.4492	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.660092	NA	NA	0.520991	0.409413	NA	0.428	NA	4.2103756
1231	1	111825883	111825883	T	C	ncRNA_intronic	CHIAP2	NA	NA	NA	ncRNA_intronic	ENSG00000203878	NA	NA	NA	NA	NA	1p13.2	NA	NA	NA	NA	rs4406629	0.47	0.47	0.401	0.439896	0.4563	0.6954	0.6282	0.1573	0.408	0.45	0.66	0.61	0.16	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.741953	NA	NA	NA	NA	NA	0.297	NA	4.2103666
1231	1	205568390	205568390	T	A	intronic	MFSD4	NA	NA	NA	intronic	ENSG00000174514	NA	NA	NA	NA	NA	1q32.1	NA	NA	Name=15	NA	rs2282450	0.4	0.4	0.386	0.44389	0.2157	0.6458	0.4251	0.4259	0.5082	0.23	0.61	0.36	0.45	0.3333	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.296465	1.296465	NA	0.240814	0.405129	NA	0.42	NA	4.210186
1231	9	133911598	133911598	A	G	exonic	LAMC3	NA	synonymous SNV	LAMC3:NM_006059:exon4:c.A855G:p.A285A	exonic	ENSG00000050555	NA	synonymous SNV	ENSG00000050555:ENST00000361069:exon4:c.A855G:p.A285A	NA	NA	9q34.12	NA	NA	NA	NA	rs2275132	0.85	0.85	0.892	0.848243	0.8181	0.8343	0.853	0.9622	0.7362	0.81	0.82	0.84	0.95	0.806	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.780975	NA	NA	0.83239	0.947113	NA	0.812	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117481.2;CLNDSDB=.;CLNDSDBID=.	4.2101766
1231	18	5292030	5292030	A	G	exonic	ZBTB14	NA	synonymous SNV	ZBTB14:NM_003409:exon3:c.T177C:p.T59T,ZBTB14:NM_001143823:exon4:c.T177C:p.T59T,ZBTB14:NM_001243702:exon4:c.T177C:p.T59T,ZBTB14:NM_001243704:exon4:c.T177C:p.T59T	exonic	ENSG00000198081	NA	synonymous SNV	ENSG00000198081:ENST00000400143:exon3:c.T177C:p.T59T,ENSG00000198081:ENST00000357006:exon4:c.T177C:p.T59T,ENSG00000198081:ENST00000578327:exon4:c.T177C:p.T59T,ENSG00000198081:ENST00000582135:exon4:c.T177C:p.T59T,ENSG00000198081:ENST00000582388:exon4:c.T177C:p.T59T	Score=591;Name=lod=337	NA	18p11.31	NA	NA	NA	NA	rs620652	0.84	0.84	0.842	0.84345	0.8032	0.8254	0.8401	0.9251	0.7955	0.82	0.81	0.81	0.93	0.8255	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.53409	NA	NA	0.828256	0.924648	NA	0.928	NA	4.2097106
1231	14	103841018	103841018	A	G	intergenic	EIF5,MARK3	dist=29657;dist=10683	NA	NA	ncRNA_exonic	ENSG00000243904	NA	NA	NA	Score=801;Name=lod=2389	NA	14q32.32	NA	NA	NA	NA	rs6575979	0.71	0.71	0.728	0.666933	0.7903	0.5655	0.7334	0.6649	0.6002	0.8	0.55	0.75	0.74	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.170446	NA	NA	NA	NA	NA	0.688	NA	4.2097
1231	15	48541700	48541700	G	A	intronic	SLC12A1	NA	NA	NA	intronic	ENSG00000074803	NA	NA	NA	Score=478;Name=lod=117	NA	15q21.1	NA	NA	NA	NA	rs2279365	0.53	0.53	0.515	0.49401	0.7903	0.4355	0.6354	0.1475	0.6176	0.8	0.4	0.69	0.16	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.200175	NA	NA	NA	NA	NA	0.507	NA	4.2097
1231	22	42072912	42072912	C	A	intronic	NHP2L1	NA	NA	NA	intronic	ENSG00000100138	NA	NA	NA	Score=544;Name=lod=216	NA	22q13.2	NA	NA	NA	NA	rs1807497	0.78	0.78	0.826	0.777756	0.7903	0.9087	0.5115	0.9175	0.6299	0.77	0.9	0.52	0.86	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.407378	NA	NA	NA	NA	NA	0.833	NA	4.2097
1231	6	29068759	29068759	C	A	intergenic	OR2B3,OR2J3	dist=13669;dist=10909	NA	NA	exonic	ENSG00000204702	NA	nonsynonymous SNV	ENSG00000204702:ENST00000377171:exon1:c.C40A:p.L14I	NA	NA	6p22.1	NA	NA	NA	NA	rs3131087	0.71	0.71	0.715	0.71246	0.8191	0.6071	0.7161	0.6475	0.7965	0.84	0.58	0.7	0.67	0.8046	0.84	1	T	.	.	.	.	.	.	1.000	P	.	.	7.33	T	-1.057	T	0.000	T	0.111	-1.962	0.007	-1.28	-0.831	0.382	5.341	-1.961588	NA	1	NA	NA	NA	0.754	NA	4.2096334
1231	11	61249383	61249383	C	A	exonic	PPP1R32	NA	synonymous SNV	PPP1R32:NM_001170753:exon2:c.C102A:p.T34T,PPP1R32:NM_145017:exon2:c.C102A:p.T34T	exonic	ENSG00000162148	NA	synonymous SNV	ENSG00000162148:ENST00000338608:exon2:c.C102A:p.T34T,ENSG00000162148:ENST00000432063:exon2:c.C102A:p.T34T	Score=469;Name=lod=107	NA	11q12.2	NA	NA	NA	NA	rs3019200	0.8	0.8	0.801	0.775559	0.826	0.9732	0.8458	0.5008	0.8415	0.82	0.97	0.85	0.52	0.8139	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.132821	NA	NA	0.817283	0.534514	NA	0.732	NA	4.2094836
1231	11	113270374	113270374	C	T	exonic	ANKK1	NA	synonymous SNV	ANKK1:NM_178510:exon8:c.C1683T:p.Y561Y	exonic	ENSG00000170209	NA	synonymous SNV	ENSG00000170209:ENST00000303941:exon8:c.C1683T:p.Y561Y	Score=374;Name=lod=44	NA	11q23.2	NA	NA	NA	NA	rs2734848	0.8	0.8	0.762	0.769369	0.8161	0.9514	0.8473	0.5242	0.8098	0.81	0.96	0.83	0.57	0.8205	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.418778	NA	NA	0.820601	0.626072	NA	0.681	NA	4.2094656
1231	7	131866972	131866972	A	G	intronic	PLXNA4	NA	NA	NA	intronic	ENSG00000221866	NA	NA	NA	Score=300;Name=lod=22	NA	7q32.3	NA	NA	NA	NA	rs3734983	0.28	0.28	0.245	0.276358	0.2614	0.2579	0.4207	0.2526	0.2403	0.26	0.26	0.39	0.25	0.2747	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.558712	NA	NA	0.254487	0.243062	NA	0.217	NA	4.209413
1231	9	136083580	136083580	T	G	exonic	OBP2B	NA	synonymous SNV	OBP2B:NM_014581:exon3:c.A217C:p.R73R	exonic;splicing	ENSG00000171102;ENSG00000171102	ENST00000372032:exon4:c.85-2A>C	synonymous SNV	ENSG00000171102:ENST00000372034:exon3:c.A217C:p.R73R,ENSG00000171102:ENST00000473737:exon3:c.A217C:p.R73R	NA	NA	9q34.2	NA	NA	NA	NA	rs2073870	0.7	0.7	0.762	0.73722	0.837	0.6607	0.8429	0.7481	0.6237	0.79	0.61	0.81	0.59	0.7843	0.84	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	.	.	.	.	.	-0.279	2.664	0.93	-0.059	-0.862	6.188	-0.279128	NA	NA	0.836008	0.763277	NA	0.42	NA	4.2093586
1231	10	96748893	96748893	C	G	UTR3	CYP2C9	NM_000771:c.*108C>G	NA	NA	UTR3	ENSG00000138109	ENST00000260682:c.*108C>G	NA	NA	NA	NA	10q23.33	NA	NA	NA	NA	rs9332242	0.07	0.07	0.054	0.0479233	0.1243	0.001	0.0994	0.0083	0.0348	0.12	0.0035	0.12	0.02	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.08992	NA	NA	NA	NA	NA	0.094	NA	4.2090334
1231	17	9756171	9756171	A	T	intronic	GLP2R	NA	NA	NA	ncRNA_exonic	ENSG00000265593	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs8074914	0.25	0.25	0.223	0.276558	0.1243	0.2877	0.268	0.3805	0.2873	0.11	0.28	0.23	0.42	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.077725	NA	NA	NA	NA	NA	0.29	NA	4.2090333
1231	6	90459454	90459454	G	A	exonic	MDN1	NA	synonymous SNV	MDN1:NM_014611:exon25:c.C3423T:p.A1141A	exonic	ENSG00000112159	NA	synonymous SNV	ENSG00000112159:ENST00000439638:exon23:c.C3204T:p.A1068A,ENSG00000112159:ENST00000369393:exon25:c.C3423T:p.A1141A,ENSG00000112159:ENST00000428876:exon25:c.C3423T:p.A1141A	Score=618;Name=lod=435	NA	6q15	NA	NA	NA	NA	rs4053618	0.88	0.88	0.885	0.845248	0.8131	0.9187	0.8703	0.9221	0.681	0.83	0.93	0.87	0.92	0.8248	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.735502	NA	NA	0.819884	0.912392	NA	0.833	NA	4.2088826
1231	4	106024361	106024361	A	G	intergenic	CXXC4,TET2	dist=608303;dist=42671	NA	NA	ncRNA_exonic	ENSG00000251473	NA	NA	NA	Score=648;Name=lod=572	NA	4q24	NA	NA	NA	NA	rs7668143	0.89	0.89	0.898	0.858027	0.7913	0.9544	0.8213	0.9766	0.6933	0.79	0.96	0.84	0.98	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.319114	NA	NA	NA	NA	NA	0.826	NA	4.2087
1231	6	160133957	160133957	G	A	intergenic	SOD2,WTAP	dist=19604;dist=14073	NA	NA	ncRNA_exonic	ENSG00000220305	NA	NA	NA	Score=601;Name=lod=371	NA	6q25.3	NA	NA	NA	NA	rs752779	0.72	0.72	0.717	0.743011	0.7913	0.5903	0.8689	0.6793	0.8476	0.8	0.57	0.86	0.68	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.015424	NA	NA	NA	NA	NA	0.63	NA	4.2087
1231	3	42784216	42784216	A	G	ncRNA_intronic	CCDC13-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000173811	NA	NA	NA	NA	NA	3p22.1	NA	NA	NA	NA	rs12054446	0.48	0.48	0.482	0.501198	0.4583	0.4534	0.4006	0.5446	0.6074	0.46	0.47	0.46	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.659567	NA	NA	NA	NA	NA	0.486	NA	4.2083666
1231	19	29873579	29873579	C	A	ncRNA_intronic	LOC284395	NA	NA	NA	ncRNA_intronic	ENSG00000264515	NA	NA	NA	NA	NA	19q12	NA	NA	NA	NA	rs4804878	0.49	0.49	0.501	0.452875	0.4583	0.5625	0.389	0.4887	0.3313	0.47	0.57	0.38	0.5	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.809237	NA	NA	NA	NA	NA	0.522	NA	4.2083666
1231	16	77323093	77323093	A	G	intronic	ADAMTS18	NA	NA	NA	ncRNA_intronic	ENSG00000260922	NA	NA	NA	NA	NA	16q23.1	NA	NA	NA	NA	rs68045879	0.17	0.17	0.168	0.18151	0.1252	0.2202	0.1254	0.2632	0.1288	0.11	0.19	0.15	0.28	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.067954	NA	NA	NA	NA	NA	0.181	NA	4.2081333
1231	14	106092152	106092152	G	A	intergenic	TMEM121,ELK2AP	dist=95613;dist=43762	NA	NA	exonic	ENSG00000211892	NA	synonymous SNV	ENSG00000211892:ENST00000390543:exon1:c.C252T:p.N84N	Score=251;Name=lod=14	NA	14q32.33	NA	NA	NA	NA	rs10137020	0.29	0.29	0.272	0.298323	0.4394	0.5188	0.2637	0.0265	0.318	0.43	0.34	0.28	0.04	0.3945	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.514754	NA	NA	0.458118	0.096063	NA	0.174	NA	4.207982
1231	9	130210946	130210946	A	G	intronic	RPL12	NA	NA	NA	intronic	ENSG00000197958	NA	NA	NA	NA	NA	9q33.3	NA	Name=Pol2-4H8,Pol2,Pol2(phosphoS2)	Name=60	NA	rs2247573	0.55	0.55	0.538	0.522764	0.6322	0.3681	0.6455	0.5151	0.4928	0.64	0.37	0.61	0.56	0.5768	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.128343	NA	NA	0.583124	0.554795	NA	0.457	NA	4.207876
1231	4	104493864	104493864	A	T	intergenic	CENPE,TACR3	dist=374298;dist=16761	NA	NA	ncRNA_exonic	ENSG00000251571	NA	NA	NA	Score=766;Name=lod=1724	NA	4q24	NA	NA	NA	NA	rs2588908	0.59	0.59	0.552	0.531749	0.7922	0.5139	0.6945	0.2572	0.5378	0.8	0.52	0.74	0.25	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.112842	NA	NA	NA	NA	NA	0.565	NA	4.2078
1231	16	55813600	55813600	T	C	intergenic	CES1P1,CES1	dist=4774;dist=23164	NA	NA	ncRNA_intronic	ENSG00000228695	NA	NA	NA	NA	NA	16q12.2	NA	Name=Pol2	NA	NA	rs28538101	0.63	0.63	0.643	0.654752	0.7922	0.3651	0.7032	0.7511	0.6472	0.73	0.35	0.71	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.012713	NA	NA	NA	NA	NA	0.623	NA	4.2078
1231	6	144870040	144870040	T	C	intronic	UTRN	NA	NA	NA	intronic	ENSG00000152818	NA	NA	NA	NA	NA	6q24.2	NA	Name=GATA-2	NA	NA	rs1534442	0.36	0.36	0.364	0.370607	0.2515	0.5952	0.2147	0.3238	0.4356	0.24	0.62	0.24	0.33	0.3063	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.148763	NA	NA	0.234473	0.29301	NA	0.268	NA	4.207727
1231	3	42784630	42784630	A	G	ncRNA_intronic	CCDC13-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000173811	NA	NA	NA	NA	NA	3p22.1	NA	NA	NA	NA	rs12635736	0.5	0.5	0.49	0.523762	0.4592	0.4643	0.4078	0.6172	0.6074	0.46	0.48	0.47	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.619284	NA	NA	NA	NA	NA	0.478	NA	4.2074666
1231	9	125391409	125391409	A	G	exonic	OR1B1	NA	synonymous SNV	OR1B1:NM_001004450:exon1:c.T406C:p.L136L	exonic	ENSG00000171484	NA	synonymous SNV	ENSG00000171484:ENST00000304833:exon1:c.T406C:p.L136L	NA	NA	9q33.2	NA	NA	NA	NA	rs1536928	0.41	0.41	0.44	0.410144	0.504	0.3403	0.2954	0.3896	0.4949	0.51	0.37	0.33	0.37	0.4583	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.764488	NA	NA	0.497093	0.433954	NA	0.58	NA	4.2072736
1231	11	804212	804212	C	A	exonic	PIDD	NA	synonymous SNV	PIDD:NM_145886:exon2:c.G177T:p.L59L,PIDD:NM_145887:exon2:c.G177T:p.L59L	exonic	ENSG00000177595	NA	synonymous SNV	ENSG00000177595:ENST00000411829:exon1:c.G177T:p.L59L,ENSG00000177595:ENST00000524486:exon1:c.G177T:p.L59L,ENSG00000177595:ENST00000525028:exon1:c.G177T:p.L59L,ENSG00000177595:ENST00000347755:exon2:c.G177T:p.L59L	NA	NA	11p15.5	NA	NA	NA	NA	rs7104785	0.43	0.43	0.396	0.350839	0.493	0.2728	0.6354	0.292	0.1626	0.5	0.32	0.61	0.3	0.4548	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.634018	NA	NA	0.51198	0.316841	NA	0.167	NA	4.2068866
1231	4	104495075	104495075	C	T	intergenic	CENPE,TACR3	dist=375509;dist=15550	NA	NA	ncRNA_exonic	ENSG00000251571	NA	NA	NA	Score=740;Name=lod=1356	NA	4q24	NA	NA	NA	NA	rs2588910	0.59	0.59	0.556	0.53115	0.7932	0.5129	0.6902	0.2542	0.5419	0.8	0.52	0.73	0.24	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.476083	NA	NA	NA	NA	NA	0.565	NA	4.2068
1231	4	104495147	104495147	A	C	intergenic	CENPE,TACR3	dist=375581;dist=15478	NA	NA	ncRNA_exonic	ENSG00000251571	NA	NA	NA	Score=641;Name=lod=538	NA	4q24	NA	NA	NA	NA	rs2757675	0.59	0.59	0.508	0.531749	0.7932	0.5149	0.6902	0.2534	0.544	0.8	0.53	0.73	0.24	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.671429	NA	NA	NA	NA	NA	0.5	NA	4.2068
1231	18	41901924	41901924	A	G	intergenic	SYT4,SETBP1	dist=1044309;dist=358214	NA	NA	ncRNA_exonic	ENSG00000267573	NA	NA	NA	Score=689;Name=lod=842	NA	18q12.3	NA	NA	NA	NA	rs7236406	0.71	0.71	0.698	0.66893	0.7932	0.8869	0.6643	0.382	0.7076	0.8	0.87	0.69	0.41	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.517192	NA	NA	NA	NA	NA	0.681	NA	4.2068
1231	14	25101397	25101397	A	G	intronic	GZMB	NA	NA	NA	ncRNA_intronic	ENSG00000258657	NA	NA	NA	NA	NA	14q12	NA	NA	NA	NA	rs71405867	0.12	0.12	0.06	0.127796	0.1272	0.1736	0.1023	0.0779	0.1667	0.13	0.15	0.1	0.07	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.269995	NA	NA	NA	NA	NA	0.123	NA	4.2061333
1231	13	25525544	25525544	T	C	ncRNA_exonic	TPTE2P1	NA	NA	NA	ncRNA_exonic	ENSG00000253771	NA	NA	NA	NA	NA	13q12.13	NA	NA	NA	NA	rs41288282	0.2	0.2	0.194	0.244209	0.2406	0.0853	0.1614	0.3154	0.3742	0.22	0.09	0.2	0.29	0.2202	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.347741	NA	0.54	NA	NA	NA	0.21	NA	4.2058666
1231	4	104495125	104495125	A	G	intergenic	CENPE,TACR3	dist=375559;dist=15500	NA	NA	ncRNA_exonic	ENSG00000251571	NA	NA	NA	Score=309;Name=lod=24	NA	4q24	NA	NA	NA	NA	rs2757676	0.6	0.6	0.549	0.548323	0.7942	0.5139	0.696	0.3169	0.5389	0.8	0.52	0.74	0.29	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.057659	NA	NA	NA	NA	NA	0.536	NA	4.2058
1231	8	12232269	12232269	T	C	ncRNA_intronic	FAM66A	NA	NA	NA	ncRNA_exonic	ENSG00000254423	NA	NA	NA	NA	NA	8p23.1	NA	NA	NA	NA	rs2684054	0.44	0.44	0.454	0.446486	0.4612	0.3522	0.3833	0.5688	0.408	0.44	0.34	0.39	0.59	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.589032	NA	NA	NA	NA	NA	0.37	NA	4.2054666
1231	20	49620783	49620783	G	T	exonic	KCNG1	NA	synonymous SNV	KCNG1:NM_002237:exon3:c.C1335A:p.I445I	exonic	ENSG00000026559	NA	synonymous SNV	ENSG00000026559:ENST00000371571:exon3:c.C1335A:p.I445I	Score=585;Name=lod=319	NA	20q13.13	NA	NA	NA	NA	rs1054268	0.67	0.67	0.656	0.642372	0.8529	0.6558	0.8372	0.3048	0.7301	0.85	0.65	0.82	0.32	0.7679	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.262326	2.262326	NA	0.840465	0.405356	ID=COSM1412447;OCCURENCE=1(large_intestine)	0.572	NA	4.2054016
1231	11	128773413	128773413	T	C	intronic	C11orf45,KCNJ5	NA	NA	NA	intronic	ENSG00000120457,ENSG00000174370	NA	NA	NA	NA	NA	11q24.3	NA	Name=SUZ12	NA	NA	rs4937387	0.23	0.23	0.234	0.210264	0.2843	0.1042	0.1974	0.2451	0.2055	0.29	0.13	0.2	0.28	0.2441	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.441045	NA	NA	0.266232	0.279191	NA	0.196	NA	4.205368
1231	22	50211295	50211295	G	A	intronic	BRD1	NA	NA	NA	ncRNA_exonic	ENSG00000236867	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs138872	0.19	0.19	0.204	0.198083	0.1282	0.1409	0.1081	0.3782	0.1493	0.14	0.14	0.12	0.36	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.086929	NA	NA	NA	NA	NA	0.333	NA	4.2051333
1232	19	15881953	15881953	A	G	ncRNA_exonic	CYP4F24P	NA	NA	NA	ncRNA_exonic	ENSG00000267594	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs4807986	0.64	0.64	0.613	0.651757	0.7614	0.3313	0.5922	0.795	0.7178	0.76	0.35	0.65	0.79	0.7003	0.79	1	T	0.0	B	0.002	B	.	.	.	.	.	.	.	.	-0.955	T	0.000	T	.	-3.663	0.001	-0.283	-0.312	-0.155	2.652	-3.662979	NA	1	NA	NA	NA	0.674	NA	4.2049666
1232	X	15711209	15711209	C	T	ncRNA_intronic	CA5BP1	NA	NA	NA	ncRNA_intronic	ENSG00000186312	NA	NA	NA	NA	NA	Xp22.2	NA	NA	NA	NA	rs1996225	0.64	0.64	0.63831	NA	NA	NA	NA	NA	NA	0.49	0.87	0.62	0.63	0.4617	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.207974	NA	NA	NA	NA	NA	0.326	NA	4.2049666
1232	20	24993414	24993414	T	C	intronic	ACSS1	NA	NA	NA	intronic	ENSG00000154930	NA	NA	NA	NA	NA	20p11.21	NA	Name=c-Jun	NA	NA	rs6132785	0.27	0.27	0.264	0.259984	0.2674	0.0645	0.2262	0.4826	0.1769	0.26	0.08	0.27	0.49	0.244	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.04111	NA	NA	0.283721	0.482297	NA	0.239	NA	4.204879
1232	12	11175087	11175087	G	A	exonic	TAS2R19	NA	synonymous SNV	TAS2R19:NM_176888:exon1:c.C84T:p.A28A	exonic	ENSG00000212124	NA	synonymous SNV	ENSG00000212124:ENST00000390673:exon1:c.C84T:p.A28A	NA	NA	12p13.2	NA	NA	NA	NA	rs12313469	0.4	0.4	0.414	0.351837	0.5109	0.1944	0.4669	0.3601	0.2577	0.53	0.22	0.44	0.37	0.4456	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.032566	NA	NA	0.505349	0.379029	NA	0.413	NA	4.2048176
1232	7	87138645	87138645	A	G	exonic	ABCB1	NA	synonymous SNV	ABCB1:NM_000927:exon27:c.T3435C:p.I1145I	exonic	ENSG00000085563	NA	synonymous SNV	ENSG00000085563:ENST00000543898:exon24:c.T3243C:p.I1081I,ENSG00000085563:ENST00000265724:exon27:c.T3435C:p.I1145I	NA	NA	7q21.12	NA	NA	NA	NA	rs1045642	0.6	0.6	0.619	0.604832	0.4821	0.6022	0.572	0.8502	0.4254	0.47	0.6	0.54	0.85	0.5034	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.40149	NA	NA	0.476395	0.772356	NA	0.587	NA	4.2047716
1232	4	15964763	15964763	C	T	UTR5	FGFBP2	NM_031950:c.-11G>A	NA	NA	UTR5;UTR3	ENSG00000137441;ENSG00000007062	ENST00000259989:c.-11G>A;ENST00000503884:c.*361G>A	NA	NA	NA	NA	4p15.32	NA	Name=CTCF	NA	NA	rs4698432	0.3	0.3	0.255	0.345647	0.3618	0.2857	0.5043	0.1339	0.5644	0.34	0.25	0.48	0.16	0.3931	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.550741	NA	NA	0.373721	0.192692	NA	0.435	NA	4.2047124
1232	3	186370333	186370333	G	T	exonic	FETUB	NA	synonymous SNV	FETUB:NM_014375:exon7:c.G1062T:p.V354V	exonic	ENSG00000090512	NA	synonymous SNV	ENSG00000090512:ENST00000382134:exon5:c.G867T:p.V289V,ENSG00000090512:ENST00000539949:exon5:c.G618T:p.V206V,ENSG00000090512:ENST00000382136:exon6:c.G951T:p.V317V,ENSG00000090512:ENST00000265029:exon7:c.G1062T:p.V354V,ENSG00000090512:ENST00000450521:exon8:c.G1062T:p.V354V	NA	NA	3q27.3	NA	NA	NA	NA	rs1131364	0.63	0.63	0.663	0.655751	0.4592	0.746	0.5879	0.798	0.6207	0.46	0.73	0.62	0.78	0.5402	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.627915	NA	NA	0.462558	0.730595	NA	0.688	NA	4.2047086
1232	2	97712339	97712339	C	A	intergenic	FAM178B,FAHD2B	dist=60038;dist=36984	NA	NA	ncRNA_exonic	ENSG00000270748	NA	NA	NA	Score=333;Name=lod=30	NA	2q11.2	NA	NA	NA	NA	rs1257117	0.45	0.45	0.369	0.349241	0.7962	0.251	0.4611	0.0802	0.2751	0.78	0.29	0.51	0.09	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.978055	NA	NA	NA	NA	NA	0.08	NA	4.2038
1232	8	99208244	99208244	G	T	intronic	NIPAL2	NA	NA	NA	intronic	ENSG00000104361	NA	NA	NA	NA	NA	8q22.2	NA	Name=MafK_(ab50322)	NA	NA	rs7010905	0.2	0.2	0.197	0.186701	0.2714	0.0823	0.2089	0.1672	0.2178	0.28	0.07	0.23	0.19	0.2491	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.900836	NA	NA	0.27589	0.211757	NA	0.196	NA	4.20361
1232	19	43441313	43441313	C	T	UTR5	PSG7	NM_001206650:c.-85G>A,NM_002783:c.-85G>A	NA	NA	UTR5	ENSG00000221878	ENST00000406070:c.-85G>A,ENST00000446844:c.-85G>A	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs10410311	0.22	0.22	0.169	0.272963	0.1302	0.4028	0.1844	0.2549	0.3732	0.13	0.39	0.14	0.23	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.017334	NA	NA	NA	NA	NA	0.225	NA	4.2031334
1232	2	172563922	172563922	G	A	intronic	DYNC1I2	NA	NA	NA	intronic	ENSG00000077380,ENSG00000268821	NA	NA	NA	Score=272;Name=lod=17	NA	2q31.1	NA	NA	NA	NA	rs312925	0.28	0.28	0.278	0.266973	0.2724	0.2034	0.2363	0.4024	0.1656	0.27	0.22	0.25	0.39	0.2484	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.092759	2.092759	NA	0.276347	0.344188	ID=COSN166335;OCCURENCE=1(NS)	0.37	NA	4.202853
1232	8	12236935	12236935	C	A	ncRNA_exonic	LOC649352	NA	NA	NA	ncRNA_exonic	ENSG00000255556	NA	NA	NA	NA	NA	8p23.1	NA	NA	NA	NA	rs13273613	0.48	0.48	0.496	0.509385	0.4642	0.3542	0.3991	0.7814	0.4264	0.44	0.34	0.39	0.77	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.223472	NA	NA	NA	NA	NA	0.072	NA	4.2024666
1232	X	200860	200860	T	C	exonic	PLCXD1	NA	synonymous SNV	PLCXD1:NM_018390:exon2:c.T6C:p.G2G	exonic	ENSG00000182378	NA	synonymous SNV	ENSG00000182378:ENST00000448477:exon1:c.T6C:p.G2G,ENSG00000182378:ENST00000381657:exon2:c.T6C:p.G2G,ENSG00000182378:ENST00000381663:exon2:c.T6C:p.G2G,ENSG00000182378:ENST00000415337:exon2:c.T6C:p.G2G,ENSG00000182378:ENST00000430923:exon2:c.T6C:p.G2G,ENSG00000182378:ENST00000443019:exon2:c.T6C:p.G2G,ENSG00000182378:ENST00000447472:exon2:c.T6C:p.G2G,ENSG00000182378:ENST00000399012:exon3:c.T6C:p.G2G,ENSG00000182378:ENST00000429181:exon3:c.T6C:p.G2G,ENSG00000182378:ENST00000445062:exon3:c.T6C:p.G2G	NA	NA	Xp22.33	NA	NA	NA	NA	rs9785927	0.79	0.79	0.75755	NA	NA	NA	NA	NA	NA	0.73	0.78	0.71	0.94	0.7255	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.446969	NA	NA	0.738827	0.916024	NA	0.717	NA	4.2023396
1232	12	48884536	48884536	T	C	intronic	C12orf54	NA	NA	NA	ncRNA_intronic	ENSG00000258121	NA	NA	NA	NA	NA	12q13.11	NA	NA	NA	NA	rs4237858	0.24	0.24	0.212	0.288938	0.0815	0.6548	0.3357	0.1543	0.274	0.08	0.55	0.26	0.11	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.536356	NA	NA	0.049654	0.132225	ID=COSN164237;OCCURENCE=1(NS)	NA	NA	4.2021793
1232	17	38153875	38153875	T	A	UTR3	PSMD3	NM_002809:c.*41T>A	NA	NA	UTR3	ENSG00000108344	ENST00000264639:c.*41T>A	NA	NA	Score=265;Name=lod=16	NA	17q21.1	NA	NA	NA	NA	rs7021	0.37	0.37	0.334	0.336262	0.3767	0.4494	0.3228	0.2708	0.2761	0.37	0.46	0.33	0.27	0.3711	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.082083	NA	NA	0.383903	0.299312	NA	0.326	NA	4.2016304
1232	17	79202956	79202956	T	C	exonic	ENTHD2	NA	synonymous SNV	ENTHD2:NM_144679:exon12:c.A1350G:p.P450P	exonic	ENSG00000167302	NA	synonymous SNV	ENSG00000167302:ENST00000300714:exon12:c.A1350G:p.P450P,ENSG00000167302:ENST00000374769:exon13:c.A1098G:p.P366P	NA	NA	17q25.3	NA	NA	NA	NA	rs2048057	0.46	0.46	0.38	0.460863	0.4682	0.6756	0.6282	0.0703	0.6411	0.47	0.69	0.61	0.09	0.518	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.145095	NA	NA	0.479535	0.137313	ID=COSM1387240;OCCURENCE=1(large_intestine)	0.355	NA	4.2009316
1232	8	23198732	23198732	C	A	ncRNA_intronic	LOC100507156	NA	NA	NA	ncRNA_exonic	ENSG00000253837	NA	NA	NA	NA	NA	8p21.3	NA	NA	NA	NA	rs11781891	0.14	0.14	0.135	0.138379	0.163	0.0615	0.2478	0.1672	0.0757	0.17	0.06	0.22	0.14	0.142	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.895788	NA	NA	0.160814	0.155924	NA	0.138	NA	4.2008526
1232	6	7481928	7481928	T	C	intergenic	RIOK1,DSP	dist=63658;dist=59942	NA	NA	ncRNA_exonic	ENSG00000233503	NA	NA	NA	Score=831;Name=lod=3174	NA	6p24.3	NA	NA	NA	NA	rs2763122	0.76	0.76	0.729	0.767372	0.7992	0.8244	0.8689	0.5356	0.9172	0.79	0.83	0.85	0.55	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.223909	NA	NA	NA	NA	NA	0.739	NA	4.2008
1232	7	53256158	53256158	T	C	intergenic	POM121L12,FLJ45974	dist=151540;dist=467044	NA	NA	ncRNA_exonic	ENSG00000227344	NA	NA	NA	Score=564;Name=lod=262	NA	7p12.1	NA	NA	NA	NA	rs10277601	0.9	0.9	0.901	0.911142	0.7992	0.9603	0.8718	0.9841	0.9049	0.8	0.97	0.87	0.98	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.358174	NA	NA	NA	NA	NA	0.949	NA	4.2008
1232	8	12237901	12237901	G	C	ncRNA_intronic	FAM66A	NA	NA	NA	ncRNA_intronic	ENSG00000227888	NA	NA	NA	NA	NA	8p23.1	NA	NA	NA	NA	rs2739966	0.45	0.45	0.462	0.460863	0.4662	0.3542	0.3963	0.6127	0.4059	0.44	0.34	0.41	0.64	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.892495	NA	NA	NA	NA	NA	0.377	NA	4.2004666
1232	4	119944611	119944611	G	T	exonic	SYNPO2	NA	synonymous SNV	SYNPO2:NM_001128933:exon2:c.G132T:p.G44G,SYNPO2:NM_001128934:exon2:c.G132T:p.G44G,SYNPO2:NM_133477:exon2:c.G132T:p.G44G	exonic	ENSG00000172403	NA	synonymous SNV	ENSG00000172403:ENST00000307142:exon2:c.G132T:p.G44G,ENSG00000172403:ENST00000429713:exon2:c.G132T:p.G44G,ENSG00000172403:ENST00000434046:exon2:c.G132T:p.G44G,ENSG00000172403:ENST00000448416:exon2:c.G132T:p.G44G	NA	NA	4q26	NA	NA	NA	NA	rs1459058	0.41	0.41	0.375	0.411941	0.503	0.4524	0.4784	0.1906	0.5286	0.5	0.44	0.5	0.16	0.4661	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.900133	NA	NA	0.497209	0.231049	NA	0.457	NA	4.2003576
1232	20	47865372	47865372	G	A	exonic	ZNFX1	NA	synonymous SNV	ZNFX1:NM_021035:exon14:c.C4189T:p.L1397L	exonic	ENSG00000124201	NA	synonymous SNV	ENSG00000124201:ENST00000371752:exon14:c.C4189T:p.L1397L,ENSG00000124201:ENST00000396105:exon14:c.C4189T:p.L1397L	NA	NA	20q13.13	NA	NA	Name=2	NA	rs238208	0.78	0.78	0.797	0.778355	0.84	0.621	0.7017	0.9425	0.7096	0.84	0.6	0.74	0.93	0.7909	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.38567	NA	NA	0.835698	0.918747	NA	0.775	NA	4.2000686
1232	12	52627215	52627215	A	G	exonic	KRT7	NA	synonymous SNV	KRT7:NM_005556:exon1:c.A135G:p.S45S	exonic	ENSG00000135480	NA	synonymous SNV	ENSG00000135480:ENST00000331817:exon1:c.A135G:p.S45S	NA	NA	12q13.13	NA	Name=Pol2	NA	NA	rs7308888	0.88	0.88	0.873	0.888778	0.8191	0.9048	0.8473	0.9781	0.8528	0.83	0.91	0.79	0.98	0.826	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.15516	2.15516	NA	0.821642	0.94811	NA	0.232	NA	4.1999246
1232	19	36033825	36033825	G	A	ncRNA_exonic	LOC100506469	NA	NA	NA	ncRNA_exonic	ENSG00000236144	NA	NA	NA	NA	NA	19q13.12	NA	NA	NA	NA	rs2293681	0.08	0.08	0.072	0.0840655	0.162	0.0198	0.0965	0.0363	0.1258	0.15	0.02	0.11	0.04	0.1335	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.123065	NA	NA	0.171279	0.058783	NA	0.051	NA	4.1998876
1232	9	15468480	15468480	T	C	intronic	PSIP1	NA	NA	NA	intronic	ENSG00000164985	NA	NA	NA	NA	NA	9p22.3	NA	Name=Pol2	NA	NA	rs4741507	0.72	0.72	0.674	0.634984	0.8002	0.7649	0.8602	0.3419	0.5675	0.81	0.79	0.88	0.38	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.642838	NA	NA	NA	NA	NA	0.667	NA	4.1998
1232	13	114538460	114538460	C	T	ncRNA_intronic	GAS6-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000233695	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs7331124	0.11	0.11	0.095	0.0848642	0.1829	0.006	0.1081	0.0908	0.0409	0.18	0.01	0.13	0.09	0.1234	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.357293	NA	NA	0.160573	0.097127	NA	0.152	NA	4.1997936
1232	19	58326001	58326001	A	G	intronic	ZNF552	NA	NA	NA	exonic	ENSG00000178935	NA	synonymous SNV	ENSG00000178935:ENST00000596248:exon1:c.T111C:p.C37C	NA	NA	19q13.43	NA	Name=Pol2(b),HA-E2F1,ZNF263	NA	NA	rs2303817	0.61	0.61	0.604	0.575679	0.5328	0.6498	0.6239	0.6702	0.3814	0.54	0.67	0.61	0.66	0.5785	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.092478	NA	NA	0.522313	0.628613	NA	0.478	NA	4.1997203
1232	12	13248445	13248445	C	A	intronic	GSG1	NA	NA	NA	intronic	ENSG00000084444,ENSG00000111305	NA	NA	NA	NA	NA	12p13.1	NA	Name=MafK_(ab50322),ZNF263,MafF_(M8194),MafK_(SC-477)	NA	NA	rs2291396	0.27	0.27	0.263	0.239417	0.3897	0.2361	0.2738	0.0295	0.3476	0.4	0.27	0.29	0.05	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.37162	NA	NA	0.410748	0.084538	NA	0.246	NA	4.199552
1232	12	124099704	124099704	G	C	intronic	DDX55	NA	NA	NA	intronic	ENSG00000111364	NA	NA	NA	NA	NA	12q24.31	NA	Name=CTCF	NA	NA	rs35708602	0.24	0.24	0.257	0.252796	0.2664	0.0159	0.2205	0.447	0.2434	0.27	0.02	0.21	0.47	0.2581	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.578132	NA	NA	0.276279	0.414889	NA	0.232	NA	4.199221
1232	11	18267112	18267112	A	G	intronic	SAA2,SAA2-SAA4	NA	NA	NA	ncRNA_intronic	ENSG00000255071	NA	NA	NA	NA	NA	11p15.1	NA	NA	Name=6	NA	rs2445173	0.46	0.46	0.452	0.444888	0.3797	0.7887	0.3501	0.329	0.3814	0.39	0.79	0.35	0.29	0.3915	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.36413	NA	NA	0.363266	0.374943	NA	0.217	NA	4.1988673
1232	3	111860222	111860222	A	G	intronic	SLC9C1	NA	NA	NA	intronic	ENSG00000172139	NA	NA	NA	NA	NA	3q13.2	NA	NA	Name=3	NA	rs1492480	0.42	0.42	0.404	0.413938	0.4135	0.4226	0.4424	0.3548	0.4652	0.42	0.48	0.45	0.36	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.019342	NA	NA	0.38805	0.320087	NA	0.399	NA	4.19845
1232	1	207818719	207818719	G	A	intronic	CR1L	NA	NA	NA	ncRNA_intronic	ENSG00000244703	NA	NA	NA	NA	NA	1q32.2	NA	Name=E2F6_(H-50)	NA	NA	rs11118237	0.31	0.31	0.273	0.292532	0.3767	0.3313	0.2896	0.1785	0.3221	0.38	0.29	0.33	0.2	0.358	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.431372	NA	NA	0.400326	0.218112	NA	0.21	NA	4.1983073
1232	12	121438844	121438844	T	C	intronic	HNF1A	NA	NA	NA	ncRNA_exonic	ENSG00000271769	NA	NA	NA	NA	Name=N-glycan levels	12q24.31	NA	NA	NA	NA	rs735396	0.37	0.37	0.35	0.360224	0.3777	0.4802	0.3963	0.1263	0.5092	0.37	0.52	0.42	0.14	0.3884	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.289082	1.289082	NA	0.368953	0.141852	NA	0.319	NA	4.1982803
1232	6	133844137	133844137	C	A	intronic	EYA4	NA	NA	NA	ncRNA_intronic	ENSG00000227954	NA	NA	NA	NA	NA	6q23.2	NA	NA	NA	NA	rs41286206	0.15	0.15	0.125	0.154752	0.1352	0.131	0.1153	0.211	0.1513	0.14	0.13	0.12	0.2	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.054667	NA	NA	NA	NA	NA	0.196	NA	4.1981333
1232	12	29617736	29617736	C	T	ncRNA_exonic	LOC101055625	NA	NA	NA	intronic	ENSG00000187950,ENSG00000257599	NA	NA	NA	NA	NA	12p11.22	NA	NA	NA	NA	rs3741751	0.16	0.16	0.156	0.182109	0.1352	0.0853	0.1023	0.3585	0.1483	0.14	0.1	0.08	0.33	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.168791	NA	NA	NA	NA	NA	0.254	NA	4.1981333
1232	2	113875631	113875631	T	C	intronic	IL1RN	NA	NA	NA	intronic	ENSG00000136689	NA	NA	NA	NA	NA	2q13	NA	Name=Pol2	NA	NA	rs16065	0.18	0.18	0.145	0.185703	0.2903	0.1091	0.3213	0.0174	0.2883	0.29	0.09	0.31	0.02	0.2448	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.648969	NA	NA	0.26686	0.051748	NA	0.239	NA	4.19804
1232	8	25890549	25890549	T	C	intronic	EBF2	NA	NA	NA	intronic	ENSG00000221818	NA	NA	NA	NA	NA	8p21.2	Score=754;Name=V$STAT5A_02	NA	NA	NA	rs7826952	0.35	0.35	0.336	0.330671	0.2694	0.3214	0.3617	0.4743	0.1871	0.26	0.31	0.33	0.51	0.289	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.739704	NA	NA	0.243719	0.441327	NA	0.333	NA	4.197881
1232	17	72349067	72349067	C	T	exonic	KIF19	NA	synonymous SNV	KIF19:NM_153209:exon15:c.C2088T:p.S696S	exonic	ENSG00000196169	NA	synonymous SNV	ENSG00000196169:ENST00000389916:exon15:c.C2088T:p.S696S	NA	NA	17q25.1	NA	NA	NA	NA	rs2280108	0.37	0.37	0.34	0.330471	0.5109	0.3988	0.4409	0.0287	0.4039	0.51	0.42	0.44	0.03	0.4491	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.312406	NA	NA	0.509095	0.105002	NA	0.391	NA	4.1975716
1232	19	10267077	10267077	T	C	exonic	DNMT1	NA	synonymous SNV	DNMT1:NM_001379:exon17:c.A1341G:p.P447P,DNMT1:NM_001130823:exon18:c.A1389G:p.P463P	exonic	ENSG00000130816	NA	synonymous SNV	ENSG00000130816:ENST00000340748:exon17:c.A1341G:p.P447P,ENSG00000130816:ENST00000540357:exon17:c.A1341G:p.P447P,ENSG00000130816:ENST00000359526:exon18:c.A1389G:p.P463P	NA	NA	19p13.2	NA	NA	NA	NA	rs2228611	0.54	0.54	0.523	0.533946	0.4612	0.6488	0.4539	0.5204	0.5654	0.46	0.65	0.47	0.57	0.5188	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.055669	NA	NA	0.489302	0.49478	NA	0.623	NA	4.1973646
1232	19	45213755	45213755	A	G	intronic	CEACAM16	NA	NA	NA	ncRNA_intronic	ENSG00000266903	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs143934888	0.02	0.02	0.016	0.0225639	0.0467	NA	0.0245	0.0015	0.0481	0.04	NA	0.02	0.002	0.0424	0.047	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.876184	NA	NA	0.047052	0.008772	NA	0.022	NA	4.1971813
1232	11	4566711	4566711	C	T	exonic	OR52M1	NA	synonymous SNV	OR52M1:NM_001004137:exon1:c.C291T:p.D97D	exonic	ENSG00000197790	NA	synonymous SNV	ENSG00000197790:ENST00000360213:exon1:c.C291T:p.D97D	NA	NA	11p15.4	NA	NA	NA	NA	rs2709182	0.43	0.43	0.457	0.4373	0.492	0.2639	0.3444	0.5174	0.5174	0.48	0.29	0.4	0.53	0.4594	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.302649	NA	NA	0.518148	0.504998	NA	0.399	NA	4.1971186
1232	8	6735399	6735399	C	T	UTR5	DEFB1	NM_005218:c.-20G>A	NA	NA	ncRNA_UTR5	ENSG00000164825	NA	NA	NA	NA	NA	8p23.1	NA	Name=STAT3,p300_(N-15),TBP,AP-2gamma,GTF2F1_(RAP-74),CEBPB	NA	NA	rs11362	0.4	0.4	0.376	0.396565	0.4384	0.4315	0.438	0.2995	0.4192	0.45	0.4	0.43	0.32	0.4254	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.329062	NA	NA	0.439302	0.315252	ID=COSN168267;OCCURENCE=1(large_intestine),2(endometrium)	0.464	NA	4.196898
1232	19	21838830	21838830	A	C	intergenic	ZNF429,ZNF100	dist=117751;dist=68013	NA	NA	ncRNA_exonic	ENSG00000268278	NA	NA	NA	NA	NA	19p12	NA	Name=ZNF274,KAP1	NA	NA	rs10422804	0.79	0.79	0.735	0.773562	0.8032	0.8958	0.7839	0.5817	0.8691	0.81	0.88	0.81	0.63	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.403973	NA	1	NA	NA	NA	0.848	NA	4.1968
1232	15	42691664	42691664	C	G	intronic	CAPN3	NA	NA	NA	ncRNA_intronic	ENSG00000258461	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs3743003	0.12	0.12	0.13	0.150559	0.0308	0.0655	0.0548	0.4077	0.0818	0.03	0.06	0.06	0.37	0.0661	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.648302	NA	NA	0.03966	0.328416	NA	0.145	NA	4.1967733
1232	22	24964128	24964128	T	C	exonic	SNRPD3	NA	synonymous SNV	SNRPD3:NM_004175:exon3:c.T303C:p.A101A	exonic	ENSG00000100028	NA	synonymous SNV	ENSG00000100028:ENST00000215829:exon3:c.T303C:p.A101A,ENSG00000100028:ENST00000402849:exon3:c.T303C:p.A101A,ENSG00000100028:ENST00000404603:exon3:c.T303C:p.A101A	Score=536;Name=lod=202	NA	22q11.23	NA	NA	NA	NA	rs4597	0.75	0.75	0.722	0.681709	0.8539	0.8522	0.7925	0.4191	0.6053	0.86	0.83	0.79	0.46	0.7827	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.397045	1.397045	NA	0.833721	0.502724	NA	0.703	NA	4.1963456
1232	6	30166935	30166935	G	A	UTR5	TRIM26	NM_003449:c.-55C>T	NA	NA	UTR5	ENSG00000234127	ENST00000454678:c.-55C>T	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs2072107	0.12	0.12	0.111	0.126997	0.1372	0.1508	0.0922	0.0386	0.2362	0.15	0.17	0.1	0.04	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.320721	NA	NA	NA	NA	NA	0.087	NA	4.1961334
1232	9	96714981	96714981	G	A	intronic	BARX1	NA	NA	NA	intronic	ENSG00000131668	NA	NA	NA	NA	NA	9q22.32	NA	Name=SUZ12	NA	NA	rs12684081	0.19	0.19	0.153	0.176518	0.2813	0.0933	0.3127	0.0809	0.1871	0.29	0.07	0.27	0.1	0.2447	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.851956	1.851956	NA	0.278023	0.123241	NA	0.145	NA	4.195977
1232	4	70146704	70146704	G	A	exonic	UGT2B28	NA	synonymous SNV	UGT2B28:NM_001207004:exon1:c.G486A:p.A162A,UGT2B28:NM_053039:exon1:c.G486A:p.A162A	exonic	ENSG00000135226	NA	synonymous SNV	ENSG00000135226:ENST00000335568:exon1:c.G486A:p.A162A,ENSG00000135226:ENST00000511240:exon1:c.G486A:p.A162A	NA	NA	4q13.2	NA	NA	NA	NA	rs7689398	0.4	0.4	0.377	0.367812	0.4771	0.3829	0.4496	0.2345	0.362	0.52	0.39	0.45	0.21	0.4828	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.303447	NA	NA	0.510985	0.3161	NA	0.333	NA	4.1957816
1232	3	112709828	112709828	C	G	UTR5	GTPBP8	NM_014170:c.-19C>G,NM_138485:c.-19C>G	NA	NA	UTR5	ENSG00000163607	ENST00000383678:c.-19C>G	NA	NA	NA	NA	3q13.2	NA	Name=TAF7_(SQ-8),YY1_(C-20),E2F6,Pol2-4H8,ZNF263,Pol2,Ini1,TCF4,YY1,E2F4,GABP,E2F6_(H-50),TAF1,Znf143_(16618-1-AP),TBP,GTF2F1_(RAP-74),CTCF,Nrf1,PAX5-C20,c-Myc,HEY1,ELF1_(SC-631)	Name=148	NA	rs2272393	0.5	0.5	0.416	0.472644	0.7227	0.3353	0.7161	0.1717	0.591	0.73	0.34	0.7	0.17	0.6744	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.074633	NA	NA	0.740493	0.285047	NA	0.478	NA	4.1957404
1233	5	173907351	173907351	A	G	intergenic	HMP19,MSX2	dist=371169;dist=244224	NA	NA	ncRNA_intronic	ENSG00000249306	NA	NA	NA	Score=417;Name=lod=66	NA	5q35.2	NA	NA	NA	NA	rs1827287	0.9	0.9	0.881	0.914736	0.8052	1	0.902	0.9418	0.9121	0.81	1	0.88	0.93	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.041948	NA	NA	NA	NA	NA	0.877	NA	4.1948
1233	12	66039979	66039979	G	C	intergenic	MSRB3,RPSAP52	dist=179292;dist=111821	NA	NA	ncRNA_exonic	ENSG00000213344	NA	NA	NA	Score=620;Name=lod=441	NA	12q14.3	NA	NA	NA	NA	rs2468383	0.53	0.53	0.516	0.503195	0.8052	0.4444	0.5807	0.1785	0.637	0.8	0.45	0.58	0.2	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.964362	1.964362	NA	NA	NA	NA	0.493	NA	4.1948
1233	19	8032680	8032680	C	T	intronic	ELAVL1	NA	NA	NA	intronic	ENSG00000066044	NA	NA	NA	Score=703;Name=lod=958	NA	19p13.2	NA	NA	NA	NA	rs1077340	0.23	0.23	0.235	0.202476	0.2982	0.0734	0.1628	0.3321	0.09	0.31	0.08	0.17	0.34	0.2333	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.632402	1.632402	NA	0.273837	0.330154	NA	0.261	NA	4.194663
1233	16	31404571	31404571	T	C	upstream	ITGAD	NA	NA	NA	upstream	ENSG00000156886	NA	NA	NA	NA	NA	16p11.2	NA	NA	Name=3	NA	rs8050500	0.51	0.51	0.486	0.492612	0.4722	0.628	0.4568	0.4682	0.4325	0.47	0.64	0.46	0.45	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.624621	1.624621	NA	NA	NA	NA	0.391	NA	4.1944666
1233	11	534332	534332	G	A	UTR5	HRAS	NM_176795:c.-10C>T,NM_005343:c.-10C>T,NM_001130442:c.-10C>T	NA	NA	UTR5	ENSG00000174775	ENST00000493230:c.-10C>T,ENST00000397596:c.-10C>T,ENST00000397594:c.-10C>T,ENST00000417302:c.-10C>T,ENST00000451590:c.-10C>T,ENST00000311189:c.-10C>T	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs41294870	0.02	0.02	0.013	0.0357428	0.0457	NA	0.0317	0.0113	0.0982	0.04	NA	0.05	0.01	0.0475	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.115301	NA	NA	0.046174	0.012739	NA	0.08	NA	4.1939594
1233	9	101258803	101258803	G	A	intronic	GABBR2	NA	NA	NA	intronic	ENSG00000136928	NA	NA	NA	Score=497;Name=lod=140	NA	9q22.33	NA	NA	NA	NA	rs16916507	0.21	0.21	0.242	0.233427	0.2734	0.0357	0.1441	0.3744	0.2689	0.28	0.04	0.18	0.31	0.2514	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.704284	1.704284	NA	0.281512	0.348616	NA	0.333	NA	4.193688
1233	22	50439626	50439626	G	A	UTR5	IL17REL	NM_001001694:c.-7C>T	NA	NA	UTR5	ENSG00000188263	ENST00000341280:c.-7C>T,ENST00000389983:c.-7C>T	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs9617098	0.01	0.01	0.01	0.0091853	0.0298	NA	0.0159	0.003	0.001	0.03	NA	0.02	0.002	0.0557	0.055	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.173903	NA	NA	0.054753	0.01254	NA	0.101	NA	4.1930804
1233	17	14673431	14673431	C	A	intergenic	HS3ST3B1,CDRT7	dist=423939;dist=260861	NA	NA	ncRNA_exonic	ENSG00000205325	NA	NA	NA	NA	NA	17p12	NA	Name=STAT3,STAT1	NA	NA	rs72815721	0.32	0.32	0.3	0.291733	0.4026	0.37	0.3559	0.0628	0.3609	0.41	0.37	0.39	0.07	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.10331	NA	NA	0.404463	0.12789	NA	0.304	NA	4.192937
1233	8	116599199	116599199	T	G	intronic	TRPS1	NA	NA	NA	intronic	ENSG00000104447	NA	NA	NA	NA	Name=HDL cholesterol	8q23.3	NA	Name=CTCF	NA	NA	rs2293889	0.75	0.75	0.753	0.771366	0.5835	0.8264	0.745	0.9554	0.6779	0.59	0.83	0.68	0.95	0.6503	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.141148	NA	NA	0.573368	0.884865	NA	0.804	NA	4.192832
1233	5	51227527	51227527	T	C	intergenic	ISL1,PELO	dist=536964;dist=856247	NA	NA	ncRNA_exonic	ENSG00000249270	NA	NA	NA	Score=366;Name=lod=41	NA	5q11.2	NA	NA	NA	NA	rs10940148	0.6	0.6	0.558	0.577476	0.8072	0.4851	0.7334	0.2678	0.7444	0.8	0.5	0.73	0.32	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.043804	NA	NA	NA	NA	ID=COSN167466;OCCURENCE=1(large_intestine)	0.572	NA	4.1928
1233	7	36345194	36345194	G	A	intergenic	EEPD1,KIAA0895	dist=4042;dist=18565	NA	NA	upstream	ENSG00000234457	NA	NA	NA	NA	NA	7p14.2	NA	Name=E2F6_(H-50)	NA	NA	rs4723511	0.29	0.29	0.244	0.302316	0.3072	0.3274	0.2954	0.1263	0.5143	0.33	0.35	0.28	0.15	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.760959	NA	NA	NA	NA	NA	0.174	NA	4.1928
1233	1	16890672	16890672	G	A	exonic	NBPF1	NA	unknown	UNKNOWN	exonic	ENSG00000219481	NA	synonymous SNV	ENSG00000219481:ENST00000430580:exon29:c.C3186T:p.G1062G	NA	NA	1p36.13	NA	NA	NA	NA	rs2419525	NA	NA	0.479	0.546126	0.5885	0.5169	0.5591	0.5091	0.5736	NA	NA	NA	NA	0.5522	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.210085	NA	NA	NA	NA	NA	NA	NA	4.1926333
1233	14	77751925	77751925	C	T	exonic	POMT2	NA	synonymous SNV	POMT2:NM_013382:exon13:c.G1383A:p.R461R	exonic	ENSG00000009830	NA	synonymous SNV	ENSG00000009830:ENST00000261534:exon13:c.G1383A:p.R461R	Score=621;Name=lod=444	NA	14q24.3	NA	NA	NA	NA	rs2270419	0.87	0.87	0.892	0.858227	0.8469	0.9534	0.7594	0.882	0.8098	0.84	0.96	0.75	0.88	0.8208	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.318746	1.318746	NA	0.806512	0.86995	NA	0.913	NA	4.1924546
1233	19	10449392	10449392	A	G	exonic	ICAM3	NA	synonymous SNV	ICAM3:NM_002162:exon2:c.T309C:p.S103S	exonic	ENSG00000076662	NA	synonymous SNV	ENSG00000076662:ENST00000160262:exon2:c.T309C:p.S103S,ENSG00000076662:ENST00000589261:exon2:c.T78C:p.S26S,ENSG00000076662:ENST00000589249:exon3:c.T78C:p.S26S,ENSG00000076662:ENST00000590569:exon3:c.T276C:p.S92S	NA	NA	19p13.2	NA	NA	Name=3	NA	rs2304240	0.84	0.84	0.846	0.828275	0.8231	0.8254	0.6671	0.9372	0.8037	0.83	0.82	0.73	0.96	0.8173	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.541891	NA	NA	0.83407	0.912846	NA	0.848	NA	4.1921966
1233	3	10140696	10140696	A	G	UTR3	FANCD2	NM_033084:c.*62A>G	NA	NA	UTR3	ENSG00000144554	ENST00000287647:c.*62A>G	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs7647987	0.23	0.23	0.233	0.241214	0.1412	0.0675	0.196	0.5159	0.184	0.15	0.1	0.2	0.52	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.431856	NA	NA	NA	NA	NA	0.37	NA	4.1921334
1233	22	18075263	18075263	T	C	UTR3	ATP6V1E1	NM_001039367:c.*177A>G,NM_001039366:c.*177A>G,NM_001696:c.*177A>G	NA	NA	UTR3	ENSG00000131100	ENST00000253413:c.*177A>G,ENST00000399796:c.*177A>G,ENST00000399798:c.*177A>G	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs3532	0.09	0.09	0.069	0.0704872	0.1412	0.0605	0.1254	0.0061	0.0562	0.15	0.07	0.14	0.01	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.526907	NA	NA	NA	NA	NA	0.116	NA	4.1921334
1233	3	129822950	129822950	A	G	ncRNA_intronic	FAM86HP	NA	NA	NA	ncRNA_exonic	ENSG00000253540	NA	NA	NA	NA	NA	3q22.1	NA	NA	NA	NA	rs12495527	0.42	0.42	0.382	0.427716	0.4751	0.4117	0.4107	0.3585	0.501	0.46	0.39	0.43	0.36	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.188111	NA	NA	NA	NA	NA	0.319	NA	4.1915666
1233	14	104378852	104378852	G	A	UTR3	C14orf2	NM_001127393:c.*151C>T,NM_004894:c.*151C>T	NA	NA	UTR3	ENSG00000156411	ENST00000286953:c.*151C>T,ENST00000554880:c.*151C>T,ENST00000555030:c.*183C>T,ENST00000414262:c.*151C>T,ENST00000553430:c.*1360C>T	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs8095	0.06	0.06	0.055	0.0479233	0.1421	0.002	0.0605	0.0091	0.0419	0.15	0.0035	0.05	0.01	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.252115	NA	NA	NA	NA	NA	0.087	NA	4.1912334
1233	22	43172489	43172489	G	A	intergenic	A4GALT,ARFGAP3	dist=55613;dist=20043	NA	NA	ncRNA_exonic	ENSG00000234009	NA	NA	NA	Score=822;Name=lod=2930	NA	22q13.2	NA	NA	NA	NA	rs2413717	0.86	0.86	0.854	0.877396	0.8091	0.9901	0.8444	0.8585	0.8804	0.82	0.99	0.82	0.82	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.653978	1.653978	NA	NA	NA	NA	0.87	NA	4.1909
1233	2	202025621	202025621	A	G	exonic	CFLAR	NA	synonymous SNV	CFLAR:NM_001202515:exon5:c.A525G:p.P175P,CFLAR:NM_001202516:exon7:c.A1155G:p.P385P,CFLAR:NM_001202518:exon7:c.A972G:p.P324P,CFLAR:NM_001202517:exon8:c.A972G:p.P324P,CFLAR:NM_001202519:exon8:c.A972G:p.P324P,CFLAR:NM_001127183:exon9:c.A1260G:p.P420P,CFLAR:NM_003879:exon9:c.A1260G:p.P420P	exonic	ENSG00000003402	NA	synonymous SNV	ENSG00000003402:ENST00000341582:exon7:c.A1155G:p.P385P,ENSG00000003402:ENST00000479953:exon7:c.A972G:p.P324P,ENSG00000003402:ENST00000443227:exon8:c.A972G:p.P324P,ENSG00000003402:ENST00000457277:exon8:c.A1260G:p.P420P,ENSG00000003402:ENST00000309955:exon9:c.A1260G:p.P420P,ENSG00000003402:ENST00000340870:exon9:c.A1260G:p.P420P,ENSG00000003402:ENST00000423241:exon9:c.A1260G:p.P420P	NA	NA	2q33.1	NA	NA	NA	NA	rs1594	0.41	0.41	0.387	0.398762	0.5109	0.2569	0.4035	0.4614	0.3415	0.49	0.23	0.43	0.47	0.4508	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.119389	NA	NA	0.514535	0.470268	NA	0.413	NA	4.1904316
1233	3	3189279	3189279	A	G	exonic	TRNT1	NA	synonymous SNV	TRNT1:NM_182916:exon7:c.A948G:p.A316A	exonic	ENSG00000072756	NA	synonymous SNV	ENSG00000072756:ENST00000251607:exon7:c.A948G:p.A316A,ENSG00000072756:ENST00000280591:exon7:c.A888G:p.A296A,ENSG00000072756:ENST00000434583:exon7:c.A948G:p.A316A	Score=612;Name=lod=408	NA	3p26.2	NA	NA	NA	NA	rs1705805	0.76	0.76	0.749	0.739018	0.837	0.9494	0.755	0.4319	0.8252	0.83	0.95	0.76	0.44	0.7986	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.441463	1.441463	NA	0.841126	0.524285	NA	0.732	NA	4.1899406
1233	11	122484431	122484431	T	G	intergenic	MIR100HG,UBASH3B	dist=410661;dist=41967	NA	NA	ncRNA_exonic	ENSG00000254572	NA	NA	NA	Score=820;Name=lod=2866	NA	11q24.1	NA	NA	NA	NA	rs7930461	0.82	0.82	0.811	0.816893	0.8101	0.8313	0.83	0.7973	0.8262	0.81	0.85	0.82	0.8	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.089081	NA	NA	NA	NA	NA	0.833	NA	4.1899
1233	13	45594584	45594584	T	C	intronic	KIAA1704	NA	NA	NA	ncRNA_intronic	ENSG00000223732	NA	NA	NA	NA	NA	13q14.12	NA	NA	NA	NA	rs7331627	0.09	0.09	0.104	0.101038	0.0547	0.1448	0.0432	0.1884	0.0266	0.05	0.12	0.04	0.16	0.0556	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.123491	NA	NA	0.033264	0.166818	NA	0.072	NA	4.1897693
1233	8	28981063	28981063	T	G	intronic	KIF13B	NA	NA	NA	ncRNA_intronic	ENSG00000254129	NA	NA	NA	NA	NA	8p12	NA	NA	NA	NA	rs3750263	0.2	0.2	0.166	0.214856	0.1441	0.2599	0.3545	0.1467	0.2342	0.14	0.26	0.31	0.12	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.122059	NA	NA	NA	NA	ID=COSN168297;OCCURENCE=1(large_intestine)	0.196	NA	4.1892333
1233	2	188859657	188859657	G	A	intergenic	TFPI,GULP1	dist=440438;dist=296739	NA	NA	ncRNA_intronic	ENSG00000231689	NA	NA	NA	NA	NA	2q32.1	NA	NA	Name=64	NA	rs7579998	0.81	0.81	0.797	0.79353	0.8111	0.8194	0.8329	0.7761	0.7444	0.82	0.82	0.81	0.76	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.309507	NA	NA	NA	NA	NA	0.768	NA	4.1889
1233	8	135577533	135577533	T	G	intronic	ZFAT	NA	NA	NA	intronic	ENSG00000066827	NA	NA	NA	NA	NA	8q24.22	NA	NA	Name=8	NA	rs6988653	NA	NA	0.299	0.324481	0.2475	0.5377	0.3242	0.1936	0.3609	NA	NA	NA	NA	0.2946	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.211239	NA	NA	0.269341	0.229516	NA	0.188	NA	4.188559
1233	7	142104571	142104571	G	A	intergenic	LOC730441,MTRNR2L6	dist=132503;dist=269560	NA	NA	upstream	ENSG00000211732	NA	NA	NA	NA	Name=Capecitabine sensitivity	7q34	NA	NA	NA	NA	rs361433	0.08	0.08	0.078	0.108427	0.1024	0.004	0.1095	0.1384	0.181	0.09	0.01	0.12	0.14	0.1073	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.807715	NA	NA	0.101818	0.134555	NA	0.174	NA	4.188482
1233	12	48879908	48879908	T	C	intronic	C12orf54	NA	NA	NA	ncRNA_intronic	ENSG00000258121	NA	NA	NA	NA	NA	12q13.11	NA	NA	NA	NA	rs4620769	0.28	0.28	0.211	0.288538	0.0815	0.6548	0.3357	0.1528	0.274	0.09	0.63	0.3	0.14	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.7793	NA	NA	0.063482	0.145954	ID=COSN164236;OCCURENCE=1(NS)	0.167	NA	4.1883513
1233	12	51489009	51489009	C	T	UTR3	TFCP2	NM_001173453:c.*15G>A,NM_001173452:c.*15G>A,NM_005653:c.*15G>A	NA	NA	UTR3	ENSG00000135457	ENST00000257915:c.*15G>A,ENST00000307660:c.*15G>A,ENST00000549867:c.*15G>A,ENST00000548115:c.*15G>A	NA	NA	NA	NA	12q13.12	NA	NA	NA	NA	rs13463	0.02	0.02	0.019	0.0173722	0.0527	NA	0.036	0.0045	0.0031	0.04	NA	0.03	0.01	0.0373	0.055	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.660634	NA	NA	0.055116	0.012029	NA	0.014	NA	4.1882174
1233	9	74975492	74975492	T	C	intronic	ZFAND5	NA	NA	NA	intronic	ENSG00000107372	NA	NA	NA	NA	NA	9q21.13	NA	NA	Name=25	NA	rs2146184	0.4	0.4	0.372	0.378994	0.3976	0.4127	0.4582	0.2935	0.3845	0.38	0.45	0.49	0.3	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.688392	1.688392	NA	0.414365	0.294521	NA	0.362	NA	4.188035
1233	2	21263639	21263639	T	G	intronic	APOB	NA	NA	NA	intronic	ENSG00000084674	NA	NA	NA	NA	NA	2p24.1	NA	Name=HEY1	NA	NA	rs531819	0.86	0.86	0.854	0.854433	0.8121	0.996	0.8746	0.764	0.8599	0.81	0.99	0.88	0.79	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.178263	NA	NA	NA	NA	NA	0.891	NA	4.1879
1233	6	46521602	46521602	C	A	intronic	CYP39A1	NA	NA	NA	intronic	ENSG00000146233	NA	NA	NA	Score=433;Name=lod=77	NA	6p12.3	NA	NA	NA	NA	rs699939	0.38	0.38	0.371	0.424321	0.2416	0.2639	0.3905	0.7761	0.3262	0.25	0.26	0.37	0.74	0.332	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.299974	NA	NA	0.238589	0.683409	NA	0.391	NA	4.187811
1233	10	133954011	133954011	C	T	exonic	JAKMIP3	NA	synonymous SNV	JAKMIP3:NM_001105521:exon9:c.C1401T:p.D467D	exonic	ENSG00000188385	NA	synonymous SNV	ENSG00000188385:ENST00000298622:exon9:c.C1401T:p.D467D	NA	NA	10q26.3	NA	NA	NA	NA	rs2818387	0.51	0.51	0.499	0.513978	0.4841	0.5883	0.5793	0.4584	0.4969	0.48	0.55	0.58	0.45	0.5044	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.994275	NA	NA	0.490739	0.452345	NA	0.464	NA	4.1874276
1233	3	9799113	9799113	A	G	UTR3	CAMK1	NM_003656:c.*110T>C	NA	NA	UTR3	ENSG00000114026,ENSG00000134072	ENST00000344629:c.*279A>G;ENST00000256460:c.*110T>C,ENST00000421120:c.*88T>C,ENST00000397277:c.*1104T>C	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs293795	0.16	0.16	0.158	0.169728	0.1461	0.0397	0.1383	0.3328	0.1299	0.15	0.05	0.15	0.32	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.122344	NA	NA	NA	NA	NA	0.174	NA	4.1872334
1233	18	56409002	56409002	A	C	intronic	MALT1	NA	NA	NA	ncRNA_intronic	ENSG00000267476	NA	NA	NA	NA	NA	18q21.32	NA	NA	NA	NA	rs4940747	0.16	0.16	0.133	0.14996	0.1461	0.1379	0.2493	0.1331	0.1186	0.14	0.14	0.24	0.15	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.680936	NA	NA	NA	NA	NA	0.152	NA	4.1872333
1233	13	46104130	46104130	G	C	intronic	COG3	NA	NA	NA	intronic	ENSG00000136152	NA	NA	NA	NA	NA	13q14.13	NA	NA	Name=4	NA	rs2274286	0.85	0.85	0.842	0.849241	0.8131	0.881	0.8862	0.8275	0.8569	0.82	0.9	0.87	0.81	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.435613	NA	NA	NA	NA	NA	0.819	NA	4.1869
1233	19	48807401	48807401	C	T	intronic	CCDC114	NA	NA	NA	intronic	ENSG00000105479	NA	NA	NA	NA	NA	19q13.33	NA	Name=RXRA	NA	NA	rs56177753	0.2	0.2	0.178	0.168131	0.2803	0.1339	0.2305	0.1036	0.1309	0.26	0.14	0.28	0.1	0.2441	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.88938	NA	NA	0.289092	0.138205	NA	0.203	NA	4.186508
1233	14	36235211	36235211	C	T	intronic	RALGAPA1	NA	NA	NA	ncRNA_exonic	ENSG00000257957	NA	NA	NA	NA	NA	14q13.2	NA	NA	NA	NA	rs10152105	0.11	0.11	0.092	0.110423	0.1471	0.0992	0.0865	0.0779	0.1452	0.14	0.08	0.11	0.08	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.203955	2.203955	NA	NA	NA	NA	0.094	NA	4.1862333
1233	18	9887394	9887394	C	T	exonic	TXNDC2	NA	synonymous SNV	TXNDC2:NM_001098529:exon2:c.C918T:p.A306A,TXNDC2:NM_032243:exon2:c.C717T:p.A239A	exonic	ENSG00000168454	NA	synonymous SNV	ENSG00000168454:ENST00000306084:exon2:c.C918T:p.A306A,ENSG00000168454:ENST00000357775:exon2:c.C717T:p.A239A	NA	NA	18p11.22	NA	NA	NA	NA	rs2240910	0.51	0.51	0.485	0.518371	0.4761	0.8155	0.5331	0.3623	0.456	0.47	0.75	0.48	0.33	0.5149	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.181348	NA	NA	0.489535	0.397413	ID=COSM1389976,COSM1389975;OCCURENCE=1(large_intestine)	0.21	NA	4.1861316
1233	1	226570840	226570840	T	C	exonic	PARP1	NA	synonymous SNV	PARP1:NM_001618:exon8:c.A1056G:p.K352K	exonic	ENSG00000143799	NA	synonymous SNV	ENSG00000143799:ENST00000366794:exon8:c.A1056G:p.K352K	Score=552;Name=lod=233	NA	1q42.12	NA	NA	NA	NA	rs1805415	0.74	0.74	0.76	0.789337	0.8459	0.5635	0.6455	0.9123	0.8998	0.83	0.54	0.67	0.89	0.7939	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.500527	NA	NA	0.840814	0.89764	NA	0.79	NA	4.1860526
1233	2	105295074	105295074	G	A	intergenic	LOC150568,LOC284998	dist=165859;dist=68021	NA	NA	ncRNA_exonic	ENSG00000225669	NA	NA	NA	Score=723;Name=lod=1157	NA	2q12.1	NA	NA	NA	NA	rs11889916	0.61	0.61	0.585	0.566294	0.8141	0.5863	0.647	0.205	0.7219	0.83	0.61	0.68	0.2	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.635981	2.635981	NA	NA	NA	NA	0.551	NA	4.1859
1233	11	17496516	17496516	A	G	exonic	ABCC8	NA	synonymous SNV	ABCC8:NM_000352:exon2:c.T207C:p.P69P	exonic	ENSG00000006071	NA	synonymous SNV	ENSG00000006071:ENST00000302539:exon2:c.T207C:p.P69P,ENSG00000006071:ENST00000389817:exon2:c.T207C:p.P69P,ENSG00000006071:ENST00000527905:exon2:c.T207C:p.P69P	NA	NA	11p15.1	NA	NA	NA	NA	rs1048099	0.44	0.44	0.443	0.439297	0.497	0.3611	0.5432	0.3729	0.4765	0.49	0.39	0.52	0.39	0.474	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.752273	NA	NA	0.510249	0.411591	NA	0.478	NA	4.1854176
1233	19	20296738	20296738	C	G	intronic	ZNF486	NA	NA	NA	ncRNA_intronic	ENSG00000267383	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs836897	0.29	0.29	0.272	0.288538	0.1481	0.4583	0.3112	0.267	0.271	0.15	0.5	0.28	0.26	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.072708	NA	NA	NA	NA	NA	0.246	NA	4.1852333
1233	5	148590423	148590423	T	C	intronic	ABLIM3	NA	NA	NA	ncRNA_intronic	ENSG00000248647	NA	NA	NA	NA	NA	5q32	NA	Name=ZNF263	NA	NA	rs2918281	0.47	0.47	0.456	0.498403	0.3539	0.6587	0.3804	0.5673	0.4724	0.34	0.63	0.37	0.56	0.4162	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.003737	NA	NA	0.378023	0.555606	NA	0.486	NA	4.1852103
1233	1	22149935	22149935	T	C	exonic	HSPG2	NA	synonymous SNV	HSPG2:NM_005529:exon97:c.A13050G:p.S4350S	exonic	ENSG00000142798	NA	synonymous SNV	ENSG00000142798:ENST00000374695:exon97:c.A13050G:p.S4350S	Score=487;Name=lod=127	NA	1p36.12	NA	NA	NA	NA	rs897467	0.78	0.78	0.803	0.780351	0.833	0.8155	0.7493	0.677	0.8517	0.82	0.81	0.74	0.7	0.8204	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.902036	1.902036	NA	0.828096	0.722323	NA	0.681	NA	4.1851706
1234	1	206224412	206224412	T	C	UTR5	AVPR1B	NM_000707:c.-29T>C	NA	NA	UTR5	ENSG00000198049	ENST00000367126:c.-29T>C	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs35608965	0.05	0.05	0.053	0.0591054	0.0507	0.006	0.0403	0.1248	0.047	0.05	0.01	0.05	0.12	0.0526	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.781479	NA	NA	0.045115	0.083676	NA	0.123	NA	4.1849184
1234	8	28997850	28997850	A	G	intronic	KIF13B	NA	NA	NA	ncRNA_intronic	ENSG00000254129	NA	NA	NA	NA	NA	8p12	NA	NA	NA	NA	rs2279444	0.22	0.22	0.204	0.226038	0.1491	0.2371	0.3689	0.23	0.1871	0.15	0.24	0.34	0.22	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.076197	NA	NA	NA	NA	NA	0.29	NA	4.1842333
1234	1	54483694	54483694	C	T	intronic	LDLRAD1	NA	NA	NA	intronic	ENSG00000203985	NA	NA	NA	NA	NA	1p32.3	NA	Name=Pol2	NA	NA	rs34764952	0.39	0.39	0.358	0.344449	0.4105	0.5565	0.4942	0.09	0.2955	0.4	0.56	0.46	0.12	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.277754	NA	NA	0.405405	0.12211	NA	0.268	NA	4.184095
1234	16	84494168	84494168	A	T	intronic	ATP2C2	NA	NA	NA	ncRNA_exonic	ENSG00000261286	NA	NA	NA	NA	NA	16q24.1	NA	NA	NA	NA	rs62050916	0.04	0.04	0.028	0.0353435	0.0934	0.0079	0.049	0.0068	0.0327	0.08	0.0017	0.07	0.01	0.056	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.677908	NA	NA	NA	NA	NA	0.022	NA	4.1839333
1234	4	74804923	74804923	G	T	intergenic	CXCL1,PF4	dist=67904;dist=41619	NA	NA	ncRNA_exonic	ENSG00000249920	NA	NA	NA	Score=562;Name=lod=257	NA	4q13.3	NA	NA	NA	NA	rs6446970	0.66	0.66	0.585	0.578275	0.8161	0.8323	0.7493	0.1059	0.589	0.83	0.83	0.76	0.11	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.469912	NA	NA	NA	NA	NA	0.558	NA	4.1839
1234	9	75783937	75783937	A	G	intronic	ANXA1	NA	NA	NA	intronic	ENSG00000135046	NA	NA	NA	Score=452;Name=lod=92	NA	9q21.13	NA	Name=Pol2(phosphoS2),Pol2(b)	NA	NA	rs3739959	0.49	0.49	0.499	0.471046	0.6322	0.1716	0.5288	0.6241	0.3661	0.63	0.19	0.55	0.6	0.5558	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.291677	3.291677	NA	0.628605	0.61212	NA	0.507	NA	4.183395
1234	10	99349538	99349538	G	T	UTR5	C10orf62	NM_001009997:c.-117G>T	NA	NA	UTR5	ENSG00000203942	ENST00000370640:c.-117G>T	NA	NA	NA	NA	10q24.2	NA	NA	NA	NA	rs11540693	0.07	0.07	0.056	0.0688898	0.1501	0.0357	0.0677	0.0061	0.1053	0.15	0.04	0.06	0.01	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.445115	3.445115	NA	NA	NA	NA	0.051	NA	4.1832334
1234	12	1919543	1919543	C	T	intronic	CACNA2D4	NA	NA	NA	intronic	ENSG00000151062	NA	NA	NA	NA	NA	12p13.33	NA	Name=FOSL2,eGFP-FOS	Name=39	NA	rs2286377	0.52	0.52	0.519	0.46226	0.6123	0.5714	0.4452	0.23	0.5215	0.62	0.62	0.49	0.26	0.5749	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.944505	NA	NA	0.62982	0.314548	NA	0.594	NA	4.18298
1234	11	55061239	55061239	G	A	ncRNA_intronic	TRIM51HP	NA	NA	NA	ncRNA_intronic	ENSG00000166007	NA	NA	NA	NA	NA	11q11	NA	NA	NA	NA	rs11229021	0.4	0.4	0.359	0.41254	0.4841	0.5397	0.5533	0.1853	0.4151	0.45	0.49	0.52	0.13	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.029362	NA	NA	NA	NA	NA	0.138	NA	4.1825666
1234	4	2831383	2831383	T	G	exonic	SH3BP2	NA	synonymous SNV	SH3BP2:NM_001122681:exon8:c.T750G:p.A250A,SH3BP2:NM_001145855:exon8:c.T834G:p.A278A,SH3BP2:NM_001145856:exon8:c.T921G:p.A307A,SH3BP2:NM_003023:exon8:c.T750G:p.A250A	exonic	ENSG00000087266	NA	synonymous SNV	ENSG00000087266:ENST00000356331:exon8:c.T750G:p.A250A,ENSG00000087266:ENST00000435136:exon8:c.T750G:p.A250A,ENSG00000087266:ENST00000442312:exon8:c.T834G:p.A278A,ENSG00000087266:ENST00000452765:exon8:c.T750G:p.A250A,ENSG00000087266:ENST00000503393:exon8:c.T921G:p.A307A,ENSG00000087266:ENST00000511747:exon8:c.T750G:p.A250A	NA	NA	4p16.3	NA	NA	NA	NA	rs231399	0.45	0.45	0.435	0.466254	0.4851	0.4712	0.5245	0.3533	0.5532	0.48	0.45	0.53	0.34	0.5037	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.839449	NA	NA	0.495349	0.374262	ID=COSM1131132;OCCURENCE=1(prostate)	0.428	NA	4.1825176
1234	3	156262232	156262232	C	G	intronic	SSR3	NA	NA	NA	intronic	ENSG00000114850	NA	NA	NA	NA	NA	3q25.31	NA	NA	Name=3	NA	rs6792998	0.33	0.33	0.343	0.34385	0.2803	0.3829	0.2925	0.4002	0.3292	0.27	0.34	0.25	0.47	0.2867	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.315696	NA	NA	0.25093	0.378348	NA	0.312	NA	4.18207
1234	19	51456015	51456015	G	A	UTR5	KLK5	NM_001077491:c.-102C>T,NM_012427:c.-102C>T	NA	NA	ncRNA_splicing	ENSG00000269495	ENST00000601506:exon2:c.124-1G>A,ENST00000594939:exon2:c.122-1G>A	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs11553092	0.41	0.41	0.356	0.392772	0.3181	0.7183	0.438	0.1301	0.4571	0.33	0.75	0.39	0.15	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.519096	NA	NA	NA	NA	NA	0.384	NA	4.1819
1234	4	99337881	99337881	C	T	intronic	RAP1GDS1	NA	NA	NA	intronic	ENSG00000138698	NA	NA	NA	NA	Name=Biochemical measures	4q23	NA	NA	NA	NA	rs10516430	0.22	0.22	0.215	0.231629	0.2753	0.253	0.2176	0.115	0.3323	0.27	0.27	0.21	0.12	0.2612	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.753576	3.753576	NA	0.281932	0.148007	NA	0.217	NA	4.181568
1234	12	11201041	11201041	A	G	ncRNA_intronic	PRH1-PRR4	NA	NA	NA	ncRNA_exonic	ENSG00000256019	NA	NA	NA	NA	NA	12p13.2	NA	NA	NA	NA	rs2708319	0.39	0.39	0.35	0.336861	0.4851	0.1925	0.4625	0.3434	0.2352	0.51	0.22	0.43	0.36	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.019334	NA	NA	NA	NA	NA	0.399	NA	4.1815666
1234	12	11201487	11201487	T	C	ncRNA_intronic	PRH1-PRR4	NA	NA	NA	ncRNA_exonic	ENSG00000256019	NA	NA	NA	NA	NA	12p13.2	NA	NA	NA	NA	rs2597985	0.39	0.39	0.367	0.336861	0.4851	0.1925	0.4625	0.3434	0.2352	0.51	0.22	0.43	0.36	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.01529	NA	NA	NA	NA	NA	0.406	NA	4.1815666
1234	12	11201629	11201629	G	A	ncRNA_intronic	PRH1-PRR4	NA	NA	NA	ncRNA_exonic	ENSG00000256019	NA	NA	NA	NA	NA	12p13.2	NA	NA	NA	NA	rs2599394	0.39	0.39	0.359	0.336861	0.4851	0.1925	0.4625	0.3434	0.2352	0.51	0.22	0.43	0.36	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.316556	NA	NA	NA	NA	NA	0.406	NA	4.1815666
1234	2	202050677	202050677	A	G	exonic	CASP10	NA	synonymous SNV	CASP10:NM_001206524:exon2:c.A177G:p.S59S,CASP10:NM_001206542:exon2:c.A177G:p.S59S,CASP10:NM_001230:exon2:c.A177G:p.S59S,CASP10:NM_032974:exon2:c.A177G:p.S59S,CASP10:NM_032976:exon2:c.A177G:p.S59S,CASP10:NM_032977:exon2:c.A177G:p.S59S	exonic	ENSG00000003400	NA	synonymous SNV	ENSG00000003400:ENST00000272879:exon2:c.A177G:p.S59S,ENSG00000003400:ENST00000286186:exon2:c.A177G:p.S59S,ENSG00000003400:ENST00000313728:exon2:c.A177G:p.S59S,ENSG00000003400:ENST00000346817:exon2:c.A177G:p.S59S,ENSG00000003400:ENST00000360132:exon2:c.A177G:p.S59S,ENSG00000003400:ENST00000374650:exon2:c.A177G:p.S59S,ENSG00000003400:ENST00000438843:exon2:c.A177G:p.S59S,ENSG00000003400:ENST00000448480:exon2:c.A177G:p.S59S	NA	NA	2q33.1	NA	NA	NA	NA	rs3900115	0.4	0.4	0.399	0.394169	0.5119	0.2192	0.402	0.4887	0.32	0.5	0.19	0.42	0.49	0.4524	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.278624	NA	NA	0.521047	0.488879	NA	0.413	NA	4.1813196
1234	18	55283236	55283236	T	C	intronic	NARS	NA	NA	NA	exonic	ENSG00000134440	NA	nonsynonymous SNV	ENSG00000134440:ENST00000590123:exon3:c.A109G:p.N37D	NA	NA	18q21.31	NA	NA	NA	NA	rs9319918	0.19	0.19	0.18	0.183906	0.337	0.0119	0.2464	0.171	0.1769	0.33	0.01	0.23	0.15	0.2917	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.175515	NA	NA	0.356711	0.197685	NA	0.297	NA	4.1812557
1234	19	49519855	49519855	T	G	exonic	LHB	NA	synonymous SNV	LHB:NM_000894:exon2:c.A132C:p.P44P	exonic	ENSG00000104826	NA	synonymous SNV	ENSG00000104826:ENST00000221421:exon2:c.A132C:p.P44P	NA	NA	19q13.33	NA	NA	NA	NA	rs1056914	0.43	0.43	0.349	0.51897	0.504	0.2798	0.5793	0.6876	0.5102	0.43	0.26	0.48	0.6	0.5136	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.350134	NA	NA	0.467885	0.634362	NA	0.551	NA	4.1811816
1234	9	125316042	125316042	T	C	exonic	OR1N2	NA	synonymous SNV	OR1N2:NM_001004457:exon1:c.T594C:p.P198P	exonic	ENSG00000171501	NA	synonymous SNV	ENSG00000171501:ENST00000373688:exon1:c.T594C:p.P198P	NA	NA	9q33.2	NA	NA	NA	NA	rs1341043	0.55	0.55	0.513	0.558906	0.4791	0.6637	0.5908	0.5961	0.4601	0.47	0.62	0.58	0.57	0.517	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.217747	NA	NA	0.489767	0.57399	NA	0.428	NA	4.1807996
1234	16	57951394	57951394	T	G	intronic	CNGB1	NA	NA	NA	intronic	ENSG00000070729	NA	NA	NA	NA	NA	16q21	NA	Name=Pol2	NA	NA	rs3991715	0.28	0.28	0.281	0.308706	0.2883	0.1776	0.2262	0.4728	0.3016	0.26	0.2	0.26	0.43	0.2746	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.789702	NA	NA	0.256361	0.417106	NA	0.362	NA	4.180739
1234	20	47256300	47256300	C	T	intronic	PREX1	NA	NA	NA	intronic	ENSG00000124126	NA	NA	NA	NA	NA	20q13.13	Score=752;Name=V$PPARA_01	NA	NA	NA	rs6019339	0.32	0.32	0.308	0.367212	0.2664	0.2262	0.3084	0.5613	0.3957	0.25	0.22	0.34	0.53	0.3013	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.014215	NA	NA	0.251744	0.525647	NA	0.283	NA	4.180556
1234	9	125315778	125315778	G	C	exonic	OR1N2	NA	synonymous SNV	OR1N2:NM_001004457:exon1:c.G330C:p.S110S	exonic	ENSG00000171501	NA	synonymous SNV	ENSG00000171501:ENST00000373688:exon1:c.G330C:p.S110S	NA	NA	9q33.2	NA	NA	NA	NA	rs1411271	0.55	0.55	0.53	0.559505	0.4791	0.6677	0.5908	0.5953	0.4601	0.47	0.62	0.58	0.57	0.5174	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.518706	NA	NA	0.489651	0.57399	NA	0.428	NA	4.1805156
1234	16	50328526	50328526	C	T	intronic	ADCY7	NA	NA	NA	intronic	ENSG00000121281	NA	NA	NA	NA	NA	16q12.1	NA	Name=NRSF	NA	NA	rs2302717	0.38	0.38	0.346	0.414936	0.2058	0.8036	0.366	0.2179	0.5307	0.21	0.81	0.32	0.19	0.4215	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.178608	NA	NA	0.192227	0.22599	NA	0.312	NA	4.180473
1234	19	18256163	18256163	T	G	intronic	MAST3	NA	NA	NA	ncRNA_intronic	ENSG00000269145	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs62123605	0.11	0.11	0.098	0.0842652	0.1531	0.123	0.1182	0.0159	0.0419	0.16	0.1	0.12	0.02	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.472741	NA	NA	NA	NA	NA	0.058	NA	4.1802333
1234	11	118888619	118888619	A	G	intronic	RPS25	NA	NA	NA	intronic	ENSG00000118181	NA	NA	NA	NA	NA	11q23.3	NA	Name=p300	NA	NA	rs11602764	0.26	0.26	0.287	0.327875	0.2704	0.128	0.2594	0.5144	0.3896	0.25	0.1	0.28	0.48	0.2783	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.528709	NA	NA	0.271129	0.478864	NA	0.391	NA	4.180171
1234	11	49013161	49013161	T	C	intergenic	OR4A47,TRIM49B	dist=501887;dist=39991	NA	NA	ncRNA_exonic	ENSG00000254764	NA	NA	NA	Score=410;Name=lod=62	NA	11p11.12	NA	NA	NA	NA	rs1827725	0.75	0.75	0.77	0.708267	0.8201	0.5972	0.7622	0.8094	0.5327	0.8	0.63	0.78	0.77	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.412869	NA	NA	NA	NA	NA	0.312	NA	4.1799
1234	16	66614097	66614097	G	C	intronic	CMTM2	NA	NA	NA	ncRNA_exonic	ENSG00000260650	NA	NA	NA	NA	NA	16q21	NA	NA	NA	NA	rs2290181	0.08	0.08	0.079	0.0900559	0.0517	0.1101	0.147	0.0598	0.1094	0.05	0.11	0.13	0.06	0.0732	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.351996	1.351996	NA	0.028953	0.06338	ID=COSM148090;OCCURENCE=1(stomach)	0.043	NA	4.1794803
1234	19	5587240	5587240	G	A	UTR3	SAFB2	NM_014649:c.*14C>T	NA	NA	UTR3	ENSG00000130254	ENST00000252542:c.*14C>T	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs73920021	0.09	0.09	0.081	0.101837	0.0417	0.0159	0.0504	0.233	0.1115	0.04	0.02	0.07	0.25	0.0651	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.262603	NA	NA	0.047104	0.190422	NA	0.094	NA	4.1794294
1234	4	77021433	77021433	C	T	intronic	ART3	NA	NA	NA	intronic	ENSG00000156219	NA	NA	NA	NA	NA	4q21.1	NA	NA	Name=9	NA	rs6532189	0.33	0.33	0.319	0.307508	0.2783	0.3522	0.2536	0.4304	0.1636	0.27	0.37	0.27	0.43	0.2746	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.170428	NA	NA	0.267674	0.401725	NA	0.239	NA	4.179426
1234	16	57748845	57748845	T	C	intronic	CCDC135	NA	NA	NA	ncRNA_exonic	ENSG00000260438	NA	NA	NA	NA	NA	16q21	NA	NA	NA	NA	rs9922246	0.21	0.21	0.211	0.202276	0.1541	0.2629	0.2536	0.2171	0.1329	0.16	0.25	0.22	0.24	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.469929	NA	NA	NA	NA	NA	0.174	NA	4.1792333
1234	5	80502736	80502736	C	G	ncRNA_intronic	RNU5D-1,RNU5E-1	NA	NA	NA	ncRNA_intronic	ENSG00000247572	NA	NA	NA	NA	NA	5q14.1	NA	NA	NA	NA	rs6453542	0.21	0.21	0.234	0.227236	0.1491	0.2778	0.1744	0.2769	0.226	0.15	0.27	0.17	0.28	0.1834	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.322949	1.322949	NA	0.155233	0.247844	NA	0.152	NA	4.1789336
1234	19	53612311	53612311	T	C	exonic	ZNF415	NA	synonymous SNV	ZNF415:NM_001136038:exon4:c.A987G:p.T329T,ZNF415:NM_001164309:exon4:c.A987G:p.T329T,ZNF415:NM_018355:exon4:c.A987G:p.T329T	exonic	ENSG00000170954	NA	synonymous SNV	ENSG00000170954:ENST00000601493:exon3:c.A297G:p.T99T,ENSG00000170954:ENST00000243643:exon4:c.A987G:p.T329T,ENSG00000170954:ENST00000500065:exon4:c.A987G:p.T329T,ENSG00000170954:ENST00000421033:exon5:c.A1023G:p.T341T,ENSG00000170954:ENST00000440291:exon5:c.A948G:p.T316T,ENSG00000170954:ENST00000448501:exon6:c.A1131G:p.T377T,ENSG00000170954:ENST00000455735:exon7:c.A1131G:p.T377T	NA	NA	19q13.42	NA	NA	NA	NA	rs4803051	0.49	0.49	0.455	0.477436	0.496	0.6151	0.6254	0.2405	0.5317	0.5	0.6	0.62	0.24	0.5042	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.204034	NA	NA	0.487558	0.2803	NA	0.442	NA	4.1789086
1234	4	69862742	69862742	A	G	intergenic	UGT2A3,UGT2B10	dist=45233;dist=7553	NA	NA	ncRNA_exonic	ENSG00000250277	NA	NA	NA	Score=744;Name=lod=1407	NA	4q13.2	NA	NA	NA	NA	rs4088518	0.64	0.64	0.607	0.66254	0.8211	0.4444	0.745	0.6074	0.7403	0.8	0.43	0.72	0.56	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.139532	NA	NA	NA	NA	NA	0.739	NA	4.1789
1234	19	43835613	43835613	C	G	intergenic	PSG9,PRG1	dist=61931;dist=17595	NA	NA	upstream	ENSG00000231412	NA	NA	NA	NA	NA	19q13.31	NA	Name=ZNF263	NA	NA	rs28735852	0.39	0.39	0.362	0.363618	0.3211	0.6062	0.3559	0.3185	0.2239	0.31	0.58	0.38	0.3	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.298121	NA	NA	NA	NA	NA	0.304	NA	4.1789
1234	13	113801737	113801737	C	T	exonic	F10	NA	synonymous SNV	F10:NM_000504:exon7:c.C792T:p.T264T	exonic	ENSG00000126218	NA	synonymous SNV	ENSG00000126218:ENST00000375551:exon7:c.C792T:p.T264T,ENSG00000126218:ENST00000375559:exon7:c.C792T:p.T264T,ENSG00000126218:ENST00000409306:exon7:c.C792T:p.T264T	Score=436;Name=lod=79	NA	13q34	NA	NA	NA	NA	rs5960	0.66	0.66	0.649	0.623203	0.8648	0.5238	0.6715	0.4463	0.682	0.87	0.54	0.68	0.47	0.7597	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.842003	NA	NA	0.863372	0.496596	ID=COSM147720;OCCURENCE=1(stomach)	0.652	NA	4.1787946
1234	4	74453656	74453656	G	A	intronic	RASSF6	NA	NA	NA	intronic	ENSG00000169435	NA	NA	NA	Score=505;Name=lod=151	NA	4q13.3	NA	NA	NA	NA	rs10019146	0.25	0.25	0.215	0.262181	0.2833	0.1141	0.4712	0.2716	0.2321	0.28	0.11	0.41	0.25	0.2624	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.489561	NA	NA	0.27593	0.293143	NA	0.283	NA	4.17837
1234	2	128409419	128409419	A	G	UTR3	GPR17	NM_001161415:c.*90A>G,NM_005291:c.*90A>G,NM_001161417:c.*90A>G,NM_001161416:c.*90A>G	NA	NA	UTR3	ENSG00000144230	ENST00000544369:c.*90A>G,ENST00000272644:c.*90A>G	NA	NA	NA	NA	2q14.3	NA	NA	NA	NA	rs13021001	0.12	0.12	0.111	0.139976	0.1551	0.1607	0.1196	0.0303	0.2658	0.15	0.15	0.13	0.04	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.74972	NA	NA	NA	NA	NA	0.08	NA	4.1782334
1234	1	7879627	7879627	C	T	intronic	PER3	NA	NA	NA	ncRNA_intronic	ENSG00000236266	NA	NA	NA	NA	NA	1p36.23	NA	NA	NA	NA	rs10462018	0.12	0.12	0.114	0.109225	0.1561	0.0685	0.0951	0.1649	0.0378	0.16	0.03	0.12	0.17	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.984786	NA	NA	NA	NA	NA	0.123	NA	4.1772333
1234	1	248166526	248166526	T	C	intronic	OR2L13	NA	NA	NA	ncRNA_exonic	ENSG00000232215	NA	NA	NA	NA	NA	1q44	NA	NA	NA	NA	rs61856388	0.34	0.34	0.345	0.347045	0.1561	0.3016	0.1484	0.7852	0.1391	0.15	0.35	0.16	0.78	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.509406	NA	NA	NA	NA	NA	0.304	NA	4.1772333
1234	11	49860915	49860915	C	G	intergenic	LOC440040,OR4C13	dist=28946;dist=113028	NA	NA	upstream	ENSG00000219061	NA	NA	NA	Score=409;Name=lod=61	NA	11p11.12	NA	NA	NA	NA	rs12806461	0.34	0.34	0.3	0.314097	0.3231	0.2808	0.2176	0.4493	0.2249	0.33	0.28	0.23	0.48	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.322742	NA	NA	NA	NA	NA	0.348	NA	4.1769
1234	12	57920262	57920262	T	G	intronic	MBD6	NA	NA	NA	intronic	ENSG00000166987	NA	NA	NA	NA	NA	12q13.3	Score=821;Name=V$RREB1_01	NA	NA	NA	rs2127318	0.65	0.65	0.615	0.627196	0.8231	0.7232	0.8069	0.1649	0.8241	0.82	0.72	0.81	0.2	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.000785	NA	NA	NA	NA	NA	0.601	NA	4.1769
1234	1	233767059	233767059	T	C	intronic	KCNK1	NA	NA	NA	intronic	ENSG00000135750	NA	NA	NA	NA	NA	1q42.2	NA	Name=TAL1_(SC-12984)	NA	NA	rs701226	0.4	0.4	0.433	0.428315	0.2465	0.3542	0.2723	0.8011	0.2986	0.25	0.35	0.28	0.79	0.3142	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.311761	NA	NA	0.262431	0.719749	NA	0.42	NA	4.176869
1234	3	52540773	52540773	T	C	exonic	STAB1	NA	synonymous SNV	STAB1:NM_015136:exon18:c.T1896C:p.G632G	exonic	ENSG00000010327	NA	synonymous SNV	ENSG00000010327:ENST00000321725:exon18:c.T1896C:p.G632G	NA	NA	3p21.1	NA	NA	NA	NA	rs1010553	0.54	0.54	0.525	0.638778	0.4682	0.5446	0.4265	0.8601	0.7628	0.46	0.48	0.41	0.82	0.5426	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.04421	NA	NA	0.479065	0.820926	NA	0.609	NA	4.1768016
1234	1	8928125	8928125	G	T	intronic	ENO1	NA	NA	NA	intronic	ENSG00000074800	NA	NA	NA	NA	NA	1p36.23	NA	Name=Pol2,Pol2-4H8	NA	NA	rs2071412	0.38	0.38	0.361	0.34345	0.2445	0.7401	0.4135	0.1233	0.2843	0.25	0.76	0.4	0.14	0.3178	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.002035	NA	NA	0.26093	0.16296	NA	0.254	NA	4.17677
1234	7	48312674	48312674	G	A	exonic	ABCA13	NA	synonymous SNV	ABCA13:NM_152701:exon17:c.G3411A:p.V1137V	exonic	ENSG00000179869	NA	synonymous SNV	ENSG00000179869:ENST00000435803:exon17:c.G3411A:p.V1137V	NA	NA	7p12.3	NA	NA	NA	NA	rs1358066	0.57	0.57	0.543	0.57528	0.4632	0.7708	0.5101	0.5507	0.5685	0.46	0.77	0.52	0.53	0.5356	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.742765	NA	NA	0.491194	0.501902	ID=COSM150288,COSM150289;OCCURENCE=1(stomach)	0.638	NA	4.1766726
1234	15	101591784	101591784	C	T	intronic	LRRK1	NA	NA	NA	ncRNA_intronic	ENSG00000259755	NA	NA	NA	NA	NA	15q26.3	NA	NA	NA	NA	rs13329684	0.14	0.14	0.147	0.147564	0.1571	0.0387	0.0951	0.264	0.1299	0.16	0.04	0.11	0.26	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.064867	NA	NA	NA	NA	NA	0.152	NA	4.1762333
1234	15	101591834	101591834	G	A	intronic	LRRK1	NA	NA	NA	ncRNA_intronic	ENSG00000259755	NA	NA	NA	NA	NA	15q26.3	NA	NA	NA	NA	rs13329662	0.14	0.14	0.145	0.146965	0.1571	0.0387	0.0951	0.2617	0.1299	0.16	0.04	0.11	0.26	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.109873	NA	NA	NA	NA	NA	0.152	NA	4.1762333
1234	1	247655516	247655516	C	T	UTR3	OR2W5	NM_001004698:c.*124C>T	NA	NA	ncRNA_exonic	ENSG00000203664	NA	NA	NA	NA	NA	1q44	NA	NA	NA	NA	rs12123109	0.26	0.26	0.27	0.246006	0.3241	0.2619	0.2233	0.1785	0.2566	0.33	0.29	0.23	0.16	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.80837	NA	NA	NA	NA	NA	0.254	NA	4.1759
1234	13	111590169	111590169	C	T	intergenic	ANKRD10,ARHGEF7	dist=22753;dist=177455	NA	NA	ncRNA_exonic	ENSG00000227105	NA	NA	NA	Score=587;Name=lod=325	NA	13q34	NA	NA	NA	NA	rs7338011	0.76	0.76	0.697	0.729233	0.8241	0.9256	0.7911	0.4349	0.7832	0.81	0.93	0.79	0.45	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.279558	NA	NA	NA	NA	NA	0.754	NA	4.1759
1234	13	111591170	111591170	G	A	intergenic	ANKRD10,ARHGEF7	dist=23754;dist=176454	NA	NA	ncRNA_exonic	ENSG00000227105	NA	NA	NA	NA	NA	13q34	NA	Name=Rad21,CTCF	NA	NA	rs7333318	0.72	0.72	0.685	0.691494	0.8241	0.8641	0.781	0.3434	0.7843	0.82	0.86	0.78	0.37	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.067426	NA	NA	NA	NA	NA	0.703	NA	4.1759
1234	15	22298495	22298495	G	C	ncRNA_intronic	LOC727924	NA	NA	NA	ncRNA_intronic	ENSG00000259176	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs2115633	NA	NA	0.559	0.551318	0.4911	0.6022	0.5187	0.6021	0.5153	NA	NA	NA	NA	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.586799	NA	NA	NA	NA	NA	0.572	NA	4.1755666
1234	16	56652051	56652051	C	A	ncRNA_intronic	MT1L	NA	NA	NA	ncRNA_intronic	ENSG00000260549	NA	NA	NA	NA	NA	16q12.2	NA	NA	NA	NA	rs2018703	0.45	0.45	0.415	0.422125	0.4911	0.504	0.4366	0.3366	0.3722	0.49	0.49	0.44	0.35	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.25375	NA	NA	NA	NA	NA	0.428	NA	4.1755666
1234	14	95109833	95109833	G	A	ncRNA_exonic	SERPINA13P	NA	NA	NA	ncRNA_exonic	ENSG00000187483	NA	NA	NA	NA	NA	14q32.13	NA	NA	NA	NA	rs17826595	0.09	0.09	0.081	0.0826677	0.1928	0.0109	0.0965	0.0325	0.1012	0.18	0.01	0.1	0.02	0.1268	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.214581	NA	0.3	0.171744	0.055379	NA	0.058	NA	4.1753226
1234	3	86063253	86063253	T	C	intronic	CADM2	NA	NA	NA	ncRNA_exonic	ENSG00000243915	NA	NA	NA	NA	NA	3p12.1	NA	NA	NA	NA	rs79960578	0.17	0.17	0.149	0.19389	0.1581	0.2083	0.1614	0.1778	0.2607	0.15	0.21	0.16	0.17	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.324587	NA	NA	NA	NA	NA	0.225	NA	4.1752333
1234	7	39368609	39368609	T	C	intronic	POU6F2	NA	NA	NA	ncRNA_exonic	ENSG00000206947	NA	NA	NA	NA	NA	7p14.1	NA	NA	NA	NA	rs17619162	0.12	0.12	0.112	0.0816693	0.1581	0.127	0.0922	0.0144	0.0399	0.16	0.15	0.1	0.02	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.082964	NA	NA	NA	NA	NA	0.08	NA	4.1752333
1234	7	147092615	147092615	C	T	ncRNA_intronic	MIR548I4	NA	NA	NA	intronic	ENSG00000174469	NA	NA	NA	NA	NA	7q35	NA	NA	NA	NA	rs700308	0.19	0.19	0.185	0.174321	0.1581	0.3254	0.183	0.0734	0.1656	0.16	0.33	0.19	0.07	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.648398	NA	NA	NA	NA	NA	0.116	NA	4.1752333
1234	14	71061956	71061956	T	C	intronic	MED6	NA	NA	NA	ncRNA_exonic	ENSG00000258951	NA	NA	NA	NA	NA	14q24.2	NA	NA	NA	NA	rs7158848	0.34	0.34	0.373	0.334665	0.1581	0.5595	0.1556	0.4652	0.2352	0.16	0.56	0.14	0.5	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.129636	NA	NA	NA	NA	NA	0.384	NA	4.1752333
1235	7	132854875	132854875	C	T	intergenic	CHCHD3,EXOC4	dist=88047;dist=82948	NA	NA	ncRNA_exonic	ENSG00000237821	NA	NA	NA	Score=766;Name=lod=1728	NA	7q33	NA	NA	NA	NA	rs10259794	0.84	0.84	0.798	0.859425	0.825	0.9365	0.8876	0.761	0.9284	0.81	0.94	0.87	0.72	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.139542	NA	NA	NA	NA	NA	0.819	NA	4.175
1235	5	141016288	141016288	T	G	intronic	HDAC3	NA	NA	NA	intronic	ENSG00000171720	NA	NA	NA	NA	NA	5q31.3	NA	Name=CCNT2,AP-2gamma,HEY1,HA-E2F1,Pol2-4H8,Pol2,Pol2(phosphoS2),TAF1,ETS1	Name=27	NA	rs1421896	0.62	0.62	0.597	0.65635	0.5825	0.3472	0.7147	0.9251	0.6462	0.6	0.35	0.71	0.9	0.6339	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.144818	NA	NA	0.608721	0.873808	NA	0.667	NA	4.174879
1235	1	117487710	117487710	A	G	exonic	PTGFRN	NA	synonymous SNV	PTGFRN:NM_020440:exon3:c.A828G:p.P276P	exonic	ENSG00000134247	NA	synonymous SNV	ENSG00000134247:ENST00000393203:exon3:c.A828G:p.P276P	NA	NA	1p13.1	Score=847;Name=V$ZID_01	NA	NA	NA	rs10159095	0.78	0.78	0.07	0.859425	0.8966	0.8452	0.9222	0.7549	0.9325	0.81	0.81	0.85	0.65	0.8916	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.750391	NA	NA	0.703768	0.529732	NA	NA	NA	4.1746986
1235	3	129826031	129826031	C	T	ncRNA_intronic	FAM86HP	NA	NA	NA	ncRNA_intronic	ENSG00000251287,ENSG00000253540	NA	NA	NA	NA	NA	3q22.1	NA	NA	NA	NA	rs7428327	0.42	0.42	0.385	0.445887	0.493	0.4127	0.4222	0.3638	0.5593	0.48	0.39	0.44	0.35	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.402625	NA	NA	NA	NA	NA	0.428	NA	4.1736666
1235	7	100818101	100818101	A	G	intronic	NAT16	NA	NA	NA	intronic	ENSG00000167011	NA	NA	NA	Score=289;Name=lod=20	NA	7q22.1	NA	Name=NRSF,TCF12	NA	NA	rs733965	0.52	0.52	0.459	0.488419	0.6133	0.4722	0.6643	0.2988	0.5082	0.63	0.51	0.63	0.28	0.5939	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.932086	NA	NA	0.619269	0.326521	NA	0.471	NA	4.173531
1235	2	241831005	241831005	C	T	exonic	C2orf54	NA	synonymous SNV	C2orf54:NM_001085437:exon2:c.G690A:p.R230R,C2orf54:NM_024861:exon2:c.G186A:p.R62R	exonic	ENSG00000172478	NA	synonymous SNV	ENSG00000172478:ENST00000307486:exon2:c.G243A:p.R81R,ENSG00000172478:ENST00000388934:exon2:c.G690A:p.R230R,ENSG00000172478:ENST00000402775:exon2:c.G186A:p.R62R	NA	NA	2q37.3	NA	NA	NA	NA	rs10195453	0.52	0.52	0.547	0.526558	0.5179	0.4405	0.3473	0.7784	0.411	0.52	0.38	0.38	0.77	0.4803	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.607648	NA	NA	0.495193	0.739671	NA	0.667	NA	4.1732736
1235	19	10385743	10385743	C	G	intronic	ICAM1	NA	NA	NA	ncRNA_intronic	ENSG00000266978	NA	NA	NA	NA	NA	19p13.2	NA	NA	Name=5	NA	rs5030352	0.39	0.39	0.411	0.409944	0.3777	0.1746	0.2637	0.7579	0.319	0.38	0.16	0.28	0.75	0.3794	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.578529	NA	NA	0.403192	0.669322	NA	0.522	NA	4.1730413
1235	22	17414385	17414385	T	C	intergenic	HSFY1P1,GAB4	dist=104160;dist=28442	NA	NA	downstream	ENSG00000253481	NA	NA	NA	Score=466;Name=lod=104	NA	22q11.1	NA	NA	NA	NA	rs4819921	0.36	0.36	0.355	0.355831	0.327	0.5556	0.3905	0.2821	0.2546	0.3	0.53	0.35	0.26	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.023977	NA	NA	NA	NA	NA	0.319	NA	4.173
1235	2	86363074	86363074	A	G	ncRNA_exonic	SNORD94	NA	NA	NA	ncRNA_exonic	ENSG00000208772	NA	NA	NA	Score=412;Name=lod=63	NA	2p11.2	Score=791;Name=V$PAX2_01	NA	NA	NA	rs3770069	0.69	0.69	0.643	0.678115	0.84	0.6567	0.8271	0.3873	0.8211	0.84	0.67	0.85	0.36	0.8045	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.349086	NA	NA	0.849573	0.47089	NA	0.71	NA	4.1725936
1235	5	147020443	147020443	C	T	ncRNA_intronic	JAKMIP2-AS1	NA	NA	NA	intronic	ENSG00000176049	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs1529685	0.33	0.33	0.301	0.342252	0.161	0.5982	0.3602	0.3162	0.2873	0.14	0.61	0.29	0.32	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.120801	NA	NA	NA	NA	NA	0.29	NA	4.1723333
1235	3	14190237	14190237	T	G	intronic	XPC	NA	NA	NA	intronic	ENSG00000154767	NA	NA	NA	NA	NA	3p25.1	NA	Name=CTCF_(SC-5916),CTCF,TBP,Rad21,c-Myc	Name=19	NA	rs2279017	0.66	0.66	0.64	0.679712	0.5964	0.6657	0.7118	0.7352	0.682	0.59	0.65	0.72	0.71	0.6302	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.230386	NA	NA	0.601398	0.703221	NA	0.536	NA	4.172002
1235	2	219204728	219204728	C	T	intronic	PNKD	NA	NA	NA	ncRNA_intronic	ENSG00000237281	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs73088163	0.07	0.07	0.055	0.090655	0.0388	0.1716	0.0259	0.0424	0.1718	0.04	0.15	0.04	0.05	0.0697	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.571106	NA	NA	0.052907	0.039492	NA	0.058	NA	4.1719263
1235	2	241830969	241830969	G	A	exonic	C2orf54	NA	synonymous SNV	C2orf54:NM_001085437:exon2:c.C726T:p.S242S,C2orf54:NM_024861:exon2:c.C222T:p.S74S	exonic	ENSG00000172478	NA	synonymous SNV	ENSG00000172478:ENST00000307486:exon2:c.C279T:p.S93S,ENSG00000172478:ENST00000388934:exon2:c.C726T:p.S242S,ENSG00000172478:ENST00000402775:exon2:c.C222T:p.S74S	NA	NA	2q37.3	NA	NA	NA	NA	rs10171067	0.52	0.52	0.563	0.527157	0.5179	0.4415	0.3473	0.7799	0.411	0.52	0.38	0.38	0.77	0.4811	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.100703	NA	NA	0.49638	0.743345	NA	0.674	NA	4.1712866
1235	19	46289392	46289392	G	C	exonic	DMWD	NA	synonymous SNV	DMWD:NM_004943:exon3:c.C1362G:p.P454P	exonic	ENSG00000185800	NA	synonymous SNV	ENSG00000185800:ENST00000270223:exon3:c.C1362G:p.P454P,ENSG00000185800:ENST00000377735:exon3:c.C1362G:p.P454P	NA	NA	19q13.32	Score=810;Name=V$CMYB_01	NA	NA	NA	rs8110017	0.87	0.87	0.864	0.901158	0.7962	0.9216	0.8977	0.9796	0.8845	0.79	0.92	0.9	0.94	0.8663	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.861544	NA	NA	0.833166	0.942943	ID=COSM439803;OCCURENCE=1(breast)	0.819	NA	4.1710006
1235	20	1666989	1666989	C	A	intergenic	SIRPG,LOC100289473	dist=28564;dist=87022	NA	NA	ncRNA_intronic	ENSG00000223750	NA	NA	NA	Score=309;Name=lod=24	NA	20p13	NA	NA	NA	NA	rs202535	0.85	0.85	0.832	0.858227	0.829	1	0.8718	0.7179	0.9223	0.81	1	0.85	0.71	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.11578	NA	NA	NA	NA	NA	0.899	NA	4.171
1235	18	21100240	21100240	C	T	exonic	C18orf8	NA	synonymous SNV	C18orf8:NM_001276342:exon8:c.C780T:p.P260P,C18orf8:NM_013326:exon10:c.C924T:p.P308P	exonic	ENSG00000141452	NA	synonymous SNV	ENSG00000141452:ENST00000590868:exon8:c.C780T:p.P260P,ENSG00000141452:ENST00000269221:exon10:c.C924T:p.P308P,ENSG00000141452:ENST00000590870:exon10:c.C924T:p.P308P	NA	NA	18q11.2	NA	NA	NA	NA	rs1367083	0.63	0.63	0.598	0.619409	0.4742	0.8849	0.6513	0.5522	0.5634	0.48	0.92	0.59	0.55	0.5444	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.154365	NA	NA	0.477093	0.538357	NA	0.601	NA	4.1709736
1235	19	49399821	49399821	G	A	intronic	TULP2	NA	NA	NA	intronic	ENSG00000104804	NA	NA	NA	NA	NA	19q13.33	NA	NA	Name=2	NA	rs12461075	0.27	0.27	0.27	0.285144	0.2714	0.0685	0.268	0.469	0.2863	0.28	0.08	0.28	0.49	0.273	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.746059	NA	NA	0.284884	0.42601	NA	0.304	NA	4.170716
1235	15	84782417	84782417	A	C	ncRNA_exonic	EFTUD1P1	NA	NA	NA	ncRNA_exonic	ENSG00000259404	NA	NA	NA	NA	NA	15q25.2	NA	NA	NA	NA	rs11638297	0.15	0.15	0.132	0.131789	0.2724	0.0546	0.1772	0.0113	0.1973	0.28	0.06	0.2	0.02	0.2238	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.341876	NA	NA	NA	NA	NA	0.13	NA	4.1704666
1235	4	6891435	6891435	G	A	intergenic	KIAA0232,TBC1D14	dist=5536;dist=19736	NA	NA	intergenic	ENSG00000170871,ENSG00000132405	dist=5538;dist=19534	NA	NA	NA	NA	4p16.1	NA	Name=GATA-1	NA	NA	rs11734099	0.24	0.24	0.217	0.197684	0.163	0.5298	0.1671	0.0166	0.1575	0.16	0.57	0.17	0.03	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.290765	NA	NA	NA	NA	NA	0.138	NA	4.1703334
1235	4	6891455	6891455	T	G	intergenic	KIAA0232,TBC1D14	dist=5556;dist=19716	NA	NA	intergenic	ENSG00000170871,ENSG00000132405	dist=5558;dist=19514	NA	NA	NA	NA	4p16.1	NA	Name=GATA-1	NA	NA	rs11731274	0.24	0.24	0.208	0.203275	0.163	0.5308	0.1686	0.0363	0.1575	0.16	0.57	0.17	0.03	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.253585	NA	NA	NA	NA	NA	0.145	NA	4.1703334
1235	16	97354	97354	A	G	UTR3	POLR3K	NM_016310:c.*76T>C	NA	NA	UTR3	ENSG00000161980	ENST00000293860:c.*76T>C	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs8466	0.15	0.15	0.143	0.16853	0.163	NA	0.1542	0.3729	0.0818	0.16	NA	0.14	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.485856	NA	NA	NA	NA	NA	0.145	NA	4.1703334
1235	17	3343406	3343406	G	A	UTR3	SPATA22	NM_032598:c.*35C>T,NM_001170696:c.*35C>T,NM_001170695:c.*35C>T,NM_001170697:c.*35C>T,NM_001170699:c.*219C>T,NM_001170698:c.*35C>T	NA	NA	UTR3	ENSG00000141255	ENST00000573128:c.*35C>T,ENST00000575375:c.*35C>T,ENST00000355380:c.*35C>T,ENST00000572969:c.*35C>T,ENST00000397168:c.*35C>T,ENST00000541913:c.*35C>T	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs2257732	0.03	0.03	0.027	0.019369	0.0606	NA	0.0303	0.0053	0.0082	0.05	NA	0.05	0.01	0.041	0.061	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.652993	NA	NA	0.061467	0.009305	NA	0.072	NA	4.1702664
1235	7	56718292	56718292	C	T	intergenic	DKFZp434L192,LOC100130849	dist=153315;dist=224786	NA	NA	ncRNA_exonic	ENSG00000228303	NA	NA	NA	Score=284;Name=lod=19	NA	7p11.2	NA	NA	NA	NA	rs2634084	0.81	0.81	0.791	0.84405	0.83	0.628	0.8991	0.9652	0.8783	0.82	0.62	0.89	0.97	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.181324	NA	NA	NA	NA	NA	0.819	NA	4.17
1235	20	56064157	56064157	C	T	intergenic	MIR5095,CTCFL	dist=65879;dist=6864	NA	NA	upstream	ENSG00000124097	NA	NA	NA	Score=820;Name=lod=2867	NA	20q13.31	NA	NA	NA	NA	rs6128051	0.23	0.23	0.195	0.228235	0.33	0.2381	0.1816	0.0741	0.3548	0.34	0.23	0.19	0.09	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.169524	NA	NA	NA	NA	NA	0.319	NA	4.17
1235	16	72153125	72153125	C	G	UTR3	PMFBP1	NM_031293:c.*112G>C,NM_001160213:c.*112G>C	NA	NA	UTR3	ENSG00000118557	ENST00000237353:c.*112G>C,ENST00000537465:c.*578G>C,ENST00000355636:c.*112G>C,ENST00000379073:c.*3006G>C	NA	NA	NA	NA	16q22.2	NA	NA	NA	NA	rs4788459	0.08	0.08	0.072	0.0886581	0.164	0.0238	0.0648	0.0113	0.1994	0.18	0.02	0.07	0.02	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.594438	NA	NA	NA	NA	NA	0.138	NA	4.1693334
1235	1	27652359	27652359	G	A	ncRNA_exonic	LOC644961	NA	NA	NA	intronic	ENSG00000186501	NA	NA	NA	NA	NA	1p36.11	NA	NA	NA	NA	rs55663650	0.12	0.12	0.106	0.109625	0.164	0.1706	0.0965	0.0038	0.1431	0.17	0.15	0.11	0.01	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.582388	1.582388	NA	NA	NA	NA	0.181	NA	4.1693333
1235	5	134782414	134782414	G	T	exonic	C5orf20	NA	synonymous SNV	C5orf20:NM_130848:exon1:c.C385A:p.R129R	exonic	ENSG00000251380	NA	synonymous SNV	ENSG00000251380:ENST00000503143:exon1:c.C385A:p.R129R	NA	NA	5q31.1	NA	NA	NA	NA	rs12518053	0.62	0.62	0.639	0.651757	0.5149	0.5635	0.5548	0.9561	0.5409	0.5	0.55	0.51	0.95	0.5193	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.155684	NA	NA	0.463372	0.880163	NA	0.768	NA	4.1690946
1235	8	143694775	143694775	G	C	exonic	ARC	NA	synonymous SNV	ARC:NM_015193:exon1:c.C858G:p.R286R	exonic	ENSG00000198576	NA	synonymous SNV	ENSG00000198576:ENST00000356613:exon1:c.C858G:p.R286R	NA	NA	8q24.3	NA	NA	NA	NA	rs28686812	0.52	0.52	0.546	0.500599	0.508	0.3948	0.4928	0.5651	0.5204	0.52	0.4	0.56	0.61	0.5033	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.050398	NA	NA	0.486279	0.542215	NA	0.457	NA	4.1690876
1235	2	132384381	132384381	G	A	intergenic	RNU6-81P,C2orf27A	dist=23913;dist=95683	NA	NA	ncRNA_exonic	ENSG00000204434	NA	NA	NA	Score=884;Name=lod=5216	NA	2q21.1	NA	NA	NA	NA	rs12991373	0.39	0.39	0.379	0.391374	0.4155	0.3562	0.3746	0.3563	0.4622	0.41	0.4	0.41	0.33	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.063907	NA	NA	0.415462	0.363439	NA	0.203	NA	4.169038
1235	2	132384588	132384588	C	G	intergenic	RNU6-81P,C2orf27A	dist=24120;dist=95476	NA	NA	ncRNA_exonic	ENSG00000204434	NA	NA	NA	Score=884;Name=lod=5216	NA	2q21.1	NA	NA	NA	NA	rs13011674	0.39	0.39	0.328	0.390575	0.4155	0.3562	0.3746	0.3533	0.4622	0.41	0.4	0.41	0.33	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.298299	NA	NA	0.415462	0.362717	NA	0.014	NA	4.169038
1235	5	98016333	98016333	C	G	intergenic	RIOK2,RGMB	dist=1497328;dist=88666	NA	NA	ncRNA_exonic	ENSG00000251553	NA	NA	NA	Score=751;Name=lod=1506	NA	5q15	NA	NA	NA	NA	rs160710	0.76	0.76	0.747	0.708466	0.831	0.7192	0.8646	0.5764	0.6391	0.83	0.74	0.84	0.64	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.06903	NA	NA	NA	NA	NA	0.696	NA	4.169
1235	19	17186127	17186127	A	C	intronic	HAUS8	NA	NA	NA	intronic	ENSG00000131351	NA	NA	NA	NA	NA	19p13.11	NA	Name=Oct-2,POU2F2,TAF1,E2F6_(H-50),E2F6,YY1_(C-20),TCF4,Pol2,NRSF,NFKB,HEY1,ZBTB7A_(SC-34508),TBP,Nrf1,Pol2(b),KAP1,Pol2-4H8,HA-E2F1,YY1	NA	NA	rs2305752	0.44	0.44	0.398	0.489417	0.4036	0.4067	0.5245	0.5151	0.6033	0.39	0.42	0.49	0.52	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.051498	NA	NA	0.427718	0.510838	NA	0.514	NA	4.168682
1235	2	133014612	133014612	A	C	ncRNA_exonic	MIR663B	NA	NA	NA	ncRNA_exonic	ENSG00000221288	NA	NA	NA	NA	NA	2q21.2	NA	NA	NA	NA	rs74853538	NA	NA	0.311	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.498	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.201814	NA	NA	NA	NA	NA	0.109	NA	4.1686666
1235	5	178986987	178986987	C	T	UTR5	RUFY1	NM_001040451:c.-53C>T	NA	NA	UTR5	ENSG00000176783	ENST00000437570:c.-53C>T	NA	NA	NA	NA	5q35.3	NA	Name=TAF1,Pol2,ZNF263,c-Myc	NA	NA	rs12658664	0.49	0.49	0.499	0.496406	0.3519	0.7421	0.4769	0.4145	0.5164	0.35	0.75	0.48	0.43	0.4518	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.628263	1.628263	NA	0.361047	0.414889	NA	0.406	NA	4.1685864
1235	1	201772891	201772891	G	A	intronic	NAV1	NA	NA	NA	ncRNA_intronic	ENSG00000231871	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs41313906	0.03	0.03	0.023	0.0303514	0.0487	0.001	0.0533	0.0068	0.0573	0.05	NA	0.05	0.0041	0.0545	0.062	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.715778	NA	NA	0.061628	0.019301	NA	0.022	NA	4.1685053
1235	2	133014602	133014602	G	C	ncRNA_exonic	MIR663B	NA	NA	NA	ncRNA_exonic	ENSG00000221288	NA	NA	NA	NA	NA	2q21.2	NA	NA	NA	NA	rs75245503	NA	NA	0.298	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4982	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.068219	NA	NA	NA	NA	NA	0.109	NA	4.1684666
1235	7	88389420	88389420	A	G	intronic	ZNF804B	NA	NA	NA	intronic	ENSG00000182348	NA	NA	NA	NA	NA	7q21.13	NA	NA	Name=7	NA	rs1858848	0.37	0.37	0.378	0.408946	0.2813	0.3532	0.2867	0.6543	0.3528	0.25	0.33	0.3	0.66	0.2994	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.030147	NA	NA	0.25093	0.602587	ID=COSN168138;OCCURENCE=1(large_intestine)	0.42	NA	4.16837
1235	15	78207601	78207601	G	A	ncRNA_exonic	LOC645752	NA	NA	NA	ncRNA_exonic	ENSG00000260776	NA	NA	NA	NA	NA	15q24.3	NA	NA	NA	NA	rs28451071	0.2	0.2	0.21	0.153554	0.2584	0.0476	0.1225	0.1997	0.1145	0.3	0.06	0.15	0.24	0.2399	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.212902	NA	NA	NA	NA	NA	0.13	NA	4.1683666
1235	2	165349463	165349463	T	C	UTR3	GRB14	NM_004490:c.*83A>G	NA	NA	UTR3	ENSG00000115290	ENST00000263915:c.*83A>G,ENST00000543549:c.*83A>G	NA	NA	NA	NA	2q24.3	NA	NA	NA	NA	rs11765	0.13	0.13	0.119	0.139177	0.165	0.0129	0.2334	0.1573	0.1513	0.17	0.01	0.2	0.16	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.580119	NA	NA	NA	NA	NA	0.167	NA	4.1683334
1235	7	87151524	87151524	C	G	intronic	ABCB1	NA	NA	NA	ncRNA_exonic	ENSG00000231956	NA	NA	NA	NA	NA	7q21.12	NA	NA	NA	NA	rs1882477	0.36	0.36	0.364	0.377995	0.165	0.4365	0.2392	0.6596	0.2546	0.15	0.47	0.23	0.67	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.115473	NA	NA	NA	NA	NA	0.341	NA	4.1683333
1235	11	3713333	3713333	C	T	intronic	NUP98	NA	NA	NA	ncRNA_exonic	ENSG00000238686	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs111384916	0.11	0.11	0.084	0.091853	0.165	0.0258	0.1974	0.0356	0.0859	0.17	0.02	0.2	0.04	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.514808	NA	NA	NA	NA	NA	0.094	NA	4.1683333
1235	14	71061844	71061844	G	A	intronic	MED6	NA	NA	NA	ncRNA_exonic	ENSG00000258951	NA	NA	NA	NA	NA	14q24.2	NA	NA	NA	NA	rs7157685	0.34	0.34	0.358	0.352436	0.165	0.5258	0.183	0.556	0.2117	0.16	0.52	0.17	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.712939	NA	NA	NA	NA	NA	0.333	NA	4.1683333
1235	5	98016723	98016723	C	G	intergenic	RIOK2,RGMB	dist=1497718;dist=88276	NA	NA	ncRNA_exonic	ENSG00000251553	NA	NA	NA	Score=751;Name=lod=1506	NA	5q15	NA	NA	NA	NA	rs184143	0.76	0.76	0.74	0.709065	0.832	0.7192	0.8646	0.5779	0.6391	0.83	0.74	0.84	0.64	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.032997	NA	NA	NA	NA	NA	0.746	NA	4.168
1235	10	118509599	118509599	C	T	intergenic	HSPA12A,ENO4	dist=7514;dist=99424	NA	NA	ncRNA_exonic	ENSG00000228195	NA	NA	NA	Score=783;Name=lod=2024	NA	10q25.3	NA	NA	NA	NA	rs10787728	0.65	0.65	0.619	0.646765	0.832	0.6012	0.7392	0.3238	0.8742	0.85	0.58	0.75	0.35	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.332735	NA	NA	NA	NA	NA	0.565	NA	4.168
1235	22	22453513	22453513	C	T	intergenic	TOP3B,VPREB1	dist=116366;dist=145687	NA	NA	exonic	ENSG00000211638	NA	nonsynonymous SNV	ENSG00000211638:ENST00000390283:exon2:c.C259T:p.R87C	NA	NA	22q11.22	NA	NA	NA	NA	rs9611014	0.22	0.22	0.188	0.196286	0.2147	0.2946	0.3429	0.0106	0.2229	0.24	0.31	0.31	0.02	0.2362	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.049772	NA	NA	0.214508	0.053508	NA	0.101	NA	4.1679254
1235	15	41148199	41148199	C	T	exonic	SPINT1	NA	synonymous SNV	SPINT1:NM_001032367:exon8:c.C1227T:p.Y409Y,SPINT1:NM_003710:exon9:c.C1227T:p.Y409Y,SPINT1:NM_181642:exon9:c.C1275T:p.Y425Y	exonic	ENSG00000166145	NA	synonymous SNV	ENSG00000166145:ENST00000564375:exon5:c.C576T:p.Y192Y,ENSG00000166145:ENST00000568580:exon7:c.C1128T:p.Y376Y,ENSG00000166145:ENST00000431806:exon8:c.C1227T:p.Y409Y,ENSG00000166145:ENST00000344051:exon9:c.C1275T:p.Y425Y,ENSG00000166145:ENST00000562057:exon9:c.C1227T:p.Y409Y	NA	NA	15q15.1	Score=893;Name=V$RFX1_02	NA	NA	NA	rs659232	0.86	0.86	0.859	0.853834	0.829	0.9901	0.8905	0.7481	0.8558	0.82	0.99	0.89	0.76	0.852	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.225241	NA	NA	0.817791	0.767817	NA	0.862	NA	4.1678756
1235	2	43903354	43903354	T	C	exonic	LOC728819	NA	synonymous SNV	LOC728819:NM_001101330:exon1:c.A108G:p.Q36Q	ncRNA_exonic	ENSG00000223658	NA	NA	NA	NA	NA	2p21	NA	Name=SETDB1	NA	NA	rs4952675	0.51	0.51	0.495	0.502596	0.6859	0.1558	0.5115	0.5787	0.5624	0.68	0.17	0.57	0.59	0.6154	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.292165	NA	NA	0.697588	0.618744	ID=COSN166081;OCCURENCE=1(NS)	0.478	NA	4.1677786
1235	3	116746374	116746374	C	T	intergenic	LSAMP-AS3,IGSF11	dist=310487;dist=1873105	NA	NA	intronic	ENSG00000185565	NA	NA	NA	Score=694;Name=lod=882	NA	3q13.31	NA	NA	NA	NA	rs35725689	NA	NA	0.293	0.358227	0.499	0.2976	0.3314	0.3442	0.3139	NA	NA	NA	NA	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.232375	NA	NA	NA	NA	NA	0.341	NA	4.1676667
1235	1	43917409	43917409	T	C	UTR3	SZT2	NM_015284:c.*1258T>C	NA	NA	UTR3	ENSG00000198198	ENST00000562955:c.*1258T>C,ENST00000372442:c.*1258T>C	NA	NA	NA	NA	1p34.2	NA	NA	Name=7	NA	rs2251804	0.27	0.27	0.23	0.208067	0.4254	0.0754	0.3501	0.146	0.1043	0.43	0.07	0.38	0.17	0.3223	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.073056	NA	NA	0.418488	0.184521	NA	0.348	NA	4.1671454
1235	7	100553073	100553073	T	A	intergenic	ACHE,MUC12	dist=59532;dist=59831	NA	NA	intronic	ENSG00000169894	NA	NA	NA	NA	NA	7q22.1	NA	Name=CTCF	NA	NA	rs73714269	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4999	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.458309	NA	NA	NA	NA	NA	0.493	NA	4.1667667
1235	6	57512792	57512792	T	C	intronic	PRIM2	NA	NA	NA	UTR3	ENSG00000146143	ENST00000607273:c.*579T>C	NA	NA	NA	NA	6p11.2	NA	NA	NA	NA	rs372064495	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.72496	NA	NA	NA	NA	NA	NA	NA	4.1666667
1235	9	33385364	33385364	A	T	intronic	AQP7	NA	NA	NA	UTR3	ENSG00000165269	ENST00000537089:c.*252T>A,ENST00000379506:c.*252T>A,ENST00000539936:c.*252T>A	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs115119744	NA	NA	0.284	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.285971	NA	NA	NA	NA	NA	NA	NA	4.1666667
1235	9	135962502	135962502	T	C	downstream	CELP	NA	NA	NA	ncRNA_exonic	ENSG00000170827	NA	NA	NA	NA	NA	9q34.2	NA	NA	NA	NA	rs2975127	0.88	0.88	0.832	NA	NA	NA	NA	NA	NA	0.89	0.99	0.91	0.71	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.726371	1.726371	NA	NA	NA	NA	0.464	NA	4.1666666
1235	15	20874676	20874676	T	C	downstream	NBEAP1	NA	NA	NA	ncRNA_intronic	ENSG00000258590	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs28497407	NA	NA	0.511	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.224212	NA	NA	NA	NA	NA	0.464	NA	4.1666666
1235	15	21936464	21936464	C	T	ncRNA_exonic	LOC646214	NA	NA	NA	downstream	ENSG00000237161	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs8025772	NA	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.388336	1.388336	NA	NA	NA	NA	0.254	NA	4.1666666
1235	15	21938163	21938163	T	G	ncRNA_exonic	LOC646214	NA	NA	NA	upstream	ENSG00000237161	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs4247057	NA	NA	0.482	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.761267	NA	NA	NA	NA	NA	0.536	NA	4.1666666
1235	15	21938209	21938209	C	T	ncRNA_exonic	LOC646214	NA	NA	NA	upstream	ENSG00000237161	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs11248829	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.880081	NA	NA	NA	NA	NA	0.203	NA	4.1666666
1235	16	32164335	32164335	G	A	upstream	HERC2P4	NA	NA	NA	ncRNA_intronic	ENSG00000230267	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs460199	NA	NA	0.365	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.269595	NA	NA	NA	NA	NA	NA	NA	4.1666666
1235	X	153010665	153010665	G	A	downstream	ABCD1	NA	NA	NA	ncRNA_intronic	ENSG00000232725	NA	NA	NA	NA	NA	Xq28	NA	NA	NA	NA	rs72616453	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.269505	NA	NA	NA	NA	NA	0.022	NA	4.1666666
1235	X	153010680	153010680	G	C	downstream	ABCD1	NA	NA	NA	ncRNA_intronic	ENSG00000232725	NA	NA	NA	NA	NA	Xq28	NA	NA	NA	NA	rs72616454	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.991989	NA	NA	NA	NA	NA	0.022	NA	4.1666666
1235	6	57512565	57512565	T	C	exonic	PRIM2	NA	unknown	UNKNOWN	UTR3	ENSG00000146143	ENST00000607273:c.*352T>C	NA	NA	NA	NA	6p11.2	NA	NA	NA	NA	rs4294008	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5002	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.232856	NA	0.3	NA	NA	NA	0.493	NA	4.1664667
1235	3	47604086	47604086	T	C	UTR3	CSPG5	NM_001206943:c.*4A>G,NM_001206944:c.*114A>G,NM_001206942:c.*4A>G,NM_001206945:c.*4A>G,NM_006574:c.*4A>G	NA	NA	UTR3	ENSG00000114646	ENST00000264723:c.*4A>G,ENST00000383738:c.*4A>G,ENST00000456150:c.*4A>G	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs116232180	0.03	0.03	0.017	0.0173722	0.0626	NA	0.0274	0.003	0.001	0.07	NA	0.04	0.01	0.0427	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.340186	1.340186	NA	0.061744	0.013164	NA	0.116	NA	4.1662894
1235	17	51901084	51901084	A	G	exonic	KIF2B	NA	synonymous SNV	KIF2B:NM_032559:exon1:c.A690G:p.L230L	exonic	ENSG00000141200	NA	synonymous SNV	ENSG00000141200:ENST00000268919:exon1:c.A690G:p.L230L	Score=460;Name=lod=99	NA	17q22	NA	NA	NA	NA	rs3803825	0.81	0.81	0.812	0.762181	0.841	0.8145	0.7651	0.789	0.589	0.84	0.8	0.78	0.8	0.8062	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.597305	NA	NA	0.853256	0.800953	NA	0.797	NA	4.1662106
1235	10	86004873	86004873	T	C	exonic	RGR	NA	synonymous SNV	RGR:NM_001012720:exon1:c.T27C:p.T9T,RGR:NM_001012722:exon1:c.T27C:p.T9T,RGR:NM_002921:exon1:c.T27C:p.T9T	exonic	ENSG00000148604	NA	synonymous SNV	ENSG00000148604:ENST00000358110:exon1:c.T27C:p.T9T,ENSG00000148604:ENST00000359452:exon1:c.T27C:p.T9T,ENSG00000148604:ENST00000372092:exon1:c.T27C:p.T9T	NA	NA	10q23.1	NA	NA	NA	NA	rs2279227	0.6	0.6	0.608	0.633586	0.4911	0.495	0.5879	0.9773	0.4908	0.49	0.45	0.58	0.97	0.5312	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.257496	NA	NA	0.478256	0.89832	NA	0.652	NA	4.1661106
1235	13	111589204	111589204	G	C	intergenic	ANKRD10,ARHGEF7	dist=21788;dist=178420	NA	NA	ncRNA_exonic	ENSG00000227105	NA	NA	NA	Score=626;Name=lod=468	NA	13q34	NA	NA	NA	NA	rs9515317	0.83	0.83	0.814	0.810703	0.834	0.9256	0.8141	0.7231	0.7843	0.82	0.93	0.81	0.72	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.717155	NA	NA	NA	NA	NA	0.862	NA	4.166
1235	13	111589278	111589278	G	A	intergenic	ANKRD10,ARHGEF7	dist=21862;dist=178346	NA	NA	ncRNA_exonic	ENSG00000227105	NA	NA	NA	Score=626;Name=lod=468	NA	13q34	NA	NA	NA	NA	rs2391884	0.82	0.82	0.811	0.802117	0.834	0.9256	0.8127	0.6914	0.7843	0.82	0.93	0.81	0.69	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.765795	NA	NA	NA	NA	NA	0.855	NA	4.166
1235	13	111590930	111590930	C	T	intergenic	ANKRD10,ARHGEF7	dist=23514;dist=176694	NA	NA	ncRNA_exonic	ENSG00000227105	NA	NA	NA	Score=662;Name=lod=651	NA	13q34	NA	NA	NA	NA	rs7332577	0.82	0.82	0.813	0.801318	0.834	0.9256	0.8156	0.6861	0.7853	0.82	0.93	0.82	0.68	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.279925	NA	NA	NA	NA	NA	0.841	NA	4.166
1235	20	42815190	42815190	G	A	exonic	JPH2	NA	synonymous SNV	JPH2:NM_020433:exon1:c.C156T:p.Y52Y,JPH2:NM_175913:exon1:c.C156T:p.Y52Y	exonic	ENSG00000149596	NA	synonymous SNV	ENSG00000149596:ENST00000342272:exon1:c.C156T:p.Y52Y,ENSG00000149596:ENST00000372980:exon1:c.C156T:p.Y52Y	Score=700;Name=lod=933	NA	20q13.12	NA	NA	NA	NA	rs1883790	0.84	0.84	0.829	0.854233	0.827	0.745	0.8948	0.9607	0.8221	0.83	0.74	0.87	0.95	0.845	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.829541	NA	NA	0.829302	0.938493	NA	0.783	NA	4.1653646
1235	21	42824733	42824733	G	A	exonic	MX1	NA	synonymous SNV	MX1:NM_001178046:exon14:c.G1695A:p.Q565Q,MX1:NM_002462:exon16:c.G1695A:p.Q565Q,MX1:NM_001144925:exon18:c.G1695A:p.Q565Q	exonic	ENSG00000157601	NA	synonymous SNV	ENSG00000157601:ENST00000288383:exon12:c.G1626A:p.Q542Q,ENSG00000157601:ENST00000455164:exon14:c.G1695A:p.Q565Q,ENSG00000157601:ENST00000398598:exon16:c.G1695A:p.Q565Q,ENSG00000157601:ENST00000398600:exon18:c.G1695A:p.Q565Q	NA	NA	21q22.3	NA	NA	NA	NA	rs469304	0.27	0.27	0.259	0.266973	0.5348	0.006	0.3127	0.1641	0.3671	0.51	0.0017	0.34	0.16	0.42	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.412135	NA	NA	0.546512	0.218793	NA	0.319	NA	4.1653546
1235	3	86063365	86063365	G	A	intronic	CADM2	NA	NA	NA	ncRNA_exonic	ENSG00000243915	NA	NA	NA	NA	NA	3p12.1	NA	NA	NA	NA	rs9810010	0.24	0.24	0.236	0.267971	0.168	0.3046	0.1988	0.3321	0.2955	0.16	0.32	0.2	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.78979	NA	NA	NA	NA	NA	0.246	NA	4.1653333
1235	19	19381728	19381728	G	C	intronic	TM6SF2	NA	NA	NA	ncRNA_intronic	ENSG00000267629	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs2074302	0.16	0.16	0.179	0.161741	0.168	0.0198	0.1282	0.2995	0.1391	0.15	0.02	0.14	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.62927	NA	NA	NA	NA	NA	0.246	NA	4.1653333
1235	1	67744500	67744500	C	G	intergenic	IL23R,IL12RB2	dist=18850;dist=28547	NA	NA	downstream	ENSG00000228523	NA	NA	NA	Score=632;Name=lod=494	NA	1p31.3	NA	NA	NA	NA	rs11209033	0.33	0.33	0.315	0.355631	0.335	0.501	0.2305	0.2027	0.5225	0.34	0.46	0.24	0.22	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.75354	NA	NA	NA	NA	NA	0.304	NA	4.165
1235	1	151400942	151400942	A	C	intronic	POGZ	NA	NA	NA	intronic	ENSG00000143442	NA	NA	NA	NA	NA	1q21.3	Score=909;Name=V$TATA_C	NA	NA	NA	rs11204811	0.51	0.51	0.507	0.503195	0.835	0.2113	0.4683	0.3729	0.6636	0.84	0.18	0.52	0.36	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.236146	NA	NA	NA	NA	NA	0.601	NA	4.165
1236	1	157489516	157489516	T	G	intronic	FCRL5	NA	NA	NA	intronic	ENSG00000143297	NA	NA	NA	NA	NA	1q23.1	NA	NA	Name=5	NA	rs1332714	0.16	0.16	0.149	0.161342	0.2744	0.1181	0.1787	0.0159	0.274	0.29	0.09	0.22	0.02	0.2624	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.710608	NA	NA	0.298256	0.057876	NA	0.167	NA	4.164944
1236	7	131191536	131191536	A	G	intronic	PODXL	NA	NA	NA	intronic	ENSG00000128567	NA	NA	NA	NA	NA	7q32.3	NA	Name=CTCF,CTCF_(SC-5916),Pol2-4H8	Name=9	NA	rs3212303	0.58	0.58	0.542	0.572284	0.6412	0.4921	0.621	0.4796	0.6748	0.63	0.51	0.7	0.5	0.5945	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.390343	NA	NA	0.599535	0.470949	NA	0.464	NA	4.164765
1236	6	97613163	97613163	T	C	exonic	MMS22L	NA	synonymous SNV	MMS22L:NM_198468:exon21:c.A3180G:p.P1060P	exonic	ENSG00000146263	NA	synonymous SNV	ENSG00000146263:ENST00000369251:exon19:c.A3060G:p.P1020P,ENSG00000146263:ENST00000275053:exon21:c.A3180G:p.P1060P	NA	NA	6q16.1	NA	NA	NA	NA	rs1209290	0.45	0.45	0.467	0.510783	0.497	0.246	0.4078	0.7209	0.5869	0.49	0.22	0.41	0.71	0.4923	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.297563	NA	NA	0.512791	0.677031	NA	0.558	NA	4.1645756
1236	15	52486306	52486306	C	T	intronic	MYO5C	NA	NA	NA	ncRNA_intronic	ENSG00000259577	NA	NA	NA	NA	NA	15q21.2	NA	NA	NA	NA	rs11855672	0.14	0.14	0.122	0.151158	0.169	0.0883	0.2839	0.093	0.182	0.16	0.08	0.27	0.1	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.776793	NA	NA	NA	NA	NA	0.181	NA	4.1643333
1236	5	98016834	98016834	A	G	intergenic	RIOK2,RGMB	dist=1497829;dist=88165	NA	NA	ncRNA_exonic	ENSG00000251553	NA	NA	NA	Score=751;Name=lod=1506	NA	5q15	NA	NA	NA	NA	rs160714	0.82	0.82	0.8	0.778554	0.836	0.7847	0.8746	0.7542	0.6779	0.83	0.8	0.86	0.78	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.108998	NA	NA	NA	NA	NA	0.848	NA	4.164
1236	17	14608855	14608855	A	G	intergenic	HS3ST3B1,CDRT7	dist=359363;dist=325437	NA	NA	upstream	ENSG00000230897	NA	NA	NA	Score=727;Name=lod=1199	NA	17p12	NA	NA	NA	NA	rs4791597	0.37	0.37	0.328	0.407348	0.336	0.121	0.4856	0.7315	0.2822	0.33	0.1	0.41	0.69	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.257533	NA	NA	NA	NA	NA	0.377	NA	4.164
1236	6	29141772	29141772	A	G	exonic	OR2J2	NA	synonymous SNV	OR2J2:NM_030905:exon1:c.A360G:p.S120S	exonic	ENSG00000204700	NA	synonymous SNV	ENSG00000204700:ENST00000377167:exon1:c.A360G:p.S120S	Score=454;Name=lod=93	NA	6p22.1	NA	NA	NA	NA	rs3129158	0.75	0.75	0.759	0.749201	0.832	0.5942	0.7493	0.7685	0.7975	0.86	0.57	0.74	0.8	0.819	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.066355	NA	NA	0.851693	0.802018	NA	0.79	NA	4.1639736
1236	14	24572495	24572495	G	C	intronic	PCK2	NA	NA	NA	intronic	ENSG00000100889,ENSG00000129535	NA	NA	NA	NA	NA	14q11.2	NA	Name=Pol2	NA	NA	rs2071586	0.44	0.44	0.472	0.491014	0.2565	0.6349	0.2795	0.6944	0.4591	0.26	0.61	0.28	0.65	0.3467	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.630144	NA	NA	0.23314	0.599183	NA	0.283	NA	4.16366
1236	1	206666734	206666734	T	G	intronic	IKBKE	NA	NA	NA	intronic	ENSG00000143466,ENSG00000162888	NA	NA	NA	NA	NA	1q32.1	NA	NA	Name=2	NA	rs12026566	0.29	0.29	0.25	0.293131	0.2763	0.244	0.3487	0.3782	0.2065	0.27	0.23	0.39	0.33	0.2764	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.098364	2.098364	NA	0.283721	0.344984	NA	0.268	NA	4.163579
1236	7	149515754	149515754	A	G	exonic	SSPO	NA	synonymous SNV	SSPO:NM_198455:exon83:c.A11655G:p.P3885P	ncRNA_exonic	ENSG00000197558	NA	NA	NA	NA	NA	7q36.1	NA	NA	NA	NA	rs740113	0.46	0.46	0.468	0.490615	0.3042	0.4187	0.3919	0.8585	0.3292	0.29	0.42	0.4	0.84	0.3742	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.041053	NA	NA	0.324782	0.743408	NA	0.5	NA	4.1634846
1236	19	48304907	48304907	C	T	UTR3	TPRX1	NM_198479:c.*125G>A	NA	NA	UTR3	ENSG00000178928	ENST00000535759:c.*125G>A,ENST00000322175:c.*125G>A,ENST00000543508:c.*125G>A	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs111411093	0.08	0.08	0.073	0.0670927	0.17	0.0139	0.0749	0.0023	0.0982	0.17	0.01	0.08	0.0041	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.427546	NA	NA	NA	NA	NA	0.036	NA	4.1633334
1236	10	134910629	134910629	G	A	intronic	GPR123	NA	NA	NA	intronic	ENSG00000197177	NA	NA	NA	NA	NA	10q26.3	NA	Name=Rad21,CTCF,CTCF_(SC-5916)	NA	NA	rs11101914	0.37	0.37	0.367	0.381589	0.2674	0.5893	0.3357	0.2466	0.5	0.28	0.65	0.31	0.24	0.3216	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.248576	NA	NA	0.247674	0.241716	NA	0.355	NA	4.163326
1236	3	87101747	87101747	G	A	intergenic	VGLL3,MIR4795	dist=61490;dist=173592	NA	NA	ncRNA_exonic	ENSG00000241293	NA	NA	NA	Score=568;Name=lod=271	NA	3p12.1	NA	NA	NA	NA	rs2660745	0.73	0.73	0.713	0.707268	0.837	0.7024	0.8271	0.5038	0.7689	0.85	0.7	0.81	0.5	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.538473	NA	NA	NA	NA	NA	0.739	NA	4.163
1236	16	71792696	71792696	C	A	intronic	AP1G1	NA	NA	NA	intronic	ENSG00000166747	NA	NA	NA	NA	NA	16q22.2	NA	Name=USF-1,FOXA2_(SC-6554),FOXA1_(SC-101058)	NA	NA	rs12919271	0.18	0.18	0.166	0.14976	0.3022	0.0407	0.1671	0.093	0.1697	0.32	0.05	0.21	0.11	0.2326	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.0802	NA	NA	0.30228	0.116523	NA	0.21	NA	4.16292
1236	17	73228099	73228099	A	G	intronic	NUP85	NA	NA	NA	UTR3	ENSG00000125450	ENST00000578830:c.*405A>G	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs114092578	0.01	0.01	0.012	0.0133786	NA	NA	0.0029	0.0492	NA	0.0013	NA	NA	0.05	0.0035	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.211654	NA	NA	0.000465	0.040172	NA	NA	NA	4.1627017
1236	11	6815836	6815836	T	A	UTR3	OR6A2	NM_003696:c.*120A>T	NA	NA	UTR3	ENSG00000184933	ENST00000332601:c.*120A>T	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs521312	0.14	0.14	0.144	0.150559	0.171	0.1796	0.098	0.0643	0.2536	0.17	0.17	0.11	0.07	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.023424	NA	NA	NA	NA	NA	0.072	NA	4.1623334
1236	1	152185500	152185500	C	G	UTR3	HRNR	NM_001009931:c.*52G>C	NA	NA	ncRNA_UTR3	ENSG00000197915	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs12726613	0.34	0.34	0.326	0.377396	0.17	0.619	0.4265	0.2428	0.4888	0.18	0.63	0.35	0.26	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.276044	NA	NA	0.167924	0.248284	NA	0.246	NA	4.162076
1236	17	46868710	46868710	C	T	intronic	TTLL6	NA	NA	NA	intronic	ENSG00000170703	NA	NA	NA	NA	NA	17q21.32	NA	Name=PU.1,CTCF,KAP1,AP-2gamma	NA	NA	rs3887854	0.28	0.28	0.255	0.273562	0.2714	0.1895	0.4006	0.354	0.1636	0.27	0.18	0.39	0.34	0.2915	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.140995	NA	NA	0.275116	0.340445	NA	0.333	NA	4.161984
1236	11	113283459	113283459	G	A	exonic	DRD2	NA	synonymous SNV	DRD2:NM_016574:exon6:c.C870T:p.P290P,DRD2:NM_000795:exon7:c.C957T:p.P319P	exonic	ENSG00000149295	NA	synonymous SNV	ENSG00000149295:ENST00000346454:exon6:c.C870T:p.P290P,ENSG00000149295:ENST00000542968:exon6:c.C957T:p.P319P,ENSG00000149295:ENST00000544518:exon6:c.C954T:p.P318P,ENSG00000149295:ENST00000362072:exon7:c.C957T:p.P319P,ENSG00000149295:ENST00000538967:exon7:c.C963T:p.P321P,ENSG00000149295:ENST00000355319:exon8:c.C963T:p.P321P	NA	NA	11q23.2	NA	NA	NA	NA	rs6277	0.27	0.27	0.252	0.24401	0.5437	0.0625	0.3256	0.0552	0.32	0.54	0.06	0.37	0.04	0.4158	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.23624	NA	NA	0.545275	0.142662	NA	0.203	NA	4.1618916
1236	7	147869670	147869670	T	C	ncRNA_intronic	MIR548T	NA	NA	NA	intronic	ENSG00000174469	NA	NA	NA	NA	NA	7q35	NA	NA	NA	NA	rs2074711	0.29	0.29	0.248	0.320887	0.172	0.5188	0.3487	0.202	0.411	0.17	0.49	0.31	0.21	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.208583	3.208583	NA	NA	NA	NA	0.188	NA	4.1613333
1236	3	183211906	183211906	A	G	exonic	KLHL6	NA	synonymous SNV	KLHL6:NM_130446:exon5:c.T1311C:p.N437N	exonic	ENSG00000172578	NA	synonymous SNV	ENSG00000172578:ENST00000341319:exon5:c.T1311C:p.N437N,ENSG00000172578:ENST00000468734:exon5:c.T1278C:p.N426N	NA	NA	3q27.1	NA	NA	NA	NA	rs1520101	0.67	0.67	0.694	0.697883	0.4771	0.8006	0.5793	0.8722	0.6677	0.47	0.81	0.62	0.84	0.561	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.177883	NA	NA	0.467558	0.803223	NA	0.681	NA	4.1610086
1236	19	1030956	1030956	G	C	intronic	CNN2	NA	NA	NA	intronic	ENSG00000064666	NA	NA	NA	NA	NA	19p13.3	NA	Name=Pol2,TAL1_(SC-12984),HA-E2F1,Egr-1	NA	NA	rs7256075	0.89	0.89	0.904	0.888578	0.839	0.998	0.7795	0.879	0.9172	0.85	1	0.83	0.87	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.081905	NA	NA	NA	NA	NA	0.841	NA	4.161
1236	3	128292213	128292213	A	G	exonic	C3orf27	NA	synonymous SNV	C3orf27:NM_007354:exon3:c.T360C:p.S120S	exonic	ENSG00000198685	NA	synonymous SNV	ENSG00000198685:ENST00000356020:exon3:c.T360C:p.S120S	NA	NA	3q21.3	NA	NA	Name=6	NA	rs2734046	0.83	0.83	0.845	0.828874	0.838	0.6825	0.8141	0.9856	0.7689	0.85	0.7	0.82	0.97	0.8241	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.04204	NA	NA	0.843721	0.963686	NA	0.906	NA	4.1608456
1236	13	24890050	24890050	G	A	intronic	C1QTNF9	NA	NA	NA	ncRNA_exonic	ENSG00000240868	NA	NA	NA	NA	NA	13q12.12	NA	NA	NA	NA	rs114252282	0.11	0.11	0.082	0.0994409	0.173	NA	0.1124	0.1505	0.0481	0.17	NA	0.12	0.13	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.151837	NA	NA	NA	NA	NA	0.072	NA	4.1603333
1236	15	79852757	79852757	A	G	intergenic	KIAA1024,MTHFS	dist=88115;dist=283132	NA	NA	upstream	ENSG00000259493	NA	NA	NA	Score=794;Name=lod=2243	NA	15q25.1	NA	NA	NA	NA	rs1685165	0.41	0.41	0.432	0.459265	0.34	0.3264	0.5317	0.5303	0.5716	0.34	0.33	0.48	0.57	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.207089	NA	NA	NA	NA	NA	0.399	NA	4.16
1236	16	281299	281299	G	A	intergenic	LUC7L,ITFG3	dist=1850;dist=3502	NA	NA	ncRNA_exonic	ENSG00000206168	NA	NA	NA	Score=304;Name=lod=23	NA	16p13.3	NA	NA	NA	NA	rs3760047	0.8	0.8	0.778	0.777356	0.84	0.8343	0.7911	0.7262	0.7137	0.83	0.82	0.77	0.74	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.709846	NA	NA	NA	NA	NA	0.79	NA	4.16
1236	16	16256767	16256767	T	G	intronic	ABCC6	NA	NA	NA	intronic	ENSG00000091262	NA	NA	NA	NA	Name=IgG glycosylation	16p13.11	NA	NA	NA	NA	rs3213473	0.74	0.74	0.688	0.726238	0.84	0.875	0.7911	0.3449	0.9254	0.84	0.88	0.79	0.36	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.284003	NA	NA	NA	NA	NA	0.717	NA	4.16
1236	7	87151658	87151658	C	T	intronic	ABCB1	NA	NA	NA	ncRNA_exonic	ENSG00000231956	NA	NA	NA	NA	NA	7q21.12	NA	NA	NA	NA	rs2373589	0.32	0.32	0.317	0.309305	0.174	0.4583	0.2205	0.4054	0.228	0.16	0.48	0.22	0.43	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.505428	NA	NA	NA	NA	NA	0.29	NA	4.1593333
1236	2	152382454	152382454	C	G	intronic	NEB	NA	NA	NA	intronic	ENSG00000183091	NA	NA	NA	NA	NA	2q23.3	NA	NA	Name=3	NA	rs6721666	0.61	0.61	0.583	0.545727	0.6233	0.5694	0.67	0.5068	0.4059	0.61	0.62	0.68	0.55	0.5943	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.213941	NA	NA	0.623244	0.536991	NA	0.565	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000081122.1;CLNDSDB=.;CLNDSDBID=.	4.159156
1236	13	44545226	44545226	C	A	intergenic	LACC1,LINC00284	dist=77158;dist=51245	NA	NA	ncRNA_exonic	ENSG00000179611	NA	NA	NA	Score=643;Name=lod=546	NA	13q14.11	NA	NA	NA	NA	rs3794438	0.76	0.76	0.723	0.716653	0.841	0.8532	0.8357	0.4312	0.7495	0.84	0.86	0.82	0.48	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.593481	NA	NA	NA	NA	NA	0.725	NA	4.159
1236	3	159976271	159976271	C	T	UTR3	IFT80	NM_001190241:c.*42G>A,NM_001190242:c.*42G>A,NM_020800:c.*42G>A	NA	NA	UTR3	ENSG00000068885,ENSG00000248710	ENST00000326448:c.*42G>A,ENST00000483465:c.*42G>A,ENST00000496589:c.*42G>A;ENST00000483754:c.*42G>A	NA	NA	NA	NA	3q25.33	NA	NA	NA	NA	rs16831149	0.15	0.15	0.175	0.169928	0.0507	0.0288	0.0836	0.5257	0.0184	0.05	0.02	0.08	0.52	0.075	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.508056	NA	NA	0.048732	0.414396	NA	0.145	NA	4.1589014
1236	17	10409277	10409277	G	A	intronic	MYH1	NA	NA	NA	ncRNA_intronic	ENSG00000214970	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs114149575	0.03	0.03	0.038	0.0371406	0.0497	0.001	0.0331	0.0545	0.0409	0.05	0.0017	0.03	0.04	0.0551	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.669153	NA	NA	0.069884	0.051294	NA	0.014	NA	4.1586493
1236	2	26679394	26679394	G	A	UTR3	DRC1	NM_145038:c.*9G>A	NA	NA	UTR3	ENSG00000157856	ENST00000288710:c.*9G>A	NA	NA	NA	NA	2p23.3	NA	NA	NA	NA	rs1054737	0.03	0.03	0.029	0.0265575	0.0606	NA	0.0288	0.0204	0.0256	0.06	NA	0.03	0.01	0.0446	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.854586	1.854586	NA	0.069651	0.034725	NA	0.109	NA	4.1584824
1236	6	32164874	32164874	C	A	intronic	NOTCH4	NA	NA	NA	intronic	ENSG00000204301	NA	NA	NA	NA	NA	6p21.32	NA	Name=GATA-1	NA	NA	rs2071279	0.22	0.22	0.205	0.208067	0.2833	0.1667	0.255	0.112	0.2699	0.27	0.19	0.28	0.12	0.2839	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.146529	NA	NA	0.274456	0.132694	NA	0.297	NA	4.158344
1236	11	9450377	9450377	T	G	ncRNA_exonic	SNORA23	NA	NA	NA	ncRNA_exonic	ENSG00000201998	NA	NA	NA	Score=489;Name=lod=130	NA	11p15.4	NA	NA	NA	NA	rs2290423	0.46	0.46	0.439	0.452676	0.5229	0.2927	0.5173	0.525	0.4018	0.5	0.3	0.52	0.53	0.4749	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.7825	2.7825	NA	0.510826	0.506865	NA	0.558	NA	4.1580406
1236	1	237951482	237951482	G	A	intronic	RYR2	NA	NA	NA	intronic	ENSG00000198626	NA	NA	NA	NA	NA	1q43	NA	Name=MafK_(ab50322)	NA	NA	rs16835818	0.3	0.3	0.319	0.297923	0.2773	0.1171	0.1974	0.5772	0.1994	0.28	0.12	0.21	0.6	0.2788	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.523876	NA	NA	0.286093	0.505673	NA	0.312	NA	4.157807
1236	12	9316907	9316907	C	T	intronic	PZP	NA	NA	NA	intronic	ENSG00000126838	NA	NA	NA	NA	NA	12p13.31	NA	NA	Name=12	NA	rs1863839	0.39	0.39	0.396	NA	NA	NA	NA	NA	NA	0.38	0.42	0.38	0.37	0.41	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.19288	NA	NA	0.432222	0.420497	NA	0.377	NA	4.157778
1236	3	12198485	12198485	A	T	intronic	SYN2,TIMP4	NA	NA	NA	ncRNA_intronic	ENSG00000157152	NA	NA	NA	NA	NA	3p25.2	NA	NA	NA	NA	rs10433537	0.04	0.04	0.038	0.0347444	0.0547	0.0248	0.0303	0.0166	0.0521	0.06	0.03	0.04	0.02	0.0551	0.066	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.422736	NA	NA	0.066062	0.030186	NA	0.058	NA	4.1574713
1236	22	45258539	45258539	G	A	UTR3	ARHGAP8,PRR5-ARHGAP8	NM_181335:c.*64G>A,NM_001017526:c.*64G>A,NM_001198726:c.*344G>A;NM_181334:c.*64G>A	NA	NA	UTR3	ENSG00000241484,ENSG00000248405	ENST00000517296:c.*64G>A,ENST00000389773:c.*64G>A,ENST00000389774:c.*64G>A,ENST00000336963:c.*344G>A,ENST00000356099:c.*64G>A,ENST00000389772:c.*1191G>A;ENST00000361473:c.*64G>A,ENST00000352766:c.*64G>A,ENST00000515632:c.*64G>A	NA	NA	NA	NA	22q13.31	NA	NA	NA	NA	rs2071763	0.21	0.21	0.194	0.223043	0.1759	0.3145	0.2493	0.09	0.3384	0.17	0.35	0.26	0.09	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.182182	NA	NA	NA	NA	NA	0.116	NA	4.1574334
1236	4	4304337	4304337	C	T	exonic	ZBTB49	NA	synonymous SNV	ZBTB49:NM_145291:exon3:c.C774T:p.A258A	exonic	ENSG00000168826	NA	synonymous SNV	ENSG00000168826:ENST00000337872:exon3:c.C774T:p.A258A,ENSG00000168826:ENST00000355834:exon3:c.C774T:p.A258A,ENSG00000168826:ENST00000515012:exon3:c.C774T:p.A258A	NA	NA	4p16.3	NA	NA	Name=9	NA	rs2916382	0.82	0.82	0.8	0.799521	0.8489	0.7629	0.8761	0.7602	0.7853	0.85	0.76	0.86	0.8	0.8263	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.652471	NA	NA	0.83407	0.788697	NA	0.819	NA	4.1573966
1236	8	108185425	108185425	C	T	intergenic	ABRA,ANGPT1	dist=402953;dist=76285	NA	NA	downstream	ENSG00000254146	NA	NA	NA	Score=741;Name=lod=1370	NA	8q23.1	NA	NA	NA	NA	rs7829806	0.48	0.48	0.464	0.488419	0.3429	0.5615	0.4207	0.5885	0.4755	0.36	0.59	0.43	0.57	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.438219	NA	NA	NA	NA	NA	0.486	NA	4.1571
1236	6	38906072	38906072	A	G	ncRNA_intronic	LOC100131047	NA	NA	NA	ncRNA_intronic	ENSG00000231150	NA	NA	NA	NA	NA	6p21.2	NA	NA	NA	NA	rs2073037	0.41	0.41	0.389	0.396965	0.5099	0.3363	0.4337	0.3064	0.4397	0.5	0.33	0.47	0.32	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.376421	2.376421	NA	NA	NA	NA	0.399	NA	4.1567666
1236	14	70714027	70714027	A	T	ncRNA_exonic	ADAM21P1	NA	NA	NA	ncRNA_exonic	ENSG00000235812	NA	NA	NA	NA	NA	14q24.2	NA	NA	NA	NA	rs28562608	0.28	0.28	0.146	0.366414	0.5099	0.1647	0.5216	0.2617	0.4581	0.37	0.14	0.44	0.2	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.534689	NA	NA	NA	NA	NA	NA	NA	4.1567666
1236	5	80382806	80382806	G	T	intronic	RASGRF2	NA	NA	NA	intronic	ENSG00000113319	NA	NA	NA	NA	NA	5q14.1	NA	Name=USF-1	NA	NA	rs7733625	0.26	0.26	0.235	0.254193	0.2883	0.2698	0.3213	0.1967	0.2331	0.28	0.25	0.33	0.19	0.2668	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.529748	NA	NA	0.28814	0.200409	NA	0.246	NA	4.15676
1236	1	94549029	94549029	A	G	intronic	ABCA4	NA	NA	NA	intronic	ENSG00000198691	NA	NA	NA	NA	NA	1p22.1	NA	NA	NA	NA	rs526016	0.23	0.23	0.217	0.197684	0.2903	0.2292	0.2824	0.0885	0.1575	0.29	0.21	0.28	0.11	0.2461	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.71916	1.71916	NA	0.30712	0.123122	NA	0.246	CLINSIG=untested;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000085868.1;CLNDSDB=.;CLNDSDBID=.	4.15648
1236	1	6257826	6257826	T	C	intronic	RPL22	NA	NA	NA	intronic	ENSG00000116251	NA	NA	NA	Score=594;Name=lod=347	NA	1p36.31	NA	NA	NA	NA	rs2294714	0.38	0.38	0.36	0.360224	0.2773	0.4554	0.3343	0.441	0.2566	0.28	0.47	0.34	0.45	0.3163	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.939472	NA	NA	0.250116	0.427372	NA	0.333	NA	4.156284
1236	2	132796480	132796480	G	A	intergenic	C2orf27B,ANKRD30BL	dist=237246;dist=108684	NA	NA	upstream	ENSG00000226886	NA	NA	NA	NA	NA	2q21.2	NA	NA	Name=9	NA	rs58905578	0.42	0.42	0.362	0.432708	0.3439	0.5754	0.5245	0.292	0.502	0.34	0.56	0.48	0.32	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.853724	NA	NA	NA	NA	NA	NA	NA	4.1561
1236	3	87100988	87100988	T	C	intergenic	VGLL3,MIR4795	dist=60731;dist=174351	NA	NA	ncRNA_exonic	ENSG00000241293	NA	NA	NA	Score=737;Name=lod=1320	NA	3p12.1	NA	NA	NA	NA	rs2256479	0.69	0.69	0.661	0.671526	0.8439	0.6766	0.8112	0.3911	0.7689	0.86	0.67	0.8	0.37	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.061586	NA	NA	NA	NA	NA	0.674	NA	4.1561
1236	17	16725570	16725570	G	A	intergenic	USP32P1,KRT16P2	dist=17751;dist=8227	NA	NA	ncRNA_exonic	ENSG00000226145	NA	NA	NA	Score=399;Name=lod=56	NA	17p11.2	NA	NA	NA	NA	rs2621711	0.85	0.85	0.92	0.933107	0.8439	0.999	0.9092	0.9501	0.9509	0.82	0.86	0.86	0.85	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.050974	NA	NA	NA	NA	NA	0.42	NA	4.1561
1236	11	64000410	64000410	C	G	intronic	DNAJC4	NA	NA	NA	ncRNA_intronic	ENSG00000256116	NA	NA	NA	NA	NA	11q13.1	NA	NA	NA	NA	rs1058735	0.17	0.17	0.146	0.15615	0.1779	0.1875	0.3184	0.0915	0.0736	0.18	0.18	0.28	0.08	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.500633	NA	NA	NA	NA	NA	0.116	NA	4.1554333
1236	15	89195526	89195526	A	G	exonic	ISG20	NA	synonymous SNV	ISG20:NM_002201:exon3:c.A414G:p.L138L	exonic	ENSG00000172183	NA	synonymous SNV	ENSG00000172183:ENST00000306072:exon3:c.A414G:p.L138L,ENSG00000172183:ENST00000559876:exon3:c.A354G:p.L118L,ENSG00000172183:ENST00000560741:exon3:c.A414G:p.L138L	NA	NA	15q26.1	NA	Name=ZNF263	NA	NA	rs1137166	0.79	0.79	0.82	0.795327	0.831	0.7341	0.7522	0.77	0.8865	0.81	0.78	0.76	0.8	0.8239	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.06674	NA	NA	0.856362	0.767045	ID=COSM1129072;OCCURENCE=1(prostate)	0.797	NA	4.1554046
1236	17	16724049	16724049	C	T	intergenic	USP32P1,KRT16P2	dist=16230;dist=9748	NA	NA	ncRNA_exonic	ENSG00000226145	NA	NA	NA	Score=389;Name=lod=51	NA	17p11.2	NA	NA	NA	NA	rs2688020	0.9	0.9	0.928	0.932708	0.8449	1	0.9092	0.9455	0.953	0.85	0.99	0.91	0.87	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.01884	NA	NA	NA	NA	NA	0.862	NA	4.1551
1236	19	53714867	53714867	C	G	intergenic	ZNF665,ZNF818P	dist=18248;dist=1334	NA	NA	downstream	ENSG00000269051	NA	NA	NA	NA	NA	19q13.42	NA	Name=ZNF274	NA	NA	rs4801970	0.43	0.43	0.431	0.440495	0.3449	0.7312	0.379	0.2322	0.5644	0.33	0.72	0.38	0.3	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.421484	NA	NA	NA	NA	NA	0.399	NA	4.1551
1237	10	97605057	97605057	C	G	ncRNA_intronic	ENTPD1-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000226688,ENSG00000240527	NA	NA	NA	NA	NA	10q24.1	NA	NA	NA	NA	rs7074403	0.48	0.48	0.476	0.500599	0.5119	0.251	0.6527	0.5295	0.5992	0.52	0.26	0.64	0.57	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.560826	NA	NA	NA	NA	ID=COSN163719;OCCURENCE=1(breast)	0.543	NA	4.1547666
1237	6	30080036	30080036	G	A	intronic	TRIM31	NA	NA	NA	ncRNA_intronic	ENSG00000231226	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs3734837	0.17	0.17	0.166	0.170527	0.1789	0.3512	0.098	0.0113	0.2423	0.18	0.33	0.12	0.02	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.978546	NA	NA	NA	NA	NA	0.261	NA	4.1544333
1237	11	9830595	9830595	G	A	ncRNA_exonic	SBF2-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000246273	NA	NA	NA	NA	NA	11p15.4	NA	NA	Name=64	NA	rs11042500	0.3	0.3	0.287	0.254792	0.5368	0.006	0.3055	0.1846	0.2802	0.55	0.01	0.34	0.23	0.4274	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.604988	NA	NA	0.548323	0.256701	NA	0.37	NA	4.1541436
1237	22	30736911	30736911	G	A	intronic	SF3A1	NA	NA	NA	intronic	ENSG00000099995	NA	NA	NA	NA	NA	22q12.2	NA	NA	Name=5	NA	rs5749066	0.9	0.9	0.911	0.910543	0.8459	0.9157	0.8573	0.9879	0.9049	0.85	0.91	0.87	0.98	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.585796	NA	NA	NA	NA	NA	0.949	NA	4.1541
1237	12	114832510	114832510	C	A	intronic	TBX5	NA	NA	NA	intronic	ENSG00000089225	NA	NA	NA	NA	NA	12q24.21	NA	NA	Name=8	NA	rs2236017	0.51	0.51	0.495	0.528754	0.6054	0.3502	0.7032	0.3933	0.6933	0.6	0.37	0.68	0.4	0.6101	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.166775	NA	NA	0.630698	0.427826	NA	0.514	CLINSIG=unknown;CLNDBN=not_provided;CLNREVSTAT=single;CLNACC=RCV000128533.1;CLNDSDB=.;CLNDSDBID=.	4.153802
1237	9	95766471	95766471	A	T	intronic	FGD3	NA	NA	NA	intronic	ENSG00000127084	NA	NA	NA	NA	NA	9q22.31	NA	Name=CTCF,Pol2	Name=3	NA	rs6479445	0.69	0.69	0.708	0.707867	0.6054	0.5615	0.647	0.9448	0.6871	0.6	0.59	0.68	0.95	0.6308	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.466138	NA	NA	0.610013	0.905744	NA	0.739	NA	4.153787
1237	12	52661196	52661196	G	A	intergenic	KRT7,KRT81	dist=18487;dist=18501	NA	NA	intronic	ENSG00000170442	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs2077346	0.17	0.17	0.17	0.188099	0.2704	0.0962	0.1787	0.1248	0.2904	0.26	0.09	0.19	0.12	0.2428	0.26	0.18	T	.	.	.	.	.	.	.	.	.	.	.	.	-1.023	T	0.000	T	.	-1.14	0.11	-0.137	0.063	-0.013	7.278	-1.140066	NA	NA	NA	NA	NA	0.167	NA	4.1534667
1237	13	75814344	75814344	C	A	ncRNA_exonic	CTAGE11P	NA	NA	NA	ncRNA_exonic	ENSG00000214249	NA	NA	NA	NA	NA	13q22.2	NA	NA	NA	NA	rs61960514	0.16	0.16	0.141	0.124401	0.2982	0.0546	0.1916	0.0318	0.0951	0.28	0.06	0.21	0.04	0.2156	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.011337	NA	NA	NA	NA	NA	0.254	NA	4.1528666
1237	5	148620451	148620451	C	T	intronic	ABLIM3	NA	NA	NA	ncRNA_intronic	ENSG00000248647,ENSG00000253406	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs45498700	0.14	0.14	0.127	0.128195	0.1809	0.0704	0.3343	0.0061	0.1524	0.17	0.08	0.33	0.01	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.8561	NA	NA	NA	NA	NA	0.138	NA	4.1524333
1237	17	47243622	47243622	G	T	intronic	B4GALNT2	NA	NA	NA	intronic	ENSG00000167080	NA	NA	NA	Score=459;Name=lod=98	NA	17q21.32	NA	NA	NA	NA	rs16970025	0.26	0.26	0.255	0.26857	0.2773	0.1498	0.2839	0.329	0.2894	0.27	0.16	0.31	0.32	0.2817	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.914885	NA	NA	0.288721	0.333182	NA	0.268	NA	4.152279
1237	3	87100893	87100893	G	A	intergenic	VGLL3,MIR4795	dist=60636;dist=174446	NA	NA	ncRNA_exonic	ENSG00000241293	NA	NA	NA	Score=737;Name=lod=1320	NA	3p12.1	NA	NA	NA	NA	rs2256481	0.72	0.72	0.696	0.703874	0.8479	0.6766	0.8329	0.4992	0.7689	0.86	0.67	0.82	0.5	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.103305	NA	NA	NA	NA	NA	0.71	NA	4.1521
1237	13	22275394	22275394	A	G	exonic	FGF9	NA	synonymous SNV	FGF9:NM_002010:exon3:c.A447G:p.S149S	exonic	ENSG00000102678	NA	synonymous SNV	ENSG00000102678:ENST00000382353:exon3:c.A447G:p.S149S	Score=627;Name=lod=470	NA	13q12.11	NA	NA	NA	NA	rs9509841	0.83	0.83	0.813	0.832468	0.8449	0.9603	0.8847	0.6339	0.9192	0.85	0.96	0.85	0.64	0.8398	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.1552	NA	NA	0.830116	0.664548	NA	0.848	NA	4.1518506
1237	11	43852491	43852491	T	C	intronic	HSD17B12	NA	NA	NA	ncRNA_exonic	ENSG00000246250	NA	NA	NA	NA	NA	11p11.2	NA	Name=CEBPB,YY1_(C-20),Pol2(b),STAT3	NA	NA	rs6485471	0.42	0.42	0.41	0.389577	0.3907	0.6806	0.3458	0.1967	0.3804	0.4	0.73	0.33	0.17	0.3964	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.417977	1.417977	NA	0.394419	0.238992	NA	0.254	NA	4.1518143
1237	19	51456005	51456005	T	G	UTR5	KLK5	NM_001077491:c.-92A>C,NM_012427:c.-92A>C	NA	NA	ncRNA_UTR5	ENSG00000167754	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs2659093	0.51	0.51	0.471	0.502796	0.3489	0.7183	0.4957	0.4834	0.4703	0.36	0.75	0.46	0.48	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.07245	NA	NA	NA	NA	NA	0.493	NA	4.1511
1237	1	248263626	248263626	T	A	UTR3	OR2L13	NM_175911:c.*10T>A	NA	NA	UTR3	ENSG00000196071	ENST00000366478:c.*10T>A,ENST00000358120:c.*10T>A	NA	NA	NA	NA	1q44	NA	NA	NA	NA	rs4146708	0.07	0.07	0.068	0.0571086	0.0656	0.0893	0.0187	0.0552	0.045	0.06	0.12	0.02	0.06	0.0636	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.553074	NA	NA	0.053152	0.049251	NA	0.065	NA	4.1509814
1237	15	25299259	25299259	T	C	upstream	SNORD116-2	NA	NA	NA	ncRNA_intronic	ENSG00000224078	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs8038299	0.05	0.05	0.055	0.0714856	0.0159	NA	0.0331	0.2141	0.0368	0.02	NA	0.03	0.19	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.689693	NA	NA	NA	NA	NA	0.029	NA	4.1507666
1237	15	25331940	25331940	C	A	upstream;downstream	SNORD116-20;SNORD116-17,SNORD116-19	NA	NA	NA	ncRNA_intronic	ENSG00000224078	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs76349084	0.02	0.02	0.012	0.0231629	0.0159	NA	0.0101	0.0446	0.0348	0.02	NA	0.01	0.03	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.84823	NA	NA	NA	NA	NA	NA	NA	4.1507666
1237	1	110709719	110709719	T	C	exonic	SLC6A17	NA	synonymous SNV	SLC6A17:NM_001010898:exon2:c.T168C:p.D56D	exonic	ENSG00000197106	NA	synonymous SNV	ENSG00000197106:ENST00000331565:exon2:c.T168C:p.D56D	NA	NA	1p13.3	NA	NA	NA	NA	rs7527375	0.37	0.37	0.403	0.392971	0.5249	0.2143	0.353	0.4652	0.3722	0.43	0.19	0.39	0.46	0.4656	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.963628	NA	0.92	0.525465	0.512483	NA	0.188	NA	4.1507016
1237	19	53059235	53059235	T	G	UTR3	ZNF808	NM_001039886:c.*354T>G	NA	NA	UTR3	ENSG00000198482	ENST00000487863:c.*354T>G,ENST00000359798:c.*354T>G	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs9676916	0.28	0.28	0.236	0.299321	0.1829	0.5188	0.3429	0.1876	0.3129	0.18	0.49	0.29	0.16	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.822011	NA	NA	NA	NA	NA	0.181	NA	4.1504334
1237	15	50789163	50789163	A	T	intronic	USP8	NA	NA	NA	ncRNA_exonic	ENSG00000259618	NA	NA	NA	NA	NA	15q21.2	NA	NA	NA	NA	rs10519278	0.12	0.12	0.12	0.133387	0.1829	0.002	0.255	0.0809	0.2025	0.17	NA	0.25	0.1	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.632828	NA	NA	NA	NA	NA	0.159	NA	4.1504333
1237	12	93155535	93155535	G	A	exonic	PLEKHG7	NA	synonymous SNV	PLEKHG7:NM_001004330:exon9:c.G708A:p.T236T	exonic	ENSG00000187510	NA	synonymous SNV	ENSG00000187510:ENST00000344636:exon9:c.G708A:p.T236T	Score=567;Name=lod=269	NA	12q22	NA	NA	NA	NA	rs1504907	0.87	0.87	0.861	0.851038	0.8459	0.9494	0.8674	0.8169	0.7894	0.85	0.94	0.87	0.83	0.8394	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.020372	NA	NA	0.831006	0.803417	NA	0.746	NA	4.1503606
1237	1	211846876	211846876	A	G	exonic	NEK2	NA	synonymous SNV	NEK2:NM_001204182:exon3:c.T504C:p.H168H,NEK2:NM_001204183:exon3:c.T504C:p.H168H,NEK2:NM_002497:exon3:c.T504C:p.H168H	exonic	ENSG00000117650	NA	synonymous SNV	ENSG00000117650:ENST00000366998:exon3:c.T504C:p.H168H,ENSG00000117650:ENST00000366999:exon3:c.T504C:p.H168H,ENSG00000117650:ENST00000540251:exon4:c.T375C:p.H125H	NA	NA	1q32.3	NA	NA	NA	NA	rs701929	0.59	0.59	0.543	0.603035	0.4732	0.7252	0.6671	0.5454	0.6431	0.47	0.78	0.6	0.52	0.5584	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.133448	NA	NA	0.484767	0.534044	NA	0.565	NA	4.1502996
1237	19	7083761	7083761	A	G	UTR3	ZNF557	NM_001044388:c.*6A>G,NM_001044387:c.*6A>G,NM_024341:c.*6A>G	NA	NA	UTR3	ENSG00000130544	ENST00000252840:c.*6A>G,ENST00000414706:c.*6A>G,ENST00000439035:c.*6A>G	NA	NA	NA	NA	19p13.2	NA	Name=ZNF274,SETDB1,KAP1	NA	NA	rs8110740	0.44	0.44	0.432	0.445687	0.3777	0.5218	0.438	0.5227	0.3384	0.38	0.48	0.38	0.51	0.4189	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.964293	NA	NA	0.386587	0.506066	NA	0.377	NA	4.1501464
1237	17	16757437	16757437	C	T	intergenic	KRT16P2,TNFRSF13B	dist=21290;dist=84961	NA	NA	ncRNA_exonic	ENSG00000229749	NA	NA	NA	Score=497;Name=lod=140	NA	17p11.2	NA	NA	NA	NA	rs8079893	0.93	0.93	0.96	0.943091	0.8499	0.9782	0.8919	0.9955	0.9683	0.86	0.98	0.88	1	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.196675	NA	NA	NA	NA	NA	0.935	NA	4.1501
1237	3	172538065	172538065	C	T	UTR3	ECT2	NM_018098:c.*38C>T,NM_001258315:c.*38C>T,NM_001258316:c.*38C>T	NA	NA	UTR3	ENSG00000114346	ENST00000232458:c.*38C>T,ENST00000392692:c.*38C>T,ENST00000417960:c.*38C>T,ENST00000441497:c.*38C>T,ENST00000437296:c.*173C>T	NA	NA	NA	NA	3q26.31	NA	NA	NA	NA	rs76864072	0.05	0.05	0.048	0.0455272	0.0736	0.0407	0.062	0.0091	0.0593	0.08	0.04	0.07	0.03	0.0551	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.668653	NA	NA	0.054611	0.018157	NA	0.036	NA	4.1500224
1237	15	41829230	41829230	A	G	exonic	RPAP1	NA	synonymous SNV	RPAP1:NM_015540:exon2:c.T94C:p.L32L	exonic	ENSG00000103932	NA	synonymous SNV	ENSG00000103932:ENST00000304330:exon2:c.T94C:p.L32L,ENSG00000103932:ENST00000561603:exon2:c.T94C:p.L32L,ENSG00000103932:ENST00000562303:exon2:c.T94C:p.L32L,ENSG00000103932:ENST00000566863:exon2:c.T94C:p.L32L,ENSG00000103932:ENST00000567866:exon2:c.T94C:p.L32L	NA	NA	15q15.1	NA	NA	NA	NA	rs721772	0.41	0.41	0.406	0.391374	0.5199	0.4464	0.3862	0.1528	0.5286	0.52	0.48	0.39	0.16	0.4753	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.600706	NA	NA	0.521512	0.231502	NA	0.457	NA	4.1499546
1237	14	96730142	96730142	A	G	exonic	BDKRB1	NA	synonymous SNV	BDKRB1:NM_000710:exon3:c.A123G:p.P41P	exonic	ENSG00000100739	NA	synonymous SNV	ENSG00000100739:ENST00000216629:exon3:c.A123G:p.P41P,ENSG00000100739:ENST00000553356:exon3:c.A123G:p.P41P	NA	NA	14q32.2	NA	Name=HA-E2F1	NA	NA	rs2071084	0.84	0.84	0.86	0.834265	0.84	0.7798	0.8343	0.9289	0.7566	0.83	0.77	0.83	0.94	0.83	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.408931	NA	NA	0.846744	0.911711	NA	0.819	NA	4.1499226
1237	15	25334180	25334180	T	C	upstream;downstream	SNORD116-22;SNORD116-21	NA	NA	NA	ncRNA_intronic	ENSG00000224078	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs113064344	0.02	0.02	0.014	0.0289537	0.0169	0.001	0.0101	0.0651	0.0348	0.02	NA	0.01	0.05	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.956021	NA	NA	NA	NA	NA	0.007	NA	4.1497666
1237	7	100471044	100471044	C	T	UTR3	TRIP6	NM_003302:c.*119C>T	NA	NA	UTR3	ENSG00000087077	ENST00000200457:c.*119C>T	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs6706	0.11	0.11	0.088	0.0884585	0.1839	0.0308	0.1023	0.0408	0.1043	0.2	0.03	0.12	0.04	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.106561	NA	NA	NA	NA	NA	0.109	NA	4.1494334
1237	17	7360110	7360110	T	C	UTR3	CHRNB1	NM_000747:c.*68T>C	NA	NA	UTR3	ENSG00000170175	ENST00000306071:c.*68T>C,ENST00000536404:c.*68T>C,ENST00000576360:c.*68T>C,ENST00000575379:c.*68T>C	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs2302764	0.3	0.3	0.265	0.305711	0.1839	0.6538	0.3501	0.0953	0.3252	0.18	0.63	0.28	0.11	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.60116	NA	NA	NA	NA	NA	0.217	NA	4.1494334
1237	16	85712105	85712105	C	T	intronic	GINS2	NA	NA	NA	intronic	ENSG00000131153	NA	NA	NA	NA	NA	16q24.1	NA	Name=c-Myc,Pol2	NA	NA	rs3815795	0.21	0.21	0.212	0.183307	0.3012	0.1885	0.2161	0.0968	0.1503	0.29	0.19	0.23	0.11	0.2474	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.317964	NA	NA	0.302209	0.116015	ID=COSN165285;OCCURENCE=1(breast)	0.21	NA	4.149191
1237	11	65495696	65495696	T	C	intergenic	RNASEH2C,AP5B1	dist=7287;dist=45673	NA	NA	downstream	ENSG00000214659	NA	NA	NA	Score=633;Name=lod=496	NA	11q13.1	NA	NA	NA	NA	rs78412025	0.25	0.25	0.246	0.263578	0.3509	0.2321	0.2133	0.1861	0.3466	0.35	0.2	0.24	0.18	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.275132	NA	NA	NA	NA	NA	0.246	NA	4.1491
1237	12	52681282	52681282	T	C	intronic	KRT81	NA	NA	NA	intronic	ENSG00000170442,ENSG00000205426	NA	NA	NA	NA	NA	12q13.13	NA	Name=CTCF,Pol2	NA	NA	rs4761785	0.8	0.8	0.824	0.836661	0.8509	0.6954	0.7406	0.9894	0.8292	0.85	0.67	0.7	0.98	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.181217	NA	NA	NA	NA	NA	0.964	NA	4.1491
1237	12	52681714	52681714	T	C	intronic	KRT81	NA	NA	NA	intronic	ENSG00000170442,ENSG00000205426	NA	NA	NA	NA	NA	12q13.13	NA	Name=Pol2	NA	NA	rs6580872	0.92	0.92	0.935	0.936302	0.8509	0.996	0.9207	0.9902	0.9008	0.85	1	0.88	0.98	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.556657	NA	NA	NA	NA	NA	0.978	NA	4.1491
1237	18	61324033	61324033	T	C	intronic	SERPINB3	NA	NA	NA	intronic	ENSG00000057149	NA	NA	NA	NA	NA	18q21.33	NA	Name=Pol2	NA	NA	rs3786333	0.39	0.39	0.375	0.399161	0.2744	0.6171	0.3415	0.3714	0.3814	0.26	0.6	0.33	0.38	0.3197	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.293044	NA	NA	0.257326	0.360418	NA	0.362	NA	4.148574
1237	5	134781992	134781992	G	A	UTR3	C5orf20	NM_130848:c.*72C>T	NA	NA	UTR3	ENSG00000251380,ENSG00000255833	ENST00000503143:c.*72C>T;ENST00000537858:c.*3152C>T	NA	NA	NA	NA	5q31.1	NA	NA	NA	NA	rs17168355	0.16	0.16	0.157	0.155751	0.1849	0.1577	0.1066	0.1823	0.1227	0.17	0.14	0.09	0.2	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.230425	NA	NA	NA	NA	ID=COSN216960;OCCURENCE=2(liver)	0.145	NA	4.1484334
1237	6	74202160	74202160	A	C	intronic	MTO1	NA	NA	NA	ncRNA_intronic	ENSG00000223821	NA	NA	NA	NA	NA	6q13	NA	NA	NA	NA	rs73452507	0.19	0.19	0.185	0.195487	0.1849	0.2123	0.1686	0.2254	0.1677	0.19	0.2	0.14	0.2	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.143895	NA	NA	NA	NA	NA	0.152	NA	4.1484333
1237	19	12491654	12491654	C	T	intergenic	ZNF442,ZNF799	dist=15179;dist=9174	NA	NA	ncRNA_exonic	ENSG00000248406	NA	NA	NA	Score=355;Name=lod=37	NA	19p13.2	NA	NA	NA	NA	rs57371898	0.33	0.33	0.295	0.326078	0.4374	0.0754	0.3473	0.4259	0.32	0.45	0.07	0.4	0.39	0.4144	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.647993	NA	NA	NA	NA	NA	0.377	NA	4.1482
1237	19	43835611	43835611	A	G	intergenic	PSG9,PRG1	dist=61929;dist=17597	NA	NA	upstream	ENSG00000231412	NA	NA	NA	NA	NA	19q13.31	NA	Name=ZNF263	NA	NA	rs35902331	0.28	0.28	0.296	0.285543	0.3519	0.0774	0.1931	0.4304	0.3016	0.35	0.1	0.2	0.44	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.783331	NA	NA	NA	NA	NA	0.268	NA	4.1481
1237	22	36933668	36933668	G	A	intergenic	EIF3D,CACNG2	dist=8391;dist=23248	NA	NA	upstream	ENSG00000188078	NA	NA	NA	Score=620;Name=lod=440	NA	22q12.3	NA	NA	NA	NA	rs2142824	0.34	0.34	0.349	0.349441	0.3519	0.1905	0.3718	0.4433	0.3681	0.35	0.2	0.35	0.48	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.073601	NA	NA	NA	NA	NA	0.326	NA	4.1481
1237	16	2373357	2373357	G	A	intronic	ABCA3	NA	NA	NA	UTR3	ENSG00000167972	ENST00000567910:c.*150C>T	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs184260155	0.01	0.01	NA	0.0061901	0.0189	NA	0.013	NA	0.0031	0.02	NA	0.01	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.481828	NA	NA	NA	NA	NA	NA	NA	4.1477667
1237	8	72966002	72966002	G	A	exonic	TRPA1	NA	synonymous SNV	TRPA1:NM_007332:exon13:c.C1630T:p.L544L	exonic	ENSG00000104321	NA	synonymous SNV	ENSG00000104321:ENST00000523582:exon10:c.C1186T:p.L396L,ENSG00000104321:ENST00000262209:exon13:c.C1630T:p.L544L	NA	NA	8q13.3	NA	NA	NA	NA	rs3735943	0.56	0.56	0.511	0.580471	0.4791	0.6905	0.6671	0.5091	0.6063	0.49	0.7	0.62	0.47	0.5476	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.259786	NA	NA	0.492326	0.510213	NA	0.558	NA	4.1476406
1237	7	148487395	148487395	T	C	intronic	CUL1	NA	NA	NA	intronic	ENSG00000055130	NA	NA	NA	NA	NA	7q36.1	NA	Name=GATA-1	Name=4	NA	rs2007404	0.68	0.68	0.663	0.671725	0.6054	0.7014	0.7392	0.7163	0.6012	0.61	0.68	0.68	0.76	0.6313	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.169473	NA	NA	0.615814	0.692465	NA	0.572	NA	4.147486
1237	5	134782013	134782013	G	A	UTR3	C5orf20	NM_130848:c.*51C>T	NA	NA	UTR3	ENSG00000251380,ENSG00000255833	ENST00000503143:c.*51C>T;ENST00000537858:c.*3131C>T	NA	NA	NA	NA	5q31.1	NA	NA	NA	NA	rs17168357	0.16	0.16	0.16	0.156749	0.1859	0.1577	0.1066	0.1861	0.1217	0.17	0.14	0.09	0.2	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.888735	NA	NA	NA	NA	NA	0.145	NA	4.1474334
1237	1	109734541	109734541	C	T	intronic	KIAA1324	NA	NA	NA	intronic	ENSG00000116299	NA	NA	NA	NA	NA	1p13.3	NA	Name=ELF1_(SC-631),STAT1	NA	NA	rs645128	0.87	0.87	0.869	0.872604	0.8529	0.998	0.8804	0.711	0.9765	0.87	1	0.87	0.72	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.505081	NA	NA	NA	NA	NA	0.899	NA	4.1471
1237	18	55338656	55338656	G	A	intronic	ATP8B1	NA	NA	NA	ncRNA_intronic	ENSG00000267040,ENSG00000267787	NA	NA	NA	NA	NA	18q21.31	NA	Name=MafK_(SC-477),MafK_(ab50322)	NA	NA	rs317838	0.51	0.51	0.463	0.476438	0.3996	0.6627	0.5605	0.416	0.3855	0.39	0.67	0.56	0.46	0.4226	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.344628	NA	NA	0.364038	0.393052	NA	0.471	NA	4.1470953
1237	13	21620085	21620085	T	C	exonic	LATS2	NA	synonymous SNV	LATS2:NM_014572:exon2:c.A81G:p.K27K	exonic	ENSG00000150457	NA	synonymous SNV	ENSG00000150457:ENST00000382592:exon2:c.A81G:p.K27K,ENSG00000150457:ENST00000542899:exon2:c.A81G:p.K27K	Score=461;Name=lod=100	NA	13q12.11	NA	NA	NA	NA	rs7317471	0.81	0.81	0.778	0.807508	0.828	0.8839	0.8501	0.6286	0.9192	0.82	0.9	0.85	0.66	0.8496	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.291053	NA	NA	0.842558	0.659555	NA	0.812	NA	4.1465086
1237	10	95347475	95347475	C	T	UTR3	FFAR4	NM_181745:c.*109C>T,NM_001195755:c.*109C>T	NA	NA	UTR3	ENSG00000186188	ENST00000371483:c.*109C>T,ENST00000371481:c.*109C>T	NA	NA	NA	NA	10q23.33	NA	NA	NA	NA	rs17108973	0.14	0.14	0.141	0.176518	0.1869	0.0972	0.147	0.1172	0.3487	0.18	0.1	0.16	0.12	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.120333	NA	NA	NA	NA	NA	0.21	NA	4.1464334
1237	X	299501	299501	C	T	intronic	PPP2R3B	NA	NA	NA	intronic	ENSG00000167393	NA	NA	NA	NA	NA	Xp22.33	NA	Name=ZNF263	NA	NA	rs2738374	0.35	0.35	0.34658	NA	NA	NA	NA	NA	NA	0.41	0.41	0.37	0.16	0.4137	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.148086	NA	NA	0.440243	0.192273	NA	0.109	NA	4.146057
1237	16	1608177	1608177	A	G	intronic	IFT140	NA	NA	NA	intronic	ENSG00000187535	NA	NA	NA	NA	NA	16p13.3	Score=797;Name=V$OCT1_01	NA	NA	NA	rs2235641	0.4	0.4	0.412	0.421126	0.2525	0.4762	0.379	0.5673	0.3701	0.26	0.45	0.38	0.55	0.3354	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.512616	NA	NA	0.266279	0.509095	NA	0.348	NA	4.145821
1237	9	101911656	101911656	A	G	UTR3	TGFBR1	NM_001130916:c.*69A>G,NM_004612:c.*69A>G	NA	NA	UTR3	ENSG00000106799	ENST00000374994:c.*69A>G,ENST00000374990:c.*69A>G,ENST00000552516:c.*69A>G,ENST00000549766:c.*316A>G	NA	NA	NA	NA	9q22.33	NA	NA	NA	NA	rs868	0.14	0.14	0.135	0.117412	0.1879	0.0129	0.1297	0.1467	0.1043	0.2	0.01	0.16	0.18	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.970045	NA	NA	NA	NA	NA	0.167	NA	4.1454334
1238	19	39229316	39229316	A	G	intronic	CAPN12	NA	NA	NA	ncRNA_exonic	ENSG00000267892	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs12983550	0.06	0.06	0.037	0.0702875	0.0616	0.0476	0.0821	0.056	0.1135	0.06	0.06	0.06	0.05	0.064	0.063	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.007394	NA	NA	0.06314	0.048343	NA	0.087	NA	4.1445933
1238	12	96367900	96367900	G	T	UTR3	HAL	NM_002108:c.*110C>A,NM_001258334:c.*238C>A,NM_001258333:c.*110C>A	NA	NA	UTR3	ENSG00000084110	ENST00000261208:c.*110C>A,ENST00000541929:c.*110C>A,ENST00000544080:c.*1513C>A,ENST00000538703:c.*238C>A,ENST00000546999:c.*1496C>A	NA	NA	NA	NA	12q23.1	NA	NA	NA	NA	rs2230885	0.18	0.18	0.189	0.177117	0.1889	0.1002	0.1167	0.289	0.136	0.19	0.1	0.13	0.28	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.258472	NA	NA	NA	NA	NA	0.268	NA	4.1444334
1238	7	151135457	151135457	T	C	intronic	CRYGN	NA	NA	NA	ncRNA_intronic	ENSG00000241456	NA	NA	NA	NA	NA	7q36.1	NA	NA	NA	NA	rs2074999	0.17	0.17	0.154	0.150559	0.1889	0.1508	0.1744	0.1619	0.0787	0.19	0.15	0.18	0.16	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.919889	NA	NA	NA	NA	NA	0.181	NA	4.1444333
1238	2	105388360	105388360	T	A	intergenic	LOC284998,LOC100506421	dist=14183;dist=33523	NA	NA	downstream	ENSG00000213301	NA	NA	NA	Score=505;Name=lod=151	NA	2q12.1	NA	NA	NA	NA	rs13034712	0.24	0.24	0.214	0.250599	0.3559	0.0863	0.3213	0.2413	0.274	0.33	0.07	0.34	0.21	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.314341	NA	NA	NA	NA	NA	0.319	NA	4.1441
1238	7	56356826	56356826	A	C	intergenic	NUPR1L,LOC650226	dist=172736;dist=134571	NA	NA	ncRNA_exonic	ENSG00000223559	NA	NA	NA	Score=797;Name=lod=2309	NA	7p11.2	NA	NA	NA	NA	rs3813512	0.82	0.82	0.795	0.855232	0.8559	0.6062	0.902	0.9622	0.9335	0.85	0.61	0.89	0.96	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.064622	NA	NA	NA	NA	NA	0.833	NA	4.1441
1238	14	21630781	21630781	C	T	intergenic	OR5AU1,LINC00641	dist=6597;dist=37457	NA	NA	ncRNA_exonic	ENSG00000259102	NA	NA	NA	Score=795;Name=lod=2266	NA	14q11.2	NA	NA	NA	NA	rs11627483	0.77	0.77	0.776	0.785942	0.8559	0.5	0.8631	0.8457	0.8732	0.86	0.52	0.87	0.86	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.221823	NA	NA	NA	NA	NA	0.783	NA	4.1441
1238	11	5602790	5602790	A	G	exonic	OR52B6	NA	synonymous SNV	OR52B6:NM_001005162:exon1:c.A684G:p.L228L	exonic	ENSG00000187747	NA	synonymous SNV	ENSG00000187747:ENST00000345043:exon1:c.A684G:p.L228L	NA	NA	11p15.4	NA	NA	NA	NA	rs2163946	0.69	0.69	0.694	0.716853	0.4761	0.9802	0.67	0.7413	0.6933	0.47	0.97	0.63	0.72	0.5741	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.561382	NA	NA	0.472682	0.708724	NA	0.623	NA	4.1437846
1238	11	62543180	62543180	A	G	intronic	TAF6L	NA	NA	NA	UTR5	ENSG00000162227	ENST00000526261:c.-76A>G	NA	NA	NA	NA	11q12.3	NA	NA	NA	NA	rs11231210	0.13	0.13	0.131	0.145567	0.0229	0.1538	0.0476	0.3442	0.0644	0.03	0.14	0.05	0.32	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.627435	NA	NA	NA	NA	NA	0.094	NA	4.1437667
1238	X	1752017	1752017	G	T	intronic	ASMT	NA	NA	NA	ncRNA_intronic	ENSG00000249358	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs4521942	0.08	0.08	0.06518	NA	NA	NA	NA	NA	NA	0.09	0.04	0.07	0.1	0.101	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.802276	NA	NA	0.088571	0.137994	NA	0.138	NA	4.1437623
1238	19	37101542	37101542	C	T	intronic	ZNF382	NA	NA	NA	UTR5	ENSG00000161298	ENST00000590785:c.-18C>T	NA	NA	NA	NA	19q13.12	NA	NA	NA	NA	rs185148972	0.01	0.01	NA	0.00379393	0.007	NA	0.0173	NA	NA	0.01	NA	0.02	NA	0.0064	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.316647	NA	NA	0.009767	0.002951	NA	0.007	NA	4.1434997
1238	3	41900951	41900951	C	A	intronic	ULK4	NA	NA	NA	ncRNA_exonic	ENSG00000223513	NA	NA	NA	NA	NA	3p22.1	NA	NA	NA	NA	rs2625667	0.3	0.3	0.308	0.315296	0.1899	0.1468	0.183	0.7088	0.18	0.2	0.15	0.18	0.7	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.979728	NA	NA	NA	NA	NA	0.355	NA	4.1434333
1238	17	1494567	1494567	G	A	exonic	SLC43A2	NA	synonymous SNV	SLC43A2:NM_152346:exon8:c.C927T:p.A309A	exonic	ENSG00000167703	NA	synonymous SNV	ENSG00000167703:ENST00000412517:exon4:c.C516T:p.A172A,ENSG00000167703:ENST00000301335:exon8:c.C927T:p.A309A,ENSG00000167703:ENST00000382147:exon8:c.C927T:p.A309A,ENSG00000167703:ENST00000571650:exon8:c.C927T:p.A309A	NA	NA	17p13.3	NA	NA	NA	NA	rs12953268	0.31	0.31	0.304	0.279353	0.5388	0.1508	0.3127	0.0832	0.3865	0.54	0.15	0.36	0.11	0.4363	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.016251	NA	NA	0.548256	0.164775	ID=COSM436059;OCCURENCE=1(breast)	0.304	NA	4.1433106
1238	19	12491639	12491639	A	G	intergenic	ZNF442,ZNF799	dist=15164;dist=9189	NA	NA	ncRNA_exonic	ENSG00000248406	NA	NA	NA	Score=355;Name=lod=37	NA	19p13.2	NA	NA	NA	NA	rs59301182	0.3	0.3	0.289	0.333067	0.4384	0.0754	0.3588	0.4455	0.32	0.42	0.06	0.38	0.34	0.4183	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.361519	NA	NA	NA	NA	NA	0.384	NA	4.1433
1238	11	5602928	5602928	G	C	exonic	OR52B6	NA	synonymous SNV	OR52B6:NM_001005162:exon1:c.G822C:p.A274A	exonic	ENSG00000187747	NA	synonymous SNV	ENSG00000187747:ENST00000345043:exon1:c.G822C:p.A274A	NA	NA	11p15.4	NA	NA	NA	NA	rs10838375	0.69	0.69	0.706	0.715855	0.4761	0.9792	0.67	0.7383	0.6933	0.47	0.97	0.63	0.72	0.5738	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.346092	NA	NA	0.473551	0.706511	NA	0.623	NA	4.1432156
1238	7	32908945	32908945	T	C	UTR3	KBTBD2	NM_015483:c.*12A>G	NA	NA	UTR3	ENSG00000170852	ENST00000304056:c.*12A>G	NA	NA	NA	NA	7p14.3	NA	NA	NA	NA	rs62467365	0.07	0.07	0.076	0.0644968	0.0676	0.1518	0.0288	0.0023	0.0808	0.07	0.13	0.04	0.002	0.0628	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.820973	NA	NA	0.059767	0.011802	NA	0.043	NA	4.1431664
1238	6	100895344	100895344	C	T	intronic	SIM1	NA	NA	NA	intronic	ENSG00000112246	NA	NA	NA	NA	NA	6q16.3	NA	NA	Name=33	NA	rs397662	0.92	0.92	0.921	0.937899	0.8569	0.9792	0.9409	0.966	0.9387	0.85	0.98	0.91	0.96	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.480998	NA	NA	NA	NA	NA	0.906	NA	4.1431
1238	13	75814070	75814070	C	G	ncRNA_exonic	CTAGE11P	NA	NA	NA	ncRNA_exonic	ENSG00000214249	NA	NA	NA	NA	NA	13q22.2	NA	NA	NA	NA	rs61960513	0.16	0.16	0.13	0.125	0.3032	0.0516	0.1945	0.031	0.0951	0.29	0.06	0.21	0.04	0.2204	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.28604	NA	NA	NA	NA	NA	0.109	NA	4.1430666
1238	19	6466482	6466482	A	G	exonic	CRB3	NA	synonymous SNV	CRB3:NM_139161:exon4:c.A162G:p.P54P,CRB3:NM_174881:exon4:c.A162G:p.P54P	exonic	ENSG00000130545	NA	synonymous SNV	ENSG00000130545:ENST00000308243:exon3:c.A162G:p.P54P,ENSG00000130545:ENST00000356762:exon4:c.A162G:p.P54P,ENSG00000130545:ENST00000598494:exon4:c.A162G:p.P54P,ENSG00000130545:ENST00000600229:exon4:c.A162G:p.P54P	NA	NA	19p13.3	NA	NA	NA	NA	rs348362	0.42	0.42	0.407	0.423323	0.5189	0.1875	0.3127	0.6233	0.3763	0.49	0.16	0.36	0.66	0.4545	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.088518	NA	NA	0.550349	0.573763	NA	0.5	NA	4.1429176
1238	12	52660812	52660812	G	A	intergenic	KRT7,KRT81	dist=18103;dist=18885	NA	NA	intronic	ENSG00000170442	NA	NA	NA	Score=549;Name=lod=227	NA	12q13.13	NA	NA	NA	NA	rs2852474	0.18	0.18	0.183	0.195487	0.2704	0.0962	0.1787	0.1528	0.2904	0.26	0.09	0.19	0.14	0.2537	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.370267	NA	NA	NA	NA	ID=COSM147518;OCCURENCE=1(stomach)	0.181	NA	4.1425667
1238	1	26589698	26589698	T	A	intronic	CEP85	NA	NA	NA	ncRNA_exonic	ENSG00000270733	NA	NA	NA	NA	NA	1p36.11	NA	NA	NA	NA	rs12142535	0.13	0.13	0.125	0.132188	0.1909	0.0228	0.1066	0.2027	0.1074	0.21	0.02	0.11	0.16	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.639679	NA	NA	NA	NA	NA	0.094	NA	4.1424333
1238	1	207748793	207748793	A	G	intronic	CR1	NA	NA	NA	ncRNA_intronic	ENSG00000236911	NA	NA	NA	NA	NA	1q32.2	NA	NA	NA	NA	rs650877	0.34	0.34	0.336	0.447085	0.1909	0.3274	0.3199	0.7648	0.4949	0.18	0.23	0.34	0.72	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.819267	NA	NA	NA	NA	NA	0.355	NA	4.1424333
1238	5	54320700	54320700	C	T	intronic	GZMK	NA	NA	NA	ncRNA_intronic	ENSG00000240535	NA	NA	NA	NA	NA	5q11.2	NA	NA	NA	NA	rs9292078	0.35	0.35	0.336	0.35643	0.1909	0.4653	0.389	0.5242	0.1646	0.18	0.45	0.35	0.48	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.253242	NA	NA	NA	NA	NA	0.319	NA	4.1424333
1238	7	29252692	29252692	T	G	intronic	CHN2	NA	NA	NA	ncRNA_exonic	ENSG00000237065	NA	NA	NA	NA	NA	7p14.3	NA	NA	NA	NA	rs112444579	0.1	0.1	0.057	0.0780751	0.1909	0.0188	0.1542	0.0348	0.0276	0.2	0.01	0.15	0.02	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.005883	NA	NA	NA	NA	NA	0.043	NA	4.1424333
1238	7	29252724	29252724	A	T	intronic	CHN2	NA	NA	NA	ncRNA_exonic	ENSG00000237065	NA	NA	NA	NA	NA	7p14.3	NA	NA	NA	NA	rs113501072	0.1	0.1	0.06	0.0780751	0.1909	0.0188	0.1542	0.0348	0.0276	0.2	0.01	0.16	0.02	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.020428	NA	NA	NA	NA	NA	0.036	NA	4.1424333
1238	4	159076826	159076826	C	T	exonic	FAM198B	NA	synonymous SNV	FAM198B:NM_001128424:exon3:c.G1062A:p.S354S,FAM198B:NM_016613:exon3:c.G1062A:p.S354S,FAM198B:NM_001031700:exon4:c.G1086A:p.S362S	exonic	ENSG00000164125	NA	synonymous SNV	ENSG00000164125:ENST00000590648:exon2:c.G180A:p.S60S,ENSG00000164125:ENST00000296530:exon3:c.G1062A:p.S354S,ENSG00000164125:ENST00000585682:exon3:c.G1062A:p.S354S,ENSG00000164125:ENST00000393807:exon4:c.G1086A:p.S362S	Score=563;Name=lod=259	NA	4q32.1	NA	NA	NA	NA	rs6830702	0.79	0.79	0.79	0.772564	0.8489	0.9484	0.8602	0.5061	0.8108	0.84	0.95	0.83	0.48	0.8316	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.2052	NA	NA	0.844033	0.562642	NA	0.819	NA	4.1421336
1238	13	53227301	53227301	C	T	intronic	SUGT1	NA	NA	NA	intronic	ENSG00000165416	NA	NA	NA	NA	NA	13q14.3	NA	NA	Name=9	NA	rs9536219	0.32	0.32	0.274	0.282348	0.4533	0.2044	0.4625	0.1573	0.228	0.44	0.2	0.43	0.18	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.163594	NA	NA	0.404777	0.172688	ID=COSN164506;OCCURENCE=1(breast)	0.167	NA	4.141923
1238	17	25746737	25746737	C	A	ncRNA_intronic	TBC1D3P5	NA	NA	NA	ncRNA_intronic	ENSG00000266433	NA	NA	NA	NA	NA	17q11.1	NA	NA	NA	NA	rs1973152	0.54	0.54	0.532	0.504393	0.5249	0.6696	0.4395	0.413	0.4826	0.55	0.66	0.45	0.45	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.066425	NA	NA	NA	NA	ID=COSN165369;OCCURENCE=1(breast)	0.601	NA	4.1417666
1238	2	228788722	228788722	T	C	UTR3	DAW1	NM_178821:c.*38T>C	NA	NA	UTR3	ENSG00000123977	ENST00000373666:c.*392T>C,ENST00000309931:c.*38T>C	NA	NA	NA	NA	2q36.3	NA	NA	NA	NA	rs16824231	0.05	0.05	0.043	0.0519169	0.0676	0.0784	0.0375	0.0151	0.0685	0.07	0.07	0.04	0.02	0.0591	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.20834	NA	NA	0.064884	0.017703	NA	0.029	NA	4.1417494
1238	7	29252163	29252163	A	G	intronic	CHN2	NA	NA	NA	ncRNA_exonic	ENSG00000237065	NA	NA	NA	NA	NA	7p14.3	NA	NA	NA	NA	rs13311144	0.1	0.1	0.087	0.0788738	0.1918	0.0188	0.1542	0.0371	0.0276	0.2	0.01	0.16	0.02	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.409671	NA	NA	NA	NA	NA	0.051	NA	4.1415333
1238	19	35434512	35434512	T	C	exonic	ZNF30	NA	synonymous SNV	ZNF30:NM_001099437:exon5:c.T645C:p.S215S,ZNF30:NM_001099438:exon5:c.T645C:p.S215S,ZNF30:NM_194325:exon5:c.T642C:p.S214S	exonic	ENSG00000168661	NA	synonymous SNV	ENSG00000168661:ENST00000303586:exon5:c.T645C:p.S215S,ENSG00000168661:ENST00000439785:exon5:c.T645C:p.S215S,ENSG00000168661:ENST00000601142:exon5:c.T642C:p.S214S,ENSG00000168661:ENST00000426813:exon6:c.T399C:p.S133S	NA	NA	19q13.11	NA	NA	NA	NA	rs2651109	0.63	0.63	0.651	0.653355	0.5129	0.6052	0.4049	0.9402	0.636	0.51	0.63	0.47	0.94	0.5348	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.256739	NA	NA	0.477767	0.856259	NA	0.645	NA	4.1411996
1238	7	95001555	95001555	C	T	exonic	PON3	NA	synonymous SNV	PON3:NM_000940:exon4:c.G297A:p.A99A	exonic	ENSG00000105852	NA	synonymous SNV	ENSG00000105852:ENST00000265627:exon4:c.G297A:p.A99A,ENSG00000105852:ENST00000427422:exon4:c.G297A:p.A99A,ENSG00000105852:ENST00000451904:exon4:c.G297A:p.A99A	NA	NA	7q21.3	NA	NA	NA	NA	rs1053275	0.63	0.63	0.636	0.660543	0.501	0.7788	0.6772	0.6422	0.7157	0.49	0.78	0.64	0.67	0.5675	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.747296	NA	NA	0.457326	0.567635	NA	0.587	NA	4.1408406
1238	22	32754036	32754036	G	A	UTR5	RFPL3	NM_001098535:c.-23G>A	NA	NA	UTR5	ENSG00000128276	ENST00000249007:c.-23G>A	NA	NA	NA	NA	22q12.3	NA	NA	NA	NA	rs11089557	0.16	0.16	0.112	0.144369	0.0408	0.4544	0.0908	0.0303	0.1237	0.04	0.45	0.1	0.02	0.1014	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.579287	NA	NA	0.050559	0.037037	ID=COSN166739;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.08	NA	4.1405744
1238	15	63363402	63363402	G	A	UTR3	TPM1	NM_001018006:c.*31G>A,NM_001018004:c.*31G>A,NM_001018020:c.*31G>A,NM_001018007:c.*31G>A	NA	NA	ncRNA_UTR3	ENSG00000140416	NA	NA	NA	NA	NA	15q22.2	NA	NA	NA	NA	rs11558748	NA	NA	NA	0.372005	0.3519	0.4841	0.3934	0.2776	0.3896	NA	NA	NA	NA	0.0078	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.655663	NA	NA	NA	NA	NA	0.014	NA	4.1403
1238	12	51686204	51686204	T	C	intronic	BIN2	NA	NA	NA	intronic	ENSG00000110934	NA	NA	NA	NA	NA	12q13.13	NA	Name=CTCF,CTCF_(C-20)	NA	NA	rs7306505	0.79	0.79	0.773	0.780751	0.8598	0.8433	0.8617	0.5635	0.8712	0.85	0.84	0.83	0.6	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.397363	NA	NA	NA	NA	NA	0.812	NA	4.1402
1238	20	50726895	50726895	G	T	intronic	ZFP64	NA	NA	NA	ncRNA_exonic	ENSG00000233347	NA	NA	NA	NA	NA	20q13.2	NA	NA	NA	NA	rs7273444	0.13	0.13	0.118	0.112021	0.1938	0.0119	0.1239	0.1717	0.0419	0.2	0.01	0.14	0.15	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.474301	NA	NA	NA	NA	NA	0.094	NA	4.1395333
1238	17	902869	902869	A	G	intronic	TIMM22	NA	NA	NA	intronic	ENSG00000177370	NA	NA	NA	NA	NA	17p13.3	NA	Name=CTCF	NA	NA	rs12941159	0.15	0.15	0.126	0.103435	0.3052	0.002	0.1787	0.0189	0.0613	0.3	0.0017	0.21	0.04	0.2277	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.189836	2.189836	NA	0.328023	0.064911	NA	0.217	NA	4.139077
1238	14	106926388	106926388	T	C	intergenic	LINC00226,LINC00221	dist=181422;dist=12067	NA	NA	exonic	ENSG00000232216	NA	nonsynonymous SNV	ENSG00000232216:ENST00000434710:exon2:c.A154G:p.T52A	NA	NA	14q32.33	NA	NA	NA	NA	rs2467910	0.36	0.36	0.329	NA	NA	NA	NA	NA	NA	0.31	0.38	0.3	0.46	0.3689	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.839343	NA	0.66	0.325691	0.434985	NA	0.326	NA	4.1387424
1238	11	119692663	119692663	T	C	intergenic	PVRL1,TRIM29	dist=93228;dist=289331	NA	NA	ncRNA_exonic	ENSG00000254406	NA	NA	NA	Score=702;Name=lod=950	NA	11q23.3	NA	NA	NA	NA	rs542903	0.81	0.81	0.789	0.772764	0.8618	0.7937	0.8934	0.6672	0.7168	0.86	0.83	0.86	0.67	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.064372	NA	NA	NA	NA	NA	0.804	NA	4.1382
1238	18	8413996	8413996	A	G	intergenic	PTPRM,RAB12	dist=7137;dist=195447	NA	NA	ncRNA_exonic	ENSG00000266613	NA	NA	NA	Score=813;Name=lod=2697	NA	18p11.23	NA	NA	NA	NA	rs647241	0.8	0.8	0.804	0.797724	0.8618	0.6458	0.7622	0.8578	0.8323	0.87	0.69	0.8	0.85	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.303256	NA	NA	NA	NA	NA	0.848	NA	4.1382
1238	7	72334630	72334630	C	G	ncRNA_exonic	SPDYE7P	NA	NA	NA	ncRNA_intronic	ENSG00000179994	NA	NA	NA	NA	NA	7q11.23	NA	NA	NA	NA	rs3873463	0.3	0.3	0.189	0.459065	0.5288	0.4653	0.4971	0.2799	0.5961	0.34	0.34	0.4	0.13	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.54452	NA	NA	NA	NA	NA	NA	NA	4.1378666
1238	6	169629861	169629861	G	C	intronic	THBS2	NA	NA	NA	ncRNA_intronic	ENSG00000226445	NA	NA	NA	NA	NA	6q27	NA	NA	NA	NA	rs9505891	0.31	0.31	0.304	0.313099	0.1958	0.37	0.3228	0.4213	0.2219	0.2	0.36	0.28	0.42	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.3536	NA	NA	NA	NA	NA	0.232	NA	4.1375333
1238	15	75981507	75981507	A	G	exonic	CSPG4	NA	synonymous SNV	CSPG4:NM_001897:exon3:c.T1899C:p.G633G	exonic	ENSG00000173546	NA	synonymous SNV	ENSG00000173546:ENST00000308508:exon3:c.T1899C:p.G633G	NA	NA	15q24.2	NA	NA	NA	NA	rs12900539	0.35	0.35	0.286	0.373403	0.5179	0.1865	0.4986	0.2716	0.4663	0.51	0.14	0.48	0.27	0.4758	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.324733	NA	NA	0.535864	0.294399	NA	0.377	NA	4.1371026
1238	7	98460824	98460824	C	A	exonic	TMEM130	NA	synonymous SNV	TMEM130:NM_001134450:exon2:c.G285T:p.V95V,TMEM130:NM_152913:exon2:c.G285T:p.V95V	exonic	ENSG00000166448	NA	synonymous SNV	ENSG00000166448:ENST00000339375:exon2:c.G285T:p.V95V,ENSG00000166448:ENST00000416379:exon2:c.G285T:p.V95V,ENSG00000166448:ENST00000445790:exon2:c.G33T:p.V11V,ENSG00000166448:ENST00000450876:exon2:c.G33T:p.V11V,ENSG00000166448:ENST00000546258:exon2:c.G228T:p.V76V	NA	NA	7q22.1	Score=889;Name=V$MYCMAX_02	NA	NA	NA	rs10238224	0.7	0.7	0.662	0.686502	0.8519	0.877	0.7608	0.2171	0.9018	0.85	0.88	0.73	0.23	0.813	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.390473	NA	NA	0.865	0.331366	NA	0.667	NA	4.1367666
1238	20	52561372	52561372	A	G	UTR3	BCAS1	NM_003657:c.*89T>C	NA	NA	UTR3	ENSG00000064787	ENST00000395961:c.*89T>C,ENST00000371435:c.*89T>C,ENST00000434986:c.*89T>C,ENST00000422805:c.*89T>C	NA	NA	NA	NA	20q13.2	NA	NA	NA	NA	rs2072241	0.24	0.24	0.232	0.234625	0.1968	0.37	0.2133	0.1672	0.2403	0.2	0.37	0.2	0.16	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.472423	NA	NA	NA	NA	NA	0.225	NA	4.1365334
1238	22	42195410	42195410	T	C	UTR3	MEI1	NM_152513:c.*107T>C	NA	NA	UTR3	ENSG00000167077	ENST00000401548:c.*107T>C,ENST00000300398:c.*107T>C,ENST00000400107:c.*107T>C,ENST00000403492:c.*107T>C,ENST00000423900:c.*107T>C	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs139561	0.16	0.16	0.118	0.159145	0.1968	0.0635	0.415	0.0204	0.2249	0.19	0.06	0.42	0.03	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.411357	2.411357	NA	NA	NA	ID=COSN166765;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.138	NA	4.1365334
1238	15	91178278	91178278	C	T	intronic	CRTC3	NA	NA	NA	ncRNA_intronic	ENSG00000259736	NA	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs7163000	0.27	0.27	0.212	0.289537	0.1968	0.2579	0.1441	0.5507	0.1677	0.2	0.21	0.17	0.51	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.788719	NA	NA	NA	NA	NA	0.196	NA	4.1365333
1238	15	66794037	66794037	A	C	intronic	RPL4	NA	NA	NA	intronic	ENSG00000174444	NA	NA	NA	NA	NA	15q22.31	NA	NA	Name=6	NA	rs10851759	0.89	0.89	0.893	0.914337	0.8638	0.9335	0.8718	0.9486	0.9305	0.86	0.92	0.86	0.94	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.111091	NA	NA	NA	NA	NA	0.833	NA	4.1362
1238	20	16493580	16493580	A	G	intronic	KIF16B	NA	NA	NA	intronic	ENSG00000089177	NA	NA	NA	NA	NA	20p12.1	NA	NA	Name=2	NA	rs6135776	0.25	0.25	0.239	0.241214	0.2843	0.38	0.2839	0.0582	0.271	0.28	0.36	0.28	0.05	0.2732	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.26379	NA	NA	0.306628	0.104176	NA	0.188	NA	4.135872
1238	19	4945914	4945914	A	C	exonic	UHRF1	NA	unknown	UNKNOWN	ncRNA_exonic	ENSG00000034063	NA	NA	NA	Score=457;Name=lod=96	NA	19p13.3	NA	NA	NA	NA	rs2250982	0.59	0.59	0.46	0.660543	0.6143	0.6806	0.5836	0.6899	0.7025	0.57	0.61	0.56	0.63	0.5734	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.333461	NA	NA	0.50995	0.57284	NA	0.543	NA	4.1356833
1238	3	178960607	178960607	A	G	UTR3	KCNMB3	NM_171830:c.*85T>C,NM_171829:c.*85T>C,NM_014407:c.*85T>C,NM_171828:c.*85T>C	NA	NA	UTR3	ENSG00000171121	ENST00000392686:c.*85T>C,ENST00000392685:c.*85T>C,ENST00000349697:c.*85T>C,ENST00000314235:c.*85T>C,ENST00000485523:c.*85T>C	NA	NA	NA	NA	3q26.32	NA	NA	NA	NA	rs1059691	0.22	0.22	0.214	0.278754	0.1978	0.1081	0.2594	0.4939	0.2607	0.18	0.08	0.25	0.45	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.071057	NA	NA	NA	NA	NA	0.348	NA	4.1355334
1238	3	182735211	182735211	T	G	intronic	MCCC1	NA	NA	NA	ncRNA_exonic	ENSG00000243368	NA	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs2292056	0.32	0.32	0.29	0.303115	0.1978	0.5694	0.2997	0.1732	0.3149	0.22	0.59	0.35	0.16	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.337557	NA	NA	NA	NA	NA	0.391	NA	4.1355333
1238	16	4776805	4776805	G	A	intronic	ANKS3	NA	NA	NA	UTR5	ENSG00000168096	ENST00000592698:c.-12663C>T	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs12931781	0.0046	0.0046	0.004	0.00259585	0.0109	NA	0.0014	NA	0.001	0.01	NA	0.0028	NA	0.0095	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.835361	3.835361	NA	0.011163	0.002959	NA	0.007	NA	4.1351037
1239	13	21895037	21895037	G	T	ncRNA_intronic	MIPEPP3	NA	NA	NA	ncRNA_intronic	ENSG00000224429	NA	NA	NA	NA	NA	13q12.11	NA	NA	NA	NA	rs9580080	0.41	0.41	0.382	0.415136	0.5318	0.3165	0.3588	0.3646	0.5051	0.53	0.31	0.4	0.36	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.784359	NA	NA	NA	NA	NA	0.471	NA	4.1348666
1239	15	84784964	84784964	C	T	ncRNA_intronic	EFTUD1P1	NA	NA	NA	ncRNA_intronic	ENSG00000259404	NA	NA	NA	NA	NA	15q25.2	NA	NA	NA	NA	rs11637158	NA	NA	0.3	0.348442	0.5318	0.2728	0.3689	0.1536	0.4867	NA	NA	NA	NA	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.103676	NA	NA	NA	NA	ID=COSN165023;OCCURENCE=1(NS)	0.246	NA	4.1348666
1239	6	31382675	31382675	C	T	intronic	MICA	NA	NA	NA	ncRNA_intronic	ENSG00000206337	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs78470849	0.23	0.23	0.186	0.252796	0.1988	0.1776	0.2925	0.3404	0.2393	0.2	0.16	0.29	0.31	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.779286	NA	NA	NA	NA	NA	0.203	NA	4.1345333
1239	14	65419293	65419293	A	G	intronic	CHURC1-FNTB,RAB15	NA	NA	NA	intronic	ENSG00000125954,ENSG00000139998	NA	NA	NA	NA	NA	14q23.3	Score=930;Name=V$LMO2COM_01	NA	NA	NA	rs45454295	0.4	0.4	0.385	0.373203	0.2853	0.6577	0.2752	0.3714	0.2423	0.28	0.65	0.3	0.35	0.31	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.869428	NA	NA	0.270349	0.345438	NA	0.261	NA	4.134351
1239	14	65550816	65550816	T	A	UTR3	MAX	NM_145114:c.*82A>T,NM_001271068:c.*82A>T	NA	NA	ncRNA_UTR3	ENSG00000125952	NA	NA	NA	NA	NA	14q23.3	NA	NA	NA	NA	rs7159443	0.46	0.46	0.49	0.515575	0.3658	0.4177	0.2507	0.8472	0.5102	0.36	0.42	0.27	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.865048	NA	NA	NA	NA	NA	0.464	NA	4.1342
1239	12	96259951	96259951	G	A	UTR3	SNRPF	NM_003095:c.*102G>A	NA	NA	UTR3	ENSG00000139343	ENST00000266735:c.*102G>A	NA	NA	NA	NA	12q23.1	NA	NA	NA	NA	rs17369927	0.09	0.09	0.06	0.0782748	0.1998	0.0218	0.0908	0.0076	0.0982	0.2	0.01	0.1	0.01	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.168166	NA	NA	NA	NA	NA	0.08	NA	4.1335334
1239	17	80059487	80059487	C	T	UTR3	CCDC57	NM_198082:c.*71G>A	NA	NA	UTR3	ENSG00000176155	ENST00000392347:c.*71G>A,ENST00000389641:c.*71G>A	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs1127678	0.18	0.18	0.192	0.176717	0.1998	0.0565	0.134	0.2988	0.1421	0.21	0.07	0.15	0.31	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.538789	NA	NA	NA	NA	NA	0.225	NA	4.1335334
1239	5	79355471	79355471	C	T	intronic	THBS4	NA	NA	NA	ncRNA_intronic	ENSG00000249825	NA	NA	NA	NA	NA	5q14.1	NA	NA	NA	NA	rs401302	0.27	0.27	0.266	0.298722	0.1998	0.2123	0.3098	0.4334	0.2996	0.18	0.23	0.3	0.42	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.595436	NA	NA	NA	NA	ID=COSN167509;OCCURENCE=1(large_intestine)	0.196	NA	4.1335333
1239	19	19916736	19916736	T	C	intronic	ZNF506	NA	NA	NA	ncRNA_intronic	ENSG00000267419,ENSG00000267581	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs12973032	0.28	0.28	0.289	0.285942	0.1998	0.2847	0.2651	0.4713	0.1401	0.2	0.25	0.26	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.958747	NA	NA	NA	NA	NA	0.246	NA	4.1335333
1239	2	220165763	220165763	T	C	intronic	PTPRN	NA	NA	NA	ncRNA_intronic	ENSG00000230432	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs2292606	0.06	0.06	0.055	0.0696885	0.0964	0.0437	0.0764	0.0212	0.1299	0.09	0.04	0.1	0.02	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.035564	NA	NA	0.104337	0.03396	NA	0.123	NA	4.1325963
1239	5	109202725	109202725	A	G	UTR3	MAN2A1	NM_002372:c.*26A>G	NA	NA	UTR3	ENSG00000112893	ENST00000261483:c.*26A>G	NA	NA	NA	NA	5q21.3	NA	NA	NA	NA	rs1047004	0.03	0.03	0.026	0.0271565	0.0775	NA	0.0432	0.0083	0.0174	0.07	NA	0.05	0.01	0.0514	0.072	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.095009	NA	NA	0.07186	0.019301	NA	0.116	NA	4.1325734
1239	17	7017420	7017420	G	A	intronic	ASGR2	NA	NA	NA	intronic	ENSG00000161944	NA	NA	NA	NA	NA	17p13.1	NA	NA	Name=3	NA	rs10459916	0.32	0.32	0.314	0.302915	0.2913	0.378	0.3012	0.3585	0.1636	0.29	0.35	0.27	0.37	0.2824	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.442665	NA	NA	0.29407	0.340445	NA	0.254	NA	4.13223
1239	20	44515059	44515059	T	C	downstream	SPATA25	NA	NA	NA	downstream	ENSG00000149634	NA	NA	NA	NA	NA	20q13.12	NA	Name=Pol2	NA	NA	rs6094224	0.44	0.44	0.405	0.389377	0.5348	0.4276	0.6225	0.1513	0.3569	0.56	0.44	0.58	0.16	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.71182	NA	NA	NA	NA	NA	0.42	NA	4.1318666
1239	12	7016449	7016449	C	T	intronic	LRRC23	NA	NA	NA	intronic	ENSG00000010626	NA	NA	NA	NA	NA	12p13.31	Score=809;Name=V$ARP1_01	NA	NA	NA	rs3741921	0.36	0.36	0.35	0.384385	0.2942	0.2569	0.2723	0.6596	0.316	0.29	0.25	0.34	0.63	0.2967	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.083193	3.083193	NA	0.277442	0.565592	NA	0.391	NA	4.131658
1239	19	57642098	57642098	G	A	exonic	USP29	NA	synonymous SNV	USP29:NM_020903:exon4:c.G2055A:p.V685V	exonic	ENSG00000131864	NA	synonymous SNV	ENSG00000131864:ENST00000598197:exon1:c.G2055A:p.V685V,ENSG00000131864:ENST00000254181:exon4:c.G2055A:p.V685V	NA	NA	19q13.43	NA	NA	NA	NA	rs3764574	0.41	0.41	0.388	0.427117	0.5139	0.3611	0.4712	0.289	0.5613	0.49	0.36	0.5	0.27	0.4899	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.29	NA	NA	0.531744	0.327508	NA	0.29	NA	4.1311226
1239	7	147926888	147926888	A	C	ncRNA_intronic	MIR548T	NA	NA	NA	intronic	ENSG00000174469	NA	NA	NA	NA	NA	7q36.1	NA	NA	NA	NA	rs3779032	0.36	0.36	0.356	0.360224	0.4066	0.3085	0.304	0.413	0.3344	0.4	0.29	0.31	0.41	0.3755	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.202102	NA	NA	0.420233	0.409215	NA	0.37	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000081598.1;CLNDSDB=.;CLNDSDBID=.	4.1310003
1239	2	85824468	85824468	C	T	intronic	RNF181	NA	NA	NA	UTR3	ENSG00000168894	ENST00000441634:c.*149C>T	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs2232750	0.16	0.16	0.164	0.139377	0.0358	0.2917	0.0548	0.2095	0.0542	0.04	0.32	0.06	0.25	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.10216	NA	NA	NA	NA	NA	0.094	NA	4.1308667
1239	5	115469773	115469773	C	T	exonic	COMMD10	NA	synonymous SNV	COMMD10:NM_016144:exon5:c.C408T:p.T136T	exonic	ENSG00000145781	NA	nonsynonymous SNV	ENSG00000145781:ENST00000507356:exon5:c.C403T:p.R135C	NA	NA	5q23.1	NA	NA	NA	NA	rs1129496	0.47	0.47	0.454	0.432508	0.6571	0.3839	0.536	0.1415	0.5716	0.66	0.39	0.62	0.16	0.5698	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.013109	4.013109	NA	0.642558	0.226158	ID=COSM149902;OCCURENCE=1(stomach)	0.391	NA	4.130542
1239	11	18741165	18741165	C	T	intronic	IGSF22	NA	NA	NA	ncRNA_intronic	ENSG00000254966	NA	NA	NA	NA	NA	11p15.1	NA	NA	NA	NA	rs12418990	0.22	0.22	0.195	0.200879	0.2028	0.1925	0.3084	0.1914	0.1442	0.22	0.18	0.29	0.22	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.996634	NA	NA	NA	NA	NA	0.188	NA	4.1305333
1239	5	72151858	72151858	T	A	intronic	TNPO1	NA	NA	NA	intronic	ENSG00000083312	NA	NA	NA	NA	NA	5q13.2	NA	NA	Name=18	NA	rs34660	0.83	0.83	0.83	0.803115	0.8698	0.8571	0.8429	0.7375	0.7393	0.88	0.86	0.8	0.74	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.884795	NA	NA	NA	NA	NA	0.768	NA	4.1302
1239	17	25758401	25758401	C	T	ncRNA_exonic	TBC1D3P5	NA	NA	NA	ncRNA_exonic	ENSG00000266433	NA	NA	NA	NA	NA	17q11.1	NA	NA	NA	NA	rs12603363	0.6	0.6	0.563	0.577476	0.5368	0.6835	0.4582	0.6498	0.4969	0.56	0.68	0.47	0.65	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.013802	NA	NA	NA	NA	NA	0.623	NA	4.1298666
1239	7	142495126	142495126	G	A	intergenic	PRSS3P2,EPHB6	dist=12727;dist=57666	NA	NA	upstream;downstream	ENSG00000211771;ENSG00000211765,ENSG00000211766,ENSG00000211767,ENSG00000211768,ENSG00000211769,ENSG00000211770	NA	NA	NA	NA	NA	7q34	NA	Name=Pol2,SUZ12	Name=12	NA	rs12532977	0.29	0.29	0.261	0.270168	0.493	0.1766	0.4135	0.1475	0.2014	0.46	0.15	0.38	0.14	0.3928	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.407295	NA	NA	0.484742	0.195268	NA	NA	NA	4.129458
1239	16	1244877	1244877	G	A	intronic	CACNA1H	NA	NA	NA	intronic	ENSG00000196557	NA	NA	NA	NA	NA	16p13.3	NA	Name=GABP,SMC3_(ab9263),Rad21,CTCF,CTCF_(SC-5916),CTCF_(C-20),ZBTB7A_(SC-34508)	NA	NA	rs9936834	0.85	0.85	0.869	0.84365	0.8708	1	0.8804	0.649	0.8916	0.89	0.99	0.84	0.64	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.092279	NA	NA	NA	NA	NA	0.674	NA	4.1292
1239	X	1428607	1428607	C	T	UTR3	CSF2RA	NM_001161532:c.*235C>T,NM_172249:c.*339C>T,NM_006140:c.*235C>T,NM_001161529:c.*235C>T,NM_172245:c.*235C>T,NM_172246:c.*125C>T,NM_001161530:c.*235C>T,NM_172247:c.*339C>T	NA	NA	UTR3	ENSG00000198223	ENST00000501036:c.*235C>T,ENST00000361536:c.*339C>T,ENST00000432318:c.*235C>T,ENST00000381529:c.*235C>T,ENST00000381524:c.*235C>T,ENST00000355432:c.*125C>T,ENST00000486791:c.*444C>T,ENST00000355805:c.*339C>T,ENST00000417535:c.*235C>T	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs28416688	0.17	0.17	0.14706	NA	NA	NA	NA	NA	NA	0.13	0.37	0.14	0.03	0.2043	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.606524	NA	NA	NA	NA	NA	0.116	NA	4.1290334
1239	6	128312033	128312033	A	G	intronic	PTPRK	NA	NA	NA	intronic	ENSG00000152894	NA	NA	NA	Score=597;Name=lod=357	NA	6q22.33	NA	NA	NA	NA	rs12055782	0.3	0.3	0.273	0.263179	0.2903	0.4454	0.3775	0.0416	0.2658	0.3	0.47	0.36	0.05	0.2965	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.062373	NA	NA	0.284202	0.095141	NA	0.159	NA	4.128998
1239	13	21895046	21895046	T	C	ncRNA_intronic	MIPEPP3	NA	NA	NA	ncRNA_intronic	ENSG00000224429	NA	NA	NA	NA	NA	13q12.11	NA	NA	NA	NA	rs9580081	0.43	0.43	0.413	0.434105	0.5378	0.3264	0.366	0.416	0.5112	0.54	0.33	0.41	0.42	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.758955	NA	NA	NA	NA	NA	0.486	NA	4.1288666
1239	17	25756890	25756890	G	A	ncRNA_exonic	TBC1D3P5	NA	NA	NA	ncRNA_exonic	ENSG00000266433	NA	NA	NA	NA	NA	17q11.1	NA	NA	NA	NA	rs4795660	0.6	0.6	0.629	0.578075	0.5378	0.6835	0.4582	0.6505	0.498	0.56	0.68	0.47	0.66	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.437917	NA	NA	NA	NA	NA	0.623	NA	4.1288666
1239	6	32609057	32609057	G	A	intronic	HLA-DQA1	NA	NA	NA	intronic	ENSG00000196735	NA	NA	NA	NA	NA	6p21.32	NA	Name=Pol2-4H8	NA	NA	rs9272687	0.28	0.28	0.302	0.275958	0.2922	0.2302	0.3357	0.3238	0.1994	0.27	0.22	0.36	0.32	0.2994	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.8952	NA	NA	0.27986	0.31911	NA	0.203	NA	4.12854
1239	10	135351174	135351174	T	A	intronic	CYP2E1	NA	NA	NA	intronic	ENSG00000130649,ENSG00000203772	NA	NA	NA	NA	NA	10q26.3	NA	NA	Name=18	NA	rs2070677	0.72	0.72	0.69	0.692891	0.8718	0.7946	0.8184	0.3101	0.8323	0.88	0.81	0.82	0.32	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.428912	NA	NA	NA	NA	NA	0.739	NA	4.1282
1239	19	966693	966693	C	T	exonic	ARID3A	NA	synonymous SNV	ARID3A:NM_005224:exon7:c.C1320T:p.A440A	exonic	ENSG00000116017	NA	synonymous SNV	ENSG00000116017:ENST00000263620:exon7:c.C1320T:p.A440A	NA	NA	19p13.3	NA	NA	Name=6	NA	rs6510986	0.7	0.7	0.725	0.714856	0.8698	0.5724	0.6066	0.6702	0.8395	0.86	0.54	0.7	0.66	0.7977	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.566649	NA	NA	0.871037	0.712424	NA	0.478	NA	4.1281296
1239	4	48496368	48496368	A	G	UTR3	ZAR1	NM_175619:c.*107A>G	NA	NA	UTR3	ENSG00000182223	ENST00000327939:c.*107A>G	NA	NA	NA	NA	4p11	NA	NA	NA	NA	rs17472127	0.16	0.16	0.159	0.160144	0.2058	0.125	0.111	0.1725	0.1677	0.21	0.1	0.1	0.19	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.095779	NA	NA	NA	NA	NA	0.188	NA	4.1275334
1239	15	62939440	62939440	T	C	upstream	TLN2	NA	NA	NA	intronic	ENSG00000171914	NA	NA	NA	NA	NA	15q22.2	NA	Name=AP-2gamma	NA	NA	rs938979	0.63	0.63	0.632	0.629393	0.7058	0.378	0.6513	0.6876	0.7157	0.7	0.42	0.68	0.72	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.065272	NA	NA	NA	NA	NA	0.609	NA	4.1275333
1239	11	6622714	6622714	G	A	exonic	RRP8	NA	synonymous SNV	RRP8:NM_015324:exon3:c.C582T:p.N194N	exonic	ENSG00000132275	NA	synonymous SNV	ENSG00000132275:ENST00000254605:exon3:c.C582T:p.N194N,ENSG00000132275:ENST00000533907:exon3:c.C582T:p.N194N	Score=489;Name=lod=130	NA	11p15.4	NA	NA	NA	NA	rs2288283	0.76	0.76	0.734	0.739018	0.8598	0.9137	0.7925	0.3911	0.8671	0.86	0.9	0.81	0.43	0.8197	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.478371	NA	NA	0.859637	0.475239	NA	0.746	NA	4.1275296
1239	7	30485741	30485741	A	G	intronic	NOD1	NA	NA	NA	intronic	ENSG00000106100	NA	NA	NA	NA	NA	7p14.3	NA	Name=NFKB,ZEB1_(SC-25388),Rad21,CTCF,WHIP,SMC3_(ab9263),MEF2A,YY1_(C-20)	NA	NA	rs2907749	0.33	0.33	0.334	0.336462	0.2783	0.2212	0.353	0.5257	0.2474	0.27	0.26	0.35	0.5	0.3008	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.117117	NA	NA	0.293372	0.48956	ID=COSN168001;OCCURENCE=1(large_intestine)	0.457	NA	4.127528
1239	5	79095145	79095145	T	G	intronic	CMYA5	NA	NA	NA	ncRNA_intronic	ENSG00000250258	NA	NA	NA	NA	NA	5q14.1	NA	NA	NA	NA	rs3749683	0.08	0.08	0.077	0.0922524	0.0636	0.1111	0.0418	0.143	0.0695	0.06	0.1	0.04	0.13	0.0757	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.815354	NA	NA	0.06665	0.12662	NA	0.094	NA	4.1273833
1239	1	45457873	45457873	G	A	intergenic	EIF2B3,HECTD3	dist=5479;dist=10347	NA	NA	upstream	ENSG00000268949	NA	NA	NA	Score=609;Name=lod=398	NA	1p34.1	NA	NA	NA	NA	rs401665	0.47	0.47	0.46	0.479433	0.3728	0.4395	0.5793	0.6452	0.3354	0.36	0.43	0.5	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.05165	NA	NA	NA	NA	NA	0.507	NA	4.1272
1239	17	73231148	73231148	C	G	intronic	NUP85	NA	NA	NA	UTR3	ENSG00000125450	ENST00000447371:c.*139C>G,ENST00000581104:c.*1400C>G	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs73356305	0.09	0.09	0.08	0.105831	0.002	0.1002	0.0692	0.2209	0.089	0.004	0.06	0.07	0.26	0.0361	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.124345	NA	NA	0.002326	0.168861	NA	0.101	NA	4.1262407
1239	8	98877537	98877537	T	C	intergenic	LAPTM4B,MATN2	dist=12707;dist=3774	NA	NA	ncRNA_exonic	ENSG00000243504	NA	NA	NA	Score=750;Name=lod=1484	NA	8q22.1	NA	NA	NA	NA	rs6468601	0.79	0.79	0.789	0.765775	0.8738	0.6587	0.7637	0.8101	0.7065	0.87	0.63	0.79	0.84	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.560093	NA	NA	NA	NA	NA	0.775	NA	4.1262
1239	18	29543204	29543204	T	C	intergenic	TRAPPC8,RNF125	dist=20113;dist=55241	NA	NA	ncRNA_exonic	ENSG00000265273	NA	NA	NA	Score=640;Name=lod=532	NA	18q12.1	NA	NA	NA	NA	rs6506951	0.84	0.84	0.847	0.839657	0.8738	0.7272	0.9063	0.9221	0.7618	0.87	0.7	0.9	0.92	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.416382	NA	NA	NA	NA	NA	0.877	NA	4.1262
1239	16	84209634	84209634	C	G	exonic	DNAAF1	NA	synonymous SNV	DNAAF1:NM_178452:exon11:c.C1794G:p.L598L	exonic	ENSG00000154099	NA	synonymous SNV	ENSG00000154099:ENST00000569735:exon1:c.C96G:p.L32L,ENSG00000154099:ENST00000378553:exon11:c.C1794G:p.L598L	NA	NA	16q24.1	NA	NA	NA	NA	rs2288019	0.52	0.52	0.529	0.531749	0.504	0.5268	0.5245	0.5159	0.592	0.5	0.55	0.49	0.52	0.528	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.189818	NA	NA	0.508605	0.514773	ID=COSM148129;OCCURENCE=1(stomach)	0.442	NA	4.1260616
1239	6	33641379	33641379	T	C	exonic	ITPR3	NA	synonymous SNV	ITPR3:NM_002224:exon23:c.T2940C:p.N980N	exonic	ENSG00000096433	NA	synonymous SNV	ENSG00000096433:ENST00000605930:exon23:c.T2940C:p.N980N,ENSG00000096433:ENST00000374316:exon24:c.T2940C:p.N980N	NA	NA	6p21.31	NA	NA	NA	NA	rs1803831	0.45	0.45	0.425	0.47504	0.505	0.5268	0.4813	0.3086	0.6115	0.49	0.49	0.45	0.31	0.5105	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.699519	NA	NA	0.525233	0.327281	NA	0.486	NA	4.1259336
1239	17	56440526	56440526	G	A	intronic	RNF43	NA	NA	NA	ncRNA_intronic	ENSG00000265148	NA	NA	NA	NA	NA	17q22	NA	NA	NA	NA	rs2526372	0.11	0.11	0.086	0.0964457	0.2078	NA	0.1225	0.0847	0.0787	0.18	NA	0.15	0.07	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.464995	1.464995	NA	NA	NA	NA	0.21	NA	4.1255333
1239	19	54626055	54626055	C	G	intronic	PRPF31	NA	NA	NA	ncRNA_exonic	ENSG00000237017	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs56220912	0.21	0.21	0.202	0.188299	0.2078	0.1974	0.2075	0.118	0.2403	0.22	0.25	0.22	0.14	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.024145	NA	NA	NA	NA	NA	0.123	NA	4.1255333
1239	5	149602280	149602280	T	C	intronic	CAMK2A	NA	NA	NA	UTR3	ENSG00000011083	ENST00000524041:c.*116T>C	NA	NA	Score=383;Name=lod=48	NA	5q32	NA	NA	NA	NA	rs55976097	0.31	0.31	0.291	0.310903	0.3419	0.1558	0.3862	0.3797	0.2924	0.35	0.16	0.39	0.39	0.3482	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.585894	NA	NA	0.351223	0.354176	ID=COSM149998;OCCURENCE=1(stomach)	0.355	NA	4.1253437
1239	8	63055991	63055991	T	C	intergenic	MIR4470,NKAIN3	dist=428573;dist=105510	NA	NA	ncRNA_exonic	ENSG00000237810	NA	NA	NA	Score=680;Name=lod=776	NA	8q12.3	NA	NA	NA	NA	rs4256587	0.74	0.74	0.723	0.742013	0.8748	0.6478	0.7594	0.6089	0.8701	0.88	0.64	0.8	0.61	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.281519	NA	NA	NA	NA	NA	0.688	NA	4.1252
1239	8	63056052	63056052	A	C	intergenic	MIR4470,NKAIN3	dist=428634;dist=105449	NA	NA	ncRNA_exonic	ENSG00000237810	NA	NA	NA	Score=680;Name=lod=776	NA	8q12.3	NA	NA	NA	NA	rs4445217	0.74	0.74	0.721	0.733626	0.8748	0.6478	0.7565	0.5787	0.8701	0.88	0.64	0.8	0.59	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.342895	NA	NA	NA	NA	NA	0.667	NA	4.1252
1239	13	29174007	29174007	T	C	intergenic	FLT1,POMP	dist=104742;dist=59134	NA	NA	ncRNA_exonic	ENSG00000235472	NA	NA	NA	Score=798;Name=lod=2344	NA	13q12.3	NA	NA	NA	NA	rs7987859	0.82	0.82	0.83	0.786342	0.8748	0.8185	0.7839	0.736	0.7321	0.89	0.82	0.79	0.76	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.010346	NA	NA	NA	NA	NA	0.725	NA	4.1252
1240	9	115924973	115924973	A	G	intronic	SLC31A2	NA	NA	NA	UTR3	ENSG00000119321	ENST00000446284:c.*3385T>C	NA	NA	NA	NA	9q32	NA	NA	NA	NA	rs10817449	0.05	0.05	0.048	0.0794728	0.0417	0.0387	0.0274	0.1135	0.1513	0.04	0.02	0.03	0.12	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.087152	2.087152	NA	NA	NA	NA	0.094	NA	4.1249667
1240	8	134488007	134488007	G	A	exonic	ST3GAL1	NA	synonymous SNV	ST3GAL1:NM_003033:exon4:c.C261T:p.T87T,ST3GAL1:NM_173344:exon5:c.C261T:p.T87T	exonic	ENSG00000008513	NA	synonymous SNV	ENSG00000008513:ENST00000399640:exon2:c.C261T:p.T87T,ENSG00000008513:ENST00000319914:exon4:c.C261T:p.T87T,ENSG00000008513:ENST00000521180:exon4:c.C261T:p.T87T,ENSG00000008513:ENST00000522652:exon5:c.C261T:p.T87T	NA	NA	8q24.22	NA	NA	NA	NA	rs2230542	0.42	0.42	0.443	0.440495	0.501	0.1657	0.4308	0.5893	0.4673	0.5	0.14	0.46	0.58	0.4965	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.791301	NA	NA	0.544884	0.575352	ID=COSM1132840;OCCURENCE=1(prostate)	0.442	NA	4.1242826
1240	3	71247572	71247572	A	T	intronic	FOXP1	NA	NA	NA	intronic	ENSG00000114861	NA	NA	NA	NA	NA	3p13	NA	NA	Name=5	NA	rs56850311	0.26	0.26	0.26	0.26258	0.2893	0.1062	0.2522	0.3964	0.2229	0.26	0.1	0.3	0.4	0.3403	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.832436	NA	NA	0.246247	0.338794	NA	0.275	NA	4.124153
1240	18	673086	673086	A	G	UTR3	ENOSF1,TYMS	NM_202758:c.*1219T>C,NM_017512:c.*1219T>C;NM_001071:c.*89A>G	NA	NA	UTR3	ENSG00000176890	ENST00000323274:c.*89A>G,ENST00000323224:c.*89A>G	NA	NA	NA	NA	18p11.32	NA	NA	NA	NA	rs2790	0.28	0.28	0.286	0.29393	0.2097	0.3909	0.2349	0.2466	0.3865	0.2	0.41	0.2	0.29	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.690108	NA	NA	NA	NA	NA	0.304	NA	4.1236334
1240	1	151789611	151789611	C	T	intronic	RORC	NA	NA	NA	intronic	ENSG00000143365	NA	NA	NA	NA	NA	1q21.3	NA	NA	Name=9	NA	rs55841824	NA	NA	NA	0.785343	0.8767	0.8472	0.634	0.702	0.8476	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.436843	NA	NA	NA	NA	NA	NA	NA	4.1233
1240	6	31249132	31249132	A	T	intergenic	HLA-C,HLA-B	dist=9219;dist=72517	NA	NA	ncRNA_exonic	ENSG00000227939	NA	NA	NA	Score=849;Name=lod=3743	NA	6p21.33	NA	NA	NA	NA	rs9264761	0.87	0.87	0.878	0.889776	0.8767	0.8343	0.9035	0.9493	0.8701	0.87	0.82	0.88	0.94	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.775111	NA	NA	NA	NA	NA	0.862	NA	4.1233
1240	1	24434595	24434595	T	C	intronic	MYOM3	NA	NA	NA	intronic	ENSG00000142661	NA	NA	NA	NA	NA	1p36.11	NA	Name=Pol2,c-Fos	Name=89	NA	rs11249170	0.64	0.64	0.671	0.702676	0.6153	0.6984	0.5778	0.7784	0.7832	0.59	0.69	0.53	0.73	0.6349	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.660037	NA	NA	0.626623	0.751378	NA	0.754	NA	4.123177
1240	15	75979782	75979782	G	T	exonic	CSPG4	NA	synonymous SNV	CSPG4:NM_001897:exon3:c.C3624A:p.R1208R	exonic	ENSG00000173546	NA	synonymous SNV	ENSG00000173546:ENST00000308508:exon3:c.C3624A:p.R1208R	NA	NA	15q24.2	NA	NA	NA	NA	rs8030131	0.38	0.38	0.337	0.384385	0.5189	0.2292	0.5245	0.2716	0.4591	0.52	0.19	0.51	0.28	0.4831	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.354187	NA	NA	0.541579	0.299863	NA	0.391	NA	4.1230876
1240	15	42434254	42434254	G	A	exonic	PLA2G4F	NA	synonymous SNV	PLA2G4F:NM_213600:exon20:c.C2478T:p.N826N	exonic	ENSG00000168907	NA	synonymous SNV	ENSG00000168907:ENST00000382396:exon20:c.C2478T:p.N826N,ENSG00000168907:ENST00000397272:exon20:c.C2484T:p.N828N	NA	NA	15q15.1	NA	NA	NA	NA	rs655427	0.43	0.43	0.432	0.399361	0.5487	0.3452	0.415	0.3964	0.2945	0.55	0.33	0.43	0.36	0.4677	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.040045	NA	NA	0.527565	0.412846	NA	0.507	NA	4.1227016
1240	2	28840691	28840691	C	T	intronic	PLB1	NA	NA	NA	intronic	ENSG00000163803	NA	NA	NA	NA	NA	2p23.2	NA	Name=GATA-2	NA	NA	rs1534478	0.27	0.27	0.271	0.259385	0.3072	0.3304	0.2363	0.1634	0.2832	0.31	0.31	0.22	0.2	0.2824	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.565577	NA	NA	0.287791	0.173854	NA	0.341	NA	4.122609
1240	15	41821752	41821752	T	C	exonic	RPAP1	NA	synonymous SNV	RPAP1:NM_015540:exon9:c.A1074G:p.R358R	exonic	ENSG00000103932	NA	synonymous SNV	ENSG00000103932:ENST00000304330:exon9:c.A1074G:p.R358R,ENSG00000103932:ENST00000561603:exon9:c.A1074G:p.R358R,ENSG00000103932:ENST00000562303:exon9:c.A1074G:p.R358R	NA	NA	15q15.1	NA	NA	NA	NA	rs1200349	0.51	0.51	0.515	0.511382	0.5179	0.3542	0.5692	0.6475	0.4417	0.53	0.34	0.56	0.66	0.5222	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.100084	NA	NA	0.504186	0.633	NA	0.493	NA	4.1223806
1240	1	246490438	246490438	T	C	intronic	SMYD3	NA	NA	NA	intronic	ENSG00000185420	NA	NA	NA	NA	NA	1q44	NA	NA	Name=9	NA	rs3737245	0.82	0.82	0.82	0.816294	0.8777	0.6865	0.7464	0.9334	0.7781	0.87	0.7	0.77	0.92	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.028003	2.028003	NA	NA	NA	NA	0.739	NA	4.1223
1240	1	246490442	246490442	A	G	intronic	SMYD3	NA	NA	NA	intronic	ENSG00000185420	NA	NA	NA	NA	NA	1q44	NA	NA	Name=9	NA	rs3737246	0.82	0.82	0.823	0.816294	0.8777	0.6865	0.7464	0.9334	0.7781	0.87	0.7	0.77	0.92	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.390425	1.390425	NA	NA	NA	NA	0.739	NA	4.1223
1240	18	8069868	8069868	C	T	exonic	PTPRM	NA	synonymous SNV	PTPRM:NM_001105244:exon8:c.C1317T:p.N439N,PTPRM:NM_002845:exon8:c.C1317T:p.N439N	exonic	ENSG00000173482	NA	synonymous SNV	ENSG00000173482:ENST00000444013:exon4:c.C678T:p.N226N,ENSG00000173482:ENST00000332175:exon8:c.C1317T:p.N439N,ENSG00000173482:ENST00000400053:exon8:c.C1131T:p.N377N,ENSG00000173482:ENST00000400060:exon8:c.C1317T:p.N439N,ENSG00000173482:ENST00000580170:exon8:c.C1317T:p.N439N	NA	NA	18p11.23	NA	NA	NA	NA	rs2230601	0.44	0.44	0.435	0.474441	0.5239	0.2946	0.5159	0.5325	0.501	0.52	0.26	0.49	0.51	0.5032	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.716016	NA	NA	0.517558	0.56877	NA	0.514	NA	4.1220086
1240	19	2993427	2993427	T	C	intronic	TLE6	NA	NA	NA	intronic	ENSG00000104953	NA	NA	NA	Score=325;Name=lod=28	NA	19p13.3	NA	NA	NA	NA	rs435806	0.42	0.42	0.425	0.466454	0.2763	0.5278	0.3256	0.6997	0.3834	0.27	0.49	0.31	0.64	0.3356	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.132417	NA	NA	0.266395	0.620517	NA	0.572	NA	4.121705
1240	1	45474008	45474008	T	C	intronic	HECTD3	NA	NA	NA	exonic	ENSG00000126107	NA	synonymous SNV	ENSG00000126107:ENST00000372168:exon1:c.A54G:p.L18L	NA	NA	1p34.1	NA	NA	NA	NA	rs7541207	0.24	0.24	0.221	0.246605	0.2127	0.2897	0.4092	0.1558	0.2444	0.22	0.27	0.34	0.16	0.2571	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.065485	NA	NA	0.242067	0.156803	ID=COSM146496;OCCURENCE=1(stomach)	0.341	NA	4.1214663
1240	3	57132200	57132200	A	G	exonic	IL17RD	NA	synonymous SNV	IL17RD:NM_017563:exon12:c.T1531C:p.L511L	exonic	ENSG00000144730	NA	synonymous SNV	ENSG00000144730:ENST00000296318:exon12:c.T1531C:p.L511L,ENSG00000144730:ENST00000427856:exon12:c.T1459C:p.L487L,ENSG00000144730:ENST00000463523:exon12:c.T1099C:p.L367L,ENSG00000144730:ENST00000320057:exon13:c.T1099C:p.L367L	Score=381;Name=lod=47	NA	3p14.3	NA	NA	NA	NA	rs2291462	0.71	0.71	0.67	0.736222	0.8618	0.5129	0.8501	0.6142	0.9213	0.87	0.52	0.86	0.58	0.8239	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.604746	NA	NA	0.859535	0.657286	NA	0.754	NA	4.1214316
1240	1	111441829	111441829	C	T	UTR3	CD53	NM_001040033:c.*12C>T,NM_000560:c.*12C>T	NA	NA	UTR3	ENSG00000143119	ENST00000429072:c.*12C>T,ENST00000271324:c.*12C>T	NA	NA	NA	NA	1p13.3	NA	Name=SRF	Name=2	NA	rs1803259	0.59	0.59	0.569	0.556709	0.7614	0.501	0.7349	0.3169	0.6012	0.76	0.52	0.7	0.33	0.6871	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.526118	NA	NA	0.763488	0.388334	NA	0.638	NA	4.1213454
1240	7	75442587	75442587	A	G	intronic	CCL24	NA	NA	NA	intronic	ENSG00000106178	NA	NA	NA	NA	NA	7q11.23	NA	NA	Name=15	NA	rs3815261	0.42	0.42	0.363	0.407748	0.2833	0.6895	0.4496	0.3026	0.3579	0.29	0.69	0.4	0.31	0.339	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.180397	NA	NA	0.256628	0.326827	NA	0.442	NA	4.121072
1240	6	5999464	5999464	C	G	intronic	NRN1	NA	NA	NA	intronic	ENSG00000124785	NA	NA	NA	Score=709;Name=lod=1015	NA	6p25.1	NA	NA	Name=48	NA	rs3749860	0.53	0.53	0.54	0.501398	0.6521	0.2827	0.4539	0.6135	0.454	0.66	0.31	0.5	0.62	0.5666	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.346728	NA	NA	0.660233	0.631866	NA	0.688	NA	4.121067
1240	11	33097223	33097223	A	C	upstream	LINC00294	NA	NA	NA	ncRNA_exonic	ENSG00000213713	NA	NA	NA	NA	NA	11p13	NA	NA	NA	NA	rs61889303	0.02	0.02	0.015	0.014976	0.0457	NA	0.0274	0.0015	0.0082	0.04	NA	0.02	0.002	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.524665	NA	NA	NA	NA	NA	0.109	NA	4.1209666
1240	8	125107207	125107207	C	T	exonic	FER1L6	NA	synonymous SNV	FER1L6:NM_001039112:exon35:c.C4623T:p.V1541V	exonic	ENSG00000214814	NA	synonymous SNV	ENSG00000214814:ENST00000399018:exon34:c.C4623T:p.V1541V,ENSG00000214814:ENST00000522917:exon35:c.C4623T:p.V1541V	Score=531;Name=lod=191	NA	8q24.13	NA	NA	NA	NA	rs6470220	0.77	0.77	0.779	0.759585	0.8728	0.6627	0.7003	0.733	0.8211	0.86	0.7	0.72	0.75	0.8116	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.508346	NA	NA	0.86136	0.760597	NA	0.87	NA	4.1209066
1240	13	27239161	27239161	A	G	intronic	WASF3	NA	NA	NA	intronic	ENSG00000132970	NA	NA	NA	NA	NA	13q12.13	NA	Name=Pol2	NA	NA	rs977351	0.24	0.24	0.234	0.271366	0.2982	0.1091	0.2392	0.2859	0.4141	0.31	0.1	0.24	0.3	0.2829	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.165782	NA	NA	0.29814	0.298911	NA	0.275	NA	4.12076
1240	4	8605684	8605684	C	A	intronic	CPZ	NA	NA	NA	UTR5	ENSG00000109625	ENST00000429646:c.-7262C>A	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs116765715	0.02	0.02	0.011	0.0289537	0.0159	0.002	0.0144	0.0492	0.0532	0.01	NA	0.01	0.03	0.0187	0.049	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.330313	NA	NA	0.011372	0.048706	NA	0.036	NA	4.1206947
1240	11	125618731	125618731	T	C	UTR3	PATE1	NM_138294:c.*103T>C	NA	NA	UTR3	ENSG00000171053	ENST00000305738:c.*103T>C,ENST00000437148:c.*103T>C	NA	NA	NA	NA	11q24.2	NA	NA	NA	NA	rs7939499	NA	NA	0.463	0.301717	0.2127	0.3968	0.1484	0.3971	0.2751	NA	NA	NA	NA	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.243453	NA	NA	NA	NA	NA	0.196	NA	4.1206334
1240	21	45971357	45971357	A	C	UTR5	KRTAP10-2	NM_198693:c.-16T>G	NA	NA	UTR5	ENSG00000205445	ENST00000391621:c.-16T>G	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs456478	0.03	0.03	NA	0.0329473	0.0716	0.001	0.0576	0.0106	0.0389	0.06	NA	0.05	0.01	0.0595	0.082	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.644722	1.644722	NA	0.081628	0.014299	NA	0.022	NA	4.1206054
1240	7	75612803	75612803	C	T	intronic	POR	NA	NA	NA	intronic	ENSG00000127948	NA	NA	NA	NA	NA	7q11.23	NA	Name=TCF4	NA	NA	rs41301394	0.28	0.28	0.241	0.27496	0.2932	0.3681	0.2709	0.1377	0.3487	0.3	0.39	0.28	0.12	0.3013	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.178304	NA	NA	0.285061	0.153343	ID=COSN168117;OCCURENCE=1(large_intestine)	0.261	NA	4.120439
1240	1	194158916	194158916	A	G	intergenic	CDC73,KCNT2	dist=934974;dist=2035997	NA	NA	ncRNA_exonic	ENSG00000233057	NA	NA	NA	Score=859;Name=lod=4125	NA	1q31.3	NA	NA	NA	NA	rs1982793	0.87	0.87	0.863	0.86242	0.8797	0.998	0.8818	0.6967	0.9151	0.87	1	0.86	0.73	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.137744	NA	NA	NA	NA	NA	0.87	NA	4.1203
1240	12	63397682	63397682	A	G	intergenic	PPM1H,AVPR1A	dist=69017;dist=138857	NA	NA	ncRNA_exonic	ENSG00000250517	NA	NA	NA	Score=576;Name=lod=292	NA	12q14.2	NA	NA	NA	NA	rs1250159	0.82	0.82	0.803	0.820487	0.8797	0.9137	0.7349	0.6959	0.8926	0.88	0.88	0.75	0.7	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.012247	NA	NA	NA	NA	NA	0.841	NA	4.1203
1240	14	95080659	95080659	G	A	intronic	SERPINA3	NA	NA	NA	UTR5	ENSG00000196136	ENST00000467132:c.-120G>A	NA	NA	NA	NA	14q32.13	NA	NA	NA	NA	rs71431651	0.02	0.02	0.023	0.0217652	0.0467	0.001	0.0202	0.0015	0.046	0.05	NA	0.02	0.0041	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.009674	NA	NA	NA	NA	NA	0.014	NA	4.1199667
1240	18	28723832	28723832	G	A	intronic	DSC1	NA	NA	NA	ncRNA_intronic	ENSG00000265888	NA	NA	NA	NA	NA	18q12.1	NA	NA	NA	NA	rs12454773	0.36	0.36	0.352	0.334665	0.2137	0.5685	0.3703	0.3699	0.1452	0.2	0.58	0.35	0.37	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.959856	NA	NA	NA	NA	NA	0.268	NA	4.1196333
1240	18	28723835	28723835	C	T	intronic	DSC1	NA	NA	NA	ncRNA_intronic	ENSG00000265888	NA	NA	NA	NA	NA	18q12.1	NA	NA	NA	NA	rs12454734	0.37	0.37	0.36	0.345647	0.2137	0.5685	0.3746	0.4092	0.1452	0.2	0.58	0.35	0.41	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.208587	NA	NA	NA	NA	NA	0.268	NA	4.1196333
1240	9	36643131	36643131	A	G	intronic	MELK	NA	NA	NA	intronic	ENSG00000165304	NA	NA	NA	NA	NA	9p13.2	NA	Name=CEBPB	NA	NA	rs9298970	0.34	0.34	0.287	0.370208	0.2932	0.2351	0.3012	0.5953	0.3333	0.3	0.22	0.3	0.58	0.3108	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.688867	NA	NA	0.276408	0.54108	NA	0.449	NA	4.119592
1240	1	167023426	167023426	C	T	UTR3	GPA33	NM_005814:c.*145G>A	NA	NA	ncRNA_UTR3	ENSG00000143167	NA	NA	NA	NA	NA	1q24.1	NA	NA	NA	NA	rs3820388	0.4	0.4	0.356	0.407548	0.3807	0.4554	0.5663	0.1823	0.5777	0.39	0.52	0.52	0.18	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.152758	NA	NA	NA	NA	NA	0.29	NA	4.1193
1240	14	106926311	106926311	T	G	intergenic	LINC00226,LINC00221	dist=181345;dist=12144	NA	NA	exonic	ENSG00000232216	NA	synonymous SNV	ENSG00000232216:ENST00000434710:exon2:c.A231C:p.T77T	NA	NA	14q32.33	NA	NA	NA	NA	rs4977158	0.17	0.17	0.155	0.204872	0.1103	0.1647	0.1354	0.2693	0.3057	0.12	0.17	0.12	0.27	0.1603	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.436206	NA	NA	0.110319	0.19514	NA	0.159	NA	4.119081
1240	7	47913615	47913615	G	A	intronic	PKD1L1	NA	NA	NA	intronic	ENSG00000136273,ENSG00000158683	NA	NA	NA	NA	NA	7p12.3	NA	NA	Name=67	NA	rs17131867	0.27	0.27	0.271	0.304313	0.2932	0.0962	0.3357	0.4455	0.317	0.29	0.08	0.33	0.43	0.3043	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.960219	NA	NA	0.283837	0.416704	NA	0.275	NA	4.118663
1240	9	2717676	2717676	T	G	UTR5	KCNV2	NM_133497:c.-64T>G	NA	NA	UTR5	ENSG00000168263	ENST00000382082:c.-64T>G	NA	NA	NA	NA	9p24.2	NA	NA	NA	NA	rs11793555	0.19	0.19	0.184	0.197284	0.2147	0.2411	0.1354	0.0582	0.3661	0.22	0.26	0.15	0.07	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.12283	2.12283	NA	NA	NA	NA	0.152	NA	4.1186334
1240	13	46937193	46937193	T	C	intronic	KIAA0226L	NA	NA	NA	ncRNA_intronic	ENSG00000241353	NA	NA	NA	NA	NA	13q14.13	NA	NA	NA	NA	rs259699	0.41	0.41	0.43	0.388578	0.2147	0.5863	0.3473	0.5212	0.2137	0.2	0.59	0.35	0.56	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.781109	NA	NA	NA	NA	NA	0.304	NA	4.1186333
1240	5	173380347	173380347	G	A	intronic	CPEB4	NA	NA	NA	UTR3	ENSG00000113742	ENST00000519835:c.*39G>A	NA	NA	NA	NA	5q35.2	NA	NA	NA	NA	rs12153678	0.02	0.02	0.012	0.00978435	0.0288	NA	0.0202	0.003	0.002	0.03	NA	0.02	0.0041	0.0195	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.494716	NA	NA	NA	NA	NA	0.007	NA	4.1183667
1240	1	101722147	101722147	G	T	intergenic	S1PR1,RNU6-31P	dist=15071;dist=84278	NA	NA	ncRNA_exonic	ENSG00000228399	NA	NA	NA	Score=710;Name=lod=1021	NA	1p21.2	NA	NA	NA	NA	rs9433754	0.81	0.81	0.785	0.791933	0.8817	0.6994	0.9078	0.7421	0.7802	0.89	0.69	0.9	0.75	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.390103	2.390103	NA	NA	NA	NA	0.703	NA	4.1183
1240	19	6593602	6593602	C	T	intergenic	CD70,TNFSF14	dist=2439;dist=69546	NA	NA	ncRNA_exonic	ENSG00000268785	NA	NA	NA	Score=767;Name=lod=1753	NA	19p13.3	NA	NA	NA	NA	rs344595	0.93	0.93	0.928	0.925519	0.8817	0.9355	0.9409	0.9887	0.864	0.89	0.92	0.93	0.99	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.386241	NA	NA	NA	NA	NA	0.92	NA	4.1183
1240	12	121789927	121789927	C	A	intronic	ANAPC5	NA	NA	NA	intronic	ENSG00000089053	NA	NA	NA	NA	NA	12q24.31	NA	Name=ZBTB7A_(SC-34508),c-Myc,HA-E2F1,Sin3Ak-20,CTCF,TAF1,BCLAF1_(M33-P5B11),Pol2	Name=10	NA	rs1799525	0.52	0.52	0.481	0.486422	0.6481	0.6131	0.5893	0.1233	0.6074	0.66	0.63	0.6	0.13	0.6047	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.728123	1.728123	NA	0.629013	0.208636	NA	0.594	NA	4.118187
1240	8	27690557	27690557	A	C	intronic	PBK	NA	NA	NA	splicing	ENSG00000168078	ENST00000521226:exon3:c.72+2T>G	NA	NA	NA	NA	8p21.1	NA	NA	NA	NA	rs10113621	0.2	0.2	0.21	0.222843	0.1064	0.3611	0.1066	0.2837	0.2004	0.09	0.36	0.12	0.26	0.1742	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.385518	NA	NA	0.101419	0.247727	NA	0.246	NA	4.117981
1240	7	107188719	107188719	G	T	intronic	COG5	NA	NA	NA	intronic	ENSG00000164597	NA	NA	NA	Score=594;Name=lod=347	NA	7q22.3	NA	NA	NA	NA	rs2066735	0.28	0.28	0.262	0.248802	0.3211	0.3145	0.2954	0.1884	0.1554	0.33	0.29	0.28	0.18	0.2651	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.302681	1.302681	NA	0.296047	0.20631	NA	0.283	NA	4.117753
1240	13	113536132	113536132	T	C	exonic	ATP11A	NA	synonymous SNV	ATP11A:NM_032189:exon29:c.T3330C:p.N1110N	exonic	ENSG00000068650	NA	synonymous SNV	ENSG00000068650:ENST00000419631:exon4:c.T306C:p.N102N,ENSG00000068650:ENST00000375630:exon29:c.T3330C:p.N1110N	NA	NA	13q34	NA	NA	NA	NA	rs1290177	0.54	0.54	0.558	0.564896	0.497	0.6359	0.5101	0.5802	0.5798	0.51	0.6	0.55	0.51	0.5311	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.58569	NA	NA	0.52093	0.571947	NA	0.543	NA	4.1176366
1240	6	151256134	151256134	A	G	intronic	MTHFD1L	NA	NA	NA	ncRNA_exonic	ENSG00000218996	NA	NA	NA	NA	NA	6q25.1	NA	NA	NA	NA	rs60471999	0.17	0.17	0.173	0.179712	0.2157	0.0308	0.1369	0.2496	0.2321	0.22	0.02	0.14	0.28	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.298185	1.298185	NA	NA	NA	NA	0.203	NA	4.1176333
1240	17	12905574	12905574	T	A	intronic	ELAC2	NA	NA	NA	intronic	ENSG00000006744	NA	NA	NA	NA	NA	17p12	NA	NA	Name=36	NA	rs55674356	0.2	0.2	0.193	0.20627	0.3151	0.0347	0.2406	0.2042	0.2495	0.33	0.03	0.23	0.18	0.2706	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.002652	NA	NA	0.296977	0.216296	NA	0.188	NA	4.117323
1240	12	6569983	6569983	C	T	intronic	TAPBPL	NA	NA	NA	intronic	ENSG00000139192	NA	NA	NA	NA	NA	12p13.31	NA	Name=Pol2,Pol2-4H8	NA	NA	rs2243977	0.24	0.24	0.227	0.233027	0.3042	0.3254	0.1715	0.0877	0.3047	0.29	0.33	0.17	0.1	0.2742	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.552268	NA	NA	0.304535	0.119383	NA	0.188	NA	4.117065
1240	2	8178798	8178798	C	T	ncRNA_intronic	LINC00299	NA	NA	NA	ncRNA_intronic	ENSG00000235665,ENSG00000236790	NA	NA	NA	NA	NA	2p25.1	NA	NA	NA	NA	rs62104935	0.39	0.39	0.376	0.380192	0.5497	0.2808	0.5115	0.1974	0.4622	0.53	0.25	0.52	0.23	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.521517	NA	NA	NA	NA	NA	0.355	NA	4.1169666
1240	5	7302041	7302041	A	G	ncRNA_exonic	LOC442132	NA	NA	NA	ncRNA_intronic	ENSG00000205976	NA	NA	NA	NA	NA	5p15.31	NA	NA	NA	NA	rs55745554	0.68	0.68	0.614	0.682708	0.5497	0.8333	0.6916	0.7231	0.6033	0.53	0.83	0.68	0.73	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.536768	NA	NA	NA	NA	NA	0.5	NA	4.1169666
1240	12	51754629	51754629	A	G	intronic	GALNT6	NA	NA	NA	intronic	ENSG00000139629	NA	NA	NA	Score=696;Name=lod=900	NA	12q13.13	NA	NA	NA	NA	rs2241545	0.37	0.37	0.332	0.378794	0.2833	0.6925	0.3963	0.0779	0.5481	0.28	0.72	0.36	0.09	0.346	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.189212	2.189212	NA	0.253837	0.11212	NA	0.268	NA	4.116863
1240	19	51955632	51955632	A	T	UTR3	SIGLEC8	NM_014442:c.*1T>A	NA	NA	UTR3	ENSG00000105366	ENST00000430817:c.*1T>A,ENST00000321424:c.*1T>A,ENST00000340550:c.*1T>A	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs28379613	0.17	0.17	0.175	0.176118	0.0646	0.1091	0.1124	0.4198	0.0757	0.07	0.1	0.12	0.43	0.0976	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.196215	NA	NA	0.054884	0.382433	ID=COSN165892;OCCURENCE=1(breast)	0.174	NA	4.1162494
1240	11	111338328	111338328	A	G	UTR3	BTG4	NM_017589:c.*69T>C	NA	NA	UTR3	ENSG00000137707	ENST00000356018:c.*69T>C	NA	NA	NA	NA	11q23.1	NA	NA	NA	NA	rs12803406	0.05	0.05	0.046	0.0345447	0.1014	0.002	0.062	0.0106	0.0123	0.1	NA	0.06	0.01	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.796275	NA	NA	0.115965	0.021676	NA	0.051	NA	4.1159684
1240	6	30036269	30036269	A	G	intronic	PPP1R11	NA	NA	NA	UTR5	ENSG00000204619	ENST00000376758:c.-185A>G	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs9261286	0.05	0.05	0.05	0.0413339	0.0507	0.0357	0.0403	0.0499	0.0266	0.05	0.04	0.04	0.05	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.554645	1.554645	NA	NA	NA	NA	0.029	NA	4.1159667
1240	1	233785716	233785716	T	G	intronic	KCNK1	NA	NA	NA	exonic	ENSG00000135750	NA	synonymous SNV	ENSG00000135750:ENST00000446915:exon1:c.T30G:p.V10V	NA	NA	1q42.2	NA	NA	NA	NA	rs17814096	0.17	0.17	0.153	0.167332	0.2505	0.1538	0.1931	0.1014	0.1667	0.26	0.11	0.19	0.1	0.217	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.097015	NA	NA	0.250126	0.128425	NA	0.167	NA	4.1157073
1240	6	30121605	30121605	T	C	UTR3	TRIM10	NM_006778:c.*141A>G	NA	NA	UTR3	ENSG00000204613	ENST00000449742:c.*141A>G	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs3734840	0.21	0.21	0.19	0.205471	0.2177	0.4048	0.1427	0.025	0.2761	0.23	0.38	0.18	0.03	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.71123	NA	NA	NA	NA	NA	0.29	NA	4.1156334
1240	14	81449690	81449690	C	G	intronic	TSHR	NA	NA	NA	ncRNA_exonic	ENSG00000258915	NA	NA	NA	NA	NA	14q31.1	NA	NA	NA	NA	rs3783945	0.19	0.19	0.172	0.164137	0.2177	0.1706	0.3012	0.0212	0.1984	0.22	0.21	0.28	0.04	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.198103	NA	NA	NA	NA	NA	0.254	NA	4.1156333
1240	15	25332965	25332965	T	C	upstream;downstream	SNORD116-21;SNORD116-20	NA	NA	NA	ncRNA_exonic	ENSG00000261069	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs3825770	0.06	0.06	0.061	0.091254	0.0159	0.0863	0.0346	0.2224	0.0368	0.02	0.03	0.03	0.2	0.0356	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.91342	NA	NA	NA	NA	NA	0.058	NA	4.1151666
1240	1	19483209	19483209	A	G	intronic	UBR4	NA	NA	NA	intronic	ENSG00000127481	NA	NA	NA	NA	NA	1p36.13	NA	NA	Name=61	NA	rs10799710	0.57	0.57	0.536	0.565695	0.4414	0.7986	0.5605	0.5189	0.5204	0.44	0.81	0.51	0.53	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.220213	NA	NA	0.443496	0.525114	NA	0.529	NA	4.115104
1240	7	157926349	157926349	T	G	intronic	PTPRN2	NA	NA	NA	intronic	ENSG00000155093	NA	NA	NA	NA	NA	7q36.3	NA	Name=CTCF,Rad21,CTCF_(SC-5916)	NA	NA	rs17847428	0.31	0.31	0.267	0.339657	0.2992	0.1825	0.2954	0.444	0.4335	0.3	0.18	0.33	0.46	0.3001	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.299594	NA	NA	0.285664	0.397139	NA	0.333	NA	4.115036
1241	9	90502819	90502819	T	C	exonic	SPATA31E1	NA	synonymous SNV	SPATA31E1:NM_178828:exon4:c.T3417C:p.T1139T	exonic	ENSG00000177992	NA	synonymous SNV	ENSG00000177992:ENST00000325643:exon4:c.T3417C:p.T1139T	NA	NA	9q22.1	NA	NA	NA	NA	rs10868671	0.57	0.57	0.526	0.575879	0.5328	0.5556	0.5533	0.6611	0.5419	0.53	0.55	0.55	0.65	0.5171	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.089839	NA	NA	0.501977	0.616432	NA	0.543	NA	4.1147896
1241	6	76596728	76596728	C	T	intronic	MYO6	NA	NA	NA	intronic	ENSG00000196586	NA	NA	NA	NA	NA	6q14.1	NA	NA	NA	NA	rs2295936	0.16	0.16	0.138	0.147764	0.2992	0.0516	0.1816	0.0091	0.2546	0.3	0.05	0.22	0.01	0.2512	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.176479	NA	NA	0.334884	0.058557	NA	0.138	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000038296.1;CLNDSDB=.;CLNDSDBID=.	4.114716
1241	12	6567787	6567787	T	C	intronic	TAPBPL	NA	NA	NA	intronic	ENSG00000139192	NA	NA	NA	NA	NA	12p13.31	NA	Name=Pol2	NA	NA	rs2243750	0.24	0.24	0.223	0.233427	0.3052	0.3254	0.1715	0.0885	0.3047	0.3	0.33	0.17	0.1	0.2755	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.884688	NA	NA	0.304651	0.11961	NA	0.196	NA	4.114649
1241	4	190584857	190584857	A	G	intergenic	LOC401164,FRG1	dist=1061795;dist=277117	NA	NA	intergenic	ENSG00000250739,ENSG00000202215	dist=2217;dist=45836	NA	NA	NA	NA	4q35.2	NA	NA	Name=2	NA	rs2879008	NA	NA	NA	0.166334	0.2187	0.004	0.1671	0.2579	0.1554	NA	NA	NA	NA	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.298277	NA	NA	NA	NA	NA	0.572	NA	4.1146334
1241	20	3233142	3233142	C	G	UTR3	C20orf194	NM_001009984:c.*76G>C	NA	NA	UTR3	ENSG00000088854	ENST00000252032:c.*76G>C,ENST00000453730:c.*1247G>C	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs6037516	0.24	0.24	0.258	0.23722	0.2187	0.1637	0.1873	0.3767	0.1789	0.22	0.19	0.15	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.645488	NA	NA	NA	NA	NA	0.29	NA	4.1146334
1241	3	37818805	37818805	G	C	intronic	ITGA9	NA	NA	NA	ncRNA_intronic	ENSG00000235257	NA	NA	NA	NA	NA	3p22.2	NA	NA	NA	NA	rs2276003	0.29	0.29	0.313	0.257788	0.2187	0.371	0.147	0.385	0.0879	0.21	0.35	0.18	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.674337	NA	NA	NA	NA	NA	0.362	NA	4.1146333
1241	15	101562793	101562793	G	A	exonic	LRRK1	NA	synonymous SNV	LRRK1:NM_024652:exon15:c.G2058A:p.S686S	exonic	ENSG00000154237	NA	synonymous SNV	ENSG00000154237:ENST00000525284:exon14:c.G2058A:p.S686S,ENSG00000154237:ENST00000388948:exon15:c.G2058A:p.S686S,ENSG00000154237:ENST00000284395:exon16:c.G2049A:p.S683S	NA	NA	15q26.3	Score=811;Name=V$PPARG_03	NA	NA	NA	rs11247253	0.76	0.76	0.726	0.730631	0.8668	0.8194	0.8718	0.3752	0.8793	0.87	0.86	0.86	0.41	0.8375	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.831991	NA	NA	0.848361	0.453807	NA	0.725	NA	4.1140056
1241	1	205063949	205063949	C	T	intronic	RBBP5	NA	NA	NA	intronic	ENSG00000117222	NA	NA	NA	Score=503;Name=lod=147	NA	1q32.1	NA	NA	NA	NA	rs3738154	0.3	0.3	0.311	0.285543	0.4533	0.0903	0.2752	0.3548	0.228	0.43	0.1	0.35	0.33	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.457715	2.457715	NA	0.432697	0.364155	NA	0.493	NA	4.114003
1241	1	19401405	19401405	G	A	intronic	UBR4	NA	NA	NA	ncRNA_exonic	ENSG00000272084	NA	NA	NA	NA	NA	1p36.13	NA	NA	Name=28	NA	rs2281748	0.41	0.41	0.368	0.387181	0.4145	0.6101	0.4597	0.177	0.362	0.41	0.62	0.42	0.17	0.4093	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.42869	NA	NA	0.395814	0.217431	NA	0.384	NA	4.1137193
1241	3	121350593	121350593	C	A	UTR3	HCLS1	NM_005335:c.*100G>T	NA	NA	UTR3	ENSG00000180353	ENST00000314583:c.*100G>T,ENST00000428394:c.*100G>T	NA	NA	NA	NA	3q13.33	NA	NA	NA	NA	rs1128158	0.23	0.23	0.237	0.232827	0.2197	0.2827	0.1772	0.1838	0.3006	0.22	0.31	0.19	0.16	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.15417	NA	NA	NA	NA	NA	0.21	NA	4.1136334
1241	3	121350616	121350616	G	T	UTR3	HCLS1	NM_005335:c.*77C>A	NA	NA	UTR3	ENSG00000180353	ENST00000314583:c.*77C>A,ENST00000428394:c.*77C>A	NA	NA	NA	NA	3q13.33	NA	NA	NA	NA	rs1128154	0.23	0.23	0.235	0.233427	0.2197	0.2827	0.1772	0.1853	0.3016	0.22	0.31	0.19	0.17	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.269768	NA	NA	NA	NA	NA	0.21	NA	4.1136334
1241	6	5609536	5609536	A	T	intronic	FARS2	NA	NA	NA	ncRNA_exonic	ENSG00000218574	NA	NA	NA	NA	NA	6p25.1	NA	NA	NA	NA	rs72819912	0.23	0.23	0.217	0.251398	0.2197	0.2371	0.2147	0.3162	0.2372	0.22	0.2	0.22	0.28	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.371318	NA	NA	NA	NA	NA	0.341	NA	4.1136333
1241	5	72184098	72184098	C	T	exonic	TNPO1	NA	synonymous SNV	TNPO1:NM_002270:exon13:c.C1497T:p.D499D,TNPO1:NM_153188:exon13:c.C1473T:p.D491D	exonic	ENSG00000083312	NA	synonymous SNV	ENSG00000083312:ENST00000454282:exon12:c.C1347T:p.D449D,ENSG00000083312:ENST00000523768:exon12:c.C1347T:p.D449D,ENSG00000083312:ENST00000337273:exon13:c.C1497T:p.D499D,ENSG00000083312:ENST00000506351:exon13:c.C1473T:p.D491D	Score=763;Name=lod=1679	NA	5q13.2	NA	NA	NA	NA	rs17606	0.83	0.83	0.831	0.804513	0.8688	0.8562	0.8444	0.7436	0.7393	0.88	0.86	0.8	0.74	0.8318	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.012665	NA	NA	0.852558	0.75488	NA	0.768	NA	4.1135086
1241	6	37263340	37263340	G	A	intronic	TBC1D22B	NA	NA	NA	intronic	ENSG00000065491	NA	NA	NA	Score=497;Name=lod=139	NA	6p21.2	NA	NA	NA	NA	rs195761	0.92	0.92	0.94	0.924321	0.8867	0.9008	0.9121	0.9924	0.9039	0.89	0.92	0.9	0.98	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.040761	NA	NA	NA	NA	NA	0.935	NA	4.1133
1241	10	5249111	5249111	T	C	intronic	AKR1C4	NA	NA	NA	intronic	ENSG00000198610	NA	NA	NA	Score=378;Name=lod=46	NA	10p15.1	NA	NA	NA	NA	rs4881412	0.81	0.81	0.78	0.791134	0.8867	0.9871	0.8862	0.4508	0.8834	0.89	0.99	0.88	0.44	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.150918	NA	NA	NA	NA	NA	0.717	NA	4.1133
1241	18	48960062	48960062	T	G	ncRNA_intronic	LOC100287225	NA	NA	NA	ncRNA_exonic	ENSG00000266003	NA	NA	NA	NA	NA	18q21.2	NA	NA	NA	NA	rs321845	0.61	0.61	0.589	0.599042	0.5537	0.7321	0.6801	0.4236	0.6881	0.58	0.75	0.63	0.47	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.328652	NA	NA	NA	NA	NA	0.471	NA	4.1129666
1241	10	94659455	94659455	A	G	intronic	EXOC6	NA	NA	NA	UTR3	ENSG00000138190	ENST00000371543:c.*50A>G	NA	NA	NA	NA	10q23.33	NA	NA	NA	NA	rs61862266	0.02	0.02	0.028	0.0205671	0.0199	NA	0.0187	0.0439	0.0123	0.02	NA	0.02	0.05	0.0168	0.054	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.05537	NA	NA	0.017003	0.047688	NA	0.036	NA	4.1129637
1241	7	74105196	74105196	C	T	intronic	GTF2I	NA	NA	NA	ncRNA_intronic	ENSG00000232729	NA	NA	NA	NA	NA	7q11.23	NA	NA	NA	NA	rs35203738	0.15	0.15	0.142	0.152356	0.2207	0.0625	0.1628	0.1293	0.1984	0.22	0.05	0.17	0.13	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.57546	NA	NA	NA	NA	NA	0.145	NA	4.1126333
1241	7	74114847	74114847	T	C	intronic	GTF2I	NA	NA	NA	ncRNA_intronic	ENSG00000160828,ENSG00000232729	NA	NA	NA	NA	NA	7q11.23	NA	NA	NA	NA	rs2301907	0.16	0.16	0.145	0.161142	0.2207	0.0635	0.1657	0.1604	0.1984	0.22	0.05	0.18	0.17	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.283078	NA	NA	NA	NA	NA	0.174	NA	4.1126333
1241	9	43400052	43400052	A	G	intergenic	LOC642929,SPATA31A6	dist=254568;dist=224450	NA	NA	ncRNA_exonic	ENSG00000229489	NA	NA	NA	Score=856;Name=lod=4027	NA	9p12	NA	NA	NA	NA	rs2928515	0.84	0.84	0.826	0.846246	0.8877	0.9306	0.9251	0.652	0.9233	0.88	0.92	0.92	0.65	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.90394	NA	NA	NA	NA	NA	0.007	NA	4.1123
1241	17	25753033	25753033	T	C	ncRNA_exonic	TBC1D3P5	NA	NA	NA	ncRNA_exonic	ENSG00000266433	NA	NA	NA	NA	NA	17q11.1	NA	NA	NA	NA	rs13341669	0.55	0.55	0.541	0.582668	0.5547	0.6845	0.4669	0.6505	0.4969	0.53	0.63	0.45	0.57	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.23351	NA	NA	NA	NA	ID=COSN165371;OCCURENCE=1(breast)	0.601	NA	4.1119666
1241	8	99114970	99114970	A	C	UTR3	HRSP12	NM_005836:c.*100T>G	NA	NA	UTR3	ENSG00000132541	ENST00000254878:c.*100T>G,ENST00000522791:c.*347T>G,ENST00000520507:c.*100T>G,ENST00000521560:c.*100T>G	NA	NA	NA	NA	8q22.2	NA	NA	NA	NA	rs8218	0.15	0.15	0.129	0.163139	0.2217	0.0417	0.2464	0.1165	0.2321	0.22	0.03	0.22	0.13	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.361319	NA	NA	NA	NA	NA	0.13	NA	4.1116334
1241	20	57246484	57246484	G	A	ncRNA_intronic	STX16-NPEPL1	NA	NA	NA	intronic	ENSG00000124222,ENSG00000254995	NA	NA	NA	NA	NA	20q13.32	NA	NA	NA	NA	rs34865822	NA	NA	NA	0.178315	0.2217	0.1171	0.1628	0.1838	0.2004	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.294126	NA	NA	NA	NA	NA	0.007	NA	4.1116333
1241	4	74804846	74804846	C	G	intergenic	CXCL1,PF4	dist=67827;dist=41696	NA	NA	ncRNA_exonic	ENSG00000249920	NA	NA	NA	Score=597;Name=lod=356	NA	4q13.3	NA	NA	NA	NA	rs1821623	0.83	0.83	0.798	0.780751	0.8887	0.9782	0.8876	0.4788	0.7986	0.89	0.98	0.89	0.5	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.207437	NA	NA	NA	NA	NA	0.725	NA	4.1113
1241	19	48845777	48845777	G	A	intronic	TMEM143	NA	NA	NA	intronic	ENSG00000161558	NA	NA	NA	NA	NA	19q13.33	NA	NA	Name=3	NA	rs4275952	0.18	0.18	0.134	0.151957	0.2823	0.1409	0.2248	0.0303	0.1421	0.27	0.15	0.27	0.03	0.3125	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.375944	NA	NA	0.294481	0.071071	NA	0.188	NA	4.110719
1241	22	23632513	23632513	A	G	intronic	BCR	NA	NA	NA	intronic	ENSG00000186716	NA	NA	NA	NA	NA	22q11.23	NA	Name=ZNF263	NA	NA	rs16802	0.3	0.3	0.313	0.311302	0.3012	0.0744	0.3228	0.5393	0.2495	0.3	0.08	0.31	0.55	0.2901	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.324459	1.324459	NA	0.298023	0.509305	NA	0.29	NA	4.110677
1241	7	128142033	128142033	T	C	UTR3	METTL2B	NM_018396:c.*63T>C	NA	NA	UTR3	ENSG00000165055	ENST00000262432:c.*63T>C,ENST00000480046:c.*63T>C	NA	NA	NA	NA	7q32.1	NA	NA	NA	NA	rs35586323	0.12	0.12	0.105	0.110224	0.2227	0.0496	0.1729	0.0182	0.137	0.21	0.04	0.2	0.03	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.226133	NA	NA	NA	NA	NA	0.109	NA	4.1106334
1241	14	25102056	25102056	G	C	intronic	GZMB	NA	NA	NA	ncRNA_intronic	ENSG00000258657	NA	NA	NA	NA	NA	14q12	NA	NA	NA	NA	rs9671454	0.19	0.19	0.183	0.209864	0.2227	0.1935	0.1657	0.2027	0.2546	0.22	0.16	0.17	0.17	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.180384	NA	NA	NA	NA	NA	0.21	NA	4.1106333
1241	15	25332934	25332934	G	A	downstream	SNORD116-20	NA	NA	NA	ncRNA_exonic	ENSG00000261069	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs112202902	0.02	0.02	0.014	0.0233626	0.0159	NA	0.0101	0.0454	0.0348	0.02	NA	0.01	0.03	0.0233	0.042	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.141136	NA	NA	0.017579	0.041667	NA	NA	NA	4.1098876
1241	4	57461190	57461190	C	T	intronic	THEGL	NA	NA	NA	ncRNA_exonic	ENSG00000248590	NA	NA	NA	NA	NA	4q12	NA	NA	NA	NA	rs73240563	0.22	0.22	0.191	0.215655	0.2237	0.371	0.3012	0.0681	0.1861	0.22	0.32	0.28	0.08	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.983619	NA	NA	NA	NA	NA	0.268	NA	4.1096333
1241	6	32407709	32407709	C	A	UTR5	HLA-DRA	NM_019111:c.-19C>A	NA	NA	UTR5	ENSG00000204287	ENST00000395388:c.-19C>A,ENST00000374982:c.-19C>A	NA	NA	NA	NA	6p21.32	NA	Name=TBP,Oct-2,PAX5-C20,NFKB,BCL3,Pol2-4H8,c-Fos,BCLAF1_(M33-P5B11),Sin3Ak-20,YY1_(C-20),YY1,SP1,RFX5_(N-494),Pol2,USF2,POU2F2,WHIP,TAF1	NA	NA	rs14004	0.39	0.39	0.377	0.409345	0.3877	0.4534	0.4856	0.3215	0.4509	0.38	0.46	0.44	0.27	0.4365	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.108216	2.108216	NA	0.400116	0.33931	NA	0.449	NA	4.1090174
1241	8	110476993	110476993	A	G	exonic	PKHD1L1	NA	synonymous SNV	PKHD1L1:NM_177531:exon49:c.A7932G:p.A2644A	exonic	ENSG00000205038	NA	synonymous SNV	ENSG00000205038:ENST00000378402:exon49:c.A7932G:p.A2644A	NA	NA	8q23.1	NA	NA	NA	NA	rs1673398	0.47	0.47	0.435	0.515575	0.504	0.4147	0.634	0.3918	0.7147	0.5	0.44	0.61	0.36	0.5339	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.747402	NA	NA	0.520039	0.406416	NA	0.594	NA	4.1087276
1241	16	848575	848575	A	G	UTR3	GNG13	NM_016541:c.*144T>C	NA	NA	UTR3	ENSG00000127588	ENST00000248150:c.*144T>C	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs2891064	0.31	0.31	0.313	0.36861	0.2247	0.3681	0.2363	0.3979	0.5716	0.22	0.37	0.26	0.4	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.263739	NA	NA	NA	NA	NA	0.232	NA	4.1086334
1241	20	36989381	36989381	G	A	exonic	LBP	NA	synonymous SNV	LBP:NM_004139:exon6:c.G612A:p.S204S	exonic	ENSG00000129988	NA	synonymous SNV	ENSG00000129988:ENST00000217407:exon6:c.G612A:p.S204S	NA	NA	20q11.23	NA	NA	NA	NA	rs2232596	0.64	0.64	0.615	0.649361	0.4901	0.8819	0.5375	0.6498	0.6524	0.48	0.88	0.56	0.65	0.5553	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.063189	NA	NA	0.512791	0.616432	NA	0.601	NA	4.1084756
1241	2	21251040	21251040	T	G	intronic	APOB	NA	NA	NA	intronic	ENSG00000084674	NA	NA	NA	NA	NA	2p24.1	NA	Name=Pol2,HEY1	NA	NA	rs570877	0.88	0.88	0.881	0.874002	0.8917	0.9623	0.7911	0.8275	0.8865	0.89	0.96	0.83	0.83	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.692656	NA	NA	NA	NA	NA	0.913	NA	4.1083
1241	7	107838637	107838637	C	A	intronic	NRCAM	NA	NA	NA	intronic	ENSG00000091129	NA	NA	NA	NA	NA	7q31.1	Score=873;Name=V$NKX3A_01	NA	NA	NA	rs388557	0.94	0.94	0.951	0.931909	0.8917	0.999	0.9236	0.9637	0.8671	0.89	1	0.91	0.98	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00955	NA	NA	NA	NA	NA	0.906	NA	4.1083
1241	11	113281397	113281397	C	T	UTR3	DRD2	NM_000795:c.*52G>A,NM_016574:c.*52G>A	NA	NA	ncRNA_UTR3	ENSG00000149295	NA	NA	NA	NA	NA	11q23.2	NA	Name=CTCF	NA	NA	rs6276	0.48	0.48	0.485	0.466853	0.6918	0.4673	0.5951	0.1399	0.5859	0.67	0.44	0.6	0.15	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.831932	NA	NA	0.70005	0.229977	NA	0.377	NA	4.10815
1241	19	2853566	2853566	A	G	exonic	ZNF555	NA	synonymous SNV	ZNF555:NM_001172775:exon4:c.A1500G:p.R500R,ZNF555:NM_152791:exon4:c.A1503G:p.R501R	exonic	ENSG00000186300	NA	synonymous SNV	ENSG00000186300:ENST00000334241:exon4:c.A1503G:p.R501R,ENSG00000186300:ENST00000591539:exon4:c.A1500G:p.R500R	NA	NA	19p13.3	NA	Name=SETDB1	NA	NA	rs10412087	0.87	0.87	0.856	0.876198	0.8479	0.999	0.8847	0.7269	0.9744	0.85	1	0.88	0.74	0.8718	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.354846	NA	NA	0.839302	0.756695	NA	0.877	NA	4.1076646
1241	5	64919991	64919991	G	A	intronic	TRIM23	NA	NA	NA	intronic	ENSG00000113595	NA	NA	NA	Score=272;Name=lod=17	NA	5q12.3	NA	Name=Rad21,FOXA2_(SC-6554),Max,ZBTB7A_(SC-34508),CTCF,TAF1,Sin3Ak-20,YY1_(C-20),Ini1,Pol2,PU.1	NA	NA	rs154854	0.56	0.56	0.553	0.577476	0.6213	0.4137	0.5101	0.6271	0.682	0.64	0.41	0.52	0.62	0.6218	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.845995	1.845995	NA	0.649419	0.621652	NA	0.739	NA	4.107481
1241	6	29856445	29856445	C	T	ncRNA_exonic	HLA-H	NA	NA	NA	ncRNA_exonic	ENSG00000206341	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs1611616	0.27	0.27	0.221	0.314696	0.2644	0.2837	0.2248	0.3147	0.4622	0.26	0.24	0.23	0.36	0.2948	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.310467	NA	NA	NA	NA	NA	0.29	NA	4.1074666
1241	5	49929151	49929151	G	A	intergenic	EMB,PARP8	dist=191917;dist=32582	NA	NA	ncRNA_exonic	ENSG00000213956	NA	NA	NA	Score=678;Name=lod=759	NA	5q11.1	NA	NA	NA	NA	rs7721050	0.9	0.9	0.899	0.897364	0.8926	0.9653	0.8573	0.8933	0.8661	0.89	0.96	0.87	0.88	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.249298	NA	NA	NA	NA	NA	0.275	NA	4.1074
1241	5	49929350	49929350	A	G	intergenic	EMB,PARP8	dist=192116;dist=32383	NA	NA	ncRNA_exonic	ENSG00000213956	NA	NA	NA	Score=678;Name=lod=759	NA	5q11.1	NA	NA	NA	NA	rs7709831	0.92	0.92	0.922	0.912939	0.8926	0.995	0.8746	0.9206	0.8661	0.89	0.99	0.88	0.9	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.59301	NA	NA	NA	NA	NA	0.768	NA	4.1074
1241	6	29856439	29856439	T	G	ncRNA_exonic	HLA-H	NA	NA	NA	ncRNA_exonic	ENSG00000206341	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs1611615	0.28	0.28	0.213	0.316494	0.2644	0.2837	0.2262	0.3177	0.4663	0.26	0.25	0.24	0.36	0.2951	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.540198	NA	NA	NA	NA	NA	0.29	NA	4.1071666
1241	4	56770708	56770708	A	C	UTR3	EXOC1	NM_001024924:c.*47A>C,NM_018261:c.*47A>C,NM_178237:c.*47A>C	NA	NA	UTR3	ENSG00000090989	ENST00000381295:c.*47A>C,ENST00000346134:c.*47A>C,ENST00000349598:c.*47A>C	NA	NA	NA	NA	4q12	NA	NA	NA	NA	rs17086150	0.07	0.07	0.06	0.0670927	0.0765	0.002	0.0389	0.1218	0.0706	0.09	0.0035	0.03	0.13	0.0674	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.637142	NA	NA	0.082326	0.119837	NA	0.101	NA	4.1071074
1241	1	120166681	120166681	G	A	exonic	ZNF697	NA	synonymous SNV	ZNF697:NM_001080470:exon3:c.C285T:p.S95S	exonic	ENSG00000143067	NA	synonymous SNV	ENSG00000143067:ENST00000421812:exon3:c.C285T:p.S95S	NA	NA	1p12	NA	NA	NA	NA	rs12067843	0.65	0.65	0.634	0.672324	0.503	0.7758	0.5893	0.7927	0.636	0.51	0.77	0.52	0.79	0.5715	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.945118	NA	NA	0.485211	0.763994	NA	0.63	NA	4.1069556
1241	13	51287408	51287408	C	G	intronic	DLEU7	NA	NA	NA	intronic	ENSG00000186047	NA	NA	NA	Score=329;Name=lod=29	NA	13q14.3	NA	NA	NA	NA	rs41284836	0.24	0.24	0.236	0.214257	0.3191	0.1964	0.196	0.1006	0.2914	0.34	0.21	0.2	0.14	0.2775	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.473326	2.473326	NA	0.296536	0.13714	NA	0.167	NA	4.106864
1241	4	48491010	48491010	A	G	UTR3	SLC10A4	NM_152679:c.*54A>G	NA	NA	UTR3	ENSG00000145248	ENST00000273861:c.*54A>G	NA	NA	NA	NA	4p11	NA	NA	NA	NA	rs3811759	0.18	0.18	0.18	0.191893	0.2266	0.122	0.1182	0.2738	0.1697	0.23	0.1	0.11	0.27	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.455492	NA	NA	NA	NA	NA	0.246	NA	4.1067334
1241	10	73578882	73578882	T	C	intronic	PSAP	NA	NA	NA	intronic	ENSG00000197746	NA	NA	NA	NA	NA	10q22.1	NA	NA	NA	NA	rs4747203	0.42	0.42	0.402	0.409944	0.2793	0.5982	0.3732	0.4592	0.3098	0.28	0.61	0.33	0.48	0.3411	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.166262	NA	NA	0.273023	0.444167	NA	0.449	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000080034.1;CLNDSDB=.;CLNDSDBID=.	4.106577
1241	7	142045897	142045897	C	T	intergenic	LOC730441,MTRNR2L6	dist=73829;dist=328234	NA	NA	downstream	ENSG00000211745	NA	NA	NA	NA	NA	7q34	NA	NA	Name=2	NA	rs361402	0.22	0.22	0.187	0.22524	0.3936	0.2857	0.3199	0.0303	0.1861	0.33	0.2	0.27	0.05	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.221064	NA	NA	NA	NA	NA	0.188	NA	4.1064
1241	9	125390773	125390773	C	T	downstream	OR1B1	NA	NA	NA	ncRNA_intronic	ENSG00000234156	NA	NA	NA	NA	NA	9q33.2	NA	NA	NA	NA	rs4836903	0.11	0.11	0.082	0.111821	0.0606	0.2956	0.1657	0.0219	0.0583	0.06	0.25	0.14	0.03	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.534658	NA	NA	NA	NA	NA	0.051	NA	4.1060666
1241	12	105568176	105568176	G	A	exonic	APPL2	NA	synonymous SNV	APPL2:NM_001251904:exon21:c.C1929T:p.D643D,APPL2:NM_001251905:exon21:c.C1782T:p.D594D,APPL2:NM_018171:exon21:c.C1911T:p.D637D	exonic	ENSG00000136044	NA	synonymous SNV	ENSG00000136044:ENST00000546731:exon2:c.C240T:p.D80D,ENSG00000136044:ENST00000553109:exon7:c.C504T:p.D168D,ENSG00000136044:ENST00000258530:exon21:c.C1911T:p.D637D,ENSG00000136044:ENST00000539978:exon21:c.C1782T:p.D594D,ENSG00000136044:ENST00000551662:exon21:c.C1929T:p.D643D	NA	NA	12q23.3	Score=972;Name=V$NFY_Q6	NA	NA	NA	rs935240	0.91	0.91	0.918	0.934105	0.8499	1	0.9179	0.9327	0.9663	0.85	1	0.91	0.92	0.8815	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.561608	NA	NA	0.829419	0.926237	NA	0.964	NA	4.1058476
1241	9	20786994	20786994	G	C	intronic	FOCAD	NA	NA	NA	ncRNA_exonic	ENSG00000202189	NA	NA	NA	NA	NA	9p21.3	NA	NA	NA	NA	rs10511686	0.18	0.18	0.157	0.164537	0.2276	0.1796	0.1888	0.0983	0.1564	0.24	0.17	0.19	0.1	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.097161	NA	NA	NA	NA	NA	0.145	NA	4.1057333
1241	17	10348806	10348806	G	A	intronic	MYH4	NA	NA	NA	ncRNA_intronic	ENSG00000214970	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs35747402	0.11	0.11	0.084	0.0698882	0.2276	0.001	0.1009	0.0182	0.0266	0.23	NA	0.12	0.03	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.05212	NA	NA	NA	NA	NA	0.087	NA	4.1057333
1241	17	10356736	10356736	C	T	intronic	MYH4	NA	NA	NA	ncRNA_intronic	ENSG00000214970	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs71360263	0.11	0.11	0.096	0.0706869	0.2276	0.002	0.1009	0.0212	0.0256	0.23	NA	0.12	0.03	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.543755	NA	NA	NA	NA	NA	0.087	NA	4.1057333
1241	20	44746982	44746982	T	C	UTR5	CD40	NM_001250:c.-1T>C,NM_152854:c.-1T>C	NA	NA	UTR5	ENSG00000101017	ENST00000372285:c.-1T>C,ENST00000372276:c.-1T>C	NA	NA	Score=243;Name=lod=13	NA	20q13.12	NA	Name=TBP,IRF1,PAX5-C20,PAX5-N19,HEY1,NFKB,Sin3Ak-20,Pol2-4H8,Oct-2,Pol2,SP1,POU2F2,TAF1	NA	NA	rs1883832	0.76	0.76	0.746	0.771166	0.7406	0.5675	0.7882	0.9743	0.726	0.75	0.59	0.73	0.98	0.7527	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.754855	1.754855	NA	0.734302	0.937131	NA	0.797	NA	4.1057314
1242	11	60673868	60673868	T	C	UTR5	PRPF19	NM_014502:c.-14A>G	NA	NA	UTR5	ENSG00000110107	ENST00000227524:c.-14A>G,ENST00000541371:c.-14A>G,ENST00000546152:c.-3524A>G	NA	NA	NA	NA	11q12.2	NA	Name=TBP,USF-1,PAX5-C20,c-Myc,CCNT2,NFKB,Sin3Ak-20,HA-E2F1,Pol2-4H8,YY1,ELK4,Pol2(b),ELF1_(SC-631),TAF7_(SQ-8),YY1_(C-20),Pol2,HMGN3,GABP,ETS1,TAF1	NA	NA	rs17155470	0.36	0.36	0.383	0.357428	0.3897	0.3254	0.4006	0.3109	0.3896	0.39	0.33	0.41	0.32	0.4474	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.132357	NA	NA	0.391437	0.29386	NA	0.406	NA	4.1047964
1242	5	80724572	80724572	G	A	ncRNA_intronic	RNU5D-1,RNU5E-1	NA	NA	NA	intronic	ENSG00000145687	NA	NA	NA	NA	NA	5q14.1	NA	NA	NA	NA	rs3764985	0.12	0.12	0.092	0.102835	0.2286	0.0288	0.1686	0.0083	0.1309	0.22	0.03	0.22	0.01	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.572555	NA	NA	NA	NA	NA	0.036	NA	4.1047333
1242	14	88970925	88970925	C	T	intronic	PTPN21	NA	NA	NA	ncRNA_intronic	ENSG00000258983	NA	NA	NA	NA	NA	14q31.3	NA	NA	NA	NA	rs1998670	0.26	0.26	0.248	0.241214	0.2286	0.3562	0.2104	0.1815	0.2382	0.24	0.35	0.22	0.22	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.583358	NA	NA	NA	NA	NA	0.29	NA	4.1047333
1242	5	147488367	147488367	C	T	exonic	SPINK5	NA	synonymous SNV	SPINK5:NM_001127698:exon18:c.C1659T:p.V553V,SPINK5:NM_001127699:exon18:c.C1659T:p.V553V,SPINK5:NM_006846:exon18:c.C1659T:p.V553V	exonic	ENSG00000133710	NA	synonymous SNV	ENSG00000133710:ENST00000256084:exon18:c.C1659T:p.V553V,ENSG00000133710:ENST00000359874:exon18:c.C1659T:p.V553V,ENSG00000133710:ENST00000398454:exon18:c.C1659T:p.V553V,ENSG00000133710:ENST00000508733:exon18:c.C1602T:p.V534V	NA	NA	5q32	NA	NA	NA	NA	rs2303071	0.57	0.57	0.581	0.602037	0.4901	0.4851	0.6715	0.8086	0.5092	0.46	0.46	0.65	0.83	0.5527	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.313596	NA	NA	0.519481	0.763215	ID=COSM149973,COSM449063;OCCURENCE=1(breast),1(stomach)	0.572	NA	4.1043856
1242	19	43243218	43243218	A	G	exonic	PSG3	NA	synonymous SNV	PSG3:NM_021016:exon2:c.T88C:p.L30L	exonic	ENSG00000221826	NA	synonymous SNV	ENSG00000221826:ENST00000327495:exon2:c.T88C:p.L30L,ENSG00000221826:ENST00000595140:exon2:c.T88C:p.L30L	NA	NA	19q13.2	NA	NA	NA	NA	rs12185497	0.5	0.5	0.493	0.65655	0.5507	0.4762	0.6571	0.8911	0.6339	0.45	0.37	0.54	0.69	0.5895	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.388844	NA	NA	0.422674	0.775886	ID=COSM148646;OCCURENCE=1(stomach)	NA	NA	4.1037926
1242	19	44417575	44417575	A	G	exonic	ZNF45	NA	synonymous SNV	ZNF45:NM_003425:exon10:c.T2013C:p.F671F	exonic	ENSG00000124459	NA	synonymous SNV	ENSG00000124459:ENST00000589703:exon4:c.T2013C:p.F671F,ENSG00000124459:ENST00000269973:exon10:c.T2013C:p.F671F	NA	NA	19q13.31	NA	NA	NA	NA	rs417699	0.59	0.59	0.56	0.541534	0.5149	0.8046	0.6585	0.388	0.4223	0.51	0.83	0.59	0.44	0.5431	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.225987	NA	NA	0.504884	0.399001	ID=COSM1179784;OCCURENCE=1(prostate)	0.522	NA	4.1037826
1242	3	124748226	124748226	G	A	exonic	HEG1	NA	synonymous SNV	HEG1:NM_020733:exon2:c.C423T:p.G141G	exonic	ENSG00000173706	NA	synonymous SNV	ENSG00000173706:ENST00000311127:exon2:c.C423T:p.G141G	NA	NA	3q21.2	NA	NA	NA	NA	rs2860440	0.49	0.49	0.467	0.488818	0.5457	0.4792	0.4697	0.3775	0.6043	0.56	0.5	0.47	0.37	0.512	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.333168	NA	NA	0.505198	0.365664	ID=COSM1418564;OCCURENCE=1(large_intestine)	0.391	NA	4.1037686
1242	19	40325016	40325016	T	C	upstream;downstream	DYRK1B;FBL	NA	NA	NA	upstream;downstream	ENSG00000105204;ENSG00000105202	NA	NA	NA	NA	NA	19q13.2	NA	Name=Mxi1_(bHLH),ZNF263,Nrf1	NA	NA	rs2072290	0.47	0.47	0.466	0.492412	0.5636	0.2212	0.4769	0.7141	0.41	0.55	0.18	0.46	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2119	NA	NA	NA	NA	NA	0.522	NA	4.1030666
1242	3	124738107	124738107	C	T	exonic	HEG1	NA	synonymous SNV	HEG1:NM_020733:exon5:c.G1587A:p.S529S	exonic	ENSG00000173706	NA	synonymous SNV	ENSG00000173706:ENST00000311127:exon5:c.G1587A:p.S529S	NA	NA	3q21.2	NA	NA	NA	NA	rs59232004	0.49	0.49	0.466	0.492212	0.5437	0.4762	0.4669	0.3971	0.6022	0.56	0.5	0.46	0.38	0.5155	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.034723	NA	NA	0.504654	0.377184	NA	0.413	NA	4.1028126
1242	19	19971852	19971852	T	G	intergenic	ZNF506,ZNF253	dist=39292;dist=4862	NA	NA	intergenic	ENSG00000270325,ENSG00000256771	dist=3516;dist=4843	NA	NA	NA	NA	19p13.11	NA	Name=TAF7_(SQ-8),Pol2,TAF1	NA	NA	rs66624169	0.42	0.42	0.4	0.430112	0.2306	0.6359	0.3761	0.5106	0.3528	0.24	0.66	0.32	0.49	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.084902	NA	NA	NA	NA	NA	0.377	NA	4.1027334
1242	16	81050817	81050817	T	C	intronic	CENPN	NA	NA	NA	ncRNA_intronic	ENSG00000260213	NA	NA	NA	NA	NA	16q23.2	NA	NA	NA	NA	rs9889194	0.31	0.31	0.315	0.29353	0.2306	0.4365	0.3329	0.2988	0.1759	0.23	0.44	0.33	0.28	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.128701	NA	NA	NA	NA	NA	0.232	NA	4.1027333
1242	16	81051101	81051101	C	T	intronic	CENPN	NA	NA	NA	ncRNA_intronic	ENSG00000260213	NA	NA	NA	NA	NA	16q23.2	NA	NA	NA	NA	rs9888895	0.31	0.31	0.308	0.293131	0.2306	0.4365	0.3314	0.298	0.1759	0.23	0.44	0.33	0.28	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.879104	NA	NA	NA	NA	NA	0.232	NA	4.1027333
1242	2	233245045	233245045	C	T	intronic	ALPP	NA	NA	NA	ncRNA_intronic	ENSG00000224516	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs28733638	0.11	0.11	0.063	0.0730831	0.0726	0.1667	0.0447	0.0257	0.0613	0.09	0.21	0.07	0.05	0.0774	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.237935	NA	NA	0.081047	0.042669	NA	0.036	NA	4.1022863
1242	9	130210111	130210111	T	C	intronic	RPL12	NA	NA	NA	intronic	ENSG00000197958	NA	NA	NA	NA	NA	9q33.3	NA	Name=Pol2,Pol2(phosphoS2),JunD	Name=60	NA	rs1139400	0.59	0.59	0.558	0.571486	0.664	0.4226	0.6715	0.6097	0.5072	0.67	0.42	0.64	0.62	0.6139	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.390617	NA	NA	0.619884	0.646231	NA	0.587	NA	4.102216
1242	16	74670458	74670458	C	T	exonic	RFWD3	NA	synonymous SNV	RFWD3:NM_018124:exon8:c.G1212A:p.T404T	exonic	ENSG00000168411	NA	synonymous SNV	ENSG00000168411:ENST00000361070:exon8:c.G1212A:p.T404T,ENSG00000168411:ENST00000571750:exon9:c.G1212A:p.T404T	NA	NA	16q23.1	NA	NA	NA	NA	rs4888262	0.63	0.63	0.65	0.657348	0.495	0.7877	0.4222	0.8094	0.6513	0.47	0.78	0.45	0.83	0.5508	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.194636	NA	NA	0.518837	0.752502	NA	0.638	NA	4.1020296
1242	13	111605161	111605161	G	T	intergenic	ANKRD10,ARHGEF7	dist=37745;dist=162463	NA	NA	intergenic	ENSG00000227105,ENSG00000225760	dist=13030;dist=30493	NA	NA	Score=333;Name=lod=30	NA	13q34	NA	NA	NA	NA	rs55812376	0.13	0.13	0.11	0.101637	0.2316	0.0218	0.1441	0.0772	0.0532	0.23	0.02	0.15	0.1	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.546511	NA	NA	NA	NA	ID=COSN164560;OCCURENCE=1(breast)	0.101	NA	4.1017334
1242	1	161565479	161565479	G	A	intronic	FCGR2C	NA	NA	NA	exonic	ENSG00000244682	NA	synonymous SNV	ENSG00000244682:ENST00000543859:exon1:c.G135A:p.L45L	NA	NA	1q23.3	NA	NA	NA	NA	rs111504845	0.45	0.45	0.382	0.441893	0.331	0.62	0.5144	0.3298	0.4724	0.32	0.67	0.49	0.35	0.4006	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.24702	NA	NA	NA	NA	NA	0.087	NA	4.1017333
1242	11	117691386	117691386	G	A	UTR3	FXYD2,FXYD6-FXYD2	NM_001680:c.*1C>T,NM_021603:c.*1C>T;NM_001204268:c.*1C>T,NM_001243598:c.*35C>T	NA	NA	ncRNA_exonic	ENSG00000254844	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs869789	0.15	0.15	0.122	0.117412	0.1322	0.1895	0.1816	0.0741	0.0409	0.14	0.2	0.2	0.09	0.1319	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.18131	NA	NA	0.134777	0.092458	NA	0.101	NA	4.101123
1242	20	61528074	61528074	T	C	exonic	DIDO1	NA	synonymous SNV	DIDO1:NM_001193369:exon7:c.A1863G:p.A621A,DIDO1:NM_001193370:exon7:c.A1863G:p.A621A,DIDO1:NM_033081:exon7:c.A1863G:p.A621A,DIDO1:NM_080797:exon7:c.A1863G:p.A621A	exonic	ENSG00000101191	NA	synonymous SNV	ENSG00000101191:ENST00000266070:exon7:c.A1863G:p.A621A,ENSG00000101191:ENST00000395335:exon7:c.A1863G:p.A621A,ENSG00000101191:ENST00000395340:exon7:c.A1863G:p.A621A,ENSG00000101191:ENST00000395343:exon7:c.A1863G:p.A621A	NA	NA	20q13.33	NA	NA	NA	NA	rs910149	0.64	0.64	0.642	0.673922	0.4801	0.6577	0.5836	0.9433	0.59	0.46	0.65	0.6	0.94	0.5701	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.659375	NA	NA	0.515581	0.860872	NA	0.674	NA	4.1008856
1242	4	108535335	108535335	C	T	UTR3	PAPSS1	NM_005443:c.*70G>A	NA	NA	UTR3	ENSG00000138801	ENST00000265174:c.*70G>A	NA	NA	NA	NA	4q25	NA	NA	NA	NA	rs9569	0.24	0.24	0.223	0.192692	0.2326	0.3452	0.2565	0.0446	0.1493	0.24	0.38	0.25	0.07	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.277203	1.277203	NA	NA	NA	NA	0.275	NA	4.1007334
1242	10	27538569	27538569	G	A	ncRNA_exonic	LRRC37A6P	NA	NA	NA	ncRNA_exonic	ENSG00000230445	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs11015624	0.16	0.16	0.147	0.138179	0.1879	0.0149	0.2795	0.1861	0.0491	0.19	0.03	0.26	0.2	0.1783	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.337419	NA	NA	0.200189	0.184971	NA	0.239	NA	4.1002776
1242	7	32968136	32968136	G	A	ncRNA_intronic	RP9P	NA	NA	NA	ncRNA_intronic	ENSG00000205763	NA	NA	NA	NA	NA	7p14.3	NA	NA	NA	NA	rs4720085	0.39	0.39	0.354	0.356629	0.5666	0.2808	0.5476	0.1558	0.3548	0.57	0.31	0.52	0.11	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.173524	NA	NA	NA	NA	ID=COSN168011;OCCURENCE=1(large_intestine)	0.37	NA	4.1000666
1242	7	32968346	32968346	G	A	ncRNA_intronic	RP9P	NA	NA	NA	ncRNA_intronic	ENSG00000205763	NA	NA	NA	NA	NA	7p14.3	NA	NA	NA	NA	rs2060731	0.39	0.39	0.36	0.359625	0.5666	0.2808	0.5504	0.1657	0.3548	0.57	0.31	0.52	0.12	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.678283	NA	NA	NA	NA	NA	0.37	NA	4.1000666
1242	8	10390320	10390320	C	T	intronic	PRSS55	NA	NA	NA	ncRNA_intronic	ENSG00000253649	NA	NA	NA	NA	NA	8p23.1	NA	NA	NA	NA	rs10106714	0.29	0.29	0.275	0.282947	0.2336	0.3185	0.2824	0.3374	0.2239	0.23	0.32	0.28	0.34	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.057578	NA	NA	NA	NA	NA	0.268	NA	4.0997333
1242	19	4947056	4947056	C	T	intronic	UHRF1	NA	NA	NA	ncRNA_intronic	ENSG00000034063	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs12974635	0.15	0.15	0.16	0.165535	0.2336	0.0119	0.1758	0.2345	0.1534	0.21	0.01	0.17	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.334538	NA	NA	NA	NA	NA	0.13	NA	4.0997333
1242	5	14420027	14420027	A	C	exonic	TRIO	NA	synonymous SNV	TRIO:NM_007118:exon34:c.A5100C:p.T1700T	exonic	ENSG00000038382	NA	synonymous SNV	ENSG00000038382:ENST00000513206:exon30:c.A4299C:p.T1433T,ENSG00000038382:ENST00000344204:exon34:c.A5100C:p.T1700T,ENSG00000038382:ENST00000512070:exon34:c.A4923C:p.T1641T,ENSG00000038382:ENST00000537187:exon34:c.A5100C:p.T1700T	Score=514;Name=lod=164	NA	5p15.2	NA	NA	NA	NA	rs30612	0.85	0.85	0.856	0.81869	0.8757	0.6984	0.8271	0.9864	0.6513	0.87	0.72	0.82	0.98	0.8298	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.443033	NA	NA	0.861512	0.963232	NA	0.891	NA	4.0996546
1242	11	2016908	2016908	G	A	ncRNA_exonic	H19	NA	NA	NA	ncRNA_exonic	ENSG00000130600	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs217727	0.21	0.21	0.166	0.202077	0.1819	0.3194	0.2709	0.0711	0.2301	0.17	0.34	0.25	0.1	0.2	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.521229	NA	NA	0.185678	0.085714	NA	0.116	NA	4.0990886
1242	4	77033725	77033725	C	A	UTR3	ART3	NM_001130017:c.*53C>A,NM_001179:c.*53C>A,NM_001130016:c.*53C>A	NA	NA	UTR3	ENSG00000156219	ENST00000341029:c.*53C>A,ENST00000349321:c.*53C>A,ENST00000355810:c.*53C>A	NA	NA	NA	NA	4q21.1	NA	NA	NA	NA	rs14773	0.41	0.41	0.416	0.432508	0.2346	0.5446	0.3847	0.562	0.3793	0.24	0.54	0.36	0.56	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.295178	2.295178	NA	NA	NA	NA	0.333	NA	4.0987334
1242	20	44523547	44523547	G	A	intronic	CTSA	NA	NA	NA	intronic	ENSG00000064601	NA	NA	NA	NA	NA	20q13.12	Score=837;Name=V$EGR1_01	NA	Name=4	NA	rs2075961	0.66	0.66	0.651	0.678315	0.6233	0.7073	0.7478	0.6536	0.6892	0.65	0.69	0.7	0.61	0.6602	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.111878	NA	NA	0.618256	0.667499	NA	0.659	NA	4.098244
1242	11	56508032	56508032	G	A	intronic	OR8U8	NA	NA	NA	ncRNA_exonic	ENSG00000181325	NA	NA	NA	NA	NA	11q12.1	NA	NA	NA	NA	rs11228757	0.31	0.31	0.251	0.342851	0.2356	0.619	0.4885	0.0189	0.5031	0.22	0.59	0.44	0.03	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.116105	NA	NA	NA	NA	NA	0.261	NA	4.0977333
1242	14	76964926	76964926	C	T	intronic	ESRRB	NA	NA	NA	ncRNA_intronic	ENSG00000259124	NA	NA	NA	NA	NA	14q24.3	NA	NA	NA	NA	rs10139705	0.22	0.22	0.235	0.2498	0.2356	0.254	0.1816	0.1899	0.3896	0.23	0.26	0.17	0.2	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.653115	NA	NA	NA	NA	NA	0.109	NA	4.0977333
1242	22	39441203	39441203	C	T	exonic	APOBEC3F	NA	synonymous SNV	APOBEC3F:NM_145298:exon3:c.C429T:p.R143R	exonic	ENSG00000128394	NA	synonymous SNV	ENSG00000128394:ENST00000308521:exon3:c.C429T:p.R143R	NA	NA	22q13.1	NA	NA	NA	NA	rs4821862	0.58	0.58	0.57	0.59345	0.492	0.7123	0.6427	0.5454	0.6053	0.47	0.7	0.67	0.54	0.545	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.104979	NA	NA	0.531977	0.544939	NA	0.558	NA	4.0976896
1242	19	51503653	51503653	T	C	intronic	KLK8	NA	NA	NA	ncRNA_intronic	ENSG00000267879	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs10410942	0.13	0.13	0.126	0.141374	0.0785	0.003	0.0965	0.3986	0.0327	0.08	0.0017	0.13	0.36	0.0888	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.108952	NA	NA	0.068372	0.347935	NA	0.159	NA	4.0976613
1242	3	49722356	49722356	G	A	intronic	MST1	NA	NA	NA	ncRNA_exonic	ENSG00000259970	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs9837520	0.24	0.24	0.22	NA	NA	NA	NA	NA	NA	0.29	0.06	0.22	0.37	0.2357	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.68294	NA	NA	NA	NA	NA	0.058	NA	4.0976333
1242	11	89224453	89224453	A	C	UTR5	NOX4	NM_001143836:c.-39T>G,NM_016931:c.-39T>G	NA	NA	UTR5	ENSG00000086991	ENST00000535633:c.-747T>G,ENST00000534731:c.-39T>G,ENST00000263317:c.-39T>G,ENST00000525196:c.-39T>G,ENST00000527626:c.-58452T>G,ENST00000529343:c.-39T>G,ENST00000393282:c.-39T>G	NA	NA	NA	NA	11q14.3	NA	Name=TBP,TAF7_(SQ-8),YY1_(C-20)	Name=92	NA	rs2289125	0.55	0.55	0.477	0.54353	0.7813	0.5377	0.6297	0.1929	0.7178	0.77	0.52	0.62	0.2	0.6895	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.865649	NA	NA	0.764948	0.283333	NA	0.428	NA	4.0975854
1242	3	124746182	124746182	C	A	exonic	HEG1	NA	synonymous SNV	HEG1:NM_020733:exon3:c.G780T:p.P260P	exonic	ENSG00000173706	NA	synonymous SNV	ENSG00000173706:ENST00000311127:exon3:c.G780T:p.P260P	NA	NA	3q21.2	NA	NA	NA	NA	rs2333041	0.51	0.51	0.49	0.513578	0.5457	0.4782	0.4755	0.469	0.6043	0.56	0.5	0.48	0.45	0.5178	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.087866	NA	NA	0.505898	0.447368	NA	0.428	NA	4.0972686
1242	6	56471995	56471995	C	T	ncRNA_intronic	RNU6-71P	NA	NA	NA	exonic	ENSG00000151914	NA	synonymous SNV	ENSG00000151914:ENST00000439203:exon26:c.G5820A:p.L1940L,ENSG00000151914:ENST00000446842:exon26:c.G5820A:p.L1940L,ENSG00000151914:ENST00000312431:exon36:c.G6798A:p.L2266L,ENSG00000151914:ENST00000361203:exon36:c.G6798A:p.L2266L,ENSG00000151914:ENST00000370769:exon36:c.G6798A:p.L2266L,ENSG00000151914:ENST00000370754:exon39:c.G7332A:p.L2444L	NA	NA	6p12.1	NA	NA	NA	NA	rs16888055	0.32	0.32	0.313	0.291534	0.3648	0.248	0.3545	0.2927	0.2147	0.35	0.24	0.36	0.32	0.3318	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.163957	NA	NA	0.372892	0.312261	NA	0.37	NA	4.0971746
1242	3	63466333	63466333	T	C	ncRNA_intronic	SYNPR-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000241359	NA	NA	NA	NA	NA	3p14.2	NA	NA	NA	NA	rs1451308	0.58	0.58	0.548	0.595647	0.5696	0.5486	0.6326	0.6717	0.5419	0.57	0.54	0.57	0.64	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.129832	NA	NA	NA	NA	NA	0.63	NA	4.0970666
1242	10	5037914	5037914	G	C	intronic	AKR1C2	NA	NA	NA	ncRNA_intronic	ENSG00000224251	NA	NA	NA	NA	NA	10p15.1	NA	NA	NA	NA	rs146951526	0.04	0.04	0.036	0.034345	0.0865	NA	0.0548	0.0136	0.0297	0.08	NA	0.06	0.02	0.0656	0.084	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.300108	NA	NA	0.08444	0.030427	NA	NA	NA	4.0967933
1242	1	55138673	55138673	C	T	ncRNA_intronic	HEATR8-TTC4	NA	NA	NA	intronic	ENSG00000184313,ENSG00000271723	NA	NA	NA	NA	NA	1p32.3	NA	NA	NA	NA	rs564400	0.26	0.26	0.232	0.304113	0.2366	0.2946	0.2795	0.2564	0.4652	0.24	0.28	0.27	0.26	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.292228	NA	NA	NA	NA	NA	0.333	NA	4.0967333
1242	6	169631994	169631994	C	G	intronic	THBS2	NA	NA	NA	ncRNA_intronic	ENSG00000226445	NA	NA	NA	NA	NA	6q27	NA	NA	NA	NA	rs11966041	0.29	0.29	0.278	0.288139	0.2366	0.2569	0.2421	0.5265	0.0838	0.23	0.23	0.23	0.5	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.568106	NA	NA	NA	NA	NA	0.261	NA	4.0967333
1242	7	47913459	47913459	T	C	intronic	PKD1L1	NA	NA	NA	intronic	ENSG00000136273,ENSG00000158683	NA	NA	NA	NA	NA	7p12.3	NA	NA	Name=67	NA	rs62447062	0.31	0.31	0.327	0.346046	0.2932	0.0962	0.3516	0.5953	0.317	0.29	0.08	0.35	0.59	0.3241	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.140591	NA	NA	0.286163	0.554698	NA	0.312	NA	4.096537
1242	4	25507698	25507698	G	A	intergenic	ANAPC4,SLC34A2	dist=87578;dist=149737	NA	NA	ncRNA_exonic	ENSG00000248608	NA	NA	NA	Score=762;Name=lod=1671	NA	4p15.2	NA	NA	NA	NA	rs6448365	0.82	0.82	0.825	0.810503	0.9036	0.7758	0.8501	0.7133	0.8538	0.9	0.77	0.87	0.7	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.676552	NA	NA	NA	NA	NA	0.877	NA	4.0964
1242	1	26880989	26880989	T	C	intronic	RPS6KA1	NA	NA	NA	intronic	ENSG00000117676	NA	NA	NA	NA	NA	1p36.11	NA	NA	Name=3	NA	rs873151	0.43	0.43	0.417	0.459665	0.2843	0.7639	0.3487	0.3238	0.589	0.29	0.75	0.34	0.34	0.3569	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.863351	NA	NA	0.262414	0.294075	ID=COSN163014;OCCURENCE=1(breast)	0.326	NA	4.096386
1242	4	1369051	1369051	A	C	intronic	UVSSA	NA	NA	NA	UTR5	ENSG00000163945	ENST00000512728:c.-160A>C	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs150398177	0.03	0.03	0.026	0.0225639	0.0716	NA	0.0303	0.0023	0.0174	0.07	NA	0.03	0.0041	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.130088	NA	NA	NA	NA	NA	0.007	NA	4.0950667
1242	8	125033678	125033678	G	A	ncRNA_intronic	FER1L6-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000181171	NA	NA	NA	NA	NA	8q24.13	NA	NA	NA	NA	rs7820272	0.45	0.45	0.462	0.419129	0.5716	0.4266	0.3415	0.3298	0.4305	0.56	0.42	0.41	0.35	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.189862	NA	NA	NA	NA	NA	0.362	NA	4.0950666
1242	10	1070461	1070461	C	T	ncRNA_intronic	IDI2-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000232656	NA	NA	NA	NA	NA	10p15.3	NA	NA	NA	NA	rs3793777	0.55	0.55	0.571	0.545327	0.5716	0.4375	0.5317	0.671	0.4693	0.57	0.39	0.56	0.68	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.391929	NA	NA	NA	NA	NA	0.609	NA	4.0950666
1243	2	89197190	89197190	C	T	intergenic	MIR4436A,NONE	dist=85222;dist=NONE	NA	NA	exonic	ENSG00000211599	NA	nonsynonymous SNV	ENSG00000211599:ENST00000390244:exon2:c.C235T:p.P79S	NA	NA	2p11.2	NA	NA	NA	NA	rs55661410	0.33	0.33	0.328	0.33107	0.2197	0.503	0.3314	0.2247	0.4121	0.22	0.59	0.31	0.21	0.2787	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.193274	2.193274	0.01	0.240389	0.223885	NA	0.174	NA	4.0945444
1243	1	186418600	186418600	C	T	ncRNA_UTR5	PDC	NA	NA	NA	UTR5	ENSG00000116703	ENST00000391997:c.-9G>A	NA	NA	NA	NA	1q31.1	NA	NA	NA	NA	rs12407957	0.17	0.17	0.178	0.203474	0.1203	0.0377	0.196	0.4433	0.1411	0.12	0.04	0.21	0.38	0.1472	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.023884	NA	1	0.13814	0.407172	NA	0.254	NA	4.09436
1243	19	3533274	3533274	G	A	intronic	FZR1	NA	NA	NA	intronic	ENSG00000105325	NA	NA	NA	NA	NA	19p13.3	NA	Name=Pol2(phosphoS2)	NA	NA	rs740681	0.4	0.4	0.368	0.353435	0.2942	0.8016	0.4726	0.0151	0.3252	0.3	0.83	0.4	0.03	0.3405	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.050208	NA	NA	0.270993	0.062188	NA	0.29	NA	4.094307
1243	10	1068802	1068802	G	A	ncRNA_intronic	IDI2-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000232656	NA	NA	NA	NA	NA	10p15.3	NA	NA	NA	NA	rs3750729	0.55	0.55	0.54	0.545727	0.5726	0.4296	0.5403	0.6793	0.4611	0.57	0.39	0.56	0.68	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.080081	NA	NA	NA	NA	NA	0.594	NA	4.0940666
1243	19	51994813	51994813	G	T	UTR3	SIGLEC12	NM_033329:c.*82C>A,NM_053003:c.*82C>A	NA	NA	UTR3	ENSG00000254521	ENST00000596742:c.*1085C>A,ENST00000291707:c.*82C>A	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs16982733	0.21	0.21	0.196	0.204673	0.2396	0.1002	0.1729	0.3366	0.1207	0.23	0.09	0.19	0.31	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.123668	NA	NA	NA	NA	NA	0.283	NA	4.0937334
1243	19	54742738	54742738	G	C	UTR3	LILRA6	NM_024318:c.*91C>G	NA	NA	UTR3	ENSG00000244482	ENST00000430421:c.*869C>G,ENST00000396365:c.*91C>G	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs448461	0.29	0.29	0.277	0.26897	0.2396	0.5119	0.268	0.1248	0.2444	0.26	0.5	0.24	0.11	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.701624	NA	NA	NA	NA	NA	0.225	NA	4.0937334
1243	8	52233276	52233276	C	A	intronic	PXDNL	NA	NA	NA	ncRNA_intronic	ENSG00000253664	NA	NA	NA	NA	NA	8q11.22	NA	NA	NA	NA	rs7827306	0.31	0.31	0.288	0.321086	0.2396	0.1429	0.2277	0.6346	0.2311	0.24	0.15	0.26	0.63	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.318647	NA	NA	NA	NA	NA	0.312	NA	4.0937333
1243	19	6898487	6898487	G	T	intronic	EMR1	NA	NA	NA	ncRNA_intronic	ENSG00000269385	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs330882	0.41	0.41	0.44	0.436102	0.2396	0.4544	0.4193	0.6793	0.3027	0.23	0.48	0.37	0.62	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.018427	NA	NA	NA	NA	NA	0.428	NA	4.0937333
1243	15	25436689	25436689	C	T	downstream	SNORD115-10,SNORD115-12,SNORD115-5,SNORD115-9	NA	NA	NA	ncRNA_intronic	ENSG00000224078	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs140979701	0.01	0.01	0.007	0.0107827	0.0239	NA	0.0159	0.0015	0.0174	0.02	NA	0.02	0.002	0.0201	0.029	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.363488	NA	NA	0.029131	0.005734	NA	0.022	NA	4.0935356
1243	1	227172903	227172903	G	A	intronic	ADCK3	NA	NA	NA	intronic	ENSG00000163050	NA	NA	NA	NA	NA	1q42.13	NA	NA	Name=4	NA	rs2297415	0.3	0.3	0.322	0.269569	0.4414	0.1587	0.2853	0.2731	0.1912	0.44	0.15	0.31	0.25	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.229791	NA	NA	0.465522	0.295918	NA	0.355	NA	4.093078
1243	3	196051403	196051403	A	G	ncRNA_intronic	TM4SF19-TCTEX1D2	NA	NA	NA	ncRNA_exonic	ENSG00000235897	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs2280526	0.65	0.65	0.631	0.631789	0.5736	0.873	0.6023	0.441	0.7219	0.59	0.88	0.62	0.48	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.487193	NA	NA	NA	NA	NA	0.58	NA	4.0930666
1243	2	112754828	112754828	G	T	intronic	MERTK	NA	NA	NA	intronic	ENSG00000153208	NA	NA	NA	NA	NA	2q13	NA	NA	NA	NA	rs3811632	0.27	0.27	0.253	0.303914	0.3032	0.1062	0.3847	0.3578	0.3783	0.34	0.1	0.34	0.34	0.3197	0.34	0.1	T	.	.	.	.	.	.	1.000	P	.	.	.	.	-0.972	T	0.000	T	.	-0.272	2.697	-0.384	0.107	0.207	1.192	-0.271843	NA	0	0.284279	0.344749	NA	0.304	NA	4.092821
1243	4	84216370	84216370	G	A	UTR3	HPSE	NM_001098540:c.*127C>T,NM_001199830:c.*127C>T,NM_001166498:c.*127C>T,NM_006665:c.*127C>T	NA	NA	UTR3	ENSG00000173083	ENST00000405413:c.*127C>T,ENST00000311412:c.*127C>T	NA	NA	NA	NA	4q21.23	NA	NA	NA	NA	rs6855404	0.21	0.21	0.182	0.229832	0.2406	0.1091	0.3084	0.2572	0.2505	0.25	0.1	0.26	0.24	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.739613	NA	NA	NA	NA	NA	NA	NA	4.0927334
1243	11	71381158	71381158	T	G	intergenic	KRTAP5-11,FAM86C1	dist=87237;dist=117399	NA	NA	ncRNA_exonic	ENSG00000239481	NA	NA	NA	Score=784;Name=lod=2055	NA	11q13.4	NA	NA	NA	NA	rs4245449	0.88	0.88	0.865	0.871605	0.9076	0.8383	0.9352	0.8033	0.9162	0.91	0.88	0.95	0.79	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.304667	NA	NA	NA	NA	NA	0.304	NA	4.0924
1243	15	31712631	31712631	T	C	intergenic	KLF13,OTUD7A	dist=42529;dist=62698	NA	NA	ncRNA_exonic	ENSG00000259179	NA	NA	NA	Score=689;Name=lod=845	NA	15q13.3	NA	NA	NA	NA	rs4779873	0.96	0.96	0.956	0.96226	0.9076	1	0.9424	0.9947	0.9499	0.92	1	0.94	0.99	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.436005	NA	NA	NA	NA	NA	0.913	NA	4.0924
1243	16	27456613	27456613	G	C	intronic	IL21R	NA	NA	NA	intronic	ENSG00000103522	NA	NA	NA	NA	NA	16p12.1	Score=889;Name=V$ARP1_01	NA	NA	NA	rs963154	0.3	0.3	0.295	0.273163	0.3121	0.0992	0.2954	0.4955	0.0961	0.32	0.1	0.29	0.51	0.2894	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.308504	NA	NA	0.306279	0.469731	NA	0.268	NA	4.092221
1243	3	9952706	9952706	A	G	exonic	IL17RE	NA	synonymous SNV	IL17RE:NM_001193380:exon9:c.A960G:p.T320T,IL17RE:NM_153480:exon9:c.A960G:p.T320T,IL17RE:NM_153483:exon10:c.A1080G:p.T360T	exonic	ENSG00000163701	NA	synonymous SNV	ENSG00000163701:ENST00000383814:exon9:c.A960G:p.T320T,ENSG00000163701:ENST00000454190:exon9:c.A960G:p.T320T,ENSG00000163701:ENST00000295980:exon10:c.A960G:p.T320T,ENSG00000163701:ENST00000421412:exon10:c.A1059G:p.T353T	NA	NA	3p25.3	NA	NA	NA	NA	rs279572	0.43	0.43	0.431	0.426917	0.5527	0.0942	0.4683	0.6384	0.3252	0.55	0.07	0.47	0.65	0.4842	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.218924	NA	NA	0.537674	0.620291	NA	0.341	NA	4.0920926
1243	19	49962892	49962892	G	A	intronic	ALDH16A1	NA	NA	NA	intronic	ENSG00000161618	NA	NA	NA	NA	NA	19q13.33	NA	Name=YY1_(C-20),SIX5	NA	NA	rs62128062	0.2	0.2	0.213	0.170927	0.3191	0.005	0.2032	0.2163	0.1053	0.32	0.01	0.23	0.23	0.2567	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.912237	NA	NA	0.332287	0.206764	NA	0.239	NA	4.091913
1243	4	84216368	84216368	C	G	UTR3	HPSE	NM_001098540:c.*129G>C,NM_001199830:c.*129G>C,NM_001166498:c.*129G>C,NM_006665:c.*129G>C	NA	NA	UTR3	ENSG00000173083	ENST00000405413:c.*129G>C,ENST00000311412:c.*129G>C	NA	NA	NA	NA	4q21.23	NA	NA	NA	NA	rs6856901	0.23	0.23	0.211	0.255791	0.2416	0.1091	0.3112	0.3533	0.2505	0.25	0.1	0.26	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.748659	NA	NA	NA	NA	NA	0.036	NA	4.0917334
1243	2	70915320	70915320	T	A	intronic	ADD2	NA	NA	NA	ncRNA_intronic	ENSG00000235035	NA	NA	NA	NA	NA	2p13.3	NA	NA	NA	NA	rs7340254	0.33	0.33	NA	0.316494	0.2416	0.3909	0.232	0.3918	0.2751	0.25	0.38	0.29	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.088852	2.088852	NA	NA	NA	NA	0.377	NA	4.0917333
1243	3	120114637	120114637	C	T	UTR3	FSTL1	NM_007085:c.*1162G>A	NA	NA	UTR3	ENSG00000163430	ENST00000295633:c.*1162G>A	NA	NA	NA	NA	3q13.33	NA	NA	NA	NA	rs1700	0.08	0.08	0.087	0.0848642	0.1292	0.005	0.0778	0.1029	0.1022	0.11	0.0035	0.09	0.12	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.298153	1.298153	NA	0.112822	0.111272	NA	0.101	NA	4.0913114
1243	20	31598781	31598781	T	C	intronic	BPIFB2	NA	NA	NA	intronic	ENSG00000078898	NA	NA	NA	NA	NA	20q11.21	NA	Name=ZNF263	NA	NA	rs6120085	0.23	0.23	0.221	0.240815	0.328	0.1181	0.304	0.1846	0.3088	0.33	0.11	0.3	0.18	0.2869	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.231547	NA	NA	0.293837	0.211076	NA	0.333	NA	4.091263
1243	7	6874648	6874648	G	C	intergenic	CCZ1B,LOC100131257	dist=8722;dist=240753	NA	NA	intergenic	ENSG00000146574,ENSG00000155070	dist=8247;dist=20468	NA	NA	Score=352;Name=lod=36	NA	7p22.1	NA	NA	NA	NA	rs13233326	0.23	0.23	0.194	0.258986	0.2425	0.254	0.2176	0.2617	0.3067	0.22	0.21	0.21	0.26	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.165747	NA	NA	NA	NA	NA	0.188	NA	4.0908334
1243	3	183818511	183818511	A	G	intronic	HTR3E	NA	NA	NA	ncRNA_intronic	ENSG00000238020	NA	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs55683908	0.2	0.2	0.185	0.220248	0.2425	0.2411	0.3012	0.0787	0.3098	0.24	0.24	0.25	0.07	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.256956	NA	NA	NA	NA	NA	0.138	NA	4.0908333
1243	X	16709626	16709626	G	A	intronic	CTPS2	NA	NA	NA	intronic	ENSG00000047230	NA	NA	NA	NA	NA	Xp22.2	NA	NA	Name=2	NA	rs5980322	0.56	0.56	0.55087	NA	NA	NA	NA	NA	NA	0.42	0.43	0.56	0.92	0.4823	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.050764	NA	NA	0.427021	0.849283	NA	0.399	NA	4.090679
1243	3	16343092	16343092	T	G	intronic	OXNAD1	NA	NA	NA	intronic	ENSG00000154814	NA	NA	NA	NA	NA	3p25.1	NA	Name=Max	Name=7	NA	rs842283	0.69	0.69	0.694	0.715056	0.6322	0.6677	0.6427	0.8661	0.6963	0.62	0.71	0.64	0.83	0.6539	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.652822	1.652822	NA	0.623256	0.840218	NA	0.696	NA	4.090644
1243	14	107099715	107099715	C	T	intergenic	LINC00221,NONE	dist=148186;dist=NONE	NA	NA	upstream	ENSG00000253132	NA	NA	NA	Score=265;Name=lod=16	NA	14q32.33	NA	NA	NA	NA	rs10467897	0.48	0.48	0.432	0.575679	0.4095	0.5327	0.4496	0.705	0.7055	0.39	0.46	0.47	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.887519	2.887519	NA	NA	NA	ID=COSN393189;OCCURENCE=1(lung)	0.022	NA	4.0905
1243	8	126445544	126445544	C	A	intronic	TRIB1	NA	NA	NA	intronic	ENSG00000173334	NA	NA	NA	NA	NA	8q24.13	NA	NA	Name=7	NA	rs2235109	0.44	0.44	0.471	0.503594	0.2714	0.6538	0.2896	0.6104	0.5951	0.26	0.63	0.28	0.6	0.3734	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.524483	1.524483	NA	0.264767	0.575352	NA	0.457	NA	4.090433
1243	22	30125596	30125596	C	T	UTR3	CABP7	NM_182527:c.*38C>T	NA	NA	UTR3	ENSG00000100314	ENST00000216144:c.*38C>T	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs5997507	0.07	0.07	0.069	0.0936502	0.0696	0.0198	0.1066	0.1407	0.1217	0.08	0.02	0.09	0.11	0.0944	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.258112	NA	NA	0.079302	0.126192	NA	0.058	NA	4.0900314
1243	15	87531281	87531281	A	C	exonic	AGBL1	NA	synonymous SNV	AGBL1:NM_152336:exon23:c.A3147C:p.T1049T	exonic	ENSG00000166748	NA	synonymous SNV	ENSG00000166748:ENST00000389298:exon16:c.A2340C:p.T780T,ENSG00000166748:ENST00000421325:exon22:c.A3147C:p.T1049T,ENSG00000166748:ENST00000441037:exon23:c.A3147C:p.T1049T	NA	NA	15q25.3	NA	Name=USF-1	NA	NA	rs1006030	0.82	0.82	0.822	0.820687	0.8579	0.9187	0.7622	0.652	0.9509	0.86	0.91	0.78	0.7	0.858	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.238893	NA	NA	0.8609	0.685484	NA	0.688	NA	4.0898666
1243	1	171679958	171679958	G	A	intronic	VAMP4	NA	NA	NA	intronic	ENSG00000117533	NA	NA	NA	Score=660;Name=lod=641	NA	1q24.3	NA	NA	NA	NA	rs10913530	0.36	0.36	0.35	0.351038	0.2883	0.3829	0.2695	0.5083	0.228	0.27	0.36	0.27	0.55	0.3141	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.243285	NA	NA	0.307818	0.469133	NA	0.384	NA	4.089782
1243	10	50374819	50374819	T	C	intronic	C10orf128	NA	NA	NA	exonic	ENSG00000204161	NA	synonymous SNV	ENSG00000204161:ENST00000374156:exon3:c.A396G:p.Q132Q	NA	NA	10q11.23	NA	NA	NA	NA	rs9418839	0.36	0.36	0.333	0.390974	0.3519	0.4018	0.3674	0.3676	0.4683	0.36	0.35	0.3	0.41	0.3917	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011601	NA	NA	NA	NA	NA	0.297	NA	4.0897333
1243	11	27412535	27412535	C	T	intronic	LGR4	NA	NA	NA	intronic	ENSG00000205213	NA	NA	NA	NA	NA	11p14.1	NA	NA	Name=69	NA	rs12273521	0.83	0.83	0.803	0.819489	0.9105	0.9028	0.8948	0.5363	0.9693	0.91	0.92	0.86	0.57	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.143997	NA	NA	NA	NA	NA	0.775	NA	4.0895
1243	7	20685508	20685508	T	G	intronic	ABCB5	NA	NA	NA	intronic	ENSG00000004846	NA	NA	NA	Score=493;Name=lod=134	NA	7p21.1	NA	NA	NA	NA	rs11983326	0.3	0.3	0.3	0.322284	0.2992	0.1905	0.3055	0.4675	0.2975	0.3	0.19	0.3	0.43	0.3132	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.59487	1.59487	NA	0.299553	0.470344	NA	0.297	NA	4.088047
1243	17	8141324	8141324	T	C	intronic	CTC1	NA	NA	NA	intronic	ENSG00000178971	NA	NA	NA	NA	NA	17p13.1	NA	Name=CTCF	NA	NA	rs11655903	0.32	0.32	0.286	0.285942	0.2992	0.3313	0.4798	0.1815	0.229	0.3	0.4	0.43	0.17	0.308	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.744754	NA	NA	0.30506	0.184865	NA	0.225	NA	4.08774
1243	12	54651471	54651471	A	G	UTR5	CBX5	NM_001127322:c.-37T>C,NM_001127321:c.-37T>C,NM_012117:c.-37T>C	NA	NA	UTR5	ENSG00000094916	ENST00000209875:c.-37T>C,ENST00000439541:c.-37T>C,ENST00000550411:c.-37T>C,ENST00000552562:c.-37T>C	NA	NA	Score=692;Name=lod=864	NA	12q13.13	NA	NA	NA	NA	rs1140681	0.55	0.55	0.558	0.579872	0.3897	0.496	0.5115	0.8003	0.6125	0.39	0.55	0.52	0.82	0.4707	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.60609	1.60609	NA	0.385233	0.756922	NA	0.529	NA	4.0877004
1243	11	64622869	64622869	G	C	exonic	EHD1	NA	synonymous SNV	EHD1:NM_006795:exon4:c.C1005G:p.L335L	exonic	ENSG00000110047	NA	synonymous SNV	ENSG00000110047:ENST00000320631:exon4:c.C1005G:p.L335L,ENSG00000110047:ENST00000421510:exon4:c.C597G:p.L199L,ENSG00000110047:ENST00000433803:exon5:c.C1047G:p.L349L,ENSG00000110047:ENST00000359393:exon6:c.C1005G:p.L335L	Score=631;Name=lod=489	NA	11q13.1	NA	NA	NA	NA	rs10897533	0.7	0.7	0.674	0.696086	0.8797	0.5625	0.8256	0.5076	0.8078	0.89	0.55	0.81	0.49	0.8206	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.112168	NA	NA	0.878753	0.585643	NA	0.768	NA	4.0876136
1243	13	44411410	44411410	G	A	UTR3	CCDC122	NM_144974:c.*6C>T	NA	NA	UTR3	ENSG00000151773	ENST00000444614:c.*6C>T	NA	NA	NA	NA	13q14.11	NA	NA	NA	NA	rs66964055	0.06	0.06	0.064	0.0615016	0.0885	NA	0.0764	0.1036	0.0297	0.08	NA	0.07	0.12	0.0678	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.866815	NA	NA	0.08943	0.106069	NA	0.065	NA	4.0876034
1243	5	14711275	14711275	T	C	UTR3	ANKH	NM_054027:c.*31A>G	NA	NA	UTR3	ENSG00000154122	ENST00000535119:c.*31A>G,ENST00000284268:c.*31A>G	NA	NA	NA	NA	5p15.2	NA	NA	NA	NA	rs3045	0.06	0.06	0.065	0.0577077	0.0855	NA	0.0533	0.115	0.0143	0.08	NA	0.04	0.1	0.0703	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.87172	2.87172	NA	0.09	0.111212	NA	0.145	NA	4.0875334
1243	1	15844615	15844615	A	G	exonic	CASP9	NA	synonymous SNV	CASP9:NM_001229:exon2:c.T408C:p.F136F,CASP9:NM_032996:exon2:c.T159C:p.F53F	exonic	ENSG00000132906	NA	synonymous SNV	ENSG00000132906:ENST00000333868:exon2:c.T408C:p.F136F,ENSG00000132906:ENST00000348549:exon2:c.T408C:p.F136F,ENSG00000132906:ENST00000375890:exon2:c.T159C:p.F53F,ENSG00000132906:ENST00000440484:exon2:c.T408C:p.F136F,ENSG00000132906:ENST00000447522:exon2:c.T159C:p.F53F,ENSG00000132906:ENST00000546424:exon2:c.T408C:p.F136F	NA	NA	1p36.21	NA	NA	NA	NA	rs1132312	0.6	0.6	0.608	0.584864	0.5149	0.6538	0.4986	0.739	0.4387	0.54	0.63	0.5	0.74	0.5365	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.271714	NA	NA	0.52814	0.703359	ID=COSM146414;OCCURENCE=1(stomach)	0.449	NA	4.0871266
1243	2	170550839	170550839	A	G	UTR5	CCDC173	NM_001085447:c.-2T>C	NA	NA	UTR5	ENSG00000154479	ENST00000447353:c.-2T>C,ENST00000421028:c.-19292T>C	NA	NA	NA	NA	2q31.1	NA	Name=HMGN3,GABP,ELK4,FOXA1_(C-20),E2F4,FOSL2,eGFP-JunD,KAP1,Sin3Ak-20,BRCA1_(C-1863),HA-E2F1,Mxi1_(bHLH),RFX5_(N-494),Pol2,Rad21,ELF1_(SC-631),Max,TBP,CTCF	NA	NA	rs3820952	0.35	0.35	0.351	0.34984	0.4195	0.2093	0.281	0.4312	0.362	0.42	0.19	0.33	0.43	0.3914	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.559722	1.559722	NA	0.435383	0.420151	NA	0.42	NA	4.0870504
1243	19	41271104	41271104	T	C	UTR3	SNRPA	NM_004596:c.*32T>C	NA	NA	UTR3	ENSG00000077312	ENST00000243563:c.*32T>C	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs13108	0.16	0.16	0.134	0.146565	0.0726	0.2073	0.0706	0.2632	0.0562	0.07	0.23	0.09	0.26	0.1079	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.320745	NA	NA	0.066512	0.217885	NA	0.13	NA	4.0863214
1243	15	83334419	83334419	T	C	ncRNA_intronic	LOC283692	NA	NA	NA	ncRNA_intronic	ENSG00000259462	NA	NA	NA	NA	NA	15q25.2	NA	NA	NA	NA	rs7494860	0.53	0.53	0.498	0.503395	0.5805	0.5337	0.598	0.3623	0.5164	0.57	0.55	0.59	0.4	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.820379	NA	NA	NA	NA	ID=COSN165014;OCCURENCE=1(breast)	0.558	NA	4.0861666
1243	6	160199687	160199687	T	C	UTR3	TCP1	NM_001008897:c.*390A>G,NM_030752:c.*390A>G	NA	NA	UTR3	ENSG00000120438	ENST00000321394:c.*390A>G	NA	NA	NA	NA	6q25.3	NA	Name=FOXA1_(SC-101058),FOXA2_(SC-6554),Pol2,FOXA1_(C-20),Pol2-4H8	Name=5	NA	rs15982	0.67	0.67	0.63	0.679313	0.7565	0.5903	0.8314	0.5348	0.7791	0.76	0.57	0.82	0.54	0.7416	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.701744	1.701744	NA	0.74907	0.553563	NA	0.529	NA	4.0861634
1243	20	45891189	45891189	T	C	intronic	ZMYND8	NA	NA	NA	intronic	ENSG00000101040	NA	NA	NA	NA	NA	20q13.12	NA	Name=YY1	NA	NA	rs2294560	0.25	0.25	0.241	0.199081	0.3211	0.2321	0.2305	0.1362	0.1022	0.33	0.23	0.26	0.12	0.2725	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.370716	NA	NA	0.320465	0.163187	ID=COSN166551;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.326	NA	4.085935
1243	3	64553963	64553963	T	C	intronic	ADAMTS9	NA	NA	NA	ncRNA_intronic	ENSG00000241158	NA	NA	NA	NA	NA	3p14.1	NA	NA	NA	NA	rs9836795	0.14	0.14	0.122	0.0992412	0.2475	NA	0.1571	0.0499	0.0746	0.25	NA	0.21	0.07	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.238822	NA	NA	NA	NA	NA	0.174	NA	4.0858333
1243	2	128409338	128409338	C	A	UTR3	GPR17	NM_001161415:c.*9C>A,NM_005291:c.*9C>A,NM_001161417:c.*9C>A,NM_001161416:c.*9C>A	NA	NA	UTR3	ENSG00000144230	ENST00000544369:c.*9C>A,ENST00000272644:c.*9C>A	NA	NA	NA	NA	2q14.3	NA	NA	NA	NA	rs34415489	0.08	0.08	NA	0.129193	0.1093	0.1171	0.0908	0.0295	0.3241	0.1	0.12	0.07	0.03	0.1385	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.138896	NA	NA	NA	NA	NA	NA	NA	4.0855334
1243	11	3439475	3439475	A	G	intergenic	LOC650368,TRPC2	dist=9097;dist=208215	NA	NA	ncRNA_exonic	ENSG00000166492	NA	NA	NA	Score=340;Name=lod=32	NA	11p15.4	NA	NA	NA	NA	rs10767027	0.81	0.81	0.892	0.882987	0.9145	0.997	0.8847	0.7481	0.9141	0.82	0.92	0.81	0.66	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.125128	NA	NA	NA	NA	NA	0.196	NA	4.0855
1243	2	128409337	128409337	G	C	UTR3	GPR17	NM_001161415:c.*8G>C,NM_005291:c.*8G>C,NM_001161417:c.*8G>C,NM_001161416:c.*8G>C	NA	NA	UTR3	ENSG00000144230	ENST00000544369:c.*8G>C,ENST00000272644:c.*8G>C	NA	NA	NA	NA	2q14.3	NA	NA	NA	NA	rs35201354	0.08	0.08	NA	0.129193	0.1093	0.1171	0.0908	0.0295	0.3241	0.1	0.12	0.07	0.03	0.1386	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.738015	NA	NA	NA	NA	NA	NA	NA	4.0854334
1243	2	38916906	38916906	T	C	intronic	GALM	NA	NA	NA	intronic	ENSG00000143891	NA	NA	NA	NA	NA	2p22.1	NA	Name=MafF_(M8194)	NA	NA	rs11687518	0.21	0.21	0.183	0.202276	0.3121	0.1875	0.2968	0.0477	0.2464	0.3	0.15	0.29	0.06	0.2877	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.350622	NA	NA	0.314884	0.107581	NA	0.355	NA	4.085316
1243	14	103931879	103931879	A	G	intronic	MARK3	NA	NA	NA	intronic	ENSG00000075413	NA	NA	NA	Score=558;Name=lod=246	NA	14q32.32	NA	NA	NA	NA	rs1116095	0.37	0.37	0.362	0.420927	0.2922	0.4762	0.3602	0.4387	0.5153	0.28	0.48	0.31	0.43	0.3505	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.805903	2.805903	NA	0.272126	0.415296	NA	0.406	NA	4.085174
1244	19	58929222	58929222	G	A	UTR3	ZNF584	NM_173548:c.*71G>A	NA	NA	UTR3	ENSG00000171574	ENST00000306910:c.*71G>A,ENST00000593920:c.*71G>A,ENST00000599238:c.*1068G>A	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs3764532	0.15	0.15	0.165	0.146565	0.2485	0.0546	0.1744	0.1059	0.1718	0.23	0.06	0.18	0.12	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.416808	NA	NA	NA	NA	NA	0.174	NA	4.0848334
1244	22	37578807	37578807	G	A	intronic	C1QTNF6	NA	NA	NA	exonic	ENSG00000133466	NA	synonymous SNV	ENSG00000133466:ENST00000255836:exon1:c.C39T:p.S13S	NA	NA	22q12.3	NA	NA	NA	NA	rs229520	0.35	0.35	0.343	0.341054	0.2137	0.4643	0.2003	0.5015	0.228	0.22	0.5	0.21	0.48	0.3612	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.212786	NA	NA	0.174341	0.37973	NA	0.37	NA	4.0840923
1244	6	116263524	116263524	G	A	UTR3	FRK	NM_002031:c.*53C>T	NA	NA	UTR3	ENSG00000111816	ENST00000606080:c.*53C>T	NA	NA	NA	NA	6q22.1	NA	NA	NA	NA	rs12208531	0.12	0.12	0.118	0.086262	0.2495	0.005	0.1916	0.0166	0.0215	0.23	0.01	0.23	0.02	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.939343	NA	NA	NA	NA	NA	0.152	NA	4.0838334
1244	19	55512137	55512137	C	A	exonic	NLRP2	NA	synonymous SNV	NLRP2:NM_001174082:exon12:c.C2994A:p.I998I,NLRP2:NM_001174081:exon13:c.C3060A:p.I1020I,NLRP2:NM_017852:exon13:c.C3060A:p.I1020I,NLRP2:NM_001174083:exon14:c.C2991A:p.I997I	exonic	ENSG00000022556	NA	synonymous SNV	ENSG00000022556:ENST00000339757:exon12:c.C2994A:p.I998I,ENSG00000022556:ENST00000391721:exon12:c.C2988A:p.I996I,ENSG00000022556:ENST00000537859:exon12:c.C2994A:p.I998I,ENSG00000022556:ENST00000538819:exon12:c.C2988A:p.I996I,ENSG00000022556:ENST00000263437:exon13:c.C3051A:p.I1017I,ENSG00000022556:ENST00000448584:exon13:c.C3060A:p.I1020I,ENSG00000022556:ENST00000543010:exon13:c.C3060A:p.I1020I,ENSG00000022556:ENST00000427260:exon14:c.C2991A:p.I997I	NA	NA	19q13.42	NA	NA	NA	NA	rs12768	0.56	0.56	0.55	0.550519	0.495	0.6815	0.6686	0.4486	0.5266	0.48	0.72	0.58	0.47	0.5568	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.305378	NA	NA	0.531279	0.463913	NA	0.594	NA	4.0835876
1244	17	6546259	6546259	T	C	intronic	TXNDC17	NA	NA	NA	intronic	ENSG00000129235	NA	NA	NA	Score=589;Name=lod=331	NA	17p13.1	NA	Name=CEBPB	NA	NA	rs2285999	0.71	0.71	0.709	0.716054	0.6531	0.6448	0.6081	0.9251	0.6483	0.67	0.69	0.59	0.9	0.6402	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.074052	NA	NA	0.62314	0.861325	NA	0.754	NA	4.08356
1244	2	47693959	47693959	G	A	intronic	MSH2	NA	NA	NA	intronic	ENSG00000095002	NA	NA	NA	NA	NA	2p21	NA	NA	NA	NA	rs3732183	0.47	0.47	0.49	0.483427	0.3012	0.6548	0.3242	0.6725	0.3517	0.31	0.61	0.3	0.67	0.3501	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.387367	NA	NA	0.265759	0.599318	NA	0.391	CLINSIG=non-pathogenic|non-pathogenic|non-pathogenic;CLNDBN=Lynch_syndrome|not_specified|Neoplastic_Syndromes\x2c_Hereditary;CLNREVSTAT=exp|mult|single;CLNACC=RCV000030241.2|RCV000035358.2|RCV000132147.1;CLNDSDB=GeneReviews:MedGen:SNOMED_CT|.|MedGen;CLNDSDBID=NBK1211:C0009405:315058005|.|C0027672	4.082941
1244	13	113536467	113536467	G	A	UTR3	ATP11A	NM_015205:c.*287G>A,NM_032189:c.*89G>A	NA	NA	UTR3	ENSG00000068650	ENST00000375645:c.*287G>A,ENST00000375630:c.*89G>A,ENST00000487903:c.*350G>A,ENST00000471555:c.*768G>A,ENST00000419631:c.*89G>A,ENST00000415301:c.*289G>A	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs36048052	0.15	0.15	0.116	0.146366	0.2505	0.0357	0.281	0.0893	0.135	0.22	0.03	0.25	0.1	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.144871	NA	NA	NA	NA	NA	0.101	NA	4.0828334
1244	15	25331556	25331556	A	G	upstream;downstream	SNORD116-17,SNORD116-19;SNORD116-18	NA	NA	NA	ncRNA_intronic	ENSG00000224078	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs4371131	0.14	0.14	0.161	0.171526	0.0845	0.002	0.0865	0.4992	0.0532	0.08	0.0017	0.07	0.45	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.501775	NA	NA	NA	NA	NA	0.138	NA	4.0821666
1244	10	135351362	135351362	T	C	exonic	CYP2E1	NA	synonymous SNV	CYP2E1:NM_000773:exon8:c.T1263C:p.F421F	exonic	ENSG00000130649	NA	synonymous SNV	ENSG00000130649:ENST00000418356:exon6:c.T852C:p.F284F,ENSG00000130649:ENST00000421586:exon7:c.T1002C:p.F334F,ENSG00000130649:ENST00000252945:exon8:c.T1263C:p.F421F,ENSG00000130649:ENST00000463117:exon10:c.T1263C:p.F421F	Score=389;Name=lod=51	NA	10q26.3	NA	NA	NA	NA	rs2515641	0.73	0.73	0.698	0.700879	0.8718	0.7946	0.8213	0.3389	0.8323	0.88	0.81	0.82	0.34	0.8302	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.901559	NA	NA	0.882674	0.397186	NA	0.739	NA	4.0819926
1244	19	10748820	10748820	T	C	intronic	SLC44A2	NA	NA	NA	intronic	ENSG00000129353	NA	NA	NA	NA	NA	19p13.2	NA	Name=Egr-1	Name=4	NA	rs3859514	0.65	0.65	0.624	0.677716	0.5964	0.6538	0.7666	0.7421	0.636	0.6	0.61	0.73	0.73	0.6758	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.523348	NA	NA	0.646279	0.721062	NA	0.587	NA	4.081521
1244	1	235715523	235715523	A	G	exonic	GNG4	NA	synonymous SNV	GNG4:NM_004485:exon3:c.T114C:p.A38A,GNG4:NM_001098721:exon4:c.T114C:p.A38A,GNG4:NM_001098722:exon4:c.T114C:p.A38A	exonic	ENSG00000168243	NA	synonymous SNV	ENSG00000168243:ENST00000366597:exon3:c.T114C:p.A38A,ENSG00000168243:ENST00000366598:exon3:c.T114C:p.A38A,ENSG00000168243:ENST00000391854:exon4:c.T114C:p.A38A,ENSG00000168243:ENST00000450593:exon4:c.T114C:p.A38A	NA	NA	1q42.3	NA	NA	NA	NA	rs14326	0.62	0.62	0.576	0.63119	0.495	0.8383	0.6599	0.5893	0.5941	0.51	0.81	0.6	0.58	0.5815	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.937828	NA	NA	0.508837	0.598275	NA	0.725	NA	4.0813296
1244	13	28403109	28403109	C	T	intergenic	GSX1,PDX1	dist=35020;dist=91059	NA	NA	downstream	ENSG00000207330	NA	NA	NA	Score=646;Name=lod=562	NA	13q12.2	NA	NA	NA	NA	rs1891950	0.45	0.45	0.396	0.470847	0.4195	0.5546	0.6023	0.3011	0.5736	0.41	0.56	0.55	0.31	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.385152	1.385152	NA	NA	NA	NA	0.377	NA	4.0805
1244	19	14817548	14817548	T	A	exonic	ZNF333	NA	synonymous SNV	ZNF333:NM_032433:exon7:c.T474A:p.T158T	exonic	ENSG00000160961	NA	nonsynonymous SNV	ENSG00000160961:ENST00000601134:exon5:c.T295A:p.S99T	NA	NA	19p13.12	NA	NA	NA	NA	rs6511961	0.76	0.76	0.777	0.829473	0.6223	0.8889	0.7046	0.9675	0.8834	0.64	0.85	0.65	0.94	0.695	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.150459	NA	NA	0.602674	0.908534	NA	0.725	NA	4.080026
1244	3	100170553	100170553	G	A	intronic	LNP1	NA	NA	NA	exonic	ENSG00000206535	NA	synonymous SNV	ENSG00000206535:ENST00000489752:exon3:c.G186A:p.L62L	NA	NA	3q12.2	NA	NA	NA	NA	rs7641299	0.16	0.16	0.175	0.14976	0.2624	0.131	0.134	0.0333	0.2219	0.27	0.15	0.14	0.04	0.2307	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.312745	1.312745	NA	0.260215	0.070655	NA	0.203	NA	4.0800183
1244	9	139324029	139324029	C	T	UTR3	INPP5E	NM_019892:c.*98G>A	NA	NA	UTR3	ENSG00000148384	ENST00000371712:c.*98G>A	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs35873563	0.16	0.16	0.162	0.148363	0.2535	0.0427	0.3026	0.0408	0.1851	0.27	0.06	0.26	0.05	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.220259	NA	NA	NA	NA	NA	0.13	NA	4.0798334
1244	4	88261828	88261828	A	C	intronic	HSD17B11	NA	NA	NA	ncRNA_intronic	ENSG00000255723	NA	NA	NA	NA	NA	4q22.1	NA	NA	NA	NA	rs7679024	0.17	0.17	0.147	0.165136	0.2535	0.0923	0.3069	0.0189	0.2464	0.26	0.1	0.27	0.03	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.253522	NA	NA	NA	NA	NA	0.109	NA	4.0798333
1244	5	162910438	162910438	G	A	intronic	HMMR	NA	NA	NA	ncRNA_intronic	ENSG00000251018	NA	NA	NA	NA	NA	5q34	NA	NA	NA	NA	rs299308	0.19	0.19	0.177	0.208666	0.2535	0.0724	0.1772	0.2678	0.2454	0.25	0.05	0.2	0.24	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.229685	NA	NA	NA	NA	NA	0.225	NA	4.0798333
1244	14	88737193	88737193	T	C	UTR5	KCNK10	NM_138318:c.-60A>G	NA	NA	UTR5	ENSG00000100433	ENST00000312350:c.-60A>G	NA	NA	NA	NA	14q31.3	NA	NA	Name=4	NA	rs1298237	0.76	0.76	0.755	0.751797	0.6342	0.9236	0.7435	0.7262	0.7362	0.65	0.94	0.77	0.71	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.033887	NA	NA	0.619422	0.67052	NA	0.652	NA	4.0797114
1244	2	36704144	36704144	C	T	exonic	CRIM1	NA	synonymous SNV	CRIM1:NM_016441:exon6:c.C1104T:p.T368T	exonic	ENSG00000150938	NA	synonymous SNV	ENSG00000150938:ENST00000280527:exon6:c.C1104T:p.T368T	NA	NA	2p22.2	NA	NA	NA	NA	rs848547	0.6	0.6	0.57	0.613618	0.499	0.6766	0.7378	0.5045	0.726	0.5	0.71	0.71	0.54	0.5731	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.389574	1.389574	NA	0.514884	0.517476	NA	0.674	NA	4.0796826
1244	11	10506259	10506259	A	G	intronic	AMPD3	NA	NA	NA	intronic	ENSG00000133805	NA	NA	NA	NA	NA	11p15.4	NA	Name=MafK_(SC-477),MafF_(M8194),MafK_(ab50322)	NA	NA	rs7128132	0.94	0.94	0.951	0.944289	0.9205	0.9563	0.964	0.9372	0.9519	0.92	0.97	0.95	0.93	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.825089	NA	NA	NA	NA	NA	0.957	NA	4.0795
1244	10	45423282	45423282	C	G	ncRNA_intronic	TMEM72-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000224812	NA	NA	NA	NA	NA	10q11.21	NA	NA	NA	NA	rs10900131	0.45	0.45	0.418	0.432308	0.5875	0.3214	0.6037	0.3623	0.3599	0.58	0.27	0.61	0.35	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.417918	NA	NA	NA	NA	ID=COSN163639;OCCURENCE=1(NS)	0.486	NA	4.0791666
1244	22	30766179	30766179	C	T	ncRNA_exonic	KIAA1656	NA	NA	NA	intronic	ENSG00000187860	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs7287908	0.17	0.17	0.188	0.153355	0.2545	0.1458	0.1571	0.1324	0.0828	0.24	0.12	0.16	0.14	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.341172	NA	NA	NA	NA	NA	0.275	NA	4.0788333
1244	22	30767536	30767536	T	G	ncRNA_exonic	KIAA1656	NA	NA	NA	intronic	ENSG00000187860	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs11705092	0.17	0.17	0.157	0.153554	0.2545	0.1458	0.1571	0.1331	0.0828	0.24	0.12	0.16	0.14	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.389567	NA	NA	NA	NA	NA	0.268	NA	4.0788333
1244	22	30767781	30767781	C	T	ncRNA_exonic	KIAA1656	NA	NA	NA	intronic	ENSG00000187860	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs1076299	0.17	0.17	0.17	0.153355	0.2545	0.1458	0.1571	0.1324	0.0828	0.24	0.12	0.16	0.14	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.422717	NA	NA	NA	NA	NA	0.275	NA	4.0788333
1244	14	21631557	21631557	A	G	intergenic	OR5AU1,LINC00641	dist=7373;dist=36681	NA	NA	ncRNA_exonic	ENSG00000259102	NA	NA	NA	Score=795;Name=lod=2266	NA	14q11.2	NA	NA	NA	NA	rs10138782	0.92	0.92	0.914	0.921725	0.9215	0.9524	0.9539	0.8638	0.9458	0.92	0.96	0.95	0.87	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.355479	NA	NA	NA	NA	NA	0.928	NA	4.0785
1244	16	81077915	81077915	T	C	exonic	ATMIN	NA	synonymous SNV	ATMIN:NM_015251:exon4:c.T1812C:p.A604A	exonic	ENSG00000166454	NA	synonymous SNV	ENSG00000166454:ENST00000566488:exon3:c.T1344C:p.A448A,ENSG00000166454:ENST00000299575:exon4:c.T1812C:p.A604A,ENSG00000166454:ENST00000564241:exon4:c.T1344C:p.A448A	Score=510;Name=lod=158	NA	16q23.2	NA	NA	NA	NA	rs2257378	0.71	0.71	0.676	0.702676	0.8738	0.7202	0.8271	0.3608	0.8824	0.87	0.72	0.82	0.39	0.8206	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.648475	NA	NA	0.893837	0.450954	NA	0.783	NA	4.0784296
1244	10	103587552	103587552	G	A	ncRNA_intronic	LOC100289509	NA	NA	NA	ncRNA_intronic	ENSG00000226009	NA	NA	NA	NA	NA	10q24.32	NA	NA	NA	NA	rs2305189	0.28	0.28	0.271	0.26897	0.1879	0.5079	0.1931	0.1891	0.2679	0.18	0.54	0.23	0.18	0.2214	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.843281	NA	NA	0.178953	0.185656	NA	0.312	NA	4.0784136
1244	10	23482850	23482850	G	A	UTR3	PTF1A	NM_178161:c.*15G>A	NA	NA	UTR3	ENSG00000168267	ENST00000376504:c.*15G>A	NA	NA	NA	NA	10p12.2	NA	NA	NA	NA	rs10828415	0.24	0.24	0.219	0.212859	0.0775	0.6895	0.1354	0.087	0.0859	0.08	0.67	0.13	0.05	0.1277	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.268353	NA	NA	0.049884	0.075579	NA	0.159	NA	4.0782494
1244	5	160097632	160097632	G	A	exonic	ATP10B	NA	synonymous SNV	ATP10B:NM_025153:exon7:c.C513T:p.R171R	exonic	ENSG00000118322	NA	synonymous SNV	ENSG00000118322:ENST00000327245:exon7:c.C513T:p.R171R	NA	NA	5q34	Score=883;Name=V$ELK1_01	NA	NA	NA	rs958911	0.87	0.87	0.888	0.877596	0.8658	0.8929	0.7363	0.9327	0.8998	0.88	0.9	0.77	0.91	0.8565	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.425667	NA	NA	0.866397	0.931358	NA	0.913	NA	4.0779696
1244	14	21388397	21388397	C	T	downstream	ECRP	NA	NA	NA	ncRNA_exonic	ENSG00000136315	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs12147654	0.05	0.05	0.05	0.0365415	0.0895	NA	0.0533	0.0076	0.047	0.1	NA	0.07	0.02	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.373619	NA	NA	NA	NA	NA	0.022	NA	4.0771666
1244	15	81598225	81598225	C	A	intronic	IL16	NA	NA	NA	ncRNA_intronic	ENSG00000271725	NA	NA	NA	NA	NA	15q25.1	NA	NA	NA	NA	rs17875533	0.15	0.15	0.151	0.144569	0.0746	0.1637	0.1614	0.2337	0.0644	0.07	0.19	0.14	0.24	0.0982	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.401428	NA	NA	0.083488	0.192465	NA	0.203	NA	4.0770453
1244	5	176721198	176721198	T	C	exonic	NSD1	NA	synonymous SNV	NSD1:NM_022455:exon23:c.T6829C:p.L2277L,NSD1:NM_172349:exon24:c.T6022C:p.L2008L	exonic	ENSG00000165671	NA	synonymous SNV	ENSG00000165671:ENST00000361032:exon20:c.T6520C:p.L2174L,ENSG00000165671:ENST00000439151:exon23:c.T6829C:p.L2277L,ENSG00000165671:ENST00000347982:exon24:c.T6022C:p.L2008L,ENSG00000165671:ENST00000354179:exon24:c.T6022C:p.L2008L	NA	NA	5q35.3	NA	NA	NA	NA	rs28580074	0.77	0.77	0.773	0.771366	0.8807	0.4871	0.7839	0.9251	0.7352	0.88	0.49	0.8	0.92	0.8242	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.386657	NA	NA	0.884767	0.926691	ID=COSM150019;OCCURENCE=1(stomach)	0.819	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000082138.1|RCV000127260.1;CLNDSDB=.|.;CLNDSDBID=.|.	4.0769996
1244	19	59067623	59067623	C	T	intronic	UBE2M	NA	NA	NA	exonic	ENSG00000130725	NA	synonymous SNV	ENSG00000130725:ENST00000596985:exon4:c.G294A:p.L98L	NA	NA	19q13.43	NA	NA	NA	NA	rs2305119	0.33	0.33	0.361	0.367212	0.2634	0.1627	0.366	0.6452	0.3098	0.25	0.15	0.32	0.66	0.2779	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.493508	1.493508	NA	0.215116	0.59714	NA	0.399	NA	4.0769173
1244	5	75996865	75996865	A	G	intronic	IQGAP2	NA	NA	NA	ncRNA_intronic	ENSG00000225407	NA	NA	NA	NA	NA	5q13.3	NA	NA	NA	NA	rs468648	0.19	0.19	0.19	0.155351	0.0765	0.4147	0.1009	0.1263	0.047	0.07	0.42	0.11	0.14	0.0998	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.438597	NA	NA	0.080349	0.125511	NA	0.094	NA	4.0766843
1244	19	43865928	43865928	C	A	intronic	CD177	NA	NA	NA	ncRNA_intronic	ENSG00000272396	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs60356825	0.29	0.29	0.228	0.288339	0.2575	0.5417	0.3401	0.0242	0.3793	0.27	0.53	0.29	0.04	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.411443	NA	NA	NA	NA	NA	0.275	NA	4.0758333
1244	19	14517594	14517594	C	T	intronic	CD97	NA	NA	NA	ncRNA_intronic	ENSG00000267379	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs74937637	0.08	0.08	0.054	0.0730831	0.0855	0.0625	0.1758	0.0129	0.0798	0.09	0.06	0.16	0.03	0.0859	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.323407	NA	NA	0.086163	0.023831	NA	0.065	NA	4.0757703
1244	19	35613623	35613623	G	A	intronic	FXYD3	NA	NA	NA	exonic	ENSG00000089356	NA	nonsynonymous SNV	ENSG00000089356:ENST00000604804:exon5:c.G139A:p.E47K,ENSG00000089356:ENST00000603524:exon6:c.G139A:p.E47K	NA	NA	19q13.12	NA	NA	NA	NA	rs1688017	0.3	0.3	0.293	0.34345	0.3698	0.254	0.2493	0.2958	0.5399	0.38	0.23	0.23	0.32	0.3644	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.380638	NA	NA	0.356744	0.316841	NA	0.37	NA	4.0757227
1244	1	31501755	31501755	T	C	intronic	PUM1	NA	NA	NA	intronic	ENSG00000134644	NA	NA	NA	Score=265;Name=lod=16	NA	1p35.2	NA	NA	NA	NA	rs4949331	0.22	0.22	0.213	0.223442	0.2942	0.0288	0.3386	0.2579	0.2229	0.29	0.02	0.32	0.27	0.3018	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.815493	1.815493	NA	0.328488	0.270767	NA	0.304	NA	4.075512
1244	17	20334398	20334398	G	A	intergenic	CCDC144CP,LGALS9B	dist=28894;dist=18778	NA	NA	downstream	ENSG00000189423	NA	NA	NA	Score=686;Name=lod=817	NA	17p11.2	NA	NA	NA	NA	rs2694201	0.21	0.21	0.14	0.179712	0.4245	0.0169	0.3285	0.028	0.1953	0.4	0.01	0.35	0.03	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.773629	NA	NA	NA	NA	NA	0.029	NA	4.0755
1244	18	7017322	7017322	A	G	exonic	LAMA1	NA	synonymous SNV	LAMA1:NM_005559:exon20:c.T2763C:p.C921C	exonic	ENSG00000101680	NA	synonymous SNV	ENSG00000101680:ENST00000389658:exon20:c.T2763C:p.C921C	NA	NA	18p11.31	NA	NA	NA	NA	rs539713	0.54	0.54	0.564	0.547524	0.5368	0.2262	0.4135	0.9168	0.4857	0.55	0.26	0.43	0.9	0.5194	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.852884	NA	NA	0.535	0.841353	NA	0.551	NA	4.0754666
1244	14	24632828	24632828	G	T	intronic	IRF9	NA	NA	NA	UTR3	ENSG00000213928	ENST00000560852:c.*409G>T	NA	NA	NA	NA	14q12	NA	NA	NA	NA	rs3742501	0.16	0.16	0.153	0.165735	0.0915	0.0933	0.0836	0.3396	0.1401	0.09	0.12	0.09	0.36	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.060653	NA	NA	NA	NA	NA	0.196	NA	4.0751667
1244	6	29718578	29718578	C	G	downstream	IFITM4P	NA	NA	NA	ncRNA_exonic	ENSG00000235821	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs3823318	0.14	0.14	0.145	0.163738	0.0915	0.2659	0.0793	0.1384	0.227	0.09	0.27	0.07	0.13	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.050001	NA	NA	NA	NA	NA	0.167	NA	4.0751666
1245	8	143993315	143993315	C	T	UTR3	CYP11B2	NM_000498:c.*81G>A	NA	NA	UTR3	ENSG00000179142	ENST00000323110:c.*81G>A	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs3097	0.14	0.14	0.14	0.132188	0.2584	0.0526	0.1513	0.0189	0.2239	0.26	0.05	0.18	0.03	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.188746	NA	NA	NA	NA	NA	0.109	NA	4.0749334
1245	3	39450065	39450065	C	T	intronic	RPSA	NA	NA	NA	intronic	ENSG00000168028	NA	NA	NA	NA	NA	3p22.1	NA	Name=Pol2-4H8,Pol2	NA	NA	rs3772138	0.26	0.26	0.244	0.250799	0.3082	0.2778	0.3084	0.152	0.2566	0.3	0.28	0.3	0.14	0.2928	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.347059	1.347059	NA	0.324302	0.166364	NA	0.225	NA	4.074698
1245	6	100896569	100896569	T	G	intronic	SIM1	NA	NA	NA	intronic	ENSG00000112246	NA	NA	NA	NA	NA	6q16.3	NA	Name=SUZ12	NA	NA	rs3734353	0.35	0.35	0.329	0.314497	0.3191	0.4306	0.4092	0.2526	0.2065	0.33	0.45	0.38	0.26	0.3127	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.898072	NA	NA	0.293605	0.261689	NA	0.348	NA	4.074595
1245	12	109629457	109629457	C	T	exonic	ACACB	NA	synonymous SNV	ACACB:NM_001093:exon13:c.C2184T:p.G728G	exonic	ENSG00000076555	NA	synonymous SNV	ENSG00000076555:ENST00000377848:exon13:c.C2184T:p.G728G,ENSG00000076555:ENST00000377854:exon13:c.C2184T:p.G728G,ENSG00000076555:ENST00000338432:exon14:c.C2184T:p.G728G	NA	NA	12q24.11	NA	NA	NA	NA	rs7135947	0.39	0.39	0.366	0.38139	0.5666	0.2589	0.5677	0.2231	0.3988	0.55	0.24	0.52	0.21	0.4891	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.121794	NA	NA	0.536628	0.266228	NA	0.348	NA	4.0743386
1245	22	41615376	41615376	C	T	intronic	L3MBTL2	NA	NA	NA	intronic	ENSG00000100395	NA	NA	NA	NA	NA	22q13.2	NA	Name=ZNF263	NA	NA	rs2273085	0.35	0.35	0.303	0.370008	0.3082	0.4117	0.4755	0.3094	0.3978	0.31	0.34	0.48	0.33	0.3371	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.218042	NA	NA	0.280465	0.278484	NA	0.42	NA	4.074235
1245	12	20903757	20903757	T	C	exonic	SLCO1C1	NA	synonymous SNV	SLCO1C1:NM_001145944:exon12:c.T1593C:p.H531H,SLCO1C1:NM_001145946:exon15:c.T1947C:p.H649H	exonic	ENSG00000139155	NA	synonymous SNV	ENSG00000139155:ENST00000545102:exon12:c.T1593C:p.H531H,ENSG00000139155:ENST00000381552:exon14:c.T1947C:p.H649H,ENSG00000139155:ENST00000545604:exon15:c.T1947C:p.H649H	NA	NA	12p12.2	NA	NA	NA	NA	rs10841611	0.48	0.48	0.441	0.477436	0.504	0.5913	0.5735	0.1952	0.6462	0.52	0.63	0.54	0.22	0.5397	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.18388	NA	NA	0.54907	0.243305	NA	0.558	NA	4.0738966
1245	8	38853983	38853983	C	A	UTR5	TM2D2	NM_031940:c.-961G>T,NM_078473:c.-25G>T,NM_001024381:c.-961G>T,NM_001024380:c.-961G>T	NA	NA	UTR5	ENSG00000169490	ENST00000412303:c.-961G>T,ENST00000456397:c.-25G>T,ENST00000456845:c.-961G>T,ENST00000397070:c.-961G>T,ENST00000517872:c.-961G>T	NA	NA	NA	NA	8p11.22	NA	Name=Pol2(b),Pol2-4H8,Sin3Ak-20,RFX5_(N-494),MafK_(ab50322),HEY1,NFKB,AP-2gamma,CCNT2,c-Myc,TBP,Nrf1,HMGN3,MafF_(M8194),POU2F2,E2F6_(H-50),TAF1,E2F6,TAF7_(SQ-8),Pol2(phosphoS2),Mxi1_(bHLH),SP1,Pol2,Oct-2,ELF1_(SC-631),EBF1_(C-8)	NA	NA	rs7840270	0.47	0.47	0.431	0.421925	0.4384	0.751	0.5144	0.1846	0.3211	0.44	0.73	0.49	0.19	0.4228	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.598218	1.598218	NA	0.398372	0.219246	NA	0.435	NA	4.0737614
1245	16	1657350	1657350	A	T	intronic	IFT140	NA	NA	NA	ncRNA_intronic	ENSG00000260989	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs743963	0.39	0.39	0.393	0.415136	0.2604	0.4603	0.1931	0.6165	0.4131	0.26	0.44	0.21	0.66	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.134196	NA	NA	NA	NA	ID=COSN165087;OCCURENCE=1(NS),1(haematopoietic_and_lymphoid_tissue),1(urinary_tract),2(lung),1(large_intestine)	0.377	NA	4.0729333
1245	15	45453237	45453237	G	A	intronic	DUOX1	NA	NA	NA	ncRNA_intronic	ENSG00000259539	NA	NA	NA	NA	NA	15q21.1	NA	NA	NA	NA	rs7495495	0.04	0.04	0.03	0.0303514	0.0845	NA	0.0461	0.0045	0.0297	0.08	0.0017	0.06	0.01	0.0761	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.123921	NA	NA	0.100047	0.022066	NA	0.051	NA	4.0726863
1245	3	53003179	53003179	A	C	UTR5	SFMBT1	NM_016329:c.-35T>G	NA	NA	UTR5;UTR3	ENSG00000163935;ENSG00000272305	ENST00000394752:c.-35T>G,ENST00000394750:c.-35T>G,ENST00000296295:c.-35T>G,ENST00000358080:c.-35T>G,ENST00000482396:c.-35T>G,ENST00000483069:c.-35T>G,ENST00000497586:c.-35T>G;ENST00000607495:c.*678T>G	NA	NA	NA	NA	3p21.1	NA	NA	NA	NA	rs11717619	0.1	0.1	0.087	0.096246	0.0775	0.0556	0.1153	0.1505	0.0706	0.08	0.05	0.13	0.18	0.0866	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.488661	NA	NA	0.096977	0.148434	NA	0.203	NA	4.0722564
1245	11	61165280	61165280	G	A	exonic	TMEM216	NA	synonymous SNV	TMEM216:NM_001173990:exon4:c.G264A:p.P88P,TMEM216:NM_001173991:exon4:c.G264A:p.P88P,TMEM216:NM_016499:exon4:c.G81A:p.P27P	exonic	ENSG00000187049	NA	synonymous SNV	ENSG00000187049:ENST00000334888:exon4:c.G264A:p.P88P,ENSG00000187049:ENST00000398979:exon4:c.G81A:p.P27P,ENSG00000187049:ENST00000515837:exon4:c.G264A:p.P88P	NA	NA	11q12.2	NA	NA	NA	NA	rs3741265	0.87	0.87	0.85	0.855831	0.8678	0.9762	0.879	0.7443	0.8538	0.88	0.97	0.88	0.73	0.8659	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.056712	NA	NA	0.860966	0.774038	NA	0.783	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000114238.2;CLNDSDB=.;CLNDSDBID=.	4.0720006
1245	18	77102423	77102423	G	T	intronic	ATP9B	NA	NA	NA	ncRNA_intronic	ENSG00000267015	NA	NA	NA	NA	NA	18q23	NA	NA	NA	NA	rs11659393	0.28	0.28	0.277	0.272165	0.2614	0.4871	0.1945	0.0416	0.4284	0.27	0.52	0.23	0.05	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.609012	NA	NA	NA	NA	NA	0.225	NA	4.0719333
1245	7	154672551	154672551	G	C	intronic	DPP6	NA	NA	NA	intronic	ENSG00000130226	NA	NA	NA	NA	NA	7q36.2	NA	Name=MafK_(ab50322)	NA	NA	rs4960632	0.42	0.42	0.39	0.422324	0.2833	0.5625	0.4856	0.4992	0.272	0.28	0.54	0.45	0.46	0.3581	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.173879	NA	NA	0.286733	0.446523	NA	0.384	NA	4.071867
1245	1	110741086	110741086	C	T	UTR3	SLC6A17	NM_001010898:c.*20C>T	NA	NA	UTR3	ENSG00000197106	ENST00000331565:c.*20C>T	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	rs41306175	0.06	0.06	0.08	0.0497204	0.0865	0.006	0.0634	0.0741	0.0143	0.09	0.01	0.07	0.08	0.0776	0.098	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.347915	1.347915	NA	0.097646	0.078636	NA	0.058	NA	4.0715874
1245	20	43560914	43560914	T	C	intronic	PABPC1L	NA	NA	NA	UTR5	ENSG00000101104	ENST00000372824:c.-807T>C,ENST00000372819:c.-807T>C	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs3746582	0.11	0.11	0.104	0.103834	0.0954	0.1528	0.0836	0.1407	0.0266	0.09	0.15	0.07	0.15	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.847074	NA	NA	NA	NA	NA	0.138	NA	4.0712667
1245	6	84799231	84799231	G	T	UTR3	MRAP2	NM_138409:c.*31G>T	NA	NA	UTR3	ENSG00000135324	ENST00000257776:c.*31G>T	NA	NA	NA	NA	6q14.2	NA	NA	NA	NA	rs9449777	0.18	0.18	0.189	0.206669	0.0726	0.0099	0.1455	0.5772	0.09	0.07	0.01	0.15	0.57	0.1156	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.824251	NA	NA	0.074186	0.512029	NA	0.225	NA	4.0709474
1245	9	68414172	68414172	G	T	intergenic	ANKRD20A3,LOC642236	dist=443879;dist=13611	NA	NA	ncRNA_exonic	ENSG00000232815	NA	NA	NA	NA	NA	9q13	NA	NA	Name=129	NA	rs4928849	NA	NA	NA	0.935104	0.9294	0.9385	0.9121	0.9402	0.9468	NA	NA	NA	NA	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.335553	NA	NA	NA	NA	NA	0.275	NA	4.0706
1245	9	98215631	98215631	T	C	intronic	PTCH1	NA	NA	NA	UTR3	ENSG00000185920	ENST00000375290:c.*1886A>G	NA	NA	NA	NA	9q22.32	NA	NA	NA	NA	rs28583690	0.1	0.1	0.085	0.0842652	0.0964	0.0873	0.0677	0.1165	0.0368	0.11	0.1	0.07	0.1	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.079342	NA	NA	NA	NA	NA	0.072	NA	4.0702667
1245	11	71511869	71511869	C	T	ncRNA_UTR3	FAM86C1	NA	NA	NA	ncRNA_UTR3	ENSG00000158483	NA	NA	NA	NA	NA	11q13.4	NA	NA	NA	NA	rs3750916	0.44	0.44	0.409	0.426118	0.5964	0.3661	0.3674	0.2542	0.5869	0.6	0.36	0.4	0.29	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.026262	NA	NA	NA	NA	NA	0.319	NA	4.0702666
1245	11	71511925	71511925	C	A	ncRNA_UTR3	FAM86C1	NA	NA	NA	ncRNA_UTR3	ENSG00000158483	NA	NA	NA	NA	NA	11q13.4	NA	NA	NA	NA	rs3750915	0.43	0.43	0.397	0.432508	0.5964	0.369	0.3674	0.2753	0.5879	0.58	0.36	0.4	0.32	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.346474	NA	NA	NA	NA	NA	0.029	NA	4.0702666
1245	11	5537780	5537780	C	A	UTR5	UBQLNL	NM_145053:c.-109G>T	NA	NA	UTR5	ENSG00000175518	ENST00000380184:c.-109G>T	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs1809862	0.32	0.32	0.276	0.296326	0.2634	0.3552	0.33	0.2799	0.2679	0.28	0.38	0.3	0.31	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.111409	NA	NA	NA	NA	NA	0.29	NA	4.0699334
1245	5	148925346	148925346	T	A	intronic	CSNK1A1	NA	NA	NA	ncRNA_exonic	ENSG00000241112	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs6883553	0.32	0.32	0.31	0.325479	0.2634	0.2688	0.2723	0.5303	0.2086	0.26	0.27	0.33	0.44	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.751259	1.751259	NA	NA	NA	NA	0.275	NA	4.0699333
1245	1	26583998	26583998	T	C	intronic	CEP85	NA	NA	NA	intronic	ENSG00000130695	NA	NA	NA	NA	NA	1p36.11	NA	Name=GATA-1	NA	NA	rs4659417	0.76	0.76	0.766	0.726438	0.9304	0.4583	0.696	0.8812	0.6053	0.93	0.47	0.73	0.85	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.437329	NA	NA	NA	NA	NA	0.783	NA	4.0696
1245	8	38876466	38876466	T	C	intronic	ADAM9	NA	NA	NA	intronic	ENSG00000168615	NA	NA	NA	Score=295;Name=lod=21	NA	8p11.22	NA	NA	NA	NA	rs6474518	0.48	0.48	NA	0.455671	0.4672	0.7282	0.5259	0.2859	0.3425	0.44	0.66	0.49	0.3	0.456	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.472839	1.472839	NA	0.007558	0.004085	NA	NA	NA	4.069242
1245	22	27021457	27021457	T	C	exonic	CRYBA4	NA	synonymous SNV	CRYBA4:NM_001886:exon4:c.T171C:p.F57F	exonic	ENSG00000196431	NA	synonymous SNV	ENSG00000196431:ENST00000354760:exon4:c.T171C:p.F57F	Score=578;Name=lod=299	NA	22q12.1	NA	NA	NA	NA	rs5761637	0.92	0.92	0.925	0.923722	0.8579	0.994	0.889	0.9334	0.9305	0.85	1	0.9	0.94	0.8927	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.074302	NA	NA	0.847093	0.924648	NA	0.862	NA	4.0689736
1245	11	120176310	120176310	G	A	intronic	POU2F3	NA	NA	NA	intronic	ENSG00000137709	NA	NA	NA	NA	NA	11q23.3	NA	NA	Name=14	NA	rs12790634	0.2	0.2	0.195	0.176118	0.331	0.0298	0.2695	0.1218	0.1748	0.33	0.03	0.26	0.16	0.2723	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.834741	NA	NA	0.327751	0.162052	NA	0.333	NA	4.068949
1245	17	5271804	5271804	A	G	intronic	RABEP1	NA	NA	NA	ncRNA_intronic	ENSG00000263220	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs7213832	0.09	0.09	0.107	0.0990415	0.0915	0.001	0.0519	0.2458	0.0429	0.1	NA	0.06	0.21	0.0857	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.591707	1.591707	NA	0.087839	0.221374	NA	0.167	NA	4.0682943
1245	11	69588020	69588020	C	T	UTR3	FGF4	NM_002007:c.*57G>A	NA	NA	UTR3	ENSG00000075388	ENST00000168712:c.*57G>A	NA	NA	NA	NA	11q13.3	NA	NA	NA	NA	rs3740639	0.21	0.21	0.203	0.176318	0.2654	0.1627	0.1931	0.0893	0.2045	0.26	0.2	0.25	0.11	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.544512	NA	NA	NA	NA	NA	0.333	NA	4.0679334
1245	17	25419373	25419373	T	A	intergenic	NONE,MIR4522	dist=NONE;dist=201563	NA	NA	intergenic	ENSG00000265646,ENSG00000265246	dist=8311;dist=145512	NA	NA	NA	NA	17q11.1	NA	Name=Pol2-4H8,HEY1	NA	NA	rs61354713	0.39	0.39	0.366	0.414936	0.2654	0.502	0.4323	0.5061	0.3436	0.25	0.49	0.39	0.48	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.451244	NA	NA	NA	NA	NA	0.13	NA	4.0679334
1245	9	215511	215511	C	T	UTR5	C9orf66	NM_152569:c.-115G>A	NA	NA	UTR5	ENSG00000183784	ENST00000382387:c.-115G>A	NA	NA	NA	NA	9p24.3	NA	NA	NA	NA	rs2023402	0.39	0.39	0.37	0.440895	0.2664	0.3343	0.4885	0.6082	0.4703	0.27	0.31	0.47	0.59	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.131644	NA	NA	NA	NA	NA	0.42	NA	4.0669334
1245	8	82720760	82720760	G	A	intronic	SNX16	NA	NA	NA	ncRNA_exonic	ENSG00000231942	NA	NA	NA	NA	NA	8q21.13	NA	NA	NA	NA	rs2600605	0.27	0.27	0.249	0.28155	0.2664	0.377	0.3184	0.1029	0.4141	0.28	0.37	0.31	0.13	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.065743	NA	NA	NA	NA	NA	0.217	NA	4.0669333
1245	4	69696638	69696638	A	G	UTR3	UGT2B10	NM_001144767:c.*41A>G,NM_001075:c.*41A>G	NA	NA	UTR3	ENSG00000109181	ENST00000265403:c.*41A>G,ENST00000458688:c.*41A>G	NA	NA	NA	NA	4q13.2	NA	NA	NA	NA	rs17146905	0.09	0.09	0.07	0.0896565	0.0924	0.1756	0.0778	0.0499	0.0603	0.09	0.16	0.08	0.03	0.0857	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.090907	NA	NA	0.088345	0.046875	NA	0.138	NA	4.0668884
1245	16	74706349	74706349	T	C	UTR3	MLKL	NM_001142497:c.*53A>G,NM_152649:c.*53A>G	NA	NA	UTR3	ENSG00000168404	ENST00000306247:c.*53A>G,ENST00000308807:c.*53A>G,ENST00000576529:c.*53A>G	NA	NA	NA	NA	16q23.1	NA	NA	NA	NA	rs9783779	0.12	0.12	0.091	0.127596	0.1451	0.0466	0.2925	0.0968	0.1176	0.15	0.05	0.25	0.07	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.725413	NA	NA	0.121622	0.09104	NA	0.138	NA	4.0666114
1245	11	47213117	47213117	G	A	intergenic	PACSIN3,DDB2	dist=5107;dist=23376	NA	NA	upstream	ENSG00000243802	NA	NA	NA	Score=528;Name=lod=187	NA	11p11.2	NA	NA	NA	NA	rs11039122	0.29	0.29	0.249	0.267572	0.4334	0.2063	0.4438	0.053	0.3252	0.42	0.21	0.43	0.06	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.36515	1.36515	NA	NA	NA	NA	0.435	NA	4.0666
1245	11	64977424	64977424	C	T	intronic	CAPN1	NA	NA	NA	intronic	ENSG00000014216	NA	NA	NA	NA	NA	11q13.1	NA	NA	Name=2	NA	rs2271448	0.29	0.29	0.257	0.27476	0.325	0.2421	0.4308	0.1513	0.3129	0.33	0.24	0.37	0.21	0.3091	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.001642	NA	NA	0.299641	0.182532	NA	0.29	NA	4.066259
1245	19	53343779	53343779	A	G	UTR3	ZNF468	NM_001008801:c.*199T>C,NM_001277120:c.*1502T>C	NA	NA	UTR3	ENSG00000204604	ENST00000595646:c.*199T>C,ENST00000390651:c.*199T>C,ENST00000396409:c.*199T>C,ENST00000243639:c.*1502T>C	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs9749285	0.3	0.3	0.315	0.364217	0.2674	0.1101	0.2781	0.5764	0.5	0.27	0.11	0.29	0.57	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.244073	NA	NA	NA	NA	NA	0.362	NA	4.0659334
1245	19	42265866	42265866	C	G	intronic	CEACAM6	NA	NA	NA	ncRNA_intronic	ENSG00000268833	NA	NA	NA	Score=289;Name=lod=20	NA	19q13.2	NA	NA	NA	NA	rs28547939	0.54	0.54	0.547	0.54393	0.4026	0.5635	0.5346	0.7315	0.4223	0.41	0.58	0.5	0.73	0.456	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.215166	NA	NA	0.408953	0.668634	NA	0.442	NA	4.0657803
1245	17	40716520	40716520	A	G	exonic	COASY	NA	synonymous SNV	COASY:NM_025233:exon3:c.A972G:p.T324T,COASY:NM_001042529:exon4:c.A972G:p.T324T,COASY:NM_001042532:exon5:c.A1059G:p.T353T	exonic	ENSG00000068120	NA	synonymous SNV	ENSG00000068120:ENST00000393818:exon3:c.A972G:p.T324T,ENSG00000068120:ENST00000420359:exon4:c.A972G:p.T324T,ENSG00000068120:ENST00000421097:exon4:c.A972G:p.T324T,ENSG00000068120:ENST00000449624:exon4:c.A87G:p.T29T,ENSG00000068120:ENST00000591779:exon4:c.A87G:p.T29T,ENSG00000068120:ENST00000590958:exon5:c.A1059G:p.T353T	NA	NA	17q21.2	NA	NA	NA	NA	rs598126	0.47	0.47	0.44	0.504593	0.5229	0.4534	0.487	0.4198	0.6656	0.53	0.45	0.44	0.45	0.5361	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.042331	NA	NA	0.542209	0.422379	NA	0.601	NA	4.0654576
1245	19	20808149	20808149	A	G	exonic	ZNF626	NA	synonymous SNV	ZNF626:NM_001076675:exon4:c.T534C:p.C178C	exonic	ENSG00000188171	NA	synonymous SNV	ENSG00000188171:ENST00000595405:exon2:c.T306C:p.C102C,ENSG00000188171:ENST00000601440:exon4:c.T534C:p.C178C	Score=304;Name=lod=23	NA	19p12	NA	NA	NA	NA	rs1991528	0.8	0.8	0.792	0.779153	0.8936	0.8343	0.8804	0.5802	0.8016	0.88	0.83	0.9	0.58	0.8348	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.191888	NA	NA	0.873175	0.646406	NA	0.826	NA	4.0650916
1246	11	21581665	21581665	C	T	intronic	NELL1	NA	NA	NA	intronic	ENSG00000165973	NA	NA	NA	NA	NA	11p15.1	NA	Name=FOXA1_(C-20)	NA	NA	rs7119475	0.83	0.83	0.816	0.783946	0.9354	0.8056	0.8775	0.5976	0.7914	0.94	0.85	0.9	0.6	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.136115	NA	NA	NA	NA	NA	0.841	NA	4.0646
1246	15	31110071	31110071	A	G	upstream	HERC2P10	NA	NA	NA	ncRNA_intronic	ENSG00000259845	NA	NA	NA	NA	NA	15q13.2	NA	NA	NA	NA	rs3815112	0.1	0.1	0.088	0.1252	0.1024	0.0317	0.0821	0.2632	0.089	0.09	0.03	0.1	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.738079	NA	NA	NA	NA	NA	0.036	NA	4.0642666
1246	6	56359034	56359034	C	A	ncRNA_intronic	RNU6-71P	NA	NA	NA	intronic	ENSG00000151914	NA	NA	NA	NA	NA	6p12.1	NA	NA	NA	NA	rs11759493	0.21	0.21	0.196	0.222045	0.2694	0.2401	0.2594	0.0688	0.3354	0.26	0.23	0.29	0.06	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.704239	2.704239	NA	NA	NA	NA	0.203	NA	4.0639333
1246	3	124739892	124739892	G	A	exonic	HEG1	NA	synonymous SNV	HEG1:NM_020733:exon4:c.C996T:p.A332A	exonic	ENSG00000173706	NA	synonymous SNV	ENSG00000173706:ENST00000311127:exon4:c.C996T:p.A332A	NA	NA	3q21.2	NA	NA	NA	NA	rs6438874	0.5	0.5	0.476	0.509585	0.5437	0.4772	0.4769	0.4561	0.6033	0.56	0.5	0.48	0.43	0.5532	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.271021	NA	NA	0.506067	0.432166	NA	0.406	NA	4.0636996
1246	3	150403749	150403749	T	C	intronic	FAM194A	NA	NA	NA	intronic	ENSG00000163645	NA	NA	NA	Score=403;Name=lod=58	NA	3q25.1	NA	NA	NA	NA	rs4680107	0.36	0.36	0.354	0.346645	0.2913	0.4683	0.3991	0.357	0.227	0.3	0.46	0.33	0.38	0.3276	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.259904	2.259904	NA	0.317558	0.367907	NA	0.319	NA	4.063542
1246	3	49450449	49450449	C	T	intronic	TCTA	NA	NA	NA	intronic	ENSG00000145022	NA	NA	NA	NA	NA	3p21.31	NA	NA	Name=17	NA	rs6779524	0.25	0.25	0.235	0.217851	0.336	0.0724	0.1744	0.2738	0.2014	0.34	0.09	0.23	0.32	0.2863	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.138649	4.138649	NA	0.314302	0.294144	NA	0.283	NA	4.063398
1246	13	101287365	101287365	T	C	exonic	TMTC4	NA	synonymous SNV	TMTC4:NM_001079669:exon10:c.A1230G:p.A410A,TMTC4:NM_032813:exon11:c.A1287G:p.A429A	exonic	ENSG00000125247	NA	synonymous SNV	ENSG00000125247:ENST00000328767:exon8:c.A897G:p.A299A,ENSG00000125247:ENST00000376234:exon10:c.A1230G:p.A410A,ENSG00000125247:ENST00000342624:exon11:c.A1287G:p.A429A	NA	NA	13q32.3	Score=824;Name=V$GRE_C	NA	NA	NA	rs946838	0.86	0.86	0.84	0.83766	0.8708	0.9901	0.889	0.6437	0.8722	0.86	0.99	0.88	0.7	0.8647	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.073092	NA	NA	0.868023	0.686564	NA	0.775	NA	4.0631436
1246	4	189063392	189063392	G	A	intronic	TRIML1	NA	NA	NA	ncRNA_intronic	ENSG00000247130	NA	NA	NA	NA	NA	4q35.2	NA	NA	NA	NA	rs78828180	0.15	0.15	0.068	0.133786	0.0865	0.2262	0.0922	0.1354	0.1145	0.09	0.24	0.11	0.16	0.1178	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.633184	1.633184	NA	0.06593	0.110581	NA	NA	NA	4.0631033
1246	19	10370490	10370490	T	A	UTR3	MRPL4	NM_146387:c.*1T>A,NM_146388:c.*1076T>A,NM_015956:c.*1T>A	NA	NA	ncRNA_UTR3	ENSG00000105364	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs1059840	0.13	0.13	0.134	0.133187	0.1491	0.0734	0.1354	0.1505	0.1534	0.15	0.08	0.16	0.16	0.1401	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.289432	NA	NA	0.147791	0.170222	NA	0.13	NA	4.063009
1246	10	97779281	97779281	G	A	ncRNA_intronic	ENTPD1-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000226688	NA	NA	NA	NA	NA	10q24.1	NA	NA	NA	NA	rs4918984	0.69	0.69	0.71	0.704473	0.6044	0.8522	0.6988	0.6762	0.6973	0.6	0.83	0.65	0.71	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.15603	NA	NA	NA	NA	NA	0.667	NA	4.0622666
1246	3	37017798	37017798	C	G	intergenic	TRANK1,EPM2AIP1	dist=31250;dist=9559	NA	NA	upstream	ENSG00000236165	NA	NA	NA	Score=647;Name=lod=567	NA	3p22.2	NA	NA	NA	NA	rs56198917	0.27	0.27	NA	0.215855	0.4384	0.0744	0.353	0.0817	0.2168	0.45	0.09	0.41	0.11	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.09009	NA	NA	NA	NA	NA	0.326	NA	4.0616
1246	19	49838891	49838891	C	A	intronic	CD37	NA	NA	NA	ncRNA_intronic	ENSG00000197813	NA	NA	NA	NA	NA	19q13.33	NA	Name=NFKB,ZBTB7A_(SC-34508),Egr-1,TAF1,Pol2,YY1_(C-20)	Name=14	NA	rs354020	0.75	0.75	0.72	0.761981	0.7425	0.8085	0.83	0.6732	0.8057	0.76	0.79	0.8	0.63	0.7759	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.200075	NA	NA	0.753837	0.663414	NA	0.638	NA	4.0610963
1246	11	118255278	118255278	G	A	ncRNA_intronic	LOC100131626	NA	NA	NA	intronic	ENSG00000110344	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs6589663	0.36	0.36	0.347	0.390575	0.2724	0.5813	0.2032	0.3177	0.547	0.28	0.6	0.24	0.27	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.818115	NA	NA	NA	NA	NA	0.297	NA	4.0609333
1246	1	152975829	152975829	A	G	exonic	SPRR3	NA	synonymous SNV	SPRR3:NM_001097589:exon2:c.A333G:p.E111E,SPRR3:NM_005416:exon3:c.A333G:p.E111E	exonic	ENSG00000163209	NA	synonymous SNV	ENSG00000163209:ENST00000295367:exon2:c.A333G:p.E111E,ENSG00000163209:ENST00000542696:exon2:c.A309G:p.E103E,ENSG00000163209:ENST00000331860:exon3:c.A333G:p.E111E,ENSG00000163209:ENST00000443178:exon3:c.A333G:p.E111E	NA	NA	1q21.3	NA	NA	NA	NA	rs1970328	0.55	0.55	0.559	0.52496	0.5328	0.6319	0.4337	0.5	0.5051	0.53	0.66	0.48	0.52	0.5296	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.243868	NA	NA	0.543372	0.524966	NA	0.384	NA	4.0608946
1246	15	69383785	69383785	C	T	ncRNA_intronic	LINC00277,MIR548H4	NA	NA	NA	ncRNA_intronic	ENSG00000212766,ENSG00000259222	NA	NA	NA	NA	NA	15q23	NA	NA	NA	NA	rs4777110	0.56	0.56	0.542	0.52476	0.6064	0.4692	0.5605	0.5507	0.4376	0.6	0.47	0.6	0.56	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.298839	NA	NA	NA	NA	NA	0.536	NA	4.0602666
1246	2	47067540	47067540	G	C	ncRNA_intronic	LOC100134259	NA	NA	NA	intronic	ENSG00000239332	NA	NA	NA	NA	NA	2p21	NA	NA	NA	NA	rs35772556	0.17	0.17	0.161	0.173922	0.2734	0.126	0.1513	0.0477	0.3078	0.28	0.13	0.18	0.05	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.053556	NA	NA	NA	NA	NA	0.275	NA	4.0599333
1246	4	159199382	159199382	G	A	intergenic	TMEM144,RXFP1	dist=22943;dist=243484	NA	NA	ncRNA_exonic	ENSG00000251429	NA	NA	NA	Score=742;Name=lod=1387	NA	4q32.1	NA	NA	NA	NA	rs2009748	0.82	0.82	0.8	0.759185	0.9404	0.8829	0.745	0.5053	0.7986	0.95	0.9	0.82	0.53	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.342595	NA	NA	NA	NA	NA	0.775	NA	4.0596
1246	22	42523805	42523805	C	T	intronic	CYP2D6	NA	NA	NA	ncRNA_intronic	ENSG00000237037	NA	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs28371725	0.06	0.06	0.048	0.0634984	0.0934	0.0377	0.062	0.0182	0.1217	0.09	0.03	0.08	0.02	0.0808	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.427942	NA	0.4	0.099977	0.033728	NA	0.08	NA	4.0591563
1246	19	56499337	56499337	C	T	UTR3	NLRP8	NM_176811:c.*58C>T	NA	NA	UTR3	ENSG00000179709	ENST00000291971:c.*58C>T	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs306456	0.25	0.25	0.243	0.236821	0.2744	0.2351	0.2133	0.2141	0.2474	0.29	0.24	0.22	0.22	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.624094	NA	NA	NA	NA	NA	0.196	NA	4.0589334
1246	8	145730330	145730330	G	A	intronic	GPT	NA	NA	NA	ncRNA_intronic	ENSG00000255182	NA	NA	NA	NA	NA	8q24.3	NA	NA	Name=2	NA	rs2101039	0.39	0.39	0.339	0.399561	0.4245	0.5337	0.4553	0.1536	0.5286	0.42	0.48	0.49	0.15	0.4286	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.614357	NA	NA	0.421512	0.205949	NA	0.275	NA	4.0587213
1246	7	100482026	100482026	T	C	exonic	SRRT	NA	synonymous SNV	SRRT:NM_001128852:exon7:c.T795C:p.L265L,SRRT:NM_001128853:exon7:c.T795C:p.L265L,SRRT:NM_001128854:exon7:c.T795C:p.L265L,SRRT:NM_015908:exon7:c.T795C:p.L265L	exonic	ENSG00000087087	NA	synonymous SNV	ENSG00000087087:ENST00000347433:exon7:c.T795C:p.L265L,ENSG00000087087:ENST00000388793:exon7:c.T795C:p.L265L,ENSG00000087087:ENST00000432932:exon7:c.T795C:p.L265L,ENSG00000087087:ENST00000457580:exon7:c.T795C:p.L265L	NA	NA	7q22.1	NA	NA	NA	NA	rs15624	0.59	0.59	0.591	0.576877	0.5159	0.8095	0.6513	0.4107	0.5716	0.52	0.81	0.62	0.43	0.569	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.312057	NA	NA	0.523605	0.442351	NA	0.413	NA	4.0581616
1246	7	100458795	100458795	T	C	exonic	SLC12A9	NA	synonymous SNV	SLC12A9:NM_001267814:exon8:c.T987C:p.A329A,SLC12A9:NM_001267812:exon10:c.T1254C:p.A418A,SLC12A9:NM_020246:exon10:c.T1254C:p.A418A	exonic	ENSG00000146828	NA	synonymous SNV	ENSG00000146828:ENST00000416675:exon7:c.T678C:p.A226A,ENSG00000146828:ENST00000418037:exon7:c.T462C:p.A154A,ENSG00000146828:ENST00000275729:exon8:c.T987C:p.A329A,ENSG00000146828:ENST00000415287:exon8:c.T987C:p.A329A,ENSG00000146828:ENST00000354161:exon10:c.T1254C:p.A418A,ENSG00000146828:ENST00000428758:exon10:c.T1254C:p.A418A,ENSG00000146828:ENST00000540482:exon10:c.T1254C:p.A418A	NA	NA	7q22.1	NA	NA	NA	NA	rs314378	0.59	0.59	0.586	0.578474	0.5159	0.8095	0.6527	0.4168	0.5706	0.52	0.81	0.62	0.44	0.5689	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.973758	NA	NA	0.523721	0.446891	NA	0.457	NA	4.0581456
1246	14	106173790	106173790	A	G	intergenic	ELK2AP,KIAA0125	dist=34646;dist=210048	NA	NA	exonic	ENSG00000211895	NA	synonymous SNV	ENSG00000211895:ENST00000390547:exon3:c.T777C:p.D259D	NA	NA	14q32.33	NA	NA	NA	NA	rs8709	NA	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.442	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.080254	NA	NA	NA	NA	NA	0.167	NA	4.058
1246	5	169715038	169715038	A	G	intronic	LCP2	NA	NA	NA	intronic	ENSG00000043462	NA	NA	NA	NA	NA	5q35.1	NA	NA	Name=2	NA	rs315721	0.34	0.34	0.346	0.355232	0.3022	0.377	0.3285	0.3933	0.3548	0.29	0.35	0.31	0.42	0.3362	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.032643	NA	NA	0.303813	0.360042	NA	0.377	NA	4.057787
1246	22	42392811	42392811	G	A	UTR3	SEPT3	NM_019106:c.*2051G>A	NA	NA	UTR3	ENSG00000100167	ENST00000396425:c.*2051G>A	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs1062753	0.25	0.25	0.24	0.259984	0.2763	0.0585	0.3876	0.3472	0.2423	0.27	0.05	0.42	0.32	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.611611	NA	NA	NA	NA	NA	0.42	NA	4.0570334
1246	19	52403516	52403516	T	C	UTR5	ZNF649	NM_023074:c.-156A>G	NA	NA	ncRNA_exonic	ENSG00000268095	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs1549931	0.68	0.68	0.707	0.705671	0.4433	0.7411	0.6513	0.9486	0.6493	0.46	0.77	0.62	0.94	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.441436	NA	NA	NA	NA	NA	0.659	NA	4.0567
1246	12	7049999	7049999	C	T	intronic	ATN1	NA	NA	NA	intronic	ENSG00000111676	NA	NA	NA	NA	NA	12p13.31	Score=814;Name=V$RREB1_01	NA	NA	NA	rs2071076	0.43	0.43	0.443	0.461861	0.2962	0.2768	0.389	0.8608	0.3354	0.29	0.25	0.43	0.85	0.345	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.586271	2.586271	NA	0.302791	0.766228	NA	0.464	NA	4.056009
1246	15	91428589	91428589	T	G	intronic	FES	NA	NA	NA	exonic	ENSG00000182511	NA	nonsynonymous SNV	ENSG00000182511:ENST00000470152:exon2:c.T314G:p.M105R	NA	NA	15q26.1	NA	NA	NA	NA	rs7183988	0.6	0.6	0.555	0.592053	0.5258	0.8085	0.6398	0.441	0.6074	0.52	0.83	0.64	0.43	0.5858	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.771879	NA	NA	NA	NA	NA	0.486	NA	4.0550667
1247	3	151463493	151463493	A	G	ncRNA_intronic	MIR548H2	NA	NA	NA	intronic	ENSG00000197953	NA	NA	NA	NA	NA	3q25.1	NA	NA	NA	NA	rs1550964	0.14	0.14	0.119	0.155152	0.0795	0.1786	0.1484	0.1384	0.2362	0.09	0.18	0.14	0.15	0.1222	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.717704	NA	NA	0.077013	0.138409	NA	0.109	NA	4.0546203
1247	12	8388349	8388349	A	G	ncRNA_intronic	FAM86FP	NA	NA	NA	ncRNA_exonic	ENSG00000215241	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs7973130	0.45	0.45	0.45	0.379193	0.6123	0.4137	0.3963	0.1505	0.4008	0.62	0.47	0.45	0.16	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.686012	NA	NA	NA	NA	ID=COSN164134;OCCURENCE=1(NS)	0.029	NA	4.0543666
1247	10	88768657	88768657	C	T	exonic	AGAP11	NA	synonymous SNV	AGAP11:NM_133447:exon12:c.C648T:p.D216D	ncRNA_exonic	ENSG00000151303,ENSG00000261011,ENSG00000271880	NA	NA	NA	Score=371;Name=lod=43	NA	10q23.2	NA	NA	NA	NA	rs1745901	0.79	0.79	0.794	0.777756	0.7038	0.9286	0.7522	0.8116	0.6708	0.7	0.93	0.72	0.83	0.7274	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.217694	NA	NA	0.681163	0.78325	NA	0.71	NA	4.0543036
1247	6	46856100	46856100	G	A	exonic	GPR116	NA	synonymous SNV	GPR116:NM_001098518:exon4:c.C300T:p.T100T,GPR116:NM_015234:exon4:c.C300T:p.T100T	exonic	ENSG00000069122	NA	synonymous SNV	ENSG00000069122:ENST00000265417:exon4:c.C300T:p.T100T,ENSG00000069122:ENST00000283296:exon4:c.C300T:p.T100T,ENSG00000069122:ENST00000362015:exon4:c.C300T:p.T100T,ENSG00000069122:ENST00000456426:exon4:c.C300T:p.T100T	NA	NA	6p12.3	NA	Name=c-Fos,GATA-2	NA	NA	rs678312	0.89	0.89	0.887	0.861022	0.8618	0.8413	0.8602	0.9387	0.7761	0.86	0.87	0.84	0.97	0.8752	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.882707	NA	NA	0.875581	0.929641	NA	0.935	NA	4.0540856
1247	5	169805629	169805629	T	G	UTR3	KCNMB1	NM_004137:c.*79A>C	NA	NA	UTR3	ENSG00000145936	ENST00000274629:c.*79A>C	NA	NA	NA	NA	5q35.1	NA	NA	NA	NA	rs2656841	0.34	0.34	0.023	0.405351	0.2793	0.374	0.3314	0.5197	0.4652	0.24	0.37	0.31	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.881746	NA	NA	NA	NA	NA	NA	NA	4.0540334
1247	5	169805630	169805630	G	T	UTR3	KCNMB1	NM_004137:c.*78C>A	NA	NA	UTR3	ENSG00000145936	ENST00000274629:c.*78C>A	NA	NA	NA	NA	5q35.1	NA	NA	NA	NA	rs2656842	0.35	0.35	0.017	0.405351	0.2793	0.374	0.3314	0.5197	0.4652	0.25	0.37	0.31	0.49	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.206634	NA	NA	NA	NA	NA	NA	NA	4.0540334
1247	15	86287724	86287724	G	A	intronic	AKAP13	NA	NA	NA	ncRNA_exonic	ENSG00000259407	NA	NA	NA	NA	NA	15q25.3	NA	NA	NA	NA	rs11629690	0.16	0.16	0.129	0.137181	0.2793	0.0496	0.2277	0.0098	0.1892	0.28	0.06	0.24	0.01	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.547277	NA	NA	NA	NA	NA	0.217	NA	4.0540333
1247	11	1213174	1213174	A	G	intergenic	MUC2,MUC5B	dist=108757;dist=31121	NA	NA	intergenic	ENSG00000215182,ENSG00000117983	dist=50813;dist=31122	NA	NA	NA	NA	11p15.5	NA	NA	Name=35	NA	rs74046245	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2794	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.059061	NA	NA	NA	NA	NA	0.022	NA	4.0539334
1247	9	90396135	90396135	G	A	ncRNA_exonic	CTSL3P	NA	NA	NA	ncRNA_exonic	ENSG00000188029	NA	NA	NA	NA	NA	9q21.33	NA	NA	NA	NA	rs9410963	0.21	0.21	0.193	0.212061	0.1938	0.249	0.255	0.1626	0.229	0.18	0.26	0.27	0.16	0.2079	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.511809	NA	NA	0.211163	0.167272	NA	0.239	NA	4.0538036
1247	7	50742180	50742180	C	T	exonic	GRB10	NA	synonymous SNV	GRB10:NM_001001549:exon3:c.G315A:p.P105P,GRB10:NM_001001550:exon3:c.G141A:p.P47P,GRB10:NM_005311:exon3:c.G315A:p.P105P,GRB10:NM_001001555:exon4:c.G141A:p.P47P	exonic	ENSG00000106070	NA	synonymous SNV	ENSG00000106070:ENST00000357271:exon3:c.G315A:p.P105P,ENSG00000106070:ENST00000398810:exon3:c.G141A:p.P47P,ENSG00000106070:ENST00000398812:exon3:c.G315A:p.P105P,ENSG00000106070:ENST00000402497:exon3:c.G141A:p.P47P,ENSG00000106070:ENST00000402578:exon3:c.G141A:p.P47P,ENSG00000106070:ENST00000407526:exon3:c.G141A:p.P47P,ENSG00000106070:ENST00000439599:exon3:c.G297A:p.P99P,ENSG00000106070:ENST00000335866:exon4:c.G141A:p.P47P,ENSG00000106070:ENST00000406641:exon4:c.G141A:p.P47P,ENSG00000106070:ENST00000403097:exon5:c.G297A:p.P99P,ENSG00000106070:ENST00000439044:exon5:c.G297A:p.P99P,ENSG00000106070:ENST00000401949:exon6:c.G315A:p.P105P	NA	NA	7p12.1	NA	NA	NA	NA	rs1800504	0.51	0.51	0.51	0.532548	0.5328	0.4028	0.5288	0.6626	0.4928	0.52	0.35	0.55	0.65	0.5213	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.896893	NA	NA	0.558942	0.6704	NA	0.572	NA	4.0536246
1247	11	119291480	119291480	G	A	ncRNA_intronic	LOC100499227	NA	NA	NA	ncRNA_intronic	ENSG00000245248	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs3138091	0.62	0.62	0.612	0.631589	0.6133	0.879	0.5692	0.3654	0.7996	0.63	0.88	0.55	0.37	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.227044	NA	NA	NA	NA	NA	0.543	NA	4.0533666
1247	19	45016116	45016116	A	G	exonic	CEACAM20	NA	nonsynonymous SNV	CEACAM20:NM_001102598:exon9:c.T1255C:p.C419R,CEACAM20:NM_001102599:exon9:c.T1255C:p.C419R,CEACAM20:NM_001102597:exon10:c.T1534C:p.C512R,CEACAM20:NM_001102600:exon10:c.T1534C:p.C512R	ncRNA_exonic	ENSG00000176395	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs8100718	0.37	0.37	0.334	0.384385	0.4612	0.3919	0.4078	0.1679	0.5736	0.45	0.37	0.47	0.16	0.4841	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.107301	NA	0.01	0.501439	0.229479	ID=COSM1129797;OCCURENCE=1(prostate)	0.312	NA	4.053261
1247	13	114542957	114542957	C	G	ncRNA_intronic	GAS6-AS1	NA	NA	NA	intronic	ENSG00000183087	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs9604489	0.28	0.28	0.276	0.291334	0.2803	0.2431	0.2695	0.2564	0.4151	0.28	0.25	0.27	0.3	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.216644	NA	NA	NA	NA	NA	0.275	NA	4.0530333
1247	9	5765648	5765648	G	A	intronic	KIAA1432	NA	NA	NA	UTR3	ENSG00000099219	ENST00000462592:c.*224C>T	NA	NA	NA	NA	9p24.1	NA	NA	NA	NA	rs41280733	0.02	0.02	0.011	0.0133786	0.0378	NA	0.0288	NA	0.0092	0.04	NA	0.04	NA	0.0305	0.045	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.498921	NA	NA	0.045465	0.010667	NA	0.007	NA	4.0529017
1247	14	70809496	70809496	A	G	intronic	COX16,SYNJ2BP-COX16	NA	NA	NA	ncRNA_intronic	ENSG00000258644	NA	NA	NA	NA	NA	14q24.2	NA	NA	NA	NA	rs72733767	0.04	0.04	0.039	0.0321486	0.1064	0.005	0.0331	0.0045	0.0204	0.1	0.0017	0.04	0.01	0.0738	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.577915	NA	NA	0.100233	0.021571	NA	0.08	NA	4.0529003
1247	19	5784314	5784314	G	A	intronic	PRR22	NA	NA	NA	UTR3	ENSG00000212123,ENSG00000267157	ENST00000390672:c.*49C>T;ENST00000586012:c.*49C>T	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs10410693	0.14	0.14	0.123	0.153554	0.1143	0.2163	0.0677	0.1732	0.1636	0.11	0.16	0.12	0.17	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.907856	NA	NA	NA	NA	NA	0.181	NA	4.0523667
1247	2	234775941	234775941	A	G	ncRNA_exonic	MSL3P1	NA	NA	NA	ncRNA_exonic	ENSG00000224287	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs213545	0.62	0.62	0.619	0.556709	0.6143	0.7232	0.6153	0.4244	0.4632	0.63	0.77	0.61	0.42	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.029354	NA	NA	NA	NA	NA	0.703	NA	4.0523666
1247	3	156528401	156528401	G	A	ncRNA_exonic	PA2G4P4	NA	NA	NA	ncRNA_exonic	ENSG00000230457	NA	NA	NA	NA	NA	3q25.31	NA	NA	NA	NA	rs9812169	0.62	0.62	0.569	0.608626	0.6153	0.8433	0.6657	0.3245	0.7035	0.61	0.84	0.7	0.36	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.050619	NA	NA	NA	NA	NA	0.565	NA	4.0513666
1247	11	89224326	89224326	G	A	intronic	NOX4	NA	NA	NA	intronic	ENSG00000086991	NA	NA	NA	NA	NA	11q14.3	NA	Name=YY1_(C-20)	Name=92	NA	rs10830279	0.45	0.45	0.42	0.414537	0.6839	0.3313	0.5331	0.1384	0.5123	0.68	0.35	0.52	0.17	0.5791	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.314146	1.314146	NA	0.685741	0.246479	NA	0.493	NA	4.051259
1247	1	168282261	168282261	T	A	UTR3	TBX19	NM_005149:c.*21T>A	NA	NA	UTR3	ENSG00000143178	ENST00000367821:c.*21T>A,ENST00000431969:c.*21T>A,ENST00000441464:c.*21T>A	NA	NA	NA	NA	1q24.2	NA	NA	Name=17	NA	rs3885717	0.44	0.44	0.457	0.489417	0.4185	0.4504	0.4452	0.5726	0.5215	0.4	0.46	0.44	0.49	0.4453	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.058	NA	NA	0.418334	0.53064	NA	0.457	NA	4.0511994
1247	15	81638646	81638646	G	A	intronic	TMC3	NA	NA	NA	ncRNA_intronic	ENSG00000259343	NA	NA	NA	NA	NA	15q25.1	NA	NA	NA	NA	rs35379895	0.21	0.21	0.202	0.274161	0.1491	0.2986	0.2939	0.1921	0.4744	0.15	0.31	0.22	0.18	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.102867	NA	NA	0.133878	0.175578	ID=COSN165013;OCCURENCE=1(breast)	0.283	NA	4.0503553
1247	5	96112005	96112005	C	T	UTR3	ERAP1	NM_001198541:c.*95G>A,NM_001040458:c.*95G>A	NA	NA	UTR3	ENSG00000164307	ENST00000443439:c.*95G>A	NA	NA	NA	NA	5q15	NA	NA	NA	NA	rs10515248	0.06	0.06	0.042	0.0595048	0.1372	NA	0.1138	0.0053	0.0757	0.13	NA	0.12	0.01	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.588465	2.588465	NA	0.14582	0.018786	NA	0.159	NA	4.0503134
1247	13	114542942	114542942	C	T	ncRNA_intronic	GAS6-AS1	NA	NA	NA	intronic	ENSG00000183087	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs9604490	0.26	0.26	0.247	0.290535	0.2833	0.244	0.2637	0.2549	0.4131	0.28	0.25	0.27	0.24	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.096799	NA	NA	NA	NA	NA	0.275	NA	4.0500333
1247	9	139926402	139926402	T	C	intronic	C9orf139,FUT7	NA	NA	NA	intronic	ENSG00000180539,ENSG00000180549	NA	NA	NA	NA	NA	9q34.3	NA	Name=GABP	Name=7	NA	rs7469569	0.63	0.63	0.718	0.699481	0.6292	0.7679	0.6037	0.7148	0.7485	0.6	0.72	0.59	0.63	0.6717	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.08748	NA	NA	0.649511	0.700227	NA	0.239	NA	4.049589
1247	7	111372244	111372244	G	T	intronic	DOCK4	NA	NA	NA	intronic	ENSG00000128512	NA	NA	NA	NA	NA	7q31.1	NA	Name=GATA-2	NA	NA	rs12705796	0.22	0.22	0.219	0.217851	0.3191	0.0208	0.2205	0.261	0.2566	0.32	0.02	0.27	0.27	0.2898	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.758325	2.758325	NA	0.341726	0.27022	NA	0.297	NA	4.049374
1247	22	32547012	32547012	G	A	intronic	C22orf42	NA	NA	NA	intronic	ENSG00000205856	NA	NA	NA	NA	NA	22q12.3	NA	NA	Name=5	NA	rs3888536	0.22	0.22	0.213	0.302516	0.326	0.1409	0.2075	0.4198	0.3538	0.28	0.1	0.21	0.3	0.2969	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.073527	NA	NA	0.328256	0.376986	NA	0.312	NA	4.048844
1247	9	127956805	127956805	C	G	intergenic	PPP6C,RABEPK	dist=4587;dist=6016	NA	NA	downstream	ENSG00000235332	NA	NA	NA	NA	NA	9q33.3	NA	NA	Name=8	NA	rs359585	0.45	0.45	0.431	0.45607	0.4513	0.5446	0.3473	0.4682	0.4305	0.42	0.55	0.38	0.43	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-3.006749	NA	NA	NA	NA	NA	0.435	NA	4.0487
1247	12	31131712	31131712	T	C	intronic	TSPAN11	NA	NA	NA	intronic	ENSG00000110900	NA	NA	NA	NA	NA	12p11.21	NA	NA	Name=24	NA	rs35097	0.9	0.9	0.894	0.898163	0.9513	0.9058	0.9352	0.8033	0.9376	0.95	0.91	0.94	0.79	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.146269	NA	NA	NA	NA	NA	0.891	NA	4.0487
1247	6	31084075	31084075	G	C	exonic	CDSN	NA	synonymous SNV	CDSN:NM_001264:exon2:c.C1317G:p.S439S	exonic	ENSG00000204539	NA	synonymous SNV	ENSG00000204539:ENST00000376288:exon2:c.C1317G:p.S439S	NA	NA	6p21.33	NA	NA	NA	NA	rs3130982	0.62	0.62	0.581	0.631989	0.5477	0.7034	0.6138	0.702	0.5634	0.53	0.68	0.62	0.68	0.5624	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.159988	NA	NA	0.508372	0.661825	NA	0.507	NA	4.0481946
1247	16	69959223	69959223	G	A	UTR5	WWP2	NM_199424:c.-4811G>A	NA	NA	UTR5	ENSG00000198373	ENST00000568684:c.-4811G>A	NA	NA	NA	NA	16q22.1	NA	NA	NA	NA	rs2270838	0.45	0.45	0.442	0.496406	0.2853	0.4643	0.4092	0.7519	0.4632	0.27	0.45	0.43	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.631364	NA	NA	NA	NA	NA	0.464	NA	4.0480334
1247	2	112698388	112698388	G	A	intronic	MERTK	NA	NA	NA	ncRNA_exonic	ENSG00000225496	NA	NA	NA	NA	NA	2q13	NA	NA	NA	NA	rs11674226	0.16	0.16	0.163	0.170527	0.2853	0.1726	0.1844	0.0287	0.2321	0.25	0.12	0.22	0.02	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.836378	NA	NA	NA	NA	NA	0.188	NA	4.0480333
1247	3	68587884	68587884	A	C	intronic	FAM19A1	NA	NA	NA	intronic	ENSG00000183662	NA	NA	NA	NA	NA	3p14.1	NA	NA	Name=2	NA	rs3828366	0.22	0.22	0.201	0.21266	0.333	0.123	0.3617	0.1725	0.1299	0.32	0.08	0.36	0.15	0.2834	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.825529	NA	NA	0.335862	0.190329	NA	0.181	NA	4.047738
1247	11	67554590	67554590	A	G	intergenic	ALDH3B2,FAM86C2P	dist=105905;dist=4648	NA	NA	ncRNA_exonic	ENSG00000227620	NA	NA	NA	NA	NA	11q13.2	Score=900;Name=V$CEBPA_01	NA	NA	NA	rs10896226	0.98	0.98	0.98	0.966054	0.9523	0.997	0.9726	0.9622	0.9489	0.99	0.99	0.98	0.96	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.221913	NA	NA	NA	NA	NA	0.971	NA	4.0477
1247	17	7658029	7658029	G	T	ncRNA_exonic	RPL29P2	NA	NA	NA	ncRNA_exonic	ENSG00000240480	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs307624	0.69	0.69	0.702	0.73103	0.6193	0.8929	0.6081	0.6551	0.8691	0.61	0.88	0.61	0.66	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.518773	NA	NA	NA	NA	NA	0.696	NA	4.0473666
1247	2	187532373	187532373	T	G	intronic	ITGAV	NA	NA	NA	ncRNA_intronic	ENSG00000227227	NA	NA	NA	NA	NA	2q32.1	NA	NA	NA	NA	rs2595391	0.05	0.05	0.039	0.0597045	0.0944	0.003	0.0533	0.0386	0.1155	0.1	0.0017	0.05	0.03	0.0852	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.413632	3.413632	NA	0.106628	0.061961	NA	0.036	NA	4.0471053
1247	22	30414091	30414091	C	T	intronic	MTMR3	NA	NA	NA	ncRNA_intronic	ENSG00000227117	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs11705418	0.09	0.09	0.083	0.0916534	0.0895	0.0794	0.1009	0.0726	0.1258	0.1	0.08	0.09	0.08	0.1052	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.162279	NA	NA	0.091744	0.069678	NA	0.072	NA	4.0468893
1247	7	100550079	100550079	A	C	intergenic	ACHE,MUC12	dist=56538;dist=62825	NA	NA	exonic	ENSG00000228273	NA	synonymous SNV	ENSG00000228273:ENST00000379458:exon2:c.A660C:p.S220S	NA	NA	7q22.1	NA	NA	NA	NA	rs28379747	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4539	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.44662	NA	NA	NA	NA	NA	0.42	NA	4.0461
1247	11	1101649	1101649	T	C	exonic	MUC2	NA	synonymous SNV	MUC2:NM_002457:exon43:c.T7650C:p.P2550P	exonic	ENSG00000198788	NA	synonymous SNV	ENSG00000198788:ENST00000441003:exon42:c.T7662C:p.P2554P	NA	NA	11p15.5	NA	NA	NA	NA	rs7480563	0.7	0.7	0.679	0.697284	0.5219	0.9931	0.6196	0.6808	0.6503	0.53	1	0.57	0.7	0.5819	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.075868	NA	NA	0.517102	0.618579	ID=COSM428399;OCCURENCE=1(breast)	0.572	NA	4.0457646
1247	1	100671866	100671866	T	A	intronic	DBT	NA	NA	NA	intronic	ENSG00000137992	NA	NA	NA	NA	NA	1p21.2	NA	NA	NA	NA	rs34229137	0.24	0.24	NA	0.268371	0.3877	0.25	0.4251	0.0772	0.3119	0.31	0.19	0.35	0.08	0.3586	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.336877	NA	NA	0.207984	0.053482	NA	0.196	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000079929.1|RCV000124663.1;CLNDSDB=.|.;CLNDSDBID=.|.	4.045716
1247	5	162866548	162866548	T	C	intronic	CCNG1	NA	NA	NA	intronic	ENSG00000113328,ENSG00000268800	NA	NA	NA	NA	NA	5q34	NA	Name=MafK_(ab50322)	NA	NA	rs299322	0.43	0.43	0.446	0.423522	0.3002	0.5377	0.3314	0.5961	0.2648	0.32	0.53	0.35	0.54	0.3575	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.601324	NA	NA	0.296697	0.560145	NA	0.435	NA	4.045603
1248	8	21895146	21895146	A	G	downstream	NPM2	NA	NA	NA	downstream	ENSG00000158806	NA	NA	NA	NA	NA	8p21.3	NA	Name=CTCF,TCF4	Name=2	NA	rs11992609	0.46	0.46	0.414	0.451278	0.5149	0.4147	0.6268	0.2625	0.5542	0.51	0.43	0.61	0.29	0.5523	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.12697	NA	NA	0.554997	0.307078	NA	0.42	NA	4.0444696
1248	11	118037564	118037564	G	A	UTR3	SCN2B	NM_004588:c.*38C>T	NA	NA	UTR3	ENSG00000149575	ENST00000278947:c.*38C>T	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs8192614	0.07	0.07	0.066	0.0780751	0.1054	0.0139	0.0605	0.112	0.0828	0.1	0.01	0.07	0.1	0.0908	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.071931	NA	NA	0.092761	0.102955	NA	0.043	NA	4.0443724
1248	10	106907440	106907440	C	T	exonic	SORCS3	NA	synonymous SNV	SORCS3:NM_014978:exon9:c.C1368T:p.N456N	exonic	ENSG00000156395	NA	synonymous SNV	ENSG00000156395:ENST00000369701:exon9:c.C1368T:p.N456N	NA	NA	10q25.1	NA	NA	NA	NA	rs791125	0.49	0.49	0.479	0.489018	0.5467	0.3492	0.6268	0.4803	0.4877	0.54	0.32	0.64	0.52	0.531	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.830927	NA	NA	0.545116	0.486382	NA	0.355	NA	4.0438506
1248	12	31255263	31255263	G	A	intronic	DDX11	NA	NA	NA	exonic	ENSG00000013573	NA	unknown	UNKNOWN	NA	NA	12p11.21	NA	NA	NA	NA	rs10771803	0.6	0.6	0.602	0.661142	0.492	0.8105	0.6412	0.7201	0.6155	0.39	0.79	0.55	0.72	0.5334	0.79	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	-1.019	T	0.000	T	.	1.959	12.51	-0.148	-0.612	0.599	4.893	1.9591	1.9591	NA	0.43093	0.671584	NA	0.362	NA	4.04367
1248	9	74834384	74834384	C	T	intronic	GDA	NA	NA	NA	intronic	ENSG00000119125	NA	NA	NA	Score=446;Name=lod=87	NA	9q21.13	NA	NA	NA	NA	rs10869148	0.34	0.34	0.331	0.335863	0.3101	0.5377	0.3084	0.1687	0.3998	0.31	0.55	0.29	0.16	0.3277	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.704604	NA	NA	0.318605	0.207766	NA	0.246	NA	4.043595
1248	4	190903688	190903688	C	T	intergenic	FRG1,LOC100288255	dist=19329;dist=41835	NA	NA	ncRNA_exonic	ENSG00000251297	NA	NA	NA	Score=847;Name=lod=3675	NA	4q35.2	NA	NA	NA	NA	rs2077107	0.31	0.31	0.317	0.285942	0.333	0.2619	0.2421	0.292	0.2853	0.34	0.27	0.31	0.33	0.2952	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.070604	NA	1	0.328605	0.291875	NA	0.275	NA	4.043195
1248	8	38876468	38876468	C	T	intronic	ADAM9	NA	NA	NA	intronic	ENSG00000168615	NA	NA	NA	Score=295;Name=lod=21	NA	8p11.22	NA	NA	NA	NA	rs6474519	0.47	0.47	0.028	0.455072	0.4672	0.7282	0.5231	0.2859	0.3415	0.43	0.65	0.49	0.3	0.4559	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.746438	NA	NA	0.034419	0.021108	NA	NA	NA	4.042481
1248	8	142221874	142221874	A	G	intronic	SLC45A4	NA	NA	NA	UTR3	ENSG00000022567	ENST00000519067:c.*416T>C	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs3739239	0.16	0.16	0.134	0.16234	0.1243	0.3552	0.1239	0.0159	0.228	0.1	0.35	0.15	0.02	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.183615	NA	NA	NA	NA	NA	0.116	NA	4.0423667
1248	1	57395020	57395020	A	G	UTR3	C8B	NM_000066:c.*57T>C	NA	NA	UTR3	ENSG00000021852	ENST00000371237:c.*57T>C,ENST00000543257:c.*57T>C	NA	NA	NA	NA	1p32.2	NA	NA	NA	NA	rs2795	0.34	0.34	0.287	0.367212	0.2913	0.5218	0.4107	0.1861	0.5	0.3	0.49	0.36	0.21	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.302199	2.302199	NA	NA	NA	NA	0.123	NA	4.0420334
1248	14	24760009	24760009	G	A	UTR3	DHRS1	NM_001136050:c.*56C>T,NM_138452:c.*56C>T	NA	NA	UTR3	ENSG00000157379	ENST00000288111:c.*56C>T,ENST00000396813:c.*56C>T,ENST00000558340:c.*792C>T	NA	NA	NA	NA	14q12	NA	NA	NA	NA	rs4568	0.4	0.4	0.386	0.440895	0.2913	0.7143	0.2839	0.3404	0.5603	0.28	0.69	0.31	0.3	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.070753	NA	NA	NA	NA	NA	0.261	NA	4.0420334
1248	5	118890915	118890915	A	G	intergenic	HSD17B4,FAM170A	dist=12885;dist=74339	NA	NA	downstream	ENSG00000249919	NA	NA	NA	Score=295;Name=lod=21	NA	5q23.1	NA	NA	NA	NA	rs246965	0.44	0.44	0.449	0.437101	0.4583	0.4901	0.3631	0.3638	0.5123	0.44	0.52	0.4	0.39	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.372751	NA	NA	NA	NA	NA	0.471	NA	4.0417
1248	11	121489416	121489416	G	A	intronic	SORL1	NA	NA	NA	intronic	ENSG00000137642	NA	NA	NA	NA	NA	11q24.1	NA	NA	Name=15	NA	rs1784933	0.77	0.77	0.746	0.769968	0.9583	0.6964	0.8329	0.5499	0.9049	0.96	0.66	0.83	0.57	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.956121	NA	NA	NA	NA	NA	0.761	NA	4.0417
1248	19	4333666	4333666	T	C	intronic	STAP2	NA	NA	NA	intronic	ENSG00000178078	NA	NA	NA	NA	NA	19p13.3	NA	Name=USF-1	NA	NA	rs10413905	0.4	0.4	0.372	0.371206	0.3012	0.5982	0.3228	0.4123	0.1881	0.3	0.59	0.3	0.4	0.3309	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.814963	NA	NA	0.326279	0.379709	NA	0.326	NA	4.041621
1248	16	29906546	29906546	C	T	intronic	SEZ6L2	NA	NA	NA	intronic	ENSG00000174938	NA	NA	NA	NA	Name=Response to taxane treatment (placlitaxel)	16p11.2	NA	NA	NA	NA	rs4787484	0.29	0.29	0.252	0.249401	0.328	0.4077	0.2248	0.1498	0.1575	0.34	0.38	0.25	0.12	0.2945	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.607892	NA	NA	0.33593	0.145426	NA	0.174	NA	4.04157
1248	22	39064209	39064209	G	A	intronic	CBY1	NA	NA	NA	ncRNA_exonic	ENSG00000228274	NA	NA	NA	NA	NA	22q13.1	NA	NA	NA	NA	rs2072795	0.31	0.31	0.309	0.285144	0.2922	0.3502	0.2032	0.289	0.2638	0.3	0.38	0.23	0.31	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.204116	NA	NA	NA	NA	NA	0.326	NA	4.0411333
1248	14	21945415	21945415	A	G	UTR5	TOX4	NM_014828:c.-23A>G	NA	NA	UTR5	ENSG00000092203	ENST00000405508:c.-23A>G,ENST00000262709:c.-23A>G,ENST00000455393:c.-23A>G,ENST00000448790:c.-23A>G,ENST00000457430:c.-23A>G,ENST00000447695:c.-23A>G,ENST00000455138:c.-23A>G	NA	NA	NA	NA	14q11.2	NA	Name=FOXA1_(SC-101058),ELF1_(SC-631),Rad21,NF-YB,HNF4G_(SC-6558),p300,CTCF,CHD2_(N-1250),MafK_(SC-477),NF-YA,TAF1,ETS1,GABP,Pol2(phosphoS2),HNF4A,Pol2,SP1,PU.1,BRCA1_(C-1863),YY1_(C-20),NFKB,HEY1,ZBTB7A_(SC-34508),c-Myc,USF-1,IRF1,TBP,FOSL2,NANOG_(SC-33759),Egr-1,RFX5_(N-494),ZNF263,Pol2-4H8,Sin3Ak-20	NA	NA	rs2282046	0.39	0.39	0.364	0.401757	0.4364	0.2649	0.4236	0.4531	0.4223	0.44	0.26	0.44	0.45	0.4189	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.824356	NA	NA	0.437209	0.423967	NA	0.406	NA	4.0408244
1248	8	27319292	27319292	A	G	intronic	CHRNA2	NA	NA	NA	intronic	ENSG00000120903	NA	NA	NA	NA	NA	8p21.2	NA	Name=HNF4A,CTCF,Rad21,HNF4G_(SC-6558),CTCF_(SC-5916),Pol2-4H8,HNF4A_(H-171)	NA	NA	rs735421	0.25	0.25	0.225	0.235224	0.333	0.2579	0.3127	0.0976	0.2423	0.33	0.23	0.32	0.12	0.3067	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.035066	NA	NA	0.319651	0.140263	NA	0.217	NA	4.040649
1248	20	17459928	17459928	A	T	intronic	PCSK2	NA	NA	NA	ncRNA_exonic	ENSG00000232241	NA	NA	NA	NA	NA	20p12.1	NA	NA	NA	NA	rs3790336	0.39	0.39	0.378	0.382588	0.2932	0.3512	0.3228	0.6014	0.2536	0.3	0.36	0.31	0.63	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.001695	NA	NA	NA	NA	NA	0.341	NA	4.0401333
1248	22	39066820	39066820	C	T	intronic	CBY1	NA	NA	NA	ncRNA_exonic	ENSG00000228274	NA	NA	NA	NA	NA	22q13.1	NA	NA	NA	NA	rs3761454	0.31	0.31	0.319	0.285743	0.2932	0.3512	0.2032	0.2897	0.2638	0.3	0.38	0.23	0.31	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.060242	NA	NA	NA	NA	NA	0.333	NA	4.0401333
1248	9	130286150	130286150	A	G	intronic	FAM129B	NA	NA	NA	intronic	ENSG00000136830	NA	NA	NA	NA	NA	9q33.3	NA	Name=Ini1	Name=2	NA	rs2251409	0.58	0.58	0.547	0.570088	0.6799	0.3661	0.6888	0.5983	0.545	0.69	0.36	0.67	0.61	0.6294	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.717094	NA	NA	0.650581	0.639582	NA	0.565	NA	4.040119
1248	7	142148878	142148878	T	C	intergenic	LOC730441,MTRNR2L6	dist=176810;dist=225253	NA	NA	downstream	ENSG00000211725	NA	NA	NA	NA	NA	7q34	NA	NA	Name=2	NA	rs370978147	NA	NA	NA	0.000199681	NA	0.001	NA	NA	NA	NA	NA	NA	NA	0.4599	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.625006	NA	NA	NA	NA	NA	0.014	NA	4.0401
1248	10	115423094	115423094	G	C	intronic	NRAP	NA	NA	NA	intronic	ENSG00000197893	NA	NA	NA	NA	NA	10q25.3	NA	NA	Name=11	NA	rs12770981	0.3	0.3	0.284	0.302716	0.332	0.4028	0.2795	0.1732	0.3609	0.31	0.41	0.31	0.17	0.3172	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.734349	NA	NA	0.311512	0.189514	ID=COSN163764;OCCURENCE=1(breast)	0.21	NA	4.039288
1248	10	5952854	5952854	C	T	intronic	FBXO18	NA	NA	NA	intronic	ENSG00000134452	NA	NA	NA	NA	NA	10p15.1	NA	NA	Name=12	NA	rs7067928	0.23	0.23	0.226	0.193091	0.3479	0.0317	0.2089	0.2428	0.1217	0.36	0.02	0.27	0.24	0.273	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.064257	NA	NA	0.339884	0.241489	NA	0.261	NA	4.039216
1248	17	3632952	3632952	C	T	intronic	ITGAE	NA	NA	NA	ncRNA_intronic	ENSG00000262358	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs2915554	0.22	0.22	0.22	0.250599	0.2942	0.2956	0.134	0.0507	0.5123	0.3	0.3	0.15	0.05	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.927216	NA	NA	NA	NA	NA	0.268	NA	4.0391333
1248	6	133135864	133135864	T	G	intronic	RPS12	NA	NA	NA	intronic	ENSG00000112306	NA	NA	NA	NA	NA	6q23.2	NA	Name=NFKB,HEY1,PAX5-N19,TAF1,Pol2(b),GATA-1,Pol2,MEF2C_(SC-13268),BCL11A,YY1_(C-20),Pol2-4H8	NA	NA	rs12202302	0.32	0.32	0.273	0.339457	0.3012	0.2282	0.5303	0.3457	0.3497	0.29	0.24	0.51	0.31	0.3387	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.671998	NA	NA	0.321047	0.330458	NA	0.261	NA	4.039053
1248	11	94212048	94212048	C	T	intronic	MRE11A	NA	NA	NA	intronic	ENSG00000020922	NA	NA	NA	NA	NA	11q21	NA	NA	NA	NA	rs535801	0.33	0.33	0.309	0.313099	0.335	0.3859	0.3862	0.171	0.3558	0.32	0.43	0.39	0.19	0.3252	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.457227	NA	NA	0.30107	0.208087	NA	0.326	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117634.2;CLNDSDB=.;CLNDSDBID=.	4.03873
1248	19	50475114	50475114	G	C	ncRNA_intronic	SIGLEC16	NA	NA	NA	ncRNA_exonic	ENSG00000161643	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs8111526	0.48	0.48	0.473	0.495407	0.2545	0.7431	0.4251	0.5507	0.4632	0.24	0.76	0.4	0.58	0.3737	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.873022	NA	NA	NA	NA	NA	0.377	NA	4.0384666
1248	12	48272743	48272743	G	A	intronic	VDR	NA	NA	NA	UTR5;UTR3	ENSG00000111424;ENSG00000111424	ENST00000535672:c.-95C>T;ENST00000547065:c.*4C>T	NA	NA	NA	NA	12q13.11	NA	NA	NA	NA	rs10783218	0.09	0.09	0.102	0.0938498	0.0427	0.0556	0.0447	0.2163	0.0552	0.04	0.07	0.04	0.22	0.0499	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.967495	NA	NA	0.036047	0.170449	NA	0.109	NA	4.0380197
1248	7	142148919	142148919	C	T	intergenic	LOC730441,MTRNR2L6	dist=176851;dist=225212	NA	NA	downstream	ENSG00000211725	NA	NA	NA	NA	NA	7q34	NA	NA	Name=2	NA	rs376682174	NA	NA	NA	0.000399361	0.001	NA	NA	0.0008	NA	NA	NA	NA	NA	0.4611	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.731095	NA	NA	NA	NA	NA	0.007	NA	4.0379
1248	4	75040944	75040944	T	G	intronic	MTHFD2L	NA	NA	NA	intronic	ENSG00000163738	NA	NA	NA	NA	NA	4q13.3	NA	NA	Name=15	NA	rs13116686	0.76	0.76	0.731	0.721845	0.9622	0.8403	0.8905	0.2912	0.8149	0.95	0.85	0.88	0.29	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.177551	NA	NA	NA	NA	NA	0.703	NA	4.0378
1248	11	9802952	9802952	A	C	ncRNA_intronic	SBF2-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000246273	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs3763862	0.45	0.45	0.428	0.409744	0.6292	0.3522	0.5216	0.27	0.3528	0.65	0.33	0.48	0.25	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.382845	NA	NA	NA	NA	NA	0.457	NA	4.0374666
1248	6	102503196	102503196	C	T	intronic	GRIK2	NA	NA	NA	intronic	ENSG00000164418	NA	NA	NA	NA	NA	6q16.3	NA	NA	NA	NA	rs2227281	0.31	0.31	0.301	0.273762	0.332	0.3601	0.3012	0.1884	0.2209	0.36	0.35	0.27	0.21	0.3058	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.413253	NA	NA	0.325	0.224467	NA	0.42	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117163.2;CLNDSDB=.;CLNDSDBID=.	4.0372
1248	19	1986414	1986414	G	A	UTR3	BTBD2	NM_017797:c.*73C>T	NA	NA	UTR3	ENSG00000133243	ENST00000255608:c.*73C>T	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs2286352	0.39	0.39	0.367	0.404553	0.2962	0.5972	0.3473	0.3737	0.3998	0.29	0.56	0.34	0.38	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.242608	NA	NA	NA	NA	NA	0.435	NA	4.0371334
1248	19	52471769	52471769	C	T	intronic	ZNF350	NA	NA	NA	ncRNA_intronic	ENSG00000269235	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs2278417	0.38	0.38	0.415	0.457867	0.2962	0.2966	0.3012	0.6762	0.6063	0.31	0.27	0.33	0.67	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.635506	NA	NA	NA	NA	NA	0.435	NA	4.0371333
1248	5	32523343	32523343	C	T	intergenic	ZFR,SUB1	dist=78499;dist=62262	NA	NA	ncRNA_exonic	ENSG00000249142	NA	NA	NA	Score=593;Name=lod=344	NA	5p13.3	NA	NA	NA	NA	rs2457151	0.88	0.88	0.889	0.878195	0.9632	0.7679	0.9265	0.8464	0.9131	0.97	0.77	0.93	0.85	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.643112	1.643112	NA	NA	NA	NA	0.913	NA	4.0368
1248	7	66010577	66010577	C	T	intergenic	LINC00174,LOC493754	dist=145182;dist=7976	NA	NA	downstream	ENSG00000232559,ENSG00000234500	NA	NA	NA	Score=472;Name=lod=110	NA	7q11.21	NA	NA	NA	NA	rs801217	0.46	0.46	0.456	0.457069	0.4632	0.2669	0.4539	0.6868	0.3384	0.45	0.24	0.46	0.72	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.73411	NA	NA	NA	NA	NA	0.413	NA	4.0368
1248	14	106209031	106209031	G	A	intergenic	ELK2AP,KIAA0125	dist=69887;dist=174807	NA	NA	intronic	ENSG00000211896	NA	NA	NA	NA	NA	14q32.33	NA	Name=Pol2	NA	NA	rs10139901	0.29	0.29	0.292	0.262979	0.6302	0.0159	0.3804	0.0234	0.3804	0.62	0.01	0.4	0.02	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.051498	NA	NA	NA	NA	NA	0.333	NA	4.0364667
1248	7	142099421	142099421	G	A	intergenic	LOC730441,MTRNR2L6	dist=127353;dist=274710	NA	NA	downstream	ENSG00000229200	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	NA	NA	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4638	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.736889	NA	NA	NA	NA	NA	NA	NA	4.0362
1248	5	178349297	178349297	C	A	intronic	ZFP2	NA	NA	NA	ncRNA_exonic	ENSG00000253869	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs17663795	0.27	0.27	0.252	0.27516	0.2972	0.3532	0.2709	0.1029	0.408	0.3	0.37	0.28	0.1	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.381022	NA	NA	NA	NA	NA	0.188	NA	4.0361333
1248	22	39141600	39141600	G	A	intronic	SUN2	NA	NA	NA	ncRNA_intronic	ENSG00000225450	NA	NA	NA	NA	NA	22q13.1	NA	NA	NA	NA	rs138712	0.38	0.38	0.404	0.363419	0.2972	0.4573	0.2046	0.4826	0.2863	0.31	0.49	0.23	0.47	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.130688	NA	NA	NA	NA	NA	0.37	NA	4.0361333
1248	2	169789016	169789016	T	C	exonic	ABCB11	NA	synonymous SNV	ABCB11:NM_003742:exon24:c.A3084G:p.A1028A	exonic	ENSG00000073734	NA	synonymous SNV	ENSG00000073734:ENST00000263817:exon24:c.A3084G:p.A1028A	NA	NA	2q31.1	NA	NA	NA	NA	rs497692	0.48	0.48	0.44	0.496805	0.5318	0.6409	0.5086	0.2254	0.6708	0.53	0.62	0.51	0.22	0.5557	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.57433	NA	NA	0.544107	0.268062	ID=COSM148984;OCCURENCE=1(stomach)	0.348	NA	4.0350596
1249	1	227069737	227069737	C	T	exonic	PSEN2	NA	synonymous SNV	PSEN2:NM_000447:exon4:c.C129T:p.N43N,PSEN2:NM_012486:exon4:c.C129T:p.N43N	exonic	ENSG00000143801	NA	synonymous SNV	ENSG00000143801:ENST00000496965:exon1:c.C129T:p.N43N,ENSG00000143801:ENST00000391872:exon2:c.C228T:p.N76N,ENSG00000143801:ENST00000495488:exon3:c.C129T:p.N43N,ENSG00000143801:ENST00000340188:exon4:c.C129T:p.N43N,ENSG00000143801:ENST00000366782:exon4:c.C228T:p.N76N,ENSG00000143801:ENST00000366783:exon4:c.C129T:p.N43N,ENSG00000143801:ENST00000422240:exon4:c.C129T:p.N43N	NA	NA	1q42.13	NA	NA	NA	NA	rs6759	0.48	0.48	0.469	0.443291	0.5934	0.3859	0.4827	0.3646	0.4264	0.6	0.41	0.53	0.35	0.4995	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.51489	NA	NA	0.538846	0.393327	NA	0.587	NA	4.0349206
1249	1	36923494	36923494	G	C	intronic	MRPS15	NA	NA	NA	intronic	ENSG00000116898	NA	NA	NA	NA	NA	1p34.3	NA	NA	Name=15	NA	rs12023818	0.2	0.2	0.172	0.225439	0.33	0.121	0.2003	0.1067	0.4039	0.33	0.09	0.25	0.1	0.2994	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.563195	NA	NA	0.335698	0.16069	NA	0.145	NA	4.034902
1249	19	36223111	36223111	C	G	intronic	MLL4	NA	NA	NA	ncRNA_intronic	ENSG00000105663	NA	NA	NA	NA	NA	19q13.12	NA	NA	NA	NA	rs61351824	NA	NA	NA	0.0319489	0.0875	NA	0.0519	0.0053	0.0297	NA	NA	NA	NA	0.1006	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.540597	NA	NA	0.111327	0.020502	NA	0.014	NA	4.0339063
1249	9	77668969	77668969	G	C	intergenic	C9orf41,NMRK1	dist=25659;dist=7147	NA	NA	intergenic	ENSG00000156017,ENSG00000106733	dist=25630;dist=6520	NA	NA	NA	NA	9q21.13	NA	Name=PAX5-C20,PU.1	Name=5	NA	rs773145	0.52	0.52	0.563	0.516174	0.4394	0.5744	0.4798	0.652	0.3773	0.42	0.6	0.43	0.64	0.4521	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.06765	NA	NA	0.408086	0.638128	NA	0.493	NA	4.0337474
1249	7	76255019	76255019	T	C	ncRNA_intronic	LOC100133091	NA	NA	NA	ncRNA_intronic	ENSG00000205485	NA	NA	NA	NA	NA	7q11.23	NA	NA	NA	NA	rs56046726	0.18	0.18	0.154	0.188299	0.2097	0.2272	0.2637	0.0408	0.272	0.2	0.21	0.24	0.04	0.2139	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.418309	NA	NA	0.209535	0.083976	NA	0.109	NA	4.0335316
1249	7	142148881	142148881	C	A	intergenic	LOC730441,MTRNR2L6	dist=176813;dist=225250	NA	NA	downstream	ENSG00000211725	NA	NA	NA	NA	NA	7q34	NA	NA	Name=2	NA	rs374566766	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4667	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.886106	NA	NA	NA	NA	NA	0.014	NA	4.0333
1249	2	141571329	141571329	T	C	exonic	LRP1B	NA	synonymous SNV	LRP1B:NM_018557:exon32:c.A5256G:p.S1752S	exonic	ENSG00000168702	NA	synonymous SNV	ENSG00000168702:ENST00000389484:exon32:c.A5256G:p.S1752S	NA	NA	2q22.1	Score=766;Name=V$STAT1_01	NA	NA	NA	rs3749010	0.86	0.86	0.853	0.845248	0.8748	0.9871	0.7709	0.6974	0.9213	0.88	0.98	0.8	0.74	0.8708	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.120155	NA	NA	0.887791	0.737857	NA	0.797	NA	4.0332756
1249	5	74324437	74324437	G	A	UTR3	GCNT4	NM_016591:c.*64C>T	NA	NA	UTR3	ENSG00000176928	ENST00000322348:c.*64C>T	NA	NA	NA	NA	5q13.3	NA	NA	NA	NA	rs3811986	0.41	0.41	0.415	0.436701	0.3002	0.2897	0.3732	0.7504	0.3497	0.31	0.28	0.34	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.457962	NA	NA	NA	NA	NA	0.442	NA	4.0331334
1249	11	61548559	61548559	A	G	intronic	MYRF	NA	NA	NA	intronic	ENSG00000124920	NA	NA	NA	NA	NA	11q12.2	NA	Name=CTCF,c-Myc	Name=3	NA	rs509360	0.5	0.5	0.42	0.436502	0.7058	0.5744	0.7939	0.0817	0.2434	0.69	0.42	0.77	0.12	0.5878	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.872707	NA	NA	0.673529	0.193688	NA	0.464	NA	4.032871
1249	22	23982724	23982724	T	C	ncRNA_intronic	GUSBP11	NA	NA	NA	ncRNA_exonic	ENSG00000234353	NA	NA	NA	NA	NA	22q11.23	NA	NA	NA	NA	rs56397271	0.72	0.72	0.725	0.7498	0.6342	0.6647	0.7378	0.9516	0.6922	0.64	0.64	0.69	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.254172	NA	NA	NA	NA	NA	0.833	NA	4.0324666
1249	22	23982727	23982727	A	G	ncRNA_intronic	GUSBP11	NA	NA	NA	ncRNA_exonic	ENSG00000234353	NA	NA	NA	NA	NA	22q11.23	NA	NA	NA	NA	rs28645846	0.72	0.72	0.737	0.7498	0.6342	0.6647	0.7378	0.9516	0.6922	0.64	0.65	0.69	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.143458	NA	NA	NA	NA	NA	0.833	NA	4.0324666
1249	7	142099425	142099425	A	G	intergenic	LOC730441,MTRNR2L6	dist=127357;dist=274706	NA	NA	downstream	ENSG00000229200	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	NA	NA	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4679	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.064588	NA	NA	NA	NA	NA	NA	NA	4.0321
1249	6	31084792	31084792	C	T	exonic	CDSN	NA	synonymous SNV	CDSN:NM_001264:exon2:c.G600A:p.Q200Q	exonic	ENSG00000204539	NA	synonymous SNV	ENSG00000204539:ENST00000376288:exon2:c.G600A:p.Q200Q	NA	NA	6p21.33	NA	NA	NA	NA	rs3130983	0.62	0.62	0.594	0.646965	0.5487	0.7113	0.6138	0.7065	0.6247	0.53	0.68	0.62	0.68	0.5765	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.101417	NA	NA	0.509651	0.662279	NA	0.572	NA	4.0318156
1249	6	31084684	31084684	G	A	exonic	CDSN	NA	synonymous SNV	CDSN:NM_001264:exon2:c.C708T:p.S236S	exonic	ENSG00000204539	NA	synonymous SNV	ENSG00000204539:ENST00000376288:exon2:c.C708T:p.S236S	NA	NA	6p21.33	NA	NA	NA	NA	rs3094215	0.62	0.62	0.587	0.646965	0.5487	0.7113	0.6138	0.7065	0.6247	0.53	0.68	0.62	0.68	0.5772	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.467004	NA	NA	0.50907	0.661371	NA	0.565	NA	4.0316966
1249	9	138012070	138012070	G	A	UTR3	OLFM1	NM_014279:c.*46G>A	NA	NA	UTR3	ENSG00000130558	ENST00000252854:c.*46G>A,ENST00000371796:c.*46G>A,ENST00000371793:c.*46G>A	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs11103684	0.06	0.06	0.066	0.0593051	0.1054	NA	0.0793	0.0575	0.0613	0.09	NA	0.09	0.05	0.0891	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.015755	NA	NA	0.107674	0.080118	NA	0.029	NA	4.0311594
1249	7	138087882	138087882	A	G	intergenic	MIR4468,TRIM24	dist=279315;dist=57197	NA	NA	intergenic	ENSG00000213238,ENSG00000213237	dist=104653;dist=1058	NA	NA	Score=562;Name=lod=256	NA	7q33	NA	NA	NA	NA	rs374284	0.27	0.27	0.219	0.259385	0.3032	0.3968	0.2666	0.0613	0.3354	0.31	0.39	0.27	0.06	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.56354	NA	NA	NA	NA	NA	0.217	NA	4.0301334
1249	6	160206631	160206631	T	C	ncRNA_exonic	SNORA29	NA	NA	NA	ncRNA_exonic	ENSG00000206910	NA	NA	NA	NA	NA	6q25.3	NA	NA	Name=3	NA	rs3818299	0.39	0.39	0.365	0.392173	0.5437	0.1637	0.6081	0.2648	0.4908	0.55	0.15	0.59	0.27	0.527	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.091532	NA	NA	0.566298	0.29395	NA	0.348	NA	4.0296686
1249	8	41519462	41519462	A	G	intronic	ANK1	NA	NA	NA	ncRNA_intronic	ENSG00000253389	NA	NA	NA	Score=423;Name=lod=70	Name=Type 2 diabetes	8p11.21	NA	NA	NA	NA	rs515071	0.78	0.78	0.768	0.786342	0.7674	0.8155	0.7853	0.7625	0.8088	0.79	0.8	0.74	0.76	0.7805	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.384411	NA	NA	0.756628	0.736723	NA	0.717	NA	4.0288053
1249	1	202536848	202536848	C	T	intronic	PPP1R12B	NA	NA	NA	intronic	ENSG00000077157	NA	NA	NA	NA	NA	1q32.1	NA	NA	Name=86	NA	rs2292489	0.47	0.47	0.431	0.475839	0.4861	0.7242	0.6009	0.1172	0.6053	0.51	0.7	0.54	0.11	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.587397	NA	NA	0.485229	0.182081	NA	0.435	NA	4.028671
1249	22	36907098	36907098	T	C	intronic	EIF3D	NA	NA	NA	intronic	ENSG00000100353	NA	NA	NA	NA	NA	22q12.3	NA	Name=Pol2-4H8,CTCF,Rad21	Name=130	NA	rs728785	0.51	0.51	0.468	0.457867	0.668	0.2103	0.7147	0.447	0.3292	0.67	0.25	0.72	0.43	0.6014	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.889064	NA	NA	0.702326	0.475261	NA	0.572	NA	4.028274
1249	8	24358219	24358219	A	G	intronic	ADAM7	NA	NA	NA	ncRNA_intronic	ENSG00000253535,ENSG00000253643	NA	NA	NA	NA	NA	8p21.2	NA	NA	NA	NA	rs17739399	0.27	0.27	0.241	0.285942	0.3052	0.1915	0.4323	0.1755	0.409	0.31	0.2	0.42	0.17	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.056799	NA	NA	NA	NA	NA	0.203	NA	4.0281333
1249	1	186151493	186151493	C	G	ncRNA_intronic	MIR548F1	NA	NA	NA	intronic	ENSG00000143341	NA	NA	NA	NA	NA	1q31.1	NA	NA	NA	NA	rs16825040	0.24	0.24	0.238	0.228435	0.3062	0.0923	0.1787	0.3192	0.2014	0.32	0.07	0.25	0.32	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.25653	NA	NA	NA	NA	NA	0.123	NA	4.0271333
1249	12	20705540	20705540	C	T	intronic	PDE3A	NA	NA	NA	ncRNA_exonic	ENSG00000256663	NA	NA	NA	NA	NA	12p12.2	NA	NA	NA	NA	rs73075198	0.2	0.2	0.161	0.189896	0.3062	0.2321	0.1499	0.0197	0.2853	0.3	0.24	0.14	0.03	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.430119	NA	NA	NA	NA	NA	0.181	NA	4.0271333
1249	6	152629617	152629617	C	T	intronic	SYNE1	NA	NA	NA	intronic	ENSG00000131018	NA	NA	NA	NA	NA	6q25.2	NA	NA	NA	NA	rs9383985	0.33	0.33	0.309	0.304313	0.326	0.5962	0.2608	0.0522	0.3528	0.33	0.6	0.27	0.06	0.3236	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.103004	NA	NA	0.323488	0.093282	NA	0.254	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118452.2;CLNDSDB=.;CLNDSDBID=.	4.026912
1249	20	34319765	34319765	A	C	intronic	RBM39	NA	NA	NA	UTR3	ENSG00000131051	ENST00000426951:c.*97T>G	NA	NA	NA	NA	20q11.22	NA	NA	NA	NA	rs2425111	0.17	0.17	0.174	0.195687	0.1402	0.1319	0.1614	0.3321	0.1585	0.13	0.12	0.19	0.28	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.487707	NA	NA	NA	NA	NA	0.174	NA	4.0264667
1249	1	25890189	25890189	A	G	exonic	LDLRAP1	NA	synonymous SNV	LDLRAP1:NM_015627:exon7:c.A654G:p.T218T	exonic	ENSG00000157978	NA	synonymous SNV	ENSG00000157978:ENST00000374338:exon7:c.A654G:p.T218T	NA	NA	1p36.11	NA	NA	NA	NA	rs28969504	0.59	0.59	0.604	0.586262	0.5338	0.4435	0.5951	0.829	0.453	0.52	0.51	0.59	0.81	0.5515	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.166377	NA	NA	0.555116	0.782569	NA	0.42	NA	4.0262506
1249	2	187528635	187528635	A	G	intronic	ITGAV	NA	NA	NA	ncRNA_intronic	ENSG00000227227	NA	NA	NA	NA	NA	2q32.1	NA	NA	NA	NA	rs3816386	0.25	0.25	0.245	0.260583	0.3072	0.1716	0.2781	0.1989	0.3753	0.32	0.15	0.29	0.24	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.523469	NA	NA	NA	NA	ID=COSN166350;OCCURENCE=1(endometrium)	0.261	NA	4.0261333
1249	7	149509817	149509817	G	T	intronic	SSPO	NA	NA	NA	ncRNA_intronic	ENSG00000197558	NA	NA	NA	NA	NA	7q36.1	NA	NA	NA	NA	rs740111	0.45	0.45	0.443	0.498203	0.3072	0.4296	0.4049	0.8154	0.4029	0.29	0.43	0.41	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.362946	NA	NA	NA	NA	NA	0.486	NA	4.0261333
1249	22	41613303	41613303	C	T	intronic	L3MBTL2	NA	NA	NA	ncRNA_exonic	ENSG00000235513	NA	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs9611520	0.23	0.23	0.167	0.240216	0.3072	0.0526	0.4625	0.1112	0.3814	0.31	0.06	0.48	0.11	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.518297	NA	NA	NA	NA	NA	0.29	NA	4.0261333
1249	3	143574901	143574901	A	G	intergenic	SLC9A9,C3orf58	dist=7528;dist=115739	NA	NA	ncRNA_exonic	ENSG00000235110	NA	NA	NA	Score=720;Name=lod=1127	NA	3q24	NA	NA	NA	NA	rs6782974	0.97	0.97	0.97	0.970447	0.9742	1	0.9611	0.9289	0.999	0.98	1	0.95	0.94	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.119126	NA	1	NA	NA	NA	0.957	NA	4.0258
1249	1	160136350	160136350	G	A	exonic	ATP1A4	NA	synonymous SNV	ATP1A4:NM_144699:exon8:c.G1080A:p.A360A	exonic	ENSG00000132681	NA	synonymous SNV	ENSG00000132681:ENST00000368081:exon8:c.G1080A:p.A360A,ENSG00000132681:ENST00000477338:exon8:c.G1080A:p.A360A	NA	NA	1q23.2	NA	NA	NA	NA	rs7529215	0.47	0.47	0.423	0.468251	0.5457	0.4851	0.5375	0.2806	0.5757	0.54	0.48	0.53	0.29	0.5294	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.1681	NA	NA	0.56593	0.334771	NA	0.391	NA	4.0256366
1250	16	25239872	25239872	G	C	UTR3	AQP8	NM_001169:c.*59G>C	NA	NA	UTR3	ENSG00000103375	ENST00000566125:c.*59G>C,ENST00000219660:c.*59G>C	NA	NA	NA	NA	16p12.1	NA	NA	NA	NA	rs2287797	0.27	0.27	0.266	0.293331	0.1581	0.3899	0.2795	0.3411	0.2781	0.15	0.38	0.22	0.36	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.378736	NA	NA	0.150534	0.32948	NA	0.254	NA	4.0246994
1250	22	46748310	46748310	T	C	intronic	TRMU	NA	NA	NA	UTR3	ENSG00000100416	ENST00000424260:c.*299T>C	NA	NA	NA	NA	22q13.31	NA	NA	NA	NA	rs6008770	0.22	0.22	0.244	0.239018	0.1421	0.001	0.1167	0.6838	0.0695	0.14	NA	0.13	0.66	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.287266	NA	NA	NA	NA	NA	0.225	NA	4.0245667
1250	2	102792760	102792760	A	G	intronic	IL1R1	NA	NA	NA	ncRNA_UTR3	ENSG00000115594	NA	NA	NA	NA	NA	2q12.1	NA	NA	NA	NA	rs3917318	0.37	0.37	0.354	0.371406	0.3091	0.4802	0.4741	0.295	0.3538	0.32	0.49	0.41	0.3	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.700709	1.700709	NA	NA	NA	NA	0.275	NA	4.0242333
1250	14	94914340	94914340	G	T	intronic	SERPINA11	NA	NA	NA	ncRNA_intronic	ENSG00000256357	NA	NA	NA	NA	NA	14q32.13	NA	NA	NA	NA	rs11620887	0.33	0.33	0.306	0.320687	0.3091	0.4484	0.3919	0.1619	0.365	0.32	0.46	0.37	0.18	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.748046	NA	NA	NA	NA	NA	0.261	NA	4.0242333
1250	10	99205686	99205686	A	G	intronic	EXOSC1	NA	NA	NA	intronic	ENSG00000171311	NA	NA	NA	NA	NA	10q24.1	NA	Name=CTCF,CEBPB,GTF2F1_(RAP-74),CHD2_(N-1250),Max,Pol2,NRSF,SP1,YY1_(C-20),TAF7_(SQ-8),NF-YA,TAF1,USF2,TBP,IRF3,HEY1,NFKB,c-Myc,CTCF_(C-20),YY1,RFX5_(N-494),Pol2-4H8,HA-E2F1,Sin3Ak-20	NA	NA	rs2297666	0.29	0.29	0.244	0.242812	0.3529	0.3472	0.3401	0.0378	0.2301	0.36	0.37	0.37	0.04	0.3047	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.86642	NA	NA	0.318372	0.075125	NA	0.312	NA	4.024028
1250	1	35251229	35251229	G	A	UTR3	GJB3	NM_024009:c.*53G>A,NM_001005752:c.*53G>A	NA	NA	ncRNA_UTR3	ENSG00000188910	NA	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	rs476220	0.43	0.43	0.441	0.403954	0.4761	0.1716	0.389	0.6551	0.2403	0.48	0.19	0.43	0.63	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.752572	NA	NA	NA	NA	NA	0.399	NA	4.0239
1250	5	77080740	77080740	T	C	intergenic	TBCA,AP3B1	dist=8555;dist=217410	NA	NA	ncRNA_exonic	ENSG00000213763	NA	NA	NA	Score=867;Name=lod=4445	NA	5q14.1	NA	NA	NA	NA	rs254408	0.9	0.9	0.885	0.89377	0.9761	0.6766	0.9481	0.9667	0.8957	0.98	0.69	0.96	0.97	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.008741	NA	NA	NA	NA	NA	0.906	NA	4.0239
1250	5	77081608	77081608	T	C	intergenic	TBCA,AP3B1	dist=9423;dist=216542	NA	NA	ncRNA_exonic	ENSG00000213763	NA	NA	NA	Score=867;Name=lod=4445	NA	5q14.1	NA	NA	NA	NA	rs254401	0.89	0.89	0.891	0.892173	0.9761	0.6766	0.9481	0.9614	0.8947	0.98	0.69	0.96	0.96	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.212527	NA	NA	NA	NA	NA	0.848	NA	4.0239
1250	2	167140955	167140955	G	A	intronic	SCN9A	NA	NA	NA	ncRNA_intronic	ENSG00000236107	NA	NA	NA	NA	NA	2q24.3	NA	NA	NA	NA	rs7608201	0.12	0.12	0.109	0.115815	0.0805	0.0774	0.1873	0.1823	0.0511	0.07	0.08	0.17	0.2	0.1501	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.671419	NA	NA	0.078868	0.146937	NA	0.072	NA	4.0238653
1250	9	130941741	130941741	C	G	intronic	CIZ1	NA	NA	NA	intronic	ENSG00000148337	NA	NA	NA	NA	NA	9q34.11	NA	Name=KAP1	NA	NA	rs11788797	0.18	0.18	0.152	0.161741	0.3509	0.0129	0.2046	0.1006	0.1728	0.33	0.0035	0.22	0.12	0.2805	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.669017	1.669017	NA	0.344836	0.126991	NA	0.087	NA	4.023764
1250	17	21318629	21318629	C	A	UTR5	KCNJ12,KCNJ18	NM_021012:c.-26C>A;NM_001194958:c.-26C>A	NA	NA	UTR5	ENSG00000184185	ENST00000583088:c.-26C>A,ENST00000331718:c.-26C>A	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs58862472	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.3096	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.785091	NA	NA	NA	NA	NA	0.014	NA	4.0237334
1250	9	113166697	113166697	T	A	exonic	SVEP1	NA	synonymous SNV	SVEP1:NM_153366:exon39:c.A9576T:p.V3192V	exonic	ENSG00000165124	NA	synonymous SNV	ENSG00000165124:ENST00000297826:exon4:c.A3354T:p.V1118V,ENSG00000165124:ENST00000374469:exon39:c.A9507T:p.V3169V,ENSG00000165124:ENST00000401783:exon39:c.A9576T:p.V3192V	NA	NA	9q31.3	NA	NA	NA	NA	rs1410049	0.57	0.57	0.607	0.631989	0.5358	0.5188	0.4755	0.8434	0.6728	0.53	0.48	0.48	0.8	0.5613	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.444728	NA	NA	0.545841	0.776956	NA	0.522	NA	4.0237256
1250	19	43429796	43429796	G	A	intronic	PSG7	NA	NA	NA	UTR3	ENSG00000221878	ENST00000446844:c.*91C>T	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs57760445	0.11	0.11	0.091	0.107628	0.1431	0.003	0.2176	0.0885	0.1268	0.15	0.0017	0.21	0.12	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.971929	NA	NA	NA	NA	NA	0.167	NA	4.0235667
1250	19	13015530	13015530	A	G	intronic	SYCE2	NA	NA	NA	intronic	ENSG00000105607,ENSG00000161860	NA	NA	NA	Score=343;Name=lod=33	NA	19p13.2	NA	NA	NA	NA	rs17706531	0.25	0.25	0.21	0.252396	0.3111	0.1498	0.4337	0.1778	0.2699	0.3	0.14	0.41	0.16	0.3231	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.460512	NA	NA	0.342353	0.206241	NA	0.239	NA	4.023447
1250	5	482186	482186	C	G	exonic	SLC9A3	NA	synonymous SNV	SLC9A3:NM_004174:exon8:c.G1443C:p.G481G	exonic	ENSG00000066230	NA	synonymous SNV	ENSG00000066230:ENST00000264938:exon8:c.G1443C:p.G481G,ENSG00000066230:ENST00000514375:exon8:c.G1416C:p.G472G	Score=463;Name=lod=102	NA	5p15.33	NA	NA	NA	NA	rs9885312	0.8	0.8	0.777	0.8123	0.8847	0.5754	0.8026	0.9811	0.7607	0.88	0.53	0.82	0.98	0.8631	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.815061	NA	NA	0.895557	0.959982	NA	0.442	NA	4.0233096
1250	22	31323900	31323900	G	C	intronic	MORC2	NA	NA	NA	ncRNA_intronic	ENSG00000235989	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs5753394	0.45	0.45	0.453	0.453474	0.3101	0.6776	0.3429	0.553	0.3139	0.3	0.61	0.38	0.55	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.005796	NA	NA	NA	NA	NA	0.42	NA	4.0232333
1250	2	204305093	204305093	T	C	exonic	RAPH1	NA	synonymous SNV	RAPH1:NM_213589:exon14:c.A2820G:p.P940P	exonic	ENSG00000173166	NA	synonymous SNV	ENSG00000173166:ENST00000319170:exon14:c.A2820G:p.P940P,ENSG00000173166:ENST00000374493:exon15:c.A2976G:p.P992P	NA	NA	2q33.2	NA	NA	NA	NA	rs3814365	0.4	0.4	0.355	0.415335	0.5577	0.3909	0.4424	0.1513	0.6319	0.55	0.32	0.5	0.18	0.5144	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.643247	NA	NA	0.571628	0.220835	NA	0.399	NA	4.0229386
1250	1	199878777	199878777	G	A	intergenic	LOC100131234,NR5A2	dist=972219;dist=117953	NA	NA	downstream	ENSG00000229747	NA	NA	NA	NA	NA	1q32.1	NA	Name=MafK_(ab50322)	NA	NA	rs6693560	0.55	0.55	0.543	0.559505	0.4771	0.6448	0.5865	0.497	0.6217	0.49	0.66	0.54	0.51	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.500246	NA	NA	NA	NA	NA	0.601	NA	4.0229
1250	4	103789810	103789810	C	A	intronic	UBE2D3	NA	NA	NA	intronic	ENSG00000109332	NA	NA	NA	NA	NA	4q24	NA	Name=GATA-1,TAF1,TAL1_(SC-12984),Pol2,Pol2-4H8,E2F6,Sin3Ak-20,HA-E2F1,BCLAF1_(M33-P5B11),TBP	NA	NA	rs223333	0.55	0.55	0.543	0.561302	0.4881	0.502	0.5418	0.7224	0.4939	0.48	0.49	0.55	0.75	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.301475	NA	NA	0.489001	0.657514	NA	0.594	NA	4.022899
1250	4	74863997	74863997	T	C	exonic	CXCL5	NA	synonymous SNV	CXCL5:NM_002994:exon2:c.A168G:p.Q56Q	exonic	ENSG00000163735	NA	synonymous SNV	ENSG00000163735:ENST00000296027:exon2:c.A168G:p.Q56Q	NA	NA	4q13.3	NA	NA	Name=98	NA	rs425535	0.82	0.82	0.799	0.813099	0.8867	0.9643	0.8761	0.5287	0.9213	0.88	0.97	0.88	0.53	0.8694	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.117372	NA	NA	0.887907	0.601906	NA	0.732	NA	4.0226596
1250	6	41217087	41217087	C	T	upstream	TREML5P	NA	NA	NA	ncRNA_exonic	ENSG00000225690	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs2004196	0.19	0.19	0.17	0.182708	0.1441	0.3909	0.1772	0.0212	0.2301	0.15	0.4	0.15	0.04	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.383077	NA	NA	NA	NA	NA	0.145	NA	4.0225666
1250	3	39185248	39185248	A	G	exonic	CSRNP1	NA	synonymous SNV	CSRNP1:NM_033027:exon5:c.T1068C:p.S356S	exonic	ENSG00000144655	NA	synonymous SNV	ENSG00000144655:ENST00000273153:exon5:c.T1068C:p.S356S,ENSG00000144655:ENST00000514182:exon5:c.T1068C:p.S356S	NA	NA	3p22.2	NA	NA	Name=9	NA	rs784519	0.89	0.89	0.891	0.908946	0.8857	0.8948	0.9409	0.9334	0.8916	0.88	0.87	0.92	0.92	0.8847	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.627637	NA	NA	0.873721	0.932138	NA	0.928	NA	4.0225456
1250	6	29761726	29761726	C	T	intronic	LOC554223	NA	NA	NA	ncRNA_exonic	ENSG00000181126	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs1611219	0.36	0.36	0.372	0.384784	0.3111	0.1954	0.3703	0.5991	0.3763	0.31	0.24	0.36	0.57	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.960331	NA	NA	NA	NA	NA	0.399	NA	4.0222333
1250	19	12491498	12491498	C	T	intergenic	ZNF442,ZNF799	dist=15023;dist=9330	NA	NA	ncRNA_exonic	ENSG00000248406	NA	NA	NA	NA	NA	19p13.2	NA	Name=KAP1,SETDB1	NA	NA	rs4804664	0.49	0.49	0.518	0.4998	0.4791	0.2847	0.4986	0.7504	0.4049	0.49	0.29	0.5	0.73	0.4988	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00582	NA	NA	NA	NA	NA	0.572	NA	4.0221
1250	1	156354293	156354293	A	G	intronic	RHBG	NA	NA	NA	exonic	ENSG00000132677	NA	synonymous SNV	ENSG00000132677:ENST00000451864:exon8:c.A1089G:p.S363S	NA	NA	1q22	NA	NA	NA	NA	rs6668731	0.41	0.41	0.426	0.423123	0.2396	0.5446	0.2911	0.6074	0.3313	0.25	0.54	0.25	0.62	0.32	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.34419	1.34419	NA	0.251872	0.530675	NA	0.442	NA	4.0218613
1250	6	139183879	139183879	G	A	intronic	ECT2L	NA	NA	NA	intronic	ENSG00000203734	NA	NA	NA	NA	NA	6q24.1	NA	NA	Name=4	NA	rs12204850	0.25	0.25	0.226	0.218251	0.3509	0.1151	0.3948	0.1157	0.2014	0.35	0.14	0.38	0.12	0.3008	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.23703	NA	NA	0.326487	0.141654	ID=COSN167897;OCCURENCE=1(large_intestine)	0.246	NA	4.021813
1250	14	106236000	106236000	T	C	intergenic	ELK2AP,KIAA0125	dist=96856;dist=147838	NA	NA	exonic	ENSG00000211897	NA	unknown	UNKNOWN	NA	NA	14q32.33	NA	NA	NA	NA	rs141959627	0.02	0.02	0.013	0.0233626	0.0616	NA	0.0317	0.003	0.0297	0.04	0.0017	0.02	0.002	0.0366	0.047	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.904517	NA	1	0.047136	0.006559	NA	0.014	NA	4.0213307
1250	2	132240509	132240509	C	A	ncRNA_intronic	RNU6-81P	NA	NA	NA	intronic	ENSG00000173272	NA	NA	NA	NA	NA	2q21.1	NA	NA	NA	NA	rs3817560	0.54	0.54	0.542	0.574681	0.3121	0.7649	0.6282	0.7277	0.4039	0.29	0.71	0.56	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.818008	NA	NA	NA	NA	NA	0.529	NA	4.0212333
1250	3	39376485	39376485	T	C	intergenic	CCR8,SLC25A38	dist=1314;dist=48330	NA	NA	ncRNA_exonic	ENSG00000228168	NA	NA	NA	Score=726;Name=lod=1188	NA	3p22.2	NA	NA	NA	NA	rs2649756	0.95	0.95	0.944	0.949281	0.9791	0.9643	0.9625	0.8729	0.9969	0.98	0.97	0.97	0.88	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.316525	NA	NA	NA	NA	NA	0.935	NA	4.0209
1250	3	39400941	39400941	T	C	intergenic	CCR8,SLC25A38	dist=25770;dist=23874	NA	NA	ncRNA_exonic	ENSG00000223668	NA	NA	NA	Score=860;Name=lod=4149	NA	3p22.1	NA	NA	NA	NA	rs6806563	0.94	0.94	0.95	0.949281	0.9791	0.9643	0.9625	0.8729	0.9969	0.96	0.96	0.95	0.87	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.484272	2.484272	NA	NA	NA	NA	0.928	NA	4.0209
1250	7	136849114	136849114	A	T	upstream	LOC349160	NA	NA	NA	ncRNA_exonic	ENSG00000224469	NA	NA	NA	NA	NA	7q33	NA	NA	NA	NA	rs66709830	0.14	0.14	0.152	0.135783	0.1461	0.0437	0.0793	0.2761	0.0706	0.14	0.04	0.09	0.27	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.468355	NA	NA	NA	NA	NA	0.123	NA	4.0205666
1250	10	122892699	122892699	G	A	intergenic	MIR5694,FGFR2	dist=85841;dist=345145	NA	NA	ncRNA_exonic	ENSG00000236762	NA	NA	NA	Score=713;Name=lod=1049	NA	10q26.12	NA	NA	NA	NA	rs1907237	0.81	0.81	0.74	0.804513	0.9801	0.7758	0.8991	0.5257	0.9632	0.98	0.78	0.9	0.53	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.396369	NA	NA	NA	NA	NA	0.833	NA	4.0199
1250	12	51128832	51128832	A	G	intronic	DIP2B	NA	NA	NA	intronic	ENSG00000066084	NA	NA	NA	NA	NA	12q13.12	NA	Name=CTCF	NA	NA	rs3742062	0.32	0.32	0.322	0.316693	0.33	0.256	0.2752	0.326	0.3824	0.32	0.31	0.27	0.35	0.3099	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.417437	NA	NA	0.340349	0.317975	NA	0.297	NA	4.019751
1250	6	7341836	7341836	C	T	intronic	CAGE1	NA	NA	NA	ncRNA_exonic	ENSG00000230570	NA	NA	NA	NA	NA	6p24.3	NA	NA	NA	NA	rs879294	0.41	0.41	0.456	0.428714	0.3141	0.2431	0.2882	0.8442	0.2761	0.32	0.22	0.3	0.83	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.160413	NA	NA	NA	NA	NA	0.391	NA	4.0192333
1250	6	31379620	31379620	G	A	intronic	MICA	NA	NA	NA	ncRNA_intronic	ENSG00000206337	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs3828882	0.37	0.37	0.333	0.364617	0.3141	0.3006	0.4078	0.4781	0.2986	0.32	0.28	0.46	0.46	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.834883	NA	NA	NA	NA	NA	0.341	NA	4.0192333
1250	6	31382690	31382690	A	G	intronic	MICA	NA	NA	NA	ncRNA_intronic	ENSG00000206337	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs9266823	0.36	0.36	0.308	0.358227	0.3141	0.3006	0.4049	0.4554	0.2986	0.32	0.28	0.46	0.46	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.614774	NA	NA	NA	NA	NA	0.29	NA	4.0192333
1250	19	21719401	21719401	T	C	exonic	ZNF429	NA	synonymous SNV	ZNF429:NM_001001415:exon4:c.T546C:p.F182F	exonic	ENSG00000197013	NA	synonymous SNV	ENSG00000197013:ENST00000358491:exon4:c.T546C:p.F182F	NA	NA	19p12	NA	NA	NA	NA	rs35782355	0.56	0.56	0.532	0.557708	0.5388	0.6389	0.5288	0.4781	0.6217	0.54	0.66	0.55	0.48	0.5514	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.24889	NA	NA	0.55792	0.466955	NA	0.471	NA	4.0185466
1250	21	47544541	47544541	C	G	intronic	COL6A2	NA	NA	NA	intronic	ENSG00000142173	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs3746995	0.44	0.44	0.404	NA	NA	NA	NA	NA	NA	0.53	0.41	0.62	0.22	0.4797	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.305283	1.305283	NA	0.501861	0.242507	NA	0.355	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000079855.1;CLNDSDB=.;CLNDSDBID=.	4.018439
1250	3	97888197	97888197	C	T	exonic	OR5H15	NA	synonymous SNV	OR5H15:NM_001005515:exon1:c.C654T:p.Y218Y	exonic	ENSG00000233412	NA	synonymous SNV	ENSG00000233412:ENST00000356526:exon1:c.C654T:p.Y218Y	NA	NA	3q11.2	NA	NA	NA	NA	rs7623031	0.62	0.62	0.624	0.626597	0.5368	0.5079	0.5807	0.8525	0.5685	0.54	0.56	0.53	0.85	0.5702	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.905891	NA	NA	0.541512	0.804131	NA	0.565	NA	4.0181546
1250	12	118199286	118199286	C	G	exonic	KSR2	NA	synonymous SNV	KSR2:NM_173598:exon4:c.G429C:p.T143T	exonic	ENSG00000171435	NA	synonymous SNV	ENSG00000171435:ENST00000339824:exon4:c.G516C:p.T172T,ENSG00000171435:ENST00000425217:exon4:c.G429C:p.T143T	Score=578;Name=lod=297	NA	12q24.23	NA	NA	NA	NA	rs617641	0.92	0.92	0.924	0.942093	0.8807	0.9474	0.9251	0.9939	0.9417	0.87	0.94	0.93	0.99	0.8985	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.093507	NA	NA	0.869424	0.974378	NA	0.891	NA	4.0180426
1250	2	107423128	107423128	C	T	UTR3	ST6GAL2	NM_001142351:c.*6G>A,NM_032528:c.*6G>A	NA	NA	UTR3	ENSG00000144057	ENST00000361686:c.*6G>A,ENST00000409382:c.*6G>A,ENST00000361803:c.*6G>A	NA	NA	NA	NA	2q12.2	NA	NA	NA	NA	rs3796114	0.08	0.08	0.075	0.0670927	0.1024	0.0645	0.1326	0.0272	0.0409	0.11	0.08	0.11	0.03	0.0947	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.150906	NA	NA	0.118605	0.041761	NA	0.123	NA	4.0176284
1250	8	43047593	43047593	G	A	intronic	HGSNAT	NA	NA	NA	intronic	ENSG00000165102	NA	NA	NA	NA	NA	8p11.21	NA	NA	NA	NA	rs17603428	0.23	0.23	0.219	0.22524	0.341	0.2361	0.2392	0.0091	0.3773	0.32	0.28	0.26	0.01	0.3072	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.857817	NA	NA	0.335183	0.065675	NA	0.167	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000082653.1;CLNDSDB=.;CLNDSDBID=.	4.016617
1250	5	154065495	154065495	G	A	intergenic	MIR3141,LARP1	dist=89863;dist=26967	NA	NA	downstream	ENSG00000221552	NA	NA	NA	NA	NA	5q33.2	NA	NA	Name=4	NA	rs11958012	0.25	0.25	0.2	0.224641	0.4841	NA	0.2709	0.1362	0.2761	0.48	0.0017	0.32	0.14	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.102157	NA	NA	NA	NA	NA	NA	NA	4.0159
1250	19	55032864	55032864	C	T	intergenic	LAIR2,KIR3DX1	dist=10964;dist=11045	NA	NA	upstream	ENSG00000213016	NA	NA	NA	NA	NA	19q13.42	NA	NA	Name=32	NA	rs62131578	0.38	0.38	0.341	0.357428	0.4841	0.4563	0.3026	0.1543	0.4387	0.47	0.46	0.36	0.15	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.085412	NA	NA	NA	NA	NA	0.384	NA	4.0159
1250	19	43382522	43382522	C	T	intronic	PSG1	NA	NA	NA	UTR5	ENSG00000231924	ENST00000595930:c.-241G>A	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs113461092	0.1	0.1	0.039	0.0992412	0.1511	0.003	0.2161	0.053	0.1247	0.15	0.0017	0.19	0.08	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.84378	NA	NA	NA	NA	NA	0.101	NA	4.0155667
1250	17	30377162	30377162	A	G	intronic	LRRC37B	NA	NA	NA	exonic	ENSG00000185158	NA	unknown	UNKNOWN	NA	NA	17q11.2	NA	NA	NA	NA	rs16967101	0.18	0.18	0.19	0.192692	0.1531	0.0397	0.1167	0.4017	0.1626	0.16	0.05	0.12	0.42	0.1849	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.535883	NA	NA	0.146606	0.343522	NA	0.261	NA	4.015394
1250	15	90172600	90172600	G	A	intronic	KIF7	NA	NA	NA	intronic	ENSG00000140534,ENSG00000166813	NA	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs74251725	0.27	0.27	0.245	0.27516	0.331	0.3958	0.2839	0.0802	0.3507	0.34	0.35	0.25	0.08	0.3199	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.449527	NA	NA	0.333799	0.111136	NA	0.196	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117423.2;CLNDSDB=.;CLNDSDBID=.	4.015301
1250	17	34398495	34398495	C	T	UTR3	CCL18	NM_002988:c.*94C>T	NA	NA	UTR3	ENSG00000006074	ENST00000004921:c.*94C>T	NA	NA	NA	NA	17q12	NA	NA	NA	NA	rs14304	0.23	0.23	0.203	0.204273	0.3181	0.3294	0.1902	0.0242	0.2117	0.32	0.33	0.18	0.02	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.186196	NA	NA	NA	NA	NA	0.246	NA	4.0152334
1250	11	100208156	100208156	C	G	intronic	CNTN5	NA	NA	NA	ncRNA_exonic	ENSG00000255547	NA	NA	NA	NA	NA	11q22.1	NA	NA	NA	NA	rs1944174	0.21	0.21	0.212	0.202077	0.3181	0.0556	0.1715	0.2776	0.1534	0.31	0.03	0.2	0.27	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.599114	NA	NA	NA	NA	NA	0.188	NA	4.0152333
1250	19	19381755	19381755	C	T	intronic	TM6SF2	NA	NA	NA	ncRNA_intronic	ENSG00000267629	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs2074303	0.42	0.42	0.414	0.467053	0.3181	0.3264	0.4553	0.6536	0.5215	0.31	0.33	0.44	0.67	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.528465	NA	NA	NA	NA	NA	0.493	NA	4.0152333
1251	11	24759855	24759855	G	A	intronic	LUZP2	NA	NA	NA	intronic	ENSG00000187398	NA	NA	NA	Score=606;Name=lod=386	NA	11p14.3	NA	NA	NA	NA	rs1564992	0.35	0.35	0.302	0.344249	0.3191	0.5774	0.379	0.1082	0.4243	0.33	0.57	0.35	0.11	0.3533	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.663779	1.663779	NA	0.312674	0.14503	NA	0.21	NA	4.014926
1251	13	75813267	75813267	A	G	ncRNA_exonic	CTAGE11P	NA	NA	NA	ncRNA_exonic	ENSG00000214249	NA	NA	NA	NA	NA	13q22.2	NA	NA	NA	NA	rs484946	0.74	0.74	0.713	0.758586	0.6521	0.9494	0.7406	0.6089	0.8865	0.67	0.95	0.72	0.63	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.529464	NA	NA	NA	NA	NA	0.609	NA	4.0145666
1251	7	142099438	142099438	A	G	intergenic	LOC730441,MTRNR2L6	dist=127370;dist=274693	NA	NA	downstream	ENSG00000229200	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	NA	NA	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4856	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.382191	NA	NA	NA	NA	NA	NA	NA	4.0144
1251	9	98112208	98112208	G	C	intergenic	FANCC,PTCH1	dist=32217;dist=93056	NA	NA	intergenic	ENSG00000158169,ENSG00000271384	dist=32224;dist=57064	NA	NA	NA	NA	9q22.32	NA	NA	Name=4	NA	rs4744458	0.17	0.17	0.161	0.142372	0.3191	0.0288	0.2089	0.0779	0.1176	0.32	0.02	0.23	0.08	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.784588	NA	NA	NA	NA	NA	0.101	NA	4.0142334
1251	13	111973098	111973098	T	C	UTR5	TEX29	NM_152324:c.-140T>C	NA	NA	UTR5	ENSG00000153495	ENST00000283547:c.-140T>C	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs12855715	0.46	0.46	0.394	0.435703	0.3191	0.8006	0.451	0.3306	0.3108	0.3	0.77	0.44	0.35	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.102847	NA	NA	NA	NA	NA	0.239	NA	4.0142334
1251	1	12062205	12062205	A	G	intronic	MFN2	NA	NA	NA	intronic	ENSG00000116688	NA	NA	NA	NA	NA	1p36.22	NA	Name=AP-2gamma	Name=31	NA	rs2236057	0.64	0.64	0.635	0.657947	0.673	0.6845	0.5648	0.6324	0.7157	0.68	0.63	0.57	0.65	0.6615	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.506961	NA	NA	0.651395	0.64798	NA	0.572	NA	4.014105
1251	5	145643048	145643048	G	A	intronic	RBM27	NA	NA	NA	intronic	ENSG00000091009	NA	NA	NA	NA	NA	5q32	Score=813;Name=V$BRN2_01	NA	NA	NA	rs7729098	0.34	0.34	0.342	0.341454	0.3042	0.2113	0.4308	0.5182	0.2117	0.31	0.22	0.37	0.49	0.3442	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.399765	NA	NA	0.337521	0.485332	NA	0.449	NA	4.014079
1251	12	117217141	117217141	T	C	exonic	RNFT2	NA	synonymous SNV	RNFT2:NM_001109903:exon7:c.T870C:p.A290A,RNFT2:NM_032814:exon7:c.T870C:p.A290A	exonic	ENSG00000135119	NA	synonymous SNV	ENSG00000135119:ENST00000257575:exon7:c.T870C:p.A290A,ENSG00000135119:ENST00000392549:exon7:c.T870C:p.A290A,ENSG00000135119:ENST00000407967:exon7:c.T870C:p.A290A	NA	NA	12q24.22	Score=790;Name=V$PPARG_03	NA	NA	NA	rs4767452	0.89	0.89	0.884	0.871605	0.8827	0.9534	0.9193	0.789	0.8538	0.88	0.95	0.92	0.79	0.8834	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.916872	NA	NA	0.886628	0.797095	NA	0.891	NA	4.0139386
1251	12	9463077	9463077	A	C	ncRNA_intronic	LOC642846	NA	NA	NA	ncRNA_intronic	ENSG00000111788	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs10771513	0.47	0.47	0.429	0.674521	0.6531	0.4048	0.6787	0.7829	0.8252	0.53	0.3	0.53	0.52	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.26847	NA	NA	NA	NA	NA	0.094	NA	4.0135666
1251	6	56470690	56470690	G	A	ncRNA_intronic	RNU6-71P	NA	NA	NA	exonic	ENSG00000151914	NA	synonymous SNV	ENSG00000151914:ENST00000439203:exon26:c.C7125T:p.N2375N,ENSG00000151914:ENST00000446842:exon26:c.C7125T:p.N2375N,ENSG00000151914:ENST00000312431:exon36:c.C8103T:p.N2701N,ENSG00000151914:ENST00000361203:exon36:c.C8103T:p.N2701N,ENSG00000151914:ENST00000370769:exon36:c.C8103T:p.N2701N,ENSG00000151914:ENST00000370754:exon39:c.C8637T:p.N2879N	NA	NA	6p12.1	NA	NA	NA	NA	rs13209548	0.37	0.37	0.371	0.355032	0.3807	0.2431	0.3775	0.4985	0.2342	0.36	0.24	0.4	0.52	0.3629	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.97993	NA	NA	0.40967	0.485598	NA	0.442	NA	4.0133966
1251	14	81448511	81448511	G	A	intronic	TSHR	NA	NA	NA	ncRNA_exonic	ENSG00000258915	NA	NA	NA	NA	NA	14q31.1	NA	NA	NA	NA	rs4903957	0.25	0.25	0.222	0.246006	0.3211	0.1815	0.3588	0.0605	0.4059	0.33	0.21	0.36	0.08	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.506354	NA	NA	NA	NA	NA	0.304	NA	4.0122333
1251	3	22423244	22423244	C	T	intergenic	ZNF385D,UBE2E2	dist=630428;dist=821540	NA	NA	upstream	ENSG00000132967	NA	NA	NA	Score=797;Name=lod=2312	NA	3p24.3	NA	NA	NA	NA	rs4597736	0.45	0.45	0.385	0.457867	0.4881	0.4385	0.6254	0.2761	0.5736	0.49	0.48	0.58	0.24	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.040056	NA	NA	NA	NA	NA	0.377	NA	4.0119
1251	19	44565125	44565125	A	G	intronic	ZNF223	NA	NA	NA	intronic	ENSG00000178386,ENSG00000267022	NA	NA	NA	NA	NA	19q13.31	NA	NA	Name=2	NA	rs4502339	0.99	0.99	0.998	0.995607	0.9881	1	0.987	0.9992	1	0.99	1	0.99	1	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.261763	NA	NA	NA	NA	NA	1	NA	4.0119
1251	11	71506121	71506121	T	G	ncRNA_exonic	ALG1L9P	NA	NA	NA	ncRNA_exonic	ENSG00000248671	NA	NA	NA	NA	NA	11q13.4	NA	NA	NA	NA	rs12801684	0.57	0.57	0.568	0.600639	0.6551	0.4415	0.464	0.6551	0.7321	0.65	0.43	0.51	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.155805	NA	NA	NA	NA	NA	0.551	NA	4.0115666
1251	2	230663576	230663576	C	T	intronic	TRIP12	NA	NA	NA	intronic	ENSG00000153827	NA	NA	NA	NA	NA	2q36.3	NA	NA	Name=9	NA	rs6720868	0.33	0.33	0.337	0.336262	0.3449	0.252	0.2767	0.4523	0.2996	0.36	0.22	0.3	0.44	0.3183	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.698742	NA	NA	0.326163	0.46414	NA	0.413	NA	4.010637
1251	12	6573856	6573856	G	T	UTR3	VAMP1	NM_199245:c.*186C>A	NA	NA	UTR3	ENSG00000139190	ENST00000361716:c.*186C>A	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs1034969	0.28	0.28	0.277	0.272564	0.3231	0.3284	0.1844	0.2141	0.3047	0.31	0.33	0.2	0.22	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.864607	NA	NA	NA	NA	NA	0.232	NA	4.0102334
1251	6	119344020	119344020	C	T	intronic	FAM184A	NA	NA	NA	ncRNA_intronic	ENSG00000253194	NA	NA	NA	NA	NA	6q22.31	NA	NA	NA	NA	rs9481880	0.18	0.18	0.17	0.192492	0.3231	0.0714	0.2478	0.0651	0.316	0.32	0.05	0.27	0.06	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.731387	NA	NA	NA	NA	NA	0.246	NA	4.0102333
1251	8	22571113	22571113	G	A	intronic	PEBP4	NA	NA	NA	ncRNA_intronic	ENSG00000253125	NA	NA	NA	NA	NA	8p21.3	NA	NA	NA	NA	rs2280106	0.32	0.32	0.279	0.28734	0.3231	0.2996	0.4582	0.2428	0.1769	0.32	0.29	0.43	0.26	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.324179	NA	NA	NA	NA	NA	0.268	NA	4.0102333
1251	10	100013244	100013244	A	C	intronic	LOXL4	NA	NA	NA	ncRNA_intronic	ENSG00000230928	NA	NA	NA	NA	NA	10q24.2	NA	NA	NA	NA	rs3750599	0.33	0.33	0.308	0.322484	0.3231	0.4732	0.33	0.2073	0.317	0.32	0.48	0.33	0.17	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.528203	NA	NA	NA	NA	NA	0.319	NA	4.0102333
1251	11	78128775	78128775	C	T	UTR5	GAB2	NM_080491:c.-9G>A	NA	NA	ncRNA_UTR5	ENSG00000033327	NA	NA	NA	NA	NA	11q14.1	NA	NA	NA	NA	rs11237488	0.22	0.22	0.14	0.199281	0.1561	0.4067	0.3055	0.0136	0.2055	0.18	0.4	0.25	0.04	0.2273	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.458054	1.458054	NA	0.106717	0.025227	NA	NA	NA	4.009883
1251	2	127453664	127453664	A	C	exonic	GYPC	NA	synonymous SNV	GYPC:NM_016815:exon3:c.A276C:p.G92G,GYPC:NM_002101:exon4:c.A333C:p.G111G,GYPC:NM_001256584:exon5:c.A270C:p.G90G	exonic	ENSG00000136732	NA	synonymous SNV	ENSG00000136732:ENST00000409836:exon3:c.A276C:p.G92G,ENSG00000136732:ENST00000259254:exon4:c.A333C:p.G111G,ENSG00000136732:ENST00000356887:exon4:c.A270C:p.G90G	NA	NA	2q14.3	NA	NA	NA	NA	rs1050967	0.6	0.6	0.659	0.615016	0.5497	0.6806	0.572	0.7474	0.4663	0.53	0.67	0.54	0.69	0.5554	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.293255	NA	NA	0.552093	0.691103	NA	0.667	NA	4.0094736
1251	3	186435583	186435583	T	C	intronic	KNG1	NA	NA	NA	ncRNA_intronic	ENSG00000197099	NA	NA	NA	NA	NA	3q27.3	NA	NA	NA	NA	rs13095338	0.35	0.35	0.329	0.390176	0.3241	0.3393	0.3098	0.4728	0.456	0.33	0.3	0.33	0.46	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.37712	NA	NA	NA	NA	NA	0.072	NA	4.0092333
1251	15	25417676	25417676	C	T	upstream	SNORD115-2	NA	NA	NA	ncRNA_exonic	ENSG00000224078	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs2739839	0.14	0.14	0.105	0.120008	0.1581	0.1825	0.2061	0.0068	0.1084	0.15	0.17	0.24	0.01	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.415726	NA	NA	NA	NA	NA	0.181	NA	4.0085666
1251	8	103572992	103572992	C	G	exonic	ODF1	NA	synonymous SNV	ODF1:NM_024410:exon2:c.C633G:p.P211P	exonic	ENSG00000155087	NA	synonymous SNV	ENSG00000155087:ENST00000285402:exon2:c.C633G:p.P211P,ENSG00000155087:ENST00000518835:exon2:c.C12G:p.P4P	Score=333;Name=lod=30	NA	8q22.3	NA	NA	NA	NA	rs3018444	0.77	0.77	0.732	0.786342	0.9046	0.6399	0.9063	0.6558	0.907	0.91	0.66	0.9	0.61	0.8603	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.308799	NA	NA	0.893256	0.677712	NA	0.746	NA	4.0085106
1251	8	72935008	72935008	C	T	ncRNA_UTR3	TRPA1	NA	NA	NA	UTR3	ENSG00000104321	ENST00000262209:c.*133G>A	NA	NA	NA	NA	8q13.3	NA	NA	NA	NA	rs10085956	0.56	0.56	0.548	0.513578	0.492	0.7589	0.3862	0.4871	0.409	0.52	0.79	0.41	0.47	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.054297	NA	NA	NA	NA	NA	0.478	NA	4.008
1251	8	72935039	72935039	C	T	ncRNA_UTR3	TRPA1	NA	NA	NA	UTR3	ENSG00000104321	ENST00000262209:c.*102G>A	NA	NA	NA	NA	8q13.3	NA	NA	NA	NA	rs10085964	0.56	0.56	0.56	0.513578	0.492	0.7589	0.3862	0.4871	0.409	0.52	0.79	0.41	0.47	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.813478	NA	NA	NA	NA	NA	0.493	NA	4.008
1251	6	57472316	57472316	G	A	intronic	PRIM2	NA	NA	NA	intronic	ENSG00000146143	NA	NA	NA	Score=383;Name=lod=48	NA	6p11.2	NA	NA	NA	NA	rs9382818	NA	NA	NA	0.496805	0.494	0.4931	0.4971	0.4992	0.5	NA	NA	NA	NA	0.4981	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.104011	4.104011	NA	NA	NA	NA	NA	NA	4.0079
1251	6	32523206	32523206	G	A	ncRNA_intronic	HLA-DRB6	NA	NA	NA	ncRNA_intronic	ENSG00000229391	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs75999763	NA	NA	NA	0.682308	0.659	0.6885	0.7176	0.7352	0.6033	NA	NA	NA	NA	NA	0.098	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.873052	NA	NA	NA	NA	NA	0.109	NA	4.0076666
1251	19	39408360	39408360	A	G	intronic	SARS2	NA	NA	NA	intronic	ENSG00000104835,ENSG00000269547	NA	NA	NA	NA	NA	19q13.2	Score=940;Name=V$ELK1_01	NA	Name=4	NA	rs7508411	0.81	0.81	0.814	0.834665	0.666	0.9742	0.8314	0.9206	0.7505	0.65	0.98	0.78	0.9	0.7066	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.185696	NA	NA	0.619767	0.871993	NA	0.797	NA	4.007633
1251	1	18809916	18809916	G	A	UTR3	KLHDC7A	NM_152375:c.*107G>A	NA	NA	UTR3	ENSG00000179023	ENST00000400664:c.*107G>A	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs12061708	0.23	0.23	0.242	0.201677	0.326	0.1488	0.2507	0.1725	0.1329	0.35	0.14	0.21	0.18	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.742843	NA	NA	NA	NA	NA	0.167	NA	4.0073334
1251	2	113089267	113089267	T	C	exonic	ZC3H6	NA	synonymous SNV	ZC3H6:NM_198581:exon12:c.T2772C:p.N924N	exonic	ENSG00000188177	NA	synonymous SNV	ENSG00000188177:ENST00000343936:exon12:c.T2772C:p.N924N,ENSG00000188177:ENST00000409871:exon12:c.T2772C:p.N924N	NA	NA	2q13	NA	NA	NA	NA	rs7601200	0.71	0.71	0.711	0.725639	0.5477	0.7421	0.6455	0.9728	0.6145	0.55	0.78	0.59	0.98	0.5962	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.236064	NA	NA	0.515732	0.901992	NA	0.703	NA	4.0070346
1251	22	41569887	41569887	G	A	intronic	EP300	NA	NA	NA	ncRNA_intronic	ENSG00000232754	NA	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs2076580	0.29	0.29	0.206	0.26238	0.327	0.4613	0.2147	0.0431	0.3211	0.31	0.49	0.23	0.05	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.124058	NA	NA	NA	NA	NA	0.217	NA	4.0063333
1251	14	106791201	106791201	C	G	intergenic	LINC00226,LINC00221	dist=46235;dist=147254	NA	NA	exonic	ENSG00000211953	NA	nonsynonymous SNV	ENSG00000211953:ENST00000390613:exon2:c.G155C:p.G52A	NA	NA	14q32.33	NA	NA	NA	NA	rs8016991	NA	NA	NA	0.484625	0.3708	0.5486	0.3905	0.5681	0.4898	NA	NA	NA	NA	0.4568	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.305095	NA	1	NA	NA	NA	NA	NA	4.0057334
1251	15	22566750	22566750	A	C	ncRNA_intronic	REREP3	NA	NA	NA	upstream	ENSG00000258732	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs7403787	NA	NA	0.107	0.135982	0.161	0.123	0.0764	0.1906	0.092	NA	NA	NA	NA	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.411213	1.411213	NA	NA	NA	NA	0.196	NA	4.0056666
1251	14	106209119	106209119	T	C	intergenic	ELK2AP,KIAA0125	dist=69975;dist=174719	NA	NA	exonic	ENSG00000211896	NA	nonsynonymous SNV	ENSG00000211896:ENST00000390542:exon1:c.A290G:p.K97R,ENSG00000211896:ENST00000390548:exon1:c.A290G:p.K97R,ENSG00000211896:ENST00000390549:exon1:c.A290G:p.K97R	NA	NA	14q32.33	Score=876;Name=V$EVI1_02	NA	NA	NA	rs1071803	NA	NA	0.26	0.397364	0.6481	0.5744	0.3876	0.028	0.4632	NA	NA	NA	NA	0.5641	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.040003	NA	0.03	0.615568	0.091891	NA	0.319	NA	4.0055654
1251	6	57472315	57472315	A	G	intronic	PRIM2	NA	NA	NA	intronic	ENSG00000146143	NA	NA	NA	Score=383;Name=lod=48	NA	6p11.2	NA	NA	NA	NA	rs9296901	NA	NA	NA	0.496805	0.494	0.4931	0.4971	0.4992	0.5	NA	NA	NA	NA	0.5005	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.516607	3.516607	NA	NA	NA	NA	0.022	NA	4.0055
1252	12	51138687	51138687	A	C	UTR3	DIP2B	NM_173602:c.*65A>C	NA	NA	UTR3	ENSG00000066084	ENST00000301180:c.*65A>C,ENST00000546732:c.*3130A>C	NA	NA	NA	NA	12q13.12	NA	NA	NA	NA	rs2280503	0.32	0.32	0.315	0.317093	0.329	0.256	0.2752	0.329	0.3814	0.32	0.31	0.27	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.877237	NA	NA	NA	NA	NA	0.297	NA	4.0043334
1252	5	145483679	145483679	T	C	intronic	PLAC8L1	NA	NA	NA	ncRNA_intronic	ENSG00000251556	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs12188066	0.29	0.29	0.274	0.287141	0.329	0.1984	0.4452	0.2814	0.2311	0.33	0.2	0.37	0.27	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.634726	NA	NA	NA	NA	NA	0.37	NA	4.0043333
1252	16	28844284	28844284	A	G	intronic	ATXN2L	NA	NA	NA	ncRNA_intronic	ENSG00000260570	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs62036626	0.27	0.27	0.238	0.261382	0.329	0.126	0.487	0.2277	0.2168	0.34	0.13	0.41	0.21	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.440104	NA	NA	NA	NA	ID=COSN165166;OCCURENCE=1(breast)	0.159	NA	4.0043333
1252	16	28847149	28847149	G	C	intronic	ATXN2L	NA	NA	NA	ncRNA_intronic	ENSG00000260570	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs55830740	0.27	0.27	0.231	0.261382	0.329	0.126	0.487	0.2277	0.2168	0.34	0.13	0.41	0.21	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-3.564168	NA	NA	NA	NA	NA	0.159	NA	4.0043333
1252	17	35414006	35414006	C	T	UTR3	AATF	NM_012138:c.*42C>T	NA	NA	UTR3	ENSG00000108270	ENST00000225402:c.*42C>T,ENST00000593084:c.*42C>T	NA	NA	NA	NA	17q12	NA	NA	NA	NA	rs11653434	0.05	0.05	0.055	0.0377396	0.1223	NA	0.0461	0.003	0.0307	0.13	NA	0.06	0.002	0.0868	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.110631	NA	NA	0.120349	0.024285	NA	0.116	NA	4.0038844
1252	1	238045995	238045995	T	C	ncRNA_intronic	LOC100130331	NA	NA	NA	ncRNA_intronic	ENSG00000237250	NA	NA	NA	NA	NA	1q43	NA	NA	NA	NA	rs2275694	0.3	0.3	0.31	0.300919	0.2107	0.4276	0.1916	0.3707	0.2464	0.2	0.42	0.21	0.37	0.2335	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.32647	NA	NA	0.218837	0.341126	NA	0.297	NA	4.0036296
1252	17	39081546	39081546	A	G	intronic	KRT23	NA	NA	NA	ncRNA_intronic	ENSG00000234477	NA	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs2269860	0.44	0.44	0.412	0.449081	0.33	0.5903	0.464	0.4508	0.4131	0.33	0.6	0.43	0.43	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.198216	NA	NA	NA	NA	NA	0.478	NA	4.0033333
1252	10	71868763	71868763	G	A	intronic	H2AFY2	NA	NA	NA	intronic	ENSG00000042286,ENSG00000099284	NA	NA	NA	NA	NA	10q22.1	Score=775;Name=V$MEF2_01	Name=GATA-2	NA	NA	rs2271698	0.47	0.47	0.443	0.419728	0.6988	0.3681	0.4971	0.1415	0.5072	0.72	0.37	0.53	0.15	0.5932	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.675067	NA	NA	0.704767	0.230595	NA	0.507	NA	4.003233
1252	4	39302029	39302029	T	C	exonic	RFC1	NA	synonymous SNV	RFC1:NM_001204747:exon20:c.A2544G:p.P848P,RFC1:NM_002913:exon20:c.A2541G:p.P847P	exonic	ENSG00000035928	NA	synonymous SNV	ENSG00000035928:ENST00000349703:exon20:c.A2541G:p.P847P,ENSG00000035928:ENST00000381897:exon20:c.A2544G:p.P848P	NA	NA	4p14	NA	NA	NA	NA	rs2066786	0.49	0.49	0.438	0.465256	0.5477	0.63	0.6066	0.0552	0.6646	0.56	0.66	0.62	0.07	0.5511	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.052252	NA	NA	0.565116	0.150704	NA	0.413	NA	4.0027506
1252	5	179260153	179260153	C	T	exonic	SQSTM1	NA	synonymous SNV	SQSTM1:NM_003900:exon6:c.C876T:p.D292D,SQSTM1:NM_001142298:exon7:c.C624T:p.D208D,SQSTM1:NM_001142299:exon7:c.C624T:p.D208D	exonic	ENSG00000161011	NA	synonymous SNV	ENSG00000161011:ENST00000360718:exon5:c.C624T:p.D208D,ENSG00000161011:ENST00000389805:exon6:c.C876T:p.D292D,ENSG00000161011:ENST00000402874:exon6:c.C624T:p.D208D,ENSG00000161011:ENST00000510187:exon6:c.C876T:p.D292D,ENSG00000161011:ENST00000376929:exon7:c.C624T:p.D208D	NA	NA	5q35.3	NA	NA	NA	NA	rs4935	0.68	0.68	0.658	0.69369	0.5099	0.8442	0.7349	0.7284	0.6513	0.49	0.87	0.67	0.77	0.6248	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.720404	NA	NA	0.529419	0.72946	NA	0.616	NA	4.0025476
1252	19	1954128	1954128	T	C	ncRNA_exonic	CSNK1G2-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000180846	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs34797288	NA	NA	NA	0.501198	0.665	0.4752	0.5634	0.2943	0.5951	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.051117	NA	NA	NA	NA	NA	NA	NA	4.0016666
1252	7	100552984	100552984	T	C	intergenic	ACHE,MUC12	dist=59443;dist=59920	NA	NA	exonic	ENSG00000169894	NA	synonymous SNV	ENSG00000169894:ENST00000414964:exon1:c.T99C:p.G33G,ENSG00000169894:ENST00000422757:exon1:c.T99C:p.G33G,ENSG00000169894:ENST00000319509:exon2:c.T1629C:p.G543G	NA	NA	7q22.1	NA	NA	NA	NA	rs73163766	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4986	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.091581	NA	NA	NA	NA	NA	0.493	NA	4.0014
1252	11	67262289	67262289	G	A	intronic	PITPNM1	NA	NA	NA	intronic	ENSG00000110697	NA	NA	NA	NA	NA	11q13.2	NA	Name=Egr-1	NA	NA	rs7932071	0.54	0.54	0.625	0.844449	0.9881	0.9881	0.9582	0.4531	0.9969	0.59	0.58	0.56	0.39	0.0105	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.719432	NA	NA	NA	NA	NA	0.529	NA	4.0014
1252	4	159928907	159928907	G	A	intronic	C4orf45	NA	NA	NA	ncRNA_exonic	ENSG00000248988	NA	NA	NA	NA	NA	4q32.1	NA	NA	NA	NA	rs12498847	0.31	0.31	0.27	0.334864	0.332	0.3988	0.3372	0.2186	0.4274	0.33	0.37	0.32	0.18	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.147256	NA	NA	NA	NA	NA	0.37	NA	4.0013333
1252	19	3546185	3546185	G	A	intronic	MFSD12	NA	NA	NA	ncRNA_intronic	ENSG00000267436	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs878493	0.05	0.05	0.044	0.0527157	0.1054	NA	0.0879	0.0061	0.091	0.11	NA	0.06	0.01	0.1034	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.848372	NA	NA	0.123381	0.019447	NA	0.065	NA	4.0011523
1252	2	43800174	43800174	A	G	intronic	THADA	NA	NA	NA	intronic	ENSG00000115970	NA	NA	NA	NA	NA	2p21	Score=914;Name=V$CEBP_Q2	NA	NA	NA	rs11898207	0.32	0.32	0.337	0.351238	0.341	0.2649	0.2305	0.4017	0.4683	0.34	0.29	0.26	0.39	0.3182	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.371177	2.371177	NA	0.339736	0.369778	NA	0.348	NA	4.001064
1252	1	152382062	152382062	C	T	UTR3	CRNN	NM_016190:c.*8G>A	NA	NA	ncRNA_UTR3	ENSG00000143536	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs10888486	0.22	0.22	0.19	0.234425	0.1431	0.4296	0.3689	0.0189	0.3231	0.14	0.44	0.3	0.02	0.2041	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.533906	NA	NA	0.15186	0.041307	NA	0.174	NA	4.00094
1252	11	94231257	94231257	C	G	exonic	ANKRD49	NA	synonymous SNV	ANKRD49:NM_017704:exon3:c.C279G:p.L93L	exonic	ENSG00000168876	NA	synonymous SNV	ENSG00000168876:ENST00000302755:exon2:c.C279G:p.L93L,ENSG00000168876:ENST00000535502:exon3:c.C156G:p.L52L,ENSG00000168876:ENST00000544612:exon3:c.C279G:p.L93L,ENSG00000168876:ENST00000545130:exon3:c.C384G:p.L128L	NA	NA	11q21	NA	NA	NA	NA	rs2509943	0.54	0.54	0.547	0.547524	0.5537	0.5208	0.5202	0.6604	0.4356	0.57	0.47	0.52	0.62	0.5411	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.095539	NA	NA	0.570963	0.626533	NA	0.616	NA	4.0009036
1252	17	56695008	56695008	C	A	intronic	TEX14	NA	NA	NA	intronic	ENSG00000121101	NA	NA	NA	NA	NA	17q22	NA	NA	Name=8	NA	rs302860	0.22	0.22	0.211	0.205072	0.3748	0.001	0.2089	0.261	0.1626	0.35	0.0017	0.25	0.26	0.2772	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.161956	NA	NA	0.347523	0.278964	NA	0.319	NA	4.000477
1252	11	9715646	9715646	T	C	intronic	SWAP70	NA	NA	NA	intronic	ENSG00000133789	NA	NA	NA	NA	NA	11p15.4	NA	Name=CTCF,USF-1	Name=7	NA	rs3763865	0.56	0.56	0.499	0.551917	0.7008	0.5417	0.6715	0.2534	0.728	0.69	0.53	0.71	0.29	0.637	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.219835	NA	NA	0.661854	0.310313	NA	0.449	NA	4.000346
1252	12	48877193	48877193	T	C	intronic	C12orf54	NA	NA	NA	ncRNA_exonic	ENSG00000258121	NA	NA	NA	NA	NA	12q13.11	NA	NA	NA	NA	rs11832311	0.28	0.28	0.229	0.288339	0.0815	0.6548	0.3357	0.1528	0.273	0.09	0.63	0.3	0.14	0.1874	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.449774	NA	NA	0.064186	0.151384	NA	0.174	NA	4.0002473
1252	7	100550133	100550133	A	G	intergenic	ACHE,MUC12	dist=56592;dist=62771	NA	NA	exonic	ENSG00000228273	NA	synonymous SNV	ENSG00000228273:ENST00000379458:exon2:c.A714G:p.T238T	NA	NA	7q22.1	NA	NA	NA	NA	rs74197937	NA	NA	NA	0.000399361	NA	0.001	0.0014	NA	NA	NA	NA	NA	NA	0.4998	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.605704	NA	NA	NA	NA	NA	0.486	NA	4.0002
1252	7	149559465	149559465	C	T	exonic	ZNF862	NA	synonymous SNV	ZNF862:NM_001099220:exon7:c.C3216T:p.G1072G	exonic	ENSG00000106479	NA	synonymous SNV	ENSG00000106479:ENST00000223210:exon7:c.C3216T:p.G1072G	NA	NA	7q36.1	NA	NA	NA	NA	rs2074701	0.48	0.48	0.488	0.437899	0.5686	0.3264	0.487	0.4743	0.3344	0.56	0.35	0.51	0.48	0.5093	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.205542	NA	NA	0.588655	0.512649	ID=COSM452588;OCCURENCE=1(breast)	0.529	NA	4.0001116
1252	7	100549788	100549788	A	G	intergenic	ACHE,MUC12	dist=56247;dist=63116	NA	NA	exonic	ENSG00000228273	NA	synonymous SNV	ENSG00000228273:ENST00000379458:exon2:c.A369G:p.S123S	NA	NA	7q22.1	NA	NA	NA	NA	rs78113948	NA	NA	NA	0.000399361	NA	NA	0.0014	NA	0.001	NA	NA	NA	NA	0.4999	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.914492	NA	NA	NA	NA	NA	NA	NA	4.0001
1252	7	100552044	100552044	T	G	intergenic	ACHE,MUC12	dist=58503;dist=60860	NA	NA	exonic	ENSG00000169894	NA	synonymous SNV	ENSG00000169894:ENST00000319509:exon1:c.T795G:p.S265S	NA	NA	7q22.1	NA	NA	NA	NA	rs73714250	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4999	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.385765	NA	NA	NA	NA	NA	0.174	NA	4.0001
1252	1	884091	884091	C	G	intronic	NOC2L	NA	NA	NA	intronic	ENSG00000188976	NA	NA	NA	NA	NA	1p36.33	NA	NA	NA	NA	rs7522415	NA	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.181702	NA	NA	NA	NA	NA	0.42	NA	4
1252	1	884101	884101	A	C	intronic	NOC2L	NA	NA	NA	intronic	ENSG00000188976	NA	NA	NA	NA	NA	1p36.33	NA	NA	NA	NA	rs4970455	NA	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.088214	NA	NA	NA	NA	NA	0.181	NA	4
1252	1	1275291	1275291	G	A	intronic	DVL1	NA	NA	NA	intronic	ENSG00000107404	NA	NA	NA	NA	NA	1p36.33	NA	NA	NA	NA	rs11582808	0.51	0.51	0.27	NA	NA	NA	NA	NA	NA	0.51	0.49	0.5	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.822698	NA	NA	NA	NA	NA	0.116	NA	4
1252	1	2628069	2628069	G	T	intronic	TTC34	NA	NA	NA	intronic	ENSG00000215912	NA	NA	NA	NA	NA	1p36.32	NA	NA	NA	NA	rs61766464	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.299472	NA	NA	NA	NA	NA	0.123	NA	4
1252	1	12908333	12908333	T	C	intronic	HNRNPCL1	NA	NA	NA	intronic	ENSG00000179172	NA	NA	NA	NA	NA	1p36.21	NA	NA	NA	NA	rs1737106	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.238381	NA	NA	NA	NA	NA	0.138	NA	4
1252	1	12940117	12940117	C	G	intronic	PRAMEF4	NA	NA	NA	intronic	ENSG00000243073	NA	NA	NA	NA	NA	1p36.21	NA	NA	NA	NA	rs28459245	NA	NA	0.504	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.879234	NA	NA	NA	NA	NA	NA	NA	4
1252	1	15890355	15890355	A	G	intronic	DNAJC16	NA	NA	NA	intronic	ENSG00000116138	NA	NA	NA	NA	NA	1p36.21	NA	NA	NA	NA	rs6429750	0.1	0.1	NA	NA	NA	NA	NA	NA	NA	0.09	0.03	0.06	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.210409	NA	NA	NA	NA	NA	0.152	NA	4
1252	1	16363042	16363042	C	T	intergenic	CLCNKA,CLCNKB	dist=2497;dist=7189	NA	NA	ncRNA_intronic	ENSG00000232456	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs2008876	NA	NA	0.167	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.700139	NA	NA	NA	NA	NA	NA	NA	4
1252	1	16907124	16907124	A	C	intronic	NBPF1	NA	NA	NA	intronic	ENSG00000219481	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs615115	NA	NA	0.671	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.217068	NA	NA	NA	NA	NA	NA	NA	4
1252	1	16913416	16913416	G	C	intronic	NBPF1	NA	NA	NA	intronic	ENSG00000219481	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs76915367	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.194207	NA	NA	NA	NA	NA	NA	NA	4
1252	1	16959551	16959551	T	C	intergenic	CROCCP2,MST1P2	dist=2150;dist=12518	NA	NA	ncRNA_intronic	ENSG00000215908	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs849696	NA	NA	0.388	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.021928	NA	NA	NA	NA	NA	0.268	NA	4
1252	1	16969381	16969381	C	T	intergenic	CROCCP2,MST1P2	dist=11980;dist=2688	NA	NA	ncRNA_intronic	ENSG00000215908	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs9727604	NA	NA	0.627	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.442016	NA	NA	NA	NA	NA	0.514	NA	4
1252	1	17250762	17250762	G	C	intronic	CROCC	NA	NA	NA	intronic	ENSG00000058453	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs58609892	NA	NA	0.338	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.369044	NA	NA	NA	NA	NA	0.297	NA	4
1252	1	42664971	42664971	T	C	intronic	FOXJ3	NA	NA	NA	intronic	ENSG00000198815	NA	NA	NA	NA	NA	1p34.2	NA	NA	NA	NA	rs144671166	0.0009	0.0009	0.001	0.000399361	NA	0.001	0.0014	NA	NA	NA	0.0017	0.0028	NA	NA	0.0028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.037299	NA	NA	NA	NA	NA	NA	NA	4
1252	1	46818213	46818213	C	G	intronic	NSUN4	NA	NA	NA	intronic	ENSG00000117481	NA	NA	NA	NA	NA	1p33	NA	NA	NA	NA	rs72677590	0.16	0.16	0.152	NA	NA	NA	NA	NA	NA	0.27	0.02	0.17	0.13	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.950033	NA	NA	NA	NA	NA	0.217	NA	4
1252	1	55337380	55337380	A	G	intronic	DHCR24	NA	NA	NA	intronic	ENSG00000116133	NA	NA	NA	NA	NA	1p32.3	NA	NA	NA	NA	rs2303535	0.05	0.05	0.059	0.061901	NA	0.1369	0.0029	0.087	0.0562	NA	0.13	NA	0.07	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.732206	NA	NA	NA	NA	NA	0.08	NA	4
1252	1	110211835	110211835	T	C	intronic	GSTM2	NA	NA	NA	intronic	ENSG00000213366	NA	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	rs402505	NA	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.468277	NA	NA	NA	NA	NA	0.478	NA	4
1252	1	144854730	144854730	A	G	intronic	NBPF9,PDE4DIP	NA	NA	NA	intronic	ENSG00000178104	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs75855616	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.611712	NA	NA	NA	NA	NA	NA	NA	4
1252	1	144854750	144854750	G	A	intronic	NBPF9,PDE4DIP	NA	NA	NA	intronic	ENSG00000178104	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs75538208	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.430083	NA	NA	NA	NA	NA	NA	NA	4
1252	1	144854761	144854761	T	C	intronic	NBPF9,PDE4DIP	NA	NA	NA	intronic	ENSG00000178104	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs79445592	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.535474	NA	NA	NA	NA	NA	NA	NA	4
1252	1	144854765	144854765	T	C	intronic	NBPF9,PDE4DIP	NA	NA	NA	intronic	ENSG00000178104	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs78741893	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.758865	NA	NA	NA	NA	NA	NA	NA	4
1252	1	144857876	144857876	T	G	intronic	NBPF9,PDE4DIP	NA	NA	NA	intronic	ENSG00000178104	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs1698578	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.660989	NA	NA	NA	NA	NA	0.493	NA	4
1252	1	144866509	144866509	G	A	intronic	NBPF9,PDE4DIP	NA	NA	NA	intronic	ENSG00000178104	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs924667	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.546442	NA	NA	NA	NA	NA	0.5	NA	4
1252	1	144873818	144873818	A	G	intronic	NBPF9,PDE4DIP	NA	NA	NA	intronic	ENSG00000178104	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs1610566	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.493663	NA	NA	NA	NA	NA	0.493	NA	4
1252	1	144874088	144874088	G	C	intronic	NBPF9,PDE4DIP	NA	NA	NA	intronic	ENSG00000178104	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs1419158	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.061447	NA	NA	NA	NA	NA	0.493	NA	4
1252	1	144878928	144878928	G	T	intronic	NBPF9,PDE4DIP	NA	NA	NA	intronic	ENSG00000178104	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs2762876	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.239573	NA	NA	NA	NA	NA	0.5	NA	4
1252	1	144919094	144919094	C	T	intronic	NBPF9,PDE4DIP	NA	NA	NA	intronic	ENSG00000178104	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs1698680	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.006538	NA	NA	NA	NA	NA	0.5	NA	4
1252	1	144922109	144922109	A	G	intronic	NBPF9,PDE4DIP	NA	NA	NA	intronic	ENSG00000178104	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs1343469	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.486808	NA	NA	NA	NA	NA	0.5	NA	4
1252	1	145021024	145021024	G	C	intronic	NBPF9,PDE4DIP	NA	NA	NA	intronic	ENSG00000178104	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs1778692	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.95728	NA	NA	NA	NA	NA	0.341	NA	4
1252	1	145281203	145281203	G	A	intronic	NBPF9,NOTCH2NL	NA	NA	NA	intronic	ENSG00000213240,ENSG00000255168	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs10910785	NA	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.013034	NA	NA	NA	NA	NA	0.283	NA	4
1252	1	148004883	148004883	T	A	intronic	NBPF14,NBPF8	NA	NA	NA	intronic	ENSG00000122497	NA	NA	NA	NA	NA	1q21.2	NA	NA	NA	NA	rs148664595	NA	NA	0.532	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.821132	NA	NA	NA	NA	NA	NA	NA	4
1252	1	148889551	148889551	T	A	intergenic	PPIAL4F,LOC645166	dist=82752;dist=38735	NA	NA	ncRNA_intronic	ENSG00000231448	NA	NA	NA	NA	NA	1q21.2	NA	NA	NA	NA	rs151021	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.093855	NA	NA	NA	NA	NA	NA	NA	4
1252	1	153742610	153742610	G	T	intronic	INTS3	NA	NA	NA	intronic	ENSG00000143624	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs12120312	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-3.040454	NA	NA	NA	NA	NA	0.058	NA	4
1252	1	154494082	154494082	G	C	intronic	TDRD10	NA	NA	NA	intronic	ENSG00000163239	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs4269769	0.82	0.82	0.805	NA	NA	NA	NA	NA	NA	0.83	0.92	0.86	0.64	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.375034	NA	NA	NA	NA	NA	0.783	NA	4
1252	1	154794505	154794505	G	A	intronic	KCNN3	NA	NA	NA	intronic	ENSG00000143603	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs114043131	0.01	0.01	0.009	0.00738818	NA	NA	0.0029	0.0265	NA	NA	NA	0.0028	0.04	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.095922	NA	NA	NA	NA	NA	NA	NA	4
1252	1	196398619	196398619	T	C	intronic	KCNT2	NA	NA	NA	intronic	ENSG00000162687	NA	NA	NA	NA	NA	1q31.3	NA	NA	NA	NA	rs1538684	0.49	0.49	0.447	NA	NA	NA	NA	NA	NA	0.58	0.63	0.53	0.15	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.292487	NA	NA	NA	NA	NA	0.486	NA	4
1252	1	197513931	197513931	A	G	intronic	DENND1B	NA	NA	NA	intronic	ENSG00000213047	NA	NA	NA	NA	NA	1q31.3	NA	NA	NA	NA	rs6665511	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.608776	NA	NA	NA	NA	NA	0.072	NA	4
1252	1	209785011	209785011	G	C	intronic	CAMK1G	NA	NA	NA	intronic	ENSG00000008118	NA	NA	NA	NA	NA	1q32.2	NA	NA	NA	NA	rs2076226	0.39	0.39	0.397	NA	NA	NA	NA	NA	NA	0.37	0.38	0.37	0.46	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.162638	NA	NA	NA	NA	NA	0.522	NA	4
1252	1	227171738	227171738	G	T	intronic	ADCK3	NA	NA	NA	intronic	ENSG00000163050	NA	NA	NA	NA	NA	1q42.13	NA	NA	NA	NA	rs377335668	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.062806	NA	NA	NA	NA	NA	NA	NA	4
1252	1	233490536	233490536	A	G	intronic	KIAA1804	NA	NA	NA	intronic	ENSG00000143674	NA	NA	NA	NA	NA	1q42.2	NA	NA	NA	NA	rs12406625	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.075377	NA	NA	NA	NA	NA	NA	NA	4
1252	1	247597208	247597208	T	G	intronic	NLRP3	NA	NA	NA	intronic	ENSG00000162711	NA	NA	NA	NA	NA	1q44	NA	NA	NA	NA	rs113966299	NA	NA	0.091	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.975413	NA	NA	NA	NA	NA	NA	NA	4
1252	1	247597211	247597211	T	C	intronic	NLRP3	NA	NA	NA	intronic	ENSG00000162711	NA	NA	NA	NA	NA	1q44	NA	NA	NA	NA	rs112695411	NA	NA	0.088	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.874642	NA	NA	NA	NA	NA	NA	NA	4
1252	1	247597223	247597223	G	A	intronic	NLRP3	NA	NA	NA	intronic	ENSG00000162711	NA	NA	NA	NA	NA	1q44	NA	NA	NA	NA	rs111632834	NA	NA	0.113	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.425351	NA	NA	NA	NA	NA	NA	NA	4
1252	1	247597239	247597239	G	A	intronic	NLRP3	NA	NA	NA	intronic	ENSG00000162711	NA	NA	NA	NA	NA	1q44	NA	NA	NA	NA	rs78648901	NA	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.723092	NA	NA	NA	NA	NA	0.007	NA	4
1252	2	39088032	39088032	G	T	intronic	DHX57	NA	NA	NA	intronic	ENSG00000163214	NA	NA	NA	NA	NA	2p22.1	NA	NA	NA	NA	rs376379073	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.037489	NA	NA	NA	NA	NA	NA	NA	4
1252	2	46583187	46583187	A	T	intronic	EPAS1	NA	NA	NA	intronic	ENSG00000116016	NA	NA	NA	NA	NA	2p21	NA	NA	NA	NA	rs2278754	0.12	0.12	0.088	NA	NA	NA	NA	NA	NA	0.12	0.07	0.27	0.1	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.112124	NA	NA	NA	NA	NA	0.13	NA	4
1252	2	79254065	79254065	C	T	intronic	REG3G	NA	NA	NA	intronic	ENSG00000143954	NA	NA	NA	NA	NA	2p12	NA	NA	NA	NA	rs431912	0.38	0.38	0.269	NA	NA	NA	NA	NA	NA	0.31	0.45	0.39	0.4	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.245135	NA	NA	NA	NA	NA	0.413	NA	4
1252	2	91782803	91782803	G	A	intergenic	NONE,LOC654342	dist=NONE;dist=41906	NA	NA	ncRNA_intronic	ENSG00000233991	NA	NA	NA	NA	NA	2p11.1	NA	NA	NA	NA	rs2599167	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.642075	NA	NA	NA	NA	NA	0.5	NA	4
1252	2	91795381	91795381	A	C	intergenic	NONE,LOC654342	dist=NONE;dist=29328	NA	NA	ncRNA_intronic	ENSG00000233991	NA	NA	NA	NA	NA	2p11.1	NA	NA	NA	NA	rs4244683	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.65475	NA	NA	NA	NA	NA	0.761	NA	4
1252	2	91799977	91799977	C	G	intergenic	NONE,LOC654342	dist=NONE;dist=24732	NA	NA	ncRNA_intronic	ENSG00000233991	NA	NA	NA	NA	NA	2p11.1	NA	NA	NA	NA	rs2531388	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.493524	NA	NA	NA	NA	NA	0.5	NA	4
1252	2	91800715	91800715	A	G	intergenic	NONE,LOC654342	dist=NONE;dist=23994	NA	NA	ncRNA_exonic	ENSG00000233991	NA	NA	NA	NA	NA	2p11.1	NA	NA	NA	NA	rs1640040	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.644322	NA	NA	NA	NA	NA	0.5	NA	4
1252	2	116101335	116101335	C	T	intronic	DPP10	NA	NA	NA	intronic	ENSG00000175497	NA	NA	NA	NA	NA	2q14.1	NA	NA	NA	NA	rs76093479	0.02	0.02	0.021	0.0205671	NA	NA	0.0086	0.0734	NA	NA	NA	0.01	0.09	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.183035	NA	NA	NA	NA	NA	0.022	NA	4
1252	2	130970889	130970889	G	A	intergenic	TUBA3E,CCDC115	dist=14855;dist=124927	NA	NA	ncRNA_exonic	ENSG00000230756	NA	NA	NA	NA	NA	2q21.1	NA	NA	NA	NA	rs62165111	0.33	0.33	0.262	NA	NA	NA	NA	NA	NA	0.33	0.32	0.38	0.29	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.530663	NA	NA	NA	NA	NA	0.072	NA	4
1252	2	133070508	133070508	G	T	intergenic	ANKRD30BL,GPR39	dist=54966;dist=103639	NA	NA	ncRNA_exonic	ENSG00000018607	NA	NA	NA	NA	NA	2q21.2	NA	NA	NA	NA	rs7340197	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.514539	NA	NA	NA	NA	NA	0.478	NA	4
1252	2	133070531	133070531	C	T	intergenic	ANKRD30BL,GPR39	dist=54989;dist=103616	NA	NA	ncRNA_exonic	ENSG00000018607	NA	NA	NA	NA	NA	2q21.2	NA	NA	NA	NA	rs7340370	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.252624	NA	NA	NA	NA	NA	0.486	NA	4
1252	2	133070556	133070556	T	C	intergenic	ANKRD30BL,GPR39	dist=55014;dist=103591	NA	NA	ncRNA_exonic	ENSG00000018607	NA	NA	NA	NA	NA	2q21.2	NA	NA	NA	NA	rs7355766	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.476263	NA	NA	NA	NA	NA	0.297	NA	4
1252	2	133070656	133070656	T	G	intergenic	ANKRD30BL,GPR39	dist=55114;dist=103491	NA	NA	ncRNA_intronic	ENSG00000018607	NA	NA	NA	NA	NA	2q21.2	NA	NA	NA	NA	rs2459648	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.675654	NA	NA	NA	NA	NA	0.5	NA	4
1252	2	133070685	133070685	C	T	intergenic	ANKRD30BL,GPR39	dist=55143;dist=103462	NA	NA	ncRNA_intronic	ENSG00000018607	NA	NA	NA	NA	NA	2q21.2	NA	NA	NA	NA	rs2443273	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.601228	NA	NA	NA	NA	NA	0.5	NA	4
1252	2	133075027	133075027	G	A	intergenic	ANKRD30BL,GPR39	dist=59485;dist=99120	NA	NA	ncRNA_exonic	ENSG00000018607	NA	NA	NA	NA	NA	2q21.2	NA	NA	NA	NA	rs7349198	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.680951	NA	NA	NA	NA	NA	0.486	NA	4
1252	2	133075104	133075104	C	T	intergenic	ANKRD30BL,GPR39	dist=59562;dist=99043	NA	NA	ncRNA_exonic	ENSG00000018607	NA	NA	NA	NA	NA	2q21.2	NA	NA	NA	NA	rs7349364	NA	NA	NA	0.000399361	NA	0.002	NA	NA	NA	NA	NA	NA	NA	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.046506	NA	NA	NA	NA	NA	0.449	NA	4
1252	2	133075207	133075207	C	T	intergenic	ANKRD30BL,GPR39	dist=59665;dist=98940	NA	NA	ncRNA_exonic	ENSG00000018607	NA	NA	NA	NA	NA	2q21.2	NA	NA	NA	NA	rs7349365	NA	NA	NA	0.000399361	NA	NA	NA	NA	0.002	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.117064	NA	NA	NA	NA	NA	0.5	NA	4
1252	2	133075282	133075282	T	C	intergenic	ANKRD30BL,GPR39	dist=59740;dist=98865	NA	NA	ncRNA_exonic	ENSG00000018607	NA	NA	NA	NA	NA	2q21.2	NA	NA	NA	NA	rs7349446	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.199939	NA	NA	NA	NA	NA	0.493	NA	4
1252	2	133075364	133075364	T	C	intergenic	ANKRD30BL,GPR39	dist=59822;dist=98783	NA	NA	ncRNA_exonic	ENSG00000018607	NA	NA	NA	NA	NA	2q21.2	NA	NA	NA	NA	rs7349447	NA	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.317679	NA	NA	NA	NA	NA	NA	NA	4
1252	2	133075365	133075365	G	A	intergenic	ANKRD30BL,GPR39	dist=59823;dist=98782	NA	NA	ncRNA_exonic	ENSG00000018607	NA	NA	NA	NA	NA	2q21.2	NA	NA	NA	NA	rs7349215	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.244208	NA	NA	NA	NA	NA	NA	NA	4
1252	2	133075409	133075409	T	C	intergenic	ANKRD30BL,GPR39	dist=59867;dist=98738	NA	NA	ncRNA_exonic	ENSG00000018607	NA	NA	NA	NA	NA	2q21.2	NA	NA	NA	NA	rs7349448	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.247262	NA	NA	NA	NA	NA	0.181	NA	4
1252	2	133075602	133075602	A	C	intergenic	ANKRD30BL,GPR39	dist=60060;dist=98545	NA	NA	ncRNA_exonic	ENSG00000018607	NA	NA	NA	NA	NA	2q21.2	NA	NA	NA	NA	rs7340473	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.069174	NA	NA	NA	NA	NA	0.5	NA	4
1252	2	133075612	133075612	C	T	intergenic	ANKRD30BL,GPR39	dist=60070;dist=98535	NA	NA	ncRNA_exonic	ENSG00000018607	NA	NA	NA	NA	NA	2q21.2	NA	NA	NA	NA	rs11491243	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.56424	NA	NA	NA	NA	NA	0.5	NA	4
1252	2	133075664	133075664	T	G	intergenic	ANKRD30BL,GPR39	dist=60122;dist=98483	NA	NA	ncRNA_exonic	ENSG00000018607	NA	NA	NA	NA	NA	2q21.2	NA	NA	NA	NA	rs7340499	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.153421	NA	NA	NA	NA	NA	0.464	NA	4
1252	3	10035785	10035785	A	G	intergenic	EMC3,LOC401052	dist=7263;dist=12317	NA	NA	ncRNA_intronic	ENSG00000180385	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs201160697	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.444739	NA	NA	NA	NA	NA	NA	NA	4
1252	3	64600829	64600829	C	T	intronic	ADAMTS9	NA	NA	NA	intronic	ENSG00000163638	NA	NA	NA	NA	NA	3p14.1	NA	NA	NA	NA	rs56869336	0.29	0.29	0.287	NA	NA	NA	NA	NA	NA	0.14	0.48	0.2	0.35	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.496297	NA	NA	NA	NA	NA	0.312	NA	4
1252	3	71026263	71026263	G	A	intronic	FOXP1	NA	NA	NA	intronic	ENSG00000114861	NA	NA	NA	NA	NA	3p13	NA	NA	NA	NA	rs141214190	0.0037	0.0037	0.002	0.00439297	NA	NA	0.0043	0.0144	NA	NA	NA	0.01	0.01	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.21628	NA	NA	NA	NA	NA	NA	NA	4
1252	3	195475989	195475989	G	A	intronic	MUC4	NA	NA	NA	intronic	ENSG00000145113	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs7621695	NA	NA	0.205	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.405981	NA	NA	NA	NA	NA	0.246	NA	4
1252	4	25390066	25390066	G	A	intronic	ANAPC4	NA	NA	NA	intronic	ENSG00000053900	NA	NA	NA	NA	NA	4p15.2	NA	NA	NA	NA	rs145109761	0.0032	0.0032	0.006	0.00359425	NA	NA	0.0043	0.0113	NA	NA	NA	0.01	0.01	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.539184	1.539184	NA	NA	NA	NA	NA	NA	4
1252	4	73154640	73154640	T	C	intronic	ADAMTS3	NA	NA	NA	intronic	ENSG00000156140	NA	NA	NA	NA	NA	4q13.3	NA	NA	NA	NA	rs74873938	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.2888	NA	NA	NA	NA	NA	0.029	NA	4
1252	4	74804553	74804553	T	C	intergenic	CXCL1,PF4	dist=67534;dist=41989	NA	NA	ncRNA_exonic	ENSG00000249920	NA	NA	NA	NA	NA	4q13.3	NA	NA	NA	NA	rs113912954	0.07	0.07	0.074	0.0966454	NA	0.0069	0.036	0.3079	0.046	NA	0.01	0.03	0.3	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.578849	NA	NA	NA	NA	NA	0.08	NA	4
1252	4	137277225	137277225	C	T	intergenic	NONE,PCDH18	dist=NONE;dist=1162849	NA	NA	ncRNA_exonic	ENSG00000249311	NA	NA	NA	NA	NA	4q28.3	NA	NA	NA	NA	rs61734727	0.02	0.02	0.016	0.0189696	NA	NA	0.0043	0.0696	NA	NA	NA	0.0028	0.08	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.33212	NA	NA	NA	NA	NA	0.014	NA	4
1252	5	1325767	1325767	A	G	intronic	CLPTM1L	NA	NA	NA	intronic	ENSG00000049656	NA	NA	NA	NA	NA	5p15.33	NA	NA	NA	NA	rs466502	0.39	0.39	0.368	NA	NA	NA	NA	NA	NA	0.46	0.16	0.35	0.57	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.414424	NA	NA	NA	NA	NA	0.341	NA	4
1252	5	35956026	35956026	T	C	intronic	UGT3A1	NA	NA	NA	intronic	ENSG00000145626	NA	NA	NA	NA	NA	5p13.2	NA	NA	NA	NA	rs768621	0.34	0.34	0.333	NA	NA	NA	NA	NA	NA	0.42	0.12	0.36	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.089584	NA	NA	NA	NA	NA	0.478	NA	4
1252	5	110284775	110284775	C	A	intergenic	SLC25A46,TSLP	dist=186291;dist=122615	NA	NA	ncRNA_exonic	ENSG00000248966	NA	NA	NA	NA	NA	5q22.1	NA	NA	NA	NA	rs73222496	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.607678	NA	NA	NA	NA	NA	0.384	NA	4
1252	5	110286479	110286479	G	A	intergenic	SLC25A46,TSLP	dist=187995;dist=120911	NA	NA	ncRNA_exonic	ENSG00000248966	NA	NA	NA	NA	NA	5q22.1	NA	NA	NA	NA	rs79643506	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.018462	NA	NA	NA	NA	NA	0.13	NA	4
1252	5	153085696	153085696	T	G	intronic	GRIA1	NA	NA	NA	intronic	ENSG00000155511	NA	NA	NA	NA	NA	5q33.2	NA	NA	NA	NA	rs77927355	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.903864	NA	NA	NA	NA	NA	NA	NA	4
1252	5	157415279	157415279	A	G	intergenic	CLINT1,EBF1	dist=129096;dist=707644	NA	NA	ncRNA_intronic	ENSG00000253743	NA	NA	NA	NA	NA	5q33.3	NA	NA	NA	NA	rs113042439	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.255898	NA	NA	NA	NA	NA	NA	NA	4
1252	5	175923431	175923431	G	A	intronic	FAF2	NA	NA	NA	intronic	ENSG00000113194	NA	NA	NA	NA	NA	5q35.2	NA	NA	NA	NA	rs2963670	0.46	0.46	0.43	NA	NA	NA	NA	NA	NA	0.52	0.41	0.49	0.4	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.144879	NA	NA	NA	NA	NA	0.355	NA	4
1252	6	335268	335268	C	T	intronic	DUSP22	NA	NA	NA	intronic	ENSG00000112679	NA	NA	NA	NA	NA	6p25.3	NA	NA	NA	NA	rs4959733	NA	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.442158	NA	NA	NA	NA	NA	0.536	NA	4
1252	6	10697775	10697775	C	T	intronic	PAK1IP1	NA	NA	NA	intronic	ENSG00000111845	NA	NA	NA	NA	NA	6p24.2	NA	NA	NA	NA	rs113503688	0.0027	0.0027	0.004	0.00519169	NA	NA	0.0014	0.0189	NA	NA	NA	0.0028	0.01	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.377896	NA	NA	NA	NA	NA	NA	NA	4
1252	6	32713487	32713487	G	A	intronic	HLA-DQA2	NA	NA	NA	intronic	ENSG00000237541	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs2239799	0.46	0.46	0.445	NA	NA	NA	NA	NA	NA	0.45	0.6	0.43	0.34	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.97464	NA	NA	NA	NA	NA	0.486	NA	4
1252	6	57372199	57372199	T	C	intronic	PRIM2	NA	NA	NA	intronic	ENSG00000146143	NA	NA	NA	NA	NA	6p11.2	NA	NA	NA	NA	rs9382769	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.341278	NA	NA	NA	NA	NA	0.5	NA	4
1252	6	57398081	57398081	T	G	intronic	PRIM2	NA	NA	NA	intronic	ENSG00000146143	NA	NA	NA	NA	NA	6p11.2	NA	NA	NA	NA	rs7753294	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.022962	NA	NA	NA	NA	NA	0.486	NA	4
1252	6	57466987	57466987	T	C	intronic	PRIM2	NA	NA	NA	intronic	ENSG00000146143	NA	NA	NA	NA	NA	6p11.2	NA	NA	NA	NA	rs12205887	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.787369	NA	NA	NA	NA	NA	0.5	NA	4
1252	6	116774270	116774270	T	C	intergenic	DSE,FAM26F	dist=14828;dist=8263	NA	NA	ncRNA_exonic	ENSG00000217241	NA	NA	NA	NA	NA	6q22.1	NA	NA	NA	NA	rs62425223	NA	NA	0.182	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.231054	NA	NA	NA	NA	NA	0.283	NA	4
1252	6	150114606	150114606	C	T	intronic	PCMT1	NA	NA	NA	intronic	ENSG00000120265	NA	NA	NA	NA	NA	6q25.1	NA	NA	NA	NA	rs12182220	0.64	0.64	0.625	NA	NA	NA	NA	NA	NA	0.35	0.8	0.63	0.89	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.677239	NA	NA	NA	NA	NA	0.71	NA	4
1252	6	170866249	170866249	C	T	intronic	TBP	NA	NA	NA	intronic	ENSG00000112592	NA	NA	NA	NA	NA	6q27	NA	NA	NA	NA	rs186508667	0.0018	0.0018	NA	0.00139776	NA	NA	0.0101	NA	NA	NA	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.688656	NA	NA	NA	NA	NA	NA	NA	4
1252	7	65238652	65238652	A	G	intergenic	LOC441242,VKORC1L1	dist=2855;dist=99605	NA	NA	ncRNA_exonic	ENSG00000224316	NA	NA	NA	NA	NA	7q11.21	NA	NA	NA	NA	rs56387999	NA	NA	0.39	0.00199681	NA	NA	0.0029	NA	0.0082	NA	NA	NA	NA	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.123481	NA	NA	NA	NA	NA	0.304	NA	4
1252	7	65238697	65238697	C	T	intergenic	LOC441242,VKORC1L1	dist=2900;dist=99560	NA	NA	ncRNA_exonic	ENSG00000224316	NA	NA	NA	NA	NA	7q11.21	NA	NA	NA	NA	rs55919100	NA	NA	0.338	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.381008	NA	NA	NA	NA	NA	0.007	NA	4
1252	7	121943610	121943610	G	A	intronic	FEZF1	NA	NA	NA	intronic	ENSG00000128610	NA	NA	NA	NA	NA	7q31.32	NA	NA	NA	NA	rs185800077	0.2	0.2	NA	NA	NA	NA	NA	NA	NA	0.31	0.06	0.2	0.18	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.287187	NA	NA	NA	NA	NA	NA	NA	4
1252	7	139746632	139746632	G	C	intronic	PARP12	NA	NA	NA	intronic	ENSG00000059378	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs57397446	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.963111	NA	NA	NA	NA	NA	NA	NA	4
1252	7	139746633	139746633	T	A	intronic	PARP12	NA	NA	NA	intronic	ENSG00000059378	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs60699868	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.632639	NA	NA	NA	NA	NA	NA	NA	4
1252	7	141760228	141760228	T	C	intronic	MGAM	NA	NA	NA	intronic	ENSG00000257335	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs6959057	NA	NA	0.373	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.278622	NA	NA	NA	NA	NA	0.261	NA	4
1252	7	142460107	142460107	G	A	intronic	PRSS1	NA	NA	NA	intronic	ENSG00000204983	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs371923665	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.095465	NA	NA	NA	NA	NA	NA	NA	4
1252	7	142460148	142460148	T	C	intronic	PRSS1	NA	NA	NA	intronic	ENSG00000204983	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs375261945	NA	NA	NA	0.000998403	NA	NA	NA	0.0038	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.550523	NA	NA	NA	NA	NA	NA	NA	4
1252	7	151971043	151971043	T	C	intronic	MLL3	NA	NA	NA	intronic	ENSG00000055609	NA	NA	NA	NA	NA	7q36.1	NA	NA	NA	NA	rs2360885	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.67066	NA	NA	NA	NA	NA	0.268	NA	4
1252	7	154679562	154679562	C	A	intronic	DPP6	NA	NA	NA	intronic	ENSG00000130226	NA	NA	NA	NA	NA	7q36.2	NA	NA	NA	NA	rs7783439	0.01	0.01	0.018	0.0139776	NA	NA	0.0058	0.0499	NA	NA	NA	0.01	0.05	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.209554	NA	NA	NA	NA	NA	NA	NA	4
1252	8	7217291	7217291	A	G	intronic	ZNF705G	NA	NA	NA	intronic	ENSG00000215372	NA	NA	NA	NA	NA	8p23.1	NA	NA	NA	NA	rs56111220	NA	NA	0.328	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.99464	NA	NA	NA	NA	NA	0.188	NA	4
1252	8	59535860	59535860	T	A	intronic	NSMAF	NA	NA	NA	intronic	ENSG00000035681	NA	NA	NA	NA	NA	8q12.1	NA	NA	NA	NA	rs115290812	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.009092	NA	NA	NA	NA	NA	NA	NA	4
1252	8	69046228	69046228	G	T	intronic	PREX2	NA	NA	NA	intronic	ENSG00000046889	NA	NA	NA	NA	NA	8q13.2	NA	NA	NA	NA	rs113579494	0.0041	0.0041	0.003	0.00738818	NA	NA	0.0043	0.0257	NA	NA	NA	0.01	0.01	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.041029	NA	NA	NA	NA	NA	0.007	NA	4
1252	8	135620894	135620894	T	G	intronic	ZFAT	NA	NA	NA	intronic	ENSG00000066827	NA	NA	NA	NA	NA	8q24.22	NA	NA	NA	NA	rs3739421	0.41	0.41	0.358	NA	NA	NA	NA	NA	NA	0.34	0.55	0.5	0.28	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.691376	NA	NA	NA	NA	NA	0.188	NA	4
1252	9	33386284	33386284	T	G	intronic	AQP7	NA	NA	NA	intronic	ENSG00000165269	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs73478964	NA	NA	0.326	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.287057	NA	NA	NA	NA	NA	0.007	NA	4
1252	9	33386901	33386901	G	A	intronic	AQP7	NA	NA	NA	intronic	ENSG00000165269	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs71488925	NA	NA	0.021	0.000399361	NA	NA	NA	NA	0.002	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.171923	NA	NA	NA	NA	NA	NA	NA	4
1252	9	40332852	40332852	A	T	intergenic	FAM74A1,SPATA31A3	dist=425612;dist=367439	NA	NA	ncRNA_intronic	ENSG00000185020	NA	NA	NA	NA	NA	9p13.1	NA	NA	NA	NA	rs1692850	NA	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.480402	NA	NA	NA	NA	NA	0.217	NA	4
1252	9	65602551	65602551	C	T	intergenic	SPATA31A5,PTGER4P2-CDK2AP2P2	dist=92941;dist=891718	NA	NA	ncRNA_intronic	ENSG00000237792	NA	NA	NA	NA	NA	9q12	NA	NA	NA	NA	rs11265643	NA	NA	0.186	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.873384	NA	NA	NA	NA	NA	NA	NA	4
1252	9	66836744	66836744	G	A	intergenic	PTGER4P2-CDK2AP2P2,LOC286297	dist=333714;dist=180631	NA	NA	ncRNA_exonic	ENSG00000270092	NA	NA	NA	NA	NA	9q13	NA	NA	NA	NA	rs3892981	NA	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.216409	NA	NA	NA	NA	NA	0.145	NA	4
1252	9	68370810	68370810	C	T	intergenic	ANKRD20A3,LOC642236	dist=400517;dist=56973	NA	NA	ncRNA_exonic	ENSG00000226020	NA	NA	NA	NA	NA	9q13	NA	NA	NA	NA	rs74672293	NA	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.369468	NA	NA	NA	NA	NA	NA	NA	4
1252	9	100407567	100407567	C	A	intronic	NCBP1	NA	NA	NA	intronic	ENSG00000136937	NA	NA	NA	NA	NA	9q22.33	NA	NA	NA	NA	rs73498334	0.03	0.03	0.045	0.0469249	NA	NA	0.0202	0.1581	0.0123	NA	NA	0.01	0.14	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.504623	1.504623	NA	NA	NA	NA	0.036	NA	4
1252	9	133507530	133507530	G	T	intronic	FUBP3	NA	NA	NA	intronic	ENSG00000107164	NA	NA	NA	NA	NA	9q34.12	NA	NA	NA	NA	rs190578014	0.0005	0.0005	NA	0.000599042	NA	NA	0.0043	NA	NA	NA	NA	0.0028	NA	NA	0.0028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.474333	1.474333	NA	NA	NA	NA	NA	NA	4
1252	9	141035935	141035935	T	C	intergenic	CACNA1B,TUBBP5	dist=16859;dist=8630	NA	NA	ncRNA_exonic	ENSG00000229926	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs115489568	NA	NA	0.145	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.076	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.798844	NA	NA	NA	NA	NA	0.051	NA	4
1252	10	5324731	5324731	C	G	intergenic	AKR1C4,UCN3	dist=63821;dist=82245	NA	NA	ncRNA_intronic	ENSG00000215267	NA	NA	NA	NA	NA	10p15.1	NA	NA	NA	NA	rs75967546	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.497312	NA	NA	NA	NA	NA	NA	NA	4
1252	10	5324796	5324796	T	C	intergenic	AKR1C4,UCN3	dist=63886;dist=82180	NA	NA	ncRNA_exonic	ENSG00000215267	NA	NA	NA	NA	NA	10p15.1	NA	NA	NA	NA	rs74371453	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.054399	NA	NA	NA	NA	NA	NA	NA	4
1252	10	5324871	5324871	G	A	intergenic	AKR1C4,UCN3	dist=63961;dist=82105	NA	NA	ncRNA_intronic	ENSG00000215267	NA	NA	NA	NA	NA	10p15.1	NA	NA	NA	NA	rs78592374	NA	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.367754	NA	NA	NA	NA	NA	NA	NA	4
1252	10	5324876	5324876	A	T	intergenic	AKR1C4,UCN3	dist=63966;dist=82100	NA	NA	ncRNA_intronic	ENSG00000215267	NA	NA	NA	NA	NA	10p15.1	NA	NA	NA	NA	rs78756916	NA	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.662127	NA	NA	NA	NA	NA	NA	NA	4
1252	10	5324884	5324884	G	A	intergenic	AKR1C4,UCN3	dist=63974;dist=82092	NA	NA	ncRNA_intronic	ENSG00000215267	NA	NA	NA	NA	NA	10p15.1	NA	NA	NA	NA	rs199981968	NA	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.592726	NA	NA	NA	NA	NA	NA	NA	4
1252	10	12142284	12142284	C	T	intronic	DHTKD1	NA	NA	NA	intronic	ENSG00000181192	NA	NA	NA	NA	NA	10p14	NA	NA	NA	NA	rs9424146	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.810254	NA	NA	NA	NA	NA	NA	NA	4
1252	10	28270612	28270612	C	T	intronic	ARMC4	NA	NA	NA	intronic	ENSG00000169126	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs9334541	0.08	0.08	0.071	NA	NA	NA	NA	NA	NA	0.18	0.0017	0.09	0.01	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.55769	NA	NA	NA	NA	NA	0.022	NA	4
1252	10	30915637	30915637	A	G	intronic	LYZL2	NA	NA	NA	intronic	ENSG00000151033	NA	NA	NA	NA	NA	10p11.23	NA	NA	NA	NA	rs3864847	NA	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.202578	NA	NA	NA	NA	NA	0.007	NA	4
1252	10	30978282	30978282	G	T	intergenic	LYZL2,ZNF438	dist=59635;dist=155283	NA	NA	ncRNA_intronic	ENSG00000234814	NA	NA	NA	NA	NA	10p11.23	NA	NA	NA	NA	rs11008182	NA	NA	0.196	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.049078	NA	NA	NA	NA	NA	0.188	NA	4
1252	10	38897455	38897455	T	G	intergenic	LOC399744,ACTR3BP5	dist=156374;dist=92272	NA	NA	ncRNA_intronic	ENSG00000215151	NA	NA	NA	NA	NA	10p11.1	NA	NA	NA	NA	rs79077766	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.180227	NA	NA	NA	NA	NA	NA	NA	4
1252	10	38897463	38897463	C	T	intergenic	LOC399744,ACTR3BP5	dist=156382;dist=92264	NA	NA	ncRNA_intronic	ENSG00000215151	NA	NA	NA	NA	NA	10p11.1	NA	NA	NA	NA	rs76558209	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.318988	NA	NA	NA	NA	NA	NA	NA	4
1252	10	38897470	38897470	T	A	intergenic	LOC399744,ACTR3BP5	dist=156389;dist=92257	NA	NA	ncRNA_intronic	ENSG00000215151	NA	NA	NA	NA	NA	10p11.1	NA	NA	NA	NA	rs75885844	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.121482	NA	NA	NA	NA	NA	NA	NA	4
1252	10	38978099	38978099	T	C	intergenic	LOC399744,ACTR3BP5	dist=237018;dist=11628	NA	NA	ncRNA_intronic	ENSG00000233867	NA	NA	NA	NA	NA	10p11.1	NA	NA	NA	NA	rs61842167	NA	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.939278	NA	NA	NA	NA	NA	NA	NA	4
1252	10	99144843	99144843	G	A	intronic	RRP12	NA	NA	NA	intronic	ENSG00000052749	NA	NA	NA	NA	NA	10q24.1	NA	NA	NA	NA	rs114069199	0.08	0.08	0.12	NA	NA	NA	NA	NA	NA	0.06	0.04	0.09	0.17	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.711786	NA	NA	NA	NA	NA	NA	NA	4
1252	10	99144844	99144844	G	A	intronic	RRP12	NA	NA	NA	intronic	ENSG00000052749	NA	NA	NA	NA	NA	10q24.1	NA	NA	NA	NA	rs114633874	0.09	0.09	0.127	NA	NA	NA	NA	NA	NA	0.07	0.04	0.09	0.17	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.702044	NA	NA	NA	NA	NA	NA	NA	4
1252	10	100167466	100167466	G	A	intronic	PYROXD2	NA	NA	NA	intronic	ENSG00000119943	NA	NA	NA	NA	NA	10q24.2	NA	NA	NA	NA	rs12763379	0.36	0.36	0.304	NA	NA	NA	NA	NA	NA	0.23	0.44	0.35	0.48	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.819375	NA	NA	NA	NA	NA	0.065	NA	4
1252	10	112039931	112039931	T	C	intronic	MXI1	NA	NA	NA	intronic	ENSG00000119950	NA	NA	NA	NA	NA	10q25.2	NA	NA	NA	NA	rs192824024	0.0005	0.0005	NA	0.000399361	NA	NA	0.0014	NA	0.001	NA	NA	0.0028	NA	NA	0.0028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.290606	NA	NA	NA	NA	NA	NA	NA	4
1252	10	118368493	118368493	C	A	intronic	PNLIPRP1	NA	NA	NA	intronic	ENSG00000187021	NA	NA	NA	NA	NA	10q25.3	NA	NA	NA	NA	rs5003367	0.3	0.3	0.345	NA	NA	NA	NA	NA	NA	0.26	0.53	0.19	0.17	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.77607	NA	NA	NA	NA	NA	0.246	NA	4
1252	11	116703398	116703398	G	A	intronic	APOC3	NA	NA	NA	intronic	ENSG00000110245	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs12721084	0.01	0.01	0.006	0.0165735	NA	NA	0.013	0.056	NA	NA	NA	0.01	0.05	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.060705	NA	NA	NA	NA	NA	0.036	NA	4
1252	12	25957147	25957147	C	T	intergenic	IFLTD1,MIR4302	dist=155651;dist=69806	NA	NA	ncRNA_exonic	ENSG00000255725	NA	NA	NA	NA	NA	12p12.1	NA	NA	NA	NA	rs76082602	NA	NA	0.252	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.510157	NA	NA	NA	NA	NA	0.457	NA	4
1252	12	31242271	31242271	G	A	intronic	DDX11	NA	NA	NA	intronic	ENSG00000013573	NA	NA	NA	NA	NA	12p11.21	NA	NA	NA	NA	rs2005896	0.54	0.54	0.425	NA	NA	NA	NA	NA	NA	0.37	0.71	0.49	0.62	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.039148	NA	NA	NA	NA	NA	0.239	NA	4
1252	12	48376447	48376447	A	G	intronic	COL2A1	NA	NA	NA	intronic	ENSG00000139219	NA	NA	NA	NA	NA	12q13.11	NA	NA	NA	NA	rs3829737	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.600627	NA	NA	NA	NA	NA	NA	NA	4
1252	13	70535347	70535347	A	T	intronic	KLHL1	NA	NA	NA	intronic	ENSG00000150361	NA	NA	NA	NA	NA	13q21.33	NA	NA	NA	NA	rs41283976	0.1	0.1	NA	NA	NA	NA	NA	NA	NA	0.11	0.0017	0.15	0.15	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.992047	NA	NA	NA	NA	NA	0.08	NA	4
1252	14	19806700	19806700	A	G	intergenic	LINC00516,LINC00516	dist=125684;dist=87669	NA	NA	ncRNA_exonic	ENSG00000196143	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs4111007	NA	NA	0.254	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.387754	NA	NA	NA	NA	NA	0.007	NA	4
1252	14	19806717	19806717	A	C	intergenic	LINC00516,LINC00516	dist=125701;dist=87652	NA	NA	ncRNA_exonic	ENSG00000196143	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs1575832	NA	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.265519	NA	NA	NA	NA	NA	0.007	NA	4
1252	14	20265201	20265201	A	G	intergenic	OR4M1,OR4N2	dist=15778;dist=30407	NA	NA	ncRNA_exonic	ENSG00000258564	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs17276836	0.17	0.17	0.149	NA	NA	NA	NA	NA	NA	0.22	0.12	0.2	0.14	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.444046	NA	NA	NA	NA	NA	0.217	NA	4
1252	14	57511445	57511445	C	T	intergenic	OTX2-AS1,EXOC5	dist=113895;dist=157749	NA	NA	ncRNA_exonic	ENSG00000259136	NA	NA	NA	NA	NA	14q22.3	NA	NA	NA	NA	rs28396275	NA	NA	0.007	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.351234	NA	NA	NA	NA	NA	NA	NA	4
1252	14	74973583	74973583	C	T	intronic	LTBP2	NA	NA	NA	intronic	ENSG00000119681	NA	NA	NA	NA	NA	14q24.3	NA	NA	NA	NA	rs8020768	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.065	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.75723	NA	NA	NA	NA	NA	0.043	NA	4
1252	14	93282892	93282892	T	G	intronic	GOLGA5	NA	NA	NA	intronic	ENSG00000066455	NA	NA	NA	NA	NA	14q32.12	NA	NA	NA	NA	rs80139657	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.34806	NA	NA	NA	NA	NA	NA	NA	4
1252	14	106800503	106800503	T	C	intergenic	LINC00226,LINC00221	dist=55537;dist=137952	NA	NA	ncRNA_exonic	ENSG00000253587	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs34614028	NA	NA	0.159	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.076	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.643077	NA	NA	NA	NA	NA	0.065	NA	4
1252	14	106881353	106881353	T	G	intergenic	LINC00226,LINC00221	dist=136387;dist=57102	NA	NA	ncRNA_exonic	ENSG00000253467	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs75115381	NA	NA	0.153	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.385786	NA	NA	NA	NA	NA	NA	NA	4
1252	14	106881355	106881355	G	C	intergenic	LINC00226,LINC00221	dist=136389;dist=57100	NA	NA	ncRNA_exonic	ENSG00000253467	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs199725513	NA	NA	0.149	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.462114	NA	NA	NA	NA	NA	NA	NA	4
1252	14	106881452	106881452	T	C	intergenic	LINC00226,LINC00221	dist=136486;dist=57003	NA	NA	ncRNA_exonic	ENSG00000253467	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs74095122	0.27	0.27	0.25	NA	NA	NA	NA	NA	NA	0.27	0.17	0.22	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.318791	NA	NA	NA	NA	NA	0.239	NA	4
1252	14	106919301	106919301	T	C	intergenic	LINC00226,LINC00221	dist=174335;dist=19154	NA	NA	ncRNA_exonic	ENSG00000254228	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs73372473	0.26	0.26	0.26	NA	NA	NA	NA	NA	NA	0.27	0.14	0.18	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.354225	NA	NA	NA	NA	NA	0.254	NA	4
1252	14	106919382	106919382	T	C	intergenic	LINC00226,LINC00221	dist=174416;dist=19073	NA	NA	ncRNA_exonic	ENSG00000254228	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs73372475	NA	NA	0.259	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.237058	NA	NA	NA	NA	NA	0.145	NA	4
1252	14	106919428	106919428	G	A	intergenic	LINC00226,LINC00221	dist=174462;dist=19027	NA	NA	ncRNA_exonic	ENSG00000254228	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs74093719	0.27	0.27	0.241	NA	NA	NA	NA	NA	NA	0.28	0.17	0.21	0.44	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.19275	NA	NA	NA	NA	NA	0.094	NA	4
1252	14	106919435	106919435	C	T	intergenic	LINC00226,LINC00221	dist=174469;dist=19020	NA	NA	ncRNA_exonic	ENSG00000254228	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs74093722	0.27	0.27	0.242	NA	NA	NA	NA	NA	NA	0.28	0.17	0.21	0.44	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.196934	NA	NA	NA	NA	NA	0.094	NA	4
1252	14	106919483	106919483	C	T	intergenic	LINC00226,LINC00221	dist=174517;dist=18972	NA	NA	ncRNA_exonic	ENSG00000254228	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs73372477	0.25	0.25	0.216	NA	NA	NA	NA	NA	NA	0.27	0.17	0.2	0.34	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.390311	NA	NA	NA	NA	NA	0.036	NA	4
1252	14	107099190	107099190	G	T	intergenic	LINC00221,NONE	dist=147661;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000253132	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs2583295	NA	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.065	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.434877	NA	NA	NA	NA	NA	0.087	NA	4
1252	14	107099230	107099230	G	A	intergenic	LINC00221,NONE	dist=147701;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000253132	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs2904629	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.817018	NA	NA	NA	NA	NA	0.007	NA	4
1252	15	20084191	20084191	T	A	intergenic	NONE,CHEK2P2	dist=NONE;dist=403806	NA	NA	ncRNA_exonic	ENSG00000215567	NA	NA	NA	NA	NA	15q11.1	NA	NA	NA	NA	rs61998021	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.735104	NA	0.02	NA	NA	NA	0.297	NA	4
1252	15	20173213	20173213	G	A	intergenic	NONE,CHEK2P2	dist=NONE;dist=314784	NA	NA	ncRNA_exonic	ENSG00000258706	NA	NA	NA	NA	NA	15q11.1	NA	NA	NA	NA	rs73389313	NA	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.073476	NA	NA	NA	NA	NA	NA	NA	4
1252	15	20173245	20173245	T	C	intergenic	NONE,CHEK2P2	dist=NONE;dist=314752	NA	NA	ncRNA_exonic	ENSG00000258706	NA	NA	NA	NA	NA	15q11.1	NA	NA	NA	NA	rs75426745	NA	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.263459	NA	NA	NA	NA	NA	NA	NA	4
1252	15	20450014	20450014	G	A	intergenic	NONE,CHEK2P2	dist=NONE;dist=37983	NA	NA	ncRNA_intronic	ENSG00000258628	NA	NA	NA	NA	NA	15q11.1	NA	NA	NA	NA	rs2466363	NA	NA	0.416	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.233548	NA	NA	NA	NA	NA	0.486	NA	4
1252	15	20453913	20453913	C	T	intergenic	NONE,CHEK2P2	dist=NONE;dist=34084	NA	NA	ncRNA_exonic	ENSG00000258628	NA	NA	NA	NA	NA	15q11.1	NA	NA	NA	NA	rs2601516	NA	NA	0.334	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.095525	NA	NA	NA	NA	NA	0.116	NA	4
1252	15	20456828	20456828	G	A	intergenic	NONE,CHEK2P2	dist=NONE;dist=31169	NA	NA	ncRNA_intronic	ENSG00000258628	NA	NA	NA	NA	NA	15q11.1	NA	NA	NA	NA	rs56331633	NA	NA	0.048	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.959579	NA	NA	NA	NA	ID=COSN164849;OCCURENCE=1(breast)	NA	NA	4
1252	15	20467100	20467100	A	G	intergenic	NONE,CHEK2P2	dist=NONE;dist=20897	NA	NA	ncRNA_intronic	ENSG00000258628	NA	NA	NA	NA	NA	15q11.1	NA	NA	NA	NA	rs4983661	NA	NA	0.296	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.519621	NA	NA	NA	NA	NA	0.261	NA	4
1252	15	21137248	21137248	G	A	intergenic	NF1P2,CT60	dist=2623;dist=8519	NA	NA	ncRNA_intronic	ENSG00000270831	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs8023789	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.516582	NA	NA	NA	NA	NA	0.014	NA	4
1252	15	21902874	21902874	T	C	intergenic	CT60,LOC646214	dist=704241;dist=29640	NA	NA	ncRNA_intronic	ENSG00000258883	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs28642802	NA	NA	0.361	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.315092	NA	NA	NA	NA	NA	0.304	NA	4
1252	15	22148845	22148845	A	G	intergenic	NF1P2,LOC727924	dist=3043;dist=129187	NA	NA	ncRNA_intronic	ENSG00000258997	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs1841470	0.58	0.58	0.58	NA	NA	NA	NA	NA	NA	0.65	0.56	0.61	0.48	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.822099	NA	NA	NA	NA	NA	0.355	NA	4
1252	15	78272318	78272318	C	G	intergenic	LOC645752,LOC91450	dist=53130;dist=13257	NA	NA	ncRNA_exonic	ENSG00000261143	NA	NA	NA	NA	NA	15q24.3	NA	NA	NA	NA	rs12439777	0.4	0.4	0.237	NA	NA	NA	NA	NA	NA	0.36	0.56	0.42	0.24	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.014167	NA	NA	NA	NA	NA	NA	NA	4
1252	15	79026183	79026183	G	C	intergenic	CHRNB4,LOC646938	dist=92596;dist=18196	NA	NA	ncRNA_intronic	ENSG00000261303	NA	NA	NA	NA	NA	15q25.1	NA	NA	NA	NA	rs3971855	NA	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.153911	NA	NA	NA	NA	NA	0.014	NA	4
1252	15	80478374	80478374	C	T	intronic	FAH	NA	NA	NA	intronic	ENSG00000103876	NA	NA	NA	NA	NA	15q25.1	NA	NA	NA	NA	rs56793941	0.02	0.02	0.025	0.0283546	NA	NA	0.0029	0.1059	NA	NA	NA	0.0028	0.09	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.945436	NA	NA	NA	NA	NA	0.043	NA	4
1252	15	81575231	81575231	G	A	intronic	IL16	NA	NA	NA	intronic	ENSG00000172349	NA	NA	NA	NA	NA	15q25.1	NA	NA	NA	NA	rs115472777	0.01	0.01	0.013	0.0177716	NA	NA	0.0014	0.0666	NA	NA	NA	0.01	0.05	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.953444	NA	NA	NA	NA	NA	0.022	NA	4
1252	16	15082021	15082021	G	A	intronic	PDXDC1	NA	NA	NA	intronic	ENSG00000179889	NA	NA	NA	NA	NA	16p13.11	NA	NA	NA	NA	rs55973981	0.28	0.28	0.223	NA	NA	NA	NA	NA	NA	0.24	0.45	0.3	0.12	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.202992	NA	NA	NA	NA	NA	0.312	NA	4
1252	16	16459342	16459342	C	T	intergenic	PKD1P1,XYLT1	dist=14877;dist=736839	NA	NA	ncRNA_exonic	ENSG00000227827	NA	NA	NA	NA	NA	16p13.11	NA	NA	NA	NA	rs62032870	NA	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.361241	NA	NA	NA	NA	NA	NA	NA	4
1252	16	32403349	32403349	T	G	intergenic	LOC390705,TP53TG3	dist=102047;dist=281500	NA	NA	ncRNA_intronic	ENSG00000260866	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs12600022	NA	NA	0.197	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.065	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.124772	NA	NA	NA	NA	NA	0.065	NA	4
1252	16	32616275	32616275	C	G	intergenic	LOC390705,TP53TG3	dist=314973;dist=68574	NA	NA	ncRNA_exonic	ENSG00000259966	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs1505124	NA	NA	0.428	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.487349	NA	NA	NA	NA	NA	0.435	NA	4
1252	16	32621754	32621754	G	A	intergenic	LOC390705,TP53TG3	dist=320452;dist=63095	NA	NA	ncRNA_exonic	ENSG00000259966	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs2135086	NA	NA	0.401	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.300378	NA	NA	NA	NA	NA	0.435	NA	4
1252	16	32626312	32626312	C	T	intergenic	LOC390705,TP53TG3	dist=325010;dist=58537	NA	NA	ncRNA_exonic	ENSG00000259966	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs1827716	NA	NA	0.378	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.655282	NA	NA	NA	NA	NA	0.391	NA	4
1252	16	32823611	32823611	T	C	intergenic	TP53TG3,SLC6A10P	dist=136163;dist=65186	NA	NA	ncRNA_intronic	ENSG00000260158	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs62049069	NA	NA	0.174	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.549335	NA	NA	NA	NA	NA	NA	NA	4
1252	16	33371484	33371484	T	G	intergenic	LOC390705,RNU6-76P	dist=72782;dist=92023	NA	NA	ncRNA_intronic	ENSG00000261405	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs11643832	NA	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.359098	NA	NA	NA	NA	NA	0.283	NA	4
1252	16	33371537	33371537	T	G	intergenic	LOC390705,RNU6-76P	dist=72835;dist=91970	NA	NA	ncRNA_intronic	ENSG00000261405	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs1007145	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.799845	NA	NA	NA	NA	NA	0.486	NA	4
1252	16	33404815	33404815	A	C	intergenic	LOC390705,RNU6-76P	dist=106113;dist=58692	NA	NA	ncRNA_intronic	ENSG00000259882	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs7186202	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.087	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.284166	NA	NA	NA	NA	NA	0.065	NA	4
1252	16	33412679	33412679	G	A	intergenic	LOC390705,RNU6-76P	dist=113977;dist=50828	NA	NA	ncRNA_intronic	ENSG00000259882	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs4985254	NA	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.324349	1.324349	NA	NA	NA	NA	0.333	NA	4
1252	16	33412812	33412812	C	G	intergenic	LOC390705,RNU6-76P	dist=114110;dist=50695	NA	NA	ncRNA_exonic	ENSG00000259882	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs7403931	NA	NA	0.395	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.10559	NA	NA	NA	NA	NA	0.355	NA	4
1252	16	33413878	33413878	G	A	intergenic	LOC390705,RNU6-76P	dist=115176;dist=49629	NA	NA	ncRNA_intronic	ENSG00000259882	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs7184717	NA	NA	0.529	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.437479	NA	NA	NA	NA	NA	0.37	NA	4
1252	16	33413927	33413927	G	A	intergenic	LOC390705,RNU6-76P	dist=115225;dist=49580	NA	NA	ncRNA_intronic	ENSG00000259882	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs7184676	NA	NA	0.597	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.850302	NA	NA	NA	NA	NA	0.341	NA	4
1252	16	33413957	33413957	C	T	intergenic	LOC390705,RNU6-76P	dist=115255;dist=49550	NA	NA	ncRNA_intronic	ENSG00000259882	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs28392505	NA	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.813689	NA	NA	NA	NA	NA	0.341	NA	4
1252	16	33414214	33414214	C	G	intergenic	LOC390705,RNU6-76P	dist=115512;dist=49293	NA	NA	ncRNA_intronic	ENSG00000259882	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs12445102	NA	NA	0.561	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.245297	NA	NA	NA	NA	NA	0.355	NA	4
1252	16	33414234	33414234	C	T	intergenic	LOC390705,RNU6-76P	dist=115532;dist=49273	NA	NA	ncRNA_intronic	ENSG00000259882	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs12448077	NA	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.445321	NA	NA	NA	NA	NA	0.362	NA	4
1252	16	33414269	33414269	T	G	intergenic	LOC390705,RNU6-76P	dist=115567;dist=49238	NA	NA	ncRNA_intronic	ENSG00000259882	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs9926582	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.247674	NA	NA	NA	NA	NA	0.464	NA	4
1252	16	33414277	33414277	C	T	intergenic	LOC390705,RNU6-76P	dist=115575;dist=49230	NA	NA	ncRNA_intronic	ENSG00000259882	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs12448049	NA	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.27863	NA	NA	NA	NA	NA	0.464	NA	4
1252	16	33525974	33525974	G	A	ncRNA_intronic	RNU6-76P	NA	NA	NA	intergenic	ENSG00000260518,ENSG00000261580	dist=25003;dist=45914	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs28522853	NA	NA	0.376	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.799	NA	NA	NA	NA	NA	0.333	NA	4
1252	16	33526073	33526073	T	A	ncRNA_intronic	RNU6-76P	NA	NA	NA	intergenic	ENSG00000260518,ENSG00000261580	dist=25102;dist=45815	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs28630636	NA	NA	0.372	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.575891	NA	NA	NA	NA	NA	0.362	NA	4
1252	16	33526126	33526126	A	G	ncRNA_intronic	RNU6-76P	NA	NA	NA	intergenic	ENSG00000260518,ENSG00000261580	dist=25155;dist=45762	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs56077592	NA	NA	0.384	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.866103	NA	NA	NA	NA	NA	0.42	NA	4
1252	16	33527606	33527606	G	A	ncRNA_intronic	RNU6-76P	NA	NA	NA	intergenic	ENSG00000260518,ENSG00000261580	dist=26635;dist=44282	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs4115102	NA	NA	0.403	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.519065	NA	NA	NA	NA	NA	0.413	NA	4
1252	16	33527802	33527802	G	A	ncRNA_intronic	RNU6-76P	NA	NA	NA	intergenic	ENSG00000260518,ENSG00000261580	dist=26831;dist=44086	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs3843958	NA	NA	0.404	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.700739	NA	NA	NA	NA	NA	0.391	NA	4
1252	16	33544214	33544214	T	A	ncRNA_intronic	RNU6-76P	NA	NA	NA	intergenic	ENSG00000260518,ENSG00000261580	dist=43243;dist=27674	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs12162076	NA	NA	0.339	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.330943	NA	NA	NA	NA	NA	NA	NA	4
1252	16	33544216	33544216	T	A	ncRNA_intronic	RNU6-76P	NA	NA	NA	intergenic	ENSG00000260518,ENSG00000261580	dist=43245;dist=27672	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs12162077	NA	NA	0.333	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.754583	NA	NA	NA	NA	NA	NA	NA	4
1252	16	33544275	33544275	G	T	ncRNA_intronic	RNU6-76P	NA	NA	NA	intergenic	ENSG00000260518,ENSG00000261580	dist=43304;dist=27613	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs12162029	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.319749	NA	1	NA	NA	NA	NA	NA	4
1252	16	33547962	33547962	T	C	ncRNA_intronic	RNU6-76P	NA	NA	NA	intergenic	ENSG00000260518,ENSG00000261580	dist=46991;dist=23926	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs74596538	NA	NA	0.583	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.451697	1.451697	NA	NA	NA	NA	0.268	NA	4
1252	16	33547966	33547966	G	A	ncRNA_intronic	RNU6-76P	NA	NA	NA	intergenic	ENSG00000260518,ENSG00000261580	dist=46995;dist=23922	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs78448652	NA	NA	0.595	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.355802	1.355802	NA	NA	NA	NA	0.268	NA	4
1252	16	33548013	33548013	T	G	ncRNA_intronic	RNU6-76P	NA	NA	NA	intergenic	ENSG00000260518,ENSG00000261580	dist=47042;dist=23875	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs80024711	NA	NA	0.329	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.289841	NA	0.14	NA	NA	NA	NA	NA	4
1252	16	33548025	33548025	A	C	ncRNA_intronic	RNU6-76P	NA	NA	NA	intergenic	ENSG00000260518,ENSG00000261580	dist=47054;dist=23863	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs74768650	NA	NA	0.262	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.976731	NA	1	NA	NA	NA	NA	NA	4
1252	16	33548046	33548046	T	C	ncRNA_intronic	RNU6-76P	NA	NA	NA	intergenic	ENSG00000260518,ENSG00000261580	dist=47075;dist=23842	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs28449878	NA	NA	0.486	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.988483	NA	NA	NA	NA	NA	0.043	NA	4
1252	16	33548084	33548084	A	G	ncRNA_intronic	RNU6-76P	NA	NA	NA	intergenic	ENSG00000260518,ENSG00000261580	dist=47113;dist=23804	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs77515676	NA	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.644983	NA	NA	NA	NA	NA	0.007	NA	4
1252	16	33548091	33548091	G	A	ncRNA_intronic	RNU6-76P	NA	NA	NA	intergenic	ENSG00000260518,ENSG00000261580	dist=47120;dist=23797	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs79448546	NA	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.102236	NA	NA	NA	NA	NA	0.007	NA	4
1252	16	33548115	33548115	G	A	ncRNA_intronic	RNU6-76P	NA	NA	NA	intergenic	ENSG00000260518,ENSG00000261580	dist=47144;dist=23773	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs79602761	NA	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.478836	NA	NA	NA	NA	NA	0.007	NA	4
1252	16	70164248	70164248	T	C	intronic	PDPR	NA	NA	NA	intronic	ENSG00000090857	NA	NA	NA	NA	NA	16q22.1	NA	NA	NA	NA	rs7206450	NA	NA	0.305	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.054	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.796494	NA	NA	NA	NA	NA	0.043	NA	4
1252	16	70177618	70177618	G	A	intronic	PDPR	NA	NA	NA	intronic	ENSG00000090857	NA	NA	NA	NA	NA	16q22.1	NA	NA	NA	NA	rs7191901	NA	NA	0.244	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.811616	NA	NA	NA	NA	NA	0.326	NA	4
1252	16	80719086	80719086	G	C	intronic	CDYL2	NA	NA	NA	intronic	ENSG00000166446	NA	NA	NA	NA	NA	16q23.2	NA	NA	NA	NA	rs8047798	0.46	0.46	0.469	NA	NA	NA	NA	NA	NA	0.64	0.29	0.46	0.37	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.490399	NA	NA	NA	NA	NA	0.558	NA	4
1252	17	10258155	10258155	T	C	intronic	MYH13	NA	NA	NA	intronic	ENSG00000006788	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs5010940	NA	NA	NA	0.00439297	NA	NA	0.0014	0.0151	0.001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.648574	NA	NA	NA	NA	NA	NA	NA	4
1252	17	16745092	16745092	G	A	intergenic	KRT16P2,TNFRSF13B	dist=8945;dist=97306	NA	NA	ncRNA_exonic	ENSG00000131885	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs590673	0.9	0.9	0.873	NA	NA	NA	NA	NA	NA	0.84	0.98	0.91	0.91	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.591318	NA	NA	NA	NA	NA	NA	NA	4
1252	17	21201550	21201550	T	C	intronic	MAP2K3	NA	NA	NA	intronic	ENSG00000034152	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs8072228	NA	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.671047	NA	NA	NA	NA	NA	0.326	NA	4
1252	17	21201579	21201579	C	T	intronic	MAP2K3	NA	NA	NA	intronic	ENSG00000034152	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs11651154	NA	NA	0.335	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.81877	NA	NA	NA	NA	NA	0.196	NA	4
1252	17	21201851	21201851	A	G	intronic	MAP2K3	NA	NA	NA	intronic	ENSG00000034152	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs8072386	NA	NA	0.43	0.000599042	NA	NA	NA	0.0023	NA	NA	NA	NA	NA	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.484864	NA	NA	NA	NA	NA	0.457	NA	4
1252	17	21202102	21202102	C	T	intronic	MAP2K3	NA	NA	NA	intronic	ENSG00000034152	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs35701021	NA	NA	0.42	0.0061901	NA	0.006	NA	0.0189	NA	NA	NA	NA	NA	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.850181	NA	NA	NA	NA	NA	0.377	NA	4
1252	17	21204437	21204437	T	C	intronic	MAP2K3	NA	NA	NA	intronic	ENSG00000034152	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs76549047	NA	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.092705	NA	NA	NA	NA	NA	0.478	NA	4
1252	17	21204441	21204441	T	C	intronic	MAP2K3	NA	NA	NA	intronic	ENSG00000034152	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs78162711	NA	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.239629	NA	NA	NA	NA	NA	0.478	NA	4
1252	17	21205396	21205396	C	A	intronic	MAP2K3	NA	NA	NA	intronic	ENSG00000034152	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs75974715	NA	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.321337	NA	NA	NA	NA	NA	0.435	NA	4
1252	17	21206616	21206616	G	A	intronic	MAP2K3	NA	NA	NA	intronic	ENSG00000034152	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs57761454	NA	NA	NA	0.00239617	NA	NA	NA	0.0091	NA	NA	NA	NA	NA	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.694256	NA	NA	NA	NA	NA	0.42	NA	4
1252	17	21206635	21206635	T	A	intronic	MAP2K3	NA	NA	NA	intronic	ENSG00000034152	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs77285979	NA	NA	0.343	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.973894	NA	NA	NA	NA	NA	0.457	NA	4
1252	17	21206642	21206642	G	A	intronic	MAP2K3	NA	NA	NA	intronic	ENSG00000034152	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs59259996	NA	NA	0.334	0.00419329	NA	0.0179	NA	NA	0.0031	NA	NA	NA	NA	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.436643	NA	NA	NA	NA	NA	0.457	NA	4
1252	17	21207602	21207602	C	G	intronic	MAP2K3	NA	NA	NA	intronic	ENSG00000034152	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs55677712	NA	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.519711	NA	NA	NA	NA	NA	0.464	NA	4
1252	17	21207649	21207649	C	T	intronic	MAP2K3	NA	NA	NA	intronic	ENSG00000034152	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs56342308	NA	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.151272	NA	NA	NA	NA	NA	0.5	NA	4
1252	17	21217397	21217397	A	G	intronic	MAP2K3	NA	NA	NA	intronic	ENSG00000034152	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs1657685	NA	NA	0.43	0.00259585	NA	NA	NA	NA	0.0133	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.315069	NA	NA	NA	NA	NA	0.5	NA	4
1252	17	21217400	21217400	G	A	intronic	MAP2K3	NA	NA	NA	intronic	ENSG00000034152	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs1622401	NA	NA	0.43	0.00259585	NA	NA	NA	NA	0.0133	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.147933	NA	NA	NA	NA	NA	0.5	NA	4
1252	17	21312542	21312542	G	T	intronic	KCNJ12,KCNJ18	NA	NA	NA	intronic	ENSG00000184185	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs73979842	NA	NA	NA	0.00599042	NA	0.0228	0.0014	0.003	0.002	NA	NA	NA	NA	NA	0.087	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.858683	NA	NA	NA	NA	NA	0.094	NA	4
1252	17	21312562	21312562	G	A	intronic	KCNJ12,KCNJ18	NA	NA	NA	intronic	ENSG00000184185	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs73312149	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.571353	NA	NA	NA	NA	NA	0.065	NA	4
1252	17	21312585	21312585	G	A	intronic	KCNJ12,KCNJ18	NA	NA	NA	intronic	ENSG00000184185	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs1714900	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.098	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.446214	NA	NA	NA	NA	NA	0.072	NA	4
1252	17	21312609	21312609	A	T	intronic	KCNJ12,KCNJ18	NA	NA	NA	intronic	ENSG00000184185	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs1657720	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.067449	NA	NA	NA	NA	NA	0.152	NA	4
1252	17	21318588	21318588	C	G	intronic	KCNJ12,KCNJ18	NA	NA	NA	intronic	ENSG00000184185	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs77791524	NA	NA	0.154	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.138401	NA	NA	NA	NA	NA	NA	NA	4
1252	17	21544395	21544395	T	C	intergenic	C17orf51,FAM27L	dist=89454;dist=280975	NA	NA	ncRNA_intronic	ENSG00000265019	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs9674474	NA	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.329132	NA	NA	NA	NA	NA	0.123	NA	4
1252	17	44782279	44782279	C	G	intronic	NSF	NA	NA	NA	intronic	ENSG00000073969	NA	NA	NA	NA	NA	17q21.31	NA	NA	NA	NA	rs62074084	NA	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.872194	NA	NA	NA	NA	NA	0.014	NA	4
1252	17	45095092	45095092	G	A	intergenic	RPRML,CDC27	dist=38478;dist=100219	NA	NA	ncRNA_exonic	ENSG00000263142	NA	NA	NA	NA	NA	17q21.32	NA	NA	NA	NA	rs117595416	0.09	0.09	0.076	NA	NA	NA	NA	NA	NA	0.08	0.13	0.09	0.06	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.274139	NA	NA	NA	NA	NA	NA	NA	4
1252	17	62020572	62020572	C	G	intronic	SCN4A	NA	NA	NA	intronic	ENSG00000007314	NA	NA	NA	NA	NA	17q23.3	NA	NA	NA	NA	rs113825196	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.133358	NA	NA	NA	NA	NA	0.007	NA	4
1252	17	66145600	66145600	A	G	intergenic	LINC00674,LOC440461	dist=13530;dist=49201	NA	NA	ncRNA_intronic	ENSG00000267023	NA	NA	NA	NA	NA	17q24.2	NA	NA	NA	NA	rs7221552	0.04	0.04	0.029	0.047524	NA	0.001	0.0202	0.1672	0.002	NA	NA	0.03	0.14	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.610655	NA	NA	NA	NA	NA	0.109	NA	4
1252	17	66147505	66147505	C	A	intergenic	LINC00674,LOC440461	dist=15435;dist=47296	NA	NA	ncRNA_intronic	ENSG00000267023	NA	NA	NA	NA	NA	17q24.2	NA	NA	NA	NA	rs7210941	0.03	0.03	0.032	0.0441294	NA	NA	0.0159	0.1589	NA	NA	NA	0.03	0.13	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.048109	NA	NA	NA	NA	NA	0.109	NA	4
1252	17	76430004	76430004	A	G	intronic	DNAH17	NA	NA	NA	intronic	ENSG00000187775	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs7217888	0.33	0.33	0.117	NA	NA	NA	NA	NA	NA	0.3	0.4	0.36	0.29	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.0053	NA	NA	NA	NA	NA	0.029	NA	4
1252	17	77079755	77079755	C	T	intronic	ENGASE	NA	NA	NA	intronic	ENSG00000167280	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs2001248	0.08	0.08	NA	NA	NA	NA	NA	NA	NA	0.11	0.04	0.14	0.05	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.648018	NA	NA	NA	NA	NA	0.138	NA	4
1252	17	78674429	78674429	C	T	intronic	RPTOR	NA	NA	NA	intronic	ENSG00000141564	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs374521049	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.961354	NA	NA	NA	NA	NA	0.007	NA	4
1252	18	12976	12976	C	T	intergenic	NONE,ROCK1P1	dist=NONE;dist=96089	NA	NA	ncRNA_intronic	ENSG00000262352	NA	NA	NA	NA	NA	18p11.32	NA	NA	NA	NA	rs9966994	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.717628	NA	NA	NA	NA	NA	0.514	NA	4
1252	18	47563157	47563157	T	C	intronic	MYO5B	NA	NA	NA	intronic	ENSG00000167306	NA	NA	NA	NA	NA	18q21.1	NA	NA	NA	NA	rs73444770	0.01	0.01	0.009	0.00838658	NA	NA	0.0014	0.031	NA	NA	NA	0.0028	0.03	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.138451	NA	NA	NA	NA	NA	0.022	NA	4
1252	18	57136943	57136943	G	A	intronic	CCBE1	NA	NA	NA	intronic	ENSG00000183287	NA	NA	NA	NA	NA	18q21.32	NA	NA	NA	NA	rs650033	0.39	0.39	0.405	NA	NA	NA	NA	NA	NA	0.44	0.42	0.32	0.35	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.258621	NA	NA	NA	NA	NA	0.428	NA	4
1252	19	580841	580841	C	T	intronic	BSG	NA	NA	NA	intronic	ENSG00000172270	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs28992476	0.11	0.11	0.009	NA	NA	NA	NA	NA	NA	0.08	0.14	0.1	0.13	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.552182	NA	NA	NA	NA	NA	NA	NA	4
1252	19	9585077	9585077	C	A	intronic	ZNF560	NA	NA	NA	intronic	ENSG00000198028	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs6512167	0.04	0.04	0.042	0.0523163	NA	0.001	0.0115	0.1914	NA	NA	0.0017	0.01	0.18	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.215255	NA	NA	NA	NA	NA	0.123	NA	4
1252	19	15788996	15788996	G	A	intronic	CYP4F12	NA	NA	NA	intronic	ENSG00000186204	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs28523893	0.38	0.38	0.355	NA	NA	NA	NA	NA	NA	0.22	0.72	0.32	0.25	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.820441	NA	NA	NA	NA	NA	0.283	NA	4
1252	19	15789297	15789297	A	G	intronic	CYP4F12	NA	NA	NA	intronic	ENSG00000186204	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs34161514	0.08	0.08	0.058	NA	NA	NA	NA	NA	NA	0.12	0.05	0.12	0.02	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.467851	NA	NA	NA	NA	NA	0.101	NA	4
1252	19	20211423	20211423	G	C	intronic	ZNF90	NA	NA	NA	intronic	ENSG00000213988	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs7249965	0.11	0.11	0.103	NA	NA	NA	NA	NA	NA	0.02	0.24	0.11	0.11	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.735663	NA	NA	NA	NA	NA	0.094	NA	4
1252	19	21749327	21749327	A	T	intergenic	ZNF429,ZNF100	dist=28248;dist=157516	NA	NA	ncRNA_intronic	ENSG00000268081	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs73025825	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.748794	NA	NA	NA	NA	NA	0.007	NA	4
1252	19	21749356	21749356	A	G	intergenic	ZNF429,ZNF100	dist=28277;dist=157487	NA	NA	ncRNA_intronic	ENSG00000268081	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs79693354	NA	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.865058	NA	NA	NA	NA	NA	0.007	NA	4
1252	19	21749413	21749413	T	C	intergenic	ZNF429,ZNF100	dist=28334;dist=157430	NA	NA	ncRNA_intronic	ENSG00000268081	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs76595644	NA	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.670455	NA	NA	NA	NA	NA	NA	NA	4
1252	19	21749416	21749416	C	G	intergenic	ZNF429,ZNF100	dist=28337;dist=157427	NA	NA	ncRNA_intronic	ENSG00000268081	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs75172356	NA	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.615558	NA	NA	NA	NA	NA	NA	NA	4
1252	19	21749427	21749427	T	G	intergenic	ZNF429,ZNF100	dist=28348;dist=157416	NA	NA	ncRNA_intronic	ENSG00000268081	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs115270210	NA	NA	0.15	0.000199681	NA	NA	NA	0.0008	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.637154	NA	NA	NA	NA	NA	NA	NA	4
1252	19	21749435	21749435	T	C	intergenic	ZNF429,ZNF100	dist=28356;dist=157408	NA	NA	ncRNA_intronic	ENSG00000268081	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs76862498	NA	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.795969	NA	NA	NA	NA	NA	NA	NA	4
1252	19	21749529	21749529	T	C	intergenic	ZNF429,ZNF100	dist=28450;dist=157314	NA	NA	ncRNA_intronic	ENSG00000268081	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs76013465	NA	NA	0.134	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.61171	NA	NA	NA	NA	NA	NA	NA	4
1252	19	21751847	21751847	G	C	intergenic	ZNF429,ZNF100	dist=30768;dist=154996	NA	NA	ncRNA_intronic	ENSG00000268081	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs73025873	NA	NA	0.156	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.946484	NA	NA	NA	NA	NA	NA	NA	4
1252	19	22255499	22255499	A	G	intronic	ZNF257	NA	NA	NA	intronic	ENSG00000197134	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs114737094	0.02	0.02	0.017	0.0181709	NA	NA	0.0043	0.0666	NA	NA	NA	0.01	0.07	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.669489	NA	NA	NA	NA	NA	0.022	NA	4
1252	19	43439332	43439332	C	T	intronic	PSG7	NA	NA	NA	intronic	ENSG00000221878	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs112589203	NA	NA	0.222	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.611201	NA	NA	NA	NA	NA	NA	NA	4
1252	19	43439363	43439363	G	C	intronic	PSG7	NA	NA	NA	intronic	ENSG00000221878	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs73037507	NA	NA	0.243	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.420248	NA	NA	NA	NA	NA	NA	NA	4
1252	19	43439364	43439364	G	A	intronic	PSG7	NA	NA	NA	intronic	ENSG00000221878	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs73037508	NA	NA	0.239	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.474442	NA	NA	NA	NA	NA	NA	NA	4
1252	19	49671089	49671089	C	T	intronic	TRPM4	NA	NA	NA	intronic	ENSG00000130529	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs71352733	0.24	0.24	0.11	NA	NA	NA	NA	NA	NA	0.28	0.19	0.23	0.23	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.940431	NA	NA	NA	NA	NA	0.014	NA	4
1252	19	49691822	49691822	T	C	intronic	TRPM4	NA	NA	NA	intronic	ENSG00000130529	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs909010	0.33	0.33	0.298	NA	NA	NA	NA	NA	NA	0.32	0.22	0.32	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.578066	NA	NA	NA	NA	NA	0.348	NA	4
1252	19	53050993	53050993	T	G	intronic	ZNF808	NA	NA	NA	intronic	ENSG00000198482	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs73934558	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.098	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.56148	NA	NA	NA	NA	NA	0.138	NA	4
1252	19	55209195	55209195	C	A	intergenic	LILRB4,LILRP2	dist=29349;dist=10406	NA	NA	ncRNA_exonic	ENSG00000186152	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs16985866	NA	NA	0.165	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.08854	NA	NA	NA	NA	NA	NA	NA	4
1252	20	2596969	2596969	T	A	intronic	TMC2	NA	NA	NA	intronic	ENSG00000149488	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs4621228	0.57	0.57	0.555	NA	NA	NA	NA	NA	NA	0.65	0.56	0.64	0.4	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.258548	NA	NA	NA	NA	NA	0.449	NA	4
1252	20	42747091	42747091	G	T	intronic	JPH2	NA	NA	NA	intronic	ENSG00000149596	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs144721330	0.0009	0.0009	0.001	0.00159744	NA	NA	0.0043	NA	0.0051	NA	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.822326	NA	NA	NA	NA	NA	NA	NA	4
1252	21	10899813	10899813	A	T	intergenic	TEKT4P2,TPTE	dist=931220;dist=6930	NA	NA	ncRNA_intronic	ENSG00000223925	NA	NA	NA	NA	NA	21p11.2	NA	NA	NA	NA	rs28440964	NA	NA	0.678	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.283652	NA	NA	NA	NA	NA	0.594	NA	4
1252	21	10908767	10908767	C	T	intronic	TPTE	NA	NA	NA	intronic	ENSG00000166157	NA	NA	NA	NA	NA	21p11.1	NA	NA	NA	NA	rs4913632	NA	NA	0.149	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.016691	NA	NA	NA	NA	NA	0.152	NA	4
1252	21	10935116	10935116	T	G	intronic	TPTE	NA	NA	NA	intronic	ENSG00000166157	NA	NA	NA	NA	NA	21p11.1	NA	NA	NA	NA	rs625018	NA	NA	0.418	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.486165	NA	NA	NA	NA	NA	0.304	NA	4
1252	21	11180808	11180808	T	C	intergenic	BAGE,NONE	dist=81871;dist=NONE	NA	NA	ncRNA_intronic	ENSG00000271308	NA	NA	NA	NA	NA	21p11.1	NA	NA	NA	NA	rs1963737	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.291389	NA	NA	NA	NA	NA	0.435	NA	4
1252	21	38469017	38469017	T	G	intronic	TTC3	NA	NA	NA	intronic	ENSG00000182670	NA	NA	NA	NA	NA	21q22.13	NA	NA	NA	NA	rs2835601	0.42	0.42	0.43	NA	NA	NA	NA	NA	NA	0.53	0.36	0.4	0.36	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.608957	1.608957	NA	NA	NA	NA	0.333	NA	4
1252	21	43999749	43999749	G	A	intronic	SLC37A1	NA	NA	NA	intronic	ENSG00000160190	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs8128696	0.02	0.02	0.023	0.0233626	NA	NA	0.0072	0.0847	NA	NA	NA	0.01	0.09	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.570667	NA	NA	NA	NA	NA	0.022	NA	4
1252	22	16350323	16350323	T	C	intergenic	POTEH,OR11H1	dist=62386;dist=98501	NA	NA	ncRNA_intronic	ENSG00000224435	NA	NA	NA	NA	NA	22q11.1	NA	NA	NA	NA	rs2188785	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.098877	NA	NA	NA	NA	NA	0.297	NA	4
1252	22	16350350	16350350	G	A	intergenic	POTEH,OR11H1	dist=62413;dist=98474	NA	NA	ncRNA_intronic	ENSG00000224435	NA	NA	NA	NA	NA	22q11.1	NA	NA	NA	NA	rs368298595	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.676063	NA	NA	NA	NA	NA	0.014	NA	4
1252	22	16350425	16350425	C	T	intergenic	POTEH,OR11H1	dist=62488;dist=98399	NA	NA	ncRNA_intronic	ENSG00000224435	NA	NA	NA	NA	NA	22q11.1	NA	NA	NA	NA	rs2188786	NA	NA	0.544	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.61773	NA	NA	NA	NA	NA	0.029	NA	4
1252	22	16868619	16868619	G	C	intergenic	OR11H1,CCT8L2	dist=418815;dist=203029	NA	NA	ncRNA_intronic	ENSG00000225293	NA	NA	NA	NA	NA	22q11.1	NA	NA	NA	NA	rs62223287	NA	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.76805	NA	NA	NA	NA	NA	NA	NA	4
1252	22	17586614	17586614	G	C	intronic	IL17RA	NA	NA	NA	intronic	ENSG00000177663	NA	NA	NA	NA	NA	22q11.1	NA	NA	NA	NA	rs35078252	NA	NA	NA	0.000998403	NA	0.001	NA	0.0023	0.001	NA	NA	NA	NA	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.013073	NA	NA	NA	NA	NA	0.471	NA	4
1252	22	20473206	20473206	C	T	intergenic	RIMBP3,ZNF74	dist=11420;dist=275199	NA	NA	ncRNA_exonic	ENSG00000236984	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs2551550	0.73	0.73	0.693	NA	NA	NA	NA	NA	NA	0.77	0.79	0.79	0.54	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.082076	NA	NA	NA	NA	NA	0.051	NA	4
1252	22	20473225	20473225	T	C	intergenic	RIMBP3,ZNF74	dist=11439;dist=275180	NA	NA	ncRNA_exonic	ENSG00000236984	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs2845429	0.73	0.73	0.678	NA	NA	NA	NA	NA	NA	0.77	0.8	0.79	0.52	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.126983	NA	NA	NA	NA	NA	0.051	NA	4
1252	22	21344032	21344032	C	T	intronic	LZTR1	NA	NA	NA	intronic	ENSG00000099949	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs7410559	0.44	0.44	0.44	NA	NA	NA	NA	NA	NA	0.49	0.4	0.48	0.4	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.788529	NA	NA	NA	NA	NA	0.08	NA	4
1252	22	50959796	50959796	A	T	intronic	NCAPH2	NA	NA	NA	intronic	ENSG00000025770	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs56228847	0.29	0.29	0.19	NA	NA	NA	NA	NA	NA	0.29	0.34	0.26	0.25	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.851409	NA	NA	NA	NA	NA	NA	NA	4
1252	X	205300	205300	C	T	intronic	PLCXD1	NA	NA	NA	intronic	ENSG00000182378	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs6644969	0.41	0.41	0.41176	NA	NA	NA	NA	NA	NA	0.49	0.58	0.41	0.06	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.833664	NA	NA	NA	NA	NA	0.326	NA	4
1252	X	301402	301402	T	A	intronic	PPP2R3B	NA	NA	NA	intronic	ENSG00000167393	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs2738367	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.335834	NA	NA	NA	NA	NA	0.007	NA	4
1252	X	301796	301796	G	A	intronic	PPP2R3B	NA	NA	NA	intronic	ENSG00000167393	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs111876222	0.24	0.24	0.2194	NA	NA	NA	NA	NA	NA	0.31	0.23	0.24	0.16	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.670535	NA	NA	NA	NA	NA	0.029	NA	4
1252	X	301912	301912	G	A	intronic	PPP2R3B	NA	NA	NA	intronic	ENSG00000167393	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs188531073	0.03	0.03	NA	NA	NA	NA	NA	NA	NA	0.0013	0.01	0.02	0.11	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.856461	NA	NA	NA	NA	NA	NA	NA	4
1252	X	302533	302533	A	G	intronic	PPP2R3B	NA	NA	NA	intronic	ENSG00000167393	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs6603234	0.36	0.36	0.3593	NA	NA	NA	NA	NA	NA	0.32	0.4	0.28	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.647648	NA	NA	NA	NA	NA	0.348	NA	4
1252	X	322386	322386	C	T	intronic	PPP2R3B	NA	NA	NA	intronic	ENSG00000167393	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs28713649	0.26	0.26	0.28935	NA	NA	NA	NA	NA	NA	0.35	0.22	0.28	0.16	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.612429	NA	NA	NA	NA	NA	0.254	NA	4
1252	X	484552	484552	C	T	intergenic	PPP2R3B,SHOX	dist=136862;dist=100527	NA	NA	ncRNA_exonic	ENSG00000234958	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs5950734	0.58	0.58	0.56836	NA	NA	NA	NA	NA	NA	0.5	0.98	0.59	0.25	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.869695	NA	NA	NA	NA	NA	0.442	NA	4
1252	X	1404910	1404910	C	A	intronic	CSF2RA	NA	NA	NA	intronic	ENSG00000198223	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs28521253	0.36	0.36	0.20668	NA	NA	NA	NA	NA	NA	0.41	0.35	0.39	0.27	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.982706	NA	NA	NA	NA	NA	0.304	NA	4
1252	X	1404964	1404964	A	G	intronic	CSF2RA	NA	NA	NA	intronic	ENSG00000198223	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs28505671	0.53	0.53	0.43005	NA	NA	NA	NA	NA	NA	0.53	0.36	0.52	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.743683	NA	NA	NA	NA	NA	0.551	NA	4
1252	X	1407273	1407273	G	A	intronic	CSF2RA	NA	NA	NA	intronic	ENSG00000198223	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs34442542	0.24	0.24	0.21781	NA	NA	NA	NA	NA	NA	0.25	0.31	0.33	0.08	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.802436	NA	NA	NA	NA	NA	0.188	NA	4
1252	X	1407281	1407281	G	A	intronic	CSF2RA	NA	NA	NA	intronic	ENSG00000198223	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs35118829	0.44	0.44	0.2186	NA	NA	NA	NA	NA	NA	0.48	0.55	0.61	0.1	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.014362	NA	NA	NA	NA	NA	0.362	NA	4
1252	X	1407332	1407332	G	A	intronic	CSF2RA	NA	NA	NA	intronic	ENSG00000198223	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs77140452	0.21	0.21	NA	NA	NA	NA	NA	NA	NA	0.22	0.31	0.27	0.01	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.877203	NA	NA	NA	NA	NA	NA	NA	4
1252	X	1414225	1414225	C	T	intronic	CSF2RA	NA	NA	NA	intronic	ENSG00000198223	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs28694718	0.28	0.28	NA	NA	NA	NA	NA	NA	NA	0.36	0.21	0.22	0.27	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.066	NA	NA	NA	NA	NA	0.203	NA	4
1252	X	1467219	1467219	G	C	intronic	IL3RA	NA	NA	NA	intronic	ENSG00000185291	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs17885427	0.57	0.57	0.52544	NA	NA	NA	NA	NA	NA	0.57	0.62	0.49	0.56	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.028773	NA	NA	NA	NA	NA	0.514	NA	4
1252	X	1718008	1718008	T	G	intronic	AKAP17A,ASMT	NA	NA	NA	intronic	ENSG00000197976	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs28513563	0.73	0.73	0.75755	NA	NA	NA	NA	NA	NA	0.7	0.64	0.62	0.97	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.722404	NA	NA	NA	NA	NA	0.812	NA	4
1252	X	2832871	2832871	A	G	intronic	ARSD	NA	NA	NA	intronic	ENSG00000006756	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs115343387	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.008803	NA	NA	NA	NA	NA	NA	NA	4
1252	Y	3720277	3720277	T	G	intergenic	TGIF2LY,PCDH11Y	dist=272195;dist=1147990	NA	NA	ncRNA_exonic	ENSG00000218410	NA	NA	NA	NA	NA	Yp11.2	NA	NA	NA	NA	rs7067239	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.343277	NA	NA	NA	NA	NA	NA	NA	4
1252	Y	3720302	3720302	G	A	intergenic	TGIF2LY,PCDH11Y	dist=272220;dist=1147965	NA	NA	ncRNA_exonic	ENSG00000218410	NA	NA	NA	NA	NA	Yp11.2	NA	NA	NA	NA	rs6530622	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.699965	NA	NA	NA	NA	NA	NA	NA	4
1252	Y	3720319	3720319	A	C	intergenic	TGIF2LY,PCDH11Y	dist=272237;dist=1147948	NA	NA	ncRNA_exonic	ENSG00000218410	NA	NA	NA	NA	NA	Yp11.2	NA	NA	NA	NA	rs7067364	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.630541	NA	NA	NA	NA	NA	NA	NA	4
1252	Y	3720336	3720336	G	A	intergenic	TGIF2LY,PCDH11Y	dist=272254;dist=1147931	NA	NA	ncRNA_exonic	ENSG00000218410	NA	NA	NA	NA	NA	Yp11.2	NA	NA	NA	NA	rs35660147	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.749781	NA	NA	NA	NA	NA	0.007	NA	4
1252	Y	3720463	3720463	G	A	intergenic	TGIF2LY,PCDH11Y	dist=272381;dist=1147804	NA	NA	ncRNA_exonic	ENSG00000218410	NA	NA	NA	NA	NA	Yp11.2	NA	NA	NA	NA	rs7892911	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.762292	NA	NA	NA	NA	NA	NA	NA	4
1252	Y	3720464	3720464	C	A	intergenic	TGIF2LY,PCDH11Y	dist=272382;dist=1147803	NA	NA	ncRNA_exonic	ENSG00000218410	NA	NA	NA	NA	NA	Yp11.2	NA	NA	NA	NA	rs7892879	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.818508	NA	NA	NA	NA	NA	NA	NA	4
1252	Y	13488484	13488484	T	G	intergenic	NONE,GYG2P1	dist=NONE;dist=1029431	NA	NA	ncRNA_exonic	ENSG00000258991	NA	NA	NA	NA	NA	Yq11.21	NA	NA	NA	NA	rs80099444	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.337087	NA	NA	NA	NA	NA	NA	NA	4
1252	17	78971155	78971155	C	A	intronic	CHMP6	NA	NA	NA	intronic	ENSG00000176108	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs199925280	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00001201	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.797141	NA	NA	NA	NA	NA	NA	NA	3.999988
1252	12	121164787	121164787	C	T	intronic	ACADS	NA	NA	NA	intronic	ENSG00000122971	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs200365221	0.0005	0.0005	NA	0.000199681	NA	NA	0.0014	NA	NA	NA	NA	0.0028	NA	0.00004947	0.0028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.465849	NA	NA	NA	NA	NA	NA	NA	3.9999505
1252	2	50733595	50733595	G	A	intronic	NRXN1	NA	NA	NA	intronic	ENSG00000179915	NA	NA	NA	NA	NA	2p16.3	NA	NA	NA	NA	rs200210892	0.0009	0.0009	NA	0.000199681	NA	NA	NA	0.0008	NA	NA	NA	0.0028	0.002	0.00005447	0.0028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.322304	NA	NA	NA	NA	NA	NA	NA	3.9999455
1252	11	103182795	103182795	G	A	intronic	DYNC2H1	NA	NA	NA	intronic	ENSG00000187240	NA	NA	NA	NA	NA	11q22.3	NA	NA	NA	NA	rs200658596	0.0005	0.0005	NA	0.000199681	NA	NA	0.0014	NA	NA	NA	NA	0.0028	NA	0.00008316	0.0028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.448944	NA	NA	NA	NA	NA	NA	NA	3.9999168
1252	19	1399089	1399089	G	A	intronic	GAMT	NA	NA	NA	intronic	ENSG00000130005	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs369176910	NA	NA	NA	0.000199681	NA	NA	NA	0.0008	NA	NA	NA	NA	NA	0.00009124	0.0007	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.879688	1.879688	NA	0	0.000681	NA	NA	NA	3.9999088
1252	2	46609271	46609271	G	A	intronic	EPAS1	NA	NA	NA	intronic	ENSG00000116016	NA	NA	NA	NA	NA	2p21	NA	NA	NA	NA	rs368248400	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00001037	0.0001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.819034	NA	NA	0.000116	0	NA	NA	NA	3.9998736
1252	2	54040050	54040050	A	G	intronic	ERLEC1,GPR75-ASB3	NA	NA	NA	intronic	ENSG00000068912,ENSG00000115239,ENSG00000270898	NA	NA	NA	NA	NA	2p16.2	NA	NA	NA	NA	rs371472899	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00001664	0.0001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.65668	3.65668	NA	0.000116	0	NA	NA	NA	3.9998674
1252	11	103124218	103124218	A	G	intronic	DYNC2H1	NA	NA	NA	intronic	ENSG00000187240	NA	NA	NA	NA	NA	11q22.3	NA	NA	NA	NA	rs369158021	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0000506	0.0001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.132908	NA	NA	0.000123	0	NA	NA	NA	3.9998264
1252	3	33416741	33416741	G	C	intronic	FBXL2	NA	NA	NA	intronic	ENSG00000153558	NA	NA	NA	NA	NA	3p22.3	NA	NA	NA	NA	rs193175351	0.0005	0.0005	NA	0.000399361	NA	NA	0.0029	NA	NA	NA	NA	0.0028	NA	0.0002	0.0028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.149869	NA	NA	NA	NA	NA	NA	NA	3.9998
1252	3	75986719	75986719	G	C	intergenic	ZNF717,ROBO2	dist=152464;dist=1102575	NA	NA	exonic	ENSG00000185008	NA	synonymous SNV	ENSG00000185008:ENST00000487694:exon2:c.G75C:p.V25V,ENSG00000185008:ENST00000602589:exon2:c.G75C:p.V25V	NA	NA	3p12.3	NA	NA	NA	NA	rs62269818	NA	NA	0.273	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5002	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.420247	NA	NA	NA	NA	NA	NA	NA	3.9998
1252	11	6478494	6478494	C	T	intronic	TRIM3	NA	NA	NA	intronic	ENSG00000110171	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs200144942	0.0005	0.0005	NA	0.000199681	NA	0.001	NA	NA	NA	NA	0.0017	NA	NA	0.0002	0.0017	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-3.102909	NA	NA	0	0.00159	NA	NA	NA	3.9998
1252	2	219693329	219693329	G	A	intronic	PRKAG3	NA	NA	NA	intronic	ENSG00000115592	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs376723919	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0001	0.0001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.044771	NA	NA	0.000116	0	NA	NA	NA	3.999784
1252	7	38805296	38805296	A	G	intronic	VPS41	NA	NA	NA	intronic	ENSG00000006715	NA	NA	NA	NA	NA	7p14.1	NA	NA	NA	NA	rs375513598	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0001	0.0001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.609116	NA	NA	0.000116	0	NA	NA	NA	3.999784
1252	17	4648256	4648256	C	A	intronic	ZMYND15	NA	NA	NA	intronic	ENSG00000141497	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs368393785	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0001	0.0001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.638384	NA	NA	0.000116	0	NA	NA	NA	3.999784
1252	11	102592080	102592080	T	A	intronic	MMP8	NA	NA	NA	intronic	ENSG00000118113	NA	NA	NA	NA	NA	11q22.2	NA	NA	NA	NA	rs187310211	0.0005	0.0005	NA	0.000199681	NA	NA	0.0014	NA	NA	NA	NA	0.0028	NA	NA	0.0028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.86703	NA	NA	0.000251	0.001142	NA	NA	NA	3.999749
1252	4	24875267	24875267	T	C	intronic	CCDC149	NA	NA	NA	intronic	ENSG00000181982	NA	NA	NA	NA	NA	4p15.2	NA	NA	NA	NA	rs374502897	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0001	0.0002	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.082073	NA	NA	0.000233	0	NA	NA	NA	3.999667
1252	19	33390924	33390924	G	A	intronic	CEP89	NA	NA	NA	intronic	ENSG00000121289	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs188560001	0.0023	0.0023	NA	0.00199681	NA	NA	NA	0.0076	NA	NA	NA	NA	0.01	0.0004	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.10036	NA	NA	0	0.004312	NA	NA	NA	3.9996
1252	17	4457281	4457281	C	A	intronic	MYBBP1A	NA	NA	NA	intronic	ENSG00000132382	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs370871554	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0003	0.0002	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.208105	NA	NA	0.000116	0.000227	NA	NA	NA	3.999584
1252	18	47109922	47109922	G	C	intronic	LIPG	NA	NA	NA	intronic	ENSG00000101670	NA	NA	NA	NA	NA	18q21.1	NA	NA	NA	NA	rs374219453	NA	NA	NA	0.000798722	NA	NA	NA	0.003	NA	NA	NA	NA	NA	0.0003	0.0018	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.99652	NA	NA	0.000116	0.001816	NA	NA	NA	3.999584
1252	1	157516713	157516713	C	T	intronic	FCRL5	NA	NA	NA	intronic	ENSG00000143297	NA	NA	NA	NA	NA	1q23.1	NA	NA	NA	NA	rs199512022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0002	0.0002	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.897195	NA	NA	0.000233	0	NA	NA	NA	3.999567
1252	4	38696578	38696578	A	G	intronic	KLF3	NA	NA	NA	intronic	ENSG00000109787	NA	NA	NA	NA	NA	4p14	NA	NA	NA	NA	rs369070711	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0002	0.0002	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.835256	NA	NA	0.000233	0	NA	NA	NA	3.999567
1252	9	140477419	140477419	A	G	intronic	ZMYND19	NA	NA	NA	intronic	ENSG00000165724	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs369697069	NA	NA	NA	0.000399361	NA	NA	NA	0.0015	NA	NA	NA	NA	NA	0.0002	0.0002	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.675134	NA	NA	0.000233	0.000227	NA	NA	NA	3.999567
1252	10	85910667	85910667	C	T	intronic	GHITM	NA	NA	NA	intronic	ENSG00000165678	NA	NA	NA	NA	NA	10q23.1	NA	NA	NA	NA	rs373815298	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0001	0.0004	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.43435	NA	NA	0.000366	0	NA	NA	NA	3.999534
1252	18	46956617	46956617	T	A	intronic	DYM	NA	NA	NA	intronic	ENSG00000141627	NA	NA	NA	NA	NA	18q21.1	NA	NA	NA	NA	rs199833534	0.0005	0.0005	NA	0.000798722	NA	NA	NA	0.003	NA	NA	NA	NA	0.002	0.0005	0.0036	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.029744	2.029744	NA	0	0.003631	NA	NA	NA	3.9995
1252	19	3113495	3113495	G	A	intronic	GNA11	NA	NA	NA	intronic	ENSG00000088256	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs371755659	NA	NA	NA	0.000199681	NA	NA	NA	NA	0.001	NA	NA	NA	NA	0.0001	0.0005	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.031135	NA	NA	0.000466	0	NA	NA	NA	3.999434
1252	12	58009202	58009202	T	C	intronic	ARHGEF25	NA	NA	NA	ncRNA_exonic	ENSG00000224713	NA	NA	NA	NA	NA	12q13.3	NA	NA	NA	NA	rs2277322	0.43	0.43	0.415	0.432109	0.334	0.5754	0.3703	0.3389	0.5552	0.35	0.64	0.35	0.39	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.104738	NA	NA	NA	NA	NA	0.413	NA	3.9993333
1252	17	10317125	10317125	G	A	intronic	MYH8	NA	NA	NA	ncRNA_intronic	ENSG00000214970	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs11078845	0.49	0.49	0.476	0.510383	0.334	0.876	0.4827	0.2731	0.6554	0.34	0.88	0.48	0.26	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.825088	NA	NA	NA	NA	NA	0.493	NA	3.9993333
1252	11	65413668	65413668	G	A	intronic	SIPA1	NA	NA	NA	intronic	ENSG00000213445	NA	NA	NA	NA	NA	11q13.1	NA	NA	NA	NA	rs201900465	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0001	0.0006	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.160048	NA	NA	0.000582	0	NA	NA	NA	3.999318
1252	6	100898119	100898119	G	A	intronic	SIM1	NA	NA	NA	intronic	ENSG00000112246	NA	NA	NA	NA	NA	6q16.3	NA	NA	NA	NA	rs72939629	0.0009	0.0009	NA	0.00139776	NA	NA	NA	0.0053	NA	NA	NA	NA	0.0041	0.0005	0.0041	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.327401	NA	NA	0.000233	0.002497	NA	0.007	NA	3.999267
1252	11	117052513	117052513	C	T	intronic	SIDT2	NA	NA	NA	intronic	ENSG00000149577	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs183950705	0.0027	0.0027	NA	0.00159744	NA	NA	0.0043	0.0038	NA	NA	NA	0.01	0.01	0.0006	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.545536	NA	NA	0.000233	0.004543	NA	0.007	NA	3.999167
1252	20	44463550	44463550	T	A	intronic	SNX21	NA	NA	NA	intronic	ENSG00000124104	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs373464176	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0002	0.0007	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.45776	NA	NA	0.000698	0	NA	NA	NA	3.999102
1252	21	22849806	22849806	T	C	intronic	NCAM2	NA	NA	NA	intronic	ENSG00000154654	NA	NA	NA	NA	NA	21q21.1	NA	NA	NA	NA	rs200552327	0	0	NA	0.000199681	NA	NA	0.0014	NA	NA	NA	NA	NA	NA	0.0003	0.0006	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.798111	NA	NA	0.000611	0.000546	NA	NA	NA	3.999089
1252	1	54707096	54707096	C	T	intronic	SSBP3	NA	NA	NA	intronic	ENSG00000157216	NA	NA	NA	NA	NA	1p32.3	NA	NA	NA	NA	rs185969894	0.0009	0.0009	NA	0.00139776	NA	NA	0.0014	0.0045	NA	NA	NA	0.0028	0.002	0.0008	0.007	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.888282	NA	NA	0.000116	0.007036	NA	NA	NA	3.999084
1252	1	16890760	16890760	G	A	intronic	NBPF1	NA	NA	NA	intronic	ENSG00000219481	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs1759170	NA	NA	NA	0.00459265	0.001	NA	0.0029	0.0106	0.0061	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.838949	NA	NA	NA	NA	NA	NA	NA	3.999
1252	1	55272578	55272578	C	T	intronic	C1orf177	NA	NA	NA	intronic	ENSG00000162398	NA	NA	NA	NA	NA	1p32.3	NA	NA	NA	NA	rs79251775	0.02	0.02	0.021	0.0349441	0.001	NA	0.0029	0.1301	NA	NA	NA	NA	0.1	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.721492	NA	NA	NA	NA	NA	0.036	NA	3.999
1252	1	160850607	160850607	C	G	intronic	ITLN1	NA	NA	NA	intronic	ENSG00000179914	NA	NA	NA	NA	NA	1q23.3	NA	NA	NA	NA	rs59304310	0.02	0.02	0.026	0.0247604	0.001	NA	0.0101	0.0877	NA	0.0013	NA	0.01	0.1	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.967031	NA	NA	NA	NA	NA	0.014	NA	3.999
1252	1	230845627	230845627	C	T	intronic	AGT	NA	NA	NA	intronic	ENSG00000135744	NA	NA	NA	NA	NA	1q42.2	NA	NA	NA	NA	rs61757176	NA	NA	NA	0.000199681	0.001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.097506	NA	NA	NA	NA	NA	NA	NA	3.999
1252	4	159493702	159493702	G	A	intronic	RXFP1	NA	NA	NA	intronic	ENSG00000171509	NA	NA	NA	NA	NA	4q32.1	NA	NA	NA	NA	rs80171324	0.04	0.04	0.044	0.0441294	0.001	NA	0.0115	0.1604	NA	NA	NA	0.01	0.16	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.041899	NA	NA	NA	NA	NA	0.08	NA	3.999
1252	5	52322521	52322521	C	T	intronic	ITGA2	NA	NA	NA	intronic	ENSG00000164171	NA	NA	NA	NA	NA	5q11.2	NA	NA	NA	NA	rs140114279	0.01	0.01	0.009	0.00399361	0.001	NA	0.0043	0.0121	NA	0.0013	NA	0.01	0.03	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.53841	NA	NA	NA	NA	NA	NA	NA	3.999
1252	6	10784886	10784886	C	G	intronic	MAK	NA	NA	NA	intronic	ENSG00000111837,ENSG00000137210,ENSG00000153157,ENSG00000272162	NA	NA	NA	NA	NA	6p24.2	NA	NA	NA	NA	rs73721390	0.02	0.02	0.028	0.0249601	0.001	NA	0.0029	0.0923	NA	0.0013	NA	0.01	0.1	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.656343	NA	NA	NA	NA	NA	0.022	NA	3.999
1252	7	142991584	142991584	G	A	intronic	CASP2	NA	NA	NA	intronic	ENSG00000106144	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs143373919	0.0018	0.0018	0.001	0.00199681	0.001	NA	0.0029	0.0053	NA	NA	NA	0.0028	0.01	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.701627	NA	NA	NA	NA	NA	NA	NA	3.999
1252	7	158512542	158512542	T	A	intergenic	NCAPG2,ESYT2	dist=15022;dist=11147	NA	NA	ncRNA_exonic	ENSG00000228030	NA	NA	NA	NA	NA	7q36.3	NA	NA	NA	NA	rs184687707	0.0023	0.0023	NA	0.00139776	0.001	NA	0.0058	0.0015	NA	0.0026	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.172777	NA	NA	NA	NA	NA	NA	NA	3.999
1252	9	130980439	130980439	G	A	intronic	DNM1	NA	NA	NA	intronic	ENSG00000106976	NA	NA	NA	NA	NA	9q34.11	NA	NA	NA	NA	rs187644015	0.0018	0.0018	NA	0.00179712	0.001	NA	0.0029	0.0045	NA	NA	NA	0.01	0.0041	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.357072	2.357072	NA	NA	NA	NA	NA	NA	3.999
1252	10	93609442	93609442	G	A	intronic	TNKS2	NA	NA	NA	intronic	ENSG00000107854	NA	NA	NA	NA	NA	10q23.32	NA	NA	NA	NA	rs190665445	0.0005	0.0005	NA	0.000399361	0.001	NA	NA	NA	0.001	0.0013	NA	NA	NA	NA	0.0013	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.183509	NA	NA	NA	NA	NA	NA	NA	3.999
1252	11	10653397	10653397	G	A	intronic	MRVI1	NA	NA	NA	intronic	ENSG00000072952	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs186526080	0.0005	0.0005	NA	0.000199681	0.001	NA	NA	NA	NA	0.0013	NA	NA	NA	NA	0.0013	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.825535	NA	NA	NA	NA	NA	NA	NA	3.999
1252	12	112087679	112087679	T	C	intronic	BRAP	NA	NA	NA	intronic	ENSG00000089234	NA	NA	NA	NA	NA	12q24.12	NA	NA	NA	NA	rs185040219	0.0005	0.0005	NA	0.000199681	0.001	NA	NA	NA	NA	0.0013	NA	NA	NA	NA	0.0013	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.455705	2.455705	NA	NA	NA	NA	NA	NA	3.999
1252	16	84488367	84488367	C	T	intronic	ATP2C2	NA	NA	NA	intronic	ENSG00000064270	NA	NA	NA	NA	NA	16q24.1	NA	NA	NA	NA	rs147087507	0.0009	0.0009	0	0.000798722	0.001	NA	NA	0.0008	0.002	0.0013	NA	NA	0.002	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.240607	NA	NA	NA	NA	NA	0.007	NA	3.999
1252	17	4908378	4908378	G	A	intronic	KIF1C	NA	NA	NA	intronic	ENSG00000129250	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs73345319	0.02	0.02	0.014	0.0249601	0.001	NA	0.0101	0.0885	NA	0.0013	NA	0.01	0.07	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.373254	NA	NA	NA	NA	NA	0.043	NA	3.999
1252	17	5034086	5034086	C	T	intronic	USP6	NA	NA	NA	intronic	ENSG00000129204	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs58062247	0.05	0.05	0.055	0.0692891	0.001	NA	0.0115	0.2557	NA	NA	NA	0.02	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.744862	NA	NA	NA	NA	NA	0.072	NA	3.999
1252	17	5040270	5040270	G	A	intronic	USP6	NA	NA	NA	intronic	ENSG00000129204	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs73331371	0.05	0.05	0.048	0.0690895	0.001	NA	0.0115	0.2549	NA	NA	NA	0.02	0.23	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.695826	NA	NA	NA	NA	NA	0.014	NA	3.999
1252	17	5040555	5040555	G	T	intronic	USP6	NA	NA	NA	intronic	ENSG00000129204	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs58049897	0.05	0.05	0.047	0.0698882	0.001	NA	0.013	0.2549	0.0031	NA	NA	0.02	0.23	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.525717	NA	NA	NA	NA	NA	0.007	NA	3.999
1252	17	5047887	5047887	T	C	intronic	USP6	NA	NA	NA	intronic	ENSG00000129204	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs113986008	0.05	0.05	0.048	0.0692891	0.001	NA	0.0115	0.2557	NA	NA	NA	0.02	0.23	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.913502	NA	NA	NA	NA	NA	0.014	NA	3.999
1252	17	7140611	7140611	C	T	intronic	PHF23	NA	NA	NA	intronic	ENSG00000040633	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs148834333	0.0005	0.0005	0.001	0.00299521	0.001	NA	NA	NA	0.0143	0.0013	NA	NA	NA	NA	0.0013	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.917123	NA	NA	NA	NA	NA	NA	NA	3.999
1252	17	73265607	73265607	T	C	intronic	MIF4GD	NA	NA	NA	intronic	ENSG00000125457	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs73356377	0.08	0.08	0.084	0.104433	0.001	0.0992	0.072	0.2156	0.089	0.0026	0.06	0.07	0.25	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.165962	NA	NA	NA	NA	NA	0.109	NA	3.999
1252	18	60025375	60025375	C	T	intronic	TNFRSF11A	NA	NA	NA	intronic	ENSG00000141655	NA	NA	NA	NA	NA	18q21.33	NA	NA	NA	NA	rs3810024	0.12	0.12	0.112	0.126597	0.001	0.255	0.1066	0.1861	0.0573	NA	0.21	0.11	0.19	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.015642	NA	NA	NA	NA	NA	0.065	NA	3.999
1252	4	74283242	74283242	T	C	intronic	ALB	NA	NA	NA	intronic	ENSG00000163631	NA	NA	NA	NA	NA	4q13.3	NA	NA	NA	NA	rs57705126	0.0014	0.0014	NA	0.00139776	NA	NA	0.0014	0.0045	NA	NA	NA	0.0028	0.0041	0.0009	0.0043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.127333	NA	NA	0.000116	0.004312	NA	NA	NA	3.998984
1252	4	74285950	74285950	C	A	intronic	ALB	NA	NA	NA	intronic	ENSG00000163631	NA	NA	NA	NA	NA	4q13.3	NA	NA	NA	NA	rs61020873	0.0014	0.0014	NA	0.00119808	NA	NA	0.0014	0.0038	NA	NA	NA	0.0028	0.0041	0.0009	0.0045	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.769081	NA	NA	0.000116	0.004543	NA	NA	NA	3.998984
1252	1	55523891	55523891	G	T	intronic	PCSK9	NA	NA	NA	intronic	ENSG00000169174	NA	NA	NA	NA	NA	1p32.3	NA	NA	NA	NA	rs72646516	0.0037	0.0037	NA	0.00599042	NA	NA	0.0014	0.0219	NA	NA	NA	0.0028	0.01	0.0012	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.494396	NA	NA	0	0.010899	NA	NA	NA	3.9988
1252	5	71755984	71755984	C	G	intronic	ZNF366	NA	NA	NA	intronic	ENSG00000178175	NA	NA	NA	NA	NA	5q13.2	NA	NA	NA	NA	rs375204168	NA	NA	NA	0.000199681	0.001	NA	NA	NA	NA	NA	NA	NA	NA	0.0001	0.0001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.455824	1.455824	NA	0.000116	0	NA	NA	NA	3.998784
1252	15	20876423	20876423	A	G	ncRNA_intronic	NBEAP1	NA	NA	NA	ncRNA_intronic	ENSG00000258590	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs10902996	NA	NA	0.241	0.315096	0.3211	0.3681	0.3401	0.23	0.3517	NA	NA	NA	NA	0.347	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.022692	NA	NA	NA	NA	NA	0.261	NA	3.9985666
1252	5	6739806	6739806	C	T	intronic	PAPD7	NA	NA	NA	intronic	ENSG00000112941	NA	NA	NA	NA	NA	5p15.31	NA	NA	NA	NA	rs201764088	NA	NA	NA	0.00159744	NA	0.001	NA	NA	0.0072	NA	NA	NA	NA	0.0015	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.791056	NA	NA	NA	NA	NA	0.007	NA	3.9985
1252	4	46053659	46053659	T	C	intronic	GABRG1	NA	NA	NA	intronic	ENSG00000163285	NA	NA	NA	NA	NA	4p12	NA	NA	NA	NA	rs201125055	0.0005	0.0005	NA	0.000199681	0.001	NA	NA	NA	NA	0.0013	NA	NA	NA	0.0004	0.0013	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.858293	NA	NA	0.000116	0	NA	NA	NA	3.998484
1252	14	105911710	105911710	C	T	intronic	MTA1	NA	NA	NA	intronic	ENSG00000182979,ENSG00000226174	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs369490422	NA	NA	NA	0.000199681	0.001	NA	NA	NA	NA	NA	NA	NA	NA	0.0002	0.0005	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.096615	NA	NA	0.000465	0	NA	NA	NA	3.998335
1252	16	28617057	28617057	G	A	UTR3	SULT1A1	NM_177529:c.*85C>T,NM_177530:c.*85C>T,NM_001055:c.*85C>T,NM_177536:c.*85C>T,NM_177534:c.*85C>T	NA	NA	UTR3	ENSG00000196502	ENST00000350842:c.*85C>T,ENST00000564818:c.*1278C>T,ENST00000562058:c.*1205C>T,ENST00000395607:c.*85C>T,ENST00000395609:c.*85C>T,ENST00000569554:c.*85C>T,ENST00000563493:c.*857C>T,ENST00000314752:c.*85C>T	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs1042157	0.3	0.3	0.235	0.291134	0.335	0.2659	0.4769	0.2284	0.2249	0.35	0.24	0.38	0.22	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.830459	NA	NA	NA	NA	NA	0.174	NA	3.9983334
1252	20	31025231	31025231	T	C	UTR3	ASXL1	NM_015338:c.*90T>C	NA	NA	UTR3	ENSG00000171456	ENST00000375687:c.*90T>C,ENST00000306058:c.*90T>C	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs2295763	0.41	0.41	0.376	0.39976	0.335	0.7421	0.4078	0.1649	0.4254	0.35	0.74	0.35	0.17	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.151797	NA	NA	NA	NA	NA	0.203	NA	3.9983334
1252	18	47500699	47500699	C	T	intronic	MYO5B	NA	NA	NA	intronic	ENSG00000167306	NA	NA	NA	NA	NA	18q21.1	NA	NA	NA	NA	rs73959799	0.01	0.01	0.006	0.00698882	NA	NA	0.0029	0.025	NA	NA	NA	NA	0.03	0.0014	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.446438	NA	NA	0.000357	0.012708	NA	NA	NA	3.998243
1252	2	61463570	61463570	T	C	intronic	USP34	NA	NA	NA	intronic	ENSG00000115464	NA	NA	NA	NA	NA	2p15	NA	NA	NA	NA	rs201798667	0.0005	0.0005	NA	0.000199681	0.001	NA	NA	NA	NA	0.0013	NA	NA	NA	0.0006	0.0013	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.145963	NA	NA	0.000252	0.000566	NA	NA	NA	3.998148
1252	1	67487074	67487074	T	C	intronic	SLC35D1	NA	NA	NA	intronic	ENSG00000116704	NA	NA	NA	NA	NA	1p31.3	NA	NA	NA	NA	rs11208991	0.02	0.02	0.024	0.0307508	0.002	NA	0.0072	0.1112	NA	NA	NA	0.01	0.09	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.134538	NA	NA	NA	NA	NA	0.043	NA	3.998
1252	1	89427251	89427251	C	T	intronic	CCBL2	NA	NA	NA	intronic	ENSG00000137944	NA	NA	NA	NA	NA	1p22.2	NA	NA	NA	NA	rs7513592	0.03	0.03	0.028	0.0383387	0.002	NA	0.0159	0.1354	NA	0.0026	NA	0.02	0.1	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.025671	NA	NA	NA	NA	NA	0.029	NA	3.998
1252	1	120056401	120056401	G	A	intronic	HSD3B1	NA	NA	NA	intronic	ENSG00000203857	NA	NA	NA	NA	NA	1p12	NA	NA	NA	NA	rs6673653	0.04	0.04	0.037	0.0529153	0.002	0.0536	0.0403	0.0998	0.0501	NA	0.04	0.04	0.11	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.50492	NA	NA	NA	NA	NA	0.043	NA	3.998
1252	1	183197828	183197828	G	A	intronic	LAMC2	NA	NA	NA	intronic	ENSG00000058085	NA	NA	NA	NA	NA	1q25.3	NA	NA	NA	NA	rs7537499	0.03	0.03	0.038	0.038738	0.002	NA	0.013	0.1384	NA	0.0013	NA	0.01	0.13	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.661304	NA	NA	NA	NA	NA	0.051	NA	3.998
1252	2	182400092	182400092	A	G	intronic	ITGA4	NA	NA	NA	intronic	ENSG00000115232	NA	NA	NA	NA	NA	2q31.3	NA	NA	NA	NA	rs144195027	0.01	0.01	0.004	0.00878594	0.002	NA	0.0101	0.025	0.002	0.0013	NA	0.01	0.01	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.637345	NA	NA	NA	NA	NA	0.007	NA	3.998
1252	3	9803027	9803027	G	T	intronic	CAMK1,OGG1	NA	NA	NA	intronic	ENSG00000114026,ENSG00000134072	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs11715850	0.0009	0.0009	0.001	0.000399361	0.002	NA	NA	NA	NA	0.0026	NA	NA	NA	NA	0.0026	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.25305	NA	NA	NA	NA	NA	NA	NA	3.998
1252	4	165850742	165850742	C	T	intergenic	LOC100506013,TRIM61	dist=32066;dist=24856	NA	NA	ncRNA_exonic	ENSG00000221891	NA	NA	NA	NA	NA	4q32.3	NA	NA	NA	NA	rs77278655	0.01	0.01	0.009	0.0153754	0.002	NA	0.0072	0.053	NA	0.0026	NA	0.0028	0.04	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.102277	NA	NA	NA	NA	NA	NA	NA	3.998
1252	5	176295364	176295364	C	A	intronic	UNC5A	NA	NA	NA	intronic	ENSG00000113763	NA	NA	NA	NA	NA	5q35.2	NA	NA	NA	NA	rs183051657	0.0027	0.0027	NA	0.00239617	0.002	NA	0.0101	NA	0.0031	0.0013	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.098795	NA	NA	NA	NA	NA	NA	NA	3.998
1252	9	100380227	100380227	A	G	intronic	TSTD2	NA	NA	NA	intronic	ENSG00000136925	NA	NA	NA	NA	NA	9q22.33	NA	NA	NA	NA	rs3750370	0.13	0.13	0.126	0.16853	0.002	0.1498	0.1628	0.4191	0.0245	NA	0.11	0.1	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.709949	NA	NA	NA	NA	NA	0.109	NA	3.998
1252	9	100461350	100461350	C	T	intergenic	XPA,FOXE1	dist=1659;dist=154187	NA	NA	ncRNA_exonic	ENSG00000214417	NA	NA	NA	NA	NA	9q22.33	NA	NA	NA	NA	rs73500392	0.08	0.08	0.091	0.108826	0.002	NA	0.0389	0.3805	0.0133	NA	NA	0.03	0.32	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.87448	NA	NA	NA	NA	NA	0.072	NA	3.998
1252	9	100461387	100461387	G	T	intergenic	XPA,FOXE1	dist=1696;dist=154150	NA	NA	ncRNA_exonic	ENSG00000214417	NA	NA	NA	NA	NA	9q22.33	NA	NA	NA	NA	rs73500393	0.13	0.13	0.116	0.169529	0.002	0.1518	0.1628	0.4213	0.0245	NA	0.11	0.1	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.968576	NA	NA	NA	NA	NA	0.101	NA	3.998
1252	9	100461425	100461425	A	G	intergenic	XPA,FOXE1	dist=1734;dist=154112	NA	NA	ncRNA_exonic	ENSG00000214417	NA	NA	NA	NA	NA	9q22.33	NA	NA	NA	NA	rs73500396	0.13	0.13	0.107	0.169529	0.002	0.1518	0.1628	0.4213	0.0245	NA	0.11	0.1	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.360818	NA	NA	NA	NA	NA	0.101	NA	3.998
1252	12	123795516	123795516	T	C	intronic	SBNO1	NA	NA	NA	intronic	ENSG00000139697	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs183544398	0.0014	0.0014	NA	0.000599042	0.002	NA	NA	0.0008	NA	0.0026	NA	NA	0.002	NA	0.0026	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.551895	NA	NA	NA	NA	NA	NA	NA	3.998
1252	19	33106460	33106460	G	A	intronic	ANKRD27	NA	NA	NA	intronic	ENSG00000105186	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs28412545	0.07	0.07	0.078	0.0802716	0.002	NA	0.0231	0.2905	NA	NA	NA	0.03	0.3	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.846786	NA	NA	NA	NA	NA	0.08	NA	3.998
1252	22	26894729	26894729	G	A	intronic	TFIP11	NA	NA	NA	intronic	ENSG00000100109	NA	NA	NA	NA	NA	22q12.1	NA	NA	NA	NA	rs117809870	0.0023	0.0023	0.003	0.000798722	0.002	NA	0.0029	NA	NA	0.0026	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.343611	NA	NA	NA	NA	NA	NA	NA	3.998
1252	3	141932356	141932356	G	A	intronic	GK5	NA	NA	NA	intronic	ENSG00000175066	NA	NA	NA	NA	NA	3q23	NA	Name=Pol2	Name=50	NA	rs6440072	0.69	0.69	0.699	0.646565	0.662	0.5308	0.6614	0.8601	0.4509	0.68	0.55	0.7	0.86	0.6514	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.631661	NA	NA	0.688721	0.835679	NA	0.601	NA	3.997879
1252	15	83790657	83790657	G	T	intronic	TM6SF1	NA	NA	NA	intronic	ENSG00000136404,ENSG00000166503	NA	NA	NA	NA	NA	15q25.2	NA	NA	NA	NA	rs190032138	0.0032	0.0032	NA	0.00439297	NA	0.0079	NA	0.0106	NA	NA	0.01	NA	0.01	0.0017	0.012	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.035141	NA	NA	0.000465	0.01158	NA	0.007	NA	3.997835
1252	X	2832860	2832860	G	A	intronic	ARSD	NA	NA	NA	intronic	ENSG00000006756	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs73632955	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.523486	NA	NA	NA	NA	NA	NA	NA	3.9978
1252	11	102586214	102586214	T	A	intronic	MMP8	NA	NA	NA	intronic	ENSG00000118113	NA	NA	NA	NA	NA	11q22.2	NA	NA	NA	NA	rs112478920	0.01	0.01	0.007	0.00539137	NA	NA	0.0014	0.0197	NA	NA	NA	0.0028	0.03	0.0021	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.413593	NA	NA	0.000116	0.0202	NA	NA	NA	3.997784
1252	16	1453364	1453364	C	T	intronic	UNKL	NA	NA	NA	intronic	ENSG00000059145	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs200129373	NA	NA	NA	0.000199681	NA	NA	NA	NA	0.001	NA	NA	NA	NA	0.0013	0.0009	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.177217	NA	NA	0.00093	0.000228	NA	NA	NA	3.99777
1252	9	101507814	101507814	G	A	intronic	ANKS6	NA	NA	NA	intronic	ENSG00000165138	NA	NA	NA	NA	NA	9q22.33	NA	NA	NA	NA	rs114369670	0.0037	0.0037	0.003	0.00838658	NA	NA	0.0043	0.0295	NA	NA	NA	0.0028	0.01	0.0023	0.026	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.391664	NA	NA	0	0.026235	NA	NA	NA	3.9977
1252	8	69046263	69046263	G	A	intronic	PREX2	NA	NA	NA	intronic	ENSG00000046889	NA	NA	NA	NA	NA	8q13.2	NA	NA	NA	NA	rs111524733	0.0041	0.0041	0.005	0.00738818	NA	NA	0.0043	0.0257	NA	NA	NA	0.01	0.01	0.0022	0.021	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.33169	1.33169	NA	0.000116	0.020881	NA	0.007	NA	3.997684
1252	2	73898118	73898118	C	T	ncRNA_intronic	ALMS1P	NA	NA	NA	ncRNA_intronic	ENSG00000163016	NA	NA	NA	NA	NA	2p13.1	NA	NA	NA	NA	rs7570683	0.55	0.55	0.489	0.546126	0.669	0.6925	0.6729	0.1573	0.7045	0.66	0.67	0.68	0.16	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.742927	1.742927	NA	NA	NA	NA	0.486	NA	3.9976666
1252	6	44149113	44149113	A	G	intronic	CAPN11	NA	NA	NA	intronic	ENSG00000137225	NA	NA	NA	NA	NA	6p21.1	NA	NA	Name=19	NA	rs67257607	0.32	0.32	0.294	0.273762	0.5278	0.1458	0.3084	0.1717	0.2577	0.54	0.17	0.35	0.14	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.250283	NA	NA	0.474544	0.211705	NA	0.297	NA	3.997656
1252	12	56733682	56733682	T	C	intronic	IL23A	NA	NA	NA	intronic	ENSG00000110944	NA	NA	NA	NA	NA	12q13.3	NA	NA	NA	NA	rs201125188	NA	NA	NA	0.000199681	0.001	NA	NA	NA	NA	NA	NA	NA	NA	0.0006	0.0008	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.168482	NA	NA	0.000814	0	NA	NA	NA	3.997586
1252	14	99932032	99932032	G	C	intronic	SETD3	NA	NA	NA	intronic	ENSG00000183576	NA	NA	NA	NA	NA	14q32.2	NA	NA	NA	NA	rs201325466	0.0005	0.0005	NA	0.000199681	0.001	NA	NA	NA	NA	0.0013	NA	NA	NA	0.0005	0.0013	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.78954	NA	NA	0.00093	0.000454	NA	NA	NA	3.99757
1252	10	72100277	72100277	T	C	intronic	LRRC20	NA	NA	NA	intronic	ENSG00000172731	NA	NA	NA	NA	NA	10q22.1	NA	NA	NA	NA	rs201562678	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0007	0.0017	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.159907	NA	NA	0.001744	0	NA	NA	NA	3.997556
1252	1	55549088	55549088	T	C	intronic	USP24	NA	NA	NA	intronic	ENSG00000162402	NA	NA	NA	NA	NA	1p32.3	NA	NA	NA	NA	rs17111591	0.04	0.04	0.038	0.0459265	0.002	NA	0.0144	0.1649	NA	0.0013	NA	0.02	0.15	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.739783	NA	NA	0.000482	0.133803	NA	0.043	NA	3.997518
1252	10	72645014	72645014	G	C	intronic	PCBD1	NA	NA	NA	intronic	ENSG00000166228	NA	NA	NA	NA	NA	10q22.1	NA	NA	NA	NA	rs367896751	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.001	0.0015	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.435552	NA	NA	0.001512	0	NA	NA	NA	3.997488
1252	2	111398587	111398587	A	C	intronic	BUB1	NA	NA	NA	intronic	ENSG00000169679	NA	NA	NA	NA	NA	2q13	NA	NA	NA	NA	rs147902916	0.0018	0.0018	0.003	0.00139776	0.001	NA	0.0043	0.0023	NA	NA	NA	0.0028	0.01	0.0009	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.02746	4.02746	NA	0.000698	0.000454	NA	NA	NA	3.997402
1252	1	16528224	16528224	A	G	intronic	ARHGEF19	NA	NA	NA	intronic	ENSG00000142632	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs377273211	NA	NA	NA	0.000599042	0.002	NA	NA	0.0008	NA	NA	NA	NA	NA	NA	0.0014	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.177702	NA	NA	0.000629	0.001445	NA	NA	NA	3.997371
1252	19	40228522	40228522	C	T	intronic	CLC	NA	NA	NA	intronic	ENSG00000105205	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs28439433	0.05	0.05	0.06	0.0601038	0.002	NA	0.0274	0.2118	NA	0.0013	NA	0.04	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.755189	NA	NA	0.000629	0.190029	NA	0.014	NA	3.997371
1252	1	89579681	89579681	G	A	intronic	GBP2	NA	NA	NA	intronic	ENSG00000162645	NA	NA	NA	NA	NA	1p22.2	NA	NA	NA	NA	rs191403927	0.0023	0.0023	NA	0.00139776	0.002	NA	0.0029	0.0023	NA	0.0026	NA	0.01	0.002	0.0003	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.528836	NA	NA	0.000349	0.000908	NA	NA	NA	3.997351
1252	1	112192044	112192044	C	T	intronic	RAP1A	NA	NA	NA	ncRNA_exonic	ENSG00000215867	NA	NA	NA	NA	NA	1p13.2	NA	NA	NA	NA	rs2076585	0.33	0.33	0.324	0.322484	0.336	0.4375	0.3271	0.1649	0.3998	0.32	0.44	0.37	0.16	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.928721	NA	NA	NA	NA	NA	0.297	NA	3.9973333
1252	11	9052170	9052170	G	A	intronic	SCUBE2	NA	NA	NA	ncRNA_intronic	ENSG00000253973	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs10769983	0.18	0.18	0.158	0.154353	0.336	0.0744	0.2911	0.0129	0.1442	0.33	0.09	0.22	0.02	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.495491	NA	NA	NA	NA	NA	0.275	NA	3.9973333
1252	19	51920240	51920240	G	T	intronic	LOC100129083,SIGLEC10	NA	NA	NA	ncRNA_intronic	ENSG00000255441	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs112587079	0.08	0.08	0.078	0.0958466	0.1203	0.0437	0.0764	0.1014	0.1309	0.11	0.03	0.08	0.08	0.1048	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.511336	2.511336	NA	0.11093	0.100318	NA	0.065	NA	3.9973033
1252	4	110670340	110670340	G	A	intronic	CFI	NA	NA	NA	intronic	ENSG00000205403	NA	NA	NA	NA	NA	4q25	NA	NA	NA	NA	rs139522303	0.0005	0.0005	0.001	0.000599042	0.001	NA	NA	NA	0.002	0.0013	NA	NA	NA	0.0009	0.0013	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.301697	3.301697	NA	0.000814	0.000454	NA	NA	NA	3.997286
1252	2	111556710	111556710	C	G	intronic	ACOXL	NA	NA	NA	intronic	ENSG00000153093	NA	NA	NA	NA	NA	2q13	NA	NA	NA	NA	rs144853600	0.0023	0.0023	0.002	0.00159744	0.001	NA	0.0043	0.003	NA	NA	NA	0.0028	0.01	0.0011	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.169979	NA	NA	0.000698	0.000454	NA	NA	NA	3.997202
1252	12	57958364	57958364	A	G	intronic	KIF5A	NA	NA	NA	intronic	ENSG00000155980	NA	NA	NA	NA	NA	12q13.3	NA	NA	NA	NA	rs75527218	0.01	0.01	0.015	0.0233626	NA	NA	0.0101	0.0825	0.001	NA	NA	0.01	0.05	NA	0.092	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.951105	NA	NA	0.002828	0.091763	NA	0.036	NA	3.997172
1252	3	193365793	193365793	C	A	intronic	OPA1	NA	NA	NA	intronic	ENSG00000198836	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs73888660	0.01	0.01	0.006	0.00978435	0.001	NA	0.0058	0.0333	NA	0.0013	NA	0.01	0.02	NA	0.025	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.411808	NA	NA	0.001886	0.024566	NA	NA	NA	3.997114
1252	6	29912451	29912451	C	A	intronic	HLA-A	NA	NA	NA	intronic	ENSG00000206503	NA	NA	NA	NA	NA	6p22.1	NA	Name=Pol2-4H8,Pol2	NA	NA	rs9260193	0.51	0.51	0.367	0.530351	0.5179	0.4871	0.5965	0.5968	0.4509	0.49	0.45	0.52	0.61	0.485	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.233551	NA	NA	NA	NA	NA	0.138	NA	3.9971
1252	12	48597079	48597079	G	A	upstream	OR10AD1	NA	NA	NA	UTR5	ENSG00000172640	ENST00000310248:c.-4C>T	NA	NA	NA	NA	12q13.11	NA	NA	NA	NA	rs200357379	0.0005	0.0005	NA	0.000599042	0.001	NA	0.0029	NA	NA	0.0013	NA	NA	NA	0.001	0.0013	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.142858	NA	NA	0.000931	0.000454	NA	NA	NA	3.997069
1252	1	120050300	120050300	G	T	intronic	HSD3B1	NA	NA	NA	intronic	ENSG00000203857	NA	NA	NA	NA	NA	1p12	NA	NA	NA	NA	rs6671149	0.06	0.06	0.043	0.0672923	0.003	0.0546	0.0461	0.1505	0.0491	NA	0.04	0.04	0.18	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.803102	NA	NA	NA	NA	NA	0.043	NA	3.997
1252	1	120053996	120053996	A	G	intronic	HSD3B1	NA	NA	NA	intronic	ENSG00000203857	NA	NA	NA	NA	NA	1p12	NA	NA	NA	NA	rs2273582	0.06	0.06	0.056	0.0672923	0.003	0.0546	0.0461	0.1505	0.0491	NA	0.04	0.04	0.18	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.672598	NA	NA	NA	NA	NA	0.043	NA	3.997
1252	1	120144172	120144172	G	T	intergenic	LINC00622,ZNF697	dist=2258;dist=17828	NA	NA	ncRNA_intronic	ENSG00000198857	NA	NA	NA	NA	NA	1p12	NA	NA	NA	NA	rs76710296	0.02	0.02	0.018	0.0179712	0.003	NA	0.0043	0.0635	NA	NA	NA	NA	0.07	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.426932	NA	NA	NA	NA	NA	0.014	NA	3.997
1252	3	100014947	100014947	C	T	intronic	TBC1D23	NA	NA	NA	intronic	ENSG00000036054	NA	NA	NA	NA	NA	3q12.2	NA	NA	NA	NA	rs186180204	0.0014	0.0014	NA	0.00119808	0.003	NA	0.0029	NA	0.001	0.0026	NA	0.0028	NA	NA	0.0028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.146711	NA	NA	NA	NA	NA	NA	NA	3.997
1252	6	10697440	10697440	T	C	intronic	PAK1IP1	NA	NA	NA	intronic	ENSG00000111845	NA	NA	NA	NA	NA	6p24.2	NA	NA	NA	NA	rs12661484	0.07	0.07	0.085	0.0976438	0.003	0.0387	0.013	0.3147	0.0225	0.0013	0.03	0.01	0.28	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.154928	NA	NA	NA	NA	NA	0.101	NA	3.997
1252	6	10697781	10697781	T	C	intronic	PAK1IP1	NA	NA	NA	intronic	ENSG00000111845	NA	NA	NA	NA	NA	6p24.2	NA	NA	NA	NA	rs76347296	0.07	0.07	0.085	0.0976438	0.003	0.0387	0.013	0.3147	0.0225	0.0013	0.03	0.01	0.28	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.061256	NA	NA	NA	NA	NA	0.109	NA	3.997
1252	6	109610895	109610895	T	C	intergenic	LOC100996634,CCDC162P	dist=19178;dist=4611	NA	NA	ncRNA_intronic	ENSG00000219700	NA	NA	NA	NA	NA	6q21	NA	NA	NA	NA	rs141627638	0.0009	0.0009	0.002	0.000998403	0.003	NA	NA	NA	0.002	0.0026	NA	NA	NA	NA	0.0026	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.556037	NA	NA	NA	NA	NA	NA	NA	3.997
1252	7	22165364	22165364	C	G	intronic	RAPGEF5	NA	NA	NA	intronic	ENSG00000136237	NA	NA	NA	NA	NA	7p15.3	NA	NA	NA	NA	rs143813660	0.0009	0.0009	0.001	0.000599042	0.003	NA	NA	NA	NA	0.0026	NA	NA	NA	NA	0.0026	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.511564	NA	NA	NA	NA	NA	NA	NA	3.997
1252	9	140638045	140638045	C	T	intronic	EHMT1	NA	NA	NA	intronic	ENSG00000181090	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs116060838	0.04	0.04	0.042	0.0469249	0.003	NA	0.0187	0.1657	NA	NA	NA	0.02	0.15	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.192943	2.192943	NA	NA	NA	NA	0.051	NA	3.997
1252	10	61083971	61083971	A	T	intronic	FAM13C	NA	NA	NA	intronic	ENSG00000148541	NA	NA	NA	NA	NA	10q21.1	NA	NA	NA	NA	rs184228693	0.0018	0.0018	NA	0.00119808	0.003	NA	0.0043	NA	NA	0.0013	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.916457	NA	NA	NA	NA	NA	NA	NA	3.997
1252	12	130855628	130855628	C	G	intronic	PIWIL1	NA	NA	NA	intronic	ENSG00000125207	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs181209074	0.0014	0.0014	NA	0.000998403	0.003	NA	0.0029	NA	NA	0.0013	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.910101	NA	NA	NA	NA	NA	NA	NA	3.997
1252	16	1995763	1995763	G	A	intronic	RPL3L	NA	NA	NA	intronic	ENSG00000140986	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs143778334	0.0005	0.0005	0.001	0.000599042	0.003	NA	NA	NA	NA	0.0013	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.809245	NA	NA	NA	NA	NA	0.007	NA	3.997
1252	17	7535422	7535422	G	C	intronic	SHBG	NA	NA	NA	intronic	ENSG00000129214	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs143434056	0.01	0.01	0	0.0109824	0.003	NA	0.0749	NA	NA	0.01	NA	0.04	NA	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.166929	NA	NA	NA	NA	NA	0.007	NA	3.997
1252	17	10541817	10541817	G	A	intronic	MYH3	NA	NA	NA	intronic	ENSG00000109063	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs112279473	0.01	0.01	NA	0.00678914	0.003	NA	0.0072	0.0144	0.0072	0.004	NA	0.01	0.01	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.14351	NA	NA	NA	NA	NA	0.007	NA	3.997
1252	17	73235728	73235728	C	T	intronic	GGA3	NA	NA	NA	intronic	ENSG00000125447	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs9902741	0.14	0.14	0.146	0.16893	0.003	0.1002	0.0879	0.4486	0.09	0.004	0.06	0.09	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.608857	NA	NA	NA	NA	NA	0.196	NA	3.997
1252	19	7809178	7809178	T	C	intronic	CD209	NA	NA	NA	intronic	ENSG00000090659	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs61058460	0.03	0.03	0.035	0.0359425	0.003	NA	0.0101	0.1286	NA	NA	NA	0.01	0.12	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.294943	NA	NA	NA	NA	NA	0.058	NA	3.997
1252	19	14568772	14568772	G	A	intronic	PKN1	NA	NA	NA	intronic	ENSG00000123143	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs56163142	0.0018	0.0018	0.002	0.000998403	0.003	NA	0.0029	NA	NA	0.0026	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.688916	NA	NA	NA	NA	NA	NA	NA	3.997
1252	13	33739459	33739459	C	T	intronic	STARD13	NA	NA	NA	intronic	ENSG00000133121	NA	NA	NA	NA	NA	13q13.1	NA	NA	NA	NA	rs79458853	0.01	0.01	0.012	0.0119808	NA	0.002	NA	0.0439	NA	NA	NA	NA	0.04	0.0029	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.063847	NA	NA	0.000116	0.034044	NA	0.014	NA	3.996984
1252	16	27445795	27445795	C	G	intronic	IL21R	NA	NA	NA	intronic	ENSG00000103522	NA	NA	NA	NA	NA	16p12.1	NA	NA	NA	NA	rs200904384	0.0005	0.0005	NA	0.000199681	NA	NA	0.0014	NA	NA	NA	NA	0.0028	NA	0.0013	0.0028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.292238	NA	NA	0.00186	0.000683	NA	0.007	NA	3.99684
1252	1	89755671	89755671	T	A	ncRNA_exonic	LOC729930	NA	NA	NA	ncRNA_exonic	ENSG00000238081	NA	NA	NA	NA	NA	1p22.2	NA	NA	NA	NA	rs623771	0.66	0.66	0.632	0.638978	0.67	0.4881	0.7406	0.8192	0.4468	0.66	0.49	0.72	0.81	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.338573	NA	NA	NA	NA	NA	0.681	NA	3.9966666
1252	10	11893971	11893971	T	G	ncRNA_intronic	PROSER2-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000225778	NA	NA	NA	NA	NA	10p14	NA	NA	NA	NA	rs7079747	0.69	0.69	0.692	0.653554	0.67	0.8333	0.6254	0.5673	0.5879	0.66	0.82	0.65	0.59	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.629851	NA	NA	NA	NA	NA	0.645	NA	3.9966666
1252	19	43520205	43520205	G	A	intronic	PSG11	NA	NA	NA	intronic	ENSG00000243130	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs200592598	NA	NA	NA	0.000599042	0.003	NA	NA	NA	NA	NA	NA	NA	NA	0.0004	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.42577	NA	NA	NA	NA	NA	NA	NA	3.9966
1252	11	62402523	62402523	G	C	intronic	GANAB	NA	NA	NA	intronic	ENSG00000089597	NA	NA	NA	NA	NA	11q12.3	NA	NA	NA	NA	rs372157422	NA	NA	NA	0.000599042	0.003	NA	NA	NA	NA	NA	NA	NA	NA	0.0002	0.0002	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.23718	NA	NA	0.000233	0	NA	NA	NA	3.996567
1252	17	7011093	7011093	C	T	intronic	ASGR2	NA	NA	NA	intronic	ENSG00000161944	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs2455554	NA	NA	0.213	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0036	0.054	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.617124	NA	NA	NA	NA	NA	0.036	NA	3.9964
1252	8	75274253	75274253	G	A	intronic	GDAP1	NA	NA	NA	intronic	ENSG00000104381	NA	NA	NA	NA	NA	8q21.11	NA	NA	NA	NA	rs75294039	0.01	0.01	0.009	0.0103834	0.001	NA	0.0058	0.0356	NA	0.0013	NA	0.01	0.02	0.0028	0.028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.085515	NA	NA	0	0.027463	NA	0.007	NA	3.9962
1252	15	80873420	80873420	C	T	intronic	ARNT2	NA	NA	NA	intronic	ENSG00000172379	NA	NA	NA	NA	NA	15q25.1	NA	NA	NA	NA	rs138620470	0.0014	0.0014	0.001	0.000998403	0.001	NA	0.0014	0.0023	NA	NA	NA	0.0028	0.0041	0.0028	0.0041	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.727884	NA	NA	NA	NA	NA	NA	NA	3.9962
1252	9	101798509	101798509	G	C	intronic	COL15A1	NA	NA	NA	intronic	ENSG00000204291	NA	NA	NA	NA	NA	9q22.33	NA	NA	NA	NA	rs199692982	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0012	0.0027	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.605977	NA	NA	0.002674	0.000454	NA	NA	NA	3.996126
1252	13	37016284	37016284	A	T	intronic	CCNA1	NA	NA	NA	intronic	ENSG00000133101	NA	NA	NA	NA	NA	13q13.3	NA	NA	NA	NA	rs79227961	0.0027	0.0027	0.004	0.00339457	0.002	NA	0.0043	0.0091	NA	0.0013	NA	NA	0.01	0.0013	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.387514	NA	NA	0.000581	0.001362	NA	0.007	NA	3.996119
1252	18	60015542	60015542	T	C	intronic	TNFRSF11A	NA	NA	NA	intronic	ENSG00000141655	NA	NA	NA	NA	NA	18q21.33	NA	NA	NA	NA	rs3826618	0.13	0.13	0.117	0.140575	0.002	0.2907	0.1124	0.2042	0.0624	0.0013	0.25	0.11	0.21	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.146185	NA	NA	0.001886	0.151734	NA	0.072	NA	3.996114
1252	13	24871899	24871899	A	G	intronic	SPATA13	NA	NA	NA	intronic	ENSG00000182957	NA	NA	NA	NA	NA	13q12.12	NA	NA	NA	NA	rs201345366	0.0018	0.0018	NA	0.000998403	0.002	NA	0.0043	NA	NA	0.0026	NA	0.01	NA	0.0012	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.770676	NA	NA	0.000698	0.000454	NA	NA	NA	3.996102
1252	10	105791929	105791929	C	G	UTR3	COL17A1	NM_000494:c.*64G>C	NA	NA	UTR3	ENSG00000065618	ENST00000369733:c.*64G>C,ENST00000353479:c.*64G>C	NA	NA	NA	NA	10q24.33	NA	NA	NA	NA	rs805687	0.21	0.21	0.222	0.228834	0.167	0.1012	0.2248	0.4221	0.1656	0.18	0.09	0.21	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.183391	NA	NA	0.170333	0.373555	NA	0.188	NA	3.9960004
1252	1	160783794	160783794	G	T	intronic	LY9	NA	NA	NA	intronic	ENSG00000122224	NA	NA	NA	NA	NA	1q23.3	NA	NA	NA	NA	rs12738298	0.05	0.05	0.05	0.0511182	0.004	0.0437	0.0086	0.1127	0.0542	0.004	0.07	0.01	0.13	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.582043	NA	NA	NA	NA	NA	0.08	NA	3.996
1252	2	130912575	130912575	G	T	intronic	SMPD4	NA	NA	NA	intronic	ENSG00000136699	NA	NA	NA	NA	NA	2q21.1	NA	NA	NA	NA	rs112475012	0.02	0.02	0.018	0.0175719	0.004	NA	0.013	0.0567	NA	0.004	NA	0.01	0.07	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.974577	NA	NA	NA	NA	NA	0.014	NA	3.996
1252	2	130988700	130988700	C	T	intergenic	TUBA3E,CCDC115	dist=32666;dist=107116	NA	NA	ncRNA_exonic	ENSG00000213225	NA	NA	NA	NA	NA	2q21.1	NA	NA	NA	NA	rs150105236	0.02	0.02	0.018	0.0307508	0.004	NA	0.0144	0.1059	NA	0.004	NA	0.01	0.09	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.692548	NA	NA	NA	NA	NA	0.022	NA	3.996
1252	2	160873007	160873007	G	C	intronic	PLA2R1	NA	NA	NA	intronic	ENSG00000153246	NA	NA	NA	NA	NA	2q24.2	NA	NA	NA	NA	rs189059429	0.0027	0.0027	NA	0.00319489	0.004	NA	0.0043	0.0008	0.0082	0.01	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.530043	NA	NA	NA	NA	NA	NA	NA	3.996
1252	6	10749608	10749608	C	G	intronic	TMEM14B	NA	NA	NA	intronic	ENSG00000137210,ENSG00000153157,ENSG00000272162	NA	NA	NA	NA	NA	6p24.2	NA	NA	NA	NA	rs115200994	0.02	0.02	0.017	0.0207668	0.004	NA	0.0115	0.0681	0.002	NA	NA	0.01	0.08	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.071033	NA	NA	NA	NA	NA	0.029	NA	3.996
1252	7	23794175	23794175	A	G	intronic	STK31	NA	NA	NA	intronic	ENSG00000196335	NA	NA	NA	NA	NA	7p15.3	NA	NA	NA	NA	rs189203911	0.0023	0.0023	NA	0.00199681	0.004	NA	0.0029	NA	0.0041	0.0026	NA	0.01	0.002	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.585031	NA	NA	NA	NA	NA	NA	NA	3.996
1252	9	140712324	140712324	T	C	intronic	EHMT1	NA	NA	NA	intronic	ENSG00000181090	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs10283789	0.14	0.14	0.158	0.171925	0.004	0.005	0.049	0.6188	NA	NA	0.0017	0.04	0.59	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.064055	NA	NA	NA	NA	NA	0.159	NA	3.996
1252	9	140712387	140712387	A	G	intronic	EHMT1	NA	NA	NA	intronic	ENSG00000181090	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs10283760	0.14	0.14	0.164	0.177316	0.004	0.005	0.049	0.6392	NA	NA	0.0017	0.04	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.713265	NA	NA	NA	NA	NA	0.167	NA	3.996
1252	11	118428668	118428668	G	A	intronic	IFT46	NA	NA	NA	intronic	ENSG00000118096	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs112890356	0.02	0.02	0.023	0.0301518	0.004	0.0119	0.0115	0.087	0.0123	0.01	0.01	0.02	0.07	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.127555	NA	NA	NA	NA	NA	0.014	NA	3.996
1252	15	41384092	41384092	C	T	intronic	INO80	NA	NA	NA	intronic	ENSG00000128908	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs112188222	0.04	0.04	0.044	0.0533147	0.004	NA	0.0173	0.1717	0.0245	0.004	NA	0.02	0.16	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.918867	NA	NA	NA	NA	NA	0.109	NA	3.996
1252	15	67571907	67571907	G	A	intronic	IQCH	NA	NA	NA	intronic	ENSG00000103599	NA	NA	NA	NA	NA	15q23	NA	NA	NA	NA	rs184732915	0.0014	0.0014	NA	0.000998403	0.004	NA	NA	NA	0.001	0.004	NA	NA	NA	NA	0.004	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.738986	NA	NA	NA	NA	NA	NA	NA	3.996
1252	15	81615845	81615845	T	C	intronic	STARD5	NA	NA	NA	intronic	ENSG00000172345	NA	NA	NA	NA	NA	15q25.1	NA	NA	NA	NA	rs139226471	0.03	0.03	0.027	0.0373403	0.004	NA	0.0101	0.1331	NA	0.004	NA	0.0028	0.12	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.393046	NA	NA	NA	NA	NA	NA	NA	3.996
1252	16	24104322	24104322	A	C	intronic	PRKCB	NA	NA	NA	intronic	ENSG00000166501	NA	NA	NA	NA	NA	16p12.2	NA	NA	NA	NA	rs3729898	0.05	0.05	0.057	0.0644968	0.004	NA	0.0245	0.2284	NA	0.01	NA	0.02	0.19	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.1161	NA	NA	NA	NA	NA	0.058	NA	3.996
1252	17	61561024	61561024	C	T	intronic	ACE	NA	NA	NA	intronic	ENSG00000159640	NA	NA	NA	NA	NA	17q23.3	NA	NA	NA	NA	rs182675474	0.0018	0.0018	NA	0.000798722	0.004	NA	NA	NA	NA	0.01	NA	NA	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.681696	2.681696	NA	NA	NA	NA	NA	NA	3.996
1252	8	48962552	48962552	G	A	intronic	UBE2V2	NA	NA	NA	intronic	ENSG00000169139	NA	NA	NA	NA	NA	8q11.21	NA	NA	NA	NA	rs118090687	0.0005	0.0005	0.002	0.000798722	0.001	NA	NA	0.0023	NA	NA	NA	NA	0.002	0.0013	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.715751	NA	NA	0.001719	0.000275	NA	0.007	NA	3.995981
1252	12	121707321	121707321	G	A	intronic	CAMKK2	NA	NA	NA	intronic	ENSG00000110931	NA	NA	NA	NA	NA	12q24.31	NA	NA	Name=8	NA	rs1109453	0.27	0.27	0.293	0.283946	0.33	0.0159	0.2219	0.472	0.3027	0.34	0.02	0.23	0.5	0.3427	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.143369	2.143369	NA	0.331589	0.425556	NA	0.261	NA	3.995711
1252	19	10099964	10099964	G	A	intronic	COL5A3	NA	NA	NA	intronic	ENSG00000080573	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs116064043	0.01	0.01	0.014	0.0171725	NA	NA	0.0043	0.0628	NA	NA	NA	NA	0.05	0.0042	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.707639	NA	NA	0.000116	0.041534	NA	0.014	NA	3.995684
1252	1	11854395	11854395	C	T	intronic	MTHFR	NA	NA	NA	intronic	ENSG00000177000	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs201780607	0	0	NA	0.000399361	0.001	NA	NA	0.0008	NA	NA	NA	NA	NA	0.001	0.0023	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.461794	1.461794	NA	0.002326	0.000681	NA	NA	NA	3.995674
1252	9	116795059	116795059	C	T	intronic	ZNF618	NA	NA	NA	intronic	ENSG00000157657	NA	NA	NA	NA	NA	9q32	NA	NA	NA	NA	rs73658318	0.05	0.05	0.05	0.052516	NA	NA	0.0317	0.1808	0.002	NA	NA	0.03	0.19	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.740361	NA	NA	0.004589	0.151253	NA	0.051	NA	3.995411
1252	2	26802392	26802392	A	T	UTR3	C2orf70	NM_001105519:c.*86A>T	NA	NA	UTR3	ENSG00000173557	ENST00000329615:c.*86A>T,ENST00000409392:c.*99A>T,ENST00000453368:c.*86A>T	NA	NA	NA	NA	2p23.3	NA	NA	NA	NA	rs2272467	0.36	0.36	0.337	0.361821	0.338	0.627	0.2334	0.1899	0.4366	0.34	0.6	0.22	0.22	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.930122	NA	NA	NA	NA	NA	0.326	NA	3.9953334
1252	1	54477961	54477961	G	T	intronic	LDLRAD1	NA	NA	NA	intronic	ENSG00000203985	NA	NA	NA	NA	NA	1p32.3	NA	NA	NA	NA	rs115400537	0.01	0.01	0.013	0.0129792	NA	NA	0.0014	0.0484	NA	NA	NA	0.0028	0.05	0.0045	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.02538	NA	NA	0.000233	0.048797	NA	0.014	NA	3.995267
1252	19	5613552	5613552	T	C	intronic	SAFB2	NA	NA	NA	intronic	ENSG00000130254	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs201943640	0.0005	0.0005	NA	0.000199681	0.001	NA	NA	NA	NA	0.0013	NA	NA	NA	0.0011	0.0027	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.579655	2.579655	NA	0.002674	0.000227	NA	NA	NA	3.995226
1252	6	29912457	29912457	C	G	intronic	HLA-A	NA	NA	NA	intronic	ENSG00000206503	NA	NA	NA	NA	NA	6p22.1	NA	Name=Pol2-4H8,Pol2	NA	NA	rs9260194	0.49	0.49	0.325	0.53115	0.5199	0.4871	0.5965	0.5991	0.4499	0.46	0.44	0.51	0.6	0.4849	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.062185	NA	NA	NA	NA	NA	0.138	NA	3.9952
1252	6	37250112	37250112	A	G	exonic	TBC1D22B	NA	synonymous SNV	TBC1D22B:NM_017772:exon4:c.A573G:p.Q191Q	exonic	ENSG00000065491	NA	synonymous SNV	ENSG00000065491:ENST00000373491:exon4:c.A573G:p.Q191Q	Score=547;Name=lod=223	NA	6p21.2	NA	NA	NA	NA	rs195753	0.92	0.92	0.941	0.924521	0.8857	0.9018	0.9121	0.9917	0.9059	0.89	0.92	0.9	0.98	0.9073	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.076712	NA	NA	0.878488	0.97163	NA	0.942	NA	3.9951786
1252	4	170990258	170990258	T	G	intronic	AADAT	NA	NA	NA	intronic	ENSG00000109576	NA	NA	NA	NA	NA	4q33	NA	NA	NA	NA	rs144212903	0.0005	0.0005	0.001	0.00119808	0.001	NA	NA	NA	0.0051	0.0013	NA	NA	NA	0.0021	0.0019	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.34531	NA	NA	0.00186	0.000227	NA	NA	NA	3.99504
1252	1	20469816	20469816	C	T	intronic	PLA2G2F	NA	NA	NA	intronic	ENSG00000158786	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs12746110	0.0023	0.0023	0.001	0.00199681	0.005	NA	0.0029	NA	0.0031	0.004	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.003328	NA	NA	NA	NA	NA	NA	NA	3.995
1252	2	32855522	32855522	T	C	intronic	TTC27	NA	NA	NA	intronic	ENSG00000018699	NA	NA	NA	NA	NA	2p22.3	NA	NA	NA	NA	rs138590010	0.0032	0.0032	0.003	0.00259585	0.005	NA	0.0058	0.0015	0.002	0.004	NA	0.01	0.002	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.647059	NA	NA	NA	NA	NA	NA	NA	3.995
1252	2	88825014	88825014	C	T	intronic	TEX37	NA	NA	NA	intronic	ENSG00000172073	NA	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs34724508	0.0018	0.0018	0	0.00139776	0.005	NA	0.0014	0.0008	NA	0.004	NA	0.0028	NA	NA	0.004	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.358393	NA	NA	NA	NA	NA	NA	NA	3.995
1252	3	3143296	3143296	G	A	intronic	IL5RA	NA	NA	NA	intronic	ENSG00000091181	NA	NA	NA	NA	NA	3p26.2	NA	NA	NA	NA	rs35418165	0.0023	0.0023	NA	0.00159744	0.005	NA	0.0043	NA	NA	0.004	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.440456	NA	NA	NA	NA	NA	NA	NA	3.995
1252	3	149182144	149182144	C	A	intergenic	TM4SF1,TM4SF4	dist=86576;dist=10224	NA	NA	ncRNA_exonic	ENSG00000241929	NA	NA	NA	NA	NA	3q25.1	NA	NA	NA	NA	rs144946430	0.0041	0.0041	0.001	0.00279553	0.005	NA	0.0101	NA	0.002	0.01	NA	0.01	NA	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.106056	NA	NA	NA	NA	NA	0.014	NA	3.995
1252	6	152415403	152415403	T	C	intronic	ESR1	NA	NA	NA	intronic	ENSG00000091831	NA	NA	NA	NA	NA	6q25.1	NA	NA	NA	NA	rs189426279	0.0014	0.0014	NA	0.00159744	0.005	NA	0.0043	NA	NA	0.0026	NA	0.0028	NA	NA	0.0028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.90817	NA	NA	NA	NA	NA	NA	NA	3.995
1252	7	107214059	107214059	A	G	intronic	DUS4L	NA	NA	NA	intronic	ENSG00000105865	NA	NA	NA	NA	NA	7q22.3	NA	NA	NA	NA	rs140196860	0.0027	0.0027	0.002	0.00239617	0.005	0.001	0.0029	NA	0.0041	0.01	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.344085	NA	NA	NA	NA	NA	NA	NA	3.995
1252	9	33386887	33386887	A	G	intronic	AQP7	NA	NA	NA	intronic	ENSG00000165269	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs4008677	NA	NA	0.229	0.00219649	0.005	0.003	NA	NA	0.0031	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.634791	NA	NA	NA	NA	NA	NA	NA	3.995
1252	9	116038752	116038752	G	A	intronic	PRPF4	NA	NA	NA	intronic	ENSG00000136875	NA	NA	NA	NA	NA	9q32	NA	NA	NA	NA	rs148470635	0.0027	0.0027	0.003	0.00259585	0.005	NA	0.0029	0.0008	0.0051	0.01	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.30131	NA	NA	NA	NA	NA	NA	NA	3.995
1252	11	72013076	72013076	A	C	intronic	CLPB	NA	NA	NA	intronic	ENSG00000162129	NA	NA	NA	NA	NA	11q13.4	NA	NA	NA	NA	rs117838928	0.0018	0.0018	0.001	0.000998403	0.005	NA	NA	NA	NA	0.01	NA	NA	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.442722	NA	NA	NA	NA	NA	NA	NA	3.995
1252	11	118951724	118951724	A	G	intronic	VPS11	NA	NA	NA	intronic	ENSG00000160695	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs7122226	0.05	0.05	0.06	0.0441294	0.005	NA	0.0259	0.1498	NA	0.01	NA	0.02	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.144305	NA	NA	NA	NA	NA	0.072	NA	3.995
1252	15	78269618	78269618	C	T	intergenic	LOC645752,LOC91450	dist=50430;dist=15957	NA	NA	ncRNA_intronic	ENSG00000261143	NA	NA	NA	NA	NA	15q24.3	NA	NA	NA	NA	rs149013369	0.01	0.01	0.013	0.0163738	0.005	NA	0.0058	0.0499	0.0072	0.0026	NA	0.01	0.05	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.548417	NA	NA	NA	NA	NA	0.014	NA	3.995
1252	16	21387937	21387937	G	A	ncRNA_intronic	SNX29P1	NA	NA	NA	intergenic	ENSG00000257403,ENSG00000158482	dist=24478;dist=3376	NA	NA	NA	NA	16p12.2	NA	NA	NA	NA	rs144947407	0.01	0.01	0.003	0.0133786	0.005	0.0179	0.0115	0.0008	0.0358	0.0013	0.02	0.01	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.580888	NA	NA	NA	NA	NA	NA	NA	3.995
1252	19	8005858	8005858	G	A	intronic	TIMM44	NA	NA	NA	intronic	ENSG00000104980	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs77436248	0.07	0.07	0.064	0.0591054	0.005	0.2192	0.0865	0.0015	0.0082	0.01	0.22	0.07	0.0041	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.490787	NA	NA	NA	NA	NA	0.022	NA	3.995
1252	20	31765890	31765890	T	C	intronic	BPIFA2	NA	NA	NA	intronic	ENSG00000131050	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs8125148	0.03	0.03	0.03	0.0279553	0.005	NA	0.0058	0.0991	NA	0.01	NA	0.01	0.11	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.152297	NA	NA	NA	NA	NA	0.029	NA	3.995
1253	3	123022092	123022092	G	A	intronic	ADCY5	NA	NA	NA	intronic	ENSG00000173175	NA	NA	NA	NA	NA	3q21.1	NA	NA	NA	NA	rs181457782	0.0018	0.0018	NA	0.000599042	0.003	NA	NA	NA	NA	0.01	NA	NA	NA	0.0009	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.38009	NA	NA	0.001396	0	NA	NA	NA	3.994704
1253	12	57883632	57883632	C	T	intronic	MARS	NA	NA	NA	intronic	ENSG00000166986	NA	NA	NA	NA	NA	12q13.3	NA	NA	NA	NA	rs77551014	0.0018	0.0018	0.002	0.00259585	NA	NA	0.0014	0.0083	0.001	NA	NA	NA	0.01	0.0024	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.868182	1.868182	NA	0.003023	0.010213	NA	0.014	NA	3.994577
1253	21	41415996	41415996	A	T	intronic	DSCAM	NA	NA	NA	intronic	ENSG00000171587	NA	NA	NA	NA	NA	21q22.2	NA	NA	NA	NA	rs200011504	0.0027	0.0027	NA	0.00379393	0.003	NA	0.0014	0.0098	0.002	0.0013	NA	NA	0.01	0.0015	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.297156	NA	NA	0.000932	0.004786	NA	NA	NA	3.994568
1253	1	161180061	161180061	G	A	intronic	NDUFS2	NA	NA	NA	intronic	ENSG00000158864	NA	NA	NA	NA	NA	1q23.3	NA	NA	NA	NA	rs115682162	0.01	0.01	0.004	0.0123802	0.001	NA	0.0086	0.0416	NA	NA	NA	0.01	0.02	0.0045	0.049	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.477198	NA	NA	0	0.04857	NA	NA	NA	3.9945
1253	6	10749582	10749582	A	G	intronic	TMEM14B	NA	NA	NA	intronic	ENSG00000137210,ENSG00000153157,ENSG00000272162	NA	NA	NA	NA	NA	6p24.2	NA	NA	NA	NA	rs116269210	0.02	0.02	0.016	0.0207668	0.004	NA	0.0115	0.0681	0.002	NA	NA	0.01	0.08	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.403774	NA	NA	0.001571	0.049855	NA	0.029	NA	3.994429
1253	X	2832771	2832771	C	T	intronic	ARSD	NA	NA	NA	intronic	ENSG00000006756	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs78142040	0.0012	0.0012	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.01	0.0056	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.868268	NA	NA	NA	NA	NA	NA	NA	3.9944
1253	12	12979025	12979025	G	A	intronic	DDX47	NA	NA	NA	intronic	ENSG00000213782,ENSG00000255661	NA	NA	NA	NA	NA	12p13.1	NA	NA	NA	NA	rs199576460	0.0005	0.0005	NA	0.000399361	0.002	NA	NA	NA	NA	0.0013	NA	NA	NA	0.0014	0.0022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.378356	NA	NA	0.002209	0.000454	NA	NA	NA	3.994391
1253	15	52531941	52531941	A	G	exonic	MYO5C	NA	synonymous SNV	MYO5C:NM_018728:exon21:c.T2692C:p.L898L	exonic	ENSG00000128833	NA	synonymous SNV	ENSG00000128833:ENST00000261839:exon21:c.T2692C:p.L898L	Score=638;Name=lod=522	NA	15q21.2	NA	NA	NA	NA	rs11635028	0.65	0.65	0.633	0.592851	0.9354	0.3085	0.7205	0.5	0.5685	0.94	0.31	0.78	0.49	0.7978	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.146738	NA	NA	0.939113	0.556526	NA	0.667	NA	3.9943536
1253	7	1550455	1550455	C	T	intergenic	INTS1,MAFK	dist=6437;dist=19913	NA	NA	intergenic	ENSG00000231927,ENSG00000198517	dist=1392;dist=19895	NA	NA	NA	NA	7p22.3	NA	Name=TCF12	NA	NA	rs11981930	0.31	0.31	0.297	0.376398	0.339	0.2679	0.4669	0.3759	0.4632	0.28	0.25	0.41	0.35	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.799638	NA	NA	NA	NA	NA	0.246	NA	3.9943334
1253	2	54872343	54872343	T	G	intronic	SPTBN1	NA	NA	NA	intronic	ENSG00000115306	NA	NA	NA	NA	NA	2p16.2	NA	NA	NA	NA	rs77711744	0.01	0.01	0.004	0.00878594	0.002	NA	0.0058	0.0287	NA	NA	NA	0.0028	0.02	0.0034	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.488398	NA	NA	0.000349	0.029959	NA	0.007	NA	3.994251
1253	1	220978682	220978682	C	G	intronic	MARC1	NA	NA	NA	intronic	ENSG00000186205	NA	NA	NA	NA	NA	1q41	NA	NA	NA	NA	rs72472336	0.02	0.02	0.016	0.0241613	0.003	0.0496	0.0043	NA	0.0665	0.0026	0.07	0.0028	NA	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.974757	1.974757	NA	0.002828	0.000723	NA	NA	NA	3.994172
1253	11	103107117	103107117	C	T	intronic	DYNC2H1	NA	NA	NA	intronic	ENSG00000187240	NA	NA	NA	NA	NA	11q22.3	NA	NA	NA	NA	rs78586860	0.01	0.01	0.013	0.013778	0.002	NA	0.0058	0.0477	NA	NA	NA	0.01	0.04	0.0037	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.662918	NA	NA	0.000245	0.040362	NA	0.007	NA	3.994055
1253	20	31830260	31830260	G	C	intronic	BPIFA1	NA	NA	NA	intronic	ENSG00000198183	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs185041484	0.0027	0.0027	NA	0.00119808	0.004	NA	0.0029	NA	NA	0.01	NA	0.01	NA	0.0008	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.304259	NA	NA	0.001163	0	NA	NA	NA	3.994037
1253	19	9346167	9346167	T	C	intergenic	OR7D4,OR7E24	dist=20620;dist=15553	NA	NA	ncRNA_exonic	ENSG00000188314	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs3926918	0.01	0.01	0.005	0.0279553	NA	NA	0.0058	0.1029	NA	NA	NA	0.01	0.06	0.006	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.406066	NA	NA	NA	NA	NA	0.029	NA	3.994
1253	1	25153429	25153429	A	C	intronic	CLIC4	NA	NA	NA	intronic	ENSG00000169504	NA	NA	NA	NA	NA	1p36.11	NA	NA	NA	NA	rs41292295	0.0041	0.0041	0	0.00539137	0.006	NA	0.0058	0.0008	0.0164	0.01	NA	0.01	0.002	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.77966	NA	NA	NA	NA	NA	NA	NA	3.994
1253	1	156145106	156145106	C	G	intronic	SEMA4A	NA	NA	NA	intronic	ENSG00000196189	NA	NA	NA	NA	NA	1q22	NA	NA	NA	NA	rs142383013	0.0014	0.0014	0.002	0.00159744	0.006	NA	0.0014	NA	0.001	0.004	NA	NA	NA	NA	0.004	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.329948	2.329948	NA	NA	NA	NA	NA	NA	3.994
1253	1	158300976	158300976	A	T	intronic	CD1B	NA	NA	NA	intronic	ENSG00000158485	NA	NA	NA	NA	NA	1q23.1	NA	NA	NA	NA	rs148424559	0.0046	0.0046	0.005	0.00339457	0.006	NA	0.0058	0.0023	0.0041	0.01	NA	0.01	0.0041	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.41356	1.41356	NA	NA	NA	NA	NA	NA	3.994
1253	4	99325549	99325549	A	G	intronic	RAP1GDS1	NA	NA	NA	intronic	ENSG00000138698	NA	NA	NA	NA	NA	4q23	NA	NA	NA	NA	rs41275691	0.05	0.05	0.052	0.0646965	0.006	NA	0.0274	0.2133	0.0174	0.01	NA	0.03	0.2	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.603874	NA	NA	NA	NA	NA	0.043	NA	3.994
1253	4	99325877	99325877	G	A	intronic	RAP1GDS1	NA	NA	NA	intronic	ENSG00000138698	NA	NA	NA	NA	NA	4q23	NA	NA	NA	NA	rs10003061	0.04	0.04	0.039	0.0495208	0.006	NA	0.0245	0.1573	0.0174	0.01	NA	0.03	0.15	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.845086	NA	NA	NA	NA	NA	0.029	NA	3.994
1253	4	99357999	99357999	G	T	intronic	RAP1GDS1	NA	NA	NA	intronic	ENSG00000138698	NA	NA	NA	NA	NA	4q23	NA	NA	NA	NA	rs6831386	0.04	0.04	0.043	0.0519169	0.006	NA	0.0245	0.1664	0.0174	0.01	NA	0.03	0.16	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.660921	NA	NA	NA	NA	NA	0.043	NA	3.994
1253	7	117243974	117243974	C	T	intronic	CFTR	NA	NA	NA	intronic	ENSG00000001626	NA	NA	NA	NA	NA	7q31.2	NA	NA	NA	NA	rs149621568	0.0027	0.0027	0.004	0.00179712	0.006	NA	0.0029	NA	0.001	0.01	NA	0.0028	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.7619	NA	NA	NA	NA	NA	NA	NA	3.994
1253	9	15564237	15564237	G	A	intronic	CCDC171	NA	NA	NA	intronic	ENSG00000164989	NA	NA	NA	NA	NA	9p22.3	NA	NA	NA	NA	rs187217145	0.0037	0.0037	NA	0.00219649	0.006	NA	0.0072	NA	NA	0.01	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.808627	NA	NA	NA	NA	NA	NA	NA	3.994
1253	12	49720932	49720932	A	C	intronic	TROAP	NA	NA	NA	intronic	ENSG00000135451	NA	NA	NA	NA	NA	12q13.12	NA	NA	NA	NA	rs34098910	0.04	0.04	0.052	0.053115	0.006	0.001	0.0173	0.1641	0.0307	0.01	NA	0.03	0.16	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.130477	NA	NA	NA	NA	NA	0.072	NA	3.994
1253	17	76089958	76089958	G	A	intronic	TNRC6C	NA	NA	NA	intronic	ENSG00000078687	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs139653937	0.01	0.01	0.003	0.0111821	0.006	0.0069	0.0159	0.0015	0.0307	0.01	0.0035	0.01	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.891641	NA	NA	NA	NA	NA	0.007	NA	3.994
1253	X	2833752	2833752	C	T	intronic	ARSD	NA	NA	NA	intronic	ENSG00000006756	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs115063380	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.006	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.160899	NA	NA	NA	NA	NA	NA	NA	3.994
1253	14	21461253	21461253	G	C	intronic	METTL17	NA	NA	NA	intronic	ENSG00000165792	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs139429771	0.0005	0.0005	0	0.000798722	0.003	NA	0.0014	NA	NA	0.0013	NA	NA	NA	0.0014	0.0019	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.063686	NA	NA	0.00186	0.000227	NA	NA	NA	3.99374
1253	17	5289999	5289999	A	G	intronic	NUP88	NA	NA	NA	intronic	ENSG00000108559	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs61004906	0.02	0.02	0.02	0.0217652	NA	NA	0.0029	0.0809	NA	NA	NA	0.0028	0.08	0.0061	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.992291	NA	NA	0.000233	0.059918	NA	0.051	NA	3.993667
1253	18	57136884	57136884	G	A	intronic	CCBE1	NA	NA	NA	intronic	ENSG00000183287	NA	NA	NA	NA	NA	18q21.32	NA	NA	NA	NA	rs79596673	0.01	0.01	0.012	0.0203674	NA	NA	0.013	0.0703	NA	NA	NA	0.01	0.05	0.0061	0.065	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.272975	NA	NA	0.000233	0.065138	NA	0.014	NA	3.993667
1253	12	12303722	12303722	C	T	intronic	LRP6	NA	NA	NA	intronic	ENSG00000070018,ENSG00000121380	NA	NA	NA	NA	NA	12p13.2	NA	NA	NA	NA	rs148315761	0.0023	0.0023	0.002	0.00119808	0.003	NA	0.0029	0.0008	NA	0.004	NA	0.0028	0.002	0.0014	0.004	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.441467	NA	NA	0.002093	0.000454	NA	NA	NA	3.993507
1253	X	2833749	2833749	T	C	intronic	ARSD	NA	NA	NA	intronic	ENSG00000006756	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs112924969	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0065	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.515506	NA	NA	NA	NA	NA	NA	NA	3.9935
1253	12	31311973	31311973	G	A	intergenic	DDX11,FAM60A	dist=54248;dist=121547	NA	NA	ncRNA_exonic	ENSG00000177359	NA	NA	NA	Score=363;Name=lod=40	NA	12p11.21	NA	NA	NA	NA	rs11502782	0.22	0.22	0.183	0.218251	0.3748	0.119	0.2017	0.1899	0.2096	0.36	0.12	0.2	0.14	0.2908	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.128158	NA	0.01	0.340909	0.190568	NA	0.145	NA	3.993491
1253	10	62551603	62551603	T	G	intronic	CDK1	NA	NA	NA	intronic	ENSG00000170312	NA	NA	NA	NA	NA	10q21.2	NA	NA	NA	NA	rs202194980	0.0014	0.0014	NA	0.000998403	0.003	NA	0.0014	NA	0.001	0.0026	NA	0.0028	NA	0.0022	0.0028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.563789	NA	NA	0.001397	0.000454	NA	NA	NA	3.993403
1253	5	172659511	172659511	C	A	UTR3	NKX2-5	NM_004387:c.*61G>T,NM_001166175:c.*989G>T,NM_001166176:c.*835G>T	NA	NA	UTR3	ENSG00000183072	ENST00000329198:c.*61G>T	NA	NA	NA	NA	5q35.1	NA	NA	NA	NA	rs703752	0.24	0.24	0.228	0.255591	0.34	0.0724	0.2594	0.2511	0.3609	0.33	0.08	0.3	0.24	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.305652	NA	NA	NA	NA	NA	0.275	NA	3.9933334
1253	20	62597694	62597694	T	G	exonic	ZNF512B	NA	synonymous SNV	ZNF512B:NM_020713:exon5:c.A834C:p.V278V	exonic	ENSG00000196700	NA	synonymous SNV	ENSG00000196700:ENST00000217130:exon5:c.A834C:p.V278V,ENSG00000196700:ENST00000369888:exon5:c.A834C:p.V278V,ENSG00000196700:ENST00000450537:exon5:c.A834C:p.V278V	NA	NA	20q13.33	NA	NA	NA	NA	rs817329	0.44	0.44	0.453	0.490415	0.5676	0.0546	0.428	0.7504	0.5532	0.57	0.06	0.43	0.7	0.5354	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.526452	NA	NA	0.570349	0.731502	ID=COSM1130578;OCCURENCE=1(prostate)	0.391	NA	3.9933176
1253	19	9346482	9346482	T	C	intergenic	OR7D4,OR7E24	dist=20935;dist=15238	NA	NA	ncRNA_exonic	ENSG00000188314	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs2015121	0.02	0.02	0.017	0.0279553	NA	NA	0.0058	0.1029	NA	NA	NA	0.01	0.09	0.0067	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.66781	NA	NA	NA	NA	NA	0.029	NA	3.9933
1253	13	37012017	37012017	C	A	intronic	CCNA1	NA	NA	NA	intronic	ENSG00000133101	NA	NA	NA	NA	NA	13q13.3	NA	NA	NA	NA	rs61755284	0.01	0.01	0.01	0.0107827	0.002	NA	0.0072	0.0356	NA	0.0013	NA	0.0028	0.04	0.004	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.093518	NA	NA	0.000814	0.032683	NA	0.007	NA	3.993186
1253	6	170033203	170033203	T	C	intronic	WDR27	NA	NA	NA	intronic	ENSG00000184465	NA	NA	NA	NA	NA	6q27	NA	NA	NA	NA	rs201051132	NA	NA	NA	0.000399361	0.002	NA	NA	NA	NA	NA	NA	NA	NA	0.0018	0.003	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.3573	NA	NA	0.003027	0.000259	NA	NA	NA	3.993173
1253	7	100607851	100607851	C	G	intergenic	ACHE,MUC12	dist=114310;dist=5053	NA	NA	exonic	ENSG00000169894	NA	synonymous SNV	ENSG00000169894:ENST00000422757:exon4:c.C468G:p.L156L,ENSG00000169894:ENST00000319509:exon5:c.C1998G:p.L666L	NA	NA	7q22.1	NA	NA	NA	NA	rs6960854	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5069	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.165855	NA	NA	NA	NA	NA	0.29	NA	3.9931
1253	20	31765901	31765901	T	C	intronic	BPIFA2	NA	NA	NA	intronic	ENSG00000131050	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs8125150	0.03	0.03	0.032	0.0279553	0.005	NA	0.0058	0.0991	NA	0.01	NA	0.01	0.11	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.144527	NA	NA	0.001954	0.089923	NA	0.029	NA	3.993046
1253	5	41153884	41153884	G	T	intronic	C6	NA	NA	NA	intronic	ENSG00000039537	NA	NA	NA	NA	NA	5p13.1	NA	NA	NA	NA	rs143785652	0.0014	0.0014	0.002	0.00199681	0.003	NA	NA	0.0008	0.0061	0.0026	NA	NA	0.002	0.0021	0.0026	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.533524	3.533524	NA	0.00186	0	NA	NA	NA	3.99304
1253	22	42523409	42523409	G	T	intronic	CYP2D6	NA	NA	NA	ncRNA_intronic	ENSG00000237037	NA	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs1985842	0.29	0.29	0.231	NA	NA	NA	NA	NA	NA	0.33	0.24	0.34	0.25	0.3403	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.791786	NA	NA	NA	NA	NA	0.232	NA	3.9930333
1253	2	43927831	43927831	G	A	intronic	PLEKHH2	NA	NA	NA	intronic	ENSG00000152527	NA	NA	NA	NA	NA	2p21	NA	NA	NA	NA	rs113885926	0.04	0.04	0.031	0.0415335	0.007	0.0347	0.036	0.0696	0.0501	0.01	0.02	0.04	0.1	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.906204	NA	NA	NA	NA	NA	0.072	NA	3.993
1253	3	56329979	56329979	A	G	intronic	ERC2	NA	NA	NA	intronic	ENSG00000187672	NA	NA	NA	NA	NA	3p14.3	NA	NA	NA	NA	rs149091960	0.0023	0.0023	0.002	0.00519169	0.007	NA	NA	NA	0.0194	0.01	NA	NA	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.805453	NA	NA	NA	NA	NA	NA	NA	3.993
1253	3	185363485	185363485	G	A	intronic	IGF2BP2	NA	NA	NA	intronic	ENSG00000073792	NA	NA	NA	NA	NA	3q27.2	NA	NA	NA	NA	rs187811147	0.0037	0.0037	NA	0.00159744	0.007	NA	0.0014	NA	NA	0.01	NA	0.0028	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.013777	NA	NA	NA	NA	NA	NA	NA	3.993
1253	5	61790042	61790042	T	C	intronic	IPO11	NA	NA	NA	intronic	ENSG00000086200	NA	NA	NA	NA	NA	5q12.1	NA	NA	NA	NA	rs139009632	0.0027	0.0027	0.004	0.00159744	0.007	NA	0.0014	NA	NA	0.01	NA	NA	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.140874	NA	NA	NA	NA	NA	NA	NA	3.993
1253	10	98675668	98675668	C	T	intronic	LCOR	NA	NA	NA	intronic	ENSG00000196233	NA	NA	NA	NA	NA	10q24.1	NA	NA	NA	NA	rs76461465	0.0023	0.0023	0.003	0.00159744	0.007	NA	NA	0.0008	NA	0.01	NA	NA	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.822411	NA	NA	NA	NA	NA	NA	NA	3.993
1253	14	25326500	25326500	A	T	intronic	STXBP6	NA	NA	NA	intronic	ENSG00000168952	NA	NA	NA	NA	NA	14q12	NA	NA	NA	NA	rs143936014	0.0041	0.0041	0.005	0.00239617	0.007	0.001	0.0058	NA	NA	0.01	0.0017	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.563855	NA	NA	NA	NA	NA	NA	NA	3.993
1253	16	72762554	72762554	G	A	intergenic	PMFBP1,ZFHX3	dist=556205;dist=54232	NA	NA	ncRNA_exonic	ENSG00000261764	NA	NA	NA	NA	NA	16q22.2	NA	NA	NA	NA	rs188012930	0.0027	0.0027	NA	0.00179712	0.007	NA	0.0014	NA	0.001	0.01	NA	0.0028	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.973964	NA	NA	NA	NA	NA	NA	NA	3.993
1253	18	21501608	21501608	C	T	intronic	LAMA3	NA	NA	NA	intronic	ENSG00000053747	NA	NA	NA	NA	NA	18q11.2	NA	NA	NA	NA	rs45523939	0.0032	0.0032	NA	0.00199681	0.007	NA	0.0014	0.0008	0.001	0.01	NA	0.0028	0.002	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.012484	NA	NA	NA	NA	NA	0.007	NA	3.993
1253	21	44535723	44535723	A	T	intergenic	U2AF1,CRYAA	dist=8035;dist=53418	NA	NA	ncRNA_exonic	ENSG00000232777	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs118074764	0.0037	0.0037	0.002	0.00179712	0.007	NA	0.0029	NA	NA	0.01	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.504892	NA	NA	NA	NA	NA	NA	NA	3.993
1253	19	4511140	4511140	C	G	exonic	PLIN4	NA	synonymous SNV	PLIN4:NM_001080400:exon3:c.G2790C:p.G930G	exonic	ENSG00000167676	NA	synonymous SNV	ENSG00000167676:ENST00000301286:exon3:c.G2790C:p.G930G	NA	NA	19p13.3	NA	NA	NA	NA	rs7255715	0.6	0.6	0.599	0.611222	0.5567	0.6577	0.4986	0.6702	0.6196	0.55	0.66	0.54	0.64	0.568	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.101753	NA	NA	0.549024	0.643452	NA	0.507	NA	3.9929426
1253	14	106866810	106866810	C	T	intergenic	LINC00226,LINC00221	dist=121844;dist=71645	NA	NA	splicing	ENSG00000211958	ENST00000390618:exon2:c.46+1G>A	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs73379088	NA	NA	0.188	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.1738	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.052761	NA	NA	NA	NA	NA	0.123	NA	3.9928667
1253	19	9528489	9528489	T	C	intronic	ZNF266	NA	NA	NA	intronic	ENSG00000174652	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs41405044	0.02	0.02	0.023	0.0279553	NA	0.001	0.0058	0.1021	NA	NA	0.0017	0.01	0.1	0.007	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.938064	NA	NA	0.000349	0.074444	NA	0.036	NA	3.992651
1253	2	103414475	103414475	T	C	intronic	TMEM182	NA	NA	NA	intronic	ENSG00000170417	NA	NA	NA	NA	NA	2q12.1	NA	NA	NA	NA	rs57977938	0.02	0.02	0.019	0.0191693	0.001	NA	0.0058	0.0688	NA	NA	NA	0.01	0.07	0.0055	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.261475	NA	NA	0.00093	0.053109	NA	0.029	NA	3.99257
1253	17	5336594	5336594	C	A	intronic	C1QBP	NA	NA	NA	intronic	ENSG00000108561	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs7220640	0.02	0.02	0.021	0.0251597	NA	NA	0.0043	0.093	NA	NA	NA	0.01	0.09	0.0074	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.390708	NA	NA	0.000233	0.073763	NA	0.051	NA	3.992367
1253	3	52259459	52259459	T	C	intronic	TLR9	NA	NA	NA	intronic	ENSG00000173366,ENSG00000239732	NA	NA	NA	NA	NA	3p21.2	NA	NA	NA	NA	rs373979034	NA	NA	NA	0.000399361	0.002	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0057	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.959718	NA	NA	0.005657	0	NA	NA	NA	3.992343
1253	11	5631479	5631479	A	C	intronic	TRIM6,TRIM6-TRIM34	NA	NA	NA	ncRNA_intronic	ENSG00000239920	NA	NA	NA	Score=304;Name=lod=23	NA	11p15.4	NA	NA	NA	NA	rs3740999	0.29	0.29	0.276	0.264976	0.492	0.0427	0.2954	0.2988	0.1933	0.5	0.03	0.33	0.25	0.3721	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.24417	2.24417	NA	0.477193	0.300545	NA	0.326	NA	3.9920403
1253	2	86272643	86272643	A	G	intronic	POLR1A	NA	NA	NA	intronic	ENSG00000068654	NA	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs72847858	0.0041	0.0041	NA	0.00259585	0.008	NA	0.0043	0.0015	NA	0.01	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.520808	1.520808	NA	NA	NA	NA	0.087	NA	3.992
1253	3	75385215	75385215	C	T	intergenic	MIR4444-1,FAM86DP	dist=121516;dist=85488	NA	NA	ncRNA_intronic	ENSG00000228868	NA	NA	NA	NA	NA	3p12.3	NA	NA	NA	NA	rs147772904	0.01	0.01	0.003	0.00499201	0.008	NA	0.0072	0.0015	0.0102	0.01	NA	0.01	0.002	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.995836	NA	NA	NA	NA	NA	NA	NA	3.992
1253	4	17824830	17824830	C	T	intronic	NCAPG	NA	NA	NA	intronic	ENSG00000109805	NA	NA	NA	NA	NA	4p15.31	NA	NA	NA	NA	rs41268413	0.0046	0.0046	0.004	0.00599042	0.008	NA	0.0058	NA	0.0184	0.01	NA	0.0028	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.691367	1.691367	NA	NA	NA	NA	0.007	NA	3.992
1253	4	159642434	159642434	A	G	intronic	PPID	NA	NA	NA	intronic	ENSG00000171497	NA	NA	NA	NA	NA	4q32.1	NA	NA	NA	NA	rs17843891	0.05	0.05	0.057	0.0654952	0.008	0.002	0.0187	0.2209	0.0133	0.01	0.0035	0.01	0.2	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.734747	2.734747	NA	NA	NA	NA	0.072	NA	3.992
1253	5	32397248	32397248	T	C	intronic	ZFR	NA	NA	NA	intronic	ENSG00000056097	NA	NA	NA	NA	NA	5p13.3	NA	NA	NA	NA	rs150395277	0.0037	0.0037	0.003	0.00179712	0.008	NA	0.0014	NA	NA	0.01	NA	0.0028	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.521418	NA	NA	NA	NA	NA	NA	NA	3.992
1253	8	48035119	48035119	C	T	intergenic	LINC00293,LOC100287846	dist=267712;dist=65811	NA	NA	ncRNA_intronic	ENSG00000248347	NA	NA	NA	NA	NA	8q11.1	NA	NA	NA	NA	rs182259055	0.01	0.01	NA	0.00439297	0.008	NA	0.0072	NA	0.0092	0.01	NA	0.02	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.214871	NA	NA	NA	NA	NA	NA	NA	3.992
1253	8	123966379	123966379	G	A	intronic	ZHX2	NA	NA	NA	intronic	ENSG00000178764	NA	NA	NA	NA	NA	8q24.13	NA	NA	NA	NA	rs16897799	0.02	0.02	0.01	0.0191693	0.008	0.0317	0.0519	0.0023	0.0174	0.01	0.03	0.06	0.0041	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.277778	NA	NA	NA	NA	NA	0.022	NA	3.992
1253	9	131568372	131568372	C	A	intronic	TBC1D13	NA	NA	NA	intronic	ENSG00000107021	NA	NA	NA	NA	NA	9q34.11	NA	NA	NA	NA	rs147552518	0.0023	0.0023	0.002	0.00299521	0.008	NA	0.0058	NA	0.0031	0.01	NA	0.0028	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.117215	NA	NA	NA	NA	NA	NA	NA	3.992
1253	9	131750556	131750556	A	T	intronic	NUP188	NA	NA	NA	intronic	ENSG00000095319	NA	NA	NA	NA	NA	9q34.11	NA	NA	NA	NA	rs139177125	0.0027	0.0027	0.003	0.00279553	0.008	NA	0.0058	NA	0.002	0.01	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.640558	NA	NA	NA	NA	NA	NA	NA	3.992
1253	11	93463961	93463961	G	A	upstream;downstream	SNORA25;KIAA1731,SNORA32,SNORD6	NA	NA	NA	UTR3	ENSG00000166012	ENST00000323981:c.*656C>T	NA	NA	NA	NA	11q21	NA	NA	NA	NA	rs61921277	0.01	0.01	0.013	0.0155751	0.008	0.005	0.0231	0.0295	0.0102	0.004	0.01	0.02	0.02	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.178116	NA	NA	NA	NA	NA	0.036	NA	3.992
1253	16	3338382	3338382	G	A	intronic	ZNF263	NA	NA	NA	intronic	ENSG00000006194	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs146378818	0.0032	0.0032	0.003	0.00359425	0.008	NA	0.0101	NA	0.0031	0.01	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.328925	NA	NA	NA	NA	NA	NA	NA	3.992
1253	19	33131423	33131423	T	C	intronic	ANKRD27	NA	NA	NA	intronic	ENSG00000105186	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs28542503	0.13	0.13	0.16	0.151558	0.008	0.0496	0.0432	0.4939	0.0184	0.01	0.06	0.05	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.513176	NA	NA	NA	NA	NA	0.254	NA	3.992
1253	19	43699005	43699005	C	A	intronic	PSG4	NA	NA	NA	intronic	ENSG00000243137	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs144547873	0.0046	0.0046	0.001	0.00379393	0.008	NA	0.0043	0.0053	0.001	0.01	NA	0.01	0.002	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.682172	NA	NA	NA	NA	NA	NA	NA	3.992
1253	20	31812825	31812825	G	A	intronic	BPIFA3	NA	NA	NA	intronic	ENSG00000131059	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs6057770	0.13	0.13	0.16	0.147963	0.008	0.0308	0.036	0.5113	0.001	0.01	0.03	0.04	0.5	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.043933	NA	NA	NA	NA	NA	0.181	NA	3.992
1253	3	16364919	16364919	A	C	exonic	RFTN1	NA	synonymous SNV	RFTN1:NM_015150:exon9:c.T1296G:p.P432P	exonic	ENSG00000131378	NA	synonymous SNV	ENSG00000131378:ENST00000607320:exon2:c.T141G:p.P47P,ENSG00000131378:ENST00000432519:exon8:c.T1188G:p.P396P,ENSG00000131378:ENST00000334133:exon9:c.T1296G:p.P432P	NA	NA	3p25.1	NA	NA	NA	NA	rs690216	0.59	0.59	0.604	0.577276	0.5626	0.5149	0.5375	0.7375	0.4683	0.58	0.49	0.54	0.76	0.5519	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.313796	1.313796	NA	0.560233	0.688153	NA	0.623	NA	3.9919336
1253	11	118509668	118509668	A	G	exonic	PHLDB1	NA	synonymous SNV	PHLDB1:NM_001144758:exon11:c.A2595G:p.E865E,PHLDB1:NM_001144759:exon11:c.A2595G:p.E865E,PHLDB1:NM_015157:exon12:c.A2595G:p.E865E	exonic	ENSG00000019144	NA	synonymous SNV	ENSG00000019144:ENST00000356063:exon11:c.A2595G:p.E865E,ENSG00000019144:ENST00000528594:exon11:c.A2595G:p.E865E,ENSG00000019144:ENST00000361417:exon12:c.A2595G:p.E865E,ENSG00000019144:ENST00000530994:exon12:c.A2595G:p.E865E	NA	NA	11q23.3	NA	NA	NA	NA	rs483598	0.58	0.58	0.58	0.572684	0.5368	0.6558	0.7089	0.4773	0.5562	0.52	0.72	0.65	0.47	0.5861	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.380689	NA	NA	0.552037	0.474534	NA	0.536	NA	3.9917296
1253	9	140006491	140006491	C	T	intronic	DPP7	NA	NA	NA	intronic	ENSG00000176978	NA	NA	NA	NA	NA	9q34.3	NA	Name=CTCF	NA	NA	rs10870180	0.18	0.18	0.196	0.170927	0.3549	0.004	0.2248	0.0363	0.2975	0.36	0.0017	0.26	0.05	0.2855	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.750394	1.750394	NA	0.367907	0.101499	NA	0.283	NA	3.991693
1253	5	148406032	148406032	C	T	intronic	SH3TC2	NA	NA	NA	UTR3	ENSG00000169247	ENST00000513604:c.*2651G>A	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs10075404	0.26	0.26	0.236	0.27476	0.175	0.3264	0.3545	0.2519	0.2986	0.19	0.33	0.31	0.25	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.025942	NA	NA	NA	NA	NA	0.145	NA	3.9916667
1253	1	207143550	207143550	C	T	UTR5	FCAMR	NM_001170631:c.-80G>A,NM_032029:c.-80G>A,NM_001122979:c.-80G>A	NA	NA	UTR5	ENSG00000162897	ENST00000324863:c.-80G>A,ENST00000400962:c.-80G>A,ENST00000324852:c.-80G>A	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs1340232	0.2	0.2	0.189	0.172923	0.1551	0.244	0.1499	0.2141	0.0787	0.16	0.23	0.16	0.24	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.869244	NA	NA	0.186675	0.177023	NA	0.254	NA	3.9915584
1253	8	22415573	22415573	G	A	intronic	SORBS3	NA	NA	NA	intronic	ENSG00000120896	NA	NA	NA	NA	NA	8p21.3	NA	NA	NA	NA	rs10104875	0.09	0.09	0.094	0.111621	0.004	0.1091	0.0331	0.2965	0.0307	0.0013	0.08	0.04	0.28	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.299028	NA	NA	0.004714	0.24711	NA	0.08	NA	3.991286
1253	2	112705187	112705187	G	A	intronic	MERTK	NA	NA	NA	intronic	ENSG00000153208	NA	NA	NA	NA	NA	2q13	NA	NA	NA	NA	rs17042096	0.01	0.01	0.015	0.0165735	0.002	NA	0.013	0.0537	0.001	NA	NA	0.01	0.04	0.0057	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.434325	NA	NA	0.001165	0.037972	NA	0.022	NA	3.991135
1253	2	122208642	122208642	A	T	intronic	CLASP1	NA	NA	NA	intronic	ENSG00000074054	NA	NA	NA	NA	NA	2q14.2	NA	NA	NA	NA	rs149562321	0.0032	0.0032	0.002	0.00239617	0.0089	NA	0.0043	NA	NA	0.01	NA	NA	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.71136	1.71136	NA	NA	NA	NA	NA	NA	3.9911
1253	6	10709075	10709075	A	C	intronic	PAK1IP1	NA	NA	NA	intronic	ENSG00000111845	NA	NA	NA	NA	NA	6p24.2	NA	NA	NA	NA	rs6912993	0.18	0.18	0.195	0.240415	0.0089	0.0377	0.0605	0.7973	0.0624	0.01	0.03	0.05	0.73	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.103447	NA	NA	NA	NA	NA	0.254	NA	3.9911
1253	7	88194530	88194530	G	T	intergenic	STEAP4,ZNF804B	dist=258302;dist=194223	NA	NA	ncRNA_exonic	ENSG00000228928	NA	NA	NA	NA	NA	7q21.12	NA	NA	NA	NA	rs117931259	0.0032	0.0032	0.01	0.00379393	0.0089	NA	0.0058	NA	0.0061	0.01	NA	0.01	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.867887	NA	NA	NA	NA	NA	0.007	NA	3.9911
1253	8	110394584	110394584	A	G	intronic	PKHD1L1	NA	NA	NA	intronic	ENSG00000205038	NA	NA	NA	NA	NA	8q23.1	NA	NA	NA	NA	rs184912452	0.01	0.01	NA	0.00938498	0.0089	NA	0.0159	NA	0.0276	0.01	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.039286	NA	NA	NA	NA	NA	NA	NA	3.9911
1253	8	110439121	110439121	A	G	intronic	PKHD1L1	NA	NA	NA	intronic	ENSG00000205038	NA	NA	NA	NA	NA	8q23.1	NA	NA	NA	NA	rs146559431	0.01	0.01	0.013	0.0157748	0.0089	NA	0.0159	0.0242	0.0276	0.01	NA	0.01	0.02	NA	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.585976	NA	NA	NA	NA	NA	0.022	NA	3.9911
1253	8	110439129	110439129	G	A	intronic	PKHD1L1	NA	NA	NA	intronic	ENSG00000205038	NA	NA	NA	NA	NA	8q23.1	NA	NA	NA	NA	rs139408399	0.01	0.01	0.011	0.0159744	0.0089	NA	0.0159	0.025	0.0276	0.01	NA	0.01	0.02	NA	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.904417	NA	NA	NA	NA	NA	0.022	NA	3.9911
1253	8	125334234	125334234	G	C	intronic	TMEM65	NA	NA	NA	intronic	ENSG00000164983	NA	NA	NA	NA	NA	8q24.13	NA	NA	NA	NA	rs192897855	0.01	0.01	NA	0.00359425	0.0089	NA	0.0014	0.0008	0.0072	0.01	NA	0.0028	0.002	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.39819	NA	NA	NA	NA	NA	0.007	NA	3.9911
1253	11	120980277	120980277	C	T	intronic	TECTA	NA	NA	NA	intronic	ENSG00000109927	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs55885159	0.0027	0.0027	0.002	0.00698882	0.0089	NA	0.0014	NA	0.0256	0.01	NA	0.0028	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.529994	NA	NA	NA	NA	NA	NA	NA	3.9911
1253	21	47859926	47859926	C	T	intronic	PCNT	NA	NA	NA	intronic	ENSG00000160299	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs117926177	0.0041	0.0041	0.003	0.00279553	0.0089	NA	0.0043	NA	0.002	0.01	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.912844	NA	NA	NA	NA	NA	NA	NA	3.9911
1253	2	233721455	233721455	G	A	intronic	GIGYF2	NA	NA	NA	intronic	ENSG00000204120	NA	NA	NA	NA	NA	2q37.1	NA	Name=JunD,Pol2-4H8,Max,CEBPB,TBP,p300_(N-15)	Name=79	NA	rs1947105	0.71	0.71	0.723	0.640176	0.7127	0.6448	0.6945	0.761	0.3589	0.72	0.68	0.71	0.74	0.646	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.382866	NA	NA	0.650233	0.737177	NA	0.696	NA	3.991067
1253	14	101429459	101429459	G	C	ncRNA_exonic	SNORD114-7	NA	NA	NA	ncRNA_exonic	ENSG00000199390	NA	NA	NA	NA	NA	14q32.31	NA	NA	NA	NA	rs72700530	0.13	0.13	0.118	0.105431	0.2455	0.0605	0.1383	0.0106	0.1125	0.24	0.06	0.17	0.01	0.1742	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.056947	NA	NA	0.255902	0.057078	NA	0.225	NA	3.9910646
1253	5	139892380	139892380	C	T	intronic	ANKHD1,ANKHD1-EIF4EBP3	NA	NA	NA	intronic	ENSG00000131503,ENSG00000254996	NA	NA	NA	NA	NA	5q31.3	NA	NA	NA	NA	rs185656503	0.0018	0.0018	NA	0.000599042	0.003	NA	NA	NA	NA	0.01	NA	NA	NA	0.0036	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.134189	NA	NA	0.002444	0.000227	NA	0.007	NA	3.990956
1253	2	97278187	97278187	G	A	intronic	KANSL3	NA	NA	NA	intronic	ENSG00000114982	NA	NA	NA	NA	NA	2q11.2	NA	NA	NA	NA	rs199948436	0.0005	0.0005	NA	0.00139776	0.002	NA	0.0043	NA	0.002	0.0013	NA	NA	NA	0.0027	0.0044	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.367904	NA	NA	0.00443	0.000493	NA	NA	NA	3.99087
1253	3	9908749	9908749	G	C	UTR3	CIDEC	NM_001199623:c.*69C>G,NM_001199552:c.*69C>G,NM_001199551:c.*69C>G,NM_022094:c.*69C>G	NA	NA	UTR3	ENSG00000187288	ENST00000423850:c.*69C>G,ENST00000455015:c.*69C>G,ENST00000336832:c.*69C>G,ENST00000383817:c.*37C>G,ENST00000430427:c.*69C>G,ENST00000443115:c.*37C>G	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs1053239	0.24	0.24	0.198	0.21905	0.1541	0.5933	0.1686	0.0061	0.2239	0.16	0.59	0.15	0.01	0.1884	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.470851	NA	NA	NA	NA	NA	0.167	NA	3.9908334
1253	7	101844632	101844632	C	T	intronic	CUX1	NA	NA	NA	intronic	ENSG00000257923	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs201396561	0.0009	0.0009	NA	0.000798722	0.004	NA	NA	NA	NA	0.0026	NA	NA	NA	0.0018	0.0035	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.196442	NA	NA	0.003489	0.000454	NA	NA	NA	3.990711
1253	2	133541444	133541444	T	C	exonic	NCKAP5	NA	synonymous SNV	NCKAP5:NM_207363:exon14:c.A2940G:p.P980P	exonic	ENSG00000176771	NA	synonymous SNV	ENSG00000176771:ENST00000317721:exon12:c.A2940G:p.P980P,ENSG00000176771:ENST00000409261:exon14:c.A2940G:p.P980P	NA	NA	2q21.2	NA	NA	NA	NA	rs12691829	0.71	0.71	0.724	0.717452	0.5219	0.871	0.6729	0.851	0.6115	0.52	0.89	0.64	0.85	0.6114	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.635143	NA	NA	0.542732	0.816516	NA	0.746	NA	3.9906346
1253	19	35510504	35510504	A	G	intronic	GRAMD1A	NA	NA	NA	ncRNA_intronic	ENSG00000271032	NA	NA	NA	NA	NA	19q13.12	NA	NA	NA	NA	rs68162641	0.25	0.25	0.241	0.205072	0.3429	0.2173	0.2896	0.0961	0.138	0.34	0.2	0.3	0.11	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.343358	NA	NA	NA	NA	NA	0.232	NA	3.9904333
1253	6	107103621	107103621	T	G	intronic	QRSL1	NA	NA	NA	intronic	ENSG00000130348	NA	NA	NA	NA	NA	6q21	NA	NA	NA	NA	rs146640596	0.0009	0.0009	0.001	0.00199681	0.004	NA	NA	NA	0.0061	0.0026	NA	NA	NA	0.003	0.0028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.694	NA	NA	0.002791	0.000454	NA	NA	NA	3.990209
1253	6	160482513	160482513	G	A	intronic	IGF2R	NA	NA	NA	intronic	ENSG00000197081	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs55987231	0.0014	0.0014	NA	0.00199681	0.001	NA	0.0086	0.0023	NA	NA	NA	0.01	NA	0.0028	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.696118	NA	NA	0.006047	0.001135	NA	NA	NA	3.990153
1253	1	12320949	12320949	T	G	intronic	VPS13D	NA	NA	NA	intronic	ENSG00000048707	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs6657877	0.04	0.04	0.039	0.0427316	0.0099	NA	0.0173	0.1392	0.0082	0.01	NA	0.02	0.14	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.46411	NA	NA	NA	NA	NA	0.043	NA	3.9901
1253	1	12371807	12371807	G	A	intronic	VPS13D	NA	NA	NA	intronic	ENSG00000048707	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs17037975	0.02	0.02	0.018	0.0215655	0.0099	0.001	0.0144	0.0582	0.0102	0.01	0.0017	0.02	0.07	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.944472	NA	NA	NA	NA	NA	0.014	NA	3.9901
1253	6	44390290	44390290	A	G	intronic	CDC5L	NA	NA	NA	intronic	ENSG00000096401	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs11572005	0.01	0.01	0.013	0.00898562	0.0099	NA	0.013	0.0189	0.001	0.01	NA	0.01	0.01	NA	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.476085	NA	NA	NA	NA	NA	0.022	NA	3.9901
1253	6	49703378	49703378	T	C	intronic	CRISP3	NA	NA	NA	intronic	ENSG00000096006	NA	NA	NA	NA	NA	6p12.3	NA	NA	NA	NA	rs62413629	0.01	0.01	0.005	0.00399361	0.0099	NA	0.0043	NA	0.0072	0.01	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.171747	NA	NA	NA	NA	NA	NA	NA	3.9901
1253	10	37284092	37284092	G	A	intergenic	FZD8,ANKRD30A	dist=1353730;dist=130693	NA	NA	ncRNA_exonic	ENSG00000225355	NA	NA	NA	NA	NA	10p11.21	NA	NA	NA	NA	rs73238701	0.04	0.04	0.049	0.0515176	0.0099	NA	0.0159	0.1793	NA	0.01	NA	0.01	0.16	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.26411	NA	NA	NA	NA	NA	0.043	NA	3.9901
1253	11	120973516	120973516	C	T	intronic	TECTA	NA	NA	NA	intronic	ENSG00000109927	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs56358414	0.03	0.03	0.032	0.0411342	0.0099	NA	0.0101	0.1248	0.0245	0.01	NA	0.0028	0.12	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.037872	2.037872	NA	NA	NA	NA	0.036	NA	3.9901
1253	12	1992265	1992265	G	T	intronic	CACNA2D4	NA	NA	NA	intronic	ENSG00000151062	NA	NA	NA	NA	NA	12p13.33	NA	NA	NA	NA	rs79864920	0.05	0.05	0.055	0.0636981	0.0099	0.0099	0.0187	0.174	0.0573	0.01	0.02	0.02	0.17	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.400045	NA	NA	NA	NA	NA	0.029	NA	3.9901
1253	15	42438508	42438508	C	T	intronic	PLA2G4F	NA	NA	NA	intronic	ENSG00000168907	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs116962748	0.01	0.01	0.005	0.00419329	0.0099	NA	0.0086	NA	0.0051	0.01	NA	0.01	0.002	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.526378	NA	NA	NA	NA	NA	0.014	NA	3.9901
1253	17	38910521	38910521	A	G	intronic	KRT25	NA	NA	NA	intronic	ENSG00000204897	NA	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs141167201	0.0046	0.0046	0.003	0.00419329	0.0099	NA	0.0159	NA	NA	0.01	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.047246	NA	NA	NA	NA	NA	NA	NA	3.9901
1253	20	23666675	23666675	A	T	intronic	CST4	NA	NA	NA	intronic	ENSG00000101441	NA	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	rs193005225	0.01	0.01	NA	0.00359425	0.0099	NA	0.0101	NA	0.001	0.01	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.106914	NA	NA	NA	NA	NA	NA	NA	3.9901
1253	21	46696834	46696834	C	T	intronic	POFUT2	NA	NA	NA	intronic	ENSG00000186866	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs111476409	0.01	0.01	0.005	0.00299521	0.0099	NA	0.0043	NA	0.002	0.01	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.230777	NA	NA	NA	NA	NA	NA	NA	3.9901
1253	19	38847208	38847208	C	T	intronic	CATSPERG	NA	NA	NA	intronic	ENSG00000099338	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs184862901	0.0023	0.0023	NA	0.00179712	0.004	NA	0.0058	NA	0.001	0.0026	NA	0.01	NA	0.0024	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.551335	NA	NA	0.003605	0.000227	NA	0.007	NA	3.989995
1253	19	49519873	49519873	G	C	exonic	LHB	NA	synonymous SNV	LHB:NM_000894:exon2:c.C114G:p.V38V	exonic	ENSG00000104826	NA	synonymous SNV	ENSG00000104826:ENST00000221421:exon2:c.C114G:p.V38V	NA	NA	19q13.33	NA	NA	NA	NA	rs6521	0.49	0.49	0.391	0.493011	0.5835	0.3343	0.6081	0.4569	0.5307	0.58	0.33	0.57	0.47	0.5525	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.250067	NA	NA	0.540698	0.441443	NA	0.565	NA	3.9899686
1253	1	155755198	155755198	T	G	intronic	GON4L	NA	NA	NA	intronic	ENSG00000116580	NA	NA	NA	NA	NA	1q22	NA	NA	NA	NA	rs41409345	0.02	0.02	0.026	0.0341454	NA	0.001	0.0043	0.1104	0.0215	NA	NA	0.01	0.09	0.0098	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.093267	NA	NA	0.000233	0.065138	NA	0.029	NA	3.989967
1253	8	23159724	23159724	A	G	intronic	LOXL2	NA	NA	NA	intronic	ENSG00000134013	NA	NA	NA	NA	NA	8p21.3	NA	NA	NA	NA	rs201185197	0.0009	0.0009	NA	0.000599042	0.001	NA	0.0014	0.0008	NA	0.0013	NA	0.0028	NA	0.003	0.006	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.631865	NA	NA	0.006047	0.001362	NA	NA	NA	3.989953
1253	2	177193557	177193557	C	T	intronic	MTX2	NA	NA	NA	intronic	ENSG00000128654	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	rs146164822	0.0023	0.0023	0.002	0.00139776	0.004	NA	0.0029	0.0008	NA	0.004	NA	0.0028	0.002	0.0029	0.004	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.976884	2.976884	NA	0.003257	0.000681	NA	NA	NA	3.989843
1253	8	42938367	42938367	G	C	intronic	FNTA	NA	NA	NA	intronic	ENSG00000168522	NA	NA	NA	NA	NA	8p11.21	NA	NA	NA	NA	rs199935323	0.0009	0.0009	NA	0.000998403	0.004	NA	0.0014	NA	NA	0.0026	NA	NA	NA	0.0025	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.422609	NA	NA	0.003721	0	NA	0.007	NA	3.989779
1253	11	838110	838110	C	T	intronic	CD151	NA	NA	NA	intronic	ENSG00000177697,ENSG00000177700	NA	NA	NA	NA	NA	11p15.5	NA	Name=ZNF263	Name=6	NA	rs5030780	0.71	0.71	0.67	0.641573	0.663	0.8552	0.7925	0.5295	0.4438	0.67	0.89	0.78	0.52	0.6697	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.24358	NA	NA	0.677682	0.549705	NA	0.594	NA	3.989618
1253	20	36855524	36855524	T	C	intronic	KIAA1755	NA	NA	NA	intronic	ENSG00000149633	NA	NA	NA	NA	NA	20q11.23	NA	NA	NA	NA	rs76226431	0.02	0.02	0.019	0.0249601	0.001	0.0427	0.0058	0.0552	0.0041	NA	0.04	0.01	0.05	0.0092	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.460611	NA	NA	0.000349	0.041761	NA	0.007	NA	3.989451
1253	X	52891645	52891645	A	G	UTR3	XAGE3	NM_130776:c.*2T>C,NM_133179:c.*2T>C	NA	NA	UTR3	ENSG00000171402	ENST00000346279:c.*2T>C,ENST00000375491:c.*2T>C	NA	NA	NA	NA	Xp11.22	NA	NA	NA	NA	rs75808475	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3439	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.13362	NA	NA	NA	NA	ID=COSN215910;OCCURENCE=1(central_nervous_system)	0.014	NA	3.9894334
1253	1	53261875	53261875	T	A	intronic	ZYG11B	NA	NA	NA	intronic	ENSG00000162378	NA	NA	NA	NA	NA	1p32.3	NA	NA	NA	NA	rs145784476	0.01	0.01	0.006	0.0081869	0.0109	NA	0.0231	0.0091	0.002	0.01	NA	0.03	0.01	NA	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.607667	NA	NA	NA	NA	NA	0.029	NA	3.9891
1253	1	149907919	149907919	C	T	intronic	MTMR11	NA	NA	NA	intronic	ENSG00000014914	NA	NA	NA	NA	NA	1q21.2	NA	NA	NA	NA	rs61807548	0.01	0.01	0.006	0.00479233	0.0109	NA	0.0043	NA	0.0102	0.01	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.264075	NA	NA	NA	NA	NA	0.014	NA	3.9891
1253	3	51456076	51456076	G	C	intronic	VPRBP	NA	NA	NA	intronic	ENSG00000145041	NA	NA	NA	NA	NA	3p21.2	NA	NA	NA	NA	rs146589103	0.01	0.01	0.006	0.00439297	0.0109	NA	0.0101	0.0008	0.0031	0.01	NA	0.01	0.0041	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.664963	NA	NA	NA	NA	NA	NA	NA	3.9891
1253	3	169548535	169548535	C	A	intronic	LRRIQ4	NA	NA	NA	intronic	ENSG00000188306	NA	NA	NA	NA	NA	3q26.2	NA	NA	NA	NA	rs58497965	0.09	0.09	0.093	0.0778754	0.0109	0.3026	0.0793	0.0015	0.0174	0.01	0.3	0.06	0.002	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.220242	NA	NA	NA	NA	NA	0.043	NA	3.9891
1253	7	42836505	42836505	T	C	intergenic	GLI3,C7orf25	dist=559887;dist=112367	NA	NA	ncRNA_intronic	ENSG00000229161	NA	NA	NA	NA	NA	7p14.1	NA	NA	NA	NA	rs141749281	0.04	0.04	0.04	0.0505192	0.0109	NA	0.0202	0.1725	NA	0.0013	NA	0.03	0.17	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.505092	NA	NA	NA	NA	NA	0.043	NA	3.9891
1253	7	101844528	101844528	G	A	intronic	CUX1	NA	NA	NA	intronic	ENSG00000257923	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs117206331	0.0027	0.0027	0	0.00219649	0.0109	NA	NA	NA	NA	0.01	NA	NA	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.31272	NA	NA	NA	NA	NA	NA	NA	3.9891
1253	13	34404768	34404768	A	T	intronic	RFC3	NA	NA	NA	intronic	ENSG00000133119	NA	NA	NA	NA	NA	13q13.2	NA	NA	NA	NA	rs3135601	0.03	0.03	0.026	0.0415335	0.0109	0.0327	0.0231	0.0643	0.0644	0.01	0.02	0.02	0.05	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.152361	NA	NA	NA	NA	NA	0.036	NA	3.9891
1253	16	77775917	77775917	A	G	UTR3	NUDT7	NM_001243661:c.*70A>G,NM_001243660:c.*70A>G,NM_001243657:c.*368A>G,NM_001105663:c.*70A>G	NA	NA	ncRNA_exonic	ENSG00000261707	NA	NA	NA	NA	NA	16q23.1	NA	NA	NA	NA	rs1133108	0.36	0.36	0.335	0.325679	0.5109	0.2897	0.3718	0.177	0.3405	0.52	0.29	0.39	0.17	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.5279	NA	NA	NA	NA	NA	0.312	NA	3.9891
1253	17	73698481	73698481	G	C	intronic	SAP30BP	NA	NA	NA	intronic	ENSG00000161526	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs6501830	0.19	0.19	0.191	0.221645	0.0109	0.3482	0.2089	0.3011	0.2096	0.01	0.39	0.16	0.26	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.279026	NA	NA	NA	NA	NA	0.13	NA	3.9891
1253	19	30099428	30099428	T	C	intronic	POP4	NA	NA	NA	intronic	ENSG00000105171	NA	NA	NA	NA	NA	19q12	NA	NA	NA	NA	rs112237621	0.03	0.03	0.031	0.0465256	0.0109	0.0069	0.0274	0.0666	0.1104	0.01	NA	0.04	0.1	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.645337	NA	NA	NA	NA	NA	0.022	NA	3.9891
1253	1	67592840	67592840	G	A	intronic	C1orf141	NA	NA	NA	intronic	ENSG00000203963	NA	NA	NA	NA	NA	1p31.3	NA	NA	NA	NA	rs7525652	0.03	0.03	0.029	0.0313498	0.001	0.0089	0.0058	0.1082	NA	NA	0.01	0.01	0.09	0.0095	0.093	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.618225	1.618225	NA	0.000582	0.092643	NA	0.029	NA	3.988918
1253	17	33687420	33687420	C	A	intronic	SLFN11	NA	NA	NA	intronic	ENSG00000172716	NA	NA	NA	NA	NA	17q12	NA	NA	NA	NA	rs141261472	0.0032	0.0032	0.003	0.00319489	0.005	NA	0.0072	0.0045	NA	0.004	NA	0.01	0.002	0.0031	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.368977	NA	NA	0.003023	0.002952	NA	NA	NA	3.988877
1253	7	36492212	36492212	C	T	UTR3	ANLN	NM_018685:c.*3C>T	NA	NA	UTR3	ENSG00000011426	ENST00000265748:c.*3C>T,ENST00000396068:c.*3C>T	NA	NA	NA	NA	7p14.2	NA	NA	NA	NA	rs2052197	0.12	0.12	0.11	0.13099	0.1004	0.1875	0.1715	0.0915	0.1288	0.11	0.16	0.14	0.09	0.129	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.397609	NA	NA	0.115233	0.103268	NA	0.167	NA	3.9887004
1253	16	19034406	19034406	A	C	intronic	TMC7	NA	NA	NA	intronic	ENSG00000170537	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs117741115	0.0014	0.0014	0.001	0.00279553	0.004	NA	NA	NA	0.0102	0.004	NA	NA	NA	0.0041	0.004	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.470625	NA	NA	0.003256	0	NA	NA	NA	3.988644
1253	1	151679900	151679900	C	T	intronic	CELF3	NA	NA	NA	ncRNA_intronic	ENSG00000227045	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs10888428	0.47	0.47	0.447	0.511781	0.3449	0.6359	0.5317	0.4902	0.5706	0.34	0.61	0.51	0.5	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.307006	NA	NA	NA	NA	NA	0.522	NA	3.9884333
1253	5	138356756	138356756	G	A	intronic	SIL1	NA	NA	NA	ncRNA_intronic	ENSG00000249593	NA	NA	NA	NA	NA	5q31.2	NA	NA	NA	NA	rs10077896	0.36	0.36	0.359	0.372404	0.3449	0.1558	0.3833	0.5908	0.3211	0.35	0.15	0.41	0.57	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.188637	NA	NA	NA	NA	NA	0.37	NA	3.9884333
1253	17	39580816	39580816	G	C	UTR5	KRT37	NM_003770:c.-41C>G	NA	NA	ncRNA_exonic	ENSG00000234859	NA	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs72485487	0.17	0.17	0.146	0.172324	0.1759	0.3224	0.1268	0.034	0.2331	0.18	0.31	0.13	0.04	0.1614	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.413601	NA	NA	0.174465	0.053734	NA	0.109	NA	3.988235
1253	9	19063786	19063786	T	C	intronic	HAUS6	NA	NA	NA	intronic	ENSG00000147874	NA	NA	NA	NA	NA	9p22.1	NA	NA	NA	NA	rs145055829	0.0018	0.0018	0.002	0.00219649	0.006	NA	NA	NA	0.0051	0.01	NA	NA	NA	0.0026	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.631317	2.631317	NA	0.003265	0.000571	NA	NA	NA	3.988135
1253	16	10775826	10775826	G	A	intronic	TEKT5	NA	NA	NA	intronic	ENSG00000153060	NA	NA	NA	NA	NA	16p13.13	NA	NA	NA	NA	rs147251977	0.0018	0.0018	0.002	0.00219649	0.006	NA	0.0058	NA	0.001	0.004	NA	0.0028	NA	0.0025	0.004	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.419687	NA	NA	0.003372	0.000683	NA	NA	NA	3.988128
1253	1	37335237	37335237	C	T	intronic	GRIK3	NA	NA	NA	intronic	ENSG00000163873	NA	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	rs143263603	0.01	0.01	0.005	0.00459265	0.0119	NA	0.013	0.0015	NA	0.01	NA	0.02	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.906945	1.906945	NA	NA	NA	NA	NA	NA	3.9881
1253	1	166973358	166973358	C	T	intronic	MAEL	NA	NA	NA	intronic	ENSG00000143194	NA	NA	NA	NA	NA	1q24.1	NA	NA	NA	NA	rs12567885	0.09	0.09	0.081	0.0752796	0.0119	0.2688	0.049	0.0008	0.0603	0.02	0.31	0.04	0.002	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.383696	NA	NA	NA	NA	NA	0.051	NA	3.9881
1253	4	148440907	148440907	A	C	intronic	EDNRA	NA	NA	NA	intronic	ENSG00000151617	NA	NA	NA	NA	NA	4q31.22	NA	NA	NA	NA	rs10305899	0.01	0.01	0.005	0.00439297	0.0119	NA	0.013	NA	0.001	0.01	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.602983	NA	NA	NA	NA	NA	0.051	NA	3.9881
1253	6	13794033	13794033	A	G	intronic	MCUR1	NA	NA	NA	intronic	ENSG00000050393	NA	NA	NA	NA	NA	6p23	NA	NA	NA	NA	rs72831080	0.0046	0.0046	0.004	0.00239617	0.0119	NA	NA	NA	NA	0.01	NA	NA	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.585622	NA	NA	NA	NA	NA	0.058	NA	3.9881
1253	11	63006411	63006411	A	G	intergenic	SLC22A25,MIR3680-1	dist=9287;dist=8210	NA	NA	ncRNA_exonic	ENSG00000256863	NA	NA	NA	NA	NA	11q12.3	NA	NA	NA	NA	rs188854640	0.0032	0.0032	NA	0.00319489	0.0119	NA	0.0058	NA	NA	0.01	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.150664	NA	NA	NA	NA	NA	NA	NA	3.9881
1253	1	26080112	26080112	A	G	intronic	MAN1C1	NA	NA	NA	intronic	ENSG00000117643	NA	NA	NA	NA	NA	1p36.11	NA	NA	NA	NA	rs202190357	0.0009	0.0009	NA	0.000998403	0.004	NA	0.0014	NA	NA	0.0026	NA	NA	NA	0.0033	0.0048	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.65431	NA	NA	0.004767	0.001135	NA	NA	NA	3.987933
1253	11	842543	842543	C	G	upstream	POLR2L,TSPAN4	NA	NA	NA	UTR5	ENSG00000177700	ENST00000322028:c.-35G>C	NA	NA	NA	NA	11p15.5	NA	Name=Oct-2,RXRA,POU2F2,TAF1,ETS1,E2F6_(H-50),YY1_(C-20),TAF7_(SQ-8),Pol2,SP1,Pol2(phosphoS2),c-Myc,BCL3,HEY1,NFKB,TBP,IRF1,TCF12,Pol2(b),Sin3Ak-20,Pol2-4H8,YY1	Name=145	NA	rs28372895	0.68	0.68	0.643	0.642971	0.664	0.8571	0.7925	0.5356	0.4397	0.63	0.87	0.74	0.51	0.6722	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.110551	NA	NA	0.675915	0.549954	NA	NA	NA	3.987885
1253	10	115417289	115417289	G	A	exonic	NRAP	NA	synonymous SNV	NRAP:NM_001261463:exon4:c.C300T:p.H100H,NRAP:NM_006175:exon4:c.C300T:p.H100H,NRAP:NM_198060:exon4:c.C300T:p.H100H	exonic	ENSG00000197893	NA	synonymous SNV	ENSG00000197893:ENST00000359988:exon4:c.C300T:p.H100H,ENSG00000197893:ENST00000360478:exon4:c.C300T:p.H100H,ENSG00000197893:ENST00000369358:exon4:c.C300T:p.H100H,ENSG00000197893:ENST00000369360:exon4:c.C300T:p.H100H	Score=477;Name=lod=116	NA	10q25.3	NA	NA	NA	NA	rs1891762	0.88	0.88	0.876	0.876597	0.8917	0.9038	0.9092	0.8071	0.9039	0.89	0.92	0.9	0.81	0.8949	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.917879	NA	NA	0.892326	0.819791	NA	0.913	NA	3.9877406
1253	5	138356775	138356775	C	A	intronic	SIL1	NA	NA	NA	ncRNA_intronic	ENSG00000249593	NA	NA	NA	NA	NA	5q31.2	NA	NA	NA	NA	rs10077796	0.42	0.42	0.443	0.437899	0.3459	0.1845	0.3905	0.8109	0.3231	0.36	0.19	0.41	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.948623	NA	NA	NA	NA	NA	0.449	NA	3.9874333
1253	11	2416293	2416293	A	G	intronic	CD81	NA	NA	NA	intronic	ENSG00000110651	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs11820341	0.02	0.02	0.028	0.0329473	0.002	NA	0.0101	0.118	NA	NA	NA	0.01	0.1	0.0099	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.915494	NA	NA	0.000698	0.098137	NA	0.014	NA	3.987402
1253	8	22051512	22051512	G	A	intronic	BMP1	NA	NA	NA	intronic	ENSG00000168487	NA	NA	NA	NA	NA	8p21.3	NA	NA	NA	NA	rs142176786	0.01	0.01	0.007	0.0103834	0.0129	NA	0.0058	0.003	0.0317	0.01	NA	0.01	0.01	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.859045	NA	NA	NA	NA	NA	NA	NA	3.9871
1253	10	104569567	104569567	C	A	intronic	WBP1L	NA	NA	NA	intronic	ENSG00000166272	NA	NA	NA	NA	NA	10q24.32	NA	NA	NA	NA	rs687541	0.01	0.01	0.006	0.00419329	0.0129	NA	0.0058	0.0008	0.0031	0.01	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.254693	NA	NA	NA	NA	NA	NA	NA	3.9871
1253	11	116827565	116827565	A	G	intronic	SIK3	NA	NA	NA	intronic	ENSG00000160584	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs587703	0.06	0.06	0.058	0.0686901	0.0129	0.0804	0.0418	0.1384	0.0389	0.01	0.07	0.04	0.14	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.856888	NA	NA	NA	NA	NA	0.058	NA	3.9871
1253	17	73552348	73552348	C	T	intronic	LLGL2	NA	NA	NA	intronic	ENSG00000073350	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs62089184	0.0046	0.0046	0.004	0.00479233	0.0129	NA	0.0086	0.003	0.001	0.01	NA	0.01	0.0041	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.01382	NA	NA	NA	NA	NA	NA	NA	3.9871
1253	19	2247086	2247086	C	T	intronic	SF3A2	NA	NA	NA	intronic	ENSG00000104897	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs59357019	0.08	0.08	0.067	0.0890575	0.0129	0.1151	0.0576	0.1664	0.0583	0.01	0.13	0.06	0.16	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.151461	NA	NA	NA	NA	NA	0.065	NA	3.9871
1253	19	15075281	15075281	A	C	intronic	SLC1A6	NA	NA	NA	intronic	ENSG00000105143	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs147579087	0.01	0.01	0.006	0.00439297	0.0129	NA	0.0101	NA	0.002	0.01	NA	0.01	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.068231	NA	NA	NA	NA	NA	0.014	NA	3.9871
1253	21	47616210	47616210	T	C	intronic	LSS	NA	NA	NA	intronic	ENSG00000160285	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs186230840	0.0027	0.0027	NA	0.00199681	0.005	NA	0.0043	0.0008	0.001	0.0026	NA	0.01	0.002	0.0034	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.145307	NA	NA	0.004651	0.001362	NA	NA	NA	3.986949
1253	17	10538146	10538146	G	A	intronic	MYH3	NA	NA	NA	intronic	ENSG00000109063	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs150348272	0.0037	0.0037	0.005	0.00379393	0.003	NA	0.0072	0.003	0.0072	0.004	NA	0.01	0.0041	0.0051	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.59207	NA	NA	0.005	0.003177	NA	NA	NA	3.9869
1253	6	32523260	32523260	C	T	ncRNA_intronic	HLA-DRB6	NA	NA	NA	ncRNA_intronic	ENSG00000229391	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs34720636	NA	NA	0.52	0.697883	0.6799	0.6964	0.7392	0.7405	0.6309	NA	NA	NA	NA	NA	0.065	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.049612	NA	NA	NA	NA	NA	0.072	NA	3.9867666
1253	7	34790123	34790123	T	C	ncRNA_intronic	NPSR1-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000230356	NA	NA	NA	NA	NA	7p14.3	NA	NA	NA	NA	rs324396	0.71	0.71	0.715	0.730431	0.6799	0.5565	0.6484	0.9735	0.6912	0.68	0.56	0.7	0.94	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.258557	NA	NA	NA	NA	NA	0.681	NA	3.9867666
1253	1	89420825	89420825	A	C	intronic	CCBL2	NA	NA	NA	intronic	ENSG00000137944	NA	NA	NA	NA	NA	1p22.2	NA	NA	NA	NA	rs12095620	0.03	0.03	0.028	0.0383387	0.002	NA	0.0159	0.1354	NA	0.0026	NA	0.02	0.1	0.0107	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.58418	1.58418	NA	0.000581	0.098956	NA	0.029	NA	3.986719
1253	11	17537720	17537720	G	A	intronic	USH1C	NA	NA	NA	intronic	ENSG00000006611	NA	NA	NA	NA	NA	11p15.1	NA	NA	NA	NA	rs150028032	0.0018	0.0018	0.003	0.00159744	0.007	NA	0.0014	NA	NA	0.004	NA	0.0028	NA	NA	0.0063	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.670505	NA	NA	0.006285	0.002168	NA	NA	NA	3.986715
1253	12	18234097	18234097	T	C	UTR3	RERGL	NM_024730:c.*28A>G	NA	NA	UTR3	ENSG00000111404	ENST00000229002:c.*28A>G,ENST00000538724:c.*28A>G	NA	NA	NA	NA	12p12.3	NA	NA	NA	NA	rs941047	0.06	0.06	0.046	0.0585064	0.1322	0.003	0.0735	0.0121	0.092	0.11	0.0035	0.09	0.01	0.0939	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.391592	NA	NA	0.120638	0.039946	NA	0.152	NA	3.9865954
1253	7	143095400	143095400	A	T	intronic	EPHA1	NA	NA	NA	intronic	ENSG00000146904	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs77324371	0.01	0.01	0.009	0.0115815	0.005	NA	0.0115	0.034	NA	0.0026	NA	0.01	0.03	0.0056	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.278879	3.278879	NA	0.003256	0.023831	NA	NA	NA	3.986144
1253	19	39688901	39688901	G	T	intronic	NCCRP1	NA	NA	NA	intronic	ENSG00000188505	NA	NA	NA	NA	NA	19q13.2	NA	Name=CTCF	NA	NA	rs12610093	0.38	0.38	0.383	0.366214	0.3231	0.4196	0.3429	0.3797	0.3538	0.31	0.48	0.41	0.35	0.3574	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.140372	NA	NA	0.333372	0.390377	NA	0.384	NA	3.986128
1253	8	39467095	39467095	T	C	intronic	ADAM18	NA	NA	NA	intronic	ENSG00000168619	NA	NA	NA	NA	NA	8p11.22	NA	NA	NA	NA	rs79414226	0.02	0.02	0.024	0.0183706	0.004	NA	0.0303	0.0507	NA	0.004	NA	0.04	0.06	0.0078	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.198349	NA	NA	0.002094	0.043804	NA	0.014	NA	3.986106
1253	1	3410229	3410229	G	A	intronic	MEGF6	NA	NA	NA	intronic	ENSG00000162591	NA	NA	NA	NA	NA	1p36.32	NA	NA	NA	NA	rs185310228	0.01	0.01	NA	0.00499201	0.0139	NA	0.0072	NA	0.0061	0.01	NA	0.01	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.302521	NA	NA	NA	NA	NA	0.007	NA	3.9861
1253	1	174200604	174200604	T	C	intronic	RABGAP1L	NA	NA	NA	intronic	ENSG00000152061	NA	NA	NA	NA	NA	1q25.1	NA	NA	NA	NA	rs111939002	0.01	0.01	0.004	0.00379393	0.0139	NA	0.0058	NA	0.001	0.01	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.373604	NA	NA	NA	NA	NA	NA	NA	3.9861
1253	3	52842507	52842507	C	T	intronic	ITIH3	NA	NA	NA	intronic	ENSG00000162267	NA	NA	NA	NA	NA	3p21.1	NA	NA	NA	NA	rs138014257	0.01	0.01	0.008	0.00439297	0.0139	NA	0.0058	0.003	NA	0.02	NA	0.01	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.317255	NA	NA	NA	NA	ID=COSN229080;OCCURENCE=1(skin)	0.08	NA	3.9861
1253	4	48563715	48563715	A	G	intronic	FRYL	NA	NA	NA	intronic	ENSG00000075539	NA	NA	NA	NA	NA	4p11	NA	NA	NA	NA	rs75165298	0.01	0.01	0.01	0.00539137	0.0139	NA	0.0101	0.0038	0.001	0.02	NA	0.01	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.235117	NA	NA	NA	NA	NA	0.007	NA	3.9861
1253	5	52360658	52360658	A	T	intronic	ITGA2	NA	NA	NA	intronic	ENSG00000164171	NA	NA	NA	NA	NA	5q11.2	NA	NA	NA	NA	rs139704993	0.02	0.02	0.015	0.0105831	0.0139	0.0238	0.0029	NA	0.0133	0.01	0.04	0.0028	NA	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.753425	NA	NA	NA	NA	NA	NA	NA	3.9861
1253	6	168999384	168999384	G	A	intronic	SMOC2	NA	NA	NA	intronic	ENSG00000112562	NA	NA	NA	NA	NA	6q27	NA	NA	NA	NA	rs117915839	0.01	0.01	0.007	0.00399361	0.0139	NA	0.0086	NA	NA	0.02	NA	0.01	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.752343	NA	NA	NA	NA	NA	0.007	NA	3.9861
1253	9	72055804	72055804	G	A	intronic	APBA1	NA	NA	NA	intronic	ENSG00000107282	NA	NA	NA	NA	NA	9q21.11	NA	NA	NA	NA	rs141781087	0.01	0.01	0.006	0.00479233	0.0139	NA	0.0101	NA	0.0031	0.02	NA	0.01	0.002	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.766068	NA	NA	NA	NA	NA	0.007	NA	3.9861
1253	12	31256059	31256059	G	A	intronic	DDX11	NA	NA	NA	intronic	ENSG00000013573	NA	NA	NA	NA	NA	12p11.21	NA	NA	NA	NA	rs149612726	0.0041	0.0041	0.003	0.00439297	0.0139	NA	0.0072	0.0008	0.002	0.01	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.1311	NA	NA	NA	NA	NA	NA	NA	3.9861
1253	12	124911463	124911463	C	T	intronic	NCOR2	NA	NA	NA	intronic	ENSG00000196498	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs112284309	0.01	0.01	0.006	0.00359425	0.0139	NA	0.0014	NA	0.0031	0.01	NA	0.0028	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.056331	NA	NA	NA	NA	NA	NA	NA	3.9861
1253	16	23491345	23491345	C	A	intronic	GGA2	NA	NA	NA	intronic	ENSG00000103365	NA	NA	NA	NA	NA	16p12.2	NA	NA	NA	NA	rs112893762	0.01	0.01	0.007	0.014377	0.0139	0.001	0.013	0.0189	0.0235	0.01	NA	0.02	0.02	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.762568	NA	NA	NA	NA	NA	0.007	NA	3.9861
1253	16	23499858	23499858	C	T	intronic	GGA2	NA	NA	NA	intronic	ENSG00000103365	NA	NA	NA	NA	NA	16p12.2	NA	NA	NA	NA	rs113348656	0.01	0.01	0.009	0.014377	0.0139	0.001	0.013	0.0189	0.0235	0.01	NA	0.02	0.02	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.035609	NA	NA	NA	NA	NA	0.007	NA	3.9861
1253	17	72845848	72845848	C	T	intronic	GRIN2C	NA	NA	NA	intronic	ENSG00000161509	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs147942219	0.01	0.01	0.009	0.00778754	0.0139	NA	NA	NA	0.0256	0.02	NA	NA	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.014472	NA	NA	NA	NA	NA	0.007	NA	3.9861
1253	18	66564393	66564393	G	A	intronic	CCDC102B	NA	NA	NA	intronic	ENSG00000150636	NA	NA	NA	NA	NA	18q22.1	NA	NA	NA	NA	rs117509554	0.02	0.02	0.02	0.0191693	0.0139	0.0665	NA	0.0023	0.0123	0.02	0.07	NA	0.002	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.301743	NA	NA	NA	NA	NA	0.007	NA	3.9861
1253	18	66564751	66564751	C	A	intronic	CCDC102B	NA	NA	NA	intronic	ENSG00000150636	NA	NA	NA	NA	NA	18q22.1	NA	NA	NA	NA	rs116988359	0.02	0.02	0.018	0.01877	0.0139	0.0665	NA	0.0008	0.0123	0.02	0.07	NA	0.002	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.65078	NA	NA	NA	NA	NA	0.007	NA	3.9861
1253	19	40748648	40748648	C	T	intronic	AKT2	NA	NA	NA	intronic	ENSG00000105221	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs35948893	0.02	0.02	0.02	0.0197684	0.0139	NA	0.0288	0.0469	0.0031	0.01	NA	0.04	0.05	NA	0.065	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.078045	NA	NA	NA	NA	NA	0.072	NA	3.9861
1253	10	127540856	127540856	G	A	intronic	BCCIP,DHX32	NA	NA	NA	intronic	ENSG00000089876,ENSG00000107949	NA	NA	NA	NA	NA	10q26.2	NA	NA	NA	NA	rs182403412	0.0023	0.0023	NA	0.00159744	0.003	NA	0.0043	NA	0.002	0.004	NA	0.01	NA	0.0044	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.116577	NA	NA	0.006628	0.000908	NA	NA	NA	3.985972
1253	19	9641766	9641766	A	G	intronic	ZNF426	NA	NA	NA	intronic	ENSG00000130818	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs8100409	0.04	0.04	0.046	0.0503195	NA	NA	0.0115	0.1846	NA	NA	NA	0.01	0.18	0.0135	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.291173	NA	NA	0.000698	0.143668	NA	0.101	NA	3.985802
1253	11	4623319	4623319	C	T	intronic	TRIM68	NA	NA	NA	intronic	ENSG00000167333	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs2231968	0.01	0.01	0.012	0.0109824	0.008	0.001	0.0043	0.0325	NA	0.004	0.0017	NA	0.03	0.0062	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.089635	NA	NA	NA	NA	NA	0.007	NA	3.9858
1253	3	127965923	127965923	G	A	intronic	EEFSEC	NA	NA	NA	intronic	ENSG00000132394	NA	NA	NA	NA	NA	3q21.3	NA	NA	NA	NA	rs149992198	0.0023	0.0023	0.002	0.00239617	0.005	NA	0.0029	0.0008	0.0041	0.01	NA	NA	NA	0.0047	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.502945	2.502945	NA	0.004652	0.001362	NA	NA	NA	3.985648
1253	1	40432897	40432897	G	T	intronic	MFSD2A	NA	NA	NA	intronic	ENSG00000168389	NA	NA	NA	NA	NA	1p34.2	NA	NA	NA	NA	rs116255627	NA	NA	NA	0.00379393	0.004	NA	0.0058	0.0008	0.0102	NA	NA	NA	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.448335	NA	NA	0.010371	0.001445	NA	NA	NA	3.985629
1253	12	50529971	50529971	A	G	intronic	CERS5	NA	NA	NA	ncRNA_intronic	ENSG00000272368	NA	NA	NA	NA	NA	12q13.12	NA	NA	NA	NA	rs11169282	0.29	0.29	0.274	0.315495	0.3479	0.1825	0.304	0.3162	0.4264	0.34	0.19	0.3	0.31	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.203124	NA	NA	NA	NA	NA	0.355	NA	3.9854333
1253	13	46942081	46942081	A	G	intronic	KIAA0226L	NA	NA	NA	ncRNA_intronic	ENSG00000241353	NA	NA	NA	NA	NA	13q14.13	NA	NA	NA	NA	rs2476664	0.47	0.47	0.446	0.451677	0.3479	0.5933	0.4121	0.5287	0.3364	0.34	0.6	0.42	0.57	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.815757	NA	NA	NA	NA	NA	0.435	NA	3.9854333
1253	2	130930961	130930961	G	A	intronic	SMPD4	NA	NA	NA	intronic	ENSG00000136699	NA	NA	NA	NA	NA	2q21.1	NA	NA	NA	NA	rs114037844	0.02	0.02	0.017	0.0239617	0.004	NA	0.0159	0.0794	NA	0.004	NA	0.02	0.06	0.0085	0.076	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.148065	NA	NA	0.002093	0.075806	NA	0.022	NA	3.985407
1253	19	55693081	55693081	G	C	UTR3	PTPRH	NM_002842:c.*41C>G,NM_001161440:c.*41C>G	NA	NA	UTR3	ENSG00000080031	ENST00000263434:c.*41C>G,ENST00000376350:c.*41C>G	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs8112238	0.11	0.11	0.118	0.14397	0.1143	0.1726	0.0634	0.1233	0.2301	0.11	0.15	0.06	0.11	0.1267	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.945496	NA	NA	0.106977	0.122333	NA	0.167	NA	3.9853564
1253	18	47506778	47506778	T	C	intronic	MYO5B	NA	NA	NA	intronic	ENSG00000167306	NA	NA	NA	NA	NA	18q21.1	NA	NA	NA	NA	rs61177844	0.03	0.03	0.028	0.0321486	0.002	NA	0.0144	0.1074	0.0072	0.0013	NA	0.01	0.11	0.0112	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.631387	NA	NA	0.001449	0.103769	NA	0.058	NA	3.985351
1253	3	146239871	146239871	C	T	intronic	PLSCR1	NA	NA	NA	intronic	ENSG00000188313	NA	NA	NA	NA	NA	3q24	NA	NA	NA	NA	rs148327407	0.01	0.01	0.003	0.00399361	0.0089	NA	0.0159	NA	NA	0.01	NA	0.03	NA	0.0032	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.843717	NA	NA	0.002792	0.001362	NA	0.007	NA	3.985108
1253	1	17939405	17939405	C	A	intronic	ARHGEF10L	NA	NA	NA	intronic	ENSG00000074964	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs181145678	0.01	0.01	NA	0.0125799	0.0149	NA	0.0216	0.003	0.0297	0.01	NA	0.02	0.0041	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.975992	NA	NA	NA	NA	NA	NA	NA	3.9851
1253	12	48360895	48360895	G	C	intronic	TMEM106C	NA	NA	NA	intronic	ENSG00000134291	NA	NA	NA	NA	NA	12q13.11	NA	NA	NA	NA	rs117699587	0.01	0.01	0.01	0.00399361	0.0149	NA	0.0072	NA	NA	0.01	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.143718	NA	NA	NA	NA	NA	0.007	NA	3.9851
1253	12	102813632	102813632	C	T	intronic	IGF1	NA	NA	NA	intronic	ENSG00000017427	NA	NA	NA	NA	NA	12q23.2	NA	NA	NA	NA	rs2072592	0.09	0.09	0.061	0.0874601	0.0149	0.2669	0.1037	NA	0.0838	0.02	0.25	0.09	NA	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.035238	NA	NA	NA	NA	NA	0.029	NA	3.9851
1253	13	29252060	29252060	T	C	intronic	POMP	NA	NA	NA	intronic	ENSG00000132963	NA	NA	NA	NA	NA	13q12.3	NA	NA	NA	NA	rs137858324	0.01	0.01	0.003	0.00958466	0.0149	NA	0.0115	0.0008	0.0245	0.02	NA	0.01	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.577149	NA	NA	NA	NA	NA	NA	NA	3.9851
1253	14	24587504	24587504	A	G	intronic	DCAF11	NA	NA	NA	intronic	ENSG00000100897	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs2277479	0.08	0.08	0.074	0.0828674	0.0149	0.2034	0.072	0.0893	0.0276	0.01	0.21	0.06	0.07	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.361567	NA	NA	NA	NA	NA	0.029	NA	3.9851
1253	16	81295637	81295637	A	G	intronic	BCMO1	NA	NA	NA	intronic	ENSG00000135697	NA	NA	NA	NA	NA	16q23.2	NA	NA	NA	NA	rs148977820	0.01	0.01	0.002	0.00998403	0.0149	0.0089	0.0058	NA	0.0225	0.01	0.01	0.01	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.698532	NA	NA	NA	NA	NA	0.007	NA	3.9851
1253	19	12830222	12830222	A	G	intronic	TNPO2	NA	NA	NA	intronic	ENSG00000105576	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs80264991	0.01	0.01	0.005	0.0081869	0.0149	NA	0.0086	0.0023	0.0174	0.01	NA	0.01	0.0041	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.16615	NA	NA	NA	NA	NA	0.014	NA	3.9851
1254	12	132632723	132632723	T	C	intronic	NOC4L	NA	NA	NA	intronic	ENSG00000184967	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs112889701	0.0032	0.0032	NA	0.00199681	0.005	NA	0.0072	NA	NA	0.004	NA	0.01	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.23095	NA	NA	0.010057	0.002168	NA	0.007	NA	3.984943
1254	7	73118196	73118196	T	C	intronic	STX1A	NA	NA	NA	UTR3	ENSG00000071462	ENST00000423166:c.*782T>C,ENST00000436944:c.*1092T>C	NA	NA	NA	NA	7q11.23	NA	Name=TAF1	NA	NA	rs4363087	0.39	0.39	0.325	0.403355	0.3817	0.627	0.5144	0.0643	0.5746	0.38	0.61	0.49	0.07	0.4154	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.230358	NA	NA	0.384884	0.113028	NA	0.283	NA	3.9846827
1254	16	28607070	28607070	A	G	intronic	SULT1A2	NA	NA	NA	intronic	ENSG00000197165	NA	NA	NA	NA	NA	16p11.2	NA	Name=ERalpha_a	NA	NA	rs4149406	0.25	0.25	0.202	0.233227	0.326	0.0843	0.3991	0.2254	0.184	0.34	0.09	0.33	0.22	0.3232	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.448462	NA	NA	0.366279	0.251479	NA	0.174	NA	3.984521
1254	11	2423820	2423820	T	C	intronic	TSSC4	NA	NA	NA	intronic	ENSG00000184281	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs2234277	0.02	0.02	0.03	0.0297524	0.002	NA	0.0101	0.1059	NA	NA	NA	0.01	0.09	0.0129	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.615518	NA	NA	0.000583	0.086239	NA	0.029	NA	3.984517
1254	12	50513687	50513687	C	T	intronic	COX14	NA	NA	NA	ncRNA_intronic	ENSG00000272368	NA	NA	NA	NA	NA	12q13.12	NA	NA	NA	NA	rs7961065	0.32	0.32	0.314	0.364018	0.3489	0.1806	0.3055	0.4947	0.4335	0.34	0.19	0.3	0.45	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.061668	NA	NA	NA	NA	NA	0.399	NA	3.9844333
1254	19	41356123	41356123	G	A	intronic	CYP2A6	NA	NA	NA	intronic	ENSG00000255974,ENSG00000268797	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs8192722	0.03	0.03	0.035	0.0457268	NA	NA	0.013	0.1664	NA	0.0013	NA	0.02	0.13	0.0149	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.671226	NA	NA	0.000698	0.143895	NA	0.043	NA	3.984402
1254	14	90442197	90442197	A	G	intronic	TDP1	NA	NA	NA	intronic	ENSG00000042088	NA	NA	NA	NA	NA	14q32.11	NA	NA	NA	NA	rs35017384	0.03	0.03	0.029	0.0399361	0.002	NA	0.0159	0.1415	NA	NA	NA	0.02	0.11	0.0128	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.55054	NA	NA	0.000814	0.129823	NA	0.014	NA	3.984386
1254	3	136677098	136677098	A	G	intronic	IL20RB	NA	NA	NA	intronic	ENSG00000174564	NA	NA	NA	NA	NA	3q22.3	NA	NA	NA	NA	rs187532597	0.0037	0.0037	NA	0.00239617	0.0099	NA	0.0029	NA	NA	0.01	NA	0.0028	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.805817	NA	NA	0.005971	0.001445	NA	NA	NA	3.984129
1254	1	54483636	54483636	C	T	intronic	LDLRAD1	NA	NA	NA	intronic	ENSG00000203985	NA	NA	NA	NA	NA	1p32.3	NA	NA	NA	NA	rs74085128	0.09	0.09	0.097	0.0976438	0.0159	0.0427	0.0187	0.2973	0.0245	0.02	0.05	0.02	0.28	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.739133	NA	NA	NA	NA	NA	0.123	NA	3.9841
1254	7	87133863	87133863	G	A	intronic	ABCB1	NA	NA	NA	intronic	ENSG00000085563	NA	NA	NA	NA	NA	7q21.12	NA	NA	NA	NA	rs28364273	0.01	0.01	0.005	0.00499201	0.0159	0.001	0.0072	NA	0.0031	0.02	0.0017	0.01	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.246366	NA	NA	NA	NA	NA	NA	NA	3.9841
1254	9	101814590	101814590	C	T	intronic	COL15A1	NA	NA	NA	intronic	ENSG00000204291	NA	NA	NA	NA	NA	9q22.33	NA	NA	NA	NA	rs117494490	0.01	0.01	0.005	0.00399361	0.0159	NA	0.0058	NA	NA	0.02	NA	0.01	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.444848	NA	NA	NA	NA	NA	0.007	NA	3.9841
1254	11	6459797	6459797	T	C	intronic	HPX	NA	NA	NA	intronic	ENSG00000110169	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs17242778	0.01	0.01	0.004	0.00519169	0.0159	0.001	0.0115	0.0008	NA	0.01	NA	0.01	NA	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.195628	NA	NA	NA	NA	NA	NA	NA	3.9841
1254	16	88061386	88061386	G	A	intronic	BANP	NA	NA	NA	intronic	ENSG00000172530	NA	NA	NA	NA	NA	16q24.2	NA	NA	NA	NA	rs145769078	0.01	0.01	0.009	0.00758786	0.0159	NA	0.0029	NA	0.0204	0.02	NA	0.01	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.552724	NA	NA	NA	NA	NA	NA	NA	3.9841
1254	5	224684	224684	G	A	intronic	SDHA	NA	NA	NA	intronic	ENSG00000073578	NA	NA	NA	NA	NA	5p15.33	NA	NA	NA	NA	rs201953257	0.0032	0.0032	NA	0.00439297	0.006	NA	0.0014	0.0098	0.002	0.01	NA	NA	0.01	0.0043	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.910841	NA	NA	0.005702	0.01045	NA	0.007	NA	3.983998
1254	19	51470618	51470618	G	A	intronic	KLK6	NA	NA	NA	intronic	ENSG00000167755	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs140254627	0.0046	0.0046	0.003	0.00179712	0.0089	NA	NA	NA	NA	0.01	NA	0.0028	NA	0.0028	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.302793	NA	NA	0.004419	0.001135	NA	NA	NA	3.983881
1254	19	41355919	41355919	A	C	intronic	CYP2A6	NA	NA	NA	intronic	ENSG00000255974,ENSG00000268797	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs28399438	0.04	0.04	0.029	0.0465256	0.001	0.002	0.013	0.1664	0.001	0.0026	NA	0.02	0.13	0.0146	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.613842	NA	NA	0.000698	0.14276	NA	0.043	NA	3.983702
1254	5	35857177	35857177	G	C	intronic	IL7R	NA	NA	NA	intronic	ENSG00000168685	NA	NA	NA	NA	NA	5p13.2	NA	Name=BATF,EBF,JunD	Name=92	NA	rs1353252	0.65	0.65	0.655	0.647364	0.7018	0.4236	0.5562	0.9319	0.502	0.71	0.4	0.59	0.9	0.6395	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.087432	NA	NA	0.675116	0.874943	ID=COSN167434;OCCURENCE=1(large_intestine)	0.696	NA	3.983584
1254	13	70281749	70281749	A	C	intronic	KLHL1	NA	NA	NA	intronic	ENSG00000150361	NA	NA	NA	NA	NA	13q21.33	NA	NA	NA	NA	rs118148908	0.0037	0.0037	0.001	0.00199681	0.005	NA	0.0058	NA	0.001	0.01	NA	0.01	NA	0.0048	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.516449	1.516449	NA	0.006628	0.001589	NA	0.007	NA	3.983572
1254	14	90456031	90456031	C	T	intronic	TDP1	NA	NA	NA	intronic	ENSG00000042088	NA	NA	NA	NA	NA	14q32.11	NA	NA	NA	NA	rs35218343	0.03	0.03	0.035	0.0411342	0.002	0.0099	0.0159	0.1384	NA	NA	0.01	0.02	0.11	0.0142	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.074962	NA	NA	0.000465	0.127553	NA	0.014	NA	3.983335
1254	18	29038577	29038577	C	A	intronic	DSG3	NA	NA	NA	intronic	ENSG00000134757	NA	NA	NA	NA	NA	18q12.1	NA	NA	NA	NA	rs144604026	0.0041	0.0041	0.002	0.00319489	0.006	NA	0.0115	0.0008	0.001	0.0026	NA	0.02	0.002	0.0039	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.183881	NA	NA	0.00686	0.001135	NA	NA	NA	3.98324
1254	1	77672452	77672452	T	C	intronic	PIGK	NA	NA	NA	intronic	ENSG00000142892	NA	NA	NA	NA	NA	1p31.1	NA	NA	NA	NA	rs201620183	0.0018	0.0018	NA	0.000998403	0.005	NA	NA	NA	NA	0.01	NA	NA	NA	0.0042	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.699819	NA	NA	0.007676	0.001362	NA	NA	NA	3.983124
1254	20	31762003	31762003	A	G	intronic	BPIFA2	NA	NA	NA	intronic	ENSG00000131050	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs79337613	0.03	0.03	0.034	0.0279553	0.005	NA	0.0058	0.0991	NA	0.01	NA	0.01	0.11	0.0099	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.836231	NA	NA	0.001977	0.090785	NA	0.029	NA	3.983123
1254	3	58063123	58063123	G	A	intronic	FLNB	NA	NA	NA	intronic	ENSG00000136068	NA	NA	NA	NA	NA	3p14.3	NA	NA	NA	NA	rs115199080	0.01	0.01	0.009	0.00539137	0.0169	NA	0.0086	NA	0.0041	0.02	0.0017	0.02	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.446772	NA	NA	NA	NA	NA	NA	NA	3.9831
1254	5	56170758	56170758	G	A	intronic	MAP3K1	NA	NA	NA	intronic	ENSG00000095015	NA	NA	NA	NA	NA	5q11.2	NA	NA	NA	NA	rs149459371	0.01	0.01	0.004	0.00738818	0.0169	NA	0.0216	0.003	0.001	0.02	NA	0.02	0.01	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.496452	NA	NA	NA	NA	NA	0.007	NA	3.9831
1254	9	33926767	33926767	G	A	intronic	UBAP2	NA	NA	NA	intronic	ENSG00000137073	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs12551409	0.01	0.01	0.003	0.013778	0.0169	0.001	0.0058	0.0015	0.046	0.01	NA	0.01	0.002	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.621109	NA	NA	NA	NA	NA	NA	NA	3.9831
1254	10	52445346	52445346	G	A	intergenic	SGMS1,ASAH2B	dist=61609;dist=54342	NA	NA	ncRNA_intronic	ENSG00000232706	NA	NA	NA	NA	NA	10q11.23	NA	NA	NA	NA	rs71508052	0.01	0.01	NA	0.00559105	0.0169	NA	0.0072	0.0008	0.0051	0.01	NA	0.01	0.002	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.822423	NA	NA	NA	NA	NA	NA	NA	3.9831
1254	16	75665838	75665838	T	C	intronic	KARS	NA	NA	NA	intronic	ENSG00000065427	NA	NA	NA	NA	NA	16q23.1	NA	NA	NA	NA	rs148298278	0.01	0.01	0.01	0.0103834	0.0169	NA	0.0187	0.0015	0.0204	0.02	NA	0.02	0.002	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.557047	NA	NA	NA	NA	NA	0.014	NA	3.9831
1254	16	89651817	89651817	C	G	intronic	CPNE7	NA	NA	NA	intronic	ENSG00000178773	NA	NA	NA	NA	NA	16q24.3	NA	NA	NA	NA	rs137959554	0.01	0.01	NA	0.0195687	0.0169	0.001	0.0173	0.0015	0.0675	0.01	NA	0.02	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.178124	NA	NA	NA	NA	NA	NA	NA	3.9831
1254	18	8413099	8413099	C	T	intergenic	PTPRM,RAB12	dist=6240;dist=196344	NA	NA	ncRNA_exonic	ENSG00000266613	NA	NA	NA	NA	NA	18p11.23	NA	NA	NA	NA	rs144586887	0.01	0.01	0.007	0.00838658	0.0169	NA	0.0202	NA	0.0112	0.02	NA	0.02	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.632091	NA	NA	NA	NA	NA	0.036	NA	3.9831
1254	19	18709519	18709519	C	T	intronic	CRLF1	NA	NA	NA	intronic	ENSG00000006016	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs142312755	0.01	0.01	0.002	0.00419329	0.0169	NA	0.0043	0.0008	NA	0.02	NA	NA	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.640266	NA	NA	NA	NA	NA	NA	NA	3.9831
1254	20	31762043	31762043	G	A	intronic	BPIFA2	NA	NA	NA	intronic	ENSG00000131050	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs79185071	0.03	0.03	0.034	0.0279553	0.005	NA	0.0058	0.0991	NA	0.01	NA	0.01	0.11	0.0099	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.706436	NA	NA	0.002093	0.090785	NA	0.029	NA	3.983007
1254	8	125334267	125334267	T	C	intronic	TMEM65	NA	NA	NA	intronic	ENSG00000164983	NA	NA	NA	NA	NA	8q24.13	NA	NA	NA	NA	rs185398992	0.0046	0.0046	NA	0.00359425	0.0089	NA	0.0014	0.0008	0.0072	0.01	NA	0.0028	0.002	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.331935	NA	NA	0.008171	0	NA	0.007	NA	3.982929
1254	6	44329777	44329777	C	G	intronic	SPATS1	NA	NA	NA	intronic	ENSG00000249481,ENSG00000272442	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs114150800	0.01	0.01	0.007	0.0107827	0.007	0.002	0.0115	0.0083	0.0266	0.01	0.0017	0.01	0.01	0.0067	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.248828	NA	NA	0.003488	0.007036	NA	0.014	NA	3.982812
1254	19	47883264	47883264	G	A	intronic	DHX34	NA	NA	NA	intronic	ENSG00000134815	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs73065330	0.0032	0.0032	0.003	0.00179712	0.006	NA	0.0029	NA	0.001	0.01	NA	0.01	NA	0.0048	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.555273	NA	NA	0.006395	0.001816	NA	0.058	NA	3.982805
1254	5	108713982	108713982	T	C	exonic	PJA2	NA	synonymous SNV	PJA2:NM_014819:exon4:c.A1206G:p.A402A	exonic	ENSG00000198961	NA	synonymous SNV	ENSG00000198961:ENST00000361557:exon3:c.A1206G:p.A402A,ENSG00000198961:ENST00000361189:exon4:c.A1206G:p.A402A	NA	NA	5q21.3	NA	NA	NA	NA	rs12523186	0.32	0.32	0.289	0.32508	0.5915	0.0565	0.4726	0.0643	0.5757	0.6	0.04	0.47	0.08	0.4998	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.523634	NA	NA	0.592674	0.156676	NA	0.377	NA	3.9826926
1254	16	30347731	30347731	A	G	intergenic	LOC595101,CD2BP2	dist=1036;dist=14356	NA	NA	intergenic	ENSG00000183604,ENSG00000169217	dist=1036;dist=14356	NA	NA	NA	NA	16p11.2	NA	Name=TCF4,HEY1	NA	NA	rs8051096	0.33	0.33	0.34	0.352037	0.3509	0.0823	0.2738	0.6362	0.3027	0.33	0.08	0.29	0.66	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.493451	NA	NA	NA	NA	NA	0.435	NA	3.9824334
1254	19	39688815	39688815	C	T	intronic	NCCRP1	NA	NA	NA	intronic	ENSG00000188505	NA	NA	NA	NA	NA	19q13.2	NA	Name=CTCF,Rad21,AP-2gamma,CTCF_(SC-5916),AP-2alpha	NA	NA	rs12610064	0.38	0.38	0.374	0.369209	0.326	0.4206	0.3444	0.3896	0.3507	0.31	0.48	0.41	0.36	0.3581	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.361748	NA	NA	0.333488	0.400363	NA	0.384	NA	3.982412
1254	19	55014088	55014088	C	T	UTR5	LAIR2	NM_002288:c.-47C>T,NM_021270:c.-47C>T	NA	NA	UTR5	ENSG00000167618	ENST00000301202:c.-47C>T	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs2042287	0.14	0.14	0.113	0.152756	0.1044	0.12	0.1974	0.1392	0.2229	0.11	0.13	0.2	0.16	0.1376	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.249715	NA	NA	0.10907	0.143441	NA	0.065	NA	3.9822634
1254	1	13881514	13881514	G	A	intergenic	LRRC38,PDPN	dist=41272;dist=28738	NA	NA	ncRNA_exonic	ENSG00000215909	NA	NA	NA	NA	NA	1p36.21	NA	NA	NA	NA	rs600760	0.07	0.07	0.067	0.0752796	0.0179	0.1052	0.0303	0.1142	0.0828	0.01	0.12	0.02	0.11	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.194625	NA	NA	NA	NA	NA	0.058	NA	3.9821
1254	1	76397517	76397517	C	T	intronic	ASB17	NA	NA	NA	intronic	ENSG00000154007	NA	NA	NA	NA	NA	1p31.1	NA	NA	NA	NA	rs17097710	0.05	0.05	0.041	0.0533147	0.0179	NA	0.0403	0.1634	0.0051	0.01	NA	0.04	0.16	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.491822	NA	NA	NA	NA	NA	0.029	NA	3.9821
1254	2	160076076	160076076	G	C	intronic	TANC1	NA	NA	NA	intronic	ENSG00000115183	NA	NA	NA	NA	NA	2q24.2	NA	NA	NA	NA	rs190857414	0.01	0.01	NA	0.00399361	0.0179	NA	0.0014	NA	0.001	0.02	NA	NA	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.401501	NA	NA	NA	NA	NA	NA	NA	3.9821
1254	4	7533191	7533191	C	T	intronic	SORCS2	NA	NA	NA	intronic	ENSG00000184985	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs73214626	0.02	0.02	0.022	0.0221645	0.0179	NA	0.0072	0.0635	0.0041	0.02	NA	0.01	0.06	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.324361	NA	NA	NA	NA	NA	0.014	NA	3.9821
1254	5	17275270	17275270	A	C	intronic	BASP1	NA	NA	NA	intronic	ENSG00000176788	NA	NA	NA	NA	NA	5p15.1	NA	NA	NA	NA	rs145961515	0.01	0.01	0.005	0.00459265	0.0179	NA	0.0043	NA	0.002	0.02	NA	0.01	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.288769	NA	NA	NA	NA	NA	NA	NA	3.9821
1254	5	178989472	178989472	G	A	intronic	RUFY1	NA	NA	NA	intronic	ENSG00000176783	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs192390258	0.01	0.01	NA	0.00798722	0.0179	NA	0.0144	NA	0.0123	0.01	NA	0.02	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.270766	NA	NA	NA	NA	NA	NA	NA	3.9821
1254	11	124955775	124955775	G	A	intronic	SLC37A2	NA	NA	NA	intronic	ENSG00000134955	NA	NA	NA	NA	NA	11q24.2	NA	NA	NA	NA	rs34947287	0.01	0.01	0.006	0.00579073	0.0179	NA	0.0101	NA	0.0041	0.02	NA	0.01	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.321259	NA	NA	NA	NA	NA	NA	NA	3.9821
1254	8	75926195	75926195	T	G	intronic	CRISPLD1	NA	NA	NA	intronic	ENSG00000121005	NA	NA	NA	NA	NA	8q21.11	NA	NA	NA	NA	rs77552013	0.04	0.04	0.05	0.0465256	0.001	NA	0.0159	0.1657	0.002	NA	NA	0.02	0.18	0.0147	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.323073	3.323073	NA	0.00221	0.14276	NA	0.058	NA	3.98209
1254	2	231106210	231106210	T	C	intronic	SP140	NA	NA	NA	intronic	ENSG00000079263	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs75177776	0.0027	0.0027	0.002	0.00259585	0.0099	NA	0.0029	0.0008	NA	0.01	NA	0.0028	NA	0.0036	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.032656	NA	NA	0.004723	0.0013	NA	0.051	NA	3.981777
1254	14	24776457	24776457	C	G	intronic	CIDEB	NA	NA	NA	UTR3	ENSG00000196943	ENST00000267425:c.*2156C>G	NA	NA	NA	NA	14q12	NA	NA	NA	NA	rs11158634	0.15	0.15	0.131	0.15016	0.1849	0.004	0.3473	0.1573	0.1155	0.2	0.01	0.3	0.14	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.475383	NA	NA	NA	NA	NA	0.13	NA	3.9817667
1254	10	105812932	105812932	G	A	intronic	COL17A1	NA	NA	NA	intronic	ENSG00000065618	NA	NA	NA	NA	NA	10q25.1	NA	NA	NA	NA	rs72821450	0.0027	0.0027	0.003	0.00199681	0.006	0.001	NA	NA	0.0031	0.01	0.0017	NA	NA	0.0054	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.006569	NA	NA	0.007093	0.001362	NA	0.043	NA	3.981507
1254	6	31083729	31083729	A	C	UTR3	CDSN	NM_001264:c.*73T>G	NA	NA	UTR3	ENSG00000204539	ENST00000376288:c.*73T>G	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs3095297	0.46	0.46	0.459	0.451078	0.3519	0.506	0.4035	0.6172	0.3057	0.35	0.52	0.4	0.59	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.754592	NA	NA	NA	NA	NA	0.391	NA	3.9814334
1254	8	6357307	6357307	T	C	UTR3	ANGPT2	NM_001147:c.*3315A>G,NM_001118887:c.*3315A>G,NM_001118888:c.*3315A>G	NA	NA	UTR3	ENSG00000091879	ENST00000325203:c.*3315A>G,ENST00000415216:c.*3315A>G	NA	NA	NA	NA	8p23.1	NA	NA	NA	NA	rs2916715	0.19	0.19	0.161	0.171925	0.3519	0.0754	0.2161	0.0151	0.2669	0.34	0.07	0.27	0.02	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.834715	1.834715	NA	NA	NA	NA	0.174	NA	3.9814334
1254	7	38356849	38356849	C	T	intergenic	TARP,LOC100506776	dist=43601;dist=24329	NA	NA	exonic	ENSG00000211695	NA	synonymous SNV	ENSG00000211695:ENST00000444775:exon2:c.G135A:p.V45V	NA	NA	7p14.1	NA	NA	NA	NA	rs56794613	0.19	0.19	0.188	0.186302	0.166	0.3333	0.1196	0.0877	0.2362	0.17	0.33	0.14	0.1	0.1816	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.442651	1.442651	NA	0.171191	0.084926	NA	0.217	NA	3.981209
1254	1	36029258	36029258	A	G	intronic	NCDN	NA	NA	NA	intronic	ENSG00000020129	NA	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	rs75396401	0.06	0.06	0.059	0.0852636	0.0189	0.0972	0.0159	0.1528	0.0992	0.02	0.08	0.02	0.15	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.26241	1.26241	NA	NA	NA	NA	0.072	NA	3.9811
1254	6	35211990	35211990	T	G	intronic	SCUBE3	NA	NA	NA	intronic	ENSG00000146197	NA	NA	NA	NA	NA	6p21.31	NA	NA	NA	NA	rs58925593	0.11	0.11	0.098	0.113419	0.0189	0.3274	0.0965	0.0416	0.0992	0.03	0.31	0.08	0.04	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.095898	NA	NA	NA	NA	NA	0.051	NA	3.9811
1254	17	36997696	36997696	T	G	upstream	C17orf98	NA	NA	NA	UTR5	ENSG00000214556	ENST00000398575:c.-54A>C	NA	NA	NA	NA	17q12	NA	NA	NA	NA	rs141665212	0.01	0.01	0.004	0.00678914	0.0189	NA	0.0101	0.0008	0.0072	0.01	NA	0.01	0.002	NA	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.671046	NA	NA	NA	NA	NA	NA	NA	3.9811
1254	18	5423324	5423324	C	T	intronic	EPB41L3	NA	NA	NA	intronic	ENSG00000082397	NA	NA	NA	NA	NA	18p11.31	NA	NA	NA	NA	rs59407154	0.05	0.05	NA	0.0591054	0.0189	NA	0.0274	0.1589	0.0491	0.02	NA	0.04	0.18	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.919706	NA	NA	NA	NA	NA	0.08	NA	3.9811
1254	18	47516936	47516936	C	G	intronic	MYO5B	NA	NA	NA	intronic	ENSG00000167306	NA	NA	NA	NA	NA	18q21.1	NA	NA	NA	NA	rs7234247	0.05	0.05	0.061	0.0613019	NA	NA	0.0187	0.2216	0.001	NA	NA	0.02	0.21	0.0181	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.894754	NA	NA	0.000962	0.187813	NA	0.094	NA	3.980938
1254	2	71801297	71801297	G	A	intronic	DYSF	NA	NA	NA	intronic	ENSG00000135636	NA	NA	NA	NA	NA	2p13.2	NA	NA	NA	NA	rs72902605	0.05	0.05	0.034	0.0539137	0.002	NA	0.0216	0.1914	NA	NA	NA	0.02	0.19	0.016	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.675582	NA	NA	0.001865	0.153636	NA	0.058	NA	3.980135
1254	2	49247151	49247151	C	T	intronic	FSHR	NA	NA	NA	intronic	ENSG00000170820	NA	NA	NA	NA	NA	2p16.3	NA	NA	NA	NA	rs78784563	0.01	0.01	0.009	0.00579073	0.0199	NA	0.013	NA	NA	0.02	NA	0.01	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.332396	NA	NA	NA	NA	NA	NA	NA	3.9801
1254	2	119726678	119726678	G	A	intronic	MARCO	NA	NA	NA	intronic	ENSG00000019169	NA	NA	NA	NA	NA	2q14.2	NA	NA	NA	NA	rs13004924	0.01	0.01	0.014	0.00559105	0.0199	NA	0.0072	0.0008	0.002	0.02	NA	0.01	0.0041	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.093895	NA	NA	NA	NA	NA	NA	NA	3.9801
1254	10	55913121	55913121	C	T	intronic	PCDH15	NA	NA	NA	intronic	ENSG00000150275	NA	NA	NA	NA	NA	10q21.1	NA	NA	NA	NA	rs41274632	0.07	0.07	0.067	0.101438	0.0199	0.0099	0.0389	0.2284	0.1524	0.02	0.01	0.03	0.25	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.676958	NA	NA	NA	NA	NA	0.065	NA	3.9801
1254	14	90437743	90437743	T	C	intronic	TDP1	NA	NA	NA	intronic	ENSG00000042088	NA	NA	NA	NA	NA	14q32.11	NA	NA	NA	NA	rs11848062	0.09	0.09	0.097	0.10024	0.0199	0.0079	0.0447	0.3132	0.0297	0.02	0.01	0.05	0.3	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.992493	NA	NA	NA	NA	NA	0.051	NA	3.9801
1254	20	61463501	61463501	T	C	intronic	COL9A3	NA	NA	NA	intronic	ENSG00000092758	NA	NA	NA	NA	NA	20q13.33	NA	Name=FOXA2_(SC-6554)	NA	NA	rs741758	0.31	0.31	0.299	0.310503	0.332	0.1161	0.281	0.4917	0.2648	0.34	0.14	0.31	0.46	0.3293	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.792942	NA	NA	0.358804	0.45438	NA	0.348	NA	3.979896
1254	2	114035923	114035923	A	G	intronic	PAX8	NA	NA	NA	intronic	ENSG00000125618	NA	NA	NA	NA	NA	2q13	NA	Name=SUZ12	NA	NA	rs1867763	0.32	0.32	0.338	0.345647	0.3549	0.129	0.3674	0.5136	0.317	0.35	0.13	0.38	0.47	0.3342	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.981313	NA	NA	0.331144	0.478022	NA	0.355	NA	3.979756
1254	1	159803002	159803002	G	A	intronic	SLAMF8	NA	NA	NA	intronic	ENSG00000158714	NA	NA	NA	NA	NA	1q23.2	NA	NA	NA	NA	rs10157127	0.05	0.05	0.049	0.0603035	0.001	NA	0.0159	0.2186	0.001	NA	NA	0.01	0.2	0.018	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.553733	NA	NA	0.001395	0.178847	NA	0.029	NA	3.979605
1254	19	7809116	7809116	C	G	intronic	CD209	NA	NA	NA	intronic	ENSG00000090659	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs57668221	0.03	0.03	0.026	0.0359425	0.003	NA	0.0101	0.1286	NA	NA	NA	0.01	0.1	0.0138	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.597027	NA	NA	0.003721	0.110758	NA	0.058	NA	3.979479
1254	19	22379587	22379587	G	T	UTR5	ZNF676	NM_001001411:c.-152C>A	NA	NA	UTR5	ENSG00000196109	ENST00000397121:c.-152C>A	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs2360001	0.44	0.44	0.416	0.466254	0.3539	0.3393	0.3847	0.7126	0.4376	0.36	0.32	0.37	0.77	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.554205	NA	NA	NA	NA	NA	0.442	NA	3.9794334
1254	1	36096869	36096869	A	C	intronic	PSMB2	NA	NA	NA	intronic	ENSG00000126067	NA	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	rs59405996	0.0041	0.0041	0.002	0.00239617	0.0099	NA	0.0029	NA	NA	0.01	NA	0.0028	NA	0.0037	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.630147	NA	NA	0.006977	0.001362	NA	NA	NA	3.979423
1254	1	12342681	12342681	G	A	intronic	VPS13D	NA	NA	NA	intronic	ENSG00000048707	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs12565969	0.06	0.06	0.043	0.0786741	0.0209	0.0198	0.1282	0.1452	0.0736	0.03	0.01	0.11	0.13	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.177356	NA	NA	NA	NA	NA	0.065	NA	3.9791
1254	3	132207368	132207368	T	C	intronic	DNAJC13	NA	NA	NA	intronic	ENSG00000138246	NA	NA	NA	NA	NA	3q22.1	NA	NA	NA	NA	rs10512859	0.04	0.04	0.047	0.0541134	0.0209	NA	0.0216	0.1747	0.0041	0.02	NA	0.03	0.14	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.320821	NA	NA	NA	NA	NA	0.058	NA	3.9791
1254	4	9706455	9706455	G	A	intergenic	MIR548I2,DRD5	dist=148518;dist=76803	NA	NA	ncRNA_intronic	ENSG00000251087	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs12507065	0.02	0.02	0.017	0.0221645	0.0209	NA	0.0231	0.0477	0.0112	0.02	NA	0.04	0.05	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.221043	NA	NA	NA	NA	NA	0.022	NA	3.9791
1254	5	64913841	64913841	T	C	intronic	TRIM23	NA	NA	NA	intronic	ENSG00000113595	NA	NA	NA	NA	NA	5q12.3	NA	NA	NA	NA	rs11952500	0.06	0.06	0.053	0.0788738	0.0209	0.0893	0.0418	0.1104	0.1115	0.02	0.07	0.04	0.11	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.94494	NA	NA	NA	NA	NA	0.043	NA	3.9791
1254	11	45924852	45924852	C	G	intronic	MAPK8IP1	NA	NA	NA	intronic	ENSG00000121653	NA	NA	NA	NA	NA	11p11.2	NA	NA	NA	NA	rs61882478	0.01	0.01	0.004	0.00579073	0.0209	NA	0.0043	0.0023	0.002	0.03	NA	0.0028	0.0041	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.54373	NA	NA	NA	NA	NA	NA	NA	3.9791
1254	11	116744447	116744447	T	C	intronic	SIK3	NA	NA	NA	intronic	ENSG00000160584	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs1263160	0.07	0.07	0.064	0.0772764	0.0209	0.0813	0.0548	0.1581	0.0378	0.02	0.08	0.05	0.17	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.342074	NA	NA	NA	NA	NA	0.08	NA	3.9791
1254	17	40140693	40140693	C	A	intronic	DNAJC7	NA	NA	NA	intronic	ENSG00000168259	NA	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs117138610	0.01	0.01	0.009	0.0109824	0.0209	NA	0.013	0.003	0.0215	0.02	NA	0.01	0.01	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.224065	3.224065	NA	NA	NA	NA	0.007	NA	3.9791
1254	15	78789676	78789676	T	C	intronic	IREB2	NA	NA	NA	exonic	ENSG00000136381	NA	unknown	UNKNOWN	NA	NA	15q25.1	NA	NA	NA	NA	rs2292116	0.16	0.16	0.165	0.148962	0.1819	0.1667	0.1052	0.1256	0.1595	0.18	0.15	0.12	0.16	0.1716	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.952582	1.952582	NA	0.167445	0.146358	NA	0.123	NA	3.979055
1254	1	110168888	110168888	C	G	intronic	AMPD2	NA	NA	NA	intronic	ENSG00000116337	NA	NA	NA	NA	NA	1p13.3	NA	Name=CTCFL_(SC-98982),CTCF	Name=7	NA	rs493972	0.78	0.78	0.765	0.804513	0.662	0.9802	0.7695	0.733	0.8916	0.65	0.99	0.75	0.76	0.7248	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.315273	NA	NA	0.634186	0.751248	NA	0.768	NA	3.979014
1254	7	141952023	141952023	G	A	UTR3	PRSS58	NM_001001317:c.*18C>T	NA	NA	UTR3	ENSG00000258223	ENST00000547058:c.*18C>T,ENST00000552471:c.*18C>T	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs1052408	0.18	0.18	0.174	0.20008	0.1034	0.1419	0.2565	0.3374	0.1339	0.09	0.14	0.26	0.31	0.1505	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.128313	NA	NA	0.100698	0.330685	NA	0.254	NA	3.9787354
1254	12	101684060	101684060	A	C	intronic	UTP20	NA	NA	NA	intronic	ENSG00000120800	NA	NA	NA	NA	NA	12q23.2	NA	NA	NA	NA	rs111551110	0.0023	0.0023	0.003	0.00479233	0.007	NA	0.0014	NA	0.0164	0.004	NA	0.0028	0.002	0.0071	0.0072	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.16069	NA	NA	0.007209	0.001362	NA	NA	NA	3.978691
1254	6	166889281	166889281	T	A	intronic	RPS6KA2	NA	NA	NA	exonic	ENSG00000071242	NA	synonymous SNV	ENSG00000071242:ENST00000366863:exon11:c.A492T:p.L164L	NA	NA	6q27	NA	NA	NA	NA	rs4373344	0.42	0.42	0.445	0.451278	0.2614	0.5278	0.2968	0.6498	0.409	0.25	0.52	0.31	0.66	0.3315	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.520035	NA	NA	0.26218	0.548516	NA	0.493	NA	3.9782533
1254	19	7122799	7122799	C	T	intronic	INSR	NA	NA	NA	intronic	ENSG00000171105	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs41300628	0.0027	0.0027	NA	0.00219649	0.006	0.002	0.0014	0.0008	0.001	0.01	NA	NA	NA	0.0067	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.179947	NA	NA	0.00907	0.001816	NA	0.007	NA	3.97823
1254	9	140508258	140508258	A	G	intronic	ARRDC1	NA	NA	NA	intronic	ENSG00000197070	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs11137151	0.04	0.04	0.049	0.0467252	0.005	NA	0.013	0.1664	NA	0.0013	NA	0.01	0.15	0.0145	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.423583	NA	NA	0.002326	0.135497	NA	0.072	NA	3.978174
1254	19	3653525	3653525	C	T	exonic	PIP5K1C	NA	synonymous SNV	PIP5K1C:NM_001195733:exon7:c.G684A:p.S228S,PIP5K1C:NM_012398:exon7:c.G684A:p.S228S	exonic	ENSG00000186111	NA	synonymous SNV	ENSG00000186111:ENST00000335312:exon7:c.G684A:p.S228S,ENSG00000186111:ENST00000537021:exon7:c.G684A:p.S228S,ENSG00000186111:ENST00000539785:exon7:c.G684A:p.S228S,ENSG00000186111:ENST00000589578:exon7:c.G684A:p.S228S	NA	NA	19p13.3	NA	NA	NA	NA	rs2074957	0.58	0.58	0.553	0.542931	0.5636	0.6865	0.6513	0.4463	0.4274	0.55	0.7	0.64	0.45	0.5603	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.60525	NA	NA	0.564651	0.460735	NA	0.514	NA	3.9781156
1254	1	183675576	183675576	C	T	intronic	RGL1	NA	NA	NA	intronic	ENSG00000143344	NA	NA	NA	NA	NA	1q25.3	NA	NA	NA	NA	rs34232349	0.01	0.01	0.008	0.00978435	0.0219	NA	0.013	0.0008	0.0174	0.02	NA	0.02	0.002	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.957454	NA	NA	NA	NA	NA	0.007	NA	3.9781
1254	3	13543529	13543529	C	T	intronic	HDAC11	NA	NA	NA	intronic	ENSG00000163517	NA	NA	NA	NA	NA	3p25.1	NA	NA	NA	NA	rs73815731	0.03	0.03	0.018	0.019369	0.0219	0.001	0.0101	0.0484	0.0031	0.02	NA	0.02	0.07	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.333285	NA	NA	NA	NA	NA	0.029	NA	3.9781
1254	7	32511199	32511199	G	A	intergenic	LOC100130673,LSM5	dist=13093;dist=13746	NA	NA	ncRNA_exonic	ENSG00000226421	NA	NA	NA	NA	NA	7p14.3	NA	NA	NA	NA	rs139336771	0.01	0.01	0.009	0.00658946	0.0219	NA	0.0101	NA	0.0041	0.02	NA	0.01	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.386754	NA	NA	NA	NA	NA	NA	NA	3.9781
1254	11	24750572	24750572	T	A	intronic	LUZP2	NA	NA	NA	intronic	ENSG00000187398	NA	NA	NA	NA	NA	11p14.3	NA	NA	NA	NA	rs72884424	0.01	0.01	0.012	0.0091853	0.0219	NA	0.0187	0.0038	0.0061	0.02	NA	0.02	0.01	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.372515	NA	NA	NA	NA	NA	0.051	NA	3.9781
1254	16	7726988	7726988	C	G	intronic	RBFOX1	NA	NA	NA	intronic	ENSG00000078328	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs190838972	0.01	0.01	NA	0.00559105	0.0219	NA	0.0029	0.0023	0.001	0.02	NA	NA	0.0041	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.389671	NA	NA	NA	NA	NA	NA	NA	3.9781
1254	16	58756265	58756265	A	C	intronic	GOT2	NA	NA	NA	intronic	ENSG00000125166	NA	NA	NA	NA	NA	16q21	NA	NA	NA	NA	rs35298154	0.01	0.01	0.008	0.00499201	0.0219	NA	0.0014	0.0008	0.001	0.02	NA	0.0028	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.226919	3.226919	NA	NA	NA	NA	0.007	NA	3.9781
1254	18	44593607	44593607	C	T	intronic	KATNAL2	NA	NA	NA	intronic	ENSG00000167216	NA	NA	NA	NA	NA	18q21.1	NA	NA	NA	NA	rs56272937	0.01	0.01	0.007	0.00858626	0.0219	0.006	0.0115	0.0008	0.0061	0.02	0.01	0.01	0.002	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.372909	1.372909	NA	NA	NA	NA	0.029	NA	3.9781
1254	19	8530073	8530073	T	C	intronic	HNRNPM	NA	NA	NA	intronic	ENSG00000099783	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs76325274	0.05	0.05	0.058	0.0519169	0.0219	NA	0.0346	0.1604	0.002	0.02	NA	0.02	0.18	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.759689	NA	NA	NA	NA	NA	0.087	NA	3.9781
1254	19	10112432	10112432	T	G	intronic	COL5A3	NA	NA	NA	intronic	ENSG00000080573	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs8100235	0.05	0.05	0.054	0.0746805	NA	NA	0.0231	0.2708	NA	NA	NA	0.01	0.23	0.0211	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.665033	NA	NA	0.00093	0.231956	NA	0.072	NA	3.97797
1254	2	207172627	207172627	A	G	exonic	ZDBF2	NA	synonymous SNV	ZDBF2:NM_020923:exon5:c.A3375G:p.Q1125Q	exonic	ENSG00000204186	NA	synonymous SNV	ENSG00000204186:ENST00000374423:exon5:c.A3375G:p.Q1125Q	NA	NA	2q33.3	NA	NA	NA	NA	rs7582864	0.47	0.47	0.465	0.457867	0.5636	0.3571	0.6066	0.326	0.5256	0.57	0.36	0.58	0.37	0.5294	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.603802	NA	NA	0.595838	0.39545	ID=COSM442176,COSM442177;OCCURENCE=1(breast)	0.435	NA	3.9778286
1254	2	133636367	133636367	A	G	intronic	NCKAP5	NA	NA	NA	intronic	ENSG00000176771	NA	NA	NA	NA	NA	2q21.2	NA	NA	NA	NA	rs74378836	0.01	0.01	0.01	0.00998403	0.0129	NA	0.0101	0.0227	NA	0.01	NA	0.01	0.02	NA	0.026	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.772081	NA	NA	0.009428	0.026012	NA	0.007	NA	3.977672
1254	19	8045944	8045944	C	T	intronic	ELAVL1	NA	NA	NA	intronic	ENSG00000066044	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs74333296	0.01	0.01	0.01	0.00579073	0.005	0.0218	NA	0.0008	0.001	0.01	0.03	NA	0.002	0.0068	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.339533	NA	NA	0.010581	0.003631	NA	NA	NA	3.977619
1254	2	113090047	113090047	T	C	exonic	ZC3H6	NA	synonymous SNV	ZC3H6:NM_198581:exon12:c.T3552C:p.T1184T	exonic	ENSG00000188177	NA	synonymous SNV	ENSG00000188177:ENST00000343936:exon12:c.T3552C:p.T1184T,ENSG00000188177:ENST00000409871:exon12:c.T3552C:p.T1184T	NA	NA	2q13	NA	NA	NA	NA	rs4578863	0.71	0.71	0.709	0.724042	0.5477	0.7421	0.6455	0.966	0.6155	0.55	0.78	0.59	0.97	0.598	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.254336	NA	NA	0.543774	0.895111	NA	0.703	NA	3.9771926
1254	10	124340557	124340557	T	C	intronic	DMBT1	NA	NA	NA	intronic	ENSG00000187908	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs12764545	NA	NA	0.037	0.190096	0.0229	0.2113	0.1167	0.3298	0.2035	NA	NA	NA	NA	NA	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.585002	NA	NA	NA	NA	NA	0.022	NA	3.9771
1254	11	292805	292805	G	A	intronic	ATHL1	NA	NA	NA	intronic	ENSG00000142102	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs11246056	0.14	0.14	0.111	0.138179	0.0229	0.2808	0.1873	0.1309	0.0849	0.02	0.31	0.14	0.1	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.474877	NA	NA	NA	NA	NA	0.043	NA	3.9771
1254	16	69942527	69942527	G	A	intronic	WWP2	NA	NA	NA	intronic	ENSG00000198373	NA	NA	NA	NA	NA	16q22.1	NA	NA	NA	NA	rs118165329	0.01	0.01	0.007	0.0131789	0.0229	NA	0.0115	0.0023	0.0327	0.02	NA	0.01	0.0041	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.243707	NA	NA	NA	NA	NA	0.014	NA	3.9771
1254	16	70818557	70818557	A	G	intronic	VAC14	NA	NA	NA	intronic	ENSG00000103043	NA	NA	NA	NA	NA	16q22.2	NA	NA	NA	NA	rs72792880	0.01	0.01	0.008	0.00698882	0.0229	NA	0.0101	0.0015	0.0031	0.02	NA	0.02	0.002	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.204461	NA	NA	NA	NA	NA	0.051	NA	3.9771
1254	17	55190092	55190092	C	T	intronic	AKAP1	NA	NA	NA	intronic	ENSG00000121057	NA	NA	NA	NA	NA	17q22	NA	NA	NA	NA	rs9890757	0.08	0.08	0.09	0.0872604	0.0229	0.006	0.0303	0.2738	0.0256	0.02	0.01	0.02	0.27	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.697613	NA	NA	NA	NA	NA	0.072	NA	3.9771
1254	22	46746447	46746447	C	T	intronic	TRMU	NA	NA	NA	intronic	ENSG00000100416	NA	NA	NA	NA	NA	22q13.31	NA	NA	NA	NA	rs114042113	0.01	0.01	0.012	0.0135783	0.0229	NA	0.0202	0.0136	0.0133	0.01	NA	0.03	0.02	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.271101	NA	NA	NA	NA	NA	0.014	NA	3.9771
1254	22	46747802	46747802	C	T	intronic	TRMU	NA	NA	NA	intronic	ENSG00000100416	NA	NA	NA	NA	NA	22q13.31	NA	NA	NA	NA	rs142795512	0.01	0.01	0.005	0.0139776	0.0229	NA	0.0202	0.0136	0.0153	0.01	NA	0.03	0.02	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.515419	NA	NA	NA	NA	NA	0.014	NA	3.9771
1254	16	66646591	66646591	C	T	UTR3	CMTM3	NM_144601:c.*51C>T,NM_181553:c.*51C>T	NA	NA	UTR3	ENSG00000140931	ENST00000424011:c.*51C>T,ENST00000562707:c.*51C>T,ENST00000361909:c.*51C>T,ENST00000460097:c.*51C>T,ENST00000567572:c.*51C>T,ENST00000564060:c.*51C>T,ENST00000566756:c.*226C>T,ENST00000568477:c.*51C>T,ENST00000566121:c.*51C>T	NA	NA	NA	NA	16q21	NA	NA	Name=8	NA	rs3743719	0.39	0.39	0.345	0.364417	0.4672	0.4196	0.3718	0.2088	0.407	0.46	0.44	0.41	0.22	0.4282	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.286837	NA	NA	0.461028	0.231591	NA	0.275	NA	3.9769054
1254	22	42908897	42908897	T	C	UTR3	RRP7A	NM_015703:c.*19A>G	NA	NA	UTR3	ENSG00000189306	ENST00000323013:c.*19A>G	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs13504	0.13	0.13	0.076	0.120407	0.162	0.0516	0.1974	0.1498	0.0542	0.16	0.02	0.2	0.16	0.1947	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.17885	NA	NA	NA	NA	NA	0.101	NA	3.9766334
1254	6	31106268	31106268	A	G	intronic	PSORS1C1,PSORS1C2	NA	NA	NA	intronic	ENSG00000204538,ENSG00000204540	NA	NA	NA	NA	Name=Systemic sclerosis	6p21.33	NA	NA	NA	NA	rs3130573	0.34	0.34	0.348	0.342652	0.3469	0.1835	0.317	0.4879	0.3241	0.37	0.19	0.29	0.51	0.3306	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.113475	NA	NA	0.345884	0.448709	NA	0.355	NA	3.976616
1254	7	150738180	150738180	C	T	intronic	ABCB8	NA	NA	NA	intronic	ENSG00000197150	NA	NA	NA	NA	NA	7q36.1	NA	NA	NA	NA	rs56221441	0.01	0.01	NA	0.00419329	0.0149	NA	0.0086	NA	NA	0.01	NA	0.01	NA	0.0032	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.791301	NA	NA	0.005349	0.000908	NA	NA	NA	3.976551
1254	10	97983762	97983762	A	G	intronic	BLNK	NA	NA	NA	intronic	ENSG00000095585	NA	NA	NA	NA	NA	10q24.1	NA	NA	NA	NA	rs118063042	0.01	0.01	0.006	0.00898562	0.0099	NA	0.0101	0.0166	0.0061	0.01	NA	0.01	0.02	0.0065	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.674211	NA	NA	0.007326	0.012029	NA	0.007	NA	3.976274
1254	8	30416484	30416484	G	A	intronic	RBPMS	NA	NA	NA	intronic	ENSG00000157110	NA	NA	NA	NA	NA	8p12	NA	NA	NA	NA	rs138861966	0.0041	0.0041	0.002	0.00299521	0.0089	NA	0.0058	0.0008	0.001	0.01	NA	0.01	0.002	0.0059	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.024573	NA	NA	0.008953	0.002724	NA	NA	NA	3.976247
1254	2	54856951	54856951	C	T	intronic	SPTBN1	NA	NA	NA	intronic	ENSG00000115306	NA	NA	NA	NA	NA	2p16.2	NA	NA	NA	NA	rs10195423	0.04	0.04	0.03	0.0465256	0.007	0.001	0.0303	0.1536	0.001	0.004	0.0017	0.03	0.14	0.0148	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.503483	NA	NA	0.001977	0.136178	NA	0.029	NA	3.976223
1254	19	30102967	30102967	G	A	intronic	POP4	NA	NA	NA	intronic	ENSG00000105171	NA	NA	NA	NA	NA	19q12	NA	NA	NA	NA	rs76658284	0.03	0.03	0.035	0.0471246	0.0109	0.0069	0.0274	0.0666	0.1135	0.01	NA	0.04	0.1	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.80252	NA	NA	0.012885	0.078035	NA	0.036	NA	3.976215
1254	17	29206549	29206549	A	C	intronic	ATAD5	NA	NA	NA	intronic	ENSG00000176208	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs191477958	0.01	0.01	NA	0.00439297	0.0119	NA	0.013	0.0008	NA	0.01	NA	0.01	0.002	0.0046	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.057827	NA	NA	0.007326	0.002272	NA	NA	NA	3.976174
1254	5	171766963	171766963	G	A	intronic	SH3PXD2B	NA	NA	NA	intronic	ENSG00000174705	NA	NA	NA	NA	NA	5q35.1	NA	NA	NA	NA	rs79042273	0.0041	0.0041	0.006	0.00239617	0.0089	NA	0.0014	NA	0.002	0.01	NA	0.0028	NA	0.0058	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.27202	NA	NA	0.009188	0.001362	NA	0.043	NA	3.976112
1254	12	7757467	7757467	T	C	intergenic	CD163,APOBEC1	dist=101053;dist=44529	NA	NA	ncRNA_exonic	ENSG00000256331	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs118007663	0.02	0.02	0.016	0.0135783	0.0239	NA	0.0303	0.0144	0.0041	0.02	NA	0.03	0.02	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.237529	NA	NA	NA	NA	NA	0.007	NA	3.9761
1254	21	44742350	44742350	C	T	intergenic	CRYAA,SIK1	dist=149437;dist=92048	NA	NA	ncRNA_exonic	ENSG00000237864	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs55956145	0.01	0.01	0.008	0.00599042	0.0239	NA	0.0058	NA	0.002	0.02	NA	0.0028	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.534508	NA	NA	NA	NA	NA	NA	NA	3.9761
1254	1	54476147	54476147	G	A	intronic	LDLRAD1	NA	NA	NA	intronic	ENSG00000203985	NA	NA	NA	NA	NA	1p32.3	NA	NA	NA	NA	rs17109656	0.14	0.14	0.156	0.159944	0.0239	0.0565	0.0418	0.5008	0.0297	0.03	0.06	0.05	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.504245	NA	NA	NA	NA	NA	0.174	NA	3.9761
1254	2	231222447	231222447	A	G	intronic	SP140L	NA	NA	NA	intronic	ENSG00000079263,ENSG00000185404	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs76627271	0.01	0.01	0.005	0.00858626	0.0239	NA	0.0231	0.0008	0.002	0.03	NA	0.02	NA	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.972727	NA	NA	NA	NA	NA	0.051	NA	3.9761
1254	6	147599434	147599434	A	G	intronic	STXBP5	NA	NA	NA	intronic	ENSG00000164506	NA	NA	NA	NA	NA	6q24.3	NA	NA	NA	NA	rs80087606	0.01	0.01	0.006	0.00778754	0.0239	0.001	0.0043	0.0068	0.002	0.02	NA	0.01	0.002	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.825941	1.825941	NA	NA	NA	NA	NA	NA	3.9761
1254	14	70171604	70171604	A	G	intronic	KIAA0247	NA	NA	NA	intronic	ENSG00000100647	NA	NA	NA	NA	NA	14q24.1	NA	NA	NA	NA	rs79592875	0.03	0.03	0.027	0.0201677	0.0239	0.0069	0.0115	0.0461	0.001	0.03	0.01	0.02	0.05	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.929368	1.929368	NA	NA	NA	NA	0.065	NA	3.9761
1254	17	64876953	64876953	G	T	intronic	CACNG5	NA	NA	NA	intronic	ENSG00000075429	NA	NA	NA	NA	NA	17q24.2	NA	NA	NA	NA	rs141748550	0.01	0.01	0.006	0.0121805	0.0239	NA	0.0101	0.0015	0.0286	0.02	NA	0.02	0.002	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.918131	NA	NA	NA	NA	NA	0.007	NA	3.9761
1254	6	158504981	158504981	C	T	intronic	SYNJ2	NA	NA	NA	intronic	ENSG00000078269	NA	NA	NA	NA	NA	6q25.3	NA	NA	Name=5	NA	rs2236401	0.54	0.54	0.556	0.533746	0.5089	0.5774	0.3516	0.612	0.5378	0.53	0.55	0.39	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.272381	NA	NA	0.515068	0.583333	NA	0.551	NA	3.976032
1254	8	135622940	135622940	T	G	intronic	ZFAT	NA	NA	NA	intronic	ENSG00000066827	NA	NA	NA	NA	NA	8q24.22	NA	NA	NA	NA	rs118085744	0.0046	0.0046	0.008	0.00319489	0.0109	NA	0.0014	0.0015	0.002	0.01	NA	0.0028	0.0041	0.0049	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.740613	NA	NA	0.008205	0.001526	NA	0.014	NA	3.975995
1254	1	201330366	201330366	G	C	intronic	TNNT2	NA	NA	NA	intronic	ENSG00000118194	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs2275862	0.06	0.06	0.048	0.0579073	0.001	0.2183	0.013	0.0318	0.0184	0.0013	0.19	0.01	0.02	0.0223	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.28131	NA	NA	0.000814	0.030867	NA	0.051	NA	3.975886
1254	2	89084327	89084327	G	C	ncRNA_exonic	ANKRD36BP2	NA	NA	NA	ncRNA_exonic	ENSG00000230006	NA	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs335121	0.71	0.71	0.759	0.709665	0.6909	0.4772	0.67	0.9841	0.6258	0.7	0.5	0.67	0.98	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.311776	NA	NA	NA	NA	NA	0.783	NA	3.9757666
1254	11	70007478	70007478	C	T	intronic	ANO1	NA	NA	NA	intronic	ENSG00000131620	NA	NA	NA	NA	NA	11q13.3	NA	NA	NA	NA	rs112891405	0.0027	0.0027	NA	0.00838658	0.006	NA	0.0043	NA	0.0337	0.004	NA	0.01	NA	0.011	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.268783	NA	NA	0.007387	0.000692	NA	NA	NA	3.975613
1254	19	580793	580793	A	C	intronic	BSG	NA	NA	NA	intronic	ENSG00000172270	NA	NA	NA	NA	NA	19p13.3	NA	NA	Name=2	NA	rs10416339	0.48	0.48	0.411	0.519369	0.3062	0.5188	0.5432	0.6914	0.4898	0.28	0.53	0.51	0.68	0.3979	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.685895	NA	NA	0.320307	0.636529	NA	0.471	NA	3.975593
1254	6	150023348	150023348	C	G	UTR5	LATS1	NM_004690:c.-86G>C,NM_001270519:c.-86G>C	NA	NA	UTR5	ENSG00000131023	ENST00000543571:c.-86G>C,ENST00000253339:c.-86G>C,ENST00000441107:c.-86G>C,ENST00000392273:c.-86G>C,ENST00000542720:c.-86G>C	NA	NA	NA	NA	6q25.1	NA	NA	NA	NA	rs4870509	0.47	0.47	0.418	0.433307	0.3579	0.8244	0.6023	0.1452	0.3773	0.35	0.8	0.57	0.18	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.527421	1.527421	NA	NA	NA	NA	0.478	NA	3.9754334
1254	11	46742047	46742047	C	G	intronic	F2	NA	NA	NA	intronic	ENSG00000180210	NA	NA	NA	NA	NA	11p11.2	NA	NA	NA	NA	rs147062971	0.01	0.01	0.003	0.00359425	0.0129	NA	0.0072	NA	NA	0.01	NA	0.01	NA	0.0058	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.004692	NA	NA	0.006164	0.001363	NA	NA	NA	3.975136
1254	2	71762092	71762092	G	A	intronic	DYSF	NA	NA	NA	intronic	ENSG00000135636	NA	NA	NA	NA	NA	2p13.2	NA	NA	NA	NA	rs184773309	0.01	0.01	NA	0.00778754	0.0139	0.001	0.0043	NA	0.0215	0.01	NA	0.0028	NA	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.280577	NA	NA	0.010999	0.002168	NA	0.014	NA	3.975101
1254	1	179347679	179347679	A	G	intronic	AXDND1	NA	NA	NA	intronic	ENSG00000162779	NA	NA	NA	NA	NA	1q25.2	NA	NA	NA	NA	rs144872008	0.01	0.01	0.003	0.00678914	0.0249	NA	0.0058	0.0015	0.0031	0.02	NA	0.01	0.002	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.317847	NA	NA	NA	NA	NA	NA	NA	3.9751
1254	2	170029849	170029849	C	T	intronic	LRP2	NA	NA	NA	intronic	ENSG00000081479	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	rs62172587	0.01	0.01	NA	0.0081869	0.0249	0.004	0.0014	NA	0.0112	0.02	0.01	0.0028	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.783438	NA	NA	NA	NA	NA	NA	NA	3.9751
1254	4	175181085	175181085	T	C	intronic	FBXO8	NA	NA	NA	intronic	ENSG00000164117	NA	NA	NA	NA	NA	4q34.1	NA	NA	NA	NA	rs79814512	0.01	0.01	0.01	0.00698882	0.0249	NA	0.0115	0.0008	0.001	0.03	NA	0.01	0.002	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.873315	NA	NA	NA	NA	NA	0.007	NA	3.9751
1254	7	86542136	86542136	A	C	intronic	KIAA1324L	NA	NA	NA	intronic	ENSG00000164659	NA	NA	NA	NA	NA	7q21.12	NA	NA	NA	NA	rs13231385	0.01	0.01	0.008	0.00738818	0.0249	NA	0.0058	0.0038	0.0031	0.03	NA	0.01	0.0041	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.213305	NA	NA	NA	NA	NA	0.007	NA	3.9751
1254	11	134217147	134217147	G	A	intronic	GLB1L2	NA	NA	NA	intronic	ENSG00000149328	NA	NA	NA	NA	NA	11q25	NA	NA	NA	NA	rs117883178	0.01	0.01	0.009	0.00698882	0.0249	NA	0.0043	NA	0.0072	0.02	NA	0.0028	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.066766	NA	NA	NA	NA	NA	0.007	NA	3.9751
1254	17	26081122	26081122	A	T	intergenic	LGALS9,NOS2	dist=104536;dist=2670	NA	NA	ncRNA_exonic	ENSG00000266786	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs192646452	0.01	0.01	NA	0.0105831	0.0249	NA	0.0115	0.0023	0.0174	0.02	NA	0.01	0.0041	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.697593	NA	NA	NA	NA	NA	0.014	NA	3.9751
1254	18	5395478	5395478	C	T	intronic	EPB41L3	NA	NA	NA	intronic	ENSG00000082397	NA	NA	NA	NA	NA	18p11.31	NA	NA	NA	NA	rs73375704	0.03	0.03	0.033	0.0245607	0.0249	NA	0.0144	0.0567	0.0133	0.03	NA	0.02	0.06	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.432029	NA	NA	NA	NA	NA	0.036	NA	3.9751
1254	18	5396045	5396045	A	G	intronic	EPB41L3	NA	NA	NA	intronic	ENSG00000082397	NA	NA	NA	NA	NA	18p11.31	NA	NA	NA	NA	rs375999728	NA	NA	NA	0.0465256	0.0249	NA	0.0187	0.1354	0.0164	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.709024	NA	NA	NA	NA	NA	NA	NA	3.9751
1254	22	46742157	46742157	G	C	intronic	TRMU	NA	NA	NA	intronic	ENSG00000100416	NA	NA	NA	NA	NA	22q13.31	NA	NA	NA	NA	rs6008768	0.16	0.16	0.177	0.196885	0.0249	NA	0.0663	0.6694	0.0307	0.02	NA	0.07	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.27783	NA	NA	NA	NA	NA	0.196	NA	3.9751
1255	19	39693670	39693670	C	G	intronic	SYCN	NA	NA	NA	intronic	ENSG00000179751	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs73553708	0.04	0.04	0.045	0.0467252	0.002	NA	0.013	0.1687	NA	0.0013	NA	0.02	0.17	0.0218	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.228418	NA	NA	0.00122	0.170777	NA	0.087	NA	3.97498
1255	8	142161064	142161064	C	T	intronic	DENND3	NA	NA	NA	intronic	ENSG00000105339	NA	NA	NA	NA	Name=Obesity-related traits	8q24.3	NA	NA	NA	NA	rs3816063	0.29	0.29	0.294	0.267372	0.3767	0.1994	0.2378	0.2504	0.2689	0.39	0.21	0.26	0.25	0.3067	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.900686	NA	NA	0.341628	0.264639	NA	0.203	NA	3.974972
1255	12	120574976	120574976	C	T	intronic	GCN1L1	NA	NA	NA	intronic	ENSG00000089154	NA	NA	NA	NA	NA	12q24.23	NA	NA	NA	NA	rs56130412	0.05	0.05	0.059	0.0636981	NA	0.1081	0.0245	0.1014	0.0603	NA	0.11	0.02	0.1	0.0235	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.602271	NA	NA	0.00154	0.095825	NA	0.029	NA	3.97496
1255	10	97976495	97976495	C	G	intronic	BLNK	NA	NA	NA	intronic	ENSG00000095585	NA	NA	NA	NA	NA	10q24.1	NA	NA	NA	NA	rs17111459	0.01	0.01	0.013	0.014377	0.0099	NA	0.0086	0.0378	0.0061	0.01	NA	0.01	0.04	0.0077	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.561902	NA	NA	0.007791	0.023377	NA	0.007	NA	3.974609
1255	11	69486591	69486591	T	G	intronic	ORAOV1	NA	NA	NA	intronic	ENSG00000149716	NA	NA	NA	NA	NA	11q13.3	NA	NA	NA	NA	rs142367375	0.0041	0.0041	0	0.00439297	0.0089	NA	0.0029	NA	0.0112	0.01	NA	0.01	NA	0.0064	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.019224	NA	NA	0.01013	0.001818	NA	NA	NA	3.97457
1255	1	224585958	224585958	A	C	ncRNA_exonic	MIR4742	NA	NA	NA	ncRNA_exonic	ENSG00000266618	NA	NA	NA	NA	NA	1q42.11	NA	NA	NA	NA	rs7522956	0.23	0.23	0.234	0.231629	0.2485	0.0109	0.1686	0.5091	0.1115	0.24	0.01	0.2	0.5	0.2169	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.160832	NA	NA	0.226744	0.470481	NA	0.37	NA	3.9745226
1255	21	47737081	47737081	C	T	intronic	C21orf58	NA	NA	NA	intronic	ENSG00000160298	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs371184858	NA	NA	NA	0.00179712	0.008	NA	NA	NA	0.001	NA	NA	NA	NA	0.0076	0.0099	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.98345	NA	NA	0.009937	0.001372	NA	NA	NA	3.974463
1255	3	172321697	172321697	C	T	intergenic	TNFSF10,NCEH1	dist=80400;dist=26738	NA	NA	ncRNA_exonic	ENSG00000224426	NA	NA	NA	NA	NA	3q26.31	NA	NA	NA	NA	rs35974192	0.01	0.01	0.009	0.0127796	0.0258	NA	0.036	0.0015	0.0112	0.02	NA	0.04	NA	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.741378	NA	NA	NA	NA	NA	0.065	NA	3.9742
1255	1	182554330	182554330	G	A	intronic	RNASEL	NA	NA	NA	intronic	ENSG00000135828	NA	NA	NA	NA	NA	1q25.3	NA	NA	NA	NA	rs78685194	0.01	0.01	0.011	0.00738818	0.0258	NA	0.0043	0.0008	0.0072	0.03	NA	0.01	0.002	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.333426	NA	NA	NA	NA	NA	0.022	NA	3.9742
1255	2	73477257	73477257	C	A	intronic	CCT7	NA	NA	NA	intronic	ENSG00000135624	NA	NA	NA	NA	NA	2p13.2	NA	NA	NA	NA	rs2231435	0.07	0.07	0.069	0.0632987	0.0258	NA	0.0403	0.1989	NA	0.02	NA	0.06	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.155044	NA	NA	NA	NA	NA	0.094	NA	3.9742
1255	2	231077268	231077268	C	T	intronic	SP110	NA	NA	NA	intronic	ENSG00000079263,ENSG00000135899	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs41309094	0.01	0.01	0.013	0.0113818	0.0258	NA	0.0144	0.0015	0.0194	0.03	NA	0.02	0.002	NA	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.097348	NA	NA	NA	NA	NA	0.022	NA	3.9742
1255	4	123237811	123237811	G	A	intronic	KIAA1109	NA	NA	NA	intronic	ENSG00000138688	NA	NA	NA	NA	NA	4q27	NA	NA	NA	NA	rs75396983	0.01	0.01	0.012	0.00758786	0.0258	NA	0.0115	0.0015	0.002	0.03	NA	0.02	0.002	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.536791	2.536791	NA	NA	NA	NA	0.007	NA	3.9742
1255	9	139988754	139988754	A	C	intronic	MAN1B1	NA	NA	NA	intronic	ENSG00000177239	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs118009986	0.01	0.01	0.004	0.0123802	0.0258	0.001	0.0014	NA	0.0348	0.03	NA	NA	NA	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.26452	NA	NA	NA	NA	NA	0.007	NA	3.9742
1255	13	99043224	99043224	A	C	intronic	FARP1	NA	NA	NA	intronic	ENSG00000152767	NA	NA	NA	NA	NA	13q32.2	NA	NA	NA	NA	rs9584830	0.03	0.03	0.026	0.0295527	0.0258	NA	0.0274	0.0537	0.0327	0.02	NA	0.04	0.06	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.090805	NA	NA	NA	NA	NA	0.029	NA	3.9742
1255	19	33106721	33106721	C	T	intronic	ANKRD27	NA	NA	NA	intronic	ENSG00000105186	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs10409374	0.07	0.07	0.084	0.0800719	0.002	NA	0.0216	0.2905	NA	NA	NA	0.03	0.29	0.0232	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.181028	NA	NA	0.000698	0.233772	NA	0.08	NA	3.974102
1255	1	229675343	229675343	C	T	intronic	ABCB10	NA	NA	NA	intronic	ENSG00000135776	NA	NA	NA	NA	NA	1q42.13	NA	NA	NA	NA	rs35725309	0.03	0.03	0.043	0.0471246	0.004	0.002	0.013	0.1581	0.0123	0.0013	NA	0.01	0.14	0.0175	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.040922	NA	NA	0.004419	0.135951	NA	0.051	NA	3.974081
1255	3	386247	386247	C	T	intronic	CHL1	NA	NA	NA	intronic	ENSG00000134121	NA	NA	NA	NA	NA	3p26.3	NA	NA	Name=3	NA	rs3736632	0.28	0.28	0.254	0.284145	0.333	0.3621	0.268	0.0862	0.4325	0.34	0.39	0.26	0.08	0.3522	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.372869	1.372869	NA	0.340814	0.108715	NA	0.167	NA	3.973986
1255	8	124357352	124357352	G	A	intronic	ATAD2	NA	NA	NA	intronic	ENSG00000156802	NA	NA	NA	NA	NA	8q24.13	NA	NA	NA	NA	rs117906147	0.0037	0.0037	0.002	0.00539137	0.005	0.001	0.0058	NA	0.0174	0.01	0.0017	0.01	NA	0.0086	0.012	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.335513	NA	NA	0.012442	0.000454	NA	0.007	NA	3.973958
1255	1	27435976	27435976	C	G	intronic	SLC9A1	NA	NA	NA	intronic	ENSG00000090020	NA	NA	NA	NA	NA	1p36.11	NA	Name=CTCF	NA	NA	rs3738689	0.23	0.23	0.228	0.236621	0.3469	0.1141	0.1758	0.1974	0.3456	0.36	0.1	0.22	0.18	0.3087	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.012419	NA	NA	0.370465	0.23695	NA	0.239	NA	3.973935
1255	20	34319775	34319775	A	T	intronic	RBM39	NA	NA	NA	UTR3	ENSG00000131051	ENST00000426951:c.*87T>A	NA	NA	NA	NA	20q11.22	NA	NA	NA	NA	rs2425112	0.24	0.24	0.248	0.289936	0.1928	0.1835	0.1902	0.4486	0.3558	0.19	0.15	0.23	0.42	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.961778	NA	NA	NA	NA	NA	0.261	NA	3.9738667
1255	4	41983787	41983787	C	T	UTR5	DCAF4L1	NM_001029955:c.-23C>T	NA	NA	UTR5	ENSG00000182308	ENST00000333141:c.-23C>T	NA	NA	NA	NA	4p13	NA	NA	NA	NA	rs2174728	0.06	0.06	0.066	0.0433307	0.1352	0.001	0.0677	0.0068	0.0245	0.13	0.0017	0.08	0.01	0.0944	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.699492	NA	NA	0.13	0.023604	NA	0.058	NA	3.9737334
1255	8	141568725	141568725	G	A	intronic	AGO2	NA	NA	NA	intronic	ENSG00000123908	NA	NA	NA	NA	NA	8q24.3	NA	NA	Name=12	NA	rs2292776	0.62	0.62	0.617	0.655551	0.493	0.6022	0.6095	0.8691	0.6217	0.5	0.6	0.59	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.504147	NA	NA	0.533312	0.815751	NA	0.652	NA	3.973688
1255	7	156468656	156468656	G	A	intronic	RNF32	NA	NA	NA	ncRNA_intronic	ENSG00000225666	NA	NA	NA	NA	NA	7q36.3	NA	NA	NA	NA	rs2365513	0.43	0.43	0.427	0.420327	0.3598	0.4246	0.3501	0.5976	0.2883	0.38	0.42	0.34	0.59	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.55418	NA	NA	NA	NA	NA	0.312	NA	3.9735333
1255	16	53333569	53333569	G	T	intronic	CHD9	NA	NA	NA	ncRNA_exonic	ENSG00000261056	NA	NA	NA	NA	NA	16q12.2	NA	NA	NA	NA	rs2287079	0.32	0.32	0.273	0.294728	0.3598	0.2927	0.5418	0.2375	0.1319	0.35	0.25	0.49	0.21	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.792738	NA	NA	NA	NA	NA	0.355	NA	3.9735333
1255	2	174094500	174094500	G	A	ncRNA_intronic	MLK7-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000238133	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	rs16861404	0.24	0.24	0.243	0.240615	0.2406	0.0536	0.2795	0.3903	0.2035	0.22	0.06	0.3	0.43	0.2217	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.716814	1.716814	NA	0.230882	0.352002	NA	0.348	NA	3.9734846
1255	15	90617539	90617539	C	T	intronic	ZNF710	NA	NA	NA	exonic	ENSG00000140548	NA	synonymous SNV	ENSG00000140548:ENST00000558883:exon3:c.C966T:p.R322R	NA	NA	15q26.1	NA	NA	NA	NA	rs6496620	0.35	0.35	0.349	0.389976	0.2873	0.5367	0.3386	0.3238	0.4703	0.27	0.52	0.31	0.33	0.3161	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.159416	NA	NA	0.256515	0.323182	NA	0.268	NA	3.9734183
1255	8	110448720	110448720	C	T	intronic	PKHD1L1	NA	NA	NA	intronic	ENSG00000205038	NA	NA	NA	NA	NA	8q23.1	NA	NA	NA	NA	rs144465841	0.01	0.01	0.01	0.00958466	0.0089	NA	0.0159	0.0008	0.0276	0.01	NA	0.01	NA	0.0091	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.224335	2.224335	NA	0.008684	0.00274	NA	NA	NA	3.973316
1255	15	25444577	25444577	C	T	upstream	SNORD115-16	NA	NA	NA	ncRNA_intronic	ENSG00000224078	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs11630308	0.15	0.15	0.154	0.178115	0.0537	0.2827	0.0346	0.2852	0.1554	0.06	0.27	0.03	0.22	0.0892	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.979971	NA	NA	0.050477	0.233447	NA	0.138	NA	3.9732896
1255	1	10394764	10394764	C	T	intronic	KIF1B	NA	NA	NA	intronic	ENSG00000054523	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs115067562	0.01	0.01	0.011	0.013778	0.0268	NA	0.0187	0.0023	0.0266	0.03	NA	0.02	0.002	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.358445	NA	NA	NA	NA	NA	0.014	NA	3.9732
1255	3	51284317	51284317	G	A	intronic	DOCK3	NA	NA	NA	intronic	ENSG00000088538	NA	NA	NA	NA	NA	3p21.2	NA	NA	NA	NA	rs112799991	0.01	0.01	0.012	0.00798722	0.0268	NA	0.0043	0.0023	0.0072	0.02	NA	0.01	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.358328	NA	NA	NA	NA	NA	NA	NA	3.9732
1255	4	20482251	20482251	G	T	intronic	SLIT2	NA	NA	NA	intronic	ENSG00000145147	NA	NA	NA	NA	NA	4p15.31	NA	NA	NA	NA	rs2125207	0.05	0.05	0.05	0.0513179	0.0268	0.0595	0.049	0.0885	0.0194	0.02	0.06	0.04	0.1	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.769914	NA	NA	NA	NA	NA	0.051	NA	3.9732
1255	7	86804053	86804053	A	C	intronic	DMTF1	NA	NA	NA	intronic	ENSG00000135164	NA	NA	NA	NA	NA	7q21.12	NA	NA	NA	NA	rs11976564	0.04	0.04	0.039	0.034345	0.0268	0.0635	0.0115	0.0492	0.0082	0.03	0.06	0.01	0.05	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.078201	NA	NA	NA	NA	NA	0.116	NA	3.9732
1255	11	43911211	43911211	A	G	intronic	ALKBH3	NA	NA	NA	intronic	ENSG00000166199	NA	NA	NA	NA	NA	11p11.2	NA	NA	NA	NA	rs35076527	0.06	0.06	0.036	0.0605032	0.0268	0.0248	0.2046	0.0393	0.0583	0.02	0.03	0.19	0.04	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.057979	NA	NA	NA	NA	NA	0.065	NA	3.9732
1255	12	430075	430075	T	A	intronic	KDM5A	NA	NA	NA	intronic	ENSG00000073614	NA	NA	NA	NA	NA	12p13.33	NA	NA	NA	NA	rs79485732	0.02	0.02	0.026	0.024361	0.0268	NA	0.013	0.0371	0.0378	0.03	NA	0.01	0.05	NA	0.054	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.607313	NA	NA	NA	NA	NA	0.036	NA	3.9732
1255	12	114358278	114358278	G	C	intronic	RBM19	NA	NA	NA	intronic	ENSG00000122965	NA	NA	NA	NA	NA	12q24.21	NA	NA	NA	NA	rs77735222	0.09	0.09	0.066	0.0788738	0.0268	0.126	0.2421	0.0408	0.0194	0.03	0.15	0.19	0.02	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.171931	NA	NA	NA	NA	NA	0.029	NA	3.9732
1255	12	114384364	114384364	C	T	intronic	RBM19	NA	NA	NA	intronic	ENSG00000122965	NA	NA	NA	NA	NA	12q24.21	NA	NA	NA	NA	rs2290793	0.08	0.08	0.063	0.0760783	0.0268	0.1131	0.2406	0.0416	0.0184	0.03	0.13	0.19	0.02	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.274895	NA	NA	NA	NA	NA	0.029	NA	3.9732
1255	12	114398071	114398071	C	T	intronic	RBM19	NA	NA	NA	intronic	ENSG00000122965	NA	NA	NA	NA	NA	12q24.21	NA	NA	NA	NA	rs78337597	0.08	0.08	0.064	0.076278	0.0268	0.1131	0.2421	0.0416	0.0184	0.03	0.13	0.19	0.02	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.400386	NA	NA	NA	NA	NA	0.029	NA	3.9732
1255	14	64548419	64548419	C	G	intronic	SYNE2	NA	NA	NA	intronic	ENSG00000054654	NA	NA	NA	NA	NA	14q23.2	NA	NA	NA	NA	rs17101626	0.06	0.06	0.071	0.0662939	0.0268	NA	0.0303	0.1853	0.0399	0.03	NA	0.04	0.2	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.059132	NA	NA	NA	NA	NA	0.101	NA	3.9732
1255	22	18016709	18016709	T	A	intronic	CECR2	NA	NA	NA	intronic	ENSG00000099954	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs62241410	0.04	0.04	0.039	0.0473243	0.0268	0.0179	0.0331	0.1165	0.0153	0.03	0.02	0.03	0.1	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.109836	NA	NA	NA	NA	NA	0.036	NA	3.9732
1255	22	25153784	25153784	G	A	intronic	PIWIL3	NA	NA	NA	intronic	ENSG00000184571	NA	NA	NA	NA	NA	22q11.23	NA	NA	NA	NA	rs79223236	0.01	0.01	0.015	0.0091853	0.0268	0.001	0.0173	0.0008	0.0051	0.02	0.0017	0.02	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.683951	NA	NA	NA	NA	NA	NA	NA	3.9732
1255	1	168545864	168545864	A	G	UTR5	XCL1	NM_002995:c.-12A>G	NA	NA	UTR5	ENSG00000143184	ENST00000367818:c.-12A>G	NA	NA	NA	NA	1q24.2	NA	NA	NA	NA	rs116453184	0.08	0.08	0.076	0.129593	0.164	0.0079	0.1239	0.2216	0.0992	0.1	0.01	0.09	0.12	0.1095	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.620603	1.620603	NA	0.086744	0.087835	NA	0.029	NA	3.9730894
1255	16	88039895	88039895	G	A	intronic	BANP	NA	NA	NA	intronic	ENSG00000172530	NA	NA	NA	NA	NA	16q24.2	NA	NA	NA	NA	rs139770048	0.01	0.01	0.005	0.00359425	0.0099	NA	0.0043	NA	0.0051	0.01	NA	0.01	NA	0.0079	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.123046	NA	NA	0.009188	0.001592	NA	0.043	NA	3.973012
1255	9	90388270	90388270	A	T	ncRNA_intronic	CTSL3P	NA	NA	NA	ncRNA_intronic	ENSG00000188029	NA	NA	NA	NA	NA	9q21.33	NA	NA	NA	NA	rs7853247	0.85	0.85	0.862	0.864617	0.6938	0.9782	0.8127	0.9554	0.8374	0.71	0.97	0.79	0.95	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.417273	NA	NA	NA	NA	NA	0.87	NA	3.9728666
1255	11	114183309	114183309	A	G	downstream	NNMT	NA	NA	NA	ncRNA_UTR3	ENSG00000166741	NA	NA	NA	NA	NA	11q23.2	NA	NA	NA	NA	rs4646337	0.2	0.2	0.2	0.211462	0.1938	0.1468	0.2334	0.3185	0.136	0.2	0.14	0.22	0.28	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.337441	NA	NA	NA	NA	NA	0.217	NA	3.9728666
1255	16	87960333	87960333	C	T	intronic	CA5A	NA	NA	NA	intronic	ENSG00000174990	NA	NA	NA	NA	NA	16q24.2	NA	NA	NA	NA	rs138646822	0.01	0.01	0.003	0.00519169	0.0129	NA	0.0072	0.0008	0.0072	0.01	NA	0.02	0.002	0.007	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.418049	NA	NA	0.007326	0.001137	NA	0.051	NA	3.972774
1255	1	207235954	207235954	G	A	intronic	PFKFB2	NA	NA	NA	UTR5	ENSG00000123836	ENST00000411990:c.-94G>A	NA	NA	Score=504;Name=lod=149	NA	1q32.2	NA	NA	NA	NA	rs2075863	0.28	0.28	0.27	0.256989	0.4155	0.1657	0.2522	0.2027	0.2648	0.4	0.16	0.29	0.23	0.3513	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.612443	2.612443	NA	0.427209	0.238538	ID=COSN163412;OCCURENCE=1(breast)	0.326	NA	3.9726577
1255	6	30036333	30036333	G	C	intronic	PPP1R11	NA	NA	NA	UTR5	ENSG00000204619	ENST00000376758:c.-121G>C	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs17187693	0.07	0.07	0.042	0.0848642	0.0586	0.1925	0.0317	0.0008	0.1524	0.06	0.16	0.04	0.002	0.0737	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.682692	NA	NA	0.062016	0.016225	NA	0.087	NA	3.9723507
1255	11	123753803	123753803	T	C	UTR3	TMEM225	NM_001013743:c.*42A>G	NA	NA	UTR3	ENSG00000204300	ENST00000375026:c.*42A>G	NA	NA	NA	NA	11q24.1	NA	NA	NA	NA	rs1939928	0.14	0.14	0.143	0.139577	0.1392	0.0228	0.0937	0.2935	0.0849	0.14	0.02	0.09	0.32	0.1255	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.119083	NA	NA	0.096301	0.187784	NA	0.123	NA	3.9723324
1255	1	103385791	103385791	C	G	intronic	COL11A1	NA	NA	NA	intronic	ENSG00000060718	NA	NA	NA	NA	NA	1p21.1	NA	NA	NA	NA	rs142849188	0.01	0.01	0.011	0.0117812	0.0278	NA	0.0202	NA	0.0174	0.02	NA	0.02	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.569001	NA	NA	NA	NA	NA	0.051	NA	3.9722
1255	2	28626860	28626860	G	A	intronic	FOSL2	NA	NA	NA	intronic	ENSG00000075426	NA	NA	NA	NA	NA	2p23.2	NA	NA	NA	NA	rs11900743	0.09	0.09	0.1	0.108427	0.0278	0.002	0.0346	0.3169	0.0716	0.03	NA	0.03	0.31	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.0867	NA	NA	NA	NA	NA	0.072	NA	3.9722
1255	2	86734778	86734778	C	T	intronic	CHMP3,RNF103-CHMP3	NA	NA	NA	intronic	ENSG00000115561,ENSG00000249884	NA	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs3731811	0.02	0.02	0.019	0.0235623	0.0278	0.0526	0.0231	0.0008	0.0204	0.03	0.03	0.03	NA	NA	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.152873	NA	NA	NA	NA	NA	0.022	NA	3.9722
1255	2	170058449	170058449	C	T	intronic	LRP2	NA	NA	NA	intronic	ENSG00000081479	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	rs62172610	0.01	0.01	0.01	0.0113818	0.0278	NA	0.0101	0.0008	0.0215	0.03	NA	0.01	NA	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.88867	1.88867	NA	NA	NA	NA	NA	NA	3.9722
1255	5	53154963	53154963	C	T	intergenic	NDUFS4,ARL15	dist=175792;dist=25651	NA	NA	upstream	ENSG00000217791	NA	NA	NA	NA	NA	5q11.2	NA	Name=JunD	NA	NA	rs271251	0.45	0.45	0.414	0.435104	0.5278	0.2877	0.5677	0.382	0.4693	0.54	0.29	0.55	0.41	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.686755	NA	NA	NA	NA	NA	0.493	NA	3.9722
1255	6	31631531	31631531	G	A	intronic	GPANK1	NA	NA	NA	intronic	ENSG00000204438	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs114733011	0.01	0.01	0.005	0.0133786	0.0278	0.003	0.0259	0.0015	0.0164	0.02	0.01	0.02	0.002	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.997023	NA	NA	NA	NA	NA	0.007	NA	3.9722
1255	9	137659000	137659000	C	T	intronic	COL5A1	NA	NA	NA	intronic	ENSG00000130635	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs72774432	0.03	0.03	0.02	0.0259585	0.0278	0.0585	0.0173	0.003	0.0276	0.03	0.05	0.02	0.01	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.399495	NA	NA	NA	NA	NA	0.058	NA	3.9722
1255	11	116628396	116628396	C	T	intronic	BUD13	NA	NA	NA	intronic	ENSG00000137656	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs143811287	0.01	0.01	0.006	0.00658946	0.0278	NA	0.0058	NA	0.001	0.03	NA	0.01	NA	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.433424	NA	NA	NA	NA	NA	0.007	NA	3.9722
1255	16	89920603	89920603	C	T	intronic	SPIRE2	NA	NA	NA	intronic	ENSG00000204991	NA	NA	NA	NA	NA	16q24.3	NA	NA	NA	NA	rs147256394	0.01	0.01	0.01	0.00758786	0.0278	NA	0.0101	0.0023	NA	0.03	NA	0.02	0.0041	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.296722	NA	NA	NA	NA	NA	0.014	NA	3.9722
1255	17	29206365	29206365	A	C	intronic	ATAD5	NA	NA	NA	intronic	ENSG00000176208	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs117202596	0.01	0.01	0.008	0.00958466	0.0278	0.001	0.0187	0.0015	0.0041	0.03	0.0017	0.02	0.002	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.194405	NA	NA	NA	NA	NA	0.007	NA	3.9722
1255	18	72177989	72177989	G	T	intronic	CNDP2	NA	NA	NA	intronic	ENSG00000133313	NA	NA	NA	NA	NA	18q22.3	NA	NA	NA	NA	rs79359709	0.01	0.01	0.008	0.013778	0.0278	0.002	0.013	0.0015	0.0286	0.03	NA	0.01	0.0041	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.059038	NA	NA	NA	NA	NA	0.007	NA	3.9722
1255	15	52609241	52609241	C	T	intronic	MYO5A	NA	NA	NA	intronic	ENSG00000197535	NA	NA	NA	NA	NA	15q21.2	NA	NA	NA	NA	rs72734962	0.0041	0.0041	0.005	0.00259585	0.0089	NA	0.0014	NA	0.0031	0.01	NA	0.0028	NA	0.0072	0.012	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.067055	NA	NA	0.011704	0.001887	NA	0.007	NA	3.972196
1255	13	73350257	73350257	C	T	intronic	DIS3	NA	NA	NA	intronic	ENSG00000083520	NA	NA	NA	NA	NA	13q22.1	NA	NA	NA	NA	rs142135553	0.01	0.01	0.006	0.00319489	0.0139	NA	0.0029	NA	NA	0.01	NA	0.0028	NA	0.006	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.256277	NA	NA	0.007912	0.002955	NA	0.007	NA	3.972188
1255	14	33292743	33292743	A	C	exonic	AKAP6	NA	synonymous SNV	AKAP6:NM_004274:exon13:c.A5724C:p.G1908G	exonic	ENSG00000151320	NA	synonymous SNV	ENSG00000151320:ENST00000280979:exon13:c.A5724C:p.G1908G	NA	NA	14q12	NA	NA	NA	NA	rs2239647	0.7	0.7	0.723	0.711262	0.5427	0.6696	0.683	0.9092	0.68	0.55	0.73	0.68	0.9	0.6078	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.538101	NA	NA	0.54407	0.858602	NA	0.63	NA	3.9720966
1255	18	10472074	10472074	G	A	intronic	APCDD1	NA	NA	NA	intronic	ENSG00000154856	NA	NA	NA	NA	NA	18p11.22	NA	NA	NA	NA	rs117942846	0.0027	0.0027	0	0.00359425	0.0089	NA	0.0043	0.0008	0.0051	0.01	NA	NA	0.002	0.0074	0.012	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.70675	NA	NA	0.011639	0.002271	NA	NA	NA	3.972061
1255	22	50277883	50277883	A	G	exonic	ZBED4	NA	synonymous SNV	ZBED4:NM_014838:exon2:c.A573G:p.P191P	exonic	ENSG00000100426	NA	synonymous SNV	ENSG00000100426:ENST00000216268:exon2:c.A573G:p.P191P	NA	NA	22q13.33	Score=1000;Name=V$AML1_01	NA	NA	NA	rs910797	0.93	0.93	0.918	0.935304	0.8877	0.9464	0.9352	0.9955	0.8916	0.87	0.94	0.92	0.99	0.9095	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.24833	NA	NA	0.897558	0.977985	NA	0.797	NA	3.9719086
1255	5	1076365	1076365	C	G	intronic	SLC12A7	NA	NA	NA	intronic	ENSG00000113504	NA	NA	NA	NA	NA	5p15.33	NA	NA	NA	NA	rs200705160	0.0032	0.0032	NA	0.00259585	0.0089	NA	0.0029	0.0015	NA	0.01	NA	NA	0.002	0.0112	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.218548	NA	NA	0.008034	0.000685	NA	0.051	NA	3.971866
1255	6	42025318	42025318	G	A	intronic	TAF8	NA	NA	NA	UTR3	ENSG00000137413	ENST00000372978:c.*31G>A	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs12208813	0.1	0.1	0.094	0.100639	0.0924	0.2569	0.0389	0.0068	0.1186	0.09	0.23	0.05	0.01	0.1025	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.087666	NA	NA	NA	NA	NA	0.08	NA	3.9717667
1255	5	75996837	75996837	C	T	intronic	IQGAP2	NA	NA	NA	ncRNA_intronic	ENSG00000225407	NA	NA	NA	NA	NA	5q13.3	NA	NA	NA	NA	rs10942789	0.3	0.3	0.292	0.283946	0.3618	0.2837	0.268	0.3064	0.1851	0.35	0.27	0.27	0.27	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.129107	NA	NA	NA	NA	NA	0.159	NA	3.9715333
1255	5	167517505	167517505	C	G	intronic	TENM2	NA	NA	NA	ncRNA_intronic	ENSG00000253925	NA	NA	NA	NA	NA	5q34	NA	NA	NA	NA	rs2053049	0.45	0.45	0.447	0.483826	0.3618	0.5159	0.451	0.4735	0.6135	0.35	0.54	0.41	0.5	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.404603	NA	NA	NA	NA	NA	0.5	NA	3.9715333
1255	5	170215490	170215490	T	C	intronic	GABRP	NA	NA	NA	ncRNA_intronic	ENSG00000253348	NA	NA	NA	NA	NA	5q35.1	NA	NA	NA	NA	rs4868028	0.47	0.47	0.449	0.47484	0.3618	0.497	0.5504	0.5091	0.4683	0.36	0.51	0.52	0.55	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.892606	NA	NA	NA	NA	NA	0.478	NA	3.9715333
1255	14	81449534	81449534	T	C	intronic	TSHR	NA	NA	NA	ncRNA_exonic	ENSG00000258915	NA	NA	NA	NA	NA	14q31.1	NA	NA	NA	NA	rs3783947	0.45	0.45	0.467	0.432308	0.3618	0.5873	0.4971	0.4145	0.3231	0.34	0.59	0.44	0.47	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.973997	NA	NA	NA	NA	NA	0.471	NA	3.9715333
1255	19	4362761	4362761	G	A	intronic	SH3GL1	NA	NA	NA	intronic	ENSG00000141985	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs116493996	0.02	0.02	0.024	0.0151757	0.0089	NA	0.0101	0.0446	0.001	0.01	NA	0.01	0.05	0.0095	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.589257	NA	NA	0.010116	0.041307	NA	0.022	NA	3.971484
1255	10	107023003	107023003	A	G	intronic	SORCS3	NA	NA	NA	intronic	ENSG00000156395	NA	NA	NA	NA	NA	10q25.1	NA	NA	NA	NA	rs141127316	0.01	0.01	0.002	0.00439297	0.0129	NA	0.0058	0.0008	0.0041	0.01	NA	0.01	0.002	NA	0.016	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.073572	3.073572	NA	0.015713	0.00289	NA	NA	NA	3.971387
1255	3	75466947	75466947	C	A	intergenic	MIR4444-1,FAM86DP	dist=203248;dist=3756	NA	NA	ncRNA_intronic	ENSG00000238278	NA	NA	NA	NA	NA	3p12.3	NA	NA	NA	NA	rs12490872	0.06	0.06	0.064	0.0694888	0.0288	0.0556	0.0432	0.1271	0.0665	0.03	0.05	0.05	0.13	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.541856	NA	NA	NA	NA	NA	0.014	NA	3.9712
1255	5	128448483	128448483	A	G	intronic	ISOC1	NA	NA	NA	intronic	ENSG00000066583	NA	NA	NA	NA	NA	5q23.3	NA	NA	NA	NA	rs114895403	0.02	0.02	0.017	0.0105831	0.0288	NA	0.0274	NA	0.0051	0.03	NA	0.02	NA	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.718901	NA	NA	NA	NA	NA	0.022	NA	3.9712
1255	14	20872101	20872101	A	C	intronic	TEP1	NA	NA	NA	intronic	ENSG00000129566	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs112374310	0.01	0.01	0.013	0.0135783	0.0288	NA	0.0245	0.0023	0.0194	0.03	NA	0.02	NA	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.560209	2.560209	NA	NA	NA	NA	NA	NA	3.9712
1255	18	60028821	60028821	G	T	intronic	TNFRSF11A	NA	NA	NA	intronic	ENSG00000141655	NA	NA	NA	NA	NA	18q21.33	NA	NA	NA	NA	rs35407865	0.15	0.15	0.117	0.151757	0.0288	0.4127	0.147	0.1029	0.0787	0.03	0.36	0.14	0.1	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.389728	NA	NA	NA	NA	NA	0.065	NA	3.9712
1255	1	62921146	62921146	G	A	intronic	DOCK7	NA	NA	NA	intronic	ENSG00000116641	NA	NA	NA	NA	NA	1p31.3	NA	NA	NA	NA	rs146910328	0.01	0.01	0.007	0.00359425	0.0119	NA	0.0072	NA	0.001	0.01	NA	0.01	NA	0.0057	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.012786	4.012786	NA	0.011279	0.002497	NA	0.007	NA	3.971121
1255	3	142257273	142257273	A	C	intronic	ATR	NA	NA	NA	intronic	ENSG00000175054	NA	NA	NA	NA	NA	3q23	NA	NA	NA	NA	rs142734498	0.01	0.01	0.004	0.00299521	0.0099	NA	0.0029	0.0015	0.001	0.01	NA	NA	0.002	0.009	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.682126	NA	NA	0.010051	0.001839	NA	NA	NA	3.971049
1255	3	42304784	42304784	A	G	intronic	CCK	NA	NA	NA	intronic	ENSG00000187094	NA	NA	NA	NA	NA	3p22.1	NA	Name=TBP	NA	NA	rs1868522	0.52	0.52	0.489	0.548323	0.4871	0.5506	0.5476	0.5219	0.6452	0.5	0.54	0.54	0.53	0.5421	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.862733	NA	NA	NA	NA	NA	0.536	NA	3.9708
1255	9	19423823	19423823	A	C	intronic	ACER2	NA	NA	NA	intronic	ENSG00000177076	NA	NA	NA	NA	NA	9p22.1	NA	NA	NA	NA	rs80061852	0.01	0.01	0.015	0.0153754	0.0109	NA	0.0029	0.031	0.0235	0.01	NA	0.0028	0.03	0.01	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.707852	NA	NA	0.008374	0.027009	NA	0.007	NA	3.970726
1255	16	3080632	3080632	C	T	intronic	CCDC64B	NA	NA	NA	intronic	ENSG00000162069	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs182123535	0.0037	0.0037	NA	0.00379393	0.007	0.001	0.013	NA	0.002	0.01	NA	0.01	NA	0.0116	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.897688	NA	NA	0.0107	0.003128	NA	NA	NA	3.9707
1255	12	52862783	52862783	G	A	UTR3	KRT6C	NM_173086:c.*63C>T	NA	NA	UTR3	ENSG00000170465	ENST00000252250:c.*63C>T	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs2568	0.33	0.33	0.287	0.2502	0.3628	0.4812	0.2651	0.0242	0.1912	0.36	0.56	0.32	0.04	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.313653	1.313653	NA	NA	NA	NA	0.362	NA	3.9705334
1255	15	45567529	45567529	T	C	intronic	SLC28A2	NA	NA	NA	ncRNA_intronic	ENSG00000259520	NA	NA	NA	NA	NA	15q21.1	NA	NA	NA	NA	rs12440356	0.52	0.52	0.5	0.514377	0.3628	0.8819	0.5548	0.3268	0.5164	0.34	0.94	0.51	0.33	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.370334	NA	NA	NA	NA	NA	0.406	NA	3.9705333
1255	15	101448783	101448783	G	A	intronic	ALDH1A3	NA	NA	NA	ncRNA_intronic	ENSG00000259583	NA	NA	NA	NA	NA	15q26.3	NA	NA	NA	NA	rs4646687	0.2	0.2	0.223	0.247604	0.3628	0.1181	0.1916	0.0658	0.5481	0.36	0.1	0.21	0.07	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.79034	NA	NA	NA	NA	NA	0.326	NA	3.9705333
1255	12	59272586	59272586	A	C	intronic	LRIG3	NA	NA	NA	intronic	ENSG00000139263	NA	NA	NA	NA	NA	12q14.1	NA	NA	NA	NA	rs184949213	0.0037	0.0037	NA	0.0091853	0.0089	NA	0.0101	NA	0.0307	0.01	NA	0.01	NA	0.0099	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.499308	1.499308	NA	0.010698	0.001816	NA	0.007	NA	3.970502
1255	16	2027500	2027500	C	T	intronic	TBL3	NA	NA	NA	intronic	ENSG00000183751	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs144057628	0.01	0.01	0.003	0.00479233	0.0109	NA	0.0115	0.0008	0.0041	0.01	NA	0.02	0.002	0.0091	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.406534	NA	NA	0.009539	0.000911	NA	NA	NA	3.970461
1255	19	36276086	36276086	C	T	intronic	ARHGAP33	NA	NA	NA	intronic	ENSG00000004777	NA	NA	NA	NA	NA	19q13.12	NA	Name=CTCF	NA	NA	rs2239949	0.4	0.4	0.364	0.401957	0.329	0.4851	0.3862	0.3147	0.5204	0.32	0.52	0.38	0.37	0.3786	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.25584	NA	NA	0.322193	0.30193	NA	0.377	NA	3.970207
1255	7	30695388	30695388	A	G	intronic	CRHR2	NA	NA	NA	intronic	ENSG00000106113	NA	NA	NA	NA	NA	7p14.3	NA	NA	NA	NA	rs111415208	0.08	0.08	0.093	0.0950479	0.0298	NA	0.0576	0.3064	0.001	0.03	NA	0.05	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.681882	NA	NA	NA	NA	NA	0.159	NA	3.9702
1255	7	30695406	30695406	G	A	intronic	CRHR2	NA	NA	NA	intronic	ENSG00000106113	NA	NA	NA	NA	NA	7p14.3	NA	NA	NA	NA	rs7812133	0.08	0.08	0.085	0.0950479	0.0298	NA	0.0576	0.3064	0.001	0.03	NA	0.05	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.739305	NA	NA	NA	NA	NA	0.159	NA	3.9702
1255	8	79629455	79629455	C	T	intronic	ZC2HC1A	NA	NA	NA	intronic	ENSG00000104427	NA	NA	NA	NA	NA	8q21.12	NA	NA	NA	NA	rs76261772	0.02	0.02	0.009	0.0101837	0.0298	NA	0.0187	NA	0.0082	0.03	NA	0.03	NA	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.710846	1.710846	NA	NA	NA	NA	NA	NA	3.9702
1255	9	131115599	131115599	C	T	intronic	SLC27A4	NA	NA	NA	intronic	ENSG00000167114	NA	NA	NA	NA	NA	9q34.11	NA	NA	NA	NA	rs36002272	0.01	0.01	0.012	0.0117812	0.0298	0.001	0.0202	0.0015	0.0123	0.03	0.0017	0.02	0.0041	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.462064	NA	NA	NA	NA	NA	0.014	NA	3.9702
1255	14	53178303	53178303	C	A	intronic	PSMC6	NA	NA	NA	intronic	ENSG00000100519	NA	NA	NA	NA	NA	14q22.1	NA	NA	NA	NA	rs10483616	0.07	0.07	0.067	0.0613019	0.0298	0.1577	0.1268	0.0023	0.0276	0.03	0.16	0.1	0.01	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.061077	NA	NA	NA	NA	NA	0.138	NA	3.9702
1255	22	30836313	30836313	T	C	intergenic	MTFP1,SEC14L3	dist=11272;dist=18903	NA	NA	downstream	ENSG00000230137	NA	NA	NA	Score=407;Name=lod=60	NA	22q12.2	NA	NA	NA	NA	rs5753137	0.54	0.54	0.549	0.554313	0.5298	0.4623	0.5173	0.7209	0.4755	0.52	0.46	0.48	0.72	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.763234	NA	NA	NA	NA	NA	0.638	NA	3.9702
1255	20	17923717	17923717	A	C	intronic	SNX5	NA	NA	NA	intronic	ENSG00000089006	NA	NA	NA	NA	NA	20p11.23	NA	NA	NA	NA	rs145873414	0.01	0.01	0.006	0.00419329	0.0089	NA	0.0086	0.0015	0.0041	0.01	NA	0.01	0.01	0.0085	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.926942	NA	NA	0.012442	0.002724	NA	0.029	NA	3.970158
1255	14	106091329	106091329	G	C	intergenic	TMEM121,ELK2AP	dist=94790;dist=44585	NA	NA	exonic	ENSG00000211892	NA	nonsynonymous SNV	ENSG00000211892:ENST00000390543:exon3:c.C565G:p.L189V	NA	NA	14q32.33	NA	NA	NA	NA	rs8015545	0.2	0.2	0.129	0.244808	0.2913	0.5238	0.2003	0.0159	0.2505	0.24	0.32	0.19	0.01	0.2827	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.97037	NA	NA	0.289314	0.066317	NA	0.007	NA	3.9700194
1255	6	109770999	109770999	G	C	intronic	MICAL1	NA	NA	NA	intronic	ENSG00000135596	NA	NA	NA	NA	NA	6q21	NA	NA	Name=6	NA	rs752262	0.32	0.32	0.3	0.300919	0.3529	0.3502	0.3112	0.1536	0.3885	0.35	0.42	0.31	0.15	0.3368	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.777154	1.777154	NA	0.340349	0.179528	NA	0.254	NA	3.969951
1255	4	1976530	1976530	C	T	intronic	WHSC1	NA	NA	NA	intronic	ENSG00000109685	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs150150439	0.01	0.01	0.005	0.00479233	0.007	NA	0.013	0.0038	0.0031	0.01	NA	0.02	0.01	0.009	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.880112	1.880112	NA	0.014063	0.001142	NA	NA	NA	3.969937
1255	12	58202123	58202123	G	A	intronic	AVIL	NA	NA	NA	intronic	ENSG00000135407	NA	NA	NA	NA	NA	12q14.1	NA	NA	NA	NA	rs74724134	0.01	0.01	0.006	0.0071885	0.0099	NA	0.0072	NA	0.0215	0.01	NA	0.01	NA	0.0097	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.730582	NA	NA	0.010465	0.000908	NA	NA	NA	3.969935
1255	19	47341827	47341827	G	A	intronic	AP2S1	NA	NA	NA	intronic	ENSG00000042753	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs45527038	0.01	0.01	0.005	0.00638978	0.0119	NA	0.0187	NA	0.0072	0.01	NA	0.01	NA	0.0077	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.404861	NA	NA	0.010465	0.001816	NA	NA	NA	3.969935
1255	2	241808491	241808491	T	A	intronic	AGXT	NA	NA	NA	intronic	ENSG00000172482	NA	NA	NA	NA	NA	2q37.3	NA	NA	NA	NA	rs58120546	0.14	0.14	0.078	NA	NA	NA	NA	NA	NA	0.19	0.08	0.13	0.15	0.0302	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.442053	NA	NA	NA	NA	NA	0.101	NA	3.9698
1255	9	135765261	135765261	C	T	intronic	C9orf9	NA	NA	NA	UTR3	ENSG00000165698	ENST00000372136:c.*1263C>T,ENST00000356311:c.*1263C>T	NA	NA	NA	NA	9q34.13	NA	NA	NA	NA	rs2231410	0.07	0.07	0.068	0.0688898	0.0924	0.001	0.0821	0.1278	0.0256	0.08	NA	0.1	0.1	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.632673	NA	NA	0.104651	0.116329	NA	0.058	NA	3.9696157
1255	7	98645565	98645565	C	G	intronic	SMURF1	NA	NA	NA	ncRNA_exonic	ENSG00000242687	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs219825	0.47	0.47	0.488	0.519968	0.3638	0.4494	0.3199	0.8003	0.5164	0.37	0.4	0.36	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.631441	NA	NA	NA	NA	ID=COSN168154;OCCURENCE=1(large_intestine)	0.543	NA	3.9695333
1255	17	1585622	1585622	T	C	intronic	PRPF8	NA	NA	NA	intronic	ENSG00000174231	NA	NA	NA	NA	NA	17p13.3	NA	NA	NA	NA	rs147307860	0.0041	0.0041	0.002	0.00299521	0.0109	NA	0.0014	0.0008	0.002	0.01	NA	NA	NA	0.0081	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.22629	NA	NA	0.011512	0.001589	NA	NA	NA	3.969488
1255	19	54721119	54721119	G	A	intronic	LILRB3	NA	NA	NA	intronic	ENSG00000170889,ENSG00000204577,ENSG00000244482	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs200951745	0.01	0.01	NA	0.0061901	0.0129	NA	0.0014	0.0008	0.0164	0.01	NA	0.0028	NA	0.0102	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.07758	NA	NA	0.007562	0.001135	NA	NA	NA	3.969338
1255	1	35475943	35475943	C	G	intronic	ZMYM6	NA	NA	NA	intronic	ENSG00000163867,ENSG00000271741	NA	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	rs9919282	0.29	0.29	0.325	0.318091	0.0308	0.3829	0.1167	0.7163	0.1513	0.02	0.38	0.12	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.632255	NA	NA	NA	NA	NA	0.29	NA	3.9692
1255	3	184021626	184021626	C	T	intronic	PSMD2	NA	NA	NA	intronic	ENSG00000145191,ENSG00000175166	NA	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs60496486	0.07	0.07	0.01	0.0712859	0.0308	0.0179	0.0317	0.1936	0.0307	0.03	0.03	0.03	0.19	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.289405	NA	NA	NA	NA	NA	NA	NA	3.9692
1255	5	6632143	6632143	T	C	intronic	NSUN2	NA	NA	NA	intronic	ENSG00000037474	NA	NA	NA	NA	NA	5p15.31	NA	NA	NA	NA	rs114793623	0.02	0.02	0.013	0.0105831	0.0308	NA	0.0259	0.003	NA	0.03	NA	0.04	0.002	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.767576	NA	NA	NA	NA	NA	0.014	NA	3.9692
1255	8	141568480	141568480	G	C	intronic	AGO2	NA	NA	NA	intronic	ENSG00000123908	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs148404917	0.02	0.02	0.009	0.0103834	0.0308	NA	0.0245	0.0008	0.0031	0.04	NA	0.02	0.002	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.97018	NA	NA	NA	NA	NA	0.036	NA	3.9692
1255	12	62628672	62628672	A	G	intergenic	FAM19A2,USP15	dist=42052;dist=25449	NA	NA	ncRNA_exonic	ENSG00000258316	NA	NA	NA	NA	NA	12q14.1	NA	NA	NA	NA	rs138155396	0.02	0.02	0.009	0.0125799	0.0308	0.001	0.0202	0.0008	0.0164	0.03	NA	0.02	0.002	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.167921	NA	NA	NA	NA	NA	0.051	NA	3.9692
1255	12	114395959	114395959	T	C	intronic	RBM19	NA	NA	NA	intronic	ENSG00000122965	NA	NA	NA	NA	NA	12q24.21	NA	NA	NA	NA	rs73401073	0.15	0.15	0.145	0.176717	0.0308	0.1131	0.2824	0.3979	0.0184	0.03	0.13	0.23	0.28	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.176032	NA	NA	NA	NA	NA	0.152	NA	3.9692
1255	19	13325229	13325229	G	C	intronic	CACNA1A	NA	NA	NA	intronic	ENSG00000141837	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs17846925	0.04	0.04	0.041	0.0529153	0.0308	0.0149	0.013	0.0923	0.09	0.03	0.02	0.01	0.09	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.997791	NA	NA	NA	NA	NA	0.072	NA	3.9692
1255	16	57017474	57017474	G	A	intronic	CETP	NA	NA	NA	intronic	ENSG00000087237	NA	NA	NA	NA	NA	16q13	NA	Name=HNF4A_(H-171),HNF4G_(SC-6558),CTCF	Name=11	NA	rs289741	0.61	0.61	0.578	0.583866	0.6789	0.6905	0.7075	0.3638	0.5859	0.68	0.65	0.7	0.39	0.6554	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.540116	NA	NA	0.696512	0.417652	NA	0.659	NA	3.969188
1255	11	60285518	60285518	G	A	intronic	MS4A13	NA	NA	NA	intronic	ENSG00000204979	NA	NA	NA	NA	NA	11q12.2	NA	NA	NA	NA	rs75015159	0.01	0.01	0.013	0.0125799	0.008	0.001	0.013	0.034	NA	0.01	NA	0.01	0.02	0.0105	0.023	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.335478	NA	NA	0.012567	0.022923	NA	NA	NA	3.968933
1255	12	53295063	53295063	T	C	intronic	KRT8	NA	NA	NA	intronic	ENSG00000170421	NA	NA	NA	NA	NA	12q13.13	NA	Name=Pol2	NA	NA	rs5019799	0.54	0.54	0.54	0.567292	0.5318	0.6042	0.6167	0.3986	0.7587	0.51	0.64	0.57	0.46	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.89196	NA	NA	0.499371	0.410405	NA	0.391	NA	3.968829
1255	1	197091537	197091537	A	T	exonic	ASPM	NA	synonymous SNV	ASPM:NM_001206846:exon14:c.T3579A:p.S1193S,ASPM:NM_018136:exon14:c.T3579A:p.S1193S	exonic	ENSG00000066279	NA	synonymous SNV	ENSG00000066279:ENST00000367408:exon10:c.T1329A:p.S443S,ENSG00000066279:ENST00000294732:exon14:c.T3579A:p.S1193S,ENSG00000066279:ENST00000367409:exon14:c.T3579A:p.S1193S	NA	NA	1q31.3	NA	NA	NA	NA	rs4915337	0.82	0.82	0.793	0.782548	0.9125	1	0.8804	0.379	0.9008	0.92	1	0.9	0.4	0.8779	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.277788	NA	NA	0.907442	0.45665	NA	0.717	CLINSIG=non-pathogenic;CLNDBN=Primary_autosomal_recessive_microcephaly_5;CLNREVSTAT=single;CLNACC=RCV000020768.1;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet;CLNDSDBID=NBK9587:C1837501:608716:ORPHA2512	3.9688246
1255	17	33513649	33513649	A	G	UTR3	UNC45B	NM_001267052:c.*71A>G,NM_001033576:c.*71A>G,NM_173167:c.*71A>G	NA	NA	UTR3	ENSG00000141161	ENST00000378449:c.*71A>G,ENST00000433649:c.*71A>G,ENST00000268876:c.*71A>G,ENST00000394570:c.*71A>G	NA	NA	NA	NA	17q12	NA	NA	NA	NA	rs3744366	0.5	0.5	0.532	0.507388	0.3648	0.5575	0.4135	0.6679	0.4519	0.37	0.58	0.4	0.69	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.123303	NA	NA	NA	NA	NA	0.609	NA	3.9685334
1255	15	84700042	84700042	G	A	intronic	ADAMTSL3	NA	NA	NA	intronic	ENSG00000156218	NA	NA	NA	NA	NA	15q25.2	NA	NA	NA	NA	rs79074742	0.0018	0.0018	0.002	0.00219649	0.008	NA	0.0029	NA	0.001	0.004	NA	0.0028	NA	0.0085	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.428459	NA	NA	0.015003	0.002724	NA	0.014	NA	3.968497
1255	5	150934284	150934284	T	G	intronic	FAT2	NA	NA	NA	intronic	ENSG00000086570	NA	NA	NA	NA	NA	5q33.1	NA	NA	NA	NA	rs116811073	0.01	0.01	0.005	0.00239617	0.0089	NA	0.0043	NA	NA	0.01	NA	0.01	NA	0.009	0.014	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.382734	NA	NA	0.013721	0.003404	NA	0.007	NA	3.968379
1255	1	6645903	6645903	A	T	intronic	ZBTB48	NA	NA	NA	intronic	ENSG00000204859	NA	NA	NA	NA	NA	1p36.31	NA	NA	NA	NA	rs6697222	0.01	0.01	0.006	0.00838658	0.0318	NA	0.0072	0.0008	0.0041	0.03	NA	0.01	0.002	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.449957	NA	NA	NA	NA	NA	NA	NA	3.9682
1255	1	236389454	236389454	T	C	intronic	ERO1LB	NA	NA	NA	intronic	ENSG00000086619	NA	NA	NA	NA	NA	1q42.3	NA	NA	NA	NA	rs12023980	0.15	0.15	0.158	0.14377	0.0318	0.373	0.0778	0.1006	0.1278	0.03	0.4	0.06	0.1	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.698342	NA	NA	NA	NA	NA	0.101	NA	3.9682
1255	1	236389500	236389500	T	A	intronic	ERO1LB	NA	NA	NA	intronic	ENSG00000086619	NA	NA	NA	NA	NA	1q42.3	NA	NA	NA	NA	rs12023983	0.15	0.15	0.149	0.14377	0.0318	0.373	0.0778	0.1006	0.1278	0.03	0.4	0.06	0.1	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.467835	1.467835	NA	NA	NA	NA	0.101	NA	3.9682
1255	1	236399752	236399752	T	C	intronic	ERO1LB	NA	NA	NA	intronic	ENSG00000086619	NA	NA	NA	NA	NA	1q42.3	NA	NA	NA	NA	rs3768099	0.15	0.15	0.149	0.144968	0.0318	0.372	0.0778	0.1059	0.1278	0.03	0.4	0.06	0.1	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.295865	NA	NA	NA	NA	NA	0.123	NA	3.9682
1255	1	236399772	236399772	C	T	intronic	ERO1LB	NA	NA	NA	intronic	ENSG00000086619	NA	NA	NA	NA	NA	1q42.3	NA	NA	NA	NA	rs3768100	0.13	0.13	0.132	0.122604	0.0318	0.372	0.0648	0.0287	0.1268	0.03	0.4	0.05	0.04	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.209469	NA	NA	NA	NA	NA	0.094	NA	3.9682
1255	6	152470519	152470519	G	T	intronic	SYNE1	NA	NA	NA	intronic	ENSG00000131018	NA	NA	NA	NA	NA	6q25.1	NA	NA	NA	NA	rs2813492	0.03	0.03	0.016	0.023762	0.0318	NA	0.0994	0.0008	0.0174	0.04	NA	0.09	NA	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.036823	NA	NA	NA	NA	NA	0.022	NA	3.9682
1255	7	24905179	24905179	T	C	intronic	OSBPL3	NA	NA	NA	intronic	ENSG00000070882	NA	NA	NA	NA	NA	7p15.3	NA	NA	NA	NA	rs41275967	0.03	0.03	0.018	0.0199681	0.0318	NA	0.0706	0.003	0.0153	0.04	NA	0.07	0.01	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.472876	NA	NA	NA	NA	NA	0.007	NA	3.9682
1255	12	18865644	18865644	C	A	intronic	PLCZ1	NA	NA	NA	intronic	ENSG00000139151	NA	NA	NA	NA	NA	12p12.3	NA	NA	NA	NA	rs117677700	0.02	0.02	0.012	0.0105831	0.0318	0.001	0.013	0.0023	0.0082	0.03	NA	0.01	0.01	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.091567	NA	NA	NA	NA	NA	0.065	NA	3.9682
1255	16	20599507	20599507	C	G	intergenic	ACSM2B,ACSM1	dist=11812;dist=35052	NA	NA	ncRNA_intronic	ENSG00000260762	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs141896208	0.02	0.02	0.012	0.0229633	0.0318	0.0268	0.0274	0.0038	0.0327	0.03	0.02	0.02	0.0041	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.299422	NA	NA	NA	NA	NA	0.007	NA	3.9682
1255	11	102816343	102816343	C	G	intronic	MMP13	NA	NA	NA	intronic	ENSG00000137745	NA	NA	NA	NA	NA	11q22.2	NA	NA	NA	NA	rs3758853	0.06	0.06	0.063	0.072484	0.004	0.0992	0.0202	0.1604	0.0337	0.004	0.07	0.02	0.17	0.0257	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.379635	NA	NA	0.002327	0.137045	NA	0.094	NA	3.967973
1255	14	103923475	103923475	A	G	intronic	MARK3	NA	NA	NA	intronic	ENSG00000075413	NA	NA	NA	Score=655;Name=lod=613	NA	14q32.32	NA	NA	NA	NA	rs2273699	0.32	0.32	0.31	0.296526	0.3499	0.1528	0.245	0.3729	0.3231	0.38	0.18	0.28	0.43	0.3202	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.453143	NA	NA	0.362023	0.337094	NA	0.283	NA	3.967877
1255	17	4646772	4646772	A	G	intronic	ZMYND15	NA	NA	NA	intronic	ENSG00000141497	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs73973614	0.08	0.08	0.091	0.0952476	0.002	NA	0.0303	0.3434	NA	0.0026	NA	0.03	0.31	0.0283	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.385067	NA	NA	0.001977	0.297776	NA	0.08	NA	3.967723
1255	16	22376218	22376218	A	T	intronic	CDR2	NA	NA	NA	intronic	ENSG00000140743	NA	NA	NA	NA	NA	16p12.2	NA	NA	NA	NA	rs118111122	0.01	0.01	0.008	0.0163738	0.007	0.0248	0.0014	0.0015	0.0481	0.01	0.03	0.0028	NA	0.0158	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.707465	1.707465	NA	0.009651	0.002959	NA	0.022	NA	3.967549
1255	17	73647139	73647139	A	G	UTR3	RECQL5	NM_001003716:c.*123T>C	NA	NA	UTR3	ENSG00000108469	ENST00000420326:c.*123T>C	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs1661745	0.43	0.43	0.466	0.502995	0.3658	0.5109	0.4409	0.6566	0.4724	0.32	0.48	0.36	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.124586	NA	NA	NA	NA	NA	0.087	NA	3.9675334
1255	2	26437255	26437255	G	C	intronic	HADHA	NA	NA	NA	intronic	ENSG00000084754	NA	NA	NA	NA	NA	2p23.3	NA	NA	NA	NA	rs113877517	0.02	0.02	0.014	0.0153754	0.0328	NA	0.0389	0.0038	0.0123	0.04	NA	0.05	0.01	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.18945	NA	NA	NA	NA	NA	0.007	NA	3.9672
1255	4	5747152	5747152	A	G	intronic	EVC	NA	NA	NA	intronic	ENSG00000072840	NA	NA	NA	NA	NA	4p16.2	NA	NA	NA	NA	rs16837617	0.05	0.05	0.055	0.0537141	0.0328	NA	0.0418	0.152	0.0061	0.03	NA	0.04	0.12	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.130327	NA	NA	NA	NA	NA	0.072	NA	3.9672
1255	14	21058337	21058337	C	T	UTR5;UTR3	RNASE11;RNASE12	NM_145250:c.-5704G>A;NM_001024822:c.*102G>A	NA	NA	ncRNA_UTR5	ENSG00000173464	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs4981259	0.4	0.4	0.337	0.392372	0.5328	0.3492	0.4092	0.2239	0.5082	0.52	0.36	0.43	0.22	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.293839	NA	NA	NA	NA	NA	0.449	NA	3.9672
1255	20	37518095	37518095	G	A	intronic	PPP1R16B	NA	NA	NA	intronic	ENSG00000101445	NA	NA	NA	NA	NA	20q11.23	NA	NA	NA	NA	rs77180789	0.02	0.02	0.022	0.028155	0.0328	0.001	0.0173	0.0454	0.0358	0.03	NA	0.02	0.04	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.595504	NA	NA	NA	NA	NA	0.014	NA	3.9672
1255	21	43256442	43256442	C	T	intronic	PRDM15	NA	NA	NA	intronic	ENSG00000141956	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs75462889	0.02	0.02	0.017	0.0213658	0.0328	0.001	0.0331	0.0045	0.045	0.04	NA	0.04	0.01	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.137426	NA	NA	NA	NA	NA	0.022	NA	3.9672
1255	4	156276289	156276289	C	T	exonic	MAP9	NA	synonymous SNV	MAP9:NM_001039580:exon10:c.G1314A:p.V438V	exonic	ENSG00000164114	NA	synonymous SNV	ENSG00000164114:ENST00000311277:exon10:c.G1314A:p.V438V,ENSG00000164114:ENST00000433024:exon10:c.G1311A:p.V437V,ENSG00000164114:ENST00000515654:exon10:c.G1242A:p.V414V	NA	NA	4q32.1	NA	NA	NA	NA	rs2341894	0.75	0.75	0.766	0.739816	0.5616	0.9266	0.5533	0.9546	0.5726	0.58	0.93	0.55	0.93	0.5998	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.153751	NA	NA	0.538119	0.892628	NA	0.601	NA	3.9671476
1255	18	6890434	6890434	A	G	exonic	ARHGAP28	NA	synonymous SNV	ARHGAP28:NM_001010000:exon13:c.A1263G:p.P421P	exonic	ENSG00000088756	NA	synonymous SNV	ENSG00000088756:ENST00000314319:exon12:c.A1263G:p.P421P,ENSG00000088756:ENST00000418986:exon12:c.A1263G:p.P421P,ENSG00000088756:ENST00000532996:exon12:c.A1209G:p.P403P,ENSG00000088756:ENST00000419673:exon13:c.A1263G:p.P421P,ENSG00000088756:ENST00000531294:exon13:c.A1248G:p.P416P,ENSG00000088756:ENST00000262227:exon14:c.A1584G:p.P528P,ENSG00000088756:ENST00000383472:exon14:c.A1740G:p.P580P,ENSG00000088756:ENST00000400091:exon14:c.A1740G:p.P580P	NA	NA	18p11.31	NA	NA	NA	NA	rs1116757	0.59	0.59	0.585	0.563099	0.5686	0.6052	0.5331	0.5719	0.5235	0.55	0.68	0.55	0.57	0.5692	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.224884	NA	NA	0.56186	0.574217	NA	0.572	NA	3.9670066
1255	17	74272068	74272068	C	T	intronic	QRICH2	NA	NA	NA	intronic	ENSG00000129646	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs138950766	0.01	0.01	0.008	0.0091853	0.0119	NA	0.0072	0.0008	0.0286	0.01	NA	0.01	NA	0.0095	0.012	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.265946	NA	NA	0.011628	0.003177	NA	NA	NA	3.966972
1255	7	100552536	100552536	T	C	intergenic	ACHE,MUC12	dist=58995;dist=60368	NA	NA	exonic	ENSG00000169894	NA	synonymous SNV	ENSG00000169894:ENST00000319509:exon1:c.T1287C:p.S429S	NA	NA	7q22.1	NA	NA	NA	NA	rs73163759	NA	NA	NA	0.153355	0.0258	0.0149	0.0677	0.3691	0.1963	NA	NA	NA	NA	0.5073	0.054	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.104935	NA	NA	NA	NA	NA	0.051	NA	3.9669
1255	22	41282558	41282558	G	A	intronic	XPNPEP3	NA	NA	NA	intronic	ENSG00000196236	NA	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs148023469	0.01	0.01	0.01	0.00259585	0.0099	NA	0.0014	0.0015	NA	0.01	NA	NA	0.01	0.0083	0.015	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.96003	NA	NA	0.015	0.004773	NA	NA	NA	3.9668
1255	19	19387743	19387743	A	C	intronic	SUGP1	NA	NA	NA	intronic	ENSG00000105705	NA	NA	NA	NA	NA	19p13.11	NA	NA	Name=3	NA	rs2074550	0.41	0.41	0.42	0.463458	0.3111	0.3264	0.4524	0.6475	0.5204	0.3	0.33	0.44	0.66	0.3865	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.718392	NA	NA	0.335698	0.615751	NA	0.464	NA	3.966702
1255	1	197030201	197030201	T	C	exonic	F13B	NA	synonymous SNV	F13B:NM_001994:exon4:c.A456G:p.T152T	exonic	ENSG00000143278	NA	synonymous SNV	ENSG00000143278:ENST00000367412:exon4:c.A456G:p.T152T	Score=309;Name=lod=24	NA	1q31.3	NA	NA	NA	NA	rs5997	0.82	0.82	0.776	0.783746	0.9125	1	0.8804	0.382	0.9029	0.92	1	0.9	0.41	0.8805	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.716491	NA	NA	0.907071	0.461643	NA	0.58	NA	3.9665956
1255	16	24888710	24888710	T	C	intronic	SLC5A11	NA	NA	NA	intronic	ENSG00000158865	NA	NA	NA	NA	NA	16p12.1	NA	NA	NA	NA	rs150243842	0.0046	0.0046	0.004	0.00279553	0.008	0.001	0.0014	NA	0.0041	0.01	NA	0.01	NA	0.0094	0.016	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.309363	NA	NA	0.016047	0.003414	NA	NA	NA	3.966553
1255	1	183616687	183616687	G	A	UTR3	APOBEC4	NM_203454:c.*126C>T	NA	NA	UTR3	ENSG00000173627	ENST00000308641:c.*126C>T	NA	NA	NA	NA	1q25.3	NA	NA	NA	NA	rs1174656	0.25	0.25	0.237	0.233227	0.3668	0.0843	0.2968	0.1997	0.2495	0.36	0.08	0.33	0.22	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.171784	NA	NA	NA	NA	NA	0.297	NA	3.9665334
1255	6	30032495	30032495	A	G	UTR3	ZNRD1	NM_170783:c.*21A>G,NM_014596:c.*21A>G	NA	NA	UTR3	ENSG00000066379	ENST00000332435:c.*21A>G,ENST00000376782:c.*21A>G,ENST00000359374:c.*21A>G,ENST00000376785:c.*21A>G	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs1048412	0.18	0.18	0.193	0.190895	0.0954	0.1885	0.1744	0.2988	0.1575	0.09	0.2	0.2	0.3	0.1517	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.502318	NA	NA	0.119786	0.255129	NA	0.167	NA	3.9664474
1255	6	110736610	110736610	T	C	intronic	DDO	NA	NA	NA	intronic	ENSG00000203797	NA	NA	NA	NA	NA	6q21	NA	NA	Name=2	NA	rs9384742	0.69	0.69	0.713	0.716254	0.5129	0.8562	0.4352	0.9327	0.6881	0.51	0.87	0.47	0.92	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.288183	1.288183	NA	0.520742	0.87211	NA	0.688	NA	3.966358
1255	10	82896954	82896954	G	A	intergenic	SH2D4B,NRG3	dist=490638;dist=738116	NA	NA	ncRNA_exonic	ENSG00000226466	NA	NA	NA	NA	NA	10q23.1	NA	NA	NA	NA	rs12769310	0.02	0.02	0.016	0.0239617	0.0338	NA	0.0418	0.0333	0.0133	0.03	NA	0.05	0.02	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.070062	NA	NA	NA	NA	NA	0.007	NA	3.9662
1255	3	29529846	29529846	G	A	intronic	RBMS3	NA	NA	NA	intronic	ENSG00000144642	NA	NA	NA	NA	NA	3p24.1	NA	NA	NA	NA	rs3773020	0.09	0.09	0.098	0.0938498	0.0338	0.0516	0.1167	0.1929	0.0491	0.04	0.06	0.1	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.073995	NA	NA	NA	NA	NA	0.109	NA	3.9662
1255	3	57168154	57168154	G	A	intronic	IL17RD	NA	NA	NA	intronic	ENSG00000144730	NA	NA	NA	NA	NA	3p14.3	NA	NA	NA	NA	rs116627710	0.02	0.02	0.016	0.0205671	0.0338	0.0079	0.036	0.0008	0.0358	0.03	0.01	0.03	0.002	NA	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.921377	NA	NA	NA	NA	NA	0.022	NA	3.9662
1255	6	17779730	17779730	C	T	intronic	KIF13A	NA	NA	NA	intronic	ENSG00000137177	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs187226021	0.02	0.02	NA	0.00958466	0.0338	NA	0.013	NA	0.0051	0.04	NA	0.02	NA	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.759397	NA	NA	NA	NA	NA	0.014	NA	3.9662
1255	11	2549061	2549061	G	C	intronic	KCNQ1	NA	NA	NA	intronic	ENSG00000053918	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs28730663	0.08	0.08	0.063	0.0886581	0.0338	0.0437	0.0548	0.1906	0.0777	0.03	0.06	0.06	0.18	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.911929	NA	NA	NA	NA	NA	0.051	NA	3.9662
1255	11	113846006	113846006	T	C	UTR5	HTR3A	NM_213621:c.-24T>C,NM_000869:c.-24T>C	NA	NA	UTR5	ENSG00000166736	ENST00000504030:c.-42T>C,ENST00000375498:c.-24T>C,ENST00000355556:c.-24T>C,ENST00000506841:c.-42T>C	NA	NA	NA	NA	11q23.2	NA	Name=CTCF_(SC-5916),ZNF263,KAP1,c-Myc,E2F6,YY1_(C-20),TAF1,CTCF,Max	Name=50	NA	rs1062613	0.77	0.77	0.737	0.751797	0.7823	0.8532	0.8314	0.4992	0.9008	0.79	0.89	0.82	0.54	0.7964	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.380669	1.380669	NA	0.788524	0.547024	NA	0.746	NA	3.9661094
1255	8	100871741	100871741	C	A	intronic	VPS13B	NA	NA	NA	intronic	ENSG00000132549	NA	NA	NA	NA	NA	8q22.2	NA	NA	NA	NA	rs72676269	0.01	0.01	0.004	0.00339457	0.0129	NA	0.0058	NA	NA	0.01	NA	0.01	NA	0.0092	0.012	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.667507	NA	NA	0.012093	0.004085	NA	0.058	NA	3.965807
1255	5	95732986	95732986	T	C	intronic	PCSK1	NA	NA	NA	ncRNA_intronic	ENSG00000251314	NA	NA	NA	NA	NA	5q15	NA	NA	NA	NA	rs271920	0.35	0.35	0.355	0.35643	0.3678	0.2401	0.4121	0.4592	0.2863	0.35	0.26	0.44	0.4	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.084383	NA	NA	NA	NA	NA	0.449	NA	3.9655333
1255	16	84600595	84600595	T	C	intronic	COTL1	NA	NA	NA	intronic	ENSG00000103187	NA	NA	NA	NA	NA	16q24.1	NA	NA	Name=2	NA	rs12929880	0.21	0.21	0.206	0.224042	0.3598	0.0327	0.1974	0.1936	0.3415	0.35	0.04	0.27	0.17	0.3087	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.091789	NA	NA	0.366163	0.205548	NA	0.275	NA	3.965337
1255	5	150712767	150712767	C	T	intronic	SLC36A2	NA	NA	NA	intronic	ENSG00000186335	NA	NA	NA	NA	NA	5q33.1	NA	NA	NA	NA	rs77349378	0.01	0.01	0.004	0.00299521	0.0129	NA	0.0014	0.0008	NA	0.01	NA	0.01	0.002	0.0099	0.012	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.600074	NA	NA	0.011977	0.002724	NA	NA	NA	3.965223
1255	1	224484410	224484410	C	A	intronic	NVL	NA	NA	NA	intronic	ENSG00000143748	NA	NA	NA	NA	NA	1q42.11	NA	NA	NA	NA	rs16846214	0.15	0.15	0.156	0.178315	0.0348	0.1101	0.0677	0.4675	0.0838	0.03	0.1	0.07	0.44	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.221086	NA	NA	NA	NA	NA	0.174	NA	3.9652
1255	7	76903217	76903217	T	C	intronic	CCDC146	NA	NA	NA	intronic	ENSG00000135205	NA	NA	NA	NA	NA	7q11.23	NA	NA	NA	NA	rs7810561	0.08	0.08	0.089	0.0898562	0.0348	0.0595	0.0389	0.1853	0.0849	0.03	0.08	0.04	0.17	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.024873	NA	NA	NA	NA	NA	0.072	NA	3.9652
1255	8	41555736	41555736	C	T	intronic	ANK1	NA	NA	NA	intronic	ENSG00000029534	NA	NA	NA	NA	NA	8p11.21	NA	NA	NA	NA	rs55935493	0.05	0.05	0.051	0.0365415	0.0348	0.0407	0.0231	0.0643	0.0061	0.04	0.05	0.02	0.08	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.322659	NA	NA	NA	NA	NA	0.123	NA	3.9652
1255	12	15813449	15813449	C	T	intronic	EPS8	NA	NA	NA	intronic	ENSG00000151491	NA	NA	NA	NA	NA	12p12.3	NA	NA	NA	NA	rs146612691	0.02	0.02	0.014	0.014976	0.0348	NA	0.0115	0.003	0.0286	0.04	NA	0.01	0.0041	NA	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.623583	NA	NA	NA	NA	NA	0.029	NA	3.9652
1256	1	85279902	85279902	T	C	intronic	LPAR3	NA	NA	NA	intronic	ENSG00000171517	NA	NA	NA	NA	NA	1p22.3	NA	NA	NA	NA	rs41289035	0.01	0.01	0.005	0.00599042	0.0159	NA	0.0144	0.0023	0.001	0.01	NA	0.01	0.002	0.0074	0.012	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.860028	NA	NA	0.011763	0.002273	NA	0.007	NA	3.964937
1256	4	48546796	48546796	A	G	intronic	FRYL	NA	NA	NA	intronic	ENSG00000075539	NA	NA	NA	NA	NA	4p11	NA	NA	NA	NA	rs78799039	0.01	0.01	0.009	0.00539137	0.0139	NA	0.0101	0.0038	0.001	0.02	NA	0.01	NA	0.009	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.504442	NA	NA	0.012417	0.001939	NA	0.007	NA	3.964683
1256	3	58384995	58384995	G	A	intronic	PXK	NA	NA	NA	intronic	ENSG00000168297	NA	NA	NA	Score=676;Name=lod=747	NA	3p14.3	NA	NA	NA	NA	rs11712213	0.23	0.23	0.233	0.204273	0.3777	0.001	0.2839	0.2095	0.1718	0.36	NA	0.3	0.25	0.2844	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.037089	4.037089	NA	0.373256	0.214934	NA	0.319	NA	3.964644
1256	3	12641349	12641349	A	G	intronic	RAF1	NA	NA	NA	intronic	ENSG00000132155	NA	NA	NA	NA	NA	3p25.2	NA	NA	NA	NA	rs5746226	0.0041	0.0041	0.002	0.00459265	0.0089	NA	0.0101	NA	0.0072	0.004	NA	0.02	NA	0.011	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.350544	NA	NA	0.015465	0.002497	NA	NA	NA	3.964635
1256	3	12641350	12641350	A	G	intronic	RAF1	NA	NA	NA	intronic	ENSG00000132155	NA	NA	NA	NA	NA	3p25.2	NA	NA	NA	NA	rs5746225	0.0041	0.0041	0.002	0.00459265	0.0089	NA	0.0101	NA	0.0072	0.004	NA	0.02	NA	0.011	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.013409	NA	NA	0.015581	0.002497	NA	NA	NA	3.964519
1256	7	31378933	31378933	A	G	intronic	NEUROD6	NA	NA	NA	intronic	ENSG00000164600	NA	NA	NA	Score=711;Name=lod=1033	NA	7p14.3	NA	NA	NA	NA	rs2233404	0.27	0.27	0.254	0.259984	0.3449	0.3046	0.3429	0.1135	0.2658	0.34	0.24	0.35	0.14	0.3224	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.962483	1.962483	NA	0.368206	0.152562	NA	0.283	NA	3.964494
1256	9	100971348	100971348	T	C	exonic	TBC1D2	NA	synonymous SNV	TBC1D2:NM_001267572:exon3:c.A372G:p.A124A,TBC1D2:NM_001267571:exon9:c.A1752G:p.A584A,TBC1D2:NM_018421:exon9:c.A1752G:p.A584A	exonic	ENSG00000095383	NA	synonymous SNV	ENSG00000095383:ENST00000375063:exon3:c.A372G:p.A124A,ENSG00000095383:ENST00000342112:exon8:c.A1098G:p.A366A,ENSG00000095383:ENST00000375064:exon9:c.A1752G:p.A584A,ENSG00000095383:ENST00000375066:exon9:c.A1752G:p.A584A	NA	NA	9q22.33	NA	NA	NA	NA	rs3739666	0.6	0.6	0.615	0.599441	0.5706	0.498	0.5418	0.7731	0.5399	0.57	0.54	0.57	0.76	0.5711	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.713008	NA	NA	0.560479	0.745801	ID=COSM1458848;OCCURENCE=1(large_intestine)	0.522	NA	3.9644876
1256	7	75692927	75692927	C	T	intronic	MDH2	NA	NA	NA	intronic	ENSG00000146701	NA	NA	NA	NA	NA	7q11.23	NA	NA	Name=23	NA	rs1637037	0.53	0.53	0.535	0.547923	0.327	0.6071	0.4135	0.8064	0.4601	0.33	0.62	0.4	0.81	0.4059	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.166971	NA	NA	0.302674	0.708579	NA	0.63	NA	3.964426
1256	1	19403173	19403173	C	T	intronic	UBR4	NA	NA	NA	intronic	ENSG00000127481	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs137978878	0.01	0.01	0.01	0.0225639	0.0358	NA	0.0317	0.0008	0.0552	0.03	NA	0.04	NA	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.127152	NA	NA	NA	NA	NA	NA	NA	3.9642
1256	1	86870208	86870208	T	C	intergenic	ODF2L,CLCA2	dist=8183;dist=19561	NA	NA	ncRNA_exonic	ENSG00000231349	NA	NA	NA	NA	NA	1p22.3	NA	NA	NA	NA	rs116813580	0.02	0.02	0.011	0.0117812	0.0358	NA	0.013	0.0053	0.0072	0.04	NA	0.02	0.01	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.329113	NA	NA	NA	NA	NA	0.007	NA	3.9642
1256	1	89319082	89319082	C	T	intronic	GTF2B	NA	NA	NA	intronic	ENSG00000137947	NA	NA	NA	NA	NA	1p22.2	NA	NA	NA	NA	rs60992421	0.09	0.09	0.092	0.105431	0.0358	NA	0.0346	0.3442	0.0133	0.04	NA	0.04	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.155039	NA	NA	NA	NA	NA	0.196	NA	3.9642
1256	2	56977912	56977912	T	G	intergenic	CCDC85A,VRK2	dist=364603;dist=1295865	NA	NA	downstream	ENSG00000231570	NA	NA	NA	Score=374;Name=lod=44	NA	2p16.1	NA	NA	NA	NA	rs977375	0.45	0.45	0.446	0.399361	0.5358	0.5546	0.3069	0.1982	0.4366	0.56	0.54	0.38	0.21	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.498021	NA	NA	NA	NA	NA	0.543	NA	3.9642
1256	3	10042300	10042300	A	G	intergenic	EMC3,LOC401052	dist=13778;dist=5802	NA	NA	ncRNA_intronic	ENSG00000180385	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs143953816	0.02	0.02	0.015	0.0177716	0.0358	NA	0.0461	0.0008	0.0204	0.04	NA	0.03	NA	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.285044	2.285044	NA	NA	NA	NA	0.007	NA	3.9642
1256	3	14223224	14223224	C	T	intronic	LSM3	NA	NA	NA	intronic	ENSG00000170860	NA	NA	NA	NA	NA	3p25.1	NA	NA	NA	NA	rs3733170	0.13	0.13	0.122	0.140974	0.0358	0.4107	0.1138	0.0484	0.1155	0.04	0.36	0.1	0.03	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.359122	NA	NA	NA	NA	NA	0.043	NA	3.9642
1256	9	119770621	119770621	A	G	intronic	ASTN2	NA	NA	NA	intronic	ENSG00000148219	NA	NA	NA	NA	NA	9q33.1	NA	NA	NA	NA	rs16934199	0.03	0.03	0.026	0.0351438	0.0358	NA	0.0173	0.0764	0.0276	0.03	NA	0.02	0.07	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.429935	NA	NA	NA	NA	NA	0.022	NA	3.9642
1256	12	48188898	48188898	C	T	intronic	HDAC7	NA	NA	NA	intronic	ENSG00000061273	NA	NA	NA	NA	NA	12q13.11	NA	NA	NA	NA	rs17122311	0.09	0.09	0.041	0.106629	0.0358	0.0883	0.3184	0.0053	0.1851	0.04	0.1	0.25	0.01	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.821713	NA	NA	NA	NA	NA	0.08	NA	3.9642
1256	12	58157281	58157281	T	G	intronic	CYP27B1	NA	NA	NA	intronic	ENSG00000111012	NA	NA	NA	NA	NA	12q14.1	NA	NA	NA	NA	rs4646537	0.04	0.04	0.033	0.0445288	0.0358	0.0238	0.0274	0.0877	0.0286	0.04	0.02	0.03	0.07	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.848882	NA	NA	NA	NA	NA	0.014	NA	3.9642
1256	12	58163265	58163265	C	T	intronic	METTL1	NA	NA	NA	intronic	ENSG00000037897	NA	NA	NA	NA	NA	12q14.1	NA	NA	NA	NA	rs77194942	0.04	0.04	0.033	0.0433307	0.0358	0.0198	0.0274	0.087	0.0276	0.04	0.02	0.03	0.07	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.70006	NA	NA	NA	NA	NA	0.014	NA	3.9642
1256	19	19767747	19767747	G	C	intronic	ATP13A1	NA	NA	NA	intronic	ENSG00000105726	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs45501395	0.01	0.01	0.009	0.00599042	0.0129	NA	0.0115	NA	0.0092	0.02	NA	0.02	NA	0.0111	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.750394	2.750394	NA	0.011988	0.003409	NA	NA	NA	3.964012
1256	8	6728198	6728198	C	T	UTR3	DEFB1	NM_005218:c.*5G>A	NA	NA	ncRNA_UTR3	ENSG00000164825	NA	NA	NA	NA	NA	8p23.1	NA	NA	NA	NA	rs1047031	0.21	0.21	0.166	0.196486	0.167	0.4117	0.255	0.0106	0.2147	0.19	0.38	0.23	0.02	0.1994	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.447167	NA	NA	0.169651	0.037676	ID=COSN168266;OCCURENCE=1(large_intestine),1(endometrium)	0.116	NA	3.963949
1256	19	35616016	35616016	G	A	UTR3	LGI4	NM_139284:c.*81C>T	NA	NA	UTR3	ENSG00000153902	ENST00000392225:c.*287C>T,ENST00000310123:c.*81C>T,ENST00000587780:c.*1056C>T	NA	NA	NA	NA	19q13.12	NA	NA	NA	NA	rs1048690	0.3	0.3	0.302	0.342252	0.3698	0.253	0.2493	0.2935	0.5378	0.38	0.23	0.23	0.32	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.642902	NA	NA	NA	NA	NA	0.362	NA	3.9635334
1256	22	23077555	23077555	T	C	intergenic	GGTLC2,MIR650	dist=87187;dist=87715	NA	NA	exonic	ENSG00000211664	NA	nonsynonymous SNV	ENSG00000211664:ENST00000390310:exon2:c.T332C:p.L111S	NA	NA	22q11.22	NA	Name=PU.1	NA	NA	rs4822296	0.77	0.77	0.777	0.792133	0.6153	0.9157	0.7579	0.8956	0.7311	0.6	0.92	0.74	0.88	0.6694	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.082509	NA	1	0.585158	0.857333	NA	0.688	NA	3.9634754
1256	9	37428578	37428578	C	T	intronic	GRHPR	NA	NA	NA	intronic	ENSG00000137106	NA	NA	NA	NA	NA	9p13.2	NA	NA	NA	NA	rs41303225	0.01	0.01	0.006	0.00499201	0.0119	0.001	0.0086	NA	0.0061	0.01	0.0017	0.0028	NA	0.0099	0.015	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.93404	NA	NA	0.014884	0.002497	NA	0.007	NA	3.963316
1256	19	42489516	42489516	A	C	exonic	ATP1A3	NA	synonymous SNV	ATP1A3:NM_001256213:exon7:c.T699G:p.T233T,ATP1A3:NM_001256214:exon7:c.T705G:p.T235T,ATP1A3:NM_152296:exon7:c.T666G:p.T222T	exonic	ENSG00000105409	NA	synonymous SNV	ENSG00000105409:ENST00000302102:exon7:c.T666G:p.T222T,ENSG00000105409:ENST00000441343:exon7:c.T666G:p.T222T,ENSG00000105409:ENST00000543770:exon7:c.T699G:p.T233T,ENSG00000105409:ENST00000545399:exon7:c.T705G:p.T235T,ENSG00000105409:ENST00000602133:exon7:c.T576G:p.T192T	NA	NA	19q13.2	Score=832;Name=V$AHRARNT_01	NA	NA	NA	rs2217342	0.91	0.91	0.913	0.901558	0.9125	0.876	0.889	0.9955	0.7986	0.92	0.88	0.86	0.99	0.8894	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.228711	NA	NA	0.901512	0.984793	NA	0.935	NA	3.9632546
1256	2	231314190	231314190	A	G	intronic	SP100	NA	NA	NA	intronic	ENSG00000067066	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs75804297	0.02	0.02	0.017	0.0141773	0.0368	NA	0.0317	0.0015	0.0102	0.04	NA	0.04	0.002	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.148102	NA	NA	NA	NA	NA	0.051	NA	3.9632
1256	4	102004154	102004154	C	T	intronic	PPP3CA	NA	NA	NA	intronic	ENSG00000138814	NA	NA	NA	NA	NA	4q24	NA	NA	NA	NA	rs111377582	0.02	0.02	0.02	0.0225639	0.0368	NA	0.0331	0.0023	0.0511	0.03	NA	0.04	0.01	NA	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.306082	NA	NA	NA	NA	NA	0.043	NA	3.9632
1256	7	138329658	138329658	G	A	intronic	SVOPL	NA	NA	NA	intronic	ENSG00000157703	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs28367131	0.16	0.16	0.175	0.196885	0.0368	0.1944	0.1066	0.3775	0.184	0.04	0.21	0.08	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.082829	NA	NA	NA	NA	NA	0.246	NA	3.9632
1256	11	8974942	8974942	G	C	intronic	TMEM9B	NA	NA	NA	intronic	ENSG00000175348	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs117002418	0.02	0.02	0.016	0.0133786	0.0368	NA	0.0173	0.0008	0.0174	0.03	NA	0.02	0.002	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.96646	NA	NA	NA	NA	NA	NA	NA	3.9632
1256	20	31767508	31767508	A	G	intronic	BPIFA2	NA	NA	NA	intronic	ENSG00000131050	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs1075436	0.09	0.09	0.093	0.103435	0.004	0.0317	0.0317	0.348	NA	0.01	0.03	0.04	0.33	0.0311	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.11562	NA	NA	0.001977	0.284612	NA	0.094	NA	3.962923
1256	21	43716241	43716241	A	G	intronic	ABCG1	NA	NA	NA	intronic	ENSG00000160179	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs11910928	0.09	0.09	0.1	0.120407	0.001	NA	0.0389	0.4334	0.002	0.0013	NA	0.04	0.39	0.0348	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.410761	NA	NA	0.001279	0.352474	NA	0.138	NA	3.962921
1256	14	23865885	23865885	G	A	intronic	MYH6	NA	NA	NA	intronic	ENSG00000197616	NA	NA	NA	NA	Name=Resting heart rate	14q11.2	NA	NA	NA	NA	rs452036	0.35	0.35	0.369	0.367812	0.336	0.1577	0.2839	0.6362	0.3139	0.33	0.15	0.33	0.63	0.3384	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.242279	NA	NA	0.362791	0.608715	NA	0.391	NA	3.962809
1256	20	48744742	48744742	G	C	intronic	TMEM189,TMEM189-UBE2V1	NA	NA	NA	intronic	ENSG00000124208,ENSG00000240849	NA	NA	NA	NA	NA	20q13.13	NA	NA	NA	NA	rs138028944	NA	NA	NA	0.00259585	0.0089	NA	0.0043	NA	0.001	NA	NA	NA	NA	0.0132	0.015	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.976657	NA	NA	0.015116	0.003631	NA	NA	NA	3.962784
1256	17	10356816	10356816	C	G	intronic	MYH4	NA	NA	NA	ncRNA_intronic	ENSG00000214970	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs3744557	0.52	0.52	0.486	0.533347	0.3708	0.8621	0.5187	0.3442	0.6278	0.38	0.87	0.5	0.33	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.163134	NA	NA	NA	NA	NA	0.601	NA	3.9625333
1256	2	44559529	44559529	C	T	intronic	PREPL	NA	NA	NA	intronic	ENSG00000138078	NA	NA	NA	NA	NA	2p21	NA	NA	NA	NA	rs151295692	0.02	0.02	0.014	0.0115815	0.0378	0.001	0.013	0.0023	0.0072	0.03	0.0017	0.02	0.0041	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.121216	NA	NA	NA	NA	NA	0.014	NA	3.9622
1256	3	48456870	48456870	T	G	intronic	PLXNB1	NA	NA	NA	intronic	ENSG00000164050	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs115869055	0.02	0.02	0.014	0.0101837	0.0378	NA	0.0173	NA	0.001	0.04	NA	0.02	NA	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.525341	NA	NA	NA	NA	NA	0.036	NA	3.9622
1256	8	119938635	119938635	G	A	intronic	TNFRSF11B	NA	NA	NA	intronic	ENSG00000164761	NA	NA	NA	NA	NA	8q24.12	NA	NA	NA	NA	rs11573931	0.02	0.02	0.017	0.0119808	0.0378	NA	0.0231	0.0015	0.0041	0.04	NA	0.03	NA	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.061473	NA	NA	NA	NA	NA	NA	NA	3.9622
1256	11	68846578	68846578	G	A	intronic	TPCN2	NA	NA	NA	intronic	ENSG00000162341	NA	NA	NA	NA	NA	11q13.3	NA	NA	NA	NA	rs74685061	0.01	0.01	0.013	0.0103834	0.0378	NA	0.0159	0.0015	0.001	0.03	NA	0.02	0.0041	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.059535	NA	NA	NA	NA	NA	NA	NA	3.9622
1256	14	20823212	20823212	A	G	intronic	PARP2	NA	NA	NA	intronic	ENSG00000129484	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs1760914	0.13	0.13	0.141	0.159345	0.0378	0.1944	0.1311	0.2474	0.1493	0.03	0.17	0.11	0.23	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.770061	NA	NA	NA	NA	NA	0.072	NA	3.9622
1256	19	6679578	6679578	G	A	intronic	C3	NA	NA	NA	intronic	ENSG00000125730	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs11569560	0.03	0.03	0.018	0.0267572	0.0378	0.006	0.0202	0.0151	0.0573	0.04	0.01	0.02	0.03	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.39432	2.39432	NA	NA	NA	NA	0.029	NA	3.9622
1256	20	25027587	25027587	G	C	intronic	ACSS1	NA	NA	NA	intronic	ENSG00000154930	NA	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	rs45574242	NA	NA	0.096	0.0804712	0.0378	0.2302	0.0591	0.0378	0.0429	NA	NA	NA	NA	NA	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.966502	1.966502	NA	NA	NA	NA	0.029	NA	3.9622
1256	20	30507554	30507554	G	T	intronic	TTLL9	NA	NA	NA	intronic	ENSG00000131044	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs74399667	0.06	0.06	0.051	0.0654952	0.0378	NA	0.0476	0.171	0.0317	0.04	NA	0.07	0.16	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.113424	NA	NA	NA	NA	NA	0.051	NA	3.9622
1256	7	23358880	23358880	G	T	intronic	IGF2BP3	NA	NA	NA	intronic	ENSG00000136231	NA	NA	NA	NA	NA	7p15.3	NA	NA	NA	NA	rs117151817	0.01	0.01	0.007	0.00638978	0.0119	NA	0.0216	0.0008	0.0041	0.01	NA	0.01	NA	0.0093	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.074558	NA	NA	0.01686	0.003858	NA	0.014	NA	3.96194
1256	9	5720172	5720172	C	G	intronic	KIAA1432	NA	NA	NA	ncRNA_intronic	ENSG00000225408	NA	NA	NA	NA	NA	9p24.1	NA	NA	Name=7	NA	rs10758700	0.51	0.51	0.463	0.495208	0.4344	0.8591	0.4856	0.1815	0.6135	0.46	0.87	0.5	0.17	0.4956	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.750361	NA	NA	0.441395	0.216977	NA	0.435	NA	3.9619383
1256	10	114169190	114169190	C	A	intronic	ACSL5	NA	NA	NA	ncRNA_exonic	ENSG00000232934	NA	NA	NA	NA	NA	10q25.2	NA	NA	NA	NA	rs3736947	0.35	0.35	0.299	0.34385	0.3718	0.5605	0.4424	0.0242	0.454	0.38	0.54	0.42	0.03	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.030316	NA	NA	NA	NA	NA	0.355	NA	3.9615333
1256	14	22315212	22315212	A	G	intergenic	OR4E2,DAD1	dist=180974;dist=718595	NA	NA	exonic	ENSG00000211786	NA	synonymous SNV	ENSG00000211786:ENST00000390434:exon2:c.A150G:p.P50P	NA	NA	14q11.2	NA	NA	NA	NA	rs2075488	0.3	0.3	0.281	0.329872	0.1491	0.5298	0.255	0.3321	0.3599	0.15	0.51	0.23	0.35	0.2394	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.068055	NA	NA	0.150107	0.283932	NA	0.225	NA	3.961393
1256	16	75270721	75270721	C	A	intronic	BCAR1	NA	NA	NA	intronic	ENSG00000050820	NA	NA	NA	NA	NA	16q23.1	Score=858;Name=V$AHRARNT_01	NA	NA	NA	rs2278020	0.52	0.52	0.506	0.539337	0.3141	0.8433	0.3919	0.5582	0.5368	0.32	0.83	0.41	0.54	0.4169	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.338642	NA	NA	0.307668	0.524566	NA	0.514	NA	3.961332
1256	1	152944594	152944594	C	T	exonic	SPRR4	NA	synonymous SNV	SPRR4:NM_173080:exon2:c.C228T:p.S76S	exonic	ENSG00000184148	NA	synonymous SNV	ENSG00000184148:ENST00000328051:exon2:c.C228T:p.S76S	NA	NA	1q21.3	NA	NA	NA	NA	rs3170863	0.64	0.64	0.681	0.6252	0.5656	0.6319	0.4986	0.8306	0.4918	0.56	0.66	0.55	0.81	0.5686	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.546088	NA	NA	0.571163	0.777349	NA	0.594	NA	3.9613036
1256	3	118945614	118945614	G	A	intronic	B4GALT4	NA	NA	NA	ncRNA_intronic	ENSG00000240254	NA	NA	NA	NA	NA	3q13.32	NA	NA	NA	NA	rs3752376	0.12	0.12	0.115	0.119409	0.1064	0.256	0.0749	0.0454	0.1237	0.1	0.25	0.07	0.04	0.1313	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.823441	NA	NA	0.134419	0.060372	NA	0.094	NA	3.9612143
1256	3	112760287	112760287	A	T	intergenic	C3orf17,BOC	dist=21732;dist=171088	NA	NA	ncRNA_exonic	ENSG00000243483	NA	NA	NA	NA	NA	3q13.2	NA	NA	NA	NA	rs13324321	0.02	0.02	0.014	0.0131789	0.0388	NA	0.0288	0.0023	0.0041	0.04	NA	0.04	0.0041	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.908587	NA	NA	NA	NA	NA	0.072	NA	3.9612
1256	15	89503335	89503335	C	G	intergenic	MFGE8,ABHD2	dist=46672;dist=128046	NA	NA	ncRNA_exonic	ENSG00000259489	NA	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs16942530	0.08	0.08	0.069	0.0722843	0.0388	0.1637	0.1455	0.028	0.0204	0.04	0.17	0.11	0.03	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.788849	NA	NA	NA	NA	NA	0.051	NA	3.9612
1256	3	48205625	48205625	T	C	intronic	CDC25A	NA	NA	NA	intronic	ENSG00000164045	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs41290676	0.02	0.02	0.016	0.0119808	0.0388	NA	0.0173	0.0045	0.0031	0.03	NA	0.03	0.01	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.566338	NA	NA	NA	NA	NA	0.014	NA	3.9612
1256	6	151694504	151694504	A	G	intronic	ZBTB2	NA	NA	NA	intronic	ENSG00000181472	NA	NA	NA	NA	NA	6q25.1	NA	NA	NA	NA	rs9479023	0.13	0.13	0.149	0.123203	0.0388	0.1667	0.0346	0.2519	0.0542	0.04	0.16	0.05	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.16217	NA	NA	NA	NA	NA	0.094	NA	3.9612
1256	8	145625953	145625953	C	T	intronic	CPSF1	NA	NA	NA	intronic	ENSG00000071894	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs145477989	0.01	0.01	0.006	0.0135783	0.0388	NA	0.0086	NA	0.0235	0.04	NA	0.01	NA	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.320265	NA	NA	NA	NA	NA	0.022	NA	3.9612
1256	12	69109344	69109344	G	T	intronic	NUP107	NA	NA	NA	intronic	ENSG00000111581	NA	NA	NA	NA	NA	12q15	NA	NA	NA	NA	rs74332187	0.02	0.02	0.013	0.0171725	0.0388	NA	0.0274	0.0008	0.0276	0.04	NA	0.03	NA	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.649842	NA	NA	NA	NA	NA	0.007	NA	3.9612
1256	18	63489243	63489243	C	T	intronic	CDH7	NA	NA	NA	intronic	ENSG00000081138	NA	NA	NA	NA	NA	18q22.1	NA	NA	NA	NA	rs28722899	0.08	0.08	0.081	0.114217	0.0388	0.0169	0.085	0.2345	0.1503	0.04	0.01	0.06	0.24	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.679029	NA	NA	NA	NA	NA	0.058	NA	3.9612
1256	11	1213177	1213177	C	T	intergenic	MUC2,MUC5B	dist=108760;dist=31118	NA	NA	intergenic	ENSG00000215182,ENSG00000117983	dist=50816;dist=31119	NA	NA	NA	NA	11p15.5	NA	NA	Name=35	NA	rs74046246	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3723	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.176238	NA	NA	NA	NA	NA	0.022	NA	3.9610334
1256	1	229599439	229599439	A	C	intronic	NUP133	NA	NA	NA	intronic	ENSG00000069248	NA	NA	NA	NA	NA	1q42.13	NA	NA	NA	NA	rs16849788	0.06	0.06	0.065	0.0770767	0.006	0.003	0.0259	0.2625	0.0123	0.0013	NA	0.03	0.22	0.0278	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.672309	1.672309	NA	0.005233	0.217658	NA	0.072	NA	3.960967
1256	16	107162	107162	C	G	UTR3	SNRNP25	NM_024571:c.*19C>G	NA	NA	UTR3	ENSG00000161981	ENST00000293861:c.*19C>G,ENST00000383018:c.*19C>G,ENST00000397876:c.*212C>G	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs10266	0.12	0.12	0.133	0.138379	0.1243	NA	0.1182	0.3154	0.0706	0.12	NA	0.1	0.27	0.1196	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.491198	NA	NA	0.128488	0.283704	NA	0.145	NA	3.9609454
1256	16	56701798	56701798	G	C	intronic	MT1G	NA	NA	NA	intronic	ENSG00000125144	NA	NA	NA	NA	NA	16q13	NA	NA	NA	NA	rs72784737	0.01	0.01	0.008	0.00658946	0.0199	NA	0.0058	NA	0.0092	0.02	NA	0.01	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.295425	NA	NA	0.01917	0.001445	NA	0.051	NA	3.96093
1256	16	4562707	4562707	C	T	intronic	CDIP1	NA	NA	NA	intronic	ENSG00000089486	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs117229454	0.01	0.01	0.006	0.00678914	0.0159	NA	0.0202	NA	0.0041	0.02	NA	0.01	0.002	0.0118	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.008374	NA	NA	0.011401	0.000701	NA	0.007	NA	3.960899
1256	12	58017701	58017701	T	G	intronic	SLC26A10	NA	NA	NA	intronic	ENSG00000135502	NA	NA	NA	NA	NA	12q13.3	NA	Name=Pol2	NA	NA	rs7314152	0.44	0.44	0.414	0.466853	0.3181	0.5883	0.3674	0.4342	0.6094	0.34	0.65	0.34	0.45	0.4068	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.350519	1.350519	NA	0.314302	0.42828	NA	0.428	NA	3.960798
1256	17	55189986	55189986	G	C	intronic	AKAP1	NA	NA	NA	intronic	ENSG00000121057	NA	NA	NA	NA	NA	17q22	NA	NA	NA	NA	rs61751973	0.01	0.01	0.008	0.00958466	0.0189	NA	0.0086	NA	0.0235	0.02	NA	0.01	NA	0.0114	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.309006	NA	NA	0.00907	0.002043	NA	0.014	NA	3.96063
1256	16	23768481	23768481	C	T	intronic	CHP2	NA	NA	NA	intronic	ENSG00000166869	NA	NA	NA	NA	NA	16p12.2	NA	NA	NA	NA	rs118109714	0.01	0.01	0.006	0.00579073	0.0159	NA	0.0058	NA	0.0092	0.01	NA	0.01	NA	0.01	0.013	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.450473	NA	NA	0.013488	0.002276	NA	NA	NA	3.960612
1256	2	183818091	183818091	C	T	intronic	NCKAP1	NA	NA	NA	intronic	ENSG00000061676	NA	NA	NA	NA	NA	2q32.1	NA	NA	NA	NA	rs72886576	0.0046	0.0046	0.004	0.00379393	0.0129	0.001	0.0058	NA	0.001	0.01	0.0017	0.01	NA	0.0097	0.017	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.184512	NA	NA	0.01686	0.004312	NA	0.007	NA	3.96054
1256	9	91978932	91978932	G	T	intronic	SEMA4D	NA	NA	NA	UTR5	ENSG00000187764	ENST00000420101:c.-30C>A	NA	NA	NA	NA	9q22.2	NA	NA	NA	NA	rs45544232	0.03	0.03	0.033	0.0367412	0.0706	NA	0.0346	0.003	0.0869	0.07	NA	0.04	0.01	0.0646	0.071	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.226794	NA	NA	0.071163	0.013845	NA	0.036	NA	3.9603037
1256	13	42144590	42144590	C	G	intronic	VWA8	NA	NA	NA	intronic	ENSG00000102763	NA	NA	NA	NA	NA	13q14.11	NA	NA	NA	NA	rs9566792	0.05	0.05	0.045	0.0449281	0.007	0.1161	0.0058	0.0522	0.0286	0.01	0.11	0.01	0.07	0.0228	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.51274	1.51274	NA	0.009911	0.032715	NA	0.014	NA	3.960289
1256	1	32156722	32156722	G	A	intronic	COL16A1	NA	NA	NA	intronic	ENSG00000084636	NA	NA	NA	NA	NA	1p35.2	NA	Name=GR	NA	NA	rs10914467	0.32	0.32	0.329	0.290935	0.5328	0.124	0.2824	0.2587	0.2638	0.52	0.09	0.35	0.26	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.639563	NA	NA	0.506914	0.277457	NA	0.333	NA	3.960286
1256	1	20469854	20469854	G	A	intronic	PLA2G2F	NA	NA	NA	intronic	ENSG00000158786	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs12745152	0.02	0.02	0.009	0.0113818	0.0398	NA	0.0086	0.0015	0.0092	0.04	NA	0.01	0.0041	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.121415	NA	NA	NA	NA	NA	NA	NA	3.9602
1256	1	43213285	43213285	C	T	intronic	LEPRE1	NA	NA	NA	intronic	ENSG00000117385	NA	NA	NA	NA	NA	1p34.2	NA	NA	NA	NA	rs72661349	0.05	0.05	0.05	0.0551118	0.0398	0.001	0.0389	0.1127	0.0603	0.04	NA	0.05	0.1	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.059494	NA	NA	NA	NA	NA	0.058	NA	3.9602
1256	4	38990336	38990336	T	C	intronic	TMEM156	NA	NA	NA	intronic	ENSG00000121895	NA	NA	NA	NA	NA	4p14	NA	NA	NA	NA	rs75089163	0.07	0.07	0.048	0.0832668	0.0398	0.0734	0.111	0.09	0.1094	0.04	0.06	0.12	0.09	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.17406	NA	NA	NA	NA	NA	0.065	NA	3.9602
1256	16	19651251	19651251	T	G	intronic	C16orf62	NA	NA	NA	intronic	ENSG00000103544	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs12935562	0.07	0.07	0.077	0.0756789	0.0398	0.0119	0.0764	0.1664	0.0552	0.03	0.02	0.07	0.19	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.073904	NA	NA	NA	NA	NA	0.116	NA	3.9602
1256	19	5749070	5749070	C	T	intronic	CATSPERD	NA	NA	NA	intronic	ENSG00000174898	NA	NA	NA	NA	NA	19p13.3	NA	NA	Name=12	NA	rs58136456	0.41	0.41	0.404	0.364217	0.3539	0.6647	0.4352	0.1657	0.2832	0.34	0.7	0.44	0.16	0.3603	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.138661	NA	NA	0.325678	0.174369	NA	0.362	NA	3.960122
1256	8	41580607	41580607	T	C	intronic	ANK1	NA	NA	NA	intronic	ENSG00000029534	NA	NA	NA	NA	NA	8p11.21	NA	NA	Name=8	NA	rs7826127	0.35	0.35	0.363	0.367612	0.3519	0.2589	0.2939	0.5477	0.3047	0.35	0.24	0.3	0.52	0.3375	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.796685	NA	NA	0.350581	0.491829	ID=COSN168325;OCCURENCE=1(large_intestine)	0.391	NA	3.960019
1256	1	224586334	224586334	A	G	intronic	WDR26	NA	NA	NA	intronic	ENSG00000162923	NA	NA	NA	NA	NA	1q42.11	NA	NA	NA	NA	rs73125526	0.08	0.08	0.08	0.0952476	0.005	NA	0.0432	0.3336	0.001	0.0013	NA	0.04	0.34	0.0307	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.262976	2.262976	NA	0.004317	0.288444	NA	0.145	NA	3.959983
1256	2	85852859	85852859	A	G	intronic	USP39	NA	NA	NA	intronic	ENSG00000168883	NA	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs115784820	0.01	0.01	0.004	0.00519169	0.0109	NA	0.0144	0.0015	0.0031	0.01	NA	0.01	0.0041	0.0126	0.017	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.145962	NA	NA	0.016628	0.003177	NA	NA	NA	3.959872
1256	22	49103499	49103499	C	T	intronic	FAM19A5	NA	NA	NA	intronic	ENSG00000219438	NA	NA	NA	NA	NA	22q13.32	NA	NA	NA	NA	rs76309472	0.08	0.08	0.097	0.0920527	0.007	0.0774	0.013	0.2587	0.0256	0.01	0.08	0.01	0.27	0.0306	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.733271	NA	NA	0.002599	0.197862	NA	0.087	NA	3.959801
1256	1	17720391	17720391	G	A	intronic	PADI6	NA	NA	NA	ncRNA_intronic	ENSG00000256049	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs6678552	0.31	0.31	0.291	0.318091	0.3738	0.1706	0.3646	0.3275	0.3671	0.39	0.17	0.37	0.33	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.556548	NA	NA	NA	NA	NA	0.304	NA	3.9595333
1256	5	140554006	140554006	C	G	exonic	PCDHB7	NA	synonymous SNV	PCDHB7:NM_018940:exon1:c.C1590G:p.R530R	exonic	ENSG00000113212	NA	synonymous SNV	ENSG00000113212:ENST00000231137:exon1:c.C1590G:p.R530R	NA	NA	5q31.3	NA	NA	NA	NA	rs2907329	0.61	0.61	0.61	0.631589	0.5477	0.6716	0.6527	0.6884	0.5849	0.54	0.66	0.6	0.66	0.5957	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.338608	NA	NA	0.563837	0.65547	NA	0.312	NA	3.9594296
1256	4	99397658	99397658	A	G	intronic	TSPAN5	NA	NA	NA	intronic	ENSG00000168785	NA	NA	NA	NA	NA	4q23	NA	NA	NA	NA	rs17027617	0.05	0.05	0.049	0.0567093	0.007	NA	0.0245	0.1838	0.0174	0.01	NA	0.03	0.17	0.0232	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.873806	NA	NA	0.010581	0.14571	NA	0.043	NA	3.959219
1256	1	38080065	38080065	C	A	intronic	RSPO1	NA	NA	NA	intronic	ENSG00000169218	NA	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	rs11588571	0.02	0.02	0.017	0.0205671	0.0408	0.0129	0.0173	0.0023	0.0348	0.04	0.01	0.02	0.0041	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.109139	NA	NA	NA	NA	NA	0.014	NA	3.9592
1256	6	52303048	52303048	G	T	intronic	EFHC1	NA	NA	NA	intronic	ENSG00000096093	NA	NA	NA	NA	NA	6p12.2	NA	NA	NA	NA	rs539295	0.07	0.07	0.079	0.0722843	0.0408	NA	0.0317	0.2194	0.0092	0.04	NA	0.03	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.510028	NA	NA	NA	NA	NA	0.145	NA	3.9592
1256	7	156516956	156516956	T	C	intronic	LMBR1	NA	NA	NA	intronic	ENSG00000105983	NA	NA	NA	NA	NA	7q36.3	NA	NA	NA	NA	rs10949601	0.02	0.02	0.01	0.0205671	0.0408	0.002	0.0591	0.0045	0.0133	0.04	0.0017	0.06	0.002	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.063708	NA	NA	NA	NA	NA	0.051	NA	3.9592
1256	9	131554705	131554705	C	T	intronic	TBC1D13	NA	NA	NA	intronic	ENSG00000107021	NA	NA	NA	NA	NA	9q34.11	NA	NA	NA	NA	rs3750322	0.04	0.04	0.03	0.0391374	0.0408	0.0526	0.0303	0.0378	0.0317	0.04	0.06	0.04	0.03	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.304955	NA	NA	NA	NA	NA	0.058	NA	3.9592
1256	9	133505888	133505888	T	C	intronic	FUBP3	NA	NA	NA	intronic	ENSG00000107164	NA	NA	NA	NA	NA	9q34.12	NA	NA	NA	NA	rs11791722	0.03	0.03	0.02	0.0203674	0.0408	0.0258	0.0274	0.003	0.0123	0.04	0.03	0.03	0.01	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.365111	NA	NA	NA	NA	NA	0.007	NA	3.9592
1256	11	108124486	108124486	T	G	intronic	ATM	NA	NA	NA	intronic	ENSG00000149311	NA	NA	NA	NA	NA	11q22.3	NA	NA	NA	NA	rs4987951	0.02	0.02	0.009	0.0147764	0.0408	0.002	0.0187	NA	0.0184	0.04	0.0035	0.03	NA	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.419524	NA	NA	NA	NA	NA	NA	NA	3.9592
1256	22	32754500	32754500	C	G	intronic	RFPL3	NA	NA	NA	intronic	ENSG00000128276	NA	NA	NA	NA	NA	22q12.3	NA	NA	NA	NA	rs5754006	0.16	0.16	0.109	0.144569	0.0408	0.4583	0.0893	0.0265	0.1268	0.04	0.46	0.1	0.02	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.777603	NA	NA	NA	NA	NA	0.08	NA	3.9592
1256	22	32754561	32754561	C	G	intronic	RFPL3	NA	NA	NA	intronic	ENSG00000128276	NA	NA	NA	NA	NA	22q12.3	NA	NA	NA	NA	rs5754007	0.16	0.16	0.111	0.145767	0.0408	0.4583	0.0908	0.0303	0.1268	0.04	0.45	0.1	0.02	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.332861	NA	NA	NA	NA	NA	0.08	NA	3.9592
1256	4	68935672	68935672	G	T	ncRNA_intronic	LOC550113	NA	NA	NA	ncRNA_intronic	ENSG00000248049	NA	NA	NA	NA	NA	4q13.2	NA	NA	NA	NA	rs12504120	0.23	0.23	0.221	0.242612	0.2664	0.1349	0.4179	0.2163	0.2403	0.27	0.13	0.37	0.2	0.2393	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.573325	1.573325	NA	0.20186	0.189146	NA	0.167	NA	3.9591066
1256	10	104163569	104163569	G	A	intronic	PSD	NA	NA	NA	intronic	ENSG00000059915	NA	NA	NA	NA	NA	10q24.32	NA	Name=Pol2-4H8,ZNF263	NA	NA	rs11191283	0.25	0.25	0.208	0.261581	0.3569	0.1925	0.3487	0.0461	0.4642	0.34	0.2	0.36	0.07	0.3419	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.905954	NA	NA	0.342289	0.092601	NA	0.283	NA	3.958911
1256	15	75047426	75047426	C	T	exonic	CYP1A2	NA	synonymous SNV	CYP1A2:NM_000761:exon7:c.C1548T:p.N516N	exonic	ENSG00000140505	NA	synonymous SNV	ENSG00000140505:ENST00000343932:exon7:c.C1548T:p.N516N	NA	NA	15q24.1	NA	NA	NA	NA	rs2470890	0.32	0.32	0.296	0.236222	0.5964	0.1637	0.3271	0.028	0.1575	0.59	0.16	0.38	0.03	0.4574	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.287791	NA	NA	0.65398	0.124488	NA	0.391	NA	3.9588866
1256	1	197070815	197070815	T	C	exonic	ASPM	NA	synonymous SNV	ASPM:NM_018136:exon18:c.A7566G:p.L2522L	exonic	ENSG00000066279	NA	synonymous SNV	ENSG00000066279:ENST00000367409:exon18:c.A7566G:p.L2522L	NA	NA	1q31.3	NA	NA	NA	NA	rs1412640	0.85	0.85	0.819	0.815895	0.9125	1	0.8934	0.497	0.9029	0.92	1	0.91	0.53	0.8876	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.96108	NA	NA	0.907726	0.551294	NA	0.739	CLINSIG=non-pathogenic;CLNDBN=Primary_autosomal_recessive_microcephaly_5;CLNREVSTAT=single;CLNACC=RCV000020792.1;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet;CLNDSDBID=NBK9587:C1837501:608716:ORPHA2512	3.9588406
1256	9	33887010	33887010	T	A	intronic	UBE2R2	NA	NA	NA	intronic	ENSG00000107341	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs12553078	0.01	0.01	NA	0.0135783	0.0169	NA	0.0058	0.0015	0.046	0.01	NA	0.01	0.002	0.0205	0.01	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.001837	NA	NA	0.003841	0	NA	NA	NA	3.958759
1256	1	118492527	118492527	G	A	intronic	WDR3	NA	NA	NA	intronic	ENSG00000065183	NA	NA	NA	NA	NA	1p12	NA	NA	NA	NA	rs2295629	0.19	0.19	0.198	0.232827	0.0417	0.3839	0.0821	0.3457	0.228	0.03	0.36	0.06	0.35	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.743644	NA	NA	NA	NA	ID=COSN163200;OCCURENCE=1(breast)	0.152	NA	3.9583
1256	3	100057846	100057846	C	T	intronic	NIT2	NA	NA	NA	intronic	ENSG00000114021	NA	NA	NA	NA	NA	3q12.2	NA	NA	NA	NA	rs1214381	0.28	0.28	0.289	0.269768	0.0417	0.5179	0.2032	0.4289	0.0808	0.04	0.5	0.21	0.46	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.399074	NA	NA	NA	NA	NA	0.21	NA	3.9583
1256	3	100058102	100058102	G	A	intronic	NIT2	NA	NA	NA	intronic	ENSG00000114021	NA	NA	NA	NA	NA	3q12.2	NA	NA	NA	NA	rs166747	0.28	0.28	0.287	0.26857	0.0417	0.5179	0.2032	0.4259	0.0787	0.04	0.5	0.21	0.46	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.840892	2.840892	NA	NA	NA	NA	0.21	NA	3.9583
1256	4	1164132	1164132	C	G	intronic	SPON2	NA	NA	NA	intronic	ENSG00000159674	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs76966734	0.06	0.06	0.047	0.0537141	0.0417	0.1379	0.0317	0.0076	0.0573	0.05	0.12	0.04	0.01	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.679972	NA	NA	NA	NA	NA	0.007	NA	3.9583
1256	7	77091083	77091083	G	A	intergenic	GSAP,PTPN12	dist=45366;dist=75690	NA	NA	ncRNA_exonic	ENSG00000237620	NA	NA	NA	NA	NA	7q11.23	NA	NA	NA	NA	rs73364687	0.08	0.08	0.071	0.0750799	0.0417	0.0446	0.0764	0.1415	0.0501	0.05	0.06	0.08	0.14	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.683116	NA	NA	NA	NA	NA	0.072	NA	3.9583
1256	16	32616891	32616891	C	A	intergenic	LOC390705,TP53TG3	dist=315589;dist=67958	NA	NA	ncRNA_intronic	ENSG00000259966	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs28671370	NA	NA	0.38	0.0413339	0.0417	0.0685	0.0274	0.0454	0.0174	NA	NA	NA	NA	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.738307	NA	NA	NA	NA	NA	0.428	NA	3.9583
1256	19	51219057	51219057	G	A	intronic	SHANK1	NA	NA	NA	intronic	ENSG00000161681	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs10416207	0.1	0.1	0.119	0.111621	0.0417	NA	0.062	0.3449	0.0184	0.04	NA	0.07	0.34	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.368968	1.368968	NA	NA	NA	NA	0.174	NA	3.9583
1256	22	30771458	30771458	T	C	ncRNA_exonic	KIAA1656	NA	NA	NA	ncRNA_exonic	ENSG00000241528	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs1002189	0.18	0.18	0.182	0.154553	0.2545	0.1458	0.1585	0.1362	0.0828	0.24	0.12	0.16	0.14	0.1968	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.397015	NA	NA	0.257093	0.154562	NA	0.268	NA	3.9582736
1256	4	141563992	141563992	T	G	ncRNA_exonic	TNRC18P1	NA	NA	NA	ncRNA_exonic	ENSG00000249661	NA	NA	NA	NA	NA	4q31.21	NA	NA	NA	NA	rs6537003	0.8	0.8	0.798	0.804513	0.7087	0.8204	0.7896	0.8797	0.7955	0.72	0.83	0.8	0.9	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.46722	NA	NA	NA	NA	NA	0.797	NA	3.9579666
1256	12	57867520	57867520	A	G	intronic	ARHGAP9	NA	NA	NA	intronic	ENSG00000123329	NA	NA	NA	NA	NA	12q13.3	NA	NA	NA	NA	rs112991183	0.01	0.01	0.004	0.00519169	0.0139	NA	0.0072	NA	0.0072	0.01	NA	0.01	NA	0.0126	0.016	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.183777	NA	NA	0.015698	0.002497	NA	NA	NA	3.957802
1256	1	206623866	206623866	C	T	intronic	SRGAP2	NA	NA	NA	intronic	ENSG00000163486	NA	NA	NA	NA	NA	1q32.1	NA	NA	Name=13	NA	rs11809494	0.39	0.39	0.426	0.367412	0.5268	0.2708	0.4006	0.2829	0.3937	0.54	0.24	0.42	0.31	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.262622	NA	NA	0.515399	0.317919	NA	0.486	NA	3.957801
1256	9	100666931	100666931	C	T	UTR3	C9orf156	NM_016481:c.*84G>A	NA	NA	UTR3	ENSG00000136932	ENST00000375119:c.*84G>A,ENST00000375118:c.*84G>A	NA	NA	NA	NA	9q22.33	NA	NA	NA	NA	rs6586	0.59	0.59	0.61	0.618211	0.3757	0.8185	0.487	0.7398	0.59	0.39	0.82	0.46	0.75	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.376125	1.376125	NA	NA	NA	NA	0.572	NA	3.9576334
1256	21	38437763	38437763	C	G	UTR3	PIGP	NM_153682:c.*119G>C,NM_153681:c.*119G>C	NA	NA	UTR3	ENSG00000185808	ENST00000464265:c.*119G>C,ENST00000360525:c.*119G>C,ENST00000399098:c.*119G>C,ENST00000399103:c.*119G>C,ENST00000399102:c.*119G>C	NA	NA	NA	NA	21q22.13	NA	NA	NA	NA	rs7337	0.46	0.46	0.434	0.489018	0.3757	0.5694	0.4755	0.4418	0.5961	0.37	0.6	0.45	0.43	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.999889	NA	NA	NA	NA	NA	0.5	NA	3.9576334
1256	5	132546059	132546059	G	A	intronic	FSTL4	NA	NA	NA	ncRNA_intronic	ENSG00000248245	NA	NA	NA	NA	NA	5q31.1	NA	NA	NA	NA	rs3828692	0.41	0.41	0.411	0.407548	0.3757	0.3819	0.4654	0.4372	0.3855	0.38	0.41	0.46	0.41	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.35127	NA	NA	NA	NA	NA	0.514	NA	3.9576333
1256	1	23885599	23885599	T	C	intronic	ID3	NA	NA	NA	intronic	ENSG00000117318	NA	NA	NA	NA	NA	1p36.12	NA	Name=ZEB1_(SC-25388),Pol2	NA	NA	rs2067053	0.41	0.41	0.418	0.463658	0.337	0.3403	0.3473	0.6566	0.5429	0.34	0.35	0.36	0.64	0.3787	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.630521	NA	NA	0.326977	0.57626	NA	0.471	NA	3.957323
1256	10	32806991	32806991	T	A	intronic	CCDC7	NA	NA	NA	intronic	ENSG00000216937	NA	NA	NA	NA	NA	10p11.22	NA	NA	NA	NA	rs76503644	0.03	0.03	0.018	0.0233626	0.0427	0.001	0.0173	0.028	0.0245	0.04	0.0017	0.02	0.02	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.471848	NA	NA	NA	NA	NA	NA	NA	3.9573
1256	14	100741182	100741182	G	T	intronic	YY1	NA	NA	NA	intronic	ENSG00000100811	NA	NA	NA	NA	NA	14q32.2	NA	NA	NA	NA	rs115934889	0.04	0.04	0.023	0.0299521	0.0427	NA	0.0331	0.0582	0.0072	0.04	NA	0.03	0.07	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.567772	NA	NA	NA	NA	NA	0.036	NA	3.9573
1256	10	50373738	50373738	G	T	intronic	C10orf128	NA	NA	NA	intronic	ENSG00000204161	NA	NA	NA	NA	NA	10q11.23	NA	NA	NA	NA	rs77059741	0.01	0.01	0.011	0.00858626	0.0239	NA	0.0072	NA	0.0143	0.03	NA	0.01	NA	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.250422	NA	NA	0.018856	0.004335	NA	0.007	NA	3.957244
1256	1	79094081	79094081	T	A	intronic	IFI44L	NA	NA	NA	intronic	ENSG00000137959	NA	NA	NA	Score=431;Name=lod=75	NA	1p31.1	NA	NA	NA	NA	rs1333973	0.43	0.43	0.445	0.428514	0.3439	0.751	0.3516	0.3011	0.41	0.35	0.77	0.31	0.25	0.3824	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.208097	NA	NA	0.316576	0.302507	NA	0.507	NA	3.957124
1256	2	133554288	133554288	A	G	exonic	NCKAP5	NA	synonymous SNV	NCKAP5:NM_207363:exon12:c.T822C:p.R274R,NCKAP5:NM_207481:exon12:c.T822C:p.R274R	exonic	ENSG00000176771	NA	synonymous SNV	ENSG00000176771:ENST00000317721:exon10:c.T822C:p.R274R,ENSG00000176771:ENST00000405974:exon10:c.T822C:p.R274R,ENSG00000176771:ENST00000409213:exon12:c.T822C:p.R274R,ENSG00000176771:ENST00000409261:exon12:c.T822C:p.R274R	NA	NA	2q21.2	NA	NA	NA	NA	rs1868076	0.69	0.69	0.715	0.690695	0.5398	0.8899	0.6729	0.7126	0.6237	0.53	0.91	0.64	0.73	0.6214	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.141738	NA	NA	0.548379	0.706263	NA	0.71	NA	3.9570876
1256	15	34520863	34520863	A	G	intronic	EMC4	NA	NA	NA	UTR3	ENSG00000128463	ENST00000557879:c.*534A>G	NA	NA	NA	NA	15q14	NA	NA	NA	NA	rs17236784	0.21	0.21	0.184	0.214657	0.2097	0.2808	0.2089	0.1467	0.2474	0.22	0.27	0.21	0.12	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.217689	NA	NA	NA	NA	NA	0.109	NA	3.9569667
1256	2	102638615	102638615	C	T	intronic	IL1R2	NA	NA	NA	intronic	ENSG00000115590	NA	NA	NA	NA	NA	2q11.2	NA	NA	NA	NA	rs3218959	0.09	0.09	0.111	0.114018	0.005	0.001	0.0317	0.3669	0.0593	0.004	NA	0.02	0.39	0.0352	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.026123	NA	NA	0.002907	0.280527	NA	0.116	NA	3.956893
1256	8	87672990	87672990	A	G	intronic	CNGB3	NA	NA	NA	ncRNA_exonic	ENSG00000233915	NA	NA	NA	NA	NA	8q21.3	NA	NA	NA	NA	rs4960985	0.43	0.43	0.375	0.433506	0.3767	0.5357	0.5403	0.2799	0.5184	0.4	0.54	0.48	0.33	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.519645	NA	NA	NA	NA	NA	0.442	NA	3.9566333
1256	22	18293650	18293650	A	G	intronic	MICAL3	NA	NA	NA	ncRNA_exonic	ENSG00000093100	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs436590	0.52	0.52	0.544	0.550719	0.3767	0.4821	0.3573	0.9138	0.4468	0.37	0.46	0.42	0.87	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.977131	NA	NA	NA	NA	NA	0.406	NA	3.9566333
1256	3	183439652	183439652	T	C	intronic	YEATS2	NA	NA	NA	intronic	ENSG00000163872	NA	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs116502703	0.01	0.01	0.008	0.00998403	0.0159	0.001	0.0159	0.0015	0.0204	0.02	0.0017	0.02	0.002	0.0129	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.501844	3.501844	NA	0.014746	0.002204	NA	0.007	NA	3.956454
1256	17	80363266	80363266	A	G	intronic	OGFOD3	NA	NA	NA	intronic	ENSG00000181396	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs71375101	0.01	0.01	0.002	0.00439297	0.0139	NA	0.0029	NA	0.0061	0.01	0.0017	0.0028	NA	0.0132	0.017	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.38285	NA	NA	0.016512	0.002724	NA	NA	NA	3.956388
1256	3	186435561	186435561	G	A	intronic	KNG1	NA	NA	NA	ncRNA_intronic	ENSG00000197099	NA	NA	NA	NA	NA	3q27.3	NA	NA	NA	NA	rs13072823	0.14	0.14	0.115	0.152955	0.1262	0.0605	0.1556	0.2534	0.138	0.13	0.04	0.16	0.23	0.1385	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.743873	1.743873	NA	0.11225	0.249432	ID=COSN167114;OCCURENCE=1(large_intestine)	0.058	NA	3.9563833
1256	1	220955347	220955347	T	A	intronic	MARC2	NA	NA	NA	intronic	ENSG00000117791	NA	NA	NA	NA	NA	1q41	NA	NA	NA	NA	rs2279637	0.07	0.07	0.054	0.0750799	0.0437	0.2173	0.0187	0.0393	0.0491	0.04	0.17	0.02	0.04	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.707114	NA	NA	NA	NA	NA	0.058	NA	3.9563
1256	1	234452263	234452263	G	A	intronic	SLC35F3	NA	NA	NA	intronic	ENSG00000183780	NA	NA	NA	NA	NA	1q42.2	NA	NA	NA	NA	rs745858	0.06	0.06	0.054	0.0876597	0.0437	0.004	0.0821	0.1626	0.1217	0.04	0.0017	0.07	0.15	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.328229	NA	NA	NA	NA	NA	0.051	NA	3.9563
1256	2	109547280	109547280	G	A	intronic	EDAR	NA	NA	NA	intronic	ENSG00000135960	NA	NA	NA	NA	NA	2q12.3	NA	NA	NA	NA	rs78887701	0.02	0.02	0.025	0.0135783	0.0437	NA	0.0144	0.0015	0.0123	0.05	NA	0.01	0.0041	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.733211	NA	NA	NA	NA	NA	0.007	NA	3.9563
1256	7	23205634	23205634	C	T	intronic	KLHL7	NA	NA	NA	intronic	ENSG00000122550	NA	NA	NA	NA	NA	7p15.3	NA	NA	NA	NA	rs858312	0.04	0.04	0.033	0.0511182	0.0437	0.0129	0.0634	0.0567	0.0818	0.05	0.01	0.04	0.05	NA	0.054	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.272953	1.272953	NA	NA	NA	NA	0.036	NA	3.9563
1256	10	27701920	27701920	C	T	intronic	PTCHD3	NA	NA	NA	intronic	ENSG00000182077	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs11015752	0.13	0.13	0.132	0.118411	0.0437	0.3601	0.1052	0.0182	0.091	0.05	0.34	0.09	0.02	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.45167	NA	NA	NA	NA	NA	0.051	NA	3.9563
1256	12	132467128	132467128	C	T	intronic	EP400	NA	NA	NA	intronic	ENSG00000183495	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs113878817	0.02	0.02	0.016	0.0125799	0.0437	NA	0.0187	0.0023	0.0031	0.04	NA	0.02	0.01	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.202052	NA	NA	NA	NA	NA	0.014	NA	3.9563
1256	21	43518963	43518963	C	G	intronic	UMODL1	NA	NA	NA	intronic	ENSG00000177398	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs113802209	0.02	0.02	0.017	0.0207668	0.0437	NA	0.0159	0.0129	0.0327	0.04	NA	0.02	0.02	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.681162	NA	NA	NA	NA	NA	0.022	NA	3.9563
1256	22	30188672	30188672	C	T	intronic	ASCC2	NA	NA	NA	intronic	ENSG00000100325	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs2240364	0.07	0.07	0.055	0.0738818	0.0437	0.0853	0.0807	0.0703	0.093	0.05	0.1	0.07	0.08	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.414788	NA	NA	NA	NA	NA	0.08	NA	3.9563
1256	22	30218270	30218270	T	C	intronic	ASCC2	NA	NA	NA	intronic	ENSG00000100325	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs17711461	0.06	0.06	0.045	0.0589058	0.0437	0.0853	0.0706	0.0182	0.0941	0.05	0.1	0.06	0.02	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.577964	NA	NA	NA	NA	NA	0.051	NA	3.9563
1256	12	8689668	8689668	C	T	intronic	CLEC4E	NA	NA	NA	intronic	ENSG00000166523	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs112683446	0.01	0.01	0.004	0.00499201	0.0159	NA	0.0058	0.0015	0.0031	0.01	NA	0.01	NA	0.0109	0.017	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.370193	NA	NA	0.016977	0.001362	NA	0.007	NA	3.956223
1256	1	27687366	27687366	C	G	intronic	MAP3K6	NA	NA	NA	intronic	ENSG00000142733	NA	NA	NA	NA	NA	1p36.11	NA	Name=HMGN3	NA	NA	rs35733093	0.33	0.33	0.253	0.310304	0.3787	0.5546	0.219	0.093	0.3466	0.38	0.5	0.23	0.12	0.3325	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.122822	NA	NA	0.332596	0.138826	NA	0.116	NA	3.956204
1256	17	1518346	1518346	C	A	intronic	SLC43A2	NA	NA	NA	intronic	ENSG00000167703	NA	NA	NA	NA	NA	17p13.3	NA	NA	NA	NA	rs72820352	0.01	0.01	0.004	0.00419329	0.0139	NA	0.0072	0.0008	0.001	0.02	NA	0.01	NA	0.0144	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.96865	NA	NA	0.015581	0.002043	NA	0.007	NA	3.956119
1256	7	83631390	83631390	C	G	intronic	SEMA3A	NA	NA	NA	intronic	ENSG00000075213	NA	NA	NA	NA	NA	7q21.11	NA	NA	NA	NA	rs10234961	0.04	0.04	0.042	0.0413339	0.0139	0.0179	0.0101	0.1157	0.0153	0.02	0.02	0.01	0.11	0.0197	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.788915	NA	NA	0.010581	0.090785	NA	0.051	NA	3.955819
1256	17	45901480	45901480	C	T	UTR3	MRPL10	NM_145255:c.*91G>A,NM_148887:c.*91G>A	NA	NA	UTR3	ENSG00000159111	ENST00000351111:c.*91G>A,ENST00000290208:c.*91G>A,ENST00000414011:c.*91G>A,ENST00000421763:c.*879G>A	NA	NA	NA	NA	17q21.32	NA	NA	NA	NA	rs701984	0.35	0.35	0.314	0.335663	0.3777	0.6399	0.3329	0.0333	0.3896	0.38	0.62	0.3	0.04	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.516546	NA	NA	NA	NA	NA	0.217	NA	3.9556334
1256	19	35509879	35509879	C	T	intronic	GRAMD1A	NA	NA	NA	ncRNA_intronic	ENSG00000271032	NA	NA	NA	NA	NA	19q13.12	NA	NA	NA	NA	rs12461339	0.33	0.33	0.35	0.307508	0.3777	0.2173	0.3703	0.3873	0.1759	0.38	0.2	0.37	0.37	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.576291	NA	NA	NA	NA	NA	0.333	NA	3.9556333
1256	14	24761361	24761361	T	C	intronic	DHRS1	NA	NA	NA	intronic	ENSG00000157379	NA	NA	NA	NA	NA	14q12	NA	NA	NA	NA	rs142311425	0.01	0.01	0.004	0.00519169	0.0189	NA	0.0101	NA	NA	0.02	NA	0.01	NA	0.0114	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.157873	NA	NA	0.014302	0.003177	NA	NA	NA	3.955398
1256	20	60927349	60927349	C	T	exonic	LAMA5	NA	synonymous SNV	LAMA5:NM_005560:exon4:c.G636A:p.A212A	exonic	ENSG00000130702	NA	synonymous SNV	ENSG00000130702:ENST00000252999:exon4:c.G636A:p.A212A,ENSG00000130702:ENST00000370677:exon4:c.G636A:p.A212A,ENSG00000130702:ENST00000370692:exon4:c.G636A:p.A212A	Score=452;Name=lod=92	NA	20q13.33	NA	NA	NA	NA	rs483876	0.8	0.8	0.825	0.751198	0.9215	0.9405	0.8026	0.4213	0.7904	0.92	0.95	0.8	0.46	0.8605	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.290822	NA	NA	0.929353	0.526579	ID=COSM444175;OCCURENCE=1(breast),1(large_intestine)	0.674	NA	3.9553136
1256	1	89322809	89322809	C	T	intronic	GTF2B	NA	NA	NA	intronic	ENSG00000137947	NA	NA	NA	NA	NA	1p22.2	NA	NA	NA	NA	rs7534197	0.13	0.13	0.143	0.157548	0.0447	0.0317	0.0533	0.4486	0.0838	0.05	0.04	0.05	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.546624	NA	NA	NA	NA	NA	0.203	NA	3.9553
1256	7	66458112	66458112	T	C	intronic	SBDS	NA	NA	NA	intronic	ENSG00000126524	NA	NA	NA	NA	NA	7q11.21	NA	NA	NA	NA	rs142213835	0.02	0.02	0.018	0.0159744	0.0447	NA	0.036	0.0015	0.0082	0.04	NA	0.03	0.002	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.980568	NA	NA	NA	NA	NA	0.014	NA	3.9553
1256	11	76207199	76207199	G	C	intronic	C11orf30	NA	NA	NA	intronic	ENSG00000158636	NA	NA	NA	NA	NA	11q13.5	NA	NA	NA	NA	rs74680029	0.02	0.02	0.022	0.0205671	0.0447	NA	0.0245	0.0234	0.0102	0.04	NA	0.03	0.03	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.698402	2.698402	NA	NA	NA	NA	0.007	NA	3.9553
1256	11	76257453	76257453	T	C	intronic	C11orf30	NA	NA	NA	intronic	ENSG00000158636	NA	NA	NA	NA	NA	11q13.5	NA	NA	NA	NA	rs11602123	0.03	0.03	0.032	0.024361	0.0447	NA	0.0259	0.0371	0.0102	0.04	NA	0.03	0.06	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.140203	NA	NA	NA	NA	NA	0.014	NA	3.9553
1256	14	95903060	95903060	A	C	intronic	SYNE3	NA	NA	NA	intronic	ENSG00000176438	NA	NA	NA	NA	NA	14q32.13	NA	NA	NA	NA	rs78849563	0.04	0.04	0.046	0.0625	0.0447	0.002	0.036	0.093	0.1207	0.04	0.0017	0.04	0.09	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.114797	NA	NA	NA	NA	NA	0.036	NA	3.9553
1256	21	43518981	43518981	G	A	intronic	UMODL1	NA	NA	NA	intronic	ENSG00000177398	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs113060004	0.02	0.02	0.016	0.0209665	0.0447	NA	0.0159	0.0129	0.0327	0.04	NA	0.02	0.02	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.303524	NA	NA	NA	NA	NA	0.022	NA	3.9553
1256	21	43519364	43519364	G	A	intronic	UMODL1	NA	NA	NA	intronic	ENSG00000177398	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs112450832	0.02	0.02	0.017	0.0177716	0.0447	NA	0.0144	0.0015	0.0327	0.04	NA	0.02	0.002	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.806495	NA	NA	NA	NA	NA	0.007	NA	3.9553
1256	19	48783080	48783080	C	T	intronic	ZNF114	NA	NA	NA	intronic	ENSG00000178150	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs117587291	0.01	0.01	0.011	0.00599042	0.0219	NA	0.0029	NA	0.0061	0.03	NA	0.0028	NA	0.0119	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.058554	NA	NA	0.01093	0.002043	NA	NA	NA	3.95527
1256	10	135213138	135213138	G	A	intronic	MTG1	NA	NA	NA	intronic	ENSG00000148824,ENSG00000254536	NA	NA	NA	NA	NA	10q26.3	NA	NA	NA	NA	rs117686263	0.01	0.01	0.008	0.00439297	0.0149	NA	0.0086	NA	0.001	0.01	NA	0.02	NA	0.0103	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.694938	NA	NA	0.019535	0.004539	NA	0.014	NA	3.955265
1256	4	8390858	8390858	G	C	intronic	ACOX3	NA	NA	NA	intronic	ENSG00000087008	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs143888158	0.01	0.01	0.007	0.00658946	0.0189	NA	0.013	0.0015	0.0031	0.02	NA	0.01	0.002	0.0101	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.383794	NA	NA	0.015814	0.002497	NA	NA	NA	3.955186
1256	2	1652822	1652822	T	G	exonic	PXDN	NA	synonymous SNV	PXDN:NM_012293:exon17:c.A2730C:p.I910I	exonic	ENSG00000130508	NA	synonymous SNV	ENSG00000130508:ENST00000252804:exon17:c.A2730C:p.I910I	Score=429;Name=lod=74	NA	2p25.3	NA	NA	NA	NA	rs1863135	0.94	0.94	0.939	0.935503	0.8936	0.999	0.964	0.8729	0.9775	0.89	1	0.96	0.91	0.9176	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.007258	NA	NA	0.900291	0.896882	NA	0.833	NA	3.9551756
1256	16	2226243	2226243	C	G	intronic	TRAF7	NA	NA	NA	intronic	ENSG00000131653	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs11642042	0.01	0.01	0.006	0.00579073	0.0139	NA	0.013	0.0015	0.0041	0.01	NA	0.01	NA	0.0124	0.019	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.311483	NA	NA	0.018609	0.005705	NA	NA	NA	3.955091
1256	17	45385012	45385012	C	T	intronic	ITGB3	NA	NA	NA	ncRNA_intronic	ENSG00000263293	NA	NA	NA	NA	NA	17q21.32	Score=705;Name=V$PPARG_02	NA	NA	NA	rs3809863	0.4	0.4	0.397	0.398962	0.4642	0.252	0.3487	0.497	0.3865	0.48	0.27	0.41	0.44	0.4383	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.530083	NA	NA	0.475814	0.485247	NA	0.377	NA	3.9550193
1257	11	77811990	77811990	T	C	ncRNA_UTR3	ALG8	NA	NA	NA	UTR3	ENSG00000159063	ENST00000530608:c.*20A>G,ENST00000299626:c.*20A>G	NA	NA	NA	NA	11q14.1	Score=879;Name=V$NF1_Q6	NA	NA	NA	rs1263505	0.83	0.83	0.825	0.832668	0.8618	0.7351	0.7161	0.9501	0.8272	0.86	0.73	0.75	0.95	0.8319	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.223516	NA	NA	0.851468	0.936818	NA	0.891	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000082154.1;CLNDSDB=.;CLNDSDBID=.	3.954832
1257	1	226562112	226562112	C	G	intronic	PARP1	NA	NA	NA	intronic	ENSG00000143799	NA	NA	NA	NA	NA	1q42.12	NA	NA	NA	NA	rs1805401	0.02	0.02	0.019	0.0151757	0.0457	NA	0.0331	0.0015	0.0051	0.04	NA	0.04	0.002	NA	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.634737	NA	NA	NA	NA	NA	0.087	NA	3.9543
1257	3	148902950	148902950	T	C	intronic	CP	NA	NA	NA	intronic	ENSG00000047457	NA	NA	NA	NA	NA	3q25.1	NA	NA	NA	NA	rs35903829	0.02	0.02	0.013	0.0189696	0.0457	0.001	0.0346	0.0008	0.0235	0.04	0.0017	0.04	0.0041	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.224636	NA	NA	NA	NA	NA	0.058	NA	3.9543
1257	3	148905726	148905726	G	A	intronic	CP	NA	NA	NA	intronic	ENSG00000047457	NA	NA	NA	NA	NA	3q25.1	NA	NA	NA	NA	rs35516209	0.02	0.02	0.015	0.0195687	0.0457	0.001	0.036	0.0008	0.0256	0.04	0.0017	0.04	0.0041	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.311289	NA	NA	NA	NA	NA	0.065	NA	3.9543
1257	3	189590871	189590871	G	A	intronic	TP63	NA	NA	NA	intronic	ENSG00000073282	NA	NA	NA	NA	NA	3q28	NA	NA	NA	NA	rs111843185	0.04	0.04	0.034	0.0519169	0.0457	0.0595	0.0317	0.0166	0.1125	0.05	0.06	0.02	0.01	NA	0.076	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.179797	NA	NA	NA	NA	NA	0.051	NA	3.9543
1257	4	145985616	145985616	C	T	intronic	ANAPC10	NA	NA	NA	intronic	ENSG00000164162	NA	NA	NA	NA	NA	4q31.21	NA	NA	NA	NA	rs35754508	0.02	0.02	0.006	0.0177716	0.0457	NA	0.0115	NA	0.0358	0.04	NA	0.02	NA	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.727909	NA	NA	NA	NA	NA	0.043	NA	3.9543
1257	14	45489944	45489944	C	G	intronic	FAM179B	NA	NA	NA	intronic	ENSG00000179454,ENSG00000198718	NA	NA	NA	NA	NA	14q21.2	NA	NA	NA	NA	rs111996076	0.03	0.03	0.022	0.0321486	0.0457	0.001	0.0793	0.003	0.0562	0.04	NA	0.06	0.01	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.303867	NA	NA	NA	NA	NA	0.022	NA	3.9543
1257	15	42442186	42442186	A	G	intronic	PLA2G4F	NA	NA	NA	intronic	ENSG00000168907	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs60486546	0.15	0.15	0.157	0.187899	0.0457	0.1101	0.1268	0.4342	0.1247	0.04	0.09	0.14	0.4	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.344595	NA	NA	NA	NA	NA	0.196	NA	3.9543
1257	19	45314324	45314324	T	C	intronic	BCAM	NA	NA	NA	intronic	ENSG00000187244	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs28399607	0.02	0.02	0.011	0.0221645	0.0457	NA	0.0159	0.0045	0.0491	0.04	NA	0.01	0.01	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.405605	NA	NA	NA	NA	NA	0.072	NA	3.9543
1257	22	30202079	30202079	G	A	intronic	ASCC2	NA	NA	NA	intronic	ENSG00000100325	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs12159277	0.13	0.13	0.134	0.146366	0.0457	0.0853	0.0893	0.3389	0.093	0.05	0.1	0.07	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.345812	NA	NA	NA	NA	NA	0.13	NA	3.9543
1257	22	30218213	30218213	C	A	intronic	ASCC2	NA	NA	NA	intronic	ENSG00000100325	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs73394831	0.13	0.13	0.134	0.148962	0.0457	0.0883	0.0893	0.3457	0.0941	0.05	0.1	0.07	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.470484	NA	NA	NA	NA	NA	0.152	NA	3.9543
1257	2	10915020	10915020	A	G	intronic	ATP6V1C2	NA	NA	NA	intronic	ENSG00000143882	NA	NA	NA	NA	NA	2p25.1	NA	Name=GATA-2	NA	NA	rs2969881	0.37	0.37	0.343	0.397963	0.331	0.4067	0.3905	0.4327	0.4162	0.34	0.36	0.4	0.41	0.3722	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.078669	NA	NA	0.342907	0.383114	NA	0.29	NA	3.953893
1257	21	46951556	46951556	A	G	exonic	SLC19A1	NA	synonymous SNV	SLC19A1:NM_001205207:exon2:c.T576C:p.P192P,SLC19A1:NM_001205206:exon3:c.T696C:p.P232P,SLC19A1:NM_194255:exon3:c.T696C:p.P232P	exonic	ENSG00000173638	NA	synonymous SNV	ENSG00000173638:ENST00000485649:exon2:c.T576C:p.P192P,ENSG00000173638:ENST00000311124:exon3:c.T696C:p.P232P,ENSG00000173638:ENST00000380010:exon3:c.T696C:p.P232P,ENSG00000173638:ENST00000567670:exon3:c.T696C:p.P232P	NA	NA	21q22.3	NA	NA	NA	NA	rs12659	0.53	0.53	0.497	0.553115	0.5557	0.4752	0.5908	0.5189	0.6503	0.57	0.47	0.58	0.52	0.5775	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.792786	NA	NA	0.579651	0.55881	NA	0.341	NA	3.9538156
1257	3	29628722	29628722	T	C	intronic	RBMS3	NA	NA	NA	intronic	ENSG00000144642	NA	NA	NA	NA	NA	3p24.1	NA	NA	NA	NA	rs56049588	0.05	0.05	NA	NA	NA	NA	NA	NA	NA	0.07	0.0017	0.04	0.08	0.0463	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.951928	1.951928	NA	NA	NA	NA	0.007	NA	3.9537
1257	19	36940760	36940760	G	T	exonic	ZNF566	NA	synonymous SNV	ZNF566:NM_001145343:exon5:c.C379A:p.R127R,ZNF566:NM_001145344:exon5:c.C376A:p.R126R,ZNF566:NM_001145345:exon5:c.C376A:p.R126R,ZNF566:NM_032838:exon5:c.C376A:p.R126R	exonic	ENSG00000186017	NA	synonymous SNV	ENSG00000186017:ENST00000493391:exon3:c.C64A:p.R22R,ENSG00000186017:ENST00000392170:exon5:c.C379A:p.R127R,ENSG00000186017:ENST00000424129:exon5:c.C376A:p.R126R,ENSG00000186017:ENST00000427002:exon5:c.C379A:p.R127R,ENSG00000186017:ENST00000434377:exon5:c.C376A:p.R126R,ENSG00000186017:ENST00000452939:exon5:c.C376A:p.R126R,ENSG00000186017:ENST00000454319:exon5:c.C379A:p.R127R	NA	NA	19q13.12	NA	NA	NA	NA	rs2967532	0.48	0.48	0.498	0.496406	0.5885	0.2669	0.3991	0.5968	0.5716	0.57	0.26	0.45	0.62	0.5334	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.017489	NA	NA	0.591163	0.613936	NA	0.5	NA	3.9536036
1257	4	40895453	40895453	G	A	intronic	APBB2	NA	NA	NA	intronic	ENSG00000163697	NA	NA	NA	NA	NA	4p14	NA	NA	NA	NA	rs115694824	0.01	0.01	0.007	0.00599042	0.0149	NA	0.0029	0.0015	0.0112	0.02	NA	0.0028	0.002	0.0133	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.549009	NA	NA	0.018399	0.00324	NA	0.007	NA	3.953401
1257	1	35944886	35944886	T	C	intronic	KIAA0319L	NA	NA	NA	intronic	ENSG00000142687	NA	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	rs7545232	0.29	0.29	0.298	0.293131	0.0467	0.5278	0.2262	0.4047	0.2014	0.04	0.57	0.22	0.4	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.980716	NA	NA	NA	NA	NA	0.196	NA	3.9533
1257	7	30701665	30701665	T	C	intronic	CRHR2	NA	NA	NA	intronic	ENSG00000106113	NA	NA	NA	NA	NA	7p14.3	NA	NA	NA	NA	rs149265265	0.02	0.02	0.018	0.0141773	0.0467	NA	0.0317	0.0015	NA	0.04	NA	0.03	0.0041	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.122341	NA	NA	NA	NA	NA	0.022	NA	3.9533
1257	10	101637161	101637161	G	A	intronic	DNMBP	NA	NA	NA	intronic	ENSG00000107554	NA	NA	NA	NA	NA	10q24.2	NA	NA	NA	NA	rs2256276	0.09	0.09	0.1	0.101837	0.0467	0.0218	0.0821	0.2769	0.0184	0.04	0.03	0.08	0.25	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.115673	NA	NA	NA	NA	NA	0.094	NA	3.9533
1257	11	105482909	105482909	G	T	intronic	GRIA4	NA	NA	NA	intronic	ENSG00000152578	NA	NA	NA	NA	NA	11q22.3	NA	NA	NA	NA	rs79868289	0.02	0.02	0.017	0.0169728	0.0467	0.001	0.0317	0.003	0.0112	0.04	0.0017	0.04	0.002	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.505656	1.505656	NA	NA	NA	NA	0.014	NA	3.9533
1257	12	122396573	122396573	C	T	intronic	WDR66	NA	NA	NA	intronic	ENSG00000158023	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs7300379	0.23	0.23	0.249	0.301717	0.0467	0.2937	0.0706	0.6036	0.3282	0.05	0.26	0.08	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.19915	NA	NA	NA	NA	NA	0.152	NA	3.9533
1257	18	13041032	13041032	G	A	intronic	CEP192	NA	NA	NA	intronic	ENSG00000101639	NA	NA	NA	NA	NA	18p11.21	NA	NA	NA	NA	rs79796549	0.02	0.02	0.017	0.0159744	0.0467	0.001	0.0173	0.0038	0.0153	0.04	0.0017	0.02	0.01	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.171473	NA	NA	NA	NA	NA	0.022	NA	3.9533
1257	19	54783035	54783035	T	G	intronic	LILRB2	NA	NA	NA	intronic	ENSG00000131042	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs55904418	0.03	0.03	0.016	0.0505192	0.0467	0.0278	0.1009	0.0083	0.0992	0.05	0.02	0.06	0.01	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.71353	NA	NA	NA	NA	NA	0.036	NA	3.9533
1257	19	57795783	57795783	A	G	intronic	ZNF460	NA	NA	NA	intronic	ENSG00000197714	NA	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs74345217	0.03	0.03	0.026	0.0367412	0.0467	0.0625	0.0504	0.003	0.0358	0.04	0.04	0.05	0.0041	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.448137	NA	NA	NA	NA	NA	0.007	NA	3.9533
1257	20	31812298	31812298	G	T	intronic	BPIFA3	NA	NA	NA	intronic	ENSG00000131059	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs2180674	0.11	0.11	0.121	0.123403	0.006	0.0308	0.0303	0.4236	NA	0.01	0.03	0.04	0.4	0.0378	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2694	NA	NA	0.003256	0.347027	NA	0.138	NA	3.952944
1257	5	137625141	137625141	C	G	intronic	CDC25C	NA	NA	NA	intronic	ENSG00000158402	NA	NA	NA	NA	NA	5q31.2	NA	NA	NA	NA	rs11567998	0.01	0.01	0.008	0.0071885	0.0199	NA	0.0115	0.0015	0.0061	0.02	NA	0.01	0.002	0.0098	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.942462	2.942462	NA	0.017442	0.002497	NA	0.08	NA	3.952858
1257	3	158522190	158522190	T	C	intronic	MFSD1	NA	NA	NA	intronic	ENSG00000118855	NA	NA	NA	NA	NA	3q25.32	NA	NA	NA	NA	rs79796809	0.01	0.01	0.004	0.00938498	0.0209	NA	0.0072	0.0008	0.0204	0.01	NA	0.01	NA	0.0116	0.015	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.331582	NA	NA	0.014767	0.001362	NA	0.007	NA	3.952733
1257	3	118648879	118648879	A	G	intronic	IGSF11	NA	NA	NA	intronic	ENSG00000144847	NA	NA	NA	NA	NA	3q13.32	NA	NA	NA	NA	rs12495725	0.08	0.08	0.049	0.0611022	0.0477	0.0556	0.1988	0.0386	0.0133	0.05	0.07	0.2	0.05	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.110772	NA	NA	NA	NA	NA	0.051	NA	3.9523
1257	5	35072620	35072620	A	G	intronic	PRLR	NA	NA	NA	intronic	ENSG00000113494	NA	NA	NA	NA	NA	5p13.2	NA	NA	NA	NA	rs57717665	0.08	0.08	0.08	0.106629	0.0477	0.0427	0.0576	0.2504	0.0736	0.04	0.04	0.06	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.879373	NA	NA	NA	NA	NA	0.072	NA	3.9523
1257	5	171785702	171785702	A	G	intronic	SH3PXD2B	NA	NA	NA	intronic	ENSG00000174705	NA	NA	NA	NA	NA	5q35.1	NA	NA	NA	NA	rs17703000	0.05	0.05	0.043	0.0800719	0.0477	0.0317	0.0749	0.0287	0.2362	0.05	0.04	0.08	0.03	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.124824	NA	NA	NA	NA	NA	0.087	NA	3.9523
1257	6	44115864	44115864	A	G	intronic	TMEM63B	NA	NA	NA	intronic	ENSG00000137216	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs1539379	0.14	0.14	0.142	0.120407	0.0477	0.2232	0.1527	0.1157	0.0726	0.05	0.26	0.13	0.13	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.552654	NA	NA	NA	NA	NA	0.101	NA	3.9523
1257	8	19682577	19682577	G	A	intronic	INTS10	NA	NA	NA	intronic	ENSG00000104613	NA	NA	NA	NA	NA	8p21.3	NA	NA	NA	NA	rs6997363	0.09	0.09	0.078	0.10024	0.0477	0.1647	0.0692	0.09	0.1237	0.05	0.17	0.07	0.09	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.632766	NA	NA	NA	NA	NA	0.087	NA	3.9523
1257	11	123880596	123880596	C	T	intergenic	OR10S1,OR10G4	dist=32198;dist=5686	NA	NA	ncRNA_exonic	ENSG00000226461	NA	NA	NA	NA	NA	11q24.1	NA	NA	NA	NA	rs17128126	0.08	0.08	0.086	0.091853	0.0477	0.0506	0.0375	0.1899	0.0859	0.05	0.06	0.03	0.18	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.329105	NA	1	NA	NA	NA	0.116	NA	3.9523
1257	12	43963769	43963769	A	G	intergenic	ADAMTS20,PUS7L	dist=18045;dist=158641	NA	NA	ncRNA_exonic	ENSG00000257813	NA	NA	NA	NA	NA	12q12	NA	NA	NA	NA	rs75198585	0.02	0.02	0.023	0.0167732	0.0477	NA	0.0274	0.0023	0.0143	0.05	NA	0.02	0.0041	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.361323	NA	NA	NA	NA	NA	0.007	NA	3.9523
1257	19	41235038	41235038	C	G	intronic	ITPKC	NA	NA	NA	intronic	ENSG00000086544	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs10420651	0.14	0.14	0.145	0.126997	0.0477	0.2252	0.0533	0.2088	0.0491	0.05	0.25	0.07	0.22	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.940955	NA	NA	NA	NA	NA	0.101	NA	3.9523
1257	21	43241316	43241316	A	G	intronic	PRDM15	NA	NA	NA	intronic	ENSG00000141956	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs3934698	0.06	0.06	0.049	0.0824681	0.0477	0.004	0.0504	0.1573	0.1207	0.05	0.0017	0.05	0.14	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.786842	NA	NA	NA	NA	NA	0.058	NA	3.9523
1257	22	25255950	25255950	C	T	intronic	SGSM1	NA	NA	NA	intronic	ENSG00000167037	NA	NA	NA	NA	NA	22q11.23	NA	NA	NA	NA	rs139701	0.12	0.12	0.132	0.140775	0.0477	0.0992	0.0879	0.3154	0.0808	0.05	0.07	0.09	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.847536	NA	NA	NA	NA	NA	0.152	NA	3.9523
1257	22	36889606	36889606	A	G	intronic	FOXRED2	NA	NA	NA	intronic	ENSG00000100350	NA	NA	NA	NA	NA	22q12.3	NA	NA	NA	NA	rs112675679	0.02	0.02	0.007	0.0189696	0.0477	NA	0.0187	0.003	0.0307	0.06	NA	0.01	0.0041	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.37412	NA	NA	NA	NA	NA	0.014	NA	3.9523
1257	22	39629609	39629609	G	A	intronic	PDGFB	NA	NA	NA	intronic	ENSG00000100311	NA	NA	NA	NA	NA	22q13.1	NA	NA	NA	NA	rs9622979	0.09	0.09	0.104	0.13119	0.0477	0.0724	0.1182	0.2186	0.1687	0.04	0.06	0.09	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.455663	NA	NA	NA	NA	NA	0.109	NA	3.9523
1257	3	193062921	193062921	T	C	intronic	ATP13A5	NA	NA	NA	intronic	ENSG00000187527	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs116545953	0.01	0.01	0.005	0.0105831	0.0268	NA	0.0274	NA	0.0072	0.02	NA	0.04	NA	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.482341	NA	NA	0.021684	0.003613	NA	0.022	NA	3.951516
1257	18	3134826	3134826	A	C	intronic	MYOM1	NA	NA	NA	intronic	ENSG00000101605	NA	NA	NA	NA	NA	18p11.31	NA	NA	NA	NA	rs143030509	0.01	0.01	0.009	0.00599042	0.0249	NA	0.0043	NA	0.002	0.03	NA	0.01	NA	0.0101	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.809911	NA	NA	0.013615	0.000806	NA	NA	NA	3.951385
1257	8	138709068	138709068	C	T	intergenic	NONE,FAM135B	dist=NONE;dist=433198	NA	NA	ncRNA_exonic	ENSG00000254076	NA	NA	NA	NA	NA	8q24.23	NA	NA	NA	NA	rs61415388	0.14	0.14	0.145	0.158946	0.0487	0.1577	0.0749	0.2882	0.1585	0.04	0.18	0.08	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.639525	NA	NA	NA	NA	NA	0.174	NA	3.9513
1257	8	138709210	138709210	A	G	intergenic	NONE,FAM135B	dist=NONE;dist=433056	NA	NA	ncRNA_exonic	ENSG00000254076	NA	NA	NA	NA	NA	8q24.23	NA	NA	NA	NA	rs57978144	0.14	0.14	0.137	0.158746	0.0487	0.1567	0.0749	0.2882	0.1585	0.04	0.17	0.08	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.79698	NA	NA	NA	NA	NA	0.174	NA	3.9513
1257	7	2553030	2553030	T	C	intronic	LFNG	NA	NA	NA	intronic	ENSG00000106003	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs73049130	0.03	0.03	0.024	0.0239617	0.0487	0.001	0.0807	0.0008	0.0133	0.05	0.0017	0.06	0.002	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.478771	NA	NA	NA	NA	NA	0.13	NA	3.9513
1257	8	23002444	23002444	C	T	intronic	TNFRSF10D	NA	NA	NA	intronic	ENSG00000173530	NA	NA	NA	NA	NA	8p21.3	NA	NA	NA	NA	rs75163938	0.02	0.02	0.021	0.0139776	0.0487	NA	0.0216	0.0008	0.0051	0.05	NA	0.02	0.002	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.047477	NA	NA	NA	NA	NA	0.014	NA	3.9513
1257	10	124001363	124001363	C	G	intronic	TACC2	NA	NA	NA	intronic	ENSG00000138162	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs4752674	0.07	0.07	0.046	0.0726837	0.0487	0.12	0.1037	0.0023	0.1217	0.05	0.12	0.09	0.002	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.561171	NA	NA	NA	NA	ID=COSN163797;OCCURENCE=1(breast)	0.014	NA	3.9513
1257	12	132516386	132516386	C	T	intronic	EP400	NA	NA	NA	intronic	ENSG00000183495	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs113573118	0.02	0.02	0.02	0.0135783	0.0487	NA	0.0187	0.0023	0.0031	0.05	NA	0.02	0.01	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.718014	NA	NA	NA	NA	NA	0.022	NA	3.9513
1257	22	18018913	18018913	A	G	intronic	CECR2	NA	NA	NA	intronic	ENSG00000099954	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs62241413	0.11	0.11	0.121	0.13139	0.0487	0.0179	0.062	0.3941	0.0276	0.05	0.02	0.06	0.34	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.400311	NA	NA	NA	NA	NA	0.101	NA	3.9513
1257	19	39866540	39866540	G	A	intronic	SAMD4B	NA	NA	NA	intronic	ENSG00000179134	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs73547912	0.04	0.04	0.045	0.0389377	0.0169	0.0298	0.0115	0.0877	0.0245	0.02	0.02	0.02	0.12	0.0204	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.013733	NA	NA	0.011628	0.080572	NA	0.051	NA	3.951072
1257	4	177094542	177094542	T	C	intronic	WDR17	NA	NA	NA	intronic	ENSG00000150627	NA	NA	NA	NA	NA	4q34.2	NA	NA	NA	NA	rs114302658	0.01	0.01	0.014	0.0115815	0.0159	NA	0.0101	0.0227	0.0051	0.01	NA	0.01	0.02	0.0166	0.024	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.287874	NA	NA	0.016632	0.023853	NA	NA	NA	3.950868
1257	8	144889172	144889172	A	G	exonic	SCRIB	NA	synonymous SNV	SCRIB:NM_015356:exon17:c.T2190C:p.T730T,SCRIB:NM_182706:exon17:c.T2190C:p.T730T	exonic	ENSG00000180900	NA	synonymous SNV	ENSG00000180900:ENST00000531942:exon2:c.T81C:p.T27T,ENSG00000180900:ENST00000320476:exon17:c.T2190C:p.T730T,ENSG00000180900:ENST00000356994:exon17:c.T2190C:p.T730T,ENSG00000180900:ENST00000377533:exon17:c.T1947C:p.T649T	Score=423;Name=lod=70	NA	8q24.3	NA	NA	NA	NA	rs10866915	0.88	0.88	0.862	0.883586	0.8986	0.9752	0.9251	0.7186	0.9673	0.9	0.98	0.9	0.73	0.9096	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.065249	NA	NA	0.907769	0.761245	ID=COSM1489084,COSM454165;OCCURENCE=1(breast)	0.848	NA	3.9506976
1257	7	117874476	117874476	T	C	intronic	ANKRD7	NA	NA	NA	intronic	ENSG00000106013	NA	NA	NA	NA	NA	7q31.31	NA	NA	NA	NA	rs117395317	0.04	0.04	0.036	0.0315495	0.0139	0.0645	0.0346	0.0227	0.0256	0.01	0.07	0.05	0.03	0.0265	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.180778	NA	NA	0.009264	0.018459	NA	0.007	NA	3.950336
1257	12	111290599	111290599	G	A	intronic	CCDC63	NA	NA	NA	intronic	ENSG00000173093	NA	NA	NA	NA	NA	12q24.11	NA	NA	NA	NA	rs7952822	0.07	0.07	0.079	0.0892572	0.0497	0.0149	0.0461	0.1952	0.0941	0.05	0.01	0.05	0.18	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.023508	NA	NA	NA	NA	NA	0.058	NA	3.9503
1257	16	57139069	57139069	C	T	intronic	CPNE2	NA	NA	NA	intronic	ENSG00000140848	NA	NA	NA	NA	NA	16q13	NA	NA	NA	NA	rs111843362	0.02	0.02	0.013	0.0157748	0.0497	NA	0.0231	0.0038	0.0082	0.05	NA	0.03	0.002	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.942803	NA	NA	NA	NA	NA	0.007	NA	3.9503
1257	19	55209046	55209046	G	A	intergenic	LILRB4,LILRP2	dist=29200;dist=10555	NA	NA	ncRNA_exonic	ENSG00000186152	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs78843029	0.07	0.07	0.062	0.0686901	0.0497	0.126	0.0951	0.0038	0.0982	0.06	0.13	0.09	0.01	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.829831	NA	NA	NA	NA	NA	0.036	NA	3.9503
1257	15	52539825	52539825	C	A	intronic	MYO5C	NA	NA	NA	intronic	ENSG00000128833	NA	NA	NA	NA	NA	15q21.2	NA	NA	NA	NA	rs55870025	0.07	0.07	0.05	0.0664936	0.0099	0.1022	0.0533	0.115	0.0317	0.01	0.11	0.04	0.12	0.0304	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.545508	NA	NA	0.009536	0.085838	NA	0.087	NA	3.950164
1257	4	169086441	169086441	A	G	exonic	ANXA10	NA	synonymous SNV	ANXA10:NM_007193:exon6:c.A444G:p.S148S	exonic	ENSG00000109511	NA	synonymous SNV	ENSG00000109511:ENST00000359299:exon6:c.A444G:p.S148S	NA	NA	4q32.3	NA	NA	NA	NA	rs4405979	0.51	0.51	0.516	0.532947	0.5934	0.2421	0.4697	0.7443	0.5297	0.58	0.24	0.53	0.7	0.5397	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.333543	NA	NA	0.583624	0.71448	ID=COSM149756;OCCURENCE=1(stomach)	0.406	NA	3.9499426
1257	17	4536832	4536832	G	A	intronic	ALOX15	NA	NA	NA	intronic	ENSG00000161905	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs11568125	0.04	0.04	0.041	0.0489217	0.008	NA	0.0274	0.1256	0.0532	0.01	NA	0.02	0.14	0.027	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.130312	NA	NA	0.015233	0.11507	NA	0.058	NA	3.949767
1257	9	107579750	107579750	C	T	intronic	ABCA1	NA	NA	NA	intronic	ENSG00000165029	NA	NA	NA	NA	NA	9q31.1	NA	NA	NA	NA	rs13292447	0.01	0.01	0.01	0.013778	0.0249	NA	0.0231	0.0015	0.0266	0.03	NA	0.03	0.0041	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.497117	NA	NA	0.02577	0.006503	NA	0.014	NA	3.94933
1257	1	12316371	12316371	G	T	intronic	VPS13D	NA	NA	NA	intronic	ENSG00000048707	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs235247	0.03	0.03	0.032	0.0329473	0.0099	NA	0.0159	0.1029	0.0082	0.01	NA	0.02	0.11	0.0216	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.188876	NA	NA	0.019186	0.104176	NA	0.022	NA	3.949314
1257	1	21806840	21806840	G	A	intronic	NBPF3	NA	NA	NA	intronic	ENSG00000142794	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs150499904	0.09	0.09	0.049	0.048722	0.0507	NA	0.0403	0.1029	0.0297	0.1	0.04	0.07	0.13	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.044087	NA	NA	NA	NA	NA	0.043	NA	3.9493
1257	1	54717654	54717654	T	C	intronic	SSBP3	NA	NA	NA	intronic	ENSG00000157216	NA	NA	NA	NA	NA	1p32.3	NA	NA	NA	NA	rs2297029	0.06	0.06	0.035	0.104433	0.0507	0.0387	0.0865	0.093	0.2556	0.05	0.03	0.1	0.07	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.147747	NA	NA	NA	NA	NA	0.051	NA	3.9493
1257	9	113213740	113213740	T	C	intronic	SVEP1	NA	NA	NA	intronic	ENSG00000165124	NA	NA	NA	NA	NA	9q31.3	NA	NA	NA	NA	rs10817022	0.02	0.02	0.02	0.0189696	0.0507	NA	0.0432	0.0023	0.0112	0.05	NA	0.04	0.0041	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.860877	NA	NA	NA	NA	NA	0.007	NA	3.9493
1257	15	42443049	42443049	G	A	intronic	PLA2G4F	NA	NA	NA	intronic	ENSG00000168907	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs74009020	0.17	0.17	0.157	0.21226	0.0507	0.1121	0.3055	0.4266	0.1258	0.04	0.09	0.24	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.172323	NA	NA	NA	NA	NA	0.203	NA	3.9493
1257	15	72899991	72899991	C	T	intergenic	MIR630,GOLGA6B	dist=20337;dist=47047	NA	NA	ncRNA_intronic	ENSG00000260144	NA	NA	NA	NA	NA	15q24.1	NA	NA	NA	NA	rs28435710	0.12	0.12	0.108	0.131989	0.0507	0.002	0.147	0.3669	0.0215	0.03	0.0035	0.13	0.37	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.763054	NA	NA	NA	NA	NA	0.123	NA	3.9493
1257	16	78143584	78143584	G	T	intronic	WWOX	NA	NA	NA	intronic	ENSG00000186153	NA	NA	NA	NA	NA	16q23.1	NA	NA	NA	NA	rs117470523	0.02	0.02	0.028	0.01877	0.0507	NA	0.0288	0.003	0.0194	0.05	NA	0.03	0.0041	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.384811	NA	NA	NA	NA	NA	0.036	NA	3.9493
1257	6	30861000	30861000	C	T	intronic	DDR1	NA	NA	NA	intronic	ENSG00000204580	NA	NA	NA	NA	NA	6p21.33	NA	Name=Rad21,CTCF,CTCF_(SC-5916)	NA	NA	rs1264320	0.24	0.24	0.253	0.222843	0.3559	0.248	0.2075	0.0983	0.2393	0.35	0.28	0.2	0.06	0.325	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.851188	NA	NA	0.36997	0.139192	NA	0.239	NA	3.94913
1257	6	94067981	94067981	C	T	exonic	EPHA7	NA	synonymous SNV	EPHA7:NM_004440:exon4:c.G981A:p.A327A	exonic	ENSG00000135333	NA	synonymous SNV	ENSG00000135333:ENST00000369303:exon4:c.G981A:p.A327A	NA	NA	6q16.1	NA	NA	NA	NA	rs164544	0.72	0.72	0.723	0.730431	0.5527	0.8294	0.6455	0.8911	0.6544	0.59	0.83	0.59	0.88	0.6284	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.418665	NA	NA	0.536744	0.830458	NA	0.652	NA	3.9488226
1257	1	201031059	201031059	A	G	intronic	CACNA1S	NA	NA	NA	intronic	ENSG00000081248	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs41267501	0.01	0.01	0.006	0.0115815	0.0129	NA	0.0159	0.0008	0.0337	0.01	NA	0.02	NA	0.0179	0.021	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.189981	NA	NA	0.020465	0.002724	NA	NA	NA	3.948735
1257	17	56440542	56440542	G	T	intronic	RNF43	NA	NA	NA	ncRNA_intronic	ENSG00000265148	NA	NA	NA	NA	NA	17q22	NA	NA	NA	NA	rs2680700	0.28	0.28	0.244	0.247204	0.3847	0.2103	0.3199	0.143	0.2331	0.38	0.24	0.32	0.14	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.160639	NA	NA	NA	NA	NA	0.348	NA	3.9486333
1257	10	94733781	94733781	G	T	intronic	EXOC6	NA	NA	NA	intronic	ENSG00000138190	NA	NA	NA	NA	NA	10q23.33	NA	NA	NA	NA	rs41290182	0.01	0.01	0.006	0.0091853	0.0199	NA	0.0173	0.0015	0.0123	0.02	NA	0.02	0.0041	0.014	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.156417	NA	NA	0.017558	0.001589	NA	NA	NA	3.948542
1257	10	127460952	127460952	G	T	intronic	MMP21	NA	NA	NA	intronic	ENSG00000154485	NA	NA	NA	NA	NA	10q26.13	NA	Name=ZNF263,CTCF	NA	NA	rs10901424	0.25	0.25	0.25	0.211262	0.3748	0.13	0.2435	0.1649	0.1667	0.37	0.13	0.26	0.18	0.2953	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.414983	NA	NA	0.381512	0.195415	ID=COSN163807;OCCURENCE=1(breast)	0.261	NA	3.948388
1257	2	95818809	95818809	C	A	intronic	ZNF514	NA	NA	NA	intronic	ENSG00000144026	NA	NA	NA	NA	NA	2q11.1	NA	NA	NA	NA	rs79435252	0.03	0.03	0.019	0.0249601	0.0517	NA	0.072	0.003	0.0194	0.06	NA	0.07	0.0041	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.672575	NA	NA	NA	NA	NA	0.014	NA	3.9483
1257	8	2042036	2042036	C	T	intronic	MYOM2	NA	NA	NA	intronic	ENSG00000036448	NA	NA	NA	NA	NA	8p23.3	NA	NA	NA	NA	rs7841053	0.06	0.06	0.052	0.0593051	0.0517	0.0238	0.062	0.1293	0.0072	0.05	0.03	0.07	0.11	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.323221	NA	NA	NA	NA	NA	0.029	NA	3.9483
1257	9	18639484	18639484	C	T	intronic	ADAMTSL1	NA	NA	NA	intronic	ENSG00000178031	NA	NA	NA	NA	NA	9p22.1	NA	NA	NA	NA	rs702207	0.09	0.09	0.095	0.0986422	0.0517	0.001	0.0533	0.3041	0.002	0.05	NA	0.06	0.27	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.366662	NA	NA	NA	NA	NA	0.087	NA	3.9483
1257	1	220978659	220978659	G	A	intronic	MARC1	NA	NA	NA	intronic	ENSG00000186205	NA	NA	NA	NA	NA	1q41	NA	NA	NA	NA	rs72472335	0.05	0.05	0.044	0.0499201	0.0149	0.0496	0.0303	0.0726	0.0695	0.01	0.07	0.03	0.08	0.0267	0.087	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.666075	NA	NA	0.010233	0.063096	NA	0.058	NA	3.948167
1257	12	124427887	124427887	G	C	intronic	CCDC92	NA	NA	NA	intronic	ENSG00000119242	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs111854458	0.01	0.01	0.008	0.00798722	0.0189	0.005	0.0072	0.0008	0.0102	0.02	NA	0.01	0.002	0.0133	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.088754	NA	NA	0.019767	0.004085	NA	0.014	NA	3.948033
1257	5	13867851	13867851	G	A	intronic	DNAH5	NA	NA	NA	ncRNA_intronic	ENSG00000251423	NA	NA	NA	NA	NA	5p15.2	NA	NA	NA	NA	rs13156044	0.12	0.12	0.115	0.101438	0.1451	0.1032	0.0821	0.1256	0.0358	0.15	0.09	0.09	0.14	0.109	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.162385	NA	NA	0.131395	0.117794	NA	0.101	NA	3.9478383
1257	11	17515833	17515833	A	G	UTR3	USH1C	NM_005709:c.*78T>C,NM_153676:c.*46T>C	NA	NA	UTR3	ENSG00000006611	ENST00000318024:c.*78T>C,ENST00000526313:c.*451T>C,ENST00000527720:c.*78T>C,ENST00000527020:c.*78T>C	NA	NA	NA	NA	11p15.1	NA	NA	Name=4	NA	rs1055574	0.38	0.38	0.375	0.370407	0.4602	0.2946	0.3199	0.3873	0.3691	0.48	0.28	0.33	0.38	0.4536	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.738958	NA	NA	0.471815	0.414545	NA	0.457	NA	3.9477184
1257	14	51371150	51371150	C	T	UTR3	ABHD12B	NM_181814:c.*66C>T,NM_001206673:c.*66C>T	NA	NA	UTR3	ENSG00000131969	ENST00000395752:c.*66C>T,ENST00000557345:c.*668C>T,ENST00000337334:c.*66C>T,ENST00000382029:c.*844C>T,ENST00000353130:c.*66C>T	NA	NA	NA	NA	14q22.1	NA	NA	NA	NA	rs11157781	0.3	0.3	0.28	0.283746	0.2028	0.4573	0.3876	0.1649	0.2751	0.21	0.47	0.38	0.18	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.742817	NA	NA	0.182904	0.138728	NA	0.188	NA	3.9476294
1257	22	38609950	38609950	G	A	intronic	MAFF	NA	NA	NA	intronic	ENSG00000185022	NA	NA	NA	NA	NA	22q13.1	NA	NA	Name=7	NA	rs2235264	0.44	0.44	0.414	0.363019	0.5308	0.5179	0.4971	0.1142	0.272	0.56	0.53	0.47	0.13	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.562088	NA	NA	0.521684	0.193642	NA	0.275	NA	3.947516
1257	3	18580572	18580572	C	A	intergenic	SATB1,KCNH8	dist=100307;dist=609445	NA	NA	ncRNA_exonic	ENSG00000236570	NA	NA	NA	NA	NA	3p24.3	NA	NA	NA	NA	rs1849591	0.15	0.15	0.131	0.155351	0.0527	0.2659	0.2651	0.1309	0.1022	0.05	0.28	0.19	0.1	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.394681	NA	NA	NA	NA	NA	0.138	NA	3.9473
1257	3	18580998	18580998	A	C	intergenic	SATB1,KCNH8	dist=100733;dist=609019	NA	NA	ncRNA_exonic	ENSG00000236570	NA	NA	NA	NA	NA	3p24.3	NA	NA	NA	NA	rs1887788	0.15	0.15	0.138	0.15615	0.0527	0.2659	0.2651	0.1331	0.1033	0.05	0.28	0.19	0.11	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.21206	NA	NA	NA	NA	ID=COSN166828;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.138	NA	3.9473
1257	4	876399	876399	T	C	intronic	GAK	NA	NA	NA	intronic	ENSG00000178950	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs3736086	0.04	0.04	0.028	0.0471246	0.0527	0.0615	0.0432	0.0159	0.0716	0.05	0.07	0.04	0.02	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.625569	NA	NA	NA	NA	NA	0.043	NA	3.9473
1257	7	11297830	11297830	C	T	intergenic	PHF14,THSD7A	dist=150454;dist=112232	NA	NA	ncRNA_exonic	ENSG00000226827	NA	NA	NA	NA	NA	7p21.3	NA	NA	NA	NA	rs76650346	0.04	0.04	0.038	0.0377396	0.0527	0.0208	0.0634	0.0257	0.0378	0.06	0.02	0.07	0.03	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.081122	NA	NA	NA	NA	NA	0.043	NA	3.9473
1257	7	11297930	11297930	A	G	intergenic	PHF14,THSD7A	dist=150554;dist=112132	NA	NA	ncRNA_exonic	ENSG00000226827	NA	NA	NA	NA	NA	7p21.3	NA	NA	NA	NA	rs75798507	0.05	0.05	0.039	0.0379393	0.0527	0.0208	0.0634	0.0265	0.0378	0.06	0.02	0.07	0.03	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.143808	NA	NA	NA	NA	NA	0.043	NA	3.9473
1257	7	129122570	129122570	C	G	intronic	STRIP2	NA	NA	NA	intronic	ENSG00000128578	NA	NA	NA	NA	NA	7q32.1	NA	NA	NA	NA	rs62489116	0.03	0.03	0.023	0.0195687	0.0527	NA	0.0331	0.003	0.0184	0.06	NA	0.04	0.01	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.117581	NA	NA	NA	NA	NA	0.087	NA	3.9473
1257	11	18993687	18993687	T	C	intergenic	MRGPRX1,MRGPRX2	dist=37138;dist=82316	NA	NA	ncRNA_exonic	ENSG00000254720	NA	NA	NA	NA	NA	11p15.1	NA	NA	NA	NA	rs116928985	0.03	0.03	0.017	0.023762	0.0527	0.001	0.0663	0.0038	0.0143	0.06	0.0017	0.04	0.0041	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.192395	NA	NA	NA	NA	NA	0.036	NA	3.9473
1257	14	20864720	20864720	G	A	intronic	TEP1	NA	NA	NA	intronic	ENSG00000129566	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs77610051	0.05	0.05	0.053	0.0583067	0.0527	NA	0.0274	0.1165	0.0675	0.06	NA	0.03	0.11	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.710263	NA	NA	NA	NA	NA	0.036	NA	3.9473
1257	19	55019045	55019045	C	T	intronic	LAIR2	NA	NA	NA	intronic	ENSG00000167618	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs140904924	0.04	0.04	0.029	0.048123	0.0527	0.0089	0.0504	0.0401	0.093	0.05	0.01	0.07	0.03	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.861883	NA	NA	NA	NA	NA	NA	NA	3.9473
1257	2	43625078	43625078	T	C	intronic	THADA	NA	NA	NA	intronic	ENSG00000115970	NA	NA	NA	NA	NA	2p21	NA	Name=GATA3_(SC-268),FOXA1_(C-20)	NA	NA	rs7605661	0.31	0.31	0.321	0.323083	0.3598	0.0337	0.2392	0.5537	0.3313	0.37	0.05	0.26	0.57	0.3346	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.037527	NA	NA	0.358345	0.477749	ID=COSN166077;OCCURENCE=1(breast)	0.377	NA	3.947255
1257	7	117867945	117867945	T	C	intronic	ANKRD7	NA	NA	NA	intronic	ENSG00000106013	NA	NA	NA	NA	NA	7q31.31	NA	NA	NA	NA	rs6961495	0.05	0.05	0.046	0.0457268	0.0139	0.0645	0.0461	0.0703	0.0256	0.01	0.07	0.07	0.07	0.0297	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.198103	NA	NA	0.009223	0.063918	NA	0.022	NA	3.947177
1257	19	51919140	51919140	G	A	intronic	SIGLEC10	NA	NA	NA	ncRNA_exonic	ENSG00000255441	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs3810101	0.2	0.2	0.176	0.260982	0.1909	0.2589	0.2075	0.3661	0.2311	0.15	0.18	0.17	0.3	0.1955	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.151856	NA	NA	NA	NA	NA	0.21	NA	3.9469333
1257	7	117874610	117874610	G	A	intronic	ANKRD7	NA	NA	NA	intronic	ENSG00000106013	NA	NA	NA	NA	NA	7q31.31	NA	NA	NA	NA	rs55759859	0.05	0.05	0.048	0.0457268	0.0139	0.0645	0.0461	0.0703	0.0256	0.01	0.07	0.07	0.07	0.0299	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.10068	NA	NA	0.009434	0.063601	NA	0.022	NA	3.946766
1257	19	3750622	3750622	A	C	exonic	TJP3	NA	synonymous SNV	TJP3:NM_001267560:exon21:c.A2700C:p.V900V,TJP3:NM_001267561:exon21:c.A2727C:p.V909V	exonic	ENSG00000105289	NA	synonymous SNV	ENSG00000105289:ENST00000262968:exon20:c.A2799C:p.V933V,ENSG00000105289:ENST00000539908:exon20:c.A2592C:p.V864V,ENSG00000105289:ENST00000587686:exon20:c.A2757C:p.V919V,ENSG00000105289:ENST00000382008:exon21:c.A2742C:p.V914V,ENSG00000105289:ENST00000541714:exon21:c.A2700C:p.V900V,ENSG00000105289:ENST00000589378:exon21:c.A2727C:p.V909V	NA	NA	19p13.3	NA	NA	NA	NA	rs1046271	0.59	0.59	0.553	0.596246	0.5636	0.6409	0.7075	0.5212	0.6063	0.54	0.68	0.69	0.51	0.6012	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.044187	NA	NA	0.555142	0.538811	NA	0.645	NA	3.9467246
1257	2	132580319	132580319	T	G	intergenic	C2orf27B,ANKRD30BL	dist=21085;dist=324845	NA	NA	intergenic	ENSG00000186825,ENSG00000229203	dist=21085;dist=7055	NA	NA	NA	NA	2q21.2	NA	Name=CTCF	NA	NA	rs12474476	0.39	0.39	0.346	0.436102	0.3867	0.3323	0.3718	0.5303	0.5123	0.38	0.33	0.36	0.5	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.633953	NA	NA	NA	NA	NA	0.014	NA	3.9466334
1257	11	2790019	2790019	G	A	intronic	KCNQ1	NA	NA	NA	intronic	ENSG00000053918	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs2075870	0.1	0.1	0.089	0.0908546	0.0229	0.2073	0.0331	0.0855	0.089	0.02	0.23	0.02	0.11	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.24556	NA	NA	0.030484	0.102601	NA	0.065	NA	3.946616
1257	5	156375420	156375420	C	T	intronic	TIMD4	NA	NA	NA	intronic	ENSG00000145850	NA	NA	NA	NA	NA	5q33.3	NA	NA	NA	NA	rs138454661	0.01	0.01	0.006	0.00599042	0.0209	NA	0.0086	NA	0.0031	0.02	NA	0.01	NA	0.0149	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.678217	NA	NA	0.017674	0.002043	NA	0.007	NA	3.946526
1257	4	81001940	81001940	T	C	intergenic	ANTXR2,PRDM8	dist=7463;dist=104484	NA	NA	ncRNA_exonic	ENSG00000236530	NA	NA	NA	NA	NA	4q21.21	NA	NA	NA	NA	rs2867698	0.08	0.08	0.083	0.113219	0.0537	0.0794	0.0461	0.1513	0.2055	0.05	0.06	0.04	0.17	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.667949	NA	NA	NA	NA	NA	0.101	NA	3.9463
1257	6	29896466	29896466	C	T	intergenic	HCG4B,HLA-A	dist=3038;dist=13781	NA	NA	ncRNA_intronic	ENSG00000230795	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs9259853	0.05	0.05	0.045	0.0507188	0.0537	0.0456	0.0331	0.0552	0.0593	0.05	0.05	0.04	0.05	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.682672	NA	NA	NA	NA	NA	0.022	NA	3.9463
1257	6	29896481	29896481	C	A	intergenic	HCG4B,HLA-A	dist=3053;dist=13766	NA	NA	ncRNA_intronic	ENSG00000230795	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs9259854	0.05	0.05	0.044	0.0507188	0.0537	0.0456	0.0331	0.0552	0.0593	0.05	0.05	0.03	0.05	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.121963	NA	NA	NA	NA	NA	0.022	NA	3.9463
1257	8	41585579	41585579	G	A	intronic	ANK1	NA	NA	NA	intronic	ENSG00000029534	NA	NA	NA	NA	NA	8p11.21	NA	NA	NA	NA	rs80118742	0.03	0.03	0.023	0.023762	0.0537	0.001	0.0504	0.0159	0.0082	0.06	NA	0.04	0.02	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.222681	NA	NA	NA	NA	NA	0.109	NA	3.9463
1257	10	49448329	49448329	A	G	intronic	FRMPD2	NA	NA	NA	intronic	ENSG00000170324	NA	NA	NA	NA	NA	10q11.22	NA	NA	NA	NA	rs7092864	0.13	0.13	0.128	0.133187	0.0537	0.0268	0.0634	0.3858	0.0327	0.05	0.01	0.08	0.4	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.133773	NA	NA	NA	NA	NA	0.196	NA	3.9463
1257	10	95134461	95134461	C	T	intronic	MYOF	NA	NA	NA	intronic	ENSG00000138119	NA	NA	NA	NA	NA	10q23.33	NA	NA	NA	NA	rs1886076	0.07	0.07	0.063	0.0585064	0.0537	NA	0.0461	0.1536	0.0041	0.05	NA	0.07	0.17	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.647373	NA	NA	NA	NA	NA	0.08	NA	3.9463
1257	11	117376111	117376111	A	C	intronic	DSCAML1	NA	NA	NA	intronic	ENSG00000177103	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs11216430	0.13	0.13	0.131	0.140375	0.0537	0.0843	0.1124	0.3169	0.0685	0.06	0.08	0.12	0.3	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.340285	NA	NA	NA	NA	NA	0.188	NA	3.9463
1257	14	95675883	95675883	C	G	intronic	CLMN	NA	NA	NA	intronic	ENSG00000165959	NA	NA	NA	NA	NA	14q32.13	NA	NA	NA	NA	rs17091921	0.07	0.07	0.083	0.0738818	0.0537	NA	0.0504	0.2035	0.0123	0.05	NA	0.04	0.18	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.519498	NA	NA	NA	NA	NA	0.13	NA	3.9463
1257	22	20128674	20128674	T	C	intronic	ZDHHC8	NA	NA	NA	intronic	ENSG00000099904	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs79425519	0.05	0.05	0.06	0.0623003	0.0537	0.0823	0.0115	0.0484	0.1053	0.06	0.07	0.01	0.04	NA	0.076	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.737668	NA	NA	NA	NA	NA	0.051	NA	3.9463
1257	3	186006487	186006487	G	T	intronic	DGKG	NA	NA	NA	intronic	ENSG00000058866	NA	NA	NA	NA	NA	3q27.3	NA	NA	NA	NA	rs79635827	0.01	0.01	0.006	0.00638978	0.0209	NA	0.0144	NA	0.001	0.02	NA	0.01	0.002	0.0127	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.122956	4.122956	NA	0.020116	0.004312	NA	NA	NA	3.946284
1257	9	33926692	33926692	G	A	intronic	UBAP2	NA	NA	NA	intronic	ENSG00000137073	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs2296364	0.03	0.03	0.023	0.0145767	0.0149	0.0536	NA	0.0008	0.0031	0.02	0.08	NA	0.002	0.0179	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.90254	NA	NA	0.02093	0.004766	NA	0.007	NA	3.94627
1257	2	17953850	17953850	A	G	intronic	GEN1	NA	NA	NA	intronic	ENSG00000163029,ENSG00000178295	NA	NA	NA	NA	NA	2p24.2	NA	NA	NA	NA	rs116651705	0.02	0.02	0.015	0.0205671	0.0209	NA	0.0259	0.0393	0.0123	0.03	NA	0.02	0.03	0.0156	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.032086	NA	NA	0.017378	0.029854	NA	0.014	NA	3.946122
1257	15	52539235	52539235	A	C	intronic	MYO5C	NA	NA	NA	intronic	ENSG00000128833	NA	NA	NA	NA	NA	15q21.2	NA	NA	NA	NA	rs41504447	0.08	0.08	0.077	0.0832668	0.0099	0.1071	0.0548	0.174	0.0317	0.01	0.11	0.05	0.18	0.0342	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.432542	1.432542	NA	0.009863	0.122001	NA	0.094	NA	3.946037
1257	10	1041981	1041981	C	G	intronic	GTPBP4	NA	NA	NA	intronic	ENSG00000107937	NA	NA	NA	NA	NA	10p15.3	NA	NA	NA	NA	rs148276311	0.01	0.01	0.008	0.0165735	0.0149	NA	0.0778	0.0015	0.0123	0.01	NA	0.05	0.002	0.0216	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.384005	1.384005	NA	0.017674	0.005674	NA	0.022	NA	3.945826
1257	1	7725284	7725284	C	A	intronic	CAMTA1	NA	NA	NA	intronic	ENSG00000171735	NA	NA	NA	NA	NA	1p36.23	Score=919;Name=V$MYCMAX_02	NA	NA	NA	rs4908671	0.23	0.23	0.227	0.228235	0.3678	0.0903	0.1988	0.1384	0.3691	0.39	0.1	0.24	0.14	0.3288	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.668448	NA	NA	0.357712	0.155005	NA	0.29	NA	3.945688
1257	1	43812075	43812075	G	A	intronic	MPL	NA	NA	NA	intronic	ENSG00000117400	NA	NA	NA	NA	NA	1p34.2	NA	NA	Name=3	NA	rs1760670	0.27	0.27	0.236	0.209665	0.3708	0.0843	0.3646	0.1944	0.0838	0.38	0.08	0.38	0.21	0.3032	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.596453	NA	NA	0.380349	0.229006	NA	0.348	NA	3.945651
1257	5	148618708	148618708	A	G	intronic	ABLIM3	NA	NA	NA	ncRNA_intronic	ENSG00000248647,ENSG00000253406	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs58203769	0.42	0.42	0.397	0.438498	0.3877	0.6399	0.3746	0.3298	0.4755	0.38	0.59	0.35	0.36	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.028271	NA	NA	NA	NA	NA	0.42	NA	3.9456333
1257	4	68938002	68938002	G	A	ncRNA_intronic	LOC550113	NA	NA	NA	ncRNA_intronic	ENSG00000248049	NA	NA	NA	NA	NA	4q13.2	NA	NA	NA	NA	rs12501405	0.23	0.23	0.22	0.242612	0.2674	0.1349	0.4179	0.2156	0.2403	0.27	0.13	0.37	0.2	0.2524	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.950156	NA	NA	0.201444	0.188238	NA	0.217	NA	3.9454226
1257	1	38018150	38018150	T	C	intronic	SNIP1	NA	NA	NA	intronic	ENSG00000163877	NA	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	rs72657793	0.14	0.14	0.016	0.0231629	0.0547	0.0089	0.0202	0.003	0.0348	0.18	0.09	0.09	0.18	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.793742	NA	NA	NA	NA	NA	0.036	NA	3.9453
1257	1	38023148	38023148	T	C	intronic	DNALI1	NA	NA	NA	intronic	ENSG00000163879	NA	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	rs72657795	0.03	0.03	0.017	0.0229633	0.0547	0.0089	0.0202	0.0023	0.0348	0.06	0.0035	0.02	0.0041	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.520376	NA	NA	NA	NA	NA	0.029	NA	3.9453
1257	1	38033217	38033217	G	C	intronic	GNL2	NA	NA	NA	intronic	ENSG00000134697	NA	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	rs41307894	0.03	0.03	0.013	0.0229633	0.0547	0.0089	0.0202	0.0023	0.0348	0.06	0.0035	0.02	0.0041	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.529863	NA	NA	NA	NA	NA	0.029	NA	3.9453
1257	1	41578864	41578864	G	A	intronic	SCMH1	NA	NA	NA	intronic	ENSG00000010803	NA	NA	NA	NA	NA	1p34.2	NA	NA	NA	NA	rs116263867	0.02	0.02	0.019	0.014976	0.0547	NA	0.0245	0.0008	0.002	0.05	NA	0.03	0.002	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.141331	NA	NA	NA	NA	NA	0.014	NA	3.9453
1257	1	204945665	204945665	G	A	intronic	NFASC	NA	NA	NA	intronic	ENSG00000163531	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs6668275	0.09	0.09	0.091	0.0826677	0.0547	0.0099	0.0403	0.2254	0.0235	0.06	0.01	0.05	0.26	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.080133	NA	NA	NA	NA	NA	0.116	NA	3.9453
1257	3	130947273	130947273	A	G	intronic	NEK11	NA	NA	NA	intronic	ENSG00000114670	NA	NA	NA	NA	NA	3q22.1	NA	NA	NA	NA	rs3737999	0.27	0.27	0.259	0.272564	0.0547	0.2966	0.2161	0.6014	0.0675	0.04	0.3	0.2	0.63	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.480785	NA	NA	NA	NA	NA	0.275	NA	3.9453
1257	6	25812069	25812069	A	G	intronic	SLC17A1	NA	NA	NA	intronic	ENSG00000124568	NA	NA	NA	NA	NA	6p22.2	NA	NA	NA	NA	rs10498730	0.02	0.02	0.025	0.0255591	0.0547	0.0109	0.0202	0.0023	0.046	0.05	0.01	0.01	0.002	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.329691	NA	NA	NA	NA	NA	0.036	NA	3.9453
1257	6	144184134	144184134	T	C	intronic	LTV1	NA	NA	NA	intronic	ENSG00000135521	NA	NA	NA	NA	NA	6q24.2	NA	NA	NA	NA	rs17073138	0.04	0.04	0.027	0.0505192	0.0547	0.002	0.0231	0.0696	0.09	0.05	0.01	0.03	0.07	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.703408	NA	NA	NA	NA	NA	0.043	NA	3.9453
1257	11	65412696	65412696	T	C	intronic	SIPA1	NA	NA	NA	intronic	ENSG00000213445	NA	NA	NA	NA	NA	11q13.1	NA	NA	NA	NA	rs72939178	0.03	0.03	0.022	0.0217652	0.0547	NA	0.0274	0.0053	0.0286	0.05	NA	0.03	0.01	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.041641	NA	NA	NA	NA	NA	0.065	NA	3.9453
1257	17	55918466	55918466	G	A	intronic	MRPS23	NA	NA	NA	intronic	ENSG00000181610	NA	NA	NA	NA	NA	17q22	NA	NA	NA	NA	rs112671856	0.02	0.02	0.024	0.0181709	0.0547	NA	0.0202	0.0015	0.0204	0.05	NA	0.02	0.002	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.656454	NA	NA	NA	NA	NA	0.014	NA	3.9453
1257	17	79027402	79027402	C	T	intronic	BAIAP2	NA	NA	NA	intronic	ENSG00000175866	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs117198875	0.04	0.04	0.019	0.0469249	0.0547	NA	0.1427	0.0015	0.0808	0.05	NA	0.14	0.0041	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.18968	NA	NA	NA	NA	NA	0.022	NA	3.9453
1257	20	60738070	60738070	C	T	intronic	SS18L1	NA	NA	NA	intronic	ENSG00000184402	NA	NA	NA	NA	NA	20q13.33	NA	NA	NA	NA	rs73309158	0.04	0.04	0.041	0.0587061	0.0547	0.003	0.0418	0.1112	0.0613	0.05	NA	0.02	0.09	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.511033	NA	NA	NA	NA	NA	0.065	NA	3.9453
1257	22	17402459	17402459	C	G	intergenic	HSFY1P1,GAB4	dist=92234;dist=40368	NA	NA	ncRNA_exonic	ENSG00000253460	NA	NA	NA	NA	NA	22q11.1	NA	NA	NA	NA	rs13433675	0.06	0.06	0.057	0.0587061	0.0547	NA	0.0533	0.1452	0.0102	0.05	NA	0.05	0.16	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.906502	NA	NA	NA	NA	NA	0.08	NA	3.9453
1257	3	183696402	183696402	A	G	exonic	ABCC5	NA	synonymous SNV	ABCC5:NM_005688:exon9:c.T1185C:p.A395A	exonic	ENSG00000114770	NA	synonymous SNV	ENSG00000114770:ENST00000265586:exon8:c.T1185C:p.A395A,ENSG00000114770:ENST00000334444:exon9:c.T1185C:p.A395A,ENSG00000114770:ENST00000437205:exon9:c.T1185C:p.A395A	NA	NA	3q27.1	NA	NA	NA	NA	rs1132776	0.68	0.68	0.694	0.676518	0.5746	0.8522	0.5879	0.7489	0.5654	0.56	0.86	0.57	0.72	0.5821	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.231788	NA	NA	0.564693	0.733661	NA	0.703	NA	3.9452736
1257	20	56099305	56099305	G	A	UTR5	CTCFL	NM_001269041:c.-44C>T,NM_001269044:c.-44C>T,NM_001269048:c.-44C>T,NM_001269052:c.-44C>T	NA	NA	UTR5	ENSG00000124092	ENST00000426658:c.-44C>T,ENST00000422109:c.-44C>T,ENST00000433949:c.-44C>T,ENST00000432255:c.-44C>T	NA	NA	NA	NA	20q13.31	NA	NA	Name=3	NA	rs11699220	0.37	0.37	0.32	0.344449	0.499	0.3988	0.3429	0.1097	0.4479	0.49	0.44	0.39	0.11	0.4268	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.766204	NA	NA	0.462371	0.156758	NA	0.348	NA	3.9451624
1257	5	169535522	169535522	T	C	exonic	FOXI1	NA	synonymous SNV	FOXI1:NM_012188:exon2:c.T1044C:p.Y348Y,FOXI1:NM_144769:exon2:c.T759C:p.Y253Y	exonic	ENSG00000168269	NA	synonymous SNV	ENSG00000168269:ENST00000306268:exon2:c.T1044C:p.Y348Y,ENSG00000168269:ENST00000449804:exon2:c.T759C:p.Y253Y	Score=329;Name=lod=29	NA	5q35.1	NA	NA	NA	NA	rs10063424	0.94	0.94	0.93	0.929513	0.9046	0.9851	0.9294	0.9017	0.9356	0.91	0.98	0.93	0.93	0.9089	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.205154	NA	NA	0.908023	0.906718	NA	0.855	NA	3.9451436
1258	17	42153562	42153562	G	C	UTR3	G6PC3	NM_138387:c.*151G>C	NA	NA	UTR3	ENSG00000141349	ENST00000269097:c.*151G>C,ENST00000588558:c.*1167G>C,ENST00000585361:c.*1029G>C,ENST00000590253:c.*485G>C	NA	NA	NA	NA	17q21.31	NA	NA	NA	NA	rs1046770	0.1	0.1	0.089	0.10024	0.2058	0.0149	0.1138	0.0386	0.1534	0.2	0.02	0.14	0.04	0.1826	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.232978	NA	NA	NA	NA	NA	0.043	NA	3.9449334
1258	7	107613379	107613379	G	A	intronic	LAMB1	NA	NA	NA	intronic	ENSG00000091136	NA	NA	NA	NA	NA	7q31.1	NA	Name=STAT3	NA	NA	rs2701034	0.66	0.66	0.666	0.665535	0.5298	0.751	0.5389	0.8132	0.6074	0.54	0.75	0.54	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.054846	NA	NA	0.525456	0.789017	NA	0.493	NA	3.944744
1258	9	135961787	135961787	A	G	ncRNA_exonic	CELP	NA	NA	NA	ncRNA_exonic	ENSG00000170827	NA	NA	NA	NA	NA	9q34.2	NA	NA	NA	NA	rs10901232	0.29	0.29	0.207	0.227636	0.4105	0.2113	0.4078	0.0961	0.1063	0.39	0.22	0.41	0.12	0.3118	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.780605	NA	NA	NA	NA	NA	0.232	NA	3.9443666
1258	3	16260775	16260775	C	G	intronic	GALNT15	NA	NA	NA	intronic	ENSG00000131386	NA	NA	NA	NA	NA	3p25.1	NA	NA	NA	NA	rs73818324	0.05	0.05	0.046	0.0589058	0.0557	0.002	0.0994	0.0953	0.0429	0.05	0.0017	0.09	0.09	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.782034	3.782034	NA	NA	NA	NA	0.058	NA	3.9443
1258	9	500979	500979	T	C	intronic	KANK1	NA	NA	NA	intronic	ENSG00000107104	NA	NA	NA	NA	NA	9p24.3	NA	NA	NA	NA	rs10118798	0.2	0.2	0.24	0.252396	0.0557	0.003	0.0951	0.7685	0.1258	0.05	0.01	0.1	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.466822	NA	NA	NA	NA	NA	0.283	NA	3.9443
1258	10	82185828	82185828	G	A	intronic	FAM213A	NA	NA	NA	intronic	ENSG00000122378	NA	NA	NA	NA	NA	10q23.1	NA	NA	NA	NA	rs77000305	0.07	0.07	0.066	0.0752796	0.0557	0.001	0.0432	0.1906	0.0389	0.06	0.0017	0.05	0.17	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.899015	NA	NA	NA	NA	NA	0.116	NA	3.9443
1258	11	18722371	18722371	A	T	intronic	TMEM86A	NA	NA	NA	intronic	ENSG00000151117	NA	NA	NA	NA	NA	11p15.1	NA	NA	NA	NA	rs74441348	0.03	0.03	0.027	0.0159744	0.0557	NA	0.0303	NA	0.0031	0.06	NA	0.04	NA	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.113861	NA	NA	NA	NA	NA	0.116	NA	3.9443
1258	11	27395447	27395447	C	T	intronic	LGR4	NA	NA	NA	intronic	ENSG00000205213	NA	NA	NA	NA	NA	11p14.1	NA	NA	NA	NA	rs77328098	0.03	0.03	0.034	0.0245607	0.0557	0.002	0.0389	0.0234	0.0072	0.06	NA	0.05	0.03	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.148169	NA	NA	NA	NA	NA	0.029	NA	3.9443
1258	11	27401703	27401703	G	A	intronic	LGR4	NA	NA	NA	intronic	ENSG00000205213	NA	NA	NA	NA	NA	11p14.1	NA	NA	NA	NA	rs78698326	0.03	0.03	0.018	0.0245607	0.0557	0.002	0.0389	0.0234	0.0072	0.06	NA	0.05	0.03	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.14826	NA	NA	NA	NA	NA	0.029	NA	3.9443
1258	17	3928080	3928080	G	A	intronic	ZZEF1	NA	NA	NA	intronic	ENSG00000074755	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs16953649	0.04	0.04	0.032	0.0313498	0.0557	0.003	0.0418	0.025	0.0368	0.07	0.01	0.05	0.04	NA	0.076	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.793158	NA	NA	NA	NA	NA	0.109	NA	3.9443
1258	14	99876505	99876505	A	G	UTR3	SETD3	NM_199123:c.*6T>C	NA	NA	UTR3	ENSG00000183576	ENST00000329331:c.*6T>C	NA	NA	NA	NA	14q32.2	NA	NA	Name=3	NA	rs1047351	0.56	0.56	0.529	0.557109	0.4483	0.5665	0.6009	0.6354	0.5225	0.45	0.59	0.62	0.64	0.5074	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.164322	NA	NA	0.433488	0.625511	NA	0.507	NA	3.9441454
1258	19	39787556	39787556	C	G	intronic	IFNL1	NA	NA	NA	intronic	ENSG00000182393	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs56016435	0.03	0.03	0.027	0.0251597	0.0199	NA	0.0173	0.053	0.0245	0.02	NA	0.03	0.07	0.0188	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.29163	NA	NA	0.017674	0.054698	NA	0.087	NA	3.943626
1258	19	5867748	5867748	G	T	UTR5	FUT5	NM_002034:c.-12C>A	NA	NA	exonic	ENSG00000267740	NA	unknown	UNKNOWN	NA	NA	19p13.3	NA	Name=CTCF,CTCFL_(SC-98982)	NA	NA	rs778971	0.62	0.62	0.583	0.638778	0.5577	0.8065	0.6556	0.4652	0.772	0.55	0.81	0.66	0.47	0.6098	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.393401	NA	NA	0.555776	0.493642	NA	0.457	NA	3.9433907
1258	5	169461399	169461399	G	A	intronic	DOCK2	NA	NA	NA	intronic	ENSG00000134516	NA	NA	NA	NA	NA	5q35.1	NA	NA	Name=4	NA	rs3763047	0.45	0.45	0.493	0.499201	0.332	0.6052	0.3127	0.643	0.5	0.33	0.56	0.33	0.6	0.3921	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.733976	NA	NA	0.332558	0.600091	NA	0.464	NA	3.943342
1258	4	70267499	70267499	G	A	intergenic	UGT2B28,UGT2B4	dist=106731;dist=78384	NA	NA	ncRNA_intronic	ENSG00000215110	NA	NA	NA	NA	NA	4q13.2	NA	NA	NA	NA	rs114119206	0.09	0.09	0.074	0.0896565	0.0567	0.2133	0.0922	0.003	0.1115	0.06	0.22	0.07	0.01	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.520129	NA	NA	NA	NA	NA	0.051	NA	3.9433
1258	11	6088738	6088738	C	T	intergenic	OR56A1,OR56B4	dist=39767;dist=40271	NA	NA	ncRNA_exonic	ENSG00000234895	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs59722231	0.16	0.16	0.153	0.174521	0.0567	0.122	0.1354	0.3752	0.1063	0.06	0.15	0.12	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.146812	NA	NA	NA	NA	NA	0.217	NA	3.9433
1258	20	22866518	22866518	G	A	intergenic	FOXA2,SSTR4	dist=300417;dist=149539	NA	NA	ncRNA_exonic	ENSG00000213882	NA	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	rs4815151	0.07	0.07	0.059	0.0942492	0.0567	0.1389	0.1326	0.0023	0.184	0.06	0.12	0.12	0.01	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.186295	NA	NA	NA	NA	NA	0.029	NA	3.9433
1258	1	32502430	32502430	T	A	intronic	KHDRBS1	NA	NA	NA	intronic	ENSG00000121774	NA	NA	NA	NA	NA	1p35.1	NA	NA	NA	NA	rs3738002	0.11	0.11	0.09	0.167732	0.0567	0.2371	0.2104	0.0779	0.3016	0.06	0.23	0.12	0.06	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.935826	NA	NA	NA	NA	NA	0.196	NA	3.9433
1258	1	32557673	32557673	C	T	intronic	TMEM39B	NA	NA	NA	intronic	ENSG00000121775	NA	NA	NA	NA	NA	1p35.1	NA	NA	NA	NA	rs744454	0.1	0.1	0.087	0.145367	0.0567	0.2351	0.1988	0.0159	0.2812	0.06	0.23	0.1	0.01	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.021286	NA	NA	NA	NA	NA	0.13	NA	3.9433
1258	1	32623108	32623108	A	G	intronic	KPNA6	NA	NA	NA	intronic	ENSG00000025800	NA	NA	NA	NA	NA	1p35.1	NA	NA	NA	NA	rs41311207	0.11	0.11	0.084	0.163538	0.0567	0.2321	0.2104	0.0779	0.2853	0.06	0.22	0.12	0.06	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.281628	NA	NA	NA	NA	NA	0.145	NA	3.9433
1258	1	32672784	32672784	G	C	intronic	IQCC	NA	NA	NA	intronic	ENSG00000160051	NA	NA	NA	NA	NA	1p35.1	NA	NA	NA	NA	rs56663136	0.14	0.14	0.136	0.209265	0.0567	0.2302	0.232	0.2466	0.2781	0.05	0.2	0.13	0.23	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.433165	2.433165	NA	NA	NA	NA	NA	NA	3.9433
1258	1	32672785	32672785	A	T	intronic	IQCC	NA	NA	NA	intronic	ENSG00000160051	NA	NA	NA	NA	NA	1p35.1	NA	NA	NA	NA	rs60559680	0.14	0.14	0.132	0.209265	0.0567	0.2302	0.232	0.2466	0.2781	0.05	0.2	0.13	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.763322	2.763322	NA	NA	NA	NA	NA	NA	3.9433
1258	1	32678506	32678506	C	T	intronic	DCDC2B	NA	NA	NA	intronic	ENSG00000222046	NA	NA	NA	NA	NA	1p35.1	NA	NA	NA	NA	rs58238092	0.17	0.17	0.153	0.227436	0.0567	0.2302	0.2378	0.3056	0.2873	0.06	0.21	0.15	0.3	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.961634	NA	NA	NA	NA	NA	0.188	NA	3.9433
1258	1	220965086	220965086	G	C	intronic	MARC1	NA	NA	NA	intronic	ENSG00000186205	NA	NA	NA	NA	NA	1q41	NA	NA	NA	NA	rs3738177	0.21	0.21	0.203	0.229433	0.0567	0.3065	0.2147	0.3555	0.1677	0.05	0.31	0.19	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.107471	NA	NA	NA	NA	NA	0.21	NA	3.9433
1258	6	90048113	90048113	T	C	intronic	UBE2J1	NA	NA	NA	intronic	ENSG00000198833	NA	NA	NA	NA	NA	6q15	NA	NA	NA	NA	rs74949641	0.06	0.06	0.068	0.0646965	0.0567	NA	0.0476	0.1271	0.0675	0.06	NA	0.06	0.14	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.335763	1.335763	NA	NA	NA	NA	0.065	NA	3.9433
1258	10	81318551	81318551	C	T	intronic	SFTPA2	NA	NA	NA	intronic	ENSG00000185303	NA	NA	NA	NA	NA	10q22.3	NA	NA	NA	NA	rs17881317	0.03	0.03	0.026	0.0277556	0.0567	0.006	0.0216	0.0363	0.0133	0.05	0.01	0.02	0.03	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.879422	NA	NA	NA	NA	NA	0.022	NA	3.9433
1258	19	7970913	7970913	C	A	intronic	MAP2K7	NA	NA	NA	intronic	ENSG00000076984	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs41284496	0.03	0.03	0.03	0.0191693	0.0567	0.001	0.0346	0.0023	0.0112	0.06	0.0017	0.04	0.01	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.046428	NA	NA	NA	NA	NA	0.014	NA	3.9433
1258	19	40096089	40096089	T	C	intronic	LGALS13	NA	NA	NA	intronic	ENSG00000105198	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs2233707	0.02	0.02	0.013	0.0189696	0.0567	NA	0.0216	0.0008	0.0225	0.06	NA	0.02	NA	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.653269	NA	NA	NA	NA	NA	0.007	NA	3.9433
1258	19	55801050	55801050	G	A	intronic	BRSK1	NA	NA	NA	intronic	ENSG00000160469	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs78811144	0.05	0.05	0.032	0.0435304	0.0567	0.0536	0.085	0.0053	0.0419	0.06	0.05	0.07	0.02	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.815855	NA	NA	NA	NA	NA	0.014	NA	3.9433
1258	7	77708129	77708129	G	A	intronic	MAGI2	NA	NA	NA	intronic	ENSG00000187391	NA	NA	NA	NA	NA	7q21.11	NA	NA	NA	NA	rs112512171	NA	NA	NA	0.0171725	0.0467	0.006	0.0231	0.0038	0.0123	NA	NA	NA	NA	0.0101	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.06891	NA	NA	NA	NA	NA	NA	NA	3.9432
1258	6	30890206	30890206	T	C	intronic	VARS2	NA	NA	NA	intronic	ENSG00000137411	NA	NA	NA	NA	NA	6p21.33	NA	NA	Name=15	NA	rs887381	0.24	0.24	0.231	0.221645	0.3559	0.247	0.2075	0.0968	0.2362	0.35	0.28	0.2	0.06	0.3246	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.879974	NA	NA	0.376477	0.145557	NA	0.261	NA	3.943023
1258	20	25027331	25027331	G	A	intronic	ACSS1	NA	NA	NA	UTR3	ENSG00000154930	ENST00000376726:c.*147C>T	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	rs6132792	0.34	0.34	0.33	0.370807	0.2237	0.2312	0.4121	0.6082	0.316	0.23	0.22	0.37	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.087104	NA	NA	NA	NA	NA	0.449	NA	3.9429667
1258	12	52863709	52863709	C	T	intronic	KRT6C	NA	NA	NA	intronic	ENSG00000170465	NA	NA	NA	NA	NA	12q13.13	NA	Name=FOXA1_(C-20)	NA	NA	rs452600	0.33	0.33	0.309	0.2502	0.3628	0.4812	0.2651	0.0242	0.1912	0.36	0.56	0.32	0.04	0.3271	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.213046	NA	NA	0.367442	0.07172	NA	0.362	NA	3.942658
1258	1	151847193	151847193	A	C	UTR3	THEM4	NM_053055:c.*171T>G	NA	NA	UTR3	ENSG00000159445	ENST00000368814:c.*171T>G,ENST00000471464:c.*802T>G	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs11204907	0.26	0.26	0.21	0.183706	0.3907	0.2679	0.1988	0.0098	0.1084	0.4	0.31	0.23	0.01	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.378159	1.378159	NA	NA	NA	NA	0.167	NA	3.9426334
1258	14	79454519	79454519	G	C	intronic	NRXN3	NA	NA	NA	intronic	ENSG00000021645	NA	NA	NA	NA	NA	14q31.1	NA	Name=NANOG_(SC-33759)	NA	NA	rs154325	0.42	0.42	0.416	0.444888	0.33	0.1994	0.5403	0.7579	0.3252	0.34	0.17	0.5	0.77	0.3699	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.119515	NA	NA	0.357558	0.682025	NA	0.471	NA	3.942542
1258	1	201454385	201454385	C	A	intronic	CSRP1	NA	NA	NA	intronic	ENSG00000159176	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs41304273	0.04	0.04	0.042	0.0555112	0.0149	NA	0.0375	0.177	0.0031	0.01	NA	0.02	0.14	0.0271	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.977842	NA	NA	0.015581	0.153881	NA	0.043	NA	3.942419
1258	1	230845555	230845555	G	A	intronic	AGT	NA	NA	NA	intronic	ENSG00000135744	NA	NA	NA	NA	NA	1q42.2	NA	NA	NA	NA	rs11568054	0.03	0.03	0.024	0.0169728	0.0577	0.001	0.0245	0.0038	0.0041	0.07	NA	0.03	0.0041	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.380358	NA	NA	NA	NA	NA	0.029	NA	3.9423
1258	2	7160460	7160460	C	T	intronic	RNF144A	NA	NA	NA	intronic	ENSG00000151692	NA	NA	NA	NA	NA	2p25.1	NA	NA	NA	NA	rs72781798	0.03	0.03	0.033	0.038738	0.0577	0.002	0.0173	0.0408	0.0695	0.06	0.0017	0.02	0.04	NA	0.087	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.836111	NA	NA	NA	NA	NA	0.065	NA	3.9423
1258	7	157936719	157936719	C	T	intronic	PTPRN2	NA	NA	NA	intronic	ENSG00000155093	NA	NA	NA	NA	NA	7q36.3	NA	NA	NA	NA	rs73173608	0.07	0.07	0.076	0.0712859	0.0577	0.0129	0.0951	0.1422	0.0327	0.06	0.02	0.09	0.14	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.487781	NA	NA	NA	NA	NA	0.109	NA	3.9423
1258	9	73254184	73254184	C	T	intronic	TRPM3	NA	NA	NA	intronic	ENSG00000083067	NA	NA	NA	NA	NA	9q21.12	NA	NA	NA	NA	rs73451732	0.08	0.08	0.104	0.0804712	0.0577	0.005	0.0476	0.1997	0.044	0.06	0.01	0.04	0.24	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.890768	NA	NA	NA	NA	NA	0.101	NA	3.9423
1258	10	102050344	102050344	A	T	intronic	PKD2L1	NA	NA	NA	intronic	ENSG00000107593	NA	NA	NA	NA	NA	10q24.31	NA	NA	NA	NA	rs6584357	0.08	0.08	0.075	0.0974441	0.0577	0.0605	0.0634	0.1747	0.0961	0.06	0.07	0.07	0.13	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.721435	NA	NA	NA	NA	NA	0.058	NA	3.9423
1258	10	102052884	102052884	C	T	intronic	PKD2L1	NA	NA	NA	intronic	ENSG00000107593	NA	NA	NA	NA	NA	10q24.31	NA	NA	NA	NA	rs35662118	0.07	0.07	0.062	0.0840655	0.0577	0.0605	0.0591	0.1248	0.0982	0.06	0.07	0.07	0.1	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.232242	NA	NA	NA	NA	NA	0.051	NA	3.9423
1258	14	20857600	20857600	A	G	intronic	TEP1	NA	NA	NA	intronic	ENSG00000129566	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs111751048	0.03	0.03	0.033	0.04373	0.0577	NA	0.0288	0.0484	0.0787	0.06	NA	0.03	0.03	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.412447	NA	NA	NA	NA	NA	0.014	NA	3.9423
1258	1	151340830	151340830	A	G	intronic	SELENBP1	NA	NA	NA	intronic	ENSG00000143416	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs72710113	0.01	0.01	0.006	0.00998403	0.0249	0.001	0.0115	0.0091	0.0041	0.02	NA	0.02	0.002	0.0142	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.287847	NA	NA	0.018605	0.009305	NA	0.051	NA	3.942295
1258	19	38077474	38077474	G	A	ncRNA_exonic	LOC100507433	NA	NA	NA	ncRNA_exonic	ENSG00000267470	NA	NA	NA	NA	NA	19q13.12	NA	NA	NA	NA	rs2306201	0.19	0.19	0.174	0.171925	0.3618	0.0288	0.2608	0.0613	0.2106	0.37	0.04	0.26	0.05	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.840952	2.840952	NA	0.362665	0.109827	NA	0.29	NA	3.9422016
1258	2	101644496	101644496	C	T	intronic	TBC1D8	NA	NA	NA	intronic	ENSG00000204634	NA	NA	NA	NA	NA	2q11.2	NA	NA	NA	NA	rs62152952	0.01	0.01	0.006	0.00778754	0.0219	NA	0.0202	0.0008	0.002	0.02	NA	0.02	0.002	0.0152	0.021	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.724861	NA	NA	0.020833	0.00221	NA	0.007	NA	3.942067
1258	19	12088164	12088164	C	T	intronic	ZNF763	NA	NA	NA	intronic	ENSG00000197054,ENSG00000267179	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs72988671	0.02	0.02	0.015	0.019369	0.0229	0.006	0.0144	0.0257	0.0245	0.02	0.01	0.02	0.03	0.0167	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.942697	NA	NA	0.018376	0.026172	NA	0.014	NA	3.942024
1258	19	48386800	48386800	C	T	intronic	SULT2A1	NA	NA	NA	intronic	ENSG00000105398	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs3936308	0.04	0.04	0.046	0.0397364	0.0209	NA	0.0159	0.1233	0.0041	0.02	NA	0.02	0.14	0.0211	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.428276	NA	NA	0.016047	0.113482	NA	0.058	NA	3.941953
1258	16	15838940	15838940	G	C	intronic	MYH11	NA	NA	NA	intronic	ENSG00000133392	NA	NA	NA	NA	NA	16p13.11	NA	Name=CTCF,CTCF_(SC-5916)	Name=8	NA	rs2384934	0.84	0.84	0.825	0.871805	0.666	0.999	0.7954	0.9682	0.8763	0.67	1	0.75	0.96	0.7414	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.624523	NA	NA	0.650849	0.923305	NA	0.819	NA	3.941751
1258	17	1585405	1585405	T	G	intronic	PRPF8	NA	NA	NA	intronic	ENSG00000174231	NA	NA	NA	NA	NA	17p13.3	NA	NA	NA	NA	rs72820383	0.01	0.01	0.011	0.00579073	0.0209	NA	0.0058	NA	0.0041	0.02	NA	0.01	NA	0.0139	0.024	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.149981	NA	NA	0.023605	0.00522	NA	0.007	NA	3.941595
1258	7	6963564	6963564	T	C	intergenic	CCZ1B,LOC100131257	dist=97638;dist=151837	NA	NA	ncRNA_intronic	ENSG00000226943	NA	NA	NA	NA	NA	7p22.1	NA	NA	NA	NA	rs186185190	0.04	0.04	NA	0.0365415	0.0586	NA	0.1268	0.0045	0.0307	0.06	NA	0.1	0.01	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.104856	NA	NA	NA	NA	NA	0.014	NA	3.9414
1258	5	140821428	140821428	C	T	intronic	PCDHGA1,PCDHGA10,PCDHGA11,PCDHGA12,PCDHGA2,PCDHGA3,PCDHGA4,PCDHGA5,PCDHGA6,PCDHGA7,PCDHGA8,PCDHGA9,PCDHGB1,PCDHGB2,PCDHGB3,PCDHGB4,PCDHGB5,PCDHGB6,PCDHGB7	NA	NA	NA	intronic	ENSG00000081853,ENSG00000204956,ENSG00000253159,ENSG00000253305,ENSG00000253485,ENSG00000253537,ENSG00000253731,ENSG00000253767,ENSG00000253846,ENSG00000253873,ENSG00000253910,ENSG00000253953,ENSG00000254122,ENSG00000254221,ENSG00000254245,ENSG00000261934,ENSG00000262209,ENSG00000262576	NA	NA	NA	NA	NA	5q31.3	NA	NA	NA	NA	rs3805696	0.12	0.12	0.124	0.126597	0.0586	0.1181	0.1513	0.171	0.1278	0.07	0.12	0.13	0.18	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.011857	NA	NA	NA	NA	NA	0.101	NA	3.9414
1258	10	97442308	97442308	T	C	intronic	TCTN3	NA	NA	NA	intronic	ENSG00000119977	NA	NA	NA	NA	NA	10q24.1	NA	NA	NA	NA	rs3818833	0.07	0.07	0.066	0.0692891	0.0586	0.0397	0.0692	0.0908	0.0818	0.05	0.05	0.09	0.09	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.562646	NA	NA	NA	NA	NA	0.058	NA	3.9414
1258	11	32437841	32437841	A	C	intronic	WT1	NA	NA	NA	intronic	ENSG00000184937	NA	NA	NA	NA	NA	11p13	NA	NA	NA	NA	rs5030212	0.03	0.03	0.02	0.0181709	0.0586	0.001	0.0317	0.0015	0.0072	0.06	0.0017	0.03	0.0041	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.015437	NA	NA	NA	NA	NA	0.022	NA	3.9414
1258	14	20858715	20858715	A	G	intronic	TEP1	NA	NA	NA	intronic	ENSG00000129566	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs113176194	0.04	0.04	0.041	0.0577077	0.0586	NA	0.0346	0.0976	0.0787	0.06	NA	0.04	0.07	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.254413	NA	NA	NA	NA	NA	0.029	NA	3.9414
1258	16	55905481	55905481	A	G	intronic	CES5A	NA	NA	NA	intronic	ENSG00000159398	NA	NA	NA	NA	NA	16q12.2	NA	NA	NA	NA	rs55703803	0.03	0.03	0.019	0.0173722	0.0586	NA	0.0187	0.003	0.0112	0.06	NA	0.01	0.01	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.79493	NA	NA	NA	NA	NA	0.072	NA	3.9414
1258	12	124856660	124856660	T	A	exonic	NCOR2	NA	synonymous SNV	NCOR2:NM_001077261:exon21:c.A2661T:p.T887T,NCOR2:NM_001206654:exon21:c.A2661T:p.T887T,NCOR2:NM_006312:exon22:c.A2715T:p.T905T	exonic	ENSG00000196498	NA	synonymous SNV	ENSG00000196498:ENST00000397355:exon20:c.A2664T:p.T888T,ENSG00000196498:ENST00000404121:exon20:c.A1374T:p.T458T,ENSG00000196498:ENST00000404621:exon20:c.A2661T:p.T887T,ENSG00000196498:ENST00000405201:exon20:c.A2715T:p.T905T,ENSG00000196498:ENST00000429285:exon20:c.A2661T:p.T887T,ENSG00000196498:ENST00000356219:exon21:c.A2715T:p.T905T,ENSG00000196498:ENST00000458234:exon22:c.A2715T:p.T905T	NA	NA	12q24.31	NA	NA	NA	NA	rs3741513	0.39	0.39	0.339	0.385184	0.5805	0.1677	0.5893	0.2549	0.4397	0.56	0.15	0.59	0.24	0.5358	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.560512	NA	NA	0.608974	0.361058	NA	0.319	NA	3.9413926
1258	9	137623303	137623303	G	A	intronic	COL5A1	NA	NA	NA	intronic	ENSG00000130635	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs76548907	0.03	0.03	0.038	0.0389377	0.0159	0.002	0.0187	0.0961	0.0378	0.01	0.0017	0.02	0.11	0.0248	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.496882	NA	NA	0.018023	0.078983	NA	0.014	NA	3.941277
1258	22	32546946	32546946	C	T	intronic	C22orf42	NA	NA	NA	intronic	ENSG00000205856	NA	NA	NA	NA	NA	22q12.3	NA	NA	Name=5	NA	rs2019949	0.39	0.39	0.41	0.440695	0.3549	0.1458	0.255	0.8737	0.3793	0.35	0.13	0.28	0.85	0.3556	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.856193	NA	NA	0.348721	0.790513	NA	0.413	NA	3.940779
1258	3	13544355	13544355	C	T	intronic	HDAC11	NA	NA	NA	intronic	ENSG00000163517	NA	NA	NA	NA	NA	3p25.1	NA	NA	NA	NA	rs59204296	0.02	0.02	0.019	0.01877	0.0219	NA	0.0101	0.0469	0.0031	0.02	NA	0.02	0.06	0.0169	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.236943	NA	NA	0.020581	0.034271	NA	0.029	NA	3.940619
1258	12	2077098	2077098	C	A	intronic	DCP1B	NA	NA	NA	intronic	ENSG00000151065	NA	NA	NA	NA	NA	12p13.33	NA	NA	NA	NA	rs77559005	0.01	0.01	0.005	0.00698882	0.0258	NA	0.0058	0.0008	0.0041	0.02	NA	0.01	0.002	0.0153	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.904436	2.904436	NA	0.018286	0.002497	NA	NA	NA	3.940614
1258	1	118629738	118629738	G	A	intronic	SPAG17	NA	NA	NA	intronic	ENSG00000155761	NA	NA	NA	NA	NA	1p12	NA	NA	NA	NA	rs12142679	0.1	0.1	0.093	0.120807	0.0596	0.2847	0.0447	0.034	0.1861	0.06	0.24	0.04	0.03	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.210073	NA	NA	NA	NA	NA	0.029	NA	3.9404
1258	2	207451965	207451965	C	A	intronic	ADAM23	NA	NA	NA	intronic	ENSG00000114948	NA	NA	NA	NA	NA	2q33.3	NA	NA	NA	NA	rs76058025	0.03	0.03	0.026	0.0327476	0.0596	0.002	0.0403	0.0061	0.0675	0.06	0.0017	0.05	0.01	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.190377	NA	NA	NA	NA	NA	0.029	NA	3.9404
1258	6	29798083	29798083	C	T	intronic	HLA-G	NA	NA	NA	intronic	ENSG00000204632	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs114038308	0.06	0.06	0.038	0.0876597	0.0596	0.1954	0.0375	0.0008	0.1585	0.06	0.15	0.03	0.002	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.824965	NA	NA	NA	NA	NA	0.094	NA	3.9404
1258	6	29896272	29896272	G	A	intergenic	HCG4B,HLA-A	dist=2844;dist=13975	NA	NA	ncRNA_exonic	ENSG00000230795	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs9259851	0.05	0.05	0.056	0.0607029	0.0596	0.0675	0.0389	0.0613	0.0695	0.05	0.06	0.04	0.05	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.601213	NA	NA	NA	NA	NA	0.014	NA	3.9404
1258	6	152615042	152615042	G	T	intronic	SYNE1	NA	NA	NA	intronic	ENSG00000131018	NA	NA	NA	NA	NA	6q25.2	NA	NA	NA	NA	rs73007780	0.05	0.05	0.039	0.0473243	0.0596	0.0724	0.0634	0.0083	0.0501	0.05	0.07	0.06	0.01	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.487322	NA	NA	NA	NA	ID=COSN167910;OCCURENCE=2(large_intestine)	0.087	NA	3.9404
1258	6	160224203	160224203	A	G	intronic	PNLDC1	NA	NA	NA	intronic	ENSG00000146453	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs56130537	0.03	0.03	0.024	0.0197684	0.0596	NA	0.0274	0.0076	0.0102	0.06	NA	0.04	0.02	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.266376	NA	NA	NA	NA	NA	0.014	NA	3.9404
1258	8	51442650	51442650	A	T	intronic	SNTG1	NA	NA	NA	intronic	ENSG00000147481	NA	NA	NA	NA	NA	8q11.21	NA	NA	NA	NA	rs73585148	0.12	0.12	0.143	0.14996	0.0596	0.0317	0.0461	0.3956	0.1063	0.06	0.03	0.06	0.37	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.053104	NA	NA	NA	NA	NA	0.138	NA	3.9404
1258	8	95868932	95868932	C	G	intronic	INTS8	NA	NA	NA	intronic	ENSG00000164941	NA	NA	NA	NA	NA	8q22.1	NA	NA	NA	NA	rs2467678	0.05	0.05	0.045	0.0511182	0.0596	0.1101	0.0173	0.0008	0.0736	0.06	0.13	0.01	0.002	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.31792	2.31792	NA	NA	NA	NA	0.029	NA	3.9404
1258	14	20849940	20849940	G	A	intronic	TEP1	NA	NA	NA	intronic	ENSG00000129566	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs12436041	0.03	0.03	0.028	0.0319489	0.0596	NA	0.0317	0.003	0.0757	0.07	NA	0.03	NA	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.043275	NA	NA	NA	NA	NA	0.014	NA	3.9404
1258	14	105695364	105695364	C	T	intronic	BRF1	NA	NA	NA	intronic	ENSG00000185024	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs77453682	0.03	0.03	0.027	0.0191693	0.0596	0.002	0.0331	0.003	0.0072	0.06	0.0035	0.02	0.002	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.842793	NA	NA	NA	NA	NA	0.014	NA	3.9404
1258	17	26667226	26667226	C	T	intronic	TNFAIP1	NA	NA	NA	intronic	ENSG00000109079	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs2234116	0.03	0.03	0.022	0.0199681	0.0596	NA	0.0346	0.0023	0.0133	0.06	NA	0.04	0.002	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.547048	NA	NA	NA	NA	NA	0.007	NA	3.9404
1258	12	21614897	21614897	C	T	intronic	PYROXD1	NA	NA	NA	intronic	ENSG00000121350	NA	NA	NA	NA	NA	12p12.1	NA	NA	NA	NA	rs148210261	0.01	0.01	0.008	0.0061901	0.0258	NA	0.0029	0.0023	NA	0.03	NA	NA	0.01	0.0161	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.04215	NA	NA	0.018032	0.003404	NA	0.007	NA	3.940068
1258	7	86820398	86820398	C	G	intronic	DMTF1	NA	NA	NA	intronic	ENSG00000135164	NA	NA	NA	NA	NA	7q21.12	NA	NA	NA	NA	rs73208503	0.04	0.04	0.045	0.0347444	0.0268	0.0655	0.0115	0.0492	0.0082	0.03	0.06	0.01	0.05	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.117686	NA	NA	0.033627	0.049133	NA	0.123	NA	3.939573
1258	1	118550594	118550594	C	A	intronic	SPAG17	NA	NA	NA	intronic	ENSG00000155761	NA	NA	NA	NA	NA	1p12	NA	NA	NA	NA	rs10923465	0.1	0.1	0.097	0.11242	0.0606	0.3085	0.0288	0.0008	0.1738	0.06	0.29	0.03	0.002	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.129883	NA	NA	NA	NA	NA	0.029	NA	3.9394
1258	5	147503318	147503318	A	G	intronic	SPINK5	NA	NA	NA	intronic	ENSG00000133710	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs58409150	0.11	0.11	0.096	0.125599	0.0606	0.246	0.0461	0.0719	0.1973	0.06	0.25	0.06	0.05	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.149533	NA	NA	NA	NA	NA	0.087	NA	3.9394
1258	11	6079028	6079028	C	T	intergenic	OR56A1,OR56B4	dist=30057;dist=49981	NA	NA	ncRNA_exonic	ENSG00000262980	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs61735897	0.05	0.05	0.048	0.0461262	0.0606	0.0109	0.0187	0.0688	0.0562	0.07	0.01	0.03	0.09	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.977288	NA	0.13	NA	NA	NA	0.051	NA	3.9394
1258	12	124355944	124355944	C	T	intronic	DNAH10	NA	NA	NA	intronic	ENSG00000197653	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs117975072	0.03	0.03	0.021	0.0211661	0.0606	0.001	0.0346	0.0008	0.0194	0.06	NA	0.04	0.002	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.774995	NA	NA	NA	NA	NA	0.022	NA	3.9394
1258	14	56120178	56120178	T	C	intronic	KTN1	NA	NA	NA	intronic	ENSG00000126777	NA	NA	NA	NA	NA	14q22.3	NA	NA	NA	NA	rs3736876	0.04	0.04	0.028	0.0397364	0.0606	0.0129	0.0692	0.0023	0.0757	0.06	0.01	0.07	0.0041	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.213615	NA	NA	NA	NA	NA	0.007	NA	3.9394
1258	16	69303943	69303943	G	A	intronic	SNTB2	NA	NA	NA	intronic	ENSG00000168807	NA	NA	NA	NA	NA	16q22.1	NA	NA	NA	NA	rs17624424	0.03	0.03	0.027	0.0249601	0.0606	0.0198	0.0288	0.003	0.0204	0.06	0.02	0.03	0.0041	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.131381	NA	NA	NA	NA	NA	0.022	NA	3.9394
1258	21	43287616	43287616	G	A	intronic	PRDM15	NA	NA	NA	intronic	ENSG00000141956	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs4919977	0.04	0.04	0.027	0.0467252	0.0606	0.005	0.0504	0.0083	0.1247	0.06	0.0017	0.06	0.01	NA	0.076	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.467658	NA	NA	NA	NA	NA	0.065	NA	3.9394
1258	9	72520823	72520823	T	C	intronic	C9orf135	NA	NA	NA	intronic	ENSG00000204711	NA	NA	NA	NA	NA	9q21.12	NA	NA	NA	NA	rs56235401	0.01	0.01	0.012	0.014377	0.0229	NA	0.0187	0.0023	0.0337	0.02	NA	0.01	0.002	0.0166	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.563086	NA	NA	0.021207	0.004106	NA	0.08	NA	3.939293
1258	1	89580024	89580024	G	A	intronic	GBP2	NA	NA	NA	intronic	ENSG00000162645	NA	NA	NA	NA	NA	1p22.2	NA	NA	NA	NA	rs116671729	0.01	0.01	0.011	0.0071885	0.0209	NA	0.0202	NA	0.001	0.02	NA	0.03	NA	0.0176	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.539801	NA	NA	0.022235	0.004539	NA	0.029	NA	3.939265
1258	13	19999927	19999927	T	G	intronic	TPTE2	NA	NA	NA	exonic	ENSG00000132958	NA	nonsynonymous SNV	ENSG00000132958:ENST00000462409:exon14:c.A956C:p.Q319P	NA	NA	13q12.11	NA	NA	NA	NA	rs4544103	0.54	0.54	0.371	0.519369	0.7087	0.6746	0.5893	0.1309	0.6401	0.66	0.67	0.53	0.18	0.5188	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.037018	NA	NA	NA	NA	NA	0.065	NA	3.9391667
1258	18	21441717	21441717	C	T	exonic	LAMA3	NA	synonymous SNV	LAMA3:NM_001127717:exon35:c.C4530T:p.P1510P,LAMA3:NM_198129:exon35:c.C4530T:p.P1510P	exonic	ENSG00000053747	NA	synonymous SNV	ENSG00000053747:ENST00000313654:exon35:c.C4530T:p.P1510P,ENSG00000053747:ENST00000399516:exon35:c.C4530T:p.P1510P	NA	NA	18q11.2	NA	NA	NA	NA	rs12965685	0.38	0.38	0.37	0.340655	0.6113	0.1746	0.4121	0.1899	0.3865	0.61	0.17	0.46	0.2	0.4995	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.155578	NA	NA	0.617316	0.266601	NA	0.406	NA	3.9385506
1258	1	158986561	158986561	C	T	intronic	IFI16	NA	NA	NA	intronic	ENSG00000163565	NA	NA	NA	NA	NA	1q23.1	NA	NA	NA	NA	rs16841500	0.03	0.03	0.024	0.0239617	0.0616	NA	0.0562	0.0038	0.0143	0.06	NA	0.07	0.01	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.093679	NA	NA	NA	NA	NA	0.13	NA	3.9384
1258	2	241420626	241420626	G	A	intronic	ANKMY1	NA	NA	NA	intronic	ENSG00000144504	NA	NA	NA	NA	NA	2q37.3	NA	NA	NA	NA	rs112401294	0.03	0.03	0.022	0.0353435	0.0616	0.0109	0.0216	0.0015	0.089	0.05	0.01	0.03	0.0041	NA	0.054	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.868964	NA	NA	NA	NA	NA	0.101	NA	3.9384
1258	11	17415143	17415143	A	C	intronic	ABCC8	NA	NA	NA	intronic	ENSG00000006071	NA	NA	NA	NA	NA	11p15.1	NA	NA	NA	NA	rs17846719	0.15	0.15	0.159	0.179513	0.0616	0.0079	0.1931	0.4743	0.0695	0.06	0.01	0.16	0.46	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.458554	NA	NA	NA	NA	NA	0.29	NA	3.9384
1258	11	20075573	20075573	A	T	intronic	NAV2	NA	NA	NA	intronic	ENSG00000166833	NA	NA	NA	NA	NA	11p15.1	NA	NA	NA	NA	rs35849418	0.03	0.03	0.023	0.0215655	0.0616	NA	0.0403	0.0015	0.0164	0.05	NA	0.05	0.0041	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.902028	NA	NA	NA	NA	NA	0.072	NA	3.9384
1258	13	99484109	99484109	G	C	intronic	DOCK9	NA	NA	NA	intronic	ENSG00000088387	NA	NA	NA	NA	NA	13q32.3	NA	NA	NA	NA	rs17709432	0.04	0.04	0.025	0.0245607	0.0616	NA	0.062	0.003	0.0143	0.06	NA	0.08	0.01	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.37737	2.37737	NA	NA	NA	NA	0.029	NA	3.9384
1258	15	64508647	64508647	C	A	intronic	CSNK1G1	NA	NA	NA	intronic	ENSG00000169118,ENSG00000259316	NA	NA	NA	NA	NA	15q22.31	NA	NA	NA	NA	rs72756938	0.02	0.02	0.022	0.0321486	0.0616	0.001	0.0173	0.003	0.0838	0.06	NA	0.02	0.0041	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.026096	2.026096	NA	NA	NA	NA	0.065	NA	3.9384
1258	15	74181301	74181301	C	A	intronic	TBC1D21	NA	NA	NA	intronic	ENSG00000167139	NA	NA	NA	NA	NA	15q24.1	NA	NA	NA	NA	rs74461319	0.03	0.03	0.017	0.0183706	0.0616	NA	0.0216	0.0038	0.0102	0.06	NA	0.03	0.0041	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.738855	NA	NA	NA	NA	NA	0.014	NA	3.9384
1258	22	46785131	46785131	C	T	intronic	CELSR1	NA	NA	NA	intronic	ENSG00000075275	NA	NA	NA	NA	NA	22q13.31	NA	NA	NA	NA	rs6007898	0.04	0.04	0.038	0.043131	0.0616	0.001	0.0346	0.0779	0.0266	0.06	0.0017	0.04	0.07	NA	0.076	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.599089	NA	NA	NA	NA	NA	0.051	NA	3.9384
1258	3	148880183	148880183	C	A	intronic	HPS3	NA	NA	NA	intronic	ENSG00000163755	NA	NA	NA	NA	NA	3q24	NA	NA	NA	NA	rs34470330	0.01	0.01	0.006	0.0169728	0.0258	0.002	0.0187	0.0008	0.044	0.03	0.0017	0.02	NA	0.0359	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.263533	1.263533	NA	NA	NA	NA	0.014	NA	3.9383
1258	4	1705447	1705447	C	T	intronic	SLBP	NA	NA	NA	intronic	ENSG00000163950	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs2854911	0.01	0.01	0.01	0.0223642	0.0189	0.0099	0.013	0.0015	0.0736	0.02	0.01	0.02	NA	0.0238	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.140508	NA	NA	0.01907	0.004312	NA	0.007	NA	3.93823
1258	9	74862290	74862290	G	A	intronic	GDA	NA	NA	NA	intronic	ENSG00000119125	NA	NA	NA	NA	NA	9q21.13	NA	NA	NA	NA	rs145950864	0.01	0.01	0.008	0.00958466	0.0278	NA	0.0259	NA	0.002	0.02	NA	0.04	NA	0.0126	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.03832	NA	NA	0.021405	0.005223	NA	NA	NA	3.938195
1258	9	78942956	78942956	A	G	exonic	PCSK5	NA	synonymous SNV	PCSK5:NM_001190482:exon32:c.A4290G:p.S1430S	exonic	ENSG00000099139	NA	synonymous SNV	ENSG00000099139:ENST00000424854:exon26:c.A3390G:p.S1130S,ENSG00000099139:ENST00000545128:exon32:c.A4290G:p.S1430S	NA	NA	9q21.13	NA	NA	NA	NA	rs2259969	0.5	0.5	0.529	0.51238	0.6024	0.2123	0.451	0.7156	0.498	0.6	0.19	0.48	0.71	0.5363	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.042147	NA	NA	0.589905	0.671804	NA	0.507	NA	3.9380616
1258	16	66946073	66946073	G	A	intronic	CDH16	NA	NA	NA	intronic	ENSG00000166589	NA	NA	NA	NA	NA	16q22.1	NA	NA	NA	NA	rs75675064	0.01	0.01	0.007	0.00579073	0.0219	NA	0.0043	NA	0.0041	0.02	NA	0.01	NA	0.0147	0.025	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.389961	NA	NA	0.025349	0.004318	NA	NA	NA	3.938051
1258	15	40300443	40300443	T	G	intronic	EIF2AK4	NA	NA	NA	intronic	ENSG00000128829	NA	NA	NA	NA	NA	15q15.1	NA	NA	Name=29	NA	rs2279579	0.29	0.29	0.287	0.277955	0.3579	0.247	0.2911	0.1914	0.3354	0.34	0.25	0.36	0.21	0.3366	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.916743	NA	NA	0.367791	0.243863	NA	0.399	NA	3.937709
1258	5	169463421	169463421	C	G	intronic	DOCK2	NA	NA	NA	intronic	ENSG00000134516	NA	NA	NA	NA	NA	5q35.1	NA	NA	NA	NA	rs6899181	0.09	0.09	0.104	0.115415	0.0626	0.0734	0.0548	0.1399	0.2229	0.06	0.08	0.04	0.16	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.152503	NA	NA	NA	NA	NA	0.13	NA	3.9374
1258	9	33471937	33471937	C	T	intronic	NOL6	NA	NA	NA	intronic	ENSG00000165271	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs2992820	0.09	0.09	0.088	0.0916534	0.0626	0.0258	0.0591	0.2413	0.0102	0.05	0.04	0.07	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.228405	NA	NA	NA	NA	NA	0.152	NA	3.9374
1258	9	130980404	130980404	G	A	intronic	DNM1	NA	NA	NA	intronic	ENSG00000106976	NA	NA	NA	NA	NA	9q34.11	NA	NA	NA	NA	rs73672447	0.13	0.13	0.111	0.123003	0.0626	0.3075	0.0504	0.0386	0.1605	0.06	0.34	0.06	0.06	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.712881	NA	NA	NA	NA	NA	0.123	NA	3.9374
1258	10	23688486	23688486	T	C	intergenic	C10orf67,OTUD1	dist=54714;dist=39712	NA	NA	ncRNA_exonic	ENSG00000238515	NA	NA	NA	NA	NA	10p12.2	NA	NA	NA	NA	rs10458696	0.19	0.19	0.171	0.187899	0.0626	0.5188	0.0908	0.093	0.1728	0.07	0.49	0.09	0.1	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.771527	NA	NA	NA	NA	NA	0.159	NA	3.9374
1258	14	56106784	56106784	G	C	intronic	KTN1	NA	NA	NA	intronic	ENSG00000126777	NA	NA	NA	NA	NA	14q22.3	NA	NA	NA	NA	rs9323289	0.05	0.05	0.045	0.0621006	0.0626	0.0159	0.0749	0.0514	0.1145	0.07	0.01	0.07	0.06	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.239754	NA	NA	NA	NA	NA	0.022	NA	3.9374
1258	16	84485395	84485395	C	T	intronic	ATP2C2	NA	NA	NA	intronic	ENSG00000064270	NA	NA	NA	NA	NA	16q24.1	NA	NA	NA	NA	rs116851095	0.03	0.03	0.02	0.0249601	0.0626	0.0069	0.0346	0.0068	0.0225	0.06	0.0017	0.05	0.01	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.933725	NA	NA	NA	NA	NA	0.014	NA	3.9374
1258	19	55174957	55174957	G	A	intronic	LILRB4	NA	NA	NA	intronic	ENSG00000186818	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs117878945	0.02	0.02	0.007	0.0061901	0.0229	NA	0.0101	NA	0.001	0.04	0.02	0.02	0.01	0.0183	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.443574	NA	NA	0.021628	0.005674	NA	0.058	NA	3.937172
1258	12	124179739	124179739	A	G	intronic	TCTN2	NA	NA	NA	intronic	ENSG00000168778	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs12831081	0.27	0.27	0.265	0.272165	0.3588	0.0565	0.2291	0.3971	0.2669	0.36	0.05	0.25	0.39	0.326	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.144734	NA	NA	0.378072	0.41403	NA	0.217	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000114226.2;CLNDSDB=.;CLNDSDBID=.	3.937128
1258	4	68934252	68934252	A	C	ncRNA_intronic	LOC550113	NA	NA	NA	ncRNA_intronic	ENSG00000248049	NA	NA	NA	NA	NA	4q13.2	NA	NA	NA	NA	rs1079449	0.67	0.67	0.651	0.650759	0.7296	0.8661	0.5461	0.4221	0.7311	0.73	0.87	0.6	0.4	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.916367	NA	NA	NA	NA	NA	0.688	NA	3.9370666
1258	7	17861093	17861093	A	C	intronic	SNX13	NA	NA	NA	intronic	ENSG00000071189	NA	NA	NA	NA	NA	7p21.1	NA	NA	NA	NA	rs144264663	0.01	0.01	0.006	0.00798722	0.0239	NA	0.0043	0.0008	0.0123	0.03	NA	0.01	0.002	0.0177	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.856718	1.856718	NA	0.02159	0.00547	NA	NA	NA	3.93681
1258	19	16229122	16229122	C	T	intronic	RAB8A	NA	NA	NA	intronic	ENSG00000167461	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs2233146	0.01	0.01	0.01	0.00798722	0.0209	NA	0.0231	0.0023	NA	0.02	NA	0.03	0.002	0.0157	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.331006	NA	NA	0.02686	0.006355	NA	0.007	NA	3.93654
1258	1	55518160	55518160	C	A	intronic	PCSK9	NA	NA	NA	intronic	ENSG00000169174	NA	NA	NA	NA	NA	1p32.3	NA	NA	NA	NA	rs11806638	0.12	0.12	0.121	0.134185	0.0636	0.0268	0.0677	0.3563	0.0644	0.06	0.03	0.06	0.36	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.021368	NA	NA	NA	NA	NA	0.181	NA	3.9364
1258	1	161090077	161090077	C	G	intronic	NIT1	NA	NA	NA	intronic	ENSG00000158793	NA	NA	NA	NA	NA	1q23.3	NA	NA	NA	NA	rs76729621	0.03	0.03	0.023	0.0263578	0.0636	NA	0.0533	0.0008	0.0307	0.06	NA	0.06	0.0041	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.071467	NA	NA	NA	NA	NA	0.007	NA	3.9364
1258	1	236393637	236393637	C	T	intronic	ERO1LB	NA	NA	NA	intronic	ENSG00000086619	NA	NA	NA	NA	NA	1q42.3	NA	NA	NA	NA	rs114781164	0.03	0.03	0.023	0.0173722	0.0636	NA	0.0202	0.0023	0.0061	0.06	NA	0.02	NA	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.822252	NA	NA	NA	NA	NA	0.014	NA	3.9364
1258	6	29895334	29895334	T	C	intergenic	HCG4B,HLA-A	dist=1906;dist=14913	NA	NA	ncRNA_intronic	ENSG00000230795	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs62390378	0.1	0.1	0.051	0.119808	0.0636	0.3185	0.0476	0.0023	0.183	0.06	0.28	0.05	0.002	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.017757	NA	NA	NA	NA	NA	0.043	NA	3.9364
1258	6	29895772	29895772	C	G	intergenic	HCG4B,HLA-A	dist=2344;dist=14475	NA	NA	ncRNA_intronic	ENSG00000230795	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs138034172	0.1	0.1	0.016	0.120008	0.0636	0.3194	0.0476	0.003	0.182	0.06	0.27	0.04	0.002	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.406506	NA	NA	NA	NA	NA	0.043	NA	3.9364
1258	6	29895788	29895788	G	C	intergenic	HCG4B,HLA-A	dist=2360;dist=14459	NA	NA	ncRNA_intronic	ENSG00000230795	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs144933869	0.09	0.09	0.06	0.120208	0.0636	0.3194	0.0476	0.003	0.183	0.05	0.26	0.04	0.002	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.139881	NA	NA	NA	NA	NA	0.043	NA	3.9364
1258	6	29896125	29896125	G	A	intergenic	HCG4B,HLA-A	dist=2697;dist=14122	NA	NA	ncRNA_intronic	ENSG00000230795	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs56263834	0.1	0.1	0.06	0.120607	0.0636	0.3194	0.0476	0.0023	0.1861	0.06	0.28	0.05	0.002	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.538223	NA	NA	NA	NA	NA	0.094	NA	3.9364
1258	6	29896128	29896128	G	T	intergenic	HCG4B,HLA-A	dist=2700;dist=14119	NA	NA	ncRNA_intronic	ENSG00000230795	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs55803658	0.1	0.1	0.053	0.120407	0.0636	0.3185	0.0476	0.0023	0.1861	0.06	0.28	0.05	0.002	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.550203	NA	NA	NA	NA	NA	0.094	NA	3.9364
1258	6	29896257	29896257	C	T	intergenic	HCG4B,HLA-A	dist=2829;dist=13990	NA	NA	ncRNA_exonic	ENSG00000230795	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs55795233	0.1	0.1	0.057	0.119609	0.0636	0.3165	0.0476	0.0023	0.184	0.06	0.28	0.05	0.002	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.011159	NA	NA	NA	NA	NA	0.094	NA	3.9364
1258	6	29896291	29896291	T	C	intergenic	HCG4B,HLA-A	dist=2863;dist=13956	NA	NA	ncRNA_exonic	ENSG00000230795	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs56285764	0.1	0.1	0.06	0.119609	0.0636	0.3165	0.0476	0.0023	0.184	0.06	0.28	0.05	0.002	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.295243	NA	NA	NA	NA	NA	0.087	NA	3.9364
1258	9	33467614	33467614	T	C	intronic	NOL6	NA	NA	NA	intronic	ENSG00000165271	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs501213	0.09	0.09	0.096	0.0930511	0.0636	0.0218	0.0591	0.2489	0.0102	0.05	0.03	0.07	0.24	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.113432	NA	NA	NA	NA	NA	0.152	NA	3.9364
1258	16	23366528	23366528	C	G	intronic	SCNN1B	NA	NA	NA	intronic	ENSG00000168447	NA	NA	NA	NA	NA	16p12.2	NA	NA	NA	NA	rs2301601	0.1	0.1	0.106	0.105631	0.0636	0.13	0.0836	0.1498	0.0798	0.06	0.13	0.08	0.15	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.32475	NA	NA	NA	NA	NA	0.094	NA	3.9364
1258	12	113605769	113605769	C	T	intronic	DDX54	NA	NA	NA	intronic	ENSG00000123064	NA	NA	NA	NA	NA	12q24.13	NA	NA	NA	NA	rs117291153	0.01	0.01	0.007	0.0103834	0.0209	NA	0.0144	0.0008	0.0204	0.01	NA	0.01	NA	0.0196	0.023	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.94376	NA	NA	0.023104	0.005708	NA	0.014	NA	3.936396
1258	1	229596565	229596565	C	T	intronic	NUP133	NA	NA	NA	intronic	ENSG00000069248	NA	NA	NA	NA	NA	1q42.13	NA	NA	NA	NA	rs74971830	0.01	0.01	0.005	0.00479233	0.0159	NA	0.0058	NA	0.0041	0.02	NA	0.01	NA	0.0191	0.029	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.602872	NA	NA	0.028628	0.005563	NA	NA	NA	3.936372
1258	15	52545702	52545702	C	T	intronic	MYO5C	NA	NA	NA	intronic	ENSG00000128833	NA	NA	NA	NA	NA	15q21.2	NA	NA	NA	NA	rs74455958	0.09	0.09	0.076	0.0966454	0.0099	0.1379	0.1225	0.1558	0.045	0.01	0.15	0.08	0.16	0.0439	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.265374	NA	NA	0.009843	0.130028	NA	0.101	NA	3.936357
1258	18	28712686	28712686	A	G	intronic	DSC1	NA	NA	NA	ncRNA_intronic	ENSG00000265888	NA	NA	NA	NA	NA	18q12.1	NA	NA	NA	NA	rs1992143	0.18	0.18	0.166	0.151158	0.1243	0.377	0.2349	0.0076	0.0808	0.11	0.41	0.2	0.02	0.152	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.190813	NA	NA	0.12081	0.024069	ID=COSN165627;OCCURENCE=1(NS)	0.254	NA	3.9362233
1258	5	13870836	13870836	G	A	intronic	DNAH5	NA	NA	NA	ncRNA_intronic	ENSG00000251423	NA	NA	NA	NA	NA	5p15.2	NA	NA	NA	NA	rs35621834	0.1	0.1	0.092	0.076877	0.1501	0.1042	0.0677	0.0356	0.0358	0.15	0.09	0.07	0.05	0.1129	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.313738	1.313738	NA	0.134163	0.050159	NA	0.065	NA	3.9361703
1258	6	32805262	32805262	A	G	intronic	TAP2	NA	NA	NA	intronic	ENSG00000204267,ENSG00000250264	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs56145201	0.04	0.04	0.032	0.0405351	0.0358	0.0982	0.0115	0.0045	0.0552	0.04	0.09	0.02	0.01	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.146538	NA	NA	0.028155	0.009143	NA	0.065	NA	3.936045
1258	18	5956483	5956483	G	C	intronic	L3MBTL4	NA	NA	NA	ncRNA_intronic	ENSG00000265487	NA	NA	NA	NA	NA	18p11.31	NA	NA	NA	NA	rs3737357	0.38	0.38	0.35	0.384784	0.3976	0.4742	0.2723	0.2927	0.4836	0.41	0.47	0.28	0.3	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.910812	NA	NA	NA	NA	NA	0.362	NA	3.9357333
1258	10	102762256	102762256	C	T	UTR5	LZTS2	NM_032429:c.-40C>T	NA	NA	UTR5	ENSG00000107816	ENST00000426584:c.-40C>T,ENST00000370223:c.-40C>T,ENST00000429732:c.-40C>T,ENST00000481129:c.-40C>T,ENST00000370220:c.-40C>T,ENST00000454422:c.-40C>T	NA	NA	Score=415;Name=lod=65	NA	10q24.31	NA	NA	NA	NA	rs752974	0.29	0.29	0.265	0.27496	0.4891	0.0903	0.4928	0.084	0.3487	0.49	0.12	0.43	0.08	0.43	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.530826	NA	NA	0.478613	0.138249	NA	0.362	NA	3.9356204
1258	2	208134114	208134114	A	T	intergenic	KLF7,CREB1	dist=102144;dist=260502	NA	NA	ncRNA_exonic	ENSG00000221628	NA	NA	NA	NA	NA	2q33.3	NA	NA	NA	NA	rs116237969	0.02	0.02	0.018	0.0275559	0.0159	NA	0.0288	0.0605	0.0225	0.02	NA	0.04	0.06	0.0287	0.061	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.066381	NA	NA	0.019994	0.061224	NA	0.022	NA	3.935406
1258	1	118534976	118534976	T	C	intronic	SPAG17	NA	NA	NA	intronic	ENSG00000155761	NA	NA	NA	NA	NA	1p12	NA	NA	NA	NA	rs12125318	0.12	0.12	0.116	0.136781	0.0646	0.3264	0.0504	0.053	0.1902	0.06	0.3	0.05	0.06	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.396333	1.396333	NA	NA	NA	NA	0.065	NA	3.9354
1258	6	29895782	29895782	T	C	intergenic	HCG4B,HLA-A	dist=2354;dist=14465	NA	NA	ncRNA_intronic	ENSG00000230795	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs142655476	0.09	0.09	0.05	0.120407	0.0646	0.3194	0.0476	0.003	0.183	0.05	0.26	0.04	0.002	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.258697	NA	NA	NA	NA	NA	0.043	NA	3.9354
1258	6	29895798	29895798	G	A	intergenic	HCG4B,HLA-A	dist=2370;dist=14449	NA	NA	ncRNA_intronic	ENSG00000230795	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs138703942	0.09	0.09	0.007	0.120607	0.0646	0.3194	0.0476	0.003	0.184	0.05	0.26	0.04	0.002	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.930263	NA	NA	NA	NA	NA	0.029	NA	3.9354
1258	7	87839528	87839528	A	G	intronic	SRI	NA	NA	NA	intronic	ENSG00000075142	NA	NA	NA	NA	NA	7q21.12	NA	NA	NA	NA	rs4728737	0.05	0.05	0.056	0.0623003	0.0646	0.0744	0.072	0.0121	0.1084	0.07	0.07	0.05	0.01	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.762387	NA	NA	NA	NA	NA	0.094	NA	3.9354
1258	9	29826486	29826486	G	A	intergenic	LINGO2,LOC401497	dist=613488;dist=562447	NA	NA	ncRNA_exonic	ENSG00000230097	NA	NA	NA	NA	NA	9p21.1	NA	NA	NA	NA	rs79694178	0.03	0.03	0.02	0.0215655	0.0646	NA	0.0231	0.003	0.0235	0.06	NA	0.03	0.01	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.383748	NA	NA	NA	NA	NA	0.014	NA	3.9354
1258	9	116130725	116130725	T	C	intronic	BSPRY	NA	NA	NA	intronic	ENSG00000119411	NA	NA	NA	NA	NA	9q32	NA	NA	NA	NA	rs2296074	0.05	0.05	0.05	0.0605032	0.0646	0.0734	0.0476	0.0045	0.1278	0.06	0.08	0.05	0.01	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.076866	2.076866	NA	NA	NA	NA	0.036	NA	3.9354
1258	14	68023869	68023869	G	A	intronic	PLEKHH1	NA	NA	NA	intronic	ENSG00000054690	NA	NA	NA	NA	NA	14q24.1	NA	NA	NA	NA	rs10873206	0.05	0.05	0.06	0.0473243	0.0646	NA	0.0317	0.0847	0.0389	0.06	NA	0.04	0.09	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.737301	3.737301	NA	NA	NA	NA	0.029	NA	3.9354
1258	17	42232405	42232405	G	A	intronic	C17orf53	NA	NA	NA	intronic	ENSG00000125319	NA	NA	NA	NA	NA	17q21.31	NA	NA	NA	NA	rs62078933	0.03	0.03	0.021	0.0179712	0.0646	NA	0.0187	0.0038	0.0072	0.06	NA	0.02	0.01	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.172048	NA	NA	NA	NA	NA	NA	NA	3.9354
1258	18	29450527	29450527	G	A	intronic	TRAPPC8	NA	NA	NA	intronic	ENSG00000153339	NA	NA	NA	NA	NA	18q12.1	NA	NA	NA	NA	rs77278243	0.05	0.05	0.052	0.0511182	0.0646	0.0109	0.0432	0.0666	0.0634	0.07	0.01	0.03	0.08	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.887269	NA	NA	NA	NA	NA	0.051	NA	3.9354
1258	2	182763529	182763529	A	T	intronic	SSFA2	NA	NA	NA	intronic	ENSG00000138434	NA	NA	NA	NA	NA	2q31.3	NA	NA	NA	NA	rs2059702	0.13	0.13	0.148	0.161342	0.0348	0.0843	0.0634	0.4032	0.1135	0.03	0.11	0.06	0.37	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.728005	1.728005	NA	0.029893	0.361994	NA	0.167	NA	3.935307
1258	21	35260481	35260481	T	C	exonic	ITSN1	NA	synonymous SNV	ITSN1:NM_003024:exon40:c.T5043C:p.R1681R	exonic	ENSG00000205726	NA	synonymous SNV	ENSG00000205726:ENST00000437442:exon37:c.T4860C:p.R1620R,ENSG00000205726:ENST00000399367:exon39:c.T5028C:p.R1676R,ENSG00000205726:ENST00000381285:exon40:c.T5043C:p.R1681R,ENSG00000205726:ENST00000381318:exon40:c.T5043C:p.R1681R	NA	NA	21q22.11	NA	NA	NA	NA	rs2073370	0.56	0.56	0.547	0.575679	0.5825	0.7054	0.487	0.4592	0.6554	0.56	0.69	0.51	0.43	0.5767	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.128078	NA	NA	0.572209	0.509986	NA	0.551	NA	3.9352576
1258	6	29857965	29857965	G	A	ncRNA_intronic	HLA-H	NA	NA	NA	ncRNA_intronic	ENSG00000206341	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs9259269	0.69	0.69	0.692	0.694688	0.7316	0.5923	0.7723	0.7239	0.6677	0.71	0.56	0.71	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.143949	NA	NA	NA	NA	NA	0.638	NA	3.9350666
1259	5	37008690	37008690	T	C	intronic	NIPBL	NA	NA	NA	intronic	ENSG00000164190	NA	NA	NA	NA	NA	5p13.2	NA	NA	NA	NA	rs147490589	0.01	0.01	0.007	0.00798722	0.0249	NA	0.0058	0.0008	0.0102	0.02	NA	0.01	NA	0.0161	0.024	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.643459	NA	NA	0.024153	0.004053	NA	NA	NA	3.934847
1259	13	36402325	36402325	T	A	ncRNA_intronic	MIR548F5	NA	NA	NA	intronic	ENSG00000133083	NA	NA	NA	NA	NA	13q13.3	NA	NA	NA	NA	rs2296644	0.25	0.25	0.237	0.281949	0.1988	0.4673	0.2392	0.1573	0.3753	0.19	0.44	0.23	0.15	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.76508	NA	NA	0.199811	0.169075	NA	0.217	NA	3.9347223
1259	12	29608361	29608361	T	A	ncRNA_intronic	LOC101055625	NA	NA	NA	intronic	ENSG00000187950,ENSG00000257599	NA	NA	NA	NA	NA	12p11.22	NA	NA	NA	NA	rs11050237	0.11	0.11	0.107	0.107029	0.1352	0.0724	0.0836	0.1377	0.089	0.14	0.08	0.07	0.13	0.1246	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.340799	NA	NA	0.138842	0.136957	NA	0.13	NA	3.9346913
1259	14	76548739	76548739	G	A	intronic	IFT43	NA	NA	NA	intronic	ENSG00000119650	NA	NA	NA	NA	NA	14q24.3	NA	NA	NA	NA	rs116881452	0.03	0.03	0.03	0.0327476	0.0199	0.0794	0.0086	0.0015	0.0573	0.02	0.08	0.01	NA	0.0268	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.572813	NA	NA	0.018721	0.003858	NA	0.022	NA	3.934579
1259	1	151107496	151107496	G	A	intronic	SEMA6C	NA	NA	NA	intronic	ENSG00000143434	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs12090246	0.06	0.06	0.062	0.0549121	0.0656	NA	0.0346	0.1339	0.0082	0.07	NA	0.03	0.12	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.725746	2.725746	NA	NA	NA	NA	0.058	NA	3.9344
1259	4	106766496	106766496	A	G	intronic	GSTCD	NA	NA	NA	intronic	ENSG00000138780,ENSG00000138785	NA	NA	NA	NA	NA	4q24	NA	NA	NA	NA	rs11726124	0.04	0.04	0.044	0.0333466	0.0656	NA	0.0591	0.0303	0.0204	0.07	NA	0.07	0.02	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.016783	NA	NA	NA	NA	NA	0.036	NA	3.9344
1259	4	187557120	187557120	T	C	intronic	FAT1	NA	NA	NA	intronic	ENSG00000083857	NA	NA	NA	NA	NA	4q35.2	NA	NA	NA	NA	rs28372109	0.05	0.05	0.053	0.0401358	0.0656	0.0268	0.0303	0.0371	0.0389	0.07	0.03	0.04	0.03	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.362565	NA	NA	NA	NA	NA	0.022	NA	3.9344
1259	16	67036913	67036913	G	C	intronic	CES4A	NA	NA	NA	intronic	ENSG00000172824	NA	NA	NA	NA	NA	16q22.1	NA	NA	NA	NA	rs117385661	0.03	0.03	0.031	0.0279553	0.0656	NA	0.0115	0.0038	0.0624	0.08	NA	0.01	0.002	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.251431	NA	NA	NA	NA	NA	0.029	NA	3.9344
1259	19	52130337	52130337	T	C	intronic	SIGLEC5	NA	NA	NA	intronic	ENSG00000105501,ENSG00000268500	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs8105105	0.15	0.15	0.154	0.158347	0.0656	0.2004	0.0576	0.2632	0.1401	0.06	0.22	0.07	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.151443	NA	NA	NA	NA	NA	0.152	NA	3.9344
1259	22	33670679	33670679	G	A	intronic	LARGE	NA	NA	NA	intronic	ENSG00000133424	NA	NA	NA	NA	NA	22q12.3	NA	NA	NA	NA	rs41282597	0.03	0.03	0.03	0.0209665	0.0656	0.001	0.0403	0.0038	0.0051	0.06	NA	0.04	0.01	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.778758	NA	NA	NA	NA	NA	0.022	NA	3.9344
1259	3	160135488	160135488	T	G	intronic	SMC4	NA	NA	NA	intronic	ENSG00000113810,ENSG00000248710	NA	NA	NA	NA	NA	3q25.33	NA	NA	NA	NA	rs9813697	0.04	0.04	0.045	0.0467252	0.0189	NA	0.0274	0.1369	0.0153	0.02	NA	0.02	0.15	0.0262	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.321943	1.321943	NA	0.021061	0.120799	NA	0.036	NA	3.933839
1259	7	29760201	29760201	T	C	intergenic	DPY19L2P3,WIPF3	dist=32342;dist=85969	NA	NA	ncRNA_intronic	ENSG00000227855	NA	NA	NA	NA	NA	7p14.3	NA	NA	NA	NA	rs113304427	0.03	0.03	0.023	0.0231629	0.0666	NA	0.0476	0.0008	0.0153	0.06	NA	0.05	0.002	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.067741	NA	NA	NA	NA	NA	0.029	NA	3.9334
1259	1	20997072	20997072	A	G	intronic	KIF17	NA	NA	NA	intronic	ENSG00000117245	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs41265075	0.03	0.03	0.014	0.0213658	0.0666	NA	0.0432	0.0023	0.0072	0.07	NA	0.05	0.01	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.645631	NA	NA	NA	NA	NA	0.036	NA	3.9334
1259	7	47943869	47943869	G	A	intronic	PKD1L1	NA	NA	NA	intronic	ENSG00000136273,ENSG00000158683	NA	NA	NA	NA	NA	7p12.3	NA	NA	NA	NA	rs6956732	0.09	0.09	0.087	0.0894569	0.0666	0.1359	0.1124	0.0234	0.138	0.06	0.18	0.1	0.03	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.155662	NA	NA	NA	NA	NA	0.029	NA	3.9334
1259	8	131130553	131130553	T	C	intronic	ASAP1	NA	NA	NA	intronic	ENSG00000153317	NA	NA	NA	NA	NA	8q24.21	NA	NA	NA	NA	rs118138898	0.03	0.03	0.031	0.0183706	0.0666	NA	0.0274	0.0023	0.0031	0.06	NA	0.04	0.0041	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.385272	NA	NA	NA	NA	NA	0.022	NA	3.9334
1259	11	62766203	62766203	C	T	intronic	SLC22A8	NA	NA	NA	intronic	ENSG00000149452	NA	NA	NA	NA	NA	11q12.3	NA	NA	NA	NA	rs72933455	0.03	0.03	0.032	0.0221645	0.0666	0.0079	0.0274	0.0023	0.0143	0.06	0.01	0.04	0.01	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.167246	NA	NA	NA	NA	NA	0.08	NA	3.9334
1259	12	665655	665655	G	A	intronic	B4GALNT3	NA	NA	NA	intronic	ENSG00000139044	NA	NA	NA	NA	NA	12p13.33	NA	NA	NA	NA	rs2075027	0.15	0.15	0.164	0.15615	0.0666	0.4038	0.0634	0.0484	0.2045	0.07	0.39	0.07	0.05	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.91567	NA	NA	NA	NA	NA	0.116	NA	3.9334
1259	15	26806393	26806393	T	C	intronic	GABRB3	NA	NA	NA	intronic	ENSG00000166206	NA	NA	NA	NA	NA	15q12	NA	NA	NA	NA	rs3751583	0.06	0.06	0.045	0.0628994	0.0666	0.0327	0.1383	0.0113	0.1063	0.07	0.04	0.12	0.01	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.00536	NA	NA	NA	NA	NA	0.022	NA	3.9334
1259	10	88946977	88946977	T	A	intronic	FAM35A	NA	NA	NA	intronic	ENSG00000122376	NA	NA	NA	NA	NA	10q23.2	NA	NA	NA	NA	rs7913563	0.05	0.05	0.044	0.052516	0.0159	NA	0.0274	0.1702	0.0031	0.01	NA	0.04	0.19	0.0299	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.370247	NA	NA	0.020828	0.152292	NA	0.007	NA	3.933372
1259	7	139725964	139725964	G	A	intronic	PARP12	NA	NA	NA	intronic	ENSG00000059378	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs118130826	0.01	0.01	0.008	0.0111821	0.0229	NA	0.0086	0.003	0.0235	0.02	NA	0.01	0.002	0.0197	0.024	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.912474	NA	NA	0.024302	0.004312	NA	0.014	NA	3.933098
1259	11	5719504	5719504	A	G	intronic	TRIM22	NA	NA	NA	intronic	ENSG00000132256,ENSG00000132274	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs74813137	0.01	0.01	0.004	0.0071885	0.0219	0.001	0.0115	0.003	0.001	0.02	NA	0.02	0.01	0.0167	0.029	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.194996	NA	NA	0.028551	0.005032	NA	NA	NA	3.932849
1259	9	101065504	101065504	C	T	intronic	GABBR2	NA	NA	NA	intronic	ENSG00000136928	NA	NA	NA	NA	NA	9q22.33	NA	NA	NA	NA	rs73490787	0.06	0.06	0.066	0.0577077	0.0169	NA	0.0259	0.1914	0.001	0.02	NA	0.02	0.23	0.0276	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.429115	NA	NA	0.022907	0.146618	NA	0.087	NA	3.932593
1259	5	96093011	96093011	C	T	intronic	CAST	NA	NA	NA	intronic	ENSG00000153113	NA	NA	NA	NA	NA	5q15	NA	NA	NA	NA	rs2290676	0.07	0.07	0.075	0.101038	0.0676	0.0238	0.0576	0.1785	0.1411	0.05	0.03	0.07	0.15	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.326206	NA	NA	NA	NA	NA	0.101	NA	3.9324
1259	8	139706888	139706888	G	A	intronic	COL22A1	NA	NA	NA	intronic	ENSG00000169436	NA	NA	NA	NA	NA	8q24.23	NA	NA	NA	NA	rs10109299	0.12	0.12	0.13	0.137979	0.0676	0.0238	0.0793	0.3533	0.0787	0.06	0.02	0.11	0.34	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.343066	NA	NA	NA	NA	NA	0.254	NA	3.9324
1259	9	107484679	107484679	G	C	intergenic	OR13D1,NIPSNAP3A	dist=26936;dist=25290	NA	NA	ncRNA_exonic	ENSG00000188712	NA	NA	NA	NA	NA	9q31.1	NA	NA	NA	NA	rs71511781	0.08	0.08	0.073	0.114617	0.0676	0.002	0.0576	0.2436	0.1452	0.06	0.0017	0.07	0.2	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.276096	NA	NA	NA	NA	NA	0.101	NA	3.9324
1259	14	20844194	20844194	T	C	intronic	TEP1	NA	NA	NA	intronic	ENSG00000129566	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs45616833	0.04	0.04	0.048	0.0505192	0.0676	0.002	0.0346	0.0582	0.0838	0.07	NA	0.03	0.06	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.477386	NA	NA	NA	NA	NA	0.029	NA	3.9324
1259	15	55912528	55912528	C	T	intronic	PRTG	NA	NA	NA	intronic	ENSG00000166450	NA	NA	NA	NA	NA	15q21.3	NA	NA	NA	NA	rs1438915	0.03	0.03	0.025	0.0225639	0.0676	NA	0.0288	0.0015	0.0235	0.07	NA	0.03	0.002	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.692609	NA	NA	NA	NA	NA	0.058	NA	3.9324
1259	19	10267011	10267011	C	A	intronic	DNMT1	NA	NA	NA	intronic	ENSG00000130816	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs4804490	0.19	0.19	0.176	0.204273	0.0676	0.3681	0.1844	0.171	0.2352	0.06	0.39	0.17	0.18	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.349511	NA	NA	NA	NA	NA	0.181	NA	3.9324
1259	19	10267252	10267252	G	T	intronic	DNMT1	NA	NA	NA	intronic	ENSG00000130816	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs10421746	0.21	0.21	0.193	0.222843	0.0676	0.3681	0.1859	0.2405	0.2352	0.06	0.39	0.17	0.27	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.284711	NA	NA	NA	NA	NA	0.239	NA	3.9324
1259	19	10267266	10267266	C	A	intronic	DNMT1	NA	NA	NA	intronic	ENSG00000130816	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs10423341	0.21	0.21	0.195	0.222644	0.0676	0.3681	0.1859	0.2398	0.2352	0.06	0.39	0.17	0.26	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.679061	NA	NA	NA	NA	NA	0.239	NA	3.9324
1259	19	10283932	10283932	C	T	intronic	DNMT1	NA	NA	NA	intronic	ENSG00000130816	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs2288350	0.19	0.19	0.158	0.199081	0.0676	0.369	0.1844	0.1505	0.2352	0.06	0.39	0.17	0.15	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.127233	NA	NA	NA	NA	ID=COSN165720;OCCURENCE=1(breast)	0.21	NA	3.9324
1259	19	56477499	56477499	G	A	intronic	NLRP8	NA	NA	NA	intronic	ENSG00000179709	NA	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs73934219	0.06	0.06	0.062	0.0593051	0.0676	0.001	0.0821	0.1225	0.0092	0.06	NA	0.1	0.11	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.693839	NA	NA	NA	NA	NA	0.087	NA	3.9324
1259	3	51668102	51668102	C	T	intronic	RAD54L2	NA	NA	NA	intronic	ENSG00000164080	NA	NA	NA	NA	NA	3p21.2	NA	NA	NA	NA	rs76085189	0.01	0.01	0.016	0.00978435	0.0358	NA	0.0086	0.0038	0.002	0.03	NA	0.02	0.0041	NA	0.032	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.221725	NA	NA	0.031832	0.006782	NA	NA	NA	3.932368
1259	17	61995098	61995098	G	A	intronic	GH1	NA	NA	NA	intronic	ENSG00000204414,ENSG00000259384	NA	NA	NA	NA	NA	17q23.3	NA	NA	NA	NA	rs41295245	0.01	0.01	NA	0.0103834	0.0219	NA	0.0144	0.0008	0.0194	0.02	NA	0.01	0.002	0.0224	0.024	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.038701	NA	NA	0.023721	0.004312	NA	0.051	NA	3.931979
1259	19	50062280	50062280	C	T	intronic	NOSIP	NA	NA	NA	intronic	ENSG00000142546	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs79151664	0.01	0.01	0.014	0.0163738	0.0229	NA	0.0115	0.0008	0.0511	0.03	NA	0.01	NA	0.0216	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.349142	NA	NA	0.023605	0.006128	NA	0.007	NA	3.931895
1259	2	98418876	98418876	C	T	intronic	TMEM131	NA	NA	NA	intronic	ENSG00000075568	NA	NA	NA	NA	NA	2q11.2	NA	NA	NA	NA	rs17022568	0.02	0.02	0.02	0.0269569	0.0239	NA	0.0288	0.0681	0.001	0.02	NA	0.03	0.05	0.0209	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.631276	NA	NA	0.023315	0.047983	NA	0.014	NA	3.931885
1259	4	189061818	189061818	A	G	intronic	TRIML1	NA	NA	NA	intronic	ENSG00000184108	NA	NA	NA	NA	NA	4q35.2	NA	NA	NA	NA	rs111987767	0.02	0.02	0.023	0.0251597	0.0179	NA	0.0101	0.0582	0.0245	0.02	NA	0.01	0.06	0.0256	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.847628	NA	NA	0.024767	0.046754	NA	0.022	NA	3.931733
1259	1	166926999	166926999	T	C	intronic	ILDR2	NA	NA	NA	intronic	ENSG00000143195	NA	NA	NA	NA	NA	1q24.1	NA	NA	NA	NA	rs34175991	0.01	0.01	0.005	0.00599042	0.0219	NA	0.0115	NA	NA	0.02	NA	0.01	NA	0.0193	0.027	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.410333	2.410333	NA	0.027093	0.007717	NA	0.014	NA	3.931707
1259	3	132230110	132230110	C	T	intronic	DNAJC13	NA	NA	NA	intronic	ENSG00000138246	NA	NA	NA	NA	NA	3q22.1	NA	NA	NA	NA	rs7651731	0.04	0.04	0.042	0.0505192	0.0209	NA	0.0216	0.1611	0.0041	0.02	NA	0.03	0.12	0.0277	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.61737	NA	NA	0.019767	0.133454	NA	0.065	NA	3.931633
1259	14	100792482	100792482	C	A	intronic	SLC25A47	NA	NA	NA	UTR5	ENSG00000140107	ENST00000557052:c.-2692C>A	NA	NA	NA	NA	14q32.2	NA	Name=ERalpha_a	Name=6	NA	rs1951519	0.71	0.71	0.676	0.714257	0.7495	0.7569	0.8357	0.5174	0.8139	0.75	0.76	0.82	0.5	0.7544	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.048437	NA	NA	0.731163	0.540399	NA	0.594	NA	3.9316037
1259	8	82606782	82606782	A	G	exonic	SLC10A5	NA	synonymous SNV	SLC10A5:NM_001010893:exon1:c.T426C:p.N142N	exonic	ENSG00000253598	NA	synonymous SNV	ENSG00000253598:ENST00000518568:exon1:c.T426C:p.N142N	NA	NA	8q21.13	NA	NA	NA	NA	rs2955006	0.41	0.41	0.366	0.441294	0.5934	0.129	0.6037	0.3359	0.6339	0.58	0.11	0.59	0.34	0.5452	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.630372	NA	NA	0.596512	0.394689	NA	0.536	NA	3.9315546
1259	20	2559778	2559778	G	C	intronic	TMC2	NA	NA	NA	intronic	ENSG00000149488	NA	NA	NA	NA	NA	20p13	NA	Name=FOSL2	Name=3	NA	rs6083735	0.67	0.67	0.643	0.695288	0.6958	0.5228	0.6888	0.798	0.7382	0.71	0.49	0.7	0.8	0.6918	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.750836	NA	NA	0.68093	0.776668	ID=COSN166461;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.768	NA	3.93147
1259	1	118497292	118497292	G	A	intronic	SPAG17,WDR3	NA	NA	NA	intronic	ENSG00000065183,ENSG00000155761	NA	NA	NA	NA	NA	1p12	NA	NA	NA	NA	rs2295631	0.09	0.09	0.088	0.0852636	0.0278	0.3056	0.0101	0.0008	0.0849	0.03	0.3	0.02	0.002	0.0408	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.798142	NA	NA	NA	NA	ID=COSN163201;OCCURENCE=1(NS)	0.043	NA	3.9314
1259	1	150416621	150416621	G	C	intronic	RPRD2	NA	NA	NA	intronic	ENSG00000163125	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs74124686	0.06	0.06	0.057	0.0545128	0.0686	0.001	0.0403	0.115	0.0235	0.07	0.0017	0.04	0.11	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.123588	NA	NA	NA	NA	NA	0.051	NA	3.9314
1259	6	158296323	158296323	C	T	intronic	SNX9	NA	NA	NA	intronic	ENSG00000130340	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs35213314	0.03	0.03	0.027	0.0423323	0.0686	0.002	0.0216	0.0045	0.1227	0.07	0.0017	0.02	0.0041	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.348621	NA	NA	NA	NA	NA	NA	NA	3.9314
1259	10	135098519	135098519	G	A	intronic	TUBGCP2	NA	NA	NA	intronic	ENSG00000130640	NA	NA	NA	NA	NA	10q26.3	NA	NA	NA	NA	rs72864790	0.05	0.05	0.05	0.04373	0.0686	0.001	0.0389	0.0809	0.0153	0.07	NA	0.05	0.08	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.780389	NA	NA	NA	NA	NA	0.043	NA	3.9314
1259	12	124281474	124281474	G	A	intronic	DNAH10	NA	NA	NA	intronic	ENSG00000197653	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs112316270	0.05	0.05	0.023	0.0513179	0.0686	0.001	0.0504	0.0983	0.0225	0.07	NA	0.06	0.07	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.157206	NA	NA	NA	NA	NA	0.072	NA	3.9314
1259	12	124857293	124857293	G	A	intronic	NCOR2	NA	NA	NA	intronic	ENSG00000196498	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs1109270	0.24	0.24	0.214	0.224441	0.0686	0.6081	0.1124	0.1959	0.1074	0.07	0.61	0.1	0.16	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.213404	NA	NA	NA	NA	NA	0.159	NA	3.9314
1259	15	42436069	42436069	C	T	intronic	PLA2G4F	NA	NA	NA	intronic	ENSG00000168907	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs77217281	0.05	0.05	0.065	0.0501198	0.0686	0.0169	0.0389	0.0794	0.0337	0.07	0.02	0.04	0.08	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.162254	NA	NA	NA	NA	NA	0.08	NA	3.9314
1259	17	27238032	27238032	G	A	intronic	PHF12	NA	NA	NA	intronic	ENSG00000109118	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs75491281	0.03	0.03	0.032	0.0207668	0.0686	NA	0.0274	0.0015	0.0143	0.08	NA	0.02	0.002	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.872043	NA	NA	NA	NA	NA	0.036	NA	3.9314
1259	20	17390095	17390095	A	T	intronic	PCSK2	NA	NA	NA	intronic	ENSG00000125851	NA	NA	NA	NA	NA	20p12.1	NA	NA	NA	NA	rs2195108	0.06	0.06	0.057	0.0654952	0.0686	NA	0.0735	0.1392	0.0245	0.05	NA	0.06	0.14	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.586	NA	NA	NA	NA	NA	0.152	NA	3.9314
1259	5	32061072	32061072	G	A	intronic	PDZD2	NA	NA	NA	intronic	ENSG00000133401	NA	NA	NA	NA	NA	5p13.3	NA	NA	NA	NA	rs72761539	0.02	0.02	0.013	0.0353435	0.0179	0.0099	0.013	0.0227	0.1125	0.02	0.01	0.02	0.02	0.0283	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.951008	2.951008	NA	0.022442	0.03291	NA	0.014	NA	3.931358
1259	1	114372524	114372524	A	G	intronic	PTPN22	NA	NA	NA	intronic	ENSG00000134242	NA	NA	NA	NA	NA	1p13.2	NA	NA	NA	NA	rs34209542	0.01	0.01	0.013	0.0115815	0.0278	NA	0.0202	0.0023	0.0133	0.03	NA	0.02	0.002	0.0189	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.403048	NA	NA	0.022505	0.006007	NA	0.007	NA	3.930795
1259	11	71276632	71276632	T	C	UTR5	KRTAP5-10	NM_001012710:c.-2T>C	NA	NA	UTR5	ENSG00000204572	ENST00000398531:c.-2T>C	NA	NA	Score=440;Name=lod=82	NA	11q13.4	NA	NA	NA	NA	rs36164574	0.64	0.64	0.617	0.590455	0.4751	0.6151	0.6066	0.8691	0.2955	0.49	0.67	0.62	0.85	0.5012	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.794492	NA	NA	0.426587	0.800415	NA	0.384	NA	3.9304464
1259	8	72935045	72935045	G	C	ncRNA_UTR3	TRPA1	NA	NA	NA	UTR3	ENSG00000104321	ENST00000262209:c.*96C>G	NA	NA	NA	NA	8q13.3	NA	NA	NA	NA	rs10086177	0.72	0.72	0.705	0.709864	0.5696	0.9187	0.6916	0.7088	0.6534	0.59	0.94	0.66	0.7	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.589488	NA	NA	NA	NA	NA	0.63	NA	3.9304
1259	16	109665	109665	A	G	intronic	RHBDF1	NA	NA	NA	intronic	ENSG00000007384	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs3213509	0.15	0.15	0.106	0.196086	0.0696	0.3214	0.3055	0.0386	0.3323	0.07	0.3	0.25	0.04	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.24758	NA	NA	NA	NA	NA	0.087	NA	3.9304
1259	6	26091336	26091336	T	C	intronic	HFE	NA	NA	NA	intronic	ENSG00000010704	NA	NA	NA	NA	NA	6p22.2	NA	NA	NA	NA	rs2071303	0.46	0.46	0.448	0.426717	0.3658	0.629	0.4222	0.379	0.3487	0.37	0.7	0.38	0.37	0.3686	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.906519	NA	NA	0.335581	0.365865	ID=COSM150061;OCCURENCE=1(stomach)	0.384	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000117221.2;CLNDSDB=.;CLNDSDBID=.	3.930019
1259	1	75086412	75086412	G	C	intronic	C1orf173	NA	NA	NA	ncRNA_intronic	ENSG00000234497	NA	NA	NA	NA	NA	1p31.1	NA	NA	NA	NA	rs41289218	0.16	0.16	0.143	0.171925	0.1292	0.2659	0.1787	0.0666	0.2566	0.14	0.25	0.18	0.08	0.1602	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.03603	NA	NA	0.114186	0.062188	NA	0.116	NA	3.9297473
1259	1	77635148	77635148	A	G	intronic	PIGK	NA	NA	NA	intronic	ENSG00000142892	NA	NA	NA	NA	NA	1p31.1	NA	NA	NA	NA	rs1779198	0.17	0.17	0.165	0.19349	0.0706	0.0387	0.2334	0.4697	0.0777	0.06	0.04	0.2	0.45	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.395351	NA	NA	NA	NA	NA	0.188	NA	3.9294
1259	1	204945746	204945746	G	C	intronic	NFASC	NA	NA	NA	intronic	ENSG00000163531	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs6668366	0.1	0.1	0.102	0.0974441	0.0706	0.0099	0.0648	0.2262	0.0644	0.07	0.01	0.07	0.26	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.649663	NA	NA	NA	NA	NA	0.13	NA	3.9294
1259	4	189064860	189064860	C	A	intronic	TRIML1	NA	NA	NA	intronic	ENSG00000184108	NA	NA	NA	NA	NA	4q35.2	NA	NA	NA	NA	rs62351463	0.11	0.11	0.088	0.0988419	0.0706	0.1915	0.0793	0.0635	0.0941	0.07	0.22	0.09	0.07	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.180574	NA	NA	NA	NA	NA	0.065	NA	3.9294
1259	12	112321322	112321322	A	G	intronic	MAPKAPK5	NA	NA	NA	intronic	ENSG00000089022	NA	NA	NA	NA	NA	12q24.13	NA	NA	NA	NA	rs75803132	0.04	0.04	0.038	0.0371406	0.0706	NA	0.0749	0.028	0.0266	0.06	NA	0.09	0.03	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.340849	NA	NA	NA	NA	NA	0.08	NA	3.9294
1259	12	112459849	112459849	C	T	intronic	ERP29	NA	NA	NA	intronic	ENSG00000089248	NA	NA	NA	NA	NA	12q24.13	NA	NA	NA	NA	rs80350869	0.05	0.05	0.049	0.0397364	0.0706	NA	0.072	0.0386	0.0276	0.06	NA	0.09	0.05	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.232361	NA	NA	NA	NA	NA	0.08	NA	3.9294
1259	13	111099045	111099045	C	G	intronic	COL4A2	NA	NA	NA	intronic	ENSG00000134871	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs59905747	0.15	0.15	0.133	0.122604	0.0706	0.2728	0.1643	0.0726	0.0593	0.07	0.3	0.15	0.09	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.017682	NA	NA	NA	NA	NA	0.101	NA	3.9294
1259	14	62299016	62299016	G	A	intergenic	SNAPC1,SYT16	dist=35870;dist=163525	NA	NA	ncRNA_exonic	ENSG00000258956	NA	NA	NA	NA	NA	14q23.2	NA	NA	NA	NA	rs72716755	0.07	0.07	0.057	0.0539137	0.0706	0.0357	0.062	0.0696	0.0286	0.07	0.05	0.07	0.07	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.381759	NA	NA	NA	NA	NA	0.123	NA	3.9294
1259	14	100188144	100188144	A	C	intronic	CYP46A1	NA	NA	NA	intronic	ENSG00000036530	NA	NA	NA	NA	NA	14q32.2	NA	NA	NA	NA	rs2273840	0.08	0.08	0.067	0.0804712	0.0706	0.1389	0.1254	0.0121	0.091	0.06	0.14	0.13	0.02	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.264631	NA	NA	NA	NA	NA	0.036	NA	3.9294
1259	14	105207642	105207642	C	T	intronic	ADSSL1	NA	NA	NA	intronic	ENSG00000185100	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs45463395	0.04	0.04	0.025	0.0507188	0.0706	0.0198	0.0346	0.0204	0.1145	0.07	0.03	0.04	0.02	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.190514	NA	NA	NA	NA	NA	0.043	NA	3.9294
1259	15	63044446	63044446	T	A	intronic	TLN2	NA	NA	NA	intronic	ENSG00000171914	NA	NA	NA	NA	NA	15q22.2	NA	NA	NA	NA	rs11638510	0.03	0.03	0.024	0.0219649	0.0706	NA	0.0288	0.003	0.0153	0.08	NA	0.03	0.01	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.187523	NA	NA	NA	NA	NA	NA	NA	3.9294
1259	17	42929659	42929659	G	C	intronic	EFTUD2	NA	NA	NA	intronic	ENSG00000108883	NA	NA	NA	NA	NA	17q21.31	NA	NA	NA	NA	rs56134215	0.04	0.04	0.029	0.0325479	0.0706	NA	0.0303	0.0356	0.0245	0.07	NA	0.04	0.04	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.202552	NA	NA	NA	NA	NA	0.036	NA	3.9294
1259	19	4333625	4333625	G	A	intronic	STAP2	NA	NA	NA	intronic	ENSG00000178078	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs73534895	0.12	0.12	0.135	0.135184	0.0706	NA	0.0836	0.3601	0.0736	0.07	NA	0.07	0.37	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.084876	NA	NA	NA	NA	NA	0.261	NA	3.9294
1259	19	9302143	9302143	A	G	intergenic	OR7D2,OR7D4	dist=2650;dist=22383	NA	NA	ncRNA_exonic	ENSG00000267775	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs116246092	0.12	0.12	NA	0.123203	0.0706	0.1022	0.0692	0.2489	0.0675	0.07	0.11	0.06	0.25	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.506124	NA	NA	NA	NA	NA	NA	NA	3.9294
1259	22	33679425	33679425	G	C	intronic	LARGE	NA	NA	NA	intronic	ENSG00000133424	NA	NA	NA	NA	NA	22q12.3	NA	NA	NA	NA	rs1018365	0.07	0.07	0.07	0.0702875	0.0706	0.001	0.0562	0.1762	0.0082	0.06	NA	0.05	0.15	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.197066	NA	NA	NA	NA	NA	0.101	NA	3.9294
1259	14	22591988	22591988	C	A	intergenic	OR4E2,DAD1	dist=457750;dist=441819	NA	NA	exonic	ENSG00000211807	NA	nonsynonymous SNV	ENSG00000211807:ENST00000390455:exon2:c.C73A:p.P25T	NA	NA	14q11.2	NA	NA	NA	NA	rs2272550	0.27	0.27	0.282	0.262181	0.3052	0.3244	0.1988	0.1331	0.3732	0.31	0.35	0.23	0.12	0.3008	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.873647	NA	1	0.298719	0.175994	NA	0.181	NA	3.9286144
1259	19	6477333	6477333	G	A	intronic	DENND1C	NA	NA	NA	intronic	ENSG00000205744	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs45574631	0.01	0.01	0.011	0.00898562	0.0268	NA	0.0159	0.0008	0.0061	0.02	NA	0.02	0.002	0.0204	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.578428	1.578428	NA	0.024219	0.003199	NA	0.022	NA	3.928581
1259	1	20828726	20828726	C	T	intronic	MUL1	NA	NA	NA	intronic	ENSG00000090432	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs79865810	0.02	0.02	0.012	0.0101837	0.0258	NA	0.0259	0.0023	0.0041	0.03	NA	0.04	0.01	0.0171	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.072083	NA	NA	0.028605	0.004766	NA	0.014	NA	3.928495
1259	3	125279444	125279444	T	C	intronic	OSBPL11	NA	NA	NA	intronic	ENSG00000144909	NA	NA	NA	NA	NA	3q21.2	NA	NA	NA	NA	rs12496976	0.05	0.05	0.042	0.0413339	0.0716	0.0347	0.0965	0.0045	0.0276	0.07	0.04	0.08	0.01	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.476709	NA	NA	NA	NA	NA	0.029	NA	3.9284
1259	4	56736773	56736773	C	T	intronic	EXOC1	NA	NA	NA	intronic	ENSG00000090989	NA	NA	NA	NA	NA	4q12	NA	NA	NA	NA	rs77829116	0.04	0.04	0.039	0.033147	0.0716	0.002	0.0288	0.0038	0.0685	0.08	0.0035	0.02	0.0041	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.391038	NA	NA	NA	NA	NA	0.072	NA	3.9284
1259	17	34305048	34305048	G	A	intronic	CCL16	NA	NA	NA	intronic	ENSG00000161573	NA	NA	NA	NA	NA	17q12	NA	NA	NA	NA	rs7216969	0.09	0.09	0.079	0.104034	0.0716	0.0694	0.1628	0.1611	0.0542	0.07	0.04	0.13	0.15	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.761666	NA	NA	NA	NA	NA	0.123	NA	3.9284
1259	17	34305071	34305071	C	A	intronic	CCL16	NA	NA	NA	intronic	ENSG00000161573	NA	NA	NA	NA	NA	17q12	NA	NA	NA	NA	rs11080368	0.09	0.09	0.084	0.104034	0.0716	0.0694	0.1628	0.1611	0.0542	0.07	0.04	0.13	0.15	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.950757	NA	NA	NA	NA	NA	0.123	NA	3.9284
1259	22	43023535	43023535	A	G	intronic	CYB5R3	NA	NA	NA	intronic	ENSG00000100243	NA	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs137137	0.24	0.24	0.218	0.234625	0.0716	0.6647	0.1138	0.1188	0.2014	0.07	0.64	0.11	0.12	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.586979	NA	NA	NA	NA	NA	0.109	NA	3.9284
1259	16	570557	570557	T	C	exonic	RAB11FIP3	NA	synonymous SNV	RAB11FIP3:NM_001142272:exon11:c.T1227C:p.S409S,RAB11FIP3:NM_014700:exon13:c.T2115C:p.S705S	exonic	ENSG00000090565	NA	synonymous SNV	ENSG00000090565:ENST00000450428:exon11:c.T1227C:p.S409S,ENSG00000090565:ENST00000262305:exon13:c.T2115C:p.S705S,ENSG00000090565:ENST00000434585:exon14:c.T1878C:p.S626S,ENSG00000090565:ENST00000457159:exon14:c.T2250C:p.S750S	NA	NA	16p13.3	NA	NA	NA	NA	rs11537754	0.75	0.75	0.75	0.790935	0.5398	0.9911	0.6902	0.8381	0.8507	0.56	0.99	0.68	0.84	0.659	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.188983	NA	NA	0.539535	0.761245	NA	0.543	NA	3.9283316
1259	1	223178561	223178561	A	C	exonic	DISP1	NA	synonymous SNV	DISP1:NM_032890:exon10:c.A3822C:p.P1274P	exonic	ENSG00000154309	NA	synonymous SNV	ENSG00000154309:ENST00000284476:exon8:c.A3822C:p.P1274P	NA	NA	1q41	NA	NA	NA	NA	rs9441941	0.52	0.52	0.505	0.498003	0.6163	0.4782	0.5346	0.4153	0.4826	0.6	0.48	0.56	0.42	0.5453	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.15137	NA	NA	0.576744	0.453246	ID=COSM146786;OCCURENCE=1(stomach)	0.471	NA	3.9283226
1259	15	41275014	41275014	T	G	intronic	INO80	NA	NA	NA	intronic	ENSG00000128908	NA	NA	NA	NA	NA	15q15.1	NA	Name=CTCF	NA	NA	rs7173954	0.25	0.25	0.248	0.243411	0.3797	0.0069	0.2493	0.3321	0.2229	0.39	0.01	0.25	0.33	0.3145	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.094699	NA	NA	0.377482	0.326818	NA	0.297	NA	3.928318
1259	14	101423634	101423634	T	C	downstream	SNORD114-6	NA	NA	NA	ncRNA_intronic	ENSG00000225746	NA	NA	NA	NA	NA	14q32.31	NA	NA	NA	NA	rs12887775	0.11	0.11	0.095	0.091254	0.2386	0.0119	0.1412	0.0121	0.093	0.24	0.01	0.17	0.01	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.336981	NA	NA	NA	NA	NA	0.138	NA	3.9280666
1259	1	156503560	156503560	C	T	intronic	IQGAP3	NA	NA	NA	intronic	ENSG00000183856	NA	NA	NA	NA	NA	1q23.1	NA	NA	NA	NA	rs41267377	0.02	0.02	0.008	0.0107827	0.0258	NA	0.0303	0.0008	0.0061	0.03	NA	0.04	0.002	0.0191	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.39838	NA	NA	0.027093	0.003404	NA	0.022	NA	3.928007
1259	17	7700687	7700687	C	T	intronic	DNAH2	NA	NA	NA	intronic	ENSG00000183914	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs118044889	0.01	0.01	0.01	0.00778754	0.0338	NA	0.0072	NA	NA	0.03	NA	0.0028	NA	0.0162	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.067476	NA	NA	0.022093	0.002724	NA	0.007	NA	3.927907
1259	11	86868466	86868466	A	T	intronic	TMEM135	NA	NA	NA	intronic	ENSG00000166575	NA	NA	NA	NA	NA	11q14.2	NA	NA	NA	NA	rs79262699	0.01	0.01	0.01	0.0159744	0.0239	0.002	0.0346	0.0008	0.0297	0.03	0.0017	0.02	NA	0.0246	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.905213	1.905213	NA	0.023726	0.004543	NA	0.014	NA	3.927774
1259	19	42267632	42267632	T	C	intronic	CEACAM6	NA	NA	NA	ncRNA_intronic	ENSG00000268833	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs1971787	0.51	0.51	0.501	0.513778	0.4056	0.5625	0.5317	0.6157	0.4243	0.41	0.58	0.49	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.162621	NA	NA	NA	NA	NA	0.442	NA	3.9277333
1259	19	42267670	42267670	G	C	intronic	CEACAM6	NA	NA	NA	ncRNA_intronic	ENSG00000268833	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs8105477	0.51	0.51	0.486	0.508586	0.4056	0.5625	0.5317	0.5961	0.4243	0.41	0.58	0.49	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.610298	NA	NA	NA	NA	NA	0.435	NA	3.9277333
1259	19	42267724	42267724	T	C	intronic	CEACAM6	NA	NA	NA	ncRNA_intronic	ENSG00000268833	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs8106277	0.54	0.54	0.535	0.552117	0.4056	0.5625	0.5519	0.7504	0.4243	0.41	0.58	0.51	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.786258	NA	NA	NA	NA	NA	0.507	NA	3.9277333
1259	17	18542074	18542074	G	A	intronic	TBC1D28	NA	NA	NA	intronic	ENSG00000189375	NA	NA	NA	Score=321;Name=lod=27	NA	17p11.2	NA	NA	NA	NA	rs9908833	0.69	0.69	0.689	0.709265	0.5487	0.9583	0.6441	0.7095	0.6636	0.53	0.94	0.64	0.7	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.701605	NA	NA	0.52357	0.710983	NA	0.377	NA	3.92773
1259	2	98414015	98414015	T	C	intronic	TMEM131	NA	NA	NA	intronic	ENSG00000075568	NA	NA	NA	NA	NA	2q11.2	NA	NA	NA	NA	rs79297691	0.04	0.04	0.039	0.0449281	0.0239	NA	0.036	0.1324	0.001	0.02	NA	0.04	0.12	0.0248	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.439056	NA	NA	0.0236	0.088859	NA	0.036	NA	3.9277
1259	8	27641466	27641466	A	G	intronic	ESCO2	NA	NA	NA	intronic	ENSG00000171320	NA	NA	NA	NA	NA	8p21.1	NA	NA	NA	NA	rs138021116	0.01	0.01	0.01	0.0219649	0.0268	NA	0.0259	0.0015	0.0644	0.02	NA	0.04	0.0041	0.0246	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.114039	NA	NA	0.020935	0.003404	NA	NA	NA	3.927665
1259	1	16343815	16343815	C	A	intronic	HSPB7	NA	NA	NA	intronic	ENSG00000173641	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs1739845	0.07	0.07	0.046	0.0848642	0.0726	0.0833	0.0591	0.0522	0.1616	0.08	0.05	0.06	0.07	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.509095	NA	NA	NA	NA	NA	0.043	NA	3.9274
1259	1	150970811	150970811	G	C	intronic	FAM63A	NA	NA	NA	intronic	ENSG00000143409	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs74602660	0.15	0.15	0.16	0.153554	0.0726	0.1587	0.0764	0.2965	0.093	0.07	0.17	0.07	0.31	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.273415	NA	NA	NA	NA	NA	0.116	NA	3.9274
1259	2	7136981	7136981	C	T	intronic	RNF144A	NA	NA	NA	intronic	ENSG00000151692	NA	NA	NA	NA	NA	2p25.1	NA	NA	NA	NA	rs11689407	0.06	0.06	0.065	0.0816693	0.0726	NA	0.0288	0.1339	0.1421	0.07	NA	0.04	0.14	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.487521	NA	NA	NA	NA	NA	0.13	NA	3.9274
1259	6	17284760	17284760	A	G	intronic	RBM24	NA	NA	NA	intronic	ENSG00000112183	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs3763175	0.08	0.08	0.072	0.0746805	0.0726	0.1677	0.0461	0.0182	0.0777	0.07	0.17	0.05	0.01	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.667843	NA	NA	NA	NA	NA	0.087	NA	3.9274
1259	7	5922322	5922322	C	A	intronic	OCM	NA	NA	NA	intronic	ENSG00000122543	NA	NA	NA	NA	NA	7p22.1	NA	NA	NA	NA	rs41280705	0.06	0.06	0.042	0.0623003	0.0726	0.0585	0.0706	0.0174	0.1104	0.07	0.06	0.08	0.02	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.526753	1.526753	NA	NA	NA	NA	0.043	NA	3.9274
1259	11	124956298	124956298	C	T	intronic	SLC37A2	NA	NA	NA	intronic	ENSG00000134955	NA	NA	NA	NA	NA	11q24.2	NA	NA	NA	NA	rs3808996	0.19	0.19	0.161	0.179912	0.0726	0.4722	0.1254	0.0257	0.2362	0.09	0.5	0.12	0.04	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.449209	NA	NA	NA	NA	NA	0.065	NA	3.9274
1259	2	163124104	163124104	C	T	intronic	IFIH1	NA	NA	NA	intronic	ENSG00000115267	NA	NA	NA	NA	NA	2q24.2	NA	NA	NA	NA	rs36070180	0.01	0.01	0.009	0.00678914	0.0229	NA	0.0115	0.0008	0.002	0.02	NA	0.01	NA	0.0196	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.427655	NA	NA	0.030123	0.005447	NA	0.007	NA	3.927377
1259	9	79843002	79843002	A	G	intronic	VPS13A	NA	NA	NA	intronic	ENSG00000197969	NA	NA	NA	NA	NA	9q21.2	NA	NA	NA	NA	rs72742592	0.01	0.01	0.008	0.00698882	0.0219	NA	0.0086	0.0015	0.0051	0.02	NA	0.01	0.002	0.0249	0.026	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.949451	NA	NA	0.025933	0.00413	NA	NA	NA	3.927267
1259	7	28319234	28319234	A	C	intergenic	JAZF1-AS1,CREB5	dist=38238;dist=19706	NA	NA	ncRNA_exonic	ENSG00000174495	NA	NA	NA	Score=462;Name=lod=101	NA	7p15.1	NA	NA	NA	NA	rs177484	0.66	0.66	0.644	0.695487	0.5447	0.7063	0.6282	0.8585	0.6667	0.55	0.69	0.6	0.83	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.839228	NA	NA	0.528284	0.806358	NA	0.543	NA	3.927016
1259	2	179258923	179258923	C	T	ncRNA_intronic	MIR548N	NA	NA	NA	intronic	ENSG00000079156	NA	NA	NA	NA	NA	2q31.2	NA	NA	NA	NA	rs919177	0.54	0.54	0.526	0.578874	0.4066	0.7431	0.6383	0.5393	0.5982	0.41	0.73	0.57	0.51	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.935823	NA	NA	NA	NA	NA	0.486	NA	3.9267333
1259	5	176308657	176308657	C	T	intronic	HK3	NA	NA	NA	intronic	ENSG00000160883	NA	NA	NA	NA	NA	5q35.2	NA	NA	NA	NA	rs146173758	0.01	0.01	0.005	0.0169728	0.0229	0.001	0.0173	0.0008	0.0491	0.03	NA	0.02	NA	0.0261	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.415479	NA	NA	0.024302	0.004312	NA	NA	NA	3.926698
1259	6	128040676	128040676	A	G	intronic	THEMIS	NA	NA	NA	intronic	ENSG00000172673	NA	NA	NA	NA	NA	6q22.33	NA	NA	NA	NA	rs11758347	0.03	0.03	0.026	0.0253594	0.0736	NA	0.0331	0.0068	0.0215	0.07	NA	0.04	0.01	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5218	NA	NA	NA	NA	NA	0.007	NA	3.9264
1259	11	56785625	56785625	G	T	intergenic	OR5AK2,OR5AK4P	dist=28307;dist=19384	NA	NA	ncRNA_exonic	ENSG00000255083	NA	NA	NA	NA	NA	11q12.1	NA	NA	NA	NA	rs10792074	0.12	0.12	0.11	0.119808	0.0736	0.3413	0.0749	0.0242	0.1002	0.07	0.31	0.05	0.03	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.733315	NA	NA	NA	NA	NA	0.152	NA	3.9264
1259	14	20873540	20873540	G	A	intronic	TEP1	NA	NA	NA	intronic	ENSG00000129566	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs111675106	NA	NA	NA	0.0974441	0.0736	0.1012	0.0807	0.1188	0.1012	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.854875	NA	NA	NA	NA	NA	NA	NA	3.9264
1259	5	95116141	95116141	A	T	intronic	RHOBTB3	NA	NA	NA	intronic	ENSG00000164292,ENSG00000173221	NA	NA	NA	NA	NA	5q15	NA	NA	NA	NA	rs55706606	0.02	0.02	0.016	0.0457268	0.0249	0.0228	0.0144	0.0401	0.1207	0.03	0.01	0.01	0.03	0.0314	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.319612	NA	NA	0.017674	0.042215	NA	0.043	NA	3.926026
1259	3	57658222	57658222	A	T	intronic	DENND6A	NA	NA	NA	intronic	ENSG00000174839	NA	NA	NA	NA	NA	3p14.3	NA	NA	NA	NA	rs1473367	0.02	0.02	0.011	0.0151757	0.0398	NA	0.0259	0.0023	0.0153	0.04	NA	0.02	0.002	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.293483	1.293483	NA	0.034342	0.004335	NA	0.022	NA	3.925858
1259	17	41330024	41330024	T	C	intronic	NBR1	NA	NA	NA	intronic	ENSG00000188554	NA	NA	NA	Score=582;Name=lod=308	NA	17q21.31	NA	NA	NA	NA	rs11657883	0.3	0.3	0.277	0.336062	0.3579	0.371	0.3631	0.1566	0.501	0.36	0.33	0.38	0.13	0.3905	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.273862	NA	NA	0.32583	0.187639	ID=COSM148281;OCCURENCE=1(stomach)	0.254	NA	3.92577
1259	1	16356870	16356870	G	A	intronic	CLCNKA	NA	NA	NA	intronic	ENSG00000186510	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs9442191	0.08	0.08	0.086	0.105232	0.0746	0.0992	0.062	0.1142	0.1616	0.08	0.07	0.06	0.12	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.374791	NA	NA	NA	NA	NA	0.065	NA	3.9254
1259	2	29543514	29543514	C	T	intronic	ALK	NA	NA	NA	intronic	ENSG00000171094	NA	NA	NA	NA	NA	2p23.2	NA	NA	NA	NA	rs12151564	0.06	0.06	0.049	0.0726837	0.0746	0.0417	0.0634	0.0605	0.1258	0.08	0.04	0.07	0.05	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.318733	NA	NA	NA	NA	NA	0.065	NA	3.9254
1259	2	118575414	118575414	C	T	intronic	DDX18	NA	NA	NA	intronic	ENSG00000088205	NA	NA	NA	NA	NA	2q14.1	NA	NA	NA	NA	rs72834313	0.03	0.03	0.03	0.0303514	0.0746	NA	0.0317	0.0023	0.0532	0.07	NA	0.04	0.0041	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.236753	NA	NA	NA	NA	NA	0.065	NA	3.9254
1259	2	118582817	118582817	G	C	intronic	DDX18	NA	NA	NA	intronic	ENSG00000088205	NA	NA	NA	NA	NA	2q14.1	NA	NA	NA	NA	rs72834319	0.03	0.03	0.024	0.0303514	0.0746	NA	0.0317	0.0023	0.0532	0.07	NA	0.04	0.0041	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.356985	NA	NA	NA	NA	NA	0.065	NA	3.9254
1259	2	165559856	165559856	A	G	intronic	COBLL1	NA	NA	NA	intronic	ENSG00000082438	NA	NA	NA	NA	NA	2q24.3	NA	NA	NA	NA	rs35492512	0.06	0.06	0.061	0.0565096	0.0746	0.0327	0.0562	0.0635	0.0532	0.07	0.04	0.07	0.07	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.160686	NA	NA	NA	NA	NA	0.065	NA	3.9254
1259	2	175335365	175335365	A	G	intronic	GPR155	NA	NA	NA	intronic	ENSG00000163328	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	rs56101059	0.03	0.03	0.027	0.0217652	0.0746	NA	0.0375	0.0008	0.0072	0.07	NA	0.04	0.002	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.46086	NA	NA	NA	NA	NA	0.022	NA	3.9254
1259	4	79258775	79258775	G	A	intronic	FRAS1	NA	NA	NA	intronic	ENSG00000138759	NA	NA	NA	NA	NA	4q21.21	NA	NA	NA	NA	rs10010238	0.1	0.1	0.124	0.0982428	0.0746	0.0575	0.0562	0.1997	0.0573	0.08	0.06	0.06	0.2	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.093614	NA	NA	NA	NA	NA	0.138	NA	3.9254
1259	6	26598418	26598418	A	T	intronic	ABT1	NA	NA	NA	intronic	ENSG00000146109	NA	NA	NA	NA	NA	6p22.2	NA	NA	NA	NA	rs7768682	0.06	0.06	0.064	0.0706869	0.0746	0.0179	0.0735	0.09	0.093	0.07	0.01	0.07	0.08	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.218925	NA	NA	NA	NA	NA	0.065	NA	3.9254
1259	8	139636119	139636119	C	T	intronic	COL22A1	NA	NA	NA	intronic	ENSG00000169436	NA	NA	NA	NA	NA	8q24.23	NA	NA	NA	NA	rs57299725	0.07	0.07	0.082	0.067492	0.0746	0.0208	0.0634	0.1339	0.0215	0.07	0.02	0.08	0.15	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.65393	NA	NA	NA	NA	NA	0.152	NA	3.9254
1259	12	27470489	27470489	T	C	intronic	STK38L	NA	NA	NA	intronic	ENSG00000211455	NA	NA	NA	NA	NA	12p11.23	NA	NA	NA	NA	rs75908625	0.04	0.04	0.045	0.0359425	0.0746	0.0347	0.0375	0.0038	0.0399	0.08	0.04	0.03	0.002	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.306197	NA	NA	NA	NA	NA	0.101	NA	3.9254
1259	16	4038906	4038906	C	T	intronic	ADCY9	NA	NA	NA	intronic	ENSG00000162104	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs2072342	0.1	0.1	0.096	0.0888578	0.0746	0.2014	0.0461	0.0333	0.093	0.08	0.2	0.07	0.05	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.485467	NA	NA	NA	NA	NA	0.051	NA	3.9254
1259	5	176308655	176308655	C	A	intronic	HK3	NA	NA	NA	intronic	ENSG00000160883	NA	NA	NA	NA	NA	5q35.2	NA	NA	NA	NA	rs141653594	0.02	0.02	0.011	0.0217652	0.0229	0.001	0.0173	0.0189	0.0491	0.03	NA	0.02	0.02	0.0271	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.032483	NA	NA	0.024651	0.015207	NA	0.007	NA	3.925349
1259	6	33179376	33179376	T	G	intronic	RING1	NA	NA	NA	intronic	ENSG00000204227	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs9469382	0.03	0.03	0.027	0.0313498	0.0368	0.0129	0.0288	0.0303	0.0481	0.03	0.01	0.04	0.04	0.0379	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.455533	NA	NA	NA	NA	NA	0.065	NA	3.9253
1260	1	248112627	248112627	T	C	exonic	OR2L8	NA	synonymous SNV	OR2L8:NM_001001963:exon1:c.T468C:p.C156C	exonic	ENSG00000196936	NA	synonymous SNV	ENSG00000196936:ENST00000357191:exon1:c.T468C:p.C156C	NA	NA	1q44	NA	NA	NA	NA	rs4925787	0.46	0.46	0.332	0.411941	0.6103	0.4385	0.549	0.0893	0.5194	0.64	0.46	0.54	0.11	0.5293	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.29299	NA	NA	0.602093	0.187472	NA	0.5	NA	3.9249736
1260	6	44107559	44107559	G	A	intronic	TMEM63B	NA	NA	NA	intronic	ENSG00000137216	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs72858118	0.14	0.14	0.12	0.122005	0.0477	0.2242	0.1527	0.1172	0.0777	0.05	0.26	0.13	0.13	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.484805	NA	NA	0.027341	0.085983	NA	0.101	NA	3.924959
1260	7	6875212	6875212	C	T	intergenic	CCZ1B,LOC100131257	dist=9286;dist=240189	NA	NA	intergenic	ENSG00000146574,ENSG00000155070	dist=8811;dist=19904	NA	NA	Score=409;Name=lod=61	NA	7p22.1	NA	NA	NA	NA	rs4724863	NA	NA	0.327	0.464257	0.4085	0.4762	0.4957	0.3457	0.6472	NA	NA	NA	NA	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.65573	NA	NA	NA	NA	NA	0.29	NA	3.9248334
1260	1	115600081	115600081	G	C	intronic	TSPAN2	NA	NA	NA	intronic	ENSG00000134198	NA	NA	NA	NA	NA	1p13.2	NA	NA	NA	NA	rs3820630	0.08	0.08	0.08	0.0922524	0.0755	0.0149	0.0821	0.1974	0.0542	0.06	0.02	0.09	0.18	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.025942	2.025942	NA	NA	NA	NA	0.13	NA	3.9245
1260	1	201030988	201030988	C	T	intronic	CACNA1S	NA	NA	NA	intronic	ENSG00000081248	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs61614423	0.11	0.11	0.126	0.111222	0.0755	0.0675	0.1009	0.2088	0.0685	0.08	0.07	0.09	0.24	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.449792	NA	NA	NA	NA	NA	0.123	NA	3.9245
1260	1	244747339	244747339	G	A	intronic	C1orf101	NA	NA	NA	intronic	ENSG00000179397	NA	NA	NA	NA	NA	1q44	NA	NA	NA	NA	rs6429490	0.24	0.24	0.217	0.259984	0.0755	0.372	0.2378	0.3911	0.1728	0.07	0.36	0.23	0.37	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.035024	NA	NA	NA	NA	NA	0.138	NA	3.9245
1260	11	10500334	10500334	T	C	intronic	AMPD3	NA	NA	NA	intronic	ENSG00000133805	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs36106536	0.03	0.03	0.025	0.0229633	0.0755	NA	0.0346	0.003	0.0112	0.07	NA	0.04	0.01	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.669214	NA	NA	NA	NA	NA	0.014	NA	3.9245
1260	11	10503411	10503411	G	A	intronic	AMPD3	NA	NA	NA	intronic	ENSG00000133805	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs11042835	0.03	0.03	0.03	0.0231629	0.0755	NA	0.0346	0.003	0.0123	0.07	NA	0.04	0.01	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.436238	NA	NA	NA	NA	NA	0.014	NA	3.9245
1260	16	1573754	1573754	C	T	intronic	IFT140	NA	NA	NA	intronic	ENSG00000187535	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs78028801	0.14	0.14	0.119	0.16254	0.0755	0.2778	0.0677	0.1513	0.2157	0.08	0.26	0.07	0.12	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.594879	NA	NA	NA	NA	NA	0.13	NA	3.9245
1260	16	19522101	19522101	T	C	intronic	GDE1	NA	NA	NA	intronic	ENSG00000006007	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs2074171	0.25	0.25	0.236	0.243411	0.0755	0.3829	0.2579	0.3457	0.1237	0.07	0.38	0.21	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.769659	NA	NA	NA	NA	NA	0.225	NA	3.9245
1260	17	5437093	5437093	C	A	intronic	NLRP1	NA	NA	NA	intronic	ENSG00000091592	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs117114494	0.04	0.04	0.026	0.0249601	0.0755	0.001	0.049	0.0045	0.0082	0.07	NA	0.07	0.01	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.414335	NA	NA	NA	NA	NA	0.087	NA	3.9245
1260	19	15675000	15675000	C	T	intergenic	CYP4F22,CYP4F8	dist=11872;dist=51029	NA	NA	ncRNA_exonic	ENSG00000269516	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs111968805	0.04	0.04	0.034	0.0355431	0.0755	0.0089	0.0389	0.0038	0.0624	0.07	0.01	0.04	0.0041	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.250095	NA	NA	NA	NA	NA	0.036	NA	3.9245
1260	4	37651155	37651155	A	G	intronic	RELL1	NA	NA	NA	intronic	ENSG00000181826	NA	NA	NA	NA	Name=IgG glycosylation	4p14	NA	NA	NA	NA	rs2292298	0.31	0.31	0.306	0.298123	0.3668	0.3194	0.3069	0.2231	0.3006	0.37	0.31	0.3	0.24	0.3315	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.84356	NA	NA	0.37758	0.238791	NA	0.275	NA	3.92412
1260	12	52699213	52699213	G	T	intronic	KRT86	NA	NA	NA	intronic	ENSG00000170442	NA	NA	NA	NA	NA	12q13.13	NA	Name=Pol2	NA	NA	rs12832364	0.3	0.3	0.293	0.319489	0.3648	0.1726	0.2911	0.3533	0.3988	0.35	0.17	0.3	0.38	0.3414	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.004126	NA	NA	0.369884	0.363141	ID=COSN164254;OCCURENCE=1(breast)	0.319	NA	3.923916
1260	19	41351843	41351843	G	A	intronic	CYP2A6	NA	NA	NA	intronic	ENSG00000255974,ENSG00000268797	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs28399451	0.05	0.05	0.039	0.0551118	0.0209	NA	0.0317	0.1687	0.0102	0.02	NA	0.05	0.14	0.0333	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.540481	NA	NA	0.021992	0.146618	NA	0.051	NA	3.923808
1260	3	105252398	105252398	A	C	intronic	ALCAM	NA	NA	NA	intronic	ENSG00000170017	NA	NA	NA	NA	NA	3q13.11	NA	NA	NA	NA	rs148287455	0.01	0.01	0.008	0.00838658	0.0298	NA	0.013	0.0008	0.002	0.03	NA	0.01	0.002	0.0204	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.064289	NA	NA	0.026163	0.004993	NA	0.014	NA	3.923637
1260	1	119988688	119988688	G	A	intergenic	HSD3B2,HSD3B1	dist=23026;dist=61138	NA	NA	ncRNA_exonic	ENSG00000203858	NA	NA	NA	NA	NA	1p12	NA	NA	NA	NA	rs11802681	0.14	0.14	0.135	0.159944	0.0765	0.0625	0.1513	0.3162	0.1411	0.07	0.05	0.16	0.32	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.753245	NA	NA	NA	NA	NA	0.188	NA	3.9235
1260	1	43777855	43777855	C	T	intronic	TIE1	NA	NA	NA	intronic	ENSG00000066056	NA	NA	NA	NA	NA	1p34.2	NA	NA	NA	NA	rs35909386	0.03	0.03	0.032	0.0275559	0.0765	NA	0.036	0.0061	0.0286	0.07	NA	0.05	0.01	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.15625	NA	NA	NA	NA	NA	0.022	NA	3.9235
1260	4	71388666	71388666	C	T	intronic	AMTN	NA	NA	NA	intronic	ENSG00000187689	NA	NA	NA	NA	NA	4q13.3	NA	NA	NA	NA	rs17149005	0.08	0.08	0.084	0.0826677	0.0765	NA	0.0519	0.2103	0.0235	0.08	NA	0.06	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.525625	NA	NA	NA	NA	NA	0.21	NA	3.9235
1260	7	151073093	151073093	C	T	intronic	NUB1	NA	NA	NA	intronic	ENSG00000013374	NA	NA	NA	NA	NA	7q36.1	NA	NA	NA	NA	rs731995	0.14	0.14	0.103	0.140176	0.0765	0.3383	0.2435	0.0106	0.1033	0.07	0.31	0.19	0.01	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.389118	NA	NA	NA	NA	NA	0.159	NA	3.9235
1260	11	1587168	1587168	C	T	intronic	DUSP8,MOB2	NA	NA	NA	intronic	ENSG00000184545	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs79838852	0.04	0.04	0.03	0.0251597	0.0765	0.002	0.0389	0.0008	0.0194	0.08	NA	0.05	NA	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.52871	NA	NA	NA	NA	NA	0.043	NA	3.9235
1260	14	65209610	65209610	C	G	intronic	PLEKHG3	NA	NA	NA	intronic	ENSG00000126822	NA	NA	NA	NA	NA	14q23.3	NA	NA	NA	NA	rs7161278	0.04	0.04	0.037	0.0399361	0.0765	0.0357	0.0202	0.0068	0.0654	0.08	0.03	0.02	0.01	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.949499	NA	NA	NA	NA	NA	0.022	NA	3.9235
1260	14	105238636	105238636	G	C	intronic	AKT1	NA	NA	NA	intronic	ENSG00000142208	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs17846832	0.04	0.04	0.038	0.0541134	0.0765	0.0179	0.0346	0.0212	0.1268	0.08	0.03	0.04	0.01	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.408539	NA	NA	NA	NA	NA	0.029	NA	3.9235
1260	5	147261557	147261557	T	G	intronic	SCGB3A2	NA	NA	NA	intronic	ENSG00000164265	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs6890965	0.06	0.06	0.061	0.0690895	0.0179	0.001	0.0288	0.2057	0.0358	0.02	NA	0.02	0.21	0.0368	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.557291	1.557291	NA	0.02186	0.189968	NA	0.188	NA	3.92344
1260	6	44144092	44144092	C	T	intronic	CAPN11	NA	NA	NA	intronic	ENSG00000137225	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs58342131	0.06	0.06	0.069	0.0798722	0.0169	0.001	0.0346	0.2504	0.0276	0.02	NA	0.03	0.23	0.0401	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.257743	NA	NA	0.019565	0.21999	NA	0.145	NA	3.923435
1260	2	179203797	179203797	G	A	exonic	OSBPL6	NA	synonymous SNV	OSBPL6:NM_145739:exon8:c.G807A:p.S269S,OSBPL6:NM_001201480:exon10:c.G870A:p.S290S,OSBPL6:NM_001201481:exon10:c.G870A:p.S290S,OSBPL6:NM_001201482:exon10:c.G870A:p.S290S,OSBPL6:NM_032523:exon10:c.G870A:p.S290S	exonic	ENSG00000079156	NA	synonymous SNV	ENSG00000079156:ENST00000315022:exon8:c.G807A:p.S269S,ENSG00000079156:ENST00000409631:exon9:c.G870A:p.S290S,ENSG00000079156:ENST00000190611:exon10:c.G870A:p.S290S,ENSG00000079156:ENST00000357080:exon10:c.G870A:p.S290S,ENSG00000079156:ENST00000359685:exon10:c.G870A:p.S290S,ENSG00000079156:ENST00000392505:exon10:c.G870A:p.S290S,ENSG00000079156:ENST00000409045:exon10:c.G870A:p.S290S	Score=673;Name=lod=725	NA	2q31.2	NA	NA	NA	NA	rs1434087	0.92	0.92	0.915	0.920927	0.9026	0.9663	0.9395	0.8714	0.9468	0.9	0.97	0.93	0.87	0.9283	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.262578	1.262578	NA	0.912442	0.890604	NA	0.899	NA	3.9233246
1260	19	41351169	41351169	C	T	intronic	CYP2A6	NA	NA	NA	intronic	ENSG00000255974,ENSG00000268797	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs4803380	0.05	0.05	0.047	0.0551118	0.0209	NA	0.0317	0.1687	0.0102	0.02	NA	0.05	0.13	0.0335	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.562715	NA	NA	0.022326	0.144803	NA	0.036	NA	3.923274
1260	6	109815351	109815351	T	C	intronic	AK9	NA	NA	NA	ncRNA_intronic	ENSG00000223537	NA	NA	NA	NA	NA	6q21	NA	NA	NA	NA	rs7755941	0.4	0.4	0.38	0.380591	0.4105	0.378	0.4107	0.2814	0.4652	0.41	0.45	0.41	0.3	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.776772	1.776772	NA	NA	NA	NA	0.348	NA	3.9228333
1260	14	23459156	23459156	G	A	intronic	C14orf93	NA	NA	NA	ncRNA_exonic	ENSG00000258457	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs11624528	0.31	0.31	0.294	0.282348	0.4105	0.1915	0.33	0.2352	0.274	0.41	0.22	0.34	0.25	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.720019	1.720019	NA	NA	NA	NA	0.297	NA	3.9228333
1260	5	175798945	175798945	A	C	UTR3	ARL10	NM_173664:c.*47A>C	NA	NA	UTR3	ENSG00000175414	ENST00000310389:c.*47A>C	NA	NA	NA	NA	5q35.2	NA	NA	NA	NA	rs10214381	0.08	0.08	0.072	0.0545128	0.1461	0.001	0.0749	0.0393	0.0215	0.15	NA	0.1	0.03	0.1118	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.467477	NA	NA	0.152791	0.05606	NA	0.029	NA	3.9226424
1260	5	147261236	147261236	C	G	intronic	SCGB3A2	NA	NA	NA	intronic	ENSG00000164265	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs6865419	0.1	0.1	0.116	NA	NA	NA	NA	NA	NA	0.02	NA	0.03	0.4	0.0554	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.146909	NA	NA	0.022093	0.333182	NA	0.246	NA	3.922507
1260	1	244724550	244724550	G	A	intronic	C1orf101	NA	NA	NA	intronic	ENSG00000179397	NA	NA	NA	NA	NA	1q44	NA	NA	NA	NA	rs12217134	0.26	0.26	0.243	0.27516	0.0775	0.3849	0.2464	0.4327	0.1728	0.07	0.37	0.23	0.42	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.554867	NA	NA	NA	NA	NA	0.239	NA	3.9225
1260	2	233749914	233749914	G	A	intronic	NGEF	NA	NA	NA	intronic	ENSG00000066248	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs80050391	0.08	0.08	0.053	0.112021	0.0775	0.1131	0.1052	0.025	0.2689	0.08	0.1	0.1	0.02	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.046683	NA	NA	NA	NA	NA	0.087	NA	3.9225
1260	3	142520900	142520900	G	A	intronic	TRPC1	NA	NA	NA	intronic	ENSG00000144935	NA	NA	NA	NA	NA	3q23	NA	NA	NA	NA	rs12634067	0.1	0.1	0.073	0.0848642	0.0775	0.1409	0.1888	0.0129	0.0583	0.08	0.15	0.17	0.02	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.119339	NA	NA	NA	NA	NA	0.043	NA	3.9225
1260	4	166978220	166978220	G	C	intronic	TLL1	NA	NA	NA	intronic	ENSG00000038295	NA	NA	NA	NA	NA	4q32.3	NA	NA	NA	NA	rs41280517	0.07	0.07	0.065	0.0513179	0.0775	0.125	0.0231	0.0129	0.0204	0.08	0.13	0.02	0.01	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.566513	NA	NA	NA	NA	NA	0.116	NA	3.9225
1260	7	133861905	133861905	A	G	intronic	LRGUK	NA	NA	NA	intronic	ENSG00000155530	NA	NA	NA	NA	NA	7q33	NA	NA	NA	NA	rs17167592	0.22	0.22	0.186	0.216853	0.0775	0.3849	0.3818	0.1672	0.137	0.06	0.38	0.32	0.18	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.554636	NA	NA	NA	NA	NA	0.123	NA	3.9225
1260	7	133868667	133868667	T	C	intronic	LRGUK	NA	NA	NA	intronic	ENSG00000155530	NA	NA	NA	NA	NA	7q33	NA	NA	NA	NA	rs6952909	0.22	0.22	0.185	0.216853	0.0775	0.3849	0.3818	0.1672	0.137	0.06	0.38	0.32	0.18	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.828521	NA	NA	NA	NA	NA	0.123	NA	3.9225
1260	9	3277260	3277260	A	G	intronic	RFX3	NA	NA	NA	intronic	ENSG00000080298	NA	NA	NA	NA	NA	9p24.2	NA	NA	NA	NA	rs2304929	0.15	0.15	0.131	0.127995	0.0775	0.3611	0.072	0.0008	0.1513	0.08	0.41	0.07	0.002	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.713529	1.713529	NA	NA	NA	NA	0.051	NA	3.9225
1260	10	101998052	101998052	A	G	intronic	CWF19L1	NA	NA	NA	intronic	ENSG00000095485	NA	NA	NA	NA	NA	10q24.31	NA	NA	NA	NA	rs3750709	0.22	0.22	0.223	0.251198	0.0775	0.1419	0.1326	0.5998	0.1554	0.09	0.15	0.13	0.56	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.094897	NA	NA	NA	NA	NA	0.181	NA	3.9225
1260	12	59307957	59307957	C	T	intronic	LRIG3	NA	NA	NA	intronic	ENSG00000139263	NA	NA	NA	NA	NA	12q14.1	NA	NA	NA	NA	rs11834094	0.14	0.14	0.109	0.171126	0.0775	0.2629	0.268	0.0983	0.2025	0.07	0.2	0.22	0.11	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.340065	NA	NA	NA	NA	ID=COSN164293;OCCURENCE=1(NS)	0.13	NA	3.9225
1260	14	99439648	99439648	G	A	intergenic	C14orf177,BCL11B	dist=255545;dist=195977	NA	NA	upstream	ENSG00000232573,ENSG00000234648	NA	NA	NA	Score=767;Name=lod=1738	NA	14q32.2	NA	NA	NA	NA	rs4905786	0.45	0.45	0.417	0.411542	0.5775	0.4881	0.562	0.1051	0.4693	0.56	0.49	0.57	0.14	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.545366	1.545366	NA	NA	NA	NA	0.42	NA	3.9225
1260	17	76129034	76129034	C	T	intronic	TMC8	NA	NA	NA	intronic	ENSG00000167895	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs60591028	0.09	0.09	0.084	0.0858626	0.0775	0.0843	0.0634	0.1309	0.0511	0.07	0.09	0.07	0.14	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.771508	NA	NA	NA	NA	NA	0.08	NA	3.9225
1260	11	60102350	60102350	C	T	upstream	MS4A6E	NA	NA	NA	UTR5	ENSG00000166926	ENST00000300182:c.-19C>T	NA	NA	NA	NA	11q12.2	NA	NA	NA	NA	rs76804792	0.01	0.01	0.011	0.00778754	0.0288	NA	0.0014	0.0008	0.0082	0.03	NA	NA	0.002	0.0202	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.701388	NA	NA	0.028605	0.004993	NA	NA	NA	3.922395
1260	1	89272962	89272962	T	G	intronic	PKN2	NA	NA	NA	intronic	ENSG00000065243	NA	NA	NA	NA	NA	1p22.2	NA	NA	NA	NA	rs11808481	0.04	0.04	0.038	0.0339457	0.0338	NA	0.0144	0.0855	0.0133	0.04	NA	0.02	0.1	0.0263	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.258697	1.258697	NA	0.017637	0.081889	NA	0.101	NA	3.922263
1260	1	76344826	76344826	G	A	intronic	MSH4	NA	NA	NA	intronic	ENSG00000057468	NA	NA	NA	NA	NA	1p31.1	NA	NA	NA	NA	rs5745450	0.05	0.05	0.045	0.0529153	0.0179	NA	0.0403	0.1619	0.0051	0.01	NA	0.04	0.16	0.03	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.844195	3.844195	NA	0.03	0.116538	NA	0.014	NA	3.9221
1260	7	47886707	47886707	G	A	intronic	PKD1L1	NA	NA	NA	intronic	ENSG00000136273,ENSG00000158683	NA	NA	NA	NA	NA	7p12.3	NA	Name=MafK_(ab50322)	NA	NA	rs10280228	0.33	0.33	0.311	0.339058	0.3509	0.119	0.3401	0.5492	0.2689	0.36	0.12	0.36	0.51	0.3807	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.730702	NA	NA	0.346628	0.516803	NA	0.304	NA	3.921772
1260	3	14942024	14942024	T	C	intronic	FGD5	NA	NA	NA	intronic	ENSG00000154783	NA	NA	NA	NA	NA	3p25.1	NA	Name=FOXA1_(SC-101058),FOXA2_(SC-6554),HNF4G_(SC-6558)	NA	NA	rs2307088	0.41	0.41	0.38	0.42472	0.5328	0.3016	0.4841	0.3253	0.5327	0.53	0.26	0.47	0.33	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.717409	NA	NA	0.545569	0.325145	NA	0.37	NA	3.921631
1260	1	3784464	3784464	G	A	intronic	DFFB	NA	NA	NA	intronic	ENSG00000169598	NA	NA	NA	NA	NA	1p36.32	NA	NA	NA	NA	rs72848469	0.13	0.13	0.14	0.151558	0.0785	0.002	0.0879	0.4153	0.0695	0.07	0.0017	0.1	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.840751	NA	NA	NA	NA	NA	0.145	NA	3.9215
1260	2	197710542	197710542	A	G	intronic	PGAP1	NA	NA	NA	intronic	ENSG00000197121	NA	NA	NA	NA	NA	2q33.1	NA	NA	NA	NA	rs16858898	0.11	0.11	0.111	0.134984	0.0785	0.0506	0.0793	0.2496	0.1646	0.08	0.06	0.09	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.725797	NA	NA	NA	NA	ID=COSN166368;OCCURENCE=1(urinary_tract),6(pancreas),15(large_intestine)	0.225	NA	3.9215
1260	8	28966870	28966870	C	T	intronic	KIF13B	NA	NA	NA	intronic	ENSG00000197892	NA	NA	NA	NA	NA	8p12	NA	NA	NA	NA	rs2291450	0.16	0.16	0.152	0.182109	0.0785	0.2401	0.2997	0.146	0.1943	0.08	0.23	0.27	0.13	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.051357	NA	NA	NA	NA	ID=COSN168296;OCCURENCE=1(large_intestine)	0.196	NA	3.9215
1260	10	45954807	45954807	A	G	intronic	MARCH8	NA	NA	NA	intronic	ENSG00000165406	NA	NA	NA	NA	NA	10q11.21	NA	NA	NA	NA	rs2279433	0.07	0.07	0.078	0.0501198	0.0785	0.0536	0.0317	0.0552	0.0235	0.08	0.06	0.05	0.09	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.927843	NA	NA	NA	NA	NA	0.014	NA	3.9215
1260	11	65792566	65792566	G	T	intronic	CATSPER1	NA	NA	NA	intronic	ENSG00000175294	NA	NA	NA	NA	NA	11q13.1	NA	NA	NA	NA	rs683191	0.04	0.04	0.037	0.0269569	0.0785	0.001	0.0461	0.0076	0.0133	0.08	NA	0.06	0.01	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.07316	NA	NA	NA	NA	NA	0.014	NA	3.9215
1260	12	26636911	26636911	C	A	intronic	ITPR2	NA	NA	NA	intronic	ENSG00000123104	NA	NA	NA	NA	NA	12p11.23	NA	NA	NA	NA	rs7303383	0.15	0.15	0.156	0.183906	0.0785	0.248	0.0749	0.2776	0.1769	0.08	0.23	0.1	0.22	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.034962	NA	NA	NA	NA	NA	0.145	NA	3.9215
1260	18	61156499	61156499	T	C	intronic	SERPINB5	NA	NA	NA	intronic	ENSG00000206075	NA	NA	NA	NA	NA	18q21.33	NA	NA	NA	NA	rs17071181	0.24	0.24	0.267	0.308506	0.0785	0.2222	0.1527	0.6301	0.3098	0.07	0.2	0.12	0.63	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.50236	NA	NA	NA	NA	NA	0.326	NA	3.9215
1260	20	46262994	46262994	G	A	intronic	NCOA3	NA	NA	NA	intronic	ENSG00000124151	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs6018606	0.1	0.1	0.123	0.102037	0.0785	0.0893	0.0735	0.1808	0.0532	0.08	0.08	0.06	0.19	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.350046	4.350046	NA	NA	NA	NA	0.152	NA	3.9215
1260	5	70930966	70930966	A	G	intronic	MCCC2	NA	NA	NA	intronic	ENSG00000131844	NA	NA	NA	NA	NA	5q13.2	NA	NA	NA	NA	rs277984	0.35	0.35	0.321	0.330072	0.3469	0.5248	0.5159	0.0862	0.3098	0.35	0.53	0.46	0.08	0.3673	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.470772	NA	NA	0.364302	0.141625	NA	0.283	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000082097.1;CLNDSDB=.;CLNDSDBID=.	3.921498
1260	17	30380381	30380381	A	G	UTR3	LRRC37B	NM_052888:c.*34A>G	NA	NA	UTR3	ENSG00000185158	ENST00000543378:c.*34A>G,ENST00000327564:c.*34A>G,ENST00000341671:c.*34A>G	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs17182434	0.07	0.07	0.067	0.0722843	0.1491	NA	0.0821	0.0053	0.1513	0.15	NA	0.09	0.01	0.1185	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.949721	NA	NA	0.144651	0.028597	NA	0.145	NA	3.9210824
1260	22	42908870	42908870	T	G	UTR3	RRP7A	NM_015703:c.*46A>C	NA	NA	UTR3	ENSG00000189306	ENST00000323013:c.*46A>C	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs9745	0.09	0.09	0.053	0.0764776	0.1461	0.003	0.1787	0.0582	0.0327	0.14	0.0017	0.19	0.05	0.1315	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.517578	NA	NA	0.134946	0.078756	NA	0.08	NA	3.9207874
1260	13	31513931	31513931	T	A	intronic	TEX26	NA	NA	NA	intronic	ENSG00000175664	NA	NA	NA	NA	NA	13q12.3	NA	NA	Name=2	NA	rs2225505	0.39	0.39	0.355	0.410543	0.3559	0.4464	0.3631	0.4758	0.3753	0.34	0.43	0.39	0.44	0.375	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.512855	NA	NA	0.348372	0.442578	NA	0.377	NA	3.920728
1260	19	49539586	49539586	G	A	intronic	CGB1	NA	NA	NA	intronic	ENSG00000267335,ENSG00000267631	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs117503795	0.02	0.02	0.01	0.0315495	0.0417	NA	0.1009	0.0015	0.045	0.03	NA	0.05	NA	0.0376	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.93299	NA	NA	NA	NA	NA	0.007	NA	3.9207
1260	20	62550824	62550824	G	A	ncRNA_exonic	MIR941-1	NA	NA	NA	intronic	ENSG00000101152	NA	NA	NA	NA	NA	20q13.33	NA	NA	NA	NA	rs2427556	0.39	0.39	0.48	0.455072	0.2227	0.7956	0.4352	0.5151	0.2761	0.2	0.64	0.35	0.41	0.19	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.393397	NA	NA	NA	NA	NA	NA	NA	3.9206333
1260	9	137659236	137659236	C	T	intronic	COL5A1	NA	NA	NA	intronic	ENSG00000130635	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs45622539	0.03	0.03	0.025	0.0305511	0.0278	0.0585	0.0173	0.0204	0.0276	0.03	0.05	0.02	0.01	0.0273	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.304245	NA	NA	0.024302	0.021335	NA	0.065	NA	3.920598
1260	1	114092278	114092278	A	G	intronic	MAGI3	NA	NA	NA	intronic	ENSG00000081026	NA	NA	NA	NA	NA	1p13.2	NA	NA	NA	NA	rs34297448	0.02	0.02	0.023	0.0175719	0.0268	0.0228	0.0187	0.0008	0.0245	0.03	0.03	0.02	0.002	0.023	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.05317	NA	NA	0.029651	0.004766	NA	0.014	NA	3.920549
1260	1	6196394	6196394	G	A	intronic	CHD5	NA	NA	NA	intronic	ENSG00000116254	NA	NA	NA	NA	NA	1p36.31	NA	NA	NA	NA	rs72632523	0.09	0.09	0.07	0.101837	0.0795	0.1567	0.1009	0.0106	0.1922	0.09	0.15	0.11	0.02	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.77744	NA	NA	NA	NA	NA	0.188	NA	3.9205
1260	1	23221855	23221855	A	G	intronic	EPHB2	NA	NA	NA	intronic	ENSG00000133216	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs77501996	0.04	0.04	0.042	0.0321486	0.0795	0.002	0.036	0.0038	0.0501	0.08	0.0017	0.05	0.01	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.549134	NA	NA	NA	NA	NA	0.014	NA	3.9205
1260	1	247323195	247323195	T	C	intronic	ZNF124	NA	NA	NA	intronic	ENSG00000196418	NA	NA	NA	NA	NA	1q44	NA	NA	NA	NA	rs4925786	0.1	0.1	0.086	0.0948482	0.0795	0.001	0.1686	0.1952	0.0194	0.08	0.0017	0.17	0.19	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.785091	NA	NA	NA	NA	NA	0.087	NA	3.9205
1260	3	184021628	184021628	A	C	intronic	PSMD2	NA	NA	NA	intronic	ENSG00000145191,ENSG00000175166	NA	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs9883929	0.09	0.09	0.033	0.096845	0.0795	0.0179	0.0548	0.2239	0.0542	0.08	0.03	0.06	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.398716	NA	NA	NA	NA	NA	0.051	NA	3.9205
1260	6	20128852	20128852	T	C	intronic	MBOAT1	NA	NA	NA	intronic	ENSG00000172197	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs77837628	0.05	0.05	0.06	0.0684904	0.0795	0.004	0.0476	0.0779	0.1258	0.08	0.0017	0.06	0.07	NA	0.087	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.369602	NA	NA	NA	NA	NA	0.058	NA	3.9205
1260	7	12269213	12269213	A	C	intronic	TMEM106B	NA	NA	NA	intronic	ENSG00000106460	NA	NA	NA	NA	NA	7p21.3	NA	NA	NA	NA	rs13234238	0.04	0.04	0.033	0.0279553	0.0795	NA	0.0533	0.0053	0.0164	0.08	NA	0.05	0.01	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.27362	2.27362	NA	NA	NA	NA	0.029	NA	3.9205
1260	7	18975650	18975650	A	G	intronic	HDAC9	NA	NA	NA	intronic	ENSG00000048052	NA	NA	NA	NA	NA	7p21.1	NA	NA	NA	NA	rs55653020	0.04	0.04	0.028	0.0305511	0.0795	NA	0.0562	0.0182	0.0102	0.07	NA	0.06	0.02	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.003491	NA	NA	NA	NA	NA	0.029	NA	3.9205
1260	7	133848076	133848076	A	C	intronic	LRGUK	NA	NA	NA	intronic	ENSG00000155530	NA	NA	NA	NA	NA	7q33	NA	NA	NA	NA	rs17167551	0.17	0.17	0.152	0.177516	0.0795	0.3234	0.1599	0.1619	0.1616	0.06	0.31	0.17	0.17	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.21725	2.21725	NA	NA	NA	NA	0.116	NA	3.9205
1260	9	36058750	36058750	A	G	intronic	RECK	NA	NA	NA	intronic	ENSG00000122707	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs78323948	0.15	0.15	0.125	0.129792	0.0795	0.2669	0.1225	0.0968	0.09	0.08	0.28	0.11	0.12	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.070807	NA	NA	NA	NA	NA	0.101	NA	3.9205
1260	10	43297746	43297746	T	C	intronic	BMS1	NA	NA	NA	intronic	ENSG00000165733	NA	NA	NA	NA	NA	10q11.21	NA	NA	NA	NA	rs41302251	0.05	0.05	0.038	0.0688898	0.0795	0.0258	0.1311	0.0068	0.1421	0.06	0.02	0.14	0.02	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.137922	NA	NA	NA	NA	NA	0.043	NA	3.9205
1260	8	143998677	143998677	G	A	intronic	CYP11B2	NA	NA	NA	intronic	ENSG00000179142	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs61757315	0.02	0.02	0.02	0.0189696	0.0239	0.001	0.0259	0.0121	0.0368	0.03	NA	0.02	0.01	0.0243	0.032	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.83785	NA	NA	0.031628	0.014072	NA	0.014	NA	3.920172
1260	19	39399277	39399277	C	T	intronic	NFKBIB	NA	NA	NA	UTR3	ENSG00000104825	ENST00000392079:c.*930C>T,ENST00000509705:c.*1693C>T	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs3136646	0.17	0.17	0.149	0.190895	0.2465	0.1657	0.2118	0.0477	0.3384	0.23	0.19	0.19	0.05	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.198433	NA	NA	NA	NA	NA	0.188	NA	3.9201667
1260	10	12240680	12240680	C	T	intronic	CDC123	NA	NA	NA	intronic	ENSG00000151465	NA	NA	NA	NA	NA	10p13	NA	NA	NA	NA	rs12775058	0.01	0.01	0.012	0.00978435	0.0318	NA	0.0072	0.0015	0.0102	0.03	NA	0.01	0.002	0.0194	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.467773	NA	NA	0.028754	0.006582	NA	NA	NA	3.920046
1260	11	6890946	6890946	A	G	upstream	OR10A2	NA	NA	NA	UTR5	ENSG00000170790	ENST00000307322:c.-40A>G	NA	NA	Score=278;Name=lod=18	NA	11p15.4	NA	NA	NA	NA	rs4758142	0.31	0.31	0.299	0.324281	0.3569	0.3135	0.3732	0.2073	0.4254	0.36	0.31	0.35	0.2	0.3529	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.207964	NA	NA	0.370228	0.199	NA	0.268	NA	3.919972
1260	7	6641667	6641667	G	T	intronic	C7orf26	NA	NA	NA	intronic	ENSG00000146576	NA	NA	NA	NA	NA	7p22.1	NA	NA	NA	NA	rs7789114	0.03	0.03	0.023	0.028155	0.0348	0.001	0.0288	0.0477	0.0225	0.04	NA	0.04	0.04	NA	0.045	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.191932	NA	NA	0.045255	0.038295	NA	0.014	NA	3.919945
1260	16	30390314	30390314	T	C	intronic	SEPT1,ZNF48	NA	NA	NA	intronic	ENSG00000180035,ENSG00000180096,ENSG00000270466	NA	NA	NA	NA	NA	16p11.2	NA	Name=HMGN3,Pol2,USF1_(SC-8983),HEY1,ZBTB7A_(SC-34508),Egr-1,Pol2-4H8	Name=105	NA	rs12447833	0.82	0.82	0.77	0.819888	0.673	0.9127	0.7939	0.9372	0.7352	0.69	0.91	0.79	0.92	0.7261	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.474523	1.474523	NA	0.681073	0.891059	NA	0.725	NA	3.919827
1260	6	80910571	80910571	G	A	intronic	BCKDHB	NA	NA	NA	intronic	ENSG00000083123	NA	NA	NA	NA	NA	6q14.1	NA	NA	NA	NA	rs9688535	0.06	0.06	0.063	0.0764776	0.0805	0.0119	0.0389	0.1233	0.1022	0.08	0.01	0.05	0.11	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.903749	NA	NA	NA	NA	NA	0.13	NA	3.9195
1260	8	41577121	41577121	C	G	intronic	ANK1	NA	NA	NA	intronic	ENSG00000029534	NA	NA	NA	NA	NA	8p11.21	NA	NA	NA	NA	rs7823698	0.11	0.11	0.16	0.115216	0.0805	NA	0.085	0.32	0.0143	0.08	NA	0.07	0.32	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.454312	NA	NA	NA	NA	NA	0.29	NA	3.9195
1260	9	116045272	116045272	G	A	intronic	PRPF4	NA	NA	NA	intronic	ENSG00000136875	NA	NA	NA	NA	NA	9q32	NA	NA	NA	NA	rs16932083	0.07	0.07	0.072	0.086861	0.0805	0.1161	0.0476	0.0076	0.1984	0.07	0.14	0.05	0.01	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.022773	NA	NA	NA	NA	ID=COSN168649;OCCURENCE=1(large_intestine)	0.072	NA	3.9195
1260	9	125075782	125075782	C	A	intronic	MRRF	NA	NA	NA	intronic	ENSG00000148187	NA	NA	NA	NA	NA	9q33.2	NA	NA	NA	NA	rs3818711	0.16	0.16	0.171	0.160343	0.0805	0.2232	0.1167	0.2231	0.1237	0.07	0.24	0.12	0.23	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.941239	NA	NA	NA	NA	NA	0.13	NA	3.9195
1260	11	10517039	10517039	C	T	intronic	AMPD3	NA	NA	NA	intronic	ENSG00000133805	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs35753139	0.04	0.04	0.03	0.0241613	0.0805	NA	0.0346	0.003	0.0123	0.08	NA	0.04	0.01	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.252709	1.252709	NA	NA	NA	NA	0.014	NA	3.9195
1260	13	113731215	113731215	G	T	intronic	MCF2L	NA	NA	NA	intronic	ENSG00000126217	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs2236373	0.11	0.11	0.103	0.096845	0.0805	0.2431	0.0749	0.0303	0.0685	0.07	0.22	0.11	0.04	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.121637	NA	NA	NA	NA	NA	0.043	NA	3.9195
1260	14	93685167	93685167	T	C	intronic	UBR7	NA	NA	NA	intronic	ENSG00000012963	NA	NA	NA	NA	NA	14q32.12	NA	NA	NA	NA	rs113599144	0.1	0.1	0.083	0.113219	0.0805	0.1002	0.1196	0.1437	0.1145	0.08	0.09	0.1	0.14	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.621918	NA	NA	NA	NA	NA	0.174	NA	3.9195
1260	16	21279144	21279144	G	A	intronic	CRYM	NA	NA	NA	intronic	ENSG00000103316	NA	NA	NA	NA	NA	16p12.2	NA	NA	NA	NA	rs78459225	0.05	0.05	0.047	0.0513179	0.0805	NA	0.0548	0.0635	0.0552	0.09	NA	0.06	0.07	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.05601	NA	NA	NA	NA	NA	0.094	NA	3.9195
1260	19	51294773	51294773	A	G	intronic	ACPT	NA	NA	NA	intronic	ENSG00000142513	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs10412900	0.13	0.13	0.121	0.127596	0.0805	0.126	0.0778	0.2542	0.0419	0.08	0.13	0.1	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.035782	NA	NA	NA	NA	NA	0.116	NA	3.9195
1260	16	29830829	29830829	T	C	intronic	PAGR1	NA	NA	NA	ncRNA_exonic	ENSG00000261690	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs11864180	0.13	0.13	0.119	0.129193	0.1352	0.0367	0.0893	0.2383	0.0992	0.14	0.04	0.1	0.25	0.13	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.586431	NA	NA	0.148953	0.241693	NA	0.232	NA	3.9191803
1260	8	15508200	15508200	T	C	intronic	TUSC3	NA	NA	NA	intronic	ENSG00000104723	NA	NA	NA	NA	NA	8p22	NA	NA	NA	NA	rs1035972	0.34	0.34	0.331	0.293131	0.3767	0.4276	0.3386	0.1581	0.2188	0.4	0.42	0.33	0.17	0.338	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.700295	1.700295	NA	0.366395	0.191557	NA	0.268	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000081454.3;CLNDSDB=.;CLNDSDBID=.	3.918905
1260	2	128050068	128050068	C	T	intronic	ERCC3	NA	NA	NA	intronic	ENSG00000163161	NA	NA	NA	NA	NA	2q14.3	NA	NA	NA	NA	rs4150403	0.04	0.04	0.047	0.0245607	0.0815	NA	0.0331	0.0053	0.0112	0.09	NA	0.03	0.0041	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.484054	NA	NA	NA	NA	NA	0.08	NA	3.9185
1260	6	142705070	142705070	G	A	intronic	GPR126	NA	NA	NA	intronic	ENSG00000112414	NA	NA	NA	NA	NA	6q24.1	NA	NA	NA	NA	rs41289839	0.11	0.11	0.091	0.104633	0.0815	0.2619	0.1196	0.0212	0.0685	0.08	0.22	0.15	0.01	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.010097	2.010097	NA	NA	NA	NA	0.036	NA	3.9185
1260	10	43285713	43285713	T	C	intronic	BMS1	NA	NA	NA	intronic	ENSG00000165733	NA	NA	NA	NA	NA	10q11.21	NA	NA	NA	NA	rs11239773	0.09	0.09	0.077	0.121605	0.0815	0.0258	0.1585	0.1899	0.1431	0.06	0.02	0.17	0.17	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.507002	NA	NA	NA	NA	NA	0.072	NA	3.9185
1260	17	48735641	48735641	C	A	intronic	ABCC3	NA	NA	NA	intronic	ENSG00000108846	NA	NA	NA	NA	NA	17q21.33	NA	NA	NA	NA	rs72837544	0.04	0.04	0.016	0.0227636	0.0815	NA	0.0288	0.0015	0.0102	0.09	NA	0.04	0.0041	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.24854	NA	NA	NA	NA	NA	0.022	NA	3.9185
1260	17	73627440	73627440	C	T	intronic	RECQL5	NA	NA	NA	intronic	ENSG00000108469	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs60199317	0.12	0.12	0.139	0.135583	0.0815	0.0456	0.1081	0.3109	0.0665	0.08	0.04	0.15	0.27	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.603159	NA	NA	NA	NA	NA	0.109	NA	3.9185
1260	7	100275110	100275110	C	G	intronic	GNB2	NA	NA	NA	intronic	ENSG00000172354	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs78530908	0.01	0.01	0.01	0.00878594	0.0278	0.001	0.0115	NA	0.0072	0.03	0.0017	0.01	0.002	0.0227	0.031	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.743768	NA	NA	0.031047	0.004539	NA	NA	NA	3.918453
1260	17	6531648	6531648	A	G	exonic	KIAA0753	NA	synonymous SNV	KIAA0753:NM_014804:exon3:c.T507C:p.S169S	exonic	ENSG00000198920	NA	synonymous SNV	ENSG00000198920:ENST00000570790:exon2:c.T507C:p.S169S,ENSG00000198920:ENST00000361413:exon3:c.T507C:p.S169S	NA	NA	17p13.1	NA	NA	NA	NA	rs2072149	0.67	0.67	0.683	0.697085	0.5457	0.7103	0.6801	0.8563	0.636	0.53	0.68	0.67	0.86	0.6255	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.05695	NA	NA	0.577014	0.809061	NA	0.819	NA	3.9184526
1260	12	863517	863517	G	A	intronic	WNK1	NA	NA	NA	intronic	ENSG00000060237	NA	NA	NA	NA	NA	12p13.33	NA	Name=Pol2	Name=61	NA	rs3858703	0.67	0.67	0.653	0.636182	0.7018	0.877	0.6037	0.3903	0.6759	0.71	0.9	0.6	0.38	0.6821	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.088052	NA	NA	0.697858	0.440628	NA	0.572	NA	3.918242
1260	19	35556357	35556357	C	T	ncRNA_intronic	HPN-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000227392	NA	NA	NA	NA	NA	19q13.12	NA	NA	NA	NA	rs2305747	0.63	0.63	0.638	0.576677	0.7485	0.6538	0.7968	0.3116	0.5225	0.76	0.67	0.75	0.32	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.058557	NA	NA	NA	NA	NA	0.558	NA	3.9181666
1260	11	133814264	133814264	G	A	intronic	IGSF9B	NA	NA	NA	intronic	ENSG00000080854	NA	NA	NA	NA	NA	11q25	NA	NA	NA	NA	rs71477460	0.01	0.01	0.015	0.00998403	0.0328	NA	0.0245	NA	NA	0.03	NA	0.02	NA	0.0173	0.032	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.093526	NA	NA	0.032005	0.00715	NA	0.014	NA	3.917895
1260	22	44489896	44489896	T	C	exonic	PARVB	NA	synonymous SNV	PARVB:NM_001243385:exon2:c.T90C:p.L30L,PARVB:NM_001243386:exon2:c.T45C:p.L15L,PARVB:NM_013327:exon2:c.T201C:p.L67L,PARVB:NM_001003828:exon3:c.T300C:p.L100L	exonic	ENSG00000188677	NA	synonymous SNV	ENSG00000188677:ENST00000338758:exon2:c.T201C:p.L67L,ENSG00000188677:ENST00000402876:exon2:c.T201C:p.L67L,ENSG00000188677:ENST00000404989:exon2:c.T90C:p.L30L,ENSG00000188677:ENST00000406477:exon3:c.T300C:p.L100L,ENSG00000188677:ENST00000444029:exon3:c.T195C:p.L65L	NA	NA	22q13.31	NA	NA	NA	NA	rs738479	0.64	0.64	0.632	0.645567	0.5487	0.8462	0.6484	0.6014	0.5961	0.54	0.86	0.6	0.57	0.6185	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.27657	NA	NA	0.581628	0.584203	NA	0.558	NA	3.9178386
1260	3	129811323	129811323	G	A	intronic	ALG1L2	NA	NA	NA	ncRNA_intronic	ENSG00000248243,ENSG00000251287	NA	NA	NA	NA	NA	3q22.1	NA	NA	NA	NA	rs11718709	0.3	0.3	0.232	0.297324	0.4155	0.252	0.3847	0.1725	0.3292	0.41	0.22	0.41	0.16	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.510171	NA	NA	NA	NA	NA	0.362	NA	3.9178333
1260	3	124438329	124438329	C	T	UTR3	KALRN	NM_001024660:c.*12C>T,NM_007064:c.*12C>T	NA	NA	UTR3	ENSG00000160145	ENST00000360013:c.*12C>T,ENST00000354186:c.*12C>T,ENST00000291478:c.*12C>T,ENST00000428018:c.*12C>T	NA	NA	NA	NA	3q21.2	NA	NA	NA	NA	rs4234221	0.17	0.17	0.169	0.199681	0.1064	0.1429	0.196	0.3094	0.2086	0.1	0.17	0.19	0.28	0.1711	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.718833	NA	NA	0.138094	0.264748	NA	0.21	NA	3.9177394
1260	2	160050682	160050682	T	C	intronic	TANC1	NA	NA	NA	intronic	ENSG00000115183	NA	NA	NA	NA	NA	2q24.2	NA	NA	NA	NA	rs75263328	0.04	0.04	0.039	0.029353	0.0825	NA	0.0605	0.0023	0.0194	0.08	NA	0.08	NA	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.813873	NA	NA	NA	NA	NA	0.036	NA	3.9175
1260	7	97617658	97617658	C	G	intronic	OCM2	NA	NA	NA	intronic	ENSG00000135175	NA	NA	NA	NA	NA	7q21.3	NA	NA	NA	NA	rs13242307	0.07	0.07	0.064	0.096246	0.0825	0.003	0.0836	0.1498	0.1431	0.08	NA	0.09	0.1	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.59981	NA	NA	NA	NA	NA	0.072	NA	3.9175
1260	7	128736596	128736596	G	A	intergenic	TPI1P2,LOC407835	dist=39303;dist=29729	NA	NA	ncRNA_exonic	ENSG00000241573	NA	NA	NA	NA	NA	7q32.1	NA	NA	NA	NA	rs56155376	0.03	0.03	0.029	0.0327476	0.0825	0.002	0.0389	0.0038	0.0481	0.06	0.0035	0.05	0.01	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.151295	NA	NA	NA	NA	NA	0.036	NA	3.9175
1260	12	54971382	54971382	T	C	intronic	PDE1B	NA	NA	NA	intronic	ENSG00000123360,ENSG00000135447	NA	NA	NA	NA	NA	12q13.2	NA	NA	NA	NA	rs112095658	0.03	0.03	0.033	0.0291534	0.0825	0.001	0.049	0.0023	0.0256	0.08	NA	0.04	0.002	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.200845	NA	NA	NA	NA	NA	0.029	NA	3.9175
1260	12	107914123	107914123	C	T	intronic	BTBD11	NA	NA	NA	intronic	ENSG00000151136	NA	NA	NA	NA	NA	12q23.3	NA	NA	NA	NA	rs7133143	0.09	0.09	0.092	0.0958466	0.0825	0.0516	0.1124	0.1422	0.0808	0.08	0.04	0.09	0.17	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.505096	NA	NA	NA	NA	NA	0.058	NA	3.9175
1260	14	24632481	24632481	G	T	intronic	IRF9	NA	NA	NA	intronic	ENSG00000213928,ENSG00000259529	NA	NA	NA	NA	NA	14q12	NA	NA	NA	NA	rs56212235	0.09	0.09	0.077	0.0904553	0.0825	0.0853	0.062	0.0893	0.1258	0.09	0.12	0.06	0.09	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.060016	NA	NA	NA	NA	NA	0.094	NA	3.9175
1260	18	43495416	43495416	G	T	intronic	EPG5	NA	NA	NA	intronic	ENSG00000152223	NA	NA	NA	NA	NA	18q12.3	NA	NA	NA	NA	rs7237763	0.07	0.07	0.075	0.0852636	0.0825	0.0268	0.0677	0.1467	0.0777	0.08	0.02	0.06	0.14	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.112018	NA	NA	NA	NA	NA	0.08	NA	3.9175
1260	9	14770580	14770580	G	A	intronic	FREM1	NA	NA	NA	intronic	ENSG00000164946	NA	NA	NA	NA	NA	9p22.3	NA	NA	Name=5	NA	rs1874109	0.3	0.3	0.295	0.298922	0.3767	0.3333	0.3141	0.1452	0.3804	0.37	0.33	0.34	0.14	0.3474	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.060275	NA	NA	0.358534	0.170111	NA	0.355	NA	3.917366
1260	X	2645366	2645366	G	C	intronic	CD99	NA	NA	NA	exonic	ENSG00000002586	NA	nonsynonymous SNV	ENSG00000002586:ENST00000381184:exon9:c.G508C:p.G170R	NA	NA	Xp22.33	NA	NA	NA	NA	rs311083	0.66	0.66	0.64388	NA	NA	NA	NA	NA	NA	0.62	0.49	0.64	0.92	0.6113	0.92	0.39	T	.	.	.	.	.	.	1.000	N	.	.	.	.	-0.970	T	0.000	T	0.079	-1.062	0.181	0.569	-0.420	0.033	.	-1.061796	NA	0	0.638122	0.861872	NA	0.696	NA	3.9172447
1260	19	44130897	44130897	C	T	intronic	CADM4	NA	NA	NA	intronic	ENSG00000105767	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs76003987	0.01	0.01	0.014	0.00958466	0.0338	NA	0.0159	0.0015	0.001	0.03	NA	0.02	0.01	0.0209	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.741015	NA	NA	0.028075	0.005452	NA	0.007	NA	3.917225
1260	11	49168300	49168300	G	A	UTR3	FOLH1	NM_001193472:c.*8C>T,NM_001193473:c.*8C>T,NM_001193471:c.*8C>T,NM_001014986:c.*8C>T,NM_004476:c.*8C>T	NA	NA	UTR3	ENSG00000086205	ENST00000256999:c.*8C>T,ENST00000343844:c.*8C>T,ENST00000340334:c.*8C>T,ENST00000525826:c.*1662C>T,ENST00000356696:c.*8C>T	NA	NA	NA	NA	11p11.12	NA	NA	NA	NA	rs595139	0.17	0.17	0.173	0.172724	0.1342	0.1577	0.1239	0.2943	0.0982	0.14	0.16	0.12	0.27	0.1508	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.02241	NA	NA	0.131224	0.26806	ID=COSN163931;OCCURENCE=1(NS)	0.174	NA	3.9171094
1260	16	3076663	3076663	C	T	intronic	THOC6	NA	NA	NA	intronic	ENSG00000131652	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs960274	0.1	0.1	0.076	0.0874601	0.0239	0.3383	0.0072	0.0015	0.0675	0.03	0.32	0.01	0.002	0.0447	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.385886	NA	NA	0.014302	0.004095	NA	0.014	NA	3.917098
1260	17	79987415	79987415	G	C	intronic	LRRC45	NA	NA	NA	intronic	ENSG00000169683	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs76311640	0.01	0.01	0.008	0.00758786	0.0288	NA	0.0014	0.003	0.0041	0.03	NA	NA	0.01	0.03	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.273238	NA	NA	0.024241	0.005121	NA	0.007	NA	3.916959
1260	4	57194460	57194460	A	G	UTR3	KIAA1211	NM_020722:c.*490A>G	NA	NA	UTR3	ENSG00000109265	ENST00000504228:c.*490A>G	NA	NA	NA	NA	4q12	NA	NA	NA	NA	rs6811153	0.27	0.27	0.26	0.273163	0.4165	0.0734	0.2983	0.2474	0.3487	0.42	0.06	0.31	0.25	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.76615	NA	NA	NA	NA	NA	0.297	NA	3.9168334
1260	17	74222490	74222490	A	G	intronic	RNF157	NA	NA	NA	ncRNA_exonic	ENSG00000228218	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs6501868	0.49	0.49	0.472	0.488019	0.4165	0.4593	0.5029	0.6467	0.3661	0.4	0.48	0.52	0.64	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.137051	NA	NA	NA	NA	NA	0.594	NA	3.9168333
1260	1	16775582	16775582	C	T	intronic	NECAP2	NA	NA	NA	intronic	ENSG00000157191	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs61769455	0.01	0.01	0.009	0.0103834	0.0338	NA	0.0173	0.003	0.002	0.03	NA	0.01	0.002	0.0246	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.234315	2.234315	NA	0.024767	0.003177	NA	0.007	NA	3.916833
1260	2	230231507	230231507	G	C	intronic	DNER	NA	NA	NA	intronic	ENSG00000187957	NA	NA	NA	NA	NA	2q36.3	NA	NA	NA	NA	rs74488906	0.05	0.05	0.035	0.0417332	0.0835	0.001	0.0663	0.0408	0.0245	0.08	NA	0.09	0.03	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.496168	NA	NA	NA	NA	NA	0.051	NA	3.9165
1260	3	184103722	184103722	A	G	intronic	CHRD	NA	NA	NA	intronic	ENSG00000090539,ENSG00000145191	NA	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs79419884	0.15	0.15	0.107	0.144169	0.0835	0.1984	0.2651	0.0787	0.1534	0.07	0.23	0.23	0.1	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.090454	NA	NA	NA	NA	NA	0.08	NA	3.9165
1260	5	112154571	112154571	G	C	intronic	APC	NA	NA	NA	intronic	ENSG00000134982	NA	NA	NA	NA	NA	5q22.2	NA	NA	NA	NA	rs80307314	0.07	0.07	0.065	0.0784744	0.0835	0.001	0.0548	0.1331	0.0961	0.1	NA	0.06	0.11	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.855396	NA	NA	NA	NA	NA	0.043	NA	3.9165
1260	6	62757651	62757651	C	A	intronic	KHDRBS2	NA	NA	NA	intronic	ENSG00000112232	NA	NA	NA	NA	NA	6q11.1	NA	NA	NA	NA	rs76870094	0.06	0.06	0.057	0.0599042	0.0835	0.0387	0.0663	0.0643	0.047	0.08	0.04	0.07	0.04	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.456668	NA	NA	NA	NA	NA	0.036	NA	3.9165
1260	6	89977332	89977332	G	A	intronic	GABRR2	NA	NA	NA	intronic	ENSG00000111886	NA	NA	NA	NA	NA	6q15	NA	NA	NA	NA	rs61372695	NA	NA	0.052	0.0605032	0.0835	0.0347	0.0447	0.0461	0.0941	NA	NA	NA	NA	NA	0.065	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.581296	2.581296	NA	NA	NA	NA	0.043	NA	3.9165
1260	9	18681741	18681741	G	T	intronic	ADAMTSL1	NA	NA	NA	intronic	ENSG00000178031	NA	NA	NA	NA	NA	9p22.1	NA	NA	NA	NA	rs72688674	0.09	0.09	0.082	0.114217	0.0835	0.0198	0.0692	0.1936	0.1677	0.09	0.02	0.09	0.19	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.804791	NA	NA	NA	NA	NA	0.072	NA	3.9165
1260	15	45357409	45357409	A	T	intronic	SORD	NA	NA	NA	intronic	ENSG00000140263	NA	NA	NA	NA	NA	15q21.1	NA	NA	NA	NA	rs28709644	0.03	0.03	NA	0.0285543	0.0835	NA	0.0403	0.0045	0.0256	0.07	NA	0.04	0.01	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.053008	NA	NA	NA	NA	NA	NA	NA	3.9165
1260	16	2238931	2238931	G	A	intronic	CASKIN1	NA	NA	NA	intronic	ENSG00000167971	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs11860560	0.1	0.1	0.089	0.0990415	0.0835	0.0486	0.0591	0.2095	0.046	0.08	0.04	0.08	0.2	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.041394	NA	NA	NA	NA	NA	0.08	NA	3.9165
1260	16	28600282	28600282	G	T	intronic	CCDC101	NA	NA	NA	intronic	ENSG00000176476	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs17639997	0.04	0.04	0.036	0.0461262	0.0835	0.003	0.0735	0.0166	0.0726	0.07	0.01	0.09	0.02	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.509491	NA	NA	NA	NA	NA	0.072	NA	3.9165
1260	18	44409581	44409581	C	A	intronic	PIAS2	NA	NA	NA	intronic	ENSG00000078043	NA	NA	NA	NA	NA	18q21.1	NA	NA	NA	NA	rs72907142	0.05	0.05	0.052	0.0427316	0.0835	0.006	0.0447	0.0673	0.0041	0.09	0.01	0.05	0.06	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.057659	NA	NA	NA	NA	NA	0.138	NA	3.9165
1260	19	39019752	39019752	C	T	intronic	RYR1	NA	NA	NA	intronic	ENSG00000196218	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs61441471	0.1	0.1	0.094	0.142372	0.0835	0.1925	0.1182	0.0787	0.2546	0.08	0.16	0.11	0.08	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.381682	NA	NA	NA	NA	NA	0.116	NA	3.9165
1260	4	57367809	57367809	G	A	intronic	SRP72	NA	NA	NA	intronic	ENSG00000174780	NA	NA	NA	NA	NA	4q12	NA	NA	NA	NA	rs76774105	0.08	0.08	0.075	0.0666933	0.0169	0.1865	0.0202	0.0333	0.0726	0.02	0.21	0.04	0.04	0.0459	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.922417	NA	NA	0.02093	0.031775	NA	0.065	NA	3.91627
1260	5	6742588	6742588	A	G	intronic	PAPD7	NA	NA	NA	intronic	ENSG00000112941	NA	NA	NA	NA	NA	5p15.31	NA	NA	NA	NA	rs28381377	0.01	0.01	0.016	0.0163738	0.0288	0.001	0.0159	NA	0.0419	0.03	NA	0.02	NA	0.0267	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.551447	NA	NA	0.028488	0.005674	NA	0.014	NA	3.916012
1260	10	21120116	21120116	A	G	intronic	NEBL	NA	NA	NA	intronic	ENSG00000078114	NA	NA	NA	NA	NA	10p12.31	NA	NA	NA	NA	rs10491056	0.45	0.45	0.471	0.46905	0.3489	0.5278	0.2911	0.6354	0.4335	0.33	0.53	0.35	0.63	0.3893	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.30005	3.30005	NA	0.345814	0.594871	NA	0.442	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|single;CLNACC=RCV000038689.1|RCV000127182.1;CLNDSDB=.|.;CLNDSDBID=.|.	3.915986
1260	15	40565055	40565055	G	A	intronic	PAK6	NA	NA	NA	intronic	ENSG00000137843,ENSG00000259288	NA	NA	NA	NA	NA	15q15.1	NA	Name=CTCF_(C-20),CTCF_(SC-5916),CTCF,Rad21,SMC3_(ab9263)	Name=19	NA	rs2253603	0.46	0.46	0.432	0.454473	0.7078	0.3065	0.7421	0.1203	0.5941	0.7	0.29	0.7	0.13	0.6336	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.763871	NA	NA	0.743023	0.241943	NA	0.384	NA	3.915577
1260	9	19296275	19296275	G	A	intronic	DENND4C	NA	NA	NA	intronic	ENSG00000137145	NA	NA	NA	NA	NA	9p22.1	NA	NA	NA	NA	rs11788720	0.02	0.02	0.012	0.0117812	0.0338	NA	0.0288	0.0015	0.0031	0.03	NA	0.04	NA	0.0203	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.382077	NA	NA	0.030344	0.007178	NA	0.022	NA	3.915556
1260	20	1617163	1617163	G	T	intronic	SIRPG	NA	NA	NA	ncRNA_intronic	ENSG00000237914	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs41275438	0.07	0.07	0.063	0.0535144	0.1501	0.0188	0.0663	0.0113	0.0378	0.15	0.02	0.08	0.01	0.1126	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.721128	NA	NA	0.155116	0.036087	NA	0.08	NA	3.9155173
1260	8	67408591	67408591	A	G	intronic	C8orf46	NA	NA	NA	intronic	ENSG00000169085	NA	NA	NA	NA	NA	8q13.1	NA	NA	NA	NA	rs74412410	0.07	0.07	0.079	0.077476	0.0845	NA	0.0836	0.1188	0.09	0.07	NA	0.09	0.14	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.189473	NA	NA	NA	NA	NA	0.101	NA	3.9155
1260	15	74572852	74572852	A	G	intronic	CCDC33	NA	NA	NA	intronic	ENSG00000140481	NA	NA	NA	NA	NA	15q24.1	NA	NA	NA	NA	rs3743217	0.07	0.07	0.056	0.0814696	0.0845	0.0774	0.1311	0.0061	0.1493	0.08	0.07	0.14	0.01	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.266293	NA	NA	NA	NA	NA	0.036	NA	3.9155
1260	2	143790793	143790793	T	C	intronic	KYNU	NA	NA	NA	intronic	ENSG00000115919	NA	NA	NA	NA	NA	2q22.2	NA	NA	NA	NA	rs17808482	0.01	0.01	0.009	0.00838658	0.0209	NA	0.0144	0.0023	0.0082	0.03	NA	0.01	0.002	0.0251	0.039	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.907847	1.907847	NA	0.038953	0.006809	NA	NA	NA	3.915047
1261	6	152717896	152717896	T	C	intronic	SYNE1	NA	NA	NA	intronic	ENSG00000131018	NA	NA	NA	NA	NA	6q25.2	NA	NA	NA	NA	rs78034368	0.01	0.01	0.013	0.014377	0.0239	NA	0.0159	0.0015	0.0358	0.02	NA	0.02	0.002	0.0277	0.034	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.72039	NA	NA	0.033605	0.007717	NA	0.007	NA	3.914795
1261	2	170029770	170029770	G	A	intronic	LRP2	NA	NA	NA	intronic	ENSG00000081479	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	rs62172586	0.01	0.01	0.009	0.0133786	0.0318	0.0139	0.0043	NA	0.0184	0.03	0.01	0.01	NA	0.0227	0.031	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.815364	2.815364	NA	0.030814	0.006355	NA	NA	NA	3.914686
1261	12	53043663	53043663	A	C	intronic	KRT2	NA	NA	NA	intronic	ENSG00000172867	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs150989489	0.02	0.02	0.009	0.0101837	0.0298	NA	0.0245	NA	0.0041	0.03	NA	0.05	NA	0.0211	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.506213	NA	NA	0.034419	0.006582	NA	0.007	NA	3.914681
1261	1	201330583	201330583	A	G	intronic	TNNT2	NA	NA	NA	intronic	ENSG00000118194	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs2275861	0.18	0.18	0.151	0.170927	0.0855	0.2976	0.0879	0.2557	0.0726	0.09	0.27	0.09	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.514588	NA	NA	NA	NA	NA	0.123	NA	3.9145
1261	2	165586693	165586693	T	C	intronic	COBLL1	NA	NA	NA	intronic	ENSG00000082438	NA	NA	NA	NA	NA	2q24.3	NA	NA	NA	NA	rs61553904	0.1	0.1	0.097	0.0978435	0.0855	0.0317	0.0764	0.2057	0.0481	0.09	0.04	0.08	0.2	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.795532	NA	NA	NA	NA	NA	0.08	NA	3.9145
1261	7	98587990	98587990	A	G	intronic	TRRAP	NA	NA	NA	intronic	ENSG00000196367	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs7808857	0.15	0.15	0.157	0.119409	0.0855	0.249	0.1527	0.0787	0.0521	0.09	0.27	0.16	0.1	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.123038	NA	NA	NA	NA	NA	0.109	NA	3.9145
1261	8	127504653	127504653	A	C	intergenic	LINC00861,FAM84B	dist=541212;dist=60030	NA	NA	ncRNA_exonic	ENSG00000253427	NA	NA	NA	NA	NA	8q24.21	NA	NA	NA	NA	rs6470446	0.18	0.18	0.177	0.175319	0.0855	0.2758	0.2147	0.1762	0.135	0.08	0.28	0.21	0.19	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.46385	NA	NA	NA	NA	NA	0.145	NA	3.9145
1261	22	43654477	43654477	C	T	intronic	SCUBE1	NA	NA	NA	intronic	ENSG00000159307	NA	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs9623792	0.12	0.12	0.129	0.123003	0.0855	0.0595	0.0821	0.2436	0.093	0.09	0.06	0.09	0.25	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.810948	NA	NA	NA	NA	NA	0.058	NA	3.9145
1261	7	149523137	149523137	G	A	intronic	SSPO	NA	NA	NA	ncRNA_intronic	ENSG00000197558	NA	NA	NA	NA	NA	7q36.1	NA	NA	NA	NA	rs62492769	0.16	0.16	0.141	0.142372	0.1352	0.245	0.1311	0.1127	0.092	0.13	0.23	0.12	0.13	0.1423	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.283111	1.283111	NA	0.141525	0.108146	NA	0.174	NA	3.9143083
1261	21	46021205	46021205	C	T	exonic	KRTAP10-7	NA	synonymous SNV	KRTAP10-7:NM_198689:exon2:c.C669T:p.P223P	exonic	ENSG00000205441	NA	synonymous SNV	ENSG00000205441:ENST00000380102:exon1:c.C684T:p.P228P	Score=378;Name=lod=46	NA	21q22.3	NA	NA	NA	NA	rs389167	0.74	0.74	0.77	0.776558	0.9354	0.8234	0.9135	0.5446	0.7812	0.85	0.73	0.83	0.51	0.8803	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.494728	NA	NA	0.936744	0.596686	NA	0.014	NA	3.9142226
1261	21	10862947	10862947	G	A	intergenic	TEKT4P2,TPTE	dist=894354;dist=43796	NA	NA	exonic	ENSG00000169861	NA	synonymous SNV	ENSG00000169861:ENST00000302092:exon2:c.G243A:p.Q81Q,ENSG00000169861:ENST00000559480:exon2:c.G243A:p.Q81Q	NA	NA	21p11.2	NA	NA	NA	NA	rs3883944	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5858	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.862136	NA	NA	NA	NA	NA	0.572	NA	3.9142
1261	14	106091504	106091504	A	G	intergenic	TMEM121,ELK2AP	dist=94965;dist=44410	NA	NA	exonic	ENSG00000211892	NA	synonymous SNV	ENSG00000211892:ENST00000390543:exon3:c.T390C:p.T130T	NA	NA	14q32.33	NA	NA	NA	NA	rs1042306	0.22	0.22	0.16	0.264177	0.2952	0.5179	0.2061	0.0847	0.2546	0.24	0.32	0.2	0.08	0.2907	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.331613	NA	NA	NA	NA	NA	0.159	NA	3.9141
1261	14	23857351	23857351	G	A	intronic	MYH6	NA	NA	NA	intronic	ENSG00000197616	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs8022522	0.4	0.4	0.433	0.419728	0.3638	0.1548	0.2939	0.7995	0.3262	0.36	0.16	0.33	0.79	0.3563	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.299984	NA	NA	0.366047	0.714707	ID=COSN164634;OCCURENCE=1(breast)	0.391	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000037503.1;CLNDSDB=.;CLNDSDBID=.	3.913853
1261	6	101307131	101307131	C	T	intronic	ASCC3	NA	NA	NA	intronic	ENSG00000112249	NA	NA	NA	NA	NA	6q16.3	NA	NA	NA	NA	rs3734351	0.17	0.17	0.183	0.173323	0.0487	0.3145	0.1282	0.2443	0.092	0.05	0.31	0.13	0.21	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.939268	1.939268	NA	0.037712	0.21315	NA	0.181	NA	3.913588
1261	1	1159485	1159485	C	T	intronic	SDF4	NA	NA	NA	intronic	ENSG00000078808	NA	NA	NA	NA	NA	1p36.33	NA	NA	NA	NA	rs75700266	0.12	0.12	0.109	0.122804	0.0865	0.1577	0.0865	0.1596	0.1002	0.1	0.19	0.07	0.13	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.050118	NA	NA	NA	NA	NA	0.13	NA	3.9135
1261	5	32053749	32053749	T	C	intronic	PDZD2	NA	NA	NA	intronic	ENSG00000133401	NA	NA	NA	NA	NA	5p13.3	NA	NA	NA	NA	rs13165981	0.05	0.05	0.045	0.0379393	0.0865	0.0198	0.0605	0.0166	0.0194	0.08	0.02	0.07	0.02	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.83742	NA	NA	NA	NA	NA	0.13	NA	3.9135
1261	7	98560213	98560213	T	C	intronic	TRRAP	NA	NA	NA	intronic	ENSG00000196367	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs41635	0.15	0.15	0.155	0.123003	0.0865	0.248	0.1513	0.093	0.0521	0.09	0.27	0.15	0.1	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.140466	NA	NA	NA	NA	NA	0.109	NA	3.9135
1261	10	102050347	102050347	T	C	intronic	PKD2L1	NA	NA	NA	intronic	ENSG00000107593	NA	NA	NA	NA	NA	10q24.31	NA	NA	NA	NA	rs2242053	0.23	0.23	0.224	0.263978	0.0865	0.1419	0.1383	0.6362	0.1585	0.1	0.15	0.14	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.35142	NA	NA	NA	NA	NA	0.181	NA	3.9135
1261	11	124235773	124235773	G	A	intergenic	OR8D2,OR8B2	dist=45680;dist=16525	NA	NA	ncRNA_exonic	ENSG00000227737	NA	NA	NA	NA	NA	11q24.2	NA	NA	NA	NA	rs35878354	0.04	0.04	0.036	0.0273562	0.0865	NA	0.0432	0.0091	0.0082	0.09	NA	0.04	0.02	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.080025	NA	NA	NA	NA	NA	0.051	NA	3.9135
1261	12	10264994	10264994	G	C	intergenic	CLEC1A,CLEC7A	dist=13389;dist=4382	NA	NA	ncRNA_exonic	ENSG00000255734	NA	NA	NA	NA	NA	12p13.2	NA	NA	NA	NA	rs1532087	0.22	0.22	0.218	0.240815	0.0865	0.129	0.085	0.5938	0.1483	0.09	0.12	0.12	0.59	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.003204	NA	NA	NA	NA	NA	0.384	NA	3.9135
1261	15	100649010	100649010	A	T	intronic	ADAMTS17	NA	NA	NA	intronic	ENSG00000140470	NA	NA	NA	NA	NA	15q26.3	NA	NA	NA	NA	rs72768102	0.06	0.06	0.063	0.0623003	0.0865	0.0476	0.0591	0.0182	0.1145	0.09	0.05	0.07	0.03	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.36831	NA	NA	NA	NA	NA	0.109	NA	3.9135
1261	16	988222	988222	G	T	intronic	LMF1	NA	NA	NA	intronic	ENSG00000103227	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs117214899	0.05	0.05	0.044	0.0413339	0.0865	NA	0.0461	0.0272	0.0532	0.09	NA	0.06	0.03	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.412998	NA	NA	NA	NA	NA	0.043	NA	3.9135
1261	8	22162271	22162271	T	G	intronic	PIWIL2	NA	NA	NA	intronic	ENSG00000197181	NA	NA	NA	NA	NA	8p21.3	NA	NA	NA	NA	rs75282394	0.02	0.02	0.018	0.0181709	0.0338	0.0169	0.0159	0.0015	0.0276	0.03	0.02	0.01	0.002	0.0274	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.553996	1.553996	NA	0.025349	0.004993	NA	0.022	NA	3.913451
1261	1	89273152	89273152	G	T	intronic	PKN2	NA	NA	NA	intronic	ENSG00000065243	NA	NA	NA	NA	NA	1p22.2	NA	NA	NA	NA	rs11809597	0.06	0.06	0.059	0.0650958	0.0348	NA	0.0245	0.1974	0.0133	0.04	NA	0.03	0.19	0.0336	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.065899	NA	NA	0.018155	0.173414	NA	0.138	NA	3.913445
1261	9	989943	989943	T	C	intronic	DMRT3	NA	NA	NA	UTR5	ENSG00000064218	ENST00000417254:c.-55T>C	NA	NA	NA	NA	9p24.3	NA	NA	NA	NA	rs6477419	0.26	0.26	0.241	0.243411	0.2535	0.2867	0.2017	0.2511	0.2076	0.29	0.31	0.22	0.21	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.089066	NA	NA	NA	NA	NA	0.268	NA	3.9131667
1261	19	43137202	43137202	T	C	ncRNA_intronic	LOC100996307	NA	NA	NA	ncRNA_intronic	ENSG00000213904	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs8107509	0.89	0.89	0.884	0.922324	0.7535	1	0.8617	0.9924	0.9642	0.76	1	0.84	0.99	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011243	NA	NA	NA	NA	NA	0.935	NA	3.9131666
1261	14	90442211	90442211	A	G	intronic	TDP1	NA	NA	NA	intronic	ENSG00000042088	NA	NA	NA	NA	NA	14q32.11	NA	NA	NA	NA	rs11851399	0.09	0.09	0.092	0.102835	0.0199	0.0079	0.0447	0.323	0.0297	0.02	0.01	0.05	0.3	0.0438	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.918733	NA	NA	0.02317	0.266014	NA	0.043	NA	3.91313
1261	1	89237078	89237078	A	G	intronic	PKN2	NA	NA	NA	intronic	ENSG00000065243	NA	NA	NA	NA	NA	1p22.2	NA	NA	NA	NA	rs9287139	0.06	0.06	0.064	0.0650958	0.0348	NA	0.0245	0.1974	0.0133	0.04	NA	0.03	0.19	0.0342	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.390643	1.390643	NA	0.018072	0.172195	NA	0.138	NA	3.912928
1261	15	71125093	71125093	G	A	exonic	LARP6	NA	synonymous SNV	LARP6:NM_018357:exon3:c.C774T:p.C258C	exonic	ENSG00000166173	NA	synonymous SNV	ENSG00000166173:ENST00000299213:exon3:c.C774T:p.C258C	NA	NA	15q23	NA	NA	NA	NA	rs3825970	0.52	0.52	0.481	0.501597	0.5885	0.503	0.7594	0.3048	0.4939	0.59	0.48	0.72	0.3	0.5672	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.740981	NA	NA	0.598208	0.358117	ID=COSM1374353;OCCURENCE=1(large_intestine)	0.464	NA	3.9127586
1261	1	6418857	6418857	G	A	intronic	ACOT7	NA	NA	NA	intronic	ENSG00000097021	NA	NA	NA	NA	NA	1p36.31	NA	NA	NA	NA	rs41278934	0.01	0.01	0.015	0.00838658	0.0288	NA	0.0058	0.0008	0.0082	0.03	NA	0.01	NA	0.0245	0.034	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.366374	NA	NA	0.033953	0.007263	NA	0.072	NA	3.912747
1261	2	111850427	111850427	T	G	intronic	ACOXL	NA	NA	NA	intronic	ENSG00000153093	NA	NA	NA	NA	NA	2q13	NA	NA	NA	NA	rs77311714	0.03	0.03	0.023	0.0644968	0.0219	0.0407	0.036	0.0303	0.1994	0.03	0.04	0.04	0.04	0.0446	0.054	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.001602	NA	NA	0.020814	0.020881	NA	0.036	NA	3.912686
1261	7	139757911	139757911	C	G	intronic	PARP12	NA	NA	NA	intronic	ENSG00000059378	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs10252898	0.12	0.12	0.126	0.158147	0.0875	0.001	0.0764	0.3782	0.1534	0.09	NA	0.09	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.025031	NA	NA	NA	NA	NA	0.138	NA	3.9125
1261	13	34404249	34404249	T	C	intronic	RFC3	NA	NA	NA	intronic	ENSG00000133119	NA	NA	NA	NA	NA	13q13.2	NA	NA	NA	NA	rs2274728	0.29	0.29	0.28	0.312899	0.0875	0.3363	0.3429	0.4947	0.2536	0.09	0.36	0.31	0.49	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.333157	NA	NA	NA	NA	NA	0.203	NA	3.9125
1261	17	41059718	41059718	A	G	intronic	G6PC	NA	NA	NA	intronic	ENSG00000131482	NA	NA	NA	NA	NA	17q21.31	NA	NA	NA	NA	rs161627	0.12	0.12	0.118	0.144968	0.0875	0.004	0.1455	0.2799	0.1667	0.09	NA	0.15	0.27	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.459563	NA	NA	NA	NA	NA	0.196	NA	3.9125
1261	20	13846191	13846191	A	G	intronic	SEL1L2	NA	NA	NA	intronic	ENSG00000101251	NA	NA	NA	Score=251;Name=lod=14	NA	20p12.1	NA	NA	NA	NA	rs761812	0.35	0.35	0.341	0.342252	0.3757	0.4702	0.2954	0.2148	0.3814	0.36	0.45	0.32	0.22	0.3505	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.73606	1.73606	NA	0.361321	0.227466	NA	0.413	NA	3.912479
1261	9	137017170	137017170	G	A	intronic	WDR5	NA	NA	NA	intronic	ENSG00000196363	NA	NA	NA	NA	NA	9q34.2	NA	NA	NA	NA	rs138223746	0.02	0.02	0.011	0.0107827	0.0308	NA	0.0274	0.0023	0.001	0.03	NA	0.04	0.0041	0.0207	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.054228	NA	NA	0.036047	0.005447	NA	0.022	NA	3.912453
1261	9	100234545	100234545	G	A	intronic	TDRD7	NA	NA	NA	intronic	ENSG00000196116	NA	NA	NA	NA	NA	9q22.33	NA	NA	NA	NA	rs12002057	0.04	0.04	0.029	0.0507188	0.0258	0.001	0.0216	0.1377	0.0307	0.03	0.0017	0.02	0.11	0.0328	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.71243	3.71243	NA	0.02896	0.104857	NA	0.051	NA	3.91244
1261	12	8377445	8377445	T	C	UTR5	FAM90A1	NM_018088:c.-17A>G	NA	NA	UTR5	ENSG00000171847	ENST00000307435:c.-17A>G,ENST00000538603:c.-17A>G,ENST00000442295:c.-17A>G	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs186016880	0.19	0.19	NA	0.21885	0.2097	0.379	0.1873	0.0696	0.2873	0.16	0.36	0.19	0.05	0.2113	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.482606	NA	NA	NA	NA	NA	NA	NA	3.9123334
1261	3	193711940	193711940	A	G	ncRNA_exonic	DPPA2P3	NA	NA	NA	ncRNA_intronic	ENSG00000214146,ENSG00000238043	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs6444762	0.77	0.77	0.752	0.772364	0.7545	0.8442	0.8069	0.6558	0.8497	0.76	0.86	0.8	0.66	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.902862	NA	NA	NA	NA	NA	0.819	NA	3.9121666
1261	10	45430699	45430699	A	G	ncRNA_intronic	TMEM72-AS1	NA	NA	NA	ncRNA_UTR3	ENSG00000187783	NA	NA	NA	NA	NA	10q11.21	NA	NA	NA	NA	rs7067692	0.7	0.7	0.734	0.701278	0.7545	0.4663	0.768	0.9145	0.5532	0.74	0.44	0.78	0.89	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.079668	NA	NA	NA	NA	NA	0.754	NA	3.9121666
1261	18	43319060	43319060	T	C	intronic	SLC14A1	NA	NA	NA	ncRNA_intronic	ENSG00000267193	NA	NA	NA	NA	NA	18q12.3	NA	NA	NA	NA	rs473429	0.45	0.45	0.442	0.489617	0.4215	0.4732	0.4107	0.5045	0.6125	0.42	0.48	0.41	0.47	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.340247	NA	NA	NA	NA	NA	0.413	NA	3.9118333
1261	7	80394449	80394449	T	G	intronic	SEMA3C	NA	NA	NA	intronic	ENSG00000075223	NA	NA	NA	NA	NA	7q21.11	NA	NA	NA	NA	rs10085732	0.05	0.05	0.06	0.0652955	0.0239	NA	0.0375	0.171	0.0521	0.02	NA	0.04	0.18	0.0375	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.089416	2.089416	NA	0.026977	0.147072	NA	0.051	NA	3.911623
1261	5	64865848	64865848	A	G	intronic	PPWD1	NA	NA	NA	intronic	ENSG00000113593	NA	NA	NA	NA	NA	5q12.3	NA	NA	NA	NA	rs3752674	0.06	0.06	0.055	0.0790735	0.0209	0.0893	0.0418	0.1112	0.1115	0.02	0.08	0.04	0.12	0.0465	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.00095	2.00095	NA	0.021081	0.101738	NA	0.043	NA	3.911519
1261	1	158985831	158985831	C	T	intronic	IFI16	NA	NA	NA	intronic	ENSG00000163565	NA	NA	NA	NA	NA	1q23.1	NA	NA	NA	NA	rs66519738	0.05	0.05	0.037	0.047524	0.0885	NA	0.0706	0.028	0.0644	0.09	NA	0.07	0.04	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.356064	NA	NA	NA	NA	NA	0.152	NA	3.9115
1261	1	167849658	167849658	C	G	intronic	ADCY10	NA	NA	NA	intronic	ENSG00000143199	NA	NA	NA	NA	NA	1q24.2	NA	NA	NA	NA	rs76779157	0.06	0.06	0.05	0.0517173	0.0885	NA	0.0692	0.0794	0.0174	0.08	NA	0.08	0.09	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.491138	1.491138	NA	NA	NA	NA	0.058	NA	3.9115
1261	5	52369193	52369193	A	G	intronic	ITGA2	NA	NA	NA	intronic	ENSG00000164171	NA	NA	NA	NA	NA	5q11.2	NA	NA	NA	NA	rs3815755	0.1	0.1	0.122	0.104233	0.0885	0.0317	0.0663	0.2035	0.0879	0.09	0.03	0.06	0.26	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.932521	NA	NA	NA	NA	NA	0.109	NA	3.9115
1261	5	128448422	128448422	G	T	intronic	ISOC1	NA	NA	NA	intronic	ENSG00000066583	NA	NA	NA	NA	NA	5q23.3	NA	NA	NA	NA	rs3798121	0.16	0.16	0.143	0.18131	0.0885	0.1726	0.1196	0.2912	0.181	0.07	0.18	0.13	0.27	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.864732	NA	NA	NA	NA	NA	0.181	NA	3.9115
1261	5	147491218	147491218	A	G	intronic	SPINK5	NA	NA	NA	intronic	ENSG00000133710	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs2287770	0.19	0.19	0.195	0.22504	0.0885	0.3105	0.0778	0.292	0.2914	0.09	0.31	0.08	0.28	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3756	NA	NA	NA	NA	NA	0.174	NA	3.9115
1261	5	147491552	147491552	A	G	intronic	SPINK5	NA	NA	NA	intronic	ENSG00000133710	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs2287767	0.19	0.19	0.202	0.22504	0.0885	0.3105	0.0778	0.292	0.2914	0.09	0.31	0.08	0.28	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.583179	NA	NA	NA	NA	NA	0.174	NA	3.9115
1261	6	117730899	117730899	T	G	intronic	ROS1	NA	NA	NA	intronic	ENSG00000047936	NA	NA	NA	NA	NA	6q22.1	NA	NA	NA	NA	rs2243375	0.06	0.06	0.048	0.0497204	0.0885	0.0437	0.0807	0.003	0.0573	0.1	0.04	0.07	0.01	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.20338	NA	NA	NA	NA	NA	0.101	NA	3.9115
1261	10	129917670	129917670	A	G	intronic	MKI67	NA	NA	NA	intronic	ENSG00000148773	NA	NA	NA	NA	NA	10q26.2	NA	NA	NA	NA	rs41282878	0.04	0.04	0.025	0.0399361	0.0885	NA	0.0533	0.0015	0.0736	0.08	0.0017	0.05	0.0041	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.369747	NA	NA	NA	NA	NA	0.051	NA	3.9115
1261	12	133428181	133428181	C	T	intronic	CHFR	NA	NA	NA	intronic	ENSG00000072609	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs76946232	0.03	0.03	0.012	0.0211661	0.0348	NA	0.062	0.003	0.0245	0.04	0.0017	0.07	0.002	0.0306	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.168204	NA	NA	0.023538	0.005007	NA	0.007	NA	3.911062
1261	2	113999736	113999736	G	T	ncRNA_intronic	LOC654433	NA	NA	NA	ncRNA_intronic	ENSG00000189223	NA	NA	NA	NA	NA	2q13	NA	NA	NA	NA	rs13015478	0.24	0.24	0.216	0.251797	0.2485	0.1468	0.3112	0.2746	0.2904	0.24	0.15	0.33	0.3	0.2608	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.964432	1.964432	NA	0.246433	0.261416	NA	0.232	NA	3.9109336
1261	3	48626745	48626745	C	T	intronic	COL7A1	NA	NA	NA	intronic	ENSG00000114270	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs144483183	0.01	0.01	0.012	0.0101837	0.0318	NA	0.0173	0.0008	0.0061	0.03	NA	0.02	NA	0.0207	0.037	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.899116	NA	NA	0.036628	0.00749	NA	0.007	NA	3.910872
1261	8	144124512	144124512	T	C	intronic	C8orf31	NA	NA	NA	intronic	ENSG00000177335	NA	NA	NA	NA	NA	8q24.3	NA	NA	Name=34	NA	rs11136299	0.38	0.38	0.371	0.388578	0.3628	0.4177	0.33	0.4826	0.2996	0.36	0.38	0.35	0.44	0.3641	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.560762	NA	NA	0.362558	0.477077	NA	0.399	NA	3.910542
1261	1	167865740	167865740	G	A	intronic	ADCY10	NA	NA	NA	intronic	ENSG00000143199	NA	NA	NA	NA	NA	1q24.2	NA	NA	NA	NA	rs57419373	0.06	0.06	0.05	0.0455272	0.0895	NA	0.0677	0.056	0.0174	0.08	NA	0.08	0.06	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.38903	NA	NA	NA	NA	NA	0.051	NA	3.9105
1261	2	96241051	96241051	G	A	intergenic	TRIM43B,TRIM43	dist=90572;dist=16715	NA	NA	ncRNA_exonic	ENSG00000232717	NA	NA	NA	NA	NA	2q11.1	NA	NA	NA	NA	rs1974909	0.13	0.13	0.096	0.139776	0.0895	0.1369	0.1311	0.23	0.0787	0.09	0.11	0.11	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.341539	NA	NA	NA	NA	NA	0.181	NA	3.9105
1261	4	79308446	79308446	T	C	intronic	FRAS1	NA	NA	NA	intronic	ENSG00000138759	NA	NA	NA	NA	NA	4q21.21	NA	NA	NA	NA	rs10016220	0.13	0.13	0.158	0.13738	0.0895	0.0556	0.0605	0.2852	0.1258	0.1	0.06	0.07	0.31	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.246029	NA	NA	NA	NA	NA	0.188	NA	3.9105
1261	5	52368594	52368594	C	T	intronic	ITGA2	NA	NA	NA	intronic	ENSG00000164171	NA	NA	NA	NA	NA	5q11.2	NA	NA	NA	NA	rs3212586	0.1	0.1	0.113	0.0964457	0.0895	0.0258	0.0663	0.2027	0.0542	0.09	0.03	0.06	0.25	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.099597	NA	NA	NA	NA	NA	0.087	NA	3.9105
1261	6	36945746	36945746	A	G	intronic	MTCH1	NA	NA	NA	intronic	ENSG00000137409	NA	NA	NA	NA	NA	6p21.2	NA	NA	NA	NA	rs79238769	0.11	0.11	0.096	0.134185	0.0895	0.0327	0.1124	0.2269	0.1748	0.08	0.04	0.11	0.26	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.684463	NA	NA	NA	NA	NA	0.138	NA	3.9105
1261	6	36945754	36945754	A	G	intronic	MTCH1	NA	NA	NA	intronic	ENSG00000137409	NA	NA	NA	NA	NA	6p21.2	NA	NA	NA	NA	rs77649624	0.11	0.11	0.092	0.134185	0.0895	0.0327	0.1124	0.2269	0.1748	0.08	0.04	0.11	0.26	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.666634	NA	NA	NA	NA	NA	0.138	NA	3.9105
1261	6	36945781	36945781	C	T	intronic	MTCH1	NA	NA	NA	intronic	ENSG00000137409	NA	NA	NA	NA	NA	6p21.2	NA	NA	NA	NA	rs16889347	0.11	0.11	0.095	0.134185	0.0895	0.0327	0.1124	0.2269	0.1748	0.08	0.04	0.11	0.26	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.778805	NA	NA	NA	NA	NA	0.13	NA	3.9105
1261	11	73073846	73073846	G	A	intronic	ARHGEF17	NA	NA	NA	intronic	ENSG00000110237	NA	NA	NA	NA	NA	11q13.4	NA	NA	NA	NA	rs75912489	0.04	0.04	0.038	0.047524	0.0895	0.0099	0.0403	0.0265	0.0767	0.09	0.01	0.02	0.02	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.152506	NA	NA	NA	NA	NA	0.08	NA	3.9105
1261	12	132529649	132529649	T	C	intronic	EP400	NA	NA	NA	intronic	ENSG00000183495	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs6598192	0.05	0.05	0.051	0.0399361	0.0895	0.001	0.049	0.0318	0.0337	0.08	NA	0.05	0.04	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.117272	NA	NA	NA	NA	NA	0.08	NA	3.9105
1261	12	133351030	133351030	G	A	intronic	GOLGA3	NA	NA	NA	intronic	ENSG00000090615	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs7313064	0.24	0.24	0.209	0.198882	0.0895	0.4425	0.2305	0.1732	0.0726	0.1	0.46	0.24	0.2	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.813684	NA	NA	NA	NA	NA	0.152	NA	3.9105
1261	13	39420923	39420923	T	G	intronic	FREM2	NA	NA	NA	intronic	ENSG00000150893	NA	NA	NA	NA	NA	13q13.3	NA	NA	NA	NA	rs9548503	0.09	0.09	0.077	0.109625	0.0895	0.001	0.2522	0.1445	0.0941	0.07	0.0017	0.2	0.12	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.501524	NA	NA	NA	NA	NA	0.087	NA	3.9105
1261	13	39420971	39420971	A	G	intronic	FREM2	NA	NA	NA	intronic	ENSG00000150893	NA	NA	NA	NA	NA	13q13.3	NA	NA	NA	NA	rs9548504	0.09	0.09	0.075	0.109824	0.0895	0.001	0.2522	0.1452	0.0941	0.07	0.0017	0.2	0.12	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.251934	NA	NA	NA	NA	NA	0.087	NA	3.9105
1261	21	46276343	46276343	C	T	intronic	PTTG1IP	NA	NA	NA	intronic	ENSG00000183255	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs35432315	0.07	0.07	0.075	0.066893	0.0895	0.0685	0.0447	0.0522	0.0777	0.09	0.07	0.05	0.05	NA	0.098	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.181119	NA	NA	NA	NA	NA	0.152	NA	3.9105
1261	14	20873795	20873795	A	G	intronic	TEP1	NA	NA	NA	intronic	ENSG00000129566	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs111482622	0.02	0.02	0.016	0.0201677	0.0298	NA	0.0231	0.0265	0.0204	0.03	NA	0.02	0.01	0.0268	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.724206	NA	NA	0.033023	0.028143	NA	NA	NA	3.910377
1261	18	46383898	46383898	T	C	intronic	CTIF	NA	NA	NA	intronic	ENSG00000134030	NA	NA	NA	NA	NA	18q21.1	NA	NA	NA	NA	rs937022	0.1	0.1	0.097	0.165136	0.0457	0.0099	0.0533	0.3714	0.2485	0.04	NA	0.06	0.32	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.068611	NA	NA	0.043997	0.302023	NA	0.145	NA	3.910303
1261	2	214160897	214160897	C	G	intronic	SPAG16	NA	NA	NA	intronic	ENSG00000144451	NA	NA	NA	NA	NA	2q34	NA	NA	NA	NA	rs74502509	0.02	0.02	0.014	0.013778	0.0457	NA	0.0173	0.0008	0.0102	0.06	NA	0.02	0.002	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.304752	NA	NA	0.044099	0.008671	NA	0.014	NA	3.910201
1261	5	13883262	13883262	C	G	intronic	DNAH5	NA	NA	NA	ncRNA_intronic	ENSG00000251423	NA	NA	NA	NA	NA	5p15.2	NA	NA	NA	NA	rs10462710	0.5	0.5	0.488	0.44389	0.4235	0.7232	0.438	0.3313	0.3333	0.44	0.74	0.45	0.34	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.450444	NA	NA	NA	NA	NA	0.391	NA	3.9098333
1261	11	67201008	67201008	C	T	intronic	RPS6KB2	NA	NA	NA	ncRNA_intronic	ENSG00000255949	NA	NA	NA	NA	NA	11q13.2	NA	NA	NA	NA	rs1790753	0.5	0.5	0.497	0.486821	0.4235	0.3264	0.5692	0.8071	0.226	0.44	0.32	0.54	0.77	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.117824	NA	NA	NA	NA	NA	0.58	NA	3.9098333
1261	14	106090846	106090846	T	C	intergenic	TMEM121,ELK2AP	dist=94307;dist=45068	NA	NA	exonic	ENSG00000211892	NA	synonymous SNV	ENSG00000211892:ENST00000390543:exon4:c.A951G:p.T317T	NA	NA	14q32.33	NA	NA	NA	NA	rs8011686	0.25	0.25	0.193	0.262181	0.3002	0.5308	0.2046	0.0567	0.2648	0.3	0.35	0.23	0.08	0.29	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.587005	NA	NA	NA	NA	NA	NA	NA	3.9098
1261	2	10045014	10045014	C	T	exonic	TAF1B	NA	synonymous SNV	TAF1B:NM_005680:exon9:c.C834T:p.Y278Y	exonic	ENSG00000115750	NA	synonymous SNV	ENSG00000115750:ENST00000263663:exon9:c.C834T:p.Y278Y,ENSG00000115750:ENST00000396242:exon9:c.C69T:p.Y23Y	NA	NA	2p25.1	Score=915;Name=V$TATA_C	NA	NA	NA	rs400917	0.86	0.86	0.859	0.819688	0.9324	0.8294	0.9424	0.6566	0.8272	0.94	0.82	0.93	0.73	0.8918	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.639417	NA	NA	0.932791	0.6936	NA	0.797	NA	3.9096756
1261	2	44101229	44101229	A	G	intronic	ABCG8	NA	NA	NA	intronic	ENSG00000143921	NA	NA	NA	NA	NA	2p21	NA	NA	NA	NA	rs34198326	0.09	0.09	0.075	0.0892572	0.0905	0.0238	0.111	0.1286	0.0869	0.08	0.03	0.13	0.12	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.518962	NA	NA	NA	NA	NA	0.188	NA	3.9095
1261	2	103121654	103121654	G	A	intronic	SLC9A4	NA	NA	NA	intronic	ENSG00000180251	NA	NA	NA	NA	NA	2q12.1	NA	NA	NA	NA	rs72825956	0.11	0.11	0.094	0.107228	0.0905	0.1905	0.0865	0.053	0.1268	0.09	0.18	0.1	0.07	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.19268	NA	NA	NA	NA	NA	0.087	NA	3.9095
1261	3	33768909	33768909	A	G	intergenic	CLASP2,PDCD6IP	dist=9204;dist=71154	NA	NA	ncRNA_exonic	ENSG00000228112	NA	NA	NA	NA	NA	3p22.3	NA	NA	NA	NA	rs73055665	0.04	0.04	0.043	0.0295527	0.0905	0.002	0.0432	0.0045	0.0194	0.08	0.0035	0.06	0.01	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.732631	NA	NA	NA	NA	NA	0.08	NA	3.9095
1261	4	17819135	17819135	T	A	intronic	NCAPG	NA	NA	NA	intronic	ENSG00000109805	NA	NA	NA	NA	NA	4p15.31	NA	NA	NA	NA	rs2302211	0.1	0.1	0.072	0.142572	0.0905	0.1617	0.1167	0.0877	0.2689	0.09	0.12	0.12	0.09	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.358582	NA	NA	NA	NA	NA	0.138	NA	3.9095
1261	7	131864379	131864379	A	G	intronic	PLXNA4	NA	NA	NA	intronic	ENSG00000221866	NA	NA	NA	NA	NA	7q32.3	NA	NA	NA	NA	rs57665981	0.18	0.18	0.179	0.184305	0.0905	0.0536	0.1037	0.5061	0.0378	0.08	0.06	0.1	0.56	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.579105	NA	0	NA	NA	NA	0.138	NA	3.9095
1261	14	95918513	95918513	G	A	intronic	SYNE3	NA	NA	NA	intronic	ENSG00000176438	NA	NA	NA	NA	NA	14q32.13	NA	NA	NA	NA	rs6575514	0.05	0.05	0.05	0.0551118	0.0905	0.002	0.0677	0.0197	0.1125	0.09	0.0017	0.09	0.02	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.463564	NA	NA	NA	NA	NA	0.123	NA	3.9095
1261	11	118896115	118896115	A	G	intronic	SLC37A4	NA	NA	NA	UTR3	ENSG00000196655	ENST00000533058:c.*356A>G	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs2276072	0.15	0.15	0.126	0.185903	0.2575	0.0843	0.2104	0.087	0.3333	0.22	0.05	0.21	0.1	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.61609	NA	NA	NA	NA	NA	NA	NA	3.9091667
1261	11	118896116	118896116	A	C	intronic	SLC37A4	NA	NA	NA	UTR3	ENSG00000196655	ENST00000533058:c.*357A>C	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs2276071	0.15	0.15	0.123	0.185903	0.2575	0.0843	0.2104	0.087	0.3333	0.22	0.05	0.21	0.1	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.485848	NA	NA	NA	NA	NA	NA	NA	3.9091667
1261	4	47560386	47560386	C	T	intronic	ATP10D	NA	NA	NA	ncRNA_intronic	ENSG00000248254	NA	NA	NA	NA	NA	4p12	NA	NA	NA	NA	rs4298115	0.36	0.36	0.319	0.33147	0.4245	0.2073	0.3991	0.3011	0.3569	0.44	0.22	0.44	0.33	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.183837	NA	NA	NA	NA	NA	0.464	NA	3.9088333
1261	12	117476896	117476896	C	A	UTR3	TESC	NM_017899:c.*42G>T,NM_001168325:c.*42G>T	NA	NA	UTR3	ENSG00000088992	ENST00000470612:c.*200G>T,ENST00000335209:c.*42G>T,ENST00000541210:c.*42G>T,ENST00000392545:c.*42G>T,ENST00000549210:c.*42G>T	NA	NA	NA	NA	12q24.22	NA	NA	NA	NA	rs9308	0.13	0.13	0.131	0.132987	0.1581	0.0357	0.0764	0.2247	0.1237	0.16	0.03	0.09	0.24	0.139	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.962166	NA	NA	0.127667	0.190341	NA	0.087	NA	3.9085664
1261	1	13172503	13172503	C	T	intergenic	PRAMEF5,LOC440563	dist=54752;dist=10457	NA	NA	ncRNA_intronic	ENSG00000236179	NA	NA	NA	NA	NA	1p36.21	NA	NA	NA	NA	rs61780789	0.11	0.11	0.107	0.167732	0.0915	0.0546	0.0735	0.267	0.2955	0.09	0.04	0.07	0.26	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.59481	NA	NA	NA	NA	NA	0.138	NA	3.9085
1261	1	150634472	150634472	A	G	intronic	GOLPH3L	NA	NA	NA	intronic	ENSG00000143457	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs3754207	0.08	0.08	0.087	0.0790735	0.0915	0.1736	0.0476	0.003	0.0941	0.08	0.19	0.04	NA	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.513154	2.513154	NA	NA	NA	NA	0.065	NA	3.9085
1261	1	150727394	150727394	G	A	intronic	CTSS	NA	NA	NA	intronic	ENSG00000163131	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs11576175	0.09	0.09	0.08	0.0792732	0.0915	0.1726	0.049	0.003	0.0951	0.08	0.19	0.04	NA	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.974745	1.974745	NA	NA	NA	NA	0.065	NA	3.9085
1261	4	69682509	69682509	A	G	intronic	UGT2B10	NA	NA	NA	intronic	ENSG00000109181	NA	NA	NA	NA	NA	4q13.2	NA	NA	NA	NA	rs113475342	0.05	0.05	0.047	0.04373	0.0915	0.001	0.072	0.0348	0.0307	0.1	NA	0.07	0.03	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.079428	NA	NA	NA	NA	NA	0.123	NA	3.9085
1261	5	32071381	32071381	G	C	intronic	PDZD2	NA	NA	NA	intronic	ENSG00000133401	NA	NA	NA	NA	NA	5p13.3	NA	NA	NA	NA	rs72761544	0.12	0.12	0.095	0.126797	0.0915	0.2262	0.1182	0.0318	0.1953	0.1	0.24	0.09	0.03	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.827556	NA	NA	NA	NA	NA	0.116	NA	3.9085
1261	5	125906344	125906344	T	C	intronic	ALDH7A1	NA	NA	NA	intronic	ENSG00000164904	NA	NA	NA	NA	NA	5q23.2	NA	NA	NA	NA	rs6897789	0.2	0.2	0.219	0.197085	0.0915	0.1518	0.0807	0.4758	0.0583	0.08	0.15	0.09	0.5	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.415144	NA	NA	NA	NA	NA	0.312	NA	3.9085
1261	7	75190477	75190477	C	T	intronic	HIP1	NA	NA	NA	intronic	ENSG00000127946	NA	NA	NA	NA	NA	7q11.23	NA	NA	NA	NA	rs3757604	0.09	0.09	0.074	0.0900559	0.0915	0.0913	0.0793	0.0809	0.1074	0.08	0.1	0.1	0.08	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.71652	NA	NA	NA	NA	NA	0.058	NA	3.9085
1261	8	12600606	12600606	T	A	intronic	LONRF1	NA	NA	NA	intronic	ENSG00000154359	NA	NA	NA	NA	NA	8p23.1	NA	NA	NA	NA	rs73202645	0.04	0.04	0.036	0.0351438	0.0915	0.004	0.0605	0.0045	0.0327	0.08	0.0017	0.06	0.01	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.920861	NA	NA	NA	NA	NA	0.123	NA	3.9085
1261	9	33060410	33060410	T	A	intronic	SMU1	NA	NA	NA	intronic	ENSG00000122692	NA	NA	NA	NA	NA	9p21.1	NA	NA	NA	NA	rs41305659	0.04	0.04	0.038	0.0283546	0.0915	0.001	0.0432	0.0038	0.0143	0.09	0.0017	0.05	0.01	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.070238	NA	NA	NA	NA	NA	0.036	NA	3.9085
1261	9	91977443	91977443	C	G	intronic	SEMA4D	NA	NA	NA	intronic	ENSG00000187764	NA	NA	NA	NA	NA	9q22.2	NA	NA	NA	NA	rs45440499	0.04	0.04	0.041	0.0443291	0.0915	NA	0.0418	0.003	0.0992	0.09	NA	0.04	0.01	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.80632	NA	NA	NA	NA	NA	0.058	NA	3.9085
1261	11	72004714	72004714	T	C	intronic	CLPB	NA	NA	NA	intronic	ENSG00000162129	NA	NA	NA	NA	NA	11q13.4	NA	NA	NA	NA	rs680660	0.19	0.19	0.185	0.213259	0.0915	0.2192	0.1311	0.4501	0.0706	0.08	0.2	0.14	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.794497	NA	NA	NA	NA	NA	0.196	NA	3.9085
1261	11	73066771	73066771	G	A	intronic	ARHGEF17	NA	NA	NA	intronic	ENSG00000110237	NA	NA	NA	NA	NA	11q13.4	NA	NA	NA	NA	rs112840535	0.05	0.05	0.041	0.0483227	0.0915	0.0099	0.0418	0.0272	0.0767	0.09	0.01	0.03	0.03	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.573678	NA	NA	NA	NA	NA	0.08	NA	3.9085
1261	13	110831866	110831866	T	C	intronic	COL4A1	NA	NA	NA	intronic	ENSG00000187498	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs10492497	0.1	0.1	0.086	0.0876597	0.0915	0.1131	0.0735	0.0855	0.0706	0.09	0.13	0.08	0.07	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.536636	NA	NA	NA	NA	NA	0.094	NA	3.9085
1261	15	90347920	90347920	G	A	intronic	ANPEP	NA	NA	NA	intronic	ENSG00000166825	NA	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs41276920	0.05	0.05	0.041	0.0405351	0.0915	0.001	0.0389	0.0287	0.046	0.09	0.0035	0.03	0.04	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.427319	NA	NA	NA	NA	NA	0.094	NA	3.9085
1261	17	45096867	45096867	A	G	intergenic	RPRML,CDC27	dist=40253;dist=98444	NA	NA	ncRNA_exonic	ENSG00000263142	NA	NA	NA	NA	NA	17q21.32	NA	NA	NA	NA	rs55858176	0.08	0.08	0.049	0.109225	0.0915	0.1468	0.1052	0.0076	0.229	0.08	0.13	0.07	0.01	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.071193	NA	NA	NA	NA	ID=COSN165443;OCCURENCE=1(breast)	0.043	NA	3.9085
1261	11	6591380	6591380	G	C	intronic	DNHD1	NA	NA	NA	intronic	ENSG00000179532	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs7942310	0.11	0.11	0.118	0.125998	0.0239	NA	0.0504	0.4304	0.0031	0.02	NA	0.05	0.42	0.0475	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.194516	NA	NA	0.020169	0.324927	NA	0.13	NA	3.908431
1261	10	3147192	3147192	G	A	intronic	PFKP	NA	NA	NA	UTR5	ENSG00000067057	ENST00000415005:c.-143G>A	NA	NA	NA	NA	10p15.2	NA	NA	NA	NA	rs4256893	0.34	0.34	0.327	0.346046	0.2584	0.5397	0.3199	0.2716	0.3558	0.25	0.57	0.26	0.26	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.494118	NA	NA	NA	NA	NA	0.203	NA	3.9082667
1261	15	80762804	80762804	C	G	intronic	ARNT2	NA	NA	NA	intronic	ENSG00000172379	NA	NA	NA	NA	NA	15q25.1	NA	NA	NA	NA	rs8033507	0.15	0.15	0.158	0.182708	0.0129	0.1518	0.0692	0.4221	0.1462	0.01	0.18	0.06	0.4	0.0711	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.267927	NA	NA	0.008372	0.358602	NA	0.181	NA	3.907628
1261	1	150956947	150956947	C	T	intronic	ANXA9	NA	NA	NA	intronic	ENSG00000143412	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs2305815	0.08	0.08	0.06	0.0786741	0.0924	0.1617	0.0548	0.003	0.0982	0.08	0.17	0.05	0.002	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.639082	NA	NA	NA	NA	NA	0.065	NA	3.9076
1261	2	101564628	101564628	A	C	intronic	NPAS2	NA	NA	NA	intronic	ENSG00000170485	NA	NA	NA	NA	NA	2q11.2	NA	NA	NA	NA	rs10207725	NA	NA	NA	0.178115	0.0924	0.4097	0.3329	0.028	0.1207	NA	NA	NA	NA	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.695358	NA	NA	NA	NA	NA	0.138	NA	3.9076
1261	3	75397013	75397013	C	T	intergenic	MIR4444-1,FAM86DP	dist=133314;dist=73690	NA	NA	ncRNA_exonic	ENSG00000243674	NA	NA	NA	NA	NA	3p12.3	NA	NA	NA	NA	rs6762507	0.15	0.15	0.159	0.194888	0.0924	0.0476	0.1009	0.4259	0.2065	0.09	0.06	0.11	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.536258	NA	NA	NA	NA	NA	0.08	NA	3.9076
1261	7	148947698	148947698	A	G	intronic	ZNF212	NA	NA	NA	intronic	ENSG00000170260	NA	NA	NA	NA	NA	7q36.1	NA	NA	NA	NA	rs4725801	0.15	0.15	0.099	0.155751	0.0924	0.247	0.268	0.0045	0.2515	0.1	0.26	0.24	0.0041	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.031066	NA	NA	NA	NA	NA	0.13	NA	3.9076
1261	8	2043982	2043982	C	T	intronic	MYOM2	NA	NA	NA	intronic	ENSG00000036448	NA	NA	NA	NA	NA	8p23.3	NA	NA	NA	NA	rs79549508	0.08	0.08	0.075	0.0626997	0.0924	0.0823	0.0677	0.0522	0.0225	0.09	0.1	0.09	0.04	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.853431	NA	NA	NA	NA	NA	0.022	NA	3.9076
1261	11	48968045	48968045	G	A	intergenic	OR4A47,TRIM49B	dist=456771;dist=85107	NA	NA	ncRNA_intronic	ENSG00000249910	NA	NA	NA	NA	NA	11p11.12	NA	NA	NA	NA	rs1857789	0.08	0.08	0.058	0.114018	0.0924	0.2143	0.0793	0.0038	0.2065	0.09	0.14	0.07	0.01	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.007565	NA	NA	NA	NA	NA	NA	NA	3.9076
1261	13	113474348	113474348	C	T	intronic	ATP11A	NA	NA	NA	intronic	ENSG00000068650	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs9603957	0.1	0.1	0.107	0.103235	0.0924	0.0417	0.0576	0.1974	0.0828	0.09	0.04	0.07	0.2	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.486977	NA	NA	NA	NA	NA	0.08	NA	3.9076
1261	16	1004757	1004757	C	T	intronic	LMF1	NA	NA	NA	intronic	ENSG00000103227	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs113750251	0.06	0.06	0.048	0.0736821	0.0924	0.0367	0.0576	0.025	0.1697	0.09	0.03	0.07	0.03	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.202481	NA	NA	NA	NA	NA	0.058	NA	3.9076
1261	21	47845942	47845942	T	C	intronic	PCNT	NA	NA	NA	intronic	ENSG00000160299	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs2330436	0.16	0.16	0.151	0.178514	0.0924	0.004	0.0937	0.4871	0.09	0.09	0.0035	0.1	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.118545	NA	NA	NA	NA	NA	0.196	NA	3.9076
1261	21	37092980	37092980	G	A	upstream	MIR802	NA	NA	NA	ncRNA_intronic	ENSG00000230794	NA	NA	NA	NA	NA	21q22.12	NA	NA	Name=4	NA	rs9981293	0.36	0.36	0.343	0.348243	0.4145	0.495	0.3646	0.0658	0.499	0.41	0.5	0.39	0.09	0.4155	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.809119	NA	NA	0.42909	0.129783	NA	0.377	NA	3.9075766
1261	1	24859767	24859767	A	C	intronic	RCAN3	NA	NA	NA	intronic	ENSG00000117602	NA	NA	NA	NA	NA	1p36.11	NA	NA	NA	NA	rs12061734	0.13	0.13	NA	0.157348	0.0278	0.0169	0.0576	0.4955	0.0491	0.02	0.01	0.07	0.49	0.0649	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.034674	NA	NA	NA	NA	NA	0.152	NA	3.9073
1261	14	101406022	101406022	T	A	downstream	SNORD113-6	NA	NA	NA	ncRNA_intronic	ENSG00000225746	NA	NA	NA	NA	NA	14q32.31	NA	NA	NA	NA	rs1951025	0.14	0.14	0.127	0.110623	0.2594	0.0645	0.1412	0.0121	0.1166	0.25	0.07	0.17	0.01	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.028038	NA	NA	NA	NA	NA	0.232	NA	3.9072666
1261	18	61602495	61602495	C	T	downstream	SERPINB10	NA	NA	NA	UTR3	ENSG00000242550	ENST00000238508:c.*19C>T	NA	NA	NA	NA	18q22.1	NA	NA	NA	NA	rs17072209	0.12	0.12	0.112	0.117812	0.0249	0.1935	0.0648	0.1944	0.0695	0.03	0.2	0.06	0.21	0.0547	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.695643	NA	NA	0.013143	0.162807	NA	0.123	NA	3.907257
1261	19	52825235	52825235	A	G	exonic	ZNF480	NA	synonymous SNV	ZNF480:NM_144684:exon5:c.A732G:p.S244S	exonic	ENSG00000198464	NA	synonymous SNV	ENSG00000198464:ENST00000335090:exon3:c.A501G:p.S167S,ENSG00000198464:ENST00000334564:exon4:c.A603G:p.S201S,ENSG00000198464:ENST00000468240:exon5:c.A732G:p.S244S,ENSG00000198464:ENST00000595962:exon5:c.A732G:p.S244S	NA	NA	19q13.41	NA	NA	NA	NA	rs8102373	0.53	0.53	0.507	0.526358	0.6123	0.3998	0.5101	0.5371	0.5654	0.62	0.4	0.53	0.53	0.5615	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.462032	NA	NA	0.585698	0.526555	NA	0.536	NA	3.9071686
1261	19	51500901	51500901	C	T	intronic	KLK8	NA	NA	NA	ncRNA_intronic	ENSG00000267879	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs1654539	0.43	0.43	0.424	0.427516	0.4264	0.2411	0.4813	0.6422	0.2924	0.43	0.26	0.49	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.001435	NA	NA	NA	NA	NA	0.522	NA	3.9069333
1261	1	15772057	15772057	G	T	intronic	CTRC	NA	NA	NA	intronic	ENSG00000162438	NA	NA	NA	NA	NA	1p36.21	NA	NA	Name=3	NA	rs10927786	0.35	0.35	0.346	0.357628	0.3648	0.25	0.3602	0.416	0.3804	0.37	0.28	0.36	0.42	0.3655	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.14778	NA	NA	0.362779	0.386291	NA	0.297	NA	3.906921
1261	3	47276968	47276968	C	T	ncRNA_intronic	KIF9-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000227398	NA	NA	NA	NA	NA	3p21.31	NA	NA	Name=53	NA	rs2276854	0.57	0.57	0.548	0.562899	0.5994	0.5357	0.5562	0.5356	0.5951	0.6	0.53	0.57	0.55	0.574	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.621469	NA	NA	0.586628	0.537676	NA	0.623	NA	3.9066386
1261	7	97946450	97946450	C	A	intronic	BAIAP2L1	NA	NA	NA	intronic	ENSG00000006453	NA	NA	NA	NA	NA	7q21.3	NA	NA	NA	NA	rs1631779	0.1	0.1	0.111	0.144569	0.0934	0.0456	0.0865	0.2042	0.2597	0.1	0.04	0.1	0.18	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.472263	NA	NA	NA	NA	NA	0.196	NA	3.9066
1261	9	131599311	131599311	G	A	intronic	CCBL1	NA	NA	NA	intronic	ENSG00000171097	NA	NA	NA	NA	NA	9q34.11	NA	NA	NA	NA	rs2997903	0.1	0.1	0.081	0.0878594	0.0934	0.0933	0.0648	0.093	0.0859	0.09	0.11	0.08	0.1	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.075183	NA	NA	NA	NA	NA	0.094	NA	3.9066
1261	21	47766004	47766004	T	G	intronic	PCNT	NA	NA	NA	intronic	ENSG00000160299	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs2839216	0.11	0.11	0.132	0.14996	0.0249	0.004	0.0591	0.4516	0.0859	0.02	0.0017	0.06	0.43	0.055	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.219841	NA	NA	0.013721	0.376305	NA	0.145	NA	3.906379
1261	10	66586374	66586374	G	A	ncRNA_exonic	ANXA2P3	NA	NA	NA	downstream	ENSG00000216740	NA	NA	NA	NA	NA	10q21.3	NA	NA	NA	NA	rs16920432	0.28	0.28	0.254	0.260783	0.2604	0.4712	0.2939	0.062	0.2894	0.27	0.5	0.22	0.08	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.282907	NA	NA	NA	NA	NA	0.181	NA	3.9062666
1261	13	30784437	30784437	A	G	intronic	KATNAL1	NA	NA	NA	intronic	ENSG00000102781	NA	NA	NA	NA	NA	13q12.3	NA	NA	NA	NA	rs75470540	0.02	0.02	0.013	0.0107827	0.0328	NA	0.0216	0.0023	0.0031	0.03	NA	0.02	0.002	0.0241	0.037	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.637884	1.637884	NA	0.036977	0.008852	NA	NA	NA	3.906123
1261	8	70772088	70772088	T	C	intergenic	SLCO5A1,PRDM14	dist=24789;dist=191798	NA	NA	ncRNA_exonic	ENSG00000255107	NA	NA	NA	NA	NA	8q13.3	NA	NA	NA	NA	rs16936497	0.14	0.14	0.144	0.157149	0.0944	0.003	0.0879	0.4387	0.0491	0.09	0.0017	0.1	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.603635	NA	NA	NA	NA	NA	0.145	NA	3.9056
1261	1	160091136	160091136	T	C	intronic	ATP1A2	NA	NA	NA	intronic	ENSG00000018625	NA	NA	NA	NA	NA	1q23.2	NA	NA	NA	NA	rs17846705	0.07	0.07	0.05	0.0628994	0.0944	0.0595	0.1138	0.0053	0.0757	0.1	0.05	0.11	0.01	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.79197	NA	NA	NA	NA	NA	0.138	NA	3.9056
1261	2	43735713	43735713	C	T	intronic	THADA	NA	NA	NA	intronic	ENSG00000115970	NA	NA	NA	NA	NA	2p21	NA	NA	NA	NA	rs6761129	0.15	0.15	0.165	0.16893	0.0944	0.006	0.1081	0.4032	0.1401	0.09	0.01	0.12	0.44	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.304895	NA	NA	NA	NA	NA	0.203	NA	3.9056
1261	9	19352260	19352260	A	T	intronic	DENND4C	NA	NA	NA	intronic	ENSG00000137145	NA	NA	NA	NA	NA	9p22.1	NA	NA	NA	NA	rs10114039	0.16	0.16	0.188	0.21246	0.0944	0.0169	0.1254	0.5197	0.182	0.08	0.02	0.11	0.5	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.020026	NA	NA	NA	NA	NA	0.275	NA	3.9056
1261	15	60734697	60734697	A	G	exonic	NARG2	NA	synonymous SNV	NARG2:NM_001018089:exon12:c.T1932C:p.Y644Y,NARG2:NM_024611:exon12:c.T2343C:p.Y781Y	exonic	ENSG00000128915	NA	synonymous SNV	ENSG00000128915:ENST00000261520:exon12:c.T2343C:p.Y781Y,ENSG00000128915:ENST00000439632:exon12:c.T1932C:p.Y644Y	NA	NA	15q22.2	NA	NA	NA	NA	rs1063100	0.58	0.58	0.535	0.594649	0.5726	0.8244	0.6513	0.2534	0.8016	0.58	0.85	0.64	0.25	0.6153	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.749981	NA	NA	0.573505	0.287562	NA	0.391	NA	3.9052616
1261	19	33117775	33117775	G	C	intronic	ANKRD27	NA	NA	NA	intronic	ENSG00000105186	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs62124306	0.05	0.05	0.056	0.0638978	0.0249	0.0337	0.0274	0.1377	0.0613	0.02	0.04	0.03	0.12	0.0479	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.080125	NA	NA	0.022098	0.11212	NA	0.072	NA	3.905102
1262	18	33713287	33713287	T	A	intronic	ELP2	NA	NA	NA	intronic	ENSG00000134759	NA	NA	NA	Score=459;Name=lod=98	NA	18q12.2	NA	NA	NA	NA	rs1785905	0.35	0.35	0.333	0.320487	0.3797	0.2014	0.3847	0.382	0.2536	0.4	0.19	0.43	0.39	0.3443	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.880824	1.880824	NA	0.371047	0.366773	NA	0.326	NA	3.904953
1262	17	38349741	38349741	C	G	intronic	RAPGEFL1	NA	NA	NA	intronic	ENSG00000108352	NA	NA	NA	NA	NA	17q21.1	NA	NA	NA	NA	rs62065226	0.03	0.03	0.021	0.0231629	0.0527	0.001	0.0447	0.0015	0.0297	0.06	0.0017	0.05	0.0041	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.52294	NA	NA	0.042426	0.013006	NA	0.029	NA	3.904874
1262	19	41932120	41932120	C	T	exonic	B3GNT8	NA	synonymous SNV	B3GNT8:NM_198540:exon3:c.G564A:p.V188V	exonic	ENSG00000177191	NA	synonymous SNV	ENSG00000177191:ENST00000321702:exon3:c.G564A:p.V188V	NA	NA	19q13.2	NA	NA	NA	NA	rs284661	0.49	0.49	0.469	0.490815	0.5895	0.4306	0.4467	0.407	0.5961	0.58	0.46	0.51	0.39	0.5649	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.459134	NA	NA	0.607442	0.439401	NA	0.29	NA	3.9048246
1262	19	39976464	39976464	C	G	intronic	TIMM50	NA	NA	NA	intronic	ENSG00000105197	NA	NA	NA	Score=550;Name=lod=229	NA	19q13.2	NA	NA	NA	NA	rs4803245	0.59	0.59	0.613	NA	NA	NA	NA	NA	NA	0.56	0.51	0.55	0.78	0.5737	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.312158	1.312158	NA	0.521628	0.754426	NA	0.536	NA	3.904672
1262	1	6170353	6170353	C	T	intronic	CHD5	NA	NA	NA	intronic	ENSG00000116254	NA	NA	NA	NA	NA	1p36.31	NA	NA	NA	NA	rs2281303	0.15	0.15	0.126	0.170128	0.0954	0.1974	0.1556	0.1755	0.2219	0.1	0.19	0.17	0.17	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.416907	NA	NA	NA	NA	NA	0.225	NA	3.9046
1262	7	75187621	75187621	A	G	intronic	HIP1	NA	NA	NA	intronic	ENSG00000127946	NA	NA	NA	NA	NA	7q11.23	NA	NA	NA	NA	rs7806452	0.14	0.14	0.134	0.132788	0.0954	0.2708	0.0764	0.0953	0.1196	0.09	0.28	0.1	0.09	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.422673	NA	NA	NA	NA	NA	0.08	NA	3.9046
1262	11	72012682	72012682	A	G	intronic	CLPB	NA	NA	NA	intronic	ENSG00000162129	NA	NA	NA	NA	NA	11q13.4	NA	NA	NA	NA	rs3750906	0.2	0.2	0.218	0.214457	0.0954	0.2192	0.1311	0.4508	0.0716	0.09	0.2	0.14	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.616293	NA	NA	NA	NA	NA	0.196	NA	3.9046
1262	14	39681051	39681051	T	C	intergenic	PNN,MIA2	dist=28629;dist=22074	NA	NA	ncRNA_exonic	ENSG00000258671	NA	NA	NA	NA	NA	14q21.1	NA	NA	NA	NA	rs28547333	0.07	0.07	0.065	0.0826677	0.0954	0.0952	0.0648	0.0038	0.1759	0.1	0.09	0.08	0.01	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.614546	NA	NA	NA	NA	NA	0.116	NA	3.9046
1262	17	73519668	73519668	G	A	intronic	TSEN54	NA	NA	NA	intronic	ENSG00000182173	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs72851947	0.07	0.07	0.078	0.0720847	0.0954	NA	0.0634	0.0998	0.091	0.09	NA	0.1	0.11	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.159515	NA	NA	NA	NA	NA	0.181	NA	3.9046
1262	3	111851890	111851890	A	G	intronic	GCSAM	NA	NA	NA	intronic	ENSG00000174500	NA	NA	NA	NA	NA	3q13.2	NA	Name=EBF1_(C-8),Rad21,NFKB,BCL3,Pol2-4H8,EBF	NA	NA	rs879652	0.36	0.36	0.338	0.313698	0.3787	0.4048	0.4006	0.1384	0.3282	0.39	0.47	0.4	0.15	0.3528	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.038624	NA	NA	0.363953	0.162052	NA	0.312	NA	3.904547
1262	9	104238142	104238142	A	C	UTR3	TMEM246	NM_032342:c.*21T>G	NA	NA	ncRNA_UTR3	ENSG00000165152	NA	NA	NA	NA	NA	9q31.1	NA	NA	NA	NA	rs15889	0.3	0.3	0.292	0.322684	0.173	0.3998	0.3588	0.388	0.2832	0.17	0.42	0.3	0.37	0.2472	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.034825	NA	NA	0.175465	0.347935	NA	0.29	NA	3.904335
1262	8	7154627	7154627	C	T	intergenic	LOC349196,FAM66B	dist=10747;dist=4506	NA	NA	ncRNA_exonic	ENSG00000233295	NA	NA	NA	NA	NA	8p23.1	NA	NA	NA	NA	rs36116945	0.07	0.07	0.083	0.0816693	0.0497	0.0387	0.0562	0.205	0.0102	0.04	0.04	0.07	0.18	0.0461	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.322213	NA	0.07	NA	NA	NA	0.029	NA	3.9042
1262	11	124135438	124135438	G	A	exonic	OR8G5	NA	nonsynonymous SNV	OR8G5:NM_001005198:exon1:c.G716A:p.G239E	ncRNA_exonic	ENSG00000255298	NA	NA	NA	NA	NA	11q24.2	NA	NA	NA	NA	rs2512167	0.5	0.5	0.461	0.438498	0.5527	0.5833	0.5591	0.292	0.2843	0.54	0.59	0.54	0.3	0.4975	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.472286	NA	NA	0.54568	0.331081	NA	0.304	NA	3.90412
1262	6	74533192	74533192	T	G	exonic	CD109	NA	synonymous SNV	CD109:NM_001159588:exon32:c.T3942G:p.A1314A,CD109:NM_001159587:exon33:c.T4122G:p.A1374A,CD109:NM_133493:exon33:c.T4173G:p.A1391A	exonic	ENSG00000156535	NA	synonymous SNV	ENSG00000156535:ENST00000422508:exon32:c.T3942G:p.A1314A,ENSG00000156535:ENST00000287097:exon33:c.T4173G:p.A1391A,ENSG00000156535:ENST00000437994:exon33:c.T4122G:p.A1374A	Score=466;Name=lod=104	NA	6q13	NA	NA	NA	NA	rs2917887	0.88	0.88	0.849	0.844649	0.9294	0.9514	0.928	0.6619	0.8354	0.94	0.94	0.92	0.7	0.9026	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.699934	NA	NA	0.930698	0.720154	NA	0.899	NA	3.9039686
1262	8	142445095	142445095	C	T	intronic	MROH5	NA	NA	NA	ncRNA_exonic	ENSG00000271959	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs28592919	0.29	0.29	0.237	0.302516	0.4294	0.2718	0.2781	0.1399	0.4407	0.41	0.27	0.31	0.13	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.973204	NA	NA	NA	NA	NA	NA	NA	3.9039333
1262	8	142445097	142445097	A	T	intronic	MROH5	NA	NA	NA	ncRNA_exonic	ENSG00000271959	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs28590477	0.29	0.29	0.255	0.302516	0.4294	0.2718	0.2781	0.1399	0.4407	0.41	0.27	0.31	0.13	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.133934	NA	NA	NA	NA	NA	NA	NA	3.9039333
1262	2	58390538	58390538	T	C	intronic	FANCL	NA	NA	NA	UTR3	ENSG00000115392	ENST00000540646:c.*256A>G	NA	NA	NA	NA	2p16.1	NA	NA	NA	NA	rs10445895	0.06	0.06	0.058	0.047524	0.0875	0.0169	0.0735	0.0431	0.0256	0.08	0.02	0.08	0.05	0.076	0.099	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.154287	NA	NA	0.099302	0.04108	NA	0.116	NA	3.9038647
1262	12	114397634	114397634	A	G	intronic	RBM19	NA	NA	NA	intronic	ENSG00000122965	NA	NA	NA	NA	NA	12q24.21	NA	NA	NA	NA	rs117916372	0.08	0.08	0.048	0.077476	0.0268	0.1131	0.2421	0.0461	0.0184	0.03	0.13	0.19	0.03	0.0498	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.840397	NA	NA	0.019651	0.034044	NA	0.029	NA	3.903749
1262	6	17781577	17781577	T	C	intronic	KIF13A	NA	NA	NA	intronic	ENSG00000137177	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs41267714	0.02	0.02	0.011	0.00958466	0.0338	NA	0.013	NA	0.0051	0.04	NA	0.02	NA	0.027	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.062853	NA	NA	0.035584	0.011206	NA	0.022	NA	3.903616
1262	2	74512808	74512808	G	A	intronic	SLC4A5	NA	NA	NA	intronic	ENSG00000188687,ENSG00000264324	NA	NA	NA	NA	NA	2p13.1	NA	NA	NA	NA	rs12617294	0.12	0.12	0.128	0.147165	0.0964	0.2083	0.0836	0.1717	0.1483	0.08	0.2	0.09	0.12	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.713075	NA	NA	NA	NA	NA	0.145	NA	3.9036
1262	3	154034043	154034043	T	C	intronic	DHX36	NA	NA	NA	intronic	ENSG00000174953	NA	NA	NA	NA	NA	3q25.2	NA	NA	NA	NA	rs3817166	0.22	0.22	0.204	0.205471	0.0964	0.371	0.2968	0.1415	0.1687	0.09	0.41	0.28	0.15	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.514977	NA	NA	NA	NA	NA	0.196	NA	3.9036
1262	5	78952691	78952691	G	A	intronic	PAPD4	NA	NA	NA	intronic	ENSG00000164329	NA	NA	NA	NA	NA	5q14.1	NA	NA	NA	NA	rs67039976	0.22	0.22	0.221	0.229633	0.0964	0.1359	0.2291	0.4735	0.1339	0.1	0.16	0.22	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.318416	1.318416	NA	NA	NA	NA	0.283	NA	3.9036
1262	6	7605560	7605560	T	C	intronic	SNRNP48	NA	NA	NA	intronic	ENSG00000168566	NA	NA	NA	NA	NA	6p24.3	NA	NA	NA	NA	rs7747290	0.12	0.12	0.129	0.125399	0.0964	NA	0.0735	0.3525	0.0143	0.09	NA	0.07	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.06976	NA	NA	NA	NA	NA	0.188	NA	3.9036
1262	6	29591864	29591864	G	A	intronic	GABBR1	NA	NA	NA	intronic	ENSG00000204681	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs3025626	0.09	0.09	0.073	0.105631	0.0964	0.12	0.0793	0.0961	0.1319	0.08	0.12	0.08	0.09	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.819766	NA	NA	NA	NA	NA	0.123	NA	3.9036
1262	9	4622312	4622312	T	C	intronic	SPATA6L	NA	NA	NA	intronic	ENSG00000106686	NA	NA	NA	NA	NA	9p24.1	NA	NA	NA	NA	rs10758638	0.22	0.22	0.219	0.244609	0.0964	0.2758	0.2205	0.351	0.2382	0.1	0.3	0.23	0.31	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.595491	NA	NA	NA	NA	NA	0.254	NA	3.9036
1262	11	43340429	43340429	G	C	intronic	API5	NA	NA	NA	intronic	ENSG00000166181	NA	NA	NA	NA	NA	11p12	NA	NA	NA	NA	rs2270573	0.09	0.09	0.045	0.0864617	0.0964	0.0317	0.2565	0.0151	0.1084	0.1	0.03	0.23	0.02	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.720519	NA	NA	NA	NA	NA	0.065	NA	3.9036
1262	11	123994008	123994008	T	C	intronic	VWA5A	NA	NA	NA	intronic	ENSG00000110002	NA	NA	NA	NA	NA	11q24.2	NA	NA	NA	NA	rs880321	0.07	0.07	0.063	0.0732827	0.0964	0.0397	0.0576	0.0507	0.1258	0.09	0.05	0.05	0.05	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.000316	NA	NA	NA	NA	NA	0.029	NA	3.9036
1262	14	95911060	95911060	C	T	intronic	SYNE3	NA	NA	NA	intronic	ENSG00000176438	NA	NA	NA	NA	NA	14q32.13	NA	NA	NA	NA	rs8007261	0.06	0.06	0.063	0.0698882	0.0964	0.002	0.062	0.0681	0.1207	0.1	0.0017	0.08	0.08	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.315541	NA	NA	NA	NA	NA	0.138	NA	3.9036
1262	22	45927045	45927045	T	C	intronic	FBLN1	NA	NA	NA	intronic	ENSG00000077942	NA	NA	NA	NA	NA	22q13.31	NA	NA	NA	NA	rs6006767	0.1	0.1	0.078	0.109026	0.0964	0.0972	0.1556	0.0514	0.1789	0.11	0.1	0.14	0.05	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.305012	NA	NA	NA	NA	ID=COSN166782;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.196	NA	3.9036
1262	3	98531342	98531342	A	G	intronic	DCBLD2	NA	NA	NA	intronic	ENSG00000057019	NA	NA	NA	Score=681;Name=lod=784	NA	3q12.1	NA	NA	NA	NA	rs9814819	0.29	0.29	0.287	0.310503	0.3429	0.2252	0.3242	0.3366	0.32	0.36	0.19	0.31	0.29	0.3866	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.8463	2.8463	NA	0.366961	0.342802	NA	0.29	NA	3.903539
1262	6	17794433	17794433	C	T	intronic	KIF13A	NA	NA	NA	intronic	ENSG00000137177	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs77012093	0.02	0.02	0.015	0.00958466	0.0338	NA	0.013	NA	0.0051	0.04	NA	0.02	NA	0.0265	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.474614	1.474614	NA	0.036195	0.011413	NA	0.022	NA	3.903505
1262	10	44868864	44868864	C	T	intronic	CXCL12	NA	NA	NA	intronic	ENSG00000107562	NA	NA	NA	NA	NA	10q11.21	NA	NA	NA	NA	rs266090	0.03	0.03	0.021	0.0335463	0.0517	0.001	0.0216	0.0174	0.0787	0.06	NA	0.02	0.02	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.921962	NA	NA	0.04494	0.020231	NA	0.036	NA	3.90336
1262	X	2692710	2692710	A	G	ncRNA_intronic	XGPY2	NA	NA	NA	intronic	ENSG00000124343	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs2259750	0.29	0.29	0.24801	NA	NA	NA	NA	NA	NA	0.23	0.49	0.13	0.27	0.2421	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.779605	NA	NA	0.187966	0.190422	NA	0.217	NA	3.9032673
1262	6	17817503	17817503	G	A	intronic	KIF13A	NA	NA	NA	intronic	ENSG00000137177	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs41267718	0.02	0.02	0.01	0.00998403	0.0348	0.001	0.013	NA	0.0051	0.04	0.0035	0.02	NA	0.0259	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.567592	NA	NA	0.0361	0.010864	NA	0.022	NA	3.9032
1262	19	2208859	2208859	T	C	intronic	DOT1L	NA	NA	NA	intronic	ENSG00000104885	NA	NA	NA	NA	NA	19p13.3	NA	Name=CTCF,CTCF_(C-20)	NA	NA	rs2301799	0.45	0.45	0.428	0.411342	0.5626	0.4454	0.4625	0.2186	0.4448	0.56	0.49	0.49	0.22	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.218846	NA	NA	0.534255	0.268786	NA	0.464	NA	3.903145
1262	4	2955145	2955145	T	C	intronic	NOP14	NA	NA	NA	ncRNA_intronic	ENSG00000249673	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs1475977	0.42	0.42	0.405	0.40016	0.4304	0.1875	0.4107	0.6747	0.2096	0.44	0.18	0.42	0.67	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.233071	NA	NA	NA	NA	NA	0.326	NA	3.9029333
1262	4	2955465	2955465	T	C	intronic	NOP14	NA	NA	NA	ncRNA_intronic	ENSG00000249673	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs1475975	0.42	0.42	0.402	0.400559	0.4304	0.1875	0.4107	0.6762	0.2096	0.44	0.18	0.42	0.67	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.032141	NA	NA	NA	NA	NA	0.341	NA	3.9029333
1262	6	7331819	7331819	C	T	intronic	CAGE1	NA	NA	NA	ncRNA_exonic	ENSG00000219375	NA	NA	NA	NA	NA	6p24.3	NA	NA	NA	NA	rs2764096	0.56	0.56	0.612	0.592452	0.4304	0.5268	0.5173	0.9115	0.4489	0.43	0.51	0.49	0.89	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.761416	NA	NA	NA	NA	NA	0.543	NA	3.9029333
1262	16	703738	703738	G	A	intronic	WDR90	NA	NA	NA	intronic	ENSG00000161996	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs113601268	0.03	0.03	0.026	0.0321486	0.0288	0.005	0.0115	0.062	0.0378	0.03	0.01	0.01	0.06	0.0319	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.028082	NA	NA	0.036495	0.050472	NA	0.029	NA	3.902805
1262	2	43903483	43903483	T	C	intronic	PLEKHH2	NA	NA	NA	intronic	ENSG00000152527	NA	NA	NA	NA	NA	2p21	NA	Name=TAF1,E2F6_(H-50),GABP,Pol2,YY1_(C-20),Sin3Ak-20,Pol2-4H8,ZBTB7A_(SC-34508),ELF1_(SC-631),HEY1,SETDB1	Name=109	NA	rs4952995	0.57	0.57	0.559	0.560503	0.7187	0.2619	0.5634	0.6142	0.6309	0.72	0.27	0.64	0.62	0.6542	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.013042	NA	NA	0.724455	0.648873	NA	0.558	NA	3.902645
1262	1	3784454	3784454	T	C	intronic	DFFB	NA	NA	NA	intronic	ENSG00000169598	NA	NA	NA	NA	NA	1p36.32	NA	NA	NA	NA	rs76754622	0.09	0.09	0.098	0.0874601	0.0974	0.002	0.0764	0.1619	0.0726	0.09	0.0017	0.09	0.2	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.416685	NA	NA	NA	NA	NA	0.065	NA	3.9026
1262	6	29576198	29576198	A	G	intronic	GABBR1	NA	NA	NA	intronic	ENSG00000204681	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs29261	0.09	0.09	0.074	0.105631	0.0974	0.12	0.0807	0.0946	0.1319	0.08	0.12	0.08	0.09	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.16521	3.16521	NA	NA	NA	NA	0.123	NA	3.9026
1262	6	29576590	29576590	G	A	intronic	GABBR1	NA	NA	NA	intronic	ENSG00000204681	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs29263	0.09	0.09	0.063	0.105631	0.0974	0.12	0.0807	0.0946	0.1319	0.08	0.12	0.08	0.09	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.832341	NA	NA	NA	NA	NA	NA	NA	3.9026
1262	6	29576592	29576592	A	G	intronic	GABBR1	NA	NA	NA	intronic	ENSG00000204681	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs29262	0.09	0.09	0.061	0.105631	0.0974	0.12	0.0807	0.0946	0.1319	0.08	0.12	0.08	0.09	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.912233	NA	NA	NA	NA	NA	NA	NA	3.9026
1262	6	29581343	29581343	T	A	intronic	GABBR1	NA	NA	NA	intronic	ENSG00000204681	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs29224	0.09	0.09	0.075	0.108826	0.0974	0.122	0.0807	0.0946	0.1462	0.08	0.12	0.08	0.09	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.698537	1.698537	NA	NA	NA	NA	0.123	NA	3.9026
1262	9	79867082	79867082	A	C	intronic	VPS13A	NA	NA	NA	intronic	ENSG00000197969	NA	NA	NA	NA	NA	9q21.2	NA	NA	NA	NA	rs17337881	0.09	0.09	0.09	0.0738818	0.0974	0.123	0.062	0.0356	0.0593	0.11	0.13	0.06	0.05	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.377918	NA	NA	NA	NA	NA	0.051	NA	3.9026
1262	9	98239730	98239730	G	A	intronic	PTCH1	NA	NA	NA	intronic	ENSG00000185920	NA	NA	NA	NA	NA	9q22.32	NA	NA	NA	NA	rs28448271	0.1	0.1	0.105	0.0876597	0.0974	0.0843	0.0677	0.1309	0.0368	0.11	0.1	0.07	0.12	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.189916	NA	NA	NA	NA	NA	0.058	NA	3.9026
1262	15	90344266	90344266	C	G	intronic	ANPEP	NA	NA	NA	intronic	ENSG00000166825	NA	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs55653418	0.05	0.05	0.051	0.0471246	0.0974	0.001	0.0504	0.0356	0.0562	0.1	0.0035	0.04	0.04	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.51936	NA	NA	NA	NA	NA	0.094	NA	3.9026
1262	16	48180110	48180110	C	T	intronic	ABCC12	NA	NA	NA	intronic	ENSG00000140798	NA	NA	NA	NA	NA	16q12.1	NA	NA	NA	NA	rs16945894	0.08	0.08	0.066	0.0507188	0.0974	0.0952	0.0519	0.0045	0.0184	0.09	0.11	0.09	0.0041	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.258128	NA	NA	NA	NA	NA	0.029	NA	3.9026
1262	6	35260615	35260615	T	C	intronic	ZNF76	NA	NA	NA	intronic	ENSG00000065029	NA	NA	NA	NA	NA	6p21.31	NA	NA	NA	NA	rs4713848	0.11	0.11	0.096	0.113419	0.0189	0.3284	0.0965	0.0416	0.0982	0.03	0.3	0.08	0.04	0.0589	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.076309	2.076309	NA	0.019767	0.034498	NA	0.051	NA	3.902433
1262	19	2037846	2037846	A	C	UTR3	MKNK2	NM_199054:c.*1766T>G	NA	NA	UTR3	ENSG00000099875	ENST00000591601:c.*1766T>G,ENST00000250896:c.*1766T>G	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs1064543	0.43	0.43	0.398	NA	NA	NA	NA	NA	NA	0.48	0.5	0.44	0.27	0.431	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.603091	NA	NA	NA	NA	NA	0.333	NA	3.9023334
1262	19	652888	652888	C	T	intronic	RNF126	NA	NA	NA	intronic	ENSG00000070423	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs72974187	0.02	0.02	0.02	0.0221645	0.0358	0.0298	0.0173	0.0023	0.0307	0.04	0.02	0.02	NA	0.0285	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.198121	NA	NA	0.033605	0.007036	NA	0.058	NA	3.902095
1262	6	35260858	35260858	G	A	intronic	ZNF76	NA	NA	NA	intronic	ENSG00000065029	NA	NA	NA	NA	NA	6p21.31	NA	NA	NA	NA	rs4711413	0.11	0.11	0.1	0.113419	0.0189	0.3284	0.0965	0.0416	0.0982	0.03	0.31	0.08	0.04	0.0592	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.422376	NA	NA	0.019916	0.03391	NA	0.051	NA	3.901984
1262	9	113489871	113489871	A	G	intronic	MUSK	NA	NA	NA	ncRNA_exonic	ENSG00000223918	NA	NA	NA	NA	NA	9q31.3	NA	NA	NA	NA	rs10817085	0.32	0.32	0.33	0.285942	0.4314	0.2183	0.2954	0.292	0.1912	0.43	0.2	0.34	0.29	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.120852	NA	NA	NA	NA	NA	0.246	NA	3.9019333
1262	10	134912098	134912098	C	T	intronic	GPR123	NA	NA	NA	intronic	ENSG00000197177	NA	NA	NA	NA	NA	10q26.3	NA	NA	NA	NA	rs4838796	0.02	0.02	0.012	0.0133786	0.0388	0.004	0.0144	0.0008	0.0133	0.04	0.0035	0.02	0.0041	0.0263	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.174753	NA	NA	0.033147	0.008398	NA	0.022	NA	3.901753
1262	2	223786263	223786263	G	A	intronic	ACSL3	NA	NA	NA	intronic	ENSG00000123983	NA	NA	NA	NA	NA	2q36.1	NA	NA	NA	NA	rs80245918	0.05	0.05	0.044	0.0433307	0.0984	0.001	0.0447	0.0234	0.0562	0.09	0.0017	0.04	0.03	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.669777	NA	NA	NA	NA	NA	0.043	NA	3.9016
1262	15	76075343	76075343	G	A	intergenic	MIR4313,UBE2Q2	dist=20687;dist=60279	NA	NA	ncRNA_exonic	ENSG00000187812	NA	NA	NA	NA	NA	15q24.2	NA	NA	NA	NA	rs79164384	0.17	0.17	0.168	0.176318	0.0984	0.3948	0.1599	0.0038	0.2761	0.1	0.4	0.15	0.01	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.550326	NA	NA	NA	NA	NA	0.116	NA	3.9016
1262	19	55711543	55711543	G	A	intronic	PTPRH	NA	NA	NA	intronic	ENSG00000080031	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs17700265	0.06	0.06	0.057	0.0617013	0.0984	0.0268	0.0447	0.059	0.0757	0.1	0.01	0.04	0.05	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.800896	NA	NA	NA	NA	NA	0.101	NA	3.9016
1262	14	24545375	24545375	C	T	exonic	CPNE6	NA	synonymous SNV	CPNE6:NM_006032:exon11:c.C942T:p.T314T	exonic	ENSG00000100884	NA	synonymous SNV	ENSG00000100884:ENST00000216775:exon11:c.C942T:p.T314T,ENSG00000100884:ENST00000397016:exon12:c.C942T:p.T314T,ENSG00000100884:ENST00000537691:exon12:c.C1107T:p.T369T	NA	NA	14q11.2	NA	NA	NA	NA	rs2070341	0.47	0.47	0.462	0.39377	0.6193	0.5337	0.4625	0.0787	0.3947	0.63	0.55	0.5	0.1	0.529	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.86106	NA	NA	0.616977	0.170222	NA	0.449	NA	3.9013896
1262	12	124102871	124102871	T	C	intronic	DDX55	NA	NA	NA	UTR5	ENSG00000111364	ENST00000421670:c.-360T>C	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs68163141	0.23	0.23	0.215	0.252396	0.2654	0.0159	0.2205	0.447	0.2423	0.26	0.02	0.21	0.46	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.424489	NA	NA	NA	NA	NA	0.188	NA	3.9012667
1262	4	70146080	70146080	T	C	upstream	UGT2B28	NA	NA	NA	upstream	ENSG00000135226	NA	NA	NA	NA	NA	4q13.2	NA	NA	Name=4	NA	rs13124875	0.67	0.67	0.671	0.640375	0.7654	0.5962	0.67	0.5877	0.6074	0.79	0.58	0.7	0.59	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.867132	NA	NA	NA	NA	NA	0.623	NA	3.9012666
1262	7	4795042	4795042	G	A	intronic	FOXK1	NA	NA	NA	intronic	ENSG00000164916	NA	NA	NA	NA	NA	7p22.1	NA	NA	NA	NA	rs77087728	0.02	0.02	0.013	0.0103834	0.0338	NA	0.0115	0.0023	0.0072	0.04	NA	0.01	0.0041	0.0255	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.826427	NA	NA	0.039544	0.00749	NA	0.007	NA	3.901156
1262	3	164710040	164710040	G	A	intronic	SI	NA	NA	NA	intronic	ENSG00000090402	NA	NA	NA	NA	NA	3q26.1	NA	NA	NA	NA	rs1079879	0.02	0.02	0.012	0.0171725	0.0378	NA	0.0259	0.0008	0.0297	0.03	NA	0.03	NA	0.0258	0.036	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.688592	NA	NA	0.035581	0.007944	NA	0.007	NA	3.900819
1262	1	163307754	163307754	A	G	intronic	NUF2	NA	NA	NA	intronic	ENSG00000143228	NA	NA	NA	NA	NA	1q23.3	NA	NA	NA	NA	rs4657262	0.02	0.02	0.011	0.0147764	0.0487	0.001	0.0159	0.0023	0.0102	0.04	0.0017	0.01	0.002	NA	0.051	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.619101	NA	NA	0.050629	0.011561	NA	0.007	NA	3.900671
1262	2	143692388	143692388	T	C	intronic	KYNU	NA	NA	NA	intronic	ENSG00000115919	NA	NA	NA	NA	NA	2q22.2	NA	NA	NA	NA	rs76614188	0.14	0.14	0.121	0.150559	0.0994	0.3175	0.0908	0.0719	0.18	0.1	0.29	0.09	0.05	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.273512	NA	NA	NA	NA	NA	0.065	NA	3.9006
1262	3	52854140	52854140	T	G	intronic	ITIH4	NA	NA	NA	intronic	ENSG00000055955,ENSG00000243696	NA	NA	NA	NA	NA	3p21.1	NA	NA	NA	NA	rs9831977	0.08	0.08	0.069	0.0700879	0.0994	0.0417	0.1167	0.0605	0.0491	0.1	0.04	0.14	0.06	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.925144	1.925144	NA	NA	NA	NA	0.145	NA	3.9006
1262	6	30138645	30138645	G	A	intronic	TRIM15	NA	NA	NA	intronic	ENSG00000204610	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs1029238	0.13	0.13	0.125	0.138578	0.0994	0.1885	0.1023	0.1634	0.1196	0.1	0.2	0.1	0.12	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.928365	NA	NA	NA	NA	NA	0.058	NA	3.9006
1262	7	5254447	5254447	C	T	intronic	WIPI2	NA	NA	NA	intronic	ENSG00000157954	NA	NA	NA	NA	NA	7p22.1	NA	NA	NA	NA	rs28607283	0.06	0.06	0.057	0.0497204	0.0994	0.002	0.0965	0.0242	0.0491	0.09	0.0017	0.1	0.04	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.6534	NA	NA	NA	NA	NA	0.036	NA	3.9006
1262	12	88379520	88379520	T	A	intronic	C12orf50	NA	NA	NA	intronic	ENSG00000165805	NA	NA	NA	NA	NA	12q21.32	NA	NA	NA	NA	rs11104702	0.24	0.24	0.27	0.302516	0.0994	0.0565	0.1383	0.8132	0.1912	0.09	0.04	0.13	0.78	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.655518	NA	NA	NA	NA	NA	0.312	NA	3.9006
1262	19	4697757	4697757	C	G	intronic	DPP9	NA	NA	NA	intronic	ENSG00000142002	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs7254243	0.1	0.1	0.09	0.112021	0.0994	0.0595	0.0663	0.1838	0.1145	0.1	0.07	0.06	0.15	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.234147	NA	NA	NA	NA	NA	0.109	NA	3.9006
1262	19	41596587	41596587	T	C	intronic	CYP2A13	NA	NA	NA	intronic	ENSG00000197838	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs8192786	0.13	0.13	0.09	0.144968	0.0994	0.0734	0.2507	0.2194	0.09	0.1	0.07	0.18	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.126441	NA	NA	NA	NA	NA	0.087	NA	3.9006
1262	11	4928866	4928866	C	T	exonic	OR51A7	NA	synonymous SNV	OR51A7:NM_001004749:exon1:c.C267T:p.A89A	exonic	ENSG00000176895	NA	synonymous SNV	ENSG00000176895:ENST00000359350:exon1:c.C267T:p.A89A	NA	NA	11p15.4	NA	NA	NA	NA	rs7941509	0.36	0.36	0.342	0.398363	0.6143	0.0804	0.3919	0.2625	0.6922	0.61	0.08	0.46	0.24	0.5351	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.527405	NA	NA	0.616799	0.302817	ID=COSM1561380;OCCURENCE=1(large_intestine)	0.384	NA	3.9004676
1262	12	109637372	109637372	G	C	intronic	ACACB	NA	NA	NA	intronic	ENSG00000076555	NA	NA	NA	NA	NA	12q24.11	NA	NA	NA	NA	rs73191140	0.02	0.02	0.012	0.0129792	0.0408	NA	0.0115	NA	0.0164	0.04	NA	0.02	NA	0.0275	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.166288	NA	NA	0.031395	0.008398	NA	0.094	NA	3.900305
1262	22	32587348	32587348	A	G	intronic	RFPL2	NA	NA	NA	intronic	ENSG00000128253	NA	NA	NA	NA	NA	22q12.3	NA	NA	NA	NA	rs9621401	0.04	0.04	0.029	0.0493211	0.0378	0.0099	0.0216	0.1233	0.0215	0.03	0.01	0.02	0.09	0.0343	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.72309	NA	NA	0.028023	0.113936	NA	0.072	NA	3.899877
1262	22	36695123	36695123	G	C	intronic	MYH9	NA	NA	NA	intronic	ENSG00000100345	NA	NA	NA	NA	NA	22q12.3	NA	NA	NA	NA	rs16996650	0.05	0.05	0.03	0.052516	0.0328	0.1131	0.0245	0.0151	0.0808	0.04	0.1	0.03	0.01	0.0392	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.139508	NA	NA	0.028256	0.021788	NA	0.043	NA	3.899744
1262	2	26667273	26667273	C	T	intronic	DRC1	NA	NA	NA	intronic	ENSG00000157856	NA	NA	NA	NA	NA	2p23.3	NA	NA	NA	NA	rs116115107	0.02	0.02	0.017	0.0139776	0.0388	NA	0.0144	NA	0.0215	0.04	NA	0.02	NA	0.0243	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.086788	NA	NA	0.037209	0.00749	NA	0.087	NA	3.899691
1262	1	149880650	149880650	C	T	intronic	SV2A	NA	NA	NA	intronic	ENSG00000159164	NA	NA	NA	NA	NA	1q21.2	NA	NA	NA	NA	rs35002905	0.09	0.09	0.085	0.0948482	0.1004	0.1379	0.049	0.0023	0.2025	0.1	0.16	0.07	0.002	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.005621	NA	NA	NA	NA	NA	0.116	NA	3.8996
1262	4	147215026	147215026	C	T	intronic	SLC10A7	NA	NA	NA	intronic	ENSG00000120519	NA	NA	NA	NA	NA	4q31.22	NA	NA	NA	NA	rs10032088	0.1	0.1	0.085	0.10603	0.1004	0.0843	0.0879	0.1225	0.1247	0.1	0.09	0.11	0.1	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.824939	NA	NA	NA	NA	NA	0.116	NA	3.8996
1262	19	49401205	49401205	C	T	intronic	TULP2	NA	NA	NA	intronic	ENSG00000104804	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs17847559	NA	NA	NA	0.0926518	0.1004	0.1171	0.0749	0.0303	0.1564	NA	NA	NA	NA	NA	0.065	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.959376	NA	NA	NA	NA	NA	0.043	NA	3.8996
1262	11	124947476	124947476	T	C	intronic	SLC37A2	NA	NA	NA	intronic	ENSG00000134955	NA	NA	NA	NA	NA	11q24.2	NA	NA	NA	NA	rs77657184	0.02	0.02	0.029	0.0157748	0.0388	0.001	0.0303	0.0113	0.0031	0.04	0.0017	0.03	0.01	0.0257	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.887267	2.887267	NA	0.035946	0.012057	NA	0.087	NA	3.899554
1262	16	4936095	4936095	A	C	intronic	PPL	NA	NA	NA	intronic	ENSG00000118898	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs117094803	0.02	0.02	0.017	0.0133786	0.0388	NA	0.0202	0.0023	0.0112	0.05	NA	0.02	0.01	0.0289	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.172037	NA	NA	0.032915	0.006148	NA	0.058	NA	3.899385
1262	4	175413296	175413296	C	T	intronic	HPGD	NA	NA	NA	intronic	ENSG00000164120	NA	NA	NA	NA	NA	4q34.1	NA	NA	NA	NA	rs17060532	0.02	0.02	0.021	0.0119808	0.0328	NA	0.0216	0.0045	0.0061	0.04	NA	0.02	0.0041	0.0286	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.472868	NA	NA	0.039581	0.010223	NA	NA	NA	3.899019
1262	5	142500753	142500753	G	A	intronic	ARHGAP26	NA	NA	NA	intronic	ENSG00000145819	NA	NA	NA	NA	NA	5q31.3	NA	NA	NA	NA	rs41290619	0.02	0.02	0.015	0.0105831	0.0427	NA	0.0086	0.0015	0.002	0.05	NA	0.02	NA	0.0259	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.208977	NA	NA	0.032674	0.006809	NA	0.007	NA	3.898726
1262	2	135710322	135710322	A	G	intronic	CCNT2	NA	NA	NA	exonic	ENSG00000082258	NA	unknown	UNKNOWN	NA	NA	2q21.3	NA	NA	Name=14	NA	rs10166142	0.69	0.69	0.698	0.702875	0.5457	0.877	0.6225	0.6641	0.7945	0.53	0.9	0.64	0.72	0.587	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.301931	NA	NA	0.46859	0.636859	NA	0.558	NA	3.89871
1262	4	6066556	6066556	G	T	intronic	JAKMIP1	NA	NA	NA	intronic	ENSG00000152969	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs150343884	0.02	0.02	0.011	0.0127796	0.0328	NA	0.0144	0.0015	0.0194	0.03	NA	0.02	0.0041	0.0276	0.041	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.925503	NA	NA	0.04093	0.007717	NA	0.007	NA	3.89867
1262	1	20964270	20964270	C	G	intronic	PINK1	NA	NA	NA	intronic	ENSG00000158828	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs2298297	0.15	0.15	NA	0.130391	0.1014	0.1835	0.1816	0.0877	0.1268	0.14	0.18	0.16	0.12	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.418588	NA	NA	NA	NA	NA	0.138	NA	3.8986
1262	1	179363275	179363275	C	A	intronic	AXDND1	NA	NA	NA	intronic	ENSG00000162779	NA	NA	NA	NA	NA	1q25.2	NA	NA	NA	NA	rs16854064	0.11	0.11	0.104	0.096845	0.1014	0.1022	0.0634	0.1619	0.0225	0.11	0.08	0.07	0.17	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.367986	NA	NA	NA	NA	NA	0.138	NA	3.8986
1262	2	115038733	115038733	C	T	intergenic	LOC440900,DPP10	dist=273846;dist=161166	NA	NA	ncRNA_exonic	ENSG00000238520	NA	NA	NA	NA	NA	2q14.1	NA	NA	NA	NA	rs72839147	0.12	0.12	0.097	0.10603	0.1014	0.0744	0.2161	0.1089	0.0613	0.12	0.08	0.2	0.1	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.394791	NA	NA	NA	NA	NA	0.08	NA	3.8986
1262	7	159025494	159025494	C	T	intergenic	VIPR2,NONE	dist=87845;dist=NONE	NA	NA	ncRNA_intronic	ENSG00000229435	NA	NA	NA	NA	NA	7q36.3	NA	NA	NA	NA	rs35096191	0.12	0.12	0.114	0.128994	0.1014	0.2004	0.1138	0.0545	0.1953	0.1	0.2	0.1	0.05	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.758221	NA	NA	NA	NA	NA	0.08	NA	3.8986
1262	11	10503451	10503451	G	A	intronic	AMPD3	NA	NA	NA	intronic	ENSG00000133805	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs73409956	0.1	0.1	0.102	0.102436	0.1014	0.003	0.0807	0.2186	0.0644	0.1	NA	0.09	0.23	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.069694	NA	NA	NA	NA	NA	0.08	NA	3.8986
1262	14	78217597	78217597	G	A	intronic	SNW1	NA	NA	NA	intronic	ENSG00000100603,ENSG00000119705	NA	NA	NA	NA	NA	14q24.3	NA	NA	NA	NA	rs61990684	0.1	0.1	0.091	0.0986422	0.1014	0.006	0.0692	0.2156	0.0542	0.1	NA	0.08	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.367977	NA	NA	NA	NA	NA	0.094	NA	3.8986
1262	20	34312713	34312713	C	T	intronic	RBM39	NA	NA	NA	intronic	ENSG00000131051	NA	NA	NA	NA	NA	20q11.22	NA	NA	NA	NA	rs11699044	0.14	0.14	0.136	0.163738	0.1014	0.1319	0.1383	0.2587	0.1503	0.1	0.12	0.16	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.573338	NA	NA	NA	NA	NA	0.123	NA	3.8986
1262	8	59508076	59508076	A	G	intronic	NSMAF	NA	NA	NA	intronic	ENSG00000035681	NA	NA	NA	NA	NA	8q12.1	NA	NA	Name=41	NA	rs16923588	0.49	0.49	0.503	0.502995	0.3837	0.6131	0.2853	0.6891	0.4151	0.37	0.59	0.33	0.69	0.3823	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.596928	NA	NA	0.335581	0.647526	NA	0.399	NA	3.898419
1262	3	50289635	50289635	C	T	intronic	GNAI2	NA	NA	NA	intronic	ENSG00000114353	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs12721536	0.03	0.03	0.025	0.0209665	0.0547	NA	0.0331	0.0038	0.0225	0.06	NA	0.04	0.01	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.150732	NA	NA	0.04714	0.007948	NA	0.014	NA	3.89816
1262	21	32499501	32499501	G	T	intronic	TIAM1	NA	NA	NA	intronic	ENSG00000156299	NA	NA	NA	NA	NA	21q22.11	NA	NA	NA	NA	rs11700768	0.02	0.02	0.008	0.0183706	0.0408	0.002	0.0202	NA	0.0358	0.04	0.0017	0.01	NA	0.0299	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.363898	NA	NA	0.031163	0.005901	NA	0.014	NA	3.898137
1262	14	24791798	24791798	G	A	intronic	ADCY4	NA	NA	NA	UTR3	ENSG00000129467	ENST00000557056:c.*1734C>T	NA	NA	NA	NA	14q12	NA	NA	NA	NA	rs45442399	0.09	0.09	0.081	0.0914537	0.1113	0.1081	0.0548	0.0477	0.1391	0.1	0.09	0.08	0.06	0.0837	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.02636	NA	NA	0.073605	0.049705	ID=COSN164647;OCCURENCE=1(breast)	0.058	NA	3.8980617
1262	21	37431265	37431265	G	T	UTR5	SETD4	NM_001007259:c.-79C>A	NA	NA	UTR5	ENSG00000185917	ENST00000399212:c.-1583C>A,ENST00000399215:c.-79C>A,ENST00000399208:c.-79C>A,ENST00000399205:c.-1583C>A,ENST00000424303:c.-79C>A,ENST00000443703:c.-79C>A	NA	NA	NA	NA	21q22.12	NA	NA	NA	NA	rs2051395	0.4	0.4	0.382	0.41274	0.4354	0.3393	0.451	0.3956	0.4611	0.44	0.3	0.46	0.42	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.358587	NA	NA	NA	NA	NA	0.37	NA	3.8979334
1262	14	24428929	24428929	C	T	intronic	DHRS4	NA	NA	NA	ncRNA_intronic	ENSG00000215256	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs10151581	0.55	0.55	0.521	0.60643	0.4354	0.6925	0.6354	0.7163	0.5245	0.37	0.68	0.54	0.67	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.885697	NA	NA	NA	NA	NA	NA	NA	3.8979333
1262	19	19244033	19244033	C	T	intronic	TMEM161A	NA	NA	NA	UTR5;UTR3	ENSG00000064545;ENSG00000064545	ENST00000592147:c.-478G>A;ENST00000590216:c.*67G>A	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs72993497	0.08	0.08	0.08	0.0732827	0.0934	NA	0.0879	0.121	0.0532	0.1	NA	0.1	0.12	0.0848	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.049037	NA	NA	0.090698	0.117794	NA	0.174	NA	3.8977687
1262	10	8662175	8662175	G	A	intergenic	GATA3,NONE	dist=545011;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000236420	NA	NA	NA	NA	NA	10p14	NA	NA	NA	NA	rs72777040	0.11	0.11	0.097	0.113019	0.1024	0.1409	0.0749	0.0961	0.1452	0.11	0.13	0.07	0.1	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.219533	NA	NA	NA	NA	NA	0.138	NA	3.8976
1262	1	200968879	200968879	G	A	intronic	KIF21B	NA	NA	NA	intronic	ENSG00000116852	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs16847508	0.17	0.17	0.174	0.178315	0.1024	0.1002	0.085	0.4402	0.0491	0.1	0.1	0.09	0.4	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.042144	NA	NA	NA	NA	NA	0.174	NA	3.8976
1262	2	128610747	128610747	G	A	intronic	POLR2D	NA	NA	NA	intronic	ENSG00000144231	NA	NA	NA	NA	NA	2q14.3	NA	NA	NA	NA	rs10171898	0.12	0.12	0.131	0.123602	0.1024	0.0466	0.0735	0.2859	0.0409	0.1	0.02	0.07	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.066165	NA	NA	NA	NA	NA	0.203	NA	3.8976
1262	3	197431649	197431649	C	T	intronic	KIAA0226	NA	NA	NA	intronic	ENSG00000145016	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs78086828	0.1	0.1	0.11	0.103435	0.1024	0.0308	0.0548	0.1891	0.0982	0.1	0.04	0.06	0.19	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.027625	2.027625	NA	NA	NA	NA	0.174	NA	3.8976
1262	3	197432124	197432124	T	C	intronic	KIAA0226	NA	NA	NA	intronic	ENSG00000145016	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs78872082	0.1	0.1	0.117	0.103634	0.1024	0.0308	0.0548	0.1899	0.0982	0.1	0.04	0.06	0.19	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.094217	NA	NA	NA	NA	NA	0.181	NA	3.8976
1262	6	132014885	132014885	G	T	intronic	ENPP3	NA	NA	NA	intronic	ENSG00000154269	NA	NA	NA	NA	NA	6q23.2	NA	NA	NA	NA	rs3213694	0.28	0.28	0.283	0.29972	0.1024	0.3234	0.2291	0.5182	0.2331	0.09	0.36	0.19	0.52	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.312793	NA	NA	NA	NA	NA	0.37	NA	3.8976
1262	8	41805173	41805173	A	C	intronic	KAT6A	NA	NA	NA	intronic	ENSG00000083168	NA	NA	NA	NA	NA	8p11.21	NA	NA	NA	NA	rs56131485	0.11	0.11	0.082	0.0986422	0.1024	0.1954	0.0735	0.0061	0.138	0.11	0.22	0.06	0.0041	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.445472	NA	NA	NA	NA	NA	0.188	NA	3.8976
1262	11	10503440	10503440	G	A	intronic	AMPD3	NA	NA	NA	intronic	ENSG00000133805	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs79076848	0.12	0.12	0.13	0.130591	0.1024	0.003	0.0879	0.3207	0.0644	0.1	NA	0.1	0.3	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.050926	NA	NA	NA	NA	NA	0.13	NA	3.8976
1262	12	6748035	6748035	C	T	intronic	ACRBP	NA	NA	NA	intronic	ENSG00000111644	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs12826388	0.05	0.05	0.038	0.0427316	0.1024	NA	0.0562	0.0091	0.0613	0.1	NA	0.06	0.01	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.309932	NA	NA	NA	NA	NA	0.014	NA	3.8976
1262	12	133313337	133313337	G	A	intronic	ANKLE2	NA	NA	NA	intronic	ENSG00000176915	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs10870504	0.24	0.24	0.216	0.208866	0.1024	0.4921	0.2133	0.1142	0.1513	0.11	0.5	0.22	0.13	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.033435	NA	NA	NA	NA	NA	0.167	NA	3.8976
1262	14	39594378	39594378	T	G	intronic	GEMIN2	NA	NA	NA	intronic	ENSG00000092208	NA	NA	NA	NA	NA	14q21.1	NA	NA	NA	NA	rs10131369	0.15	0.15	0.135	0.124601	0.1024	0.3145	0.0591	0.059	0.0869	0.11	0.34	0.07	0.04	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.727868	2.727868	NA	NA	NA	NA	0.043	NA	3.8976
1262	12	70928745	70928745	G	A	intronic	PTPRB	NA	NA	NA	ncRNA_intronic	ENSG00000258168	NA	NA	NA	NA	NA	12q15	NA	NA	NA	NA	rs3752702	0.1	0.1	0.085	0.105032	0.17	0.0486	0.1239	0.003	0.2209	0.18	0.05	0.14	0.01	0.1334	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.0595	NA	NA	0.13251	0.026842	NA	0.029	NA	3.8974233
1262	X	107402684	107402684	G	A	intronic	COL4A6	NA	NA	NA	intronic	ENSG00000197565	NA	NA	NA	NA	NA	Xq22.3	NA	NA	NA	NA	rs73251797	0.07	0.07	0.07075	NA	NA	NA	NA	NA	NA	0.06	0.1	0.04	0.06	0.0529	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.218701	NA	NA	0.049792	0.059713	NA	0.101	NA	3.897308
1262	13	73309067	73309067	A	G	intronic	BORA	NA	NA	NA	intronic	ENSG00000136122	NA	NA	NA	NA	NA	13q22.1	NA	NA	NA	NA	rs78285044	0.02	0.02	0.021	0.0141773	0.0447	NA	0.0317	0.0015	0.002	0.05	0.0017	0.03	0.002	0.0229	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.190508	NA	NA	0.035248	0.007821	NA	0.029	NA	3.897152
1262	8	39142264	39142264	A	G	intronic	ADAM32	NA	NA	NA	intronic	ENSG00000197140	NA	NA	NA	NA	NA	8p11.22	NA	NA	Name=4	NA	rs7008808	0.31	0.31	0.324	0.33726	0.3738	0.1319	0.2882	0.4947	0.3333	0.37	0.12	0.32	0.46	0.3467	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.182148	NA	NA	0.382553	0.445407	NA	0.471	NA	3.896947
1262	3	156413633	156413633	G	C	intronic	TIPARP	NA	NA	NA	intronic	ENSG00000163659	NA	NA	NA	NA	NA	3q25.31	NA	NA	NA	NA	rs112709851	0.05	0.05	NA	NA	NA	NA	NA	NA	NA	0.08	NA	0.08	0.02	0.0271	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.001397	NA	NA	0.076044	0.026688	NA	0.007	NA	3.896856
1262	16	70172773	70172773	G	A	intronic	PDPR	NA	NA	NA	intronic	ENSG00000090857	NA	NA	NA	NA	NA	16q22.1	NA	NA	NA	NA	rs114934918	0.07	0.07	0.064	NA	NA	NA	NA	NA	NA	0.12	0.05	0.08	0.01	0.1032	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.46259	NA	NA	NA	NA	NA	0.043	NA	3.8968
1262	1	64095042	64095042	G	T	intronic	PGM1	NA	NA	NA	intronic	ENSG00000079739	NA	NA	NA	NA	NA	1p31.3	NA	NA	NA	NA	rs855313	0.1	0.1	0.102	0.0904553	0.1034	0.0069	0.0965	0.1702	0.0511	0.11	0.01	0.11	0.18	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.948817	NA	NA	NA	NA	NA	0.181	NA	3.8966
1262	3	11951167	11951167	C	T	intergenic	TAMM41,SYN2	dist=62815;dist=94695	NA	NA	ncRNA_exonic	ENSG00000251038	NA	NA	NA	NA	NA	3p25.2	NA	NA	NA	NA	rs62246118	0.05	0.05	0.038	0.0453275	0.1034	0.001	0.0576	0.0023	0.0808	0.1	NA	0.07	0.002	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.64731	NA	NA	NA	NA	NA	0.051	NA	3.8966
1262	7	141954822	141954822	G	A	intronic	PRSS58	NA	NA	NA	intronic	ENSG00000258223	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs1894316	0.18	0.18	0.182	0.198882	0.1034	0.1419	0.2565	0.3328	0.1339	0.09	0.14	0.26	0.31	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.439038	NA	NA	NA	NA	NA	0.261	NA	3.8966
1262	8	17412333	17412333	G	A	intronic	SLC7A2	NA	NA	NA	intronic	ENSG00000003989	NA	NA	NA	NA	NA	8p22	NA	NA	NA	NA	rs2301539	0.19	0.19	0.184	0.206669	0.1034	0.3214	0.1398	0.1982	0.2536	0.11	0.32	0.12	0.24	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.683249	NA	NA	NA	NA	NA	0.138	NA	3.8966
1262	13	51969383	51969383	A	G	intronic	INTS6	NA	NA	NA	intronic	ENSG00000102786	NA	NA	NA	NA	NA	13q14.3	NA	NA	NA	NA	rs2277443	0.06	0.06	0.054	0.0880591	0.1034	0.0734	0.0648	0.003	0.2188	0.1	0.06	0.07	0.0041	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.772232	2.772232	NA	NA	NA	NA	0.058	NA	3.8966
1262	14	28734303	28734303	A	C	intergenic	LINC00645,FOXG1	dist=625461;dist=501975	NA	NA	ncRNA_exonic	ENSG00000197358	NA	NA	NA	NA	NA	14q12	NA	NA	NA	NA	rs12147374	0.06	0.06	0.044	0.076278	0.1034	0.0159	0.0677	0.0522	0.1493	0.1	0.01	0.08	0.05	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.251852	2.251852	NA	NA	NA	NA	0.022	NA	3.8966
1262	8	67925380	67925380	G	A	intronic	PPP1R42	NA	NA	NA	intronic	ENSG00000178125	NA	NA	NA	NA	NA	8q13.1	NA	NA	NA	NA	rs78625536	0.02	0.02	0.013	0.014377	0.0398	NA	0.0403	0.003	NA	0.03	NA	0.03	0.002	0.0268	0.037	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.265106	1.265106	NA	0.036977	0.00749	NA	0.007	NA	3.896423
1262	4	57340592	57340592	C	T	intronic	SRP72	NA	NA	NA	exonic	ENSG00000174780	NA	synonymous SNV	ENSG00000174780:ENST00000504757:exon5:c.C645T:p.N215N	NA	NA	4q12	NA	NA	NA	NA	rs11610	0.39	0.39	0.387	0.402556	0.3121	0.4762	0.4885	0.3979	0.365	0.31	0.46	0.44	0.42	0.3559	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.54976	1.54976	NA	0.269651	0.369269	NA	0.391	NA	3.8956823
1262	3	192873763	192873763	T	C	intergenic	MB21D2,HRASLS	dist=237813;dist=85154	NA	NA	ncRNA_exonic	ENSG00000236229	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs2229371	0.06	0.06	NA	0.0728834	0.1044	0.002	0.0879	0.0378	0.1503	0.1	0.01	0.09	0.05	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.357762	NA	NA	NA	NA	NA	0.094	NA	3.8956
1262	5	112901836	112901836	A	T	intronic	YTHDC2	NA	NA	NA	intronic	ENSG00000047188	NA	NA	NA	NA	NA	5q22.2	NA	NA	NA	NA	rs11747062	0.09	0.09	0.095	0.0884585	0.1044	0.0298	0.036	0.1634	0.0685	0.11	0.04	0.03	0.15	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.235634	NA	NA	NA	NA	NA	0.174	NA	3.8956
1262	10	11355993	11355993	G	A	intronic	CELF2	NA	NA	NA	intronic	ENSG00000048740	NA	NA	NA	NA	NA	10p14	NA	NA	NA	NA	rs11257056	0.14	0.14	0.137	0.150359	0.1044	0.3363	0.0605	0.0159	0.2515	0.11	0.35	0.06	0.02	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3688	NA	NA	NA	NA	NA	0.123	NA	3.8956
1262	16	57113341	57113341	A	G	intronic	NLRC5	NA	NA	NA	intronic	ENSG00000140853	NA	NA	NA	NA	NA	16q13	NA	NA	NA	NA	rs75003587	0.05	0.05	0.041	0.0615016	0.1044	0.0159	0.0461	0.0098	0.1452	0.1	0.02	0.07	0.01	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.363956	NA	NA	NA	NA	NA	0.043	NA	3.8956
1262	17	36934475	36934475	C	T	intronic	PIP4K2B	NA	NA	NA	intronic	ENSG00000141720	NA	NA	NA	NA	NA	17q12	NA	NA	NA	NA	rs7207178	0.15	0.15	0.159	0.171925	0.1044	0.1032	0.0692	0.2731	0.2485	0.11	0.12	0.09	0.27	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.104666	NA	NA	NA	NA	NA	0.13	NA	3.8956
1262	17	57943906	57943906	A	G	intronic	TUBD1	NA	NA	NA	intronic	ENSG00000108423	NA	NA	NA	NA	NA	17q23.1	NA	NA	NA	NA	rs35806089	0.13	0.13	0.12	0.138578	0.1044	0.1171	0.1398	0.236	0.0634	0.1	0.12	0.12	0.18	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.138287	NA	NA	NA	NA	NA	0.167	NA	3.8956
1262	19	22654504	22654504	G	A	intergenic	ZNF98,LOC440518	dist=49356;dist=124555	NA	NA	ncRNA_exonic	ENSG00000269138	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs117922051	0.08	0.08	0.054	0.0932508	0.1044	0.119	0.0764	0.0287	0.1544	0.09	0.09	0.1	0.04	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.934979	NA	NA	NA	NA	NA	0.043	NA	3.8956
1262	19	53848640	53848640	C	T	intronic	ZNF845	NA	NA	NA	intronic	ENSG00000213799	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs73594764	0.12	0.12	0.112	0.128794	0.1044	0.1518	0.0865	0.1505	0.1309	0.11	0.14	0.09	0.16	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.389209	NA	NA	NA	NA	NA	0.167	NA	3.8956
1262	22	24579945	24579945	G	A	intronic	SUSD2	NA	NA	NA	intronic	ENSG00000099994	NA	NA	NA	NA	NA	22q11.23	NA	NA	NA	NA	rs13433653	0.15	0.15	0.156	0.124002	0.1044	0.3085	0.0461	0.0711	0.0808	0.1	0.33	0.05	0.08	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.696267	NA	NA	NA	NA	NA	0.174	NA	3.8956
1262	1	41494222	41494222	G	T	ncRNA_exonic	SLFNL1-AS1	NA	NA	NA	intronic	ENSG00000010803	NA	NA	NA	NA	NA	1p34.2	NA	Name=Pol2,ZNF263	NA	NA	rs11578697	0.44	0.44	0.39	0.423922	0.4682	0.5655	0.572	0.1687	0.4724	0.46	0.56	0.58	0.17	0.4802	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.963832	NA	NA	0.489419	0.230595	NA	0.442	NA	3.8955143
1262	2	162091836	162091836	T	C	intronic	TANK	NA	NA	NA	ncRNA_intronic	ENSG00000235724	NA	NA	NA	NA	NA	2q24.2	Score=1000;Name=V$SRY_01	NA	NA	NA	rs3754970	0.44	0.44	0.448	0.417532	0.4662	0.4157	0.5576	0.2489	0.498	0.49	0.44	0.53	0.3	0.48	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.127509	NA	NA	0.491744	0.302769	NA	0.384	NA	3.8953893
1262	16	23712183	23712183	A	G	intronic	ERN2	NA	NA	NA	UTR3	ENSG00000134398	ENST00000562562:c.*1166T>C	NA	NA	NA	NA	16p12.2	NA	NA	NA	NA	rs26763	0.42	0.42	0.419	0.445088	0.2714	0.497	0.3242	0.6936	0.32	0.27	0.48	0.29	0.64	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.670336	1.670336	NA	NA	NA	NA	0.435	NA	3.8952667
1262	3	29530008	29530008	C	T	intronic	RBMS3	NA	NA	NA	intronic	ENSG00000144642	NA	NA	NA	NA	NA	3p24.1	NA	NA	NA	NA	rs3773022	0.08	0.08	0.091	0.0864617	0.0288	0.0258	0.1167	0.1929	0.0429	0.03	0.03	0.1	0.21	0.0518	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.017569	NA	NA	0.024186	0.164321	NA	0.087	NA	3.895214
1262	15	52420491	52420491	G	T	intronic	GNB5	NA	NA	NA	ncRNA_intronic	ENSG00000259709	NA	NA	NA	NA	NA	15q21.2	NA	NA	NA	NA	rs12909161	0.13	0.13	0.094	0.13139	0.1233	0.1726	0.2608	0.0234	0.1513	0.12	0.16	0.25	0.03	0.1674	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.378405	NA	NA	0.147449	0.052392	NA	0.123	NA	3.8951843
1263	19	8122767	8122767	T	C	exonic	CCL25	NA	synonymous SNV	CCL25:NM_001201359:exon5:c.T405C:p.S135S,CCL25:NM_005624:exon5:c.T408C:p.S136S	exonic	ENSG00000131142	NA	synonymous SNV	ENSG00000131142:ENST00000390669:exon4:c.T408C:p.S136S,ENSG00000131142:ENST00000253451:exon5:c.T405C:p.S135S	NA	NA	19p13.2	NA	Name=USF2,USF-1	NA	NA	rs2303165	0.92	0.92	0.931	0.934704	0.9225	0.8938	0.8516	0.9985	0.9622	0.93	0.88	0.85	1	0.9221	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.294578	NA	NA	0.927408	0.984111	NA	0.87	NA	3.8946586
1263	1	158047657	158047657	G	A	intronic	KIRREL	NA	NA	NA	intronic	ENSG00000183853	NA	NA	NA	NA	NA	1q23.1	NA	NA	NA	NA	rs12133744	0.05	0.05	0.038	0.0393371	0.1054	NA	0.0648	0.0008	0.046	0.1	NA	0.07	NA	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.751935	NA	NA	NA	NA	NA	0.174	NA	3.8946
1263	2	28825607	28825607	G	A	intronic	PLB1	NA	NA	NA	intronic	ENSG00000163803	NA	NA	NA	NA	NA	2p23.2	NA	NA	NA	NA	rs67964454	0.06	0.06	0.04	0.038139	0.1054	NA	0.0634	0.0061	0.0337	0.11	NA	0.09	0.01	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.596388	NA	NA	NA	NA	NA	0.007	NA	3.8946
1263	7	65872345	65872345	T	G	intergenic	LINC00174,LOC493754	dist=6950;dist=146208	NA	NA	ncRNA_intronic	ENSG00000251451	NA	NA	NA	NA	NA	7q11.21	NA	NA	NA	NA	rs778693	0.12	0.12	0.094	0.135383	0.1054	0.1508	0.2104	0.0575	0.2025	0.09	0.18	0.18	0.04	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.860479	NA	NA	NA	NA	NA	0.196	NA	3.8946
1263	10	31917344	31917344	A	C	intergenic	ZEB1,ARHGAP12	dist=98602;dist=176982	NA	NA	downstream	ENSG00000231855	NA	NA	NA	Score=355;Name=lod=37	NA	10p11.22	NA	NA	NA	NA	rs4749689	0.53	0.53	0.52	0.55012	0.6054	0.6617	0.5519	0.2791	0.7434	0.63	0.66	0.51	0.25	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.333287	4.333287	NA	NA	NA	NA	0.42	NA	3.8946
1263	11	55243632	55243632	C	G	intergenic	OR4A15,OR4C15	dist=107238;dist=78151	NA	NA	ncRNA_exonic	ENSG00000255294	NA	NA	NA	NA	NA	11q11	NA	NA	NA	NA	rs1783718	0.07	0.07	0.06	0.0507188	0.1054	0.0476	0.0706	0.0045	0.046	0.1	0.06	0.07	0.01	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.005918	NA	NA	NA	NA	NA	0.101	NA	3.8946
1263	11	69071115	69071115	C	T	intergenic	MYEOV,CCND1	dist=6361;dist=384758	NA	NA	ncRNA_exonic	ENSG00000213275	NA	NA	NA	NA	NA	11q13.3	NA	NA	NA	NA	rs4930677	0.11	0.11	0.122	0.146765	0.1054	0.2401	0.0778	0.0439	0.2812	0.1	0.2	0.09	0.05	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.38028	NA	NA	NA	NA	NA	0.138	NA	3.8946
1263	1	170521650	170521650	T	G	UTR3	GORAB	NM_152281:c.*47T>G	NA	NA	UTR3	ENSG00000120370	ENST00000367763:c.*47T>G,ENST00000498166:c.*1151T>G	NA	NA	NA	NA	1q24.2	NA	NA	NA	NA	rs7552922	0.14	0.14	0.152	0.197085	0.1382	0.119	0.1153	0.2322	0.3487	0.14	0.08	0.12	0.22	0.1597	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.873927	NA	NA	0.141193	0.218207	NA	0.174	NA	3.8942404
1263	6	32088475	32088475	G	A	intronic	ATF6B	NA	NA	NA	intronic	ENSG00000213676	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs144251373	0.02	0.02	0.024	0.0183706	0.0507	0.002	0.0274	0.0008	0.0194	0.04	0.0035	0.02	NA	0.0551	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.786016	NA	0.12	NA	NA	NA	0.007	NA	3.8942
1263	X	2835831	2835831	C	T	intronic	ARSD	NA	NA	NA	intronic	ENSG00000006756	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs75490251	0.07	0.07	0.15739	NA	NA	NA	NA	NA	NA	0.06	0.04	0.07	0.1	0.1058	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.532016	NA	NA	NA	NA	NA	NA	NA	3.8942
1263	13	38357494	38357494	G	A	UTR5	TRPC4	NM_001135958:c.-24C>T,NM_001135957:c.-24C>T,NM_001135956:c.-24C>T,NM_003306:c.-24C>T,NM_001135955:c.-24C>T,NM_016179:c.-24C>T	NA	NA	UTR5	ENSG00000133107	ENST00000379705:c.-24C>T,ENST00000338947:c.-24C>T,ENST00000379681:c.-24C>T,ENST00000426868:c.-24C>T,ENST00000379673:c.-24C>T,ENST00000358477:c.-24C>T,ENST00000355779:c.-24C>T,ENST00000447043:c.-24C>T	NA	NA	NA	NA	13q13.3	NA	NA	NA	NA	rs12583681	0.12	0.12	0.088	0.102636	0.1511	0.0556	0.2061	0.0749	0.0654	0.15	0.04	0.2	0.08	0.1409	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.430493	1.430493	NA	0.147244	0.085565	NA	0.058	NA	3.8940894
1263	6	17849586	17849586	G	C	intronic	KIF13A	NA	NA	NA	intronic	ENSG00000137177	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs56400999	0.02	0.02	0.015	0.00958466	0.0338	NA	0.013	NA	0.0051	0.04	NA	0.02	NA	0.0364	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.353778	NA	NA	0.035836	0.010795	NA	0.022	NA	3.893964
1263	12	3392351	3392351	A	G	UTR3	TSPAN9	NM_001168320:c.*69A>G,NM_006675:c.*69A>G	NA	NA	UTR3	ENSG00000011105	ENST00000537971:c.*69A>G,ENST00000011898:c.*69A>G	NA	NA	NA	NA	12p13.32	NA	NA	NA	NA	rs632887	0.39	0.39	0.406	0.382588	0.4394	0.2014	0.428	0.5038	0.3149	0.42	0.21	0.48	0.49	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.246861	2.246861	NA	NA	NA	NA	0.493	NA	3.8939334
1263	14	24428930	24428930	A	G	intronic	DHRS4	NA	NA	NA	ncRNA_intronic	ENSG00000215256	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs10140455	0.57	0.57	0.549	0.633187	0.4394	0.6925	0.6412	0.8101	0.5266	0.38	0.68	0.55	0.75	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.281048	NA	NA	NA	NA	NA	0.029	NA	3.8939333
1263	4	102014919	102014919	T	G	intronic	PPP3CA	NA	NA	NA	intronic	ENSG00000138814	NA	NA	NA	NA	NA	4q24	NA	NA	NA	NA	rs41275733	0.02	0.02	0.014	0.0217652	0.0368	NA	0.0331	0.0023	0.047	0.03	NA	0.04	0.01	0.0321	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.177409	NA	NA	0.037209	0.006355	NA	0.043	NA	3.893891
1263	1	108307636	108307636	G	C	intronic	VAV3	NA	NA	NA	intronic	ENSG00000134215	NA	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	rs12735293	0.06	0.06	0.045	0.0493211	0.1064	NA	0.0893	0.0061	0.0716	0.11	NA	0.1	0.01	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.546338	NA	NA	NA	NA	NA	0.036	NA	3.8936
1263	3	367825	367825	G	T	intronic	CHL1	NA	NA	NA	intronic	ENSG00000134121	NA	NA	NA	NA	NA	3p26.3	NA	NA	NA	NA	rs13073026	0.05	0.05	0.052	0.0397364	0.1064	0.003	0.0591	0.0121	0.0327	0.1	0.01	0.07	0.01	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.15041	NA	NA	NA	NA	NA	0.036	NA	3.8936
1263	5	161318132	161318132	A	G	intronic	GABRA1	NA	NA	NA	intronic	ENSG00000022355	NA	NA	NA	NA	NA	5q34	NA	NA	NA	NA	rs10051659	0.21	0.21	0.203	0.221645	0.1064	0.2639	0.1037	0.3404	0.2198	0.11	0.28	0.11	0.34	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.697553	NA	NA	NA	NA	NA	0.138	NA	3.8936
1263	5	169445782	169445782	A	G	intronic	DOCK2	NA	NA	NA	intronic	ENSG00000134516	NA	NA	NA	NA	NA	5q35.1	NA	NA	NA	NA	rs17738455	0.14	0.14	0.112	0.128395	0.1064	0.0754	0.2738	0.1309	0.0992	0.11	0.09	0.23	0.16	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.55058	NA	NA	NA	NA	NA	0.109	NA	3.8936
1263	7	65444288	65444288	G	C	intronic	GUSB	NA	NA	NA	intronic	ENSG00000169919	NA	NA	NA	NA	NA	7q11.21	NA	NA	NA	NA	rs906134	0.12	0.12	0.107	0.142173	0.1064	0.1468	0.2133	0.0825	0.2045	0.09	0.18	0.18	0.05	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.357852	NA	NA	NA	NA	NA	0.203	NA	3.8936
1263	8	27657349	27657349	T	C	intronic	ESCO2	NA	NA	NA	intronic	ENSG00000171320	NA	NA	NA	NA	NA	8p21.1	NA	NA	NA	NA	rs72609979	0.19	0.19	0.189	0.199681	0.1064	0.3611	0.0951	0.202	0.2004	0.09	0.36	0.1	0.19	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.097317	NA	NA	NA	NA	NA	0.225	NA	3.8936
1263	12	52961318	52961318	C	T	intronic	KRT74	NA	NA	NA	intronic	ENSG00000170484	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs74095143	0.08	0.08	0.072	0.0770767	0.1064	0.0159	0.0677	0.1256	0.0511	0.1	0.02	0.09	0.11	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.345704	NA	NA	NA	NA	NA	0.072	NA	3.8936
1263	12	127804383	127804383	T	G	intergenic	LOC440117,FLJ37505	dist=445147;dist=561779	NA	NA	ncRNA_exonic	ENSG00000256496	NA	NA	NA	NA	NA	12q24.32	NA	NA	NA	NA	rs2255354	0.11	0.11	0.119	0.110224	0.1064	0.002	0.0793	0.2648	0.0389	0.09	NA	0.1	0.27	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.298399	NA	NA	NA	NA	NA	0.152	NA	3.8936
1263	16	56872722	56872722	C	T	intronic	NUP93	NA	NA	NA	intronic	ENSG00000102900	NA	NA	NA	NA	NA	16q13	NA	NA	NA	NA	rs3764265	0.13	0.13	0.135	0.148163	0.1064	0.1429	0.0821	0.174	0.2086	0.09	0.16	0.1	0.19	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.336034	NA	NA	NA	NA	NA	0.13	NA	3.8936
1263	21	43838403	43838403	T	A	intronic	UBASH3A	NA	NA	NA	intronic	ENSG00000160185	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs9974660	0.23	0.23	0.228	0.210463	0.1064	0.2708	0.1988	0.3654	0.0542	0.12	0.28	0.18	0.37	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.248253	NA	NA	NA	NA	NA	0.261	NA	3.8936
1263	1	16342237	16342237	A	G	exonic	HSPB7	NA	synonymous SNV	HSPB7:NM_014424:exon3:c.T351C:p.T117T	exonic	ENSG00000173641	NA	synonymous SNV	ENSG00000173641:ENST00000311890:exon3:c.T351C:p.T117T,ENSG00000173641:ENST00000406363:exon3:c.T363C:p.T121T,ENSG00000173641:ENST00000411503:exon3:c.T336C:p.T112T,ENSG00000173641:ENST00000463576:exon3:c.T213C:p.T71T,ENSG00000173641:ENST00000487046:exon3:c.T366C:p.T122T,ENSG00000173641:ENST00000375718:exon4:c.T576C:p.T192T	NA	NA	1p36.13	NA	NA	NA	NA	rs1739840	0.64	0.64	0.643	0.652556	0.5944	0.7639	0.4582	0.7216	0.6421	0.58	0.75	0.49	0.71	0.5938	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.50091	NA	NA	0.585136	0.697004	NA	0.674	NA	3.8933306
1263	7	149510936	149510936	C	T	intronic	SSPO	NA	NA	NA	ncRNA_intronic	ENSG00000197558	NA	NA	NA	NA	NA	7q36.1	NA	NA	NA	NA	rs62492760	0.18	0.18	0.156	0.165735	0.1451	0.2421	0.1383	0.2005	0.0808	0.14	0.23	0.13	0.21	0.1505	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.460589	NA	NA	0.144668	0.165381	NA	0.21	NA	3.8930653
1263	22	29414001	29414001	A	G	intronic	ZNRF3	NA	NA	NA	ncRNA_intronic	ENSG00000235786	NA	NA	NA	Score=259;Name=lod=15	NA	22q12.1	NA	NA	NA	NA	rs2347790	0.44	0.44	0.422	0.398163	0.4881	0.4345	0.4899	0.2799	0.363	0.49	0.45	0.48	0.33	0.4555	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.184102	NA	NA	0.496735	0.335616	NA	0.587	NA	3.8929983
1263	3	64145759	64145759	T	C	intronic	PRICKLE2	NA	NA	NA	intronic	ENSG00000163637	NA	NA	NA	NA	NA	3p14.1	NA	NA	NA	NA	rs2306380	0.31	0.31	0.281	0.302316	0.3907	0.2371	0.2104	0.3253	0.3129	0.39	0.21	0.25	0.35	0.3353	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.186583	NA	NA	0.381047	0.31094	NA	0.341	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118059.2;CLNDSDB=.;CLNDSDBID=.	3.892953
1263	2	20402380	20402380	C	G	UTR3	SDC1	NM_002997:c.*147G>C,NM_001006946:c.*147G>C	NA	NA	UTR3	ENSG00000115884	ENST00000254351:c.*147G>C,ENST00000381150:c.*147G>C	NA	NA	NA	NA	2p24.1	NA	NA	NA	NA	rs1131351	0.37	0.37	0.332	0.376997	0.4404	0.4167	0.4121	0.2224	0.455	0.44	0.37	0.4	0.26	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.861099	2.861099	NA	NA	NA	NA	0.413	NA	3.8929334
1263	2	182763586	182763586	G	A	intronic	SSFA2	NA	NA	NA	intronic	ENSG00000138434	NA	NA	NA	NA	NA	2q31.3	NA	NA	NA	NA	rs3731693	0.07	0.07	0.077	0.0846645	0.0348	0.0843	0.0418	0.1241	0.1135	0.03	0.11	0.04	0.12	0.0487	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.053885	NA	NA	0.02361	0.121198	NA	0.065	NA	3.89289
1263	10	27444328	27444328	C	A	UTR5	MASTL	NM_032844:c.-28C>A,NM_001172303:c.-28C>A,NM_001172304:c.-28C>A	NA	NA	UTR5	ENSG00000120539	ENST00000375946:c.-28C>A,ENST00000342386:c.-28C>A,ENST00000375940:c.-28C>A	NA	NA	NA	NA	10p12.1	NA	Name=TBP,IRF1,Nrf1,CCNT2,c-Myc,HEY1,NFKB,c-Jun,HA-E2F1,Sin3Ak-20,Pol2-4H8,RFX5_(N-494),YY1,JunD,TAF7_(SQ-8),YY1_(C-20),BRCA1_(C-1863),E2F6,NRSF,SP1,Pol2,MEF2C_(SC-13268),TCF4,E2F4,GABP,HMGN3,E2F6_(H-50),TAF1	NA	NA	rs7919803	0.5	0.5	0.175	0.505391	0.6024	0.4375	0.5231	0.5265	0.4346	0.58	0.38	0.53	0.5	0.6445	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.637445	1.637445	NA	0.193552	0.116799	NA	NA	NA	3.8928814
1263	9	74840586	74840586	C	A	intronic	GDA	NA	NA	NA	intronic	ENSG00000119125	NA	NA	NA	NA	NA	9q21.13	NA	NA	NA	NA	rs11143178	0.03	0.03	0.022	0.0185703	0.0378	NA	0.0317	0.0234	0.002	0.03	NA	0.05	0.03	0.0264	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.039968	NA	NA	0.043031	0.025933	NA	0.029	NA	3.892769
1263	2	182783994	182783994	C	A	intronic	SSFA2	NA	NA	NA	intronic	ENSG00000138434	NA	NA	NA	NA	NA	2q31.3	NA	NA	NA	NA	rs2288330	0.07	0.07	0.071	0.0844649	0.0348	0.0843	0.0403	0.1241	0.1135	0.03	0.11	0.04	0.12	0.0488	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.239982	NA	NA	0.023721	0.120517	NA	0.051	NA	3.892679
1263	1	149039930	149039930	A	G	intergenic	LOC645166,LOC388692	dist=86876;dist=239546	NA	NA	ncRNA_intronic	ENSG00000203825	NA	NA	NA	NA	NA	1q21.2	NA	NA	NA	NA	rs7545679	0.22	0.22	0.199	0.232827	0.1074	0.4563	0.2305	0.1687	0.2198	0.1	0.46	0.2	0.16	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.123726	NA	NA	NA	NA	NA	0.174	NA	3.8926
1263	2	17948034	17948034	A	G	intronic	GEN1	NA	NA	NA	intronic	ENSG00000163029,ENSG00000178295	NA	NA	NA	NA	NA	2p24.2	NA	NA	NA	NA	rs16983838	0.13	0.13	0.125	0.127396	0.1074	0.0337	0.1153	0.2436	0.0961	0.11	0.03	0.12	0.27	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.691855	NA	NA	NA	NA	NA	0.109	NA	3.8926
1263	4	122258149	122258149	T	G	intronic	QRFPR	NA	NA	NA	intronic	ENSG00000186867	NA	NA	NA	NA	NA	4q27	NA	NA	NA	NA	rs2302308	0.08	0.08	0.063	0.0736821	0.1074	0.1131	0.0648	0.0182	0.0798	0.11	0.09	0.06	0.02	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.376064	NA	NA	NA	NA	NA	0.036	NA	3.8926
1263	6	7414739	7414739	C	T	intronic	RIOK1	NA	NA	NA	intronic	ENSG00000124784	NA	NA	NA	NA	NA	6p24.3	NA	NA	NA	NA	rs2296258	0.17	0.17	0.16	0.151957	0.1074	0.3105	0.2233	0.0484	0.1237	0.09	0.34	0.2	0.06	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.507275	NA	NA	NA	NA	NA	0.13	NA	3.8926
1263	8	9437546	9437546	C	T	intronic	TNKS	NA	NA	NA	intronic	ENSG00000173273	NA	NA	NA	NA	NA	8p23.1	NA	NA	NA	NA	rs62493904	0.14	0.14	0.111	0.144768	0.1074	0.2222	0.268	0.0688	0.1186	0.1	0.19	0.19	0.09	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.08639	NA	NA	NA	NA	NA	0.101	NA	3.8926
1263	9	82478835	82478835	G	A	intergenic	TLE4,TLE1	dist=137179;dist=1719763	NA	NA	ncRNA_exonic	ENSG00000238002	NA	NA	NA	NA	NA	9q21.31	NA	NA	NA	NA	rs7023231	0.16	0.16	0.161	0.161342	0.1074	0.0784	0.0793	0.3812	0.0634	0.11	0.08	0.08	0.37	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.474125	NA	NA	NA	NA	NA	0.145	NA	3.8926
1263	11	81701953	81701953	G	A	intergenic	MIR4300,FAM181B	dist=100075;dist=741093	NA	NA	ncRNA_intronic	ENSG00000245832	NA	NA	NA	NA	NA	11q14.1	NA	NA	NA	NA	rs12577531	0.11	0.11	0.081	0.108027	0.1074	0.251	0.0793	0.0045	0.1217	0.11	0.19	0.08	0.02	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.760089	NA	NA	NA	NA	NA	0.159	NA	3.8926
1263	11	105795065	105795065	T	C	intronic	GRIA4	NA	NA	NA	intronic	ENSG00000152578	NA	NA	NA	NA	NA	11q22.3	NA	NA	NA	NA	rs3758795	0.11	0.11	0.082	0.10603	0.1074	0.1478	0.2421	0.034	0.0624	0.11	0.12	0.22	0.03	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.038129	NA	NA	NA	NA	NA	0.08	NA	3.8926
1263	18	677621	677621	T	G	intronic	ENOSF1	NA	NA	NA	intronic	ENSG00000132199	NA	NA	NA	NA	NA	18p11.32	NA	NA	NA	NA	rs2298582	0.09	0.09	0.093	0.0784744	0.1074	0.0694	0.072	0.056	0.093	0.11	0.06	0.09	0.08	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.702335	NA	NA	NA	NA	NA	0.116	NA	3.8926
1263	19	35126605	35126605	A	G	intergenic	SCGB2B2,SCGB2B3P	dist=41115;dist=10173	NA	NA	ncRNA_exonic	ENSG00000271049	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs733998	0.06	0.06	0.059	0.0798722	0.1074	NA	0.0591	0.0522	0.1861	0.11	NA	0.06	0.06	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.534236	NA	NA	NA	NA	NA	0.072	NA	3.8926
1263	6	91246007	91246007	T	A	intronic	MAP3K7	NA	NA	NA	intronic	ENSG00000135341	NA	NA	NA	NA	NA	6q15	NA	NA	NA	NA	rs9345029	0.03	0.03	0.033	0.0363419	0.0487	0.0407	0.0317	0.0151	0.0511	0.05	0.03	0.02	0.02	0.0297	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.312158	NA	NA	0.029077	0.017703	NA	0.029	NA	3.892523
1263	10	27356071	27356071	T	C	intronic	ANKRD26	NA	NA	NA	intronic	ENSG00000107890	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs115864032	0.02	0.02	0.015	0.024361	0.0388	0.004	0.0274	0.0265	0.0256	0.04	0.0017	0.04	0.01	0.032	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.007122	NA	NA	0.03691	0.030212	NA	0.014	NA	3.89229
1263	1	156352447	156352447	G	T	intronic	RHBG	NA	NA	NA	UTR3	ENSG00000132677	ENST00000537040:c.*378G>T	NA	NA	NA	NA	1q22	NA	NA	NA	NA	rs954916	0.31	0.31	0.284	0.304513	0.2744	0.3522	0.3718	0.2731	0.2812	0.27	0.35	0.4	0.26	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.368376	NA	NA	NA	NA	NA	0.333	NA	3.8922667
1263	12	6690190	6690190	A	C	intronic	CHD4	NA	NA	NA	ncRNA_intronic	ENSG00000247853	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs55670476	0.12	0.12	0.107	0.123802	0.1372	0.004	0.0764	0.2118	0.1483	0.13	0.0017	0.1	0.23	0.1383	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.067198	NA	NA	0.165581	0.194507	NA	0.138	NA	3.8922523
1263	22	22707429	22707429	T	C	intergenic	LOC96610,ZNF280B	dist=30105;dist=131343	NA	NA	intronic	ENSG00000211647	NA	NA	NA	NA	NA	22q11.22	NA	Name=Pol2	NA	NA	rs73153802	0.2	0.2	0.196	0.195887	0.2217	0.2024	0.1585	0.1785	0.2127	0.24	0.2	0.15	0.19	0.3436	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.734579	NA	NA	0.209115	0.184722	NA	0.123	NA	3.8922517
1263	6	123539685	123539685	T	C	UTR3	TRDN	NM_006073:c.*61A>G	NA	NA	UTR3	ENSG00000186439	ENST00000398178:c.*61A>G,ENST00000334268:c.*61A>G	NA	NA	NA	NA	6q22.31	NA	NA	NA	NA	rs1259	0.36	0.36	NA	0.465256	0.4414	0.371	0.5836	0.5855	0.3405	0.33	0.29	0.46	0.41	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.922826	NA	NA	NA	NA	NA	NA	NA	3.8919334
1263	11	130748131	130748131	A	G	UTR3	SNX19	NM_014758:c.*186T>C	NA	NA	UTR3	ENSG00000120451	ENST00000265909:c.*186T>C,ENST00000534726:c.*186T>C,ENST00000545537:c.*186T>C,ENST00000426933:c.*186T>C	NA	NA	NA	NA	11q24.3	NA	NA	NA	NA	rs3190331	0.44	0.44	0.419	0.48123	0.4414	0.4812	0.562	0.3744	0.6094	0.45	0.46	0.52	0.36	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.104766	NA	NA	NA	NA	NA	0.319	NA	3.8919334
1263	19	5843609	5843609	T	C	UTR3	FUT3	NM_001097641:c.*156A>G,NM_001097640:c.*156A>G,NM_001097639:c.*156A>G,NM_000149:c.*156A>G	NA	NA	UTR3	ENSG00000171124	ENST00000458379:c.*156A>G,ENST00000589620:c.*156A>G,ENST00000303225:c.*156A>G,ENST00000589918:c.*156A>G	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs874232	0.5	0.5	0.449	0.526757	0.4414	0.7083	0.5706	0.3654	0.6145	0.44	0.68	0.54	0.36	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.207988	NA	NA	NA	NA	NA	0.116	NA	3.8919334
1263	5	176002144	176002144	A	C	exonic	CDHR2	NA	synonymous SNV	CDHR2:NM_001171976:exon8:c.A555C:p.I185I,CDHR2:NM_017675:exon8:c.A555C:p.I185I	exonic	ENSG00000074276	NA	synonymous SNV	ENSG00000074276:ENST00000506348:exon7:c.A555C:p.I185I,ENSG00000074276:ENST00000261944:exon8:c.A555C:p.I185I,ENSG00000074276:ENST00000510636:exon8:c.A555C:p.I185I	NA	NA	5q35.2	Score=878;Name=V$ZID_01	NA	NA	NA	rs4242200	0.87	0.87	0.848	0.841653	0.9274	0.8403	0.902	0.7504	0.8354	0.93	0.84	0.93	0.76	0.9033	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.317295	NA	NA	0.944186	0.775533	NA	0.783	NA	3.8917806
1263	1	32156940	32156940	C	A	intronic	COL16A1	NA	NA	NA	intronic	ENSG00000084636	NA	NA	NA	NA	NA	1p35.2	NA	NA	NA	NA	rs2297680	0.14	0.14	0.105	0.20008	0.1083	0.1488	0.3545	0.0825	0.3967	0.11	0.17	0.26	0.07	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.602979	NA	NA	NA	NA	NA	0.159	NA	3.8917
1263	1	201030668	201030668	G	A	intronic	CACNA1S	NA	NA	NA	intronic	ENSG00000081248	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs2297904	0.27	0.27	0.271	0.265775	0.1083	0.4335	0.1772	0.3464	0.2086	0.11	0.45	0.18	0.36	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.526289	NA	NA	NA	NA	NA	0.196	NA	3.8917
1263	1	227696002	227696002	A	G	intergenic	CDC42BPA,ZNF678	dist=190176;dist=55218	NA	NA	downstream	ENSG00000235827	NA	NA	NA	Score=840;Name=lod=3452	NA	1q42.13	NA	NA	NA	NA	rs2018828	0.49	0.49	0.426	0.461861	0.6083	0.4127	0.5749	0.3268	0.4642	0.61	0.45	0.55	0.32	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.288429	NA	NA	NA	NA	NA	0.457	NA	3.8917
1263	3	64627448	64627448	C	T	intronic	ADAMTS9	NA	NA	NA	intronic	ENSG00000163638	NA	NA	NA	NA	NA	3p14.1	NA	NA	NA	NA	rs9832057	0.28	0.28	0.263	0.332668	0.1083	0.2659	0.3329	0.6188	0.2454	0.1	0.24	0.28	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.015717	NA	NA	NA	NA	NA	0.261	NA	3.8917
1263	4	3188265	3188265	C	T	intronic	HTT	NA	NA	NA	intronic	ENSG00000197386	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs363093	0.17	0.17	0.186	0.189497	0.1083	0.0089	0.1225	0.4849	0.1074	0.11	0.0035	0.12	0.48	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.295736	NA	NA	NA	NA	NA	0.167	NA	3.8917
1263	5	94903527	94903527	T	C	intronic	ARSK	NA	NA	NA	intronic	ENSG00000164291	NA	NA	NA	NA	NA	5q15	NA	NA	NA	NA	rs73777227	0.13	0.13	0.131	0.138179	0.1083	0.0109	0.1095	0.3185	0.0767	0.11	0.0035	0.14	0.28	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.030321	3.030321	NA	NA	NA	NA	0.239	NA	3.8917
1263	7	139724742	139724742	G	C	intronic	PARP12	NA	NA	NA	intronic	ENSG00000059378	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs3735351	0.06	0.06	0.06	0.047524	0.1083	0.0357	0.0576	0.0204	0.0266	0.1	0.04	0.07	0.02	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.18164	NA	NA	NA	NA	NA	0.036	NA	3.8917
1263	11	68331663	68331663	G	A	intronic	PPP6R3	NA	NA	NA	intronic	ENSG00000110075	NA	NA	NA	NA	NA	11q13.2	NA	NA	NA	NA	rs12804775	0.05	0.05	0.042	0.0459265	0.1083	0.001	0.049	0.0023	0.0849	0.11	0.0017	0.07	0.002	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.848328	NA	NA	NA	NA	NA	0.014	NA	3.8917
1263	11	73106408	73106408	C	T	intronic	RELT	NA	NA	NA	intronic	ENSG00000054967	NA	NA	NA	NA	NA	11q13.4	NA	NA	NA	NA	rs7112924	0.13	0.13	0.139	0.14357	0.1083	0.0099	0.0807	0.3548	0.0767	0.11	0.01	0.07	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.406027	NA	NA	NA	NA	NA	0.232	NA	3.8917
1263	19	33453821	33453821	T	C	intronic	CEP89	NA	NA	NA	intronic	ENSG00000121289	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs55983014	0.14	0.14	0.124	0.161342	0.1083	0.2698	0.1311	0.0764	0.2403	0.09	0.26	0.15	0.08	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.122745	NA	NA	NA	NA	NA	0.138	NA	3.8917
1263	22	43455592	43455592	G	A	intronic	TTLL1	NA	NA	NA	intronic	ENSG00000100271	NA	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs17415203	0.07	0.07	0.066	0.0585064	0.1083	0.0129	0.0663	0.0575	0.0501	0.11	0.01	0.09	0.05	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.598149	NA	NA	NA	NA	NA	0.123	NA	3.8917
1263	3	45132637	45132637	T	C	intronic	CDCP1	NA	NA	NA	intronic	ENSG00000163814	NA	NA	NA	NA	NA	3p21.31	NA	Name=KAP1	NA	NA	rs1879240	0.29	0.29	0.299	0.297524	0.3857	0.2272	0.2983	0.2057	0.4029	0.41	0.19	0.29	0.22	0.3427	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.107475	NA	NA	0.380116	0.231713	NA	0.225	NA	3.891484
1263	15	45669094	45669094	G	A	intronic	GATM	NA	NA	NA	UTR5	ENSG00000171766	ENST00000559885:c.-7474C>T	NA	NA	NA	NA	15q21.1	NA	NA	NA	NA	rs12437887	0.46	0.46	0.426	0.44349	0.2753	0.8065	0.5202	0.3169	0.3589	0.27	0.85	0.46	0.28	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.222342	NA	NA	NA	NA	NA	0.304	NA	3.8913667
1263	1	45220566	45220566	C	A	intronic	KIF2C	NA	NA	NA	intronic	ENSG00000142945	NA	NA	NA	NA	NA	1p34.1	NA	NA	NA	NA	rs76670103	0.03	0.03	0.029	0.0235623	0.0358	NA	0.0519	0.0303	0.0061	0.04	NA	0.06	0.04	0.0304	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.129469	NA	NA	0.042442	0.032031	NA	0.043	NA	3.891358
1263	14	107114009	107114009	T	C	intergenic	LINC00221,NONE	dist=162480;dist=NONE	NA	NA	exonic	ENSG00000223648	NA	nonsynonymous SNV	ENSG00000223648:ENST00000454421:exon2:c.A86G:p.E29G	NA	NA	14q32.33	NA	NA	NA	NA	rs11846079	0.57	0.57	0.522	0.629393	0.3897	0.5337	0.4683	0.9206	0.6953	0.42	0.52	0.54	0.89	0.5524	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-3.21778	NA	1	NA	NA	NA	0.551	NA	3.8912334
1263	10	50943186	50943186	C	T	UTR3	OGDHL	NM_001143997:c.*88G>A,NM_001143996:c.*88G>A,NM_018245:c.*88G>A	NA	NA	UTR3	ENSG00000197444	ENST00000374103:c.*88G>A,ENST00000432695:c.*88G>A,ENST00000419399:c.*88G>A	NA	NA	NA	NA	10q11.23	NA	NA	NA	NA	rs1258256	0.48	0.48	0.391	0.429712	0.4423	0.8839	0.4669	0.0522	0.4325	0.44	0.88	0.51	0.07	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.395001	NA	NA	NA	NA	NA	0.29	NA	3.8910334
1263	1	24408015	24408015	C	G	intronic	MYOM3	NA	NA	NA	ncRNA_intronic	ENSG00000225315,ENSG00000230703	NA	NA	NA	NA	NA	1p36.11	NA	NA	NA	NA	rs10903090	0.4	0.4	0.391	0.366813	0.4423	0.4266	0.3501	0.3654	0.2413	0.45	0.43	0.34	0.35	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.227434	NA	NA	NA	NA	NA	0.348	NA	3.8910333
1263	18	43253100	43253100	C	T	intronic	SLC14A2	NA	NA	NA	ncRNA_intronic	ENSG00000267193	NA	NA	NA	NA	NA	18q12.3	NA	NA	NA	NA	rs1000501	0.46	0.46	0.476	0.472644	0.4423	0.369	0.415	0.5832	0.502	0.45	0.4	0.38	0.59	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.987883	NA	NA	NA	NA	NA	0.37	NA	3.8910333
1263	1	24768469	24768469	G	A	intronic	NIPAL3	NA	NA	NA	intronic	ENSG00000001461	NA	NA	NA	NA	NA	1p36.11	NA	NA	NA	NA	rs11582625	0.11	0.11	0.121	0.119609	0.1093	0.006	0.1081	0.2428	0.089	0.12	0.01	0.11	0.24	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.08204	NA	NA	NA	NA	NA	0.087	NA	3.8907
1263	2	30756265	30756265	G	A	intronic	LCLAT1	NA	NA	NA	intronic	ENSG00000172954	NA	NA	NA	NA	NA	2p23.1	NA	NA	NA	NA	rs829625	0.11	0.11	0.116	0.0950479	0.1093	0.1359	0.0403	0.0961	0.0757	0.12	0.12	0.05	0.14	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.351591	NA	NA	NA	NA	NA	0.181	NA	3.8907
1263	2	87000387	87000387	T	G	intronic	RMND5A	NA	NA	NA	intronic	ENSG00000153561	NA	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs67856656	0.11	0.11	0.118	0.0924521	0.1093	0.0843	0.0562	0.1445	0.0389	0.12	0.08	0.05	0.16	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.537243	NA	NA	NA	NA	NA	0.152	NA	3.8907
1263	7	30701914	30701914	G	A	intronic	CRHR2	NA	NA	NA	intronic	ENSG00000106113	NA	NA	NA	NA	NA	7p14.3	NA	NA	NA	NA	rs4723000	0.15	0.15	0.15	0.180112	0.1093	0.1696	0.1182	0.2458	0.2188	0.09	0.15	0.13	0.24	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.327665	NA	NA	NA	NA	NA	0.246	NA	3.8907
1263	14	65418475	65418475	G	C	intronic	CHURC1-FNTB,RAB15	NA	NA	NA	intronic	ENSG00000125954,ENSG00000139998	NA	NA	NA	NA	NA	14q23.3	NA	NA	NA	NA	rs17752452	0.08	0.08	0.084	0.0565096	0.1093	0.0784	0.072	0.0227	0.0143	0.12	0.09	0.07	0.02	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.655537	NA	NA	NA	NA	NA	0.022	NA	3.8907
1263	17	76471679	76471679	G	A	intronic	DNAH17	NA	NA	NA	intronic	ENSG00000187775	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs999430	0.13	0.13	0.14	0.158347	0.1093	0.1895	0.0965	0.177	0.1953	0.11	0.18	0.1	0.14	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.533038	NA	NA	NA	NA	NA	0.116	NA	3.8907
1263	19	41600800	41600800	C	T	intronic	CYP2A13	NA	NA	NA	intronic	ENSG00000197838	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs1709081	0.2	0.2	0.163	0.23143	0.1093	0.0685	0.2738	0.4743	0.1667	0.11	0.06	0.22	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.962017	NA	NA	NA	NA	NA	0.225	NA	3.8907
1263	19	54722039	54722039	C	T	intronic	LILRB3	NA	NA	NA	intronic	ENSG00000170889,ENSG00000204577,ENSG00000244482	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs112913349	0.13	0.13	0.087	0.142173	0.1093	0.002	0.134	0.3328	0.0685	0.1	0.0035	0.12	0.34	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.994952	NA	NA	NA	NA	NA	0.123	NA	3.8907
1263	19	54722095	54722095	G	A	intronic	LILRB3	NA	NA	NA	intronic	ENSG00000170889,ENSG00000204577,ENSG00000244482	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs112224147	0.13	0.13	0.136	0.145966	0.1093	0.002	0.1311	0.3487	0.0685	0.1	0.0035	0.11	0.36	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.075346	NA	NA	NA	NA	NA	0.101	NA	3.8907
1263	19	56163704	56163704	C	T	intronic	CCDC106	NA	NA	NA	intronic	ENSG00000173581	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs73062531	0.05	0.05	0.065	0.0541134	0.1093	0.0069	0.072	0.0159	0.0849	0.09	0.01	0.08	0.03	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.448316	NA	NA	NA	NA	NA	0.116	NA	3.8907
1263	4	100048509	100048509	T	C	ncRNA_intronic	LOC100507053	NA	NA	NA	ncRNA_intronic	ENSG00000246090	NA	NA	NA	NA	NA	4q23	NA	NA	NA	NA	rs6813415	0.14	0.14	0.133	0.117013	0.2773	NA	0.1729	0.0688	0.0982	0.27	NA	0.19	0.07	0.2103	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.346624	NA	NA	0.288372	0.10985	NA	0.225	NA	3.8906946
1263	11	7817420	7817420	T	A	downstream	OR5P2	NA	NA	NA	ncRNA_intronic	ENSG00000254951,ENSG00000271758	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs7949546	0.27	0.27	0.255	0.236821	0.2763	0.129	0.2911	0.3472	0.1196	0.29	0.15	0.28	0.37	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.542649	NA	NA	NA	NA	NA	0.254	NA	3.8903666
1263	11	7817434	7817434	C	T	downstream	OR5P2	NA	NA	NA	ncRNA_intronic	ENSG00000254951,ENSG00000271758	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs7931990	0.27	0.27	0.27	0.236621	0.2763	0.128	0.2911	0.3472	0.1196	0.29	0.15	0.28	0.37	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.332431	NA	NA	NA	NA	NA	0.254	NA	3.8903666
1263	18	44561795	44561795	C	T	UTR5	TCEB3B	NM_016427:c.-160G>A	NA	NA	UTR5	ENSG00000206181	ENST00000332567:c.-160G>A	NA	NA	NA	NA	18q21.1	NA	NA	NA	NA	rs2571026	0.51	0.51	0.504	0.533746	0.4433	0.6448	0.6225	0.4342	0.5838	0.44	0.63	0.58	0.43	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.048341	NA	NA	NA	NA	NA	0.312	NA	3.8900334
1263	1	12316584	12316584	A	G	intronic	VPS13D	NA	NA	NA	intronic	ENSG00000048707	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs235246	0.07	0.07	0.046	0.08127	0.0209	0.0198	0.1297	0.1536	0.0746	0.03	0.01	0.1	0.16	0.06	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.469169	NA	NA	0.029186	0.14276	NA	0.065	NA	3.889914
1263	1	179054692	179054692	T	G	intronic	TOR3A	NA	NA	NA	UTR5	ENSG00000186283	ENST00000447595:c.-22T>G	NA	NA	NA	NA	1q25.2	NA	NA	Name=3	NA	rs912758	0.69	0.69	0.687	0.684305	0.6332	0.6091	0.5317	0.9259	0.5961	0.65	0.63	0.57	0.91	0.6436	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.612931	NA	NA	NA	NA	NA	0.826	NA	3.8898667
1263	3	64627752	64627752	C	T	intronic	ADAMTS9	NA	NA	NA	intronic	ENSG00000163638	NA	NA	NA	NA	NA	3p14.1	NA	NA	NA	NA	rs7632802	0.27	0.27	0.252	0.319289	0.1103	0.2827	0.3343	0.553	0.2454	0.1	0.26	0.28	0.53	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.731958	NA	NA	NA	NA	NA	0.261	NA	3.8897
1263	5	7899909	7899909	G	C	intronic	MTRR	NA	NA	NA	intronic	ENSG00000124275	NA	NA	NA	NA	NA	5p15.31	NA	NA	NA	NA	rs10520874	0.2	0.2	0.194	0.225439	0.1103	0.1677	0.3242	0.3676	0.1411	0.1	0.18	0.27	0.32	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.03139	NA	NA	NA	NA	NA	0.29	NA	3.8897
1263	10	48416258	48416258	C	T	intronic	GDF2	NA	NA	NA	intronic	ENSG00000128802	NA	NA	NA	NA	NA	10q11.22	NA	NA	NA	NA	rs3781226	0.09	0.09	0.081	0.0844649	0.1103	0.1538	0.0504	0.0076	0.1145	0.11	0.16	0.06	0.02	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.153007	NA	NA	NA	NA	NA	0.08	NA	3.8897
1263	10	106924208	106924208	A	G	intronic	SORCS3	NA	NA	NA	intronic	ENSG00000156395	NA	NA	NA	NA	NA	10q25.1	NA	NA	NA	NA	rs12249990	0.06	0.06	0.07	0.0632987	0.1103	0.0278	0.0605	0.0378	0.0879	0.1	0.01	0.07	0.04	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.01711	NA	NA	NA	NA	NA	0.08	NA	3.8897
1263	12	101779280	101779280	T	C	intronic	UTP20	NA	NA	NA	intronic	ENSG00000120800	NA	NA	NA	NA	NA	12q23.2	NA	NA	NA	NA	rs117760932	0.05	0.05	0.046	0.0405351	0.1103	0.003	0.049	0.0038	0.0511	0.11	0.0035	0.06	0.01	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.422585	NA	NA	NA	NA	NA	0.022	NA	3.8897
1263	17	45095080	45095080	T	G	intergenic	RPRML,CDC27	dist=38466;dist=100231	NA	NA	ncRNA_exonic	ENSG00000263142	NA	NA	NA	NA	NA	17q21.32	NA	NA	NA	NA	rs2941962	0.09	0.09	0.1	0.129593	0.1103	0.1429	0.1326	0.0552	0.2342	0.08	0.13	0.09	0.06	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.192791	NA	NA	NA	NA	NA	NA	NA	3.8897
1263	17	45137192	45137192	G	A	intergenic	RPRML,CDC27	dist=80578;dist=58119	NA	NA	ncRNA_intronic	ENSG00000262879	NA	NA	NA	NA	NA	17q21.32	NA	NA	NA	NA	rs11649831	0.11	0.11	0.092	0.129393	0.1103	0.1429	0.1311	0.0552	0.2342	0.11	0.15	0.12	0.07	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.448188	NA	NA	NA	NA	NA	0.08	NA	3.8897
1263	19	579713	579713	C	T	intronic	BSG	NA	NA	NA	intronic	ENSG00000172270	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs12609013	0.15	0.15	0.138	0.188898	0.1103	0.2292	0.0908	0.2095	0.2699	0.11	0.2	0.11	0.19	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.236373	NA	NA	NA	NA	NA	0.109	NA	3.8897
1263	19	41601609	41601609	T	G	intronic	CYP2A13	NA	NA	NA	intronic	ENSG00000197838	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs1709082	0.17	0.17	0.153	0.202676	0.1103	0.0685	0.2622	0.3707	0.1667	0.11	0.06	0.21	0.38	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.01916	NA	NA	NA	NA	NA	0.196	NA	3.8897
1263	19	54722911	54722911	T	C	intronic	LILRB3	NA	NA	NA	intronic	ENSG00000170889,ENSG00000204577,ENSG00000244482	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs76887317	0.13	0.13	0.127	0.144169	0.1103	0.002	0.134	0.3396	0.0685	0.1	0.0035	0.12	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.10396	NA	NA	NA	NA	NA	0.145	NA	3.8897
1263	18	43316538	43316538	A	G	exonic	SLC14A1	NA	synonymous SNV	SLC14A1:NM_001146037:exon5:c.A756G:p.P252P,SLC14A1:NM_015865:exon6:c.A588G:p.P196P,SLC14A1:NM_001128588:exon7:c.A756G:p.P252P,SLC14A1:NM_001146036:exon7:c.A588G:p.P196P	exonic	ENSG00000141469	NA	synonymous SNV	ENSG00000141469:ENST00000589322:exon3:c.A192G:p.P64P,ENSG00000141469:ENST00000535474:exon4:c.A192G:p.P64P,ENSG00000141469:ENST00000586142:exon4:c.A588G:p.P196P,ENSG00000141469:ENST00000589700:exon4:c.A588G:p.P196P,ENSG00000141469:ENST00000590246:exon4:c.A273G:p.P91P,ENSG00000141469:ENST00000402943:exon5:c.A273G:p.P91P,ENSG00000141469:ENST00000436407:exon5:c.A756G:p.P252P,ENSG00000141469:ENST00000502059:exon5:c.A264G:p.P88P,ENSG00000141469:ENST00000321925:exon6:c.A588G:p.P196P,ENSG00000141469:ENST00000415427:exon7:c.A756G:p.P252P	NA	NA	18q12.3	NA	NA	NA	NA	rs2298718	0.71	0.71	0.691	0.711262	0.5865	0.9315	0.7464	0.646	0.6759	0.58	0.92	0.73	0.64	0.6357	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.393639	NA	NA	0.554767	0.633227	ID=COSM1480332,COSM438130;OCCURENCE=1(breast)	0.638	NA	3.8896996
1263	22	20128880	20128880	G	A	intronic	ZDHHC8	NA	NA	NA	intronic	ENSG00000099904	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs2286930	0.05	0.05	NA	0.0625	0.0537	0.0833	0.0115	0.0484	0.1053	0.06	0.07	0.01	0.04	0.0569	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.441559	NA	NA	NA	NA	NA	0.007	NA	3.8894
1263	22	20128881	20128881	A	C	intronic	ZDHHC8	NA	NA	NA	intronic	ENSG00000099904	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs2286931	0.05	0.05	NA	0.0623003	0.0537	0.0823	0.0115	0.0484	0.1053	0.06	0.07	0.01	0.04	0.0569	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.573895	NA	NA	NA	NA	NA	NA	NA	3.8894
1263	3	148899775	148899775	C	T	intronic	CP	NA	NA	NA	intronic	ENSG00000047457	NA	NA	NA	NA	NA	3q24	NA	NA	NA	NA	rs35593818	0.02	0.02	0.017	0.0189696	0.0368	0.001	0.0259	0.0091	0.0276	0.03	0.0017	0.03	0.02	0.0322	0.042	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.130242	NA	NA	0.041628	0.011575	NA	0.072	NA	3.889372
1263	2	131266530	131266530	C	A	exonic	POTEI	NA	synonymous SNV	POTEI:NM_001277406:exon1:c.G279T:p.T93T	exonic	ENSG00000196834	NA	synonymous SNV	ENSG00000196834:ENST00000451531:exon1:c.G279T:p.T93T	NA	NA	2q21.1	NA	NA	NA	NA	rs10737928	0.84	0.84	0.831	0.858826	0.8738	0.9891	0.9063	0.652	0.955	0.86	0.95	0.86	0.68	0.9035	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.428833	NA	NA	NA	NA	NA	0.029	NA	3.8893666
1263	4	8318199	8318199	A	C	intergenic	HTRA3,ACOX3	dist=9361;dist=49810	NA	NA	intergenic	ENSG00000170801,ENSG00000249145	dist=9361;dist=3704	NA	NA	NA	NA	4p16.1	NA	Name=ERalpha_a	NA	NA	rs4696809	0.52	0.52	0.506	0.522364	0.4443	0.6399	0.5548	0.4955	0.4949	0.44	0.68	0.5	0.49	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.514302	NA	NA	NA	NA	NA	0.493	NA	3.8890334
1263	21	46932383	46932383	G	A	UTR3	COL18A1	NM_130445:c.*71G>A,NM_030582:c.*71G>A	NA	NA	UTR3	ENSG00000182871	ENST00000400337:c.*71G>A,ENST00000355480:c.*71G>A,ENST00000359759:c.*71G>A,ENST00000342220:c.*71G>A	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs8199	0.49	0.49	0.473	0.509385	0.4443	0.5625	0.4294	0.5567	0.5143	0.42	0.56	0.43	0.54	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.671473	NA	NA	NA	NA	NA	0.442	NA	3.8890334
1263	4	166325831	166325831	A	G	intronic	CPE	NA	NA	NA	ncRNA_exonic	ENSG00000251596	NA	NA	NA	NA	NA	4q32.3	NA	NA	NA	NA	rs2241813	0.47	0.47	0.459	0.473243	0.4443	0.4623	0.3732	0.6172	0.3906	0.44	0.43	0.39	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.569858	NA	NA	NA	NA	NA	0.507	NA	3.8890333
1263	12	3390867	3390867	T	C	intronic	TSPAN9	NA	NA	NA	intronic	ENSG00000011105	NA	NA	NA	NA	NA	12p13.32	NA	NA	NA	NA	rs71577846	0.02	0.02	0.02	0.0175719	0.0417	NA	0.0259	NA	0.0286	0.05	NA	0.03	NA	0.0323	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.100061	NA	NA	0.036977	0.007944	NA	0.014	NA	3.889023
1263	13	113819005	113819005	C	T	intronic	PROZ	NA	NA	NA	intronic	ENSG00000126231	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs45596441	0.02	0.02	0.014	0.0153754	0.0417	NA	0.0317	0.0015	0.0112	0.03	NA	0.03	0.002	0.0302	0.039	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.20929	NA	NA	0.039097	0.007263	NA	0.014	NA	3.889003
1263	1	79356939	79356939	A	G	intronic	ELTD1	NA	NA	NA	intronic	ENSG00000162618	NA	NA	NA	NA	NA	1p31.1	NA	NA	NA	NA	rs17102364	0.02	0.02	0.025	0.0273562	0.0368	0.001	0.0259	0.028	0.045	0.04	NA	0.02	0.03	0.0369	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.218375	NA	NA	0.037584	0.026951	NA	0.036	NA	3.888716
1263	1	12901140	12901140	G	T	intergenic	PRAMEF11,LOC649330	dist=9876;dist=6096	NA	NA	ncRNA_exonic	ENSG00000231103	NA	NA	NA	NA	NA	1p36.21	NA	NA	NA	NA	rs112286527	0.06	0.06	0.062	0.0660942	0.1113	0.0188	0.0922	0.0272	0.1022	0.11	0.01	0.09	0.03	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.033381	NA	NA	NA	NA	NA	0.036	NA	3.8887
1263	2	48936006	48936006	G	A	intronic	LHCGR,STON1-GTF2A1L	NA	NA	NA	intronic	ENSG00000068781,ENSG00000138039,ENSG00000242441	NA	NA	NA	NA	NA	2p16.3	NA	NA	NA	NA	rs73928211	0.09	0.09	0.085	0.0876597	0.1113	0.001	0.0965	0.1415	0.0736	0.11	NA	0.09	0.16	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.666931	NA	NA	NA	NA	NA	0.087	NA	3.8887
1263	11	73141627	73141627	C	G	intronic	FAM168A	NA	NA	NA	intronic	ENSG00000054965	NA	NA	NA	NA	NA	11q13.4	NA	NA	NA	NA	rs11823913	0.18	0.18	0.173	0.203075	0.1113	0.0377	0.0994	0.5446	0.0798	0.11	0.04	0.09	0.49	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.584795	NA	NA	NA	NA	NA	0.275	NA	3.8887
1263	12	120541570	120541570	G	A	intronic	RAB35	NA	NA	NA	intronic	ENSG00000111737	NA	NA	NA	NA	NA	12q24.23	NA	NA	NA	NA	rs17499109	0.05	0.05	0.055	0.0403355	0.1113	0.001	0.0418	0.0068	0.0521	0.11	NA	0.04	0.02	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.51534	NA	NA	NA	NA	NA	0.072	NA	3.8887
1263	16	20395868	20395868	C	T	intronic	PDILT	NA	NA	NA	intronic	ENSG00000169340	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs9936599	0.11	0.11	0.104	0.107029	0.1113	0.0377	0.1037	0.18	0.0777	0.11	0.05	0.1	0.2	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.418138	NA	NA	NA	NA	NA	0.123	NA	3.8887
1263	16	20395908	20395908	T	C	intronic	PDILT	NA	NA	NA	intronic	ENSG00000169340	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs9926996	0.16	0.16	0.154	0.166933	0.1113	0.0744	0.1124	0.3169	0.1554	0.11	0.08	0.12	0.34	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.555574	NA	NA	NA	NA	NA	0.203	NA	3.8887
1263	19	581253	581253	A	C	intronic	BSG	NA	NA	NA	intronic	ENSG00000172270	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs113033881	0.14	0.14	0.083	0.213858	0.1113	0.2312	0.098	0.2988	0.2689	0.09	0.18	0.1	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.242266	NA	NA	NA	NA	NA	NA	NA	3.8887
1263	19	11226944	11226944	C	T	intronic	LDLR	NA	NA	NA	intronic	ENSG00000130164	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs4508523	0.26	0.26	0.288	0.262979	0.1113	0.3591	0.1369	0.4357	0.1759	0.12	0.37	0.12	0.46	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.483034	NA	NA	NA	NA	NA	0.246	NA	3.8887
1263	19	20067416	20067416	C	T	intergenic	ZNF93,ZNF682	dist=21034;dist=47811	NA	NA	ncRNA_intronic	ENSG00000267268	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs73924111	0.22	0.22	0.216	0.242612	0.1113	0.1895	0.2262	0.4743	0.1309	0.12	0.16	0.2	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.486669	NA	NA	NA	NA	NA	0.232	NA	3.8887
1263	11	47440758	47440758	G	A	intronic	PSMC3	NA	NA	NA	intronic	ENSG00000165916	NA	NA	NA	NA	Name=Serum albumin level	11p11.2	NA	NA	NA	NA	rs2293579	0.29	0.29	0.3	0.318291	0.3698	0.3968	0.255	0.1157	0.5031	0.37	0.33	0.27	0.14	0.3556	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.826916	NA	NA	0.386342	0.165834	NA	0.254	NA	3.888258
1263	9	131591372	131591372	T	A	intronic	C9orf114	NA	NA	NA	intronic	ENSG00000198917	NA	NA	NA	NA	NA	9q34.11	NA	NA	NA	NA	rs2293967	0.04	0.04	0.042	0.0415335	0.0398	0.0476	0.0317	0.0499	0.0327	0.04	0.05	0.04	0.05	0.0371	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.382696	1.382696	NA	0.035	0.04857	NA	0.058	NA	3.8881
1263	12	9352945	9352945	A	C	intronic	PZP	NA	NA	NA	intronic	ENSG00000126838	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs139073960	0.02	0.02	0.017	0.0205671	0.0527	NA	0.0259	0.0015	0.0307	0.05	NA	0.03	0.0041	0.0285	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.258991	NA	NA	0.030712	0.007717	NA	0.007	NA	3.888088
1263	3	33416935	33416935	T	C	intronic	FBXL2	NA	NA	NA	intronic	ENSG00000153558	NA	NA	NA	NA	NA	3p22.3	NA	NA	NA	NA	rs34472793	0.02	0.02	0.016	0.014377	0.0447	0.001	0.0288	NA	0.0061	0.04	0.0017	0.04	NA	0.0276	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.483927	2.483927	NA	0.039767	0.004766	NA	0.014	NA	3.887933
1263	13	25525488	25525488	G	A	ncRNA_intronic	TPTE2P1	NA	NA	NA	ncRNA_intronic	ENSG00000253771	NA	NA	NA	NA	NA	13q12.13	NA	NA	NA	NA	rs2167398	0.35	0.35	0.326	0.398562	0.4026	0.2986	0.3184	0.4395	0.499	0.37	0.3	0.34	0.42	0.3762	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.799766	NA	NA	NA	NA	NA	0.377	NA	3.8878666
1263	2	48725563	48725563	G	A	intronic	PPP1R21	NA	NA	NA	intronic	ENSG00000162869	NA	NA	NA	NA	NA	2p16.3	NA	NA	NA	NA	rs77596425	0.06	0.06	0.047	0.0375399	0.1123	NA	0.0519	0.025	0.0061	0.12	NA	0.07	0.02	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.216631	NA	NA	NA	NA	NA	0.022	NA	3.8877
1263	2	48734598	48734598	A	C	intronic	PPP1R21	NA	NA	NA	intronic	ENSG00000162869	NA	NA	NA	NA	NA	2p16.3	NA	NA	NA	NA	rs76955615	0.07	0.07	0.07	0.057508	0.1123	NA	0.0605	0.0847	0.0215	0.12	NA	0.07	0.09	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.240013	NA	NA	NA	NA	NA	0.029	NA	3.8877
1263	3	132219554	132219554	T	C	intronic	DNAJC13	NA	NA	NA	intronic	ENSG00000138246	NA	NA	NA	NA	NA	3q22.1	NA	NA	NA	NA	rs11925382	0.13	0.13	0.12	0.1252	0.1123	0.1478	0.1398	0.0968	0.1431	0.13	0.13	0.14	0.1	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.834949	NA	NA	NA	NA	NA	0.101	NA	3.8877
1263	3	152018223	152018223	T	G	intronic	MBNL1	NA	NA	NA	intronic	ENSG00000152601	NA	NA	NA	NA	NA	3q25.1	NA	NA	NA	NA	rs17368446	0.06	0.06	0.06	0.0425319	0.1123	0.001	0.0692	0.0076	0.0419	0.11	NA	0.08	0.01	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.115799	NA	NA	NA	NA	NA	0.08	NA	3.8877
1263	6	31117673	31117673	C	T	intronic	CCHCR1	NA	NA	NA	intronic	ENSG00000204536	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs112640945	0.09	0.09	0.073	0.0784744	0.1123	0.0347	0.1369	0.0567	0.0767	0.12	0.04	0.15	0.05	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.033267	NA	NA	NA	NA	NA	0.051	NA	3.8877
1263	7	95499066	95499066	C	A	intronic	DYNC1I1	NA	NA	NA	intronic	ENSG00000158560	NA	NA	NA	NA	NA	7q21.3	NA	NA	NA	NA	rs3757696	0.24	0.24	0.232	0.29972	0.1123	0.4812	0.1196	0.3555	0.3579	0.11	0.43	0.14	0.3	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.933532	NA	NA	NA	NA	NA	0.167	NA	3.8877
1263	12	125450416	125450416	G	T	intronic	DHX37	NA	NA	NA	intronic	ENSG00000150990	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs73229568	0.08	0.08	0.091	0.08127	0.1123	0.0784	0.0562	0.0567	0.1033	0.11	0.08	0.06	0.07	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.835681	NA	NA	NA	NA	NA	0.167	NA	3.8877
1263	19	22646850	22646850	A	G	intergenic	ZNF98,LOC440518	dist=41702;dist=132209	NA	NA	ncRNA_exonic	ENSG00000269138	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs7258729	0.14	0.14	0.13	0.17492	0.1123	0.2083	0.0922	0.1921	0.2403	0.1	0.15	0.11	0.2	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.755048	NA	NA	NA	NA	NA	0.159	NA	3.8877
1263	19	22646882	22646882	T	C	intergenic	ZNF98,LOC440518	dist=41734;dist=132177	NA	NA	ncRNA_intronic	ENSG00000269138	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs7259890	0.14	0.14	0.128	0.17472	0.1123	0.2083	0.0922	0.1921	0.2393	0.1	0.15	0.11	0.2	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.952442	NA	NA	NA	NA	NA	0.159	NA	3.8877
1263	19	22647332	22647332	C	T	intergenic	ZNF98,LOC440518	dist=42184;dist=131727	NA	NA	ncRNA_intronic	ENSG00000269138	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs7259503	0.14	0.14	0.114	0.17472	0.1123	0.2083	0.0922	0.1921	0.2393	0.1	0.15	0.11	0.2	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.005323	NA	NA	NA	NA	NA	0.13	NA	3.8877
1263	19	22647350	22647350	T	C	intergenic	ZNF98,LOC440518	dist=42202;dist=131709	NA	NA	ncRNA_exonic	ENSG00000269138	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs10426790	0.14	0.14	0.121	0.17472	0.1123	0.2083	0.0922	0.1921	0.2393	0.1	0.15	0.11	0.2	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.649413	NA	NA	NA	NA	NA	0.13	NA	3.8877
1263	19	22647379	22647379	T	C	intergenic	ZNF98,LOC440518	dist=42231;dist=131680	NA	NA	ncRNA_exonic	ENSG00000269138	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs10406090	0.14	0.14	0.112	0.17472	0.1123	0.2083	0.0922	0.1921	0.2393	0.1	0.15	0.11	0.2	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.585176	NA	NA	NA	NA	NA	0.072	NA	3.8877
1263	16	19067933	19067933	G	A	exonic	TMC7	NA	synonymous SNV	TMC7:NM_001160364:exon14:c.G1611A:p.T537T,TMC7:NM_024847:exon14:c.G1941A:p.T647T	exonic	ENSG00000170537	NA	synonymous SNV	ENSG00000170537:ENST00000304381:exon14:c.G1941A:p.T647T,ENSG00000170537:ENST00000421369:exon14:c.G1611A:p.T537T,ENSG00000170537:ENST00000569532:exon14:c.G1941A:p.T647T	NA	NA	16p12.3	NA	NA	NA	NA	rs17854511	0.52	0.52	0.505	0.471246	0.6193	0.754	0.5	0.0946	0.5164	0.6	0.76	0.53	0.11	0.561	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.583173	NA	NA	0.598837	0.183204	NA	0.478	NA	3.8875296
1263	7	39243963	39243963	T	A	intronic	POU6F2	NA	NA	NA	intronic	ENSG00000106536	NA	NA	NA	NA	NA	7p14.1	Score=845;Name=V$BRN2_01	NA	NA	NA	rs35792719	0.34	0.34	0.31	0.361022	0.3648	0.1468	0.4524	0.3873	0.4775	0.35	0.19	0.4	0.45	0.3833	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.662204	NA	NA	0.364387	0.371085	NA	0.312	NA	3.887513
1263	14	64557567	64557567	C	T	intronic	SYNE2	NA	NA	NA	intronic	ENSG00000054654,ENSG00000140009	NA	NA	NA	NA	NA	14q23.2	NA	NA	NA	NA	rs10137916	0.06	0.06	0.061	0.0664936	0.0268	NA	0.0303	0.1861	0.0399	0.03	NA	0.04	0.2	0.0456	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.417069	NA	NA	0.040233	0.139809	NA	0.101	NA	3.887367
1263	4	121958091	121958091	T	G	exonic	NDNF	NA	synonymous SNV	NDNF:NM_024574:exon4:c.A1035C:p.L345L	exonic	ENSG00000173376	NA	synonymous SNV	ENSG00000173376:ENST00000379692:exon4:c.A1035C:p.L345L	NA	NA	4q27	NA	NA	NA	NA	rs3733558	0.49	0.49	0.447	0.429113	0.6113	0.6458	0.4726	0.09	0.4458	0.61	0.65	0.5	0.1	0.5472	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.091164	NA	NA	0.62093	0.177712	ID=COSM1131290;OCCURENCE=1(prostate)	0.449	NA	3.8872366
1263	5	147505116	147505116	G	A	exonic	SPINK5	NA	synonymous SNV	SPINK5:NM_001127698:exon29:c.G2769A:p.A923A	exonic	ENSG00000133710	NA	synonymous SNV	ENSG00000133710:ENST00000359874:exon29:c.G2769A:p.A923A	NA	NA	5q32	NA	NA	NA	NA	rs3764930	0.46	0.46	0.427	0.453275	0.5915	0.4821	0.6225	0.1876	0.5204	0.56	0.46	0.57	0.21	0.5748	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.468333	NA	NA	0.613205	0.262755	NA	0.399	NA	3.8871616
1263	3	54905685	54905685	C	G	intronic	CACNA2D3	NA	NA	NA	intronic	ENSG00000157445	NA	NA	NA	NA	NA	3p14.3	NA	NA	NA	NA	rs1882317	0.11	0.11	0.129	0.134585	0.0298	0.0923	0.0375	0.2799	0.1585	0.03	0.1	0.05	0.29	0.0583	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.60997	NA	NA	0.024789	0.227019	NA	0.196	NA	3.887111
1263	17	79173462	79173462	C	T	intronic	AZI1	NA	NA	NA	ncRNA_exonic	ENSG00000262115	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs906175	0.43	0.43	0.359	0.420128	0.4463	0.63	0.611	0.0204	0.5818	0.45	0.63	0.59	0.04	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.407264	NA	NA	NA	NA	NA	0.37	NA	3.8870333
1263	1	225409813	225409813	T	C	intronic	DNAH14	NA	NA	NA	intronic	ENSG00000185842	NA	NA	NA	NA	NA	1q42.12	NA	NA	NA	NA	rs669326	0.2	0.2	0.188	0.221246	0.1133	0.3681	0.2003	0.2262	0.1892	0.11	0.35	0.18	0.2	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.62829	NA	NA	NA	NA	NA	0.196	NA	3.8867
1263	4	158242512	158242512	T	C	intronic	GRIA2	NA	NA	NA	intronic	ENSG00000120251	NA	NA	NA	NA	NA	4q32.1	NA	NA	NA	NA	rs11722093	0.06	0.06	0.066	0.0465256	0.1133	0.002	0.0634	0.0325	0.0307	0.11	NA	0.09	0.04	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.558486	NA	NA	NA	NA	NA	0.029	NA	3.8867
1263	5	7891610	7891610	A	G	intronic	MTRR	NA	NA	NA	intronic	ENSG00000124275	NA	NA	NA	NA	NA	5p15.31	NA	NA	NA	NA	rs2303081	0.2	0.2	0.19	0.226438	0.1133	0.1677	0.3271	0.3676	0.1411	0.1	0.18	0.27	0.32	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.271541	NA	NA	NA	NA	NA	0.29	NA	3.8867
1263	9	2033182	2033182	A	C	intronic	SMARCA2	NA	NA	NA	intronic	ENSG00000080503	NA	NA	NA	NA	NA	9p24.3	NA	NA	NA	NA	rs1112533	0.17	0.17	0.179	0.171526	0.1133	0.1786	0.2579	0.2557	0.0491	0.11	0.19	0.22	0.23	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.690575	1.690575	NA	NA	NA	NA	0.174	NA	3.8867
1263	15	31090995	31090995	C	T	intergenic	LOC100288637,HERC2P10	dist=25786;dist=19244	NA	NA	ncRNA_intronic	ENSG00000103832	NA	NA	NA	NA	NA	15q13.2	NA	NA	NA	NA	rs12904833	0.05	0.05	0.04	0.0579073	0.1133	0.0079	0.0576	0.0136	0.1125	0.11	0.01	0.06	0.01	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.520564	NA	NA	NA	NA	NA	0.022	NA	3.8867
1263	15	34536090	34536090	C	T	intronic	SLC12A6	NA	NA	NA	intronic	ENSG00000140199	NA	NA	NA	NA	NA	15q14	NA	NA	NA	NA	rs59209438	0.15	0.15	0.126	0.158946	0.1133	0.2738	0.1599	0.0756	0.1994	0.12	0.26	0.15	0.08	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.01545	NA	NA	NA	NA	NA	0.058	NA	3.8867
1263	11	67196544	67196544	C	G	intronic	RPS6KB2	NA	NA	NA	intronic	ENSG00000175634	NA	NA	NA	NA	NA	11q13.2	NA	NA	Name=3	NA	rs917570	0.28	0.28	0.275	0.233427	0.3946	0.1548	0.2363	0.1936	0.2004	0.42	0.14	0.29	0.21	0.308	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.883422	NA	0.04	0.410834	0.202944	NA	0.319	NA	3.886566
1263	5	76734222	76734222	G	A	intronic	WDR41	NA	NA	NA	intronic	ENSG00000164253	NA	NA	NA	NA	NA	5q13.3	NA	NA	NA	NA	rs7720548	0.09	0.09	0.093	0.118011	0.0268	0.1052	0.0735	0.2103	0.1319	0.03	0.11	0.07	0.17	0.0639	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.695766	NA	NA	0.022791	0.19882	NA	0.101	NA	3.886509
1263	3	193711138	193711138	C	T	ncRNA_exonic	DPPA2P3	NA	NA	NA	ncRNA_exonic	ENSG00000224403	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs9288760	0.86	0.86	0.852	0.874201	0.7803	0.8373	0.8473	0.9834	0.8804	0.79	0.86	0.85	0.98	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.445814	NA	NA	NA	NA	NA	0.884	NA	3.8863666
1263	2	37032529	37032529	G	C	intronic	VIT	NA	NA	NA	intronic	ENSG00000205221	NA	NA	NA	NA	NA	2p22.2	NA	NA	NA	NA	rs75212718	0.02	0.02	0.025	0.0197684	0.0586	NA	0.0331	0.0068	0.0082	0.05	0.0017	0.03	0.01	NA	0.055	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.685587	NA	NA	0.055249	0.00742	NA	0.014	NA	3.886151
1263	19	49520372	49520372	A	T	upstream	LHB	NA	NA	NA	upstream	ENSG00000104826	NA	NA	NA	Score=321;Name=lod=27	NA	19q13.33	NA	Name=Egr-1	NA	NA	rs3752210	0.62	0.62	0.63	0.633187	0.5994	0.3383	0.6542	0.944	0.5368	0.61	0.34	0.65	0.93	0.6023	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.360947	1.360947	NA	0.578837	0.890377	NA	0.717	NA	3.8861296
1263	19	54668392	54668392	G	A	intronic	TMC4	NA	NA	NA	intronic	ENSG00000167608	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs113570942	0.04	0.04	0.035	0.0503195	0.0577	0.0248	0.0346	0.0061	0.1401	0.06	0.03	0.05	0.01	0.0562	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.247182	NA	NA	NA	NA	NA	0.022	NA	3.8861
1263	13	53171317	53171317	C	T	intergenic	TPTE2P3,HNRNPA1L2	dist=10092;dist=20288	NA	NA	intergenic	ENSG00000198384,ENSG00000139675	dist=10095;dist=20288	NA	NA	Score=428;Name=lod=73	NA	13q14.3	NA	NA	NA	NA	rs4885325	0.32	0.32	0.278	0.282348	0.4473	0.2103	0.4654	0.1536	0.2311	0.43	0.2	0.44	0.18	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.513618	NA	NA	NA	NA	NA	0.217	NA	3.8860334
1263	11	9333089	9333089	C	G	intronic	TMEM41B	NA	NA	NA	ncRNA_exonic	ENSG00000254884	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs10840204	0.4	0.4	0.349	0.346446	0.4473	0.5228	0.3401	0.1899	0.2771	0.46	0.51	0.35	0.22	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.383404	NA	NA	NA	NA	NA	0.341	NA	3.8860333
1263	1	109482222	109482222	C	T	intronic	CLCC1	NA	NA	NA	intronic	ENSG00000121940,ENSG00000162641	NA	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	rs11587730	0.02	0.02	NA	0.0129792	0.0388	NA	0.0173	0.0015	0.0123	0.04	NA	0.02	NA	0.0344	0.041	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.611659	NA	NA	0.040823	0.005674	NA	NA	NA	3.885977
1263	2	44126747	44126747	G	A	intronic	LRPPRC	NA	NA	NA	intronic	ENSG00000138095	NA	NA	NA	NA	NA	2p21	NA	NA	NA	NA	rs35113761	0.03	0.03	0.017	0.0195687	0.0398	NA	0.0461	0.0045	0.0204	0.04	NA	0.07	0.002	0.0342	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.423062	NA	NA	0.040126	0.006582	NA	0.087	NA	3.885874
1263	1	11897271	11897271	T	C	intronic	CLCN6	NA	NA	NA	intronic	ENSG00000011021	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs198405	0.12	0.12	0.13	0.162141	0.1143	0.0129	0.1066	0.3676	0.1268	0.1	0.01	0.1	0.31	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.338561	NA	NA	NA	NA	NA	0.174	NA	3.8857
1263	3	1637940	1637940	G	A	intergenic	CNTN6,CNTN4	dist=192662;dist=502610	NA	NA	upstream	ENSG00000184423	NA	NA	NA	Score=747;Name=lod=1442	NA	3p26.3	NA	NA	NA	NA	rs900244	0.49	0.49	0.464	0.509984	0.6143	0.5486	0.4899	0.2337	0.7505	0.63	0.52	0.47	0.24	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.216664	NA	NA	NA	NA	NA	0.543	NA	3.8857
1263	3	132250027	132250027	G	C	intronic	DNAJC13	NA	NA	NA	intronic	ENSG00000138246	NA	NA	NA	NA	NA	3q22.1	NA	NA	NA	NA	rs3816529	0.1	0.1	0.079	0.0930511	0.1143	0.1151	0.1297	0.0053	0.1411	0.13	0.11	0.13	0.01	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.219075	NA	NA	NA	NA	NA	0.065	NA	3.8857
1263	4	2252531	2252531	G	A	intronic	MXD4	NA	NA	NA	intronic	ENSG00000123933	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs2071661	0.26	0.26	0.261	0.251398	0.1143	0.3403	0.1988	0.4017	0.135	0.11	0.34	0.2	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.556211	NA	NA	NA	NA	NA	0.246	NA	3.8857
1263	7	24789449	24789449	G	A	intronic	DFNA5	NA	NA	NA	intronic	ENSG00000105928	NA	NA	NA	NA	NA	7p15.3	NA	NA	NA	NA	rs10235527	0.15	0.15	0.121	0.14996	0.1143	0.1974	0.2392	0.0832	0.1646	0.12	0.19	0.23	0.08	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.580115	NA	NA	NA	NA	NA	0.072	NA	3.8857
1263	7	100552644	100552644	C	A	intergenic	ACHE,MUC12	dist=59103;dist=60260	NA	NA	exonic	ENSG00000169894	NA	synonymous SNV	ENSG00000169894:ENST00000319509:exon1:c.C1395A:p.P465P	NA	NA	7q22.1	NA	NA	NA	NA	rs2904850	NA	NA	NA	0.179513	0.0974	0.3095	0.3804	0.0946	0.1022	NA	NA	NA	NA	0.5169	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.45274	NA	NA	NA	NA	NA	0.442	NA	3.8857
1263	13	59104856	59104856	A	G	intergenic	PCDH17,DIAPH3	dist=801791;dist=1134865	NA	NA	ncRNA_exonic	ENSG00000214335	NA	NA	NA	NA	NA	13q21.1	NA	NA	NA	NA	rs7328487	0.11	0.11	0.106	0.135783	0.1143	0.126	0.0764	0.2549	0.0491	0.09	0.11	0.09	0.16	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.038479	NA	NA	NA	NA	ID=COSN164510;OCCURENCE=1(NS)	0.087	NA	3.8857
1263	14	91247024	91247024	G	A	intronic	TTC7B	NA	NA	NA	intronic	ENSG00000165914	NA	NA	NA	NA	NA	14q32.11	NA	NA	NA	NA	rs8011601	0.3	0.3	0.326	0.338059	0.1143	0.2887	0.1671	0.7141	0.2321	0.12	0.28	0.18	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.599764	NA	NA	NA	NA	NA	0.333	NA	3.8857
1263	17	5034048	5034048	A	G	intronic	USP6	NA	NA	NA	intronic	ENSG00000129204	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs11871054	0.11	0.11	0.087	0.103035	0.1143	0.1558	0.0706	0.0666	0.1094	0.12	0.13	0.09	0.09	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.187758	NA	NA	NA	NA	NA	0.08	NA	3.8857
1263	19	8154350	8154350	G	A	intronic	FBN3	NA	NA	NA	intronic	ENSG00000142449	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs3813782	0.18	0.18	0.145	0.161741	0.1143	0.2391	0.268	0.1293	0.0992	0.12	0.25	0.24	0.14	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.075149	NA	NA	NA	NA	NA	0.101	NA	3.8857
1263	20	3262181	3262181	A	G	intronic	C20orf194	NA	NA	NA	intronic	ENSG00000088854	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs17698336	0.06	0.06	0.036	0.0491214	0.1143	NA	0.0764	0.0068	0.0706	0.11	NA	0.09	0.01	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.493839	1.493839	NA	NA	NA	NA	0.014	NA	3.8857
1263	3	16535229	16535229	C	T	intronic	RFTN1	NA	NA	NA	intronic	ENSG00000131378	NA	NA	NA	Score=346;Name=lod=34	NA	3p24.3	NA	NA	NA	NA	rs3815962	0.38	0.38	0.359	0.400559	0.3529	0.3879	0.4568	0.3608	0.4765	0.37	0.36	0.44	0.39	0.3949	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.902233	NA	NA	0.366512	0.369496	NA	0.246	NA	3.885688
1263	20	57570854	57570854	G	A	intronic	CTSZ	NA	NA	NA	intronic	ENSG00000101160	NA	NA	NA	NA	NA	20q13.32	NA	Name=c-Myc,Pol2	NA	NA	rs3787492	0.29	0.29	0.291	0.277955	0.3946	0.1637	0.2939	0.2927	0.2444	0.39	0.16	0.32	0.27	0.3432	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.189195	NA	NA	0.376512	0.284612	NA	0.355	NA	3.885688
1263	2	68592584	68592584	T	C	intronic	PLEK	NA	NA	NA	ncRNA_exonic	ENSG00000203395	NA	NA	NA	NA	NA	2p14	NA	Name=Pol2-4H8,Pol2,WHIP	NA	NA	rs880668	0.84	0.84	0.836	0.865415	0.7117	0.9454	0.8199	0.9554	0.8517	0.72	0.93	0.8	0.94	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.101614	NA	NA	0.736015	0.928468	NA	0.899	NA	3.8856183
1263	2	165383661	165383661	C	T	intronic	GRB14	NA	NA	NA	intronic	ENSG00000115290	NA	NA	NA	NA	NA	2q24.3	NA	NA	NA	NA	rs34831964	0.02	0.02	0.018	0.0147764	0.0437	NA	0.0216	0.0015	0.0133	0.04	NA	0.01	NA	0.0298	0.041	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.019082	NA	NA	0.040978	0.008174	NA	0.007	NA	3.885522
1263	20	60508197	60508197	C	T	intronic	CDH4	NA	NA	NA	intronic	ENSG00000179242	NA	NA	NA	NA	NA	20q13.33	NA	NA	NA	NA	rs142208243	0.02	0.02	0.02	0.0161741	0.0417	0.001	0.0231	0.0023	0.0194	0.05	0.0017	0.02	0.002	0.0292	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.38769	NA	NA	0.043953	0.01044	NA	0.014	NA	3.885147
1263	1	892460	892460	G	C	intronic	NOC2L	NA	NA	NA	intronic	ENSG00000188976	NA	NA	NA	NA	NA	1p36.33	NA	NA	NA	NA	rs41285802	0.09	0.09	0.096	0.0994409	0.0378	0.0665	0.0764	0.2496	0.0102	0.03	0.07	0.07	0.23	0.0497	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.192678	NA	NA	0.027442	0.215842	NA	0.058	NA	3.885058
1263	4	954311	954311	C	T	UTR3	DGKQ	NM_001347:c.*97G>A	NA	NA	UTR3	ENSG00000145214	ENST00000273814:c.*97G>A,ENST00000509465:c.*97G>A	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs3733349	0.45	0.45	0.457	0.411542	0.4483	0.3433	0.5591	0.4017	0.3528	0.45	0.37	0.56	0.45	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.265888	NA	NA	NA	NA	NA	0.399	NA	3.8850334
1263	19	53995750	53995750	C	T	UTR3	ZNF813	NM_001004301:c.*410C>T	NA	NA	UTR3	ENSG00000198346	ENST00000396403:c.*410C>T	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs2708843	0.46	0.46	0.482	0.500799	0.4483	0.3026	0.4395	0.6989	0.5348	0.43	0.3	0.45	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.811474	NA	NA	NA	NA	NA	0.543	NA	3.8850334
1263	20	44470676	44470676	T	C	exonic	SNX21	NA	synonymous SNV	SNX21:NM_152897:exon5:c.T594C:p.S198S	exonic	ENSG00000124104	NA	synonymous SNV	ENSG00000124104:ENST00000342644:exon5:c.T594C:p.S198S	NA	NA	20q13.12	NA	NA	NA	NA	rs3848713	0.54	0.54	0.504	0.516174	0.6004	0.5188	0.6801	0.3918	0.4785	0.62	0.51	0.65	0.37	0.5799	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.515818	NA	NA	0.601343	0.433308	NA	0.507	NA	3.8850236
1264	1	1650920	1650920	G	A	intronic	CDK11A,CDK11B	NA	NA	NA	ncRNA_intronic	ENSG00000268575	NA	NA	NA	NA	NA	1p36.33	NA	NA	NA	NA	rs36191908	0.38	0.38	0.277	0.000199681	NA	NA	0.0014	NA	NA	0.43	0.32	0.44	0.35	0.4484	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.958949	NA	NA	NA	NA	NA	0.014	NA	3.8849333
1264	14	107179268	107179268	A	G	intergenic	LINC00221,NONE	dist=227739;dist=NONE	NA	NA	UTR5	ENSG00000211974	ENST00000390634:c.-6T>C	NA	NA	NA	NA	14q32.33	NA	Name=Pol2	NA	NA	rs10144801	0.36	0.36	0.342	0.532548	0.3241	0.4226	0.3761	0.7716	0.6483	0.27	0.37	0.33	0.51	0.3546	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.495641	NA	NA	0.26979	0.388167	NA	0.471	NA	3.8848434
1264	20	43142720	43142720	A	G	intronic	SERINC3	NA	NA	NA	intronic	ENSG00000132824	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs41303901	0.04	0.04	0.03	0.0427316	0.0378	0.0069	0.0317	0.0976	0.0184	0.04	0.0035	0.03	0.09	0.0366	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.22083	NA	NA	0.040814	0.086927	NA	0.036	NA	3.884786
1264	1	186645488	186645488	A	G	intronic	PTGS2	NA	NA	NA	intronic	ENSG00000073756	NA	NA	NA	NA	NA	1q31.1	NA	NA	NA	NA	rs4648276	0.1	0.1	0.095	0.114816	0.1153	0.0397	0.1715	0.1097	0.1585	0.12	0.05	0.18	0.08	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.40028	NA	NA	NA	NA	NA	0.159	NA	3.8847
1264	2	138321018	138321018	G	C	intronic	THSD7B	NA	NA	NA	intronic	ENSG00000144229	NA	NA	NA	NA	NA	2q22.1	NA	NA	NA	NA	rs17742691	0.05	0.05	0.044	0.0413339	0.1153	0.001	0.0432	0.0136	0.0429	0.11	NA	0.04	0.01	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.522918	3.522918	NA	NA	NA	NA	0.065	NA	3.8847
1264	4	6058620	6058620	C	T	intronic	JAKMIP1	NA	NA	NA	intronic	ENSG00000152969	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs16838135	0.14	0.14	0.149	0.16873	0.1153	0.001	0.1066	0.4168	0.1053	0.12	NA	0.09	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.858952	NA	NA	NA	NA	NA	0.196	NA	3.8847
1264	13	39451557	39451557	A	T	intronic	FREM2	NA	NA	NA	intronic	ENSG00000150893	NA	NA	NA	NA	NA	13q13.3	NA	NA	NA	NA	rs1945509	0.16	0.16	0.137	0.173123	0.1153	0.0972	0.3242	0.2194	0.1411	0.1	0.11	0.27	0.23	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.301739	NA	NA	NA	NA	NA	0.159	NA	3.8847
1264	14	65734491	65734491	T	A	intergenic	MAX,MIR4708	dist=165229;dist=67345	NA	NA	ncRNA_intronic	ENSG00000258760	NA	NA	NA	NA	NA	14q23.3	NA	NA	NA	NA	rs1256511	0.26	0.26	0.272	0.269369	0.1153	0.2738	0.1167	0.5855	0.1043	0.11	0.28	0.14	0.55	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.093662	NA	NA	NA	NA	NA	0.246	NA	3.8847
1264	17	40940579	40940579	G	A	intronic	WNK4	NA	NA	NA	intronic	ENSG00000126562	NA	NA	NA	NA	NA	17q21.31	NA	NA	NA	NA	rs61755606	0.06	0.06	0.056	0.0493211	0.1153	NA	0.0562	0.0091	0.0818	0.12	NA	0.06	0.02	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.808451	NA	NA	NA	NA	NA	0.109	NA	3.8847
1264	17	62248386	62248386	C	G	intronic	TEX2	NA	NA	NA	intronic	ENSG00000136478	NA	NA	NA	NA	NA	17q23.3	NA	NA	NA	NA	rs12941171	0.16	0.16	0.172	0.169529	0.1153	0.001	0.0807	0.4652	0.0624	0.12	0.0017	0.09	0.46	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.082561	2.082561	NA	NA	NA	NA	0.181	NA	3.8847
1264	19	2109812	2109812	G	C	intronic	AP3D1	NA	NA	NA	intronic	ENSG00000065000	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs79162849	0.07	0.07	0.056	0.0770767	0.1153	NA	0.0677	0.0749	0.1268	0.11	NA	0.09	0.08	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.63351	NA	NA	NA	NA	NA	0.065	NA	3.8847
1264	19	4159873	4159873	A	G	intronic	CREB3L3	NA	NA	NA	intronic	ENSG00000060566	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs2240702	0.15	0.15	0.13	0.127396	0.1153	0.2897	0.1182	0.0234	0.1196	0.13	0.29	0.13	0.04	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.286272	NA	NA	NA	NA	NA	0.152	NA	3.8847
1264	1	186295021	186295021	A	G	ncRNA_intronic	MIR548F1	NA	NA	NA	intronic	ENSG00000047410	NA	NA	NA	NA	NA	1q31.1	NA	NA	NA	NA	rs76057663	0.12	0.12	0.12	0.120008	0.1511	0.13	0.0692	0.1036	0.136	0.15	0.11	0.08	0.09	0.1404	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.036139	NA	NA	0.157396	0.10094	NA	0.116	NA	3.8844373
1264	2	28763230	28763230	C	A	intronic	PLB1	NA	NA	NA	intronic	ENSG00000163803	NA	NA	NA	NA	NA	2p23.2	NA	NA	NA	NA	rs79986357	0.04	0.04	0.046	0.0363419	0.0467	0.001	0.0504	0.0688	0.0082	0.04	0.0017	0.04	0.08	0.0308	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.323503	1.323503	NA	0.038256	0.054925	NA	0.051	NA	3.884244
1264	16	1552876	1552876	C	G	intronic	TELO2	NA	NA	NA	intronic	ENSG00000100726	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs2294603	0.1	0.1	0.112	0.123203	0.0586	0.0565	0.0418	0.2716	0.1155	0.06	0.04	0.05	0.27	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.421907	NA	NA	0.057197	0.246387	NA	0.109	NA	3.884203
1264	6	116263819	116263819	C	A	intronic	FRK	NA	NA	NA	intronic	ENSG00000111816	NA	NA	NA	NA	NA	6q22.1	NA	NA	NA	NA	rs41289918	0.09	0.09	0.055	0.0684904	0.0358	0.1369	0.1844	0.0091	0.0297	0.04	0.15	0.17	0.02	0.0586	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.969278	NA	NA	0.021744	0.004766	NA	0.043	NA	3.883856
1264	4	9514776	9514776	C	T	intergenic	DEFB131,MIR548I2	dist=62536;dist=43013	NA	NA	ncRNA_exonic	ENSG00000249866	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs34056993	0.12	0.12	0.096	0.141973	0.1163	0.0446	0.2046	0.2375	0.0951	0.12	0.03	0.16	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.031857	NA	NA	NA	NA	NA	0.007	NA	3.8837
1264	7	44803944	44803944	G	T	intronic	ZMIZ2	NA	NA	NA	intronic	ENSG00000122515	NA	NA	NA	NA	NA	7p13	NA	NA	NA	NA	rs79784917	0.08	0.08	0.058	0.0670927	0.1163	0.0308	0.1599	0.0083	0.0675	0.11	0.04	0.14	0.01	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.557547	NA	NA	NA	NA	NA	0.167	NA	3.8837
1264	8	70772285	70772285	C	G	intergenic	SLCO5A1,PRDM14	dist=24986;dist=191601	NA	NA	ncRNA_exonic	ENSG00000255107	NA	NA	NA	NA	NA	8q13.3	NA	NA	NA	NA	rs59676355	0.12	0.12	0.097	0.137979	0.1163	0.1964	0.1239	0.0439	0.2372	0.12	0.19	0.12	0.03	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.266092	NA	NA	NA	NA	NA	0.109	NA	3.8837
1264	15	52662670	52662670	T	C	intronic	MYO5A	NA	NA	NA	intronic	ENSG00000197535	NA	NA	NA	NA	NA	15q21.2	NA	NA	NA	NA	rs2290335	0.28	0.28	0.271	0.323682	0.1163	0.5694	0.2939	0.2806	0.363	0.12	0.53	0.24	0.27	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.860286	2.860286	NA	NA	NA	NA	0.268	NA	3.8837
1264	17	1411597	1411597	C	T	intronic	INPP5K	NA	NA	NA	intronic	ENSG00000132376	NA	NA	NA	NA	NA	17p13.3	NA	NA	NA	NA	rs2286868	0.12	0.12	0.123	0.0996406	0.1163	0.128	0.0807	0.1278	0.0286	0.12	0.12	0.09	0.14	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.853055	1.853055	NA	NA	NA	NA	0.138	NA	3.8837
1264	17	78039178	78039178	A	G	intronic	CCDC40	NA	NA	NA	intronic	ENSG00000141519	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs80207190	0.08	0.08	0.095	0.071885	0.1163	0.001	0.0706	0.0893	0.0767	0.12	NA	0.07	0.11	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.118275	NA	NA	NA	NA	NA	0.058	NA	3.8837
1264	22	17446906	17446906	G	A	intronic	GAB4	NA	NA	NA	intronic	ENSG00000215568	NA	NA	NA	NA	NA	22q11.1	NA	NA	NA	NA	rs73145683	0.09	0.09	0.085	0.0864617	0.1163	0.0188	0.1873	0.1104	0.0215	0.12	0.03	0.17	0.08	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.617058	NA	NA	NA	NA	NA	0.188	NA	3.8837
1264	11	33052893	33052893	C	G	intronic	DEPDC7	NA	NA	NA	intronic	ENSG00000121690	NA	NA	NA	NA	NA	11p13	NA	NA	NA	NA	rs56308649	0.02	0.02	0.01	0.0139776	0.0447	NA	0.0216	0.0015	0.0082	0.04	NA	0.02	0.002	0.0312	0.041	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.917546	NA	NA	0.040544	0.007625	NA	0.109	NA	3.883556
1264	9	132618650	132618650	C	G	intronic	USP20	NA	NA	NA	intronic	ENSG00000136878	NA	NA	NA	NA	NA	9q34.11	NA	NA	NA	NA	rs41278740	0.02	0.02	0.021	0.0145767	0.0477	NA	0.0216	0.003	0.0061	0.04	NA	0.03	0.01	0.0268	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.676509	3.676509	NA	0.042029	0.007653	NA	0.029	NA	3.883471
1264	1	232551416	232551416	G	A	intronic	SIPA1L2	NA	NA	NA	intronic	ENSG00000116991	NA	NA	NA	NA	NA	1q42.2	NA	NA	Name=14	NA	rs12569188	0.34	0.34	0.322	0.315096	0.3827	0.4306	0.3905	0.1589	0.2843	0.36	0.44	0.42	0.15	0.3601	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.36298	NA	NA	0.374031	0.201434	NA	0.246	NA	3.883169
1264	4	8242740	8242740	G	C	UTR3	SH3TC1	NM_018986:c.*58G>C	NA	NA	UTR3	ENSG00000125089	ENST00000245105:c.*58G>C,ENST00000539824:c.*58G>C,ENST00000515682:c.*3921G>C	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs8153	0.29	0.29	0.259	0.228834	0.4503	0.2212	0.2507	0.0681	0.2106	0.46	0.23	0.27	0.09	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.176391	NA	NA	NA	NA	NA	0.319	NA	3.8830334
1264	16	69446526	69446526	G	A	intergenic	TERF2,CYB5B	dist=26635;dist=11972	NA	NA	intergenic	ENSG00000132604,ENSG00000103018	dist=26635;dist=11902	NA	NA	NA	NA	16q22.1	NA	Name=TCF4	NA	NA	rs153052	0.36	0.36	0.33	0.31869	0.4503	0.2788	0.4424	0.1657	0.3436	0.46	0.29	0.45	0.21	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.606081	NA	NA	NA	NA	NA	0.319	NA	3.8830334
1264	3	158214471	158214471	C	T	intronic	RSRC1	NA	NA	NA	ncRNA_exonic	ENSG00000243314	NA	NA	NA	NA	NA	3q25.32	NA	NA	NA	NA	rs6795376	0.49	0.49	0.491	0.53095	0.4503	0.4038	0.4942	0.6483	0.6125	0.48	0.38	0.49	0.63	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.809643	NA	NA	NA	NA	NA	0.486	NA	3.8830333
1264	19	33417044	33417044	C	T	intronic	CEP89	NA	NA	NA	intronic	ENSG00000121289	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs3813150	0.07	0.07	0.062	0.0754792	0.0557	0.0556	0.0648	0.0666	0.136	0.05	0.06	0.09	0.08	NA	0.098	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.522148	NA	NA	0.061418	0.054847	NA	0.094	NA	3.882882
1264	1	157548669	157548669	T	A	intronic	FCRL4	NA	NA	NA	intronic	ENSG00000163518	NA	NA	NA	NA	NA	1q23.1	NA	NA	Name=2	NA	rs1885561	0.44	0.44	0.463	0.440895	0.3897	0.245	0.3617	0.7882	0.2822	0.38	0.24	0.4	0.81	0.3678	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.563429	NA	NA	0.359767	0.715388	NA	0.551	NA	3.882733
1264	1	119988512	119988512	G	A	intergenic	HSD3B2,HSD3B1	dist=22850;dist=61314	NA	NA	ncRNA_exonic	ENSG00000203858	NA	NA	NA	NA	NA	1p12	NA	NA	NA	NA	rs10923824	0.28	0.28	0.318	0.338059	0.1173	0.2401	0.2305	0.6188	0.363	0.11	0.28	0.25	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.119686	NA	NA	NA	NA	NA	0.333	NA	3.8827
1264	2	222826492	222826492	C	T	intergenic	EPHA4,PAX3	dist=389482;dist=238114	NA	NA	ncRNA_exonic	ENSG00000226666	NA	NA	NA	NA	NA	2q36.1	NA	NA	NA	NA	rs71432679	0.07	0.07	0.033	0.0439297	0.1173	0.003	0.0951	0.0091	0.0215	0.12	0.01	0.09	0.03	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.609125	NA	NA	NA	NA	NA	0.022	NA	3.8827
1264	1	35852521	35852521	G	T	intronic	ZMYM4	NA	NA	NA	intronic	ENSG00000146463	NA	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	rs615315	0.42	0.42	0.44	0.424321	0.1173	0.5298	0.3127	0.7595	0.2577	0.11	0.57	0.31	0.78	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.921431	NA	NA	NA	NA	NA	0.312	NA	3.8827
1264	1	160109835	160109835	G	A	intronic	ATP1A2	NA	NA	NA	intronic	ENSG00000018625	NA	NA	NA	NA	NA	1q23.2	NA	NA	NA	NA	rs55884181	0.1	0.1	0.092	0.0958466	0.1173	0.0655	0.1282	0.0991	0.0777	0.12	0.05	0.12	0.09	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.568086	NA	NA	NA	NA	NA	0.181	NA	3.8827
1264	3	16450775	16450775	G	T	intronic	RFTN1	NA	NA	NA	intronic	ENSG00000131378	NA	NA	NA	NA	NA	3p24.3	NA	NA	NA	NA	rs62236343	0.06	0.06	0.048	0.057508	0.1173	0.0119	0.0692	0.028	0.0746	0.12	0.01	0.07	0.02	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.693504	NA	NA	NA	NA	NA	0.094	NA	3.8827
1264	4	41259240	41259240	C	G	intronic	UCHL1	NA	NA	NA	intronic	ENSG00000154277	NA	NA	NA	NA	NA	4p13	NA	NA	NA	NA	rs112424642	0.12	0.12	0.099	0.104433	0.1173	0.1528	0.1138	0.0643	0.089	0.13	0.17	0.12	0.05	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.362479	1.362479	NA	NA	NA	NA	0.014	NA	3.8827
1264	7	4150203	4150203	G	C	intronic	SDK1	NA	NA	NA	intronic	ENSG00000146555	NA	NA	NA	NA	NA	7p22.2	NA	NA	NA	NA	rs62438179	0.07	0.07	0.078	0.0788738	0.1173	0.001	0.0692	0.0741	0.1329	0.12	0.0017	0.06	0.1	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.078464	NA	NA	NA	NA	NA	0.065	NA	3.8827
1264	12	2719934	2719934	C	T	intronic	CACNA1C	NA	NA	NA	intronic	ENSG00000151067	NA	NA	NA	NA	NA	12p13.33	NA	NA	NA	NA	rs55641425	0.05	0.05	0.056	0.052516	0.1173	0.005	0.0648	0.0159	0.0757	0.11	0.01	0.07	0.01	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.234592	NA	NA	NA	NA	NA	0.08	NA	3.8827
1264	18	29046430	29046430	T	G	intronic	DSG3	NA	NA	NA	intronic	ENSG00000134757	NA	NA	NA	NA	NA	18q12.1	NA	NA	NA	NA	rs35293326	0.1	0.1	0.099	0.096246	0.1173	0.0804	0.0879	0.1021	0.089	0.11	0.09	0.1	0.1	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.8962	NA	NA	NA	NA	NA	0.109	NA	3.8827
1264	20	61867896	61867896	A	G	intronic	BIRC7	NA	NA	NA	intronic	ENSG00000101197	NA	NA	NA	NA	NA	20q13.33	NA	NA	NA	NA	rs34646256	0.06	0.06	0.045	0.0393371	0.1173	NA	0.0605	0.0121	0.0215	0.12	NA	0.07	0.03	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.416147	NA	NA	NA	NA	NA	0.116	NA	3.8827
1264	9	74862361	74862361	C	T	intronic	GDA	NA	NA	NA	intronic	ENSG00000119125	NA	NA	NA	NA	NA	9q21.13	NA	NA	NA	NA	rs11143200	0.05	0.05	0.046	0.0513179	0.0388	NA	0.0403	0.1407	0.0041	0.03	NA	0.05	0.12	0.0357	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.742513	NA	NA	0.042907	0.133061	NA	0.072	NA	3.882593
1264	15	76032894	76032894	G	A	upstream	DNM1P35	NA	NA	NA	ncRNA_intronic	ENSG00000260288	NA	NA	NA	NA	NA	15q24.2	NA	NA	NA	NA	rs28695212	0.26	0.26	0.223	0.254792	0.2843	0.2371	0.3545	0.2224	0.2157	0.29	0.2	0.32	0.22	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.48195	NA	NA	NA	NA	NA	0.37	NA	3.8823666
1264	1	19199221	19199221	C	T	UTR3	ALDH4A1	NM_001161504:c.*118G>A,NM_003748:c.*118G>A	NA	NA	UTR3	ENSG00000159423	ENST00000538309:c.*118G>A,ENST00000538839:c.*118G>A,ENST00000375341:c.*118G>A	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs11740	0.46	0.46	0.428	0.471446	0.4513	0.6567	0.5519	0.1982	0.6135	0.43	0.67	0.48	0.23	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.102606	NA	NA	NA	NA	NA	0.464	NA	3.8820334
1264	1	207079615	207079615	A	G	intronic	FAIM3	NA	NA	NA	ncRNA_exonic	ENSG00000271680	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs188334	0.29	0.29	0.302	0.245607	0.4513	0.1359	0.3012	0.1793	0.1973	0.45	0.14	0.36	0.2	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.127507	NA	NA	NA	NA	NA	0.391	NA	3.8820333
1264	11	43913707	43913707	G	A	intronic	ALKBH3	NA	NA	NA	intronic	ENSG00000166199	NA	NA	NA	NA	NA	11p11.2	NA	NA	NA	NA	rs3740985	0.06	0.06	0.044	0.0716853	0.0268	0.0248	0.2075	0.0802	0.0583	0.02	0.03	0.2	0.07	0.0605	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.549241	1.549241	NA	0.030698	0.064911	NA	0.065	NA	3.882002
1264	11	34912013	34912013	A	G	intronic	APIP	NA	NA	NA	intronic	ENSG00000149089	NA	NA	NA	NA	NA	11p13	NA	Name=CTCF	NA	NA	rs2303959	0.46	0.46	0.429	0.457468	0.3559	0.7371	0.4035	0.3056	0.5174	0.36	0.71	0.4	0.36	0.4052	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.04504	NA	NA	0.35711	0.308583	NA	0.514	NA	3.88179
1264	3	9831112	9831112	A	G	intronic	TADA3	NA	NA	NA	intronic	ENSG00000171148	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs293790	0.14	0.14	0.14	0.142173	0.1183	0.0466	0.1239	0.2572	0.1227	0.13	0.06	0.13	0.28	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.014414	NA	NA	NA	NA	NA	0.138	NA	3.8817
1264	6	29692729	29692729	T	G	intronic	HLA-F	NA	NA	NA	intronic	ENSG00000204642	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs2072898	0.19	0.19	0.182	0.23143	0.1183	0.2917	0.1628	0.2663	0.2873	0.12	0.27	0.15	0.24	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.237429	1.237429	NA	NA	NA	NA	0.217	NA	3.8817
1264	8	41834902	41834902	T	C	intronic	KAT6A	NA	NA	NA	intronic	ENSG00000083168	NA	NA	NA	NA	NA	8p11.21	NA	NA	NA	NA	rs34473679	0.06	0.06	0.049	0.0463259	0.1183	0.001	0.0706	0.0053	0.0573	0.11	0.0017	0.08	0.01	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.519917	NA	NA	NA	NA	NA	0.014	NA	3.8817
1264	8	131797568	131797568	G	A	intronic	ADCY8	NA	NA	NA	intronic	ENSG00000155897	NA	NA	NA	NA	NA	8q24.22	NA	NA	NA	NA	rs12546275	0.11	0.11	0.091	0.0996406	0.1183	0.1577	0.1239	0.0129	0.1207	0.11	0.16	0.13	0.01	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.044096	NA	NA	NA	NA	NA	0.043	NA	3.8817
1264	16	1255390	1255390	C	T	intronic	CACNA1H	NA	NA	NA	intronic	ENSG00000196557	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs2745165	0.08	0.08	0.054	0.0834665	0.1183	0.0595	0.0793	0.0227	0.1575	0.13	0.05	0.09	0.01	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.637228	NA	NA	NA	NA	NA	0.138	NA	3.8817
1264	18	29049372	29049372	A	G	intronic	DSG3	NA	NA	NA	intronic	ENSG00000134757	NA	NA	NA	NA	NA	18q12.1	NA	NA	NA	NA	rs35777565	0.1	0.1	0.101	0.0974441	0.1183	0.0804	0.0865	0.1067	0.089	0.11	0.09	0.1	0.11	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.879183	NA	NA	NA	NA	NA	0.109	NA	3.8817
1264	20	24939764	24939764	C	T	intronic	CST7	NA	NA	NA	intronic	ENSG00000077984	NA	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	rs45556041	0.09	0.09	0.092	0.0722843	0.1183	0.0605	0.1037	0.025	0.0787	0.11	0.07	0.14	0.03	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.43942	NA	NA	NA	NA	NA	0.051	NA	3.8817
1264	6	30229504	30229504	G	A	ncRNA_intronic	HCG17,HLA-L	NA	NA	NA	ncRNA_intronic	ENSG00000243753,ENSG00000270604	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs2516706	0.33	0.33	0.303	0.372604	0.2435	0.5069	0.4481	0.3011	0.41	0.22	0.47	0.4	0.3	0.2973	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.094473	NA	NA	0.244186	0.278146	NA	0.384	NA	3.8816806
1264	10	27431288	27431288	T	C	intronic	YME1L1	NA	NA	NA	intronic	ENSG00000136758	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs41282208	0.04	0.04	0.03	0.0461262	0.0537	0.004	0.0346	0.0877	0.0337	0.05	0.0035	0.04	0.07	0.0487	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.751726	NA	NA	0.016283	0.032243	NA	0.043	NA	3.881317
1264	7	30662087	30662087	T	C	intronic	GARS	NA	NA	NA	intronic	ENSG00000106105	NA	NA	NA	NA	NA	7p14.3	NA	NA	NA	NA	rs75855065	0.03	0.03	0.029	0.0313498	0.0417	NA	0.0317	0.0628	0.0102	0.04	NA	0.03	0.06	0.034	0.074	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.222745	NA	NA	0.043078	0.073783	NA	0.043	NA	3.881222
1264	6	118320469	118320469	G	A	intronic	SLC35F1	NA	NA	NA	ncRNA_exonic	ENSG00000230202	NA	NA	NA	NA	NA	6q22.2	NA	NA	NA	NA	rs9401042	0.4	0.4	0.37	0.39397	0.4523	0.4812	0.438	0.1694	0.5164	0.46	0.53	0.41	0.17	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.093555	NA	NA	NA	NA	NA	0.362	NA	3.8810333
1264	20	44815602	44815602	A	G	intronic	CDH22	NA	NA	NA	intronic	ENSG00000149654	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs76118291	0.02	0.02	0.019	0.0141773	0.0427	NA	0.0216	0.0023	0.0102	0.04	NA	0.02	0.002	0.0321	0.044	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.520696	1.520696	NA	0.044419	0.008852	NA	0.007	NA	3.880781
1264	9	96415653	96415653	C	T	intronic	PHF2	NA	NA	NA	intronic	ENSG00000197724	NA	NA	NA	Score=512;Name=lod=160	NA	9q22.31	NA	NA	NA	NA	rs3750354	0.37	0.37	0.348	0.308706	0.3767	0.373	0.3415	0.3169	0.138	0.38	0.39	0.36	0.32	0.3529	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.074492	NA	NA	0.389651	0.311847	NA	0.399	NA	3.880749
1264	1	160165572	160165572	T	A	intronic	CASQ1	NA	NA	NA	intronic	ENSG00000143318	NA	NA	NA	NA	NA	1q23.2	NA	NA	NA	NA	rs60043899	0.14	0.14	0.147	0.168131	0.1193	0.0913	0.1455	0.1649	0.318	0.12	0.13	0.13	0.2	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.29212	1.29212	NA	NA	NA	NA	0.203	NA	3.8807
1264	6	160234796	160234796	T	G	intronic	PNLDC1	NA	NA	NA	intronic	ENSG00000146453	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs41267789	0.11	0.11	0.093	0.0954473	0.1193	0.006	0.0922	0.1876	0.0409	0.12	NA	0.11	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.395854	NA	NA	NA	NA	NA	0.087	NA	3.8807
1264	17	1437334	1437334	A	C	intronic	PITPNA	NA	NA	NA	intronic	ENSG00000174238	NA	NA	NA	NA	NA	17p13.3	NA	NA	NA	NA	rs2270229	0.1	0.1	0.088	0.0732827	0.1193	0.129	0.0749	0.0287	0.0276	0.12	0.13	0.09	0.03	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.736191	NA	NA	NA	NA	NA	0.109	NA	3.8807
1264	19	35033408	35033408	A	G	intergenic	WTIP,SCGB1B2P	dist=41323;dist=34230	NA	NA	ncRNA_exonic	ENSG00000248830	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs10406688	0.19	0.19	0.182	0.207867	0.1193	0.1002	0.0965	0.5348	0.047	0.11	0.05	0.09	0.53	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.400366	NA	NA	NA	NA	NA	0.174	NA	3.8807
1264	20	57564448	57564448	C	T	intronic	NELFCD	NA	NA	NA	intronic	ENSG00000101158	NA	NA	NA	NA	NA	20q13.32	NA	NA	NA	NA	rs12479566	0.13	0.13	0.111	0.133586	0.1193	0.1359	0.1772	0.1089	0.1483	0.12	0.12	0.17	0.11	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.451432	NA	NA	NA	NA	NA	0.109	NA	3.8807
1264	21	35742722	35742722	C	T	intronic	KCNE2	NA	NA	NA	intronic	ENSG00000159197	NA	NA	NA	NA	NA	21q22.11	NA	NA	NA	NA	rs9305548	0.23	0.23	0.249	0.286941	0.1193	0.2232	0.1628	0.4977	0.3282	0.12	0.21	0.17	0.48	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.027627	NA	NA	NA	NA	NA	0.246	NA	3.8807
1264	14	78187032	78187032	T	C	intronic	SNW1	NA	NA	NA	UTR3	ENSG00000119705	ENST00000557623:c.*141T>C	NA	NA	NA	NA	14q24.3	NA	NA	NA	NA	rs45611739	0.1	0.1	0.097	0.0992412	0.1024	0.006	0.0692	0.2171	0.0542	0.11	NA	0.08	0.21	0.0912	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.585993	NA	NA	0.092558	0.210849	NA	0.101	NA	3.8805087
1264	2	206605223	206605223	T	C	intronic	NRP2	NA	NA	NA	intronic	ENSG00000118257	NA	NA	NA	NA	NA	2q33.3	NA	NA	NA	NA	rs77781102	0.02	0.02	0.027	0.0161741	0.0477	NA	0.0303	0.0038	0.0072	0.05	NA	0.04	0.0041	0.0282	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.156146	NA	NA	0.043605	0.011348	NA	0.022	NA	3.880495
1264	19	48591898	48591898	G	A	intronic	PLA2G4C	NA	NA	NA	intronic	ENSG00000105499	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs11564555	0.04	0.04	0.022	0.0397364	0.0477	0.006	0.1441	0.0257	0.0112	0.06	0.0017	0.08	0.03	0.0466	0.087	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.980354	NA	NA	0.025233	0.0202	NA	0.058	NA	3.880467
1264	15	40758337	40758337	A	C	UTR3	BAHD1	NM_014952:c.*8A>C	NA	NA	ncRNA_UTR3	ENSG00000140320	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs3743145	0.13	0.13	0.126	0.124601	0.2276	0.0685	0.1326	0.0204	0.2117	0.22	0.09	0.16	0.02	0.1761	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.574212	NA	NA	0.216163	0.063777	NA	0.065	NA	3.880137
1264	14	81448382	81448382	T	G	intronic	TSHR	NA	NA	NA	ncRNA_exonic	ENSG00000258915	NA	NA	NA	NA	NA	14q31.1	NA	NA	NA	NA	rs3783949	0.52	0.52	0.499	0.505591	0.4533	0.5982	0.5519	0.4342	0.5276	0.45	0.62	0.54	0.48	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.178505	NA	NA	NA	NA	NA	0.507	NA	3.8800333
1264	18	61022556	61022556	C	T	intronic	KDSR	NA	NA	NA	intronic	ENSG00000119537	NA	NA	NA	NA	NA	18q21.33	NA	NA	NA	NA	rs72946535	0.02	0.02	0.014	0.0131789	0.0437	NA	0.0216	0.0023	0.0041	0.04	NA	0.03	0.002	0.029	0.047	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.024245	NA	NA	0.047326	0.011121	NA	0.036	NA	3.879974
1264	6	124604038	124604038	T	C	intronic	NKAIN2	NA	NA	NA	intronic	ENSG00000188580	NA	NA	NA	NA	NA	6q22.31	NA	NA	NA	NA	rs41284438	0.17	0.17	0.179	0.154553	0.1203	0.2728	0.0749	0.1657	0.1094	0.12	0.29	0.09	0.17	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.241551	NA	NA	NA	NA	NA	0.072	NA	3.8797
1264	7	30702244	30702244	C	T	intronic	CRHR2	NA	NA	NA	intronic	ENSG00000106113	NA	NA	NA	NA	NA	7p14.3	NA	NA	NA	NA	rs2270008	0.17	0.17	0.183	0.211262	0.1203	0.1696	0.1311	0.3457	0.2229	0.1	0.15	0.14	0.31	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.637467	NA	NA	NA	NA	NA	0.29	NA	3.8797
1264	7	43827771	43827771	C	T	intronic	BLVRA	NA	NA	NA	intronic	ENSG00000106605	NA	NA	NA	NA	NA	7p13	NA	NA	NA	NA	rs2074795	0.1	0.1	0.073	0.0816693	0.1203	0.0804	0.1657	0.0227	0.0634	0.12	0.1	0.15	0.02	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.382376	NA	NA	NA	NA	NA	0.058	NA	3.8797
1264	12	118509347	118509347	T	C	intronic	VSIG10	NA	NA	NA	intronic	ENSG00000176834	NA	NA	NA	NA	NA	12q24.23	NA	NA	NA	NA	rs9669474	0.22	0.22	0.209	0.235024	0.1203	0.2659	0.2493	0.3797	0.1155	0.11	0.24	0.22	0.37	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.130051	NA	NA	NA	NA	NA	0.29	NA	3.8797
1264	14	39870296	39870296	T	C	intronic	FBXO33	NA	NA	NA	intronic	ENSG00000165355	NA	NA	NA	NA	NA	14q21.1	NA	NA	NA	NA	rs10146622	0.08	0.08	0.075	0.0860623	0.1203	0.0724	0.062	0.0174	0.1748	0.13	0.08	0.06	0.02	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.891601	NA	NA	NA	NA	NA	0.08	NA	3.8797
1264	17	12897669	12897669	C	T	intronic	ELAC2	NA	NA	NA	intronic	ENSG00000006744	NA	NA	NA	NA	NA	17p12	NA	NA	NA	NA	rs56329828	0.05	0.05	0.064	0.0499201	0.1203	0.001	0.0793	0.0053	0.0675	0.11	NA	0.07	0.01	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.967436	NA	NA	NA	NA	NA	0.058	NA	3.8797
1264	17	12908247	12908247	T	A	intronic	ELAC2	NA	NA	NA	intronic	ENSG00000006744	NA	NA	NA	NA	NA	17p12	NA	NA	NA	NA	rs17639379	0.05	0.05	0.053	0.0495208	0.1203	0.001	0.0764	0.0053	0.0675	0.11	NA	0.07	0.01	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.005239	NA	NA	NA	NA	NA	0.058	NA	3.8797
1264	19	16035474	16035474	C	T	intronic	CYP4F11	NA	NA	NA	intronic	ENSG00000171903	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs3746153	0.14	0.14	0.122	0.184505	0.1203	0.1558	0.1427	0.1808	0.3149	0.12	0.13	0.15	0.18	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.545253	NA	NA	NA	NA	NA	0.072	NA	3.8797
1264	19	55209385	55209385	G	C	intergenic	LILRB4,LILRP2	dist=29539;dist=10216	NA	NA	ncRNA_intronic	ENSG00000186152	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs8105212	0.14	0.14	0.136	0.138379	0.1203	0.127	0.1772	0.1467	0.1299	0.12	0.13	0.18	0.14	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.042838	NA	NA	NA	NA	NA	0.08	NA	3.8797
1264	21	42719137	42719137	C	A	intronic	FAM3B	NA	NA	NA	intronic	ENSG00000183844	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs11701669	0.11	0.11	0.085	0.096845	0.1203	0.0843	0.1729	0.0681	0.0706	0.12	0.08	0.17	0.08	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.608128	NA	NA	NA	NA	NA	0.138	NA	3.8797
1264	8	142222374	142222374	A	G	exonic	SLC45A4	NA	synonymous SNV	SLC45A4:NM_001080431:exon7:c.T2070C:p.G690G	exonic	ENSG00000022567	NA	synonymous SNV	ENSG00000022567:ENST00000024061:exon7:c.T2070C:p.G690G,ENSG00000022567:ENST00000433583:exon7:c.T2049C:p.G683G,ENSG00000022567:ENST00000517878:exon7:c.T2223C:p.G741G,ENSG00000022567:ENST00000519067:exon7:c.T2070C:p.G690G	NA	NA	8q24.3	NA	NA	NA	NA	rs7017848	0.68	0.68	0.618	0.686502	0.5905	0.8036	0.5764	0.7542	0.6513	0.57	0.8	0.64	0.76	0.6283	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.101571	NA	NA	0.568488	0.763289	NA	0.594	NA	3.8793786
1264	3	158386737	158386737	C	T	intronic	GFM1,LXN	NA	NA	NA	intronic	ENSG00000079257,ENSG00000168827	NA	NA	NA	NA	NA	3q25.32	NA	Name=Pol2	NA	NA	rs1492909	0.37	0.37	0.377	0.409145	0.3847	0.1855	0.3386	0.6392	0.4039	0.39	0.16	0.32	0.62	0.3649	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.326158	NA	NA	0.371352	0.570602	NA	0.464	NA	3.879048
1264	22	20031016	20031016	G	C	intronic	TANGO2	NA	NA	NA	intronic	ENSG00000183597	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs45548038	0.03	0.03	0.031	0.0317492	0.0437	0.0665	0.0043	0.0015	0.044	0.05	0.05	0.01	0.0041	0.0375	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.344864	NA	NA	0.039884	0.008625	NA	0.022	NA	3.878916
1264	9	131586318	131586318	C	T	intronic	C9orf114	NA	NA	NA	intronic	ENSG00000198917	NA	NA	NA	NA	NA	9q34.11	NA	NA	NA	NA	rs41275922	0.06	0.06	0.047	0.057508	0.0398	0.0526	0.0403	0.1021	0.0327	0.04	0.06	0.05	0.11	0.0443	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.391266	NA	NA	0.037093	0.079473	NA	0.072	NA	3.878807
1264	6	42823529	42823529	C	T	intronic	GLTSCR1L	NA	NA	NA	intronic	ENSG00000112624	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs9381223	0.13	0.13	0.132	0.149361	0.0656	0.0694	0.085	0.3495	0.093	0.06	0.07	0.09	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.369089	NA	NA	0.055625	0.282514	NA	0.138	NA	3.878775
1264	1	10412636	10412636	A	T	intronic	KIF1B	NA	NA	NA	intronic	ENSG00000054523	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs4846215	0.11	0.11	0.125	0.136581	0.1213	0.0129	0.1124	0.2141	0.1922	0.12	0.01	0.11	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.639533	NA	NA	NA	NA	NA	0.174	NA	3.8787
1264	1	10431132	10431132	C	T	intronic	KIF1B	NA	NA	NA	intronic	ENSG00000054523	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs12141192	0.11	0.11	0.126	0.13758	0.1213	0.0129	0.1124	0.2118	0.2004	0.12	0.01	0.11	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.638739	NA	NA	NA	NA	NA	0.174	NA	3.8787
1264	2	74597527	74597527	G	A	intronic	DCTN1	NA	NA	NA	intronic	ENSG00000204843	NA	NA	NA	NA	NA	2p13.1	NA	NA	NA	NA	rs740277	0.2	0.2	0.21	0.198283	0.1213	0.4216	0.1282	0.112	0.2137	0.12	0.45	0.13	0.09	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.747773	NA	NA	NA	NA	NA	0.145	NA	3.8787
1264	5	179546264	179546264	A	C	intronic	RASGEF1C	NA	NA	NA	intronic	ENSG00000146090	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs36055015	0.07	0.07	0.077	0.0840655	0.1213	0.0119	0.0836	0.0371	0.184	0.13	0.01	0.09	0.03	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.59432	NA	NA	NA	NA	NA	0.043	NA	3.8787
1264	7	102473163	102473163	A	G	intronic	FBXL13	NA	NA	NA	intronic	ENSG00000161040	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs4377880	0.07	0.07	0.064	0.0625	0.1213	0.0089	0.0922	0.0484	0.0552	0.13	0.01	0.11	0.04	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.79762	NA	NA	NA	NA	NA	0.087	NA	3.8787
1264	8	105404863	105404863	T	C	intronic	DPYS	NA	NA	NA	intronic	ENSG00000147647	NA	NA	NA	NA	NA	8q22.3	NA	NA	NA	NA	rs12675680	0.24	0.24	0.237	0.261781	0.1213	0.38	0.1225	0.3434	0.273	0.12	0.41	0.12	0.32	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.73204	NA	NA	NA	NA	NA	0.188	NA	3.8787
1264	9	80921145	80921145	C	T	intronic	PSAT1	NA	NA	NA	intronic	ENSG00000135069	NA	NA	NA	NA	NA	9q21.2	NA	NA	NA	NA	rs41277899	0.09	0.09	0.076	0.086262	0.1213	0.0099	0.0922	0.0946	0.1135	0.13	0.01	0.09	0.1	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.883474	NA	NA	NA	NA	NA	0.087	NA	3.8787
1264	9	95030690	95030690	T	C	intronic	IARS	NA	NA	NA	intronic	ENSG00000196305	NA	NA	NA	NA	NA	9q22.31	NA	NA	NA	NA	rs2295939	0.1	0.1	0.097	0.120208	0.1213	0.0704	0.1614	0.0469	0.2403	0.13	0.08	0.14	0.04	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.245174	NA	NA	NA	NA	NA	0.101	NA	3.8787
1264	10	13852967	13852967	A	T	intronic	FRMD4A	NA	NA	NA	intronic	ENSG00000151474	NA	NA	NA	NA	NA	10p13	NA	NA	NA	NA	rs77883999	0.06	0.06	0.053	0.0339457	0.1213	NA	0.0418	0.0068	0.0102	0.14	NA	0.06	0.01	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.278785	NA	NA	NA	NA	NA	0.036	NA	3.8787
1264	12	39979839	39979839	T	C	intronic	ABCD2	NA	NA	NA	intronic	ENSG00000173208	NA	NA	NA	NA	NA	12q12	NA	NA	NA	NA	rs11172692	0.12	0.12	0.112	0.122804	0.1213	0.1419	0.0648	0.1369	0.1268	0.11	0.13	0.07	0.15	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.791818	NA	NA	NA	NA	NA	0.08	NA	3.8787
1264	5	169463466	169463466	G	T	intronic	DOCK2	NA	NA	NA	intronic	ENSG00000134516	NA	NA	NA	NA	NA	5q35.1	NA	NA	NA	NA	rs6863396	0.09	0.09	0.106	0.116414	0.0656	0.0734	0.0548	0.143	0.2209	0.06	0.08	0.04	0.17	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.685927	NA	NA	0.05594	0.132948	NA	0.13	NA	3.87846
1264	11	27393813	27393813	G	A	intronic	LGR4	NA	NA	NA	intronic	ENSG00000205213	NA	NA	NA	NA	NA	11p14.1	NA	Name=GATA-1,p300_(F-4),c-Jun,GATA-2,TAL1_(SC-12984),eGFP-GATA2	NA	NA	rs2448001	0.39	0.39	0.396	0.417532	0.3678	0.4504	0.2709	0.4894	0.4417	0.36	0.41	0.28	0.52	0.3868	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.269295	NA	NA	0.367062	0.442552	NA	0.529	NA	3.878338
1264	22	16873122	16873122	T	G	intergenic	OR11H1,CCT8L2	dist=423318;dist=198526	NA	NA	intergenic	ENSG00000225293,ENSG00000226160	dist=1509;dist=12934	NA	NA	NA	NA	22q11.1	NA	Name=E2F6_(H-50)	NA	NA	rs131549	0.44	0.44	0.347	0.479233	0.4553	0.5972	0.5317	0.292	0.5982	0.42	0.56	0.5	0.3	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.443663	NA	NA	NA	NA	NA	0.007	NA	3.8780334
1264	6	29911367	29911367	G	A	intronic	HLA-A	NA	NA	NA	intronic	ENSG00000206503	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs79412932	0.11	0.11	0.119	NA	NA	NA	NA	NA	NA	0.15	0.04	0.09	0.17	0.1222	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.371662	NA	NA	NA	NA	NA	NA	NA	3.8778
1264	1	10386506	10386506	T	C	intronic	KIF1B	NA	NA	NA	intronic	ENSG00000054523	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs12135774	0.11	0.11	0.121	0.138179	0.1223	0.0218	0.111	0.211	0.1953	0.13	0.01	0.1	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.920302	NA	NA	NA	NA	NA	0.174	NA	3.8777
1264	2	42552284	42552284	G	C	intronic	EML4	NA	NA	NA	intronic	ENSG00000143924	NA	NA	NA	NA	NA	2p21	NA	NA	NA	NA	rs56315033	0.15	0.15	0.173	0.179513	0.1223	0.001	0.1037	0.3782	0.2076	0.13	NA	0.11	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.951973	NA	NA	NA	NA	NA	0.159	NA	3.8777
1264	8	41591643	41591643	C	T	intronic	ANK1	NA	NA	NA	intronic	ENSG00000029534	NA	NA	NA	NA	NA	8p11.21	NA	NA	NA	NA	rs2304869	0.11	0.11	0.108	0.108626	0.1223	0.1548	0.098	0.0333	0.1564	0.12	0.16	0.13	0.03	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.880081	1.880081	NA	NA	NA	NA	0.072	NA	3.8777
1264	14	103405852	103405852	G	C	intronic	CDC42BPB	NA	NA	NA	intronic	ENSG00000198752	NA	NA	NA	NA	NA	14q32.32	NA	NA	NA	NA	rs77448485	0.06	0.06	0.069	0.0543131	0.1223	0.001	0.0951	0.0257	0.0491	0.11	0.0017	0.1	0.03	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.473183	NA	NA	NA	NA	NA	0.058	NA	3.8777
1264	15	69553728	69553728	C	A	intronic	GLCE	NA	NA	NA	intronic	ENSG00000138604	NA	NA	NA	NA	NA	15q23	NA	NA	NA	NA	rs8023271	0.14	0.14	0.114	0.125399	0.1223	0.1577	0.0922	0.1362	0.1043	0.14	0.17	0.09	0.14	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.877668	NA	NA	NA	NA	ID=COSN164983;OCCURENCE=1(breast)	0.13	NA	3.8777
1264	15	75142761	75142761	T	G	intronic	SCAMP2	NA	NA	NA	intronic	ENSG00000140497	NA	NA	NA	NA	NA	15q24.1	NA	NA	NA	NA	rs2305668	0.14	0.14	0.128	0.131789	0.1223	0.246	0.1282	0.0469	0.1411	0.12	0.26	0.1	0.04	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.446125	NA	NA	NA	NA	NA	0.116	NA	3.8777
1264	2	58390547	58390547	G	A	intronic	FANCL	NA	NA	NA	UTR3	ENSG00000115392	ENST00000540646:c.*247C>T	NA	NA	NA	NA	2p16.1	NA	NA	NA	NA	rs10445896	0.12	0.12	0.139	0.120407	0.0905	0.0169	0.0937	0.3018	0.0317	0.08	0.02	0.09	0.33	0.0977	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.042756	NA	NA	0.100814	0.262596	NA	0.181	NA	3.8776527
1264	7	131864407	131864407	G	A	intronic	PLXNA4	NA	NA	NA	intronic	ENSG00000221866	NA	NA	NA	NA	NA	7q32.3	NA	NA	NA	NA	rs3734990	0.11	0.11	0.101	0.11242	0.0348	0.0526	0.0461	0.3253	0.0133	0.03	0.05	0.04	0.35	0.0543	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.973676	NA	0	0.033721	0.277576	NA	0.051	NA	3.877179
1264	1	53538669	53538669	G	A	intronic	PODN	NA	NA	NA	ncRNA_intronic	ENSG00000232993	NA	NA	NA	NA	NA	1p32.3	NA	NA	NA	NA	rs12145611	0.22	0.22	0.183	0.214657	0.4563	0.0159	0.2421	0.0393	0.3885	0.46	0.01	0.29	0.05	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.747972	NA	NA	NA	NA	NA	0.116	NA	3.8770333
1264	5	147499616	147499616	C	T	exonic	SPINK5	NA	synonymous SNV	SPINK5:NM_001127698:exon25:c.C2358T:p.L786L,SPINK5:NM_001127699:exon25:c.C2358T:p.L786L,SPINK5:NM_006846:exon25:c.C2358T:p.L786L	exonic	ENSG00000133710	NA	synonymous SNV	ENSG00000133710:ENST00000256084:exon25:c.C2358T:p.L786L,ENSG00000133710:ENST00000359874:exon25:c.C2358T:p.L786L,ENSG00000133710:ENST00000398454:exon25:c.C2358T:p.L786L,ENSG00000133710:ENST00000508733:exon25:c.C2301T:p.L767L	NA	NA	5q32	NA	NA	NA	NA	rs17704908	0.49	0.49	0.463	0.48742	0.5915	0.4821	0.6311	0.3139	0.5184	0.56	0.46	0.59	0.36	0.5829	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.488677	NA	NA	0.615413	0.373308	NA	0.471	NA	3.8768536
1264	11	119291688	119291688	A	G	ncRNA_intronic	LOC100499227	NA	NA	NA	ncRNA_intronic	ENSG00000245248	NA	NA	NA	NA	NA	11q23.3	NA	Name=Pol2,Pol2-4H8	NA	NA	rs3751026	0.91	0.91	0.891	0.914137	0.8857	0.9583	0.9337	0.8812	0.9284	0.89	0.97	0.94	0.87	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.114337	NA	NA	0.904148	0.883671	NA	0.819	NA	3.8768186
1264	5	80655709	80655709	T	C	ncRNA_intronic	RNU5D-1,RNU5E-1	NA	NA	NA	UTR3	ENSG00000172497	ENST00000513751:c.*5A>G	NA	NA	NA	NA	5q14.1	NA	NA	NA	NA	rs13163821	0.14	0.14	0.107	0.114816	0.2356	0.0635	0.1715	0.0219	0.1288	0.23	0.08	0.19	0.02	0.1709	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.500984	NA	NA	0.216729	0.058155	NA	0.058	NA	3.876771
1264	2	85628556	85628556	A	G	intronic	CAPG	NA	NA	NA	intronic	ENSG00000042493	NA	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs2002444	0.08	0.08	0.084	0.0794728	0.1233	0.0159	0.0821	0.0832	0.093	0.12	0.01	0.09	0.09	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.715937	1.715937	NA	NA	NA	NA	0.065	NA	3.8767
1264	14	39681157	39681157	C	T	intergenic	PNN,MIA2	dist=28735;dist=21968	NA	NA	ncRNA_exonic	ENSG00000258671	NA	NA	NA	NA	NA	14q21.1	NA	NA	NA	NA	rs10138869	0.24	0.24	0.214	0.207468	0.1233	0.4484	0.1282	0.1944	0.1196	0.12	0.47	0.15	0.21	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.16415	NA	NA	NA	NA	NA	0.109	NA	3.8767
1264	16	28596884	28596884	G	A	intronic	CCDC101	NA	NA	NA	intronic	ENSG00000176476	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs10521145	0.08	0.08	0.082	0.0770767	0.1233	0.004	0.1023	0.0787	0.0849	0.11	0.01	0.12	0.1	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.82387	NA	NA	NA	NA	NA	0.072	NA	3.8767
1264	18	55247118	55247118	C	T	intronic	FECH	NA	NA	NA	intronic	ENSG00000066926	NA	NA	NA	NA	NA	18q21.31	NA	NA	NA	NA	rs71355630	0.07	0.07	0.077	0.0613019	0.1233	NA	0.0778	0.087	0.0143	0.13	NA	0.08	0.07	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.818257	NA	NA	NA	NA	NA	0.058	NA	3.8767
1264	19	10096681	10096681	G	A	intronic	COL5A3	NA	NA	NA	intronic	ENSG00000080573	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs11670525	0.16	0.16	NA	0.178514	0.1233	0.0833	0.1268	0.3533	0.1339	0.12	0.08	0.13	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.522011	NA	NA	NA	NA	NA	0.058	NA	3.8767
1264	14	93428802	93428802	T	A	intronic	ITPK1	NA	NA	NA	intronic	ENSG00000100605	NA	NA	NA	NA	NA	14q32.12	NA	NA	NA	NA	rs2295393	0.08	0.08	0.081	0.0930511	0.0616	0.1915	0.0418	0.0333	0.1411	0.05	0.18	0.05	0.03	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.781101	NA	NA	0.061911	0.03974	NA	0.043	NA	3.876489
1264	5	32000397	32000397	T	C	intronic	PDZD2	NA	NA	NA	intronic	ENSG00000133401	NA	NA	NA	NA	NA	5p13.3	NA	NA	NA	NA	rs115911339	0.03	0.03	0.019	0.0225639	0.0408	0.0228	0.036	0.0045	0.0184	0.05	0.02	0.05	0.002	0.0378	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.18106	NA	NA	0.045116	0.008625	NA	0.014	NA	3.876284
1264	13	25887738	25887738	C	T	intronic	NUPL1	NA	NA	NA	intronic	ENSG00000139496	NA	NA	NA	NA	NA	13q12.13	NA	NA	NA	NA	rs12866994	0.02	0.02	0.02	0.014976	0.0507	0.001	0.0101	0.0061	0.0082	0.05	NA	0.01	0.01	0.0298	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.015812	NA	NA	0.043372	0.007717	NA	0.007	NA	3.876128
1264	22	37627246	37627246	G	C	intronic	RAC2	NA	NA	NA	intronic	ENSG00000128340	NA	NA	NA	NA	NA	22q13.1	NA	NA	Name=7	NA	rs9610683	0.39	0.39	0.394	0.383387	0.3807	0.3185	0.3357	0.5303	0.2883	0.38	0.29	0.34	0.57	0.3649	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.994497	NA	NA	0.378488	0.496596	NA	0.362	NA	3.875912
1264	8	145012777	145012777	C	G	intronic	PLEC	NA	NA	NA	intronic	ENSG00000178209	NA	NA	NA	NA	NA	8q24.3	NA	NA	Name=17	NA	rs7823393	0.24	0.24	0.223	0.230431	0.4056	0.1349	0.2896	0.0598	0.3374	0.4	0.15	0.29	0.07	0.3289	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.716476	NA	NA	0.389767	0.107905	ID=COSN168454;OCCURENCE=1(large_intestine)	0.297	NA	3.875733
1264	2	46807991	46807991	T	C	intronic	RHOQ	NA	NA	NA	intronic	ENSG00000119729	NA	NA	NA	NA	NA	2p21	NA	NA	NA	NA	rs2276554	0.18	0.18	0.181	0.233227	0.1243	0.0456	0.1297	0.5106	0.2372	0.12	0.05	0.13	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.142404	NA	NA	NA	NA	NA	0.326	NA	3.8757
1264	3	183796081	183796081	G	A	intergenic	HTR3C,HTR3E	dist=17620;dist=18771	NA	NA	ncRNA_intronic	ENSG00000233576	NA	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs9874060	0.14	0.14	0.154	0.154353	0.1243	0.0169	0.0965	0.326	0.136	0.13	0.02	0.1	0.34	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.707374	NA	NA	NA	NA	NA	0.152	NA	3.8757
1264	4	2179086	2179086	T	C	intronic	POLN	NA	NA	NA	intronic	ENSG00000130997	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs6816862	0.31	0.31	0.311	0.321885	0.1243	0.373	0.2435	0.5703	0.1922	0.13	0.37	0.25	0.57	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.817162	NA	NA	NA	NA	NA	0.384	NA	3.8757
1264	5	49929456	49929456	G	A	intergenic	EMB,PARP8	dist=192222;dist=32277	NA	NA	downstream	ENSG00000213956	NA	NA	NA	Score=488;Name=lod=128	NA	5q11.1	NA	NA	NA	NA	rs28690842	0.53	0.53	0.496	0.485423	0.6243	0.6677	0.5821	0.2292	0.4325	0.62	0.65	0.59	0.22	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.148811	NA	NA	NA	NA	NA	0.275	NA	3.8757
1264	9	137582999	137582999	A	G	intronic	COL5A1	NA	NA	NA	intronic	ENSG00000130635	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs12551860	0.1	0.1	0.06	0.0988419	0.1243	0.0873	0.147	0.0272	0.1472	0.14	0.09	0.13	0.03	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.467395	NA	NA	NA	NA	NA	0.036	NA	3.8757
1264	11	18994249	18994249	C	T	intergenic	MRGPRX1,MRGPRX2	dist=37700;dist=81754	NA	NA	ncRNA_exonic	ENSG00000254720	NA	NA	NA	NA	NA	11p15.1	NA	NA	NA	NA	rs17496620	0.06	0.06	0.061	0.0459265	0.1243	NA	0.0764	0.0272	0.0164	0.12	NA	0.09	0.03	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.628833	NA	1	NA	NA	NA	0.014	NA	3.8757
1264	5	146971279	146971279	A	G	ncRNA_intronic	JAKMIP2-AS1	NA	NA	NA	intronic	ENSG00000176049	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs77301397	0.13	0.13	0.115	0.153355	0.1561	0.2073	0.2176	0.0053	0.2495	0.14	0.19	0.17	0.02	0.1698	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.167264	NA	NA	0.131805	0.027248	NA	0.159	NA	3.8756283
1264	8	76463755	76463755	C	A	intronic	HNF4G	NA	NA	NA	intronic	ENSG00000164749	NA	NA	NA	NA	NA	8q21.11	NA	NA	NA	NA	rs1800923	0.02	0.02	0.011	0.0191693	0.0408	NA	0.0231	0.0015	0.0378	0.04	NA	0.02	NA	0.0361	0.048	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.208281	NA	NA	0.047558	0.007263	NA	0.043	NA	3.875542
1264	22	37627234	37627234	T	C	intronic	RAC2	NA	NA	NA	intronic	ENSG00000128340	NA	NA	NA	NA	NA	22q13.1	NA	NA	Name=7	NA	rs9610682	0.39	0.39	0.402	0.389577	0.3807	0.3185	0.3357	0.5537	0.2883	0.38	0.29	0.34	0.58	0.3662	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.269149	NA	NA	0.378023	0.51793	NA	0.37	NA	3.875077
1265	20	10026357	10026357	T	C	ncRNA_intronic	SNAP25-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000227906	NA	NA	NA	NA	NA	20p12.2	NA	NA	NA	NA	rs685723	0.19	0.19	0.191	0.208466	0.2763	0.006	0.1628	0.3048	0.2495	0.27	0.01	0.19	0.27	0.2349	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.314885	2.314885	NA	0.280581	0.29596	NA	0.196	NA	3.8748856
1265	5	178770759	178770759	C	G	intronic	ADAMTS2	NA	NA	NA	intronic	ENSG00000087116	NA	NA	NA	NA	NA	5q35.3	NA	NA	Name=3	NA	rs2271213	0.39	0.39	0.335	0.395367	0.3827	0.5129	0.4251	0.1982	0.5327	0.39	0.51	0.4	0.24	0.415	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.006779	2.006779	NA	0.327442	0.200663	NA	0.435	NA	3.874858
1265	1	203807273	203807273	A	G	intronic	ZC3H11A	NA	NA	NA	intronic	ENSG00000058673	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs34947847	0.06	0.06	0.056	0.0565096	0.1252	0.002	0.0476	0.0325	0.0808	0.12	0.0035	0.07	0.03	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.056533	NA	NA	NA	NA	NA	0.029	NA	3.8748
1265	1	203817620	203817620	G	C	intronic	ZC3H11A	NA	NA	NA	intronic	ENSG00000058673	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs12078932	0.08	0.08	0.074	0.0694888	0.1252	0.0357	0.0519	0.0492	0.0869	0.12	0.04	0.08	0.04	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.33607	NA	NA	NA	NA	ID=COSN163400;OCCURENCE=1(NS)	0.051	NA	3.8748
1265	2	165378427	165378427	C	A	intronic	GRB14	NA	NA	NA	intronic	ENSG00000115290	NA	NA	NA	NA	NA	2q24.3	NA	NA	NA	NA	rs13015232	0.09	0.09	0.077	0.0952476	0.1252	0.0407	0.1974	0.0492	0.1104	0.13	0.04	0.16	0.05	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.678407	NA	NA	NA	NA	NA	0.116	NA	3.8748
1265	3	111263826	111263826	G	A	intronic	CD96	NA	NA	NA	intronic	ENSG00000153283	NA	NA	NA	NA	NA	3q13.13	NA	NA	NA	NA	rs1513325	0.09	0.09	0.084	0.0830671	0.1252	0.0377	0.0591	0.1271	0.044	0.12	0.03	0.06	0.12	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.472783	NA	NA	NA	NA	NA	0.196	NA	3.8748
1265	5	14474283	14474283	G	A	intronic	TRIO	NA	NA	NA	intronic	ENSG00000038382	NA	NA	NA	NA	NA	5p15.2	NA	NA	NA	NA	rs11749307	0.06	0.06	0.048	0.0435304	0.1252	0.001	0.0735	0.0045	0.0348	0.13	NA	0.1	0.01	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.022083	NA	NA	NA	NA	NA	0.036	NA	3.8748
1265	7	29736553	29736553	A	G	intergenic	DPY19L2P3,WIPF3	dist=8694;dist=109617	NA	NA	ncRNA_intronic	ENSG00000227855	NA	NA	NA	NA	NA	7p14.3	NA	NA	NA	NA	rs56078668	0.09	0.09	0.075	0.10004	0.1252	0.003	0.2032	0.1074	0.091	0.13	0.0017	0.17	0.08	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.030815	NA	NA	NA	NA	NA	0.167	NA	3.8748
1265	11	93808619	93808619	C	T	intronic	HEPHL1	NA	NA	NA	intronic	ENSG00000181333	NA	NA	NA	NA	NA	11q21	NA	NA	NA	NA	rs4753123	0.17	0.17	0.166	0.166534	0.1252	0.1835	0.1715	0.1952	0.1493	0.12	0.2	0.15	0.23	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.216577	NA	NA	NA	NA	NA	0.159	NA	3.8748
1265	16	77355179	77355179	C	G	intronic	ADAMTS18	NA	NA	NA	intronic	ENSG00000140873	NA	NA	NA	NA	NA	16q23.1	NA	NA	NA	NA	rs77699980	0.12	0.12	0.121	0.10623	0.1252	0.256	0.049	0.003	0.1125	0.13	0.24	0.07	0.002	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.060577	NA	NA	NA	NA	NA	0.043	NA	3.8748
1265	16	77356115	77356115	G	C	intronic	ADAMTS18	NA	NA	NA	intronic	ENSG00000140873	NA	NA	NA	NA	NA	16q23.1	NA	NA	NA	NA	rs74643232	0.12	0.12	0.118	0.10603	0.1252	0.256	0.049	0.003	0.1115	0.13	0.23	0.07	0.002	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.098873	NA	NA	NA	NA	NA	0.043	NA	3.8748
1265	20	48098402	48098402	G	A	intronic	KCNB1	NA	NA	NA	intronic	ENSG00000158445	NA	NA	NA	NA	NA	20q13.13	NA	NA	NA	NA	rs35235111	0.02	0.02	0.01	0.0231629	0.0427	0.002	0.0533	0.0023	0.0317	0.04	0.0035	0.04	0.002	0.0367	0.046	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.701714	NA	NA	0.045814	0.010213	NA	0.007	NA	3.874786
1265	2	86360573	86360573	T	G	intronic	PTCD3	NA	NA	NA	intronic	ENSG00000132300	NA	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs2241437	0.07	0.07	0.063	0.0611022	0.0398	0.2262	0.0274	0.0023	0.0164	0.04	0.21	0.03	0.002	0.044	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.670753	NA	NA	0.041628	0.007717	NA	0.029	NA	3.874572
1265	16	57946937	57946937	A	T	intronic	CNGB1	NA	NA	NA	intronic	ENSG00000070729	NA	NA	NA	NA	NA	16q21	NA	NA	NA	NA	rs8044629	0.17	0.17	0.187	0.18131	0.0338	0.0714	0.0836	0.5303	0.044	0.03	0.08	0.09	0.55	0.0713	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.446028	NA	NA	0.02046	0.419248	NA	0.239	NA	3.87444
1265	16	341182	341182	G	A	intronic	AXIN1	NA	NA	NA	intronic	ENSG00000103126	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs118063900	0.02	0.02	0.021	0.0133786	0.0507	NA	0.0144	NA	0.0061	0.06	NA	0.01	NA	0.0449	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.330064	NA	NA	0.030037	0.006431	NA	NA	NA	3.874363
1265	9	79325558	79325558	G	C	exonic	PRUNE2	NA	synonymous SNV	PRUNE2:NM_015225:exon8:c.C1632G:p.T544T	exonic	ENSG00000106772	NA	synonymous SNV	ENSG00000106772:ENST00000376718:exon8:c.C1632G:p.T544T,ENSG00000106772:ENST00000428286:exon8:c.C555G:p.T185T	NA	NA	9q21.2	NA	NA	NA	NA	rs600859	0.49	0.49	0.456	0.483027	0.5974	0.4504	0.6383	0.2708	0.5757	0.58	0.46	0.64	0.29	0.5785	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.452976	NA	NA	0.616415	0.348214	NA	0.5	NA	3.8743516
1265	4	145040784	145040784	T	C	intronic	GYPA	NA	NA	NA	ncRNA_intronic	ENSG00000248828	NA	NA	NA	NA	NA	4q31.21	NA	NA	NA	NA	rs62334651	0.38	0.38	0.299	0.402556	0.4592	0.4653	0.4885	0.1823	0.5164	0.44	0.41	0.47	0.17	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.302018	NA	NA	NA	NA	NA	0.138	NA	3.8741333
1265	17	73502636	73502636	T	C	intronic	CASKIN2	NA	NA	NA	intronic	ENSG00000177303	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs115438731	0.06	0.06	0.052	0.0601038	0.0437	0.0288	0.0303	0.143	0.0184	0.04	0.02	0.04	0.13	0.0433	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.512527	NA	NA	0.038953	0.118021	NA	0.029	NA	3.874047
1265	9	131735559	131735559	T	C	intronic	NUP188	NA	NA	NA	intronic	ENSG00000095319	NA	NA	NA	NA	NA	9q34.11	NA	Name=c-Fos	NA	NA	rs17452428	0.27	0.27	0.236	0.255391	0.4076	0.1756	0.4006	0.0862	0.3067	0.41	0.16	0.39	0.11	0.343	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.293626	NA	NA	0.375465	0.121425	NA	0.341	NA	3.873935
1265	1	26547043	26547043	G	A	intergenic	CATSPER4,CEP85	dist=18010;dist=13650	NA	NA	ncRNA_intronic	ENSG00000236155	NA	NA	NA	NA	NA	1p36.11	NA	NA	NA	NA	rs59707891	0.1	0.1	0.096	0.116813	0.1262	0.0218	0.0692	0.2247	0.093	0.12	0.02	0.06	0.17	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.756757	NA	NA	NA	NA	NA	0.08	NA	3.8738
1265	1	95363698	95363698	A	G	intronic	CNN3	NA	NA	NA	intronic	ENSG00000117519	NA	NA	NA	NA	NA	1p21.3	NA	NA	NA	NA	rs9432611	0.16	0.16	0.182	0.168331	0.1262	0.129	0.0951	0.2958	0.1319	0.14	0.12	0.09	0.31	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.215661	NA	NA	NA	NA	NA	0.109	NA	3.8738
1265	10	61311293	61311293	T	C	intergenic	FAM13C,SLC16A9	dist=188632;dist=99229	NA	NA	ncRNA_exonic	ENSG00000235469	NA	NA	NA	NA	NA	10q21.2	NA	NA	NA	NA	rs12412495	0.1	0.1	0.106	0.120607	0.1262	0.1567	0.0821	0.0098	0.2546	0.13	0.16	0.08	0.01	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.192165	NA	NA	NA	NA	NA	0.094	NA	3.8738
1265	13	99042158	99042158	G	A	intronic	FARP1	NA	NA	NA	intronic	ENSG00000152767	NA	NA	NA	NA	NA	13q32.2	NA	NA	NA	NA	rs9582224	0.07	0.07	0.068	0.0780751	0.1262	0.0099	0.0591	0.0522	0.1472	0.14	0.0035	0.07	0.05	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.851031	NA	NA	NA	NA	NA	0.043	NA	3.8738
1265	14	81558806	81558806	C	T	intronic	TSHR	NA	NA	NA	intronic	ENSG00000165409	NA	NA	NA	NA	NA	14q31.1	NA	NA	NA	NA	rs2075176	0.29	0.29	0.326	0.29972	0.1262	0.3046	0.1427	0.5953	0.1851	0.12	0.32	0.14	0.62	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.463465	NA	NA	NA	NA	NA	0.268	NA	3.8738
1265	15	79183747	79183747	T	A	intronic	MORF4L1	NA	NA	NA	intronic	ENSG00000185787	NA	NA	NA	NA	NA	15q25.1	NA	NA	NA	NA	rs10519215	0.18	0.18	0.182	0.174521	0.1262	0.254	0.1383	0.2405	0.0787	0.13	0.26	0.13	0.22	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.739087	NA	NA	NA	NA	NA	0.167	NA	3.8738
1265	22	44379822	44379822	T	C	exonic	SAMM50	NA	synonymous SNV	SAMM50:NM_015380:exon12:c.T1017C:p.L339L	exonic	ENSG00000100347	NA	synonymous SNV	ENSG00000100347:ENST00000396202:exon11:c.T387C:p.L129L,ENSG00000100347:ENST00000350028:exon12:c.T1017C:p.L339L	NA	NA	22q13.31	NA	NA	NA	NA	rs10452	0.72	0.72	0.712	0.727636	0.5984	0.8165	0.6254	0.7973	0.7474	0.62	0.84	0.6	0.82	0.6294	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.949367	NA	NA	0.565581	0.758284	NA	0.739	NA	3.8732856
1265	3	119361250	119361250	A	G	UTR3	POPDC2	NM_022135:c.*73T>C	NA	NA	UTR3	ENSG00000121577	ENST00000495362:c.*73T>C,ENST00000341124:c.*285T>C,ENST00000264231:c.*73T>C,ENST00000493094:c.*202T>C	NA	NA	NA	NA	3q13.33	NA	NA	NA	NA	rs8007	0.44	0.44	0.423	0.480831	0.4602	0.3393	0.4813	0.5061	0.6135	0.45	0.35	0.49	0.49	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.810802	NA	NA	NA	NA	NA	0.5	NA	3.8731334
1265	15	49118087	49118087	C	T	UTR3	SHC4	NM_203349:c.*81G>A	NA	NA	UTR3	ENSG00000185634	ENST00000332408:c.*81G>A,ENST00000396535:c.*81G>A,ENST00000537958:c.*81G>A	NA	NA	NA	NA	15q21.1	NA	NA	NA	NA	rs3743292	0.34	0.34	0.34	0.30651	0.4602	0.3165	0.3617	0.1505	0.3098	0.44	0.32	0.41	0.16	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.077854	NA	NA	NA	NA	NA	0.37	NA	3.8731334
1265	4	33012957	33012957	A	G	intergenic	PCDH7,NONE	dist=1864534;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000250076	NA	NA	NA	NA	NA	4p15.1	NA	NA	NA	NA	rs6531315	0.17	0.17	0.186	0.19349	0.1272	0.005	0.1326	0.5083	0.0736	0.11	0.01	0.14	0.48	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.908698	NA	NA	NA	NA	NA	0.232	NA	3.8728
1265	1	1256608	1256608	G	A	intronic	CPSF3L	NA	NA	NA	intronic	ENSG00000127054	NA	NA	NA	NA	NA	1p36.33	NA	NA	NA	NA	rs76947392	0.07	0.07	0.062	0.0393371	0.1272	NA	0.0605	0.0083	0.0164	0.15	NA	0.08	0.01	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.531665	NA	NA	NA	NA	NA	NA	NA	3.8728
1265	1	203800715	203800715	A	G	intronic	ZC3H11A	NA	NA	NA	intronic	ENSG00000058673	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs2275324	0.09	0.09	0.078	0.0898562	0.1272	0.0357	0.0562	0.1225	0.0869	0.13	0.04	0.08	0.09	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.919289	NA	NA	NA	NA	NA	0.058	NA	3.8728
1265	2	238266146	238266146	C	T	intronic	COL6A3	NA	NA	NA	intronic	ENSG00000163359	NA	NA	NA	NA	NA	2q37.3	NA	NA	NA	NA	rs2645777	0.12	0.12	0.117	0.11861	0.1272	0.0605	0.1167	0.1399	0.1421	0.13	0.05	0.14	0.16	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.659037	NA	NA	NA	NA	NA	0.152	NA	3.8728
1265	11	116766899	116766899	T	C	intronic	SIK3	NA	NA	NA	intronic	ENSG00000160584	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs10892044	0.13	0.13	0.131	0.140974	0.1272	0.0437	0.1729	0.2088	0.1411	0.12	0.05	0.17	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.564295	NA	NA	NA	NA	NA	0.043	NA	3.8728
1265	13	101315155	101315155	C	T	intronic	TMTC4	NA	NA	NA	intronic	ENSG00000125247	NA	NA	NA	NA	NA	13q32.3	NA	NA	NA	NA	rs79748265	0.08	0.08	0.067	0.0770767	0.1272	0.0099	0.0893	0.0477	0.1258	0.14	0.01	0.1	0.05	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.372432	NA	NA	NA	NA	NA	0.065	NA	3.8728
1265	19	43439472	43439472	C	G	intronic	PSG7	NA	NA	NA	intronic	ENSG00000221878	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs116927510	0.18	0.18	0.111	0.168131	0.1272	0.3194	0.1744	0.0038	0.272	0.16	0.29	0.15	0.09	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.155452	NA	NA	NA	NA	NA	0.109	NA	3.8728
1265	19	43440003	43440003	C	G	intronic	PSG7	NA	NA	NA	intronic	ENSG00000221878	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs62110917	0.21	0.21	0.182	0.25639	0.1272	0.4236	0.1816	0.1831	0.3691	0.13	0.4	0.12	0.16	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.612392	NA	NA	NA	NA	NA	0.217	NA	3.8728
1265	22	46742486	46742486	T	G	intronic	TRMU	NA	NA	NA	intronic	ENSG00000100416	NA	NA	NA	NA	NA	22q13.31	NA	NA	NA	NA	rs6008769	0.16	0.16	0.185	0.192093	0.0249	0.001	0.0663	0.6505	0.0307	0.02	NA	0.07	0.62	0.0732	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.428153	NA	NA	0.029419	0.563323	NA	0.188	NA	3.872481
1265	17	7690404	7690404	G	A	intronic	DNAH2	NA	NA	NA	UTR3	ENSG00000183914	ENST00000574518:c.*3259G>A	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs72840094	0.17	0.17	0.148	0.132987	0.2942	NA	0.1902	0.0915	0.1196	0.3	NA	0.24	0.1	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.448851	NA	NA	NA	NA	NA	0.217	NA	3.8724667
1265	5	179980527	179980527	A	G	intronic	CNOT6	NA	NA	NA	intronic	ENSG00000113300	NA	NA	NA	NA	NA	5q35.3	NA	Name=eGFP-GATA2,CEBPB,GATA-1,eGFP-JunD	NA	NA	rs11738129	0.39	0.39	0.378	0.366613	0.5497	0.2143	0.3934	0.2905	0.4192	0.54	0.2	0.44	0.33	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.42982	1.42982	NA	0.577938	0.303468	NA	0.428	NA	3.872362
1265	14	64554266	64554266	G	A	intronic	SYNE2	NA	NA	NA	intronic	ENSG00000054654,ENSG00000140009	NA	NA	NA	NA	NA	14q23.2	NA	NA	NA	NA	rs72720309	0.1	0.1	0.101	0.101637	0.0517	0.0556	0.1009	0.1982	0.0706	0.05	0.06	0.11	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.883414	NA	NA	0.076025	0.159682	NA	0.109	NA	3.872275
1265	1	110037709	110037709	C	T	intronic	CYB561D1	NA	NA	NA	intronic	ENSG00000174151	NA	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	rs45448998	0.03	0.03	0.025	0.0333466	0.0765	0.001	0.0519	0.0038	0.0491	0.06	0.0017	0.05	0.01	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.659852	1.659852	NA	0.051226	0.013006	NA	0.051	NA	3.872274
1265	4	100062675	100062675	T	G	ncRNA_intronic	LOC100507053	NA	NA	NA	ncRNA_intronic	ENSG00000246090	NA	NA	NA	NA	NA	4q23	NA	NA	NA	NA	rs13138294	0.14	0.14	0.124	0.117013	0.2773	NA	0.1729	0.0688	0.0982	0.27	NA	0.19	0.07	0.229	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.03335	NA	NA	0.288372	0.108942	NA	0.232	NA	3.8719946
1265	1	203817608	203817608	A	G	intronic	ZC3H11A	NA	NA	NA	intronic	ENSG00000058673	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs12085020	0.09	0.09	0.089	0.0872604	0.1282	0.0357	0.0562	0.112	0.0869	0.13	0.04	0.08	0.08	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.495598	NA	NA	NA	NA	ID=COSN163399;OCCURENCE=1(breast)	0.058	NA	3.8718
1265	2	165364887	165364887	G	A	intronic	GRB14	NA	NA	NA	intronic	ENSG00000115290	NA	NA	NA	NA	NA	2q24.3	NA	NA	NA	NA	rs8192674	0.09	0.09	0.074	0.0944489	0.1282	0.0129	0.1945	0.0696	0.1063	0.13	0.01	0.16	0.07	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.863532	NA	NA	NA	NA	NA	0.152	NA	3.8718
1265	3	195974181	195974181	T	C	intronic	PCYT1A	NA	NA	NA	intronic	ENSG00000161217	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs2280525	0.11	0.11	0.109	0.114816	0.1282	0.0833	0.1023	0.0802	0.1892	0.13	0.09	0.11	0.1	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.950301	NA	NA	NA	NA	NA	0.087	NA	3.8718
1265	4	70288577	70288577	T	C	intergenic	UGT2B28,UGT2B4	dist=127809;dist=57306	NA	NA	ncRNA_intronic	ENSG00000249956	NA	NA	NA	NA	NA	4q13.2	NA	NA	NA	NA	rs10021273	0.07	0.07	0.058	0.0632987	0.1282	NA	0.0648	0.0408	0.091	0.12	NA	0.09	0.04	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.16912	NA	NA	NA	NA	NA	0.145	NA	3.8718
1265	7	150720071	150720071	G	A	intronic	ATG9B	NA	NA	NA	intronic	ENSG00000181652	NA	NA	NA	NA	NA	7q36.1	NA	NA	NA	NA	rs11760487	0.07	0.07	0.077	0.0970447	0.1282	0.0099	0.0879	0.0499	0.2249	0.13	0.01	0.08	0.06	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.824254	NA	NA	NA	NA	NA	0.152	NA	3.8718
1265	8	69728008	69728008	A	G	intronic	C8orf34	NA	NA	NA	intronic	ENSG00000165084	NA	NA	NA	NA	NA	8q13.2	NA	NA	NA	NA	rs16935099	0.19	0.19	0.209	0.21865	0.1282	0.4276	0.1311	0.1233	0.2873	0.12	0.41	0.11	0.11	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.016285	NA	NA	NA	NA	ID=COSN168340;OCCURENCE=1(large_intestine)	0.145	NA	3.8718
1265	9	137671814	137671814	A	G	intronic	COL5A1	NA	NA	NA	intronic	ENSG00000130635	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs34589987	0.16	0.16	0.173	0.180911	0.1282	0.1458	0.0793	0.3109	0.1677	0.13	0.11	0.07	0.32	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.623886	NA	NA	NA	NA	NA	0.261	NA	3.8718
1265	11	51393840	51393840	A	G	intergenic	LOC646813,OR4A5	dist=1014038;dist=17538	NA	NA	ncRNA_exonic	ENSG00000255078	NA	NA	NA	NA	NA	11p11.12	NA	NA	NA	NA	rs12422078	0.12	0.12	0.098	0.112819	0.1282	0.1438	0.1023	0.0575	0.1472	0.13	0.15	0.09	0.08	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.323965	NA	NA	NA	NA	NA	0.123	NA	3.8718
1265	16	29852860	29852860	C	T	intronic	MVP	NA	NA	NA	intronic	ENSG00000013364	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs3815824	0.13	0.13	0.125	0.128794	0.1282	0.0357	0.085	0.2458	0.0982	0.13	0.04	0.1	0.26	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.243406	NA	NA	NA	NA	NA	0.167	NA	3.8718
1265	19	52003090	52003090	C	T	intronic	SIGLEC12	NA	NA	NA	intronic	ENSG00000254521	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs45554634	0.11	0.11	0.113	0.0922524	0.1282	NA	0.072	0.1921	0.0297	0.13	NA	0.09	0.23	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.492773	NA	NA	NA	NA	NA	0.152	NA	3.8718
1265	20	47628363	47628363	G	A	intronic	ARFGEF2	NA	NA	NA	intronic	ENSG00000124198	NA	NA	NA	NA	NA	20q13.13	NA	NA	NA	NA	rs1535268	0.2	0.2	0.167	0.197085	0.1282	0.3938	0.268	0.0038	0.2761	0.14	0.42	0.22	0.01	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.89461	NA	NA	NA	NA	NA	0.203	NA	3.8718
1265	15	34536143	34536143	G	T	intronic	SLC12A6	NA	NA	NA	intronic	ENSG00000140199	NA	NA	NA	NA	NA	15q14	NA	NA	NA	NA	rs79436830	0.02	0.02	0.023	0.0217652	0.0497	NA	0.0317	0.003	0.0337	0.05	NA	0.02	NA	0.0383	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.388876	NA	NA	0.040251	0.005906	NA	NA	NA	3.871749
1265	19	32949099	32949099	C	G	intronic	DPY19L3	NA	NA	NA	intronic	ENSG00000178904	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs12327772	0.02	0.02	0.023	0.01877	0.0467	0.002	0.0231	0.0076	0.0194	0.05	0.0017	0.02	0.01	0.0351	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.58236	NA	NA	0.046628	0.017038	NA	0.029	NA	3.871572
1265	14	106091697	106091697	T	C	intergenic	TMEM121,ELK2AP	dist=95158;dist=44217	NA	NA	exonic	ENSG00000211892	NA	synonymous SNV	ENSG00000211892:ENST00000390543:exon2:c.A315G:p.P105P	NA	NA	14q32.33	NA	NA	NA	NA	rs56210451	0.34	0.34	0.287	NA	NA	NA	NA	NA	NA	0.3	0.46	0.28	0.32	0.3192	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.856362	NA	NA	0.309979	0.293766	NA	0.297	NA	3.870821
1265	9	90262393	90262393	G	A	intronic	DAPK1	NA	NA	NA	intronic	ENSG00000196730	NA	NA	NA	NA	NA	9q21.33	NA	NA	NA	NA	rs2274607	0.21	0.21	0.229	0.222244	0.1292	0.2054	0.1268	0.3865	0.181	0.13	0.22	0.15	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.895582	NA	NA	NA	NA	NA	0.159	NA	3.8708
1265	15	31094000	31094000	C	T	intergenic	LOC100288637,HERC2P10	dist=28791;dist=16239	NA	NA	ncRNA_intronic	ENSG00000103832	NA	NA	NA	NA	NA	15q13.2	NA	NA	NA	NA	rs6493293	0.09	0.09	0.107	0.224241	0.1292	0.252	0.2161	0.2481	0.2669	0.04	0.07	0.07	0.2	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.933369	NA	NA	NA	NA	NA	0.022	NA	3.8708
1265	16	29855731	29855731	G	A	intronic	MVP	NA	NA	NA	intronic	ENSG00000013364	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs9939514	0.13	0.13	0.123	0.128594	0.1292	0.0357	0.085	0.2443	0.0982	0.13	0.04	0.1	0.25	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.01786	NA	NA	NA	NA	NA	0.167	NA	3.8708
1265	17	27238075	27238075	G	A	intronic	PHF12	NA	NA	NA	intronic	ENSG00000109118	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs2277665	0.13	0.13	0.123	0.11901	0.1292	0.0506	0.1167	0.1989	0.0726	0.11	0.07	0.14	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.445236	NA	NA	NA	NA	NA	0.145	NA	3.8708
1265	17	33486191	33486191	G	A	intronic	UNC45B	NA	NA	NA	intronic	ENSG00000141161	NA	NA	NA	NA	NA	17q12	NA	NA	NA	NA	rs2046237	0.19	0.19	0.179	0.202077	0.1292	0.1895	0.1153	0.357	0.1421	0.13	0.17	0.13	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.208672	2.208672	NA	NA	NA	NA	0.225	NA	3.8708
1265	19	16090799	16090799	C	T	intergenic	OR10H4,LINC00661	dist=30031;dist=35645	NA	NA	ncRNA_intronic	ENSG00000267392	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs12462827	0.27	0.27	0.277	0.303115	0.1292	0.5536	0.1297	0.3548	0.2771	0.13	0.51	0.1	0.34	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.900591	NA	NA	NA	NA	NA	0.196	NA	3.8708
1265	6	116277792	116277792	G	A	intronic	FRK	NA	NA	NA	intronic	ENSG00000111816	NA	NA	NA	NA	NA	6q22.1	NA	NA	NA	NA	rs17077423	0.09	0.09	0.071	0.0690895	0.0368	0.1379	0.1844	0.0098	0.0297	0.04	0.15	0.17	0.02	0.0646	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.783219	NA	NA	0.028256	0.009305	NA	0.043	NA	3.870344
1265	5	32058115	32058115	A	G	exonic	PDZD2	NA	synonymous SNV	PDZD2:NM_178140:exon11:c.A2106G:p.S702S	exonic	ENSG00000133401	NA	synonymous SNV	ENSG00000133401:ENST00000282493:exon11:c.A2106G:p.S702S,ENSG00000133401:ENST00000438447:exon12:c.A2106G:p.S702S	NA	NA	5p13.3	NA	Name=CTCF	NA	NA	rs151861	0.89	0.89	0.891	0.878594	0.9433	0.7579	0.8948	0.9085	0.8845	0.94	0.8	0.91	0.89	0.9057	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.804452	NA	NA	0.947442	0.911938	NA	0.877	NA	3.8702246
1265	6	97578888	97578888	A	G	ncRNA_intronic	MIR548H3	NA	NA	NA	intronic	ENSG00000186231	NA	NA	NA	NA	NA	6q16.1	NA	NA	NA	NA	rs2387931	0.38	0.38	0.395	0.417332	0.4632	0.245	0.3761	0.4599	0.5194	0.45	0.21	0.37	0.47	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.283281	NA	NA	NA	NA	NA	0.471	NA	3.8701333
1265	5	179306517	179306517	A	G	intronic	TBC1D9B	NA	NA	NA	intronic	ENSG00000197226	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs10073754	0.12	0.12	0.1	0.1252	0.1302	0.1438	0.147	0.0764	0.1513	0.12	0.16	0.15	0.07	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.201721	NA	NA	NA	NA	NA	0.138	NA	3.8698
1265	6	32441126	32441126	C	T	intergenic	HLA-DRA,HLA-DRB5	dist=28300;dist=44028	NA	NA	ncRNA_intronic	ENSG00000196301	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs13217979	0.08	0.08	0.051	0.0748802	0.1302	0.0417	0.0836	0.0514	0.0777	0.13	0.04	0.09	0.06	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.139543	NA	NA	NA	NA	NA	0.065	NA	3.8698
1265	20	5990625	5990625	T	C	intronic	CRLS1	NA	NA	NA	intronic	ENSG00000088766	NA	NA	NA	NA	NA	20p12.3	NA	NA	NA	NA	rs6085346	0.07	0.07	0.062	0.0559105	0.1302	0.0099	0.0922	0.0182	0.0521	0.13	0.01	0.11	0.03	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.791172	NA	NA	NA	NA	NA	0.072	NA	3.8698
1265	22	17446914	17446914	T	G	intronic	GAB4	NA	NA	NA	intronic	ENSG00000215568	NA	NA	NA	NA	NA	22q11.1	NA	NA	NA	NA	rs5748766	0.21	0.21	0.214	0.204073	0.1302	0.3859	0.1254	0.2352	0.1063	0.12	0.36	0.12	0.26	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.136157	NA	NA	NA	NA	NA	0.188	NA	3.8698
1265	22	50306969	50306969	G	A	intronic	ALG12	NA	NA	NA	intronic	ENSG00000182858	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs56248708	0.11	0.11	0.12	0.110623	0.1302	0.0546	0.0865	0.1339	0.1339	0.14	0.06	0.1	0.14	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.003	NA	NA	NA	NA	NA	0.203	NA	3.8698
1265	9	75445494	75445494	C	T	intronic	TMC1	NA	NA	NA	intronic	ENSG00000165091	NA	NA	NA	NA	NA	9q21.13	NA	NA	NA	NA	rs13286809	0.07	0.07	0.085	0.0752796	0.0437	0.0208	0.0432	0.2057	0.0102	0.04	0.02	0.05	0.19	0.0468	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.262815	NA	NA	0.039884	0.180209	NA	0.116	NA	3.869616
1265	6	152472660	152472660	T	A	intronic	SYNE1	NA	NA	NA	intronic	ENSG00000131018	NA	NA	NA	NA	NA	6q25.1	NA	NA	NA	NA	rs2348080	0.04	0.04	0.035	0.0317492	0.0487	0.001	0.0476	0.0446	0.0174	0.04	NA	0.06	0.05	0.0384	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.178535	NA	NA	0.043382	0.043804	NA	0.036	NA	3.869518
1265	5	149439458	149439458	T	G	intronic	CSF1R	NA	NA	NA	intronic	ENSG00000182578	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs3733671	0.08	0.08	0.092	0.0882588	0.0298	0.126	0.0187	0.1445	0.0828	0.03	0.12	0.02	0.16	0.06	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.388846	NA	NA	0.040698	0.115524	NA	0.08	NA	3.869502
1265	17	45885687	45885687	A	G	exonic	OSBPL7	NA	synonymous SNV	OSBPL7:NM_145798:exon23:c.T2499C:p.Y833Y	exonic	ENSG00000006025	NA	synonymous SNV	ENSG00000006025:ENST00000007414:exon23:c.T2499C:p.Y833Y,ENSG00000006025:ENST00000392507:exon23:c.T2499C:p.Y833Y	Score=517;Name=lod=169	NA	17q21.32	NA	NA	NA	NA	rs9907142	0.86	0.86	0.846	0.836661	0.9473	0.8165	0.8718	0.7685	0.8108	0.95	0.8	0.88	0.8	0.9032	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.244635	1.244635	NA	0.946977	0.831366	NA	0.87	NA	3.8691896
1265	16	74394671	74394671	T	C	ncRNA_exonic	LOC283922	NA	NA	NA	ncRNA_exonic	ENSG00000214331	NA	NA	NA	NA	NA	16q23.1	NA	NA	NA	NA	rs62055171	NA	NA	0.21	0.34984	0.3946	0.2341	0.2997	0.4228	0.3599	NA	NA	NA	NA	0.4029	0.076	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.096155	NA	NA	NA	NA	NA	0.065	NA	3.8691666
1265	10	12160632	12160632	T	C	intronic	DHTKD1	NA	NA	NA	intronic	ENSG00000181192	NA	NA	NA	NA	NA	10p14	NA	NA	NA	NA	rs112318056	0.17	0.17	0.151	0.167532	0.1312	0.0278	0.0922	0.4085	0.0767	0.13	0.03	0.1	0.42	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.81707	NA	NA	NA	NA	NA	0.326	NA	3.8688
1265	10	49445850	49445850	T	C	intronic	FRMPD2	NA	NA	NA	intronic	ENSG00000170324	NA	NA	NA	NA	NA	10q11.22	NA	NA	NA	NA	rs68069145	0.1	0.1	0.091	0.100839	0.1312	0.0754	0.0692	0.1044	0.1135	0.14	0.06	0.07	0.1	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.235997	NA	NA	NA	NA	NA	0.167	NA	3.8688
1265	11	83674180	83674180	T	A	intronic	DLG2	NA	NA	NA	intronic	ENSG00000150672	NA	NA	NA	NA	NA	11q14.1	NA	NA	NA	NA	rs7952093	0.13	0.13	0.142	0.126997	0.1312	NA	0.0706	0.298	0.0624	0.12	NA	0.09	0.3	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.085501	NA	NA	NA	NA	NA	0.116	NA	3.8688
1265	13	23808914	23808914	A	C	intronic	SGCG	NA	NA	NA	intronic	ENSG00000102683	NA	NA	NA	NA	NA	13q12.12	NA	NA	NA	NA	rs4769246	0.18	0.18	0.162	0.159744	0.1312	0.2946	0.1009	0.1483	0.1074	0.15	0.29	0.1	0.15	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.14123	NA	NA	NA	NA	NA	0.116	NA	3.8688
1265	14	22892139	22892139	C	T	intergenic	OR4E2,DAD1	dist=757901;dist=141668	NA	NA	ncRNA_intronic	ENSG00000251002	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs75422358	0.17	0.17	0.101	0.159944	0.1312	0.1806	0.2349	0.1823	0.0849	0.13	0.18	0.18	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.604695	NA	NA	NA	NA	NA	0.123	NA	3.8688
1265	19	43454014	43454014	G	A	intergenic	PSG7,PSG11	dist=12684;dist=57795	NA	NA	ncRNA_intronic	ENSG00000227349	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs117988926	0.1	0.1	0.071	0.0910543	0.1312	0.003	0.2089	0.0492	0.1135	0.14	0.0017	0.2	0.07	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.169962	NA	NA	NA	NA	NA	0.159	NA	3.8688
1265	20	34572834	34572834	G	A	intronic	CNBD2	NA	NA	NA	intronic	ENSG00000149646	NA	NA	NA	NA	NA	20q11.23	NA	NA	NA	NA	rs6141583	0.14	0.14	0.141	0.160543	0.1312	0.2272	0.134	0.0991	0.2239	0.12	0.18	0.16	0.1	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.269099	NA	NA	NA	NA	NA	0.087	NA	3.8688
1265	20	40081702	40081702	C	T	intronic	CHD6	NA	NA	NA	intronic	ENSG00000124177	NA	NA	NA	NA	NA	20q12	NA	NA	NA	NA	rs62208497	0.06	0.06	0.058	0.0599042	0.1312	0.005	0.0533	0.0083	0.1176	0.13	NA	0.06	0.01	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.733628	NA	NA	NA	NA	NA	0.065	NA	3.8688
1265	4	100263942	100263942	C	T	intronic	ADH1C	NA	NA	NA	intronic	ENSG00000248144	NA	NA	NA	NA	NA	4q23	Score=717;Name=V$BRACH_01	NA	NA	NA	rs1789912	0.24	0.24	0.215	0.214657	0.4046	0.0764	0.2723	0.0998	0.2761	0.41	0.07	0.31	0.12	0.3431	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.878644	NA	NA	0.383605	0.149569	NA	0.21	NA	3.868695
1265	6	31133663	31133663	T	C	intronic	POU5F1	NA	NA	NA	UTR5	ENSG00000204531	ENST00000513407:c.-247A>G	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs45438402	0.09	0.09	0.074	0.08127	0.1123	0.0347	0.1383	0.0666	0.0767	0.12	0.04	0.15	0.06	0.0994	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.637909	NA	NA	0.086744	0.05901	NA	0.051	NA	3.8682227
1265	5	13817825	13817825	T	C	intronic	DNAH5	NA	NA	NA	intronic	ENSG00000039139	NA	NA	NA	NA	NA	5p15.2	NA	NA	NA	NA	rs17265718	0.02	0.02	0.009	0.0203674	0.0437	NA	0.0216	0.0038	0.0389	0.05	NA	0.02	0.01	0.0406	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.446171	1.446171	NA	0.047791	0.008625	NA	0.007	NA	3.867909
1265	11	1471095	1471095	C	T	intronic	BRSK2	NA	NA	NA	intronic	ENSG00000174672	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs117021012	0.02	0.02	0.013	0.0147764	0.0388	0.001	0.0202	0.003	0.0164	0.04	NA	0.03	0.002	0.0376	0.056	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.355274	NA	NA	0.055717	0.013028	NA	0.014	NA	3.867883
1265	9	133505952	133505952	C	G	intronic	FUBP3	NA	NA	NA	intronic	ENSG00000107164	NA	NA	NA	NA	NA	9q34.12	NA	NA	NA	NA	rs2304810	0.18	0.18	0.16	0.209465	0.1322	0.1111	0.2349	0.3185	0.2249	0.13	0.12	0.2	0.3	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.157628	NA	NA	NA	NA	NA	0.225	NA	3.8678
1265	11	117100029	117100029	G	A	intronic	PCSK7	NA	NA	NA	intronic	ENSG00000160613	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs4938362	0.16	0.16	0.157	0.180711	0.1322	0.0685	0.2176	0.2958	0.1646	0.13	0.09	0.19	0.26	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.647626	NA	NA	NA	NA	NA	0.123	NA	3.8678
1265	12	6705380	6705380	C	T	intronic	CHD4	NA	NA	NA	intronic	ENSG00000111642	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs66627071	0.11	0.11	0.114	0.119209	0.1322	0.004	0.0663	0.2073	0.1431	0.13	0.0017	0.09	0.23	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.184921	NA	NA	NA	NA	NA	0.138	NA	3.8678
1265	22	50507094	50507094	T	C	intronic	MLC1	NA	NA	NA	intronic	ENSG00000100427	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs111258391	0.11	0.11	0.091	0.13139	0.1322	0.0923	0.1758	0.059	0.2372	0.13	0.1	0.16	0.08	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.788828	NA	NA	NA	NA	NA	0.058	NA	3.8678
1265	9	131745548	131745548	T	C	intronic	NUP188	NA	NA	NA	intronic	ENSG00000095319	NA	NA	NA	NA	NA	9q34.11	NA	NA	Name=10	NA	rs719703	0.29	0.29	0.268	0.271965	0.4076	0.253	0.402	0.087	0.3098	0.41	0.23	0.39	0.11	0.3482	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.746532	NA	NA	0.376512	0.125057	NA	0.348	NA	3.867688
1265	20	1291018	1291018	G	A	ncRNA_exonic	FKBP1A-SDCBP2	NA	NA	NA	UTR3	ENSG00000125775	ENST00000360779:c.*67C>T,ENST00000339987:c.*67C>T,ENST00000381812:c.*67C>T,ENST00000381808:c.*67C>T	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs11449	0.32	0.32	0.299	0.31869	0.329	0.4206	0.3285	0.174	0.3916	0.34	0.43	0.3	0.16	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.284009	NA	NA	0.303459	0.209538	NA	0.377	NA	3.867541
1265	6	30230128	30230128	T	C	ncRNA_intronic	HCG17,HLA-L	NA	NA	NA	ncRNA_intronic	ENSG00000243753,ENSG00000270604	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs2523745	0.34	0.34	0.273	0.397564	0.2465	0.5308	0.4496	0.3003	0.5102	0.22	0.48	0.4	0.3	0.3143	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.194795	NA	NA	0.238372	0.273718	NA	0.348	NA	3.8674946
1265	2	168931610	168931610	G	A	intronic	STK39	NA	NA	NA	intronic	ENSG00000198648	NA	NA	NA	NA	NA	2q24.3	NA	NA	NA	NA	rs3739115	0.1	0.1	0.094	0.101837	0.0318	0.1954	0.1182	0.031	0.1616	0.04	0.23	0.12	0.04	0.0747	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.151877	2.151877	NA	0.026043	0.030326	NA	0.014	NA	3.867457
1265	1	21799414	21799414	G	A	intronic	NBPF3	NA	NA	NA	intronic	ENSG00000142794	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs78430674	0.05	0.05	0.047	0.0467252	0.0388	NA	0.0346	0.112	0.0235	0.04	NA	0.04	0.1	0.0441	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.575476	NA	NA	0.049884	0.108488	NA	0.065	NA	3.867216
1265	7	139727043	139727043	T	C	intronic	PARP12	NA	NA	NA	intronic	ENSG00000059378	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs113550438	0.06	0.06	0.067	0.0738818	0.0408	NA	0.0375	0.2073	0.0297	0.04	NA	0.03	0.18	0.0482	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.1307	NA	NA	0.044186	0.185202	NA	0.072	NA	3.866814
1265	1	200969983	200969983	T	C	intronic	KIF21B	NA	NA	NA	intronic	ENSG00000116852	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs6656481	0.37	0.37	0.355	0.388978	0.1332	0.4474	0.2061	0.7526	0.2301	0.13	0.45	0.2	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.080837	NA	NA	NA	NA	NA	0.312	NA	3.8668
1265	2	136511951	136511951	G	C	intronic	UBXN4	NA	NA	NA	intronic	ENSG00000144224	NA	NA	NA	NA	NA	2q21.3	NA	NA	NA	NA	rs7609188	0.19	0.19	0.193	0.241214	0.1332	0.1825	0.2695	0.298	0.316	0.13	0.16	0.22	0.32	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.502484	NA	NA	NA	NA	NA	0.196	NA	3.8668
1265	6	155486643	155486643	A	G	intronic	TIAM2	NA	NA	NA	intronic	ENSG00000146426	NA	NA	NA	NA	NA	6q25.2	NA	NA	NA	NA	rs73795328	0.08	0.08	0.069	0.0571086	0.1332	0.001	0.0951	0.0514	0.0174	0.13	0.0017	0.1	0.07	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.116707	NA	NA	NA	NA	NA	0.065	NA	3.8668
1265	12	1005162	1005162	T	C	intronic	WNK1	NA	NA	NA	intronic	ENSG00000060237	NA	NA	NA	NA	NA	12p13.33	NA	NA	NA	NA	rs35956200	0.11	0.11	0.104	0.108626	0.1332	0.1081	0.0793	0.0635	0.1656	0.13	0.1	0.1	0.07	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.330766	NA	NA	NA	NA	ID=COSN164107;OCCURENCE=1(breast)	0.203	NA	3.8668
1265	13	23708518	23708518	G	A	intergenic	BASP1P1,SGCG	dist=236198;dist=46542	NA	NA	ncRNA_exonic	ENSG00000233440	NA	NA	NA	NA	NA	13q12.12	NA	NA	NA	NA	rs9510592	0.1	0.1	0.11	0.081869	0.1332	NA	0.0879	0.112	0.0685	0.13	NA	0.11	0.15	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.245839	NA	NA	NA	NA	NA	0.181	NA	3.8668
1265	14	77950585	77950585	A	G	intronic	ISM2	NA	NA	NA	intronic	ENSG00000100593	NA	NA	NA	NA	NA	14q24.3	NA	NA	NA	NA	rs73316987	0.15	0.15	0.144	0.16234	0.1332	0.0149	0.2075	0.3094	0.1135	0.14	0.02	0.22	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.491143	NA	NA	NA	NA	NA	0.181	NA	3.8668
1265	19	50542359	50542359	G	A	intronic	ZNF473	NA	NA	NA	intronic	ENSG00000142528	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs2278283	0.19	0.19	0.19	0.170527	0.1332	0.3393	0.1254	0.1301	0.1217	0.15	0.33	0.14	0.15	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.051154	NA	NA	NA	NA	NA	0.188	NA	3.8668
1265	22	50507064	50507064	G	C	intronic	MLC1	NA	NA	NA	intronic	ENSG00000100427	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs75474964	0.11	0.11	0.088	0.131589	0.1332	0.0923	0.1758	0.059	0.2372	0.13	0.1	0.16	0.08	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.703723	NA	NA	NA	NA	NA	0.036	NA	3.8668
1265	11	5142270	5142270	T	G	intergenic	OR52E2,OR52A5	dist=61413;dist=10652	NA	NA	ncRNA_exonic	ENSG00000205494	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs10837375	0.72	0.72	0.723	0.735224	0.7147	0.5675	0.7161	0.8896	0.7342	0.71	0.58	0.72	0.91	0.7149	0.91	0.29	T	0.001	B	0.0	B	.	.	0.996	P	.	.	.	.	-1.030	T	0.000	T	.	1.537	11.09	3.0	0.418	-0.077	8.408	1.536902	1.536902	0.91	0.703816	0.868242	NA	0.761	NA	3.866584
1265	6	116757557	116757557	T	C	exonic	DSE	NA	synonymous SNV	DSE:NM_001080976:exon6:c.T1926C:p.N642N,DSE:NM_013352:exon6:c.T1926C:p.N642N	exonic	ENSG00000111817	NA	synonymous SNV	ENSG00000111817:ENST00000359564:exon6:c.T1926C:p.N642N,ENSG00000111817:ENST00000452085:exon6:c.T1926C:p.N642N,ENSG00000111817:ENST00000537543:exon6:c.T1983C:p.N661N,ENSG00000111817:ENST00000331677:exon7:c.T1926C:p.N642N	Score=598;Name=lod=360	NA	6q22.1	NA	NA	NA	NA	rs560644	0.96	0.96	0.97	0.976038	0.9155	0.998	0.9726	0.9977	0.9888	0.91	1	0.96	1	0.9529	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.199605	NA	NA	0.931744	0.98502	NA	0.928	NA	3.8665226
1265	1	156352396	156352396	C	T	intronic	RHBG	NA	NA	NA	UTR3	ENSG00000132677	ENST00000537040:c.*327C>T	NA	NA	NA	NA	1q22	NA	NA	NA	NA	rs872120	0.36	0.36	0.352	0.347444	0.3002	0.3542	0.389	0.3949	0.2955	0.3	0.35	0.41	0.39	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.010305	NA	NA	NA	NA	NA	0.406	NA	3.8664667
1265	19	56423668	56423668	G	A	exonic	NLRP13	NA	synonymous SNV	NLRP13:NM_176810:exon5:c.C1515T:p.I505I	exonic	ENSG00000173572	NA	synonymous SNV	ENSG00000173572:ENST00000342929:exon5:c.C1515T:p.I505I,ENSG00000173572:ENST00000588751:exon5:c.C1515T:p.I505I	NA	NA	19q13.43	NA	NA	NA	NA	rs304001	0.62	0.62	0.633	0.648363	0.5905	0.7302	0.5014	0.6861	0.6769	0.58	0.71	0.53	0.66	0.6011	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.3061	NA	NA	0.608837	0.664548	NA	0.725	NA	3.8662296
1265	15	85438132	85438132	T	C	intronic	SLC28A1	NA	NA	NA	intronic	ENSG00000156222	NA	NA	NA	NA	NA	15q25.3	NA	NA	NA	NA	rs7166440	0.05	0.05	0.036	0.0441294	0.0497	0.001	0.0375	0.0885	0.0276	0.04	NA	0.05	0.1	0.0405	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.461746	NA	NA	0.043615	0.089424	NA	0.043	NA	3.866185
1265	4	2177929	2177929	G	A	intronic	POLN	NA	NA	NA	intronic	ENSG00000130997	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs6823382	0.23	0.23	0.226	0.239816	0.0716	0.3413	0.1787	0.3888	0.1503	0.07	0.34	0.18	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.623874	NA	NA	0.062225	0.339595	NA	0.232	NA	3.866175
1265	1	94526044	94526044	A	G	intronic	ABCA4	NA	NA	NA	intronic	ENSG00000198691	NA	NA	NA	NA	NA	1p22.1	NA	NA	NA	NA	rs56197337	0.05	0.05	0.05	0.0543131	0.0408	0.0298	0.0706	0.0756	0.0532	0.04	0.02	0.04	0.1	0.0491	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.29968	1.29968	NA	0.04407	0.069224	NA	0.145	NA	3.86603
1265	12	48888689	48888689	C	G	exonic	C12orf54	NA	synonymous SNV	C12orf54:NM_152319:exon8:c.C351G:p.L117L	exonic	ENSG00000177627	NA	synonymous SNV	ENSG00000177627:ENST00000549398:exon3:c.C183G:p.L61L,ENSG00000177627:ENST00000548364:exon7:c.C351G:p.L117L,ENSG00000177627:ENST00000314014:exon8:c.C351G:p.L117L	NA	NA	12q13.11	NA	NA	NA	NA	rs9268	0.38	0.38	0.39	0.316893	0.6421	0.1766	0.3689	0.1248	0.3497	0.65	0.22	0.4	0.15	0.5012	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.307055	NA	NA	0.657442	0.218566	NA	0.449	NA	3.8659246
1265	1	227239739	227239739	T	A	intronic	CDC42BPA	NA	NA	NA	intronic	ENSG00000143776	NA	NA	NA	NA	NA	1q42.13	NA	NA	NA	NA	rs55865118	0.12	0.12	0.131	0.124002	0.1342	NA	0.0879	0.2905	0.0419	0.13	NA	0.1	0.28	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.980231	1.980231	NA	NA	NA	NA	0.145	NA	3.8658
1265	3	183773250	183773250	C	T	intronic	HTR3C	NA	NA	NA	intronic	ENSG00000178084	NA	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs56333453	0.09	0.09	0.072	0.0814696	0.1342	0.0308	0.1182	0.0666	0.0736	0.14	0.03	0.1	0.06	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.208496	NA	NA	NA	NA	NA	0.065	NA	3.8658
1265	4	56737489	56737489	G	A	intronic	EXOC1	NA	NA	NA	intronic	ENSG00000090989	NA	NA	NA	NA	NA	4q12	NA	NA	NA	NA	rs73238378	0.24	0.24	0.219	0.222843	0.1342	0.5169	0.1888	0.1067	0.1922	0.14	0.49	0.17	0.14	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.489003	NA	NA	NA	NA	NA	0.21	NA	3.8658
1265	9	137733937	137733937	T	G	intronic	COL5A1	NA	NA	NA	intronic	ENSG00000130635	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs12554062	0.15	0.15	0.129	0.139377	0.1342	0.1895	0.0879	0.1596	0.1022	0.12	0.21	0.09	0.15	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.784372	NA	NA	NA	NA	NA	0.203	NA	3.8658
1265	11	49168612	49168612	T	C	intronic	FOLH1	NA	NA	NA	intronic	ENSG00000086205	NA	NA	NA	NA	NA	11p11.12	NA	NA	NA	NA	rs598841	0.17	0.17	0.138	0.172724	0.1342	0.1577	0.1239	0.2943	0.0982	0.13	0.15	0.11	0.27	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.373285	NA	NA	NA	NA	NA	0.145	NA	3.8658
1265	15	79215238	79215238	T	C	intronic	CTSH	NA	NA	NA	intronic	ENSG00000103811	NA	NA	NA	NA	NA	15q25.1	NA	NA	NA	NA	rs2289691	0.16	0.16	0.154	0.144968	0.1342	0.2629	0.1326	0.1165	0.0818	0.14	0.27	0.12	0.11	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.410921	NA	NA	NA	NA	NA	0.145	NA	3.8658
1265	16	71787918	71787918	G	C	intronic	AP1G1	NA	NA	NA	intronic	ENSG00000166747	NA	NA	NA	NA	NA	16q22.2	NA	NA	NA	NA	rs3764309	0.13	0.13	0.12	0.170128	0.1342	0.1756	0.1081	0.0333	0.4305	0.14	0.19	0.12	0.04	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.657247	NA	NA	NA	NA	NA	0.116	NA	3.8658
1265	19	43453831	43453831	G	A	intergenic	PSG7,PSG11	dist=12501;dist=57978	NA	NA	ncRNA_exonic	ENSG00000227349	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs148983800	0.1	0.1	0.052	0.0916534	0.1342	0.004	0.2089	0.0484	0.1135	0.14	0.0017	0.19	0.07	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.864066	NA	NA	NA	NA	NA	0.065	NA	3.8658
1265	19	54743056	54743056	C	T	intronic	LILRA6	NA	NA	NA	intronic	ENSG00000170889,ENSG00000204577,ENSG00000244482	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs10401694	0.12	0.12	0.116	0.171526	0.1342	0.006	0.1455	0.2209	0.3323	0.13	0.0035	0.12	0.24	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.341108	NA	NA	NA	NA	NA	0.181	NA	3.8658
1265	22	36933283	36933283	T	C	intergenic	EIF3D,CACNG2	dist=8006;dist=23633	NA	NA	ncRNA_intronic	ENSG00000188078	NA	NA	NA	NA	NA	22q12.3	NA	NA	NA	NA	rs8140727	0.1	0.1	0.063	0.0834665	0.1342	0.002	0.2334	0.0325	0.0777	0.14	0.0017	0.22	0.06	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.729237	NA	NA	NA	NA	NA	0.101	NA	3.8658
1265	22	46674639	46674639	G	A	intronic	TTC38	NA	NA	NA	intronic	ENSG00000075234	NA	NA	NA	NA	NA	22q13.31	NA	NA	NA	NA	rs6008473	0.18	0.18	0.194	0.197684	0.1342	0.0069	0.1167	0.5257	0.0736	0.13	0.01	0.14	0.49	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.812966	NA	NA	NA	NA	NA	0.254	NA	3.8658
1265	1	223990623	223990623	G	A	intronic	TP53BP2	NA	NA	NA	intronic	ENSG00000143514	NA	NA	NA	NA	NA	1q41	NA	NA	NA	NA	rs77933928	0.02	0.02	0.018	0.0177716	0.0487	NA	0.0202	0.0023	0.0235	0.05	NA	0.01	0.0041	0.0377	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.949629	2.949629	NA	0.048023	0.008852	NA	0.014	NA	3.865577
1265	7	56155519	56155519	G	A	intronic	PHKG1	NA	NA	NA	intronic	ENSG00000164776	NA	NA	NA	NA	NA	7p11.2	NA	NA	NA	NA	rs72499804	0.04	0.04	0.019	0.0375399	0.0427	0.0119	0.111	0.0045	0.0511	0.04	0.01	0.1	0.01	0.0493	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.07895	NA	NA	0.042538	0.011264	NA	0.022	NA	3.865462
1265	10	6066195	6066195	T	A	intronic	IL2RA	NA	NA	NA	intronic	ENSG00000134460	NA	NA	NA	NA	NA	10p15.1	NA	Name=c-Myc	NA	NA	rs12358961	0.35	0.35	0.342	0.320288	0.4006	0.4067	0.5245	0.1097	0.2883	0.39	0.4	0.49	0.12	0.3608	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.606277	NA	NA	0.37314	0.14798	ID=COSN163542;OCCURENCE=1(breast)	0.333	NA	3.86546
1265	6	30231108	30231108	G	T	ncRNA_exonic	HLA-L	NA	NA	NA	ncRNA_exonic	ENSG00000243753	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs2516699	0.34	0.34	0.294	0.397564	0.2465	0.5308	0.4496	0.3003	0.5102	0.22	0.48	0.4	0.3	0.3143	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.971342	NA	NA	0.240465	0.278711	NA	0.377	NA	3.8654016
1265	6	30230085	30230085	T	C	ncRNA_exonic	HLA-L	NA	NA	NA	ncRNA_exonic	ENSG00000243753	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs2523746	0.34	0.34	0.284	0.397564	0.2465	0.5308	0.4496	0.3003	0.5102	0.22	0.48	0.4	0.3	0.3143	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.293921	NA	NA	0.240581	0.278484	NA	0.384	NA	3.8652856
1265	2	86346180	86346180	G	A	intronic	PTCD3	NA	NA	NA	intronic	ENSG00000132300	NA	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs2303339	0.1	0.1	0.11	0.090655	0.0398	0.1389	0.0389	0.1755	0.0153	0.04	0.15	0.04	0.17	0.0526	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.592685	NA	NA	0.042442	0.150704	NA	0.065	NA	3.865158
1265	6	30231071	30231071	G	A	ncRNA_exonic	HLA-L	NA	NA	NA	ncRNA_exonic	ENSG00000243753	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs2516700	0.34	0.34	0.303	0.397564	0.2465	0.5308	0.4496	0.3003	0.5102	0.22	0.48	0.4	0.3	0.3145	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.210415	NA	NA	0.240581	0.278711	NA	0.377	NA	3.8650856
1266	4	184250520	184250520	C	T	intergenic	CLDN24,CDKN2AIP	dist=6941;dist=115269	NA	NA	ncRNA_exonic	ENSG00000238596	NA	NA	NA	NA	NA	4q35.1	NA	NA	NA	NA	rs35577734	0.08	0.08	0.076	0.0712859	0.1352	0.0833	0.0461	0.0038	0.1022	0.13	0.09	0.05	0.0041	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.798846	NA	NA	NA	NA	NA	0.043	NA	3.8648
1266	8	54445600	54445600	T	C	intergenic	OPRK1,ATP6V1H	dist=281406;dist=182503	NA	NA	ncRNA_intronic	ENSG00000240919	NA	NA	NA	NA	NA	8q11.23	NA	NA	NA	NA	rs4873758	0.14	0.14	0.112	0.135383	0.1352	0.1964	0.2478	0.0091	0.1636	0.14	0.22	0.19	0.03	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.788953	NA	NA	NA	NA	NA	0.094	NA	3.8648
1266	5	7899844	7899844	A	G	intronic	MTRR	NA	NA	NA	intronic	ENSG00000124275	NA	NA	NA	NA	NA	5p15.31	NA	NA	NA	NA	rs327592	0.23	0.23	0.232	0.253195	0.1352	0.1696	0.3516	0.4365	0.1431	0.13	0.18	0.31	0.4	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.155903	NA	NA	NA	NA	NA	0.348	NA	3.8648
1266	6	7569326	7569326	C	T	intronic	DSP	NA	NA	NA	intronic	ENSG00000096696	NA	NA	NA	NA	NA	6p24.3	NA	NA	NA	NA	rs11755954	0.07	0.07	0.053	0.0491214	0.1352	NA	0.0634	0.0272	0.0307	0.13	NA	0.09	0.04	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.335951	NA	NA	NA	NA	NA	0.051	NA	3.8648
1266	6	38850576	38850576	G	A	intronic	DNAH8	NA	NA	NA	intronic	ENSG00000124721	NA	NA	NA	NA	NA	6p21.2	NA	NA	NA	NA	rs72852777	0.18	0.18	0.168	0.164137	0.1352	0.1696	0.2522	0.1596	0.1319	0.14	0.19	0.23	0.19	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.64397	NA	NA	NA	NA	NA	0.246	NA	3.8648
1266	11	16847558	16847558	A	G	intronic	PLEKHA7	NA	NA	NA	intronic	ENSG00000166689	NA	NA	NA	NA	NA	11p15.1	NA	NA	NA	NA	rs400458	0.18	0.18	0.2	0.195088	0.1352	0.1637	0.2032	0.3079	0.1309	0.12	0.17	0.19	0.26	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.573152	NA	NA	NA	NA	NA	0.239	NA	3.8648
1266	11	124946930	124946930	G	A	intronic	SLC37A2	NA	NA	NA	intronic	ENSG00000134955	NA	NA	NA	NA	NA	11q24.2	NA	NA	NA	NA	rs7103889	0.24	0.24	0.204	0.227236	0.1352	0.5863	0.17	0.0303	0.2587	0.15	0.59	0.16	0.05	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.554869	NA	NA	NA	NA	NA	0.159	NA	3.8648
1266	12	125497313	125497313	C	T	intronic	BRI3BP	NA	NA	NA	intronic	ENSG00000184992	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs11057985	0.13	0.13	0.132	0.123802	0.1352	0.1468	0.1585	0.0696	0.137	0.15	0.13	0.17	0.08	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.13564	NA	NA	NA	NA	NA	0.072	NA	3.8648
1266	17	10249087	10249087	G	A	intronic	MYH13	NA	NA	NA	intronic	ENSG00000006788	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs1812043	0.31	0.31	0.21	0.317891	0.1352	0.5427	0.268	0.3268	0.2975	0.13	0.56	0.26	0.33	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.859937	NA	NA	NA	NA	NA	0.319	NA	3.8648
1266	22	45996110	45996110	A	G	intronic	FBLN1	NA	NA	NA	intronic	ENSG00000077942	NA	NA	NA	NA	NA	22q13.31	NA	NA	NA	NA	rs2071871	0.31	0.31	0.338	0.354034	0.1352	0.1796	0.219	0.7821	0.2761	0.13	0.17	0.25	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.144108	NA	NA	NA	NA	NA	0.283	NA	3.8648
1266	1	224468921	224468921	C	T	intronic	NVL	NA	NA	NA	intronic	ENSG00000143748	NA	NA	NA	NA	NA	1q42.11	NA	NA	NA	NA	rs79564051	0.07	0.07	0.068	0.0694888	0.0318	0.1131	0.0245	0.0802	0.0808	0.03	0.11	0.03	0.09	0.0518	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.300392	NA	NA	0.052093	0.076487	NA	0.036	NA	3.864307
1266	9	71865932	71865932	G	A	intronic	TJP2	NA	NA	NA	intronic	ENSG00000119139	NA	NA	NA	NA	Name=Renal sinus fat	9q21.11	NA	NA	NA	NA	rs2282335	0.33	0.33	0.338	0.359824	0.3847	0.1696	0.2637	0.475	0.4427	0.38	0.17	0.26	0.48	0.3704	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.697851	NA	NA	0.380698	0.452565	NA	0.457	NA	3.864202
1266	1	205764433	205764433	A	C	intronic	SLC41A1	NA	NA	NA	intronic	ENSG00000133065	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs56052552	0.02	0.02	0.025	0.028155	0.0577	0.0079	0.0173	0.0053	0.0573	0.05	0.0017	0.01	0.01	0.0364	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.040134	NA	NA	0.041744	0.011348	NA	0.007	NA	3.864156
1266	15	51529265	51529265	T	C	intronic	CYP19A1	NA	NA	NA	ncRNA_intronic	ENSG00000259240	NA	NA	NA	NA	NA	15q21.2	NA	NA	NA	NA	rs3759811	0.37	0.37	0.355	0.325679	0.4692	0.4375	0.3156	0.1619	0.2914	0.48	0.45	0.33	0.13	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.477227	NA	NA	NA	NA	ID=COSN164939;OCCURENCE=1(breast)	0.29	NA	3.8641333
1266	11	12315716	12315716	C	T	exonic	MICALCL	NA	synonymous SNV	MICALCL:NM_032867:exon3:c.C738T:p.A246A	exonic	ENSG00000133808	NA	synonymous SNV	ENSG00000133808:ENST00000256186:exon3:c.C738T:p.A246A	NA	NA	11p15.3	Score=798;Name=V$OLF1_01	NA	NA	NA	rs1493951	0.94	0.94	0.942	0.922724	0.9463	0.9415	0.9496	0.9085	0.8793	0.95	0.95	0.94	0.9	0.9269	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.348604	NA	NA	0.92939	0.916268	NA	0.964	NA	3.8640766
1266	1	22912910	22912910	C	T	intronic	EPHA8	NA	NA	NA	intronic	ENSG00000070886	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs12034618	0.13	0.13	0.125	0.134185	0.1362	0.129	0.1513	0.0643	0.2198	0.14	0.12	0.16	0.08	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.317806	NA	NA	NA	NA	NA	0.109	NA	3.8638
1266	1	27158844	27158844	G	T	intronic	ZDHHC18	NA	NA	NA	intronic	ENSG00000204160	NA	NA	NA	NA	NA	1p36.11	NA	NA	NA	NA	rs34924059	0.09	0.09	0.072	0.0836661	0.1362	0.0327	0.0821	0.0734	0.0971	0.13	0.04	0.1	0.05	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.757076	NA	NA	NA	NA	NA	0.058	NA	3.8638
1266	2	89428423	89428423	A	G	intergenic	MIR4436A,NONE	dist=316455;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000254157	NA	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs28409615	0.3	0.3	0.285	0.382788	0.1362	0.4425	0.3184	0.6074	0.317	0.11	0.42	0.24	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.629764	NA	NA	NA	NA	NA	0.283	NA	3.8638
1266	3	3189060	3189060	G	A	intronic	TRNT1	NA	NA	NA	intronic	ENSG00000072756	NA	NA	NA	NA	NA	3p26.2	NA	NA	NA	NA	rs2306767	0.15	0.15	0.115	0.15615	0.1362	0.0506	0.2147	0.2239	0.1524	0.15	0.05	0.22	0.23	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.313137	NA	NA	NA	NA	NA	NA	NA	3.8638
1266	3	14763381	14763381	T	A	intronic	C3orf20	NA	NA	NA	intronic	ENSG00000131379	NA	NA	NA	NA	NA	3p25.1	NA	NA	NA	NA	rs78080902	0.08	0.08	0.087	0.067492	0.1362	0.0446	0.0793	0.0076	0.093	0.13	0.06	0.09	0.02	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.077665	2.077665	NA	NA	NA	NA	0.13	NA	3.8638
1266	3	183801709	183801709	C	T	intergenic	HTR3C,HTR3E	dist=23248;dist=13143	NA	NA	ncRNA_exonic	ENSG00000233576	NA	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs62285842	0.08	0.08	0.067	0.0852636	0.1362	0.0159	0.0692	0.0643	0.1442	0.14	0.02	0.07	0.04	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.003221	NA	NA	NA	NA	NA	0.051	NA	3.8638
1266	7	1478407	1478407	G	A	intronic	MICALL2	NA	NA	NA	intronic	ENSG00000164877	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs4307248	0.17	0.17	0.15	0.16853	0.1362	0.0288	0.281	0.2723	0.1258	0.14	0.04	0.28	0.27	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.620362	NA	NA	NA	NA	NA	0.21	NA	3.8638
1266	7	38533972	38533972	A	C	intronic	AMPH	NA	NA	NA	intronic	ENSG00000078053	NA	NA	NA	NA	NA	7p14.1	NA	NA	NA	NA	rs3735089	0.11	0.11	0.105	0.0882588	0.1362	0.1567	0.1066	0.003	0.0706	0.13	0.17	0.1	NA	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.555695	NA	NA	NA	NA	NA	0.043	NA	3.8638
1266	13	103279589	103279589	C	G	intronic	TPP2	NA	NA	NA	intronic	ENSG00000134900	NA	NA	NA	NA	NA	13q33.1	NA	NA	NA	NA	rs16960258	0.16	0.16	0.163	0.169529	0.1362	0.1349	0.1081	0.2761	0.1391	0.13	0.13	0.13	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.298906	NA	NA	NA	NA	NA	0.116	NA	3.8638
1266	15	34638342	34638342	G	T	intronic	NUTM1	NA	NA	NA	intronic	ENSG00000184507	NA	NA	NA	NA	NA	15q14	NA	NA	NA	NA	rs12592913	0.2	0.2	0.191	0.19349	0.1362	0.3284	0.1801	0.1286	0.2106	0.14	0.35	0.17	0.14	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.059917	NA	NA	NA	NA	ID=COSN164892;OCCURENCE=1(NS)	0.109	NA	3.8638
1266	16	57110635	57110635	C	T	intronic	NLRC5	NA	NA	NA	intronic	ENSG00000140853	NA	NA	NA	NA	NA	16q13	NA	NA	NA	NA	rs10500405	0.16	0.16	0.173	0.163538	0.1362	0.0456	0.1023	0.3343	0.1258	0.14	0.05	0.12	0.34	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.176337	NA	NA	NA	NA	NA	0.181	NA	3.8638
1266	6	160888084	160888084	G	A	ncRNA_intronic	LPAL2	NA	NA	NA	ncRNA_intronic	ENSG00000213071	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs55873330	NA	NA	0.433	0.889776	0.8032	0.999	0.8127	0.8933	0.9162	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.056451	NA	NA	NA	NA	NA	NA	NA	3.8634666
1266	8	1857432	1857432	G	A	intronic	ARHGEF10	NA	NA	NA	intronic	ENSG00000104728	NA	NA	NA	NA	NA	8p23.3	NA	NA	NA	NA	rs117235646	0.03	0.03	0.024	0.0181709	0.0626	NA	0.0303	0.0023	0.0041	0.06	NA	0.04	NA	0.0307	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.271176	NA	NA	0.043256	0.007944	NA	0.007	NA	3.863444
1266	22	46765025	46765025	G	A	intronic	CELSR1	NA	NA	NA	intronic	ENSG00000075275	NA	NA	NA	NA	NA	22q13.31	NA	NA	NA	NA	rs112949305	0.03	0.03	0.008	0.0203674	0.0517	NA	0.0331	0.0083	0.0164	0.04	NA	0.04	0.02	0.0348	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.247252	NA	NA	0.050116	0.011121	NA	0.029	NA	3.863384
1266	9	103015184	103015184	T	C	intronic	INVS	NA	NA	NA	intronic	ENSG00000119509	NA	NA	NA	NA	NA	9q31.1	NA	NA	NA	NA	rs2245216	0.24	0.24	0.206	0.210463	0.4175	0.1438	0.2305	0.1089	0.1892	0.42	0.11	0.27	0.11	0.3224	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.044115	NA	NA	0.396744	0.139809	ID=COSM150650;OCCURENCE=1(stomach)	0.261	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000081626.1;CLNDSDB=.;CLNDSDBID=.	3.863356
1266	1	16351206	16351206	C	T	intronic	CLCNKA	NA	NA	NA	intronic	ENSG00000186510	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs9442215	0.08	0.08	0.092	0.107428	0.0706	0.0992	0.062	0.1248	0.1626	0.07	0.07	0.06	0.13	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.492913	NA	NA	0.066047	0.109018	NA	0.072	NA	3.863353
1266	14	78399867	78399867	T	C	UTR3	ADCK1	NM_020421:c.*133T>C,NM_001142545:c.*133T>C	NA	NA	UTR3	ENSG00000063761	ENST00000238561:c.*133T>C,ENST00000341211:c.*133T>C	NA	NA	NA	NA	14q24.3	NA	NA	NA	NA	rs3087972	0.49	0.49	0.51	0.481629	0.4702	0.4315	0.3242	0.6944	0.3691	0.48	0.41	0.35	0.7	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.083	NA	NA	NA	NA	NA	0.529	NA	3.8631334
1266	16	4790273	4790273	G	A	exonic	C16orf71	NA	synonymous SNV	C16orf71:NM_139170:exon4:c.G396A:p.E132E	exonic	ENSG00000166246	NA	synonymous SNV	ENSG00000166246:ENST00000299320:exon4:c.G396A:p.E132E,ENSG00000166246:ENST00000586724:exon4:c.G396A:p.E132E,ENSG00000166246:ENST00000590191:exon4:c.G438A:p.E146E	NA	NA	16p13.3	NA	NA	NA	NA	rs859305	0.6	0.6	0.592	0.552716	0.6044	0.6806	0.5548	0.4644	0.4857	0.6	0.71	0.54	0.5	0.5847	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.14181	NA	NA	0.614535	0.517296	NA	0.558	NA	3.8630316
1266	12	94653227	94653227	T	C	intronic	PLXNC1	NA	NA	NA	intronic	ENSG00000136040	NA	NA	NA	Score=329;Name=lod=29	NA	12q22	NA	NA	NA	NA	rs2306664	0.55	0.55	0.535	0.548123	0.5855	0.4524	0.5793	0.6006	0.5153	0.58	0.45	0.57	0.6	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.757374	1.757374	NA	0.55154	0.642341	NA	0.478	NA	3.86296
1266	9	18639455	18639455	A	G	intronic	ADAMTSL1	NA	NA	NA	intronic	ENSG00000178031	NA	NA	NA	NA	NA	9p22.1	NA	NA	NA	NA	rs702206	0.06	0.06	0.061	0.0626997	0.0497	NA	0.0432	0.1755	0.002	0.05	NA	0.04	0.16	0.0451	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.842447	NA	NA	0.042249	0.16069	NA	0.051	NA	3.862951
1266	1	236389926	236389926	T	C	intronic	ERO1LB	NA	NA	NA	intronic	ENSG00000086619	NA	NA	NA	NA	NA	1q42.3	NA	NA	NA	NA	rs10924789	0.15	0.15	0.152	0.14377	0.0318	0.373	0.0778	0.1006	0.1278	0.03	0.4	0.06	0.1	0.0761	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.307874	NA	NA	0.0292	0.090164	NA	0.101	NA	3.8629
1266	1	151755284	151755284	C	G	intronic	TDRKH	NA	NA	NA	intronic	ENSG00000182134	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs6681093	0.2	0.2	0.191	0.194688	0.1372	0.121	0.1499	0.3812	0.1094	0.14	0.12	0.16	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.678953	NA	NA	NA	NA	NA	0.094	NA	3.8628
1266	3	125775061	125775061	C	T	intronic	SLC41A3	NA	NA	NA	intronic	ENSG00000114544	NA	NA	NA	NA	NA	3q21.2	NA	NA	NA	NA	rs78137633	0.07	0.07	0.058	0.0529153	0.1372	0.001	0.0937	0.0061	0.0542	0.14	NA	0.1	0.01	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.858221	NA	NA	NA	NA	NA	0.065	NA	3.8628
1266	4	110451678	110451678	C	T	intronic	SEC24B	NA	NA	NA	intronic	ENSG00000138802	NA	NA	NA	NA	NA	4q25	NA	NA	NA	NA	rs9994676	0.27	0.27	0.303	0.320887	0.1372	0.127	0.1225	0.8169	0.18	0.14	0.09	0.12	0.8	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.455181	NA	NA	NA	NA	NA	0.435	NA	3.8628
1266	4	182444131	182444131	A	G	intergenic	LINC00290,MGC45800	dist=363829;dist=616028	NA	NA	ncRNA_exonic	ENSG00000225356	NA	NA	NA	NA	NA	4q34.3	NA	NA	NA	NA	rs11939305	0.13	0.13	0.13	0.123003	0.1372	0.1964	0.1052	0.0605	0.1299	0.15	0.19	0.12	0.07	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.283606	NA	NA	NA	NA	NA	0.08	NA	3.8628
1266	5	149199889	149199889	G	A	intronic	PPARGC1B	NA	NA	NA	intronic	ENSG00000155846	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs32589	0.14	0.14	0.142	0.166733	0.1372	0.0873	0.0836	0.2549	0.2188	0.13	0.08	0.09	0.26	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.589419	NA	NA	NA	NA	NA	0.167	NA	3.8628
1266	7	104715018	104715018	A	G	intronic	MLL5	NA	NA	NA	intronic	ENSG00000005483	NA	NA	NA	NA	NA	7q22.3	NA	NA	NA	NA	rs9641341	0.4	0.4	0.446	0.387181	0.1372	0.6329	0.245	0.6006	0.2035	0.12	0.69	0.25	0.6	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.684808	NA	NA	NA	NA	NA	0.449	NA	3.8628
1266	8	29886141	29886141	G	C	intergenic	MIR3148,MIR548O2	dist=71277;dist=34117	NA	NA	ncRNA_exonic	ENSG00000254013	NA	NA	NA	NA	NA	8p12	NA	NA	NA	NA	rs17567833	0.06	0.06	0.066	0.0676917	0.1372	0.002	0.0548	0.0333	0.1196	0.14	NA	0.04	0.03	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.290314	NA	NA	NA	NA	NA	0.058	NA	3.8628
1266	9	104390423	104390423	C	T	intronic	GRIN3A	NA	NA	NA	intronic	ENSG00000198785	NA	NA	NA	NA	NA	9q31.1	NA	NA	NA	NA	rs1004362	0.16	0.16	0.138	0.146565	0.1372	0.2361	0.1599	0.0719	0.1554	0.13	0.24	0.18	0.08	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.188878	NA	NA	NA	NA	NA	0.167	NA	3.8628
1266	12	2018987	2018987	A	G	intronic	CACNA2D4	NA	NA	NA	intronic	ENSG00000151062	NA	NA	NA	NA	NA	12p13.33	NA	NA	NA	NA	rs34288687	0.25	0.25	0.218	0.235823	0.1372	0.5228	0.1671	0.0809	0.2996	0.13	0.57	0.17	0.12	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.728956	NA	NA	NA	NA	NA	0.254	NA	3.8628
1266	12	42853520	42853520	A	G	UTR3	PRICKLE1	NM_153026:c.*91T>C,NM_001144882:c.*91T>C,NM_001144883:c.*91T>C,NM_001144881:c.*91T>C	NA	NA	ncRNA_exonic	ENSG00000257225	NA	NA	NA	NA	NA	12q12	NA	NA	NA	NA	rs1043652	0.68	0.68	0.695	0.721046	0.6372	0.744	0.6225	0.7943	0.7546	0.64	0.7	0.58	0.78	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.669062	1.669062	NA	NA	NA	NA	0.732	NA	3.8628
1266	18	33269267	33269267	A	C	intronic	GALNT1	NA	NA	NA	intronic	ENSG00000141429	NA	NA	NA	NA	NA	18q12.2	NA	NA	NA	NA	rs3737382	0.09	0.09	NA	0.10643	0.0517	0.0585	0.0865	0.2179	0.0757	0.06	0.07	0.09	0.18	0.0855	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.84467	NA	NA	NA	NA	NA	0.08	NA	3.8628
1266	21	43829346	43829346	C	G	intronic	UBASH3A	NA	NA	NA	intronic	ENSG00000160185	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs2277802	0.14	0.14	0.132	0.150559	0.1372	0.0952	0.268	0.1324	0.1626	0.13	0.08	0.24	0.14	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.071919	NA	NA	NA	NA	NA	0.196	NA	3.8628
1266	2	33586610	33586610	A	G	intronic	LTBP1	NA	NA	NA	intronic	ENSG00000049323	NA	NA	NA	NA	NA	2p22.3	NA	NA	NA	NA	rs77815980	0.02	0.02	0.017	0.0251597	0.0477	0.001	0.0461	0.0023	0.0429	0.05	NA	0.02	0.002	0.0444	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.992027	NA	NA	0.045116	0.009305	NA	NA	NA	3.862784
1266	1	156352351	156352351	G	A	intronic	RHBG	NA	NA	NA	UTR3	ENSG00000132677	ENST00000537040:c.*282G>A	NA	NA	NA	NA	1q22	NA	NA	NA	NA	rs1408828	0.36	0.36	0.355	0.349641	0.3042	0.3542	0.4006	0.3949	0.2945	0.31	0.35	0.43	0.39	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.148338	NA	NA	NA	NA	NA	0.471	NA	3.8624667
1266	6	36931162	36931162	A	G	exonic	PI16	NA	synonymous SNV	PI16:NM_153370:exon5:c.A1044G:p.E348E,PI16:NM_001199159:exon6:c.A1044G:p.E348E	exonic	ENSG00000164530	NA	synonymous SNV	ENSG00000164530:ENST00000373674:exon5:c.A1044G:p.E348E	NA	NA	6p21.2	NA	NA	NA	NA	rs2296934	0.62	0.62	0.588	0.598442	0.6143	0.4871	0.7205	0.6256	0.5736	0.62	0.54	0.7	0.66	0.5943	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.363737	NA	NA	0.596047	0.607354	ID=COSM1131883;OCCURENCE=1(prostate)	0.565	NA	3.8620196
1266	19	12014820	12014820	C	G	intronic	ZNF69	NA	NA	NA	intronic	ENSG00000198429	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs28588743	0.09	0.09	0.097	0.111422	0.0437	0.0079	0.0519	0.3079	0.0644	0.03	0.01	0.06	0.32	0.0569	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.796092	NA	NA	0.037386	0.2797	NA	0.08	NA	3.862014
1266	21	44430139	44430139	T	C	intronic	PKNOX1	NA	NA	NA	intronic	ENSG00000160199	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs17178939	0.02	0.02	0.02	0.0147764	0.0467	NA	0.0086	0.0023	0.0184	0.05	NA	0.01	0.002	0.0385	0.053	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.119462	NA	NA	0.052907	0.007717	NA	0.014	NA	3.861893
1266	22	46668352	46668352	A	G	intronic	TTC38	NA	NA	NA	intronic	ENSG00000075234	NA	NA	NA	NA	NA	22q13.31	NA	NA	NA	NA	rs73177060	0.13	0.13	0.134	0.155551	0.0358	NA	0.062	0.5068	0.0307	0.02	NA	0.06	0.49	0.0672	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.485562	NA	NA	0.035134	0.420358	NA	0.217	NA	3.861866
1266	1	35926150	35926150	T	C	intronic	KIAA0319L	NA	NA	NA	intronic	ENSG00000142687	NA	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	rs1768560	0.54	0.54	0.575	0.55631	0.1382	0.7738	0.4481	0.9478	0.3098	0.13	0.8	0.42	0.95	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.080943	NA	NA	NA	NA	NA	0.449	NA	3.8618
1266	2	15746220	15746220	C	T	intronic	DDX1	NA	NA	NA	intronic	ENSG00000079785	NA	NA	NA	NA	NA	2p24.3	NA	NA	NA	NA	rs41264195	0.18	0.18	0.18	0.167133	0.1382	0.373	0.111	0.0295	0.2106	0.15	0.39	0.13	0.03	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.997798	NA	NA	NA	NA	NA	0.152	NA	3.8618
1266	2	165586346	165586346	A	T	intronic	COBLL1	NA	NA	NA	intronic	ENSG00000082438	NA	NA	NA	NA	NA	2q24.3	NA	NA	NA	NA	rs28651164	0.1	0.1	0.098	0.0994409	0.1382	0.003	0.085	0.1573	0.091	0.13	NA	0.1	0.16	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.720633	1.720633	NA	NA	NA	NA	0.08	NA	3.8618
1266	3	4703657	4703657	T	A	intronic	ITPR1	NA	NA	NA	intronic	ENSG00000150995	NA	NA	NA	NA	NA	3p26.1	NA	NA	NA	NA	rs6801737	0.15	0.15	0.103	0.165136	0.1382	0.1806	0.1945	0.0242	0.3466	0.17	0.17	0.22	0.03	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.843211	1.843211	NA	NA	NA	NA	0.072	NA	3.8618
1266	4	100232624	100232624	T	G	intronic	ADH1B	NA	NA	NA	intronic	ENSG00000196616	NA	NA	NA	NA	NA	4q23	NA	NA	NA	NA	rs13133908	0.06	0.06	0.062	0.0441294	0.1382	NA	0.0706	0.0015	0.0317	0.14	NA	0.08	NA	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.350854	NA	NA	NA	NA	NA	0.036	NA	3.8618
1266	5	96116286	96116286	A	G	intronic	ERAP1	NA	NA	NA	intronic	ENSG00000164307	NA	NA	NA	NA	NA	5q15	NA	NA	NA	NA	rs67140788	0.06	0.06	0.045	0.0599042	0.1382	NA	0.1153	0.0053	0.0757	0.13	NA	0.12	0.01	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.132785	NA	NA	NA	NA	NA	0.152	NA	3.8618
1266	5	118347119	118347119	C	G	intergenic	DTWD2,DMXL1	dist=22879;dist=59965	NA	NA	ncRNA_intronic	ENSG00000249494	NA	NA	NA	NA	NA	5q23.1	NA	NA	NA	NA	rs299215	0.27	0.27	0.276	0.244409	0.1382	0.4802	0.3501	0.1846	0.1166	0.14	0.49	0.27	0.19	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.64432	NA	NA	NA	NA	NA	0.181	NA	3.8618
1266	5	147261484	147261484	C	T	intronic	SCGB3A2	NA	NA	NA	intronic	ENSG00000164265	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs3910207	0.2	0.2	0.18	0.199281	0.1382	0.1528	0.3271	0.2814	0.1084	0.14	0.14	0.29	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.174743	NA	NA	NA	NA	NA	0.159	NA	3.8618
1266	6	38781749	38781749	C	T	intronic	DNAH8	NA	NA	NA	intronic	ENSG00000124721	NA	NA	NA	NA	NA	6p21.2	NA	NA	NA	NA	rs12524938	0.11	0.11	0.078	0.0876597	0.1382	0.0198	0.2349	0.0598	0.0389	0.14	0.02	0.22	0.06	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.187077	NA	NA	NA	NA	NA	0.196	NA	3.8618
1266	11	122666790	122666790	C	T	intronic	UBASH3B	NA	NA	NA	intronic	ENSG00000154127	NA	NA	NA	NA	NA	11q24.1	NA	NA	NA	NA	rs4936746	0.14	0.14	0.132	0.132987	0.1382	0.0903	0.2305	0.1679	0.0552	0.13	0.1	0.23	0.15	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.128488	NA	NA	NA	NA	NA	0.058	NA	3.8618
1266	13	103486912	103486912	C	T	intronic	BIVM,BIVM-ERCC5	NA	NA	NA	intronic	ENSG00000134897,ENSG00000270181	NA	NA	NA	NA	NA	13q33.1	NA	NA	NA	NA	rs76812904	0.05	0.05	0.034	0.0445288	0.0537	0.0546	0.0231	0.034	0.0542	0.06	0.06	0.04	0.04	0.0444	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.485822	NA	NA	0.040126	0.042442	NA	0.022	NA	3.861774
1266	6	39046871	39046871	C	T	intronic	GLP1R	NA	NA	NA	intronic	ENSG00000112164	NA	NA	NA	NA	NA	6p21.2	NA	NA	NA	NA	rs761386	0.1	0.1	0.077	0.0980431	0.0338	0.2024	0.183	0.0333	0.0838	0.03	0.21	0.16	0.04	0.0755	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.201277	NA	NA	0.028953	0.030867	NA	0.087	NA	3.861747
1266	14	76549752	76549752	G	A	intronic	IFT43	NA	NA	NA	intronic	ENSG00000119650	NA	NA	NA	NA	NA	14q24.3	NA	NA	Name=2	NA	rs8536	0.32	0.32	0.288	0.295527	0.3946	0.3968	0.3732	0.0605	0.3517	0.42	0.39	0.35	0.08	0.3584	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.071598	NA	NA	0.385465	0.113709	NA	0.326	NA	3.861535
1266	7	102616469	102616469	G	A	intronic	FBXL13	NA	NA	NA	ncRNA_intronic	ENSG00000230257	NA	NA	NA	NA	NA	7q22.1	NA	Name=E2F6_(H-50),HEY1	Name=2	NA	rs2228687	0.78	0.78	0.747	0.778554	0.8201	0.8413	0.8329	0.5787	0.9029	0.81	0.86	0.8	0.61	0.827	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.597805	NA	NA	0.824976	0.649975	NA	0.783	NA	3.8612573
1266	17	7499349	7499349	G	A	intronic	FXR2	NA	NA	NA	intronic	ENSG00000129245	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs16956822	0.09	0.09	0.07	0.115415	0.0288	0.2381	0.2651	0.031	0.0859	0.03	0.18	0.15	0.02	0.0808	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.364022	1.364022	NA	0.029152	0.033865	NA	0.036	NA	3.861248
1266	11	5373646	5373646	T	C	exonic	OR51B6	NA	synonymous SNV	OR51B6:NM_001004750:exon1:c.T909C:p.R303R	exonic	ENSG00000176239	NA	synonymous SNV	ENSG00000176239:ENST00000380219:exon1:c.T909C:p.R303R	NA	NA	11p15.4	NA	NA	NA	NA	rs5024041	0.58	0.58	0.577	0.603634	0.6054	0.5466	0.5692	0.5764	0.7219	0.59	0.55	0.6	0.58	0.6038	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.051441	NA	NA	0.596275	0.579773	NA	0.587	NA	3.8611916
1266	3	4403818	4403818	T	C	UTR3	SUMF1	NM_001164674:c.*10A>G,NM_001164675:c.*10A>G,NM_182760:c.*10A>G	NA	NA	UTR3	ENSG00000144455	ENST00000272902:c.*10A>G,ENST00000383843:c.*10A>G,ENST00000458465:c.*10A>G,ENST00000405420:c.*10A>G	NA	NA	NA	NA	3p26.1	NA	NA	NA	NA	rs35083095	0.43	0.43	0.416	0.432109	0.5129	0.5873	0.5173	0.1891	0.4571	0.46	0.54	0.48	0.21	0.4936	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.207335	NA	NA	0.465698	0.20699	NA	NA	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000082712.1;CLNDSDB=.;CLNDSDBID=.	3.8611354
1266	22	32617062	32617062	G	A	intronic	SLC5A4	NA	NA	NA	ncRNA_intronic	ENSG00000242082	NA	NA	NA	NA	NA	22q12.3	NA	NA	NA	NA	rs5998317	0.46	0.46	0.481	0.503594	0.4722	0.1607	0.3703	0.9191	0.4223	0.46	0.14	0.38	0.89	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.047551	NA	NA	NA	NA	NA	0.536	NA	3.8611333
1266	7	139662072	139662072	T	C	intronic	TBXAS1	NA	NA	NA	intronic	ENSG00000059377	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs2072179	0.07	0.07	0.061	0.0686901	0.0447	0.1528	0.1167	0.0038	0.0603	0.05	0.13	0.1	0.01	0.0546	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.374651	NA	NA	0.039651	0.00749	NA	0.087	NA	3.861049
1266	6	30228416	30228416	T	C	ncRNA_intronic	HCG17,HLA-L	NA	NA	NA	ncRNA_intronic	ENSG00000243753,ENSG00000270604	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs2523750	0.34	0.34	0.276	0.397764	0.2465	0.5308	0.4496	0.3003	0.5112	0.22	0.48	0.4	0.3	0.3148	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.671088	NA	NA	0.244461	0.275862	NA	0.37	NA	3.8609056
1266	19	56423692	56423692	C	T	exonic	NLRP13	NA	synonymous SNV	NLRP13:NM_176810:exon5:c.G1491A:p.T497T	exonic	ENSG00000173572	NA	synonymous SNV	ENSG00000173572:ENST00000342929:exon5:c.G1491A:p.T497T,ENSG00000173572:ENST00000588751:exon5:c.G1491A:p.T497T	NA	NA	19q13.43	NA	NA	NA	NA	rs304000	0.64	0.64	0.645	0.661342	0.5915	0.7302	0.5043	0.733	0.6769	0.58	0.71	0.53	0.72	0.6052	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.404141	NA	NA	0.60907	0.706537	NA	0.732	NA	3.8608966
1266	1	210273886	210273886	A	T	intronic	SYT14	NA	NA	NA	intronic	ENSG00000143469	NA	NA	NA	NA	NA	1q32.2	NA	NA	NA	NA	rs2494187	0.08	0.08	0.064	0.0738818	0.1392	0.0486	0.0677	0.0083	0.1258	0.14	0.06	0.09	0.02	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.426247	NA	NA	NA	NA	NA	0.138	NA	3.8608
1266	2	86712731	86712731	G	C	intronic	KDM3A	NA	NA	NA	intronic	ENSG00000115548	NA	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs72932310	0.14	0.14	0.139	0.132188	0.1392	NA	0.0865	0.3328	0.0225	0.14	NA	0.09	0.34	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.005994	NA	NA	NA	NA	NA	0.196	NA	3.8608
1266	2	203200960	203200960	G	A	intergenic	NOP58,BMPR2	dist=32576;dist=40090	NA	NA	ncRNA_exonic	ENSG00000226261	NA	NA	NA	NA	NA	2q33.1	NA	NA	NA	NA	rs113188021	0.11	0.11	0.077	0.133586	0.1392	0.123	0.1484	0.0386	0.2566	0.14	0.1	0.15	0.05	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.295662	NA	NA	NA	NA	NA	0.065	NA	3.8608
1266	3	10077023	10077023	T	C	intronic	FANCD2	NA	NA	NA	intronic	ENSG00000144554	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs17032277	0.18	0.18	0.186	0.182109	0.1392	0.0486	0.1614	0.3623	0.135	0.15	0.07	0.18	0.38	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.764309	NA	NA	NA	NA	NA	0.348	NA	3.8608
1266	4	81002230	81002230	G	A	intergenic	ANTXR2,PRDM8	dist=7753;dist=104194	NA	NA	ncRNA_exonic	ENSG00000236530	NA	NA	NA	NA	NA	4q21.21	NA	NA	NA	NA	rs2867697	0.45	0.45	0.459	0.495607	0.1392	0.6369	0.3314	0.8011	0.4202	0.13	0.65	0.31	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.458828	NA	NA	NA	NA	NA	0.536	NA	3.8608
1266	5	7865891	7865891	C	A	intronic	FASTKD3	NA	NA	NA	intronic	ENSG00000124279	NA	NA	NA	NA	NA	5p15.31	NA	NA	NA	NA	rs16879258	0.11	0.11	0.109	0.114417	0.1392	0.0486	0.1182	0.174	0.0736	0.13	0.03	0.12	0.17	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.504796	NA	NA	NA	NA	NA	0.123	NA	3.8608
1266	13	111335319	111335319	C	T	intronic	CARS2	NA	NA	NA	intronic	ENSG00000134905	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs61971611	0.09	0.09	0.091	0.0680911	0.1392	0.0813	0.062	0.0197	0.0511	0.14	0.09	0.07	0.02	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.853505	NA	NA	NA	NA	NA	0.051	NA	3.8608
1266	14	23886264	23886264	C	T	intronic	MYH7	NA	NA	NA	intronic	ENSG00000092054	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs3729825	0.14	0.14	0.15	0.136981	0.1392	0.002	0.0893	0.3419	0.0307	0.13	0.0017	0.11	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.831108	NA	NA	NA	NA	NA	0.261	NA	3.8608
1266	16	74877844	74877844	G	A	intergenic	FA2H,WDR59	dist=69115;dist=29627	NA	NA	downstream	ENSG00000261458	NA	NA	NA	NA	NA	16q23.1	NA	NA	Name=13	NA	rs7186814	0.67	0.67	0.64	0.671526	0.6392	0.8522	0.7435	0.4894	0.7137	0.65	0.86	0.71	0.45	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.083166	NA	NA	NA	NA	NA	0.674	NA	3.8608
1266	19	5707628	5707628	G	A	intronic	LONP1	NA	NA	NA	intronic	ENSG00000196365	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs3737237	0.09	0.09	0.086	0.0896565	0.1392	0.0536	0.1686	0.0136	0.1227	0.13	0.07	0.15	0.02	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.667261	NA	NA	NA	NA	NA	0.101	NA	3.8608
1266	20	2473587	2473587	A	T	intronic	ZNF343	NA	NA	NA	intronic	ENSG00000088876,ENSG00000256566	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs41308639	0.13	0.13	0.137	0.141573	0.1392	0.1042	0.1023	0.1641	0.18	0.14	0.11	0.1	0.18	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.322308	NA	NA	NA	NA	NA	0.138	NA	3.8608
1266	5	140683265	140683265	G	A	exonic	SLC25A2	NA	synonymous SNV	SLC25A2:NM_031947:exon1:c.C168T:p.A56A	exonic	ENSG00000120329	NA	synonymous SNV	ENSG00000120329:ENST00000239451:exon1:c.C168T:p.A56A	NA	NA	5q31.3	NA	NA	NA	NA	rs11952797	0.53	0.53	0.519	0.515375	0.6123	0.5873	0.5317	0.3215	0.592	0.58	0.59	0.54	0.38	0.5802	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.368517	NA	NA	0.613372	0.351112	NA	0.464	NA	3.8607946
1266	22	46780621	46780621	G	C	intronic	CELSR1	NA	NA	NA	intronic	ENSG00000075275	NA	NA	NA	NA	NA	22q13.31	NA	NA	NA	NA	rs111348923	0.02	0.02	0.014	0.0183706	0.0507	NA	0.0288	0.0053	0.0143	0.04	NA	0.03	0.01	0.0366	0.052	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.683944	NA	NA	0.051977	0.009991	NA	0.022	NA	3.860723
1266	19	53158924	53158924	C	T	UTR5	ZNF83	NM_001242538:c.-41107G>A,NM_001242531:c.-41107G>A,NM_001277945:c.-41107G>A,NM_001277946:c.-41107G>A,NM_001277947:c.-41107G>A,NM_001277949:c.-41107G>A	NA	NA	UTR5	ENSG00000167766	ENST00000600714:c.-20591G>A,ENST00000601257:c.-20591G>A,ENST00000594682:c.-20591G>A,ENST00000598536:c.-20591G>A	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs3745105	0.59	0.59	0.553	0.577676	0.4732	0.7044	0.6412	0.6203	0.4519	0.48	0.72	0.57	0.62	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.526032	NA	NA	NA	NA	NA	0.486	NA	3.8601334
1266	1	55518093	55518093	G	A	intronic	PCSK9	NA	NA	NA	intronic	ENSG00000169174	NA	NA	NA	NA	NA	1p32.3	NA	NA	NA	NA	rs11800243	0.04	0.04	0.038	0.0391374	0.0527	0.0268	0.0403	0.0257	0.0552	0.05	0.03	0.04	0.03	0.0424	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.208021	NA	NA	0.044767	0.047662	NA	0.022	NA	3.860133
1266	9	140846956	140846956	G	A	intronic	CACNA1B	NA	NA	NA	intronic	ENSG00000148408	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs41277867	0.19	0.19	0.178	0.192492	0.1402	0.4385	0.072	0.1067	0.1943	0.14	0.44	0.06	0.1	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.100767	NA	NA	NA	NA	NA	0.058	NA	3.8598
1266	12	48457339	48457339	A	C	intronic	SENP1	NA	NA	NA	intronic	ENSG00000079387	NA	NA	NA	NA	NA	12q13.11	NA	NA	NA	NA	rs3742075	0.19	0.19	0.198	0.189297	0.1402	0.1458	0.1052	0.3396	0.1411	0.14	0.18	0.1	0.34	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.243885	NA	NA	NA	NA	NA	0.246	NA	3.8598
1266	14	69529031	69529031	T	C	intronic	DCAF5	NA	NA	NA	intronic	ENSG00000139990	NA	NA	NA	NA	NA	14q24.1	NA	NA	NA	NA	rs72718277	0.07	0.07	0.054	0.081869	0.1402	0.002	0.085	0.0325	0.1687	0.12	NA	0.1	0.04	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.563679	NA	NA	NA	NA	NA	0.138	NA	3.8598
1266	14	100182082	100182082	T	C	intronic	CYP46A1	NA	NA	NA	intronic	ENSG00000036530	NA	NA	NA	NA	NA	14q32.2	NA	NA	NA	NA	rs3752957	0.15	0.15	0.123	0.138179	0.1402	0.1627	0.1888	0.0938	0.135	0.13	0.16	0.19	0.12	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.330674	NA	NA	NA	NA	NA	0.094	NA	3.8598
1266	15	48797124	48797124	T	A	intronic	FBN1	NA	NA	NA	intronic	ENSG00000166147	NA	NA	NA	NA	NA	15q21.1	NA	NA	NA	NA	rs35464791	0.1	0.1	0.081	0.101238	0.1402	0.123	0.111	0.0219	0.1391	0.14	0.11	0.12	0.02	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.878941	NA	NA	NA	NA	NA	0.051	NA	3.8598
1266	15	66850503	66850503	G	A	intronic	LCTL	NA	NA	NA	intronic	ENSG00000188501	NA	NA	NA	NA	NA	15q22.31	NA	NA	NA	NA	rs67124721	0.11	0.11	0.122	0.0910543	0.1402	0.0417	0.134	0.0772	0.0798	0.15	0.05	0.15	0.09	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.438865	NA	NA	NA	NA	NA	0.196	NA	3.8598
1266	18	70416119	70416119	T	C	intronic	NETO1	NA	NA	NA	intronic	ENSG00000166342	NA	NA	NA	NA	NA	18q22.3	NA	NA	NA	NA	rs11872857	0.11	0.11	0.112	0.126797	0.1402	0.0109	0.1066	0.1906	0.1605	0.13	0.01	0.11	0.2	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.236825	NA	NA	NA	NA	NA	0.203	NA	3.8598
1266	19	43453968	43453968	G	T	intergenic	PSG7,PSG11	dist=12638;dist=57841	NA	NA	ncRNA_intronic	ENSG00000227349	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs10401410	0.28	0.28	0.246	0.326278	0.1402	0.4206	0.2147	0.4244	0.3671	0.14	0.41	0.17	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.286146	NA	NA	NA	NA	NA	0.029	NA	3.8598
1266	19	43453970	43453970	C	T	intergenic	PSG7,PSG11	dist=12640;dist=57839	NA	NA	ncRNA_intronic	ENSG00000227349	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs55698945	0.23	0.23	0.189	0.269968	0.1402	0.4206	0.1931	0.2224	0.3671	0.14	0.41	0.14	0.22	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.349639	NA	NA	NA	NA	NA	NA	NA	3.8598
1266	22	24891355	24891355	A	T	UTR5	UPB1	NM_016327:c.-17A>T	NA	NA	UTR5	ENSG00000100024	ENST00000413389:c.-49A>T,ENST00000415388:c.-17A>T,ENST00000326010:c.-17A>T,ENST00000382760:c.-17A>T	NA	NA	NA	NA	22q11.23	NA	NA	NA	NA	rs2070475	0.15	0.15	0.13	0.15595	0.172	0.3085	0.1599	0.0083	0.1789	0.17	0.25	0.14	0.01	0.1541	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.084999	NA	NA	0.147476	0.035633	NA	0.087	NA	3.8597574
1266	20	58466998	58466998	T	A	intronic	SYCP2	NA	NA	NA	intronic	ENSG00000196074	NA	NA	NA	NA	NA	20q13.33	NA	NA	NA	NA	rs34313076	0.02	0.02	0.021	0.0235623	0.0417	0.001	0.0231	0.0008	0.0593	0.04	0.0017	0.04	0.002	0.0445	0.054	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.169064	NA	NA	0.054108	0.011364	NA	0.022	NA	3.859692
1266	2	36806051	36806051	A	G	intronic	FEZ2	NA	NA	NA	intronic	ENSG00000171055	NA	NA	NA	NA	NA	2p22.2	NA	Name=STAT3	NA	NA	rs2072533	0.49	0.49	0.517	0.475839	0.3966	0.6478	0.3357	0.5862	0.3303	0.4	0.62	0.32	0.6	0.3889	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.287374	NA	NA	0.354913	0.533693	ID=COSN166063;OCCURENCE=1(breast)	0.558	NA	3.859587
1266	8	101163658	101163658	T	C	intronic	POLR2K	NA	NA	NA	intronic	ENSG00000147669	NA	NA	NA	NA	NA	8q22.2	NA	NA	NA	NA	rs3752833	0.05	0.05	0.04	0.043131	0.0507	0.0565	0.085	0.0015	0.0481	0.05	0.06	0.07	0.0041	0.0475	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.280774	3.280774	NA	0.042326	0.008398	NA	0.022	NA	3.859474
1266	1	55518287	55518287	G	A	intronic	PCSK9	NA	NA	NA	intronic	ENSG00000169174	NA	NA	NA	NA	NA	1p32.3	NA	NA	NA	NA	rs11800265	0.04	0.04	0.034	0.0391374	0.0537	0.0298	0.0418	0.0212	0.0562	0.05	0.04	0.04	0.03	0.0424	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.173437	NA	NA	0.044429	0.040682	NA	0.014	NA	3.859471
1266	6	32805306	32805306	C	T	intronic	TAP2	NA	NA	NA	intronic	ENSG00000204267,ENSG00000250264	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs2071467	0.07	0.07	0.053	0.0654952	0.0417	0.1538	0.0548	0.0083	0.0838	0.05	0.15	0.06	0.01	0.0619	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.258035	NA	NA	0.036977	0.011802	NA	0.065	NA	3.859423
1266	6	30229280	30229280	C	A	ncRNA_intronic	HCG17,HLA-L	NA	NA	NA	ncRNA_intronic	ENSG00000243753,ENSG00000270604	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs2508027	0.3	0.3	0.273	0.396166	0.2465	0.5308	0.4496	0.3003	0.5031	0.19	0.44	0.35	0.26	0.3149	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.271342	1.271342	NA	0.246032	0.278954	NA	NA	NA	3.8592346
1266	17	45821510	45821510	T	C	intronic	TBX21	NA	NA	NA	intronic	ENSG00000073861	NA	NA	NA	NA	NA	17q21.32	NA	NA	NA	NA	rs16946878	0.04	0.04	0.033	0.0377396	0.0398	NA	0.0548	0.0749	0.0123	0.03	NA	0.06	0.07	0.046	0.076	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.226823	NA	NA	0.055	0.07626	NA	0.014	NA	3.8592
1266	20	33342477	33342477	G	A	intronic	NCOA6	NA	NA	NA	intronic	ENSG00000198646	NA	NA	NA	NA	NA	20q11.22	NA	Name=MafK_(ab50322),EBF1_(C-8)	NA	NA	rs6087625	0.31	0.31	0.311	0.288938	0.3936	0.2639	0.2378	0.2065	0.3548	0.4	0.29	0.28	0.2	0.3562	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.572297	NA	NA	0.391047	0.251929	NA	0.399	NA	3.859153
1266	3	49866392	49866392	C	T	UTR3	TRAIP	NM_005879:c.*144G>A	NA	NA	UTR3	ENSG00000183763	ENST00000331456:c.*144G>A	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs1128535	0.39	0.39	0.415	0.418131	0.4742	0.1657	0.3559	0.6263	0.3834	0.46	0.17	0.34	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.519855	NA	NA	NA	NA	NA	0.362	NA	3.8591334
1266	1	156618768	156618768	T	G	intronic	BCAN	NA	NA	NA	ncRNA_intronic	ENSG00000229953	NA	NA	NA	NA	NA	1q23.1	NA	NA	NA	NA	rs4661209	0.54	0.54	0.579	0.610423	0.4742	0.4038	0.4669	0.8949	0.681	0.47	0.39	0.43	0.9	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.356937	NA	NA	NA	NA	NA	0.688	NA	3.8591333
1266	2	241537421	241537421	G	A	exonic	CAPN10	NA	synonymous SNV	CAPN10:NM_023085:exon8:c.G1395A:p.A465A,CAPN10:NM_023083:exon10:c.G1860A:p.A620A	exonic	ENSG00000142330	NA	synonymous SNV	ENSG00000142330:ENST00000352879:exon2:c.G258A:p.A86A,ENSG00000142330:ENST00000354082:exon8:c.G1395A:p.A465A,ENSG00000142330:ENST00000391984:exon10:c.G1860A:p.A620A,ENSG00000142330:ENST00000404753:exon10:c.G1860A:p.A620A	NA	NA	2q37.3	NA	NA	NA	NA	rs3749166	0.55	0.55	0.516	0.511781	0.6074	0.6488	0.5634	0.2897	0.5358	0.59	0.64	0.63	0.3	0.5811	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.827953	NA	NA	0.61907	0.315395	NA	0.507	NA	3.8590966
1266	9	140623027	140623027	C	T	intronic	EHMT1	NA	NA	NA	intronic	ENSG00000181090	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs3125782	0.11	0.11	0.139	0.133387	0.0408	0.002	0.0663	0.4365	0.002	0.04	0.0035	0.06	0.4	0.0617	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.887692	NA	NA	0.038488	0.384249	NA	0.167	NA	3.859012
1266	10	102783145	102783145	G	C	intronic	PDZD7	NA	NA	NA	UTR3	ENSG00000186862	ENST00000470414:c.*44C>G	NA	NA	NA	NA	10q24.31	NA	NA	NA	NA	rs3740496	0.21	0.21	0.216	0.229832	0.0775	0.1964	0.1816	0.5023	0.0869	0.08	0.23	0.14	0.47	0.1347	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.870371	NA	NA	0.095604	0.431911	NA	0.21	NA	3.8588627
1266	7	1524862	1524862	G	A	intronic	INTS1	NA	NA	NA	intronic	ENSG00000164880	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs111525228	0.04	0.04	0.03	0.043131	0.0477	0.0069	0.2017	0.0008	0.0204	0.05	0.0035	0.15	NA	0.0554	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.194211	NA	NA	0.038043	0.01182	NA	0.022	NA	3.858857
1266	6	30229281	30229281	C	T	ncRNA_intronic	HCG17,HLA-L	NA	NA	NA	ncRNA_intronic	ENSG00000243753,ENSG00000270604	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs2508026	0.3	0.3	0.267	0.397564	0.2465	0.5308	0.4496	0.3003	0.5102	0.19	0.44	0.35	0.26	0.3155	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.252042	1.252042	NA	0.245847	0.278954	NA	NA	NA	3.8588196
1266	3	10136150	10136150	C	T	intronic	FANCD2,FANCD2OS	NA	NA	NA	intronic	ENSG00000144554,ENSG00000163705	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs7610821	0.23	0.23	0.241	0.241214	0.1412	0.0675	0.1974	0.5144	0.1851	0.15	0.1	0.2	0.51	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.658174	NA	NA	NA	NA	NA	0.362	NA	3.8588
1266	9	138683575	138683575	T	C	intronic	KCNT1	NA	NA	NA	intronic	ENSG00000107147	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs41299048	0.15	0.15	0.136	0.178514	0.1412	0.1042	0.1772	0.2073	0.2556	0.14	0.1	0.17	0.2	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.183635	NA	NA	NA	NA	NA	0.217	NA	3.8588
1266	12	1016910	1016910	T	C	intronic	WNK1	NA	NA	NA	intronic	ENSG00000060237	NA	NA	NA	NA	NA	12p13.33	NA	NA	NA	NA	rs2277869	0.14	0.14	0.15	0.158147	0.1412	0.1081	0.2017	0.1657	0.1861	0.15	0.1	0.18	0.15	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.346092	3.346092	NA	NA	NA	NA	0.268	NA	3.8588
1266	17	38183090	38183090	G	T	intronic	MED24	NA	NA	NA	intronic	ENSG00000008838	NA	NA	NA	NA	NA	17q21.1	NA	Name=YY1_(C-20)	NA	NA	rs2302774	0.32	0.32	0.278	0.31869	0.3748	0.4226	0.4179	0.056	0.4387	0.37	0.41	0.43	0.07	0.3876	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.065272	NA	NA	0.378953	0.105992	NA	0.355	NA	3.858647
1266	11	62543960	62543960	T	C	intronic	TAF6L	NA	NA	NA	intronic	ENSG00000162227,ENSG00000168569	NA	NA	NA	NA	NA	11q12.3	NA	NA	NA	NA	rs567791	0.13	0.13	0.124	0.154752	0.0318	0.1548	0.049	0.3457	0.0982	0.03	0.14	0.05	0.32	0.0735	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.82784	2.82784	NA	0.036055	0.291231	NA	0.101	NA	3.858645
1266	19	14589417	14589417	A	T	intronic	GIPC1	NA	NA	NA	intronic	ENSG00000123159	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs75802787	0.07	0.07	0.063	0.0700879	0.0497	0.0308	0.1254	0.118	0.0276	0.04	0.03	0.11	0.12	0.0523	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.242634	NA	NA	0.039535	0.110304	NA	0.029	NA	3.858465
1266	1	224473849	224473849	A	C	intronic	NVL	NA	NA	NA	intronic	ENSG00000143748	NA	NA	NA	NA	NA	1q42.11	NA	NA	NA	NA	rs16846031	0.07	0.07	0.08	0.091853	0.0318	0.1131	0.0303	0.1619	0.0808	0.03	0.11	0.04	0.12	0.058	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.549275	NA	NA	0.051744	0.134589	NA	0.058	NA	3.858456
1266	19	19380596	19380596	G	T	intronic	TM6SF2	NA	NA	NA	ncRNA_intronic	ENSG00000267629	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs72999063	0.16	0.16	0.166	0.160343	0.168	0.0198	0.1268	0.295	0.1391	0.15	0.02	0.14	0.34	0.1507	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.488055	2.488055	NA	0.156265	0.275039	NA	0.246	NA	3.8583683
1266	3	137982718	137982718	T	G	intronic	ARMC8,NME9	NA	NA	NA	intronic	ENSG00000114098,ENSG00000181322	NA	NA	NA	NA	NA	3q22.3	Score=824;Name=V$EVI1_04	NA	NA	NA	rs939453	0.55	0.55	0.501	0.540136	0.5537	0.8234	0.6671	0.1505	0.6708	0.55	0.82	0.61	0.2	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.606114	2.606114	NA	0.587995	0.218931	NA	0.464	NA	3.858305
1266	6	30228938	30228938	T	C	ncRNA_intronic	HCG17,HLA-L	NA	NA	NA	ncRNA_intronic	ENSG00000243753,ENSG00000270604	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs2523747	0.34	0.34	0.301	0.397564	0.2465	0.5308	0.4496	0.3003	0.5102	0.22	0.48	0.41	0.3	0.3142	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.042987	NA	NA	0.247969	0.278623	NA	0.384	NA	3.8579976
1266	5	34810971	34810971	G	A	intronic	RAI14	NA	NA	NA	intronic	ENSG00000039560	NA	NA	NA	NA	NA	5p13.2	NA	NA	NA	NA	rs111531050	0.08	0.08	0.066	0.0742812	0.1421	0.0109	0.0951	0.0091	0.1431	0.15	0.01	0.12	0.01	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.994191	NA	NA	NA	NA	NA	0.065	NA	3.8579
1266	6	31246253	31246253	T	C	intergenic	HLA-C,HLA-B	dist=6340;dist=75396	NA	NA	ncRNA_exonic	ENSG00000214892	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs113056286	0.15	0.15	0.124	0.168331	0.1421	0.0694	0.1974	0.2428	0.1759	0.13	0.1	0.2	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.482229	1.482229	NA	NA	NA	NA	0.109	NA	3.8579
1266	10	98282160	98282160	A	G	intronic	TM9SF3	NA	NA	NA	intronic	ENSG00000077147	NA	NA	NA	NA	NA	10q24.1	NA	NA	NA	NA	rs17391197	0.08	0.08	0.078	0.0792732	0.1421	0.0149	0.072	0.056	0.1176	0.15	0.01	0.08	0.05	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.22294	NA	NA	NA	NA	NA	0.043	NA	3.8579
1266	11	47727590	47727590	A	C	intronic	AGBL2	NA	NA	NA	intronic	ENSG00000165923	NA	NA	NA	NA	NA	11p11.2	NA	NA	NA	NA	rs17791016	0.23	0.23	0.208	0.219848	0.1421	0.2946	0.1974	0.3048	0.1237	0.15	0.32	0.2	0.25	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.329949	NA	NA	NA	NA	NA	0.167	NA	3.8579
1266	11	130340682	130340682	G	A	intronic	ADAMTS15	NA	NA	NA	intronic	ENSG00000166106	NA	NA	NA	NA	NA	11q24.3	NA	NA	NA	NA	rs7926619	0.09	0.09	0.091	0.0798722	0.1421	0.0089	0.085	0.1067	0.0491	0.14	0.01	0.09	0.12	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.991791	NA	NA	NA	NA	NA	0.065	NA	3.8579
1266	16	21123188	21123188	C	T	intronic	DNAH3	NA	NA	NA	intronic	ENSG00000158486	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs62034958	0.09	0.09	0.087	0.0850639	0.1421	0.1131	0.085	0.0083	0.1012	0.13	0.12	0.09	0.01	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.894841	NA	NA	NA	NA	NA	0.087	NA	3.8579
1266	17	76129360	76129360	C	T	intronic	TMC8	NA	NA	NA	intronic	ENSG00000167895	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs9889313	0.18	0.18	0.2	0.195288	0.1421	0.1438	0.1196	0.3056	0.2076	0.14	0.15	0.15	0.3	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.77273	NA	NA	NA	NA	NA	0.152	NA	3.8579
1266	19	49398847	49398847	A	G	intronic	TULP2	NA	NA	NA	intronic	ENSG00000104804	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs56146968	0.07	0.07	0.056	0.0589058	0.1421	0.001	0.0677	0.0227	0.0757	0.14	0.0017	0.08	0.02	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.141503	NA	NA	NA	NA	NA	0.123	NA	3.8579
1266	19	49408943	49408943	T	C	intronic	NUCB1	NA	NA	NA	intronic	ENSG00000104805	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs73063523	0.06	0.06	0.048	0.0533147	0.1421	0.001	0.062	0.0045	0.0757	0.14	0.0017	0.07	0.01	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.302695	NA	NA	NA	NA	NA	0.116	NA	3.8579
1266	22	25255959	25255959	C	T	intronic	SGSM1	NA	NA	NA	intronic	ENSG00000167037	NA	NA	NA	NA	NA	22q11.23	NA	NA	NA	NA	rs139702	0.27	0.27	0.267	0.326677	0.1421	0.254	0.2378	0.5492	0.3538	0.15	0.22	0.23	0.55	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.193306	NA	NA	NA	NA	NA	0.362	NA	3.8579
1266	9	5762533	5762533	A	C	intronic	KIAA1432	NA	NA	NA	intronic	ENSG00000107036	NA	NA	NA	NA	NA	9p24.1	NA	NA	Name=4	NA	rs1543526	0.4	0.4	0.386	0.397764	0.3608	0.5774	0.3602	0.2352	0.4969	0.37	0.61	0.38	0.23	0.4043	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.356635	NA	NA	0.377093	0.234453	NA	0.449	NA	3.857807
1266	19	36259494	36259494	C	A	UTR3	C19orf55	NM_001039887:c.*47C>A	NA	NA	UTR3	ENSG00000167595	ENST00000396908:c.*47C>A,ENST00000544099:c.*213C>A,ENST00000535581:c.*1328C>A	NA	NA	NA	NA	19q13.12	NA	NA	NA	NA	rs231216	0.45	0.45	0.329	0.228235	0.1252	0.2808	0.2608	0.3374	0.1094	0.27	0.56	0.47	0.61	0.3504	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.279382	NA	NA	NA	NA	NA	0.145	NA	3.8577334
1266	4	20611629	20611629	G	A	intronic	SLIT2	NA	NA	NA	intronic	ENSG00000145147	NA	NA	NA	NA	NA	4p15.31	NA	NA	NA	NA	rs3733510	0.07	0.07	0.059	0.0726837	0.0408	0.124	0.1398	0.0378	0.0521	0.04	0.13	0.11	0.03	0.059	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.197755	NA	NA	0.042674	0.028597	NA	0.007	NA	3.857526
1266	17	4416635	4416635	C	A	intronic	SPNS2	NA	NA	NA	intronic	ENSG00000183018	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs77483673	0.02	0.02	0.02	0.0175719	0.0586	NA	0.0231	0.0023	0.0102	0.05	NA	0.03	0.002	0.0344	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.855162	NA	NA	0.049693	0.010842	NA	0.007	NA	3.857307
1266	1	55631650	55631650	G	T	intronic	USP24	NA	NA	NA	intronic	ENSG00000162402	NA	NA	NA	NA	NA	1p32.3	NA	NA	NA	NA	rs17111697	0.11	0.11	0.113	0.124201	0.0328	0.0377	0.0403	0.3555	0.0542	0.04	0.05	0.05	0.34	0.0706	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.654689	NA	NA	0.039315	0.278339	NA	0.08	NA	3.857285
1266	7	30825229	30825229	C	G	ncRNA_intronic	INMT-FAM188B	NA	NA	NA	intronic	ENSG00000106125,ENSG00000254959	NA	NA	NA	NA	NA	7p14.3	NA	NA	NA	NA	rs2269921	0.41	0.41	0.392	0.442093	0.4761	0.1696	0.4193	0.584	0.5123	0.48	0.18	0.43	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.061603	NA	NA	NA	NA	NA	0.377	NA	3.8572333
1266	2	206605180	206605180	T	G	intronic	NRP2	NA	NA	NA	intronic	ENSG00000118257	NA	NA	NA	NA	NA	2q33.3	NA	NA	NA	NA	rs849575	0.24	0.24	0.247	0.249401	0.1431	0.4544	0.1499	0.1944	0.2924	0.15	0.46	0.16	0.2	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.493327	NA	NA	NA	NA	NA	0.203	NA	3.8569
1266	4	6062061	6062061	T	C	intronic	JAKMIP1	NA	NA	NA	intronic	ENSG00000152969	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs28553970	0.23	0.23	0.256	0.285144	0.1431	0.001	0.1499	0.7413	0.2035	0.15	NA	0.13	0.7	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.59248	NA	NA	NA	NA	NA	0.304	NA	3.8569
1266	4	79793707	79793707	C	A	intronic	BMP2K	NA	NA	NA	intronic	ENSG00000138756	NA	NA	NA	NA	NA	4q21.21	NA	NA	NA	NA	rs1061400	0.1	0.1	0.099	0.129393	0.1431	0.0893	0.1556	0.0272	0.2761	0.15	0.08	0.15	0.03	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.948905	NA	NA	NA	NA	NA	0.13	NA	3.8569
1266	9	34098257	34098257	G	C	intronic	DCAF12	NA	NA	NA	intronic	ENSG00000198876	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs17341977	0.11	0.11	0.091	0.132987	0.1431	0.0675	0.1326	0.0469	0.3067	0.15	0.09	0.15	0.03	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.928469	NA	NA	NA	NA	NA	0.116	NA	3.8569
1266	11	47736023	47736023	T	C	intronic	AGBL2	NA	NA	NA	intronic	ENSG00000165923	NA	NA	NA	NA	NA	11p11.2	NA	NA	NA	NA	rs4752791	0.23	0.23	0.206	0.219249	0.1431	0.2946	0.1988	0.2995	0.1258	0.15	0.32	0.2	0.25	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.628704	NA	NA	NA	NA	NA	0.167	NA	3.8569
1266	12	6103844	6103844	G	A	intronic	VWF	NA	NA	NA	intronic	ENSG00000110799	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs17491334	0.09	0.09	0.092	0.0876597	0.1431	0.001	0.1037	0.121	0.0634	0.14	NA	0.1	0.08	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.060418	NA	NA	NA	NA	NA	0.145	NA	3.8569
1266	12	48528419	48528419	T	C	intronic	PFKM	NA	NA	NA	intronic	ENSG00000152556	NA	NA	NA	NA	NA	12q13.11	NA	NA	NA	NA	rs2286020	0.19	0.19	0.201	0.189097	0.1431	0.1409	0.1138	0.3381	0.138	0.15	0.17	0.1	0.34	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.313483	NA	NA	NA	NA	NA	0.246	NA	3.8569
1266	15	65114363	65114363	G	A	intronic	PIF1	NA	NA	NA	intronic	ENSG00000140451	NA	NA	NA	NA	NA	15q22.31	NA	NA	NA	NA	rs55736601	0.07	0.07	0.051	0.0407348	0.1431	NA	0.0591	0.0053	0.0123	0.15	NA	0.07	0.01	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.015317	NA	NA	NA	NA	NA	0.101	NA	3.8569
1266	16	58292547	58292547	G	A	intronic	CCDC113	NA	NA	NA	intronic	ENSG00000103021	NA	NA	NA	NA	NA	16q21	NA	NA	NA	NA	rs16959998	0.19	0.19	0.175	0.204273	0.1431	0.3383	0.2824	0.0265	0.3139	0.14	0.37	0.24	0.01	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.285578	NA	NA	NA	NA	NA	0.159	NA	3.8569
1266	16	74660185	74660185	C	T	intronic	RFWD3	NA	NA	NA	intronic	ENSG00000168411	NA	NA	NA	NA	NA	16q23.1	NA	NA	NA	NA	rs78219119	0.11	0.11	0.087	0.113818	0.1431	0.0437	0.2896	0.0514	0.1155	0.15	0.05	0.25	0.04	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.167218	NA	NA	NA	NA	NA	0.109	NA	3.8569
1266	16	74702430	74702430	C	T	intergenic	RFWD3,MLKL	dist=1651;dist=3323	NA	NA	ncRNA_exonic	ENSG00000262904	NA	NA	NA	NA	NA	16q23.1	NA	NA	NA	NA	rs4395097	0.11	0.11	0.08	0.116613	0.1431	0.005	0.2925	0.0908	0.1145	0.15	0.0017	0.25	0.07	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.461612	NA	NA	NA	NA	NA	0.13	NA	3.8569
1266	19	43430463	43430463	G	A	intronic	PSG7	NA	NA	NA	intronic	ENSG00000221878	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs112724259	0.11	0.11	0.096	0.107428	0.1431	0.003	0.2161	0.0893	0.1258	0.15	0.0017	0.21	0.12	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.971562	NA	NA	NA	NA	NA	0.159	NA	3.8569
1266	19	43430945	43430945	G	A	intronic	PSG7	NA	NA	NA	intronic	ENSG00000221878	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs59007873	0.11	0.11	0.099	0.107628	0.1431	0.003	0.2176	0.0885	0.1268	0.15	0.0017	0.21	0.12	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.94061	NA	NA	NA	NA	NA	0.167	NA	3.8569
1266	19	43433521	43433521	C	T	intronic	PSG7	NA	NA	NA	intronic	ENSG00000221878	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs111661802	0.11	0.11	0.093	0.107228	0.1431	0.003	0.2176	0.0885	0.1247	0.15	0.0017	0.21	0.11	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.644331	NA	NA	NA	NA	NA	0.167	NA	3.8569
1266	19	43439490	43439490	T	C	intronic	PSG7	NA	NA	NA	intronic	ENSG00000221878	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs61433961	0.13	0.13	0.103	0.13778	0.1431	0.0109	0.2277	0.1921	0.1258	0.15	0.01	0.2	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.394737	NA	NA	NA	NA	NA	0.138	NA	3.8569
1266	2	202436645	202436645	C	T	intronic	ALS2CR11	NA	NA	NA	intronic	ENSG00000155754	NA	NA	NA	NA	NA	2q33.1	NA	NA	NA	NA	rs58588240	0.04	0.04	0.038	0.04373	0.0477	NA	0.0476	0.0991	0.0072	0.05	NA	0.04	0.07	0.0418	0.078	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.025665	NA	NA	0.053721	0.077621	NA	0.036	NA	3.856779
1266	16	20838553	20838553	A	G	intronic	LOC81691	NA	NA	NA	intronic	ENSG00000005189,ENSG00000196678	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs112541646	0.03	0.03	0.024	0.0197684	0.0577	NA	0.0331	0.003	0.0143	0.06	NA	0.03	0.002	0.0365	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.488855	NA	NA	0.049302	0.010223	NA	0.029	NA	3.856498
1266	9	136260696	136260696	G	C	intronic	C9orf96	NA	NA	NA	intronic	ENSG00000198870	NA	NA	NA	NA	NA	9q34.2	NA	Name=Pol2(phosphoS2)	NA	NA	rs41306714	0.28	0.28	0.242	0.280152	0.3976	0.25	0.3617	0.0393	0.4581	0.41	0.24	0.35	0.07	0.3672	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.190828	NA	NA	0.379042	0.088743	NA	0.225	NA	3.856158
1266	6	30228379	30228379	A	G	ncRNA_exonic	HLA-L	NA	NA	NA	ncRNA_exonic	ENSG00000243753	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs2516709	0.32	0.32	0.229	0.397364	0.2455	0.5308	0.4496	0.3003	0.5102	0.21	0.47	0.38	0.28	0.3176	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.432586	NA	NA	0.247415	0.279801	NA	0.348	NA	3.8561516
1266	1	16272409	16272409	C	T	intronic	ZBTB17	NA	NA	NA	intronic	ENSG00000116809	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs9429277	0.06	0.06	0.045	0.0782748	0.0726	0.0813	0.0548	0.0197	0.1769	0.08	0.06	0.05	0.03	0.0714	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.636046	NA	NA	NA	NA	NA	0.043	NA	3.856
1266	6	151243234	151243234	C	T	intronic	MTHFD1L	NA	NA	NA	intronic	ENSG00000120254	NA	NA	NA	NA	NA	6q25.1	NA	NA	NA	NA	rs2295084	0.18	0.18	0.163	0.203674	0.1441	0.2411	0.2161	0.2012	0.2209	0.14	0.2	0.22	0.19	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.293652	NA	NA	NA	NA	NA	0.21	NA	3.8559
1266	7	111034910	111034910	G	A	intronic	IMMP2L	NA	NA	NA	intronic	ENSG00000184903	NA	NA	NA	NA	NA	7q31.1	NA	NA	NA	NA	rs37676	0.19	0.19	0.213	0.20647	0.1441	0.0337	0.1167	0.5151	0.0951	0.15	0.03	0.12	0.5	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.262406	NA	NA	NA	NA	NA	0.312	NA	3.8559
1266	9	33933705	33933705	A	G	intronic	UBAP2	NA	NA	NA	intronic	ENSG00000137073	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs874572	0.11	0.11	0.093	0.134385	0.1441	0.0675	0.134	0.0477	0.3108	0.16	0.09	0.15	0.04	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.10219	NA	NA	NA	NA	NA	0.109	NA	3.8559
1266	10	28345336	28345336	C	T	intronic	MPP7	NA	NA	NA	intronic	ENSG00000150054	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs61845094	0.08	0.08	0.074	0.067492	0.1441	0.0079	0.0692	0.0666	0.0501	0.14	0.01	0.08	0.06	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.674747	NA	NA	NA	NA	NA	0.159	NA	3.8559
1266	12	113756706	113756706	C	G	intronic	SLC24A6	NA	NA	NA	intronic	ENSG00000089060	NA	NA	NA	NA	NA	12q24.13	NA	NA	NA	NA	rs2288364	0.23	0.23	0.244	0.241414	0.1441	0.1984	0.1196	0.4546	0.184	0.15	0.22	0.12	0.45	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.163995	NA	NA	NA	NA	NA	0.304	NA	3.8559
1266	17	79084574	79084574	C	T	intronic	BAIAP2	NA	NA	NA	intronic	ENSG00000175866	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs56084168	0.18	0.18	0.149	0.164936	0.1441	0.1399	0.3559	0.0983	0.1667	0.15	0.16	0.31	0.16	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.121362	NA	NA	NA	NA	NA	0.174	NA	3.8559
1266	19	17306031	17306031	T	C	exonic	MYO9B	NA	synonymous SNV	MYO9B:NM_001130065:exon22:c.T3795C:p.P1265P,MYO9B:NM_004145:exon22:c.T3795C:p.P1265P	exonic	ENSG00000099331	NA	synonymous SNV	ENSG00000099331:ENST00000397274:exon21:c.T3795C:p.P1265P,ENSG00000099331:ENST00000595641:exon21:c.T3795C:p.P1265P,ENSG00000099331:ENST00000594824:exon22:c.T3795C:p.P1265P,ENSG00000099331:ENST00000595618:exon22:c.T3795C:p.P1265P	NA	NA	19p13.11	NA	NA	NA	NA	rs2279003	0.75	0.75	0.71	0.759185	0.5676	0.745	0.8012	0.9705	0.6554	0.57	0.78	0.78	0.97	0.6576	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.032793	NA	NA	0.58562	0.917871	NA	0.674	NA	3.8558466
1266	6	30229457	30229457	C	T	ncRNA_exonic	HLA-L	NA	NA	NA	ncRNA_exonic	ENSG00000243753	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs2023478	0.34	0.34	0.29	0.397564	0.2465	0.5308	0.4496	0.3003	0.5102	0.22	0.48	0.4	0.3	0.3166	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.452643	NA	NA	0.247877	0.280132	NA	0.384	NA	3.8556896
1266	14	106791131	106791131	A	G	intergenic	LINC00226,LINC00221	dist=46165;dist=147324	NA	NA	exonic	ENSG00000211953	NA	synonymous SNV	ENSG00000211953:ENST00000390613:exon2:c.T225C:p.S75S	NA	NA	14q32.33	NA	NA	NA	NA	rs10148460	0.29	0.29	0.243	NA	NA	NA	NA	NA	NA	0.27	0.2	0.32	0.4	0.3276	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.640723	NA	NA	0.317189	0.387835	NA	0.029	NA	3.855211
1267	2	48956417	48956417	C	T	intronic	LHCGR,STON1-GTF2A1L	NA	NA	NA	intronic	ENSG00000068781,ENSG00000138039,ENSG00000242441	NA	NA	NA	NA	NA	2p16.3	NA	NA	NA	NA	rs6759468	0.02	0.02	0.023	0.0179712	0.0517	0.001	0.0303	0.0061	0.0082	0.04	0.01	0.04	0.01	0.0364	0.057	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.119974	NA	NA	0.056977	0.015887	NA	0.022	NA	3.854923
1267	2	231157271	231157271	T	C	intronic	SP140	NA	NA	NA	intronic	ENSG00000079263	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs7602027	0.19	0.19	0.194	0.18151	0.1451	0.2698	0.1628	0.2035	0.1115	0.15	0.31	0.15	0.16	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.481531	NA	NA	NA	NA	NA	0.174	NA	3.8549
1267	3	111289988	111289988	C	T	intronic	CD96	NA	NA	NA	intronic	ENSG00000153283	NA	NA	NA	NA	NA	3q13.13	NA	NA	NA	NA	rs2399393	0.16	0.16	0.16	0.155152	0.1451	0.3185	0.1744	0.003	0.1892	0.14	0.33	0.18	0.01	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.038365	NA	NA	NA	NA	NA	0.087	NA	3.8549
1267	11	65049278	65049278	A	G	intronic	POLA2	NA	NA	NA	intronic	ENSG00000014138	NA	NA	NA	NA	NA	11q13.1	NA	NA	NA	NA	rs611910	0.13	0.13	0.104	0.152955	0.1451	0.0694	0.134	0.1853	0.2168	0.14	0.08	0.15	0.15	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.041667	NA	NA	NA	NA	NA	0.167	NA	3.8549
1267	12	9356603	9356603	T	C	intronic	PZP	NA	NA	NA	intronic	ENSG00000126838	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs78952243	0.12	0.12	0.124	0.122005	0.1451	0.0972	0.0778	0.0787	0.2137	0.15	0.12	0.09	0.1	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.483389	NA	NA	NA	NA	NA	0.109	NA	3.8549
1267	19	41387397	41387397	A	G	intronic	CYP2A7	NA	NA	NA	intronic	ENSG00000198077,ENSG00000268797	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs67808403	0.15	0.15	0.141	0.127196	0.1451	0.1954	0.0793	0.1188	0.0838	0.15	0.2	0.09	0.14	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.05015	NA	NA	NA	NA	ID=COSN165821;OCCURENCE=1(breast)	0.152	NA	3.8549
1267	6	101037678	101037678	T	C	intronic	ASCC3	NA	NA	NA	intronic	ENSG00000112249	NA	NA	NA	NA	NA	6q16.3	NA	NA	NA	NA	rs240166	0.06	0.06	0.068	0.0686901	0.0497	NA	0.049	0.1838	0.0174	0.05	NA	0.05	0.14	0.0503	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.832854	NA	NA	0.045243	0.140717	NA	0.101	NA	3.854757
1267	11	372784	372784	G	A	intronic	B4GALNT4	NA	NA	NA	intronic	ENSG00000182272	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs55794317	0.02	0.02	NA	0.01877	0.0358	NA	0.0274	0.0008	0.0389	0.04	NA	0.03	0.002	0.0643	0.045	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.487392	1.487392	NA	0.045194	0.006843	NA	0.116	NA	3.854706
1267	11	85975337	85975337	A	T	intronic	EED	NA	NA	NA	intronic	ENSG00000074266	NA	NA	NA	NA	NA	11q14.2	NA	NA	NA	NA	rs78475799	0.03	0.03	0.03	0.0357428	0.0626	NA	0.0562	0.0257	0.044	0.05	NA	0.06	0.02	0.0387	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.986343	NA	NA	0.04408	0.021571	NA	0.022	NA	3.85462
1267	1	200080464	200080464	C	A	intronic	NR5A2	NA	NA	NA	intronic	ENSG00000116833	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs202167972	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.1455	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.476129	NA	NA	NA	NA	NA	NA	NA	3.8545
1267	8	86386697	86386697	C	T	intronic	CA2	NA	NA	NA	intronic	ENSG00000104267	NA	NA	NA	NA	NA	8q21.2	NA	NA	NA	NA	rs112597132	0.03	0.03	0.016	0.0189696	0.0596	NA	0.0317	0.0038	0.0082	0.05	NA	0.04	0.01	0.037	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.374618	NA	NA	0.048939	0.009797	NA	0.014	NA	3.854461
1267	2	48589683	48589683	G	A	intronic	FOXN2	NA	NA	NA	intronic	ENSG00000170802	NA	NA	NA	NA	NA	2p16.3	NA	NA	NA	NA	rs34242257	0.07	0.07	0.064	0.0583067	0.1461	0.003	0.0951	0.0091	0.0654	0.14	0.0017	0.1	0.01	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.287816	NA	NA	NA	NA	NA	0.203	NA	3.8539
1267	4	7639974	7639974	G	C	intronic	SORCS2	NA	NA	NA	intronic	ENSG00000184985	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs73202520	0.08	0.08	0.079	0.0511182	0.1461	0.001	0.0807	0.0061	0.045	0.16	NA	0.1	0.01	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.384912	NA	NA	NA	NA	NA	0.101	NA	3.8539
1267	4	55154891	55154891	T	C	intronic	PDGFRA	NA	NA	NA	intronic	ENSG00000134853,ENSG00000145216	NA	NA	NA	NA	NA	4q12	NA	NA	NA	NA	rs55732997	0.21	0.21	0.199	0.242412	0.1461	0.1726	0.2781	0.3472	0.2464	0.15	0.17	0.23	0.32	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.111939	NA	NA	NA	NA	NA	0.275	NA	3.8539
1267	5	32072213	32072213	A	C	intronic	PDZD2	NA	NA	NA	intronic	ENSG00000133401	NA	NA	NA	NA	NA	5p13.3	NA	NA	NA	NA	rs3797064	0.18	0.18	0.17	0.181909	0.1461	0.2312	0.1614	0.2073	0.1483	0.15	0.25	0.13	0.17	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.898896	NA	NA	NA	NA	NA	0.239	NA	3.8539
1267	6	117663499	117663499	A	G	intronic	ROS1	NA	NA	NA	intronic	ENSG00000047936	NA	NA	NA	NA	NA	6q22.1	NA	NA	NA	NA	rs2243385	0.11	0.11	0.099	0.0998403	0.1461	0.1032	0.1095	0.0507	0.1084	0.15	0.11	0.1	0.06	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.76149	NA	NA	NA	NA	NA	0.145	NA	3.8539
1267	17	73625430	73625430	G	A	exonic	RECQL5	NA	synonymous SNV	RECQL5:NM_004259:exon16:c.C2073T:p.H691H	exonic	ENSG00000108469	NA	synonymous SNV	ENSG00000108469:ENST00000582548:exon1:c.C93T:p.H31H,ENSG00000108469:ENST00000580707:exon9:c.C540T:p.H180H,ENSG00000108469:ENST00000317905:exon16:c.C2073T:p.H691H,ENSG00000108469:ENST00000423245:exon16:c.C1992T:p.H664H	NA	NA	17q25.1	NA	NA	NA	NA	rs4788902	0.56	0.56	0.55	0.525958	0.6024	0.8085	0.647	0.1437	0.5869	0.6	0.81	0.61	0.15	0.6127	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.05126	NA	NA	0.59788	0.204783	NA	0.522	NA	3.8536866
1267	10	13320236	13320236	C	T	UTR3	PHYH	NM_006214:c.*65G>A,NM_001037537:c.*65G>A	NA	NA	UTR3	ENSG00000107537	ENST00000396913:c.*65G>A,ENST00000263038:c.*65G>A,ENST00000396920:c.*65G>A	NA	NA	NA	NA	10p13	NA	NA	NA	NA	rs11133	0.24	0.24	0.247	0.236422	0.2296	0.2024	0.1499	0.3563	0.1779	0.23	0.22	0.17	0.34	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.830388	NA	NA	0.250157	0.36922	NA	0.196	NA	3.8535764
1267	19	15882777	15882777	A	C	ncRNA_intronic	CYP4F24P	NA	NA	NA	ncRNA_intronic	ENSG00000267594	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs3752146	0.85	0.85	0.809	0.852835	0.8131	0.9425	0.8559	0.82	0.8436	0.81	0.92	0.83	0.84	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.043386	NA	NA	NA	NA	NA	0.783	NA	3.8535666
1267	13	103474382	103474382	G	A	intronic	BIVM,BIVM-ERCC5	NA	NA	NA	intronic	ENSG00000134897,ENSG00000270181	NA	NA	NA	NA	NA	13q33.1	NA	NA	NA	NA	rs2274390	0.06	0.06	0.043	0.0441294	0.0567	0.0635	0.0231	0.0265	0.0501	0.06	0.07	0.03	0.04	0.0466	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.164539	NA	NA	0.043256	0.036087	NA	0.029	NA	3.853444
1267	14	51289874	51289874	G	T	intronic	NIN	NA	NA	NA	ncRNA_intronic	ENSG00000258843	NA	NA	NA	NA	NA	14q22.1	NA	Name=EBF,YY1,YY1_(C-20)	NA	NA	rs1547077	NA	NA	NA	0.828474	0.8569	0.8353	0.8098	0.8442	0.7843	NA	NA	NA	NA	0.6233	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.132734	NA	NA	NA	NA	NA	0.913	NA	3.8531333
1267	2	232262419	232262419	G	A	intronic	B3GNT7	NA	NA	NA	intronic	ENSG00000156966	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs10445829	0.03	0.03	0.02	0.0207668	0.0586	NA	0.0418	0.003	0.0123	0.06	0.0017	0.04	NA	0.0393	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.581241	NA	NA	0.049163	0.011565	NA	0.058	NA	3.852937
1267	1	32890941	32890941	G	T	intergenic	BSDC1,ZBTB8B	dist=30879;dist=39717	NA	NA	ncRNA_intronic	ENSG00000229259	NA	NA	NA	NA	NA	1p35.1	NA	NA	NA	NA	rs6682924	0.09	0.09	0.095	0.0814696	0.1471	NA	0.0807	0.1188	0.0481	0.14	NA	0.09	0.14	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.707151	NA	NA	NA	NA	NA	0.13	NA	3.8529
1267	7	38259354	38259354	T	G	intronic	STARD3NL	NA	NA	NA	intronic	ENSG00000010270	NA	NA	NA	NA	NA	7p14.1	NA	NA	NA	NA	rs2392540	0.15	0.15	0.117	0.150559	0.1471	0.2192	0.1916	0.0772	0.1534	0.15	0.2	0.17	0.07	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.867524	NA	NA	NA	NA	NA	0.181	NA	3.8529
1267	8	144463643	144463643	C	T	intronic	RHPN1	NA	NA	NA	intronic	ENSG00000158106	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs7015558	0.14	0.14	0.117	0.114018	0.1471	0.2252	0.1066	0.0408	0.0695	0.15	0.22	0.11	0.04	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.557177	NA	NA	NA	NA	NA	0.08	NA	3.8529
1267	11	4854147	4854147	C	T	intergenic	OR51F2,OR51S1	dist=10503;dist=15320	NA	NA	ncRNA_exonic	ENSG00000197984	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs17250199	0.08	0.08	0.067	0.0519169	0.1471	NA	0.0951	0.0234	0.0153	0.15	NA	0.13	0.02	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.21061	NA	NA	NA	NA	NA	0.109	NA	3.8529
1267	11	33080407	33080407	G	C	intronic	TCP11L1	NA	NA	NA	intronic	ENSG00000176148	NA	NA	NA	NA	NA	11p13	NA	NA	NA	NA	rs112498700	0.17	0.17	0.166	0.195687	0.1471	0.3393	0.0908	0.1044	0.2955	0.16	0.3	0.1	0.1	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.852371	NA	NA	NA	NA	NA	0.145	NA	3.8529
1267	13	28141698	28141698	A	G	intronic	LNX2	NA	NA	NA	intronic	ENSG00000139517	NA	NA	NA	NA	NA	13q12.2	NA	NA	NA	NA	rs35007323	0.07	0.07	0.057	0.0609026	0.1471	0.003	0.0677	0.0061	0.1012	0.15	0.0017	0.08	0.01	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.674384	NA	NA	NA	NA	NA	0.029	NA	3.8529
1267	14	36190841	36190841	G	A	intronic	RALGAPA1	NA	NA	NA	intronic	ENSG00000174373	NA	NA	NA	NA	NA	14q13.2	NA	NA	NA	NA	rs2296169	0.16	0.16	0.15	0.176917	0.1471	0.1329	0.1167	0.2859	0.1483	0.14	0.11	0.15	0.27	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.406466	NA	NA	NA	NA	NA	0.152	NA	3.8529
1267	15	48795877	48795877	G	A	intronic	FBN1	NA	NA	NA	intronic	ENSG00000166147	NA	NA	NA	NA	NA	15q21.1	NA	NA	NA	NA	rs16961033	0.27	0.27	0.276	0.272165	0.1471	0.3522	0.1931	0.438	0.1503	0.14	0.38	0.16	0.42	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.536607	NA	NA	NA	NA	NA	0.232	NA	3.8529
1267	15	72904176	72904176	C	T	intergenic	MIR630,GOLGA6B	dist=24522;dist=42862	NA	NA	ncRNA_exonic	ENSG00000243790	NA	NA	NA	NA	NA	15q24.1	NA	NA	NA	NA	rs6495012	0.34	0.34	0.336	0.353634	0.1471	0.4831	0.3314	0.5514	0.181	0.14	0.46	0.3	0.55	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.828193	NA	NA	NA	NA	NA	0.348	NA	3.8529
1267	19	33106742	33106742	A	G	intronic	ANKRD27	NA	NA	NA	intronic	ENSG00000105186	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs395136	0.4	0.4	0.434	0.426717	0.1471	0.4841	0.2046	0.8124	0.2914	0.13	0.53	0.22	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.74424	NA	NA	NA	NA	NA	0.435	NA	3.8529
1267	19	33106761	33106761	A	G	intronic	ANKRD27	NA	NA	NA	intronic	ENSG00000105186	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs414496	0.4	0.4	0.433	0.423922	0.1471	0.4841	0.2046	0.7995	0.2945	0.13	0.53	0.22	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.253495	NA	NA	NA	NA	NA	0.435	NA	3.8529
1267	10	69902919	69902919	T	C	intronic	MYPN	NA	NA	NA	intronic	ENSG00000138347	NA	NA	NA	NA	NA	10q21.3	NA	NA	NA	NA	rs28429181	0.11	0.11	0.121	0.114217	0.0408	NA	0.0533	0.3722	0.002	0.04	NA	0.07	0.39	0.0586	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.261306	NA	NA	0.047708	0.320355	NA	0.109	NA	3.852892
1267	1	38082381	38082381	G	C	intronic	RSPO1	NA	NA	NA	intronic	ENSG00000169218	NA	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	rs45577433	0.02	0.02	0.016	0.0205671	0.0408	0.0129	0.0173	0.0023	0.0348	0.04	0.01	0.02	0.0041	0.0457	0.061	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.477281	NA	NA	0.06077	0.012418	NA	0.014	NA	3.85273
1267	16	31422429	31422429	T	C	exonic	ITGAD	NA	synonymous SNV	ITGAD:NM_005353:exon13:c.T1389C:p.S463S	exonic	ENSG00000156886	NA	synonymous SNV	ENSG00000156886:ENST00000389202:exon13:c.T1389C:p.S463S	NA	NA	16p11.2	Score=883;Name=V$GR_Q6	NA	NA	NA	rs12444660	0.91	0.91	0.914	0.913938	0.9394	0.8244	0.9568	0.9077	0.9581	0.94	0.83	0.96	0.93	0.9317	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.329689	NA	NA	0.94314	0.925125	NA	0.942	NA	3.8524266
1267	5	289642	289642	G	A	intronic	PDCD6	NA	NA	NA	ncRNA_exonic	ENSG00000250848	NA	NA	NA	NA	NA	5p15.33	NA	NA	NA	NA	rs6555127	0.31	0.31	0.251	0.312899	0.4811	0.2202	0.3242	0.0855	0.5348	0.49	0.24	0.31	0.1	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.253442	NA	NA	NA	NA	NA	0.268	NA	3.8522333
1267	10	102048269	102048269	G	A	intronic	PKD2L1	NA	NA	NA	intronic	ENSG00000107593	NA	NA	NA	NA	NA	10q24.31	NA	NA	NA	NA	rs2305386	0.07	0.07	0.06	0.0788738	0.0487	0.0605	0.0519	0.1195	0.093	0.05	0.07	0.06	0.1	0.0527	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.279621	NA	NA	0.046512	0.093509	NA	0.051	NA	3.852088
1267	1	33741615	33741615	T	A	intronic	ZNF362	NA	NA	NA	intronic	ENSG00000160094	NA	NA	NA	NA	NA	1p35.1	NA	NA	NA	NA	rs7514338	0.18	0.18	0.19	0.228235	0.1481	0.0843	0.1455	0.4092	0.273	0.15	0.08	0.17	0.38	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.601495	NA	NA	NA	NA	NA	0.174	NA	3.8519
1267	6	24475278	24475278	G	A	intronic	GPLD1	NA	NA	NA	intronic	ENSG00000112293	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs77374467	0.1	0.1	0.089	0.0988419	0.1481	0.0992	0.0922	0.0189	0.1605	0.15	0.09	0.09	0.02	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.329838	NA	NA	NA	NA	NA	0.08	NA	3.8519
1267	8	98973560	98973560	C	T	intronic	MATN2	NA	NA	NA	intronic	ENSG00000132561	NA	NA	NA	NA	NA	8q22.1	NA	NA	NA	NA	rs62523561	0.24	0.24	0.231	0.278954	0.1481	0.369	0.134	0.3048	0.3885	0.13	0.36	0.12	0.33	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.221498	NA	NA	NA	NA	NA	0.254	NA	3.8519
1267	9	97216163	97216163	G	T	intronic	HIATL1	NA	NA	NA	intronic	ENSG00000148110	NA	NA	NA	NA	NA	9q22.32	NA	NA	NA	NA	rs7037298	0.16	0.16	0.155	0.172923	0.1481	0.0506	0.134	0.2625	0.2311	0.14	0.07	0.16	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.425809	NA	NA	NA	NA	NA	0.123	NA	3.8519
1267	16	4812816	4812816	G	A	intronic	ZNF500	NA	NA	NA	intronic	ENSG00000103199	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs2290561	0.14	0.14	0.113	0.144169	0.1481	0.2609	0.1556	0.0053	0.1994	0.14	0.24	0.16	0.0041	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.137166	NA	NA	NA	NA	ID=COSN165098;OCCURENCE=1(breast)	0.159	NA	3.8519
1267	21	43259709	43259709	C	T	intronic	PRDM15	NA	NA	NA	intronic	ENSG00000141956	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs4920145	0.03	0.03	0.024	0.0413339	0.0388	0.005	0.036	0.034	0.0951	0.04	0.0035	0.04	0.04	0.0519	0.065	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.973175	NA	NA	0.057442	0.045393	NA	0.051	NA	3.851858
1267	19	46357811	46357811	C	A	intronic	SYMPK	NA	NA	NA	UTR5	ENSG00000125755	ENST00000600237:c.-58G>T,ENST00000598059:c.-58G>T	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs2287718	0.14	0.14	0.134	0.144369	0.1571	0.0923	0.2334	0.1074	0.1718	0.16	0.09	0.2	0.12	0.1578	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.112665	NA	NA	NA	NA	NA	0.072	NA	3.8517667
1267	11	620289	620289	C	T	intronic	CDHR5	NA	NA	NA	intronic	ENSG00000099834	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs117875177	0.02	0.02	0.016	0.0305511	0.0477	NA	0.0375	0.0008	0.0798	0.04	NA	0.05	0.002	0.0471	0.053	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.621846	NA	NA	0.053488	0.008398	NA	0.065	NA	3.851712
1267	12	71531889	71531889	T	C	intronic	TSPAN8	NA	NA	NA	intronic	ENSG00000127324	NA	NA	NA	NA	NA	12q21.1	NA	Name=CTCF,Rad21	NA	NA	rs1798093	0.35	0.35	0.339	0.333466	0.4016	0.1607	0.3372	0.4675	0.2577	0.41	0.15	0.37	0.47	0.3573	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.681763	1.681763	NA	0.389419	0.446891	NA	0.406	NA	3.851681
1267	17	62754586	62754586	T	C	ncRNA_intronic	LOC146880	NA	NA	NA	ncRNA_intronic	ENSG00000215769,ENSG00000266820	NA	NA	NA	NA	NA	17q24.1	NA	NA	NA	NA	rs9908143	0.82	0.82	0.84	0.852835	0.8151	0.8423	0.6628	0.9342	0.9274	0.8	0.83	0.68	0.94	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.591827	NA	NA	NA	NA	NA	0.877	NA	3.8515666
1267	5	137754695	137754695	T	C	exonic	KDM3B	NA	synonymous SNV	KDM3B:NM_016604:exon14:c.T3489C:p.G1163G	exonic	ENSG00000120733	NA	synonymous SNV	ENSG00000120733:ENST00000542866:exon7:c.T585C:p.G195G,ENSG00000120733:ENST00000394866:exon9:c.T2457C:p.G819G,ENSG00000120733:ENST00000314358:exon14:c.T3489C:p.G1163G	NA	NA	5q31.2	NA	NA	NA	NA	rs7726234	0.66	0.66	0.638	0.678115	0.5924	0.8532	0.6715	0.5681	0.7393	0.59	0.87	0.62	0.55	0.6389	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.105402	NA	NA	0.583837	0.584203	ID=COSM448654;OCCURENCE=1(breast)	0.623	NA	3.8515296
1267	4	57182901	57182901	A	G	intronic	KIAA1211	NA	NA	NA	intronic	ENSG00000109265	NA	NA	NA	NA	NA	4q12	NA	NA	NA	NA	rs73159954	0.08	0.08	0.073	0.0854633	0.0398	0.1895	0.0389	0.0204	0.1462	0.05	0.21	0.05	0.03	0.0677	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.07349	NA	NA	0.041076	0.018384	NA	0.072	NA	3.851424
1267	8	72625328	72625328	T	A	intergenic	EYA1,MSC	dist=350861;dist=128449	NA	NA	intergenic	ENSG00000254277,ENSG00000253287	dist=10307;dist=66512	NA	NA	NA	NA	8q13.3	NA	Name=ZNF263	NA	NA	rs56225142	0.45	0.45	0.398	0.425919	0.4821	0.5704	0.5764	0.1762	0.4499	0.49	0.56	0.58	0.18	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.307031	1.307031	NA	NA	NA	NA	0.428	NA	3.8512334
1267	8	7155013	7155013	T	C	intergenic	LOC349196,FAM66B	dist=11133;dist=4120	NA	NA	ncRNA_exonic	ENSG00000233295	NA	NA	NA	NA	NA	8p23.1	NA	NA	NA	NA	rs34002377	0.13	0.13	0.055	0.144569	0.0586	0.0595	0.0735	0.3593	0.0808	0.04	0.04	0.08	0.41	0.0595	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.31091	NA	0.53	0.030679	0.188063	NA	NA	NA	3.851221
1267	19	22235526	22235526	T	C	intronic	ZNF257	NA	NA	NA	intronic	ENSG00000197134	NA	NA	NA	NA	NA	19p12	NA	Name=YY1	NA	NA	rs387315	0.56	0.56	0.528	0.498403	0.5746	0.5456	0.6311	0.4599	0.3292	0.59	0.58	0.58	0.48	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.026613	NA	NA	0.574481	0.479046	NA	0.514	NA	3.850919
1267	2	136590558	136590558	C	T	intronic	LCT	NA	NA	NA	intronic	ENSG00000115850	NA	NA	NA	NA	NA	2q21.3	NA	NA	NA	NA	rs3754690	0.2	0.2	0.207	0.236222	0.1491	0.1944	0.3127	0.2186	0.3384	0.14	0.2	0.26	0.23	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.161854	NA	NA	NA	NA	NA	0.181	NA	3.8509
1267	7	5941411	5941411	G	A	intronic	CCZ1	NA	NA	NA	intronic	ENSG00000122674	NA	NA	NA	NA	NA	7p22.1	NA	NA	NA	NA	rs112286506	0.1	0.1	0.074	0.100439	0.1491	0.0407	0.1614	0.0469	0.1411	0.13	0.03	0.19	0.07	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.733369	NA	NA	NA	NA	NA	0.13	NA	3.8509
1267	16	58292214	58292214	A	G	intronic	CCDC113	NA	NA	NA	intronic	ENSG00000103021	NA	NA	NA	NA	NA	16q21	NA	NA	NA	NA	rs1125849	0.19	0.19	0.172	0.210463	0.1491	0.3393	0.2882	0.0333	0.3252	0.15	0.37	0.25	0.02	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.759354	1.759354	NA	NA	NA	NA	0.167	NA	3.8509
1267	20	1650577	1650577	G	A	intergenic	SIRPG,LOC100289473	dist=12152;dist=103434	NA	NA	ncRNA_exonic	ENSG00000223750	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs2273331	0.1	0.1	0.099	0.0854633	0.1491	0.0446	0.0793	0.1051	0.0399	0.14	0.05	0.09	0.1	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.537733	NA	NA	NA	NA	NA	0.116	NA	3.8509
1267	20	1651660	1651660	T	C	intergenic	SIRPG,LOC100289473	dist=13235;dist=102351	NA	NA	ncRNA_exonic	ENSG00000223750	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs732427	0.11	0.11	0.114	0.0970447	0.1491	0.0437	0.0836	0.1475	0.0399	0.14	0.05	0.1	0.14	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.837064	NA	NA	NA	NA	NA	0.13	NA	3.8509
1267	10	27475275	27475275	T	C	intronic	MASTL	NA	NA	NA	intronic	ENSG00000120539	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs73598041	0.04	0.04	0.034	0.0435304	0.0527	0.004	0.0317	0.0802	0.0337	0.05	0.0035	0.04	0.06	0.0467	0.081	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.722328	NA	NA	0.05	0.081026	NA	0.051	NA	3.8506
1267	6	28483411	28483411	C	T	intronic	GPX6	NA	NA	NA	intronic	ENSG00000198704	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs6920813	0.1	0.1	0.08	0.0888578	0.0378	0.248	0.1167	0.0015	0.0757	0.04	0.26	0.1	0.0041	0.0711	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.173121	NA	NA	0.040638	0.011324	NA	0.094	NA	3.850462
1267	2	109123996	109123996	T	G	intronic	GCC2	NA	NA	NA	ncRNA_exonic	ENSG00000214184	NA	NA	NA	NA	NA	2q12.3	NA	NA	NA	NA	rs2577596	0.16	0.16	0.225	0.183107	0.174	0.0685	0.0922	0.2973	0.2209	0.18	0.06	0.1	0.31	0.1662	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.142665	NA	NA	0.142708	0.245005	NA	0.319	NA	3.8504253
1267	1	8415682	8415682	C	T	intronic	RERE	NA	NA	NA	intronic	ENSG00000142599	NA	NA	NA	NA	NA	1p36.23	NA	NA	NA	NA	rs41278972	0.03	0.03	0.027	0.0263578	0.0586	0.0228	0.0461	0.0023	0.0153	0.06	0.01	0.05	0.01	0.0478	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.485111	NA	NA	0.04354	0.009588	NA	0.014	NA	3.85006
1267	5	126206303	126206303	C	T	UTR3	MARCH3	NM_178450:c.*22G>A	NA	NA	UTR3	ENSG00000173926	ENST00000308660:c.*22G>A	NA	NA	NA	NA	5q23.2	NA	NA	NA	NA	rs34150806	0.14	0.14	NA	0.130192	0.159	0.1845	0.2983	0.0076	0.091	0.16	0.16	0.25	0.01	0.1707	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.121686	NA	NA	0.153605	0.036768	ID=COSN167546;OCCURENCE=2(large_intestine)	0.152	NA	3.8500284
1267	1	183212171	183212171	C	A	intronic	LAMC2	NA	NA	NA	intronic	ENSG00000058085	NA	NA	NA	NA	NA	1q25.3	NA	NA	NA	NA	rs3768594	0.3	0.3	0.3	0.310503	0.1501	0.3671	0.3141	0.3737	0.3292	0.16	0.39	0.29	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.600768	NA	NA	NA	NA	NA	0.225	NA	3.8499
1267	3	195377651	195377651	T	C	intergenic	APOD,SDHAP2	dist=66575;dist=7259	NA	NA	ncRNA_exonic	ENSG00000271662	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs139047772	0.11	0.11	0.043	0.0577077	0.1501	0.001	0.0749	0.0212	0.0583	0.17	0.03	0.14	0.09	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.708209	NA	1	NA	NA	NA	NA	NA	3.8499
1267	4	166935465	166935465	A	C	intronic	TLL1	NA	NA	NA	intronic	ENSG00000038295	NA	NA	NA	NA	NA	4q32.3	NA	NA	NA	NA	rs56706178	0.11	0.11	NA	0.108027	0.1501	0.0714	0.1081	0.1021	0.1104	0.15	0.08	0.09	0.11	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.299867	NA	NA	NA	NA	NA	0.087	NA	3.8499
1267	9	35724448	35724448	G	A	intronic	TLN1	NA	NA	NA	intronic	ENSG00000137076	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs41277065	0.06	0.06	0.059	0.0455272	0.1501	0.001	0.072	0.0091	0.0143	0.14	0.0017	0.08	0.01	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.759751	NA	NA	NA	NA	NA	0.029	NA	3.8499
1267	9	95991895	95991895	T	C	intronic	WNK2	NA	NA	NA	intronic	ENSG00000165238	NA	NA	NA	NA	NA	9q22.31	NA	NA	NA	NA	rs7874101	0.15	0.15	0.151	0.197284	0.1501	0.1319	0.1254	0.2405	0.3057	0.15	0.1	0.12	0.23	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.681653	NA	NA	NA	NA	NA	0.159	NA	3.8499
1267	19	13386860	13386860	C	T	intronic	CACNA1A	NA	NA	NA	intronic	ENSG00000141837	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs7257254	0.29	0.29	0.291	0.314497	0.1501	0.621	0.2608	0.1672	0.4049	0.15	0.61	0.24	0.17	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.575756	1.575756	NA	NA	NA	NA	0.275	NA	3.8499
1267	20	36760559	36760559	G	A	intronic	TGM2	NA	NA	NA	intronic	ENSG00000198959	NA	NA	NA	NA	NA	20q11.23	NA	NA	NA	NA	rs2076383	0.24	0.24	0.238	0.23722	0.1501	0.3274	0.1354	0.2829	0.2444	0.16	0.38	0.13	0.28	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.897083	NA	NA	NA	NA	NA	0.239	NA	3.8499
1267	20	36760568	36760568	A	G	intronic	TGM2	NA	NA	NA	intronic	ENSG00000198959	NA	NA	NA	NA	NA	20q11.23	NA	NA	NA	NA	rs2076384	0.24	0.24	0.23	0.23742	0.1501	0.3284	0.1354	0.2829	0.2444	0.16	0.38	0.13	0.28	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.58853	NA	NA	NA	NA	NA	0.239	NA	3.8499
1267	20	36760598	36760598	A	G	intronic	TGM2	NA	NA	NA	intronic	ENSG00000198959	NA	NA	NA	NA	NA	20q11.23	NA	NA	NA	NA	rs2076385	0.24	0.24	0.23	0.23722	0.1501	0.3274	0.1354	0.2829	0.2444	0.16	0.38	0.13	0.28	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.070989	NA	NA	NA	NA	NA	0.239	NA	3.8499
1267	5	150646780	150646780	A	C	intronic	GM2A	NA	NA	NA	UTR3	ENSG00000196743	ENST00000523004:c.*294A>C	NA	NA	NA	NA	5q33.1	NA	NA	NA	NA	rs2075783	0.24	0.24	0.205	0.247404	0.3171	0.2698	0.4496	0.0212	0.3149	0.3	0.26	0.38	0.03	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.654943	NA	NA	NA	NA	NA	0.246	NA	3.8495667
1267	1	160924426	160924426	G	A	intronic	ITLN2	NA	NA	NA	intronic	ENSG00000158764	NA	NA	NA	NA	NA	1q23.3	NA	NA	NA	NA	rs12401642	0.11	0.11	0.102	0.123802	0.0755	0.1845	0.1715	0.0461	0.182	0.07	0.22	0.13	0.04	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.138062	NA	NA	0.07511	0.055636	NA	0.109	NA	3.84939
1267	10	101606683	101606683	G	A	intronic	ABCC2	NA	NA	NA	intronic	ENSG00000023839	NA	NA	NA	NA	NA	10q24.2	NA	NA	NA	NA	rs3740064	0.08	0.08	0.093	0.0796725	0.0487	0.0228	0.0692	0.202	0.0123	0.04	0.03	0.07	0.21	0.0545	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.150239	NA	NA	0.047442	0.170676	NA	0.08	NA	3.849358
1267	18	47363009	47363009	C	T	intronic	MYO5B	NA	NA	NA	ncRNA_intronic	ENSG00000267322	NA	NA	NA	NA	NA	18q21.1	NA	NA	NA	NA	rs621101	0.35	0.35	0.365	0.344848	0.4841	0.1181	0.3415	0.438	0.3119	0.46	0.12	0.39	0.42	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.03869	NA	NA	NA	NA	NA	0.384	NA	3.8492333
1267	1	55518198	55518198	C	A	intronic	PCSK9	NA	NA	NA	intronic	ENSG00000169174	NA	NA	NA	NA	NA	1p32.3	NA	NA	NA	NA	rs7552350	NA	NA	0.235	0.138578	0.1511	0.0446	0.1369	0.2269	0.1043	NA	NA	NA	NA	NA	0.098	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.368964	NA	NA	NA	NA	NA	0.072	NA	3.8489
1267	7	151322503	151322503	A	C	intronic	PRKAG2	NA	NA	NA	intronic	ENSG00000106617	NA	NA	NA	NA	NA	7q36.1	NA	NA	NA	NA	rs73478069	0.12	0.12	0.102	0.121206	0.1511	0.0198	0.1196	0.2141	0.0706	0.14	0.02	0.13	0.19	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.515204	NA	NA	NA	NA	NA	0.181	NA	3.8489
1267	17	42335685	42335685	G	A	intronic	SLC4A1	NA	NA	NA	intronic	ENSG00000004939,ENSG00000268413	NA	NA	NA	NA	NA	17q21.31	NA	NA	NA	NA	rs13306775	0.16	0.16	0.164	0.159944	0.1511	0.0605	0.1153	0.3147	0.0941	0.14	0.08	0.13	0.31	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.86808	NA	NA	NA	NA	NA	0.217	NA	3.8489
1267	21	42860494	42860494	C	G	intronic	TMPRSS2	NA	NA	NA	intronic	ENSG00000184012	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs3819138	0.09	0.09	0.087	0.0684904	0.1511	0.0486	0.0879	0.0091	0.0706	0.16	0.06	0.09	0.02	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.094111	NA	NA	NA	NA	NA	0.051	NA	3.8489
1267	22	16287155	16287155	G	T	intronic	POTEH	NA	NA	NA	intronic	ENSG00000198062	NA	NA	NA	NA	NA	22q11.1	NA	NA	NA	NA	rs73877828	0.15	0.15	0.153	0.170927	0.1511	0.256	0.0735	0.1551	0.1943	0.14	0.22	0.09	0.13	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.000002	NA	NA	NA	NA	NA	0.036	NA	3.8489
1267	10	102009980	102009980	T	C	intronic	CWF19L1	NA	NA	NA	intronic	ENSG00000095485	NA	NA	NA	NA	NA	10q24.31	NA	NA	NA	NA	rs7072367	0.08	0.08	0.073	0.0934505	0.0487	0.0615	0.0548	0.1725	0.093	0.05	0.07	0.06	0.13	0.0566	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.151295	NA	NA	0.04593	0.133	NA	0.058	NA	3.84877
1267	10	102003579	102003579	C	G	intronic	CWF19L1	NA	NA	NA	intronic	ENSG00000095485	NA	NA	NA	NA	NA	10q24.31	NA	NA	NA	NA	rs35616070	0.08	0.08	0.079	0.0934505	0.0487	0.0615	0.0548	0.1725	0.093	0.05	0.07	0.06	0.13	0.0565	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.010529	2.010529	NA	0.046395	0.134589	NA	0.058	NA	3.848405
1267	19	6896380	6896380	G	A	intronic	EMR1	NA	NA	NA	intronic	ENSG00000174837	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs10406373	0.07	0.07	0.078	0.0810703	0.0408	0.003	0.0346	0.2239	0.0429	0.04	NA	0.04	0.25	0.0577	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.670798	NA	NA	0.053372	0.196323	NA	0.094	NA	3.848128
1267	1	37307281	37307281	T	G	intronic	GRIK3	NA	NA	NA	intronic	ENSG00000163873	NA	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	rs553882	0.14	0.14	0.127	0.154353	0.1521	0.0774	0.1023	0.2398	0.1575	0.14	0.06	0.12	0.26	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.350862	NA	NA	NA	NA	NA	0.196	NA	3.8479
1267	3	42019392	42019392	C	T	intergenic	ULK4,TRAK1	dist=15732;dist=113354	NA	NA	ncRNA_exonic	ENSG00000235339	NA	NA	NA	NA	NA	3p22.1	NA	NA	NA	NA	rs17218936	0.08	0.08	0.075	0.076278	0.1521	0.002	0.0821	0.0545	0.1002	0.16	0.0035	0.09	0.06	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.79342	NA	NA	NA	NA	NA	0.123	NA	3.8479
1267	15	33893567	33893567	C	G	intronic	RYR3	NA	NA	NA	intronic	ENSG00000198838	NA	NA	NA	NA	NA	15q14	NA	NA	NA	NA	rs12906396	0.14	0.14	0.125	0.135583	0.1521	0.124	0.1124	0.1415	0.1391	0.15	0.12	0.13	0.16	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.735013	NA	NA	NA	NA	NA	0.123	NA	3.8479
1267	19	43421728	43421728	A	G	intronic	PSG6	NA	NA	NA	intronic	ENSG00000170848	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs57975345	0.12	0.12	0.089	0.110623	0.1521	0.003	0.2233	0.0893	0.1278	0.16	0.0017	0.22	0.12	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.769901	NA	NA	NA	NA	NA	0.174	NA	3.8479
1267	17	45367669	45367669	G	A	intronic	ITGB3	NA	NA	NA	intronic	ENSG00000259207,ENSG00000259753	NA	NA	NA	NA	NA	17q21.32	NA	NA	NA	NA	rs16941829	0.03	0.03	0.014	0.0221645	0.0507	NA	0.0634	0.0045	0.0102	0.04	NA	0.08	0.0041	0.0433	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.368054	NA	NA	0.058256	0.014299	NA	0.007	NA	3.847744
1267	11	9305177	9305177	C	T	intronic	TMEM41B	NA	NA	NA	intronic	ENSG00000166471	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs72861351	0.02	0.02	0.024	0.014976	0.0527	NA	0.0101	0.0015	0.0133	0.06	NA	0.01	0.002	0.0467	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.672207	1.672207	NA	0.052969	0.007497	NA	0.029	NA	3.847631
1267	14	70714172	70714172	T	C	ncRNA_exonic	ADAM21P1	NA	NA	NA	ncRNA_exonic	ENSG00000235812	NA	NA	NA	NA	NA	14q24.2	NA	NA	NA	NA	rs4899341	NA	NA	0.584	0.749201	0.8191	0.7212	0.8573	0.5461	0.9039	NA	NA	NA	NA	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.083543	NA	NA	NA	NA	NA	0.543	NA	3.8475666
1267	1	1684169	1684169	C	G	UTR3	NADK	NM_001198995:c.*174G>C,NM_023018:c.*174G>C,NM_001198993:c.*174G>C,NM_001198994:c.*174G>C	NA	NA	UTR3	ENSG00000008130	ENST00000378625:c.*174G>C,ENST00000341991:c.*174G>C,ENST00000341426:c.*174G>C,ENST00000344463:c.*174G>C,ENST00000342348:c.*174G>C	NA	NA	NA	NA	1p36.33	NA	NA	NA	NA	rs7796	0.36	0.36	0.284	0.326278	0.4861	0.3452	0.5591	0.0469	0.3548	0.5	0.33	0.52	0.06	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.118768	NA	NA	NA	NA	NA	0.254	NA	3.8472334
1267	17	3921118	3921118	C	T	intronic	ZZEF1	NA	NA	NA	intronic	ENSG00000074755	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs118017571	0.03	0.03	0.022	0.0247604	0.0577	NA	0.036	0.0083	0.0307	0.07	NA	0.05	0.01	0.0431	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.372114	NA	NA	0.052093	0.014072	NA	0.087	NA	3.847107
1267	6	13949295	13949295	A	G	intronic	RNF182	NA	NA	NA	intronic	ENSG00000180537	NA	NA	NA	NA	NA	6p23	NA	NA	NA	NA	rs28588958	0.22	0.22	0.216	0.24401	0.1531	0.4911	0.1268	0.1778	0.2556	0.16	0.41	0.14	0.16	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.69058	NA	NA	NA	NA	NA	0.145	NA	3.8469
1267	7	101559302	101559302	C	G	intronic	CUX1	NA	NA	NA	intronic	ENSG00000257923	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs10231075	0.19	0.19	0.199	0.22484	0.1531	0.0159	0.1556	0.4728	0.228	0.16	0.02	0.19	0.45	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.509917	NA	NA	NA	NA	NA	0.275	NA	3.8469
1267	12	120614093	120614093	C	T	intronic	GCN1L1	NA	NA	NA	intronic	ENSG00000089154	NA	NA	NA	NA	NA	12q24.23	NA	NA	NA	NA	rs2269945	0.3	0.3	0.28	0.28095	0.1531	0.5655	0.1297	0.2829	0.2239	0.16	0.57	0.15	0.3	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.420759	NA	NA	NA	NA	NA	0.145	NA	3.8469
1267	13	77562630	77562630	C	G	intergenic	IRG1,CLN5	dist=29854;dist=3429	NA	NA	downstream	ENSG00000228002	NA	NA	NA	Score=586;Name=lod=321	NA	13q22.3	NA	NA	NA	NA	rs649291	0.42	0.42	0.396	0.371805	0.6531	0.2272	0.4352	0.2549	0.3446	0.65	0.24	0.51	0.21	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.099474	NA	NA	NA	NA	NA	0.341	NA	3.8469
1267	17	30375698	30375698	G	C	intronic	LRRC37B	NA	NA	NA	intronic	ENSG00000185158	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs2957920	0.18	0.18	0.16	0.19349	0.1531	0.0397	0.1167	0.4047	0.1626	0.16	0.04	0.12	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.606847	NA	NA	NA	NA	NA	0.29	NA	3.8469
1267	19	53077258	53077258	G	A	intronic	ZNF701	NA	NA	NA	intronic	ENSG00000167562	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs75491966	0.09	0.09	0.069	0.08127	0.1531	0.002	0.1441	0.0454	0.093	0.15	NA	0.13	0.05	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.192089	NA	NA	NA	NA	NA	0.145	NA	3.8469
1267	19	53077515	53077515	C	G	intronic	ZNF701	NA	NA	NA	intronic	ENSG00000167562	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs58919804	0.09	0.09	0.07	0.08127	0.1531	0.002	0.1441	0.0454	0.093	0.15	NA	0.13	0.05	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.982609	NA	NA	NA	NA	NA	0.145	NA	3.8469
1267	20	36718059	36718059	G	A	intronic	RPRD1B	NA	NA	NA	intronic	ENSG00000101413	NA	NA	NA	NA	NA	20q11.23	NA	NA	NA	NA	rs3746466	0.21	0.21	0.22	0.255391	0.1531	0.2103	0.1311	0.4032	0.2955	0.16	0.17	0.15	0.38	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.957956	NA	NA	NA	NA	NA	0.152	NA	3.8469
1267	11	128842251	128842251	G	T	intronic	ARHGAP32	NA	NA	NA	UTR3	ENSG00000134909	ENST00000524655:c.*1736C>A	NA	NA	NA	NA	11q24.3	NA	NA	NA	NA	rs76301868	0.3	0.3	0.271	0.247604	0.3201	0.3006	0.3689	0.1732	0.1329	0.3	0.31	0.37	0.22	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.431581	NA	NA	NA	NA	NA	0.167	NA	3.8465667
1267	6	44121947	44121947	C	T	intronic	TMEM63B	NA	NA	NA	intronic	ENSG00000137216	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs2277127	0.14	0.14	0.148	0.132987	0.0457	0.2183	0.1614	0.1611	0.0767	0.05	0.26	0.14	0.16	0.0805	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.576432	NA	NA	0.027558	0.130277	NA	0.109	NA	3.846242
1267	19	1074315	1074315	C	T	intronic	HMHA1	NA	NA	NA	intronic	ENSG00000180448	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs12974537	0.04	0.04	NA	0.0311502	0.0895	0.006	0.0605	0.0068	0.0092	0.08	0.0035	0.08	0.01	0.0643	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.148223	NA	NA	NA	NA	NA	0.08	NA	3.8462
1267	17	4645612	4645612	C	T	intronic	ZMYND15	NA	NA	NA	intronic	ENSG00000141497	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs4790697	0.03	0.03	0.023	0.0297524	0.0507	NA	0.0994	0.0083	0.0184	0.06	NA	0.07	0.01	0.0494	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.210785	NA	NA	0.053721	0.014299	NA	0.08	NA	3.846179
1267	14	56145018	56145018	A	T	intronic	KTN1	NA	NA	NA	intronic	ENSG00000126777	NA	NA	NA	NA	NA	14q22.3	NA	NA	NA	NA	rs45458197	0.04	0.04	0.02	0.0397364	0.0606	0.0129	0.0692	0.0023	0.0757	0.06	0.01	0.07	0.0041	NA	0.093	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.070007	NA	NA	0.093348	0.020089	NA	0.007	NA	3.846052
1267	3	179533826	179533826	T	C	intronic	PEX5L	NA	NA	NA	intronic	ENSG00000114757	NA	NA	NA	NA	NA	3q26.33	NA	NA	NA	NA	rs17690759	0.02	0.02	0.023	0.0185703	0.0577	NA	0.0187	0.003	0.0184	0.06	NA	0.02	0.0041	0.0394	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.001215	NA	NA	0.05686	0.011575	NA	0.065	NA	3.84604
1267	3	186384015	186384015	C	T	intronic	HRG	NA	NA	NA	intronic	ENSG00000113905	NA	NA	NA	NA	NA	3q27.3	NA	NA	NA	NA	rs11707899	0.09	0.09	0.092	0.0992412	0.0497	0.0883	0.0735	0.1997	0.044	0.04	0.07	0.09	0.2	0.0564	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.83844	NA	NA	0.047907	0.150931	NA	0.101	NA	3.845993
1267	7	1538021	1538021	G	A	intronic	INTS1	NA	NA	NA	intronic	ENSG00000164880	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs11761394	0.03	0.03	0.026	0.0167732	0.0557	NA	0.0288	0.0015	0.0061	0.06	NA	0.04	0.0041	0.0434	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.39111	NA	NA	0.054941	0.0115	NA	0.022	NA	3.845959
1267	1	18661583	18661583	T	C	intronic	IGSF21	NA	NA	NA	intronic	ENSG00000117154	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs536540	0.33	0.33	0.348	0.38099	0.1541	0.3502	0.2695	0.7436	0.2352	0.14	0.32	0.23	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.374639	NA	NA	NA	NA	NA	0.478	NA	3.8459
1267	1	226576270	226576270	A	G	intronic	PARP1	NA	NA	NA	intronic	ENSG00000143799	NA	NA	NA	NA	NA	1q42.12	NA	NA	NA	NA	rs2255403	0.29	0.29	0.256	0.252196	0.1541	0.4841	0.3559	0.1415	0.1902	0.17	0.52	0.33	0.16	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.269953	NA	NA	NA	NA	NA	0.225	NA	3.8459
1267	6	41059169	41059169	G	A	intronic	NFYA	NA	NA	NA	intronic	ENSG00000001167,ENSG00000124596	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs10080924	0.18	0.18	0.2	0.211462	0.1541	0.0099	0.1297	0.5242	0.1135	0.15	0.01	0.12	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.391547	NA	NA	NA	NA	NA	0.275	NA	3.8459
1267	6	69728452	69728452	C	T	intronic	BAI3	NA	NA	NA	intronic	ENSG00000135298	NA	NA	NA	NA	NA	6q12	NA	NA	NA	NA	rs10485430	0.12	0.12	0.106	0.101837	0.1541	0.0565	0.1009	0.1195	0.0716	0.15	0.07	0.1	0.14	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.994152	NA	NA	NA	NA	NA	0.094	NA	3.8459
1267	7	154897972	154897972	T	C	intergenic	HTR5A,INSIG1	dist=18870;dist=191514	NA	NA	upstream	ENSG00000228806	NA	NA	NA	Score=664;Name=lod=666	NA	7q36.2	NA	NA	NA	NA	rs1618158	0.7	0.7	0.706	0.701478	0.6541	0.747	0.7147	0.6967	0.7004	0.64	0.78	0.68	0.71	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.223589	NA	NA	NA	NA	NA	0.667	NA	3.8459
1267	16	57756564	57756564	G	A	intronic	CCDC135	NA	NA	NA	intronic	ENSG00000159625	NA	NA	NA	NA	NA	16q21	NA	NA	NA	NA	rs3826094	0.23	0.23	0.198	0.223043	0.1541	0.2837	0.2594	0.2602	0.1554	0.16	0.26	0.23	0.3	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.048912	NA	NA	NA	NA	NA	0.181	NA	3.8459
1267	3	50368955	50368955	C	A	intronic	RASSF1	NA	NA	NA	intronic	ENSG00000068028	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs73082910	0.03	0.03	0.014	0.0213658	0.0547	NA	0.0346	0.0038	0.0235	0.06	NA	0.04	0.01	0.0455	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.782748	NA	NA	0.054186	0.010672	NA	0.014	NA	3.845614
1267	6	44108848	44108848	C	T	intronic	TMEM63B	NA	NA	NA	intronic	ENSG00000137216	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs12528844	0.14	0.14	0.128	0.120807	0.0477	0.2242	0.1527	0.1157	0.0736	0.05	0.26	0.13	0.13	0.0786	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.683883	1.683883	NA	0.028256	0.093055	NA	0.094	NA	3.845444
1267	22	46792689	46792689	C	A	intronic	CELSR1	NA	NA	NA	intronic	ENSG00000075275	NA	NA	NA	NA	NA	22q13.31	NA	NA	NA	NA	rs74788410	0.04	0.04	0.033	0.0341454	0.0547	NA	0.0303	0.056	0.0215	0.05	NA	0.03	0.1	0.0457	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.290373	NA	NA	0.054328	0.040663	NA	0.029	NA	3.845272
1268	6	44107189	44107189	C	T	intronic	TMEM63B	NA	NA	NA	intronic	ENSG00000137216	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs35174285	0.14	0.14	0.126	0.122204	0.0477	0.2232	0.1527	0.1172	0.0798	0.05	0.26	0.13	0.13	0.0791	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.396118	NA	NA	0.028256	0.093736	NA	0.101	NA	3.844944
1268	5	38881603	38881603	G	T	intronic	OSMR	NA	NA	NA	intronic	ENSG00000145623	NA	NA	NA	NA	NA	5p13.1	NA	NA	NA	NA	rs2278324	0.1	0.1	0.087	0.090655	0.1551	0.0298	0.0865	0.0643	0.1258	0.17	0.03	0.1	0.06	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.183656	NA	NA	NA	NA	NA	0.072	NA	3.8449
1268	7	154898078	154898078	T	C	intergenic	HTR5A,INSIG1	dist=18976;dist=191408	NA	NA	upstream	ENSG00000228806	NA	NA	NA	Score=664;Name=lod=666	NA	7q36.2	NA	NA	NA	NA	rs1619015	0.71	0.71	0.71	0.705471	0.6551	0.748	0.7147	0.711	0.6994	0.64	0.78	0.68	0.74	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.199009	NA	NA	NA	NA	NA	0.667	NA	3.8449
1268	9	95887108	95887108	C	T	intronic	NINJ1	NA	NA	NA	intronic	ENSG00000131669	NA	NA	NA	NA	NA	9q22.31	NA	NA	NA	NA	rs13299270	0.12	0.12	0.129	0.102436	0.1551	0.005	0.0634	0.2057	0.0368	0.16	0.0017	0.08	0.23	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.522841	NA	NA	NA	NA	NA	0.13	NA	3.8449
1268	11	67742354	67742354	C	A	intergenic	FAM86C2P,UNC93B1	dist=169547;dist=16221	NA	NA	ncRNA_exonic	ENSG00000255554	NA	NA	NA	NA	NA	11q13.2	NA	NA	NA	NA	rs11228105	0.13	0.13	0.109	0.137181	0.1551	0.1528	0.1254	0.0908	0.1738	0.15	0.16	0.13	0.07	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.703488	NA	NA	NA	NA	NA	0.043	NA	3.8449
1268	11	67742518	67742518	A	G	intergenic	FAM86C2P,UNC93B1	dist=169711;dist=16057	NA	NA	ncRNA_exonic	ENSG00000255554	NA	NA	NA	NA	NA	11q13.2	NA	NA	NA	NA	rs4014567	0.11	0.11	0.092	0.136781	0.1551	0.1518	0.1268	0.0908	0.1718	0.12	0.15	0.11	0.06	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.477287	NA	NA	NA	NA	NA	0.022	NA	3.8449
1268	12	109541171	109541171	T	C	intronic	UNG	NA	NA	NA	intronic	ENSG00000076248	NA	NA	NA	NA	NA	12q24.11	NA	NA	NA	NA	rs2569987	0.08	0.08	0.074	0.0595048	0.1551	NA	0.098	0.028	0.0378	0.15	NA	0.11	0.03	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.406476	NA	NA	NA	NA	NA	0.101	NA	3.8449
1268	12	120602078	120602078	T	G	intronic	GCN1L1	NA	NA	NA	intronic	ENSG00000089154	NA	NA	NA	NA	NA	12q24.23	NA	NA	NA	NA	rs2286049	0.34	0.34	0.341	0.335663	0.1551	0.5665	0.1441	0.4773	0.228	0.16	0.58	0.17	0.49	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.63616	NA	NA	NA	NA	NA	0.225	NA	3.8449
1268	18	14542569	14542569	G	A	intronic	POTEC	NA	NA	NA	intronic	ENSG00000183206	NA	NA	NA	NA	NA	18p11.21	NA	NA	NA	NA	rs9807187	0.29	0.29	0.173	0.303514	0.1551	0.5099	0.2608	0.2821	0.3027	0.16	0.46	0.27	0.28	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.655643	NA	NA	NA	NA	NA	NA	NA	3.8449
1268	6	26428842	26428842	A	G	ncRNA_intronic	BTN2A3P	NA	NA	NA	ncRNA_intronic	ENSG00000124549	NA	NA	NA	NA	NA	6p22.2	NA	NA	NA	NA	rs1741740	0.82	0.82	0.828	0.832668	0.8221	0.75	0.7608	0.9788	0.7822	0.82	0.72	0.8	0.98	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.210216	NA	NA	NA	NA	NA	0.906	NA	3.8445666
1268	16	68863752	68863752	G	A	intronic	CDH1	NA	NA	NA	intronic	ENSG00000039068	NA	NA	NA	NA	NA	16q22.1	NA	NA	NA	NA	rs33965115	0.02	0.02	0.015	0.019369	0.0467	NA	0.0245	0.0053	0.0266	0.04	NA	0.04	0.01	0.0492	0.059	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.55565	NA	NA	0.05955	0.013994	NA	0.065	NA	3.84455
1268	11	35395940	35395940	A	G	intronic	SLC1A2	NA	NA	NA	ncRNA_exonic	ENSG00000215380	NA	NA	NA	NA	NA	11p13	NA	NA	NA	NA	rs1923300	0.54	0.54	0.502	0.548323	0.4891	0.7401	0.611	0.3275	0.6656	0.5	0.74	0.6	0.35	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.958619	NA	NA	NA	NA	NA	0.493	NA	3.8442333
1268	20	9401940	9401940	A	G	intronic	PLCB4	NA	NA	NA	intronic	ENSG00000101333	NA	NA	NA	NA	NA	20p12.2	NA	NA	NA	NA	rs6056609	0.14	0.14	0.113	0.14377	0.0447	0.2381	0.1599	0.1906	0.0736	0.05	0.22	0.15	0.17	0.0722	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.213896	NA	NA	0.039186	0.155243	NA	0.058	NA	3.843914
1268	1	40209408	40209408	A	G	intronic	PPIE	NA	NA	NA	intronic	ENSG00000084072	NA	NA	NA	NA	NA	1p34.2	NA	NA	NA	NA	rs491164	0.09	0.09	0.08	0.0836661	0.1561	NA	0.1455	0.059	0.0849	0.15	NA	0.15	0.07	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.122491	3.122491	NA	NA	NA	NA	0.159	NA	3.8439
1268	5	9202419	9202419	T	C	intronic	SEMA5A	NA	NA	NA	intronic	ENSG00000112902	NA	NA	NA	NA	NA	5p15.31	NA	NA	NA	NA	rs1805974	0.15	0.15	0.134	0.164137	0.1561	0.1468	0.3285	0.0643	0.2086	0.16	0.13	0.28	0.05	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.68698	NA	NA	NA	NA	NA	0.159	NA	3.8439
1268	13	42144480	42144480	T	C	intronic	VWA8	NA	NA	NA	intronic	ENSG00000102763	NA	NA	NA	NA	NA	13q14.11	NA	NA	NA	NA	rs9566791	0.28	0.28	0.276	0.304912	0.1561	0.378	0.3112	0.3676	0.2935	0.16	0.35	0.26	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.097268	NA	NA	NA	NA	NA	0.21	NA	3.8439
1268	19	8137192	8137192	C	T	intronic	FBN3	NA	NA	NA	intronic	ENSG00000142449	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs17160134	0.14	0.14	0.134	0.1252	0.1561	0.1151	0.1066	0.1165	0.1288	0.16	0.12	0.12	0.12	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.642142	NA	NA	NA	NA	NA	0.196	NA	3.8439
1268	1	103364618	103364618	A	T	intronic	COL11A1	NA	NA	NA	intronic	ENSG00000060718	NA	NA	NA	NA	NA	1p21.1	NA	NA	NA	NA	rs1676498	0.1	0.1	0.1	0.0904553	0.0835	0.0655	0.0533	0.1694	0.0429	0.08	0.07	0.05	0.19	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.072958	NA	NA	0.072642	0.133671	NA	0.072	NA	3.843858
1268	16	85704584	85704584	A	G	intronic	GSE1	NA	NA	NA	intronic	ENSG00000131149	NA	NA	NA	NA	NA	16q24.1	Score=784;Name=V$EVI1_01	NA	NA	NA	rs2303202	0.38	0.38	0.352	0.379992	0.3688	0.5069	0.3256	0.2209	0.5143	0.39	0.52	0.33	0.23	0.4019	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.61075	NA	NA	0.385581	0.275705	NA	0.261	NA	3.843719
1268	9	136577848	136577848	C	T	intronic	SARDH	NA	NA	NA	intronic	ENSG00000123453	NA	NA	NA	NA	NA	9q34.2	NA	NA	NA	NA	rs45581441	0.04	0.04	0.041	0.0321486	0.0527	0.001	0.0648	0.0408	0.0082	0.06	0.0017	0.07	0.04	0.0455	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.678647	NA	NA	0.058269	0.036995	NA	0.043	NA	3.843531
1268	12	12633287	12633287	A	G	intronic	DUSP16	NA	NA	NA	intronic	ENSG00000111266	NA	NA	NA	NA	NA	12p13.2	NA	NA	NA	NA	rs10845555	0.14	0.14	0.132	0.188898	0.0348	0.4097	0.1037	0.1112	0.2853	0.04	0.36	0.07	0.09	0.1009	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.506992	1.506992	NA	0.020814	0.091012	NA	0.13	NA	3.843486
1268	6	44120293	44120293	C	T	intronic	TMEM63B	NA	NA	NA	intronic	ENSG00000137216	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs79582609	0.14	0.14	0.135	0.127396	0.0477	0.2242	0.1614	0.1346	0.0757	0.05	0.26	0.14	0.13	0.0805	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.541483	1.541483	NA	0.028372	0.111666	NA	0.094	NA	3.843428
1268	1	65860687	65860687	A	C	exonic	DNAJC6	NA	synonymous SNV	DNAJC6:NM_001256864:exon13:c.A2010C:p.P670P,DNAJC6:NM_014787:exon13:c.A1839C:p.P613P,DNAJC6:NM_001256865:exon14:c.A1800C:p.P600P	exonic	ENSG00000116675	NA	synonymous SNV	ENSG00000116675:ENST00000371069:exon13:c.A2010C:p.P670P,ENSG00000116675:ENST00000395325:exon13:c.A1839C:p.P613P,ENSG00000116675:ENST00000263441:exon14:c.A1800C:p.P600P	NA	NA	1p31.3	NA	NA	NA	NA	rs4582839	0.73	0.73	0.762	0.757788	0.5924	0.7927	0.6282	0.9811	0.682	0.59	0.78	0.64	0.98	0.6468	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.961999	NA	NA	0.58407	0.912846	NA	0.688	NA	3.8433966
1268	2	234091159	234091159	G	A	intronic	INPP5D	NA	NA	NA	intronic	ENSG00000168918	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs11693000	0.03	0.03	0.031	0.0271565	0.0795	0.002	0.0447	0.0061	0.0153	0.06	NA	0.05	0.01	0.0488	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.605139	NA	NA	0.028452	0.005087	NA	NA	NA	3.843248
1268	9	35707677	35707677	G	A	intronic	TLN1	NA	NA	NA	intronic	ENSG00000137076	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs56221655	0.03	0.03	0.018	0.0183706	0.0586	NA	0.0274	0.0061	0.0061	0.06	NA	0.02	0.0041	0.0394	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.181987	NA	NA	0.058837	0.011575	NA	0.007	NA	3.843163
1268	3	196022961	196022961	G	T	intronic	TCTEX1D2	NA	NA	NA	intronic	ENSG00000213123	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs75016149	0.05	0.05	0.048	0.0397364	0.0517	0.0972	0.0245	0.0076	0.0225	0.05	0.11	0.02	0.0041	0.0465	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.052725	NA	NA	0.058721	0.020654	NA	0.014	NA	3.843079
1268	12	56827753	56827753	A	G	intronic	TIMELESS	NA	NA	NA	intronic	ENSG00000111602	NA	NA	NA	NA	NA	12q13.3	NA	NA	NA	NA	rs34697596	0.03	0.03	0.025	0.0211661	0.0527	NA	0.0375	0.0113	0.0123	0.04	NA	0.05	0.03	0.0431	0.061	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.676445	NA	NA	0.061279	0.017703	NA	0.014	NA	3.842921
1268	1	183184524	183184524	C	T	intronic	LAMC2	NA	NA	NA	intronic	ENSG00000058085	NA	NA	NA	NA	NA	1q25.3	NA	NA	NA	NA	rs2274981	0.29	0.29	0.285	0.313898	0.1571	0.3333	0.3184	0.4024	0.3323	0.17	0.34	0.29	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.076238	NA	NA	NA	NA	ID=COSN163364;OCCURENCE=1(breast)	0.232	NA	3.8429
1268	1	183191144	183191144	C	T	intronic	LAMC2	NA	NA	NA	intronic	ENSG00000058085	NA	NA	NA	NA	NA	1q25.3	NA	NA	NA	NA	rs2296307	0.29	0.29	0.285	0.315695	0.1571	0.3363	0.3184	0.407	0.3323	0.17	0.34	0.29	0.42	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.021759	NA	NA	NA	NA	ID=COSN163365;OCCURENCE=1(NS)	0.232	NA	3.8429
1268	3	39432785	39432785	C	T	intronic	SLC25A38	NA	NA	NA	intronic	ENSG00000144659	NA	NA	NA	NA	NA	3p22.1	NA	NA	NA	NA	rs45503293	0.11	0.11	0.101	0.105431	0.1571	0.001	0.1182	0.1838	0.045	0.15	NA	0.13	0.17	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.736654	NA	NA	NA	NA	NA	0.167	NA	3.8429
1268	9	126235071	126235071	A	G	intronic	DENND1A	NA	NA	NA	intronic	ENSG00000119522	NA	NA	NA	NA	NA	9q33.3	NA	NA	NA	NA	rs59460368	0.15	0.15	0.146	0.152157	0.1571	0.1567	0.1282	0.1604	0.1483	0.16	0.16	0.12	0.16	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.578111	NA	NA	NA	NA	NA	0.21	NA	3.8429
1268	20	30147270	30147270	T	G	intronic	HM13	NA	NA	NA	intronic	ENSG00000101294	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs6059981	0.27	0.27	0.298	0.282947	0.1571	NA	0.1844	0.8275	0.0378	0.16	NA	0.2	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.565206	NA	NA	NA	NA	NA	0.333	NA	3.8429
1268	10	1070710	1070710	C	G	ncRNA_intronic	IDI2-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000232656	NA	NA	NA	NA	NA	10p15.3	NA	NA	NA	NA	rs12357207	0.22	0.22	0.228	0.232827	0.2604	0.2768	0.232	0.1014	0.3374	0.26	0.24	0.25	0.13	0.2786	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.494133	NA	NA	0.284884	0.137086	NA	0.232	NA	3.8427826
1268	11	102816356	102816356	G	A	intronic	MMP13	NA	NA	NA	intronic	ENSG00000137745	NA	NA	NA	NA	NA	11q22.2	NA	NA	NA	NA	rs3758854	0.09	0.09	0.092	0.103235	0.0437	0.1161	0.0605	0.1641	0.0992	0.05	0.09	0.07	0.17	0.0617	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.288519	NA	NA	0.051885	0.146364	ID=COSN164035;OCCURENCE=1(breast)	0.094	NA	3.842715
1268	21	15537727	15537727	A	G	intronic	LIPI	NA	NA	NA	intronic	ENSG00000188992	NA	NA	NA	NA	NA	21q11.2	NA	NA	NA	NA	rs75730972	0.09	0.09	0.079	0.091853	0.0487	0.2222	0.072	0.0514	0.0706	0.04	0.22	0.05	0.05	0.065	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.300921	NA	NA	0.043762	0.038707	NA	0.058	NA	3.842538
1268	8	28998179	28998179	A	G	intronic	KIF13B	NA	NA	NA	ncRNA_exonic	ENSG00000254129	NA	NA	NA	NA	NA	8p12	NA	NA	NA	NA	rs2246691	0.2	0.2	0.175	0.209265	0.1451	0.2371	0.3573	0.1755	0.1871	0.14	0.24	0.32	0.17	0.1936	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.866814	NA	NA	0.152328	0.163612	NA	0.254	NA	3.8423053
1268	15	51504811	51504811	A	C	intronic	CYP19A1	NA	NA	NA	ncRNA_intronic	ENSG00000259240	NA	NA	NA	NA	NA	15q21.2	NA	NA	NA	NA	rs1065779	0.42	0.42	0.421	0.378395	0.4911	0.5228	0.3458	0.2194	0.3517	0.5	0.53	0.36	0.2	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.369923	NA	NA	NA	NA	NA	0.341	NA	3.8422333
1268	15	51507508	51507508	T	C	intronic	CYP19A1	NA	NA	NA	ncRNA_intronic	ENSG00000259240	NA	NA	NA	NA	NA	15q21.2	NA	NA	NA	NA	rs2289105	0.41	0.41	0.4	0.371805	0.4911	0.5258	0.3444	0.1929	0.3517	0.5	0.53	0.36	0.17	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.132266	NA	NA	NA	NA	NA	0.326	NA	3.8422333
1268	15	78211345	78211345	A	G	ncRNA_exonic	LOC645752	NA	NA	NA	ncRNA_exonic	ENSG00000260776	NA	NA	NA	Score=251;Name=lod=14	NA	15q24.3	NA	NA	NA	NA	rs12592294	NA	NA	0.81	0.802915	0.9463	0.8671	0.7522	0.7421	0.7076	NA	NA	NA	NA	0.8782	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.255953	NA	NA	NA	NA	NA	0.232	NA	3.8421666
1268	19	47342867	47342867	A	C	intronic	AP2S1	NA	NA	NA	exonic	ENSG00000042753	NA	nonsynonymous SNV	ENSG00000042753:ENST00000352203:exon3:c.T164G:p.I55S	NA	NA	19q13.32	NA	NA	NA	NA	rs312185	0.54	0.54	0.518	0.590655	0.4066	0.5952	0.6239	0.6959	0.6094	0.39	0.57	0.63	0.67	0.4941	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.660636	NA	NA	0.423837	0.679301	NA	0.449	NA	3.8421297
1268	2	74746080	74746080	C	T	intronic	DQX1	NA	NA	NA	intronic	ENSG00000144045	NA	NA	NA	NA	NA	2p13.1	NA	NA	NA	NA	rs6709863	0.34	0.34	0.326	0.351438	0.1581	0.8185	0.2622	0.1982	0.3395	0.15	0.82	0.2	0.19	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.036423	NA	NA	NA	NA	NA	0.21	NA	3.8419
1268	5	176471284	176471284	T	C	intronic	ZNF346	NA	NA	NA	intronic	ENSG00000113761	NA	NA	NA	NA	NA	5q35.2	NA	NA	NA	NA	rs58095821	0.13	0.13	NA	0.105032	0.1581	0.1915	0.0922	0.0287	0.0736	0.17	0.17	0.12	0.03	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.96619	NA	NA	NA	NA	NA	0.159	NA	3.8419
1268	6	90390233	90390233	T	C	intronic	MDN1	NA	NA	NA	intronic	ENSG00000112159	NA	NA	NA	NA	NA	6q15	NA	NA	NA	NA	rs72913976	0.09	0.09	0.084	0.105032	0.1581	0.0486	0.085	0.0613	0.182	0.15	0.04	0.07	0.06	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000238	NA	NA	NA	NA	NA	0.138	NA	3.8419
1268	6	160494068	160494068	C	T	intronic	IGF2R	NA	NA	NA	intronic	ENSG00000197081	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs8191888	0.09	0.09	0.095	0.0876597	0.1581	0.002	0.1066	0.0787	0.1022	0.16	NA	0.13	0.09	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.220009	NA	NA	NA	NA	NA	0.109	NA	3.8419
1268	8	82539212	82539212	C	A	intergenic	FABP12,IMPA1	dist=95662;dist=29939	NA	NA	ncRNA_intronic	ENSG00000251521	NA	NA	NA	NA	NA	8q21.13	NA	NA	NA	NA	rs2294005	0.23	0.23	0.208	0.191094	0.1581	0.5873	0.1527	0.0061	0.0941	0.16	0.59	0.14	0.02	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.772127	2.772127	NA	NA	NA	NA	0.138	NA	3.8419
1268	9	134387326	134387326	G	A	intronic	POMT1	NA	NA	NA	intronic	ENSG00000130714	NA	NA	NA	NA	NA	9q34.13	NA	NA	NA	NA	rs116150532	0.09	0.09	0.073	0.0840655	0.1581	0.001	0.0879	0.1316	0.0266	0.15	0.0017	0.09	0.1	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.281241	NA	NA	NA	NA	NA	0.167	NA	3.8419
1268	11	117391736	117391736	A	G	intronic	DSCAML1	NA	NA	NA	intronic	ENSG00000177103	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs7936795	0.17	0.17	0.128	0.197684	0.1581	0.254	0.1873	0.0923	0.3303	0.16	0.26	0.17	0.07	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.390916	NA	NA	NA	NA	NA	0.094	NA	3.8419
1268	12	125456048	125456048	A	T	intronic	DHX37	NA	NA	NA	intronic	ENSG00000150990	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs73229579	0.08	0.08	0.071	0.091254	0.1581	0.0506	0.0504	0.0038	0.2117	0.16	0.05	0.06	0.01	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.358064	NA	NA	NA	NA	NA	0.029	NA	3.8419
1268	20	34142257	34142257	C	T	intronic	ERGIC3	NA	NA	NA	intronic	ENSG00000125991	NA	NA	NA	NA	NA	20q11.22	NA	NA	NA	NA	rs60267524	0.15	0.15	0.134	0.192492	0.1581	0.1399	0.1657	0.1899	0.3047	0.14	0.13	0.18	0.17	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.562399	NA	NA	NA	NA	NA	0.13	NA	3.8419
1268	20	34142287	34142287	G	A	intronic	ERGIC3	NA	NA	NA	intronic	ENSG00000125991	NA	NA	NA	NA	NA	20q11.22	NA	NA	NA	NA	rs17092784	0.15	0.15	0.123	0.188898	0.1581	0.1399	0.1657	0.1762	0.3047	0.14	0.13	0.18	0.16	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.075628	NA	NA	NA	NA	NA	0.123	NA	3.8419
1268	15	52708502	52708502	T	C	intronic	MYO5A	NA	NA	NA	intronic	ENSG00000197535	NA	NA	NA	NA	NA	15q21.2	NA	NA	NA	NA	rs61363656	0.08	0.08	0.072	0.0722843	0.0497	0.1597	0.0519	0.0303	0.0767	0.05	0.17	0.06	0.02	0.0621	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.355081	NA	NA	0.046337	0.027288	NA	0.087	NA	3.841863
1268	1	109171220	109171220	T	G	intronic	FAM102B	NA	NA	NA	intronic	ENSG00000162636	NA	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	rs77306348	0.03	0.03	0.028	0.0179712	0.0626	NA	0.0317	0.0008	0.0041	0.06	NA	0.04	0.0041	0.038	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.162342	NA	NA	0.057598	0.014561	NA	0.007	NA	3.841802
1268	1	224495852	224495852	C	T	exonic	NVL	NA	synonymous SNV	NVL:NM_206840:exon5:c.G138A:p.R46R,NVL:NM_002533:exon6:c.G456A:p.R152R	exonic	ENSG00000143748	NA	synonymous SNV	ENSG00000143748:ENST00000492281:exon2:c.G171A:p.R57R,ENSG00000143748:ENST00000361463:exon5:c.G138A:p.R46R,ENSG00000143748:ENST00000391875:exon5:c.G138A:p.R46R,ENSG00000143748:ENST00000436927:exon5:c.G144A:p.R48R,ENSG00000143748:ENST00000281701:exon6:c.G456A:p.R152R,ENSG00000143748:ENST00000467882:exon6:c.G456A:p.R152R	NA	NA	1q42.11	NA	Name=MafF_(M8194),MafK_(SC-477),MafK_(ab50322)	NA	NA	rs7534447	0.85	0.85	0.828	0.821685	0.9672	0.8899	0.9337	0.5295	0.9172	0.97	0.9	0.93	0.56	0.9143	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.149059	NA	NA	0.943488	0.600091	NA	0.826	NA	3.8416786
1268	20	9401928	9401928	G	A	intronic	PLCB4	NA	NA	NA	intronic	ENSG00000101333	NA	NA	NA	NA	NA	20p12.2	NA	NA	NA	NA	rs6056608	0.14	0.14	0.12	0.144169	0.0447	0.2391	0.1599	0.1906	0.0746	0.05	0.22	0.15	0.17	0.0734	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.193572	NA	NA	0.040233	0.155697	NA	0.065	NA	3.841667
1268	14	58766617	58766617	A	G	intronic	ARID4A	NA	NA	NA	intronic	ENSG00000032219	NA	NA	NA	NA	NA	14q23.1	Score=808;Name=V$COMP1_01	NA	Name=51	NA	rs1957038	0.65	0.65	0.649	0.674121	0.7376	0.4107	0.6902	0.8086	0.6871	0.71	0.38	0.7	0.8	0.6902	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.371929	NA	NA	0.730581	0.784612	ID=COSN164689;OCCURENCE=1(breast)	0.688	NA	3.841619
1268	13	42189232	42189232	C	G	intronic	VWA8	NA	NA	NA	intronic	ENSG00000102763	NA	NA	NA	Score=284;Name=lod=19	NA	13q14.11	NA	NA	Name=72	NA	rs3862741	0.68	0.68	0.647	0.697684	0.7107	0.7341	0.7594	0.5136	0.8517	0.71	0.72	0.76	0.52	0.7278	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.245534	1.245534	NA	0.719888	0.554033	ID=COSN164475;OCCURENCE=1(breast)	0.638	NA	3.841612
1268	11	9801925	9801925	T	G	ncRNA_UTR3	SBF2	NA	NA	NA	ncRNA_exonic	ENSG00000246273	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs3751000	0.33	0.33	0.292	0.327476	0.2654	0.3294	0.3501	0.3517	0.3405	0.25	0.36	0.38	0.36	0.309	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.970506	NA	NA	0.250699	0.314403	NA	0.362	NA	3.8415676
1268	5	43351682	43351682	A	G	intergenic	HMGCS1,CCL28	dist=38068;dist=29918	NA	NA	intergenic	ENSG00000188850,ENSG00000151882	dist=2864;dist=25065	NA	NA	Score=515;Name=lod=165	NA	5p12	NA	NA	NA	NA	rs11743633	0.36	0.36	0.321	0.336462	0.492	0.126	0.4323	0.2973	0.3783	0.49	0.16	0.47	0.31	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.540349	2.540349	NA	NA	NA	NA	0.42	NA	3.8413334
1268	6	139264930	139264930	T	G	intronic	REPS1	NA	NA	NA	intronic	ENSG00000135597	NA	NA	NA	NA	NA	6q24.1	NA	NA	NA	NA	rs6899737	0.23	0.23	0.233	0.240216	0.159	0.2569	0.1297	0.4455	0.1074	0.16	0.26	0.13	0.38	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.320664	NA	NA	NA	NA	NA	0.217	NA	3.841
1268	10	106737026	106737026	T	C	intronic	SORCS3	NA	NA	NA	intronic	ENSG00000156395	NA	NA	NA	NA	NA	10q25.1	NA	NA	NA	NA	rs61867171	0.17	0.17	0.181	0.172324	0.159	NA	0.1571	0.4236	0.0348	0.15	NA	0.15	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.060629	NA	NA	NA	NA	NA	0.159	NA	3.841
1268	22	20103012	20103012	G	A	intronic	TRMT2A	NA	NA	NA	intronic	ENSG00000099899	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs77201758	0.04	0.04	0.042	0.0503195	0.0537	0.0813	0.0101	0.0045	0.1053	0.06	0.07	0.01	0.0041	0.0544	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.43139	NA	NA	0.051123	0.012084	NA	0.043	NA	3.840777
1268	17	8645010	8645010	G	A	intronic	CCDC42	NA	NA	NA	intronic	ENSG00000161973	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs79895013	0.03	0.03	0.031	0.0259585	0.0586	NA	0.0274	0.003	0.0491	0.06	NA	0.02	0.01	0.0488	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.219352	NA	NA	0.052209	0.012029	NA	0.007	NA	3.840391
1268	16	74706298	74706298	A	T	UTR3	MLKL	NM_001142497:c.*104T>A,NM_152649:c.*104T>A	NA	NA	UTR3	ENSG00000168404	ENST00000306247:c.*104T>A,ENST00000308807:c.*104T>A,ENST00000576529:c.*104T>A	NA	NA	NA	NA	16q23.1	NA	NA	NA	NA	rs4888274	0.63	0.63	0.651	0.647963	0.493	0.7907	0.4222	0.7723	0.6524	0.48	0.78	0.44	0.8	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.294912	NA	NA	NA	NA	NA	0.623	NA	3.8403334
1268	6	97629689	97629689	C	A	ncRNA_intronic	MIR548H3	NA	NA	NA	intronic	ENSG00000146263	NA	NA	NA	NA	NA	6q16.1	NA	NA	NA	NA	rs1206171	0.45	0.45	0.469	0.510184	0.493	0.246	0.4063	0.7209	0.589	0.48	0.22	0.41	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.45167	NA	NA	NA	NA	NA	0.558	NA	3.8403333
1268	1	150471156	150471156	C	T	intronic	TARS2	NA	NA	NA	intronic	ENSG00000143374	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs34542152	0.04	0.04	0.042	0.0405351	0.0457	0.001	0.0331	0.09	0.0143	0.05	0.0017	0.03	0.09	0.0527	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.055581	2.055581	NA	0.061279	0.07921	NA	0.014	NA	3.840321
1268	15	51510702	51510702	T	A	intronic	CYP19A1	NA	NA	NA	ncRNA_intronic	ENSG00000259240	NA	NA	NA	NA	NA	15q21.2	NA	NA	Name=25	NA	rs1143704	0.41	0.41	0.418	0.366214	0.4881	0.5208	0.3415	0.1997	0.3241	0.49	0.53	0.35	0.18	0.4863	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.281631	1.281631	NA	0.518639	0.246241	ID=COSN164937;OCCURENCE=1(breast)	0.333	NA	3.8402943
1268	12	97303693	97303693	A	C	intronic	NEDD1	NA	NA	NA	intronic	ENSG00000139350	NA	NA	NA	NA	NA	12q23.1	NA	NA	NA	NA	rs77544329	NA	NA	NA	0.0499201	0.0795	0.005	0.0663	0.0166	0.0992	NA	NA	NA	NA	0.0799	0.0048	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.190726	NA	NA	0.000465	0.004766	NA	NA	NA	3.840135
1268	7	77261820	77261820	T	G	intronic	PTPN12	NA	NA	NA	intronic	ENSG00000127947	NA	NA	NA	NA	NA	7q11.23	NA	NA	NA	NA	rs12666778	0.36	0.36	0.344	0.375998	0.16	0.6915	0.4438	0.2542	0.3896	0.16	0.68	0.43	0.24	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.090222	NA	NA	NA	NA	NA	0.348	NA	3.84
1268	16	24888454	24888454	C	T	intronic	SLC5A11	NA	NA	NA	intronic	ENSG00000158865	NA	NA	NA	NA	NA	16p12.1	NA	NA	NA	NA	rs274074	0.22	0.22	0.212	0.247604	0.16	0.2192	0.255	0.2958	0.2965	0.15	0.22	0.25	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.196803	NA	NA	NA	NA	NA	0.283	NA	3.84
1268	16	27512760	27512760	T	C	intronic	GTF3C1	NA	NA	NA	intronic	ENSG00000077235	NA	NA	NA	NA	NA	16p12.1	NA	NA	NA	NA	rs232072	0.09	0.09	0.079	0.0688898	0.16	0.001	0.1844	0.0098	0.0429	0.16	NA	0.16	0.01	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.125806	NA	NA	NA	NA	NA	0.036	NA	3.84
1268	19	20243477	20243477	A	T	intergenic	ZNF90,ZNF486	dist=11500;dist=34546	NA	NA	ncRNA_intronic	ENSG00000267220,ENSG00000267383	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs1725944	0.41	0.41	0.434	0.419329	0.16	0.4494	0.2954	0.7859	0.2474	0.18	0.48	0.27	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.93825	NA	NA	NA	NA	NA	0.391	NA	3.84
1268	19	38743371	38743371	C	T	intronic	PPP1R14A	NA	NA	NA	intronic	ENSG00000167641,ENSG00000167642	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs55997240	0.16	0.16	0.125	0.147364	0.16	0.1885	0.2378	0.0552	0.1524	0.16	0.19	0.23	0.08	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.871853	NA	NA	NA	NA	NA	0.167	NA	3.84
1268	20	1517979	1517979	G	A	intronic	SIRPD	NA	NA	NA	ncRNA_intronic	ENSG00000242324	NA	NA	NA	NA	NA	20p13	NA	NA	Name=3	NA	rs2256229	0.28	0.28	0.267	0.271965	0.5258	0.0248	0.2622	0.2103	0.3558	0.52	0.02	0.31	0.18	0.4313	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.961247	NA	NA	0.536395	0.269405	ID=COSN166458;OCCURENCE=1(haematopoietic_and_lymphoid_tissue),1(pancreas),1(large_intestine)	0.304	NA	3.8398383
1268	4	108944732	108944732	G	A	intronic	HADH	NA	NA	NA	intronic	ENSG00000138796	NA	NA	NA	NA	NA	4q25	NA	NA	NA	NA	rs17511214	0.03	0.03	0.028	0.0211661	0.0656	NA	0.0288	0.0015	0.0184	0.07	NA	0.02	0.002	0.0402	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.519336	2.519336	NA	0.054419	0.007263	NA	0.014	NA	3.839781
1268	11	33581262	33581262	G	A	intronic	KIAA1549L	NA	NA	NA	intronic	ENSG00000110427	NA	NA	NA	NA	NA	11p13	Score=881;Name=V$SRF_C	NA	NA	NA	rs2281381	0.39	0.39	0.383	0.383187	0.3887	0.3264	0.317	0.4486	0.3947	0.4	0.33	0.34	0.46	0.3856	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.113763	NA	NA	0.385967	0.446086	NA	0.391	NA	3.839733
1268	14	70714162	70714162	A	G	ncRNA_exonic	ADAM21P1	NA	NA	NA	ncRNA_exonic	ENSG00000235812	NA	NA	NA	NA	NA	14q24.2	NA	NA	NA	NA	rs4899340	0.81	0.81	0.716	0.834465	0.827	0.9038	0.8804	0.6959	0.9254	0.82	0.89	0.87	0.65	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.200059	NA	NA	NA	NA	NA	0.638	NA	3.8396666
1268	6	30076630	30076630	G	T	intronic	TRIM31	NA	NA	NA	ncRNA_intronic	ENSG00000231226	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs2240068	0.54	0.54	0.522	0.566494	0.494	0.6935	0.5836	0.5598	0.5072	0.49	0.66	0.54	0.5	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.046195	NA	NA	NA	NA	NA	0.601	NA	3.8393333
1268	6	97575423	97575423	G	C	ncRNA_intronic	MIR548H3	NA	NA	NA	intronic	ENSG00000186231	NA	NA	NA	NA	NA	6q16.1	NA	NA	NA	NA	rs1612775	0.47	0.47	0.505	0.538938	0.494	0.246	0.4092	0.8434	0.5675	0.48	0.22	0.41	0.81	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.050482	NA	NA	NA	NA	NA	0.594	NA	3.8393333
1268	6	54245270	54245270	A	G	intronic	TINAG	NA	NA	NA	intronic	ENSG00000137251	NA	NA	NA	NA	NA	6p12.1	NA	NA	NA	NA	rs16885273	0.06	0.06	0.055	0.0589058	0.0865	0.004	0.0519	0.0696	0.0777	0.08	0.01	0.07	0.09	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.268158	NA	NA	0.074167	0.071532	NA	0.029	NA	3.839333
1268	11	1213405	1213405	G	A	intergenic	MUC2,MUC5B	dist=108988;dist=30890	NA	NA	intergenic	ENSG00000215182,ENSG00000117983	dist=51044;dist=30891	NA	NA	NA	NA	11p15.5	NA	NA	Name=35	NA	rs67262263	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4941	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.097654	NA	NA	NA	NA	NA	0.007	NA	3.8392334
1268	2	85824073	85824073	T	C	intronic	RNF181	NA	NA	NA	intronic	ENSG00000168894	NA	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs2232747	0.23	0.23	0.235	0.227636	0.0358	0.2966	0.0807	0.5197	0.0634	0.04	0.32	0.08	0.55	0.0979	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.626762	NA	NA	0.027093	0.437131	ID=COSN166156;OCCURENCE=1(breast)	0.261	NA	3.839207
1268	7	43506193	43506193	G	A	intronic	HECW1	NA	NA	NA	intronic	ENSG00000002746	NA	NA	NA	NA	NA	7p13	NA	NA	NA	NA	rs34399842	0.03	0.03	0.014	0.0195687	0.0567	NA	0.0447	0.0008	0.0092	0.06	NA	0.05	NA	0.0483	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.180762	NA	NA	0.055921	0.011158	NA	0.007	NA	3.839079
1268	1	24657860	24657860	A	G	intronic	GRHL3	NA	NA	NA	intronic	ENSG00000158055	NA	NA	NA	NA	NA	1p36.11	NA	NA	NA	NA	rs2486669	0.2	0.2	0.188	0.210264	0.161	0.1925	0.1455	0.3434	0.1452	0.17	0.18	0.16	0.31	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.46576	NA	NA	NA	NA	NA	0.283	NA	3.839
1268	12	48457385	48457385	C	T	intronic	SENP1	NA	NA	NA	intronic	ENSG00000079387	NA	NA	NA	NA	NA	12q13.11	NA	NA	NA	NA	rs3742074	0.34	0.34	0.312	0.346046	0.161	0.5972	0.4568	0.2337	0.3507	0.16	0.57	0.45	0.27	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.176736	NA	NA	NA	NA	NA	0.21	NA	3.839
1268	16	27473860	27473860	G	A	intronic	GTF3C1	NA	NA	NA	intronic	ENSG00000077235	NA	NA	NA	NA	NA	16p12.1	NA	NA	NA	NA	rs12932325	0.09	0.09	0.077	0.0686901	0.161	0.001	0.1844	0.0098	0.0409	0.17	NA	0.16	0.01	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.306277	NA	NA	NA	NA	NA	0.036	NA	3.839
1268	16	27523308	27523308	A	G	intronic	GTF3C1	NA	NA	NA	intronic	ENSG00000077235	NA	NA	NA	NA	NA	16p12.1	NA	NA	NA	NA	rs232079	0.15	0.15	0.142	0.154952	0.161	0.001	0.2089	0.3253	0.0389	0.17	NA	0.19	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.013299	NA	NA	NA	NA	NA	0.145	NA	3.839
1268	15	33922273	33922273	C	T	intronic	RYR3	NA	NA	NA	intronic	ENSG00000198838	NA	NA	NA	NA	NA	15q14	NA	NA	NA	NA	rs11632118	0.05	0.05	0.054	0.048123	0.0507	0.0645	0.0533	0.034	0.044	0.05	0.08	0.05	0.04	0.0646	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.575885	NA	NA	0.045855	0.03515	NA	0.022	NA	3.838845
1268	22	20126702	20126702	C	T	intronic	ZDHHC8	NA	NA	NA	intronic	ENSG00000099904	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs45450699	0.04	0.04	0.039	0.0501198	0.0527	0.0813	0.0101	0.0045	0.1053	0.06	0.07	0.01	0.0041	0.055	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.650565	NA	NA	0.053721	0.011348	NA	0.043	NA	3.838579
1268	16	1394430	1394430	C	T	intronic	BAIAP3	NA	NA	NA	intronic	ENSG00000007516	NA	NA	NA	NA	NA	16p13.3	NA	NA	Name=2	NA	rs12597545	0.3	0.3	0.249	0.289337	0.3956	0.2123	0.5375	0.1324	0.2955	0.4	0.17	0.5	0.15	0.3752	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.131963	NA	NA	0.390698	0.179854	NA	0.225	NA	3.838502
1268	2	105716266	105716266	A	G	UTR3	MRPS9	NM_182640:c.*47A>G	NA	NA	ncRNA_UTR3	ENSG00000135972	NA	NA	NA	NA	NA	2q12.1	NA	NA	NA	NA	rs9066	0.18	0.18	0.15	0.166334	0.2247	0.1091	0.2781	0.1316	0.1329	0.22	0.13	0.25	0.13	0.1967	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.447065	NA	NA	0.240116	0.142306	NA	0.123	NA	3.838484
1268	8	28989789	28989789	T	C	intronic	KIF13B	NA	NA	NA	ncRNA_intronic	ENSG00000254129	NA	NA	NA	NA	NA	8p12	NA	NA	NA	NA	rs9644054	0.17	0.17	0.15	0.164337	0.1501	0.1657	0.3473	0.062	0.1861	0.15	0.2	0.31	0.06	0.1881	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.17891	NA	NA	0.15681	0.071627	ID=COSN168298;OCCURENCE=2(large_intestine)	0.188	NA	3.8383233
1268	5	137622388	137622388	C	G	intronic	CDC25C	NA	NA	NA	intronic	ENSG00000158402	NA	NA	NA	NA	NA	5q31.2	NA	NA	NA	NA	rs10515500	0.1	0.1	0.076	0.0798722	0.162	0.0228	0.1527	0.0166	0.0879	0.16	0.02	0.2	0.02	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.87165	NA	NA	NA	NA	NA	0.13	NA	3.838
1268	1	54272063	54272063	A	T	intronic	TMEM48	NA	NA	NA	intronic	ENSG00000058804	NA	NA	NA	NA	NA	1p32.3	NA	NA	NA	NA	rs1181146	0.11	0.11	0.133	0.130391	0.0497	0.004	0.0749	0.4077	0.0082	0.05	0.01	0.07	0.37	0.0632	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.036445	NA	NA	0.049535	0.325919	NA	0.13	NA	3.837565
1268	8	142955724	142955724	C	G	intergenic	MROH5,MIR4472-1	dist=438394;dist=301976	NA	NA	intergenic	ENSG00000226490,ENSG00000221123	dist=426887;dist=71136	NA	NA	Score=484;Name=lod=124	NA	8q24.3	NA	NA	NA	NA	rs62512203	NA	NA	NA	0.490216	0.496	0.4752	0.4914	0.4962	0.4908	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.479724	NA	NA	NA	NA	NA	NA	NA	3.8373334
1268	2	241808463	241808463	A	G	intronic	AGXT	NA	NA	NA	intronic	ENSG00000172482	NA	NA	NA	NA	NA	2q37.3	NA	NA	NA	NA	rs66494441	0.15	0.15	0.133	NA	NA	NA	NA	NA	NA	0.2	0.08	0.14	0.15	0.1628	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.543465	NA	NA	NA	NA	NA	0.152	NA	3.8372
1268	22	20096395	20096395	A	G	intronic	DGCR8	NA	NA	NA	intronic	ENSG00000128191	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs77725161	0.04	0.04	0.047	0.0507188	0.0547	0.0813	0.0101	0.0053	0.1053	0.06	0.07	0.01	0.0041	0.0541	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.58139	NA	NA	0.05407	0.01271	NA	0.036	NA	3.83713
1268	2	168570458	168570458	T	C	intergenic	XIRP2,B3GALT1	dist=454197;dist=104724	NA	NA	ncRNA_exonic	ENSG00000214211	NA	NA	NA	NA	NA	2q24.3	NA	NA	NA	NA	rs13412132	0.14	0.14	0.139	0.110024	0.163	0.1766	0.0605	0.0492	0.1043	0.15	0.22	0.08	0.07	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.043591	NA	NA	NA	NA	NA	0.21	NA	3.837
1268	6	149813362	149813362	C	A	intergenic	ZC3H12D,PPIL4	dist=7214;dist=12269	NA	NA	ncRNA_exonic	ENSG00000219553	NA	NA	NA	NA	NA	6q25.1	NA	NA	NA	NA	rs4897128	0.33	0.33	0.289	0.330471	0.163	0.7669	0.4452	0.0825	0.3067	0.15	0.75	0.39	0.09	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.36875	NA	NA	NA	NA	NA	0.246	NA	3.837
1268	19	20359950	20359950	T	C	intergenic	ZNF486,MIR1270-1	dist=48651;dist=150131	NA	NA	ncRNA_exonic	ENSG00000268620	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs57015009	0.23	0.23	0.206	0.233427	0.163	0.4613	0.2939	0.0393	0.2904	0.16	0.5	0.24	0.03	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.893983	NA	NA	NA	NA	NA	0.188	NA	3.837
1268	7	150915102	150915102	C	T	intronic	ABCF2	NA	NA	NA	intronic	ENSG00000033050	NA	NA	NA	NA	NA	7q36.1	NA	NA	NA	NA	rs79537035	0.07	0.07	0.061	0.052516	0.163	0.001	0.0937	0.0053	0.0266	0.16	0.0017	0.09	0.01	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.64102	NA	NA	NA	NA	NA	0.152	NA	3.837
1268	10	6552852	6552852	C	T	intronic	PRKCQ	NA	NA	NA	intronic	ENSG00000065675	NA	NA	NA	NA	NA	10p15.1	NA	NA	NA	NA	rs563798	0.08	0.08	0.072	0.0834665	0.163	0.0387	0.1196	0.0076	0.1247	0.15	0.04	0.12	0.01	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.678599	NA	NA	NA	NA	NA	0.065	NA	3.837
1268	10	105901936	105901936	G	A	intronic	WDR96	NA	NA	NA	intronic	ENSG00000197748	NA	NA	NA	NA	NA	10q25.1	NA	NA	NA	NA	rs637022	0.28	0.28	0.315	0.303514	0.163	0.2292	0.1571	0.6445	0.1677	0.15	0.23	0.17	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.633805	NA	NA	NA	NA	NA	0.319	NA	3.837
1268	11	110477212	110477212	C	A	intronic	ARHGAP20	NA	NA	NA	intronic	ENSG00000137727	NA	NA	NA	NA	NA	11q23.1	NA	NA	NA	NA	rs326938	0.18	0.18	0.161	0.177117	0.163	0.1409	0.0908	0.2716	0.1626	0.18	0.12	0.09	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.079188	NA	NA	NA	NA	NA	0.225	NA	3.837
1268	14	20858944	20858944	T	C	intronic	TEP1	NA	NA	NA	intronic	ENSG00000129566	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs4981171	0.03	0.03	0.027	0.0333466	0.0577	NA	0.0274	0.0098	0.0787	0.06	NA	0.03	0.01	0.0498	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.704354	NA	NA	0.055698	0.017249	NA	0.014	NA	3.836802
1268	2	171070850	171070850	G	T	intronic	MYO3B	NA	NA	NA	intronic	ENSG00000071909	NA	NA	NA	NA	NA	2q31.1	NA	Name=YY1_(C-20)	NA	NA	rs13423313	0.4	0.4	0.403	0.40615	0.3777	0.4484	0.3199	0.4244	0.4284	0.38	0.45	0.38	0.37	0.3991	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.323808	NA	NA	0.386545	0.388542	NA	0.268	NA	3.836655
1268	10	133966434	133966434	C	T	intronic	JAKMIP3	NA	NA	NA	intronic	ENSG00000188385	NA	NA	NA	NA	NA	10q26.3	NA	NA	NA	NA	rs11146215	0.17	0.17	0.169	0.150759	0.0288	0.4851	0.0231	0.0938	0.0992	0.04	0.49	0.02	0.11	0.1135	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.826003	NA	NA	0.021105	0.08212	NA	0.109	NA	3.836595
1268	1	186077463	186077463	A	G	ncRNA_intronic	MIR548F1	NA	NA	NA	intronic	ENSG00000143341	NA	NA	NA	NA	NA	1q31.1	NA	NA	NA	NA	rs1555495	0.63	0.63	0.649	0.633187	0.497	0.5744	0.6441	0.8737	0.501	0.51	0.6	0.64	0.85	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.30523	NA	NA	NA	NA	NA	0.696	NA	3.8363333
1268	3	15807692	15807692	A	G	intronic	ANKRD28	NA	NA	NA	intronic	ENSG00000206560	NA	NA	NA	NA	NA	3p25.1	NA	NA	NA	NA	rs73038264	0.04	0.04	0.027	0.0229633	0.0696	NA	0.0418	0.003	0.0123	0.07	NA	0.05	0.01	0.0403	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.741601	1.741601	NA	0.053908	0.008796	NA	0.022	NA	3.836192
1268	19	45731564	45731564	G	A	intronic	EXOC3L2	NA	NA	NA	intronic	ENSG00000007047,ENSG00000130201	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs56187099	0.09	0.09	0.094	0.0926518	0.0447	0.1171	0.036	0.1543	0.0736	0.05	0.13	0.03	0.17	0.07	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.491769	NA	NA	0.049115	0.141136	NA	0.094	NA	3.836185
1268	2	85823632	85823632	C	T	intronic	RNF181	NA	NA	NA	intronic	ENSG00000168894	NA	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs2232745	0.23	0.23	0.249	0.226637	0.0358	0.2927	0.0807	0.5189	0.0634	0.04	0.32	0.08	0.54	0.1011	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.093811	NA	NA	0.026977	0.435542	ID=COSM148887;OCCURENCE=1(stomach)	0.261	NA	3.836123
1268	5	24511368	24511368	C	T	intronic	CDH10	NA	NA	NA	intronic	ENSG00000040731	NA	NA	NA	NA	NA	5p14.2	NA	NA	NA	NA	rs3797168	0.08	0.08	0.083	0.0734824	0.164	0.0268	0.0908	0.0076	0.1053	0.17	0.03	0.09	0.01	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.305133	NA	NA	NA	NA	NA	0.087	NA	3.836
1268	12	32871481	32871481	G	A	intronic	DNM1L	NA	NA	NA	intronic	ENSG00000087470	NA	NA	NA	NA	NA	12p11.21	NA	NA	NA	NA	rs10844314	0.14	0.14	0.142	0.144369	0.164	0.0833	0.1052	0.2156	0.1186	0.16	0.07	0.1	0.23	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.089547	NA	NA	NA	NA	NA	0.101	NA	3.836
1268	12	92924921	92924921	T	C	intergenic	CLLU1,C12orf74	dist=100191;dist=171698	NA	NA	ncRNA_exonic	ENSG00000258262	NA	NA	NA	NA	NA	12q22	NA	NA	NA	NA	rs10859334	0.2	0.2	0.201	0.185703	0.164	0.4018	0.1614	0.0257	0.2188	0.16	0.41	0.17	0.04	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.302994	NA	NA	NA	NA	NA	0.116	NA	3.836
1268	13	26692949	26692949	G	A	intergenic	SHISA2,RNF6	dist=67751;dist=93956	NA	NA	ncRNA_intronic	ENSG00000233963,ENSG00000234706	NA	NA	NA	NA	NA	13q12.13	NA	NA	NA	NA	rs112460253	0.14	0.14	0.091	0.129393	0.164	0.1617	0.2262	0.0068	0.1575	0.16	0.17	0.23	0.01	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.522902	1.522902	NA	NA	NA	NA	0.072	NA	3.836
1268	14	56645265	56645265	C	T	intronic	PELI2	NA	NA	NA	intronic	ENSG00000139946	NA	NA	NA	NA	NA	14q22.3	NA	NA	NA	NA	rs17762499	0.1	0.1	0.095	0.0820687	0.164	NA	0.1095	0.09	0.0521	0.17	NA	0.12	0.09	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.872528	NA	NA	NA	NA	NA	0.029	NA	3.836
1268	14	92622679	92622679	T	A	intronic	CPSF2	NA	NA	NA	intronic	ENSG00000165934	NA	NA	NA	NA	NA	14q32.12	NA	NA	NA	NA	rs45600140	0.23	0.23	0.25	0.24401	0.164	0.3194	0.1052	0.298	0.274	0.17	0.31	0.1	0.32	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.103773	NA	NA	NA	NA	NA	0.246	NA	3.836
1268	14	94933377	94933377	A	T	intronic	SERPINA9	NA	NA	NA	intronic	ENSG00000170054	NA	NA	NA	NA	NA	14q32.13	NA	NA	NA	NA	rs28694507	0.15	0.15	0.152	0.138778	0.164	0.1825	0.1138	0.1195	0.1115	0.17	0.2	0.11	0.12	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.638221	NA	NA	NA	NA	NA	0.101	NA	3.836
1268	17	80622290	80622290	A	G	intronic	RAB40B	NA	NA	NA	intronic	ENSG00000141542	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs2279393	0.2	0.2	0.16	0.209465	0.164	0.2391	0.2277	0.1566	0.2843	0.16	0.24	0.25	0.17	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.183341	NA	NA	NA	NA	NA	0.109	NA	3.836
1268	21	44482936	44482936	C	T	intronic	CBS	NA	NA	NA	intronic	ENSG00000160200	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs1789953	0.13	0.13	0.118	0.148163	0.164	0.125	0.245	0.0741	0.1871	0.15	0.12	0.2	0.06	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.02468	NA	NA	NA	NA	NA	0.159	NA	3.836
1268	3	194158010	194158010	A	T	intronic	ATP13A3	NA	NA	NA	intronic	ENSG00000133657	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs9858373	0.13	0.13	0.151	0.157947	0.0417	0.1558	0.1023	0.289	0.1421	0.04	0.14	0.1	0.3	0.0802	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.057777	NA	NA	0.042392	0.25	NA	0.116	NA	3.835708
1268	22	49103660	49103660	T	C	intronic	FAM19A5	NA	NA	NA	intronic	ENSG00000219438	NA	NA	NA	NA	NA	22q13.32	Score=922;Name=V$MSX1_01	NA	Name=3	NA	rs132234	0.72	0.72	0.725	0.691494	0.7197	0.6696	0.6657	0.7829	0.5798	0.73	0.67	0.7	0.79	0.7062	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.369151	NA	NA	0.738507	0.7843	NA	0.812	NA	3.835593
1268	2	30480196	30480196	C	G	intronic	LBH	NA	NA	NA	intronic	ENSG00000213626	NA	NA	NA	NA	NA	2p23.1	NA	NA	NA	NA	rs6548005	0.21	0.21	0.189	0.174121	0.165	0.1548	0.317	0.2277	0.0297	0.17	0.2	0.27	0.21	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.922885	NA	NA	NA	NA	NA	0.174	NA	3.835
1268	6	76550237	76550237	A	G	intronic	MYO6	NA	NA	NA	intronic	ENSG00000196586	NA	NA	NA	NA	NA	6q14.1	NA	NA	NA	NA	rs12216518	0.11	0.11	0.116	0.102835	0.165	0.0387	0.1023	0.1112	0.0941	0.16	0.04	0.12	0.11	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5623	NA	NA	NA	NA	NA	0.225	NA	3.835
1268	10	71696413	71696413	C	T	intronic	COL13A1	NA	NA	NA	intronic	ENSG00000197467	NA	NA	NA	NA	NA	10q22.1	NA	NA	NA	NA	rs12571041	0.19	0.19	0.167	0.184904	0.165	0.3313	0.2579	0.0053	0.2454	0.17	0.35	0.21	0.01	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.572839	NA	NA	NA	NA	NA	0.094	NA	3.835
1268	10	105194476	105194476	C	T	intronic	PDCD11	NA	NA	NA	intronic	ENSG00000148843	NA	NA	NA	NA	NA	10q24.33	NA	NA	NA	NA	rs4917389	0.08	0.08	0.068	0.0682907	0.165	0.003	0.1196	0.0129	0.0746	0.17	0.0035	0.11	0.02	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.195677	NA	NA	NA	NA	NA	0.058	NA	3.835
1268	12	335434	335434	C	G	intronic	SLC6A13	NA	NA	NA	intronic	ENSG00000010379	NA	NA	NA	NA	NA	12p13.33	NA	NA	NA	NA	rs3782867	0.13	0.13	0.1	0.102835	0.165	0.1438	0.1225	0.0431	0.0634	0.17	0.14	0.14	0.04	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.070608	NA	NA	NA	NA	NA	0.087	NA	3.835
1268	19	8932087	8932087	G	A	intronic	ZNF558	NA	NA	NA	intronic	ENSG00000167785	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs111962098	0.13	0.13	0.107	0.15635	0.165	0.1696	0.1614	0.0703	0.2464	0.15	0.12	0.17	0.07	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.018487	NA	NA	NA	NA	NA	0.087	NA	3.835
1268	19	52012542	52012542	C	T	intergenic	SIGLEC12,SIGLEC6	dist=7499;dist=10242	NA	NA	ncRNA_exonic	ENSG00000269580	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs75470949	0.11	0.11	0.093	0.0864617	0.165	0.002	0.085	0.1286	0.0368	0.16	0.0017	0.1	0.15	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.329674	NA	0.22	NA	NA	NA	0.145	NA	3.835
1268	19	52012549	52012549	T	G	intergenic	SIGLEC12,SIGLEC6	dist=7506;dist=10235	NA	NA	ncRNA_exonic	ENSG00000269580	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs77569980	0.11	0.11	0.091	0.0860623	0.165	NA	0.085	0.1286	0.0368	0.16	NA	0.1	0.15	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.357781	NA	1	NA	NA	NA	0.145	NA	3.835
1268	19	53418693	53418693	C	T	intergenic	ZNF320,ZNF816-ZNF321P	dist=24094;dist=11695	NA	NA	ncRNA_intronic	ENSG00000213793	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs7248528	0.29	0.29	0.215	0.284744	0.165	0.2817	0.428	0.3691	0.1953	0.19	0.3	0.35	0.4	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.390047	NA	NA	NA	NA	NA	0.239	NA	3.835
1269	19	613898	613898	T	C	exonic	HCN2	NA	synonymous SNV	HCN2:NM_001194:exon7:c.T1872C:p.A624A	exonic	ENSG00000099822	NA	synonymous SNV	ENSG00000099822:ENST00000251287:exon7:c.T1872C:p.A624A	NA	NA	19p13.3	NA	NA	NA	NA	rs1054786	0.77	0.77	0.691	0.821685	0.5865	0.8958	0.7349	0.9796	0.8354	0.56	0.89	0.73	0.95	0.6699	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.495579	NA	NA	0.575401	0.916629	NA	NA	NA	3.8348656
1269	16	84486903	84486903	C	T	intronic	ATP2C2	NA	NA	NA	intronic	ENSG00000064270	NA	NA	NA	NA	NA	16q24.1	NA	NA	NA	NA	rs114737121	0.03	0.03	0.024	0.0247604	0.0626	0.0069	0.0331	0.0068	0.0225	0.06	0.0017	0.05	0.01	0.0428	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.171989	NA	NA	0.059757	0.017977	NA	0.014	NA	3.834843
1269	7	149520413	149520413	A	C	intronic	SSPO	NA	NA	NA	ncRNA_intronic	ENSG00000197558	NA	NA	NA	NA	NA	7q36.1	NA	NA	NA	NA	rs59644006	0.24	0.24	0.211	0.246805	0.1541	0.248	0.1758	0.447	0.1207	0.14	0.24	0.17	0.44	0.1855	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.769453	NA	NA	0.158902	0.37506	NA	0.312	NA	3.8348313
1269	8	121483019	121483019	C	G	intronic	MTBP	NA	NA	NA	intronic	ENSG00000172167	NA	NA	NA	NA	NA	8q24.12	NA	NA	NA	NA	rs7832491	0.05	0.05	0.047	0.0551118	0.0577	0.0903	0.0231	0.0053	0.1063	0.06	0.07	0.04	0.01	0.0564	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.181944	NA	NA	0.05107	0.013624	NA	0.072	NA	3.83483
1269	17	19729495	19729495	T	C	exonic	ULK2	NA	synonymous SNV	ULK2:NM_001142610:exon11:c.A792G:p.A264A,ULK2:NM_014683:exon11:c.A792G:p.A264A	exonic	ENSG00000083290	NA	synonymous SNV	ENSG00000083290:ENST00000361658:exon11:c.A792G:p.A264A,ENSG00000083290:ENST00000395544:exon11:c.A792G:p.A264A	Score=574;Name=lod=288	NA	17p11.2	NA	NA	NA	NA	rs157397	0.81	0.81	0.792	0.794129	0.9642	0.5923	0.8948	0.7489	0.817	0.96	0.6	0.9	0.77	0.901	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.925888	NA	NA	0.967171	0.796868	NA	0.101	NA	3.8342956
1269	1	109727832	109727832	A	G	intronic	KIAA1324	NA	NA	NA	intronic	ENSG00000116299	NA	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	rs12239854	0.13	0.13	0.131	0.1252	0.166	0.003	0.1282	0.2421	0.0491	0.15	0.0017	0.13	0.26	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.081021	NA	NA	NA	NA	NA	0.138	NA	3.834
1269	2	231113499	231113499	G	A	intronic	SP140	NA	NA	NA	intronic	ENSG00000079263	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs13426106	0.11	0.11	0.107	0.107228	0.166	0.001	0.1124	0.1089	0.1503	0.18	NA	0.14	0.13	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.067365	NA	NA	NA	NA	NA	0.116	NA	3.834
1269	3	41841873	41841873	C	T	intronic	ULK4	NA	NA	NA	intronic	ENSG00000168038	NA	NA	NA	NA	NA	3p22.1	NA	NA	NA	NA	rs17215883	0.09	0.09	0.088	0.0830671	0.166	0.002	0.0879	0.0613	0.1074	0.18	0.0035	0.08	0.06	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.274579	NA	NA	NA	NA	NA	0.13	NA	3.834
1269	8	133975056	133975056	A	C	intronic	TG	NA	NA	NA	intronic	ENSG00000042832	NA	NA	NA	NA	NA	8q24.22	NA	NA	NA	NA	rs7844210	0.33	0.33	0.311	0.359425	0.166	0.499	0.2795	0.4834	0.3037	0.16	0.48	0.28	0.45	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.370665	NA	NA	NA	NA	NA	0.37	NA	3.834
1269	9	125148632	125148632	A	G	intronic	PTGS1	NA	NA	NA	intronic	ENSG00000095303,ENSG00000269738	NA	NA	NA	NA	NA	9q33.2	NA	NA	NA	NA	rs6478565	0.26	0.26	0.284	0.306709	0.166	0.0665	0.281	0.6944	0.1933	0.16	0.06	0.28	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.610762	NA	NA	NA	NA	NA	0.413	NA	3.834
1269	10	105330947	105330947	T	A	intronic	NEURL	NA	NA	NA	intronic	ENSG00000107954	NA	NA	NA	NA	NA	10q24.33	NA	NA	NA	NA	rs12253987	0.22	0.22	0.208	0.285942	0.166	0.1647	0.3127	0.4357	0.3129	0.15	0.11	0.28	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.384403	NA	NA	NA	NA	NA	0.058	NA	3.834
1269	11	49897846	49897846	C	T	intergenic	LOC440040,OR4C13	dist=65877;dist=76097	NA	NA	ncRNA_exonic	ENSG00000255190	NA	NA	NA	NA	NA	11p11.12	NA	NA	NA	NA	rs7947702	0.23	0.23	0.213	0.222843	0.166	0.1954	0.1398	0.3835	0.1513	0.18	0.22	0.14	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.696578	NA	NA	NA	NA	ID=COSN163932;OCCURENCE=1(NS)	0.246	NA	3.834
1269	16	89616790	89616790	G	A	intronic	SPG7	NA	NA	NA	intronic	ENSG00000197912	NA	NA	NA	NA	NA	16q24.3	NA	NA	NA	NA	rs66845605	0.16	0.16	0.134	0.146366	0.166	0.128	0.1225	0.1619	0.1411	0.17	0.13	0.13	0.18	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.760912	NA	NA	NA	NA	NA	0.116	NA	3.834
1269	17	43008905	43008905	C	A	intronic	KIF18B	NA	NA	NA	intronic	ENSG00000186185	NA	NA	NA	NA	NA	17q21.31	NA	NA	NA	NA	rs7218001	0.12	0.12	0.117	0.120807	0.166	0.0139	0.1369	0.1172	0.1779	0.16	0.02	0.17	0.15	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.254529	NA	NA	NA	NA	NA	0.109	NA	3.834
1269	21	15884955	15884955	A	T	intronic	SAMSN1	NA	NA	NA	intronic	ENSG00000155307	NA	NA	NA	NA	NA	21q11.2	NA	NA	NA	NA	rs3761321	0.22	0.22	0.201	0.230232	0.166	0.2788	0.1182	0.3714	0.135	0.15	0.29	0.11	0.34	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.014337	NA	NA	NA	NA	NA	0.181	NA	3.834
1269	3	47162661	47162661	A	G	exonic	SETD2	NA	synonymous SNV	SETD2:NM_014159:exon3:c.T3465C:p.N1155N	exonic	ENSG00000181555	NA	synonymous SNV	ENSG00000181555:ENST00000409792:exon3:c.T3465C:p.N1155N,ENSG00000181555:ENST00000412450:exon3:c.T3333C:p.N1111N	NA	NA	3p21.31	NA	NA	NA	NA	rs6767907	0.68	0.68	0.66	0.678315	0.6074	0.6577	0.6816	0.7837	0.6278	0.61	0.67	0.71	0.79	0.6343	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.356998	NA	NA	0.591163	0.749433	NA	0.71	NA	3.8338036
1269	11	1213533	1213533	C	T	intergenic	MUC2,MUC5B	dist=109116;dist=30762	NA	NA	intergenic	ENSG00000215182,ENSG00000117983	dist=51172;dist=30763	NA	NA	NA	NA	11p15.5	NA	NA	Name=35	NA	rs73395699	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4996	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.701543	NA	NA	NA	NA	NA	0.123	NA	3.8337334
1269	1	1647753	1647753	C	T	intronic	CDK11A,CDK11B	NA	NA	NA	ncRNA_intronic	ENSG00000268575	NA	NA	NA	NA	NA	1p36.33	NA	NA	NA	NA	rs74045984	NA	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4997	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.648222	NA	NA	NA	NA	NA	NA	NA	3.8336333
1269	18	10540299	10540299	A	G	intronic	NAPG	NA	NA	NA	intronic	ENSG00000134265	NA	NA	NA	NA	NA	18p11.22	NA	NA	NA	NA	rs17546495	0.02	0.02	0.015	0.0169728	0.0586	NA	0.0202	0.003	0.0082	0.06	NA	0.02	0.002	0.0454	0.063	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.233518	1.233518	NA	0.062561	0.010434	NA	NA	NA	3.833439
1269	1	144952078	144952078	C	A	UTR3	PDE4DIP	NM_001195261:c.*119G>T,NM_001195260:c.*119G>T,NM_001002810:c.*119G>T,NM_022359:c.*119G>T	NA	NA	UTR3	ENSG00000178104	ENST00000369347:c.*119G>T,ENST00000369348:c.*119G>T	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs2590121	NA	NA	0.371	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4999	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.171815	NA	NA	NA	NA	NA	NA	NA	3.8334334
1269	17	21217586	21217586	G	T	UTR3	MAP2K3	NM_145109:c.*44G>T,NM_002756:c.*44G>T	NA	NA	UTR3	ENSG00000034152	ENST00000342679:c.*44G>T,ENST00000395491:c.*1072G>T,ENST00000496046:c.*514G>T,ENST00000361818:c.*44G>T,ENST00000316920:c.*44G>T	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs2363374	0.5	0.5	0.43	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.4999	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.885002	NA	NA	NA	NA	NA	0.145	NA	3.8334334
1269	1	144874950	144874950	G	A	intronic	NBPF9,PDE4DIP	NA	NA	NA	ncRNA_exonic	ENSG00000254913	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs1747957	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.4999	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.003062	NA	NA	NA	NA	NA	0.5	NA	3.8334333
1269	17	21217547	21217547	T	C	UTR3	MAP2K3	NM_145109:c.*5T>C,NM_002756:c.*5T>C	NA	NA	UTR3	ENSG00000034152	ENST00000342679:c.*5T>C,ENST00000395491:c.*1033T>C,ENST00000496046:c.*475T>C,ENST00000361818:c.*5T>C,ENST00000316920:c.*5T>C	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs2363197	0.5	0.5	0.41	0.000199681	NA	NA	0.0014	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.013952	NA	NA	NA	NA	NA	0.29	NA	3.8333334
1269	17	21217554	21217554	C	T	UTR3	MAP2K3	NM_145109:c.*12C>T,NM_002756:c.*12C>T	NA	NA	UTR3	ENSG00000034152	ENST00000342679:c.*12C>T,ENST00000395491:c.*1040C>T,ENST00000496046:c.*482C>T,ENST00000361818:c.*12C>T,ENST00000316920:c.*12C>T	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs2363196	0.5	0.5	0.42	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.775136	NA	NA	NA	NA	NA	0.29	NA	3.8333334
1269	21	11110302	11110302	T	C	intergenic	BAGE,NONE	dist=11365;dist=NONE	NA	NA	intergenic	ENSG00000187172,ENSG00000231962	dist=11322;dist=43535	NA	NA	NA	NA	21p11.1	NA	NA	Name=32	NA	rs8133925	NA	NA	NA	0.500998	0.5	0.496	0.5029	0.5053	0.5	NA	NA	NA	NA	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.321166	NA	NA	NA	NA	NA	0.478	NA	3.8333334
1269	1	121116647	121116647	T	A	intronic	SRGAP2D	NA	NA	NA	ncRNA_intronic	ENSG00000171943,ENSG00000230806	NA	NA	NA	NA	NA	1p11.2	NA	NA	NA	NA	rs2772072	NA	NA	0.144	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.981811	NA	NA	NA	NA	NA	0.014	NA	3.8333333
1269	11	192997	192997	G	A	upstream	LOC653486,SCGB1C1	NA	NA	NA	intronic	ENSG00000177951	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs2280540	0.24	0.24	0.19	NA	NA	NA	NA	NA	NA	0.16	0.38	0.23	0.19	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.246128	NA	NA	NA	NA	NA	0.13	NA	3.8333333
1269	11	113802600	113802600	C	T	intronic	HTR3B	NA	NA	NA	intronic	ENSG00000149305	NA	NA	NA	NA	NA	11q23.2	NA	NA	NA	NA	rs45597437	0.05	0.05	0.044	0.0529153	0.0567	NA	0.0634	0.1097	0.0194	0.04	NA	0.08	0.09	0.0514	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.384743	NA	NA	0.058659	0.088823	NA	NA	NA	3.833241
1269	11	1213428	1213428	T	C	intergenic	MUC2,MUC5B	dist=109011;dist=30867	NA	NA	intergenic	ENSG00000215182,ENSG00000117983	dist=51067;dist=30868	NA	NA	NA	NA	11p15.5	NA	NA	Name=35	NA	rs61867532	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.705858	NA	NA	NA	NA	NA	NA	NA	3.8332334
1269	15	42201872	42201872	T	C	intronic	EHD4	NA	NA	NA	intronic	ENSG00000103966	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs76085783	0.03	0.03	0.023	0.0351438	0.0517	0.0129	0.0634	0.0015	0.0665	0.06	0.02	0.06	0.002	0.0577	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.067441	NA	NA	0.057572	0.012029	NA	0.029	NA	3.833028
1269	8	77690380	77690380	C	G	intronic	ZFHX4	NA	NA	NA	intronic	ENSG00000091656	NA	NA	NA	NA	NA	8q21.11	NA	NA	NA	NA	rs12679822	0.33	0.33	0.349	0.32508	0.167	0.3899	0.2104	0.5681	0.1738	0.17	0.43	0.23	0.56	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.192652	NA	NA	NA	NA	NA	0.29	NA	3.833
1269	11	49860044	49860044	A	G	intergenic	LOC440040,OR4C13	dist=28075;dist=113899	NA	NA	ncRNA_intronic	ENSG00000219061	NA	NA	NA	NA	NA	11p11.12	NA	NA	NA	NA	rs10839398	0.22	0.22	0.228	0.213059	0.167	0.1954	0.1383	0.3449	0.1534	0.18	0.22	0.13	0.37	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.634458	NA	NA	NA	NA	NA	0.239	NA	3.833
1269	11	49860762	49860762	G	A	intergenic	LOC440040,OR4C13	dist=28793;dist=113181	NA	NA	ncRNA_exonic	ENSG00000219061	NA	NA	NA	NA	NA	11p11.12	NA	NA	NA	NA	rs11040588	0.23	0.23	0.21	0.222843	0.167	0.1954	0.1398	0.382	0.1524	0.18	0.22	0.14	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.351306	NA	NA	NA	NA	NA	0.246	NA	3.833
1269	11	50129598	50129598	G	A	intergenic	OR4C12,LOC441601	dist=125527;dist=109401	NA	NA	ncRNA_exonic	ENSG00000255442	NA	NA	NA	NA	NA	11p11.12	NA	NA	NA	NA	rs7104653	0.21	0.21	0.217	0.206869	0.167	0.131	0.1412	0.3722	0.1493	0.18	0.14	0.13	0.4	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.180541	NA	NA	NA	NA	NA	0.217	NA	3.833
1269	12	55916780	55916780	A	G	intergenic	OR6C68,OR6C4	dist=29680;dist=28231	NA	NA	ncRNA_exonic	ENSG00000234670	NA	NA	NA	NA	NA	12q13.2	NA	NA	NA	NA	rs12230513	0.21	0.21	0.188	0.20028	0.167	0.4444	0.2205	0.0794	0.1319	0.17	0.39	0.16	0.09	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.122914	2.122914	NA	NA	NA	NA	0.087	NA	3.833
1269	19	20262530	20262530	A	G	intergenic	ZNF90,ZNF486	dist=30553;dist=15493	NA	NA	ncRNA_intronic	ENSG00000267220,ENSG00000267383	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs1620631	0.39	0.39	0.411	0.403754	0.167	0.4484	0.2839	0.7398	0.2321	0.18	0.48	0.25	0.73	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.206442	NA	NA	NA	NA	NA	0.362	NA	3.833
1269	19	20262585	20262585	C	T	intergenic	ZNF90,ZNF486	dist=30608;dist=15438	NA	NA	ncRNA_intronic	ENSG00000267220,ENSG00000267383	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs1654305	0.35	0.35	0.357	0.355032	0.167	0.4484	0.2637	0.5658	0.2321	0.18	0.48	0.23	0.57	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.535095	NA	NA	NA	NA	NA	0.312	NA	3.833
1269	19	53418706	53418706	C	T	intergenic	ZNF320,ZNF816-ZNF321P	dist=24107;dist=11682	NA	NA	ncRNA_intronic	ENSG00000213793	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs7248531	0.29	0.29	0.234	0.289537	0.167	0.2827	0.4323	0.3835	0.1943	0.19	0.3	0.35	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.641356	NA	NA	NA	NA	NA	0.232	NA	3.833
1269	4	76996981	76996981	C	T	intronic	ART3	NA	NA	NA	intronic	ENSG00000156219	NA	NA	NA	NA	NA	4q21.1	NA	NA	NA	NA	rs7693117	0.11	0.11	0.103	0.117812	0.0845	0.0516	0.183	0.2012	0.0613	0.08	0.06	0.17	0.19	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.691321	NA	NA	0.082652	0.193642	NA	0.167	NA	3.832848
1269	11	7847472	7847472	C	T	exonic	OR5P3	NA	synonymous SNV	OR5P3:NM_153445:exon1:c.G48A:p.G16G	exonic	ENSG00000182334	NA	synonymous SNV	ENSG00000182334:ENST00000328375:exon1:c.G48A:p.G16G	NA	NA	11p15.4	NA	NA	NA	NA	rs1482793	0.47	0.47	0.411	0.44389	0.6292	0.4762	0.5937	0.0726	0.6155	0.64	0.49	0.59	0.1	0.5884	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.027528	NA	NA	0.616293	0.166667	NA	0.471	NA	3.8327736
1269	1	1647778	1647778	C	G	intronic	CDK11A,CDK11B	NA	NA	NA	ncRNA_intronic	ENSG00000268575	NA	NA	NA	NA	NA	1p36.33	NA	NA	NA	NA	rs72901773	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5007	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.678137	NA	NA	NA	NA	NA	0.029	NA	3.8326333
1269	17	21217566	21217566	C	T	UTR3	MAP2K3	NM_145109:c.*24C>T,NM_002756:c.*24C>T	NA	NA	UTR3	ENSG00000034152	ENST00000342679:c.*24C>T,ENST00000395491:c.*1052C>T,ENST00000496046:c.*494C>T,ENST00000361818:c.*24C>T,ENST00000316920:c.*24C>T	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs2363375	0.5	0.5	0.41	0.000599042	0.001	NA	NA	NA	0.002	0.5	0.5	0.5	0.5	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.89017	1.89017	NA	NA	NA	NA	0.29	NA	3.8323334
1269	19	19638218	19638218	G	A	intronic	NDUFA13	NA	NA	NA	UTR3	ENSG00000186010	ENST00000511180:c.*53G>A	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs75525243	0.12	0.12	0.125	0.11901	0.171	NA	0.1167	0.1626	0.1309	0.15	NA	0.14	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.083477	NA	NA	0.163419	0.153179	NA	0.109	NA	3.8322477
1269	1	244747294	244747294	G	A	intronic	C1orf101	NA	NA	NA	intronic	ENSG00000179397	NA	NA	NA	NA	NA	1q44	NA	NA	NA	NA	rs6429489	0.21	0.21	0.226	0.271965	0.0875	0.372	0.245	0.4206	0.1769	0.06	0.31	0.2	0.32	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.220074	NA	NA	0.080453	0.308526	NA	0.014	NA	3.832047
1269	16	720071	720071	G	A	intronic	RHOT2	NA	NA	NA	intronic	ENSG00000140983	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs62032482	0.17	0.17	0.149	0.184704	0.0805	0.2937	0.0562	0.2912	0.1268	0.07	0.29	0.05	0.28	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.206078	NA	NA	0.087462	0.237315	NA	0.13	NA	3.832038
1269	3	119721171	119721171	T	C	intronic	GSK3B	NA	NA	NA	intronic	ENSG00000082701	NA	NA	NA	NA	NA	3q13.33	NA	NA	NA	NA	rs12108149	0.29	0.29	0.29	0.307109	0.168	0.4702	0.1729	0.3661	0.2975	0.17	0.48	0.18	0.33	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.144529	NA	NA	NA	NA	NA	0.225	NA	3.832
1269	10	6063319	6063319	C	T	intronic	IL2RA	NA	NA	NA	intronic	ENSG00000134460	NA	NA	NA	NA	NA	10p15.1	NA	NA	NA	NA	rs7093069	0.17	0.17	0.174	0.167931	0.168	0.1438	0.0965	0.2262	0.1646	0.17	0.15	0.11	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.109255	NA	NA	NA	NA	NA	0.225	NA	3.832
1269	22	46795523	46795523	T	C	intronic	CELSR1	NA	NA	NA	intronic	ENSG00000075275	NA	NA	NA	NA	NA	22q13.31	NA	NA	NA	NA	rs7290972	0.26	0.26	0.298	0.277556	0.168	0.0119	0.1455	0.7572	0.1094	0.17	0.01	0.16	0.77	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.057965	NA	NA	NA	NA	NA	0.261	NA	3.832
1269	6	151766397	151766397	G	A	intronic	RMND1	NA	NA	NA	intronic	ENSG00000155906	NA	NA	NA	NA	NA	6q25.1	NA	NA	NA	NA	rs73783025	0.1	0.1	0.097	0.11262	0.0487	0.1538	0.0447	0.1838	0.0879	0.05	0.14	0.04	0.17	0.0689	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.443788	NA	NA	0.05042	0.134659	NA	0.087	NA	3.83198
1269	16	56686380	56686380	T	C	intronic	MT1B	NA	NA	NA	ncRNA_intronic	ENSG00000259923	NA	NA	NA	NA	NA	16q12.2	NA	NA	NA	NA	rs2013775	0.38	0.38	0.355	0.38778	0.502	0.3185	0.402	0.2587	0.5061	0.51	0.3	0.43	0.24	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.665691	2.665691	NA	NA	NA	NA	0.384	NA	3.8313333
1269	1	154407419	154407419	A	C	intronic	IL6R	NA	NA	NA	intronic	ENSG00000160712	NA	NA	NA	NA	NA	1q21.3	NA	NA	Name=12	NA	rs7518199	0.35	0.35	0.323	0.327476	0.3678	0.3323	0.549	0.1944	0.3037	0.36	0.37	0.49	0.2	0.3899	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.271378	NA	NA	0.411005	0.22533	NA	0.37	NA	3.831295
1269	16	58577421	58577421	C	T	exonic	CNOT1	NA	synonymous SNV	CNOT1:NM_206999:exon31:c.G4524A:p.A1508A	exonic	ENSG00000125107	NA	synonymous SNV	ENSG00000125107:ENST00000441024:exon31:c.G4524A:p.A1508A	NA	NA	16q21	NA	NA	NA	NA	rs41260	0.78	0.78	0.806	0.80631	0.5726	0.9712	0.7392	0.9062	0.7894	0.59	0.98	0.71	0.9	0.7121	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.168506	NA	NA	0.550888	0.848855	NA	0.754	NA	3.8310786
1269	1	146397300	146397300	G	A	intronic	NBPF10	NA	NA	NA	intronic	ENSG00000186275	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs7364664	NA	NA	NA	0.164137	0.169	0.1885	0.3314	0.056	0.1616	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.582911	NA	NA	NA	NA	NA	NA	NA	3.831
1269	1	181708168	181708168	A	G	intronic	CACNA1E	NA	NA	NA	intronic	ENSG00000198216	NA	NA	NA	NA	NA	1q25.3	NA	NA	NA	NA	rs73045109	0.17	0.17	0.186	0.198482	0.169	0.0506	0.1542	0.3041	0.2699	0.17	0.04	0.16	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.00095	NA	NA	NA	NA	NA	0.138	NA	3.831
1269	4	39456635	39456635	T	C	intronic	RPL9	NA	NA	NA	intronic	ENSG00000163682	NA	NA	NA	NA	NA	4p14	NA	NA	NA	NA	rs10025155	0.19	0.19	0.2	0.202077	0.169	0.1518	0.1787	0.329	0.1329	0.16	0.14	0.15	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.122985	NA	NA	NA	NA	NA	0.232	NA	3.831
1269	9	119582761	119582761	A	G	intronic	ASTN2	NA	NA	NA	intronic	ENSG00000148219	NA	NA	NA	NA	NA	9q33.1	NA	NA	NA	NA	rs3765536	0.26	0.26	0.238	0.265375	0.169	0.4851	0.2464	0.1997	0.2403	0.17	0.47	0.22	0.19	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.264379	NA	NA	NA	NA	NA	0.188	NA	3.831
1269	14	69392445	69392445	G	A	intronic	ACTN1	NA	NA	NA	intronic	ENSG00000072110	NA	NA	NA	NA	NA	14q24.1	NA	NA	NA	NA	rs3742897	0.17	0.17	0.136	0.166733	0.169	0.2302	0.2738	0.0378	0.1973	0.17	0.21	0.25	0.05	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.141969	NA	NA	NA	NA	NA	0.167	NA	3.831
1269	16	84449032	84449032	G	T	intronic	ATP2C2	NA	NA	NA	intronic	ENSG00000064270	NA	NA	NA	NA	NA	16q24.1	NA	NA	NA	NA	rs3743650	0.14	0.14	0.122	0.153355	0.169	0.0248	0.2075	0.1467	0.2403	0.17	0.03	0.22	0.17	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.112805	NA	NA	NA	NA	NA	0.225	NA	3.831
1269	22	30188611	30188611	T	C	intronic	ASCC2	NA	NA	NA	intronic	ENSG00000100325	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs9614057	0.08	0.08	0.076	0.0509185	0.169	NA	0.0865	0.0053	0.0184	0.17	NA	0.11	0.01	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.22501	NA	NA	NA	NA	NA	0.029	NA	3.831
1269	7	123508309	123508309	G	A	UTR5	HYAL4	NM_012269:c.-19G>A	NA	NA	UTR5	ENSG00000106302	ENST00000489978:c.-19G>A,ENST00000488323:c.-19G>A,ENST00000223026:c.-19G>A,ENST00000476325:c.-19G>A,ENST00000483878:c.-19G>A	NA	NA	NA	NA	7q31.32	NA	NA	NA	NA	rs1034955	0.13	0.13	0.126	0.124201	0.1789	0.002	0.0994	0.171	0.1483	0.18	0.0035	0.1	0.23	0.1529	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.113421	NA	NA	0.170621	0.18733	NA	0.101	NA	3.8309124
1269	15	78834476	78834476	A	G	intronic	PSMA4	NA	NA	NA	intronic	ENSG00000041357	NA	NA	NA	NA	NA	15q25.1	NA	NA	NA	NA	rs41280046	0.03	0.03	0.032	0.023762	0.0716	NA	0.0418	0.0015	0.0164	0.07	NA	0.04	NA	0.0399	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.821193	NA	NA	0.057652	0.014117	NA	0.022	NA	3.830848
1269	10	7866269	7866269	A	G	intronic	TAF3	NA	NA	NA	intronic	ENSG00000165632	NA	NA	NA	NA	NA	10p14	NA	NA	NA	NA	rs114054696	0.12	0.12	NA	0.184105	0.169	0.0675	0.1124	0.2141	0.3303	0.14	0.06	0.11	0.18	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.620536	NA	NA	0.000367	0.000549	NA	NA	NA	3.830633
1269	16	5106184	5106184	C	T	exonic	C16orf89	NA	synonymous SNV	C16orf89:NM_001098514:exon5:c.G633A:p.G211G,C16orf89:NM_152459:exon5:c.G633A:p.G211G	exonic	ENSG00000153446	NA	synonymous SNV	ENSG00000153446:ENST00000315997:exon5:c.G633A:p.G211G,ENSG00000153446:ENST00000350219:exon5:c.G747A:p.G249G,ENSG00000153446:ENST00000422873:exon5:c.G747A:p.G249G,ENSG00000153446:ENST00000472572:exon5:c.G633A:p.G211G,ENSG00000153446:ENST00000474471:exon5:c.G633A:p.G211G	NA	NA	16p13.3	NA	NA	NA	NA	rs741164	0.56	0.56	0.544	0.522963	0.6292	0.5665	0.6398	0.3971	0.456	0.64	0.58	0.61	0.4	0.5848	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.11186	NA	NA	0.622183	0.461251	NA	0.63	NA	3.8304836
1269	3	145809750	145809750	T	C	intronic	PLOD2	NA	NA	NA	ncRNA_intronic	ENSG00000243415	NA	NA	NA	NA	NA	3q24	NA	NA	NA	NA	rs3792341	0.52	0.52	0.519	0.511182	0.503	0.5754	0.4769	0.5356	0.4448	0.5	0.56	0.49	0.53	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.065898	NA	NA	NA	NA	NA	0.478	NA	3.8303333
1269	2	84800605	84800605	C	A	exonic	DNAH6	NA	synonymous SNV	DNAH6:NM_001370:exon12:c.C1818A:p.A606A	exonic	ENSG00000115423	NA	synonymous SNV	ENSG00000115423:ENST00000237449:exon11:c.C1818A:p.A606A,ENSG00000115423:ENST00000389394:exon12:c.C1818A:p.A606A,ENSG00000115423:ENST00000398278:exon12:c.C1818A:p.A606A	Score=441;Name=lod=83	NA	2p11.2	NA	NA	NA	NA	rs11891970	0.94	0.94	0.943	0.929712	0.9453	0.997	0.9625	0.8313	0.954	0.96	1	0.96	0.85	0.9465	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.847264	NA	NA	0.944535	0.839083	NA	0.92	NA	3.8303316
1269	15	81660718	81660718	A	G	intronic	TMC3	NA	NA	NA	intronic	ENSG00000188869	NA	NA	NA	NA	NA	15q25.1	NA	NA	NA	NA	rs7162538	0.08	0.08	0.081	0.0750799	0.0467	0.0694	0.0447	0.1233	0.0665	0.04	0.08	0.05	0.14	0.0628	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.161946	NA	NA	0.060169	0.095952	NA	0.08	NA	3.830331
1269	1	881627	881627	G	A	exonic	NOC2L	NA	synonymous SNV	NOC2L:NM_015658:exon16:c.C1843T:p.L615L	exonic	ENSG00000188976	NA	synonymous SNV	ENSG00000188976:ENST00000327044:exon16:c.C1843T:p.L615L	NA	NA	1p36.33	NA	NA	NA	NA	rs2272757	0.47	0.47	0.441	0.441893	0.6332	0.624	0.438	0.0643	0.5706	0.63	0.61	0.46	0.08	0.5653	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.95413	NA	NA	0.637907	0.156222	ID=COSM1344685;OCCURENCE=1(large_intestine)	0.478	NA	3.8302596
1269	2	158140717	158140717	C	T	intronic	GALNT5	NA	NA	NA	intronic	ENSG00000136542	NA	NA	NA	NA	NA	2q24.1	NA	NA	NA	NA	rs2289942	0.29	0.29	0.291	0.279952	0.17	0.4752	0.2392	0.3245	0.1605	0.18	0.46	0.2	0.31	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.068431	NA	NA	NA	NA	NA	0.297	NA	3.83
1269	3	124538764	124538764	C	A	intronic	ITGB5	NA	NA	NA	intronic	ENSG00000082781	NA	NA	NA	NA	NA	3q21.2	NA	NA	NA	NA	rs12490538	0.18	0.18	0.165	0.174521	0.17	0.1815	0.2651	0.1241	0.1759	0.16	0.19	0.26	0.12	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.873595	1.873595	NA	NA	NA	NA	0.116	NA	3.83
1269	5	78265092	78265092	C	T	intronic	ARSB	NA	NA	NA	intronic	ENSG00000113273	NA	NA	NA	NA	NA	5q14.1	NA	NA	NA	NA	rs918581	0.13	0.13	0.125	0.152955	0.17	0.0823	0.147	0.1528	0.2127	0.18	0.05	0.14	0.15	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.679328	NA	NA	NA	NA	NA	0.13	NA	3.83
1269	6	33232025	33232025	C	T	intronic	VPS52	NA	NA	NA	intronic	ENSG00000223501	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs460568	0.18	0.18	0.182	0.214856	0.17	0.1339	0.1715	0.3207	0.2321	0.16	0.13	0.16	0.28	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.809481	NA	NA	NA	NA	NA	0.188	NA	3.83
1269	11	63962152	63962152	T	C	intronic	STIP1	NA	NA	NA	intronic	ENSG00000168439	NA	NA	NA	NA	NA	11q13.1	NA	NA	NA	NA	rs2282490	0.17	0.17	0.148	0.152157	0.17	0.1736	0.3228	0.0908	0.0736	0.17	0.17	0.29	0.08	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.375575	NA	NA	NA	NA	NA	0.116	NA	3.83
1269	11	63962162	63962162	G	A	intronic	STIP1	NA	NA	NA	intronic	ENSG00000168439	NA	NA	NA	NA	NA	11q13.1	NA	NA	NA	NA	rs67546972	0.17	0.17	0.149	0.152556	0.17	0.1736	0.3242	0.0915	0.0736	0.17	0.17	0.29	0.08	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.196273	NA	NA	NA	NA	NA	0.116	NA	3.83
1269	15	31087604	31087604	A	G	intergenic	LOC100288637,HERC2P10	dist=22395;dist=22635	NA	NA	ncRNA_intronic	ENSG00000103832	NA	NA	NA	NA	NA	15q13.2	NA	NA	NA	NA	rs71399732	0.12	0.12	0.097	0.144369	0.17	0.0198	0.1009	0.2216	0.1728	0.16	0.02	0.11	0.2	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.659628	NA	NA	NA	NA	NA	0.072	NA	3.83
1269	7	156468377	156468377	G	C	intronic	RNF32	NA	NA	NA	ncRNA_intronic	ENSG00000225666	NA	NA	NA	NA	NA	7q36.3	NA	NA	NA	NA	rs2886380	0.45	0.45	0.283	NA	NA	NA	NA	NA	NA	0.32	0.51	0.35	0.68	0.3853	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.21647	NA	NA	0.118256	0.560599	NA	0.116	NA	3.8297773
1269	9	5467801	5467801	C	T	intronic	CD274	NA	NA	NA	intronic	ENSG00000120217	NA	NA	NA	NA	NA	9p24.1	NA	NA	NA	NA	rs41303227	0.02	0.02	0.019	0.0289537	0.0596	NA	0.0159	0.0121	0.0593	0.06	NA	0.02	0.0041	0.0512	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.294125	NA	NA	0.059535	0.018838	NA	0.036	NA	3.829665
1269	12	108104317	108104317	C	G	intronic	PWP1	NA	NA	NA	intronic	ENSG00000136045	NA	NA	NA	NA	NA	12q23.3	NA	NA	NA	NA	rs74977517	0.03	0.03	0.018	0.0223642	0.0636	NA	0.0375	0.0023	0.0194	0.07	NA	0.04	0.01	0.0454	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.101993	NA	NA	0.061395	0.011802	NA	0.036	NA	3.829605
1269	10	71648002	71648002	C	T	intronic	COL13A1	NA	NA	NA	intronic	ENSG00000197467	NA	NA	NA	NA	NA	10q22.1	NA	NA	NA	NA	rs41277956	0.05	0.05	0.05	0.0457268	0.0865	0.0615	0.0331	0.0091	0.046	0.09	0.06	0.03	0.02	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.519486	1.519486	NA	0.083909	0.010838	NA	0.029	NA	3.829591
1269	20	50305595	50305595	C	T	intronic	ATP9A	NA	NA	NA	intronic	ENSG00000054793	NA	NA	NA	NA	NA	20q13.2	NA	NA	NA	NA	rs6512744	0.08	0.08	0.101	0.0834665	0.0606	NA	0.0331	0.2247	0.0378	0.07	NA	0.04	0.24	0.0556	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.452094	NA	NA	0.054302	0.199728	NA	0.094	NA	3.829498
1269	19	12939792	12939792	T	C	intronic	RTBDN	NA	NA	NA	exonic	ENSG00000132026	NA	nonsynonymous SNV	ENSG00000132026:ENST00000585384:exon3:c.A220G:p.S74G,ENSG00000132026:ENST00000587549:exon4:c.A316G:p.S106G	NA	NA	19p13.2	NA	NA	NA	NA	rs1466306	0.72	0.72	0.741	NA	NA	NA	NA	NA	NA	0.6	0.78	0.72	0.85	0.7018	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.222433	NA	NA	0.635465	0.840899	NA	0.768	NA	3.8294017
1269	1	3424508	3424508	G	A	intronic	MEGF6	NA	NA	NA	intronic	ENSG00000162591	NA	NA	NA	NA	NA	1p36.32	NA	NA	NA	NA	rs41315296	0.05	0.05	0.054	0.0593051	0.0507	0.1032	0.0504	0.0076	0.0992	0.05	0.09	0.06	0.01	0.0608	0.098	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.994447	NA	NA	0.059398	0.011776	NA	0.065	NA	3.829102
1269	1	147314153	147314153	A	G	intergenic	GJA5,GJA8	dist=68669;dist=60793	NA	NA	ncRNA_exonic	ENSG00000223728	NA	NA	NA	NA	NA	1q21.2	NA	NA	NA	NA	rs10900400	0.18	0.18	0.154	0.155152	0.171	0.248	0.2089	0.115	0.0593	0.17	0.24	0.21	0.09	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.25384	NA	NA	NA	NA	NA	0.188	NA	3.829
1269	5	82264820	82264820	G	A	intergenic	MIR3977,TMEM167A	dist=128777;dist=83845	NA	NA	ncRNA_exonic	ENSG00000248400	NA	NA	NA	NA	NA	5q14.2	NA	NA	NA	NA	rs154231	0.37	0.37	0.341	0.341254	0.171	0.5774	0.3415	0.4327	0.1493	0.16	0.57	0.39	0.43	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.363132	NA	NA	NA	NA	NA	0.246	NA	3.829
1269	18	11644364	11644364	G	A	intergenic	PIEZO2,GNAL	dist=495603;dist=44650	NA	NA	ncRNA_exonic	ENSG00000267773	NA	NA	NA	NA	NA	18p11.21	NA	NA	NA	NA	rs111474526	0.12	0.12	0.082	0.109625	0.171	0.0853	0.1182	0.0772	0.1094	0.17	0.09	0.14	0.07	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.354369	NA	NA	NA	NA	NA	0.101	NA	3.829
1269	1	109839896	109839896	C	T	intronic	MYBPHL	NA	NA	NA	intronic	ENSG00000221986	NA	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	rs7515901	0.22	0.22	0.227	0.235024	0.171	0.124	0.1037	0.4705	0.1902	0.18	0.1	0.12	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.620966	NA	NA	NA	NA	NA	0.203	NA	3.829
1269	2	120776988	120776988	A	G	intronic	EPB41L5	NA	NA	NA	intronic	ENSG00000115109	NA	NA	NA	NA	NA	2q14.2	NA	NA	NA	NA	rs17669093	0.1	0.1	0.094	0.0808706	0.171	0.0387	0.0908	0.0113	0.1186	0.18	0.05	0.12	0.02	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.095817	NA	NA	NA	NA	NA	0.072	NA	3.829
1269	5	176320106	176320106	G	C	intronic	HK3	NA	NA	NA	intronic	ENSG00000160883	NA	NA	NA	NA	NA	5q35.2	NA	NA	NA	NA	rs12519232	0.12	0.12	0.108	0.0998403	0.171	0.1359	0.1037	0.0189	0.0961	0.18	0.13	0.13	0.03	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.619844	NA	NA	NA	NA	NA	0.174	NA	3.829
1269	12	45173858	45173858	T	A	intronic	NELL2	NA	NA	NA	intronic	ENSG00000184613	NA	NA	NA	NA	NA	12q12	NA	NA	NA	NA	rs1122352	0.24	0.24	0.234	0.251797	0.171	0.2599	0.2709	0.2693	0.2894	0.18	0.25	0.27	0.3	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.787749	NA	NA	NA	NA	NA	0.333	NA	3.829
1269	12	45173884	45173884	G	A	intronic	NELL2	NA	NA	NA	intronic	ENSG00000184613	NA	NA	NA	NA	NA	12q12	NA	NA	NA	NA	rs1122351	0.19	0.19	0.169	0.208666	0.171	0.2143	0.2608	0.1536	0.2791	0.18	0.2	0.25	0.15	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.526118	NA	NA	NA	NA	NA	0.225	NA	3.829
1269	15	41482013	41482013	A	G	intronic	EXD1	NA	NA	NA	intronic	ENSG00000178997	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs8039014	0.3	0.3	0.315	0.341454	0.171	0.2788	0.2161	0.5817	0.3456	0.15	0.3	0.22	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.027379	NA	NA	NA	NA	NA	0.348	NA	3.829
1269	17	73316679	73316679	G	C	intronic	GRB2	NA	NA	NA	intronic	ENSG00000177885	NA	NA	NA	NA	NA	17q25.1	NA	Name=Pol2	Name=58	NA	rs8079197	0.63	0.63	0.585	0.558107	0.7376	0.8274	0.6888	0.0961	0.6278	0.74	0.9	0.66	0.1	0.6965	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.162056	NA	NA	0.737209	0.208864	NA	0.486	NA	3.828691
1269	6	30899577	30899577	G	A	intronic	SFTA2	NA	NA	NA	intronic	ENSG00000196260	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs17196074	0.05	0.05	0.041	0.0339457	0.0577	0.003	0.0375	0.0552	0.0102	0.06	0.01	0.04	0.08	0.0518	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.815188	NA	NA	0.062016	0.049338	NA	0.007	NA	3.828484
1269	17	2203453	2203453	A	G	exonic	SMG6	NA	synonymous SNV	SMG6:NM_017575:exon2:c.T594C:p.A198A	exonic	ENSG00000070366	NA	synonymous SNV	ENSG00000070366:ENST00000263073:exon2:c.T594C:p.A198A,ENSG00000070366:ENST00000544865:exon2:c.T501C:p.A167A	NA	NA	17p13.3	NA	NA	NA	NA	rs216193	0.59	0.59	0.56	0.544529	0.6133	0.6806	0.6282	0.3487	0.5389	0.61	0.74	0.62	0.36	0.6012	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.87117	NA	NA	0.623721	0.414208	NA	0.529	NA	3.8284456
1269	12	118020037	118020037	C	A	intronic	KSR2	NA	NA	NA	intronic	ENSG00000171435	NA	NA	NA	NA	NA	12q24.22	NA	NA	NA	NA	rs1875142	0.07	0.07	0.059	0.0694888	0.0924	0.0258	0.0706	0.1021	0.046	0.09	0.02	0.08	0.09	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.446874	2.446874	NA	0.079195	0.100434	NA	0.138	NA	3.828405
1269	14	64556271	64556271	T	C	intronic	SYNE2	NA	NA	NA	intronic	ENSG00000054654,ENSG00000140009	NA	NA	NA	NA	NA	14q23.2	NA	NA	NA	NA	rs72720312	0.09	0.09	0.086	0.0924521	0.0467	0.0853	0.049	0.1876	0.0491	0.05	0.08	0.05	0.2	0.0701	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.826628	NA	NA	0.054957	0.144095	NA	0.101	NA	3.828243
1269	20	53260140	53260140	C	T	intronic	DOK5	NA	NA	NA	intronic	ENSG00000101134	NA	NA	NA	NA	NA	20q13.2	NA	NA	NA	NA	rs41274718	0.03	0.03	0.023	0.0209665	0.0666	NA	0.049	0.0008	0.0031	0.06	NA	0.06	NA	0.0452	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.630149	NA	NA	0.060116	0.01271	NA	0.065	NA	3.828084
1269	3	125649288	125649288	G	A	intronic	ALG1L	NA	NA	NA	intronic	ENSG00000189366	NA	NA	NA	NA	NA	3q21.2	NA	NA	NA	NA	rs7616019	0.22	0.22	0.161	0.233826	0.172	0.1071	0.1527	0.4841	0.1472	0.17	0.1	0.17	0.49	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.791401	NA	NA	NA	NA	NA	0.007	NA	3.828
1269	5	7875307	7875307	C	G	intronic	MTRR	NA	NA	NA	intronic	ENSG00000124275	NA	NA	NA	NA	NA	5p15.31	NA	NA	NA	NA	rs2303079	0.22	0.22	0.215	0.245807	0.172	0.1518	0.3429	0.3669	0.1861	0.17	0.17	0.29	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.464087	NA	NA	NA	NA	NA	0.29	NA	3.828
1269	7	75803132	75803132	C	T	intergenic	MDH2,SRRM3	dist=107202;dist=28084	NA	NA	ncRNA_intronic	ENSG00000228829	NA	NA	NA	NA	NA	7q11.23	NA	NA	NA	NA	rs4728587	0.19	0.19	0.153	0.185903	0.172	0.2619	0.2161	0.1377	0.1656	0.17	0.28	0.21	0.11	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.766964	NA	NA	NA	NA	NA	0.094	NA	3.828
1269	9	8320065	8320065	G	A	intronic	PTPRD	NA	NA	NA	intronic	ENSG00000153707	NA	NA	NA	NA	NA	9p24.1	NA	NA	NA	NA	rs3739578	0.24	0.24	0.187	0.273363	0.172	0.3869	0.3228	0.1278	0.4223	0.17	0.39	0.32	0.12	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.634877	NA	NA	NA	NA	NA	0.174	NA	3.828
1269	15	43252764	43252764	A	G	intronic	UBR1	NA	NA	NA	intronic	ENSG00000159459	NA	NA	NA	NA	NA	15q15.2	NA	NA	NA	NA	rs3759792	0.21	0.21	0.222	0.255391	0.172	0.1498	0.134	0.4198	0.3139	0.18	0.15	0.14	0.38	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.833675	NA	NA	NA	NA	NA	0.217	NA	3.828
1269	6	30890789	30890789	G	A	intronic	VARS2	NA	NA	NA	intronic	ENSG00000137411	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs3873330	0.05	0.05	0.039	0.0341454	0.0577	0.003	0.0375	0.056	0.0102	0.06	0.01	0.04	0.08	0.0525	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.976591	NA	NA	0.062061	0.049636	NA	0.007	NA	3.827739
1269	11	7847208	7847208	T	C	exonic	OR5P3	NA	synonymous SNV	OR5P3:NM_153445:exon1:c.A312G:p.V104V	exonic	ENSG00000182334	NA	synonymous SNV	ENSG00000182334:ENST00000328375:exon1:c.A312G:p.V104V	NA	NA	11p15.4	NA	NA	NA	NA	rs1482791	0.47	0.47	0.437	0.44349	0.6292	0.4762	0.5937	0.0711	0.6155	0.64	0.49	0.59	0.1	0.58	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.203653	NA	NA	0.629888	0.169488	NA	0.471	NA	3.8275786
1269	11	5079946	5079946	C	T	exonic	OR52E2	NA	synonymous SNV	OR52E2:NM_001005164:exon1:c.G912A:p.V304V	exonic	ENSG00000176787	NA	synonymous SNV	ENSG00000176787:ENST00000321522:exon1:c.G912A:p.V304V	Score=251;Name=lod=14	NA	11p15.4	NA	NA	NA	NA	rs2445332	0.9	0.9	0.888	0.901158	0.9414	0.7708	0.9524	0.8956	0.9652	0.94	0.77	0.96	0.93	0.9361	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.661459	NA	NA	0.961726	0.893458	NA	0.92	NA	3.8274406
1269	7	100416250	100416250	A	G	exonic	EPHB4	NA	synonymous SNV	EPHB4:NM_004444:exon7:c.T1314C:p.S438S	exonic	ENSG00000196411	NA	synonymous SNV	ENSG00000196411:ENST00000358173:exon7:c.T1314C:p.S438S,ENSG00000196411:ENST00000360620:exon7:c.T1314C:p.S438S	NA	NA	7q22.1	NA	NA	NA	NA	rs144173	0.58	0.58	0.567	0.563698	0.6282	0.6399	0.6671	0.407	0.5573	0.62	0.63	0.61	0.46	0.6059	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.592992	NA	NA	0.605349	0.457558	NA	0.674	NA	3.8272176
1269	19	1399476	1399476	T	C	intronic	GAMT	NA	NA	NA	intronic	ENSG00000130005	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs73515058	0.06	0.06	0.086	0.0864617	0.0527	0.0159	0.0331	0.1672	0.1227	0.06	0.02	0.04	0.15	0.0685	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.330582	NA	NA	0.051676	0.150591	NA	0.072	NA	3.827124
1269	6	110059510	110059510	C	A	intronic	FIG4	NA	NA	NA	intronic	ENSG00000112367	NA	NA	NA	NA	NA	6q21	NA	NA	Name=10	NA	rs2273752	0.35	0.35	0.312	0.338059	0.3986	0.3482	0.4035	0.1437	0.4816	0.4	0.41	0.4	0.15	0.3844	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.247592	1.247592	NA	0.389974	0.180663	NA	0.304	NA	3.827026
1269	2	89231382	89231382	G	A	intergenic	MIR4436A,NONE	dist=119414;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000253435	NA	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs12614252	0.27	0.27	0.237	0.274561	0.173	0.4048	0.2839	0.205	0.3323	0.17	0.49	0.25	0.2	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.074213	NA	NA	NA	NA	NA	0.138	NA	3.827
1269	3	11951282	11951282	A	C	intergenic	TAMM41,SYN2	dist=62930;dist=94580	NA	NA	ncRNA_exonic	ENSG00000251038	NA	NA	NA	NA	NA	3p25.2	NA	NA	NA	NA	rs9855914	0.3	0.3	0.288	0.323083	0.173	0.2381	0.1758	0.7065	0.1513	0.18	0.19	0.2	0.67	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.225652	NA	NA	NA	NA	NA	0.283	NA	3.827
1269	7	45753239	45753239	A	G	intronic	ADCY1	NA	NA	NA	intronic	ENSG00000164742	NA	NA	NA	NA	NA	7p12.3	NA	NA	NA	NA	rs2293107	0.14	0.14	0.135	0.1248	0.173	0.121	0.1052	0.1657	0.0378	0.17	0.1	0.13	0.14	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.395081	NA	NA	NA	NA	NA	0.232	NA	3.827
1269	9	37781891	37781891	C	T	intronic	EXOSC3	NA	NA	NA	intronic	ENSG00000107371,ENSG00000255872	NA	NA	NA	NA	NA	9p13.2	NA	NA	NA	NA	rs2296551	0.19	0.19	0.194	0.192492	0.173	0.0903	0.1758	0.382	0.0736	0.17	0.09	0.17	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.723237	NA	NA	NA	NA	NA	0.145	NA	3.827
1269	10	81318565	81318565	C	T	intronic	SFTPA2	NA	NA	NA	intronic	ENSG00000185303	NA	NA	NA	NA	NA	10q22.3	NA	NA	NA	NA	rs17882088	0.12	0.12	0.113	0.135184	0.173	0.0585	0.1945	0.0257	0.2812	0.19	0.07	0.21	0.03	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.460301	NA	NA	NA	NA	NA	0.058	NA	3.827
1269	11	102822649	102822649	T	C	intronic	MMP13	NA	NA	NA	intronic	ENSG00000137745	NA	NA	NA	NA	NA	11q22.2	NA	NA	NA	NA	rs11225490	0.18	0.18	0.19	0.214457	0.173	0.2232	0.1239	0.1876	0.3487	0.17	0.21	0.13	0.2	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.014231	NA	NA	NA	NA	NA	0.217	NA	3.827
1269	12	27143632	27143632	C	T	intronic	TM7SF3	NA	NA	NA	intronic	ENSG00000064115	NA	NA	NA	NA	NA	12p11.23	NA	NA	NA	NA	rs35719635	0.27	0.27	0.273	0.294728	0.173	0.4117	0.2205	0.3275	0.3078	0.18	0.4	0.21	0.32	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.255431	NA	NA	NA	NA	NA	0.232	NA	3.827
1269	13	37369136	37369136	A	T	intergenic	SERTM1,RFXAP	dist=97161;dist=24203	NA	NA	ncRNA_exonic	ENSG00000215486	NA	NA	NA	NA	NA	13q13.3	NA	NA	NA	NA	rs3934269	0.37	0.37	0.369	0.38738	0.173	0.5427	0.2925	0.5613	0.2802	0.16	0.53	0.25	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.209557	NA	NA	NA	NA	NA	0.348	NA	3.827
1269	18	45157181	45157181	T	C	intergenic	IER3IP1,SMAD2	dist=454436;dist=202285	NA	NA	ncRNA_exonic	ENSG00000267156	NA	NA	NA	NA	NA	18q21.1	NA	NA	NA	NA	rs3813071	0.17	0.17	0.152	0.161741	0.173	0.256	0.17	0.0363	0.2168	0.19	0.28	0.15	0.02	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.460066	NA	NA	NA	NA	NA	0.065	NA	3.827
1269	19	20408775	20408775	T	G	intergenic	ZNF486,MIR1270-1	dist=97476;dist=101306	NA	NA	ncRNA_intronic	ENSG00000267383,ENSG00000269274	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs11671050	0.26	0.26	0.248	0.252196	0.173	0.4613	0.3012	0.1324	0.2454	0.17	0.5	0.26	0.11	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.639636	NA	NA	NA	NA	NA	0.217	NA	3.827
1269	19	11313256	11313256	G	A	intronic	DOCK6	NA	NA	NA	intronic	ENSG00000130158	NA	NA	NA	NA	NA	19p13.2	Score=698;Name=V$BRACH_01	NA	NA	NA	rs3745682	0.35	0.35	0.309	0.360623	0.3887	0.37	0.4063	0.2216	0.4775	0.39	0.37	0.39	0.23	0.3929	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.518136	NA	NA	0.391722	0.237296	NA	0.217	NA	3.826678
1269	14	90813429	90813429	T	C	intergenic	NRDE2,CALM1	dist=14948;dist=49898	NA	NA	intergenic	ENSG00000119720,ENSG00000242571	dist=14948;dist=19612	NA	NA	Score=272;Name=lod=17	NA	14q32.11	NA	NA	NA	NA	rs2149652	0.56	0.56	0.526	0.528954	0.507	0.7817	0.4366	0.4312	0.4888	0.51	0.78	0.49	0.41	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.659816	NA	NA	NA	NA	NA	0.471	NA	3.8263334
1269	2	85489297	85489297	T	A	intronic	TCF7L1	NA	NA	NA	ncRNA_exonic	ENSG00000230299	NA	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs11686410	0.38	0.38	0.37	0.341054	0.507	0.2907	0.3429	0.2738	0.3119	0.5	0.29	0.38	0.29	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.62652	NA	NA	NA	NA	NA	0.37	NA	3.8263333
1269	19	49538738	49538738	G	C	downstream	CGB1	NA	NA	NA	intronic	ENSG00000267335	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs184313106	0.01	0.01	NA	0.013778	0.007	NA	0.0807	NA	0.0061	0.01	NA	0.03	NA	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.595076	NA	NA	NA	NA	NA	NA	NA	3.8263333
1269	20	44197087	44197087	G	A	intronic	WFDC8	NA	NA	NA	ncRNA_exonic	ENSG00000230860	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs6065836	0.46	0.46	0.442	0.478235	0.507	0.3403	0.4582	0.5976	0.4438	0.5	0.3	0.48	0.55	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.287807	NA	NA	NA	NA	NA	0.623	NA	3.8263333
1269	14	22236771	22236771	C	T	intergenic	OR4E2,DAD1	dist=102533;dist=797036	NA	NA	exonic	ENSG00000211780	NA	synonymous SNV	ENSG00000211780:ENST00000390428:exon1:c.C36T:p.F12F	NA	NA	14q11.2	NA	NA	NA	NA	rs11623408	0.17	0.17	0.162	0.155152	0.2406	0.1171	0.1455	0.1172	0.1646	0.23	0.12	0.17	0.14	0.1942	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.050949	NA	NA	0.238914	0.148571	NA	0.225	NA	3.826286
1269	18	77470451	77470451	G	A	intronic	CTDP1	NA	NA	NA	intronic	ENSG00000060069	NA	NA	NA	NA	NA	18q23	NA	NA	NA	NA	rs62097743	0.03	0.03	0.013	0.0179712	0.0696	0.001	0.0187	0.0008	0.0051	0.07	NA	0.01	NA	0.0439	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.666827	NA	NA	0.060465	0.013391	NA	0.051	NA	3.826035
1269	3	147884168	147884168	G	A	intergenic	ZIC1,AGTR1	dist=749662;dist=531490	NA	NA	ncRNA_exonic	ENSG00000205412	NA	NA	NA	NA	NA	3q24	NA	NA	NA	NA	rs12495960	0.15	0.15	0.127	0.13139	0.174	0.1042	0.1916	0.0938	0.1237	0.18	0.1	0.22	0.1	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.98877	NA	NA	NA	NA	NA	0.109	NA	3.826
1269	4	155249431	155249431	T	C	intronic	DCHS2	NA	NA	NA	intronic	ENSG00000197410	NA	NA	NA	NA	NA	4q31.3	NA	NA	NA	NA	rs1472070	0.13	0.13	0.11	0.154752	0.174	0.1538	0.1066	0.1067	0.2352	0.16	0.13	0.14	0.08	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.416185	NA	NA	NA	NA	NA	0.094	NA	3.826
1269	5	119016068	119016068	G	A	intergenic	FAM170A,PRR16	dist=44551;dist=783951	NA	NA	ncRNA_exonic	ENSG00000234259	NA	NA	NA	NA	NA	5q23.1	NA	NA	NA	NA	rs55734016	0.13	0.13	0.124	0.138978	0.174	0.0804	0.1138	0.1112	0.2188	0.18	0.07	0.13	0.12	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.29283	NA	0.75	NA	NA	NA	0.101	NA	3.826
1269	6	125621618	125621618	A	G	intronic	HDDC2	NA	NA	NA	intronic	ENSG00000111906	NA	NA	NA	NA	NA	6q22.31	NA	NA	NA	NA	rs2243390	0.28	0.28	0.317	0.283147	0.174	0.1429	0.2305	0.6505	0.0808	0.16	0.13	0.25	0.67	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.930976	NA	NA	NA	NA	NA	0.261	NA	3.826
1269	10	60150445	60150445	A	G	intronic	TFAM	NA	NA	NA	intronic	ENSG00000108064	NA	NA	NA	NA	NA	10q21.1	NA	NA	NA	NA	rs11006130	0.12	0.12	0.101	0.108027	0.174	0.001	0.1239	0.1702	0.0552	0.18	0.0017	0.17	0.13	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.95342	NA	NA	NA	NA	NA	0.109	NA	3.826
1269	11	117232492	117232492	C	T	intronic	CEP164	NA	NA	NA	intronic	ENSG00000110274	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs2305825	0.19	0.19	0.201	0.210064	0.174	0.1161	0.2594	0.2587	0.2434	0.16	0.11	0.26	0.28	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.366068	NA	NA	NA	NA	NA	0.188	NA	3.826
1269	17	16520433	16520433	C	G	intergenic	ZNF287,ZNF624	dist=47913;dist=3615	NA	NA	ncRNA_exonic	ENSG00000235554	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs4792757	0.27	0.27	0.224	0.249002	0.174	0.3333	0.2233	0.3525	0.1176	0.17	0.36	0.19	0.37	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.701706	1.701706	NA	NA	NA	NA	0.196	NA	3.826
1269	17	16552913	16552913	C	A	intronic	ZNF624	NA	NA	NA	intronic	ENSG00000197566	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs28626982	0.27	0.27	0.267	0.251797	0.174	0.3333	0.2233	0.3631	0.1176	0.17	0.36	0.19	0.38	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.946664	NA	NA	NA	NA	NA	0.196	NA	3.826
1269	17	78114033	78114033	G	A	intronic	EIF4A3	NA	NA	NA	intronic	ENSG00000141543	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs74003638	0.11	0.11	0.098	0.107228	0.174	0.0466	0.0908	0.0779	0.1524	0.18	0.05	0.08	0.08	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.036696	NA	NA	NA	NA	NA	0.08	NA	3.826
1269	19	8660890	8660890	G	A	intronic	ADAMTS10	NA	NA	NA	intronic	ENSG00000142303	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs28433973	0.11	0.11	0.111	0.127196	0.174	NA	0.0994	0.1415	0.2106	0.19	NA	0.09	0.15	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.579119	NA	NA	NA	NA	NA	0.08	NA	3.826
1269	19	10673302	10673302	C	A	intronic	KRI1	NA	NA	NA	intronic	ENSG00000129347	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs35523350	0.15	0.15	0.118	0.168331	0.174	0.1657	0.2968	0.0711	0.2055	0.16	0.14	0.25	0.05	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.627038	NA	NA	NA	NA	NA	0.13	NA	3.826
1269	19	19770329	19770329	T	C	intronic	ATP13A1	NA	NA	NA	intronic	ENSG00000105726	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs10403579	0.09	0.09	0.097	0.0874601	0.174	NA	0.1081	0.0537	0.1196	0.16	NA	0.14	0.07	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.421809	NA	NA	NA	NA	NA	0.101	NA	3.826
1269	20	47317529	47317529	C	T	intronic	PREX1	NA	NA	NA	intronic	ENSG00000124126	NA	NA	NA	NA	NA	20q13.13	NA	NA	NA	NA	rs12479966	0.14	0.14	0.12	0.152356	0.174	0.1498	0.2406	0.0189	0.2505	0.16	0.15	0.23	0.02	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.906586	NA	NA	NA	NA	NA	0.138	NA	3.826
1269	21	43557430	43557430	G	A	intronic	UMODL1	NA	NA	NA	intronic	ENSG00000177398	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs55819032	0.18	0.18	0.174	0.218051	0.174	0.253	0.2435	0.1452	0.3078	0.17	0.23	0.2	0.12	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.222204	NA	NA	NA	NA	NA	0.203	NA	3.826
1269	21	43557445	43557445	C	T	intronic	UMODL1	NA	NA	NA	intronic	ENSG00000177398	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs3819139	0.18	0.18	0.171	0.215056	0.174	0.253	0.2435	0.1339	0.3078	0.17	0.23	0.2	0.11	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.26665	NA	NA	NA	NA	NA	0.203	NA	3.826
1269	14	22237187	22237187	C	T	intergenic	OR4E2,DAD1	dist=102949;dist=796620	NA	NA	exonic	ENSG00000211780	NA	synonymous SNV	ENSG00000211780:ENST00000390428:exon2:c.C264T:p.L88L	NA	NA	14q11.2	NA	NA	NA	NA	rs4329837	0.17	0.17	0.164	0.154752	0.2406	0.1171	0.1455	0.1172	0.1626	0.23	0.12	0.17	0.14	0.1941	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.903368	NA	NA	0.239457	0.148925	NA	0.225	NA	3.825843
1269	2	174229731	174229731	A	G	intronic	CDCA7	NA	NA	NA	intronic	ENSG00000144354	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	rs13382180	0.17	0.17	0.162	0.209864	0.0298	0.3036	0.1081	0.2821	0.273	0.04	0.31	0.11	0.27	0.1093	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.002707	NA	NA	0.035306	0.209736	NA	0.174	NA	3.825594
1269	17	53844647	53844647	C	T	intronic	PCTP	NA	NA	NA	intronic	ENSG00000141179	NA	NA	NA	NA	NA	17q22	NA	NA	NA	NA	rs16956397	0.06	0.06	0.056	0.0565096	0.0547	0.0704	0.0865	0.0575	0.0215	0.06	0.06	0.07	0.07	0.057	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.746557	2.746557	NA	0.062791	0.062869	NA	0.043	NA	3.825509
1269	1	9627521	9627521	A	G	intronic	SLC25A33	NA	NA	NA	intronic	ENSG00000171612	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs6698575	0.27	0.27	0.275	0.278155	0.175	0.3115	0.1671	0.4592	0.184	0.18	0.3	0.17	0.46	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.032429	2.032429	NA	NA	NA	NA	0.478	NA	3.825
1269	1	16376494	16376494	C	G	intronic	CLCNKB	NA	NA	NA	intronic	ENSG00000184908	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs72651918	0.16	0.16	0.117	0.166933	0.175	0.2907	0.1484	0.0575	0.1922	0.17	0.25	0.13	0.07	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.270694	NA	NA	NA	NA	NA	0.08	NA	3.825
1269	4	69332537	69332537	G	A	intronic	TMPRSS11E	NA	NA	NA	intronic	ENSG00000087128	NA	NA	NA	NA	NA	4q13.2	NA	NA	NA	NA	rs2278922	0.14	0.14	0.108	0.142572	0.175	0.0863	0.304	0.0598	0.1646	0.18	0.08	0.27	0.06	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.108545	NA	NA	NA	NA	NA	0.08	NA	3.825
1269	5	146722890	146722890	C	T	intronic	STK32A	NA	NA	NA	intronic	ENSG00000169302	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs6884181	0.31	0.31	0.33	0.336062	0.175	0.2579	0.281	0.6611	0.182	0.17	0.23	0.26	0.67	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.589603	NA	NA	NA	NA	NA	0.428	NA	3.825
1269	7	45743538	45743538	C	G	intronic	ADCY1	NA	NA	NA	intronic	ENSG00000164742	NA	NA	NA	NA	NA	7p12.3	NA	NA	NA	NA	rs55969720	0.16	0.16	0.182	0.153754	0.175	0.121	0.1196	0.2663	0.0378	0.17	0.1	0.14	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.247478	NA	NA	NA	NA	NA	0.268	NA	3.825
1269	7	45744055	45744055	C	T	intronic	ADCY1	NA	NA	NA	intronic	ENSG00000164742	NA	NA	NA	NA	NA	7p12.3	NA	NA	NA	NA	rs2272036	0.16	0.16	0.185	0.169928	0.175	0.121	0.1254	0.3245	0.0378	0.17	0.1	0.15	0.25	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.795145	NA	NA	NA	NA	NA	0.283	NA	3.825
1269	8	62465795	62465795	T	C	intronic	ASPH	NA	NA	NA	intronic	ENSG00000198363	NA	NA	NA	NA	NA	8q12.3	NA	NA	NA	NA	rs4291265	0.34	0.34	0.339	0.343051	0.175	0.3591	0.2205	0.6694	0.1452	0.16	0.38	0.2	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.945308	NA	NA	NA	NA	NA	0.29	NA	3.825
1269	18	56182145	56182145	A	G	intronic	ALPK2	NA	NA	NA	intronic	ENSG00000198796	NA	NA	NA	NA	NA	18q21.31	NA	NA	NA	NA	rs59425126	0.11	0.11	0.118	0.11222	0.175	0.0228	0.0893	0.143	0.1145	0.18	0.03	0.09	0.11	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.531102	NA	NA	NA	NA	NA	0.022	NA	3.825
1269	19	6937172	6937172	C	A	intronic	EMR1	NA	NA	NA	intronic	ENSG00000174837	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs12981770	0.13	0.13	0.114	0.10603	0.175	0.002	0.2133	0.0953	0.0808	0.18	0.02	0.21	0.12	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.305758	NA	NA	NA	NA	NA	0.101	NA	3.825
1270	15	54847726	54847726	T	C	intronic	UNC13C	NA	NA	NA	intronic	ENSG00000137766	NA	NA	NA	NA	NA	15q21.3	NA	NA	NA	NA	rs62022212	0.06	0.06	0.03	0.0589058	0.0567	0.0228	0.1801	0.0287	0.0532	0.06	0.02	0.13	0.03	0.0712	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.200728	NA	NA	0.047509	0.033809	NA	NA	NA	3.824591
1270	10	117278891	117278891	C	T	intronic	ATRNL1	NA	NA	NA	intronic	ENSG00000107518	NA	NA	NA	NA	NA	10q25.3	NA	NA	NA	NA	rs41310290	0.04	0.04	0.031	0.0307508	0.0815	NA	0.072	0.0045	0.0164	0.07	NA	0.08	0.01	NA	0.094	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.221574	NA	NA	0.093966	0.015173	NA	0.014	NA	3.824534
1270	9	8331548	8331548	C	T	intronic	PTPRD	NA	NA	NA	intronic	ENSG00000153707	NA	NA	NA	NA	NA	9p24.1	NA	NA	NA	NA	rs76379489	0.03	0.03	0.034	0.0567093	0.0487	0.0288	0.0447	0.003	0.1748	0.05	0.03	0.06	0.0041	0.0931	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.132511	NA	NA	0.033721	0.012256	NA	0.029	NA	3.824479
1270	10	43318557	43318557	T	C	intronic	BMS1	NA	NA	NA	intronic	ENSG00000165733	NA	NA	NA	NA	NA	10q11.21	NA	NA	NA	NA	rs113467153	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.1756	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.721903	1.721903	NA	NA	NA	NA	NA	NA	3.8244
1270	20	56064099	56064099	T	C	intergenic	MIR5095,CTCFL	dist=65821;dist=6922	NA	NA	upstream	ENSG00000124097	NA	NA	NA	Score=820;Name=lod=2867	NA	20q13.31	NA	NA	NA	NA	rs116593113	NA	NA	0.129	0.227636	0.337	0.2361	0.183	0.0673	0.3548	NA	NA	NA	NA	0.2751	0.064	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.085548	NA	NA	0.0635	0.007425	NA	NA	NA	3.8244
1270	20	60572568	60572568	G	A	intronic	TAF4	NA	NA	NA	intronic	ENSG00000130699	NA	NA	NA	NA	NA	20q13.33	NA	NA	NA	NA	rs41284980	0.03	0.03	0.033	0.0209665	0.0696	NA	0.0259	0.003	0.0133	0.07	NA	0.03	0.01	0.0452	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.920549	NA	NA	0.06093	0.009759	NA	0.072	NA	3.82427
1270	1	205031769	205031769	G	A	intronic	CNTN2	NA	NA	NA	intronic	ENSG00000184144	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs2242000	0.23	0.23	0.195	0.232029	0.1759	0.3958	0.2651	0.0946	0.2832	0.18	0.41	0.27	0.09	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.117905	NA	NA	NA	NA	NA	0.145	NA	3.8241
1270	7	4152863	4152863	G	C	intronic	SDK1	NA	NA	NA	intronic	ENSG00000146555	NA	NA	NA	NA	NA	7p22.2	NA	NA	NA	NA	rs6956409	0.09	0.09	0.085	0.0960463	0.1759	0.004	0.1225	0.0499	0.1524	0.17	0.0017	0.09	0.08	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.426729	NA	NA	NA	NA	NA	0.138	NA	3.8241
1270	7	21654970	21654970	A	G	intronic	DNAH11	NA	NA	NA	intronic	ENSG00000105877	NA	NA	NA	NA	NA	7p15.3	NA	NA	NA	NA	rs55937657	0.15	0.15	0.147	0.135783	0.1759	0.1796	0.1081	0.0938	0.1258	0.17	0.21	0.13	0.08	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.31839	NA	NA	NA	NA	NA	0.225	NA	3.8241
1270	7	99936427	99936427	T	C	intergenic	PMS2P1,PILRB	dist=2497;dist=19199	NA	NA	ncRNA_exonic	ENSG00000242294	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs3991564	0.11	0.11	0.072	0.107228	0.1759	0.0278	0.1023	0.1165	0.1094	0.18	0.03	0.1	0.1	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.780265	NA	NA	NA	NA	NA	NA	NA	3.8241
1270	7	99950297	99950297	A	T	intergenic	PMS2P1,PILRB	dist=16367;dist=5329	NA	NA	ncRNA_exonic	ENSG00000235333	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs7795656	0.11	0.11	0.097	0.107428	0.1759	0.0278	0.1037	0.1165	0.1094	0.18	0.02	0.1	0.09	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.680842	NA	NA	NA	NA	NA	0.087	NA	3.8241
1270	7	99956893	99956893	A	T	intronic	PILRB	NA	NA	NA	intronic	ENSG00000121716	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs11761426	0.1	0.1	0.101	0.104832	0.1759	0.0278	0.1023	0.1074	0.1094	0.18	0.02	0.1	0.09	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.255907	NA	NA	NA	NA	NA	0.123	NA	3.8241
1270	11	48928797	48928797	T	C	intergenic	OR4A47,TRIM49B	dist=417523;dist=124355	NA	NA	ncRNA_intronic	ENSG00000255527	NA	NA	NA	NA	NA	11p11.12	NA	NA	NA	NA	rs11040129	0.19	0.19	0.184	0.196086	0.1759	0.1657	0.1527	0.2995	0.1391	0.17	0.16	0.14	0.27	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.699237	NA	NA	NA	NA	NA	0.174	NA	3.8241
1270	11	48967332	48967332	A	C	intergenic	OR4A47,TRIM49B	dist=456058;dist=85820	NA	NA	ncRNA_exonic	ENSG00000249910	NA	NA	NA	NA	NA	11p11.12	NA	NA	NA	NA	rs59149821	0.18	0.18	0.148	0.196086	0.1759	0.1677	0.1527	0.2988	0.138	0.17	0.16	0.14	0.26	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.47602	NA	NA	NA	NA	NA	0.152	NA	3.8241
1270	11	74842627	74842627	T	C	intergenic	OR2AT4,SLCO2B1	dist=41869;dist=19405	NA	NA	ncRNA_exonic	ENSG00000254475	NA	NA	NA	NA	NA	11q13.4	NA	NA	NA	NA	rs4245441	NA	NA	0.258	0.323083	0.1759	0.3046	0.379	0.4312	0.3078	NA	NA	NA	NA	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.481949	NA	NA	NA	NA	NA	0.29	NA	3.8241
1270	12	108098587	108098587	G	A	intronic	PWP1	NA	NA	NA	intronic	ENSG00000136045	NA	NA	NA	NA	NA	12q23.3	NA	NA	NA	NA	rs2287217	0.25	0.25	0.217	0.223043	0.1759	0.4861	0.2867	0.0129	0.2393	0.18	0.55	0.24	0.03	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.026405	NA	NA	NA	NA	NA	0.167	NA	3.8241
1270	16	20618219	20618219	G	T	intergenic	ACSM2B,ACSM1	dist=30524;dist=16340	NA	NA	ncRNA_intronic	ENSG00000260762	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs6497508	0.33	0.33	0.338	0.380391	0.1759	0.3492	0.2003	0.6467	0.3906	0.19	0.34	0.2	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.79892	NA	NA	NA	NA	NA	0.391	NA	3.8241
1270	19	39955304	39955304	T	C	intronic	SUPT5H	NA	NA	NA	intronic	ENSG00000196235	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs73035432	0.11	0.11	0.087	0.1248	0.1759	0.0407	0.1412	0.0401	0.2618	0.18	0.03	0.18	0.05	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.554458	NA	NA	NA	NA	NA	0.087	NA	3.8241
1270	20	56064100	56064100	T	C	intergenic	MIR5095,CTCFL	dist=65822;dist=6921	NA	NA	upstream	ENSG00000124097	NA	NA	NA	Score=820;Name=lod=2867	NA	20q13.31	NA	NA	NA	NA	rs116355135	0.23	0.23	0.129	0.227636	0.337	0.2361	0.183	0.0673	0.3548	0.35	0.23	0.18	0.08	0.2753	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.335081	NA	NA	0.063926	0.00697	NA	NA	NA	3.823774
1270	19	32930069	32930069	G	A	exonic	DPY19L3	NA	synonymous SNV	DPY19L3:NM_001172774:exon7:c.G648A:p.A216A,DPY19L3:NM_207325:exon7:c.G648A:p.A216A	exonic	ENSG00000178904	NA	synonymous SNV	ENSG00000178904:ENST00000342179:exon7:c.G648A:p.A216A,ENSG00000178904:ENST00000392250:exon7:c.G648A:p.A216A,ENSG00000178904:ENST00000586987:exon7:c.G648A:p.A216A	NA	NA	19q13.11	NA	NA	NA	NA	rs6510249	0.59	0.59	0.593	0.546725	0.6402	0.6399	0.4294	0.4334	0.591	0.65	0.65	0.51	0.48	0.5811	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.691631	NA	NA	0.621628	0.465048	NA	0.543	NA	3.8237386
1270	18	60036083	60036083	A	G	exonic	TNFRSF11A	NA	synonymous SNV	TNFRSF11A:NM_003839:exon9:c.A933G:p.T311T	exonic	ENSG00000141655	NA	synonymous SNV	ENSG00000141655:ENST00000586569:exon9:c.A933G:p.T311T	NA	NA	18q21.33	Score=787;Name=V$HEN1_01	NA	NA	NA	rs8092336	0.98	0.98	0.978	0.980831	0.9513	1	0.9885	0.997	0.9642	0.94	1	0.99	1	0.9562	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.076994	NA	NA	0.935581	0.988425	NA	0.986	NA	3.8235856
1270	20	3682275	3682275	A	G	exonic	SIGLEC1	NA	synonymous SNV	SIGLEC1:NM_023068:exon6:c.T1242C:p.T414T	exonic	ENSG00000088827	NA	synonymous SNV	ENSG00000088827:ENST00000202578:exon6:c.T1242C:p.T414T,ENSG00000088827:ENST00000344754:exon6:c.T1242C:p.T414T	NA	NA	20p13	NA	NA	NA	NA	rs1018492	0.68	0.68	0.683	0.716054	0.5795	0.7629	0.6758	0.7806	0.7495	0.59	0.74	0.64	0.78	0.6676	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.221703	NA	NA	0.596047	0.744212	NA	0.746	NA	3.8235196
1270	18	43310187	43310187	A	G	intronic	SLC14A1	NA	NA	NA	ncRNA_UTR5	ENSG00000141469	NA	NA	NA	NA	NA	18q12.3	NA	NA	NA	NA	rs8090908	0.44	0.44	0.413	0.402356	0.5099	0.5188	0.5115	0.1853	0.3875	0.51	0.52	0.52	0.19	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.28828	1.28828	NA	NA	NA	NA	0.406	NA	3.8234333
1270	2	136594158	136594158	G	A	exonic	LCT	NA	synonymous SNV	LCT:NM_002299:exon1:c.C582T:p.T194T	exonic	ENSG00000115850	NA	synonymous SNV	ENSG00000115850:ENST00000264162:exon1:c.C582T:p.T194T	NA	NA	2q21.3	NA	NA	NA	NA	rs2236783	0.41	0.41	0.363	0.348442	0.5964	0.372	0.402	0.1233	0.3354	0.6	0.38	0.43	0.12	0.5487	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.499311	NA	NA	0.69814	0.238084	NA	0.457	NA	3.8234266
1270	20	3527884	3527884	G	A	intronic	ATRN	NA	NA	NA	intronic	ENSG00000088812	NA	NA	NA	NA	NA	20p13	NA	NA	Name=5	NA	rs239187	0.32	0.32	0.324	0.324481	0.4145	0.0298	0.2594	0.5991	0.2106	0.4	0.03	0.28	0.56	0.3536	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.672514	NA	NA	0.408605	0.578302	NA	0.413	NA	3.823295
1270	5	78265096	78265096	C	T	intronic	ARSB	NA	NA	NA	intronic	ENSG00000113273	NA	NA	NA	NA	NA	5q14.1	NA	NA	NA	NA	rs918580	0.23	0.23	0.257	0.290935	0.1769	0.127	0.1931	0.5318	0.3211	0.19	0.08	0.17	0.52	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.466217	NA	NA	NA	NA	NA	0.232	NA	3.8231
1270	5	169812194	169812194	C	T	intronic	KCNIP1,KCNMB1	NA	NA	NA	intronic	ENSG00000145936,ENSG00000182132	NA	NA	NA	NA	NA	5q35.1	NA	NA	NA	NA	rs2071157	0.21	0.21	0.196	0.241014	0.1769	0.2282	0.2046	0.2648	0.3139	0.18	0.26	0.18	0.21	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.156472	NA	NA	NA	NA	NA	0.123	NA	3.8231
1270	7	39874338	39874338	T	C	intergenic	LINC00265,CDK13	dist=40116;dist=115621	NA	NA	ncRNA_exonic	ENSG00000233225	NA	NA	NA	NA	NA	7p14.1	NA	NA	NA	NA	rs79689776	0.2	0.2	0.149	0.217053	0.1769	0.2956	0.1916	0.1104	0.3395	0.17	0.3	0.19	0.14	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.248912	NA	NA	NA	NA	NA	0.101	NA	3.8231
1270	16	21033521	21033521	G	A	intronic	DNAH3	NA	NA	NA	intronic	ENSG00000158486	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs62034888	0.08	0.08	0.079	0.0541134	0.1769	0.001	0.0836	0.0076	0.0245	0.17	NA	0.08	0.01	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.762733	1.762733	NA	NA	NA	NA	0.029	NA	3.8231
1270	16	84476022	84476022	A	G	intronic	ATP2C2	NA	NA	NA	intronic	ENSG00000064270	NA	NA	NA	NA	NA	16q24.1	NA	NA	NA	NA	rs2288582	0.28	0.28	0.254	0.283147	0.1769	0.5208	0.3127	0.1641	0.2873	0.17	0.52	0.27	0.15	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.038626	NA	NA	NA	NA	NA	0.225	NA	3.8231
1270	17	17118689	17118689	G	A	intronic	FLCN	NA	NA	NA	intronic	ENSG00000133030,ENSG00000154803,ENSG00000264187	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs34311146	0.09	0.09	0.086	0.0730831	0.1769	NA	0.1513	0.0121	0.0685	0.18	NA	0.14	0.02	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.785993	NA	NA	NA	NA	NA	0.13	NA	3.8231
1270	18	21124834	21124834	A	G	intronic	NPC1	NA	NA	NA	intronic	ENSG00000141458	NA	NA	NA	NA	NA	18q11.2	NA	NA	NA	NA	rs35047242	0.11	0.11	0.103	0.118211	0.1769	0.005	0.1124	0.1014	0.2014	0.18	0.0017	0.14	0.11	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.498444	NA	NA	NA	NA	NA	0.08	NA	3.8231
1270	21	45799164	45799164	T	C	intronic	TRPM2	NA	NA	NA	intronic	ENSG00000142185	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs2838556	0.24	0.24	0.245	0.239417	0.1769	0.1577	0.219	0.4281	0.1472	0.18	0.17	0.2	0.44	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.534703	NA	NA	NA	NA	NA	0.297	NA	3.8231
1270	10	129179653	129179653	C	T	intronic	DOCK1	NA	NA	NA	intronic	ENSG00000150760	NA	NA	NA	NA	NA	10q26.2	NA	NA	NA	NA	rs6482833	0.05	0.05	0.05	0.0409345	0.0656	0.004	0.0519	0.0635	0.0153	0.06	0.0017	0.05	0.08	0.0491	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.143493	NA	NA	0.062362	0.052055	NA	0.036	NA	3.822938
1270	1	151742798	151742798	T	C	intronic	OAZ3	NA	NA	NA	UTR3	ENSG00000182134	ENST00000525790:c.*1443A>G	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs3748612	0.31	0.31	0.312	0.289936	0.3439	0.3046	0.3545	0.2564	0.2188	0.34	0.29	0.36	0.27	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.180614	4.180614	NA	NA	NA	NA	0.377	NA	3.8227667
1270	11	88386300	88386300	C	T	intronic	GRM5	NA	NA	NA	intronic	ENSG00000168959	NA	NA	NA	NA	NA	11q14.3	NA	NA	NA	NA	rs17770948	0.06	0.06	0.054	0.0511182	0.0586	0.0565	0.0576	0.0537	0.0297	0.05	0.07	0.06	0.05	0.0619	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.125447	NA	NA	0.056784	0.052022	NA	0.094	NA	3.822716
1270	12	48145456	48145456	G	A	intronic	RAPGEF3	NA	NA	NA	intronic	ENSG00000079337	NA	NA	NA	NA	NA	12q13.11	NA	NA	NA	NA	rs4141223	0.06	0.06	0.051	0.0792732	0.0606	0.0496	0.0476	0.0582	0.18	0.06	0.07	0.03	0.05	0.0673	0.076	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.633502	NA	NA	0.049535	0.042669	NA	0.058	NA	3.822565
1270	12	45410075	45410075	A	G	exonic	DBX2	NA	synonymous SNV	DBX2:NM_001004329:exon4:c.T1014C:p.A338A	exonic	ENSG00000185610	NA	synonymous SNV	ENSG00000185610:ENST00000332700:exon4:c.T1014C:p.A338A	NA	NA	12q12	NA	NA	NA	NA	rs1224442	0.68	0.68	0.661	0.734225	0.5825	0.7887	0.732	0.7065	0.8732	0.58	0.78	0.72	0.69	0.6691	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.721918	NA	NA	0.592558	0.667499	NA	0.609	NA	3.8225086
1270	11	106579204	106579204	C	A	intronic	GUCY1A2	NA	NA	NA	intronic	ENSG00000152402	NA	NA	NA	NA	NA	11q22.3	NA	NA	Name=5	NA	rs12420232	0.41	0.41	0.403	0.393171	0.4066	0.6855	0.3285	0.1884	0.4008	0.41	0.65	0.35	0.19	0.3898	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.430288	NA	NA	0.381224	0.214902	NA	0.377	NA	3.822376
1270	9	115946170	115946170	A	G	intronic	FKBP15	NA	NA	NA	intronic	ENSG00000119321	NA	NA	NA	NA	NA	9q32	NA	NA	NA	NA	rs10981674	0.05	0.05	0.051	0.0786741	0.0477	0.0387	0.036	0.0991	0.1544	0.05	0.02	0.03	0.11	0.0665	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.761378	NA	NA	0.06343	0.104595	NA	0.101	NA	3.82237
1270	1	11860458	11860458	C	T	intronic	MTHFR	NA	NA	NA	intronic	ENSG00000177000	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs2066471	0.11	0.11	0.111	0.114018	0.1779	0.1002	0.0778	0.0106	0.228	0.19	0.09	0.11	0.02	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.623674	NA	NA	NA	NA	NA	0.123	NA	3.8221
1270	2	233348647	233348647	G	A	intronic	ECEL1	NA	NA	NA	intronic	ENSG00000171551	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs2241755	0.11	0.11	0.1	0.0940495	0.1779	0.0744	0.1254	0.0091	0.1207	0.16	0.08	0.14	0.02	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.763585	NA	NA	NA	NA	NA	0.101	NA	3.8221
1270	4	104061351	104061351	T	C	intronic	CENPE	NA	NA	NA	intronic	ENSG00000138778	NA	NA	NA	NA	NA	4q24	NA	NA	NA	NA	rs7664021	0.14	0.14	0.138	0.169928	0.1779	0.1548	0.1916	0.0461	0.3292	0.17	0.14	0.19	0.05	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.229377	NA	NA	NA	NA	NA	0.239	NA	3.8221
1270	5	94820639	94820639	G	A	intronic	TTC37	NA	NA	NA	intronic	ENSG00000198677	NA	NA	NA	NA	NA	5q15	NA	NA	NA	NA	rs6891486	0.25	0.25	0.267	0.28135	0.1779	0.124	0.196	0.559	0.2352	0.18	0.13	0.21	0.52	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.136444	NA	NA	NA	NA	NA	0.362	NA	3.8221
1270	5	110818421	110818421	C	T	intronic	CAMK4	NA	NA	NA	intronic	ENSG00000152495	NA	NA	NA	NA	NA	5q22.1	NA	NA	NA	NA	rs3733995	0.16	0.16	0.164	0.143371	0.1779	0.0536	0.1585	0.239	0.0603	0.16	0.07	0.19	0.24	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000909	NA	NA	NA	NA	NA	0.254	NA	3.8221
1270	5	128365489	128365489	A	G	intronic	SLC27A6	NA	NA	NA	intronic	ENSG00000113396	NA	NA	NA	NA	NA	5q23.3	NA	NA	NA	NA	rs2289215	0.2	0.2	0.192	0.226038	0.1779	0.2401	0.2219	0.236	0.2505	0.18	0.2	0.2	0.25	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.433717	NA	NA	NA	NA	NA	0.319	NA	3.8221
1270	6	32411362	32411362	A	C	intronic	HLA-DRA	NA	NA	NA	intronic	ENSG00000204287	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs13218331	0.12	0.12	0.099	0.120607	0.1779	0.0516	0.1138	0.0976	0.1687	0.18	0.05	0.12	0.11	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.350044	NA	NA	NA	NA	NA	0.123	NA	3.8221
1270	8	23294392	23294392	C	T	intronic	ENTPD4	NA	NA	NA	intronic	ENSG00000197217	NA	NA	NA	NA	NA	8p21.3	NA	NA	NA	NA	rs2272643	0.12	0.12	0.107	0.105232	0.1779	0.0565	0.2305	0.0424	0.0767	0.2	0.06	0.2	0.03	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.69303	NA	NA	NA	NA	NA	0.123	NA	3.8221
1270	11	102573912	102573912	C	T	intronic	MMP27	NA	NA	NA	intronic	ENSG00000137675	NA	NA	NA	NA	NA	11q22.2	NA	NA	NA	NA	rs61893941	0.12	0.12	0.112	0.101438	0.1779	0.1071	0.1715	0.0083	0.093	0.19	0.1	0.13	0.01	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.468748	NA	NA	NA	NA	NA	0.029	NA	3.8221
1270	15	52702400	52702400	G	A	intronic	MYO5A	NA	NA	NA	intronic	ENSG00000197535	NA	NA	NA	NA	NA	15q21.2	NA	NA	NA	NA	rs10518689	0.16	0.16	0.149	0.146366	0.1779	0.1766	0.1542	0.0893	0.1544	0.18	0.19	0.19	0.09	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.904357	NA	NA	NA	NA	NA	0.152	NA	3.8221
1270	22	40797447	40797447	T	A	intronic	SGSM3	NA	NA	NA	intronic	ENSG00000100359	NA	NA	NA	NA	NA	22q13.1	NA	NA	NA	NA	rs9611337	0.34	0.34	0.241	0.338658	0.1779	0.2163	0.4827	0.6399	0.1207	0.17	0.24	0.43	0.63	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.503882	NA	NA	NA	NA	NA	0.42	NA	3.8221
1270	19	41430151	41430151	G	T	upstream	CYP2B7P1	NA	NA	NA	ncRNA_exonic	ENSG00000256612	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs34418474	0.15	0.15	0.125	0.123203	0.163	0.2103	0.0937	0.0817	0.0695	0.16	0.2	0.1	0.11	0.1816	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.326169	1.326169	NA	NA	NA	NA	0.196	NA	3.8220666
1270	10	95162660	95162660	T	A	intronic	MYOF	NA	NA	NA	intronic	ENSG00000138119	NA	NA	NA	NA	NA	10q23.33	NA	NA	NA	NA	rs41290206	0.03	0.03	0.023	0.0305511	0.0666	0.001	0.0418	0.0272	0.0204	0.06	NA	0.04	0.02	0.0468	0.065	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.495326	NA	NA	0.064765	0.043132	NA	0.036	NA	3.821835
1270	10	95162147	95162147	G	T	intronic	MYOF	NA	NA	NA	intronic	ENSG00000138119	NA	NA	NA	NA	NA	10q23.33	NA	NA	NA	NA	rs41290204	0.03	0.03	0.03	0.0305511	0.0666	0.001	0.0418	0.0272	0.0204	0.06	NA	0.04	0.02	0.0467	0.065	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.023957	NA	NA	0.064981	0.041989	NA	0.036	NA	3.821719
1270	2	111551763	111551763	A	G	intronic	ACOXL	NA	NA	NA	intronic	ENSG00000153093	NA	NA	NA	NA	NA	2q13	NA	NA	NA	NA	rs13388313	0.15	0.15	0.148	0.168331	0.0388	0.0516	0.1124	0.4569	0.0716	0.03	0.05	0.11	0.49	0.0883	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.105597	NA	NA	0.051195	0.408069	ID=COSN166246;OCCURENCE=1(NS)	0.21	NA	3.821705
1270	6	133138249	133138249	T	C	intronic	RPS12	NA	NA	NA	intronic	ENSG00000112306	NA	NA	NA	NA	NA	6q23.2	NA	Name=CTCF_(SC-5916)	NA	NA	rs2236381	0.4	0.4	0.376	0.41893	0.3757	0.2847	0.5908	0.4614	0.4223	0.37	0.29	0.58	0.43	0.4138	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.903192	NA	NA	0.388876	0.444848	NA	0.348	NA	3.821624
1270	2	74604673	74604673	C	T	intronic	DCTN1	NA	NA	NA	intronic	ENSG00000204843	NA	NA	NA	NA	NA	2p13.1	NA	NA	NA	NA	rs3213672	0.28	0.28	0.292	0.293331	0.0915	0.4266	0.1542	0.4697	0.2239	0.09	0.45	0.16	0.43	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.041887	NA	NA	0.087052	0.406792	NA	0.254	NA	3.821448
1270	6	146719883	146719883	C	A	intronic	GRM1	NA	NA	NA	intronic	ENSG00000152822	NA	NA	NA	NA	NA	6q24.3	NA	NA	NA	NA	rs362856	0.21	0.21	0.229	0.213059	0.0467	0.2738	0.0692	0.4637	0.0849	0.05	0.3	0.06	0.45	0.0975	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.962287	NA	NA	0.034419	0.397413	NA	0.152	NA	3.821381
1270	10	134650440	134650440	T	C	intronic	TTC40	NA	NA	NA	intronic	ENSG00000171811	NA	NA	NA	NA	NA	10q26.3	NA	Name=CTCF	NA	NA	rs3750580	0.31	0.31	0.266	0.306709	0.3917	0.2718	0.513	0.0991	0.3896	0.39	0.27	0.48	0.11	0.3915	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.022815	NA	NA	0.395581	0.143668	NA	0.21	NA	3.821219
1270	19	44890697	44890697	A	G	exonic	ZNF285	NA	synonymous SNV	ZNF285:NM_152354:exon4:c.T1710C:p.H570H	exonic	ENSG00000267508	NA	synonymous SNV	ENSG00000267508:ENST00000330997:exon4:c.T1710C:p.H570H,ENSG00000267508:ENST00000544719:exon4:c.T1710C:p.H570H,ENSG00000267508:ENST00000591679:exon5:c.T1731C:p.H577H	NA	NA	19q13.31	NA	NA	NA	NA	rs1836280	0.5	0.5	0.45	0.480232	0.6571	0.5069	0.438	0.2776	0.5746	0.63	0.53	0.46	0.28	0.5582	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.60365	NA	NA	0.630233	0.357694	NA	0.348	NA	3.8211336
1270	1	21902950	21902950	C	A	intronic	ALPL	NA	NA	NA	intronic	ENSG00000162551	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs1780329	0.32	0.32	0.29	0.322684	0.1789	0.4673	0.3184	0.3707	0.2597	0.18	0.49	0.31	0.33	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.103946	NA	NA	NA	NA	NA	0.217	NA	3.8211
1270	1	89652846	89652846	G	A	intronic	GBP4	NA	NA	NA	intronic	ENSG00000162654	NA	NA	NA	NA	NA	1p22.2	NA	NA	NA	NA	rs12129014	0.27	0.27	0.242	0.252396	0.1789	0.372	0.3703	0.2292	0.1524	0.19	0.39	0.3	0.24	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.075412	NA	NA	NA	NA	NA	0.246	NA	3.8211
1270	3	9801080	9801080	G	A	intronic	CAMK1,OGG1	NA	NA	NA	intronic	ENSG00000114026,ENSG00000134072	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs2304277	0.34	0.34	0.321	0.352037	0.1789	0.5387	0.2997	0.385	0.3303	0.18	0.53	0.31	0.37	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.691857	NA	NA	NA	NA	NA	0.333	NA	3.8211
1270	4	77022286	77022286	C	G	intronic	ART3	NA	NA	NA	intronic	ENSG00000156219	NA	NA	NA	NA	NA	4q21.1	NA	NA	NA	NA	rs17001385	0.19	0.19	0.154	0.159744	0.1789	0.3522	0.1628	0.0053	0.1483	0.18	0.37	0.18	0.01	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.759122	NA	NA	NA	NA	NA	0.058	NA	3.8211
1270	4	82065566	82065566	A	T	intronic	PRKG2	NA	NA	NA	intronic	ENSG00000138669	NA	NA	NA	NA	NA	4q21.21	NA	NA	NA	NA	rs7687935	0.46	0.46	0.494	0.511382	0.1789	0.5615	0.3213	0.9138	0.3926	0.17	0.53	0.35	0.92	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.098834	NA	NA	NA	NA	NA	0.551	NA	3.8211
1270	6	55805282	55805282	T	G	intergenic	BMP5,COL21A1	dist=64907;dist=116106	NA	NA	ncRNA_exonic	ENSG00000214604	NA	NA	NA	NA	NA	6p12.1	NA	NA	NA	NA	rs12213017	0.18	0.18	0.173	0.181909	0.1789	0.0883	0.1787	0.3101	0.1104	0.18	0.08	0.16	0.3	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.187968	NA	NA	NA	NA	NA	0.123	NA	3.8211
1270	11	101080125	101080125	G	A	intergenic	LOC101054525,TRPC6	dist=50124;dist=242170	NA	NA	ncRNA_exonic	ENSG00000255504	NA	NA	NA	NA	NA	11q22.1	NA	NA	NA	NA	rs11224630	0.08	0.08	NA	0.0806709	0.1789	0.0268	0.1412	0.0061	0.093	0.14	0.02	0.14	0.01	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.081493	NA	NA	NA	NA	NA	NA	NA	3.8211
1270	11	101080126	101080126	A	G	intergenic	LOC101054525,TRPC6	dist=50125;dist=242169	NA	NA	ncRNA_exonic	ENSG00000255504	NA	NA	NA	NA	NA	11q22.1	NA	NA	NA	NA	rs11224631	0.08	0.08	NA	0.0806709	0.1789	0.0268	0.1412	0.0061	0.093	0.14	0.02	0.14	0.01	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.361236	NA	NA	NA	NA	NA	NA	NA	3.8211
1270	11	118239266	118239266	G	A	intronic	UBE4A	NA	NA	NA	intronic	ENSG00000110344	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs2276421	0.26	0.26	0.251	0.297324	0.1789	0.5119	0.1095	0.1611	0.5153	0.19	0.53	0.14	0.14	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.424667	NA	NA	NA	NA	NA	0.203	NA	3.8211
1270	17	65199627	65199627	T	C	intronic	HELZ	NA	NA	NA	intronic	ENSG00000198265	NA	NA	NA	NA	NA	17q24.2	NA	NA	NA	NA	rs1894928	0.2	0.2	0.202	0.210863	0.1789	0.2004	0.1671	0.2988	0.1667	0.18	0.2	0.14	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.812583	NA	NA	NA	NA	NA	0.21	NA	3.8211
1270	22	47062894	47062894	G	T	intronic	GRAMD4	NA	NA	NA	intronic	ENSG00000075240	NA	NA	NA	NA	NA	22q13.31	NA	NA	NA	NA	rs6008947	0.12	0.12	0.125	0.145367	0.1789	0.002	0.1239	0.1982	0.2025	0.18	0.0035	0.14	0.15	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.413742	NA	NA	NA	NA	NA	0.101	NA	3.8211
1270	4	3318413	3318413	A	G	exonic	RGS12	NA	synonymous SNV	RGS12:NM_002926:exon2:c.A516G:p.S172S,RGS12:NM_198229:exon2:c.A516G:p.S172S	exonic	ENSG00000159788	NA	synonymous SNV	ENSG00000159788:ENST00000382788:exon1:c.A516G:p.S172S,ENSG00000159788:ENST00000514268:exon1:c.A516G:p.S172S,ENSG00000159788:ENST00000336727:exon2:c.A516G:p.S172S,ENSG00000159788:ENST00000344733:exon2:c.A516G:p.S172S,ENSG00000159788:ENST00000543385:exon2:c.A516G:p.S172S	NA	NA	4p16.3	NA	NA	NA	NA	rs2236052	0.69	0.69	0.738	0.746006	0.5895	0.6617	0.6383	0.9796	0.7546	0.58	0.65	0.61	0.97	0.6517	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.038144	NA	NA	0.604767	0.910123	NA	0.616	NA	3.8206996
1270	6	31765864	31765864	T	A	intronic	LSM2	NA	NA	NA	intronic	ENSG00000204392	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs1144710	0.11	0.11	NA	0.0519169	0.0915	0.0169	0.0504	0.084	0.0051	0.11	0.02	0.08	0.22	0.0879	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.684088	NA	NA	NA	NA	NA	0.036	NA	3.8206
1270	20	20023174	20023174	C	G	intronic	CRNKL1	NA	NA	NA	intronic	ENSG00000101343	NA	NA	NA	NA	NA	20p11.23	NA	NA	NA	NA	rs3828004	0.21	0.21	0.191	0.198482	0.0278	0.5883	0.1844	0.1157	0.0941	0.03	0.59	0.15	0.11	0.1174	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.425276	NA	NA	0.034302	0.100999	NA	0.123	NA	3.820498
1270	4	106620983	106620983	C	T	intronic	INTS12	NA	NA	NA	intronic	ENSG00000138785	NA	NA	NA	NA	NA	4q24	NA	NA	NA	NA	rs72671820	0.04	0.04	0.035	0.0249601	0.0636	NA	0.0562	0.003	0.0184	0.07	NA	0.07	0.0041	0.0491	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.290934	1.290934	NA	0.06686	0.011126	NA	0.029	NA	3.82044
1270	14	20849854	20849854	G	A	intronic	TEP1	NA	NA	NA	intronic	ENSG00000129566	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs12433941	0.03	0.03	0.032	0.0335463	0.0666	NA	0.0331	0.003	0.0757	0.07	NA	0.03	NA	0.0533	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.222379	NA	NA	0.059884	0.011802	NA	0.007	NA	3.820216
1270	8	145001509	145001509	T	C	intronic	PLEC	NA	NA	NA	intronic	ENSG00000178209	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs11136333	0.25	0.25	0.214	0.230831	0.4274	0.1429	0.2954	0.028	0.3476	0.42	0.16	0.3	0.03	0.3437	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.019386	NA	NA	0.408725	0.090952	NA	0.196	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000078862.3;CLNDSDB=.;CLNDSDBID=.	3.820175
1270	5	78076517	78076517	G	C	intronic	ARSB	NA	NA	NA	intronic	ENSG00000113273	NA	NA	NA	NA	NA	5q14.1	NA	NA	NA	NA	rs3822473	0.1	0.1	0.081	0.109824	0.0517	0.119	0.1686	0.1195	0.1053	0.05	0.1	0.14	0.13	0.0808	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.736458	NA	NA	0.047326	0.107808	NA	0.116	NA	3.820174
1270	2	10135855	10135855	T	C	intronic	GRHL1	NA	NA	NA	intronic	ENSG00000134317	NA	NA	NA	NA	NA	2p25.1	NA	NA	NA	NA	rs11674576	0.2	0.2	0.194	0.221446	0.1799	0.1409	0.2075	0.3449	0.1902	0.17	0.12	0.21	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.81868	NA	NA	NA	NA	NA	0.181	NA	3.8201
1270	6	32975699	32975699	G	C	intronic	HLA-DOA	NA	NA	NA	intronic	ENSG00000204252	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs9276981	0.19	0.19	0.134	0.213658	0.1799	0.2014	0.2277	0.2663	0.18	0.18	0.17	0.2	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.04583	NA	NA	NA	NA	NA	0.116	NA	3.8201
1270	11	48968047	48968047	A	G	intergenic	OR4A47,TRIM49B	dist=456773;dist=85105	NA	NA	ncRNA_intronic	ENSG00000249910	NA	NA	NA	NA	NA	11p11.12	NA	NA	NA	NA	rs1857790	0.22	0.22	0.193	0.270367	0.1799	0.4018	0.2363	0.118	0.4581	0.18	0.36	0.2	0.13	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.938669	NA	NA	NA	NA	NA	0.087	NA	3.8201
1270	11	48999833	48999833	G	A	intergenic	OR4A47,TRIM49B	dist=488559;dist=53319	NA	NA	ncRNA_intronic	ENSG00000220948	NA	NA	NA	NA	NA	11p11.12	NA	NA	NA	NA	rs12576844	0.22	0.22	0.193	0.271965	0.1799	0.4018	0.2363	0.1188	0.4652	0.18	0.36	0.2	0.13	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.964633	NA	NA	NA	NA	NA	0.109	NA	3.8201
1270	19	41331149	41331149	C	T	intergenic	RAB4B-EGLN2,CYP2A6	dist=16803;dist=18294	NA	NA	ncRNA_exonic	ENSG00000237118	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs56043834	0.08	0.08	0.076	0.0573083	0.1799	0.001	0.0965	0.0076	0.0286	0.19	NA	0.09	0.01	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.792738	NA	NA	NA	NA	NA	0.058	NA	3.8201
1270	19	53015987	53015987	C	G	UTR3	ZNF578	NM_001099694:c.*580C>G	NA	NA	upstream;downstream	ENSG00000269349;ENSG00000258405	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs7259769	0.26	0.26	0.199	0.278954	0.1799	0.5179	0.3401	0.1203	0.3057	0.17	0.5	0.28	0.08	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.813492	NA	NA	NA	NA	NA	0.174	NA	3.8201
1270	8	52233310	52233310	T	G	intronic	PXDNL	NA	NA	NA	ncRNA_exonic	ENSG00000253664	NA	NA	NA	NA	NA	8q11.22	NA	NA	NA	NA	rs2304552	0.27	0.27	NA	0.321086	0.2386	0.1429	0.2291	0.6346	0.2311	0.21	0.13	0.24	0.55	0.2486	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.947877	NA	NA	0.026129	0.131452	NA	NA	NA	3.8200043
1270	15	54847724	54847724	G	A	intronic	UNC13C	NA	NA	NA	intronic	ENSG00000137766	NA	NA	NA	NA	NA	15q21.3	NA	NA	NA	NA	rs62022211	0.06	0.06	0.031	0.0589058	0.0567	0.0228	0.1801	0.0287	0.0532	0.06	0.02	0.13	0.03	0.071	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0225	NA	NA	0.052382	0.040084	NA	NA	NA	3.819918
1270	6	151785551	151785551	A	G	intronic	C6orf211	NA	NA	NA	intronic	ENSG00000146476	NA	NA	NA	NA	NA	6q25.1	NA	NA	NA	NA	rs17081270	0.1	0.1	0.106	0.113019	0.0507	0.1577	0.0447	0.1861	0.0808	0.05	0.14	0.04	0.16	0.0777	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.863672	NA	NA	0.052154	0.140618	NA	0.101	NA	3.819446
1270	22	50900951	50900951	T	C	intronic	SBF1	NA	NA	NA	intronic	ENSG00000100241	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs116404506	0.08	0.08	0.074	0.0910543	0.0676	0.0228	0.0403	0.2231	0.0429	0.06	0.02	0.04	0.18	0.0665	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.363108	NA	NA	0.046561	0.152847	NA	0.051	NA	3.819339
1270	1	29616318	29616318	C	A	intronic	PTPRU	NA	NA	NA	intronic	ENSG00000060656	NA	NA	NA	NA	NA	1p35.3	NA	NA	NA	NA	rs2076620	0.14	0.14	0.125	0.141973	0.1809	0.1627	0.1902	0.0719	0.1411	0.18	0.15	0.18	0.06	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.158849	NA	NA	NA	NA	NA	0.145	NA	3.8191
1270	6	30138853	30138853	C	A	intronic	TRIM15	NA	NA	NA	intronic	ENSG00000204610	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs41272591	0.18	0.18	0.15	0.173323	0.1809	0.3552	0.1023	0.0136	0.2444	0.19	0.34	0.12	0.02	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.236716	1.236716	NA	NA	NA	NA	0.268	NA	3.8191
1270	9	112642756	112642756	G	T	intronic	PALM2,PALM2-AKAP2	NA	NA	NA	intronic	ENSG00000157654,ENSG00000241978,ENSG00000243444	NA	NA	NA	NA	NA	9q31.3	NA	NA	NA	NA	rs10816904	0.26	0.26	0.279	0.317492	0.1809	0.2589	0.1715	0.441	0.455	0.19	0.24	0.17	0.45	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.08303	NA	NA	NA	NA	NA	0.261	NA	3.8191
1270	13	23708423	23708423	G	A	intergenic	BASP1P1,SGCG	dist=236103;dist=46637	NA	NA	ncRNA_exonic	ENSG00000233440	NA	NA	NA	NA	NA	13q12.12	NA	NA	NA	NA	rs9510591	0.13	0.13	0.118	0.112819	0.1809	0.0734	0.1138	0.1135	0.0818	0.18	0.08	0.15	0.11	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.428424	NA	NA	NA	NA	NA	0.225	NA	3.8191
1270	14	32711695	32711695	T	G	intergenic	ARHGAP5,AKAP6	dist=82761;dist=86784	NA	NA	ncRNA_exonic	ENSG00000258619	NA	NA	NA	NA	NA	14q12	NA	NA	NA	NA	rs12433700	0.23	0.23	0.214	0.241214	0.1809	0.2133	0.3905	0.292	0.1575	0.18	0.19	0.32	0.29	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.218798	NA	NA	NA	NA	NA	0.152	NA	3.8191
1270	19	50510678	50510678	A	G	intronic	VRK3	NA	NA	NA	intronic	ENSG00000105053	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs7249316	0.27	0.27	0.291	0.254193	0.1809	0.3403	0.1744	0.3782	0.1299	0.19	0.33	0.2	0.38	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.719401	NA	NA	NA	NA	NA	0.232	NA	3.8191
1270	19	53819176	53819176	C	T	intergenic	BIRC8,ZNF845	dist=24301;dist=17826	NA	NA	ncRNA_exonic	ENSG00000174677	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs11880867	0.17	0.17	0.143	0.161542	0.1809	0.1587	0.1599	0.1974	0.0971	0.17	0.18	0.14	0.19	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.218953	NA	NA	NA	NA	NA	0.087	NA	3.8191
1270	19	14575010	14575010	G	A	intronic	PKN1	NA	NA	NA	intronic	ENSG00000123143	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs34819734	0.06	0.06	0.043	0.0601038	0.0636	0.0317	0.1182	0.0598	0.045	0.05	0.03	0.11	0.05	0.0621	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.195392	NA	NA	0.055287	0.060528	NA	0.08	NA	3.819013
1270	21	15535889	15535889	A	G	intronic	LIPI	NA	NA	NA	intronic	ENSG00000188992	NA	NA	NA	NA	NA	21q11.2	NA	NA	NA	NA	rs73346033	0.12	0.12	0.12	0.127995	0.0517	0.2232	0.098	0.1717	0.0706	0.05	0.22	0.08	0.16	0.0776	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.127193	NA	NA	0.052154	0.143085	NA	0.101	NA	3.818546
1270	7	138732274	138732274	C	G	UTR3	ZC3HAV1	NM_020119:c.*66G>C	NA	NA	UTR3	ENSG00000105939	ENST00000242351:c.*66G>C,ENST00000464606:c.*66G>C	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs3087999	0.5	0.5	0.517	0.53135	0.5149	0.3611	0.3775	0.7141	0.5859	0.5	0.37	0.42	0.73	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.561893	NA	NA	NA	NA	NA	0.5	NA	3.8184334
1270	1	209778771	209778771	G	C	intronic	CAMK1G	NA	NA	NA	intronic	ENSG00000008118	NA	NA	NA	NA	NA	1q32.2	NA	NA	NA	NA	rs35508847	0.18	0.18	0.162	0.183906	0.1819	0.12	0.2003	0.3169	0.0603	0.17	0.12	0.14	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.705802	NA	NA	NA	NA	NA	0.109	NA	3.8181
1270	1	209779126	209779126	C	A	intronic	CAMK1G	NA	NA	NA	intronic	ENSG00000008118	NA	NA	NA	NA	NA	1q32.2	NA	NA	NA	NA	rs11119313	0.18	0.18	0.182	0.187101	0.1819	0.12	0.2032	0.3275	0.0603	0.17	0.12	0.14	0.31	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.372258	NA	NA	NA	NA	NA	0.109	NA	3.8181
1270	1	209779137	209779137	C	T	intronic	CAMK1G	NA	NA	NA	intronic	ENSG00000008118	NA	NA	NA	NA	NA	1q32.2	NA	NA	NA	NA	rs2235449	0.18	0.18	0.178	0.187101	0.1819	0.12	0.2032	0.3275	0.0603	0.17	0.12	0.14	0.31	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.036652	NA	NA	NA	NA	NA	0.109	NA	3.8181
1270	2	20233929	20233929	C	T	intronic	LAPTM4A	NA	NA	NA	intronic	ENSG00000068697	NA	NA	NA	NA	NA	2p24.1	NA	NA	NA	NA	rs936509	0.3	0.3	0.306	0.342053	0.1819	0.4782	0.1715	0.3472	0.4806	0.18	0.48	0.16	0.35	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.547923	NA	NA	NA	NA	NA	0.239	NA	3.8181
1270	2	29754721	29754721	T	C	intronic	ALK	NA	NA	NA	intronic	ENSG00000171094	NA	NA	NA	NA	NA	2p23.2	NA	NA	NA	NA	rs11689790	0.09	0.09	0.085	0.0644968	0.1819	0.001	0.0821	0.0401	0.0297	0.18	0.0017	0.09	0.04	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.901136	NA	NA	NA	NA	NA	0.196	NA	3.8181
1270	5	137034169	137034169	C	T	intronic	KLHL3	NA	NA	NA	intronic	ENSG00000146021	NA	NA	NA	NA	NA	5q31.2	NA	NA	NA	NA	rs41298968	0.11	0.11	0.096	0.116214	0.1819	0.0238	0.1311	0.0628	0.2055	0.18	0.03	0.16	0.07	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.588878	NA	NA	NA	NA	NA	0.188	NA	3.8181
1270	5	167992937	167992937	A	G	intronic	PANK3	NA	NA	NA	intronic	ENSG00000120137	NA	NA	NA	NA	NA	5q34	NA	NA	NA	NA	rs34178624	0.11	0.11	0.107	0.0792732	0.1819	0.0853	0.0937	0.0091	0.0521	0.18	0.1	0.1	0.02	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.501542	NA	NA	NA	NA	NA	0.051	NA	3.8181
1270	11	6532778	6532778	A	T	intronic	DNHD1	NA	NA	NA	intronic	ENSG00000179532	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs17244263	0.13	0.13	0.129	0.139776	0.1819	0.0298	0.1614	0.1256	0.2137	0.18	0.04	0.14	0.14	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.237561	NA	NA	NA	NA	NA	0.225	NA	3.8181
1270	12	6562538	6562538	C	T	intronic	TAPBPL	NA	NA	NA	intronic	ENSG00000139192	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs2041386	0.1	0.1	0.069	0.0976438	0.1819	0.0109	0.1196	0.0076	0.2065	0.19	0.01	0.16	0.01	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.531576	NA	NA	NA	NA	NA	0.072	NA	3.8181
1270	12	63052559	63052559	A	T	intronic	PPM1H	NA	NA	NA	intronic	ENSG00000111110	NA	NA	NA	NA	NA	12q14.1	NA	NA	NA	NA	rs11174587	0.1	0.1	0.084	0.0816693	0.1819	0.0149	0.1095	0.0378	0.0869	0.18	0.01	0.12	0.07	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.102564	NA	NA	NA	NA	NA	0.152	NA	3.8181
1270	15	42127918	42127918	A	G	intronic	JMJD7,JMJD7-PLA2G4B	NA	NA	NA	intronic	ENSG00000168970,ENSG00000243789	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs11070350	0.21	0.21	0.232	0.222843	0.1819	0.122	0.1744	0.3593	0.2188	0.18	0.13	0.19	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.445353	NA	NA	NA	NA	NA	0.297	NA	3.8181
1270	16	74877125	74877125	G	A	intergenic	FA2H,WDR59	dist=68396;dist=30346	NA	NA	ncRNA_exonic	ENSG00000261458	NA	NA	NA	NA	NA	16q23.1	NA	NA	NA	NA	rs9930887	0.33	0.33	0.314	0.370807	0.1819	0.5496	0.4323	0.3238	0.4008	0.19	0.57	0.33	0.29	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.183391	NA	NA	NA	NA	NA	0.275	NA	3.8181
1270	20	44352740	44352740	G	A	intronic	SPINT4	NA	NA	NA	intronic	ENSG00000149651	NA	NA	NA	Score=243;Name=lod=13	NA	20q13.12	NA	NA	NA	NA	rs1487317	0.47	0.47	0.478	0.519768	0.3857	0.4742	0.3199	0.7231	0.5716	0.36	0.48	0.35	0.74	0.426	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.266594	2.266594	NA	0.37034	0.650682	NA	0.449	NA	3.81796
1270	2	136575199	136575199	G	T	exonic	LCT	NA	synonymous SNV	LCT:NM_002299:exon6:c.C1419A:p.G473G	exonic	ENSG00000115850	NA	synonymous SNV	ENSG00000115850:ENST00000264162:exon6:c.C1419A:p.G473G	NA	NA	2q21.3	NA	NA	NA	NA	rs6719488	0.42	0.42	0.377	0.35603	0.5954	0.3998	0.4323	0.1195	0.3303	0.6	0.41	0.46	0.11	0.5559	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.245934	NA	NA	0.697442	0.236042	NA	0.464	NA	3.8179246
1270	5	149447771	149447771	G	A	intronic	CSF1R	NA	NA	NA	intronic	ENSG00000182578	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs34928010	0.15	0.15	0.157	0.178914	0.0338	0.1855	0.2003	0.3011	0.1411	0.03	0.16	0.18	0.28	0.109	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.601711	1.601711	NA	0.039419	0.259192	NA	0.181	NA	3.817781
1270	5	52382925	52382925	C	T	intronic	ITGA2	NA	NA	NA	intronic	ENSG00000164171	NA	NA	NA	NA	NA	5q11.2	NA	NA	NA	NA	rs2303120	0.11	0.11	0.107	0.104233	0.0885	0.0298	0.0677	0.2035	0.089	0.09	0.03	0.06	0.26	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.033111	NA	NA	0.093966	0.174133	NA	0.109	NA	3.817534
1270	7	102614137	102614137	C	A	intronic	FBXL13	NA	NA	NA	ncRNA_exonic	ENSG00000230257	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs6465886	0.18	0.18	0.201	0.163538	0.1819	0.1657	0.1326	0.2148	0.0951	0.2	0.15	0.16	0.2	0.1602	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.31909	NA	NA	0.173871	0.213795	NA	0.159	NA	3.8173623
1270	19	50368361	50368361	T	A	intronic	PNKP	NA	NA	NA	intronic	ENSG00000039650	NA	NA	NA	NA	NA	19q13.33	NA	NA	Name=2	NA	rs1290649	0.34	0.34	0.317	0.375399	0.4056	0.2163	0.2752	0.4266	0.5102	0.4	0.2	0.33	0.4	0.3871	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.349475	NA	NA	0.390073	0.397153	NA	0.283	NA	3.817227
1270	1	94474185	94474185	A	C	intronic	ABCA4	NA	NA	NA	intronic	ENSG00000198691	NA	NA	NA	NA	NA	1p22.1	NA	NA	NA	NA	rs2275032	0.19	0.19	0.18	0.177516	0.1829	0.121	0.1758	0.264	0.1145	0.17	0.16	0.19	0.25	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.325675	NA	NA	NA	NA	NA	0.188	NA	3.8171
1270	1	95332814	95332814	C	T	intronic	SLC44A3	NA	NA	NA	intronic	ENSG00000143036	NA	NA	NA	NA	NA	1p21.3	NA	NA	NA	NA	rs74104711	0.22	0.22	0.224	0.243411	0.1829	0.2192	0.2622	0.2829	0.2638	0.2	0.19	0.22	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.910596	NA	NA	NA	NA	ID=COSN163164;OCCURENCE=1(breast)	0.188	NA	3.8171
1270	1	109813719	109813719	C	T	intronic	CELSR2	NA	NA	NA	intronic	ENSG00000143126	NA	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	rs17035665	0.15	0.15	0.169	0.161142	0.1829	0.0556	0.0965	0.2247	0.2076	0.18	0.06	0.11	0.24	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.06752	NA	NA	NA	NA	NA	0.239	NA	3.8171
1270	7	100482720	100482720	G	A	intronic	SRRT	NA	NA	NA	intronic	ENSG00000087087	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs3757868	0.11	0.11	0.084	0.0884585	0.1829	0.0308	0.1023	0.0416	0.1043	0.2	0.03	0.12	0.04	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.324332	NA	NA	NA	NA	NA	0.109	NA	3.8171
1270	14	51381950	51381950	T	A	intronic	PYGL	NA	NA	NA	intronic	ENSG00000100504	NA	NA	NA	NA	NA	14q22.1	NA	NA	NA	NA	rs2075646	0.25	0.25	0.217	0.235423	0.1829	0.4365	0.3545	0.0408	0.2607	0.19	0.44	0.34	0.06	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.791803	NA	NA	NA	NA	NA	0.159	NA	3.8171
1270	15	90333851	90333851	G	A	intronic	ANPEP	NA	NA	NA	intronic	ENSG00000166825	NA	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs17239917	0.1	0.1	0.102	0.0992412	0.1829	0.001	0.0937	0.0825	0.1411	0.19	0.0035	0.09	0.07	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.090807	NA	NA	NA	NA	NA	0.13	NA	3.8171
1270	17	39484556	39484556	G	T	intergenic	KRTAP17-1,KRT33A	dist=12609;dist=17789	NA	NA	ncRNA_exonic	ENSG00000233014	NA	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs28615092	0.22	0.22	0.224	0.213259	0.1829	0.3175	0.1383	0.2269	0.1718	0.18	0.31	0.15	0.24	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.008939	NA	NA	NA	NA	NA	0.181	NA	3.8171
1270	17	39580130	39580130	G	A	intronic	KRT37	NA	NA	NA	ncRNA_exonic	ENSG00000234859	NA	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs78139770	0.17	0.17	0.16	0.172324	0.1759	0.3224	0.1268	0.034	0.2331	0.18	0.31	0.13	0.04	0.1634	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.650108	NA	NA	0.176977	0.055606	NA	0.109	NA	3.8170563
1270	16	3142009	3142009	C	T	intronic	ZSCAN10	NA	NA	NA	intronic	ENSG00000130182	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs72772563	0.07	0.07	0.071	0.0555112	0.0567	0.131	0.049	0.0068	0.047	0.06	0.15	0.06	0.01	0.0663	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.49337	NA	NA	0.060405	0.020482	NA	0.043	NA	3.816595
1270	19	44423981	44423981	T	C	intronic	ZNF45	NA	NA	NA	ncRNA_intronic	ENSG00000267191	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs384329	0.57	0.57	0.553	0.528554	0.5169	0.7996	0.6499	0.3343	0.4376	0.51	0.82	0.58	0.38	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.042729	NA	NA	NA	NA	NA	0.5	NA	3.8164333
1270	6	36944902	36944902	T	C	intronic	MTCH1	NA	NA	NA	intronic	ENSG00000137409	NA	NA	NA	NA	NA	6p21.2	NA	NA	NA	NA	rs9296205	0.1	0.1	0.082	0.118411	0.0895	0.0317	0.1124	0.1679	0.1748	0.08	0.04	0.11	0.19	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.044474	NA	NA	0.09428	0.156792	NA	0.138	NA	3.81622
1270	1	171509014	171509014	T	C	intronic	PRRC2C	NA	NA	NA	intronic	ENSG00000117523	NA	NA	NA	NA	NA	1q24.3	NA	NA	NA	NA	rs12734261	0.12	0.12	0.123	0.133586	0.1839	0.0625	0.1182	0.1301	0.1708	0.19	0.04	0.13	0.12	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.370917	NA	NA	NA	NA	NA	0.094	NA	3.8161
1270	3	37583851	37583851	A	C	intronic	ITGA9	NA	NA	NA	intronic	ENSG00000144668	NA	NA	NA	NA	NA	3p22.2	NA	NA	NA	NA	rs2844349	0.12	0.12	0.118	0.0978435	0.1839	0.0823	0.085	0.0159	0.1452	0.19	0.1	0.11	0.02	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.053759	NA	NA	NA	NA	NA	0.181	NA	3.8161
1270	4	16590223	16590223	G	C	intronic	LDB2	NA	NA	NA	intronic	ENSG00000169744	NA	NA	NA	NA	NA	4p15.32	NA	NA	NA	NA	rs906122	0.3	0.3	0.289	0.291134	0.1839	0.4306	0.3228	0.2625	0.274	0.19	0.46	0.3	0.27	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.727705	NA	NA	NA	NA	NA	0.225	NA	3.8161
1270	4	129770068	129770068	C	T	intronic	PHF17	NA	NA	NA	intronic	ENSG00000077684	NA	NA	NA	NA	NA	4q28.2	NA	NA	NA	NA	rs11098988	0.15	0.15	0.127	0.159145	0.1839	0.0933	0.1772	0.1233	0.2372	0.19	0.1	0.2	0.13	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.832027	NA	NA	NA	NA	NA	0.109	NA	3.8161
1270	9	100353801	100353801	G	T	intronic	TMOD1	NA	NA	NA	intronic	ENSG00000136842	NA	NA	NA	NA	NA	9q22.33	NA	NA	NA	NA	rs2805792	0.19	0.19	0.198	0.215056	0.1839	0.0556	0.1888	0.4009	0.1789	0.18	0.03	0.16	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.821737	NA	NA	NA	NA	NA	0.167	NA	3.8161
1270	16	57111364	57111364	G	C	intronic	NLRC5	NA	NA	NA	intronic	ENSG00000140853	NA	NA	NA	NA	NA	16q13	NA	NA	NA	NA	rs34702866	0.26	0.26	0.237	0.281749	0.1839	0.369	0.2781	0.2784	0.2996	0.18	0.35	0.25	0.27	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.675737	1.675737	NA	NA	NA	NA	0.21	NA	3.8161
1270	20	25434351	25434351	A	G	intronic	NINL	NA	NA	NA	intronic	ENSG00000101004	NA	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	rs2072975	0.2	0.2	0.186	0.167133	0.1839	0.3552	0.134	0.0643	0.1186	0.19	0.35	0.16	0.07	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.732453	NA	NA	NA	NA	NA	0.109	NA	3.8161
1270	10	55591313	55591313	G	A	intronic	PCDH15	NA	NA	NA	intronic	ENSG00000150275	NA	NA	NA	NA	NA	10q21.1	NA	NA	NA	NA	rs7089209	0.46	0.46	0.438	0.440296	0.3678	0.7232	0.4236	0.2474	0.4959	0.36	0.77	0.38	0.3	0.4331	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.857265	NA	NA	0.383023	0.29337	NA	0.283	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000039735.1;CLNDSDB=.;CLNDSDBID=.	3.816077
1270	17	18863979	18863979	G	C	intronic	SLC5A10	NA	NA	NA	intronic	ENSG00000154025	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs2074274	0.17	0.17	0.161	0.242212	0.0338	0.0992	0.0821	0.5507	0.3006	0.02	0.11	0.09	0.51	0.1125	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.645791	NA	NA	0.037674	0.461189	NA	0.21	NA	3.816026
1270	17	61565998	61565998	A	C	intronic	ACE	NA	NA	NA	UTR3	ENSG00000159640	ENST00000579314:c.*24A>C,ENST00000579204:c.*443A>C	NA	NA	NA	NA	17q23.3	NA	Name=SRF	NA	NA	rs4342	0.52	0.52	0.423	0.529952	0.4254	0.6746	0.5692	0.413	0.6186	0.43	0.69	0.56	0.43	0.4996	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.919466	NA	NA	0.426047	0.396959	NA	0.507	NA	3.8156197
1270	2	74758934	74758934	G	A	intronic	HTRA2	NA	NA	NA	intronic	ENSG00000115317	NA	NA	NA	NA	NA	2p13.1	NA	NA	NA	NA	rs2241028	0.08	0.08	0.075	0.0682907	0.0666	0.1478	0.0519	0.0076	0.0818	0.07	0.16	0.05	0.01	0.0619	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.158596	NA	NA	0.056047	0.01566	NA	0.036	NA	3.815453
1270	8	87517201	87517201	A	G	intronic	RMDN1	NA	NA	NA	ncRNA_exonic	ENSG00000254088	NA	NA	NA	NA	NA	8q21.3	NA	NA	NA	NA	rs7463186	0.52	0.52	0.485	0.515575	0.5179	0.5823	0.6455	0.3616	0.5603	0.53	0.59	0.63	0.36	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.191292	NA	NA	NA	NA	NA	0.391	NA	3.8154333
1270	1	2234903	2234903	C	T	intronic	SKI	NA	NA	NA	intronic	ENSG00000157933	NA	NA	NA	NA	NA	1p36.33	NA	NA	NA	NA	rs2256178	0.24	0.24	0.231	0.269169	0.1849	0.3026	0.3429	0.2277	0.3252	0.18	0.29	0.32	0.22	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.204957	NA	NA	NA	NA	NA	0.29	NA	3.8151
1270	12	104032074	104032074	A	G	intronic	STAB2	NA	NA	NA	intronic	ENSG00000136011	NA	NA	NA	NA	NA	12q23.3	NA	NA	NA	NA	rs1582876	0.21	0.21	0.192	0.241014	0.1849	0.2956	0.2061	0.1074	0.4479	0.19	0.31	0.2	0.11	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.728726	NA	NA	NA	NA	NA	0.145	NA	3.8151
1270	14	24771080	24771080	T	C	intronic	NOP9	NA	NA	NA	intronic	ENSG00000196943	NA	NA	NA	NA	NA	14q12	NA	NA	NA	NA	rs4374085	0.16	0.16	0.142	0.157947	0.1849	0.004	0.3487	0.1861	0.1155	0.2	0.01	0.3	0.18	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.236262	NA	NA	NA	NA	NA	0.159	NA	3.8151
1270	14	24771101	24771101	C	T	intronic	NOP9	NA	NA	NA	intronic	ENSG00000196943	NA	NA	NA	NA	NA	14q12	NA	NA	NA	NA	rs4366641	0.15	0.15	0.133	0.150359	0.1849	0.004	0.3473	0.1581	0.1155	0.2	0.01	0.3	0.15	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.37345	NA	NA	NA	NA	NA	0.13	NA	3.8151
1270	15	91194691	91194691	C	T	intergenic	CRTC3,BLM	dist=6114;dist=65888	NA	NA	ncRNA_intronic	ENSG00000259736	NA	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs35907368	0.15	0.15	0.146	0.165136	0.1849	0.1974	0.1052	0.1551	0.1677	0.18	0.13	0.11	0.15	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.03305	NA	NA	NA	NA	NA	0.058	NA	3.8151
1270	19	10084124	10084124	C	T	intronic	COL5A3	NA	NA	NA	intronic	ENSG00000080573	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs73003459	0.15	0.15	0.152	0.124002	0.1849	0.2202	0.121	0.0068	0.1227	0.18	0.25	0.14	0.01	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.827413	NA	NA	NA	NA	NA	0.13	NA	3.8151
1270	19	35452045	35452045	A	C	intronic	ZNF792	NA	NA	NA	intronic	ENSG00000180884	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs2546026	0.2	0.2	0.199	0.206669	0.1849	0.1577	0.0821	0.3268	0.2055	0.18	0.17	0.1	0.32	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.466422	NA	NA	NA	NA	NA	0.159	NA	3.8151
1270	20	25257215	25257215	G	A	intronic	PYGB	NA	NA	NA	intronic	ENSG00000100994	NA	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	rs2254046	0.2	0.2	0.186	0.165935	0.1849	0.3552	0.1354	0.0658	0.1084	0.19	0.35	0.16	0.08	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.619413	NA	NA	NA	NA	NA	0.08	NA	3.8151
1270	19	9027313	9027313	A	G	intronic	MUC16	NA	NA	NA	intronic	ENSG00000181143	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs62118276	0.04	0.04	0.021	0.0489217	0.0606	0.005	0.072	0.0166	0.1094	0.06	0.0035	0.08	0.01	0.066	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.013427	NA	NA	0.058363	0.018337	NA	0.022	NA	3.815037
1270	11	102398436	102398436	C	T	intronic	MMP7	NA	NA	NA	intronic	ENSG00000137673	NA	NA	NA	NA	NA	11q22.2	NA	NA	NA	NA	rs78978042	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.185	0.098	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.607035	NA	NA	NA	NA	NA	0.145	NA	3.815
1271	12	50535955	50535955	C	T	intronic	CERS5	NA	NA	NA	ncRNA_intronic	ENSG00000272368	NA	NA	NA	NA	NA	12q13.12	NA	NA	NA	NA	rs10747571	0.38	0.38	0.372	0.377196	0.2525	0.7242	0.3963	0.2065	0.365	0.26	0.71	0.34	0.21	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.058938	NA	NA	0.265871	0.21026	NA	0.254	NA	3.8149623
1271	1	12016957	12016957	T	G	intronic	PLOD1	NA	NA	NA	intronic	ENSG00000083444	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs41307745	0.07	0.07	0.065	0.076877	0.0606	0.1587	0.0317	0.0038	0.1401	0.07	0.15	0.04	0.01	0.0708	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.808068	NA	NA	0.05407	0.009986	NA	0.036	NA	3.81453
1271	19	10096616	10096616	G	C	intronic	COL5A3	NA	NA	NA	intronic	ENSG00000080573	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs28539329	0.07	0.07	0.066	0.081869	0.0606	0.0159	0.0908	0.1649	0.0532	0.06	0.02	0.08	0.15	0.0685	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.921575	2.921575	NA	0.056395	0.144349	NA	0.138	NA	3.814505
1271	4	48854139	48854139	T	C	intronic	OCIAD1	NA	NA	NA	ncRNA_exonic	ENSG00000248256	NA	NA	NA	NA	NA	4p11	NA	NA	NA	NA	rs2572345	0.46	0.46	0.423	0.401158	0.5189	0.4613	0.6282	0.1641	0.3773	0.52	0.5	0.67	0.18	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.334133	1.334133	NA	NA	NA	NA	0.312	NA	3.8144333
1271	1	120384205	120384205	A	G	exonic	NBPF7	NA	synonymous SNV	NBPF7:NM_001047980:exon3:c.T357C:p.V119V	ncRNA_exonic	ENSG00000215864	NA	NA	NA	NA	NA	1p12	NA	NA	Name=8	NA	rs2994820	0.6	0.6	0.61	0.625	0.8121	0.4673	0.7118	0.3979	0.8405	0.77	0.5	0.72	0.38	0.7496	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.049979	NA	NA	0.7906	0.453019	NA	0.101	NA	3.8143666
1271	3	42771791	42771791	C	T	intronic	CCDC13	NA	NA	NA	intronic	ENSG00000244607	NA	NA	NA	NA	NA	3p22.1	NA	NA	NA	NA	rs13085272	0.18	0.18	0.196	0.184305	0.1859	0.1081	0.1744	0.1747	0.2812	0.19	0.12	0.19	0.23	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.9032	NA	NA	NA	NA	NA	0.196	NA	3.8141
1271	6	33658552	33658552	C	A	intronic	ITPR3	NA	NA	NA	intronic	ENSG00000096433	NA	NA	NA	NA	NA	6p21.31	NA	NA	NA	NA	rs34778247	0.1	0.1	0.091	0.071885	0.1859	0.0169	0.1225	0.0129	0.0552	0.19	0.02	0.12	0.02	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.678182	NA	NA	NA	NA	NA	0.08	NA	3.8141
1271	6	33696131	33696131	C	T	intronic	IP6K3	NA	NA	NA	intronic	ENSG00000161896	NA	NA	NA	NA	NA	6p21.31	NA	NA	NA	NA	rs13204162	0.11	0.11	0.103	0.0832668	0.1859	0.0496	0.1455	0.0129	0.0634	0.19	0.06	0.12	0.02	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.290494	NA	NA	NA	NA	NA	0.08	NA	3.8141
1271	7	909252	909252	G	A	intronic	SUN1	NA	NA	NA	intronic	ENSG00000164828	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs74714510	0.17	0.17	0.144	0.173522	0.1859	0.1369	0.2392	0.0961	0.2566	0.18	0.16	0.24	0.1	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.123833	NA	NA	NA	NA	NA	0.13	NA	3.8141
1271	9	72082970	72082970	C	A	intronic	APBA1	NA	NA	NA	intronic	ENSG00000107282	NA	NA	NA	NA	NA	9q21.11	NA	NA	NA	NA	rs10867613	0.16	0.16	0.146	0.169129	0.1859	0.0982	0.2522	0.149	0.1933	0.19	0.08	0.27	0.12	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.364289	NA	NA	NA	NA	NA	0.109	NA	3.8141
1271	10	13248028	13248028	T	G	intronic	MCM10	NA	NA	NA	intronic	ENSG00000065328	NA	NA	NA	NA	NA	10p13	NA	NA	NA	NA	rs3802574	0.22	0.22	0.19	0.217053	0.1859	0.3085	0.2334	0.1921	0.1769	0.2	0.3	0.2	0.17	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.282014	NA	NA	NA	NA	NA	0.159	NA	3.8141
1271	11	6478384	6478384	C	T	intronic	TRIM3	NA	NA	NA	intronic	ENSG00000110171	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs11605141	0.16	0.16	0.175	0.188099	0.1859	0.0188	0.1772	0.298	0.2239	0.19	0.02	0.15	0.3	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.001357	NA	NA	NA	NA	NA	0.297	NA	3.8141
1271	11	105732687	105732687	C	T	intronic	GRIA4	NA	NA	NA	intronic	ENSG00000152578	NA	NA	NA	NA	NA	11q22.3	NA	NA	NA	NA	rs2277280	0.27	0.27	0.27	0.280751	0.1859	0.1458	0.3242	0.5651	0.1022	0.18	0.13	0.31	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.778823	1.778823	NA	NA	NA	NA	0.283	NA	3.8141
1271	12	50385663	50385663	T	C	intronic	RACGAP1	NA	NA	NA	intronic	ENSG00000161800	NA	NA	NA	NA	NA	12q13.12	NA	NA	NA	NA	rs7136233	0.13	0.13	0.106	0.113618	0.1859	0.131	0.1801	0.0121	0.1115	0.18	0.12	0.18	0.02	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.250252	NA	NA	NA	NA	NA	0.101	NA	3.8141
1271	15	32912511	32912511	C	A	intronic	ARHGAP11A	NA	NA	NA	intronic	ENSG00000198826	NA	NA	NA	NA	NA	15q13.3	NA	NA	NA	NA	rs62001760	0.22	0.22	0.105	0.186302	0.1859	0.3224	0.1326	0.0083	0.3252	0.25	0.4	0.15	0.02	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.067533	NA	NA	NA	NA	NA	0.014	NA	3.8141
1271	20	25271033	25271033	C	G	intronic	PYGB	NA	NA	NA	intronic	ENSG00000100994	NA	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	rs2258053	0.2	0.2	0.15	0.164137	0.1859	0.3522	0.1297	0.0522	0.1237	0.19	0.35	0.16	0.06	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.244864	NA	NA	NA	NA	NA	0.094	NA	3.8141
1271	22	18910545	18910545	C	T	intronic	PRODH	NA	NA	NA	intronic	ENSG00000100033	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs2277834	0.25	0.25	0.261	0.238618	0.1859	0.1855	0.2853	0.3994	0.0971	0.18	0.2	0.28	0.42	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.686902	NA	NA	NA	NA	NA	0.297	NA	3.8141
1271	5	79086903	79086903	G	A	intronic	CMYA5	NA	NA	NA	ncRNA_intronic	ENSG00000250258	NA	NA	NA	NA	NA	5q14.1	NA	NA	NA	NA	rs10052867	0.15	0.15	0.147	0.171925	0.173	0.0228	0.1455	0.2769	0.2014	0.17	0.02	0.16	0.27	0.1794	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.08052	NA	NA	0.167102	0.249636	ID=COSN167507;OCCURENCE=1(large_intestine)	0.159	NA	3.8138313
1271	2	16734295	16734295	A	G	intronic	FAM49A	NA	NA	NA	intronic	ENSG00000197872	NA	NA	NA	NA	NA	2p24.2	NA	NA	NA	NA	rs114377299	0.04	0.04	0.04	0.0313498	0.0696	NA	0.0447	0.0189	0.0317	0.06	NA	0.05	0.04	0.0482	0.068	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.205167	2.205167	NA	0.068372	0.03064	NA	0.036	NA	3.813828
1271	10	97165811	97165811	G	A	intronic	SORBS1	NA	NA	NA	intronic	ENSG00000095637	NA	NA	NA	NA	NA	10q24.1	NA	NA	NA	NA	rs3818540	0.22	0.22	0.214	0.230232	0.1004	0.4216	0.134	0.2655	0.1871	0.1	0.43	0.14	0.22	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.543862	NA	NA	0.085795	0.217486	NA	0.275	NA	3.813805
1271	8	145008931	145008931	G	C	intronic	PLEC	NA	NA	NA	intronic	ENSG00000178209	NA	NA	NA	NA	NA	8q24.3	NA	NA	Name=3	NA	rs6994460	0.38	0.38	0.419	0.393371	0.4115	0.1389	0.3271	0.6467	0.3415	0.4	0.15	0.33	0.66	0.3805	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.176081	NA	NA	0.394351	0.601338	NA	0.478	NA	3.813649
1271	20	44472163	44472163	C	T	intronic	ACOT8	NA	NA	NA	intronic	ENSG00000101473	NA	NA	NA	Score=608;Name=lod=395	NA	20q13.12	NA	NA	NA	NA	rs55931834	0.2	0.2	0.185	0.171126	0.4274	0.002	0.2378	0.0507	0.1973	0.43	NA	0.25	0.05	0.3405	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.304436	1.304436	NA	0.418488	0.120517	NA	0.239	NA	3.813612
1271	12	88582603	88582603	T	G	intronic	TMTC3	NA	NA	NA	intronic	ENSG00000139324	NA	NA	NA	NA	NA	12q21.32	NA	NA	NA	NA	rs12296370	0.11	0.11	0.117	0.126398	0.0537	0.0089	0.0735	0.3253	0.091	0.06	0.0035	0.08	0.33	0.0763	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.021062	NA	NA	0.056593	0.284158	NA	0.181	NA	3.813407
1271	13	99091147	99091147	G	A	intronic	FARP1	NA	NA	NA	intronic	ENSG00000152767	NA	NA	NA	NA	NA	13q32.2	NA	NA	NA	NA	rs7984446	0.07	0.07	0.097	0.0692891	0.0567	0.0357	0.062	0.1142	0.0613	0.06	0.04	0.07	0.12	0.0668	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.426568	NA	NA	0.06314	0.121879	NA	0.087	NA	3.81336
1271	11	14810762	14810762	A	G	exonic	PDE3B	NA	synonymous SNV	PDE3B:NM_000922:exon4:c.A1389G:p.R463R	exonic	ENSG00000152270	NA	synonymous SNV	ENSG00000152270:ENST00000282096:exon4:c.A1389G:p.R463R,ENSG00000152270:ENST00000455098:exon4:c.A1236G:p.R412R	NA	NA	11p15.2	NA	NA	NA	NA	rs4757268	0.65	0.65	0.63	0.671326	0.6173	0.6806	0.7017	0.708	0.6462	0.59	0.67	0.68	0.67	0.6291	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.095526	NA	NA	0.60701	0.677045	ID=COSM147149;OCCURENCE=1(stomach)	0.652	NA	3.8132566
1271	2	69049398	69049398	C	G	intronic	ARHGAP25	NA	NA	NA	intronic	ENSG00000163219	NA	NA	NA	NA	NA	2p13.3	NA	NA	NA	NA	rs35216182	0.25	0.25	0.248	0.266573	0.1869	0.4435	0.317	0.174	0.2556	0.19	0.39	0.3	0.16	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.254662	NA	NA	NA	NA	NA	0.174	NA	3.8131
1271	6	106681990	106681990	G	A	intronic	ATG5	NA	NA	NA	intronic	ENSG00000057663	NA	NA	NA	NA	NA	6q21	NA	NA	NA	NA	rs77791277	0.1	0.1	0.067	0.108227	0.1869	0.0317	0.0994	0.053	0.1871	0.19	0.02	0.1	0.05	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.681583	NA	NA	NA	NA	NA	0.138	NA	3.8131
1271	7	38782944	38782944	A	G	intronic	VPS41	NA	NA	NA	intronic	ENSG00000006715	NA	NA	NA	NA	NA	7p14.1	NA	NA	NA	NA	rs11971020	0.28	0.28	0.276	0.334665	0.1869	0.4395	0.1225	0.385	0.4611	0.19	0.44	0.15	0.35	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.952502	NA	NA	NA	NA	NA	0.246	NA	3.8131
1271	10	39011152	39011152	G	A	intergenic	ACTR3BP5,NONE	dist=19781;dist=NONE	NA	NA	ncRNA_intronic	ENSG00000234541	NA	NA	NA	NA	NA	10p11.1	NA	NA	NA	NA	rs2310211	0.23	0.23	0.206	0.223043	0.1869	0.2907	0.2349	0.2542	0.1401	0.18	0.27	0.25	0.23	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.647125	NA	NA	NA	NA	NA	0.007	NA	3.8131
1271	10	126691471	126691471	G	A	intronic	CTBP2	NA	NA	NA	intronic	ENSG00000175029	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs4348846	0.32	0.32	0.297	0.315096	0.1869	0.252	0.3588	0.5787	0.1247	0.19	0.3	0.34	0.53	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.611093	NA	NA	NA	NA	NA	0.275	NA	3.8131
1271	14	65392918	65392918	G	A	intronic	CHURC1,CHURC1-FNTB	NA	NA	NA	intronic	ENSG00000125954,ENSG00000258289	NA	NA	NA	NA	NA	14q23.3	NA	NA	NA	NA	rs2147615	0.22	0.22	0.223	0.25599	0.1869	0.128	0.196	0.4123	0.2904	0.18	0.13	0.21	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.53178	NA	NA	NA	NA	NA	0.239	NA	3.8131
1271	20	3262493	3262493	T	C	intronic	C20orf194	NA	NA	NA	intronic	ENSG00000088854	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs6051708	0.19	0.19	0.194	0.186502	0.1869	0.1438	0.1744	0.2458	0.1585	0.18	0.16	0.14	0.25	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.695992	NA	NA	NA	NA	NA	0.246	NA	3.8131
1271	20	3270621	3270621	C	T	intronic	C20orf194	NA	NA	NA	intronic	ENSG00000088854	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs6037535	0.18	0.18	0.189	0.178714	0.1869	0.1379	0.1729	0.2216	0.1585	0.18	0.16	0.14	0.24	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.426242	NA	NA	NA	NA	NA	0.239	NA	3.8131
1271	20	34446395	34446395	A	G	intronic	PHF20	NA	NA	NA	intronic	ENSG00000025293	NA	NA	NA	NA	NA	20q11.23	NA	NA	NA	NA	rs2425178	0.23	0.23	0.235	0.291134	0.1869	0.1835	0.1859	0.4281	0.3988	0.18	0.16	0.22	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.283548	NA	NA	NA	NA	NA	0.239	NA	3.8131
1271	20	40827713	40827713	A	T	intronic	PTPRT	NA	NA	NA	intronic	ENSG00000196090	NA	NA	NA	NA	NA	20q12	NA	NA	NA	NA	rs6072653	0.11	0.11	0.105	0.121605	0.1869	0.0079	0.1427	0.1021	0.183	0.18	0.01	0.13	0.1	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.034534	NA	NA	NA	NA	NA	0.08	NA	3.8131
1271	20	61369472	61369472	T	C	intronic	NTSR1	NA	NA	NA	intronic	ENSG00000101188	NA	NA	NA	NA	NA	20q13.33	NA	NA	NA	NA	rs3915568	0.15	0.15	0.122	0.13758	0.1869	0.1647	0.2305	0.0106	0.1646	0.19	0.16	0.22	0.01	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.090997	NA	NA	NA	NA	NA	0.065	NA	3.8131
1271	14	96777408	96777408	T	C	intronic	ATG2B	NA	NA	NA	intronic	ENSG00000066739	NA	NA	NA	NA	NA	14q32.2	NA	NA	Name=3	NA	rs3759602	0.3	0.3	0.27	0.2502	0.4066	0.1786	0.4582	0.1142	0.1994	0.42	0.21	0.44	0.1	0.3581	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.983367	NA	NA	0.422442	0.172038	NA	0.312	NA	3.812858
1271	1	220321023	220321023	A	G	UTR3	IARS2	NM_018060:c.*46A>G	NA	NA	UTR3	ENSG00000067704	ENST00000366922:c.*46A>G,ENST00000302637:c.*46A>G	NA	NA	NA	NA	1q41	NA	NA	NA	NA	rs11095	0.14	0.14	0.122	0.126797	0.1541	0.1329	0.2493	0.0182	0.1524	0.15	0.17	0.22	0.03	0.1836	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.694831	NA	NA	0.182791	0.047889	NA	0.058	NA	3.8128424
1271	1	37978999	37978999	A	C	intronic	MEAF6	NA	NA	NA	intronic	ENSG00000163875	NA	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	rs72657778	0.03	0.03	0.012	0.0225639	0.0547	0.0079	0.0202	0.0023	0.0337	0.06	0.0035	0.02	0.0041	0.0542	0.079	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.634205	3.634205	NA	0.078488	0.017703	NA	0.029	NA	3.812612
1271	6	90826709	90826709	T	C	intronic	BACH2	NA	NA	NA	ncRNA_exonic	ENSG00000218730	NA	NA	NA	NA	NA	6q15	NA	NA	NA	NA	rs207268	0.48	0.48	0.458	0.509185	0.5209	0.2212	0.6167	0.6346	0.5481	0.51	0.23	0.59	0.64	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.129448	NA	NA	NA	NA	NA	0.507	NA	3.8124333
1271	9	140331797	140331797	G	A	intronic	ENTPD8	NA	NA	NA	intronic	ENSG00000188833	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs61303368	0.08	0.08	0.073	0.0850639	0.0616	0.1389	0.0389	0.1248	0.0327	0.06	0.13	0.04	0.1	0.0676	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.013184	NA	NA	0.058399	0.110656	NA	0.072	NA	3.812401
1271	8	145007534	145007534	C	T	intronic	PLEC	NA	NA	NA	intronic	ENSG00000178209	NA	NA	NA	NA	NA	8q24.3	NA	NA	Name=12	NA	rs7003580	0.39	0.39	0.424	0.398363	0.4125	0.1478	0.3256	0.6596	0.3405	0.4	0.16	0.33	0.68	0.3804	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.306729	NA	NA	0.394861	0.610075	NA	0.486	NA	3.812239
1271	16	17228368	17228368	G	A	exonic	XYLT1	NA	synonymous SNV	XYLT1:NM_022166:exon9:c.C1989T:p.A663A	exonic	ENSG00000103489	NA	synonymous SNV	ENSG00000103489:ENST00000261381:exon9:c.C1989T:p.A663A	NA	NA	16p12.3	NA	NA	NA	NA	rs12708815	0.4	0.4	0.382	0.365415	0.6471	0.1032	0.5346	0.1936	0.4581	0.65	0.11	0.61	0.2	0.5569	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.018856	2.018856	NA	0.650465	0.282658	NA	0.413	NA	3.8122016
1271	1	15812665	15812665	G	T	intronic	CELA2B	NA	NA	NA	intronic	ENSG00000215704	NA	NA	NA	NA	NA	1p36.21	NA	NA	NA	NA	rs2861484	0.16	0.16	0.15	0.158746	0.1879	0.0456	0.1585	0.2027	0.1861	0.19	0.05	0.2	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.964143	NA	NA	NA	NA	NA	0.123	NA	3.8121
1271	1	22336120	22336120	T	C	intronic	CELA3A	NA	NA	NA	intronic	ENSG00000142789	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs4344303	0.29	0.29	0.25	0.280751	0.1879	0.4008	0.4078	0.2398	0.2178	0.2	0.37	0.38	0.25	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.908818	NA	NA	NA	NA	NA	0.261	NA	3.8121
1271	6	20042802	20042802	T	C	intergenic	ID4,MBOAT1	dist=200371;dist=57114	NA	NA	ncRNA_exonic	ENSG00000229700	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs11757690	0.18	0.18	0.168	0.170927	0.1879	0.1101	0.196	0.1846	0.18	0.19	0.12	0.2	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.022487	NA	NA	NA	NA	NA	0.217	NA	3.8121
1271	9	93514242	93514242	G	A	intergenic	DIRAS2,SYK	dist=109134;dist=49770	NA	NA	ncRNA_exonic	ENSG00000270432	NA	NA	NA	NA	NA	9q22.2	NA	NA	NA	NA	rs12380216	0.09	0.09	0.086	0.0792732	0.1879	0.0188	0.1052	0.0189	0.093	0.18	0.02	0.12	0.02	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.080249	NA	NA	NA	NA	NA	0.13	NA	3.8121
1271	2	182359592	182359592	T	C	intronic	ITGA4	NA	NA	NA	intronic	ENSG00000115232	NA	NA	NA	NA	NA	2q31.3	NA	NA	NA	NA	rs16867434	0.13	0.13	0.12	0.119409	0.1014	0.0476	0.1873	0.2216	0.0256	0.1	0.06	0.16	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.402692	NA	NA	0.086587	0.20737	NA	0.116	NA	3.812013
1271	13	96579462	96579462	T	C	intronic	UGGT2	NA	NA	NA	intronic	ENSG00000102595	NA	NA	NA	Score=476;Name=lod=115	NA	13q32.1	NA	NA	NA	NA	rs9525086	0.36	0.36	0.333	0.353435	0.3777	0.4702	0.4438	0.1762	0.3834	0.38	0.47	0.4	0.16	0.4005	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.238221	2.238221	NA	0.409916	0.221062	NA	0.312	NA	3.811884
1271	15	101529054	101529054	G	A	intronic	LRRK1	NA	NA	NA	intronic	ENSG00000154237	NA	NA	NA	NA	NA	15q26.3	NA	NA	NA	NA	rs75154381	0.03	0.03	0.029	0.0361422	0.0696	0.001	0.0447	0.0068	0.0716	0.07	0.0017	0.06	0.0041	0.0545	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.939235	NA	NA	0.064112	0.015403	NA	0.043	NA	3.811788
1271	19	20295146	20295146	G	A	intronic	ZNF486	NA	NA	NA	ncRNA_intronic	ENSG00000267383	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs1097510	0.28	0.28	0.271	0.288538	0.1481	0.4593	0.3112	0.2663	0.271	0.15	0.5	0.27	0.24	0.2248	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.953698	NA	NA	0.148699	0.247981	NA	0.254	NA	3.8117343
1271	18	29426649	29426649	A	G	intronic	TRAPPC8	NA	NA	NA	intronic	ENSG00000153339	NA	NA	NA	NA	NA	18q12.1	NA	NA	NA	NA	rs76349894	0.05	0.05	0.045	0.0473243	0.0636	0.0109	0.0447	0.0666	0.044	0.07	0.01	0.03	0.08	0.0581	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.224542	NA	NA	0.06686	0.064685	NA	0.051	NA	3.81144
1271	19	51767485	51767485	A	G	intronic	SIGLECL1	NA	NA	NA	ncRNA_intronic	ENSG00000268595	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs875283	0.6	0.6	0.575	0.594449	0.5219	0.5139	0.7161	0.8192	0.362	0.52	0.48	0.67	0.8	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.374608	NA	NA	NA	NA	NA	0.638	NA	3.8114333
1271	2	202589257	202589257	T	C	intronic	ALS2	NA	NA	NA	intronic	ENSG00000003393	NA	NA	NA	NA	NA	2q33.1	NA	NA	NA	NA	rs3219163	0.26	0.26	0.263	0.296526	0.1889	0.3859	0.1239	0.3071	0.4233	0.21	0.38	0.1	0.33	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.764217	NA	NA	NA	NA	NA	0.239	NA	3.8111
1271	6	2785112	2785112	G	A	intronic	WRNIP1	NA	NA	NA	intronic	ENSG00000124535	NA	NA	NA	NA	NA	6p25.2	NA	NA	NA	NA	rs160701	0.2	0.2	0.167	0.204673	0.1889	0.3115	0.2176	0.0582	0.2996	0.19	0.34	0.19	0.05	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.856558	NA	NA	NA	NA	NA	0.138	NA	3.8111
1271	8	143832373	143832373	G	A	intronic	LYPD2	NA	NA	NA	intronic	ENSG00000197353	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs10808680	0.26	0.26	0.262	0.270367	0.1889	0.4048	0.1671	0.2806	0.2751	0.19	0.4	0.17	0.26	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.116057	NA	NA	NA	NA	NA	0.246	NA	3.8111
1271	13	31821093	31821093	T	C	intronic	B3GALTL	NA	NA	NA	intronic	ENSG00000187676	NA	NA	NA	NA	NA	13q12.3	NA	NA	NA	NA	rs9542300	0.25	0.25	NA	0.189297	0.1889	0.2083	0.1628	0.1407	0.2546	0.27	0.28	0.19	0.23	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.491916	NA	NA	NA	NA	NA	0.261	NA	3.8111
1271	14	20760349	20760349	G	A	intronic	TTC5	NA	NA	NA	intronic	ENSG00000136319	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs11625081	0.1	0.1	0.077	0.123003	0.1889	0.1091	0.0908	0.0378	0.2076	0.16	0.09	0.09	0.03	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.578154	NA	NA	NA	NA	NA	NA	NA	3.8111
1271	14	20760350	20760350	C	A	intronic	TTC5	NA	NA	NA	intronic	ENSG00000136319	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs11628513	0.1	0.1	0.079	0.123003	0.1889	0.1091	0.0908	0.0378	0.2076	0.16	0.09	0.09	0.03	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.076093	NA	NA	NA	NA	NA	NA	NA	3.8111
1271	9	137716422	137716422	C	T	intronic	COL5A1	NA	NA	NA	intronic	ENSG00000130635	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs45443491	0.03	0.03	0.028	0.019369	0.0616	NA	0.0303	NA	0.0143	0.07	NA	0.03	NA	0.0499	0.077	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.303922	NA	NA	0.077442	0.01317	NA	0.072	NA	3.811058
1271	8	133975183	133975183	A	G	intronic	TG	NA	NA	NA	intronic	ENSG00000042832	NA	NA	NA	NA	NA	8q24.22	NA	NA	NA	NA	rs76745731	0.06	0.06	0.054	0.0852636	0.0865	0.0407	0.1052	0.0681	0.1391	0.08	0.03	0.11	0.04	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.05559	NA	NA	0.102451	0.070809	NA	0.116	NA	3.811049
1271	7	2966334	2966334	G	A	intronic	CARD11	NA	NA	NA	intronic	ENSG00000198286	NA	NA	NA	NA	NA	7p22.2	NA	NA	NA	NA	rs41448444	0.03	0.03	0.032	0.0239617	0.0716	0.001	0.0461	0.0038	0.0102	0.06	0.0017	0.05	0.01	0.0491	0.068	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.608092	NA	NA	0.068256	0.012483	NA	0.036	NA	3.811044
1271	21	43240446	43240446	C	T	intronic	PRDM15	NA	NA	NA	intronic	ENSG00000141956	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs73375539	0.09	0.09	0.106	0.123403	0.0477	0.005	0.062	0.3033	0.1237	0.05	0.0017	0.07	0.29	0.0809	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.943914	NA	NA	0.06093	0.262596	NA	0.109	NA	3.81047
1271	1	115110683	115110683	A	C	UTR3	BCAS2	NM_005872:c.*68T>G	NA	NA	UTR3	ENSG00000116752	ENST00000369541:c.*68T>G	NA	NA	NA	NA	1p13.2	NA	NA	NA	NA	rs8128	0.49	0.49	0.448	0.470048	0.5229	0.499	0.4813	0.4788	0.3661	0.52	0.46	0.5	0.46	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.522362	NA	NA	NA	NA	ID=COSN163195;OCCURENCE=1(breast)	0.551	NA	3.8104334
1271	6	160211554	160211554	T	G	UTR5	MRPL18	NM_014161:c.-66T>G	NA	NA	UTR5	ENSG00000112110	ENST00000367034:c.-66T>G	NA	NA	NA	NA	6q25.3	NA	Name=YY1,Pol2-4H8,Pbx3,Sin3Ak-20,Pol2(b),THAP1_(SC-98174),IRF1,TBP,HEY1,IRF3,SRF,SP1,NRSF,Pol2,YY1_(C-20),NF-YA,TAF1,GABP,CHD2_(N-1250),GTF2F1_(RAP-74),ELF1_(SC-631),NF-YB	NA	NA	rs1128661	0.66	0.66	0.624	0.664936	0.7575	0.5873	0.8285	0.4818	0.7812	0.77	0.57	0.81	0.5	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.410242	1.410242	NA	0.765556	0.528179	NA	0.514	NA	3.8102774
1271	15	42445554	42445554	G	T	intronic	PLA2G4F	NA	NA	NA	intronic	ENSG00000168907	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs10220859	0.15	0.15	0.142	0.190495	0.0427	0.1121	0.2925	0.357	0.1258	0.04	0.09	0.23	0.34	0.0994	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.008086	NA	NA	0.047686	0.31094	NA	0.174	NA	3.810214
1271	3	180491061	180491061	T	C	intergenic	CCDC39,FXR1	dist=93778;dist=139173	NA	NA	ncRNA_exonic	ENSG00000242068	NA	NA	NA	NA	NA	3q26.33	NA	NA	NA	NA	rs4277689	0.37	0.37	0.377	0.417133	0.1899	0.4196	0.2911	0.7035	0.3507	0.19	0.41	0.28	0.67	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.809876	NA	NA	NA	NA	NA	0.333	NA	3.8101
1271	4	47562820	47562820	T	C	intronic	ATP10D	NA	NA	NA	intronic	ENSG00000145246	NA	NA	NA	NA	NA	4p12	NA	NA	NA	NA	rs73237101	0.1	0.1	0.08	0.0772764	0.1899	0.0079	0.0865	0.0272	0.0941	0.2	0.01	0.11	0.03	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.269579	NA	NA	NA	NA	NA	0.036	NA	3.8101
1271	11	62545346	62545346	T	C	intronic	TAF6L	NA	NA	NA	intronic	ENSG00000162227,ENSG00000168569	NA	NA	NA	NA	NA	11q12.3	NA	NA	NA	NA	rs633742	0.24	0.24	0.244	0.251398	0.1899	0.3363	0.1729	0.2784	0.2464	0.19	0.31	0.19	0.28	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.707924	NA	NA	NA	NA	NA	0.268	NA	3.8101
1271	11	65978396	65978396	A	G	intronic	PACS1	NA	NA	NA	intronic	ENSG00000175115	NA	NA	NA	NA	NA	11q13.2	NA	NA	NA	NA	rs10791858	0.21	0.21	0.193	0.221046	0.1899	0.2946	0.1715	0.2352	0.1933	0.19	0.28	0.17	0.18	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.765001	NA	NA	NA	NA	NA	0.239	NA	3.8101
1271	11	65978453	65978453	C	T	intronic	PACS1	NA	NA	NA	intronic	ENSG00000175115	NA	NA	NA	NA	NA	11q13.2	NA	NA	NA	NA	rs10791859	0.21	0.21	0.199	0.221046	0.1899	0.2946	0.1715	0.2352	0.1933	0.19	0.28	0.17	0.18	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.701741	NA	NA	NA	NA	NA	0.232	NA	3.8101
1271	11	117090545	117090545	T	C	intronic	PCSK7	NA	NA	NA	intronic	ENSG00000160613	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs3882895	0.24	0.24	0.264	0.279952	0.1899	0.1528	0.2738	0.4622	0.2618	0.18	0.19	0.22	0.42	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.938382	NA	NA	NA	NA	NA	0.196	NA	3.8101
1271	12	47170621	47170621	C	A	intronic	SLC38A4	NA	NA	NA	intronic	ENSG00000139209	NA	NA	NA	NA	NA	12q13.11	NA	NA	NA	NA	rs12316767	0.17	0.17	0.164	0.176318	0.1899	0.1438	0.1138	0.1846	0.229	0.2	0.12	0.14	0.21	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.101632	3.101632	NA	NA	NA	NA	0.21	NA	3.8101
1271	14	100129071	100129071	A	G	intronic	HHIPL1	NA	NA	NA	intronic	ENSG00000182218	NA	NA	NA	NA	NA	14q32.2	NA	NA	NA	NA	rs11160535	0.22	0.22	0.184	0.21845	0.1899	0.2728	0.183	0.2254	0.2076	0.17	0.28	0.19	0.24	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.232018	NA	NA	NA	NA	NA	NA	NA	3.8101
1271	14	100129072	100129072	T	G	intronic	HHIPL1	NA	NA	NA	intronic	ENSG00000182218	NA	NA	NA	NA	NA	14q32.2	NA	NA	NA	NA	rs10133513	0.21	0.21	0.181	0.21845	0.1899	0.2728	0.183	0.2254	0.2076	0.17	0.27	0.19	0.24	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.743744	NA	NA	NA	NA	NA	NA	NA	3.8101
1271	22	37494318	37494318	T	C	intronic	TMPRSS6	NA	NA	NA	intronic	ENSG00000187045	NA	NA	NA	NA	NA	22q12.3	NA	NA	NA	NA	rs732755	0.16	0.16	0.161	0.13758	0.1899	0.1796	0.1182	0.0756	0.138	0.2	0.2	0.14	0.08	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.038363	NA	NA	NA	NA	NA	0.145	NA	3.8101
1271	22	37494721	37494721	T	C	intronic	TMPRSS6	NA	NA	NA	intronic	ENSG00000187045	NA	NA	NA	NA	NA	22q12.3	NA	NA	NA	NA	rs8139988	0.16	0.16	0.157	0.13758	0.1899	0.1796	0.1182	0.0756	0.138	0.2	0.2	0.14	0.08	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.058746	NA	NA	NA	NA	NA	0.203	NA	3.8101
1271	10	38682079	38682079	T	C	ncRNA_intronic	SEPT7P9	NA	NA	NA	ncRNA_intronic	ENSG00000120555	NA	NA	NA	NA	NA	10p11.1	NA	NA	NA	NA	rs2754366	0.5	0.5	0.471	0.480431	0.4205	0.5258	0.4899	0.6392	0.274	0.43	0.49	0.46	0.63	0.4361	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.300764	NA	NA	NA	NA	NA	0.413	NA	3.8100666
1271	9	33469191	33469191	C	T	intronic	NOL6	NA	NA	NA	intronic	ENSG00000165271	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs2777747	0.09	0.09	0.105	0.0910543	0.0626	0.0258	0.0576	0.2398	0.0102	0.05	0.04	0.07	0.22	0.0658	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.975784	NA	NA	0.061628	0.22719	NA	0.152	NA	3.809972
1271	9	33468728	33468728	T	C	intronic	NOL6	NA	NA	NA	intronic	ENSG00000165271	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs2777748	0.09	0.09	0.093	0.0916534	0.0626	0.0258	0.0591	0.2413	0.0102	0.05	0.04	0.07	0.22	0.0661	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.180228	NA	NA	0.061512	0.230368	NA	0.152	NA	3.809788
1271	2	160602258	160602258	A	G	intronic	MARCH7	NA	NA	NA	intronic	ENSG00000136536	NA	NA	NA	Score=272;Name=lod=17	NA	2q24.2	NA	NA	NA	NA	rs59109898	0.32	0.32	0.27	0.258786	0.4175	0.2937	0.5375	0.0325	0.1677	0.43	0.31	0.5	0.04	0.3717	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.563663	2.563663	NA	0.401023	0.084927	NA	0.362	NA	3.809777
1271	15	101552180	101552180	A	G	intronic	LRRK1	NA	NA	NA	intronic	ENSG00000154237	NA	NA	NA	NA	NA	15q26.3	NA	NA	NA	NA	rs72765101	0.03	0.03	0.026	0.0347444	0.0696	NA	0.0418	0.0015	0.0746	0.07	NA	0.06	0.002	0.0529	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.324859	NA	NA	0.067842	0.011697	NA	0.058	NA	3.809658
1271	19	50463727	50463727	G	A	intronic	SIGLEC11	NA	NA	NA	intronic	ENSG00000161640	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs80184294	0.21	0.21	0.179	NA	NA	NA	NA	NA	NA	0.15	0.24	0.16	0.29	0.1906	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.544598	2.544598	NA	NA	NA	NA	0.051	NA	3.8094
1271	10	27350056	27350056	G	T	intronic	ANKRD26	NA	NA	NA	intronic	ENSG00000107890	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs11015496	0.09	0.09	0.074	0.0972444	0.0626	0.126	0.036	0.1505	0.0746	0.06	0.12	0.06	0.12	0.0709	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.637078	NA	NA	0.057265	0.133441	NA	0.072	NA	3.809235
1271	10	27349249	27349249	A	G	intronic	ANKRD26	NA	NA	NA	intronic	ENSG00000107890	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs7080104	0.09	0.09	0.088	0.0972444	0.0626	0.126	0.036	0.1505	0.0746	0.06	0.12	0.06	0.12	0.0709	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.20966	NA	NA	0.05728	0.13573	NA	0.072	NA	3.80922
1271	10	125426412	125426412	A	G	exonic	GPR26	NA	synonymous SNV	GPR26:NM_153442:exon1:c.A489G:p.P163P	exonic	ENSG00000154478	NA	synonymous SNV	ENSG00000154478:ENST00000284674:exon1:c.A489G:p.P163P	NA	NA	10q26.13	NA	NA	NA	NA	rs12263344	0.55	0.55	0.566	0.551917	0.6322	0.38	0.5706	0.618	0.544	0.63	0.39	0.58	0.59	0.5897	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.327356	NA	NA	0.635591	0.63624	ID=COSM1346532;OCCURENCE=1(large_intestine)	0.109	NA	3.8091756
1271	1	160061934	160061934	T	C	intronic	IGSF8	NA	NA	NA	intronic	ENSG00000162729	NA	NA	NA	NA	NA	1q23.2	NA	NA	NA	NA	rs12408242	0.17	0.17	0.139	0.15635	0.1909	0.2262	0.255	0.0197	0.1636	0.2	0.21	0.23	0.03	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.373439	NA	NA	NA	NA	NA	0.283	NA	3.8091
1271	1	160061959	160061959	C	T	intronic	IGSF8	NA	NA	NA	intronic	ENSG00000162729	NA	NA	NA	NA	NA	1q23.2	NA	NA	NA	NA	rs12401728	0.17	0.17	0.135	0.15655	0.1909	0.2262	0.2565	0.0197	0.1636	0.2	0.21	0.23	0.03	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.679714	NA	NA	NA	NA	NA	0.283	NA	3.8091
1271	2	231326201	231326201	C	G	intronic	SP100	NA	NA	NA	intronic	ENSG00000067066	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs11681514	0.19	0.19	0.154	0.182708	0.1909	0.128	0.2176	0.2277	0.1452	0.18	0.12	0.24	0.22	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.842506	NA	NA	NA	NA	NA	0.167	NA	3.8091
1271	3	120394521	120394521	T	C	intronic	HGD	NA	NA	NA	intronic	ENSG00000113924	NA	NA	NA	NA	NA	3q13.33	NA	NA	NA	NA	rs17140396	0.19	0.19	0.192	0.211062	0.1909	0.0109	0.2536	0.4047	0.1462	0.19	0.01	0.22	0.37	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.72972	NA	NA	NA	NA	NA	0.283	NA	3.8091
1271	4	48494708	48494708	A	T	intronic	ZAR1	NA	NA	NA	intronic	ENSG00000182223	NA	NA	NA	NA	NA	4p11	NA	NA	NA	NA	rs35912975	0.11	0.11	0.105	0.11222	0.1909	0.1081	0.1037	0.0303	0.1524	0.2	0.08	0.09	0.03	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.642785	NA	NA	NA	NA	NA	0.138	NA	3.8091
1271	10	115338615	115338615	A	G	intronic	HABP2	NA	NA	NA	intronic	ENSG00000148702	NA	NA	NA	NA	NA	10q25.3	NA	NA	NA	NA	rs11575684	0.2	0.2	0.188	0.180711	0.1909	0.3095	0.1816	0.115	0.1258	0.17	0.31	0.22	0.12	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.171337	NA	NA	NA	NA	NA	0.152	NA	3.8091
1271	11	10518585	10518585	A	G	intronic	AMPD3	NA	NA	NA	intronic	ENSG00000133805	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs2071017	0.23	0.23	0.211	0.251797	0.1909	0.4802	0.1369	0.1256	0.3313	0.18	0.43	0.13	0.14	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.281519	NA	NA	NA	NA	NA	0.254	NA	3.8091
1271	12	21970019	21970019	C	T	intronic	ABCC9	NA	NA	NA	intronic	ENSG00000069431	NA	NA	NA	NA	NA	12p12.1	NA	NA	NA	NA	rs2638441	0.21	0.21	0.206	0.245807	0.1909	0.1468	0.1801	0.357	0.3006	0.18	0.13	0.18	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.137118	NA	NA	NA	NA	NA	0.21	NA	3.8091
1271	16	20750133	20750133	G	A	intronic	THUMPD1	NA	NA	NA	intronic	ENSG00000005187,ENSG00000066654	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs2301769	0.23	0.23	0.208	0.193091	0.1909	0.4226	0.255	0.0106	0.1616	0.19	0.45	0.27	0.01	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.13108	2.13108	NA	NA	NA	NA	0.167	NA	3.8091
1271	20	34214368	34214368	T	C	intronic	CPNE1	NA	NA	NA	intronic	ENSG00000214078	NA	NA	NA	NA	NA	20q11.22	NA	NA	NA	NA	rs6060516	0.22	0.22	0.222	0.267971	0.1909	0.1359	0.183	0.4077	0.3548	0.19	0.11	0.22	0.38	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.588865	NA	NA	NA	NA	NA	0.254	NA	3.8091
1271	22	20031102	20031102	G	A	intronic	TANGO2	NA	NA	NA	intronic	ENSG00000183597	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs12627769	0.14	0.14	0.121	0.151358	0.1909	0.119	0.1873	0.0915	0.1994	0.18	0.1	0.17	0.08	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.632586	NA	NA	NA	NA	NA	0.087	NA	3.8091
1271	17	76129910	76129910	A	C	intronic	TMC8	NA	NA	NA	intronic	ENSG00000167895	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs58590476	0.09	0.09	0.081	0.0832668	0.0686	0.0744	0.0548	0.1415	0.0491	0.07	0.08	0.06	0.15	0.0651	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.147463	NA	NA	0.057249	0.113987	NA	0.065	NA	3.809051
1271	X	1531765	1531765	C	G	ncRNA_exonic	ASMTL-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000236017	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs5948842	0.42	0.42	0.40223	NA	NA	NA	NA	NA	NA	0.44	0.41	0.43	0.4	0.4333	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.365664	NA	NA	0.424638	0.421788	NA	0.464	NA	3.8087286
1271	20	20029954	20029954	T	C	intronic	CRNKL1	NA	NA	NA	intronic	ENSG00000101343	NA	NA	NA	NA	NA	20p11.23	NA	NA	NA	NA	rs66621993	0.22	0.22	0.184	0.20607	0.0298	0.5883	0.1873	0.1415	0.0941	0.03	0.59	0.16	0.12	0.1272	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.493386	NA	NA	0.034559	0.123751	NA	0.116	NA	3.808441
1271	11	119217311	119217311	G	A	UTR5	C1QTNF5,MFRP	NM_015645:c.-6204C>T;NM_031433:c.-88C>T	NA	NA	UTR5	ENSG00000223953,ENSG00000235718,ENSG00000259159	ENST00000445041:c.-6204C>T;ENST00000555262:c.-88C>T,ENST00000449574:c.-88C>T,ENST00000360167:c.-88C>T;ENST00000530681:c.-88C>T	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs883245	0.57	0.57	0.541	0.583866	0.5249	0.7708	0.5115	0.4395	0.6984	0.52	0.76	0.53	0.44	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.17307	NA	NA	NA	NA	NA	0.536	NA	3.8084334
1271	X	1531770	1531770	T	C	ncRNA_exonic	ASMTL-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000236017	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs5949004	0.42	0.42	0.39269	NA	NA	NA	NA	NA	NA	0.44	0.41	0.43	0.4	0.4334	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.064791	NA	NA	0.424849	0.422335	NA	0.464	NA	3.8084176
1271	1	11735245	11735245	A	C	intronic	MAD2L2	NA	NA	NA	intronic	ENSG00000116670	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs878778	0.16	0.16	0.15	0.149561	0.0457	0.4544	0.0951	0.0015	0.181	0.05	0.49	0.09	0.002	0.1009	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.619545	NA	NA	0.045	0.011807	ID=COSN162948;OCCURENCE=1(NS)	0.087	NA	3.8084
1271	1	1991123	1991123	G	A	intronic	PRKCZ	NA	NA	NA	intronic	ENSG00000067606	NA	NA	NA	NA	NA	1p36.33	NA	NA	NA	NA	rs1878746	0.18	0.18	0.16	0.18151	0.1918	0.253	0.2032	0.0567	0.2505	0.18	0.25	0.2	0.07	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.141489	NA	NA	NA	NA	NA	0.145	NA	3.8082
1271	1	34011533	34011533	C	T	intronic	CSMD2	NA	NA	NA	intronic	ENSG00000121904	NA	NA	NA	NA	NA	1p35.1	NA	NA	NA	NA	rs10914742	0.21	0.21	0.203	0.226038	0.1918	0.3294	0.2406	0.1059	0.3067	0.2	0.3	0.2	0.13	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.509108	NA	NA	NA	NA	NA	0.123	NA	3.8082
1271	3	64145510	64145510	G	A	intronic	PRICKLE2	NA	NA	NA	intronic	ENSG00000163637	NA	NA	NA	NA	NA	3p14.1	NA	NA	NA	NA	rs76720468	0.1	0.1	0.097	0.0890575	0.1918	0.003	0.0951	0.0212	0.1595	0.2	0.0035	0.12	0.05	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.500279	NA	NA	NA	NA	NA	0.109	NA	3.8082
1271	5	167922578	167922578	C	T	intronic	RARS	NA	NA	NA	intronic	ENSG00000113643	NA	NA	NA	NA	NA	5q34	NA	NA	NA	NA	rs67012869	0.24	0.24	0.195	0.197085	0.1918	0.2708	0.3372	0.1392	0.1053	0.19	0.33	0.31	0.16	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.248425	NA	NA	NA	NA	NA	0.174	NA	3.8082
1271	12	21693243	21693243	A	T	intronic	GYS2	NA	NA	NA	intronic	ENSG00000111713	NA	NA	NA	NA	NA	12p12.1	NA	NA	NA	NA	rs1871129	NA	NA	NA	0.220647	0.1918	0.1984	0.17	0.3185	0.1769	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.099384	NA	NA	NA	NA	NA	NA	NA	3.8082
1271	12	21693244	21693244	T	A	intronic	GYS2	NA	NA	NA	intronic	ENSG00000111713	NA	NA	NA	NA	NA	12p12.1	NA	NA	NA	NA	rs1871128	0.19	0.19	NA	0.224042	0.1918	0.1994	0.1715	0.329	0.1779	0.17	0.17	0.16	0.27	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.423386	NA	NA	NA	NA	NA	NA	NA	3.8082
1271	10	115515120	115515120	G	A	UTR5	PLEKHS1	NM_001193435:c.-12024G>A,NM_001193434:c.-12024G>A	NA	NA	UTR5	ENSG00000148735	ENST00000369312:c.-12024G>A	NA	NA	NA	Name=Obesity-related traits	10q25.3	NA	NA	NA	NA	rs3981351	0.7	0.7	0.686	0.691294	0.7604	0.5774	0.7507	0.6498	0.7515	0.77	0.6	0.75	0.66	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.068291	NA	NA	0.764928	0.690751	NA	0.688	NA	3.8080054
1271	10	27350201	27350201	T	C	intronic	ANKRD26	NA	NA	NA	intronic	ENSG00000107890	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs11015497	0.09	0.09	0.084	0.0972444	0.0626	0.126	0.036	0.1505	0.0746	0.06	0.12	0.06	0.12	0.0725	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.022377	NA	NA	0.057164	0.135574	NA	0.072	NA	3.807736
1271	2	197583379	197583379	C	T	intronic	CCDC150	NA	NA	NA	intronic	ENSG00000144395	NA	NA	NA	NA	NA	2q33.1	NA	NA	NA	NA	rs6751627	0.08	0.08	0.075	0.10643	0.0596	0.0278	0.0634	0.1936	0.1483	0.06	0.03	0.07	0.15	0.079	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.023011	NA	NA	0.053946	0.160519	ID=COSN166365;OCCURENCE=1(large_intestine)	0.188	NA	3.807454
1271	20	58450287	58450287	T	C	intronic	SYCP2	NA	NA	NA	intronic	ENSG00000196074	NA	NA	NA	NA	NA	20q13.33	NA	NA	NA	NA	rs8125234	0.05	0.05	0.049	0.0473243	0.0775	NA	0.0346	0.093	0.0123	0.07	NA	0.03	0.1	0.0598	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.325896	NA	NA	0.055258	0.08896	NA	0.036	NA	3.807442
1271	3	50102446	50102446	T	C	intronic	RBM6	NA	NA	NA	intronic	ENSG00000004534	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs115669815	0.04	0.04	0.037	0.0477236	0.0626	0.0258	0.0202	0.0061	0.1309	0.07	0.03	0.04	0.01	0.0664	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.108013	2.108013	NA	0.063721	0.010667	NA	0.014	NA	3.807279
1271	1	33840795	33840795	T	G	intronic	PHC2	NA	NA	NA	intronic	ENSG00000134686	NA	NA	NA	NA	NA	1p35.1	NA	NA	NA	NA	rs10914693	0.14	0.14	0.151	0.155351	0.1928	0.0437	0.111	0.1664	0.2485	0.2	0.05	0.13	0.17	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.296931	NA	NA	NA	NA	NA	0.275	NA	3.8072
1271	1	151798295	151798295	G	A	intronic	RORC	NA	NA	NA	intronic	ENSG00000143365	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs12030974	0.22	0.22	0.224	0.246006	0.1928	0.3948	0.3386	0.0144	0.3947	0.19	0.41	0.3	0.01	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.599889	NA	NA	NA	NA	NA	0.174	NA	3.8072
1271	2	201785657	201785657	T	C	intronic	ORC2	NA	NA	NA	intronic	ENSG00000115942	NA	NA	NA	NA	NA	2q33.1	NA	NA	NA	NA	rs2307358	0.19	0.19	0.21	0.191893	0.1928	0.0139	0.147	0.4493	0.0583	0.2	0.0035	0.15	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.796286	NA	NA	NA	NA	NA	0.217	NA	3.8072
1271	2	231326188	231326188	A	G	intronic	SP100	NA	NA	NA	intronic	ENSG00000067066	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs11692640	0.19	0.19	0.149	0.187101	0.1928	0.129	0.2176	0.2421	0.1452	0.19	0.12	0.24	0.24	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.309043	NA	NA	NA	NA	NA	0.167	NA	3.8072
1271	5	97361789	97361789	G	A	intergenic	RIOK2,RGMB	dist=842784;dist=743210	NA	NA	ncRNA_exonic	ENSG00000249101	NA	NA	NA	NA	NA	5q15	NA	NA	NA	NA	rs1965669	0.15	0.15	0.135	0.16234	0.1928	0.2312	0.1499	0.053	0.2168	0.18	0.21	0.14	0.05	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.156598	NA	NA	NA	NA	NA	0.268	NA	3.8072
1271	7	100000274	100000274	C	A	intronic	ZCWPW1	NA	NA	NA	intronic	ENSG00000078487	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs35111986	0.1	0.1	0.08	0.0870607	0.1928	0.0278	0.1052	0.025	0.1104	0.19	0.02	0.1	0.03	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.172378	NA	NA	NA	NA	NA	0.116	NA	3.8072
1271	10	95400054	95400054	C	G	intronic	PDE6C	NA	NA	NA	intronic	ENSG00000095464	NA	NA	NA	NA	NA	10q23.33	NA	NA	NA	NA	rs2275227	0.15	0.15	0.152	0.164137	0.1928	0.1806	0.1599	0.0552	0.2679	0.2	0.16	0.19	0.06	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.901008	NA	NA	NA	NA	NA	0.101	NA	3.8072
1271	11	118011860	118011860	G	A	intronic	SCN4B	NA	NA	NA	intronic	ENSG00000177098	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs12804550	0.14	0.14	0.132	0.141973	0.1928	0.1062	0.1369	0.1407	0.1319	0.18	0.1	0.16	0.12	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.342976	2.342976	NA	NA	NA	NA	0.239	NA	3.8072
1271	14	93398144	93398144	A	G	intronic	CHGA	NA	NA	NA	intronic	ENSG00000100604	NA	NA	NA	NA	NA	14q32.12	NA	NA	NA	NA	rs11851859	0.26	0.26	0.252	0.273163	0.1928	0.4018	0.1527	0.2648	0.32	0.19	0.44	0.15	0.24	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.055654	NA	NA	NA	NA	NA	0.341	NA	3.8072
1271	12	18534866	18534866	C	A	intronic	PIK3C2G	NA	NA	NA	intronic	ENSG00000139144	NA	NA	NA	NA	NA	12p12.3	NA	NA	NA	NA	rs11044057	0.17	0.17	0.138	0.167532	0.1083	0.1776	0.2723	0.2292	0.0603	0.11	0.18	0.24	0.22	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.476619	NA	NA	0.08467	0.221684	NA	0.268	NA	3.80703
1271	16	1255083	1255083	C	T	intronic	CACNA1H	NA	NA	NA	intronic	ENSG00000196557	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs72775445	0.03	0.03	0.023	0.0245607	0.0636	NA	0.0288	0.0023	0.0368	0.06	NA	0.03	0.002	0.0674	0.062	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.639192	NA	NA	0.062048	0.01025	NA	0.007	NA	3.806952
1271	1	153004809	153004809	T	C	UTR5	SPRR1B	NM_003125:c.-13T>C	NA	NA	UTR5	ENSG00000169469	ENST00000307098:c.-13T>C	NA	NA	NA	NA	1q21.3	NA	Name=PAX5-N19	NA	NA	rs3181787	0.52	0.52	0.485	0.49401	0.5099	0.5913	0.4251	0.4402	0.499	0.51	0.62	0.46	0.46	0.5058	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.844643	NA	NA	0.510814	0.468679	NA	0.457	NA	3.8068194
1271	3	78808356	78808356	G	A	intronic	ROBO1	NA	NA	NA	ncRNA_exonic	ENSG00000240752	NA	NA	NA	NA	NA	3p12.3	NA	NA	NA	NA	rs35812135	0.61	0.61	0.633	0.593051	0.5268	0.7361	0.4856	0.7042	0.4397	0.53	0.74	0.48	0.71	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.213699	NA	NA	NA	NA	NA	0.543	NA	3.8065333
1271	15	58467095	58467095	G	A	intronic	AQP9	NA	NA	NA	intronic	ENSG00000103569,ENSG00000128918	NA	NA	NA	NA	NA	15q21.3	NA	Name=MafK_(ab50322)	NA	NA	rs2280195	0.33	0.33	0.322	0.320288	0.3936	0.2232	0.2997	0.3487	0.3211	0.39	0.22	0.35	0.34	0.3741	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.387571	NA	NA	0.425792	0.385493	NA	0.341	NA	3.806508
1271	1	1231507	1231507	G	A	intronic	ACAP3	NA	NA	NA	intronic	ENSG00000131584	NA	NA	NA	NA	NA	1p36.33	NA	NA	NA	NA	rs619608	0.12	0.12	0.109	0.119609	0.0467	0.1647	0.0951	0.1604	0.1104	0.05	0.16	0.12	0.17	0.0968	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.540175	NA	NA	0.05007	0.118277	NA	0.065	NA	3.80643
1271	10	45959652	45959652	C	A	intronic	MARCH8	NA	NA	NA	intronic	ENSG00000165406	NA	NA	NA	NA	NA	10q11.21	NA	NA	NA	NA	rs12771275	0.07	0.07	0.069	0.0499201	0.0785	0.0536	0.0317	0.0552	0.0225	0.08	0.06	0.05	0.08	0.0546	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.201753	NA	NA	0.060698	0.066273	NA	0.014	NA	3.806202
1271	1	39757799	39757799	G	C	intronic	MACF1	NA	NA	NA	intronic	ENSG00000127603	NA	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	rs16826036	0.15	0.15	0.132	0.121206	0.1938	0.1706	0.2061	0.0136	0.0808	0.19	0.17	0.21	0.02	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.359933	NA	NA	NA	NA	NA	0.109	NA	3.8062
1271	1	223116109	223116109	C	T	intronic	DISP1	NA	NA	NA	intronic	ENSG00000154309	NA	NA	NA	NA	NA	1q41	NA	NA	NA	NA	rs75109669	0.13	0.13	0.156	0.122005	0.1938	0.001	0.1182	0.1959	0.0757	0.18	0.0017	0.13	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.902917	NA	NA	NA	NA	NA	0.188	NA	3.8062
1271	6	24418878	24418878	G	A	intronic	MRS2	NA	NA	NA	intronic	ENSG00000124532	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs45478094	0.13	0.13	0.113	0.116214	0.1938	0.1478	0.0965	0.0159	0.1534	0.2	0.16	0.09	0.02	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.607768	NA	NA	NA	NA	NA	0.08	NA	3.8062
1271	9	2103950	2103950	T	C	intronic	SMARCA2	NA	NA	NA	intronic	ENSG00000080503	NA	NA	NA	NA	NA	9p24.3	NA	NA	NA	NA	rs1986592	0.37	0.37	0.424	0.438099	0.1938	0.4147	0.2795	0.8744	0.2362	0.19	0.39	0.25	0.72	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.545211	NA	NA	NA	NA	ID=COSN168460;OCCURENCE=1(large_intestine)	0.428	NA	3.8062
1271	10	71142183	71142183	G	A	intronic	HK1	NA	NA	NA	intronic	ENSG00000156515	NA	NA	NA	NA	NA	10q22.1	NA	NA	NA	NA	rs4746846	0.29	0.29	0.263	0.290335	0.1938	0.497	0.4092	0.1747	0.2485	0.19	0.52	0.38	0.14	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.090902	NA	NA	NA	NA	NA	0.159	NA	3.8062
1271	10	105812690	105812690	G	C	intronic	COL17A1	NA	NA	NA	intronic	ENSG00000065618	NA	NA	NA	NA	NA	10q25.1	NA	NA	NA	NA	rs2274101	0.13	0.13	0.116	0.13738	0.1938	0.12	0.1499	0.0431	0.2157	0.21	0.09	0.14	0.05	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.363884	NA	NA	NA	NA	NA	0.065	NA	3.8062
1271	12	113715251	113715251	T	G	intronic	TPCN1	NA	NA	NA	intronic	ENSG00000186815	NA	NA	NA	NA	NA	12q24.13	NA	NA	NA	NA	rs7955036	0.23	0.23	0.236	0.233027	0.1938	0.2282	0.1354	0.3638	0.1708	0.2	0.26	0.15	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.596165	NA	NA	NA	NA	NA	0.341	NA	3.8062
1271	14	20873524	20873524	A	G	intronic	TEP1	NA	NA	NA	intronic	ENSG00000129566	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs3762146	0.23	0.23	0.247	0.254593	0.1938	0.0923	0.2075	0.444	0.2618	0.19	0.1	0.21	0.44	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.083565	NA	NA	NA	NA	ID=COSN164602;OCCURENCE=1(breast)	0.203	NA	3.8062
1271	17	2888212	2888212	G	A	intronic	RAP1GAP2	NA	NA	NA	intronic	ENSG00000132359	NA	NA	NA	NA	NA	17p13.3	NA	NA	NA	NA	rs12943691	0.13	0.13	0.123	0.0934505	0.1938	0.0645	0.1311	0.0408	0.0644	0.2	0.07	0.18	0.05	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.323873	NA	NA	NA	NA	NA	0.123	NA	3.8062
1271	20	33581889	33581889	T	C	intronic	MYH7B	NA	NA	NA	intronic	ENSG00000078814	NA	NA	NA	NA	NA	20q11.22	NA	NA	NA	NA	rs7268266	0.17	0.17	0.172	0.17512	0.1938	0.1071	0.134	0.1687	0.2638	0.2	0.12	0.16	0.17	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.693945	NA	NA	NA	NA	NA	0.283	NA	3.8062
1271	7	142364553	142364553	G	A	intergenic	LOC730441,MTRNR2L6	dist=392485;dist=9578	NA	NA	exonic	ENSG00000211750	NA	nonsynonymous SNV	ENSG00000211750:ENST00000390397:exon2:c.G188A:p.R63Q	NA	NA	7q34	NA	NA	NA	NA	rs17254	0.23	0.23	0.229	0.218051	0.3569	0.0595	0.2651	0.1694	0.271	0.36	0.07	0.28	0.17	0.3025	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.42194	2.42194	0.04	0.367833	0.189914	NA	0.304	NA	3.8061004
1271	6	30041036	30041036	G	A	intronic	RNF39	NA	NA	NA	intronic	ENSG00000204618	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs62390181	0.07	0.07	0.041	0.0848642	0.0586	0.1925	0.0317	0.0008	0.1524	0.06	0.16	0.04	0.002	0.0731	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.108887	NA	NA	0.0622	0.016214	NA	0.087	NA	3.8061
1271	12	103240630	103240630	C	A	intronic	PAH	NA	NA	NA	intronic	ENSG00000171759	NA	NA	NA	NA	NA	12q23.2	NA	NA	NA	NA	rs1522306	0.27	0.27	0.262	0.269569	0.4254	0.0536	0.3184	0.2443	0.3313	0.42	0.05	0.35	0.24	0.3517	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.008564	NA	NA	0.41686	0.268498	NA	0.246	CLINSIG=non-pathogenic|untested;CLNDBN=not_specified|not_provided;CLNREVSTAT=single|not;CLNACC=RCV000078540.1|RCV000089180.1;CLNDSDB=.|.;CLNDSDBID=.|.	3.80604
1271	12	67700398	67700398	A	T	intronic	CAND1	NA	NA	NA	intronic	ENSG00000111530	NA	NA	NA	NA	NA	12q15	NA	NA	NA	NA	rs34019113	0.07	0.07	0.052	0.0666933	0.0636	0.0704	0.1427	0.0197	0.0757	0.07	0.09	0.11	0.02	0.0734	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.465122	NA	NA	0.057585	0.028597	NA	0.043	NA	3.805415
1271	14	90455460	90455460	G	A	intronic	TDP1	NA	NA	NA	intronic	ENSG00000042088	NA	NA	NA	NA	NA	14q32.11	NA	NA	NA	NA	rs35972056	0.14	0.14	0.156	0.175319	0.0477	0.0357	0.098	0.4788	0.0951	0.05	0.04	0.11	0.43	0.0946	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.278296	NA	NA	0.052326	0.396278	NA	0.13	NA	3.805374
1271	3	130651096	130651096	T	C	intronic	ATP2C1	NA	NA	NA	intronic	ENSG00000017260	NA	NA	NA	NA	NA	3q22.1	NA	NA	NA	NA	rs2685178	0.14	0.14	0.15	0.153754	0.1948	0.0446	0.1326	0.174	0.2117	0.18	0.05	0.13	0.18	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.316117	NA	NA	NA	NA	NA	0.21	NA	3.8052
1271	20	52592070	52592070	G	A	intronic	BCAS1	NA	NA	NA	intronic	ENSG00000064787	NA	NA	NA	NA	NA	20q13.2	NA	NA	NA	NA	rs3815270	0.13	0.13	0.113	0.132588	0.1948	0.1419	0.1354	0.0265	0.2004	0.19	0.12	0.16	0.02	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.303626	NA	NA	NA	NA	NA	0.094	NA	3.8052
1271	6	32797684	32797684	A	G	intronic	TAP2	NA	NA	NA	intronic	ENSG00000204267,ENSG00000250264	NA	NA	NA	NA	NA	6p21.32	NA	Name=ZNF263	NA	NA	rs241437	0.39	0.39	0.39	0.409345	0.3917	0.5377	0.3963	0.239	0.5348	0.39	0.53	0.38	0.26	0.4128	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.302215	NA	NA	0.390365	0.277152	NA	0.297	NA	3.805135
1272	19	11136215	11136215	C	G	intronic	SMARCA4	NA	NA	NA	intronic	ENSG00000127616	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs2075021	0.45	0.45	0.45	0.450879	0.4036	0.5585	0.3026	0.4266	0.5266	0.4	0.59	0.35	0.43	0.4189	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.531621	NA	NA	0.372674	0.426237	NA	0.254	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000114303.2;CLNDSDB=.;CLNDSDBID=.	3.804826
1272	6	5404958	5404958	C	T	intronic	FARS2	NA	NA	NA	intronic	ENSG00000145982	NA	NA	NA	NA	NA	6p25.1	NA	NA	NA	NA	rs7759327	0.08	0.08	0.089	0.0950479	0.0547	0.1091	0.1095	0.1112	0.09	0.04	0.1	0.09	0.12	0.0796	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.923813	NA	NA	0.061163	0.109396	NA	0.065	NA	3.804537
1272	19	54161585	54161585	G	A	intergenic	DPRX,MIR512-2	dist=21322;dist=8342	NA	NA	ncRNA_exonic	ENSG00000270347	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs8103787	0.17	0.17	0.161	0.175319	0.1958	0.0208	0.2003	0.2466	0.1994	0.21	0.01	0.18	0.27	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.135472	NA	NA	NA	NA	NA	0.188	NA	3.8042
1272	1	34006598	34006598	C	G	intronic	CSMD2	NA	NA	NA	intronic	ENSG00000121904	NA	NA	NA	NA	NA	1p35.1	NA	NA	NA	NA	rs12741094	0.23	0.23	0.212	0.238419	0.1958	0.3433	0.245	0.1354	0.3088	0.2	0.32	0.2	0.18	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.504208	NA	NA	NA	NA	NA	0.123	NA	3.8042
1272	2	108875093	108875093	T	A	intronic	SULT1C3	NA	NA	NA	intronic	ENSG00000196228	NA	NA	NA	NA	NA	2q12.3	NA	NA	NA	NA	rs2198463	0.4	0.4	0.39	0.36242	0.1958	0.6994	0.3876	0.3064	0.2444	0.22	0.76	0.37	0.3	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.190127	NA	NA	NA	NA	NA	0.283	NA	3.8042
1272	6	167796182	167796182	C	G	intronic	TCP10	NA	NA	NA	intronic	ENSG00000203690	NA	NA	NA	NA	NA	6q27	NA	NA	NA	NA	rs62428311	0.25	0.25	0.225	0.236422	0.1958	0.3839	0.2594	0.1747	0.1933	0.19	0.4	0.23	0.19	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.676007	NA	NA	NA	NA	NA	0.159	NA	3.8042
1272	8	30977696	30977696	A	G	intronic	WRN	NA	NA	NA	intronic	ENSG00000165392	NA	NA	NA	NA	NA	8p12	NA	NA	NA	NA	rs4987034	0.14	0.14	0.143	0.152955	0.1958	0.1032	0.1311	0.09	0.2607	0.2	0.09	0.13	0.1	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.147069	NA	NA	NA	NA	NA	0.13	NA	3.8042
1272	14	77255835	77255835	C	T	intronic	ANGEL1	NA	NA	NA	intronic	ENSG00000013523	NA	NA	NA	NA	NA	14q24.3	NA	NA	NA	NA	rs3825697	0.18	0.18	0.154	0.194888	0.1958	0.2381	0.2248	0.0756	0.2894	0.2	0.23	0.2	0.08	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.019771	NA	NA	NA	NA	NA	0.167	NA	3.8042
1272	17	73273305	73273305	A	G	intronic	SLC25A19	NA	NA	NA	intronic	ENSG00000125454	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs73996007	0.24	0.24	0.214	0.265176	0.1958	0.1706	0.1945	0.4939	0.1748	0.19	0.11	0.22	0.49	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.249103	NA	NA	NA	NA	NA	0.225	NA	3.8042
1272	19	2110019	2110019	T	C	intronic	AP3D1	NA	NA	NA	intronic	ENSG00000065000	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs2074958	0.27	0.27	0.245	0.27496	0.1958	0.3343	0.1988	0.3026	0.3119	0.19	0.38	0.21	0.3	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.085851	NA	NA	NA	NA	NA	0.188	NA	3.8042
1272	22	42209922	42209922	A	G	intronic	CCDC134	NA	NA	NA	intronic	ENSG00000100147	NA	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs9611672	0.16	0.16	0.115	0.159145	0.1958	0.0635	0.4135	0.0204	0.227	0.19	0.06	0.42	0.03	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.815004	1.815004	NA	NA	NA	NA	0.138	NA	3.8042
1272	22	50306940	50306940	C	T	intronic	ALG12	NA	NA	NA	intronic	ENSG00000182858	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs56377703	0.21	0.21	0.223	0.238019	0.1958	0.1062	0.1326	0.3593	0.3282	0.21	0.12	0.14	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.88622	NA	NA	NA	NA	NA	0.326	NA	3.8042
1272	2	161051853	161051853	A	G	intronic	ITGB6	NA	NA	NA	intronic	ENSG00000115221	NA	NA	NA	NA	NA	2q24.2	NA	NA	NA	NA	rs2124971	0.23	0.23	0.251	0.228035	0.0487	0.4296	0.0778	0.3245	0.181	0.05	0.46	0.07	0.34	0.1102	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.225315	NA	NA	0.036977	0.283477	NA	0.217	NA	3.804123
1272	18	29450300	29450300	T	A	intronic	TRAPPC8	NA	NA	NA	intronic	ENSG00000153339	NA	NA	NA	NA	NA	18q12.1	NA	NA	NA	NA	rs75554495	0.05	0.05	0.056	0.0535144	0.0646	0.0109	0.0447	0.0877	0.046	0.07	0.01	0.03	0.1	0.0632	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.210952	NA	NA	0.068087	0.085189	NA	0.072	NA	3.804113
1272	6	47649573	47649573	C	T	exonic	GPR111	NA	synonymous SNV	GPR111:NM_153839:exon7:c.C1074T:p.S358S	exonic	ENSG00000164393	NA	synonymous SNV	ENSG00000164393:ENST00000398742:exon5:c.C1074T:p.S358S,ENSG00000164393:ENST00000296862:exon6:c.C1278T:p.S426S,ENSG00000164393:ENST00000507065:exon6:c.C1074T:p.S358S,ENSG00000164393:ENST00000467205:exon7:c.C1074T:p.S358S	NA	NA	6p12.3	NA	NA	NA	NA	rs10807371	0.38	0.38	0.469	0.509385	0.6272	0.3085	0.4323	0.4448	0.7372	0.49	0.26	0.43	0.32	0.5907	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.22031	NA	NA	0.645021	0.454616	NA	NA	NA	3.8037456
1272	6	29580265	29580265	G	T	intronic	GABBR1	NA	NA	NA	intronic	ENSG00000204681	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs28359967	0.09	0.09	0.08	0.105631	0.0974	0.12	0.0807	0.0946	0.1319	0.08	0.12	0.08	0.09	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.067708	NA	NA	0.099309	0.08815	NA	0.123	NA	3.803291
1272	5	109124793	109124793	A	G	intronic	MAN2A1	NA	NA	NA	intronic	ENSG00000112893	NA	NA	NA	NA	NA	5q21.3	NA	NA	NA	NA	rs17162238	0.06	0.06	0.065	0.0854633	0.0606	0.005	0.0403	0.177	0.1022	0.05	NA	0.06	0.15	0.0689	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.656464	NA	NA	0.067272	0.138182	NA	0.065	NA	3.803228
1272	1	42606766	42606766	T	A	intergenic	NONE,GUCA2B	dist=NONE;dist=12326	NA	NA	ncRNA_exonic	ENSG00000228776	NA	NA	NA	NA	NA	1p34.2	NA	NA	NA	NA	rs2203198	0.27	0.27	0.255	0.269169	0.1968	0.379	0.3012	0.2519	0.2311	0.19	0.37	0.24	0.26	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.35584	NA	NA	NA	NA	NA	0.341	NA	3.8032
1272	2	190682632	190682632	G	C	intronic	PMS1	NA	NA	NA	intronic	ENSG00000064933	NA	NA	NA	NA	NA	2q32.2	NA	NA	NA	NA	rs3791773	0.23	0.23	0.223	0.216054	0.1968	0.2192	0.2378	0.2905	0.1166	0.19	0.23	0.26	0.27	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.416903	NA	NA	NA	NA	NA	0.254	NA	3.8032
1272	3	171323305	171323305	T	C	intronic	PLD1	NA	NA	NA	intronic	ENSG00000075651	NA	NA	NA	NA	NA	3q26.31	NA	NA	NA	NA	rs2287578	0.14	0.14	0.141	0.160343	0.1968	0.131	0.1023	0.1256	0.2413	0.2	0.12	0.11	0.12	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.20767	NA	NA	NA	NA	NA	0.145	NA	3.8032
1272	6	24578272	24578272	G	A	intronic	KIAA0319	NA	NA	NA	intronic	ENSG00000137261	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs2760157	0.39	0.39	0.368	0.357827	0.1968	0.5437	0.3991	0.447	0.182	0.21	0.55	0.38	0.48	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.562477	NA	NA	NA	NA	ID=COSN167709;OCCURENCE=1(large_intestine)	0.377	NA	3.8032
1272	22	20030980	20030980	C	T	intronic	TANGO2	NA	NA	NA	intronic	ENSG00000183597	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs446388	0.06	0.06	0.07	0.0722843	0.0706	0.0764	0.0231	0.0635	0.1166	0.07	0.06	0.02	0.07	0.0646	0.076	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.378146	NA	NA	0.061744	0.064231	NA	0.058	NA	3.803056
1272	13	37593424	37593424	T	C	intronic	SUPT20H	NA	NA	NA	intronic	ENSG00000102710	NA	NA	NA	NA	NA	13q13.3	NA	NA	NA	NA	rs9566175	0.15	0.15	0.136	0.119409	0.1113	0.3442	0.1383	0.0038	0.0389	0.12	0.34	0.12	0.01	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.514979	NA	NA	0.085705	0.019509	NA	0.101	NA	3.802995
1272	1	146494510	146494510	T	C	ncRNA_exonic	LOC728989	NA	NA	NA	ncRNA_exonic	ENSG00000227242	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs11585592	0.31	0.31	0.275	0.335064	0.4732	0.2758	0.2723	0.3328	0.3016	0.41	0.24	0.28	0.28	0.3905	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.324068	NA	NA	NA	NA	NA	0.094	NA	3.8029666
1272	1	204948735	204948735	A	G	intronic	NFASC	NA	NA	NA	intronic	ENSG00000163531	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs6667633	0.08	0.08	0.077	0.0770767	0.0557	0.0089	0.0403	0.2035	0.0245	0.06	0.01	0.05	0.24	0.0648	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.302609	NA	NA	0.076601	0.205	NA	0.094	NA	3.802899
1272	1	38078300	38078300	A	G	UTR3	RSPO1	NM_001038633:c.*127T>C,NM_001242908:c.*127T>C,NM_001242909:c.*127T>C,NM_001242910:c.*127T>C	NA	NA	UTR3	ENSG00000169218	ENST00000401071:c.*127T>C,ENST00000356545:c.*127T>C,ENST00000401070:c.*127T>C,ENST00000373059:c.*127T>C,ENST00000401069:c.*127T>C,ENST00000401068:c.*127T>C	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	rs4652964	0.49	0.49	0.458	0.46865	0.5308	0.6766	0.5937	0.2148	0.4448	0.55	0.62	0.56	0.22	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.843603	NA	NA	NA	NA	NA	0.478	NA	3.8025334
1272	22	43032870	43032870	G	T	intronic	CYB5R3	NA	NA	NA	UTR5	ENSG00000100243	ENST00000407332:c.-66C>A	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs2285141	0.23	0.23	0.22	0.232827	0.1113	0.5933	0.1254	0.0915	0.2536	0.11	0.55	0.12	0.1	0.1574	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.206071	NA	NA	0.095698	0.090558	ID=COSN166772;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.094	NA	3.8022687
1272	16	66656147	66656147	T	C	intronic	CMTM4	NA	NA	NA	intronic	ENSG00000183723	NA	NA	NA	NA	NA	16q21	NA	NA	NA	NA	rs355947	0.07	0.07	0.058	0.0788738	0.0676	0.1121	0.1326	0.0061	0.1166	0.07	0.11	0.1	0.01	0.0839	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.317549	1.317549	NA	0.046279	0.015902	NA	0.058	NA	3.802221
1272	2	9558614	9558614	T	C	intronic	ITGB1BP1	NA	NA	NA	intronic	ENSG00000119185	NA	NA	NA	NA	NA	2p25.1	NA	NA	NA	NA	rs16867025	0.15	0.15	0.145	0.136581	0.1978	0.0169	0.1455	0.2201	0.0777	0.19	0.01	0.16	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.167166	NA	NA	NA	NA	NA	0.181	NA	3.8022
1272	4	146297424	146297424	G	C	intergenic	OTUD4,SMAD1	dist=196592;dist=105527	NA	NA	downstream	ENSG00000251333	NA	NA	NA	Score=385;Name=lod=49	NA	4q31.21	NA	NA	NA	NA	rs2044277	0.73	0.73	0.687	0.735823	0.6978	0.9246	0.7781	0.4962	0.8742	0.68	0.94	0.75	0.53	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.434078	NA	NA	NA	NA	NA	0.667	NA	3.8022
1272	6	29820170	29820170	G	C	intergenic	HLA-G,HLA-H	dist=21271;dist=35213	NA	NA	ncRNA_exonic	ENSG00000233265	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs9258606	0.16	0.16	0.111	0.189097	0.1978	0.2282	0.1182	0.0825	0.3344	0.2	0.18	0.11	0.09	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.439163	NA	NA	NA	NA	NA	0.196	NA	3.8022
1272	6	29820178	29820178	G	C	intergenic	HLA-G,HLA-H	dist=21279;dist=35205	NA	NA	ncRNA_exonic	ENSG00000233265	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs9258607	0.16	0.16	0.114	0.188898	0.1978	0.2272	0.1182	0.0825	0.3344	0.2	0.18	0.11	0.09	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.096279	NA	NA	NA	NA	NA	0.196	NA	3.8022
1272	10	17726573	17726573	A	G	intronic	STAM	NA	NA	NA	intronic	ENSG00000136738	NA	NA	NA	NA	NA	10p12.33	NA	NA	NA	NA	rs34875696	0.15	0.15	0.127	0.135583	0.1978	0.1895	0.1427	0.0545	0.1207	0.19	0.19	0.15	0.04	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.138715	NA	NA	NA	NA	NA	0.167	NA	3.8022
1272	5	147020419	147020419	T	C	ncRNA_intronic	JAKMIP2-AS1	NA	NA	NA	intronic	ENSG00000176049	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs1529686	0.33	0.33	0.306	0.342252	0.161	0.5982	0.3602	0.3162	0.2873	0.14	0.61	0.29	0.32	0.2325	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.478922	NA	NA	0.137674	0.28847	NA	0.29	NA	3.8021593
1272	20	12990044	12990044	T	C	intronic	SPTLC3	NA	NA	NA	intronic	ENSG00000172296	NA	NA	NA	NA	NA	20p12.1	NA	Name=CTCF,Rad21	Name=83	NA	rs3761895	0.55	0.55	0.489	0.551917	0.7485	0.5238	0.6585	0.1808	0.8047	0.74	0.58	0.62	0.17	0.6993	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.760019	2.760019	NA	0.750349	0.282796	NA	0.587	NA	3.801851
1272	17	71202431	71202431	G	A	intronic	COG1	NA	NA	NA	intronic	ENSG00000166685	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs77740419	0.04	0.04	0.04	0.0551118	0.0716	0.003	0.0706	0.0734	0.0562	0.06	NA	0.06	0.05	0.0597	0.067	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.53298	NA	NA	0.06686	0.065138	NA	0.051	NA	3.80184
1272	2	3624051	3624051	C	A	intronic	RPS7	NA	NA	NA	intronic	ENSG00000171863	NA	NA	NA	NA	NA	2p25.3	NA	NA	NA	NA	rs62106034	0.04	0.04	0.041	0.0593051	0.0636	0.0575	0.036	0.0197	0.1268	0.06	0.04	0.04	0.02	0.0648	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.474007	NA	NA	0.069946	0.033682	NA	0.065	NA	3.801654
1272	16	84495224	84495224	A	G	intronic	ATP2C2	NA	NA	NA	ncRNA_intronic	ENSG00000261286	NA	NA	NA	NA	NA	16q24.1	NA	NA	NA	NA	rs369750	0.41	0.41	0.36	0.391773	0.5318	0.3016	0.4294	0.3744	0.3374	0.53	0.27	0.46	0.33	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.90826	NA	NA	NA	NA	NA	0.457	NA	3.8015333
1272	9	136277480	136277480	A	G	exonic	REXO4	NA	synonymous SNV	REXO4:NM_020385:exon4:c.T849C:p.T283T	exonic	ENSG00000148300	NA	synonymous SNV	ENSG00000148300:ENST00000371942:exon4:c.T849C:p.T283T,ENSG00000148300:ENST00000453165:exon4:c.T804C:p.T268T	NA	NA	9q34.2	NA	NA	NA	NA	rs2285486	0.71	0.71	0.715	0.697883	0.6074	0.749	0.6268	0.8759	0.5481	0.6	0.76	0.64	0.87	0.6326	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.52808	NA	NA	0.625233	0.831366	NA	0.725	NA	3.8014336
1272	15	25926186	25926186	G	A	exonic	ATP10A	NA	synonymous SNV	ATP10A:NM_024490:exon18:c.C3528T:p.A1176A	exonic	ENSG00000206190	NA	synonymous SNV	ENSG00000206190:ENST00000356865:exon18:c.C3528T:p.A1176A	NA	NA	15q12	NA	NA	NA	NA	rs2076743	0.67	0.67	0.663	0.677915	0.6123	0.6121	0.7147	0.8094	0.6094	0.62	0.63	0.71	0.79	0.6345	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.543677	NA	NA	0.618605	0.800045	NA	0.725	NA	3.8012616
1272	5	65083865	65083865	A	G	intronic	NLN	NA	NA	NA	intronic	ENSG00000123213	NA	NA	NA	NA	NA	5q12.3	NA	NA	NA	NA	rs6862580	0.18	0.18	0.165	0.248403	0.1988	0.0933	0.2003	0.2504	0.4908	0.2	0.07	0.2	0.25	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.938358	NA	NA	NA	NA	NA	0.188	NA	3.8012
1272	8	19813667	19813667	T	G	intronic	LPL	NA	NA	NA	intronic	ENSG00000175445	NA	NA	NA	NA	NA	8p21.3	NA	NA	NA	NA	rs269	0.26	0.26	0.276	0.277955	0.1988	0.246	0.1988	0.4705	0.1881	0.19	0.23	0.2	0.45	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.342115	NA	NA	NA	NA	NA	0.246	NA	3.8012
1272	10	73578672	73578672	G	A	intronic	PSAP	NA	NA	NA	intronic	ENSG00000197746	NA	NA	NA	NA	NA	10q22.1	NA	NA	NA	NA	rs749823	0.21	0.21	0.2	0.206669	0.1988	0.2431	0.1585	0.2587	0.1411	0.2	0.22	0.14	0.27	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.407451	NA	NA	NA	NA	NA	0.217	NA	3.8012
1272	10	73581560	73581560	A	T	intronic	PSAP	NA	NA	NA	intronic	ENSG00000197746	NA	NA	NA	NA	NA	10q22.1	NA	NA	NA	NA	rs2070968	0.2	0.2	0.19	0.198682	0.1988	0.2431	0.1556	0.2284	0.1431	0.2	0.22	0.14	0.24	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.500248	NA	NA	NA	NA	NA	0.217	NA	3.8012
1272	11	73071263	73071263	T	C	intronic	ARHGEF17	NA	NA	NA	intronic	ENSG00000110237	NA	NA	NA	NA	NA	11q13.4	NA	NA	NA	NA	rs7131383	0.26	0.26	0.265	0.286542	0.1988	0.0456	0.1571	0.7148	0.138	0.2	0.05	0.15	0.68	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.035297	NA	NA	NA	NA	NA	0.355	NA	3.8012
1272	11	85623607	85623607	T	G	intronic	CCDC83	NA	NA	NA	intronic	ENSG00000150676	NA	NA	NA	NA	NA	11q14.2	NA	NA	NA	NA	rs11608136	0.24	0.24	0.219	0.228435	0.1988	0.373	0.2839	0.0681	0.2873	0.2	0.42	0.26	0.09	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.257052	NA	NA	NA	NA	ID=COSN164011;OCCURENCE=1(breast)	0.21	NA	3.8012
1272	11	130781475	130781475	C	G	intronic	SNX19	NA	NA	NA	intronic	ENSG00000120451	NA	NA	NA	NA	NA	11q24.3	NA	NA	NA	NA	rs3751038	0.14	0.14	0.133	0.127596	0.1988	0.1538	0.0893	0.0492	0.1605	0.2	0.17	0.1	0.05	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.739944	NA	NA	NA	NA	NA	0.217	NA	3.8012
1272	11	130781767	130781767	C	A	intronic	SNX19	NA	NA	NA	intronic	ENSG00000120451	NA	NA	NA	NA	NA	11q24.3	NA	NA	NA	NA	rs12420834	0.14	0.14	0.146	0.127596	0.1988	0.1538	0.0893	0.0492	0.1605	0.2	0.17	0.1	0.05	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.86597	NA	NA	NA	NA	NA	0.217	NA	3.8012
1272	14	24675569	24675569	A	G	intronic	TSSK4	NA	NA	NA	intronic	ENSG00000100926,ENSG00000139908,ENSG00000254692	NA	NA	NA	NA	NA	14q12	NA	NA	NA	NA	rs1242017	0.29	0.29	0.267	0.291733	0.1988	0.3016	0.1571	0.4433	0.2679	0.21	0.31	0.19	0.45	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.336788	NA	NA	NA	NA	NA	0.283	NA	3.8012
1272	16	89613233	89613233	A	C	intronic	SPG7	NA	NA	NA	intronic	ENSG00000197912	NA	NA	NA	NA	NA	16q24.3	NA	NA	NA	NA	rs461405	0.19	0.19	0.191	0.188898	0.1988	0.1518	0.1499	0.1929	0.2393	0.2	0.17	0.16	0.2	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.453603	NA	NA	NA	NA	NA	0.13	NA	3.8012
1272	19	5041049	5041049	C	T	intronic	KDM4B	NA	NA	NA	intronic	ENSG00000127663	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs11878982	0.11	0.11	0.097	0.0916534	0.1988	0.001	0.1513	0.0106	0.1421	0.21	0.0017	0.2	0.02	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.375966	NA	NA	NA	NA	NA	0.13	NA	3.8012
1272	7	6854506	6854506	C	T	intronic	CCZ1B	NA	NA	NA	intronic	ENSG00000146574	NA	NA	NA	NA	NA	7p22.1	NA	NA	NA	NA	rs138393587	0.04	0.04	0.045	0.0449281	0.0596	NA	0.0432	0.0772	0.0337	0.07	NA	0.05	0.04	0.06	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.149446	NA	NA	0.079823	0.070909	NA	0.007	NA	3.800577
1272	1	152976108	152976108	C	T	UTR3	SPRR3	NM_005416:c.*102C>T,NM_001097589:c.*102C>T	NA	NA	UTR3	ENSG00000163209	ENST00000331860:c.*102C>T,ENST00000295367:c.*102C>T	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs1015996	0.55	0.55	0.55	0.52496	0.5328	0.6319	0.4337	0.5	0.5051	0.53	0.66	0.48	0.52	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.115013	NA	NA	NA	NA	NA	0.464	NA	3.8005334
1272	1	152976114	152976114	G	C	UTR3	SPRR3	NM_005416:c.*108G>C,NM_001097589:c.*108G>C	NA	NA	UTR3	ENSG00000163209	ENST00000331860:c.*108G>C,ENST00000295367:c.*108G>C	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs1015995	0.55	0.55	0.567	0.52496	0.5328	0.6319	0.4337	0.5	0.5051	0.53	0.66	0.48	0.52	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.154646	NA	NA	NA	NA	NA	0.464	NA	3.8005334
1272	15	45445499	45445499	G	C	intronic	DUOX1	NA	NA	NA	ncRNA_intronic	ENSG00000259539	NA	NA	NA	NA	NA	15q21.1	NA	NA	NA	NA	rs1648304	0.27	0.27	0.24	0.242412	0.5328	0.0754	0.3141	0.0628	0.3078	0.54	0.03	0.36	0.07	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.275552	NA	NA	NA	NA	NA	0.319	NA	3.8005333
1272	4	155489085	155489085	A	G	intronic	FGB	NA	NA	NA	intronic	ENSG00000171564	NA	NA	NA	NA	NA	4q31.3	NA	NA	NA	NA	rs2227411	0.16	0.16	0.131	0.137979	0.1998	0.2242	0.147	0.0189	0.1401	0.21	0.18	0.2	0.02	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.217882	NA	NA	NA	NA	NA	0.138	NA	3.8002
1272	10	96731788	96731788	A	G	intronic	CYP2C9	NA	NA	NA	intronic	ENSG00000138109	NA	NA	NA	NA	NA	10q23.33	NA	NA	NA	NA	rs9332172	0.18	0.18	0.178	0.18111	0.1998	0.0873	0.1542	0.2716	0.1554	0.18	0.09	0.2	0.27	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.580903	NA	NA	NA	NA	NA	0.21	NA	3.8002
1272	20	25193849	25193849	C	A	intronic	ENTPD6	NA	NA	NA	intronic	ENSG00000197586	NA	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	rs6115089	0.09	0.09	0.074	0.111222	0.0507	0.0139	0.2003	0.1331	0.181	0.06	0.01	0.18	0.15	0.095	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.006518	NA	NA	0.054302	0.11507	NA	0.138	NA	3.799998
1272	12	133437981	133437981	A	C	intronic	CHFR	NA	NA	NA	intronic	ENSG00000072609	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs12578891	0.14	0.14	0.11	0.142971	0.2008	0.1171	0.2522	0.0098	0.2127	0.21	0.1	0.23	0.01	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.211788	NA	NA	NA	NA	ID=COSN164421;OCCURENCE=1(breast)	0.072	NA	3.7992
1272	22	42339516	42339516	A	G	intronic	CENPM	NA	NA	NA	intronic	ENSG00000100162	NA	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs3752591	0.24	0.24	0.225	0.267372	0.2008	0.123	0.4409	0.2935	0.3262	0.2	0.13	0.42	0.32	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.570831	NA	NA	NA	NA	NA	0.275	NA	3.7992
1272	8	144877546	144877546	C	T	intronic	SCRIB	NA	NA	NA	intronic	ENSG00000180900	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs115359803	0.04	0.04	0.041	0.0333466	0.0656	0.0248	0.0418	0.0151	0.0276	0.07	0.02	0.06	0.02	0.0597	0.087	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.065331	NA	NA	0.075617	0.022717	NA	0.08	NA	3.799083
1272	5	181660	181660	T	G	exonic	PLEKHG4B	NA	synonymous SNV	PLEKHG4B:NM_052909:exon17:c.T3366G:p.G1122G	exonic	ENSG00000153404	NA	synonymous SNV	ENSG00000153404:ENST00000283426:exon17:c.T3366G:p.G1122G	NA	NA	5p15.33	NA	NA	NA	NA	rs7717970	0.43	0.43	0.42	0.439097	0.6312	0.2589	0.4784	0.2935	0.5961	0.63	0.26	0.5	0.27	0.5746	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.918799	NA	NA	0.661977	0.360418	NA	0.514	NA	3.7988896
1272	15	20874721	20874721	G	T	downstream	NBEAP1	NA	NA	NA	ncRNA_intronic	ENSG00000258590	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs12442500	NA	NA	0.279	0.346246	0.3678	0.3929	0.3977	0.23	0.3967	NA	NA	NA	NA	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.597437	NA	NA	NA	NA	NA	0.196	NA	3.7988666
1272	11	121425851	121425851	C	T	intronic	SORL1	NA	NA	NA	intronic	ENSG00000137642	NA	NA	NA	NA	NA	11q24.1	NA	NA	NA	NA	rs77361418	0.05	0.05	0.051	0.0640974	0.0586	0.004	0.0548	0.0908	0.1022	0.07	NA	0.04	0.09	0.0698	0.096	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.632952	NA	NA	0.072924	0.096232	NA	0.043	NA	3.798676
1272	9	79014170	79014170	T	C	ncRNA_exonic	RPSAP9	NA	NA	NA	ncRNA_exonic	ENSG00000234618	NA	NA	NA	Score=810;Name=lod=2616	NA	9q21.13	NA	NA	NA	NA	rs7036849	0.88	0.88	0.916	0.89397	0.9314	0.998	0.9524	0.7254	0.9346	0.89	0.97	0.92	0.75	0.9366	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.044073	NA	NA	NA	NA	NA	0.725	NA	3.7986666
1272	12	120541597	120541597	G	A	intronic	RAB35	NA	NA	NA	intronic	ENSG00000111737	NA	NA	NA	NA	NA	12q24.23	NA	NA	NA	NA	rs73217390	0.03	0.03	0.037	0.0289537	0.0726	0.001	0.0274	0.0045	0.047	0.07	NA	0.02	0.01	0.0548	0.074	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.649836	NA	NA	0.073953	0.01317	NA	0.065	NA	3.798647
1272	7	123256643	123256643	G	T	intronic	ASB15	NA	NA	NA	ncRNA_intronic	ENSG00000230442	NA	NA	NA	NA	NA	7q31.32	NA	NA	NA	NA	rs6963354	0.54	0.54	0.523	0.517372	0.5348	0.6974	0.4928	0.3563	0.5491	0.55	0.68	0.53	0.34	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.407122	NA	NA	NA	NA	NA	0.406	NA	3.7985333
1272	6	36945938	36945938	C	T	intronic	MTCH1	NA	NA	NA	intronic	ENSG00000137409	NA	NA	NA	NA	NA	6p21.2	NA	NA	NA	NA	rs61748598	0.11	0.11	0.096	NA	NA	NA	NA	NA	NA	0.08	0.04	0.11	0.26	0.1072	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.065323	NA	NA	0.094535	0.211757	NA	0.145	NA	3.798265
1272	13	28270714	28270714	T	C	intergenic	POLR1D,GSX1	dist=29155;dist=96066	NA	NA	ncRNA_exonic	ENSG00000226703	NA	NA	NA	NA	NA	13q12.2	NA	NA	NA	NA	rs35453017	0.17	0.17	0.155	0.144369	0.2018	0.2431	0.1124	0.0734	0.1022	0.2	0.26	0.13	0.05	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.512206	NA	NA	NA	NA	NA	0.21	NA	3.7982
1272	13	28270989	28270989	A	C	intergenic	POLR1D,GSX1	dist=29430;dist=95791	NA	NA	ncRNA_exonic	ENSG00000226703	NA	NA	NA	NA	NA	13q12.2	NA	NA	NA	NA	rs61944113	0.17	0.17	0.16	0.144569	0.2018	0.244	0.1124	0.0734	0.1022	0.2	0.26	0.13	0.05	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.049532	NA	NA	NA	NA	NA	0.21	NA	3.7982
1272	19	2109019	2109019	T	C	intronic	AP3D1	NA	NA	NA	intronic	ENSG00000065000	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs2072306	0.32	0.32	0.32	0.326677	0.2018	0.3343	0.2075	0.4894	0.3119	0.19	0.38	0.22	0.52	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.566138	NA	NA	NA	NA	NA	0.29	NA	3.7982
1272	18	43669980	43669980	T	C	intronic	ATP5A1	NA	NA	NA	intronic	ENSG00000152234	NA	NA	NA	NA	NA	18q21.1	NA	NA	Name=3	NA	rs2298787	0.28	0.28	0.272	0.315895	0.3917	0.0635	0.317	0.3669	0.4284	0.39	0.05	0.31	0.36	0.3816	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.680927	NA	NA	0.428605	0.373581	NA	0.478	NA	3.798095
1272	16	50642201	50642201	G	C	intronic	NKD1	NA	NA	NA	ncRNA_exonic	ENSG00000205414	NA	NA	NA	Score=369;Name=lod=42	NA	16q12.1	NA	NA	NA	NA	rs933566	0.69	0.69	0.696	0.735024	0.4523	0.9881	0.6484	0.7859	0.7577	0.45	0.99	0.59	0.77	0.5991	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.168341	NA	NA	0.484302	0.724295	NA	0.645	NA	3.7976313
1272	7	141957424	141957424	G	A	intronic	PRSS58	NA	NA	NA	intronic	ENSG00000258223	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs12531935	0.18	0.18	0.174	0.20008	0.1034	0.1429	0.2565	0.3366	0.1339	0.09	0.14	0.26	0.31	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.533263	NA	NA	0.098994	0.348266	NA	0.261	NA	3.797606
1272	8	134050678	134050678	A	G	UTR3	SLA	NM_001045556:c.*91T>C,NM_006748:c.*91T>C,NM_001045557:c.*91T>C	NA	NA	UTR3	ENSG00000155926	ENST00000338087:c.*91T>C,ENST00000427060:c.*91T>C,ENST00000395352:c.*91T>C,ENST00000524345:c.*91T>C,ENST00000517648:c.*91T>C	NA	NA	NA	NA	8q24.22	NA	NA	NA	NA	rs3739266	0.43	0.43	0.43	0.407149	0.5358	0.1825	0.3703	0.5802	0.2986	0.54	0.18	0.41	0.59	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.800107	NA	NA	NA	NA	ID=COSN168438;OCCURENCE=1(large_intestine)	0.464	NA	3.7975334
1272	7	29952207	29952207	C	G	intronic	WIPF3	NA	NA	NA	ncRNA_exonic	ENSG00000238906	NA	NA	NA	NA	NA	7p14.3	NA	NA	NA	NA	rs6462187	0.49	0.49	0.457	0.51877	0.5358	0.746	0.5735	0.1868	0.6769	0.54	0.7	0.54	0.15	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.099996	NA	NA	NA	NA	NA	0.493	NA	3.7975333
1272	17	7346302	7346302	T	C	intronic	FGF11	NA	NA	NA	ncRNA_exonic	ENSG00000262880	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs3853818	0.34	0.34	0.322	0.319289	0.5358	0.0248	0.3314	0.3328	0.3732	0.54	0.03	0.38	0.34	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.352245	NA	NA	NA	NA	ID=COSN165318;OCCURENCE=1(breast)	0.377	NA	3.7975333
1272	10	27449991	27449991	G	C	intronic	MASTL	NA	NA	NA	intronic	ENSG00000120539	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs12572707	0.1	0.1	0.094	0.111821	0.0656	0.1528	0.0432	0.087	0.1994	0.06	0.2	0.05	0.07	0.0849	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.057827	NA	NA	0.052209	0.091012	NA	0.08	NA	3.797291
1272	15	93588969	93588969	G	A	intronic	RGMA	NA	NA	NA	intronic	ENSG00000182175	NA	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs67584445	0.04	0.04	0.051	0.0527157	0.0616	0.0099	0.0461	0.0628	0.0787	0.06	0.01	0.05	0.06	0.0672	0.098	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.187298	NA	NA	0.073995	0.059411	NA	0.109	NA	3.797205
1272	4	165577648	165577648	A	G	ncRNA_intronic	MIR5684	NA	NA	NA	intergenic	ENSG00000223037,ENSG00000248162	dist=35659;dist=68814	NA	NA	NA	NA	4q32.3	NA	NA	NA	NA	rs12644648	0.25	0.25	0.201	0.214457	0.2028	0.5536	0.1801	0.031	0.1493	0.2	0.56	0.2	0.02	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.329344	NA	NA	NA	NA	NA	0.167	NA	3.7972
1272	4	165578100	165578100	G	A	ncRNA_intronic	MIR5684	NA	NA	NA	intergenic	ENSG00000223037,ENSG00000248162	dist=36111;dist=68362	NA	NA	NA	NA	4q32.3	NA	NA	NA	NA	rs12651422	0.25	0.25	0.22	0.214257	0.2028	0.5526	0.1801	0.031	0.1493	0.2	0.56	0.2	0.02	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.856207	NA	NA	NA	NA	NA	0.174	NA	3.7972
1272	4	165578266	165578266	T	C	ncRNA_intronic	MIR5684	NA	NA	NA	intergenic	ENSG00000223037,ENSG00000248162	dist=36277;dist=68196	NA	NA	NA	NA	4q32.3	NA	NA	NA	NA	rs72696006	0.25	0.25	0.203	0.214457	0.2028	0.5536	0.1801	0.031	0.1493	0.2	0.56	0.2	0.02	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.722735	NA	NA	NA	NA	NA	0.174	NA	3.7972
1272	4	165578389	165578389	A	G	ncRNA_intronic	MIR5684	NA	NA	NA	intergenic	ENSG00000223037,ENSG00000248162	dist=36400;dist=68073	NA	NA	NA	NA	4q32.3	NA	NA	NA	NA	rs55762923	0.25	0.25	0.22	0.214457	0.2028	0.5536	0.1801	0.031	0.1493	0.2	0.56	0.2	0.02	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.809162	NA	NA	NA	NA	NA	0.174	NA	3.7972
1272	4	165578827	165578827	T	C	ncRNA_intronic	MIR5684	NA	NA	NA	intergenic	ENSG00000223037,ENSG00000248162	dist=36838;dist=67635	NA	NA	NA	NA	4q32.3	NA	NA	NA	NA	rs1852764	0.25	0.25	0.21	0.214856	0.2028	0.5546	0.1801	0.0318	0.1493	0.2	0.56	0.2	0.03	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.75612	NA	NA	NA	NA	NA	0.181	NA	3.7972
1272	16	1815337	1815337	G	A	intronic	MAPK8IP3	NA	NA	NA	intronic	ENSG00000138834	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs2917508	0.24	0.24	0.233	0.23103	0.2028	0.3571	0.121	0.1467	0.3221	0.21	0.38	0.14	0.18	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.228159	NA	NA	NA	NA	NA	0.152	NA	3.7972
1272	20	34571846	34571846	T	C	intronic	CNBD2	NA	NA	NA	intronic	ENSG00000149646	NA	NA	NA	NA	NA	20q11.23	NA	NA	NA	NA	rs6058388	0.28	0.28	0.3	0.360024	0.2028	0.3075	0.2046	0.5212	0.4683	0.2	0.25	0.25	0.49	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.691844	NA	NA	NA	NA	NA	0.232	NA	3.7972
1272	20	44569930	44569930	C	T	intronic	PCIF1	NA	NA	NA	intronic	ENSG00000100982	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs6065908	0.1	0.1	0.093	0.113419	0.2028	0.0238	0.1009	0.0182	0.2515	0.2	0.02	0.12	0.03	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.937888	NA	NA	NA	NA	NA	0.072	NA	3.7972
1272	16	3712853	3712853	A	G	intronic	TRAP1	NA	NA	NA	intronic	ENSG00000126602,ENSG00000213918	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs34157278	0.03	0.03	0.018	0.0329473	0.0686	NA	0.0216	0.0045	0.0767	0.06	NA	0.02	0.01	0.0623	0.072	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.124971	NA	NA	0.071977	0.013427	NA	0.022	NA	3.797123
1272	19	39759918	39759918	T	G	intronic	IFNL2	NA	NA	NA	intronic	ENSG00000183709	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs62120533	0.08	0.08	0.06	0.0842652	0.0616	0.1052	0.0605	0.1059	0.0736	0.05	0.08	0.07	0.14	0.0784	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.467143	NA	NA	0.062996	0.09322	NA	0.087	NA	3.797004
1272	5	125971699	125971699	C	T	intronic	C5orf48	NA	NA	NA	intronic	ENSG00000196900	NA	NA	NA	NA	NA	5q23.2	NA	NA	NA	NA	rs7705714	0.16	0.16	0.175	0.171126	0.0606	0.1458	0.0735	0.4365	0.0215	0.05	0.14	0.09	0.39	0.0881	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.373297	NA	NA	0.054419	0.368815	NA	0.275	NA	3.796881
1272	13	60590307	60590307	C	T	ncRNA_intronic	DIAPH3-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000227528	NA	NA	NA	NA	NA	13q21.2	NA	NA	NA	NA	rs12429010	0.18	0.18	0.139	0.167133	0.2972	0.003	0.3847	0.059	0.1943	0.29	0.01	0.36	0.06	0.2685	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.240565	NA	NA	0.304268	0.092236	NA	0.232	NA	3.7966986
1272	22	22316631	22316631	G	A	intronic	TOP3B	NA	NA	NA	UTR3	ENSG00000100038	ENST00000413067:c.*33C>T	NA	NA	NA	NA	22q11.22	NA	NA	NA	NA	rs239915	0.14	0.14	0.156	0.13758	0.1849	NA	0.1484	0.2511	0.0695	0.17	0.0017	0.17	0.25	0.1851	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.430232	NA	NA	NA	NA	NA	0.217	NA	3.7966667
1272	15	67921174	67921174	G	A	intronic	MAP2K5	NA	NA	NA	ncRNA_exonic	ENSG00000259512	NA	NA	NA	NA	NA	15q23	NA	NA	NA	NA	rs8025889	0.62	0.62	0.596	0.6252	0.5368	0.7946	0.6398	0.4841	0.7219	0.54	0.79	0.64	0.5	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.139933	NA	NA	NA	NA	NA	0.623	NA	3.7965333
1272	7	75991425	75991425	G	A	intergenic	YWHAG,SRCRB4D	dist=3083;dist=27221	NA	NA	ncRNA_exonic	ENSG00000213548	NA	NA	NA	NA	NA	7q11.23	NA	NA	NA	NA	rs62476792	0.2	0.2	0.153	0.197684	0.2038	0.3105	0.3127	0.0076	0.2505	0.21	0.29	0.28	0.01	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.316037	NA	NA	NA	NA	NA	0.116	NA	3.7962
1272	2	128375821	128375821	G	C	intronic	MYO7B	NA	NA	NA	intronic	ENSG00000169994	NA	NA	NA	NA	NA	2q14.3	NA	NA	NA	NA	rs13393706	0.15	0.15	0.151	0.171526	0.2038	0.1438	0.1239	0.1256	0.2628	0.19	0.12	0.14	0.14	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.388567	NA	NA	NA	NA	NA	0.196	NA	3.7962
1272	3	130715415	130715415	T	G	intronic	ATP2C1	NA	NA	NA	intronic	ENSG00000017260	NA	NA	NA	NA	NA	3q22.1	NA	NA	NA	NA	rs17282299	0.13	0.13	0.129	0.139177	0.2038	0.0437	0.1282	0.1142	0.2127	0.19	0.05	0.13	0.14	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.301851	NA	NA	NA	NA	NA	0.203	NA	3.7962
1272	4	121961279	121961279	A	T	intronic	NDNF	NA	NA	NA	intronic	ENSG00000173376	NA	NA	NA	NA	NA	4q27	NA	NA	NA	NA	rs3775915	0.2	0.2	0.166	0.227835	0.2038	0.2351	0.3386	0.1089	0.3272	0.22	0.22	0.3	0.08	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.144811	NA	NA	NA	NA	NA	0.167	NA	3.7962
1272	5	151777789	151777789	G	A	intronic	NMUR2	NA	NA	NA	intronic	ENSG00000132911	NA	NA	NA	NA	NA	5q33.1	NA	NA	NA	NA	rs958955	0.11	0.11	0.088	0.124201	0.2038	0.0258	0.2954	0.0174	0.1667	0.18	0.03	0.23	0.01	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.537136	NA	NA	NA	NA	NA	NA	NA	3.7962
1272	5	151777790	151777790	C	T	intronic	NMUR2	NA	NA	NA	intronic	ENSG00000132911	NA	NA	NA	NA	NA	5q33.1	NA	NA	NA	NA	rs1363423	0.11	0.11	0.085	0.122804	0.2038	0.0258	0.2954	0.0121	0.1667	0.17	0.03	0.23	0.01	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.203412	NA	NA	NA	NA	NA	NA	NA	3.7962
1272	7	106851754	106851754	T	C	intronic	COG5	NA	NA	NA	intronic	ENSG00000164597	NA	NA	NA	NA	NA	7q22.3	NA	NA	NA	NA	rs1018946	0.14	0.14	0.136	0.130192	0.2038	0.1597	0.121	0.0144	0.1871	0.21	0.15	0.14	0.02	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.571799	NA	NA	NA	NA	NA	0.058	NA	3.7962
1272	10	115343852	115343852	C	G	intronic	HABP2	NA	NA	NA	intronic	ENSG00000148702	NA	NA	NA	NA	NA	10q25.3	NA	NA	NA	NA	rs911700	0.28	0.28	0.266	0.304113	0.2038	0.3988	0.2392	0.3086	0.3497	0.19	0.39	0.26	0.29	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.124061	NA	NA	NA	NA	NA	0.254	NA	3.7962
1272	13	25399702	25399702	C	A	intronic	RNF17	NA	NA	NA	intronic	ENSG00000132972	NA	NA	NA	NA	NA	13q12.12	NA	NA	NA	NA	rs9553451	0.18	0.18	0.193	0.214856	0.2038	0.0823	0.1427	0.2753	0.3323	0.19	0.09	0.18	0.28	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.282413	2.282413	NA	NA	NA	NA	0.217	NA	3.7962
1272	14	73973364	73973364	A	G	intronic	HEATR4	NA	NA	NA	intronic	ENSG00000187105	NA	NA	NA	NA	NA	14q24.3	NA	NA	NA	NA	rs35842680	0.1	0.1	0.09	0.0625	0.2038	0.004	0.0865	0.0113	0.0297	0.24	0.01	0.09	0.02	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.544324	3.544324	NA	NA	NA	NA	0.08	NA	3.7962
1272	19	2405262	2405262	C	G	intronic	TMPRSS9	NA	NA	NA	intronic	ENSG00000178297	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs12975324	0.11	0.11	0.105	0.0902556	0.2038	0.0347	0.1571	0.0174	0.0818	0.19	0.02	0.18	0.02	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.818895	NA	NA	NA	NA	NA	0.181	NA	3.7962
1272	20	62599357	62599357	C	T	intronic	ZNF512B	NA	NA	NA	intronic	ENSG00000196700	NA	NA	NA	NA	NA	20q13.33	NA	NA	NA	NA	rs56015416	0.11	0.11	0.105	0.102835	0.2038	0.003	0.1556	0.0507	0.135	0.21	0.0017	0.17	0.04	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.328698	NA	NA	NA	NA	NA	0.058	NA	3.7962
1272	7	99580907	99580907	C	G	ncRNA_exonic	AZGP1P1	NA	NA	NA	ncRNA_exonic	ENSG00000214313	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs2301806	0.42	0.42	0.378	0.38758	0.4115	0.6488	0.4914	0.112	0.3926	0.42	0.67	0.43	0.12	0.4595	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.162802	NA	0	NA	NA	NA	0.377	NA	3.7956666
1272	17	18882214	18882214	G	A	intronic	FAM83G,SLC5A10	NA	NA	NA	intronic	ENSG00000154025,ENSG00000188522	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs2074271	0.11	0.11	0.083	0.148962	0.0586	0.2153	0.0461	0.0938	0.3211	0.04	0.24	0.05	0.1	0.1004	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.924091	NA	NA	0.045389	0.067386	NA	0.08	NA	3.795611
1272	17	20163616	20163616	C	T	intronic	SPECC1	NA	NA	NA	ncRNA_intronic	ENSG00000263494	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs11868429	0.22	0.22	0.249	0.242612	0.172	0.1012	0.1931	0.4909	0.1605	0.18	0.09	0.15	0.49	0.1858	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.69796	NA	NA	0.18	0.450068	NA	0.312	NA	3.7955333
1272	5	178373319	178373319	G	C	intronic	ZNF454	NA	NA	NA	intronic	ENSG00000178187	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs56954828	0.12	0.12	0.127	0.116414	0.0755	0.123	0.0663	0.2269	0.0378	0.07	0.11	0.08	0.23	0.0723	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.513122	NA	NA	0.05686	0.189741	NA	0.13	NA	3.79534
1272	3	184295316	184295316	C	T	intronic	EPHB3	NA	NA	NA	intronic	ENSG00000145191,ENSG00000182580	NA	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs7644377	0.2	0.2	0.213	0.202476	0.2048	0.0079	0.1729	0.4599	0.0736	0.19	0.01	0.2	0.46	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.688259	NA	NA	NA	NA	NA	0.254	NA	3.7952
1272	17	20897623	20897623	G	A	intergenic	CCDC144NL,USP22	dist=98170;dist=5283	NA	NA	ncRNA_intronic	ENSG00000233098	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs12602058	0.18	0.18	0.19	0.190895	0.2048	0.2768	0.2133	0.0106	0.316	0.21	0.28	0.2	0.02	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.321138	NA	NA	NA	NA	NA	0.196	NA	3.7952
1272	19	56459703	56459703	A	G	intronic	NLRP8	NA	NA	NA	intronic	ENSG00000179709	NA	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs1436077	0.22	0.22	0.195	0.224441	0.2048	0.1855	0.2695	0.2413	0.2301	0.21	0.19	0.27	0.25	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.170223	NA	NA	NA	NA	NA	0.167	NA	3.7952
1272	21	43248432	43248432	C	G	intronic	PRDM15	NA	NA	NA	intronic	ENSG00000141956	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs28528855	0.29	0.29	0.281	0.297324	0.2048	0.3234	0.2277	0.3691	0.318	0.19	0.35	0.22	0.4	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.433842	NA	NA	NA	NA	NA	0.326	NA	3.7952
1272	12	32793164	32793164	A	G	intronic	FGD4	NA	NA	NA	intronic	ENSG00000139132	NA	NA	NA	NA	NA	12p11.21	NA	NA	NA	NA	rs74073032	0.07	0.07	0.065	0.0609026	0.0835	0.0903	0.0389	0.0477	0.0409	0.08	0.08	0.04	0.05	0.0597	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.299926	NA	NA	0.061744	0.042442	NA	0.036	NA	3.795056
1273	6	145148407	145148407	C	T	intronic	UTRN	NA	NA	NA	intronic	ENSG00000152818	NA	NA	NA	NA	NA	6q24.2	NA	NA	NA	NA	rs2297845	0.19	0.19	0.197	0.191094	0.0964	0.4395	0.1138	0.0666	0.2556	0.11	0.45	0.13	0.07	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.434211	NA	NA	0.108737	0.053468	NA	0.094	NA	3.794863
1273	12	85261005	85261005	T	C	intronic	SLC6A15	NA	NA	NA	intronic	ENSG00000072041	NA	NA	NA	NA	NA	12q21.31	NA	NA	NA	NA	rs79714331	0.04	0.04	0.032	0.0265575	0.0815	NA	0.062	0.0015	0.0061	0.09	NA	0.07	NA	0.0473	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.453235	NA	NA	0.076449	0.016356	NA	0.022	NA	3.794751
1273	5	181762	181762	A	G	exonic	PLEKHG4B	NA	synonymous SNV	PLEKHG4B:NM_052909:exon17:c.A3468G:p.R1156R	exonic	ENSG00000153404	NA	synonymous SNV	ENSG00000153404:ENST00000283426:exon17:c.A3468G:p.R1156R	NA	NA	5p15.33	NA	NA	NA	NA	rs11133847	0.43	0.43	0.413	0.435503	0.6332	0.2579	0.4798	0.2685	0.6094	0.63	0.26	0.51	0.25	0.5757	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.08207	NA	NA	0.663256	0.33931	NA	0.5	NA	3.7945106
1273	8	62479925	62479925	T	A	intronic	ASPH	NA	NA	NA	intronic	ENSG00000198363	NA	NA	NA	NA	NA	8q12.3	NA	NA	NA	NA	rs61226013	0.13	0.13	0.137	0.129193	0.0636	0.246	0.0937	0.1573	0.0634	0.05	0.26	0.07	0.16	0.0841	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.201933	NA	NA	0.057907	0.146391	NA	0.116	NA	3.794393
1273	9	137804360	137804360	A	G	exonic	FCN1	NA	synonymous SNV	FCN1:NM_002003:exon7:c.T570C:p.N190N	exonic	ENSG00000085265	NA	synonymous SNV	ENSG00000085265:ENST00000371806:exon7:c.T570C:p.N190N	NA	NA	9q34.3	NA	NA	NA	NA	rs2274845	0.62	0.62	0.661	0.667332	0.6213	0.4673	0.4654	0.91	0.7362	0.63	0.49	0.45	0.9	0.6271	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.526365	NA	NA	0.623953	0.865411	NA	0.688	NA	3.7943136
1273	6	32610349	32610349	C	A	intronic	HLA-DQA1	NA	NA	NA	intronic	ENSG00000196735	NA	NA	NA	NA	NA	6p21.32	NA	Name=Pol2-4H8	NA	NA	rs9272780	0.42	0.42	0.425	0.422724	0.3956	0.5437	0.4726	0.2731	0.4928	0.41	0.57	0.44	0.28	0.4207	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.97088	NA	NA	0.389443	0.298542	NA	0.471	NA	3.794257
1273	21	22790919	22790919	G	A	intronic	NCAM2	NA	NA	NA	intronic	ENSG00000154654	NA	NA	NA	NA	NA	21q21.1	NA	NA	NA	NA	rs10470112	0.12	0.12	0.116	0.11262	0.0666	0.1627	0.1023	0.1672	0.0419	0.07	0.15	0.08	0.19	0.0764	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.207312	NA	NA	0.062775	0.137137	NA	0.101	NA	3.794225
1273	1	76771495	76771495	G	C	intronic	ST6GALNAC3	NA	NA	NA	intronic	ENSG00000184005	NA	NA	NA	NA	NA	1p31.1	NA	NA	NA	NA	rs11162118	0.26	0.26	0.215	0.256589	0.2058	0.4444	0.2781	0.0968	0.316	0.21	0.44	0.28	0.1	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.289751	NA	NA	NA	NA	NA	0.188	NA	3.7942
1273	1	205041542	205041542	T	C	intronic	CNTN2	NA	NA	NA	intronic	ENSG00000184144	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs3903399	0.27	0.27	0.241	0.269369	0.2058	0.4335	0.3055	0.146	0.3067	0.21	0.44	0.31	0.13	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.513907	1.513907	NA	NA	NA	NA	0.174	NA	3.7942
1273	2	71801564	71801564	G	A	intronic	DYSF	NA	NA	NA	intronic	ENSG00000135636	NA	NA	NA	NA	NA	2p13.2	NA	NA	NA	NA	rs75127120	0.22	0.22	0.207	0.160543	0.2058	0.3393	0.1729	0.056	0.0624	0.21	0.37	0.2	0.06	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.331748	NA	NA	NA	NA	NA	0.13	NA	3.7942
1273	7	150209741	150209741	T	A	intergenic	GIMAP8,GIMAP7	dist=33258;dist=2204	NA	NA	ncRNA_exonic	ENSG00000213205	NA	NA	NA	NA	NA	7q36.1	NA	NA	NA	NA	rs4529373	0.2	0.2	0.219	0.248602	0.2058	0.0655	0.1571	0.4319	0.2986	0.2	0.05	0.18	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.800124	NA	NA	NA	NA	NA	0.297	NA	3.7942
1273	17	76506665	76506665	T	C	intronic	DNAH17	NA	NA	NA	intronic	ENSG00000187775	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs2376586	0.26	0.26	0.251	0.213458	0.2058	0.3571	0.1585	0.2194	0.1043	0.22	0.36	0.18	0.26	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.819639	NA	NA	NA	NA	NA	0.196	NA	3.7942
1273	9	130605348	130605348	C	A	intronic	ENG	NA	NA	NA	intronic	ENSG00000106991	NA	NA	NA	NA	NA	9q34.11	NA	NA	NA	NA	rs7847860	0.05	0.05	0.049	0.0648962	0.0706	0.002	0.0403	0.0787	0.1227	0.08	0.0017	0.04	0.07	0.0666	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.240713	NA	NA	0.068721	0.05833	NA	0.058	NA	3.794079
1273	2	73675844	73675844	C	T	exonic	ALMS1	NA	synonymous SNV	ALMS1:NM_015120:exon8:c.C2187T:p.F729F	exonic	ENSG00000116127	NA	synonymous SNV	ENSG00000116127:ENST00000409009:exon7:c.C2061T:p.F687F,ENSG00000116127:ENST00000264448:exon8:c.C2187T:p.F729F,ENSG00000116127:ENST00000377715:exon8:c.C2187T:p.F729F	NA	NA	2p13.1	NA	NA	NA	NA	rs7598901	0.54	0.54	0.479	0.526358	0.6491	0.7798	0.562	0.1021	0.6871	0.64	0.75	0.59	0.09	0.5991	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.261176	NA	NA	0.624422	0.209071	NA	0.464	NA	3.7940446
1273	10	50686554	50686554	G	A	intronic	ERCC6	NA	NA	NA	intronic	ENSG00000225830	NA	NA	NA	NA	NA	10q11.23	NA	NA	NA	NA	rs11101139	0.04	0.04	0.024	0.0251597	0.0676	NA	0.0576	0.0038	0.0133	0.07	NA	0.07	0.0041	0.0542	0.084	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.445313	NA	NA	0.084302	0.01498	NA	0.022	NA	3.793898
1273	1	204006538	204006538	T	C	ncRNA_intronic	LINC00303	NA	NA	NA	ncRNA_exonic	ENSG00000176754	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs4951291	0.9	0.9	0.899	0.895567	0.8728	0.8016	0.951	0.9917	0.8466	0.88	0.81	0.95	0.99	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.447339	NA	0.48	NA	NA	NA	0.804	NA	3.7938666
1273	4	189061823	189061823	G	A	intronic	TRIML1	NA	NA	NA	intronic	ENSG00000184108	NA	NA	NA	NA	NA	4q35.2	NA	NA	NA	NA	rs62354297	0.11	0.11	0.095	0.0980431	0.0666	0.1925	0.0807	0.0643	0.091	0.06	0.22	0.09	0.07	0.0792	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.379083	NA	NA	0.060581	0.057649	ID=COSN167390;OCCURENCE=1(large_intestine)	0.072	NA	3.793619
1273	19	5645444	5645444	G	A	intronic	SAFB	NA	NA	NA	intronic	ENSG00000160633	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs2436502	0.05	0.05	0.034	0.0547125	0.0636	0.0179	0.0562	0.0204	0.1288	0.07	0.02	0.08	0.02	0.076	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.027833	NA	NA	0.066806	0.023182	NA	0.036	NA	3.793594
1273	1	111857107	111857107	A	G	intronic	CHIA	NA	NA	NA	intronic	ENSG00000134216	NA	NA	NA	NA	NA	1p13.2	NA	NA	NA	NA	rs56003810	0.11	0.11	0.1	0.129593	0.0984	0.0933	0.0807	0.1936	0.1472	0.08	0.09	0.09	0.17	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.033251	NA	NA	0.108108	0.165462	NA	0.167	NA	3.793492
1273	3	32491084	32491084	T	C	intronic	CMTM7	NA	NA	NA	intronic	ENSG00000153551	NA	NA	NA	NA	NA	3p22.3	NA	NA	NA	NA	rs2304593	0.06	0.06	0.066	0.048722	0.0815	0.0496	0.0519	0.0303	0.0368	0.09	0.06	0.05	0.04	0.0574	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.238593	NA	NA	0.067791	0.037449	NA	0.036	NA	3.793309
1273	1	108681600	108681600	T	C	intronic	SLC25A24	NA	NA	NA	intronic	ENSG00000085491	NA	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	rs34563977	0.15	0.15	0.129	0.138778	0.2068	0.0794	0.1715	0.1067	0.1503	0.2	0.08	0.19	0.12	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.034962	NA	NA	NA	NA	NA	0.152	NA	3.7932
1273	1	151681635	151681635	T	C	intronic	CELF3	NA	NA	NA	intronic	ENSG00000159409	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs2280475	0.25	0.25	0.215	0.235823	0.2068	0.2371	0.3285	0.2867	0.1299	0.2	0.22	0.32	0.3	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.338311	NA	NA	NA	NA	NA	0.261	NA	3.7932
1273	9	115969423	115969423	C	T	intronic	FKBP15	NA	NA	NA	intronic	ENSG00000119321	NA	NA	NA	NA	NA	9q32	NA	NA	NA	NA	rs4548256	0.19	0.19	0.163	0.190096	0.2068	0.0238	0.2161	0.3298	0.137	0.22	0.02	0.21	0.31	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.019386	NA	NA	NA	NA	NA	0.036	NA	3.7932
1273	16	84695126	84695126	G	A	intronic	KLHL36	NA	NA	NA	intronic	ENSG00000135686	NA	NA	NA	NA	NA	16q24.1	NA	NA	NA	NA	rs12924673	0.2	0.2	0.212	0.19389	0.2068	0.0357	0.111	0.4319	0.0808	0.23	0.04	0.13	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.637454	NA	NA	NA	NA	NA	0.275	NA	3.7932
1273	17	74397026	74397026	G	A	intronic	UBE2O	NA	NA	NA	intronic	ENSG00000175931	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs3809693	0.36	0.36	0.385	0.348243	0.2068	0.4881	0.2911	0.4433	0.2618	0.2	0.53	0.3	0.46	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.005678	NA	NA	NA	NA	NA	0.442	NA	3.7932
1273	19	17831591	17831591	G	A	intronic	MAP1S	NA	NA	NA	intronic	ENSG00000130479	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs56149143	0.11	0.11	0.098	0.110423	0.2068	0.0169	0.1772	0.0673	0.1186	0.2	0.01	0.18	0.05	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.418299	NA	NA	NA	NA	NA	0.196	NA	3.7932
1273	20	30232452	30232452	C	T	intronic	COX4I2	NA	NA	NA	intronic	ENSG00000131055	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs6120970	0.22	0.22	0.228	0.210663	0.2068	NA	0.1527	0.5257	0.047	0.22	NA	0.18	0.51	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.333204	NA	NA	NA	NA	NA	0.21	NA	3.7932
1273	20	30232504	30232504	G	A	intronic	COX4I2	NA	NA	NA	intronic	ENSG00000131055	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs7269866	0.22	0.22	0.219	0.210663	0.2068	NA	0.1527	0.5257	0.047	0.21	NA	0.16	0.51	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.102336	NA	NA	NA	NA	NA	0.21	NA	3.7932
1273	6	107420516	107420516	A	C	intronic	BEND3	NA	NA	NA	intronic	ENSG00000178409	NA	NA	NA	Score=550;Name=lod=230	NA	6q21	NA	NA	NA	NA	rs4946811	0.36	0.36	0.319	0.358826	0.4155	0.4702	0.5548	0.0628	0.4468	0.4	0.45	0.54	0.07	0.4127	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.873375	NA	NA	0.378925	0.109169	NA	0.254	NA	3.792875
1273	6	37447994	37447994	C	G	UTR3	FTSJD2	NM_015050:c.*73C>G	NA	NA	UTR3	ENSG00000137200	ENST00000373451:c.*73C>G	NA	NA	NA	NA	6p21.2	NA	NA	NA	NA	rs1874736	0.37	0.37	0.344	0.32528	0.5408	0.3264	0.5216	0.0333	0.3579	0.54	0.33	0.54	0.04	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.132815	NA	NA	NA	NA	NA	0.312	NA	3.7925334
1273	12	132539468	132539468	G	A	intronic	EP400	NA	NA	NA	intronic	ENSG00000183495	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs12321543	0.04	0.04	0.03	0.029353	0.0805	NA	0.0403	0.0038	0.0337	0.08	NA	0.04	0.01	0.0546	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.307922	NA	NA	0.072442	0.007717	NA	0.051	NA	3.792458
1273	21	22790936	22790936	G	A	intronic	NCAM2	NA	NA	NA	intronic	ENSG00000154654	NA	NA	NA	NA	NA	21q21.1	NA	NA	NA	NA	rs986372	0.13	0.13	0.125	0.117412	0.0666	0.1627	0.1023	0.1868	0.0399	0.07	0.15	0.09	0.22	0.0783	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.324296	NA	NA	0.06273	0.166116	NA	0.101	NA	3.79237
1273	1	109524584	109524584	C	A	intronic	WDR47	NA	NA	NA	intronic	ENSG00000085433	NA	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	rs487901	0.2	0.2	0.157	0.185304	0.2078	0.2163	0.2536	0.1218	0.1677	0.2	0.23	0.27	0.12	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.710423	NA	NA	NA	NA	NA	0.268	NA	3.7922
1273	10	92655559	92655559	T	A	intronic	RPP30	NA	NA	NA	intronic	ENSG00000148688	NA	NA	NA	NA	NA	10q23.31	NA	NA	NA	NA	rs10881848	0.26	0.26	0.259	0.285543	0.2078	0.1667	0.1945	0.5257	0.228	0.2	0.18	0.2	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.179488	NA	NA	NA	NA	NA	0.239	NA	3.7922
1273	10	128829803	128829803	T	C	intronic	DOCK1	NA	NA	NA	intronic	ENSG00000150760	NA	NA	NA	NA	NA	10q26.2	NA	NA	NA	NA	rs10765138	0.15	0.15	0.137	0.125998	0.2078	0.0933	0.2003	0.0461	0.1309	0.2	0.1	0.22	0.05	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.572131	NA	NA	NA	NA	NA	0.159	NA	3.7922
1273	15	84946326	84946326	G	A	intergenic	GOLGA6L4,DNM1P41	dist=32206;dist=99480	NA	NA	ncRNA_intronic	ENSG00000259683	NA	NA	NA	NA	NA	15q25.2	NA	NA	NA	NA	rs1808567	0.44	0.44	0.448	0.491014	0.2078	0.6776	0.1988	0.708	0.5041	0.2	0.64	0.24	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.417386	NA	NA	NA	NA	NA	0.58	NA	3.7922
1273	16	614445	614445	C	T	intronic	C16orf11	NA	NA	NA	intronic	ENSG00000161992	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs57546191	0.16	0.16	0.169	0.190296	0.2078	0.0268	0.1124	0.2231	0.3517	0.22	0.03	0.13	0.23	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.337847	NA	NA	NA	NA	NA	0.181	NA	3.7922
1273	20	30227639	30227639	A	G	intronic	COX4I2	NA	NA	NA	intronic	ENSG00000131055	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs6088858	0.22	0.22	0.186	0.217452	0.2078	NA	0.1527	0.5439	0.0562	0.21	NA	0.16	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.568291	NA	NA	NA	NA	NA	0.217	NA	3.7922
1273	12	50284583	50284583	A	T	intronic	FAIM2	NA	NA	NA	intronic	ENSG00000135472	NA	NA	NA	NA	NA	12q13.12	NA	NA	NA	NA	rs113855392	0.04	0.04	0.037	0.0327476	0.1083	NA	0.0403	0.0038	0.0225	0.11	NA	0.03	0.01	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.458296	NA	NA	0.099623	0.016618	NA	0.022	NA	3.792077
1273	6	25918688	25918688	G	A	intronic	SLC17A2	NA	NA	NA	intronic	ENSG00000112337	NA	NA	NA	NA	NA	6p22.2	NA	Name=GATA2_(CG2-96),eGFP-GATA2,eGFP-JunD	NA	NA	rs3752421	0.43	0.43	0.386	0.404952	0.4026	0.7093	0.4568	0.1513	0.3998	0.39	0.73	0.41	0.17	0.4155	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.003781	NA	NA	0.389884	0.192919	NA	0.254	NA	3.792016
1273	16	11773733	11773733	C	G	intronic	TXNDC11	NA	NA	NA	intronic	ENSG00000153066	NA	NA	NA	NA	NA	16p13.13	NA	NA	NA	NA	rs8191352	0.09	0.09	0.063	0.0754792	0.0736	0.1786	0.085	0.0091	0.0542	0.07	0.17	0.09	0.01	0.0733	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.14125	NA	NA	0.061144	0.017841	NA	0.058	NA	3.791956
1273	17	73539385	73539385	T	C	intronic	LLGL2	NA	NA	NA	UTR5	ENSG00000073350	ENST00000581713:c.-123T>C	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs62088546	0.33	0.33	0.316	0.344249	0.3748	0.4504	0.2637	0.1218	0.5613	0.39	0.46	0.29	0.14	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.489321	NA	NA	NA	NA	NA	0.319	NA	3.7918667
1273	19	50965131	50965131	C	T	intronic	MYBPC2	NA	NA	NA	intronic	ENSG00000086967	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs8113377	0.08	0.08	0.076	0.0854633	0.0706	0.0298	0.0605	0.1952	0.0276	0.06	0.02	0.07	0.18	0.0874	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.73137	NA	NA	0.050419	0.168405	NA	0.051	NA	3.791581
1273	16	23400194	23400194	G	A	UTR3	COG7	NM_153603:c.*47C>T	NA	NA	UTR3	ENSG00000168434	ENST00000307149:c.*47C>T,ENST00000561854:c.*452C>T	NA	NA	NA	NA	16p12.2	NA	NA	NA	NA	rs250587	0.25	0.25	0.236	0.24361	0.17	0.2738	0.1499	0.326	0.2434	0.17	0.3	0.17	0.36	0.203	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.094663	NA	NA	0.168837	0.276969	NA	0.196	NA	3.7914964
1273	4	26483208	26483208	C	T	UTR3	CCKAR	NM_000730:c.*52G>A	NA	NA	UTR3	ENSG00000163394	ENST00000295589:c.*52G>A	NA	NA	NA	NA	4p15.2	NA	NA	NA	NA	rs17846984	0.24	0.24	0.227	0.261981	0.2753	0.2212	0.2219	0.2163	0.3804	0.29	0.22	0.23	0.21	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.420662	NA	NA	0.2667	0.241438	NA	0.174	NA	3.7913334
1273	1	150416913	150416913	A	G	intronic	RPRD2	NA	NA	NA	intronic	ENSG00000163125	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs16836940	0.29	0.29	0.303	0.273762	0.2087	0.0585	0.245	0.6664	0.0521	0.23	0.09	0.25	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.001072	NA	NA	NA	NA	NA	0.348	NA	3.7913
1273	10	52603659	52603659	C	T	intronic	A1CF	NA	NA	NA	intronic	ENSG00000148584	NA	NA	NA	NA	NA	10q11.23	NA	NA	NA	NA	rs10821877	0.16	0.16	0.17	0.169928	0.2087	0.0119	0.1297	0.261	0.1984	0.21	0.01	0.16	0.26	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.332033	NA	NA	NA	NA	NA	0.159	NA	3.7913
1273	12	2720988	2720988	T	C	intronic	CACNA1C	NA	NA	NA	intronic	ENSG00000151067	NA	NA	NA	NA	NA	12p13.33	NA	NA	NA	NA	rs216007	0.26	0.26	0.253	0.261781	0.2087	0.3512	0.2262	0.2504	0.2648	0.21	0.38	0.2	0.26	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.291099	NA	NA	NA	NA	NA	0.312	NA	3.7913
1273	15	68937441	68937441	C	T	intronic	CORO2B	NA	NA	NA	intronic	ENSG00000103647	NA	NA	NA	NA	NA	15q23	NA	NA	NA	NA	rs2291534	0.18	0.18	0.172	0.167931	0.2087	0.0635	0.1441	0.2617	0.1237	0.2	0.07	0.17	0.28	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.168674	NA	NA	NA	NA	NA	0.123	NA	3.7913
1273	18	677931	677931	C	G	intronic	ENOSF1	NA	NA	NA	intronic	ENSG00000132199	NA	NA	NA	NA	NA	18p11.32	NA	NA	NA	NA	rs2298581	0.27	0.27	0.28	0.285743	0.2087	0.3889	0.2334	0.2443	0.3517	0.2	0.41	0.2	0.28	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.619077	NA	NA	NA	NA	NA	0.304	NA	3.7913
1273	22	37533530	37533530	G	C	intronic	IL2RB	NA	NA	NA	intronic	ENSG00000100385	NA	NA	NA	NA	NA	22q12.3	NA	NA	NA	NA	rs3218292	0.16	0.16	0.123	0.152356	0.2087	0.2331	0.2003	0.0113	0.1677	0.23	0.15	0.22	0.01	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.079157	NA	NA	NA	NA	NA	0.138	NA	3.7913
1273	12	11138683	11138683	C	T	exonic	TAS2R50	NA	synonymous SNV	TAS2R50:NM_176890:exon1:c.G777A:p.P259P	exonic	ENSG00000212126	NA	synonymous SNV	ENSG00000212126:ENST00000506868:exon1:c.G777A:p.P259P	NA	NA	12p13.2	NA	NA	NA	NA	rs10772397	0.57	0.57	0.538	0.547125	0.6571	0.755	0.6009	0.1755	0.684	0.66	0.74	0.64	0.2	0.6096	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.345792	NA	NA	0.608837	0.244212	NA	0.457	NA	3.7911296
1273	13	19751032	19751032	G	T	intronic	TUBA3C	NA	NA	NA	intronic	ENSG00000198033	NA	NA	NA	NA	NA	13q12.11	NA	NA	NA	NA	rs36216109	0.05	0.05	0.055	0.0473243	0.0855	0.002	0.0562	0.0552	0.0378	0.07	0.0017	0.06	0.08	0.057	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.170868	NA	NA	0.066628	0.052429	NA	0.087	NA	3.790872
1273	5	118970770	118970770	C	T	UTR3	FAM170A	NM_182761:c.*41C>T,NM_001163991:c.*41C>T	NA	NA	exonic	ENSG00000164334	NA	synonymous SNV	ENSG00000164334:ENST00000509264:exon4:c.C552T:p.F184F	NA	NA	5q23.1	NA	NA	NA	NA	rs2434600	0.28	0.28	0.253	0.278554	0.4254	0.0863	0.3588	0.1891	0.3896	0.41	0.1	0.38	0.22	0.3624	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.185421	NA	NA	0.421528	0.20916	NA	0.355	NA	3.790672
1273	8	49987965	49987965	A	C	UTR3	C8orf22	NM_001256596:c.*233A>C,NM_001256597:c.*233A>C,NM_001007176:c.*159A>C,NM_001256598:c.*875A>C	NA	NA	UTR3	ENSG00000168333	ENST00000517663:c.*233A>C,ENST00000522267:c.*233A>C,ENST00000399653:c.*159A>C,ENST00000303202:c.*875A>C	NA	NA	NA	NA	8q11.21	NA	NA	NA	NA	rs7005693	0.56	0.56	0.533	0.512979	0.5427	0.7847	0.6167	0.3018	0.4141	0.55	0.82	0.59	0.26	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.472745	NA	NA	NA	NA	NA	0.536	NA	3.7906334
1273	19	54801910	54801910	A	G	intronic	LILRA3	NA	NA	NA	intronic	ENSG00000170866	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs3815936	0.19	0.19	0.168	0.208466	0.0427	0.1349	0.1527	0.4387	0.183	0.04	0.2	0.15	0.44	0.1153	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.622352	NA	NA	0.051472	0.402417	NA	0.225	NA	3.790528
1273	6	31110671	31110671	G	C	intronic	CCHCR1	NA	NA	NA	intronic	ENSG00000204536	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs1265085	0.24	0.24	0.213	0.251997	0.2097	0.3462	0.3314	0.1793	0.2403	0.21	0.29	0.31	0.18	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.796358	NA	NA	NA	NA	NA	0.217	NA	3.7903
1273	6	102133993	102133993	G	A	intronic	GRIK2	NA	NA	NA	intronic	ENSG00000164418	NA	NA	NA	NA	NA	6q16.3	NA	NA	NA	NA	rs2852565	0.41	0.41	0.396	0.460463	0.2097	0.498	0.3934	0.7179	0.3793	0.2	0.48	0.37	0.69	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.612501	NA	NA	NA	NA	NA	0.377	NA	3.7903
1273	9	115968711	115968711	G	A	intronic	FKBP15	NA	NA	NA	intronic	ENSG00000119321	NA	NA	NA	NA	NA	9q32	NA	NA	NA	NA	rs1133619	0.2	0.2	0.214	0.20627	0.2097	0.0228	0.2233	0.3858	0.137	0.22	0.02	0.22	0.37	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.415233	NA	NA	NA	NA	NA	0.196	NA	3.7903
1273	11	113803887	113803887	A	G	intronic	HTR3B	NA	NA	NA	intronic	ENSG00000149305	NA	NA	NA	NA	NA	11q23.2	NA	NA	NA	NA	rs2276307	0.19	0.19	0.171	0.211661	0.2097	0.1796	0.2608	0.1157	0.3415	0.21	0.21	0.23	0.1	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.423909	NA	NA	NA	NA	NA	0.239	NA	3.7903
1273	19	10096650	10096650	T	C	intronic	COL5A3	NA	NA	NA	intronic	ENSG00000080573	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs1862474	0.27	0.27	0.234	0.245008	0.2097	0.3611	0.2565	0.2277	0.1769	0.2	0.36	0.27	0.25	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.095149	NA	NA	NA	NA	NA	0.225	NA	3.7903
1273	19	40225790	40225790	C	T	intronic	CLC	NA	NA	NA	intronic	ENSG00000105205	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs76370710	0.16	0.16	0.151	0.185703	0.2097	0.1667	0.2262	0.0575	0.3252	0.21	0.17	0.17	0.07	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.760416	NA	NA	NA	NA	NA	0.116	NA	3.7903
1273	22	41981957	41981957	A	G	intronic	PMM1	NA	NA	NA	intronic	ENSG00000100417	NA	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs5996039	0.29	0.29	0.277	0.339457	0.2097	0.0903	0.5144	0.5106	0.3742	0.2	0.09	0.49	0.51	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.277099	NA	NA	NA	NA	NA	0.355	NA	3.7903
1273	11	113111501	113111501	T	C	intronic	NCAM1	NA	NA	NA	intronic	ENSG00000149294	NA	NA	NA	Score=527;Name=lod=184	NA	11q23.2	NA	NA	NA	NA	rs2303377	0.43	0.43	0.407	0.413938	0.3936	0.5645	0.4438	0.1929	0.5573	0.42	0.59	0.43	0.24	0.4271	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.967214	1.967214	NA	0.389091	0.225195	NA	0.384	NA	3.790209
1273	17	61565990	61565990	G	C	intronic	ACE	NA	NA	NA	UTR3	ENSG00000159640	ENST00000579314:c.*16G>C,ENST00000579204:c.*435G>C	NA	NA	NA	NA	17q23.3	NA	Name=SRF	NA	NA	rs4341	0.52	0.52	0.435	0.529952	0.4254	0.6746	0.5692	0.413	0.6186	0.43	0.69	0.56	0.43	0.4997	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.026694	NA	NA	0.451395	0.416251	NA	0.471	NA	3.7901717
1273	19	19258656	19258656	G	A	intronic	MEF2B,MEF2BNB-MEF2B	NA	NA	NA	intronic	ENSG00000064489,ENSG00000213999	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs3729767	0.07	0.07	0.05	0.0714856	0.0706	0.0883	0.0533	0.0136	0.1462	0.08	0.09	0.07	0.02	0.0739	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.136653	NA	NA	0.065349	0.012937	NA	0.08	NA	3.790151
1273	6	43648803	43648803	A	G	intronic	MRPS18A	NA	NA	NA	intronic	ENSG00000096080	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs2236345	0.13	0.13	0.119	0.15016	0.0596	0.1062	0.0504	0.3116	0.1411	0.06	0.14	0.05	0.29	0.0904	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.320452	2.320452	NA	0.059884	0.261689	NA	0.065	NA	3.790116
1273	5	115428334	115428334	G	T	exonic	COMMD10	NA	synonymous SNV	COMMD10:NM_016144:exon4:c.G336T:p.T112T	exonic	ENSG00000145781	NA	synonymous SNV	ENSG00000145781:ENST00000506589:exon2:c.G204T:p.T68T,ENSG00000145781:ENST00000274458:exon4:c.G336T:p.T112T,ENSG00000145781:ENST00000507356:exon4:c.G336T:p.T112T,ENSG00000145781:ENST00000515539:exon4:c.G294T:p.T98T	NA	NA	5q23.1	NA	NA	NA	NA	rs1129494	0.48	0.48	0.442	0.441893	0.66	0.3849	0.5346	0.1725	0.5746	0.67	0.39	0.62	0.2	0.5733	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.729827	NA	NA	0.643605	0.255677	ID=COSM149901;OCCURENCE=1(stomach)	0.42	NA	3.7897616
1273	17	20160925	20160925	C	T	intronic	SPECC1	NA	NA	NA	ncRNA_intronic	ENSG00000263494	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs3751979	0.23	0.23	0.246	0.251398	0.174	0.1012	0.1945	0.5219	0.1605	0.18	0.09	0.15	0.52	0.1892	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.573423	1.573423	NA	0.180465	0.471857	NA	0.312	NA	3.7896683
1273	3	158422506	158422506	G	A	UTR3	RARRES1	NM_002888:c.*59C>T	NA	NA	UTR3	ENSG00000118849	ENST00000479756:c.*59C>T	NA	NA	NA	NA	3q25.32	NA	NA	NA	NA	rs4680457	0.55	0.55	0.585	0.583267	0.5437	0.3839	0.5303	0.7716	0.6125	0.56	0.38	0.53	0.77	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.410431	NA	NA	NA	NA	NA	0.565	NA	3.7896334
1273	1	150990913	150990913	G	C	intronic	PRUNE	NA	NA	NA	intronic	ENSG00000143363	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs7526955	0.07	0.07	0.069	0.0601038	0.0676	NA	0.0418	0.1483	0.0082	0.08	NA	0.04	0.15	0.0606	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.043072	NA	NA	0.082209	0.150931	NA	0.072	NA	3.789591
1273	1	206328647	206328647	G	C	intronic	CTSE	NA	NA	NA	intronic	ENSG00000196188	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs28694519	0.24	0.24	0.246	0.250799	0.2107	0.0169	0.1873	0.6316	0.0634	0.21	0.01	0.21	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.177231	NA	NA	NA	NA	NA	0.341	NA	3.7893
1273	2	232298812	232298812	C	T	intergenic	B3GNT7,NCL	dist=32937;dist=20647	NA	NA	ncRNA_exonic	ENSG00000172799	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs13017932	0.34	0.34	0.362	0.327476	0.2107	0.4435	0.1945	0.4516	0.2546	0.21	0.48	0.2	0.49	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.405515	NA	NA	NA	NA	NA	0.326	NA	3.7893
1273	4	25790077	25790077	G	A	intronic	SEL1L3	NA	NA	NA	intronic	ENSG00000091490	NA	NA	NA	NA	NA	4p15.2	NA	NA	NA	NA	rs9985515	0.15	0.15	0.146	0.166534	0.2107	0.001	0.1326	0.2284	0.2321	0.21	0.0017	0.15	0.23	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.316232	NA	NA	NA	NA	NA	0.101	NA	3.7893
1273	7	6966365	6966365	T	C	intergenic	CCZ1B,LOC100131257	dist=100439;dist=149036	NA	NA	ncRNA_intronic	ENSG00000226943	NA	NA	NA	NA	NA	7p22.1	NA	NA	NA	NA	rs61399826	0.13	0.13	0.106	0.126198	0.2107	0.0556	0.0865	0.0991	0.1769	0.21	0.05	0.12	0.1	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.292769	NA	NA	NA	NA	NA	0.087	NA	3.7893
1273	9	2645201	2645201	C	G	intronic	VLDLR	NA	NA	NA	intronic	ENSG00000147852	NA	NA	NA	NA	NA	9p24.2	NA	NA	NA	NA	rs2290465	0.3	0.3	0.243	0.258786	0.2107	0.5992	0.3703	0.0598	0.1472	0.22	0.58	0.37	0.04	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.344135	NA	NA	NA	NA	NA	0.246	NA	3.7893
1273	11	1475628	1475628	C	T	intronic	BRSK2	NA	NA	NA	intronic	ENSG00000174672	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs66529968	0.16	0.16	0.163	0.146565	0.2107	0.0645	0.147	0.1672	0.137	0.22	0.08	0.17	0.17	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.429208	NA	NA	NA	NA	NA	0.159	NA	3.7893
1273	11	61490245	61490245	G	A	intronic	DAGLA	NA	NA	NA	intronic	ENSG00000134780	NA	NA	NA	NA	NA	11q12.2	NA	NA	NA	NA	rs17156254	0.19	0.19	0.13	0.221246	0.2107	0.1855	0.3228	0.1029	0.3569	0.22	0.16	0.32	0.09	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.847351	NA	NA	NA	NA	NA	0.239	NA	3.7893
1273	13	33679940	33679940	T	C	intronic	STARD13	NA	NA	NA	intronic	ENSG00000133121	NA	NA	NA	NA	NA	13q13.1	NA	NA	NA	NA	rs9568847	0.24	0.24	0.248	0.239018	0.2107	0.3105	0.134	0.289	0.2014	0.19	0.31	0.15	0.28	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2389	NA	NA	NA	NA	NA	0.203	NA	3.7893
1273	14	100793431	100793431	G	A	intronic	SLC25A47	NA	NA	NA	intronic	ENSG00000140107	NA	NA	NA	NA	NA	14q32.2	NA	NA	NA	NA	rs1535464	0.14	0.14	0.143	0.135583	0.2107	0.123	0.1196	0.0749	0.1646	0.21	0.13	0.13	0.07	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.326786	NA	NA	NA	NA	NA	0.181	NA	3.7893
1273	15	75310394	75310394	T	C	intronic	SCAMP5	NA	NA	NA	intronic	ENSG00000198794	NA	NA	NA	NA	NA	15q24.2	NA	NA	NA	NA	rs2289582	0.32	0.32	0.324	0.393371	0.2107	0.4077	0.2478	0.4539	0.5879	0.22	0.41	0.25	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.197997	NA	NA	NA	NA	NA	0.304	NA	3.7893
1273	15	84566544	84566544	C	T	intronic	ADAMTSL3	NA	NA	NA	intronic	ENSG00000156218	NA	NA	NA	NA	NA	15q25.2	NA	NA	NA	NA	rs11259927	0.3	0.3	0.258	0.338259	0.2107	0.3284	0.4827	0.3116	0.4131	0.2	0.32	0.43	0.33	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.062382	NA	NA	NA	NA	NA	0.268	NA	3.7893
1273	16	20488107	20488107	C	A	intronic	ACSM2A	NA	NA	NA	intronic	ENSG00000183747	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs12598584	0.37	0.37	0.4	0.36262	0.2107	0.5883	0.1556	0.4985	0.2495	0.22	0.58	0.17	0.5	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.385995	NA	NA	NA	NA	NA	0.42	NA	3.7893
1273	19	48254707	48254707	T	C	intronic	GLTSCR2	NA	NA	NA	intronic	ENSG00000105373	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs113310396	0.09	0.09	NA	0.0740815	0.2107	0.006	0.0807	0.0045	0.093	0.21	0.01	0.09	0.01	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.411285	NA	NA	NA	NA	NA	0.051	NA	3.7893
1273	19	55485786	55485786	G	A	intronic	NLRP2	NA	NA	NA	intronic	ENSG00000022556	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs703468	0.26	0.26	0.253	0.240415	0.2107	0.3542	0.196	0.233	0.1953	0.2	0.41	0.18	0.24	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.468059	NA	NA	NA	NA	NA	0.268	NA	3.7893
1273	9	139972900	139972900	T	C	intronic	UAP1L1	NA	NA	NA	exonic	ENSG00000197355	NA	synonymous SNV	ENSG00000197355:ENST00000360271:exon1:c.T72C:p.R24R	NA	NA	9q34.3	NA	NA	NA	NA	rs10870176	0.19	0.19	0.194	0.186502	0.3648	0.0268	0.2406	0.0469	0.318	0.37	0.03	0.27	0.07	0.3037	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.854617	NA	NA	0.37564	0.105227	NA	0.188	NA	3.7891933
1273	10	43691691	43691691	C	T	UTR3	RASGEF1A	NM_145313:c.*1G>A	NA	NA	UTR3	ENSG00000198915	ENST00000374459:c.*1G>A,ENST00000395810:c.*1G>A,ENST00000395809:c.*1G>A	NA	NA	NA	NA	10q11.21	NA	NA	NA	NA	rs1254968	0.23	0.23	0.211	0.235224	0.17	0.5169	0.2118	0.0219	0.317	0.18	0.5	0.17	0.02	0.2018	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.052916	2.052916	NA	0.172791	0.058103	NA	0.138	NA	3.7887424
1273	4	86952648	86952648	T	C	intronic	MAPK10	NA	NA	NA	intronic	ENSG00000109339	NA	NA	NA	NA	NA	4q21.3	NA	NA	NA	NA	rs10025882	0.1	0.1	0.106	0.0966454	0.0895	0.005	0.0562	0.2352	0.0399	0.09	0.01	0.06	0.23	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.459918	NA	NA	0.121851	0.252168	NA	0.109	NA	3.788649
1273	12	1902766	1902766	T	G	UTR3	CACNA2D4	NM_172364:c.*55A>C	NA	NA	UTR3	ENSG00000151062	ENST00000382722:c.*55A>C,ENST00000537784:c.*662A>C,ENST00000444595:c.*1653A>C,ENST00000545595:c.*662A>C,ENST00000538450:c.*55A>C,ENST00000587995:c.*55A>C,ENST00000585385:c.*662A>C,ENST00000588077:c.*55A>C	NA	NA	NA	NA	12p13.33	NA	NA	NA	NA	rs2058111	0.42	0.42	0.383	0.383986	0.5447	0.4653	0.3703	0.1596	0.4479	0.55	0.49	0.41	0.13	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.22182	NA	NA	NA	NA	NA	0.529	NA	3.7886334
1273	8	9564437	9564437	A	G	exonic	TNKS	NA	synonymous SNV	TNKS:NM_003747:exon8:c.A1386G:p.T462T	exonic	ENSG00000173273	NA	synonymous SNV	ENSG00000173273:ENST00000310430:exon8:c.A1386G:p.T462T,ENSG00000173273:ENST00000518281:exon8:c.A675G:p.T225T,ENSG00000173273:ENST00000520408:exon8:c.A1386G:p.T462T	NA	NA	8p23.1	NA	NA	NA	NA	rs7006985	0.55	0.55	0.547	0.546725	0.663	0.3829	0.5331	0.5605	0.5869	0.65	0.37	0.6	0.54	0.581	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.072146	NA	NA	0.634302	0.544485	ID=COSM150448;OCCURENCE=1(stomach)	0.623	NA	3.7883646
1273	1	22214645	22214645	C	A	intronic	HSPG2	NA	NA	NA	intronic	ENSG00000142798	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs3767140	0.36	0.36	0.299	0.342053	0.2117	0.6062	0.4251	0.2867	0.2198	0.22	0.6	0.4	0.26	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.157317	NA	NA	NA	NA	NA	0.333	NA	3.7883
1273	2	71801267	71801267	G	C	intronic	DYSF	NA	NA	NA	intronic	ENSG00000135636	NA	NA	NA	NA	NA	2p13.2	NA	NA	NA	NA	rs57041989	0.26	0.26	0.257	0.228834	0.2117	0.3423	0.1873	0.2375	0.1472	0.22	0.37	0.22	0.24	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.526484	NA	NA	NA	NA	NA	0.181	NA	3.7883
1273	3	160783445	160783445	T	C	intronic	PPM1L	NA	NA	NA	intronic	ENSG00000163590	NA	NA	NA	NA	NA	3q26.1	NA	NA	NA	NA	rs6763838	0.26	0.26	0.252	0.288738	0.2117	0.3026	0.33	0.3336	0.2638	0.22	0.27	0.31	0.29	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.365925	NA	NA	NA	NA	NA	0.341	NA	3.7883
1273	7	139726207	139726207	G	A	intronic	PARP12	NA	NA	NA	intronic	ENSG00000059378	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs2286198	0.37	0.37	0.372	0.347843	0.2117	0.5	0.3862	0.447	0.1697	0.21	0.49	0.35	0.49	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.760617	NA	NA	NA	NA	NA	0.297	NA	3.7883
1273	11	6636300	6636300	A	G	intronic	TPP1	NA	NA	NA	intronic	ENSG00000166340	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs1800723	0.14	0.14	0.124	0.115216	0.2117	0.0863	0.1931	0.0113	0.1309	0.22	0.1	0.19	0.02	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.796411	NA	NA	NA	NA	NA	0.152	NA	3.7883
1273	19	34685617	34685617	C	G	intronic	LSM14A	NA	NA	NA	intronic	ENSG00000257103	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs872236	0.12	0.12	0.125	0.0960463	0.2117	0.123	0.0965	0.0106	0.0644	0.2	0.13	0.1	0.01	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.400557	NA	NA	NA	NA	NA	0.13	NA	3.7883
1273	7	132070086	132070086	C	A	intronic	PLXNA4	NA	NA	NA	intronic	ENSG00000221866	NA	NA	NA	NA	NA	7q32.3	NA	NA	NA	NA	rs17221229	0.04	0.04	0.033	0.0255591	0.0765	NA	0.0331	0.0053	0.0215	0.08	NA	0.04	0.0041	0.0565	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.560571	NA	NA	0.078782	0.017241	NA	0.029	NA	3.788218
1273	19	52002729	52002729	G	A	exonic	SIGLEC12	NA	synonymous SNV	SIGLEC12:NM_033329:exon2:c.C696T:p.G232G,SIGLEC12:NM_053003:exon3:c.C1050T:p.G350G	exonic	ENSG00000254521	NA	synonymous SNV	ENSG00000254521:ENST00000598614:exon2:c.C696T:p.G232G,ENSG00000254521:ENST00000291707:exon3:c.C1050T:p.G350G	NA	NA	19q13.41	NA	NA	NA	NA	rs2009362	0.55	0.55	0.539	0.565096	0.6272	0.37	0.7219	0.5522	0.6084	0.63	0.37	0.7	0.54	0.6142	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.176401	NA	NA	0.637093	0.569224	NA	0.522	NA	3.7881736
1273	6	135522939	135522939	T	C	intronic	MYB	NA	NA	NA	intronic	ENSG00000118513	NA	NA	NA	NA	NA	6q23.3	NA	NA	Name=2	NA	rs743589	0.45	0.45	0.449	0.476438	0.4115	0.4325	0.4539	0.612	0.4213	0.41	0.41	0.44	0.57	0.4212	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.860165	NA	NA	0.379385	0.59269	NA	0.464	NA	3.787915
1273	4	88584507	88584507	G	A	UTR3	DMP1	NM_001079911:c.*35G>A,NM_004407:c.*35G>A	NA	NA	ncRNA_UTR3	ENSG00000152592	NA	NA	NA	NA	NA	4q22.1	NA	NA	NA	NA	rs2627724	0.28	0.28	0.292	0.321286	0.2366	0.2589	0.2061	0.4652	0.3599	0.24	0.26	0.2	0.44	0.2596	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.022441	NA	NA	0.21593	0.383795	NA	0.268	NA	3.78787
1273	19	52506985	52506985	T	C	UTR5	ZNF615	NM_001199324:c.-21A>G,NM_198480:c.-21A>G	NA	NA	UTR5	ENSG00000197619	ENST00000602063:c.-21A>G,ENST00000594083:c.-21A>G,ENST00000599177:c.-21A>G,ENST00000376716:c.-21A>G,ENST00000598071:c.-21A>G,ENST00000601178:c.-21A>G,ENST00000597747:c.-21A>G,ENST00000599631:c.-21A>G	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs1433089	0.2	0.2	0.188	0.210463	0.1769	0.3998	0.2032	0.031	0.2975	0.19	0.39	0.15	0.04	0.2026	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.291919	NA	NA	0.166047	0.06128	ID=COSN165897;OCCURENCE=1(breast)	0.159	NA	3.7877864
1273	18	54448778	54448778	G	A	exonic	WDR7	NA	synonymous SNV	WDR7:NM_052834:exon18:c.G2982A:p.A994A,WDR7:NM_015285:exon19:c.G3081A:p.A1027A	exonic	ENSG00000091157	NA	synonymous SNV	ENSG00000091157:ENST00000357574:exon18:c.G2982A:p.A994A,ENSG00000091157:ENST00000254442:exon19:c.G3081A:p.A1027A	NA	NA	18q21.31	NA	NA	NA	NA	rs2302845	0.6	0.6	0.574	0.584864	0.6064	0.6905	0.7233	0.3343	0.6943	0.65	0.7	0.69	0.34	0.6357	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.330807	NA	NA	0.636977	0.380617	NA	0.58	NA	3.7875896
1273	11	33667333	33667333	A	G	exonic	KIAA1549L	NA	synonymous SNV	KIAA1549L:NM_012194:exon16:c.A4620G:p.T1540T	exonic	ENSG00000110427	NA	synonymous SNV	ENSG00000110427:ENST00000321505:exon16:c.A4620G:p.T1540T,ENSG00000110427:ENST00000389726:exon16:c.A4638G:p.T1546T	NA	NA	11p13	NA	NA	NA	NA	rs1033543	0.73	0.73	0.731	0.707668	0.6004	0.7232	0.6066	0.938	0.5624	0.63	0.73	0.62	0.94	0.6534	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.870488	NA	NA	0.625324	0.881494	NA	0.623	NA	3.7875426
1273	1	45471362	45471362	G	A	intronic	HECTD3	NA	NA	NA	intronic	ENSG00000126107	NA	NA	NA	NA	NA	1p34.1	NA	NA	NA	NA	rs12739545	0.24	0.24	0.209	0.246605	0.2127	0.2897	0.4092	0.1558	0.2444	0.22	0.27	0.34	0.16	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.22593	NA	NA	NA	NA	NA	0.341	NA	3.7873
1273	3	9985457	9985457	T	C	intronic	CRELD1	NA	NA	NA	intronic	ENSG00000163703	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs9878047	0.37	0.37	0.375	0.38099	0.2127	0.1567	0.3271	0.8132	0.2393	0.22	0.21	0.34	0.8	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.428551	NA	NA	NA	NA	NA	0.565	NA	3.7873
1273	3	10885787	10885787	G	A	intronic	SLC6A11	NA	NA	NA	intronic	ENSG00000132164	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs2304724	0.18	0.18	0.16	0.193091	0.2127	0.2688	0.121	0.0348	0.3599	0.23	0.26	0.14	0.05	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.499108	NA	NA	NA	NA	NA	0.145	NA	3.7873
1273	3	11925365	11925365	T	A	intergenic	TAMM41,SYN2	dist=37013;dist=120497	NA	NA	ncRNA_intronic	ENSG00000230342	NA	NA	NA	NA	NA	3p25.2	NA	NA	NA	NA	rs3927162	0.3	0.3	0.235	0.309704	0.2127	0.4107	0.2565	0.3487	0.2904	0.22	0.4	0.28	0.32	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.41018	NA	NA	NA	NA	NA	0.29	NA	3.7873
1273	3	11925383	11925383	A	G	intergenic	TAMM41,SYN2	dist=37031;dist=120479	NA	NA	ncRNA_intronic	ENSG00000230342	NA	NA	NA	NA	NA	3p25.2	NA	NA	NA	NA	rs3864016	0.3	0.3	0.241	0.309505	0.2127	0.4107	0.2565	0.348	0.2904	0.22	0.4	0.28	0.32	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.962842	NA	NA	NA	NA	NA	0.29	NA	3.7873
1273	5	168149759	168149759	A	G	intronic	SLIT3	NA	NA	NA	intronic	ENSG00000184347	NA	NA	NA	NA	NA	5q34	NA	NA	NA	NA	rs11746295	0.12	0.12	0.102	0.0838658	0.2127	0.0843	0.1052	0.0083	0.0378	0.22	0.1	0.12	0.02	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.128432	NA	NA	NA	NA	NA	0.123	NA	3.7873
1273	19	9771250	9771250	T	C	intronic	ZNF562	NA	NA	NA	intronic	ENSG00000171466	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs10418780	0.32	0.32	0.28	0.364417	0.2127	0.0853	0.4107	0.7844	0.2076	0.21	0.06	0.36	0.77	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.981926	NA	NA	NA	NA	NA	0.442	NA	3.7873
1273	20	37621180	37621180	A	G	intronic	DHX35	NA	NA	NA	intronic	ENSG00000101452	NA	NA	NA	NA	NA	20q12	NA	NA	NA	NA	rs68173814	0.17	0.17	0.162	0.164936	0.2127	0.131	0.1527	0.1225	0.2168	0.22	0.12	0.16	0.16	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.715701	NA	NA	NA	NA	NA	0.159	NA	3.7873
1273	3	32490894	32490894	G	A	intronic	CMTM7	NA	NA	NA	intronic	ENSG00000153551	NA	NA	NA	NA	NA	3p22.3	NA	NA	NA	NA	rs2304594	0.1	0.1	0.116	0.0790735	0.1113	0.1022	0.0807	0.0303	0.0869	0.13	0.15	0.08	0.04	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.491745	NA	NA	0.101457	0.043379	NA	0.058	NA	3.787243
1273	4	88416223	88416223	A	G	exonic	SPARCL1	NA	synonymous SNV	SPARCL1:NM_004684:exon3:c.T111C:p.P37P,SPARCL1:NM_001128310:exon4:c.T111C:p.P37P	exonic	ENSG00000152583	NA	synonymous SNV	ENSG00000152583:ENST00000282470:exon3:c.T111C:p.P37P,ENSG00000152583:ENST00000418378:exon4:c.T111C:p.P37P,ENSG00000152583:ENST00000434434:exon4:c.T111C:p.P37P,ENSG00000152583:ENST00000458304:exon4:c.T111C:p.P37P,ENSG00000152583:ENST00000509407:exon4:c.T111C:p.P37P,ENSG00000152583:ENST00000535835:exon4:c.T111C:p.P37P,ENSG00000152583:ENST00000543631:exon4:c.T111C:p.P37P,ENSG00000152583:ENST00000512317:exon5:c.T111C:p.P37P	NA	NA	4q22.1	NA	NA	NA	NA	rs8342	0.7	0.7	0.685	0.751398	0.5984	0.631	0.7939	0.9153	0.7812	0.6	0.62	0.76	0.91	0.6725	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.049923	NA	NA	0.608605	0.863595	NA	0.725	NA	3.7871616
1273	3	183677501	183677501	A	C	intronic	ABCC5	NA	NA	NA	intronic	ENSG00000114770	NA	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs4148584	0.07	0.07	0.075	0.0640974	0.0805	0.0863	0.0432	0.0545	0.0521	0.09	0.09	0.04	0.05	0.0643	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.848794	NA	NA	0.068087	0.044784	NA	0.043	NA	3.787113
1273	12	6950403	6950403	G	A	intronic	GNB3	NA	NA	NA	intronic	ENSG00000111664	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs28395781	0.04	0.04	0.041	0.0255591	0.0845	NA	0.0389	0.0023	0.0133	0.08	NA	0.06	0.0041	0.0564	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.491189	NA	NA	0.07201	0.013194	NA	0.022	NA	3.78709
1273	14	20822219	20822219	G	T	intronic	PARP2	NA	NA	NA	intronic	ENSG00000129484	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs1713412	0.23	0.23	0.26	0.273962	0.0437	0.1944	0.1542	0.6619	0.1534	0.04	0.17	0.13	0.67	0.1259	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.021639	NA	NA	0.043361	0.568994	NA	0.254	NA	3.787039
1273	20	6069598	6069598	T	C	intronic	FERMT1	NA	NA	NA	intronic	ENSG00000101311	NA	NA	NA	NA	NA	20p12.3	NA	NA	NA	NA	rs111975159	0.04	0.04	0.04	0.0321486	0.0835	NA	0.0749	0.0038	0.0204	0.08	NA	0.08	0.01	0.053	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.512185	NA	NA	0.076628	0.014753	NA	0.036	NA	3.786872
1273	10	72520660	72520660	T	C	UTR3	ADAMTS14	NM_080722:c.*51T>C,NM_139155:c.*51T>C	NA	NA	UTR3	ENSG00000138316	ENST00000373207:c.*51T>C,ENST00000373208:c.*51T>C	NA	NA	NA	NA	10q22.1	NA	NA	NA	NA	rs10999519	0.23	0.23	0.222	0.21865	0.1879	0.371	0.2305	0.1664	0.1554	0.19	0.37	0.2	0.17	0.1977	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.617976	NA	NA	0.161084	0.185967	NA	0.261	NA	3.7866494
1273	14	52622709	52622709	C	T	intergenic	NID2,PTGDR	dist=86763;dist=111722	NA	NA	ncRNA_exonic	ENSG00000258440	NA	NA	NA	NA	NA	14q22.1	NA	NA	NA	NA	rs62003468	0.13	0.13	0.126	0.137181	0.2137	0.0982	0.1095	0.0219	0.274	0.24	0.1	0.12	0.02	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.270102	NA	NA	NA	NA	NA	0.109	NA	3.7863
1273	19	40184519	40184519	A	G	intergenic	LGALS17A,LGALS14	dist=7506;dist=10427	NA	NA	ncRNA_intronic	ENSG00000269460	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs72480731	0.17	0.17	0.147	0.195088	0.2137	0.2054	0.2233	0.0424	0.3517	0.22	0.2	0.16	0.07	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.754567	NA	NA	NA	NA	NA	0.109	NA	3.7863
1273	1	45474750	45474750	A	T	intronic	HECTD3	NA	NA	NA	intronic	ENSG00000126107	NA	NA	NA	NA	NA	1p34.1	NA	NA	NA	NA	rs2275599	0.3	0.3	0.276	0.322085	0.2137	0.2897	0.4294	0.4304	0.2444	0.22	0.27	0.36	0.4	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.37211	NA	NA	NA	NA	ID=COSN163071;OCCURENCE=1(breast)	0.428	NA	3.7863
1273	1	45474755	45474755	C	G	intronic	HECTD3	NA	NA	NA	intronic	ENSG00000126107	NA	NA	NA	NA	NA	1p34.1	NA	NA	NA	NA	rs2275598	0.3	0.3	0.277	0.322085	0.2137	0.2897	0.4294	0.4304	0.2444	0.22	0.27	0.36	0.4	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.27842	NA	NA	NA	NA	NA	0.428	NA	3.7863
1273	1	45476489	45476489	A	G	intronic	HECTD3	NA	NA	NA	intronic	ENSG00000126107	NA	NA	NA	NA	NA	1p34.1	NA	NA	NA	NA	rs3806405	0.3	0.3	0.275	0.322085	0.2137	0.2897	0.4294	0.4304	0.2444	0.22	0.27	0.36	0.4	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.779157	NA	NA	NA	NA	NA	0.413	NA	3.7863
1273	3	51975577	51975577	C	T	intronic	RRP9	NA	NA	NA	intronic	ENSG00000114767	NA	NA	NA	NA	NA	3p21.2	NA	NA	NA	NA	rs929533	0.33	0.33	0.398	0.34385	0.2137	0.4157	0.4294	0.4924	0.1421	0.2	0.43	0.38	0.39	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.542888	NA	NA	NA	NA	NA	0.406	NA	3.7863
1273	5	96442957	96442957	T	A	intronic	LIX1	NA	NA	NA	intronic	ENSG00000145721,ENSG00000251606	NA	NA	NA	NA	NA	5q15	NA	NA	NA	NA	rs316179	0.31	0.31	0.324	0.360623	0.2137	0.2758	0.2767	0.6225	0.3047	0.21	0.25	0.27	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.002151	NA	NA	NA	NA	NA	0.442	NA	3.7863
1273	5	150429563	150429563	A	C	intronic	TNIP1	NA	NA	NA	intronic	ENSG00000145901	NA	NA	NA	NA	NA	5q33.1	NA	NA	NA	NA	rs2233294	0.13	0.13	0.117	0.102835	0.2137	0.0645	0.1311	0.0386	0.0951	0.22	0.07	0.14	0.05	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.24365	NA	NA	NA	NA	NA	0.058	NA	3.7863
1273	6	38851305	38851305	C	T	intronic	DNAH8	NA	NA	NA	intronic	ENSG00000124721	NA	NA	NA	NA	NA	6p21.2	NA	NA	NA	NA	rs62398567	0.11	0.11	0.116	0.096845	0.2137	0.003	0.121	0.059	0.1074	0.21	0.0035	0.13	0.07	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.155384	NA	NA	NA	NA	NA	0.145	NA	3.7863
1273	6	158571706	158571706	G	C	intronic	SERAC1	NA	NA	NA	intronic	ENSG00000122335	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs6933878	0.26	0.26	0.262	0.260383	0.2137	0.3026	0.1816	0.3056	0.2597	0.21	0.3	0.17	0.34	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.530856	NA	NA	NA	NA	NA	0.268	NA	3.7863
1273	7	55659085	55659085	T	C	intergenic	VOPP1,FKBP9L	dist=18885;dist=89682	NA	NA	upstream	ENSG00000233977	NA	NA	NA	NA	NA	7p11.2	NA	Name=FOSL2	NA	NA	rs6961400	0.73	0.73	0.732	0.737819	0.7137	0.877	0.6138	0.5862	0.9121	0.72	0.87	0.7	0.61	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.500199	NA	NA	NA	NA	NA	0.652	NA	3.7863
1273	10	90497655	90497655	T	C	intronic	LIPK	NA	NA	NA	intronic	ENSG00000204021	NA	NA	NA	NA	NA	10q23.31	NA	NA	NA	NA	rs405147	0.24	0.24	0.242	0.25599	0.2137	0.3502	0.2882	0.1959	0.2607	0.21	0.35	0.23	0.17	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.051502	NA	NA	NA	NA	NA	0.152	NA	3.7863
1273	16	23768710	23768710	C	T	intronic	CHP2	NA	NA	NA	intronic	ENSG00000166869	NA	NA	NA	NA	NA	16p12.2	NA	NA	NA	NA	rs109592	0.19	0.19	0.205	0.217652	0.2137	0.2351	0.1772	0.1467	0.3282	0.2	0.24	0.18	0.14	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.143724	NA	NA	NA	NA	NA	0.13	NA	3.7863
1273	8	139707019	139707019	G	A	intronic	COL22A1	NA	NA	NA	intronic	ENSG00000169436	NA	NA	NA	NA	NA	8q24.23	NA	NA	NA	NA	rs62527938	0.11	0.11	0.113	0.122005	0.0676	0.0258	0.0749	0.2935	0.0787	0.06	0.02	0.1	0.29	0.0775	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.877206	NA	NA	0.068721	0.240127	NA	0.217	NA	3.786179
1273	10	96039708	96039708	C	T	ncRNA_exonic	PLCE1-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000268894	NA	NA	NA	NA	NA	10q23.33	NA	NA	NA	NA	rs2274225	0.27	0.27	0.262	0.278355	0.3002	0.3036	0.2334	0.2315	0.3252	0.29	0.3	0.25	0.22	0.2898	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.895984	NA	NA	0.290621	0.233244	NA	0.217	NA	3.7860456
1273	9	33618460	33618460	A	T	intergenic	ANKRD18B,ANXA2P2	dist=45459;dist=5763	NA	NA	exonic	ENSG00000205274	NA	nonsynonymous SNV	ENSG00000205274:ENST00000379435:exon2:c.A346T:p.S116C	NA	NA	9p13.3	NA	NA	NA	NA	rs966447	0.44	0.44	0.411	0.428914	0.5437	0.5278	0.5072	0.1195	0.5716	0.55	0.53	0.52	0.12	0.5036	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.576657	2.576657	0.05	NA	NA	NA	0.333	NA	3.7860334
1273	1	150300727	150300727	T	C	intronic	PRPF3	NA	NA	NA	intronic	ENSG00000117360	NA	NA	NA	NA	NA	1q21.3	NA	Name=EBF,EBF1_(C-8)	NA	NA	rs834225	0.54	0.54	0.549	0.502796	0.5944	0.2817	0.4942	0.7027	0.3722	0.6	0.31	0.55	0.69	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.30184	NA	NA	0.619789	0.659817	NA	0.616	NA	3.785811
1273	17	40737117	40737117	G	A	intronic	FAM134C	NA	NA	NA	intronic	ENSG00000141699	NA	NA	NA	NA	NA	17q21.2	NA	NA	Name=5	NA	rs4792992	0.4	0.4	0.38	0.35643	0.4274	0.5298	0.4452	0.1619	0.3047	0.42	0.53	0.48	0.16	0.3833	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.400116	1.400116	NA	0.403605	0.199728	NA	0.261	NA	3.785695
1273	1	55074840	55074840	T	A	UTR3	ACOT11	NM_147161:c.*55T>A	NA	NA	UTR3	ENSG00000162390	ENST00000343744:c.*55T>A	NA	NA	NA	NA	1p32.3	NA	NA	NA	NA	rs1617287	0.32	0.32	0.279	0.276757	0.5477	0.1825	0.353	0.0946	0.2873	0.54	0.16	0.4	0.11	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.128318	NA	NA	NA	NA	NA	0.283	NA	3.7856334
1273	8	49987910	49987910	G	A	UTR3	C8orf22	NM_001256596:c.*178G>A,NM_001256597:c.*178G>A,NM_001007176:c.*104G>A,NM_001256598:c.*820G>A	NA	NA	UTR3	ENSG00000168333	ENST00000517663:c.*178G>A,ENST00000522267:c.*178G>A,ENST00000399653:c.*104G>A,ENST00000303202:c.*820G>A	NA	NA	NA	NA	8q11.21	NA	NA	NA	NA	rs6984804	0.64	0.64	0.617	0.602037	0.5477	0.7857	0.6513	0.6112	0.4213	0.55	0.83	0.63	0.56	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.431433	NA	NA	NA	NA	NA	0.601	NA	3.7856334
1273	17	3629698	3629698	A	G	UTR3	GSG2	NM_031965:c.*72A>G	NA	NA	UTR3	ENSG00000177602	ENST00000325418:c.*72A>G	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs170208	0.36	0.36	0.35	0.369409	0.5477	0.3363	0.3069	0.0915	0.6401	0.55	0.35	0.36	0.1	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.043909	NA	NA	NA	NA	NA	0.37	NA	3.7856334
1273	6	133849789	133849789	A	G	intronic	EYA4	NA	NA	NA	ncRNA_intronic	ENSG00000227954	NA	NA	NA	NA	NA	6q23.2	NA	NA	NA	NA	rs3822939	0.72	0.72	0.717	0.770367	0.5477	0.8194	0.6916	0.9281	0.7914	0.55	0.82	0.67	0.91	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-3.265828	NA	NA	NA	NA	NA	0.819	NA	3.7856333
1273	8	109664963	109664963	C	T	intergenic	EMC2,TMEM74	dist=165827;dist=130383	NA	NA	ncRNA_exonic	ENSG00000253580	NA	NA	NA	NA	NA	8q23.1	NA	NA	NA	NA	rs2935751	0.21	0.21	0.176	0.179712	0.2147	0.2817	0.1988	0.0983	0.135	0.22	0.26	0.22	0.14	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.59328	NA	NA	NA	NA	NA	0.217	NA	3.7853
1273	9	100324893	100324893	T	A	intronic	TMOD1	NA	NA	NA	intronic	ENSG00000136842	NA	NA	NA	NA	NA	9q22.33	NA	NA	NA	NA	rs2297163	0.2	0.2	0.195	0.224641	0.2147	0.246	0.1412	0.1815	0.3303	0.22	0.22	0.13	0.19	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.141488	NA	NA	NA	NA	NA	0.167	NA	3.7853
1273	10	73511658	73511658	G	A	intronic	C10orf54,CDH23	NA	NA	NA	intronic	ENSG00000107736,ENSG00000107738	NA	NA	NA	NA	NA	10q22.1	NA	NA	NA	NA	rs74649893	0.03	0.03	0.033	0.0351438	0.0686	0.002	0.036	0.0045	0.0757	0.06	0.0035	0.04	0.01	0.0655	0.081	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.147497	NA	NA	0.0806	0.01498	NA	0.058	NA	3.7853
1273	12	6030154	6030154	G	A	intronic	ANO2	NA	NA	NA	intronic	ENSG00000047617	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs3825331	0.16	0.16	0.127	0.147564	0.2147	0.1855	0.1427	0.0431	0.184	0.21	0.18	0.17	0.03	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.423332	NA	NA	NA	NA	NA	0.08	NA	3.7853
1273	12	70951797	70951797	C	T	intronic	PTPRB	NA	NA	NA	intronic	ENSG00000127329	NA	NA	NA	NA	NA	12q15	NA	NA	NA	NA	rs3782374	0.17	0.17	0.183	0.199481	0.2147	0.1359	0.1499	0.1808	0.3098	0.22	0.13	0.14	0.19	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.363764	NA	NA	NA	NA	NA	0.232	NA	3.7853
1273	13	31848823	31848823	A	G	intronic	B3GALTL	NA	NA	NA	intronic	ENSG00000187676	NA	NA	NA	NA	NA	13q12.3	NA	NA	NA	NA	rs728930	0.21	0.21	0.191	0.203474	0.2147	0.248	0.1931	0.1626	0.2086	0.22	0.27	0.17	0.16	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.127658	NA	NA	NA	NA	NA	0.312	NA	3.7853
1273	15	63946203	63946203	G	A	intronic	HERC1	NA	NA	NA	intronic	ENSG00000103657	NA	NA	NA	NA	NA	15q22.31	NA	NA	NA	NA	rs17185876	0.14	0.14	0.15	0.134784	0.2147	0.001	0.1124	0.1399	0.1994	0.23	0.0017	0.14	0.15	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.549855	NA	NA	NA	NA	NA	0.087	NA	3.7853
1273	19	7681351	7681351	G	A	intronic	CAMSAP3	NA	NA	NA	intronic	ENSG00000076826	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs807812	0.16	0.16	0.114	0.140375	0.2147	0.1171	0.1715	0.1142	0.1012	0.21	0.12	0.17	0.12	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.635656	NA	NA	NA	NA	NA	0.145	NA	3.7853
1273	20	6100031	6100031	G	A	intronic	FERMT1	NA	NA	NA	intronic	ENSG00000101311	NA	NA	NA	NA	NA	20p12.3	NA	NA	NA	NA	rs78449803	0.04	0.04	0.039	0.0329473	0.0825	0.002	0.0778	0.0045	0.0204	0.08	NA	0.08	0.01	0.0548	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.70642	NA	NA	0.077442	0.017249	NA	0.043	NA	3.785258
1273	7	2290685	2290685	C	T	UTR3	NUDT1	NM_198949:c.*49C>T,NM_198948:c.*49C>T,NM_002452:c.*49C>T,NM_198950:c.*49C>T,NM_198952:c.*49C>T,NM_198954:c.*49C>T,NM_198953:c.*49C>T	NA	NA	UTR3	ENSG00000106268	ENST00000397049:c.*49C>T,ENST00000356714:c.*49C>T,ENST00000397046:c.*49C>T,ENST00000397048:c.*49C>T,ENST00000339737:c.*49C>T,ENST00000343985:c.*49C>T	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs1062492	0.13	0.13	0.131	0.130591	0.1948	0.0605	0.196	0.0439	0.2076	0.19	0.08	0.19	0.06	0.1684	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.229271	NA	NA	0.184927	0.06179	NA	0.08	NA	3.7852064
1273	17	39767744	39767744	A	G	exonic	KRT16	NA	synonymous SNV	KRT16:NM_005557:exon3:c.T624C:p.H208H	exonic	ENSG00000186832	NA	synonymous SNV	ENSG00000186832:ENST00000301653:exon3:c.T624C:p.H208H	NA	NA	17q21.2	NA	NA	NA	NA	rs4796681	0.75	0.75	0.727	0.774161	0.6123	1	0.7608	0.7239	0.7853	0.61	1	0.73	0.7	0.6833	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.089007	NA	NA	0.586047	0.710849	NA	0.732	NA	3.7850196
1274	3	12845166	12845166	C	T	intronic	CAND2	NA	NA	NA	intronic	ENSG00000144712	NA	NA	NA	NA	NA	3p25.2	NA	NA	NA	NA	rs75214970	0.07	0.07	0.055	0.0984425	0.0716	0.1845	0.0677	0.003	0.1881	0.06	0.13	0.08	0.01	0.0771	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.028606	NA	NA	0.06651	0.01946	NA	0.051	NA	3.78479
1274	6	31083664	31083664	G	A	UTR3	CDSN	NM_001264:c.*138C>T	NA	NA	UTR3	ENSG00000204539	ENST00000376288:c.*138C>T	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs1042134	0.62	0.62	0.59	0.646965	0.5487	0.7113	0.6138	0.7065	0.6247	0.53	0.68	0.62	0.68	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.427462	NA	NA	NA	NA	NA	0.572	NA	3.7846334
1274	7	130137692	130137692	A	G	intronic	MEST	NA	NA	NA	ncRNA_exonic	ENSG00000270823	NA	NA	NA	NA	NA	7q32.2	NA	NA	NA	NA	rs2072574	0.46	0.46	0.396	0.420128	0.5487	0.6131	0.5259	0.0545	0.5082	0.54	0.64	0.51	0.08	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.451496	NA	NA	NA	NA	NA	0.399	NA	3.7846333
1274	4	119401616	119401616	T	C	intergenic	PRSS12,CEP170P1	dist=127694;dist=35879	NA	NA	ncRNA_intronic	ENSG00000154608	NA	NA	NA	NA	NA	4q26	NA	NA	NA	NA	rs7659863	0.19	0.19	0.147	0.193291	0.2157	0.2361	0.1513	0.112	0.2658	0.23	0.23	0.18	0.11	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.542415	NA	NA	NA	NA	NA	0.036	NA	3.7843
1274	10	94967056	94967056	A	C	intergenic	CYP26A1,MYOF	dist=129415;dist=99130	NA	NA	ncRNA_exonic	ENSG00000237417	NA	NA	NA	NA	NA	10q23.33	NA	NA	NA	NA	rs35708466	0.15	0.15	0.141	0.145966	0.2157	0.0704	0.1153	0.1475	0.1718	0.23	0.04	0.15	0.16	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.570462	NA	NA	NA	NA	NA	0.196	NA	3.7843
1274	12	50642314	50642314	A	G	intronic	LIMA1	NA	NA	NA	intronic	ENSG00000050405	NA	NA	NA	NA	NA	12q13.12	NA	NA	NA	NA	rs3815671	0.34	0.34	0.316	0.333666	0.2157	0.6369	0.4251	0.2005	0.2577	0.22	0.61	0.36	0.18	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.038823	NA	NA	NA	NA	NA	0.29	NA	3.7843
1274	14	95581899	95581899	G	A	intronic	DICER1	NA	NA	NA	intronic	ENSG00000100697	NA	NA	NA	NA	NA	14q32.13	NA	NA	NA	NA	rs2275182	0.17	0.17	0.164	0.165735	0.2157	0.0397	0.1354	0.3139	0.0654	0.21	0.04	0.14	0.28	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.515429	NA	NA	NA	NA	NA	0.326	NA	3.7843
1274	14	107057408	107057408	A	G	intergenic	LINC00221,NONE	dist=105879;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000253689	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs6576195	0.34	0.34	0.308	0.398562	0.2157	0.502	0.353	0.348	0.5808	0.21	0.49	0.31	0.38	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.031689	NA	NA	NA	NA	ID=COSN393184;OCCURENCE=1(lung)	0.29	NA	3.7843
1274	19	8045862	8045862	G	A	intronic	ELAVL1	NA	NA	NA	intronic	ENSG00000066044	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs75461160	0.1	0.1	0.119	0.0770767	0.2157	0.002	0.0965	0.0416	0.046	0.22	0.0017	0.1	0.05	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.611456	NA	NA	NA	NA	NA	0.123	NA	3.7843
1274	17	7187123	7187123	T	C	exonic	SLC2A4	NA	synonymous SNV	SLC2A4:NM_001042:exon4:c.T390C:p.N130N	exonic	ENSG00000181856	NA	synonymous SNV	ENSG00000181856:ENST00000317370:exon4:c.T390C:p.N130N,ENSG00000181856:ENST00000424875:exon4:c.T360C:p.N120N,ENSG00000181856:ENST00000570783:exon4:c.T390C:p.N130N,ENSG00000181856:ENST00000571308:exon4:c.T390C:p.N130N,ENSG00000181856:ENST00000572485:exon4:c.T390C:p.N130N	NA	NA	17p13.1	NA	NA	NA	NA	rs5435	0.68	0.68	0.677	0.697484	0.6064	0.625	0.6081	0.913	0.638	0.59	0.64	0.61	0.89	0.6525	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.577709	NA	NA	0.623605	0.843395	NA	0.667	NA	3.7841616
1274	9	33618497	33618497	G	A	intergenic	ANKRD18B,ANXA2P2	dist=45496;dist=5726	NA	NA	exonic	ENSG00000205274	NA	nonsynonymous SNV	ENSG00000205274:ENST00000379435:exon2:c.G383A:p.S128N	NA	NA	9p13.3	NA	NA	NA	NA	rs2380835	0.45	0.45	0.414	0.427516	0.5457	0.5228	0.5058	0.1195	0.5685	0.55	0.53	0.52	0.12	0.5035	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.926191	1.926191	0	NA	NA	NA	0.319	NA	3.7841334
1274	19	54801916	54801916	A	G	intronic	LILRA3	NA	NA	NA	intronic	ENSG00000170866	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs3815937	0.19	0.19	0.185	0.209465	0.0437	0.1389	0.1527	0.4387	0.183	0.05	0.2	0.15	0.44	0.1158	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.432206	NA	NA	0.056367	0.407661	NA	0.21	NA	3.784133
1274	12	56525230	56525230	G	C	intronic	ESYT1	NA	NA	NA	intronic	ENSG00000139641	NA	NA	NA	NA	NA	12q13.2	NA	NA	NA	NA	rs73125289	0.03	0.03	0.015	0.0263578	0.0706	NA	0.0375	0.0023	0.0327	0.06	NA	0.04	0.01	0.0562	0.089	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.693663	NA	NA	0.089186	0.017249	NA	0.043	NA	3.784014
1274	15	91168976	91168976	T	C	intronic	CRTC3	NA	NA	NA	ncRNA_intronic	ENSG00000259736	NA	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs3743405	0.17	0.17	0.161	0.179313	0.1918	0.2073	0.111	0.1936	0.1667	0.19	0.15	0.12	0.21	0.17	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.092386	NA	NA	0.187529	0.189035	NA	0.094	NA	3.7840043
1274	6	31382911	31382911	A	G	exonic	MICA	NA	nonsynonymous SNV	MICA:NM_000247:exon7:c.A1147G:p.T383A	ncRNA_UTR3	ENSG00000204520	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs1882	0.68	0.68	0.652	0.723243	0.5805	0.7778	0.8112	0.6982	0.7853	0.55	0.76	0.8	0.72	0.6222	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.128786	NA	0	0.513514	0.646676	NA	0.471	NA	3.783786
1274	4	68374597	68374597	C	T	exonic	CENPC1	NA	synonymous SNV	CENPC1:NM_001812:exon10:c.G1839A:p.S613S	exonic	ENSG00000145241	NA	synonymous SNV	ENSG00000145241:ENST00000513216:exon6:c.G1560A:p.S520S,ENSG00000145241:ENST00000273853:exon10:c.G1839A:p.S613S	NA	NA	4q13.2	NA	NA	NA	NA	rs1056789	0.69	0.69	0.665	0.700479	0.6252	0.8264	0.7536	0.6195	0.7198	0.61	0.82	0.73	0.62	0.6546	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.503211	NA	NA	0.603113	0.635733	NA	0.775	NA	3.7837536
1274	16	19518945	19518945	G	A	intronic	GDE1	NA	NA	NA	intronic	ENSG00000006007	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs11860778	0.23	0.23	0.217	0.220647	0.0746	0.3839	0.2522	0.261	0.1258	0.07	0.37	0.21	0.31	0.1418	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.190394	NA	NA	NA	NA	NA	0.203	NA	3.7836
1274	5	135276314	135276314	C	T	exonic	FBXL21	NA	unknown	UNKNOWN	exonic	ENSG00000164616	NA	unknown	UNKNOWN	Score=597;Name=lod=355	NA	5q31.1	NA	NA	NA	NA	rs40986	0.79	0.79	0.765	0.813698	0.7197	0.7808	0.7968	0.9175	0.816	0.73	0.78	0.77	0.89	0.7658	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.561598	NA	NA	0.730985	0.891725	NA	0.674	NA	3.783515
1274	1	200183398	200183398	C	A	intergenic	NR5A2,LINC00862	dist=36848;dist=128274	NA	NA	ncRNA_exonic	ENSG00000233827	NA	NA	NA	Score=481;Name=lod=120	NA	1q32.1	NA	NA	NA	NA	rs10919847	0.62	0.62	0.614	0.663938	0.3439	0.8452	0.5965	0.8525	0.5992	0.33	0.85	0.54	0.85	0.5119	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.290659	2.290659	NA	0.360698	0.785974	NA	0.696	NA	3.783502
1274	2	165793968	165793968	G	A	intronic	SLC38A11	NA	NA	NA	intronic	ENSG00000169507	NA	NA	NA	NA	NA	2q24.3	NA	NA	NA	NA	rs17353624	0.04	0.04	0.04	0.058107	0.0686	0.0089	0.0793	0.0484	0.0961	0.06	0.01	0.06	0.04	0.0714	0.077	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.295278	1.295278	NA	0.076628	0.061961	NA	0.138	NA	3.783372
1274	3	197574248	197574248	T	G	intronic	LRCH3	NA	NA	NA	intronic	ENSG00000186001	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs73089359	0.11	0.11	0.098	0.113618	0.0736	0.1845	0.0908	0.1188	0.091	0.08	0.17	0.07	0.11	0.0817	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.947594	NA	NA	0.061395	0.094871	NA	0.08	NA	3.783305
1274	4	37841942	37841942	T	C	intronic	PGM2	NA	NA	NA	intronic	ENSG00000169299	NA	NA	NA	NA	NA	4p14	NA	NA	NA	NA	rs2714559	0.34	0.34	0.363	0.359425	0.2167	0.3046	0.2839	0.708	0.1452	0.21	0.26	0.27	0.68	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.300817	NA	NA	NA	NA	NA	0.428	NA	3.7833
1274	6	15507250	15507250	G	A	intronic	JARID2	NA	NA	NA	intronic	ENSG00000008083	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs35947355	0.12	0.12	0.111	0.108227	0.2167	0.002	0.1239	0.1051	0.0992	0.21	NA	0.15	0.09	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.858909	NA	NA	NA	NA	NA	0.188	NA	3.7833
1274	6	33131893	33131893	C	T	intronic	COL11A2	NA	NA	NA	intronic	ENSG00000204248	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs9405002	0.29	0.29	0.275	0.270567	0.2167	0.4464	0.3516	0.174	0.2178	0.22	0.42	0.39	0.17	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.199998	NA	NA	NA	NA	NA	0.333	NA	3.7833
1274	8	92374753	92374753	A	G	intronic	SLC26A7	NA	NA	NA	intronic	ENSG00000147606	NA	NA	NA	NA	NA	8q21.3	NA	NA	NA	NA	rs17722765	0.11	0.11	0.124	0.127796	0.2167	0.0079	0.1542	0.0908	0.1912	0.2	0.01	0.15	0.07	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.422966	NA	NA	NA	NA	NA	0.188	NA	3.7833
1274	9	129728012	129728012	T	A	intronic	RALGPS1	NA	NA	NA	intronic	ENSG00000136828	NA	NA	NA	NA	NA	9q33.3	NA	NA	NA	NA	rs10819257	0.22	0.22	0.205	0.235423	0.2167	0.4226	0.1931	0.0113	0.3947	0.2	0.42	0.2	0.02	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.52965	NA	NA	NA	NA	NA	0.246	NA	3.7833
1274	10	95419032	95419032	C	A	intronic	PDE6C	NA	NA	NA	intronic	ENSG00000095464	NA	NA	NA	NA	NA	10q23.33	NA	NA	NA	NA	rs720298	0.26	0.26	0.25	0.25619	0.2167	0.2619	0.2133	0.3608	0.18	0.21	0.26	0.23	0.34	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.556628	NA	NA	NA	NA	ID=COSN163711;OCCURENCE=1(breast)	0.304	NA	3.7833
1274	12	117594372	117594372	G	A	intronic	FBXO21	NA	NA	NA	intronic	ENSG00000135108	NA	NA	NA	NA	NA	12q24.22	NA	NA	NA	NA	rs10850776	0.21	0.21	0.209	0.222244	0.2167	0.4226	0.1715	0.028	0.32	0.21	0.38	0.19	0.04	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.083377	NA	NA	NA	NA	NA	0.188	NA	3.7833
1274	21	47805663	47805663	C	G	intronic	PCNT	NA	NA	NA	intronic	ENSG00000160299	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs2073378	0.3	0.3	0.32	0.338858	0.2167	0.2044	0.2767	0.5923	0.3047	0.23	0.21	0.24	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.200303	NA	NA	NA	NA	NA	0.348	NA	3.7833
1274	8	139668120	139668120	C	T	intronic	COL22A1	NA	NA	NA	intronic	ENSG00000169436	NA	NA	NA	NA	NA	8q24.23	NA	NA	NA	NA	rs73445463	0.05	0.05	0.038	0.0373403	0.0805	0.0188	0.0389	0.028	0.0235	0.08	0.02	0.04	0.03	0.0625	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.092487	NA	NA	0.073721	0.037903	NA	0.014	NA	3.783279
1274	19	55044387	55044387	T	C	ncRNA_intronic	KIR3DX1	NA	NA	NA	intronic	ENSG00000104970	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs62131628	0.54	0.54	0.513	0.511581	0.5507	0.7798	0.5576	0.2519	0.5133	0.54	0.8	0.54	0.25	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.69806	NA	NA	NA	NA	NA	0.493	NA	3.7826333
1274	9	33618358	33618358	A	G	intergenic	ANKRD18B,ANXA2P2	dist=45357;dist=5865	NA	NA	exonic	ENSG00000205274	NA	nonsynonymous SNV	ENSG00000205274:ENST00000379435:exon2:c.A244G:p.T82A	NA	NA	9p13.3	NA	NA	NA	NA	rs855512	0.47	0.47	0.453	0.449281	0.5437	0.5198	0.5187	0.1967	0.5716	0.55	0.53	0.54	0.22	0.5072	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.881055	NA	0.04	NA	NA	NA	0.384	NA	3.7824334
1274	1	8397803	8397803	C	T	intronic	SLC45A1	NA	NA	NA	intronic	ENSG00000162426	NA	NA	NA	NA	NA	1p36.23	NA	NA	NA	NA	rs7520373	0.34	0.34	0.305	0.313698	0.2177	0.6438	0.3746	0.1573	0.2403	0.22	0.68	0.32	0.15	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.009837	NA	NA	NA	NA	NA	0.21	NA	3.7823
1274	3	172321768	172321768	C	T	intergenic	TNFSF10,NCEH1	dist=80471;dist=26667	NA	NA	ncRNA_exonic	ENSG00000224426	NA	NA	NA	NA	NA	3q26.31	NA	NA	NA	NA	rs17524400	0.16	0.16	0.152	0.140176	0.2177	0.1528	0.1888	0.0325	0.1585	0.21	0.16	0.23	0.03	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.04669	NA	NA	NA	NA	NA	0.21	NA	3.7823
1274	5	7521083	7521083	G	A	intronic	ADCY2	NA	NA	NA	intronic	ENSG00000078295	NA	NA	NA	NA	NA	5p15.31	NA	NA	NA	NA	rs3828628	0.22	0.22	0.229	0.226837	0.2177	0.3165	0.183	0.0946	0.3538	0.21	0.34	0.22	0.08	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.102076	NA	NA	NA	NA	NA	0.196	NA	3.7823
1274	5	153835378	153835378	C	G	intronic	SAP30L	NA	NA	NA	intronic	ENSG00000164576	NA	NA	NA	NA	NA	5q33.2	NA	NA	NA	NA	rs1007404	0.24	0.24	0.212	0.243411	0.2177	0.2946	0.4265	0.1195	0.2546	0.21	0.3	0.38	0.11	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.225736	NA	NA	NA	NA	NA	0.239	NA	3.7823
1274	7	2955097	2955097	C	T	intronic	CARD11	NA	NA	NA	intronic	ENSG00000198286	NA	NA	NA	NA	NA	7p22.2	NA	NA	NA	NA	rs2301920	0.36	0.36	0.345	0.400759	0.2177	0.6042	0.3847	0.3843	0.4131	0.22	0.59	0.33	0.35	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.167513	NA	NA	NA	NA	NA	0.283	NA	3.7823
1274	12	133313372	133313372	C	A	intronic	ANKLE2	NA	NA	NA	intronic	ENSG00000176915	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs7313956	0.39	0.39	0.379	0.372005	0.2177	0.6002	0.4496	0.3949	0.2096	0.22	0.61	0.42	0.39	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.932133	NA	NA	NA	NA	NA	0.37	NA	3.7823
1274	17	72862809	72862809	T	C	intronic	FDXR	NA	NA	NA	intronic	ENSG00000161513	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs509911	0.22	0.22	0.188	0.187101	0.2177	0.38	0.1585	0.0333	0.1851	0.22	0.4	0.16	0.03	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.265972	NA	NA	NA	NA	NA	0.167	NA	3.7823
1274	17	74015819	74015819	A	T	intronic	EVPL	NA	NA	NA	intronic	ENSG00000167880	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs79643517	0.13	0.13	NA	0.14377	0.2177	0.004	0.1383	0.1505	0.2065	0.2	0.0017	0.16	0.17	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.623401	NA	NA	NA	NA	NA	0.261	NA	3.7823
1274	19	36017469	36017469	C	T	intronic	SBSN	NA	NA	NA	intronic	ENSG00000189001	NA	NA	NA	NA	NA	19q13.12	NA	NA	NA	NA	rs62113963	0.18	0.18	0.188	0.196086	0.2177	0.1359	0.1398	0.2398	0.2168	0.21	0.11	0.17	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.777276	NA	NA	NA	NA	NA	0.21	NA	3.7823
1274	19	51010692	51010692	T	C	intronic	JOSD2	NA	NA	NA	intronic	ENSG00000161677	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs7257671	0.28	0.28	0.288	0.30012	0.2177	0.0744	0.2651	0.6528	0.1656	0.2	0.05	0.3	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.088314	NA	NA	NA	NA	NA	0.29	NA	3.7823
1274	22	42191636	42191636	A	G	intronic	MEI1	NA	NA	NA	intronic	ENSG00000167077	NA	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs139559	0.33	0.33	0.303	0.360423	0.2177	0.0913	0.5403	0.6354	0.2853	0.21	0.09	0.52	0.64	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.783887	NA	NA	NA	NA	ID=COSN166764;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.377	NA	3.7823
1274	19	48533741	48533741	T	G	UTR3	CABP5	NM_019855:c.*73A>C	NA	NA	UTR3	ENSG00000105507	ENST00000293255:c.*73A>C	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs35341698	0.17	0.17	0.14	0.162141	0.2704	0.0347	0.2363	0.1362	0.1646	0.26	0.04	0.27	0.12	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.588465	1.588465	NA	0.280641	0.128613	NA	0.188	NA	3.7822924
1274	7	23293746	23293746	A	G	intronic	GPNMB	NA	NA	NA	intronic	ENSG00000136235	NA	NA	NA	NA	NA	7p15.3	NA	NA	Name=32	NA	rs199347	0.48	0.48	0.496	0.516773	0.3827	0.2837	0.3963	0.9584	0.3834	0.37	0.27	0.42	0.95	0.4222	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.583541	NA	NA	0.412907	0.855424	NA	0.486	NA	3.782193
1274	22	23029698	23029698	T	C	intergenic	GGTLC2,MIR650	dist=39330;dist=135572	NA	NA	exonic	ENSG00000211659	NA	synonymous SNV	ENSG00000211659:ENST00000390305:exon2:c.T300C:p.D100D	Score=475;Name=lod=114	NA	22q11.22	NA	Name=PU.1	NA	NA	rs443756	0.96	0.96	0.954	0.971446	0.9056	1	0.9539	0.9992	0.9847	0.9	1	0.93	1	0.9238	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.216259	NA	NA	0.888464	0.977419	NA	0.826	NA	3.782136
1274	14	100172899	100172899	A	G	intronic	CYP46A1	NA	NA	NA	UTR5	ENSG00000036530	ENST00000554176:c.-101A>G	NA	NA	NA	NA	14q32.2	NA	NA	NA	NA	rs2273839	0.28	0.28	0.29	0.289137	0.3847	0.2222	0.2594	0.2065	0.3926	0.39	0.2	0.26	0.2	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.49031	NA	NA	NA	NA	NA	0.29	NA	3.7819667
1274	5	109181682	109181682	A	T	exonic	MAN2A1	NA	synonymous SNV	MAN2A1:NM_002372:exon18:c.A2817T:p.S939S	exonic	ENSG00000112893	NA	synonymous SNV	ENSG00000112893:ENST00000261483:exon18:c.A2817T:p.S939S	NA	NA	5q21.3	NA	NA	NA	NA	rs3186988	0.75	0.75	0.769	0.746805	0.6093	0.8819	0.6369	0.9047	0.6135	0.61	0.89	0.62	0.88	0.6546	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.714521	NA	NA	0.62093	0.855359	NA	0.725	NA	3.7818366
1274	17	34305164	34305164	A	C	intronic	CCL16	NA	NA	NA	intronic	ENSG00000161573	NA	NA	NA	NA	NA	17q12	NA	NA	NA	NA	rs11080369	0.09	0.09	0.08	0.104233	0.0716	0.0694	0.1628	0.1619	0.0542	0.07	0.04	0.13	0.15	0.08	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.172666	NA	NA	0.066628	0.14049	NA	0.123	NA	3.781772
1274	1	153122310	153122310	G	A	UTR3	SPRR2G	NM_001014291:c.*55C>T	NA	NA	UTR3	ENSG00000159516	ENST00000368748:c.*55C>T	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs510277	0.48	0.48	0.483	0.426518	0.5517	0.5149	0.4294	0.208	0.5	0.54	0.56	0.51	0.27	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.038651	NA	NA	NA	NA	NA	0.464	NA	3.7816334
1274	5	79351411	79351411	T	C	intronic	THBS4	NA	NA	NA	ncRNA_intronic	ENSG00000249825	NA	NA	NA	NA	NA	5q14.1	NA	NA	NA	NA	rs426623	0.56	0.56	NA	0.569089	0.5517	0.5139	0.5476	0.652	0.547	0.54	0.51	0.56	0.64	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.107055	NA	NA	NA	NA	NA	0.514	NA	3.7816333
1274	5	79351544	79351544	G	A	intronic	THBS4	NA	NA	NA	ncRNA_intronic	ENSG00000249825	NA	NA	NA	NA	NA	5q14.1	NA	NA	NA	NA	rs412379	0.56	0.56	0.561	0.569289	0.5517	0.5139	0.5476	0.6536	0.546	0.54	0.51	0.56	0.64	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.582827	NA	NA	NA	NA	NA	0.507	NA	3.7816333
1274	1	175097357	175097357	C	G	intronic	TNN	NA	NA	NA	intronic	ENSG00000120332	NA	NA	NA	NA	NA	1q25.1	NA	NA	NA	NA	rs2269652	0.26	0.26	0.257	0.247404	0.2187	0.2609	0.2363	0.32	0.1728	0.22	0.28	0.22	0.31	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.186693	NA	NA	NA	NA	NA	0.188	NA	3.7813
1274	6	18459736	18459736	A	C	intronic	RNF144B	NA	NA	NA	intronic	ENSG00000137393	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs2057555	0.25	0.25	0.231	0.230831	0.2187	0.1677	0.2089	0.3563	0.1544	0.22	0.18	0.2	0.38	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.70831	NA	NA	NA	NA	NA	0.297	NA	3.7813
1274	12	117603161	117603161	T	C	intronic	FBXO21	NA	NA	NA	intronic	ENSG00000135108	NA	NA	NA	NA	NA	12q24.22	NA	NA	NA	NA	rs2270791	0.23	0.23	0.238	0.243011	0.2187	0.4425	0.1873	0.0855	0.3149	0.22	0.4	0.2	0.09	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.739688	NA	NA	NA	NA	NA	0.246	NA	3.7813
1274	12	117611934	117611934	C	T	intronic	FBXO21	NA	NA	NA	intronic	ENSG00000135108	NA	NA	NA	NA	NA	12q24.22	NA	NA	NA	NA	rs57632063	0.23	0.23	0.214	0.241613	0.2187	0.4435	0.1859	0.0756	0.3211	0.22	0.4	0.2	0.08	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.397801	NA	NA	NA	NA	NA	0.232	NA	3.7813
1274	12	117612357	117612357	T	C	intronic	FBXO21	NA	NA	NA	intronic	ENSG00000135108	NA	NA	NA	NA	NA	12q24.22	NA	NA	NA	NA	rs3817015	0.23	0.23	0.23	0.243011	0.2187	0.4435	0.1873	0.0855	0.3139	0.22	0.4	0.2	0.09	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.173709	NA	NA	NA	NA	NA	0.246	NA	3.7813
1274	13	51953541	51953541	C	T	intronic	INTS6	NA	NA	NA	intronic	ENSG00000102786	NA	NA	NA	NA	NA	13q14.3	NA	NA	NA	NA	rs2274061	0.21	0.21	0.185	0.247204	0.2187	0.2183	0.1801	0.2239	0.3855	0.22	0.19	0.18	0.23	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.161456	NA	NA	NA	NA	NA	0.239	NA	3.7813
1274	13	51963348	51963348	T	C	intronic	INTS6	NA	NA	NA	intronic	ENSG00000102786	NA	NA	NA	NA	NA	13q14.3	NA	NA	NA	NA	rs2274929	0.21	0.21	0.201	0.248403	0.2187	0.2183	0.1816	0.2269	0.3865	0.22	0.19	0.18	0.23	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.347182	NA	NA	NA	NA	NA	0.246	NA	3.7813
1274	19	52381862	52381862	C	A	intronic	ZNF577	NA	NA	NA	intronic	ENSG00000161551	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs12150982	0.31	0.31	0.305	0.378994	0.2187	0.3006	0.2781	0.5257	0.498	0.21	0.31	0.3	0.49	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.044289	NA	NA	NA	NA	NA	0.355	NA	3.7813
1274	20	3276821	3276821	C	T	intronic	C20orf194	NA	NA	NA	intronic	ENSG00000088854	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs2236103	0.24	0.24	0.26	0.23762	0.2187	0.1657	0.1873	0.3767	0.1789	0.22	0.19	0.15	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.646629	NA	NA	NA	NA	NA	0.283	NA	3.7813
1274	20	3296279	3296279	G	A	intronic	C20orf194	NA	NA	NA	intronic	ENSG00000088854	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs2236115	0.24	0.24	0.261	0.237819	0.2187	0.1657	0.1873	0.3767	0.18	0.22	0.19	0.15	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.009489	NA	NA	NA	NA	NA	0.283	NA	3.7813
1274	21	34837786	34837786	A	G	intronic	TMEM50B	NA	NA	NA	intronic	ENSG00000142188,ENSG00000159128	NA	NA	NA	NA	NA	21q22.11	NA	NA	NA	NA	rs2243511	0.28	0.28	0.262	0.286941	0.2187	0.4266	0.2176	0.2027	0.3763	0.23	0.44	0.24	0.2	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.544325	NA	NA	NA	NA	NA	0.246	NA	3.7813
1274	21	46924931	46924931	G	A	intronic	COL18A1	NA	NA	NA	intronic	ENSG00000173638,ENSG00000182871	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs9980752	0.21	0.21	0.188	0.215455	0.2187	0.3175	0.2133	0.0628	0.3149	0.21	0.29	0.25	0.07	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.487668	NA	NA	NA	NA	NA	0.094	NA	3.7813
1274	22	50169157	50169157	A	G	intronic	BRD1	NA	NA	NA	intronic	ENSG00000100425	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs138823	0.36	0.36	0.396	0.422324	0.2187	0.2004	0.1974	0.8442	0.4499	0.23	0.19	0.21	0.85	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.50465	NA	NA	NA	NA	NA	0.435	NA	3.7813
1274	9	79014173	79014173	A	G	ncRNA_exonic	RPSAP9	NA	NA	NA	ncRNA_exonic	ENSG00000234618	NA	NA	NA	Score=810;Name=lod=2616	NA	9q21.13	NA	NA	NA	NA	rs7033581	0.97	0.97	0.961	0.967452	0.9344	0.998	0.9625	0.9962	0.9346	0.94	1	0.96	0.99	0.9511	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.060398	NA	NA	NA	NA	NA	0.804	NA	3.7811666
1274	X	295097	295097	C	T	UTR3	PPP2R3B	NM_013239:c.*5G>A	NA	NA	UTR3	ENSG00000167393	ENST00000390665:c.*5G>A	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs14127	0.24	0.24	0.21463	NA	NA	NA	NA	NA	NA	0.3	0.22	0.24	0.16	0.2741	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.009477	NA	NA	0.278188	0.189311	NA	0.181	NA	3.7810454
1274	19	52471785	52471785	T	A	intronic	ZNF350	NA	NA	NA	ncRNA_intronic	ENSG00000269235	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs2278418	0.25	0.25	0.26	0.266973	0.1889	0.2371	0.1801	0.3744	0.2945	0.2	0.21	0.18	0.41	0.2078	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.334806	NA	NA	0.15593	0.375397	NA	0.261	NA	3.7807033
1274	5	109125258	109125258	C	G	intronic	MAN2A1	NA	NA	NA	intronic	ENSG00000112893	NA	NA	NA	NA	NA	5q21.3	NA	NA	NA	NA	rs17162241	0.06	0.06	0.06	0.0854633	0.0606	0.005	0.0403	0.177	0.1022	0.05	NA	0.06	0.15	0.0937	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.028218	NA	NA	0.064999	0.133638	NA	0.065	NA	3.780701
1274	5	79354702	79354702	C	T	intronic	THBS4	NA	NA	NA	ncRNA_intronic	ENSG00000249825	NA	NA	NA	NA	NA	5q14.1	NA	NA	NA	NA	rs411943	0.56	0.56	0.56	0.570288	0.5527	0.5198	0.5476	0.6483	0.5511	0.54	0.51	0.56	0.64	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.080195	NA	NA	NA	NA	NA	0.514	NA	3.7806333
1274	11	108693244	108693244	A	G	intronic	DDX10	NA	NA	NA	ncRNA_exonic	ENSG00000255379	NA	NA	NA	NA	NA	11q22.3	NA	NA	NA	NA	rs1824665	0.43	0.43	0.388	0.398962	0.5527	0.4345	0.585	0.0908	0.4888	0.56	0.43	0.59	0.11	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.355285	NA	NA	NA	NA	NA	0.399	NA	3.7806333
1274	17	6330403	6330403	A	G	intronic	AIPL1	NA	NA	NA	intronic	ENSG00000129221	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs925615	0.06	0.06	0.057	0.0593051	0.0736	0.0933	0.0346	0.0401	0.0532	0.07	0.07	0.03	0.04	0.0654	0.081	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.002294	2.002294	NA	0.080698	0.057876	NA	0.043	NA	3.780302
1274	6	38691352	38691352	C	T	intronic	DNAH8	NA	NA	NA	intronic	ENSG00000124721	NA	NA	NA	NA	NA	6p21.2	NA	NA	NA	NA	rs72856597	0.12	0.12	0.1	0.104832	0.2197	0.004	0.1571	0.0408	0.1401	0.23	0.0035	0.16	0.05	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.245984	NA	NA	NA	NA	NA	0.159	NA	3.7803
1274	6	38691360	38691360	C	T	intronic	DNAH8	NA	NA	NA	intronic	ENSG00000124721	NA	NA	NA	NA	NA	6p21.2	NA	NA	NA	NA	rs72856598	0.11	0.11	0.093	0.0970447	0.2197	0.004	0.1571	0.0113	0.1401	0.23	0.0035	0.16	0.01	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.49742	NA	NA	NA	NA	NA	0.152	NA	3.7803
1274	12	2937013	2937013	G	C	intronic	NRIP2	NA	NA	NA	intronic	ENSG00000053702,ENSG00000111203	NA	NA	NA	NA	NA	12p13.33	NA	NA	NA	NA	rs4765998	0.31	0.31	0.304	0.294928	0.2197	0.3304	0.2349	0.4909	0.1135	0.22	0.33	0.24	0.46	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.038593	NA	NA	NA	NA	NA	0.232	NA	3.7803
1274	16	24883316	24883316	T	G	intronic	SLC5A11	NA	NA	NA	intronic	ENSG00000158865	NA	NA	NA	NA	NA	16p12.1	NA	NA	NA	NA	rs2667745	0.14	0.14	0.131	0.138978	0.2197	0.0169	0.1527	0.174	0.1247	0.21	0.02	0.17	0.16	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.754691	NA	NA	NA	NA	NA	0.239	NA	3.7803
1274	16	24883338	24883338	C	T	intronic	SLC5A11	NA	NA	NA	intronic	ENSG00000158865	NA	NA	NA	NA	NA	16p12.1	NA	NA	NA	NA	rs2667746	0.14	0.14	0.13	0.138179	0.2197	0.0169	0.1527	0.171	0.1247	0.21	0.02	0.17	0.16	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.356421	NA	NA	NA	NA	NA	0.239	NA	3.7803
1274	22	50170937	50170937	G	A	intronic	BRD1	NA	NA	NA	intronic	ENSG00000100425	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs4469	0.33	0.33	0.367	0.390375	0.2197	0.2123	0.1902	0.7413	0.4172	0.23	0.2	0.21	0.72	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.130109	NA	NA	NA	NA	NA	0.464	NA	3.7803
1274	16	70016697	70016697	G	A	ncRNA_intronic	PDXDC2P	NA	NA	NA	ncRNA_intronic	ENSG00000196696	NA	NA	NA	NA	NA	16q22.1	NA	NA	NA	NA	rs8047236	0.61	0.61	0.64	0.689097	0.3857	0.8869	0.4625	0.9357	0.6247	0.36	0.82	0.47	0.85	0.5007	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.032935	NA	NA	NA	NA	NA	0.036	NA	3.7802666
1274	21	39947697	39947697	A	G	intronic	ERG	NA	NA	NA	intronic	ENSG00000157554	NA	NA	NA	NA	NA	21q22.2	NA	NA	NA	NA	rs8129955	0.13	0.13	0.146	0.128994	0.1133	0.0149	0.0677	0.2965	0.0798	0.13	0.02	0.06	0.3	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.449245	NA	NA	0.106537	0.247832	NA	0.167	NA	3.780163
1274	18	52895418	52895418	G	A	intronic	TCF4	NA	NA	NA	intronic	ENSG00000196628	NA	NA	NA	NA	NA	18q21.2	NA	NA	NA	NA	rs6567210	0.06	0.06	0.066	0.0764776	0.0845	0.005	0.0476	0.112	0.1145	0.08	0.0017	0.07	0.1	0.0655	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.218262	NA	NA	0.070233	0.109396	NA	0.051	NA	3.779767
1274	6	88366708	88366708	C	T	intronic	ORC3	NA	NA	NA	intronic	ENSG00000135336	NA	NA	NA	NA	NA	6q15	NA	NA	Name=41	NA	rs2307373	0.39	0.39	0.353	0.335064	0.4314	0.4782	0.4035	0.1551	0.2832	0.42	0.51	0.38	0.21	0.3873	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.403934	NA	NA	0.401628	0.192919	NA	0.449	NA	3.779672
1274	1	27089446	27089446	G	C	intronic	ARID1A	NA	NA	NA	intronic	ENSG00000117713	NA	NA	NA	NA	NA	1p36.11	NA	NA	NA	NA	rs34681611	0.05	0.05	0.035	0.0385383	0.0726	0.0288	0.049	0.0076	0.0481	0.07	0.03	0.06	0.01	0.0651	0.083	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.988815	NA	NA	0.082674	0.021788	NA	0.036	NA	3.779626
1274	X	1409420	1409420	G	T	intronic	CSF2RA	NA	NA	NA	intronic	ENSG00000198223	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs73618037	0.13	0.13	0.1097	NA	NA	NA	NA	NA	NA	0.09	0.11	0.13	0.2	0.1297	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.741372	NA	NA	0.090782	0.175216	NA	0.109	NA	3.779518
1274	3	124377196	124377196	G	A	intronic	KALRN	NA	NA	NA	intronic	ENSG00000160145	NA	NA	NA	NA	NA	3q21.2	NA	NA	NA	NA	rs10804562	0.2	0.2	0.181	0.182308	0.2207	0.255	0.2478	0.0915	0.1442	0.22	0.23	0.23	0.1	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.609934	NA	NA	NA	NA	NA	0.138	NA	3.7793
1274	7	2252986	2252986	G	A	intronic	MAD1L1	NA	NA	NA	intronic	ENSG00000002822	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs1002170	0.13	0.13	0.107	0.124601	0.2207	0.0565	0.2104	0.0182	0.1789	0.21	0.07	0.19	0.02	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.467713	NA	NA	NA	NA	ID=COSN167946;OCCURENCE=1(large_intestine)	0.065	NA	3.7793
1274	11	17483038	17483038	C	T	intronic	ABCC8	NA	NA	NA	intronic	ENSG00000006071	NA	NA	NA	NA	NA	11p15.1	NA	NA	NA	NA	rs2074317	0.12	0.12	0.117	0.100439	0.2207	0.0655	0.147	0.025	0.0818	0.21	0.06	0.17	0.03	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.33556	NA	NA	NA	NA	NA	0.152	NA	3.7793
1274	11	122677047	122677047	T	C	intronic	UBASH3B	NA	NA	NA	intronic	ENSG00000154127	NA	NA	NA	NA	NA	11q24.1	NA	NA	NA	NA	rs3819248	0.2	0.2	0.181	0.200479	0.2207	0.1171	0.304	0.1974	0.1963	0.2	0.14	0.32	0.17	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.345628	1.345628	NA	NA	NA	NA	0.225	NA	3.7793
1274	19	53886286	53886286	T	C	ncRNA_exonic	ZNF525	NA	NA	NA	UTR3	ENSG00000203326	ENST00000474037:c.*1014T>C,ENST00000467003:c.*1014T>C	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs4324256	0.69	0.69	0.661	0.695687	0.7207	0.6062	0.804	0.7042	0.6738	0.72	0.59	0.77	0.7	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.67711	NA	NA	NA	NA	NA	0.754	NA	3.7793
1274	20	62594899	62594899	G	A	intronic	ZNF512B	NA	NA	NA	intronic	ENSG00000196700	NA	NA	NA	NA	NA	20q13.33	NA	NA	NA	NA	rs817324	0.12	0.12	0.104	0.0938498	0.2207	0.0149	0.121	0.0552	0.0777	0.22	0.02	0.13	0.06	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.764725	NA	NA	NA	NA	NA	0.138	NA	3.7793
1274	7	148483760	148483760	G	A	intronic	CUL1	NA	NA	NA	intronic	ENSG00000055130	NA	NA	NA	NA	NA	7q36.1	Score=760;Name=V$MEF2_01	NA	NA	NA	rs2072406	0.7	0.7	0.69	0.704673	0.6074	0.6974	0.7478	0.8404	0.5982	0.61	0.68	0.69	0.86	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.106655	NA	NA	0.613451	0.770954	NA	0.63	NA	3.779149
1274	1	115600137	115600137	A	G	intronic	TSPAN2	NA	NA	NA	intronic	ENSG00000134198	NA	NA	NA	NA	NA	1p13.2	NA	NA	NA	NA	rs3738704	0.09	0.09	0.08	0.0972444	0.0755	0.0169	0.0865	0.2057	0.0634	0.06	0.02	0.09	0.2	0.0722	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.8141	1.8141	NA	0.073372	0.172492	NA	0.138	NA	3.778928
1274	8	97318660	97318660	C	T	intronic	PTDSS1	NA	NA	NA	intronic	ENSG00000156471	NA	NA	NA	NA	NA	8q22.1	NA	NA	NA	NA	rs13439240	0.05	0.05	0.051	0.0535144	0.0795	0.001	0.0576	0.0794	0.0429	0.08	NA	0.05	0.06	0.0645	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.637649	1.637649	NA	0.077326	0.103268	NA	0.065	NA	3.778674
1274	1	110281941	110281941	G	A	intronic	GSTM3	NA	NA	NA	ncRNA_intronic	ENSG00000241720	NA	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	rs10735234	0.73	0.73	0.742	0.748403	0.5547	0.8601	0.6599	0.8835	0.7127	0.59	0.85	0.64	0.88	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.062516	NA	NA	NA	NA	NA	0.725	NA	3.7786333
1274	4	156273583	156273583	G	A	intronic	MAP9	NA	NA	NA	ncRNA_intronic	ENSG00000250910	NA	NA	NA	NA	NA	4q32.1	NA	NA	NA	NA	rs10034643	0.67	0.67	0.667	0.653754	0.5547	0.7946	0.5331	0.7844	0.5194	0.57	0.8	0.53	0.78	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.515313	NA	NA	NA	NA	NA	0.623	NA	3.7786333
1274	1	109482826	109482826	C	T	intronic	CLCC1	NA	NA	NA	intronic	ENSG00000121940,ENSG00000162641	NA	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	rs338479	0.21	0.21	0.198	0.222244	0.2217	0.0218	0.1715	0.4107	0.2106	0.23	0.02	0.2	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.077726	NA	NA	NA	NA	NA	0.217	NA	3.7783
1274	6	36943573	36943573	A	G	intronic	MTCH1	NA	NA	NA	intronic	ENSG00000137409	NA	NA	NA	NA	NA	6p21.2	NA	NA	NA	NA	rs2293386	0.21	0.21	0.155	0.236422	0.2217	0.1062	0.2968	0.2231	0.3609	0.23	0.1	0.32	0.25	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.819227	NA	NA	NA	NA	NA	0.188	NA	3.7783
1274	6	36943605	36943605	A	G	intronic	MTCH1	NA	NA	NA	intronic	ENSG00000137409	NA	NA	NA	NA	NA	6p21.2	NA	NA	NA	NA	rs2293387	0.21	0.21	0.167	0.236422	0.2217	0.1062	0.2968	0.2231	0.3609	0.23	0.1	0.32	0.25	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.691948	NA	NA	NA	NA	NA	0.188	NA	3.7783
1274	18	12274016	12274016	C	T	intronic	CIDEA	NA	NA	NA	intronic	ENSG00000176194	NA	NA	NA	NA	NA	18p11.21	NA	NA	NA	NA	rs45523438	0.16	0.16	0.137	0.168331	0.2217	0.1131	0.1859	0.0877	0.2669	0.22	0.13	0.2	0.09	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.30335	NA	NA	NA	NA	NA	0.116	NA	3.7783
1274	13	113739357	113739357	A	C	intronic	MCF2L	NA	NA	NA	intronic	ENSG00000126217	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs41286606	0.12	0.12	0.13	0.115216	0.0656	0.2649	0.0865	0.0893	0.0675	0.06	0.24	0.09	0.1	0.0856	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.265725	1.265725	NA	0.070581	0.083522	NA	0.058	NA	3.778219
1274	4	57219592	57219592	G	A	exonic	AASDH	NA	synonymous SNV	AASDH:NM_181806:exon9:c.C1554T:p.D518D	exonic	ENSG00000157426	NA	synonymous SNV	ENSG00000157426:ENST00000434343:exon6:c.C99T:p.D33D,ENSG00000157426:ENST00000513376:exon8:c.C1254T:p.D418D,ENSG00000157426:ENST00000602986:exon8:c.C1095T:p.D365D,ENSG00000157426:ENST00000205214:exon9:c.C1554T:p.D518D,ENSG00000157426:ENST00000451613:exon9:c.C1554T:p.D518D,ENSG00000157426:ENST00000502617:exon9:c.C1554T:p.D518D	NA	NA	4q12	NA	NA	NA	NA	rs6554348	0.62	0.62	0.597	0.645767	0.6322	0.5268	0.7406	0.6823	0.6656	0.63	0.51	0.71	0.68	0.638	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.431268	NA	NA	0.618605	0.647753	NA	0.623	NA	3.7778616
1274	5	96093138	96093138	C	T	intronic	CAST	NA	NA	NA	intronic	ENSG00000153113	NA	NA	NA	NA	NA	5q15	NA	NA	NA	NA	rs2290677	0.07	0.07	0.073	0.101238	0.0676	0.0238	0.0576	0.1793	0.1411	0.05	0.03	0.07	0.16	0.0812	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.134197	NA	NA	0.073488	0.157966	NA	0.101	NA	3.777712
1274	5	7927633	7927633	T	C	intergenic	MTRR,LOC729506	dist=26398;dist=405963	NA	NA	intergenic	ENSG00000251168,ENSG00000199773	dist=2122;dist=52626	NA	NA	Score=325;Name=lod=28	NA	5p15.31	NA	NA	NA	NA	rs2199340	0.49	0.49	0.466	0.507987	0.5557	0.503	0.4755	0.3638	0.682	0.55	0.48	0.52	0.38	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.880363	NA	NA	NA	NA	NA	0.471	NA	3.7776334
1274	2	165951896	165951896	A	G	intronic	SCN3A	NA	NA	NA	intronic	ENSG00000153253	NA	NA	NA	NA	NA	2q24.3	NA	NA	NA	NA	rs77002577	0.22	0.22	0.195	0.212859	0.2227	0.2659	0.1902	0.121	0.2883	0.22	0.28	0.23	0.13	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.363926	NA	NA	NA	NA	NA	0.152	NA	3.7773
1274	5	180047793	180047793	G	C	intronic	FLT4	NA	NA	NA	intronic	ENSG00000037280	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs34419336	0.14	0.14	0.148	0.135383	0.2227	0.0734	0.1599	0.0961	0.1452	0.21	0.06	0.2	0.09	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.625088	NA	NA	NA	NA	NA	0.217	NA	3.7773
1274	9	138675801	138675801	A	C	intronic	KCNT1	NA	NA	NA	intronic	ENSG00000107147	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs10776848	0.19	0.19	0.198	0.199081	0.2227	0.2351	0.1556	0.1589	0.2229	0.22	0.2	0.17	0.16	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.169485	NA	NA	NA	NA	NA	0.203	NA	3.7773
1274	12	25956208	25956208	T	C	intergenic	IFLTD1,MIR4302	dist=154712;dist=70745	NA	NA	ncRNA_exonic	ENSG00000255725	NA	NA	NA	NA	NA	12p12.1	NA	NA	NA	NA	rs11048253	NA	NA	0.14	0.162939	0.2227	0.0268	0.1859	0.2088	0.1636	NA	NA	NA	NA	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.954155	NA	NA	NA	NA	NA	0.196	NA	3.7773
1274	20	62550717	62550717	C	T	intronic	DNAJC5	NA	NA	NA	intronic	ENSG00000101152	NA	NA	NA	NA	NA	20q13.33	NA	NA	NA	NA	rs2427555	0.47	0.47	0.467	0.457268	0.2227	0.8016	0.4366	0.5182	0.2761	0.22	0.8	0.41	0.51	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.611732	NA	NA	NA	NA	NA	0.333	NA	3.7773
1274	19	374453	374453	T	C	intronic	THEG	NA	NA	NA	exonic	ENSG00000105549	NA	unknown	UNKNOWN	NA	NA	19p13.3	NA	NA	NA	NA	rs3815960	0.36	0.36	0.371	0.399561	0.2316	0.5496	0.196	0.5295	0.3865	0.21	0.54	0.21	0.51	0.2737	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.48679	NA	NA	0.217543	0.472991	NA	0.275	NA	3.777157
1274	5	96103110	96103110	A	G	intronic	CAST,ERAP1	NA	NA	NA	intronic	ENSG00000153113,ENSG00000164307	NA	NA	NA	NA	NA	5q15	NA	NA	NA	NA	rs3214019	0.07	0.07	0.073	0.101038	0.0676	0.0238	0.0576	0.1785	0.1411	0.05	0.03	0.07	0.15	0.0816	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.78083	NA	NA	0.073837	0.157966	NA	0.101	NA	3.776963
1274	20	31590530	31590530	T	G	intronic	SUN5	NA	NA	NA	intronic	ENSG00000167098	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs41305793	0.15	0.15	0.132	NA	NA	NA	NA	NA	NA	0.24	0.01	0.19	0.17	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.298564	NA	NA	0.22313	0.192197	NA	0.072	NA	3.77687
1274	11	78372536	78372536	G	A	exonic	TENM4	NA	synonymous SNV	TENM4:NM_001098816:exon33:c.C7509T:p.L2503L	exonic	ENSG00000149256	NA	synonymous SNV	ENSG00000149256:ENST00000278550:exon33:c.C7509T:p.L2503L	NA	NA	11q14.1	NA	NA	NA	NA	rs2277277	0.42	0.42	0.406	0.38119	0.672	0.1895	0.428	0.2685	0.3988	0.67	0.19	0.47	0.26	0.5518	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.65326	NA	NA	0.666027	0.309299	NA	0.442	NA	3.7768396
1274	4	42895715	42895715	A	G	intronic	GRXCR1	NA	NA	NA	intronic	ENSG00000215203	NA	NA	NA	NA	NA	4p13	NA	NA	NA	NA	rs41493449	0.13	0.13	0.134	0.123203	0.0716	0.1567	0.0648	0.2307	0.0378	0.07	0.14	0.06	0.24	0.0878	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.774689	NA	NA	0.063873	0.175529	NA	0.116	NA	3.776727
1274	1	237993724	237993724	C	T	intronic	RYR2	NA	NA	NA	intronic	ENSG00000198626	NA	NA	NA	NA	NA	1q43	NA	NA	NA	NA	rs2275692	0.11	0.11	0.1	0.0842652	0.2237	0.0546	0.0951	0.0136	0.0593	0.21	0.05	0.1	0.02	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.458672	NA	NA	NA	NA	NA	0.145	NA	3.7763
1274	1	240497598	240497598	T	C	intronic	FMN2	NA	NA	NA	intronic	ENSG00000155816	NA	NA	NA	NA	NA	1q43	NA	NA	NA	NA	rs12122068	0.23	0.23	0.203	0.205272	0.2237	0.251	0.3761	0.0673	0.2045	0.22	0.28	0.36	0.08	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.595556	2.595556	NA	NA	NA	NA	0.246	NA	3.7763
1274	2	27438710	27438710	G	A	intronic	ATRAID	NA	NA	NA	intronic	ENSG00000138085	NA	NA	NA	NA	NA	2p23.3	NA	NA	NA	NA	rs11126918	0.23	0.23	0.216	0.265775	0.2237	0.1508	0.3703	0.2708	0.3466	0.22	0.11	0.31	0.3	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.815067	NA	NA	NA	NA	NA	0.261	NA	3.7763
1274	2	73761881	73761881	G	A	intronic	ALMS1	NA	NA	NA	intronic	ENSG00000116127	NA	NA	NA	NA	NA	2p13.1	NA	NA	NA	NA	rs3738848	0.33	0.33	0.336	0.353435	0.2237	0.0089	0.3876	0.8442	0.1544	0.23	0.01	0.34	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.577623	NA	NA	NA	NA	NA	0.406	NA	3.7763
1274	3	46713764	46713764	G	A	intronic	ALS2CL	NA	NA	NA	intronic	ENSG00000178038	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs61277784	0.25	0.25	0.231	0.238219	0.2237	0.3165	0.2968	0.1513	0.2485	0.21	0.31	0.32	0.21	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.664962	NA	NA	NA	NA	NA	0.297	NA	3.7763
1274	3	64580169	64580169	C	T	intronic	ADAMTS9	NA	NA	NA	intronic	ENSG00000163638	NA	NA	NA	NA	NA	3p14.1	NA	NA	NA	NA	rs13320542	0.52	0.52	0.497	0.566294	0.2237	0.8105	0.5461	0.68	0.5276	0.22	0.79	0.49	0.69	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.715742	NA	NA	NA	NA	NA	0.536	NA	3.7763
1274	6	101337765	101337765	C	A	intergenic	ASCC3,GRIK2	dist=8541;dist=509096	NA	NA	ncRNA_exonic	ENSG00000270987	NA	NA	NA	NA	NA	6q16.3	NA	NA	NA	NA	rs601360	0.12	0.12	0.104	0.0914537	0.2237	0.001	0.1182	0.0522	0.0828	0.22	0.0017	0.14	0.07	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.743145	NA	NA	NA	NA	NA	0.116	NA	3.7763
1274	7	128137993	128137993	T	G	intronic	METTL2B	NA	NA	NA	intronic	ENSG00000165055	NA	NA	NA	NA	NA	7q32.1	NA	NA	NA	NA	rs10245559	0.18	0.18	0.16	0.158946	0.2237	0.0496	0.1902	0.1929	0.137	0.22	0.05	0.23	0.23	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.263461	NA	NA	NA	NA	ID=COSN168189;OCCURENCE=1(large_intestine)	0.196	NA	3.7763
1274	9	138675790	138675790	C	G	intronic	KCNT1	NA	NA	NA	intronic	ENSG00000107147	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs10776847	0.16	0.16	0.144	0.152756	0.2237	0.2242	0.134	0.0151	0.2055	0.22	0.2	0.15	0.03	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.445804	NA	NA	NA	NA	NA	0.174	NA	3.7763
1274	11	6245555	6245555	C	T	intronic	FAM160A2	NA	NA	NA	intronic	ENSG00000051009	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs325608	0.31	0.31	0.333	0.36222	0.2237	0.1786	0.2334	0.674	0.364	0.23	0.19	0.19	0.66	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.499501	NA	NA	NA	NA	ID=COSN163875;OCCURENCE=1(breast)	0.297	NA	3.7763
1274	13	37446711	37446711	G	T	intronic	SMAD9	NA	NA	NA	intronic	ENSG00000120693	NA	NA	NA	NA	NA	13q13.3	NA	NA	NA	NA	rs9576126	0.25	0.25	0.262	0.236422	0.2237	0.3353	0.219	0.1694	0.2505	0.21	0.35	0.25	0.2	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.631892	NA	NA	NA	NA	ID=COSN164468;OCCURENCE=1(breast)	0.297	NA	3.7763
1274	15	93567527	93567527	C	T	intronic	CHD2	NA	NA	NA	intronic	ENSG00000173575	NA	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs12905032	0.1	0.1	0.1	0.0872604	0.2237	0.0337	0.1484	0.0136	0.0583	0.2	0.02	0.15	0.02	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.112583	NA	NA	NA	NA	NA	NA	NA	3.7763
1274	15	93567528	93567528	C	T	intronic	CHD2	NA	NA	NA	intronic	ENSG00000173575	NA	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs12905033	0.11	0.11	0.102	0.0872604	0.2237	0.0337	0.1484	0.0136	0.0583	0.21	0.02	0.15	0.02	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.083577	NA	NA	NA	NA	NA	NA	NA	3.7763
1274	17	74007574	74007574	A	G	intronic	EVPL	NA	NA	NA	intronic	ENSG00000167880	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs2290252	0.17	0.17	0.165	0.174521	0.2237	0.0546	0.1499	0.2179	0.2065	0.2	0.07	0.17	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.040965	NA	NA	NA	NA	NA	0.312	NA	3.7763
1274	19	35978458	35978458	G	A	intronic	KRTDAP	NA	NA	NA	intronic	ENSG00000188508	NA	NA	NA	NA	NA	19q13.12	NA	NA	NA	NA	rs17638216	0.12	0.12	0.098	0.119209	0.2237	0.0109	0.1124	0.115	0.1339	0.21	0.01	0.12	0.13	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.205466	NA	NA	NA	NA	NA	0.13	NA	3.7763
1274	15	54529770	54529770	C	T	intronic	UNC13C	NA	NA	NA	intronic	ENSG00000137766	NA	NA	NA	NA	NA	15q21.3	NA	NA	NA	NA	rs16974342	0.06	0.06	0.059	0.0573083	0.0616	0.0635	0.0432	0.0734	0.0348	0.06	0.05	0.04	0.08	0.1095	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.679408	NA	NA	0.052734	0.062735	NA	0.065	NA	3.776166
1274	2	233199246	233199246	G	A	intronic	DIS3L2	NA	NA	NA	intronic	ENSG00000144535	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs1814893	0.12	0.12	0.103	0.123602	0.0696	0.0288	0.1254	0.2935	0.046	0.07	0.02	0.11	0.3	0.0916	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.298098	NA	NA	0.062695	0.256897	NA	0.022	NA	3.776105
1274	10	69684961	69684961	C	G	intronic	HERC4	NA	NA	NA	intronic	ENSG00000148634	NA	NA	NA	NA	NA	10q21.3	NA	NA	NA	NA	rs111617068	0.04	0.04	0.038	0.0255591	0.0885	0.001	0.036	0.003	0.0092	0.09	0.0017	0.05	0.0041	0.0601	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.632055	2.632055	NA	0.075535	0.015441	NA	0.014	NA	3.775865
1274	8	63659610	63659610	G	A	exonic	NKAIN3	NA	synonymous SNV	NKAIN3:NM_173688:exon4:c.G393A:p.T131T	exonic	ENSG00000185942	NA	synonymous SNV	ENSG00000185942:ENST00000328472:exon4:c.G393A:p.T131T,ENSG00000185942:ENST00000523211:exon4:c.G393A:p.T131T	NA	NA	8q12.3	NA	NA	NA	NA	rs1319275	0.44	0.44	0.433	0.429912	0.6441	0.3095	0.5836	0.1914	0.547	0.64	0.28	0.59	0.22	0.5742	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.197462	NA	NA	0.672622	0.281175	NA	0.486	NA	3.7757446
1274	1	168025538	168025538	T	C	intronic	DCAF6	NA	NA	NA	ncRNA_exonic	ENSG00000224837	NA	NA	NA	NA	NA	1q24.2	NA	NA	NA	NA	rs3977723	0.56	0.56	0.53	0.61881	0.5577	0.5268	0.6527	0.7821	0.5317	0.51	0.46	0.6	0.73	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.070237	NA	NA	NA	NA	NA	0.348	NA	3.7756333
1274	15	42703406	42703406	T	C	intronic	CAPN3	NA	NA	NA	ncRNA_intronic	ENSG00000258461	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs3115884	0.4	0.4	0.391	0.332468	0.5577	0.2619	0.3501	0.2186	0.3149	0.56	0.29	0.4	0.27	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.582183	NA	NA	NA	NA	NA	0.297	NA	3.7756333
1274	20	17389877	17389877	C	T	intronic	PCSK2	NA	NA	NA	intronic	ENSG00000125851	NA	NA	NA	NA	NA	20p12.1	NA	NA	NA	NA	rs2859875	0.09	0.09	0.095	0.100839	0.0686	NA	0.0865	0.2663	0.0245	0.05	NA	0.07	0.25	0.0777	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.246704	NA	NA	0.078372	0.240354	NA	0.196	NA	3.775328
1274	1	12942858	12942858	C	T	intronic	PRAMEF4	NA	NA	NA	intronic	ENSG00000243073	NA	NA	NA	NA	NA	1p36.21	NA	NA	NA	NA	rs4379684	0.23	0.23	0.13	0.252596	0.2247	0.1587	0.2089	0.4039	0.2045	0.21	0.17	0.23	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.412174	NA	NA	NA	NA	NA	NA	NA	3.7753
1274	2	20131987	20131987	T	C	intronic	WDR35	NA	NA	NA	intronic	ENSG00000118965	NA	NA	NA	NA	NA	2p24.1	NA	NA	NA	NA	rs4294960	0.25	0.25	0.269	0.229433	0.2247	0.2292	0.2262	0.2617	0.1933	0.23	0.27	0.22	0.28	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.886582	NA	NA	NA	NA	NA	0.145	NA	3.7753
1274	2	73649928	73649928	G	A	intronic	ALMS1	NA	NA	NA	intronic	ENSG00000116127	NA	NA	NA	NA	NA	2p13.1	NA	NA	NA	NA	rs1881245	0.32	0.32	0.335	0.335463	0.2247	0.0089	0.3804	0.7852	0.1462	0.23	0.01	0.33	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.147272	NA	NA	NA	NA	NA	0.348	NA	3.7753
1274	4	47708329	47708329	T	C	intronic	CORIN	NA	NA	NA	intronic	ENSG00000145244	NA	NA	NA	NA	NA	4p12	NA	NA	NA	NA	rs2001935	0.33	0.33	0.327	0.315695	0.2247	0.6032	0.2522	0.3124	0.1626	0.23	0.55	0.22	0.32	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.328764	NA	NA	NA	NA	NA	0.312	NA	3.7753
1274	4	70274502	70274502	G	A	intergenic	UGT2B28,UGT2B4	dist=113734;dist=71381	NA	NA	upstream	ENSG00000249956	NA	NA	NA	NA	NA	4q13.2	NA	NA	Name=4	NA	rs11249541	0.65	0.65	0.552	0.713658	0.7247	0.6052	0.7161	0.7375	0.7802	0.68	0.55	0.64	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.375218	NA	NA	NA	NA	NA	0.558	NA	3.7753
1274	16	849166	849166	C	A	intronic	GNG13	NA	NA	NA	intronic	ENSG00000127588	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs2272900	0.29	0.29	0.279	0.323682	0.2247	0.2937	0.2291	0.4365	0.3712	0.22	0.28	0.25	0.44	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.417176	NA	NA	NA	NA	NA	0.268	NA	3.7753
1274	17	63173756	63173756	A	G	intronic	RGS9	NA	NA	NA	intronic	ENSG00000108370	NA	NA	NA	NA	NA	17q24.1	NA	NA	NA	NA	rs9896245	0.41	0.41	0.407	0.472045	0.2247	0.3323	0.4654	0.8434	0.3732	0.22	0.34	0.42	0.8	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.70938	NA	NA	NA	NA	NA	0.529	NA	3.7753
1274	19	52381552	52381552	A	G	intronic	ZNF577	NA	NA	NA	intronic	ENSG00000161551	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs12151288	0.32	0.32	0.312	0.384984	0.2247	0.3016	0.2795	0.5356	0.5072	0.22	0.31	0.3	0.5	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.614158	NA	NA	NA	NA	NA	0.355	NA	3.7753
1274	8	22424244	22424244	T	C	intronic	SORBS3	NA	NA	NA	ncRNA_intronic	ENSG00000254230	NA	NA	NA	NA	NA	8p21.3	NA	NA	NA	NA	rs2272716	0.12	0.12	0.096	0.124601	0.2018	0.0327	0.1412	0.0643	0.2096	0.21	0.03	0.13	0.06	0.1742	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.347173	2.347173	NA	0.182209	0.084203	NA	0.109	NA	3.7751243
1275	10	116014827	116014827	G	T	intronic	VWA2	NA	NA	NA	intronic	ENSG00000165816	NA	NA	NA	NA	NA	10q25.3	NA	NA	NA	NA	rs12262953	0.08	0.08	0.079	0.0838658	0.0795	0.0575	0.0893	0.1483	0.0245	0.08	0.06	0.1	0.1	0.0736	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.973866	NA	NA	0.072093	0.134135	NA	0.065	NA	3.774807
1275	5	64881936	64881936	A	G	exonic	PPWD1	NA	synonymous SNV	PPWD1:NM_015342:exon10:c.A1725G:p.P575P	exonic	ENSG00000113593	NA	synonymous SNV	ENSG00000113593:ENST00000538977:exon9:c.A1257G:p.P419P,ENSG00000113593:ENST00000261308:exon10:c.A1725G:p.P575P,ENSG00000113593:ENST00000535264:exon11:c.A1635G:p.P545P	NA	NA	5q12.3	NA	NA	NA	NA	rs27141	0.56	0.56	0.543	0.578474	0.6203	0.4137	0.5115	0.6309	0.682	0.64	0.41	0.52	0.63	0.6223	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.15834	NA	NA	0.649302	0.622106	NA	0.739	NA	3.7747646
1275	7	2740015	2740015	T	G	UTR5	AMZ1	NM_133463:c.-71T>G	NA	NA	UTR5	ENSG00000174945	ENST00000312371:c.-71T>G,ENST00000407112:c.-71T>G	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs798473	0.62	0.62	0.613	0.622404	0.5586	0.752	0.4798	0.7171	0.5276	0.56	0.72	0.49	0.72	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.871609	NA	NA	NA	NA	NA	0.543	NA	3.7747334
1275	17	40817448	40817448	G	A	intronic	TUBG2	NA	NA	NA	intronic	ENSG00000037042	NA	NA	NA	NA	NA	17q21.2	NA	Name=CTCF	NA	NA	rs3817331	0.45	0.45	0.427	0.423722	0.4225	0.5337	0.4769	0.4024	0.3027	0.42	0.54	0.51	0.33	0.4027	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.898795	NA	NA	0.400349	0.408761	NA	0.283	NA	3.774451
1275	2	48738388	48738388	C	T	intronic	PPP1R21	NA	NA	NA	intronic	ENSG00000162869	NA	NA	NA	NA	NA	2p16.3	NA	NA	NA	NA	rs62135170	0.12	0.12	0.09	0.110823	0.2256	0.004	0.2378	0.0189	0.137	0.22	NA	0.26	0.02	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.197959	NA	NA	NA	NA	NA	0.116	NA	3.7744
1275	5	639089	639089	G	A	intronic	CEP72	NA	NA	NA	intronic	ENSG00000112877	NA	NA	NA	NA	NA	5p15.33	NA	NA	NA	NA	rs1709552	0.23	0.23	0.184	0.202276	0.2256	0.4683	0.232	0.0159	0.135	0.22	0.43	0.22	0.03	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.362136	NA	NA	NA	NA	NA	0.21	NA	3.7744
1275	12	103988117	103988117	C	A	intronic	STAB2	NA	NA	NA	intronic	ENSG00000136011	NA	NA	NA	NA	NA	12q23.3	NA	NA	NA	NA	rs703596	0.12	0.12	0.107	0.096246	0.2256	0.005	0.1873	0.0091	0.1104	0.25	0.0035	0.2	0.02	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.315738	3.315738	NA	NA	NA	NA	0.08	NA	3.7744
1275	12	130892163	130892163	G	A	intronic	RIMBP2	NA	NA	NA	intronic	ENSG00000060709	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs7310840	0.14	0.14	0.151	0.122204	0.2256	0.128	0.1427	0.0575	0.0828	0.22	0.09	0.14	0.09	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.741608	NA	NA	NA	NA	NA	0.159	NA	3.7744
1275	14	89148486	89148486	C	T	intronic	EML5	NA	NA	NA	intronic	ENSG00000165521	NA	NA	NA	NA	NA	14q31.3	NA	NA	NA	NA	rs17260380	0.28	0.28	0.26	0.257188	0.2256	0.3909	0.2305	0.1884	0.2638	0.23	0.4	0.24	0.24	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.156801	NA	NA	NA	NA	NA	0.304	NA	3.7744
1275	16	77389762	77389762	C	T	intronic	ADAMTS18	NA	NA	NA	intronic	ENSG00000140873	NA	NA	NA	NA	NA	16q23.1	NA	NA	NA	NA	rs8058333	0.41	0.41	0.387	0.410543	0.2256	0.5625	0.5159	0.4902	0.2618	0.21	0.58	0.47	0.47	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.530412	NA	NA	NA	NA	NA	0.326	NA	3.7744
1275	4	83626429	83626429	T	C	intronic	SCD5	NA	NA	NA	intronic	ENSG00000145284	NA	NA	NA	NA	NA	4q21.22	NA	NA	NA	NA	rs3821972	0.05	0.05	0.044	0.0603035	0.0845	0.003	0.0519	0.0484	0.1166	0.08	0.0017	0.06	0.05	0.0658	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.170778	2.170778	NA	0.075465	0.056287	NA	0.109	NA	3.774235
1275	11	107968520	107968520	T	A	intronic	CUL5	NA	NA	NA	intronic	ENSG00000166266	NA	NA	NA	NA	NA	11q22.3	NA	NA	NA	NA	rs73000527	0.05	0.05	0.048	0.0441294	0.0885	0.0109	0.0548	0.0136	0.0665	0.1	0.01	0.06	0.02	0.0628	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.681607	2.681607	NA	0.07457	0.018174	NA	0.051	NA	3.77413
1275	6	70951103	70951103	A	G	intronic	COL9A1	NA	NA	NA	ncRNA_intronic	ENSG00000253809	NA	NA	NA	NA	NA	6q13	NA	NA	NA	NA	rs13202029	0.1	0.1	0.109	0.0750799	0.1998	0.002	0.0994	0.0401	0.0521	0.21	0.0017	0.11	0.05	0.1513	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.788273	NA	NA	0.208372	0.065592	NA	0.181	NA	3.7738613
1275	1	150255587	150255587	T	C	UTR5	C1orf51	NM_144697:c.-91T>C	NA	NA	UTR5	ENSG00000159208	ENST00000290363:c.-91T>C	NA	NA	NA	NA	1q21.2	NA	NA	NA	NA	rs2147324	0.71	0.71	0.71	0.730631	0.5596	0.7788	0.7262	0.8858	0.6503	0.56	0.78	0.69	0.88	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.884164	NA	NA	NA	NA	NA	0.688	NA	3.7737334
1275	2	29136685	29136685	C	T	intronic	WDR43	NA	NA	NA	intronic	ENSG00000163811	NA	NA	NA	NA	NA	2p23.2	NA	NA	NA	NA	rs12472068	0.4	0.4	0.36	0.377796	0.2266	0.7907	0.4524	0.1974	0.2986	0.23	0.78	0.41	0.2	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.646943	NA	NA	NA	NA	NA	0.355	NA	3.7734
1275	4	69100396	69100396	G	A	intronic	TMPRSS11B	NA	NA	NA	intronic	ENSG00000185873	NA	NA	NA	NA	NA	4q13.2	NA	NA	NA	NA	rs13151732	0.18	0.18	0.152	0.172923	0.2266	0.0099	0.3429	0.2292	0.089	0.23	0.01	0.28	0.23	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.21438	NA	NA	NA	NA	NA	0.217	NA	3.7734
1275	7	44561901	44561901	A	C	intronic	NPC1L1	NA	NA	NA	intronic	ENSG00000015520	NA	NA	NA	NA	NA	7p13	NA	NA	NA	NA	rs217420	0.16	0.16	0.152	0.154553	0.2266	0.005	0.1383	0.2489	0.1186	0.21	0.01	0.18	0.25	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.721741	NA	NA	NA	NA	NA	0.167	NA	3.7734
1275	7	97860182	97860182	G	A	intronic	TECPR1	NA	NA	NA	intronic	ENSG00000205356	NA	NA	NA	NA	NA	7q21.3	NA	NA	NA	NA	rs2270601	0.27	0.27	0.271	0.296725	0.2266	0.4276	0.1931	0.1914	0.4499	0.22	0.45	0.2	0.21	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.293462	NA	NA	NA	NA	NA	0.312	NA	3.7734
1275	10	5689927	5689927	T	C	intronic	ASB13	NA	NA	NA	intronic	ENSG00000196372	NA	NA	NA	NA	NA	10p15.1	NA	NA	NA	NA	rs12264905	0.13	0.13	0.127	0.120607	0.2266	0.0079	0.1427	0.1074	0.1299	0.22	0.0017	0.16	0.12	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.453391	NA	NA	NA	NA	NA	0.181	NA	3.7734
1275	10	91465266	91465266	G	A	intronic	KIF20B	NA	NA	NA	intronic	ENSG00000138182	NA	NA	NA	NA	NA	10q23.31	NA	NA	NA	NA	rs72818759	0.13	0.13	0.129	0.122804	0.2266	0.001	0.183	0.0711	0.1687	0.23	0.0017	0.19	0.09	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.475136	NA	NA	NA	NA	NA	0.174	NA	3.7734
1275	11	3740574	3740574	C	T	intronic	NUP98	NA	NA	NA	intronic	ENSG00000110713	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs11029446	0.15	0.15	0.133	0.127796	0.2266	0.1101	0.1268	0.053	0.1462	0.23	0.1	0.17	0.07	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.895425	NA	NA	NA	NA	NA	0.225	NA	3.7734
1275	12	122623595	122623595	A	G	intronic	MLXIP	NA	NA	NA	intronic	ENSG00000175727	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs9668430	0.24	0.24	0.213	0.223842	0.2266	0.2728	0.1974	0.2095	0.2086	0.23	0.3	0.21	0.19	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.533848	NA	NA	NA	NA	NA	0.203	NA	3.7734
1275	14	51372333	51372333	A	G	intronic	PYGL	NA	NA	NA	intronic	ENSG00000100504	NA	NA	NA	NA	NA	14q22.1	NA	NA	NA	NA	rs1959527	0.36	0.36	0.343	0.353634	0.2266	0.5516	0.438	0.2663	0.3384	0.23	0.56	0.43	0.27	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.273611	1.273611	NA	NA	NA	NA	0.246	NA	3.7734
1275	20	37634704	37634704	T	C	intronic	DHX35	NA	NA	NA	intronic	ENSG00000101452	NA	NA	NA	NA	NA	20q12	NA	NA	NA	NA	rs3829696	0.17	0.17	0.15	0.161941	0.2266	0.131	0.1585	0.0946	0.2209	0.23	0.12	0.17	0.12	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.213425	NA	NA	NA	NA	NA	0.145	NA	3.7734
1275	10	95347381	95347381	C	A	UTR3	FFAR4	NM_181745:c.*15C>A,NM_001195755:c.*15C>A	NA	NA	UTR3	ENSG00000186188	ENST00000371483:c.*15C>A,ENST00000371481:c.*15C>A	NA	NA	NA	NA	10q23.33	NA	NA	NA	NA	rs41290218	0.16	0.16	0.155	0.20028	0.1899	0.0972	0.1556	0.2005	0.3487	0.18	0.1	0.17	0.18	0.1938	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.696607	NA	NA	0.176477	0.19882	NA	0.254	NA	3.7731564
1275	7	65220697	65220697	G	A	ncRNA_intronic	CCT6P1,LOC441242	NA	NA	NA	ncRNA_intronic	ENSG00000228409	NA	NA	NA	NA	NA	7q11.21	NA	NA	NA	NA	rs4718276	0.88	0.88	0.884	0.85643	0.8936	0.8552	0.7839	0.91	0.7986	0.91	0.83	0.82	0.94	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.6261	NA	NA	NA	NA	NA	0.797	NA	3.7730666
1275	7	20698602	20698602	T	C	intronic	ABCB5	NA	NA	NA	intronic	ENSG00000004846	NA	NA	NA	NA	NA	7p21.1	NA	NA	NA	NA	rs12700227	0.13	0.13	0.126	0.123203	0.1133	0.1597	0.1484	0.1074	0.0992	0.11	0.17	0.15	0.1	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.361467	NA	NA	0.113765	0.107659	NA	0.138	NA	3.772935
1275	9	19032907	19032907	A	G	UTR5	FAM154A	NM_153707:c.-1T>C	NA	NA	UTR5	ENSG00000155875	ENST00000380534:c.-1T>C,ENST00000542071:c.-104009T>C,ENST00000380530:c.-1T>C	NA	NA	NA	NA	9p22.1	NA	NA	NA	NA	rs17810415	0.16	0.16	0.143	0.157947	0.1849	0.0308	0.1902	0.2284	0.1431	0.19	0.02	0.2	0.24	0.1842	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.3308	NA	NA	0.191324	0.225148	NA	0.268	NA	3.7729094
1275	1	150310827	150310827	A	C	intronic	PRPF3	NA	NA	NA	intronic	ENSG00000117360	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs11806171	0.05	0.05	0.037	0.0433307	0.0686	0.001	0.036	0.0749	0.0235	0.08	0.0017	0.03	0.08	0.0735	0.085	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.10053	NA	NA	0.085233	0.075352	NA	0.051	NA	3.772667
1275	6	112041359	112041359	T	C	intronic	FYN	NA	NA	NA	intronic	ENSG00000010810	NA	NA	NA	NA	NA	6q21	NA	NA	NA	NA	rs706895	0.42	0.42	0.443	0.509585	0.2276	0.4494	0.3098	0.885	0.4959	0.22	0.4	0.31	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.429396	NA	NA	NA	NA	NA	0.543	NA	3.7724
1275	15	96984843	96984843	A	G	intergenic	NR2F2,SPATA8	dist=101351;dist=341836	NA	NA	ncRNA_exonic	ENSG00000250825	NA	NA	NA	NA	NA	15q26.2	NA	NA	NA	NA	rs4984437	0.42	0.42	0.415	0.458866	0.2276	0.4891	0.4582	0.7042	0.3344	0.22	0.48	0.42	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.798973	NA	NA	NA	NA	NA	0.399	NA	3.7724
1275	17	31324077	31324077	C	A	intronic	SPACA3	NA	NA	NA	intronic	ENSG00000141316	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs28904	0.23	0.23	0.206	0.215455	0.2276	0.3929	0.1542	0.0333	0.3098	0.24	0.42	0.14	0.04	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.010806	NA	NA	NA	NA	NA	0.123	NA	3.7724
1275	7	1517971	1517971	G	A	intronic	INTS1	NA	NA	NA	intronic	ENSG00000164880	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs4725131	0.07	0.07	0.054	0.0634984	0.0755	0.0317	0.2262	0.0159	0.0327	0.07	0.04	0.19	0.02	0.082	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.025335	NA	NA	0.070565	0.030367	NA	0.051	NA	3.771935
1275	4	25363471	25363471	A	G	intronic	ZCCHC4	NA	NA	NA	intronic	ENSG00000168228	NA	NA	NA	NA	NA	4p15.2	NA	NA	NA	NA	rs36038307	0.1	0.1	0.109	0.104832	0.0706	0.1071	0.1124	0.0915	0.1503	0.08	0.13	0.1	0.11	0.09	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.202989	NA	NA	0.067468	0.0933	NA	0.123	NA	3.771932
1275	12	64045672	64045672	C	T	intronic	DPY19L2	NA	NA	NA	ncRNA_exonic	ENSG00000257005	NA	NA	NA	NA	NA	12q14.2	NA	NA	NA	NA	rs4124773	0.64	0.64	0.608	0.612021	0.5616	0.6974	0.6499	0.5961	0.5706	0.57	0.76	0.64	0.63	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.084643	NA	NA	NA	NA	NA	0.428	NA	3.7717333
1275	18	7011490	7011490	A	G	intronic	LAMA1	NA	NA	NA	intronic	ENSG00000101680	NA	NA	NA	NA	NA	18p11.31	NA	NA	NA	NA	rs61695598	0.09	0.09	0.064	0.096246	0.0626	0.1052	0.111	0.1097	0.093	0.07	0.09	0.1	0.1	0.1028	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.008797	NA	NA	0.062951	0.093736	NA	0.159	NA	3.771649
1275	4	47605734	47605734	A	G	intronic	CORIN	NA	NA	NA	intronic	ENSG00000145244	NA	NA	NA	NA	NA	4p12	NA	NA	NA	NA	rs17572227	0.07	0.07	0.072	0.0636981	0.0746	0.004	0.036	0.1437	0.0256	0.08	0.01	0.05	0.15	0.0725	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.834143	NA	NA	0.081395	0.135227	NA	0.043	NA	3.771505
1275	2	237307967	237307967	G	A	intronic	IQCA1	NA	NA	NA	intronic	ENSG00000132321	NA	NA	NA	NA	NA	2q37.3	NA	NA	NA	NA	rs6719078	0.14	0.14	0.132	0.128195	0.2286	0.003	0.1671	0.152	0.0941	0.22	0.0017	0.18	0.14	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.342928	NA	NA	NA	NA	NA	0.116	NA	3.7714
1275	3	123049678	123049678	C	T	intronic	ADCY5	NA	NA	NA	intronic	ENSG00000173175	NA	NA	NA	NA	NA	3q21.1	NA	NA	NA	NA	rs4678009	0.3	0.3	0.284	0.297724	0.2286	0.5099	0.2522	0.211	0.2996	0.2	0.56	0.27	0.17	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.644664	NA	NA	NA	NA	NA	0.275	NA	3.7714
1275	5	33642163	33642163	G	A	intronic	ADAMTS12	NA	NA	NA	intronic	ENSG00000151388	NA	NA	NA	NA	NA	5p13.3	NA	NA	NA	NA	rs60892887	0.17	0.17	0.174	0.1252	0.2286	0.1954	0.17	0.0076	0.0736	0.23	0.22	0.17	0.01	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.459719	NA	NA	NA	NA	NA	0.159	NA	3.7714
1275	6	117249847	117249847	A	G	intronic	RFX6	NA	NA	NA	intronic	ENSG00000185002	NA	NA	NA	NA	NA	6q22.1	NA	NA	NA	NA	rs597688	0.3	0.3	0.288	0.339856	0.2286	0.4236	0.2896	0.292	0.4683	0.23	0.41	0.27	0.29	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.966989	NA	NA	NA	NA	NA	0.312	NA	3.7714
1275	7	38254140	38254140	C	T	intronic	STARD3NL	NA	NA	NA	intronic	ENSG00000010270	NA	NA	NA	NA	NA	7p14.1	NA	NA	NA	NA	rs3778893	0.2	0.2	0.22	0.198882	0.2286	0.1885	0.1614	0.205	0.1973	0.22	0.2	0.18	0.18	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.015893	NA	NA	NA	NA	NA	0.181	NA	3.7714
1275	13	59103501	59103501	A	G	intergenic	PCDH17,DIAPH3	dist=800436;dist=1136220	NA	NA	ncRNA_exonic	ENSG00000214335	NA	NA	NA	NA	NA	13q21.1	NA	NA	NA	NA	rs9591893	0.16	0.16	0.137	0.148163	0.2286	0.1756	0.2017	0.031	0.1575	0.24	0.16	0.19	0.03	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.137737	NA	NA	NA	NA	NA	0.116	NA	3.7714
1275	15	75595357	75595357	T	A	intergenic	GOLGA6D,COMMD4	dist=7209;dist=33017	NA	NA	upstream	ENSG00000260357	NA	NA	NA	Score=325;Name=lod=28	NA	15q24.2	NA	NA	NA	NA	rs35917376	0.61	0.61	0.525	0.584265	0.7286	0.6726	0.7651	0.2965	0.6053	0.75	0.62	0.72	0.3	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.803801	NA	NA	NA	NA	NA	0.681	NA	3.7714
1275	17	48562047	48562047	T	G	intronic	RSAD1	NA	NA	NA	intronic	ENSG00000136444	NA	NA	NA	NA	NA	17q21.33	NA	NA	NA	NA	rs72834177	0.24	0.24	0.256	0.272364	0.2286	0.0813	0.2637	0.4962	0.2178	0.22	0.08	0.26	0.46	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.143362	NA	NA	NA	NA	NA	0.37	NA	3.7714
1275	17	80993076	80993076	A	G	intronic	B3GNTL1	NA	NA	NA	intronic	ENSG00000175711	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs7405848	0.19	0.19	0.153	0.174521	0.2286	0.2093	0.17	0.1301	0.1462	0.23	0.22	0.18	0.12	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.598028	NA	NA	NA	NA	NA	0.239	NA	3.7714
1275	18	6985468	6985468	A	C	intronic	LAMA1	NA	NA	NA	intronic	ENSG00000101680	NA	NA	NA	NA	NA	18p11.31	NA	NA	NA	NA	rs11660907	0.16	0.16	0.149	0.135783	0.2286	0.1915	0.1383	0.0068	0.1554	0.24	0.17	0.17	0.01	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.121033	NA	NA	NA	NA	ID=COSN165571;OCCURENCE=1(breast)	0.203	NA	3.7714
1275	18	57677853	57677853	C	A	intergenic	PMAIP1,MC4R	dist=106315;dist=360711	NA	NA	ncRNA_exonic	ENSG00000256704,ENSG00000267462	NA	NA	NA	NA	NA	18q21.32	NA	NA	NA	NA	rs11152199	0.16	0.16	0.132	0.15615	0.2286	0.0238	0.2392	0.1142	0.2157	0.25	0.01	0.25	0.12	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.137326	NA	NA	NA	NA	NA	0.087	NA	3.7714
1275	20	4167234	4167234	C	T	intronic	SMOX	NA	NA	NA	intronic	ENSG00000088826	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs6139351	0.16	0.16	0.153	0.17472	0.2286	0.1042	0.1571	0.1785	0.1994	0.22	0.08	0.14	0.15	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.982771	NA	NA	NA	NA	NA	0.196	NA	3.7714
1275	20	31825797	31825797	G	A	intronic	BPIFA1	NA	NA	NA	intronic	ENSG00000198183	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs1407019	0.23	0.23	0.202	0.235823	0.2286	0.2113	0.1484	0.3298	0.2035	0.23	0.18	0.16	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.711442	NA	NA	NA	NA	NA	0.181	NA	3.7714
1275	20	31827439	31827439	A	G	intronic	BPIFA1	NA	NA	NA	intronic	ENSG00000198183	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs6141899	0.3	0.3	0.307	0.327077	0.2286	0.2113	0.1671	0.6657	0.2035	0.23	0.18	0.18	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.315395	NA	NA	NA	NA	NA	0.297	NA	3.7714
1275	20	31828254	31828254	T	C	intronic	BPIFA1	NA	NA	NA	intronic	ENSG00000198183	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs6059186	0.3	0.3	0.307	0.326877	0.2286	0.2113	0.1671	0.6649	0.2035	0.23	0.18	0.18	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.784507	NA	NA	NA	NA	NA	0.29	NA	3.7714
1275	2	233243645	233243645	C	A	intronic	ALPP	NA	NA	NA	intronic	ENSG00000163283	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs3748969	0.1	0.1	0.039	0.0846645	0.0726	0.2173	0.0519	0.025	0.0644	0.08	0.21	0.04	0.03	0.0801	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.058286	NA	NA	0.07593	0.038584	NA	0.145	NA	3.77137
1275	5	150564973	150564973	A	C	intronic	CCDC69	NA	NA	NA	intronic	ENSG00000198624	NA	NA	NA	NA	NA	5q33.1	NA	NA	NA	NA	rs2288818	0.1	0.1	0.085	0.111821	0.0716	0.123	0.0375	0.1543	0.137	0.08	0.12	0.04	0.16	0.0834	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.68072	NA	NA	0.073837	0.120291	ID=COSM149999;OCCURENCE=1(stomach)	0.152	NA	3.771163
1275	2	238253930	238253930	A	G	intronic	COL6A3	NA	NA	NA	intronic	ENSG00000163359	NA	NA	NA	NA	NA	2q37.3	NA	NA	NA	NA	rs2256485	0.1	0.1	0.091	0.107029	0.1302	0.0536	0.1744	0.0825	0.1237	0.13	0.05	0.16	0.09	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.445569	NA	NA	0.09868	0.093208	NA	0.087	NA	3.77112
1275	10	73581601	73581601	C	A	intronic	PSAP	NA	NA	NA	intronic	ENSG00000197746	NA	NA	NA	NA	NA	10q22.1	NA	NA	NA	NA	rs41307569	0.04	0.04	0.033	0.0443291	0.0736	0.006	0.0461	0.0272	0.0757	0.07	0.0035	0.06	0.03	0.0711	0.084	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.544211	NA	NA	0.084186	0.039946	NA	0.072	NA	3.771114
1275	7	23300049	23300049	A	C	intronic	GPNMB	NA	NA	NA	intronic	ENSG00000136235	NA	NA	NA	NA	NA	7p15.3	NA	NA	Name=7	NA	rs199351	0.5	0.5	0.529	0.53135	0.3837	0.3532	0.3934	0.9599	0.3855	0.37	0.33	0.42	0.94	0.4314	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.486615	NA	NA	0.413837	0.856559	NA	0.5	NA	3.771063
1275	19	14580635	14580635	G	A	intronic	PKN1	NA	NA	NA	intronic	ENSG00000123143	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs74889788	0.14	0.14	0.131	0.166733	0.0736	0.006	0.1167	0.469	0.0552	0.08	NA	0.14	0.39	0.093	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.090093	NA	NA	0.062515	0.395973	NA	0.174	NA	3.770885
1275	8	56535514	56535514	C	T	intergenic	XKR4,TMEM68	dist=96804;dist=115806	NA	NA	intergenic	ENSG00000270907,ENSG00000221589	dist=80901;dist=54278	NA	NA	NA	NA	8q12.1	NA	NA	Name=4	NA	rs6474006	0.53	0.53	0.523	0.485224	0.5626	0.6667	0.4741	0.2912	0.4888	0.56	0.67	0.52	0.3	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.233732	NA	NA	NA	NA	NA	0.413	NA	3.7707334
1275	11	105923564	105923564	C	T	UTR3	KBTBD3	NM_198439:c.*13G>A,NM_152433:c.*13G>A	NA	NA	UTR3	ENSG00000182359	ENST00000526793:c.*13G>A,ENST00000534815:c.*13G>A,ENST00000531837:c.*13G>A	NA	NA	NA	NA	11q22.3	NA	NA	NA	NA	rs3737347	0.2	0.2	0.188	0.199081	0.1918	0.3462	0.219	0.034	0.2638	0.19	0.35	0.22	0.02	0.1952	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.455217	NA	NA	0.175896	0.061164	NA	0.138	NA	3.7704374
1275	2	10126123	10126123	A	T	intronic	GRHL1	NA	NA	NA	intronic	ENSG00000134317	NA	NA	NA	NA	NA	2p25.1	NA	NA	NA	NA	rs1835424	0.26	0.26	0.19	0.234824	0.2296	0.2599	0.3905	0.208	0.1401	0.22	0.25	0.37	0.24	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.108601	NA	NA	NA	NA	NA	0.152	NA	3.7704
1275	2	47256618	47256618	A	G	intronic	TTC7A	NA	NA	NA	intronic	ENSG00000068724	NA	NA	NA	NA	NA	2p21	NA	NA	NA	NA	rs7575628	0.39	0.39	0.378	0.387181	0.2296	0.6438	0.3055	0.4773	0.2209	0.24	0.62	0.3	0.45	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.785777	NA	NA	NA	NA	NA	0.391	NA	3.7704
1275	5	639455	639455	C	G	intronic	CEP72	NA	NA	NA	intronic	ENSG00000112877	NA	NA	NA	NA	NA	5p15.33	NA	NA	NA	NA	rs1709551	0.3	0.3	0.26	0.278554	0.2296	0.4782	0.2954	0.261	0.135	0.23	0.44	0.28	0.26	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.874983	NA	NA	NA	NA	NA	0.297	NA	3.7704
1275	6	44145233	44145233	T	C	intronic	CAPN11	NA	NA	NA	intronic	ENSG00000137225	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs73429791	0.24	0.24	0.171	0.210463	0.2296	0.1071	0.2046	0.2579	0.2372	0.33	0.09	0.26	0.26	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.713269	NA	NA	NA	NA	NA	0.21	NA	3.7704
1275	11	102595413	102595413	C	T	intronic	MMP8	NA	NA	NA	intronic	ENSG00000118113	NA	NA	NA	NA	NA	11q22.2	NA	NA	NA	NA	rs11225394	0.15	0.15	0.133	0.128395	0.2296	0.1121	0.2291	0.0083	0.1319	0.25	0.11	0.2	0.01	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.966139	NA	NA	NA	NA	NA	0.058	NA	3.7704
1275	17	38976978	38976978	C	A	intronic	KRT10,TMEM99	NA	NA	NA	intronic	ENSG00000167920,ENSG00000186395	NA	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs6503559	0.14	0.14	0.107	0.132788	0.2296	0.0377	0.1816	0.0703	0.181	0.24	0.03	0.2	0.07	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.271132	NA	NA	NA	NA	NA	0.101	NA	3.7704
1275	18	61562371	61562371	T	C	intronic	SERPINB2	NA	NA	NA	intronic	ENSG00000197632	NA	NA	NA	NA	NA	18q21.33	NA	NA	NA	NA	rs7233370	0.31	0.31	0.272	0.326677	0.2296	0.499	0.3516	0.2837	0.2894	0.22	0.45	0.32	0.27	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.527734	NA	NA	NA	NA	NA	0.254	NA	3.7704
1275	18	61562391	61562391	A	C	intronic	SERPINB2	NA	NA	NA	intronic	ENSG00000197632	NA	NA	NA	NA	NA	18q21.33	NA	NA	NA	NA	rs7229383	0.31	0.31	0.278	0.326677	0.2296	0.499	0.3516	0.2837	0.2894	0.22	0.46	0.32	0.27	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.287477	NA	NA	NA	NA	NA	0.254	NA	3.7704
1275	18	61569543	61569543	T	A	intronic	SERPINB2	NA	NA	NA	intronic	ENSG00000197632,ENSG00000242550	NA	NA	NA	NA	NA	18q21.33	NA	NA	NA	NA	rs1863583	0.33	0.33	0.331	0.349042	0.2296	0.499	0.3559	0.3661	0.2894	0.22	0.46	0.33	0.35	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.393174	1.393174	NA	NA	NA	NA	0.283	NA	3.7704
1275	20	54945783	54945783	A	G	intronic	AURKA	NA	NA	NA	intronic	ENSG00000087586	NA	NA	NA	NA	NA	20q13.2	NA	NA	NA	NA	rs10485805	0.35	0.35	0.326	0.347444	0.2296	0.7391	0.4207	0.0961	0.3528	0.21	0.74	0.36	0.12	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.501754	NA	NA	NA	NA	NA	0.203	NA	3.7704
1275	10	90492356	90492356	A	G	intronic	LIPK	NA	NA	NA	intronic	ENSG00000204021	NA	NA	NA	NA	NA	10q23.31	NA	NA	NA	NA	rs11202833	0.09	0.09	0.095	0.0978435	0.0646	0.0288	0.0879	0.2239	0.0399	0.06	0.02	0.11	0.22	0.0868	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.759858	NA	NA	0.078267	0.220264	NA	0.116	NA	3.770333
1275	1	32694819	32694819	A	G	intronic	EIF3I	NA	NA	NA	intronic	ENSG00000084623	NA	NA	NA	NA	NA	1p35.1	NA	NA	NA	NA	rs72666792	0.13	0.13	0.106	0.171126	0.0567	0.2302	0.2118	0.1059	0.2873	0.06	0.22	0.12	0.12	0.1089	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.057562	4.057562	NA	0.064302	0.099183	NA	0.145	NA	3.770098
1275	1	175113578	175113578	T	C	exonic	TNN	NA	synonymous SNV	TNN:NM_022093:exon18:c.T3651C:p.N1217N	exonic	ENSG00000120332	NA	synonymous SNV	ENSG00000120332:ENST00000239462:exon18:c.T3651C:p.N1217N	Score=464;Name=lod=103	NA	1q25.1	NA	NA	NA	NA	rs10912897	0.98	0.98	0.983	0.986022	0.9602	0.997	0.9741	0.9962	0.9959	0.97	1	0.97	0.99	0.9749	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.034531	NA	NA	0.961512	0.990468	NA	0.993	NA	3.7700546
1275	19	48800338	48800338	A	G	exonic	CCDC114	NA	synonymous SNV	CCDC114:NM_144577:exon14:c.T1908C:p.S636S	exonic	ENSG00000105479	NA	synonymous SNV	ENSG00000105479:ENST00000315396:exon14:c.T1908C:p.S636S	NA	NA	19q13.33	NA	NA	NA	NA	rs7252988	0.51	0.51	0.494	0.464657	0.66	0.2619	0.4597	0.5068	0.4192	0.63	0.29	0.53	0.55	0.5703	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.359047	NA	NA	0.666395	0.536995	NA	0.616	NA	3.7699716
1275	10	95457992	95457992	A	G	intronic	FRA10AC1	NA	NA	NA	intronic	ENSG00000148690	NA	NA	NA	NA	NA	10q23.33	NA	NA	NA	NA	rs11187596	0.07	0.07	0.057	0.0571086	0.1153	0.0317	0.0865	0.0106	0.0654	0.11	0.02	0.11	0.01	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.098336	NA	NA	0.115022	0.020954	NA	0.022	NA	3.769678
1275	11	83691501	83691501	A	G	intronic	DLG2	NA	NA	NA	intronic	ENSG00000150672	NA	NA	NA	NA	NA	11q14.1	NA	NA	NA	NA	rs56209818	0.06	0.06	0.079	0.0864617	0.0835	0.003	0.0389	0.1354	0.1431	0.09	NA	0.05	0.12	0.0745	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.455032	1.455032	NA	0.072473	0.117757	NA	0.058	NA	3.769527
1275	19	9020185	9020185	T	C	intronic	MUC16	NA	NA	NA	intronic	ENSG00000181143	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs78342591	0.08	0.08	0.054	0.0788738	0.0736	0.1022	0.1095	0.0083	0.1339	0.08	0.11	0.12	0.01	0.0824	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.058214	NA	NA	0.074569	0.021592	NA	0.058	NA	3.769431
1275	5	56817699	56817699	C	T	intergenic	ACTBL2,PLK2	dist=39063;dist=932111	NA	NA	ncRNA_intronic	ENSG00000250961	NA	NA	NA	NA	NA	5q11.2	NA	NA	NA	NA	rs2408820	0.17	0.17	0.154	0.171326	0.2306	0.0099	0.2061	0.2587	0.1339	0.23	0.01	0.22	0.23	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.994944	NA	NA	NA	NA	NA	0.21	NA	3.7694
1275	5	180046839	180046839	G	A	intronic	FLT4	NA	NA	NA	intronic	ENSG00000037280	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs7707285	0.14	0.14	0.121	0.132188	0.2306	0.0744	0.1614	0.0726	0.1503	0.22	0.06	0.2	0.06	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.62858	NA	NA	NA	NA	NA	0.152	NA	3.7694
1275	13	110861651	110861651	G	A	intronic	COL4A1	NA	NA	NA	intronic	ENSG00000187498	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs61963269	NA	NA	NA	0.195088	0.2306	0.0526	0.304	0.2413	0.1656	NA	NA	NA	NA	NA	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.673895	NA	NA	NA	NA	NA	0.051	NA	3.7694
1275	15	43021628	43021628	C	T	intronic	CDAN1	NA	NA	NA	intronic	ENSG00000140326	NA	NA	NA	NA	NA	15q15.2	NA	NA	NA	NA	rs16957104	0.39	0.39	0.431	0.453474	0.2306	0.2361	0.1916	0.9539	0.4162	0.24	0.23	0.2	0.94	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.089179	NA	NA	NA	NA	NA	0.428	NA	3.7694
1275	19	53015742	53015742	C	G	UTR3	ZNF578	NM_001099694:c.*335C>G	NA	NA	upstream;downstream	ENSG00000269349;ENSG00000258405	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs329939	0.16	0.16	0.149	0.165535	0.2306	0.0437	0.2378	0.1558	0.1861	0.23	0.05	0.23	0.15	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.81994	NA	NA	NA	NA	NA	0.203	NA	3.7694
1275	2	10050947	10050947	T	C	exonic	TAF1B	NA	synonymous SNV	TAF1B:NM_005680:exon10:c.T1038C:p.A346A	exonic	ENSG00000115750	NA	synonymous SNV	ENSG00000115750:ENST00000263663:exon10:c.T1038C:p.A346A,ENSG00000115750:ENST00000396242:exon10:c.T273C:p.A91A	NA	NA	2p25.1	NA	NA	NA	NA	rs1054561	0.48	0.48	0.454	0.43131	0.6551	0.4514	0.536	0.1301	0.5133	0.64	0.48	0.57	0.15	0.5743	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.444341	1.444341	NA	0.668023	0.210622	NA	0.536	NA	3.7692436
1275	15	60797607	60797607	T	C	intronic	RORA	NA	NA	NA	ncRNA_intronic	ENSG00000245534	NA	NA	NA	NA	NA	15q22.2	NA	NA	NA	NA	rs7171309	0.58	0.58	0.538	0.59385	0.5646	0.8204	0.6484	0.2534	0.8119	0.56	0.84	0.64	0.24	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.525714	NA	NA	NA	NA	NA	0.391	NA	3.7687333
1275	17	39118249	39118249	G	A	intronic	KRT39	NA	NA	NA	ncRNA_intronic	ENSG00000234477	NA	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs2063333	0.67	0.67	0.699	0.705871	0.5646	0.5863	0.6816	0.9372	0.6789	0.57	0.58	0.65	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.380472	1.380472	NA	NA	NA	NA	0.732	NA	3.7687333
1275	11	67226097	67226097	C	T	intronic	CABP4	NA	NA	NA	intronic	ENSG00000175544	NA	NA	NA	NA	NA	11q13.2	NA	NA	NA	NA	rs72934713	0.05	0.05	0.043	0.0325479	0.0765	NA	0.049	0.0053	0.046	0.09	NA	0.07	0.01	0.0614	0.093	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.353472	NA	NA	0.093481	0.019773	NA	0.036	NA	3.768619
1275	17	3620138	3620138	A	G	intronic	ITGAE	NA	NA	NA	intronic	ENSG00000083457	NA	NA	NA	NA	NA	17p13.2	NA	Name=MafK_(ab50322)	NA	NA	rs2293881	0.57	0.57	NA	0.610024	0.6322	0.3433	0.4236	0.7912	0.7495	0.63	0.35	0.46	0.79	0.5992	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.470345	NA	NA	NA	NA	NA	0.609	NA	3.7686
1275	12	39719754	39719754	T	C	intronic	KIF21A	NA	NA	NA	intronic	ENSG00000139116	NA	NA	NA	NA	NA	12q12	NA	NA	NA	NA	rs76927060	0.11	0.11	0.117	0.110823	0.1203	0.131	0.0548	0.1082	0.1237	0.11	0.11	0.07	0.13	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.463804	NA	NA	0.111216	0.087428	NA	0.072	NA	3.768484
1275	3	141328918	141328918	T	G	intronic	RASA2	NA	NA	NA	intronic	ENSG00000155903	NA	NA	NA	NA	NA	3q23	NA	NA	NA	NA	rs295324	0.12	0.12	0.093	0.105831	0.0636	0.2133	0.2291	0.003	0.09	0.06	0.24	0.19	0.01	0.1018	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.391603	NA	NA	0.066163	0.015207	ID=COSM149483,COSM149484;OCCURENCE=1(stomach)	0.058	NA	3.768437
1275	7	131347009	131347009	T	C	intergenic	PODXL,PLXNA4	dist=105633;dist=461082	NA	NA	ncRNA_exonic	ENSG00000213261	NA	NA	NA	NA	NA	7q32.3	NA	NA	NA	NA	rs3885619	0.17	0.17	0.133	0.158546	0.2316	0.121	0.2695	0.0144	0.2382	0.24	0.13	0.28	0.03	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4296	NA	NA	NA	NA	NA	0.188	NA	3.7684
1275	12	128108934	128108934	G	A	intergenic	LOC440117,FLJ37505	dist=749698;dist=257228	NA	NA	ncRNA_intronic	ENSG00000257035	NA	NA	NA	NA	NA	12q24.32	NA	NA	NA	NA	rs10847418	0.23	0.23	0.212	0.18151	0.2316	0.2907	0.2925	0.0129	0.1667	0.25	0.33	0.31	0.01	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.490717	1.490717	NA	NA	NA	NA	0.159	NA	3.7684
1275	1	232629475	232629475	C	T	intronic	SIPA1L2	NA	NA	NA	intronic	ENSG00000116991	NA	NA	NA	NA	NA	1q42.2	NA	NA	NA	NA	rs3737839	0.23	0.23	0.212	0.251997	0.2316	0.1637	0.3963	0.2254	0.2975	0.22	0.16	0.37	0.22	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.705702	NA	NA	NA	NA	NA	0.333	NA	3.7684
1275	2	85626479	85626479	G	C	intronic	CAPG	NA	NA	NA	intronic	ENSG00000042493	NA	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs34063934	0.22	0.22	0.21	0.22484	0.2316	0.119	0.1427	0.3207	0.2556	0.24	0.13	0.14	0.34	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.344379	NA	NA	NA	NA	NA	0.29	NA	3.7684
1275	3	10345921	10345921	C	T	intronic	SEC13	NA	NA	NA	intronic	ENSG00000157020	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs40515	0.19	0.19	0.186	0.182708	0.2316	0.005	0.2176	0.2753	0.1656	0.22	NA	0.21	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.212947	NA	NA	NA	NA	NA	0.348	NA	3.7684
1275	21	42861332	42861332	C	T	intronic	TMPRSS2	NA	NA	NA	intronic	ENSG00000184012	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs429442	0.27	0.27	0.268	0.279553	0.2316	0.2946	0.2565	0.3328	0.2577	0.23	0.29	0.24	0.32	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.019205	NA	NA	NA	NA	NA	0.29	NA	3.7684
1275	16	57741612	57741612	G	C	intronic	CCDC135	NA	NA	NA	exonic	ENSG00000159625	NA	unknown	UNKNOWN	NA	NA	16q21	NA	NA	NA	NA	rs2122486	0.18	0.18	0.172	0.184904	0.2386	0.1548	0.1297	0.1483	0.2495	0.24	0.15	0.13	0.14	0.2642	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.301655	NA	NA	0.229264	0.154897	NA	0.13	NA	3.767936
1275	18	61468085	61468085	T	A	intronic	SERPINB7	NA	NA	NA	intronic	ENSG00000166396	NA	NA	NA	NA	NA	18q21.33	NA	NA	NA	NA	rs2658459	0.19	0.19	0.182	0.211661	0.0646	0.4117	0.1354	0.2428	0.1687	0.06	0.39	0.1	0.22	0.1132	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.376567	2.376567	NA	0.054535	0.215388	NA	0.217	NA	3.767665
1275	10	43318542	43318542	G	T	intronic	BMS1	NA	NA	NA	intronic	ENSG00000165733	NA	NA	NA	NA	NA	10q11.21	NA	NA	NA	NA	rs79899324	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2324	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.165833	NA	NA	NA	NA	NA	NA	NA	3.7676
1275	11	77389020	77389020	T	C	intronic	RSF1	NA	NA	NA	intronic	ENSG00000048649	NA	NA	NA	NA	NA	11q14.1	NA	NA	NA	NA	rs12286317	0.18	0.18	0.158	0.1877	0.2326	0.0942	0.1758	0.208	0.2188	0.22	0.1	0.2	0.18	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.55714	NA	NA	NA	NA	NA	0.246	NA	3.7674
1275	19	6906321	6906321	T	C	intronic	EMR1	NA	NA	NA	intronic	ENSG00000174837	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs447684	0.32	0.32	0.282	0.31869	0.2326	0.4554	0.389	0.2572	0.2996	0.23	0.49	0.35	0.22	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.034941	NA	NA	NA	NA	NA	0.283	NA	3.7674
1275	7	64864800	64864800	A	G	UTR3	ZNF92	NM_007139:c.*12A>G,NM_152626:c.*12A>G	NA	NA	UTR3	ENSG00000146757	ENST00000328747:c.*12A>G,ENST00000431504:c.*12A>G,ENST00000357512:c.*12A>G,ENST00000450302:c.*12A>G	NA	NA	NA	NA	7q11.21	NA	NA	NA	NA	rs4122883	0.31	0.31	0.323	0.335264	0.161	0.3155	0.4164	0.5356	0.2065	0.15	0.31	0.35	0.54	0.2379	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.406875	NA	NA	0.16721	0.455849	NA	0.239	NA	3.7672234
1275	3	170204206	170204206	T	A	intronic	SLC7A14	NA	NA	NA	intronic	ENSG00000013293,ENSG00000013297	NA	NA	NA	NA	NA	3q26.2	NA	NA	NA	NA	rs74330815	0.13	0.13	0.157	0.164137	0.0666	NA	0.0648	0.4463	0.1227	0.06	NA	0.05	0.45	0.0959	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.468601	NA	NA	0.070349	0.351112	NA	0.232	NA	3.767151
1275	14	94187832	94187832	C	T	exonic	PRIMA1	NA	synonymous SNV	PRIMA1:NM_178013:exon5:c.G420A:p.S140S	exonic	ENSG00000175785	NA	synonymous SNV	ENSG00000175785:ENST00000393143:exon4:c.G420A:p.S140S,ENSG00000175785:ENST00000393140:exon5:c.G420A:p.S140S	NA	NA	14q32.12	NA	NA	NA	NA	rs1887197	0.52	0.52	0.501	0.498802	0.6332	0.3413	0.6974	0.3812	0.5409	0.65	0.34	0.68	0.43	0.6032	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.387014	NA	NA	0.66314	0.425329	NA	0.558	NA	3.7671266
1275	1	32682962	32682962	C	A	intronic	TMEM234	NA	NA	NA	intronic	ENSG00000160055	NA	NA	NA	NA	NA	1p35.1	NA	NA	NA	NA	rs41311189	0.13	0.13	0.118	0.177915	0.0567	0.2302	0.2089	0.1331	0.2873	0.06	0.22	0.12	0.15	0.1113	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.244214	3.244214	NA	0.064884	0.126645	NA	0.152	NA	3.767116
1275	3	133560423	133560423	G	A	intronic	RAB6B	NA	NA	NA	intronic	ENSG00000154917	NA	NA	NA	NA	NA	3q22.1	NA	NA	NA	NA	rs41272335	0.08	0.08	0.083	0.0696885	0.0676	0.0218	0.0548	0.1551	0.0164	0.08	0.02	0.05	0.16	0.075	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.796001	NA	NA	0.090349	0.14503	NA	0.072	NA	3.767051
1275	10	92503476	92503476	C	G	intronic	HTR7	NA	NA	NA	intronic	ENSG00000148680	NA	NA	NA	NA	NA	10q23.31	NA	NA	NA	NA	rs55802807	0.04	0.04	0.036	0.0299521	0.0765	NA	0.0447	0.0038	0.0378	0.08	NA	0.05	0.0041	0.0646	0.092	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.99731	NA	NA	0.09186	0.018157	NA	0.036	NA	3.76704
1275	11	18631527	18631527	T	C	ncRNA_exonic	SPTY2D1-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000247595	NA	NA	NA	NA	NA	11p15.1	NA	NA	NA	NA	rs11024731	0.21	0.21	0.197	0.190495	0.33	0.1438	0.2176	0.1044	0.1922	0.32	0.13	0.24	0.12	0.2547	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.84686	NA	NA	0.314931	0.138245	NA	0.232	NA	3.7670356
1275	1	189222962	189222962	C	T	intergenic	NONE,FAM5C	dist=NONE;dist=843835	NA	NA	intergenic	ENSG00000226196,ENSG00000252553	dist=120539;dist=412317	NA	NA	NA	NA	1q31.1	NA	Name=FOXA1_(SC-101058),FOXA1_(C-20)	NA	NA	rs6700979	0.64	0.64	0.655	0.636981	0.5666	0.5387	0.6556	0.8238	0.545	0.58	0.59	0.6	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.669444	NA	NA	NA	NA	NA	0.645	NA	3.7667334
1275	7	149572842	149572842	G	C	intronic	ATP6V0E2	NA	NA	NA	ncRNA_intronic	ENSG00000204934	NA	NA	NA	NA	NA	7q36.1	NA	NA	NA	NA	rs10240203	0.52	0.52	0.538	0.488419	0.5666	0.3234	0.5072	0.6573	0.3364	0.56	0.35	0.54	0.67	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.724361	NA	NA	NA	NA	NA	0.551	NA	3.7667333
1275	19	37681098	37681098	G	A	intronic	ZNF585B	NA	NA	NA	UTR5	ENSG00000245680	ENST00000531805:c.-139C>T	NA	NA	NA	NA	19q13.12	NA	NA	NA	NA	rs28701616	0.16	0.16	0.158	0.152756	0.1272	0.0575	0.1182	0.3026	0.0992	0.12	0.07	0.15	0.36	0.1332	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.28153	NA	NA	0.139651	0.259873	NA	0.159	NA	3.7666157
1275	20	13053035	13053035	A	G	exonic	SPTLC3	NA	synonymous SNV	SPTLC3:NM_018327:exon3:c.A435G:p.S145S	exonic	ENSG00000172296	NA	synonymous SNV	ENSG00000172296:ENST00000378194:exon3:c.A435G:p.S145S,ENSG00000172296:ENST00000399002:exon3:c.A435G:p.S145S,ENSG00000172296:ENST00000450297:exon3:c.A354G:p.S118S	NA	NA	20p12.1	NA	NA	NA	NA	rs243888	0.66	0.66	0.678	0.653754	0.6491	0.6052	0.6542	0.7973	0.5143	0.64	0.55	0.67	0.81	0.6293	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.827794	NA	NA	0.621823	0.753406	NA	0.761	NA	3.7664436
1275	2	128772310	128772310	C	T	intronic	SAP130	NA	NA	NA	intronic	ENSG00000136715	NA	NA	NA	NA	NA	2q14.3	NA	NA	NA	NA	rs35312230	0.32	0.32	0.323	0.349042	0.2336	0.2887	0.2579	0.5575	0.3129	0.22	0.27	0.28	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.811572	NA	NA	NA	NA	NA	0.428	NA	3.7664
1275	3	190106332	190106332	T	A	intronic	CLDN16	NA	NA	NA	intronic	ENSG00000113946	NA	NA	NA	NA	NA	3q28	NA	NA	NA	NA	rs1491993	0.14	0.14	0.122	0.117212	0.2336	0.0208	0.1455	0.0681	0.1431	0.23	0.03	0.19	0.09	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.381393	NA	NA	NA	NA	NA	0.21	NA	3.7664
1275	9	29636540	29636540	T	C	intergenic	LINGO2,LOC401497	dist=423542;dist=752393	NA	NA	ncRNA_exonic	ENSG00000229834	NA	NA	NA	NA	NA	9p21.1	NA	NA	NA	NA	rs11794034	0.18	0.18	0.176	0.160743	0.2336	0.12	0.1571	0.1694	0.1186	0.24	0.13	0.17	0.18	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.025181	NA	NA	NA	NA	NA	0.167	NA	3.7664
1275	11	77602673	77602673	A	G	intronic	INTS4	NA	NA	NA	intronic	ENSG00000087884,ENSG00000149262	NA	NA	NA	NA	NA	11q14.1	NA	NA	NA	NA	rs670090	0.17	0.17	0.131	0.165335	0.2336	0.0933	0.1571	0.1362	0.2147	0.23	0.1	0.19	0.13	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.093084	NA	NA	NA	NA	NA	0.109	NA	3.7664
1275	17	16843171	16843171	A	G	intronic	TNFRSF13B	NA	NA	NA	intronic	ENSG00000240505	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs11652811	0.13	0.13	0.104	0.103235	0.2336	0.001	0.1974	0.0174	0.1237	0.23	NA	0.23	0.03	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.527665	NA	NA	NA	NA	NA	0.123	NA	3.7664
1275	14	88974417	88974417	T	C	intronic	PTPN21	NA	NA	NA	ncRNA_intronic	ENSG00000258983	NA	NA	NA	NA	NA	14q31.3	NA	NA	NA	NA	rs10143744	0.36	0.36	0.384	0.374601	0.2674	0.3889	0.2579	0.5234	0.3517	0.28	0.36	0.27	0.56	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.119262	NA	NA	0.299558	0.478324	NA	0.457	NA	3.7663753
1275	1	248343543	248343543	C	T	exonic	OR2M2	NA	synonymous SNV	OR2M2:NM_001004688:exon1:c.C256T:p.L86L	exonic	ENSG00000198601	NA	synonymous SNV	ENSG00000198601:ENST00000359682:exon1:c.C256T:p.L86L	NA	NA	1q44	NA	NA	NA	NA	rs9435919	0.55	0.55	0.502	0.578474	0.6382	0.4306	0.6052	0.6188	0.5961	0.62	0.4	0.59	0.6	0.6131	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.611246	NA	NA	0.649337	0.619156	NA	0.572	NA	3.7660296
1275	16	70514828	70514828	A	C	UTR3	COG4	NM_001195139:c.*85T>G,NM_015386:c.*85T>G	NA	NA	UTR3	ENSG00000103051	ENST00000564415:c.*2235T>G,ENST00000323786:c.*85T>G,ENST00000482252:c.*1588T>G,ENST00000565715:c.*85T>G	NA	NA	NA	NA	16q22.1	NA	NA	NA	NA	rs7919	0.46	0.46	0.439	0.41853	0.5676	0.4216	0.438	0.3737	0.3088	0.56	0.4	0.46	0.38	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.787218	NA	NA	NA	NA	NA	0.399	NA	3.7657334
1275	1	19441172	19441172	A	G	intronic	UBR4	NA	NA	NA	intronic	ENSG00000127481	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs2274004	0.18	0.18	0.151	0.16853	0.2346	0.2361	0.2017	0.0091	0.2229	0.23	0.26	0.19	0.01	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.625725	2.625725	NA	NA	NA	NA	0.109	NA	3.7654
1275	1	76878156	76878156	C	T	intronic	ST6GALNAC3	NA	NA	NA	intronic	ENSG00000184005	NA	NA	NA	NA	NA	1p31.1	NA	NA	NA	NA	rs17098942	0.23	0.23	0.21	0.251997	0.2346	0.3988	0.1499	0.0658	0.4427	0.23	0.4	0.17	0.08	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.341127	NA	NA	NA	NA	NA	0.319	NA	3.7654
1275	2	184024143	184024143	T	C	intronic	NUP35	NA	NA	NA	intronic	ENSG00000163002	NA	NA	NA	NA	NA	2q32.1	NA	NA	NA	NA	rs3748883	0.27	0.27	0.229	0.257588	0.2346	0.4633	0.2723	0.0923	0.2822	0.25	0.45	0.25	0.09	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.051563	NA	NA	NA	NA	ID=COSN166348;OCCURENCE=37(haematopoietic_and_lymphoid_tissue)	0.261	NA	3.7654
1275	3	111997510	111997510	T	A	intronic	SLC9C1	NA	NA	NA	intronic	ENSG00000172139	NA	NA	NA	NA	NA	3q13.2	NA	NA	NA	NA	rs12632408	0.3	0.3	0.248	0.311102	0.2346	0.2996	0.4006	0.3116	0.3374	0.24	0.3	0.38	0.32	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.062056	NA	NA	NA	NA	NA	0.275	NA	3.7654
1275	4	70212698	70212698	G	A	intergenic	UGT2B28,UGT2B4	dist=51930;dist=133185	NA	NA	ncRNA_exonic	ENSG00000250612	NA	NA	NA	NA	NA	4q13.2	NA	NA	NA	NA	rs116169166	0.19	0.19	0.172	0.229034	0.2346	0.2698	0.2277	0.1369	0.3067	0.19	0.26	0.19	0.1	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.237994	NA	NA	NA	NA	NA	0.109	NA	3.7654
1275	12	52711375	52711375	G	C	intronic	KRT83	NA	NA	NA	intronic	ENSG00000170523	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs2277384	0.34	0.34	0.348	0.341853	0.2346	0.4891	0.268	0.3949	0.2812	0.23	0.47	0.31	0.37	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.456412	NA	NA	NA	NA	NA	0.203	NA	3.7654
1275	16	21147999	21147999	A	G	intronic	DNAH3	NA	NA	NA	intronic	ENSG00000158486	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs730260	0.27	0.27	0.238	0.25	0.2346	0.2946	0.3646	0.1853	0.226	0.26	0.31	0.31	0.2	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.098687	NA	NA	NA	NA	NA	0.326	NA	3.7654
1275	3	124746347	124746347	T	C	exonic	HEG1	NA	synonymous SNV	HEG1:NM_020733:exon3:c.A615G:p.S205S	exonic	ENSG00000173706	NA	synonymous SNV	ENSG00000173706:ENST00000311127:exon3:c.A615G:p.S205S	NA	NA	3q21.2	NA	NA	NA	NA	rs4404487	0.73	0.73	0.726	0.76897	0.6223	0.8889	0.7248	0.7882	0.8016	0.64	0.87	0.67	0.77	0.6826	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.02938	NA	NA	0.596459	0.759069	NA	0.594	NA	3.7653076
1275	19	41269481	41269481	T	C	intronic	SNRPA	NA	NA	NA	intronic	ENSG00000077312	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs2249854	0.16	0.16	0.159	0.145767	0.0726	0.2073	0.0706	0.2602	0.0562	0.07	0.23	0.09	0.26	0.0941	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.007133	NA	NA	0.068023	0.214253	NA	0.13	NA	3.765277
1275	1	232002392	232002392	A	G	ncRNA_UTR3	DISC1	NA	NA	NA	UTR3	ENSG00000162946	ENST00000366636:c.*68A>G	NA	NA	NA	NA	1q42.2	NA	NA	NA	NA	rs3082	0.35	0.35	0.315	0.344649	0.3847	0.4226	0.3559	0.2057	0.4029	0.39	0.43	0.38	0.18	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.393375	NA	NA	0.350094	0.224711	NA	0.225	NA	3.765206
1275	19	33113295	33113295	G	A	intronic	ANKRD27	NA	NA	NA	intronic	ENSG00000105186	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs2302969	0.15	0.15	0.16	0.172724	0.0706	0.1032	0.0879	0.3533	0.1656	0.06	0.12	0.1	0.34	0.1018	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.447438	NA	NA	0.062442	0.308897	NA	0.246	NA	3.765158
1276	1	32158304	32158304	A	G	intronic	COL16A1	NA	NA	NA	intronic	ENSG00000084636	NA	NA	NA	NA	NA	1p35.2	NA	NA	NA	NA	rs2297675	0.15	0.15	0.109	0.213059	0.1123	0.1548	0.3602	0.1165	0.4029	0.11	0.17	0.27	0.09	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.407605	NA	NA	0.122879	0.132225	NA	0.167	NA	3.764821
1276	11	65427568	65427568	G	A	intronic	RELA	NA	NA	NA	intronic	ENSG00000173039	NA	NA	NA	NA	NA	11q13.1	NA	NA	NA	NA	rs732072	0.05	0.05	0.044	0.0623003	0.0795	0.0327	0.0461	0.0045	0.1646	0.08	0.03	0.06	0.01	0.0786	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.468392	NA	NA	0.077263	0.012267	NA	0.043	NA	3.764637
1276	3	191093384	191093384	A	G	intronic	CCDC50	NA	NA	NA	intronic	ENSG00000152492	NA	NA	NA	NA	NA	3q28	NA	NA	NA	NA	rs4677729	0.5	0.5	0.509	0.501597	0.4105	0.4702	0.4683	0.7231	0.3517	0.42	0.44	0.46	0.72	0.4344	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.758013	NA	NA	0.390475	0.664465	NA	0.464	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000041450.1;CLNDSDB=.;CLNDSDBID=.	3.764625
1276	13	95705453	95705453	T	C	intronic	ABCC4	NA	NA	NA	intronic	ENSG00000125257	NA	NA	NA	NA	NA	13q32.1	NA	NA	NA	NA	rs11568643	0.03	0.03	0.037	0.0315495	0.0815	0.001	0.0274	0.0098	0.044	0.08	NA	0.02	0.01	0.0632	0.091	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.306649	NA	NA	0.090698	0.022469	NA	0.043	NA	3.764602
1276	8	71495847	71495847	A	G	intronic	TRAM1	NA	NA	NA	intronic	ENSG00000067167	NA	NA	NA	NA	NA	8q13.3	NA	NA	NA	NA	rs61065292	0.05	0.05	0.045	0.0455272	0.0765	NA	0.0476	0.0673	0.0297	0.08	NA	0.04	0.05	0.0701	0.089	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.507974	2.507974	NA	0.088974	0.074251	NA	0.094	NA	3.764426
1276	1	26846195	26846195	C	T	intergenic	HMGN2,RPS6KA1	dist=43062;dist=10054	NA	NA	ncRNA_exonic	ENSG00000224129	NA	NA	NA	NA	NA	1p36.11	NA	NA	NA	NA	rs4970514	0.43	0.43	0.438	0.46226	0.2356	0.7123	0.3487	0.4826	0.4908	0.24	0.74	0.32	0.43	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.17047	NA	NA	NA	NA	NA	0.442	NA	3.7644
1276	1	45880669	45880669	C	T	intronic	TESK2	NA	NA	NA	intronic	ENSG00000070759	NA	NA	NA	NA	NA	1p34.1	NA	NA	NA	NA	rs12097497	0.27	0.27	0.253	0.281749	0.2356	0.3492	0.3429	0.2405	0.272	0.23	0.35	0.29	0.23	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.008796	NA	NA	NA	NA	NA	0.319	NA	3.7644
1276	10	100167605	100167605	G	A	intronic	PYROXD2	NA	NA	NA	intronic	ENSG00000119943	NA	NA	NA	NA	NA	10q24.2	NA	NA	NA	NA	rs7091709	0.41	0.41	0.383	0.465855	0.2356	0.4395	0.3876	0.6838	0.4908	0.22	0.46	0.37	0.67	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.564049	NA	NA	NA	NA	NA	0.116	NA	3.7644
1276	12	6061491	6061491	A	G	intronic	VWF	NA	NA	NA	intronic	ENSG00000110799	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs2286646	0.17	0.17	0.138	0.16254	0.2356	0.1845	0.1657	0.0537	0.2096	0.24	0.17	0.2	0.06	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.132123	NA	NA	NA	NA	NA	0.094	NA	3.7644
1276	13	113893625	113893625	G	A	intronic	CUL4A	NA	NA	NA	intronic	ENSG00000139842	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs7317558	0.32	0.32	0.268	0.333666	0.2356	0.5486	0.3905	0.121	0.4601	0.24	0.54	0.37	0.12	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.904787	NA	NA	NA	NA	NA	0.254	NA	3.7644
1276	19	53818473	53818473	C	T	intergenic	BIRC8,ZNF845	dist=23598;dist=18529	NA	NA	ncRNA_exonic	ENSG00000174677	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs7257010	0.28	0.28	0.239	0.284145	0.2356	0.3383	0.2363	0.3805	0.182	0.22	0.35	0.21	0.36	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.075953	NA	NA	NA	NA	NA	0.246	NA	3.7644
1276	19	53819233	53819233	T	C	intergenic	BIRC8,ZNF845	dist=24358;dist=17769	NA	NA	ncRNA_exonic	ENSG00000174677	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs11878380	NA	NA	0.24	0.285743	0.2356	0.3373	0.2363	0.3873	0.182	NA	NA	NA	NA	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.543754	NA	NA	NA	NA	NA	0.261	NA	3.7644
1276	19	54743057	54743057	G	A	intronic	LILRA6	NA	NA	NA	intronic	ENSG00000170889,ENSG00000204577,ENSG00000244482	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs73053480	0.22	0.22	0.222	0.225839	0.2356	0.0665	0.1758	0.388	0.1963	0.23	0.07	0.21	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.586961	1.586961	NA	NA	NA	NA	0.181	NA	3.7644
1276	19	55178035	55178035	A	G	intronic	LILRB4	NA	NA	NA	intronic	ENSG00000186818	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs1749317	0.22	0.22	0.21	0.238019	0.2356	0.245	0.3112	0.1868	0.2505	0.24	0.21	0.29	0.15	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.308339	NA	NA	NA	NA	NA	0.167	NA	3.7644
1276	3	132217957	132217957	T	G	intronic	DNAJC13	NA	NA	NA	intronic	ENSG00000138246	NA	NA	NA	NA	NA	3q22.1	NA	NA	NA	NA	rs78526588	0.04	0.04	0.043	0.0389377	0.0746	NA	0.0576	0.003	0.0777	0.08	NA	0.06	0.01	0.0732	0.088	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.326166	NA	NA	0.088023	0.019292	NA	0.036	NA	3.764177
1276	19	39191383	39191383	G	C	intronic	ACTN4	NA	NA	NA	intronic	ENSG00000130402	NA	NA	NA	NA	NA	19q13.2	NA	Name=Pol2	Name=3	NA	rs2112649	0.67	0.67	0.675	0.670727	0.7664	0.622	0.6138	0.5363	0.8446	0.77	0.64	0.66	0.55	0.7239	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.699261	NA	NA	0.745581	0.541988	NA	0.717	NA	3.764119
1276	7	143043377	143043377	C	G	intronic	CLCN1	NA	NA	NA	intronic	ENSG00000188037	NA	NA	NA	NA	NA	7q34	NA	Name=CTCF_(SC-5916),Rad21,CTCF	NA	NA	rs56680997	0.36	0.36	0.371	0.370008	0.4076	0.2768	0.2939	0.4251	0.407	0.4	0.26	0.34	0.45	0.4024	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.216479	NA	NA	0.42593	0.417158	NA	0.442	NA	3.76407
1276	1	92467741	92467741	A	C	intronic	BRDT	NA	NA	NA	intronic	ENSG00000137948	NA	NA	NA	NA	NA	1p22.1	NA	NA	NA	NA	rs72954738	0.05	0.05	0.031	0.0401358	0.0775	NA	0.0605	0.0469	0.0194	0.08	NA	0.09	0.03	0.0701	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.580959	NA	NA	0.088605	0.052882	NA	0.116	NA	3.763795
1276	7	42957446	42957446	A	T	intronic	PSMA2	NA	NA	NA	intronic	ENSG00000106588,ENSG00000256646	NA	NA	NA	NA	NA	7p14.1	NA	NA	NA	NA	rs55912267	0.06	0.06	0.029	0.0557109	0.0825	0.001	0.0922	0.0915	0.0102	0.07	NA	0.1	0.07	0.07	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.231372	NA	NA	0.083839	0.069438	NA	0.007	NA	3.763661
1276	8	71499109	71499109	T	C	intronic	TRAM1	NA	NA	NA	intronic	ENSG00000067167	NA	NA	NA	NA	NA	8q13.3	NA	NA	NA	NA	rs61412217	0.05	0.05	0.047	0.0455272	0.0765	NA	0.0476	0.0673	0.0297	0.08	NA	0.04	0.05	0.0706	0.089	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.523749	NA	NA	0.089419	0.075125	NA	0.094	NA	3.763481
1276	1	45887288	45887288	T	C	intronic	TESK2	NA	NA	NA	intronic	ENSG00000070759	NA	NA	NA	NA	NA	1p34.1	NA	NA	NA	NA	rs3790582	0.28	0.28	0.27	0.287939	0.2366	0.3492	0.3429	0.2632	0.272	0.23	0.35	0.29	0.25	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.486816	3.486816	NA	NA	NA	NA	0.333	NA	3.7634
1276	1	184868251	184868251	G	A	intronic	FAM129A	NA	NA	NA	intronic	ENSG00000135842	NA	NA	NA	NA	NA	1q25.3	NA	NA	NA	NA	rs3753575	0.14	0.14	0.149	0.15595	0.2366	0.1458	0.1326	0.0068	0.3016	0.23	0.14	0.13	0.01	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.747403	1.747403	NA	NA	NA	NA	0.188	NA	3.7634
1276	2	1677266	1677266	A	C	intronic	PXDN	NA	NA	NA	intronic	ENSG00000130508	NA	NA	NA	NA	NA	2p25.3	NA	NA	NA	NA	rs918953	0.28	0.28	0.283	0.314497	0.2366	0.3204	0.3026	0.3336	0.3712	0.25	0.32	0.28	0.3	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.673063	NA	NA	NA	NA	NA	0.326	NA	3.7634
1276	2	105924017	105924017	C	T	intronic	TGFBRAP1	NA	NA	NA	intronic	ENSG00000135966	NA	NA	NA	NA	NA	2q12.1	NA	NA	NA	NA	rs67600221	0.15	0.15	0.129	0.125	0.2366	0.0784	0.255	0.0098	0.1217	0.25	0.06	0.26	0.02	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.371548	NA	NA	NA	NA	NA	0.123	NA	3.7634
1276	4	123184827	123184827	G	A	intronic	KIAA1109	NA	NA	NA	intronic	ENSG00000138688	NA	NA	NA	NA	NA	4q27	NA	NA	NA	NA	rs45515895	0.14	0.14	0.11	0.122404	0.2366	0.124	0.1297	0.0068	0.1544	0.24	0.13	0.14	0.01	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.149461	NA	NA	NA	NA	NA	0.116	NA	3.7634
1276	6	42541802	42541802	G	C	intronic	UBR2	NA	NA	NA	intronic	ENSG00000024048	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs16895843	0.19	0.19	0.205	0.205471	0.2366	0.0883	0.1859	0.2519	0.2454	0.23	0.08	0.14	0.31	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.130077	NA	NA	NA	NA	ID=COSN167771;OCCURENCE=1(large_intestine)	0.21	NA	3.7634
1276	7	66660078	66660078	T	C	intronic	TYW1	NA	NA	NA	intronic	ENSG00000198874	NA	NA	NA	NA	NA	7q11.21	NA	NA	NA	NA	rs2844096	0.24	0.24	0.219	0.276757	0.2366	0.0734	0.232	0.4622	0.3088	0.21	0.08	0.24	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.444197	NA	NA	NA	NA	NA	0.203	NA	3.7634
1276	7	66660377	66660377	C	A	intronic	TYW1	NA	NA	NA	intronic	ENSG00000198874	NA	NA	NA	NA	NA	7q11.21	NA	NA	NA	NA	rs35290283	0.24	0.24	0.194	0.276757	0.2366	0.0734	0.232	0.4622	0.3088	0.21	0.08	0.25	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.450131	NA	NA	NA	NA	NA	0.138	NA	3.7634
1276	10	71175609	71175609	T	C	intronic	TACR2	NA	NA	NA	intronic	ENSG00000075073	NA	NA	NA	NA	NA	10q22.1	NA	NA	NA	NA	rs10998765	0.26	0.26	0.287	0.307109	0.2366	0.0853	0.1816	0.5809	0.3272	0.24	0.09	0.19	0.56	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.511291	NA	NA	NA	NA	NA	0.377	NA	3.7634
1276	19	53818502	53818502	A	G	intergenic	BIRC8,ZNF845	dist=23627;dist=18500	NA	NA	ncRNA_exonic	ENSG00000174677	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs2865265	0.27	0.27	0.184	0.285942	0.2366	0.3383	0.2363	0.3865	0.182	0.21	0.34	0.2	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.24433	NA	NA	NA	NA	NA	0.239	NA	3.7634
1276	20	13134470	13134470	T	C	intronic	SPTLC3	NA	NA	NA	intronic	ENSG00000172296	NA	NA	NA	NA	NA	20p12.1	NA	NA	NA	NA	rs2073304	0.27	0.27	0.271	0.310903	0.2366	0.3919	0.2709	0.1959	0.4877	0.25	0.38	0.26	0.2	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.203584	NA	NA	NA	NA	NA	0.297	NA	3.7634
1276	9	116131869	116131869	G	A	intronic	BSPRY	NA	NA	NA	intronic	ENSG00000119411	NA	NA	NA	NA	NA	9q32	NA	NA	NA	NA	rs10115141	0.07	0.07	0.075	0.0716853	0.0795	0.001	0.0735	0.1437	0.0378	0.08	0.0017	0.07	0.13	0.0789	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.087493	NA	NA	0.07884	0.144824	NA	0.014	NA	3.76276
1276	15	34094201	34094201	C	T	intronic	RYR3	NA	NA	NA	intronic	ENSG00000198838	NA	NA	NA	NA	NA	15q14	NA	NA	Name=21	NA	rs2115747	0.35	0.35	0.314	0.362021	0.4026	0.3651	0.2695	0.2587	0.5225	0.4	0.4	0.32	0.21	0.4212	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.049773	3.049773	NA	0.413785	0.288907	NA	0.283	NA	3.762415
1276	1	111990265	111990265	T	C	intronic	WDR77	NA	NA	NA	intronic	ENSG00000116455	NA	NA	NA	NA	NA	1p13.2	NA	NA	NA	NA	rs2298185	0.15	0.15	0.159	0.147564	0.2376	0.1359	0.1268	0.0522	0.2106	0.23	0.13	0.16	0.05	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.244251	1.244251	NA	NA	NA	NA	0.167	NA	3.7624
1276	3	111921010	111921010	A	G	intronic	SLC9C1	NA	NA	NA	intronic	ENSG00000172139	NA	NA	NA	NA	NA	3q13.2	NA	NA	NA	NA	rs9821935	0.32	0.32	0.27	0.335663	0.2376	0.3393	0.4035	0.3699	0.3384	0.24	0.32	0.38	0.37	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.091209	NA	NA	NA	NA	NA	0.304	NA	3.7624
1276	4	146770400	146770400	T	A	intronic	ZNF827	NA	NA	NA	intronic	ENSG00000151612	NA	NA	NA	NA	NA	4q31.21	NA	NA	NA	NA	rs28497499	0.43	0.43	0.148	0.420927	0.2376	0.8085	0.4971	0.18	0.4816	0.25	0.76	0.44	0.34	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.819224	NA	NA	NA	NA	NA	0.08	NA	3.7624
1276	7	83592357	83592357	G	A	intronic	SEMA3A	NA	NA	NA	intronic	ENSG00000075213	NA	NA	NA	NA	NA	7q21.11	NA	NA	NA	NA	rs10248226	0.12	0.12	0.098	0.102636	0.2376	0.0228	0.1499	0.0779	0.046	0.21	0.02	0.18	0.06	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.784	NA	NA	NA	NA	NA	0.116	NA	3.7624
1276	8	26868132	26868132	T	C	intergenic	ADRA1A,STMN4	dist=145210;dist=225682	NA	NA	downstream	ENSG00000215288	NA	NA	NA	Score=610;Name=lod=401	NA	8p21.2	NA	NA	NA	NA	rs7822824	0.67	0.67	0.65	0.642372	0.7376	0.5645	0.7795	0.5454	0.6585	0.74	0.6	0.76	0.58	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.032721	NA	NA	NA	NA	NA	0.486	NA	3.7624
1276	9	139697061	139697061	C	T	intronic	KIAA1984	NA	NA	NA	intronic	ENSG00000213213	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs2784100	0.13	0.13	0.117	0.132188	0.2376	0.0099	0.2406	0.0582	0.1728	0.23	0.0035	0.22	0.05	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.59397	NA	NA	NA	NA	NA	0.167	NA	3.7624
1276	15	85448992	85448992	G	T	intronic	SLC28A1	NA	NA	NA	intronic	ENSG00000156222	NA	NA	NA	NA	NA	15q25.3	NA	NA	NA	NA	rs67047009	0.3	0.3	0.268	0.361422	0.2376	0.3075	0.379	0.3782	0.5092	0.24	0.28	0.36	0.38	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.381391	NA	NA	NA	NA	NA	0.391	NA	3.7624
1276	16	88245	88245	C	T	intergenic	DDX11L10,POLR3K	dist=24155;dist=8734	NA	NA	ncRNA_exonic	ENSG00000226942	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs73493038	0.18	0.18	0.181	0.191094	0.2376	0.0268	0.2233	0.292	0.1534	0.23	0.02	0.22	0.27	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.69879	NA	NA	NA	NA	NA	0.138	NA	3.7624
1276	5	1057615	1057615	A	G	exonic	SLC12A7	NA	synonymous SNV	SLC12A7:NM_006598:exon22:c.T2997C:p.S999S	exonic	ENSG00000113504	NA	synonymous SNV	ENSG00000113504:ENST00000264930:exon22:c.T2997C:p.S999S	NA	NA	5p15.33	NA	NA	NA	NA	rs2241606	0.52	0.52	0.496	0.493011	0.6372	0.4772	0.6282	0.2352	0.6135	0.66	0.5	0.64	0.26	0.6137	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.63435	NA	NA	0.653372	0.30345	NA	0.5	NA	3.7623946
1276	19	46313825	46313825	A	T	intronic	RSPH6A	NA	NA	NA	intronic	ENSG00000104941	NA	NA	NA	NA	NA	19q13.32	NA	Name=CTCF,CEBPB,GR	Name=37	NA	rs10407137	0.79	0.79	0.775	0.785343	0.7296	0.8204	0.7147	0.879	0.7301	0.74	0.82	0.76	0.86	0.7539	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.605107	NA	NA	0.754302	0.85429	NA	0.826	NA	3.762198
1276	11	71507311	71507311	T	A	ncRNA_intronic	ALG1L9P	NA	NA	NA	ncRNA_UTR3	ENSG00000158483	NA	NA	NA	NA	NA	11q13.4	NA	NA	NA	NA	rs4522196	0.35	0.35	0.249	0.389776	0.4682	0.3294	0.3487	0.2655	0.5685	0.45	0.3	0.36	0.24	0.4363	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.329489	NA	NA	NA	NA	NA	0.022	NA	3.7621666
1276	11	134217210	134217210	C	T	intronic	GLB1L2	NA	NA	NA	intronic	ENSG00000149328	NA	NA	NA	NA	NA	11q25	NA	NA	NA	NA	rs10894800	0.13	0.13	0.13	0.15595	0.0646	0.3075	0.062	0.1157	0.2147	0.07	0.28	0.05	0.12	0.1038	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.494274	NA	NA	0.069467	0.101772	NA	0.101	NA	3.762133
1276	3	195968643	195968643	G	A	intronic	PCYT1A	NA	NA	NA	UTR3	ENSG00000161217	ENST00000430755:c.*80C>T	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs1045075	0.43	0.43	0.392	0.395966	0.4046	0.6935	0.4452	0.1044	0.4397	0.41	0.71	0.45	0.12	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.327306	NA	NA	NA	NA	NA	0.29	NA	3.7620667
1276	1	169528384	169528384	G	A	intronic	F5	NA	NA	NA	intronic	ENSG00000198734	NA	NA	NA	NA	NA	1q24.2	NA	NA	NA	NA	rs6023	0.04	0.04	0.039	0.0323482	0.0895	0.0119	0.036	0.0038	0.0307	0.08	0.01	0.06	0.0041	0.0582	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.800741	NA	NA	0.090349	0.017476	NA	0.007	NA	3.761951
1276	20	257733	257733	A	G	exonic	C20orf96	NA	synonymous SNV	C20orf96:NM_080571:exon8:c.T774C:p.S258S,C20orf96:NM_153269:exon8:c.T777C:p.S259S	exonic	ENSG00000196476	NA	synonymous SNV	ENSG00000196476:ENST00000382369:exon6:c.T672C:p.S224S,ENSG00000196476:ENST00000400269:exon6:c.T603C:p.S201S,ENSG00000196476:ENST00000360321:exon8:c.T777C:p.S259S	NA	NA	20p13	NA	NA	NA	NA	rs2277781	0.67	0.67	0.685	0.647165	0.6431	0.6935	0.5086	0.7587	0.5511	0.66	0.7	0.52	0.75	0.6197	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.080483	NA	NA	0.641977	0.741716	NA	0.667	NA	3.7618896
1276	1	59160885	59160885	A	G	intronic	MYSM1	NA	NA	NA	intronic	ENSG00000162601	NA	NA	NA	Score=313;Name=lod=25	NA	1p32.1	NA	NA	NA	NA	rs2064374	0.39	0.39	0.39	0.368211	0.4125	0.372	0.3357	0.3411	0.3783	0.42	0.39	0.34	0.39	0.4058	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.705914	NA	NA	0.420034	0.380321	NA	0.406	NA	3.761666
1276	1	1896223	1896223	C	T	intronic	KIAA1751	NA	NA	NA	intronic	ENSG00000142609	NA	NA	NA	NA	NA	1p36.33	NA	NA	NA	NA	rs13303202	0.22	0.22	0.19	0.189696	0.2386	0.2817	0.196	0.1301	0.1207	0.24	0.3	0.21	0.12	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.737565	NA	NA	NA	NA	NA	0.254	NA	3.7614
1276	1	1897753	1897753	C	G	intronic	KIAA1751	NA	NA	NA	intronic	ENSG00000142609	NA	NA	NA	NA	NA	1p36.33	NA	NA	NA	NA	rs4648600	0.22	0.22	0.205	0.187899	0.2386	0.2768	0.196	0.1271	0.1207	0.24	0.3	0.21	0.11	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.645601	NA	NA	NA	NA	NA	0.254	NA	3.7614
1276	9	2058133	2058133	T	C	intronic	SMARCA2	NA	NA	NA	intronic	ENSG00000080503	NA	NA	NA	NA	NA	9p24.3	NA	NA	NA	NA	rs6475447	0.4	0.4	0.415	0.416134	0.2386	0.3462	0.4395	0.7352	0.2229	0.24	0.34	0.41	0.73	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.214009	NA	NA	NA	NA	NA	0.457	NA	3.7614
1276	12	53451952	53451952	C	T	intronic	TENC1	NA	NA	NA	intronic	ENSG00000111077	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs2280446	0.34	0.34	0.323	0.360423	0.2386	0.4385	0.379	0.4228	0.3078	0.24	0.42	0.35	0.41	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.301845	NA	NA	NA	NA	NA	0.304	NA	3.7614
1276	18	57677294	57677294	A	G	intergenic	PMAIP1,MC4R	dist=105756;dist=361270	NA	NA	ncRNA_exonic	ENSG00000256704	NA	NA	NA	NA	NA	18q21.32	NA	NA	NA	NA	rs2000746	0.18	0.18	0.152	0.192093	0.2386	0.0327	0.2536	0.1876	0.271	0.26	0.01	0.27	0.18	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.055244	NA	NA	NA	NA	NA	0.13	NA	3.7614
1276	3	149700519	149700519	T	C	intergenic	LOC646903,TSC22D2	dist=9490;dist=426269	NA	NA	ncRNA_exonic	ENSG00000224831	NA	NA	NA	Score=395;Name=lod=54	NA	3q25.1	NA	NA	NA	NA	rs7630407	0.37	0.37	0.311	0.354433	0.4245	0.5873	0.3559	0.0772	0.4162	0.42	0.59	0.36	0.06	0.4062	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.079079	NA	NA	0.40814	0.13754	NA	0.355	NA	3.76116
1276	1	200971528	200971528	G	T	intronic	KIF21B	NA	NA	NA	intronic	ENSG00000116852	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs41269929	0.16	0.16	NA	0.175919	0.1024	0.1022	0.085	0.4236	0.0573	0.1	0.1	0.09	0.38	0.1366	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.503648	NA	NA	NA	NA	NA	0.152	NA	3.761
1276	19	312179	312179	A	G	intronic	MIER2	NA	NA	NA	intronic	ENSG00000105556	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs57360893	0.16	0.16	0.127	0.169329	0.1272	0.0278	0.2161	0.3623	0.0644	0.13	0.04	0.2	0.32	0.0017	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.773518	NA	NA	0.110258	0.333863	NA	0.087	NA	3.760842
1276	4	7533234	7533234	C	T	intronic	SORCS2	NA	NA	NA	intronic	ENSG00000184985	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs10007474	0.08	0.08	0.07	0.0802716	0.0716	0.0139	0.0893	0.1467	0.0613	0.07	0.01	0.11	0.15	0.0855	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.686724	NA	NA	0.082063	0.144466	NA	0.029	NA	3.760837
1276	10	13782110	13782110	A	C	intronic	FRMD4A	NA	NA	NA	ncRNA_intronic	ENSG00000234091	NA	NA	NA	NA	NA	10p13	NA	NA	NA	NA	rs11258567	0.53	0.53	0.504	0.519569	0.5726	0.6905	0.5865	0.2405	0.6186	0.56	0.67	0.56	0.29	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.334915	NA	NA	NA	NA	NA	0.37	NA	3.7607333
1276	1	241964559	241964559	C	T	UTR3	WDR64	NM_144625:c.*42C>T	NA	NA	UTR3	ENSG00000162843	ENST00000437684:c.*42C>T,ENST00000366552:c.*42C>T,ENST00000468967:c.*1570C>T,ENST00000414635:c.*42C>T,ENST00000425826:c.*42C>T	NA	NA	NA	NA	1q43	NA	Name=GATA3_(SC-268)	NA	NA	rs4658661	0.44	0.44	0.442	0.38139	0.506	0.4077	0.3934	0.1899	0.4765	0.58	0.48	0.44	0.18	0.4743	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.294254	NA	NA	0.592442	0.228098	NA	0.355	NA	3.7605914
1276	1	157522016	157522016	G	A	intronic	FCRL5	NA	NA	NA	intronic	ENSG00000143297	NA	NA	NA	NA	NA	1q23.1	NA	NA	NA	NA	rs7552348	0.22	0.22	0.213	0.209665	0.2396	0.0794	0.1729	0.3328	0.1728	0.25	0.08	0.21	0.36	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.445052	NA	NA	NA	NA	NA	0.246	NA	3.7604
1276	8	642357	642357	A	G	intronic	ERICH1	NA	NA	NA	intronic	ENSG00000104714	NA	NA	NA	NA	NA	8p23.3	NA	NA	NA	NA	rs1703896	0.34	0.34	0.344	0.324281	0.2396	0.3998	0.3833	0.3646	0.2372	0.23	0.45	0.37	0.36	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.96399	NA	NA	NA	NA	NA	0.29	NA	3.7604
1276	12	131602811	131602811	C	T	intronic	GPR133	NA	NA	NA	intronic	ENSG00000111452	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs7961434	0.38	0.38	0.334	0.373602	0.2396	0.7371	0.4352	0.1362	0.4141	0.24	0.75	0.37	0.15	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.881188	NA	NA	NA	NA	NA	0.261	NA	3.7604
1276	19	6901715	6901715	A	G	intronic	EMR1	NA	NA	NA	intronic	ENSG00000174837	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs897739	0.42	0.42	0.431	0.433307	0.2396	0.4563	0.4193	0.6664	0.3037	0.24	0.5	0.38	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.175494	NA	NA	NA	NA	NA	0.428	NA	3.7604
1276	19	10665695	10665695	C	T	intronic	KRI1	NA	NA	NA	intronic	ENSG00000129347	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs10413128	0.17	0.17	0.156	0.180911	0.2396	0.1111	0.1484	0.146	0.2628	0.23	0.09	0.19	0.17	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.594484	NA	NA	NA	NA	NA	0.268	NA	3.7604
1276	19	45858245	45858245	C	T	intronic	ERCC2	NA	NA	NA	intronic	ENSG00000104884	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs3916868	0.17	0.17	0.143	0.140575	0.2396	0.1984	0.134	0.0242	0.1411	0.24	0.19	0.16	0.02	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.058238	NA	NA	NA	NA	NA	0.167	NA	3.7604
1276	1	85817295	85817295	G	A	intronic	DDAH1	NA	NA	NA	ncRNA_intronic	ENSG00000223653	NA	NA	NA	NA	NA	1p22.3	NA	NA	NA	NA	rs2076699	0.15	0.15	0.135	0.139776	0.2038	0.1558	0.2046	0.0756	0.0982	0.21	0.15	0.17	0.06	0.1695	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.650435	NA	NA	0.199884	0.086927	NA	0.123	NA	3.7601493
1276	9	137801800	137801800	T	C	exonic	FCN1	NA	synonymous SNV	FCN1:NM_002003:exon9:c.A825G:p.Q275Q	exonic	ENSG00000085265	NA	synonymous SNV	ENSG00000085265:ENST00000371806:exon9:c.A825G:p.Q275Q	NA	NA	9q34.3	NA	NA	NA	NA	rs1071583	0.64	0.64	0.674	0.683706	0.6302	0.4712	0.4784	0.9523	0.7403	0.64	0.49	0.47	0.92	0.6411	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.333025	NA	NA	0.635233	0.905356	NA	0.703	NA	3.7601336
1276	5	1470900	1470900	G	A	intronic	LPCAT1	NA	NA	NA	intronic	ENSG00000153395	NA	NA	NA	NA	NA	5p15.33	NA	Name=HNF4G_(SC-6558),RXRA,FOSL2,HNF4A_(H-171),HNF4A	NA	NA	rs2277005	0.3	0.3	0.304	0.258387	0.4354	0.2589	0.3242	0.0968	0.2474	0.42	0.23	0.39	0.14	0.3636	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.613044	NA	NA	0.44093	0.145937	NA	0.275	NA	3.76007
1276	4	2176351	2176351	G	A	intronic	POLN	NA	NA	NA	intronic	ENSG00000130997	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs12647917	0.31	0.31	0.313	0.321885	0.1243	0.373	0.2435	0.5703	0.1922	0.13	0.37	0.25	0.57	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.452739	NA	NA	0.115651	0.503613	NA	0.384	NA	3.760049
1276	10	97174164	97174164	A	G	intronic	SORBS1	NA	NA	NA	intronic	ENSG00000095637	NA	NA	NA	NA	NA	10q24.1	NA	NA	NA	NA	rs3818539	0.18	0.18	0.157	0.197684	0.1024	0.4345	0.1182	0.1044	0.2342	0.1	0.42	0.12	0.09	0.1376	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.352662	NA	NA	NA	NA	NA	0.21	NA	3.76
1276	21	43846956	43846956	T	G	intronic	UBASH3A	NA	NA	NA	intronic	ENSG00000160185	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs2839510	0.19	0.19	0.181	0.184704	0.0616	0.2708	0.1686	0.3268	0.0419	0.07	0.28	0.14	0.32	0.1043	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.344942	NA	NA	0.074186	0.285293	NA	0.174	NA	3.759914
1276	1	89733273	89733273	T	C	intronic	GBP5	NA	NA	NA	ncRNA_intronic	ENSG00000237568	NA	NA	NA	NA	NA	1p22.2	NA	NA	NA	NA	rs6690597	0.45	0.45	0.472	0.458067	0.5736	0.3264	0.3804	0.4486	0.5429	0.56	0.31	0.44	0.46	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.152684	NA	NA	NA	NA	NA	0.572	NA	3.7597333
1276	10	124594153	124594153	A	G	ncRNA_intronic	FAM24B-CUZD1	NA	NA	NA	intronic	ENSG00000138161	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs11248321	0.46	0.46	0.415	0.429912	0.5736	0.495	0.4798	0.205	0.4836	0.58	0.51	0.44	0.22	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.318649	NA	NA	NA	NA	NA	0.413	NA	3.7597333
1276	15	101447588	101447588	A	G	intronic	ALDH1A3	NA	NA	NA	ncRNA_intronic	ENSG00000259583	NA	NA	NA	NA	NA	15q26.3	NA	NA	NA	NA	rs4646684	0.64	0.64	0.659	0.673123	0.5736	0.7173	0.5159	0.7405	0.7505	0.57	0.69	0.56	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.35974	NA	NA	NA	NA	NA	0.71	NA	3.7597333
1276	3	195346945	195346945	C	A	intergenic	APOD,SDHAP2	dist=35869;dist=37965	NA	NA	ncRNA_exonic	ENSG00000224769	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs116044101	0.14	0.14	0.052	0.105631	0.1352	0.002	0.0908	0.2035	0.0603	0.15	0.08	0.17	0.2	0.1051	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.326167	NA	NA	NA	NA	NA	0.022	NA	3.7597
1276	5	175995857	175995857	G	C	intronic	CDHR2	NA	NA	NA	intronic	ENSG00000074276	NA	NA	NA	NA	NA	5q35.2	NA	NA	NA	NA	rs76514370	0.11	0.11	0.093	0.116014	0.0795	0.1587	0.1037	0.0862	0.1585	0.08	0.16	0.1	0.11	0.096	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.596708	NA	NA	0.065	0.080572	NA	0.167	NA	3.7595
1276	11	33564123	33564123	T	C	exonic	KIAA1549L	NA	synonymous SNV	KIAA1549L:NM_012194:exon1:c.T123C:p.G41G	exonic	ENSG00000110427	NA	synonymous SNV	ENSG00000110427:ENST00000265654:exon1:c.T123C:p.G41G,ENSG00000110427:ENST00000321505:exon1:c.T123C:p.G41G,ENSG00000110427:ENST00000389726:exon1:c.T123C:p.G41G	NA	NA	11p13	NA	NA	NA	NA	rs2076623	0.7	0.7	0.7	0.696885	0.6153	0.6617	0.6095	0.8918	0.6155	0.63	0.66	0.63	0.9	0.6522	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.425396	NA	NA	0.639706	0.856484	NA	0.572	NA	3.7594606
1276	4	10480452	10480452	T	C	intergenic	ZNF518B,CLNK	dist=21420;dist=11386	NA	NA	ncRNA_exonic	ENSG00000248419	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs7685949	0.2	0.2	0.173	0.195088	0.2406	0.2004	0.2839	0.0961	0.2137	0.24	0.2	0.24	0.11	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.407632	NA	NA	NA	NA	NA	0.21	NA	3.7594
1276	5	168100010	168100010	C	G	intronic	SLIT3	NA	NA	NA	intronic	ENSG00000184347	NA	NA	NA	NA	NA	5q34	NA	NA	NA	NA	rs3733975	0.34	0.34	0.301	0.315495	0.2406	0.3115	0.3746	0.4697	0.1462	0.24	0.35	0.35	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.626902	NA	NA	NA	NA	NA	0.319	NA	3.7594
1276	8	53548705	53548705	T	C	intronic	RB1CC1	NA	NA	NA	intronic	ENSG00000023287	NA	NA	NA	NA	NA	8q11.23	NA	NA	NA	NA	rs12677465	0.35	0.35	0.345	0.301717	0.2406	0.6558	0.3415	0.0953	0.2505	0.25	0.69	0.32	0.13	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.439001	1.439001	NA	NA	NA	NA	0.406	NA	3.7594
1276	9	77400718	77400718	T	C	intronic	TRPM6	NA	NA	NA	intronic	ENSG00000119121	NA	NA	NA	NA	NA	9q21.13	NA	NA	NA	NA	rs55720633	0.27	0.27	0.194	0.286741	0.2406	0.3562	0.4539	0.1649	0.3088	0.23	0.33	0.39	0.18	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.02553	NA	NA	NA	NA	NA	0.268	NA	3.7594
1276	18	14234829	14234829	A	C	intergenic	ANKRD20A5P,CYP4F35P	dist=7780;dist=102593	NA	NA	ncRNA_intronic	ENSG00000186481	NA	NA	NA	NA	NA	18p11.21	NA	NA	NA	NA	rs10853248	0.45	0.45	0.487	0.500998	0.2406	0.619	0.3732	0.7799	0.3609	0.23	0.55	0.35	0.73	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.684286	NA	NA	NA	NA	NA	0.225	NA	3.7594
1276	19	55485173	55485173	G	A	intronic	NLRP2	NA	NA	NA	intronic	ENSG00000022556	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs703467	0.3	0.3	0.302	0.275759	0.2406	0.3552	0.2262	0.3275	0.1953	0.23	0.41	0.22	0.35	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.963095	NA	NA	NA	NA	NA	0.304	NA	3.7594
1276	10	15719709	15719709	T	C	intronic	ITGA8	NA	NA	NA	intronic	ENSG00000077943	NA	NA	NA	NA	NA	10p13	NA	NA	NA	NA	rs3765585	0.15	0.15	0.159	0.147364	0.1193	0.1875	0.0865	0.1861	0.1258	0.13	0.2	0.09	0.18	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.05731	NA	NA	0.121307	0.182081	NA	0.08	NA	3.759393
1276	12	133418069	133418069	C	T	UTR3	CHFR	NM_001161347:c.*71G>A,NM_001161346:c.*71G>A,NM_001161345:c.*71G>A,NM_001161344:c.*71G>A,NM_018223:c.*71G>A	NA	NA	UTR3	ENSG00000072609	ENST00000315585:c.*71G>A,ENST00000266880:c.*71G>A,ENST00000450056:c.*71G>A,ENST00000443047:c.*71G>A,ENST00000537522:c.*71G>A,ENST00000432561:c.*71G>A	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs1045979	0.18	0.18	0.163	0.149161	0.2783	0.1736	0.1585	0.0371	0.136	0.29	0.18	0.16	0.04	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.843295	NA	NA	0.295726	0.061416	NA	0.174	NA	3.7593074
1276	14	95085465	95085465	C	G	intronic	SERPINA3	NA	NA	NA	UTR5	ENSG00000196136	ENST00000482740:c.-78C>G	NA	NA	NA	NA	14q32.13	NA	NA	NA	NA	rs8004988	0.44	0.44	0.444	0.445887	0.4076	0.3373	0.3703	0.6649	0.3548	0.41	0.3	0.41	0.66	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.601969	NA	NA	NA	NA	NA	0.413	NA	3.7590667
1276	1	89730723	89730723	C	T	intronic	GBP5	NA	NA	NA	ncRNA_intronic	ENSG00000237568	NA	NA	NA	NA	NA	1p22.2	NA	NA	NA	NA	rs9628688	0.43	0.43	0.436	0.426118	0.5746	0.3234	0.3718	0.3336	0.5429	0.56	0.3	0.44	0.37	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.42455	NA	NA	NA	NA	NA	0.558	NA	3.7587333
1276	19	55713385	55713385	A	G	intronic	PTPRH	NA	NA	NA	intronic	ENSG00000080031	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs73066689	0.06	0.06	0.061	0.0776757	0.0984	0.0397	0.0533	0.0968	0.0869	0.1	0.02	0.05	0.07	0.0716	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.515554	NA	NA	0.071279	0.095325	NA	0.109	NA	3.758721
1276	5	141316946	141316946	C	T	intronic	KIAA0141	NA	NA	NA	intronic	ENSG00000081791	NA	NA	NA	NA	NA	5q31.3	NA	NA	NA	NA	rs10064193	0.05	0.05	0.044	0.057508	0.0855	0.0099	0.0447	0.031	0.1227	0.08	0.01	0.06	0.04	0.0746	0.081	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.000204	NA	NA	0.081395	0.041534	NA	0.051	NA	3.758505
1276	9	125315393	125315393	G	A	upstream	OR1N2	NA	NA	NA	UTR5	ENSG00000171501	ENST00000373688:c.-56G>A	NA	NA	NA	NA	9q33.2	NA	NA	NA	NA	rs12684786	0.19	0.19	0.193	0.177915	0.2416	0.127	0.1974	0.1989	0.1227	0.24	0.1	0.22	0.2	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.402165	NA	NA	NA	NA	NA	0.145	NA	3.7584
1276	11	122653689	122653689	C	A	intronic	UBASH3B	NA	NA	NA	intronic	ENSG00000154127	NA	NA	NA	NA	NA	11q24.1	NA	NA	NA	NA	rs12575062	0.27	0.27	0.249	0.283147	0.2416	0.3085	0.3199	0.3306	0.2096	0.23	0.25	0.32	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.285808	NA	NA	NA	NA	NA	0.21	NA	3.7584
1276	19	33602881	33602881	C	T	intronic	GPATCH1	NA	NA	NA	intronic	ENSG00000076650	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs3786933	0.37	0.37	0.348	0.533546	0.2416	0.5079	0.2867	0.8003	0.6748	0.23	0.43	0.27	0.62	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.853939	NA	NA	NA	NA	NA	0.399	NA	3.7584
1276	22	32841503	32841503	G	A	intronic	BPIFC	NA	NA	NA	intronic	ENSG00000184459	NA	NA	NA	NA	NA	22q12.3	NA	NA	NA	NA	rs2076032	0.25	0.25	0.185	0.251597	0.2416	0.1974	0.2695	0.2723	0.2771	0.25	0.19	0.3	0.29	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.658597	NA	NA	NA	NA	NA	0.232	NA	3.7584
1276	X	35971670	35971670	A	C	intronic	CXorf22	NA	NA	NA	intronic	ENSG00000165164	NA	NA	NA	NA	NA	Xp21.1	NA	NA	NA	NA	rs6632432	0.31	0.31	0.30604	NA	NA	NA	NA	NA	NA	0.09	0.33	0.3	0.63	0.1828	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.17447	NA	NA	0.059042	0.590921	ID=COSN168730;OCCURENCE=1(large_intestine)	0.21	NA	3.758158
1276	14	21360344	21360344	G	C	UTR3	RNASE3	NM_002935:c.*16G>C	NA	NA	UTR3	ENSG00000169397	ENST00000304639:c.*16G>C	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs2233860	0.17	0.17	0.18	0.16893	0.1869	0.1161	0.1225	0.23	0.1554	0.19	0.13	0.14	0.22	0.1812	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.164774	NA	NA	0.207326	0.208942	NA	0.116	NA	3.7579074
1276	6	49705182	49705182	G	A	intronic	CRISP3	NA	NA	NA	intronic	ENSG00000096006	NA	NA	NA	NA	NA	6p12.3	NA	NA	NA	NA	rs2275597	0.07	0.07	NA	0.0882588	0.1123	0.0496	0.0865	0.0076	0.2137	0.11	0.04	0.09	0.01	0.1302	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.148712	NA	NA	NA	NA	NA	0.036	NA	3.7575
1276	2	220431458	220431458	A	C	intronic	OBSL1	NA	NA	NA	intronic	ENSG00000124006	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs62191614	0.18	0.18	0.158	0.179113	0.2425	0.1171	0.2032	0.0719	0.3057	0.24	0.13	0.23	0.09	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.23774	NA	NA	NA	NA	NA	0.181	NA	3.7575
1276	4	185687687	185687687	A	C	intronic	ACSL1	NA	NA	NA	intronic	ENSG00000151726	NA	NA	NA	NA	NA	4q35.1	NA	NA	NA	NA	rs12374289	0.24	0.24	0.238	0.229233	0.2425	0.2153	0.232	0.2511	0.1984	0.25	0.24	0.23	0.24	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.024333	NA	NA	NA	NA	NA	0.181	NA	3.7575
1276	5	40972769	40972769	G	A	intronic	C7	NA	NA	NA	intronic	ENSG00000112936	NA	NA	NA	NA	NA	5p13.1	NA	NA	NA	NA	rs34641824	0.21	0.21	0.21	0.226438	0.2425	0.3681	0.1297	0.053	0.3671	0.23	0.34	0.15	0.08	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.833585	NA	NA	NA	NA	NA	0.159	NA	3.7575
1276	5	67575642	67575642	A	G	intronic	PIK3R1	NA	NA	NA	intronic	ENSG00000145675	NA	NA	NA	NA	NA	5q13.1	NA	NA	NA	NA	rs3815701	0.21	0.21	0.181	0.22504	0.2425	0.1726	0.2536	0.2057	0.2669	0.24	0.17	0.24	0.2	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.203814	NA	NA	NA	NA	NA	0.254	NA	3.7575
1276	22	50925997	50925997	C	A	intronic	MIOX	NA	NA	NA	intronic	ENSG00000100253	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs3747273	0.23	0.23	0.23	0.202077	0.2425	0.3373	0.2305	0.0825	0.1626	0.24	0.34	0.23	0.09	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.523	NA	NA	NA	NA	NA	0.196	NA	3.7575
1276	6	117725622	117725622	G	A	intronic	ROS1	NA	NA	NA	intronic	ENSG00000047936	NA	NA	NA	NA	NA	6q22.1	NA	NA	NA	NA	rs2243377	0.06	0.06	0.059	0.0499201	0.0875	0.0437	0.0807	0.0045	0.0573	0.09	0.04	0.07	0.01	0.0685	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.637992	1.637992	NA	0.086628	0.017249	NA	0.101	NA	3.757372
1276	6	151258110	151258110	G	T	intronic	MTHFD1L	NA	NA	NA	intronic	ENSG00000120254	NA	NA	NA	NA	NA	6q25.1	NA	NA	NA	NA	rs2073189	0.17	0.17	0.132	0.1873	0.0636	0.497	0.1153	0.0257	0.2648	0.07	0.47	0.09	0.03	0.1192	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.500936	NA	NA	0.06	0.031321	NA	0.109	NA	3.7572
1276	10	129854507	129854507	C	T	intronic	PTPRE	NA	NA	NA	intronic	ENSG00000132334	NA	NA	NA	NA	NA	10q26.2	NA	NA	NA	NA	rs41282862	0.04	0.04	0.038	0.0307508	0.0855	0.001	0.0504	0.003	0.0286	0.08	0.0017	0.04	0.01	0.0617	0.096	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.795862	NA	NA	0.095814	0.01498	NA	0.036	NA	3.756986
1276	1	32696628	32696628	A	C	intronic	EIF3I	NA	NA	NA	intronic	ENSG00000084623	NA	NA	NA	NA	NA	1p35.1	NA	NA	NA	NA	rs72666795	0.16	0.16	0.148	0.210663	0.0567	0.2302	0.2349	0.2436	0.2873	0.06	0.22	0.15	0.26	0.1214	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.490828	NA	NA	0.065	0.238311	ID=COSM1627019;OCCURENCE=1(liver)	0.174	NA	3.7569
1276	9	96025052	96025052	T	C	intronic	WNK2	NA	NA	NA	intronic	ENSG00000165238	NA	NA	NA	NA	NA	9q22.31	NA	NA	NA	NA	rs7857220	0.13	0.13	0.129	0.132588	0.1362	0.001	0.1124	0.2965	0.0573	0.14	0.0017	0.13	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.153085	NA	NA	0.106936	0.273737	NA	0.094	NA	3.756864
1276	4	99341156	99341156	C	G	intronic	RAP1GDS1	NA	NA	NA	intronic	ENSG00000138698	NA	NA	NA	NA	NA	4q23	NA	NA	NA	NA	rs12512920	0.14	0.14	0.133	0.153754	0.0726	0.0397	0.1945	0.3389	0.0757	0.07	0.05	0.19	0.32	0.1063	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.508367	NA	NA	0.064405	0.27551	NA	0.145	NA	3.756695
1276	1	9307230	9307230	T	A	intronic	H6PD	NA	NA	NA	intronic	ENSG00000049239	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs12032814	0.28	0.28	0.255	0.250799	0.2435	0.4067	0.2695	0.2088	0.1411	0.24	0.43	0.22	0.21	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.106075	NA	NA	NA	NA	NA	0.239	NA	3.7565
1276	2	209051586	209051586	A	G	intronic	C2orf80	NA	NA	NA	intronic	ENSG00000188674	NA	NA	NA	NA	NA	2q34	NA	NA	NA	NA	rs7572263	0.2	0.2	0.219	0.239417	0.2435	0.0278	0.1801	0.3828	0.3016	0.23	0.02	0.19	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.696411	NA	NA	NA	NA	NA	0.21	NA	3.7565
1276	8	113364574	113364574	T	C	intronic	CSMD3	NA	NA	NA	intronic	ENSG00000164796	NA	NA	NA	NA	NA	8q23.3	NA	NA	NA	NA	rs11775013	0.26	0.26	0.231	0.248602	0.2435	0.3938	0.3156	0.0613	0.3098	0.24	0.42	0.32	0.08	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.638093	NA	NA	NA	NA	NA	0.261	NA	3.7565
1276	12	103260273	103260273	T	G	intronic	PAH	NA	NA	NA	intronic	ENSG00000171759	NA	NA	NA	NA	NA	12q23.2	NA	NA	NA	NA	rs10860933	0.32	0.32	0.309	0.302716	0.2435	0.7609	0.1888	0.0129	0.364	0.25	0.77	0.18	0.02	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.022468	NA	NA	NA	NA	NA	0.348	NA	3.7565
1276	15	81574743	81574743	C	T	intronic	IL16	NA	NA	NA	intronic	ENSG00000172349	NA	NA	NA	NA	NA	15q25.1	NA	NA	NA	NA	rs8025180	0.23	0.23	0.221	0.230631	0.2435	0.0427	0.1484	0.4818	0.1299	0.25	0.04	0.16	0.45	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.423466	NA	NA	NA	NA	NA	0.29	NA	3.7565
1276	22	23261819	23261819	G	A	intergenic	IGLL5,RTDR1	dist=23806;dist=139774	NA	NA	ncRNA_exonic	ENSG00000222037	NA	NA	NA	NA	NA	22q11.22	NA	NA	NA	NA	rs374015	0.13	0.13	0.089	0.11242	0.2435	0.0546	0.1441	0.0446	0.1063	0.23	0.07	0.12	0.05	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.777723	NA	NA	NA	NA	NA	0.13	NA	3.7565
1276	3	10140671	10140671	G	A	UTR3	FANCD2	NM_033084:c.*37G>A	NA	NA	UTR3	ENSG00000144554	ENST00000287647:c.*37G>A	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs7626117	0.31	0.31	0.338	0.345248	0.161	0.0675	0.232	0.8533	0.2147	0.17	0.1	0.25	0.84	0.2285	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.795151	NA	NA	0.187369	0.736269	NA	0.442	NA	3.7564644
1276	9	139912484	139912484	A	G	exonic	ABCA2	NA	synonymous SNV	ABCA2:NM_001606:exon15:c.T2037C:p.D679D,ABCA2:NM_212533:exon15:c.T2127C:p.D709D	exonic	ENSG00000107331	NA	synonymous SNV	ENSG00000107331:ENST00000488535:exon2:c.T78C:p.D26D,ENSG00000107331:ENST00000371605:exon14:c.T2034C:p.D678D,ENSG00000107331:ENST00000459850:exon14:c.T2124C:p.D708D,ENSG00000107331:ENST00000487109:exon14:c.T2124C:p.D708D,ENSG00000107331:ENST00000265662:exon15:c.T2037C:p.D679D,ENSG00000107331:ENST00000341511:exon15:c.T2037C:p.D679D	Score=533;Name=lod=196	NA	9q34.3	NA	NA	NA	NA	rs908832	0.96	0.96	0.959	0.963858	0.9672	0.999	0.9841	0.9168	0.9734	0.96	1	0.98	0.91	0.9732	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.355748	NA	NA	0.970176	0.945166	NA	0.971	NA	3.7560906
1276	3	48612471	48612471	G	A	intronic	COL7A1	NA	NA	NA	intronic	ENSG00000114270	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs76140443	0.05	0.05	0.039	0.0301518	0.1014	NA	0.049	0.0068	0.0061	0.09	NA	0.08	0.01	0.0631	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.506611	NA	NA	0.079493	0.012278	NA	0.007	NA	3.756007
1276	17	67212031	67212031	A	G	exonic	ABCA10	NA	synonymous SNV	ABCA10:NM_080282:exon9:c.T783C:p.Y261Y	exonic	ENSG00000154263	NA	synonymous SNV	ENSG00000154263:ENST00000518929:exon6:c.T783C:p.Y261Y,ENSG00000154263:ENST00000523419:exon6:c.T783C:p.Y261Y,ENSG00000154263:ENST00000522406:exon8:c.T783C:p.Y261Y,ENSG00000154263:ENST00000269081:exon9:c.T783C:p.Y261Y,ENSG00000154263:ENST00000416101:exon9:c.T783C:p.Y261Y,ENSG00000154263:ENST00000432313:exon9:c.T783C:p.Y261Y	NA	NA	17q24.3	NA	NA	NA	NA	rs11077414	0.47	0.47	0.457	0.471446	0.662	0.3502	0.5605	0.2526	0.6329	0.66	0.3	0.54	0.33	0.5919	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.001152	NA	NA	0.65686	0.416251	NA	0.435	NA	3.7559066
1276	2	113588793	113588793	C	T	intronic	IL1B	NA	NA	NA	intronic	ENSG00000125538	NA	NA	NA	NA	NA	2q13	NA	NA	NA	NA	rs1143639	0.15	0.15	0.132	0.134984	0.2445	0.0228	0.1254	0.1331	0.1472	0.26	0.03	0.14	0.11	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.88942	NA	NA	NA	NA	NA	0.13	NA	3.7555
1276	3	78706519	78706519	C	T	intronic	ROBO1	NA	NA	NA	intronic	ENSG00000169855	NA	NA	NA	NA	NA	3p12.3	NA	NA	NA	NA	rs9818170	0.24	0.24	0.27	0.227835	0.2445	0.2222	0.2161	0.2337	0.2168	0.26	0.24	0.21	0.24	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.461665	NA	NA	NA	NA	NA	0.21	NA	3.7555
1276	6	110942653	110942653	G	C	intronic	CDK19	NA	NA	NA	intronic	ENSG00000155111	NA	NA	NA	NA	NA	6q21	NA	NA	NA	NA	rs2272211	0.28	0.28	0.272	0.301518	0.2445	0.3879	0.3458	0.1967	0.3814	0.24	0.38	0.33	0.2	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.100789	NA	NA	NA	NA	NA	0.304	NA	3.7555
1276	9	18795304	18795304	C	T	intronic	ADAMTSL1	NA	NA	NA	intronic	ENSG00000178031	NA	NA	NA	NA	NA	9p22.1	NA	NA	NA	NA	rs2289005	0.26	0.26	0.238	0.273762	0.2445	0.2411	0.353	0.2799	0.273	0.24	0.22	0.36	0.27	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.478794	NA	NA	NA	NA	ID=COSN168477;OCCURENCE=1(large_intestine)	0.239	NA	3.7555
1276	14	107087557	107087557	T	A	intergenic	LINC00221,NONE	dist=136028;dist=NONE	NA	NA	ncRNA_intronic	ENSG00000253742	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs61995831	0.3	0.3	0.283	0.357827	0.2445	0.3333	0.3012	0.3238	0.5859	0.25	0.34	0.3	0.33	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.052242	NA	NA	NA	NA	NA	0.217	NA	3.7555
1276	16	10934114	10934114	T	C	intergenic	TVP23A,CIITA	dist=21493;dist=36941	NA	NA	downstream	ENSG00000262488	NA	NA	NA	Score=535;Name=lod=199	NA	16p13.13	NA	NA	NA	NA	rs7188603	0.77	0.77	0.77	0.771366	0.7445	0.8452	0.7968	0.671	0.8405	0.75	0.85	0.79	0.7	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.407269	NA	NA	NA	NA	NA	0.812	NA	3.7555
1276	17	78576347	78576347	G	A	intronic	RPTOR	NA	NA	NA	intronic	ENSG00000141564	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs12449366	0.2	0.2	0.181	0.17492	0.2445	0.2569	0.1787	0.0461	0.1902	0.24	0.27	0.18	0.05	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.887466	NA	NA	NA	NA	NA	0.217	NA	3.7555
1276	19	11113902	11113902	G	A	intronic	SMARCA4	NA	NA	NA	intronic	ENSG00000127616	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs2288844	0.2	0.2	0.176	0.193291	0.2445	0.2183	0.1585	0.084	0.2873	0.24	0.23	0.2	0.08	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.776482	NA	NA	NA	NA	NA	0.167	NA	3.7555
1276	22	30124968	30124968	C	T	intronic	CABP7	NA	NA	NA	intronic	ENSG00000100314	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs9614042	0.32	0.32	0.318	0.396366	0.2445	0.3046	0.3545	0.4289	0.6329	0.25	0.28	0.38	0.42	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.411713	NA	NA	NA	NA	NA	0.377	NA	3.7555
1276	17	74277039	74277039	G	A	intronic	QRICH2	NA	NA	NA	intronic	ENSG00000129646	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs72868908	0.08	0.08	0.07	0.10623	0.0765	0.003	0.2032	0.1664	0.093	0.07	0.0017	0.17	0.13	0.0887	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.005712	NA	NA	0.079302	0.145483	NA	0.072	NA	3.755498
1276	14	70713156	70713156	G	A	ncRNA_exonic	ADAM21P1	NA	NA	NA	ncRNA_exonic	ENSG00000235812	NA	NA	NA	NA	NA	14q24.2	NA	NA	NA	NA	rs11629177	0.32	0.32	0.239	0.336861	0.4742	0.1677	0.4957	0.1785	0.4714	0.46	0.17	0.47	0.19	0.4371	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.000375	NA	0.14	NA	NA	NA	0.065	NA	3.7553666
1276	13	111147846	111147846	G	A	intronic	COL4A2	NA	NA	NA	intronic	ENSG00000134871	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs912946	0.08	0.08	0.087	0.0824681	0.0924	0.001	0.0605	0.18	0.0399	0.09	NA	0.08	0.15	0.0741	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.965319	NA	NA	0.078155	0.168101	NA	0.08	NA	3.755345
1276	12	103271193	103271193	G	A	intronic	PAH	NA	NA	NA	intronic	ENSG00000171759	NA	NA	NA	NA	NA	12q23.2	NA	NA	NA	NA	rs1718301	0.3	0.3	0.293	0.294329	0.4394	0.119	0.3357	0.2496	0.3569	0.45	0.12	0.35	0.25	0.3725	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.600424	NA	NA	0.432907	0.285066	NA	0.283	CLINSIG=untested;CLNDBN=not_provided;CLNREVSTAT=not;CLNACC=RCV000088921.1;CLNDSDB=.;CLNDSDBID=.	3.755193
1277	17	74276838	74276838	A	G	intronic	QRICH2	NA	NA	NA	intronic	ENSG00000129646	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs67948583	0.09	0.09	0.07	0.113419	0.0765	0.003	0.2075	0.1914	0.093	0.08	0.0017	0.18	0.16	0.0894	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.237907	1.237907	NA	0.079186	0.164321	NA	0.138	NA	3.754914
1277	17	26695832	26695832	A	G	intronic	VTN	NA	NA	NA	ncRNA_intronic	ENSG00000258924	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs2071379	0.75	0.75	0.748	0.763978	0.5785	0.9514	0.6744	0.8835	0.6636	0.56	0.95	0.69	0.86	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.213018	NA	NA	NA	NA	NA	0.725	NA	3.7548333
1277	1	12898378	12898378	C	G	intergenic	PRAMEF11,LOC649330	dist=7114;dist=8858	NA	NA	ncRNA_exonic	ENSG00000231103	NA	NA	NA	NA	NA	1p36.21	NA	NA	NA	NA	rs57957396	0.21	0.21	0.183	0.1875	0.2455	0.2748	0.2565	0.0197	0.2157	0.24	0.28	0.27	0.03	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.110935	NA	NA	NA	NA	NA	0.087	NA	3.7545
1277	1	26527255	26527255	G	A	intronic	CATSPER4	NA	NA	NA	intronic	ENSG00000188782	NA	NA	NA	NA	NA	1p36.11	NA	NA	NA	NA	rs12145714	0.2	0.2	0.202	0.205671	0.2455	0.0218	0.1527	0.385	0.1493	0.26	0.02	0.18	0.36	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.033962	NA	NA	NA	NA	NA	0.21	NA	3.7545
1277	1	26527260	26527260	A	G	intronic	CATSPER4	NA	NA	NA	intronic	ENSG00000188782	NA	NA	NA	NA	NA	1p36.11	NA	NA	NA	NA	rs12120359	0.2	0.2	0.195	0.205671	0.2455	0.0218	0.1527	0.385	0.1493	0.26	0.02	0.18	0.36	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.853572	NA	NA	NA	NA	NA	0.21	NA	3.7545
1277	1	45813441	45813441	T	C	intronic	TESK2	NA	NA	NA	intronic	ENSG00000070759	NA	NA	NA	NA	NA	1p34.1	NA	NA	NA	NA	rs2298018	0.4	0.4	0.407	0.41893	0.2455	0.3859	0.5072	0.6467	0.2607	0.24	0.41	0.43	0.62	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.532244	NA	NA	NA	NA	NA	0.442	NA	3.7545
1277	4	79786974	79786974	T	C	intronic	BMP2K	NA	NA	NA	intronic	ENSG00000138756	NA	NA	NA	NA	NA	4q21.21	NA	NA	NA	NA	rs2288254	0.45	0.45	0.499	0.511981	0.2455	0.3313	0.402	0.9705	0.4305	0.25	0.32	0.38	0.97	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.412448	NA	NA	NA	NA	NA	0.543	NA	3.7545
1277	12	101795009	101795009	A	C	intronic	ARL1	NA	NA	NA	intronic	ENSG00000120805	NA	NA	NA	NA	NA	12q23.2	NA	NA	NA	NA	rs17500203	0.13	0.13	0.125	0.114217	0.2455	0.005	0.1239	0.0658	0.1503	0.25	0.0017	0.13	0.07	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.836236	3.836236	NA	NA	NA	NA	0.159	NA	3.7545
1277	14	107108302	107108302	T	C	intergenic	LINC00221,NONE	dist=156773;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000253936	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs8009795	0.35	0.35	0.32	0.389776	0.2455	0.3393	0.3012	0.4418	0.5828	0.27	0.35	0.37	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.314885	NA	NA	NA	NA	NA	0.341	NA	3.7545
1277	14	107108305	107108305	G	A	intergenic	LINC00221,NONE	dist=156776;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000253936	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs8008831	0.32	0.32	0.31	0.389976	0.2455	0.3393	0.3012	0.4425	0.5828	0.23	0.34	0.31	0.45	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.348481	NA	NA	NA	NA	NA	0.341	NA	3.7545
1277	17	46847524	46847524	T	A	intronic	TTLL6	NA	NA	NA	intronic	ENSG00000170703	NA	NA	NA	NA	NA	17q21.32	NA	NA	NA	NA	rs2032843	0.24	0.24	0.195	0.227636	0.2455	0.1736	0.3862	0.2209	0.1616	0.25	0.16	0.37	0.23	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.244516	NA	NA	NA	NA	NA	0.29	NA	3.7545
1277	3	4817057	4817057	T	C	exonic	ITPR1	NA	synonymous SNV	ITPR1:NM_002222:exon43:c.T5922C:p.N1974N,ITPR1:NM_001099952:exon44:c.T5967C:p.N1989N,ITPR1:NM_001168272:exon46:c.T6066C:p.N2022N	exonic	ENSG00000150995	NA	synonymous SNV	ENSG00000150995:ENST00000456211:exon43:c.T5922C:p.N1974N,ENSG00000150995:ENST00000357086:exon44:c.T5967C:p.N1989N,ENSG00000150995:ENST00000423119:exon44:c.T5967C:p.N1989N,ENSG00000150995:ENST00000443694:exon44:c.T6066C:p.N2022N,ENSG00000150995:ENST00000302640:exon46:c.T6066C:p.N2022N,ENSG00000150995:ENST00000354582:exon46:c.T6066C:p.N2022N	Score=443;Name=lod=84	NA	3p26.1	NA	NA	NA	NA	rs6442905	0.97	0.97	0.971	0.96266	0.9722	0.9782	0.9741	0.9493	0.9468	0.97	0.99	0.97	0.95	0.9701	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.740197	NA	NA	0.970286	0.954225	NA	0.986	NA	3.7540806
1277	12	56120096	56120096	C	T	intronic	CD63	NA	NA	NA	intronic	ENSG00000135404	NA	NA	NA	NA	NA	12q13.2	NA	NA	NA	NA	rs35746357	0.04	0.04	0.034	0.038738	0.0895	NA	0.0548	0.0045	0.0613	0.08	NA	0.05	0.01	0.0675	0.089	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.071805	NA	NA	0.089186	0.020427	NA	0.036	NA	3.753814
1277	2	32620722	32620722	A	T	intronic	BIRC6	NA	NA	NA	intronic	ENSG00000115760	NA	NA	NA	NA	NA	2p22.3	NA	NA	NA	NA	rs3731581	0.09	0.09	0.084	0.0836661	0.1521	0.0456	0.0937	0.0537	0.0859	0.15	0.05	0.11	0.05	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.088298	NA	NA	0.09428	0.049133	NA	0.13	NA	3.75362
1277	5	132939412	132939412	C	T	intronic	FSTL4	NA	NA	NA	intronic	ENSG00000053108	NA	NA	NA	NA	NA	5q31.1	NA	NA	NA	NA	rs72789144	0.19	0.19	0.169	0.168131	0.2465	0.253	0.1383	0.0204	0.2209	0.26	0.28	0.15	0.02	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.687696	1.687696	NA	NA	NA	NA	0.101	NA	3.7535
1277	6	42617961	42617961	T	G	intronic	UBR2	NA	NA	NA	intronic	ENSG00000024048	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs3763234	0.28	0.28	0.251	0.257788	0.2465	0.4613	0.317	0.1324	0.1871	0.24	0.45	0.32	0.13	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.685189	NA	NA	NA	NA	NA	0.275	NA	3.7535
1277	11	57456244	57456244	C	T	intronic	ZDHHC5	NA	NA	NA	intronic	ENSG00000156599	NA	NA	NA	NA	NA	11q12.1	NA	NA	NA	NA	rs549022	0.42	0.42	0.396	0.407348	0.2465	0.7966	0.4726	0.2405	0.3507	0.25	0.78	0.44	0.25	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.201092	NA	NA	NA	NA	NA	0.406	NA	3.7535
1277	12	6857898	6857898	C	A	intronic	MLF2	NA	NA	NA	intronic	ENSG00000089693	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs35247189	0.18	0.18	0.148	0.145367	0.2465	0.1597	0.2003	0.0666	0.0941	0.25	0.17	0.19	0.07	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.59787	NA	NA	NA	NA	NA	0.254	NA	3.7535
1277	12	108931779	108931779	C	A	intronic	SART3	NA	NA	NA	intronic	ENSG00000075856	NA	NA	NA	NA	NA	12q23.3	NA	NA	NA	NA	rs2287550	0.27	0.27	0.267	0.284145	0.2465	0.4663	0.1974	0.1286	0.407	0.26	0.44	0.22	0.11	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.165865	NA	NA	NA	NA	NA	0.261	NA	3.7535
1277	19	11136857	11136857	C	T	intronic	SMARCA4	NA	NA	NA	intronic	ENSG00000127616	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs1019193	0.18	0.18	0.168	0.165535	0.2465	0.1905	0.1556	0.0303	0.2464	0.24	0.21	0.2	0.04	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.754026	NA	NA	NA	NA	NA	0.174	NA	3.7535
1277	19	55481320	55481320	G	C	intronic	NLRP2	NA	NA	NA	intronic	ENSG00000022556	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs703465	0.31	0.31	0.315	0.286741	0.2465	0.3611	0.2378	0.3306	0.227	0.24	0.42	0.23	0.35	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.574572	NA	NA	NA	NA	NA	0.312	NA	3.7535
1277	7	142162148	142162148	C	T	intergenic	LOC730441,MTRNR2L6	dist=190080;dist=211983	NA	NA	exonic	ENSG00000211724	NA	nonsynonymous SNV	ENSG00000211724:ENST00000390371:exon2:c.G127A:p.A43T	NA	NA	7q34	NA	Name=GATA-1	NA	NA	rs71877	0.71	0.71	0.72	0.690296	0.6978	0.7917	0.572	0.733	0.6043	0.7	0.82	0.59	0.69	0.6719	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.160965	NA	0.54	0.710215	0.726546	NA	0.645	NA	3.7534184
1277	10	114053870	114053870	C	T	intronic	TECTB	NA	NA	NA	intronic	ENSG00000119913	NA	NA	NA	NA	NA	10q25.2	NA	NA	NA	NA	rs41298239	0.04	0.04	0.048	0.0329473	0.0895	NA	0.0548	0.0083	0.0266	0.08	NA	0.08	0.01	0.0632	0.094	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.03523	NA	NA	0.094419	0.020654	NA	0.101	NA	3.752881
1277	6	116436944	116436944	A	T	intronic	NT5DC1	NA	NA	NA	intronic	ENSG00000178425	NA	NA	NA	NA	NA	6q22.1	NA	NA	NA	NA	rs62414122	0.08	0.08	0.06	0.0708866	0.0746	0.0645	0.1816	0.0144	0.0716	0.08	0.09	0.18	0.02	0.0936	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.462816	NA	NA	0.078953	0.022015	NA	0.043	NA	3.752847
1277	1	203709068	203709068	T	C	UTR3	ATP2B4	NM_001684:c.*86T>C,NM_001001396:c.*369T>C	NA	NA	UTR3	ENSG00000058668	ENST00000357681:c.*86T>C,ENST00000391954:c.*369T>C,ENST00000367219:c.*369T>C,ENST00000367218:c.*369T>C,ENST00000341360:c.*369T>C,ENST00000484746:c.*249T>C	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs955866	0.61	0.61	0.596	0.602037	0.5805	0.502	0.7334	0.6717	0.5399	0.59	0.53	0.72	0.67	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.624079	NA	NA	NA	NA	NA	0.507	NA	3.7528334
1277	17	58040730	58040730	T	C	intronic	RNFT1	NA	NA	NA	ncRNA_intronic	ENSG00000267104	NA	NA	NA	NA	NA	17q23.1	NA	NA	NA	NA	rs4968401	0.42	0.42	0.382	0.421126	0.5805	0.4256	0.5	0.1157	0.6094	0.58	0.4	0.52	0.11	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.369527	NA	NA	NA	NA	NA	0.355	NA	3.7528333
1277	4	38880136	38880136	A	T	intronic	FAM114A1	NA	NA	NA	intronic	ENSG00000197712	NA	NA	NA	NA	NA	4p14	NA	NA	NA	NA	rs11943209	0.23	0.23	0.217	0.203275	0.2475	0.0863	0.2061	0.3192	0.1196	0.27	0.08	0.22	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.962249	1.962249	NA	NA	NA	NA	0.145	NA	3.7525
1277	4	185705006	185705006	G	A	intronic	ACSL1	NA	NA	NA	intronic	ENSG00000151726	NA	NA	NA	NA	NA	4q35.1	NA	NA	NA	NA	rs2102862	0.27	0.27	0.273	0.247005	0.2475	0.2173	0.2723	0.2912	0.1994	0.26	0.25	0.27	0.3	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.968972	NA	NA	NA	NA	NA	0.188	NA	3.7525
1277	5	178585589	178585589	C	T	intronic	ADAMTS2	NA	NA	NA	intronic	ENSG00000087116	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs41285551	0.21	0.21	0.175	0.216054	0.2475	0.3254	0.2839	0.0083	0.3037	0.24	0.33	0.25	0.01	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.09538	NA	NA	NA	NA	NA	0.138	NA	3.7525
1277	6	17817519	17817519	C	T	intronic	KIF13A	NA	NA	NA	intronic	ENSG00000137177	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs41267720	0.24	0.24	0.22	0.217851	0.2475	0.2063	0.3329	0.2103	0.1278	0.24	0.24	0.3	0.21	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.517409	NA	NA	NA	NA	NA	0.275	NA	3.7525
1277	6	42611872	42611872	A	G	intronic	UBR2	NA	NA	NA	intronic	ENSG00000024048	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs12198323	0.19	0.19	0.207	0.214457	0.2475	0.0913	0.196	0.2519	0.2699	0.24	0.09	0.15	0.27	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.004335	NA	NA	NA	NA	NA	0.217	NA	3.7525
1277	9	32987451	32987451	G	A	intronic	APTX	NA	NA	NA	intronic	ENSG00000137074	NA	NA	NA	NA	NA	9p21.1	NA	NA	NA	NA	rs884546	0.16	0.16	0.153	0.136781	0.2475	0.0317	0.1945	0.1422	0.0828	0.24	0.05	0.22	0.11	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.644786	NA	NA	NA	NA	NA	0.283	NA	3.7525
1277	9	77748151	77748151	G	A	intronic	OSTF1	NA	NA	NA	intronic	ENSG00000134996	NA	NA	NA	NA	NA	9q21.13	NA	NA	NA	NA	rs7040349	0.2	0.2	0.171	0.20627	0.2475	0.1329	0.2622	0.1831	0.2311	0.24	0.12	0.27	0.18	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.400132	NA	NA	NA	NA	NA	0.254	NA	3.7525
1277	11	113566327	113566327	C	A	intronic	TMPRSS5	NA	NA	NA	intronic	ENSG00000166682	NA	NA	NA	NA	NA	11q23.2	NA	NA	NA	NA	rs45503699	0.24	0.24	0.247	0.213458	0.2475	0.2619	0.1859	0.1135	0.2832	0.25	0.32	0.22	0.13	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.292836	NA	NA	NA	NA	NA	0.239	NA	3.7525
1277	12	120588842	120588842	C	T	intronic	GCN1L1	NA	NA	NA	intronic	ENSG00000089154	NA	NA	NA	NA	NA	12q24.23	NA	NA	NA	NA	rs3932409	0.29	0.29	0.301	0.290535	0.2475	0.4345	0.1628	0.292	0.2751	0.25	0.42	0.18	0.29	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.593014	NA	NA	NA	NA	NA	0.174	NA	3.7525
1277	12	124081094	124081094	C	T	intronic	TMED2	NA	NA	NA	intronic	ENSG00000086598	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs16917551	0.14	0.14	0.132	0.144968	0.2475	0.0119	0.1427	0.1188	0.2137	0.25	0.01	0.15	0.11	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.578872	2.578872	NA	NA	NA	NA	0.145	NA	3.7525
1277	14	100404067	100404067	A	G	intronic	EML1	NA	NA	NA	intronic	ENSG00000066629	NA	NA	NA	NA	NA	14q32.2	NA	NA	NA	NA	rs2295788	0.42	0.42	0.432	0.470647	0.2475	0.4216	0.4078	0.7829	0.3732	0.24	0.41	0.38	0.73	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.147845	NA	NA	NA	NA	NA	0.42	NA	3.7525
1277	15	79317602	79317602	C	T	intronic	RASGRF1	NA	NA	NA	intronic	ENSG00000058335	NA	NA	NA	NA	NA	15q25.1	NA	NA	NA	NA	rs2304992	0.18	0.18	0.19	0.150759	0.2475	0.1468	0.1441	0.1074	0.1186	0.24	0.15	0.18	0.13	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.225101	NA	NA	NA	NA	NA	0.188	NA	3.7525
1277	19	5663920	5663920	T	G	intronic	SAFB	NA	NA	NA	intronic	ENSG00000160633	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs3745628	0.19	0.19	0.177	0.172324	0.2475	0.0913	0.2651	0.1505	0.1421	0.23	0.1	0.25	0.17	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.048705	NA	NA	NA	NA	NA	0.217	NA	3.7525
1277	21	43236284	43236284	G	A	intronic	PRDM15	NA	NA	NA	intronic	ENSG00000141956	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs4075968	0.28	0.28	0.276	0.276757	0.2475	0.4236	0.2478	0.2262	0.2444	0.27	0.36	0.24	0.22	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.30615	NA	NA	NA	NA	NA	0.261	NA	3.7525
1277	17	45377825	45377825	T	C	intronic	ITGB3	NA	NA	NA	intronic	ENSG00000259207,ENSG00000259753	NA	NA	NA	NA	NA	17q21.32	NA	NA	NA	NA	rs11870252	0.12	0.12	0.102	0.120407	0.0815	0.1865	0.0865	0.1248	0.1104	0.06	0.21	0.11	0.09	0.0906	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.187002	NA	NA	0.075698	0.097367	ID=COSN165446;OCCURENCE=1(breast)	0.152	NA	3.752202
1277	10	129871748	129871748	G	A	intronic	PTPRE	NA	NA	NA	intronic	ENSG00000132334	NA	NA	NA	NA	NA	10q26.2	NA	NA	NA	NA	rs78196136	0.04	0.04	0.039	0.0345447	0.0875	0.001	0.0533	0.0151	0.0276	0.08	0.0017	0.05	0.01	0.0658	0.095	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.08248	NA	NA	0.094535	0.027236	NA	0.036	NA	3.752165
1277	X	2658800	2658800	T	C	intronic	CD99	NA	NA	NA	intronic	ENSG00000002586	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs312255	0.12	0.12	0.08585	NA	NA	NA	NA	NA	NA	0.14	0.04	0.2	0.12	0.1059	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.289501	NA	NA	0.142342	0.17635	NA	0.167	NA	3.751758
1277	20	24930221	24930221	G	A	intronic	CST7	NA	NA	NA	intronic	ENSG00000077984	NA	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	rs45469992	0.04	0.04	0.042	0.0397364	0.0865	0.001	0.0389	0.0061	0.0777	0.09	0.0017	0.05	0.01	0.0705	0.091	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.712285	NA	NA	0.091279	0.015433	NA	0.022	NA	3.751721
1277	1	161203227	161203227	G	A	intronic	NR1I3	NA	NA	NA	intronic	ENSG00000143257	NA	NA	NA	NA	NA	1q23.3	NA	NA	NA	NA	rs2502815	0.34	0.34	0.326	0.33766	0.2485	0.4355	0.3818	0.3563	0.272	0.25	0.42	0.35	0.39	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.446363	NA	NA	NA	NA	NA	0.246	NA	3.7515
1277	1	224605825	224605825	A	T	intronic	WDR26	NA	NA	NA	intronic	ENSG00000162923	NA	NA	NA	NA	NA	1q42.12	NA	NA	NA	NA	rs12739486	0.23	0.23	0.245	0.23103	0.2485	0.0109	0.1686	0.5068	0.1115	0.24	0.01	0.2	0.5	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.406432	NA	NA	NA	NA	NA	0.362	NA	3.7515
1277	4	166259161	166259161	C	T	intronic	MSMO1	NA	NA	NA	intronic	ENSG00000052802	NA	NA	NA	NA	NA	4q32.3	NA	NA	NA	NA	rs12501541	0.29	0.29	0.268	0.310304	0.2485	0.3462	0.4654	0.1558	0.4356	0.25	0.36	0.48	0.16	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.316109	NA	NA	NA	NA	NA	0.203	NA	3.7515
1277	6	158331150	158331150	G	A	intronic	SNX9	NA	NA	NA	intronic	ENSG00000130340	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs2076573	0.2	0.2	0.209	0.205272	0.2485	0.1369	0.1383	0.2239	0.2536	0.25	0.13	0.16	0.24	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.036242	NA	NA	NA	NA	NA	0.123	NA	3.7515
1277	7	939630	939630	G	A	intronic	ADAP1	NA	NA	NA	intronic	ENSG00000105963,ENSG00000240230	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs34786986	0.18	0.18	0.162	0.171126	0.2485	0.1379	0.3112	0.0348	0.2106	0.26	0.14	0.28	0.05	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.187611	NA	NA	NA	NA	NA	0.246	NA	3.7515
1277	12	52622984	52622984	G	A	intergenic	LINC00592,KRT7	dist=5387;dist=3970	NA	NA	ncRNA_exonic	ENSG00000257649	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs7314442	0.23	0.23	0.236	0.232428	0.2485	0.1806	0.1282	0.3313	0.2096	0.25	0.19	0.12	0.32	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.341172	NA	NA	NA	NA	NA	0.232	NA	3.7515
1277	12	55806437	55806437	T	C	intergenic	OR6C65,OR6C76	dist=11186;dist=13601	NA	NA	ncRNA_exonic	ENSG00000179899	NA	NA	NA	NA	NA	12q13.2	NA	NA	NA	NA	rs11171453	0.22	0.22	0.201	0.254193	0.2485	0.1796	0.2478	0.2753	0.3129	0.24	0.16	0.23	0.27	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.328794	NA	1	NA	NA	NA	0.239	NA	3.7515
1277	16	71319900	71319900	T	C	intronic	FTSJD1	NA	NA	NA	intronic	ENSG00000180917	NA	NA	NA	NA	NA	16q22.2	NA	NA	NA	NA	rs9928675	0.29	0.29	0.283	0.277556	0.2485	0.2093	0.4784	0.2844	0.226	0.26	0.23	0.45	0.3	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.471255	NA	NA	NA	NA	NA	0.333	NA	3.7515
1277	3	125250899	125250899	A	G	intronic	OSBPL11	NA	NA	NA	intronic	ENSG00000144909	NA	NA	NA	NA	NA	3q21.2	NA	NA	NA	NA	rs56256275	0.05	0.05	0.043	0.0427316	0.0716	0.0397	0.0937	0.0045	0.0317	0.07	0.05	0.07	0.01	0.0768	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.883227	NA	NA	0.100256	0.023604	NA	0.014	NA	3.751344
1277	1	91781576	91781576	C	A	intronic	HFM1	NA	NA	NA	intronic	ENSG00000162669	NA	NA	NA	NA	NA	1p22.2	NA	NA	NA	NA	rs12568483	0.11	0.11	0.108	0.104832	0.0726	0.1706	0.1167	0.1021	0.0654	0.09	0.14	0.15	0.1	0.0987	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.121203	NA	NA	0.077363	0.104556	NA	0.08	NA	3.751337
1277	19	41928701	41928701	C	T	intronic	BCKDHA	NA	NA	NA	intronic	ENSG00000248098,ENSG00000255730	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs284653	0.28	0.28	0.238	0.257388	0.4334	0.0913	0.3098	0.2103	0.274	0.42	0.09	0.37	0.2	0.3722	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.883506	NA	NA	0.44314	0.263958	NA	0.362	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000079270.1;CLNDSDB=.;CLNDSDBID=.	3.75126
1277	19	46025388	46025388	G	A	intronic	VASP	NA	NA	NA	intronic	ENSG00000125753	NA	NA	NA	NA	NA	19q13.32	NA	Name=Pol2-4H8	NA	NA	rs2301284	0.32	0.32	0.326	0.311102	0.4095	0.247	0.3285	0.2103	0.3998	0.4	0.27	0.35	0.23	0.3921	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.012835	NA	NA	0.447209	0.245574	NA	0.391	NA	3.751191
1277	8	95654043	95654043	C	T	intronic	ESRP1	NA	NA	NA	UTR5	ENSG00000104413	ENST00000520385:c.-4458C>T	NA	NA	NA	NA	8q22.1	NA	NA	NA	NA	rs62523409	0.39	0.39	0.372	0.371406	0.4155	0.5357	0.4251	0.0991	0.4867	0.44	0.57	0.43	0.1	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.400421	1.400421	NA	NA	NA	NA	0.435	NA	3.7511667
1277	17	76198530	76198530	T	G	intronic	AFMID	NA	NA	NA	intronic	ENSG00000183077	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs72897835	0.05	0.05	0.053	0.0401358	0.0835	0.001	0.0533	0.0106	0.0665	0.1	0.0017	0.07	0.02	0.0668	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.160674	NA	NA	0.098721	0.023831	NA	0.051	NA	3.750979
1277	2	229618184	229618184	T	A	intergenic	SPHKAP,PID1	dist=571823;dist=270505	NA	NA	ncRNA_exonic	ENSG00000237322	NA	NA	NA	NA	NA	2q36.3	NA	NA	NA	NA	rs16825347	0.24	0.24	0.247	0.228435	0.2495	0.0198	0.1988	0.5061	0.0675	0.26	0.02	0.22	0.49	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.572518	NA	NA	NA	NA	NA	0.297	NA	3.7505
1277	12	51151052	51151052	A	G	intergenic	DIP2B,ATF1	dist=8602;dist=6737	NA	NA	ncRNA_intronic	ENSG00000271018	NA	NA	NA	NA	NA	12q13.12	NA	NA	NA	NA	rs73094900	0.24	0.24	0.137	0.248003	0.2495	0.3948	0.3069	0.0552	0.3139	0.25	0.32	0.3	0.08	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.622548	NA	NA	NA	NA	NA	0.174	NA	3.7505
1277	19	21751843	21751843	A	G	intergenic	ZNF429,ZNF100	dist=30764;dist=155000	NA	NA	ncRNA_intronic	ENSG00000268081	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs11085467	NA	NA	0.294	0.179113	0.2495	0.2718	0.2695	0.0136	0.1708	NA	NA	NA	NA	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.32043	NA	NA	NA	NA	NA	0.167	NA	3.7505
1277	3	14176446	14176446	G	A	intronic	TMEM43	NA	NA	NA	intronic	ENSG00000170876	NA	NA	NA	NA	NA	3p25.1	NA	NA	NA	NA	rs6766740	0.33	0.33	0.304	0.350839	0.2495	0.4583	0.366	0.3048	0.3957	0.25	0.4	0.35	0.34	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.696651	NA	NA	NA	NA	NA	0.217	NA	3.7505
1277	7	128141136	128141136	T	G	intronic	METTL2B	NA	NA	NA	intronic	ENSG00000165055	NA	NA	NA	NA	NA	7q32.1	NA	NA	NA	NA	rs3802007	0.27	0.27	0.225	0.277955	0.2495	0.251	0.2493	0.3207	0.2975	0.24	0.24	0.28	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.022806	NA	NA	NA	NA	NA	0.261	NA	3.7505
1277	13	110861670	110861670	G	A	intronic	COL4A1	NA	NA	NA	intronic	ENSG00000187498	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs7332120	0.17	0.17	0.177	0.214257	0.2495	0.0546	0.3631	0.2579	0.1779	0.19	0.04	0.26	0.22	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.212324	NA	NA	NA	NA	ID=COSN164555;OCCURENCE=1(breast)	NA	NA	3.7505
1277	13	110861671	110861671	T	C	intronic	COL4A1	NA	NA	NA	intronic	ENSG00000187498	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs7333204	0.17	0.17	0.174	0.214257	0.2495	0.0546	0.3631	0.2579	0.1779	0.19	0.04	0.26	0.22	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.21884	NA	NA	NA	NA	ID=COSN164556;OCCURENCE=1(breast)	NA	NA	3.7505
1277	15	81430305	81430305	C	G	intronic	C15orf26	NA	NA	NA	intronic	ENSG00000156206	NA	NA	NA	NA	NA	15q25.1	NA	NA	NA	NA	rs55908952	0.12	0.12	0.113	0.0914537	0.2495	0.002	0.1354	0.0151	0.093	0.25	0.0035	0.15	0.02	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.368745	NA	NA	NA	NA	NA	0.101	NA	3.7505
1277	21	43236315	43236315	G	A	intronic	PRDM15	NA	NA	NA	intronic	ENSG00000141956	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs4075969	0.33	0.33	0.336	0.342652	0.2495	0.4226	0.2752	0.4463	0.2638	0.27	0.36	0.27	0.44	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.631818	NA	NA	NA	NA	NA	0.333	NA	3.7505
1277	12	21715801	21715801	A	G	intronic	GYS2	NA	NA	NA	intronic	ENSG00000111713	NA	NA	NA	NA	NA	12p12.1	NA	Name=TCF4	Name=4	NA	rs1473421	0.73	0.73	0.722	0.72504	0.7455	0.7629	0.7435	0.6104	0.8067	0.76	0.77	0.73	0.64	0.7528	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.745763	NA	NA	0.751395	0.652292	NA	0.601	NA	3.750305
1277	X	2658783	2658783	C	A	intronic	CD99	NA	NA	NA	intronic	ENSG00000002586	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs312256	0.12	0.12	0.09618	NA	NA	NA	NA	NA	NA	0.14	0.06	0.2	0.12	0.1073	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.804335	NA	NA	0.142458	0.177712	NA	0.167	NA	3.750242
1277	2	154801196	154801196	A	G	intronic	GALNT13	NA	NA	NA	intronic	ENSG00000144278	NA	NA	NA	NA	NA	2q23.3	NA	NA	NA	NA	rs72865049	0.06	0.06	0.057	0.0728834	0.0765	0.0833	0.0548	0.0461	0.1074	0.07	0.05	0.07	0.04	0.079	0.094	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.589571	NA	NA	0.094419	0.047435	NA	0.138	NA	3.750081
1277	2	233272146	233272146	G	C	intronic	ALPPL2	NA	NA	NA	intronic	ENSG00000163286	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs2945420	0.09	0.09	0.067	0.0922524	0.0775	0.2153	0.062	0.0393	0.0736	0.07	0.19	0.05	0.03	0.0897	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.259427	NA	NA	0.082791	0.055177	NA	0.145	NA	3.750009
1277	1	224588825	224588825	T	A	intronic	WDR26	NA	NA	NA	intronic	ENSG00000162923	NA	NA	NA	NA	NA	1q42.11	NA	NA	NA	NA	rs7518109	0.24	0.24	0.249	0.24401	0.2505	0.0109	0.17	0.553	0.1125	0.24	0.01	0.2	0.52	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.254689	NA	NA	NA	NA	NA	0.391	NA	3.7495
1277	2	128087651	128087651	C	T	intronic	MAP3K2	NA	NA	NA	intronic	ENSG00000169967	NA	NA	NA	NA	NA	2q14.3	NA	NA	NA	NA	rs61422716	0.16	0.16	0.163	0.176518	0.2505	0.001	0.1427	0.2284	0.2352	0.24	0.0017	0.14	0.23	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.089514	NA	NA	NA	NA	NA	0.333	NA	3.7495
1277	12	48145368	48145368	A	G	intronic	RAPGEF3	NA	NA	NA	intronic	ENSG00000079337	NA	NA	NA	NA	NA	12q13.11	NA	NA	NA	NA	rs2072115	0.21	0.21	0.199	0.190495	0.2505	0.1607	0.1772	0.2405	0.1012	0.24	0.15	0.2	0.23	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.059238	NA	NA	NA	NA	NA	0.159	NA	3.7495
1277	12	52623029	52623029	T	C	intergenic	LINC00592,KRT7	dist=5432;dist=3925	NA	NA	ncRNA_exonic	ENSG00000257649	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs7299945	0.21	0.21	0.201	0.23103	0.2505	0.1835	0.1239	0.3245	0.2096	0.24	0.17	0.1	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.414766	NA	NA	NA	NA	ID=COSN164251;OCCURENCE=1(NS)	0.217	NA	3.7495
1277	18	20817276	20817276	G	C	intronic	CABLES1	NA	NA	NA	intronic	ENSG00000134490,ENSG00000134508	NA	NA	NA	NA	NA	18q11.2	NA	NA	NA	NA	rs12185467	0.16	0.16	0.148	0.135383	0.2505	0.005	0.183	0.1241	0.1329	0.26	0.01	0.22	0.13	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.360666	NA	NA	NA	NA	NA	0.101	NA	3.7495
1277	11	193925	193925	G	A	intronic	LOC653486,SCGB1C1	NA	NA	NA	intronic	ENSG00000177951,ENSG00000188076	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs2294080	0.12	0.12	0.094	NA	NA	NA	NA	NA	NA	0.12	0.13	0.1	0.1	0.1447	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.378145	NA	NA	0.105844	0.090168	NA	0.08	NA	3.749456
1277	1	113657538	113657538	G	A	intronic	LRIG2	NA	NA	NA	intronic	ENSG00000198799	NA	NA	NA	NA	NA	1p13.2	NA	NA	NA	NA	rs17442872	0.05	0.05	0.051	0.0405351	0.0915	0.0308	0.0432	0.0023	0.0481	0.11	0.03	0.04	0.0041	0.0687	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.030674	NA	NA	0.090349	0.020654	NA	0.029	NA	3.749451
1277	9	36116970	36116970	C	T	intronic	RECK	NA	NA	NA	intronic	ENSG00000122707	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs3818555	0.15	0.15	0.127	0.13778	0.0835	0.251	0.1556	0.1029	0.1115	0.09	0.26	0.12	0.12	0.0991	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.055123	2.055123	NA	0.068372	0.10168	ID=COSN168539;OCCURENCE=1(large_intestine)	0.101	NA	3.749028
1277	6	44148568	44148568	C	T	intronic	CAPN11	NA	NA	NA	intronic	ENSG00000137225	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs58040611	0.08	0.08	0.075	0.0984425	0.0815	0.001	0.1009	0.1762	0.1094	0.07	0.0017	0.11	0.18	0.0858	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.60014	NA	NA	0.083749	0.153773	NA	0.13	NA	3.748951
1277	17	33353332	33353332	T	C	ncRNA_intronic	RAD51L3-RFFL	NA	NA	NA	intronic	ENSG00000092871,ENSG00000267618	NA	NA	NA	NA	NA	17q12	NA	NA	NA	NA	rs3926358	0.66	0.66	0.654	0.685104	0.5845	0.6062	0.5749	0.9123	0.6411	0.6	0.59	0.58	0.91	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.38451	NA	NA	NA	NA	NA	0.725	NA	3.7488333
1277	20	57571763	57571763	A	G	exonic	CTSZ	NA	synonymous SNV	CTSZ:NM_001336:exon5:c.T732C:p.S244S	exonic	ENSG00000101160	NA	synonymous SNV	ENSG00000101160:ENST00000217131:exon5:c.T732C:p.S244S	NA	NA	20q13.32	NA	NA	NA	NA	rs9760	0.7	0.7	0.688	0.698882	0.6352	0.7798	0.6167	0.7451	0.6769	0.64	0.81	0.66	0.72	0.6407	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.856004	NA	NA	0.642093	0.719927	NA	0.71	NA	3.7486736
1277	19	16038365	16038365	C	G	intronic	CYP4F11	NA	NA	NA	intronic	ENSG00000171903	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs2305804	0.14	0.14	0.123	0.185703	0.1223	0.1558	0.1455	0.1823	0.3149	0.12	0.13	0.15	0.18	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.520101	NA	NA	0.129164	0.131503	NA	0.072	NA	3.748536
1277	1	8415290	8415290	C	A	intronic	RERE	NA	NA	NA	intronic	ENSG00000142599	NA	NA	NA	NA	NA	1p36.23	NA	NA	NA	NA	rs1889853	0.17	0.17	0.176	0.150559	0.2515	0.1151	0.1715	0.0734	0.1728	0.25	0.12	0.2	0.08	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.185138	NA	NA	NA	NA	NA	0.159	NA	3.7485
1277	10	88819133	88819133	T	C	intronic	GLUD1	NA	NA	NA	intronic	ENSG00000148672	NA	NA	NA	NA	NA	10q23.2	NA	NA	NA	NA	rs2296062	0.47	0.47	0.467	0.434704	0.2515	0.6865	0.4179	0.5643	0.2004	0.25	0.72	0.39	0.57	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.881388	NA	NA	NA	NA	NA	0.362	NA	3.7485
1277	11	77314503	77314503	A	G	intronic	AQP11	NA	NA	NA	intronic	ENSG00000074201,ENSG00000178301	NA	NA	NA	NA	NA	11q14.1	NA	NA	NA	NA	rs2032395	0.19	0.19	0.183	0.19349	0.2515	0.1131	0.1888	0.1846	0.2321	0.24	0.11	0.23	0.18	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.515187	3.515187	NA	NA	NA	NA	0.239	NA	3.7485
1277	17	680299	680299	T	C	intronic	GLOD4	NA	NA	NA	intronic	ENSG00000167699	NA	NA	NA	NA	NA	17p13.3	NA	NA	NA	NA	rs2273453	0.15	0.15	0.137	0.148562	0.2515	0.0952	0.1787	0.0287	0.2382	0.25	0.1	0.2	0.03	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.221828	NA	NA	NA	NA	NA	0.159	NA	3.7485
1277	19	7690684	7690684	C	T	intronic	XAB2	NA	NA	NA	intronic	ENSG00000076924	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs794081	0.18	0.18	0.151	0.160743	0.2515	0.1181	0.1945	0.1233	0.138	0.25	0.12	0.2	0.13	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.706228	NA	NA	NA	NA	NA	0.181	NA	3.7485
1277	20	43559043	43559043	G	T	intronic	PABPC1L	NA	NA	NA	intronic	ENSG00000101104	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs3746580	0.23	0.23	0.201	0.226837	0.2515	0.2183	0.3415	0.1589	0.2209	0.24	0.22	0.33	0.15	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.183104	NA	NA	NA	NA	NA	0.13	NA	3.7485
1277	5	176017549	176017549	C	T	intronic	CDHR2	NA	NA	NA	intronic	ENSG00000074276	NA	NA	NA	NA	NA	5q35.2	NA	NA	Name=6	NA	rs4868662	0.25	0.25	0.22	0.223642	0.4414	0.0278	0.4063	0.1301	0.1984	0.44	0.02	0.4	0.1	0.3622	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.135991	NA	NA	0.448244	0.172265	NA	0.261	NA	3.748156
1277	11	82878393	82878393	G	A	intronic	PCF11	NA	NA	NA	intronic	ENSG00000165494	NA	NA	NA	NA	NA	11q14.1	NA	NA	NA	NA	rs17144692	0.09	0.09	0.099	0.102037	0.0795	0.0506	0.0677	0.1573	0.1278	0.07	0.05	0.08	0.18	0.088	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.290076	NA	NA	0.084668	0.143893	NA	0.116	NA	3.747832
1277	14	56125366	56125366	C	T	intronic	KTN1	NA	NA	NA	intronic	ENSG00000126777	NA	NA	NA	NA	NA	14q22.3	NA	NA	NA	NA	rs74053651	0.08	0.08	0.081	0.0860623	0.0636	0.0159	0.0836	0.1354	0.1166	0.07	0.02	0.08	0.16	0.0868	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.222666	NA	NA	0.101932	0.134589	NA	0.051	NA	3.747668
1277	5	41739684	41739684	G	A	intronic	OXCT1	NA	NA	NA	intronic	ENSG00000083720	NA	NA	NA	NA	NA	5p13.1	NA	NA	NA	NA	rs33967331	0.2	0.2	0.193	0.216653	0.2525	0.0308	0.2954	0.2897	0.2168	0.24	0.02	0.28	0.3	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.915175	NA	NA	NA	NA	NA	0.217	NA	3.7475
1277	5	145508457	145508457	T	C	intronic	LARS	NA	NA	NA	intronic	ENSG00000133706	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs2895648	0.2	0.2	0.163	0.181709	0.2525	0.1984	0.3775	0.0076	0.1881	0.25	0.2	0.3	0.02	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.490623	NA	NA	NA	NA	ID=COSN167582;OCCURENCE=1(large_intestine)	0.268	NA	3.7475
1277	5	145508471	145508471	T	C	intronic	LARS	NA	NA	NA	intronic	ENSG00000133706	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs2895649	0.2	0.2	0.173	0.181709	0.2525	0.1984	0.3775	0.0076	0.1881	0.25	0.2	0.3	0.02	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.052294	NA	NA	NA	NA	NA	0.268	NA	3.7475
1277	6	15500999	15500999	G	A	intronic	JARID2	NA	NA	NA	intronic	ENSG00000008083	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs13192234	0.22	0.22	0.205	0.199281	0.2525	0.3165	0.2176	0.0893	0.1595	0.25	0.29	0.2	0.09	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.974195	NA	NA	NA	NA	NA	0.304	NA	3.7475
1277	9	138439904	138439904	C	T	intronic	OBP2A	NA	NA	NA	intronic	ENSG00000122136	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs72766546	0.17	0.17	0.161	0.155152	0.2525	0.1567	0.1354	0.0605	0.1953	0.26	0.14	0.17	0.07	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.608594	NA	NA	NA	NA	NA	0.196	NA	3.7475
1277	10	103609704	103609704	G	T	intronic	C10orf76	NA	NA	NA	intronic	ENSG00000120029	NA	NA	NA	NA	NA	10q24.32	NA	NA	NA	NA	rs7918620	0.34	0.34	0.319	0.310703	0.2525	0.4722	0.2464	0.2837	0.2863	0.25	0.51	0.3	0.3	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.115644	NA	NA	NA	NA	NA	0.326	NA	3.7475
1277	18	30672711	30672711	A	G	intronic	CCDC178	NA	NA	NA	intronic	ENSG00000166960	NA	NA	NA	NA	NA	18q12.1	NA	NA	NA	NA	rs271474	0.15	0.15	0.157	0.149561	0.0875	0.0952	0.0937	0.3442	0.046	0.08	0.1	0.09	0.35	0.09	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.464704	NA	NA	0.075187	0.289581	NA	0.101	NA	3.747313
1277	5	83402456	83402456	C	T	intronic	EDIL3	NA	NA	NA	intronic	ENSG00000164176	NA	NA	NA	NA	NA	5q14.3	NA	NA	NA	NA	rs55742505	0.04	0.04	0.038	0.0483227	0.0825	0.0198	0.0648	0.0136	0.0777	0.08	0.01	0.07	0.01	0.0772	0.093	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.76054	1.76054	NA	0.09314	0.022242	NA	0.065	NA	3.74716
1277	2	216259479	216259479	G	A	intronic	FN1	NA	NA	NA	intronic	ENSG00000115414	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs71428382	0.04	0.04	0.038	0.0303514	0.0855	NA	0.0317	0.0061	0.0368	0.08	NA	0.03	0.01	0.066	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.664787	2.664787	NA	0.101512	0.020654	NA	0.007	NA	3.746988
1277	12	124267703	124267703	T	C	exonic	DNAH10	NA	synonymous SNV	DNAH10:NM_207437:exon7:c.T708C:p.S236S	exonic	ENSG00000197653	NA	synonymous SNV	ENSG00000197653:ENST00000409039:exon7:c.T708C:p.S236S	NA	NA	12q24.31	NA	NA	NA	NA	rs11057355	0.79	0.79	0.781	0.801318	0.6451	0.996	0.7262	0.8321	0.773	0.64	1	0.73	0.83	0.6702	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.47632	1.47632	NA	0.604651	0.788016	NA	0.667	NA	3.7467156
1277	4	69383356	69383356	A	T	intergenic	TMPRSS11E,UGT2B17	dist=20034;dist=19547	NA	NA	ncRNA_exonic	ENSG00000250566	NA	NA	NA	NA	NA	4q13.2	NA	NA	NA	NA	rs12507161	0.25	0.25	NA	0.291733	0.2535	0.2192	0.4452	0.2526	0.3497	0.21	0.26	0.36	0.22	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.124472	NA	NA	NA	NA	NA	NA	NA	3.7465
1277	4	69383357	69383357	T	A	intergenic	TMPRSS11E,UGT2B17	dist=20035;dist=19546	NA	NA	ncRNA_exonic	ENSG00000250566	NA	NA	NA	NA	NA	4q13.2	NA	NA	NA	NA	rs12507990	0.25	0.25	NA	0.291534	0.2535	0.2192	0.4438	0.2526	0.3497	0.21	0.27	0.36	0.22	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.232384	NA	NA	NA	NA	NA	NA	NA	3.7465
1277	5	145500157	145500157	A	G	intronic	LARS	NA	NA	NA	intronic	ENSG00000133706	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs11167931	0.2	0.2	0.17	0.184904	0.2535	0.1984	0.3775	0.0189	0.1881	0.25	0.2	0.3	0.04	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.433023	NA	NA	NA	NA	NA	0.275	NA	3.7465
1277	5	145539123	145539123	T	A	intronic	LARS	NA	NA	NA	intronic	ENSG00000133706	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs13182567	0.2	0.2	0.161	0.181909	0.2535	0.1984	0.3775	0.0076	0.1881	0.25	0.2	0.3	0.02	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.346718	NA	NA	NA	NA	NA	0.268	NA	3.7465
1277	9	27202662	27202662	C	T	intronic	TEK	NA	NA	NA	intronic	ENSG00000120156	NA	NA	NA	NA	NA	9p21.2	NA	NA	NA	NA	rs551519	0.17	0.17	0.169	0.154752	0.2535	0.122	0.1614	0.087	0.1738	0.25	0.12	0.2	0.11	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.000008	NA	NA	NA	NA	NA	0.181	NA	3.7465
1277	11	117784714	117784714	T	C	intronic	TMPRSS13	NA	NA	NA	intronic	ENSG00000137747	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs11216618	0.17	0.17	0.152	0.164936	0.2535	0.1181	0.1772	0.056	0.2607	0.25	0.11	0.21	0.07	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.711463	NA	NA	NA	NA	NA	0.181	NA	3.7465
1277	15	92829452	92829452	G	A	intergenic	SLCO3A1,ST8SIA2	dist=113787;dist=107688	NA	NA	ncRNA_exonic	ENSG00000258925	NA	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs28566962	0.17	0.17	0.147	0.145567	0.2535	0.0972	0.2089	0.084	0.1227	0.24	0.12	0.21	0.12	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.574786	NA	NA	NA	NA	NA	0.087	NA	3.7465
1277	19	8996182	8996182	C	T	intronic	MUC16	NA	NA	NA	intronic	ENSG00000181143	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs56136170	0.29	0.29	0.275	0.338059	0.2535	0.4067	0.2594	0.2738	0.4969	0.26	0.36	0.24	0.28	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.740569	NA	NA	NA	NA	NA	0.319	NA	3.7465
1277	19	8997343	8997343	C	T	intronic	MUC16	NA	NA	NA	intronic	ENSG00000181143	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs55785038	0.29	0.29	0.288	0.344449	0.2535	0.4058	0.2622	0.2965	0.498	0.25	0.36	0.24	0.31	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.817115	NA	NA	NA	NA	NA	0.355	NA	3.7465
1277	20	50310709	50310709	G	A	intronic	ATP9A	NA	NA	NA	intronic	ENSG00000054793	NA	NA	NA	NA	NA	20q13.2	NA	NA	NA	NA	rs6013259	0.17	0.17	0.158	0.164537	0.2535	0.004	0.1801	0.2368	0.1299	0.24	0.0035	0.19	0.23	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.603332	NA	NA	NA	NA	NA	0.101	NA	3.7465
1277	21	43231271	43231271	A	G	intronic	PRDM15	NA	NA	NA	intronic	ENSG00000141956	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs28610063	0.28	0.28	0.276	0.284944	0.2535	0.4246	0.2493	0.2352	0.2658	0.27	0.36	0.24	0.22	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.121755	NA	NA	NA	NA	NA	0.275	NA	3.7465
1277	22	30731387	30731387	C	G	intronic	SF3A1	NA	NA	NA	intronic	ENSG00000099995	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs17657174	0.18	0.18	0.175	0.153754	0.2535	0.1448	0.1571	0.1331	0.0859	0.24	0.12	0.17	0.14	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.32372	NA	NA	NA	NA	NA	0.275	NA	3.7465
1277	22	30734716	30734716	C	T	intronic	SF3A1	NA	NA	NA	intronic	ENSG00000099995	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs17730538	0.18	0.18	0.179	0.153754	0.2535	0.1448	0.1571	0.1331	0.0859	0.24	0.12	0.17	0.14	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.608354	NA	NA	NA	NA	NA	0.275	NA	3.7465
1277	22	30736559	30736559	G	A	intronic	SF3A1	NA	NA	NA	intronic	ENSG00000099995	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs13057861	0.18	0.18	0.179	0.153754	0.2535	0.1448	0.1571	0.1331	0.0859	0.24	0.12	0.17	0.14	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.488743	NA	NA	NA	NA	NA	0.268	NA	3.7465
1277	1	1689762	1689762	T	C	intronic	NADK	NA	NA	NA	intronic	ENSG00000008130	NA	NA	NA	NA	NA	1p36.33	NA	Name=ETS1	NA	NA	rs2235537	0.38	0.38	0.389	0.359625	0.4215	0.4177	0.2824	0.3336	0.3262	0.42	0.43	0.31	0.3	0.4	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.665972	NA	NA	0.432446	0.35274	NA	0.399	NA	3.746054
1277	10	97156908	97156908	T	C	intronic	SORBS1	NA	NA	NA	intronic	ENSG00000095637	NA	NA	NA	NA	NA	10q24.1	NA	NA	NA	NA	rs17110707	0.19	0.19	0.171	0.180511	0.1372	0.4226	0.1427	0.0469	0.183	0.15	0.43	0.14	0.03	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.580863	NA	NA	0.116908	0.046243	NA	0.254	NA	3.745892
1277	4	187122319	187122319	T	G	exonic	CYP4V2	NA	synonymous SNV	CYP4V2:NM_207352:exon7:c.T810G:p.A270A	exonic	ENSG00000145476	NA	synonymous SNV	ENSG00000145476:ENST00000378802:exon7:c.T810G:p.A270A	NA	NA	4q35.2	NA	NA	NA	NA	rs3736455	0.55	0.55	0.547	0.577476	0.672	0.4077	0.4914	0.6384	0.6339	0.68	0.36	0.53	0.59	0.5982	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.49645	NA	NA	0.650814	0.618702	ID=COSM149773;OCCURENCE=1(stomach)	0.457	NA	3.7456526
1277	2	71282522	71282522	A	G	intergenic	OR7E91P,NAGK	dist=25462;dist=12886	NA	NA	ncRNA_intronic	ENSG00000236469	NA	NA	NA	NA	NA	2p13.3	NA	NA	NA	NA	rs12993301	0.47	0.47	0.437	0.467851	0.2545	0.88	0.4006	0.32	0.5102	0.25	0.89	0.42	0.34	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.052354	NA	NA	NA	NA	NA	0.319	NA	3.7455
1277	6	29770187	29770187	A	C	intergenic	LOC554223,HLA-G	dist=4603;dist=24569	NA	NA	ncRNA_exonic	ENSG00000261548	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs1610655	0.22	0.22	0.193	0.228035	0.2545	0.1071	0.2421	0.2398	0.2996	0.25	0.13	0.22	0.28	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.208565	NA	NA	NA	NA	NA	0.217	NA	3.7455
1277	8	134108295	134108295	A	G	intronic	SLA,TG	NA	NA	NA	intronic	ENSG00000042832,ENSG00000155926	NA	NA	NA	NA	NA	8q24.22	NA	NA	NA	NA	rs10106820	0.16	0.16	0.144	0.153554	0.2545	0.001	0.2997	0.1558	0.1002	0.25	0.0017	0.29	0.13	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.24744	NA	NA	NA	NA	NA	0.116	NA	3.7455
1277	12	6094082	6094082	G	A	intronic	VWF	NA	NA	NA	intronic	ENSG00000110799	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs24177	0.31	0.31	0.296	0.307907	0.2545	0.4871	0.3602	0.1104	0.408	0.26	0.52	0.35	0.12	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.115961	NA	NA	NA	NA	NA	0.21	NA	3.7455
1277	13	107145829	107145829	A	T	intronic	EFNB2	NA	NA	NA	intronic	ENSG00000125266	NA	NA	NA	NA	NA	13q33.3	NA	NA	NA	NA	rs3742160	0.36	0.36	0.35	0.380192	0.2545	0.4226	0.4164	0.3911	0.4254	0.24	0.4	0.4	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.660621	NA	NA	NA	NA	NA	0.29	NA	3.7455
1277	17	40686040	40686040	C	T	intergenic	ATP6V0A1,NAGLU	dist=11443;dist=1911	NA	NA	downstream	ENSG00000267185	NA	NA	NA	Score=737;Name=lod=1314	NA	17q21.2	NA	NA	NA	NA	rs4793099	0.75	0.75	0.736	0.719449	0.7545	0.7212	0.8199	0.7428	0.5787	0.74	0.74	0.83	0.72	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.486465	NA	NA	NA	NA	NA	0.601	NA	3.7455
1277	21	43319043	43319043	C	T	intronic	C2CD2	NA	NA	NA	intronic	ENSG00000157617	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs9984905	0.24	0.24	0.256	0.251597	0.2545	0.0982	0.1599	0.3949	0.2781	0.25	0.1	0.18	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.385949	NA	NA	NA	NA	NA	0.29	NA	3.7455
1277	9	116048977	116048977	T	C	intronic	PRPF4	NA	NA	NA	intronic	ENSG00000136875	NA	NA	NA	NA	NA	9q32	NA	NA	NA	NA	rs10981714	0.13	0.13	0.131	0.128395	0.0805	0.3155	0.0476	0.0083	0.2045	0.07	0.35	0.05	0.01	0.0995	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.395709	NA	NA	0.074884	0.019519	NA	0.087	NA	3.745116
1278	X	35984887	35984887	G	A	intronic	CXorf22	NA	NA	NA	intronic	ENSG00000165164	NA	NA	NA	NA	NA	Xp21.1	NA	NA	NA	NA	rs10482306	0.32	0.32	0.31876	NA	NA	NA	NA	NA	NA	0.09	0.33	0.31	0.68	0.1942	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.350301	NA	NA	0.060957	0.670232	NA	0.217	NA	3.744843
1278	18	13068323	13068323	T	G	intronic	CEP192	NA	NA	NA	intronic	ENSG00000101639	NA	NA	NA	NA	NA	18p11.21	NA	NA	NA	NA	rs75188168	0.05	0.05	0.042	0.0369409	0.0934	NA	0.0605	0.0068	0.0409	0.09	NA	0.07	0.01	0.07	0.092	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.02074	NA	NA	0.092041	0.01793	NA	0.072	NA	3.744559
1278	10	102506103	102506103	C	A	intronic	PAX2	NA	NA	NA	intronic	ENSG00000075891	NA	NA	NA	NA	NA	10q24.31	NA	Name=ZNF263	NA	NA	rs4405241	0.51	0.51	0.431	0.499601	0.3996	0.9534	0.4683	0.1967	0.5665	0.41	0.96	0.44	0.21	0.4645	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.026408	NA	NA	0.39137	0.225374	NA	0.304	NA	3.74453
1278	1	181727030	181727030	A	T	intronic	CACNA1E	NA	NA	NA	intronic	ENSG00000198216	NA	NA	NA	NA	NA	1q25.3	NA	NA	NA	NA	rs12564606	0.22	0.22	0.219	0.271366	0.2555	0.0754	0.2896	0.3654	0.3497	0.26	0.06	0.24	0.34	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.425254	NA	NA	NA	NA	NA	0.246	NA	3.7445
1278	6	29769332	29769332	G	A	intergenic	LOC554223,HLA-G	dist=3748;dist=25424	NA	NA	ncRNA_intronic	ENSG00000261548	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs1610710	0.23	0.23	0.224	0.232228	0.2555	0.1091	0.245	0.2504	0.3016	0.25	0.14	0.22	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.229088	NA	NA	NA	NA	NA	0.254	NA	3.7445
1278	6	29769497	29769497	A	C	intergenic	LOC554223,HLA-G	dist=3913;dist=25259	NA	NA	ncRNA_exonic	ENSG00000261548	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs1610711	0.23	0.23	0.234	0.232228	0.2555	0.1091	0.245	0.2504	0.3016	0.26	0.14	0.22	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.724688	NA	NA	NA	NA	NA	0.254	NA	3.7445
1278	9	117165737	117165737	C	T	intronic	DFNB31	NA	NA	NA	intronic	ENSG00000095397	NA	NA	NA	NA	NA	9q32	NA	NA	NA	NA	rs55833018	0.19	0.19	0.208	0.181709	0.2555	0.127	0.17	0.1316	0.2382	0.25	0.13	0.21	0.13	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.26312	NA	NA	NA	NA	NA	0.152	NA	3.7445
1278	10	24822219	24822219	C	G	intronic	KIAA1217	NA	NA	NA	intronic	ENSG00000120549	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs11598911	0.12	0.12	0.102	0.109824	0.2555	0.004	0.1686	0.0121	0.1595	0.26	0.0035	0.19	0.01	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.365809	NA	NA	NA	NA	NA	0.101	NA	3.7445
1278	12	418916	418916	C	T	intronic	KDM5A	NA	NA	NA	intronic	ENSG00000073614	NA	NA	NA	NA	NA	12p13.33	NA	NA	NA	NA	rs4980877	0.41	0.41	0.412	0.419329	0.2555	0.5635	0.3415	0.5083	0.3742	0.27	0.56	0.34	0.53	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.606341	NA	NA	NA	NA	NA	0.384	NA	3.7445
1278	14	23851882	23851882	C	A	intronic	MYH6	NA	NA	NA	intronic	ENSG00000197616	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs10135780	0.21	0.21	0.195	0.223642	0.2555	0.1815	0.2277	0.1384	0.3466	0.25	0.19	0.26	0.14	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.161627	NA	NA	NA	NA	NA	0.174	NA	3.7445
1278	22	31018884	31018884	G	C	intronic	TCN2	NA	NA	NA	intronic	ENSG00000185339	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs2301958	0.23	0.23	0.234	0.223442	0.2555	0.2242	0.1974	0.2027	0.2362	0.26	0.21	0.2	0.21	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.398366	NA	NA	NA	NA	NA	0.254	NA	3.7445
1278	20	43251434	43251434	C	T	intronic	ADA	NA	NA	NA	intronic	ENSG00000168734,ENSG00000196839	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs6031679	0.09	0.09	0.093	0.114417	0.0845	0.125	0.0836	0.1074	0.1656	0.09	0.09	0.09	0.1	0.0964	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.980868	1.980868	NA	0.074651	0.084657	NA	0.072	NA	3.744449
1278	18	13068339	13068339	T	A	intronic	CEP192	NA	NA	NA	intronic	ENSG00000101639	NA	NA	NA	NA	NA	18p11.21	NA	NA	NA	NA	rs75368222	0.05	0.05	0.038	0.0369409	0.0934	NA	0.0605	0.0068	0.0409	0.09	NA	0.07	0.01	0.07	0.092	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.824745	NA	NA	0.092317	0.017743	NA	0.072	NA	3.744283
1278	13	20235992	20235992	T	C	intronic	MPHOSPH8	NA	NA	NA	intronic	ENSG00000196199	NA	NA	NA	NA	NA	13q12.11	NA	NA	NA	NA	rs9579617	0.1	0.1	0.088	0.107428	0.0964	0.0764	0.0735	0.2005	0.0491	0.09	0.06	0.06	0.2	0.0853	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.879215	NA	NA	0.074302	0.180436	NA	0.181	NA	3.743998
1278	5	101627027	101627027	T	C	intronic	SLCO4C1	NA	NA	NA	intronic	ENSG00000173930	NA	NA	NA	NA	NA	5q21.1	Score=912;Name=V$HFH3_01	NA	NA	NA	rs841929	0.53	0.53	0.55	0.557907	0.4115	0.5516	0.5821	0.7163	0.4836	0.41	0.52	0.56	0.71	0.4488	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.24312	NA	NA	0.395814	0.665456	NA	0.551	NA	3.743886
1278	6	62407067	62407067	G	T	intronic	KHDRBS2	NA	NA	NA	intronic	ENSG00000112232	NA	NA	NA	Score=461;Name=lod=100	NA	6q11.1	NA	NA	NA	NA	rs1555167	0.38	0.38	0.348	0.357628	0.4364	0.5179	0.4697	0.1619	0.2965	0.43	0.5	0.44	0.12	0.3943	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.665357	3.665357	NA	0.425465	0.200862	ID=COSN167819;OCCURENCE=1(lung),1(large_intestine)	0.384	NA	3.743835
1278	3	4403767	4403767	A	G	UTR3	SUMF1	NM_001164674:c.*61T>C,NM_001164675:c.*61T>C,NM_182760:c.*61T>C	NA	NA	UTR3	ENSG00000144455	ENST00000272902:c.*61T>C,ENST00000383843:c.*61T>C,ENST00000458465:c.*61T>C	NA	NA	NA	NA	3p26.1	NA	NA	NA	NA	rs2819561	0.67	0.67	0.651	0.704473	0.5895	0.7609	0.6744	0.7201	0.7648	0.59	0.75	0.67	0.68	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.859447	NA	NA	NA	NA	NA	0.572	NA	3.7438334
1278	19	4818378	4818378	T	C	exonic	TICAM1	NA	synonymous SNV	TICAM1:NM_182919:exon2:c.A12G:p.T4T	exonic	ENSG00000127666	NA	synonymous SNV	ENSG00000127666:ENST00000248244:exon2:c.A12G:p.T4T	NA	NA	19p13.3	NA	NA	NA	NA	rs7255265	0.71	0.71	0.723	0.725639	0.6233	0.5893	0.6671	0.9735	0.6779	0.65	0.62	0.65	0.97	0.6652	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.276417	NA	NA	0.634351	0.921101	NA	0.638	NA	3.7438156
1278	6	32975014	32975014	T	C	intronic	HLA-DOA	NA	NA	NA	intronic	ENSG00000204252	NA	NA	NA	NA	Name=Platelet counts	6p21.32	NA	NA	NA	NA	rs399604	0.4	0.4	0.363	0.392173	0.4294	0.5496	0.3501	0.3071	0.3364	0.43	0.49	0.33	0.31	0.4051	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.811199	NA	NA	0.42169	0.349682	NA	0.319	NA	3.74381
1278	6	39865047	39865047	T	C	exonic	DAAM2	NA	synonymous SNV	DAAM2:NM_001201427:exon21:c.T2607C:p.A869A,DAAM2:NM_015345:exon21:c.T2607C:p.A869A	exonic	ENSG00000146122	NA	synonymous SNV	ENSG00000146122:ENST00000274867:exon21:c.T2607C:p.A869A,ENSG00000146122:ENST00000398904:exon21:c.T2607C:p.A869A,ENSG00000146122:ENST00000538976:exon21:c.T2607C:p.A869A	NA	NA	6p21.2	NA	NA	NA	NA	rs3004067	0.73	0.73	0.719	0.756589	0.6362	0.8671	0.611	0.8283	0.773	0.63	0.9	0.58	0.79	0.6725	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.101018	NA	NA	0.614217	0.776385	NA	0.783	NA	3.7437496
1278	2	152490219	152490219	A	G	exonic	NEB	NA	synonymous SNV	NEB:NM_001164507:exon65:c.T9363C:p.P3121P,NEB:NM_001164508:exon65:c.T9363C:p.P3121P,NEB:NM_001271208:exon65:c.T9363C:p.P3121P	exonic	ENSG00000183091	NA	synonymous SNV	ENSG00000183091:ENST00000603639:exon63:c.T9363C:p.P3121P,ENSG00000183091:ENST00000604864:exon63:c.T9363C:p.P3121P,ENSG00000183091:ENST00000397345:exon65:c.T9363C:p.P3121P,ENSG00000183091:ENST00000427231:exon65:c.T9363C:p.P3121P	NA	NA	2q23.3	NA	NA	NA	NA	rs6709886	0.67	0.67	0.633	0.625998	0.6521	0.7728	0.683	0.5227	0.547	0.64	0.8	0.67	0.58	0.6362	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.683589	NA	NA	0.634821	0.515896	NA	0.58	NA	3.7435456
1278	3	191075656	191075656	G	A	intronic	CCDC50	NA	NA	NA	intronic	ENSG00000152492	NA	NA	NA	NA	NA	3q28	NA	NA	NA	NA	rs13434281	0.15	0.15	0.128	0.134984	0.2565	NA	0.2464	0.0877	0.1339	0.28	NA	0.24	0.07	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.555762	NA	NA	NA	NA	NA	0.087	NA	3.7435
1278	5	137760083	137760083	A	C	intronic	KDM3B	NA	NA	NA	intronic	ENSG00000120733	NA	NA	NA	NA	NA	5q31.2	NA	NA	NA	NA	rs740077	0.37	0.37	0.376	0.385383	0.2565	0.5813	0.255	0.4546	0.3149	0.26	0.56	0.22	0.43	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.429744	NA	NA	NA	NA	NA	0.413	NA	3.7435
1278	7	21260371	21260371	G	A	intergenic	RPL23P8,SP4	dist=392932;dist=207318	NA	NA	ncRNA_exonic	ENSG00000225308	NA	NA	NA	NA	NA	7p15.3	NA	NA	NA	NA	rs4721994	0.23	0.23	0.211	0.190296	0.2565	0.1845	0.1729	0.1778	0.1575	0.26	0.2	0.2	0.21	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.950064	NA	NA	NA	NA	NA	0.181	NA	3.7435
1278	12	6134949	6134949	C	G	intronic	VWF	NA	NA	NA	intronic	ENSG00000110799	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs56121649	0.24	0.24	0.198	0.221446	0.2565	0.003	0.1945	0.466	0.0992	0.28	0.0017	0.25	0.45	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.173779	NA	NA	NA	NA	NA	0.167	NA	3.7435
1278	12	6134987	6134987	C	A	intronic	VWF	NA	NA	NA	intronic	ENSG00000110799	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs56068059	0.24	0.24	0.208	0.221246	0.2565	0.003	0.1945	0.4652	0.0992	0.28	0.0017	0.27	0.46	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.002476	NA	NA	NA	NA	NA	0.21	NA	3.7435
1278	12	6135265	6135265	C	T	intronic	VWF	NA	NA	NA	intronic	ENSG00000110799	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs34877178	0.22	0.22	0.218	0.221046	0.2565	0.003	0.1945	0.4644	0.0992	0.25	0.0017	0.22	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.125283	NA	NA	NA	NA	NA	0.196	NA	3.7435
1278	12	6138410	6138410	T	C	intronic	VWF	NA	NA	NA	intronic	ENSG00000110799	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs11063999	0.18	0.18	0.156	0.179113	0.2565	0.003	0.1902	0.3079	0.0992	0.25	0.0017	0.22	0.27	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.275256	NA	NA	NA	NA	NA	0.159	NA	3.7435
1278	19	3434224	3434224	G	A	intronic	NFIC	NA	NA	NA	intronic	ENSG00000141905	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs2302219	0.1	0.1	0.107	0.123403	0.0785	0.131	0.0893	0.1233	0.1861	0.08	0.1	0.09	0.13	0.0967	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.734365	NA	NA	0.081512	0.123241	NA	0.08	NA	3.743288
1278	10	5204676	5204676	A	C	ncRNA_intronic	AKR1CL1	NA	NA	NA	intronic	ENSG00000196326	NA	NA	NA	NA	NA	10p15.1	NA	NA	NA	NA	rs7080497	0.41	0.41	0.404	0.399161	0.5905	0.1399	0.4568	0.4682	0.3354	0.59	0.13	0.46	0.43	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.152101	NA	NA	NA	NA	NA	0.5	NA	3.7428333
1278	15	27222098	27222098	C	G	intronic	GABRG3	NA	NA	NA	intronic	ENSG00000182256	NA	NA	NA	NA	NA	15q12	NA	NA	NA	NA	rs140671	0.11	0.11	0.123	0.129193	0.1362	0.2093	0.0793	0.0348	0.2025	0.14	0.16	0.08	0.02	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.743734	1.743734	NA	0.12109	0.054835	NA	0.051	NA	3.74271
1278	7	97617697	97617697	A	G	intronic	OCM2	NA	NA	NA	intronic	ENSG00000135175	NA	NA	NA	NA	NA	7q21.3	NA	NA	NA	NA	rs12704956	0.07	0.07	0.079	0.101038	0.0825	0.003	0.0836	0.1679	0.1431	0.08	NA	0.09	0.13	0.0869	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.148922	NA	NA	0.088023	0.125511	NA	0.087	NA	3.742577
1278	1	152195579	152195579	G	A	intronic	HRNR	NA	NA	NA	ncRNA_intronic	ENSG00000237975	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs74127901	0.3	0.3	0.27	0.330671	0.168	0.6091	0.415	0.0817	0.4877	0.17	0.62	0.35	0.09	0.2552	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.558449	1.558449	NA	0.167558	0.095552	NA	0.21	NA	3.7425753
1278	19	52383510	52383510	C	T	intronic	ZNF577	NA	NA	NA	intronic	ENSG00000161551	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs8110531	0.24	0.24	0.243	0.308706	0.1412	0.3046	0.2262	0.385	0.4407	0.13	0.3	0.25	0.33	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.51394	NA	NA	0.116279	0.362717	NA	0.203	NA	3.742521
1278	9	116857234	116857234	G	C	intronic	KIF12	NA	NA	NA	intronic	ENSG00000136883	NA	NA	NA	NA	NA	9q32	NA	NA	NA	NA	rs6478061	0.21	0.21	0.241	0.227236	0.2575	0.0377	0.1758	0.3601	0.2485	0.24	0.04	0.19	0.36	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.281368	NA	NA	NA	NA	NA	0.326	NA	3.7425
1278	11	19078022	19078022	T	C	intronic	MRGPRX2	NA	NA	NA	intronic	ENSG00000183695	NA	NA	NA	NA	NA	11p15.1	NA	NA	NA	NA	rs10833050	0.29	0.29	0.314	0.289736	0.2575	0.2639	0.2709	0.4259	0.1789	0.25	0.25	0.28	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.566362	NA	NA	NA	NA	NA	0.268	NA	3.7425
1278	11	101344177	101344177	G	A	intronic	TRPC6	NA	NA	NA	intronic	ENSG00000137672	NA	NA	NA	NA	NA	11q22.1	NA	NA	NA	NA	rs12362848	0.27	0.27	0.295	0.298922	0.2575	0.0615	0.2061	0.5862	0.2638	0.28	0.06	0.22	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.541756	NA	NA	NA	NA	NA	0.333	NA	3.7425
1278	16	539093	539093	G	C	intronic	RAB11FIP3	NA	NA	NA	intronic	ENSG00000090565	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs74390230	NA	NA	NA	0.159944	0.2575	0.0813	0.1441	0.0991	0.2342	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.097095	NA	NA	NA	NA	NA	NA	NA	3.7425
1278	16	15917321	15917321	T	C	intronic	MYH11	NA	NA	NA	intronic	ENSG00000133392	NA	NA	NA	NA	NA	16p13.11	NA	NA	NA	NA	rs2272552	0.27	0.27	0.259	0.232029	0.2575	0.255	0.1686	0.3018	0.1329	0.27	0.25	0.2	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.247787	NA	NA	NA	NA	NA	0.246	NA	3.7425
1278	17	44795234	44795234	A	G	intronic	NSF	NA	NA	NA	intronic	ENSG00000073969	NA	NA	NA	NA	NA	17q21.31	NA	NA	NA	NA	rs142167	0.41	0.41	0.412	0.36222	0.2575	0.5873	0.4323	0.3986	0.1391	0.25	0.63	0.4	0.42	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.549853	NA	NA	NA	NA	NA	0.225	NA	3.7425
1278	18	29444811	29444811	A	G	intronic	TRAPPC8	NA	NA	NA	intronic	ENSG00000153339	NA	NA	NA	NA	NA	18q12.1	NA	NA	NA	NA	rs2291239	0.28	0.28	0.254	0.310703	0.2575	0.506	0.1945	0.0915	0.5429	0.28	0.49	0.21	0.09	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.659974	1.659974	NA	NA	NA	NA	0.225	NA	3.7425
1278	2	33482586	33482586	C	T	intronic	LTBP1	NA	NA	NA	intronic	ENSG00000049323	NA	NA	NA	NA	NA	2p22.3	NA	NA	NA	NA	rs11686962	0.1	0.1	0.105	0.112021	0.0755	0.0238	0.0548	0.2708	0.0665	0.07	0.03	0.06	0.24	0.0939	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.10365	NA	NA	0.08814	0.2399	NA	0.101	NA	3.74246
1278	6	39883802	39883802	A	T	intronic	MOCS1	NA	NA	NA	intronic	ENSG00000124615	NA	NA	NA	NA	NA	6p21.2	NA	NA	NA	NA	rs34757428	0.06	0.06	0.057	0.0625	0.0805	0.0069	0.0432	0.0734	0.1002	0.09	0.0035	0.05	0.07	0.1158	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.11449	NA	NA	0.061395	0.064458	NA	0.014	NA	3.742305
1278	13	113729535	113729535	C	T	intronic	MCF2L	NA	NA	NA	intronic	ENSG00000126217	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs3764120	0.1	0.1	0.082	0.0876597	0.0775	0.2431	0.0735	0.0061	0.0583	0.07	0.22	0.11	0.01	0.1044	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.102603	NA	NA	0.075843	0.016613	NA	0.036	NA	3.742257
1278	17	30791509	30791509	C	G	intronic	PSMD11	NA	NA	NA	intronic	ENSG00000108671	NA	NA	NA	NA	NA	17q11.2	NA	NA	Name=6	NA	rs2302277	0.25	0.25	0.177	0.224641	0.4702	0.0585	0.379	0.0265	0.3016	0.49	0.06	0.36	0.04	0.3625	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.205961	NA	NA	0.425116	0.084657	ID=COSN165388;OCCURENCE=1(NS)	0.232	NA	3.742184
1278	1	203809380	203809380	G	A	intronic	ZC3H11A	NA	NA	NA	intronic	ENSG00000058673	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs13375025	0.06	0.06	0.05	0.0549121	0.1252	0.002	0.0476	0.0265	0.0808	0.12	0.0035	0.08	0.02	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.942354	NA	NA	0.132621	0.04263	NA	0.029	NA	3.742179
1278	3	39554946	39554946	C	T	UTR3	MOBP	NM_182935:c.*33C>T	NA	NA	UTR3	ENSG00000168314	ENST00000383754:c.*33C>T,ENST00000447324:c.*33C>T,ENST00000415443:c.*33C>T,ENST00000420739:c.*107C>T,ENST00000311042:c.*72C>T,ENST00000452959:c.*33C>T,ENST00000396228:c.*33C>T,ENST00000424090:c.*107C>T,ENST00000442631:c.*72C>T	NA	NA	NA	NA	3p22.1	NA	NA	NA	NA	rs552724	0.21	0.21	0.208	0.195288	0.1998	0.2242	0.2089	0.2254	0.1104	0.2	0.19	0.2	0.25	0.1957	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.409058	NA	NA	0.195698	0.23241	NA	0.167	NA	3.7421354
1278	7	98556962	98556962	C	T	intronic	TRRAP	NA	NA	NA	intronic	ENSG00000196367	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs41633	0.12	0.12	0.101	0.0888578	0.0835	0.2113	0.1369	0.0038	0.0491	0.09	0.24	0.14	0.01	0.0932	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.341518	1.341518	NA	0.081279	0.019519	NA	0.072	NA	3.742021
1278	1	91844815	91844815	T	C	intronic	HFM1	NA	NA	NA	intronic	ENSG00000162669	NA	NA	NA	NA	NA	1p22.2	NA	NA	NA	NA	rs4658219	0.12	0.12	0.098	0.108626	0.0765	0.1657	0.134	0.1036	0.0716	0.09	0.13	0.17	0.1	0.1047	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.048467	NA	NA	0.076914	0.103076	NA	0.072	NA	3.741886
1278	10	43297564	43297564	G	A	intronic	BMS1	NA	NA	NA	intronic	ENSG00000165733	NA	NA	NA	NA	NA	10q11.21	NA	NA	NA	NA	rs1539295	0.09	0.09	0.081	0.121605	0.0815	0.0258	0.1599	0.1899	0.1421	0.06	0.02	0.17	0.17	0.0991	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.364213	NA	NA	0.077558	0.174308	NA	0.072	NA	3.741842
1278	1	147230217	147230217	T	C	UTR3	GJA5	NM_005266:c.*53A>G,NM_181703:c.*53A>G	NA	NA	ncRNA_UTR3	ENSG00000143140	NA	NA	NA	NA	NA	1q21.2	NA	NA	NA	NA	rs1692141	0.85	0.85	0.843	0.880391	0.7584	0.9018	0.8804	0.9017	0.955	0.76	0.93	0.89	0.89	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.014277	NA	NA	NA	NA	NA	0.804	NA	3.7416
1278	1	159827475	159827475	G	A	intronic	VSIG8	NA	NA	NA	intronic	ENSG00000243284	NA	NA	NA	NA	NA	1q23.2	NA	NA	NA	NA	rs11584200	0.35	0.35	0.376	0.358826	0.2584	0.38	0.3012	0.5166	0.2679	0.26	0.4	0.25	0.52	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.144181	NA	NA	NA	NA	NA	0.268	NA	3.7416
1278	5	135383228	135383228	A	G	intronic	TGFBI	NA	NA	NA	intronic	ENSG00000120708	NA	NA	NA	NA	NA	5q31.1	NA	NA	NA	NA	rs764567	0.28	0.28	0.268	0.298123	0.2584	0.248	0.3329	0.3033	0.3589	0.27	0.26	0.3	0.3	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.175618	NA	NA	NA	NA	NA	0.225	NA	3.7416
1278	9	26919607	26919607	T	G	intronic	PLAA	NA	NA	NA	intronic	ENSG00000137055	NA	NA	NA	NA	NA	9p21.2	NA	NA	NA	NA	rs10120342	0.22	0.22	0.22	0.224241	0.2584	0.1855	0.1902	0.2352	0.2382	0.25	0.16	0.23	0.22	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.328494	NA	NA	NA	NA	NA	0.254	NA	3.7416
1278	9	99314012	99314012	C	T	intronic	CDC14B	NA	NA	NA	intronic	ENSG00000081377	NA	NA	NA	NA	NA	9q22.33	NA	NA	NA	NA	rs12004815	0.32	0.32	0.313	0.285144	0.2584	0.5605	0.3026	0.1762	0.1636	0.25	0.56	0.3	0.18	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.652216	2.652216	NA	NA	NA	NA	0.312	NA	3.7416
1278	10	121663483	121663483	C	T	intronic	SEC23IP	NA	NA	NA	intronic	ENSG00000107651	NA	NA	NA	NA	NA	10q26.11	NA	NA	NA	NA	rs2475304	0.38	0.38	0.368	0.35024	0.2584	0.5536	0.3458	0.407	0.1616	0.26	0.57	0.31	0.4	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.936894	NA	NA	NA	NA	NA	0.275	NA	3.7416
1278	11	19078053	19078053	G	A	intronic	MRGPRX2	NA	NA	NA	intronic	ENSG00000183695	NA	NA	NA	NA	NA	11p15.1	NA	NA	NA	NA	rs10766524	0.29	0.29	0.323	0.289537	0.2584	0.2639	0.2709	0.4251	0.1779	0.25	0.24	0.28	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.356625	NA	NA	NA	NA	NA	0.268	NA	3.7416
1278	14	107183620	107183620	T	A	intergenic	LINC00221,NONE	dist=232091;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000254056	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs3213594	0.31	0.31	0.253	0.375	0.2584	0.2937	0.2839	0.4433	0.5511	0.25	0.31	0.3	0.39	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.134538	NA	NA	NA	NA	NA	0.435	NA	3.7416
1278	15	78196530	78196530	C	T	intergenic	LOC253044,LOC645752	dist=254949;dist=10029	NA	NA	ncRNA_intronic	ENSG00000260139	NA	NA	NA	NA	NA	15q24.3	NA	NA	NA	NA	rs7179653	0.15	0.15	0.158	0.128195	0.2584	0.0516	0.111	0.1051	0.1166	0.27	0.06	0.12	0.12	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00029	NA	NA	NA	NA	NA	0.152	NA	3.7416
1278	17	3787593	3787593	G	A	intronic	CAMKK1	NA	NA	NA	intronic	ENSG00000004660	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs8082046	0.14	0.14	0.116	0.129593	0.2584	0.002	0.232	0.025	0.1973	0.27	NA	0.24	0.03	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.080307	NA	NA	NA	NA	NA	0.232	NA	3.7416
1278	19	22647287	22647287	G	T	intergenic	ZNF98,LOC440518	dist=42139;dist=131772	NA	NA	ncRNA_intronic	ENSG00000269138	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs1987409	0.26	0.26	0.222	0.296925	0.2584	0.2718	0.3199	0.2398	0.4233	0.25	0.23	0.31	0.25	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.066903	NA	NA	NA	NA	NA	0.268	NA	3.7416
1278	19	54848589	54848589	C	G	intronic	LILRA4	NA	NA	NA	intronic	ENSG00000239961	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs113109589	0.16	0.16	0.112	0.163938	0.2584	0.1181	0.2032	0.0454	0.2464	0.24	0.1	0.22	0.05	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.737517	NA	NA	NA	NA	NA	0.21	NA	3.7416
1278	20	40979430	40979430	C	T	intronic	PTPRT	NA	NA	NA	intronic	ENSG00000196090	NA	NA	NA	NA	NA	20q12	NA	NA	NA	NA	rs929071	0.43	0.43	0.394	0.42512	0.2584	0.8522	0.4697	0.2209	0.4008	0.26	0.84	0.41	0.2	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.933325	NA	NA	NA	NA	NA	0.42	NA	3.7416
1278	5	1344458	1344458	G	A	intronic	CLPTM1L	NA	NA	NA	intronic	ENSG00000049656	NA	NA	NA	NA	NA	5p15.33	NA	NA	Name=57	NA	rs31490	0.37	0.37	0.374	0.336661	0.4414	0.1885	0.2939	0.4977	0.1943	0.46	0.16	0.33	0.52	0.3785	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.504397	NA	NA	0.43859	0.4798	NA	0.406	NA	3.74151
1278	15	50288858	50288858	T	G	intronic	ATP8B4	NA	NA	NA	intronic	ENSG00000104043	NA	NA	NA	NA	NA	15q21.2	NA	NA	NA	NA	rs71469670	0.07	0.07	0.067	0.0794728	0.0825	NA	0.0634	0.118	0.1176	0.08	NA	0.05	0.14	0.0958	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.005019	2.005019	NA	0.080559	0.09795	NA	0.065	NA	3.741141
1278	4	108866058	108866058	G	A	intronic	CYP2U1	NA	NA	NA	ncRNA_intronic	ENSG00000245293	NA	NA	NA	NA	NA	4q25	NA	NA	NA	NA	rs10002671	0.66	0.66	0.654	0.650559	0.5924	0.6815	0.621	0.7761	0.5297	0.58	0.7	0.63	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.047328	NA	NA	NA	NA	NA	0.507	NA	3.7409333
1278	10	70392137	70392137	A	G	intronic	TET1	NA	NA	NA	ncRNA_exonic	ENSG00000213025	NA	NA	NA	NA	NA	10q21.3	NA	NA	NA	NA	rs11497985	0.49	0.49	0.458	0.461062	0.5924	0.5397	0.4035	0.2837	0.5256	0.59	0.52	0.47	0.33	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.094658	NA	NA	NA	NA	NA	0.406	NA	3.7409333
1278	21	11040674	11040674	C	T	intronic	BAGE2,BAGE3,BAGE4,BAGE5	NA	NA	NA	ncRNA_intronic	ENSG00000187172	NA	NA	NA	NA	NA	21p11.1	NA	NA	NA	NA	rs622874	NA	NA	NA	0.56889	0.5924	0.5685	0.5793	0.5666	0.5409	NA	NA	NA	NA	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.818698	NA	NA	NA	NA	NA	0.746	NA	3.7409333
1278	3	37083740	37083740	A	G	intronic	MLH1	NA	NA	NA	intronic	ENSG00000076242	NA	NA	NA	NA	NA	3p22.2	NA	NA	NA	NA	rs9876116	0.35	0.35	0.328	0.3123	0.4344	0.0754	0.379	0.4365	0.2157	0.44	0.09	0.43	0.44	0.3712	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.392367	NA	NA	0.453721	0.408265	NA	0.464	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=Lynch_syndrome|not_specified;CLNREVSTAT=exp|single;CLNACC=RCV000030215.2|RCV000078417.1;CLNDSDB=GeneReviews:MedGen:SNOMED_CT|.;CLNDSDBID=NBK1211:C0009405:315058005|.	3.740679
1278	1	150482738	150482738	G	A	intronic	ECM1	NA	NA	NA	intronic	ENSG00000143369	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs11205387	0.27	0.27	0.26	0.25	0.2594	0.2907	0.3098	0.1831	0.2464	0.26	0.32	0.36	0.18	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.106363	NA	NA	NA	NA	NA	0.312	NA	3.7406
1278	3	14173963	14173963	G	T	intronic	TMEM43	NA	NA	NA	intronic	ENSG00000170876	NA	NA	NA	NA	NA	3p25.1	NA	NA	NA	NA	rs4685074	0.45	0.45	0.421	0.45627	0.2594	0.6706	0.5029	0.4327	0.4366	0.26	0.65	0.49	0.47	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.85774	NA	NA	NA	NA	NA	0.312	NA	3.7406
1278	5	178563125	178563125	A	T	intronic	ADAMTS2	NA	NA	NA	intronic	ENSG00000087116	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs1549603	0.2	0.2	0.205	0.196486	0.2594	0.0992	0.2291	0.2481	0.1391	0.25	0.09	0.23	0.23	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.413464	NA	NA	NA	NA	NA	0.203	NA	3.7406
1278	14	101396148	101396148	G	A	intergenic	SNORD113-2,SNORD113-4	dist=2399;dist=6680	NA	NA	ncRNA_intronic	ENSG00000258399	NA	NA	NA	NA	NA	14q32.2	NA	NA	NA	NA	rs35436326	0.12	0.12	0.11	0.0952476	0.2594	0.0119	0.1412	0.0121	0.092	0.25	0.01	0.17	0.01	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0175	NA	NA	NA	NA	NA	0.225	NA	3.7406
1278	17	79060180	79060180	C	T	intronic	BAIAP2	NA	NA	NA	intronic	ENSG00000175866	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs7210438	0.19	0.19	0.179	0.171526	0.2594	0.122	0.1354	0.2005	0.1186	0.26	0.13	0.15	0.19	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.112547	NA	NA	NA	NA	NA	0.145	NA	3.7406
1278	10	13481530	13481530	T	C	intronic	BEND7	NA	NA	NA	intronic	ENSG00000165626	NA	NA	NA	NA	NA	10p13	NA	NA	NA	NA	rs12573063	0.09	0.09	0.081	0.0976438	0.0815	0.0923	0.1153	0.0734	0.1401	0.08	0.09	0.12	0.07	0.0935	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.751825	NA	NA	0.084419	0.078529	NA	0.051	NA	3.740581
1278	7	148801658	148801658	C	T	exonic	ZNF425	NA	synonymous SNV	ZNF425:NM_001001661:exon4:c.G1305A:p.Q435Q	exonic	ENSG00000204947	NA	synonymous SNV	ENSG00000204947:ENST00000378061:exon4:c.G1305A:p.Q435Q	NA	NA	7q36.1	NA	NA	NA	NA	rs1137432	0.61	0.61	0.571	0.603035	0.6183	0.9067	0.6643	0.1536	0.8384	0.64	0.91	0.64	0.2	0.6672	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.013314	NA	NA	0.640814	0.230595	NA	0.609	NA	3.7403526
1278	11	95519506	95519506	G	A	intronic	FAM76B	NA	NA	NA	UTR5	ENSG00000077458	ENST00000537749:c.-150C>T	NA	NA	NA	NA	11q21	NA	NA	NA	NA	rs3748253	0.34	0.34	0.348	0.271366	0.4264	0.2976	0.2752	0.1997	0.1789	0.43	0.35	0.33	0.21	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.042141	NA	NA	NA	NA	NA	0.319	NA	3.7402667
1278	7	35673870	35673870	C	T	intronic	HERPUD2	NA	NA	NA	intronic	ENSG00000122557	NA	NA	NA	NA	NA	7p14.2	NA	NA	NA	NA	rs2305334	0.22	0.22	0.217	0.193291	0.1203	0.2708	0.1772	0.2776	0.0859	0.11	0.3	0.18	0.32	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.669033	NA	NA	0.139628	0.271689	NA	0.196	NA	3.740072
1278	11	49865926	49865926	C	T	intergenic	LOC440040,OR4C13	dist=33957;dist=108017	NA	NA	intergenic	ENSG00000219061,ENSG00000254714	dist=5054;dist=6255	NA	NA	Score=415;Name=lod=65	NA	11p11.12	NA	NA	NA	NA	rs10769623	0.5	0.5	0.485	0.479433	0.5934	0.5565	0.6311	0.2413	0.4969	0.59	0.55	0.64	0.18	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.844921	NA	NA	NA	NA	NA	0.486	NA	3.7399334
1278	11	44639932	44639932	G	A	intronic	CD82	NA	NA	NA	intronic	ENSG00000085117	NA	NA	NA	NA	NA	11p11.2	NA	NA	NA	NA	rs2303862	0.16	0.16	0.157	0.211262	0.0517	0.4881	0.0807	0.0605	0.3865	0.06	0.45	0.06	0.03	0.1538	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.516217	NA	NA	0.054864	0.051764	NA	0.116	NA	3.739636
1278	4	185350307	185350307	T	C	intronic	IRF2	NA	NA	NA	intronic	ENSG00000168310	NA	NA	NA	NA	NA	4q35.1	NA	NA	NA	NA	rs807684	0.21	0.21	0.199	0.217053	0.2604	0.1161	0.3098	0.2549	0.1595	0.25	0.13	0.25	0.22	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3296	NA	NA	NA	NA	NA	0.188	NA	3.7396
1278	6	158515111	158515111	C	T	intronic	SYNJ2	NA	NA	NA	intronic	ENSG00000078269	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs13217929	0.11	0.11	0.092	0.1248	0.2604	0.0169	0.1599	0.0242	0.2076	0.23	0.01	0.17	0.02	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.982354	NA	NA	NA	NA	NA	0.145	NA	3.7396
1278	7	31011485	31011485	A	G	intronic	GHRHR	NA	NA	NA	intronic	ENSG00000106128	NA	NA	NA	NA	NA	7p14.3	NA	NA	NA	NA	rs4988501	0.2	0.2	0.195	0.214856	0.2604	0.0337	0.2219	0.2663	0.2802	0.26	0.03	0.22	0.28	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.587437	NA	NA	NA	NA	NA	0.167	NA	3.7396
1278	9	99015259	99015259	C	T	intronic	HSD17B3	NA	NA	NA	intronic	ENSG00000130948	NA	NA	NA	NA	NA	9q22.32	NA	NA	NA	NA	rs2066475	0.2	0.2	0.214	0.184505	0.2604	0.0317	0.1455	0.3071	0.1258	0.26	0.04	0.15	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.696314	NA	NA	NA	NA	NA	0.174	NA	3.7396
1278	12	85554331	85554331	C	T	intronic	LRRIQ1	NA	NA	NA	intronic	ENSG00000133640	NA	NA	NA	NA	NA	12q21.31	NA	NA	NA	NA	rs2404773	0.21	0.21	0.167	0.20647	0.2604	0.2232	0.3127	0.0446	0.2771	0.26	0.22	0.3	0.05	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.569371	NA	NA	NA	NA	ID=COSN164316;OCCURENCE=1(breast)	0.239	NA	3.7396
1278	19	14580638	14580638	T	C	intronic	PKN1	NA	NA	NA	intronic	ENSG00000123143	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs78858120	0.17	0.17	0.145	0.189497	0.0825	0.0794	0.1383	0.4735	0.0654	0.09	0.09	0.16	0.39	0.1094	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.353682	NA	NA	0.068548	0.398898	NA	0.188	NA	3.739552
1278	19	14580662	14580662	G	A	intronic	PKN1	NA	NA	NA	intronic	ENSG00000123143	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs74564226	0.17	0.17	0.151	0.184704	0.0835	0.0784	0.1398	0.4546	0.0654	0.09	0.09	0.15	0.39	0.1079	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.797069	NA	NA	0.069425	0.372639	NA	0.181	NA	3.739175
1278	11	1774934	1774934	A	G	intronic	CTSD,MOB2	NA	NA	NA	intronic	ENSG00000117984,ENSG00000250644	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs112379600	0.08	0.08	0.07	0.0804712	0.0875	0.0367	0.0634	0.1006	0.1033	0.09	0.03	0.09	0.1	0.0837	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.767345	NA	NA	0.08983	0.106088	NA	0.065	NA	3.73897
1278	3	52874446	52874446	C	T	UTR3	TMEM110	NM_198563:c.*64G>A	NA	NA	UTR3	ENSG00000213533	ENST00000355083:c.*64G>A	NA	NA	NA	NA	3p21.1	NA	NA	NA	NA	rs6769789	0.48	0.48	0.45	0.468251	0.5944	0.628	0.4352	0.2118	0.544	0.59	0.57	0.43	0.24	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.332932	NA	NA	NA	NA	NA	0.486	NA	3.7389334
1278	16	30495657	30495657	T	C	intronic	ITGAL	NA	NA	NA	ncRNA_intronic	ENSG00000261346	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs7197010	0.74	0.74	0.689	0.763179	0.5944	0.9921	0.7666	0.6808	0.8098	0.6	0.99	0.72	0.69	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.797721	NA	NA	NA	NA	NA	0.645	NA	3.7389333
1278	21	11047760	11047760	C	A	intronic	BAGE2,BAGE3,BAGE4,BAGE5	NA	NA	NA	ncRNA_intronic	ENSG00000187172	NA	NA	NA	NA	NA	21p11.1	NA	NA	NA	NA	rs455348	NA	NA	NA	0.546725	0.5944	0.5238	0.5793	0.528	0.5235	NA	NA	NA	NA	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.809211	NA	NA	NA	NA	NA	0.558	NA	3.7389333
1278	3	197411127	197411127	C	T	intronic	KIAA0226	NA	NA	NA	intronic	ENSG00000145016	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs12107435	0.09	0.09	0.088	0.0748802	0.0994	NA	0.0403	0.1528	0.046	0.1	NA	0.04	0.22	0.0747	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.832463	1.832463	NA	0.087208	0.162106	NA	0.138	NA	3.738692
1278	3	133494529	133494529	C	A	intronic	TF	NA	NA	NA	intronic	ENSG00000091513	NA	NA	NA	NA	NA	3q22.1	NA	NA	NA	NA	rs1880668	0.14	0.14	0.116	0.0972444	0.2614	0.0397	0.1527	0.0121	0.0634	0.25	0.05	0.19	0.02	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.336239	NA	NA	NA	NA	NA	0.188	NA	3.7386
1278	3	179122918	179122918	T	C	intronic	GNB4	NA	NA	NA	intronic	ENSG00000114450	NA	NA	NA	NA	NA	3q26.33	NA	NA	NA	NA	rs2287310	0.16	0.16	0.139	0.158946	0.2614	0.0764	0.2089	0.0719	0.2209	0.25	0.08	0.21	0.05	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.694976	NA	NA	NA	NA	NA	0.138	NA	3.7386
1278	4	83197551	83197551	C	T	intergenic	RASGEF1B,HNRNPD	dist=804490;dist=76916	NA	NA	ncRNA_exonic	ENSG00000234568	NA	NA	NA	NA	NA	4q21.22	NA	NA	NA	NA	rs13128457	0.29	0.29	0.255	0.227236	0.2614	0.6091	0.1297	0.0189	0.1493	0.28	0.63	0.15	0.03	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.094948	NA	0	NA	NA	NA	0.145	NA	3.7386
1278	5	15927927	15927927	A	G	intronic	FBXL7	NA	NA	NA	intronic	ENSG00000183580	NA	NA	NA	NA	NA	5p15.1	NA	NA	NA	NA	rs66504704	0.23	0.23	0.188	0.23762	0.2614	0.1726	0.2363	0.2322	0.2883	0.27	0.17	0.22	0.22	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.833734	NA	NA	NA	NA	NA	0.174	NA	3.7386
1278	6	139610124	139610124	G	T	intronic	TXLNB	NA	NA	NA	intronic	ENSG00000164440	NA	NA	NA	NA	NA	6q24.1	NA	NA	NA	NA	rs55712380	0.21	0.21	0.2	0.225439	0.2614	0.1062	0.1859	0.2277	0.3364	0.26	0.12	0.23	0.22	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.401093	NA	NA	NA	NA	NA	0.261	NA	3.7386
1278	9	35559369	35559369	G	A	intronic	RUSC2	NA	NA	NA	intronic	ENSG00000198853	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs4879906	0.22	0.22	0.179	0.172324	0.2614	0.2361	0.2767	0.0113	0.1585	0.27	0.25	0.32	0.01	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.792647	NA	NA	NA	NA	NA	0.304	NA	3.7386
1278	10	99138792	99138792	T	C	intronic	RRP12	NA	NA	NA	intronic	ENSG00000052749	NA	NA	NA	NA	NA	10q24.1	NA	NA	NA	NA	rs11189173	0.24	0.24	0.217	0.264377	0.2614	0.3125	0.2594	0.1415	0.3875	0.26	0.28	0.25	0.15	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.557565	NA	NA	NA	NA	NA	0.138	NA	3.7386
1278	12	111742222	111742222	T	C	intronic	CUX2	NA	NA	NA	intronic	ENSG00000111249	NA	NA	NA	NA	NA	12q24.12	NA	NA	NA	NA	rs1362006	0.58	0.58	0.61	0.612021	0.2614	0.8681	0.3242	0.8684	0.5665	0.25	0.89	0.39	0.85	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.357412	NA	NA	NA	NA	NA	0.471	NA	3.7386
1278	15	84373370	84373370	G	A	intronic	ADAMTSL3	NA	NA	NA	intronic	ENSG00000156218	NA	NA	NA	NA	NA	15q25.2	NA	NA	NA	NA	rs890309	0.17	0.17	0.142	0.147165	0.2614	0.0595	0.3703	0.0197	0.1339	0.26	0.07	0.35	0.03	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.039346	NA	NA	NA	NA	NA	0.145	NA	3.7386
1278	19	43876942	43876942	C	T	intergenic	CD177,TEX101	dist=9462;dist=15821	NA	NA	ncRNA_exonic	ENSG00000204933	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs72623900	0.3	0.3	0.278	0.299521	0.2614	0.5575	0.3357	0.0598	0.3712	0.27	0.54	0.29	0.08	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.85279	NA	NA	NA	NA	NA	0.333	NA	3.7386
1278	3	50416501	50416501	C	T	intronic	CACNA2D2	NA	NA	NA	intronic	ENSG00000007402	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs5030977	0.05	0.05	0.05	0.0323482	0.0934	NA	0.0418	0.0061	0.0317	0.1	NA	0.06	0.01	0.0741	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.332226	NA	NA	0.09407	0.017249	NA	0.072	NA	3.73843
1278	7	55214443	55214443	G	A	intronic	EGFR	NA	NA	NA	intronic	ENSG00000146648	NA	NA	NA	NA	NA	7p11.2	NA	NA	NA	NA	rs7801956	0.05	0.05	0.051	0.0553115	0.0934	0.0466	0.0389	0.0091	0.0992	0.09	0.04	0.06	0.01	0.0768	0.091	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.512111	NA	NA	0.091512	0.021788	NA	0.109	NA	3.738288
1278	7	5528883	5528883	G	A	intronic	FBXL18	NA	NA	NA	UTR3	ENSG00000155034	ENST00000458142:c.*555C>T	NA	NA	NA	NA	7p22.1	NA	NA	Name=14	NA	rs4724701	0.53	0.53	0.527	0.495807	0.507	0.7014	0.3775	0.4334	0.4407	0.51	0.71	0.37	0.48	0.4564	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.75503	NA	NA	0.465093	0.444635	NA	0.464	NA	3.7381737
1278	13	113729539	113729539	G	A	intronic	MCF2L	NA	NA	NA	intronic	ENSG00000126217	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs3764119	0.1	0.1	0.095	0.0874601	0.0775	0.2431	0.0735	0.0061	0.0573	0.07	0.22	0.11	0.01	0.1038	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.306347	NA	NA	0.080573	0.017882	NA	0.036	NA	3.738127
1278	8	140630990	140630990	A	G	exonic	KCNK9	NA	synonymous SNV	KCNK9:NM_016601:exon2:c.T636C:p.G212G	exonic	ENSG00000169427	NA	synonymous SNV	ENSG00000169427:ENST00000303015:exon2:c.T636C:p.G212G,ENSG00000169427:ENST00000520439:exon2:c.T636C:p.G212G,ENSG00000169427:ENST00000522317:exon2:c.T636C:p.G212G	NA	NA	8q24.3	NA	NA	NA	NA	rs2615374	0.73	0.73	0.717	0.723043	0.6431	0.6984	0.6571	0.8812	0.6636	0.65	0.72	0.68	0.89	0.6586	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.679633	NA	NA	0.627093	0.840899	NA	0.732	NA	3.7378736
1278	1	186862419	186862419	A	G	intronic	PLA2G4A	NA	NA	NA	intronic	ENSG00000116711	NA	NA	NA	NA	NA	1q31.1	NA	NA	NA	NA	rs7519192	0.23	0.23	0.174	0.271166	0.2624	0.1409	0.4957	0.1747	0.3855	0.26	0.13	0.44	0.16	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.699238	NA	NA	NA	NA	NA	0.297	NA	3.7376
1278	2	37406807	37406807	A	G	intronic	SULT6B1	NA	NA	NA	intronic	ENSG00000138068	NA	NA	NA	NA	NA	2p22.2	NA	NA	NA	NA	rs2111630	0.42	0.42	0.397	0.425919	0.2624	0.7996	0.4207	0.2322	0.4744	0.28	0.79	0.38	0.21	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.038204	NA	NA	NA	NA	NA	0.449	NA	3.7376
1278	2	174232076	174232076	G	A	intronic	CDCA7	NA	NA	NA	intronic	ENSG00000144354	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	rs3816061	0.34	0.34	0.354	0.370407	0.2624	0.3026	0.2594	0.531	0.4131	0.27	0.31	0.28	0.52	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.016637	NA	NA	NA	NA	NA	0.384	NA	3.7376
1278	3	133485371	133485371	G	C	intronic	TF	NA	NA	NA	intronic	ENSG00000091513	NA	NA	NA	NA	NA	3q22.1	NA	NA	NA	NA	rs1525891	0.17	0.17	0.15	0.146166	0.2624	0.0714	0.1599	0.1067	0.1472	0.25	0.09	0.2	0.1	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.199621	NA	NA	NA	NA	NA	0.225	NA	3.7376
1278	5	136320758	136320758	A	G	intronic	SPOCK1	NA	NA	NA	intronic	ENSG00000152377	NA	NA	NA	NA	NA	5q31.2	NA	NA	NA	NA	rs17521219	0.14	0.14	0.086	0.108427	0.2624	0.0089	0.219	0.0091	0.1084	0.27	0.01	0.23	0.01	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.077933	NA	NA	NA	NA	NA	0.152	NA	3.7376
1278	9	138440748	138440748	C	T	intronic	OBP2A	NA	NA	NA	intronic	ENSG00000122136	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs3827840	0.17	0.17	0.136	0.156949	0.2624	0.1825	0.1354	0.0393	0.1963	0.26	0.18	0.17	0.05	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.483705	NA	NA	NA	NA	NA	0.203	NA	3.7376
1278	16	20482751	20482751	A	G	intronic	ACSM2A	NA	NA	NA	intronic	ENSG00000183747	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs2271061	0.5	0.5	0.51	0.516773	0.2624	0.7758	0.2709	0.6641	0.4867	0.29	0.79	0.29	0.65	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.742362	NA	NA	NA	NA	NA	0.558	NA	3.7376
1278	19	20500515	20500515	T	C	intergenic	ZNF486,MIR1270-1	dist=189216;dist=9566	NA	NA	ncRNA_intronic	ENSG00000231205	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs2336457	0.22	0.22	0.197	0.211462	0.2624	0.1538	0.3012	0.2239	0.138	0.25	0.15	0.29	0.19	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.502477	NA	NA	NA	NA	NA	0.268	NA	3.7376
1278	19	43877081	43877081	G	T	intergenic	CD177,TEX101	dist=9601;dist=15682	NA	NA	ncRNA_exonic	ENSG00000204933	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs61525615	0.29	0.29	0.272	0.289936	0.2624	0.5575	0.3314	0.025	0.3712	0.27	0.54	0.28	0.04	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.068722	NA	0.01	NA	NA	NA	0.326	NA	3.7376
1278	19	45766729	45766729	G	A	intronic	MARK4	NA	NA	NA	intronic	ENSG00000007047	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs7255933	0.12	0.12	0.108	0.124601	0.2624	0.001	0.121	0.0212	0.2526	0.26	NA	0.13	0.04	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.456428	NA	NA	NA	NA	NA	0.232	NA	3.7376
1278	20	50290924	50290924	G	C	intronic	ATP9A	NA	NA	NA	intronic	ENSG00000054793	NA	NA	NA	NA	NA	20q13.2	NA	NA	NA	NA	rs6091347	0.16	0.16	0.132	0.159944	0.2624	0.004	0.1844	0.1762	0.1759	0.25	0.0035	0.2	0.17	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.404044	NA	NA	NA	NA	NA	0.094	NA	3.7376
1278	17	48165064	48165064	T	C	intronic	ITGA3	NA	NA	NA	intronic	ENSG00000005884	NA	NA	NA	NA	NA	17q21.33	NA	Name=Znf143_(16618-1-AP),GABP,SMC3_(ab9263),Pol2,YY1_(C-20),ELF1_(SC-631),Rad21,CTCF,CTCF_(SC-5916),Pol2-4H8,ZNF263,CTCF_(C-20),TCF12	Name=145	NA	rs12951197	0.56	0.56	0.565	0.500599	0.8052	0.2688	0.536	0.3964	0.5419	0.82	0.31	0.61	0.4	0.6647	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.177062	NA	NA	0.792674	0.429187	NA	0.572	NA	3.737426
1278	10	129899482	129899482	T	A	intronic	MKI67	NA	NA	NA	intronic	ENSG00000148773	NA	NA	NA	NA	NA	10q26.2	NA	NA	NA	NA	rs41282876	0.04	0.04	0.035	0.0397364	0.0944	NA	0.0648	0.0008	0.0593	0.09	0.0017	0.06	0.0041	0.0696	0.099	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.785706	NA	NA	0.098605	0.019065	NA	0.051	NA	3.737395
1278	1	109444370	109444370	A	T	intronic	GPSM2	NA	NA	NA	intronic	ENSG00000121957,ENSG00000162641	NA	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	rs2270536	0.07	0.07	0.069	0.0706869	0.0825	0.0129	0.0476	0.1082	0.0838	0.09	0.01	0.06	0.1	0.0848	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.091378	2.091378	NA	0.095371	0.117794	NA	0.043	NA	3.737329
1278	5	52368565	52368565	A	T	intronic	ITGA2	NA	NA	NA	intronic	ENSG00000164171	NA	NA	NA	NA	NA	5q11.2	NA	NA	NA	NA	rs3212585	0.07	0.07	0.075	0.0670927	0.0885	0.0188	0.0533	0.1044	0.0542	0.09	0.01	0.05	0.13	0.0803	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.296876	1.296876	NA	0.093881	0.094417	NA	0.08	NA	3.737319
1278	13	111111043	111111043	G	A	intronic	COL4A2	NA	NA	NA	ncRNA_intronic	ENSG00000224821	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs9521782	0.5	0.5	0.505	0.490216	0.5964	0.2232	0.4928	0.6475	0.4417	0.59	0.2	0.55	0.66	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.867668	NA	NA	NA	NA	NA	0.543	NA	3.7369333
1278	11	119181674	119181674	G	C	intronic	MCAM	NA	NA	NA	UTR3	ENSG00000076706	ENST00000392814:c.*34C>G	NA	NA	NA	NA	11q23.3	NA	NA	Name=4	NA	rs2510146	0.74	0.74	0.756	0.801118	0.6859	0.6498	0.7853	0.9864	0.8364	0.67	0.64	0.75	0.97	0.744	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.697114	NA	NA	NA	NA	NA	0.732	NA	3.7367667
1278	9	108467850	108467850	C	G	intronic	TMEM38B	NA	NA	NA	intronic	ENSG00000095209	NA	NA	NA	NA	NA	9q31.2	NA	NA	NA	NA	rs2271246	0.19	0.19	0.173	0.185903	0.0805	0.4405	0.2003	0.1067	0.1288	0.08	0.42	0.18	0.1	0.1163	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.165495	NA	NA	0.066512	0.1069	NA	0.145	NA	3.736688
1278	1	177906292	177906292	C	T	intronic	SEC16B	NA	NA	NA	intronic	ENSG00000120341,ENSG00000254154	NA	NA	NA	NA	NA	1q25.2	NA	NA	NA	NA	rs61816275	0.2	0.2	0.199	0.194489	0.2634	0.1716	0.2349	0.1014	0.2444	0.26	0.2	0.23	0.1	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.745644	1.745644	NA	NA	NA	NA	0.283	NA	3.7366
1278	1	226019371	226019371	G	T	intronic	EPHX1	NA	NA	NA	intronic	ENSG00000143819	NA	NA	NA	NA	NA	1q42.12	NA	NA	NA	NA	rs3817268	0.24	0.24	0.232	0.223642	0.2634	0.1915	0.2363	0.2277	0.2014	0.26	0.24	0.22	0.22	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.085345	NA	NA	NA	NA	NA	0.152	NA	3.7366
1278	4	20535502	20535502	T	C	intronic	SLIT2	NA	NA	NA	intronic	ENSG00000145147	NA	NA	NA	NA	NA	4p15.31	NA	NA	NA	NA	rs1092406	0.22	0.22	0.192	0.215655	0.2634	0.0357	0.1931	0.3442	0.1943	0.26	0.03	0.22	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.84053	NA	NA	NA	NA	NA	0.21	NA	3.7366
1278	5	178208021	178208021	C	T	intergenic	AACSP1,ZNF354B	dist=4744;dist=78933	NA	NA	ncRNA_intronic	ENSG00000250420	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs34178145	NA	NA	0.143	0.1252	0.2634	0.121	0.1268	0.0227	0.1247	NA	NA	NA	NA	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.729088	NA	NA	NA	NA	NA	0.109	NA	3.7366
1278	9	119903827	119903827	A	G	intronic	ASTN2	NA	NA	NA	intronic	ENSG00000148219	NA	NA	NA	NA	NA	9q33.1	NA	NA	NA	NA	rs13291457	0.18	0.18	0.15	0.162939	0.2634	0.1726	0.2017	0.0439	0.183	0.25	0.18	0.22	0.04	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.247998	NA	NA	NA	NA	NA	0.072	NA	3.7366
1278	10	11330576	11330576	C	T	intronic	CELF2	NA	NA	NA	intronic	ENSG00000048740	NA	NA	NA	NA	NA	10p14	NA	NA	NA	NA	rs2277216	0.38	0.38	0.38	0.395567	0.2634	0.5159	0.3084	0.4758	0.3609	0.26	0.52	0.34	0.45	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.223287	NA	NA	NA	NA	NA	0.225	NA	3.7366
1278	20	50305755	50305755	G	A	intronic	ATP9A	NA	NA	NA	intronic	ENSG00000054793	NA	NA	NA	NA	NA	20q13.2	NA	NA	NA	NA	rs6067898	0.17	0.17	0.156	0.16893	0.2634	0.004	0.1888	0.2345	0.1391	0.25	0.0035	0.2	0.23	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.250908	NA	NA	NA	NA	NA	0.094	NA	3.7366
1278	20	50305761	50305761	G	A	intronic	ATP9A	NA	NA	NA	intronic	ENSG00000054793	NA	NA	NA	NA	NA	20q13.2	NA	NA	NA	NA	rs6067899	0.17	0.17	0.159	0.16893	0.2634	0.004	0.1888	0.2345	0.1391	0.25	0.0035	0.2	0.23	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.042145	NA	NA	NA	NA	NA	0.094	NA	3.7366
1278	21	15311698	15311698	G	T	intergenic	C21orf15,ANKRD20A11P	dist=91013;dist=4398	NA	NA	ncRNA_exonic	ENSG00000215559	NA	NA	NA	NA	NA	21q11.2	NA	NA	NA	NA	rs440492	NA	NA	NA	0.335064	0.2634	0.4008	0.3069	0.2799	0.4356	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.272702	NA	NA	NA	NA	NA	NA	NA	3.7366
1278	8	27255003	27255003	G	A	intronic	PTK2B	NA	NA	NA	UTR5	ENSG00000120899	ENST00000517339:c.-99G>A	NA	NA	NA	NA	8p21.2	NA	NA	NA	NA	rs28496151	0.33	0.33	0.312	0.311502	0.4304	0.2748	0.3818	0.1823	0.3517	0.44	0.27	0.38	0.2	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.146112	NA	NA	NA	NA	NA	0.297	NA	3.7362667
1278	11	47814280	47814280	A	G	intronic	NUP160	NA	NA	NA	UTR3	ENSG00000030066	ENST00000528071:c.*52T>C	NA	NA	NA	NA	11p11.2	NA	NA	NA	NA	rs754434	0.32	0.32	0.31	0.345447	0.4304	0.4355	0.3199	0.084	0.5368	0.43	0.35	0.34	0.12	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.63544	NA	NA	NA	NA	NA	0.304	NA	3.7362667
1278	13	111111023	111111023	T	C	intronic	COL4A2	NA	NA	NA	ncRNA_intronic	ENSG00000224821	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs9521781	0.5	0.5	0.499	0.491014	0.5974	0.2232	0.4957	0.6483	0.4417	0.6	0.2	0.56	0.66	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.658566	NA	NA	NA	NA	NA	0.543	NA	3.7359333
1278	15	92824868	92824868	T	C	intergenic	SLCO3A1,ST8SIA2	dist=109203;dist=112272	NA	NA	ncRNA_exonic	ENSG00000258726	NA	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs10520708	0.27	0.27	0.233	0.224641	0.2644	0.3929	0.3588	0.0575	0.1411	0.25	0.4	0.34	0.08	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.410951	NA	NA	NA	NA	ID=COSN165050;OCCURENCE=1(breast)	0.116	NA	3.7356
1278	4	56840846	56840846	A	G	intronic	CEP135	NA	NA	NA	intronic	ENSG00000174799	NA	NA	NA	NA	NA	4q12	NA	NA	NA	NA	rs2290014	0.18	0.18	0.196	0.159944	0.2644	0.0873	0.1239	0.1778	0.1288	0.27	0.1	0.12	0.16	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.201674	NA	NA	NA	NA	NA	0.159	NA	3.7356
1278	16	20482623	20482623	G	T	intronic	ACSM2A	NA	NA	NA	intronic	ENSG00000183747	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs2271060	0.5	0.5	0.525	0.517173	0.2644	0.7758	0.2709	0.671	0.4775	0.28	0.79	0.28	0.66	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.892685	NA	NA	NA	NA	NA	0.601	NA	3.7356
1278	17	40452675	40452675	C	A	intronic	STAT5A	NA	NA	NA	intronic	ENSG00000126561	NA	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs2293157	0.39	0.39	0.392	0.441094	0.2644	0.3641	0.1772	0.7708	0.4438	0.27	0.35	0.2	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.877721	NA	NA	NA	NA	NA	0.406	NA	3.7356
1278	16	84493080	84493080	A	G	intronic	ATP2C2	NA	NA	NA	ncRNA_exonic	ENSG00000261286	NA	NA	NA	NA	NA	16q24.1	NA	NA	NA	NA	rs3743655	0.22	0.22	0.171	0.188698	0.3231	0.2639	0.2205	0.0461	0.1431	0.32	0.23	0.25	0.05	0.2747	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.132469	NA	NA	NA	NA	NA	0.254	NA	3.7355333
1278	8	101648271	101648271	G	A	intronic	SNX31	NA	NA	NA	intronic	ENSG00000174226	NA	NA	NA	NA	NA	8q22.3	NA	NA	NA	NA	rs2155882	0.1	0.1	0.122	0.117612	0.0765	0.006	0.0778	0.2897	0.0706	0.08	0.01	0.09	0.26	0.0944	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.550449	NA	NA	0.093953	0.243078	NA	0.123	NA	3.735147
1279	15	90346861	90346861	C	T	intronic	ANPEP	NA	NA	NA	exonic	ENSG00000166825	NA	nonsynonymous SNV	ENSG00000166825:ENST00000560030:exon2:c.G242A:p.R81H	NA	NA	15q26.1	NA	NA	NA	NA	rs2305443	0.49	0.49	0.506	0.455671	0.4781	0.5109	0.4121	0.4682	0.3896	0.5	0.55	0.44	0.44	0.4594	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.168381	NA	NA	0.494185	0.476818	NA	0.514	NA	3.7349817
1279	12	3321090	3321090	G	A	intronic	TSPAN9	NA	NA	NA	ncRNA_exonic	ENSG00000227081	NA	NA	NA	NA	NA	12p13.32	NA	NA	NA	NA	rs61907326	0.47	0.47	0.372	0.437899	0.5984	0.4315	0.6182	0.1831	0.4959	0.59	0.44	0.64	0.2	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.463875	NA	NA	NA	NA	NA	0.522	NA	3.7349333
1279	12	104496724	104496724	C	T	intronic	HCFC2	NA	NA	NA	intronic	ENSG00000111727	NA	NA	NA	NA	NA	12q23.3	NA	NA	NA	NA	rs35223676	0.15	0.15	NA	0.150559	0.1282	0.1756	0.0951	0.1505	0.1871	0.13	0.18	0.12	0.16	0.1371	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.251193	NA	NA	NA	NA	NA	0.116	NA	3.7347
1279	19	10271141	10271141	A	C	intronic	DNMT1	NA	NA	NA	intronic	ENSG00000130816	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs11672909	0.19	0.19	0.166	0.199681	0.0676	0.375	0.1844	0.1483	0.2352	0.06	0.4	0.17	0.14	0.1325	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.785976	NA	NA	0.065233	0.127553	ID=COSN165719;OCCURENCE=1(breast)	0.196	NA	3.734667
1279	7	25268094	25268094	C	T	UTR5	NPVF	NM_022150:c.-36G>A	NA	NA	UTR5	ENSG00000105954	ENST00000222674:c.-36G>A	NA	NA	NA	NA	7p15.3	NA	NA	NA	NA	rs877835	0.27	0.27	0.244	0.257987	0.1849	0.5129	0.2608	0.1309	0.2403	0.19	0.51	0.25	0.13	0.2326	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.481863	NA	NA	0.181183	0.147246	NA	0.283	NA	3.7346504
1279	2	10928710	10928710	A	C	intronic	PDIA6	NA	NA	NA	intronic	ENSG00000143870	NA	NA	NA	NA	NA	2p25.1	NA	NA	NA	NA	rs1734433	0.27	0.27	0.217	0.285144	0.2654	0.3948	0.3386	0.1203	0.3773	0.27	0.35	0.36	0.13	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.141078	NA	NA	NA	NA	NA	NA	NA	3.7346
1279	2	70033711	70033711	G	C	intronic	ANXA4	NA	NA	NA	intronic	ENSG00000196975	NA	NA	NA	NA	NA	2p13.3	NA	NA	NA	NA	rs3771539	0.34	0.34	0.308	0.373003	0.2654	0.494	0.5058	0.2943	0.3712	0.26	0.46	0.44	0.28	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.787231	NA	NA	NA	NA	NA	0.319	NA	3.7346
1279	4	72413281	72413281	T	C	intronic	SLC4A4	NA	NA	NA	intronic	ENSG00000080493	NA	NA	NA	NA	NA	4q13.3	NA	NA	NA	NA	rs2278893	0.26	0.26	0.255	0.252796	0.2654	0.4177	0.2003	0.1384	0.2618	0.26	0.43	0.18	0.12	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.928093	1.928093	NA	NA	NA	NA	0.174	NA	3.7346
1279	5	98210690	98210690	A	C	intronic	CHD1	NA	NA	NA	intronic	ENSG00000153922	NA	NA	NA	NA	NA	5q21.1	NA	NA	NA	NA	rs7718898	0.3	0.3	0.266	0.340655	0.2654	0.3264	0.2723	0.348	0.4714	0.27	0.29	0.31	0.32	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.706078	1.706078	NA	NA	NA	NA	0.326	NA	3.7346
1279	5	145512390	145512390	G	C	intronic	LARS	NA	NA	NA	intronic	ENSG00000133706	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs35869904	0.2	0.2	0.129	0.188099	0.2654	0.2063	0.3919	0.0083	0.1881	0.25	0.2	0.3	0.02	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.064072	NA	NA	NA	NA	NA	0.087	NA	3.7346
1279	10	15029315	15029315	A	C	intergenic	MEIG1,OLAH	dist=14465;dist=56580	NA	NA	ncRNA_exonic	ENSG00000235623	NA	NA	NA	NA	NA	10p13	NA	NA	NA	NA	rs11259420	0.27	0.27	0.229	0.305911	0.2654	0.3016	0.2622	0.326	0.3558	0.24	0.27	0.25	0.34	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.458496	NA	NA	NA	NA	NA	0.145	NA	3.7346
1279	11	116628401	116628401	T	C	intronic	BUD13	NA	NA	NA	intronic	ENSG00000137656	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs2075295	0.34	0.34	0.307	0.370807	0.2654	0.3849	0.438	0.3366	0.4632	0.25	0.42	0.4	0.33	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.891608	NA	NA	NA	NA	NA	0.29	NA	3.7346
1279	19	20874651	20874651	T	C	intergenic	ZNF626,ZNF85	dist=30249;dist=231408	NA	NA	ncRNA_exonic	ENSG00000269779	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs6511151	0.27	0.27	0.244	0.269968	0.2654	0.3601	0.366	0.1815	0.2331	0.25	0.36	0.32	0.18	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.179272	NA	NA	NA	NA	NA	0.254	NA	3.7346
1279	19	20874738	20874738	C	G	intergenic	ZNF626,ZNF85	dist=30336;dist=231321	NA	NA	ncRNA_exonic	ENSG00000269779	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs6511152	0.27	0.27	0.235	0.269768	0.2654	0.3601	0.366	0.1815	0.2321	0.25	0.36	0.32	0.18	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.652178	NA	NA	NA	NA	NA	0.232	NA	3.7346
1279	19	7734814	7734814	C	T	intronic	RETN	NA	NA	NA	intronic	ENSG00000104918	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs34788323	0.07	0.07	0.063	0.0952476	0.0865	0.0069	0.0634	0.09	0.2249	0.08	0.01	0.09	0.09	0.0929	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.159098	NA	NA	0.086512	0.078529	NA	0.123	NA	3.734088
1279	1	32203218	32203218	C	A	intronic	BAI2	NA	NA	NA	intronic	ENSG00000121753	NA	NA	NA	NA	NA	1p35.2	NA	NA	NA	NA	rs2271932	0.08	0.08	0.037	0.0726837	0.0716	0.0794	0.1542	0.0204	0.0798	0.08	0.08	0.15	0.02	0.1035	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.340294	NA	NA	0.090835	0.030413	NA	0.072	NA	3.734065
1279	19	41283365	41283365	C	G	ncRNA_UTR3	MIA	NA	NA	NA	UTR3	ENSG00000261857	ENST00000594436:c.*40C>G,ENST00000263369:c.*40C>G,ENST00000597140:c.*93C>G,ENST00000601159:c.*119C>G	NA	NA	NA	NA	19q13.2	NA	Name=POU2F2,TAF1,PU.1,SP1,Pol2,Oct-2,RFX5_(N-494),BCL3,NFKB,IRF3,ZBTB7A_(SC-34508),TBP	Name=148	NA	rs2233159	0.85	0.85	0.842	0.858427	0.9274	0.7927	0.9308	0.7549	0.9438	0.93	0.76	0.91	0.76	0.9067	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.422318	1.422318	NA	0.931977	0.790286	NA	0.884	NA	3.733923
1279	5	149151707	149151707	G	A	intronic	PPARGC1B	NA	NA	NA	intronic	ENSG00000155846	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs73796250	0.07	0.07	0.067	0.0922524	0.0676	0.0873	0.0403	0.0719	0.1871	0.07	0.08	0.05	0.07	0.122	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.899231	NA	NA	0.076595	0.069064	NA	0.043	NA	3.733805
1279	1	159858290	159858290	T	A	intronic	CCDC19	NA	NA	NA	intronic	ENSG00000213085	NA	NA	NA	NA	NA	1q23.2	NA	NA	NA	NA	rs3795334	0.14	0.14	0.141	0.139776	0.0835	0.0556	0.085	0.3321	0.0634	0.09	0.09	0.08	0.33	0.0948	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.181564	NA	NA	0.087907	0.300272	NA	0.246	NA	3.733793
1279	19	33106621	33106621	C	T	exonic	ANKRD27	NA	synonymous SNV	ANKRD27:NM_032139:exon22:c.G2118A:p.A706A	exonic	ENSG00000105186	NA	synonymous SNV	ENSG00000105186:ENST00000306065:exon22:c.G2118A:p.A706A	NA	NA	19q13.11	NA	NA	NA	NA	rs405858	0.5	0.5	0.494	0.480831	0.662	0.3175	0.4755	0.4365	0.5266	0.66	0.32	0.54	0.41	0.589	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.190791	NA	NA	0.681977	0.470268	NA	0.565	NA	3.7336896
1279	5	56817523	56817523	G	A	intergenic	ACTBL2,PLK2	dist=38887;dist=932287	NA	NA	ncRNA_intronic	ENSG00000250961	NA	NA	NA	NA	NA	5q11.2	NA	NA	NA	NA	rs1820124	0.25	0.25	0.265	0.25	0.2664	0.124	0.317	0.3616	0.1646	0.27	0.12	0.31	0.31	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.035168	NA	NA	NA	NA	NA	0.29	NA	3.7336
1279	7	129906915	129906915	G	A	intronic	CPA2	NA	NA	NA	intronic	ENSG00000158516	NA	NA	NA	NA	NA	7q32.2	NA	NA	NA	NA	rs7788519	0.13	0.13	0.116	0.0930511	0.2664	0.0139	0.1686	0.0098	0.0552	0.28	0.01	0.17	0.02	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.067577	NA	NA	NA	NA	NA	0.167	NA	3.7336
1279	12	64879903	64879903	A	G	intronic	TBK1	NA	NA	NA	intronic	ENSG00000183735	NA	NA	NA	NA	NA	12q14.2	NA	NA	NA	NA	rs7487627	0.36	0.36	0.343	0.386581	0.2664	0.5853	0.3775	0.3608	0.3466	0.26	0.53	0.34	0.33	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.784945	1.784945	NA	NA	NA	NA	0.283	NA	3.7336
1279	15	31746320	31746320	T	C	intergenic	KLF13,OTUD7A	dist=76218;dist=29009	NA	NA	ncRNA_exonic	ENSG00000259696	NA	NA	NA	NA	NA	15q13.3	NA	NA	NA	NA	rs12102124	0.32	0.32	0.247	0.406749	0.2664	0.2232	0.3545	0.6702	0.4213	0.24	0.18	0.33	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.40777	NA	NA	NA	NA	NA	0.283	NA	3.7336
1279	15	92824927	92824927	G	C	intergenic	SLCO3A1,ST8SIA2	dist=109262;dist=112213	NA	NA	ncRNA_exonic	ENSG00000258726	NA	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs11074058	0.2	0.2	0.187	0.18111	0.2664	0.1161	0.2262	0.1793	0.1309	0.25	0.13	0.23	0.18	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.826044	NA	NA	NA	NA	ID=COSN165051;OCCURENCE=1(breast)	0.116	NA	3.7336
1279	20	264498	264498	A	C	intronic	C20orf96	NA	NA	NA	intronic	ENSG00000196476	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs6137055	0.24	0.24	0.213	0.194489	0.2664	0.3502	0.1988	0.0257	0.1851	0.29	0.38	0.2	0.02	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.084392	NA	NA	NA	NA	NA	0.152	NA	3.7336
1279	11	60689445	60689445	T	C	exonic	TMEM109	NA	synonymous SNV	TMEM109:NM_024092:exon4:c.T540C:p.P180P	exonic	ENSG00000110108	NA	synonymous SNV	ENSG00000110108:ENST00000536171:exon3:c.T540C:p.P180P,ENSG00000110108:ENST00000227525:exon4:c.T540C:p.P180P,ENSG00000110108:ENST00000540407:exon4:c.T306C:p.P102P	NA	NA	11q12.2	NA	NA	NA	NA	rs555835	0.69	0.69	0.678	0.740815	0.6103	0.9534	0.7363	0.5756	0.8824	0.6	0.93	0.69	0.56	0.6908	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.708233	NA	NA	0.632589	0.562869	NA	0.659	NA	3.7329776
1279	1	227172935	227172935	C	G	intronic	ADCK3	NA	NA	NA	intronic	ENSG00000163050	NA	NA	NA	NA	NA	1q42.13	NA	NA	Name=4	NA	rs2297416	0.29	0.29	0.306	0.265176	0.4414	0.1577	0.2839	0.2572	0.1922	0.44	0.15	0.31	0.23	0.3631	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.062095	NA	NA	0.462558	0.273718	NA	0.355	NA	3.732942
1279	11	89486848	89486848	C	G	intergenic	TRIM77,TRIM49	dist=35808;dist=43975	NA	NA	ncRNA_exonic	ENSG00000234376	NA	NA	NA	NA	NA	11q14.3	NA	NA	NA	NA	rs11018769	NA	NA	0.115	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.1516	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.796429	NA	0.01	0.115564	0.033758	NA	0.051	NA	3.732836
1279	1	109445706	109445706	T	G	intronic	GPSM2	NA	NA	NA	intronic	ENSG00000121957,ENSG00000162641	NA	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	rs9662782	0.07	0.07	0.059	0.0708866	0.0835	0.0129	0.0476	0.1082	0.0838	0.09	0.01	0.06	0.1	0.0882	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.960815	2.960815	NA	0.095465	0.117113	NA	0.043	NA	3.732835
1279	2	233422390	233422390	G	A	intronic	EIF4E2	NA	NA	NA	intronic	ENSG00000135930	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs1190439	0.33	0.33	0.317	0.326278	0.2674	0.2847	0.4222	0.4138	0.2434	0.26	0.3	0.41	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.64949	NA	NA	NA	NA	NA	0.319	NA	3.7326
1279	4	74363282	74363282	T	C	intronic	AFM	NA	NA	NA	intronic	ENSG00000079557	NA	NA	NA	NA	NA	4q13.3	NA	NA	NA	NA	rs1158101	0.26	0.26	0.23	0.255591	0.2674	0.3234	0.3646	0.1074	0.2965	0.27	0.34	0.33	0.1	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.257722	NA	NA	NA	NA	NA	0.304	NA	3.7326
1279	10	72306967	72306967	C	T	intronic	PALD1	NA	NA	NA	intronic	ENSG00000107719	NA	NA	NA	NA	NA	10q22.1	NA	NA	NA	NA	rs3824764	0.32	0.32	0.28	0.288339	0.2674	0.2877	0.2882	0.3858	0.1789	0.28	0.33	0.27	0.38	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.901319	NA	NA	NA	NA	NA	0.21	NA	3.7326
1279	10	72306978	72306978	C	A	intronic	PALD1	NA	NA	NA	intronic	ENSG00000107719	NA	NA	NA	NA	NA	10q22.1	NA	NA	NA	NA	rs3824763	0.32	0.32	0.274	0.288339	0.2674	0.2877	0.2882	0.3858	0.1789	0.28	0.33	0.27	0.38	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.190614	NA	NA	NA	NA	NA	0.203	NA	3.7326
1279	17	27835211	27835211	A	C	intronic	TAOK1	NA	NA	NA	intronic	ENSG00000160551	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs622096	0.16	0.16	0.127	0.130192	0.2674	0.0238	0.2709	0.0151	0.1544	0.29	0.03	0.27	0.03	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.732837	NA	NA	NA	NA	NA	0.051	NA	3.7326
1279	19	45769386	45769386	G	C	intronic	MARK4	NA	NA	NA	intronic	ENSG00000007047	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs2240671	0.19	0.19	0.181	0.169329	0.2674	0.1012	0.1571	0.171	0.1452	0.28	0.1	0.2	0.14	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.797975	NA	NA	NA	NA	NA	0.123	NA	3.7326
1279	8	133961011	133961011	T	C	intronic	TG	NA	NA	NA	intronic	ENSG00000042832	NA	NA	NA	NA	NA	8q24.22	NA	NA	NA	NA	rs4736614	0.06	0.06	0.053	0.071885	0.0805	0.0407	0.0965	0.0265	0.1391	0.07	0.03	0.11	0.04	0.0849	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.351838	NA	NA	0.102558	0.029732	NA	0.043	NA	3.732042
1279	19	54755978	54755978	C	G	intronic	LILRB5	NA	NA	NA	intronic	ENSG00000105609	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs45600235	0.08	0.08	0.049	0.0698882	0.0875	0.0843	0.1614	0.0303	0.0256	0.09	0.09	0.12	0.04	0.0894	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.910106	NA	NA	0.091395	0.02837	NA	0.051	NA	3.731705
1279	15	65054533	65054533	C	T	intronic	RBPMS2	NA	NA	NA	intronic	ENSG00000166831	NA	NA	NA	NA	NA	15q22.31	NA	NA	NA	NA	rs72744744	0.17	0.17	0.136	0.164137	0.2684	0.0774	0.3703	0.0204	0.1943	0.26	0.09	0.33	0.02	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.159849	NA	NA	NA	NA	NA	0.145	NA	3.7316
1279	17	61901880	61901880	G	C	intronic	FTSJ3	NA	NA	NA	intronic	ENSG00000108592	NA	NA	NA	NA	NA	17q23.3	NA	NA	NA	NA	rs752621	0.2	0.2	0.187	0.183107	0.2684	0.0506	0.196	0.236	0.1513	0.27	0.05	0.19	0.26	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.459661	NA	NA	NA	NA	ID=COSN165498;OCCURENCE=1(breast)	0.159	NA	3.7316
1279	6	143074700	143074700	T	C	exonic	HIVEP2	NA	synonymous SNV	HIVEP2:NM_006734:exon10:c.A6885G:p.P2295P	exonic	ENSG00000010818	NA	synonymous SNV	ENSG00000010818:ENST00000012134:exon8:c.A6885G:p.P2295P,ENSG00000010818:ENST00000367604:exon9:c.A6885G:p.P2295P,ENSG00000010818:ENST00000367603:exon10:c.A6885G:p.P2295P	NA	NA	6q24.2	NA	NA	NA	NA	rs169098	0.75	0.75	0.748	0.769968	0.6074	0.8313	0.7176	0.8669	0.7802	0.62	0.84	0.7	0.87	0.6891	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.028333	NA	NA	0.638697	0.832593	NA	0.732	NA	3.7314696
1279	14	93685097	93685097	C	T	intronic	UBR7	NA	NA	NA	intronic	ENSG00000012963	NA	NA	NA	NA	NA	14q32.12	NA	NA	NA	NA	rs17128941	0.1	0.1	0.107	0.113219	0.0805	0.1002	0.1196	0.1437	0.1145	0.08	0.09	0.1	0.14	0.1043	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.570553	NA	NA	0.084186	0.144868	NA	0.174	NA	3.731014
1279	1	156246792	156246792	C	T	intronic	SMG5	NA	NA	NA	intronic	ENSG00000198952	NA	NA	NA	NA	NA	1q22	NA	NA	NA	NA	rs2277870	0.21	0.21	0.198	0.205871	0.2694	0.2272	0.2781	0.0908	0.2229	0.27	0.24	0.23	0.09	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.441494	1.441494	NA	NA	NA	NA	0.21	NA	3.7306
1279	7	38500782	38500782	G	A	intronic	AMPH	NA	NA	NA	intronic	ENSG00000078053	NA	NA	NA	NA	NA	7p14.1	NA	NA	NA	NA	rs12670885	0.33	0.33	0.302	0.370807	0.2694	0.5784	0.4294	0.1634	0.5	0.26	0.54	0.4	0.16	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.618302	NA	NA	NA	NA	NA	0.239	NA	3.7306
1279	11	76795839	76795839	A	G	intronic	CAPN5	NA	NA	NA	intronic	ENSG00000149260	NA	NA	NA	NA	NA	11q13.5	NA	NA	NA	NA	rs12362168	0.41	0.41	0.391	0.414736	0.2694	0.5317	0.2968	0.525	0.3783	0.27	0.51	0.33	0.55	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.114169	NA	NA	NA	NA	NA	0.399	NA	3.7306
1279	19	51957677	51957677	C	T	intronic	SIGLEC8	NA	NA	NA	intronic	ENSG00000105366	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs10408249	0.33	0.33	0.33	0.325479	0.2694	0.2341	0.2478	0.5454	0.2352	0.29	0.24	0.29	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.570234	NA	NA	NA	NA	NA	0.341	NA	3.7306
1279	7	148312520	148312520	T	C	UTR3	C7orf33	NM_145304:c.*27T>C	NA	NA	UTR3	ENSG00000170279	ENST00000307003:c.*27T>C	NA	NA	NA	NA	7q36.1	NA	Name=TCF4	NA	NA	rs6962292	0.58	0.58	0.573	0.608626	0.5189	0.5813	0.598	0.6573	0.6708	0.54	0.59	0.59	0.65	0.5663	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.135532	NA	NA	0.517674	0.652292	NA	0.536	NA	3.7304594
1279	14	55255673	55255673	C	T	UTR3	SAMD4A	NM_001161576:c.*11C>T,NM_015589:c.*11C>T,NM_001161577:c.*11C>T	NA	NA	UTR3	ENSG00000020577	ENST00000554335:c.*11C>T,ENST00000251091:c.*11C>T,ENST00000392067:c.*11C>T,ENST00000357634:c.*11C>T,ENST00000555192:c.*11C>T	NA	NA	Score=417;Name=lod=66	NA	14q22.2	NA	NA	NA	NA	rs11431	0.59	0.59	0.623	0.576078	0.5179	0.6528	0.5029	0.7148	0.4213	0.53	0.63	0.52	0.71	0.5314	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.373493	4.373493	NA	0.553605	0.699047	NA	0.725	NA	3.7304284
1279	8	27667793	27667793	C	T	UTR3	PBK	NM_018492:c.*29G>A	NA	NA	UTR3	ENSG00000168078	ENST00000301905:c.*29G>A,ENST00000522944:c.*29G>A	NA	NA	NA	NA	8p21.1	NA	NA	NA	NA	rs1052873	0.12	0.12	0.104	0.105831	0.2197	0.0069	0.2291	0.0098	0.1329	0.22	0.01	0.23	0.02	0.1764	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.049046	NA	NA	0.20686	0.04335	NA	0.13	NA	3.7303734
1279	16	1395420	1395420	C	T	intronic	BAIAP3	NA	NA	NA	intronic	ENSG00000007516	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs112377811	0.06	0.06	0.071	0.0603035	0.0964	0.006	0.0548	0.0756	0.0624	0.1	NA	0.06	0.07	0.0926	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.317947	NA	NA	0.080993	0.065559	NA	0.101	NA	3.730007
1279	1	92262874	92262874	T	C	exonic	TGFBR3	NA	synonymous SNV	TGFBR3:NM_001195683:exon3:c.A216G:p.A72A,TGFBR3:NM_003243:exon3:c.A216G:p.A72A,TGFBR3:NM_001195684:exon4:c.A216G:p.A72A	exonic	ENSG00000069702	NA	synonymous SNV	ENSG00000069702:ENST00000525962:exon2:c.A216G:p.A72A,ENSG00000069702:ENST00000533089:exon2:c.A216G:p.A72A,ENSG00000069702:ENST00000212355:exon3:c.A216G:p.A72A,ENSG00000069702:ENST00000465892:exon3:c.A216G:p.A72A,ENSG00000069702:ENST00000370399:exon4:c.A216G:p.A72A	NA	NA	1p22.1	NA	NA	NA	NA	rs2810904	0.72	0.72	0.712	0.715256	0.6322	0.7748	0.7176	0.7761	0.6554	0.65	0.79	0.7	0.78	0.6631	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.72187	NA	NA	0.641628	0.750794	NA	0.754	NA	3.7297386
1279	1	9079154	9079154	C	T	intronic	SLC2A7	NA	NA	NA	intronic	ENSG00000197241	NA	NA	NA	NA	NA	1p36.23	NA	NA	NA	NA	rs12031065	0.4	0.4	0.411	0.396965	0.2704	0.4087	0.4741	0.528	0.2832	0.28	0.42	0.46	0.52	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.45179	NA	NA	NA	NA	NA	0.514	NA	3.7296
1279	1	207871320	207871320	G	C	intronic	CR1L	NA	NA	NA	intronic	ENSG00000197721	NA	NA	NA	NA	NA	1q32.2	NA	NA	NA	NA	rs45575738	0.15	0.15	NA	0.129393	0.2704	0.0407	0.1484	0.0605	0.1554	0.27	0.06	0.18	0.05	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.072376	NA	NA	NA	NA	NA	0.007	NA	3.7296
1279	3	13522973	13522973	C	T	intronic	HDAC11	NA	NA	NA	intronic	ENSG00000163517	NA	NA	NA	NA	NA	3p25.1	NA	NA	NA	NA	rs2675232	0.12	0.12	0.11	0.0988419	0.2704	0.001	0.1527	0.0386	0.0665	0.24	0.0017	0.17	0.04	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.383228	NA	NA	NA	NA	NA	0.348	NA	3.7296
1279	3	119102250	119102250	G	A	intronic	ARHGAP31	NA	NA	NA	intronic	ENSG00000031081	NA	NA	NA	NA	NA	3q13.33	NA	NA	NA	NA	rs2077599	0.29	0.29	0.278	0.278954	0.2704	0.377	0.1844	0.2784	0.2546	0.28	0.36	0.22	0.26	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.431147	NA	NA	NA	NA	NA	0.203	NA	3.7296
1279	4	10080462	10080462	A	C	intronic	WDR1	NA	NA	NA	intronic	ENSG00000071127	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs2241469	0.27	0.27	0.254	0.290136	0.2704	0.3502	0.2291	0.1543	0.4755	0.29	0.38	0.2	0.18	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.412964	NA	NA	NA	NA	ID=COSN167161;OCCURENCE=2(large_intestine)	0.268	NA	3.7296
1279	4	56884079	56884079	T	C	intronic	CEP135	NA	NA	NA	intronic	ENSG00000174799	NA	NA	NA	NA	NA	4q12	NA	NA	NA	NA	rs11934142	0.16	0.16	0.182	0.136182	0.2704	0.0952	0.1182	0.0734	0.138	0.28	0.12	0.12	0.07	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.432551	1.432551	NA	NA	NA	NA	0.138	NA	3.7296
1279	17	53038082	53038082	G	A	intronic	TOM1L1	NA	NA	NA	intronic	ENSG00000141198,ENSG00000166260	NA	NA	NA	NA	NA	17q22	NA	NA	NA	NA	rs2287136	0.24	0.24	0.247	0.26258	0.2704	0.1052	0.2262	0.3563	0.316	0.27	0.09	0.26	0.37	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.024289	NA	NA	NA	NA	NA	0.312	NA	3.7296
1279	21	45674629	45674629	G	A	intronic	DNMT3L	NA	NA	NA	intronic	ENSG00000142182	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs55831401	0.05	0.05	0.044	0.0359425	0.1083	NA	0.062	0.003	0.0245	0.12	NA	0.06	0.002	0.0683	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.002605	NA	NA	0.093859	0.015441	NA	0.116	NA	3.729541
1279	1	109466858	109466858	G	A	intronic	GPSM2	NA	NA	NA	exonic	ENSG00000121957	NA	unknown	UNKNOWN	NA	NA	1p13.3	NA	NA	NA	NA	rs705268	0.26	0.26	0.289	0.270367	0.2465	0.0159	0.1542	0.6135	0.1759	0.25	0.01	0.19	0.6	0.2824	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.33706	1.33706	NA	0.241628	0.553563	NA	0.217	NA	3.729472
1279	19	46029187	46029187	T	C	intronic	VASP	NA	NA	NA	intronic	ENSG00000125753	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs56216986	0.1	0.1	0.09	0.0966454	0.0855	0.1518	0.0562	0.0461	0.1483	0.1	0.13	0.08	0.06	0.0951	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.258262	NA	NA	0.090465	0.054471	NA	0.065	NA	3.728935
1279	8	39496029	39496029	T	C	exonic	ADAM18	NA	synonymous SNV	ADAM18:NM_014237:exon10:c.T873C:p.T291T	exonic	ENSG00000168619	NA	synonymous SNV	ENSG00000168619:ENST00000379866:exon9:c.T801C:p.T267T,ENSG00000168619:ENST00000265707:exon10:c.T873C:p.T291T	NA	NA	8p11.22	NA	NA	NA	NA	rs12708194	0.56	0.56	0.569	0.588458	0.6431	0.251	0.5994	0.736	0.6728	0.65	0.27	0.61	0.71	0.6271	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.462134	NA	NA	0.667559	0.746482	NA	0.616	NA	3.7289076
1279	13	20224138	20224138	G	A	intronic	MPHOSPH8	NA	NA	NA	intronic	ENSG00000196199	NA	NA	NA	NA	NA	13q12.11	NA	NA	NA	NA	rs9579581	0.1	0.1	0.093	0.106629	0.0974	0.0754	0.0735	0.1974	0.0491	0.09	0.06	0.06	0.2	0.102	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.881242	NA	NA	0.071695	0.165136	NA	0.174	NA	3.728905
1279	21	47845936	47845936	T	C	intronic	PCNT	NA	NA	NA	intronic	ENSG00000160299	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs2330435	0.16	0.16	0.143	0.178714	0.0924	0.004	0.0937	0.4871	0.091	0.09	0.0035	0.1	0.47	0.1029	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.194222	NA	NA	0.075814	0.432819	NA	0.196	NA	3.728886
1279	19	39879663	39879663	A	G	intronic	PAF1	NA	NA	NA	intronic	ENSG00000006712	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs40353	0.23	0.23	0.267	0.25599	0.0785	0.0853	0.1023	0.739	0.0706	0.08	0.09	0.12	0.72	0.1225	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.300808	NA	NA	0.070116	0.655924	NA	0.37	NA	3.728884
1279	22	50506810	50506810	A	G	intronic	MLC1	NA	NA	NA	intronic	ENSG00000100427	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs5771349	0.11	0.11	0.089	0.131789	0.1332	0.0923	0.1758	0.059	0.2382	0.13	0.1	0.16	0.08	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.859653	NA	NA	0.138122	0.078196	NA	0.072	NA	3.728678
1279	13	99356612	99356612	A	G	exonic	SLC15A1	NA	synonymous SNV	SLC15A1:NM_005073:exon17:c.T1347C:p.A449A	exonic	ENSG00000088386	NA	synonymous SNV	ENSG00000088386:ENST00000376503:exon17:c.T1347C:p.A449A	NA	NA	13q32.3	NA	NA	NA	NA	rs1339067	0.59	0.59	0.573	0.633187	0.6342	0.3433	0.7349	0.8578	0.5552	0.63	0.28	0.69	0.84	0.642	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.189257	NA	NA	0.66186	0.815706	NA	0.638	NA	3.7286066
1279	1	162313518	162313518	A	G	intronic	NOS1AP	NA	NA	NA	intronic	ENSG00000198929	NA	NA	NA	NA	NA	1q23.3	NA	NA	NA	NA	rs3751285	0.36	0.36	0.343	0.354433	0.2714	0.5556	0.3934	0.2769	0.3098	0.28	0.55	0.33	0.29	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.355309	NA	NA	NA	NA	NA	0.333	NA	3.7286
1279	1	212619009	212619009	C	A	intronic	NENF	NA	NA	NA	intronic	ENSG00000117691	NA	NA	NA	NA	NA	1q32.3	NA	NA	NA	NA	rs2282435	0.22	0.22	0.191	0.19988	0.2714	0.1399	0.1873	0.2383	0.1452	0.28	0.13	0.23	0.21	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.585761	NA	NA	NA	NA	NA	0.159	NA	3.7286
1279	2	68620463	68620463	G	A	intronic	PLEK	NA	NA	NA	intronic	ENSG00000115956	NA	NA	NA	NA	NA	2p13.3	NA	NA	NA	NA	rs2289688	0.43	0.43	0.409	0.45627	0.2714	0.6855	0.4207	0.4017	0.5092	0.28	0.66	0.41	0.4	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.218093	NA	NA	NA	NA	NA	0.341	NA	3.7286
1279	7	158902425	158902425	T	C	intronic	VIPR2	NA	NA	NA	intronic	ENSG00000106018	NA	NA	NA	NA	NA	7q36.3	NA	NA	NA	NA	rs3793232	0.35	0.35	0.354	0.35623	0.2714	0.2183	0.2464	0.6793	0.227	0.27	0.24	0.26	0.67	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.1785	2.1785	NA	NA	NA	NA	0.471	NA	3.7286
1279	10	129911919	129911919	T	A	intronic	MKI67	NA	NA	NA	intronic	ENSG00000148773	NA	NA	NA	NA	NA	10q26.2	NA	NA	NA	NA	rs12255393	0.2	0.2	0.188	0.180511	0.2714	0.119	0.3112	0.0787	0.1953	0.26	0.15	0.33	0.06	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.28715	NA	NA	NA	NA	ID=COSN163832;OCCURENCE=1(breast)	0.138	NA	3.7286
1279	21	47847757	47847757	G	A	intronic	PCNT	NA	NA	NA	intronic	ENSG00000160299	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs55937012	0.16	0.16	0.164	0.178115	0.0924	0.004	0.0937	0.4871	0.0879	0.1	0.0035	0.1	0.47	0.103	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.380159	NA	NA	0.076047	0.430549	NA	0.196	NA	3.728553
1279	6	145162001	145162001	A	G	intronic	UTRN	NA	NA	NA	intronic	ENSG00000152818	NA	NA	NA	NA	NA	6q24.2	NA	NA	Name=7	NA	rs4895657	0.71	0.71	0.721	0.738818	0.3668	0.9514	0.6772	0.9818	0.6176	0.37	0.97	0.63	0.97	0.5249	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.232723	NA	NA	0.380233	0.879709	NA	0.609	NA	3.728067
1279	10	49654342	49654342	C	T	UTR3	ARHGAP22	NM_001256026:c.*92G>A,NM_001256025:c.*92G>A,NM_001256024:c.*92G>A,NM_021226:c.*92G>A	NA	NA	UTR3	ENSG00000128805	ENST00000249601:c.*92G>A,ENST00000374172:c.*92G>A,ENST00000374170:c.*92G>A,ENST00000477708:c.*92G>A,ENST00000417247:c.*92G>A,ENST00000435790:c.*92G>A	NA	NA	NA	NA	10q11.22	NA	NA	NA	NA	rs1051508	0.54	0.54	0.531	0.478435	0.6054	0.628	0.4856	0.3336	0.3845	0.61	0.64	0.53	0.32	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.164834	NA	NA	NA	NA	NA	0.58	NA	3.7279334
1279	7	129663259	129663259	C	T	intronic	ZC3HC1	NA	NA	NA	ncRNA_intronic	ENSG00000244036	NA	NA	NA	NA	NA	7q32.2	NA	NA	NA	NA	rs11762946	0.5	0.5	0.487	0.471645	0.6054	0.6667	0.562	0.0915	0.5828	0.6	0.69	0.5	0.1	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.392806	NA	NA	NA	NA	NA	0.355	NA	3.7279333
1279	17	10357281	10357281	T	G	intronic	MYH4	NA	NA	NA	ncRNA_intronic	ENSG00000214970	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs3826444	0.34	0.34	0.319	0.294529	0.6054	0.1359	0.4207	0.1006	0.3108	0.61	0.13	0.43	0.12	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.675069	NA	NA	NA	NA	NA	0.29	NA	3.7279333
1279	3	132107365	132107365	T	A	intergenic	ACPP,DNAJC13	dist=20219;dist=29188	NA	NA	ncRNA_exonic	ENSG00000240890	NA	NA	NA	NA	NA	3q22.1	NA	NA	NA	NA	rs9828489	0.26	0.26	0.241	0.247604	0.2724	0.2867	0.2911	0.1505	0.2822	0.28	0.28	0.27	0.21	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.421081	NA	NA	NA	NA	NA	0.355	NA	3.7276
1279	1	46812519	46812519	A	G	intronic	NSUN4	NA	NA	NA	intronic	ENSG00000117481	NA	NA	NA	NA	NA	1p33	NA	NA	NA	NA	rs17361791	0.16	0.16	0.15	0.131789	0.2724	0.0179	0.147	0.1331	0.092	0.27	0.02	0.17	0.14	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.444367	NA	NA	NA	NA	NA	0.217	NA	3.7276
1279	1	46818219	46818219	T	G	intronic	NSUN4	NA	NA	NA	intronic	ENSG00000117481	NA	NA	NA	NA	NA	1p33	NA	NA	NA	NA	rs72677591	0.16	0.16	0.154	0.131789	0.2724	0.0179	0.147	0.1331	0.092	0.27	0.02	0.17	0.13	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.858857	NA	NA	NA	NA	NA	0.217	NA	3.7276
1279	1	46818416	46818416	A	C	intronic	NSUN4	NA	NA	NA	intronic	ENSG00000117481	NA	NA	NA	NA	NA	1p33	NA	NA	NA	NA	rs17413694	0.14	0.14	0.128	0.131789	0.2724	0.0179	0.147	0.1331	0.092	0.24	0.02	0.16	0.12	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.359972	NA	NA	NA	NA	NA	NA	NA	3.7276
1279	1	46818417	46818417	T	C	intronic	NSUN4	NA	NA	NA	intronic	ENSG00000117481	NA	NA	NA	NA	NA	1p33	NA	NA	NA	NA	rs77185326	0.14	0.14	0.124	0.131789	0.2724	0.0179	0.147	0.1331	0.092	0.24	0.02	0.16	0.12	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.86165	NA	NA	NA	NA	NA	NA	NA	3.7276
1279	1	46818442	46818442	G	A	intronic	NSUN4	NA	NA	NA	intronic	ENSG00000117481	NA	NA	NA	NA	NA	1p33	NA	NA	NA	NA	rs41294478	0.16	0.16	0.15	0.131789	0.2724	0.0179	0.147	0.1331	0.092	0.27	0.02	0.17	0.14	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.147416	NA	NA	NA	NA	NA	0.217	NA	3.7276
1279	1	46818452	46818452	A	G	intronic	NSUN4	NA	NA	NA	intronic	ENSG00000117481	NA	NA	NA	NA	NA	1p33	NA	NA	NA	NA	rs17413701	0.16	0.16	0.15	0.131789	0.2724	0.0179	0.147	0.1331	0.092	0.27	0.02	0.17	0.14	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.370029	NA	NA	NA	NA	NA	0.217	NA	3.7276
1279	1	46818479	46818479	C	T	intronic	NSUN4	NA	NA	NA	intronic	ENSG00000117481	NA	NA	NA	NA	NA	1p33	NA	NA	NA	NA	rs7515598	0.16	0.16	0.138	0.131789	0.2724	0.0179	0.147	0.1331	0.092	0.27	0.02	0.17	0.14	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.30729	NA	NA	NA	NA	NA	0.174	NA	3.7276
1279	1	46826587	46826587	C	A	intronic	NSUN4	NA	NA	NA	intronic	ENSG00000117481	NA	NA	NA	NA	NA	1p33	NA	NA	NA	NA	rs55887761	0.16	0.16	0.165	0.131789	0.2724	0.0179	0.147	0.1331	0.092	0.27	0.02	0.17	0.14	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.142096	NA	NA	NA	NA	NA	0.217	NA	3.7276
1279	1	204970243	204970243	A	G	intronic	NFASC	NA	NA	NA	intronic	ENSG00000163531	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs4950976	0.21	0.21	0.208	0.225839	0.2724	0.2391	0.183	0.1293	0.3252	0.27	0.22	0.23	0.11	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.653952	1.653952	NA	NA	NA	NA	0.29	NA	3.7276
1279	1	209796267	209796267	G	A	intronic	LAMB3	NA	NA	NA	intronic	ENSG00000196878	NA	NA	NA	NA	NA	1q32.2	NA	NA	NA	NA	rs3737913	0.31	0.31	0.283	0.296725	0.2724	0.3661	0.4121	0.2405	0.2444	0.28	0.36	0.34	0.26	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.072701	NA	NA	NA	NA	NA	0.275	NA	3.7276
1279	4	89708850	89708850	A	G	intronic	FAM13A	NA	NA	NA	intronic	ENSG00000138640	NA	NA	NA	NA	NA	4q22.1	NA	NA	NA	NA	rs11725153	0.12	0.12	0.115	0.101837	0.2724	NA	0.1383	0.0076	0.1329	0.26	NA	0.16	0.01	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.078866	NA	NA	NA	NA	NA	0.116	NA	3.7276
1279	5	35861152	35861152	C	G	intronic	IL7R	NA	NA	NA	intronic	ENSG00000168685	NA	NA	NA	NA	NA	5p13.2	NA	NA	NA	NA	rs11567705	0.24	0.24	0.215	0.233826	0.2724	0.2351	0.1931	0.205	0.2607	0.28	0.23	0.21	0.21	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.459116	NA	NA	NA	NA	ID=COSN167435;OCCURENCE=1(large_intestine)	0.268	NA	3.7276
1279	15	79071961	79071961	C	T	intronic	ADAMTS7	NA	NA	NA	intronic	ENSG00000136378	NA	NA	NA	NA	NA	15q25.1	NA	NA	NA	NA	rs59697303	0.31	0.31	0.283	0.335064	0.2724	0.3343	0.3343	0.3283	0.41	0.28	0.33	0.35	0.29	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.599956	NA	NA	NA	NA	NA	0.101	NA	3.7276
1279	19	6906357	6906357	C	G	intronic	EMR1	NA	NA	NA	intronic	ENSG00000174837	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs366181	0.47	0.47	0.514	0.498602	0.2724	0.4841	0.4496	0.8306	0.3323	0.26	0.51	0.41	0.8	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.635144	NA	NA	NA	NA	NA	0.5	NA	3.7276
1279	22	43471386	43471386	G	C	intronic	TTLL1	NA	NA	NA	intronic	ENSG00000100271	NA	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs2294413	0.51	0.51	0.527	0.546526	0.2724	0.8105	0.5216	0.6021	0.499	0.25	0.78	0.49	0.6	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.096758	NA	NA	NA	NA	NA	0.486	NA	3.7276
1279	2	100022772	100022772	T	C	intronic	REV1	NA	NA	NA	intronic	ENSG00000135945	NA	NA	NA	NA	NA	2q11.2	NA	Name=Pol2-4H8	NA	NA	rs717454	0.43	0.43	0.4	0.396366	0.4304	0.3115	0.6225	0.4115	0.2679	0.43	0.34	0.61	0.41	0.4276	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.581872	NA	NA	0.414884	0.412165	NA	0.42	NA	3.727116
1279	1	162766476	162766476	C	T	intronic	HSD17B7	NA	NA	NA	intronic	ENSG00000132196	NA	NA	NA	NA	NA	1q23.3	NA	Name=CEBPB	Name=5	NA	rs1780019	0.57	0.57	0.551	0.534145	0.7813	0.5645	0.5692	0.2118	0.6595	0.8	0.56	0.6	0.2	0.699	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.339554	NA	NA	0.792674	0.297776	NA	0.601	NA	3.727026
1279	20	2775872	2775872	T	C	intronic	CPXM1	NA	NA	NA	intronic	ENSG00000088882	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs41306788	0.05	0.05	0.033	0.0447284	0.0875	0.002	0.1268	0.0038	0.0419	0.1	0.0017	0.11	0.0041	0.088	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.197293	NA	NA	0.097674	0.019065	NA	0.007	NA	3.726826
1279	21	39762883	39762883	T	C	intronic	ERG	NA	NA	NA	intronic	ENSG00000157554	NA	NA	NA	NA	NA	21q22.2	NA	NA	NA	NA	rs2246468	0.1	0.1	0.073	0.0964457	0.0696	0.1359	0.2046	0.0174	0.1135	0.07	0.13	0.17	0.04	0.1071	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.394399	NA	NA	0.096512	0.029278	NA	0.087	NA	3.726788
1279	3	183756813	183756813	C	T	UTR3	HTR3D	NM_182537:c.*50C>T,NM_001145143:c.*50C>T,NM_001163646:c.*50C>T	NA	NA	UTR3	ENSG00000186090	ENST00000334128:c.*50C>T,ENST00000382489:c.*50C>T,ENST00000453435:c.*50C>T	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs6789682	0.33	0.33	0.311	0.367412	0.1839	0.4345	0.2968	0.6445	0.1626	0.18	0.4	0.22	0.57	0.2395	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.321525	NA	NA	0.183256	0.568997	NA	0.319	NA	3.7266774
1279	2	23621521	23621521	T	C	intronic	KLHL29	NA	NA	NA	intronic	ENSG00000119771	NA	NA	NA	NA	NA	2p24.1	NA	NA	NA	NA	rs7560798	0.2	0.2	0.2	0.21905	0.2734	0.122	0.196	0.1861	0.3241	0.26	0.12	0.24	0.18	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.140217	NA	NA	NA	NA	NA	0.297	NA	3.7266
1279	2	172642057	172642057	C	T	intronic	SLC25A12	NA	NA	NA	intronic	ENSG00000115840	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	rs12692973	0.28	0.28	0.27	0.264776	0.2734	0.1994	0.2349	0.3926	0.1718	0.27	0.22	0.24	0.37	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.753066	NA	NA	NA	NA	ID=COSN166336;OCCURENCE=1(breast)	0.355	NA	3.7266
1279	2	231118186	231118186	G	A	intronic	SP140	NA	NA	NA	intronic	ENSG00000079263	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs3769840	0.23	0.23	0.219	0.207668	0.2734	0.2103	0.2392	0.1641	0.1738	0.28	0.23	0.21	0.16	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.049398	NA	NA	NA	NA	NA	0.203	NA	3.7266
1279	3	53217413	53217413	A	G	intronic	PRKCD	NA	NA	NA	intronic	ENSG00000163932	NA	NA	NA	NA	NA	3p21.1	NA	NA	NA	NA	rs2306572	0.21	0.21	0.189	0.201078	0.2734	0.2063	0.2695	0.0809	0.2352	0.28	0.2	0.28	0.08	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.324459	NA	NA	NA	NA	NA	0.167	NA	3.7266
1279	6	43250387	43250387	G	C	intronic	TTBK1	NA	NA	NA	intronic	ENSG00000146216	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs6936397	0.35	0.35	0.357	0.385583	0.2734	0.2827	0.2565	0.7126	0.2566	0.26	0.26	0.26	0.67	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.03369	NA	NA	NA	NA	NA	0.326	NA	3.7266
1279	6	44057088	44057088	C	T	intergenic	C6orf223,MRPL14	dist=83394;dist=24285	NA	NA	ncRNA_exonic	ENSG00000183239	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs9472209	0.4	0.4	0.369	0.398363	0.2734	0.5228	0.3761	0.5219	0.2474	0.28	0.49	0.35	0.52	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.042529	NA	NA	NA	NA	NA	0.37	NA	3.7266
1279	10	4884800	4884800	A	G	intronic	AKR1E2	NA	NA	NA	intronic	ENSG00000165568	NA	NA	NA	NA	NA	10p15.1	NA	NA	NA	NA	rs2961592	0.22	0.22	0.212	0.205671	0.2734	0.2192	0.2118	0.1452	0.1994	0.26	0.21	0.28	0.15	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.030086	NA	NA	NA	NA	NA	0.203	NA	3.7266
1279	11	2593977	2593977	A	G	intronic	KCNQ1	NA	NA	NA	intronic	ENSG00000053918	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs4930127	0.44	0.44	0.394	0.468251	0.2734	0.6101	0.4669	0.5726	0.3824	0.28	0.61	0.41	0.53	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.17455	NA	NA	NA	NA	NA	0.529	NA	3.7266
1279	11	118240332	118240332	T	C	intronic	UBE4A	NA	NA	NA	intronic	ENSG00000110344	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs11216860	0.33	0.33	0.316	0.34984	0.2734	0.5804	0.1902	0.1755	0.5399	0.28	0.59	0.24	0.16	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.983982	NA	NA	NA	NA	NA	0.297	NA	3.7266
1279	12	6883670	6883670	G	C	intronic	LAG3	NA	NA	NA	intronic	ENSG00000089692	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs2365094	0.31	0.31	0.273	0.323682	0.2734	0.4464	0.3977	0.1936	0.3722	0.26	0.45	0.36	0.21	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.025182	NA	NA	NA	NA	NA	0.239	NA	3.7266
1279	17	560851	560851	T	C	intronic	VPS53	NA	NA	NA	intronic	ENSG00000141252	NA	NA	NA	NA	NA	17p13.3	NA	NA	NA	NA	rs2543777	0.17	0.17	0.16	0.159345	0.2734	0.0952	0.1556	0.0408	0.271	0.28	0.1	0.18	0.06	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.73832	NA	NA	NA	NA	NA	0.13	NA	3.7266
1279	19	746206	746206	C	T	intronic	PALM	NA	NA	NA	intronic	ENSG00000099864	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs2384776	0.27	0.27	0.208	0.271965	0.2734	0.1964	0.3934	0.2708	0.2638	0.28	0.18	0.38	0.26	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.19793	NA	NA	NA	NA	NA	0.203	NA	3.7266
1279	13	31903841	31903841	A	G	UTR3	B3GALTL	NM_194318:c.*36A>G	NA	NA	UTR3	ENSG00000187676	ENST00000343307:c.*36A>G	NA	NA	NA	NA	13q12.3	NA	NA	NA	NA	rs112937254	0.1	0.1	0.084	0.0730831	0.2177	0.001	0.1153	0.0076	0.0573	0.21	0.0017	0.16	0.002	0.1615	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.368495	NA	NA	0.227674	0.041534	NA	0.065	NA	3.7264594
1279	15	52903749	52903749	T	C	intronic	FAM214A	NA	NA	NA	intronic	ENSG00000047346	NA	NA	NA	NA	NA	15q21.3	NA	NA	NA	NA	rs8036671	0.07	0.07	0.071	0.0780751	0.0865	0.001	0.0706	0.1377	0.0736	0.09	NA	0.09	0.13	0.0893	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.312588	NA	NA	0.098066	0.126645	NA	0.08	NA	3.726134
1279	11	1857112	1857112	C	A	intronic	SYT8	NA	NA	NA	intronic	ENSG00000149043	NA	NA	NA	Score=340;Name=lod=32	NA	11p15.5	NA	NA	NA	NA	rs907606	0.3	0.3	0.285	0.276957	0.4384	0.2649	0.2032	0.118	0.3906	0.44	0.29	0.26	0.12	0.3875	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.225059	NA	NA	0.448011	0.15493	ID=COSM428788;OCCURENCE=1(breast)	0.341	NA	3.726089
1279	17	10400963	10400963	C	G	intronic	MYH1	NA	NA	NA	ncRNA_intronic	ENSG00000214970	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs723903	0.38	0.38	0.351	0.329073	0.6074	0.1339	0.4294	0.2322	0.3037	0.61	0.13	0.43	0.26	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.054072	NA	NA	NA	NA	NA	0.355	NA	3.7259333
1279	5	142416741	142416741	T	C	intronic	ARHGAP26	NA	NA	NA	intronic	ENSG00000145819	NA	NA	NA	NA	NA	5q31.3	NA	Name=NANOG_(SC-33759),NRSF	Name=68	NA	rs192194	0.66	0.66	0.65	0.644768	0.7913	0.3234	0.621	0.8041	0.6268	0.79	0.36	0.69	0.78	0.7071	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.92141	NA	NA	0.77593	0.786428	NA	0.732	NA	3.72567
1279	2	30682470	30682470	A	T	UTR5	LCLAT1	NM_182551:c.-9A>T	NA	NA	UTR5	ENSG00000172954	ENST00000319406:c.-9A>T,ENST00000359433:c.-9A>T,ENST00000309052:c.-9A>T,ENST00000540623:c.-65987A>T,ENST00000478015:c.-9A>T,ENST00000497423:c.-9A>T	NA	NA	NA	NA	2p23.1	NA	NA	NA	NA	rs55723517	0.1	0.1	0.092	0.0766773	0.2237	0.002	0.1427	0.0136	0.0409	0.21	0.0017	0.16	0.02	0.1546	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.581182	NA	NA	0.229419	0.051975	NA	0.13	NA	3.7256144
1279	2	220336517	220336517	C	T	intronic	SPEG	NA	NA	NA	intronic	ENSG00000072195	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs73991563	0.26	0.26	0.297	0.313698	0.2744	0.1369	0.2695	0.3964	0.456	0.27	0.15	0.28	0.36	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.731489	NA	NA	NA	NA	NA	0.239	NA	3.7256
1279	9	35722282	35722282	T	C	intronic	TLN1	NA	NA	NA	intronic	ENSG00000137076	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs2295797	0.24	0.24	0.225	0.205871	0.2744	0.3423	0.2738	0.0212	0.1963	0.26	0.38	0.28	0.02	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.618598	NA	NA	NA	NA	NA	0.188	NA	3.7256
1279	10	85936160	85936160	T	C	intronic	C10orf99	NA	NA	NA	intronic	ENSG00000188373	NA	NA	NA	NA	NA	10q23.1	NA	NA	NA	NA	rs4348833	0.19	0.19	0.163	0.164537	0.2744	0.2252	0.1801	0.0431	0.1421	0.26	0.19	0.2	0.05	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.6647	NA	NA	NA	NA	NA	0.167	NA	3.7256
1279	13	22113669	22113669	C	T	intronic	MICU2	NA	NA	NA	intronic	ENSG00000165487	NA	NA	NA	NA	NA	13q12.11	NA	NA	NA	NA	rs34005684	0.13	0.13	0.107	0.0986422	0.2744	0.002	0.1585	0.0113	0.093	0.29	0.0017	0.18	0.02	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.487814	NA	NA	NA	NA	NA	0.188	NA	3.7256
1279	16	57056064	57056064	G	T	intronic	NLRC5	NA	NA	NA	intronic	ENSG00000140853	NA	NA	NA	NA	NA	16q13	NA	NA	NA	NA	rs4784750	0.17	0.17	0.166	0.151757	0.2744	0.0536	0.2478	0.0719	0.1667	0.29	0.04	0.25	0.08	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.23332	NA	NA	NA	NA	NA	0.116	NA	3.7256
1279	19	14773022	14773022	T	C	intronic	EMR3	NA	NA	NA	intronic	ENSG00000131355	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs8102148	0.23	0.23	0.253	0.234425	0.2744	0.1498	0.1888	0.2912	0.2362	0.26	0.13	0.22	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.165013	NA	NA	NA	NA	NA	0.261	NA	3.7256
1279	5	52356701	52356701	T	G	intronic	ITGA2	NA	NA	NA	intronic	ENSG00000164171	NA	NA	NA	NA	NA	5q11.2	NA	NA	NA	NA	rs3212539	0.1	0.1	0.117	0.106829	0.0895	0.0317	0.0663	0.2035	0.1002	0.09	0.03	0.06	0.25	0.0892	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.442827	NA	NA	0.095953	0.182705	NA	0.109	NA	3.725347
1279	5	52382748	52382748	A	T	intronic	ITGA2	NA	NA	NA	intronic	ENSG00000164171	NA	NA	NA	NA	NA	5q11.2	NA	NA	NA	NA	rs3212635	0.11	0.11	0.109	0.104233	0.0885	0.0298	0.0677	0.2035	0.089	0.09	0.03	0.06	0.26	0.0899	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.540264	NA	NA	0.096279	0.180663	NA	0.109	NA	3.725321
1279	16	29982961	29982961	C	T	intronic	TMEM219	NA	NA	NA	UTR3	ENSG00000149932	ENST00000561899:c.*95C>T	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs9932702	0.38	0.38	0.376	0.405351	0.4414	0.377	0.3372	0.3578	0.5102	0.44	0.36	0.36	0.34	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.209193	2.209193	NA	NA	NA	NA	0.391	NA	3.7252667
1279	19	6990702	6990702	A	G	ncRNA_intronic	EMR4P	NA	NA	NA	ncRNA_intronic	ENSG00000268758	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs12972391	0.45	0.45	0.433	0.465056	0.4851	0.5288	0.5029	0.351	0.5061	0.47	0.43	0.53	0.37	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.48904	NA	NA	0.456317	0.370665	NA	0.449	NA	3.7252496
1280	11	93466866	93466866	G	T	ncRNA_exonic	MIR1304	NA	NA	NA	ncRNA_exonic	ENSG00000221170	NA	NA	NA	NA	NA	11q21	NA	Name=Pol2(b),Pol2-4H8	Name=22	NA	rs2155248	0.89	0.89	0.885	0.879193	0.9901	0.9385	0.9438	0.6346	0.9888	0.99	0.93	0.95	0.64	0.9601	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.152329	NA	NA	0.991704	0.698513	NA	0.841	NA	3.7247626
1280	1	216824505	216824505	C	G	intronic	ESRRG	NA	NA	NA	intronic	ENSG00000196482	NA	NA	NA	NA	NA	1q41	NA	NA	NA	NA	rs10863261	0.16	0.16	0.15	0.133586	0.2753	0.0774	0.2003	0.0083	0.1677	0.29	0.1	0.2	0.01	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.572265	NA	NA	NA	NA	NA	0.152	NA	3.7247
1280	2	11777757	11777757	T	C	intronic	GREB1	NA	NA	NA	intronic	ENSG00000196208	NA	NA	NA	NA	NA	2p25.1	NA	NA	NA	NA	rs3749064	0.28	0.28	0.256	0.273562	0.2753	0.4087	0.2392	0.1293	0.3517	0.28	0.42	0.27	0.14	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.037646	NA	NA	NA	NA	NA	0.232	NA	3.7247
1280	9	127643946	127643946	A	G	intronic	GOLGA1	NA	NA	NA	intronic	ENSG00000136935	NA	NA	NA	NA	NA	9q33.3	NA	NA	NA	NA	rs2304957	0.17	0.17	0.162	0.158546	0.2753	0.1101	0.1153	0.0908	0.2106	0.28	0.11	0.12	0.11	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.449115	NA	NA	NA	NA	NA	0.13	NA	3.7247
1280	20	47632754	47632754	A	G	intronic	ARFGEF2	NA	NA	NA	intronic	ENSG00000124198	NA	NA	NA	NA	NA	20q13.13	NA	NA	NA	NA	rs1473718	0.31	0.31	0.276	0.292133	0.2753	0.4812	0.3602	0.0787	0.3548	0.27	0.51	0.33	0.12	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.41729	NA	NA	NA	NA	ID=COSN166563;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.384	NA	3.7247
1280	7	133984878	133984878	G	A	intronic	SLC35B4	NA	NA	NA	intronic	ENSG00000205060	NA	NA	NA	NA	NA	7q33	NA	NA	Name=10	NA	rs34664116	0.29	0.29	0.256	0.305911	0.4374	0.122	0.5	0.0908	0.5133	0.45	0.12	0.47	0.09	0.398	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.212074	NA	NA	0.440581	0.156832	ID=COSN168202;OCCURENCE=1(large_intestine)	0.254	NA	3.724019
1280	1	92200634	92200634	C	T	intronic	TGFBR3	NA	NA	NA	intronic	ENSG00000069702	NA	NA	NA	NA	NA	1p22.1	NA	NA	NA	NA	rs11165377	0.23	0.23	0.21	0.216254	0.2763	0.2857	0.1888	0.1324	0.2157	0.28	0.25	0.22	0.16	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.353575	NA	NA	NA	NA	NA	0.174	NA	3.7237
1280	7	5262151	5262151	C	T	intronic	WIPI2	NA	NA	NA	intronic	ENSG00000157954	NA	NA	NA	NA	NA	7p22.1	NA	NA	NA	NA	rs62441068	0.31	0.31	0.274	0.324681	0.2763	0.2401	0.5043	0.3116	0.3517	0.28	0.27	0.46	0.28	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.925861	NA	NA	NA	NA	NA	0.283	NA	3.7237
1280	9	84564152	84564152	C	T	UTR3	SPATA31D3	NM_207416:c.*1230C>T	NA	NA	ncRNA_exonic	ENSG00000186788	NA	NA	NA	NA	NA	9q21.32	NA	NA	NA	NA	rs641486	0.89	0.89	0.897	0.915535	0.7763	0.999	0.879	0.9864	0.9029	0.77	1	0.86	0.98	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.31743	NA	NA	NA	NA	NA	0.899	NA	3.7237
1280	10	3147456	3147456	C	T	intronic	PFKP	NA	NA	NA	intronic	ENSG00000067057	NA	NA	NA	NA	NA	10p15.2	NA	NA	NA	NA	rs4271292	0.32	0.32	0.278	0.330072	0.2763	0.495	0.3372	0.2179	0.362	0.26	0.51	0.28	0.22	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.515305	NA	NA	NA	NA	NA	0.174	NA	3.7237
1280	13	52483094	52483094	T	C	intergenic	CCDC70,ATP7B	dist=42722;dist=23712	NA	NA	ncRNA_exonic	ENSG00000232872	NA	NA	NA	NA	NA	13q14.3	NA	NA	NA	NA	rs4943039	0.3	0.3	0.234	0.311701	0.2763	0.4921	0.3112	0.2322	0.2699	0.23	0.5	0.27	0.19	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.493354	NA	NA	NA	NA	NA	0.188	NA	3.7237
1280	19	43860048	43860048	G	T	intronic	CD177	NA	NA	NA	intronic	ENSG00000204936	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs2286403	0.31	0.31	0.28	0.380591	0.2763	0.6667	0.3401	0.211	0.4509	0.2	0.58	0.29	0.18	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.351025	NA	NA	NA	NA	NA	0.333	NA	3.7237
1280	20	58559654	58559654	C	A	intronic	CDH26	NA	NA	NA	intronic	ENSG00000124215	NA	NA	NA	NA	NA	20q13.33	NA	NA	NA	NA	rs1474909	0.05	0.05	0.055	0.0541134	0.0954	0.0149	0.0562	0.003	0.1196	0.1	0.01	0.08	0.0041	0.0861	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.207662	NA	NA	0.094822	0.019028	NA	0.051	NA	3.723678
1280	19	54756221	54756221	T	C	intronic	LILRB5	NA	NA	NA	intronic	ENSG00000105609	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs3843753	0.1	0.1	0.078	0.0930511	0.0865	0.0843	0.1686	0.115	0.0256	0.09	0.09	0.12	0.13	0.0974	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.7051	NA	NA	0.092442	0.109396	NA	0.087	NA	3.723658
1280	11	18741847	18741847	G	C	intronic	IGSF22	NA	NA	NA	ncRNA_intronic	ENSG00000254966	NA	NA	NA	NA	NA	11p15.1	NA	NA	NA	NA	rs11024770	0.19	0.19	0.165	0.171526	0.2048	0.1944	0.3084	0.0779	0.1431	0.22	0.18	0.28	0.1	0.211	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.729598	1.729598	NA	0.194005	0.086457	NA	0.145	NA	3.7235283
1280	9	79888146	79888146	G	A	intronic	VPS13A	NA	NA	NA	intronic	ENSG00000197969	NA	NA	NA	NA	NA	9q21.2	NA	NA	NA	NA	rs17063468	0.09	0.09	0.081	0.0726837	0.0954	0.122	0.0576	0.0356	0.0593	0.1	0.13	0.05	0.05	0.0914	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.199201	NA	NA	0.08969	0.053808	NA	0.051	NA	3.72351
1280	20	43566863	43566863	G	A	intronic	PABPC1L	NA	NA	NA	intronic	ENSG00000101104	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs2273357	0.11	0.11	0.094	0.0964457	0.0954	0.1379	0.0735	0.1316	0.0235	0.09	0.13	0.07	0.13	0.0926	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.745384	NA	NA	0.088498	0.12787	NA	0.145	NA	3.723502
1280	9	131392522	131392522	C	T	intronic	SPTAN1	NA	NA	NA	intronic	ENSG00000197694	NA	NA	NA	NA	NA	9q34.11	NA	NA	NA	NA	rs41308912	0.05	0.05	0.04	0.0329473	0.0924	NA	0.0821	0.0023	0.0123	0.09	NA	0.11	0.0041	0.0696	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.800604	NA	NA	0.114515	0.025114	NA	0.116	NA	3.723485
1280	1	152975495	152975495	G	A	UTR5	SPRR3	NM_005416:c.-2G>A,NM_001097589:c.-2G>A	NA	NA	UTR5	ENSG00000163209	ENST00000331860:c.-2G>A,ENST00000443178:c.-2G>A,ENST00000295367:c.-2G>A	NA	NA	Score=304;Name=lod=23	NA	1q21.3	NA	NA	NA	NA	rs2075739	0.55	0.55	0.559	0.52496	0.5328	0.6319	0.4337	0.5	0.5051	0.53	0.66	0.48	0.52	0.5337	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.138498	2.138498	NA	0.543488	0.524966	NA	0.464	NA	3.7233454
1280	5	145377136	145377136	T	C	intronic	SH3RF2	NA	NA	NA	ncRNA_exonic	ENSG00000248493	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs4913060	0.65	0.65	0.625	0.659944	0.6103	0.7212	0.572	0.6074	0.7812	0.63	0.71	0.6	0.65	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.260584	NA	NA	NA	NA	NA	0.536	NA	3.7230333
1280	5	145377479	145377479	C	T	intronic	SH3RF2	NA	NA	NA	ncRNA_exonic	ENSG00000248493	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs17492228	0.61	0.61	0.575	0.606829	0.6103	0.7212	0.5591	0.413	0.7812	0.63	0.71	0.59	0.46	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.873626	NA	NA	NA	NA	NA	0.493	NA	3.7230333
1280	8	16927250	16927250	A	C	intronic	MICU3	NA	NA	NA	intronic	ENSG00000155970	NA	NA	NA	NA	NA	8p22	NA	NA	NA	NA	rs17686794	0.13	0.13	0.117	0.114018	0.0984	0.255	0.1138	0.0113	0.1237	0.09	0.26	0.12	0.02	0.0993	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.45108	NA	NA	0.079519	0.025717	ID=COSN168281;OCCURENCE=1(large_intestine)	0.051	NA	3.722781
1280	1	6188779	6188779	G	C	intronic	CHD5	NA	NA	NA	intronic	ENSG00000116254	NA	NA	NA	NA	NA	1p36.31	NA	NA	NA	NA	rs2273033	0.22	0.22	0.201	0.250799	0.2773	0.1875	0.3458	0.0832	0.4479	0.28	0.18	0.31	0.11	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.782898	NA	NA	NA	NA	NA	0.29	NA	3.7227
1280	3	186967942	186967942	G	A	intronic	MASP1	NA	NA	NA	intronic	ENSG00000127241	NA	NA	NA	NA	NA	3q27.3	NA	NA	NA	NA	rs2302818	0.22	0.22	0.22	0.21885	0.2773	0.3403	0.147	0.0212	0.3517	0.29	0.33	0.18	0.04	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.487441	NA	NA	NA	NA	NA	0.145	NA	3.7227
1280	5	64976687	64976687	C	T	intronic	SGTB	NA	NA	NA	intronic	ENSG00000197860	NA	NA	NA	NA	NA	5q12.3	NA	NA	NA	NA	rs3213798	0.24	0.24	0.203	0.268171	0.2773	0.2272	0.2752	0.1649	0.4356	0.27	0.22	0.23	0.23	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.401283	NA	NA	NA	NA	NA	0.333	NA	3.7227
1280	6	129813346	129813346	C	T	intronic	LAMA2	NA	NA	NA	intronic	ENSG00000196569	NA	NA	NA	NA	NA	6q22.33	NA	NA	NA	NA	rs1889891	0.39	0.39	0.375	0.398762	0.2773	0.3502	0.3674	0.5998	0.3241	0.29	0.39	0.35	0.56	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.921024	NA	NA	NA	NA	NA	0.457	NA	3.7227
1280	7	29111578	29111578	A	C	intronic	CPVL	NA	NA	NA	intronic	ENSG00000106066	NA	NA	NA	NA	NA	7p14.3	NA	NA	NA	NA	rs2074784	0.34	0.34	0.322	0.344449	0.2773	0.619	0.2983	0.1248	0.4601	0.27	0.64	0.28	0.14	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.207483	NA	NA	NA	NA	NA	0.217	NA	3.7227
1280	9	116048874	116048874	A	G	intronic	PRPF4	NA	NA	NA	intronic	ENSG00000136875	NA	NA	NA	NA	NA	9q32	NA	NA	NA	NA	rs4979232	0.25	0.25	0.237	0.246206	0.2773	0.3681	0.1499	0.062	0.4059	0.28	0.4	0.18	0.08	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.31705	NA	NA	NA	NA	NA	0.21	NA	3.7227
1280	14	39763111	39763111	G	A	intronic	CTAGE5	NA	NA	NA	intronic	ENSG00000150527,ENSG00000258941	NA	NA	NA	NA	NA	14q21.1	NA	NA	NA	NA	rs956108	0.32	0.32	0.312	0.290535	0.2773	0.5159	0.2334	0.2209	0.2065	0.26	0.52	0.27	0.22	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.11439	NA	NA	NA	NA	NA	0.232	NA	3.7227
1280	15	22784266	22784266	C	T	intergenic	GOLGA6L1,TUBGCP5	dist=38264;dist=49129	NA	NA	ncRNA_exonic	ENSG00000259400	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs11855955	0.35	0.35	0.355	0.341653	0.2773	0.4812	0.2305	0.3812	0.2894	0.27	0.5	0.23	0.39	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.911898	NA	NA	NA	NA	NA	0.261	NA	3.7227
1280	15	79851771	79851771	C	T	intergenic	KIAA1024,MTHFS	dist=87129;dist=284118	NA	NA	ncRNA_exonic	ENSG00000259493	NA	NA	NA	NA	NA	15q25.1	NA	NA	NA	NA	rs2242328	0.36	0.36	0.324	0.352037	0.2773	0.6161	0.2536	0.3192	0.271	0.27	0.6	0.27	0.29	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.278144	NA	NA	NA	NA	NA	0.297	NA	3.7227
1280	16	28137248	28137248	C	A	intronic	XPO6	NA	NA	NA	intronic	ENSG00000169180	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs39631	0.23	0.23	0.222	0.220248	0.2773	0.1032	0.2579	0.3268	0.1115	0.28	0.06	0.26	0.31	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.956611	NA	NA	NA	NA	NA	0.232	NA	3.7227
1280	19	50493131	50493131	G	A	intronic	VRK3	NA	NA	NA	intronic	ENSG00000105053	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs2304112	0.49	0.49	0.511	0.509185	0.2773	0.746	0.4452	0.5688	0.4683	0.26	0.76	0.43	0.59	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.23561	NA	NA	NA	NA	NA	0.435	NA	3.7227
1280	16	21388110	21388110	T	C	ncRNA_exonic	SNX29P1	NA	NA	NA	intergenic	ENSG00000257403,ENSG00000158482	dist=24651;dist=3203	NA	NA	Score=654;Name=lod=608	NA	16p12.2	NA	NA	NA	NA	rs2686119	0.41	0.41	0.27	0.411542	0.7048	0.2063	0.5331	0.1815	0.546	0.66	0.19	0.57	0.15	0.5731	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.737222	NA	NA	NA	NA	NA	0.428	NA	3.7221
1280	7	89861942	89861942	C	T	UTR3	STEAP2	NM_152999:c.*4C>T,NM_001244944:c.*4C>T,NM_001040665:c.*4C>T	NA	NA	UTR3	ENSG00000157214	ENST00000287908:c.*4C>T,ENST00000394622:c.*4C>T	NA	NA	NA	NA	7q21.13	NA	Name=p300	Name=13	NA	rs194526	0.94	0.94	0.933	0.95028	0.8708	0.999	0.902	0.9894	0.9632	0.88	1	0.89	0.99	0.8944	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.152301	NA	NA	0.846172	0.96706	NA	0.913	NA	3.7219614
1280	2	3482912	3482912	G	A	intronic	TRAPPC12	NA	NA	NA	intronic	ENSG00000171853	NA	NA	NA	NA	NA	2p25.3	NA	NA	NA	NA	rs13431788	0.3	0.3	0.31	0.288538	0.2783	0.38	0.2291	0.2579	0.2883	0.28	0.42	0.23	0.24	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.025142	NA	NA	NA	NA	NA	0.326	NA	3.7217
1280	3	42234758	42234758	C	A	intronic	TRAK1	NA	NA	NA	intronic	ENSG00000182606	NA	NA	NA	NA	NA	3p22.1	NA	NA	NA	NA	rs3816397	0.38	0.38	0.347	0.375998	0.2783	0.4931	0.5375	0.2761	0.3763	0.27	0.51	0.52	0.29	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.862484	NA	NA	NA	NA	NA	0.312	NA	3.7217
1280	5	6748810	6748810	G	A	intronic	PAPD7	NA	NA	NA	intronic	ENSG00000112941	NA	NA	NA	NA	NA	5p15.31	NA	NA	NA	NA	rs2279653	0.2	0.2	0.186	0.180312	0.2783	0.1746	0.1801	0.0998	0.1943	0.26	0.2	0.2	0.1	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.731458	NA	NA	NA	NA	NA	0.326	NA	3.7217
1280	9	137659005	137659005	A	T	intronic	COL5A1	NA	NA	NA	intronic	ENSG00000130635	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs4842160	0.32	0.32	0.334	0.327875	0.2783	0.4067	0.1888	0.3873	0.316	0.27	0.39	0.2	0.38	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.547868	NA	NA	NA	NA	ID=COSN168700;OCCURENCE=1(large_intestine)	0.348	NA	3.7217
1280	12	48192062	48192062	A	C	intronic	HDAC7	NA	NA	NA	intronic	ENSG00000061273	NA	NA	NA	NA	NA	12q13.11	NA	NA	NA	NA	rs34922454	0.23	0.23	0.253	0.245407	0.2783	0.0357	0.1844	0.4523	0.1912	0.27	0.04	0.2	0.4	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.515744	NA	NA	NA	NA	NA	0.37	NA	3.7217
1280	12	133374829	133374829	G	A	intronic	GOLGA3	NA	NA	NA	intronic	ENSG00000090615	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs882377	0.2	0.2	0.198	0.173722	0.2783	0.1696	0.1571	0.1233	0.1503	0.29	0.18	0.16	0.11	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.637016	NA	NA	NA	NA	NA	0.225	NA	3.7217
1280	14	39627695	39627695	C	T	intronic	TRAPPC6B	NA	NA	NA	intronic	ENSG00000182400	NA	NA	NA	NA	NA	14q21.1	NA	NA	NA	NA	rs9322994	0.19	0.19	0.179	0.186901	0.2783	0.2321	0.2017	0.0091	0.2761	0.27	0.21	0.23	0.02	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.113825	NA	NA	NA	NA	NA	0.196	NA	3.7217
1280	16	28133152	28133152	C	A	intronic	XPO6	NA	NA	NA	intronic	ENSG00000169180	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs39998	0.23	0.23	0.224	0.220248	0.2783	0.1032	0.2579	0.326	0.1115	0.29	0.06	0.26	0.32	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.187146	2.187146	NA	NA	NA	NA	0.232	NA	3.7217
1280	16	71950293	71950293	G	A	intronic	IST1	NA	NA	NA	intronic	ENSG00000182149,ENSG00000261750	NA	NA	NA	NA	NA	16q22.2	NA	NA	NA	NA	rs12921279	0.14	0.14	0.125	0.123602	0.2783	0.0476	0.1239	0.0356	0.1616	0.29	0.05	0.15	0.03	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.183035	NA	NA	NA	NA	NA	0.159	NA	3.7217
1280	10	37447549	37447549	G	A	intronic	ANKRD30A	NA	NA	NA	intronic	ENSG00000148513	NA	NA	NA	NA	NA	10p11.21	NA	NA	NA	NA	rs11011052	0.07	0.07	0.038	0.0684904	0.0974	0.1161	0.0706	0.025	0.047	0.08	0.09	0.1	0.01	0.0831	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.812149	NA	NA	0.097969	0.028244	NA	0.043	NA	3.721531
1280	21	47850155	47850155	G	C	intronic	PCNT	NA	NA	NA	intronic	ENSG00000160299	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs1023160	0.16	0.16	0.177	0.180112	0.0924	0.004	0.0937	0.4947	0.0879	0.1	0.0035	0.1	0.49	0.1103	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.837554	NA	NA	0.076047	0.439174	NA	0.145	NA	3.721253
1280	11	9917620	9917620	G	C	intronic	SBF2	NA	NA	NA	ncRNA_intronic	ENSG00000255476	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs4910073	0.35	0.35	0.343	0.363818	0.3131	0.251	0.3573	0.5303	0.3119	0.32	0.28	0.39	0.46	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.228913	NA	NA	0.299497	0.49711	NA	0.333	NA	3.7207363
1280	1	110255174	110255174	T	G	intronic	GSTM5	NA	NA	NA	intronic	ENSG00000134201	NA	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	rs929166	0.43	0.43	0.303	0.353435	0.2793	0.6865	0.438	0.1225	0.3384	0.34	0.69	0.47	0.23	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.167011	NA	NA	NA	NA	NA	0.319	NA	3.7207
1280	2	138378388	138378388	A	G	intronic	THSD7B	NA	NA	NA	intronic	ENSG00000144229	NA	NA	NA	NA	NA	2q22.1	NA	NA	NA	NA	rs1448922	0.26	0.26	0.27	0.282348	0.2793	0.0734	0.1772	0.4539	0.3436	0.28	0.08	0.22	0.46	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.624987	NA	NA	NA	NA	NA	0.42	NA	3.7207
1280	4	89669110	89669110	G	A	intronic	FAM13A	NA	NA	NA	intronic	ENSG00000138640	NA	NA	NA	NA	NA	4q22.1	NA	NA	NA	NA	rs7658690	0.46	0.46	0.45	0.516573	0.2793	0.5446	0.2853	0.7458	0.5859	0.29	0.56	0.27	0.73	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.980005	NA	NA	NA	NA	NA	0.471	NA	3.7207
1280	4	89669115	89669115	A	G	intronic	FAM13A	NA	NA	NA	intronic	ENSG00000138640	NA	NA	NA	NA	NA	4q22.1	NA	NA	NA	NA	rs7658214	0.46	0.46	0.333	0.516973	0.2793	0.5446	0.2853	0.7474	0.5859	0.29	0.56	0.27	0.73	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.417618	NA	NA	NA	NA	NA	0.471	NA	3.7207
1280	4	89669928	89669928	G	A	intronic	FAM13A	NA	NA	NA	intronic	ENSG00000138640	NA	NA	NA	NA	NA	4q22.1	NA	NA	NA	NA	rs3822077	0.45	0.45	0.461	0.511382	0.2793	0.5446	0.2839	0.7269	0.5859	0.29	0.56	0.27	0.7	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.560569	NA	NA	NA	NA	NA	0.464	NA	3.7207
1280	12	133428131	133428131	C	T	intronic	CHFR	NA	NA	NA	intronic	ENSG00000072609	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs2306540	0.18	0.18	0.168	0.142572	0.2793	0.1736	0.1585	0.0113	0.136	0.29	0.18	0.16	0.02	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.176207	NA	NA	NA	NA	NA	0.167	NA	3.7207
1280	14	21486054	21486054	T	C	intronic	NDRG2	NA	NA	NA	intronic	ENSG00000165795	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs1243444	0.28	0.28	0.262	0.274561	0.2793	0.2966	0.3285	0.2398	0.2556	0.27	0.27	0.32	0.26	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.209985	NA	NA	NA	NA	NA	0.239	NA	3.7207
1280	14	51210853	51210853	T	C	intronic	NIN	NA	NA	NA	intronic	ENSG00000100503	NA	NA	NA	NA	NA	14q22.1	NA	NA	NA	NA	rs1547078	0.18	0.18	0.175	0.21226	0.2793	0.1458	0.2075	0.1498	0.2996	0.26	0.14	0.2	0.12	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.508872	NA	NA	NA	NA	NA	0.138	NA	3.7207
1280	1	150799112	150799112	A	C	intronic	ARNT	NA	NA	NA	intronic	ENSG00000143437	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs3768017	0.08	0.08	0.074	0.0780751	0.0905	0.1726	0.0504	0.003	0.089	0.08	0.19	0.04	NA	0.0958	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.061303	NA	NA	0.093015	0.018872	NA	0.065	NA	3.720685
1280	6	125112614	125112614	C	A	intronic	NKAIN2	NA	NA	NA	intronic	ENSG00000188580	NA	NA	NA	NA	NA	6q22.31	NA	NA	NA	NA	rs877058	0.22	0.22	0.206	0.208466	0.1332	0.4911	0.0793	0.0976	0.2362	0.13	0.5	0.07	0.14	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.411889	NA	NA	0.146135	0.100434	NA	0.246	NA	3.720665
1280	7	148801091	148801091	G	A	exonic	ZNF425	NA	synonymous SNV	ZNF425:NM_001001661:exon4:c.C1872T:p.N624N	exonic	ENSG00000204947	NA	synonymous SNV	ENSG00000204947:ENST00000378061:exon4:c.C1872T:p.N624N	NA	NA	7q36.1	NA	NA	NA	NA	rs11525060	0.66	0.66	0.625	0.659145	0.6193	0.9067	0.6931	0.3487	0.8405	0.64	0.91	0.67	0.38	0.6831	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.330635	NA	NA	0.643605	0.417612	NA	0.674	NA	3.7206616
1280	2	233321836	233321836	G	A	intronic	ALPI	NA	NA	NA	intronic	ENSG00000163295	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs2272422	0.09	0.09	0.086	0.0924521	0.1064	0.0804	0.0764	0.1074	0.0818	0.1	0.08	0.08	0.1	0.0909	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.889137	NA	NA	0.082093	0.103722	NA	0.109	NA	3.720607
1280	17	76198704	76198704	G	T	intronic	AFMID	NA	NA	NA	intronic	ENSG00000183077	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs113668382	0.05	0.05	0.076	0.0419329	0.0845	0.002	0.0548	0.0106	0.0726	0.09	0.0017	0.07	0.02	0.0941	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.09296	NA	NA	0.101186	0.024318	NA	0.029	NA	3.720214
1280	20	36932798	36932798	C	G	intronic	BPI	NA	NA	NA	ncRNA_intronic	ENSG00000206249	NA	NA	NA	NA	NA	20q11.23	NA	NA	NA	NA	rs5741798	0.27	0.27	0.287	0.254393	0.2187	0.4167	0.304	0.1505	0.229	0.2	0.45	0.28	0.16	0.2139	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.224265	NA	NA	0.180581	0.17635	NA	0.217	NA	3.7201523
1280	19	45883554	45883554	C	T	intronic	PPP1R13L	NA	NA	NA	intronic	ENSG00000104881	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs34004521	0.07	0.07	0.065	0.0766773	0.1312	0.0268	0.0648	0.0159	0.1626	0.13	0.03	0.06	0.03	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.122774	NA	NA	0.148649	0.03396	NA	0.094	NA	3.720151
1280	2	28824940	28824940	G	A	intronic	PLB1	NA	NA	NA	intronic	ENSG00000163803	NA	NA	NA	NA	NA	2p23.2	NA	NA	NA	NA	rs67381370	0.29	0.29	0.277	0.275958	0.2803	0.3442	0.2363	0.2383	0.2802	0.29	0.33	0.23	0.29	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.180453	NA	NA	NA	NA	NA	0.341	NA	3.7197
1280	2	207101093	207101093	A	T	intergenic	GPR1,ZDBF2	dist=18322;dist=38430	NA	NA	ncRNA_exonic	ENSG00000159186	NA	NA	NA	NA	NA	2q33.3	NA	NA	NA	NA	rs726166	0.29	0.29	0.323	0.303914	0.2803	0.2292	0.1916	0.4047	0.3487	0.28	0.23	0.23	0.42	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.579333	NA	NA	NA	NA	NA	0.203	NA	3.7197
1280	9	85925309	85925309	T	C	intronic	FRMD3	NA	NA	NA	intronic	ENSG00000172159	NA	NA	NA	NA	NA	9q21.32	NA	NA	NA	NA	rs11140018	0.26	0.26	0.25	0.247604	0.2803	0.3859	0.281	0.0953	0.2536	0.28	0.38	0.27	0.09	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.679696	NA	NA	NA	NA	NA	0.174	NA	3.7197
1280	10	13233471	13233471	C	T	intronic	MCM10	NA	NA	NA	intronic	ENSG00000065328	NA	NA	NA	NA	NA	10p13	NA	NA	NA	NA	rs7916762	0.28	0.28	0.279	0.281949	0.2803	0.4077	0.2032	0.2057	0.3129	0.28	0.41	0.21	0.2	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.649419	NA	NA	NA	NA	NA	0.297	NA	3.7197
1280	19	8979112	8979112	G	C	intronic	MUC16	NA	NA	NA	intronic	ENSG00000181143	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs73493609	0.3	0.3	0.292	0.350439	0.2803	0.4018	0.2795	0.2973	0.4918	0.27	0.35	0.27	0.31	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.823735	1.823735	NA	NA	NA	NA	0.341	NA	3.7197
1280	19	48848702	48848702	C	T	intronic	TMEM143	NA	NA	NA	intronic	ENSG00000161558	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs17361438	0.17	0.17	NA	0.154553	0.2803	0.1369	0.2176	0.0386	0.1554	0.26	0.14	0.25	0.02	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.822183	NA	NA	NA	NA	NA	0.188	NA	3.7197
1280	20	43534934	43534934	G	A	intronic	YWHAB	NA	NA	NA	intronic	ENSG00000166913	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs2425675	0.25	0.25	0.235	0.239217	0.2803	0.2113	0.3545	0.1884	0.2127	0.28	0.22	0.35	0.17	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.331063	NA	NA	NA	NA	NA	0.159	NA	3.7197
1280	20	47621554	47621554	G	A	intronic	ARFGEF2	NA	NA	NA	intronic	ENSG00000124198	NA	NA	NA	NA	NA	20q13.13	NA	NA	NA	NA	rs4810910	0.37	0.37	0.339	0.373003	0.2803	0.4821	0.3977	0.357	0.3599	0.27	0.51	0.38	0.36	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.310205	NA	NA	NA	NA	ID=COSN166562;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.493	NA	3.7197
1280	15	56720715	56720715	T	G	intronic	TEX9	NA	NA	NA	UTR3	ENSG00000151575	ENST00000560582:c.*73T>G	NA	NA	NA	NA	15q21.3	NA	NA	NA	NA	rs1554410	0.32	0.32	0.29	0.294928	0.4473	0.3433	0.353	0.09	0.3241	0.45	0.32	0.36	0.1	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.255319	1.255319	NA	NA	NA	NA	0.181	NA	3.7193667
1280	14	20216560	20216560	C	T	downstream	OR4Q3	NA	NA	NA	ncRNA_intronic	ENSG00000258438	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs12435367	0.08	0.08	0.062	0.102236	0.1471	0.0079	0.0764	0.0613	0.227	0.16	0.01	0.1	0.04	0.1483	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.101866	NA	NA	0.151986	0.073509	NA	0.058	NA	3.7192806
1280	5	68728544	68728544	G	A	intronic	MARVELD2	NA	NA	NA	intronic	ENSG00000152939	NA	NA	NA	NA	NA	5q13.2	NA	Name=SP1,IRF4_(M-17),BCL11A,NFKB,SRF	NA	NA	rs299075	0.34	0.34	0.308	0.282149	0.4493	0.3909	0.2997	0.062	0.2832	0.46	0.39	0.37	0.06	0.3791	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.429174	NA	NA	0.452442	0.132093	NA	0.304	NA	3.719158
1280	11	55038375	55038375	T	C	UTR3	TRIM48	NM_024114:c.*464T>C	NA	NA	UTR3	ENSG00000150244	ENST00000417545:c.*464T>C	NA	NA	NA	NA	11q11	NA	NA	NA	NA	rs3213870	0.57	0.57	0.543	0.581869	0.6143	0.7054	0.7104	0.3283	0.6728	0.61	0.71	0.69	0.25	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.018253	NA	1	NA	NA	NA	0.471	NA	3.7190334
1280	5	145377423	145377423	T	C	intronic	SH3RF2	NA	NA	NA	ncRNA_exonic	ENSG00000248493	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs17426499	0.73	0.73	0.757	0.765974	0.6143	0.7212	0.6023	0.9902	0.7812	0.63	0.71	0.62	0.98	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.301513	NA	NA	NA	NA	NA	0.645	NA	3.7190333
1280	14	93398078	93398078	G	A	intronic	CHGA	NA	NA	NA	intronic	ENSG00000100604	NA	NA	NA	NA	NA	14q32.12	NA	NA	NA	NA	rs9658656	0.15	0.15	0.148	0.182308	0.0736	0.2391	0.1859	0.2156	0.1881	0.07	0.21	0.17	0.22	0.1243	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.069753	NA	NA	0.08314	0.178166	NA	0.174	NA	3.71896
1280	2	28854816	28854816	G	A	intronic	PLB1	NA	NA	NA	intronic	ENSG00000163803	NA	NA	NA	NA	NA	2p23.2	NA	NA	NA	NA	rs2272388	0.24	0.24	0.224	0.23123	0.2813	0.3204	0.1758	0.1142	0.2853	0.29	0.29	0.18	0.14	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.075654	NA	NA	NA	NA	NA	0.239	NA	3.7187
1280	3	87373695	87373695	C	G	intergenic	POU1F1,HTR1F	dist=47958;dist=658031	NA	NA	ncRNA_exonic	ENSG00000239829	NA	NA	NA	NA	NA	3p11.2	NA	NA	NA	NA	rs78549143	0.25	0.25	0.18	0.252995	0.2813	0.3512	0.3184	0.0234	0.3865	0.3	0.34	0.33	0.03	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.207617	NA	NA	NA	NA	NA	0.254	NA	3.7187
1280	3	125734272	125734272	G	A	intronic	SLC41A3	NA	NA	NA	intronic	ENSG00000114544	NA	NA	NA	NA	NA	3q21.2	NA	NA	NA	NA	rs2279820	0.26	0.26	0.276	0.27516	0.2813	0.1825	0.2666	0.3563	0.2607	0.27	0.19	0.26	0.33	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.503444	2.503444	NA	NA	NA	NA	0.261	NA	3.7187
1280	8	57390755	57390755	G	A	intergenic	PENK,LOC100507632	dist=31473;dist=40123	NA	NA	ncRNA_intronic	ENSG00000254254	NA	NA	NA	NA	NA	8q12.1	NA	NA	NA	NA	rs3824274	0.24	0.24	0.217	0.224241	0.2813	0.2321	0.353	0.1127	0.2168	0.28	0.23	0.31	0.13	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.077258	NA	NA	NA	NA	NA	0.196	NA	3.7187
1280	12	103699685	103699685	C	T	intronic	C12orf42	NA	NA	NA	intronic	ENSG00000179088	NA	NA	NA	NA	NA	12q23.2	NA	NA	NA	NA	rs7488867	0.37	0.37	0.351	0.388978	0.2813	0.2996	0.2752	0.5764	0.4192	0.28	0.32	0.29	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.067844	NA	NA	NA	NA	NA	0.399	NA	3.7187
1280	12	133378610	133378610	G	A	intronic	GOLGA3	NA	NA	NA	intronic	ENSG00000090615	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs75002364	0.2	0.2	0.193	0.171925	0.2813	0.1716	0.1628	0.1225	0.1329	0.29	0.18	0.17	0.11	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.327782	NA	NA	NA	NA	NA	0.217	NA	3.7187
1280	22	44564407	44564407	C	T	intronic	PARVB	NA	NA	NA	intronic	ENSG00000188677	NA	NA	NA	NA	NA	22q13.31	NA	NA	NA	NA	rs139096	0.21	0.21	0.194	0.22504	0.2813	0.1022	0.3213	0.1271	0.3579	0.28	0.11	0.33	0.15	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.847747	NA	NA	NA	NA	NA	0.268	NA	3.7187
1280	7	150217248	150217248	A	G	exonic	GIMAP7	NA	synonymous SNV	GIMAP7:NM_153236:exon2:c.A186G:p.V62V	exonic	ENSG00000179144	NA	synonymous SNV	ENSG00000179144:ENST00000313543:exon2:c.A186G:p.V62V	NA	NA	7q36.1	NA	NA	NA	NA	rs3735081	0.75	0.75	0.764	0.78155	0.6302	0.7421	0.7277	0.9713	0.7597	0.64	0.72	0.73	0.96	0.6926	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.548755	NA	NA	0.625233	0.914889	NA	0.833	NA	3.7186336
1280	12	50537060	50537060	C	G	intronic	CERS5	NA	NA	NA	ncRNA_intronic	ENSG00000272368	NA	NA	NA	NA	NA	12q13.12	NA	NA	NA	NA	rs2277355	0.41	0.41	0.41	0.410743	0.2604	0.7232	0.4366	0.3056	0.3671	0.27	0.71	0.39	0.31	0.3544	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.224119	NA	NA	NA	NA	NA	0.319	NA	3.7185333
1280	5	52368546	52368546	T	C	intronic	ITGA2	NA	NA	NA	intronic	ENSG00000164171	NA	NA	NA	NA	NA	5q11.2	NA	NA	NA	NA	rs3212584	0.1	0.1	0.107	0.104233	0.0885	0.0317	0.0663	0.2035	0.0879	0.09	0.03	0.06	0.26	0.0971	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.556791	NA	NA	0.096301	0.181571	NA	0.101	NA	3.718099
1280	17	80574364	80574364	C	A	intronic	WDR45B	NA	NA	NA	intronic	ENSG00000141580	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs2306757	0.16	0.16	0.177	0.182308	0.0855	0.2669	0.0533	0.2534	0.1902	0.09	0.25	0.06	0.26	0.1189	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.646112	NA	NA	0.077558	0.225374	NA	0.138	NA	3.718042
1280	2	113332421	113332421	T	C	intronic	POLR1B	NA	NA	NA	intronic	ENSG00000125630	NA	NA	NA	NA	NA	2q13	NA	NA	NA	NA	rs10169344	0.19	0.19	0.163	0.20627	0.0696	0.2927	0.2118	0.2769	0.1585	0.07	0.3	0.17	0.26	0.1348	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.980546	NA	NA	0.077674	0.245574	ID=COSM148929;OCCURENCE=1(stomach)	0.225	NA	3.717926
1280	12	31249708	31249708	C	T	intronic	DDX11	NA	NA	NA	intronic	ENSG00000013573	NA	NA	NA	NA	NA	12p11.21	NA	NA	NA	NA	rs71455622	0.05	0.05	0.033	0.0397364	0.1014	0.002	0.0735	0.0098	0.0317	0.1	0.0017	0.07	0.02	0.0706	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.350644	NA	NA	0.110116	0.018384	NA	0.007	NA	3.717884
1280	3	170732599	170732599	G	A	intronic	SLC2A2	NA	NA	NA	intronic	ENSG00000163581	NA	NA	NA	NA	NA	3q26.2	NA	NA	NA	NA	rs7356034	0.33	0.33	0.352	0.330871	0.2823	0.2093	0.3055	0.5234	0.2638	0.28	0.21	0.33	0.53	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.284041	NA	NA	NA	NA	ID=COSN167072;OCCURENCE=1(large_intestine)	0.428	NA	3.7177
1280	6	112454185	112454185	A	G	intronic	LAMA4	NA	NA	NA	intronic	ENSG00000112769	NA	NA	NA	NA	NA	6q21	NA	NA	NA	NA	rs764587	0.24	0.24	0.228	0.241014	0.2823	0.1131	0.2983	0.2436	0.2863	0.28	0.12	0.32	0.25	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.032246	NA	NA	NA	NA	NA	0.312	NA	3.7177
1280	12	52712817	52712817	G	A	intronic	KRT83	NA	NA	NA	intronic	ENSG00000170523	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs3741717	0.37	0.37	0.355	0.359026	0.2823	0.506	0.3372	0.3525	0.3108	0.29	0.5	0.36	0.34	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.365194	NA	NA	NA	NA	NA	0.203	NA	3.7177
1280	19	42261014	42261014	G	A	intronic	CEACAM6	NA	NA	NA	intronic	ENSG00000086548,ENSG00000267881	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs57827663	0.23	0.23	0.196	0.248403	0.2823	0.1062	0.2954	0.2421	0.3354	0.29	0.08	0.31	0.25	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.386848	NA	NA	NA	NA	NA	0.413	NA	3.7177
1280	21	34985754	34985754	T	C	intronic	CRYZL1	NA	NA	NA	intronic	ENSG00000205758,ENSG00000249209	NA	NA	NA	NA	NA	21q22.11	NA	NA	NA	NA	rs2276226	0.18	0.18	0.164	0.174321	0.2823	0.1637	0.2219	0.0461	0.2137	0.27	0.15	0.24	0.03	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.509981	NA	NA	NA	NA	NA	0.072	NA	3.7177
1280	5	68720419	68720419	T	G	intronic	MARVELD2	NA	NA	NA	intronic	ENSG00000152939	NA	NA	NA	NA	NA	5q13.2	NA	NA	NA	NA	rs299099	0.34	0.34	0.304	0.281749	0.4493	0.3909	0.2997	0.0598	0.2843	0.46	0.39	0.37	0.05	0.3807	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.059201	NA	NA	0.452326	0.127611	NA	0.297	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000036810.1;CLNDSDB=.;CLNDSDBID=.	3.717674
1280	8	39463823	39463823	T	C	intronic	ADAM18	NA	NA	NA	intronic	ENSG00000168619	NA	NA	NA	Score=251;Name=lod=14	NA	8p11.22	NA	NA	NA	NA	rs13268577	0.28	0.28	0.246	0.272963	0.4384	0.1438	0.4121	0.1248	0.3374	0.44	0.15	0.4	0.11	0.3952	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.601092	NA	NA	0.448763	0.187869	NA	0.297	NA	3.717637
1280	6	39034095	39034095	C	T	intronic	GLP1R	NA	NA	NA	intronic	ENSG00000112164	NA	NA	NA	NA	NA	6p21.2	NA	NA	NA	NA	rs10305457	0.07	0.07	0.047	0.0688898	0.0815	0.006	0.1873	0.0386	0.0777	0.06	0.01	0.18	0.06	0.106	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.974916	NA	NA	0.094884	0.051521	NA	0.036	NA	3.717616
1280	2	61522123	61522123	T	C	exonic	USP34	NA	synonymous SNV	USP34:NM_014709:exon32:c.A4422G:p.E1474E	exonic	ENSG00000115464	NA	synonymous SNV	ENSG00000115464:ENST00000398571:exon32:c.A4422G:p.E1474E	Score=647;Name=lod=566	NA	2p15	NA	NA	NA	NA	rs13014347	0.99	0.99	0.988	0.994609	0.9791	1	0.9914	1	1	0.98	1	0.99	1	0.9879	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.003372	NA	NA	0.9822	0.996707	NA	0.993	NA	3.7174666
1280	19	9678748	9678748	T	G	intronic	ZNF121	NA	NA	NA	intronic	ENSG00000197961	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs12462832	0.12	0.12	0.111	0.156749	0.0815	0.0476	0.1455	0.264	0.2096	0.08	0.03	0.14	0.28	0.1173	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.532302	2.532302	NA	0.08376	0.212045	NA	0.087	NA	3.71744
1280	14	92136126	92136126	C	G	intronic	CATSPERB	NA	NA	NA	intronic	ENSG00000133962	NA	NA	NA	NA	NA	14q32.12	NA	NA	NA	NA	rs3742652	0.08	0.08	0.075	0.0690895	0.0974	0.0556	0.0778	0.0908	0.0184	0.09	0.05	0.09	0.1	0.0823	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.589549	NA	NA	0.103372	0.088743	NA	0.051	NA	3.716928
1280	17	67215712	67215712	C	T	exonic	ABCA10	NA	synonymous SNV	ABCA10:NM_080282:exon7:c.G504A:p.V168V	exonic	ENSG00000154263	NA	synonymous SNV	ENSG00000154263:ENST00000518929:exon4:c.G504A:p.V168V,ENSG00000154263:ENST00000523419:exon4:c.G504A:p.V168V,ENSG00000154263:ENST00000522406:exon6:c.G504A:p.V168V,ENSG00000154263:ENST00000269081:exon7:c.G504A:p.V168V,ENSG00000154263:ENST00000416101:exon7:c.G504A:p.V168V,ENSG00000154263:ENST00000432313:exon7:c.G504A:p.V168V	NA	NA	17q24.3	NA	NA	NA	NA	rs12941264	0.55	0.55	0.54	0.598442	0.662	0.3462	0.6066	0.7133	0.6319	0.65	0.3	0.58	0.66	0.6294	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.213539	NA	NA	0.65852	0.699501	NA	0.558	NA	3.7167466
1280	2	10566792	10566792	C	G	intronic	HPCAL1	NA	NA	NA	intronic	ENSG00000115756	NA	NA	NA	NA	NA	2p25.1	NA	NA	NA	NA	rs2270306	0.17	0.17	0.172	0.173123	0.2833	0.0446	0.1599	0.1702	0.2055	0.26	0.03	0.17	0.19	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.198999	NA	NA	NA	NA	NA	0.261	NA	3.7167
1280	4	74450830	74450830	G	A	intronic	RASSF6	NA	NA	NA	intronic	ENSG00000169435	NA	NA	NA	NA	NA	4q13.3	NA	NA	NA	NA	rs7682201	0.25	0.25	0.235	0.263179	0.2833	0.1141	0.4712	0.2761	0.2311	0.28	0.11	0.41	0.25	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.012502	NA	NA	NA	NA	NA	0.348	NA	3.7167
1280	7	129916325	129916325	C	T	intronic	CPA2	NA	NA	NA	intronic	ENSG00000158516	NA	NA	NA	NA	NA	7q32.2	NA	NA	NA	NA	rs41274170	0.14	0.14	0.127	0.096246	0.2833	0.0079	0.1729	0.0098	0.0573	0.29	0.01	0.17	0.02	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.603847	NA	NA	NA	NA	NA	0.167	NA	3.7167
1280	14	39855255	39855255	T	C	intergenic	CTAGE5,FBXO33	dist=34858;dist=10322	NA	NA	ncRNA_exonic	ENSG00000259100	NA	NA	NA	NA	NA	14q21.1	NA	NA	NA	NA	rs7145821	0.37	0.37	0.354	0.35024	0.2833	0.5258	0.2464	0.4175	0.2209	0.27	0.52	0.28	0.44	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.652453	NA	NA	NA	NA	NA	0.333	NA	3.7167
1280	20	44673546	44673546	C	G	intronic	SLC12A5	NA	NA	NA	intronic	ENSG00000124140	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs2297197	0.24	0.24	0.191	0.23742	0.2833	0.2976	0.2262	0.1006	0.3211	0.28	0.27	0.27	0.11	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.799258	NA	NA	NA	NA	NA	0.21	NA	3.7167
1280	4	141549393	141549393	C	A	intronic	TBC1D9	NA	NA	NA	intronic	ENSG00000109436	NA	NA	NA	NA	NA	4q31.21	NA	NA	Name=6	NA	rs2291711	0.69	0.69	0.668	0.699081	0.668	0.6319	0.7003	0.7648	0.7106	0.66	0.61	0.73	0.78	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.288378	NA	NA	0.615651	0.708092	NA	0.739	NA	3.716349
1280	6	109954252	109954252	C	T	exonic	AK9	NA	synonymous SNV	AK9:NM_001145128:exon12:c.G1128A:p.L376L,AK9:NM_145025:exon12:c.G1128A:p.L376L	exonic	ENSG00000155085	NA	synonymous SNV	ENSG00000155085:ENST00000285397:exon12:c.G1128A:p.L376L,ENSG00000155085:ENST00000368948:exon12:c.G1128A:p.L376L,ENSG00000155085:ENST00000424296:exon12:c.G1128A:p.L376L	NA	NA	6q21	NA	NA	NA	NA	rs1406957	0.63	0.63	0.602	0.652157	0.6431	0.8472	0.7305	0.3238	0.8487	0.65	0.85	0.69	0.32	0.67	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.91676	NA	NA	0.637326	0.365865	ID=COSM450314,COSM450315;OCCURENCE=1(breast)	0.536	NA	3.7162406
1280	16	84900472	84900472	T	C	intronic	CRISPLD2	NA	NA	NA	intronic	ENSG00000103196	NA	NA	NA	NA	NA	16q24.1	NA	NA	NA	NA	rs72799566	0.05	0.05	0.051	0.0477236	0.0954	0.002	0.0778	0.0159	0.0675	0.09	0.0017	0.09	0.02	0.0812	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.805956	NA	NA	0.107442	0.031378	NA	0.13	NA	3.715958
1280	9	33469406	33469406	C	T	intronic	NOL6	NA	NA	NA	intronic	ENSG00000165271	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs2777746	0.27	0.27	0.242	0.248802	0.2843	0.1796	0.3329	0.3154	0.1339	0.29	0.2	0.29	0.31	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.509097	NA	NA	NA	NA	ID=COSN168511;OCCURENCE=1(large_intestine)	0.304	NA	3.7157
1280	9	92020159	92020159	T	C	intronic	SEMA4D	NA	NA	NA	intronic	ENSG00000187764	NA	NA	NA	NA	NA	9q22.2	NA	NA	NA	NA	rs13287862	0.29	0.29	0.3	0.298123	0.2843	0.3095	0.2032	0.3631	0.2802	0.29	0.33	0.2	0.33	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.092595	NA	NA	NA	NA	NA	0.319	NA	3.7157
1280	14	105686570	105686570	T	C	intronic	BRF1	NA	NA	NA	intronic	ENSG00000185024	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs8005486	0.33	0.33	0.335	0.338858	0.2843	0.0179	0.2997	0.8351	0.0828	0.28	0.02	0.29	0.81	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.737232	NA	NA	NA	NA	NA	0.457	NA	3.7157
1280	16	3638809	3638809	G	A	intronic	SLX4	NA	NA	NA	intronic	ENSG00000188827	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs8058233	0.45	0.45	0.48	0.478634	0.2843	0.369	0.3386	0.8154	0.4356	0.29	0.39	0.36	0.85	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.441532	NA	NA	NA	NA	NA	0.464	NA	3.7157
1280	9	35062972	35062972	C	T	intronic	VCP	NA	NA	NA	intronic	ENSG00000165280	NA	NA	NA	Score=652;Name=lod=595	NA	9p13.3	Score=881;Name=V$SOX9_B1	NA	NA	NA	rs514492	0.7	0.7	0.677	0.701078	0.7664	0.4534	0.8372	0.7383	0.7423	0.77	0.49	0.83	0.75	0.7442	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.646731	NA	NA	0.773837	0.731276	ID=COSM150600;OCCURENCE=1(stomach)	0.797	NA	3.715563
1280	17	73221439	73221439	C	T	exonic	NUP85	NA	synonymous SNV	NUP85:NM_024844:exon9:c.C735T:p.P245P	exonic	ENSG00000125450	NA	synonymous SNV	ENSG00000125450:ENST00000579557:exon2:c.C138T:p.P46P,ENSG00000125450:ENST00000583877:exon3:c.C216T:p.P72P,ENSG00000125450:ENST00000447371:exon8:c.C231T:p.P77P,ENSG00000125450:ENST00000541827:exon8:c.C597T:p.P199P,ENSG00000125450:ENST00000579298:exon8:c.C600T:p.P200P,ENSG00000125450:ENST00000579324:exon8:c.C399T:p.P133P,ENSG00000125450:ENST00000245544:exon9:c.C735T:p.P245P	Score=385;Name=lod=49	NA	17q25.1	NA	NA	NA	NA	rs2291029	0.9	0.9	0.884	0.86901	0.998	0.9018	0.9222	0.6868	0.911	1	0.95	0.93	0.66	0.9558	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.099438	2.099438	NA	0.997442	0.747844	NA	0.848	NA	3.7154246
1281	2	29344410	29344410	T	A	intronic	CLIP4	NA	NA	NA	intronic	ENSG00000115295	NA	NA	NA	NA	NA	2p23.2	NA	NA	NA	NA	rs56075962	0.06	0.06	0.049	0.0429313	0.1103	NA	0.0504	0.0439	0.0112	0.11	NA	0.06	0.06	0.0768	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.082468	NA	NA	0.09814	0.060826	NA	0.043	NA	3.71476
1281	1	151679963	151679963	C	T	intronic	CELF3	NA	NA	NA	ncRNA_intronic	ENSG00000227045	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs2280473	0.2	0.2	0.175	0.178914	0.2058	0.2391	0.3098	0.0923	0.1135	0.2	0.23	0.3	0.11	0.2062	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.496974	NA	NA	0.206608	0.098093	ID=COSN163234;OCCURENCE=1(breast)	0.225	NA	3.7147253
1281	1	19200895	19200895	C	T	intronic	ALDH4A1	NA	NA	NA	intronic	ENSG00000159423,ENSG00000255275	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs35657817	0.24	0.24	0.248	0.22504	0.2853	0.003	0.2421	0.4244	0.1104	0.3	0.0017	0.28	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.642072	NA	NA	NA	NA	NA	0.261	NA	3.7147
1281	3	31494993	31494993	C	T	intergenic	GADL1,STT3B	dist=558840;dist=79498	NA	NA	ncRNA_exonic	ENSG00000227339	NA	NA	NA	NA	NA	3p23	NA	NA	NA	NA	rs9824199	0.46	0.46	0.444	0.460064	0.2853	0.6677	0.3602	0.5545	0.3691	0.27	0.68	0.38	0.55	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.997923	NA	NA	NA	NA	NA	0.348	NA	3.7147
1281	10	126384610	126384610	G	A	intronic	FAM53B	NA	NA	NA	intronic	ENSG00000189319,ENSG00000258539	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs10901807	0.21	0.21	0.226	0.173323	0.2853	0.2401	0.1455	0.0998	0.1084	0.29	0.23	0.17	0.11	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.735711	NA	NA	NA	NA	NA	0.174	NA	3.7147
1281	18	22049016	22049016	G	A	intronic	HRH4	NA	NA	NA	intronic	ENSG00000134489	NA	NA	NA	NA	NA	18q11.2	NA	NA	NA	NA	rs17797951	0.18	0.18	0.18	0.183906	0.2853	0.1597	0.1844	0.0234	0.3211	0.27	0.16	0.2	0.04	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.108058	NA	NA	NA	NA	NA	0.152	NA	3.7147
1281	20	42157237	42157237	C	T	intronic	L3MBTL1	NA	NA	NA	intronic	ENSG00000185513	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs2071972	0.37	0.37	0.39	0.359625	0.2853	0.2688	0.3847	0.5166	0.2996	0.28	0.29	0.38	0.59	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.182215	NA	NA	NA	NA	NA	0.326	NA	3.7147
1281	5	678062	678062	A	G	exonic	TPPP	NA	synonymous SNV	TPPP:NM_007030:exon2:c.T114C:p.A38A	exonic	ENSG00000171368	NA	synonymous SNV	ENSG00000171368:ENST00000360578:exon2:c.T114C:p.A38A	NA	NA	5p15.33	NA	NA	NA	NA	rs450628	0.71	0.71	0.669	0.754193	0.6451	0.6647	0.7003	0.9682	0.7076	0.64	0.61	0.7	0.96	0.6676	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.564511	NA	NA	0.639581	0.922131	NA	0.623	NA	3.7143856
1281	12	124102893	124102893	G	A	intronic	DDX55	NA	NA	NA	UTR5	ENSG00000111364	ENST00000421670:c.-338G>A	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs71458808	0.14	0.14	0.12	0.141773	0.2485	0.0119	0.1427	0.1059	0.2137	0.25	0.01	0.15	0.11	0.2039	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.58805	NA	NA	NA	NA	NA	0.109	NA	3.7142667
1281	9	433978	433978	A	G	intronic	DOCK8	NA	NA	NA	intronic	ENSG00000107099	NA	NA	NA	Score=522;Name=lod=176	NA	9p24.3	Score=919;Name=V$AREB6_01	NA	NA	NA	rs2360712	0.76	0.76	0.738	0.721046	0.7704	0.9772	0.8156	0.4766	0.6697	0.78	0.98	0.8	0.46	0.7588	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.004002	2.004002	NA	0.756628	0.515433	NA	0.667	NA	3.714172
1281	19	35978299	35978299	C	T	UTR3	KRTDAP	NM_207392:c.*31G>A,NM_001244847:c.*31G>A	NA	NA	UTR3	ENSG00000188508	ENST00000484218:c.*31G>A,ENST00000338897:c.*31G>A	NA	NA	NA	NA	19q13.12	NA	NA	NA	NA	rs7976	0.12	0.12	0.105	0.109225	0.2266	0.0109	0.1095	0.0961	0.1074	0.22	0.01	0.12	0.11	0.1704	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.180115	NA	NA	0.222209	0.113936	NA	0.123	NA	3.7141244
1281	19	10271034	10271034	C	G	intronic	DNMT1	NA	NA	NA	intronic	ENSG00000130816	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs2241531	0.23	0.23	0.214	0.236022	0.0726	0.4018	0.1888	0.2511	0.2464	0.07	0.42	0.18	0.27	0.1474	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.565034	NA	NA	0.06593	0.192238	ID=COSN165718;OCCURENCE=1(breast)	0.246	NA	3.71407
1281	6	7601776	7601776	G	A	intronic	SNRNP48	NA	NA	NA	intronic	ENSG00000168566	NA	NA	NA	NA	NA	6p24.3	NA	NA	NA	NA	rs7739209	0.12	0.12	0.128	0.1248	0.0964	NA	0.0706	0.3517	0.0143	0.09	NA	0.07	0.35	0.0965	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.97491	NA	NA	0.093161	0.30867	NA	0.21	NA	3.713939
1281	2	174227876	174227876	A	G	intronic	CDCA7	NA	NA	NA	intronic	ENSG00000144354	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	rs767074	0.35	0.35	0.358	0.377196	0.2863	0.3036	0.2709	0.5318	0.4131	0.29	0.31	0.3	0.52	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.062136	NA	NA	NA	NA	NA	0.362	NA	3.7137
1281	17	6943266	6943266	G	A	exonic	SLC16A13	NA	synonymous SNV	SLC16A13:NM_201566:exon4:c.G1266A:p.G422G	exonic	ENSG00000174327	NA	synonymous SNV	ENSG00000174327:ENST00000308027:exon4:c.G1266A:p.G422G	NA	NA	17p13.1	NA	NA	NA	NA	rs4796576	0.61	0.61	0.616	0.559704	0.667	0.7758	0.4784	0.4213	0.4714	0.67	0.76	0.5	0.44	0.616	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.361312	NA	NA	0.670349	0.456423	NA	0.435	NA	3.7133176
1281	4	110454861	110454861	C	G	intronic	SEC24B	NA	NA	NA	intronic	ENSG00000138802	NA	NA	NA	NA	NA	4q25	NA	NA	NA	NA	rs34133579	0.04	0.04	0.055	0.0497204	0.0934	NA	0.0519	0.0287	0.0828	0.09	NA	0.06	0.02	0.086	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.644245	NA	NA	0.107327	0.039401	NA	0.08	NA	3.713273
1281	2	28827644	28827644	A	G	intronic	PLB1	NA	NA	NA	intronic	ENSG00000163803	NA	NA	NA	NA	NA	2p23.2	NA	NA	NA	NA	rs36116681	0.06	0.06	0.049	0.038139	0.1054	NA	0.0634	0.0061	0.0337	0.11	NA	0.09	0.01	0.0739	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.511413	NA	NA	0.107442	0.020881	NA	0.007	NA	3.713258
1281	22	50901259	50901259	G	C	intronic	SBF1	NA	NA	NA	intronic	ENSG00000100241	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs9617014	0.21	0.21	NA	0.135982	0.1461	0.2758	0.1931	0.0613	0.0419	0.2	0.31	0.23	0.09	0.1407	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.568401	NA	NA	NA	NA	NA	0.08	NA	3.7132
1281	16	69458779	69458779	G	A	intronic	CYB5B	NA	NA	NA	intronic	ENSG00000103018	NA	NA	NA	NA	NA	16q22.1	NA	Name=ETS1,IRF4_(M-17),Pol2,ELK4	NA	NA	rs1619397	0.36	0.36	0.33	0.324281	0.4523	0.2569	0.4683	0.1891	0.3425	0.45	0.26	0.48	0.24	0.4048	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.86872	2.86872	NA	0.429734	0.210227	NA	0.326	NA	3.713166
1281	2	37255806	37255806	C	T	intronic	HEATR5B	NA	NA	NA	intronic	ENSG00000008869	NA	NA	NA	NA	NA	2p22.2	NA	NA	NA	NA	rs17020143	0.19	0.19	0.182	0.175519	0.0815	0.5188	0.1614	0.0068	0.1564	0.08	0.52	0.13	0.0041	0.1294	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.544278	NA	NA	0.076047	0.020436	ID=COSN166067;OCCURENCE=1(breast)	0.13	NA	3.713053
1281	14	95898487	95898487	G	A	intronic	SYNE3	NA	NA	NA	intronic	ENSG00000176438	NA	NA	NA	NA	NA	14q32.13	NA	NA	Name=66	NA	rs1187747	NA	NA	NA	0.428714	0.6342	0.2867	0.366	0.326	0.547	NA	NA	NA	NA	0.6528	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.807392	NA	NA	NA	NA	NA	0.5	NA	3.713
1281	3	30032530	30032530	A	G	intronic	RBMS3	NA	NA	NA	intronic	ENSG00000144642	NA	NA	NA	NA	NA	3p24.1	NA	NA	NA	NA	rs2197896	0.32	0.32	0.324	0.380192	0.0507	0.3423	0.268	0.8048	0.2638	0.05	0.33	0.25	0.79	0.1839	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.721244	NA	NA	0.052558	0.6936	ID=COSN166833;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.275	NA	3.712842
1281	1	31418119	31418119	C	T	intronic	PUM1	NA	NA	NA	intronic	ENSG00000134644	NA	NA	NA	NA	NA	1p35.2	NA	NA	NA	NA	rs12142833	0.2	0.2	0.176	0.194089	0.2873	0.004	0.33	0.177	0.2209	0.29	0.0035	0.31	0.19	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.139585	NA	NA	NA	NA	NA	0.261	NA	3.7127
1281	6	13794044	13794044	T	C	intronic	MCUR1	NA	NA	NA	intronic	ENSG00000050393	NA	NA	NA	NA	NA	6p23	NA	NA	NA	NA	rs6922822	0.32	0.32	0.323	0.311901	0.2873	0.3849	0.2017	0.3759	0.2536	0.29	0.38	0.22	0.37	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.337226	NA	NA	NA	NA	NA	0.319	NA	3.7127
1281	6	160663230	160663230	T	C	intronic	SLC22A2	NA	NA	NA	intronic	ENSG00000112499	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs17588242	0.14	0.14	0.123	0.107228	0.2873	0.001	0.1715	0.0189	0.1053	0.29	NA	0.2	0.03	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.724345	NA	NA	NA	NA	NA	0.123	NA	3.7127
1281	7	35050227	35050227	C	T	intronic	DPY19L1	NA	NA	NA	intronic	ENSG00000173852	NA	NA	NA	NA	NA	7p14.2	NA	NA	NA	NA	rs328939	0.22	0.22	0.185	0.217652	0.2873	0.1329	0.2536	0.2057	0.2239	0.27	0.13	0.26	0.22	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.178949	NA	NA	NA	NA	NA	0.297	NA	3.7127
1281	7	50694429	50694429	G	A	intronic	GRB10	NA	NA	NA	intronic	ENSG00000106070	NA	NA	NA	NA	NA	7p12.1	NA	NA	NA	NA	rs2074778	0.39	0.39	0.395	0.403954	0.2873	0.378	0.3602	0.6089	0.3047	0.28	0.36	0.36	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.928336	NA	NA	NA	NA	NA	0.42	NA	3.7127
1281	7	134878237	134878237	G	C	intronic	WDR91	NA	NA	NA	intronic	ENSG00000105875	NA	NA	NA	NA	NA	7q33	NA	NA	NA	NA	rs2278128	0.23	0.23	0.213	0.228235	0.2873	0.1776	0.1412	0.3041	0.1789	0.28	0.17	0.15	0.28	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.435358	NA	NA	NA	NA	NA	0.203	NA	3.7127
1281	15	75692303	75692303	A	C	intronic	SIN3A	NA	NA	NA	intronic	ENSG00000169375	NA	NA	NA	NA	NA	15q24.2	NA	NA	NA	NA	rs4886699	0.41	0.41	0.433	0.416134	0.2873	0.4444	0.255	0.5915	0.3967	0.27	0.49	0.29	0.62	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.119058	NA	NA	NA	NA	NA	0.319	NA	3.7127
1281	21	41143246	41143246	G	C	intronic	IGSF5	NA	NA	NA	intronic	ENSG00000183067	NA	NA	NA	NA	NA	21q22.2	NA	NA	NA	NA	rs62237180	0.13	0.13	0.097	0.101637	0.2873	NA	0.1412	0.0121	0.1084	0.27	NA	0.16	0.02	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.225268	NA	NA	NA	NA	NA	0.13	NA	3.7127
1281	22	24158899	24158899	C	A	intronic	SMARCB1	NA	NA	NA	intronic	ENSG00000099956	NA	NA	NA	NA	NA	22q11.23	NA	NA	NA	NA	rs2070457	0.31	0.31	0.329	0.271366	0.2873	0.3185	0.2334	0.3306	0.1534	0.31	0.33	0.23	0.35	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.275553	NA	NA	NA	NA	NA	0.355	NA	3.7127
1281	21	44515504	44515504	T	C	intronic	U2AF1	NA	NA	NA	intronic	ENSG00000160201	NA	NA	NA	NA	NA	21q22.3	NA	Name=Pol2,Pol2(b),Pol2-4H8	NA	NA	rs4920040	0.37	0.37	0.375	0.375799	0.4046	0.0873	0.536	0.5514	0.2924	0.39	0.1	0.51	0.55	0.4234	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.782692	NA	NA	0.459651	0.533591	NA	0.493	NA	3.712349
1281	7	20420270	20420270	T	A	intronic	ITGB8	NA	NA	NA	intronic	ENSG00000105855	NA	NA	NA	NA	NA	7p21.1	NA	NA	NA	NA	rs17142761	0.18	0.18	0.176	0.154952	0.0845	0.4048	0.072	0.0991	0.1043	0.09	0.41	0.09	0.11	0.1161	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.230285	NA	NA	0.087209	0.118475	NA	0.123	NA	3.712191
1281	3	187440506	187440506	C	A	ncRNA_intronic	LOC100131635	NA	NA	NA	intronic	ENSG00000113916,ENSG00000228804	NA	NA	NA	NA	NA	3q27.3	NA	NA	NA	NA	rs1005099	0.54	0.54	0.478	0.502796	0.6213	0.7411	0.5893	0.0666	0.6636	0.61	0.78	0.59	0.12	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.1862	NA	NA	NA	NA	NA	0.551	NA	3.7120333
1281	5	172512686	172512686	C	T	intronic	CREBRF	NA	NA	NA	ncRNA_intronic	ENSG00000253439	NA	NA	NA	NA	NA	5q35.1	NA	NA	NA	NA	rs671387	0.42	0.42	0.344	0.361422	0.6213	0.1706	0.4193	0.3011	0.3313	0.63	0.16	0.47	0.35	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.443296	NA	NA	NA	NA	NA	0.312	NA	3.7120333
1281	12	57493727	57493727	T	G	intronic	STAT6	NA	NA	NA	intronic	ENSG00000166888	NA	NA	NA	NA	NA	12q13.3	NA	NA	NA	NA	rs3024971	0.08	0.08	0.078	0.0684904	0.1074	0.0873	0.0893	0.0348	0.0399	0.1	0.06	0.11	0.06	0.0773	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.000334	NA	NA	0.103488	0.04562	NA	0.036	NA	3.711812
1281	1	26887150	26887150	A	G	intronic	RPS6KA1	NA	NA	NA	intronic	ENSG00000117676	NA	NA	NA	NA	NA	1p36.11	NA	NA	NA	NA	rs34062688	0.47	0.47	0.465	0.511382	0.2883	0.7599	0.366	0.5083	0.592	0.29	0.74	0.35	0.5	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.216004	NA	NA	NA	NA	NA	0.384	NA	3.7117
1281	2	27449293	27449293	C	G	intronic	CAD	NA	NA	NA	intronic	ENSG00000084774	NA	NA	NA	NA	NA	2p23.3	NA	NA	NA	NA	rs7593448	0.39	0.39	0.411	0.473243	0.2883	0.1498	0.4726	0.9047	0.4141	0.28	0.11	0.42	0.89	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.010425	NA	NA	NA	NA	NA	0.551	NA	3.7117
1281	2	47612224	47612224	C	T	intronic	EPCAM	NA	NA	NA	intronic	ENSG00000119888	NA	NA	NA	NA	NA	2p21	NA	NA	NA	NA	rs7584256	0.37	0.37	0.376	0.360823	0.2883	0.5615	0.2666	0.3525	0.3067	0.29	0.54	0.25	0.37	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.321912	NA	NA	NA	NA	NA	0.312	NA	3.7117
1281	2	118575468	118575468	C	T	intronic	DDX18	NA	NA	NA	intronic	ENSG00000088205	NA	NA	NA	NA	NA	2q14.1	NA	NA	NA	NA	rs6737733	0.3	0.3	0.289	0.348642	0.2883	0.1726	0.2262	0.5378	0.4233	0.28	0.15	0.24	0.53	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.148042	NA	NA	NA	NA	NA	0.413	NA	3.7117
1281	4	186559109	186559109	T	C	intronic	SORBS2	NA	NA	NA	intronic	ENSG00000154556	NA	NA	NA	NA	NA	4q35.1	NA	NA	NA	NA	rs2306707	0.21	0.21	0.193	0.188498	0.2883	0.123	0.2637	0.1838	0.1063	0.28	0.1	0.27	0.18	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.280416	NA	NA	NA	NA	NA	0.181	NA	3.7117
1281	5	176895030	176895030	C	T	intronic	DBN1	NA	NA	NA	intronic	ENSG00000113758	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs28557366	0.19	0.19	0.139	0.156749	0.2883	0.0734	0.1715	0.1339	0.1278	0.29	0.06	0.2	0.17	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.220609	NA	NA	NA	NA	NA	NA	NA	3.7117
1281	16	69356695	69356695	A	G	intronic	VPS4A	NA	NA	NA	intronic	ENSG00000132612	NA	NA	NA	NA	NA	16q22.1	NA	NA	NA	NA	rs11075714	0.24	0.24	0.227	0.283147	0.2883	0.0853	0.2767	0.3805	0.3548	0.27	0.1	0.26	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.548771	NA	NA	NA	NA	NA	0.181	NA	3.7117
1281	19	1792190	1792190	A	C	intronic	ATP8B3	NA	NA	NA	intronic	ENSG00000130270	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs2286004	0.34	0.34	0.303	0.330072	0.2883	0.4534	0.3084	0.2776	0.3323	0.29	0.45	0.3	0.33	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.438873	NA	NA	NA	NA	NA	0.254	NA	3.7117
1281	5	149914401	149914401	T	C	intronic	NDST1	NA	NA	NA	intronic	ENSG00000070614	NA	NA	NA	NA	NA	5q33.1	NA	NA	Name=7	NA	rs2545341	0.68	0.68	0.677	NA	NA	NA	NA	NA	NA	0.65	0.65	0.68	0.77	0.658	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.167356	NA	NA	0.630581	0.750567	ID=COSN167614;OCCURENCE=1(large_intestine)	0.616	NA	3.711419
1281	1	205814695	205814695	A	G	intronic	PM20D1	NA	NA	NA	intronic	ENSG00000162877	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs71633564	0.16	0.16	0.157	0.160543	0.1004	0.4206	0.0634	0.0514	0.1708	0.1	0.42	0.06	0.04	0.11	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.647025	3.647025	NA	0.078372	0.061053	NA	0.087	NA	3.711228
1281	11	26692811	26692811	C	G	intronic	SLC5A12	NA	NA	NA	intronic	ENSG00000148942	NA	NA	NA	NA	NA	11p14.2	NA	NA	NA	NA	rs7128731	0.12	0.12	0.119	0.146965	0.0954	0.1438	0.0937	0.2035	0.1646	0.1	0.1	0.09	0.21	0.1102	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.280983	1.280983	NA	0.083476	0.172144	NA	0.058	NA	3.710924
1281	5	127636485	127636485	C	T	intronic	FBN2	NA	NA	NA	intronic	ENSG00000138829	NA	NA	NA	NA	NA	5q23.3	NA	NA	NA	NA	rs28763934	0.08	0.08	0.081	0.0814696	0.0954	0.0655	0.0663	0.0613	0.1217	0.09	0.06	0.09	0.08	0.0906	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.840878	1.840878	NA	0.10314	0.064685	NA	0.065	NA	3.71086
1281	7	130144943	130144943	G	C	UTR3	MEST	NM_177524:c.*46G>C,NM_001253901:c.*46G>C,NM_001253902:c.*46G>C,NM_177525:c.*46G>C,NM_002402:c.*46G>C,NM_001253900:c.*46G>C	NA	NA	UTR3	ENSG00000106484	ENST00000341441:c.*46G>C,ENST00000378576:c.*46G>C,ENST00000416162:c.*46G>C,ENST00000393187:c.*46G>C,ENST00000223215:c.*46G>C,ENST00000437945:c.*99G>C,ENST00000463263:c.*46G>C	NA	NA	Score=433;Name=lod=77	NA	7q32.2	NA	NA	NA	NA	rs1050582	0.48	0.48	0.43	0.466254	0.5547	0.6121	0.5519	0.2126	0.5072	0.52	0.62	0.51	0.21	0.5163	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.068098	2.068098	NA	0.551512	0.270767	NA	0.471	NA	3.7108214
1281	2	48685417	48685417	T	C	intronic	PPP1R21	NA	NA	NA	intronic	ENSG00000162869	NA	NA	NA	NA	NA	2p16.3	NA	NA	NA	NA	rs75289760	0.05	0.05	0.048	0.0305511	0.1103	NA	0.0476	0.0023	0.0061	0.12	NA	0.07	0.002	0.0747	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.316518	NA	NA	0.104186	0.024739	NA	0.022	NA	3.710814
1281	1	210686614	210686614	A	G	intronic	HHAT	NA	NA	NA	intronic	ENSG00000054392	NA	NA	NA	NA	NA	1q32.2	NA	NA	NA	NA	rs12142231	0.08	0.08	0.084	0.104233	0.1392	0.0823	0.0764	0.0083	0.2403	0.14	0.08	0.08	0.01	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.373376	NA	NA	0.150095	0.026734	NA	0.145	NA	3.710705
1281	1	205768309	205768309	C	T	intronic	SLC41A1	NA	NA	NA	intronic	ENSG00000133065	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs4396169	0.28	0.28	0.271	0.28774	0.2893	0.499	0.1931	0.0711	0.4284	0.29	0.5	0.17	0.1	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.520159	3.520159	NA	NA	NA	NA	0.203	NA	3.7107
1281	2	8910717	8910717	T	C	intronic	KIDINS220	NA	NA	NA	intronic	ENSG00000134313	NA	NA	NA	NA	NA	2p25.1	NA	NA	NA	NA	rs10929557	0.26	0.26	0.273	0.267372	0.2893	0.1736	0.2579	0.329	0.2648	0.29	0.17	0.25	0.31	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.535862	2.535862	NA	NA	NA	NA	0.399	NA	3.7107
1281	2	28821739	28821739	T	G	intronic	PLB1	NA	NA	NA	intronic	ENSG00000163803	NA	NA	NA	NA	NA	2p23.2	NA	NA	NA	NA	rs7573845	0.3	0.3	0.272	0.275759	0.2893	0.4028	0.2305	0.1831	0.2883	0.3	0.39	0.22	0.23	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.144989	NA	NA	NA	NA	NA	0.326	NA	3.7107
1281	3	170724883	170724883	T	C	intronic	SLC2A2	NA	NA	NA	intronic	ENSG00000163581	NA	NA	NA	NA	NA	3q26.2	NA	NA	NA	NA	rs8192675	0.39	0.39	0.433	0.41234	0.2893	0.2361	0.3127	0.7867	0.2853	0.29	0.24	0.33	0.77	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.929497	NA	NA	NA	NA	NA	0.507	NA	3.7107
1281	6	42890602	42890602	A	G	intronic	PTCRA	NA	NA	NA	intronic	ENSG00000171611	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs9462851	0.23	0.23	0.25	0.240615	0.2893	0.0238	0.2133	0.4002	0.2178	0.28	0.03	0.23	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.335158	1.335158	NA	NA	NA	NA	0.254	NA	3.7107
1281	7	105122960	105122960	T	C	intronic	PUS7	NA	NA	NA	intronic	ENSG00000091127	NA	NA	NA	NA	NA	7q22.3	NA	NA	NA	NA	rs818468	0.3	0.3	0.279	0.340056	0.2893	0.1329	0.281	0.5363	0.3824	0.31	0.11	0.28	0.5	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.475052	NA	NA	NA	NA	NA	0.326	NA	3.7107
1281	7	157931263	157931263	G	C	intronic	PTPRN2	NA	NA	NA	intronic	ENSG00000155093	NA	NA	NA	NA	NA	7q36.3	NA	NA	NA	NA	rs3752371	0.37	0.37	0.351	0.334265	0.2893	0.4663	0.428	0.3048	0.2178	0.29	0.53	0.36	0.32	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.137649	NA	NA	NA	NA	NA	0.355	NA	3.7107
1281	9	140693181	140693181	G	A	intronic	EHMT1	NA	NA	NA	intronic	ENSG00000181090	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs4876947	0.25	0.25	0.228	0.258986	0.2893	0.126	0.4784	0.1573	0.3466	0.29	0.12	0.49	0.18	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.489822	NA	NA	NA	NA	NA	0.355	NA	3.7107
1281	11	62098726	62098726	C	T	intergenic	SCGB1D4,ASRGL1	dist=32190;dist=6048	NA	NA	ncRNA_exonic	ENSG00000255213	NA	NA	NA	NA	NA	11q12.3	NA	NA	NA	NA	rs7130122	0.27	0.27	0.256	0.282348	0.2893	0.2331	0.2752	0.2526	0.3712	0.29	0.27	0.25	0.26	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.907877	NA	NA	NA	NA	NA	0.268	NA	3.7107
1281	11	62099066	62099066	G	A	intergenic	SCGB1D4,ASRGL1	dist=32530;dist=5708	NA	NA	ncRNA_exonic	ENSG00000255213	NA	NA	NA	NA	NA	11q12.3	NA	NA	NA	NA	rs12283977	0.27	0.27	0.244	0.282348	0.2893	0.2331	0.2752	0.2526	0.3712	0.29	0.27	0.25	0.26	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.419567	NA	NA	NA	NA	NA	0.268	NA	3.7107
1281	19	17317252	17317252	A	G	intronic	MYO9B	NA	NA	NA	intronic	ENSG00000099331	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs2279002	0.5	0.5	0.424	0.503794	0.2893	0.745	0.611	0.4493	0.4734	0.3	0.78	0.58	0.43	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.095881	NA	NA	NA	NA	NA	0.58	NA	3.7107
1281	21	47860217	47860217	C	T	intronic	PCNT	NA	NA	NA	intronic	ENSG00000160299	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs2073377	0.28	0.28	0.25	0.292133	0.2893	0.379	0.3458	0.1634	0.3415	0.28	0.34	0.33	0.18	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.169561	NA	NA	NA	NA	NA	0.239	NA	3.7107
1281	12	124177289	124177289	T	C	intronic	TCTN2	NA	NA	NA	intronic	ENSG00000168778	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs7137946	0.41	0.41	0.418	0.445487	0.4175	0.1498	0.3444	0.7481	0.4417	0.42	0.12	0.36	0.74	0.4281	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.196997	NA	NA	0.443721	0.716977	NA	0.37	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000114224.2;CLNDSDB=.;CLNDSDBID=.	3.710679
1281	7	154587512	154587512	G	A	intronic	DPP6	NA	NA	NA	intronic	ENSG00000130226	NA	NA	NA	NA	NA	7q36.2	NA	NA	NA	NA	rs66486366	NA	NA	0.045	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2896	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.884489	NA	NA	NA	NA	NA	0.014	NA	3.7104
1281	11	120007889	120007889	G	T	intronic	TRIM29	NA	NA	NA	intronic	ENSG00000137699	NA	NA	NA	NA	NA	11q23.3	NA	NA	Name=4	NA	rs470645	0.4	0.4	0.374	0.402556	0.4274	0.244	0.4179	0.5091	0.3855	0.42	0.27	0.45	0.48	0.4376	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.267604	NA	NA	0.424662	0.495913	NA	0.522	NA	3.710338
1281	1	115112597	115112597	A	T	intronic	BCAS2	NA	NA	NA	intronic	ENSG00000116752	NA	NA	NA	NA	NA	1p13.2	NA	NA	NA	NA	rs72698020	0.05	0.05	0.048	0.0519169	0.0944	0.0218	0.0605	0.0076	0.093	0.09	0.02	0.08	0.02	0.0933	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.056487	2.056487	NA	0.102024	0.024069	NA	0.036	NA	3.710276
1281	1	167887642	167887642	C	T	intronic	MPC2	NA	NA	NA	intronic	ENSG00000143158	NA	NA	NA	NA	NA	1q24.2	NA	NA	NA	NA	rs10918798	0.1	0.1	0.093	0.115815	0.1093	0.001	0.0821	0.2738	0.0511	0.1	NA	0.09	0.23	0.091	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.412553	NA	NA	0.089756	0.227811	NA	0.101	NA	3.709944
1281	20	13847420	13847420	A	G	exonic	SEL1L2	NA	synonymous SNV	SEL1L2:NM_001271539:exon15:c.T1332C:p.L444L	exonic	ENSG00000101251	NA	synonymous SNV	ENSG00000101251:ENST00000284951:exon15:c.T1332C:p.L444L,ENSG00000101251:ENST00000378072:exon15:c.T1332C:p.L444L	NA	NA	20p12.1	Score=861;Name=V$YY1_01	NA	NA	NA	rs660710	1	1	0.996	0.993411	0.9831	1	0.9971	0.9932	0.9949	0.99	1	1	1	0.9892	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.090657	NA	NA	0.984619	0.992996	NA	0.978	NA	3.7097476
1281	2	113875753	113875753	C	G	intronic	IL1RN	NA	NA	NA	intronic	ENSG00000136689	NA	NA	NA	NA	NA	2q13	NA	NA	NA	NA	rs4251969	0.18	0.18	0.151	0.185903	0.2903	0.1101	0.3213	0.0174	0.2883	0.29	0.09	0.31	0.02	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.435212	NA	NA	NA	NA	NA	0.232	NA	3.7097
1281	2	113875773	113875773	A	G	intronic	IL1RN	NA	NA	NA	intronic	ENSG00000136689	NA	NA	NA	NA	NA	2q13	NA	NA	NA	NA	rs4251970	0.18	0.18	0.152	0.186102	0.2903	0.1101	0.3228	0.0174	0.2883	0.29	0.09	0.31	0.02	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.402532	NA	NA	NA	NA	NA	0.232	NA	3.7097
1281	5	98232809	98232809	T	C	intronic	CHD1	NA	NA	NA	intronic	ENSG00000153922	NA	NA	NA	NA	NA	5q21.1	NA	NA	NA	NA	rs326468	0.3	0.3	0.329	0.303115	0.2903	0.0427	0.2392	0.6331	0.184	0.28	0.05	0.27	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.793534	NA	NA	NA	NA	NA	0.37	NA	3.7097
1281	7	47920483	47920483	G	T	intronic	PKD1L1	NA	NA	NA	intronic	ENSG00000136273,ENSG00000158683	NA	NA	NA	NA	NA	7p12.3	NA	NA	NA	NA	rs79012260	0.25	0.25	NA	0.335663	0.2903	0.0942	0.3473	0.5673	0.3098	0.23	0.07	0.31	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.182793	NA	NA	NA	NA	NA	NA	NA	3.7097
1281	3	52847544	52847544	C	A	intronic	ITIH4	NA	NA	NA	intronic	ENSG00000055955,ENSG00000243696	NA	NA	NA	NA	NA	3p21.1	NA	NA	NA	NA	rs17331178	0.07	0.07	0.055	0.0523163	0.1014	0.0437	0.1066	0.0106	0.0286	0.11	0.04	0.13	0.01	0.0812	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.339484	NA	NA	0.107791	0.021562	NA	0.138	NA	3.709609
1281	13	20025375	20025375	A	G	intronic	TPTE2	NA	NA	NA	intronic	ENSG00000132958	NA	NA	NA	NA	NA	13q12.11	NA	NA	NA	NA	rs4554999	0.1	0.1	0.073	0.0960463	0.1123	0.0704	0.0648	0.1505	0.0542	0.11	0.05	0.07	0.15	0.0904	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.540394	NA	NA	0.087811	0.150477	NA	0.217	NA	3.709489
1281	7	16505341	16505341	T	C	UTR5	SOSTDC1	NM_015464:c.-48A>G	NA	NA	UTR5	ENSG00000171243	ENST00000307068:c.-48A>G,ENST00000396652:c.-48A>G	NA	NA	Score=696;Name=lod=896	NA	7p21.1	NA	NA	Name=58	NA	rs6945425	0.9	0.9	0.891	0.88119	0.8807	0.9018	0.9236	0.8888	0.82	0.88	0.93	0.92	0.87	0.8788	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.098893	NA	NA	0.864419	0.900136	NA	0.928	NA	3.7094144
1281	14	25101706	25101706	G	T	intronic	GZMB	NA	NA	NA	ncRNA_intronic	ENSG00000258657	NA	NA	NA	NA	NA	14q12	NA	NA	NA	NA	rs10873219	0.19	0.19	0.194	0.209665	0.2227	0.1925	0.1657	0.2027	0.2546	0.22	0.16	0.17	0.17	0.1991	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.345804	NA	NA	0.202326	0.200862	NA	0.203	NA	3.7092073
1281	21	19167479	19167479	T	C	intronic	C21orf91	NA	NA	NA	ncRNA_intronic	ENSG00000244676	NA	NA	NA	NA	NA	21q21.1	NA	NA	NA	NA	rs2258119	0.28	0.28	0.297	0.282348	0.1948	0.3988	0.2594	0.3336	0.1994	0.2	0.38	0.24	0.33	0.2265	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.074522	NA	NA	0.202861	0.312704	NA	0.377	NA	3.7091723
1281	17	73279624	73279624	A	G	exonic	SLC25A19	NA	synonymous SNV	SLC25A19:NM_001126122:exon4:c.T339C:p.Y113Y,SLC25A19:NM_001126121:exon5:c.T339C:p.Y113Y,SLC25A19:NM_021734:exon5:c.T339C:p.Y113Y	exonic	ENSG00000125454	NA	synonymous SNV	ENSG00000125454:ENST00000402418:exon3:c.T339C:p.Y113Y,ENSG00000125454:ENST00000580273:exon3:c.T36C:p.Y12Y,ENSG00000125454:ENST00000442286:exon4:c.T339C:p.Y113Y,ENSG00000125454:ENST00000416858:exon5:c.T339C:p.Y113Y,ENSG00000125454:ENST00000579207:exon5:c.T339C:p.Y113Y,ENSG00000125454:ENST00000580151:exon5:c.T339C:p.Y113Y,ENSG00000125454:ENST00000580994:exon5:c.T339C:p.Y113Y,ENSG00000125454:ENST00000583332:exon5:c.T339C:p.Y113Y,ENSG00000125454:ENST00000320362:exon6:c.T339C:p.Y113Y	NA	NA	17q25.1	NA	NA	NA	NA	rs7213318	0.91	0.91	0.908	0.889577	0.999	0.9008	0.9236	0.7579	0.9192	1	0.94	0.93	0.73	0.9617	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.017272	NA	NA	0.99686	0.817295	NA	0.877	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000118368.2;CLNDSDB=.;CLNDSDBID=.	3.7091066
1281	17	41006760	41006760	G	A	intronic	AOC3	NA	NA	NA	intronic	ENSG00000131471	NA	NA	NA	NA	NA	17q21.31	NA	NA	NA	NA	rs34908272	0.05	0.05	0.06	0.048722	0.1133	NA	0.0504	0.0091	0.0849	0.12	NA	0.06	0.02	0.0792	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.017172	NA	NA	0.09841	0.021223	NA	0.109	NA	3.70909
1281	3	183777210	183777210	C	T	intronic	HTR3C	NA	NA	NA	intronic	ENSG00000178084	NA	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs56244916	0.06	0.06	0.057	0.0593051	0.1093	0.0169	0.062	0.034	0.0838	0.11	0.02	0.06	0.02	0.0845	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.783344	NA	NA	0.097442	0.048343	NA	0.051	NA	3.708758
1281	6	29769280	29769280	C	T	intergenic	LOC554223,HLA-G	dist=3696;dist=25476	NA	NA	ncRNA_exonic	ENSG00000261548	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs1610653	0.31	0.31	0.346	0.341853	0.2913	0.1875	0.2983	0.5113	0.3548	0.28	0.22	0.28	0.48	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.438714	NA	NA	NA	NA	NA	0.362	NA	3.7087
1281	7	150444383	150444383	T	G	intergenic	GIMAP1-GIMAP5,TMEM176B	dist=3646;dist=43993	NA	NA	ncRNA_exonic	ENSG00000177590	NA	NA	NA	NA	NA	7q36.1	NA	NA	NA	NA	rs6972456	0.27	0.27	0.249	0.302316	0.2913	0.0883	0.2579	0.4448	0.3732	0.28	0.1	0.28	0.45	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.180414	NA	NA	NA	NA	NA	0.333	NA	3.7087
1281	9	107581749	107581749	A	C	intronic	ABCA1	NA	NA	NA	intronic	ENSG00000165029	NA	NA	NA	NA	NA	9q31.1	NA	NA	NA	NA	rs2254884	0.3	0.3	0.291	0.283347	0.2913	0.5724	0.2507	0.0779	0.2781	0.26	0.53	0.27	0.09	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.729458	NA	NA	NA	NA	NA	0.261	NA	3.7087
1281	11	76750406	76750406	A	C	intronic	B3GNT6	NA	NA	NA	intronic	ENSG00000198488	NA	NA	NA	NA	NA	11q13.5	NA	NA	NA	NA	rs12422079	0.29	0.29	0.294	0.258586	0.2913	0.2212	0.2421	0.351	0.1503	0.27	0.24	0.28	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.39208	NA	NA	NA	NA	NA	0.225	NA	3.7087
1281	12	111296320	111296320	A	G	intronic	CCDC63	NA	NA	NA	intronic	ENSG00000173093	NA	NA	NA	NA	NA	12q24.11	NA	NA	NA	NA	rs11065734	0.29	0.29	0.257	0.28754	0.2913	0.496	0.232	0.0658	0.408	0.29	0.5	0.27	0.07	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.396252	NA	NA	NA	NA	NA	0.239	NA	3.7087
1281	14	24772829	24772829	A	T	intronic	NOP9	NA	NA	NA	intronic	ENSG00000196943	NA	NA	NA	NA	NA	14q12	NA	NA	NA	NA	rs4981501	0.4	0.4	0.38	0.439896	0.2913	0.7173	0.2695	0.3411	0.5613	0.28	0.69	0.3	0.31	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.139487	NA	NA	NA	NA	NA	0.268	NA	3.7087
1281	21	42710175	42710175	T	C	intronic	FAM3B	NA	NA	NA	intronic	ENSG00000183844	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs2158354	0.35	0.35	0.339	0.347444	0.2913	0.2044	0.3199	0.6097	0.2178	0.29	0.22	0.34	0.63	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.510136	NA	NA	NA	NA	NA	0.442	NA	3.7087
1281	22	24982522	24982522	A	T	intronic	FAM211B,GGT1	NA	NA	NA	intronic	ENSG00000100028,ENSG00000100031,ENSG00000178026	NA	NA	NA	NA	NA	22q11.23	NA	NA	NA	NA	rs9612662	0.28	0.28	0.254	0.265176	0.2913	0.5367	0.2536	0.0265	0.2894	0.3	0.49	0.25	0.03	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.312487	NA	NA	NA	NA	NA	0.217	NA	3.7087
1281	4	154553833	154553833	A	G	intronic	KIAA0922	NA	NA	NA	intronic	ENSG00000121210	NA	NA	NA	NA	NA	4q31.3	NA	NA	NA	NA	rs41280471	0.09	0.09	0.073	0.10643	0.0696	0.1508	0.1369	0.0174	0.1973	0.09	0.14	0.13	0.02	0.1122	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.106858	NA	NA	0.110116	0.028143	NA	0.043	NA	3.708084
1281	11	94113288	94113288	C	G	UTR3	GPR83	NM_016540:c.*27G>C	NA	NA	UTR3	ENSG00000123901	ENST00000243673:c.*27G>C,ENST00000539203:c.*27G>C	NA	NA	NA	NA	11q21	NA	NA	NA	NA	rs3740867	0.14	0.14	0.117	0.119409	0.2078	0.1726	0.1441	0.0136	0.0992	0.21	0.15	0.16	0.01	0.1883	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.568045	NA	NA	0.229293	0.040663	NA	0.138	NA	3.7079404
1281	13	50098376	50098376	G	T	intronic	PHF11	NA	NA	NA	intronic	ENSG00000136147	NA	NA	NA	NA	NA	13q14.2	NA	NA	NA	NA	rs7332573	0.2	0.2	0.207	0.240216	0.0805	0.2431	0.0836	0.4032	0.2924	0.08	0.23	0.12	0.4	0.1401	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.213544	NA	NA	0.071478	0.320618	NA	0.348	NA	3.707922
1281	2	70933636	70933636	T	C	intronic	ADD2	NA	NA	NA	intronic	ENSG00000075340	NA	NA	NA	NA	NA	2p13.3	NA	NA	NA	NA	rs2287096	0.43	0.43	0.404	0.437899	0.2922	0.4375	0.3184	0.6936	0.3272	0.3	0.4	0.36	0.72	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.760991	NA	NA	NA	NA	NA	0.449	NA	3.7078
1281	2	113887338	113887338	A	C	intronic	IL1RN	NA	NA	NA	intronic	ENSG00000136689	NA	NA	NA	NA	NA	2q13	NA	NA	NA	NA	rs495410	0.18	0.18	0.151	0.191693	0.2922	0.0942	0.3314	0.0333	0.3037	0.29	0.08	0.33	0.04	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.571246	NA	NA	NA	NA	NA	0.246	NA	3.7078
1281	2	113888793	113888793	A	T	intronic	IL1RN	NA	NA	NA	intronic	ENSG00000136689	NA	NA	NA	NA	NA	2q13	NA	NA	NA	NA	rs454078	0.19	0.19	0.151	0.190895	0.2922	0.0942	0.3329	0.031	0.3016	0.29	0.08	0.34	0.04	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.444217	NA	NA	NA	NA	NA	0.239	NA	3.7078
1281	2	234375944	234375944	C	T	intronic	DGKD	NA	NA	NA	intronic	ENSG00000077044	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs2305540	0.3	0.3	0.271	0.310503	0.2922	0.4018	0.3818	0.1248	0.4356	0.29	0.43	0.37	0.12	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.128701	NA	NA	NA	NA	NA	0.275	NA	3.7078
1281	4	123333671	123333671	A	G	intronic	ADAD1	NA	NA	NA	intronic	ENSG00000164113	NA	NA	NA	NA	NA	4q27	NA	NA	NA	NA	rs2086346	0.24	0.24	0.217	0.269768	0.2922	0.3224	0.2997	0.0272	0.499	0.3	0.31	0.3	0.04	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.265584	NA	NA	NA	NA	NA	0.188	NA	3.7078
1281	10	120354818	120354818	C	T	intronic	PRLHR	NA	NA	NA	intronic	ENSG00000119973	NA	NA	NA	NA	NA	10q26.11	NA	NA	NA	NA	rs3740551	0.3	0.3	0.295	0.333466	0.2922	0.38	0.2666	0.2595	0.4755	0.3	0.36	0.26	0.25	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.551373	NA	NA	NA	NA	NA	0.283	NA	3.7078
1281	17	72843923	72843923	G	A	intronic	GRIN2C	NA	NA	NA	intronic	ENSG00000161509	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs3744192	0.24	0.24	0.22	0.21266	0.2922	0.379	0.1628	0.0136	0.2638	0.3	0.4	0.17	0.01	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.910898	NA	NA	NA	NA	NA	0.174	NA	3.7078
1281	19	8167873	8167873	A	G	intronic	FBN3	NA	NA	NA	intronic	ENSG00000142449	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs56921504	0.31	0.31	0.248	0.330272	0.2922	0.5179	0.2839	0.1089	0.5082	0.29	0.51	0.29	0.1	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.930958	NA	NA	NA	NA	NA	0.333	NA	3.7078
1281	1	151143166	151143166	C	T	intronic	TMOD4	NA	NA	NA	intronic	ENSG00000163157	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs6689566	0.08	0.08	0.084	0.0652955	0.1093	0.001	0.0403	0.1324	0.0133	0.11	NA	0.04	0.14	0.0794	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.079244	NA	NA	0.103605	0.147753	NA	0.116	NA	3.707695
1281	7	100552311	100552311	C	T	intergenic	ACHE,MUC12	dist=58770;dist=60593	NA	NA	exonic	ENSG00000169894	NA	synonymous SNV	ENSG00000169894:ENST00000319509:exon1:c.C1062T:p.T354T	NA	NA	7q22.1	NA	NA	NA	NA	rs12535515	NA	NA	NA	0.155751	0.2674	0.1706	0.1628	0.0318	0.1881	NA	NA	NA	NA	0.5257	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.239544	NA	NA	NA	NA	NA	0.355	NA	3.7069
1281	1	109394125	109394125	G	A	intronic	AKNAD1	NA	NA	NA	intronic	ENSG00000162641	NA	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	rs4970815	0.25	0.25	0.236	0.22524	0.2932	0.2173	0.2147	0.1679	0.2485	0.31	0.23	0.23	0.17	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.019151	NA	NA	NA	NA	NA	0.225	NA	3.7068
1281	2	29244889	29244889	A	C	intronic	FAM179A	NA	NA	NA	intronic	ENSG00000189350	NA	NA	NA	NA	NA	2p23.2	NA	NA	NA	NA	rs62130298	0.27	0.27	0.256	0.312101	0.2932	0.1508	0.3055	0.4145	0.364	0.28	0.13	0.29	0.38	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.276939	NA	NA	NA	NA	NA	0.333	NA	3.7068
1281	7	47915890	47915890	C	T	intronic	PKD1L1	NA	NA	NA	intronic	ENSG00000136273,ENSG00000158683	NA	NA	NA	NA	NA	7p12.3	NA	NA	NA	NA	rs4724656	0.31	0.31	0.312	0.345447	0.2932	0.0962	0.3516	0.593	0.317	0.29	0.08	0.35	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.523563	NA	NA	NA	NA	NA	0.304	NA	3.7068
1281	7	47915917	47915917	A	G	intronic	PKD1L1	NA	NA	NA	intronic	ENSG00000136273,ENSG00000158683	NA	NA	NA	NA	NA	7p12.3	NA	NA	NA	NA	rs4724657	0.31	0.31	0.312	0.345447	0.2932	0.0962	0.3516	0.593	0.317	0.29	0.08	0.35	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.322628	NA	NA	NA	NA	NA	0.312	NA	3.7068
1281	7	47916950	47916950	A	T	intronic	PKD1L1	NA	NA	NA	intronic	ENSG00000136273,ENSG00000158683	NA	NA	NA	NA	NA	7p12.3	NA	NA	NA	NA	rs2348660	0.31	0.31	0.32	0.345048	0.2932	0.0962	0.3516	0.5915	0.317	0.29	0.08	0.35	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.453751	NA	NA	NA	NA	NA	0.312	NA	3.7068
1281	7	47916960	47916960	G	T	intronic	PKD1L1	NA	NA	NA	intronic	ENSG00000136273,ENSG00000158683	NA	NA	NA	NA	NA	7p12.3	NA	NA	NA	NA	rs2348661	0.31	0.31	0.332	0.345048	0.2932	0.0962	0.3516	0.5915	0.317	0.29	0.08	0.35	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.174179	NA	NA	NA	NA	NA	0.312	NA	3.7068
1281	7	47916995	47916995	T	C	intronic	PKD1L1	NA	NA	NA	intronic	ENSG00000136273,ENSG00000158683	NA	NA	NA	NA	NA	7p12.3	NA	NA	NA	NA	rs2348662	0.31	0.31	0.332	0.345447	0.2932	0.0962	0.3516	0.593	0.317	0.29	0.08	0.35	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.666435	NA	NA	NA	NA	NA	0.21	NA	3.7068
1281	7	47920225	47920225	G	C	intronic	PKD1L1	NA	NA	NA	intronic	ENSG00000136273,ENSG00000158683	NA	NA	NA	NA	NA	7p12.3	NA	NA	NA	NA	rs17131893	0.31	0.31	0.287	0.34365	0.2932	0.0952	0.3516	0.59	0.3129	0.29	0.08	0.35	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.947655	NA	NA	NA	NA	NA	0.29	NA	3.7068
1281	7	47920482	47920482	A	G	intronic	PKD1L1	NA	NA	NA	intronic	ENSG00000136273,ENSG00000158683	NA	NA	NA	NA	NA	7p12.3	NA	NA	NA	NA	rs78574665	0.25	0.25	NA	0.34345	0.2932	0.0952	0.3501	0.59	0.3129	0.23	0.07	0.31	0.44	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.131602	NA	NA	NA	NA	NA	NA	NA	3.7068
1281	7	47920499	47920499	A	G	intronic	PKD1L1	NA	NA	NA	intronic	ENSG00000136273,ENSG00000158683	NA	NA	NA	NA	NA	7p12.3	NA	NA	NA	NA	rs62447082	0.31	0.31	0.301	0.34385	0.2932	0.0952	0.3501	0.59	0.3149	0.29	0.08	0.35	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.768974	NA	NA	NA	NA	NA	0.21	NA	3.7068
1281	7	57199906	57199906	A	G	intronic	ZNF479	NA	NA	NA	intronic	ENSG00000185177	NA	NA	NA	NA	NA	7p11.2	NA	NA	NA	NA	rs3889851	0.36	0.36	0.293	0.346246	0.2932	0.5446	0.3847	0.1793	0.3947	0.3	0.59	0.33	0.2	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.580028	NA	NA	NA	NA	NA	0.29	NA	3.7068
1281	9	6251012	6251012	C	A	intronic	IL33	NA	NA	NA	intronic	ENSG00000137033	NA	NA	NA	NA	NA	9p24.1	NA	NA	NA	NA	rs1317230	0.33	0.33	0.302	0.320687	0.2932	0.4573	0.4236	0.1316	0.3906	0.3	0.48	0.4	0.15	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.230867	NA	NA	NA	NA	NA	0.261	NA	3.7068
1281	9	135982391	135982391	T	C	intronic	RALGDS	NA	NA	NA	intronic	ENSG00000160271	NA	NA	NA	NA	NA	9q34.2	NA	NA	NA	NA	rs2301577	0.22	0.22	0.184	0.177316	0.2932	0.1577	0.3156	0.0802	0.1115	0.29	0.17	0.33	0.1	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.140929	NA	NA	NA	NA	NA	0.174	NA	3.7068
1281	17	49060107	49060107	T	G	intronic	SPAG9	NA	NA	NA	intronic	ENSG00000008294	NA	NA	NA	NA	NA	17q21.33	NA	NA	NA	NA	rs12453116	0.23	0.23	0.191	0.211062	0.2932	0.2302	0.3314	0.0552	0.2321	0.29	0.23	0.33	0.06	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.341968	1.341968	NA	NA	NA	NA	0.21	NA	3.7068
1281	19	11409494	11409494	G	A	intronic	TSPAN16	NA	NA	NA	intronic	ENSG00000130167	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs423304	0.39	0.39	NA	0.415535	0.2932	0.2728	0.3444	0.7163	0.3323	0.29	0.26	0.36	0.73	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.501318	NA	NA	NA	NA	ID=COSN165731;OCCURENCE=1(breast)	0.522	NA	3.7068
1281	12	101552075	101552075	G	A	exonic	SLC5A8	NA	synonymous SNV	SLC5A8:NM_145913:exon14:c.C1662T:p.Y554Y	exonic	ENSG00000256870	NA	synonymous SNV	ENSG00000256870:ENST00000536262:exon14:c.C1662T:p.Y554Y	NA	NA	12q23.1	NA	NA	NA	NA	rs2671444	0.73	0.73	0.731	0.752995	0.6352	0.8115	0.6023	0.9032	0.7178	0.63	0.8	0.64	0.88	0.6817	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.235101	NA	NA	0.643289	0.866939	NA	0.616	NA	3.7064776
1281	11	63884027	63884027	C	T	exonic	FLRT1	NA	synonymous SNV	FLRT1:NM_013280:exon2:c.C288T:p.A96A	exonic	ENSG00000126500	NA	synonymous SNV	ENSG00000126500:ENST00000246841:exon2:c.C288T:p.A96A	NA	NA	11q13.1	NA	NA	NA	NA	rs614035	0.45	0.45	0.437	0.40615	0.6968	0.3254	0.5519	0.1475	0.4366	0.7	0.31	0.56	0.15	0.5801	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.058329	NA	NA	0.683384	0.231259	NA	0.449	NA	3.7063826
1281	11	105732731	105732731	C	T	intronic	GRIA4	NA	NA	NA	intronic	ENSG00000152578	NA	NA	NA	NA	NA	11q22.3	NA	NA	NA	NA	rs2277279	0.11	0.11	0.072	0.113618	0.1024	0.1409	0.2435	0.0696	0.0644	0.1	0.12	0.22	0.05	0.1074	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.13779	NA	NA	0.083857	0.075613	NA	0.08	NA	3.706343
1281	1	207109167	207109167	G	A	intronic	PIGR	NA	NA	NA	intronic	ENSG00000162896	NA	NA	NA	NA	NA	1q32.1	NA	Name=CTCF	NA	NA	rs6695632	0.34	0.34	0.322	0.286741	0.4563	0.3284	0.3242	0.1596	0.2147	0.45	0.31	0.37	0.19	0.386	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.346001	NA	NA	0.45147	0.18457	NA	0.442	NA	3.70623
1281	7	76131695	76131695	A	G	exonic	DTX2	NA	synonymous SNV	DTX2:NM_001102596:exon5:c.A1170G:p.L390L,DTX2:NM_001102595:exon7:c.A1311G:p.L437L,DTX2:NM_001102594:exon8:c.A1311G:p.L437L,DTX2:NM_020892:exon9:c.A1311G:p.L437L	exonic	ENSG00000091073	NA	synonymous SNV	ENSG00000091073:ENST00000446820:exon5:c.A1170G:p.L390L,ENSG00000091073:ENST00000413936:exon7:c.A1311G:p.L437L,ENSG00000091073:ENST00000446600:exon7:c.A1038G:p.L346L,ENSG00000091073:ENST00000307569:exon8:c.A1170G:p.L390L,ENSG00000091073:ENST00000430490:exon8:c.A1311G:p.L437L,ENSG00000091073:ENST00000324432:exon9:c.A1311G:p.L437L	NA	NA	7q11.23	NA	NA	NA	NA	rs4728775	0.69	0.69	0.631	0.686102	0.6581	0.8095	0.7219	0.5749	0.7127	0.66	0.79	0.72	0.61	0.6711	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.067714	NA	NA	0.631371	0.574966	NA	0.464	NA	3.7060956
1281	19	33953831	33953831	T	C	intronic	PEPD	NA	NA	NA	intronic	ENSG00000124299	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs75449530	0.15	0.15	0.15	0.118411	0.1431	0.2937	0.0648	0.0174	0.0869	0.15	0.31	0.07	0.03	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.055747	NA	NA	0.150849	0.033237	NA	0.08	NA	3.706051
1281	5	37325940	37325940	T	C	intronic	NUP155	NA	NA	NA	intronic	ENSG00000113569	NA	NA	NA	NA	NA	5p13.2	NA	NA	NA	NA	rs79019688	0.13	0.13	0.122	0.147963	0.1461	0.123	0.1614	0.112	0.2147	0.15	0.08	0.18	0.14	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.341834	NA	NA	0.147892	0.114162	NA	0.08	NA	3.706008
1281	3	58494546	58494546	G	C	intronic	ACOX2	NA	NA	NA	intronic	ENSG00000168306	NA	NA	NA	NA	NA	3p14.3	NA	NA	NA	NA	rs11716125	0.21	0.21	0.22	0.194289	0.2942	0.001	0.2291	0.2655	0.1697	0.3	NA	0.27	0.28	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.592042	NA	NA	NA	NA	NA	0.341	NA	3.7058
1281	7	5398902	5398902	T	C	intronic	TNRC18	NA	NA	NA	intronic	ENSG00000182095	NA	NA	NA	NA	NA	7p22.1	NA	NA	NA	NA	rs12534467	0.29	0.29	0.251	0.269768	0.2942	0.2857	0.2781	0.2526	0.2454	0.31	0.27	0.3	0.25	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.380013	NA	NA	NA	NA	NA	0.232	NA	3.7058
1281	9	135985166	135985166	G	A	intronic	RALGDS	NA	NA	NA	intronic	ENSG00000160271	NA	NA	NA	NA	NA	9q34.2	NA	NA	NA	NA	rs3747817	0.22	0.22	0.176	0.177716	0.2942	0.1577	0.3184	0.0787	0.1125	0.29	0.17	0.33	0.1	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.877518	NA	NA	NA	NA	NA	0.181	NA	3.7058
1281	10	294165	294165	T	C	intronic	ZMYND11	NA	NA	NA	intronic	ENSG00000015171	NA	NA	NA	NA	NA	10p15.3	NA	NA	NA	NA	rs10903752	0.39	0.39	0.359	0.384984	0.2942	0.4722	0.3833	0.3601	0.4233	0.32	0.49	0.37	0.4	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.934092	NA	NA	NA	NA	NA	0.406	NA	3.7058
1281	22	30399000	30399000	A	G	intronic	MTMR3	NA	NA	NA	intronic	ENSG00000100330	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs12165769	0.1	0.1	0.096	0.103634	0.0924	0.0784	0.1081	0.1067	0.1339	0.1	0.08	0.09	0.12	0.1084	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.122754	NA	NA	0.093605	0.101226	NA	0.08	NA	3.705595
1281	19	9408163	9408163	G	A	intronic	ZNF699	NA	NA	NA	intronic	ENSG00000196110	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs56161262	0.16	0.16	0.14	0.181709	0.0865	0.0486	0.1023	0.4425	0.1207	0.08	0.03	0.11	0.45	0.1208	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.294752	NA	NA	0.087128	0.425028	NA	0.261	NA	3.705572
1281	5	170145921	170145921	G	C	intronic	KCNIP1	NA	NA	NA	intronic	ENSG00000182132	NA	NA	NA	NA	NA	5q35.1	NA	NA	NA	NA	rs34377595	0.12	0.12	0.124	0.110823	0.1054	NA	0.0764	0.2859	0.0184	0.11	NA	0.07	0.31	0.0941	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.411665	NA	NA	0.095	0.257603	NA	0.159	NA	3.7055
1281	17	76456135	76456135	G	A	intronic	DNAH17	NA	NA	NA	intronic	ENSG00000187775	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs2289756	0.19	0.19	0.153	0.220048	0.1382	0.246	0.3458	0.1415	0.2945	0.13	0.23	0.3	0.13	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.63543	NA	NA	0.156345	0.141296	NA	0.13	NA	3.705455
1281	5	170145749	170145749	C	T	intronic	KCNIP1	NA	NA	NA	intronic	ENSG00000182132	NA	NA	NA	NA	NA	5q35.1	NA	NA	NA	NA	rs10039251	0.12	0.12	0.115	0.110823	0.1054	NA	0.0764	0.2859	0.0184	0.11	NA	0.07	0.31	0.0945	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.659119	2.659119	NA	0.094884	0.256695	NA	0.159	NA	3.705216
1281	12	52695630	52695630	C	T	upstream	KRT86	NA	NA	NA	intronic	ENSG00000170442	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs1894033	0.12	0.12	0.12	0.154353	0.1282	0.0883	0.1311	0.171	0.2434	0.11	0.08	0.13	0.17	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.080187	NA	NA	NA	NA	NA	0.181	NA	3.7051333
1282	2	43054277	43054277	C	T	intergenic	HAAO,ZFP36L2	dist=34526;dist=395264	NA	NA	ncRNA_intronic	ENSG00000232202	NA	NA	NA	NA	NA	2p21	NA	NA	NA	NA	rs62143243	0.3	0.3	0.251	0.32508	0.2952	0.0327	0.5144	0.5061	0.2781	0.27	0.03	0.49	0.5	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.794107	NA	NA	NA	NA	NA	0.283	NA	3.7048
1282	5	112899250	112899250	G	A	intronic	YTHDC2	NA	NA	NA	intronic	ENSG00000047188	NA	NA	NA	NA	NA	5q22.2	NA	NA	NA	NA	rs6886199	0.42	0.42	0.414	0.420128	0.2952	0.2302	0.4625	0.7791	0.229	0.3	0.25	0.4	0.81	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.597855	NA	NA	NA	NA	NA	0.529	NA	3.7048
1282	5	118945923	118945923	A	G	intergenic	HSD17B4,FAM170A	dist=67893;dist=19331	NA	NA	ncRNA_exonic	ENSG00000239067	NA	NA	NA	NA	NA	5q23.1	NA	NA	NA	NA	rs35579755	0.25	0.25	0.246	0.270168	0.2952	0.1042	0.281	0.3192	0.3415	0.28	0.11	0.29	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.314075	NA	NA	NA	NA	NA	0.203	NA	3.7048
1282	7	56082992	56082992	C	G	intronic	PSPH	NA	NA	NA	intronic	ENSG00000146733	NA	NA	NA	NA	NA	7p11.2	NA	NA	NA	NA	rs4255091	0.33	0.33	0.337	0.290535	0.2952	0.4276	0.2637	0.2534	0.2137	0.31	0.41	0.28	0.28	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.199483	NA	NA	NA	NA	NA	0.391	NA	3.7048
1282	9	119204638	119204638	G	A	intronic	ASTN2	NA	NA	NA	intronic	ENSG00000148219	NA	NA	NA	NA	NA	9q33.1	NA	NA	NA	NA	rs2302827	0.38	0.38	0.35	0.378195	0.2952	0.505	0.4942	0.2625	0.407	0.29	0.5	0.49	0.28	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.209116	NA	NA	NA	NA	NA	0.275	NA	3.7048
1282	10	72509809	72509809	C	T	intronic	ADAMTS14	NA	NA	NA	intronic	ENSG00000138316	NA	NA	NA	NA	NA	10q22.1	NA	NA	NA	NA	rs2541229	0.31	0.31	0.29	0.30631	0.2952	0.2857	0.415	0.2791	0.2986	0.3	0.31	0.4	0.25	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.2991	NA	NA	NA	NA	NA	0.275	NA	3.7048
1282	22	22712742	22712742	A	G	intergenic	LOC96610,ZNF280B	dist=35418;dist=126030	NA	NA	downstream	ENSG00000211648	NA	NA	NA	NA	NA	22q11.22	NA	Name=GR	NA	NA	rs3753078	0.73	0.73	0.677	0.70607	0.7952	0.7996	0.8199	0.444	0.7914	0.79	0.81	0.82	0.46	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.555703	NA	NA	NA	NA	NA	0.587	NA	3.7048
1282	10	128810685	128810685	T	C	intronic	DOCK1	NA	NA	NA	ncRNA_intronic	ENSG00000223528	NA	NA	NA	NA	NA	10q26.2	NA	NA	NA	NA	rs1890872	0.17	0.17	0.159	0.152756	0.2187	0.1875	0.1196	0.0938	0.1524	0.22	0.2	0.13	0.1	0.1912	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.605813	NA	NA	0.218779	0.100094	NA	0.072	NA	3.7046543
1282	20	46294725	46294725	C	T	intronic	SULF2	NA	NA	NA	intronic	ENSG00000196562	NA	NA	NA	NA	NA	20q13.12	NA	Name=Pol2-4H8	NA	NA	rs2076545	0.43	0.43	0.433	0.407348	0.4165	0.5546	0.4899	0.2496	0.4008	0.42	0.58	0.48	0.26	0.4354	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.913156	NA	NA	0.44407	0.28847	NA	0.442	NA	3.70403
1282	6	31116133	31116133	A	C	intronic	CCHCR1	NA	NA	NA	intronic	ENSG00000204536	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs17197031	0.09	0.09	0.069	0.077476	0.1123	0.0347	0.1369	0.0567	0.0716	0.12	0.04	0.15	0.05	0.0981	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.908645	NA	NA	0.08564	0.05169	NA	0.051	NA	3.70396
1282	12	131490483	131490483	G	A	intronic	GPR133	NA	NA	NA	intronic	ENSG00000111452	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs35387826	0.07	0.07	0.052	0.0595048	0.1004	0.0536	0.1066	0.0045	0.0644	0.1	0.04	0.12	0.0041	0.0845	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.673768	NA	NA	0.111163	0.020209	NA	0.029	NA	3.703937
1282	14	51371130	51371130	C	T	UTR3	ABHD12B	NM_181814:c.*46C>T,NM_001206673:c.*46C>T	NA	NA	UTR3	ENSG00000131969	ENST00000395752:c.*46C>T,ENST00000557345:c.*648C>T,ENST00000337334:c.*46C>T,ENST00000382029:c.*824C>T,ENST00000353130:c.*46C>T	NA	NA	NA	NA	14q22.1	NA	NA	NA	NA	rs11157780	0.27	0.27	0.239	0.250799	0.2028	0.4573	0.3746	0.0469	0.2751	0.21	0.47	0.37	0.07	0.2358	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.637993	1.637993	NA	0.19093	0.070586	NA	0.167	NA	3.7038034
1282	2	43054369	43054369	T	C	intergenic	HAAO,ZFP36L2	dist=34618;dist=395172	NA	NA	ncRNA_exonic	ENSG00000232202	NA	NA	NA	NA	NA	2p21	NA	NA	NA	NA	rs62143244	0.31	0.31	0.289	0.329073	0.2962	0.0327	0.5144	0.5204	0.2781	0.27	0.03	0.51	0.53	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.197438	NA	NA	NA	NA	NA	0.283	NA	3.7038
1282	3	134880745	134880745	G	T	intronic	EPHB1	NA	NA	NA	intronic	ENSG00000154928	NA	NA	NA	NA	NA	3q22.2	NA	NA	NA	NA	rs2270882	0.38	0.38	0.353	0.360024	0.2962	0.5714	0.4035	0.2526	0.3221	0.3	0.62	0.36	0.23	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.879982	NA	NA	NA	NA	NA	0.333	NA	3.7038
1282	7	23810523	23810523	C	G	intronic	STK31	NA	NA	NA	intronic	ENSG00000196335	NA	NA	NA	NA	NA	7p15.3	NA	NA	NA	NA	rs41273996	0.25	0.25	0.236	0.264177	0.2962	0.3948	0.1643	0.152	0.319	0.28	0.36	0.17	0.14	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.160905	NA	NA	NA	NA	NA	0.159	NA	3.7038
1282	9	6990364	6990364	G	T	intronic	KDM4C	NA	NA	NA	intronic	ENSG00000107077	NA	NA	NA	NA	NA	9p24.1	NA	NA	NA	NA	rs2760657	0.24	0.24	0.182	0.198682	0.2962	0.1756	0.2752	0.146	0.1391	0.3	0.19	0.29	0.14	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.09758	NA	NA	NA	NA	NA	0.101	NA	3.7038
1282	9	91978539	91978539	A	T	intronic	SEMA4D	NA	NA	NA	intronic	ENSG00000187764	NA	NA	NA	NA	NA	9q22.2	NA	NA	NA	NA	rs13297725	0.35	0.35	0.317	0.383786	0.2962	0.4067	0.4712	0.3487	0.4356	0.32	0.37	0.43	0.31	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.328403	NA	NA	NA	NA	NA	0.268	NA	3.7038
1282	12	7015915	7015915	A	G	intronic	LRRC23	NA	NA	NA	intronic	ENSG00000010626	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs1007924	0.37	0.37	0.389	0.389976	0.2962	0.256	0.2781	0.677	0.316	0.3	0.25	0.35	0.64	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.050185	NA	NA	NA	NA	NA	0.413	NA	3.7038
1282	12	7894188	7894188	C	G	intronic	CLEC4C	NA	NA	NA	intronic	ENSG00000198178	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs73056607	0.23	0.23	0.201	0.186901	0.2962	0.1994	0.3285	0.0446	0.1534	0.29	0.23	0.34	0.05	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.000738	NA	NA	NA	NA	ID=COSN164126;OCCURENCE=1(breast)	0.312	NA	3.7038
1282	12	125466987	125466987	C	T	intronic	DHX37	NA	NA	NA	intronic	ENSG00000150990	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs11057949	0.32	0.32	0.302	0.352436	0.2962	0.4335	0.4222	0.1899	0.4969	0.27	0.44	0.43	0.2	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.023057	NA	NA	NA	NA	NA	0.384	NA	3.7038
1282	14	75359441	75359441	T	C	intronic	DLST	NA	NA	NA	intronic	ENSG00000119689	NA	NA	NA	NA	NA	14q24.3	NA	NA	NA	NA	rs2300599	0.29	0.29	0.288	0.284545	0.2962	0.2192	0.2349	0.3434	0.2955	0.3	0.25	0.27	0.34	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.01665	NA	NA	NA	NA	NA	0.188	NA	3.7038
1282	15	90333616	90333616	T	C	intronic	ANPEP	NA	NA	NA	intronic	ENSG00000166825	NA	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs8192299	0.28	0.28	0.27	0.311701	0.2962	0.2341	0.245	0.3759	0.3681	0.29	0.25	0.24	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.718333	NA	NA	NA	NA	NA	0.341	NA	3.7038
1282	16	30000901	30000901	G	A	intronic	TAOK2	NA	NA	NA	intronic	ENSG00000149930	NA	NA	NA	Score=737;Name=lod=1315	NA	16p11.2	NA	NA	NA	NA	rs3814881	0.34	0.34	0.32	0.350439	0.4423	0.376	0.3156	0.1611	0.5102	0.44	0.36	0.34	0.16	0.4089	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.838604	2.838604	NA	0.445	0.179335	NA	0.362	NA	3.7038
1282	19	10108929	10108929	C	T	intronic	COL5A3	NA	NA	NA	intronic	ENSG00000080573	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs3745596	0.24	0.24	NA	0.202276	0.2962	0.1677	0.2176	0.1982	0.136	0.33	0.19	0.24	0.16	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.044804	NA	NA	NA	NA	NA	0.123	NA	3.7038
1282	19	57835279	57835279	G	A	intronic	ZNF543	NA	NA	NA	intronic	ENSG00000178229	NA	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs4801467	0.34	0.34	0.299	0.319688	0.2962	0.4038	0.4366	0.2368	0.2863	0.3	0.44	0.41	0.22	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.645163	NA	NA	NA	NA	NA	0.225	NA	3.7038
1282	21	46697820	46697820	G	T	intronic	POFUT2	NA	NA	NA	intronic	ENSG00000186866	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs914214	0.32	0.32	0.328	0.340056	0.2962	0.4444	0.2233	0.298	0.4172	0.3	0.44	0.25	0.26	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.125265	NA	NA	NA	NA	NA	0.261	NA	3.7038
1282	14	51372103	51372103	C	G	UTR3	PYGL	NM_002863:c.*7G>C,NM_001163940:c.*7G>C	NA	NA	UTR3	ENSG00000100504	ENST00000544180:c.*7G>C,ENST00000216392:c.*7G>C	NA	NA	NA	NA	14q22.1	NA	NA	NA	NA	rs1042266	0.27	0.27	NA	0.250998	0.2028	0.4573	0.3761	0.0469	0.2751	0.21	0.47	0.37	0.07	0.2357	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.46688	NA	NA	0.191047	0.070132	NA	0.167	NA	3.7037864
1282	2	220156146	220156146	G	A	intronic	PTPRN	NA	NA	NA	intronic	ENSG00000054356	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs1983297	0.07	0.07	0.058	0.0748802	0.1004	0.0437	0.0793	0.0431	0.1207	0.09	0.04	0.1	0.04	0.0893	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.031932	NA	NA	0.106744	0.044939	NA	0.138	NA	3.703556
1282	6	26093303	26093303	T	C	intronic	HFE	NA	NA	NA	intronic	ENSG00000010704	NA	NA	NA	NA	NA	6p22.2	NA	NA	NA	NA	rs1800708	0.24	0.24	0.203	0.21865	0.0865	0.5506	0.2133	0.0764	0.2086	0.1	0.62	0.15	0.09	0.1472	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.338054	NA	NA	0.062791	0.08965	NA	0.116	NA	3.703509
1282	9	36657220	36657220	C	G	intronic	MELK	NA	NA	NA	intronic	ENSG00000165304	NA	NA	NA	NA	NA	9p13.2	NA	NA	NA	NA	rs72733443	0.05	0.05	0.049	0.0433307	0.1034	0.0099	0.0533	0.003	0.0634	0.12	0.01	0.06	0.01	0.0843	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.374709	NA	NA	0.108953	0.024285	NA	0.058	NA	3.703347
1282	19	4947041	4947041	A	G	intronic	UHRF1	NA	NA	NA	ncRNA_intronic	ENSG00000034063	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs2602734	0.68	0.68	0.683	0.695288	0.6302	0.8036	0.6037	0.6952	0.7157	0.62	0.8	0.62	0.68	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.274086	NA	NA	NA	NA	NA	0.63	NA	3.7031333
1282	20	3674064	3674064	G	C	intronic	SIGLEC1	NA	NA	NA	intronic	ENSG00000088827	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs3827110	0.13	0.13	0.154	0.125998	0.0915	0.0933	0.0461	0.2791	0.045	0.1	0.1	0.04	0.28	0.107	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.360676	NA	NA	0.09858	0.236029	NA	0.116	NA	3.70292
1282	4	10027744	10027744	G	A	intronic	SLC2A9	NA	NA	NA	intronic	ENSG00000109667	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs6449238	0.28	0.28	0.283	0.270567	0.2972	0.0972	0.2205	0.5582	0.0685	0.28	0.09	0.23	0.55	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.331287	NA	NA	NA	NA	NA	0.319	NA	3.7028
1282	5	142311509	142311509	T	C	intronic	ARHGAP26	NA	NA	NA	intronic	ENSG00000145819	NA	NA	NA	NA	NA	5q31.3	NA	NA	NA	NA	rs712177	0.6	0.6	0.609	0.659345	0.2972	0.8988	0.4496	0.8313	0.7014	0.31	0.9	0.4	0.83	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.482992	NA	NA	NA	NA	NA	0.529	NA	3.7028
1282	8	139153385	139153385	C	A	intronic	FAM135B	NA	NA	NA	intronic	ENSG00000147724	NA	NA	NA	NA	NA	8q24.23	NA	NA	NA	NA	rs7816196	0.26	0.26	0.261	0.267772	0.2972	0.2242	0.2695	0.2534	0.3006	0.28	0.23	0.3	0.26	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.072301	NA	NA	NA	NA	NA	0.362	NA	3.7028
1282	9	139108359	139108359	G	A	intronic	QSOX2	NA	NA	NA	intronic	ENSG00000165661	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs55791344	0.18	0.18	0.152	0.162141	0.2972	0.1161	0.219	0.0318	0.2065	0.3	0.12	0.22	0.03	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.724355	NA	NA	NA	NA	NA	0.138	NA	3.7028
1282	10	64426056	64426056	G	T	intronic	ZNF365	NA	NA	NA	intronic	ENSG00000138311	NA	NA	NA	NA	NA	10q21.2	NA	NA	NA	NA	rs4746516	0.35	0.35	0.343	0.398962	0.2972	0.2421	0.4726	0.5098	0.4632	0.29	0.27	0.38	0.5	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.372316	NA	NA	NA	NA	NA	0.239	NA	3.7028
1282	11	8246326	8246326	G	A	intronic	LMO1	NA	NA	NA	intronic	ENSG00000166407	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs34544683	0.17	0.17	0.157	0.159545	0.2972	0.0218	0.2205	0.0976	0.2004	0.29	0.01	0.26	0.1	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.291673	NA	NA	NA	NA	NA	0.225	NA	3.7028
1282	11	113076982	113076982	G	C	intronic	NCAM1	NA	NA	NA	intronic	ENSG00000149294	NA	NA	NA	NA	NA	11q23.2	NA	NA	NA	NA	rs1975259	0.39	0.39	0.373	0.404153	0.2972	0.4167	0.2839	0.5363	0.408	0.3	0.42	0.27	0.56	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.307587	NA	NA	NA	NA	NA	0.42	NA	3.7028
1282	14	24647522	24647522	G	T	intronic	REC8	NA	NA	NA	intronic	ENSG00000100918	NA	NA	NA	NA	NA	14q12	NA	NA	NA	NA	rs3736840	0.23	0.23	0.221	0.232628	0.2972	0.1667	0.1888	0.1914	0.3211	0.29	0.17	0.22	0.2	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.037206	NA	NA	NA	NA	NA	0.188	NA	3.7028
1282	16	71724369	71724369	T	C	intronic	PHLPP2	NA	NA	NA	intronic	ENSG00000040199	NA	NA	NA	NA	NA	16q22.2	NA	NA	NA	NA	rs12448022	0.21	0.21	0.187	0.1873	0.2972	0.0417	0.1744	0.2345	0.1697	0.31	0.05	0.21	0.22	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.978377	3.978377	NA	NA	NA	NA	0.232	NA	3.7028
1282	17	48541491	48541491	A	G	intronic	ACSF2	NA	NA	NA	intronic	ENSG00000167107	NA	NA	NA	NA	NA	17q21.33	NA	NA	NA	NA	rs2277629	0.22	0.22	0.192	0.186701	0.2972	0.1379	0.245	0.0961	0.2045	0.28	0.14	0.3	0.15	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.014734	NA	NA	NA	NA	NA	0.116	NA	3.7028
1282	19	43876931	43876931	G	A	intergenic	CD177,TEX101	dist=9451;dist=15832	NA	NA	ncRNA_exonic	ENSG00000204933	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs66774479	0.32	0.32	0.301	0.3127	0.2972	0.5575	0.3646	0.0613	0.3793	0.31	0.54	0.32	0.08	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.184409	NA	1	NA	NA	NA	0.348	NA	3.7028
1282	20	13845726	13845726	T	C	intronic	SEL1L2	NA	NA	NA	intronic	ENSG00000101251	NA	NA	NA	NA	NA	20p12.1	NA	NA	NA	NA	rs2073292	0.25	0.25	0.222	0.265176	0.2972	0.2034	0.3213	0.1589	0.3998	0.3	0.2	0.32	0.17	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.312683	NA	NA	NA	NA	NA	0.283	NA	3.7028
1282	22	31819212	31819212	A	G	intronic	DRG1	NA	NA	NA	intronic	ENSG00000185721	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs5753609	0.35	0.35	0.326	0.307508	0.2972	0.5526	0.3905	0.149	0.2209	0.31	0.56	0.36	0.17	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.383531	NA	NA	NA	NA	NA	0.326	NA	3.7028
1282	11	63283220	63283220	C	G	ncRNA_intronic	MIR3680-1,MIR3680-2	NA	NA	NA	intronic	ENSG00000133317	NA	NA	NA	NA	NA	11q12.3	NA	NA	NA	NA	rs3740633	0.28	0.28	0.279	0.322684	0.2147	0.2748	0.1556	0.5348	0.3149	0.21	0.25	0.17	0.51	0.2275	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.82829	NA	NA	0.18846	0.473876	NA	0.319	NA	3.7026733
1282	5	33457535	33457535	T	A	intronic	TARS	NA	NA	NA	intronic	ENSG00000113407	NA	NA	NA	NA	NA	5p13.3	NA	NA	Name=37	NA	rs2270903	0.56	0.56	0.574	0.606829	0.3986	0.7312	0.4914	0.702	0.6462	0.4	0.73	0.45	0.69	0.5052	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.626691	2.626691	NA	0.393721	0.669088	NA	0.645	NA	3.702479
1282	1	41541166	41541166	C	T	intronic	SCMH1	NA	NA	NA	intronic	ENSG00000010803	NA	NA	NA	NA	NA	1p34.2	NA	NA	NA	NA	rs41269465	0.09	0.09	0.068	0.091254	0.1034	0.1181	0.1542	0.0038	0.1247	0.1	0.12	0.13	0.01	0.1032	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.833856	NA	NA	0.091047	0.021798	NA	0.043	NA	3.702353
1282	11	17448704	17448704	G	A	intronic	ABCC8	NA	NA	NA	intronic	ENSG00000006071	NA	NA	NA	Score=374;Name=lod=44	NA	11p15.1	NA	NA	NA	NA	rs1799854	0.42	0.42	0.354	0.368411	0.4205	0.5506	0.536	0.1384	0.319	0.42	0.57	0.51	0.16	0.4346	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.493998	2.493998	NA	0.44293	0.179318	NA	0.442	NA	3.70197
1282	3	52857778	52857778	T	A	intronic	ITIH4	NA	NA	NA	intronic	ENSG00000055955,ENSG00000243696	NA	NA	NA	NA	NA	3p21.1	NA	NA	NA	NA	rs34860124	0.07	0.07	0.052	0.0555112	0.1004	0.0417	0.111	0.0076	0.0491	0.11	0.04	0.14	0.01	0.0854	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.215239	NA	NA	0.112326	0.022242	ID=COSN166897;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.13	NA	3.701874
1282	2	161169828	161169828	C	G	intronic	RBMS1	NA	NA	NA	intronic	ENSG00000153250	NA	NA	NA	NA	NA	2q24.2	NA	NA	NA	NA	rs10929977	0.31	0.31	0.3	0.261781	0.2982	0.5317	0.2118	0.1241	0.1677	0.31	0.52	0.24	0.14	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.781029	NA	NA	NA	NA	NA	0.196	NA	3.7018
1282	6	46988648	46988648	C	T	intronic	GPR110	NA	NA	NA	intronic	ENSG00000153292	NA	NA	NA	NA	NA	6p12.3	NA	NA	NA	NA	rs1226493	0.44	0.44	0.473	0.492812	0.2982	0.4256	0.389	0.7716	0.4591	0.27	0.42	0.36	0.77	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.063802	NA	NA	NA	NA	NA	0.493	NA	3.7018
1282	6	89864679	89864679	A	G	intronic	PM20D2	NA	NA	NA	intronic	ENSG00000146281	NA	NA	NA	NA	NA	6q15	NA	NA	NA	NA	rs4053639	0.36	0.36	0.354	0.368011	0.2982	0.256	0.3862	0.5688	0.271	0.29	0.29	0.38	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.310926	NA	NA	NA	NA	NA	0.362	NA	3.7018
1282	10	100156990	100156990	T	A	intronic	PYROXD2	NA	NA	NA	intronic	ENSG00000119943	NA	NA	NA	NA	NA	10q24.2	NA	NA	NA	NA	rs10883087	0.38	0.38	0.366	0.391973	0.2982	0.4415	0.3559	0.4017	0.4499	0.31	0.46	0.34	0.43	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.389228	NA	NA	NA	NA	NA	0.275	NA	3.7018
1282	19	12014274	12014274	A	G	intronic	ZNF69	NA	NA	NA	intronic	ENSG00000198429	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs279205	0.31	0.31	0.338	0.305511	0.2982	0.0109	0.2695	0.6785	0.138	0.3	0.02	0.28	0.68	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.779662	NA	NA	NA	NA	NA	0.341	NA	3.7018
1282	22	23631639	23631639	T	C	intronic	BCR	NA	NA	NA	intronic	ENSG00000186716	NA	NA	NA	NA	NA	22q11.23	NA	NA	NA	NA	rs11090228	0.31	0.31	0.31	0.322684	0.2982	0.0754	0.3242	0.5461	0.2996	0.3	0.08	0.31	0.57	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.018709	NA	NA	NA	NA	NA	0.304	NA	3.7018
1282	22	37528606	37528606	G	A	intronic	IL2RB	NA	NA	NA	intronic	ENSG00000100385	NA	NA	NA	NA	NA	22q12.3	NA	NA	NA	NA	rs2072862	0.34	0.34	0.369	0.35623	0.2982	0.5565	0.2176	0.2549	0.4448	0.28	0.57	0.22	0.27	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.169094	NA	NA	NA	NA	NA	0.406	NA	3.7018
1282	10	26310679	26310679	A	C	intronic	MYO3A	NA	NA	NA	UTR3	ENSG00000095777	ENST00000376302:c.*89A>C	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs17666079	0.33	0.33	0.326	0.330072	0.4652	0.2917	0.2968	0.1785	0.4591	0.47	0.28	0.29	0.21	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.998819	NA	NA	NA	NA	NA	0.283	NA	3.7014667
1282	2	15615910	15615910	A	G	exonic	NBAS	NA	synonymous SNV	NBAS:NM_015909:exon14:c.T1242C:p.S414S	exonic	ENSG00000151779	NA	synonymous SNV	ENSG00000151779:ENST00000281513:exon14:c.T1242C:p.S414S,ENSG00000151779:ENST00000441750:exon14:c.T1242C:p.S414S	NA	NA	2p24.3	NA	NA	NA	NA	rs1990754	0.49	0.49	0.505	0.492812	0.6909	0.1696	0.6009	0.5174	0.5123	0.67	0.19	0.59	0.47	0.5909	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.163807	NA	NA	0.683605	0.544031	ID=COSM148803;OCCURENCE=1(breast),1(stomach)	0.645	NA	3.7012616
1282	3	10076975	10076975	A	C	intronic	FANCD2	NA	NA	NA	intronic	ENSG00000144554	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs17032276	0.18	0.18	0.188	0.18111	0.1392	0.0476	0.1614	0.3616	0.1319	0.15	0.07	0.18	0.38	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.984913	NA	NA	0.159648	0.325145	NA	0.348	NA	3.701152
1282	12	11035368	11035368	T	G	ncRNA_intronic	PRH1-PRR4	NA	NA	NA	intronic	ENSG00000231887	NA	NA	NA	NA	NA	12p13.2	NA	NA	NA	NA	rs11054060	0.55	0.55	0.516	0.534545	0.6322	0.7312	0.6138	0.1732	0.6636	0.62	0.72	0.61	0.19	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.020127	NA	NA	NA	NA	NA	0.457	NA	3.7011333
1282	7	33014404	33014404	G	A	intronic	FKBP9	NA	NA	NA	intronic	ENSG00000105778,ENSG00000122642	NA	NA	NA	NA	NA	7p14.3	NA	NA	NA	NA	rs2953557	0.11	0.11	0.029	0.0990415	0.163	0.0486	0.2709	0.0197	0.0706	0.17	0.05	0.22	0.03	0.1359	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.33669	NA	NA	NA	NA	NA	0.188	NA	3.7011
1282	11	105768983	105768983	T	C	intronic	GRIA4	NA	NA	NA	intronic	ENSG00000152578	NA	NA	NA	NA	NA	11q22.3	NA	NA	NA	NA	rs609239	0.11	0.11	0.087	0.111621	0.1074	0.1458	0.245	0.0567	0.0603	0.11	0.11	0.22	0.04	0.1053	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.086828	NA	NA	0.086287	0.077028	NA	0.101	NA	3.701013
1282	1	111778468	111778468	G	A	intronic	CHI3L2	NA	NA	NA	intronic	ENSG00000064886	NA	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	rs961364	0.26	0.26	0.245	0.237021	0.2992	0.3204	0.2925	0.0825	0.2566	0.3	0.34	0.27	0.09	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.272225	NA	NA	NA	NA	NA	0.254	NA	3.7008
1282	1	156247907	156247907	C	T	intronic	SMG5	NA	NA	NA	intronic	ENSG00000198952	NA	NA	NA	NA	NA	1q22	NA	NA	NA	NA	rs2248273	0.25	0.25	0.231	0.234425	0.2992	0.2599	0.1758	0.1929	0.2393	0.3	0.28	0.2	0.18	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.66678	NA	NA	NA	NA	ID=COSN163267;OCCURENCE=1(NS)	0.159	NA	3.7008
1282	2	241725637	241725637	G	A	intronic	KIF1A	NA	NA	NA	intronic	ENSG00000130294	NA	NA	NA	NA	NA	2q37.3	NA	NA	NA	NA	rs74002922	0.23	0.23	0.215	0.214257	0.2992	0.1458	0.1643	0.2405	0.1973	0.3	0.12	0.17	0.27	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.637467	NA	NA	NA	NA	NA	0.225	NA	3.7008
1282	4	17511127	17511127	T	C	intronic	QDPR	NA	NA	NA	intronic	ENSG00000151552	NA	NA	NA	NA	NA	4p15.32	NA	NA	NA	NA	rs3733574	0.28	0.28	0.275	0.270168	0.2992	0.3353	0.196	0.2602	0.2393	0.31	0.35	0.2	0.23	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.021762	NA	NA	NA	NA	NA	0.203	NA	3.7008
1282	7	6975973	6975973	T	C	intergenic	CCZ1B,LOC100131257	dist=110047;dist=139428	NA	NA	ncRNA_exonic	ENSG00000242731	NA	NA	NA	NA	NA	7p22.1	NA	NA	NA	NA	rs67112259	0.44	0.44	0.413	0.453075	0.2992	0.8641	0.3098	0.2867	0.5143	0.3	0.86	0.28	0.28	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.121275	NA	NA	NA	NA	NA	0.348	NA	3.7008
1282	7	34989337	34989337	T	G	intronic	DPY19L1	NA	NA	NA	intronic	ENSG00000173852	NA	NA	NA	NA	NA	7p14.3	NA	NA	NA	NA	rs2021390	0.23	0.23	0.232	0.21885	0.2992	0.129	0.2608	0.1974	0.228	0.3	0.13	0.26	0.23	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.637928	NA	NA	NA	NA	NA	0.312	NA	3.7008
1282	10	96013824	96013824	C	T	intronic	PLCE1	NA	NA	NA	intronic	ENSG00000138193	NA	NA	NA	NA	NA	10q23.33	NA	NA	NA	NA	rs1408820	0.27	0.27	0.267	0.276757	0.2992	0.2996	0.232	0.2322	0.3221	0.29	0.3	0.25	0.21	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.384831	NA	NA	NA	NA	NA	0.217	NA	3.7008
1282	15	76077257	76077257	G	A	intergenic	MIR4313,UBE2Q2	dist=22601;dist=58365	NA	NA	ncRNA_intronic	ENSG00000187812	NA	NA	NA	NA	NA	15q24.2	NA	NA	NA	NA	rs3751536	0.25	0.25	0.202	0.24381	0.2992	0.2272	0.3602	0.1445	0.2556	0.31	0.2	0.33	0.14	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.070963	NA	NA	NA	NA	NA	0.138	NA	3.7008
1282	19	53157096	53157096	C	A	intronic	ZNF83	NA	NA	NA	intronic	ENSG00000167766	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs4287691	0.23	0.23	0.234	0.205072	0.2992	0.0496	0.1945	0.2973	0.1513	0.29	0.06	0.25	0.3	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.476733	NA	NA	NA	NA	NA	0.225	NA	3.7008
1282	19	58099706	58099706	C	T	intronic	ZIK1	NA	NA	NA	intronic	ENSG00000171649	NA	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs73060458	0.3	0.3	0.304	0.324081	0.2992	0.3155	0.2478	0.4009	0.3088	0.3	0.25	0.27	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.646248	NA	NA	NA	NA	NA	0.326	NA	3.7008
1282	20	40120211	40120211	C	T	intronic	CHD6	NA	NA	NA	intronic	ENSG00000124177	NA	NA	NA	NA	NA	20q12	NA	NA	NA	NA	rs4810321	0.53	0.53	0.527	0.542732	0.2992	0.7063	0.4438	0.7927	0.3569	0.29	0.7	0.42	0.8	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.472559	NA	NA	NA	NA	NA	0.536	NA	3.7008
1282	22	22434448	22434448	A	G	intergenic	TOP3B,VPREB1	dist=97301;dist=164752	NA	NA	ncRNA_exonic	ENSG00000253752	NA	NA	NA	NA	NA	22q11.22	NA	NA	NA	NA	rs5750483	0.5	0.5	0.483	0.552915	0.2992	0.7302	0.5389	0.5492	0.6462	0.29	0.73	0.48	0.57	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.723848	NA	NA	NA	NA	NA	0.399	NA	3.7008
1282	2	233759650	233759650	T	A	intronic	NGEF	NA	NA	NA	intronic	ENSG00000066248	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs75269119	0.08	0.08	0.052	0.117013	0.0785	0.119	0.1037	0.0439	0.2628	0.08	0.1	0.09	0.03	0.1181	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.278435	NA	NA	0.102606	0.055833	NA	0.101	NA	3.700794
1282	7	38256938	38256938	C	T	intronic	STARD3NL	NA	NA	NA	intronic	ENSG00000010270	NA	NA	NA	NA	NA	7p14.1	NA	NA	NA	NA	rs6959603	0.06	0.06	0.063	0.0479233	0.1163	0.0228	0.0504	0.0098	0.0532	0.12	0.03	0.05	0.01	0.0811	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.166962	NA	NA	0.102442	0.028824	NA	0.029	NA	3.700158
1282	2	219222733	219222733	G	A	intronic	C2orf62	NA	NA	NA	intronic	ENSG00000158428	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs62182089	0.07	0.07	0.075	0.076877	0.1024	0.0347	0.0591	0.1067	0.0665	0.09	0.03	0.06	0.09	0.0906	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.804718	NA	NA	0.106977	0.113936	NA	0.051	NA	3.700023
1282	1	149094851	149094851	T	C	intergenic	LOC645166,LOC388692	dist=141797;dist=184625	NA	NA	ncRNA_intronic	ENSG00000179571	NA	NA	NA	NA	NA	1q21.2	NA	NA	NA	NA	rs9438369	0.24	0.24	0.228	0.233427	0.3002	0.245	0.2464	0.1838	0.2106	0.29	0.24	0.23	0.19	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.550743	NA	NA	NA	NA	NA	0.203	NA	3.6998
1282	22	22434566	22434566	C	T	intergenic	TOP3B,VPREB1	dist=97419;dist=164634	NA	NA	ncRNA_exonic	ENSG00000253752	NA	NA	NA	NA	NA	22q11.22	NA	NA	NA	NA	rs5750484	0.52	0.52	0.509	0.583067	0.3002	0.7302	0.5432	0.6611	0.6452	0.29	0.73	0.48	0.67	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.14588	NA	NA	NA	NA	NA	0.449	NA	3.6998
1282	9	14747133	14747133	T	C	intronic	FREM1	NA	NA	NA	intronic	ENSG00000164946	NA	NA	NA	NA	NA	9p22.3	NA	NA	NA	NA	rs2270529	0.31	0.31	0.303	0.337859	0.3002	0.2768	0.3415	0.3638	0.4018	0.31	0.26	0.32	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.38063	1.38063	NA	NA	NA	NA	0.348	NA	3.6998
1282	9	34224631	34224631	C	T	intronic	UBAP1	NA	NA	NA	intronic	ENSG00000165006	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs7856567	0.42	0.42	0.404	0.433706	0.3002	0.7411	0.3948	0.2481	0.5327	0.32	0.7	0.38	0.26	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.35903	NA	NA	NA	NA	NA	0.283	NA	3.6998
1282	10	96030458	96030458	G	T	intronic	PLCE1	NA	NA	NA	intronic	ENSG00000138193	NA	NA	NA	NA	NA	10q23.33	NA	NA	NA	NA	rs1969867	0.27	0.27	0.242	0.277955	0.3002	0.3006	0.2349	0.2315	0.3252	0.29	0.3	0.25	0.22	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.135413	NA	NA	NA	NA	NA	0.225	NA	3.6998
1282	16	28513129	28513129	T	C	intronic	IL27	NA	NA	NA	intronic	ENSG00000197272	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs181205	NA	NA	0.23	0.229433	0.3002	0.0952	0.3934	0.233	0.1738	NA	NA	NA	NA	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.806361	NA	NA	NA	NA	NA	0.167	NA	3.6998
1282	19	36221051	36221051	G	A	intronic	MLL4	NA	NA	NA	ncRNA_intronic	ENSG00000105663	NA	NA	NA	NA	NA	19q13.12	NA	NA	NA	NA	rs2242520	0.33	0.33	0.303	0.371406	0.2078	0.5476	0.2853	0.4024	0.3773	0.2	0.5	0.27	0.36	0.2623	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.265051	NA	NA	0.163526	0.371015	NA	0.268	NA	3.6997073
1282	15	86253911	86253911	T	G	intronic	AKAP13	NA	NA	NA	intronic	ENSG00000170776	NA	NA	NA	NA	NA	15q25.3	NA	Name=Oct-2,p300,BATF,POU2F2,USF2,PU.1,SP1,MEF2C_(SC-13268),BCL11A,MEF2A,IRF4_(M-17),NFKB,PAX5-N19,SRF,USF-1,TBP,JunD,EBF	Name=10	NA	rs8038249	0.67	0.67	0.622	0.665735	0.7753	0.623	0.8141	0.5356	0.6677	0.79	0.57	0.78	0.51	0.7449	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.752425	1.752425	NA	0.78013	0.559491	NA	0.681	NA	3.69967
1282	6	29580436	29580436	A	G	intronic	GABBR1	NA	NA	NA	intronic	ENSG00000204681	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs29253	0.09	0.09	0.076	0.109026	0.0974	0.123	0.0807	0.0946	0.1462	0.08	0.12	0.08	0.09	0.1009	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.153954	2.153954	NA	0.102093	0.08965	NA	0.123	NA	3.699607
1282	1	6209265	6209265	G	T	intronic	CHD5	NA	NA	NA	intronic	ENSG00000116254	NA	NA	NA	NA	NA	1p36.31	NA	NA	NA	NA	rs41279496	0.13	0.13	0.098	0.129992	0.0795	0.249	0.0692	0.0681	0.1861	0.08	0.26	0.09	0.07	0.1544	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.68097	NA	NA	0.066527	0.055581	NA	0.08	NA	3.699573
1282	12	59308003	59308003	C	T	intronic	LRIG3	NA	NA	NA	intronic	ENSG00000139263	NA	NA	NA	NA	NA	12q14.1	NA	NA	NA	NA	rs11172820	0.14	0.14	0.108	0.171925	0.0785	0.2698	0.268	0.0953	0.2025	0.08	0.21	0.22	0.1	0.136	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.731303	NA	NA	0.08593	0.102814	NA	0.152	NA	3.69957
1282	18	61160385	61160385	T	C	intronic	SERPINB5	NA	NA	NA	exonic	ENSG00000206075	NA	synonymous SNV	ENSG00000206075:ENST00000489441:exon5:c.T624C:p.D208D	NA	NA	18q21.33	NA	NA	NA	NA	rs2289521	0.44	0.44	0.412	0.383387	0.6123	0.3998	0.4611	0.1551	0.3845	0.62	0.38	0.52	0.14	0.5216	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.253194	NA	NA	NA	NA	NA	0.384	NA	3.6994333
1282	4	110453908	110453908	C	G	intronic	SEC24B	NA	NA	NA	intronic	ENSG00000138802	NA	NA	NA	NA	NA	4q25	NA	NA	NA	NA	rs34727629	0.04	0.04	0.051	0.0497204	0.0934	NA	0.0519	0.0287	0.0828	0.09	NA	0.06	0.02	0.1	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.847023	NA	NA	0.107299	0.038684	NA	0.08	NA	3.699301
1282	11	67160933	67160933	G	A	UTR5	RAD9A	NM_001243224:c.-28G>A	NA	NA	intronic	ENSG00000172613	NA	NA	NA	NA	NA	11q13.2	NA	NA	NA	NA	rs2066490	0.09	0.09	0.08	0.077476	0.163	0.0933	0.1095	0.0061	0.047	0.15	0.06	0.12	0.01	0.1358	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.745609	NA	NA	0.168685	0.038864	NA	0.022	NA	3.6991817
1282	4	96127869	96127869	T	G	exonic	UNC5C	NA	synonymous SNV	UNC5C:NM_003728:exon11:c.A1812C:p.P604P	exonic	ENSG00000182168	NA	synonymous SNV	ENSG00000182168:ENST00000453304:exon11:c.A1812C:p.P604P,ENSG00000182168:ENST00000513796:exon12:c.A1869C:p.P623P	NA	NA	4q22.3	NA	NA	NA	NA	rs2276322	0.56	0.56	0.533	0.528554	0.7068	0.3601	0.513	0.5514	0.499	0.7	0.34	0.56	0.59	0.5883	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.897106	NA	NA	0.672674	0.544031	NA	0.638	NA	3.6988926
1282	3	11925358	11925358	T	C	intergenic	TAMM41,SYN2	dist=37006;dist=120504	NA	NA	ncRNA_intronic	ENSG00000230342	NA	NA	NA	NA	NA	3p25.2	NA	NA	NA	NA	rs2470562	0.15	0.15	0.104	0.158946	0.3012	0.0089	0.2349	0.0756	0.226	0.28	0.01	0.2	0.07	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.758113	NA	NA	NA	NA	NA	0.159	NA	3.6988
1282	3	131404641	131404641	C	A	intronic	CPNE4	NA	NA	NA	intronic	ENSG00000196353	NA	NA	NA	NA	NA	3q22.1	NA	NA	NA	NA	rs6439315	0.25	0.25	0.26	0.252396	0.3012	0.1081	0.2493	0.32	0.2618	0.29	0.12	0.26	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.912157	NA	NA	NA	NA	NA	0.304	NA	3.6988
1282	7	142157389	142157389	G	A	intergenic	LOC730441,MTRNR2L6	dist=185321;dist=216742	NA	NA	ncRNA_exonic	ENSG00000227550	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs361397	0.29	0.29	0.25	0.298722	0.3012	0.2073	0.4222	0.264	0.3497	0.3	0.18	0.4	0.31	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.445417	NA	NA	NA	NA	NA	0.341	NA	3.6988
1282	12	49424616	49424616	G	A	intronic	MLL2	NA	NA	NA	intronic	ENSG00000167548	NA	NA	NA	NA	NA	12q13.12	NA	NA	NA	NA	rs11614738	0.26	0.26	0.22	0.274561	0.3012	0.4444	0.232	0.0234	0.4417	0.3	0.41	0.25	0.03	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.608087	1.608087	NA	NA	NA	NA	0.21	NA	3.6988
1282	12	49436724	49436724	A	G	intronic	MLL2	NA	NA	NA	intronic	ENSG00000167548	NA	NA	NA	NA	NA	12q13.12	NA	NA	NA	NA	rs12580349	0.28	0.28	0.271	0.302716	0.3012	0.4315	0.2478	0.1256	0.4499	0.3	0.39	0.27	0.12	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.763895	NA	NA	NA	NA	NA	0.254	NA	3.6988
1282	13	113465109	113465109	G	T	intronic	ATP11A	NA	NA	NA	intronic	ENSG00000068650	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs9577843	0.3	0.3	0.285	0.264177	0.3012	0.255	0.3069	0.2542	0.2188	0.31	0.28	0.34	0.26	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.892218	NA	NA	NA	NA	NA	0.297	NA	3.6988
1282	22	45927112	45927112	A	G	intronic	FBLN1	NA	NA	NA	intronic	ENSG00000077942	NA	NA	NA	NA	NA	22q13.31	NA	NA	NA	NA	rs2239844	0.1	0.1	0.071	0.109026	0.0964	0.0972	0.1556	0.0514	0.1789	0.11	0.1	0.14	0.05	0.1053	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.869271	NA	NA	0.099767	0.056287	ID=COSN166783;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.196	NA	3.698533
1282	6	29581011	29581011	T	G	intronic	GABBR1	NA	NA	NA	intronic	ENSG00000204681	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs29226	0.09	0.09	0.073	0.108826	0.0974	0.122	0.0807	0.0946	0.1462	0.08	0.12	0.08	0.09	0.1008	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.503589	NA	NA	0.103397	0.090338	NA	0.123	NA	3.698403
1282	8	74894748	74894748	A	G	UTR3	TMEM70	NM_017866:c.*892A>G,NM_001040613:c.*1365A>G	NA	NA	UTR3	ENSG00000175606	ENST00000312184:c.*892A>G	NA	NA	NA	NA	8q21.11	NA	NA	NA	NA	rs2291217	0.21	0.21	0.195	0.216254	0.2863	0.1925	0.232	0.115	0.2945	0.29	0.19	0.21	0.11	0.3488	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.60559	NA	NA	NA	NA	NA	0.268	NA	3.6982334
1282	2	160667004	160667004	G	A	intronic	LY75,LY75-CD302	NA	NA	NA	intronic	ENSG00000054219,ENSG00000248672	NA	NA	NA	NA	NA	2q24.2	NA	NA	NA	NA	rs35590513	0.07	0.07	0.058	0.0754792	0.1004	0.0129	0.0865	0.0613	0.1258	0.09	0.01	0.11	0.06	0.0997	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.543999	3.543999	NA	0.101744	0.076714	NA	0.043	NA	3.698156
1282	3	107937360	107937360	C	T	intronic	IFT57	NA	NA	NA	intronic	ENSG00000114446	NA	NA	NA	NA	NA	3q13.13	NA	NA	NA	NA	rs56273515	0.09	0.09	0.082	0.0902556	0.1064	0.1052	0.0836	0.0703	0.09	0.1	0.1	0.1	0.06	0.0906	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.074244	NA	NA	0.105	0.069678	ID=COSN166961;OCCURENCE=3(large_intestine)	0.08	NA	3.698
1282	16	706267	706267	G	A	intronic	WDR90	NA	NA	NA	intronic	ENSG00000161996	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs9933039	0.16	0.16	0.148	0.166733	0.0815	0.2956	0.1499	0.1846	0.1094	0.07	0.3	0.1	0.16	0.1365	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.657939	NA	NA	0.084022	0.134565	NA	0.087	NA	3.697978
1282	9	108612304	108612304	A	G	intergenic	TMEM38B,ZNF462	dist=73412;dist=1013074	NA	NA	ncRNA_exonic	ENSG00000228948	NA	NA	NA	NA	NA	9q31.2	NA	NA	NA	NA	rs9409069	0.48	0.48	0.285	0.482228	0.3022	0.623	0.4582	0.6188	0.3548	0.3	0.61	0.44	0.62	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.824196	NA	NA	NA	NA	NA	0.203	NA	3.6978
1282	10	61612199	61612199	T	C	intronic	CCDC6	NA	NA	NA	intronic	ENSG00000108091	NA	NA	NA	NA	NA	10q21.2	NA	NA	NA	NA	rs2271561	0.14	0.14	0.156	0.134385	0.3022	0.0258	0.1484	0.0166	0.2229	0.29	0.03	0.17	0.02	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.28684	3.28684	NA	NA	NA	NA	0.065	NA	3.6978
1282	10	119036625	119036625	T	C	intronic	SLC18A2	NA	NA	NA	intronic	ENSG00000165646	NA	NA	NA	NA	NA	10q25.3	NA	NA	NA	NA	rs363279	0.16	0.16	0.149	0.172125	0.0865	0.3393	0.1816	0.084	0.2004	0.08	0.31	0.17	0.09	0.1268	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.909526	NA	NA	0.089016	0.080118	ID=COSN163775;OCCURENCE=1(breast)	0.109	NA	3.697684
1282	12	81112882	81112882	A	C	UTR3	MYF5	NM_005593:c.*52A>C	NA	NA	UTR3	ENSG00000111049	ENST00000228644:c.*52A>C	NA	NA	NA	NA	12q21.31	NA	NA	NA	NA	rs11114581	0.11	0.11	0.094	0.10603	0.2237	0.0238	0.1196	0.0068	0.1943	0.23	0.03	0.14	0.01	0.1866	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.422523	NA	NA	0.22552	0.053504	NA	0.101	NA	3.6975134
1282	12	64383670	64383670	T	C	intronic	SRGAP1	NA	NA	NA	intronic	ENSG00000196935	NA	NA	NA	NA	NA	12q14.2	NA	NA	Name=87	NA	rs3741607	0.45	0.45	0.429	0.48722	0.4155	0.5397	0.5216	0.444	0.5409	0.42	0.52	0.48	0.39	0.4702	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.690131	1.690131	NA	0.416977	0.447571	NA	0.457	NA	3.697323
1282	2	103057892	103057892	A	G	intronic	IL18RAP	NA	NA	NA	intronic	ENSG00000115607	NA	NA	NA	NA	NA	2q12.1	NA	NA	NA	NA	rs11465702	0.09	0.09	0.083	0.0766773	0.1541	0.0129	0.0965	0.0598	0.0716	0.15	0.02	0.11	0.07	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.089137	NA	NA	0.148649	0.058526	NA	0.08	NA	3.697251
1282	2	30756196	30756196	A	G	intronic	LCLAT1	NA	NA	NA	intronic	ENSG00000172954	NA	NA	NA	NA	NA	2p23.1	NA	NA	NA	NA	rs829624	0.11	0.11	0.113	0.0954473	0.1093	0.1369	0.0403	0.0968	0.0757	0.12	0.12	0.05	0.14	0.0928	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.50783	NA	NA	0.100698	0.101906	NA	0.181	NA	3.697202
1282	2	68402012	68402012	G	T	UTR3	PNO1	NM_020143:c.*78G>T	NA	NA	UTR3	ENSG00000115946	ENST00000263657:c.*78G>T	NA	NA	NA	NA	2p14	NA	NA	NA	NA	rs1060842	0.73	0.73	0.717	0.771765	0.6362	0.6458	0.6873	0.9781	0.8221	0.65	0.65	0.68	0.98	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.172909	NA	NA	NA	NA	NA	0.797	NA	3.6971334
1282	1	149100045	149100045	C	T	intergenic	LOC645166,LOC388692	dist=146991;dist=179431	NA	NA	ncRNA_intronic	ENSG00000179571	NA	NA	NA	NA	NA	1q21.2	NA	NA	NA	NA	rs9438388	0.26	0.26	0.236	0.235823	0.3032	0.249	0.245	0.1815	0.2198	0.3	0.24	0.25	0.2	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.014784	NA	NA	NA	NA	NA	0.217	NA	3.6968
1282	10	88417724	88417724	C	T	intronic	OPN4	NA	NA	NA	intronic	ENSG00000122375	NA	NA	NA	NA	NA	10q23.2	NA	NA	NA	NA	rs10788521	0.22	0.22	0.194	0.236422	0.3032	0.2778	0.1758	0.062	0.4039	0.3	0.27	0.17	0.08	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.395166	NA	NA	NA	NA	NA	0.181	NA	3.6968
1282	15	85619248	85619248	C	T	intronic	PDE8A	NA	NA	NA	intronic	ENSG00000073417	NA	NA	NA	NA	NA	15q25.3	NA	NA	NA	NA	rs11631548	0.16	0.16	0.144	0.13119	0.3032	0.0466	0.1931	0.0166	0.1524	0.3	0.04	0.23	0.02	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.190618	NA	NA	NA	NA	NA	0.094	NA	3.6968
1282	19	1080189	1080189	G	C	intronic	HMHA1	NA	NA	NA	intronic	ENSG00000180448	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs2074453	0.42	0.42	0.399	0.438299	0.3032	0.5198	0.379	0.5363	0.4029	0.3	0.54	0.37	0.49	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.992187	NA	NA	NA	NA	NA	0.297	NA	3.6968
1282	19	58115503	58115503	A	G	intronic	ZNF530	NA	NA	NA	intronic	ENSG00000183647	NA	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs73062589	0.33	0.33	0.341	0.353035	0.3032	0.3155	0.2651	0.497	0.3108	0.3	0.25	0.27	0.51	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.167461	NA	NA	NA	NA	NA	0.348	NA	3.6968
1282	1	151748425	151748425	C	A	intronic	TDRKH	NA	NA	NA	intronic	ENSG00000182134	NA	NA	NA	NA	NA	1q21.3	NA	Name=MafK_(ab50322),MafF_(M8194)	NA	NA	rs3923394	0.54	0.54	0.559	0.516973	0.6531	0.3194	0.4251	0.6074	0.5235	0.66	0.35	0.48	0.63	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.377831	NA	NA	0.65022	0.640173	NA	0.464	NA	3.69668
1282	9	139912593	139912593	T	C	intronic	ABCA2	NA	NA	NA	intronic	ENSG00000107331	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs13283333	0.09	0.09	0.099	0.100639	0.1074	0.0327	0.098	0.1732	0.0675	0.09	0.04	0.09	0.16	0.0981	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.994227	NA	NA	0.09785	0.189883	NA	0.188	NA	3.69665
1282	6	31107733	31107733	C	T	UTR3	PSORS1C1	NM_014068:c.*24C>T	NA	NA	UTR3	ENSG00000204540	ENST00000259881:c.*24C>T,ENST00000547221:c.*24C>T,ENST00000481450:c.*24C>T	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs1966	0.24	0.24	0.214	0.252396	0.2097	0.3462	0.3329	0.1793	0.2413	0.21	0.29	0.31	0.18	0.2298	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.191778	NA	NA	0.197305	0.185308	NA	0.217	NA	3.6965284
1282	6	132168997	132168997	G	T	intronic	ENPP1	NA	NA	NA	intronic	ENSG00000197594	NA	NA	NA	NA	NA	6q23.2	NA	NA	NA	NA	rs7773477	0.08	0.08	0.065	0.104034	0.0557	0.0069	0.0476	0.2534	0.092	0.05	0.01	0.05	0.24	0.2037	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.678458	NA	NA	0.044302	0.201997	NA	0.116	NA	3.696298
1282	1	19504300	19504300	G	A	intronic	UBR4	NA	NA	NA	intronic	ENSG00000127481	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs2066002	0.35	0.35	0.314	0.333067	0.3042	0.629	0.4078	0.0946	0.3272	0.29	0.65	0.37	0.09	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.712278	NA	NA	NA	NA	NA	0.196	NA	3.6958
1282	3	62647904	62647904	T	C	intronic	CADPS	NA	NA	NA	intronic	ENSG00000163618	NA	NA	NA	NA	NA	3p14.2	NA	NA	NA	NA	rs11712073	0.21	0.21	0.202	0.21865	0.3042	0.003	0.2104	0.3487	0.183	0.29	0.01	0.2	0.32	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2629	NA	NA	NA	NA	NA	0.268	NA	3.6958
1282	4	113359883	113359883	A	T	intronic	ALPK1	NA	NA	NA	intronic	ENSG00000073331	NA	NA	NA	NA	NA	4q25	NA	NA	NA	NA	rs231248	0.32	0.32	0.28	0.300519	0.3042	0.4286	0.2666	0.1891	0.3395	0.33	0.42	0.28	0.22	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.760639	1.760639	NA	NA	NA	NA	0.283	NA	3.6958
1282	5	179291279	179291279	A	G	intronic	TBC1D9B	NA	NA	NA	intronic	ENSG00000197226	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs172056	0.52	0.52	0.507	0.545327	0.3042	0.6716	0.5375	0.6929	0.4693	0.29	0.69	0.47	0.72	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.873168	NA	NA	NA	NA	NA	0.428	NA	3.6958
1282	9	92017733	92017733	G	A	intronic	SEMA4D	NA	NA	NA	intronic	ENSG00000187764	NA	NA	NA	NA	NA	9q22.2	NA	NA	NA	NA	rs41287361	0.24	0.24	0.233	0.221246	0.3042	0.2331	0.2421	0.1089	0.2607	0.3	0.25	0.26	0.12	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.477977	NA	NA	NA	NA	NA	0.232	NA	3.6958
1282	9	130931586	130931586	C	A	intronic	CIZ1	NA	NA	NA	intronic	ENSG00000148337	NA	NA	NA	NA	NA	9q34.11	NA	NA	NA	NA	rs10987905	0.17	0.17	0.158	0.161941	0.3042	0.0377	0.1787	0.1263	0.18	0.29	0.03	0.18	0.14	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.858023	NA	NA	NA	NA	NA	0.094	NA	3.6958
1282	10	97949572	97949572	A	C	intergenic	ZNF518A,BLNK	dist=26055;dist=1883	NA	NA	ncRNA_exonic	ENSG00000229417	NA	NA	NA	NA	NA	10q24.1	NA	NA	NA	NA	rs11188656	0.18	0.18	0.151	0.158347	0.3042	0.0238	0.3329	0.0159	0.2157	0.31	0.03	0.35	0.03	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.214882	NA	NA	NA	NA	NA	0.123	NA	3.6958
1282	11	3436211	3436211	G	A	intergenic	LOC650368,TRPC2	dist=5833;dist=211479	NA	NA	ncRNA_exonic	ENSG00000166492	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs7118203	0.35	0.35	0.324	0.339856	0.3042	0.4692	0.3674	0.2277	0.3753	0.3	0.49	0.35	0.26	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.920631	NA	NA	NA	NA	NA	0.152	NA	3.6958
1282	11	3436392	3436392	G	A	intergenic	LOC650368,TRPC2	dist=6014;dist=211298	NA	NA	ncRNA_intronic	ENSG00000166492	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs10833983	0.36	0.36	0.349	0.35603	0.3042	0.4683	0.3718	0.2874	0.3753	0.3	0.49	0.35	0.33	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.741367	NA	NA	NA	NA	NA	0.326	NA	3.6958
1282	18	34323855	34323855	T	C	intronic	FHOD3	NA	NA	NA	intronic	ENSG00000134775	NA	NA	NA	NA	NA	18q12.2	NA	NA	NA	NA	rs11878091	0.34	0.34	0.326	0.377995	0.3042	0.3244	0.389	0.4123	0.455	0.29	0.33	0.36	0.39	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.352638	NA	NA	NA	NA	NA	0.391	NA	3.6958
1282	14	51371121	51371121	C	T	UTR3	ABHD12B	NM_181814:c.*37C>T,NM_001206673:c.*37C>T	NA	NA	UTR3	ENSG00000131969	ENST00000395752:c.*37C>T,ENST00000557345:c.*639C>T,ENST00000337334:c.*37C>T,ENST00000382029:c.*815C>T,ENST00000353130:c.*37C>T	NA	NA	NA	NA	14q22.1	NA	NA	NA	NA	rs4901065	0.3	0.3	0.279	0.283746	0.2028	0.4573	0.3876	0.1649	0.2751	0.21	0.47	0.38	0.18	0.2442	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.483721	NA	NA	0.191047	0.1532	NA	0.188	NA	3.6952864
1282	3	107884269	107884269	A	G	intronic	IFT57	NA	NA	NA	intronic	ENSG00000114446	NA	NA	NA	NA	NA	3q13.12	NA	NA	NA	NA	rs62264150	0.09	0.09	0.083	0.0954473	0.1074	0.1052	0.085	0.0855	0.0941	0.1	0.1	0.1	0.07	0.0915	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.42733	NA	NA	0.10593	0.087154	NA	0.08	NA	3.69517
1283	1	32119431	32119431	T	C	intronic	COL16A1	NA	NA	NA	ncRNA_intronic	ENSG00000235790	NA	NA	NA	NA	NA	1p35.2	NA	Name=ZNF263	NA	NA	rs3817398	0.39	0.39	0.379	0.404952	0.5656	0.2173	0.4899	0.2837	0.5368	0.55	0.22	0.5	0.26	0.5107	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.459767	NA	NA	0.56208	0.308004	NA	0.493	NA	3.6949533
1283	1	7838113	7838113	A	C	intronic	VAMP3	NA	NA	NA	intronic	ENSG00000049245	NA	NA	NA	NA	NA	1p36.23	NA	NA	NA	NA	rs697675	0.14	0.14	0.126	0.126198	0.1561	0.0556	0.098	0.2398	0.0348	0.16	0.04	0.12	0.23	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.080648	NA	NA	0.148963	0.227601	NA	0.109	NA	3.694937
1283	2	74604895	74604895	T	C	intronic	DCTN1	NA	NA	NA	intronic	ENSG00000204843	NA	NA	NA	NA	NA	2p13.1	NA	NA	NA	NA	rs3815241	0.19	0.19	0.194	0.19369	0.0905	0.4276	0.1124	0.1172	0.2198	0.09	0.45	0.11	0.1	0.1285	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.680966	2.680966	NA	0.086087	0.114195	NA	0.123	NA	3.694913
1283	3	1444243	1444243	A	G	intronic	CNTN6	NA	NA	NA	intronic	ENSG00000134115	NA	NA	NA	NA	NA	3p26.3	NA	NA	NA	NA	rs13326014	0.21	0.21	0.211	0.19389	0.3052	0.0089	0.2334	0.2405	0.1789	0.31	0.01	0.25	0.25	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.72433	NA	NA	NA	NA	NA	0.174	NA	3.6948
1283	17	7990555	7990555	G	C	intronic	ALOX12B	NA	NA	NA	intronic	ENSG00000179477	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs76102404	NA	NA	0.013	0.282548	0.3052	0.2054	0.3184	0.3374	0.2393	NA	NA	NA	NA	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.817692	NA	NA	NA	NA	NA	0.174	NA	3.6948
1283	19	14772984	14772984	G	T	intronic	EMR3	NA	NA	NA	intronic	ENSG00000131355	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs8111916	0.29	0.29	0.294	0.291733	0.3052	0.2649	0.2003	0.3419	0.3027	0.29	0.24	0.23	0.38	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.483533	NA	NA	NA	NA	NA	0.312	NA	3.6948
1283	19	7976127	7976127	C	G	intronic	MAP2K7	NA	NA	NA	intronic	ENSG00000076984	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs56358830	0.11	0.11	0.102	0.103235	0.0895	0.1954	0.1239	0.0234	0.1155	0.11	0.18	0.12	0.02	0.1167	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.896404	NA	NA	0.099583	0.038085	NA	0.109	NA	3.694217
1283	3	183909163	183909163	C	T	intronic	ABCF3	NA	NA	NA	intronic	ENSG00000145191,ENSG00000161204	NA	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs843339	0.34	0.34	0.32	0.337061	0.3062	0.5437	0.2983	0.1589	0.4243	0.3	0.56	0.3	0.16	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.624508	NA	NA	NA	NA	NA	0.232	NA	3.6938
1283	3	195937977	195937977	A	G	intronic	ZDHHC19	NA	NA	NA	intronic	ENSG00000163958	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs13079891	0.27	0.27	0.247	0.288339	0.3062	0.4395	0.3228	0.0378	0.4284	0.31	0.4	0.31	0.05	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.521147	NA	NA	NA	NA	NA	0.188	NA	3.6938
1283	7	77255941	77255941	T	C	intronic	PTPN12	NA	NA	NA	intronic	ENSG00000127947	NA	NA	NA	NA	NA	7q11.23	NA	NA	NA	NA	rs17467232	0.22	0.22	0.213	0.228435	0.3062	0.1766	0.2291	0.1702	0.2802	0.3	0.19	0.19	0.16	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.191488	NA	NA	NA	NA	NA	0.254	NA	3.6938
1283	7	134552634	134552634	G	A	intronic	CALD1	NA	NA	NA	intronic	ENSG00000122786	NA	NA	NA	NA	NA	7q33	NA	NA	NA	NA	rs1452911	0.34	0.34	0.304	0.283147	0.3062	0.6587	0.3718	0.0121	0.1759	0.31	0.65	0.38	0.02	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.253965	NA	NA	NA	NA	NA	0.196	NA	3.6938
1283	16	24567320	24567320	A	G	intronic	RBBP6	NA	NA	NA	intronic	ENSG00000122257	NA	NA	NA	NA	NA	16p12.1	NA	NA	NA	NA	rs7202501	0.3	0.3	0.277	0.292732	0.3062	0.2649	0.379	0.2776	0.2669	0.31	0.28	0.33	0.31	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.903368	NA	NA	NA	NA	NA	0.312	NA	3.6938
1283	16	24570757	24570757	T	C	intronic	RBBP6	NA	NA	NA	intronic	ENSG00000122257	NA	NA	NA	NA	NA	16p12.1	NA	NA	NA	NA	rs3815906	0.26	0.26	0.22	0.242212	0.3062	0.2649	0.3631	0.0946	0.2669	0.31	0.28	0.32	0.12	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.449824	NA	NA	NA	NA	NA	0.232	NA	3.6938
1283	16	28618545	28618545	G	T	intronic	SULT1A1	NA	NA	NA	intronic	ENSG00000196502	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs2925624	0.23	0.23	0.165	0.23123	0.3062	0.0843	0.3876	0.2284	0.1984	0.32	0.09	0.3	0.2	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.553094	NA	0	NA	NA	NA	0.145	NA	3.6938
1283	22	41621714	41621714	G	A	intronic	L3MBTL2	NA	NA	NA	intronic	ENSG00000100395	NA	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs2179744	0.35	0.35	0.3	0.371805	0.3062	0.4206	0.4769	0.3116	0.3957	0.31	0.35	0.48	0.34	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.02469	NA	NA	NA	NA	NA	0.428	NA	3.6938
1283	20	62305274	62305274	G	A	ncRNA_intronic	RTEL1-TNFRSF6B	NA	NA	NA	intronic	ENSG00000026036,ENSG00000258366	NA	NA	NA	NA	NA	20q13.33	NA	NA	NA	NA	rs2297437	0.25	0.25	0.235	0.29373	0.1909	0.1667	0.3256	0.3759	0.3967	0.18	0.16	0.33	0.4	0.2491	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.019715	NA	NA	0.199651	0.350204	NA	0.326	NA	3.6936823
1283	14	70712274	70712274	A	G	downstream	ADAM21P1	NA	NA	NA	ncRNA_exonic	ENSG00000235812	NA	NA	NA	NA	NA	14q24.2	NA	NA	NA	NA	rs1812858	0.33	0.33	0.285	0.336661	0.4732	0.1677	0.4957	0.1785	0.4714	0.48	0.17	0.48	0.19	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.281904	NA	NA	NA	NA	NA	0.283	NA	3.6934666
1283	4	27004011	27004011	G	A	exonic	STIM2	NA	synonymous SNV	STIM2:NM_001169117:exon6:c.G798A:p.Q266Q,STIM2:NM_001169118:exon6:c.G798A:p.Q266Q,STIM2:NM_020860:exon6:c.G798A:p.Q266Q	exonic	ENSG00000109689	NA	synonymous SNV	ENSG00000109689:ENST00000237364:exon6:c.G1059A:p.Q353Q,ENSG00000109689:ENST00000382009:exon6:c.G1059A:p.Q353Q,ENSG00000109689:ENST00000412829:exon6:c.G1059A:p.Q353Q,ENSG00000109689:ENST00000463501:exon6:c.G639A:p.Q213Q,ENSG00000109689:ENST00000465503:exon6:c.G798A:p.Q266Q,ENSG00000109689:ENST00000467011:exon6:c.G798A:p.Q266Q,ENSG00000109689:ENST00000467087:exon6:c.G798A:p.Q266Q	Score=532;Name=lod=194	NA	4p15.2	NA	NA	NA	NA	rs10028164	0.98	0.98	0.977	0.977636	0.993	1	0.9683	0.9387	0.998	0.99	1	0.96	0.94	0.9884	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.691579	NA	NA	0.99186	0.937585	NA	0.957	NA	3.6934066
1283	20	1638231	1638231	G	A	intronic	SIRPG	NA	NA	NA	intronic	ENSG00000089012	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs66989667	0.11	0.11	0.114	0.0954473	0.1481	0.0437	0.0836	0.1422	0.0399	0.14	0.05	0.1	0.14	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.781694	NA	NA	0.158705	0.12789	NA	0.13	NA	3.693195
1283	20	29978212	29978212	G	C	intronic	DEFB119	NA	NA	NA	intronic	ENSG00000180483	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs73108009	0.05	0.05	0.051	0.043131	0.1113	0.001	0.0432	0.0227	0.044	0.1	NA	0.06	0.01	0.0837	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.27546	NA	NA	0.11186	0.049024	NA	0.029	NA	3.69314
1283	1	229750343	229750343	T	G	intronic	TAF5L	NA	NA	NA	intronic	ENSG00000135801	NA	NA	NA	NA	NA	1q42.13	NA	NA	NA	NA	rs2273574	0.26	0.26	0.242	0.26278	0.3072	0.3085	0.2248	0.0893	0.4315	0.31	0.31	0.28	0.09	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.857221	NA	NA	NA	NA	NA	0.196	NA	3.6928
1283	4	56448110	56448110	G	A	intronic	PDCL2	NA	NA	NA	intronic	ENSG00000163440	NA	NA	NA	NA	NA	4q12	NA	NA	NA	NA	rs62310866	0.2	0.2	0.154	0.207468	0.3072	0.1012	0.2248	0.0696	0.3885	0.31	0.1	0.26	0.08	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.687082	NA	NA	NA	NA	NA	0.203	NA	3.6928
1283	4	146297328	146297328	G	A	intergenic	OTUD4,SMAD1	dist=196496;dist=105623	NA	NA	ncRNA_exonic	ENSG00000251333	NA	NA	NA	NA	NA	4q31.21	NA	NA	NA	NA	rs2044276	0.27	0.27	0.262	0.299121	0.3072	0.2986	0.2968	0.1997	0.4274	0.31	0.27	0.28	0.22	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.345666	NA	NA	NA	NA	NA	0.341	NA	3.6928
1283	14	81470024	81470024	A	G	intronic	TSHR	NA	NA	NA	intronic	ENSG00000165409	NA	NA	NA	NA	NA	14q31.1	NA	NA	NA	NA	rs55960644	0.38	0.38	0.363	0.357628	0.3072	0.5496	0.4467	0.2443	0.3016	0.31	0.57	0.4	0.25	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.21821	NA	NA	NA	NA	NA	0.478	NA	3.6928
1283	15	22789021	22789021	T	C	intergenic	GOLGA6L1,TUBGCP5	dist=43019;dist=44374	NA	NA	ncRNA_intronic	ENSG00000259400	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs12102024	0.41	0.41	0.404	0.390775	0.3072	0.4048	0.2738	0.5794	0.2904	0.3	0.44	0.3	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.033655	NA	NA	NA	NA	NA	0.348	NA	3.6928
1283	15	57896366	57896366	A	T	intronic	GCOM1,MYZAP	NA	NA	NA	intronic	ENSG00000137878,ENSG00000255529,ENSG00000263155	NA	NA	NA	NA	NA	15q21.3	NA	NA	NA	NA	rs2172611	0.42	0.42	0.416	0.452077	0.3072	0.5486	0.428	0.4977	0.4571	0.3	0.52	0.4	0.51	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.018246	NA	NA	NA	NA	NA	0.486	NA	3.6928
1283	20	31876485	31876485	T	C	intronic	BPIFB1	NA	NA	NA	intronic	ENSG00000125999	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs2295576	0.43	0.43	0.469	0.433706	0.3072	0.244	0.4337	0.8654	0.1759	0.29	0.26	0.43	0.83	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.121878	NA	NA	NA	NA	NA	0.449	NA	3.6928
1283	1	228431095	228431095	A	G	exonic	OBSCN	NA	synonymous SNV	OBSCN:NM_001098623:exon10:c.A3141G:p.T1047T,OBSCN:NM_052843:exon10:c.A3141G:p.T1047T,OBSCN:NM_001271223:exon11:c.A3417G:p.T1139T	exonic	ENSG00000154358	NA	synonymous SNV	ENSG00000154358:ENST00000284548:exon10:c.A3141G:p.T1047T,ENSG00000154358:ENST00000422127:exon10:c.A3141G:p.T1047T,ENSG00000154358:ENST00000570156:exon11:c.A3417G:p.T1139T	NA	NA	1q42.13	NA	NA	NA	NA	rs1771455	0.63	0.63	0.603	0.616613	0.6412	0.5992	0.6542	0.7095	0.4571	0.63	0.59	0.64	0.65	0.6499	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.076205	NA	NA	0.682791	0.735492	NA	0.601	NA	3.6927756
1283	14	20824859	20824859	T	C	intronic	PARP2	NA	NA	NA	intronic	ENSG00000129484	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs878156	0.2	0.2	0.198	0.228035	0.0915	0.1925	0.1744	0.4387	0.1585	0.09	0.17	0.16	0.42	0.1331	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.541644	1.541644	NA	0.08299	0.376324	NA	0.159	NA	3.69241
1283	1	228434395	228434395	T	C	exonic	OBSCN	NA	synonymous SNV	OBSCN:NM_001098623:exon13:c.T3924C:p.A1308A,OBSCN:NM_052843:exon13:c.T3924C:p.A1308A,OBSCN:NM_001271223:exon14:c.T4200C:p.A1400A	exonic	ENSG00000154358	NA	synonymous SNV	ENSG00000154358:ENST00000284548:exon13:c.T3924C:p.A1308A,ENSG00000154358:ENST00000422127:exon13:c.T3924C:p.A1308A,ENSG00000154358:ENST00000570156:exon14:c.T4200C:p.A1400A	NA	NA	1q42.13	NA	NA	NA	NA	rs7517088	0.63	0.63	0.581	0.617612	0.6412	0.5992	0.6542	0.7133	0.4571	0.63	0.59	0.64	0.65	0.6498	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.138325	NA	NA	0.683298	0.730937	ID=COSM146810;OCCURENCE=1(stomach)	0.616	NA	3.6923686
1283	19	58929200	58929200	A	C	UTR3	ZNF584	NM_173548:c.*49A>C	NA	NA	UTR3	ENSG00000171574	ENST00000306910:c.*49A>C,ENST00000593920:c.*49A>C,ENST00000599238:c.*1046A>C	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs35652377	0.16	0.16	0.171	0.15016	0.2485	0.0546	0.1772	0.118	0.1718	0.23	0.06	0.19	0.15	0.1861	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.887325	NA	NA	0.206491	0.115751	NA	0.181	NA	3.6922424
1283	19	46733912	46733912	A	G	ncRNA_intronic	RNU6-66P	NA	NA	NA	intronic	ENSG00000188293	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs2286802	0.55	0.55	0.569	0.53754	0.6412	0.5188	0.4135	0.5212	0.5603	0.63	0.51	0.48	0.54	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.974668	NA	NA	NA	NA	NA	0.522	NA	3.6921333
1283	19	46733916	46733916	G	A	ncRNA_intronic	RNU6-66P	NA	NA	NA	intronic	ENSG00000188293	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs2286803	0.55	0.55	0.562	0.536342	0.6412	0.5169	0.4135	0.5197	0.5583	0.63	0.51	0.48	0.53	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.430776	NA	NA	NA	NA	NA	0.522	NA	3.6921333
1283	16	20634775	20634775	T	C	UTR3	ACSM1	NM_052956:c.*33A>G	NA	NA	UTR3	ENSG00000166743	ENST00000219151:c.*33A>G,ENST00000307493:c.*33A>G,ENST00000519745:c.*820A>G,ENST00000524149:c.*33A>G	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs3087812	0.31	0.31	0.322	0.346645	0.1799	0.3492	0.1916	0.5424	0.3609	0.2	0.34	0.2	0.52	0.2603	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.146767	NA	NA	0.201047	0.497047	NA	0.355	NA	3.6920864
1283	12	123810873	123810873	G	A	exonic	SBNO1	NA	synonymous SNV	SBNO1:NM_001167856:exon13:c.C1701T:p.I567I,SBNO1:NM_018183:exon13:c.C1698T:p.I566I	exonic	ENSG00000139697	NA	synonymous SNV	ENSG00000139697:ENST00000267176:exon13:c.C1698T:p.I566I,ENSG00000139697:ENST00000420886:exon13:c.C1701T:p.I567I,ENSG00000139697:ENST00000602398:exon14:c.C1701T:p.I567I,ENSG00000139697:ENST00000602750:exon14:c.C1698T:p.I566I	NA	NA	12q24.31	NA	NA	NA	NA	rs61388686	0.53	0.53	0.484	0.493411	0.664	0.7004	0.5836	0.0567	0.6309	0.67	0.7	0.59	0.08	0.6166	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.951594	NA	NA	0.694186	0.157286	NA	0.42	NA	3.6918806
1283	17	66147562	66147562	C	G	intergenic	LINC00674,LOC440461	dist=15492;dist=47239	NA	NA	ncRNA_intronic	ENSG00000267023	NA	NA	NA	NA	NA	17q24.2	NA	NA	NA	NA	rs6501520	0.45	0.45	0.44	0.48722	0.3082	0.4226	0.3876	0.73	0.4806	0.31	0.47	0.42	0.69	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.017364	NA	NA	NA	NA	NA	0.536	NA	3.6918
1283	1	204945618	204945618	G	A	intronic	NFASC	NA	NA	NA	intronic	ENSG00000163531	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs12124296	0.22	0.22	0.211	0.213259	0.3082	0.2649	0.2219	0.0424	0.2873	0.31	0.22	0.27	0.05	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.206355	NA	0.09	NA	NA	NA	0.246	NA	3.6918
1283	3	49765483	49765483	C	G	intronic	IP6K1	NA	NA	NA	intronic	ENSG00000176095	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs2307021	0.2	0.2	0.206	0.209465	0.3082	0.1538	0.1931	0.1044	0.319	0.3	0.17	0.19	0.09	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.015963	2.015963	NA	NA	NA	NA	0.138	NA	3.6918
1283	6	123319382	123319382	C	T	intronic	CLVS2	NA	NA	NA	intronic	ENSG00000146352	NA	NA	NA	NA	NA	6q22.31	NA	NA	NA	NA	rs11154131	0.21	0.21	0.208	0.168131	0.3082	0.0933	0.2349	0.1498	0.0787	0.3	0.11	0.27	0.16	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.887018	NA	NA	NA	NA	NA	0.225	NA	3.6918
1283	19	35260281	35260281	G	A	intronic	ZNF599	NA	NA	NA	intronic	ENSG00000153896	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs2242129	0.29	0.29	0.29	0.309505	0.3082	0.1865	0.3285	0.4002	0.3016	0.31	0.16	0.31	0.38	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.736605	NA	NA	NA	NA	NA	0.304	NA	3.6918
1283	19	53122472	53122472	T	G	intronic	ZNF83	NA	NA	NA	intronic	ENSG00000167766	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs35706759	0.4	0.4	0.327	0.363618	0.3082	0.5595	0.4957	0.3056	0.2035	0.31	0.58	0.42	0.3	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.23413	NA	NA	NA	NA	NA	0.275	NA	3.6918
1283	4	138449812	138449812	C	G	intronic	PCDH18	NA	NA	NA	intronic	ENSG00000189184	NA	NA	NA	NA	NA	4q28.3	NA	Name=GATA-2	NA	NA	rs10006580	0.52	0.52	0.536	0.552516	0.4155	0.5079	0.4452	0.8336	0.4356	0.41	0.49	0.41	0.83	0.4714	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.243634	NA	NA	0.421395	0.756241	NA	0.667	NA	3.691705
1283	3	197597194	197597194	A	G	intronic	LRCH3	NA	NA	NA	intronic	ENSG00000186001	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs11185486	0.16	0.16	0.159	0.177316	0.0974	0.244	0.1282	0.2474	0.1309	0.1	0.22	0.11	0.22	0.1172	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.814756	NA	NA	0.093721	0.231956	NA	0.123	NA	3.691679
1283	16	4940809	4940809	A	G	exonic	PPL	NA	synonymous SNV	PPL:NM_002705:exon17:c.T2082C:p.C694C	exonic	ENSG00000118898	NA	synonymous SNV	ENSG00000118898:ENST00000592772:exon5:c.T345C:p.C115C,ENSG00000118898:ENST00000345988:exon17:c.T2082C:p.C694C,ENSG00000118898:ENST00000590782:exon17:c.T2076C:p.C692C	Score=539;Name=lod=206	NA	16p13.3	NA	NA	NA	NA	rs2471844	0.93	0.93	0.926	0.928914	0.997	1	0.9769	0.7451	1	1	1	0.98	0.73	0.9793	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.873951	NA	NA	0.99872	0.779197	NA	0.942	NA	3.6916466
1283	X	1419571	1419571	C	G	intronic	CSF2RA	NA	NA	NA	intronic	ENSG00000198223	NA	NA	NA	NA	NA	Xp22.33	NA	Name=USF-1,TBP,NANOG_(SC-33759)	NA	NA	rs28484864	0.73	0.73	NA	NA	NA	NA	NA	NA	NA	0.65	0.79	0.8	0.72	0.6748	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.975126	NA	NA	0.634056	0.727958	NA	0.645	NA	3.691144
1283	6	24871032	24871032	G	A	intronic	FAM65B	NA	NA	NA	intronic	ENSG00000111913	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs2817749	0.18	0.18	0.149	0.18111	0.1511	0.1597	0.1945	0.1936	0.2076	0.16	0.19	0.17	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.325346	NA	NA	0.157762	0.177023	NA	0.13	NA	3.691138
1283	15	45444518	45444518	A	G	exonic	DUOX1	NA	synonymous SNV	DUOX1:NM_175940:exon25:c.A3228G:p.T1076T,DUOX1:NM_017434:exon26:c.A3228G:p.T1076T	exonic	ENSG00000137857	NA	synonymous SNV	ENSG00000137857:ENST00000561166:exon15:c.A2166G:p.T722T,ENSG00000137857:ENST00000389037:exon25:c.A3228G:p.T1076T,ENSG00000137857:ENST00000321429:exon26:c.A3228G:p.T1076T	NA	NA	15q21.1	NA	NA	NA	NA	rs1706804	0.56	0.56	0.558	0.576677	0.665	0.4921	0.513	0.466	0.7679	0.67	0.46	0.57	0.49	0.6327	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.867161	NA	NA	0.677873	0.481574	ID=COSM147897;OCCURENCE=1(stomach)	0.587	NA	3.6910936
1283	1	111892905	111892905	T	C	intronic	PIFO	NA	NA	NA	intronic	ENSG00000173947	NA	NA	NA	NA	NA	1p13.2	NA	NA	NA	NA	rs3820443	0.33	0.33	0.35	0.346246	0.3091	0.3661	0.1888	0.3949	0.41	0.32	0.35	0.24	0.38	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.482558	NA	NA	NA	NA	ID=COSN163185;OCCURENCE=1(breast)	0.261	NA	3.6909
1283	2	242542298	242542298	T	C	intronic	THAP4	NA	NA	NA	intronic	ENSG00000176946	NA	NA	NA	NA	NA	2q37.3	NA	NA	NA	NA	rs6437269	0.36	0.36	0.372	0.398163	0.3091	0.4306	0.3415	0.4054	0.4867	0.29	0.4	0.33	0.43	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.731258	NA	NA	NA	NA	NA	0.464	NA	3.6909
1283	3	49735746	49735746	C	G	intronic	RNF123	NA	NA	NA	intronic	ENSG00000164068	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs11130214	0.23	0.23	0.239	0.2498	0.3091	0.1518	0.2061	0.2511	0.319	0.3	0.17	0.2	0.22	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.303428	NA	NA	NA	NA	NA	0.181	NA	3.6909
1283	5	101816228	101816228	G	A	intronic	SLCO6A1	NA	NA	NA	intronic	ENSG00000205359	NA	NA	NA	NA	NA	5q21.1	NA	NA	NA	NA	rs10041652	0.18	0.18	0.142	0.154353	0.3091	0.1468	0.1671	0.0219	0.1728	0.3	0.14	0.2	0.03	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.090514	NA	NA	NA	NA	NA	0.239	NA	3.6909
1283	5	136969637	136969637	A	G	intronic	KLHL3	NA	NA	NA	intronic	ENSG00000146021	NA	NA	NA	NA	NA	5q31.2	NA	NA	NA	NA	rs7713180	0.4	0.4	0.39	0.395168	0.3091	0.4891	0.2896	0.5045	0.3139	0.31	0.51	0.3	0.47	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.64321	NA	NA	NA	NA	NA	0.319	NA	3.6909
1283	8	23307580	23307580	G	T	intronic	ENTPD4	NA	NA	NA	intronic	ENSG00000197217	NA	NA	NA	NA	NA	8p21.2	NA	NA	NA	NA	rs11777391	0.36	0.36	0.36	0.376997	0.3091	0.4355	0.2608	0.4221	0.408	0.31	0.44	0.28	0.42	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.909045	1.909045	NA	NA	NA	NA	0.471	NA	3.6909
1283	8	110439150	110439150	A	G	intronic	PKHD1L1	NA	NA	NA	intronic	ENSG00000205038	NA	NA	NA	NA	NA	8q23.1	NA	NA	NA	NA	rs13264576	0.32	0.32	0.227	0.310903	0.3091	0.3929	0.4755	0.146	0.3344	0.3	0.41	0.42	0.16	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.455755	NA	NA	NA	NA	NA	0.297	NA	3.6909
1283	8	110439166	110439166	A	G	intronic	PKHD1L1	NA	NA	NA	intronic	ENSG00000205038	NA	NA	NA	NA	NA	8q23.1	NA	NA	NA	NA	rs13264587	0.32	0.32	0.246	0.310903	0.3091	0.3929	0.4755	0.146	0.3344	0.31	0.41	0.42	0.16	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.570188	NA	NA	NA	NA	NA	0.29	NA	3.6909
1283	10	81065201	81065201	G	A	intronic	ZMIZ1	NA	NA	NA	intronic	ENSG00000108175	NA	NA	NA	NA	NA	10q22.3	NA	NA	NA	NA	rs1250558	0.28	0.28	0.247	0.260184	0.3091	0.4147	0.2536	0.0159	0.3855	0.31	0.48	0.26	0.02	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.639356	NA	NA	NA	NA	NA	0.283	NA	3.6909
1283	12	6969731	6969731	A	G	intronic	USP5	NA	NA	NA	intronic	ENSG00000111667	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs2071059	0.3	0.3	0.29	0.310503	0.3091	0.1994	0.2666	0.4334	0.2914	0.31	0.17	0.32	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.296885	NA	NA	NA	NA	NA	0.246	NA	3.6909
1283	13	32818070	32818070	A	G	intronic	FRY	NA	NA	NA	intronic	ENSG00000073910	NA	NA	NA	NA	NA	13q13.1	NA	NA	NA	NA	rs2806624	0.16	0.16	0.126	0.127796	0.3091	0.004	0.2176	0.0234	0.1462	0.32	0.01	0.23	0.02	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.433559	NA	NA	NA	NA	NA	0.072	NA	3.6909
1283	19	15038355	15038355	G	T	intergenic	OR7A17,OR7C2	dist=46188;dist=13946	NA	NA	ncRNA_exonic	ENSG00000176923	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs4808693	0.29	0.29	0.258	0.259185	0.3091	0.4435	0.255	0.0726	0.273	0.31	0.43	0.28	0.08	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.358099	NA	NA	NA	NA	NA	0.239	NA	3.6909
1283	19	15038586	15038586	T	C	intergenic	OR7A17,OR7C2	dist=46419;dist=13715	NA	NA	ncRNA_exonic	ENSG00000176923	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs4808694	0.28	0.28	0.252	0.258786	0.3091	0.4435	0.255	0.0711	0.273	0.31	0.43	0.28	0.08	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.787843	2.787843	NA	NA	NA	NA	0.232	NA	3.6909
1283	19	49621423	49621423	C	T	intronic	LIN7B	NA	NA	NA	intronic	ENSG00000104863	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs4801794	0.21	0.21	0.211	0.22504	0.3091	0.0575	0.1628	0.2496	0.3221	0.31	0.06	0.19	0.24	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.130905	NA	NA	NA	NA	NA	0.167	NA	3.6909
1283	2	44172444	44172444	A	C	intronic	LRPPRC	NA	NA	NA	intronic	ENSG00000138095	NA	NA	NA	NA	NA	2p21	NA	NA	Name=5	NA	rs28394191	0.61	0.61	0.6	0.607628	0.4125	0.9633	0.585	0.5522	0.5327	0.4	0.96	0.52	0.59	0.4959	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.899405	2.899405	NA	0.400791	0.544258	NA	0.558	NA	3.690809
1283	5	132267859	132267859	A	T	intronic	AFF4	NA	NA	NA	intronic	ENSG00000072364	NA	NA	NA	NA	NA	5q31.1	NA	NA	NA	NA	rs56157864	0.1	0.1	NA	0.105232	0.1451	0.1141	0.0937	0.0144	0.1861	0.14	0.12	0.11	0.02	0.1643	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.42279	NA	NA	NA	NA	NA	NA	NA	3.6906
1283	10	50902469	50902469	T	G	intronic	C10orf53	NA	NA	NA	UTR3	ENSG00000178645	ENST00000374113:c.*465T>G	NA	NA	NA	NA	10q11.23	NA	NA	NA	NA	rs2278561	0.37	0.37	0.367	0.35603	0.4761	0.1409	0.3732	0.3707	0.4223	0.5	0.16	0.36	0.4	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.37407	1.37407	NA	NA	NA	NA	0.486	NA	3.6905667
1283	5	7757705	7757705	T	C	intronic	ADCY2	NA	NA	NA	intronic	ENSG00000078295	NA	NA	NA	NA	NA	5p15.31	Score=841;Name=V$OCT1_05	NA	NA	NA	rs4072341	0.47	0.47	0.445	0.488019	0.4324	0.3423	0.5922	0.7012	0.3333	0.41	0.32	0.53	0.7	0.4485	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.678914	NA	NA	0.428605	0.678847	NA	0.37	NA	3.690495
1283	20	20208850	20208850	C	T	intronic	C20orf26	NA	NA	NA	intronic	ENSG00000089101	NA	NA	NA	NA	NA	20p11.23	NA	NA	NA	NA	rs10485596	0.07	0.07	0.054	0.0814696	0.0964	0.0595	0.1167	0.0182	0.1493	0.1	0.05	0.11	0.01	0.1079	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.313778	NA	NA	0.105465	0.038357	NA	0.109	NA	3.690235
1283	20	25276343	25276343	G	A	intronic	ABHD12,PYGB	NA	NA	NA	intronic	ENSG00000100994,ENSG00000100997	NA	NA	NA	NA	NA	20p11.21	NA	NA	Name=7	NA	rs2258728	0.55	0.55	0.527	0.533147	0.4284	0.9107	0.3372	0.4501	0.5031	0.43	0.93	0.35	0.44	0.4555	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.559829	NA	NA	0.426047	0.42828	NA	0.486	NA	3.690053
1283	3	172994628	172994628	T	G	intergenic	SPATA16,NLGN1	dist=135570;dist=121616	NA	NA	ncRNA_intronic	ENSG00000237473	NA	NA	NA	NA	NA	3q26.31	NA	NA	NA	NA	rs4894609	0.41	0.41	0.403	0.429513	0.3101	0.5685	0.4251	0.4327	0.408	0.3	0.55	0.37	0.46	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.701551	NA	NA	NA	NA	NA	0.406	NA	3.6899
1283	15	98688071	98688071	T	C	intergenic	ARRDC4,FAM169B	dist=171003;dist=292320	NA	NA	ncRNA_intronic	ENSG00000259199	NA	NA	NA	NA	NA	15q26.3	NA	NA	NA	NA	rs8025763	0.2	0.2	0.195	0.194489	0.3101	0.1865	0.2046	0.0439	0.2802	0.32	0.15	0.23	0.06	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.116284	NA	NA	NA	NA	NA	0.29	NA	3.6899
1283	1	22329645	22329645	T	C	intronic	CELA3A	NA	NA	NA	intronic	ENSG00000142789	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs4543768	0.46	0.46	0.379	0.526757	0.3101	0.6389	0.5605	0.7005	0.3753	0.26	0.58	0.49	0.62	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.94208	NA	NA	NA	NA	NA	0.384	NA	3.6899
1283	3	49849723	49849723	G	A	intronic	UBA7	NA	NA	NA	intronic	ENSG00000182179	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs1799843	0.23	0.23	0.244	0.257987	0.3101	0.1498	0.2104	0.2632	0.3425	0.3	0.17	0.2	0.23	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.729985	3.729985	NA	NA	NA	NA	0.196	NA	3.6899
1283	3	126219388	126219388	C	T	intronic	UROC1	NA	NA	NA	intronic	ENSG00000159650	NA	NA	NA	NA	NA	3q21.3	NA	NA	NA	NA	rs62266268	0.2	0.2	0.213	0.216853	0.3101	0.005	0.2003	0.2602	0.2924	0.32	0.01	0.23	0.23	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.374254	NA	NA	NA	NA	NA	0.304	NA	3.6899
1283	10	81067040	81067040	C	T	intronic	ZMIZ1	NA	NA	NA	intronic	ENSG00000108175	NA	NA	NA	NA	NA	10q22.3	NA	NA	NA	NA	rs1250554	0.28	0.28	0.25	0.260583	0.3101	0.4147	0.2522	0.0159	0.3875	0.31	0.48	0.26	0.02	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.265504	NA	NA	NA	NA	NA	0.29	NA	3.6899
1283	14	23312718	23312718	C	T	intronic	MMP14	NA	NA	NA	intronic	ENSG00000157227	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs2236303	0.32	0.32	0.268	0.282748	0.3101	0.499	0.389	0.0628	0.2536	0.31	0.5	0.36	0.08	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.169336	NA	NA	NA	NA	NA	0.268	NA	3.6899
1283	22	18649922	18649922	A	G	intronic	USP18	NA	NA	NA	intronic	ENSG00000184979	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs9605536	0.35	0.35	0.331	0.361821	0.3101	0.1637	0.3184	0.6301	0.2873	0.33	0.16	0.31	0.63	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.359379	NA	NA	NA	NA	NA	0.478	NA	3.6899
1283	18	28728411	28728411	C	T	intronic	DSC1	NA	NA	NA	ncRNA_intronic	ENSG00000265888	NA	NA	NA	NA	NA	18q12.1	NA	NA	NA	NA	rs3213883	0.33	0.33	0.314	0.297125	0.2137	0.5675	0.3516	0.239	0.1442	0.2	0.58	0.32	0.25	0.2435	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.815802	NA	NA	0.186279	0.232864	ID=COSN165630;OCCURENCE=1(breast)	0.246	NA	3.6898543
1283	15	79217631	79217631	A	G	intronic	CTSH	NA	NA	NA	intronic	ENSG00000103811	NA	NA	NA	NA	NA	15q25.1	NA	NA	NA	NA	rs2289695	0.15	0.15	0.143	0.132188	0.1004	0.2817	0.1081	0.1036	0.0665	0.1	0.29	0.1	0.09	0.1132	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.19041	NA	NA	0.096553	0.097678	NA	0.145	NA	3.689847
1283	4	89018565	89018565	A	G	intronic	ABCG2	NA	NA	NA	intronic	ENSG00000118777	NA	NA	NA	NA	NA	4q22.1	NA	NA	Name=40	NA	rs2231157	0.32	0.32	0.306	0.309505	0.4394	0.3165	0.3501	0.0893	0.4376	0.44	0.35	0.36	0.1	0.4063	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.168619	NA	NA	0.464535	0.132093	NA	0.326	NA	3.689765
1283	2	140426628	140426628	A	G	intergenic	YY1P2,LRP1B	dist=769884;dist=562368	NA	NA	ncRNA_exonic	ENSG00000235232	NA	NA	NA	NA	NA	2q22.1	NA	NA	NA	NA	rs1837162	0.4	0.4	0.384	0.435703	0.3111	0.6954	0.5245	0.1528	0.6155	0.29	0.72	0.47	0.15	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.61587	NA	NA	NA	NA	NA	0.333	NA	3.6889
1283	3	159604214	159604214	T	C	intronic	IQCJ-SCHIP1,SCHIP1	NA	NA	NA	intronic	ENSG00000151967,ENSG00000250588	NA	NA	NA	NA	NA	3q25.33	NA	NA	NA	NA	rs33055	0.42	0.42	0.378	0.42492	0.3111	0.7401	0.4524	0.1399	0.5828	0.31	0.76	0.42	0.18	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.66732	NA	NA	NA	NA	NA	0.348	NA	3.6889
1283	5	101795556	101795556	G	A	intronic	SLCO6A1	NA	NA	NA	intronic	ENSG00000205359	NA	NA	NA	NA	NA	5q21.1	NA	NA	NA	NA	rs11749193	0.18	0.18	0.149	0.154553	0.3111	0.1478	0.1671	0.0204	0.1728	0.3	0.14	0.19	0.03	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.033966	NA	NA	NA	NA	NA	0.239	NA	3.6889
1283	5	138456994	138456994	G	A	intronic	SIL1	NA	NA	NA	intronic	ENSG00000120725	NA	NA	NA	NA	NA	5q31.2	NA	NA	NA	NA	rs11750382	0.21	0.21	0.192	0.207268	0.3111	0.1478	0.3098	0.0325	0.3252	0.32	0.14	0.31	0.04	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.480175	NA	NA	NA	NA	NA	0.181	NA	3.6889
1283	6	29769063	29769063	T	A	intergenic	LOC554223,HLA-G	dist=3479;dist=25693	NA	NA	ncRNA_exonic	ENSG00000261548	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs885937	0.36	0.36	0.365	0.384585	0.3111	0.1954	0.3703	0.5991	0.3753	0.31	0.24	0.36	0.57	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.150972	NA	NA	NA	NA	NA	0.399	NA	3.6889
1283	6	29769507	29769507	A	T	intergenic	LOC554223,HLA-G	dist=3923;dist=25249	NA	NA	ncRNA_exonic	ENSG00000261548	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs1632996	0.36	0.36	0.368	0.384585	0.3111	0.1954	0.3703	0.5991	0.3753	0.31	0.24	0.36	0.57	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.623817	NA	NA	NA	NA	NA	0.399	NA	3.6889
1283	7	5922056	5922056	T	C	intronic	OCM	NA	NA	NA	intronic	ENSG00000122543	NA	NA	NA	NA	NA	7p22.1	NA	NA	NA	NA	rs13236282	0.32	0.32	0.291	0.347244	0.3111	0.5317	0.2925	0.1891	0.4468	0.3	0.46	0.26	0.22	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.426082	NA	NA	NA	NA	NA	0.319	NA	3.6889
1283	18	9886567	9886567	T	G	intronic	TXNDC2	NA	NA	NA	UTR3	ENSG00000168454	ENST00000426718:c.*124T>G	NA	NA	NA	NA	18p11.22	NA	NA	NA	NA	rs62078799	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.478	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.5361	NA	NA	NA	NA	NA	NA	NA	3.6886667
1283	17	4937982	4937982	T	C	UTR5	SLC52A1	NM_001104577:c.-81A>G,NM_017986:c.-81A>G	NA	NA	UTR5	ENSG00000132517	ENST00000254853:c.-81A>G,ENST00000512825:c.-81A>G,ENST00000424747:c.-81A>G	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs346824	0.58	0.58	0.573	0.560104	0.6451	0.2361	0.6455	0.8366	0.3722	0.64	0.23	0.66	0.83	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.198117	NA	NA	NA	NA	NA	0.746	NA	3.6882334
1283	7	1197736	1197736	C	T	intronic	ZFAND2A	NA	NA	NA	intronic	ENSG00000178381	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs28685743	0.12	0.12	0.124	0.108427	0.1412	0.0278	0.1772	0.0847	0.1411	0.15	0.03	0.15	0.14	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.81977	NA	NA	0.170647	0.089595	NA	0.123	NA	3.688153
1283	6	109763040	109763040	G	C	intronic	SMPD2	NA	NA	NA	intronic	ENSG00000135587	NA	NA	NA	NA	NA	6q21	NA	NA	NA	NA	rs35969918	0.22	0.22	0.224	0.202676	0.3121	0.1617	0.196	0.1377	0.2249	0.3	0.2	0.22	0.14	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.090085	NA	NA	NA	NA	NA	0.188	NA	3.6879
1283	9	135412913	135412913	G	A	intronic	C9orf171	NA	NA	NA	intronic	ENSG00000188523	NA	NA	NA	NA	NA	9q34.13	NA	NA	NA	NA	rs13286286	0.29	0.29	0.262	0.262181	0.3121	0.2907	0.2622	0.2126	0.2485	0.32	0.31	0.3	0.23	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.777026	NA	NA	NA	NA	NA	0.261	NA	3.6879
1283	10	71264325	71264325	G	A	intronic	TSPAN15	NA	NA	NA	intronic	ENSG00000099282	NA	NA	NA	NA	NA	10q22.1	NA	NA	NA	NA	rs1652804	0.34	0.34	0.334	0.345447	0.3121	0.1567	0.3343	0.5477	0.3088	0.32	0.14	0.38	0.56	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.575925	NA	NA	NA	NA	NA	0.37	NA	3.6879
1283	16	72048632	72048632	A	G	intronic	DHODH	NA	NA	NA	intronic	ENSG00000102967	NA	NA	NA	NA	NA	16q22.2	NA	NA	NA	NA	rs8062895	0.4	0.4	0.342	0.373203	0.3121	0.6726	0.5389	0.1868	0.2618	0.31	0.66	0.49	0.19	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.673454	NA	NA	NA	NA	NA	0.254	NA	3.6879
1283	17	67513055	67513055	A	G	intronic	MAP2K6	NA	NA	NA	intronic	ENSG00000108984	NA	NA	NA	NA	NA	17q24.3	NA	Name=PU.1,BATF,YY1	NA	NA	rs2251855	0.43	0.43	0.416	0.428514	0.4374	0.4573	0.3703	0.4228	0.4387	0.44	0.44	0.37	0.44	0.4367	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.928288	NA	NA	0.438241	0.412165	NA	0.442	NA	3.687659
1283	8	27287997	27287997	T	A	intronic	PTK2B	NA	NA	NA	intronic	ENSG00000120899	NA	NA	NA	NA	NA	8p21.2	NA	NA	NA	NA	rs2241653	0.15	0.15	0.12	0.115815	0.171	0.1161	0.2118	0.0741	0.047	0.16	0.12	0.22	0.1	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.042879	NA	NA	0.14142	0.125	NA	0.138	NA	3.68758
1283	1	155838267	155838267	T	C	exonic	SYT11	NA	synonymous SNV	SYT11:NM_152280:exon2:c.T546C:p.H182H	exonic	ENSG00000132718	NA	synonymous SNV	ENSG00000132718:ENST00000368324:exon2:c.T546C:p.H182H	Score=533;Name=lod=196	NA	1q22	NA	NA	NA	NA	rs822521	0.94	0.94	0.941	0.93111	1	1	0.9856	0.7466	1	1	1	0.98	0.76	0.9799	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.599482	NA	NA	0.999302	0.78098	NA	0.971	NA	3.6874646
1283	2	17698678	17698678	A	G	exonic	RAD51AP2	NA	synonymous SNV	RAD51AP2:NM_001099218:exon1:c.T1005C:p.S335S	exonic	ENSG00000214842	NA	synonymous SNV	ENSG00000214842:ENST00000399080:exon1:c.T1005C:p.S335S	NA	NA	2p24.2	NA	NA	NA	NA	rs665312	0.6	0.6	0.57	0.598842	0.6491	0.8839	0.6585	0.1611	0.8027	0.64	0.87	0.65	0.2	0.672	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.062136	NA	NA	0.658456	0.290243	NA	0.514	NA	3.6871106
1283	1	149037624	149037624	T	C	intergenic	LOC645166,LOC388692	dist=84570;dist=241852	NA	NA	ncRNA_intronic	ENSG00000203825	NA	NA	NA	NA	NA	1q21.2	NA	NA	NA	NA	rs7533720	0.5	0.5	0.463	0.53774	0.3131	0.6131	0.4986	0.6589	0.5552	0.33	0.62	0.46	0.63	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.755029	NA	NA	NA	NA	NA	0.478	NA	3.6869
1283	2	220045035	220045035	G	A	intronic	FAM134A	NA	NA	NA	intronic	ENSG00000144567	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs7577690	0.24	0.24	0.206	0.217851	0.3131	0.2252	0.3429	0.0537	0.2454	0.3	0.23	0.32	0.07	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.635614	NA	NA	NA	NA	NA	0.181	NA	3.6869
1283	3	129695440	129695440	G	T	intronic	TRH	NA	NA	NA	intronic	ENSG00000170893	NA	NA	NA	NA	NA	3q22.1	NA	NA	NA	NA	rs13097335	0.24	0.24	0.241	0.248802	0.3131	0.247	0.1873	0.1415	0.3732	0.33	0.26	0.2	0.12	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.188922	NA	NA	NA	NA	NA	0.254	NA	3.6869
1283	8	125933493	125933493	T	A	intergenic	MTSS1,LOC157381	dist=192763;dist=20757	NA	NA	ncRNA_intronic	ENSG00000249816,ENSG00000250428	NA	NA	NA	NA	NA	8q24.13	NA	NA	NA	NA	rs11778786	0.2	0.2	0.171	0.185703	0.3131	0.1151	0.1873	0.0628	0.2924	0.33	0.11	0.25	0.07	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.40585	NA	NA	NA	NA	NA	0.13	NA	3.6869
1283	11	3943970	3943970	C	T	intronic	STIM1	NA	NA	NA	intronic	ENSG00000167323	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs7102215	0.23	0.23	0.195	0.254393	0.3131	0.3155	0.2723	0.0166	0.4397	0.32	0.29	0.24	0.02	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.484603	NA	NA	NA	NA	NA	0.232	NA	3.6869
1283	11	118221474	118221474	G	A	intronic	CD3G	NA	NA	NA	intronic	ENSG00000160654	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs1561966	0.38	0.38	0.353	0.404952	0.3131	0.5903	0.2248	0.3147	0.5583	0.32	0.6	0.29	0.27	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.469861	NA	NA	NA	NA	NA	0.37	NA	3.6869
1283	19	20634105	20634105	A	G	intergenic	ZNF826P,ZNF737	dist=26334;dist=86693	NA	NA	ncRNA_intronic	ENSG00000269043	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs12976072	0.16	0.16	0.135	0.120208	0.3131	0.001	0.1686	0.0129	0.1554	0.35	NA	0.18	0.02	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.654643	NA	NA	NA	NA	NA	0.283	NA	3.6869
1283	21	44107960	44107960	T	A	intronic	PDE9A	NA	NA	NA	intronic	ENSG00000160191	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs2839573	0.35	0.35	0.335	0.372005	0.3131	0.5427	0.2464	0.2496	0.5112	0.31	0.54	0.27	0.25	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.070895	NA	NA	NA	NA	NA	0.319	NA	3.6869
1283	15	79350840	79350840	A	G	intronic	RASGRF1	NA	NA	NA	intronic	ENSG00000058335	NA	NA	NA	NA	NA	15q25.1	NA	NA	NA	NA	rs3816282	0.11	0.11	0.097	0.136781	0.0835	0.2321	0.0418	0.0628	0.2607	0.09	0.21	0.04	0.06	0.1236	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.064369	NA	NA	0.106336	0.056694	NA	0.08	NA	3.686564
1283	7	95024046	95024046	A	G	intronic	PON3	NA	NA	NA	exonic	ENSG00000105852	NA	nonsynonymous SNV	ENSG00000105852:ENST00000418617:exon2:c.T77C:p.V26A,ENSG00000105852:ENST00000442770:exon2:c.T77C:p.V26A	NA	NA	7q21.3	NA	NA	NA	NA	rs11970910	0.6	0.6	0.588	0.620807	0.4901	0.7589	0.634	0.5756	0.6646	0.48	0.76	0.61	0.61	0.5439	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.495151	NA	NA	0.446395	0.514753	ID=COSN168149;OCCURENCE=1(large_intestine),2(endometrium)	0.565	NA	3.6862717
1283	4	17608620	17608620	A	G	intronic	LAP3	NA	NA	NA	ncRNA_intronic	ENSG00000249502	NA	NA	NA	NA	NA	4p15.32	NA	NA	NA	NA	rs4698628	0.68	0.68	0.649	0.610224	0.6471	0.8552	0.6988	0.4039	0.5358	0.66	0.87	0.68	0.47	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.515223	NA	NA	NA	NA	NA	0.688	NA	3.6862333
1283	11	33096982	33096982	C	G	upstream	LINC00294	NA	NA	NA	intronic	ENSG00000176148	NA	NA	NA	NA	NA	11p13	NA	NA	NA	NA	rs11032143	0.17	0.17	0.159	0.196086	0.1471	0.3383	0.0908	0.1051	0.2975	0.16	0.3	0.1	0.1	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.093694	NA	NA	NA	NA	NA	0.152	NA	3.6862333
1283	12	64749600	64749600	A	G	intronic	C12orf56	NA	NA	NA	ncRNA_exonic	ENSG00000238440	NA	NA	NA	NA	NA	12q14.2	NA	NA	NA	NA	rs6581553	0.5	0.5	0.462	0.457867	0.6471	0.374	0.6542	0.233	0.5143	0.65	0.43	0.65	0.23	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.803486	NA	NA	NA	NA	NA	0.558	NA	3.6862333
1283	3	62647942	62647942	T	A	intronic	CADPS	NA	NA	NA	intronic	ENSG00000163618	NA	NA	NA	NA	NA	3p14.2	NA	NA	NA	NA	rs13093807	0.07	0.07	0.082	0.0670927	0.1123	0.002	0.0504	0.0734	0.091	0.12	0.0035	0.06	0.08	0.092	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.250655	NA	NA	0.109535	0.078302	NA	0.029	NA	3.686165
1283	1	55197149	55197149	T	C	ncRNA_intronic	HEATR8-TTC4	NA	NA	NA	intronic	ENSG00000243725,ENSG00000271723	NA	NA	NA	NA	NA	1p32.3	NA	NA	NA	NA	rs3815226	0.28	0.28	0.22	0.255192	0.2018	0.5347	0.3559	0.0333	0.2505	0.2	0.54	0.32	0.05	0.2449	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.710533	NA	NA	0.200698	0.067635	NA	0.123	NA	3.6859353
1283	1	44594966	44594966	G	A	intronic	KLF17	NA	NA	NA	intronic	ENSG00000171872	NA	NA	NA	NA	NA	1p34.1	NA	NA	NA	NA	rs2485653	0.15	0.15	0.135	0.121605	0.3141	0.0179	0.1931	0.0204	0.1166	0.31	0.02	0.22	0.02	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.38933	NA	NA	NA	NA	NA	0.181	NA	3.6859
1283	1	47130873	47130873	A	G	intronic	ATPAF1	NA	NA	NA	intronic	ENSG00000123472,ENSG00000159658	NA	NA	NA	NA	NA	1p33	NA	NA	NA	NA	rs594118	0.55	0.55	0.536	0.547125	0.3141	0.7659	0.428	0.7511	0.3701	0.3	0.75	0.45	0.78	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.080499	NA	NA	NA	NA	NA	0.471	NA	3.6859
1283	6	31243615	31243615	G	A	intergenic	HLA-C,HLA-B	dist=3702;dist=78034	NA	NA	ncRNA_exonic	ENSG00000214892	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs13200569	0.33	0.33	0.331	0.326078	0.3141	0.3542	0.2666	0.3147	0.3671	0.33	0.35	0.23	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.037803	NA	NA	NA	NA	NA	0.261	NA	3.6859
1283	6	107621477	107621477	C	G	intronic	PDSS2	NA	NA	NA	intronic	ENSG00000164494	NA	NA	NA	NA	NA	6q21	NA	NA	NA	NA	rs2500595	0.19	0.19	0.174	0.148962	0.3141	0.0218	0.3026	0.0356	0.1544	0.31	0.03	0.35	0.07	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.820011	NA	NA	NA	NA	NA	0.29	NA	3.6859
1283	10	81060829	81060829	G	A	intronic	ZMIZ1	NA	NA	NA	intronic	ENSG00000108175	NA	NA	NA	NA	NA	10q22.3	NA	NA	NA	NA	rs1782648	0.36	0.36	0.348	0.360224	0.3141	0.4157	0.2925	0.3684	0.3875	0.31	0.48	0.29	0.34	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.815474	NA	NA	NA	NA	NA	0.333	NA	3.6859
1283	11	5729580	5729580	T	C	intronic	TRIM22	NA	NA	NA	intronic	ENSG00000132256,ENSG00000132274	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs2291845	0.16	0.16	0.14	0.139776	0.3141	0.0655	0.147	0.0197	0.1943	0.32	0.06	0.16	0.03	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.319852	NA	NA	NA	NA	NA	0.196	NA	3.6859
1283	11	27398845	27398845	G	A	intronic	LGR4	NA	NA	NA	intronic	ENSG00000205213	NA	NA	NA	NA	NA	11p14.1	NA	NA	NA	NA	rs10835171	0.41	0.41	0.405	0.417732	0.3141	0.501	0.4885	0.3911	0.4243	0.32	0.53	0.48	0.36	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.638099	NA	NA	NA	NA	NA	0.333	NA	3.6859
1283	16	84940062	84940062	A	C	intronic	CRISPLD2	NA	NA	NA	intronic	ENSG00000103196	NA	NA	NA	NA	NA	16q24.1	NA	NA	NA	NA	rs1874621	0.29	0.29	0.276	0.272963	0.3141	0.1071	0.3602	0.3888	0.183	0.33	0.13	0.35	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.002328	NA	NA	NA	NA	NA	0.203	NA	3.6859
1283	1	244747293	244747293	C	T	intronic	C1orf101	NA	NA	NA	intronic	ENSG00000179397	NA	NA	NA	NA	NA	1q44	NA	NA	NA	NA	rs6429488	0.2	0.2	0.212	0.261781	0.0755	0.372	0.2378	0.3979	0.1728	0.06	0.31	0.19	0.31	0.1595	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.281333	NA	NA	0.079255	0.30746	NA	NA	NA	3.685745
1283	3	113679725	113679725	C	T	UTR3	ZDHHC23	NM_173570:c.*145C>T	NA	NA	UTR3	ENSG00000184307	ENST00000330212:c.*145C>T,ENST00000498275:c.*145C>T	NA	NA	NA	NA	3q13.31	NA	NA	NA	NA	rs3732785	0.75	0.75	0.77	0.778155	0.6481	0.7569	0.7219	0.9266	0.773	0.66	0.74	0.72	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.512852	NA	NA	NA	NA	NA	0.862	NA	3.6852334
1283	16	4796595	4796595	T	C	intronic	C16orf71	NA	NA	NA	ncRNA_intronic	ENSG00000266994	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs759988	0.63	0.63	0.618	0.573682	0.6481	0.6786	0.5735	0.497	0.4928	0.65	0.71	0.57	0.54	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.921739	NA	NA	NA	NA	NA	0.594	NA	3.6852333
1284	1	15789446	15789446	C	G	intronic	CELA2A	NA	NA	NA	intronic	ENSG00000142615	NA	NA	NA	NA	NA	1p36.21	NA	NA	NA	NA	rs3815788	0.37	0.37	0.355	0.397364	0.3151	0.2321	0.3213	0.674	0.3323	0.3	0.23	0.35	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.320345	NA	NA	NA	NA	NA	0.413	NA	3.6849
1284	1	15789450	15789450	T	A	intronic	CELA2A	NA	NA	NA	intronic	ENSG00000142615	NA	NA	NA	NA	NA	1p36.21	NA	NA	NA	NA	rs3815789	0.38	0.38	0.391	0.409744	0.3151	0.2321	0.3242	0.7194	0.3323	0.3	0.23	0.35	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.143792	NA	NA	NA	NA	NA	0.435	NA	3.6849
1284	2	101675808	101675808	A	G	intronic	TBC1D8	NA	NA	NA	intronic	ENSG00000204634	NA	NA	NA	NA	NA	2q11.2	NA	NA	NA	NA	rs7572457	0.27	0.27	0.254	0.271366	0.3151	0.1597	0.3256	0.239	0.3466	0.32	0.17	0.35	0.25	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.493303	NA	NA	NA	NA	ID=COSN166226;OCCURENCE=1(NS)	0.261	NA	3.6849
1284	2	233281802	233281802	T	C	intergenic	ALPPL2,ALPI	dist=6378;dist=39031	NA	NA	ncRNA_intronic	ENSG00000204121	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs1878691	0.4	0.4	0.338	0.408946	0.3151	0.5903	0.4496	0.3056	0.4294	0.32	0.59	0.39	0.3	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.313426	NA	NA	NA	NA	NA	0.304	NA	3.6849
1284	3	108129348	108129348	T	C	intronic	MYH15	NA	NA	NA	intronic	ENSG00000144821	NA	NA	NA	NA	NA	3q13.13	NA	NA	NA	NA	rs1078455	0.19	0.19	0.186	0.18151	0.3151	0.0129	0.1974	0.1566	0.2403	0.33	NA	0.24	0.16	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.468909	NA	NA	NA	NA	NA	0.188	NA	3.6849
1284	10	73103904	73103904	C	G	intronic	SLC29A3	NA	NA	NA	intronic	ENSG00000198246	NA	NA	NA	NA	NA	10q22.1	NA	NA	NA	NA	rs41281300	0.2	0.2	0.173	0.1875	0.3151	0.0843	0.2161	0.1135	0.2423	0.3	0.08	0.27	0.15	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.323898	NA	NA	NA	NA	NA	0.239	NA	3.6849
1284	10	135179363	135179363	G	C	intronic	ECHS1	NA	NA	NA	intronic	ENSG00000127884	NA	NA	NA	NA	NA	10q26.3	NA	NA	NA	NA	rs56055735	0.32	0.32	0.302	0.316693	0.3151	0.3948	0.3718	0.2277	0.319	0.3	0.43	0.33	0.22	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.734102	NA	NA	NA	NA	NA	0.254	NA	3.6849
1284	17	12898454	12898454	C	A	intronic	ELAC2	NA	NA	NA	intronic	ENSG00000006744	NA	NA	NA	NA	NA	17p12	NA	NA	NA	NA	rs73981604	0.19	0.19	0.175	0.192692	0.3151	0.0327	0.2392	0.1573	0.2464	0.33	0.02	0.23	0.15	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.100856	NA	NA	NA	NA	NA	0.145	NA	3.6849
1284	17	12908204	12908204	T	C	intronic	ELAC2	NA	NA	NA	intronic	ENSG00000006744	NA	NA	NA	NA	NA	17p12	NA	NA	NA	NA	rs4792309	0.2	0.2	0.204	0.206669	0.3151	0.0347	0.2421	0.205	0.2495	0.33	0.03	0.23	0.18	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.32442	NA	NA	NA	NA	NA	0.196	NA	3.6849
1284	17	12914920	12914920	A	G	intronic	ELAC2	NA	NA	NA	intronic	ENSG00000006744	NA	NA	NA	NA	NA	17p12	NA	NA	NA	NA	rs41494747	0.21	0.21	0.199	0.214058	0.3151	0.0347	0.245	0.233	0.2474	0.33	0.03	0.23	0.21	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.692835	NA	NA	NA	NA	NA	0.188	NA	3.6849
1284	19	49558509	49558509	G	A	intronic	CGB7	NA	NA	NA	intronic	ENSG00000196337	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs36059036	0.25	0.25	0.205	0.259984	0.3151	0.2292	0.1801	0.2118	0.3569	0.3	0.22	0.2	0.25	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.751652	NA	NA	NA	NA	NA	0.13	NA	3.6849
1284	14	106135271	106135271	G	A	downstream	ELK2AP	NA	NA	NA	ncRNA_exonic	ENSG00000253755	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs34678053	0.22	0.22	0.202	0.197484	0.4821	0.0129	0.2896	0.0174	0.273	0.46	0.01	0.29	0.02	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.451215	NA	NA	NA	NA	NA	0.203	NA	3.6845666
1284	7	4213940	4213940	T	C	exonic	SDK1	NA	synonymous SNV	SDK1:NM_001079653:exon7:c.T348C:p.T116T,SDK1:NM_152744:exon33:c.T4887C:p.T1629T	exonic	ENSG00000146555	NA	synonymous SNV	ENSG00000146555:ENST00000389531:exon33:c.T4887C:p.T1629T,ENSG00000146555:ENST00000404826:exon33:c.T4887C:p.T1629T	NA	NA	7p22.2	NA	NA	NA	NA	rs671756	0.67	0.67	0.622	0.665735	0.6561	0.7659	0.6902	0.5764	0.6759	0.66	0.76	0.69	0.57	0.6817	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.989882	NA	NA	0.644302	0.607808	NA	0.623	NA	3.6845646
1284	2	20130145	20130145	T	G	intronic	WDR35	NA	NA	NA	intronic	ENSG00000118965	NA	NA	NA	NA	NA	2p24.1	NA	NA	NA	NA	rs28502265	0.13	0.13	0.117	0.142971	0.1123	0.1736	0.1239	0.093	0.2239	0.11	0.17	0.13	0.11	0.1148	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.540094	1.540094	NA	0.088372	0.104403	ID=COSN166030;OCCURENCE=1(breast)	0.109	NA	3.684528
1284	8	39777529	39777529	C	T	intronic	IDO1	NA	NA	NA	ncRNA_intronic	ENSG00000253939,ENSG00000254287	NA	NA	NA	NA	NA	8p11.21	NA	NA	NA	NA	rs7820268	0.26	0.26	0.248	0.22484	0.3221	0.2202	0.2133	0.2027	0.1677	0.31	0.21	0.25	0.25	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.333022	NA	NA	0.326717	0.220376	ID=COSN168315;OCCURENCE=1(large_intestine)	0.254	NA	3.6845163
1284	4	17844029	17844029	G	A	intronic	NCAPG	NA	NA	NA	intronic	ENSG00000109805	NA	NA	NA	NA	NA	4p15.31	NA	NA	Name=2	NA	rs17585261	0.62	0.62	0.609	0.6248	0.3996	0.7827	0.5418	0.7927	0.5256	0.41	0.79	0.53	0.82	0.4933	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.365432	NA	NA	0.422638	0.734453	NA	0.609	NA	3.684462
1284	2	98168055	98168055	T	C	intronic	ANKRD36B	NA	NA	NA	ncRNA_intronic	ENSG00000196912	NA	NA	NA	NA	NA	2q11.2	NA	NA	NA	NA	rs1972985	0.46	0.46	0.426	0.382788	0.6491	0.3036	0.438	0.3434	0.2045	0.63	0.34	0.48	0.34	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.618098	NA	NA	NA	NA	NA	0.587	NA	3.6842333
1284	2	98171807	98171807	T	C	intronic	ANKRD36B	NA	NA	NA	ncRNA_intronic	ENSG00000196912	NA	NA	NA	NA	NA	2q11.2	NA	NA	NA	NA	rs12712057	0.48	0.48	0.432	0.38099	0.6491	0.2986	0.4366	0.3427	0.2025	0.64	0.35	0.48	0.35	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.089958	NA	NA	NA	NA	NA	0.58	NA	3.6842333
1284	3	140122341	140122341	G	A	intronic	CLSTN2	NA	NA	NA	ncRNA_exonic	ENSG00000263959	NA	NA	NA	NA	NA	3q23	NA	NA	NA	NA	rs4683494	0.57	0.57	0.571	0.602436	0.6491	0.3353	0.6801	0.6309	0.7362	0.64	0.32	0.69	0.67	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.31642	NA	NA	NA	NA	NA	0.594	NA	3.6842333
1284	2	15614404	15614404	T	C	exonic	NBAS	NA	synonymous SNV	NBAS:NM_015909:exon15:c.A1386G:p.R462R	exonic	ENSG00000151779	NA	synonymous SNV	ENSG00000151779:ENST00000281513:exon15:c.A1386G:p.R462R,ENSG00000151779:ENST00000441750:exon15:c.A1386G:p.R462R	NA	NA	2p24.3	NA	NA	NA	NA	rs13014906	0.53	0.53	0.508	0.519369	0.6938	0.2232	0.6239	0.5492	0.5307	0.67	0.26	0.63	0.53	0.605	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.310511	NA	NA	0.683837	0.571039	NA	0.674	NA	3.6840296
1284	2	69300243	69300243	G	A	intronic	ANTXR1	NA	NA	NA	intronic	ENSG00000169604	NA	NA	NA	NA	NA	2p13.3	NA	NA	NA	NA	rs10202939	0.13	0.13	0.139	0.153155	0.1034	0.2282	0.0821	0.1732	0.1503	0.1	0.17	0.08	0.16	0.1148	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.122117	NA	NA	0.097791	0.154562	ID=COSM148874;OCCURENCE=1(stomach)	0.08	NA	3.684009
1284	2	135102742	135102742	A	G	intronic	MGAT5	NA	NA	NA	intronic	ENSG00000152127	NA	NA	NA	NA	NA	2q21.3	NA	NA	NA	NA	rs2290048	0.28	0.28	0.306	0.292532	0.3161	0.3105	0.1801	0.2587	0.3753	0.3	0.31	0.21	0.27	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.014561	NA	NA	NA	NA	NA	0.37	NA	3.6839
1284	3	46730749	46730749	A	G	intronic	ALS2CL	NA	NA	NA	intronic	ENSG00000178038	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs4076927	0.42	0.42	0.413	0.458866	0.3161	0.3046	0.4006	0.7746	0.3793	0.31	0.28	0.41	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.647616	NA	NA	NA	NA	NA	0.507	NA	3.6839
1284	7	55628707	55628707	C	T	intronic	VOPP1	NA	NA	NA	intronic	ENSG00000154978	NA	NA	NA	NA	NA	7p11.2	NA	NA	NA	NA	rs7807352	0.34	0.34	0.305	0.339457	0.3161	0.5367	0.5418	0.0756	0.3732	0.34	0.52	0.47	0.06	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.314713	NA	NA	NA	NA	NA	0.297	NA	3.6839
1284	7	126935809	126935809	C	G	intergenic	GRM8,ZNF800	dist=43381;dist=74545	NA	NA	ncRNA_exonic	ENSG00000236105	NA	NA	NA	NA	NA	7q31.33	NA	NA	NA	NA	rs885991	0.32	0.32	0.335	0.323682	0.3161	0.0893	0.2478	0.6051	0.2464	0.32	0.12	0.24	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.826428	NA	NA	NA	NA	NA	0.297	NA	3.6839
1284	7	142836440	142836440	A	G	intronic	PIP	NA	NA	NA	intronic	ENSG00000159763	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs6959713	0.32	0.32	0.334	0.346446	0.3161	0.0476	0.2637	0.6959	0.272	0.31	0.04	0.29	0.68	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.871041	NA	NA	NA	NA	NA	0.312	NA	3.6839
1284	8	104709594	104709594	A	G	intronic	RIMS2	NA	NA	NA	intronic	ENSG00000176406	NA	NA	NA	NA	NA	8q22.3	NA	NA	NA	NA	rs1176674	0.47	0.47	0.439	0.489018	0.3161	0.7589	0.5821	0.4433	0.3845	0.3	0.74	0.53	0.39	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.248097	NA	NA	NA	NA	NA	0.5	NA	3.6839
1284	19	21143930	21143930	G	A	intergenic	ZNF85,ZNF430	dist=10427;dist=59496	NA	NA	ncRNA_exonic	ENSG00000269012	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs12463337	0.28	0.28	0.236	0.234425	0.3161	0.4454	0.2205	0.0121	0.2434	0.33	0.45	0.25	0.02	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.17117	NA	NA	NA	NA	NA	0.188	NA	3.6839
1284	3	48463618	48463618	T	A	intronic	PLXNB1	NA	NA	NA	intronic	ENSG00000164050	NA	NA	NA	NA	NA	3p21.31	NA	NA	Name=4	NA	rs9883759	0.34	0.34	0.352	0.319688	0.4642	0.3135	0.2882	0.2398	0.3078	0.45	0.29	0.3	0.24	0.3825	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.770076	NA	NA	0.469419	0.279165	NA	0.435	NA	3.683881
1284	10	114171599	114171599	T	C	intronic	ACSL5	NA	NA	NA	intronic	ENSG00000197142	NA	NA	NA	NA	NA	10q25.2	NA	NA	NA	NA	rs876873	0.12	0.12	0.122	0.140974	0.1481	0.0109	0.121	0.267	0.1115	0.13	0.01	0.12	0.25	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.537393	NA	NA	0.168133	0.234827	NA	0.101	NA	3.683767
1284	7	133868439	133868439	G	A	intronic	LRGUK	NA	NA	NA	intronic	ENSG00000155530	NA	NA	NA	NA	NA	7q33	NA	NA	NA	NA	rs55857809	0.17	0.17	0.139	0.16893	0.0736	0.3839	0.353	0.0068	0.1339	0.06	0.38	0.28	0.02	0.1455	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.269739	NA	NA	0.097209	0.026101	NA	0.094	NA	3.683691
1284	12	56495306	56495306	C	T	intronic	ERBB3	NA	NA	NA	intronic	ENSG00000065361,ENSG00000257411	NA	NA	NA	NA	NA	12q13.2	NA	NA	NA	NA	rs812826	0.08	0.08	0.076	0.0888578	0.1123	0.002	0.0735	0.1596	0.0695	0.11	0.0017	0.08	0.14	0.0975	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00662	NA	NA	0.106628	0.151611	NA	0.138	NA	3.683572
1284	6	24852751	24852751	C	A	intronic	FAM65B	NA	NA	NA	intronic	ENSG00000111913	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs9467333	0.19	0.19	0.181	0.190495	0.1521	0.2331	0.1974	0.1551	0.229	0.16	0.25	0.17	0.17	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.248111	NA	NA	0.164362	0.151012	NA	0.123	NA	3.683538
1284	15	28478799	28478799	G	A	intronic	HERC2	NA	NA	NA	intronic	ENSG00000128731	NA	NA	NA	NA	NA	15q13.1	NA	NA	NA	NA	rs72714147	0.16	0.16	0.143	0.159744	0.1083	0.2907	0.2334	0.0408	0.1861	0.1	0.31	0.23	0.03	0.1247	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.196153	NA	NA	0.083721	0.058783	NA	0.116	NA	3.683279
1284	19	43422100	43422100	C	G	upstream	PSG6	NA	NA	NA	intronic	ENSG00000170848	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs58309502	0.12	0.12	0.08	0.110024	0.1501	0.003	0.2233	0.0893	0.1268	0.16	0.0017	0.22	0.12	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.1727	NA	NA	NA	NA	NA	0.174	NA	3.6832333
1284	20	61441061	61441061	G	A	intronic	OGFR	NA	NA	NA	intronic	ENSG00000060491	NA	NA	NA	NA	NA	20q13.33	NA	NA	NA	NA	rs45585738	0.12	0.12	NA	0.125399	0.1799	0.005	0.098	0.1823	0.136	0.18	0.0017	0.1	0.17	0.137	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.010386	NA	NA	NA	NA	NA	0.13	NA	3.6831
1284	1	79387242	79387242	C	T	intronic	ELTD1	NA	NA	NA	intronic	ENSG00000162618	NA	NA	NA	NA	NA	1p31.1	NA	NA	NA	NA	rs3811440	0.22	0.22	0.245	0.194289	0.3171	0.2312	0.1945	0.0658	0.2035	0.32	0.21	0.22	0.07	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.114978	NA	NA	NA	NA	NA	0.188	NA	3.6829
1284	2	233282847	233282847	C	G	intergenic	ALPPL2,ALPI	dist=7423;dist=37986	NA	NA	ncRNA_exonic	ENSG00000204121	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs13002718	0.43	0.43	0.393	0.452476	0.3171	0.5903	0.4582	0.4644	0.4294	0.32	0.59	0.41	0.43	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.261214	NA	NA	NA	NA	NA	0.362	NA	3.6829
1284	7	103155944	103155944	C	G	intronic	RELN	NA	NA	NA	intronic	ENSG00000189056	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs2528862	NA	NA	0.53	0.582069	0.3171	0.5913	0.3602	0.8949	0.5798	NA	NA	NA	NA	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.041358	NA	NA	NA	NA	NA	0.543	NA	3.6829
1284	9	15055921	15055921	C	G	intergenic	LOC389705,TTC39B	dist=36199;dist=114921	NA	NA	ncRNA_exonic	ENSG00000234297	NA	NA	NA	NA	NA	9p22.3	NA	NA	NA	NA	rs7022876	0.38	0.38	0.391	0.377596	0.3171	0.2173	0.3876	0.6286	0.2587	0.32	0.22	0.39	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.752515	NA	NA	NA	NA	NA	0.464	NA	3.6829
1284	11	61548874	61548874	G	A	intronic	MYRF	NA	NA	NA	intronic	ENSG00000124920	NA	NA	NA	NA	NA	11q12.2	NA	NA	NA	NA	rs174532	0.14	0.14	0.128	0.10024	0.3171	0.001	0.1787	0.0166	0.0368	0.29	0.0017	0.19	0.02	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.078266	NA	NA	NA	NA	NA	0.138	NA	3.6829
1284	12	14689449	14689449	T	G	intronic	PLBD1	NA	NA	NA	intronic	ENSG00000121316	NA	NA	NA	NA	NA	12p13.1	NA	NA	NA	NA	rs35754761	0.24	0.24	0.24	0.189696	0.3171	0.2153	0.3429	0.0726	0.0818	0.31	0.24	0.32	0.08	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.550317	NA	NA	NA	NA	NA	0.196	NA	3.6829
1284	12	51585601	51585601	C	T	intronic	POU6F1	NA	NA	NA	intronic	ENSG00000184271	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs10747606	0.35	0.35	0.329	0.347444	0.3171	0.2609	0.3559	0.4365	0.3415	0.32	0.28	0.39	0.46	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.040548	NA	NA	NA	NA	NA	NA	NA	3.6829
1284	14	23312863	23312863	C	G	intronic	MMP14	NA	NA	NA	intronic	ENSG00000157227	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs2236304	0.32	0.32	0.282	0.288938	0.3171	0.4881	0.3977	0.0855	0.2526	0.32	0.48	0.37	0.1	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.56107	1.56107	NA	NA	NA	NA	0.275	NA	3.6829
1284	19	45856144	45856144	G	A	intronic	ERCC2	NA	NA	NA	intronic	ENSG00000104884	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs1799787	0.18	0.18	0.186	0.18151	0.3171	0.0774	0.1729	0.0719	0.3037	0.33	0.09	0.17	0.08	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.368674	NA	NA	NA	NA	NA	0.181	NA	3.6829
1284	10	12148259	12148259	A	C	exonic	DHTKD1	NA	synonymous SNV	DHTKD1:NM_018706:exon11:c.A1911C:p.P637P	exonic	ENSG00000181192	NA	synonymous SNV	ENSG00000181192:ENST00000263035:exon11:c.A1911C:p.P637P	NA	NA	10p14	Score=915;Name=V$MEIS1_01	NA	NA	NA	rs1701472	0.95	0.95	0.941	0.954073	0.999	1	0.9899	0.8321	1	1	1	0.99	0.8	0.9858	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.026137	NA	NA	0.99907	0.852701	NA	0.906	NA	3.6827966
1284	10	96826922	96826922	C	G	intronic	CYP2C8	NA	NA	NA	intronic	ENSG00000138115	NA	NA	NA	NA	NA	10q23.33	NA	NA	NA	NA	rs11572082	0.06	0.06	0.048	0.0457268	0.1183	0.001	0.0994	0.0083	0.0297	0.11	0.0035	0.13	0.01	0.0826	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.000637	NA	NA	0.116512	0.024512	NA	0.094	NA	3.682588
1284	6	90371202	90371202	G	A	exonic	MDN1	NA	synonymous SNV	MDN1:NM_014611:exon88:c.C14661T:p.L4887L	exonic	ENSG00000112159	NA	synonymous SNV	ENSG00000112159:ENST00000369393:exon88:c.C14661T:p.L4887L,ENSG00000112159:ENST00000428876:exon88:c.C14661T:p.L4887L	NA	NA	6q15	NA	NA	NA	NA	rs9444701	0.76	0.76	0.743	0.725439	0.6501	0.9167	0.7824	0.7163	0.5777	0.66	0.93	0.77	0.71	0.6829	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.684	NA	NA	0.651279	0.712438	NA	0.681	NA	3.6823876
1284	2	68352515	68352515	A	C	intergenic	C1D,WDR92	dist=62356;dist=4766	NA	NA	ncRNA_exonic	ENSG00000236259	NA	NA	NA	Score=621;Name=lod=444	NA	2p14	NA	NA	NA	NA	rs6742154	0.42	0.42	0.396	0.439696	0.4344	0.498	0.4352	0.2368	0.6626	0.45	0.49	0.48	0.26	0.4693	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.841815	NA	0.02	0.414114	0.304795	NA	0.246	NA	3.682186
1284	3	113858350	113858350	C	T	exonic	DRD3	NA	synonymous SNV	DRD3:NM_000796:exon5:c.G720A:p.Q240Q,DRD3:NM_033663:exon5:c.G720A:p.Q240Q	exonic	ENSG00000151577	NA	synonymous SNV	ENSG00000151577:ENST00000295881:exon5:c.G720A:p.Q240Q,ENSG00000151577:ENST00000383673:exon5:c.G720A:p.Q240Q,ENSG00000151577:ENST00000460779:exon6:c.G720A:p.Q240Q,ENSG00000151577:ENST00000467632:exon6:c.G720A:p.Q240Q	Score=333;Name=lod=30	NA	3q13.31	NA	NA	NA	NA	rs2251177	0.96	0.96	0.959	0.957867	1	1	0.987	0.8707	0.9683	1	1	0.99	0.85	0.9848	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.514585	NA	NA	0.999767	0.874489	NA	0.935	NA	3.6820996
1284	19	32035891	32035891	C	T	intergenic	TSHZ3,THEG5	dist=195701;dist=47296	NA	NA	ncRNA_intronic	ENSG00000267407	NA	NA	NA	NA	NA	19q12	NA	NA	NA	NA	rs10164395	0.19	0.19	0.177	0.195487	0.3181	0.0982	0.2118	0.1248	0.2536	0.3	0.04	0.24	0.14	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.880839	NA	NA	NA	NA	NA	0.283	NA	3.6819
1284	1	22303702	22303702	C	A	intronic	CELA3B	NA	NA	NA	intronic	ENSG00000219073	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs4415533	0.43	0.43	0.377	0.438698	0.3181	0.6101	0.5288	0.4115	0.3589	0.34	0.56	0.5	0.39	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0729	NA	NA	NA	NA	NA	0.362	NA	3.6819
1284	1	22846452	22846452	C	G	intronic	ZBTB40	NA	NA	NA	intronic	ENSG00000184677	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs7551801	0.4	0.4	0.381	0.359225	0.3181	0.3562	0.5043	0.4039	0.2413	0.32	0.42	0.5	0.42	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.11697	NA	NA	NA	NA	NA	0.333	NA	3.6819
1284	4	173269915	173269915	C	T	intronic	GALNTL6	NA	NA	NA	intronic	ENSG00000174473	NA	NA	NA	NA	NA	4q34.1	NA	NA	NA	NA	rs333398	0.41	0.41	0.421	0.411741	0.3181	0.5387	0.3112	0.5439	0.2699	0.32	0.53	0.29	0.52	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.142057	NA	NA	NA	NA	NA	0.304	NA	3.6819
1284	6	31107317	31107317	C	T	intronic	PSORS1C1	NA	NA	NA	intronic	ENSG00000204540	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs1265092	0.26	0.26	0.24	0.249401	0.3181	0.1052	0.2867	0.2322	0.3241	0.33	0.13	0.3	0.25	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.479569	1.479569	NA	NA	NA	NA	0.275	NA	3.6819
1284	12	6965740	6965740	C	A	intronic	USP5	NA	NA	NA	intronic	ENSG00000111667	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs2238114	0.5	0.5	0.502	0.502396	0.3181	0.505	0.3847	0.848	0.3057	0.32	0.47	0.43	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.517253	NA	NA	NA	NA	NA	0.471	NA	3.6819
1284	12	51585304	51585304	T	C	intronic	POU6F1	NA	NA	NA	intronic	ENSG00000184271	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs7487157	0.39	0.39	0.389	0.403754	0.3181	0.2569	0.3746	0.6407	0.3436	0.31	0.27	0.41	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.633429	NA	NA	NA	NA	NA	0.37	NA	3.6819
1284	17	7701204	7701204	A	G	intronic	DNAH2	NA	NA	NA	intronic	ENSG00000183914	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs8072174	0.2	0.2	0.179	0.163538	0.3181	0.001	0.2133	0.18	0.1145	0.32	0.0017	0.27	0.17	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.132301	NA	NA	NA	NA	NA	0.203	NA	3.6819
1284	17	7701806	7701806	C	T	intronic	DNAH2	NA	NA	NA	intronic	ENSG00000183914	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs2131810	0.19	0.19	0.172	0.161142	0.3181	0.001	0.2118	0.1717	0.1145	0.32	0.0017	0.26	0.17	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.022251	NA	NA	NA	NA	NA	0.203	NA	3.6819
1284	17	12899726	12899726	A	G	intronic	ELAC2	NA	NA	NA	intronic	ENSG00000006744	NA	NA	NA	NA	NA	17p12	NA	NA	NA	NA	rs4792308	0.2	0.2	0.194	0.208866	0.3181	0.0357	0.2478	0.2042	0.2536	0.33	0.03	0.25	0.18	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.337596	NA	NA	NA	NA	NA	0.188	NA	3.6819
1284	14	74991855	74991855	A	G	exonic	LTBP2	NA	synonymous SNV	LTBP2:NM_000428:exon15:c.T2502C:p.T834T	exonic	ENSG00000119681	NA	synonymous SNV	ENSG00000119681:ENST00000261978:exon15:c.T2502C:p.T834T,ENSG00000119681:ENST00000553939:exon15:c.T2502C:p.T834T,ENSG00000119681:ENST00000556690:exon15:c.T2502C:p.T834T	NA	NA	14q24.3	NA	NA	NA	NA	rs862031	0.71	0.71	0.713	0.728235	0.6471	0.7361	0.6744	0.8298	0.7045	0.64	0.77	0.66	0.79	0.6737	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.150434	NA	NA	0.664186	0.810713	NA	0.732	NA	3.6816806
1284	6	32151222	32151222	G	A	intronic	AGER	NA	NA	NA	UTR3	ENSG00000204308	ENST00000427134:c.*53G>A	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs1035798	0.18	0.18	0.152	0.14996	0.2485	0.1389	0.2839	0.0129	0.1503	0.23	0.17	0.29	0.02	0.237	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.754197	NA	NA	NA	NA	NA	0.239	NA	3.6811667
1284	4	70223738	70223738	A	G	intergenic	UGT2B28,UGT2B4	dist=62970;dist=122145	NA	NA	ncRNA_exonic	ENSG00000250612	NA	NA	NA	NA	NA	4q13.2	NA	NA	NA	NA	rs10018610	0.34	0.34	0.358	0.330471	0.3191	0.4494	0.3156	0.2927	0.2812	0.31	0.46	0.31	0.27	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.250604	NA	NA	NA	NA	NA	0.348	NA	3.6809
1284	6	152542234	152542234	G	T	intronic	SYNE1	NA	NA	NA	intronic	ENSG00000131018	NA	NA	NA	NA	NA	6q25.2	NA	NA	NA	NA	rs9397492	0.38	0.38	0.359	0.389377	0.3191	0.5486	0.4135	0.2231	0.5051	0.33	0.57	0.41	0.23	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.049726	NA	NA	NA	NA	NA	0.326	NA	3.6809
1284	8	113267709	113267709	A	G	intronic	CSMD3	NA	NA	NA	intronic	ENSG00000164796	NA	NA	NA	NA	NA	8q23.3	NA	NA	NA	NA	rs7006723	0.41	0.41	0.444	0.423922	0.3191	0.4157	0.245	0.7216	0.2648	0.3	0.35	0.28	0.73	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.443357	1.443357	NA	NA	NA	NA	0.514	NA	3.6809
1284	10	21076307	21076307	C	T	intronic	NEBL	NA	NA	NA	intronic	ENSG00000078114	NA	NA	NA	NA	NA	10p12.31	NA	NA	NA	NA	rs2296607	0.28	0.28	0.261	0.299521	0.3191	0.4544	0.2147	0.0862	0.4683	0.31	0.41	0.26	0.09	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.638085	NA	NA	NA	NA	NA	0.268	NA	3.6809
1284	12	9229629	9229629	C	T	intronic	A2M	NA	NA	NA	intronic	ENSG00000175899	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs1805654	0.31	0.31	0.307	0.305911	0.3191	0.0823	0.3991	0.5204	0.1667	0.33	0.07	0.4	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.041664	NA	NA	NA	NA	NA	0.42	NA	3.6809
1284	12	114384952	114384952	C	T	intronic	RBM19	NA	NA	NA	intronic	ENSG00000122965	NA	NA	NA	NA	NA	12q24.21	NA	NA	NA	NA	rs3782460	0.23	0.23	0.234	0.236422	0.3191	0.1657	0.2594	0.1392	0.3395	0.31	0.14	0.3	0.17	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.210509	NA	NA	NA	NA	NA	0.188	NA	3.6809
1284	13	113783990	113783990	C	T	intronic	F10	NA	NA	NA	intronic	ENSG00000126218	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs3211736	0.27	0.27	0.246	0.273762	0.3191	0.3502	0.2262	0.1505	0.3487	0.31	0.33	0.26	0.13	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.657362	NA	NA	NA	NA	NA	0.21	NA	3.6809
1284	1	179316687	179316687	A	G	intronic	SOAT1	NA	NA	NA	intronic	ENSG00000057252	NA	NA	NA	NA	NA	1q25.2	NA	NA	NA	NA	rs13306729	0.11	0.11	0.113	0.096845	0.1103	0.1042	0.0634	0.152	0.0245	0.11	0.08	0.07	0.16	0.0948	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.234031	1.234031	NA	0.114096	0.145322	NA	0.152	NA	3.680804
1284	4	3184229	3184229	A	G	intronic	HTT	NA	NA	NA	intronic	ENSG00000197386	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs363094	0.14	0.14	0.152	0.154752	0.1004	0.0089	0.1009	0.3737	0.1033	0.1	0.0017	0.1	0.37	0.1117	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.283026	NA	NA	0.107117	0.296668	NA	0.152	NA	3.680783
1284	1	111857120	111857120	C	A	intronic	CHIA	NA	NA	NA	intronic	ENSG00000134216	NA	NA	NA	NA	NA	1p13.2	NA	NA	NA	NA	rs3818820	0.11	0.11	0.105	0.129593	0.0984	0.0933	0.0807	0.1936	0.1472	0.08	0.09	0.09	0.17	0.1132	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.085931	NA	NA	0.107738	0.162575	NA	0.167	NA	3.680662
1284	3	113955265	113955265	G	A	exonic	ZNF80	NA	synonymous SNV	ZNF80:NM_007136:exon1:c.C657T:p.C219C	exonic	ENSG00000174255	NA	synonymous SNV	ENSG00000174255:ENST00000308095:exon1:c.C657T:p.C219C,ENSG00000174255:ENST00000482457:exon1:c.C657T:p.C219C	NA	NA	3q13.31	NA	NA	NA	NA	rs6438190	0.68	0.68	0.689	0.693091	0.6849	0.5427	0.6009	0.8502	0.7096	0.68	0.57	0.59	0.86	0.6566	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.078346	NA	NA	0.644535	0.798684	NA	0.768	NA	3.6806316
1284	14	24647902	24647902	C	T	intronic	REC8	NA	NA	NA	intronic	ENSG00000100918	NA	NA	NA	NA	NA	14q12	NA	NA	NA	NA	rs34136797	0.15	0.15	0.117	0.163738	0.0895	0.1091	0.3112	0.2133	0.1247	0.09	0.14	0.25	0.18	0.1348	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.439431	NA	NA	0.095576	0.17823	ID=COSN164645;OCCURENCE=1(breast)	0.138	NA	3.680124
1284	5	128301824	128301824	T	A	UTR5	SLC27A6	NM_014031:c.-7T>A,NM_001017372:c.-7T>A	NA	NA	UTR5	ENSG00000113396	ENST00000262462:c.-7T>A,ENST00000395266:c.-7T>A,ENST00000506176:c.-7T>A	NA	NA	NA	NA	5q23.3	NA	NA	NA	NA	rs2526246	0.23	0.23	NA	0.194888	0.3608	0.0565	0.2464	0.146	0.1963	0.36	0.06	0.31	0.17	0.2925	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.653278	NA	NA	NA	NA	NA	0.138	NA	3.6800334
1284	17	43517054	43517054	G	A	intronic	PLEKHM1	NA	NA	NA	intronic	ENSG00000225190	NA	NA	NA	NA	NA	17q21.31	NA	NA	NA	NA	rs62064657	0.1	0.1	0.085	0.072484	0.1938	0.001	0.1527	0.0098	0.0491	0.18	0.0017	0.19	0.01	0.1262	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.831509	NA	NA	NA	NA	NA	0.094	NA	3.68
1284	9	139819984	139819984	C	T	intronic	TRAF2	NA	NA	NA	intronic	ENSG00000127191	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs12554888	0.32	0.32	0.317	0.292133	0.3201	0.4643	0.2622	0.208	0.2209	0.31	0.5	0.26	0.18	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.27883	NA	NA	NA	NA	NA	0.246	NA	3.6799
1284	15	100871329	100871329	G	A	intronic	ADAMTS17	NA	NA	NA	intronic	ENSG00000140470	NA	NA	NA	NA	NA	15q26.3	NA	NA	NA	NA	rs11639041	0.19	0.19	0.166	0.230032	0.3201	0.121	0.2032	0.084	0.4663	0.3	0.11	0.22	0.1	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.25571	NA	NA	NA	NA	NA	0.239	NA	3.6799
1284	18	34298732	34298732	G	C	intronic	FHOD3	NA	NA	NA	intronic	ENSG00000134775	NA	NA	NA	NA	NA	18q12.2	NA	NA	NA	NA	rs7240383	0.35	0.35	0.348	0.395367	0.3201	0.3254	0.4697	0.4115	0.4703	0.31	0.33	0.43	0.38	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.432963	NA	NA	NA	NA	NA	0.399	NA	3.6799
1284	19	49558498	49558498	T	C	intronic	CGB7	NA	NA	NA	intronic	ENSG00000196337	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs34140832	0.24	0.24	0.195	0.266174	0.3201	0.2331	0.183	0.2163	0.3712	0.29	0.21	0.21	0.22	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.358512	NA	NA	NA	NA	NA	0.138	NA	3.6799
1284	5	10282396	10282396	A	G	exonic	CMBL	NA	synonymous SNV	CMBL:NM_138809:exon5:c.T471C:p.I157I	exonic	ENSG00000164237	NA	synonymous SNV	ENSG00000164237:ENST00000296658:exon5:c.T471C:p.I157I	NA	NA	5p15.2	NA	NA	NA	NA	rs10067744	0.45	0.45	0.443	0.429912	0.7197	0.0754	0.4366	0.4811	0.4233	0.73	0.06	0.51	0.43	0.5655	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.556746	NA	NA	0.702209	0.497049	ID=COSM149793;OCCURENCE=1(stomach)	0.587	NA	3.6792576
1284	2	33525407	33525407	A	G	intronic	LTBP1	NA	NA	NA	intronic	ENSG00000049323	NA	NA	NA	NA	NA	2p22.3	NA	NA	NA	NA	rs2123769	0.21	0.21	0.2	0.176717	0.3211	0.2381	0.1945	0.0166	0.1687	0.33	0.21	0.19	0.03	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.044052	NA	NA	NA	NA	NA	0.188	NA	3.6789
1284	3	38812650	38812650	G	A	intronic	SCN10A	NA	NA	NA	intronic	ENSG00000185313	NA	NA	NA	NA	NA	3p22.2	NA	NA	NA	NA	rs10212338	0.24	0.24	0.217	0.22484	0.3211	0.1607	0.3343	0.1165	0.2607	0.33	0.15	0.35	0.11	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.446692	NA	NA	NA	NA	NA	0.239	NA	3.6789
1284	9	27610743	27610743	C	T	intergenic	C9orf72,LINGO2	dist=36879;dist=337341	NA	NA	ncRNA_exonic	ENSG00000215441	NA	NA	NA	NA	NA	9p21.2	NA	NA	NA	NA	rs1832055	0.25	0.25	0.232	0.249002	0.3211	0.1558	0.3718	0.1339	0.3395	0.33	0.15	0.35	0.16	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.195021	NA	NA	NA	NA	NA	0.283	NA	3.6789
1284	19	7507038	7507038	T	C	intronic	ARHGEF18	NA	NA	NA	intronic	ENSG00000104880,ENSG00000268861	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs146992149	0.22	0.22	0.161	0.342252	0.3211	0.4097	0.4035	0.2118	0.4274	0.19	0.27	0.24	0.19	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.172001	NA	NA	NA	NA	NA	NA	NA	3.6789
1284	2	17902381	17902381	C	G	intronic	SMC6	NA	NA	NA	intronic	ENSG00000163029	NA	NA	NA	NA	NA	2p24.2	NA	NA	NA	NA	rs11897477	0.13	0.13	0.133	0.130192	0.1083	0.0337	0.1153	0.2496	0.1012	0.12	0.03	0.12	0.27	0.1081	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.614774	NA	NA	0.104767	0.237965	NA	0.101	NA	3.678833
1284	1	167815514	167815514	G	A	intronic	ADCY10	NA	NA	NA	intronic	ENSG00000143199	NA	NA	NA	NA	NA	1q24.2	NA	NA	NA	NA	rs35398078	0.06	0.06	0.055	0.0509185	0.1133	0.001	0.0937	0.0219	0.047	0.11	NA	0.1	0.04	0.0878	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.66466	1.66466	NA	0.120349	0.043577	NA	0.036	NA	3.678551
1284	2	202154397	202154397	C	G	intronic	ALS2CR12	NA	NA	NA	intronic	ENSG00000155749	NA	NA	NA	NA	NA	2q33.1	NA	NA	NA	NA	rs6715284	0.13	0.13	0.133	0.193291	0.1024	0.0129	0.098	0.4304	0.2198	0.11	0.0035	0.09	0.34	0.1263	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.20803	NA	NA	0.092791	0.387653	NA	0.196	NA	3.678509
1284	11	67564197	67564197	T	C	ncRNA_exonic	FAM86C2P	NA	NA	NA	ncRNA_exonic	ENSG00000160172	NA	NA	NA	NA	NA	11q13.2	NA	Name=ERalpha_a	NA	NA	rs7129832	0.99	0.99	0.995	0.990615	0.997	1	0.9942	0.9841	0.9806	1	1	0.99	0.98	0.9913	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.510061	NA	NA	NA	NA	NA	0.21	NA	3.6783666
1284	5	180686958	180686958	C	T	intronic	TRIM52	NA	NA	NA	ncRNA_intronic	ENSG00000233937	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs943957	0.17	0.17	0.175	0.192292	0.2256	0.0665	0.1859	0.2814	0.1718	0.21	0.03	0.18	0.27	0.204	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.425702	NA	NA	0.225581	0.264185	NA	0.174	NA	3.6781523
1284	5	98115828	98115828	A	G	intronic	RGMB	NA	NA	NA	intronic	ENSG00000174136	NA	NA	NA	NA	NA	5q15	NA	NA	NA	NA	rs2302983	0.11	0.11	0.103	0.126198	0.0895	0.1647	0.1066	0.0613	0.226	0.08	0.18	0.14	0.05	0.1286	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.754374	NA	NA	0.103907	0.059354	NA	0.072	NA	3.677993
1284	2	97026576	97026576	C	T	intronic	NCAPH	NA	NA	NA	intronic	ENSG00000121152	NA	NA	NA	NA	NA	2q11.2	NA	NA	NA	NA	rs62153915	0.28	0.28	0.29	0.370807	0.3221	0.2331	0.317	0.2784	0.726	0.32	0.22	0.31	0.26	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.888933	NA	NA	NA	NA	NA	0.232	NA	3.6779
1284	4	167020324	167020324	C	T	intronic	TLL1	NA	NA	NA	intronic	ENSG00000038295	NA	NA	NA	NA	NA	4q32.3	NA	NA	NA	NA	rs10018177	0.25	0.25	0.254	0.271565	0.3221	0.0694	0.3876	0.2519	0.3722	0.32	0.07	0.4	0.24	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.718124	NA	NA	NA	NA	NA	0.203	NA	3.6779
1284	19	20988637	20988637	G	A	intergenic	ZNF626,ZNF85	dist=144235;dist=117422	NA	NA	exonic	ENSG00000160229	NA	synonymous SNV	ENSG00000160229:ENST00000344519:exon4:c.G231A:p.L77L,ENSG00000160229:ENST00000425625:exon4:c.G369A:p.L123L	NA	NA	19p12	NA	NA	NA	NA	rs6511163	0.38	0.38	0.335	0.352835	0.4085	0.4345	0.3761	0.2126	0.3845	0.43	0.44	0.4	0.22	0.4136	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.818166	NA	NA	NA	NA	NA	0.246	NA	3.6779
1284	20	30382108	30382108	T	G	intronic	TPX2	NA	NA	NA	intronic	ENSG00000088325	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs6060952	0.36	0.36	0.397	0.346645	0.3221	0.0139	0.2608	0.8548	0.089	0.33	0.01	0.3	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.978147	NA	NA	NA	NA	NA	0.399	NA	3.6779
1284	10	5139815	5139815	C	A	UTR3	AKR1C3	NM_001253909:c.*25C>A	NA	NA	intronic	ENSG00000196139	NA	NA	NA	NA	NA	10p15.1	NA	NA	NA	NA	rs2245191	0.25	0.25	0.223	0.232827	0.2594	0.1944	0.1873	0.289	0.2014	0.26	0.19	0.22	0.32	0.2294	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.502849	NA	NA	NA	NA	NA	0.246	NA	3.6778667
1284	6	32548646	32548646	G	T	intronic	HLA-DRB1	NA	NA	NA	intronic	ENSG00000196126	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs3830123	0.08	0.08	0.052	0.0646965	0.1282	0.0208	0.1052	0.0575	0.0256	0.12	0.03	0.12	0.06	0.0862	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.858455	NA	NA	0.107973	0.070814	NA	0.094	NA	3.677627
1284	1	55518316	55518316	C	T	intronic	PCSK9	NA	NA	NA	intronic	ENSG00000169174	NA	NA	NA	NA	NA	1p32.3	NA	NA	NA	NA	rs2483205	0.38	0.38	0.392	0.394169	0.4503	0.1964	0.3242	0.5053	0.4397	0.47	0.21	0.35	0.45	0.4276	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.835086	NA	NA	0.444651	0.484567	NA	0.536	CLINSIG=non-pathogenic;CLNDBN=Familial_hypercholesterolemia;CLNREVSTAT=single;CLNACC=RCV000030351.1;CLNDSDB=MedGen:OMIM:OMIM:SNOMED_CT:SNOMED_CT;CLNDSDBID=C0020445:143890:144400:397915002:398036000	3.677449
1284	13	39420663	39420663	T	C	intronic	FREM2	NA	NA	NA	intronic	ENSG00000150893	NA	NA	NA	NA	NA	13q13.3	NA	NA	NA	NA	rs9548502	0.09	0.09	0.076	0.109625	0.0895	0.001	0.2522	0.1445	0.0941	0.07	0.0017	0.2	0.12	0.1245	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.128108	NA	NA	0.108953	0.141625	NA	0.087	NA	3.677047
1284	16	56864618	56864618	C	T	intronic	NUP93	NA	NA	NA	intronic	ENSG00000102900	NA	NA	NA	NA	NA	16q13	NA	NA	Name=31	NA	rs4461062	0.52	0.52	0.53	0.547524	0.4046	0.6736	0.4942	0.5598	0.5859	0.39	0.7	0.5	0.56	0.4807	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.36181	NA	NA	0.437791	0.550273	NA	0.486	NA	3.676909
1284	1	228444297	228444297	T	G	intronic	OBSCN	NA	NA	NA	intronic	ENSG00000154358	NA	NA	NA	NA	NA	1q42.13	NA	NA	NA	NA	rs7532141	0.19	0.19	0.141	0.159744	0.3231	0.0575	0.2651	0.062	0.1544	0.33	0.06	0.29	0.05	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.474885	NA	NA	NA	NA	NA	0.225	NA	3.6769
1284	2	101652732	101652732	C	T	intronic	TBC1D8	NA	NA	NA	intronic	ENSG00000204634	NA	NA	NA	NA	NA	2q11.2	NA	NA	NA	NA	rs4850957	0.22	0.22	0.201	0.223243	0.3231	0.1488	0.3084	0.0522	0.3681	0.32	0.16	0.35	0.06	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.795565	NA	NA	NA	NA	NA	0.174	NA	3.6769
1284	11	49860463	49860463	C	T	intergenic	LOC440040,OR4C13	dist=28494;dist=113480	NA	NA	ncRNA_exonic	ENSG00000219061	NA	NA	NA	NA	NA	11p11.12	NA	NA	NA	NA	rs10769621	0.33	0.33	0.355	0.314297	0.3231	0.2808	0.2176	0.4493	0.226	0.33	0.28	0.23	0.48	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.881649	NA	0.03	NA	NA	NA	0.399	NA	3.6769
1284	12	15704425	15704425	G	T	intronic	PTPRO	NA	NA	NA	intronic	ENSG00000151490	NA	NA	NA	NA	NA	12p12.3	NA	NA	NA	NA	rs1012674	0.26	0.26	0.247	0.284744	0.3231	0.2272	0.2565	0.2708	0.3436	0.31	0.19	0.28	0.25	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.637086	NA	NA	NA	NA	NA	0.261	NA	3.6769
1284	16	56771791	56771791	T	C	intronic	NUP93	NA	NA	NA	intronic	ENSG00000102900	NA	NA	NA	NA	NA	16q13	NA	NA	NA	NA	rs62036970	0.23	0.23	0.225	0.221246	0.3231	0.1022	0.232	0.2322	0.2168	0.32	0.1	0.25	0.22	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.516228	NA	NA	NA	NA	NA	0.275	NA	3.6769
1284	19	19616026	19616026	T	C	intronic	GATAD2A	NA	NA	NA	intronic	ENSG00000167491	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs3752151	0.41	0.41	0.394	0.458067	0.3231	0.3006	0.4769	0.6437	0.4949	0.32	0.29	0.46	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.856761	NA	NA	NA	NA	NA	0.478	NA	3.6769
1284	4	56830605	56830605	A	G	intronic	CEP135	NA	NA	NA	intronic	ENSG00000174799	NA	NA	NA	NA	NA	4q12	NA	NA	NA	NA	rs62308567	0.06	0.06	0.054	0.0407348	0.1223	NA	0.0648	0.0076	0.0266	0.13	NA	0.06	0.01	0.0883	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.470806	NA	NA	0.113488	0.020436	NA	0.036	NA	3.675912
1284	4	20541008	20541008	C	A	intronic	SLIT2	NA	NA	NA	intronic	ENSG00000145147	NA	NA	NA	NA	NA	4p15.31	NA	NA	NA	NA	rs3842004	NA	NA	NA	0.249401	0.3241	0.2113	0.2161	0.236	0.2536	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.616036	3.616036	NA	NA	NA	NA	NA	NA	3.6759
1284	7	111400501	111400501	T	A	intronic	DOCK4	NA	NA	NA	intronic	ENSG00000128512	NA	NA	NA	NA	NA	7q31.1	NA	NA	NA	NA	rs17158794	0.28	0.28	0.277	0.281949	0.3241	0.0347	0.2478	0.4902	0.2362	0.33	0.04	0.3	0.46	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.372499	NA	NA	NA	NA	NA	0.384	NA	3.6759
1284	19	55119365	55119365	A	G	intergenic	LILRA1,LILRB1	dist=5678;dist=9264	NA	NA	ncRNA_exonic	ENSG00000238094	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs12979839	0.45	0.45	0.42	0.430711	0.3241	0.5952	0.5014	0.4531	0.2904	0.32	0.59	0.48	0.46	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.094006	NA	NA	NA	NA	NA	0.529	NA	3.6759
1284	9	139312972	139312972	G	T	intronic	PMPCA	NA	NA	NA	intronic	ENSG00000165688	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs11145967	0.07	0.07	0.059	0.0702875	0.1024	0.0179	0.183	0.0174	0.0828	0.1	0.02	0.14	0.02	0.1043	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.666616	NA	NA	0.117442	0.031548	NA	0.065	NA	3.675858
1284	2	211341156	211341156	C	G	intronic	LANCL1	NA	NA	NA	UTR5	ENSG00000115365	ENST00000443314:c.-36G>C	NA	NA	NA	NA	2q34	NA	Name=Ini1,TCF4	NA	NA	rs2287418	0.46	0.46	0.426	0.48103	0.4871	0.629	0.5519	0.2103	0.638	0.48	0.6	0.55	0.2	0.5065	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.19611	3.19611	NA	0.497442	0.267363	NA	0.355	NA	3.6756247
1284	13	31036681	31036681	A	G	exonic	HMGB1	NA	synonymous SNV	HMGB1:NM_002128:exon4:c.T465C:p.Y155Y	exonic	ENSG00000189403	NA	synonymous SNV	ENSG00000189403:ENST00000399489:exon3:c.T465C:p.Y155Y,ENSG00000189403:ENST00000326004:exon4:c.T465C:p.Y155Y,ENSG00000189403:ENST00000339872:exon4:c.T465C:p.Y155Y,ENSG00000189403:ENST00000341423:exon4:c.T465C:p.Y155Y,ENSG00000189403:ENST00000399494:exon4:c.T465C:p.Y155Y,ENSG00000189403:ENST00000405805:exon4:c.T465C:p.Y155Y	Score=650;Name=lod=582	NA	13q12.3	NA	NA	NA	NA	rs1929606	0.97	0.97	0.968	0.972045	1	1	0.9942	0.8971	1	1	1	1	0.89	0.9913	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.012884	NA	NA	0.999767	0.911257	NA	0.971	NA	3.6755996
1284	1	244747150	244747150	G	A	intronic	C1orf101	NA	NA	NA	intronic	ENSG00000179397	NA	NA	NA	NA	NA	1q44	NA	NA	NA	NA	rs6429487	0.24	0.24	0.213	0.25639	0.0755	0.372	0.2378	0.3797	0.1697	0.07	0.36	0.23	0.36	0.1608	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.387323	NA	NA	0.088256	0.327281	NA	0.232	NA	3.675444
1284	14	21837879	21837879	C	G	intronic	SUPT16H	NA	NA	NA	intronic	ENSG00000092201	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs17197100	0.05	0.05	0.055	0.0463259	0.1203	NA	0.0389	0.0106	0.0716	0.12	NA	0.04	0.01	0.085	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.019287	NA	NA	0.119419	0.030186	NA	0.094	NA	3.675281
1284	11	7794650	7794650	G	C	intergenic	OVCH2,OR5P2	dist=66709;dist=22871	NA	NA	ncRNA_exonic	ENSG00000166408	NA	NA	NA	Score=399;Name=lod=56	NA	11p15.4	NA	NA	NA	NA	rs371799	0.51	0.51	0.457	0.470447	0.6998	0.4821	0.6671	0.0635	0.6329	0.71	0.49	0.66	0.08	0.6251	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.341225	2.341225	NA	NA	NA	NA	0.486	NA	3.6751
1285	1	36926445	36926445	C	T	intronic	MRPS15	NA	NA	NA	intronic	ENSG00000116898	NA	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	rs3738839	0.31	0.31	0.302	0.278554	0.325	0.3155	0.4568	0.1619	0.2239	0.33	0.37	0.4	0.16	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.555304	NA	NA	NA	NA	NA	0.21	NA	3.675
1285	1	97189288	97189288	T	A	intronic	PTBP2	NA	NA	NA	intronic	ENSG00000117569	NA	NA	NA	NA	NA	1p21.3	NA	NA	NA	NA	rs3762410	0.32	0.32	0.276	0.334065	0.325	0.4266	0.3991	0.118	0.4939	0.31	0.44	0.41	0.12	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.318368	1.318368	NA	NA	NA	NA	0.188	NA	3.675
1285	1	160151421	160151421	G	C	intronic	ATP1A4	NA	NA	NA	intronic	ENSG00000132681	NA	NA	NA	NA	NA	1q23.2	NA	NA	NA	NA	rs11265350	0.35	0.35	0.329	0.310304	0.325	0.6409	0.2723	0.0983	0.2679	0.33	0.62	0.3	0.1	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.254257	NA	NA	NA	NA	NA	0.37	NA	3.675
1285	2	148674797	148674797	G	C	intronic	ACVR2A	NA	NA	NA	intronic	ENSG00000121989	NA	NA	NA	NA	NA	2q22.3	NA	NA	NA	NA	rs3764955	0.32	0.32	0.28	0.273762	0.325	0.4246	0.3674	0.0809	0.2597	0.34	0.43	0.38	0.1	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.220824	NA	NA	NA	NA	NA	0.391	NA	3.675
1285	16	90094214	90094214	C	T	intronic	GAS8	NA	NA	NA	intronic	ENSG00000141013	NA	NA	NA	NA	NA	16q24.3	NA	NA	NA	NA	rs3743826	0.23	0.23	0.194	0.243011	0.325	0.1677	0.2723	0.0651	0.456	0.32	0.18	0.28	0.09	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.293116	NA	NA	NA	NA	NA	0.196	NA	3.675
1285	13	50495555	50495555	T	C	intronic	SPRYD7	NA	NA	NA	intronic	ENSG00000123178	NA	NA	NA	NA	NA	13q14.2	NA	NA	NA	NA	rs9568357	0.27	0.27	0.232	0.327077	0.1074	0.6766	0.2435	0.2209	0.3957	0.11	0.6	0.2	0.2	0.2179	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.023232	NA	NA	NA	NA	NA	0.203	NA	3.6747
1285	22	45927220	45927220	C	G	intronic	FBLN1	NA	NA	NA	intronic	ENSG00000077942	NA	NA	NA	NA	NA	22q13.31	NA	NA	NA	NA	rs6006768	0.16	0.16	0.145	0.178714	0.0984	0.0972	0.1787	0.3018	0.1789	0.11	0.1	0.16	0.3	0.1261	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.79575	NA	NA	0.10093	0.268498	ID=COSN166784;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.275	NA	3.67457
1285	19	3198755	3198755	C	T	intronic	NCLN	NA	NA	NA	intronic	ENSG00000125912	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs2304247	0.14	0.14	0.129	0.125399	0.163	0.1736	0.121	0.0227	0.1789	0.16	0.2	0.14	0.02	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.305565	NA	NA	0.162476	0.038295	NA	0.072	NA	3.674524
1285	20	20243558	20243558	A	G	intronic	C20orf26	NA	NA	NA	ncRNA_intronic	ENSG00000243810	NA	NA	NA	NA	NA	20p11.23	NA	NA	NA	NA	rs34200155	0.17	0.17	0.165	0.189896	0.2087	0.0248	0.2334	0.264	0.2096	0.21	0.02	0.22	0.26	0.2136	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.127859	NA	NA	0.236744	0.251475	NA	0.261	NA	3.6742893
1285	2	187500682	187500682	A	G	intronic	ITGAV	NA	NA	NA	intronic	ENSG00000138448	NA	NA	NA	NA	NA	2q32.1	NA	NA	NA	NA	rs3795865	0.21	0.21	0.191	0.221246	0.326	0.0774	0.2378	0.1596	0.3333	0.32	0.08	0.28	0.16	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.393552	NA	NA	NA	NA	NA	0.304	NA	3.674
1285	2	233759695	233759695	G	C	intronic	NGEF	NA	NA	NA	intronic	ENSG00000066248	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs938569	0.33	0.33	0.322	0.28734	0.326	0.3462	0.3934	0.2337	0.184	0.33	0.38	0.37	0.24	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.6442	NA	NA	NA	NA	NA	0.181	NA	3.674
1285	4	1165587	1165587	C	G	intronic	SPON2	NA	NA	NA	intronic	ENSG00000159674	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs2242279	0.22	0.22	0.225	0.199481	0.326	0.2659	0.1931	0.0113	0.2597	0.32	0.26	0.19	0.02	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.27605	NA	NA	NA	NA	NA	0.065	NA	3.674
1285	4	155461687	155461687	A	C	intronic	PLRG1	NA	NA	NA	intronic	ENSG00000171566	NA	NA	NA	NA	NA	4q31.3	NA	NA	NA	NA	rs62330410	0.23	0.23	0.246	0.26238	0.326	0.1438	0.1931	0.267	0.362	0.3	0.13	0.21	0.25	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.530178	NA	NA	NA	NA	NA	0.239	NA	3.674
1285	4	155465535	155465535	A	G	intronic	PLRG1	NA	NA	NA	intronic	ENSG00000171566	NA	NA	NA	NA	NA	4q31.3	NA	NA	NA	NA	rs62330413	0.23	0.23	0.222	0.255591	0.326	0.1438	0.1945	0.2436	0.3579	0.3	0.13	0.21	0.23	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.722351	NA	NA	NA	NA	NA	0.239	NA	3.674
1285	12	6883700	6883700	C	T	intronic	LAG3	NA	NA	NA	intronic	ENSG00000089692	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs2365095	0.37	0.37	0.381	0.388778	0.326	0.38	0.3689	0.5204	0.2986	0.32	0.36	0.35	0.49	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.077231	NA	NA	NA	NA	NA	0.246	NA	3.674
1285	17	69617574	69617574	A	G	intergenic	KCNJ2,SOX9	dist=1441391;dist=499587	NA	NA	ncRNA_exonic	ENSG00000228118	NA	NA	NA	NA	NA	17q24.3	NA	NA	NA	NA	rs7223081	0.45	0.45	0.436	0.46885	0.326	0.5139	0.4265	0.5734	0.4581	0.33	0.51	0.41	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.308274	NA	NA	NA	NA	NA	0.399	NA	3.674
1285	19	40148102	40148102	G	A	intronic	LGALS16	NA	NA	NA	intronic	ENSG00000249861	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs7245574	0.32	0.32	0.281	0.309105	0.326	0.3562	0.5548	0.1089	0.3395	0.33	0.38	0.48	0.13	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.239111	NA	NA	NA	NA	NA	0.261	NA	3.674
1285	19	50316083	50316083	C	T	intronic	FUZ	NA	NA	NA	intronic	ENSG00000010361	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs35816883	0.2	0.2	0.163	0.217252	0.326	0.0972	0.2147	0.1074	0.3793	0.32	0.08	0.25	0.1	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.058397	NA	NA	NA	NA	NA	0.145	NA	3.674
1285	1	244723920	244723920	C	G	intronic	C1orf101	NA	NA	NA	intronic	ENSG00000179397	NA	NA	NA	NA	NA	1q44	NA	NA	NA	NA	rs7522899	0.25	0.25	0.243	0.273562	0.0775	0.376	0.2464	0.4334	0.1728	0.07	0.36	0.23	0.43	0.1658	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.719407	NA	NA	0.082791	0.363822	NA	0.239	NA	3.673909
1285	12	101723239	101723239	T	C	intronic	UTP20	NA	NA	NA	intronic	ENSG00000120800	NA	NA	NA	NA	NA	12q23.2	NA	NA	NA	NA	rs35512001	0.05	0.05	0.05	0.0435304	0.1143	0.003	0.0504	0.0083	0.0552	0.11	0.0035	0.06	0.01	0.0888	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.018903	NA	NA	0.123488	0.028824	NA	0.036	NA	3.673412
1285	1	228434467	228434467	T	C	exonic	OBSCN	NA	synonymous SNV	OBSCN:NM_001098623:exon13:c.T3996C:p.A1332A,OBSCN:NM_052843:exon13:c.T3996C:p.A1332A,OBSCN:NM_001271223:exon14:c.T4272C:p.A1424A	exonic	ENSG00000154358	NA	synonymous SNV	ENSG00000154358:ENST00000284548:exon13:c.T3996C:p.A1332A,ENSG00000154358:ENST00000422127:exon13:c.T3996C:p.A1332A,ENSG00000154358:ENST00000570156:exon14:c.T4272C:p.A1424A	NA	NA	1q42.13	NA	NA	NA	NA	rs7517108	0.67	0.67	0.627	0.66254	0.6421	0.6151	0.6902	0.848	0.4622	0.63	0.6	0.69	0.81	0.6689	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.571096	NA	NA	0.682384	0.827595	NA	0.652	NA	3.6732826
1285	1	27720178	27720178	T	C	intronic	GPR3	NA	NA	NA	intronic	ENSG00000181773	NA	NA	NA	NA	NA	1p36.11	NA	NA	NA	NA	rs2504786	0.46	0.46	0.497	0.498602	0.327	0.4603	0.2277	0.885	0.3845	0.33	0.42	0.22	0.87	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.248041	NA	NA	NA	NA	NA	0.42	NA	3.673
1285	1	89798802	89798802	A	G	intergenic	LOC729930,GBP6	dist=42757;dist=30634	NA	NA	ncRNA_intronic	ENSG00000233235	NA	NA	NA	NA	NA	1p22.2	NA	NA	NA	NA	rs4658131	0.29	0.29	0.268	0.291334	0.327	0.1339	0.438	0.348	0.2362	0.3	0.15	0.39	0.37	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.118429	NA	NA	NA	NA	NA	0.21	NA	3.673
1285	1	160147510	160147510	G	A	intronic	ATP1A4	NA	NA	NA	intronic	ENSG00000132681	NA	NA	NA	NA	NA	1q23.2	NA	NA	NA	NA	rs731853	0.33	0.33	0.296	0.290535	0.327	0.62	0.2709	0.0371	0.2699	0.33	0.61	0.3	0.04	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.27208	NA	NA	NA	NA	NA	0.348	NA	3.673
1285	2	160637267	160637267	C	A	intronic	CD302,LY75-CD302	NA	NA	NA	intronic	ENSG00000054219,ENSG00000241399,ENSG00000248672	NA	NA	NA	NA	NA	2q24.2	NA	NA	NA	NA	rs2303552	0.27	0.27	0.246	0.21885	0.327	0.2698	0.487	0.0287	0.1217	0.33	0.29	0.44	0.03	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.202578	NA	NA	NA	NA	NA	0.341	NA	3.673
1285	6	31609813	31609813	C	T	intronic	BAG6	NA	NA	NA	intronic	ENSG00000204463	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs755714	0.28	0.28	0.26	0.248802	0.327	0.3492	0.3401	0.0174	0.3129	0.31	0.39	0.37	0.02	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.223236	NA	NA	NA	NA	NA	0.341	NA	3.673
1285	8	20007100	20007100	C	T	intronic	SLC18A1	NA	NA	NA	intronic	ENSG00000036565	NA	NA	NA	NA	NA	8p21.3	NA	NA	NA	NA	rs145489006	NA	NA	NA	0.360224	0.327	0.4077	0.3141	0.388	0.3405	NA	NA	NA	NA	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.051328	NA	NA	NA	NA	NA	0.022	NA	3.673
1285	8	26868167	26868167	A	G	intergenic	ADRA1A,STMN4	dist=145245;dist=225647	NA	NA	downstream	ENSG00000215288	NA	NA	NA	Score=610;Name=lod=401	NA	8p21.2	NA	NA	NA	NA	rs6557972	0.89	0.89	0.864	0.878195	0.827	0.9335	0.902	0.9463	0.7648	0.82	0.94	0.9	0.95	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.107357	NA	NA	NA	NA	NA	0.891	NA	3.673
1285	16	90104019	90104019	G	A	intronic	GAS8	NA	NA	NA	intronic	ENSG00000141013	NA	NA	NA	NA	NA	16q24.3	NA	NA	NA	NA	rs2241036	0.33	0.33	0.328	0.363618	0.327	0.1577	0.317	0.5136	0.4438	0.32	0.18	0.32	0.52	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.923671	NA	NA	NA	NA	NA	0.312	NA	3.673
1285	20	18724990	18724990	G	A	intronic	DTD1	NA	NA	NA	intronic	ENSG00000125821	NA	NA	NA	NA	NA	20p11.23	NA	NA	NA	NA	rs3827973	0.28	0.28	0.255	0.293331	0.327	0.4097	0.2349	0.1127	0.4243	0.33	0.35	0.21	0.16	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.743174	NA	NA	NA	NA	NA	0.188	NA	3.673
1285	2	238269871	238269871	C	G	intronic	COL6A3	NA	NA	NA	intronic	ENSG00000163359	NA	NA	NA	NA	NA	2q37.3	NA	NA	NA	NA	rs2645769	0.2	0.2	0.217	0.222045	0.174	0.1012	0.1542	0.4054	0.1963	0.16	0.08	0.19	0.4	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.040737	NA	NA	0.153363	0.374277	ID=COSN166440;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.239	NA	3.672637
1285	X	301454	301454	G	A	intronic	PPP2R3B	NA	NA	NA	intronic	ENSG00000167393	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs73178007	0.28	0.28	NA	NA	NA	NA	NA	NA	NA	0.28	0.34	0.19	0.29	0.0586	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.563652	NA	NA	0.268862	0.290293	NA	NA	NA	3.672538
1285	16	72093134	72093134	C	A	intronic	HP	NA	NA	NA	UTR3	ENSG00000257017	ENST00000569639:c.*36C>A,ENST00000576168:c.*36C>A	NA	NA	NA	NA	16q22.2	NA	NA	NA	NA	rs3852780	0.09	0.09	0.057	0.086262	0.173	0.0218	0.0663	0.0121	0.1779	0.18	0.02	0.08	0.02	0.1476	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.175543	NA	NA	0.17372	0.046202	NA	NA	NA	3.6723467
1285	2	170411693	170411693	T	C	exonic	FASTKD1	NA	synonymous SNV	FASTKD1:NM_024622:exon7:c.A1155G:p.L385L	exonic	ENSG00000138399	NA	synonymous SNV	ENSG00000138399:ENST00000453153:exon7:c.A1155G:p.L385L,ENSG00000138399:ENST00000453929:exon7:c.A1155G:p.L385L	NA	NA	2q31.1	NA	NA	NA	NA	rs2683455	0.71	0.71	0.676	0.679513	0.6779	0.755	0.7522	0.6876	0.5409	0.68	0.74	0.73	0.69	0.6636	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.160441	NA	NA	0.653023	0.677647	NA	0.645	NA	3.6721436
1285	18	7043455	7043455	C	A	intronic	LAMA1	NA	NA	NA	intronic	ENSG00000101680	NA	NA	NA	NA	NA	18p11.31	NA	NA	NA	NA	rs11663956	0.06	0.06	0.04	0.0371406	0.1252	NA	0.0504	0.0038	0.0204	0.13	NA	0.06	0.0041	0.0852	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.231403	NA	NA	0.117497	0.024285	NA	0.058	NA	3.672103
1285	1	160146173	160146173	T	C	intronic	ATP1A4	NA	NA	NA	intronic	ENSG00000132681	NA	NA	NA	NA	NA	1q23.2	NA	NA	NA	NA	rs881291	0.34	0.34	0.302	0.296326	0.328	0.624	0.2723	0.0499	0.2761	0.33	0.62	0.3	0.05	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.331475	NA	NA	NA	NA	ID=COSN163291;OCCURENCE=1(breast)	0.348	NA	3.672
1285	1	204210750	204210750	C	A	intronic	PLEKHA6	NA	NA	NA	intronic	ENSG00000143850	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs4412655	0.36	0.36	0.343	0.327676	0.328	0.4762	0.4467	0.1846	0.2832	0.33	0.48	0.44	0.2	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.760048	NA	NA	NA	NA	NA	0.304	NA	3.672
1285	2	210874246	210874246	T	C	intronic	RPE	NA	NA	NA	intronic	ENSG00000197713	NA	NA	NA	NA	NA	2q34	NA	NA	NA	NA	rs3738934	0.24	0.24	0.238	0.222244	0.328	0.2113	0.2738	0.0772	0.2843	0.33	0.21	0.31	0.11	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.98745	3.98745	NA	NA	NA	NA	0.239	NA	3.672
1285	3	101383321	101383321	T	C	intronic	ZBTB11	NA	NA	NA	intronic	ENSG00000066422	NA	NA	NA	NA	NA	3q12.3	NA	NA	NA	NA	rs13081846	0.29	0.29	0.297	0.27516	0.328	0.2917	0.2925	0.2632	0.2076	0.32	0.31	0.26	0.23	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.196353	NA	NA	NA	NA	NA	0.217	NA	3.672
1285	8	26441562	26441562	A	G	intronic	DPYSL2	NA	NA	NA	intronic	ENSG00000092964	NA	NA	NA	NA	NA	8p21.2	NA	NA	NA	NA	rs408753	0.39	0.39	0.413	0.439297	0.328	0.251	0.3271	0.6475	0.546	0.33	0.27	0.33	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.913512	NA	NA	NA	NA	NA	0.493	NA	3.672
1285	11	15009233	15009233	A	T	intergenic	CALCA,CALCB	dist=15401;dist=85913	NA	NA	ncRNA_exonic	ENSG00000250640	NA	NA	NA	NA	NA	11p15.2	NA	NA	NA	NA	rs7358380	0.28	0.28	0.252	0.266973	0.328	0.1379	0.4697	0.2118	0.2679	0.32	0.16	0.45	0.22	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.29467	NA	NA	NA	NA	NA	0.326	NA	3.672
1285	11	111715570	111715570	G	C	intronic	ALG9	NA	NA	NA	intronic	ENSG00000086848,ENSG00000258529	NA	NA	NA	NA	NA	11q23.1	NA	NA	NA	NA	rs1346180	0.27	0.27	0.259	0.243411	0.328	0.1915	0.3228	0.1952	0.2188	0.32	0.18	0.36	0.23	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.274774	NA	NA	NA	NA	NA	0.312	NA	3.672
1285	13	111134780	111134780	G	A	intronic	COL4A2	NA	NA	NA	intronic	ENSG00000134871	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs3803229	0.29	0.29	0.262	0.28115	0.328	0.3552	0.4078	0.1067	0.3027	0.32	0.37	0.38	0.09	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.549189	NA	NA	NA	NA	NA	0.246	NA	3.672
1285	15	59497437	59497437	G	C	intronic	MYO1E	NA	NA	NA	intronic	ENSG00000157483	NA	NA	NA	NA	NA	15q22.2	NA	NA	NA	NA	rs2414623	0.45	0.45	0.427	0.496206	0.328	0.6101	0.4784	0.444	0.635	0.33	0.63	0.42	0.44	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.537829	NA	NA	NA	NA	NA	0.341	NA	3.672
1285	17	56290334	56290334	T	C	intronic	MKS1	NA	NA	NA	intronic	ENSG00000011143	NA	NA	NA	NA	NA	17q22	NA	NA	NA	NA	rs3826300	0.45	0.45	0.487	0.480831	0.4404	0.2212	0.3026	0.854	0.4121	0.44	0.19	0.32	0.85	0.4466	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.768081	NA	NA	0.441429	0.788657	NA	0.493	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000114214.2;CLNDSDB=.;CLNDSDBID=.	3.671571
1285	13	52971893	52971893	G	A	exonic	THSD1	NA	synonymous SNV	THSD1:NM_018676:exon3:c.C495T:p.I165I,THSD1:NM_199263:exon3:c.C495T:p.I165I	exonic	ENSG00000136114	NA	synonymous SNV	ENSG00000136114:ENST00000258613:exon3:c.C495T:p.I165I,ENSG00000136114:ENST00000349258:exon3:c.C495T:p.I165I	NA	NA	13q14.3	NA	NA	NA	NA	rs3803264	0.61	0.61	0.606	0.58766	0.6889	0.6458	0.6383	0.4758	0.5389	0.67	0.63	0.64	0.48	0.638	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.587535	NA	NA	0.668372	0.47163	NA	0.645	NA	3.6713946
1285	3	2404329	2404329	C	T	intronic	CNTN4	NA	NA	NA	ncRNA_exonic	ENSG00000230398	NA	NA	NA	NA	NA	3p26.3	NA	NA	NA	NA	rs1847169	0.75	0.75	0.787	0.746206	0.662	0.88	0.5865	0.8654	0.6472	0.66	0.89	0.6	0.84	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.481994	NA	NA	NA	NA	NA	0.768	NA	3.6713333
1285	14	33015014	33015014	G	A	exonic	AKAP6	NA	synonymous SNV	AKAP6:NM_004274:exon4:c.G1155A:p.T385T	exonic	ENSG00000151320	NA	synonymous SNV	ENSG00000151320:ENST00000553547:exon3:c.G429A:p.T143T,ENSG00000151320:ENST00000280979:exon4:c.G1155A:p.T385T,ENSG00000151320:ENST00000557272:exon4:c.G1155A:p.T385T,ENSG00000151320:ENST00000557354:exon4:c.G1155A:p.T385T	NA	NA	14q12	NA	NA	NA	NA	rs7150894	0.74	0.74	0.731	0.728634	0.6561	0.6171	0.781	0.9781	0.544	0.68	0.62	0.75	0.97	0.6819	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.423655	NA	NA	0.657558	0.924194	NA	0.754	NA	3.6711086
1285	2	148680427	148680427	G	C	intronic	ACVR2A	NA	NA	NA	intronic	ENSG00000121989	NA	NA	NA	NA	NA	2q22.3	NA	NA	NA	NA	rs2303392	0.39	0.39	0.379	0.360823	0.329	0.4831	0.464	0.295	0.2832	0.35	0.49	0.45	0.31	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.557983	NA	NA	NA	NA	NA	0.486	NA	3.671
1285	5	150838284	150838284	C	G	intronic	SLC36A1	NA	NA	NA	intronic	ENSG00000123643	NA	NA	NA	NA	NA	5q33.1	NA	NA	NA	NA	rs35256722	0.45	0.45	0.446	0.484625	0.329	0.6438	0.2882	0.4909	0.6115	0.32	0.63	0.34	0.51	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.27403	NA	NA	NA	NA	NA	0.391	NA	3.671
1285	7	138597036	138597036	A	G	intronic	KIAA1549	NA	NA	NA	intronic	ENSG00000122778	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs3735013	0.31	0.31	0.327	0.320687	0.329	0.0625	0.2104	0.6165	0.2566	0.32	0.08	0.22	0.63	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.864355	NA	NA	NA	NA	NA	0.333	NA	3.671
1285	7	35271254	35271254	T	C	intronic	TBX20	NA	NA	NA	intronic	ENSG00000164532	NA	NA	NA	NA	NA	7p14.2	NA	NA	NA	NA	rs2075047	0.12	0.12	0.129	0.0888578	0.1511	0.0625	0.1282	0.0794	0.0368	0.16	0.08	0.16	0.09	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.355714	2.355714	NA	0.17819	0.092486	NA	0.087	NA	3.67071
1285	2	20939706	20939706	T	C	intronic	C2orf43	NA	NA	NA	intronic	ENSG00000118961	NA	NA	NA	NA	NA	2p24.1	NA	NA	NA	NA	rs2046325	0.3	0.3	0.113	NA	NA	NA	NA	NA	NA	0.32	0.5	0.3	0.03	0.325	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.325875	NA	NA	0.00442	0.000908	NA	NA	NA	3.67058
1285	2	220136155	220136155	T	C	ncRNA_exonic	TUBA4B	NA	NA	NA	ncRNA_exonic	ENSG00000243910	NA	NA	NA	Score=712;Name=lod=1039	NA	2q35	NA	NA	NA	NA	rs7594971	0.99	0.99	0.983	0.987021	1	1	0.9971	0.9523	1	1	1	1	0.95	0.9962	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.227647	NA	1	NA	NA	NA	0.993	NA	3.6704666
1285	14	106791200	106791200	G	A	intergenic	LINC00226,LINC00221	dist=46234;dist=147255	NA	NA	exonic	ENSG00000211953	NA	synonymous SNV	ENSG00000211953:ENST00000390613:exon2:c.C156T:p.G52G	NA	NA	14q32.33	NA	NA	NA	NA	rs8017285	NA	NA	NA	0.484625	0.3708	0.5486	0.3905	0.5681	0.4898	NA	NA	NA	NA	0.4567	0.0057	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.810083	NA	NA	0.002045	0.005699	NA	NA	NA	3.670455
1285	5	94852180	94852180	G	A	intronic	TTC37	NA	NA	NA	intronic	ENSG00000198677	NA	NA	NA	NA	NA	5q15	NA	NA	NA	NA	rs6861524	0.12	0.12	0.126	0.136182	0.1093	0.0109	0.1095	0.3101	0.0767	0.11	0.0035	0.14	0.28	0.1103	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.477215	NA	NA	0.110049	0.270246	NA	0.217	NA	3.670351
1285	6	32362433	32362433	C	A	downstream	BTNL2,HCG23	NA	NA	NA	intronic	ENSG00000204290	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs41443753	0.16	0.16	0.147	0.163938	0.163	0.1587	0.1599	0.1422	0.2025	0.16	0.18	0.18	0.12	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.116071	NA	NA	NA	NA	NA	0.145	NA	3.6703333
1285	6	32362453	32362453	A	G	downstream	BTNL2,HCG23	NA	NA	NA	intronic	ENSG00000204290	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs41499544	0.16	0.16	0.158	0.169329	0.163	0.1587	0.1657	0.1596	0.2025	0.16	0.18	0.18	0.14	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.154085	NA	NA	NA	NA	NA	0.036	NA	3.6703333
1285	17	17050573	17050573	G	A	intronic	MPRIP	NA	NA	NA	intronic	ENSG00000133030	NA	NA	NA	NA	NA	17p11.2	NA	NA	Name=40	NA	rs3744134	0.54	0.54	0.484	0.497204	0.6789	0.7153	0.5937	0.0817	0.5787	0.68	0.7	0.6	0.1	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.671276	NA	NA	0.650849	0.15896	NA	0.362	NA	3.670251
1285	5	37176091	37176091	A	G	intronic	C5orf42	NA	NA	NA	intronic	ENSG00000197603	NA	NA	NA	NA	NA	5p13.2	NA	NA	NA	NA	rs10805625	0.12	0.12	0.126	0.142372	0.0954	0.0675	0.1499	0.2549	0.1104	0.09	0.02	0.17	0.24	0.1239	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.603572	NA	NA	0.110698	0.222878	NA	0.058	NA	3.670002
1285	2	219288899	219288899	C	T	intronic	VIL1	NA	NA	NA	intronic	ENSG00000127831	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs3731866	0.22	0.22	0.22	0.194289	0.33	0.1081	0.3055	0.0923	0.2025	0.32	0.11	0.29	0.13	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.111691	NA	NA	NA	NA	NA	0.239	NA	3.67
1285	5	6617011	6617011	C	A	intronic	NSUN2	NA	NA	NA	intronic	ENSG00000037474	NA	NA	NA	NA	NA	5p15.31	NA	Name=CEBPB	NA	NA	rs6887702	0.68	0.68	NA	0.666534	0.67	0.6736	0.6124	0.7095	0.636	0.66	0.68	0.65	0.72	0.66	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.898593	NA	NA	NA	NA	NA	0.435	NA	3.67
1285	6	76735065	76735065	A	G	intronic	IMPG1	NA	NA	NA	intronic	ENSG00000112706	NA	NA	NA	NA	NA	6q14.1	NA	NA	NA	NA	rs1341568	0.39	0.39	0.361	0.36881	0.33	0.4792	0.402	0.3268	0.3282	0.35	0.49	0.4	0.35	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.762535	NA	NA	NA	NA	NA	0.384	NA	3.67
1285	9	95645020	95645020	A	C	intergenic	ZNF484,FGD3	dist=4700;dist=64581	NA	NA	ncRNA_exonic	ENSG00000226668	NA	NA	NA	NA	NA	9q22.31	NA	NA	NA	NA	rs2296060	0.32	0.32	0.274	0.317891	0.33	0.125	0.4697	0.4304	0.2444	0.31	0.12	0.49	0.45	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.449429	NA	NA	NA	NA	NA	0.326	NA	3.67
1285	2	133014678	133014678	A	G	ncRNA_intronic	ANKRD30BL	NA	NA	NA	upstream	ENSG00000221288	NA	NA	NA	NA	NA	2q21.2	NA	NA	NA	NA	rs72869462	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4971	0.065	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.134014	NA	NA	NA	NA	NA	0.043	NA	3.6695666
1285	21	47699856	47699856	G	A	intronic	MCM3AP	NA	NA	NA	intronic	ENSG00000160294	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs2839195	0.18	0.18	0.207	0.205471	0.1173	0.006	0.0965	0.5537	0.1084	0.11	0.01	0.11	0.52	0.1146	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.051054	NA	NA	0.098605	0.466863	NA	0.254	NA	3.669495
1285	21	47678774	47678774	A	G	intronic	MCM3AP	NA	NA	NA	ncRNA_intronic	ENSG00000215424	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs2839178	0.61	0.61	0.596	0.625599	0.664	0.3641	0.7061	0.7526	0.6268	0.66	0.32	0.73	0.78	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.205317	NA	NA	NA	NA	NA	0.565	NA	3.6693333
1285	20	25264910	25264910	T	C	intronic	PYGB	NA	NA	NA	intronic	ENSG00000100994	NA	NA	NA	NA	NA	20p11.21	NA	Name=Pol2	NA	NA	rs2257712	0.55	0.55	0.539	0.536941	0.4334	0.9107	0.3473	0.4516	0.5082	0.44	0.93	0.35	0.44	0.461	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.362568	NA	NA	0.436395	0.431684	NA	0.486	NA	3.669205
1285	2	170050472	170050472	T	C	intronic	LRP2	NA	NA	NA	intronic	ENSG00000081479	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	rs2075248	0.52	0.52	0.557	0.523962	0.331	0.5417	0.3127	0.8918	0.3569	0.35	0.56	0.33	0.88	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.593342	NA	NA	NA	NA	NA	0.428	NA	3.669
1285	10	129179426	129179426	T	C	intronic	DOCK1	NA	NA	NA	intronic	ENSG00000150760	NA	NA	NA	NA	NA	10q26.2	NA	NA	NA	NA	rs7099958	0.31	0.31	0.294	0.306709	0.331	0.2599	0.2233	0.3578	0.32	0.33	0.27	0.28	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4175	NA	NA	NA	NA	NA	0.312	NA	3.669
1285	12	6953257	6953257	A	C	intronic	GNB3	NA	NA	NA	intronic	ENSG00000111664	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs11064426	0.52	0.52	0.468	0.539537	0.331	0.5556	0.4078	0.9047	0.3374	0.33	0.51	0.45	0.88	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.537734	NA	NA	NA	NA	NA	0.442	NA	3.669
1285	16	28825420	28825420	C	T	intergenic	EIF3CL,ATXN2L	dist=78367;dist=8949	NA	NA	ncRNA_exonic	ENSG00000240634	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs11860513	0.27	0.27	0.232	0.262979	0.331	0.125	0.4885	0.2322	0.2168	0.34	0.13	0.41	0.21	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.81243	NA	NA	NA	NA	NA	0.159	NA	3.669
1285	17	5358671	5358671	C	T	intronic	DHX33	NA	NA	NA	intronic	ENSG00000005100	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs11867311	0.43	0.43	0.459	0.458466	0.331	0.3661	0.2363	0.7912	0.3926	0.33	0.37	0.26	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.424469	1.424469	NA	NA	NA	NA	0.428	NA	3.669
1285	19	53005249	53005249	A	G	intronic	ZNF578	NA	NA	NA	intronic	ENSG00000258405	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs9304729	0.25	0.25	0.26	0.269369	0.331	0.0853	0.317	0.3222	0.2904	0.32	0.08	0.32	0.28	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.694897	NA	NA	NA	NA	NA	0.355	NA	3.669
1285	2	133014510	133014510	T	C	ncRNA_intronic	ANKRD30BL	NA	NA	NA	downstream	ENSG00000221288	NA	NA	NA	NA	NA	2q21.2	NA	NA	NA	NA	rs9287404	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4977	0.087	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.614356	NA	NA	NA	NA	NA	0.058	NA	3.6689666
1285	12	122212525	122212525	C	G	intronic	TMEM120B	NA	NA	NA	intronic	ENSG00000188735	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs11043195	0.23	0.23	0.227	0.286542	0.0924	0.3403	0.1239	0.4554	0.318	0.08	0.31	0.13	0.43	0.1566	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.14358	NA	NA	0.082057	0.387088	NA	0.225	NA	3.668943
1285	11	71249386	71249386	T	C	exonic	KRTAP5-8	NA	synonymous SNV	KRTAP5-8:NM_021046:exon1:c.T285C:p.C95C	exonic	ENSG00000241233	NA	synonymous SNV	ENSG00000241233:ENST00000398534:exon1:c.T285C:p.C95C	NA	NA	11q13.4	NA	Name=TCF12	NA	NA	rs7101792	0.89	0.89	0.998	0.997204	1	1	0.9798	1	1	0.9	0.92	0.91	0.83	0.9979	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.322448	NA	NA	0.999883	0.999318	NA	0.413	NA	3.6688836
1285	17	35478362	35478362	T	C	exonic	ACACA	NA	synonymous SNV	ACACA:NM_198837:exon48:c.A5904G:p.T1968T,ACACA:NM_198838:exon49:c.A5844G:p.T1948T,ACACA:NM_198834:exon50:c.A6189G:p.T2063T,ACACA:NM_198836:exon50:c.A6078G:p.T2026T,ACACA:NM_198839:exon54:c.A6078G:p.T2026T	exonic	ENSG00000132142	NA	synonymous SNV	ENSG00000132142:ENST00000361253:exon8:c.A456G:p.T152T,ENSG00000132142:ENST00000591119:exon17:c.A2034G:p.T678T,ENSG00000132142:ENST00000360679:exon48:c.A5904G:p.T1968T,ENSG00000132142:ENST00000335166:exon49:c.A5844G:p.T1948T,ENSG00000132142:ENST00000353139:exon50:c.A6189G:p.T2063T,ENSG00000132142:ENST00000394406:exon50:c.A6078G:p.T2026T	Score=412;Name=lod=63	NA	17q12	NA	NA	NA	NA	rs1470452	1	1	1	1	1	1	1	1	1	1	1	1	1	0.9995	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.564483	NA	NA	0.998488	0.999773	NA	0.899	NA	3.6686786
1285	7	142478986	142478986	A	G	ncRNA_intronic	PRSS3P2	NA	NA	NA	ncRNA_intronic	ENSG00000250606	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs73742443	NA	NA	0.675	0.940096	0.998	0.997	0.9798	0.789	0.998	NA	NA	NA	NA	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.553825	NA	NA	NA	NA	NA	0.594	NA	3.6686666
1285	7	48280454	48280454	G	A	intronic	ABCA13	NA	NA	NA	intronic	ENSG00000179869	NA	NA	NA	NA	NA	7p12.3	NA	NA	NA	NA	rs62449168	0.12	0.12	0.1	0.117013	0.1004	0.1528	0.1671	0.0295	0.18	0.1	0.18	0.16	0.04	0.1261	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.56372	NA	NA	0.105013	0.04543	NA	0.094	NA	3.668487
1285	11	100207731	100207731	A	C	intronic	CNTN5	NA	NA	NA	ncRNA_exonic	ENSG00000255547	NA	NA	NA	NA	NA	11q22.1	NA	NA	NA	NA	rs1216191	0.81	0.81	0.83	0.799321	0.665	0.9692	0.7046	0.91	0.68	0.65	0.98	0.71	0.92	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.921581	NA	NA	NA	NA	NA	0.768	NA	3.6683333
1285	4	114458402	114458402	G	A	intronic	CAMK2D	NA	NA	NA	intronic	ENSG00000145349	NA	NA	NA	NA	NA	4q26	NA	NA	NA	NA	rs734348	0.37	0.37	0.368	0.348842	0.332	0.2956	0.3573	0.5439	0.1513	0.33	0.28	0.36	0.53	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.28511	NA	NA	NA	NA	NA	0.355	NA	3.668
1285	14	51226439	51226439	C	G	intronic	NIN	NA	NA	NA	intronic	ENSG00000100503	NA	NA	NA	NA	NA	14q22.1	NA	NA	NA	NA	rs12892462	0.36	0.36	0.301	0.34365	0.332	0.5228	0.4395	0.1566	0.3558	0.34	0.53	0.45	0.14	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.320049	NA	NA	NA	NA	NA	0.355	NA	3.668
1285	19	3823192	3823192	T	C	intronic	ZFR2	NA	NA	NA	intronic	ENSG00000105278	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs34503630	0.24	0.24	0.186	0.189896	0.332	0.2679	0.3357	0.0121	0.1002	0.32	0.26	0.35	0.02	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.533971	NA	NA	NA	NA	NA	0.138	NA	3.668
1285	1	168208308	168208308	T	C	intronic	SFT2D2	NA	NA	NA	intronic	ENSG00000213064	NA	NA	NA	NA	NA	1q24.2	NA	Name=Pol2-4H8	NA	NA	rs12142742	0.57	0.57	0.567	0.534145	0.669	0.4405	0.5533	0.5741	0.4243	0.67	0.45	0.58	0.55	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.687741	NA	NA	0.663105	0.53685	NA	0.601	NA	3.667895
1285	19	10169477	10169477	G	A	ncRNA_intronic	C3P1	NA	NA	NA	ncRNA_intronic	ENSG00000167798	NA	NA	NA	Score=243;Name=lod=13	NA	19p13.2	NA	NA	NA	NA	rs11667515	0.66	0.66	0.682	0.638179	0.6839	0.4216	0.7104	0.8313	0.502	0.7	0.45	0.67	0.83	0.6571	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.813909	1.813909	NA	0.657933	0.804859	NA	0.696	NA	3.6677336
1285	10	69299446	69299446	T	A	intronic	CTNNA3	NA	NA	NA	intronic	ENSG00000183230	NA	NA	NA	NA	NA	10q21.3	NA	NA	NA	NA	rs1909654	0.16	0.16	0.167	0.195487	0.0974	0.006	0.0937	0.5015	0.1503	0.09	0.0017	0.11	0.52	0.133	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.388629	1.388629	NA	0.102442	0.448025	NA	0.188	NA	3.667158
1285	1	81968520	81968520	A	G	intergenic	NONE,LPHN2	dist=NONE;dist=297562	NA	NA	ncRNA_exonic	ENSG00000227288	NA	NA	NA	NA	NA	1p31.1	NA	NA	NA	NA	rs6666988	0.51	0.51	0.489	0.602236	0.333	0.6101	0.5	0.9017	0.5389	0.29	0.55	0.46	0.81	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.350916	NA	NA	NA	NA	NA	0.551	NA	3.667
1285	6	151130691	151130691	G	C	intronic	PLEKHG1	NA	NA	NA	intronic	ENSG00000120278	NA	NA	NA	NA	NA	6q25.1	NA	NA	NA	NA	rs712216	0.25	0.25	0.247	0.213259	0.333	0.1786	0.1974	0.2027	0.1513	0.33	0.21	0.22	0.22	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.77347	NA	NA	NA	NA	NA	0.246	NA	3.667
1285	9	114348513	114348513	G	A	intronic	PTGR1	NA	NA	NA	intronic	ENSG00000106853	NA	NA	NA	NA	NA	9q31.3	NA	NA	NA	NA	rs2273786	0.34	0.34	0.355	0.358626	0.333	0.1815	0.3429	0.5461	0.3252	0.34	0.14	0.33	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.266586	NA	NA	NA	NA	NA	0.406	NA	3.667
1285	10	79589904	79589904	C	T	intronic	DLG5	NA	NA	NA	intronic	ENSG00000151208	NA	NA	NA	NA	NA	10q22.3	NA	NA	NA	NA	rs55854323	0.22	0.22	0.212	0.209864	0.333	0.1736	0.2233	0.0635	0.3088	0.32	0.2	0.26	0.06	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.750554	NA	NA	NA	NA	NA	0.21	NA	3.667
1285	11	68839334	68839334	G	A	intronic	TPCN2	NA	NA	NA	intronic	ENSG00000162341	NA	NA	NA	NA	NA	11q13.3	NA	NA	NA	NA	rs10896415	0.2	0.2	0.164	0.158347	0.333	0.1855	0.2017	0.0363	0.0849	0.31	0.17	0.25	0.04	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.733321	NA	NA	NA	NA	NA	0.13	NA	3.667
1285	12	123339358	123339358	C	G	intronic	HIP1R	NA	NA	NA	intronic	ENSG00000130787	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs2292137	0.21	0.21	0.202	0.160942	0.333	0.2014	0.2147	0.031	0.0798	0.34	0.19	0.22	0.03	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.645924	NA	NA	NA	NA	NA	0.232	NA	3.667
1285	19	5694630	5694630	C	T	intronic	LONP1	NA	NA	NA	intronic	ENSG00000196365	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs2436514	0.32	0.32	0.301	0.3127	0.333	0.1319	0.3458	0.447	0.273	0.32	0.15	0.36	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.394664	NA	NA	NA	NA	NA	0.413	NA	3.667
1285	1	111783996	111783996	A	G	exonic	CHI3L2	NA	synonymous SNV	CHI3L2:NM_001025197:exon8:c.A936G:p.Q312Q,CHI3L2:NM_001025199:exon8:c.A729G:p.Q243Q,CHI3L2:NM_004000:exon9:c.A966G:p.Q322Q	exonic	ENSG00000064886	NA	synonymous SNV	ENSG00000064886:ENST00000472825:exon2:c.A54G:p.Q18Q,ENSG00000064886:ENST00000497220:exon4:c.A345G:p.Q115Q,ENSG00000064886:ENST00000369744:exon8:c.A936G:p.Q312Q,ENSG00000064886:ENST00000466741:exon8:c.A729G:p.Q243Q,ENSG00000064886:ENST00000524472:exon8:c.A729G:p.Q243Q,ENSG00000064886:ENST00000369748:exon9:c.A966G:p.Q322Q,ENSG00000064886:ENST00000445067:exon11:c.A966G:p.Q322Q	Score=410;Name=lod=62	NA	1p13.3	NA	NA	NA	NA	rs2494007	1	1	0.999	0.999401	1	1	1	0.9977	1	1	1	1	1	0.9998	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.301773	NA	NA	1	0.998184	NA	1	NA	3.6668666
1285	17	44360632	44360632	A	C	intergenic	KANSL1,LRRC37A	dist=57892;dist=11865	NA	NA	intronic	ENSG00000228696	NA	NA	NA	NA	NA	17q21.31	NA	NA	NA	NA	rs79559587	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.343259	NA	NA	NA	NA	NA	NA	NA	3.6666667
1285	22	29806131	29806131	T	C	intergenic	AP1B1,RFPL1S	dist=21559;dist=26873	NA	NA	intronic	ENSG00000100280	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs142073843	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.355207	NA	NA	NA	NA	NA	NA	NA	3.6666667
1285	22	29806132	29806132	A	G	intergenic	AP1B1,RFPL1S	dist=21560;dist=26872	NA	NA	intronic	ENSG00000100280	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs141132381	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.766062	NA	NA	NA	NA	NA	NA	NA	3.6666667
1285	11	48347539	48347539	G	A	downstream	OR4C3	NA	NA	NA	downstream	ENSG00000176547	NA	NA	NA	NA	NA	11p11.2	NA	NA	NA	NA	rs79172951	NA	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.087	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.477929	NA	NA	NA	NA	NA	0.065	NA	3.6666666
1285	11	116694054	116694054	T	G	upstream	APOA4	NA	NA	NA	upstream	ENSG00000110244	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs185319115	0.0046	0.0046	NA	0.00259585	NA	NA	0.0058	0.0068	NA	NA	NA	0.01	0.01	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.050171	NA	NA	NA	NA	NA	0.007	NA	3.6666666
1285	17	21903195	21903195	G	C	upstream	FLJ36000	NA	NA	NA	downstream	ENSG00000266172	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs71208397	NA	NA	0.042	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.628236	NA	NA	NA	NA	NA	NA	NA	3.6666666
1285	6	154749225	154749225	A	T	intronic	CNKSR3	NA	NA	NA	intronic	ENSG00000153721	NA	NA	NA	NA	NA	6q25.2	NA	NA	Name=10	NA	rs9384217	0.38	0.38	0.369	0.358427	0.4235	0.3889	0.379	0.2753	0.3579	0.4	0.4	0.43	0.28	0.4299	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.676389	NA	NA	0.479991	0.311847	NA	0.326	NA	3.666609
1285	5	37187489	37187489	G	A	intronic	C5orf42	NA	NA	NA	intronic	ENSG00000197603	NA	NA	NA	NA	NA	5p13.2	NA	NA	NA	NA	rs78164677	0.12	0.12	0.122	0.144968	0.0954	0.0655	0.1556	0.2625	0.1115	0.09	0.02	0.18	0.25	0.1277	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.438213	1.438213	NA	0.110335	0.228078	NA	0.065	NA	3.666565
1285	12	62273224	62273224	G	C	intronic	FAM19A2	NA	NA	NA	ncRNA_exonic	ENSG00000257528	NA	NA	NA	NA	NA	12q14.1	NA	NA	NA	NA	rs7308172	0.75	0.75	0.727	0.783546	0.667	0.874	0.7536	0.789	0.8241	0.68	0.84	0.73	0.78	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.6953	NA	NA	NA	NA	NA	0.623	NA	3.6663333
1285	1	10357406	10357406	A	G	intronic	KIF1B	NA	NA	NA	intronic	ENSG00000054523	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs3748577	0.35	0.35	0.332	0.32508	0.334	0.3472	0.3732	0.3116	0.2771	0.34	0.37	0.4	0.32	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.863507	NA	NA	NA	NA	NA	0.312	NA	3.666
1285	2	27015903	27015903	T	C	intronic	CENPA	NA	NA	NA	intronic	ENSG00000115163	NA	NA	NA	NA	NA	2p23.3	NA	NA	NA	NA	rs2289017	0.26	0.26	0.258	0.240815	0.334	0.2937	0.2378	0.115	0.2628	0.33	0.28	0.28	0.12	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.406772	NA	NA	NA	NA	NA	0.268	NA	3.666
1285	2	27016259	27016259	A	G	intronic	CENPA	NA	NA	NA	intronic	ENSG00000115163	NA	NA	NA	NA	NA	2p23.3	NA	NA	NA	NA	rs11687642	0.26	0.26	0.254	0.240615	0.334	0.2927	0.2378	0.115	0.2628	0.33	0.28	0.28	0.12	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.523665	NA	NA	NA	NA	NA	0.268	NA	3.666
1285	2	69045256	69045256	C	A	intronic	ARHGAP25	NA	NA	NA	intronic	ENSG00000163219	NA	NA	NA	NA	NA	2p13.3	NA	NA	NA	NA	rs13418133	0.33	0.33	0.337	0.286142	0.334	0.4097	0.3156	0.2277	0.1677	0.31	0.49	0.27	0.23	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.660933	NA	NA	NA	NA	NA	0.268	NA	3.666
1285	2	113590467	113590467	C	T	intronic	IL1B	NA	NA	NA	intronic	ENSG00000125538	NA	NA	NA	NA	NA	2q13	NA	NA	NA	NA	rs1143633	0.35	0.35	0.365	0.310903	0.334	0.5387	0.2911	0.174	0.2515	0.32	0.57	0.32	0.17	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.43715	NA	NA	NA	NA	NA	0.326	NA	3.666
1285	2	201485747	201485747	G	T	intronic	AOX1	NA	NA	NA	intronic	ENSG00000138356	NA	NA	NA	NA	NA	2q33.1	NA	NA	NA	NA	rs6761252	0.29	0.29	0.29	0.327276	0.334	0.1677	0.3199	0.3517	0.4571	0.33	0.16	0.33	0.34	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.117794	NA	NA	NA	NA	NA	0.21	NA	3.666
1285	9	71850853	71850853	G	A	intronic	TJP2	NA	NA	NA	intronic	ENSG00000119139	NA	NA	NA	NA	NA	9q21.11	NA	NA	NA	NA	rs2275431	0.22	0.22	0.2	0.228435	0.334	0.1706	0.1988	0.0832	0.3967	0.33	0.18	0.2	0.11	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.523862	NA	NA	NA	NA	NA	0.312	NA	3.666
1285	10	12595443	12595443	C	T	intronic	CAMK1D	NA	NA	NA	intronic	ENSG00000183049	NA	NA	NA	NA	NA	10p13	NA	NA	NA	NA	rs1077744	0.25	0.25	0.211	0.252796	0.334	0.1002	0.2781	0.2421	0.3231	0.34	0.12	0.3	0.22	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.702809	NA	NA	NA	NA	NA	0.203	NA	3.666
1285	10	100146895	100146895	T	C	intronic	PYROXD2	NA	NA	NA	intronic	ENSG00000119943	NA	NA	NA	NA	NA	10q24.2	NA	NA	NA	NA	rs2296438	0.48	0.48	0.466	0.521166	0.334	0.5655	0.4755	0.6399	0.5399	0.34	0.57	0.45	0.62	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.05375	NA	NA	NA	NA	NA	0.391	NA	3.666
1285	11	67554662	67554662	T	G	intergenic	ALDH3B2,FAM86C2P	dist=105977;dist=4576	NA	NA	ncRNA_intronic	ENSG00000227620	NA	NA	NA	NA	NA	11q13.2	NA	NA	NA	NA	rs11227952	0.4	0.4	0.385	0.411142	0.334	0.6825	0.2867	0.2315	0.5419	0.36	0.67	0.29	0.23	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.022485	NA	NA	NA	NA	NA	0.051	NA	3.666
1285	16	70531366	70531366	C	T	intronic	COG4	NA	NA	NA	intronic	ENSG00000103051	NA	NA	NA	NA	NA	16q22.1	NA	NA	NA	NA	rs2303792	0.41	0.41	0.4	0.440096	0.334	0.5823	0.3833	0.2784	0.6616	0.33	0.59	0.4	0.33	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.154019	NA	NA	NA	NA	NA	0.464	NA	3.666
1285	22	23098193	23098193	C	T	intergenic	GGTLC2,MIR650	dist=107825;dist=67077	NA	NA	ncRNA_exonic	ENSG00000253786	NA	NA	NA	NA	NA	22q11.22	NA	NA	NA	NA	rs34051623	0.23	0.23	0.211	0.240415	0.334	0.121	0.2089	0.1891	0.3589	0.34	0.08	0.25	0.21	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.237953	NA	NA	NA	NA	NA	0.174	NA	3.666
1285	17	58011498	58011498	G	T	intronic	RPS6KB1	NA	NA	NA	intronic	ENSG00000108443	NA	NA	NA	Score=265;Name=lod=16	NA	17q23.1	NA	NA	NA	NA	rs180524	0.58	0.58	0.601	0.583466	0.4195	0.5764	0.4986	0.8971	0.3957	0.42	0.6	0.47	0.89	0.4781	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.382831	1.382831	NA	0.436816	0.811847	ID=COSN165480;OCCURENCE=1(breast)	0.645	NA	3.665584
1285	3	48454468	48454468	C	T	intronic	PLXNB1	NA	NA	NA	intronic	ENSG00000164050	NA	NA	NA	NA	NA	3p21.31	NA	NA	Name=8	NA	rs3214041	0.37	0.37	0.357	0.354633	0.4632	0.3413	0.3746	0.3048	0.3098	0.45	0.33	0.37	0.27	0.4017	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.606031	NA	NA	0.469535	0.332955	NA	0.449	NA	3.665565
1285	6	24433693	24433693	C	T	intronic	GPLD1	NA	NA	NA	intronic	ENSG00000112293	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs76071181	0.13	0.13	0.126	0.109625	0.1879	0.1448	0.0922	0.0144	0.1339	0.2	0.15	0.09	0.02	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.710564	NA	NA	0.146541	0.03685	NA	0.08	NA	3.665559
1285	22	19506476	19506476	C	T	intronic	CDC45	NA	NA	NA	intronic	ENSG00000093009	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs13447289	0.14	0.14	0.141	0.128994	0.0954	0.252	0.1239	0.0885	0.0951	0.1	0.26	0.11	0.09	0.1273	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.012474	NA	NA	0.111744	0.095552	NA	0.094	NA	3.665556
1285	3	197409526	197409526	T	C	intronic	KIAA0226	NA	NA	NA	intronic	ENSG00000145016	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs9817144	0.2	0.2	0.217	0.22524	0.1113	0.0327	0.0793	0.615	0.1176	0.11	0.04	0.08	0.6	0.1237	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.607917	NA	NA	0.099601	0.517463	NA	0.312	NA	3.665399
1285	11	12903565	12903565	G	A	intronic	TEAD1	NA	NA	NA	intronic	ENSG00000187079	NA	NA	NA	NA	NA	11p15.2	NA	NA	NA	NA	rs2304734	0.23	0.23	0.196	0.16234	0.164	0.4732	0.1167	0.0068	0.0828	0.18	0.53	0.15	0.01	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.712155	NA	NA	0.170647	0.037572	NA	0.123	NA	3.665353
1285	22	38341134	38341134	T	C	exonic	C22orf23	NA	synonymous SNV	C22orf23:NM_001207062:exon4:c.A333G:p.T111T,C22orf23:NM_032561:exon5:c.A396G:p.T132T	exonic	ENSG00000128346	NA	synonymous SNV	ENSG00000128346:ENST00000249079:exon5:c.A396G:p.T132T,ENSG00000128346:ENST00000403026:exon5:c.A396G:p.T132T,ENSG00000128346:ENST00000403305:exon5:c.A396G:p.T132T,ENSG00000128346:ENST00000418863:exon5:c.A396G:p.T132T	NA	NA	22q13.1	NA	NA	NA	NA	rs139859	0.77	0.77	0.777	0.78135	0.6531	0.8353	0.67	0.9667	0.6861	0.65	0.83	0.64	0.96	0.6933	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.555301	NA	NA	0.655	0.927826	NA	0.768	NA	3.6652666
1286	2	201488435	201488435	T	C	intronic	AOX1	NA	NA	NA	intronic	ENSG00000138356	NA	NA	NA	NA	NA	2q33.1	NA	NA	NA	NA	rs3795968	0.29	0.29	0.282	0.328275	0.335	0.1677	0.3199	0.3555	0.456	0.33	0.16	0.33	0.34	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.065136	NA	NA	NA	NA	NA	0.21	NA	3.665
1286	7	2290336	2290336	T	A	intronic	NUDT1	NA	NA	NA	intronic	ENSG00000106268	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs10249180	0.44	0.44	NA	0.301518	0.335	0.1964	0.2277	0.4153	0.274	0.54	0.38	0.39	0.37	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.746989	NA	NA	NA	NA	NA	0.21	NA	3.665
1286	10	99125788	99125788	G	C	intronic	RRP12	NA	NA	NA	intronic	ENSG00000052749	NA	NA	NA	NA	NA	10q24.1	NA	NA	NA	NA	rs10882907	0.38	0.38	0.391	0.415136	0.335	0.3105	0.3501	0.5946	0.409	0.33	0.28	0.34	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.298253	NA	NA	NA	NA	NA	0.341	NA	3.665
1286	10	99130127	99130127	A	G	intronic	RRP12	NA	NA	NA	intronic	ENSG00000052749	NA	NA	NA	NA	NA	10q24.1	NA	NA	NA	NA	rs3737194	0.42	0.42	0.406	0.465455	0.335	0.3641	0.3559	0.7231	0.4335	0.33	0.33	0.34	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.850608	NA	NA	NA	NA	NA	0.384	NA	3.665
1286	17	55674423	55674423	G	A	intronic	MSI2	NA	NA	NA	intronic	ENSG00000153944	NA	NA	NA	NA	NA	17q22	NA	NA	NA	NA	rs6503820	0.34	0.34	0.311	0.336262	0.335	0.2877	0.4294	0.3147	0.3507	0.33	0.32	0.39	0.33	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.068721	NA	NA	NA	NA	NA	0.391	NA	3.665
1286	20	8741188	8741188	A	G	intronic	PLCB1	NA	NA	NA	intronic	ENSG00000182621	NA	NA	NA	NA	NA	20p12.3	NA	NA	NA	NA	rs2294596	0.41	0.41	0.371	0.36242	0.335	0.5516	0.487	0.2753	0.2249	0.36	0.56	0.41	0.29	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.558179	NA	NA	NA	NA	NA	0.333	NA	3.665
1286	4	17586703	17586703	T	C	exonic	LAP3	NA	synonymous SNV	LAP3:NM_015907:exon6:c.T648C:p.A216A	exonic	ENSG00000002549	NA	synonymous SNV	ENSG00000002549:ENST00000513105:exon2:c.T150C:p.A50A,ENSG00000002549:ENST00000226299:exon6:c.T648C:p.A216A,ENSG00000002549:ENST00000606142:exon6:c.T555C:p.A185A	NA	NA	4p15.32	NA	NA	NA	NA	rs3733576	0.78	0.78	0.779	0.764377	0.659	0.9018	0.7637	0.8396	0.6299	0.66	0.94	0.73	0.82	0.7088	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.82616	NA	NA	0.633953	0.822061	NA	0.812	NA	3.6649136
1286	7	107834624	107834624	T	C	intronic	NRCAM	NA	NA	NA	intronic	ENSG00000091129	NA	NA	NA	NA	NA	7q31.1	NA	Name=MafF_(M8194),MafK_(SC-477),GR,ERalpha_a,MafK_(ab50322)	Name=8	NA	rs6978315	0.73	0.73	0.702	0.698882	0.7992	0.8839	0.8012	0.441	0.681	0.8	0.89	0.8	0.4	0.7562	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.493919	1.493919	NA	0.779767	0.506582	NA	0.609	NA	3.664833
1286	8	121353651	121353651	A	G	intronic	COL14A1	NA	NA	NA	intronic	ENSG00000187955	NA	NA	NA	NA	NA	8q24.12	Score=949;Name=V$CEBPB_01	NA	NA	NA	rs1563391	0.51	0.51	0.537	0.516573	0.4334	0.4395	0.464	0.674	0.5061	0.43	0.47	0.46	0.73	0.465	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.0599	NA	NA	0.436769	0.647702	NA	0.529	NA	3.664831
1286	14	92102932	92102932	A	G	intronic	CATSPERB	NA	NA	NA	intronic	ENSG00000133962	NA	NA	NA	NA	NA	14q32.12	NA	NA	NA	NA	rs4900084	0.12	0.12	0.124	0.109824	0.1064	0.0526	0.0965	0.2284	0.0215	0.09	0.05	0.1	0.25	0.1125	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.582576	NA	NA	0.116279	0.209033	NA	0.152	NA	3.664821
1286	3	53259996	53259996	G	A	intronic	TKT	NA	NA	NA	intronic	ENSG00000163931	NA	NA	NA	NA	NA	3p21.1	NA	NA	Name=3	NA	rs3816767	0.43	0.43	0.444	0.435304	0.4642	0.6032	0.4207	0.2088	0.5491	0.46	0.59	0.4	0.21	0.4416	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.293935	NA	NA	0.429419	0.242397	NA	0.457	NA	3.664781
1286	4	69342169	69342169	G	C	intronic	TMPRSS11E	NA	NA	NA	intronic	ENSG00000087128	NA	NA	NA	NA	NA	4q13.2	NA	NA	Name=37	NA	rs983745	0.56	0.56	0.584	0.579273	0.4433	0.7688	0.451	0.5817	0.6115	0.44	0.76	0.47	0.57	0.4775	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.160606	NA	NA	0.414419	0.518611	NA	0.652	NA	3.664781
1286	18	28723596	28723596	G	C	intronic	DSC1	NA	NA	NA	ncRNA_intronic	ENSG00000265888	NA	NA	NA	NA	NA	18q12.1	NA	NA	NA	NA	rs2577072	0.37	0.37	0.378	0.346645	0.2137	0.5685	0.3761	0.4123	0.1452	0.2	0.58	0.35	0.41	0.2664	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.519277	NA	NA	0.188532	0.403768	NA	0.261	NA	3.6647013
1286	5	147492384	147492384	T	G	intronic	SPINK5	NA	NA	NA	intronic	ENSG00000133710	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs72660259	0.19	0.19	0.202	0.22504	0.0885	0.3105	0.0778	0.292	0.2914	0.09	0.31	0.08	0.28	0.1515	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.438149	NA	NA	0.095517	0.258938	NA	0.174	NA	3.664483
1286	3	53267155	53267155	G	A	intronic	TKT	NA	NA	NA	intronic	ENSG00000163931	NA	NA	NA	NA	NA	3p21.1	NA	Name=Pol2-4H8	NA	NA	rs2242301	0.43	0.43	0.443	0.434904	0.4652	0.5923	0.4193	0.2156	0.5491	0.46	0.58	0.4	0.22	0.4407	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.194222	NA	NA	0.429884	0.244893	NA	0.457	NA	3.664216
1286	6	155776854	155776854	T	G	intronic	NOX3	NA	NA	NA	intronic	ENSG00000074771	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs6906426	0.1	0.1	0.092	0.10643	0.0964	0.1181	0.2104	0.0439	0.1155	0.09	0.12	0.18	0.04	0.133	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.774805	NA	NA	0.106512	0.054925	NA	0.08	NA	3.664088
1286	19	55698859	55698859	G	A	intronic	PTPRH	NA	NA	NA	intronic	ENSG00000080031	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs68070528	0.15	0.15	0.146	0.167332	0.1113	0.1696	0.0749	0.2292	0.2045	0.11	0.16	0.08	0.24	0.1277	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.027937	NA	NA	0.096977	0.206083	NA	0.167	NA	3.664023
1286	1	166545037	166545037	A	G	intergenic	FAM78B,FMO9P	dist=409079;dist=28116	NA	NA	ncRNA_intronic	ENSG00000238087	NA	NA	NA	NA	NA	1q24.1	NA	NA	NA	NA	rs12142142	0.17	0.17	0.144	0.145966	0.336	0.002	0.196	0.0703	0.1656	0.33	NA	0.23	0.09	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.635515	NA	NA	NA	NA	NA	0.152	NA	3.664
1286	1	212553111	212553111	G	C	intronic	TMEM206	NA	NA	NA	intronic	ENSG00000065600	NA	NA	NA	NA	NA	1q32.3	NA	NA	NA	NA	rs701905	0.23	0.23	0.211	0.194688	0.336	0.1151	0.2608	0.1452	0.1513	0.33	0.11	0.3	0.15	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.373035	1.373035	NA	NA	NA	NA	0.167	NA	3.664
1286	2	31590759	31590759	C	T	intronic	XDH	NA	NA	NA	intronic	ENSG00000158125	NA	NA	NA	NA	NA	2p23.1	NA	NA	NA	NA	rs2281550	0.29	0.29	0.272	0.253195	0.336	0.256	0.2637	0.2141	0.2106	0.35	0.27	0.3	0.21	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.392133	NA	NA	NA	NA	NA	0.261	NA	3.664
1286	4	113748777	113748777	C	T	intronic	ANK2	NA	NA	NA	intronic	ENSG00000145362	NA	NA	NA	NA	NA	4q25	NA	NA	NA	NA	rs13108692	0.31	0.31	0.306	0.31889	0.336	0.3581	0.3429	0.2504	0.3364	0.33	0.35	0.33	0.24	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.635171	NA	NA	NA	NA	NA	0.29	NA	3.664
1286	5	178267999	178267999	G	A	intergenic	AACSP1,ZNF354B	dist=64722;dist=18955	NA	NA	ncRNA_exonic	ENSG00000253725	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs11743902	0.26	0.26	0.245	0.270767	0.336	0.2778	0.2161	0.1876	0.3476	0.33	0.24	0.28	0.19	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.182264	NA	NA	NA	NA	NA	0.355	NA	3.664
1286	10	100155296	100155296	T	G	intronic	PYROXD2	NA	NA	NA	intronic	ENSG00000119943	NA	NA	NA	NA	NA	10q24.2	NA	NA	NA	NA	rs11189591	0.46	0.46	0.44	0.488419	0.336	0.5645	0.4741	0.5151	0.5409	0.34	0.57	0.45	0.52	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.50468	NA	NA	NA	NA	NA	0.348	NA	3.664
1286	12	104341015	104341015	T	C	intronic	HSP90B1	NA	NA	NA	intronic	ENSG00000166598	NA	NA	NA	NA	NA	12q23.3	NA	NA	NA	NA	rs1165694	0.45	0.45	0.465	0.456869	0.336	0.4692	0.4625	0.6362	0.3221	0.33	0.47	0.43	0.63	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.098935	NA	NA	NA	NA	NA	0.471	NA	3.664
1286	12	122468756	122468756	A	G	intronic	BCL7A	NA	NA	NA	intronic	ENSG00000110987	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs59397548	0.35	0.35	0.33	0.333067	0.336	0.5446	0.3919	0.1135	0.3671	0.34	0.55	0.37	0.11	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.398436	NA	NA	NA	NA	NA	0.239	NA	3.664
1286	15	79024355	79024355	A	G	intergenic	CHRNB4,LOC646938	dist=90768;dist=20024	NA	NA	ncRNA_intronic	ENSG00000261303	NA	NA	NA	NA	NA	15q25.1	NA	NA	NA	NA	rs34099810	0.19	0.19	0.178	0.184105	0.336	0.1002	0.1556	0.0605	0.3016	0.34	0.09	0.18	0.08	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.668536	1.668536	NA	NA	NA	NA	0.181	NA	3.664
1286	11	13729639	13729639	G	A	intronic	FAR1	NA	NA	NA	intronic	ENSG00000197601	NA	NA	NA	NA	NA	11p15.2	NA	NA	NA	NA	rs183124096	0.09	0.09	NA	0.146965	0.172	0.0397	0.134	0.1225	0.274	0.12	0.02	0.14	0.09	0.1643	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.477637	2.477637	NA	NA	NA	NA	NA	NA	3.6637
1286	11	13729640	13729640	A	T	intronic	FAR1	NA	NA	NA	intronic	ENSG00000197601	NA	NA	NA	NA	NA	11p15.2	NA	NA	NA	NA	rs187817189	0.09	0.09	NA	0.146965	0.172	0.0397	0.134	0.1225	0.274	0.12	0.02	0.14	0.09	0.1643	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.60266	3.60266	NA	NA	NA	NA	NA	NA	3.6637
1286	3	124412691	124412691	G	T	intronic	KALRN	NA	NA	NA	intronic	ENSG00000160145	NA	NA	NA	NA	NA	3q21.2	NA	NA	NA	NA	rs16835881	0.11	0.11	0.115	0.117412	0.1014	0.0694	0.1182	0.18	0.0982	0.09	0.06	0.13	0.19	0.114	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.36959	NA	NA	0.121075	0.184294	NA	0.181	NA	3.663525
1286	2	31589654	31589654	T	C	intronic	XDH	NA	NA	NA	intronic	ENSG00000158125	NA	NA	NA	NA	NA	2p23.1	NA	NA	NA	NA	rs13387204	0.32	0.32	0.312	0.285343	0.337	0.2579	0.2781	0.3253	0.2117	0.35	0.28	0.31	0.33	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.762908	NA	NA	NA	NA	NA	0.29	NA	3.663
1286	3	170929190	170929190	T	C	intronic	TNIK	NA	NA	NA	intronic	ENSG00000154310	NA	NA	NA	NA	NA	3q26.31	NA	NA	NA	NA	rs2292004	0.38	0.38	0.357	0.378395	0.337	0.5764	0.3991	0.208	0.4325	0.33	0.6	0.35	0.21	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.472797	NA	NA	NA	NA	NA	0.406	NA	3.663
1286	4	6580283	6580283	A	G	intronic	MAN2B2	NA	NA	NA	intronic	ENSG00000013288	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs3764809	0.35	0.35	0.316	0.332468	0.337	0.5317	0.3516	0.1558	0.3476	0.34	0.52	0.37	0.14	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.089453	NA	NA	NA	NA	NA	0.348	NA	3.663
1286	5	32388485	32388485	G	C	intronic	ZFR	NA	NA	NA	intronic	ENSG00000056097	NA	NA	NA	NA	NA	5p13.3	NA	NA	NA	NA	rs3811972	0.28	0.28	0.284	0.251797	0.337	0.2698	0.2622	0.1452	0.2822	0.32	0.29	0.32	0.17	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.47672	2.47672	NA	NA	NA	NA	0.174	NA	3.663
1286	6	42689411	42689411	G	A	intronic	PRPH2	NA	NA	NA	intronic	ENSG00000112619	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs6928781	0.34	0.34	0.322	0.33147	0.337	0.4732	0.379	0.2761	0.2209	0.32	0.44	0.4	0.23	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.721116	NA	NA	NA	NA	NA	0.413	NA	3.663
1286	7	73108205	73108205	G	A	intronic	WBSCR22	NA	NA	NA	intronic	ENSG00000071462	NA	NA	NA	NA	NA	7q11.23	NA	NA	NA	NA	rs2293488	0.23	0.23	0.196	0.232428	0.337	0.1756	0.3473	0.0325	0.3722	0.33	0.18	0.36	0.02	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.177019	NA	NA	NA	NA	NA	0.196	NA	3.663
1286	10	99144867	99144867	C	G	intronic	RRP12	NA	NA	NA	intronic	ENSG00000052749	NA	NA	NA	NA	NA	10q24.1	NA	NA	NA	NA	rs61861865	0.24	0.24	0.148	0.404752	0.337	0.3125	0.3415	0.5552	0.411	0.21	0.2	0.24	0.36	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.142882	NA	NA	NA	NA	NA	NA	NA	3.663
1286	11	18909134	18909134	C	T	intergenic	PTPN5,MRGPRX1	dist=95745;dist=46226	NA	NA	ncRNA_exonic	ENSG00000254541	NA	NA	NA	NA	NA	11p15.1	NA	NA	NA	NA	rs12363823	0.27	0.27	0.231	0.280751	0.337	0.3274	0.3127	0.0726	0.4335	0.35	0.33	0.3	0.06	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.932067	NA	NA	NA	NA	NA	0.355	NA	3.663
1286	12	122212659	122212659	C	T	intronic	TMEM120B	NA	NA	NA	intronic	ENSG00000188735	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs11043196	0.23	0.23	0.218	0.284545	0.0934	0.3304	0.1239	0.4554	0.317	0.08	0.31	0.14	0.43	0.1618	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.949921	NA	NA	0.081823	0.382247	NA	0.225	NA	3.662977
1286	9	90388539	90388539	T	A	ncRNA_exonic	CTSL3P	NA	NA	NA	ncRNA_exonic	ENSG00000188029	NA	NA	NA	Score=458;Name=lod=97	NA	9q21.33	NA	NA	NA	NA	rs10735592	0.75	0.75	0.752	0.735024	0.6372	0.8304	0.768	0.7738	0.6616	0.66	0.82	0.76	0.81	0.7098	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.196508	NA	NA	0.656744	0.77054	NA	0.804	NA	3.6629226
1286	3	132198156	132198156	C	T	intronic	DNAJC13	NA	NA	NA	intronic	ENSG00000138246	NA	NA	NA	NA	NA	3q22.1	NA	NA	NA	NA	rs62292951	0.1	0.1	0.082	0.0944489	0.1133	0.1181	0.1311	0.0053	0.1452	0.13	0.11	0.14	0.01	0.1143	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.182143	NA	NA	0.109495	0.025897	NA	0.065	NA	3.662905
1286	7	156468378	156468378	C	A	intronic	RNF32	NA	NA	NA	ncRNA_intronic	ENSG00000225666	NA	NA	NA	NA	NA	7q36.3	NA	NA	NA	NA	rs2886381	0.33	0.33	0.047	0.376997	0.2903	0.4097	0.379	0.5227	0.2342	0.25	0.37	0.3	0.43	0.3302	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.295501	NA	NA	0.050116	0.171811	NA	NA	NA	3.6627173
1286	17	4701820	4701820	G	T	downstream	PSMB6	NA	NA	NA	downstream	ENSG00000142507	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs57101757	0.02	0.02	NA	0.0257588	0.004	NA	0.0043	0.0923	NA	0.0013	NA	0.0028	0.09	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.338203	NA	NA	NA	NA	NA	0.014	NA	3.6626666
1286	17	49054439	49054439	T	C	intronic	SPAG9	NA	NA	NA	intronic	ENSG00000008294	NA	NA	NA	NA	NA	17q21.33	NA	NA	Name=28	NA	rs9332407	0.37	0.37	0.354	0.344848	0.4563	0.2312	0.4539	0.3268	0.2945	0.44	0.23	0.47	0.36	0.4246	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.041978	NA	NA	0.457093	0.366092	ID=COSN165463;OCCURENCE=1(breast)	0.355	NA	3.662007
1286	1	10428452	10428452	G	A	intronic	KIF1B	NA	NA	NA	intronic	ENSG00000054523	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs12130563	0.36	0.36	0.339	0.334065	0.338	0.3462	0.3761	0.3351	0.2863	0.34	0.37	0.41	0.34	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.372611	NA	NA	NA	NA	ID=COSN162930;OCCURENCE=1(breast)	0.312	NA	3.662
1286	2	79254101	79254101	T	G	intronic	REG3G	NA	NA	NA	intronic	ENSG00000143954	NA	NA	NA	NA	NA	2p12	NA	NA	NA	NA	rs396461	0.43	0.43	0.362	0.461262	0.338	0.4494	0.415	0.5159	0.5593	0.34	0.48	0.43	0.48	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.338484	NA	NA	NA	NA	NA	0.42	NA	3.662
1286	2	113588302	113588302	C	T	intronic	IL1B	NA	NA	NA	intronic	ENSG00000125538	NA	NA	NA	NA	NA	2q13	NA	NA	NA	NA	rs1143643	0.33	0.33	0.312	0.28774	0.338	0.497	0.2853	0.1354	0.228	0.32	0.52	0.31	0.13	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.308566	NA	NA	NA	NA	NA	0.275	NA	3.662
1286	3	147885110	147885110	T	C	intergenic	ZIC1,AGTR1	dist=750604;dist=530548	NA	NA	ncRNA_intronic	ENSG00000244650	NA	NA	NA	NA	NA	3q24	NA	NA	NA	NA	rs2045350	0.38	0.38	0.337	0.39377	0.338	0.375	0.438	0.4501	0.363	0.34	0.39	0.42	0.42	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.70889	NA	NA	NA	NA	NA	0.275	NA	3.662
1286	9	98224360	98224360	C	G	intronic	PTCH1	NA	NA	NA	intronic	ENSG00000185920	NA	NA	NA	NA	NA	9q22.32	NA	NA	NA	NA	rs2274692	0.41	0.41	0.432	0.401358	0.338	0.3433	0.2334	0.7224	0.2117	0.35	0.34	0.22	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.124824	NA	NA	NA	NA	NA	0.362	NA	3.662
1286	17	48683200	48683200	G	C	intronic	CACNA1G	NA	NA	NA	intronic	ENSG00000006283	NA	NA	NA	NA	NA	17q21.33	NA	NA	NA	NA	rs3744521	0.43	0.43	0.38	0.413339	0.338	0.8849	0.4798	0.0446	0.456	0.34	0.88	0.4	0.07	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.392606	1.392606	NA	NA	NA	NA	0.312	NA	3.662
1286	19	44976058	44976058	C	T	intergenic	ZNF229,ZNF180	dist=23393;dist=3801	NA	NA	ncRNA_exonic	ENSG00000176761	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs2571053	0.19	0.19	0.194	0.172125	0.338	0.002	0.1715	0.1974	0.1431	0.34	0.0017	0.18	0.2	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.428273	NA	NA	NA	NA	NA	0.283	NA	3.662
1286	21	47692798	47692798	C	T	intronic	MCM3AP	NA	NA	NA	intronic	ENSG00000160294	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs2839188	0.29	0.29	0.248	0.278954	0.338	0.2599	0.4496	0.146	0.2965	0.34	0.26	0.46	0.13	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.04151	NA	NA	NA	NA	NA	0.203	NA	3.662
1286	8	143959250	143959250	T	C	intronic	CYP11B1	NA	NA	NA	exonic	ENSG00000160882	NA	synonymous SNV	ENSG00000160882:ENST00000377675:exon4:c.A531G:p.L177L	NA	NA	8q24.3	NA	NA	NA	NA	rs7818826	0.59	0.59	0.547	0.591054	0.5825	0.8065	0.6398	0.3729	0.638	0.57	0.8	0.62	0.36	0.5889	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.966768	NA	NA	NA	NA	NA	0.601	NA	3.6619333
1286	19	3738971	3738971	A	G	exonic	TJP3	NA	synonymous SNV	TJP3:NM_001267560:exon13:c.A1470G:p.P490P,TJP3:NM_001267561:exon13:c.A1497G:p.P499P	exonic	ENSG00000105289	NA	synonymous SNV	ENSG00000105289:ENST00000262968:exon12:c.A1569G:p.P523P,ENSG00000105289:ENST00000539908:exon12:c.A1362G:p.P454P,ENSG00000105289:ENST00000587686:exon12:c.A1527G:p.P509P,ENSG00000105289:ENST00000382008:exon13:c.A1512G:p.P504P,ENSG00000105289:ENST00000541714:exon13:c.A1470G:p.P490P,ENSG00000105289:ENST00000589378:exon13:c.A1497G:p.P499P	NA	NA	19p13.3	NA	NA	NA	NA	rs600986	0.69	0.69	0.687	0.698482	0.667	0.6181	0.8112	0.7179	0.7076	0.65	0.66	0.78	0.7	0.677	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.253467	NA	NA	0.660814	0.720154	NA	0.725	NA	3.6618526
1286	22	36545016	36545016	C	G	intronic	APOL3	NA	NA	NA	intronic	ENSG00000128284	NA	NA	NA	NA	NA	22q12.3	NA	NA	NA	NA	rs9610412	0.19	0.19	0.213	0.18151	0.1779	0.0337	0.1383	0.3873	0.09	0.18	0.04	0.16	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.448381	NA	NA	0.160277	0.37789	NA	0.312	NA	3.661823
1286	14	73138189	73138189	C	A	intronic	DPF3	NA	NA	NA	intronic	ENSG00000205683	NA	NA	NA	Score=295;Name=lod=21	NA	14q24.2	NA	NA	NA	NA	rs1060570	0.47	0.47	0.428	0.492212	0.4453	0.6875	0.4078	0.3593	0.5787	0.42	0.63	0.44	0.35	0.4562	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.424266	NA	NA	0.436715	0.361872	NA	0.37	NA	3.661785
1286	1	226550924	226550924	G	C	intronic	PARP1	NA	NA	NA	intronic	ENSG00000143799	NA	NA	NA	NA	NA	1q42.12	NA	Name=GATA-2	NA	NA	rs747657	0.46	0.46	0.458	0.486621	0.6759	0.2054	0.4971	0.4463	0.6288	0.65	0.2	0.52	0.43	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.053207	NA	NA	0.662476	0.467486	NA	0.435	NA	3.661624
1286	11	48186104	48186104	C	A	intronic	PTPRJ	NA	NA	NA	intronic	ENSG00000149177	NA	NA	NA	NA	NA	11p11.2	NA	NA	NA	NA	rs12225986	0.1	0.1	0.059	0.0844649	0.1054	0.1468	0.0893	0.0038	0.1043	0.11	0.16	0.09	0.002	0.1167	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.287819	NA	NA	0.11645	0.026806	ID=COSN163926;OCCURENCE=1(breast)	0.087	NA	3.66145
1286	15	34537617	34537617	G	A	intronic	SLC12A6	NA	NA	NA	intronic	ENSG00000140199	NA	NA	NA	NA	NA	15q14	NA	NA	NA	NA	rs74010036	0.08	0.08	0.072	0.0898562	0.1083	0.0258	0.0821	0.0703	0.1687	0.11	0.02	0.11	0.08	0.1073	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.095185	NA	NA	0.122964	0.076783	NA	0.043	NA	3.661436
1286	14	45633522	45633522	A	G	intronic	FANCM	NA	NA	NA	intronic	ENSG00000187790	NA	NA	NA	NA	NA	14q21.2	NA	NA	NA	NA	rs78455731	0.09	0.09	0.083	0.10643	0.1153	0.119	0.1081	0.0068	0.2178	0.13	0.12	0.09	0.01	0.1183	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.525866	NA	NA	0.105233	0.022923	NA	0.109	NA	3.661167
1286	1	36935128	36935128	G	A	intronic	CSF3R	NA	NA	NA	intronic	ENSG00000119535	NA	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	rs3917989	0.22	0.22	0.195	0.253594	0.339	0.125	0.2017	0.2012	0.4059	0.34	0.1	0.24	0.17	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.733833	NA	NA	NA	NA	NA	0.21	NA	3.661
1286	1	205033374	205033374	T	C	intronic	CNTN2	NA	NA	NA	intronic	ENSG00000184144	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs2305277	0.49	0.49	0.461	0.557109	0.339	0.876	0.5591	0.3457	0.7372	0.33	0.86	0.49	0.32	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.301646	NA	NA	NA	NA	NA	0.355	NA	3.661
1286	2	228996637	228996637	G	A	intronic	SPHKAP	NA	NA	NA	intronic	ENSG00000153820	NA	NA	NA	NA	NA	2q36.3	NA	NA	NA	NA	rs4479423	0.39	0.39	0.341	0.367212	0.339	0.4901	0.5187	0.2867	0.271	0.33	0.47	0.49	0.3	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.009892	NA	NA	NA	NA	NA	0.362	NA	3.661
1286	5	94749969	94749969	C	G	intronic	FAM81B	NA	NA	NA	intronic	ENSG00000153347	NA	NA	NA	NA	NA	5q15	NA	NA	NA	NA	rs6556866	0.24	0.24	0.254	0.219848	0.339	0.1071	0.2478	0.2428	0.1626	0.33	0.11	0.26	0.24	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.058903	NA	NA	NA	NA	NA	0.391	NA	3.661
1286	6	44107640	44107640	C	T	intronic	TMEM63B	NA	NA	NA	intronic	ENSG00000137216	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs10807295	0.26	0.26	0.249	0.251198	0.339	0.0437	0.3372	0.3185	0.2229	0.34	0.05	0.36	0.3	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.639886	NA	NA	NA	NA	NA	0.377	NA	3.661
1286	8	59535861	59535861	T	A	intronic	NSMAF	NA	NA	NA	intronic	ENSG00000035681	NA	NA	NA	NA	NA	8q12.1	NA	NA	NA	NA	rs116544617	NA	NA	NA	0.275958	0.339	0.2927	0.2032	0.261	0.2658	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.621471	NA	NA	NA	NA	NA	NA	NA	3.661
1286	9	139929015	139929015	C	G	intronic	C9orf139	NA	NA	NA	intronic	ENSG00000180539	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs9411293	0.26	0.26	0.218	0.254193	0.339	0.2351	0.3818	0.1513	0.2352	0.32	0.24	0.35	0.15	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.64233	NA	NA	NA	NA	NA	0.29	NA	3.661
1286	10	29801848	29801848	G	A	intronic	SVIL	NA	NA	NA	intronic	ENSG00000197321	NA	NA	NA	NA	NA	10p11.23	NA	NA	NA	NA	rs12775779	0.23	0.23	0.207	0.202676	0.339	0.0794	0.2911	0.1604	0.184	0.34	0.1	0.3	0.16	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.00667	NA	NA	NA	NA	NA	0.29	NA	3.661
1286	12	78571186	78571186	T	C	intronic	NAV3	NA	NA	NA	intronic	ENSG00000067798	NA	NA	NA	NA	NA	12q21.2	NA	NA	NA	NA	rs1020461	0.34	0.34	0.335	0.365615	0.339	0.3472	0.3055	0.3109	0.5286	0.34	0.35	0.36	0.3	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.464345	NA	NA	NA	NA	NA	0.283	NA	3.661
1286	12	106730034	106730034	C	T	intronic	TCP11L2	NA	NA	NA	intronic	ENSG00000166046	NA	NA	NA	NA	NA	12q23.3	NA	NA	NA	NA	rs10717199	NA	NA	NA	0.0936502	0.1879	0.0317	0.1052	0.0764	0.0757	NA	NA	NA	NA	0.1511	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.138491	2.138491	NA	NA	NA	NA	NA	NA	3.661
1286	12	125467238	125467238	G	C	intronic	DHX37	NA	NA	NA	intronic	ENSG00000150990	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs12424339	0.39	0.39	0.394	0.397963	0.339	0.4206	0.2579	0.4947	0.4039	0.35	0.42	0.28	0.5	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.001281	NA	NA	NA	NA	NA	0.406	NA	3.661
1286	16	31372290	31372290	T	C	intronic	ITGAX	NA	NA	NA	intronic	ENSG00000140678	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs11150617	0.4	0.4	0.382	0.298323	0.339	0.6706	0.3228	0.1044	0.1176	0.35	0.73	0.36	0.13	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.381414	NA	NA	NA	NA	NA	0.362	NA	3.661
1286	16	81740829	81740829	T	C	intronic	CMIP	NA	NA	NA	intronic	ENSG00000153815	NA	NA	NA	NA	NA	16q23.3	NA	NA	NA	NA	rs67721827	0.31	0.31	0.31	0.328075	0.339	0.1796	0.3141	0.4024	0.3793	0.33	0.2	0.32	0.41	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.052278	NA	NA	NA	NA	NA	0.341	NA	3.661
1286	19	13006687	13006687	G	A	intronic	GCDH	NA	NA	NA	intronic	ENSG00000105607	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs12151303	0.3	0.3	0.269	0.334665	0.339	0.1438	0.4553	0.4644	0.2658	0.31	0.13	0.43	0.39	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.706428	NA	NA	NA	NA	NA	0.065	NA	3.661
1286	19	52148617	52148617	A	G	intronic	SIGLEC14	NA	NA	NA	intronic	ENSG00000105501,ENSG00000254415,ENSG00000268500	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs4544342	0.38	0.38	0.377	0.436701	0.339	0.4335	0.3948	0.4841	0.5061	0.34	0.33	0.37	0.52	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.631006	NA	NA	NA	NA	NA	0.399	NA	3.661
1286	1	167487586	167487586	C	G	intronic	CD247	NA	NA	NA	intronic	ENSG00000198821	NA	NA	NA	NA	NA	1q24.2	NA	NA	NA	NA	rs35864197	0.09	0.09	0.091	0.110823	0.1501	0.0298	0.1095	0.0424	0.2474	0.15	0.03	0.12	0.07	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.176142	NA	NA	0.189189	0.080202	NA	0.145	NA	3.660711
1286	2	100916306	100916306	A	G	exonic	LONRF2	NA	synonymous SNV	LONRF2:NM_198461:exon5:c.T1140C:p.F380F	exonic	ENSG00000170500	NA	synonymous SNV	ENSG00000170500:ENST00000393437:exon5:c.T1140C:p.F380F,ENSG00000170500:ENST00000409647:exon5:c.T411C:p.F137F	NA	NA	2q11.2	NA	NA	NA	NA	rs2033748	0.78	0.78	0.777	0.771366	0.673	0.9405	0.7349	0.8911	0.5624	0.66	0.95	0.68	0.85	0.6885	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.563429	1.563429	NA	0.644535	0.832728	NA	0.688	NA	3.6606316
1286	1	168513109	168513109	A	G	intronic	XCL2	NA	NA	NA	intronic	ENSG00000143185	NA	NA	NA	NA	NA	1q24.2	NA	NA	NA	NA	rs3820404	0.13	0.13	0.103	0.196885	0.2028	0.0327	0.1772	0.3442	0.1748	0.15	0.01	0.17	0.2	0.1368	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.078484	NA	NA	NA	NA	NA	NA	NA	3.6604
1286	19	48250203	48250203	T	A	intronic	GLTSCR2	NA	NA	NA	intronic	ENSG00000105373	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs2334292	0.05	0.05	0.051	0.04373	0.1233	0.002	0.0591	0.0038	0.0481	0.12	0.0017	0.06	0.0041	0.0909	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.39173	NA	NA	0.125465	0.02837	NA	0.08	NA	3.660335
1286	14	92582472	92582472	G	A	UTR3	NDUFB1	NM_004545:c.*65C>T	NA	NA	UTR3	ENSG00000183648	ENST00000553514:c.*65C>T,ENST00000329559:c.*65C>T,ENST00000605997:c.*65C>T,ENST00000555441:c.*65C>T	NA	NA	NA	NA	14q32.12	NA	NA	NA	NA	rs13350	0.54	0.54	0.568	0.539137	0.334	0.8552	0.379	0.5492	0.5245	0.34	0.87	0.35	0.6	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.04852	NA	NA	0.339095	0.50578	NA	0.486	NA	3.6602384
1286	1	200960915	200960915	T	C	intronic	KIF21B	NA	NA	NA	intronic	ENSG00000116852	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs12142447	0.26	0.26	0.254	0.263778	0.1541	0.2976	0.2032	0.4531	0.1288	0.16	0.32	0.17	0.41	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.772515	NA	NA	0.185732	0.455202	NA	0.181	NA	3.660168
1286	15	88726586	88726586	G	A	intronic	NTRK3	NA	NA	NA	intronic	ENSG00000140538	NA	NA	NA	NA	NA	15q25.3	NA	NA	NA	NA	rs55725904	0.19	0.19	0.178	0.217652	0.166	0.1498	0.2046	0.2519	0.3037	0.18	0.17	0.22	0.2	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.918078	NA	NA	0.173899	0.22971	NA	0.181	NA	3.660101
1286	4	82369494	82369494	G	T	intronic	RASGEF1B	NA	NA	NA	intronic	ENSG00000138670	NA	NA	NA	NA	NA	4q21.21	NA	NA	NA	NA	rs28409763	0.4	0.4	0.42	0.435104	0.34	0.2252	0.2349	0.8003	0.3978	0.35	0.2	0.25	0.8	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.914309	NA	NA	NA	NA	NA	0.464	NA	3.66
1286	19	13006685	13006685	T	C	intronic	GCDH	NA	NA	NA	intronic	ENSG00000105607	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs2238641	0.27	0.27	0.231	0.279752	0.34	0.1438	0.4481	0.2587	0.2669	0.31	0.13	0.41	0.24	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.804566	NA	NA	NA	NA	NA	NA	NA	3.66
1286	20	3175742	3175742	A	G	intronic	DDRGK1	NA	NA	NA	intronic	ENSG00000198171	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs2295551	0.34	0.34	0.324	0.366014	0.34	0.4008	0.3069	0.3079	0.4775	0.35	0.37	0.33	0.29	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.633687	NA	NA	NA	NA	NA	0.362	NA	3.66
1286	1	24784214	24784214	G	A	intronic	NIPAL3	NA	NA	NA	intronic	ENSG00000001461	NA	NA	NA	NA	NA	1p36.11	NA	NA	NA	NA	rs41268761	0.08	0.08	0.063	0.0634984	0.1233	0.005	0.0821	0.0545	0.0613	0.14	0.0017	0.09	0.05	0.0956	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.627798	NA	NA	0.121296	0.058219	NA	0.022	NA	3.659804
1286	17	19835112	19835112	C	T	intronic	AKAP10	NA	NA	NA	intronic	ENSG00000108599	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs61749865	0.08	0.08	0.069	0.0802716	0.1123	0.0794	0.1239	0.0182	0.1012	0.11	0.07	0.1	0.02	0.1042	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.473872	NA	NA	0.123953	0.040853	NA	0.123	NA	3.659547
1286	1	151825991	151825991	G	T	exonic	THEM5	NA	synonymous SNV	THEM5:NM_182578:exon1:c.C51A:p.G17G	exonic	ENSG00000196407	NA	synonymous SNV	ENSG00000196407:ENST00000368817:exon1:c.C51A:p.G17G	NA	NA	1q21.3	NA	NA	NA	NA	rs7556386	0.67	0.67	0.635	0.626597	0.6859	0.6567	0.562	0.7421	0.4243	0.71	0.64	0.6	0.7	0.6443	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.036221	NA	NA	0.676977	0.721289	NA	0.717	NA	3.6594896
1286	17	65191647	65191647	T	G	intronic	HELZ	NA	NA	NA	intronic	ENSG00000198265	NA	NA	NA	NA	NA	17q24.2	NA	NA	NA	NA	rs3213753	0.19	0.19	0.175	0.196086	0.1769	0.1984	0.1614	0.2511	0.1636	0.18	0.19	0.14	0.22	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.772686	NA	NA	0.163734	0.24422	NA	0.188	NA	3.659366
1286	19	312311	312311	G	C	intronic	MIER2	NA	NA	NA	intronic	ENSG00000105556	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs60199290	0.21	0.21	0.197	0.217452	0.1272	0.0278	0.232	0.5363	0.0644	0.13	0.04	0.22	0.52	0.1427	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.045365	NA	NA	0.070963	0.404448	NA	0.109	NA	3.659137
1286	2	96955480	96955480	T	C	intronic	SNRNP200	NA	NA	NA	intronic	ENSG00000144028	NA	NA	NA	NA	NA	2q11.2	NA	NA	NA	NA	rs3214058	0.3	0.3	0.306	0.384984	0.341	0.2599	0.3271	0.2844	0.7362	0.34	0.24	0.32	0.27	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.488103	NA	NA	NA	NA	NA	0.232	NA	3.659
1286	4	39271541	39271541	A	G	intronic	WDR19	NA	NA	NA	intronic	ENSG00000157796	NA	NA	NA	NA	NA	4p14	NA	NA	NA	NA	rs3733280	0.27	0.27	0.268	0.278554	0.341	0.2629	0.2392	0.2678	0.273	0.33	0.22	0.23	0.28	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.170568	NA	NA	NA	NA	NA	0.312	NA	3.659
1286	4	88957562	88957562	T	C	intronic	PKD2	NA	NA	NA	intronic	ENSG00000118762	NA	NA	NA	NA	NA	4q22.1	NA	NA	NA	NA	rs17786456	0.17	0.17	0.161	0.143371	0.341	NA	0.1729	0.0961	0.1309	0.35	NA	0.21	0.07	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.674606	NA	NA	NA	NA	NA	0.239	NA	3.659
1286	12	117662712	117662712	G	A	intronic	NOS1	NA	NA	NA	intronic	ENSG00000089250	NA	NA	NA	NA	NA	12q24.22	NA	NA	NA	NA	rs2293046	0.51	0.51	0.55	0.540535	0.341	0.4792	0.5994	0.7791	0.4448	0.34	0.45	0.56	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.303464	NA	NA	NA	NA	NA	0.601	NA	3.659
1286	16	31339625	31339625	G	A	intronic	ITGAM	NA	NA	NA	intronic	ENSG00000169896	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs28372932	0.39	0.39	0.364	0.289936	0.341	0.6567	0.3199	0.0817	0.1196	0.34	0.72	0.36	0.08	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.315108	NA	NA	NA	NA	NA	0.341	NA	3.659
1286	17	4722606	4722606	G	A	intronic	PLD2	NA	NA	NA	intronic	ENSG00000129219	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs3764899	0.43	0.43	0.411	0.442891	0.341	0.7133	0.4222	0.2716	0.5153	0.33	0.7	0.37	0.3	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.309639	NA	NA	NA	NA	NA	0.304	NA	3.659
1286	17	74684124	74684124	T	G	intronic	MXRA7	NA	NA	NA	intronic	ENSG00000182534	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs2286588	0.28	0.28	0.216	0.26278	0.341	0.1498	0.3674	0.2118	0.2935	0.35	0.15	0.4	0.23	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.588212	NA	NA	NA	NA	NA	0.239	NA	3.659
1286	22	20838436	20838436	T	C	intronic	KLHL22	NA	NA	NA	intronic	ENSG00000099910	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs5749808	0.36	0.36	0.339	0.3127	0.341	0.4613	0.2334	0.2632	0.2536	0.34	0.49	0.29	0.28	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.588918	NA	NA	NA	NA	NA	0.203	NA	3.659
1286	6	167116160	167116160	C	T	intronic	RPS6KA2	NA	NA	NA	ncRNA_exonic	ENSG00000235008	NA	NA	NA	NA	NA	6q27	NA	NA	NA	NA	rs3817828	0.61	0.61	0.599	0.607827	0.675	0.7946	0.6599	0.2247	0.8272	0.69	0.78	0.63	0.27	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.600654	NA	NA	NA	NA	NA	0.645	NA	3.6583333
1286	2	96966661	96966661	G	C	intronic	SNRNP200	NA	NA	NA	intronic	ENSG00000144028	NA	NA	NA	NA	NA	2q11.2	NA	NA	NA	NA	rs3731930	0.29	0.29	0.293	0.381589	0.3419	0.2798	0.3242	0.2564	0.7372	0.34	0.26	0.32	0.23	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.029275	NA	NA	NA	NA	ID=COSN166204;OCCURENCE=1(breast)	0.217	NA	3.6581
1286	8	17920567	17920567	C	T	intronic	ASAH1	NA	NA	NA	intronic	ENSG00000104763	NA	NA	NA	NA	NA	8p22	NA	NA	NA	NA	rs7387930	0.36	0.36	0.277	0.374201	0.3419	0.376	0.4914	0.2383	0.5061	0.33	0.36	0.52	0.27	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.728721	NA	NA	NA	NA	NA	0.297	NA	3.6581
1286	10	29818827	29818827	C	T	intronic	SVIL	NA	NA	NA	intronic	ENSG00000197321	NA	NA	NA	NA	NA	10p11.23	NA	NA	NA	NA	rs3780843	0.27	0.27	0.262	0.261382	0.3419	0.0754	0.3127	0.32	0.2546	0.35	0.09	0.33	0.31	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.409156	NA	NA	NA	NA	NA	0.312	NA	3.6581
1286	16	25264440	25264440	T	C	intronic	ZKSCAN2	NA	NA	NA	intronic	ENSG00000155592	NA	NA	NA	NA	NA	16p12.1	NA	NA	NA	NA	rs11643089	0.42	0.42	0.426	0.446286	0.3419	0.4593	0.4308	0.5817	0.3681	0.34	0.44	0.4	0.55	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.481552	NA	NA	NA	NA	NA	0.42	NA	3.6581
1286	19	17186136	17186136	C	A	intronic	HAUS8	NA	NA	NA	intronic	ENSG00000131351	NA	NA	NA	NA	NA	19p13.11	NA	Name=HA-E2F1,Pol2-4H8,KAP1,YY1,Pol2(b),TBP,Nrf1,ZBTB7A_(SC-34508),HEY1,NFKB,TAF7_(SQ-8),YY1_(C-20),E2F6,NRSF,Pol2,TCF4,POU2F2,E2F4,E2F6_(H-50),TAF1,Oct-2	NA	NA	rs2305751	0.67	0.67	0.611	0.715056	0.6491	0.5109	0.8084	0.8132	0.7945	0.66	0.51	0.77	0.8	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.691001	NA	NA	0.69296	0.815029	NA	0.71	NA	3.65794
1286	1	146397489	146397489	G	T	intronic	NBPF10	NA	NA	NA	intronic	ENSG00000186275	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs71271428	0.16	0.16	NA	0.162939	0.169	0.1865	0.3271	0.056	0.1605	0.15	0.17	0.28	0.06	0.1732	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.795123	NA	NA	NA	NA	NA	NA	NA	3.6578
1286	19	50386340	50386340	T	C	intronic	TBC1D17	NA	NA	NA	intronic	ENSG00000104946	NA	NA	NA	NA	NA	19q13.33	NA	Name=KAP1	NA	NA	rs746738	0.48	0.48	0.458	0.54353	0.4245	0.4266	0.4899	0.6762	0.6452	0.42	0.41	0.49	0.63	0.4872	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.947399	NA	NA	0.430565	0.651976	NA	0.355	NA	3.657735
1286	6	117252672	117252672	C	A	UTR3	RFX6	NM_173560:c.*3C>A	NA	NA	UTR3	ENSG00000185002	ENST00000332958:c.*3C>A	NA	NA	NA	NA	6q22.1	NA	NA	NA	NA	rs631089	0.3	0.3	0.293	0.339058	0.2286	0.4226	0.2896	0.2905	0.4673	0.23	0.41	0.27	0.29	0.2698	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.252836	NA	NA	0.177251	0.276441	NA	0.319	NA	3.6576824
1286	9	113445108	113445108	A	T	intronic	MUSK	NA	NA	NA	intronic	ENSG00000030304	NA	NA	NA	NA	NA	9q31.3	NA	NA	NA	NA	rs75001517	0.07	0.07	0.05	0.0551118	0.1322	0.0069	0.0692	0.0393	0.0368	0.14	0.01	0.08	0.03	0.1046	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.821538	NA	NA	0.105724	0.035815	NA	0.065	NA	3.657476
1286	17	12901688	12901688	G	A	intronic	ELAC2	NA	NA	NA	intronic	ENSG00000006744	NA	NA	NA	NA	NA	17p12	NA	NA	NA	NA	rs56405144	0.05	0.05	0.068	0.0495208	0.1203	0.001	0.0764	0.0053	0.0675	0.12	NA	0.07	0.01	0.0975	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.962789	NA	NA	0.124884	0.022696	NA	0.058	NA	3.657316
1286	5	141049407	141049407	G	A	intronic	ARAP3	NA	NA	NA	intronic	ENSG00000120318	NA	NA	NA	NA	NA	5q31.3	NA	Name=ZNF263,CTCF	NA	NA	rs3763120	0.43	0.43	0.386	0.421126	0.4463	0.4395	0.4957	0.3268	0.4509	0.45	0.45	0.52	0.33	0.452	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.261906	NA	NA	0.444419	0.345665	ID=COSN167573;OCCURENCE=1(large_intestine)	0.348	NA	3.657281
1286	6	7845244	7845244	C	T	intronic	BMP6	NA	NA	NA	intronic	ENSG00000153162	NA	NA	NA	NA	NA	6p24.3	NA	NA	NA	NA	rs267192	0.46	0.46	0.437	0.459465	0.3429	0.7312	0.5331	0.3071	0.453	0.35	0.72	0.5	0.31	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.734899	NA	NA	NA	NA	NA	0.558	NA	3.6571
1286	9	112225774	112225774	T	C	intronic	PTPN3	NA	NA	NA	intronic	ENSG00000070159	NA	NA	NA	NA	NA	9q31.3	NA	NA	NA	NA	rs2274786	0.37	0.37	0.387	0.397564	0.3429	0.3462	0.2997	0.4887	0.453	0.35	0.35	0.33	0.46	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.106367	NA	NA	NA	NA	NA	0.406	NA	3.6571
1286	9	112225832	112225832	C	G	intronic	PTPN3	NA	NA	NA	intronic	ENSG00000070159	NA	NA	NA	NA	NA	9q31.3	NA	NA	NA	NA	rs3808877	0.38	0.38	0.398	0.407748	0.3429	0.3462	0.3084	0.5242	0.4509	0.35	0.35	0.34	0.5	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.001925	NA	NA	NA	NA	NA	0.42	NA	3.6571
1286	14	23882186	23882186	T	G	intronic	MYH7	NA	NA	NA	intronic	ENSG00000092054	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs7149517	0.34	0.34	0.344	0.351038	0.3429	0.0843	0.245	0.7065	0.229	0.33	0.07	0.29	0.7	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.426766	NA	NA	NA	NA	NA	0.464	NA	3.6571
1286	14	23885997	23885997	G	A	intronic	MYH7	NA	NA	NA	intronic	ENSG00000092054	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs3729828	0.34	0.34	0.348	0.349641	0.3429	0.0952	0.2392	0.7095	0.2106	0.32	0.08	0.28	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.08051	NA	NA	NA	NA	NA	0.464	NA	3.6571
1286	3	154802920	154802920	T	C	intronic	MME	NA	NA	NA	intronic	ENSG00000196549	NA	NA	NA	NA	NA	3q25.2	NA	NA	NA	NA	rs4607069	0.08	0.08	0.067	0.109625	0.1153	0.0992	0.085	0.0696	0.1861	0.1	0.07	0.09	0.08	0.1199	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.833876	NA	NA	0.107723	0.075207	NA	0.058	NA	3.657077
1286	1	9009547	9009547	C	A	intronic	CA6	NA	NA	NA	intronic	ENSG00000131686	NA	NA	NA	NA	NA	1p36.23	NA	NA	NA	NA	rs2274331	0.14	0.14	0.161	0.153554	0.1203	0.1637	0.0749	0.2005	0.1697	0.12	0.17	0.08	0.18	0.1155	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.964274	NA	NA	0.107492	0.184294	NA	0.123	NA	3.656708
1286	2	231065722	231065722	A	T	intronic	SP110	NA	NA	NA	intronic	ENSG00000135899	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs41309108	0.16	0.16	0.157	0.204872	0.1004	0.2093	0.0749	0.2746	0.3057	0.11	0.21	0.1	0.24	0.1407	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.228413	NA	NA	0.102209	0.251702	ID=COSN166426;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.152	NA	3.656691
1286	12	21665207	21665207	A	G	intronic	GOLT1B	NA	NA	NA	intronic	ENSG00000111711	NA	NA	NA	NA	NA	12p12.1	NA	NA	NA	NA	rs61926342	0.05	0.05	0.041	0.0511182	0.1173	0.0069	0.0836	0.0038	0.0695	0.1	0.0035	0.09	0.0041	0.0986	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.727998	NA	NA	0.127558	0.021562	NA	0.101	NA	3.656542
1286	10	113913222	113913222	T	C	UTR3	GPAM	NM_020918:c.*86A>G,NM_001244949:c.*86A>G	NA	NA	UTR3	ENSG00000119927	ENST00000348367:c.*86A>G,ENST00000423155:c.*86A>G	NA	NA	NA	NA	10q25.2	NA	NA	NA	NA	rs2297991	0.7	0.7	0.699	0.730631	0.6769	0.7579	0.647	0.6936	0.8671	0.67	0.73	0.66	0.73	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.440509	2.440509	NA	NA	NA	NA	0.623	NA	3.6564334
1286	17	12917856	12917856	G	A	intronic	ELAC2	NA	NA	NA	intronic	ENSG00000006744	NA	NA	NA	NA	NA	17p12	NA	NA	NA	NA	rs56004910	0.05	0.05	0.068	0.0495208	0.1203	0.001	0.0764	0.0053	0.0675	0.11	NA	0.07	0.01	0.0978	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.045228	NA	NA	0.125581	0.022696	NA	0.058	NA	3.656319
1286	4	69181942	69181942	G	A	intronic	YTHDC1	NA	NA	NA	UTR3	ENSG00000083896	ENST00000507529:c.*39C>T	NA	NA	NA	NA	4q13.2	NA	NA	NA	NA	rs12649108	0.29	0.29	0.273	0.2498	0.2555	0.5407	0.1772	0.087	0.2157	0.28	0.54	0.19	0.09	0.2549	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.562655	NA	NA	NA	NA	NA	0.232	NA	3.6562667
1286	1	149089962	149089962	A	C	intergenic	LOC645166,LOC388692	dist=136908;dist=189514	NA	NA	ncRNA_exonic	ENSG00000179571	NA	NA	NA	NA	NA	1q21.2	NA	NA	NA	NA	rs1849365	0.47	0.47	0.458	0.522165	0.3439	0.6429	0.5202	0.4569	0.6708	0.34	0.64	0.48	0.45	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.372627	NA	NA	NA	NA	NA	0.435	NA	3.6561
1286	10	3147501	3147501	C	T	intronic	PFKP	NA	NA	NA	intronic	ENSG00000067057	NA	NA	NA	NA	NA	10p15.2	NA	NA	NA	NA	rs4881081	0.33	0.33	0.332	0.333267	0.3439	0.1637	0.4092	0.3911	0.365	0.34	0.17	0.46	0.42	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.547754	NA	NA	NA	NA	NA	0.312	NA	3.6561
1286	15	34030887	34030887	A	G	intronic	RYR3	NA	NA	NA	intronic	ENSG00000198838	NA	NA	NA	NA	NA	15q14	NA	NA	NA	NA	rs12907197	0.41	0.41	0.419	0.427516	0.3439	0.4623	0.2911	0.466	0.5225	0.33	0.49	0.34	0.51	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.119426	NA	NA	NA	NA	NA	0.362	NA	3.6561
1286	19	43860053	43860053	G	A	intronic	CD177	NA	NA	NA	intronic	ENSG00000204936	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs10408630	0.38	0.38	0.405	0.358027	0.3439	0.1984	0.3285	0.6634	0.1452	0.32	0.23	0.34	0.67	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.185669	NA	NA	NA	NA	NA	0.261	NA	3.6561
1286	19	57678738	57678738	A	G	intronic	DUXA	NA	NA	NA	intronic	ENSG00000258873	NA	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs17273610	0.1	0.1	0.099	0.124601	0.1074	0.1597	0.1182	0.0923	0.1544	0.11	0.13	0.09	0.08	0.115	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.354178	NA	NA	0.121512	0.085338	NA	0.196	NA	3.656088
1286	5	33624496	33624496	G	A	intronic	ADAMTS12	NA	NA	NA	intronic	ENSG00000151388	NA	NA	NA	NA	NA	5p13.3	NA	NA	NA	NA	rs34333679	0.1	0.1	0.095	0.0858626	0.1352	0.002	0.0893	0.1475	0.0358	0.13	0.0017	0.12	0.16	0.0961	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.590582	NA	NA	0.113023	0.145937	NA	0.072	NA	3.655677
1286	19	54722594	54722594	T	C	intronic	LILRB3	NA	NA	NA	intronic	ENSG00000170889,ENSG00000204577,ENSG00000244482	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs3852891	0.09	0.09	0.12	0.14397	0.1103	0.002	0.134	0.3389	0.0685	0.07	NA	0.1	0.24	0.1166	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.757609	NA	NA	0.117442	0.300045	NA	NA	NA	3.655658
1286	19	54722595	54722595	G	A	intronic	LILRB3	NA	NA	NA	intronic	ENSG00000170889,ENSG00000204577,ENSG00000244482	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs3852892	0.1	0.1	0.109	0.14397	0.1103	0.002	0.134	0.3389	0.0685	0.07	NA	0.1	0.24	0.1165	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.159496	NA	NA	0.117791	0.300045	NA	NA	NA	3.655409
1286	15	73581444	73581444	A	G	intronic	NEO1	NA	NA	NA	intronic	ENSG00000067141	NA	NA	NA	NA	NA	15q24.1	NA	NA	Name=4	NA	rs489531	0.47	0.47	0.454	0.45627	0.4682	0.5863	0.3919	0.382	0.456	0.48	0.62	0.38	0.34	0.4448	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.261823	NA	NA	0.431697	0.387398	NA	0.333	NA	3.655303
1286	1	54370264	54370264	A	T	intronic	DIO1	NA	NA	NA	intronic	ENSG00000211452	NA	NA	NA	NA	NA	1p32.3	NA	NA	NA	NA	rs2294511	0.37	0.37	0.341	0.374002	0.3449	0.245	0.5447	0.4266	0.3446	0.35	0.24	0.52	0.42	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.21649	NA	NA	NA	NA	NA	0.42	NA	3.6551
1286	9	140002754	140002754	C	T	intronic	MAN1B1	NA	NA	NA	intronic	ENSG00000177239	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs4880090	0.17	0.17	0.173	0.169928	0.3449	0.006	0.219	0.0356	0.3057	0.35	0.0017	0.25	0.05	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.348356	NA	NA	NA	NA	NA	0.283	NA	3.6551
1286	12	133768273	133768273	G	C	intronic	ZNF268	NA	NA	NA	intronic	ENSG00000090612,ENSG00000256825	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs10870589	0.29	0.29	0.298	0.296326	0.3449	0.1121	0.2565	0.447	0.2607	0.35	0.08	0.26	0.45	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.950421	NA	NA	NA	NA	NA	0.304	NA	3.6551
1286	14	90756503	90756503	G	A	intronic	NRDE2	NA	NA	NA	intronic	ENSG00000119720	NA	NA	NA	NA	NA	14q32.11	NA	NA	NA	NA	rs3742672	0.19	0.19	0.185	0.172324	0.3449	0.0675	0.2277	0.0287	0.2577	0.36	0.08	0.27	0.02	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.597237	NA	NA	NA	NA	NA	0.217	NA	3.6551
1286	14	92268531	92268531	C	T	intronic	TC2N	NA	NA	NA	intronic	ENSG00000165929	NA	NA	NA	NA	NA	14q32.12	NA	NA	NA	NA	rs10498631	0.29	0.29	0.265	0.278155	0.3449	0.3373	0.2997	0.1679	0.2822	0.35	0.3	0.31	0.18	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.526358	NA	NA	NA	NA	NA	0.232	NA	3.6551
1286	17	80443309	80443309	G	A	intronic	NARF	NA	NA	NA	intronic	ENSG00000141562	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs9890316	0.55	0.55	NA	0.567093	0.3449	0.9048	0.5605	0.5734	0.4438	0.32	0.88	0.54	0.53	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.009426	NA	NA	NA	NA	NA	0.051	NA	3.6551
1287	19	50375035	50375035	T	C	intronic	AKT1S1	NA	NA	NA	intronic	ENSG00000204673	NA	NA	NA	NA	NA	19q13.33	NA	NA	Name=4	NA	rs2290774	0.48	0.48	0.448	0.544329	0.4294	0.4246	0.4741	0.6967	0.6299	0.42	0.41	0.48	0.65	0.4846	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.866896	NA	NA	0.431047	0.663187	NA	0.362	NA	3.654953
1287	7	99972122	99972122	A	G	intronic	PILRA	NA	NA	NA	intronic	ENSG00000085514	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs7792525	0.1	0.1	0.091	0.103834	0.1759	0.0278	0.1023	0.1036	0.1094	0.18	0.02	0.1	0.08	0.1693	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.076518	NA	NA	NA	NA	NA	0.116	NA	3.6548
1287	22	51182485	51182485	A	G	intronic	ACR	NA	NA	NA	intronic	ENSG00000100312	NA	NA	NA	Score=251;Name=lod=14	NA	22q13.33	NA	NA	NA	NA	rs6009961	0.58	0.58	0.541	0.638379	0.6839	0.4018	0.6484	0.8979	0.4775	0.61	0.32	0.59	0.81	0.6613	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.972316	1.972316	NA	NA	NA	NA	0.703	NA	3.6548
1287	4	143158979	143158979	A	C	intronic	INPP4B	NA	NA	NA	intronic	ENSG00000109452	NA	NA	NA	NA	NA	4q31.21	NA	NA	NA	NA	rs28647625	0.08	0.08	0.076	0.0848642	0.1054	0.0188	0.085	0.1354	0.0634	0.09	0.02	0.1	0.1	0.132	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.649891	NA	NA	0.107985	0.107666	NA	0.072	NA	3.654615
1287	2	220353104	220353104	A	G	intronic	SPEG	NA	NA	NA	ncRNA_intronic	ENSG00000227432	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs875097	0.56	0.56	0.514	0.497604	0.6789	0.7679	0.5648	0.1112	0.5072	0.68	0.75	0.55	0.15	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.129941	NA	NA	NA	NA	NA	0.536	NA	3.6544333
1287	5	176765395	176765395	G	A	intronic	LMAN2	NA	NA	NA	intronic	ENSG00000169223	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs11748912	0.35	0.35	0.354	0.372804	0.3459	0.0764	0.3213	0.7231	0.2689	0.33	0.09	0.35	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.136688	NA	NA	NA	NA	NA	0.457	NA	3.6541
1287	4	144801671	144801671	A	C	intronic	GYPE	NA	NA	NA	intronic	ENSG00000197465	NA	NA	NA	NA	NA	4q31.21	NA	NA	NA	NA	rs71612487	0.26	0.26	0.163	NA	NA	NA	NA	NA	NA	0.32	0.3	0.35	0.07	0.346	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.082999	NA	NA	NA	NA	NA	0.007	NA	3.654
1287	17	27944089	27944089	C	T	intronic	CORO6	NA	NA	NA	ncRNA_intronic	ENSG00000264031	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs11657079	0.15	0.15	0.148	0.127196	0.2406	0.0228	0.1556	0.1346	0.0879	0.24	0.02	0.17	0.13	0.1965	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.088511	NA	0	0.242674	0.144803	NA	0.087	NA	3.6535593
1287	12	122839909	122839909	C	T	intronic	CLIP1	NA	NA	NA	intronic	ENSG00000130779	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs3817012	0.2	0.2	0.181	0.182308	0.1044	0.4494	0.1095	0.0272	0.2485	0.11	0.49	0.13	0.04	0.1392	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.909003	NA	NA	0.102907	0.037222	NA	0.094	NA	3.653493
1287	19	54756155	54756155	T	C	intronic	LILRB5	NA	NA	NA	intronic	ENSG00000105609	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs45446093	0.12	0.12	0.117	0.104433	0.1759	0.0129	0.1729	0.084	0.1043	0.17	0.01	0.21	0.1	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.756726	NA	NA	0.170647	0.108382	NA	0.101	NA	3.653453
1287	11	116720089	116720089	T	C	intronic	SIK3	NA	NA	NA	ncRNA_intronic	ENSG00000235910	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs2289893	0.56	0.56	0.544	0.538139	0.6799	0.3542	0.536	0.6248	0.4663	0.69	0.34	0.59	0.61	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.174641	NA	NA	NA	NA	NA	0.739	NA	3.6534333
1287	2	58392789	58392789	T	C	intronic	FANCL	NA	NA	NA	intronic	ENSG00000115392	NA	NA	NA	NA	NA	2p16.1	NA	NA	NA	NA	rs848288	0.26	0.26	0.216	0.276757	0.3469	0.2887	0.33	0.1104	0.3793	0.34	0.24	0.34	0.09	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.021011	NA	NA	NA	NA	NA	0.181	NA	3.6531
1287	5	23304772	23304772	T	C	intergenic	CDH12,PRDM9	dist=451041;dist=202952	NA	NA	ncRNA_exonic	ENSG00000250332	NA	NA	NA	NA	NA	5p14.2	NA	NA	NA	NA	rs10067319	0.42	0.42	0.395	0.508187	0.3469	0.2857	0.3833	0.8313	0.5552	0.33	0.27	0.36	0.78	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.096331	NA	NA	NA	NA	NA	0.478	NA	3.6531
1287	7	5754906	5754906	C	A	intronic	RNF216	NA	NA	NA	intronic	ENSG00000011275	NA	NA	NA	NA	NA	7p22.1	NA	NA	NA	NA	rs12539336	0.23	0.23	0.2	0.221845	0.3469	0.005	0.3847	0.1732	0.2669	0.35	0.0017	0.41	0.18	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.182584	NA	NA	NA	NA	NA	0.275	NA	3.6531
1287	9	77286876	77286876	A	C	intronic	RORB	NA	NA	NA	intronic	ENSG00000198963	NA	NA	NA	NA	NA	9q21.13	NA	NA	NA	NA	rs3818559	0.48	0.48	0.468	0.48722	0.3469	0.6696	0.3674	0.6483	0.3108	0.35	0.69	0.32	0.57	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.138786	NA	NA	NA	NA	NA	0.486	NA	3.6531
1287	18	690436	690436	C	T	intronic	ENOSF1	NA	NA	NA	intronic	ENSG00000132199	NA	NA	NA	NA	NA	18p11.32	NA	NA	NA	NA	rs2847614	0.26	0.26	0.253	0.250599	0.3469	0.0933	0.3487	0.2761	0.2096	0.34	0.08	0.33	0.29	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.856838	NA	NA	NA	NA	NA	0.319	NA	3.6531
1287	19	44977071	44977071	C	T	intergenic	ZNF229,ZNF180	dist=24406;dist=2788	NA	NA	ncRNA_exonic	ENSG00000176761	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs1897824	0.3	0.3	0.276	0.298323	0.3469	0.0724	0.2406	0.5666	0.1595	0.35	0.08	0.25	0.52	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.934724	NA	NA	NA	NA	NA	0.391	NA	3.6531
1287	20	37620888	37620888	G	C	intronic	DHX35	NA	NA	NA	intronic	ENSG00000101452	NA	NA	NA	NA	NA	20q12	NA	NA	NA	NA	rs4812348	0.35	0.35	0.362	0.354633	0.3469	0.4286	0.3674	0.3101	0.3374	0.36	0.36	0.35	0.35	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.830768	NA	NA	NA	NA	NA	0.29	NA	3.6531
1287	20	37630606	37630606	A	T	intronic	DHX35	NA	NA	NA	intronic	ENSG00000101452	NA	NA	NA	NA	NA	20q12	NA	NA	NA	NA	rs3764701	0.36	0.36	0.367	0.36262	0.3469	0.4276	0.3718	0.3389	0.3374	0.36	0.36	0.35	0.38	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.124731	NA	NA	NA	NA	NA	0.29	NA	3.6531
1287	22	26173484	26173484	G	A	intronic	MYO18B	NA	NA	NA	intronic	ENSG00000133454	NA	NA	NA	NA	NA	22q12.1	NA	NA	NA	NA	rs12170856	0.19	0.19	0.175	0.164337	0.3469	0.0079	0.2709	0.0711	0.1881	0.36	0.01	0.27	0.09	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.910057	NA	NA	NA	NA	NA	0.167	NA	3.6531
1287	7	38357075	38357075	T	C	intergenic	TARP,LOC100506776	dist=43827;dist=24103	NA	NA	exonic	ENSG00000211695	NA	nonsynonymous SNV	ENSG00000211695:ENST00000444775:exon1:c.A19G:p.T7A	NA	NA	7p14.1	NA	NA	NA	NA	rs11769443	0.42	0.42	0.419	0.418331	0.3718	0.3403	0.4438	0.5325	0.3742	0.39	0.34	0.4	0.57	0.446	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.93258	NA	0.88	0.362559	0.479187	NA	0.42	NA	3.6529744
1287	3	164724567	164724567	A	G	intronic	SI	NA	NA	NA	intronic	ENSG00000090402	NA	NA	NA	NA	NA	3q26.1	NA	NA	NA	NA	rs7618643	0.1	0.1	0.108	0.111621	0.1083	0.0645	0.072	0.1309	0.1656	0.09	0.07	0.09	0.15	0.1183	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.331634	NA	NA	0.120465	0.136178	NA	0.101	NA	3.652935
1287	3	164714296	164714296	C	T	intronic	SI	NA	NA	NA	intronic	ENSG00000090402	NA	NA	NA	NA	NA	3q26.1	NA	NA	NA	NA	rs78437999	0.1	0.1	0.112	0.113618	0.1083	0.0645	0.072	0.1369	0.1677	0.09	0.07	0.09	0.16	0.1183	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.478594	NA	NA	0.120489	0.149115	NA	0.101	NA	3.652911
1287	12	39705174	39705174	T	A	intronic	KIF21A	NA	NA	NA	intronic	ENSG00000139116	NA	NA	NA	NA	NA	12q12	NA	NA	NA	NA	rs952542	0.23	0.23	NA	0.303115	0.1451	0.3849	0.1614	0.3744	0.3855	0.14	0.33	0.16	0.3	0.202	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.089	NA	NA	NA	NA	NA	0.036	NA	3.6529
1287	2	211473070	211473070	G	T	intronic	CPS1	NA	NA	NA	intronic	ENSG00000021826	NA	NA	NA	NA	NA	2q34	NA	NA	NA	NA	rs2287600	0.14	0.14	0.124	0.136581	0.1133	0.2867	0.1427	0.0219	0.1564	0.11	0.29	0.13	0.02	0.1255	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.968123	NA	NA	0.108331	0.036087	NA	0.152	NA	3.652869
1287	12	118839867	118839867	G	A	intronic	SUDS3	NA	NA	NA	intronic	ENSG00000111707	NA	NA	NA	NA	NA	12q24.23	NA	NA	NA	NA	rs61943404	0.08	0.08	0.072	0.0650958	0.1819	0.006	0.0793	0.0189	0.0583	0.18	0.01	0.07	0.02	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.090803	NA	NA	0.165305	0.034682	NA	0.13	NA	3.652795
1287	3	111602828	111602828	G	A	intronic	PHLDB2	NA	NA	NA	UTR5	ENSG00000144824	ENST00000481953:c.-97G>A	NA	NA	NA	NA	3q13.2	NA	NA	NA	NA	rs6805359	0.53	0.53	0.504	0.542133	0.5139	0.7996	0.5101	0.32	0.6288	0.52	0.79	0.49	0.28	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.107684	NA	NA	NA	NA	NA	0.5	NA	3.6527667
1287	2	95614051	95614051	C	T	upstream	LOC442028	NA	NA	NA	upstream	ENSG00000259848	NA	NA	NA	NA	NA	2q11.1	NA	NA	NA	NA	rs148466674	0.01	0.01	0.003	0.00958466	0.0139	NA	0.0231	NA	0.0184	0.02	NA	0.01	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.362588	NA	NA	NA	NA	NA	NA	NA	3.6527666
1287	21	47418234	47418234	G	C	intronic	COL6A1	NA	NA	NA	intronic	ENSG00000142156	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs11700844	0.1	0.1	0.076	0.0754792	0.161	0.0089	0.1527	0.0242	0.0706	0.16	0.01	0.18	0.03	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.225772	NA	NA	0.186361	0.052746	NA	0.101	NA	3.652639
1287	19	54722209	54722209	T	C	intronic	LILRB3	NA	NA	NA	intronic	ENSG00000170889,ENSG00000204577,ENSG00000244482	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs58414108	0.13	0.13	0.118	0.147764	0.1103	0.002	0.1354	0.3525	0.0685	0.09	0.0035	0.11	0.35	0.1175	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.83265	NA	NA	0.119651	0.310259	NA	0.051	NA	3.652549
1287	19	9204307	9204307	A	G	exonic	OR1M1	NA	synonymous SNV	OR1M1:NM_001004456:exon1:c.A387G:p.P129P	exonic	ENSG00000170929	NA	synonymous SNV	ENSG00000170929:ENST00000429566:exon1:c.A387G:p.P129P	NA	NA	19p13.2	NA	NA	NA	NA	rs4804097	0.71	0.71	0.737	0.717452	0.6869	0.8899	0.5807	0.6694	0.7331	0.67	0.91	0.57	0.66	0.6769	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.678485	NA	NA	0.650465	0.650704	NA	0.688	NA	3.6524016
1287	12	111733274	111733274	C	T	intronic	CUX2	NA	NA	NA	intronic	ENSG00000111249	NA	NA	NA	NA	NA	12q24.12	NA	NA	NA	NA	rs2301658	0.37	0.37	0.391	0.365815	0.1849	0.6746	0.1657	0.3828	0.3528	0.19	0.71	0.21	0.39	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.716854	NA	NA	0.162791	0.383671	NA	0.275	NA	3.652309
1287	17	12916606	12916606	A	G	intronic	ELAC2	NA	NA	NA	intronic	ENSG00000006744	NA	NA	NA	NA	NA	17p12	NA	NA	NA	NA	rs74556312	0.05	0.05	0.057	0.0495208	0.1203	0.001	0.0764	0.0053	0.0675	0.11	NA	0.07	0.01	0.1017	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.653322	NA	NA	0.125698	0.022696	NA	0.058	NA	3.652302
1287	3	133476852	133476852	C	T	intronic	TF	NA	NA	NA	intronic	ENSG00000091513	NA	NA	NA	NA	NA	3q22.1	NA	NA	NA	NA	rs3811658	0.33	0.33	0.305	0.321685	0.3479	0.4286	0.3905	0.118	0.411	0.35	0.45	0.35	0.13	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.611582	NA	NA	NA	NA	NA	0.254	NA	3.6521
1287	6	7516833	7516833	G	T	intergenic	RIOK1,DSP	dist=98563;dist=25037	NA	NA	ncRNA_exonic	ENSG00000234115	NA	NA	NA	NA	NA	6p24.3	NA	NA	NA	NA	rs2798161	0.28	0.28	0.246	0.273163	0.3479	0.1815	0.3588	0.1641	0.3773	0.36	0.21	0.37	0.16	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.200841	NA	NA	NA	NA	NA	0.188	NA	3.6521
1287	6	54013765	54013765	A	G	intronic	MLIP	NA	NA	NA	intronic	ENSG00000146147	NA	NA	NA	NA	NA	6p12.1	NA	NA	NA	NA	rs2145755	0.45	0.45	0.435	0.447085	0.3479	0.2976	0.4928	0.7352	0.2812	0.34	0.32	0.48	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.197651	NA	NA	NA	NA	NA	0.413	NA	3.6521
1287	8	6372112	6372112	G	A	intronic	ANGPT2,MCPH1	NA	NA	NA	intronic	ENSG00000091879,ENSG00000147316	NA	NA	NA	NA	NA	8p23.1	NA	NA	NA	NA	rs2916735	0.18	0.18	0.154	0.150958	0.3479	0.0496	0.2118	0.0129	0.1963	0.34	0.05	0.25	0.02	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.075643	NA	NA	NA	NA	NA	0.159	NA	3.6521
1287	10	100152055	100152055	C	G	intronic	PYROXD2	NA	NA	NA	intronic	ENSG00000119943	NA	NA	NA	NA	NA	10q24.2	NA	NA	NA	NA	rs6584191	0.56	0.56	0.541	0.599042	0.3479	0.5843	0.5418	0.8729	0.5429	0.35	0.59	0.51	0.87	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.230255	NA	NA	NA	NA	NA	0.486	NA	3.6521
1287	11	4153407	4153407	C	T	intronic	RRM1	NA	NA	NA	intronic	ENSG00000167325	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs4910890	0.23	0.23	0.209	0.265176	0.3479	0.2946	0.3069	0.0318	0.4356	0.33	0.25	0.26	0.03	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.470834	NA	NA	NA	NA	NA	NA	NA	3.6521
1287	11	124677969	124677969	G	C	intergenic	MSANTD2,ROBO3	dist=7670;dist=57336	NA	NA	ncRNA_exonic	ENSG00000254941	NA	NA	NA	NA	NA	11q24.2	NA	NA	NA	NA	rs580213	0.31	0.31	0.303	0.338059	0.3479	0.3065	0.2176	0.3548	0.4233	0.34	0.28	0.23	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.3519	1.3519	NA	NA	NA	NA	0.225	NA	3.6521
1287	14	78199019	78199019	T	A	intronic	SNW1	NA	NA	NA	intronic	ENSG00000100603,ENSG00000119705	NA	NA	NA	NA	NA	14q24.3	NA	NA	NA	NA	rs12587825	0.37	0.37	0.313	0.358027	0.3479	0.5089	0.5245	0.1097	0.4305	0.36	0.51	0.51	0.11	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.181043	NA	NA	NA	NA	NA	0.203	NA	3.6521
1287	21	41142775	41142775	A	G	intronic	IGSF5	NA	NA	NA	intronic	ENSG00000183067	NA	NA	NA	NA	NA	21q22.2	NA	NA	NA	NA	rs73217279	0.27	0.27	0.223	0.254593	0.3479	0.2609	0.2104	0.1891	0.272	0.33	0.28	0.24	0.17	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.631969	NA	NA	NA	NA	ID=COSN166655;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.246	NA	3.6521
1287	2	234839404	234839404	C	T	intronic	TRPM8	NA	NA	NA	intronic	ENSG00000144481	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs4663987	0.2	0.2	0.181	0.233227	0.0895	0.0893	0.1888	0.4864	0.2188	0.09	0.09	0.17	0.49	0.1583	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.931142	NA	NA	0.100116	0.44916	NA	0.196	NA	3.652084
1287	2	234386018	234386018	A	G	UTR3	USP40	NM_018218:c.*20T>C	NA	NA	UTR3	ENSG00000085982	ENST00000450966:c.*20T>C,ENST00000251722:c.*20T>C	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs2971862	0.24	0.24	0.241	0.25639	0.2465	0.1438	0.1542	0.5053	0.1186	0.23	0.12	0.15	0.47	0.2235	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.190258	NA	NA	0.211681	0.421914	NA	0.225	NA	3.6516524
1287	19	8402642	8402642	C	T	intronic	KANK3	NA	NA	NA	intronic	ENSG00000186994	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs737228	0.12	0.12	0.121	0.128994	0.1163	0.0327	0.1225	0.2383	0.0982	0.11	0.03	0.14	0.22	0.1194	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.688707	NA	NA	0.112791	0.208125	NA	0.13	NA	3.651509
1287	15	75114374	75114374	C	G	intronic	LMAN1L	NA	NA	NA	ncRNA_intronic	ENSG00000261606	NA	NA	NA	NA	NA	15q24.1	NA	NA	NA	NA	rs11072509	0.61	0.61	0.591	0.61262	0.6819	0.631	0.4928	0.5635	0.6738	0.69	0.57	0.56	0.57	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.451871	NA	NA	NA	NA	NA	0.601	NA	3.6514333
1287	16	30393771	30393771	G	A	intronic	SEPT1,ZNF48	NA	NA	NA	intronic	ENSG00000180035,ENSG00000180096,ENSG00000270466	NA	NA	NA	NA	NA	16p11.2	NA	Name=NFKB,Pol2,YY1_(C-20)	NA	NA	rs4788409	0.78	0.78	0.762	0.772963	0.673	0.9127	0.7767	0.7685	0.7352	0.69	0.91	0.78	0.75	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.494852	NA	NA	0.675676	0.741329	NA	0.703	NA	3.651324
1287	4	82092967	82092967	C	T	intronic	PRKG2	NA	NA	NA	ncRNA_intronic	ENSG00000251059	NA	NA	NA	NA	NA	4q21.21	NA	NA	NA	NA	rs9992933	0.43	0.43	0.451	0.469848	0.1889	0.5556	0.304	0.7595	0.3967	0.18	0.53	0.33	0.77	0.2906	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.887463	NA	NA	0.202674	0.646845	NA	0.486	NA	3.6511593
1287	8	59498685	59498685	T	G	intronic	NSMAF	NA	NA	NA	intronic	ENSG00000035681	NA	NA	NA	NA	NA	8q12.1	NA	NA	NA	NA	rs12679938	0.21	0.21	0.192	0.221046	0.3489	0.256	0.1801	0.0514	0.3119	0.33	0.2	0.22	0.06	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.567521	NA	NA	NA	NA	NA	0.159	NA	3.6511
1287	8	138710637	138710637	C	A	intergenic	NONE,FAM135B	dist=NONE;dist=431629	NA	NA	ncRNA_exonic	ENSG00000254076	NA	NA	NA	NA	NA	8q24.23	NA	NA	NA	NA	rs10481397	0.3	0.3	0.262	0.305112	0.3489	0.3433	0.3516	0.0772	0.4959	0.36	0.36	0.34	0.11	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.755164	NA	NA	NA	NA	NA	0.341	NA	3.6511
1287	9	115946500	115946500	A	G	intronic	FKBP15	NA	NA	NA	intronic	ENSG00000119321	NA	NA	NA	NA	NA	9q32	NA	NA	NA	NA	rs10817454	0.3	0.3	0.303	0.29972	0.3489	0.1617	0.2997	0.3949	0.2628	0.35	0.18	0.3	0.36	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.219349	NA	NA	NA	NA	NA	0.297	NA	3.6511
1287	10	5960209	5960209	C	T	intronic	FBXO18	NA	NA	NA	intronic	ENSG00000134452	NA	NA	NA	NA	NA	10p15.1	NA	NA	NA	NA	rs2387092	0.23	0.23	0.238	0.188299	0.3489	0.0317	0.2075	0.2254	0.1207	0.36	0.02	0.27	0.23	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.244828	NA	NA	NA	NA	NA	0.268	NA	3.6511
1287	11	4153408	4153408	A	G	intronic	RRM1	NA	NA	NA	intronic	ENSG00000167325	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs4910891	0.22	0.22	0.209	0.265575	0.3489	0.2946	0.3069	0.0318	0.4366	0.31	0.24	0.25	0.03	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.754828	NA	NA	NA	NA	NA	NA	NA	3.6511
1287	21	38517021	38517021	G	A	intronic	TTC3	NA	NA	NA	intronic	ENSG00000182670	NA	NA	NA	NA	NA	21q22.13	NA	NA	NA	NA	rs1344047	0.35	0.35	0.349	0.373602	0.3489	0.5228	0.2637	0.202	0.5552	0.34	0.53	0.27	0.21	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.570299	NA	NA	NA	NA	NA	0.355	NA	3.6511
1287	12	69153071	69153071	C	G	intronic	SLC35E3	NA	NA	NA	intronic	ENSG00000175782	NA	NA	NA	NA	NA	12q15	NA	NA	NA	NA	rs12316701	0.13	0.13	0.114	0.120008	0.1233	0.2123	0.0994	0.0507	0.1299	0.13	0.23	0.1	0.05	0.117	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.122045	NA	NA	0.108852	0.060336	NA	0.138	NA	3.650848
1287	12	52658039	52658039	C	G	intergenic	KRT7,KRT81	dist=15330;dist=21658	NA	NA	intronic	ENSG00000170442	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs150461771	0.01	0.01	0.007	0.00638978	0.0159	NA	0.0058	0.0015	0.0102	0.02	NA	0.01	0.002	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.192778	NA	NA	NA	NA	NA	NA	NA	3.6507667
1287	8	22385061	22385061	T	C	intronic	PPP3CC	NA	NA	NA	intronic	ENSG00000120910	NA	NA	NA	NA	NA	8p21.3	NA	NA	NA	NA	rs17733133	0.06	0.06	0.061	0.0682907	0.1213	0.003	0.0576	0.0091	0.1687	0.14	0.0017	0.06	0.01	0.1083	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.734922	NA	NA	0.119651	0.029732	NA	0.043	NA	3.650749
1287	3	124369637	124369637	G	A	intronic	KALRN	NA	NA	NA	intronic	ENSG00000160145	NA	NA	NA	NA	NA	3q21.2	NA	NA	NA	NA	rs71323878	0.21	0.21	NA	0.190495	0.1272	0.3542	0.2406	0.1362	0.1247	0.13	0.36	0.2	0.15	0.2221	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.076304	NA	NA	NA	NA	NA	0.246	NA	3.6507
1287	14	22392304	22392304	G	A	intergenic	OR4E2,DAD1	dist=258066;dist=641503	NA	NA	UTR5	ENSG00000211792	ENST00000390440:c.-10G>A	NA	NA	NA	NA	14q11.2	NA	Name=c-Fos	NA	NA	rs34365759	0.48	0.48	0.488	0.465655	0.3956	0.504	0.513	0.5091	0.4059	0.41	0.55	0.46	0.51	0.4201	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.661856	NA	NA	0.367082	0.420207	NA	0.478	NA	3.6505514
1287	6	39046201	39046201	A	G	intronic	GLP1R	NA	NA	NA	intronic	ENSG00000112164	NA	NA	NA	NA	NA	6p21.2	NA	NA	NA	NA	rs761387	0.16	0.16	NA	0.153355	0.1193	0.2054	0.232	0.0915	0.1626	0.12	0.22	0.22	0.11	0.1374	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.792825	NA	NA	0.092791	0.098956	NA	0.145	NA	3.650509
1287	7	107262558	107262558	T	A	UTR3	BCAP29	NM_018844:c.*3750T>A,NM_001008405:c.*3508T>A	NA	NA	UTR3	ENSG00000075790	ENST00000379119:c.*3508T>A	NA	NA	NA	NA	7q22.3	NA	NA	NA	NA	rs2894475	0.71	0.71	0.728	0.741414	0.6829	0.6776	0.7061	0.7738	0.8487	0.67	0.7	0.73	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.338874	NA	NA	NA	NA	NA	0.717	NA	3.6504334
1287	1	149090872	149090872	T	C	intergenic	LOC645166,LOC388692	dist=137818;dist=188604	NA	NA	ncRNA_intronic	ENSG00000179571	NA	NA	NA	NA	NA	1q21.2	NA	NA	NA	NA	rs6593886	0.52	0.52	0.424	0.522564	0.3499	0.6399	0.5187	0.4569	0.6708	0.42	0.65	0.52	0.53	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.713704	NA	NA	NA	NA	NA	0.406	NA	3.6501
1287	1	228466750	228466750	T	C	intronic	OBSCN	NA	NA	NA	intronic	ENSG00000154358	NA	NA	NA	NA	NA	1q42.13	NA	NA	NA	NA	rs3795782	0.27	0.27	0.221	0.240615	0.3499	0.1845	0.3573	0.1876	0.1748	0.35	0.17	0.39	0.16	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.292989	NA	NA	NA	NA	NA	0.268	NA	3.6501
1287	2	171074008	171074008	G	C	intronic	MYO3B	NA	NA	NA	intronic	ENSG00000071909	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	rs6713360	0.31	0.31	0.28	0.300719	0.3499	0.4236	0.5173	0.0295	0.3364	0.34	0.42	0.45	0.05	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.225981	NA	NA	NA	NA	NA	0.391	NA	3.6501
1287	3	168810980	168810980	C	T	intronic	MECOM	NA	NA	NA	intronic	ENSG00000085276	NA	NA	NA	NA	NA	3q26.2	NA	NA	NA	NA	rs12634348	0.32	0.32	0.29	0.33726	0.3499	0.37	0.2421	0.2443	0.4836	0.36	0.35	0.26	0.26	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.073257	NA	NA	NA	NA	NA	0.268	NA	3.6501
1287	7	2297212	2297212	C	T	intronic	SNX8	NA	NA	NA	intronic	ENSG00000106266	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs62442513	0.12	0.12	0.096	0.121406	0.1829	0.0585	0.1931	0.0212	0.2076	0.18	0.07	0.19	0.03	0.167	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.547227	NA	NA	NA	NA	NA	0.072	NA	3.6501
1287	11	16872653	16872653	G	A	intronic	PLEKHA7	NA	NA	NA	intronic	ENSG00000166689	NA	NA	NA	NA	NA	11p15.1	NA	NA	NA	NA	rs35098462	0.35	0.35	0.326	0.33127	0.3499	0.5526	0.3329	0.1755	0.2935	0.35	0.53	0.33	0.17	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.235616	NA	NA	NA	NA	NA	0.268	NA	3.6501
1287	12	120959924	120959924	C	T	intronic	COQ5	NA	NA	NA	intronic	ENSG00000110871	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs1167696	0.28	0.28	0.265	0.258187	0.3499	0.2589	0.3934	0.0598	0.3354	0.36	0.28	0.38	0.07	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.410503	NA	NA	NA	NA	NA	0.246	NA	3.6501
1287	19	46357313	46357313	T	C	intronic	SYMPK	NA	NA	NA	intronic	ENSG00000125755	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs11670136	0.45	0.45	0.485	0.455072	0.3499	0.5188	0.3761	0.5779	0.3875	0.34	0.56	0.35	0.57	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.887083	NA	NA	NA	NA	NA	0.413	NA	3.6501
1287	20	31016314	31016314	A	G	intronic	ASXL1	NA	NA	NA	intronic	ENSG00000171456	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs3818190	0.42	0.42	0.367	0.405751	0.3499	0.7431	0.4294	0.1649	0.4243	0.36	0.74	0.37	0.17	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.997476	NA	NA	NA	NA	NA	0.21	NA	3.6501
1287	6	28500235	28500235	T	C	intronic	GPX5	NA	NA	NA	intronic	ENSG00000224586	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs769189	0.2	0.2	0.185	0.204673	0.0905	0.4226	0.2061	0.0779	0.2679	0.09	0.43	0.21	0.09	0.1628	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.141571	NA	NA	0.09686	0.073536	ID=COSN167725;OCCURENCE=1(large_intestine)	0.152	NA	3.64984
1287	19	47773647	47773647	C	T	intronic	CCDC9	NA	NA	NA	intronic	ENSG00000105321	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs73061366	0.09	0.09	0.062	0.110623	0.0964	0.0903	0.1902	0.0265	0.2035	0.09	0.08	0.17	0.03	0.1349	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.034242	NA	NA	0.119302	0.04108	NA	0.174	NA	3.649398
1287	11	102576468	102576468	C	A	UTR5	MMP27	NM_022122:c.-23G>T	NA	NA	UTR5	ENSG00000137675	ENST00000260229:c.-23G>T	NA	NA	NA	NA	11q22.2	NA	NA	NA	NA	rs11225389	0.14	0.14	0.131	0.127596	0.2286	0.1141	0.219	0.0076	0.135	0.24	0.1	0.18	0.01	0.2039	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.722957	NA	NA	0.25157	0.049705	NA	0.043	NA	3.6492634
1287	2	203747522	203747522	A	G	intronic	WDR12	NA	NA	NA	intronic	ENSG00000138442	NA	NA	NA	NA	NA	2q33.2	NA	NA	NA	NA	rs72934751	0.07	0.07	0.066	0.0459265	0.1302	0.0159	0.0735	0.0136	0.0143	0.14	0.02	0.09	0.01	0.0906	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.368429	NA	NA	0.13006	0.033818	NA	0.036	NA	3.64914
1287	16	2367424	2367424	G	A	intronic	ABCA3	NA	NA	NA	intronic	ENSG00000167972	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs13332547	0.2	0.2	0.157	0.196885	0.0934	0.372	0.3271	0.09	0.1748	0.09	0.35	0.3	0.1	0.159	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.605906	NA	NA	0.098488	0.105096	NA	0.188	NA	3.649112
1287	2	118716166	118716166	C	T	intronic	CCDC93	NA	NA	NA	intronic	ENSG00000125633	NA	NA	NA	NA	NA	2q14.1	NA	NA	NA	NA	rs1991102	0.32	0.32	0.338	0.342452	0.3509	0.1399	0.2493	0.5643	0.3088	0.35	0.12	0.28	0.53	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.096498	NA	NA	NA	NA	NA	0.42	NA	3.6491
1287	3	184293564	184293564	C	T	intronic	EPHB3	NA	NA	NA	intronic	ENSG00000145191,ENSG00000182580	NA	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs7640497	0.32	0.32	0.321	0.31849	0.3509	0.1647	0.2363	0.5182	0.2321	0.33	0.16	0.27	0.51	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.503696	NA	NA	NA	NA	NA	0.362	NA	3.6491
1287	4	2982459	2982459	G	T	intronic	GRK4	NA	NA	NA	intronic	ENSG00000125388	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs3021136	0.28	0.28	0.272	0.257588	0.3509	0.0923	0.2968	0.3699	0.1524	0.35	0.1	0.31	0.36	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.878746	NA	NA	NA	NA	NA	0.188	NA	3.6491
1287	4	5843266	5843266	T	C	intronic	CRMP1	NA	NA	NA	intronic	ENSG00000072832	NA	NA	NA	NA	NA	4p16.2	NA	NA	NA	NA	rs2286282	0.37	0.37	0.373	0.352636	0.3509	0.3294	0.268	0.4758	0.272	0.36	0.37	0.28	0.46	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.62139	NA	NA	NA	NA	NA	0.341	NA	3.6491
1287	5	33458833	33458833	T	C	intronic	TARS	NA	NA	NA	intronic	ENSG00000113407	NA	NA	NA	NA	NA	5p13.3	NA	NA	NA	NA	rs3765146	0.4	0.4	0.388	0.437101	0.3509	0.4911	0.3847	0.4334	0.5123	0.35	0.52	0.34	0.39	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.778666	NA	NA	NA	NA	NA	0.478	NA	3.6491
1287	10	50376106	50376106	A	C	intronic	C10orf128	NA	NA	NA	intronic	ENSG00000204161	NA	NA	NA	NA	NA	10q11.23	NA	NA	NA	NA	rs2466756	0.42	0.42	0.418	0.46246	0.3509	0.3919	0.3963	0.6331	0.4663	0.36	0.35	0.33	0.67	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.670258	NA	NA	NA	NA	NA	0.399	NA	3.6491
1287	18	73139335	73139335	C	G	intronic	SMIM21	NA	NA	NA	intronic	ENSG00000206026	NA	NA	NA	NA	NA	18q23	NA	NA	NA	NA	rs7235563	0.26	0.26	0.254	0.223842	0.3509	0.2103	0.2277	0.1097	0.2587	0.35	0.24	0.29	0.11	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.655308	NA	NA	NA	NA	NA	0.29	NA	3.6491
1287	19	1062370	1062370	T	C	intronic	ABCA7	NA	NA	NA	intronic	ENSG00000064687	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs34606911	0.26	0.26	0.237	0.233427	0.3509	0.1121	0.3876	0.1755	0.2065	0.35	0.13	0.36	0.21	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.06754	NA	NA	NA	NA	NA	0.384	NA	3.6491
1287	19	10077158	10077158	C	A	intronic	COL5A3	NA	NA	NA	intronic	ENSG00000080573	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs3745582	0.35	0.35	0.363	0.366813	0.3509	0.5347	0.3329	0.1399	0.5409	0.35	0.55	0.34	0.14	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.651234	NA	NA	NA	NA	NA	0.239	NA	3.6491
1287	19	17088121	17088121	T	C	intronic	CPAMD8	NA	NA	NA	intronic	ENSG00000160111	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs3826728	0.49	0.49	0.515	0.511781	0.3509	0.5625	0.3617	0.7663	0.3875	0.36	0.56	0.38	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.169827	NA	NA	NA	NA	NA	0.384	NA	3.6491
1287	5	96112284	96112284	A	T	intronic	ERAP1	NA	NA	NA	intronic	ENSG00000153113,ENSG00000164307	NA	NA	NA	NA	NA	5q15	NA	NA	NA	NA	rs56213813	0.07	0.07	0.032	0.0595048	0.1372	NA	0.1138	0.0053	0.0757	0.13	NA	0.12	0.01	0.1026	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.182219	NA	NA	0.111447	0.017727	NA	0.145	NA	3.648753
1287	16	1259456	1259456	G	C	intronic	CACNA1H	NA	NA	NA	intronic	ENSG00000196557	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs2745166	0.06	0.06	0.048	0.0894569	0.1153	0.0308	0.062	0.0061	0.2556	0.12	0.01	0.08	0.0041	0.1209	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.224049	NA	NA	0.115215	0.018408	NA	0.051	NA	3.648585
1287	12	93015506	93015506	G	A	intergenic	CLLU1,C12orf74	dist=190776;dist=81113	NA	NA	intergenic	ENSG00000238865,ENSG00000214215	dist=76743;dist=81113	NA	NA	Score=289;Name=lod=20	NA	12q22	NA	NA	NA	NA	rs10777417	0.74	0.74	0.732	0.710264	0.6849	0.8413	0.7017	0.6188	0.7311	0.71	0.88	0.73	0.65	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.184867	NA	NA	NA	NA	NA	0.659	NA	3.6484334
1287	3	190342418	190342418	A	C	intronic	IL1RAP	NA	NA	NA	ncRNA_exonic	ENSG00000231047	NA	NA	NA	NA	NA	3q28	NA	NA	NA	NA	rs5003916	NA	NA	0.05	0.653355	0.6849	0.8115	0.6354	0.4917	0.6892	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.339795	NA	NA	NA	NA	NA	NA	NA	3.6484333
1287	1	94568491	94568491	A	G	intronic	ABCA4	NA	NA	NA	intronic	ENSG00000198691	NA	NA	NA	NA	NA	1p22.1	NA	NA	NA	NA	rs4847278	0.34	0.34	0.331	0.340455	0.3519	0.2173	0.2882	0.4811	0.3027	0.36	0.23	0.31	0.46	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.266875	NA	NA	NA	NA	NA	0.246	NA	3.6481
1287	1	200575794	200575794	A	G	intronic	KIF14	NA	NA	NA	intronic	ENSG00000118193	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs2794410	0.3	0.3	0.267	0.288339	0.3519	0.1825	0.3199	0.3442	0.2342	0.35	0.19	0.31	0.32	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.148379	NA	NA	NA	NA	ID=COSN163385;OCCURENCE=1(breast)	0.391	NA	3.6481
1287	6	41562530	41562530	A	G	intronic	FOXP4	NA	NA	NA	intronic	ENSG00000137166	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs9367109	0.44	0.44	0.444	0.453075	0.3519	0.3125	0.4308	0.7209	0.3558	0.36	0.33	0.4	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.819361	NA	NA	NA	NA	NA	0.529	NA	3.6481
1287	11	20649448	20649448	G	A	intronic	SLC6A5	NA	NA	NA	intronic	ENSG00000165970	NA	NA	NA	NA	NA	11p15.1	NA	NA	NA	NA	rs2276429	0.31	0.31	0.324	0.289537	0.3519	0.3165	0.3112	0.23	0.2628	0.34	0.29	0.32	0.28	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.647008	NA	NA	NA	NA	NA	0.428	NA	3.6481
1287	12	121018862	121018862	C	T	intronic	POP5	NA	NA	NA	intronic	ENSG00000167272	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs10774559	0.28	0.28	0.259	0.258586	0.3519	0.2579	0.3934	0.0582	0.3384	0.36	0.28	0.38	0.07	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.135728	NA	NA	NA	NA	NA	0.246	NA	3.6481
1287	14	77772829	77772829	A	G	intronic	POMT2	NA	NA	NA	intronic	ENSG00000009830	NA	NA	NA	NA	NA	14q24.3	NA	NA	NA	NA	rs66502123	0.07	0.07	0.064	0.0794728	0.1282	0.0079	0.0533	0.0219	0.1994	0.14	0.01	0.07	0.03	0.1093	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.59137	2.59137	NA	0.114419	0.035179	NA	0.254	NA	3.648081
1287	8	131226752	131226752	A	G	intronic	ASAP1	NA	NA	NA	intronic	ENSG00000153317	NA	NA	NA	NA	NA	8q24.21	NA	NA	NA	NA	rs2303444	0.11	0.11	0.118	0.13778	0.1233	0.1627	0.0476	0.0522	0.3067	0.12	0.18	0.06	0.04	0.1255	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.020521	NA	NA	0.10314	0.072207	NA	0.094	NA	3.64806
1287	2	203836507	203836507	G	C	intronic	ALS2CR8	NA	NA	NA	intronic	ENSG00000138380	NA	NA	NA	NA	NA	2q33.2	NA	NA	NA	NA	rs72928608	0.07	0.07	0.062	0.0461262	0.1302	0.0159	0.0749	0.0136	0.0143	0.14	0.02	0.09	0.01	0.0949	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.214136	NA	NA	0.126959	0.033279	NA	0.036	NA	3.647941
1287	16	57738740	57738740	A	G	intronic	CCDC135	NA	NA	NA	intronic	ENSG00000159625	NA	NA	NA	NA	NA	16q21	NA	NA	NA	NA	rs7194271	0.23	0.23	NA	0.236222	0.1571	0.2817	0.2594	0.2995	0.1687	0.16	0.27	0.23	0.31	0.1952	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.620029	NA	NA	NA	NA	NA	0.232	NA	3.6477
1287	13	76383353	76383353	C	T	intronic	LMO7	NA	NA	NA	intronic	ENSG00000136153	NA	NA	NA	NA	NA	13q22.2	NA	NA	NA	NA	rs9530469	0.07	0.07	0.061	0.0720847	0.1372	0.001	0.0821	0.0272	0.1319	0.13	NA	0.1	0.03	0.0954	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.312398	NA	NA	0.120144	0.038357	NA	0.094	NA	3.647256
1287	1	155723297	155723297	T	C	intronic	GON4L	NA	NA	NA	intronic	ENSG00000116580	NA	NA	NA	NA	NA	1q22	NA	NA	NA	NA	rs6427286	0.57	0.57	0.554	0.552316	0.3529	0.6855	0.3977	0.8116	0.3793	0.36	0.72	0.43	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.045317	NA	NA	NA	NA	NA	0.587	NA	3.6471
1287	7	137082039	137082039	T	C	intronic	DGKI	NA	NA	NA	intronic	ENSG00000157680	NA	NA	NA	NA	NA	7q33	NA	NA	NA	NA	rs2241443	0.25	0.25	0.214	0.249201	0.3529	0.2907	0.3588	0.0477	0.2945	0.34	0.26	0.34	0.05	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.087821	NA	NA	NA	NA	NA	0.261	NA	3.6471
1287	9	78938256	78938256	C	G	intronic	PCSK5	NA	NA	NA	intronic	ENSG00000099139	NA	NA	NA	NA	NA	9q21.13	NA	NA	NA	NA	rs2259775	0.31	0.31	0.309	0.321286	0.3529	0.1359	0.2378	0.4667	0.3425	0.36	0.13	0.27	0.49	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.016584	NA	NA	NA	NA	NA	0.283	NA	3.6471
1287	3	56026034	56026034	C	T	intronic	ERC2	NA	NA	NA	intronic	ENSG00000187672	NA	NA	NA	NA	NA	3p14.3	NA	NA	NA	NA	rs4974160	0.27	0.27	0.273	0.213059	0.169	0.3413	0.1657	0.202	0.1748	0.18	0.38	0.21	0.31	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.453929	NA	NA	0.183905	0.239782	NA	0.232	NA	3.647095
1287	2	28634790	28634790	G	A	intronic	FOSL2	NA	NA	NA	exonic	ENSG00000075426	NA	synonymous SNV	ENSG00000075426:ENST00000379619:exon4:c.G432A:p.P144P	NA	NA	2p23.2	NA	NA	NA	NA	rs12624279	0.28	0.28	0.287	0.294129	0.4056	0.1835	0.2248	0.2141	0.4509	0.41	0.18	0.27	0.19	0.3675	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.070048	NA	NA	0.413256	0.256695	NA	0.29	NA	3.6469773
1287	12	31555611	31555611	G	A	intronic	DENND5B	NA	NA	NA	intronic	ENSG00000170456	NA	NA	NA	NA	NA	12p11.21	NA	NA	NA	NA	rs16918614	0.13	0.13	0.11	0.124601	0.1233	0.248	0.0893	0.0363	0.1431	0.12	0.24	0.1	0.03	0.124	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.740002	NA	NA	0.105781	0.03874	NA	0.072	NA	3.646919
1287	19	51918901	51918901	G	A	intronic	SIGLEC10	NA	NA	NA	intronic	ENSG00000142512	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs112905231	0.1	0.1	0.087	0.138379	0.1193	0.1032	0.0937	0.2005	0.1421	0.1	0.09	0.1	0.13	0.1183	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.745876	NA	NA	0.115698	0.178393	NA	0.058	NA	3.646702
1287	9	137998709	137998709	T	A	intronic	OLFM1	NA	NA	NA	intronic	ENSG00000130558	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs35408956	0.08	0.08	0.047	0.0780751	0.1093	0.0367	0.1715	0.0038	0.1227	0.12	0.03	0.16	0.01	0.14	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.807941	1.807941	NA	0.10407	0.02089	NA	0.116	NA	3.64663
1287	17	63534478	63534478	G	A	intronic	AXIN2	NA	NA	NA	intronic	ENSG00000168646,ENSG00000266076	NA	NA	NA	NA	NA	17q24.1	NA	NA	NA	NA	rs35399989	0.15	0.15	0.133	0.164137	0.1243	0.1062	0.0951	0.2617	0.182	0.11	0.1	0.12	0.27	0.1188	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.913863	NA	NA	0.110349	0.220381	NA	0.101	NA	3.646551
1287	19	51994851	51994851	C	G	UTR3	SIGLEC12	NM_033329:c.*44G>C,NM_053003:c.*44G>C	NA	NA	UTR3	ENSG00000254521	ENST00000596742:c.*1047G>C,ENST00000291707:c.*44G>C	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs16982735	0.21	0.21	0.195	0.201478	0.2406	0.1002	0.1715	0.3245	0.1207	0.23	0.09	0.19	0.31	0.2134	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.661918	NA	NA	0.233023	0.310259	NA	0.268	NA	3.6463104
1287	9	19089375	19089375	A	C	intronic	HAUS6	NA	NA	NA	intronic	ENSG00000147874	NA	NA	NA	NA	NA	9p22.1	NA	NA	NA	NA	rs41269007	0.1	0.1	0.087	0.0964457	0.1014	0.0317	0.1527	0.0983	0.1155	0.11	0.02	0.17	0.11	0.1229	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.227827	4.227827	NA	0.129419	0.107354	NA	0.174	NA	3.646281
1287	19	579699	579699	C	T	intronic	BSG	NA	NA	NA	intronic	ENSG00000172270	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs12608994	0.15	0.15	0.151	0.191893	0.1103	0.2292	0.0908	0.2209	0.2699	0.11	0.2	0.11	0.2	0.1424	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.643764	NA	NA	0.101073	0.176846	NA	0.109	NA	3.646227
1287	11	133801262	133801262	G	A	intronic	IGSF9B	NA	NA	NA	intronic	ENSG00000080854	NA	NA	NA	NA	NA	11q25	NA	NA	NA	NA	rs329671	0.28	0.28	0.284	0.249002	0.3539	0.2718	0.2781	0.1036	0.2935	0.36	0.29	0.31	0.13	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.208364	NA	NA	NA	NA	NA	0.174	NA	3.6461
1287	12	4446116	4446116	T	C	intronic	C12orf5	NA	NA	NA	intronic	ENSG00000078237	NA	NA	NA	NA	NA	12p13.32	NA	NA	NA	NA	rs7296163	0.33	0.33	0.319	0.316494	0.3539	0.3581	0.3818	0.2723	0.2485	0.35	0.32	0.36	0.3	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.377887	NA	NA	NA	NA	NA	0.29	NA	3.6461
1287	14	23874117	23874117	T	C	intronic	MYH6	NA	NA	NA	intronic	ENSG00000197616	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs440466	0.32	0.32	0.322	0.324681	0.3539	0.0853	0.2637	0.562	0.2638	0.34	0.07	0.32	0.56	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.539927	NA	NA	NA	NA	NA	0.355	NA	3.6461
1287	15	78271253	78271253	C	T	intergenic	LOC645752,LOC91450	dist=52065;dist=14322	NA	NA	ncRNA_exonic	ENSG00000261143	NA	NA	NA	NA	NA	15q24.3	NA	NA	NA	NA	rs11632006	0.22	0.22	NA	0.248003	0.3539	0.1369	0.2478	0.2829	0.2065	0.27	0.15	0.24	0.19	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.343151	NA	NA	NA	NA	NA	NA	NA	3.6461
1287	18	6986050	6986050	C	A	intronic	LAMA1	NA	NA	NA	intronic	ENSG00000101680	NA	NA	NA	NA	NA	18p11.31	NA	NA	NA	NA	rs59480422	0.39	0.39	0.344	0.381789	0.3539	0.6677	0.4971	0.0189	0.5245	0.37	0.71	0.41	0.04	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.876895	NA	NA	NA	NA	NA	0.232	NA	3.6461
1287	21	43325973	43325973	A	G	intronic	C2CD2	NA	NA	NA	intronic	ENSG00000157617	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs384749	0.26	0.26	0.295	0.256989	0.1074	0.2728	0.1023	0.5484	0.1104	0.1	0.28	0.1	0.58	0.1461	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011618	NA	NA	0.10093	0.48729	NA	0.254	NA	3.64557
1287	12	6859191	6859191	G	A	intronic	MLF2	NA	NA	NA	intronic	ENSG00000089693	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs7969956	0.14	0.14	0.151	0.136382	0.1034	0.121	0.1571	0.2224	0.0552	0.11	0.1	0.12	0.25	0.1191	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.32854	NA	NA	0.131977	0.216977	NA	0.174	NA	3.645523
1287	3	44906746	44906746	A	G	UTR3	TMEM42	NM_144638:c.*74A>G	NA	NA	UTR3	ENSG00000169964	ENST00000302392:c.*74A>G	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs10429	0.8	0.8	0.78	0.82528	0.6879	1	0.8487	0.711	0.9243	0.7	1	0.85	0.69	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.189797	NA	NA	NA	NA	NA	0.797	NA	3.6454334
1287	19	19232666	19232666	C	T	intronic	TMEM161A	NA	NA	NA	intronic	ENSG00000064545	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs72993474	0.13	0.13	0.139	0.138778	0.1123	0.0367	0.1095	0.2572	0.1319	0.12	0.04	0.12	0.25	0.1236	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.281909	NA	NA	0.118721	0.237631	NA	0.21	NA	3.645379
1287	17	76481693	76481693	C	G	exonic	DNAH17	NA	synonymous SNV	DNAH17:NM_173628:exon47:c.G7422C:p.T2474T	exonic	ENSG00000187775	NA	synonymous SNV	ENSG00000187775:ENST00000389840:exon47:c.G7380C:p.T2460T,ENSG00000187775:ENST00000585328:exon47:c.G7407C:p.T2469T	NA	NA	17q25.3	NA	NA	NA	NA	rs11872051	0.62	0.62	0.584	0.642372	0.674	0.621	0.7305	0.5378	0.7106	0.66	0.6	0.74	0.5	0.6712	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.692425	NA	NA	0.676242	0.582791	ID=COSM437662;OCCURENCE=1(breast)	0.594	NA	3.6452246
1287	12	6858971	6858971	C	T	intronic	MLF2	NA	NA	NA	intronic	ENSG00000089693	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs7970575	0.14	0.14	0.167	0.135982	0.1034	0.121	0.1571	0.2224	0.0532	0.11	0.1	0.12	0.25	0.1194	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.847765	NA	NA	0.131977	0.21675	NA	0.174	NA	3.645223
1287	6	154743525	154743525	T	C	intronic	CNKSR3	NA	NA	NA	intronic	ENSG00000153721	NA	NA	NA	NA	NA	6q25.2	NA	NA	NA	NA	rs7771159	0.27	0.27	0.263	0.261581	0.3549	0.2063	0.2305	0.2897	0.2065	0.33	0.19	0.27	0.28	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.290916	NA	NA	NA	NA	NA	0.268	NA	3.6451
1287	7	20406542	20406542	A	C	intronic	ITGB8	NA	NA	NA	intronic	ENSG00000105855	NA	NA	NA	NA	NA	7p21.1	NA	NA	NA	NA	rs34556056	0.19	0.19	0.167	0.163339	0.3549	0.001	0.1585	0.1959	0.093	0.35	0.0017	0.17	0.15	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.505033	3.505033	NA	NA	NA	NA	0.094	NA	3.6451
1287	8	142186963	142186963	G	A	intronic	DENND3	NA	NA	NA	intronic	ENSG00000105339	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs2241734	0.28	0.28	0.273	0.255192	0.3549	0.3254	0.2305	0.0885	0.3231	0.34	0.35	0.28	0.09	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.087	NA	NA	NA	NA	NA	0.217	NA	3.6451
1287	11	118012164	118012164	G	A	intronic	SCN4B	NA	NA	NA	intronic	ENSG00000177098	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs656445	0.33	0.33	0.306	0.316693	0.3549	0.2788	0.3458	0.3533	0.2464	0.36	0.26	0.4	0.31	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.039236	NA	NA	NA	NA	NA	0.275	NA	3.6451
1287	12	9353828	9353828	A	T	intronic	PZP	NA	NA	NA	intronic	ENSG00000126838	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs3759275	0.34	0.34	0.34	0.348243	0.3549	0.4405	0.2695	0.3026	0.364	0.34	0.43	0.26	0.3	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.732715	NA	NA	NA	NA	NA	0.283	NA	3.6451
1287	13	25486287	25486287	C	T	intronic	CENPJ	NA	NA	NA	intronic	ENSG00000151849	NA	NA	NA	NA	NA	13q12.12	NA	NA	NA	NA	rs2290276	0.33	0.33	0.3	0.321286	0.3549	0.3571	0.4078	0.1626	0.4029	0.37	0.4	0.4	0.14	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.309302	NA	NA	NA	NA	NA	0.254	NA	3.6451
1287	13	79216418	79216418	A	G	intronic	RNF219	NA	NA	NA	intronic	ENSG00000152193	NA	NA	NA	NA	NA	13q31.1	NA	NA	NA	NA	rs7327732	0.37	0.37	0.367	0.359225	0.3549	0.3333	0.2752	0.4402	0.3405	0.38	0.33	0.28	0.46	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.386124	NA	NA	NA	NA	NA	0.304	NA	3.6451
1287	10	96701601	96701601	G	C	intronic	CYP2C9	NA	NA	NA	intronic	ENSG00000138109	NA	NA	NA	NA	NA	10q23.33	NA	NA	NA	NA	rs9332119	0.07	0.07	0.057	0.0491214	0.1272	0.001	0.1023	0.0091	0.0348	0.13	0.0035	0.13	0.02	0.0944	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.455215	NA	NA	0.133372	0.027236	NA	0.094	NA	3.645028
1287	19	23869823	23869823	T	G	intronic	ZNF675	NA	NA	NA	intronic	ENSG00000197372	NA	NA	NA	NA	NA	19p12	NA	Name=ELF1_(SC-631),TAF1,GATA-1,Pol2,TCF4,AP-2gamma,TBP,Pol2(b),AP-2alpha,HA-E2F1,Sin3Ak-20,KAP1,Pol2-4H8	Name=47	NA	rs2364624	0.64	0.64	0.628	0.624201	0.8191	0.4504	0.5634	0.5991	0.68	0.82	0.47	0.62	0.58	0.7232	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.269838	NA	NA	0.812674	0.617794	NA	0.659	NA	3.645026
1288	7	150556152	150556152	G	A	intronic	ABP1	NA	NA	NA	intronic	ENSG00000002726	NA	NA	NA	NA	NA	7q36.1	NA	NA	NA	NA	rs11981217	0.11	0.11	0.105	0.11901	0.1153	0.0218	0.085	0.1906	0.1503	0.12	0.01	0.1	0.2	0.1365	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.183873	NA	NA	0.103296	0.149792	NA	0.203	NA	3.644904
1288	15	42492185	42492185	C	A	intronic	VPS39	NA	NA	NA	intronic	ENSG00000166887	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs2928335	0.27	0.27	NA	0.386981	0.1342	0.1815	0.4914	0.6959	0.3671	0.1	0.15	0.41	0.57	0.2209	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.077989	NA	NA	NA	NA	NA	0.239	NA	3.6449
1288	9	5732483	5732483	T	C	intronic	KIAA1432	NA	NA	NA	intronic	ENSG00000107036	NA	NA	NA	Score=610;Name=lod=400	NA	9p24.1	NA	NA	NA	NA	rs7850299	0.49	0.49	0.464	0.482428	0.4304	0.8363	0.4769	0.1634	0.6063	0.45	0.84	0.49	0.15	0.4862	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.89905	1.89905	NA	0.438953	0.194507	NA	0.406	NA	3.644447
1288	15	42709998	42709998	T	C	intronic	ZNF106	NA	NA	NA	intronic	ENSG00000103994	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs62022300	0.07	0.07	0.064	0.0623003	0.1173	0.006	0.0778	0.0794	0.0297	0.11	NA	0.08	0.08	0.1005	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.059258	NA	NA	0.137939	0.089877	NA	0.087	NA	3.644261
1288	13	111340042	111340042	A	C	intronic	CARS2	NA	NA	NA	intronic	ENSG00000134905	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs78646508	0.08	0.08	0.062	0.0615016	0.1312	0.0774	0.0591	0.0136	0.0399	0.12	0.08	0.07	0.02	0.1087	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.956414	NA	NA	0.115868	0.030186	NA	0.051	NA	3.644232
1288	16	22926257	22926257	C	T	intronic	HS3ST2	NA	NA	NA	intronic	ENSG00000122254	NA	NA	NA	NA	NA	16p12.2	NA	NA	NA	NA	rs62049086	0.07	0.07	0.063	0.0595048	0.1491	0.0198	0.0865	0.0076	0.0593	0.15	0.02	0.09	0.01	0.0882	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.017408	NA	NA	0.118488	0.025034	NA	0.109	NA	3.644212
1288	10	124325569	124325569	A	G	intronic	DMBT1	NA	NA	NA	intronic	ENSG00000187908	NA	NA	NA	NA	NA	10q26.13	NA	Name=CTCF	NA	NA	rs3019516	0.68	0.68	0.643	0.689297	0.6789	0.7758	0.7752	0.5582	0.727	0.69	0.77	0.76	0.52	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.059981	NA	NA	0.676933	0.57948	NA	0.688	NA	3.644167
1288	1	145533001	145533001	T	C	intronic	ITGA10,NBPF10	NA	NA	NA	intronic	ENSG00000143127	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs35103913	NA	NA	NA	0.198882	0.3559	0.1607	0.3429	0.0613	0.1605	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.752339	NA	NA	NA	NA	NA	NA	NA	3.6441
1288	1	222715247	222715247	A	G	intronic	HHIPL2	NA	NA	NA	intronic	ENSG00000143512	NA	NA	NA	NA	NA	1q41	NA	NA	NA	NA	rs11487812	0.56	0.56	0.558	0.550519	0.3559	0.6558	0.5965	0.7451	0.3466	0.36	0.67	0.52	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.521179	NA	NA	NA	NA	NA	0.536	NA	3.6441
1288	6	30864700	30864700	C	T	intronic	DDR1	NA	NA	NA	intronic	ENSG00000204580	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs1264317	0.24	0.24	0.249	0.222843	0.3559	0.251	0.2075	0.0983	0.2362	0.35	0.29	0.2	0.06	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.113946	NA	NA	NA	NA	NA	0.283	NA	3.6441
1288	6	30884806	30884806	A	C	intronic	VARS2	NA	NA	NA	intronic	ENSG00000137411	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs1264297	0.24	0.24	0.232	0.222045	0.3559	0.247	0.2075	0.0983	0.2362	0.35	0.28	0.2	0.06	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.029337	NA	NA	NA	NA	NA	0.283	NA	3.6441
1288	17	38192137	38192137	T	G	intronic	MED24	NA	NA	NA	intronic	ENSG00000008838	NA	NA	NA	NA	NA	17q21.1	NA	NA	NA	NA	rs11078935	0.31	0.31	0.293	0.315495	0.3559	0.4226	0.4107	0.0703	0.4274	0.35	0.41	0.41	0.08	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.032274	3.032274	NA	NA	NA	NA	0.362	NA	3.6441
1288	22	32547626	32547626	T	C	intronic	C22orf42	NA	NA	NA	intronic	ENSG00000205856	NA	NA	NA	NA	NA	22q12.3	NA	NA	NA	NA	rs5998254	0.39	0.39	0.397	0.440096	0.3559	0.1458	0.2536	0.8707	0.3804	0.35	0.13	0.28	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.841311	NA	NA	NA	NA	NA	0.362	NA	3.6441
1288	9	137702059	137702059	G	C	intronic	COL5A1	NA	NA	NA	intronic	ENSG00000130635	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs3811152	0.2	0.2	0.224	0.247204	0.1103	0.1022	0.1282	0.5893	0.1595	0.11	0.11	0.1	0.52	0.1438	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.144956	NA	NA	0.102209	0.504085	NA	0.275	NA	3.643691
1288	7	100486035	100486035	C	A	intronic	SRRT	NA	NA	NA	intronic	ENSG00000087087	NA	NA	NA	NA	NA	7q22.1	NA	Name=Pol2,HEY1,Pol2-4H8	NA	NA	rs2720392	0.29	0.29	0.258	0.276558	0.4811	0.125	0.3012	0.1634	0.3579	0.48	0.11	0.35	0.16	0.3881	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.805485	NA	NA	0.487326	0.208352	NA	0.246	NA	3.643474
1288	17	1410393	1410393	A	C	intronic	INPP5K	NA	NA	NA	intronic	ENSG00000132376	NA	NA	NA	NA	NA	17p13.3	NA	NA	NA	NA	rs34308535	0.12	0.12	0.118	0.103235	0.1163	0.128	0.0807	0.1415	0.0286	0.12	0.12	0.09	0.15	0.1115	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.501258	2.501258	NA	0.12907	0.137829	NA	0.138	NA	3.64313
1288	6	168280925	168280925	A	G	intronic	MLLT4	NA	NA	NA	intronic	ENSG00000130396	NA	NA	NA	NA	NA	6q27	NA	NA	NA	NA	rs2301532	0.39	0.39	0.391	0.383187	0.3569	0.5992	0.3588	0.2042	0.4468	0.37	0.59	0.38	0.22	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.249637	NA	NA	NA	NA	NA	0.304	NA	3.6431
1288	10	71016947	71016947	C	G	intronic	HKDC1	NA	NA	NA	intronic	ENSG00000156510	NA	NA	NA	NA	NA	10q22.1	NA	NA	NA	NA	rs2279930	0.36	0.36	0.322	0.340655	0.3569	0.5575	0.4986	0.1619	0.2301	0.36	0.5	0.44	0.15	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.757592	1.757592	NA	NA	NA	NA	0.261	NA	3.6431
1288	10	99426975	99426975	C	T	intronic	PI4K2A	NA	NA	NA	intronic	ENSG00000155252,ENSG00000249967	NA	NA	NA	NA	NA	10q24.2	NA	NA	NA	NA	rs4254004	0.37	0.37	NA	0.506589	0.3569	0.4712	0.4395	0.6974	0.4867	0.28	0.39	0.36	0.46	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.017273	NA	NA	NA	NA	NA	0.442	NA	3.6431
1288	15	42137773	42137773	G	A	intronic	JMJD7-PLA2G4B,PLA2G4B	NA	NA	NA	intronic	ENSG00000168970,ENSG00000243708	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs4924580	0.24	0.24	0.195	0.236022	0.3569	0.1706	0.415	0.0401	0.317	0.37	0.15	0.38	0.05	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.91966	NA	NA	NA	NA	NA	0.152	NA	3.6431
1288	16	55516767	55516767	G	A	intronic	MMP2	NA	NA	NA	intronic	ENSG00000087245	NA	NA	NA	NA	NA	16q12.2	NA	NA	NA	NA	rs1030868	0.37	0.37	0.336	0.354832	0.3569	0.2391	0.487	0.4395	0.2638	0.39	0.27	0.43	0.39	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.137208	NA	NA	NA	NA	NA	0.348	NA	3.6431
1288	18	21481340	21481340	A	G	intronic	LAMA3	NA	NA	NA	intronic	ENSG00000053747	NA	NA	NA	NA	NA	18q11.2	NA	NA	NA	NA	rs1154227	0.45	0.45	0.429	0.434904	0.3569	0.7619	0.3314	0.2874	0.4509	0.35	0.76	0.33	0.31	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.179409	NA	NA	NA	NA	NA	0.399	NA	3.6431
1288	19	11106790	11106790	T	C	intronic	SMARCA4	NA	NA	NA	intronic	ENSG00000127616	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs11669202	0.32	0.32	0.324	0.332668	0.3569	0.2659	0.2147	0.326	0.4693	0.35	0.26	0.28	0.34	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.475058	NA	NA	NA	NA	NA	0.254	NA	3.6431
1288	20	31606237	31606237	C	T	intronic	BPIFB2	NA	NA	NA	intronic	ENSG00000078898	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs3746388	0.23	0.23	0.24	0.232428	0.3569	0.1042	0.2089	0.1982	0.2996	0.36	0.09	0.21	0.21	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.429455	NA	NA	NA	NA	NA	0.355	NA	3.6431
1288	20	31609433	31609433	T	C	intronic	BPIFB2	NA	NA	NA	intronic	ENSG00000078898	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs13043556	0.41	0.41	0.45	0.438498	0.3569	0.2361	0.3703	0.7451	0.365	0.35	0.25	0.37	0.73	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.652113	NA	NA	NA	NA	NA	0.536	NA	3.6431
1288	11	193698	193698	C	T	intronic	LOC653486,SCGB1C1	NA	NA	NA	intronic	ENSG00000177951,ENSG00000188076	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs2294083	0.24	0.24	0.192	NA	NA	NA	NA	NA	NA	0.16	0.39	0.23	0.19	0.2159	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.916495	NA	NA	0.141086	0.142389	NA	0.196	NA	3.643014
1288	3	370051	370051	C	T	intronic	CHL1	NA	NA	NA	intronic	ENSG00000134121	NA	NA	NA	NA	NA	3p26.3	NA	NA	NA	NA	rs62227239	0.15	0.15	0.174	0.15615	0.1103	0.0079	0.0865	0.4251	0.0419	0.1	0.01	0.09	0.44	0.122	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.291336	NA	NA	0.124796	0.376476	NA	0.196	NA	3.642904
1288	15	42710177	42710177	G	A	intronic	ZNF106	NA	NA	NA	intronic	ENSG00000103994	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs17708630	0.06	0.06	0.057	0.0523163	0.1173	0.006	0.0735	0.0439	0.0297	0.11	NA	0.08	0.04	0.1021	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.262614	NA	NA	0.137823	0.061507	NA	0.087	NA	3.642777
1288	6	13288578	13288578	G	A	intronic	LOC100130357	NA	NA	NA	ncRNA_intronic	ENSG00000215022	NA	NA	NA	NA	NA	6p24.1	NA	NA	NA	NA	rs202039	0.69	0.69	0.706	0.678914	0.6909	0.4444	0.7522	0.9206	0.5297	0.68	0.46	0.76	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.132314	NA	NA	NA	NA	NA	0.71	NA	3.6424333
1288	2	220336723	220336723	C	T	intronic	SPEG	NA	NA	NA	intronic	ENSG00000072195	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs73087210	0.16	0.16	0.153	0.175319	0.1143	0.1071	0.1772	0.3056	0.1309	0.12	0.12	0.16	0.26	0.1307	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.890473	1.890473	NA	0.112577	0.25186	NA	0.159	NA	3.642423
1288	1	145597417	145597417	C	A	intronic	NBPF10,POLR3C	NA	NA	NA	intronic	ENSG00000186141	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs9728345	0.23	0.23	0.194	0.201078	0.3579	0.1548	0.3343	0.0635	0.1789	0.36	0.13	0.35	0.07	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.665124	2.665124	NA	NA	NA	NA	0.203	NA	3.6421
1288	3	125787126	125787126	C	T	intronic	SLC41A3	NA	NA	NA	intronic	ENSG00000114544	NA	NA	NA	NA	NA	3q21.2	NA	NA	NA	NA	rs6438966	0.28	0.28	0.294	0.285144	0.3579	0.1528	0.245	0.3154	0.3344	0.35	0.14	0.28	0.33	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.052272	NA	NA	NA	NA	NA	0.217	NA	3.6421
1288	4	48173547	48173547	A	G	intronic	TEC	NA	NA	NA	intronic	ENSG00000135605	NA	NA	NA	NA	NA	4p12	NA	NA	NA	NA	rs7669393	0.52	0.52	0.525	0.519369	0.3579	0.8929	0.4928	0.3336	0.5706	0.36	0.92	0.44	0.36	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.090176	NA	NA	NA	NA	NA	0.449	NA	3.6421
1288	5	77523092	77523092	G	A	intronic	AP3B1	NA	NA	NA	intronic	ENSG00000132842	NA	NA	NA	NA	NA	5q14.1	NA	NA	NA	NA	rs7714159	0.33	0.33	0.31	0.327676	0.3579	0.3244	0.3199	0.3525	0.272	0.34	0.31	0.32	0.36	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.75017	NA	NA	NA	NA	NA	0.37	NA	3.6421
1288	9	95683228	95683228	C	G	intergenic	ZNF484,FGD3	dist=42908;dist=26373	NA	NA	ncRNA_exonic	ENSG00000188101	NA	NA	NA	NA	NA	9q22.31	NA	NA	NA	NA	rs7047181	0.36	0.36	0.341	0.366613	0.3579	0.122	0.4885	0.5983	0.228	0.34	0.12	0.5	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.198604	NA	NA	NA	NA	NA	0.399	NA	3.6421
1288	16	29156139	29156139	C	T	intergenic	RRN3P2,SNX29P2	dist=28101;dist=157469	NA	NA	ncRNA_intronic	ENSG00000260517	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs12924041	0.34	0.34	0.297	0.286342	0.3579	0.4296	0.3746	0.1293	0.2147	0.36	0.47	0.4	0.13	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.709084	NA	NA	NA	NA	NA	0.355	NA	3.6421
1288	17	38153473	38153473	C	T	intronic	PSMD3	NA	NA	NA	intronic	ENSG00000108344	NA	NA	NA	NA	NA	17q21.1	NA	NA	NA	NA	rs12453334	0.3	0.3	0.299	0.30651	0.3579	0.4256	0.3919	0.0393	0.4315	0.35	0.4	0.38	0.05	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.237516	NA	NA	NA	NA	NA	0.341	NA	3.6421
1288	12	31242218	31242218	A	G	intronic	DDX11	NA	NA	NA	intronic	ENSG00000013573	NA	NA	NA	NA	NA	12p11.21	NA	NA	NA	NA	rs4081648	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.358	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.535418	NA	NA	NA	NA	NA	NA	NA	3.642
1288	19	4660799	4660799	C	T	intronic	C19orf10	NA	NA	NA	intronic	ENSG00000074842	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs2286366	0.25	0.25	0.284	0.272564	0.1083	0.1885	0.0994	0.6604	0.1268	0.11	0.19	0.09	0.64	0.1564	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.281169	NA	NA	0.093488	0.568089	NA	0.275	NA	3.641812
1288	7	143141475	143141475	T	C	exonic	TAS2R60	NA	synonymous SNV	TAS2R60:NM_177437:exon1:c.T930C:p.R310R	exonic	ENSG00000185899	NA	synonymous SNV	ENSG00000185899:ENST00000332690:exon1:c.T930C:p.R310R	NA	NA	7q35	NA	NA	NA	NA	rs4595035	0.69	0.69	0.651	0.707268	0.66	0.8889	0.7853	0.5061	0.7853	0.65	0.88	0.74	0.51	0.6964	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.129413	NA	NA	0.668528	0.535422	NA	0.703	NA	3.6417386
1288	10	28345370	28345370	G	A	intronic	MPP7	NA	NA	NA	intronic	ENSG00000150054	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs118187581	0.08	0.08	0.083	0.0640974	0.1441	0.0079	0.0663	0.056	0.0491	0.14	0.01	0.08	0.05	0.0907	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.045209	NA	NA	0.123721	0.067181	NA	0.145	NA	3.641479
1288	2	237285889	237285889	G	A	intronic	IQCA1	NA	NA	NA	intronic	ENSG00000132321	NA	NA	NA	NA	NA	2q37.2	NA	NA	NA	NA	rs6431458	0.12	0.12	0.095	0.115615	0.171	0.0575	0.2334	0.0628	0.1063	0.18	0.06	0.2	0.05	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.576449	NA	NA	0.187618	0.064306	NA	0.109	NA	3.641382
1288	1	79095339	79095339	A	C	intronic	IFI44L	NA	NA	NA	intronic	ENSG00000137959	NA	NA	NA	NA	NA	1p31.1	NA	NA	NA	NA	rs273256	0.47	0.47	0.488	0.472843	0.3588	0.751	0.3631	0.4516	0.41	0.36	0.77	0.32	0.41	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.559024	NA	NA	NA	NA	NA	0.601	NA	3.6412
1288	1	145021034	145021034	C	A	intronic	NBPF9,PDE4DIP	NA	NA	NA	intronic	ENSG00000178104	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs674066	NA	NA	NA	0.269569	0.3588	0.125	0.33	0.2708	0.2822	NA	NA	NA	NA	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.308701	NA	NA	NA	NA	NA	0.167	NA	3.6412
1288	3	111962774	111962774	T	C	intronic	SLC9C1	NA	NA	NA	intronic	ENSG00000172139	NA	NA	NA	NA	NA	3q13.2	NA	NA	NA	NA	rs13089316	0.33	0.33	0.334	0.313898	0.3588	0.4345	0.3084	0.1399	0.3824	0.36	0.47	0.29	0.15	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.034163	NA	NA	NA	NA	NA	0.319	NA	3.6412
1288	3	111988992	111988992	T	G	intronic	SLC9C1	NA	NA	NA	intronic	ENSG00000172139	NA	NA	NA	NA	NA	3q13.2	NA	NA	NA	NA	rs13069541	0.33	0.33	0.327	0.313898	0.3588	0.4345	0.3084	0.1399	0.3824	0.36	0.47	0.29	0.15	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.191045	NA	NA	NA	NA	NA	0.319	NA	3.6412
1288	9	95683366	95683366	T	G	intergenic	ZNF484,FGD3	dist=43046;dist=26235	NA	NA	ncRNA_intronic	ENSG00000188101	NA	NA	NA	NA	NA	9q22.31	NA	NA	NA	NA	rs7035868	0.37	0.37	0.349	0.369409	0.3588	0.122	0.4885	0.6074	0.229	0.34	0.12	0.5	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.322494	NA	NA	NA	NA	NA	0.399	NA	3.6412
1288	10	5165886	5165886	C	T	intergenic	AKR1C3,AKR1CL1	dist=16008;dist=30769	NA	NA	ncRNA_intronic	ENSG00000225418	NA	NA	NA	NA	NA	10p15.1	NA	NA	NA	NA	rs7069331	0.19	0.19	0.193	0.160144	0.3588	NA	0.1801	0.1278	0.1503	0.35	NA	0.22	0.17	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.122016	NA	NA	NA	NA	NA	0.109	NA	3.6412
1288	12	124158080	124158080	A	G	intronic	TCTN2	NA	NA	NA	intronic	ENSG00000168778	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs7978447	0.27	0.27	0.271	0.271565	0.3588	0.0565	0.2291	0.3949	0.2669	0.36	0.05	0.25	0.38	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.228889	NA	NA	NA	NA	NA	0.217	NA	3.6412
1288	12	124171658	124171658	C	T	intronic	TCTN2	NA	NA	NA	intronic	ENSG00000168778	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs7309528	0.27	0.27	0.262	0.272165	0.3588	0.0565	0.2291	0.3971	0.2669	0.36	0.05	0.25	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.772237	NA	NA	NA	NA	NA	0.21	NA	3.6412
1288	12	124181820	124181820	A	G	intronic	TCTN2	NA	NA	NA	intronic	ENSG00000168778	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs7979528	0.27	0.27	0.246	0.272165	0.3588	0.0565	0.2291	0.3971	0.2669	0.36	0.05	0.25	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.342205	NA	NA	NA	NA	NA	0.217	NA	3.6412
1288	17	16833755	16833755	A	G	intergenic	KRT16P2,TNFRSF13B	dist=97608;dist=8643	NA	NA	ncRNA_intronic	ENSG00000128438	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs3829585	0.51	0.51	0.483	0.521765	0.3588	0.7282	0.5	0.5129	0.5041	0.35	0.71	0.47	0.53	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.264424	NA	NA	NA	NA	NA	0.42	NA	3.6412
1288	4	27000995	27000995	A	G	intronic	STIM2	NA	NA	NA	intronic	ENSG00000109689	NA	NA	NA	NA	Name=Obesity-related traits	4p15.2	NA	NA	NA	NA	rs6822297	0.31	0.31	0.286	0.299321	0.4732	0.1597	0.3948	0.146	0.4039	0.47	0.16	0.4	0.15	0.4147	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.683865	NA	NA	0.47093	0.192692	ID=COSN167181;OCCURENCE=1(large_intestine)	0.319	NA	3.64117
1288	1	47607762	47607762	T	C	intronic	CYP4A22	NA	NA	NA	ncRNA_intronic	ENSG00000225506	NA	NA	NA	NA	NA	1p33	NA	NA	NA	NA	rs2056901	0.3	0.3	0.291	0.345048	0.2038	0.5546	0.2363	0.2133	0.5297	0.2	0.55	0.25	0.21	0.2802	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.051992	NA	NA	0.208488	0.239446	NA	0.217	NA	3.6408453
1288	17	53844847	53844847	C	T	intronic	PCTP	NA	NA	NA	intronic	ENSG00000141179	NA	NA	NA	NA	NA	17q22	NA	Name=HNF4A_(H-171),HNF4G_(SC-6558)	Name=2	NA	rs35430620	0.66	0.66	0.622	0.619609	0.8022	0.8571	0.7017	0.121	0.8027	0.81	0.88	0.73	0.13	0.7549	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.719801	NA	NA	0.802093	0.251021	NA	0.558	NA	3.640807
1288	2	79255325	79255325	G	C	intronic	REG3G	NA	NA	NA	intronic	ENSG00000143954	NA	NA	NA	Score=304;Name=lod=23	NA	2p12	NA	NA	NA	NA	rs2290079	0.42	0.42	0.387	0.391773	0.4672	0.4623	0.4856	0.2958	0.3047	0.47	0.41	0.45	0.33	0.4329	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.910706	NA	NA	0.459186	0.330232	NA	0.442	NA	3.640714
1288	1	183192496	183192496	A	G	intronic	LAMC2	NA	NA	NA	intronic	ENSG00000058085	NA	NA	NA	NA	NA	1q25.3	NA	NA	NA	NA	rs3738824	0.13	0.13	0.117	0.113219	0.1034	0.1438	0.1427	0.1074	0.0787	0.11	0.16	0.14	0.12	0.128	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.096617	NA	NA	0.127907	0.111666	NA	0.094	NA	3.640693
1288	19	7808163	7808163	G	C	intronic	CD209	NA	NA	NA	intronic	ENSG00000090659	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs11465391	0.14	0.14	0.135	0.147165	0.1372	0.0556	0.0749	0.289	0.1115	0.14	0.06	0.08	0.26	0.1188	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.949465	NA	NA	0.103488	0.229006	NA	0.21	NA	3.640512
1288	3	9727002	9727002	G	C	intronic	MTMR14	NA	NA	NA	intronic	ENSG00000163719	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs787836	0.2	0.2	0.188	0.178115	0.1859	0.377	0.1066	0.059	0.1769	0.19	0.41	0.12	0.06	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.787375	NA	NA	0.17379	0.068642	NA	0.159	NA	3.64031
1288	13	103286474	103286474	C	T	intronic	TPP2	NA	NA	NA	intronic	ENSG00000134900	NA	NA	NA	NA	NA	13q33.1	NA	NA	NA	NA	rs58545410	0.16	0.16	0.149	0.169529	0.1362	0.1349	0.1081	0.2761	0.1391	0.13	0.13	0.13	0.29	0.1208	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.068184	NA	NA	0.102791	0.249887	NA	0.159	NA	3.640209
1288	12	124158455	124158455	T	C	intronic	TCTN2	NA	NA	NA	intronic	ENSG00000168778	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs7953599	0.27	0.27	0.243	0.271765	0.3598	0.0565	0.2291	0.3949	0.2669	0.36	0.05	0.25	0.38	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.636405	NA	NA	NA	NA	NA	0.217	NA	3.6402
1288	17	41996733	41996733	G	T	intergenic	FAM215A,PPY	dist=1378;dist=21439	NA	NA	ncRNA_intronic	ENSG00000267166	NA	NA	NA	NA	NA	17q21.31	NA	NA	NA	NA	rs231457	0.58	0.58	0.612	0.588259	0.3598	0.8244	0.5836	0.5356	0.6544	0.37	0.87	0.55	0.59	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.353631	NA	NA	NA	NA	NA	0.507	NA	3.6402
1288	17	72245629	72245629	A	G	intronic	TTYH2	NA	NA	NA	intronic	ENSG00000141540	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs1870993	0.38	0.38	0.378	0.409145	0.3598	0.1101	0.3156	0.7398	0.3875	0.37	0.12	0.31	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.431028	NA	NA	NA	NA	NA	0.435	NA	3.6402
1288	22	30034994	30034994	G	T	intronic	NF2	NA	NA	NA	intronic	ENSG00000186575	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs5763378	0.29	0.29	0.276	0.334065	0.3598	0.2123	0.4597	0.2216	0.4959	0.36	0.21	0.39	0.22	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.392945	NA	NA	NA	NA	NA	0.254	NA	3.6402
1288	13	20025406	20025406	C	T	intronic	TPTE2	NA	NA	NA	intronic	ENSG00000132958	NA	NA	NA	NA	NA	13q12.11	NA	NA	NA	NA	rs2497236	0.13	0.13	0.121	0.120407	0.1272	0.0407	0.1455	0.1929	0.0798	0.11	0.02	0.19	0.23	0.1126	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.455977	NA	NA	0.120144	0.17567	NA	0.087	NA	3.640056
1288	13	103286280	103286280	T	A	intronic	TPP2	NA	NA	NA	intronic	ENSG00000134900	NA	NA	NA	NA	NA	13q33.1	NA	NA	NA	NA	rs2274461	0.16	0.16	0.165	0.169529	0.1362	0.1349	0.1081	0.2761	0.1391	0.13	0.13	0.13	0.29	0.121	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.360303	NA	NA	0.102791	0.249887	NA	0.159	NA	3.640009
1288	1	95615888	95615888	T	C	intronic	TMEM56,TMEM56-RWDD3	NA	NA	NA	intronic	ENSG00000152078,ENSG00000271092	NA	NA	NA	NA	NA	1p21.3	NA	NA	NA	NA	rs35206271	0.14	0.14	0.142	0.128594	0.1819	0.0694	0.1571	0.1142	0.1339	0.19	0.08	0.17	0.12	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.650142	NA	NA	0.17819	0.117775	NA	0.116	NA	3.63991
1288	12	1038854	1038854	C	T	intronic	RAD52	NA	NA	NA	intronic	ENSG00000002016	NA	NA	NA	NA	NA	12p13.33	NA	NA	NA	NA	rs11571424	0.09	0.09	0.098	0.0926518	0.1252	0.1012	0.0663	0.0333	0.1493	0.13	0.1	0.08	0.04	0.1091	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.922599	NA	NA	0.125816	0.045662	ID=COSN164108;OCCURENCE=1(NS)	0.174	NA	3.639884
1288	4	960331	960331	C	G	intronic	DGKQ	NA	NA	NA	intronic	ENSG00000145214	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs11248059	0.09	0.09	0.084	0.105032	0.1193	0.1181	0.0605	0.0197	0.2239	0.13	0.11	0.05	0.02	0.1268	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.060801	NA	NA	0.114123	0.026818	NA	0.043	NA	3.639777
1288	17	63533423	63533423	C	A	intronic	AXIN2	NA	NA	NA	intronic	ENSG00000168646	NA	NA	NA	NA	NA	17q24.1	NA	NA	NA	NA	rs7219582	0.15	0.15	0.158	0.174121	0.1252	0.1062	0.0965	0.2965	0.184	0.11	0.1	0.13	0.29	0.1219	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.954238	NA	NA	0.113372	0.243759	NA	0.123	NA	3.639528
1288	11	59211265	59211265	T	C	exonic	OR5A1	NA	synonymous SNV	OR5A1:NM_001004728:exon1:c.T624C:p.T208T	exonic	ENSG00000172320	NA	synonymous SNV	ENSG00000172320:ENST00000302030:exon1:c.T624C:p.T208T	NA	NA	11q12.1	NA	NA	NA	NA	rs7941591	0.62	0.62	0.624	0.635383	0.6938	0.7609	0.5836	0.4433	0.7423	0.68	0.73	0.57	0.46	0.66	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.536342	NA	NA	0.673458	0.479328	NA	0.652	NA	3.6394086
1288	7	38860933	38860933	A	G	intronic	VPS41	NA	NA	NA	intronic	ENSG00000006715	NA	NA	NA	NA	NA	7p14.1	NA	NA	NA	NA	rs56002981	0.28	0.28	0.254	0.33726	0.1809	0.4385	0.2983	0.2927	0.4816	0.19	0.44	0.3	0.24	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.373093	NA	NA	0.179761	0.28685	NA	0.254	NA	3.639339
1288	19	43876994	43876994	T	G	intergenic	CD177,TEX101	dist=9514;dist=15769	NA	NA	ncRNA_exonic	ENSG00000204933	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs10404822	0.4	0.4	0.318	0.414736	0.3608	0.5704	0.4121	0.2526	0.5307	0.37	0.55	0.38	0.28	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.741753	NA	0.27	NA	NA	NA	0.449	NA	3.6392
1288	19	43877001	43877001	A	G	intergenic	CD177,TEX101	dist=9521;dist=15762	NA	NA	ncRNA_exonic	ENSG00000204933	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs10403027	0.4	0.4	0.343	0.414736	0.3608	0.5704	0.4121	0.2526	0.5307	0.37	0.56	0.38	0.28	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.47544	NA	0.34	NA	NA	NA	0.449	NA	3.6392
1288	8	28876221	28876221	T	C	intronic	HMBOX1	NA	NA	NA	intronic	ENSG00000147421	NA	NA	NA	NA	NA	8p12	NA	NA	NA	NA	rs7837237	0.39	0.39	0.423	0.448882	0.3608	0.3403	0.2954	0.6604	0.4744	0.37	0.31	0.31	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.469809	NA	NA	NA	NA	NA	0.507	NA	3.6392
1288	10	81067480	81067480	C	G	intronic	ZMIZ1	NA	NA	NA	intronic	ENSG00000108175	NA	NA	NA	NA	NA	10q22.3	NA	NA	NA	NA	rs1972346	0.3	0.3	0.291	0.283347	0.3608	0.4236	0.2795	0.0219	0.4151	0.35	0.49	0.3	0.03	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.635674	NA	NA	NA	NA	NA	0.312	NA	3.6392
1288	11	62064841	62064841	T	C	intronic	SCGB1D4	NA	NA	NA	intronic	ENSG00000197745	NA	NA	NA	NA	NA	11q12.3	NA	NA	NA	NA	rs4477443	0.28	0.28	0.25	0.281749	0.3608	0.3423	0.2853	0.0787	0.41	0.35	0.33	0.3	0.1	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.338498	NA	NA	NA	NA	NA	0.319	NA	3.6392
1288	11	62064844	62064844	G	C	intronic	SCGB1D4	NA	NA	NA	intronic	ENSG00000197745	NA	NA	NA	NA	NA	11q12.3	NA	NA	NA	NA	rs4280004	0.28	0.28	0.249	0.281749	0.3608	0.3423	0.2853	0.0787	0.41	0.35	0.33	0.3	0.1	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.436416	NA	NA	NA	NA	NA	0.319	NA	3.6392
1288	12	1983744	1983744	T	C	intronic	CACNA2D4	NA	NA	NA	intronic	ENSG00000151062	NA	NA	NA	NA	NA	12p13.33	NA	NA	NA	NA	rs737102	0.19	0.19	0.207	0.221446	0.1143	0.0456	0.0893	0.5348	0.183	0.11	0.06	0.11	0.52	0.1395	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.374013	NA	NA	0.107048	0.433217	NA	0.152	NA	3.639152
1288	2	43805608	43805608	C	G	intronic	THADA	NA	NA	NA	intronic	ENSG00000115970	NA	NA	NA	NA	NA	2p21	NA	NA	NA	NA	rs6759861	0.1	0.1	0.105	0.1248	0.1064	0.0069	0.0764	0.2322	0.1544	0.11	0.01	0.09	0.22	0.1207	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.613188	NA	NA	0.134093	0.192245	NA	0.109	NA	3.638807
1288	13	23853468	23853468	A	G	intronic	SGCG	NA	NA	NA	intronic	ENSG00000102683	NA	NA	NA	NA	NA	13q12.12	NA	NA	NA	NA	rs66844808	0.07	0.07	0.069	0.0628994	0.1382	NA	0.1023	0.0552	0.0327	0.12	NA	0.09	0.07	0.0964	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.365034	1.365034	NA	0.12686	0.088062	NA	0.181	NA	3.63854
1288	8	119945166	119945166	G	A	intronic	TNFRSF11B	NA	NA	NA	intronic	ENSG00000164761	NA	NA	NA	NA	NA	8q24.12	NA	NA	NA	NA	rs1564858	0.07	0.07	0.068	0.0788738	0.1213	0.0069	0.0663	0.0461	0.1626	0.13	0.0017	0.08	0.05	0.1096	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.856362	NA	NA	0.130698	0.056514	NA	0.116	NA	3.638402
1288	3	184297129	184297129	T	C	intronic	EPHB3	NA	NA	NA	intronic	ENSG00000145191,ENSG00000182580	NA	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs6771138	0.33	0.33	0.355	0.336262	0.3618	0.1687	0.2565	0.5484	0.2526	0.34	0.17	0.3	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.282042	NA	NA	NA	NA	NA	0.37	NA	3.6382
1288	4	55971846	55971846	G	T	intronic	KDR	NA	NA	NA	intronic	ENSG00000128052	NA	NA	NA	NA	NA	4q12	NA	NA	NA	NA	rs2305945	0.37	0.37	0.312	0.343251	0.3618	0.3135	0.5159	0.2935	0.2996	0.38	0.34	0.54	0.29	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.869621	NA	NA	NA	NA	NA	0.377	NA	3.6382
1288	7	138188932	138188932	A	G	intronic	TRIM24	NA	NA	NA	intronic	ENSG00000122779	NA	NA	NA	NA	NA	7q33	NA	NA	NA	NA	rs10488642	0.28	0.28	0.275	0.248802	0.3618	0.001	0.2637	0.4304	0.1319	0.37	NA	0.31	0.46	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.528368	NA	NA	NA	NA	NA	0.283	NA	3.6382
1288	10	124389296	124389296	C	G	intronic	DMBT1	NA	NA	NA	intronic	ENSG00000187908	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs3013177	0.57	0.57	0.588	0.61901	0.3618	0.6736	0.4669	0.8691	0.5971	0.35	0.66	0.47	0.87	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.336792	NA	NA	NA	NA	NA	0.652	NA	3.6382
1288	16	19883082	19883082	A	G	intronic	GPRC5B	NA	NA	NA	intronic	ENSG00000167191	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs172907	0.37	0.37	0.376	0.32488	0.3618	0.3323	0.2738	0.4561	0.138	0.36	0.34	0.28	0.48	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.918239	NA	NA	NA	NA	NA	0.493	NA	3.6382
1288	16	32823536	32823536	A	G	intergenic	TP53TG3,SLC6A10P	dist=136088;dist=65261	NA	NA	ncRNA_intronic	ENSG00000260158	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs79574195	NA	NA	0.285	0.405751	0.3618	0.3562	0.2608	0.5174	0.454	NA	NA	NA	NA	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.056698	NA	NA	NA	NA	NA	0.029	NA	3.6382
1288	17	26096473	26096473	C	A	intronic	NOS2	NA	NA	NA	intronic	ENSG00000007171	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs9282801	0.29	0.29	0.273	0.291933	0.3618	0.1935	0.2723	0.2769	0.3558	0.36	0.17	0.32	0.3	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.335652	NA	NA	NA	NA	NA	0.348	NA	3.6382
1288	22	42190309	42190309	A	G	intronic	MEI1	NA	NA	NA	intronic	ENSG00000167077	NA	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs738247	0.29	0.29	0.29	0.280551	0.3618	0.2589	0.2205	0.2057	0.363	0.37	0.28	0.24	0.22	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.459577	NA	NA	NA	NA	NA	0.239	NA	3.6382
1288	13	113839747	113839747	C	T	intronic	PCID2	NA	NA	NA	intronic	ENSG00000126226	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs515863	0.1	0.1	0.089	0.111422	0.1819	0.003	0.1167	0.0628	0.2127	0.17	0.0035	0.14	0.06	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.42168	NA	NA	0.179927	0.080995	NA	0.174	NA	3.638173
1288	21	10920041	10920041	C	T	intronic	TPTE	NA	NA	NA	intronic	ENSG00000166157	NA	NA	NA	NA	NA	21p11.1	NA	NA	NA	NA	rs4913553	0.35	0.35	0.278	NA	NA	NA	NA	NA	NA	0.32	0.38	0.37	0.36	0.3619	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.059857	NA	NA	NA	NA	NA	0.123	NA	3.6381
1288	3	53910118	53910118	A	G	intronic	ACTR8	NA	NA	NA	intronic	ENSG00000113812	NA	NA	NA	NA	NA	3p21.1	NA	NA	NA	NA	rs744277	NA	NA	NA	0.00778754	0.001	NA	0.0058	0.0204	0.0072	NA	NA	NA	NA	0.3615	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.008264	NA	NA	NA	NA	NA	0.399	NA	3.6375
1288	2	136546110	136546110	A	G	exonic	LCT	NA	synonymous SNV	LCT:NM_002299:exon17:c.T5568C:p.A1856A	exonic	ENSG00000115850	NA	synonymous SNV	ENSG00000115850:ENST00000264162:exon17:c.T5568C:p.A1856A	NA	NA	2q21.3	NA	NA	NA	NA	rs2278544	0.49	0.49	0.465	0.441494	0.6561	0.4395	0.4784	0.2912	0.3998	0.67	0.45	0.51	0.25	0.6215	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.321075	NA	NA	0.75186	0.393554	NA	0.536	NA	3.6372066
1288	1	10435170	10435170	T	C	intronic	KIF1B	NA	NA	NA	intronic	ENSG00000054523	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs11121551	0.36	0.36	0.343	0.341054	0.3628	0.3472	0.3833	0.3351	0.2904	0.36	0.37	0.4	0.34	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.172617	NA	NA	NA	NA	ID=COSN162932;OCCURENCE=1(NS)	0.319	NA	3.6372
1288	2	98353847	98353847	C	T	intronic	ZAP70	NA	NA	NA	intronic	ENSG00000115085	NA	NA	NA	NA	NA	2q11.2	NA	NA	NA	NA	rs11686881	0.23	0.23	0.158	0.182708	0.3628	0.0972	0.3285	0.0862	0.1125	0.38	0.1	0.34	0.08	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.045216	NA	NA	NA	NA	NA	0.188	NA	3.6372
1288	3	195953775	195953775	C	T	intronic	SLC51A	NA	NA	NA	intronic	ENSG00000161217,ENSG00000163959	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs68119320	0.47	0.47	0.451	0.462859	0.3628	0.8552	0.428	0.1891	0.5562	0.36	0.86	0.44	0.19	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.043881	NA	NA	NA	NA	NA	0.362	NA	3.6372
1288	8	121353692	121353692	A	T	intronic	COL14A1	NA	NA	NA	intronic	ENSG00000187955	NA	NA	NA	NA	NA	8q24.12	NA	NA	NA	NA	rs1563392	0.48	0.48	0.491	0.483027	0.3628	0.4385	0.4337	0.6732	0.4305	0.35	0.47	0.42	0.72	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.037837	NA	NA	NA	NA	NA	0.449	NA	3.6372
1288	12	52712813	52712813	A	G	intronic	KRT83	NA	NA	NA	intronic	ENSG00000170523	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs998821	0.33	0.33	0.342	0.349241	0.3628	0.1677	0.2493	0.5076	0.3793	0.36	0.16	0.29	0.52	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.541911	NA	NA	NA	NA	NA	0.428	NA	3.6372
1288	12	52864756	52864756	C	G	intronic	KRT6C	NA	NA	NA	intronic	ENSG00000170465	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs613760	0.35	0.35	0.316	0.286741	0.3628	0.4821	0.281	0.152	0.1933	0.36	0.56	0.33	0.1	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.610023	NA	NA	NA	NA	NA	0.326	NA	3.6372
1288	12	52864843	52864843	G	A	intronic	KRT6C	NA	NA	NA	intronic	ENSG00000170465	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs604303	0.33	0.33	0.273	0.249401	0.3628	0.4772	0.2651	0.0242	0.1912	0.36	0.56	0.32	0.04	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.041345	NA	NA	NA	NA	NA	0.065	NA	3.6372
1288	15	84958078	84958078	C	T	intergenic	GOLGA6L4,DNM1P41	dist=43958;dist=87728	NA	NA	ncRNA_exonic	ENSG00000235370	NA	NA	NA	NA	NA	15q25.2	NA	NA	NA	NA	rs8034390	0.56	0.56	0.551	0.586861	0.3628	0.6508	0.572	0.7844	0.4949	0.36	0.65	0.52	0.8	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.679195	NA	NA	NA	NA	NA	0.493	NA	3.6372
1288	16	33413939	33413939	T	G	intergenic	LOC390705,RNU6-76P	dist=115237;dist=49568	NA	NA	ncRNA_intronic	ENSG00000259882	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs7201913	NA	NA	0.613	0.433706	0.3628	0.4018	0.3256	0.5484	0.4611	NA	NA	NA	NA	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.084748	NA	NA	NA	NA	NA	0.21	NA	3.6372
1288	19	18709768	18709768	G	A	intronic	CRLF1	NA	NA	NA	intronic	ENSG00000006016	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs8108207	0.36	0.36	0.38	0.36242	0.3628	0.0962	0.2118	0.7345	0.2403	0.36	0.08	0.25	0.77	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.627916	NA	NA	NA	NA	NA	0.391	NA	3.6372
1288	19	38090759	38090759	C	G	intronic	ZNF540	NA	NA	NA	intronic	ENSG00000171817	NA	NA	NA	NA	NA	19q13.12	NA	NA	NA	NA	rs17305228	0.2	0.2	0.196	0.185104	0.3628	0.0288	0.2651	0.1021	0.2188	0.37	0.04	0.26	0.09	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.442848	NA	NA	NA	NA	NA	0.319	NA	3.6372
1288	8	119938725	119938725	T	G	intronic	TNFRSF11B	NA	NA	NA	intronic	ENSG00000164761	NA	NA	NA	NA	NA	8q24.12	NA	NA	NA	NA	rs7844539	0.07	0.07	0.067	0.0780751	0.1223	0.0069	0.0648	0.0446	0.1605	0.13	0.0017	0.07	0.04	0.1087	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.148878	NA	NA	0.132356	0.054925	NA	0.116	NA	3.636644
1288	11	102573451	102573451	T	C	intronic	MMP27	NA	NA	NA	intronic	ENSG00000137675	NA	NA	NA	NA	NA	11q22.2	NA	NA	NA	NA	rs3809017	0.19	0.19	0.197	0.216454	0.1054	0.2252	0.1556	0.3449	0.1912	0.1	0.22	0.16	0.33	0.1519	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.298145	NA	NA	0.106071	0.300953	NA	0.196	NA	3.636629
1288	6	129937456	129937456	A	G	intronic	ARHGAP18	NA	NA	NA	intronic	ENSG00000146376	NA	NA	NA	NA	NA	6q22.33	NA	NA	NA	NA	rs12524078	0.07	0.07	0.051	0.0521166	0.1481	NA	0.1052	0.0045	0.0337	0.14	NA	0.12	0.02	0.1101	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.186535	NA	NA	0.105465	0.020881	NA	0.072	NA	3.636335
1288	1	1647928	1647928	A	G	intronic	CDK11A,CDK11B	NA	NA	NA	ncRNA_intronic	ENSG00000268575	NA	NA	NA	NA	NA	1p36.33	NA	NA	NA	NA	rs1883424	0.27	0.27	0.272	0.347444	0.3986	0.5357	0.4366	0.0545	0.4335	0.31	0.38	0.33	0.05	0.2984	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.499961	NA	NA	NA	NA	NA	0.254	NA	3.6363333
1288	1	201016646	201016646	C	T	intronic	CACNA1S	NA	NA	NA	intronic	ENSG00000081248	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs2297905	0.17	0.17	0.181	0.171925	0.1034	0.1141	0.0951	0.3971	0.0521	0.11	0.12	0.1	0.38	0.1345	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.223362	NA	NA	0.125814	0.360191	NA	0.196	NA	3.636286
1288	3	75419736	75419736	T	G	intergenic	MIR4444-1,FAM86DP	dist=156037;dist=50967	NA	NA	ncRNA_exonic	ENSG00000230655	NA	NA	NA	NA	NA	3p12.3	NA	NA	NA	NA	rs2091866	0.25	0.25	0.235	0.251198	0.3638	0.0764	0.3631	0.239	0.2526	0.37	0.05	0.34	0.23	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.149974	NA	NA	NA	NA	NA	0.254	NA	3.6362
1288	7	138200210	138200210	T	C	intronic	TRIM24	NA	NA	NA	intronic	ENSG00000122779	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs68115887	0.29	0.29	0.318	0.249601	0.3638	0.001	0.2608	0.4327	0.1329	0.37	NA	0.31	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.102045	NA	NA	NA	NA	NA	0.297	NA	3.6362
1288	8	59499237	59499237	G	A	intronic	NSMAF	NA	NA	NA	intronic	ENSG00000035681	NA	NA	NA	NA	NA	8q12.1	NA	NA	NA	NA	rs3816846	0.25	0.25	0.247	0.256989	0.3638	0.3204	0.1844	0.0885	0.3609	0.34	0.27	0.23	0.1	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3062	NA	NA	NA	NA	NA	0.174	NA	3.6362
1288	19	54849566	54849566	T	C	intronic	LILRA4	NA	NA	NA	intronic	ENSG00000239961	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs2241385	0.36	0.36	0.37	0.405152	0.3638	0.2639	0.4323	0.5045	0.4397	0.35	0.26	0.41	0.46	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.14432	NA	NA	NA	NA	NA	0.399	NA	3.6362
1288	11	77583376	77583376	G	A	UTR3	AAMDC	NM_024684:c.*15G>A	NA	NA	UTR3	ENSG00000087884	ENST00000526415:c.*15G>A,ENST00000393427:c.*15G>A,ENST00000525409:c.*15G>A,ENST00000533193:c.*15G>A,ENST00000525034:c.*15G>A	NA	NA	NA	NA	11q14.1	NA	NA	NA	NA	rs588217	0.18	0.18	0.161	0.186701	0.2425	0.0913	0.17	0.2012	0.2198	0.23	0.1	0.2	0.17	0.2173	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.707238	NA	NA	0.237418	0.213864	NA	0.239	NA	3.6361154
1288	5	149459574	149459574	C	T	intronic	CSF1R	NA	NA	NA	intronic	ENSG00000182578	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs13188584	0.12	0.12	0.126	0.122804	0.1233	0.1409	0.098	0.1089	0.1401	0.12	0.11	0.1	0.13	0.1204	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.494715	NA	NA	0.120349	0.118929	NA	0.174	NA	3.635951
1288	20	6093116	6093116	A	G	intronic	FERMT1	NA	NA	NA	intronic	ENSG00000101311	NA	NA	NA	NA	NA	20p12.3	NA	NA	NA	NA	rs41308641	0.07	0.07	0.062	0.0621006	0.1392	0.002	0.1268	0.0076	0.0726	0.14	NA	0.14	0.01	0.0956	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.668941	NA	NA	0.129302	0.030413	NA	0.072	NA	3.635898
1288	6	32798350	32798350	A	C	intronic	TAP2	NA	NA	NA	intronic	ENSG00000204267,ENSG00000250264	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs9380327	0.1	0.1	0.072	0.0894569	0.1262	0.0962	0.1095	0.0567	0.0746	0.12	0.1	0.12	0.05	0.1127	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.592806	NA	NA	0.125416	0.077483	NA	0.065	NA	3.635684
1288	6	13288737	13288737	T	A	intronic	LOC100130357	NA	NA	NA	ncRNA_intronic	ENSG00000215022	NA	NA	NA	NA	NA	6p24.1	NA	NA	NA	NA	rs202036	0.69	0.69	0.715	0.681909	0.6978	0.4444	0.7579	0.9213	0.5327	0.69	0.46	0.76	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.472692	NA	NA	NA	NA	NA	0.71	NA	3.6355333
1288	9	117086271	117086271	T	G	intronic	ORM1	NA	NA	NA	intronic	ENSG00000229314	NA	NA	NA	NA	NA	9q32	NA	NA	NA	NA	rs10982151	0.07	0.07	0.055	0.0559105	0.1282	0.002	0.1585	0.0045	0.0337	0.12	0.0017	0.15	0.01	0.1075	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.085188	NA	NA	0.128837	0.033137	NA	0.058	NA	3.635463
1288	3	100523771	100523771	A	C	intronic	ABI3BP	NA	NA	NA	intronic	ENSG00000154175	NA	NA	NA	NA	NA	3q12.2	NA	NA	NA	NA	rs10511184	0.1	0.1	0.077	0.114417	0.166	0.0506	0.098	0.0106	0.2791	0.17	0.05	0.11	0.02	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.691746	NA	NA	0.198742	0.03396	NA	0.109	NA	3.635258
1288	19	8167590	8167590	T	C	intronic	FBN3	NA	NA	NA	intronic	ENSG00000142449	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs62126077	0.15	0.15	0.11	0.130192	0.1044	0.248	0.2579	0.0136	0.1022	0.11	0.26	0.22	0.02	0.1341	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.975948	NA	NA	0.126279	0.03291	NA	0.058	NA	3.635221
1288	1	201824390	201824390	G	A	intronic	IPO9	NA	NA	NA	intronic	ENSG00000198700	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs11576508	0.32	0.32	0.293	0.297324	0.3648	0.4177	0.3919	0.1384	0.2515	0.37	0.38	0.38	0.13	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.171685	NA	NA	NA	NA	NA	0.341	NA	3.6352
1288	2	3428508	3428508	T	G	intronic	TRAPPC12	NA	NA	NA	intronic	ENSG00000171853	NA	NA	NA	NA	NA	2p25.3	NA	NA	NA	NA	rs10166880	0.25	0.25	0.241	0.228435	0.3648	0.0764	0.2867	0.2542	0.1687	0.35	0.07	0.34	0.24	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.750288	NA	NA	NA	NA	NA	0.225	NA	3.6352
1288	2	171056569	171056569	T	A	intronic	MYO3B	NA	NA	NA	intronic	ENSG00000071909	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	rs6756347	0.32	0.32	0.349	0.342652	0.3648	0.1498	0.2421	0.5234	0.3456	0.37	0.15	0.27	0.5	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.501738	1.501738	NA	NA	NA	NA	0.312	NA	3.6352
1288	4	39318706	39318706	A	G	intronic	RFC1	NA	NA	NA	intronic	ENSG00000035928	NA	NA	NA	NA	NA	4p14	NA	NA	NA	NA	rs2066790	0.28	0.28	0.273	0.28115	0.3648	0.1776	0.2565	0.3064	0.2853	0.35	0.18	0.24	0.31	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.226047	NA	NA	NA	NA	NA	0.261	NA	3.6352
1288	6	168947956	168947956	G	C	intronic	SMOC2	NA	NA	NA	intronic	ENSG00000112562	NA	NA	NA	NA	NA	6q27	NA	NA	NA	NA	rs10806685	0.39	0.39	0.367	0.355032	0.3648	0.6944	0.4337	0.0817	0.3088	0.37	0.65	0.42	0.09	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.468051	NA	NA	NA	NA	NA	0.413	NA	3.6352
1288	7	64291622	64291622	C	T	intronic	ZNF138	NA	NA	NA	intronic	ENSG00000197008	NA	NA	NA	NA	NA	7q11.21	NA	NA	NA	NA	rs1880656	0.26	0.26	0.223	0.238818	0.3648	0.1617	0.3314	0.1165	0.2883	0.35	0.18	0.35	0.12	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.643937	NA	NA	NA	NA	ID=COSN168096;OCCURENCE=1(large_intestine)	0.362	NA	3.6352
1288	8	95782864	95782864	A	G	intronic	DPY19L4	NA	NA	NA	intronic	ENSG00000156162	NA	NA	NA	NA	NA	8q22.1	NA	NA	NA	NA	rs13250360	0.41	0.41	0.376	0.430911	0.3648	0.2183	0.3876	0.7882	0.2658	0.35	0.22	0.37	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.713604	NA	NA	NA	NA	NA	0.355	NA	3.6352
1288	10	95346879	95346879	C	G	intronic	FFAR4	NA	NA	NA	intronic	ENSG00000186188	NA	NA	NA	NA	NA	10q23.33	NA	NA	NA	NA	rs11187538	0.32	0.32	0.316	0.337859	0.3648	0.1052	0.255	0.4864	0.408	0.36	0.1	0.28	0.53	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.457545	NA	NA	NA	NA	NA	0.522	NA	3.6352
1288	11	89372524	89372524	T	C	intergenic	NOX4,FOLH1B	dist=49745;dist=19941	NA	NA	ncRNA_intronic	ENSG00000134612	NA	NA	NA	NA	NA	11q14.3	NA	NA	NA	NA	rs7945304	0.24	0.24	0.193	0.215056	0.3648	0.0873	0.2277	0.1513	0.2699	0.37	0.09	0.28	0.17	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.787526	NA	NA	NA	NA	NA	0.239	NA	3.6352
1288	12	52865592	52865592	A	T	intronic	KRT6C	NA	NA	NA	intronic	ENSG00000170465	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs644414	NA	NA	0.174	0.250799	0.3648	0.4812	0.2651	0.025	0.1912	NA	NA	NA	NA	NA	0.098	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.683865	NA	NA	NA	NA	NA	0.152	NA	3.6352
1288	13	28136989	28136989	A	G	intronic	LNX2	NA	NA	NA	intronic	ENSG00000139517	NA	NA	NA	NA	NA	13q12.2	NA	NA	NA	NA	rs11838661	0.28	0.28	0.289	0.282149	0.3648	0.0813	0.2363	0.3896	0.2914	0.36	0.07	0.27	0.4	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.909471	NA	NA	NA	NA	NA	0.232	NA	3.6352
1288	11	118898319	118898319	G	A	intronic	SLC37A4	NA	NA	NA	intronic	ENSG00000137700	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs741811	0.09	0.09	0.071	0.077476	0.1282	0.0159	0.1297	0.059	0.0767	0.13	0.01	0.14	0.07	0.1057	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.528184	NA	NA	0.130989	0.0848	NA	0.116	NA	3.635111
1289	3	185135448	185135448	G	A	intronic	MAP3K13	NA	NA	NA	ncRNA_exonic	ENSG00000229638	NA	NA	NA	NA	NA	3q27.2	NA	NA	NA	NA	rs13099317	0.56	0.56	0.541	0.504393	0.6988	0.4593	0.5778	0.3714	0.4785	0.68	0.52	0.6	0.4	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.687507	1.687507	NA	NA	NA	NA	0.457	NA	3.6345333
1289	1	228412106	228412106	T	C	intronic	OBSCN	NA	NA	NA	intronic	ENSG00000154358	NA	NA	NA	NA	NA	1q42.13	NA	NA	NA	NA	rs1771482	0.42	0.42	0.395	0.412141	0.3658	0.3839	0.402	0.5885	0.2577	0.37	0.37	0.43	0.57	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.148049	NA	NA	NA	NA	NA	0.464	NA	3.6342
1289	3	124165217	124165217	G	A	intronic	KALRN	NA	NA	NA	intronic	ENSG00000160145	NA	NA	NA	NA	NA	3q21.2	NA	NA	NA	NA	rs624450	0.37	0.37	0.319	0.392173	0.3658	0.3125	0.3141	0.5	0.411	0.35	0.29	0.33	0.5	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.196315	NA	NA	NA	NA	NA	0.413	NA	3.6342
1289	5	178989473	178989473	T	G	intronic	RUFY1	NA	NA	NA	intronic	ENSG00000176783	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs28510162	0.48	0.48	0.452	0.48143	0.3658	0.7312	0.5058	0.3722	0.4734	0.35	0.74	0.49	0.39	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.775404	NA	NA	NA	NA	NA	0.406	NA	3.6342
1289	7	64275851	64275851	C	T	intronic	ZNF138	NA	NA	NA	intronic	ENSG00000197008	NA	NA	NA	NA	NA	7q11.21	NA	NA	NA	NA	rs55683815	0.24	0.24	0.203	0.21845	0.3658	0.1587	0.3213	0.0446	0.2904	0.35	0.18	0.34	0.04	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.318195	NA	NA	NA	NA	ID=COSN168095;OCCURENCE=1(large_intestine)	0.304	NA	3.6342
1289	8	141310486	141310486	A	G	intronic	TRAPPC9	NA	NA	NA	intronic	ENSG00000167632	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs12156047	0.26	0.26	0.238	0.223442	0.3658	0.0109	0.2536	0.3011	0.1697	0.38	0.02	0.28	0.33	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.014198	NA	NA	NA	NA	NA	0.261	NA	3.6342
1289	9	96425363	96425363	G	A	intronic	PHF2	NA	NA	NA	intronic	ENSG00000197724	NA	NA	NA	NA	NA	9q22.31	NA	NA	NA	NA	rs3750359	0.26	0.26	0.236	0.198283	0.3658	0.2917	0.268	0.0174	0.1247	0.37	0.3	0.28	0.03	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.78984	NA	NA	NA	NA	NA	0.283	NA	3.6342
1289	11	118942638	118942638	A	C	intronic	VPS11	NA	NA	NA	intronic	ENSG00000160695	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs1614264	0.4	0.4	0.415	0.438898	0.3658	0.2262	0.3746	0.7057	0.4182	0.35	0.2	0.41	0.72	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.243117	1.243117	NA	NA	NA	NA	0.493	NA	3.6342
1289	16	84485423	84485423	G	A	intronic	ATP2C2	NA	NA	NA	intronic	ENSG00000064270	NA	NA	NA	NA	NA	16q24.1	NA	NA	NA	NA	rs247886	0.35	0.35	0.324	0.351837	0.3658	0.2778	0.2767	0.466	0.3129	0.38	0.26	0.31	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.246033	NA	NA	NA	NA	NA	0.326	NA	3.6342
1289	19	23413937	23413937	A	G	ncRNA_intronic	ZNF724P	NA	NA	NA	UTR3	ENSG00000196081	ENST00000597037:c.*123T>C	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs7256859	0.86	0.86	0.833	0.872204	0.8658	0.876	0.8646	0.8207	0.9499	0.87	0.88	0.86	0.81	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.484355	NA	NA	NA	NA	NA	0.841	NA	3.6342
1289	10	129681917	129681917	A	C	intronic	CLRN3	NA	NA	NA	intronic	ENSG00000180745	NA	NA	NA	NA	NA	10q26.2	NA	NA	NA	NA	rs72845049	0.06	0.06	0.054	0.0435304	0.1252	NA	0.0735	0.0076	0.0317	0.11	NA	0.09	0.01	0.0992	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.228595	NA	NA	0.141512	0.022696	NA	0.072	NA	3.634088
1289	21	10920067	10920067	T	C	intronic	TPTE	NA	NA	NA	intronic	ENSG00000166157	NA	NA	NA	NA	NA	21p11.1	NA	NA	NA	NA	rs4913681	0.36	0.36	0.275	NA	NA	NA	NA	NA	NA	0.32	0.38	0.38	0.38	0.366	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.552569	NA	NA	NA	NA	NA	0.275	NA	3.634
1289	3	97851475	97851475	G	C	upstream	OR5H1	NA	NA	NA	ncRNA_intronic	ENSG00000249225	NA	NA	NA	NA	NA	3q11.2	NA	NA	NA	NA	rs4857328	0.62	0.62	0.637	0.624201	0.5328	0.5228	0.585	0.8366	0.5634	0.54	0.58	0.54	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.110508	NA	NA	NA	NA	NA	0.565	NA	3.6338666
1289	16	88779865	88779865	G	A	intronic	CTU2	NA	NA	NA	intronic	ENSG00000174177	NA	NA	NA	NA	NA	16q24.3	NA	NA	NA	NA	rs4782320	0.07	0.07	0.076	0.0427316	0.1302	NA	0.0375	0.0348	0.0112	0.15	NA	0.04	0.05	0.0995	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.750304	NA	NA	0.136438	0.043607	NA	0.036	NA	3.633862
1289	1	200969766	200969766	G	A	intronic	KIF21B	NA	NA	NA	intronic	ENSG00000116852	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs6692235	0.17	0.17	0.165	0.177316	0.1024	0.1022	0.0793	0.4327	0.0562	0.1	0.1	0.08	0.39	0.1367	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.687958	NA	NA	0.127093	0.393733	NA	0.174	NA	3.633807
1289	7	45223018	45223018	C	G	UTR3	RAMP3	NM_005856:c.*7C>G	NA	NA	UTR3	ENSG00000122679	ENST00000242249:c.*7C>G,ENST00000481345:c.*7C>G	NA	NA	NA	NA	7p13	NA	NA	NA	NA	rs11982639	0.25	0.25	0.286	0.273363	0.2366	0.12	0.1888	0.4584	0.2791	0.22	0.11	0.19	0.48	0.2377	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.982361	NA	NA	0.225465	0.416024	NA	0.319	NA	3.6335684
1289	7	154645406	154645406	A	G	intronic	DPP6	NA	NA	NA	ncRNA_intronic	ENSG00000236408	NA	NA	NA	NA	NA	7q36.2	NA	NA	NA	NA	rs6962284	0.73	0.73	0.697	0.69349	0.6998	0.9692	0.6225	0.556	0.6391	0.69	0.97	0.65	0.57	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.866612	NA	NA	NA	NA	NA	0.594	NA	3.6335333
1289	10	106039303	106039303	A	G	intronic	GSTO2	NA	NA	NA	intronic	ENSG00000065621	NA	NA	NA	NA	NA	10q25.1	NA	NA	NA	NA	rs276203	0.43	0.43	0.481	0.440495	0.3668	0.255	0.2752	0.8048	0.3323	0.36	0.27	0.31	0.81	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.04999	NA	NA	NA	NA	NA	0.413	NA	3.6332
1289	11	124677941	124677941	C	T	intergenic	MSANTD2,ROBO3	dist=7642;dist=57364	NA	NA	ncRNA_exonic	ENSG00000254941	NA	NA	NA	NA	NA	11q24.2	NA	NA	NA	NA	rs646521	0.39	0.39	0.382	0.421326	0.3668	0.3452	0.2522	0.6067	0.4254	0.36	0.32	0.28	0.59	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.152325	NA	NA	NA	NA	NA	0.355	NA	3.6332
1289	17	2908816	2908816	A	G	intronic	RAP1GAP2	NA	NA	NA	intronic	ENSG00000132359	NA	NA	NA	NA	NA	17p13.3	NA	NA	NA	NA	rs2289648	0.33	0.33	0.317	0.30631	0.3668	0.3343	0.2983	0.3124	0.2127	0.34	0.33	0.3	0.33	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.87931	NA	NA	NA	NA	NA	0.254	NA	3.6332
1289	17	38179275	38179275	G	T	intronic	MED24	NA	NA	NA	intronic	ENSG00000008838	NA	NA	NA	NA	NA	17q21.1	NA	NA	NA	NA	rs12451897	0.32	0.32	0.313	0.314696	0.3668	0.4226	0.4135	0.0545	0.4315	0.36	0.41	0.41	0.07	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.224823	NA	NA	NA	NA	NA	0.341	NA	3.6332
1289	17	66933003	66933003	C	T	intronic	ABCA8	NA	NA	NA	intronic	ENSG00000141338	NA	NA	NA	NA	NA	17q24.2	NA	NA	NA	NA	rs4147967	0.32	0.32	0.312	0.268171	0.3668	0.5437	0.1801	0.0295	0.2679	0.4	0.56	0.17	0.03	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.183275	NA	NA	NA	NA	NA	0.275	NA	3.6332
1289	16	56667242	56667242	T	A	intronic	MT1M	NA	NA	NA	intronic	ENSG00000205364	NA	NA	NA	NA	NA	16q12.2	NA	NA	NA	NA	rs55963173	0.07	0.07	0.061	0.0790735	0.1213	0.0139	0.098	0.062	0.1125	0.13	0.0035	0.09	0.06	0.1178	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.44508	NA	NA	0.128372	0.067395	NA	0.152	NA	3.632528
1289	13	34409242	34409242	T	C	intronic	RFC3	NA	NA	NA	intronic	ENSG00000133119	NA	NA	NA	NA	NA	13q13.2	NA	NA	NA	NA	rs3135628	0.28	0.28	0.277	0.307308	0.0875	0.3373	0.3415	0.4735	0.2536	0.09	0.36	0.31	0.48	0.1905	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.244111	NA	NA	0.089597	0.434151	NA	0.196	NA	3.632403
1289	1	22912865	22912865	A	G	intronic	EPHA8	NA	NA	NA	intronic	ENSG00000070886	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs537426	0.41	0.41	0.418	0.471645	0.3678	0.2708	0.379	0.6944	0.5501	0.36	0.27	0.4	0.68	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.544504	NA	NA	NA	NA	NA	0.507	NA	3.6322
1289	1	31415040	31415040	A	T	intronic	PUM1	NA	NA	NA	intronic	ENSG00000134644	NA	NA	NA	NA	NA	1p35.2	NA	NA	NA	NA	rs4949187	0.35	0.35	NA	0.345248	0.3678	0.3006	0.4697	0.2859	0.3599	0.37	0.31	0.44	0.3	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0162	NA	NA	NA	NA	NA	0.101	NA	3.6322
1289	2	44071833	44071833	A	C	intronic	ABCG8	NA	NA	NA	intronic	ENSG00000143921	NA	NA	NA	NA	NA	2p21	NA	NA	NA	NA	rs4148212	0.47	0.47	0.482	0.514976	0.3678	0.8512	0.3847	0.4175	0.544	0.37	0.81	0.32	0.36	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.3659	NA	NA	NA	NA	NA	0.362	NA	3.6322
1289	3	75420180	75420180	A	G	intergenic	MIR4444-1,FAM86DP	dist=156481;dist=50523	NA	NA	ncRNA_exonic	ENSG00000230655	NA	NA	NA	NA	NA	3p12.3	NA	NA	NA	NA	rs62259093	0.26	0.26	0.231	0.259984	0.3678	0.0804	0.3674	0.264	0.2526	0.38	0.05	0.34	0.25	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.3284	NA	NA	NA	NA	NA	0.304	NA	3.6322
1289	6	10876036	10876036	C	T	intronic	GCM2	NA	NA	NA	intronic	ENSG00000124827,ENSG00000153157,ENSG00000272162	NA	NA	NA	NA	NA	6p24.2	NA	NA	NA	NA	rs2076258	0.44	0.44	0.458	0.413738	0.3678	0.6865	0.2478	0.3661	0.362	0.37	0.68	0.26	0.38	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.266502	NA	NA	NA	NA	NA	0.616	NA	3.6322
1289	7	130023179	130023179	A	G	intronic	CPA1	NA	NA	NA	intronic	ENSG00000091704	NA	NA	NA	NA	NA	7q32.2	NA	NA	NA	NA	rs6972781	0.4	0.4	0.373	0.404553	0.3678	0.4097	0.4496	0.4894	0.2904	0.36	0.39	0.44	0.44	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.702364	NA	NA	NA	NA	NA	0.333	NA	3.6322
1289	8	64321723	64321723	C	T	intergenic	YTHDF3,LOC286184	dist=196377;dist=360265	NA	NA	ncRNA_exonic	ENSG00000215096	NA	NA	NA	NA	NA	8q12.3	NA	NA	NA	NA	rs11782289	0.37	0.37	0.401	0.330272	0.3678	0.3413	0.2795	0.357	0.2802	0.39	0.37	0.31	0.37	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.521817	NA	0.17	NA	NA	ID=COSM1180626;OCCURENCE=1(upper_aerodigestive_tract)	0.348	NA	3.6322
1289	10	55590850	55590850	G	A	intronic	PCDH15	NA	NA	NA	intronic	ENSG00000150275	NA	NA	NA	NA	NA	10q21.1	NA	NA	NA	NA	rs10825117	0.46	0.46	0.458	0.440495	0.3678	0.7232	0.4251	0.2474	0.4959	0.36	0.77	0.38	0.3	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.664884	NA	NA	NA	NA	NA	0.391	NA	3.6322
1289	10	90074145	90074145	A	G	intronic	RNLS	NA	NA	NA	intronic	ENSG00000184719	NA	NA	NA	NA	NA	10q23.31	NA	NA	NA	NA	rs11202711	0.25	0.25	0.228	0.256589	0.3678	0.1538	0.3285	0.1127	0.3916	0.38	0.18	0.29	0.12	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.474672	NA	NA	NA	NA	NA	0.333	NA	3.6322
1289	11	36669778	36669778	C	T	intronic	C11orf74	NA	NA	NA	intronic	ENSG00000166352	NA	NA	NA	NA	NA	11p12	NA	NA	NA	NA	rs1566245	0.59	0.59	0.588	0.611022	0.3678	0.7579	0.6009	0.767	0.5061	0.37	0.79	0.55	0.74	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.509656	NA	NA	NA	NA	NA	0.522	NA	3.6322
1289	12	117494543	117494543	A	G	intronic	TESC	NA	NA	NA	intronic	ENSG00000088992	NA	NA	NA	NA	NA	12q24.22	NA	NA	NA	NA	rs2173654	0.45	0.45	0.484	0.509784	0.3678	0.4365	0.2464	0.789	0.5409	0.37	0.38	0.26	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.535332	NA	NA	NA	NA	NA	0.435	NA	3.6322
1289	17	49711042	49711042	A	C	intronic	CA10	NA	NA	NA	intronic	ENSG00000154975	NA	NA	NA	NA	NA	17q21.33	NA	NA	NA	NA	rs60848939	NA	NA	NA	0.13778	0.1899	0.0347	0.1931	0.1006	0.2014	NA	NA	NA	NA	0.178	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.794425	NA	NA	NA	NA	NA	NA	NA	3.6321
1289	16	70516109	70516109	G	A	intronic	COG4	NA	NA	NA	intronic	ENSG00000103051	NA	NA	NA	NA	NA	16q22.1	NA	NA	Name=64	NA	rs12447090	0.34	0.34	0.315	0.285743	0.4841	0.4058	0.3674	0.0325	0.2423	0.49	0.38	0.4	0.03	0.4108	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.63636	NA	NA	0.473372	0.105551	NA	0.239	NA	3.631728
1289	1	200971521	200971521	G	A	intronic	KIF21B	NA	NA	NA	intronic	ENSG00000116852	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs56770229	0.16	0.16	0.163	0.175919	0.1024	0.1022	0.085	0.4236	0.0573	0.1	0.1	0.09	0.38	0.1372	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.816589	NA	NA	0.12907	0.38039	NA	0.159	NA	3.63133
1289	1	200969921	200969921	G	A	intronic	KIF21B	NA	NA	NA	intronic	ENSG00000116852	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs6692427	0.17	0.17	0.173	0.179712	0.1024	0.1022	0.085	0.4372	0.0583	0.1	0.1	0.09	0.39	0.1377	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.127894	NA	NA	0.128605	0.399001	NA	0.174	NA	3.631295
1289	12	662448	662448	T	C	exonic	B4GALNT3	NA	synonymous SNV	B4GALNT3:NM_173593:exon14:c.T1359C:p.L453L	exonic	ENSG00000139044	NA	synonymous SNV	ENSG00000139044:ENST00000322843:exon12:c.T1068C:p.L356L,ENSG00000139044:ENST00000266383:exon14:c.T1359C:p.L453L	NA	NA	12p13.33	NA	NA	NA	NA	rs758790	0.8	0.8	0.796	0.847244	0.659	0.8958	0.7968	0.944	0.8957	0.65	0.9	0.81	0.9	0.7299	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.160069	NA	NA	0.646512	0.905583	NA	0.833	NA	3.6312546
1289	17	62048707	62048707	C	T	intronic	SCN4A	NA	NA	NA	intronic	ENSG00000007314	NA	NA	NA	NA	NA	17q23.3	NA	NA	NA	NA	rs2302237	0.29	0.29	0.284	0.252796	0.3688	0.3065	0.2752	0.1074	0.2587	0.38	0.32	0.27	0.11	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.468761	NA	NA	NA	NA	NA	0.261	NA	3.6312
1289	19	36268923	36268923	C	T	intronic	ARHGAP33	NA	NA	NA	intronic	ENSG00000004777	NA	NA	NA	NA	NA	19q13.12	NA	NA	NA	NA	rs807491	0.54	0.54	0.502	0.541733	0.3688	0.631	0.5893	0.6762	0.4121	0.37	0.63	0.56	0.68	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.601369	NA	NA	NA	NA	NA	0.493	NA	3.6312
1289	7	21943722	21943722	T	C	intronic	CDCA7L	NA	NA	NA	intronic	ENSG00000164649	NA	NA	NA	NA	NA	7p15.3	NA	NA	NA	NA	rs35898649	0.09	0.09	0.085	0.0856629	0.1302	0.0496	0.0951	0.0499	0.1186	0.12	0.04	0.1	0.07	0.1123	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.369238	NA	NA	0.126512	0.058783	NA	0.051	NA	3.630988
1289	3	111719493	111719493	A	G	intronic	TAGLN3	NA	NA	NA	UTR5	ENSG00000144834	ENST00000486460:c.-198A>G	NA	NA	NA	NA	3q13.2	NA	NA	NA	NA	rs774764	0.56	0.56	0.522	0.55631	0.5358	0.5744	0.6772	0.5635	0.4632	0.53	0.55	0.64	0.56	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.004226	NA	NA	NA	NA	NA	0.522	NA	3.6308667
1289	1	200969942	200969942	A	G	intronic	KIF21B	NA	NA	NA	intronic	ENSG00000116852	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs6667956	0.17	0.17	0.168	0.180112	0.1024	0.1022	0.0865	0.438	0.0583	0.1	0.1	0.09	0.4	0.1379	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.606326	NA	NA	0.128837	0.398774	NA	0.174	NA	3.630863
1289	2	198359027	198359027	G	C	intronic	HSPD1	NA	NA	NA	intronic	ENSG00000144381	NA	NA	NA	NA	NA	2q33.1	NA	NA	NA	NA	rs7585486	0.15	0.15	0.151	0.122804	0.1978	0.2183	0.1657	0.0083	0.0716	0.19	0.23	0.17	0.01	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.484747	NA	NA	0.171392	0.036232	NA	0.065	NA	3.630808
1289	8	145737040	145737040	C	T	intronic	RECQL4	NA	NA	NA	intronic	ENSG00000160957	NA	NA	NA	NA	NA	8q24.3	NA	Name=GABP	NA	NA	rs2279243	0.38	0.38	0.316	0.393171	0.4543	0.5248	0.4957	0.0545	0.5798	0.46	0.47	0.52	0.06	0.464	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.767144	NA	NA	0.450911	0.120094	NA	0.203	NA	3.630789
1289	6	160224346	160224346	T	C	intronic	PNLDC1	NA	NA	NA	intronic	ENSG00000146453	NA	NA	NA	Score=336;Name=lod=31	NA	6q25.3	Score=894;Name=V$NKX3A_01	NA	NA	NA	rs2146163	0.74	0.74	0.717	0.764577	0.7952	0.5893	0.8761	0.7519	0.8517	0.8	0.57	0.87	0.74	0.7923	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.604626	NA	NA	0.781744	0.731502	NA	0.652	NA	3.630756
1289	2	203682304	203682304	C	G	intronic	ICA1L	NA	NA	NA	intronic	ENSG00000163596	NA	NA	NA	NA	NA	2q33.2	NA	NA	NA	NA	rs72932772	0.08	0.08	0.08	0.0505192	0.1312	0.0159	0.0764	0.0295	0.0133	0.14	0.02	0.1	0.03	0.1129	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.052047	NA	NA	0.125146	0.039292	NA	0.022	NA	3.630754
1289	11	6415392	6415392	C	T	intronic	SMPD1	NA	NA	NA	intronic	ENSG00000166311	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs11601088	0.07	0.07	0.064	0.0838658	0.1203	0.004	0.085	0.0567	0.1646	0.11	0.0035	0.1	0.09	0.1165	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.120922	NA	NA	0.132449	0.058837	NA	0.087	NA	3.630751
1289	19	16232508	16232508	A	G	intronic	RAB8A	NA	NA	NA	intronic	ENSG00000167461	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs55692650	0.14	0.14	0.142	0.141573	0.1819	0.0387	0.1153	0.1944	0.1534	0.18	0.03	0.13	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.474207	1.474207	NA	0.187465	0.163903	NA	0.174	NA	3.630635
1289	7	76069937	76069937	C	T	intronic	ZP3	NA	NA	NA	intronic	ENSG00000188372	NA	NA	NA	NA	NA	7q11.23	NA	NA	NA	NA	rs2906996	NA	NA	0.227	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3694	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.934694	NA	NA	NA	NA	NA	NA	NA	3.6306
1289	6	44144798	44144798	C	T	intronic	CAPN11	NA	NA	NA	intronic	ENSG00000137225	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs6925778	0.5	0.5	0.523	0.51857	0.3698	0.6597	0.4135	0.5787	0.5194	0.35	0.66	0.42	0.63	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.039643	NA	NA	NA	NA	NA	0.58	NA	3.6302
1289	7	64378806	64378806	C	T	intronic	ZNF273	NA	NA	NA	intronic	ENSG00000198039	NA	NA	NA	NA	NA	7q11.21	NA	NA	NA	NA	rs7796966	0.28	0.28	0.209	0.267372	0.3698	0.2778	0.3818	0.0923	0.3067	0.35	0.27	0.38	0.1	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.994485	NA	NA	NA	NA	NA	0.225	NA	3.6302
1289	15	62270765	62270765	G	A	intronic	VPS13C	NA	NA	NA	intronic	ENSG00000129003	NA	NA	NA	NA	NA	15q22.2	NA	NA	NA	NA	rs3784632	0.28	0.28	0.267	0.303714	0.3698	0.1687	0.2579	0.3086	0.4008	0.36	0.14	0.29	0.3	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.370213	NA	NA	NA	NA	NA	0.391	NA	3.6302
1289	17	8390655	8390655	C	T	intronic	MYH10	NA	NA	NA	intronic	ENSG00000133026,ENSG00000166579	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs7219356	0.41	0.41	0.409	0.409145	0.3698	0.4315	0.428	0.3729	0.4622	0.38	0.42	0.37	0.46	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.164533	NA	NA	NA	NA	NA	0.384	NA	3.6302
1289	5	96112295	96112295	C	T	intronic	ERAP1	NA	NA	NA	intronic	ENSG00000153113,ENSG00000164307	NA	NA	NA	NA	NA	5q15	NA	NA	NA	NA	rs56325109	0.08	0.08	0.046	0.0595048	0.1372	NA	0.1138	0.0053	0.0757	0.14	0.01	0.12	0.03	0.1012	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.994829	NA	NA	0.131432	0.020947	NA	0.159	NA	3.630168
1289	8	7218621	7218621	C	G	intronic	ZNF705G	NA	NA	NA	intronic	ENSG00000215372	NA	NA	NA	NA	NA	8p23.1	NA	NA	NA	NA	rs3989699	NA	NA	0.342	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.37	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.375447	NA	NA	NA	NA	NA	0.043	NA	3.63
1289	14	22591583	22591583	G	T	intergenic	OR4E2,DAD1	dist=457345;dist=442224	NA	NA	intronic	ENSG00000211807	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs145169458	0.01	0.01	0.007	0.00559105	0.0199	NA	0.0072	NA	0.0031	0.02	NA	0.01	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.430681	NA	NA	0.017285	0.003613	NA	NA	NA	3.6294817
1289	2	26781247	26781247	G	C	intronic	OTOF	NA	NA	NA	intronic	ENSG00000115155	NA	NA	NA	NA	NA	2p23.3	NA	NA	NA	NA	rs4665880	0.31	0.31	0.301	0.297324	0.3708	0.1349	0.5159	0.2254	0.3313	0.36	0.16	0.51	0.27	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.314497	3.314497	NA	NA	NA	NA	0.333	NA	3.6292
1289	2	130952498	130952498	G	A	intronic	TUBA3E	NA	NA	NA	intronic	ENSG00000152086	NA	NA	NA	NA	NA	2q21.1	NA	NA	NA	NA	rs1809107	0.42	0.42	0.374	0.415935	0.3708	0.4425	0.4856	0.3722	0.4448	0.36	0.47	0.47	0.4	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.97574	NA	NA	NA	NA	NA	0.543	NA	3.6292
1289	2	130952540	130952540	C	T	intronic	TUBA3E	NA	NA	NA	intronic	ENSG00000152086	NA	NA	NA	NA	NA	2q21.1	NA	NA	NA	NA	rs56151061	0.41	0.41	0.362	0.415136	0.3708	0.4425	0.4856	0.3691	0.4448	0.36	0.47	0.46	0.4	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.11658	NA	NA	NA	NA	NA	0.529	NA	3.6292
1289	2	223511751	223511751	T	C	intronic	FARSB	NA	NA	NA	intronic	ENSG00000116120	NA	NA	NA	NA	NA	2q36.1	NA	NA	NA	NA	rs11695525	0.28	0.28	0.233	0.240815	0.3708	0.2927	0.2651	0.1014	0.2249	0.38	0.31	0.25	0.1	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.029729	NA	NA	NA	NA	ID=COSN166418;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.268	NA	3.6292
1289	3	192590975	192590975	T	A	intronic	MB21D2	NA	NA	NA	intronic	ENSG00000180611	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs56001245	0.4	0.4	0.388	0.389577	0.3708	0.5615	0.2939	0.3033	0.4162	0.36	0.59	0.32	0.29	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.62945	NA	NA	NA	NA	NA	0.399	NA	3.6292
1289	9	13987261	13987261	C	G	intergenic	LINC00583,NFIB	dist=41655;dist=94581	NA	NA	ncRNA_exonic	ENSG00000229268	NA	NA	NA	NA	NA	9p23	NA	NA	NA	NA	rs870408	NA	NA	NA	0.176518	0.3708	0.0218	0.2421	0.1566	0.1166	NA	NA	NA	NA	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.113766	NA	NA	NA	NA	NA	0.326	NA	3.6292
1289	17	2222325	2222325	C	T	intronic	SRR	NA	NA	NA	intronic	ENSG00000167720	NA	NA	NA	NA	NA	17p13.3	NA	NA	NA	NA	rs8081273	0.52	0.52	0.502	0.496406	0.3708	0.6776	0.5461	0.587	0.2812	0.37	0.69	0.52	0.55	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.068381	NA	NA	NA	NA	NA	0.471	NA	3.6292
1289	17	8397315	8397315	C	T	intronic	MYH10	NA	NA	NA	intronic	ENSG00000133026	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs2277670	0.41	0.41	0.406	0.415335	0.3708	0.4375	0.428	0.3933	0.4591	0.38	0.42	0.37	0.46	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.112202	NA	NA	NA	NA	NA	0.384	NA	3.6292
1289	4	89668210	89668210	G	T	intronic	FAM13A	NA	NA	NA	intronic	ENSG00000138640	NA	NA	NA	NA	NA	4q22.1	NA	NA	NA	NA	rs2278877	0.21	0.21	0.211	0.249002	0.1024	0.2986	0.0562	0.323	0.3855	0.11	0.31	0.07	0.34	0.1618	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.069508	NA	NA	0.106628	0.273264	NA	0.239	NA	3.629172
1289	3	193036739	193036739	G	C	intronic	ATP13A5	NA	NA	NA	intronic	ENSG00000187527	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs73888251	0.2	0.2	0.198	0.218051	0.0994	0.2768	0.147	0.3101	0.2055	0.1	0.29	0.15	0.28	0.156	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.213644	NA	NA	0.115465	0.266909	NA	0.21	NA	3.629135
1289	11	129990587	129990587	A	G	intronic	APLP2	NA	NA	NA	intronic	ENSG00000084234	NA	NA	NA	NA	NA	11q24.3	NA	NA	NA	NA	rs747180	0.28	0.28	0.295	0.305511	0.0964	0.3254	0.1455	0.7042	0.0746	0.1	0.3	0.14	0.63	0.1626	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.494319	NA	NA	0.111939	0.626306	ID=COSN164098;OCCURENCE=1(NS)	0.341	NA	3.629061
1289	19	6477256	6477256	G	T	exonic	DENND1C	NA	synonymous SNV	DENND1C:NM_024898:exon8:c.C486A:p.P162P	exonic	ENSG00000205744	NA	synonymous SNV	ENSG00000205744:ENST00000543576:exon6:c.C354A:p.P118P,ENSG00000205744:ENST00000590173:exon7:c.C354A:p.P118P,ENSG00000205744:ENST00000590867:exon7:c.C354A:p.P118P,ENSG00000205744:ENST00000381480:exon8:c.C486A:p.P162P,ENSG00000205744:ENST00000590473:exon8:c.C354A:p.P118P	NA	NA	19p13.3	NA	NA	NA	NA	rs348398	0.64	0.64	0.622	0.644569	0.6799	0.4722	0.6268	0.7912	0.6002	0.67	0.45	0.63	0.82	0.6459	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.225139	NA	NA	0.711869	0.774014	NA	0.558	NA	3.6289976
1289	22	30866471	30866471	A	G	intronic	SEC14L3	NA	NA	NA	intronic	ENSG00000100012	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs35074129	0.06	0.06	0.07	0.0449281	0.1461	0.001	0.0692	0.0038	0.0245	0.14	0.0017	0.06	0.0041	0.0897	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.099595	NA	NA	0.135233	0.024058	NA	0.159	NA	3.628967
1289	15	101887794	101887794	T	C	UTR3	PCSK6	NM_138324:c.*134A>G,NM_138323:c.*175A>G	NA	NA	UTR3	ENSG00000140479	ENST00000398181:c.*175A>G,ENST00000344273:c.*134A>G	NA	NA	NA	NA	15q26.3	NA	NA	NA	NA	rs1030	0.76	0.76	0.778	0.737021	0.7048	0.7847	0.8084	0.8313	0.5429	0.7	0.8	0.78	0.79	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.581065	NA	NA	NA	NA	NA	0.819	NA	3.6285334
1289	15	30020106	30020106	A	G	intronic	TJP1	NA	NA	NA	intronic	ENSG00000104067	NA	NA	NA	NA	NA	15q13.1	NA	NA	NA	NA	rs11073221	0.11	0.11	0.085	0.141973	0.1262	0.125	0.2017	0.0605	0.2434	0.11	0.1	0.18	0.07	0.1363	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.726149	NA	NA	0.109299	0.071855	NA	0.094	NA	3.628201
1289	4	83626382	83626382	C	A	intronic	SCD5	NA	NA	NA	intronic	ENSG00000145284	NA	NA	NA	NA	NA	4q21.22	NA	NA	NA	NA	rs1876218	0.35	0.35	0.295	0.316494	0.3718	0.4296	0.4841	0.0719	0.3548	0.39	0.42	0.47	0.1	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.68262	1.68262	NA	NA	NA	NA	0.297	NA	3.6282
1289	6	3298568	3298568	C	T	intronic	SLC22A23	NA	NA	NA	intronic	ENSG00000137266,ENSG00000180822	NA	NA	NA	NA	NA	6p25.2	NA	NA	NA	NA	rs72839355	0.23	0.23	0.204	0.220647	0.3718	0.1766	0.2118	0.0492	0.3487	0.38	0.18	0.23	0.06	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.318281	NA	NA	NA	NA	NA	0.174	NA	3.6282
1289	6	160484321	160484321	A	G	intronic	IGF2R	NA	NA	NA	intronic	ENSG00000197081	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs8191852	0.52	0.52	0.49	0.532149	0.3718	0.6925	0.4352	0.6256	0.4744	0.37	0.71	0.42	0.58	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.782194	NA	NA	NA	NA	NA	0.529	NA	3.6282
1289	7	65983529	65983529	G	A	intergenic	LINC00174,LOC493754	dist=118134;dist=35024	NA	NA	ncRNA_intronic	ENSG00000234500	NA	NA	NA	NA	NA	7q11.21	NA	NA	NA	NA	rs11763189	0.38	0.38	0.319	0.407947	0.3718	0.5575	0.3977	0.2436	0.5204	0.37	0.55	0.38	0.21	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.340661	NA	NA	NA	NA	NA	0.377	NA	3.6282
1289	7	150209733	150209733	G	C	intergenic	GIMAP8,GIMAP7	dist=33250;dist=2212	NA	NA	ncRNA_exonic	ENSG00000213205	NA	NA	NA	NA	NA	7q36.1	NA	NA	NA	NA	rs111350935	0.27	0.27	0.227	0.233826	0.3718	0.2411	0.2767	0.0961	0.2403	0.36	0.27	0.27	0.12	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.360391	NA	NA	NA	NA	NA	0.181	NA	3.6282
1289	9	88943171	88943171	T	C	intronic	ZCCHC6	NA	NA	NA	intronic	ENSG00000083223	NA	NA	NA	NA	NA	9q21.33	NA	NA	NA	NA	rs791314	0.17	0.17	0.163	0.136981	0.3718	0.006	0.1888	0.0204	0.1513	0.38	0.01	0.19	0.03	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.449215	NA	NA	NA	NA	NA	0.225	NA	3.6282
1289	11	47447346	47447346	C	T	intronic	PSMC3	NA	NA	NA	intronic	ENSG00000165916	NA	NA	NA	NA	NA	11p11.2	NA	NA	NA	NA	rs10838709	0.3	0.3	0.298	0.327276	0.3718	0.3988	0.2579	0.1422	0.5072	0.37	0.33	0.27	0.17	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.354065	2.354065	NA	NA	NA	NA	0.275	NA	3.6282
1289	13	25399677	25399677	A	G	intronic	RNF17	NA	NA	NA	intronic	ENSG00000132972	NA	NA	NA	NA	NA	13q12.12	NA	NA	NA	NA	rs12429158	0.41	0.41	0.397	0.407348	0.3718	0.3562	0.4452	0.447	0.4162	0.38	0.39	0.44	0.44	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.559429	NA	NA	NA	NA	NA	0.362	NA	3.6282
1289	20	31677474	31677474	A	G	intronic	BPIFB4	NA	NA	NA	intronic	ENSG00000186191	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs7271727	0.43	0.43	0.36	0.422923	0.3718	0.753	0.4496	0.1233	0.5215	0.38	0.76	0.42	0.13	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.192621	NA	NA	NA	NA	NA	NA	NA	3.6282
1289	21	37420785	37420785	C	T	intronic	SETD4	NA	NA	NA	intronic	ENSG00000185917	NA	NA	NA	NA	NA	21q22.12	NA	NA	NA	NA	rs880221	0.36	0.36	0.351	0.378594	0.3718	0.3403	0.4121	0.3623	0.4233	0.37	0.3	0.41	0.37	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.135718	NA	NA	NA	NA	NA	0.362	NA	3.6282
1289	16	12662328	12662328	C	G	intronic	SNX29	NA	NA	NA	ncRNA_intronic	ENSG00000259899	NA	NA	NA	NA	NA	16p13.12	NA	NA	NA	NA	rs2288422	0.31	0.31	0.304	0.307708	0.2306	0.4514	0.1974	0.3419	0.271	0.25	0.44	0.22	0.32	0.2521	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.417771	NA	NA	0.222485	0.292393	NA	0.29	NA	3.6281483
1289	20	52592026	52592026	T	C	intronic	BCAS1	NA	NA	NA	intronic	ENSG00000064787	NA	NA	NA	NA	NA	20q13.2	NA	NA	NA	NA	rs2302039	0.13	0.13	0.119	0.127995	0.1948	0.1419	0.134	0.0098	0.2004	0.19	0.12	0.16	0.02	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.224517	3.224517	NA	0.177247	0.031069	NA	0.094	NA	3.627953
1289	22	22868211	22868211	G	A	UTR3	ZNF280A	NM_080740:c.*115C>T	NA	NA	UTR3	ENSG00000169548	ENST00000302097:c.*115C>T	NA	NA	NA	NA	22q11.22	NA	NA	NA	NA	rs361558	0.53	0.53	0.474	0.474241	0.7058	0.4127	0.732	0.2398	0.4335	0.7	0.42	0.7	0.26	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.073864	NA	NA	NA	NA	NA	0.413	NA	3.6275334
1289	1	203819203	203819203	A	G	intronic	ZC3H11A	NA	NA	NA	intronic	ENSG00000058673	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs11240605	0.09	0.09	0.077	0.0872604	0.1282	0.0357	0.0562	0.112	0.0869	0.13	0.04	0.08	0.08	0.1179	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.926571	NA	NA	0.126452	0.112373	NA	0.058	NA	3.627448
1289	11	48998688	48998688	A	G	intergenic	OR4A47,TRIM49B	dist=487414;dist=54464	NA	NA	ncRNA_exonic	ENSG00000220948	NA	NA	NA	NA	NA	11p11.12	NA	NA	NA	NA	rs7113308	0.18	0.18	0.155	0.196286	0.1769	0.1667	0.1527	0.2995	0.138	0.17	0.16	0.14	0.26	0.1957	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.94177	NA	1	NA	NA	NA	0.13	NA	3.6274
1289	9	134342939	134342939	A	G	intronic	PRRC2B	NA	NA	NA	intronic	ENSG00000130723	NA	NA	NA	NA	NA	9q34.13	NA	NA	NA	NA	rs17458249	0.06	0.06	0.04	0.043131	0.1402	0.001	0.0591	0.0061	0.0256	0.13	0.0017	0.06	0.0041	0.1175	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.44288	NA	NA	0.115088	0.018974	NA	0.029	NA	3.627212
1289	1	75680433	75680433	G	A	intronic	SLC44A5	NA	NA	NA	intronic	ENSG00000137968	NA	NA	NA	NA	NA	1p31.1	NA	NA	NA	NA	rs687715	0.34	0.34	0.342	0.357029	0.3728	0.1548	0.3012	0.5068	0.3865	0.39	0.14	0.32	0.5	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.465285	NA	NA	NA	NA	NA	0.312	NA	3.6272
1289	6	29797782	29797782	T	C	intronic	HLA-G	NA	NA	NA	intronic	ENSG00000204632	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs1611627	0.44	0.44	0.429	0.45647	0.3728	0.4067	0.428	0.5076	0.545	0.36	0.49	0.43	0.49	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.096935	NA	NA	NA	NA	NA	0.478	NA	3.6272
1289	14	77639925	77639925	G	A	intergenic	ZDHHC22,TMEM63C	dist=31791;dist=8177	NA	NA	ncRNA_exonic	ENSG00000258552	NA	NA	NA	NA	NA	14q24.3	NA	NA	NA	NA	rs8016243	0.4	0.4	0.375	0.400958	0.3728	0.6796	0.2911	0.1505	0.5593	0.38	0.67	0.28	0.18	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.154477	NA	NA	NA	NA	NA	0.413	NA	3.6272
1289	14	104750871	104750871	G	A	intergenic	KIF26A,C14orf180	dist=103636;dist=295185	NA	NA	ncRNA_intronic	ENSG00000258913	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs28652801	0.48	0.48	0.47	0.528355	0.3728	0.5387	0.3631	0.7776	0.4581	0.36	0.48	0.36	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.441096	1.441096	NA	NA	NA	NA	0.507	NA	3.6272
1289	10	102059329	102059329	G	C	intronic	PKD2L1	NA	NA	NA	intronic	ENSG00000107593	NA	NA	NA	NA	NA	10q24.31	NA	NA	NA	NA	rs2242050	0.18	0.18	0.178	0.186901	0.1213	0.1171	0.183	0.323	0.1452	0.12	0.12	0.19	0.34	0.1383	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.785976	NA	NA	0.113372	0.278711	NA	0.167	NA	3.627028
1289	6	49816049	49816049	T	A	intronic	CRISP1	NA	NA	NA	intronic	ENSG00000124812	NA	NA	NA	NA	NA	6p12.3	NA	NA	NA	NA	rs62404906	0.06	0.06	0.041	0.0439297	0.1272	NA	0.0504	0.0091	0.046	0.13	NA	0.06	0.01	0.0988	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.34888	NA	NA	0.14736	0.031321	NA	0.101	NA	3.62664
1289	13	45914957	45914957	T	C	intronic	TPT1	NA	NA	NA	splicing	ENSG00000133112	NA	NA	NA	NA	NA	13q14.13	NA	Name=CTCF,TAF1,E2F6_(H-50),ETS1,Pol2,YY1_(C-20),HEY1,ZBTB7A_(SC-34508),c-Myc,CCNT2,GATA2_(CG2-96),TBP,YY1,Ini1,CTCF_(SC-5916),Pol2-4H8,E2F1,HA-E2F1	NA	NA	rs2234216	0.6	0.6	0.604	0.602436	0.6223	0.3353	0.5749	0.9085	0.4632	0.62	0.34	0.59	0.91	0.6165	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.151723	NA	NA	0.634575	0.848409	NA	0.652	NA	3.626625
1289	11	16873799	16873799	C	T	intronic	PLEKHA7	NA	NA	NA	intronic	ENSG00000166689	NA	NA	NA	NA	NA	11p15.1	NA	NA	NA	NA	rs417406	0.12	0.12	0.12	0.11262	0.1362	0.1577	0.183	0.0257	0.1094	0.12	0.17	0.18	0.03	0.12	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.041617	NA	NA	0.117257	0.038864	NA	0.101	NA	3.626543
1289	19	10096482	10096482	C	T	intronic	COL5A3	NA	NA	NA	intronic	ENSG00000080573	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs11670705	0.18	0.18	0.169	0.197085	0.1233	0.0833	0.1326	0.4206	0.1339	0.12	0.08	0.14	0.4	0.137	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.768018	NA	NA	0.113256	0.374943	NA	0.196	NA	3.626444
1289	1	154420778	154420778	T	C	intronic	IL6R	NA	NA	NA	intronic	ENSG00000160712	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs7529229	0.47	0.47	0.462	0.453874	0.3738	0.3204	0.585	0.6604	0.3016	0.37	0.36	0.53	0.69	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.553615	NA	NA	NA	NA	NA	0.522	NA	3.6262
1289	6	165715875	165715875	A	C	intronic	C6orf118	NA	NA	NA	intronic	ENSG00000112539	NA	NA	NA	NA	NA	6q27	NA	NA	NA	NA	rs561155	0.46	0.46	0.461	0.488618	0.3738	0.2073	0.4424	0.8389	0.456	0.39	0.24	0.43	0.86	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.347067	NA	NA	NA	NA	NA	0.471	NA	3.6262
1289	6	165715891	165715891	T	C	intronic	C6orf118	NA	NA	NA	intronic	ENSG00000112539	NA	NA	NA	NA	NA	6q27	NA	NA	NA	NA	rs561112	0.43	0.43	0.437	0.460863	0.3738	0.2113	0.4308	0.7368	0.456	0.38	0.24	0.42	0.75	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.400108	NA	NA	NA	NA	NA	0.449	NA	3.6262
1289	19	8976504	8976504	G	A	intronic	MUC16	NA	NA	NA	intronic	ENSG00000181143	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs3764553	0.32	0.32	0.31	0.282149	0.3738	0.2569	0.3602	0.2292	0.2301	0.37	0.31	0.4	0.2	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.108053	NA	NA	NA	NA	NA	0.275	NA	3.6262
1289	15	85411692	85411692	C	T	UTR3	ALPK3	NM_020778:c.*5C>T	NA	NA	UTR3	ENSG00000136383	ENST00000258888:c.*5C>T	NA	NA	NA	NA	15q25.3	NA	NA	NA	NA	rs3748380	0.36	0.36	0.323	0.394968	0.2078	0.5823	0.2997	0.3896	0.4693	0.2	0.56	0.3	0.41	0.3075	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.202856	NA	NA	0.192066	0.362335	NA	0.297	NA	3.6259674
1289	10	49446204	49446204	T	C	intronic	FRMPD2	NA	NA	NA	intronic	ENSG00000170324	NA	NA	NA	NA	NA	10q11.22	NA	NA	NA	NA	rs905184	0.12	0.12	0.12	0.11881	0.1322	0.0754	0.0749	0.1687	0.1135	0.14	0.06	0.08	0.2	0.1187	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.739969	NA	NA	0.12314	0.168861	NA	0.174	NA	3.62596
1289	6	49815906	49815906	A	G	intronic	CRISP1	NA	NA	NA	intronic	ENSG00000124812	NA	NA	NA	NA	NA	6p12.3	NA	NA	NA	NA	rs62404905	0.06	0.06	0.042	0.0439297	0.1272	NA	0.0504	0.0091	0.046	0.13	NA	0.06	0.01	0.0983	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.304251	NA	NA	0.148605	0.032456	NA	0.101	NA	3.625895
1289	14	106471547	106471547	A	G	intergenic	ADAM6,LINC00226	dist=33189;dist=272722	NA	NA	exonic	ENSG00000211935	NA	nonsynonymous SNV	ENSG00000211935:ENST00000390595:exon2:c.T50C:p.V17A	NA	NA	14q32.33	NA	NA	NA	NA	rs1143496	0.47	0.47	0.413	0.584465	0.5915	0.7351	0.5634	0.3654	0.7331	0.48	0.65	0.44	0.26	0.616	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.250828	NA	1	NA	NA	NA	0.442	NA	3.6258334
1289	12	11421522	11421522	C	T	intronic	PRB3	NA	NA	NA	intronic	ENSG00000197870	NA	NA	NA	NA	NA	12p13.2	NA	NA	NA	NA	rs59152757	0.09	0.09	0.094	0.102037	0.1113	0.0645	0.1023	0.0787	0.1626	0.11	0.07	0.11	0.08	0.1287	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.613195	NA	NA	0.134186	0.084884	NA	0.123	NA	3.625814
1289	17	39728050	39728050	G	A	exonic	KRT9	NA	synonymous SNV	KRT9:NM_000226:exon1:c.C195T:p.G65G	exonic	ENSG00000171403	NA	synonymous SNV	ENSG00000171403:ENST00000246662:exon1:c.C195T:p.G65G	NA	NA	17q21.2	NA	NA	NA	NA	rs8070680	0.75	0.75	0.743	0.78095	0.667	1	0.7709	0.6377	0.8732	0.67	1	0.75	0.6	0.7292	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.273738	NA	NA	0.644767	0.631185	NA	0.754	NA	3.6256996
1289	2	127821452	127821452	C	T	intronic	BIN1	NA	NA	NA	intronic	ENSG00000136717	NA	NA	NA	NA	NA	2q14.3	NA	NA	NA	NA	rs2071267	0.17	0.17	0.136	0.145567	0.1849	0.2202	0.1859	0.0499	0.1288	0.19	0.23	0.19	0.06	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.729273	NA	NA	0.189503	0.051301	NA	0.123	NA	3.625597
1289	19	53381429	53381429	G	T	UTR3	ZNF320	NM_207333:c.*2420C>A	NA	NA	UTR3	ENSG00000182986	ENST00000391781:c.*2420C>A,ENST00000595635:c.*2420C>A	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs2162919	0.57	0.57	0.575	0.585264	0.7078	0.3631	0.4712	0.6914	0.6258	0.69	0.34	0.51	0.66	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.197684	NA	NA	NA	NA	NA	0.696	NA	3.6255334
1289	6	49808716	49808716	G	A	intronic	CRISP1	NA	NA	NA	intronic	ENSG00000124812	NA	NA	NA	NA	NA	6p12.3	NA	NA	NA	NA	rs1572882	0.06	0.06	0.042	0.0445288	0.1272	NA	0.0504	0.0106	0.047	0.13	NA	0.06	0.01	0.0988	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.466909	NA	NA	0.148488	0.032683	NA	0.101	NA	3.625512
1289	11	65320780	65320780	G	A	intronic	LTBP3	NA	NA	NA	intronic	ENSG00000168056	NA	NA	NA	NA	NA	11q13.1	NA	NA	Name=26	NA	rs4244811	0.58	0.58	0.543	0.547923	0.6948	0.6905	0.7233	0.2239	0.5634	0.7	0.66	0.69	0.24	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.144933	NA	NA	0.679761	0.304191	NA	0.464	NA	3.625439
1289	6	96999643	96999643	A	G	intronic	UFL1	NA	NA	NA	intronic	ENSG00000014123	NA	NA	NA	NA	NA	6q16.1	NA	NA	NA	NA	rs2255552	0.46	0.46	0.507	0.482628	0.3748	0.3532	0.3271	0.8222	0.3783	0.36	0.35	0.38	0.8	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.419197	NA	NA	NA	NA	NA	0.522	NA	3.6252
1289	9	130117861	130117861	C	A	intronic	GARNL3	NA	NA	NA	intronic	ENSG00000136895	NA	NA	NA	NA	NA	9q33.3	NA	NA	NA	NA	rs58473776	0.24	0.24	0.227	0.232628	0.3748	0.2173	0.2118	0.09	0.3098	0.37	0.19	0.23	0.11	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.653222	NA	NA	NA	NA	NA	0.297	NA	3.6252
1289	10	90074140	90074140	G	A	intronic	RNLS	NA	NA	NA	intronic	ENSG00000184719	NA	NA	NA	NA	NA	10q23.31	NA	NA	NA	NA	rs11202710	0.27	0.27	0.259	0.279752	0.3748	0.1726	0.3343	0.1573	0.4192	0.38	0.2	0.3	0.17	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.326557	NA	NA	NA	NA	NA	0.384	NA	3.6252
1289	14	77809939	77809939	C	T	intronic	TMED8	NA	NA	NA	intronic	ENSG00000100580	NA	NA	NA	NA	NA	14q24.3	NA	NA	NA	NA	rs3815628	0.35	0.35	0.303	0.33726	0.3748	0.5258	0.4539	0.0696	0.3834	0.37	0.52	0.42	0.09	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.066904	3.066904	NA	NA	NA	NA	0.21	NA	3.6252
1289	19	8976921	8976921	C	T	intronic	MUC16	NA	NA	NA	intronic	ENSG00000181143	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs11085755	0.32	0.32	0.295	0.285543	0.3748	0.2609	0.3573	0.23	0.2434	0.37	0.31	0.39	0.2	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.584084	NA	NA	NA	NA	NA	0.275	NA	3.6252
1289	19	42313921	42313921	G	T	intronic	CEACAM3	NA	NA	NA	intronic	ENSG00000170956	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs734107	0.51	0.51	0.495	0.520767	0.3748	0.5367	0.4841	0.7534	0.3661	0.38	0.56	0.42	0.72	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.118545	NA	NA	NA	NA	NA	0.536	NA	3.6252
1289	20	1896244	1896244	A	G	intronic	SIRPA	NA	NA	NA	intronic	ENSG00000198053	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs6136376	0.44	0.44	0.423	0.446286	0.3748	0.6528	0.4582	0.3207	0.4683	0.37	0.66	0.42	0.33	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.560798	NA	NA	NA	NA	NA	0.42	NA	3.6252
1289	22	32886998	32886998	T	C	intronic	FBXO7	NA	NA	NA	intronic	ENSG00000100225	NA	NA	NA	NA	NA	22q12.3	NA	NA	NA	NA	rs738982	0.49	0.49	0.481	0.494209	0.3748	0.6925	0.5663	0.4289	0.4499	0.39	0.69	0.53	0.39	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.406271	NA	NA	NA	NA	ID=COSN166740;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.442	NA	3.6252
1289	12	48179044	48179044	C	G	intronic	HDAC7	NA	NA	NA	exonic	ENSG00000268069	NA	nonsynonymous SNV	ENSG00000268069:ENST00000599515:exon1:c.C128G:p.S43C	NA	NA	12q13.11	NA	NA	NA	NA	rs3815133	0.82	0.82	0.82	0.81869	0.7445	0.9137	0.7867	0.823	0.8139	0.75	0.92	0.78	0.83	0.7971	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.407969	3.407969	NA	NA	NA	NA	0.841	NA	3.6250667
1290	9	35074917	35074917	T	C	intronic	FANCG	NA	NA	NA	intronic	ENSG00000221829	NA	NA	NA	NA	NA	9p13.3	Score=906;Name=V$AREB6_01	NA	NA	NA	rs587118	0.25	0.25	0.22	0.220248	0.4801	0.004	0.5	0.0212	0.2464	0.48	0.0035	0.47	0.03	0.3957	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.468385	1.468385	NA	0.499302	0.094417	NA	0.355	NA	3.624898
1290	7	154143443	154143443	C	T	intronic	DPP6	NA	NA	NA	intronic	ENSG00000130226	NA	NA	NA	NA	NA	7q36.2	NA	NA	NA	NA	rs2291538	0.22	0.22	0.244	0.211462	0.1193	0.2063	0.1268	0.4289	0.0777	0.12	0.23	0.12	0.42	0.1385	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.125173	NA	NA	0.117333	0.377299	NA	0.174	NA	3.624867
1290	1	19564650	19564650	C	G	intronic	EMC1	NA	NA	NA	ncRNA_intronic	ENSG00000230424	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs2073104	0.32	0.32	0.28	0.307308	0.2237	0.6141	0.3847	0.1029	0.2986	0.21	0.64	0.34	0.1	0.269	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.126575	NA	NA	0.216163	0.120064	NA	0.181	NA	3.6244703
1290	17	10418275	10418275	T	G	intronic	MYH1	NA	NA	NA	ncRNA_intronic	ENSG00000214970	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs1017068	0.49	0.49	0.468	0.51238	0.335	0.8631	0.4841	0.3132	0.6227	0.34	0.87	0.48	0.31	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.014107	NA	NA	0.373899	0.34104	NA	0.529	NA	3.6244343
1290	4	76571732	76571732	C	T	intronic	G3BP2	NA	NA	NA	intronic	ENSG00000138757	NA	NA	NA	NA	NA	4q21.1	NA	NA	NA	NA	rs884871	0.32	0.32	0.322	0.290935	0.3757	0.0685	0.2781	0.5265	0.1237	0.37	0.06	0.3	0.53	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.258386	NA	NA	NA	NA	NA	0.406	NA	3.6243
1290	9	126129351	126129351	G	A	intronic	CRB2	NA	NA	NA	intronic	ENSG00000148204	NA	NA	NA	NA	NA	9q33.3	NA	NA	NA	NA	rs10760281	0.31	0.31	0.289	0.291733	0.3757	0.3879	0.3271	0.1097	0.3272	0.39	0.34	0.36	0.11	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.59823	NA	NA	NA	NA	NA	0.196	NA	3.6243
1290	14	95089867	95089867	A	T	intronic	SERPINA3	NA	NA	NA	intronic	ENSG00000196136	NA	NA	NA	NA	NA	14q32.13	NA	NA	NA	NA	rs742897	0.45	0.45	0.496	0.48143	0.3757	0.3433	0.4006	0.7859	0.3783	0.37	0.3	0.4	0.77	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.568912	NA	NA	NA	NA	NA	0.362	NA	3.6243
1290	17	31324657	31324657	T	C	intronic	SPACA3	NA	NA	NA	intronic	ENSG00000141316	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs28958	0.46	0.46	0.48	0.508387	0.3757	0.4226	0.2911	0.7413	0.5726	0.39	0.45	0.31	0.69	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.798834	NA	NA	NA	NA	NA	0.471	NA	3.6243
1290	18	33726447	33726447	C	G	intronic	ELP2	NA	NA	NA	intronic	ENSG00000134759	NA	NA	NA	NA	NA	18q12.2	NA	NA	NA	NA	rs1785927	0.29	0.29	0.27	0.245208	0.3757	0.1756	0.3674	0.1641	0.2055	0.39	0.18	0.41	0.17	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.76776	NA	NA	NA	NA	NA	0.254	NA	3.6243
1290	12	62114671	62114671	T	C	intronic	FAM19A2	NA	NA	NA	UTR3	ENSG00000198673	ENST00000549379:c.*23A>G	NA	NA	Score=623;Name=lod=455	NA	12q14.1	NA	NA	NA	NA	rs7485027	0.54	0.54	0.554	0.551917	0.5179	0.5992	0.5173	0.5923	0.5082	0.53	0.56	0.5	0.59	0.5271	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.957469	1.957469	NA	0.497489	0.568493	NA	0.551	NA	3.6241777
1290	18	6977719	6977719	A	G	intronic	LAMA1	NA	NA	NA	intronic	ENSG00000101680	NA	NA	NA	NA	NA	18p11.31	NA	NA	NA	NA	rs10164200	0.12	0.12	0.113	0.106629	0.1252	0.0883	0.1009	0.1051	0.1125	0.13	0.1	0.1	0.13	0.1179	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.904792	1.904792	NA	0.132791	0.108488	NA	0.138	NA	3.624109
1290	11	123754078	123754078	A	G	intronic	TMEM225	NA	NA	NA	intronic	ENSG00000204300	NA	NA	NA	NA	NA	11q24.1	NA	NA	NA	NA	rs61908536	0.1	0.1	0.095	0.0882588	0.1372	0.0228	0.0821	0.1067	0.0849	0.14	0.02	0.07	0.14	0.1171	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.895899	NA	NA	0.121685	0.109219	NA	0.072	NA	3.624015
1290	22	30767729	30767729	A	G	ncRNA_exonic	KIAA1656	NA	NA	NA	intronic	ENSG00000187860	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs1076298	0.17	0.17	0.171	0.153554	0.2545	0.1458	0.1571	0.1331	0.0828	0.24	0.12	0.16	0.14	0.1976	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.844159	NA	NA	0.257326	0.151158	NA	0.275	NA	3.6239073
1290	22	37628993	37628993	T	G	intronic	RAC2	NA	NA	NA	intronic	ENSG00000128340	NA	NA	NA	NA	NA	22q13.1	NA	NA	NA	NA	rs9610684	0.17	0.17	0.162	0.174521	0.1223	0.2718	0.0836	0.1989	0.1595	0.12	0.22	0.09	0.22	0.1352	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.063516	NA	NA	0.118605	0.17113	NA	0.217	NA	3.623895
1290	2	197645397	197645397	C	T	intronic	GTF3C3	NA	NA	NA	intronic	ENSG00000119041	NA	NA	NA	NA	NA	2q33.1	NA	NA	NA	NA	rs76804254	0.08	0.08	0.076	0.0698882	0.1332	0.003	0.0836	0.09	0.0368	0.14	NA	0.09	0.08	0.11	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.725464	NA	NA	0.13314	0.094417	NA	0.058	NA	3.62366
1290	5	94259621	94259621	C	T	intronic	MCTP1	NA	NA	NA	intronic	ENSG00000175471	NA	NA	NA	NA	NA	5q15	NA	NA	NA	NA	rs34187028	0.11	0.11	0.098	0.10024	0.1183	0.0595	0.1499	0.0953	0.0951	0.13	0.05	0.16	0.1	0.1217	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.420607	NA	NA	0.136469	0.093282	NA	0.087	NA	3.623531
1290	2	220172576	220172576	A	C	intronic	PTPRN	NA	NA	NA	intronic	ENSG00000054356	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs7591986	0.19	0.19	0.181	0.213658	0.1103	0.125	0.1182	0.4191	0.2014	0.11	0.14	0.14	0.42	0.146	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.796423	3.796423	NA	0.120233	0.380163	NA	0.275	NA	3.623467
1290	12	12247594	12247594	A	G	UTR3	BCL2L14	NM_030766:c.*69A>G	NA	NA	UTR3	ENSG00000121380	ENST00000266434:c.*69A>G	NA	NA	NA	NA	12p13.2	NA	NA	NA	NA	rs11054682	0.19	0.19	0.184	0.166134	0.2535	0.0188	0.1686	0.2428	0.1227	0.26	0.01	0.2	0.26	0.2099	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.010097	NA	NA	0.246628	0.228325	NA	0.232	NA	3.6233054
1290	2	10927345	10927345	T	C	intronic	PDIA6	NA	NA	NA	intronic	ENSG00000143870	NA	NA	NA	NA	NA	2p25.1	NA	NA	NA	NA	rs1686510	0.42	0.42	0.415	0.466653	0.3767	0.4117	0.4179	0.525	0.5716	0.37	0.36	0.43	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.497363	NA	NA	NA	NA	NA	0.457	NA	3.6233
1290	4	48894981	48894981	G	A	intronic	OCIAD2	NA	NA	NA	intronic	ENSG00000145247	NA	NA	NA	NA	NA	4p11	NA	NA	NA	NA	rs2289065	0.4	0.4	0.37	0.356629	0.3767	0.4653	0.5605	0.1558	0.3507	0.37	0.51	0.57	0.18	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.21039	NA	NA	NA	NA	NA	0.283	NA	3.6233
1290	6	38782034	38782034	T	C	intronic	DNAH8	NA	NA	NA	intronic	ENSG00000124721	NA	NA	NA	NA	NA	6p21.2	NA	NA	NA	NA	rs1678691	0.51	0.51	0.473	0.512181	0.3767	0.7946	0.5937	0.3495	0.5225	0.38	0.78	0.55	0.35	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.027047	NA	NA	NA	NA	NA	0.551	NA	3.6233
1290	9	96407848	96407848	A	G	intronic	PHF2	NA	NA	NA	intronic	ENSG00000197724	NA	NA	NA	NA	NA	9q22.31	NA	NA	NA	NA	rs7851271	0.36	0.36	0.329	0.302316	0.3767	0.374	0.3372	0.2943	0.138	0.38	0.39	0.36	0.29	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.701485	NA	NA	NA	NA	NA	0.399	NA	3.6233
1290	10	124036190	124036190	T	C	intronic	BTBD16	NA	NA	NA	intronic	ENSG00000138152	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs7086389	0.5	0.5	0.519	0.484026	0.3767	0.624	0.4798	0.5726	0.3333	0.38	0.64	0.47	0.53	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.284695	NA	NA	NA	NA	NA	0.406	NA	3.6233
1290	10	125528297	125528297	T	G	intronic	CPXM2	NA	NA	NA	intronic	ENSG00000121898	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs1219724	0.4	0.4	0.373	0.382188	0.3767	0.6012	0.4827	0.1558	0.3967	0.38	0.61	0.45	0.16	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.404371	NA	NA	NA	NA	NA	0.312	NA	3.6233
1290	15	41818917	41818917	G	A	intronic	RPAP1	NA	NA	NA	intronic	ENSG00000103932	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs1473781	0.25	0.25	0.217	0.233626	0.3767	0.1756	0.4049	0.0144	0.3211	0.39	0.16	0.39	0.01	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.749187	NA	NA	NA	NA	NA	0.217	NA	3.6233
1290	14	94956134	94956134	G	A	intronic	SERPINA12	NA	NA	NA	intronic	ENSG00000165953	NA	NA	NA	NA	NA	14q32.13	NA	NA	NA	NA	rs3736803	0.13	0.13	0.136	0.100639	0.1451	0.1865	0.1138	0.0068	0.0838	0.14	0.22	0.1	0.01	0.1137	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.352092	NA	NA	0.117907	0.025874	NA	0.058	NA	3.623293
1290	8	42044897	42044897	C	T	intronic	PLAT	NA	NA	NA	intronic	ENSG00000104368	NA	NA	NA	NA	NA	8p11.21	NA	NA	NA	NA	rs8178749	0.12	0.12	0.106	0.116613	0.1153	0.1885	0.085	0.0613	0.1411	0.12	0.16	0.09	0.1	0.1338	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.340535	NA	NA	0.128023	0.074217	NA	0.065	NA	3.622877
1290	14	22090594	22090594	C	G	intergenic	OR10G3,OR10G2	dist=51719;dist=11472	NA	NA	exonic	ENSG00000255569	NA	nonsynonymous SNV	ENSG00000255569:ENST00000542354:exon2:c.C200G:p.A67G	NA	NA	14q11.2	NA	NA	NA	NA	rs1063365	0.29	0.29	0.291	0.290335	0.4394	0.0933	0.2637	0.3154	0.3252	0.43	0.09	0.29	0.32	0.3568	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.698588	NA	0.33	0.414331	0.317662	NA	0.355	NA	3.6228024
1290	11	866499	866499	G	A	intronic	TSPAN4	NA	NA	NA	intronic	ENSG00000214063	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs34165342	0.16	0.16	0.147	0.182708	0.2346	0.1538	0.2277	0.0129	0.3569	0.23	0.17	0.2	0.03	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.107102	NA	NA	0.142678	0.013728	NA	NA	NA	3.622722
1290	21	46186603	46186603	A	G	intergenic	TSPEAR,UBE2G2	dist=55108;dist=1892	NA	NA	intergenic	ENSG00000175894,ENSG00000184787	dist=55108;dist=2352	NA	NA	NA	NA	21q22.3	NA	NA	Name=5	NA	rs3788134	0.79	0.79	0.782	0.781749	0.7107	0.7698	0.7233	0.9213	0.7198	0.72	0.8	0.72	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.70752	NA	NA	NA	NA	NA	0.732	NA	3.6226334
1290	14	107114193	107114193	A	G	intergenic	LINC00221,NONE	dist=162664;dist=NONE	NA	NA	exonic	ENSG00000223648	NA	nonsynonymous SNV	ENSG00000223648:ENST00000454421:exon1:c.T5C:p.M2T	NA	NA	14q32.33	NA	NA	NA	NA	rs2073670	0.51	0.51	0.509	0.584265	0.3887	0.5337	0.4568	0.7564	0.6953	0.38	0.49	0.48	0.76	0.4402	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.049334	NA	0	0.382009	0.675401	NA	0.464	NA	3.6224244
1290	6	168315744	168315744	G	A	intronic	MLLT4	NA	NA	NA	intronic	ENSG00000130396	NA	NA	NA	NA	NA	6q27	NA	NA	NA	NA	rs3213589	0.51	0.51	0.481	0.541334	0.3777	0.7946	0.549	0.3911	0.6462	0.39	0.78	0.54	0.35	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.603629	NA	NA	NA	NA	NA	0.377	NA	3.6223
1290	9	19062942	19062942	A	G	intronic	HAUS6	NA	NA	NA	intronic	ENSG00000147874	NA	NA	NA	NA	NA	9p22.1	NA	NA	NA	NA	rs12343169	0.4	0.4	0.415	0.428514	0.3777	0.2381	0.3746	0.6921	0.3589	0.39	0.22	0.36	0.66	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.555357	NA	NA	NA	NA	NA	0.457	NA	3.6223
1290	22	47071531	47071531	T	C	intronic	GRAMD4	NA	NA	NA	intronic	ENSG00000075240	NA	NA	NA	NA	NA	22q13.31	NA	NA	NA	NA	rs2073276	0.37	0.37	0.32	0.344449	0.3777	0.3988	0.4006	0.3389	0.2219	0.36	0.4	0.44	0.32	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.521265	NA	NA	NA	NA	NA	0.29	NA	3.6223
1290	9	95004421	95004421	G	C	intronic	IARS	NA	NA	NA	intronic	ENSG00000196305	NA	NA	NA	NA	NA	9q22.31	NA	NA	NA	NA	rs41280213	0.1	0.1	0.1	0.123003	0.1223	0.0764	0.1614	0.0522	0.2403	0.13	0.09	0.14	0.05	0.1356	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.279875	NA	NA	0.119884	0.067181	NA	0.101	NA	3.622216
1290	6	32303672	32303672	T	A	intronic	C6orf10	NA	NA	NA	intronic	ENSG00000204296	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs6909607	0.13	0.13	0.109	0.133187	0.1163	0.2083	0.1801	0.0696	0.1258	0.11	0.2	0.17	0.05	0.1454	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.098015	NA	NA	0.116464	0.077763	NA	0.123	NA	3.621836
1290	15	79307632	79307632	A	T	intronic	RASGRF1	NA	NA	NA	intronic	ENSG00000058335	NA	NA	NA	NA	NA	15q25.1	NA	NA	NA	NA	rs3816283	0.09	0.09	0.086	0.081869	0.1362	0.1012	0.0677	0.0386	0.0746	0.13	0.11	0.08	0.04	0.1084	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.873111	NA	NA	0.133706	0.049863	NA	0.043	NA	3.621694
1290	17	18584009	18584009	T	G	intronic	ZNF286B	NA	NA	NA	intronic	ENSG00000249459	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs112134397	0.14	0.14	0.101	0.169329	0.1153	0.0129	0.1585	0.3169	0.1943	0.11	0.02	0.16	0.29	0.1433	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.34909	NA	NA	0.119736	0.296965	NA	0.022	NA	3.621664
1290	8	30854033	30854033	A	G	UTR3	PURG	NM_001015508:c.*76T>C	NA	NA	UTR3	ENSG00000172733	ENST00000339382:c.*76T>C	NA	NA	NA	NA	8p12	NA	NA	NA	NA	rs2725371	0.83	0.83	0.826	0.800919	0.7117	0.9514	0.7867	0.9032	0.6094	0.73	0.95	0.77	0.89	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.453551	NA	NA	NA	NA	NA	0.862	NA	3.6216334
1290	16	3634746	3634746	C	A	intronic	SLX4	NA	NA	NA	intronic	ENSG00000188827	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs12933120	0.07	0.07	0.066	0.0621006	0.1382	0.0099	0.0764	0.0045	0.1053	0.15	NA	0.09	0.0041	0.1015	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.744012	NA	NA	0.138721	0.021165	NA	0.058	NA	3.621579
1290	2	219609995	219609995	G	C	intronic	TTLL4	NA	NA	NA	intronic	ENSG00000135912	NA	NA	NA	NA	NA	2q35	NA	Name=Max,c-Myc,Pol2,eGFP-JunD	NA	NA	rs2272190	0.42	0.42	0.409	0.410743	0.4662	0.1409	0.4222	0.6286	0.3292	0.46	0.16	0.42	0.66	0.4412	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.651147	NA	NA	0.471279	0.607354	NA	0.536	NA	3.621321
1290	1	86954591	86954591	T	C	intronic	CLCA1	NA	NA	NA	intronic	ENSG00000016490	NA	NA	NA	NA	NA	1p22.3	NA	NA	NA	NA	rs2075632	0.24	0.24	0.229	0.231829	0.3787	0.0942	0.353	0.1362	0.2658	0.38	0.09	0.34	0.14	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.375038	NA	NA	NA	NA	NA	0.268	NA	3.6213
1290	1	89427252	89427252	G	A	intronic	CCBL2	NA	NA	NA	intronic	ENSG00000137944	NA	NA	NA	NA	NA	1p22.2	NA	NA	NA	NA	rs10922530	0.32	0.32	0.303	0.275759	0.3787	0.3403	0.4337	0.1157	0.2076	0.35	0.37	0.38	0.15	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.139447	NA	NA	NA	NA	NA	0.304	NA	3.6213
1290	1	207857158	207857158	T	C	intronic	CR1L	NA	NA	NA	intronic	ENSG00000197721	NA	NA	NA	NA	NA	1q32.2	NA	NA	NA	NA	rs12411037	0.32	0.32	0.283	0.297923	0.3787	0.3383	0.2925	0.1906	0.3221	0.38	0.3	0.33	0.22	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.383123	NA	NA	NA	NA	NA	0.217	NA	3.6213
1290	5	170159997	170159997	C	T	intronic	KCNIP1	NA	NA	NA	intronic	ENSG00000182132	NA	NA	NA	NA	NA	5q35.1	NA	NA	NA	NA	rs17650650	0.21	0.21	0.181	0.173922	0.3787	0.0486	0.2882	0.0461	0.184	0.38	0.04	0.35	0.05	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.129235	NA	NA	NA	NA	NA	0.225	NA	3.6213
1290	7	128414484	128414484	T	C	intronic	OPN1SW	NA	NA	NA	intronic	ENSG00000128617	NA	NA	NA	NA	NA	7q32.1	NA	NA	NA	NA	rs17397588	0.21	0.21	0.207	0.178914	0.3787	0.0575	0.2277	0.112	0.1544	0.37	0.05	0.27	0.13	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.252008	NA	NA	NA	NA	NA	0.232	NA	3.6213
1290	9	139286844	139286844	G	C	intronic	SNAPC4	NA	NA	NA	intronic	ENSG00000165684	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs10747031	0.24	0.24	0.238	0.225639	0.3787	0.0476	0.3905	0.146	0.2423	0.37	0.07	0.35	0.15	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.731617	NA	NA	NA	NA	NA	0.246	NA	3.6213
1290	17	38179290	38179290	G	A	intronic	MED24	NA	NA	NA	intronic	ENSG00000008838	NA	NA	NA	NA	NA	17q21.1	NA	NA	NA	NA	rs4794824	0.37	0.37	0.335	0.359824	0.3787	0.4325	0.3343	0.3661	0.2751	0.38	0.42	0.34	0.32	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.969068	NA	NA	NA	NA	NA	0.297	NA	3.6213
1290	17	65026515	65026515	A	G	intronic	CACNG4	NA	NA	NA	intronic	ENSG00000075461	NA	NA	NA	NA	NA	17q24.2	NA	NA	NA	NA	rs2240648	0.46	0.46	0.453	0.472644	0.3787	0.6835	0.4625	0.388	0.4734	0.37	0.71	0.43	0.33	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.099934	NA	NA	NA	NA	NA	0.442	NA	3.6213
1290	19	9014456	9014456	G	A	intronic	MUC16	NA	NA	NA	intronic	ENSG00000181143	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs12460359	0.32	0.32	0.268	0.313299	0.3787	0.3075	0.3516	0.2126	0.3609	0.37	0.28	0.36	0.23	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.508273	NA	NA	NA	NA	NA	0.268	NA	3.6213
1290	5	74134742	74134742	T	C	intronic	FAM169A	NA	NA	NA	intronic	ENSG00000198780	NA	NA	NA	NA	NA	5q13.3	NA	NA	NA	NA	rs16872323	0.13	0.13	0.131	0.131589	0.1352	0.0208	0.1124	0.261	0.0808	0.11	0.02	0.13	0.27	0.1201	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.00746	3.00746	NA	0.123655	0.241333	NA	0.174	NA	3.621045
1290	6	29575003	29575003	G	A	intronic	GABBR1	NA	NA	NA	intronic	ENSG00000204681	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs29267	0.14	0.14	0.107	0.183906	0.1054	0.25	0.1628	0.1051	0.318	0.11	0.23	0.11	0.11	0.1468	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.563865	NA	NA	0.127093	0.109169	NA	0.159	NA	3.620707
1290	17	31107845	31107845	A	G	intronic	MYO1D	NA	NA	NA	intronic	ENSG00000176658	NA	NA	NA	NA	NA	17q11.2	NA	NA	Name=8	NA	rs10512439	0.5	0.5	0.51	0.491414	0.4503	0.7242	0.4467	0.3646	0.4969	0.46	0.72	0.42	0.38	0.4875	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.757753	NA	NA	0.441744	0.361717	NA	0.486	NA	3.620456
1290	8	38027483	38027483	G	C	intronic	LSM1	NA	NA	NA	intronic	ENSG00000175324	NA	NA	NA	NA	NA	8p11.23	NA	NA	NA	NA	rs3015656	0.11	0.11	0.094	0.107228	0.1342	0.1448	0.1196	0.0083	0.1656	0.13	0.15	0.12	0.0041	0.1192	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.188058	NA	NA	0.126163	0.025647	NA	0.058	NA	3.620437
1290	2	207025444	207025444	T	C	intronic	EEF1B2	NA	NA	NA	intronic	ENSG00000114942	NA	NA	NA	NA	NA	2q33.3	NA	Name=Pol2	NA	NA	rs11689362	0.47	0.47	0.448	0.460264	0.4781	0.2569	0.5648	0.6483	0.3231	0.48	0.25	0.57	0.62	0.4556	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.745209	NA	NA	0.44593	0.638221	NA	0.464	NA	3.62037
1290	2	11742458	11742458	A	G	intronic	GREB1	NA	NA	NA	intronic	ENSG00000196208	NA	NA	NA	NA	NA	2p25.1	NA	NA	NA	NA	rs72772088	0.33	0.33	0.29	0.3127	0.3797	0.4246	0.4395	0.0371	0.411	0.36	0.46	0.45	0.06	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.031367	NA	NA	NA	NA	NA	0.377	NA	3.6203
1290	4	36122737	36122737	A	T	intronic	ARAP2	NA	NA	NA	intronic	ENSG00000047365	NA	NA	NA	NA	NA	4p14	NA	NA	NA	NA	rs4832795	0.33	0.33	0.302	0.322883	0.3797	0.4534	0.3545	0.0832	0.4315	0.4	0.46	0.35	0.07	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.062399	NA	NA	NA	NA	NA	0.283	NA	3.6203
1290	5	13776487	13776487	C	T	intronic	DNAH5	NA	NA	NA	intronic	ENSG00000039139	NA	NA	NA	NA	NA	5p15.2	NA	NA	NA	NA	rs34413787	0.31	0.31	0.303	0.279353	0.3797	0.3353	0.3314	0.1694	0.2301	0.38	0.33	0.3	0.2	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.010317	2.010317	NA	NA	NA	NA	0.29	NA	3.6203
1290	14	20869819	20869819	A	T	intronic	TEP1	NA	NA	NA	intronic	ENSG00000129566	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs2297612	0.25	0.25	0.234	0.217252	0.3797	0.1349	0.304	0.0938	0.2403	0.38	0.14	0.33	0.11	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.040204	NA	NA	NA	NA	NA	0.333	NA	3.6203
1290	18	33722425	33722425	A	G	intronic	ELP2	NA	NA	NA	intronic	ENSG00000134759	NA	NA	NA	NA	NA	18q12.2	NA	NA	NA	NA	rs1789549	0.35	0.35	0.329	0.320687	0.3797	0.2014	0.3847	0.382	0.2546	0.4	0.19	0.43	0.39	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.054155	NA	NA	NA	NA	NA	0.326	NA	3.6203
1290	1	151801951	151801951	G	A	intronic	RORC	NA	NA	NA	intronic	ENSG00000143365	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs4845606	0.15	0.15	0.118	0.147963	0.1183	0.1488	0.232	0.1354	0.135	0.13	0.15	0.22	0.14	0.1443	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.55373	1.55373	NA	0.117326	0.133	NA	0.225	NA	3.620074
1290	13	111176616	111176616	G	T	intronic	RAB20	NA	NA	NA	intronic	ENSG00000139832	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs1062004	0.35	0.35	0.313	0.33766	0.3807	0.2837	0.4265	0.3169	0.3139	0.37	0.29	0.42	0.32	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.244514	NA	NA	NA	NA	NA	0.42	NA	3.6193
1290	14	92627668	92627668	T	A	intronic	CPSF2	NA	NA	NA	intronic	ENSG00000165934	NA	NA	NA	NA	NA	14q32.12	NA	NA	NA	NA	rs2025071	0.64	0.64	0.651	0.656749	0.3807	0.9812	0.5144	0.7201	0.6217	0.38	0.98	0.49	0.76	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.286365	2.286365	NA	NA	NA	NA	0.609	NA	3.6193
1290	20	57572614	57572614	T	C	intronic	CTSZ	NA	NA	NA	intronic	ENSG00000101160	NA	NA	NA	NA	NA	20q13.32	NA	Name=Pol2	NA	NA	rs417847	0.46	0.46	0.425	0.447484	0.4642	0.623	0.438	0.2761	0.4877	0.46	0.62	0.45	0.27	0.4505	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.534801	NA	NA	0.466279	0.324784	NA	0.406	NA	3.619021
1290	12	52755341	52755341	T	C	intronic	KRT85	NA	NA	NA	intronic	ENSG00000135443	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs2298796	0.25	0.25	0.229	0.21266	0.1849	0.5198	0.2118	0.0272	0.1759	0.2	0.53	0.23	0.03	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.978086	NA	NA	0.196103	0.043353	NA	0.094	NA	3.618997
1290	1	160109788	160109788	C	T	intronic	ATP1A2	NA	NA	NA	intronic	ENSG00000018625	NA	NA	NA	NA	NA	1q23.2	NA	NA	NA	NA	rs41288127	0.1	0.1	0.089	0.095647	0.1173	0.0645	0.1282	0.0991	0.0777	0.12	0.05	0.12	0.09	0.1295	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.220679	NA	NA	0.134302	0.111212	NA	0.181	NA	3.618898
1290	18	12329536	12329536	C	G	UTR3	AFG3L2	NM_006796:c.*28G>C	NA	NA	UTR3	ENSG00000141385,ENSG00000176014	ENST00000269143:c.*28G>C;ENST00000591909:c.*354C>G	NA	NA	NA	NA	18p11.21	NA	NA	NA	NA	rs1129115	0.32	0.32	0.31	0.335863	0.2336	0.375	0.4092	0.4342	0.2157	0.23	0.35	0.38	0.39	0.2631	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.093588	NA	NA	0.218023	0.392646	NA	0.37	NA	3.6186104
1290	1	160109656	160109656	G	C	intronic	ATP1A2	NA	NA	NA	intronic	ENSG00000018625	NA	NA	NA	NA	NA	1q23.2	NA	NA	NA	NA	rs17846718	0.1	0.1	0.095	0.0960463	0.1173	0.0655	0.1297	0.0991	0.0777	0.12	0.05	0.12	0.09	0.1296	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.809041	NA	NA	0.134535	0.111439	NA	0.181	NA	3.618565
1290	1	152538358	152538358	G	C	UTR3	LCE3E	NM_178435:c.*48C>G	NA	NA	UTR3	ENSG00000185966	ENST00000368789:c.*48C>G	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs17659359	0.25	0.25	0.217	0.258586	0.2187	0.244	0.3343	0.2141	0.3211	0.22	0.27	0.3	0.23	0.265	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.359524	NA	NA	0.231091	0.210036	NA	0.203	NA	3.6185424
1290	4	183950033	183950033	T	C	intergenic	DCTD,FAM92A1P2	dist=111403;dist=8785	NA	NA	ncRNA_exonic	ENSG00000250636	NA	NA	NA	NA	NA	4q35.1	NA	NA	NA	NA	rs2714534	0.37	0.37	0.336	0.365016	0.3817	0.3522	0.4193	0.2474	0.4816	0.41	0.39	0.36	0.27	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.204213	NA	NA	NA	NA	NA	0.399	NA	3.6183
1290	8	142160829	142160829	T	G	intronic	DENND3	NA	NA	NA	intronic	ENSG00000105339	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs35212078	0.29	0.29	0.277	0.26877	0.3817	0.1994	0.2378	0.2511	0.2699	0.39	0.21	0.26	0.26	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.768643	NA	NA	NA	NA	NA	0.21	NA	3.6183
1290	12	8203273	8203273	T	G	intronic	FOXJ2	NA	NA	NA	intronic	ENSG00000065970	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs17801353	0.25	0.25	0.235	0.218251	0.3817	0.1389	0.2147	0.1104	0.2802	0.39	0.16	0.26	0.13	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.060728	NA	NA	NA	NA	NA	0.312	NA	3.6183
1290	12	66933149	66933149	C	T	intronic	GRIP1	NA	NA	NA	intronic	ENSG00000155974	NA	NA	NA	NA	NA	12q14.3	NA	NA	NA	NA	rs10219689	0.46	0.46	0.47	0.473243	0.3817	0.502	0.4697	0.4924	0.5143	0.38	0.49	0.48	0.52	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.496762	NA	NA	NA	NA	NA	0.442	NA	3.6183
1290	12	133352702	133352702	A	C	intronic	GOLGA3	NA	NA	NA	intronic	ENSG00000090615	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs72624270	0.27	0.27	0.229	0.235423	0.3817	0.3185	0.1888	0.0605	0.2689	0.39	0.31	0.2	0.08	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.760869	NA	NA	NA	NA	NA	0.203	NA	3.6183
1290	1	160109636	160109636	C	G	intronic	ATP1A2	NA	NA	NA	intronic	ENSG00000018625	NA	NA	NA	NA	NA	1q23.2	NA	NA	NA	NA	rs17846717	0.1	0.1	0.087	0.096246	0.1173	0.0665	0.1297	0.0991	0.0777	0.12	0.06	0.12	0.09	0.1297	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.207668	NA	NA	0.134767	0.111439	NA	0.188	NA	3.618233
1290	2	210882171	210882171	A	T	intronic	RPE	NA	NA	NA	intronic	ENSG00000197713	NA	NA	NA	Score=243;Name=lod=13	NA	2q34	NA	NA	NA	NA	rs2075116	0.4	0.4	0.354	0.38139	0.4821	0.4752	0.5202	0.0711	0.502	0.49	0.49	0.47	0.1	0.4496	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.92122	2.92122	NA	0.450116	0.143214	NA	0.312	NA	3.618184
1290	13	34409603	34409603	T	G	intronic	RFC3	NA	NA	NA	intronic	ENSG00000133119	NA	NA	NA	NA	NA	13q13.2	NA	NA	NA	NA	rs3135629	0.28	0.28	0.295	0.307109	0.0875	0.3363	0.3415	0.4735	0.2536	0.09	0.36	0.31	0.48	0.2085	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.167771	NA	NA	0.085886	0.437785	NA	0.203	NA	3.618114
1290	7	142168429	142168429	A	G	intergenic	LOC730441,MTRNR2L6	dist=196361;dist=205702	NA	NA	exonic	ENSG00000230099	NA	synonymous SNV	ENSG00000230099:ENST00000454561:exon2:c.T294C:p.N98N	NA	NA	7q34	NA	NA	Name=17	NA	rs55634899	0.91	0.91	0.927	0.993011	1	1	0.9971	0.975	1	0.91	0.94	0.9	0.87	0.882	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.131407	NA	NA	NA	NA	NA	0.899	NA	3.618
1290	21	22910116	22910116	C	T	intronic	NCAM2	NA	NA	NA	intronic	ENSG00000154654	NA	NA	NA	NA	Name=Longevity	21q21.1	NA	NA	NA	NA	rs2826891	0.41	0.41	0.379	0.388778	0.4732	0.1736	0.4568	0.5287	0.2863	0.48	0.19	0.52	0.47	0.4345	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.186633	NA	NA	0.474372	0.492183	NA	0.319	NA	3.617928
1290	8	17199033	17199033	G	A	intronic	MTMR7	NA	NA	NA	intronic	ENSG00000003987	NA	NA	NA	NA	NA	8p22	NA	NA	NA	NA	rs4921757	0.07	0.07	0.044	0.04373	0.1461	0.002	0.062	0.0076	0.0174	0.15	0.0035	0.07	0.01	0.0945	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.753079	NA	NA	0.141628	0.029732	NA	0.08	NA	3.617772
1290	2	74595014	74595014	G	A	intronic	DCTN1	NA	NA	NA	intronic	ENSG00000204843	NA	NA	NA	NA	NA	2p13.1	NA	NA	NA	NA	rs909177	0.2	0.2	0.213	0.199681	0.1223	0.4256	0.1311	0.112	0.2137	0.12	0.45	0.14	0.09	0.1446	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.621487	NA	NA	0.115581	0.11507	NA	0.145	NA	3.617519
1290	3	54615971	54615971	A	G	intronic	CACNA2D3	NA	NA	NA	intronic	ENSG00000157445	NA	NA	NA	NA	NA	3p14.3	NA	NA	NA	NA	rs6782115	0.36	0.36	0.366	0.352436	0.3827	0.2758	0.4654	0.4304	0.2147	0.39	0.27	0.45	0.37	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.857677	NA	NA	NA	NA	NA	0.442	NA	3.6173
1290	8	99019930	99019930	G	A	intronic	MATN2	NA	NA	NA	intronic	ENSG00000132561	NA	NA	NA	NA	NA	8q22.2	NA	NA	NA	NA	rs11775531	0.2	0.2	0.187	0.160343	0.3827	0.002	0.2176	0.1225	0.1053	0.39	0.0017	0.26	0.11	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.856285	NA	NA	NA	NA	NA	0.181	NA	3.6173
1290	17	2883500	2883500	A	G	intronic	RAP1GAP2	NA	NA	NA	intronic	ENSG00000132359	NA	NA	NA	NA	NA	17p13.3	NA	NA	NA	NA	rs4790400	0.45	0.45	0.444	0.440495	0.3827	0.4415	0.3963	0.6301	0.274	0.37	0.41	0.4	0.66	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.511074	NA	NA	NA	NA	NA	0.442	NA	3.6173
1290	20	4843370	4843370	C	T	intronic	SLC23A2	NA	NA	NA	intronic	ENSG00000089057	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs3737321	0.46	0.46	0.495	0.496006	0.3827	0.244	0.3746	0.9228	0.3814	0.38	0.23	0.38	0.89	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.094698	NA	NA	NA	NA	NA	0.529	NA	3.6173
1290	1	203817549	203817549	T	C	intronic	ZC3H11A	NA	NA	NA	intronic	ENSG00000058673	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs12086293	0.09	0.09	0.083	0.0872604	0.1282	0.0357	0.0562	0.112	0.0869	0.13	0.04	0.08	0.08	0.1179	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.249238	NA	NA	0.137125	0.125057	ID=COSN163398;OCCURENCE=1(breast)	0.058	NA	3.616775
1290	8	136659195	136659195	C	T	intronic	KHDRBS3	NA	NA	NA	intronic	ENSG00000131773	NA	NA	NA	NA	NA	8q24.23	NA	NA	Name=34	NA	rs28621864	0.38	0.38	0.319	0.389776	0.4592	0.4524	0.4611	0.1377	0.544	0.46	0.43	0.48	0.13	0.4596	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.130181	NA	NA	0.464535	0.201997	NA	0.239	NA	3.616665
1290	19	43375870	43375870	G	T	intronic	PSG1	NA	NA	NA	intronic	ENSG00000231924	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs28579274	0.2	0.2	0.144	0.252596	0.0994	0.4147	0.1816	0.1944	0.3722	0.1	0.4	0.12	0.17	0.1837	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.240448	NA	NA	0.100256	0.162881	NA	0.181	NA	3.616644
1290	2	44123759	44123759	G	A	intronic	LRPPRC	NA	NA	NA	intronic	ENSG00000138095	NA	NA	NA	NA	NA	2p21	NA	NA	NA	NA	rs3795859	0.18	0.18	0.159	0.205072	0.1133	0.4573	0.1873	0.0061	0.3211	0.11	0.44	0.15	0.01	0.1599	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.85787	NA	NA	0.110465	0.027236	NA	0.174	NA	3.616335
1290	3	38812708	38812708	C	T	intronic	SCN10A	NA	NA	NA	intronic	ENSG00000185313	NA	NA	NA	NA	NA	3p22.2	NA	NA	NA	NA	rs4420804	0.39	0.39	0.377	0.416334	0.3837	0.3085	0.5043	0.4629	0.4356	0.38	0.29	0.47	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.54783	NA	NA	NA	NA	NA	0.435	NA	3.6163
1290	7	16890344	16890344	T	A	intergenic	AGR2,AGR3	dist=45606;dist=8686	NA	NA	ncRNA_exonic	ENSG00000270593	NA	NA	NA	NA	NA	7p21.1	NA	NA	NA	NA	rs11769432	0.44	0.44	0.44	0.482029	0.3837	0.4206	0.3501	0.6316	0.5378	0.37	0.44	0.35	0.63	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.215698	NA	NA	NA	NA	NA	0.493	NA	3.6163
1290	8	20068619	20068619	A	G	intronic	ATP6V1B2	NA	NA	NA	intronic	ENSG00000147416	NA	NA	NA	NA	NA	8p21.3	NA	NA	NA	NA	rs9325865	0.43	0.43	0.403	0.430511	0.3837	0.6538	0.4308	0.2814	0.4499	0.39	0.64	0.45	0.25	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.390255	NA	NA	NA	NA	NA	0.493	NA	3.6163
1290	15	41828571	41828571	A	T	intronic	RPAP1	NA	NA	NA	intronic	ENSG00000103932	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs2297383	0.28	0.28	0.264	0.276158	0.3837	0.1746	0.4236	0.1604	0.3221	0.39	0.16	0.41	0.17	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.143087	NA	NA	NA	NA	NA	0.246	NA	3.6163
1290	22	20127554	20127554	A	G	intronic	ZDHHC8	NA	NA	NA	intronic	ENSG00000099904	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs175174	0.49	0.49	0.464	0.520567	0.3837	0.6895	0.5403	0.4864	0.5194	0.38	0.66	0.49	0.48	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.223903	NA	NA	NA	NA	NA	0.341	NA	3.6163
1290	14	22392626	22392626	A	C	intergenic	OR4E2,DAD1	dist=258388;dist=641181	NA	NA	exonic	ENSG00000211792	NA	nonsynonymous SNV	ENSG00000211792:ENST00000390440:exon2:c.A149C:p.Q50P	NA	NA	14q11.2	NA	NA	NA	NA	rs10140810	0.48	0.48	0.492	0.465455	0.3956	0.504	0.513	0.5083	0.4059	0.41	0.55	0.46	0.51	0.4268	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.479243	NA	0.22	0.39514	0.467339	NA	0.529	NA	3.6157934
1290	4	172035317	172035317	A	C	intergenic	LOC100506122,GALNTL6	dist=55006;dist=699258	NA	NA	ncRNA_exonic	ENSG00000249525	NA	NA	NA	NA	NA	4q34.1	NA	NA	NA	NA	rs1396232	0.47	0.47	0.474	0.505591	0.3847	0.4216	0.5591	0.6657	0.4622	0.39	0.4	0.55	0.62	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.176293	NA	NA	NA	NA	NA	0.623	NA	3.6153
1290	6	33232055	33232055	G	A	intronic	VPS52	NA	NA	NA	intronic	ENSG00000223501	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs213202	0.4	0.4	0.425	0.411741	0.3847	0.5794	0.379	0.3321	0.3978	0.37	0.61	0.32	0.26	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.575625	NA	NA	NA	NA	NA	0.37	NA	3.6153
1290	10	21108247	21108247	C	T	intronic	NEBL	NA	NA	NA	intronic	ENSG00000078114	NA	NA	NA	NA	NA	10p12.31	NA	NA	NA	NA	rs1006362	0.52	0.52	0.532	0.553115	0.3847	0.6369	0.3689	0.6884	0.5879	0.36	0.66	0.43	0.69	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.500019	NA	NA	NA	NA	NA	0.522	NA	3.6153
1290	10	23393226	23393226	C	G	intronic	MSRB2	NA	NA	NA	intronic	ENSG00000148450	NA	NA	NA	NA	NA	10p12.2	NA	NA	NA	NA	rs1555805	0.39	0.39	0.378	0.411142	0.3847	0.3502	0.3746	0.5061	0.3988	0.41	0.31	0.38	0.48	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.820753	NA	NA	NA	NA	NA	0.406	NA	3.6153
1290	12	9095226	9095226	T	C	intronic	M6PR	NA	NA	NA	intronic	ENSG00000003056	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs1805731	0.27	0.27	0.242	0.274561	0.3847	0.0397	0.4395	0.2776	0.2822	0.37	0.02	0.45	0.28	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.99731	NA	NA	NA	NA	NA	0.232	NA	3.6153
1290	16	74660174	74660174	G	A	intronic	RFWD3	NA	NA	NA	intronic	ENSG00000168411	NA	NA	NA	NA	NA	16q23.1	NA	NA	NA	NA	rs12933037	0.41	0.41	0.419	0.382188	0.3847	0.4603	0.2651	0.5008	0.2219	0.38	0.43	0.3	0.52	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.324156	NA	NA	NA	NA	NA	0.435	NA	3.6153
1290	16	84472972	84472972	G	A	intronic	ATP2C2	NA	NA	NA	intronic	ENSG00000064270	NA	NA	NA	NA	NA	16q24.1	NA	NA	NA	NA	rs247905	0.34	0.34	0.309	0.303914	0.3847	0.3472	0.2983	0.2209	0.2924	0.39	0.35	0.33	0.27	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.083957	NA	NA	NA	NA	ID=COSN165276;OCCURENCE=1(breast)	0.326	NA	3.6153
1290	19	50493120	50493120	T	C	intronic	VRK3	NA	NA	NA	intronic	ENSG00000105053	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs283517	0.62	0.62	0.646	0.652157	0.3847	0.8026	0.5504	0.8253	0.6104	0.37	0.8	0.57	0.83	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.439573	NA	NA	NA	NA	NA	0.558	NA	3.6153
1290	16	1825774	1825774	T	C	intronic	EME2	NA	NA	NA	intronic	ENSG00000197774	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs13339350	0.16	0.16	0.134	0.155751	0.1272	0.252	0.0951	0.062	0.2556	0.13	0.28	0.13	0.07	0.1412	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.344834	NA	NA	0.116395	0.053433	NA	0.094	NA	3.615205
1290	5	5186416	5186416	T	G	intronic	ADAMTS16	NA	NA	NA	intronic	ENSG00000145536	NA	NA	NA	NA	NA	5p15.32	NA	NA	NA	NA	rs62339905	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.385	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.949098	NA	NA	NA	NA	NA	0.746	NA	3.615
1291	4	37848530	37848530	T	G	intronic	PGM2	NA	NA	NA	intronic	ENSG00000169299	NA	NA	NA	NA	NA	4p14	NA	NA	NA	NA	rs6814767	0.21	0.21	NA	0.217851	0.1948	0.1081	0.147	0.4448	0.0982	0.19	0.12	0.14	0.39	0.1904	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.707794	NA	NA	NA	NA	NA	0.254	NA	3.6148
1291	11	6424856	6424856	C	T	intronic	APBB1	NA	NA	NA	intronic	ENSG00000166313	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs2682093	0.13	0.13	0.127	0.157748	0.1173	0.005	0.0994	0.329	0.1667	0.1	0.0035	0.11	0.34	0.1358	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.04494	NA	NA	0.132216	0.2801	NA	0.159	NA	3.614684
1291	2	197594203	197594203	G	C	intronic	CCDC150	NA	NA	NA	UTR3	ENSG00000144395	ENST00000424427:c.*734G>C,ENST00000448409:c.*50G>C	NA	NA	NA	NA	2q33.1	NA	Name=p300,HDAC2_(SC-6296),SP1,HNF4A,FOSL2	NA	NA	rs2577580	0.84	0.84	0.82	0.828275	0.7584	0.9702	0.8487	0.7458	0.8507	0.77	0.98	0.83	0.78	0.7936	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.803043	NA	NA	NA	NA	NA	0.79	NA	3.6146667
1291	11	6630410	6630410	T	C	intronic	ILK	NA	NA	NA	ncRNA_intronic	ENSG00000254641	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs11826498	0.15	0.15	0.123	0.120807	0.2565	0.0804	0.183	0.0204	0.1145	0.26	0.09	0.19	0.03	0.2074	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.923786	1.923786	NA	0.254772	0.058383	NA	0.152	NA	3.6146613
1291	4	146048554	146048554	T	C	intronic	ABCE1	NA	NA	NA	intronic	ENSG00000164163	NA	NA	NA	NA	NA	4q31.21	NA	NA	NA	NA	rs4148234	0.23	0.23	0.209	0.201677	0.3857	0.1349	0.3141	0.0159	0.2526	0.38	0.17	0.29	0.02	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.807101	NA	NA	NA	NA	NA	0.246	NA	3.6143
1291	8	61300510	61300510	T	C	intergenic	CA8,RAB2A	dist=106556;dist=128959	NA	NA	ncRNA_exonic	ENSG00000226301	NA	NA	NA	NA	NA	8q12.1	NA	NA	NA	NA	rs10957133	0.56	0.56	0.581	0.598043	0.3857	0.5694	0.4654	0.9266	0.4959	0.38	0.53	0.51	0.91	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.176749	NA	NA	NA	NA	NA	0.594	NA	3.6143
1291	12	9085099	9085099	G	A	intronic	PHC1	NA	NA	NA	intronic	ENSG00000111752	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs887783	0.28	0.28	0.24	0.287141	0.3857	0.0407	0.4481	0.3207	0.2802	0.37	0.02	0.46	0.31	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.207508	NA	NA	NA	NA	NA	0.217	NA	3.6143
1291	15	42364724	42364724	A	G	intronic	PLA2G4D	NA	NA	NA	intronic	ENSG00000159337	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs1668585	0.38	0.38	0.391	0.385383	0.3857	0.3958	0.2839	0.4365	0.3773	0.37	0.39	0.29	0.42	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.429954	NA	NA	NA	NA	NA	0.457	NA	3.6143
1291	22	18304695	18304695	A	G	intronic	MICAL3	NA	NA	NA	intronic	ENSG00000243156	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs5992112	0.39	0.39	0.382	0.386382	0.3857	0.1736	0.2695	0.6876	0.2822	0.38	0.18	0.3	0.7	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.441831	NA	NA	NA	NA	NA	0.507	NA	3.6143
1291	22	37707962	37707962	C	T	intronic	CYTH4	NA	NA	NA	intronic	ENSG00000100055	NA	NA	NA	NA	NA	22q13.1	NA	NA	NA	NA	rs2269591	0.39	0.39	0.364	0.437101	0.3857	0.5546	0.3458	0.2352	0.7065	0.39	0.55	0.35	0.24	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.465568	NA	NA	NA	NA	NA	0.217	NA	3.6143
1291	22	38481516	38481516	G	A	intronic	BAIAP2L2	NA	NA	NA	intronic	ENSG00000128298	NA	NA	NA	NA	NA	22q13.1	NA	NA	NA	NA	rs9610902	0.35	0.35	0.314	0.364018	0.3857	0.4256	0.4524	0.121	0.544	0.38	0.41	0.48	0.14	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.508145	NA	NA	NA	NA	NA	0.457	NA	3.6143
1291	4	102992517	102992517	T	C	intronic	BANK1	NA	NA	NA	intronic	ENSG00000153064	NA	NA	NA	NA	NA	4q24	NA	NA	NA	NA	rs34184671	0.25	0.25	0.208	0.247005	0.1918	0.2748	0.3314	0.2738	0.1789	0.18	0.28	0.3	0.27	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.24111	NA	NA	0.193955	0.263728	NA	0.326	NA	3.614245
1291	8	72938357	72938357	A	C	ncRNA_intronic	LOC100132891	NA	NA	NA	intronic	ENSG00000104321,ENSG00000235531	NA	NA	NA	NA	NA	8q13.3	NA	NA	NA	NA	rs2305018	0.25	0.25	0.225	0.210064	0.2286	0.3413	0.2666	0.1256	0.1299	0.25	0.37	0.26	0.12	0.2463	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.515157	NA	NA	0.244359	0.159782	NA	0.232	NA	3.6140743
1291	21	46047925	46047925	G	T	exonic	KRTAP10-9	NA	synonymous SNV	KRTAP10-9:NM_198690:exon1:c.G837T:p.P279P	exonic	ENSG00000221837	NA	synonymous SNV	ENSG00000221837:ENST00000397911:exon1:c.G837T:p.P279P	NA	NA	21q22.3	NA	NA	NA	NA	rs9979457	0.64	0.64	0.617	0.632788	0.7107	0.6627	0.6715	0.5212	0.6452	0.71	0.63	0.67	0.53	0.6658	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.770699	NA	NA	0.676114	0.543269	NA	0.464	NA	3.6140526
1291	3	97983257	97983257	C	G	exonic	OR5H6	NA	synonymous SNV	OR5H6:NM_001005479:exon1:c.C129G:p.L43L	exonic	ENSG00000230301	NA	synonymous SNV	ENSG00000230301:ENST00000383696:exon1:c.C129G:p.L43L	NA	NA	3q11.2	NA	NA	NA	NA	rs2132894	0.72	0.72	0.733	0.708866	0.6909	0.621	0.6268	0.885	0.638	0.69	0.68	0.59	0.89	0.681	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.680448	NA	NA	0.680856	0.858148	ID=COSM1179810;OCCURENCE=1(prostate)	0.696	NA	3.6139106
1291	18	56400826	56400826	T	C	intronic	MALT1	NA	NA	NA	ncRNA_intronic	ENSG00000267476	NA	NA	NA	NA	NA	18q21.32	NA	NA	NA	NA	rs28740963	0.22	0.22	0.191	0.245008	0.2187	0.1796	0.3127	0.2413	0.2965	0.21	0.18	0.3	0.24	0.2604	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.392394	1.392394	NA	0.240633	0.262835	ID=COSN165666;OCCURENCE=1(NS)	0.21	NA	3.6136003
1291	16	31283323	31283323	C	G	intronic	ITGAM	NA	NA	NA	intronic	ENSG00000169896	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs35472514	0.08	0.08	0.079	0.121006	0.1392	0.0149	0.0951	0.1165	0.2362	0.14	0.0017	0.09	0.09	0.125	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.496683	NA	NA	0.122214	0.092583	NA	0.08	NA	3.613586
1291	1	203807233	203807233	T	C	intronic	ZC3H11A	NA	NA	NA	intronic	ENSG00000058673	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs12078328	0.09	0.09	0.078	0.0870607	0.1282	0.0357	0.0562	0.1112	0.0869	0.13	0.04	0.08	0.08	0.1209	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.125702	NA	NA	0.137442	0.125057	ID=COSN163397;OCCURENCE=1(breast)	0.058	NA	3.613458
1291	9	137674488	137674488	G	A	intronic	COL5A1	NA	NA	NA	intronic	ENSG00000130635	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs41310213	0.14	0.14	0.143	0.152955	0.1252	0.1329	0.0807	0.2806	0.0808	0.13	0.1	0.07	0.26	0.1349	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.444779	NA	NA	0.126512	0.256015	NA	0.232	NA	3.613388
1291	2	3502910	3502910	G	T	intronic	ADI1	NA	NA	NA	intronic	ENSG00000182551	NA	NA	NA	NA	NA	2p25.3	NA	NA	NA	NA	rs58219575	NA	NA	NA	0.542732	0.3867	0.4871	0.4481	0.8525	0.409	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.831337	NA	NA	NA	NA	NA	NA	NA	3.6133
1291	7	91659150	91659150	C	G	intronic	AKAP9	NA	NA	NA	intronic	ENSG00000127914	NA	NA	NA	NA	NA	7q21.2	NA	NA	NA	NA	rs17164315	0.36	0.36	0.358	0.373802	0.3867	0.1617	0.3573	0.5076	0.41	0.39	0.17	0.38	0.53	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.59345	NA	NA	NA	NA	NA	0.413	NA	3.6133
1291	7	91752690	91752690	C	A	intronic	CYP51A1	NA	NA	NA	intronic	ENSG00000001630	NA	NA	NA	NA	NA	7q21.2	NA	NA	NA	NA	rs2269727	0.35	0.35	0.37	0.359824	0.3867	0.1617	0.3588	0.4539	0.41	0.39	0.17	0.38	0.49	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.200204	NA	NA	NA	NA	NA	0.406	NA	3.6133
1291	8	59498614	59498614	A	G	intronic	NSMAF	NA	NA	NA	intronic	ENSG00000035681	NA	NA	NA	NA	NA	8q12.1	NA	NA	NA	NA	rs6995115	0.45	0.45	0.469	0.471446	0.3867	0.6022	0.2594	0.5794	0.4284	0.37	0.58	0.3	0.56	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.426511	NA	NA	NA	NA	NA	0.406	NA	3.6133
1291	20	61527480	61527480	T	C	intronic	DIDO1	NA	NA	NA	intronic	ENSG00000101191	NA	NA	NA	NA	NA	20q13.33	NA	NA	NA	NA	rs755740	0.48	0.48	0.469	0.495407	0.3867	0.627	0.5058	0.4675	0.502	0.36	0.61	0.52	0.46	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.682	NA	NA	NA	NA	NA	0.391	NA	3.6133
1291	21	43710096	43710096	G	T	intronic	ABCG1	NA	NA	NA	intronic	ENSG00000160179	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs2234721	0.34	0.34	0.304	0.324681	0.3867	0.3353	0.3689	0.2292	0.3476	0.38	0.35	0.43	0.2	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.359327	NA	NA	NA	NA	NA	0.384	NA	3.6133
1291	4	9998605	9998605	T	C	intronic	SLC2A9	NA	NA	NA	intronic	ENSG00000109667	NA	NA	NA	NA	NA	4p16.1	NA	Name=FOSL2,FOXA1_(C-20),FOXA1_(SC-101058),GR	Name=43	NA	rs28592748	0.84	0.84	0.845	0.820687	0.8002	0.9722	0.7219	0.7784	0.8129	0.82	0.99	0.73	0.78	0.8017	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.679983	NA	NA	0.785116	0.776441	NA	0.841	NA	3.612984
1291	17	39471960	39471960	G	A	upstream	KRTAP17-1	NA	NA	NA	upstream	ENSG00000186860	NA	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs117338110	0.03	0.03	0.018	0.0173722	0.0537	NA	0.0418	0.0015	0.002	0.05	0.01	0.04	0.002	NA	0.054	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.318435	NA	NA	NA	NA	NA	0.036	NA	3.6129666
1291	3	51978640	51978640	G	A	intronic	PARP3	NA	NA	NA	intronic	ENSG00000041880	NA	NA	NA	NA	NA	3p21.2	NA	NA	NA	NA	rs4687792	0.2	0.2	0.187	0.167931	0.1123	0.4117	0.3069	0.0061	0.0941	0.12	0.43	0.28	0.01	0.1684	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.067465	NA	NA	0.106358	0.023843	NA	0.152	NA	3.612942
1291	5	141018454	141018454	C	G	intronic	RELL2	NA	NA	NA	intronic	ENSG00000164620	NA	NA	NA	NA	NA	5q31.3	NA	NA	NA	NA	rs11741647	0.13	0.13	0.122	0.130391	0.1113	0.0982	0.1758	0.1172	0.1687	0.13	0.11	0.16	0.13	0.143	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.714518	NA	NA	0.132791	0.120291	NA	0.101	NA	3.612909
1291	21	46047710	46047710	T	C	exonic	KRTAP10-9	NA	synonymous SNV	KRTAP10-9:NM_198690:exon1:c.T622C:p.L208L	exonic	ENSG00000221837	NA	synonymous SNV	ENSG00000221837:ENST00000397911:exon1:c.T622C:p.L208L	NA	NA	21q22.3	NA	NA	NA	NA	rs8131142	0.65	0.65	0.588	0.648163	0.7107	0.6637	0.6787	0.5711	0.6503	0.71	0.63	0.68	0.58	0.67	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.554189	NA	NA	0.67314	0.571266	NA	0.138	NA	3.6128266
1291	3	31837204	31837204	A	T	intronic	OSBPL10	NA	NA	NA	ncRNA_exonic	ENSG00000223965	NA	NA	NA	NA	NA	3p23	NA	NA	NA	NA	rs2068100	0.78	0.78	0.773	0.788538	0.7207	0.8085	0.755	0.8729	0.7474	0.72	0.78	0.73	0.89	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.630025	NA	NA	NA	NA	NA	0.862	NA	3.6126333
1291	12	992229	992229	C	T	intronic	WNK1	NA	NA	NA	intronic	ENSG00000060237	NA	NA	NA	NA	NA	12p13.33	NA	NA	NA	NA	rs34032084	0.1	0.1	0.109	0.101038	0.1302	0.1091	0.0793	0.0356	0.1667	0.13	0.11	0.1	0.04	0.1183	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.353095	2.353095	NA	0.13907	0.046754	ID=COSM147389;OCCURENCE=1(stomach)	0.181	NA	3.61243
1291	3	164699998	164699998	C	T	intronic	SI	NA	NA	NA	intronic	ENSG00000090402	NA	NA	NA	NA	NA	3q26.1	NA	NA	NA	NA	rs41273561	0.18	0.18	0.2	0.192492	0.1113	0.0665	0.0908	0.4342	0.1513	0.1	0.07	0.1	0.48	0.1524	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.156261	NA	NA	0.123982	0.398409	NA	0.196	NA	3.612318
1291	2	113258671	113258671	G	A	intronic	TTL	NA	NA	NA	intronic	ENSG00000114999	NA	NA	NA	NA	NA	2q13	NA	NA	NA	NA	rs2438849	0.25	0.25	0.158	0.452276	0.3877	0.5476	0.3631	0.4637	0.4683	0.2	0.32	0.2	0.31	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.572341	NA	NA	NA	NA	NA	0.145	NA	3.6123
1291	3	184580917	184580917	A	G	intronic	VPS8	NA	NA	NA	intronic	ENSG00000156931	NA	NA	NA	NA	NA	3q27.2	NA	NA	NA	NA	rs3733165	0.56	0.56	0.556	0.588658	0.3877	0.6637	0.4726	0.7663	0.5603	0.4	0.63	0.5	0.75	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.652675	NA	NA	NA	NA	NA	0.616	NA	3.6123
1291	9	130167338	130167338	C	T	intronic	SLC2A8	NA	NA	NA	intronic	ENSG00000136856	NA	NA	NA	NA	NA	9q33.3	NA	NA	NA	NA	rs41302651	0.28	0.28	0.282	0.283347	0.3877	0.1567	0.2349	0.2632	0.3681	0.39	0.12	0.26	0.32	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.077684	NA	NA	NA	NA	NA	0.21	NA	3.6123
1291	9	130167569	130167569	T	C	intronic	SLC2A8	NA	NA	NA	intronic	ENSG00000136856	NA	NA	NA	NA	NA	9q33.3	NA	NA	NA	NA	rs3802363	0.28	0.28	0.28	0.283746	0.3877	0.1577	0.2349	0.2625	0.3701	0.39	0.12	0.26	0.32	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.75775	NA	NA	NA	NA	NA	0.21	NA	3.6123
1291	10	102780265	102780265	G	A	intronic	PDZD7	NA	NA	NA	intronic	ENSG00000186862	NA	NA	NA	NA	NA	10q24.31	NA	NA	NA	NA	rs7075659	0.22	0.22	0.169	0.205272	0.3877	0.0278	0.2983	0.1225	0.2464	0.37	0.04	0.35	0.12	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.344059	NA	NA	NA	NA	NA	0.304	NA	3.6123
1291	14	107122173	107122173	G	T	intergenic	LINC00221,NONE	dist=170644;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000253209	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs4268661	0.48	0.48	0.478	0.583267	0.3877	0.5317	0.4553	0.7557	0.6953	0.34	0.46	0.46	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.195619	NA	NA	NA	NA	NA	0.464	NA	3.6123
1291	14	107122186	107122186	A	G	intergenic	LINC00221,NONE	dist=170657;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000253209	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs4468504	0.51	0.51	0.468	0.583666	0.3877	0.5327	0.4553	0.7557	0.6963	0.38	0.49	0.49	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.067207	NA	NA	NA	NA	NA	0.464	NA	3.6123
1291	18	75147568	75147568	A	G	intergenic	GALR1,SALL3	dist=165472;dist=1592707	NA	NA	ncRNA_exonic	ENSG00000264736	NA	NA	NA	NA	NA	18q23	NA	NA	NA	NA	rs8087079	0.49	0.49	0.48	0.508586	0.3877	0.4881	0.5202	0.6241	0.4898	0.39	0.53	0.5	0.59	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.699074	NA	NA	NA	NA	NA	0.478	NA	3.6123
1291	18	75148016	75148016	G	A	intergenic	GALR1,SALL3	dist=165920;dist=1592259	NA	NA	ncRNA_exonic	ENSG00000264736	NA	NA	NA	NA	NA	18q23	NA	NA	NA	NA	rs1942596	0.5	0.5	0.482	0.519768	0.3877	0.4861	0.5288	0.6755	0.4734	0.39	0.52	0.5	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.705079	NA	NA	NA	NA	NA	0.449	NA	3.6123
1291	19	39957030	39957030	C	T	intronic	SUPT5H	NA	NA	NA	intronic	ENSG00000196235	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs4802030	0.46	0.46	0.46	0.493011	0.3877	0.4613	0.4006	0.621	0.5266	0.39	0.42	0.43	0.63	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.073759	NA	NA	NA	NA	NA	0.42	NA	3.6123
1291	19	39972766	39972766	G	A	intronic	TIMM50	NA	NA	NA	intronic	ENSG00000105197	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs62120691	0.46	0.46	0.47	0.492812	0.3877	0.4613	0.4049	0.618	0.5266	0.39	0.42	0.44	0.63	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.295987	1.295987	NA	NA	NA	NA	0.391	NA	3.6123
1291	19	56373578	56373578	C	G	intronic	NLRP4	NA	NA	NA	intronic	ENSG00000160505	NA	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs10853880	0.35	0.35	0.244	0.407748	0.3877	0.5	0.4207	0.3502	0.4018	0.3	0.5	0.33	0.25	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.937645	NA	NA	NA	NA	NA	NA	NA	3.6123
1291	20	36989269	36989269	C	T	intronic	LBP	NA	NA	NA	intronic	ENSG00000129988	NA	NA	NA	NA	NA	20q11.23	NA	NA	NA	NA	rs1780623	0.43	0.43	0.407	0.397564	0.3877	0.6905	0.4035	0.1626	0.4192	0.38	0.73	0.42	0.17	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.930339	NA	NA	NA	NA	NA	0.319	NA	3.6123
1291	7	87160561	87160561	A	G	intronic	ABCB1	NA	NA	NA	intronic	ENSG00000085563	NA	NA	NA	NA	NA	7q21.12	NA	NA	NA	NA	rs2032583	0.13	0.13	0.144	0.145367	0.1342	0.0694	0.1124	0.2035	0.18	0.13	0.06	0.13	0.22	0.1208	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.42272	NA	NA	0.132705	0.170377	NA	0.174	NA	3.612295
1291	17	30376461	30376461	G	A	intronic	LRRC37B	NA	NA	NA	intronic	ENSG00000185158	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs2470260	NA	NA	0.17	0.227636	0.1551	0.0407	0.1282	0.5257	0.1626	NA	NA	NA	NA	0.1228	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.458229	NA	NA	0.109895	0.342707	NA	0.188	NA	3.612205
1291	8	139165272	139165272	T	C	exonic	FAM135B	NA	synonymous SNV	FAM135B:NM_015912:exon13:c.A1446G:p.P482P	exonic	ENSG00000147724	NA	synonymous SNV	ENSG00000147724:ENST00000276737:exon13:c.A1446G:p.P482P,ENSG00000147724:ENST00000395297:exon13:c.A1446G:p.P482P	NA	NA	8q24.23	NA	NA	NA	NA	rs7835712	0.67	0.67	0.717	0.720847	0.6869	0.7718	0.7464	0.6853	0.7331	0.62	0.72	0.67	0.7	0.7012	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.114998	NA	NA	0.666546	0.708897	NA	0.449	NA	3.6120206
1291	5	162910199	162910199	G	C	intronic	HMMR	NA	NA	NA	ncRNA_exonic	ENSG00000251018	NA	NA	NA	NA	NA	5q34	NA	NA	NA	NA	rs184181	0.19	0.19	0.193	0.208666	0.2535	0.0724	0.1772	0.2678	0.2454	0.25	0.05	0.2	0.24	0.2315	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.119732	NA	NA	0.23656	0.268724	NA	0.225	NA	3.6117733
1291	2	207527608	207527608	T	C	intronic	DYTN	NA	NA	NA	intronic	ENSG00000232125	NA	NA	NA	NA	NA	2q33.3	NA	NA	NA	NA	rs2359680	0.1	0.1	0.092	0.0754792	0.1402	0.002	0.1066	0.1089	0.0174	0.14	0.0017	0.12	0.12	0.113	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.111037	NA	NA	0.135187	0.105318	NA	0.116	NA	3.611613
1291	5	96066576	96066576	C	G	intronic	CAST	NA	NA	NA	intronic	ENSG00000153113	NA	NA	NA	NA	NA	5q15	NA	NA	NA	NA	rs17400741	0.07	0.07	0.052	0.0585064	0.1451	NA	0.1066	0.0038	0.0695	0.14	NA	0.1	0.0041	0.1033	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.196293	NA	NA	0.140116	0.024285	NA	0.159	NA	3.611484
1291	4	39116775	39116775	A	T	intronic	KLHL5	NA	NA	NA	ncRNA_intronic	ENSG00000249207	NA	NA	NA	Score=560;Name=lod=251	NA	4p14	NA	NA	NA	NA	rs10026775	0.54	0.54	0.528	0.492612	0.5765	0.495	0.5965	0.3411	0.5348	0.59	0.52	0.63	0.41	0.5596	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.981149	1.981149	NA	0.585814	0.391739	NA	0.529	NA	3.6114193
1291	2	32961691	32961691	C	T	intronic	TTC27	NA	NA	NA	intronic	ENSG00000018699	NA	NA	NA	NA	NA	2p22.3	NA	NA	NA	NA	rs17497801	0.33	0.33	0.306	0.291134	0.3887	0.37	0.3617	0.171	0.2219	0.41	0.35	0.38	0.16	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.120004	NA	NA	NA	NA	ID=COSN166059;OCCURENCE=4(breast)	0.268	NA	3.6113
1291	2	64794945	64794945	G	A	intronic	AFTPH	NA	NA	NA	intronic	ENSG00000119844	NA	NA	NA	NA	NA	2p14	NA	NA	NA	NA	rs7598893	0.3	0.3	0.299	0.323882	0.3887	0.2083	0.304	0.3185	0.3978	0.38	0.2	0.34	0.29	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.157671	NA	NA	NA	NA	NA	0.333	NA	3.6113
1291	9	71827618	71827618	T	C	intronic	TJP2	NA	NA	NA	intronic	ENSG00000119139	NA	NA	NA	NA	NA	9q21.11	NA	NA	NA	NA	rs34883177	0.44	0.44	0.358	0.406949	0.3887	0.619	0.5821	0.1967	0.3671	0.38	0.66	0.56	0.21	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.106535	NA	NA	NA	NA	NA	0.319	NA	3.6113
1291	10	38537070	38537070	A	G	intergenic	LOC100129055,HSD17B7P2	dist=33797;dist=108238	NA	NA	ncRNA_intronic	ENSG00000226113	NA	NA	NA	NA	NA	10p11.1	NA	NA	NA	NA	rs1780145	0.42	0.42	0.419	0.399561	0.3887	0.5218	0.4467	0.4183	0.226	0.4	0.49	0.42	0.39	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.504264	NA	NA	NA	NA	NA	0.464	NA	3.6113
1291	12	127349838	127349838	T	C	intergenic	LOC387895,LOC440117	dist=93030;dist=4202	NA	NA	ncRNA_exonic	ENSG00000255923	NA	NA	NA	NA	NA	12q24.32	NA	NA	NA	NA	rs11610354	0.18	0.18	0.156	0.1877	0.3887	0.001	0.232	0.0303	0.3548	0.37	NA	0.26	0.03	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.615311	NA	NA	NA	NA	NA	0.123	NA	3.6113
1291	14	93125415	93125415	G	C	intronic	RIN3	NA	NA	NA	intronic	ENSG00000100599	NA	NA	NA	NA	NA	14q32.12	NA	NA	NA	NA	rs2295991	0.31	0.31	0.319	0.342053	0.3887	0.2073	0.2709	0.4463	0.3425	0.36	0.17	0.28	0.44	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.107271	NA	NA	NA	NA	NA	0.261	NA	3.6113
1291	18	55431330	55431330	T	C	intronic	ATP8B1	NA	NA	NA	intronic	ENSG00000081923	NA	NA	NA	NA	NA	18q21.31	NA	NA	NA	NA	rs11875119	0.36	0.36	0.316	0.361022	0.3887	0.2837	0.3847	0.3525	0.407	0.39	0.28	0.41	0.36	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.024628	NA	NA	NA	NA	NA	0.29	NA	3.6113
1291	18	75148028	75148028	A	C	intergenic	GALR1,SALL3	dist=165932;dist=1592247	NA	NA	ncRNA_exonic	ENSG00000264736	NA	NA	NA	NA	NA	18q23	NA	NA	NA	NA	rs1942595	0.51	0.51	0.489	0.527556	0.3887	0.4881	0.5317	0.7012	0.4734	0.39	0.53	0.5	0.68	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.264202	NA	NA	NA	NA	NA	0.464	NA	3.6113
1291	6	117639419	117639419	T	C	intronic	ROS1	NA	NA	NA	intronic	ENSG00000047936	NA	NA	NA	NA	NA	6q22.1	NA	NA	NA	NA	rs497186	0.1	0.1	0.093	0.0866613	0.1441	0.1032	0.098	0.0076	0.1094	0.15	0.11	0.09	0.01	0.1102	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.792122	NA	NA	0.134419	0.032002	NA	0.123	NA	3.611281
1291	19	43383651	43383651	C	T	intronic	PSG1	NA	NA	NA	intronic	ENSG00000231924	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs12463071	0.2	0.2	0.149	0.250998	0.1014	0.4187	0.1772	0.1899	0.3671	0.1	0.4	0.12	0.17	0.1831	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.481608	NA	NA	0.10429	0.164238	NA	0.196	NA	3.61121
1291	6	38746294	38746294	A	G	intronic	DNAH8	NA	NA	NA	intronic	ENSG00000124721	NA	NA	NA	NA	NA	6p21.2	NA	NA	NA	NA	rs1738259	0.32	0.32	0.305	0.328075	0.1988	0.4494	0.3991	0.3555	0.2485	0.21	0.46	0.35	0.32	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.029762	NA	NA	0.190101	0.312861	NA	0.406	NA	3.611099
1291	22	38075834	38075834	G	A	downstream	LGALS1	NA	NA	NA	downstream	ENSG00000100097	NA	NA	NA	NA	NA	22q13.1	NA	NA	NA	NA	rs41283239	0.09	0.09	0.092	0.116414	0.0557	0.001	0.0677	0.2746	0.1186	0.05	NA	0.09	0.26	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.171248	NA	NA	NA	NA	NA	0.109	NA	3.6109666
1291	19	48202125	48202125	C	G	intronic	GLTSCR1	NA	NA	NA	ncRNA_intronic	ENSG00000268746	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs7248050	0.84	0.84	0.844	0.854633	0.7227	0.9593	0.8228	0.9312	0.8016	0.74	0.95	0.77	0.94	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.656898	NA	NA	NA	NA	NA	0.899	NA	3.6106333
1291	17	33482522	33482522	G	A	intronic	UNC45B	NA	NA	NA	intronic	ENSG00000141161	NA	NA	NA	NA	NA	17q12	NA	NA	NA	NA	rs11869662	0.17	0.17	0.145	0.180711	0.1262	0.1895	0.1124	0.2753	0.1483	0.12	0.17	0.13	0.27	0.1433	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.869897	NA	NA	0.119884	0.21675	NA	0.196	NA	3.610616
1291	4	7668967	7668967	C	T	intronic	SORCS2	NA	NA	NA	intronic	ENSG00000184985	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs13129869	0.09	0.09	0.098	0.071885	0.1402	NA	0.072	0.1051	0.0307	0.14	NA	0.08	0.12	0.1059	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.292873	NA	NA	0.1434	0.104556	NA	0.087	NA	3.6105
1291	2	113321900	113321900	T	C	intronic	POLR1B	NA	NA	NA	intronic	ENSG00000125630	NA	NA	NA	NA	NA	2q13	NA	Name=GATA-2	NA	NA	rs41280572	0.33	0.33	0.308	0.328674	0.4722	0.4177	0.3761	0.0424	0.4427	0.46	0.37	0.39	0.05	0.426	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.650996	NA	NA	0.491395	0.118475	NA	0.399	NA	3.610405
1291	1	109714750	109714750	T	C	intronic	KIAA1324	NA	NA	NA	intronic	ENSG00000116299	NA	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	rs2297758	0.48	0.48	0.491	0.522364	0.3897	0.4901	0.4438	0.6989	0.5092	0.36	0.5	0.43	0.69	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.722407	NA	NA	NA	NA	NA	0.514	NA	3.6103
1291	4	184607970	184607970	T	C	intronic	TRAPPC11	NA	NA	NA	intronic	ENSG00000168538	NA	NA	NA	NA	NA	4q35.1	NA	NA	NA	NA	rs9312316	0.49	0.49	0.482	0.488818	0.3897	0.5337	0.5187	0.6596	0.2924	0.4	0.51	0.45	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.464587	NA	NA	NA	NA	NA	0.486	NA	3.6103
1291	5	6622017	6622017	T	G	intronic	NSUN2	NA	NA	NA	intronic	ENSG00000037474	NA	NA	NA	NA	NA	5p15.31	NA	NA	NA	NA	rs2303705	0.31	0.31	0.289	0.29373	0.3897	0.1607	0.3948	0.3434	0.1933	0.37	0.15	0.42	0.33	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.546295	NA	NA	NA	NA	NA	0.449	NA	3.6103
1291	22	37708004	37708004	T	C	intronic	CYTH4	NA	NA	NA	intronic	ENSG00000100055	NA	NA	NA	NA	NA	22q13.1	NA	NA	NA	NA	rs2269593	0.4	0.4	0.379	0.461861	0.3897	0.5952	0.3487	0.2905	0.7106	0.39	0.56	0.36	0.28	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.891932	NA	NA	NA	NA	NA	0.239	NA	3.6103
1291	1	11735841	11735841	C	A	intronic	MAD2L2	NA	NA	NA	intronic	ENSG00000116670	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs2233024	0.14	0.14	0.107	0.151957	0.1899	0.1488	0.196	0.0537	0.2178	0.19	0.13	0.2	0.04	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.13331	3.13331	NA	0.2	0.083092	NA	0.167	NA	3.6101
1291	2	20192931	20192931	G	A	intronic	MATN3	NA	NA	NA	ncRNA_intronic	ENSG00000227210	NA	NA	NA	NA	NA	2p24.1	NA	NA	NA	NA	rs35973216	0.25	0.25	0.266	0.227835	0.2237	0.2252	0.2262	0.261	0.1912	0.23	0.26	0.22	0.28	0.2489	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.379921	NA	NA	0.250673	0.238618	NA	0.152	NA	3.6100603
1291	11	18456511	18456511	G	A	intronic	LDHC	NA	NA	NA	intronic	ENSG00000166796	NA	NA	NA	NA	NA	11p15.1	NA	NA	NA	NA	rs73438666	0.14	0.14	0.147	0.140775	0.1252	0.0635	0.1556	0.2451	0.0849	0.11	0.05	0.15	0.28	0.1306	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.351967	NA	NA	0.134382	0.218693	NA	0.101	NA	3.609818
1291	5	52235854	52235854	T	A	intronic	ITGA1	NA	NA	NA	ncRNA_intronic	ENSG00000249899	NA	NA	NA	NA	NA	5q11.2	NA	NA	NA	NA	rs2447874	0.7	0.7	0.714	0.686901	0.7237	0.7014	0.67	0.6649	0.6759	0.73	0.69	0.67	0.7	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.005246	NA	NA	NA	NA	NA	0.645	NA	3.6096333
1291	12	133433300	133433300	C	T	intronic	CHFR	NA	NA	NA	intronic	ENSG00000072609	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs11147111	0.14	0.14	0.116	0.143171	0.2008	0.1171	0.255	0.0091	0.2127	0.21	0.1	0.23	0.01	0.1896	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.167967	NA	NA	NA	NA	NA	0.065	NA	3.6096
1291	12	56814563	56814563	G	A	intronic	TIMELESS	NA	NA	NA	intronic	ENSG00000111602	NA	NA	NA	NA	NA	12q13.3	NA	NA	NA	NA	rs66491720	0.07	0.07	0.054	0.0467252	0.1481	NA	0.0663	0.0045	0.0337	0.15	NA	0.08	0.01	0.1028	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.132175	NA	NA	0.139535	0.029278	NA	0.203	NA	3.609565
1291	3	64145493	64145493	G	A	intronic	PRICKLE2	NA	NA	NA	intronic	ENSG00000163637	NA	NA	NA	NA	NA	3p14.1	NA	NA	NA	NA	rs11720610	0.31	0.31	0.29	0.300519	0.3907	0.2351	0.2104	0.3207	0.3119	0.39	0.2	0.25	0.35	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.020811	NA	NA	NA	NA	NA	0.341	NA	3.6093
1291	5	76259350	76259350	T	C	intronic	CRHBP	NA	NA	NA	intronic	ENSG00000145708	NA	NA	NA	NA	NA	5q13.3	NA	NA	NA	NA	rs7728378	0.53	0.53	0.55	0.546326	0.3907	0.5347	0.3847	0.826	0.455	0.39	0.54	0.42	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.868954	NA	NA	NA	NA	NA	0.565	NA	3.6093
1291	11	124386739	124386739	T	C	intergenic	OR8B8,OR8B12	dist=75758;dist=25879	NA	NA	ncRNA_exonic	ENSG00000254646	NA	NA	NA	NA	NA	11q24.2	NA	NA	NA	NA	rs10893236	0.54	0.54	0.455	0.502995	0.3907	0.6915	0.5821	0.5408	0.317	0.39	0.69	0.57	0.56	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.850095	NA	NA	NA	NA	NA	0.37	NA	3.6093
1291	12	6619054	6619054	T	C	intronic	NCAPD2	NA	NA	NA	intronic	ENSG00000010292	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs7298053	0.32	0.32	0.273	0.30631	0.3907	0.3413	0.3401	0.1392	0.3855	0.39	0.34	0.39	0.14	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.83254	NA	NA	NA	NA	NA	0.268	NA	3.6093
1291	14	21468955	21468955	T	C	intronic	SLC39A2	NA	NA	NA	intronic	ENSG00000165794	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs12886630	0.47	0.47	0.449	0.484824	0.3907	0.374	0.5663	0.6581	0.4039	0.38	0.38	0.53	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.560454	NA	NA	NA	NA	NA	0.558	NA	3.6093
1291	14	55241941	55241941	G	C	intronic	SAMD4A	NA	NA	NA	intronic	ENSG00000020577	NA	NA	NA	NA	NA	14q22.2	NA	NA	NA	NA	rs2295824	0.34	0.34	0.324	0.363818	0.3907	0.3363	0.33	0.2595	0.5297	0.38	0.36	0.32	0.28	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.644551	NA	NA	NA	NA	NA	0.217	NA	3.6093
1291	15	25414437	25414437	G	A	intergenic	PAR1,SNORD115-1	dist=31237;dist=1433	NA	NA	ncRNA_intronic	ENSG00000224078	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs2714732	0.39	0.39	0.334	0.370008	0.3907	0.5089	0.4971	0.093	0.4898	0.39	0.53	0.51	0.12	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.083432	NA	NA	NA	NA	NA	0.355	NA	3.6093
1291	15	25414653	25414653	C	T	intergenic	PAR1,SNORD115-1	dist=31453;dist=1217	NA	NA	ncRNA_exonic	ENSG00000270814	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs2739833	0.44	0.44	0.4	0.41873	0.3907	0.6081	0.5086	0.1936	0.4928	0.39	0.64	0.52	0.21	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.090331	NA	NA	NA	NA	NA	0.399	NA	3.6093
1291	16	55862901	55862901	T	G	intronic	CES1	NA	NA	NA	intronic	ENSG00000198848	NA	NA	NA	NA	NA	16q12.2	NA	NA	NA	NA	rs3826189	NA	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3908	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.789799	NA	NA	NA	NA	NA	0.007	NA	3.6092
1291	3	14768534	14768534	A	G	intronic	C3orf20	NA	NA	NA	intronic	ENSG00000131379	NA	NA	NA	Score=346;Name=lod=34	NA	3p25.1	NA	NA	NA	NA	rs7636830	0.42	0.42	0.402	0.411941	0.4702	0.4048	0.3905	0.3495	0.4591	0.47	0.41	0.43	0.37	0.4541	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.012036	NA	NA	0.467093	0.358829	NA	0.304	NA	3.608607
1291	13	114537517	114537517	C	T	ncRNA_intronic	GAS6-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000233695	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs8191974	0.27	0.27	0.291	0.247804	0.3549	0.1796	0.3458	0.2088	0.1912	0.35	0.18	0.32	0.22	0.4005	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.351008	NA	NA	0.302693	0.216442	NA	0.283	NA	3.6085736
1291	22	50502650	50502650	G	A	intronic	MLC1	NA	NA	NA	intronic	ENSG00000100427	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs11568184	0.11	0.11	0.093	0.131789	0.1322	0.0923	0.1758	0.0598	0.2382	0.12	0.1	0.16	0.08	0.1292	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.50106	NA	NA	0.130044	0.069021	NA	0.065	NA	3.608556
1291	1	152710165	152710165	G	T	intergenic	C1orf68,KPRP	dist=17260;dist=20341	NA	NA	ncRNA_exonic	ENSG00000229713	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs11588950	0.28	0.28	0.289	0.26857	0.3917	0.1042	0.2565	0.3275	0.2403	0.38	0.1	0.3	0.32	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.427109	NA	NA	NA	NA	NA	0.319	NA	3.6083
1291	8	27291749	27291749	C	T	intronic	PTK2B	NA	NA	NA	intronic	ENSG00000120899	NA	NA	NA	NA	NA	8p21.2	NA	NA	NA	NA	rs12056620	0.31	0.31	0.285	0.336062	0.3917	0.1964	0.3862	0.3064	0.4274	0.41	0.16	0.36	0.29	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.046466	NA	NA	NA	NA	NA	0.442	NA	3.6083
1291	8	27293989	27293989	G	A	intronic	PTK2B	NA	NA	NA	intronic	ENSG00000120899	NA	NA	NA	NA	NA	8p21.2	NA	NA	NA	NA	rs2241654	0.37	0.37	0.379	0.421126	0.3917	0.1964	0.4078	0.6157	0.4294	0.41	0.15	0.38	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.141349	NA	NA	NA	NA	NA	0.507	NA	3.6083
1291	11	7670943	7670943	G	A	intronic	PPFIBP2	NA	NA	NA	intronic	ENSG00000166387	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs10839831	0.24	0.24	0.195	0.226637	0.3917	0.0873	0.3804	0.0166	0.3753	0.42	0.09	0.41	0.02	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.959883	NA	NA	NA	NA	NA	0.21	NA	3.6083
1291	19	13002563	13002563	T	G	intronic	GCDH	NA	NA	NA	intronic	ENSG00000105607	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs2242517	0.38	0.38	0.339	0.403954	0.3917	0.1508	0.4942	0.6377	0.2975	0.37	0.15	0.47	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.483847	NA	NA	NA	NA	NA	0.384	NA	3.6083
1291	19	39306803	39306803	G	C	intronic	ECH1	NA	NA	NA	intronic	ENSG00000104823	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs2075587	0.5	0.5	0.514	0.577077	0.3917	0.375	0.5591	0.882	0.5767	0.37	0.32	0.56	0.88	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.192197	NA	NA	NA	NA	NA	0.551	NA	3.6083
1291	20	3624704	3624704	G	A	intronic	ATRN	NA	NA	NA	intronic	ENSG00000088812	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs2246799	0.39	0.39	0.383	0.417732	0.3917	0.1964	0.3818	0.7133	0.2986	0.38	0.16	0.38	0.67	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.053356	NA	NA	NA	NA	NA	0.362	NA	3.6083
1291	20	31626558	31626558	G	C	intronic	BPIFB6	NA	NA	NA	intronic	ENSG00000167104	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs6088078	0.54	0.54	0.538	0.565695	0.3917	0.7411	0.4798	0.6195	0.5521	0.39	0.72	0.46	0.61	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.032282	NA	NA	NA	NA	NA	0.514	NA	3.6083
1291	20	31626621	31626621	C	T	intronic	BPIFB6	NA	NA	NA	intronic	ENSG00000167104	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs6057708	0.53	0.53	0.542	0.5627	0.3917	0.7252	0.4798	0.621	0.5511	0.39	0.71	0.45	0.61	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.067577	NA	NA	NA	NA	NA	0.514	NA	3.6083
1291	21	40900779	40900779	C	T	intergenic	SH3BGR,C21orf88	dist=13346;dist=68296	NA	NA	ncRNA_exonic	ENSG00000235012	NA	NA	NA	NA	NA	21q22.2	NA	NA	NA	NA	rs1007351	0.42	0.42	0.382	0.393171	0.3917	0.7341	0.5086	0.0356	0.4448	0.4	0.72	0.48	0.05	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.12569	NA	NA	NA	NA	NA	0.457	NA	3.6083
1291	12	996357	996357	C	T	intronic	WNK1	NA	NA	NA	intronic	ENSG00000060237	NA	NA	NA	NA	NA	12p13.33	NA	NA	NA	NA	rs56375346	0.1	0.1	0.107	0.101238	0.1332	0.1091	0.0778	0.0348	0.1667	0.13	0.11	0.1	0.04	0.1192	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.851524	NA	NA	0.139302	0.045847	NA	0.181	NA	3.608298
1291	1	21900151	21900151	T	C	intronic	ALPL	NA	NA	NA	intronic	ENSG00000162551	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs74063111	0.27	0.27	0.215	0.257987	0.1203	0.4484	0.2666	0.236	0.227	0.13	0.49	0.26	0.23	0.1721	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.485493	1.485493	NA	0.099419	0.191103	NA	0.167	NA	3.608181
1291	6	29718955	29718955	G	A	upstream	IFITM4P	NA	NA	NA	upstream;downstream	ENSG00000235821;ENSG00000199290,ENSG00000272236	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs55884048	0.06	0.06	0.039	0.076278	0.0586	0.1587	0.0375	0.0008	0.1391	0.06	0.14	0.03	0.002	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.137561	NA	NA	NA	NA	NA	0.087	NA	3.6080666
1291	10	90767640	90767640	C	T	intronic	FAS	NA	NA	NA	intronic	ENSG00000026103	NA	NA	NA	NA	NA	10q23.31	NA	NA	NA	NA	rs2296601	0.23	0.23	0.221	0.242013	0.1233	0.4286	0.2118	0.2247	0.2168	0.12	0.42	0.17	0.22	0.1637	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.685943	NA	NA	0.105116	0.218793	NA	0.152	NA	3.607884
1291	3	8667896	8667896	T	C	intronic	SSUH2	NA	NA	NA	intronic	ENSG00000125046	NA	NA	NA	NA	NA	3p26.1	NA	Name=Egr-1	Name=56	NA	rs355058	0.82	0.82	0.793	0.810903	0.8091	1	0.8228	0.6293	0.8548	0.81	1	0.8	0.64	0.8035	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.084873	NA	NA	0.779884	0.690195	NA	0.71	NA	3.607516
1291	4	5418539	5418539	C	T	intronic	STK32B	NA	NA	NA	intronic	ENSG00000152953	NA	NA	NA	NA	NA	4p16.2	NA	Name=MEF2A	Name=6	NA	rs168985	0.83	0.83	0.873	0.833466	0.7982	0.8988	0.6556	0.8865	0.8569	0.8	0.9	0.67	0.92	0.8041	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.090171	NA	NA	0.790233	0.85724	NA	0.906	NA	3.607467
1291	5	49929486	49929486	A	C	intergenic	EMB,PARP8	dist=192252;dist=32247	NA	NA	downstream	ENSG00000213956	NA	NA	NA	Score=488;Name=lod=128	NA	5q11.1	NA	NA	NA	NA	rs7710150	0.92	0.92	0.917	0.915335	0.8926	0.995	0.8761	0.9289	0.8661	0.89	0.99	0.89	0.91	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.265775	NA	NA	NA	NA	NA	0.522	NA	3.6074
1291	10	101823543	101823543	T	C	intronic	CPN1	NA	NA	NA	intronic	ENSG00000120054	NA	NA	NA	NA	NA	10q24.2	NA	NA	NA	NA	rs4462272	0.26	0.26	0.238	0.210663	0.3926	0.0823	0.3674	0.1558	0.1186	0.38	0.09	0.39	0.16	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.392563	NA	NA	NA	NA	NA	0.362	NA	3.6074
1291	14	78353368	78353368	T	C	intronic	ADCK1	NA	NA	NA	intronic	ENSG00000063761	NA	NA	NA	NA	NA	14q24.3	NA	NA	NA	NA	rs17826188	0.4	0.4	0.376	0.396166	0.3926	0.5099	0.5562	0.2057	0.4264	0.39	0.49	0.56	0.19	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.198838	NA	NA	NA	NA	NA	0.37	NA	3.6074
1291	15	93543956	93543956	G	A	intronic	CHD2	NA	NA	NA	intronic	ENSG00000173575	NA	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs12591124	0.48	0.48	0.434	0.460463	0.3926	0.8065	0.5014	0.1944	0.5041	0.4	0.79	0.5	0.21	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.023278	NA	NA	NA	NA	NA	0.37	NA	3.6074
1291	16	18860472	18860472	T	C	intronic	SMG1	NA	NA	NA	intronic	ENSG00000157106	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs12931729	0.23	0.23	0.215	0.242212	0.3926	0.1091	0.2983	0.1346	0.3303	0.39	0.09	0.28	0.13	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.899785	NA	NA	NA	NA	NA	0.348	NA	3.6074
1291	6	129932648	129932648	A	C	intronic	ARHGAP18	NA	NA	NA	intronic	ENSG00000146376	NA	NA	NA	NA	NA	6q22.33	NA	NA	NA	NA	rs34046462	0.07	0.07	0.058	0.0507188	0.1441	NA	0.1037	0.003	0.0337	0.14	NA	0.12	0.01	0.1032	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.110629	NA	NA	0.145814	0.027009	NA	0.072	NA	3.606886
1291	14	105617467	105617467	G	A	intronic	JAG2	NA	NA	NA	intronic	ENSG00000184916	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs116916276	0.07	0.07	0.086	0.0517173	0.1402	NA	0.0922	0.0106	0.0409	0.14	NA	0.1	0.01	0.1244	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.556313	1.556313	NA	0.128581	0.032787	NA	0.022	NA	3.606819
1291	19	54206144	54206144	A	G	downstream	MIR518B	NA	NA	NA	downstream	ENSG00000207862	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs115619728	0.03	0.03	0.026	0.0269569	0.0288	0.0506	0.0072	0.0151	0.0307	0.03	0.04	0.01	0.02	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.538221	NA	NA	0.031113	0.011561	NA	0.007	NA	3.6067536
1291	1	175096333	175096333	A	G	intronic	TNN	NA	NA	NA	intronic	ENSG00000120332	NA	NA	NA	NA	NA	1q25.1	NA	NA	NA	NA	rs2072040	0.5	0.5	0.484	0.490216	0.3936	0.6468	0.5576	0.3638	0.5511	0.4	0.67	0.55	0.41	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.010832	NA	NA	NA	NA	NA	0.565	NA	3.6064
1291	5	5200490	5200490	T	C	intronic	ADAMTS16	NA	NA	NA	intronic	ENSG00000145536	NA	NA	NA	NA	NA	5p15.32	NA	NA	NA	NA	rs17762877	0.22	0.22	0.213	0.22524	0.3936	0.0694	0.2349	0.112	0.3589	0.37	0.08	0.25	0.14	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.211553	NA	NA	NA	NA	NA	0.225	NA	3.6064
1291	9	38413159	38413159	T	G	intronic	IGFBPL1	NA	NA	NA	intronic	ENSG00000137142	NA	NA	NA	NA	NA	9p13.1	NA	NA	NA	NA	rs7018644	0.3	0.3	0.282	0.307708	0.3936	0.1935	0.304	0.3041	0.3446	0.39	0.22	0.33	0.27	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.692686	NA	NA	NA	NA	ID=COSN168544;OCCURENCE=1(large_intestine)	0.254	NA	3.6064
1291	11	118970878	118970878	A	C	intronic	DPAGT1	NA	NA	NA	intronic	ENSG00000172269	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs603826	0.34	0.34	0.337	0.282548	0.3936	0.4544	0.2378	0.174	0.1697	0.38	0.49	0.28	0.15	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.025403	NA	NA	NA	NA	NA	0.406	NA	3.6064
1291	11	118985151	118985151	T	C	intronic	C2CD2L	NA	NA	NA	intronic	ENSG00000172375	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs595782	0.35	0.35	0.36	0.295927	0.3936	0.4841	0.2478	0.1906	0.1779	0.38	0.5	0.28	0.16	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.193813	NA	NA	NA	NA	NA	0.413	NA	3.6064
1291	15	91435422	91435422	G	A	intronic	FES	NA	NA	NA	intronic	ENSG00000182511	NA	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs12909124	0.46	0.46	0.423	0.457069	0.3936	0.7887	0.5893	0.1157	0.5481	0.37	0.81	0.54	0.12	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.079411	NA	NA	NA	NA	NA	0.37	NA	3.6064
1291	19	2116760	2116760	A	G	intronic	AP3D1	NA	NA	NA	intronic	ENSG00000065000	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs78648742	0.07	0.07	0.066	0.0800719	0.1153	NA	0.0677	0.0855	0.1278	0.11	NA	0.09	0.09	0.1322	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.069218	NA	NA	0.146203	0.08487	NA	0.065	NA	3.606297
1291	13	113459221	113459221	A	G	intronic	ATP11A	NA	NA	NA	intronic	ENSG00000068650	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs3742228	0.22	0.22	0.243	0.23143	0.1451	0.2044	0.1282	0.4213	0.1646	0.14	0.19	0.14	0.43	0.141	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.172752	NA	NA	0.107734	0.359091	NA	0.217	NA	3.606166
1291	8	101117734	101117734	A	G	intronic	RGS22	NA	NA	NA	UTR5	ENSG00000132554	ENST00000523287:c.-25322T>C,ENST00000519092:c.-25322T>C	NA	NA	NA	NA	8q22.2	NA	NA	NA	NA	rs1471293	0.7	0.7	0.703	0.696286	0.5606	0.7044	0.7262	0.8759	0.5634	0.57	0.71	0.72	0.86	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.454732	NA	NA	NA	NA	NA	0.638	NA	3.6060667
1291	19	9489132	9489132	C	T	intronic	ZNF177,ZNF559-ZNF177	NA	NA	NA	UTR3	ENSG00000270011	ENST00000605775:c.*280C>T	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs2304110	0.53	0.53	0.544	0.54353	0.5606	0.4504	0.5375	0.5885	0.5654	0.55	0.42	0.57	0.59	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.78729	NA	NA	NA	NA	NA	0.638	NA	3.6060667
1291	14	24522911	24522911	C	G	intronic	LRRC16B	NA	NA	NA	intronic	ENSG00000186648	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs35809913	0.07	0.07	0.053	0.0734824	0.1322	0.0089	0.0937	0.0076	0.1544	0.14	0.01	0.1	0.01	0.1132	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.52932	NA	NA	0.148721	0.026101	NA	0.08	NA	3.605879
1291	4	2935251	2935251	T	A	intronic	MFSD10	NA	NA	NA	intronic	ENSG00000109736	NA	NA	NA	NA	NA	4p16.3	NA	Name=EBF1_(C-8)	Name=15	NA	rs2301374	0.72	0.72	0.717	0.746605	0.7982	0.5675	0.8084	0.7738	0.7975	0.79	0.52	0.8	0.77	0.7868	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.160892	NA	NA	0.809186	0.771902	NA	0.63	NA	3.605814
1291	19	2121316	2121316	C	T	intronic	AP3D1	NA	NA	NA	intronic	ENSG00000065000	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs11667435	0.05	0.05	0.04	0.0609026	0.1153	NA	0.062	0.0151	0.1288	0.11	NA	0.07	0.01	0.1227	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.387393	NA	NA	0.156294	0.036446	NA	0.058	NA	3.605706
1291	3	195959924	195959924	T	C	intronic	SLC51A	NA	NA	NA	intronic	ENSG00000161217,ENSG00000163959	NA	NA	NA	NA	NA	3q29	NA	Name=BATF	NA	NA	rs1476331	0.59	0.59	0.59	0.573882	0.4423	0.8681	0.5101	0.4909	0.5634	0.44	0.88	0.51	0.53	0.507	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.112037	NA	NA	0.445116	0.491602	NA	0.507	NA	3.605584
1291	1	161721351	161721351	A	G	intronic	DUSP12	NA	NA	NA	intronic	ENSG00000081721	NA	NA	NA	NA	NA	1q23.3	NA	NA	NA	NA	rs7540096	0.57	0.57	0.587	0.58147	0.3946	0.7034	0.3429	0.9009	0.3855	0.39	0.67	0.4	0.89	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.158468	NA	NA	NA	NA	NA	0.536	NA	3.6054
1291	3	56052839	56052839	G	T	intronic	ERC2	NA	NA	NA	intronic	ENSG00000187672	NA	NA	NA	NA	NA	3p14.3	NA	NA	NA	NA	rs3816575	0.37	0.37	0.341	0.33766	0.3946	0.5129	0.317	0.1346	0.3875	0.4	0.53	0.38	0.13	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.440751	1.440751	NA	NA	NA	NA	0.174	NA	3.6054
1291	12	52946346	52946346	C	G	intronic	KRT71	NA	NA	NA	intronic	ENSG00000139648	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs681387	0.36	0.36	0.397	0.405751	0.3946	0.1865	0.2291	0.6392	0.453	0.4	0.19	0.25	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.677234	NA	NA	NA	NA	ID=COSN164263;OCCURENCE=1(breast)	0.406	NA	3.6054
1291	14	107099480	107099480	C	T	intergenic	LINC00221,NONE	dist=147951;dist=NONE	NA	NA	ncRNA_intronic	ENSG00000253132	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs113778466	NA	NA	0.301	0.567692	0.3946	0.5298	0.4452	0.6974	0.6963	NA	NA	NA	NA	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.015463	NA	NA	NA	NA	NA	0.239	NA	3.6054
1291	15	59494673	59494673	C	T	intronic	MYO1E	NA	NA	NA	intronic	ENSG00000157483	NA	NA	NA	NA	NA	15q22.2	NA	NA	NA	NA	rs2306787	0.51	0.51	0.48	0.557708	0.3946	0.6825	0.5274	0.5356	0.6483	0.4	0.68	0.47	0.51	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.196365	NA	NA	NA	NA	NA	0.428	NA	3.6054
1291	10	27404927	27404927	G	T	intronic	YME1L1	NA	NA	NA	intronic	ENSG00000136758	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs2297151	0.34	0.34	0.336	0.347244	0.2247	0.5506	0.1873	0.3071	0.4315	0.23	0.6	0.19	0.3	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.312645	NA	NA	0.170246	0.313584	NA	0.275	NA	3.605054
1292	7	56126360	56126360	T	C	exonic	CCT6A	NA	synonymous SNV	CCT6A:NM_001009186:exon7:c.T798C:p.V266V,CCT6A:NM_001762:exon8:c.T933C:p.V311V	exonic	ENSG00000146731	NA	synonymous SNV	ENSG00000146731:ENST00000335503:exon7:c.T798C:p.V266V,ENSG00000146731:ENST00000275603:exon8:c.T933C:p.V311V,ENSG00000146731:ENST00000540286:exon9:c.T840C:p.V280V	NA	NA	7p11.2	NA	NA	NA	NA	rs2230197	0.67	0.67	0.672	0.642173	0.6789	0.7103	0.6614	0.5961	0.5828	0.69	0.71	0.65	0.62	0.6838	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.668484	NA	NA	0.69907	0.603268	NA	0.681	NA	3.6048966
1292	7	101192542	101192542	G	A	intronic	COL26A1	NA	NA	NA	intronic	ENSG00000160963	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs57977430	0.11	0.11	0.125	0.121605	0.1402	0.0069	0.0879	0.174	0.1738	0.14	0.01	0.09	0.17	0.1252	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.03761	NA	NA	0.129828	0.170032	NA	0.225	NA	3.604772
1292	18	8796503	8796503	C	T	intronic	SOGA2	NA	NA	NA	intronic	ENSG00000168502	NA	NA	NA	NA	NA	18p11.22	NA	NA	NA	NA	rs2287501	0.08	0.08	0.064	0.0720847	0.1402	0.0228	0.0893	0.0484	0.0726	0.14	0.02	0.09	0.04	0.1145	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.008208	3.008208	NA	0.140814	0.050386	NA	0.203	NA	3.604486
1292	12	133365914	133365914	C	T	intronic	GOLGA3	NA	NA	NA	intronic	ENSG00000090615	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs77794360	0.1	0.1	0.08	0.101438	0.1461	0.1151	0.1009	0.0083	0.1677	0.15	0.1	0.11	0.01	0.1344	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.543701	NA	NA	0.115093	0.026744	NA	0.043	NA	3.604407
1292	2	36805676	36805676	A	G	intronic	FEZ2	NA	NA	NA	intronic	ENSG00000171055	NA	NA	NA	NA	NA	2p22.2	NA	NA	NA	NA	rs2075226	0.49	0.49	0.511	0.490016	0.3956	0.6468	0.3386	0.6437	0.3252	0.4	0.62	0.32	0.61	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.397788	NA	NA	NA	NA	NA	0.565	NA	3.6044
1292	9	136232758	136232758	T	C	intronic	SURF4	NA	NA	NA	intronic	ENSG00000148248	NA	NA	NA	NA	NA	9q34.2	NA	NA	NA	NA	rs2269894	0.28	0.28	0.245	0.291134	0.3956	0.2976	0.3573	0.0393	0.4703	0.41	0.27	0.35	0.07	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.833141	NA	NA	NA	NA	NA	0.232	NA	3.6044
1292	11	101637206	101637206	T	C	intergenic	TRPC6,ANGPTL5	dist=182547;dist=124199	NA	NA	ncRNA_exonic	ENSG00000254534	NA	NA	NA	NA	NA	11q22.1	NA	NA	NA	NA	rs734953	0.38	0.38	0.35	0.388379	0.3956	0.3552	0.3256	0.4183	0.4192	0.4	0.34	0.33	0.42	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.540172	NA	NA	NA	NA	NA	0.29	NA	3.6044
1292	11	110118364	110118364	A	C	intronic	RDX	NA	NA	NA	intronic	ENSG00000137710	NA	NA	NA	NA	NA	11q22.3	NA	NA	NA	NA	rs17110988	0.43	0.43	0.39	0.42512	0.3956	0.6419	0.4179	0.3026	0.4029	0.42	0.6	0.41	0.27	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.568271	NA	NA	NA	NA	NA	0.348	NA	3.6044
1292	14	90734826	90734826	A	G	intronic	PSMC1	NA	NA	NA	intronic	ENSG00000100764	NA	NA	NA	NA	NA	14q32.11	NA	NA	NA	NA	rs11624246	0.35	0.35	0.327	0.323482	0.3956	0.5099	0.3012	0.0825	0.3988	0.41	0.51	0.33	0.1	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.459647	NA	NA	NA	NA	NA	0.312	NA	3.6044
1292	14	107099262	107099262	T	C	intergenic	LINC00221,NONE	dist=147733;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000253132	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs72483334	0.43	0.43	0.297	0.549521	0.3956	0.5119	0.4236	0.6732	0.6687	0.33	0.43	0.4	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.386182	NA	NA	NA	NA	NA	0.036	NA	3.6044
1292	17	76502734	76502734	T	C	intronic	DNAH17	NA	NA	NA	intronic	ENSG00000187775	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs11077378	0.32	0.32	0.367	0.357428	0.3956	0.1042	0.2853	0.4849	0.4581	0.4	0.1	0.31	0.46	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.098756	NA	NA	NA	NA	NA	0.464	NA	3.6044
1292	22	50658570	50658570	A	G	intronic	TUBGCP6	NA	NA	NA	intronic	ENSG00000128159	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs17248273	0.4	0.4	0.377	0.408147	0.3956	0.3929	0.4121	0.4614	0.362	0.39	0.38	0.37	0.48	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.108059	NA	NA	NA	NA	NA	0.37	NA	3.6044
1292	2	241812566	241812566	G	A	intronic	AGXT	NA	NA	NA	intronic	ENSG00000172482	NA	NA	NA	NA	NA	2q37.3	NA	NA	NA	NA	rs12997245	0.31	0.31	0.322	0.304313	0.3966	0.2431	0.2464	0.3351	0.272	0.39	0.22	0.28	0.32	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.112629	NA	NA	NA	NA	NA	0.486	NA	3.6034
1292	3	45715767	45715767	G	A	intronic	LIMD1	NA	NA	NA	intronic	ENSG00000144791	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs2742409	0.21	0.21	0.183	0.182109	0.3966	0.0298	0.3242	0.0484	0.1984	0.38	0.02	0.33	0.07	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.318186	NA	NA	NA	NA	NA	0.116	NA	3.6034
1292	3	47361082	47361082	G	T	intronic	KLHL18	NA	NA	NA	intronic	ENSG00000114648	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs2302278	NA	NA	NA	0.461062	0.3966	0.4435	0.4553	0.5779	0.3916	NA	NA	NA	NA	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.662607	NA	NA	NA	NA	NA	0.362	NA	3.6034
1292	4	85165279	85165279	G	C	intergenic	AGPAT9,NKX6-1	dist=638252;dist=249157	NA	NA	ncRNA_exonic	ENSG00000214980	NA	NA	NA	NA	NA	4q21.23	NA	NA	NA	NA	rs348702	0.29	0.29	0.267	0.25619	0.3966	0.1577	0.2925	0.2814	0.1534	0.42	0.14	0.28	0.26	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.179912	NA	NA	NA	NA	NA	0.384	NA	3.6034
1292	5	137728774	137728774	A	G	intronic	KDM3B	NA	NA	NA	intronic	ENSG00000120733	NA	NA	NA	NA	NA	5q31.2	NA	NA	NA	NA	rs2269951	0.44	0.44	0.444	0.457268	0.3966	0.5833	0.3415	0.4607	0.4673	0.4	0.56	0.31	0.45	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.376518	1.376518	NA	NA	NA	NA	0.5	NA	3.6034
1292	8	61496950	61496950	C	T	intronic	RAB2A	NA	NA	NA	intronic	ENSG00000104388	NA	NA	NA	NA	NA	8q12.1	NA	NA	NA	NA	rs3735826	0.56	0.56	0.594	0.616813	0.3966	0.5913	0.4251	0.8986	0.6247	0.38	0.56	0.47	0.9	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.790758	NA	NA	NA	NA	NA	0.601	NA	3.6034
1292	10	44874253	44874253	C	T	intronic	CXCL12	NA	NA	NA	intronic	ENSG00000107562,ENSG00000269515	NA	NA	NA	NA	NA	10q11.21	NA	NA	NA	NA	rs266085	0.4	0.4	0.373	0.373802	0.3966	0.5546	0.3242	0.202	0.4315	0.42	0.56	0.34	0.24	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.330369	NA	NA	NA	NA	NA	0.362	NA	3.6034
1292	11	3048140	3048140	A	G	intronic	CARS	NA	NA	NA	intronic	ENSG00000110619	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs494427	0.42	0.42	0.428	0.456869	0.3966	0.2024	0.3545	0.7791	0.4182	0.4	0.21	0.35	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.262038	NA	NA	NA	NA	NA	0.449	NA	3.6034
1292	11	6636900	6636900	G	C	intronic	TPP1	NA	NA	NA	intronic	ENSG00000166340	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs1800745	0.14	0.14	0.131	0.113419	0.2117	0.0863	0.1801	0.0113	0.1309	0.22	0.1	0.19	0.02	0.1849	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.812817	NA	NA	NA	NA	NA	0.152	NA	3.6034
1292	14	21215600	21215600	A	G	intronic	EDDM3A	NA	NA	NA	intronic	ENSG00000181562	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs17211691	0.37	0.37	0.366	0.348842	0.3966	0.374	0.4179	0.289	0.3057	0.41	0.38	0.37	0.28	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.025523	NA	NA	NA	NA	NA	0.355	NA	3.6034
1292	17	38877872	38877872	C	A	intergenic	KRT24,KRT25	dist=17870;dist=26401	NA	NA	ncRNA_exonic	ENSG00000229028	NA	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs1526602	0.38	0.38	0.362	0.363019	0.3966	0.2808	0.4135	0.3828	0.3507	0.39	0.3	0.44	0.4	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.89465	NA	NA	NA	NA	NA	0.442	NA	3.6034
1292	7	27578068	27578068	T	C	intronic	HIBADH	NA	NA	NA	intronic	ENSG00000106049	NA	NA	NA	NA	NA	7p15.2	NA	NA	NA	NA	rs17607303	0.08	0.08	0.056	0.0585064	0.1481	0.001	0.0793	0.0499	0.0225	0.15	NA	0.1	0.05	0.1045	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.91468	2.91468	NA	0.144336	0.06653	NA	0.116	NA	3.603064
1292	10	98336341	98336341	C	A	intronic	TM9SF3	NA	NA	NA	intronic	ENSG00000077147	NA	NA	NA	NA	NA	10q24.1	NA	NA	NA	NA	rs61858555	0.08	0.08	0.081	0.0786741	0.1342	0.0149	0.0749	0.059	0.1166	0.14	0.01	0.09	0.07	0.1124	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.049703	NA	NA	0.1505	0.065365	NA	0.043	NA	3.6029
1292	12	118639312	118639312	G	A	intronic	TAOK3	NA	NA	NA	intronic	ENSG00000135090	NA	NA	NA	NA	NA	12q24.23	NA	NA	NA	NA	rs17440433	0.07	0.07	0.072	0.0559105	0.1511	0.0089	0.062	0.0204	0.0501	0.16	0.01	0.06	0.02	0.1061	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.960505	NA	NA	0.14	0.036314	NA	0.058	NA	3.6028
1292	4	149073555	149073555	C	T	intronic	NR3C2	NA	NA	NA	ncRNA_intronic	ENSG00000250354	NA	NA	NA	NA	NA	4q31.23	NA	NA	NA	NA	rs2272089	0.76	0.76	0.777	0.731629	0.7306	0.7649	0.6729	0.7852	0.6677	0.74	0.79	0.69	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.271378	NA	NA	NA	NA	NA	0.761	NA	3.6027333
1292	6	56371698	56371698	A	G	ncRNA_intronic	RNU6-71P	NA	NA	NA	intronic	ENSG00000151914	NA	NA	NA	NA	NA	6p12.1	NA	NA	NA	NA	rs9296848	0.78	0.78	0.768	0.763778	0.7306	0.7589	0.7392	0.879	0.6646	0.74	0.77	0.71	0.88	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.606858	NA	NA	NA	NA	NA	0.768	NA	3.6027333
1292	18	31599259	31599259	T	C	intronic	NOL4	NA	NA	NA	intronic	ENSG00000101746	NA	NA	NA	NA	NA	18q12.1	NA	NA	NA	NA	rs10502615	0.08	0.08	0.064	0.0597045	0.1421	0.001	0.0965	0.0272	0.0532	0.15	0.0017	0.13	0.03	0.1065	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.014277	2.014277	NA	0.148721	0.041761	NA	0.043	NA	3.602679
1292	10	100021983	100021983	G	A	intronic	LOXL4	NA	NA	NA	intronic	ENSG00000138131	NA	NA	NA	NA	NA	10q24.2	NA	NA	NA	NA	rs746257	0.1	0.1	0.102	0.0994409	0.1322	0.1052	0.0879	0.0658	0.1135	0.13	0.1	0.1	0.05	0.1199	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.432277	NA	NA	0.145233	0.08443	NA	0.145	NA	3.602667
1292	17	57746107	57746107	A	G	intronic	CLTC	NA	NA	NA	intronic	ENSG00000141367	NA	NA	NA	NA	NA	17q23.1	NA	NA	NA	NA	rs2272411	0.28	0.28	0.306	0.30611	0.1004	0.4792	0.1585	0.3585	0.3732	0.1	0.49	0.17	0.37	0.2035	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.157562	NA	NA	0.093605	0.302135	NA	0.283	NA	3.602495
1292	1	94341137	94341137	C	T	intronic	DNTTIP2	NA	NA	NA	intronic	ENSG00000067334	NA	NA	NA	NA	NA	1p22.1	NA	NA	NA	NA	rs2273166	0.42	0.42	0.416	0.446486	0.3976	0.619	0.3934	0.2579	0.6115	0.39	0.61	0.42	0.26	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.380061	NA	NA	NA	NA	NA	0.486	NA	3.6024
1292	2	71376809	71376809	T	C	intronic	MPHOSPH10	NA	NA	NA	intronic	ENSG00000124383	NA	NA	NA	NA	NA	2p13.3	NA	NA	NA	NA	rs4852763	0.21	0.21	0.175	0.182907	0.3976	0.0437	0.2723	0.0318	0.2464	0.4	0.04	0.3	0.03	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.457794	NA	NA	NA	NA	NA	0.232	NA	3.6024
1292	6	549364	549364	G	A	intronic	EXOC2	NA	NA	NA	intronic	ENSG00000112685	NA	NA	NA	NA	NA	6p25.3	NA	NA	NA	NA	rs2473490	0.35	0.35	0.391	0.353634	0.3976	0.1627	0.268	0.6097	0.2198	0.42	0.16	0.28	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.198398	NA	NA	NA	NA	NA	0.304	NA	3.6024
1292	19	58757870	58757870	G	C	intronic	ZNF544	NA	NA	NA	intronic	ENSG00000198131,ENSG00000269545	NA	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs12972443	0.24	0.24	0.254	0.206669	0.3976	0.0129	0.2421	0.1853	0.2137	0.4	0.01	0.3	0.22	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.979377	NA	NA	NA	NA	NA	0.254	NA	3.6024
1292	19	2109071	2109071	C	T	intronic	AP3D1	NA	NA	NA	intronic	ENSG00000065000	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs56150334	0.07	0.07	0.055	0.0770767	0.1153	NA	0.0677	0.0749	0.1268	0.11	NA	0.09	0.08	0.1267	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.063972	NA	NA	0.155609	0.0837	NA	0.065	NA	3.602391
1292	3	194373833	194373833	G	A	exonic	LSG1	NA	synonymous SNV	LSG1:NM_018385:exon8:c.C798T:p.T266T	exonic	ENSG00000041802	NA	synonymous SNV	ENSG00000041802:ENST00000265245:exon8:c.C798T:p.T266T	NA	NA	3q29	NA	NA	NA	NA	rs1705991	0.56	0.56	0.614	0.634185	0.7038	0.8651	0.6297	0.3253	0.7454	0.6	0.75	0.56	0.26	0.6765	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.006305	NA	NA	0.68407	0.400136	NA	NA	NA	3.6022966
1292	11	16863049	16863049	C	T	intronic	PLEKHA7	NA	NA	NA	intronic	ENSG00000166689	NA	NA	NA	NA	NA	11p15.1	NA	NA	NA	NA	rs369457	0.18	0.18	0.188	0.194688	0.1352	0.1617	0.2032	0.3079	0.1309	0.12	0.17	0.19	0.26	0.143	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.011669	NA	NA	0.119585	0.265227	NA	0.232	NA	3.602215
1292	6	25798932	25798932	G	A	intronic	SLC17A1	NA	NA	NA	UTR3	ENSG00000124568	ENST00000476801:c.*81C>T	NA	NA	NA	NA	6p22.2	NA	NA	NA	NA	rs1165215	0.74	0.74	0.729	0.719848	0.5646	0.8175	0.7017	0.9228	0.5174	0.57	0.84	0.69	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.179594	NA	NA	NA	NA	NA	0.623	NA	3.6020667
1292	6	160133633	160133633	G	C	intergenic	SOD2,WTAP	dist=19280;dist=14397	NA	NA	intronic	ENSG00000112096	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs76993980	0.08	0.08	0.054	0.057508	0.0646	0.0347	0.1643	0.0386	0.0235	0.07	0.04	0.14	0.07	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.060896	NA	NA	NA	NA	NA	0.007	NA	3.6020667
1292	9	117027165	117027165	A	G	intronic	COL27A1	NA	NA	NA	intronic	ENSG00000196739	NA	NA	NA	NA	NA	9q32	NA	NA	NA	NA	rs41312228	0.08	0.08	0.055	0.0617013	0.1431	0.002	0.1441	0.0151	0.044	0.14	0.0035	0.15	0.01	0.1124	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.622598	1.622598	NA	0.142442	0.035876	NA	0.08	NA	3.602058
1292	1	227333141	227333141	T	C	intronic	CDC42BPA	NA	NA	NA	intronic	ENSG00000143776	NA	NA	NA	NA	NA	1q42.13	NA	NA	NA	NA	rs60079575	0.13	0.13	0.129	0.1248	0.1362	NA	0.0908	0.2905	0.0419	0.13	NA	0.1	0.28	0.1172	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.596953	NA	NA	0.144752	0.246591	NA	0.138	NA	3.601848
1292	19	18989859	18989859	G	A	intronic	CERS1,GDF1	NA	NA	NA	intronic	ENSG00000130283,ENSG00000223802	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs2075762	0.15	0.15	0.152	0.170327	0.1143	0.379	0.0951	0.0053	0.2894	0.12	0.37	0.08	0.0041	0.1568	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.944596	NA	NA	0.127061	0.024755	NA	0.196	NA	3.601839
1292	19	33663354	33663354	T	C	intronic	WDR88	NA	NA	NA	intronic	ENSG00000166359	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs62125333	0.15	0.15	0.153	0.186102	0.1292	0.1607	0.134	0.1467	0.3609	0.13	0.17	0.17	0.14	0.1529	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.043201	NA	NA	0.116163	0.141171	NA	0.203	NA	3.601737
1292	22	21330608	21330608	C	T	intronic	AIFM3	NA	NA	NA	intronic	ENSG00000183773	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs34766252	0.1	0.1	0.089	0.0840655	0.1461	NA	0.0648	0.146	0.0368	0.16	NA	0.07	0.16	0.1159	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.798513	NA	NA	0.136279	0.151158	NA	0.087	NA	3.601721
1292	19	2123328	2123328	A	G	intronic	AP3D1	NA	NA	NA	intronic	ENSG00000065000	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs76578931	0.07	0.07	0.061	0.076877	0.1143	NA	0.0648	0.0749	0.1288	0.11	NA	0.08	0.08	0.1271	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.090136	NA	NA	0.156912	0.084103	NA	0.065	NA	3.601688
1292	2	98382886	98382886	G	A	intronic	TMEM131	NA	NA	NA	intronic	ENSG00000075568	NA	NA	NA	NA	NA	2q11.2	NA	NA	NA	NA	rs895438	0.19	0.19	0.147	0.140375	0.3986	0.0119	0.2017	0.0234	0.1217	0.42	0.01	0.21	0.02	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.887162	NA	NA	NA	NA	NA	0.152	NA	3.6014
1292	4	5642141	5642141	C	T	intronic	EVC2	NA	NA	NA	intronic	ENSG00000173040	NA	NA	NA	NA	NA	4p16.2	NA	NA	NA	NA	rs751842	0.4	0.4	0.4	0.400759	0.3986	0.3512	0.464	0.4531	0.3384	0.41	0.38	0.43	0.4	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.369251	NA	NA	NA	NA	NA	0.435	NA	3.6014
1292	5	178268107	178268107	G	C	intergenic	AACSP1,ZNF354B	dist=64830;dist=18847	NA	NA	ncRNA_exonic	ENSG00000253725	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs7445060	0.35	0.35	0.334	0.34365	0.3986	0.4067	0.3141	0.2421	0.3804	0.38	0.38	0.36	0.24	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.008239	NA	NA	NA	NA	NA	0.203	NA	3.6014
1292	10	30974174	30974174	T	C	intergenic	LYZL2,ZNF438	dist=55527;dist=159391	NA	NA	ncRNA_intronic	ENSG00000234814	NA	NA	NA	NA	NA	10p11.23	NA	NA	NA	NA	rs4749580	0.32	0.32	0.274	0.347843	0.3986	0.2698	0.4135	0.2269	0.4928	0.4	0.25	0.4	0.25	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.134361	NA	NA	NA	NA	NA	0.29	NA	3.6014
1292	10	97158713	97158713	G	A	intronic	SORBS1	NA	NA	NA	intronic	ENSG00000095637	NA	NA	NA	NA	NA	10q24.1	NA	NA	NA	NA	rs2274489	0.25	0.25	0.251	0.256589	0.3986	0.0823	0.3386	0.1339	0.3978	0.39	0.1	0.35	0.14	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.000196	2.000196	NA	NA	NA	ID=COSN163718;OCCURENCE=1(breast)	0.159	NA	3.6014
1292	17	60214389	60214389	G	A	intergenic	MED13,TBC1D3P2	dist=71746;dist=127678	NA	NA	ncRNA_exonic	ENSG00000266066	NA	NA	NA	NA	NA	17q23.2	NA	NA	NA	NA	rs72844475	0.32	0.32	0.278	0.305711	0.3986	0.1359	0.5144	0.289	0.2597	0.42	0.14	0.48	0.27	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.606215	NA	NA	NA	NA	NA	0.333	NA	3.6014
1292	19	14743902	14743902	C	T	intronic	EMR3	NA	NA	NA	intronic	ENSG00000131355	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs2045912	0.46	0.46	0.437	0.509784	0.3986	0.631	0.4769	0.4153	0.6503	0.38	0.63	0.44	0.39	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.424931	NA	NA	NA	NA	NA	0.449	NA	3.6014
1292	19	18956699	18956699	G	A	intronic	UPF1	NA	NA	NA	intronic	ENSG00000005007	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs59045002	0.28	0.28	0.246	0.241414	0.3986	0.1687	0.4971	0.0658	0.2106	0.38	0.18	0.5	0.09	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.863159	NA	NA	NA	NA	NA	0.217	NA	3.6014
1292	12	133358870	133358870	G	A	intronic	GOLGA3	NA	NA	NA	intronic	ENSG00000090615	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs2306546	0.1	0.1	0.071	0.101238	0.1461	0.1131	0.1009	0.0098	0.1667	0.15	0.1	0.11	0.01	0.1284	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.354632	NA	NA	0.124302	0.028824	ID=COSN164419;OCCURENCE=1(NS)	0.043	NA	3.601198
1292	7	100002772	100002772	A	G	intronic	ZCWPW1	NA	NA	NA	intronic	ENSG00000078487	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs76913697	0.11	0.11	0.107	0.11242	0.1928	0.0278	0.1153	0.1157	0.1104	0.19	0.02	0.12	0.1	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.786221	NA	NA	0.20616	0.131503	NA	0.159	NA	3.60104
1292	19	2109988	2109988	A	T	intronic	AP3D1	NA	NA	NA	intronic	ENSG00000065000	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs77265501	0.07	0.07	0.057	0.0770767	0.1153	NA	0.0677	0.0749	0.1268	0.11	NA	0.09	0.08	0.1273	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.091888	NA	NA	0.156867	0.086473	NA	0.065	NA	3.600533
1292	2	10059097	10059097	A	C	intronic	TAF1B	NA	NA	NA	intronic	ENSG00000115750	NA	NA	NA	NA	NA	2p25.1	NA	NA	NA	NA	rs2303921	0.49	0.49	0.494	0.502196	0.3996	0.5476	0.4813	0.5688	0.4857	0.42	0.52	0.44	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.228397	NA	NA	NA	NA	NA	0.384	NA	3.6004
1292	17	3019790	3019790	A	G	intergenic	OR1D2,OR1G1	dist=23500;dist=10114	NA	NA	ncRNA_exonic	ENSG00000142163	NA	NA	NA	NA	NA	17p13.3	NA	NA	NA	NA	rs769433	0.24	0.24	0.224	0.232228	0.3996	0.1022	0.1902	0.2224	0.2372	0.39	0.1	0.22	0.18	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.320917	NA	NA	NA	NA	NA	0.326	NA	3.6004
1292	6	151198895	151198895	T	C	intronic	MTHFD1L	NA	NA	NA	intronic	ENSG00000120254	NA	NA	NA	NA	NA	6q25.1	NA	NA	NA	NA	rs2073064	0.21	0.21	0.191	0.20627	0.1093	0.2113	0.2695	0.3434	0.0706	0.11	0.22	0.25	0.34	0.1652	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.968524	3.968524	NA	0.125349	0.309124	NA	0.203	NA	3.600151
1292	17	15930087	15930087	G	A	intronic	TTC19	NA	NA	NA	UTR3	ENSG00000011295	ENST00000578103:c.*63G>A	NA	NA	NA	NA	17p12	NA	NA	NA	NA	rs35168566	0.49	0.49	0.479	0.492412	0.5666	0.2242	0.5173	0.6853	0.4141	0.57	0.2	0.52	0.66	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.527983	NA	NA	NA	NA	NA	0.522	NA	3.6000667
1292	19	55713411	55713411	G	A	intronic	PTPRH	NA	NA	NA	intronic	ENSG00000080031	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs144253410	0.13	0.13	0.14	0.124401	0.1412	0.1667	0.0591	0.0885	0.1585	0.14	0.18	0.07	0.1	0.1315	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.585533	NA	NA	0.127326	0.094871	NA	0.152	NA	3.599974
1292	10	53893539	53893539	A	T	intronic	PRKG1	NA	NA	NA	intronic	ENSG00000185532	NA	NA	NA	NA	NA	10q21.1	NA	NA	NA	NA	rs17642863	0.1	0.1	0.093	0.127995	0.1789	0.0129	0.1369	0.0613	0.2781	0.18	0.01	0.14	0.07	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.556174	2.556174	NA	0.221245	0.083092	NA	0.094	NA	3.599855
1292	5	179147641	179147641	C	T	intronic	CANX	NA	NA	NA	intronic	ENSG00000127022	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs59666900	0.36	0.36	0.324	0.380391	0.4006	0.4524	0.4135	0.1377	0.59	0.42	0.43	0.41	0.16	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.199297	NA	NA	NA	NA	NA	0.326	NA	3.5994
1292	8	42026393	42026393	T	C	intronic	AP3M2	NA	NA	NA	intronic	ENSG00000070718	NA	NA	NA	NA	NA	8p11.21	NA	NA	NA	NA	rs7016041	0.47	0.47	0.463	0.465256	0.4006	0.4583	0.4236	0.6483	0.3211	0.39	0.44	0.45	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.846573	NA	NA	NA	NA	NA	0.5	NA	3.5994
1292	10	98240045	98240045	C	T	intronic	TLL2	NA	NA	NA	intronic	ENSG00000095587	NA	NA	NA	NA	NA	10q24.1	NA	NA	NA	NA	rs2281800	0.3	0.3	0.287	0.256589	0.4006	0.1071	0.3963	0.2587	0.1605	0.39	0.12	0.38	0.3	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.008335	NA	NA	NA	NA	NA	0.297	NA	3.5994
1292	17	11543520	11543520	T	C	intronic	DNAH9	NA	NA	NA	intronic	ENSG00000007174	NA	NA	NA	NA	NA	17p12	NA	NA	NA	NA	rs11653848	0.32	0.32	0.303	0.32508	0.4006	0.244	0.2795	0.3585	0.318	0.38	0.2	0.32	0.37	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.112346	NA	NA	NA	NA	NA	0.275	NA	3.5994
1292	22	50658274	50658274	C	G	intronic	TUBGCP6	NA	NA	NA	intronic	ENSG00000128159	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs2272854	0.39	0.39	0.365	0.393371	0.4006	0.3948	0.4006	0.4054	0.363	0.39	0.38	0.36	0.4	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.300868	NA	NA	NA	NA	NA	0.37	NA	3.5994
1292	19	2110108	2110108	T	C	intronic	AP3D1	NA	NA	NA	intronic	ENSG00000065000	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs113684349	0.07	0.07	0.072	0.0770767	0.1153	NA	0.0677	0.0749	0.1268	0.11	NA	0.09	0.08	0.1295	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.03297	NA	NA	0.15586	0.084275	NA	0.065	NA	3.59934
1292	19	43372857	43372857	G	T	intronic	PSG1	NA	NA	NA	intronic	ENSG00000231924	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs10413496	0.24	0.24	0.215	0.287141	0.0994	0.4167	0.1945	0.3124	0.3783	0.1	0.4	0.14	0.33	0.1957	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.205786	NA	NA	0.105652	0.305169	NA	0.225	NA	3.599248
1292	17	39406567	39406567	C	A	UTR3	KRTAP9-4	NM_033191:c.*130C>A	NA	NA	UTR3	ENSG00000241595	ENST00000334109:c.*130C>A	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs2270179	0.7	0.7	0.6	0.720048	0.7346	0.631	0.8199	0.6619	0.8047	0.72	0.64	0.8	0.66	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.218927	NA	NA	NA	NA	NA	0.536	NA	3.5987334
1292	6	5609666	5609666	A	T	intronic	FARS2	NA	NA	NA	ncRNA_exonic	ENSG00000218574	NA	NA	NA	NA	NA	6p25.1	NA	NA	NA	NA	rs7763749	0.74	0.74	0.669	0.760184	0.7346	0.8591	0.781	0.652	0.816	0.72	0.82	0.78	0.67	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.296363	NA	NA	NA	NA	NA	0.696	NA	3.5987333
1292	6	130381246	130381246	T	C	exonic	L3MBTL3	NA	synonymous SNV	L3MBTL3:NM_001007102:exon9:c.T750C:p.P250P,L3MBTL3:NM_032438:exon10:c.T825C:p.P275P	exonic	ENSG00000198945	NA	synonymous SNV	ENSG00000198945:ENST00000368139:exon8:c.T750C:p.P250P,ENSG00000198945:ENST00000526019:exon9:c.T750C:p.P250P,ENSG00000198945:ENST00000533560:exon9:c.T750C:p.P250P,ENSG00000198945:ENST00000361794:exon10:c.T825C:p.P275P,ENSG00000198945:ENST00000368136:exon10:c.T825C:p.P275P,ENSG00000198945:ENST00000529410:exon12:c.T825C:p.P275P	NA	NA	6q23.1	NA	NA	NA	NA	rs7451021	0.68	0.68	0.637	0.643171	0.6799	0.8522	0.6945	0.469	0.589	0.68	0.85	0.7	0.46	0.6849	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.862028	NA	NA	0.703256	0.509986	NA	0.63	NA	3.5986106
1292	19	33140719	33140719	C	G	intronic	ANKRD27	NA	NA	NA	intronic	ENSG00000105186	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs7246047	0.35	0.35	0.392	0.386981	0.1064	0.4306	0.17	0.7821	0.2505	0.1	0.44	0.18	0.78	0.1963	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.490427	NA	NA	0.098721	0.66591	NA	0.413	NA	3.598579
1292	1	111866640	111866640	C	A	intergenic	CHIA,PIFO	dist=3452;dist=22555	NA	NA	ncRNA_exonic	ENSG00000232240	NA	NA	NA	NA	NA	1p13.2	NA	NA	NA	NA	rs6690266	0.29	0.29	0.274	0.29353	0.4016	0.378	0.1902	0.0923	0.4407	0.4	0.35	0.24	0.08	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.214352	NA	NA	NA	NA	NA	0.297	NA	3.5984
1292	14	89577413	89577413	G	A	intergenic	TTC8,FOXN3	dist=233078;dist=45103	NA	NA	ncRNA_exonic	ENSG00000258990	NA	NA	NA	NA	NA	14q31.3	NA	NA	NA	NA	rs1815281	0.45	0.45	0.463	0.392372	0.4016	0.3938	0.3919	0.5242	0.2035	0.4	0.41	0.4	0.59	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.116812	NA	NA	NA	NA	NA	0.551	NA	3.5984
1292	19	39727480	39727480	G	A	intergenic	SYCN,IFNL3	dist=32574;dist=6792	NA	NA	ncRNA_exonic	ENSG00000268510	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs11883239	0.35	0.35	0.307	0.307109	0.4016	0.4157	0.3458	0.0998	0.3507	0.39	0.47	0.41	0.1	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.585609	NA	NA	NA	NA	NA	0.319	NA	3.5984
1292	1	156351792	156351792	G	A	intronic	RHBG	NA	NA	NA	intronic	ENSG00000132677	NA	NA	NA	NA	NA	1q22	NA	NA	NA	NA	rs3748568	0.55	0.55	0.544	0.536941	0.4016	0.748	0.549	0.5431	0.4417	0.4	0.77	0.55	0.54	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.153956	NA	NA	NA	NA	NA	0.609	NA	3.5984
1292	5	148389763	148389763	G	A	intronic	SH3TC2	NA	NA	NA	intronic	ENSG00000169247	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs1025476	0.37	0.37	0.369	0.377596	0.4016	0.2212	0.304	0.472	0.4387	0.42	0.26	0.33	0.44	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.903665	NA	NA	NA	NA	NA	0.435	NA	3.5984
1292	6	131186578	131186578	T	G	intronic	EPB41L2	NA	NA	NA	intronic	ENSG00000079819	NA	NA	NA	NA	NA	6q23.1	NA	NA	NA	NA	rs7775013	0.36	0.36	0.338	0.328075	0.4016	0.4643	0.3429	0.1354	0.362	0.41	0.46	0.36	0.17	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.038977	NA	NA	NA	NA	NA	0.348	NA	3.5984
1292	7	143043607	143043607	G	C	intronic	CLCN1	NA	NA	NA	intronic	ENSG00000188037	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs2242492	0.41	0.41	0.408	0.414137	0.4016	0.2778	0.3098	0.5885	0.4059	0.39	0.26	0.36	0.64	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.261029	NA	NA	NA	NA	NA	0.478	NA	3.5984
1292	13	111091995	111091995	T	G	intronic	COL4A2	NA	NA	NA	intronic	ENSG00000134871	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs7991229	0.29	0.29	0.285	0.287141	0.4016	0.1419	0.2954	0.2262	0.3957	0.42	0.14	0.32	0.24	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.088715	NA	NA	NA	NA	NA	0.333	NA	3.5984
1292	20	44180868	44180868	A	G	intronic	WFDC8	NA	NA	NA	intronic	ENSG00000158901	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs17433181	0.29	0.29	0.274	0.283347	0.4016	0.0585	0.3444	0.3707	0.2321	0.4	0.05	0.36	0.35	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.850138	3.850138	NA	NA	NA	NA	0.413	NA	3.5984
1292	20	44181669	44181669	A	G	intronic	WFDC8	NA	NA	NA	intronic	ENSG00000158901	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs6032298	0.29	0.29	0.278	0.283347	0.4016	0.0585	0.3444	0.3707	0.2321	0.4	0.05	0.36	0.35	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.551066	NA	NA	NA	NA	NA	0.413	NA	3.5984
1292	20	44181980	44181980	C	A	intronic	WFDC8	NA	NA	NA	intronic	ENSG00000158901	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs3817886	0.29	0.29	0.288	0.283347	0.4016	0.0595	0.3444	0.3707	0.2311	0.4	0.05	0.36	0.35	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.136958	NA	NA	NA	NA	NA	0.413	NA	3.5984
1292	20	44184285	44184285	G	A	intronic	WFDC8	NA	NA	NA	intronic	ENSG00000158901	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs6032305	0.29	0.29	0.295	0.283347	0.4016	0.0585	0.3444	0.3707	0.2321	0.4	0.05	0.36	0.35	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.277054	4.277054	NA	NA	NA	NA	0.413	NA	3.5984
1292	20	44187335	44187335	A	G	intronic	WFDC8	NA	NA	NA	intronic	ENSG00000158901	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs9679769	0.29	0.29	0.295	0.283347	0.4016	0.0585	0.3444	0.3707	0.2321	0.4	0.05	0.36	0.35	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.055157	NA	NA	NA	NA	NA	0.413	NA	3.5984
1292	22	20929286	20929286	C	G	intronic	MED15	NA	NA	NA	intronic	ENSG00000099917	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs165842	0.47	0.47	0.447	0.451278	0.4016	0.5387	0.2723	0.531	0.4315	0.42	0.56	0.31	0.54	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.180653	NA	NA	NA	NA	NA	0.42	NA	3.5984
1292	3	121383297	121383297	G	A	UTR3	GOLGB1	NM_001256487:c.*30C>T,NM_004487:c.*30C>T,NM_001256488:c.*30C>T,NM_001256486:c.*30C>T	NA	NA	UTR3	ENSG00000173230	ENST00000340645:c.*30C>T,ENST00000393667:c.*30C>T,ENST00000482512:c.*9733C>T	NA	NA	NA	NA	3q13.33	NA	NA	NA	NA	rs7153	0.28	0.28	0.258	0.2498	0.2505	0.4841	0.1614	0.1641	0.1861	0.25	0.47	0.2	0.16	0.2394	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.165637	NA	NA	0.245233	0.160009	NA	0.188	NA	3.5982004
1292	7	101916798	101916798	C	A	intronic	CUX1	NA	NA	NA	intronic	ENSG00000257923	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs2974957	0.08	0.08	0.064	0.063099	0.1431	0.0228	0.0922	0.0083	0.0757	0.15	0.03	0.1	0.01	0.1123	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.099964	NA	NA	0.146512	0.026555	NA	0.087	NA	3.598088
1292	6	41217007	41217007	A	C	upstream	TREML5P	NA	NA	NA	ncRNA_intronic	ENSG00000225690	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs2004197	0.41	0.41	0.379	0.361022	0.5686	0.2817	0.5173	0.1785	0.365	0.56	0.28	0.56	0.19	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.276255	NA	NA	NA	NA	NA	0.507	NA	3.5980666
1292	1	21900112	21900112	G	A	intronic	ALPL	NA	NA	NA	intronic	ENSG00000162551	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs74063110	0.28	0.28	0.246	0.271765	0.1252	0.4484	0.2709	0.2821	0.227	0.13	0.49	0.26	0.29	0.1672	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.997316	NA	NA	0.109535	0.250113	NA	0.159	NA	3.598065
1292	1	228480282	228480282	A	G	exonic	OBSCN	NA	synonymous SNV	OBSCN:NM_001098623:exon40:c.A10662G:p.T3554T,OBSCN:NM_052843:exon40:c.A10662G:p.T3554T,OBSCN:NM_001271223:exon45:c.A11949G:p.T3983T	exonic	ENSG00000154358	NA	synonymous SNV	ENSG00000154358:ENST00000359599:exon29:c.A7203G:p.T2401T,ENSG00000154358:ENST00000284548:exon40:c.A10662G:p.T3554T,ENSG00000154358:ENST00000366707:exon40:c.A2019G:p.T673T,ENSG00000154358:ENST00000366709:exon40:c.A2019G:p.T673T,ENSG00000154358:ENST00000422127:exon40:c.A10662G:p.T3554T,ENSG00000154358:ENST00000570156:exon45:c.A11949G:p.T3983T	NA	NA	1q42.13	NA	NA	NA	NA	rs1150908	0.73	0.73	0.708	0.698882	0.672	0.749	0.7147	0.8669	0.4366	0.67	0.74	0.72	0.84	0.6946	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.12311	NA	NA	0.702156	0.831733	NA	0.717	NA	3.5979106
1292	19	2115439	2115439	C	G	intronic	AP3D1	NA	NA	NA	intronic	ENSG00000065000	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs2066764	0.07	0.07	0.073	0.0800719	0.1153	NA	0.0677	0.0862	0.1268	0.11	NA	0.09	0.1	0.1289	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.605198	NA	NA	0.158373	0.09708	NA	0.072	NA	3.597427
1292	7	5760860	5760860	G	A	intronic	RNF216	NA	NA	NA	intronic	ENSG00000011275	NA	NA	NA	NA	NA	7p22.1	NA	NA	NA	NA	rs2302907	0.37	0.37	0.345	0.335463	0.4026	0.13	0.4568	0.3359	0.3916	0.49	0.13	0.54	0.33	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.543205	1.543205	NA	NA	NA	NA	0.449	NA	3.5974
1292	8	135685757	135685757	T	G	intronic	ZFAT	NA	NA	NA	intronic	ENSG00000066827	NA	NA	NA	NA	NA	8q24.22	NA	NA	NA	NA	rs1987027	0.33	0.33	0.317	0.338658	0.4026	0.2907	0.3386	0.2526	0.4387	0.39	0.29	0.34	0.26	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.058721	NA	NA	NA	NA	NA	0.21	NA	3.5974
1292	11	33118274	33118274	A	G	intronic	CSTF3	NA	NA	NA	intronic	ENSG00000176102,ENSG00000176148	NA	NA	NA	NA	NA	11p13	NA	NA	NA	NA	rs7103953	0.28	0.28	0.267	0.232827	0.4026	0.2153	0.2651	0.1014	0.2311	0.39	0.26	0.3	0.11	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.041422	2.041422	NA	NA	NA	NA	0.304	NA	3.5974
1292	19	18971322	18971322	T	C	intronic	UPF1	NA	NA	NA	intronic	ENSG00000005007	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs757115	0.28	0.28	0.234	0.236821	0.4026	0.1696	0.5	0.0431	0.2106	0.39	0.19	0.5	0.06	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.485398	NA	NA	NA	NA	NA	0.196	NA	3.5974
1292	1	186645927	186645927	C	T	intronic	PTGS2	NA	NA	NA	intronic	ENSG00000073756	NA	NA	NA	NA	NA	1q31.1	NA	NA	NA	NA	rs2066826	0.16	0.16	0.155	0.186102	0.1203	0.0397	0.1945	0.3638	0.1585	0.12	0.05	0.22	0.3	0.1435	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.196657	NA	NA	0.139218	0.314033	NA	0.246	NA	3.596982
1292	1	153277660	153277660	A	T	intronic	PGLYRP3	NA	NA	NA	intronic	ENSG00000159527	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs2771112	0.54	0.54	0.55	0.571885	0.4036	0.6895	0.5144	0.6475	0.5624	0.38	0.67	0.5	0.68	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.358262	NA	NA	NA	NA	NA	0.558	NA	3.5964
1292	9	136083695	136083695	C	T	intronic	OBP2B	NA	NA	NA	intronic	ENSG00000171102	NA	NA	NA	NA	NA	9q34.2	NA	NA	NA	NA	rs3891088	0.41	0.41	0.4	0.379792	0.4036	0.5317	0.4207	0.2443	0.3528	0.42	0.54	0.42	0.23	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.498418	NA	NA	NA	NA	NA	0.087	NA	3.5964
1292	10	38380828	38380828	A	G	intergenic	ZNF33A,ZNF37A	dist=31833;dist=2436	NA	NA	ncRNA_exonic	ENSG00000235964	NA	NA	NA	NA	NA	10p11.1	NA	NA	NA	NA	rs2474565	0.43	0.43	0.425	0.40635	0.4036	0.5357	0.4481	0.4191	0.229	0.42	0.51	0.41	0.39	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.470043	NA	NA	NA	NA	NA	0.457	NA	3.5964
1292	12	106480450	106480450	A	G	intronic	NUAK1	NA	NA	NA	intronic	ENSG00000074590	NA	NA	NA	NA	NA	12q23.3	NA	NA	NA	NA	rs2251027	0.39	0.39	0.357	0.409545	0.4036	0.4405	0.4741	0.3555	0.411	0.4	0.43	0.42	0.32	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.402345	NA	NA	NA	NA	NA	0.341	NA	3.5964
1292	14	58060586	58060586	C	T	intronic	SLC35F4	NA	NA	NA	intronic	ENSG00000151812	NA	NA	NA	NA	NA	14q22.3	NA	NA	NA	NA	rs180872	0.29	0.29	0.291	0.279553	0.4036	0.1171	0.4813	0.1566	0.3425	0.41	0.12	0.48	0.18	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.062252	NA	NA	NA	NA	NA	0.268	NA	3.5964
1292	19	9015438	9015438	A	C	intronic	MUC16	NA	NA	NA	intronic	ENSG00000181143	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs34556045	0.33	0.33	NA	0.323882	0.4036	0.3234	0.3646	0.2035	0.3763	0.4	0.3	0.38	0.22	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.245914	NA	NA	NA	NA	NA	NA	NA	3.5964
1292	19	19022007	19022007	C	A	intronic	COPE	NA	NA	NA	intronic	ENSG00000105669,ENSG00000268193	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs1468462	0.27	0.27	0.25	0.23123	0.4036	0.1607	0.5058	0.034	0.1984	0.4	0.17	0.49	0.05	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.429792	NA	NA	NA	NA	NA	0.181	NA	3.5964
1292	15	74177071	74177071	C	A	intronic	TBC1D21	NA	NA	NA	intronic	ENSG00000167139	NA	NA	NA	NA	NA	15q24.1	NA	NA	NA	NA	rs72745335	0.09	0.09	0.069	0.106829	0.1441	0.0526	0.1268	0.0113	0.2393	0.14	0.06	0.14	0.02	0.1331	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.374617	NA	NA	0.126484	0.02525	NA	0.116	NA	3.596316
1292	9	134358719	134358719	G	A	intronic	PRRC2B	NA	NA	NA	intronic	ENSG00000130723	NA	NA	NA	NA	NA	9q34.13	NA	NA	NA	NA	rs41317004	0.07	0.07	0.053	0.0477236	0.16	0.001	0.0634	0.0061	0.0256	0.16	0.0017	0.07	0.0041	0.1092	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.81685	NA	NA	0.13456	0.020823	NA	0.029	NA	3.59624
1292	12	21713308	21713308	T	A	intronic	GYS2	NA	NA	NA	intronic	ENSG00000111713	NA	NA	NA	NA	NA	12p12.1	NA	Name=GR	Name=66	NA	rs4639981	0.77	0.77	0.768	0.754593	0.8072	0.7629	0.7896	0.643	0.818	0.82	0.77	0.78	0.68	0.7896	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.690545	NA	NA	0.807209	0.683159	NA	0.616	NA	3.595991
1292	1	32203163	32203163	C	G	intronic	BAI2	NA	NA	NA	intronic	ENSG00000121753	NA	NA	NA	NA	NA	1p35.2	NA	NA	NA	NA	rs2271931	0.1	0.1	0.073	0.138379	0.1123	0.1141	0.17	0.0333	0.3098	0.12	0.1	0.17	0.03	0.162	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.129412	NA	NA	0.129767	0.046527	NA	0.116	NA	3.595933
1292	3	149087714	149087714	T	C	intronic	TM4SF1	NA	NA	NA	UTR3	ENSG00000169908	ENST00000472441:c.*1733A>G	NA	NA	NA	NA	3q25.1	NA	Name=Pol2	Name=53	NA	rs6776940	0.89	0.89	0.883	0.892372	0.837	0.8641	0.9222	0.9697	0.8528	0.84	0.88	0.92	0.96	0.8771	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.392493	NA	NA	0.856711	0.953224	NA	0.841	NA	3.5958557
1292	10	96044734	96044734	C	A	ncRNA_intronic	PLCE1-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000268894	NA	NA	NA	NA	NA	10q23.33	NA	NA	NA	NA	rs3736901	0.27	0.27	0.216	0.230232	0.3668	0.1617	0.5101	0.0212	0.2444	0.4	0.18	0.46	0.04	0.3431	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.978893	NA	NA	0.360982	0.069722	NA	0.246	NA	3.5957846
1292	8	26441275	26441275	A	G	intronic	DPYSL2	NA	NA	NA	intronic	ENSG00000092964	NA	NA	NA	NA	NA	8p21.2	NA	NA	Name=10	NA	rs415524	0.49	0.49	0.517	0.535743	0.4801	0.2946	0.4308	0.7504	0.6258	0.47	0.31	0.45	0.75	0.4669	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.497745	NA	NA	0.457326	0.685202	NA	0.616	NA	3.595674
1292	17	42155838	42155838	G	A	intronic	HDAC5	NA	NA	NA	intronic	ENSG00000108840	NA	NA	NA	NA	NA	17q21.31	NA	NA	NA	NA	rs9913925	0.13	0.13	0.114	0.116613	0.1262	0.0069	0.0836	0.2685	0.0378	0.12	0.01	0.09	0.3	0.1342	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.212143	NA	NA	0.144103	0.226282	NA	0.123	NA	3.595497
1292	3	10452231	10452231	G	A	intronic	ATP2B2	NA	NA	NA	intronic	ENSG00000157087	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs34907	0.55	0.55	0.541	0.560903	0.4046	0.9643	0.4164	0.3714	0.6646	0.41	0.98	0.41	0.37	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.435549	NA	NA	NA	NA	NA	0.471	NA	3.5954
1292	3	52851137	52851137	T	C	intronic	ITIH4	NA	NA	NA	intronic	ENSG00000055955,ENSG00000243696	NA	NA	NA	NA	NA	3p21.1	NA	NA	NA	NA	rs2240917	0.5	0.5	0.518	0.507788	0.4046	0.37	0.5576	0.7042	0.455	0.41	0.43	0.57	0.66	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.55663	NA	NA	NA	NA	NA	0.486	NA	3.5954
1292	3	52854186	52854186	A	C	intronic	ITIH4	NA	NA	NA	intronic	ENSG00000055955,ENSG00000243696	NA	NA	NA	NA	NA	3p21.1	NA	NA	NA	NA	rs2239548	0.5	0.5	0.486	0.508187	0.4046	0.371	0.5576	0.705	0.455	0.41	0.43	0.57	0.66	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.339988	NA	NA	NA	NA	NA	0.464	NA	3.5954
1292	4	2833966	2833966	G	A	intronic	SH3BP2	NA	NA	NA	intronic	ENSG00000087266	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs231396	0.34	0.34	0.304	0.34385	0.4046	0.4196	0.4035	0.1044	0.4847	0.42	0.4	0.42	0.12	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.466574	NA	NA	NA	NA	NA	0.341	NA	3.5954
1292	4	100261952	100261952	G	A	intronic	ADH1C	NA	NA	NA	intronic	ENSG00000248144	NA	NA	NA	NA	NA	4q23	NA	NA	NA	NA	rs1693471	0.24	0.24	0.211	0.214257	0.4046	0.0764	0.2709	0.0991	0.2761	0.41	0.07	0.31	0.12	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.243914	NA	NA	NA	NA	NA	0.232	NA	3.5954
1292	4	100263778	100263778	T	C	intronic	ADH1C	NA	NA	NA	intronic	ENSG00000248144	NA	NA	NA	NA	NA	4q23	NA	NA	NA	NA	rs1789911	0.24	0.24	0.198	0.214457	0.4046	0.0764	0.2709	0.0998	0.2761	0.42	0.07	0.31	0.12	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.880183	NA	NA	NA	NA	NA	0.232	NA	3.5954
1292	4	100263834	100263834	C	T	intronic	ADH1C	NA	NA	NA	intronic	ENSG00000248144	NA	NA	NA	NA	NA	4q23	NA	NA	NA	NA	rs1693481	0.24	0.24	0.194	0.214657	0.4046	0.0764	0.2709	0.1006	0.2761	0.41	0.07	0.31	0.12	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.118575	NA	NA	NA	NA	NA	0.232	NA	3.5954
1292	4	100268049	100268049	T	G	intronic	ADH1C	NA	NA	NA	intronic	ENSG00000248144	NA	NA	NA	NA	NA	4q23	NA	NA	NA	NA	rs1693431	0.24	0.24	0.199	0.214457	0.4046	0.0764	0.2709	0.0998	0.2761	0.42	0.07	0.31	0.12	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.327106	NA	NA	NA	NA	NA	0.232	NA	3.5954
1292	6	168317994	168317994	C	T	intronic	MLLT4	NA	NA	NA	intronic	ENSG00000130396	NA	NA	NA	NA	NA	6q27	NA	NA	NA	NA	rs9364207	0.52	0.52	0.513	0.547923	0.4046	0.7956	0.5533	0.3911	0.6483	0.42	0.78	0.55	0.36	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.140987	NA	NA	NA	NA	NA	0.406	NA	3.5954
1292	14	58060598	58060598	C	G	intronic	SLC35F4	NA	NA	NA	intronic	ENSG00000151812	NA	NA	NA	NA	NA	14q22.3	NA	NA	NA	NA	rs238377	0.35	0.35	0.364	0.342851	0.4046	0.1161	0.4957	0.3896	0.3415	0.41	0.12	0.49	0.42	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.293901	NA	NA	NA	NA	NA	0.312	NA	3.5954
1292	16	29857316	29857316	G	A	intronic	MVP	NA	NA	NA	intronic	ENSG00000013364	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs4787480	0.13	0.13	0.124	0.127995	0.1292	0.0357	0.085	0.2443	0.0951	0.13	0.04	0.1	0.26	0.1282	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.588556	NA	NA	0.147209	0.238724	NA	0.167	NA	3.595391
1292	14	100376715	100376715	G	A	intronic	EML1	NA	NA	NA	intronic	ENSG00000066629	NA	NA	NA	NA	NA	14q32.2	NA	NA	NA	NA	rs2145859	0.07	0.07	0.062	0.0455272	0.1441	NA	0.0807	0.0045	0.0215	0.14	NA	0.09	0.01	0.1081	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.331251	NA	NA	0.152558	0.031321	NA	0.101	NA	3.595242
1292	22	42139078	42139078	A	G	intronic	MEI1	NA	NA	NA	intronic	ENSG00000167077	NA	NA	NA	NA	NA	22q13.2	NA	Name=CTCF	Name=5	NA	rs5751148	0.84	0.84	0.87	0.840655	0.8022	0.9355	0.5879	0.9796	0.774	0.81	0.94	0.58	0.97	0.7905	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.265147	NA	NA	0.812157	0.951372	NA	0.862	NA	3.595143
1293	10	12140030	12140030	C	G	intronic	DHTKD1	NA	NA	NA	intronic	ENSG00000181192	NA	NA	NA	NA	NA	10p14	NA	Name=JunD	Name=37	NA	rs10906076	0.72	0.72	0.717	0.720847	0.8191	0.7044	0.6844	0.5446	0.9008	0.82	0.7	0.72	0.59	0.7737	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.701828	NA	NA	0.812209	0.592828	NA	0.703	NA	3.594991
1293	22	20731566	20731566	C	G	intergenic	RIMBP3,ZNF74	dist=269780;dist=16839	NA	NA	intronic	ENSG00000161133	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs61752242	0.03	0.03	0.021	0.0225639	0.0408	NA	0.0533	0.0121	0.0194	0.04	NA	0.07	0.01	0.0309	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.539304	2.539304	NA	NA	NA	NA	0.014	NA	3.5949667
1293	12	21621737	21621737	A	G	UTR3	PYROXD1	NM_024854:c.*49A>G	NA	NA	UTR3	ENSG00000121350	ENST00000375266:c.*1478A>G,ENST00000240651:c.*49A>G,ENST00000538582:c.*49A>G	NA	NA	NA	NA	12p12.1	NA	NA	NA	NA	rs12422251	0.33	0.33	0.281	0.336462	0.3668	0.2619	0.3775	0.3381	0.3507	0.36	0.28	0.38	0.32	0.3716	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.0133	NA	NA	NA	NA	NA	0.319	NA	3.5949334
1293	1	228505699	228505699	T	C	exonic	OBSCN	NA	synonymous SNV	OBSCN:NM_001098623:exon53:c.T13956C:p.G4652G,OBSCN:NM_052843:exon53:c.T13956C:p.G4652G,OBSCN:NM_001271223:exon64:c.T16827C:p.G5609G	exonic	ENSG00000154358	NA	synonymous SNV	ENSG00000154358:ENST00000284548:exon53:c.T13956C:p.G4652G,ENSG00000154358:ENST00000366709:exon53:c.T5313C:p.G1771G,ENSG00000154358:ENST00000422127:exon53:c.T13956C:p.G4652G,ENSG00000154358:ENST00000366707:exon59:c.T6858C:p.G2286G,ENSG00000154358:ENST00000570156:exon64:c.T16827C:p.G5609G	NA	NA	1q42.13	NA	NA	NA	NA	rs1188728	0.74	0.74	0.717	0.705871	0.674	0.748	0.719	0.8888	0.4387	0.67	0.74	0.72	0.86	0.6974	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.364459	NA	NA	0.700803	0.856674	NA	0.674	NA	3.5944636
1293	13	101757036	101757036	G	T	intronic	NALCN	NA	NA	NA	intronic	ENSG00000102452	NA	NA	NA	NA	NA	13q33.1	NA	NA	NA	NA	rs41281138	0.09	0.09	0.084	0.10004	0.1362	0.0655	0.1167	0.087	0.1043	0.11	0.05	0.14	0.09	0.121	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.296064	NA	NA	0.148372	0.092147	NA	0.058	NA	3.594428
1293	2	26997031	26997031	G	A	intronic	SLC35F6	NA	NA	NA	intronic	ENSG00000213699	NA	NA	NA	NA	NA	2p23.3	NA	NA	NA	NA	rs13007156	0.29	0.29	0.25	0.268171	0.4056	0.1607	0.4712	0.1278	0.2832	0.4	0.16	0.46	0.14	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.883566	NA	NA	NA	NA	NA	0.341	NA	3.5944
1293	4	877625	877625	G	A	intronic	GAK	NA	NA	NA	intronic	ENSG00000178950	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs3736084	0.38	0.38	0.405	0.401558	0.4056	0.4187	0.4193	0.3631	0.4192	0.4	0.37	0.4	0.36	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.678924	NA	NA	NA	NA	NA	0.42	NA	3.5944
1293	5	1324121	1324121	G	A	intronic	CLPTM1L	NA	NA	NA	intronic	ENSG00000049656	NA	NA	NA	NA	NA	5p15.33	NA	NA	NA	NA	rs414965	0.35	0.35	0.339	0.321086	0.4056	0.1905	0.281	0.4894	0.1697	0.43	0.16	0.31	0.48	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.385866	NA	NA	NA	NA	NA	0.391	NA	3.5944
1293	7	12263799	12263799	T	C	intronic	TMEM106B	NA	NA	NA	intronic	ENSG00000106460	NA	NA	NA	NA	NA	7p21.3	NA	NA	NA	NA	rs11509137	0.44	0.44	0.519	0.595048	0.4056	0.6508	0.5692	0.6793	0.637	0.32	0.57	0.43	0.47	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.322722	NA	NA	NA	NA	NA	NA	NA	3.5944
1293	7	99585150	99585150	G	T	intergenic	AZGP1P1,ZKSCAN1	dist=3290;dist=28069	NA	NA	ncRNA_exonic	ENSG00000214313	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs7803714	0.41	0.41	0.358	0.381789	0.4056	0.6339	0.4914	0.1127	0.3834	0.41	0.65	0.43	0.12	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.439697	NA	1	NA	NA	NA	0.333	NA	3.5944
1293	7	143036548	143036548	T	A	intronic	CLCN1	NA	NA	NA	intronic	ENSG00000188037	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs6464542	0.41	0.41	0.419	0.414537	0.4056	0.2768	0.3098	0.5877	0.4059	0.4	0.26	0.36	0.64	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.081003	NA	NA	NA	NA	NA	0.5	NA	3.5944
1293	8	69016055	69016055	A	G	intronic	PREX2	NA	NA	NA	intronic	ENSG00000046889	NA	NA	NA	NA	NA	8q13.2	NA	NA	NA	NA	rs13262734	0.45	0.45	0.516	0.503794	0.4056	0.4633	0.4669	0.6089	0.5307	0.37	0.44	0.43	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.529161	NA	NA	NA	NA	NA	0.551	NA	3.5944
1293	14	107099502	107099502	T	C	intergenic	LINC00221,NONE	dist=147973;dist=NONE	NA	NA	ncRNA_intronic	ENSG00000253132	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs112024498	0.49	0.49	0.391	0.571685	0.4056	0.5278	0.4467	0.6997	0.7035	0.38	0.46	0.47	0.7	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.843459	NA	NA	NA	NA	NA	0.21	NA	3.5944
1293	14	107099511	107099511	C	A	intergenic	LINC00221,NONE	dist=147982;dist=NONE	NA	NA	ncRNA_intronic	ENSG00000253132	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs72622061	0.51	0.51	0.427	0.572484	0.4056	0.5298	0.4467	0.7012	0.7035	0.4	0.5	0.5	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.248516	NA	NA	NA	NA	NA	0.333	NA	3.5944
1293	15	68695448	68695448	T	C	intronic	ITGA11	NA	NA	NA	intronic	ENSG00000137809	NA	NA	NA	NA	NA	15q23	NA	NA	NA	NA	rs4777049	0.45	0.45	0.408	0.45607	0.4056	0.5536	0.5245	0.3298	0.5297	0.43	0.55	0.48	0.33	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.380432	NA	NA	NA	NA	NA	0.428	NA	3.5944
1293	15	90252238	90252238	C	T	intronic	WDR93	NA	NA	NA	intronic	ENSG00000140527	NA	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs2028298	0.35	0.35	0.359	0.382188	0.4056	0.2083	0.3573	0.4675	0.4397	0.41	0.22	0.38	0.4	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.679451	NA	NA	NA	NA	NA	0.522	NA	3.5944
1293	19	12772263	12772263	T	C	intronic	MAN2B1	NA	NA	NA	intronic	ENSG00000104774	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs2303731	0.3	0.3	0.318	0.308906	0.4056	0.0615	0.2767	0.5113	0.2137	0.4	0.05	0.31	0.44	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.29257	NA	NA	NA	NA	NA	0.362	NA	3.5944
1293	19	17056676	17056676	T	C	intronic	CPAMD8	NA	NA	NA	intronic	ENSG00000160111	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs8105356	0.46	0.46	0.449	0.419529	0.4056	0.374	0.389	0.6293	0.2188	0.42	0.38	0.4	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.704043	NA	NA	NA	NA	NA	0.478	NA	3.5944
1293	19	41010045	41010045	G	T	intronic	SPTBN4	NA	NA	NA	intronic	ENSG00000160460	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs10420988	0.16	0.16	NA	0.125	0.2107	0.1042	0.1239	0.0711	0.1319	0.23	0.12	0.17	0.1	0.1913	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.616133	NA	NA	0.00366	0.001883	NA	NA	NA	3.59434
1293	17	5392161	5392161	C	T	UTR5	MIS12	NM_001258220:c.-22C>T,NM_001258219:c.-22C>T,NM_001258218:c.-22C>T,NM_001258217:c.-22C>T,NM_024039:c.-22C>T	NA	NA	UTR5	ENSG00000167842	ENST00000576988:c.-22C>T,ENST00000576570:c.-22C>T,ENST00000573759:c.-22C>T,ENST00000381165:c.-22C>T	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs929261	0.33	0.33	0.356	0.352436	0.2376	0.3036	0.1527	0.6014	0.3262	0.24	0.31	0.17	0.6	0.2685	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.36932	1.36932	NA	0.23314	0.530867	NA	0.333	NA	3.5940934
1293	2	166514165	166514165	C	G	intronic	CSRNP3	NA	NA	NA	intronic	ENSG00000178662	NA	NA	NA	NA	NA	2q24.3	NA	NA	NA	NA	rs12620509	0.43	0.43	0.424	0.448682	0.4066	0.5645	0.4308	0.3563	0.5102	0.42	0.54	0.44	0.32	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.326058	NA	NA	NA	NA	NA	0.428	NA	3.5934
1293	2	219529348	219529348	C	T	intronic	RNF25	NA	NA	NA	intronic	ENSG00000163481	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs2243911	0.47	0.47	0.516	0.482827	0.4066	0.1796	0.4107	0.9281	0.3231	0.4	0.21	0.4	0.92	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.57403	NA	NA	NA	NA	NA	0.63	NA	3.5934
1293	14	107099559	107099559	A	G	intergenic	LINC00221,NONE	dist=148030;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000253132	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs111398850	0.49	0.49	0.428	0.572883	0.4066	0.5317	0.4481	0.7005	0.7025	0.38	0.49	0.5	0.67	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.898509	1.898509	NA	NA	NA	NA	0.29	NA	3.5934
1293	17	7801509	7801509	C	A	intronic	CHD3	NA	NA	NA	intronic	ENSG00000170004	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs9889962	0.6	0.6	0.588	0.638578	0.4066	0.9653	0.6427	0.5	0.7249	0.41	0.95	0.56	0.53	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.261816	1.261816	NA	NA	NA	NA	0.572	NA	3.5934
1293	17	25887571	25887571	T	C	intronic	KSR1	NA	NA	NA	intronic	ENSG00000141068	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs61054489	0.33	0.33	0.278	0.264377	0.4066	0.4067	0.3732	0.059	0.1718	0.43	0.41	0.35	0.07	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.648925	NA	NA	NA	NA	NA	0.13	NA	3.5934
1293	17	48148413	48148413	G	A	intronic	ITGA3	NA	NA	NA	intronic	ENSG00000005884	NA	NA	NA	NA	NA	17q21.33	NA	NA	NA	NA	rs2301628	0.21	0.21	0.197	0.166534	0.4066	0.0873	0.2522	0.034	0.1196	0.42	0.07	0.25	0.04	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.198861	NA	NA	NA	NA	NA	0.275	NA	3.5934
1293	1	21896918	21896918	G	A	intronic	ALPL	NA	NA	NA	intronic	ENSG00000162551	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs2275376	0.28	0.28	0.271	0.26857	0.1203	0.4544	0.268	0.27	0.228	0.13	0.49	0.26	0.28	0.1756	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.010811	NA	NA	0.11093	0.255561	NA	0.188	NA	3.59317
1293	6	31382964	31382964	A	G	UTR3	MICA	NM_001177519:c.*205A>G,NM_000247:c.*48A>G	NA	NA	ncRNA_UTR3	ENSG00000204520	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs9266829	0.36	0.36	0.277	0.358227	0.3141	0.3006	0.4049	0.4554	0.2986	0.32	0.28	0.46	0.46	0.3093	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.313004	NA	NA	0.284098	0.398844	NA	0.261	NA	3.592502
1293	4	40108750	40108750	C	T	intronic	N4BP2	NA	NA	NA	intronic	ENSG00000078177	NA	NA	NA	NA	NA	4p14	NA	NA	NA	NA	rs1704154	0.42	0.42	0.378	0.467452	0.4076	0.496	0.513	0.3654	0.6053	0.41	0.45	0.49	0.36	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.79757	NA	NA	NA	NA	NA	0.435	NA	3.5924
1293	10	134660951	134660951	A	C	intronic	TTC40	NA	NA	NA	intronic	ENSG00000171811	NA	NA	NA	NA	NA	10q26.3	NA	NA	NA	NA	rs2892211	0.34	0.34	0.242	0.339257	0.4076	0.2679	0.5259	0.1914	0.41	0.4	0.27	0.5	0.2	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.345859	NA	NA	NA	NA	NA	0.203	NA	3.5924
1293	20	47843146	47843146	A	T	intronic	DDX27	NA	NA	NA	intronic	ENSG00000124228	NA	NA	NA	NA	NA	20q13.13	NA	NA	NA	NA	rs6067024	0.3	0.3	0.268	0.279153	0.4076	0.3204	0.3285	0.0832	0.3344	0.41	0.29	0.35	0.11	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.264805	NA	NA	NA	NA	NA	0.232	NA	3.5924
1293	6	160969738	160969738	C	G	intronic	LPA	NA	NA	NA	intronic	ENSG00000198670	NA	NA	NA	NA	Name=Coronary heart disease	6q25.3	NA	NA	NA	NA	rs10755578	0.41	0.41	0.422	0.409545	0.492	0.4444	0.3069	0.3359	0.4611	0.48	0.44	0.32	0.34	0.4473	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.485305	NA	NA	0.468597	0.348774	NA	0.312	NA	3.592103
1293	1	21900146	21900146	C	G	intronic	ALPL	NA	NA	NA	intronic	ENSG00000162551	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs75829132	0.28	0.28	0.229	0.271765	0.1252	0.4484	0.2709	0.2821	0.227	0.13	0.49	0.26	0.29	0.1779	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.129067	NA	NA	0.104884	0.233318	NA	0.181	NA	3.592016
1293	9	134015899	134015899	C	G	intronic	NUP214	NA	NA	NA	ncRNA_intronic	ENSG00000236986	NA	NA	NA	NA	NA	9q34.13	NA	NA	NA	NA	rs2281902	0.3	0.3	0.308	0.311102	0.2356	0.4206	0.1758	0.3359	0.3384	0.23	0.42	0.18	0.35	0.2646	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.10328	NA	NA	0.241163	0.316818	ID=COSN168686;OCCURENCE=1(large_intestine)	0.406	NA	3.5919703
1293	6	32548662	32548662	T	C	intronic	HLA-DRB1	NA	NA	NA	intronic	ENSG00000196126	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs34368612	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4081	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.276433	NA	NA	NA	NA	NA	0.297	NA	3.5919
1293	18	29040756	29040756	T	A	intronic	DSG3	NA	NA	NA	intronic	ENSG00000134757	NA	NA	NA	NA	NA	18q12.1	NA	NA	NA	NA	rs3737364	0.14	0.14	0.128	0.13758	0.1421	0.0833	0.1095	0.2118	0.1084	0.13	0.09	0.12	0.21	0.1413	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.160374	NA	NA	0.124796	0.199678	NA	0.239	NA	3.591804
1293	10	24447600	24447600	A	G	intronic	KIAA1217	NA	NA	NA	ncRNA_exonic	ENSG00000223928	NA	NA	NA	NA	NA	10p12.2	NA	NA	NA	NA	rs1529529	0.59	0.59	0.56	0.586262	0.7416	0.3998	0.6124	0.5197	0.6902	0.73	0.43	0.6	0.54	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.665044	NA	NA	NA	NA	NA	0.529	NA	3.5917333
1293	15	25326425	25326425	A	T	upstream	SNORD116-15	NA	NA	NA	ncRNA_intronic	ENSG00000224078	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs1972694	0.14	0.14	0.12	0.177716	0.1839	0.1369	0.2233	0.0507	0.3528	0.18	0.15	0.19	0.05	0.2028	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.299428	NA	NA	0.188348	0.074201	NA	0.109	NA	3.5916186
1293	7	44281475	44281475	T	A	intronic	CAMK2B	NA	NA	NA	intronic	ENSG00000058404	NA	NA	NA	NA	NA	7p13	NA	NA	NA	NA	rs2075073	0.3	0.3	0.254	0.291733	0.4085	0.2202	0.2925	0.1619	0.4202	0.39	0.24	0.33	0.2	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.068563	NA	NA	NA	NA	NA	0.319	NA	3.5915
1293	11	5877909	5877909	C	T	downstream	OR52E8	NA	NA	NA	UTR3	ENSG00000183269	ENST00000537935:c.*70G>A	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs12417880	0.4	0.4	0.408	0.384784	0.4085	0.373	0.4164	0.41	0.316	0.42	0.37	0.43	0.38	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.07599	NA	NA	NA	NA	NA	0.384	NA	3.5915
1293	19	8174724	8174724	C	T	intronic	FBN3	NA	NA	NA	intronic	ENSG00000142449	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs11672038	0.39	0.39	0.363	0.426518	0.4085	0.5139	0.3602	0.2738	0.6084	0.41	0.5	0.37	0.24	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.777288	NA	NA	NA	NA	NA	0.435	NA	3.5915
1293	19	58288169	58288169	C	T	intronic	ZNF586	NA	NA	NA	intronic	ENSG00000083828	NA	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs2285615	0.53	0.53	0.547	0.485823	0.4085	0.4702	0.5029	0.7595	0.1994	0.41	0.51	0.51	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.365926	NA	NA	NA	NA	NA	0.514	NA	3.5915
1293	22	30200893	30200893	G	C	intronic	ASCC2	NA	NA	NA	intronic	ENSG00000100325	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs2074706	0.37	0.37	0.372	0.296526	0.4085	0.5675	0.2522	0.143	0.1411	0.42	0.57	0.29	0.13	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.874484	3.874484	NA	NA	NA	NA	0.304	NA	3.5915
1293	7	540741	540741	G	A	intronic	PDGFA	NA	NA	NA	intronic	ENSG00000197461	NA	NA	NA	NA	NA	7p22.3	NA	NA	Name=2	NA	rs1800814	0.51	0.51	0.504	0.48143	0.4553	0.495	0.5072	0.556	0.3753	0.47	0.5	0.54	0.55	0.4819	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.535473	NA	NA	0.471369	0.561734	NA	0.507	NA	3.591431
1293	20	13830102	13830102	C	T	UTR3	SEL1L2	NM_001271539:c.*29G>A	NA	NA	UTR3	ENSG00000101251	ENST00000475649:c.*351G>A,ENST00000378072:c.*29G>A,ENST00000423870:c.*1680G>A,ENST00000284951:c.*29G>A	NA	NA	NA	NA	20p12.1	NA	NA	NA	NA	rs2073289	0.16	0.16	0.135	0.142572	0.2594	0.0913	0.2363	0.0121	0.1851	0.27	0.09	0.23	0.02	0.2266	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.93265	NA	NA	0.256089	0.048957	NA	0.196	NA	3.5912444
1293	4	55133936	55133936	C	T	intronic	PDGFRA	NA	NA	NA	intronic	ENSG00000134853,ENSG00000145216	NA	NA	NA	NA	NA	4q12	NA	NA	NA	NA	rs28489067	0.2	0.2	0.155	0.221845	0.1203	0.2004	0.317	0.2542	0.2372	0.13	0.21	0.27	0.23	0.1813	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.172293	3.172293	NA	0.107193	0.19655	NA	0.261	NA	3.591207
1293	17	48245269	48245269	C	A	intronic	SGCA	NA	NA	NA	intronic	ENSG00000108823	NA	NA	NA	NA	NA	17q21.33	NA	NA	NA	NA	rs59944537	0.11	0.11	0.101	0.122404	0.1292	0.0337	0.196	0.143	0.1268	0.13	0.04	0.17	0.14	0.1419	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.538421	NA	NA	0.137907	0.150704	NA	0.174	NA	3.590993
1293	3	182673196	182673196	C	T	intronic	DCUN1D1	NA	NA	NA	ncRNA_exonic	ENSG00000244346	NA	NA	NA	NA	NA	3q26.33	NA	NA	NA	NA	rs7641401	0.59	0.59	0.569	0.610823	0.7425	0.2708	0.7017	0.7398	0.5869	0.72	0.25	0.65	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.512039	NA	NA	NA	NA	NA	0.609	NA	3.5908333
1293	3	182673259	182673259	C	T	intronic	DCUN1D1	NA	NA	NA	ncRNA_exonic	ENSG00000244346	NA	NA	NA	NA	NA	3q26.33	NA	NA	NA	NA	rs7641467	0.58	0.58	0.574	0.596046	0.7425	0.2708	0.7003	0.6853	0.5859	0.72	0.25	0.65	0.69	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.42808	NA	NA	NA	NA	NA	0.572	NA	3.5908333
1293	1	1233941	1233941	T	C	intronic	ACAP3	NA	NA	NA	intronic	ENSG00000131584	NA	NA	NA	NA	NA	1p36.33	NA	NA	NA	NA	rs1739855	0.46	0.46	0.385	0.496805	0.0825	0.7659	0.2608	0.8169	0.3804	0.09	0.73	0.27	0.84	0.2527	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.725531	NA	NA	0.07404	0.712369	NA	0.384	NA	3.59076
1293	1	3593006	3593006	G	T	intronic	TP73	NA	NA	NA	intronic	ENSG00000078900	NA	NA	NA	NA	NA	1p36.32	NA	NA	NA	NA	rs12028205	0.35	0.35	0.287	0.365415	0.4095	0.3056	0.5159	0.2345	0.4519	0.42	0.3	0.48	0.22	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.610623	NA	NA	NA	NA	NA	0.261	NA	3.5905
1293	1	179503806	179503806	G	A	intronic	AXDND1	NA	NA	NA	intronic	ENSG00000162779	NA	NA	NA	NA	NA	1q25.2	NA	NA	NA	NA	rs6425572	0.36	0.36	0.324	0.352636	0.4095	0.4256	0.3963	0.146	0.4673	0.4	0.46	0.43	0.13	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.796873	NA	NA	NA	NA	NA	0.391	NA	3.5905
1293	1	233489499	233489499	A	G	intronic	KIAA1804	NA	NA	NA	intronic	ENSG00000143674	NA	NA	NA	NA	NA	1q42.2	NA	NA	NA	NA	rs7539016	0.5	0.5	0.48	0.510383	0.4095	0.5595	0.6153	0.5159	0.4816	0.41	0.55	0.58	0.53	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.55385	NA	NA	NA	NA	ID=COSN163476;OCCURENCE=1(breast)	0.529	NA	3.5905
1293	1	236275380	236275380	A	G	intergenic	NID1,GPR137B	dist=46899;dist=30452	NA	NA	ncRNA_exonic	ENSG00000235371	NA	NA	NA	NA	NA	1q42.3	NA	NA	NA	NA	rs10924217	0.51	0.51	0.491	0.520367	0.4095	0.4683	0.5346	0.7534	0.363	0.41	0.46	0.49	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.58504	NA	NA	NA	NA	NA	0.464	NA	3.5905
1293	2	38542573	38542573	T	C	intronic	ATL2	NA	NA	NA	intronic	ENSG00000119787	NA	NA	NA	NA	NA	2p22.2	NA	NA	NA	NA	rs12712583	0.44	0.44	0.441	0.490016	0.4095	0.1944	0.389	0.8238	0.498	0.41	0.19	0.4	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.297578	NA	NA	NA	NA	NA	0.478	NA	3.5905
1293	6	135511108	135511108	A	T	intronic	MYB	NA	NA	NA	intronic	ENSG00000118513	NA	NA	NA	NA	NA	6q23.3	NA	NA	NA	NA	rs210796	0.38	0.38	0.34	0.38738	0.4095	0.4375	0.428	0.3086	0.3906	0.41	0.41	0.41	0.27	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.363336	NA	NA	NA	NA	NA	0.42	NA	3.5905
1293	12	52710198	52710198	C	T	intronic	KRT83	NA	NA	NA	intronic	ENSG00000170523	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs55722266	0.36	0.36	0.356	0.375799	0.4095	0.1885	0.317	0.5008	0.407	0.4	0.19	0.33	0.51	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.749977	NA	NA	NA	NA	NA	0.406	NA	3.5905
1293	12	52710897	52710897	T	C	intronic	KRT83	NA	NA	NA	intronic	ENSG00000170523	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs2852463	0.31	0.31	0.328	0.375799	0.4095	0.1885	0.317	0.5008	0.407	0.35	0.17	0.3	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.064687	NA	NA	NA	NA	ID=COSN164256;OCCURENCE=1(breast)	NA	NA	3.5905
1293	12	52710898	52710898	G	A	intronic	KRT83	NA	NA	NA	intronic	ENSG00000170523	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs2857668	0.31	0.31	0.324	0.375599	0.4095	0.1885	0.317	0.5008	0.4059	0.34	0.17	0.3	0.42	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.683638	NA	NA	NA	NA	ID=COSN164257;OCCURENCE=1(breast)	NA	NA	3.5905
1293	12	52710913	52710913	A	G	intronic	KRT83	NA	NA	NA	intronic	ENSG00000170523	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs2852462	0.36	0.36	0.349	0.375799	0.4095	0.1885	0.317	0.5008	0.407	0.4	0.19	0.33	0.51	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.04735	NA	NA	NA	NA	ID=COSN164258;OCCURENCE=1(breast)	0.428	NA	3.5905
1293	14	94519199	94519199	C	T	intronic	DDX24	NA	NA	NA	intronic	ENSG00000089737	NA	NA	NA	NA	NA	14q32.12	NA	NA	NA	NA	rs3790045	0.52	0.52	0.528	0.491813	0.4095	0.4315	0.5346	0.6853	0.3466	0.42	0.48	0.5	0.73	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.459278	NA	NA	NA	NA	NA	0.565	NA	3.5905
1293	14	94527525	94527525	C	T	intronic	DDX24	NA	NA	NA	intronic	ENSG00000089737	NA	NA	NA	NA	NA	14q32.12	NA	NA	NA	NA	rs11846519	0.55	0.55	0.56	0.535144	0.4095	0.4315	0.549	0.8411	0.3476	0.42	0.48	0.51	0.86	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.907702	NA	NA	NA	NA	NA	0.587	NA	3.5905
1293	14	101011209	101011209	A	G	intronic	BEGAIN	NA	NA	NA	intronic	ENSG00000183092	NA	NA	NA	NA	NA	14q32.2	NA	NA	NA	NA	rs4074037	0.65	0.65	0.664	0.64377	0.4095	0.7034	0.6182	0.969	0.4018	0.42	0.73	0.62	0.96	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.596172	NA	NA	NA	NA	NA	0.601	NA	3.5905
1293	16	5415915	5415915	A	G	intergenic	FAM86A,RBFOX1	dist=268126;dist=653217	NA	NA	ncRNA_exonic	ENSG00000261007	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs490052	0.44	0.44	0.403	0.417931	0.4095	0.6865	0.4885	0.1634	0.4438	0.41	0.68	0.46	0.17	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.282289	NA	NA	NA	NA	NA	0.355	NA	3.5905
1293	17	5415380	5415380	G	A	intronic	NLRP1	NA	NA	NA	intronic	ENSG00000091592	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs4790774	0.54	0.54	0.535	0.560903	0.4095	0.874	0.3674	0.4637	0.6626	0.42	0.86	0.37	0.46	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.169631	NA	NA	NA	NA	NA	0.471	NA	3.5905
1293	17	80763983	80763983	C	T	intronic	TBCD	NA	NA	NA	intronic	ENSG00000141556	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs582192	0.37	0.37	0.356	0.347843	0.4095	0.3661	0.3256	0.3245	0.3129	0.42	0.38	0.37	0.3	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.702008	NA	NA	NA	NA	NA	0.377	NA	3.5905
1293	4	55133959	55133959	C	T	intronic	PDGFRA	NA	NA	NA	intronic	ENSG00000134853,ENSG00000145216	NA	NA	NA	NA	NA	4q12	NA	NA	NA	NA	rs28650939	0.2	0.2	0.18	0.232029	0.1213	0.1994	0.3473	0.2678	0.2495	0.13	0.2	0.27	0.24	0.1765	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.285202	NA	NA	0.111737	0.229224	NA	0.261	NA	3.590463
1293	1	21896887	21896887	G	T	intronic	ALPL	NA	NA	NA	intronic	ENSG00000162551	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs2275377	0.28	0.28	0.26	0.267572	0.1203	0.4544	0.268	0.2663	0.228	0.13	0.49	0.26	0.28	0.1781	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.764851	NA	NA	0.111163	0.251475	NA	0.174	NA	3.590437
1293	9	27218715	27218715	C	A	intronic	TEK	NA	NA	NA	intronic	ENSG00000120156	NA	NA	NA	NA	NA	9p21.2	NA	NA	NA	NA	rs10121367	0.24	0.24	0.242	0.269169	0.1829	0.1895	0.2089	0.4766	0.2025	0.2	0.18	0.18	0.4	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.425308	NA	NA	0.226901	0.461705	NA	0.275	NA	3.590199
1293	6	138971281	138971281	C	G	intergenic	NHSL1,FLJ46906	dist=77613;dist=41524	NA	NA	intronic	ENSG00000135540	NA	NA	NA	NA	NA	6q23.3	NA	NA	NA	NA	rs75413859	0.04	0.04	0.029	0.0245607	0.0765	NA	0.0461	0.0023	0.0112	0.09	NA	0.06	0.002	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.003113	NA	NA	NA	NA	NA	0.022	NA	3.5901667
1293	12	10313358	10313358	C	G	intronic	OLR1	NA	NA	NA	intronic	ENSG00000173391	NA	NA	NA	NA	NA	12p13.2	NA	NA	Name=19	NA	rs3736232	0.35	0.35	0.303	0.31869	0.5109	0.2381	0.5403	0.1732	0.2434	0.5	0.23	0.48	0.15	0.4227	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.082793	NA	NA	0.476512	0.223105	NA	0.312	NA	3.589888
1293	22	42139054	42139054	G	A	intronic	MEI1	NA	NA	NA	intronic	ENSG00000167077	NA	NA	NA	NA	NA	22q13.2	NA	Name=CTCF	Name=5	NA	rs5751147	0.84	0.84	0.875	0.840256	0.8012	0.9355	0.5879	0.9788	0.774	0.81	0.94	0.58	0.97	0.7971	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.474057	NA	NA	0.811888	0.951141	NA	0.862	NA	3.589812
1293	5	132939361	132939361	A	G	intronic	FSTL4	NA	NA	NA	intronic	ENSG00000053108	NA	NA	NA	NA	NA	5q31.1	NA	NA	NA	NA	rs409855	0.44	0.44	0.44	0.460663	0.4105	0.3423	0.3473	0.6127	0.5092	0.43	0.37	0.39	0.59	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.023513	NA	NA	NA	NA	NA	0.341	NA	3.5895
1293	6	161319672	161319672	G	A	intergenic	PLG,MAP3K4	dist=144587;dist=93150	NA	NA	ncRNA_intronic	ENSG00000224371	NA	NA	NA	NA	NA	6q26	NA	NA	NA	NA	rs11970528	0.34	0.34	0.335	0.317891	0.4105	0.1696	0.3069	0.4054	0.2648	0.41	0.19	0.33	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.015612	NA	NA	NA	NA	ID=COSN167928;OCCURENCE=1(large_intestine)	0.391	NA	3.5895
1293	7	64639926	64639926	C	G	intergenic	CCT6P3,ZNF92	dist=104835;dist=198842	NA	NA	ncRNA_intronic	ENSG00000164669	NA	NA	NA	NA	NA	7q11.21	NA	NA	NA	NA	rs80126668	NA	NA	NA	0.402556	0.4105	0.2748	0.4481	0.4743	0.3967	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.298115	NA	NA	NA	NA	NA	0.007	NA	3.5895
1293	7	142469191	142469191	G	A	intergenic	PRSS1,PRSS3P2	dist=8264;dist=9566	NA	NA	ncRNA_intronic	ENSG00000250591	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs13225332	0.56	0.56	0.574	0.610423	0.4105	0.7669	0.4697	0.6717	0.6718	0.41	0.75	0.46	0.66	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.040734	NA	NA	NA	NA	NA	0.565	NA	3.5895
1293	8	145010305	145010305	A	G	intronic	PLEC	NA	NA	NA	intronic	ENSG00000178209	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs6988767	0.29	0.29	0.273	0.305312	0.4105	0.1458	0.3026	0.3215	0.3415	0.4	0.16	0.3	0.27	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.630266	1.630266	NA	NA	NA	NA	0.312	NA	3.5895
1293	11	60706864	60706864	G	A	intronic	SLC15A3	NA	NA	NA	intronic	ENSG00000110446	NA	NA	NA	NA	NA	11q12.2	NA	NA	NA	NA	rs554397	0.41	0.41	0.434	0.422524	0.4105	0.3165	0.4467	0.472	0.4601	0.41	0.32	0.45	0.47	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.092193	NA	NA	NA	NA	NA	0.493	NA	3.5895
1293	11	92577031	92577031	C	T	intronic	FAT3	NA	NA	NA	intronic	ENSG00000165323	NA	NA	NA	NA	NA	11q14.3	NA	NA	NA	NA	rs4753068	0.4	0.4	0.39	0.385982	0.4105	0.4464	0.4164	0.298	0.3957	0.4	0.47	0.41	0.31	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.910766	NA	NA	NA	NA	NA	0.406	NA	3.5895
1293	19	5219803	5219803	T	C	intronic	PTPRS	NA	NA	NA	intronic	ENSG00000105426	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs12975955	0.38	0.38	0.346	0.376198	0.4105	0.5982	0.3127	0.1762	0.4274	0.39	0.61	0.28	0.17	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.385139	NA	NA	NA	NA	NA	0.42	NA	3.5895
1293	20	60448675	60448675	C	T	intronic	CDH4	NA	NA	NA	intronic	ENSG00000179242	NA	NA	NA	NA	NA	20q13.33	NA	NA	NA	NA	rs3829689	0.24	0.24	0.243	0.203474	0.4105	0.1181	0.2983	0.0401	0.2321	0.42	0.11	0.31	0.06	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.074315	NA	NA	NA	NA	NA	0.29	NA	3.5895
1293	21	34708061	34708061	A	G	intronic	IFNAR1	NA	NA	NA	intronic	ENSG00000142166	NA	NA	NA	NA	NA	21q22.11	NA	NA	NA	NA	rs2243594	0.37	0.37	0.363	0.362819	0.4105	0.3621	0.3674	0.3071	0.3865	0.41	0.36	0.36	0.31	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.555992	2.555992	NA	NA	NA	NA	0.348	NA	3.5895
1293	4	104000973	104000973	G	C	intronic	BDH2	NA	NA	NA	intronic	ENSG00000164038,ENSG00000164039	NA	NA	NA	NA	NA	4q24	NA	NA	NA	NA	rs12504262	0.22	0.22	0.216	0.266973	0.2078	0.1617	0.232	0.3654	0.3282	0.2	0.14	0.23	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.844727	NA	NA	0.202703	0.315751	NA	0.319	NA	3.589497
1293	19	5218836	5218836	G	A	intronic	PTPRS	NA	NA	NA	intronic	ENSG00000105426	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs73543273	0.14	0.14	0.141	0.140974	0.1372	NA	0.1037	0.3124	0.0849	0.13	NA	0.09	0.34	0.1335	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.542511	NA	NA	0.139884	0.259419	NA	0.072	NA	3.589416
1293	19	41034912	41034912	G	A	intronic	SPTBN4	NA	NA	NA	intronic	ENSG00000160460	NA	NA	NA	NA	NA	19q13.2	NA	Name=GATA-1	NA	NA	rs1461008	0.35	0.35	0.381	0.323083	0.4732	0.0595	0.2867	0.441	0.3067	0.48	0.06	0.33	0.49	0.4179	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.206008	NA	NA	0.519651	0.439401	NA	0.319	NA	3.589249
1293	15	22929905	22929905	C	G	intronic	CYFIP1	NA	NA	NA	intronic	ENSG00000068793	NA	NA	NA	NA	NA	15q11.2	NA	Name=MafK_(ab50322)	NA	NA	rs2305094	0.43	0.43	0.475	0.42512	0.4871	0.3155	0.5735	0.4818	0.2924	0.43	0.34	0.52	0.47	0.4652	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.957481	NA	NA	0.458488	0.475034	NA	NA	NA	3.589212
1293	21	44317003	44317003	T	G	intronic	NDUFV3	NA	NA	NA	intronic	ENSG00000160194	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs9974287	0.17	0.17	0.172	0.171326	0.1372	NA	0.098	0.4486	0.0603	0.13	NA	0.12	0.45	0.1299	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.190692	NA	NA	0.143837	0.391966	NA	0.217	NA	3.589063
1293	15	100692782	100692782	C	G	intronic	ADAMTS17	NA	NA	NA	intronic	ENSG00000140470	NA	NA	NA	NA	NA	15q26.3	NA	NA	NA	NA	rs7162227	0.11	0.11	0.082	0.0994409	0.1392	0.0804	0.1988	0.0212	0.1135	0.14	0.09	0.2	0.01	0.1347	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.454088	NA	NA	0.137209	0.041307	NA	0.152	NA	3.588891
1293	12	40714009	40714009	A	G	intronic	LRRK2	NA	NA	NA	intronic	ENSG00000188906	NA	NA	NA	NA	NA	12q12	NA	NA	NA	NA	rs11564205	0.11	0.11	0.118	0.123003	0.1412	0.001	0.0778	0.2118	0.1421	0.14	0.0017	0.09	0.21	0.1286	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.145315	NA	NA	0.14144	0.202208	NA	0.109	NA	3.58876
1293	19	49351149	49351149	C	T	intronic	PLEKHA4	NA	NA	NA	intronic	ENSG00000105559	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs28556985	0.07	0.07	0.067	0.0585064	0.1551	NA	0.072	0.0272	0.0521	0.15	NA	0.08	0.02	0.1054	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.816575	NA	NA	0.150814	0.051067	NA	0.116	NA	3.588686
1293	22	23077258	23077258	T	C	intergenic	GGTLC2,MIR650	dist=86890;dist=88012	NA	NA	intronic	ENSG00000211664	NA	NA	NA	NA	NA	22q11.22	NA	NA	NA	NA	rs451894	0.01	0.01	0.012	0.00958466	0.0298	0.002	0.013	NA	0.0072	0.03	0.0035	0.02	NA	0.0222	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.574201	NA	NA	0.026143	0.00579	NA	0.007	NA	3.5885237
1293	8	61851466	61851466	T	C	intergenic	CHD7,LOC100130298	dist=70880;dist=27214	NA	NA	ncRNA_exonic	ENSG00000255397	NA	NA	NA	NA	NA	8q12.2	NA	NA	NA	NA	rs3748648	0.32	0.32	0.267	0.258586	0.4115	0.2123	0.5317	0.1452	0.1084	0.41	0.23	0.51	0.14	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.025538	NA	NA	NA	NA	NA	0.196	NA	3.5885
1293	4	36148837	36148837	T	C	intronic	ARAP2	NA	NA	NA	intronic	ENSG00000047365	NA	NA	NA	NA	NA	4p14	NA	NA	NA	NA	rs73225587	0.35	0.35	0.293	0.32488	0.4115	0.4544	0.3559	0.0613	0.4366	0.43	0.47	0.36	0.07	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.004663	NA	NA	NA	NA	NA	0.326	NA	3.5885
1293	6	128306769	128306769	C	T	intronic	PTPRK	NA	NA	NA	intronic	ENSG00000152894	NA	NA	NA	NA	NA	6q22.33	NA	NA	NA	NA	rs6919966	0.46	0.46	0.467	0.453874	0.4115	0.5139	0.4597	0.4735	0.4049	0.41	0.52	0.43	0.48	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.807462	NA	NA	NA	NA	NA	0.399	NA	3.5885
1293	8	135613597	135613597	T	C	intronic	ZFAT	NA	NA	NA	intronic	ENSG00000066827	NA	NA	NA	NA	NA	8q24.22	NA	NA	NA	NA	rs894346	0.48	0.48	0.424	0.473243	0.4115	0.5476	0.6239	0.3661	0.498	0.41	0.55	0.6	0.4	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.090652	NA	NA	NA	NA	NA	0.399	NA	3.5885
1293	8	135613624	135613624	A	G	intronic	ZFAT	NA	NA	NA	intronic	ENSG00000066827	NA	NA	NA	NA	NA	8q24.22	NA	NA	NA	NA	rs894347	0.48	0.48	0.43	0.473243	0.4115	0.5476	0.6239	0.3661	0.498	0.41	0.55	0.6	0.4	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.822859	NA	NA	NA	NA	NA	0.326	NA	3.5885
1293	15	90252265	90252265	G	T	intronic	WDR93	NA	NA	NA	intronic	ENSG00000140527	NA	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs4353458	0.35	0.35	0.378	0.384385	0.4115	0.2083	0.3573	0.4705	0.4407	0.41	0.22	0.38	0.4	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.980112	NA	NA	NA	NA	NA	0.514	NA	3.5885
1293	22	38308291	38308291	C	T	intronic	MICALL1	NA	NA	NA	intronic	ENSG00000100139	NA	NA	NA	NA	NA	22q13.1	NA	NA	NA	NA	rs1003689	0.36	0.36	0.372	0.357628	0.4115	0.1766	0.3761	0.4297	0.3783	0.42	0.18	0.41	0.46	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.916373	NA	NA	NA	NA	NA	0.377	NA	3.5885
1293	15	49917341	49917341	G	A	UTR5	DTWD1	NM_001144955:c.-24G>A,NM_020234:c.-24G>A	NA	NA	UTR5	ENSG00000104047	ENST00000403028:c.-24G>A,ENST00000329873:c.-24G>A,ENST00000557968:c.-24G>A,ENST00000558653:c.-24G>A,ENST00000557988:c.-24G>A,ENST00000559164:c.-24G>A,ENST00000560632:c.-24G>A,ENST00000559405:c.-24G>A,ENST00000251250:c.-24G>A	NA	NA	NA	NA	15q21.2	NA	NA	NA	NA	rs3210227	0.14	0.14	0.117	0.121006	0.2753	0.005	0.1571	0.0393	0.1667	0.27	0.01	0.17	0.04	0.2139	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.431889	NA	NA	0.255665	0.066055	NA	0.101	NA	3.5884684
1293	2	29416794	29416794	G	A	intronic	ALK	NA	NA	NA	intronic	ENSG00000171094	NA	NA	NA	NA	NA	2p23.2	NA	NA	NA	NA	rs17007646	0.16	0.16	0.163	0.160942	0.1531	0.001	0.121	0.407	0.0297	0.16	0.0017	0.11	0.39	0.1311	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.629118	NA	NA	0.127354	0.348923	NA	0.225	NA	3.588446
1293	6	35104018	35104018	C	A	intronic	TCP11	NA	NA	NA	intronic	ENSG00000124678	NA	NA	NA	NA	NA	6p21.31	Score=797;Name=V$HNF1_C	NA	NA	NA	rs12661389	0.33	0.33	0.305	0.310903	0.4851	0.2599	0.4496	0.0234	0.4744	0.5	0.27	0.47	0.03	0.4605	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.695142	1.695142	NA	0.465992	0.096009	NA	0.246	NA	3.588408
1293	22	23077262	23077262	T	C	intergenic	GGTLC2,MIR650	dist=86894;dist=88008	NA	NA	intronic	ENSG00000211664	NA	NA	NA	NA	NA	22q11.22	NA	NA	NA	NA	rs451895	0.01	0.01	0.012	0.00958466	0.0298	0.002	0.013	NA	0.0072	0.03	0.0035	0.02	NA	0.0222	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.465424	NA	NA	0.026285	0.006041	NA	0.007	NA	3.5883817
1293	11	48997107	48997107	G	A	intergenic	OR4A47,TRIM49B	dist=485833;dist=56045	NA	NA	ncRNA_exonic	ENSG00000220948	NA	NA	NA	NA	NA	11p11.12	NA	NA	NA	NA	rs2047941	0.22	0.22	0.19	0.272564	0.1799	0.4028	0.2363	0.1188	0.4673	0.18	0.36	0.2	0.13	0.2319	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.041063	NA	NA	NA	NA	NA	0.21	NA	3.5882
1293	12	104489120	104489120	T	C	intronic	HCFC2	NA	NA	NA	intronic	ENSG00000111727	NA	NA	NA	NA	NA	12q23.3	NA	NA	NA	NA	rs2272477	0.15	0.15	0.142	0.159744	0.1382	0.1756	0.1023	0.1725	0.1892	0.14	0.18	0.12	0.17	0.1485	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.038317	NA	NA	0.125262	0.167726	NA	0.145	NA	3.588038
1293	19	14975368	14975368	A	G	intergenic	OR7A10,OR7A17	dist=22679;dist=15870	NA	NA	ncRNA_exonic	ENSG00000172148	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs10415965	0.76	0.76	0.76	0.765775	0.6869	0.9435	0.683	0.7375	0.7607	0.71	0.91	0.67	0.72	0.7253	0.91	0.06	T	.	.	.	.	0.467	N	1.000	P	.	.	.	.	-1.048	T	0.000	T	.	-0.981	0.289	1.21	-0.043	-0.364	6.532	-0.98113	NA	0.1	NA	NA	NA	0.812	NA	3.5878
1293	11	61624414	61624414	T	C	intronic	FADS2	NA	NA	NA	intronic	ENSG00000134824	NA	NA	NA	NA	NA	11q12.2	NA	NA	NA	NA	rs174602	0.39	0.39	0.349	0.422923	0.2127	0.3651	0.5245	0.7405	0.1973	0.21	0.27	0.51	0.73	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.882621	NA	NA	0.19956	0.656069	NA	0.471	NA	3.58774
1293	3	46982737	46982737	T	C	intronic	CCDC12	NA	NA	NA	intronic	ENSG00000160799	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs4682844	0.37	0.37	0.35	0.368011	0.4125	0.4841	0.3689	0.1974	0.4325	0.41	0.5	0.36	0.18	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.085315	NA	NA	NA	NA	NA	0.297	NA	3.5875
1293	8	17945818	17945818	A	G	intergenic	ASAH1,NAT1	dist=3311;dist=82153	NA	NA	ncRNA_intronic	ENSG00000245281	NA	NA	NA	NA	NA	8p22	NA	NA	NA	NA	rs11203935	0.36	0.36	0.325	0.324681	0.4125	0.2748	0.389	0.2693	0.3149	0.42	0.3	0.43	0.27	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.682965	NA	NA	NA	NA	NA	0.239	NA	3.5875
1293	11	48997334	48997334	T	G	intergenic	OR4A47,TRIM49B	dist=486060;dist=55818	NA	NA	ncRNA_exonic	ENSG00000220948	NA	NA	NA	NA	NA	11p11.12	NA	NA	NA	NA	rs1987879	0.22	0.22	0.205	0.272564	0.1799	0.4028	0.2363	0.1188	0.4673	0.18	0.36	0.2	0.13	0.2327	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.391617	NA	0.03	NA	NA	NA	0.203	NA	3.5874
1293	2	86683901	86683901	G	C	intronic	KDM3A	NA	NA	NA	intronic	ENSG00000115548	NA	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs56347930	0.09	0.09	0.089	0.0742812	0.1392	NA	0.0677	0.1233	0.0225	0.14	NA	0.07	0.14	0.1151	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.092474	NA	NA	0.158599	0.128415	NA	0.145	NA	3.587101
1293	11	63987339	63987339	C	T	intronic	FERMT3	NA	NA	NA	intronic	ENSG00000149781	NA	NA	NA	NA	NA	11q13.1	NA	NA	NA	NA	rs11231726	0.1	0.1	0.092	0.0752796	0.1382	0.0764	0.0807	0.025	0.0736	0.15	0.09	0.09	0.03	0.1181	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.626704	NA	NA	0.156737	0.049977	NA	0.138	NA	3.586963
1293	17	39883559	39883559	G	A	intronic	HAP1	NA	NA	NA	exonic	ENSG00000173805	NA	synonymous SNV	ENSG00000173805:ENST00000310778:exon9:c.C1422T:p.S474S	NA	NA	17q21.2	NA	NA	NA	NA	rs33914436	0.44	0.44	0.384	0.461462	0.4115	0.6736	0.4856	0.1513	0.6963	0.42	0.7	0.45	0.15	0.4414	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.951271	NA	NA	0.393837	0.190195	NA	0.428	NA	3.5865963
1293	12	12618427	12618427	C	T	intronic	LOH12CR1	NA	NA	NA	intronic	ENSG00000165714	NA	NA	NA	NA	NA	12p13.2	NA	NA	NA	NA	rs3751261	0.43	0.43	0.383	0.452875	0.4135	0.7232	0.4395	0.0885	0.7168	0.41	0.72	0.45	0.1	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.570682	NA	NA	NA	NA	NA	0.304	NA	3.5865
1293	16	70601254	70601254	G	A	intronic	SF3B3	NA	NA	NA	intronic	ENSG00000189091	NA	NA	NA	NA	NA	16q22.1	NA	NA	NA	NA	rs7197262	0.44	0.44	0.427	0.471446	0.4135	0.5813	0.4135	0.2874	0.7076	0.41	0.59	0.43	0.34	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.216719	NA	NA	NA	NA	NA	0.514	NA	3.5865
1293	22	44559645	44559645	C	T	intronic	PARVB	NA	NA	NA	intronic	ENSG00000188677	NA	NA	NA	NA	NA	22q13.31	NA	NA	NA	NA	rs139079	0.34	0.34	0.326	0.371805	0.4135	0.3234	0.4236	0.2254	0.5399	0.41	0.29	0.41	0.24	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.185189	NA	NA	NA	NA	NA	0.196	NA	3.5865
1293	11	49000558	49000558	G	A	intergenic	OR4A47,TRIM49B	dist=489284;dist=52594	NA	NA	ncRNA_exonic	ENSG00000220948	NA	NA	NA	NA	NA	11p11.12	NA	NA	NA	NA	rs11040198	0.22	0.22	0.172	0.272564	0.1799	0.4028	0.2363	0.1188	0.4673	0.18	0.35	0.2	0.13	0.2338	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.728932	NA	1	NA	NA	NA	0.21	NA	3.5863
1293	12	104461937	104461937	C	T	intronic	HCFC2	NA	NA	NA	intronic	ENSG00000111727	NA	NA	NA	NA	NA	12q23.3	NA	NA	NA	NA	rs6539123	0.15	0.15	0.153	0.166933	0.1372	0.1637	0.1023	0.1815	0.227	0.14	0.16	0.12	0.18	0.1465	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.298636	NA	NA	0.130143	0.183873	NA	0.159	NA	3.586157
1293	19	17664418	17664418	G	A	UTR3	FAM129C	NM_173544:c.*46G>A	NA	NA	UTR3	ENSG00000167483	ENST00000335393:c.*46G>A,ENST00000601861:c.*46G>A,ENST00000449408:c.*46G>A,ENST00000600519:c.*3337G>A	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs34631213	0.23	0.23	0.248	0.250998	0.2624	0.128	0.255	0.3729	0.1984	0.25	0.09	0.24	0.37	0.2334	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.32424	NA	NA	0.251628	0.349523	ID=COSN165756;OCCURENCE=1(NS)	0.254	NA	3.5859054
1293	16	74709206	74709206	G	A	intronic	MLKL	NA	NA	NA	intronic	ENSG00000168404	NA	NA	NA	NA	NA	16q23.1	NA	NA	NA	NA	rs11862413	0.1	0.1	0.071	0.108826	0.1441	0.005	0.2896	0.0613	0.1155	0.15	0.0017	0.25	0.04	0.1423	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.570175	NA	NA	0.127791	0.072338	NA	0.109	NA	3.585809
1293	10	106037894	106037894	T	C	intronic	GSTO2	NA	NA	NA	intronic	ENSG00000065621	NA	NA	NA	NA	NA	10q25.1	NA	Name=p300	NA	NA	rs157077	0.52	0.52	0.561	0.534145	0.4791	0.4087	0.3401	0.8101	0.4847	0.47	0.42	0.39	0.82	0.4863	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.092137	NA	NA	0.44907	0.765774	NA	0.471	NA	3.58553
1293	4	3234828	3234828	G	T	intronic	HTT	NA	NA	NA	intronic	ENSG00000197386	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs2269478	0.4	0.4	0.334	0.390974	0.4145	0.3284	0.3991	0.4652	0.3252	0.43	0.31	0.42	0.45	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.260045	NA	NA	NA	NA	NA	0.514	NA	3.5855
1293	6	32610281	32610281	C	T	intronic	HLA-DQA1	NA	NA	NA	intronic	ENSG00000196735	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs9272777	NA	NA	NA	0.430711	0.4145	0.5288	0.4769	0.3033	0.4857	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.285487	NA	NA	NA	NA	NA	NA	NA	3.5855
1293	6	80775330	80775330	G	A	intergenic	TTK,BCKDHB	dist=23086;dist=41014	NA	NA	ncRNA_exonic	ENSG00000218418	NA	NA	NA	NA	NA	6q14.1	NA	NA	NA	NA	rs3812152	0.33	0.33	0.323	0.310903	0.4145	0.2976	0.2104	0.2458	0.3773	0.42	0.32	0.26	0.24	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.6687	NA	NA	NA	NA	NA	0.42	NA	3.5855
1293	9	77397519	77397519	T	C	intronic	TRPM6	NA	NA	NA	intronic	ENSG00000119121	NA	NA	NA	NA	NA	9q21.13	NA	NA	NA	NA	rs12339024	0.36	0.36	0.361	0.368411	0.4145	0.2817	0.2882	0.4168	0.4018	0.43	0.29	0.29	0.39	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.083949	NA	NA	NA	NA	NA	0.391	NA	3.5855
1293	12	3387521	3387521	C	G	intronic	TSPAN9	NA	NA	NA	intronic	ENSG00000011105	NA	NA	NA	NA	NA	12p13.32	NA	NA	NA	NA	rs651196	0.35	0.35	0.358	0.337061	0.4145	0.1984	0.4121	0.3646	0.3098	0.4	0.21	0.46	0.37	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.02206	NA	NA	NA	NA	NA	0.507	NA	3.5855
1293	19	5219829	5219829	T	G	intronic	PTPRS	NA	NA	NA	intronic	ENSG00000105426	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs34082224	0.4	0.4	0.355	0.396166	0.4145	0.5972	0.3199	0.2474	0.4254	0.4	0.61	0.28	0.24	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.422432	NA	NA	NA	NA	NA	0.457	NA	3.5855
1293	21	34648808	34648808	C	T	intronic	IL10RB	NA	NA	NA	intronic	ENSG00000243646,ENSG00000249624	NA	NA	NA	NA	NA	21q22.11	NA	NA	NA	NA	rs2849997	0.31	0.31	0.32	0.284145	0.4145	0.1815	0.245	0.2753	0.2955	0.41	0.22	0.26	0.29	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.805373	NA	NA	NA	NA	NA	0.558	NA	3.5855
1293	21	34649123	34649123	G	A	intronic	IL10RB	NA	NA	NA	intronic	ENSG00000243646,ENSG00000249624	NA	NA	NA	NA	NA	21q22.11	NA	NA	NA	NA	rs2285020	0.31	0.31	0.338	0.284545	0.4145	0.1815	0.245	0.2753	0.2975	0.41	0.22	0.26	0.29	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.218743	3.218743	NA	NA	NA	NA	0.558	NA	3.5855
1293	5	153788991	153788991	G	C	ncRNA_intronic	FLJ38109	NA	NA	NA	ncRNA_intronic	ENSG00000245275	NA	NA	NA	NA	NA	5q33.2	NA	NA	NA	NA	rs2112605	0.31	0.31	0.299	0.288538	0.3618	0.371	0.245	0.1596	0.3333	0.36	0.39	0.26	0.18	0.344	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.219184	NA	NA	0.375439	0.180365	NA	0.377	NA	3.5854276
1293	10	27382586	27382586	G	C	intronic	ANKRD26	NA	NA	NA	intronic	ENSG00000107890	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs2297150	0.17	0.17	0.158	0.169529	0.1521	0.2817	0.147	0.0862	0.2004	0.16	0.28	0.14	0.07	0.1436	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.715203	2.715203	NA	0.119197	0.102296	NA	0.167	NA	3.585103
1294	15	79031485	79031485	G	A	intergenic	CHRNB4,LOC646938	dist=97898;dist=12894	NA	NA	intergenic	ENSG00000261303,ENSG00000238166	dist=3648;dist=12964	NA	NA	Score=559;Name=lod=249	NA	15q25.1	NA	NA	NA	NA	rs12907536	0.4	0.4	0.377	0.364417	0.7485	0.1349	0.4035	0.1089	0.5235	0.74	0.12	0.47	0.14	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.853761	NA	NA	NA	NA	NA	0.529	NA	3.5848334
1294	2	219618708	219618708	T	C	intronic	TTLL4	NA	NA	NA	intronic	ENSG00000135912	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs55900247	0.23	0.23	0.208	0.199681	0.4155	0.0556	0.3386	0.0234	0.2658	0.42	0.06	0.33	0.05	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.421529	NA	NA	NA	NA	NA	0.319	NA	3.5845
1294	12	3387449	3387449	A	G	intronic	TSPAN9	NA	NA	NA	intronic	ENSG00000011105	NA	NA	NA	NA	NA	12p13.32	NA	NA	NA	NA	rs571206	0.35	0.35	0.357	0.33726	0.4155	0.1984	0.4121	0.3646	0.3098	0.4	0.21	0.46	0.37	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.363843	NA	NA	NA	NA	NA	0.507	NA	3.5845
1294	16	1400693	1400693	C	T	intronic	TSR3	NA	NA	NA	intronic	ENSG00000007520	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs2294605	0.38	0.38	0.334	0.406749	0.4155	0.2252	0.5836	0.4334	0.4233	0.42	0.18	0.54	0.42	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.263251	NA	NA	NA	NA	NA	0.355	NA	3.5845
1294	17	39620262	39620262	G	A	intronic	KRT32	NA	NA	NA	intronic	ENSG00000108759	NA	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs11653427	0.33	0.33	0.325	0.290335	0.4155	0.3185	0.3746	0.1626	0.2454	0.42	0.36	0.31	0.17	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.643115	NA	NA	NA	NA	NA	0.333	NA	3.5845
1294	19	33444479	33444479	C	T	intronic	CEP89	NA	NA	NA	intronic	ENSG00000121289	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs79480383	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4155	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.528506	NA	NA	NA	NA	NA	NA	NA	3.5845
1294	22	47564781	47564781	C	G	intronic	TBC1D22A	NA	NA	NA	intronic	ENSG00000054611	NA	NA	NA	NA	NA	22q13.31	NA	NA	NA	NA	rs5767559	0.46	0.46	0.396	0.40655	0.4155	0.7034	0.5303	0.1505	0.3497	0.42	0.72	0.51	0.16	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.06965	NA	NA	NA	NA	NA	0.297	NA	3.5845
1294	15	50822178	50822178	T	C	intronic	USP50	NA	NA	NA	intronic	ENSG00000170236	NA	NA	NA	NA	NA	15q21.2	NA	NA	NA	NA	rs62019151	0.15	0.15	0.135	0.165735	0.2177	0.002	0.2637	0.1717	0.2035	0.2	NA	0.26	0.15	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.217825	NA	NA	0.198095	0.17268	NA	0.181	NA	3.584205
1294	22	50507019	50507019	G	A	intronic	MLC1	NA	NA	NA	intronic	ENSG00000100427	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs11568179	0.11	0.11	0.089	0.132388	0.1332	0.0952	0.1758	0.0598	0.2372	0.13	0.1	0.16	0.08	0.1399	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.949763	NA	NA	0.142824	0.077394	NA	0.072	NA	3.584076
1294	8	36664834	36664834	G	A	intronic	KCNU1	NA	NA	NA	intronic	ENSG00000215262	NA	NA	NA	NA	NA	8p11.23	NA	NA	NA	NA	rs1079678	0.09	0.09	0.087	0.061901	0.2117	NA	0.072	0.0159	0.0266	0.22	NA	0.07	0.02	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.1909	NA	NA	0.204274	0.041908	NA	0.072	NA	3.584026
1294	10	124917238	124917238	T	C	intronic	BUB3	NA	NA	NA	intronic	ENSG00000154473	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs2304550	0.23	0.23	0.227	0.240615	0.1183	0.374	0.1369	0.3328	0.1779	0.12	0.4	0.14	0.29	0.1667	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.139534	NA	NA	0.131047	0.284612	NA	0.188	NA	3.583953
1294	3	4403817	4403817	T	A	UTR3	SUMF1	NM_001164674:c.*11A>T,NM_001164675:c.*11A>T,NM_182760:c.*11A>T	NA	NA	UTR3	ENSG00000144455	ENST00000272902:c.*11A>T,ENST00000383843:c.*11A>T,ENST00000458465:c.*11A>T,ENST00000405420:c.*11A>T	NA	NA	NA	NA	3p26.1	NA	NA	NA	NA	rs2633851	0.64	0.64	0.667	0.726837	0.5895	0.7609	0.6844	0.7995	0.7648	0.51	0.7	0.62	0.77	0.6334	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.339079	1.339079	NA	0.526512	0.751702	NA	0.21	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000082713.1;CLNDSDB=.;CLNDSDBID=.	3.5839214
1294	12	104459905	104459905	T	G	intronic	HCFC2	NA	NA	NA	intronic	ENSG00000111727	NA	NA	NA	NA	NA	12q23.3	NA	NA	NA	NA	rs35879815	0.15	0.15	0.154	0.157348	0.1382	0.1696	0.1023	0.1641	0.1943	0.14	0.17	0.12	0.16	0.146	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000922	NA	NA	0.131977	0.171357	NA	0.138	NA	3.583823
1294	4	70599073	70599073	C	T	intronic	SULT1B1	NA	NA	NA	intronic	ENSG00000173597	NA	NA	NA	NA	NA	4q13.3	NA	NA	NA	NA	rs1847366	0.45	0.45	0.415	0.44389	0.4165	0.5992	0.5159	0.2489	0.5245	0.41	0.63	0.5	0.27	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.146291	NA	NA	NA	NA	NA	0.377	NA	3.5835
1294	7	133580545	133580545	A	G	intronic	EXOC4	NA	NA	NA	intronic	ENSG00000131558	NA	NA	NA	NA	NA	7q33	NA	NA	NA	NA	rs2042455	0.49	0.49	0.518	0.538339	0.4165	0.4623	0.3184	0.7262	0.6442	0.42	0.5	0.37	0.69	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.482126	NA	NA	NA	NA	NA	0.5	NA	3.5835
1294	9	21816637	21816637	T	C	intronic	MTAP	NA	NA	NA	intronic	ENSG00000099810,ENSG00000264545	NA	NA	NA	NA	NA	9p21.3	NA	NA	NA	NA	rs10114559	0.36	0.36	0.318	0.32508	0.4165	0.4395	0.4539	0.1694	0.2321	0.41	0.4	0.43	0.19	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.171635	NA	NA	NA	NA	ID=COSN168491;OCCURENCE=1(large_intestine)	0.319	NA	3.5835
1294	9	37769811	37769811	T	G	intronic	TRMT10B	NA	NA	NA	intronic	ENSG00000107371,ENSG00000165275,ENSG00000255872	NA	NA	NA	NA	NA	9p13.2	NA	NA	NA	NA	rs10973531	0.33	0.33	0.301	0.330471	0.4165	0.1726	0.389	0.2973	0.408	0.43	0.17	0.42	0.3	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.469195	NA	NA	NA	NA	NA	0.37	NA	3.5835
1294	9	112020668	112020668	T	C	intronic	EPB41L4B	NA	NA	NA	intronic	ENSG00000095203	NA	NA	NA	NA	NA	9q31.3	NA	NA	NA	NA	rs745388	0.38	0.38	0.338	0.341853	0.4165	0.2887	0.5058	0.2496	0.3282	0.42	0.31	0.5	0.29	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.639314	NA	NA	NA	NA	NA	0.312	NA	3.5835
1294	17	6350727	6350727	C	T	intronic	FAM64A	NA	NA	NA	intronic	ENSG00000129195	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs12947546	0.3	0.3	0.294	0.284345	0.4165	0.2321	0.3602	0.1611	0.3149	0.43	0.21	0.38	0.16	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.892159	NA	NA	NA	NA	NA	0.275	NA	3.5835
1294	3	151545323	151545323	T	G	intronic	AADAC	NA	NA	NA	ncRNA_intronic	ENSG00000242908	NA	NA	NA	NA	NA	3q25.1	NA	NA	NA	NA	rs62272918	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.7499	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.803511	NA	NA	NA	NA	NA	NA	NA	3.5834333
1294	7	76255032	76255032	A	G	ncRNA_intronic	LOC100133091	NA	NA	NA	ncRNA_intronic	ENSG00000205485	NA	NA	NA	NA	NA	7q11.23	NA	NA	NA	NA	rs2527936	0.4	0.4	0.423	0.403355	0.3489	0.1984	0.2954	0.7247	0.3129	0.36	0.23	0.31	0.74	0.3619	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.430682	NA	NA	0.37314	0.678393	NA	0.5	NA	3.5827266
1294	1	201042618	201042618	G	A	intronic	CACNA1S	NA	NA	NA	intronic	ENSG00000081248	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs9333652	0.54	0.54	0.517	0.591254	0.4175	0.9633	0.5216	0.3313	0.7873	0.42	0.95	0.46	0.33	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.092765	NA	NA	NA	NA	NA	0.391	NA	3.5825
1294	3	1427204	1427204	T	A	intronic	CNTN6	NA	NA	NA	intronic	ENSG00000134115	NA	NA	NA	NA	NA	3p26.3	NA	NA	NA	NA	rs3902441	0.5	0.5	0.477	0.500399	0.4175	0.6339	0.5447	0.41	0.5389	0.42	0.62	0.51	0.46	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.111977	NA	NA	NA	NA	NA	0.5	NA	3.5825
1294	9	106860969	106860969	T	C	intronic	SMC2	NA	NA	NA	intronic	ENSG00000136824	NA	NA	NA	NA	NA	9q31.1	NA	NA	NA	NA	rs10991107	0.31	0.31	0.295	0.325679	0.4175	0.1746	0.3141	0.3548	0.3558	0.4	0.14	0.34	0.36	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.345105	1.345105	NA	NA	NA	NA	0.413	NA	3.5825
1294	13	99056297	99056297	A	C	intronic	FARP1	NA	NA	NA	intronic	ENSG00000152767	NA	NA	NA	NA	NA	13q32.2	NA	NA	NA	NA	rs41279116	0.31	0.31	0.297	0.296326	0.4175	0.2083	0.2464	0.3283	0.2546	0.39	0.21	0.28	0.31	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.150875	NA	NA	NA	NA	NA	0.297	NA	3.5825
1294	14	91681623	91681623	C	T	intronic	C14orf159	NA	NA	NA	intronic	ENSG00000133943	NA	NA	NA	NA	NA	14q32.11	NA	NA	NA	NA	rs11622036	0.48	0.48	0.487	0.545327	0.4175	0.3333	0.3833	0.8601	0.5849	0.43	0.31	0.43	0.81	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.155915	NA	NA	NA	NA	NA	0.58	NA	3.5825
1294	15	33990294	33990294	G	A	intronic	RYR3	NA	NA	NA	intronic	ENSG00000198838	NA	NA	NA	NA	NA	15q14	NA	NA	NA	NA	rs1390161	0.36	0.36	0.346	0.36861	0.4175	0.629	0.245	0.0688	0.5429	0.42	0.6	0.26	0.06	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.785053	NA	NA	NA	NA	NA	0.377	NA	3.5825
1294	19	55142861	55142861	C	G	intronic	LILRB1	NA	NA	NA	intronic	ENSG00000104972	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs1985500	0.54	0.54	0.512	0.535543	0.4175	0.6111	0.5447	0.6694	0.3916	0.42	0.61	0.51	0.68	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.277357	NA	NA	NA	NA	NA	0.609	NA	3.5825
1294	19	56487430	56487430	G	A	intronic	NLRP8	NA	NA	NA	intronic	ENSG00000179709	NA	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs306483	0.29	0.29	0.265	0.299321	0.4175	0.131	0.4135	0.1891	0.4192	0.43	0.14	0.39	0.2	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.245443	NA	NA	NA	NA	NA	0.181	NA	3.5825
1294	20	8639443	8639443	T	C	intronic	PLCB1	NA	NA	NA	intronic	ENSG00000182621	NA	NA	NA	NA	NA	20p12.3	NA	NA	NA	NA	rs2076640	0.39	0.39	0.366	0.375599	0.4175	0.3065	0.4625	0.4387	0.2566	0.43	0.26	0.45	0.45	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.599777	NA	NA	NA	NA	NA	0.384	NA	3.5825
1294	17	30321762	30321762	G	C	intronic	SUZ12	NA	NA	NA	intronic	ENSG00000178691	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs473356	0.08	0.08	0.08	0.08127	0.1491	NA	0.0821	0.0356	0.1564	0.15	NA	0.08	0.04	0.1219	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.201056	NA	NA	0.146977	0.052202	NA	0.145	NA	3.582023
1294	10	124050575	124050575	G	A	intronic	BTBD16	NA	NA	NA	intronic	ENSG00000138152	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs11592545	0.16	0.16	0.173	0.145767	0.1382	0.2629	0.1009	0.0688	0.1687	0.13	0.29	0.12	0.08	0.1405	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.151566	NA	NA	0.139535	0.073763	NA	0.174	NA	3.581765
1294	2	113308516	113308516	T	A	exonic	POLR1B	NA	synonymous SNV	POLR1B:NM_001137604:exon4:c.T531A:p.T177T,POLR1B:NM_019014:exon5:c.T699A:p.T233T	exonic	ENSG00000125630	NA	synonymous SNV	ENSG00000125630:ENST00000537335:exon2:c.T66A:p.T22T,ENSG00000125630:ENST00000417433:exon4:c.T531A:p.T177T,ENSG00000125630:ENST00000263331:exon5:c.T699A:p.T233T,ENSG00000125630:ENST00000409894:exon5:c.T699A:p.T233T,ENSG00000125630:ENST00000541869:exon6:c.T813A:p.T271T	NA	NA	2q13	NA	NA	NA	NA	rs2304555	0.54	0.54	0.541	0.554113	0.6938	0.4038	0.5562	0.5015	0.635	0.69	0.35	0.6	0.5	0.6505	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.101831	NA	NA	0.740698	0.556741	NA	0.638	NA	3.5816686
1294	18	47480898	47480898	T	C	intronic	MYO5B	NA	NA	NA	intronic	ENSG00000167306	NA	NA	NA	NA	NA	18q21.1	NA	NA	NA	NA	rs1557359	0.35	0.35	0.344	0.395367	0.4185	0.2788	0.4308	0.3162	0.5736	0.42	0.28	0.4	0.3	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.239291	NA	NA	NA	NA	NA	0.471	NA	3.5815
1294	1	176934389	176934389	T	A	intronic	ASTN1	NA	NA	NA	intronic	ENSG00000152092	NA	NA	NA	NA	NA	1q25.2	NA	NA	NA	NA	rs12565733	0.13	0.13	0.119	0.121605	0.1243	0.1984	0.2248	0.0182	0.1063	0.13	0.18	0.2	0.03	0.1464	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.422033	NA	NA	0.148372	0.037903	NA	0.087	NA	3.580928
1294	17	9760716	9760716	G	T	intronic	GLP2R	NA	NA	NA	intronic	ENSG00000065325	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs2293100	0.25	0.25	0.233	0.277556	0.1252	0.2867	0.268	0.3797	0.2935	0.11	0.28	0.23	0.42	0.1891	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.225107	NA	NA	0.105	0.344984	NA	0.29	NA	3.5807
1294	12	48144243	48144243	A	C	intronic	RAPGEF3	NA	NA	NA	intronic	ENSG00000079337	NA	NA	NA	NA	NA	12q13.11	NA	Name=c-Myc	Name=9	NA	rs757279	0.83	0.83	0.803	0.809505	0.7942	0.9494	0.8703	0.7617	0.7025	0.78	0.93	0.9	0.74	0.81	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.415565	NA	NA	0.815147	0.777929	NA	0.797	NA	3.580653
1294	3	97941104	97941104	A	G	intergenic	OR5H15,OR5H6	dist=52619;dist=42025	NA	NA	ncRNA_exonic	ENSG00000248507	NA	NA	NA	NA	NA	3q11.2	NA	NA	NA	NA	rs13063850	0.26	0.26	0.256	0.257987	0.4195	0.0387	0.2392	0.2791	0.3027	0.41	0.03	0.28	0.28	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.068535	NA	NA	NA	NA	NA	0.254	NA	3.5805
1294	20	1702792	1702792	G	A	intergenic	SIRPG,LOC100289473	dist=64367;dist=51219	NA	NA	ncRNA_exonic	ENSG00000234282	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs202510	0.31	0.31	0.299	0.308906	0.4195	0.2619	0.4755	0.146	0.3456	0.41	0.27	0.4	0.14	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.680486	NA	NA	NA	NA	NA	0.377	NA	3.5805
1294	1	163117351	163117351	G	T	intronic	RGS5	NA	NA	NA	intronic	ENSG00000143248	NA	NA	NA	NA	NA	1q23.3	NA	NA	NA	NA	rs3768560	0.39	0.39	0.327	0.375799	0.4195	0.4563	0.5216	0.1664	0.4274	0.42	0.47	0.49	0.17	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.520403	NA	NA	NA	NA	NA	0.428	NA	3.5805
1294	16	53321734	53321734	T	C	intronic	CHD9	NA	NA	NA	intronic	ENSG00000177200	NA	NA	NA	NA	NA	16q12.2	NA	NA	NA	NA	rs3815548	0.41	0.41	0.419	0.407348	0.4195	0.4444	0.2262	0.3268	0.5941	0.43	0.49	0.28	0.39	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.86878	NA	NA	NA	NA	NA	0.37	NA	3.5805
1294	20	31374520	31374520	A	G	intronic	DNMT3B	NA	NA	NA	intronic	ENSG00000088305	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs2424914	0.73	0.73	0.727	0.767173	0.4195	0.9931	0.6643	0.9539	0.7127	0.43	0.99	0.64	0.93	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.790354	NA	NA	NA	NA	NA	0.623	NA	3.5805
1294	12	7014962	7014962	A	G	intronic	LRRC23	NA	NA	NA	intronic	ENSG00000010626	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs2071071	0.35	0.35	NA	0.28155	0.2048	0.2927	0.2133	0.4939	0.1104	0.22	0.33	0.27	0.63	0.2148	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.819094	NA	NA	NA	NA	NA	0.304	NA	3.5804
1294	19	49409004	49409004	T	C	intronic	NUCB1	NA	NA	NA	intronic	ENSG00000104805	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs73063524	0.07	0.07	0.05	0.0628994	0.1421	0.001	0.0663	0.0386	0.0757	0.14	0.0017	0.07	0.03	0.112	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.491909	NA	NA	0.165581	0.059691	NA	0.13	NA	3.580319
1294	1	32157009	32157009	G	T	intronic	COL16A1	NA	NA	NA	intronic	ENSG00000084636	NA	NA	NA	NA	NA	1p35.2	NA	NA	NA	NA	rs2297679	0.15	0.15	0.121	0.210663	0.1083	0.1528	0.3588	0.1097	0.407	0.11	0.17	0.27	0.09	0.1895	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.783303	1.783303	NA	0.12196	0.126053	NA	0.159	NA	3.58024
1294	6	70976538	70976538	A	G	intronic	COL9A1	NA	NA	NA	intronic	ENSG00000112280	NA	NA	NA	NA	NA	6q13	NA	NA	NA	NA	rs883708	0.18	0.18	0.195	0.159345	0.2147	0.12	0.111	0.2201	0.0951	0.22	0.11	0.13	0.24	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.153434	NA	NA	0.205217	0.217486	NA	0.232	NA	3.580083
1294	9	4561421	4561421	T	C	intronic	SLC1A1	NA	NA	NA	intronic	ENSG00000106686,ENSG00000106688	NA	NA	NA	NA	NA	9p24.2	NA	NA	NA	NA	rs72694015	0.21	0.21	0.17	0.173722	0.1461	0.4236	0.2176	0.0083	0.137	0.15	0.43	0.24	0.01	0.156	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.570061	NA	NA	0.117907	0.031321	NA	0.159	NA	3.579993
1294	14	20871846	20871846	A	G	intronic	TEP1	NA	NA	NA	intronic	ENSG00000129566	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs55790286	0.09	0.09	0.085	0.071885	0.1392	0.0655	0.0519	0.0522	0.0501	0.14	0.06	0.05	0.06	0.1223	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.373807	1.373807	NA	0.158642	0.065395	NA	0.109	NA	3.579858
1294	19	33490480	33490480	G	A	intronic	RHPN2	NA	NA	NA	intronic	ENSG00000131941	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs74603434	NA	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4204	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.308064	1.308064	NA	NA	NA	NA	0.007	NA	3.5796
1294	5	151239290	151239290	G	A	intronic	GLRA1	NA	NA	NA	intronic	ENSG00000145888	NA	NA	NA	NA	NA	5q33.1	NA	NA	NA	NA	rs7729026	0.36	0.36	0.328	0.390575	0.4205	0.3304	0.3718	0.3714	0.4611	0.43	0.3	0.33	0.33	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.915544	NA	NA	NA	NA	NA	0.37	NA	3.5795
1294	6	49805985	49805985	T	C	intronic	CRISP1	NA	NA	NA	intronic	ENSG00000124812	NA	NA	NA	NA	NA	6p12.3	NA	NA	NA	NA	rs12200099	0.25	0.25	0.236	0.215256	0.4205	0.0407	0.2435	0.211	0.1697	0.42	0.03	0.26	0.23	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.373556	NA	NA	NA	NA	NA	0.29	NA	3.5795
1294	7	142216436	142216436	G	T	intergenic	LOC730441,MTRNR2L6	dist=244368;dist=157695	NA	NA	ncRNA_exonic	ENSG00000244661	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs17231	0.27	0.27	0.25	0.221446	0.4205	0.1994	0.3213	0.0809	0.1585	0.43	0.15	0.35	0.1	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.742559	NA	NA	NA	NA	NA	0.232	NA	3.5795
1294	9	93627484	93627484	C	T	intronic	SYK	NA	NA	NA	intronic	ENSG00000165025	NA	NA	NA	NA	NA	9q22.2	NA	NA	NA	NA	rs4744516	0.39	0.39	0.376	0.364417	0.4205	0.2143	0.5879	0.4539	0.182	0.4	0.21	0.55	0.47	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.300987	NA	NA	NA	NA	NA	0.319	NA	3.5795
1294	17	706862	706862	G	C	intronic	NXN	NA	NA	NA	intronic	ENSG00000167693	NA	NA	NA	NA	NA	17p13.3	NA	NA	NA	NA	rs598974	0.46	0.46	0.426	0.473243	0.4205	0.3661	0.5274	0.6581	0.3497	0.41	0.33	0.51	0.64	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.49178	NA	NA	NA	NA	NA	0.493	NA	3.5795
1294	17	61995030	61995030	A	T	intronic	GH1	NA	NA	NA	intronic	ENSG00000204414,ENSG00000259384	NA	NA	NA	NA	NA	17q23.3	NA	NA	NA	NA	rs2665802	0.33	0.33	0.285	0.28135	0.4205	0.4296	0.3285	0.0598	0.2515	0.42	0.39	0.38	0.08	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.699323	2.699323	NA	NA	NA	NA	0.362	NA	3.5795
1294	20	31389009	31389009	C	T	intronic	DNMT3B	NA	NA	NA	intronic	ENSG00000088305	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs2065576	0.71	0.71	0.702	0.742612	0.4205	0.9931	0.6542	0.8661	0.7117	0.43	0.99	0.63	0.85	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.492331	NA	NA	NA	NA	NA	0.58	NA	3.5795
1294	5	153065746	153065746	A	G	intronic	GRIA1	NA	NA	NA	intronic	ENSG00000155511	NA	NA	NA	NA	NA	5q33.2	NA	NA	NA	NA	rs10035262	0.13	0.13	0.121	0.150958	0.1312	0.005	0.1311	0.2579	0.1912	0.13	0.01	0.14	0.27	0.1475	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.545512	NA	NA	0.142209	0.243985	NA	0.152	NA	3.579091
1294	19	5215472	5215472	C	T	intronic	PTPRS	NA	NA	NA	intronic	ENSG00000105426	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs10407635	0.15	0.15	0.174	0.167332	0.1382	NA	0.111	0.3949	0.1022	0.13	NA	0.1	0.41	0.1417	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.671168	1.671168	NA	0.141279	0.346346	NA	0.08	NA	3.578821
1294	2	103063520	103063520	G	A	intronic	IL18RAP	NA	NA	NA	intronic	ENSG00000115607	NA	NA	NA	NA	NA	2q12.1	NA	NA	NA	NA	rs11465723	0.09	0.09	0.074	0.0766773	0.1541	0.0129	0.0965	0.0598	0.0716	0.15	0.02	0.11	0.07	0.1123	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.045511	NA	NA	0.155	0.068316	NA	0.072	NA	3.5786
1294	9	327957	327957	T	G	intronic	DOCK8	NA	NA	NA	intronic	ENSG00000107099	NA	NA	NA	NA	NA	9p24.3	NA	NA	NA	NA	rs2296826	0.43	0.43	0.397	0.439896	0.4215	0.7004	0.3919	0.1914	0.5603	0.42	0.68	0.37	0.22	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.042889	NA	NA	NA	NA	NA	0.283	NA	3.5785
1294	11	61671956	61671956	A	G	intronic	RAB3IL1	NA	NA	NA	intronic	ENSG00000167994	NA	NA	NA	NA	NA	11q12.2	NA	NA	NA	NA	rs174472	0.55	0.55	0.472	0.537939	0.4215	0.8542	0.5922	0.2481	0.6851	0.44	0.92	0.57	0.26	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.016288	NA	NA	NA	NA	NA	0.37	NA	3.5785
1294	12	125626535	125626535	A	G	intronic	AACS	NA	NA	NA	intronic	ENSG00000081760	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs3751181	0.5	0.5	0.457	0.481829	0.4215	0.6696	0.3919	0.5272	0.3528	0.42	0.62	0.44	0.51	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.494586	NA	NA	NA	NA	NA	0.449	NA	3.5785
1294	17	9830171	9830171	C	T	intronic	GAS7	NA	NA	NA	intronic	ENSG00000007237	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs56199323	0.31	0.31	0.312	0.297923	0.4215	0.1548	0.2781	0.3396	0.2761	0.43	0.13	0.33	0.35	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.235401	NA	NA	NA	NA	NA	0.391	NA	3.5785
1294	4	84243549	84243549	A	G	intronic	HPSE	NA	NA	NA	intronic	ENSG00000173083	NA	NA	NA	NA	NA	4q21.23	NA	NA	NA	NA	rs4328905	0.25	0.25	0.25	0.267173	0.1153	0.4177	0.1873	0.295	0.2873	0.11	0.44	0.17	0.32	0.1931	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.155071	NA	NA	0.11314	0.278938	NA	0.196	NA	3.57846
1294	14	20813289	20813289	G	A	intronic	PARP2	NA	NA	NA	ncRNA_intronic	ENSG00000254846	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs2297616	0.18	0.18	0.148	0.205471	0.2565	0.1845	0.1988	0.0446	0.3967	0.25	0.18	0.2	0.06	0.2459	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.455128	NA	NA	0.252768	0.080466	NA	0.196	NA	3.5781653
1294	16	66613841	66613841	G	C	intronic	CMTM2	NA	NA	NA	intronic	ENSG00000140932	NA	NA	NA	NA	NA	16q21	NA	NA	NA	NA	rs2290183	0.2	0.2	0.179	0.208267	0.1332	0.2937	0.2363	0.1664	0.2342	0.13	0.29	0.22	0.16	0.1745	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.748337	NA	NA	0.114186	0.180373	NA	0.167	NA	3.578114
1294	5	149221992	149221992	C	T	intronic	PPARGC1B	NA	NA	NA	intronic	ENSG00000155846	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs26126	0.09	0.09	0.092	0.120807	0.1412	0.0129	0.0692	0.146	0.2137	0.14	0.02	0.07	0.12	0.1442	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.160133	NA	NA	0.136639	0.150716	ID=COSN167601;OCCURENCE=1(large_intestine)	0.109	NA	3.577961
1294	11	46393757	46393757	C	T	intronic	DGKZ	NA	NA	NA	intronic	ENSG00000149091	NA	NA	NA	NA	NA	11p11.2	NA	NA	NA	NA	rs3740976	0.1	0.1	0.092	0.103435	0.1352	0.0754	0.0879	0.0378	0.1994	0.14	0.09	0.08	0.05	0.1682	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.692737	NA	NA	0.119036	0.045704	NA	0.087	NA	3.577564
1294	4	168004426	168004426	C	T	intronic	SPOCK3	NA	NA	NA	intronic	ENSG00000196104	NA	NA	NA	NA	NA	4q32.3	NA	NA	NA	NA	rs13117458	0.1	0.1	0.097	0.0966454	0.1441	0.13	0.1124	0.0023	0.1299	0.14	0.13	0.1	0.0041	0.1347	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.429705	NA	NA	0.143667	0.026042	ID=COSN167368;OCCURENCE=1(large_intestine)	0.058	NA	3.577533
1294	2	71191777	71191777	C	T	intronic	ATP6V1B1	NA	NA	NA	intronic	ENSG00000116039,ENSG00000258881	NA	NA	NA	NA	NA	2p13.3	NA	NA	NA	NA	rs2270263	0.43	0.43	0.407	0.415136	0.4225	0.6548	0.4827	0.1437	0.4796	0.42	0.63	0.47	0.16	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.127294	NA	NA	NA	NA	NA	0.449	NA	3.5775
1294	12	18237688	18237688	C	A	intronic	RERGL	NA	NA	NA	intronic	ENSG00000111404	NA	NA	NA	NA	NA	12p12.3	NA	NA	NA	NA	rs6486881	0.45	0.45	0.452	0.450679	0.4225	0.5734	0.3905	0.441	0.409	0.4	0.6	0.41	0.4	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.401317	NA	NA	NA	NA	NA	0.478	NA	3.5775
1294	19	3198695	3198695	C	G	intronic	NCLN	NA	NA	NA	intronic	ENSG00000125912	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs311620	0.42	0.42	0.399	0.411342	0.4225	0.4891	0.4611	0.3018	0.4325	0.42	0.49	0.44	0.3	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.905377	NA	NA	NA	NA	NA	0.391	NA	3.5775
1294	13	39450139	39450139	A	C	intronic	FREM2	NA	NA	NA	intronic	ENSG00000150893	NA	NA	NA	NA	NA	13q13.3	NA	NA	NA	NA	rs1945510	0.18	0.18	0.172	0.201078	0.1173	0.0972	0.3314	0.32	0.1411	0.1	0.11	0.28	0.32	0.1725	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.453691	NA	NA	0.132791	0.296868	NA	0.174	NA	3.577409
1294	12	105446552	105446552	T	C	intronic	ALDH1L2	NA	NA	NA	intronic	ENSG00000136010	NA	NA	NA	NA	NA	12q23.3	NA	NA	Name=2	NA	rs56188643	0.36	0.36	0.327	0.360623	0.501	0.3899	0.3559	0.1362	0.4928	0.5	0.37	0.4	0.13	0.4364	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.983845	NA	NA	0.485233	0.192919	ID=COSN164358;OCCURENCE=1(breast)	0.435	NA	3.577367
1294	1	21896925	21896925	C	T	intronic	ALPL	NA	NA	NA	intronic	ENSG00000162551	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs2275375	0.34	0.34	0.34	0.323083	0.2167	0.4702	0.3285	0.3147	0.2883	0.22	0.52	0.31	0.35	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.016493	NA	NA	0.206474	0.311416	NA	0.326	NA	3.576826
1294	1	59465642	59465642	G	A	intergenic	LOC100131060,HSD52	dist=100258;dist=131966	NA	NA	ncRNA_exonic	ENSG00000228121	NA	NA	NA	NA	NA	1p32.1	NA	NA	NA	NA	rs2716146	0.41	0.41	0.433	0.417732	0.4235	0.2133	0.3847	0.6884	0.2802	0.42	0.2	0.39	0.67	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.532459	NA	NA	NA	NA	NA	0.428	NA	3.5765
1294	5	32419849	32419849	T	C	intronic	ZFR	NA	NA	NA	intronic	ENSG00000056097	NA	NA	NA	NA	NA	5p13.3	NA	NA	NA	NA	rs324428	0.44	0.44	0.391	0.436302	0.4235	0.5565	0.4409	0.3411	0.4509	0.43	0.58	0.44	0.32	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.808419	NA	NA	NA	NA	NA	0.391	NA	3.5765
1294	7	65976634	65976634	A	G	intergenic	LINC00174,LOC493754	dist=111239;dist=41919	NA	NA	ncRNA_exonic	ENSG00000234500	NA	NA	NA	NA	NA	7q11.21	NA	NA	NA	NA	rs6970860	0.44	0.44	0.351	0.46266	0.4235	0.623	0.4496	0.2995	0.5675	0.42	0.62	0.42	0.27	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.268832	NA	NA	NA	NA	NA	0.42	NA	3.5765
1294	11	60697905	60697905	T	C	intronic	TMEM132A	NA	NA	NA	intronic	ENSG00000006118	NA	NA	NA	NA	NA	11q12.2	NA	NA	NA	NA	rs4939480	0.41	0.41	0.413	0.417732	0.4235	0.3274	0.4452	0.4493	0.4427	0.42	0.34	0.45	0.45	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.568693	NA	NA	NA	NA	NA	0.486	NA	3.5765
1294	12	4870363	4870363	G	A	intronic	GALNT8	NA	NA	NA	intronic	ENSG00000130035	NA	NA	NA	NA	NA	12p13.32	NA	NA	NA	NA	rs2191157	0.37	0.37	0.376	0.327077	0.4235	0.3611	0.4265	0.2352	0.2464	0.42	0.39	0.42	0.25	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.023677	NA	NA	NA	NA	NA	0.37	NA	3.5765
1294	17	61564281	61564281	T	C	intronic	ACE	NA	NA	NA	intronic	ENSG00000159640,ENSG00000264813	NA	NA	NA	NA	NA	17q23.3	NA	NA	NA	NA	rs4332	0.52	0.52	0.474	0.529752	0.4235	0.6746	0.5692	0.413	0.6196	0.43	0.69	0.56	0.43	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.526983	NA	NA	NA	NA	NA	0.522	NA	3.5765
1294	22	16953727	16953727	A	G	intergenic	OR11H1,CCT8L2	dist=503923;dist=117921	NA	NA	ncRNA_intronic	ENSG00000227367	NA	NA	NA	NA	NA	22q11.1	NA	NA	NA	NA	rs11089179	0.26	0.26	0.21	0.276158	0.4235	0.2619	0.3372	0.0991	0.3354	0.38	0.23	0.31	0.07	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.627975	NA	NA	NA	NA	NA	0.007	NA	3.5765
1294	22	20295420	20295420	G	T	intergenic	RTN4R,DGCR6L	dist=39604;dist=6341	NA	NA	ncRNA_exonic	ENSG00000161132	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs4425183	0.29	0.29	0.304	0.256789	0.4235	0.2282	0.2205	0.1558	0.2771	0.45	0.26	0.23	0.14	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.895737	NA	NA	NA	NA	ID=COSN166701;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.217	NA	3.5765
1294	1	37282884	37282884	C	T	intronic	GRIK3	NA	NA	NA	intronic	ENSG00000163873	NA	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	rs3012032	0.16	0.16	0.159	0.178115	0.1332	0.0635	0.1311	0.3707	0.1155	0.12	0.04	0.15	0.35	0.1459	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.02853	NA	NA	0.144535	0.308443	ID=COSM146469;OCCURENCE=1(stomach)	0.159	NA	3.576365
1294	15	85488298	85488298	G	A	intronic	SLC28A1	NA	NA	NA	intronic	ENSG00000156222	NA	NA	NA	NA	NA	15q25.3	NA	NA	NA	NA	rs62021453	0.1	0.1	0.113	0.0876597	0.2227	0.001	0.1023	0.0121	0.1299	0.23	0.0017	0.1	0.02	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.858076	NA	NA	0.200943	0.041908	NA	0.058	NA	3.576357
1294	7	48285664	48285664	A	C	intronic	ABCA13	NA	NA	NA	intronic	ENSG00000179869	NA	NA	NA	NA	NA	7p12.3	NA	NA	NA	NA	rs1405127	0.22	0.22	0.221	0.240016	0.1252	0.1508	0.2017	0.438	0.2096	0.12	0.18	0.19	0.44	0.18	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.170486	NA	NA	0.118482	0.40528	NA	0.232	NA	3.576318
1294	7	6204999	6204999	A	C	exonic	CYTH3	NA	synonymous SNV	CYTH3:NM_004227:exon12:c.T1032G:p.T344T	exonic	ENSG00000008256	NA	synonymous SNV	ENSG00000008256:ENST00000396741:exon7:c.T777G:p.T259T,ENSG00000008256:ENST00000350796:exon12:c.T1032G:p.T344T	NA	NA	7p22.1	NA	NA	NA	NA	rs2301910	0.8	0.8	0.797	0.795128	0.7087	0.8502	0.6974	0.938	0.7035	0.7	0.88	0.69	0.92	0.7063	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.191244	NA	NA	0.675349	0.886013	NA	0.667	NA	3.5763176
1294	19	10794793	10794793	C	T	intronic	ILF3	NA	NA	NA	UTR3	ENSG00000129351	ENST00000592763:c.*121C>T	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs892087	0.52	0.52	0.524	0.572484	0.5905	0.37	0.6614	0.6248	0.6288	0.59	0.28	0.64	0.62	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.858573	NA	NA	NA	NA	NA	0.5	NA	3.5761667
1294	6	348051	348051	A	G	intronic	DUSP22	NA	NA	NA	intronic	ENSG00000112679	NA	NA	NA	NA	NA	6p25.3	NA	NA	NA	NA	rs1877172	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.108448	NA	NA	0.423908	0.461758	NA	0.486	NA	3.576092
1294	4	142640637	142640637	A	G	intronic	IL15	NA	NA	NA	intronic	ENSG00000164136	NA	NA	NA	Score=439;Name=lod=81	NA	4q31.21	NA	NA	NA	NA	rs2857261	0.46	0.46	0.423	0.504393	0.4602	0.5298	0.4092	0.4856	0.6166	0.46	0.49	0.45	0.46	0.492	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.660457	1.660457	NA	0.471738	0.484793	ID=COSM149742;OCCURENCE=1(stomach)	0.42	NA	3.576062
1294	12	43840370	43840370	G	A	intronic	ADAMTS20	NA	NA	NA	intronic	ENSG00000173157	NA	NA	NA	NA	NA	12q12	NA	NA	NA	NA	rs61925148	0.14	0.14	0.116	0.129393	0.1382	0.1359	0.2666	0.0469	0.1278	0.14	0.12	0.24	0.08	0.1594	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.884376	NA	NA	0.126395	0.065365	ID=COSN164223;OCCURENCE=1(breast)	0.167	NA	3.576005
1294	9	136081598	136081598	C	T	intronic	OBP2B	NA	NA	NA	intronic	ENSG00000171102	NA	NA	NA	NA	NA	9q34.2	NA	NA	NA	NA	rs28507496	0.46	0.46	0.477	0.392173	0.4245	0.5744	0.4236	0.2322	0.365	0.47	0.6	0.44	0.29	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.542312	NA	NA	NA	NA	NA	0.391	NA	3.5755
1294	10	87966028	87966028	T	C	intronic	GRID1	NA	NA	NA	intronic	ENSG00000182771	NA	NA	NA	NA	NA	10q23.2	NA	NA	NA	NA	rs56757884	0.34	0.34	0.323	0.301717	0.4245	0.2728	0.3847	0.2345	0.2372	0.4	0.29	0.4	0.24	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.574642	NA	NA	NA	NA	NA	0.333	NA	3.5755
1294	12	31254701	31254701	G	T	intronic	DDX11	NA	NA	NA	intronic	ENSG00000013573	NA	NA	NA	NA	NA	12p11.21	NA	NA	NA	NA	rs7966366	0.54	0.54	0.56	0.616613	0.4245	0.7877	0.5908	0.6846	0.5644	0.39	0.67	0.52	0.64	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.896436	NA	NA	NA	NA	NA	NA	NA	3.5755
1294	18	21894351	21894351	A	G	intronic	OSBPL1A	NA	NA	NA	intronic	ENSG00000141447	NA	NA	NA	NA	NA	18q11.2	NA	NA	NA	NA	rs12966893	0.09	0.09	0.094	0.0904553	0.1571	0.003	0.0865	0.0741	0.137	0.17	0.0017	0.12	0.07	0.1236	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.607283	1.607283	NA	0.14422	0.079437	NA	0.094	NA	3.57508
1295	6	90360406	90360406	C	T	intronic	MDN1	NA	NA	NA	intronic	ENSG00000112159	NA	NA	NA	NA	NA	6q15	NA	NA	NA	NA	rs56396054	0.09	0.09	0.077	0.103634	0.1551	0.0476	0.085	0.0613	0.1789	0.14	0.04	0.07	0.06	0.1255	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.403505	NA	NA	0.144419	0.063323	NA	0.138	NA	3.574981
1295	14	23883184	23883184	C	T	intronic	MYH7	NA	NA	NA	intronic	ENSG00000092054	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs3729833	0.14	0.14	0.142	0.134984	0.1402	0.001	0.0937	0.3328	0.0297	0.13	0.0017	0.12	0.33	0.1324	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.822768	NA	NA	0.152442	0.312982	NA	0.261	NA	3.574958
1295	1	215368514	215368514	A	G	intronic	KCNK2	NA	NA	NA	intronic	ENSG00000082482	NA	NA	NA	NA	NA	1q41	NA	NA	NA	NA	rs1556907	0.34	0.34	0.339	0.384784	0.4254	0.3452	0.33	0.2534	0.6002	0.4	0.29	0.35	0.29	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.628666	NA	NA	NA	NA	NA	0.167	NA	3.5746
1295	2	219541056	219541056	T	C	intronic	STK36	NA	NA	NA	intronic	ENSG00000163482	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs2556388	0.46	0.46	0.494	0.481629	0.4254	0.1429	0.4265	0.9266	0.3262	0.42	0.16	0.41	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.700432	NA	NA	NA	NA	NA	0.63	NA	3.5746
1295	3	97957490	97957490	G	A	intergenic	OR5H15,OR5H6	dist=69005;dist=25639	NA	NA	ncRNA_exonic	ENSG00000187900	NA	NA	NA	NA	NA	3q11.2	NA	NA	NA	NA	rs6439724	0.33	0.33	0.329	0.33147	0.4254	0.0387	0.2666	0.5386	0.3027	0.42	0.03	0.3	0.55	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.527359	NA	0.45	NA	NA	NA	0.333	NA	3.5746
1295	4	3235241	3235241	A	G	intronic	HTT	NA	NA	NA	intronic	ENSG00000197386	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs362314	0.43	0.43	0.391	0.416733	0.4254	0.3413	0.4107	0.5348	0.3303	0.44	0.33	0.43	0.52	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.073036	NA	NA	NA	NA	NA	0.5	NA	3.5746
1295	11	95551136	95551136	C	T	intronic	CEP57	NA	NA	NA	intronic	ENSG00000166037	NA	NA	NA	NA	NA	11q21	NA	NA	NA	NA	rs666398	0.34	0.34	0.34	0.271765	0.4254	0.2976	0.2752	0.2012	0.18	0.43	0.35	0.33	0.21	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.283679	NA	NA	NA	NA	NA	0.275	NA	3.5746
1295	16	85699527	85699527	A	G	intronic	GSE1	NA	NA	NA	intronic	ENSG00000131149	NA	NA	NA	NA	NA	16q24.1	NA	NA	NA	NA	rs7195186	0.5	0.5	0.468	0.507987	0.4254	0.6944	0.4121	0.3896	0.6288	0.44	0.69	0.43	0.41	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.216874	NA	NA	NA	NA	NA	0.413	NA	3.5746
1295	18	50731802	50731802	G	A	intronic	DCC	NA	NA	NA	intronic	ENSG00000187323	NA	NA	NA	NA	NA	18q21.2	NA	NA	NA	NA	rs7227069	0.28	0.28	0.244	0.233227	0.4254	0.0228	0.2795	0.292	0.1401	0.43	0.03	0.33	0.28	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.100858	NA	NA	NA	NA	NA	0.239	NA	3.5746
1295	20	47751001	47751001	C	T	intronic	STAU1	NA	NA	NA	intronic	ENSG00000124214	NA	NA	NA	NA	NA	20q13.13	NA	NA	NA	NA	rs6066976	0.35	0.35	0.34	0.35024	0.4254	0.3284	0.3674	0.2882	0.3671	0.43	0.29	0.39	0.26	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.692806	NA	NA	NA	NA	NA	0.312	NA	3.5746
1295	19	52381616	52381616	G	A	intronic	ZNF577	NA	NA	NA	intronic	ENSG00000161551	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs17778649	0.18	0.18	0.16	0.224641	0.1292	0.2976	0.1844	0.1142	0.4254	0.14	0.31	0.18	0.1	0.1828	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.395716	NA	NA	0.113488	0.11734	NA	0.101	NA	3.574512
1295	6	90482250	90482250	T	A	intronic	MDN1	NA	NA	NA	intronic	ENSG00000112159	NA	NA	NA	NA	NA	6q15	NA	NA	NA	NA	rs11961825	0.08	0.08	0.062	0.090655	0.1581	0.0486	0.0922	0.0053	0.1789	0.15	0.04	0.09	0.01	0.1233	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.506717	NA	NA	0.144535	0.028824	NA	0.123	NA	3.574065
1295	6	117649988	117649988	T	C	intronic	ROS1	NA	NA	NA	intronic	ENSG00000047936	NA	NA	NA	NA	NA	6q22.1	NA	NA	NA	NA	rs581235	0.15	0.15	0.138	0.149361	0.1471	0.1528	0.1571	0.1513	0.1401	0.15	0.16	0.14	0.17	0.1411	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.423484	NA	NA	0.138122	0.152397	NA	0.21	NA	3.573678
1295	1	235896726	235896726	C	T	intronic	LYST	NA	NA	NA	intronic	ENSG00000143669	NA	NA	NA	NA	NA	1q42.3	NA	NA	NA	NA	rs6429275	0.41	0.41	0.42	0.41254	0.4264	0.0655	0.3372	0.8812	0.1759	0.42	0.09	0.34	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.537261	1.537261	NA	NA	NA	NA	0.478	NA	3.5736
1295	6	52697601	52697601	T	G	intronic	GSTA5	NA	NA	NA	intronic	ENSG00000182793	NA	NA	NA	NA	NA	6p12.2	NA	NA	NA	NA	rs55815585	0.27	0.27	0.264	0.25599	0.4264	0.1369	0.2795	0.1399	0.3436	0.43	0.14	0.3	0.16	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.682011	NA	NA	NA	NA	NA	0.29	NA	3.5736
1295	11	95519195	95519195	A	T	intronic	FAM76B	NA	NA	NA	intronic	ENSG00000077458	NA	NA	NA	NA	NA	11q21	NA	NA	NA	NA	rs3748252	0.34	0.34	0.363	0.271366	0.4264	0.2976	0.2752	0.1997	0.1789	0.43	0.35	0.33	0.21	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.978684	NA	NA	NA	NA	NA	0.319	NA	3.5736
1295	12	117660467	117660467	C	G	intronic	NOS1	NA	NA	NA	intronic	ENSG00000089250	NA	NA	NA	NA	NA	12q24.22	NA	NA	NA	NA	rs816363	0.51	0.51	0.508	0.543331	0.4264	0.4752	0.634	0.6687	0.5	0.44	0.45	0.6	0.61	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.10557	NA	NA	NA	NA	NA	0.58	NA	3.5736
1295	21	41450511	41450511	T	C	intronic	DSCAM	NA	NA	NA	intronic	ENSG00000171587	NA	NA	NA	NA	NA	21q22.2	NA	NA	NA	NA	rs439535	0.27	0.27	0.258	0.330471	0.4264	0.2133	0.3256	0.0976	0.6708	0.39	0.22	0.31	0.12	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.346566	NA	NA	NA	NA	NA	NA	NA	3.5736
1295	6	55113411	55113411	C	A	intronic	HCRTR2	NA	NA	NA	intronic	ENSG00000137252	NA	NA	NA	NA	NA	6p12.1	Score=824;Name=V$FREAC3_01	Name=CTCF	NA	NA	rs3122169	0.74	0.74	0.746	0.763778	0.831	0.5139	0.5692	0.9622	0.8221	0.82	0.51	0.63	0.95	0.783	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.155055	NA	NA	0.812442	0.938039	NA	0.826	NA	3.573558
1295	6	29693113	29693113	C	T	intronic	HLA-F	NA	NA	NA	intronic	ENSG00000204642	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs2076177	0.19	0.19	0.187	0.230831	0.1183	0.2917	0.1628	0.2632	0.2883	0.12	0.27	0.15	0.24	0.1779	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.291311	NA	NA	0.130698	0.246936	NA	0.232	NA	3.573102
1295	12	27143579	27143579	C	T	intronic	TM7SF3	NA	NA	NA	intronic	ENSG00000064115	NA	NA	NA	NA	NA	12p11.23	NA	NA	NA	NA	rs12299714	0.29	0.29	0.286	NA	NA	NA	NA	NA	NA	0.18	0.4	0.21	0.38	0.2316	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.530399	NA	NA	0.195465	0.324784	NA	0.261	NA	3.572935
1295	9	100617375	100617375	T	C	UTR3	FOXE1	NM_004473:c.*57T>C	NA	NA	UTR3	ENSG00000178919	ENST00000375123:c.*57T>C	NA	NA	NA	NA	9q22.33	NA	NA	NA	NA	rs7046645	0.88	0.88	0.886	0.882788	0.7604	0.9911	0.8271	0.969	0.82	0.76	0.99	0.81	0.97	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.25463	1.25463	NA	NA	NA	NA	0.928	NA	3.5729334
1295	1	45880751	45880751	C	T	intronic	TESK2	NA	NA	NA	ncRNA_exonic	ENSG00000236872	NA	NA	NA	NA	NA	1p34.1	NA	NA	NA	NA	rs781230	0.64	0.64	0.621	0.616014	0.7604	0.62	0.6412	0.41	0.7239	0.77	0.6	0.7	0.45	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.694085	NA	NA	NA	NA	NA	0.594	NA	3.5729333
1295	10	49687850	49687850	G	A	intronic	ARHGAP22	NA	NA	NA	intronic	ENSG00000128805	NA	NA	NA	NA	NA	10q11.22	NA	NA	NA	NA	rs3888298	0.3	0.3	0.294	0.328275	0.1004	0.6151	0.2161	0.348	0.32	0.09	0.6	0.18	0.34	0.2258	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.909866	NA	NA	0.100886	0.289462	NA	0.261	NA	3.572914
1295	1	22328279	22328279	C	T	intronic	CELA3A	NA	NA	NA	intronic	ENSG00000142789	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs12751986	0.25	0.25	0.184	0.229233	0.2107	0.3978	0.4107	0.0212	0.227	0.23	0.37	0.39	0.03	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.450872	NA	NA	0.21653	0.067391	NA	0.217	NA	3.57277
1295	17	7977105	7977105	A	G	intronic	ALOX12B	NA	NA	NA	intronic	ENSG00000179477	NA	NA	NA	NA	NA	17p13.1	NA	Name=SMC3_(ab9263),Znf143_(16618-1-AP),CTCFL_(SC-98982),CTCF,Rad21,CTCF_(SC-5916),NFKB,CTCF_(C-20),PAX5-C20	Name=124	NA	rs12937410	0.84	0.84	0.847	0.850839	0.7913	0.8135	0.7781	0.9788	0.8292	0.79	0.84	0.77	0.97	0.8265	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.308618	NA	NA	0.809535	0.948252	NA	0.877	NA	3.572665
1295	19	49407715	49407715	C	T	intronic	NUCB1	NA	NA	NA	intronic	ENSG00000104805	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs73063515	0.06	0.06	0.05	0.0533147	0.1421	0.001	0.062	0.0045	0.0757	0.14	0.0017	0.07	0.01	0.1199	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.773754	NA	NA	0.165349	0.02837	NA	0.116	NA	3.572651
1295	3	67659817	67659817	G	A	intronic	SUCLG2	NA	NA	NA	intronic	ENSG00000172340	NA	NA	NA	NA	NA	3p14.1	NA	NA	NA	NA	rs2290173	0.43	0.43	0.459	0.447684	0.4274	0.4385	0.2608	0.6793	0.2975	0.42	0.37	0.29	0.63	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.599414	NA	NA	NA	NA	NA	0.522	NA	3.5726
1295	6	154567666	154567666	T	G	intronic	IPCEF1,OPRM1	NA	NA	NA	intronic	ENSG00000074706,ENSG00000112038	NA	NA	NA	NA	NA	6q25.2	NA	NA	NA	NA	rs9479798	0.34	0.34	0.32	0.283946	0.4274	0.2698	0.2723	0.261	0.1902	0.45	0.27	0.32	0.28	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.846002	NA	NA	NA	NA	ID=COSN167916;OCCURENCE=1(large_intestine)	0.319	NA	3.5726
1295	8	145000740	145000740	G	A	intronic	PLEC	NA	NA	NA	intronic	ENSG00000178209	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs7017644	0.25	0.25	0.207	0.230831	0.4274	0.1429	0.2954	0.028	0.3476	0.42	0.16	0.3	0.03	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.077463	NA	NA	NA	NA	NA	0.283	NA	3.5726
1295	8	145000809	145000809	G	A	intronic	PLEC	NA	NA	NA	intronic	ENSG00000178209	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs7017789	0.25	0.25	0.237	0.230831	0.4274	0.1429	0.2954	0.028	0.3476	0.42	0.16	0.3	0.03	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.538291	1.538291	NA	NA	NA	NA	0.275	NA	3.5726
1295	9	131761659	131761659	A	G	intronic	NUP188	NA	NA	NA	intronic	ENSG00000095319	NA	NA	NA	NA	NA	9q34.11	NA	NA	NA	NA	rs2302813	0.28	0.28	0.237	0.261781	0.4274	0.1766	0.4035	0.0885	0.3129	0.43	0.16	0.39	0.11	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.89012	NA	NA	NA	NA	NA	0.333	NA	3.5726
1295	15	85656568	85656568	A	G	intronic	PDE8A	NA	NA	NA	intronic	ENSG00000073417	NA	NA	NA	NA	NA	15q25.3	NA	Name=CTCF	NA	NA	rs2304422	0.54	0.54	0.536	0.544529	0.4652	0.4375	0.4885	0.7738	0.4663	0.46	0.46	0.54	0.74	0.4836	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.156728	NA	NA	0.4786	0.735361	NA	0.514	NA	3.5726
1295	19	2405641	2405641	C	T	intronic	TMPRSS9	NA	NA	NA	intronic	ENSG00000178297	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs4807260	0.64	0.64	0.65	0.658946	0.4274	0.6409	0.7061	0.9183	0.5317	0.45	0.67	0.65	0.91	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.385803	NA	NA	NA	NA	NA	0.659	NA	3.5726
1295	19	11763010	11763010	T	C	intergenic	ZNF627,ZNF833P	dist=33036;dist=21803	NA	NA	ncRNA_exonic	ENSG00000267500	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs10420734	0.42	0.42	0.411	0.455272	0.4274	0.2262	0.4597	0.6263	0.4857	0.43	0.21	0.45	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.620739	NA	NA	NA	NA	NA	0.58	NA	3.5726
1295	21	41450509	41450509	A	C	intronic	DSCAM	NA	NA	NA	intronic	ENSG00000171587	NA	NA	NA	NA	NA	21q22.2	NA	NA	NA	NA	rs394753	0.27	0.27	0.253	0.330871	0.4274	0.2123	0.3256	0.0976	0.6728	0.39	0.22	0.31	0.12	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.52709	NA	NA	NA	NA	NA	NA	NA	3.5726
1295	19	56755536	56755536	C	T	intergenic	ZSCAN5A,ZNF542	dist=15877;dist=123932	NA	NA	intronic	ENSG00000131848,ENSG00000267908	NA	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs116343887	0.03	0.03	0.034	0.0341454	0.0507	0.003	0.0303	0.0295	0.0583	0.05	0.0017	0.03	0.05	0.0435	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.918102	NA	NA	NA	NA	NA	0.022	NA	3.5724667
1295	16	58528812	58528812	G	A	intronic	NDRG4	NA	NA	NA	intronic	ENSG00000103034	NA	NA	NA	NA	NA	16q21	NA	NA	NA	NA	rs34720527	0.12	0.12	0.107	0.145767	0.2137	0.1071	0.0764	0.0098	0.3487	0.22	0.09	0.1	0.02	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.344247	NA	NA	0.214016	0.053468	NA	0.08	NA	3.572284
1295	8	145141143	145141143	G	A	downstream	GPAA1	NA	NA	NA	downstream	ENSG00000197858	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs55750616	0.12	0.12	0.14	0.135583	0.0944	0.001	0.0692	0.3593	0.0613	0.09	0.0017	0.08	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.055907	NA	NA	NA	NA	NA	0.116	NA	3.5722666
1295	19	7621475	7621475	T	G	intronic	PNPLA6	NA	NA	NA	intronic	ENSG00000032444	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs45505598	0.12	0.12	0.127	0.125599	0.1481	NA	0.111	0.2474	0.0777	0.14	NA	0.1	0.23	0.1298	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.174851	NA	NA	0.150233	0.232183	NA	0.261	NA	3.571867
1295	6	32411523	32411523	T	C	intronic	HLA-DRA	NA	NA	NA	intronic	ENSG00000204287	NA	NA	NA	NA	NA	6p21.32	NA	Name=Pol2-4H8	NA	NA	rs2239804	0.51	0.51	0.51	0.538738	0.4553	0.6349	0.5764	0.5015	0.5491	0.44	0.63	0.54	0.48	0.5097	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.173815	NA	NA	0.463257	0.491727	NA	0.543	NA	3.571743
1295	7	100550205	100550205	A	C	intergenic	ACHE,MUC12	dist=56664;dist=62699	NA	NA	exonic	ENSG00000228273	NA	synonymous SNV	ENSG00000228273:ENST00000379458:exon2:c.A786C:p.S262S	NA	NA	7q22.1	NA	NA	NA	NA	rs77471356	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4986	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.148718	NA	NA	0.429684	0.421804	NA	NA	NA	3.571716
1295	1	53237526	53237526	G	A	intronic	ZYG11B	NA	NA	NA	intronic	ENSG00000162378	NA	NA	NA	NA	NA	1p32.3	NA	NA	NA	NA	rs1571979	0.71	0.71	0.723	0.714856	0.4284	0.9792	0.6729	0.9077	0.5061	0.43	0.98	0.62	0.9	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.15621	NA	NA	NA	NA	NA	0.739	NA	3.5716
1295	3	193069125	193069125	G	C	intronic	ATP13A5	NA	NA	NA	intronic	ENSG00000187527	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs55658952	0.42	0.42	0.412	0.426717	0.4284	0.5675	0.4366	0.2398	0.5256	0.42	0.54	0.4	0.29	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.804915	NA	NA	NA	NA	NA	0.341	NA	3.5716
1295	6	70963232	70963232	A	G	intronic	COL9A1	NA	NA	NA	intronic	ENSG00000112280	NA	NA	NA	NA	NA	6q13	NA	NA	NA	NA	rs701689	0.38	0.38	0.388	0.369209	0.4284	0.2927	0.2752	0.5113	0.2618	0.42	0.27	0.32	0.52	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.120057	NA	NA	NA	NA	NA	0.507	NA	3.5716
1295	20	25438952	25438952	G	A	intronic	NINL	NA	NA	NA	intronic	ENSG00000101004	NA	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	rs6138575	0.49	0.49	0.475	0.452077	0.4284	0.9067	0.3213	0.1793	0.4693	0.43	0.92	0.32	0.21	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.361952	NA	NA	NA	NA	NA	0.413	NA	3.5716
1295	20	25442049	25442049	G	A	intronic	NINL	NA	NA	NA	intronic	ENSG00000101004	NA	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	rs6107046	0.51	0.51	0.505	0.478235	0.4284	0.9067	0.3357	0.2708	0.4693	0.43	0.92	0.34	0.27	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.078248	NA	NA	NA	NA	NA	0.42	NA	3.5716
1295	20	25442097	25442097	G	A	intronic	NINL	NA	NA	NA	intronic	ENSG00000101004	NA	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	rs6107047	0.51	0.51	0.5	0.478235	0.4284	0.9067	0.3357	0.2708	0.4693	0.43	0.92	0.34	0.27	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.985164	NA	NA	NA	NA	NA	0.428	NA	3.5716
1295	9	139841212	139841212	T	C	intronic	C8G	NA	NA	NA	intronic	ENSG00000176919	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs41309980	0.11	0.11	0.107	0.108027	0.1312	0.0278	0.1081	0.1755	0.0757	0.14	0.03	0.12	0.16	0.1559	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.432155	1.432155	NA	0.141494	0.190455	NA	0.072	NA	3.571406
1295	2	97862396	97862396	G	A	intronic	ANKRD36	NA	NA	NA	intronic	ENSG00000135976	NA	NA	NA	NA	NA	2q11.2	NA	NA	NA	NA	rs7573581	NA	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4287	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.211141	NA	NA	NA	NA	NA	0.275	NA	3.5713
1295	16	74425548	74425548	A	G	intergenic	LOC283922,CLEC18B	dist=23395;dist=16981	NA	NA	exonic	ENSG00000196436	NA	nonsynonymous SNV	ENSG00000196436:ENST00000429990:exon7:c.A902G:p.Y301C	NA	NA	16q23.1	NA	NA	NA	NA	rs2868591	NA	NA	0.679	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.6317	0.65	1	T	0.0	B	0.0	B	.	.	1.000	P	-1.245	N	1.02	T	-0.920	T	0.000	T	0.333	-1.441	0.02	.	.	.	.	-1.441302	NA	0.36	0.630688	0.645317	NA	0.167	NA	3.5709454
1295	19	39914308	39914308	C	T	intronic	PLEKHG2	NA	NA	NA	intronic	ENSG00000090924	NA	NA	NA	NA	NA	19q13.2	NA	Name=Pol2	NA	NA	rs31725	0.53	0.53	0.515	0.579073	0.4841	0.5585	0.4957	0.6997	0.5941	0.47	0.5	0.51	0.65	0.5017	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.402577	NA	NA	0.443372	0.669542	NA	0.449	NA	3.570828
1295	2	86275985	86275985	A	G	intronic	POLR1A	NA	NA	NA	intronic	ENSG00000068654	NA	NA	NA	NA	NA	2p11.2	NA	NA	Name=33	NA	rs2289239	0.27	0.27	0.245	0.246805	0.4881	0.1151	0.2968	0.056	0.3569	0.47	0.13	0.36	0.06	0.4168	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.67663	NA	NA	0.524284	0.116395	ID=COSN166159;OCCURENCE=1(NS)	0.333	NA	3.570816
1295	19	49407733	49407733	C	T	intronic	NUCB1	NA	NA	NA	intronic	ENSG00000104805	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs116909499	0.07	0.07	0.05	0.0628994	0.1421	0.001	0.0663	0.0386	0.0757	0.14	0.0017	0.07	0.03	0.1227	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.197232	NA	NA	0.164419	0.059918	NA	0.13	NA	3.570781
1295	1	15809706	15809706	T	C	intronic	CELA2B	NA	NA	NA	intronic	ENSG00000215704	NA	NA	NA	NA	NA	1p36.21	NA	NA	NA	NA	rs12129367	0.57	0.57	0.576	0.566094	0.4294	0.6369	0.5259	0.7587	0.4018	0.45	0.62	0.53	0.73	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.788902	NA	NA	NA	NA	NA	0.428	NA	3.5706
1295	1	179364391	179364391	A	G	intronic	AXDND1	NA	NA	NA	intronic	ENSG00000162779	NA	NA	NA	NA	NA	1q25.2	NA	NA	NA	NA	rs61173288	0.38	0.38	0.347	0.363419	0.4294	0.4246	0.4135	0.1884	0.4335	0.41	0.46	0.44	0.19	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.160576	NA	NA	NA	NA	NA	0.406	NA	3.5706
1295	1	205065733	205065733	G	T	intronic	RBBP5	NA	NA	NA	intronic	ENSG00000117222	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs11577406	0.24	0.24	0.218	0.182308	0.4294	0.0585	0.2594	0.1097	0.0992	0.42	0.06	0.31	0.1	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.421278	1.421278	NA	NA	NA	NA	0.399	NA	3.5706
1295	8	87679098	87679098	G	A	intronic	CNGB3	NA	NA	NA	intronic	ENSG00000170289	NA	NA	NA	NA	NA	8q21.3	NA	NA	NA	NA	rs3735967	0.38	0.38	0.377	0.360423	0.4294	0.373	0.317	0.3154	0.3681	0.41	0.39	0.38	0.32	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.137654	NA	NA	NA	NA	NA	0.333	NA	3.5706
1295	12	133385188	133385188	A	T	intronic	GOLGA3	NA	NA	NA	intronic	ENSG00000090615	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs3741488	0.52	0.52	0.518	0.526158	0.4294	0.63	0.5533	0.553	0.4632	0.44	0.62	0.54	0.53	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.676153	NA	NA	NA	NA	NA	0.391	NA	3.5706
1295	17	7840679	7840679	G	A	intronic	CNTROB	NA	NA	NA	intronic	ENSG00000170037	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs4791987	0.57	0.57	0.55	0.621605	0.4294	0.8016	0.6484	0.5386	0.727	0.44	0.74	0.58	0.56	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.425398	NA	NA	NA	NA	NA	0.558	NA	3.5706
1295	17	80526139	80526139	A	G	intronic	FOXK2	NA	NA	NA	intronic	ENSG00000141568	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs2291395	0.44	0.44	0.43	0.464058	0.4294	0.4266	0.4582	0.4675	0.5378	0.43	0.41	0.43	0.5	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.352115	NA	NA	NA	NA	NA	0.471	NA	3.5706
1295	19	14762169	14762169	C	T	intronic	EMR3	NA	NA	NA	intronic	ENSG00000131355	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs11670964	0.47	0.47	0.461	0.489417	0.4294	0.6151	0.5317	0.3313	0.6053	0.46	0.6	0.45	0.36	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.796809	NA	NA	NA	NA	NA	0.471	NA	3.5706
1295	20	25438928	25438928	G	C	intronic	NINL	NA	NA	NA	intronic	ENSG00000101004	NA	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	rs454723	0.55	0.55	0.538	0.53095	0.4294	0.9097	0.3516	0.4334	0.5041	0.43	0.93	0.35	0.42	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.530674	NA	NA	NA	NA	NA	0.478	NA	3.5706
1295	6	27440004	27440004	A	C	intronic	ZNF184	NA	NA	NA	intronic	ENSG00000096654	NA	NA	NA	NA	NA	6p22.1	NA	Name=CTCF,Pol2,ZNF263	NA	NA	rs7750795	0.62	0.62	0.625	0.637181	0.7147	0.5774	0.7003	0.5348	0.7127	0.71	0.55	0.68	0.52	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.549143	2.549143	NA	0.714959	0.558526	NA	0.667	NA	3.570341
1295	3	197574936	197574936	G	C	intronic	LRCH3	NA	NA	NA	intronic	ENSG00000186001	NA	NA	NA	NA	NA	3q29	NA	NA	Name=69	NA	rs2306439	0.37	0.37	0.348	0.371006	0.5099	0.4554	0.3847	0.0688	0.5399	0.49	0.45	0.4	0.06	0.4436	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.005499	2.005499	NA	0.476163	0.150023	ID=COSN167130;OCCURENCE=1(large_intestine)	0.312	NA	3.570337
1295	8	91031074	91031074	G	A	intronic	DECR1	NA	NA	NA	UTR3	ENSG00000104325	ENST00000518725:c.*15G>A	NA	NA	NA	NA	8q21.3	NA	NA	NA	NA	rs1805867	0.17	0.17	0.128	0.189497	0.1958	0.2381	0.2709	0.0189	0.3057	0.2	0.23	0.22	0.02	0.2227	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.32874	NA	NA	0.177982	0.057803	NA	0.116	NA	3.5701847
1295	20	20021301	20021301	T	C	intronic	CRNKL1	NA	NA	NA	intronic	ENSG00000101343	NA	NA	NA	NA	NA	20p11.23	NA	NA	NA	NA	rs3828003	0.4	0.4	0.4	0.397963	0.1024	0.7192	0.3487	0.5431	0.2096	0.1	0.72	0.33	0.52	0.2251	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.021407	NA	NA	0.102466	0.462551	NA	0.312	NA	3.570034
1295	2	101014363	101014363	C	T	intronic	CHST10	NA	NA	NA	intronic	ENSG00000115526	NA	NA	NA	NA	NA	2q11.2	NA	Name=ZNF263	NA	NA	rs2241809	0.43	0.43	0.377	0.367013	0.4871	0.7093	0.4496	0.031	0.2863	0.48	0.71	0.43	0.03	0.4613	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.988569	NA	NA	0.481744	0.111893	NA	0.341	NA	3.569856
1295	2	160729186	160729186	T	C	intronic	LY75,LY75-CD302	NA	NA	NA	intronic	ENSG00000054219,ENSG00000248672	NA	NA	NA	NA	NA	2q24.2	NA	NA	NA	NA	rs10168271	0.47	0.47	0.433	0.503195	0.4304	0.7133	0.5548	0.1566	0.7935	0.43	0.73	0.54	0.17	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.865183	NA	NA	NA	NA	NA	0.384	NA	3.5696
1295	4	166403574	166403574	A	G	intronic	CPE	NA	NA	NA	intronic	ENSG00000109472	NA	NA	NA	NA	NA	4q32.3	NA	NA	NA	NA	rs2289230	0.46	0.46	0.455	0.482029	0.4304	0.4266	0.3473	0.6316	0.4857	0.43	0.4	0.39	0.62	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.77265	NA	NA	NA	NA	NA	0.5	NA	3.5696
1295	4	166929276	166929276	A	G	intronic	TLL1	NA	NA	NA	intronic	ENSG00000038295	NA	NA	NA	NA	NA	4q32.3	NA	NA	NA	NA	rs3775321	0.53	0.53	0.525	0.542532	0.4304	0.5546	0.3977	0.7458	0.4734	0.43	0.56	0.4	0.72	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.699855	NA	NA	NA	NA	NA	0.471	NA	3.5696
1295	11	47776283	47776283	C	T	intronic	FNBP4	NA	NA	NA	intronic	ENSG00000109920	NA	NA	NA	NA	NA	11p11.2	NA	NA	NA	NA	rs7929014	0.32	0.32	0.307	0.344649	0.4304	0.4355	0.317	0.0847	0.5337	0.43	0.35	0.34	0.12	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.927965	NA	NA	NA	NA	NA	0.297	NA	3.5696
1295	20	25438868	25438868	T	C	intronic	NINL	NA	NA	NA	intronic	ENSG00000101004	NA	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	rs416745	0.55	0.55	0.533	0.539337	0.4304	0.9097	0.353	0.4637	0.5041	0.43	0.93	0.35	0.45	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.149364	NA	NA	NA	NA	NA	0.493	NA	3.5696
1295	20	45357878	45357878	A	G	intronic	SLC2A10	NA	NA	NA	intronic	ENSG00000197496	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs1122067	0.43	0.43	0.386	0.378794	0.4304	0.5952	0.4452	0.1823	0.3211	0.44	0.61	0.46	0.17	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.502699	NA	NA	NA	NA	NA	0.355	NA	3.5696
1295	1	207758232	207758232	A	G	intronic	CR1	NA	NA	NA	ncRNA_intronic	ENSG00000236911	NA	NA	NA	NA	NA	1q32.2	NA	NA	NA	NA	rs1752688	0.38	0.38	0.357	0.484824	0.2247	0.3294	0.3573	0.8608	0.4949	0.22	0.24	0.36	0.82	0.3256	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.692389	NA	NA	0.213494	0.740123	NA	0.413	NA	3.5695393
1295	7	97481812	97481812	C	T	intronic	ASNS	NA	NA	NA	intronic	ENSG00000070669	NA	NA	NA	NA	NA	7q21.3	NA	NA	NA	NA	rs10486011	0.16	0.16	0.145	0.172923	0.1392	0.1091	0.1369	0.2307	0.2209	0.14	0.11	0.15	0.23	0.1534	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.216511	NA	NA	0.137907	0.215388	NA	0.203	NA	3.569493
1295	4	189022420	189022420	A	G	intronic	TRIML2	NA	NA	NA	intronic	ENSG00000179046	NA	NA	NA	NA	NA	4q35.2	NA	NA	NA	NA	rs4862860	0.17	0.17	0.153	0.163339	0.1382	0.1935	0.2277	0.1808	0.089	0.13	0.23	0.2	0.16	0.1579	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.046154	NA	NA	0.134535	0.193827	NA	0.145	NA	3.569365
1295	11	124135481	124135481	C	T	exonic	OR8G5	NA	synonymous SNV	OR8G5:NM_001005198:exon1:c.C759T:p.Y253Y	ncRNA_exonic	ENSG00000255298	NA	NA	NA	NA	NA	11q24.2	NA	NA	NA	NA	rs2466701	0.5	0.5	0.463	0.438498	0.5527	0.5833	0.5591	0.292	0.2843	0.54	0.59	0.54	0.3	0.4975	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.347662	NA	NA	0.54728	0.335028	NA	0.304	NA	3.5691866
1295	20	61460338	61460338	C	T	intronic	COL9A3	NA	NA	NA	intronic	ENSG00000092758	NA	NA	NA	NA	NA	20q13.33	Score=784;Name=V$AHRARNT_02	NA	NA	NA	rs6062700	0.61	0.61	0.6	0.629393	0.4115	0.744	0.5216	0.8215	0.5521	0.42	0.73	0.54	0.8	0.5762	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.76337	NA	NA	0.443396	0.774896	NA	0.29	NA	3.568904
1295	16	85112002	85112002	T	G	intronic	KIAA0513	NA	NA	NA	intronic	ENSG00000135709	NA	NA	NA	NA	NA	16q24.1	NA	NA	Name=5	NA	rs2291967	0.56	0.56	0.568	0.602436	0.4374	0.4633	0.6585	0.8797	0.501	0.43	0.44	0.59	0.86	0.5256	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.014583	NA	NA	0.46814	0.810965	NA	0.58	NA	3.56886
1295	2	28847806	28847806	C	G	intronic	PLB1	NA	NA	NA	intronic	ENSG00000163803	NA	NA	NA	NA	NA	2p23.2	NA	NA	NA	NA	rs11127181	0.61	0.61	0.617	0.603435	0.4314	0.8978	0.4928	0.6626	0.4755	0.44	0.85	0.48	0.67	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.053303	NA	NA	NA	NA	NA	0.594	NA	3.5686
1295	3	49459376	49459376	T	C	intronic	AMT	NA	NA	NA	intronic	ENSG00000145020	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs1464566	0.55	0.55	0.509	0.582668	0.4314	0.9117	0.6153	0.3124	0.7413	0.43	0.91	0.59	0.31	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.466603	NA	NA	NA	NA	NA	0.493	NA	3.5686
1295	8	145058037	145058037	A	G	intronic	PARP10	NA	NA	NA	intronic	ENSG00000178685	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs11989052	0.38	0.38	0.398	0.391374	0.4314	0.1458	0.2795	0.6165	0.3783	0.42	0.15	0.32	0.63	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.176286	NA	NA	NA	NA	NA	0.449	NA	3.5686
1295	9	116794784	116794784	A	G	intronic	ZNF618	NA	NA	NA	intronic	ENSG00000157657	NA	NA	NA	NA	NA	9q32	NA	NA	NA	NA	rs2116407	0.56	0.56	0.583	0.544129	0.4314	0.6379	0.3847	0.7716	0.3691	0.44	0.67	0.39	0.75	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.375661	NA	NA	NA	NA	NA	0.609	NA	3.5686
1295	10	105956776	105956776	A	G	intronic	WDR96	NA	NA	NA	intronic	ENSG00000197748	NA	NA	NA	NA	NA	10q25.1	NA	NA	NA	NA	rs584309	0.46	0.46	0.491	0.505192	0.4314	0.4038	0.3617	0.6974	0.5276	0.43	0.37	0.38	0.68	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.000214	NA	NA	NA	NA	NA	0.391	NA	3.5686
1295	20	25271326	25271326	C	T	intronic	PYGB	NA	NA	NA	intronic	ENSG00000100994	NA	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	rs2258066	0.55	0.55	0.564	0.536342	0.4314	0.9107	0.3473	0.4508	0.5082	0.44	0.93	0.35	0.44	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.677187	NA	NA	NA	NA	NA	0.486	NA	3.5686
1295	22	32804665	32804665	T	C	intronic	C22orf28	NA	NA	NA	intronic	ENSG00000100220	NA	NA	NA	NA	NA	22q12.3	NA	NA	NA	NA	rs2076044	0.39	0.39	0.385	0.406749	0.4314	0.1835	0.3862	0.553	0.4284	0.44	0.19	0.39	0.57	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.741791	NA	NA	NA	NA	NA	0.522	NA	3.5686
1295	8	69730432	69730432	G	A	intronic	C8orf34	NA	NA	NA	intronic	ENSG00000165084	NA	NA	NA	NA	NA	8q13.2	NA	NA	NA	NA	rs16935106	0.19	0.19	0.202	0.21845	0.1282	0.4276	0.1311	0.1225	0.2873	0.12	0.41	0.11	0.11	0.1729	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.329711	NA	NA	0.13044	0.128974	NA	0.123	NA	3.56846
1295	19	43439970	43439970	T	G	intronic	PSG7	NA	NA	NA	intronic	ENSG00000221878	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs112579708	0.14	0.14	0.117	0.13758	0.1431	0.0109	0.2277	0.1914	0.1258	0.15	0.01	0.22	0.23	0.1439	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.946419	NA	NA	0.144951	0.177581	NA	0.196	NA	3.568049
1295	8	145639320	145639320	G	C	intronic	SLC39A4	NA	NA	NA	intronic	ENSG00000147804	NA	NA	NA	NA	NA	8q24.3	NA	NA	Name=2	NA	rs736676	0.4	0.4	0.361	0.36222	0.4771	0.2966	0.415	0.3336	0.3129	0.5	0.3	0.43	0.33	0.4658	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.562595	NA	NA	0.489282	0.366818	NA	0.268	NA	3.567818
1295	12	6708898	6708898	C	T	intronic	CHD4	NA	NA	NA	intronic	ENSG00000111642	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs7132970	0.09	0.09	0.086	0.10024	0.1362	0.004	0.072	0.1286	0.1442	0.13	0.0017	0.09	0.14	0.1313	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.441878	1.441878	NA	0.164767	0.129823	NA	0.116	NA	3.567733
1295	3	49406080	49406080	T	C	intronic	RHOA	NA	NA	NA	intronic	ENSG00000067560	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs2878298	0.55	0.55	0.532	0.583067	0.4324	0.9117	0.6167	0.3147	0.7382	0.43	0.91	0.59	0.31	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.616095	NA	NA	NA	NA	NA	0.493	NA	3.5676
1295	4	54011424	54011424	C	T	intronic	SCFD2	NA	NA	NA	intronic	ENSG00000184178	NA	NA	NA	NA	NA	4q12	NA	NA	NA	NA	rs4864727	0.41	0.41	0.405	0.435503	0.4324	0.4692	0.4496	0.3177	0.5532	0.43	0.48	0.42	0.27	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.582897	NA	NA	NA	NA	NA	0.486	NA	3.5676
1295	4	133879820	133879820	T	C	intergenic	NONE,PCDH10	dist=NONE;dist=190650	NA	NA	ncRNA_intronic	ENSG00000251488	NA	NA	NA	NA	NA	4q28.3	NA	NA	NA	NA	rs1448011	0.55	0.55	0.521	0.535942	0.4324	0.7034	0.5937	0.4781	0.5072	0.44	0.71	0.56	0.53	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.572612	NA	NA	NA	NA	NA	0.565	NA	3.5676
1295	5	7757812	7757812	A	G	intronic	ADCY2	NA	NA	NA	intronic	ENSG00000078295	NA	NA	NA	NA	NA	5p15.31	NA	NA	NA	NA	rs3935156	0.47	0.47	0.458	0.487021	0.4324	0.3363	0.5922	0.7012	0.3344	0.42	0.31	0.53	0.7	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.391385	NA	NA	NA	NA	NA	0.42	NA	3.5676
1295	6	24460707	24460707	A	T	intronic	GPLD1	NA	NA	NA	intronic	ENSG00000112293	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs2744576	0.38	0.38	0.41	0.390176	0.4324	0.3661	0.3833	0.3502	0.4305	0.42	0.35	0.38	0.37	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.830475	NA	NA	NA	NA	NA	0.333	NA	3.5676
1295	6	29796685	29796685	T	C	intronic	HLA-G	NA	NA	NA	intronic	ENSG00000204632	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs1632941	0.5	0.5	0.444	0.544129	0.4324	0.6022	0.4654	0.5083	0.7035	0.42	0.63	0.46	0.49	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.474589	NA	NA	NA	NA	NA	0.572	NA	3.5676
1295	6	29798039	29798039	G	A	intronic	HLA-G	NA	NA	NA	intronic	ENSG00000204632	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs1632932	0.5	0.5	0.494	0.544129	0.4324	0.6022	0.4654	0.5083	0.7035	0.42	0.64	0.46	0.5	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.814927	NA	NA	NA	NA	NA	0.572	NA	3.5676
1295	10	105945985	105945985	A	C	intronic	WDR96	NA	NA	NA	intronic	ENSG00000197748	NA	NA	NA	NA	NA	10q25.1	NA	NA	NA	NA	rs479879	0.46	0.46	0.484	0.504992	0.4324	0.4028	0.3602	0.6974	0.5276	0.43	0.37	0.38	0.69	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.910152	NA	NA	NA	NA	NA	0.406	NA	3.5676
1295	12	71526414	71526414	T	C	intronic	TSPAN8	NA	NA	NA	intronic	ENSG00000127324	NA	NA	NA	NA	NA	12q21.1	NA	NA	NA	NA	rs2270588	0.41	0.41	0.384	0.391973	0.4324	0.5724	0.5202	0.1498	0.4008	0.42	0.58	0.49	0.15	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.487458	NA	NA	NA	NA	NA	0.319	NA	3.5676
1295	16	628302	628302	A	G	intronic	PIGQ	NA	NA	NA	intronic	ENSG00000007541	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs3752568	0.52	0.52	0.473	0.532149	0.4324	0.6369	0.4914	0.4803	0.6258	0.46	0.63	0.5	0.51	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.326772	NA	NA	NA	NA	NA	0.486	NA	3.5676
1295	16	630025	630025	C	G	intronic	PIGQ	NA	NA	NA	intronic	ENSG00000007541	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs2071981	0.52	0.52	0.475	0.535343	0.4324	0.6359	0.4928	0.4917	0.6268	0.46	0.63	0.5	0.52	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.075739	NA	NA	NA	NA	NA	0.297	NA	3.5676
1295	16	630089	630089	C	T	intronic	PIGQ	NA	NA	NA	intronic	ENSG00000007541	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs7191939	0.52	0.52	0.501	0.524161	0.4324	0.6359	0.487	0.4523	0.6268	0.46	0.63	0.49	0.49	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.842482	NA	NA	NA	NA	NA	0.246	NA	3.5676
1295	18	21897189	21897189	A	G	intronic	OSBPL1A	NA	NA	NA	intronic	ENSG00000141447	NA	NA	NA	NA	NA	18q11.2	NA	NA	NA	NA	rs34306542	0.12	0.12	0.125	0.118411	0.1571	0.0407	0.0908	0.149	0.137	0.17	0.04	0.12	0.15	0.1308	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.97533	NA	NA	0.145	0.145483	NA	0.138	NA	3.5671
1295	7	142749417	142749417	C	T	upstream	OR6V1	NA	NA	NA	UTR5	ENSG00000225781	ENST00000418316:c.-21C>T	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs17164102	0.19	0.19	0.217	0.186302	0.1461	0.0347	0.1254	0.4312	0.0961	0.13	0.04	0.15	0.47	0.1445	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.437829	NA	NA	0.142666	0.362895	NA	0.21	NA	3.566734
1295	2	234078582	234078582	G	A	intronic	INPP5D	NA	NA	NA	intronic	ENSG00000168918	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs10754947	0.22	0.22	0.197	0.191294	0.4334	0.0169	0.3084	0.0439	0.2382	0.45	0.01	0.32	0.05	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.757636	NA	NA	NA	NA	NA	0.203	NA	3.5666
1295	4	120079387	120079387	G	A	intronic	MYOZ2	NA	NA	NA	intronic	ENSG00000172399	NA	NA	NA	NA	NA	4q26	NA	NA	NA	NA	rs11729978	0.35	0.35	0.326	0.309105	0.4334	0.3998	0.3256	0.1876	0.2403	0.44	0.41	0.3	0.19	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.270966	NA	NA	NA	NA	NA	0.348	NA	3.5666
1295	6	109797304	109797304	A	G	intronic	ZBTB24	NA	NA	NA	intronic	ENSG00000112365	NA	NA	NA	NA	NA	6q21	NA	NA	NA	NA	rs2236084	0.55	0.55	0.558	0.562899	0.4334	0.498	0.4928	0.7542	0.5542	0.44	0.56	0.49	0.75	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.768101	NA	NA	NA	NA	NA	0.507	NA	3.5666
1295	8	23106665	23106665	A	G	intronic	CHMP7	NA	NA	NA	intronic	ENSG00000147457	NA	NA	NA	NA	NA	8p21.3	NA	NA	NA	NA	rs2280934	0.36	0.36	0.324	0.358626	0.4334	0.3631	0.4755	0.1195	0.5174	0.43	0.37	0.45	0.15	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.367195	NA	NA	NA	NA	NA	0.435	NA	3.5666
1295	9	127616323	127616323	G	C	intronic	WDR38	NA	NA	NA	intronic	ENSG00000136918	NA	NA	NA	NA	NA	9q33.3	NA	NA	NA	NA	rs10760380	0.5	0.5	0.497	0.493011	0.4334	0.626	0.4841	0.5257	0.3793	0.4	0.63	0.46	0.51	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.144799	NA	NA	NA	NA	NA	0.42	NA	3.5666
1295	12	21628320	21628320	C	T	intronic	RECQL	NA	NA	NA	intronic	ENSG00000004700	NA	NA	NA	NA	NA	12p12.1	NA	NA	NA	NA	rs10841831	0.48	0.48	0.45	0.486821	0.4334	0.5417	0.4798	0.5076	0.4622	0.44	0.53	0.46	0.51	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.612815	NA	NA	NA	NA	NA	0.58	NA	3.5666
1295	12	21628336	21628336	G	A	intronic	RECQL	NA	NA	NA	intronic	ENSG00000004700	NA	NA	NA	NA	NA	12p12.1	NA	NA	NA	NA	rs10841832	0.48	0.48	0.458	0.486821	0.4334	0.5417	0.4798	0.5076	0.4622	0.44	0.53	0.46	0.51	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.343241	NA	NA	NA	NA	NA	0.587	NA	3.5666
1295	12	31242232	31242232	G	T	intronic	DDX11	NA	NA	NA	intronic	ENSG00000013573	NA	NA	NA	NA	NA	12p11.21	NA	NA	NA	NA	rs4081649	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4334	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.434757	NA	NA	NA	NA	NA	NA	NA	3.5666
1295	14	57092038	57092038	A	G	intronic	TMEM260	NA	NA	NA	intronic	ENSG00000070269	NA	NA	NA	NA	NA	14q22.3	NA	NA	NA	NA	rs2274706	0.41	0.41	0.364	0.396765	0.4334	0.4643	0.5504	0.2307	0.4049	0.43	0.49	0.51	0.22	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.59856	NA	NA	NA	NA	NA	0.29	NA	3.5666
1295	15	78457242	78457242	A	G	intronic	IDH3A	NA	NA	NA	intronic	ENSG00000166411	NA	NA	NA	NA	NA	15q25.1	NA	NA	NA	NA	rs12904700	0.39	0.39	0.399	0.373602	0.4334	0.1865	0.3991	0.4849	0.3364	0.43	0.19	0.43	0.52	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.29283	NA	NA	NA	NA	NA	0.399	NA	3.5666
1295	20	25264664	25264664	T	C	intronic	PYGB	NA	NA	NA	intronic	ENSG00000100994	NA	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	rs2257705	0.55	0.55	0.54	0.536941	0.4334	0.9107	0.3473	0.4516	0.5082	0.44	0.93	0.35	0.44	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.824724	NA	NA	NA	NA	NA	0.486	NA	3.5666
1295	20	61303004	61303004	T	C	intronic	SLCO4A1	NA	NA	NA	intronic	ENSG00000101187	NA	NA	NA	NA	NA	20q13.33	NA	NA	NA	NA	rs3787538	0.37	0.37	0.368	0.359425	0.4334	0.3889	0.3876	0.3185	0.2883	0.42	0.41	0.35	0.27	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.508712	NA	NA	NA	NA	NA	0.384	NA	3.5666
1295	19	40360845	40360845	C	T	intronic	FCGBP	NA	NA	NA	intronic	ENSG00000090920	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs3760929	0.09	0.09	0.077	0.0920527	0.1402	0.0387	0.1931	0.0348	0.1033	0.14	0.03	0.13	0.04	0.1359	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.264128	NA	NA	0.157326	0.077848	NA	0.188	NA	3.566574
1295	19	56297249	56297249	C	G	intronic	NLRP11	NA	NA	NA	intronic	ENSG00000179873	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs59238812	0.13	0.13	0.133	0.138578	0.1302	0.003	0.1095	0.3101	0.0757	0.11	NA	0.12	0.3	0.1382	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.532587	NA	NA	0.165233	0.279846	NA	0.174	NA	3.566367
1295	6	28483590	28483590	A	G	upstream	GPX6	NA	NA	NA	upstream	ENSG00000198704	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs6921021	0.29	0.29	0.271	0.304712	0.1004	0.4821	0.245	0.351	0.3119	0.1	0.49	0.26	0.36	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.879116	NA	NA	NA	NA	NA	0.268	NA	3.5662666
1295	3	196054488	196054488	A	G	ncRNA_intronic	TM4SF19-TCTEX1D2	NA	NA	NA	intronic	ENSG00000145107	NA	NA	NA	NA	NA	3q29	NA	NA	Name=19	NA	rs6782336	0.64	0.64	0.622	0.63119	0.5726	0.871	0.6023	0.441	0.7219	0.59	0.88	0.62	0.48	0.6205	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.174579	NA	NA	0.57457	0.476623	NA	0.543	NA	3.5656633
1295	5	137506434	137506434	G	A	intronic	BRD8	NA	NA	NA	intronic	ENSG00000112983	NA	NA	NA	NA	NA	5q31.2	NA	NA	NA	NA	rs13155519	0.43	0.43	0.442	0.445288	0.4344	0.5923	0.3501	0.3759	0.4663	0.44	0.57	0.31	0.36	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.570188	NA	NA	NA	NA	NA	0.457	NA	3.5656
1295	7	45142145	45142145	T	C	intronic	TBRG4	NA	NA	NA	intronic	ENSG00000136270	NA	NA	NA	NA	NA	7p13	NA	NA	NA	NA	rs1992292	0.49	0.49	0.479	0.528954	0.4344	0.37	0.4914	0.7035	0.5808	0.44	0.35	0.5	0.72	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.09912	2.09912	NA	NA	NA	NA	0.572	NA	3.5656
1295	7	45142834	45142834	G	C	intronic	TBRG4	NA	NA	NA	intronic	ENSG00000136270	NA	NA	NA	NA	NA	7p13	NA	NA	NA	NA	rs2289374	0.49	0.49	0.486	0.53155	0.4344	0.369	0.4899	0.7148	0.5808	0.44	0.35	0.49	0.73	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.99629	NA	NA	NA	NA	NA	0.58	NA	3.5656
1295	15	20173178	20173178	A	C	intergenic	NONE,CHEK2P2	dist=NONE;dist=314819	NA	NA	ncRNA_exonic	ENSG00000258706	NA	NA	NA	NA	NA	15q11.1	NA	NA	NA	NA	rs74001139	NA	NA	0.28	0.458466	0.4344	0.4653	0.4712	0.4455	0.4847	NA	NA	NA	NA	NA	0.065	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.245131	NA	NA	NA	NA	NA	0.058	NA	3.5656
1295	1	236399442	236399442	G	T	intronic	ERO1LB	NA	NA	NA	UTR3	ENSG00000086619	ENST00000327333:c.*253C>A	NA	NA	NA	NA	1q42.3	NA	NA	NA	NA	rs1254194	0.34	0.34	0.286	0.328874	0.6014	0.1329	0.3631	0.112	0.5194	0.62	0.13	0.36	0.14	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.307962	NA	NA	NA	NA	NA	0.333	NA	3.5652667
1295	6	41059458	41059458	T	G	intronic	NFYA	NA	NA	NA	intronic	ENSG00000001167,ENSG00000124596	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs12189627	0.18	0.18	0.184	0.195088	0.1521	0.005	0.1268	0.5242	0.0389	0.14	0.0035	0.12	0.47	0.1418	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.959888	2.959888	NA	0.141047	0.44167	NA	0.275	NA	3.565053
1296	7	100484917	100484917	C	T	intronic	SRRT	NA	NA	NA	intronic	ENSG00000087087	NA	NA	NA	NA	NA	7q22.1	NA	Name=Pol2	NA	NA	rs6954151	0.48	0.48	0.449	0.462859	0.4612	0.8056	0.5865	0.0983	0.5164	0.46	0.81	0.54	0.1	0.5007	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.292763	NA	NA	0.473488	0.181117	NA	0.362	NA	3.564612
1296	2	69009304	69009304	C	T	intronic	ARHGAP25	NA	NA	NA	intronic	ENSG00000163219	NA	NA	NA	NA	NA	2p13.3	NA	NA	NA	NA	rs2271834	0.32	0.32	0.311	0.315695	0.4354	0.1141	0.3991	0.3336	0.317	0.42	0.13	0.38	0.35	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.875045	NA	NA	NA	NA	NA	0.384	NA	3.5646
1296	3	38738717	38738717	G	A	downstream	SCN10A	NA	NA	NA	UTR3	ENSG00000185313	ENST00000449082:c.*123C>T	NA	NA	NA	NA	3p22.2	NA	NA	NA	NA	rs6599240	0.36	0.36	0.37	0.372804	0.4354	0.1597	0.4323	0.4418	0.3926	0.45	0.13	0.46	0.45	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.126844	NA	NA	NA	NA	NA	0.529	NA	3.5646
1296	4	160260209	160260209	G	T	intronic	RAPGEF2	NA	NA	NA	intronic	ENSG00000109756	NA	NA	NA	NA	NA	4q32.1	NA	NA	NA	NA	rs13127789	0.32	0.32	0.304	0.298722	0.4354	0.0694	0.3256	0.3132	0.3558	0.45	0.06	0.37	0.37	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.372614	1.372614	NA	NA	NA	NA	0.362	NA	3.5646
1296	5	137897589	137897589	A	C	intronic	HSPA9	NA	NA	NA	intronic	ENSG00000113013	NA	NA	NA	NA	NA	5q31.2	NA	NA	NA	NA	rs256007	0.6	0.6	0.623	0.635583	0.4354	0.7917	0.3703	0.8124	0.6299	0.43	0.81	0.36	0.79	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.333681	NA	NA	NA	NA	NA	0.609	NA	3.5646
1296	7	64151829	64151829	G	C	intronic	ZNF107	NA	NA	NA	intronic	ENSG00000196247	NA	NA	NA	NA	NA	7q11.21	NA	NA	NA	NA	rs17779754	0.31	0.31	0.311	0.320687	0.4354	0.25	0.379	0.1195	0.5061	0.42	0.25	0.39	0.13	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.010399	NA	NA	NA	NA	NA	0.232	NA	3.5646
1296	15	41819998	41819998	G	A	intronic	RPAP1	NA	NA	NA	intronic	ENSG00000103932	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs11070334	0.3	0.3	0.283	0.285942	0.4354	0.2768	0.3329	0.0469	0.4315	0.43	0.32	0.33	0.04	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.517843	NA	NA	NA	NA	NA	0.297	NA	3.5646
1296	18	84200	84200	C	A	intergenic	NONE,ROCK1P1	dist=NONE;dist=24865	NA	NA	ncRNA_intronic	ENSG00000262081	NA	NA	NA	NA	NA	18p11.32	NA	NA	NA	NA	rs55853920	0.51	0.51	0.502	0.513978	0.4354	0.504	0.5058	0.5658	0.5409	0.45	0.53	0.51	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.454379	NA	NA	NA	NA	NA	0.471	NA	3.5646
1296	19	39215333	39215333	C	T	intronic	ACTN4	NA	NA	NA	intronic	ENSG00000130402	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs3786851	0.37	0.37	0.36	0.328674	0.4354	0.4306	0.2824	0.1921	0.3313	0.44	0.47	0.31	0.19	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.175575	NA	NA	NA	NA	NA	0.355	NA	3.5646
1296	19	55086106	55086106	C	G	intronic	LILRA2	NA	NA	NA	intronic	ENSG00000104972,ENSG00000239998	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs45497601	0.28	0.28	0.275	0.252396	0.4354	0.2024	0.2507	0.1286	0.2843	0.42	0.19	0.31	0.14	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.712224	NA	NA	NA	NA	NA	0.167	NA	3.5646
1296	10	27436295	27436295	A	C	intronic	YME1L1	NA	NA	NA	UTR3	ENSG00000136758	ENST00000477432:c.*60T>G	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs3780926	0.43	0.43	0.4	0.397165	0.6024	0.4375	0.4957	0.1309	0.4346	0.59	0.38	0.52	0.15	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.353458	NA	NA	NA	NA	NA	0.399	NA	3.5642667
1296	4	3225389	3225389	A	G	intronic	HTT	NA	NA	NA	intronic	ENSG00000197386	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs82333	0.45	0.45	0.42	0.430911	0.4364	0.3839	0.4135	0.5545	0.319	0.44	0.39	0.43	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.284685	NA	NA	NA	NA	NA	0.522	NA	3.5636
1296	4	40895132	40895132	T	C	intronic	APBB2	NA	NA	NA	intronic	ENSG00000163697	NA	NA	NA	NA	NA	4p14	NA	NA	NA	NA	rs6849533	0.49	0.49	0.472	0.510184	0.4364	0.6002	0.4308	0.4433	0.6401	0.43	0.62	0.42	0.48	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.123147	NA	NA	NA	NA	NA	0.522	NA	3.5636
1296	14	94776441	94776441	C	A	intronic	SERPINA6	NA	NA	NA	intronic	ENSG00000170099	NA	NA	NA	NA	NA	14q32.13	NA	NA	NA	NA	rs11160169	0.58	0.58	0.558	0.591254	0.4364	0.9325	0.6772	0.3835	0.6186	0.42	0.91	0.65	0.37	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.218758	NA	NA	NA	NA	NA	0.529	NA	3.5636
1296	19	2873439	2873439	C	T	intronic	ZNF556	NA	NA	NA	intronic	ENSG00000172000	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs9304900	0.4	0.4	0.423	0.441094	0.4364	0.121	0.33	0.7352	0.4571	0.44	0.1	0.33	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.087322	NA	NA	NA	NA	NA	0.413	NA	3.5636
1296	1	228494382	228494382	T	C	intronic	OBSCN	NA	NA	NA	intronic	ENSG00000154358	NA	NA	NA	NA	NA	1q42.13	NA	NA	NA	NA	rs1150911	0.55	0.55	NA	0.321486	0.1869	0.497	0.2983	0.4175	0.1656	0.39	0.66	0.51	0.73	0.2496	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.543058	NA	NA	NA	NA	NA	0.319	NA	3.5635
1296	3	9831680	9831680	G	C	intronic	TADA3	NA	NA	NA	intronic	ENSG00000171148	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs293791	0.14	0.14	0.125	0.141973	0.1183	0.0466	0.1254	0.2572	0.1207	0.13	0.06	0.13	0.28	0.1588	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.493037	NA	NA	0.159403	0.246588	NA	0.138	NA	3.563497
1296	3	171452645	171452645	A	G	intronic	PLD1	NA	NA	NA	intronic	ENSG00000075651	NA	NA	NA	NA	NA	3q26.31	NA	NA	NA	NA	rs9869368	0.12	0.12	0.123	0.14976	0.1402	0.129	0.085	0.143	0.2362	0.13	0.12	0.1	0.13	0.145	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.38308	NA	NA	0.151395	0.120744	NA	0.167	NA	3.563405
1296	X	2638499	2638499	G	A	intronic	CD99	NA	NA	NA	intronic	ENSG00000002586	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs5939113	0.21	0.21	0.18919	NA	NA	NA	NA	NA	NA	0.2	0.07	0.27	0.36	0.2344	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.509288	NA	NA	0.202281	0.396278	NA	0.217	NA	3.563319
1296	12	32134240	32134240	C	T	exonic	KIAA1551	NA	synonymous SNV	KIAA1551:NM_018169:exon4:c.C351T:p.N117N	exonic	ENSG00000174718	NA	synonymous SNV	ENSG00000174718:ENST00000381054:exon3:c.C351T:p.N117N,ENSG00000174718:ENST00000312561:exon4:c.C351T:p.N117N	NA	NA	12p11.21	NA	NA	NA	NA	rs2388982	0.74	0.74	0.734	0.725839	0.6928	0.7827	0.7608	0.7118	0.6953	0.7	0.8	0.75	0.72	0.7174	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.223232	NA	NA	0.693488	0.705629	NA	0.667	NA	3.5629786
1296	2	70915134	70915134	C	G	intronic	ADD2	NA	NA	NA	ncRNA_intronic	ENSG00000235035	NA	NA	NA	NA	NA	2p13.3	NA	NA	NA	NA	rs2074820	0.35	0.35	0.328	0.342652	0.2515	0.4345	0.2464	0.4274	0.2955	0.27	0.4	0.3	0.46	0.2755	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.592374	NA	NA	0.243488	0.388788	NA	0.377	NA	3.5628453
1296	3	37176116	37176116	A	G	intronic	LRRFIP2	NA	NA	NA	intronic	ENSG00000093167	NA	NA	NA	NA	NA	3p22.2	NA	NA	NA	NA	rs9832423	0.3	0.3	0.286	0.24381	0.4374	0.0774	0.3559	0.1959	0.2014	0.45	0.09	0.41	0.23	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.289258	NA	NA	NA	NA	NA	0.362	NA	3.5626
1296	3	108271012	108271012	T	C	intronic	KIAA1524	NA	NA	NA	intronic	ENSG00000163507	NA	NA	NA	NA	NA	3q13.13	NA	NA	NA	NA	rs2305514	0.42	0.42	0.386	0.369609	0.4374	0.5268	0.3689	0.2292	0.3282	0.44	0.59	0.39	0.22	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.497346	NA	NA	NA	NA	NA	0.341	NA	3.5626
1296	16	58614733	58614733	C	T	intronic	CNOT1	NA	NA	NA	intronic	ENSG00000125107	NA	NA	NA	NA	NA	16q21	NA	NA	NA	NA	rs72790275	0.26	0.26	0.233	0.230831	0.4374	0.0456	0.2896	0.1974	0.2127	0.42	0.04	0.3	0.22	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.675219	NA	NA	NA	NA	NA	0.261	NA	3.5626
1296	17	63996851	63996851	A	G	intronic	CEP112	NA	NA	NA	intronic	ENSG00000154240	NA	NA	NA	NA	NA	17q24.1	NA	NA	NA	NA	rs11654306	0.54	0.54	0.497	0.536342	0.4374	0.875	0.6585	0.233	0.6125	0.44	0.87	0.63	0.24	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.589575	NA	NA	NA	NA	NA	0.478	NA	3.5626
1296	17	80622483	80622483	G	T	intronic	RAB40B	NA	NA	NA	intronic	ENSG00000141542	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs74002927	0.18	0.18	0.145	0.186502	0.1402	0.2391	0.2118	0.1097	0.2658	0.14	0.24	0.23	0.14	0.1565	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.979384	NA	NA	0.140814	0.112574	NA	0.109	NA	3.562486
1296	15	74177250	74177250	C	T	intronic	TBC1D21	NA	NA	NA	intronic	ENSG00000167139	NA	NA	NA	NA	NA	15q24.1	NA	NA	NA	NA	rs35697698	0.07	0.07	0.052	0.0591054	0.1581	0.0139	0.0548	0.0098	0.0736	0.16	0.02	0.06	0.01	0.1164	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.146114	NA	NA	0.163021	0.035259	NA	0.029	NA	3.562479
1296	3	149039324	149039324	G	A	intronic	TM4SF18	NA	NA	NA	ncRNA_intronic	ENSG00000244468	NA	NA	NA	NA	NA	3q25.1	NA	NA	NA	NA	rs2015626	0.2	0.2	0.165	0.185503	0.2783	0.0238	0.3242	0.2065	0.1299	0.28	0.03	0.34	0.17	0.2358	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.553479	NA	NA	0.257273	0.206724	NA	0.246	NA	3.5619603
1296	19	42373298	42373298	G	A	intronic	RPS19	NA	NA	NA	intronic	ENSG00000105372	NA	NA	NA	NA	NA	19q13.2	NA	Name=Pol2-4H8	NA	NA	rs1366610	0.56	0.56	0.567	0.558706	0.4622	0.5079	0.5461	0.767	0.4376	0.48	0.55	0.49	0.74	0.4962	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.100688	NA	NA	0.479646	0.701089	NA	0.58	NA	3.561954
1296	9	21179174	21179174	A	G	intergenic	IFNA21,IFNA4	dist=12515;dist=7444	NA	NA	ncRNA_exonic	ENSG00000232281	NA	NA	NA	NA	NA	9p21.3	NA	NA	NA	NA	rs2019226	0.38	0.38	0.368	0.40655	0.4384	0.3641	0.3991	0.2791	0.5951	0.44	0.34	0.42	0.29	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.117699	NA	NA	NA	NA	NA	0.37	NA	3.5616
1296	11	130773076	130773076	G	A	intronic	SNX19	NA	NA	NA	intronic	ENSG00000120451	NA	NA	NA	NA	NA	11q24.3	NA	NA	NA	NA	rs3751039	0.47	0.47	0.457	0.531949	0.4384	0.4812	0.6009	0.4977	0.6779	0.44	0.44	0.56	0.49	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.064793	NA	NA	NA	NA	NA	0.362	NA	3.5616
1296	12	21627672	21627672	C	G	intronic	RECQL	NA	NA	NA	intronic	ENSG00000004700	NA	NA	NA	NA	NA	12p12.1	NA	NA	NA	NA	rs35159698	0.45	0.45	0.417	0.445088	0.4384	0.5238	0.4726	0.3805	0.4387	0.44	0.52	0.46	0.38	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.196603	NA	NA	NA	NA	NA	0.522	NA	3.5616
1296	16	8868640	8868640	C	T	intronic	ABAT	NA	NA	NA	intronic	ENSG00000183044	NA	NA	NA	NA	NA	16p13.2	NA	NA	NA	NA	rs1641021	0.34	0.34	0.306	0.31849	0.4384	0.4177	0.3429	0.0552	0.4315	0.42	0.43	0.36	0.08	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.132845	NA	NA	NA	NA	NA	0.254	NA	3.5616
1296	9	95887154	95887154	G	A	intronic	NINJ1	NA	NA	NA	intronic	ENSG00000131669	NA	NA	NA	NA	NA	9q22.31	NA	NA	NA	NA	rs13298119	0.12	0.12	0.126	0.102037	0.1551	0.005	0.0634	0.2042	0.0368	0.16	0.0017	0.08	0.23	0.1349	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.259977	NA	NA	0.148488	0.192692	NA	0.13	NA	3.561512
1296	1	151380727	151380727	A	G	intronic	POGZ	NA	NA	NA	intronic	ENSG00000143442	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs2025899	0.07	0.07	0.047	0.0740815	0.1103	0.0387	0.0965	0.0325	0.1135	0.1	0.03	0.1	0.02	0.2057	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.420611	NA	NA	0.122558	0.045847	NA	0.051	NA	3.561442
1296	1	236187365	236187365	T	C	intronic	NID1	NA	NA	NA	intronic	ENSG00000116962	NA	NA	NA	NA	NA	1q42.3	NA	NA	NA	NA	rs3738533	0.2	0.2	0.154	0.234824	0.1193	0.2728	0.3343	0.2103	0.2771	0.1	0.28	0.27	0.21	0.1934	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.003397	NA	NA	0.126047	0.200409	NA	0.181	NA	3.561253
1296	9	135470176	135470176	C	G	UTR3	DDX31	NM_022779:c.*77G>C	NA	NA	UTR3	ENSG00000125485	ENST00000372159:c.*77G>C,ENST00000372153:c.*77G>C,ENST00000438527:c.*77G>C	NA	NA	NA	NA	9q34.13	NA	NA	NA	NA	rs306549	0.79	0.79	0.79	0.822284	0.7724	0.7014	0.8401	0.9387	0.8282	0.78	0.68	0.82	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.148216	NA	NA	NA	NA	NA	0.848	NA	3.5609334
1296	7	130150019	130150019	G	A	intronic	COPG2	NA	NA	NA	intergenic	ENSG00000158623,ENSG00000239021	dist=1519;dist=137653	NA	NA	NA	NA	7q32.2	NA	NA	NA	NA	rs17333054	0.02	0.02	0.014	0.0161741	0.0368	0.001	0.0187	0.0008	0.0297	0.04	NA	0.02	0.002	0.0305	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.208846	NA	NA	0.038526	0.00838	NA	0.007	NA	3.5608407
1296	6	11723538	11723538	A	G	intronic	ADTRP	NA	NA	NA	intronic	ENSG00000111863	NA	NA	NA	NA	NA	6p24.1	NA	Name=Pol2-4H8,TAF1	Name=5	NA	rs210905	0.87	0.87	0.873	0.889976	0.7942	1	0.8847	0.8828	0.8885	0.78	1	0.87	0.86	0.8431	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.558814	NA	NA	0.802093	0.878348	NA	0.725	NA	3.560607
1296	5	1232775	1232775	T	A	intronic	SLC6A18	NA	NA	NA	intronic	ENSG00000164363	NA	NA	NA	NA	NA	5p15.33	NA	NA	NA	NA	rs6858999	0.38	0.38	0.37	0.362819	0.4394	0.2183	0.4539	0.3782	0.3476	0.42	0.24	0.44	0.43	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.791446	NA	NA	NA	NA	NA	0.326	NA	3.5606
1296	10	26417531	26417531	T	G	intronic	MYO3A	NA	NA	NA	intronic	ENSG00000095777	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs17739425	0.35	0.35	0.346	0.365415	0.4394	0.2937	0.2911	0.3404	0.4499	0.45	0.29	0.28	0.34	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.906889	NA	NA	NA	NA	NA	0.42	NA	3.5606
1296	11	35456453	35456453	G	C	intronic	PAMR1	NA	NA	NA	intronic	ENSG00000149090	NA	NA	NA	NA	NA	11p13	NA	NA	NA	NA	rs675227	0.43	0.43	0.457	0.433506	0.4394	0.25	0.487	0.649	0.2873	0.43	0.26	0.43	0.64	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.317319	NA	NA	NA	NA	NA	0.529	NA	3.5606
1296	11	64977644	64977644	C	T	intronic	CAPN1	NA	NA	NA	intronic	ENSG00000014216	NA	NA	NA	NA	NA	11q13.1	NA	NA	NA	NA	rs625750	0.35	0.35	0.367	0.311701	0.4394	0.4286	0.2824	0.1036	0.362	0.44	0.43	0.35	0.11	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.295363	NA	NA	NA	NA	NA	0.283	NA	3.5606
1296	12	31254642	31254642	T	A	intronic	DDX11	NA	NA	NA	intronic	ENSG00000013573	NA	NA	NA	NA	NA	12p11.21	NA	NA	NA	NA	rs7952861	0.63	0.63	0.544	0.633986	0.4394	0.8065	0.611	0.708	0.5726	0.43	0.81	0.59	0.74	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.225871	NA	NA	NA	NA	NA	0.029	NA	3.5606
1296	15	65110391	65110391	C	T	intronic	PIF1	NA	NA	NA	intronic	ENSG00000140451	NA	NA	NA	NA	NA	15q22.31	NA	NA	NA	NA	rs55945924	0.25	0.25	0.226	0.208866	0.4394	0.0565	0.2392	0.1596	0.1738	0.44	0.05	0.27	0.18	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.346618	NA	NA	NA	NA	NA	0.312	NA	3.5606
1296	20	25459919	25459919	G	A	intronic	NINL	NA	NA	NA	intronic	ENSG00000101004	NA	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	rs84816	0.56	0.56	0.553	0.538738	0.4394	0.9067	0.3516	0.4584	0.5031	0.44	0.93	0.36	0.46	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.937293	NA	NA	NA	NA	NA	0.471	NA	3.5606
1296	20	41076751	41076751	T	A	intronic	PTPRT	NA	NA	NA	intronic	ENSG00000196090	NA	NA	NA	NA	NA	20q12	NA	NA	NA	NA	rs2076082	0.49	0.49	0.509	0.519569	0.4394	0.4593	0.4092	0.6846	0.5194	0.44	0.48	0.45	0.63	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.387513	NA	NA	NA	NA	NA	0.522	NA	3.5606
1296	12	6458274	6458274	G	C	intronic	SCNN1A	NA	NA	NA	intronic	ENSG00000111319	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs3764874	0.17	0.17	0.169	0.186901	0.2127	0.122	0.1369	0.149	0.3139	0.22	0.12	0.18	0.15	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.052515	NA	NA	0.226901	0.135838	NA	0.167	NA	3.560399
1296	9	4576774	4576774	G	A	intronic	SLC1A1	NA	NA	NA	intronic	ENSG00000106686,ENSG00000106688	NA	NA	NA	NA	NA	9p24.2	NA	NA	NA	NA	rs1471786	0.23	0.23	0.183	0.202077	0.1521	0.3988	0.2277	0.1165	0.1483	0.16	0.4	0.24	0.13	0.1674	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.552863	3.552863	NA	0.120233	0.124376	NA	0.181	NA	3.560267
1296	22	41903743	41903743	G	T	intronic	ACO2	NA	NA	NA	intronic	ENSG00000100412	NA	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs2076199	0.46	0.46	0.41	0.50619	0.2326	0.5714	0.5749	0.6808	0.4356	0.22	0.52	0.55	0.68	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.252964	NA	NA	0.207433	0.581621	NA	0.514	NA	3.559967
1296	19	41386171	41386171	G	C	intronic	CYP2A7	NA	NA	NA	intronic	ENSG00000198077,ENSG00000268797	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs73032316	0.14	0.14	0.117	0.114417	0.1451	0.1806	0.0821	0.0802	0.0838	0.15	0.19	0.09	0.1	0.1361	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.975425	NA	NA	0.158837	0.092374	NA	0.109	NA	3.559963
1296	14	71064314	71064314	C	T	intronic	MED6	NA	NA	NA	ncRNA_intronic	ENSG00000259115	NA	NA	NA	NA	NA	14q24.2	NA	NA	NA	NA	rs1007402	0.44	0.44	0.489	0.442891	0.2485	0.5635	0.2594	0.7095	0.2883	0.24	0.56	0.28	0.73	0.2982	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.284303	1.284303	NA	0.226913	0.620744	NA	0.478	NA	3.5597203
1296	19	39760336	39760336	T	G	intronic	IFNL2	NA	NA	NA	intronic	ENSG00000183709	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs58736064	0.18	0.18	0.123	0.240415	0.2157	0.0853	0.2305	0.2905	0.365	0.19	0.07	0.24	0.24	0.2246	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.855473	NA	NA	NA	NA	NA	0.21	NA	3.5597
1296	1	24413427	24413427	T	G	intronic	MYOM3	NA	NA	NA	intronic	ENSG00000142661	NA	NA	NA	NA	NA	1p36.11	NA	NA	NA	NA	rs6686608	0.39	0.39	0.364	0.353834	0.4404	0.4782	0.3386	0.2799	0.2474	0.45	0.46	0.33	0.24	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.441534	NA	NA	NA	NA	NA	0.275	NA	3.5596
1296	1	38166327	38166327	A	T	intronic	CDCA8	NA	NA	NA	intronic	ENSG00000134690	NA	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	rs661460	0.54	0.54	0.529	0.538339	0.4404	0.7034	0.5058	0.5325	0.5	0.45	0.7	0.48	0.55	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.100361	NA	NA	NA	NA	NA	0.572	NA	3.5596
1296	3	2967186	2967186	A	G	intronic	CNTN4	NA	NA	NA	intronic	ENSG00000144619	NA	NA	NA	NA	NA	3p26.2	NA	NA	NA	NA	rs1967176	0.49	0.49	0.419	0.466454	0.4404	0.7143	0.5086	0.2595	0.4877	0.44	0.71	0.52	0.27	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.73653	NA	NA	NA	NA	NA	0.507	NA	3.5596
1296	3	46723663	46723663	C	T	intronic	ALS2CL	NA	NA	NA	intronic	ENSG00000178038	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs4683311	0.34	0.34	0.284	0.321685	0.4404	0.3393	0.4236	0.0983	0.411	0.44	0.33	0.43	0.12	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.152629	NA	NA	NA	NA	NA	0.261	NA	3.5596
1296	3	184766186	184766186	A	C	intronic	VPS8	NA	NA	NA	intronic	ENSG00000156931	NA	NA	NA	NA	NA	3q27.2	NA	NA	NA	NA	rs3821749	0.53	0.53	0.512	0.551717	0.4404	0.6667	0.4914	0.5454	0.5992	0.46	0.64	0.52	0.52	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.415618	NA	NA	NA	NA	NA	0.536	NA	3.5596
1296	7	29591612	29591612	T	C	intergenic	CHN2,PRR15	dist=37668;dist=11815	NA	NA	ncRNA_exonic	ENSG00000270196	NA	NA	NA	NA	NA	7p14.3	NA	NA	NA	NA	rs10499584	0.36	0.36	0.359	0.338259	0.4404	0.2867	0.2939	0.3722	0.272	0.42	0.3	0.35	0.35	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.060637	NA	NA	NA	NA	NA	0.428	NA	3.5596
1296	8	97270991	97270991	G	A	intronic	MTERFD1	NA	NA	NA	intronic	ENSG00000156469	NA	NA	NA	NA	NA	8q22.1	NA	NA	NA	NA	rs2319603	0.39	0.39	0.353	0.379393	0.4404	0.1825	0.3501	0.5371	0.3272	0.46	0.2	0.33	0.52	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.438058	NA	NA	NA	NA	NA	0.457	NA	3.5596
1296	10	127524612	127524612	C	T	intronic	BCCIP	NA	NA	NA	intronic	ENSG00000107949	NA	NA	NA	NA	NA	10q26.2	NA	NA	NA	NA	rs4075326	0.42	0.42	0.426	0.44349	0.4404	0.3145	0.3473	0.5666	0.4816	0.44	0.32	0.37	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.234469	NA	NA	NA	NA	ID=COSN163814;OCCURENCE=1(breast)	0.435	NA	3.5596
1296	19	1507483	1507483	T	C	intronic	ADAMTSL5	NA	NA	NA	intronic	ENSG00000185761	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs791460	0.39	0.39	0.399	0.372804	0.4404	0.3879	0.2983	0.3313	0.3967	0.44	0.41	0.31	0.35	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.268966	1.268966	NA	NA	NA	NA	0.42	NA	3.5596
1296	20	44663475	44663475	T	C	intronic	SLC12A5	NA	NA	NA	intronic	ENSG00000124140	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs11699481	0.21	0.21	0.179	0.179313	0.4404	NA	0.2882	0.0484	0.1953	0.42	NA	0.32	0.04	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.549069	NA	NA	NA	NA	NA	0.261	NA	3.5596
1296	20	50225235	50225235	G	A	intronic	ATP9A	NA	NA	NA	intronic	ENSG00000054793	NA	NA	NA	NA	NA	20q13.2	NA	NA	NA	NA	rs6021312	0.42	0.42	0.415	0.433506	0.4404	0.2212	0.5749	0.5953	0.3262	0.43	0.26	0.53	0.53	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.072903	NA	NA	NA	NA	NA	0.341	NA	3.5596
1296	16	20627733	20627733	A	G	intergenic	ACSM2B,ACSM1	dist=40038;dist=6826	NA	NA	intronic	ENSG00000005187	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs7191240	0.22	0.22	0.239	0.244808	0.1074	0.1389	0.1369	0.5106	0.2127	0.11	0.16	0.15	0.49	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.304261	NA	NA	NA	NA	NA	0.304	NA	3.5592667
1296	19	56719708	56719708	G	A	intergenic	ZSCAN5B,ZSCAN5A	dist=15287;dist=12971	NA	NA	intronic	ENSG00000204532	NA	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs62120859	0.05	0.05	0.032	0.0323482	0.1074	0.001	0.049	0.0053	0.0123	0.11	NA	0.05	0.002	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.773267	NA	NA	NA	NA	NA	0.058	NA	3.5592667
1296	2	210889759	210889759	A	G	intronic	KANSL1L	NA	NA	NA	intronic	ENSG00000144445	NA	NA	NA	NA	NA	2q34	NA	NA	NA	NA	rs6435550	0.42	0.42	0.433	0.418331	0.4414	0.5357	0.3473	0.3638	0.3978	0.43	0.51	0.39	0.34	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.289833	NA	NA	NA	NA	NA	0.42	NA	3.5586
1296	1	55266845	55266845	C	T	UTR5	TTC22	NM_001114108:c.-9G>A,NM_017904:c.-9G>A	NA	NA	UTR5	ENSG00000006555	ENST00000371276:c.-9G>A,ENST00000371274:c.-9G>A	NA	NA	NA	NA	1p32.3	NA	Name=YY1_(C-20),Pol2	NA	NA	rs1147984	0.48	0.48	0.491	0.4998	0.5964	0.2788	0.4611	0.4985	0.6575	0.6	0.29	0.49	0.52	0.5682	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.309613	1.309613	NA	0.610391	0.517377	NA	0.572	NA	3.5583424
1296	9	137020431	137020431	A	G	intronic	WDR5	NA	NA	NA	intronic	ENSG00000196363	NA	NA	NA	NA	NA	9q34.2	NA	NA	NA	NA	rs28620999	0.16	0.16	0.143	0.152955	0.16	0.0149	0.1182	0.3419	0.0573	0.16	0.02	0.15	0.33	0.1371	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.701882	NA	NA	0.144651	0.320018	NA	0.21	NA	3.558249
1296	12	117494587	117494587	G	C	intronic	TESC	NA	NA	NA	intronic	ENSG00000088992	NA	NA	NA	NA	NA	12q24.22	NA	NA	NA	NA	rs2173653	0.18	0.18	0.186	0.195288	0.1571	0.0367	0.0994	0.4402	0.135	0.16	0.03	0.11	0.42	0.1493	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.240818	NA	NA	0.135698	0.394008	NA	0.167	NA	3.557902
1296	7	2962241	2962241	G	A	intronic	CARD11	NA	NA	NA	intronic	ENSG00000198286	NA	NA	NA	NA	NA	7p22.2	NA	NA	NA	NA	rs3735130	0.22	0.22	0.235	0.244209	0.1382	0.4028	0.1052	0.2579	0.2699	0.13	0.38	0.1	0.25	0.1677	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.13237	NA	NA	0.136279	0.224467	NA	0.159	NA	3.557821
1296	3	16364846	16364846	C	T	intronic	RFTN1	NA	NA	NA	intronic	ENSG00000131378,ENSG00000154814	NA	NA	NA	NA	NA	3p25.1	NA	NA	NA	NA	rs59223456	0.19	0.19	0.224	0.198283	0.1551	0.0258	0.1124	0.5212	0.045	0.15	0.02	0.12	0.5	0.1439	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.777394	NA	NA	0.143256	0.446412	NA	0.268	NA	3.557744
1296	1	226050609	226050609	C	A	intronic	TMEM63A	NA	NA	NA	intronic	ENSG00000196187	NA	NA	NA	NA	NA	1q42.12	NA	NA	NA	NA	rs10158985	0.12	0.12	0.102	0.105032	0.2207	0.005	0.1297	0.0582	0.135	0.22	0.0017	0.15	0.06	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.314945	NA	NA	0.221559	0.078757	NA	0.138	NA	3.557741
1296	3	100270804	100270804	T	C	intronic	TMEM45A	NA	NA	NA	intronic	ENSG00000181458	NA	NA	NA	NA	NA	3q12.2	NA	NA	NA	NA	rs4928065	0.35	0.35	0.326	0.309704	0.4423	0.3185	0.379	0.2057	0.2556	0.45	0.33	0.41	0.18	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.545005	NA	NA	NA	NA	NA	0.406	NA	3.5577
1296	4	166243082	166243082	A	G	intronic	KLHL2	NA	NA	NA	intronic	ENSG00000109466	NA	NA	NA	NA	NA	4q32.3	NA	NA	NA	NA	rs60759634	0.37	0.37	0.377	0.341454	0.4423	0.2847	0.2709	0.4735	0.1677	0.43	0.26	0.32	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.264537	NA	NA	NA	NA	NA	0.326	NA	3.5577
1296	5	1219859	1219859	C	T	intronic	SLC6A19	NA	NA	NA	intronic	ENSG00000174358	NA	NA	NA	NA	NA	5p15.33	NA	NA	NA	NA	rs11746371	0.35	0.35	0.33	0.325879	0.4423	0.2173	0.4481	0.2466	0.3384	0.43	0.24	0.44	0.28	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.007071	NA	NA	NA	NA	NA	0.319	NA	3.5577
1296	5	1330253	1330253	T	C	intronic	CLPTM1L	NA	NA	NA	intronic	ENSG00000049656	NA	NA	NA	NA	NA	5p15.33	NA	NA	NA	NA	rs452932	0.39	0.39	0.391	0.367013	0.4423	0.1905	0.3112	0.6036	0.1912	0.46	0.16	0.35	0.59	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.142084	NA	NA	NA	NA	NA	0.413	NA	3.5577
1296	5	137903084	137903084	A	G	intronic	HSPA9	NA	NA	NA	intronic	ENSG00000113013	NA	NA	NA	NA	NA	5q31.2	NA	NA	NA	NA	rs256014	0.61	0.61	0.641	0.648962	0.4423	0.7937	0.3761	0.826	0.6667	0.44	0.81	0.37	0.81	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.098249	NA	NA	NA	NA	NA	0.63	NA	3.5577
1296	10	26436287	26436287	G	T	intronic	MYO3A	NA	NA	NA	intronic	ENSG00000095777	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs2368158	0.39	0.39	0.387	0.395168	0.4423	0.3512	0.3833	0.3533	0.4571	0.45	0.37	0.35	0.35	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.032291	NA	NA	NA	NA	NA	0.435	NA	3.5577
1296	10	127484543	127484543	G	C	intronic	UROS	NA	NA	NA	intronic	ENSG00000188690	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs2281956	0.38	0.38	0.394	0.396965	0.4423	0.3006	0.3372	0.438	0.4366	0.44	0.31	0.36	0.41	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.486777	1.486777	NA	NA	NA	NA	0.384	NA	3.5577
1296	17	74084737	74084737	T	C	intronic	EXOC7	NA	NA	NA	intronic	ENSG00000182473	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs2246632	0.47	0.47	0.478	0.533946	0.4423	0.5169	0.3703	0.5946	0.68	0.44	0.47	0.36	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.898987	NA	NA	NA	NA	NA	0.413	NA	3.5577
1296	17	74090385	74090385	G	A	intronic	EXOC7	NA	NA	NA	intronic	ENSG00000182473	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs2243538	0.47	0.47	0.487	0.534145	0.4423	0.5169	0.3718	0.5946	0.68	0.44	0.47	0.36	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.082158	NA	NA	NA	NA	NA	0.413	NA	3.5577
1296	20	33529766	33529766	T	G	intronic	GSS	NA	NA	NA	intronic	ENSG00000100983	NA	NA	NA	NA	NA	20q11.22	NA	NA	NA	NA	rs2273684	0.46	0.46	0.466	0.466853	0.4423	0.2252	0.3429	0.7814	0.4039	0.46	0.24	0.4	0.75	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.048454	NA	NA	NA	NA	NA	0.616	NA	3.5577
1296	4	17841848	17841848	A	C	intronic	NCAPG	NA	NA	NA	intronic	ENSG00000109805	NA	NA	NA	NA	NA	4p15.31	NA	NA	NA	NA	rs2286535	0.18	0.18	0.171	0.225639	0.1133	0.1627	0.1484	0.3487	0.2945	0.12	0.12	0.15	0.37	0.1714	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.504334	NA	NA	0.157619	0.322177	NA	0.254	NA	3.557681
1296	7	2697881	2697881	G	T	intronic	TTYH3	NA	NA	NA	intronic	ENSG00000136295	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs2302342	0.14	0.14	0.126	0.123802	0.1272	0.0873	0.1571	0.1596	0.0859	0.12	0.1	0.19	0.17	0.1916	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.051826	NA	NA	0.123572	0.121511	NA	0.145	NA	3.557628
1296	19	7812181	7812181	G	C	intronic	CD209	NA	NA	NA	intronic	ENSG00000090659	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs7252229	0.18	0.18	0.202	0.198882	0.16	0.0655	0.098	0.4463	0.1135	0.16	0.05	0.1	0.41	0.1465	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.691618	NA	NA	0.136163	0.39537	NA	0.261	NA	3.557337
1296	11	118416253	118416253	C	T	intronic	IFT46,TMEM25	NA	NA	NA	intronic	ENSG00000118096,ENSG00000149582	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs2277295	0.23	0.23	0.206	0.257588	0.1322	0.5427	0.0778	0.1672	0.3425	0.13	0.51	0.09	0.15	0.1801	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.437996	NA	NA	0.130733	0.159318	NA	0.181	NA	3.556967
1296	3	41977464	41977464	A	C	intronic	ULK4	NA	NA	NA	intronic	ENSG00000168038	NA	NA	NA	NA	NA	3p22.1	NA	NA	NA	NA	rs73071203	0.09	0.09	0.084	0.0838658	0.169	0.002	0.0951	0.0613	0.1033	0.18	0.0035	0.1	0.06	0.1244	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.827511	NA	NA	0.149786	0.071886	NA	0.123	NA	3.556814
1296	3	100287901	100287901	T	G	intronic	TMEM45A	NA	NA	NA	intronic	ENSG00000181458	NA	NA	NA	NA	NA	3q12.2	NA	NA	NA	NA	rs6763638	0.5	0.5	0.518	0.476038	0.4433	0.3323	0.4251	0.8026	0.2526	0.46	0.34	0.44	0.81	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.7789	NA	NA	NA	NA	NA	0.652	NA	3.5567
1296	11	119004009	119004009	G	T	intronic	HINFP	NA	NA	NA	intronic	ENSG00000172273	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs672189	0.44	0.44	0.408	0.401957	0.4433	0.7183	0.2824	0.1694	0.4325	0.44	0.74	0.33	0.18	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.304294	NA	NA	NA	NA	NA	0.37	NA	3.5567
1296	11	119004026	119004026	C	T	intronic	HINFP	NA	NA	NA	intronic	ENSG00000172273	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs537153	0.44	0.44	0.44	0.401757	0.4433	0.7183	0.2824	0.1687	0.4325	0.44	0.74	0.33	0.18	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.704204	NA	NA	NA	NA	NA	0.37	NA	3.5567
1296	17	28505024	28505024	G	A	intronic	NSRP1	NA	NA	NA	intronic	ENSG00000126653	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs7221154	0.59	0.59	0.587	0.582268	0.4433	0.8224	0.5634	0.5371	0.5521	0.45	0.83	0.55	0.57	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.005166	NA	NA	NA	NA	NA	0.725	NA	3.5567
1296	22	40816749	40816749	G	A	intronic	MKL1	NA	NA	NA	intronic	ENSG00000196588	NA	NA	NA	NA	NA	22q13.1	NA	NA	NA	NA	rs2072856	0.35	0.35	0.382	0.407348	0.4433	0.1022	0.2853	0.562	0.5624	0.45	0.09	0.3	0.53	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.313151	NA	NA	NA	NA	NA	0.486	NA	3.5567
1296	14	24646469	24646469	T	C	intronic	REC8	NA	NA	NA	intronic	ENSG00000100918	NA	NA	NA	NA	NA	14q12	NA	NA	NA	NA	rs17199551	0.15	0.15	0.115	0.145966	0.1312	0.1032	0.3285	0.1021	0.135	0.14	0.14	0.27	0.1	0.1645	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.9029	NA	NA	0.147606	0.0966	ID=COSN164644;OCCURENCE=1(breast)	0.13	NA	3.556694
1296	19	10675564	10675564	C	T	intronic	KRI1	NA	NA	NA	intronic	ENSG00000129347	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs3745247	0.14	0.14	0.125	0.126597	0.166	0.1438	0.1066	0.0734	0.1544	0.16	0.15	0.14	0.09	0.1357	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.650143	NA	NA	0.141628	0.083069	NA	0.181	NA	3.556672
1296	1	241920562	241920562	C	T	intronic	WDR64	NA	NA	NA	intronic	ENSG00000162843	NA	NA	NA	NA	NA	1q43	NA	NA	NA	NA	rs6663895	0.12	0.12	0.122	0.102436	0.1541	0.003	0.1196	0.1921	0.0184	0.14	0.0035	0.14	0.19	0.1259	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.112323	NA	NA	0.163605	0.187699	NA	0.21	NA	3.556395
1296	11	60285528	60285528	T	G	intronic	MS4A13	NA	NA	NA	intronic	ENSG00000204979	NA	NA	NA	NA	NA	11q12.2	NA	NA	NA	NA	rs10897078	0.24	0.24	0.225	0.275559	0.1213	0.2798	0.3141	0.3404	0.3149	0.12	0.28	0.3	0.32	0.1904	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.461884	NA	NA	0.132387	0.318202	ID=COSN163966;OCCURENCE=1(breast)	0.217	NA	3.555913
1296	6	152782628	152782628	C	T	intronic	SYNE1	NA	NA	NA	intronic	ENSG00000131018	NA	NA	NA	NA	NA	6q25.2	NA	NA	NA	NA	rs506181	0.58	0.58	0.6	0.602436	0.4443	0.747	0.3775	0.7927	0.5184	0.43	0.74	0.4	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.919009	NA	NA	NA	NA	NA	0.587	NA	3.5557
1296	7	150327024	150327024	C	T	intronic	GIMAP6	NA	NA	NA	intronic	ENSG00000133561	NA	NA	NA	NA	NA	7q36.1	NA	NA	NA	NA	rs3735082	0.44	0.44	0.434	0.402756	0.4443	0.503	0.3732	0.323	0.3855	0.45	0.54	0.41	0.33	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.336918	NA	NA	NA	NA	NA	0.435	NA	3.5557
1296	10	5174693	5174693	A	G	intergenic	AKR1C3,AKR1CL1	dist=24815;dist=21962	NA	NA	ncRNA_intronic	ENSG00000225418	NA	NA	NA	NA	NA	10p15.1	NA	NA	NA	NA	rs11252988	0.29	0.29	0.306	0.271565	0.4443	0.001	0.2622	0.4244	0.1728	0.43	0.0017	0.3	0.42	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.274415	NA	NA	NA	NA	NA	0.341	NA	3.5557
1296	10	5174707	5174707	C	T	intergenic	AKR1C3,AKR1CL1	dist=24829;dist=21948	NA	NA	ncRNA_intronic	ENSG00000225418	NA	NA	NA	NA	NA	10p15.1	NA	NA	NA	NA	rs11252989	0.29	0.29	0.298	0.271565	0.4443	0.001	0.2622	0.4244	0.1728	0.43	0.0017	0.3	0.42	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.012061	NA	NA	NA	NA	NA	0.341	NA	3.5557
1296	10	5177308	5177308	C	T	intergenic	AKR1C3,AKR1CL1	dist=27430;dist=19347	NA	NA	ncRNA_intronic	ENSG00000225418	NA	NA	NA	NA	NA	10p15.1	NA	NA	NA	NA	rs7100514	0.3	0.3	0.307	0.271965	0.4443	0.001	0.2637	0.4251	0.1728	0.43	0.0017	0.3	0.42	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.018138	NA	NA	NA	NA	NA	0.341	NA	3.5557
1296	11	102567626	102567626	C	G	intronic	MMP27	NA	NA	NA	intronic	ENSG00000137675	NA	NA	NA	NA	NA	11q22.2	NA	NA	NA	NA	rs1940480	0.43	0.43	0.413	0.437899	0.4443	0.629	0.5043	0.174	0.544	0.45	0.59	0.47	0.17	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.323768	NA	NA	NA	NA	NA	0.449	NA	3.5557
1296	3	108366978	108366978	A	G	intronic	DZIP3	NA	NA	NA	UTR3	ENSG00000198919	ENST00000495008:c.*1055A>G	NA	NA	NA	NA	3q13.13	NA	NA	NA	NA	rs2399235	0.22	0.22	0.226	0.245807	0.1879	0.4554	0.2637	0.0552	0.3344	0.2	0.39	0.24	0.04	0.235	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.24023	1.24023	NA	0.188431	0.082726	ID=COSN166964;OCCURENCE=1(large_intestine)	0.138	NA	3.5553357
1297	19	8642160	8642160	T	C	intronic	MYO1F	NA	NA	NA	intronic	ENSG00000142347	NA	NA	NA	NA	NA	19p13.2	NA	Name=Pol2	NA	NA	rs4542783	0.59	0.59	0.578	0.58766	0.4712	0.7401	0.5807	0.6104	0.5245	0.46	0.76	0.57	0.59	0.5272	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.22612	NA	NA	0.446654	0.562829	NA	0.572	NA	3.554946
1297	17	33463568	33463568	C	T	intronic	NLE1	NA	NA	NA	intronic	ENSG00000073536	NA	NA	NA	NA	NA	17q12	NA	NA	Name=2	NA	rs3736143	0.56	0.56	0.524	0.566693	0.4533	0.7857	0.598	0.4418	0.6043	0.47	0.79	0.58	0.42	0.5222	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.39442	NA	NA	0.469684	0.453278	NA	0.442	NA	3.554816
1297	1	150958977	150958977	T	C	intronic	ANXA9	NA	NA	NA	intronic	ENSG00000143412	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs2305814	0.52	0.52	0.534	0.550919	0.4453	0.5883	0.6095	0.5182	0.6237	0.44	0.61	0.57	0.51	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.165688	NA	NA	NA	NA	NA	0.413	NA	3.5547
1297	1	227170298	227170298	A	G	intronic	ADCK3	NA	NA	NA	intronic	ENSG00000163050	NA	NA	NA	NA	NA	1q42.13	NA	NA	NA	NA	rs2297412	0.35	0.35	0.391	0.35603	0.4453	0.2073	0.353	0.4992	0.226	0.41	0.18	0.33	0.45	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.615139	NA	NA	NA	NA	NA	0.5	NA	3.5547
1297	5	118965609	118965609	C	A	intronic	FAM170A	NA	NA	NA	intronic	ENSG00000164334	NA	NA	NA	NA	NA	5q23.1	NA	NA	NA	NA	rs2431372	0.43	0.43	0.386	0.4375	0.4453	0.497	0.3818	0.329	0.5542	0.42	0.53	0.4	0.33	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.453704	NA	NA	NA	NA	NA	0.457	NA	3.5547
1297	10	5174913	5174913	C	T	intergenic	AKR1C3,AKR1CL1	dist=25035;dist=21742	NA	NA	ncRNA_exonic	ENSG00000225418	NA	NA	NA	NA	NA	10p15.1	NA	NA	NA	NA	rs11252991	0.29	0.29	0.282	0.271765	0.4453	0.001	0.2622	0.4244	0.1728	0.43	0.0017	0.3	0.42	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.567299	NA	NA	NA	NA	NA	0.341	NA	3.5547
1297	10	50952851	50952851	C	T	intronic	OGDHL	NA	NA	NA	intronic	ENSG00000197444	NA	NA	NA	NA	NA	10q11.23	NA	NA	NA	NA	rs1268723	0.5	0.5	0.441	0.436701	0.4453	0.9107	0.4669	0.0666	0.4182	0.45	0.9	0.51	0.09	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.23648	NA	NA	NA	NA	NA	0.297	NA	3.5547
1297	11	18017517	18017517	T	C	intronic	SERGEF	NA	NA	NA	intronic	ENSG00000129158	NA	NA	NA	NA	NA	11p15.1	NA	NA	NA	NA	rs211131	0.48	0.48	0.487	0.541134	0.4453	0.4048	0.4452	0.7458	0.5716	0.43	0.38	0.45	0.72	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.424211	1.424211	NA	NA	NA	NA	0.514	NA	3.5547
1297	12	110002777	110002777	C	T	intronic	MMAB	NA	NA	NA	intronic	ENSG00000139428	NA	NA	NA	NA	NA	12q24.11	NA	NA	NA	NA	rs10850379	0.35	0.35	0.35	0.341054	0.4453	0.2004	0.3357	0.3858	0.3221	0.45	0.19	0.38	0.37	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.076618	NA	NA	NA	NA	NA	0.413	NA	3.5547
1297	17	25601154	25601154	A	G	intergenic	NONE,MIR4522	dist=NONE;dist=19782	NA	NA	ncRNA_exonic	ENSG00000239223	NA	NA	NA	NA	NA	17q11.1	NA	NA	NA	NA	rs58571455	NA	NA	NA	0.484625	0.4453	0.2688	0.3991	0.6286	0.6135	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.988433	NA	NA	NA	NA	NA	NA	NA	3.5547
1297	18	57136902	57136902	C	A	intronic	CCBE1	NA	NA	NA	intronic	ENSG00000183287	NA	NA	NA	NA	NA	18q21.32	NA	NA	NA	NA	rs663452	0.39	0.39	0.41	0.413738	0.4453	0.4266	0.3213	0.3714	0.4908	0.44	0.42	0.32	0.35	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.8525	NA	NA	NA	NA	NA	0.428	NA	3.5547
1297	18	57136995	57136995	G	A	intronic	CCBE1	NA	NA	NA	intronic	ENSG00000183287	NA	NA	NA	NA	NA	18q21.32	NA	NA	NA	NA	rs643602	0.39	0.39	0.39	0.413339	0.4453	0.4266	0.3213	0.3699	0.4908	0.44	0.42	0.32	0.35	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.092841	NA	NA	NA	NA	NA	0.428	NA	3.5547
1297	20	3175694	3175694	G	A	intronic	DDRGK1	NA	NA	NA	intronic	ENSG00000198171	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs2295550	0.42	0.42	0.439	0.439097	0.4453	0.3998	0.3732	0.4644	0.4857	0.45	0.37	0.4	0.47	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.910839	NA	NA	NA	NA	NA	0.507	NA	3.5547
1297	21	34823252	34823252	C	T	intronic	TMEM50B	NA	NA	NA	intronic	ENSG00000142188,ENSG00000159128	NA	NA	NA	NA	NA	21q22.11	NA	NA	NA	NA	rs2834220	0.66	0.66	0.661	0.68151	0.4453	0.8105	0.5937	0.848	0.6288	0.46	0.83	0.57	0.83	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.928204	2.928204	NA	NA	NA	NA	0.696	NA	3.5547
1297	17	73125173	73125173	A	G	UTR3	ARMC7	NM_024585:c.*40A>G	NA	NA	UTR3	ENSG00000125449	ENST00000581078:c.*261A>G,ENST00000245543:c.*40A>G	NA	NA	NA	NA	17q25.1	NA	Name=Pol2,ZNF263	NA	NA	rs2291027	0.4	0.4	0.353	0.382588	0.6153	0.2817	0.4553	0.0696	0.6186	0.64	0.29	0.49	0.1	0.5461	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.610889	NA	NA	0.617598	0.156293	NA	0.507	NA	3.5543354
1297	7	66474559	66474559	G	C	intronic	TYW1	NA	NA	NA	intronic	ENSG00000198874	NA	NA	NA	NA	NA	7q11.21	NA	NA	NA	NA	rs4717339	0.12	0.12	0.109	0.110823	0.166	0.0665	0.1787	0.0567	0.1247	0.16	0.08	0.21	0.05	0.1316	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.938476	NA	NA	0.14814	0.074671	NA	0.109	NA	3.55426
1297	4	178262805	178262805	T	C	intronic	NEIL3	NA	NA	NA	intronic	ENSG00000109674	NA	NA	NA	NA	NA	4q34.3	NA	NA	NA	NA	rs35686329	0.11	0.11	0.109	0.0966454	0.16	0.1012	0.0576	0.0242	0.1524	0.16	0.11	0.1	0.03	0.1323	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.312055	NA	NA	0.153488	0.046527	NA	0.123	NA	3.554212
1297	19	38848861	38848861	C	G	intronic	CATSPERG	NA	NA	NA	intronic	ENSG00000099338	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs8106895	0.27	0.27	0.213	0.280551	0.2475	0.3998	0.3761	0.0847	0.3885	0.24	0.44	0.35	0.09	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.765534	NA	NA	0.198303	0.12211	NA	0.159	NA	3.554197
1297	3	183861750	183861750	A	C	intronic	EIF2B5	NA	NA	NA	intronic	ENSG00000145191	NA	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs843357	0.45	0.45	0.412	0.473842	0.4463	0.5357	0.4524	0.3585	0.6094	0.43	0.53	0.44	0.37	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.158043	NA	NA	NA	NA	NA	0.377	NA	3.5537
1297	4	34967868	34967868	G	T	intergenic	NONE,ARAP2	dist=NONE;dist=1099752	NA	NA	ncRNA_exonic	ENSG00000238694	NA	NA	NA	NA	NA	4p15.1	NA	NA	NA	NA	rs6825756	0.48	0.48	0.457	0.485623	0.4463	0.6786	0.5331	0.2958	0.5501	0.45	0.68	0.46	0.3	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.468692	NA	NA	NA	NA	NA	0.406	NA	3.5537
1297	9	117666678	117666678	G	A	intronic	TNFSF8	NA	NA	NA	intronic	ENSG00000106952	NA	NA	NA	NA	NA	9q32	NA	NA	NA	NA	rs3181367	0.56	0.56	0.568	0.571486	0.4463	0.3859	0.7075	0.8238	0.454	0.44	0.44	0.67	0.8	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.113527	NA	NA	NA	NA	NA	0.507	NA	3.5537
1297	9	128124798	128124798	A	T	intronic	GAPVD1	NA	NA	NA	intronic	ENSG00000165219	NA	NA	NA	NA	NA	9q33.3	NA	NA	NA	NA	rs13291306	0.35	0.35	0.37	0.346446	0.4463	0.2192	0.3213	0.3691	0.362	0.46	0.19	0.32	0.4	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.123107	NA	NA	NA	NA	NA	0.348	NA	3.5537
1297	13	28958955	28958955	C	A	intronic	FLT1	NA	NA	NA	intronic	ENSG00000102755	NA	NA	NA	NA	NA	13q12.3	NA	NA	NA	NA	rs3751395	0.57	0.57	0.544	0.597644	0.4463	0.6081	0.6758	0.6551	0.6094	0.42	0.65	0.68	0.66	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.604729	NA	NA	NA	NA	NA	0.717	NA	3.5537
1297	11	118416073	118416073	A	C	intronic	IFT46,TMEM25	NA	NA	NA	intronic	ENSG00000118096,ENSG00000149582	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs3825055	0.23	0.23	0.204	0.258387	0.1342	0.5556	0.0749	0.1611	0.3415	0.13	0.53	0.09	0.14	0.1805	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.268178	NA	NA	0.131665	0.1575	NA	0.188	NA	3.553635
1297	16	1306268	1306268	C	T	upstream	TPSD1	NA	NA	NA	UTR5	ENSG00000095917	ENST00000211076:c.-14C>T	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs1969652	0.26	0.26	0.19	0.258986	0.2207	0.1468	0.3386	0.3964	0.1718	0.2	0.15	0.32	0.41	0.2258	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.336089	NA	NA	NA	NA	NA	NA	NA	3.5535
1297	19	38778617	38778617	A	G	intronic	SPINT2	NA	NA	NA	intronic	ENSG00000167642	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs8104823	0.13	0.13	0.101	0.145367	0.163	0.0546	0.2305	0.084	0.2434	0.16	0.08	0.24	0.09	0.1525	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.054052	NA	NA	0.131047	0.098956	NA	0.13	NA	3.553453
1297	12	96387829	96387829	A	G	intronic	HAL	NA	NA	NA	intronic	ENSG00000084110	NA	NA	NA	NA	NA	12q23.1	NA	NA	NA	NA	rs17677007	0.08	0.08	0.079	0.0726837	0.1461	0.0476	0.111	0.0091	0.0818	0.14	0.05	0.11	0.02	0.126	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.042694	NA	NA	0.175116	0.038357	NA	0.022	NA	3.552784
1297	2	114426115	114426115	T	C	intergenic	RABL2A,SLC35F5	dist=25140;dist=45818	NA	NA	ncRNA_exonic	ENSG00000175509	NA	NA	NA	NA	NA	2q14.1	NA	NA	NA	NA	rs2285396	NA	NA	0.44	0.517173	0.4473	0.4147	0.4856	0.7254	0.4356	NA	NA	NA	NA	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.095691	NA	NA	NA	NA	NA	0.543	NA	3.5527
1297	2	228513217	228513217	C	T	intergenic	C2orf83,SLC19A3	dist=15181;dist=36709	NA	NA	ncRNA_exonic	ENSG00000250599	NA	NA	NA	NA	NA	2q36.3	NA	NA	NA	NA	rs6436722	0.55	0.55	0.525	0.588458	0.4473	0.628	0.5331	0.6793	0.6094	0.44	0.61	0.52	0.67	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5617	NA	NA	NA	NA	NA	0.529	NA	3.5527
1297	6	152774917	152774917	A	G	intronic	SYNE1	NA	NA	NA	intronic	ENSG00000131018	NA	NA	NA	NA	NA	6q25.2	NA	NA	NA	NA	rs214973	0.59	0.59	0.599	0.607428	0.4473	0.749	0.3732	0.8094	0.5194	0.44	0.74	0.4	0.77	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.858726	NA	NA	NA	NA	NA	0.572	NA	3.5527
1297	10	134981942	134981942	C	T	intronic	KNDC1	NA	NA	NA	intronic	ENSG00000171798	NA	NA	NA	NA	NA	10q26.3	NA	NA	NA	NA	rs3008303	0.52	0.52	0.53	0.520966	0.4473	0.5397	0.6513	0.5098	0.5	0.45	0.57	0.6	0.52	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.330269	NA	NA	NA	NA	NA	0.623	NA	3.5527
1297	15	31244083	31244083	T	G	intronic	MTMR10	NA	NA	NA	intronic	ENSG00000166912	NA	NA	NA	NA	NA	15q13.3	NA	NA	NA	NA	rs2955790	0.52	0.52	0.5	0.499002	0.4473	0.8333	0.4726	0.2602	0.5491	0.46	0.87	0.46	0.25	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.032456	NA	NA	NA	NA	NA	0.594	NA	3.5527
1297	20	32354990	32354990	G	A	intronic	ZNF341	NA	NA	NA	intronic	ENSG00000131061	NA	NA	NA	NA	NA	20q11.22	NA	NA	NA	NA	rs3813920	0.53	0.53	0.541	0.511382	0.4473	0.7421	0.4971	0.3835	0.5225	0.46	0.76	0.47	0.41	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.494588	NA	NA	NA	NA	NA	0.536	NA	3.5527
1297	7	21640618	21640618	C	G	intronic	DNAH11	NA	NA	NA	intronic	ENSG00000105877	NA	NA	NA	NA	NA	7p15.3	NA	NA	NA	NA	rs17745898	0.09	0.09	0.075	0.0796725	0.17	0.0337	0.1023	0.0045	0.1196	0.16	0.05	0.12	0.002	0.1182	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.197888	NA	NA	0.159413	0.026532	NA	0.203	NA	3.552387
1297	4	1742400	1742400	T	C	intronic	TACC3	NA	NA	NA	ncRNA_exonic	ENSG00000218422	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs4865463	0.72	0.72	0.722	0.698083	0.7813	0.8532	0.6945	0.4644	0.771	0.8	0.87	0.69	0.44	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.293063	NA	NA	NA	NA	NA	0.754	NA	3.5520333
1297	4	6602255	6602255	A	G	intronic	MAN2B2	NA	NA	NA	intronic	ENSG00000013288	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs2301789	0.52	0.52	0.504	0.519369	0.4483	0.6161	0.4986	0.5386	0.4816	0.45	0.62	0.49	0.52	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.252088	1.252088	NA	NA	NA	NA	0.442	NA	3.5517
1297	5	137844274	137844274	A	G	intronic	ETF1	NA	NA	NA	intronic	ENSG00000120705	NA	NA	NA	NA	NA	5q31.2	NA	NA	NA	NA	rs2242599	0.52	0.52	0.535	0.526957	0.4483	0.7788	0.3833	0.4334	0.5767	0.45	0.8	0.39	0.41	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.370008	NA	NA	NA	NA	NA	0.507	NA	3.5517
1297	5	168244543	168244543	A	G	intronic	SLIT3	NA	NA	NA	intronic	ENSG00000184347	NA	NA	NA	NA	NA	5q34	NA	NA	NA	NA	rs905799	0.5	0.5	0.495	0.519169	0.4483	0.6111	0.4121	0.5318	0.5562	0.45	0.59	0.43	0.53	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.523531	NA	NA	NA	NA	NA	0.457	NA	3.5517
1297	9	123857085	123857085	C	T	intronic	CNTRL	NA	NA	NA	intronic	ENSG00000119397	NA	NA	NA	NA	NA	9q33.2	NA	NA	NA	NA	rs10760146	0.42	0.42	0.384	0.430511	0.4483	0.5694	0.4957	0.1233	0.638	0.45	0.58	0.49	0.13	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.218496	NA	NA	NA	NA	NA	0.384	NA	3.5517
1297	16	84797637	84797637	T	A	intronic	USP10	NA	NA	NA	intronic	ENSG00000103194	NA	NA	NA	NA	NA	16q24.1	NA	NA	NA	NA	rs3213810	0.36	0.36	0.379	0.299521	0.4483	0.0675	0.2767	0.5197	0.1043	0.47	0.07	0.32	0.55	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.492244	NA	NA	NA	NA	NA	0.551	NA	3.5517
1297	19	45004042	45004042	T	C	intronic	ZNF180	NA	NA	NA	intronic	ENSG00000167384	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs12459496	0.34	0.34	0.301	0.349042	0.4483	0.3929	0.3948	0.056	0.5654	0.44	0.37	0.45	0.07	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.677691	NA	NA	NA	NA	NA	0.254	NA	3.5517
1297	12	52700100	52700100	C	A	intronic	KRT86	NA	NA	NA	intronic	ENSG00000170442	NA	NA	NA	NA	NA	12q13.13	NA	Name=Rad21,CTCF	NA	NA	rs11612715	0.45	0.45	0.488	0.477835	0.496	0.2321	0.3689	0.6793	0.5174	0.48	0.23	0.38	0.71	0.4681	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.995951	NA	NA	0.484419	0.66069	ID=COSN164255;OCCURENCE=1(breast)	0.536	NA	3.551481
1297	6	30574194	30574194	C	T	intronic	PPP1R10	NA	NA	NA	intronic	ENSG00000204569	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs12174151	0.16	0.16	0.123	0.134784	0.1471	0.2927	0.2118	0.0106	0.0726	0.15	0.25	0.21	0.02	0.1544	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.741558	2.741558	NA	0.147244	0.034952	NA	0.116	NA	3.551256
1297	6	24467366	24467366	C	T	intronic	GPLD1	NA	NA	NA	intronic	ENSG00000112293	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs6928435	0.23	0.23	0.252	0.248203	0.164	0.1071	0.147	0.5151	0.1912	0.16	0.11	0.17	0.54	0.1679	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.114071	NA	NA	0.11686	0.448706	ID=COSN167706;OCCURENCE=1(large_intestine)	0.246	NA	3.55124
1297	2	225365056	225365056	A	G	intronic	CUL3	NA	NA	NA	intronic	ENSG00000036257	NA	NA	NA	NA	NA	2q36.2	NA	NA	NA	NA	rs3768889	0.2	0.2	0.182	0.232827	0.1312	0.2401	0.2262	0.2542	0.3057	0.13	0.24	0.22	0.23	0.1841	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.606892	2.606892	NA	0.133488	0.255334	NA	0.188	NA	3.551212
1297	6	24475300	24475300	A	T	intronic	GPLD1	NA	NA	NA	intronic	ENSG00000112293	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs6901703	0.23	0.23	0.241	0.248003	0.165	0.1062	0.147	0.5151	0.1902	0.16	0.1	0.17	0.54	0.1674	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.463082	NA	NA	0.11686	0.44916	NA	0.246	NA	3.55074
1297	3	64619048	64619048	C	T	intronic	ADAMTS9	NA	NA	NA	intronic	ENSG00000163638	NA	NA	NA	NA	NA	3p14.1	NA	NA	NA	NA	rs11717158	0.54	0.54	0.545	0.58107	0.4493	0.5139	0.5346	0.7852	0.5429	0.44	0.49	0.53	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.747357	NA	NA	NA	NA	NA	0.652	NA	3.5507
1297	10	21536993	21536993	A	G	intergenic	NEBL-AS1,C10orf114	dist=73141;dist=246428	NA	NA	ncRNA_exonic	ENSG00000232853	NA	NA	NA	NA	NA	10p12.31	NA	NA	NA	NA	rs7900467	0.49	0.49	0.497	0.53754	0.4493	0.1558	0.5144	0.8858	0.5675	0.46	0.17	0.54	0.87	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.902578	NA	NA	NA	NA	NA	0.572	NA	3.5507
1297	12	118511412	118511412	T	C	intronic	VSIG10	NA	NA	NA	intronic	ENSG00000176834	NA	NA	NA	NA	NA	12q24.23	NA	NA	NA	NA	rs55833872	0.53	0.53	0.522	0.52496	0.4493	0.7272	0.4914	0.444	0.5276	0.45	0.75	0.47	0.43	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.262197	NA	NA	NA	NA	NA	0.362	NA	3.5507
1297	16	84459512	84459512	G	C	intronic	ATP2C2	NA	NA	NA	intronic	ENSG00000064270	NA	NA	NA	NA	NA	16q24.1	NA	NA	NA	NA	rs1887	0.4	0.4	0.376	0.408546	0.4493	0.2956	0.4366	0.4539	0.4018	0.46	0.27	0.46	0.44	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.215297	NA	NA	NA	NA	NA	0.435	NA	3.5507
1297	17	6553583	6553583	G	A	intronic	MED31	NA	NA	NA	intronic	ENSG00000108590	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs2301874	0.34	0.34	0.321	0.309505	0.4493	0.2897	0.3156	0.1747	0.364	0.47	0.32	0.32	0.18	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.98793	NA	NA	NA	NA	NA	0.188	NA	3.5507
1297	19	36581263	36581263	G	C	intronic	WDR62	NA	NA	NA	intronic	ENSG00000075702	NA	NA	NA	NA	NA	19q13.12	NA	NA	NA	NA	rs3746271	0.47	0.47	0.427	0.412939	0.4493	0.5774	0.5562	0.2731	0.2935	0.46	0.6	0.51	0.31	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.321925	NA	NA	NA	NA	NA	0.254	NA	3.5507
1297	20	58587484	58587484	A	G	intronic	CDH26	NA	NA	NA	intronic	ENSG00000124215	NA	NA	NA	NA	NA	20q13.33	NA	NA	NA	NA	rs35858953	0.27	0.27	0.227	0.259585	0.4493	0.2063	0.4049	0.0212	0.3384	0.44	0.17	0.4	0.03	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.567607	NA	NA	NA	NA	NA	0.239	NA	3.5507
1297	19	54802440	54802440	T	G	intronic	LILRA3	NA	NA	NA	intronic	ENSG00000170866	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs7508470	0.4	0.4	0.348	0.430511	0.1123	0.4256	0.4352	0.8033	0.2556	0.12	0.51	0.34	0.77	0.2346	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.710671	NA	NA	0.102554	0.609158	NA	0.341	NA	3.550546
1297	19	58797344	58797344	A	C	intronic	ZNF8	NA	NA	NA	UTR3	ENSG00000269545	ENST00000600029:c.*319A>C	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs400733	0.56	0.56	0.564	0.561102	0.6163	0.5188	0.5533	0.5439	0.5767	0.61	0.52	0.59	0.52	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.669778	NA	NA	NA	NA	NA	0.63	NA	3.5503667
1297	15	89151262	89151262	T	A	upstream	MIR1179	NA	NA	NA	upstream	ENSG00000221630	NA	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs2350271	0.17	0.17	0.11	0.160942	0.1163	0.4008	0.17	0.0053	0.1636	0.13	0.39	0.15	0.01	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.31117	NA	NA	NA	NA	ID=COSN165033;OCCURENCE=1(breast)	0.13	NA	3.5503666
1297	5	161309752	161309752	T	G	intronic	GABRA1	NA	NA	NA	intronic	ENSG00000022355	NA	NA	NA	NA	NA	5q34	NA	NA	NA	NA	rs11135172	0.21	0.21	0.179	NA	NA	NA	NA	NA	NA	0.27	0.26	0.24	0.03	0.2159	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.108116	NA	NA	0.233837	0.071072	NA	0.159	NA	3.550263
1297	2	31621598	31621598	T	C	intronic	XDH	NA	NA	NA	intronic	ENSG00000158125	NA	NA	NA	NA	NA	2p23.1	NA	NA	NA	NA	rs10175754	0.11	0.11	0.119	0.124002	0.17	0.002	0.1037	0.1793	0.1421	0.15	0.0035	0.12	0.18	0.133	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.597072	NA	NA	0.146744	0.179528	NA	0.145	NA	3.550256
1297	14	81558965	81558965	A	G	intronic	TSHR	NA	NA	NA	intronic	ENSG00000165409	NA	NA	NA	NA	NA	14q31.1	NA	NA	NA	NA	rs2241119	0.29	0.29	0.309	0.29972	0.1262	0.3046	0.1427	0.5953	0.1851	0.12	0.32	0.14	0.62	0.1887	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.450351	NA	NA	0.134884	0.530186	NA	0.268	NA	3.550216
1297	3	100277514	100277514	G	A	intronic	TMEM45A	NA	NA	NA	intronic	ENSG00000181458	NA	NA	NA	NA	NA	3q12.2	NA	NA	NA	NA	rs7645700	0.5	0.5	0.522	0.478235	0.4503	0.3175	0.4337	0.8094	0.2566	0.46	0.33	0.45	0.81	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.613745	NA	NA	NA	NA	NA	0.645	NA	3.5497
1297	7	75442855	75442855	A	G	intronic	CCL24	NA	NA	NA	intronic	ENSG00000106178	NA	NA	NA	NA	NA	7q11.23	NA	NA	NA	NA	rs2302004	0.52	0.52	0.501	0.49401	0.4503	0.6964	0.5447	0.3888	0.4366	0.47	0.69	0.53	0.41	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.157274	NA	NA	NA	NA	NA	0.536	NA	3.5497
1297	12	57255195	57255195	T	C	intergenic	HSD17B6,SDR9C7	dist=73621;dist=61743	NA	NA	ncRNA_exonic	ENSG00000212383	NA	NA	NA	NA	NA	12q13.3	NA	NA	NA	NA	rs10783805	0.5	0.5	0.491	0.507588	0.4503	0.6746	0.4179	0.3457	0.6769	0.44	0.72	0.43	0.39	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.999253	NA	NA	NA	NA	NA	0.5	NA	3.5497
1297	12	120221636	120221636	C	T	intronic	CIT	NA	NA	NA	intronic	ENSG00000122966	NA	NA	NA	NA	NA	12q24.23	NA	NA	NA	NA	rs2240310	0.4	0.4	0.348	0.39357	0.4503	0.4276	0.5648	0.1989	0.4417	0.45	0.38	0.57	0.19	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.532898	2.532898	NA	NA	NA	NA	0.348	NA	3.5497
1297	12	122492978	122492978	T	C	intronic	BCL7A	NA	NA	NA	intronic	ENSG00000110987	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs2280574	0.4	0.4	0.392	0.402157	0.4503	0.4732	0.3458	0.3094	0.4448	0.45	0.44	0.38	0.29	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011926	NA	NA	NA	NA	NA	0.449	NA	3.5497
1297	13	28592546	28592546	T	C	intronic	FLT3	NA	NA	NA	intronic	ENSG00000122025	NA	NA	NA	NA	NA	13q12.2	NA	NA	NA	NA	rs17086226	0.21	0.21	0.211	0.249002	0.2107	0.251	0.2176	0.1467	0.4468	0.2	0.29	0.22	0.13	0.2396	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.008251	2.008251	NA	NA	NA	NA	0.268	NA	3.5497
1297	17	7848058	7848058	A	C	intronic	CNTROB	NA	NA	NA	intronic	ENSG00000170037	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs4791993	0.56	0.56	0.52	0.604832	0.4503	0.8016	0.6614	0.447	0.7342	0.46	0.74	0.61	0.48	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.166033	NA	NA	NA	NA	NA	0.522	NA	3.5497
1297	19	44977240	44977240	A	G	intergenic	ZNF229,ZNF180	dist=24575;dist=2619	NA	NA	ncRNA_exonic	ENSG00000176761	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs1897823	0.46	0.46	0.47	0.434505	0.4503	0.4335	0.2939	0.6225	0.2648	0.45	0.48	0.32	0.56	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.775476	NA	NA	NA	NA	NA	0.478	NA	3.5497
1297	22	38539041	38539041	T	C	intronic	PLA2G6	NA	NA	NA	intronic	ENSG00000184381	NA	NA	NA	NA	NA	22q13.1	NA	NA	NA	NA	rs4375	0.44	0.44	0.44	0.497604	0.4503	0.2887	0.4712	0.6437	0.5828	0.41	0.28	0.5	0.62	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.176567	3.176567	NA	NA	NA	NA	0.565	NA	3.5497
1297	2	225376034	225376034	G	A	intronic	CUL3	NA	NA	NA	intronic	ENSG00000036257	NA	NA	NA	NA	NA	2q36.2	NA	NA	NA	NA	rs11686067	0.2	0.2	0.188	0.232827	0.1312	0.2401	0.2262	0.2542	0.3057	0.14	0.25	0.23	0.23	0.1855	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.317291	NA	NA	0.133752	0.253975	NA	0.188	NA	3.549548
1297	9	27229141	27229141	T	C	intronic	TEK	NA	NA	NA	intronic	ENSG00000120156	NA	NA	NA	NA	NA	9p21.2	NA	NA	NA	NA	rs2273715	0.19	0.19	0.199	0.223043	0.1282	0.1855	0.1614	0.3752	0.1973	0.14	0.17	0.14	0.32	0.1724	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.039587	NA	NA	0.150233	0.330005	NA	0.21	NA	3.549167
1297	14	106110137	106110137	C	T	intergenic	TMEM121,ELK2AP	dist=113598;dist=25777	NA	NA	exonic	ENSG00000211893	NA	nonsynonymous SNV	ENSG00000211893:ENST00000390545:exon3:c.G481A:p.V161M	NA	NA	14q32.33	NA	NA	NA	NA	rs8009156	0.29	0.29	0.239	0.298123	0.4384	0.5337	0.2622	0.0174	0.316	0.42	0.35	0.28	0.01	0.3926	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.812272	NA	NA	0.453205	0.086927	NA	0.174	NA	3.5491284
1297	7	100552338	100552338	C	T	intergenic	ACHE,MUC12	dist=58797;dist=60566	NA	NA	exonic	ENSG00000169894	NA	synonymous SNV	ENSG00000169894:ENST00000319509:exon1:c.C1089T:p.T363T	NA	NA	7q22.1	NA	NA	NA	NA	rs73398798	NA	NA	NA	0.000199681	NA	NA	NA	0.0008	NA	NA	NA	NA	NA	0.496	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.927799	NA	NA	0.455048	0.447489	NA	0.101	NA	3.548952
1297	22	45758758	45758758	T	C	intronic	SMC1B	NA	NA	NA	intronic	ENSG00000077935	NA	NA	NA	NA	NA	22q13.31	Score=900;Name=V$PAX4_02	NA	NA	NA	rs719925	0.36	0.36	0.339	0.299521	0.495	0.2996	0.4697	0.0817	0.272	0.51	0.34	0.43	0.1	0.4349	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.193058	NA	NA	0.521368	0.15397	NA	0.203	NA	3.548732
1297	3	53890787	53890787	G	A	intronic	IL17RB	NA	NA	NA	intronic	ENSG00000056736	NA	NA	NA	NA	NA	3p21.1	NA	NA	NA	NA	rs3821867	0.64	0.64	0.652	0.66853	0.4513	0.9444	0.6095	0.6324	0.6984	0.43	0.95	0.6	0.65	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.582341	NA	NA	NA	NA	NA	0.623	NA	3.5487
1297	3	64617042	64617042	G	C	intronic	ADAMTS9	NA	NA	NA	intronic	ENSG00000163638	NA	NA	NA	NA	NA	3p14.1	NA	NA	NA	NA	rs6768487	0.56	0.56	0.557	0.604233	0.4513	0.5556	0.5389	0.8011	0.592	0.44	0.54	0.54	0.77	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.168294	NA	NA	NA	NA	NA	0.652	NA	3.5487
1297	5	175992519	175992519	T	A	intronic	CDHR2	NA	NA	NA	intronic	ENSG00000074276	NA	NA	NA	NA	NA	5q35.2	NA	NA	NA	NA	rs4523018	0.25	0.25	0.207	0.219649	0.4513	0.0248	0.4135	0.0976	0.2096	0.45	0.02	0.41	0.11	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.356913	NA	NA	NA	NA	NA	0.268	NA	3.5487
1297	8	27288033	27288033	T	C	intronic	PTK2B	NA	NA	NA	intronic	ENSG00000120899	NA	NA	NA	NA	NA	8p21.2	NA	NA	NA	NA	rs7827965	0.4	0.4	0.407	0.444489	0.4513	0.2698	0.438	0.4985	0.5491	0.47	0.23	0.42	0.48	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.120217	NA	NA	NA	NA	NA	0.529	NA	3.5487
1297	17	61564522	61564522	T	C	intronic	ACE	NA	NA	NA	intronic	ENSG00000159640,ENSG00000264813	NA	NA	NA	NA	NA	17q23.3	NA	NA	NA	NA	rs4333	0.53	0.53	0.473	0.542931	0.4513	0.6756	0.5951	0.4213	0.6278	0.46	0.69	0.59	0.44	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.618251	NA	NA	NA	NA	NA	0.529	NA	3.5487
1297	19	10886206	10886206	G	T	intronic	DNM2	NA	NA	NA	intronic	ENSG00000079805	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs4804528	0.3	0.3	0.277	0.257788	0.4513	0.2073	0.2334	0.1225	0.3108	0.47	0.22	0.27	0.14	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.184403	NA	NA	NA	NA	NA	0.246	NA	3.5487
1297	22	22758721	22758721	C	T	intergenic	LOC96610,ZNF280B	dist=81397;dist=80051	NA	NA	ncRNA_intronic	ENSG00000253818	NA	NA	NA	NA	NA	22q11.22	NA	NA	NA	NA	rs426552	0.45	0.45	0.414	0.478035	0.4513	0.3145	0.5922	0.5477	0.499	0.45	0.31	0.54	0.53	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.546802	NA	NA	NA	NA	NA	0.457	NA	3.5487
1297	19	7626071	7626071	T	C	intronic	PNPLA6	NA	NA	NA	intronic	ENSG00000032444	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs62111319	0.12	0.12	0.123	0.1248	0.1471	NA	0.1095	0.2466	0.0767	0.14	NA	0.1	0.24	0.1566	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.474831	NA	NA	0.147627	0.226715	NA	0.261	NA	3.548673
1297	16	72198642	72198642	G	A	intronic	PMFBP1	NA	NA	NA	intronic	ENSG00000118557	NA	NA	NA	NA	NA	16q22.2	NA	NA	NA	NA	rs3852785	0.08	0.08	0.073	0.0856629	0.1531	0.0218	0.0648	0.0113	0.1973	0.16	0.02	0.08	0.02	0.1413	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.290093	NA	NA	0.157442	0.033894	NA	0.145	NA	3.548158
1297	14	104578817	104578817	G	A	intronic	ASPG	NA	NA	NA	intronic	ENSG00000166183	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs11850264	0.08	0.08	0.07	0.067492	0.159	NA	0.0951	0.0272	0.0777	0.16	NA	0.1	0.03	0.129	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.784128	NA	NA	0.163975	0.050823	NA	0.072	NA	3.548025
1297	15	89401615	89401615	T	G	exonic	ACAN	NA	synonymous SNV	ACAN:NM_001135:exon12:c.T5799G:p.T1933T,ACAN:NM_013227:exon12:c.T5799G:p.T1933T	exonic	ENSG00000157766	NA	synonymous SNV	ENSG00000157766:ENST00000561243:exon11:c.T5799G:p.T1933T,ENSG00000157766:ENST00000352105:exon12:c.T5799G:p.T1933T,ENSG00000157766:ENST00000439576:exon12:c.T5799G:p.T1933T,ENSG00000157766:ENST00000559004:exon12:c.T5799G:p.T1933T	NA	NA	15q26.1	NA	NA	NA	NA	rs3825994	0.58	0.58	0.545	0.532548	0.7326	0.5427	0.5879	0.3593	0.5112	0.75	0.51	0.62	0.35	0.6399	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.101855	NA	NA	0.746184	0.437565	NA	0.572	NA	3.5479826
1297	7	142832255	142832255	C	T	intronic	PIP	NA	NA	NA	intronic	ENSG00000159763	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs10234174	0.21	0.21	0.227	0.218251	0.1412	0.0357	0.1441	0.5499	0.09	0.13	0.04	0.16	0.55	0.1734	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.025839	NA	NA	0.137474	0.482524	NA	0.261	NA	3.547926
1297	2	225367669	225367669	C	T	intronic	CUL3	NA	NA	NA	intronic	ENSG00000036257	NA	NA	NA	NA	NA	2q36.2	NA	NA	NA	NA	rs3754629	0.2	0.2	0.195	0.232628	0.1322	0.2401	0.2262	0.2526	0.3057	0.13	0.24	0.22	0.23	0.1857	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.479744	NA	NA	0.134302	0.255107	NA	0.188	NA	3.547798
1297	9	19326053	19326053	G	T	intronic	DENND4C	NA	NA	NA	intronic	ENSG00000137145	NA	NA	NA	NA	NA	9p22.1	NA	NA	NA	NA	rs2256093	0.18	0.18	0.199	0.233227	0.1471	0.0169	0.1671	0.5272	0.1943	0.11	0.02	0.15	0.51	0.1693	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.53816	NA	NA	0.135814	0.439174	NA	0.232	NA	3.547786
1297	16	4253117	4253117	C	T	intronic	SRL	NA	NA	NA	intronic	ENSG00000185739	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs13339613	0.12	0.12	0.095	0.0986422	0.1491	0.0516	0.2378	0.034	0.0838	0.14	0.05	0.24	0.07	0.1438	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.158473	NA	NA	0.159356	0.060916	NA	0.159	NA	3.547744
1297	5	31407139	31407139	G	C	intronic	DROSHA	NA	NA	NA	intronic	ENSG00000113360	NA	NA	NA	NA	NA	5p13.3	NA	NA	NA	NA	rs507816	0.59	0.59	0.614	0.598642	0.4523	0.6776	0.5202	0.7292	0.547	0.45	0.72	0.52	0.7	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.238394	NA	NA	NA	NA	NA	0.5	NA	3.5477
1297	6	131490472	131490472	T	C	intronic	AKAP7	NA	NA	NA	intronic	ENSG00000118507	NA	NA	NA	NA	NA	6q23.2	NA	NA	NA	NA	rs1408027	0.53	0.53	0.5	0.53754	0.4523	0.7609	0.4957	0.447	0.547	0.44	0.74	0.46	0.46	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.565984	NA	NA	NA	NA	NA	0.514	NA	3.5477
1297	10	97987378	97987378	G	A	intronic	BLNK	NA	NA	NA	intronic	ENSG00000095585	NA	NA	NA	NA	NA	10q24.1	NA	NA	NA	NA	rs34233512	0.26	0.26	0.22	0.219249	0.4523	0.0377	0.415	0.0893	0.2035	0.44	0.05	0.44	0.1	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.965461	NA	NA	NA	NA	NA	0.188	NA	3.5477
1297	11	103780610	103780610	C	T	intronic	PDGFD	NA	NA	NA	intronic	ENSG00000170962	NA	NA	NA	NA	NA	11q22.3	NA	NA	NA	NA	rs4754997	0.47	0.47	0.471	0.461661	0.4523	0.4603	0.3487	0.5106	0.4867	0.44	0.5	0.39	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.882637	NA	NA	NA	NA	NA	0.384	NA	3.5477
1297	17	31082747	31082747	T	C	intronic	MYO1D	NA	NA	NA	intronic	ENSG00000176658	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs4548927	0.57	0.57	0.582	0.581669	0.4523	0.7242	0.4942	0.6808	0.4959	0.46	0.72	0.49	0.63	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.406836	NA	NA	NA	NA	NA	0.572	NA	3.5477
1297	18	48328003	48328003	T	C	intronic	MRO	NA	NA	NA	intronic	ENSG00000134042	NA	NA	NA	NA	NA	18q21.2	NA	NA	NA	NA	rs2255059	0.42	0.42	0.426	0.417732	0.4523	0.4177	0.4135	0.4198	0.3824	0.45	0.42	0.41	0.41	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.296011	NA	NA	NA	NA	NA	0.543	NA	3.5477
1297	1	161126975	161126975	C	G	intronic	UFC1	NA	NA	NA	ncRNA_intronic	ENSG00000224985	NA	NA	NA	NA	NA	1q23.3	NA	NA	NA	NA	rs12031437	0.38	0.38	0.354	0.354633	0.3996	0.4494	0.3746	0.2322	0.362	0.4	0.47	0.36	0.24	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.645462	NA	NA	0.386864	0.261561	NA	0.362	NA	3.5468693
1297	1	7792411	7792411	C	T	intronic	CAMTA1	NA	NA	NA	intronic	ENSG00000171735	NA	NA	NA	NA	NA	1p36.23	NA	NA	NA	NA	rs2301488	0.47	0.47	0.438	0.455471	0.4533	0.4365	0.4885	0.4334	0.4836	0.46	0.45	0.48	0.5	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.106304	NA	NA	NA	NA	NA	0.42	NA	3.5467
1297	9	127970114	127970114	C	A	intronic	RABEPK	NA	NA	NA	intronic	ENSG00000136933	NA	NA	NA	NA	NA	9q33.3	NA	NA	NA	NA	rs472533	0.52	0.52	0.488	0.521366	0.4533	0.62	0.487	0.5696	0.4489	0.42	0.64	0.49	0.54	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.077565	NA	NA	NA	NA	NA	0.536	NA	3.5467
1297	15	42115019	42115019	C	T	intronic	MAPKBP1	NA	NA	NA	intronic	ENSG00000137802	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs34055060	0.26	0.26	0.242	0.284345	0.4533	0.0357	0.3112	0.2148	0.4417	0.43	0.02	0.32	0.22	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.44938	NA	NA	NA	NA	NA	0.283	NA	3.5467
1297	20	25846228	25846228	A	C	intergenic	FAM182B,LOC100134868	dist=64301;dist=144207	NA	NA	intronic	ENSG00000175170	NA	NA	NA	NA	NA	20p11.1	NA	NA	NA	NA	rs6115348	0.25	0.25	0.172	0.207867	0.1203	0.0129	0.2277	0.4183	0.2004	0.19	0.08	0.32	0.49	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.40124	NA	NA	NA	NA	NA	0.159	NA	3.5463667
1297	6	41708374	41708374	G	A	intronic	PGC	NA	NA	NA	intronic	ENSG00000096088	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs4714509	0.18	0.18	0.165	0.170727	0.1282	0.254	0.2651	0.1256	0.1227	0.13	0.26	0.22	0.13	0.1729	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.37479	1.37479	NA	0.152558	0.140036	NA	0.109	NA	3.546342
1297	16	28845584	28845584	C	T	intronic	ATXN2L	NA	NA	NA	ncRNA_intronic	ENSG00000260570	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs35725751	0.26	0.26	0.267	0.302716	0.2624	0.3075	0.1888	0.2277	0.5215	0.23	0.31	0.23	0.26	0.2672	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.273591	NA	NA	0.257687	0.213853	NA	0.29	NA	3.5460463
1297	15	33895613	33895613	G	T	intronic	RYR3	NA	NA	NA	intronic	ENSG00000198838	NA	NA	NA	NA	NA	15q14	NA	NA	NA	NA	rs2291729	0.15	0.15	0.138	0.135783	0.1541	0.123	0.1138	0.1407	0.1391	0.15	0.12	0.14	0.17	0.1451	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.03502	NA	NA	0.154799	0.117247	NA	0.138	NA	3.546001
1297	16	3434966	3434966	T	C	intronic	ZSCAN32	NA	NA	NA	ncRNA_intronic	ENSG00000262621	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs27231	0.24	0.24	0.214	0.233027	0.2565	0.1468	0.2161	0.2776	0.2495	0.27	0.14	0.22	0.3	0.2583	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.795251	NA	NA	0.272674	0.279144	NA	0.384	NA	3.5458593
1297	6	158359817	158359817	T	G	intronic	SNX9	NA	NA	NA	intronic	ENSG00000130340	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs113710023	NA	NA	NA	0.207268	0.2366	0.1349	0.1297	0.2625	0.2321	NA	NA	NA	NA	0.2176	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.698999	NA	NA	NA	NA	NA	NA	NA	3.5458
1297	1	43357803	43357803	G	T	intergenic	ZNF691,SLC2A1	dist=39657;dist=33243	NA	NA	ncRNA_exonic	ENSG00000237090	NA	NA	NA	NA	NA	1p34.2	NA	NA	NA	NA	rs2792600	NA	NA	0.295	0.322085	0.4543	0.1895	0.2795	0.3298	0.3425	NA	NA	NA	NA	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.69608	NA	NA	NA	NA	NA	0.514	NA	3.5457
1297	4	48565101	48565101	A	T	intronic	FRYL	NA	NA	NA	intronic	ENSG00000075539	NA	NA	NA	NA	NA	4p11	NA	NA	NA	NA	rs13138269	0.48	0.48	0.494	0.554712	0.4543	0.5288	0.3573	0.7027	0.6247	0.45	0.49	0.32	0.66	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.105759	NA	NA	NA	NA	NA	0.558	NA	3.5457
1297	4	68956422	68956422	T	A	intronic	TMPRSS11F	NA	NA	NA	intronic	ENSG00000198092	NA	NA	NA	NA	NA	4q13.2	NA	NA	NA	NA	rs57121360	0.39	0.39	0.367	0.36901	0.4543	0.4067	0.3631	0.261	0.3926	0.45	0.39	0.41	0.27	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.828744	NA	NA	NA	NA	NA	0.326	NA	3.5457
1297	5	70927856	70927856	G	A	intronic	MCCC2	NA	NA	NA	intronic	ENSG00000131844	NA	NA	NA	NA	NA	5q13.2	NA	NA	NA	NA	rs277980	0.39	0.39	0.395	0.395966	0.4543	0.3244	0.3026	0.3835	0.4928	0.46	0.33	0.34	0.41	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.605602	NA	NA	NA	NA	NA	0.399	NA	3.5457
1297	6	152534947	152534947	T	A	intronic	SYNE1	NA	NA	NA	intronic	ENSG00000131018	NA	NA	NA	NA	NA	6q25.2	NA	NA	NA	NA	rs2763029	0.28	0.28	0.301	0.307508	0.4543	0.2351	0.3055	0.2814	0.2679	0.4	0.18	0.29	0.22	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.066235	NA	NA	NA	NA	NA	NA	NA	3.5457
1297	10	97983526	97983526	C	T	intronic	BLNK	NA	NA	NA	intronic	ENSG00000095585	NA	NA	NA	NA	NA	10q24.1	NA	NA	NA	NA	rs10882746	0.42	0.42	0.43	0.439497	0.4543	0.3036	0.3876	0.4962	0.5245	0.45	0.34	0.41	0.48	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.810195	NA	NA	NA	NA	NA	0.478	NA	3.5457
1297	16	20999464	20999464	C	A	intronic	DNAH3	NA	NA	NA	intronic	ENSG00000158486	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs4783517	0.48	0.48	0.478	0.520767	0.4543	0.4851	0.5187	0.5333	0.6104	0.44	0.47	0.49	0.56	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.156834	NA	NA	NA	NA	NA	0.507	NA	3.5457
1297	19	11446520	11446520	T	G	intronic	RAB3D	NA	NA	NA	intronic	ENSG00000105514	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs3816864	0.29	0.29	0.309	0.289337	0.4543	0.1062	0.2478	0.32	0.2965	0.45	0.1	0.28	0.28	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.467936	NA	NA	NA	NA	NA	0.304	NA	3.5457
1297	11	64024048	64024048	G	C	intronic	PLCB3	NA	NA	NA	intronic	ENSG00000149782	NA	NA	NA	NA	NA	11q13.1	NA	NA	NA	NA	rs28395875	0.11	0.11	0.087	0.0902556	0.165	0.1081	0.1225	0.0242	0.0613	0.17	0.11	0.12	0.02	0.1291	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.616398	NA	NA	0.160461	0.050886	NA	0.051	NA	3.545439
1297	19	4310327	4310327	C	T	intronic	FSD1	NA	NA	NA	intronic	ENSG00000105255	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs11879976	0.1	0.1	0.084	0.11881	0.1541	0.0466	0.1484	0.0575	0.2188	0.14	0.07	0.16	0.04	0.1469	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.127901	NA	NA	0.153721	0.067862	NA	0.08	NA	3.545279
1297	11	62460066	62460066	T	C	ncRNA_intronic	HNRNPUL2-BSCL2	NA	NA	NA	intronic	ENSG00000168000,ENSG00000234857	NA	NA	NA	NA	NA	11q12.3	NA	NA	NA	NA	rs2850596	0.74	0.74	0.709	0.747204	0.7883	0.7609	0.8141	0.649	0.7761	0.78	0.78	0.78	0.63	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.620648	NA	NA	NA	NA	NA	0.674	NA	3.5450333
1298	3	129695373	129695373	T	C	intronic	TRH	NA	NA	NA	intronic	ENSG00000170893	NA	NA	NA	NA	NA	3q22.1	NA	NA	NA	NA	rs7645772	0.28	0.28	0.261	0.272165	0.4553	0.2024	0.353	0.0741	0.3661	0.44	0.22	0.33	0.08	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.808662	NA	NA	NA	NA	NA	0.304	NA	3.5447
1298	11	1462217	1462217	C	T	intronic	BRSK2	NA	NA	NA	intronic	ENSG00000174672	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs9651643	0.35	0.35	0.369	0.304712	0.4553	0.0615	0.2983	0.4244	0.2434	0.47	0.06	0.36	0.48	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.210128	NA	NA	NA	NA	NA	0.065	NA	3.5447
1298	17	3638344	3638344	G	A	intronic	ITGAE	NA	NA	NA	intronic	ENSG00000083457	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs9674606	0.35	0.35	0.34	0.336861	0.4553	0.3026	0.3386	0.2481	0.3691	0.46	0.31	0.33	0.23	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.640168	NA	NA	NA	NA	NA	0.399	NA	3.5447
1298	17	3846899	3846899	C	A	intronic	ATP2A3	NA	NA	NA	intronic	ENSG00000074370	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs757611	0.35	0.35	0.31	0.338059	0.4553	0.0843	0.4582	0.4145	0.2904	0.47	0.08	0.49	0.38	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.05826	NA	NA	NA	NA	NA	0.341	NA	3.5447
1298	18	46343818	46343818	T	C	intronic	CTIF	NA	NA	NA	intronic	ENSG00000134030	NA	NA	NA	NA	NA	18q21.1	NA	NA	NA	NA	rs9951895	0.61	0.61	0.569	0.60623	0.4553	0.6389	0.6254	0.7897	0.4663	0.44	0.66	0.63	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.494775	NA	NA	NA	NA	NA	0.5	NA	3.5447
1298	22	19211665	19211665	C	T	intronic	CLTCL1	NA	NA	NA	intronic	ENSG00000070371	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs9604935	0.33	0.33	0.314	0.360823	0.4553	0.2748	0.3991	0.2005	0.5419	0.45	0.24	0.36	0.21	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.106742	NA	NA	NA	NA	NA	0.246	NA	3.5447
1298	10	133976706	133976706	G	T	intronic	JAKMIP3	NA	NA	NA	intronic	ENSG00000188385	NA	NA	NA	NA	NA	10q26.3	NA	Name=HA-E2F1	NA	NA	rs12776458	0.36	0.36	0.325	0.330671	0.4851	0.3234	0.5317	0.1142	0.3292	0.48	0.31	0.48	0.13	0.4526	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.269003	NA	NA	0.517639	0.180222	NA	0.428	NA	3.544661
1298	12	118509138	118509138	A	G	intronic	VSIG10	NA	NA	NA	intronic	ENSG00000176834	NA	NA	NA	NA	NA	12q24.23	NA	NA	NA	NA	rs9669300	0.2	0.2	0.194	0.202276	0.1461	0.253	0.1499	0.2156	0.227	0.16	0.26	0.15	0.23	0.1711	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.069756	NA	NA	0.13815	0.209781	NA	0.174	NA	3.54465
1298	12	7655137	7655137	A	G	exonic	CD163	NA	synonymous SNV	CD163:NM_004244:exon2:c.T70C:p.L24L,CD163:NM_203416:exon2:c.T70C:p.L24L	exonic	ENSG00000177575	NA	synonymous SNV	ENSG00000177575:ENST00000359156:exon2:c.T70C:p.L24L,ENSG00000177575:ENST00000396620:exon2:c.T70C:p.L24L,ENSG00000177575:ENST00000432237:exon2:c.T70C:p.L24L,ENSG00000177575:ENST00000541972:exon2:c.T34C:p.L12L	NA	NA	12p13.31	NA	NA	NA	NA	rs3210140	0.5	0.5	0.455	0.462061	0.7346	0.3829	0.6931	0.1452	0.5276	0.72	0.39	0.67	0.16	0.6676	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.323335	NA	NA	0.719935	0.226942	NA	0.486	NA	3.5445316
1298	18	3214918	3214918	G	C	intronic	MYOM1	NA	NA	NA	ncRNA_intronic	ENSG00000265399	NA	NA	NA	NA	NA	18p11.31	NA	NA	NA	NA	rs7232679	0.27	0.27	0.242	0.286142	0.2416	0.2252	0.2478	0.388	0.2843	0.23	0.21	0.23	0.42	0.2857	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.848929	NA	NA	0.261505	0.350912	NA	0.203	NA	3.5445283
1298	2	228973660	228973660	A	G	intronic	SPHKAP	NA	NA	NA	intronic	ENSG00000153820	NA	NA	NA	Score=385;Name=lod=49	NA	2q36.3	NA	NA	NA	NA	rs7561798	0.5	0.5	0.473	0.478634	0.4751	0.6756	0.6369	0.3064	0.3998	0.45	0.65	0.61	0.33	0.4953	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.221825	NA	NA	0.485116	0.331593	NA	0.543	NA	3.544484
1298	2	165579065	165579065	T	G	intronic	COBLL1	NA	NA	NA	intronic	ENSG00000082438	NA	NA	NA	NA	NA	2q24.3	NA	NA	NA	NA	rs10167778	0.18	0.18	0.184	0.17492	0.1571	0.1052	0.1124	0.3374	0.09	0.16	0.12	0.11	0.34	0.1517	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.516461	NA	NA	0.146799	0.321347	NA	0.217	NA	3.544401
1298	14	106110914	106110914	G	T	intergenic	TMEM121,ELK2AP	dist=114375;dist=25000	NA	NA	exonic	ENSG00000211893	NA	nonsynonymous SNV	ENSG00000211893:ENST00000390545:exon1:c.C214A:p.P72T	NA	NA	14q32.33	NA	NA	NA	NA	rs11627594	0.29	0.29	0.241	0.297324	0.4364	0.5308	0.2651	0.0174	0.3149	0.43	0.35	0.29	0.01	0.3944	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.495244	NA	NA	0.458314	0.092904	NA	0.109	NA	3.5442194
1298	15	48779402	48779402	C	T	intronic	FBN1	NA	NA	NA	intronic	ENSG00000166147	NA	NA	NA	NA	NA	15q21.1	NA	NA	NA	NA	rs11853943	0.21	0.21	0.197	0.196486	0.1461	0.3512	0.1787	0.1604	0.1503	0.14	0.38	0.15	0.15	0.1709	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.33311	NA	NA	0.138966	0.167652	NA	0.13	NA	3.544034
1298	1	220205943	220205943	G	A	ncRNA_intronic	RNU5F-1	NA	NA	NA	intronic	ENSG00000136628	NA	NA	NA	NA	NA	1q41	NA	NA	NA	NA	rs2789816	0.83	0.83	0.83	0.828275	0.7893	0.9375	0.8444	0.7504	0.8497	0.79	0.94	0.83	0.77	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.194677	NA	NA	NA	NA	NA	0.826	NA	3.5440333
1298	11	65391317	65391317	G	A	intronic	PCNXL3	NA	NA	NA	intronic	ENSG00000197136	NA	NA	NA	NA	NA	11q13.1	NA	NA	NA	NA	rs12801636	0.32	0.32	0.298	0.30611	0.2237	0.4266	0.4395	0.2655	0.227	0.22	0.44	0.4	0.26	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.527982	2.527982	NA	0.232558	0.231936	NA	0.268	NA	3.543742
1298	3	179593072	179593072	T	A	intronic	PEX5L	NA	NA	NA	intronic	ENSG00000114757	NA	NA	NA	NA	NA	3q26.33	NA	NA	NA	NA	rs55664665	0.53	0.53	0.485	0.548722	0.4563	0.7917	0.5389	0.3949	0.6084	0.43	0.81	0.49	0.37	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.094725	NA	NA	NA	NA	NA	0.529	NA	3.5437
1298	6	69724069	69724069	G	A	intronic	BAI3	NA	NA	NA	intronic	ENSG00000135298	NA	NA	NA	NA	NA	6q12	NA	NA	NA	NA	rs1336655	0.31	0.31	0.317	0.31849	0.4563	0.0357	0.2594	0.4871	0.2822	0.46	0.04	0.3	0.41	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.029855	NA	NA	NA	NA	NA	0.29	NA	3.5437
1298	7	6641635	6641635	C	T	intronic	C7orf26	NA	NA	NA	intronic	ENSG00000146576	NA	NA	NA	NA	NA	7p22.1	NA	NA	NA	NA	rs13246348	0.29	0.29	0.273	0.225639	0.4563	0.2391	0.2968	0.0726	0.1309	0.44	0.26	0.32	0.08	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.731725	NA	NA	NA	NA	NA	0.333	NA	3.5437
1298	9	127969785	127969785	G	A	intronic	RABEPK	NA	NA	NA	intronic	ENSG00000136933	NA	NA	NA	NA	NA	9q33.3	NA	NA	NA	NA	rs420423	0.53	0.53	0.529	0.537939	0.4563	0.6488	0.5086	0.5787	0.4734	0.42	0.67	0.49	0.55	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.695966	NA	NA	NA	NA	NA	0.565	NA	3.5437
1298	16	90094195	90094195	A	G	intronic	GAS8	NA	NA	NA	intronic	ENSG00000141013	NA	NA	NA	NA	NA	16q24.3	NA	NA	NA	NA	rs3743827	0.6	0.6	0.554	0.589257	0.4563	0.7927	0.6182	0.5197	0.59	0.46	0.85	0.57	0.53	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.358201	NA	NA	NA	NA	NA	0.565	NA	3.5437
1298	X	1404832	1404832	T	G	intronic	CSF2RA	NA	NA	NA	intronic	ENSG00000198223	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs28716068	0.16	0.16	0.14229	NA	NA	NA	NA	NA	NA	0.26	0.11	0.21	0.04	0.2092	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.05827	NA	NA	0.247207	0.072628	NA	0.203	NA	3.543593
1298	5	159841493	159841493	A	T	intronic	SLU7	NA	NA	NA	intronic	ENSG00000164609	NA	NA	NA	NA	NA	5q33.3	NA	NA	NA	NA	rs79791419	0.07	0.07	0.043	0.0656949	0.1103	0.001	0.072	0.0802	0.0624	0.11	0.0017	0.08	0.08	0.2767	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.724915	NA	NA	0.069467	0.054368	NA	0.029	NA	3.543533
1298	19	49520315	49520315	T	C	intronic	LHB	NA	NA	NA	intronic	ENSG00000104826	NA	NA	NA	NA	NA	19q13.33	NA	Name=Egr-1	NA	NA	rs2387589	0.44	0.44	0.373	0.434505	0.4891	0.2758	0.5562	0.3994	0.5031	0.5	0.29	0.53	0.43	0.4829	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.213516	NA	NA	0.484531	0.406945	NA	0.413	NA	3.543469
1298	3	71247304	71247304	A	G	intronic	FOXP1	NA	NA	NA	intronic	ENSG00000114861	NA	NA	NA	NA	NA	3p13	NA	NA	NA	NA	rs2037474	0.27	0.27	0.206	0.282348	0.1362	0.4355	0.3429	0.2723	0.2454	0.13	0.42	0.34	0.26	0.2009	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.24286	NA	NA	0.119651	0.255561	NA	0.123	NA	3.543249
1298	2	165586652	165586652	C	T	intronic	COBLL1	NA	NA	NA	intronic	ENSG00000082438	NA	NA	NA	NA	NA	2q24.3	NA	NA	NA	NA	rs13432439	0.18	0.18	0.183	0.172125	0.1571	0.1052	0.111	0.3275	0.09	0.16	0.12	0.11	0.32	0.1522	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.407106	NA	NA	0.147558	0.309351	ID=COSN166317;OCCURENCE=1(NS)	0.21	NA	3.543142
1298	17	66425995	66425995	T	G	intronic	WIPI1	NA	NA	NA	ncRNA_intronic	ENSG00000267009	NA	NA	NA	NA	NA	17q24.2	NA	NA	NA	NA	rs3785610	0.78	0.78	0.739	0.775559	0.7903	0.6865	0.8458	0.8238	0.7372	0.8	0.68	0.84	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.79742	NA	NA	NA	NA	NA	NA	NA	3.5430333
1298	17	66425997	66425997	C	T	intronic	WIPI1	NA	NA	NA	ncRNA_intronic	ENSG00000267009	NA	NA	NA	NA	NA	17q24.2	NA	NA	NA	NA	rs3785611	0.78	0.78	0.742	0.775559	0.7903	0.6865	0.8458	0.8238	0.7372	0.8	0.68	0.84	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.789573	NA	NA	NA	NA	NA	NA	NA	3.5430333
1298	11	93754508	93754508	G	A	UTR5	HEPHL1	NM_001098672:c.-27G>A	NA	NA	upstream	ENSG00000181333	NA	NA	NA	NA	NA	11q21	NA	Name=Pol2(b)	Name=11	NA	rs2511403	0.74	0.74	0.732	0.748403	0.8201	0.7738	0.8285	0.5522	0.8569	0.84	0.75	0.83	0.52	0.8135	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.215218	NA	NA	0.823458	0.601682	NA	0.703	NA	3.542942
1298	10	118363642	118363642	T	C	exonic	PNLIPRP1	NA	synonymous SNV	PNLIPRP1:NM_006229:exon11:c.T1164C:p.S388S	exonic	ENSG00000187021	NA	synonymous SNV	ENSG00000187021:ENST00000534537:exon10:c.T1164C:p.S388S,ENSG00000187021:ENST00000358834:exon11:c.T1164C:p.S388S,ENSG00000187021:ENST00000528052:exon11:c.T1164C:p.S388S	NA	NA	10q25.3	NA	NA	NA	NA	rs3010501	0.72	0.72	0.706	0.70627	0.6918	0.8988	0.7637	0.5363	0.7117	0.68	0.89	0.73	0.55	0.7192	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.199587	NA	NA	0.712791	0.566954	NA	0.739	NA	3.5428756
1298	19	55493095	55493095	C	G	intronic	NLRP2	NA	NA	NA	intronic	ENSG00000022556	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs17781858	0.21	0.21	0.209	0.173123	0.1521	0.3601	0.1585	0.1067	0.1022	0.15	0.41	0.14	0.12	0.1593	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.506674	NA	NA	0.145814	0.113482	NA	0.196	NA	3.542786
1298	3	41279440	41279440	A	G	intronic	CTNNB1	NA	NA	NA	intronic	ENSG00000168036	NA	NA	NA	NA	NA	3p22.1	NA	NA	NA	NA	rs4135385	0.26	0.26	0.225	0.232827	0.2366	0.5308	0.2795	0.0113	0.1881	0.23	0.52	0.24	0.02	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.850945	NA	NA	0.220616	0.051301	NA	0.188	NA	3.542784
1298	17	45755810	45755810	G	A	intronic	KPNB1	NA	NA	NA	intronic	ENSG00000108424	NA	NA	NA	NA	NA	17q21.32	NA	NA	Name=2	NA	rs4239162	0.49	0.49	0.521	0.511581	0.4732	0.4435	0.4236	0.6634	0.4785	0.47	0.46	0.46	0.57	0.4906	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.617395	NA	NA	0.493488	0.600772	NA	0.486	NA	3.542712
1298	1	183104013	183104013	G	A	intronic	LAMC1	NA	NA	NA	intronic	ENSG00000135862	NA	NA	NA	NA	NA	1q25.3	NA	NA	NA	NA	rs2296299	NA	NA	NA	0.429912	0.4573	0.5188	0.4063	0.3729	0.4039	NA	NA	NA	NA	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.007273	NA	NA	NA	NA	NA	0.442	NA	3.5427
1298	5	170162666	170162666	T	C	intronic	KCNIP1	NA	NA	NA	intronic	ENSG00000182132	NA	NA	NA	NA	NA	5q35.1	NA	NA	NA	NA	rs1363712	0.27	0.27	0.243	0.235224	0.4573	0.0486	0.3415	0.1581	0.228	0.46	0.04	0.41	0.13	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.173817	NA	NA	NA	NA	NA	0.283	NA	3.5427
1298	6	148853867	148853867	T	C	intronic	SASH1	NA	NA	NA	intronic	ENSG00000111961	NA	NA	NA	NA	NA	6q24.3	NA	NA	NA	NA	rs1465307	0.45	0.45	0.426	0.477636	0.4573	0.4544	0.5173	0.407	0.59	0.48	0.42	0.51	0.4	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.204471	NA	NA	NA	NA	NA	0.457	NA	3.5427
1298	9	95648430	95648430	C	T	intergenic	ZNF484,FGD3	dist=8110;dist=61171	NA	NA	ncRNA_exonic	ENSG00000226668	NA	NA	NA	NA	NA	9q22.31	NA	NA	NA	NA	rs2281716	0.53	0.53	0.485	0.52516	0.4573	0.6171	0.5447	0.5598	0.4397	0.42	0.62	0.57	0.58	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.60368	NA	NA	NA	NA	NA	0.261	NA	3.5427
1298	16	68718367	68718367	T	C	intronic	CDH3	NA	NA	NA	intronic	ENSG00000062038	NA	NA	NA	NA	NA	16q22.1	NA	NA	NA	NA	rs4783661	0.43	0.43	0.396	0.402356	0.4573	0.5546	0.4409	0.1687	0.4775	0.47	0.59	0.45	0.17	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.368872	NA	NA	NA	NA	NA	0.486	NA	3.5427
1298	17	25601156	25601156	T	C	intergenic	NONE,MIR4522	dist=NONE;dist=19780	NA	NA	ncRNA_exonic	ENSG00000239223	NA	NA	NA	NA	NA	17q11.1	NA	NA	NA	NA	rs34645010	0.48	0.48	NA	0.549121	0.4573	0.2688	0.4222	0.8495	0.6166	0.44	0.26	0.43	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.639222	NA	NA	NA	NA	NA	0.087	NA	3.5427
1298	6	6196142	6196142	G	A	intronic	F13A1	NA	NA	NA	intronic	ENSG00000124491	NA	NA	NA	NA	NA	6p25.1	NA	NA	NA	NA	rs5977	0.11	0.11	0.133	0.160343	0.1342	0.2143	0.1268	0.0257	0.3374	0.12	0.2	0.09	0.03	0.1716	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.083683	NA	NA	0.151512	0.049251	NA	NA	NA	3.542688
1298	2	95952641	95952641	A	G	intronic	PROM2	NA	NA	NA	intronic	ENSG00000155066	NA	NA	NA	NA	NA	2q11.1	NA	NA	NA	NA	rs1006021	0.23	0.23	0.182	0.234425	0.1372	0.1776	0.3804	0.3555	0.1258	0.14	0.18	0.35	0.36	0.1835	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.41022	1.41022	NA	0.137093	0.32433	NA	0.159	NA	3.542207
1298	16	27476548	27476548	G	A	intronic	GTF3C1	NA	NA	NA	intronic	ENSG00000077235	NA	NA	NA	NA	NA	16p12.1	NA	NA	NA	NA	rs12925626	0.15	0.15	0.134	0.141973	0.162	0.001	0.2075	0.2746	0.0409	0.17	NA	0.19	0.26	0.1426	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.789975	NA	NA	0.153256	0.247155	NA	0.123	NA	3.542144
1298	1	17593144	17593144	C	G	intronic	PADI3	NA	NA	NA	intronic	ENSG00000142619	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs2272628	0.49	0.49	0.478	0.527756	0.4583	0.4405	0.4222	0.6339	0.6207	0.44	0.44	0.44	0.64	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.023118	NA	NA	NA	NA	NA	0.514	NA	3.5417
1298	2	228758456	228758456	C	A	intronic	DAW1	NA	NA	NA	intronic	ENSG00000123977	NA	NA	NA	NA	NA	2q36.3	NA	NA	NA	NA	rs35758334	0.4	0.4	0.37	0.405551	0.4583	0.4613	0.6009	0.1551	0.4939	0.45	0.44	0.56	0.16	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.633845	NA	NA	NA	NA	NA	0.428	NA	3.5417
1298	3	42754912	42754912	A	G	intronic	CCDC13	NA	NA	NA	intronic	ENSG00000244607	NA	NA	NA	NA	NA	3p22.1	NA	NA	NA	NA	rs3895740	0.5	0.5	0.489	0.525359	0.4583	0.4653	0.4092	0.6233	0.6063	0.46	0.49	0.47	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.615298	NA	NA	NA	NA	NA	0.514	NA	3.5417
1298	4	187561080	187561080	A	G	intronic	FAT1	NA	NA	NA	intronic	ENSG00000083857	NA	NA	NA	NA	NA	4q35.2	NA	NA	NA	NA	rs10001377	0.49	0.49	0.452	0.446885	0.4583	0.6042	0.5317	0.3585	0.3323	0.45	0.63	0.52	0.38	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.48539	NA	NA	NA	NA	NA	0.399	NA	3.5417
1298	5	70807991	70807991	G	A	intronic	BDP1	NA	NA	NA	intronic	ENSG00000145734	NA	NA	NA	NA	NA	5q13.2	NA	NA	NA	NA	rs418738	0.4	0.4	0.383	0.399561	0.4583	0.3621	0.3055	0.3797	0.4714	0.46	0.38	0.33	0.37	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.297186	NA	NA	NA	NA	NA	0.377	NA	3.5417
1298	5	82499307	82499307	G	A	intronic	XRCC4	NA	NA	NA	intronic	ENSG00000152422	NA	NA	NA	NA	NA	5q14.2	NA	NA	NA	NA	rs2662238	0.33	0.33	0.311	0.358427	0.4583	0.2183	0.2579	0.2905	0.5634	0.46	0.23	0.28	0.29	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.346832	NA	NA	NA	NA	NA	0.348	NA	3.5417
1298	7	101977945	101977945	C	T	intergenic	SH2B2,SPDYE6	dist=15767;dist=8247	NA	NA	ncRNA_intronic	ENSG00000228546	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs803118	0.53	0.53	0.49	0.541733	0.4583	0.5764	0.4986	0.6581	0.4652	0.45	0.56	0.49	0.62	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.820004	NA	NA	NA	NA	NA	0.232	NA	3.5417
1298	7	150915533	150915533	C	T	intronic	ABCF2	NA	NA	NA	intronic	ENSG00000033050	NA	NA	NA	NA	NA	7q36.1	NA	NA	NA	NA	rs3800793	0.46	0.46	0.411	0.420327	0.4583	0.7202	0.4107	0.211	0.362	0.45	0.68	0.43	0.23	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.000894	NA	NA	NA	NA	NA	0.435	NA	3.5417
1298	10	95658258	95658258	C	G	intronic	SLC35G1	NA	NA	NA	intronic	ENSG00000176273	NA	NA	NA	NA	NA	10q23.33	NA	NA	NA	NA	rs11187724	0.56	0.56	0.517	0.53115	0.4583	0.8611	0.5043	0.3033	0.593	0.49	0.87	0.52	0.33	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.33889	NA	NA	NA	NA	NA	0.449	NA	3.5417
1298	12	120567406	120567406	C	A	intronic	GCN1L1	NA	NA	NA	intronic	ENSG00000089154	NA	NA	NA	NA	NA	12q24.23	NA	NA	NA	NA	rs2240312	0.35	0.35	0.335	0.366414	0.4583	0.3998	0.4236	0.0794	0.5849	0.46	0.38	0.41	0.1	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.765013	NA	NA	NA	NA	NA	0.268	NA	3.5417
1298	15	20467908	20467908	G	A	intergenic	NONE,CHEK2P2	dist=NONE;dist=20089	NA	NA	ncRNA_intronic	ENSG00000258628	NA	NA	NA	NA	NA	15q11.1	NA	NA	NA	NA	rs2722118	NA	NA	0.309	0.445887	0.4583	0.4474	0.4438	0.4244	0.4622	NA	NA	NA	NA	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.854622	NA	NA	NA	NA	NA	0.37	NA	3.5417
1298	18	10485363	10485363	T	C	intronic	APCDD1	NA	NA	NA	intronic	ENSG00000154856	NA	NA	NA	NA	NA	18p11.22	NA	NA	NA	NA	rs91958	0.57	0.57	0.551	0.5623	0.4583	0.6419	0.5476	0.6815	0.4366	0.47	0.66	0.54	0.65	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.302185	NA	NA	NA	NA	NA	0.587	NA	3.5417
1298	18	10485369	10485369	G	A	intronic	APCDD1	NA	NA	NA	intronic	ENSG00000154856	NA	NA	NA	NA	NA	18p11.22	NA	NA	NA	NA	rs91959	0.57	0.57	0.559	0.5625	0.4583	0.6419	0.549	0.6815	0.4366	0.47	0.66	0.54	0.65	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.687513	NA	NA	NA	NA	NA	0.587	NA	3.5417
1298	21	37604976	37604976	G	A	intronic	DOPEY2	NA	NA	NA	intronic	ENSG00000142197	NA	NA	NA	NA	NA	21q22.12	NA	NA	NA	NA	rs2239570	0.34	0.34	0.329	0.348043	0.4583	0.4306	0.3487	0.0681	0.5276	0.45	0.42	0.36	0.07	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.786595	NA	NA	NA	NA	NA	0.413	NA	3.5417
1298	19	4684642	4684642	A	G	UTR3	LOC100131094	NM_001242901:c.*786A>G	NA	NA	ncRNA_exonic	ENSG00000205790	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs8105807	0.39	0.39	0.413	0.442492	0.325	0.2321	0.3213	0.7821	0.407	0.32	0.24	0.29	0.74	0.3465	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.687926	NA	NA	0.287183	0.67407	NA	0.543	NA	3.541317
1298	6	160557569	160557569	C	T	intronic	SLC22A1	NA	NA	NA	intronic	ENSG00000175003	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs7762846	0.1	0.1	0.09	0.095647	0.1531	0.003	0.1081	0.1059	0.1094	0.15	0.0017	0.13	0.11	0.1356	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.05122	NA	NA	0.17	0.110985	NA	0.123	NA	3.5413
1298	12	96284650	96284650	A	G	exonic	CCDC38	NA	synonymous SNV	CCDC38:NM_182496:exon9:c.T831C:p.A277A	exonic	ENSG00000165972	NA	synonymous SNV	ENSG00000165972:ENST00000344280:exon9:c.T831C:p.A277A	NA	NA	12q23.1	NA	NA	NA	NA	rs6538681	0.74	0.74	0.742	0.754393	0.7058	0.745	0.536	0.9145	0.7526	0.73	0.72	0.57	0.91	0.7179	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.050229	NA	NA	0.70186	0.879256	NA	0.703	NA	3.5411066
1298	6	30670292	30670292	C	T	intronic	MDC1	NA	NA	NA	intronic	ENSG00000137337	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs9405048	0.16	0.16	0.128	0.133786	0.1421	0.2996	0.2104	0.0106	0.0665	0.14	0.27	0.2	0.01	0.1709	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.002386	4.002386	NA	0.145995	0.031478	NA	0.116	NA	3.541005
1298	19	49148781	49148781	C	T	ncRNA_intronic	SEC1P	NA	NA	NA	ncRNA_intronic	ENSG00000232871	NA	NA	NA	NA	NA	19q13.33	NA	NA	Name=6	NA	rs10426317	0.47	0.47	0.451	0.421526	0.7346	0.2569	0.4265	0.2103	0.5511	0.74	0.3	0.49	0.25	0.6471	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.386258	NA	NA	0.744067	0.285974	NA	0.449	NA	3.5408996
1298	3	42793337	42793337	T	C	intronic	CCDC13	NA	NA	NA	intronic	ENSG00000244607	NA	NA	NA	NA	NA	3p22.1	NA	NA	NA	NA	rs11929390	0.48	0.48	0.481	0.500599	0.4592	0.4514	0.4006	0.5431	0.6074	0.46	0.47	0.46	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.252105	NA	NA	NA	NA	NA	0.493	NA	3.5408
1298	5	1060379	1060379	G	A	intronic	SLC12A7	NA	NA	NA	intronic	ENSG00000113504	NA	NA	NA	NA	NA	5p15.33	NA	NA	NA	NA	rs35661060	0.35	0.35	0.335	0.339058	0.4592	0.3512	0.402	0.1203	0.454	0.48	0.33	0.4	0.12	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.830739	NA	NA	NA	NA	NA	0.275	NA	3.5408
1298	8	21835465	21835465	A	G	intronic	XPO7	NA	NA	NA	intronic	ENSG00000130227	NA	NA	NA	NA	NA	8p21.3	NA	NA	NA	NA	rs733543	0.35	0.35	0.341	0.294928	0.4592	0.3998	0.2118	0.2201	0.1779	0.46	0.38	0.24	0.23	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.635844	NA	NA	NA	NA	NA	0.442	NA	3.5408
1298	17	18863105	18863105	C	T	intronic	SLC5A10	NA	NA	NA	intronic	ENSG00000154025	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs2074276	0.42	0.42	0.401	0.378594	0.4592	0.5218	0.4438	0.2519	0.273	0.43	0.48	0.49	0.28	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.341596	NA	NA	NA	NA	NA	0.435	NA	3.5408
1298	18	10485357	10485357	T	C	intronic	APCDD1	NA	NA	NA	intronic	ENSG00000154856	NA	NA	NA	NA	NA	18p11.22	NA	NA	NA	NA	rs489837	0.58	0.58	0.564	0.571685	0.4592	0.6419	0.5519	0.7141	0.4366	0.47	0.66	0.54	0.69	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.374888	NA	NA	NA	NA	NA	0.587	NA	3.5408
1298	18	21120035	21120035	T	C	intronic	NPC1	NA	NA	NA	intronic	ENSG00000141458	NA	NA	NA	NA	NA	18q11.2	NA	NA	NA	NA	rs7239575	0.59	0.59	0.557	0.586661	0.4592	0.6111	0.6297	0.73	0.4683	0.47	0.64	0.58	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.285113	NA	NA	NA	NA	NA	0.638	NA	3.5408
1298	19	55346629	55346629	C	T	intronic	KIR2DS4	NA	NA	NA	intronic	ENSG00000167633,ENSG00000221957	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs139958085	0.1	0.1	0.099	0.106629	0.2455	0.0119	0.1441	0.0946	0.0511	0.21	0.01	0.12	0.05	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.687703	NA	NA	0.213731	0.127753	NA	0.094	NA	3.540769
1298	7	51094216	51094216	C	T	intronic	COBL	NA	NA	NA	intronic	ENSG00000106078	NA	NA	NA	NA	NA	7p12.1	NA	NA	NA	NA	rs2285841	0.22	0.22	0.22	0.249601	0.1481	0.1131	0.2536	0.4433	0.2301	0.14	0.1	0.23	0.48	0.1858	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.49409	NA	NA	0.125465	0.406037	ID=COSN168056;OCCURENCE=1(large_intestine)	0.319	NA	3.540635
1298	6	154567676	154567676	G	A	intronic	IPCEF1,OPRM1	NA	NA	NA	intronic	ENSG00000074706,ENSG00000112038	NA	NA	NA	NA	NA	6q25.2	NA	NA	NA	NA	rs7759388	0.1	0.1	0.096	0.0842652	0.166	NA	0.1124	0.09	0.0593	0.16	NA	0.13	0.09	0.1332	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.408029	NA	NA	0.160698	0.1069	NA	0.101	NA	3.540102
1298	2	39944055	39944055	G	A	intronic	TMEM178A	NA	NA	NA	intronic	ENSG00000152154	NA	NA	NA	NA	NA	2p22.1	NA	NA	NA	NA	rs2540229	0.67	0.67	0.673	0.682708	0.4602	0.8115	0.6571	0.8185	0.6135	0.49	0.82	0.63	0.8	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.352857	NA	NA	NA	NA	NA	0.565	NA	3.5398
1298	4	169392803	169392803	T	C	intronic	DDX60L	NA	NA	NA	intronic	ENSG00000181381	NA	NA	NA	NA	NA	4q32.3	NA	NA	NA	NA	rs7670367	0.39	0.39	0.382	0.408347	0.4602	0.2808	0.2709	0.444	0.5358	0.47	0.26	0.3	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.039834	NA	NA	NA	NA	NA	0.442	NA	3.5398
1298	5	82407098	82407098	G	A	intronic	XRCC4	NA	NA	NA	intronic	ENSG00000152422	NA	NA	NA	NA	NA	5q14.2	NA	NA	NA	NA	rs1478482	0.4	0.4	0.414	0.461062	0.4602	0.1974	0.2839	0.6876	0.5532	0.45	0.19	0.32	0.64	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.702239	NA	NA	NA	NA	NA	0.442	NA	3.5398
1298	7	803342	803342	G	A	intronic	HEATR2	NA	NA	NA	intronic	ENSG00000164818	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs4495324	0.42	0.42	0.396	0.396166	0.4602	0.3532	0.4424	0.3533	0.3998	0.44	0.36	0.44	0.43	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.128415	NA	NA	NA	NA	NA	0.362	NA	3.5398
1298	12	48376503	48376503	C	T	intronic	COL2A1	NA	NA	NA	intronic	ENSG00000139219	NA	NA	NA	NA	NA	12q13.11	NA	NA	NA	NA	rs3829736	0.45	0.45	0.413	0.455671	0.4602	0.5536	0.3631	0.3941	0.499	0.46	0.57	0.37	0.36	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.389267	NA	NA	NA	NA	NA	0.428	NA	3.5398
1298	12	48376530	48376530	C	A	intronic	COL2A1	NA	NA	NA	intronic	ENSG00000139219	NA	NA	NA	NA	NA	12q13.11	NA	NA	NA	NA	rs11168337	0.48	0.48	0.433	0.501597	0.4602	0.5694	0.3718	0.466	0.6145	0.46	0.59	0.38	0.45	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.161052	NA	NA	NA	NA	NA	0.464	NA	3.5398
1298	14	81307218	81307218	T	G	intronic	CEP128	NA	NA	NA	intronic	ENSG00000100629	NA	NA	NA	NA	NA	14q31.1	NA	NA	NA	NA	rs7142753	0.38	0.38	0.347	0.358427	0.4602	0.37	0.389	0.2655	0.3456	0.46	0.34	0.43	0.26	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.009464	NA	NA	NA	NA	NA	0.312	NA	3.5398
1298	17	9821249	9821249	C	T	intronic	GAS7	NA	NA	NA	intronic	ENSG00000007237	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs11078822	0.37	0.37	0.33	0.33726	0.4602	0.4435	0.4467	0.0666	0.3896	0.47	0.45	0.44	0.07	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.683564	NA	NA	NA	NA	NA	0.312	NA	3.5398
1298	17	78061979	78061979	A	C	intronic	CCDC40	NA	NA	NA	intronic	ENSG00000141519	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs12942049	0.3	0.3	0.286	0.309505	0.4602	0.2222	0.3761	0.1157	0.4591	0.47	0.19	0.37	0.14	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.816161	NA	NA	NA	NA	NA	0.333	NA	3.5398
1298	18	34273440	34273440	C	T	intronic	FHOD3	NA	NA	NA	intronic	ENSG00000134775	NA	NA	NA	NA	NA	18q12.2	NA	NA	NA	NA	rs483351	0.51	0.51	0.514	0.476238	0.4602	0.6488	0.402	0.4206	0.4427	0.48	0.64	0.43	0.44	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.762927	NA	NA	NA	NA	NA	0.348	NA	3.5398
1298	3	125650439	125650439	T	C	intronic	ALG1L	NA	NA	NA	intronic	ENSG00000189366	NA	NA	NA	NA	NA	3q21.2	NA	NA	NA	NA	rs35696724	0.14	0.14	0.104	0.144369	0.168	0.1379	0.1124	0.1505	0.1411	0.16	0.11	0.14	0.14	0.1374	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.847033	NA	NA	0.154844	0.123348	NA	0.065	NA	3.539756
1298	19	46350960	46350960	A	G	intronic	SYMPK	NA	NA	NA	intronic	ENSG00000125755	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs3745928	0.14	0.14	0.132	0.144569	0.1571	0.0913	0.2349	0.1082	0.1718	0.16	0.08	0.21	0.12	0.1561	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.652886	NA	NA	0.147093	0.107581	NA	0.072	NA	3.539707
1298	11	2016659	2016659	T	C	ncRNA_exonic	H19	NA	NA	NA	ncRNA_exonic	ENSG00000130600	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs2839704	0.31	0.31	0.285	0.26877	0.3976	0.3343	0.3617	0.0794	0.2587	0.42	0.33	0.35	0.1	0.3381	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.452288	NA	NA	0.391654	0.120571	NA	0.304	NA	3.5393126
1298	5	145483713	145483713	C	T	intronic	PLAC8L1	NA	NA	NA	ncRNA_intronic	ENSG00000251556	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs12187128	0.2	0.2	0.156	0.181709	0.2525	0.1984	0.3775	0.0076	0.1881	0.25	0.2	0.3	0.02	0.2633	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.204366	NA	NA	0.278256	0.059918	ID=COSN167581;OCCURENCE=1(large_intestine)	0.261	NA	3.5392773
1298	3	108324365	108324365	C	T	intronic	DZIP3	NA	NA	NA	intronic	ENSG00000198919	NA	NA	NA	NA	NA	3q13.13	NA	NA	NA	NA	rs41267019	0.28	0.28	0.283	0.307907	0.2197	0.4554	0.3012	0.2413	0.3415	0.22	0.39	0.29	0.22	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.239371	NA	NA	0.241043	0.251445	NA	0.225	NA	3.539257
1298	1	1635619	1635619	T	C	intronic	CDK11A,CDK11B	NA	NA	NA	ncRNA_intronic	ENSG00000268575	NA	NA	NA	NA	NA	1p36.33	NA	Name=ERalpha_a	NA	NA	rs2076329	0.62	0.62	0.611	0.646965	0.5924	0.4673	0.5591	0.9395	0.5552	0.58	0.45	0.56	0.92	0.6106	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.287422	NA	NA	0.591152	0.89553	NA	0.457	NA	3.5391813
1298	1	118617274	118617274	C	T	intronic	SPAG17	NA	NA	NA	intronic	ENSG00000155761	NA	NA	NA	NA	NA	1p12	NA	NA	Name=2	NA	rs1935993	0.42	0.42	0.408	0.428315	0.4881	0.1696	0.4625	0.6006	0.3763	0.49	0.14	0.49	0.59	0.4667	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.647716	1.647716	NA	0.506164	0.595778	NA	0.623	NA	3.539036
1298	1	47767141	47767141	C	A	intronic	STIL	NA	NA	NA	intronic	ENSG00000123473	NA	NA	NA	NA	NA	1p33	NA	NA	NA	NA	rs6689687	0.61	0.61	0.617	0.613618	0.4612	0.5843	0.5965	0.8858	0.4448	0.47	0.6	0.57	0.85	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.119643	NA	NA	NA	NA	NA	0.594	NA	3.5388
1298	7	101967698	101967698	C	A	intergenic	SH2B2,SPDYE6	dist=5520;dist=18494	NA	NA	ncRNA_exonic	ENSG00000170409	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs803103	0.49	0.49	0.511	0.565895	0.4612	0.5794	0.5086	0.7375	0.4683	0.41	0.53	0.47	0.59	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.351394	NA	NA	NA	NA	NA	0.536	NA	3.5388
1298	11	2016662	2016662	T	C	ncRNA_exonic	H19	NA	NA	NA	ncRNA_exonic	ENSG00000130600	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs2839703	0.31	0.31	0.274	0.26897	0.3986	0.3343	0.3617	0.0794	0.2587	0.42	0.32	0.35	0.1	0.3378	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.090334	NA	NA	0.391654	0.120571	NA	0.297	NA	3.5386126
1298	15	25324141	25324141	C	T	upstream	SNORD116-13	NA	NA	NA	ncRNA_exonic	ENSG00000224078	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs4344720	0.64	0.64	0.661	0.616014	0.6282	0.5536	0.6643	0.7859	0.4039	0.63	0.55	0.68	0.75	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.489522	NA	NA	NA	NA	NA	0.659	NA	3.5384666
1298	15	45457106	45457106	G	T	UTR3	DUOX1	NM_017434:c.*7G>T,NM_175940:c.*7G>T	NA	NA	ncRNA_UTR3	ENSG00000137857	NA	NA	NA	NA	NA	15q21.1	NA	NA	NA	NA	rs12438755	0.28	0.28	0.258	0.258786	0.333	0.3323	0.4135	0.0976	0.2147	0.33	0.3	0.35	0.11	0.3094	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5.001702	5.001702	NA	0.319218	0.124204	NA	0.239	NA	3.538382
1298	6	32362832	32362832	G	A	intronic	BTNL2	NA	NA	NA	intronic	ENSG00000204290	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs17202435	0.16	0.16	0.146	0.163938	0.163	0.1587	0.1599	0.1422	0.2025	0.16	0.18	0.18	0.12	0.1554	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.439559	NA	NA	0.143488	0.12483	NA	0.196	NA	3.538112
1298	1	57170229	57170229	T	C	intronic	PRKAA2	NA	NA	NA	intronic	ENSG00000162409	NA	NA	NA	NA	NA	1p32.2	NA	NA	NA	NA	rs932447	0.33	0.33	0.338	0.291134	0.4622	0.1577	0.2839	0.329	0.2065	0.45	0.18	0.32	0.34	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.207292	NA	NA	NA	NA	NA	0.37	NA	3.5378
1298	3	64617070	64617070	C	T	intronic	ADAMTS9	NA	NA	NA	intronic	ENSG00000163638	NA	NA	NA	NA	NA	3p14.1	NA	NA	NA	NA	rs6445420	0.73	0.73	0.741	0.757588	0.4622	0.9325	0.7089	0.9675	0.6319	0.45	0.94	0.69	0.96	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.884307	NA	NA	NA	NA	NA	0.775	NA	3.5378
1298	6	32974843	32974843	C	T	intronic	HLA-DOA	NA	NA	NA	intronic	ENSG00000204252	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs6913008	0.14	0.14	0.118	0.150559	0.16	0.1895	0.1844	0.0908	0.1575	0.16	0.16	0.15	0.08	0.1488	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.135314	NA	NA	0.153551	0.103456	NA	0.087	NA	3.537649
1298	7	98602990	98602990	G	C	intronic	TRRAP	NA	NA	NA	intronic	ENSG00000196367	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs219838	0.33	0.33	0.345	0.326478	0.1421	0.2133	0.2363	0.7753	0.09	0.14	0.24	0.26	0.77	0.1913	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.06322	NA	NA	0.129186	0.665002	NA	0.333	NA	3.537414
1298	4	8229713	8229713	A	G	exonic	SH3TC1	NA	synonymous SNV	SH3TC1:NM_018986:exon12:c.A2292G:p.Q764Q	exonic	ENSG00000125089	NA	synonymous SNV	ENSG00000125089:ENST00000245105:exon12:c.A2292G:p.Q764Q,ENSG00000125089:ENST00000539824:exon12:c.A2064G:p.Q688Q	NA	NA	4p16.1	NA	NA	NA	NA	rs1281148	0.53	0.53	0.518	0.516573	0.7177	0.5139	0.5202	0.2421	0.681	0.72	0.48	0.59	0.26	0.6508	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.395815	NA	NA	0.76088	0.329927	NA	0.652	NA	3.5372866
1298	7	101917647	101917647	A	G	intronic	CUX1	NA	NA	NA	intronic	ENSG00000257923	NA	NA	NA	NA	NA	7q22.1	NA	Name=ZNF263	NA	NA	rs712839	0.73	0.73	0.769	0.734225	0.7227	0.5228	0.6599	0.9788	0.6861	0.75	0.52	0.72	0.98	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.447281	NA	NA	0.740101	0.937139	NA	0.761	NA	3.537199
1298	3	196455682	196455682	G	A	intronic	PIGX	NA	NA	NA	intronic	ENSG00000163964	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs71323744	0.13	0.13	0.128	0.129992	0.2276	0.001	0.1585	0.1248	0.1493	0.21	NA	0.2	0.12	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.581431	NA	NA	0.235387	0.164017	NA	0.13	NA	3.537013
1298	2	10912153	10912153	T	G	intronic	ATP6V1C2	NA	NA	NA	intronic	ENSG00000143882	NA	NA	NA	NA	NA	2p25.1	NA	NA	NA	NA	rs2171773	0.39	0.39	0.383	0.363219	0.4632	0.3304	0.4179	0.3253	0.3067	0.46	0.37	0.41	0.31	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.086174	NA	NA	NA	NA	NA	0.442	NA	3.5368
1298	6	36290030	36290030	C	G	intronic	C6orf222	NA	NA	NA	intronic	ENSG00000189325	NA	NA	NA	NA	NA	6p21.31	NA	NA	NA	NA	rs12190546	0.3	0.3	0.294	0.287939	0.4632	0.1508	0.2983	0.2458	0.2986	0.46	0.12	0.3	0.25	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.32937	NA	NA	NA	NA	NA	0.391	NA	3.5368
1298	6	168688281	168688281	T	G	intergenic	FRMD1,DACT2	dist=208442;dist=19303	NA	NA	ncRNA_exonic	ENSG00000230711	NA	NA	NA	NA	NA	6q27	NA	NA	NA	NA	rs9456019	0.29	0.29	0.247	0.252995	0.4632	0.2083	0.3516	0.0272	0.318	0.46	0.22	0.35	0.04	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.143059	NA	NA	NA	NA	NA	0.203	NA	3.5368
1298	9	141038018	141038018	G	A	intergenic	CACNA1B,TUBBP5	dist=18942;dist=6547	NA	NA	ncRNA_exonic	ENSG00000229926	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs60011774	0.38	0.38	0.354	0.396565	0.4632	0.3224	0.5735	0.32	0.3824	0.45	0.27	0.5	0.32	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.140123	NA	NA	NA	NA	NA	0.304	NA	3.5368
1298	15	31359457	31359457	T	G	intronic	TRPM1	NA	NA	NA	intronic	ENSG00000134160	NA	NA	NA	NA	NA	15q13.3	NA	NA	NA	NA	rs3784599	0.54	0.54	0.503	0.504193	0.4632	0.8006	0.5274	0.3313	0.4581	0.46	0.84	0.52	0.32	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.40087	NA	NA	NA	NA	NA	0.507	NA	3.5368
1298	15	62228696	62228696	G	C	intronic	VPS13C	NA	NA	NA	intronic	ENSG00000129003	NA	NA	NA	NA	NA	15q22.2	NA	NA	NA	NA	rs11071641	0.44	0.44	0.441	0.444888	0.4632	0.4653	0.3285	0.466	0.4591	0.46	0.45	0.35	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.270372	NA	NA	NA	NA	NA	0.507	NA	3.5368
1298	1	76313874	76313874	C	T	intronic	MSH4	NA	NA	NA	intronic	ENSG00000057468	NA	NA	NA	NA	NA	1p31.1	NA	NA	NA	NA	rs2047435	0.26	0.26	0.231	0.233027	0.1402	0.2698	0.3372	0.3207	0.0982	0.14	0.34	0.3	0.31	0.1866	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.177064	2.177064	NA	0.13648	0.282115	NA	0.116	NA	3.53672
1298	10	60273121	60273121	T	C	intronic	BICC1	NA	NA	NA	intronic	ENSG00000122870	NA	NA	NA	NA	NA	10q21.1	NA	NA	Name=36	NA	rs7100474	0.5	0.5	0.514	0.519169	0.497	0.4762	0.3285	0.6316	0.5695	0.49	0.48	0.36	0.65	0.492	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.758215	NA	NA	0.474302	0.593509	NA	0.435	NA	3.536698
1298	17	30321567	30321567	T	G	intronic	SUZ12	NA	NA	NA	intronic	ENSG00000178691	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs1557731	0.14	0.14	0.129	0.162141	0.1531	0.001	0.1081	0.3238	0.1575	0.15	NA	0.12	0.3	0.1643	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.650795	NA	NA	0.146047	0.274626	NA	0.217	NA	3.536553
1298	2	231115790	231115790	G	A	intronic	SP140	NA	NA	NA	intronic	ENSG00000079263	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs9989746	0.1	0.1	0.085	0.086262	0.1521	0.001	0.1066	0.0514	0.1391	0.16	NA	0.13	0.08	0.1376	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.121825	NA	NA	0.174055	0.066278	NA	0.094	NA	3.536245
1298	6	160553238	160553238	C	T	intronic	SLC22A1	NA	NA	NA	intronic	ENSG00000175003	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs45584532	0.1	0.1	0.097	0.0982428	0.1531	0.003	0.1095	0.1127	0.1125	0.15	0.0017	0.14	0.11	0.1405	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.159864	NA	NA	0.170233	0.11734	NA	0.123	NA	3.536167
1298	17	18923818	18923818	G	A	UTR3	SLC5A10	NM_001042450:c.*74G>A,NM_152351:c.*74G>A,NM_001270648:c.*74G>A,NM_001270649:c.*74G>A	NA	NA	UTR3	ENSG00000154025	ENST00000317977:c.*74G>A,ENST00000395642:c.*74G>A,ENST00000395647:c.*74G>A,ENST00000417251:c.*74G>A,ENST00000395645:c.*74G>A,ENST00000395643:c.*74G>A	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs1624825	0.38	0.38	0.326	0.285543	0.7972	0.003	0.4841	0.0333	0.2505	0.79	NA	0.57	0.04	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.402155	NA	NA	NA	NA	NA	0.348	NA	3.5361334
1298	7	5944687	5944687	C	A	intronic	CCZ1	NA	NA	NA	intronic	ENSG00000122674	NA	NA	NA	NA	NA	7p22.1	NA	NA	NA	NA	rs62453583	0.1	0.1	0.069	0.0932508	0.1451	0.0317	0.1571	0.0371	0.1339	0.13	0.03	0.18	0.06	0.1476	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.594551	1.594551	NA	0.171169	0.059677	NA	0.007	NA	3.536131
1298	1	156287403	156287403	T	C	intronic	CCT3	NA	NA	NA	intronic	ENSG00000163468	NA	NA	NA	NA	NA	1q22	NA	NA	NA	NA	rs2296374	0.44	0.44	0.386	0.455471	0.4642	0.4702	0.6427	0.2882	0.5245	0.46	0.46	0.6	0.28	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.106166	NA	NA	NA	NA	NA	0.377	NA	3.5358
1298	3	48462461	48462461	A	G	intronic	PLXNB1	NA	NA	NA	intronic	ENSG00000164050	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs11130171	0.38	0.38	0.377	0.38119	0.4642	0.3135	0.3112	0.4599	0.3088	0.45	0.29	0.33	0.42	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.112612	NA	NA	NA	NA	NA	0.464	NA	3.5358
1298	3	53260716	53260716	C	T	intronic	TKT	NA	NA	NA	intronic	ENSG00000163931	NA	NA	NA	NA	NA	3p21.1	NA	NA	NA	NA	rs2279322	0.43	0.43	0.419	0.436502	0.4642	0.6032	0.4207	0.2133	0.5491	0.46	0.59	0.4	0.22	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.932574	NA	NA	NA	NA	NA	0.457	NA	3.5358
1298	19	16025312	16025312	T	G	intronic	CYP4F11	NA	NA	NA	intronic	ENSG00000171903	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs12985248	0.36	0.36	0.312	0.292732	0.4642	0.2232	0.3775	0.2126	0.2362	0.49	0.24	0.35	0.29	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.569863	NA	NA	NA	NA	NA	0.42	NA	3.5358
1298	21	38517058	38517058	C	T	intronic	TTC3	NA	NA	NA	intronic	ENSG00000182670	NA	NA	NA	NA	NA	21q22.13	NA	NA	NA	NA	rs764175	0.57	0.57	0.547	0.593251	0.4642	0.6032	0.6282	0.6498	0.6145	0.46	0.62	0.6	0.64	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.470217	NA	NA	NA	NA	NA	0.667	NA	3.5358
1298	21	38567902	38567902	C	T	intronic	TTC3	NA	NA	NA	intronic	ENSG00000182670	NA	NA	NA	NA	NA	21q22.13	NA	NA	NA	NA	rs2835659	0.57	0.57	0.549	0.592053	0.4642	0.6032	0.6282	0.6445	0.6155	0.46	0.62	0.6	0.64	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.282063	NA	NA	NA	NA	NA	0.659	NA	3.5358
1298	21	38567911	38567911	T	C	intronic	TTC3	NA	NA	NA	intronic	ENSG00000182670	NA	NA	NA	NA	NA	21q22.13	NA	NA	NA	NA	rs7280251	0.57	0.57	0.545	0.59345	0.4642	0.6032	0.6282	0.6498	0.6155	0.46	0.62	0.6	0.64	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.410927	NA	NA	NA	NA	NA	0.659	NA	3.5358
1298	19	41765407	41765407	A	C	intronic	AXL	NA	NA	NA	intronic	ENSG00000167601	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs4591267	0.18	0.18	0.156	0.152157	0.174	0.2778	0.1326	0.1006	0.0838	0.16	0.27	0.16	0.1	0.1429	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.207106	NA	NA	0.147394	0.108765	NA	0.138	NA	3.535706
1298	1	112234084	112234084	G	T	intronic	RAP1A	NA	NA	NA	intronic	ENSG00000116473	NA	NA	NA	NA	NA	1p13.2	NA	NA	NA	NA	rs10489469	0.12	0.12	0.096	0.11861	0.1501	0.1825	0.1297	0.0053	0.1656	0.16	0.14	0.16	0.01	0.1541	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.841774	NA	NA	0.160465	0.033591	NA	0.08	NA	3.535335
1299	1	152944156	152944156	C	T	intronic	SPRR4	NA	NA	NA	intronic	ENSG00000184148	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs6671520	0.24	0.24	0.236	0.20028	0.4652	0.1161	0.2363	0.0159	0.2382	0.47	0.13	0.27	0.02	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.170378	NA	NA	NA	NA	NA	0.181	NA	3.5348
1299	1	160165451	160165451	C	T	intronic	CASQ1	NA	NA	NA	intronic	ENSG00000143318	NA	NA	NA	NA	NA	1q23.2	NA	NA	NA	NA	rs10908769	0.37	0.37	0.437	0.350639	0.4652	0.2927	0.4265	0.2383	0.3906	0.47	0.3	0.44	0.23	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.853873	NA	NA	NA	NA	NA	0.377	NA	3.5348
1299	2	71185391	71185391	A	C	intronic	ATP6V1B1	NA	NA	NA	intronic	ENSG00000116039,ENSG00000258881	NA	NA	NA	NA	NA	2p13.3	NA	NA	NA	NA	rs967063	0.45	0.45	0.43	0.465455	0.4652	0.6915	0.4971	0.205	0.5624	0.46	0.66	0.5	0.17	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.301792	NA	NA	NA	NA	NA	0.486	NA	3.5348
1299	3	133475563	133475563	G	T	intronic	TF	NA	NA	NA	intronic	ENSG00000091513	NA	NA	NA	NA	NA	3q22.1	NA	NA	NA	NA	rs4241357	0.58	0.58	0.573	0.63119	0.4652	0.7212	0.5692	0.6543	0.7219	0.46	0.73	0.53	0.64	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.534297	NA	NA	NA	NA	NA	0.471	NA	3.5348
1299	3	179439466	179439466	T	C	intronic	USP13	NA	NA	NA	intronic	ENSG00000058056	NA	NA	NA	NA	NA	3q26.33	NA	NA	NA	NA	rs2119898	0.37	0.37	0.326	0.330671	0.4652	0.4474	0.3977	0.0408	0.4162	0.46	0.46	0.45	0.07	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.300991	NA	NA	NA	NA	NA	0.304	NA	3.5348
1299	7	133984432	133984432	C	T	intronic	SLC35B4	NA	NA	NA	intronic	ENSG00000205060	NA	NA	NA	NA	NA	7q33	NA	NA	NA	NA	rs2075372	0.47	0.47	0.453	0.495407	0.4652	0.2708	0.5821	0.6044	0.5491	0.48	0.27	0.55	0.62	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.230288	NA	NA	NA	NA	NA	0.435	NA	3.5348
1299	9	123758425	123758425	T	C	intronic	C5	NA	NA	NA	intronic	ENSG00000106804	NA	NA	NA	NA	NA	9q33.2	NA	NA	NA	NA	rs10760134	0.41	0.41	0.374	0.409944	0.4652	0.5694	0.5014	0.0416	0.6217	0.48	0.58	0.5	0.05	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.259841	1.259841	NA	NA	NA	NA	0.312	NA	3.5348
1299	10	50870500	50870500	G	A	intronic	CHAT	NA	NA	NA	intronic	ENSG00000070748	NA	NA	NA	NA	NA	10q11.23	NA	NA	NA	NA	rs11101200	0.35	0.35	0.346	0.325679	0.4652	0.1012	0.3818	0.3941	0.2812	0.48	0.12	0.38	0.37	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.47054	NA	NA	NA	NA	NA	0.326	NA	3.5348
1299	12	52941894	52941894	C	T	intronic	KRT71	NA	NA	NA	intronic	ENSG00000139648	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs3803083	0.12	0.12	0.125	0.123403	0.161	0.1706	0.0562	0.0136	0.2321	0.17	0.18	0.06	0.01	0.1535	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.730411	NA	NA	0.15093	0.040626	NA	0.036	NA	3.53457
1299	3	20181676	20181676	T	C	intronic	KAT2B	NA	NA	NA	intronic	ENSG00000114166	NA	NA	NA	NA	NA	3p24.3	NA	NA	NA	NA	rs3762633	0.34	0.34	0.366	0.423522	0.1223	0.5784	0.1902	0.5961	0.5061	0.11	0.59	0.14	0.54	0.2404	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.428207	NA	NA	0.10328	0.515207	NA	0.297	NA	3.53402
1299	2	219609776	219609776	G	A	intronic	TTLL4	NA	NA	NA	intronic	ENSG00000135912	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs2272191	0.42	0.42	0.44	0.405551	0.4662	0.1409	0.4222	0.6082	0.3303	0.46	0.16	0.42	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.127902	NA	NA	NA	NA	NA	0.529	NA	3.5338
1299	10	128829	128829	A	G	intergenic	TUBB8,ZMYND11	dist=33651;dist=51576	NA	NA	ncRNA_intronic	ENSG00000232420	NA	NA	NA	NA	NA	10p15.3	NA	NA	NA	NA	rs2928100	0.44	0.44	0.413	0.434904	0.4662	0.2321	0.4841	0.6301	0.3129	0.45	0.21	0.48	0.64	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.699224	NA	NA	NA	NA	NA	0.348	NA	3.5338
1299	14	81448282	81448282	C	G	intronic	TSHR	NA	NA	NA	intronic	ENSG00000165409	NA	NA	NA	NA	NA	14q31.1	NA	NA	NA	NA	rs3783950	0.53	0.53	0.521	0.515775	0.4662	0.5982	0.5562	0.4576	0.5317	0.46	0.62	0.54	0.52	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.062487	NA	NA	NA	NA	NA	0.522	NA	3.5338
1299	16	30095236	30095236	C	T	intronic	PPP4C	NA	NA	NA	intronic	ENSG00000149923	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs11644459	0.46	0.46	0.458	0.473842	0.4662	0.3661	0.3948	0.5968	0.4826	0.46	0.36	0.43	0.59	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.375524	1.375524	NA	NA	NA	NA	0.457	NA	3.5338
1299	16	84473192	84473192	A	G	intronic	ATP2C2	NA	NA	NA	intronic	ENSG00000064270	NA	NA	NA	NA	NA	16q24.1	NA	NA	NA	NA	rs931077	0.52	0.52	0.493	0.541534	0.4662	0.6141	0.5778	0.4955	0.5808	0.47	0.59	0.55	0.47	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.022657	NA	NA	NA	NA	NA	0.522	NA	3.5338
1299	17	26075070	26075070	G	A	intergenic	LGALS9,NOS2	dist=98484;dist=8722	NA	NA	ncRNA_intronic	ENSG00000266786	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs4796018	0.57	0.57	0.576	0.578674	0.4662	0.4673	0.5735	0.8079	0.5031	0.46	0.48	0.58	0.83	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.657022	NA	NA	NA	NA	NA	0.71	NA	3.5338
1299	17	48652833	48652833	C	T	intronic	CACNA1G	NA	NA	NA	intronic	ENSG00000006283	NA	NA	NA	NA	NA	17q21.33	NA	NA	NA	NA	rs16949166	0.59	0.59	0.598	0.60603	0.4662	0.9167	0.585	0.438	0.6718	0.47	0.93	0.53	0.43	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.56653	NA	NA	NA	NA	NA	0.449	NA	3.5338
1299	20	5282619	5282619	A	T	downstream	PROKR2	NA	NA	NA	UTR3	ENSG00000101292	ENST00000546004:c.*67T>A	NA	NA	NA	NA	20p12.3	NA	NA	NA	NA	rs3746681	0.41	0.41	0.399	0.423522	0.4662	0.4296	0.3602	0.3608	0.5031	0.47	0.38	0.4	0.37	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.850601	1.850601	NA	NA	NA	ID=COSN166474;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.297	NA	3.5338
1299	4	8230070	8230070	T	C	exonic	SH3TC1	NA	synonymous SNV	SH3TC1:NM_018986:exon12:c.T2649C:p.A883A	exonic	ENSG00000125089	NA	synonymous SNV	ENSG00000125089:ENST00000245105:exon12:c.T2649C:p.A883A,ENSG00000125089:ENST00000539824:exon12:c.T2421C:p.A807A	NA	NA	4p16.1	NA	NA	NA	NA	rs1281150	0.55	0.55	0.509	0.534145	0.7177	0.5159	0.5259	0.3033	0.682	0.72	0.49	0.59	0.34	0.6551	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.107355	NA	NA	0.760126	0.373581	NA	0.696	NA	3.5337406
1299	15	91428636	91428636	G	A	intronic	FES	NA	NA	NA	exonic	ENSG00000182511	NA	nonsynonymous SNV	ENSG00000182511:ENST00000470152:exon2:c.G361A:p.V121I	NA	NA	15q26.1	NA	NA	NA	NA	rs7177338	0.59	0.59	0.57	0.587859	0.5239	0.8006	0.6369	0.4349	0.6063	0.51	0.82	0.64	0.41	0.5809	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.837595	NA	NA	0.528192	0.468352	NA	0.478	NA	3.5336747
1299	6	154542491	154542491	A	G	intronic	IPCEF1,OPRM1	NA	NA	NA	intronic	ENSG00000074706,ENSG00000112038	NA	NA	NA	NA	NA	6q25.2	NA	NA	NA	NA	rs2272381	0.19	0.19	0.193	0.197484	0.165	0.2123	0.1182	0.2262	0.2331	0.16	0.23	0.14	0.22	0.1642	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.186954	2.186954	NA	0.137209	0.21448	NA	0.181	NA	3.533591
1299	22	30891859	30891859	A	G	intronic	SEC14L4	NA	NA	NA	intronic	ENSG00000133488	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs9608944	0.16	0.16	0.144	0.161142	0.2336	0.0407	0.2853	0.1513	0.136	0.23	0.04	0.23	0.16	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.013034	NA	NA	0.232872	0.176301	NA	0.08	NA	3.533528
1299	11	117261488	117261488	C	G	intronic	CEP164	NA	NA	NA	intronic	ENSG00000110274	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs897837	0.1	0.1	0.082	0.11222	0.1392	0.0992	0.1988	0.0076	0.1779	0.13	0.1	0.18	0.01	0.163	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.141628	NA	NA	0.164688	0.038392	NA	0.065	NA	3.533112
1299	14	106235966	106235966	T	C	intergenic	ELK2AP,KIAA0125	dist=96822;dist=147872	NA	NA	intronic	ENSG00000211897	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs145579382	0.02	0.02	0.016	0.0203674	0.0497	NA	0.0317	0.0015	0.0286	0.04	NA	0.02	0.002	0.0363	0.048	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.709952	NA	NA	0.047665	0.005932	NA	0.014	NA	3.5330017
1299	1	3422144	3422144	G	C	intronic	MEGF6	NA	NA	NA	intronic	ENSG00000162591	NA	NA	NA	NA	NA	1p36.32	NA	NA	NA	NA	rs2105305	0.14	0.14	0.101	0.14976	0.1382	0.2321	0.1931	0.0651	0.1605	0.13	0.2	0.18	0.05	0.1977	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.955609	NA	NA	0.131212	0.073227	NA	0.13	NA	3.532888
1299	2	219618237	219618237	A	C	intronic	TTLL4	NA	NA	NA	intronic	ENSG00000135912	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs6436073	0.44	0.44	0.448	0.447684	0.4672	0.1409	0.428	0.7648	0.3292	0.47	0.16	0.42	0.75	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.341261	NA	NA	NA	NA	NA	0.572	NA	3.5328
1299	2	219618497	219618497	T	G	intronic	TTLL4	NA	NA	NA	intronic	ENSG00000135912	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs6757772	0.42	0.42	0.425	0.403554	0.4672	0.1409	0.4222	0.6006	0.3292	0.47	0.16	0.42	0.64	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.292519	NA	NA	NA	NA	NA	0.522	NA	3.5328
1299	3	155027416	155027416	T	C	intergenic	LOC100507537,PLCH1	dist=15927;dist=170255	NA	NA	ncRNA_exonic	ENSG00000239443	NA	NA	NA	NA	NA	3q25.31	NA	NA	NA	NA	rs9854587	0.46	0.46	0.439	0.483027	0.4672	0.5883	0.4452	0.3306	0.6237	0.46	0.58	0.43	0.34	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.186465	NA	NA	NA	NA	NA	0.232	NA	3.5328
1299	15	41814172	41814172	G	C	intronic	RPAP1	NA	NA	NA	intronic	ENSG00000103932	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs2289740	0.49	0.49	0.495	0.496805	0.4672	0.3294	0.5101	0.6717	0.454	0.48	0.32	0.5	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.140406	NA	NA	NA	NA	NA	0.543	NA	3.5328
1299	2	102785158	102785158	G	T	intronic	IL1R1	NA	NA	NA	intronic	ENSG00000115594	NA	NA	NA	NA	NA	2q12.1	NA	NA	NA	NA	rs3213735	0.32	0.32	0.219	NA	NA	NA	NA	NA	NA	0.27	0.44	0.37	0.22	0.3188	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.232271	NA	NA	0.148488	0.100772	NA	0.13	NA	3.532712
1299	15	65681801	65681801	G	A	intronic	IGDCC4	NA	NA	NA	intronic	ENSG00000103742	NA	NA	NA	NA	NA	15q22.31	NA	NA	NA	NA	rs11071841	0.23	0.23	0.209	0.192093	0.1551	0.4167	0.2176	0.1225	0.0746	0.16	0.44	0.17	0.14	0.1708	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.772423	2.772423	NA	0.141681	0.143019	NA	0.261	NA	3.532419
1299	10	99359412	99359412	C	T	intronic	HOGA1	NA	NA	NA	intronic	ENSG00000155252,ENSG00000241935,ENSG00000249967	NA	NA	NA	NA	NA	10q24.2	NA	NA	NA	NA	rs7078003	0.09	0.09	0.068	0.0908546	0.1541	0.0327	0.0663	0.0961	0.0961	0.16	0.04	0.06	0.08	0.1393	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.122336	NA	NA	0.174419	0.107354	NA	0.043	NA	3.532181
1299	3	188584186	188584186	G	A	intronic	LPP	NA	NA	NA	intronic	ENSG00000145012	NA	NA	NA	NA	NA	3q28	NA	NA	NA	NA	rs1877547	0.07	0.07	0.08	0.0611022	0.162	0.002	0.0504	0.0053	0.1012	0.17	0.0035	0.06	0.01	0.137	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.353589	NA	NA	0.168837	0.029732	NA	0.116	NA	3.532163
1299	7	149575884	149575884	T	C	intronic	ATP6V0E2	NA	NA	NA	ncRNA_UTR3	ENSG00000171130	NA	NA	NA	NA	NA	7q36.1	NA	Name=Egr-1	NA	NA	rs10246226	0.59	0.59	0.556	0.575879	0.6004	0.377	0.5303	0.8495	0.4182	0.6	0.42	0.55	0.81	0.5735	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.646676	NA	NA	0.627297	0.810561	NA	0.63	NA	3.5321363
1299	5	119016190	119016190	A	T	intergenic	FAM170A,PRR16	dist=44673;dist=783829	NA	NA	ncRNA_exonic	ENSG00000234259	NA	NA	NA	NA	NA	5q23.1	NA	NA	NA	NA	rs1972629	0.38	0.38	0.397	0.390775	0.4682	0.3532	0.415	0.3517	0.3855	0.46	0.33	0.39	0.32	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.691763	NA	NA	NA	NA	NA	0.464	NA	3.5318
1299	6	73919713	73919713	A	G	intergenic	KCNQ5,KHDC1L	dist=11140;dist=13555	NA	NA	ncRNA_exonic	ENSG00000251360	NA	NA	NA	NA	NA	6q13	NA	NA	NA	NA	rs2882402	0.42	0.42	0.402	0.397764	0.4682	0.3621	0.3963	0.5045	0.2188	0.46	0.32	0.38	0.5	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.187981	NA	NA	NA	NA	NA	0.543	NA	3.5318
1299	6	73919726	73919726	T	G	intergenic	KCNQ5,KHDC1L	dist=11153;dist=13542	NA	NA	ncRNA_exonic	ENSG00000251360	NA	NA	NA	NA	NA	6q13	NA	NA	NA	NA	rs4301273	0.42	0.42	0.416	0.397764	0.4682	0.3621	0.3963	0.5045	0.2188	0.46	0.32	0.38	0.5	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.46264	NA	NA	NA	NA	NA	0.543	NA	3.5318
1299	9	114467448	114467448	T	C	intronic	C9orf84	NA	NA	NA	intronic	ENSG00000165181	NA	NA	NA	NA	NA	9q31.3	NA	NA	NA	NA	rs4993590	NA	NA	0.102	0.43151	0.4682	0.7639	0.5836	0.1331	0.3466	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.756657	NA	NA	NA	NA	NA	NA	NA	3.5318
1299	11	118986659	118986659	C	T	intronic	C2CD2L	NA	NA	NA	intronic	ENSG00000172375	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs608793	0.44	0.44	0.43	0.412141	0.4682	0.1012	0.6297	0.6437	0.2076	0.48	0.12	0.58	0.66	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.764451	NA	NA	NA	NA	NA	0.464	NA	3.5318
1299	16	57144920	57144920	T	A	intronic	CPNE2	NA	NA	NA	intronic	ENSG00000140848	NA	NA	NA	NA	NA	16q13	NA	NA	NA	NA	rs8053682	0.51	0.51	0.564	0.614018	0.4682	0.6329	0.4078	0.8336	0.5941	0.41	0.56	0.42	0.66	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.309718	NA	NA	NA	NA	NA	NA	NA	3.5318
1299	16	57144921	57144921	G	C	intronic	CPNE2	NA	NA	NA	intronic	ENSG00000140848	NA	NA	NA	NA	NA	16q13	NA	NA	NA	NA	rs8047463	0.51	0.51	0.576	0.614018	0.4682	0.6329	0.4078	0.8336	0.5941	0.41	0.56	0.42	0.66	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.980625	NA	NA	NA	NA	NA	NA	NA	3.5318
1299	17	55754573	55754573	G	A	intronic	MSI2	NA	NA	NA	intronic	ENSG00000153944	NA	NA	NA	NA	NA	17q22	NA	NA	NA	NA	rs2286359	0.39	0.39	0.358	0.372404	0.4682	0.2917	0.4726	0.2784	0.4131	0.45	0.31	0.52	0.3	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.492433	2.492433	NA	NA	NA	NA	0.464	NA	3.5318
1299	15	25958797	25958797	G	A	intronic	ATP10A	NA	NA	NA	intronic	ENSG00000206190	NA	NA	NA	NA	NA	15q12	NA	NA	NA	NA	rs2291351	0.16	0.16	0.13	0.145767	0.1322	0.2024	0.2392	0.0461	0.1697	0.13	0.24	0.23	0.06	0.189	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.944683	NA	NA	0.147127	0.071136	NA	0.123	NA	3.531673
1299	1	19549864	19549864	T	C	intronic	EMC1	NA	NA	NA	ncRNA_intronic	ENSG00000230424	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs2073105	0.35	0.35	0.312	0.332468	0.2614	0.6835	0.2911	0.1346	0.3405	0.25	0.71	0.25	0.14	0.296	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.108514	NA	NA	0.244302	0.150931	NA	0.21	NA	3.5316313
1299	11	47431961	47431961	G	A	intronic	SLC39A13	NA	NA	NA	intronic	ENSG00000165915	NA	NA	NA	NA	NA	11p11.2	NA	NA	NA	NA	rs61000762	0.22	0.22	0.207	0.222444	0.1421	0.2956	0.1988	0.3071	0.1319	0.15	0.32	0.21	0.24	0.1889	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.509003	NA	NA	0.137506	0.263517	NA	0.167	NA	3.531494
1299	19	43439528	43439528	C	A	intronic	PSG7	NA	NA	NA	intronic	ENSG00000221878	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs10422023	0.22	0.22	0.196	0.277955	0.1272	0.4216	0.1859	0.2648	0.3681	0.13	0.37	0.13	0.23	0.2082	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.1999	NA	NA	0.133721	0.238074	NA	0.181	NA	3.530879
1299	12	96371670	96371670	G	A	intronic	HAL	NA	NA	NA	intronic	ENSG00000084110	NA	NA	NA	NA	NA	12q23.1	NA	NA	NA	NA	rs3764038	0.31	0.31	0.298	0.277556	0.2356	0.4554	0.4496	0.1452	0.1943	0.22	0.47	0.41	0.19	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.885363	NA	NA	0.233551	0.157534	NA	0.268	NA	3.530849
1299	19	41762525	41762525	A	G	intronic	AXL	NA	NA	NA	intronic	ENSG00000167601	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs2304232	0.17	0.17	0.162	0.150958	0.174	0.2778	0.1311	0.0968	0.0838	0.16	0.27	0.16	0.1	0.1418	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.795274	NA	NA	0.153372	0.113936	NA	0.138	NA	3.530828
1299	7	44571657	44571657	G	A	intronic	NPC1L1	NA	NA	NA	intronic	ENSG00000015520	NA	NA	NA	NA	NA	7p13	NA	NA	NA	NA	rs55837134	0.08	0.08	0.07	0.0660942	0.163	0.004	0.0821	0.0113	0.093	0.16	0.01	0.11	0.01	0.1349	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.781613	NA	NA	0.171279	0.049705	NA	0.043	NA	3.530821
1299	1	200965601	200965601	G	A	intronic	KIF21B	NA	NA	NA	intronic	ENSG00000116852	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs10920088	0.6	0.6	0.635	0.589457	0.4692	0.627	0.4669	0.8646	0.3896	0.46	0.65	0.47	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.591627	NA	NA	NA	NA	NA	0.594	NA	3.5308
1299	1	214478459	214478459	G	A	intronic	SMYD2	NA	NA	NA	intronic	ENSG00000143499	NA	NA	NA	NA	NA	1q32.3	NA	NA	NA	NA	rs6540819	0.54	0.54	0.558	0.576078	0.4692	0.62	0.4236	0.711	0.5665	0.46	0.58	0.42	0.73	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.061752	NA	NA	NA	NA	NA	0.572	NA	3.5308
1299	2	113953952	113953952	T	C	intronic	PSD4	NA	NA	NA	intronic	ENSG00000125637	NA	NA	NA	NA	NA	2q13	NA	NA	NA	NA	rs4848318	0.46	0.46	0.403	0.441494	0.4692	0.6508	0.5288	0.1838	0.4836	0.47	0.63	0.49	0.2	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.220932	NA	NA	NA	NA	NA	0.413	NA	3.5308
1299	4	47589299	47589299	C	A	intronic	ATP10D	NA	NA	NA	intronic	ENSG00000145246	NA	NA	NA	NA	NA	4p12	NA	NA	NA	NA	rs2351790	0.61	0.61	0.612	0.558307	0.4692	0.6151	0.5706	0.7587	0.3119	0.48	0.65	0.59	0.78	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.220233	NA	NA	NA	NA	NA	0.63	NA	3.5308
1299	17	909998	909998	G	A	intronic	ABR	NA	NA	NA	intronic	ENSG00000159842	NA	NA	NA	NA	NA	17p13.3	NA	NA	NA	NA	rs2241930	0.35	0.35	0.242	0.33147	0.4692	0.1974	0.4539	0.2708	0.3231	0.44	0.2	0.46	0.29	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.334795	NA	NA	NA	NA	NA	NA	NA	3.5308
1299	19	2194657	2194657	C	T	intronic	DOT1L	NA	NA	NA	intronic	ENSG00000104885	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs4807212	0.36	0.36	NA	0.326677	0.4692	0.3224	0.3674	0.1838	0.3487	0.46	0.37	0.4	0.17	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.650548	NA	NA	NA	NA	NA	0.355	NA	3.5308
1299	19	3193180	3193180	C	G	intronic	NCLN	NA	NA	NA	intronic	ENSG00000125912	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs538197	0.46	0.46	0.402	0.489816	0.4692	0.6379	0.5245	0.3064	0.5818	0.44	0.59	0.5	0.3	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.31966	NA	NA	NA	NA	NA	0.341	NA	3.5308
1299	16	28914026	28914026	G	A	intronic	ATP2A1	NA	NA	NA	intronic	ENSG00000196296	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs41292394	0.08	0.08	0.072	0.0640974	0.17	0.003	0.1153	0.0106	0.0542	0.15	0.0035	0.16	0.01	0.1211	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.859373	NA	NA	0.17814	0.033227	NA	0.116	NA	3.53076
1299	X	100265552	100265552	T	A	UTR3	TRMT2B	NM_024917:c.*18A>T,NM_001167971:c.*18A>T,NM_001167970:c.*18A>T,NM_001167972:c.*18A>T	NA	NA	UTR3	ENSG00000188917	ENST00000545398:c.*18A>T,ENST00000338687:c.*18A>T,ENST00000490509:c.*161A>T,ENST00000372939:c.*18A>T,ENST00000372936:c.*18A>T,ENST00000372935:c.*18A>T	NA	NA	NA	NA	Xq22.1	NA	NA	NA	NA	rs5921705	0.37	0.37	0.39905	NA	NA	NA	NA	NA	NA	0.4	0.05	0.27	0.76	0.3877	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.997858	2.997858	NA	0.414957	0.760104	NA	0.326	NA	3.5306764
1299	6	151152656	151152656	T	C	exonic	PLEKHG1	NA	synonymous SNV	PLEKHG1:NM_001029884:exon16:c.T2409C:p.T803T	exonic	ENSG00000120278	NA	synonymous SNV	ENSG00000120278:ENST00000358517:exon15:c.T2409C:p.T803T,ENSG00000120278:ENST00000367328:exon16:c.T2409C:p.T803T	NA	NA	6q25.1	NA	NA	NA	NA	rs803411	0.67	0.67	0.632	0.63738	0.7107	0.5397	0.7205	0.6112	0.6391	0.72	0.58	0.75	0.65	0.7063	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.539312	NA	NA	0.71907	0.647072	NA	0.667	NA	3.5305966
1299	15	100594299	100594299	G	C	intronic	ADAMTS17	NA	NA	NA	intronic	ENSG00000140470	NA	NA	NA	NA	NA	15q26.3	NA	NA	NA	NA	rs28587358	0.32	0.32	NA	0.307708	0.2018	0.4435	0.3112	0.3313	0.2423	0.2	0.47	0.31	0.36	0.2677	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.916969	NA	NA	NA	NA	NA	0.268	NA	3.5305
1299	9	34107310	34107310	G	A	intronic	DCAF12	NA	NA	NA	intronic	ENSG00000198876	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs10511915	0.11	0.11	0.092	0.133187	0.1431	0.0675	0.1326	0.0469	0.3078	0.15	0.09	0.15	0.03	0.1585	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.124022	NA	NA	0.168256	0.068543	NA	0.116	NA	3.530144
1299	3	10077955	10077955	A	G	intronic	FANCD2	NA	NA	NA	intronic	ENSG00000144554	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs17032278	0.18	0.18	0.191	0.182109	0.1392	0.0486	0.1614	0.3623	0.135	0.15	0.07	0.18	0.38	0.1662	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.992148	NA	NA	0.164457	0.323877	NA	0.348	NA	3.530143
1299	7	45743128	45743128	T	G	intronic	ADCY1	NA	NA	NA	intronic	ENSG00000164742	NA	NA	NA	NA	NA	7p12.3	NA	Name=c-Myc	NA	NA	rs2247685	0.43	0.43	0.41	0.45008	0.4891	0.4206	0.4856	0.2474	0.6892	0.5	0.42	0.49	0.29	0.4933	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.245427	NA	NA	0.487558	0.270767	NA	0.428	NA	3.530042
1299	1	210857457	210857457	A	G	exonic	KCNH1	NA	synonymous SNV	KCNH1:NM_002238:exon11:c.T2055C:p.D685D,KCNH1:NM_172362:exon11:c.T2136C:p.D712D	exonic	ENSG00000143473	NA	synonymous SNV	ENSG00000143473:ENST00000271751:exon11:c.T2136C:p.D712D,ENSG00000143473:ENST00000367007:exon11:c.T2055C:p.D685D	NA	NA	1q32.2	NA	NA	NA	NA	rs1135317	0.7	0.7	0.713	0.739417	0.7117	0.6528	0.6888	0.8071	0.8016	0.71	0.65	0.66	0.78	0.7114	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.314242	NA	NA	0.713654	0.795506	NA	0.601	NA	3.5299126
1299	3	111658514	111658514	A	G	intronic	PHLDB2	NA	NA	NA	intronic	ENSG00000144824	NA	NA	NA	NA	NA	3q13.2	NA	NA	NA	NA	rs2272289	0.1	0.1	0.088	0.0908546	0.1521	0.0069	0.0922	0.1195	0.0746	0.15	0.01	0.12	0.09	0.1423	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.064829	NA	NA	0.175698	0.140036	NA	0.174	NA	3.529902
1299	2	74482892	74482892	T	C	intronic	SLC4A5	NA	NA	NA	intronic	ENSG00000188687,ENSG00000264324	NA	NA	NA	NA	NA	2p13.1	NA	NA	NA	NA	rs7602215	0.23	0.23	0.238	0.2502	0.1431	0.3393	0.1383	0.3366	0.2311	0.12	0.35	0.15	0.33	0.176	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.100127	NA	NA	0.151047	0.312528	NA	0.333	NA	3.529853
1299	1	145296268	145296268	C	T	intronic	NBPF10,NBPF9	NA	NA	NA	intronic	ENSG00000163386,ENSG00000255168	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs4996271	NA	NA	NA	0.332867	0.4702	0.4107	0.4323	0.0673	0.3998	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.765436	NA	NA	NA	NA	NA	NA	NA	3.5298
1299	2	133539460	133539460	A	T	intronic	NCKAP5	NA	NA	NA	intronic	ENSG00000176771	NA	NA	NA	NA	NA	2q21.2	NA	NA	NA	NA	rs6717116	0.56	0.56	0.542	0.536741	0.4702	0.745	0.4813	0.4985	0.4816	0.47	0.78	0.48	0.49	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.561558	NA	NA	NA	NA	NA	0.638	NA	3.5298
1299	6	151199071	151199071	A	G	intronic	MTHFD1L	NA	NA	NA	intronic	ENSG00000120254	NA	NA	NA	NA	NA	6q25.1	NA	NA	NA	NA	rs2073063	0.5	0.5	0.464	0.498003	0.4702	0.4464	0.5259	0.5923	0.4325	0.46	0.45	0.53	0.59	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.959976	NA	NA	NA	NA	NA	0.522	NA	3.5298
1299	19	50315698	50315698	A	C	intronic	FUZ	NA	NA	NA	intronic	ENSG00000010361	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs2305919	0.45	0.45	0.44	0.494609	0.4702	0.4087	0.4049	0.5204	0.637	0.46	0.39	0.42	0.5	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.234701	NA	NA	NA	NA	ID=COSN165876;OCCURENCE=1(breast),1(endometrium)	0.341	NA	3.5298
1299	20	45797954	45797954	T	A	intronic	EYA2	NA	NA	NA	intronic	ENSG00000064655	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs3091593	0.43	0.43	0.369	0.438698	0.4702	0.5109	0.5908	0.1982	0.5491	0.45	0.52	0.54	0.19	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.009646	NA	NA	NA	NA	NA	0.341	NA	3.5298
1299	21	31914000	31914000	T	A	exonic	KRTAP19-6	NA	synonymous SNV	KRTAP19-6:NM_181612:exon1:c.A153T:p.G51G	exonic	ENSG00000186925	NA	synonymous SNV	ENSG00000186925:ENST00000334046:exon1:c.A153T:p.G51G	NA	NA	21q22.11	NA	NA	NA	NA	rs1023364	0.73	0.73	0.73	0.747804	0.7117	0.7024	0.7277	0.8033	0.771	0.7	0.71	0.72	0.79	0.7156	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.136985	NA	NA	0.709651	0.782569	NA	0.79	NA	3.5297156
1299	14	106091555	106091555	C	T	intergenic	TMEM121,ELK2AP	dist=95016;dist=44359	NA	NA	exonic	ENSG00000211892	NA	synonymous SNV	ENSG00000211892:ENST00000390543:exon3:c.G339A:p.E113E	NA	NA	14q32.33	NA	NA	NA	NA	rs35035896	0.34	0.34	0.312	0.360423	0.3151	0.5992	0.2421	0.3253	0.2924	0.31	0.46	0.28	0.28	0.3323	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.974181	NA	NA	0.323024	0.26927	NA	0.261	NA	3.529576
1299	3	173322248	173322248	T	C	UTR5	NLGN1	NM_014932:c.-141T>C	NA	NA	UTR5	ENSG00000169760	ENST00000423427:c.-141T>C,ENST00000413821:c.-141T>C,ENST00000457714:c.-141T>C,ENST00000361589:c.-141T>C,ENST00000415045:c.-141T>C	NA	NA	NA	NA	3q26.31	NA	NA	NA	NA	rs3844523	0.77	0.77	0.76	0.747005	0.8042	0.7887	0.7262	0.6861	0.7423	0.82	0.79	0.77	0.69	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.759271	NA	NA	NA	NA	NA	0.717	NA	3.5291334
1299	16	23221238	23221238	A	G	intronic	SCNN1G	NA	NA	NA	ncRNA_intronic	ENSG00000260741	NA	NA	NA	NA	NA	16p12.2	NA	NA	NA	NA	rs4281710	0.81	0.81	0.775	0.783946	0.8042	0.873	0.8732	0.6135	0.8384	0.8	0.91	0.87	0.67	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.50806	1.50806	NA	NA	NA	NA	0.79	NA	3.5291333
1299	4	89649659	89649659	A	G	ncRNA_exonic	FAM13A-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000248019	NA	NA	NA	NA	NA	4q22.1	NA	NA	NA	NA	rs9224	0.6	0.6	0.58	0.634984	0.3439	0.8274	0.5072	0.7708	0.6431	0.35	0.86	0.44	0.78	0.4599	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.390372	NA	NA	0.333837	0.714026	NA	0.536	NA	3.5290296
1299	17	40836975	40836975	A	G	intronic	CNTNAP1	NA	NA	NA	ncRNA_intronic	ENSG00000267765	NA	NA	NA	NA	NA	17q21.2	NA	Name=Egr-1	NA	NA	rs9889373	0.61	0.61	0.612	0.670527	0.5785	0.4653	0.5591	0.9319	0.7025	0.58	0.46	0.53	0.9	0.6245	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.515455	NA	NA	0.601512	0.88039	NA	0.775	NA	3.5288213
1299	1	240492543	240492543	G	A	intronic	FMN2	NA	NA	NA	intronic	ENSG00000155816	NA	NA	NA	NA	NA	1q43	NA	NA	NA	NA	rs6686353	0.61	0.61	0.625	0.623602	0.4712	0.5	0.6427	0.9206	0.4928	0.48	0.53	0.64	0.88	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.699815	NA	NA	NA	NA	NA	0.594	NA	3.5288
1299	2	86360225	86360225	A	G	intronic	PTCD3	NA	NA	NA	intronic	ENSG00000132300	NA	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs2241438	0.28	0.28	0.263	0.257788	0.4712	0.1478	0.3646	0.0575	0.3466	0.46	0.16	0.39	0.07	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.280339	NA	NA	NA	NA	NA	0.333	NA	3.5288
1299	3	37058509	37058509	A	G	intronic	MLH1	NA	NA	NA	intronic	ENSG00000076242	NA	NA	NA	NA	NA	3p22.2	NA	NA	NA	NA	rs4647277	0.37	0.37	0.356	0.341653	0.4712	0.0754	0.4078	0.5	0.2219	0.48	0.09	0.46	0.47	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.602605	NA	NA	NA	NA	NA	0.493	NA	3.5288
1299	6	159197371	159197371	T	C	intronic	EZR	NA	NA	NA	intronic	ENSG00000092820	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs9346767	0.33	0.33	0.317	0.33147	0.4712	0.1935	0.2608	0.2837	0.4448	0.48	0.16	0.32	0.29	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.497853	NA	NA	NA	NA	NA	0.312	NA	3.5288
1299	18	8546782	8546782	A	G	intergenic	PTPRM,RAB12	dist=139923;dist=62661	NA	NA	ncRNA_exonic	ENSG00000225212	NA	NA	NA	NA	NA	18p11.22	NA	NA	NA	NA	rs16953712	0.52	0.52	0.536	0.564696	0.4712	0.4464	0.428	0.7897	0.5757	0.47	0.42	0.47	0.77	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.272007	NA	NA	NA	NA	NA	0.507	NA	3.5288
1299	19	11224491	11224491	A	G	intronic	LDLR	NA	NA	NA	intronic	ENSG00000130164	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs1569372	0.35	0.35	0.299	0.355431	0.4712	0.2014	0.4986	0.2882	0.3845	0.47	0.18	0.47	0.29	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.656548	NA	NA	NA	NA	NA	0.399	NA	3.5288
1299	3	73024350	73024350	C	A	UTR3	GXYLT2	NM_001080393:c.*40C>A	NA	NA	UTR3	ENSG00000172986	ENST00000389617:c.*40C>A	NA	NA	NA	NA	3p13	NA	NA	Name=10	NA	rs1052278	0.56	0.56	0.529	0.554712	0.5905	0.5268	0.67	0.5363	0.4898	0.58	0.52	0.64	0.51	0.5988	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.326334	2.326334	NA	0.615282	0.572225	NA	0.406	NA	3.5287514
1299	9	27217810	27217810	C	T	intronic	TEK	NA	NA	NA	intronic	ENSG00000120156	NA	NA	NA	NA	NA	9p21.2	NA	NA	NA	NA	rs2275083	0.28	0.28	0.288	0.315495	0.2117	0.1855	0.232	0.6188	0.2055	0.23	0.18	0.21	0.53	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.541423	NA	NA	0.259585	0.586705	NA	0.326	NA	3.528715
1299	12	6669257	6669257	T	C	intronic	NOP2	NA	NA	NA	intronic	ENSG00000111641	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs11064255	0.19	0.19	0.203	0.230232	0.1372	0.0188	0.1009	0.5635	0.1851	0.13	0.01	0.11	0.55	0.1693	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.299457	NA	NA	0.165052	0.470153	NA	0.196	NA	3.528448
1299	19	33444511	33444511	T	C	intronic	CEP89	NA	NA	NA	intronic	ENSG00000121289	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs80283382	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.4717	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.021734	NA	NA	NA	NA	NA	NA	NA	3.5283
1299	19	13418707	13418707	C	T	intronic	CACNA1A	NA	NA	NA	intronic	ENSG00000141837	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs16015	0.1	0.1	0.088	0.0994409	0.165	0.0625	0.098	0.0431	0.1472	0.16	0.05	0.1	0.05	0.1438	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.223785	NA	NA	0.162983	0.055091	NA	0.13	NA	3.528217
1299	11	47857168	47857168	A	G	intronic	NUP160	NA	NA	NA	intronic	ENSG00000030066	NA	NA	NA	NA	NA	11p11.2	NA	NA	NA	NA	rs2305982	0.22	0.22	0.196	0.21246	0.1431	0.2976	0.1988	0.2678	0.1309	0.15	0.33	0.2	0.22	0.1918	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.082274	NA	NA	0.136924	0.251931	NA	0.159	NA	3.528176
1299	8	16935234	16935234	G	C	intronic	MICU3	NA	NA	NA	intronic	ENSG00000155970	NA	NA	NA	NA	NA	8p22	NA	NA	NA	NA	rs10098337	0.39	0.39	0.377	0.363219	0.2406	0.4742	0.3617	0.4841	0.2127	0.24	0.49	0.35	0.53	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.184137	NA	NA	0.231278	0.403902	NA	0.261	NA	3.528122
1299	2	61009909	61009909	C	T	intronic	PAPOLG	NA	NA	NA	intronic	ENSG00000115421	NA	NA	NA	Score=624;Name=lod=458	NA	2p16.1	NA	NA	NA	NA	rs10197672	0.46	0.46	0.464	0.435104	0.5368	0.1468	0.4164	0.68	0.3098	0.52	0.16	0.5	0.68	0.445	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.641646	1.641646	NA	0.490109	0.64941	NA	0.572	NA	3.528091
1299	2	10133284	10133284	C	T	intronic	GRHL1	NA	NA	NA	intronic	ENSG00000134317	NA	NA	NA	NA	NA	2p25.1	NA	NA	NA	NA	rs12618788	0.22	0.22	0.186	0.202476	0.1501	0.2629	0.3487	0.2027	0.09	0.15	0.25	0.34	0.21	0.1886	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.414086	NA	NA	0.133488	0.196777	NA	0.181	NA	3.527812
1299	1	215260152	215260152	A	T	intronic	KCNK2	NA	NA	NA	intronic	ENSG00000082482	NA	NA	NA	NA	NA	1q41	NA	NA	NA	NA	rs11586565	0.4	0.4	0.352	0.29972	0.4722	0.5079	0.4841	0.0227	0.1513	0.51	0.54	0.45	0.04	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.350669	NA	NA	NA	NA	NA	0.254	NA	3.5278
1299	6	101037718	101037718	T	A	intronic	ASCC3	NA	NA	NA	intronic	ENSG00000112249	NA	NA	NA	NA	NA	6q16.3	NA	NA	NA	NA	rs1006398	0.45	0.45	0.422	0.394968	0.4722	0.5238	0.4957	0.2784	0.2689	0.49	0.58	0.46	0.24	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.579558	NA	NA	NA	NA	NA	0.406	NA	3.5278
1299	9	27202727	27202727	T	C	intronic	TEK	NA	NA	NA	intronic	ENSG00000120156	NA	NA	NA	NA	NA	9p21.2	NA	NA	NA	NA	rs550721	0.4	0.4	0.016	0.409744	0.4722	0.3958	0.5086	0.3313	0.3957	0.46	0.38	0.47	0.27	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.314854	NA	NA	NA	NA	NA	NA	NA	3.5278
1299	9	117168551	117168551	C	A	intronic	DFNB31	NA	NA	NA	intronic	ENSG00000095397	NA	NA	NA	NA	NA	9q32	NA	NA	NA	NA	rs10982200	0.42	0.42	0.394	0.404752	0.4722	0.4722	0.4899	0.1899	0.4959	0.47	0.49	0.51	0.19	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.601674	NA	NA	NA	NA	NA	0.435	NA	3.5278
1299	10	121196062	121196062	C	T	intronic	GRK5	NA	NA	NA	intronic	ENSG00000198873	NA	NA	NA	NA	NA	10q26.11	NA	NA	NA	NA	rs2275040	0.3	0.3	0.253	0.295927	0.4722	0.1647	0.4078	0.1483	0.3701	0.47	0.16	0.41	0.14	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.18332	NA	NA	NA	NA	NA	0.391	NA	3.5278
1299	10	121199365	121199365	T	C	intronic	GRK5	NA	NA	NA	intronic	ENSG00000198873	NA	NA	NA	NA	NA	10q26.11	NA	NA	NA	NA	rs1109489	0.33	0.33	0.268	0.325679	0.4722	0.1657	0.4179	0.2549	0.3701	0.47	0.16	0.42	0.24	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.707659	NA	NA	NA	NA	NA	0.428	NA	3.5278
1299	17	45095015	45095015	G	T	intergenic	RPRML,CDC27	dist=38401;dist=100296	NA	NA	ncRNA_exonic	ENSG00000263142	NA	NA	NA	NA	NA	17q21.32	NA	NA	NA	NA	rs3890957	NA	NA	0.152	0.386981	0.4722	0.3026	0.4524	0.3011	0.456	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.259336	NA	NA	NA	NA	NA	NA	NA	3.5278
1299	20	31828265	31828265	A	G	intronic	BPIFA1	NA	NA	NA	intronic	ENSG00000198183	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs6059187	0.53	0.53	0.534	0.541134	0.4722	0.3909	0.5245	0.8548	0.3548	0.47	0.36	0.52	0.85	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.151774	NA	NA	NA	NA	NA	0.514	NA	3.5278
1299	10	124159835	124159835	A	G	intronic	PLEKHA1	NA	NA	NA	intronic	ENSG00000107679	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs9988734	0.13	0.13	0.141	0.125399	0.1561	0.0565	0.1167	0.1498	0.138	0.17	0.07	0.13	0.17	0.1432	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.069055	NA	NA	0.172907	0.145483	NA	0.196	NA	3.527793
1299	14	23881920	23881920	G	T	downstream	MYH7	NA	NA	NA	downstream	ENSG00000092054	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs12147570	0.08	0.08	0.08	0.0686901	0.1392	0.001	0.0706	0.0946	0.0297	0.13	0.0017	0.09	0.1	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.14219	3.14219	NA	NA	NA	NA	0.167	NA	3.5274666
1299	3	53215799	53215799	G	A	intronic	PRKCD	NA	NA	NA	intronic	ENSG00000163932	NA	NA	NA	NA	NA	3p21.1	NA	NA	NA	NA	rs7630325	0.16	0.16	0.147	0.160743	0.161	0.2242	0.2176	0.1082	0.1258	0.17	0.19	0.21	0.08	0.1635	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.363121	NA	0.04	0.148256	0.099864	NA	0.109	NA	3.527244
1299	6	41704772	41704772	C	G	intronic	PGC	NA	NA	NA	intronic	ENSG00000096088	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs73733015	0.2	0.2	0.194	0.191494	0.1292	0.251	0.2738	0.1982	0.1268	0.13	0.25	0.23	0.23	0.1907	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.858023	4.858023	NA	0.152907	0.189287	NA	0.123	NA	3.527193
1299	5	160047265	160047265	C	G	intronic	ATP10B	NA	NA	NA	ncRNA_intronic	ENSG00000253687	NA	NA	NA	NA	NA	5q34	NA	NA	NA	NA	rs6862674	0.78	0.78	0.797	0.766773	0.8062	0.8234	0.696	0.7141	0.7894	0.81	0.81	0.74	0.72	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.318904	NA	NA	NA	NA	NA	0.775	NA	3.5271333
1299	7	24746022	24746022	A	G	intronic	DFNA5	NA	NA	NA	intronic	ENSG00000105928	NA	NA	NA	NA	NA	7p15.3	NA	NA	NA	NA	rs2269812	0.15	0.15	0.121	0.165335	0.1392	0.2004	0.2579	0.0809	0.2045	0.14	0.18	0.25	0.07	0.1945	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.254	NA	NA	0.139167	0.090227	NA	0.094	NA	3.527133
1299	11	124134743	124134743	G	A	exonic	OR8G5	NA	synonymous SNV	OR8G5:NM_001005198:exon1:c.G21A:p.G7G	ncRNA_intronic	ENSG00000197849	NA	NA	NA	NA	NA	11q24.2	NA	NA	NA	NA	rs2466637	0.5	0.5	0.468	0.438299	0.5527	0.5823	0.5591	0.292	0.2843	0.54	0.59	0.54	0.3	0.5407	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.936424	NA	NA	0.546224	0.338816	NA	0.304	NA	3.5270426
1299	7	111958382	111958382	G	A	intronic	ZNF277	NA	NA	NA	intronic	ENSG00000198839	NA	NA	NA	NA	NA	7q31.1	NA	NA	NA	NA	rs4727766	0.4	0.4	0.414	0.439497	0.2286	0.2917	0.3876	0.8041	0.3528	0.24	0.26	0.41	0.81	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.519159	NA	NA	0.244493	0.723266	NA	0.478	NA	3.526907
1299	3	49813169	49813169	C	A	intronic	IP6K1	NA	NA	NA	intronic	ENSG00000176095	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs57648519	0.39	0.39	0.396	0.414537	0.4732	0.1696	0.3559	0.6271	0.3609	0.46	0.18	0.34	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.336187	NA	NA	NA	NA	NA	0.362	NA	3.5268
1299	3	49881134	49881134	A	T	intronic	TRAIP	NA	NA	NA	intronic	ENSG00000183763	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs2246832	0.41	0.41	0.434	0.413339	0.4732	0.1657	0.3588	0.6717	0.2965	0.46	0.17	0.34	0.64	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.48997	NA	NA	NA	NA	NA	0.37	NA	3.5268
1299	4	79420787	79420787	C	T	intronic	FRAS1	NA	NA	NA	intronic	ENSG00000138759	NA	NA	NA	NA	NA	4q21.21	NA	NA	NA	NA	rs4975134	0.57	0.57	0.594	0.582069	0.4732	0.6806	0.4366	0.6218	0.6421	0.48	0.71	0.44	0.63	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.046688	NA	NA	NA	NA	NA	0.572	NA	3.5268
1299	5	115358282	115358282	A	G	intronic	AQPEP	NA	NA	NA	intronic	ENSG00000172901,ENSG00000268714	NA	NA	NA	NA	NA	5q23.1	NA	NA	NA	NA	rs13182375	0.47	0.47	0.497	0.446486	0.4732	0.37	0.3329	0.5741	0.4059	0.49	0.41	0.37	0.57	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.852437	NA	NA	NA	NA	NA	0.37	NA	3.5268
1299	7	97874143	97874143	C	A	intronic	TECPR1	NA	NA	NA	intronic	ENSG00000205356	NA	NA	NA	NA	NA	7q21.3	NA	NA	NA	NA	rs3816944	0.32	0.32	0.331	0.252796	0.4732	0.2579	0.3458	0.1029	0.1575	0.47	0.23	0.37	0.14	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.34072	NA	NA	NA	NA	NA	0.21	NA	3.5268
1299	7	157370645	157370645	G	A	intronic	PTPRN2	NA	NA	NA	intronic	ENSG00000155093	NA	NA	NA	NA	NA	7q36.3	NA	NA	NA	NA	rs736940	0.31	0.31	0.323	0.289537	0.4732	0.0099	0.2867	0.3918	0.2526	0.46	0.01	0.32	0.42	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.919877	NA	NA	NA	NA	NA	0.471	NA	3.5268
1299	10	116596071	116596071	A	C	intronic	FAM160B1	NA	NA	NA	intronic	ENSG00000151553	NA	NA	NA	NA	NA	10q25.3	NA	NA	NA	NA	rs17095662	0.38	0.38	0.369	0.388778	0.4732	0.2351	0.3588	0.3911	0.4785	0.48	0.27	0.39	0.37	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.312648	1.312648	NA	NA	NA	NA	0.522	NA	3.5268
1299	14	37153163	37153163	A	G	intronic	SLC25A21	NA	NA	NA	intronic	ENSG00000183032	NA	NA	NA	NA	NA	14q13.3	NA	NA	NA	NA	rs1884217	0.6	0.6	0.557	0.628195	0.4732	0.7996	0.6643	0.5877	0.6401	0.46	0.83	0.65	0.53	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.294299	NA	NA	NA	NA	NA	0.58	NA	3.5268
1299	19	53158992	53158992	C	G	intronic	ZNF83	NA	NA	NA	intronic	ENSG00000167766	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs3745106	0.59	0.59	0.575	0.582668	0.4732	0.7044	0.6441	0.6377	0.4519	0.48	0.72	0.57	0.63	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.482373	NA	NA	NA	NA	NA	0.493	NA	3.5268
1299	19	55776823	55776823	G	A	intronic	HSPBP1	NA	NA	NA	intronic	ENSG00000133265	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs67351527	0.32	0.32	0.322	0.3123	0.4732	0.0923	0.3646	0.3011	0.3517	0.45	0.07	0.4	0.33	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.6333	NA	NA	NA	NA	NA	0.37	NA	3.5268
1299	22	31844373	31844373	A	C	intronic	EIF4ENIF1	NA	NA	NA	intronic	ENSG00000184708,ENSG00000185721	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs2012451	0.33	0.33	0.326	0.341454	0.4732	0.0813	0.3184	0.41	0.3978	0.46	0.09	0.37	0.4	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.723364	NA	NA	NA	NA	NA	0.341	NA	3.5268
1299	17	42937749	42937749	C	G	intronic	EFTUD2	NA	NA	NA	intronic	ENSG00000108883	NA	NA	NA	NA	NA	17q21.31	NA	NA	NA	NA	rs9903106	0.11	0.11	0.108	0.105431	0.167	0.005	0.1081	0.1021	0.1483	0.16	0.0035	0.14	0.11	0.1377	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.584688	NA	NA	0.168605	0.095552	NA	0.101	NA	3.526695
1299	1	10218377	10218377	A	G	intronic	UBE4B	NA	NA	NA	intronic	ENSG00000130939	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs2273298	0.34	0.34	0.345	0.365016	0.1392	0.2956	0.1873	0.8003	0.2065	0.14	0.29	0.2	0.79	0.2033	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.869969	1.869969	NA	0.130814	0.663187	ID=COSN162924;OCCURENCE=1(breast)	0.355	NA	3.526686
1299	13	52345637	52345637	G	C	intronic	DHRS12	NA	NA	NA	intronic	ENSG00000102796	NA	NA	NA	NA	NA	13q14.3	NA	NA	NA	NA	rs2296028	0.12	0.12	0.109	0.139776	0.16	0.2073	0.0965	0.0045	0.2628	0.17	0.17	0.1	0.01	0.1501	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.217736	NA	NA	0.163256	0.033591	NA	0.08	NA	3.526644
1299	6	125598200	125598200	G	A	intronic	HDDC2	NA	NA	NA	intronic	ENSG00000111906	NA	NA	NA	NA	NA	6q22.31	NA	NA	NA	NA	rs2243391	0.15	0.15	0.21	0.171526	0.161	0.1071	0.1758	0.2965	0.0767	0.12	0.09	0.17	0.27	0.1522	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.223726	NA	NA	0.16035	0.283697	ID=COSN167885;OCCURENCE=1(large_intestine)	NA	NA	3.52645
1299	14	100803655	100803655	C	A	intronic	WARS	NA	NA	NA	ncRNA_intronic	ENSG00000258666	NA	NA	NA	NA	NA	14q32.2	NA	NA	NA	NA	rs2234528	0.79	0.79	0.761	0.777756	0.8072	0.87	0.8631	0.6051	0.8252	0.81	0.87	0.86	0.61	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.915365	NA	NA	NA	NA	NA	0.717	NA	3.5261333
1299	1	55517861	55517861	C	G	intronic	PCSK9	NA	NA	NA	intronic	ENSG00000169174	NA	NA	NA	NA	NA	1p32.3	NA	NA	NA	NA	rs613855	0.52	0.52	0.481	0.488818	0.4742	0.7956	0.6787	0.171	0.4826	0.46	0.79	0.63	0.19	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.254342	NA	NA	NA	NA	NA	0.312	NA	3.5258
1299	5	36136675	36136675	C	T	intronic	LMBRD2	NA	NA	NA	intronic	ENSG00000164187	NA	NA	NA	NA	NA	5p13.2	NA	NA	NA	NA	rs267758	0.46	0.46	0.474	0.454073	0.4742	0.3542	0.4006	0.6498	0.3098	0.47	0.32	0.39	0.64	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.050177	NA	NA	NA	NA	NA	0.341	NA	3.5258
1299	6	27236048	27236048	T	G	intergenic	PRSS16,POM121L2	dist=11649;dist=40794	NA	NA	ncRNA_exonic	ENSG00000270935	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs3800314	0.49	0.49	0.539	0.501597	0.4742	0.2649	0.4135	0.8464	0.3701	0.46	0.26	0.43	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.837215	NA	NA	NA	NA	NA	0.565	NA	3.5258
1299	6	137477823	137477823	C	T	intronic	IL22RA2	NA	NA	NA	intronic	ENSG00000164485	NA	NA	NA	NA	NA	6q23.3	NA	NA	NA	NA	rs2064501	0.63	0.63	0.65	0.675919	0.4742	0.7222	0.487	0.91	0.6534	0.47	0.7	0.48	0.91	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.633371	NA	NA	NA	NA	NA	0.623	NA	3.5258
1299	7	100607903	100607903	G	A	intergenic	ACHE,MUC12	dist=114362;dist=5001	NA	NA	ncRNA_exonic	ENSG00000225946	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs6961167	NA	NA	0.394	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4742	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.520165	NA	NA	NA	NA	NA	0.232	NA	3.5258
1299	22	17586631	17586631	G	A	intronic	IL17RA	NA	NA	NA	intronic	ENSG00000177663	NA	NA	NA	NA	NA	22q11.1	NA	NA	NA	NA	rs4819959	0.56	0.56	0.55	0.55631	0.4742	0.7907	0.4942	0.4523	0.5838	0.48	0.8	0.46	0.49	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00776	NA	NA	NA	NA	NA	0.471	NA	3.5258
1299	22	42397042	42397042	G	T	intronic	WBP2NL	NA	NA	NA	intronic	ENSG00000183066	NA	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs5758537	0.51	0.51	0.5	0.485623	0.4742	0.8641	0.3473	0.2526	0.5204	0.48	0.85	0.34	0.28	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.05647	NA	NA	NA	NA	NA	0.304	NA	3.5258
1299	3	129810234	129810234	C	T	intronic	ALG1L2	NA	NA	NA	ncRNA_intronic	ENSG00000248243,ENSG00000251287	NA	NA	NA	NA	NA	3q22.1	NA	NA	NA	NA	rs12495049	0.3	0.3	0.228	0.297923	0.4145	0.256	0.3818	0.1611	0.3466	0.4	0.22	0.4	0.15	0.3933	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.71145	NA	NA	NA	NA	NA	0.377	NA	3.5255333
1299	12	133304604	133304604	C	T	intronic	ANKLE2	NA	NA	NA	intronic	ENSG00000176915	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs11147024	0.31	0.31	0.306	0.294529	0.1382	0.494	0.3963	0.3086	0.1585	0.15	0.5	0.37	0.31	0.2218	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.231447	NA	NA	0.114616	0.290873	NA	0.275	NA	3.525384
1299	17	4926882	4926882	A	G	exonic	KIF1C	NA	synonymous SNV	KIF1C:NM_006612:exon23:c.A2748G:p.P916P	exonic	ENSG00000129250	NA	synonymous SNV	ENSG00000129250:ENST00000320785:exon23:c.A2748G:p.P916P	NA	NA	17p13.2	NA	NA	NA	NA	rs346828	0.67	0.67	0.642	0.67512	0.7107	0.6627	0.7392	0.5204	0.8149	0.71	0.66	0.76	0.56	0.7143	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.211401	NA	NA	0.716434	0.562756	ID=COSM1162595;OCCURENCE=1(pancreas)	0.638	NA	3.5252326
1299	1	1918535	1918535	A	T	intronic	KIAA1751	NA	NA	NA	downstream	ENSG00000142609	NA	NA	NA	NA	NA	1p36.33	NA	NA	NA	NA	rs4535948	0.3	0.3	0.294	0.273363	0.3082	0.3214	0.2421	0.2133	0.2914	0.31	0.37	0.27	0.25	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.040168	NA	NA	NA	NA	NA	0.326	NA	3.5251333
1300	1	150249101	150249101	C	A	intronic	C1orf54	NA	NA	NA	intronic	ENSG00000118292	NA	NA	NA	NA	NA	1q21.2	NA	NA	NA	NA	rs11205354	0.65	0.65	0.639	0.6877	0.4751	0.6915	0.6859	0.8994	0.6176	0.47	0.67	0.65	0.9	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.702572	NA	NA	NA	NA	NA	0.659	NA	3.5249
1300	6	35965810	35965810	C	T	intronic	SLC26A8	NA	NA	NA	intronic	ENSG00000112053	NA	NA	NA	NA	NA	6p21.31	NA	NA	NA	NA	rs3800369	0.38	0.38	0.379	0.413339	0.4751	0.3105	0.3646	0.3578	0.5654	0.46	0.31	0.38	0.36	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.69013	1.69013	NA	NA	NA	NA	0.348	NA	3.5249
1300	7	101183108	101183108	T	C	intronic	COL26A1	NA	NA	NA	intronic	ENSG00000160963	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs6465817	0.42	0.42	0.439	0.429513	0.4751	0.0962	0.3501	0.7648	0.3292	0.49	0.09	0.36	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.308653	NA	NA	NA	NA	NA	0.652	NA	3.5249
1300	14	22070944	22070944	A	G	intergenic	OR10G3,OR10G2	dist=32069;dist=31122	NA	NA	ncRNA_exonic	ENSG00000169202	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs12893117	0.41	0.41	0.4	0.386382	0.4751	0.4167	0.5447	0.264	0.317	0.47	0.41	0.49	0.28	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.827433	NA	NA	NA	NA	NA	0.413	NA	3.5249
1300	17	80544930	80544930	T	C	intronic	FOXK2	NA	NA	NA	intronic	ENSG00000141568	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs9914529	0.23	0.23	0.218	0.261981	0.1431	0.2153	0.2651	0.407	0.2342	0.13	0.22	0.27	0.36	0.1875	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.167529	NA	NA	0.144902	0.370741	NA	0.203	NA	3.524498
1300	11	124190137	124190137	A	G	upstream	OR8D2	NA	NA	NA	UTR5	ENSG00000197263	ENST00000357438:c.-44T>C	NA	NA	NA	NA	11q24.2	NA	NA	NA	NA	rs2466621	0.24	0.24	0.249	0.278155	0.1292	0.1905	0.2017	0.4539	0.3384	0.13	0.22	0.2	0.46	0.2006	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.009593	NA	NA	0.145756	0.407685	NA	0.355	NA	3.524444
1300	12	9260280	9260280	T	C	intronic	A2M	NA	NA	NA	intronic	ENSG00000175899	NA	NA	NA	NA	NA	12p13.31	NA	Name=Pol2	NA	NA	rs226388	0.46	0.46	0.481	0.471046	0.497	0.122	0.5115	0.7927	0.3405	0.5	0.12	0.52	0.76	0.4733	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.420494	NA	NA	0.505275	0.756966	NA	0.572	NA	3.524425
1300	7	129853251	129853251	T	G	intronic	SSMEM1	NA	NA	NA	intronic	ENSG00000165120	NA	NA	NA	NA	NA	7q32.2	NA	NA	NA	NA	rs6969994	0.19	0.19	0.204	0.1875	0.2366	0.0069	0.1499	0.3593	0.1176	0.24	0.0017	0.17	0.36	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.681302	NA	NA	0.239158	0.337428	NA	0.246	NA	3.524242
1300	1	110458234	110458234	G	A	intronic	CSF1	NA	NA	NA	intronic	ENSG00000184371	NA	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	rs2275123	0.21	0.21	0.187	0.191693	0.1292	0.376	0.1657	0.1694	0.1145	0.13	0.37	0.19	0.17	0.183	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.154403	NA	NA	0.163605	0.188153	NA	0.225	NA	3.524195
1300	20	23586547	23586547	C	T	UTR5	CST9	NM_001008693:c.-46G>A	NA	NA	upstream	ENSG00000173335	NA	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	rs62207039	0.14	0.14	0.132	0.149361	0.1332	0.2014	0.1801	0.0703	0.1973	0.12	0.21	0.16	0.1	0.1725	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.784173	NA	NA	0.170349	0.088062	NA	0.109	NA	3.523951
1300	4	76797950	76797950	G	A	intronic	PPEF2	NA	NA	NA	intronic	ENSG00000156194	NA	NA	NA	NA	NA	4q21.1	NA	NA	NA	NA	rs13132709	0.27	0.27	0.264	0.247204	0.4761	0.0169	0.2522	0.2443	0.2495	0.47	0.02	0.28	0.23	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.975106	NA	NA	NA	NA	NA	0.348	NA	3.5239
1300	8	141549291	141549291	A	G	intronic	AGO2	NA	NA	NA	intronic	ENSG00000123908	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs2977469	0.56	0.56	0.547	0.553315	0.4761	0.6389	0.5663	0.5401	0.5532	0.48	0.67	0.52	0.57	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.58851	NA	NA	NA	NA	NA	0.587	NA	3.5239
1300	14	22070898	22070898	T	G	intergenic	OR10G3,OR10G2	dist=32023;dist=31168	NA	NA	ncRNA_exonic	ENSG00000169202	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs12897308	0.42	0.42	0.4	0.392173	0.4761	0.4167	0.5461	0.2844	0.317	0.47	0.41	0.49	0.31	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.578089	NA	NA	NA	NA	NA	0.442	NA	3.5239
1300	15	83543958	83543958	C	T	intronic	HOMER2	NA	NA	NA	intronic	ENSG00000103942	NA	NA	NA	NA	NA	15q25.2	NA	NA	NA	NA	rs1256454	0.52	0.52	0.53	0.506989	0.4761	0.629	0.4121	0.497	0.4939	0.47	0.64	0.44	0.5	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.027446	NA	NA	NA	NA	NA	0.449	NA	3.5239
1300	19	53156944	53156944	A	G	intronic	ZNF83	NA	NA	NA	intronic	ENSG00000167766	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs329941	0.59	0.59	0.575	0.600439	0.4761	0.7063	0.67	0.6528	0.499	0.48	0.72	0.57	0.62	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.578625	NA	NA	NA	NA	NA	0.493	NA	3.5239
1300	20	45809652	45809652	A	G	intronic	EYA2	NA	NA	NA	intronic	ENSG00000064655	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs2235907	0.56	0.56	0.612	0.569089	0.4761	0.5119	0.389	0.8835	0.4264	0.5	0.48	0.43	0.86	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.485459	NA	NA	NA	NA	NA	0.674	NA	3.5239
1300	20	45811788	45811788	G	T	intronic	EYA2	NA	NA	NA	intronic	ENSG00000064655	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs8124995	0.56	0.56	0.608	0.565895	0.4761	0.5119	0.3876	0.8684	0.4315	0.5	0.48	0.43	0.83	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.034083	NA	NA	NA	NA	NA	0.674	NA	3.5239
1300	20	45811860	45811860	A	G	intronic	EYA2	NA	NA	NA	intronic	ENSG00000064655	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs8124918	0.56	0.56	0.597	0.564097	0.4761	0.5119	0.3876	0.8654	0.4264	0.5	0.48	0.43	0.83	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.891793	NA	NA	NA	NA	NA	0.674	NA	3.5239
1300	20	50238545	50238545	A	G	intronic	ATP9A	NA	NA	NA	intronic	ENSG00000054793	NA	NA	NA	NA	NA	20q13.2	NA	NA	NA	NA	rs2235862	0.46	0.46	0.434	0.47504	0.4761	0.2262	0.5994	0.6551	0.3988	0.47	0.27	0.56	0.62	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.432972	NA	NA	NA	NA	NA	0.362	NA	3.5239
1300	3	10085130	10085130	C	G	intronic	FANCD2	NA	NA	NA	intronic	ENSG00000144554	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs9809061	0.21	0.21	0.204	0.211661	0.1392	0.0486	0.1671	0.4713	0.135	0.14	0.07	0.18	0.48	0.1758	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.178124	NA	NA	0.161234	0.404031	NA	0.362	NA	3.523766
1300	1	145301697	145301697	C	T	intronic	NBPF10,NBPF9	NA	NA	NA	intronic	ENSG00000163386,ENSG00000255168	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs61814640	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.477	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.158826	NA	NA	NA	NA	NA	NA	NA	3.523
1300	4	70152685	70152685	C	G	intronic	UGT2B28	NA	NA	NA	intronic	ENSG00000135226	NA	NA	NA	NA	NA	4q13.2	NA	NA	NA	NA	rs4386668	0.4	0.4	0.399	0.385383	0.4771	0.381	0.4553	0.3003	0.3609	0.49	0.37	0.43	0.26	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.439152	NA	NA	NA	NA	ID=COSN167235;OCCURENCE=1(large_intestine)	0.42	NA	3.5229
1300	6	155109309	155109309	G	A	intronic	SCAF8	NA	NA	NA	intronic	ENSG00000213079	NA	NA	NA	NA	NA	6q25.2	NA	NA	NA	NA	rs9322479	0.69	0.69	0.718	0.746406	0.4771	0.9087	0.5922	0.941	0.7025	0.46	0.91	0.57	0.9	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.77923	NA	NA	NA	NA	NA	0.601	NA	3.5229
1300	9	140392494	140392494	T	C	intronic	PNPLA7	NA	NA	NA	intronic	ENSG00000130653	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs4962232	0.54	0.54	0.535	0.503195	0.4771	0.6637	0.4654	0.4781	0.4254	0.49	0.68	0.47	0.5	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.551475	NA	NA	NA	NA	NA	0.457	NA	3.5229
1300	14	23851874	23851874	A	G	intronic	MYH6	NA	NA	NA	intronic	ENSG00000197616	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs178636	0.47	0.47	0.474	0.448682	0.4771	0.2599	0.3501	0.6172	0.456	0.49	0.29	0.41	0.69	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.177075	NA	NA	NA	NA	NA	0.399	NA	3.5229
1300	17	4720131	4720131	C	G	intronic	PLD2	NA	NA	NA	intronic	ENSG00000129219	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs2302325	0.51	0.51	0.523	0.517772	0.4771	0.4067	0.4683	0.7784	0.3569	0.44	0.41	0.46	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.985259	NA	NA	NA	NA	NA	0.522	NA	3.5229
1300	19	52383569	52383569	A	C	intronic	ZNF577	NA	NA	NA	intronic	ENSG00000161551	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs8110461	0.24	0.24	0.224	0.308706	0.1412	0.3046	0.2262	0.385	0.4407	0.13	0.3	0.25	0.33	0.2143	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.495543	NA	NA	0.122093	0.352928	NA	0.203	NA	3.522407
1300	19	52383556	52383556	C	A	intronic	ZNF577	NA	NA	NA	intronic	ENSG00000161551	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs8110546	0.24	0.24	0.22	0.308706	0.1412	0.3046	0.2262	0.385	0.4407	0.13	0.3	0.25	0.33	0.2143	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.8049	NA	NA	0.122209	0.353155	NA	0.203	NA	3.522291
1300	3	10084224	10084224	C	T	intronic	FANCD2	NA	NA	NA	intronic	ENSG00000144554	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs9879080	0.21	0.21	0.216	0.210663	0.1392	0.0466	0.1671	0.4697	0.1339	0.15	0.07	0.19	0.47	0.1743	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.619229	NA	NA	0.164302	0.425102	NA	0.362	NA	3.522198
1300	11	43908104	43908104	T	G	intronic	ALKBH3	NA	NA	NA	intronic	ENSG00000166199	NA	NA	NA	NA	NA	11p11.2	NA	NA	NA	NA	rs3740983	0.26	0.26	0.23	0.275559	0.2366	0.2391	0.4236	0.1377	0.4346	0.25	0.27	0.41	0.15	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.251337	NA	NA	0.241346	0.169643	NA	0.268	NA	3.522054
1300	5	132159520	132159520	T	A	intronic	SHROOM1	NA	NA	NA	intronic	ENSG00000164403	NA	NA	NA	NA	NA	5q31.1	NA	NA	NA	NA	rs66542366	0.24	0.24	0.235	0.251997	0.1412	0.253	0.1239	0.4501	0.1881	0.14	0.25	0.14	0.45	0.1879	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.346631	NA	NA	0.148941	0.391512	NA	0.29	NA	3.521959
1300	4	26491156	26491156	G	A	intronic	CCKAR	NA	NA	NA	intronic	ENSG00000163394	NA	NA	NA	NA	NA	4p15.2	NA	NA	NA	NA	rs6850415	0.09	0.09	0.076	0.0832668	0.171	0.0099	0.1095	0.028	0.1247	0.17	0.01	0.13	0.02	0.1346	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.715557	NA	NA	0.172442	0.051067	NA	0.065	NA	3.521958
1300	3	125833260	125833260	C	T	intronic	ALDH1L1	NA	NA	NA	intronic	ENSG00000144908	NA	NA	NA	NA	NA	3q21.3	NA	NA	NA	NA	rs2290053	0.43	0.43	0.437	0.430112	0.4781	0.3651	0.402	0.4917	0.3845	0.47	0.34	0.43	0.49	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.443797	NA	NA	NA	NA	NA	0.406	NA	3.5219
1300	5	110491533	110491533	C	T	intergenic	WDR36,CAMK4	dist=25333;dist=68414	NA	NA	ncRNA_exonic	ENSG00000250728	NA	NA	NA	NA	NA	5q22.1	NA	NA	NA	NA	rs252873	0.38	0.38	0.338	0.384385	0.4781	0.2738	0.5029	0.295	0.4387	0.47	0.24	0.5	0.3	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.995747	NA	NA	NA	NA	NA	0.37	NA	3.5219
1300	11	72302191	72302191	C	G	intronic	PDE2A	NA	NA	NA	intronic	ENSG00000186642	NA	NA	NA	NA	NA	11q13.4	NA	NA	NA	NA	rs429075	0.66	0.66	0.654	0.674321	0.4781	0.755	0.6772	0.8011	0.6196	0.49	0.78	0.62	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.558819	2.558819	NA	NA	NA	NA	0.616	NA	3.5219
1300	11	121414550	121414550	G	A	intronic	SORL1	NA	NA	NA	intronic	ENSG00000137642	NA	NA	NA	NA	NA	11q24.1	NA	NA	NA	NA	rs682021	0.47	0.47	0.447	0.449081	0.4781	0.5536	0.4697	0.3359	0.4499	0.47	0.56	0.48	0.33	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.55544	NA	NA	NA	NA	NA	0.507	NA	3.5219
1300	15	81180981	81180981	G	A	intronic	KIAA1199	NA	NA	NA	intronic	ENSG00000103888	NA	NA	NA	NA	NA	15q25.1	NA	NA	NA	NA	rs8028511	0.36	0.36	0.366	0.35623	0.4781	0.2202	0.2421	0.4266	0.3569	0.49	0.2	0.25	0.44	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.677475	NA	NA	NA	NA	NA	0.341	NA	3.5219
1300	22	29957321	29957321	G	A	intronic	NIPSNAP1	NA	NA	NA	intronic	ENSG00000184117	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs6361	0.47	0.47	0.467	0.546526	0.4781	0.2708	0.6095	0.6838	0.6708	0.48	0.26	0.58	0.64	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.484169	NA	NA	NA	NA	NA	0.428	NA	3.5219
1300	4	42025284	42025284	A	G	intronic	SLC30A9	NA	NA	NA	intronic	ENSG00000014824	NA	NA	NA	NA	NA	4p13	NA	NA	NA	NA	rs4861153	0.21	0.21	0.227	0.243011	0.1551	0.0387	0.147	0.587	0.1472	0.14	0.03	0.16	0.56	0.1718	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.161668	NA	NA	0.151279	0.534044	NA	0.254	NA	3.521821
1300	8	6478960	6478960	C	G	intronic	MCPH1	NA	NA	NA	ncRNA_exonic	ENSG00000249898	NA	NA	NA	NA	NA	8p23.1	NA	NA	NA	NA	rs11137040	0.22	0.22	0.209	0.203075	0.2873	0.0714	0.1585	0.2375	0.2372	0.29	0.07	0.19	0.28	0.2482	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.594753	NA	NA	0.276515	0.234159	NA	0.384	NA	3.5213183
1300	2	220047393	220047393	C	T	UTR3	FAM134A	NM_024293:c.*42C>T	NA	NA	UTR3	ENSG00000144567	ENST00000430297:c.*42C>T,ENST00000273048:c.*1049C>T,ENST00000420189:c.*42C>T	NA	NA	Score=329;Name=lod=29	NA	2q35	NA	NA	NA	NA	rs3731901	0.43	0.43	0.414	0.403155	0.6372	0.2331	0.3991	0.2315	0.5726	0.65	0.25	0.45	0.27	0.5504	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.710649	3.710649	NA	0.624651	0.285747	NA	0.478	NA	3.5210824
1300	9	79328461	79328461	G	A	intronic	PRUNE2	NA	NA	NA	intronic	ENSG00000106772	NA	NA	NA	NA	NA	9q21.2	NA	NA	NA	NA	rs9785303	0.26	0.26	0.246	0.236621	0.1541	0.4643	0.1614	0.2073	0.18	0.15	0.5	0.14	0.22	0.2018	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.771992	NA	NA	0.123116	0.199298	NA	0.167	NA	3.520984
1300	1	16359827	16359827	A	G	intronic	CLCNKA	NA	NA	NA	intronic	ENSG00000186510	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs3738633	0.58	0.58	0.555	0.590455	0.4791	0.7569	0.402	0.6581	0.5757	0.47	0.74	0.43	0.66	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.046007	NA	NA	NA	NA	NA	0.478	NA	3.5209
1300	2	160182074	160182074	T	A	intronic	BAZ2B	NA	NA	NA	intronic	ENSG00000123636	NA	NA	NA	NA	NA	2q24.2	NA	NA	NA	NA	rs440241	0.7	0.7	0.71	0.757188	0.4791	0.9494	0.7089	0.7693	0.863	0.49	0.95	0.66	0.78	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.266486	NA	NA	NA	NA	NA	0.601	NA	3.5209
1300	3	12560763	12560763	A	T	intronic	TSEN2	NA	NA	NA	intronic	ENSG00000154743	NA	NA	NA	NA	NA	3p25.2	NA	NA	NA	NA	rs1618545	0.42	0.42	0.453	0.370208	0.4791	0.1091	0.3703	0.6392	0.1636	0.49	0.11	0.43	0.66	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.388396	NA	NA	NA	NA	NA	0.471	NA	3.5209
1300	6	155124583	155124583	T	G	intronic	SCAF8	NA	NA	NA	intronic	ENSG00000213079	NA	NA	NA	NA	NA	6q25.2	NA	NA	NA	NA	rs3757291	0.68	0.68	0.715	0.729832	0.4791	0.9087	0.5908	0.8767	0.7035	0.46	0.91	0.56	0.84	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.207384	NA	NA	NA	NA	NA	0.58	NA	3.5209
1300	8	113254073	113254073	G	A	intronic	CSMD3	NA	NA	NA	intronic	ENSG00000164796	NA	NA	NA	NA	NA	8q23.3	NA	NA	NA	NA	rs1007815	NA	NA	NA	0.561701	0.4791	0.5556	0.4654	0.7632	0.4489	NA	NA	NA	NA	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.203199	NA	NA	NA	NA	NA	0.29	NA	3.5209
1300	9	95647120	95647120	T	C	intergenic	ZNF484,FGD3	dist=6800;dist=62481	NA	NA	ncRNA_intronic	ENSG00000187984,ENSG00000226668	NA	NA	NA	NA	NA	9q22.31	NA	NA	NA	NA	rs12685086	0.59	0.59	0.578	0.586062	0.4791	0.6181	0.5663	0.7579	0.4448	0.46	0.62	0.6	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.582173	NA	NA	NA	NA	NA	0.514	NA	3.5209
1300	9	95647527	95647527	C	A	intergenic	ZNF484,FGD3	dist=7207;dist=62074	NA	NA	ncRNA_exonic	ENSG00000226668	NA	NA	NA	NA	NA	9q22.31	NA	NA	NA	NA	rs1966189	0.59	0.59	0.572	0.585863	0.4791	0.6181	0.5663	0.7572	0.4448	0.46	0.62	0.6	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.634397	NA	NA	NA	NA	NA	0.522	NA	3.5209
1300	9	95647974	95647974	G	C	intergenic	ZNF484,FGD3	dist=7654;dist=61627	NA	NA	ncRNA_exonic	ENSG00000226668	NA	NA	NA	NA	NA	9q22.31	NA	NA	NA	NA	rs2281715	0.59	0.59	0.56	0.585863	0.4791	0.6181	0.5663	0.7572	0.4448	0.47	0.62	0.6	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.939166	NA	NA	NA	NA	NA	0.507	NA	3.5209
1300	9	95648441	95648441	C	T	intergenic	ZNF484,FGD3	dist=8121;dist=61160	NA	NA	ncRNA_exonic	ENSG00000226668	NA	NA	NA	NA	NA	9q22.31	NA	NA	NA	NA	rs2281717	0.57	0.57	0.53	0.557508	0.4791	0.6181	0.5576	0.6543	0.4448	0.46	0.62	0.59	0.66	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.886794	NA	NA	NA	NA	NA	0.275	NA	3.5209
1300	15	31089526	31089526	A	G	intergenic	LOC100288637,HERC2P10	dist=24317;dist=20713	NA	NA	ncRNA_exonic	ENSG00000103832	NA	NA	NA	NA	NA	15q13.2	NA	NA	NA	NA	rs798088	0.45	0.45	0.421	0.47524	0.4791	0.1627	0.4539	0.792	0.3804	0.47	0.13	0.43	0.78	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.360488	NA	NA	NA	NA	NA	0.362	NA	3.5209
1300	16	21728129	21728129	G	T	intronic	OTOA	NA	NA	NA	intronic	ENSG00000155719	NA	NA	NA	NA	NA	16p12.2	NA	NA	NA	NA	rs215904	0.35	0.35	NA	0.366014	0.4791	0.1786	0.3746	0.3631	0.4407	0.47	0.13	0.39	0.37	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.504537	NA	NA	NA	NA	NA	0.42	NA	3.5209
1300	17	20884868	20884868	C	T	intergenic	CCDC144NL,USP22	dist=85415;dist=18038	NA	NA	ncRNA_exonic	ENSG00000233098,ENSG00000264660,ENSG00000266009	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs11654680	0.43	0.43	0.419	0.429712	0.4791	0.4673	0.3646	0.2995	0.5624	0.48	0.51	0.35	0.33	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.152028	NA	NA	NA	NA	NA	0.355	NA	3.5209
1300	X	77276413	77276413	C	A	intronic	ATP7A	NA	NA	NA	intronic	ENSG00000165240	NA	NA	NA	NA	NA	Xq21.1	NA	NA	NA	NA	rs113968994	0.29	0.29	0.30763	NA	NA	NA	NA	NA	NA	0.24	0.29	0.22	0.42	0.2542	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.252908	NA	NA	0.2249	0.356975	NA	0.203	NA	3.5209
1300	3	124485235	124485235	A	G	intronic	ITGB5	NA	NA	NA	intronic	ENSG00000082781	NA	NA	NA	NA	NA	3q21.2	NA	NA	NA	NA	rs2291081	0.16	0.16	0.122	0.16853	0.1431	0.1637	0.2594	0.1331	0.183	0.13	0.18	0.23	0.13	0.1751	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.144815	2.144815	NA	0.161047	0.135951	NA	0.174	NA	3.520753
1300	6	90453263	90453263	A	G	intronic	MDN1	NA	NA	NA	intronic	ENSG00000112159	NA	NA	NA	NA	NA	6q15	NA	NA	NA	NA	rs2273246	0.11	0.11	NA	0.153754	0.1869	0.0813	0.1225	0.0779	0.319	0.17	0.07	0.11	0.08	0.1738	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.664628	NA	NA	0.118605	0.051975	NA	NA	NA	3.520695
1300	3	52815905	52815905	T	C	intronic	ITIH1	NA	NA	NA	intronic	ENSG00000055957	NA	NA	NA	NA	NA	3p21.1	NA	NA	Name=6	NA	rs2710323	0.56	0.56	0.577	0.521765	0.505	0.4147	0.6009	0.7216	0.3231	0.51	0.47	0.62	0.68	0.4884	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.854508	NA	NA	0.486279	0.660009	NA	0.551	NA	3.520321
1300	19	10432334	10432334	T	G	intronic	RAVER1	NA	NA	NA	intronic	ENSG00000161847	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs12983649	0.16	0.16	0.132	0.171925	0.1571	0.1974	0.3156	0.0575	0.2137	0.16	0.22	0.25	0.03	0.1844	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.718268	NA	NA	0.138252	0.065764	NA	0.145	NA	3.520248
1300	7	140706157	140706157	G	T	UTR3	MRPS33	NM_053035:c.*73C>A,NM_016071:c.*73C>A	NA	NA	UTR3	ENSG00000090263	ENST00000393008:c.*73C>A,ENST00000324787:c.*73C>A,ENST00000469351:c.*73C>A,ENST00000496958:c.*73C>A,ENST00000467334:c.*73C>A	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs6662	0.89	0.89	0.879	0.890375	0.8131	0.9038	0.9107	0.9584	0.8497	0.82	0.92	0.9	0.95	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.593073	NA	NA	NA	NA	NA	0.913	NA	3.5202334
1300	2	20160250	20160250	G	C	intronic	WDR35	NA	NA	NA	intronic	ENSG00000118965	NA	NA	NA	NA	NA	2p24.1	NA	NA	NA	NA	rs12996974	0.25	0.25	0.259	0.229034	0.2247	0.2292	0.2262	0.2617	0.1912	0.23	0.27	0.22	0.28	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.100646	2.100646	NA	0.255089	0.240955	NA	0.152	NA	3.520211
1300	13	59104084	59104084	G	C	intergenic	PCDH17,DIAPH3	dist=801019;dist=1135637	NA	NA	ncRNA_exonic	ENSG00000214335	NA	NA	NA	NA	NA	13q21.1	NA	NA	NA	NA	rs9538095	0.32	0.32	0.277	0.291933	0.4801	0.3294	0.3401	0.0514	0.3507	0.47	0.3	0.38	0.06	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.837708	NA	NA	NA	NA	NA	0.225	NA	3.5199
1300	1	16359106	16359106	C	T	intronic	CLCNKA	NA	NA	NA	intronic	ENSG00000186510	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs10803408	0.58	0.58	0.602	0.591853	0.4801	0.7599	0.402	0.6581	0.5787	0.47	0.74	0.43	0.66	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.12825	NA	NA	NA	NA	NA	0.543	NA	3.5199
1300	7	97920270	97920270	T	C	intronic	BRI3	NA	NA	NA	intronic	ENSG00000164713	NA	NA	NA	NA	NA	7q21.3	NA	NA	NA	NA	rs7778015	NA	NA	NA	0.28734	0.4801	0.2688	0.3516	0.2163	0.1585	NA	NA	NA	NA	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.602168	NA	NA	NA	NA	NA	0.268	NA	3.5199
1300	8	132002576	132002576	G	A	intronic	ADCY8	NA	NA	NA	intronic	ENSG00000155897	NA	NA	NA	NA	NA	8q24.22	NA	NA	NA	NA	rs1329803	0.68	0.68	0.666	0.697085	0.4801	0.8651	0.5403	0.8722	0.6217	0.49	0.87	0.55	0.85	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.182022	NA	NA	NA	NA	NA	0.572	NA	3.5199
1300	9	4117713	4117713	C	T	intronic	GLIS3	NA	NA	NA	intronic	ENSG00000107249	NA	NA	NA	NA	NA	9p24.2	NA	NA	NA	NA	rs927315	0.38	0.38	0.366	0.411941	0.4801	0.3333	0.3919	0.2799	0.6155	0.49	0.3	0.44	0.29	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.41038	NA	NA	NA	NA	NA	0.362	NA	3.5199
1300	10	50863623	50863623	A	G	intronic	CHAT	NA	NA	NA	intronic	ENSG00000070748	NA	NA	NA	NA	NA	10q11.23	NA	NA	NA	NA	rs7094421	0.37	0.37	0.379	0.354034	0.4801	0.1042	0.3963	0.4788	0.2832	0.49	0.13	0.4	0.44	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.725285	NA	NA	NA	NA	NA	0.37	NA	3.5199
1300	3	10119917	10119917	T	C	intronic	FANCD2	NA	NA	NA	intronic	ENSG00000144554	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs6805869	0.21	0.21	0.225	0.211462	0.1412	0.0486	0.1671	0.469	0.135	0.15	0.07	0.19	0.47	0.175	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.078982	NA	NA	0.163953	0.424875	NA	0.362	NA	3.519847
1300	2	187519338	187519338	G	T	intronic	ITGAV	NA	NA	NA	ncRNA_intronic	ENSG00000227227	NA	NA	NA	NA	NA	2q32.1	NA	NA	NA	NA	rs9333290	0.16	0.16	0.12	0.148363	0.2962	0.0427	0.2205	0.0083	0.2434	0.31	0.03	0.22	0.01	0.244	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.437507	NA	NA	0.273406	0.051434	NA	0.109	NA	3.5197273
1300	16	50348409	50348409	A	T	intronic	ADCY7	NA	NA	NA	UTR3	ENSG00000166164	ENST00000562383:c.*1470T>A	NA	NA	NA	NA	16q12.1	NA	NA	NA	NA	rs9926131	0.41	0.41	0.371	0.402157	0.6471	0.2044	0.4914	0.211	0.5491	0.64	0.21	0.51	0.21	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.466188	NA	NA	NA	NA	NA	0.529	NA	3.5195667
1300	6	24418854	24418854	T	C	intronic	MRS2	NA	NA	NA	intronic	ENSG00000124532	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs45590133	0.13	0.13	0.115	0.113019	0.1938	0.1478	0.0965	0.0038	0.1534	0.2	0.16	0.09	0.01	0.1449	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.62883	NA	NA	0.142093	0.029091	NA	0.094	NA	3.519207
1300	19	18324329	18324329	C	T	intronic	PDE4C	NA	NA	NA	ncRNA_intronic	ENSG00000268650	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs2302209	0.19	0.19	0.185	0.165735	0.2863	0.0605	0.2133	0.1619	0.1217	0.28	0.06	0.23	0.15	0.2492	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.78662	NA	NA	0.278721	0.172946	NA	0.217	NA	3.5191123
1300	1	1163804	1163804	C	T	intronic	SDF4	NA	NA	NA	intronic	ENSG00000078808	NA	NA	NA	NA	NA	1p36.33	NA	NA	NA	NA	rs7515488	0.19	0.19	0.17	0.186901	0.1461	0.1835	0.1599	0.2368	0.184	0.16	0.21	0.14	0.25	0.191	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.135693	NA	NA	0.14389	0.207612	NA	0.225	NA	3.51901
1300	15	28517539	28517539	G	A	intronic	HERC2	NA	NA	NA	intronic	ENSG00000128731	NA	NA	NA	NA	NA	15q13.1	NA	NA	NA	NA	rs80340439	NA	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.481	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.16105	NA	NA	NA	NA	NA	NA	NA	3.519
1300	3	183801649	183801649	G	C	intergenic	HTR3C,HTR3E	dist=23188;dist=13203	NA	NA	ncRNA_exonic	ENSG00000233576	NA	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs7610048	0.55	0.55	0.524	0.509185	0.4811	0.7282	0.5231	0.4644	0.363	0.48	0.74	0.54	0.44	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.549041	NA	NA	NA	NA	ID=COSN167104;OCCURENCE=1(large_intestine)	0.5	NA	3.5189
1300	7	87138511	87138511	G	A	intronic	ABCB1	NA	NA	NA	intronic	ENSG00000085563	NA	NA	NA	NA	NA	7q21.12	NA	NA	NA	NA	rs2235048	0.6	0.6	0.622	0.602436	0.4811	0.6012	0.5634	0.8502	0.4213	0.47	0.6	0.53	0.85	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.591686	NA	NA	NA	NA	NA	0.587	NA	3.5189
1300	15	31090601	31090601	T	C	intergenic	LOC100288637,HERC2P10	dist=25392;dist=19638	NA	NA	ncRNA_exonic	ENSG00000103832	NA	NA	NA	NA	NA	15q13.2	NA	NA	NA	NA	rs1852033	0.44	0.44	0.414	0.47524	0.4811	0.1607	0.4539	0.7927	0.3793	0.47	0.13	0.43	0.78	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.357833	NA	NA	NA	NA	NA	0.326	NA	3.5189
1300	16	55539191	55539191	C	G	intronic	MMP2	NA	NA	NA	intronic	ENSG00000087245	NA	NA	NA	NA	NA	16q12.2	NA	NA	NA	NA	rs243832	0.52	0.52	0.506	0.532149	0.4811	0.6409	0.4352	0.5015	0.5828	0.46	0.64	0.46	0.51	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.848133	NA	NA	NA	NA	NA	0.58	NA	3.5189
1300	17	42005060	42005060	A	C	intergenic	FAM215A,PPY	dist=9705;dist=13112	NA	NA	ncRNA_exonic	ENSG00000267420	NA	NA	NA	NA	NA	17q21.31	NA	NA	NA	NA	rs1642610	0.29	0.29	0.24	0.247204	0.4811	0.1716	0.3213	0.0953	0.2372	0.49	0.14	0.35	0.1	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.426644	NA	NA	NA	NA	NA	0.217	NA	3.5189
1300	19	45571903	45571903	G	C	intronic	CLASRP	NA	NA	NA	intronic	ENSG00000104859	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs36097205	0.38	0.38	NA	0.329073	0.4811	0.4028	0.3761	0.1823	0.2618	0.48	0.41	0.39	0.18	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.826	NA	NA	NA	NA	NA	NA	NA	3.5189
1300	11	60776333	60776333	C	T	intronic	CD6	NA	NA	NA	intronic	ENSG00000013725	NA	NA	NA	NA	NA	11q12.2	NA	NA	NA	NA	rs72926536	0.1	0.1	0.065	0.0686901	0.1948	0.001	0.121	0.0091	0.0521	0.2	0.0017	0.14	0.02	0.1399	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.304839	NA	NA	0.146455	0.026051	NA	NA	NA	3.518845
1300	6	154535444	154535444	A	G	intronic	IPCEF1,OPRM1	NA	NA	NA	intronic	ENSG00000074706,ENSG00000112038	NA	NA	NA	NA	NA	6q25.2	NA	NA	NA	NA	rs2293537	0.19	0.19	0.193	0.192692	0.171	0.2113	0.121	0.1982	0.2393	0.16	0.22	0.15	0.22	0.1625	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.11096	NA	NA	0.147791	0.19133	NA	0.188	NA	3.518709
1300	19	54240015	54240015	C	T	upstream	MIR516B1	NA	NA	NA	upstream	ENSG00000207946	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs73053529	0.08	0.08	0.083	0.0814696	0.1481	0.0317	0.0576	0.0197	0.1646	0.15	0.02	0.07	0.04	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.984266	NA	NA	NA	NA	NA	0.196	NA	3.5185666
1300	3	109052934	109052934	G	A	intronic	DPPA4	NA	NA	NA	intronic	ENSG00000121570	NA	NA	NA	NA	NA	3q13.13	NA	NA	NA	NA	rs7642495	0.49	0.49	0.466	0.483826	0.4821	0.751	0.4697	0.2231	0.5726	0.47	0.73	0.46	0.27	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.689631	NA	NA	NA	NA	NA	0.304	NA	3.5179
1300	3	183801248	183801248	A	G	intergenic	HTR3C,HTR3E	dist=22787;dist=13604	NA	NA	ncRNA_exonic	ENSG00000233576	NA	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs7429958	0.63	0.63	0.638	0.583866	0.4821	0.7421	0.572	0.711	0.362	0.48	0.76	0.58	0.73	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.661373	NA	NA	NA	NA	NA	0.609	NA	3.5179
1300	3	183801541	183801541	G	C	intergenic	HTR3C,HTR3E	dist=23080;dist=13311	NA	NA	ncRNA_intronic	ENSG00000233576	NA	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs9826114	0.57	0.57	0.541	0.544728	0.4821	0.7292	0.5303	0.6021	0.3517	0.48	0.74	0.55	0.54	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.205947	NA	NA	NA	NA	NA	0.543	NA	3.5179
1300	9	27202726	27202726	A	T	intronic	TEK	NA	NA	NA	intronic	ENSG00000120156	NA	NA	NA	NA	NA	9p21.2	NA	NA	NA	NA	rs550722	0.4	0.4	0.016	0.414137	0.4821	0.3978	0.5086	0.3336	0.4029	0.46	0.39	0.48	0.27	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.332592	NA	NA	NA	NA	NA	NA	NA	3.5179
1300	11	122489595	122489595	G	A	intergenic	MIR100HG,UBASH3B	dist=415825;dist=36803	NA	NA	ncRNA_exonic	ENSG00000254935	NA	NA	NA	NA	NA	11q24.1	NA	NA	NA	NA	rs1308	0.52	0.52	0.504	0.517372	0.4821	0.624	0.4841	0.5182	0.4663	0.46	0.64	0.46	0.51	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.402233	NA	NA	NA	NA	NA	0.442	NA	3.5179
1300	15	70344616	70344616	A	G	intronic	TLE3	NA	NA	NA	intronic	ENSG00000140332	NA	NA	NA	NA	NA	15q23	NA	NA	NA	NA	rs3743310	0.35	0.35	0.34	0.366414	0.4821	0.256	0.4784	0.236	0.4581	0.47	0.25	0.46	0.22	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.932581	NA	NA	NA	NA	NA	0.435	NA	3.5179
1300	20	31676622	31676622	G	T	intronic	BPIFB4	NA	NA	NA	intronic	ENSG00000186191	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs2424949	0.62	0.62	0.608	0.614617	0.4821	0.7996	0.5504	0.6324	0.5818	0.49	0.81	0.53	0.65	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.952797	NA	NA	NA	NA	NA	0.601	NA	3.5179
1300	5	64447777	64447777	C	T	intronic	ADAMTS6	NA	NA	NA	intronic	ENSG00000049192	NA	NA	NA	NA	NA	5q12.3	NA	NA	Name=40	NA	rs17206779	0.4	0.4	0.355	0.377196	0.4911	0.3859	0.5231	0.1664	0.4325	0.48	0.4	0.53	0.17	0.4777	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.808054	NA	NA	0.513837	0.229687	NA	0.42	NA	3.517363
1300	1	176999917	176999917	G	A	intronic	ASTN1	NA	NA	NA	intronic	ENSG00000152092	NA	NA	NA	NA	NA	1q25.2	NA	NA	NA	NA	rs12568439	0.15	0.15	0.15	0.148962	0.1471	0.256	0.2104	0.0272	0.1616	0.15	0.23	0.2	0.03	0.169	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.453697	NA	NA	0.166628	0.051748	NA	0.109	NA	3.517272
1300	12	42749072	42749072	T	C	intronic	PPHLN1	NA	NA	NA	intronic	ENSG00000134283	NA	NA	NA	NA	NA	12q12	NA	NA	NA	NA	rs17091102	0.18	0.18	0.173	0.18151	0.165	0.1498	0.219	0.1861	0.1984	0.16	0.17	0.23	0.18	0.1659	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.38458	NA	NA	0.151977	0.183386	NA	0.145	NA	3.517123
1300	7	944683	944683	C	T	intronic	ADAP1	NA	NA	NA	intronic	ENSG00000105963,ENSG00000240230	NA	NA	NA	NA	NA	7p22.3	NA	Name=FOSL1_(SC-183),CEBPB,eGFP-FOS	Name=48	NA	rs1881121	0.91	0.91	0.898	0.897364	0.8131	1	0.8775	0.9501	0.8211	0.81	1	0.87	0.97	0.8541	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.054022	NA	NA	0.815765	0.924027	NA	0.92	NA	3.517035
1300	13	61986918	61986918	C	A	exonic	PCDH20	NA	synonymous SNV	PCDH20:NM_022843:exon2:c.G1314T:p.V438V	exonic	ENSG00000197991	NA	synonymous SNV	ENSG00000197991:ENST00000409204:exon2:c.G1314T:p.V438V,ENSG00000197991:ENST00000409186:exon5:c.G1314T:p.V438V	NA	NA	13q21.2	NA	NA	NA	NA	rs3812872	0.79	0.79	0.774	0.802316	0.6938	0.9226	0.8285	0.7352	0.862	0.7	0.92	0.81	0.76	0.749	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.773857	NA	NA	0.70686	0.739219	NA	0.761	NA	3.5170066
1300	6	335251	335251	T	C	intronic	DUSP22	NA	NA	NA	intronic	ENSG00000112679	NA	NA	NA	NA	NA	6p25.3	NA	NA	NA	NA	rs3757305	NA	NA	0.39	0.484225	0.4831	0.4663	0.4755	0.4977	0.4918	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.039561	NA	NA	NA	NA	NA	NA	NA	3.5169
1300	6	335253	335253	T	C	intronic	DUSP22	NA	NA	NA	intronic	ENSG00000112679	NA	NA	NA	NA	NA	6p25.3	NA	NA	NA	NA	rs3757306	NA	NA	0.39	0.484225	0.4831	0.4663	0.4755	0.4977	0.4918	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.035193	NA	NA	NA	NA	NA	NA	NA	3.5169
1300	6	27220890	27220890	A	G	intronic	PRSS16	NA	NA	NA	intronic	ENSG00000112812	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs2295603	0.51	0.51	0.523	0.528754	0.4831	0.2748	0.4438	0.9138	0.3773	0.47	0.26	0.46	0.88	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.397937	NA	NA	NA	NA	NA	0.558	NA	3.5169
1300	6	33656654	33656654	C	G	intronic	ITPR3	NA	NA	NA	intronic	ENSG00000096433	NA	NA	NA	NA	NA	6p21.31	NA	NA	NA	NA	rs11759396	0.53	0.53	0.475	0.555511	0.4831	0.8998	0.598	0.1339	0.8149	0.49	0.88	0.6	0.14	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.065017	NA	NA	NA	NA	NA	0.5	NA	3.5169
1300	7	899710	899710	A	C	intronic	SUN1	NA	NA	NA	intronic	ENSG00000164828	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs12700166	0.52	0.52	0.513	0.50639	0.4831	0.6468	0.4323	0.4667	0.4918	0.49	0.64	0.41	0.5	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.7875	NA	NA	NA	NA	NA	0.522	NA	3.5169
1300	9	35559905	35559905	T	C	intronic	RUSC2	NA	NA	NA	intronic	ENSG00000198853	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs12338773	0.39	0.39	0.362	0.35623	0.4831	0.2877	0.6037	0.2284	0.2935	0.47	0.29	0.61	0.23	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.492056	NA	NA	NA	NA	NA	0.413	NA	3.5169
1300	9	138518114	138518114	G	A	intronic	GLT6D1	NA	NA	NA	intronic	ENSG00000204007	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs11103106	0.53	0.53	0.528	0.522564	0.4831	0.5982	0.5317	0.4289	0.6053	0.48	0.65	0.52	0.45	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.330003	NA	NA	NA	NA	NA	0.551	NA	3.5169
1300	17	38068514	38068514	T	C	intronic	GSDMB	NA	NA	NA	intronic	ENSG00000073605	NA	NA	NA	NA	NA	17q12	NA	NA	NA	NA	rs1011082	0.6	0.6	0.591	0.637979	0.4831	0.7103	0.621	0.7156	0.6299	0.48	0.68	0.61	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.80334	NA	NA	NA	NA	NA	0.616	NA	3.5169
1300	17	75485014	75485014	A	C	intronic	SEPT9	NA	NA	NA	intronic	ENSG00000184640	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs426885	0.55	0.55	0.592	0.548722	0.4831	0.4931	0.4078	0.8048	0.4274	0.48	0.49	0.44	0.81	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.422155	NA	NA	NA	NA	NA	0.399	NA	3.5169
1300	20	54940356	54940356	T	C	intronic	FAM210B	NA	NA	NA	intronic	ENSG00000124098	NA	NA	NA	NA	NA	20q13.2	NA	NA	NA	NA	rs17362970	0.11	0.11	0.103	0.095647	0.1859	NA	0.1196	0.0749	0.1125	0.18	NA	0.14	0.1	0.1346	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.260435	NA	NA	0.162791	0.066954	NA	0.08	NA	3.516709
1300	8	22428751	22428751	C	G	intronic	SORBS3	NA	NA	NA	intronic	ENSG00000120896	NA	NA	NA	NA	NA	8p21.3	NA	NA	NA	NA	rs55893847	0.11	0.11	0.095	0.120008	0.1809	0.0278	0.1268	0.0772	0.2055	0.19	0.03	0.12	0.07	0.1572	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.032465	NA	NA	0.145548	0.08293	NA	0.109	NA	3.516352
1300	14	95556747	95556747	A	T	UTR3	DICER1	NM_177438:c.*88T>A,NM_001195573:c.*204T>A,NM_030621:c.*88T>A,NM_001271282:c.*88T>A	NA	NA	UTR3	ENSG00000100697	ENST00000526495:c.*88T>A,ENST00000343455:c.*88T>A,ENST00000393063:c.*88T>A,ENST00000527414:c.*88T>A	NA	NA	NA	NA	14q32.13	NA	NA	NA	NA	rs13078	0.89	0.89	0.897	0.908946	0.8171	0.9573	0.8847	0.9319	0.9397	0.81	0.96	0.87	0.94	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.611848	NA	NA	NA	NA	NA	0.812	NA	3.5162334
1300	5	102886512	102886512	T	C	UTR3	NUDT12	NM_031438:c.*50A>G	NA	NA	UTR3	ENSG00000112874	ENST00000230792:c.*50A>G,ENST00000507423:c.*50A>G	NA	NA	NA	NA	5q21.2	NA	NA	NA	NA	rs58006145	0.25	0.25	0.24	0.246406	0.2724	0.246	0.17	0.23	0.2965	0.28	0.22	0.21	0.25	0.2646	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5776	NA	NA	0.280247	0.215615	NA	0.225	NA	3.5160864
1300	3	69053447	69053447	A	T	intronic	EOGT	NA	NA	NA	intronic	ENSG00000163378	NA	NA	NA	NA	NA	3p14.1	NA	NA	NA	NA	rs9860095	0.37	0.37	0.35	0.350839	0.4841	0.1062	0.4582	0.4092	0.3108	0.48	0.12	0.44	0.43	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.550508	2.550508	NA	NA	NA	NA	0.413	NA	3.5159
1300	3	156175167	156175167	G	A	intronic	KCNAB1	NA	NA	NA	intronic	ENSG00000169282	NA	NA	NA	NA	NA	3q25.31	NA	NA	NA	NA	rs2293194	0.39	0.39	0.486	0.507987	0.4841	0.5367	0.3559	0.5386	0.5695	0.38	0.45	0.32	0.39	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.003307	NA	NA	NA	NA	NA	NA	NA	3.5159
1300	3	156175168	156175168	G	A	intronic	KCNAB1	NA	NA	NA	intronic	ENSG00000169282	NA	NA	NA	NA	NA	3q25.31	NA	NA	NA	NA	rs2293195	0.4	0.4	0.486	0.507987	0.4841	0.5367	0.3559	0.5386	0.5695	0.38	0.46	0.32	0.4	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.169406	NA	NA	NA	NA	NA	NA	NA	3.5159
1300	4	103651962	103651962	A	C	intronic	MANBA	NA	NA	NA	intronic	ENSG00000109323	NA	NA	NA	NA	NA	4q24	NA	NA	NA	NA	rs223498	0.59	0.59	0.582	0.609824	0.4841	0.503	0.6225	0.8865	0.4663	0.47	0.47	0.6	0.89	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.435835	NA	NA	NA	NA	NA	0.725	NA	3.5159
1300	7	30660938	30660938	A	C	intronic	GARS	NA	NA	NA	intronic	ENSG00000106105	NA	NA	NA	NA	NA	7p14.3	NA	NA	NA	NA	rs10951271	0.36	0.36	0.327	0.319289	0.4841	0.4534	0.464	0.0484	0.2751	0.49	0.4	0.44	0.06	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.244677	NA	NA	NA	NA	NA	0.246	NA	3.5159
1300	17	45131755	45131755	A	G	intergenic	RPRML,CDC27	dist=75141;dist=63556	NA	NA	ncRNA_intronic	ENSG00000262879,ENSG00000263142	NA	NA	NA	NA	NA	17q21.32	NA	NA	NA	NA	rs7220777	0.39	0.39	0.309	0.403155	0.4841	0.3036	0.4741	0.3086	0.5	0.5	0.26	0.47	0.32	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.208979	NA	NA	NA	NA	NA	0.536	NA	3.5159
1300	19	2833576	2833576	G	A	intronic	ZNF554	NA	NA	NA	intronic	ENSG00000172006	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs8107668	0.48	0.48	0.462	0.516573	0.4841	0.5575	0.3948	0.4266	0.7157	0.47	0.56	0.4	0.45	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.540998	NA	NA	NA	NA	NA	0.536	NA	3.5159
1300	19	2833617	2833617	G	A	intronic	ZNF554	NA	NA	NA	intronic	ENSG00000172006	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs8107771	0.48	0.48	0.47	0.516573	0.4841	0.5575	0.3948	0.4266	0.7157	0.47	0.56	0.4	0.45	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.711322	NA	NA	NA	NA	NA	0.536	NA	3.5159
1300	3	125649354	125649354	G	C	intronic	ALG1L	NA	NA	NA	intronic	ENSG00000189366	NA	NA	NA	NA	NA	3q21.2	NA	NA	NA	NA	rs7616044	0.22	0.22	0.243	0.233826	0.172	0.1071	0.1527	0.4841	0.1472	0.17	0.1	0.17	0.49	0.158	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.274377	NA	NA	0.154219	0.395441	NA	0.152	NA	3.515781
1300	15	86199049	86199049	C	G	intronic	AKAP13	NA	NA	NA	ncRNA_intronic	ENSG00000259367	NA	NA	NA	NA	NA	15q25.3	NA	NA	NA	NA	rs17635450	0.16	0.16	0.126	0.136182	0.3022	0.0159	0.2262	0.0113	0.1943	0.31	0.02	0.25	0.01	0.2312	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.346362	NA	NA	0.284202	0.049341	NA	0.225	NA	3.5157313
1300	4	141545397	141545397	A	C	intronic	TBC1D9	NA	NA	NA	intronic	ENSG00000109436	NA	NA	NA	NA	NA	4q31.21	NA	NA	NA	NA	rs2291713	0.22	0.22	0.249	0.252196	0.1521	0.1339	0.1556	0.5197	0.184	0.15	0.1	0.19	0.52	0.1923	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.354425	NA	NA	0.140171	0.448172	ID=COSN167338;OCCURENCE=1(large_intestine)	0.29	NA	3.515429
1300	19	829723	829723	A	G	intronic	AZU1	NA	NA	NA	intronic	ENSG00000172232	NA	NA	NA	Score=547;Name=lod=223	NA	19p13.3	NA	NA	NA	NA	rs678976	0.59	0.59	0.59	0.63139	0.497	0.4851	0.6052	0.8858	0.5951	0.5	0.45	0.57	0.89	0.529	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.332913	NA	NA	0.458721	0.810032	NA	0.667	NA	3.515279
1301	2	228734956	228734956	G	A	intergenic	CCL20,DAW1	dist=52676;dist=1371	NA	NA	ncRNA_exonic	ENSG00000183514	NA	NA	NA	NA	NA	2q36.3	NA	NA	NA	NA	rs12476836	0.48	0.48	0.471	0.5002	0.4851	0.4702	0.647	0.4576	0.5	0.47	0.44	0.62	0.45	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.55241	NA	NA	NA	NA	NA	0.514	NA	3.5149
1301	2	228735140	228735140	T	C	intergenic	CCL20,DAW1	dist=52860;dist=1187	NA	NA	ncRNA_exonic	ENSG00000183514	NA	NA	NA	NA	NA	2q36.3	NA	NA	NA	NA	rs34862621	0.49	0.49	0.461	0.509185	0.4851	0.4702	0.647	0.4917	0.5	0.47	0.44	0.62	0.48	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.261829	NA	NA	NA	NA	NA	0.457	NA	3.5149
1301	2	228735186	228735186	T	C	intergenic	CCL20,DAW1	dist=52906;dist=1141	NA	NA	ncRNA_exonic	ENSG00000183514	NA	NA	NA	NA	NA	2q36.3	NA	NA	NA	NA	rs61343551	0.49	0.49	0.465	0.509185	0.4851	0.4702	0.647	0.4917	0.5	0.47	0.44	0.62	0.48	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.147074	NA	NA	NA	NA	NA	0.507	NA	3.5149
1301	6	33659793	33659793	G	A	intronic	ITPR3	NA	NA	NA	intronic	ENSG00000096433	NA	NA	NA	NA	NA	6p21.31	NA	NA	NA	NA	rs2296742	0.56	0.56	0.516	0.579673	0.4851	0.8998	0.6138	0.2156	0.8149	0.49	0.88	0.62	0.24	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.01617	NA	NA	NA	NA	NA	0.536	NA	3.5149
1301	8	143994944	143994944	T	G	intronic	CYP11B2	NA	NA	NA	intronic	ENSG00000104499,ENSG00000179142	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs13252628	0.35	0.35	0.315	0.328075	0.4851	0.1577	0.3718	0.2829	0.3722	0.5	0.15	0.43	0.31	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.431345	NA	NA	NA	NA	NA	0.391	NA	3.5149
1301	10	72434194	72434194	G	A	intronic	ADAMTS14	NA	NA	NA	intronic	ENSG00000138316	NA	NA	NA	NA	NA	10q22.1	NA	NA	NA	NA	rs614201	0.66	0.66	0.664	0.647764	0.4851	0.8403	0.6427	0.73	0.5092	0.5	0.84	0.64	0.74	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.346351	NA	NA	NA	NA	NA	0.616	NA	3.5149
1301	11	68840014	68840014	G	A	intronic	TPCN2	NA	NA	NA	intronic	ENSG00000162341	NA	NA	NA	NA	NA	11q13.3	NA	NA	NA	NA	rs3750963	0.35	0.35	0.346	0.298323	0.4851	0.2867	0.3141	0.23	0.1994	0.46	0.28	0.35	0.27	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.379903	NA	NA	NA	NA	NA	0.268	NA	3.5149
1301	11	68845867	68845867	G	A	intronic	TPCN2	NA	NA	NA	intronic	ENSG00000162341	NA	NA	NA	NA	NA	11q13.3	NA	NA	NA	NA	rs7945151	0.32	0.32	0.284	0.262979	0.4851	0.2867	0.3069	0.0998	0.1994	0.46	0.28	0.35	0.13	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.236628	NA	NA	NA	NA	NA	0.232	NA	3.5149
1301	20	25196520	25196520	T	A	intronic	ENTPD6	NA	NA	NA	intronic	ENSG00000197586	NA	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	rs11087505	0.64	0.64	0.645	0.631589	0.4851	0.9117	0.3818	0.7345	0.5317	0.49	0.93	0.43	0.71	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.586407	NA	NA	NA	NA	NA	0.558	NA	3.5149
1301	13	25373515	25373515	G	C	intronic	RNF17	NA	NA	NA	intronic	ENSG00000132972	NA	NA	NA	NA	NA	13q12.12	NA	NA	NA	NA	rs12865323	0.16	0.16	0.134	0.139177	0.1382	0.2173	0.2637	0.0061	0.1513	0.15	0.25	0.25	0.01	0.1779	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.038688	2.038688	NA	0.169148	0.032683	NA	0.145	NA	3.514752
1301	12	57926472	57926472	G	A	intronic	DCTN2	NA	NA	NA	intronic	ENSG00000175203	NA	NA	NA	NA	NA	12q13.3	NA	NA	NA	NA	rs703837	0.22	0.22	0.225	0.210863	0.175	0.2768	0.1398	0.2526	0.1738	0.18	0.28	0.14	0.27	0.1694	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.797182	NA	NA	0.140998	0.224527	ID=COSN164288;OCCURENCE=1(NS)	0.21	NA	3.514602
1301	1	70226125	70226125	T	C	intronic	LRRC7	NA	NA	NA	intronic	ENSG00000033122	NA	NA	NA	NA	NA	1p31.1	NA	NA	NA	NA	rs12407496	0.16	0.16	0.151	0.173323	0.168	0.1419	0.1888	0.2141	0.1452	0.15	0.14	0.17	0.2	0.1705	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.784359	NA	NA	0.146922	0.183204	NA	0.275	NA	3.514578
1301	7	141537968	141537968	A	G	intronic	PRSS37	NA	NA	NA	UTR3	ENSG00000165076	ENST00000419085:c.*806T>C	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs11765575	0.38	0.38	0.357	0.376797	0.3012	0.5327	0.4409	0.2648	0.3998	0.31	0.51	0.4	0.29	0.351	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.950694	NA	NA	NA	NA	NA	0.341	NA	3.5144667
1301	6	24416593	24416593	A	G	intronic	MRS2	NA	NA	NA	intronic	ENSG00000124532	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs75878386	0.13	0.13	0.118	0.113219	0.1938	0.1488	0.0965	0.0038	0.1534	0.2	0.16	0.09	0.01	0.1501	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.808095	NA	NA	0.141852	0.028231	NA	0.094	NA	3.514248
1301	19	10418838	10418838	G	A	intronic	ZGLP1	NA	NA	NA	intronic	ENSG00000167807,ENSG00000220201,ENSG00000267673	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs35063123	0.17	0.17	0.156	0.173123	0.1561	0.1964	0.3098	0.0703	0.2086	0.16	0.21	0.25	0.08	0.1831	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.640119	NA	NA	0.146556	0.079557	NA	0.167	NA	3.514244
1301	8	135612595	135612595	A	G	ncRNA_exonic	ZFAT-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000248492	NA	NA	NA	NA	NA	8q24.22	NA	Name=NFKB,PAX5-C20,TCF12,EBF,Pol2-4H8,Oct-2,EBF1_(C-8),RXRA,TAF1,POU2F2,Pol2,IRF4_(M-17)	NA	NA	rs894343	0.79	0.79	0.762	0.783347	0.6918	0.9067	0.8112	0.7632	0.7577	0.7	0.92	0.78	0.76	0.7532	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2457	NA	NA	0.707703	0.780967	NA	0.819	NA	3.5139636
1301	16	2155819	2155819	A	C	intronic	PKD1	NA	NA	NA	intronic	ENSG00000008710	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs28610092	0.21	0.21	0.147	0.21905	0.167	NA	0.1787	0.5446	0.0869	0.17	0.01	0.21	0.51	0.1584	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.116194	NA	NA	0.160692	0.42598	NA	0.072	NA	3.513908
1301	1	204234225	204234225	G	A	intronic	PLEKHA6	NA	NA	NA	intronic	ENSG00000143850	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs4073136	0.5	0.5	0.444	0.464257	0.4861	0.4881	0.5288	0.4781	0.3528	0.49	0.5	0.52	0.49	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.662885	NA	NA	NA	NA	NA	0.5	NA	3.5139
1301	2	242648545	242648545	C	T	intronic	ING5	NA	NA	NA	intronic	ENSG00000168395	NA	NA	NA	NA	NA	2q37.3	NA	NA	NA	NA	rs7595652	0.34	0.34	0.316	0.279553	0.4861	0.1875	0.5086	0.1528	0.1708	0.49	0.18	0.48	0.17	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.675064	NA	NA	NA	NA	NA	0.304	NA	3.5139
1301	2	242648549	242648549	G	A	intronic	ING5	NA	NA	NA	intronic	ENSG00000168395	NA	NA	NA	NA	NA	2q37.3	NA	NA	NA	NA	rs7568408	0.34	0.34	0.314	0.279553	0.4861	0.1875	0.5086	0.1528	0.1708	0.49	0.18	0.48	0.17	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.303953	NA	NA	NA	NA	NA	0.304	NA	3.5139
1301	3	12570572	12570572	C	T	intronic	TSEN2	NA	NA	NA	intronic	ENSG00000154743	NA	NA	NA	NA	NA	3p25.2	NA	NA	NA	NA	rs299632	0.43	0.43	0.453	0.375	0.4861	0.1101	0.3746	0.6437	0.1708	0.5	0.11	0.44	0.66	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.441224	NA	NA	NA	NA	NA	0.486	NA	3.5139
1301	7	56155219	56155219	C	T	intronic	PHKG1	NA	NA	NA	intronic	ENSG00000164776	NA	NA	NA	NA	NA	7p11.2	NA	NA	NA	NA	rs6945795	0.5	0.5	0.493	0.475839	0.4861	0.6627	0.4524	0.3654	0.4387	0.48	0.65	0.48	0.38	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.96317	NA	NA	NA	NA	NA	0.486	NA	3.5139
1301	9	100193113	100193113	T	C	intronic	TDRD7	NA	NA	NA	intronic	ENSG00000196116	NA	NA	NA	NA	NA	9q22.33	NA	NA	NA	NA	rs7874295	0.49	0.49	0.485	0.450679	0.4861	0.4752	0.5677	0.4274	0.3374	0.49	0.5	0.57	0.45	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.915496	NA	NA	NA	NA	ID=COSN168622;OCCURENCE=1(large_intestine)	0.478	NA	3.5139
1301	9	141035901	141035901	A	G	intergenic	CACNA1B,TUBBP5	dist=16825;dist=8664	NA	NA	ncRNA_exonic	ENSG00000229926	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs2509413	0.48	0.48	0.407	0.500399	0.4861	0.3224	0.5965	0.6785	0.3896	0.51	0.26	0.57	0.63	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.148511	NA	NA	NA	NA	NA	0.536	NA	3.5139
1301	16	33424691	33424691	T	C	intergenic	LOC390705,RNU6-76P	dist=125989;dist=38816	NA	NA	ncRNA_intronic	ENSG00000259882	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs2632824	NA	NA	NA	0.489417	0.4861	0.4752	0.4798	0.5045	0.4939	NA	NA	NA	NA	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.757382	NA	NA	NA	NA	NA	0.464	NA	3.5139
1301	18	14378621	14378621	C	T	intergenic	CYP4F35P,CXADRP3	dist=36098;dist=99333	NA	NA	ncRNA_exonic	ENSG00000187589	NA	NA	NA	NA	NA	18p11.21	NA	NA	NA	NA	rs55811695	0.29	0.29	0.248	0.285543	0.4861	0.1141	0.2954	0.1997	0.365	0.47	0.09	0.34	0.21	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.163641	NA	NA	NA	NA	NA	0.232	NA	3.5139
1301	22	43830848	43830848	C	T	intronic	MPPED1	NA	NA	NA	intronic	ENSG00000186732	NA	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs6519374	0.37	0.37	0.386	0.354233	0.4861	0.0823	0.3919	0.4221	0.3804	0.47	0.09	0.43	0.47	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.896267	NA	NA	NA	NA	NA	0.428	NA	3.5139
1301	18	43405792	43405792	T	C	intronic	SIGLEC15	NA	NA	NA	intronic	ENSG00000197046	NA	NA	NA	NA	NA	18q12.3	NA	NA	Name=3	NA	rs1440822	0.53	0.53	0.53	0.488419	0.5	0.5248	0.3818	0.5877	0.3804	0.52	0.55	0.43	0.61	0.4781	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.221823	NA	NA	0.508372	0.57399	NA	0.58	NA	3.513528
1301	17	10231498	10231498	A	C	intronic	MYH13	NA	NA	NA	ncRNA_intronic	ENSG00000264067	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs2277645	0.78	0.78	0.764	0.727037	0.8201	0.9127	0.8256	0.4939	0.6851	0.82	0.9	0.82	0.55	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.185608	NA	NA	NA	NA	NA	0.667	NA	3.5132333
1301	6	125614100	125614100	C	A	intronic	HDDC2	NA	NA	NA	intronic	ENSG00000111906	NA	NA	NA	NA	NA	6q22.31	NA	NA	NA	NA	rs1417701	0.21	0.21	0.233	0.196885	0.161	0.1071	0.1873	0.3858	0.0777	0.15	0.09	0.21	0.45	0.1603	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.045378	NA	NA	0.165728	0.371429	NA	0.203	NA	3.512972
1301	6	162989383	162989383	T	C	intronic	PARK2	NA	NA	NA	intronic	ENSG00000185345	NA	NA	NA	NA	NA	6q26	NA	NA	NA	NA	rs6914377	0.57	0.57	0.554	0.578474	0.4871	0.7143	0.5389	0.5454	0.6053	0.48	0.74	0.54	0.54	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.903153	NA	NA	NA	NA	NA	0.616	NA	3.5129
1301	14	77932111	77932111	A	G	intronic	AHSA1	NA	NA	NA	intronic	ENSG00000100591	NA	NA	NA	NA	NA	14q24.3	NA	NA	NA	NA	rs7146784	0.51	0.51	0.494	0.480831	0.4871	0.9187	0.513	0.0998	0.5153	0.49	0.92	0.45	0.11	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.95319	NA	NA	NA	NA	NA	0.384	NA	3.5129
1301	16	2288224	2288224	G	A	intronic	DNASE1L2	NA	NA	NA	intronic	ENSG00000167968	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs27620	0.51	0.51	0.509	0.502995	0.4871	0.5218	0.3775	0.5166	0.5706	0.5	0.52	0.39	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.674328	NA	NA	NA	NA	NA	0.442	NA	3.5129
1301	17	20768867	20768867	A	C	intronic	CCDC144NL	NA	NA	NA	intronic	ENSG00000205212	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs9906896	NA	NA	0.281	0.0461262	0.001	NA	0.0086	0.1664	0.0041	NA	NA	NA	NA	0.4861	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.358148	NA	NA	NA	NA	NA	NA	NA	3.5129
1301	22	35741863	35741863	A	G	intronic	TOM1	NA	NA	NA	intronic	ENSG00000100284	NA	NA	NA	NA	NA	22q12.3	NA	NA	NA	NA	rs133399	0.7	0.7	0.707	0.688498	0.4871	0.745	0.696	0.972	0.4489	0.51	0.74	0.67	0.96	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.381149	NA	NA	NA	NA	NA	0.826	NA	3.5129
1301	8	82727520	82727520	A	T	intronic	SNX16	NA	NA	NA	ncRNA_intronic	ENSG00000253334	NA	NA	NA	NA	NA	8q21.13	NA	NA	NA	NA	rs2600606	0.27	0.27	0.257	0.28155	0.2664	0.377	0.3184	0.1029	0.4141	0.28	0.37	0.31	0.13	0.2988	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.196415	3.196415	NA	0.255349	0.142987	NA	0.21	NA	3.5127843
1301	7	104742054	104742054	C	T	intronic	MLL5	NA	NA	NA	intronic	ENSG00000005483	NA	NA	NA	NA	NA	7q22.3	NA	NA	NA	NA	rs11976329	0.38	0.38	0.441	0.367412	0.1322	0.5575	0.2435	0.5991	0.1881	0.12	0.63	0.25	0.6	0.2332	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.775755	3.775755	NA	0.122238	0.527475	NA	0.413	NA	3.512362
1301	21	28572980	28572980	C	T	intergenic	ADAMTS5,MIR5009	dist=233541;dist=86842	NA	NA	intergenic	ENSG00000215326,ENSG00000231236	dist=56712;dist=158224	NA	NA	Score=289;Name=lod=20	NA	21q21.3	NA	NA	NA	NA	rs2830768	0.84	0.84	0.848	0.834864	0.8211	0.7976	0.8588	0.882	0.8067	0.81	0.81	0.85	0.89	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.234353	NA	NA	NA	NA	NA	0.862	NA	3.5122334
1301	2	97808495	97808495	C	T	intronic	ANKRD36	NA	NA	NA	intronic	ENSG00000135976	NA	NA	NA	NA	NA	2q11.2	NA	NA	NA	NA	rs62153045	NA	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4878	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.175755	NA	NA	NA	NA	NA	NA	NA	3.5122
1301	9	139820421	139820421	G	A	UTR3	TRAF2	NM_021138:c.*68G>A	NA	NA	UTR3	ENSG00000127191	ENST00000536468:c.*68G>A,ENST00000247668:c.*68G>A,ENST00000359662:c.*68G>A	NA	NA	NA	NA	9q34.3	NA	Name=CTCF,CTCF_(SC-5916)	NA	NA	rs7852970	0.59	0.59	0.616	0.59385	0.6213	0.7123	0.4251	0.531	0.6483	0.62	0.73	0.45	0.5	0.6199	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.588956	NA	NA	0.57994	0.511429	NA	0.638	NA	3.5121934
1301	1	8415235	8415235	C	T	intronic	RERE	NA	NA	NA	intronic	ENSG00000142599	NA	NA	NA	NA	NA	1p36.23	NA	NA	NA	NA	rs1889854	0.16	0.16	0.158	0.13738	0.2515	0.1141	0.1686	0.0265	0.1718	0.25	0.12	0.2	0.03	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.804027	NA	NA	0.236329	0.067197	NA	0.145	NA	3.512171
1301	13	28270611	28270611	C	T	intergenic	POLR1D,GSX1	dist=29052;dist=96169	NA	NA	ncRNA_exonic	ENSG00000226703	NA	NA	NA	NA	NA	13q12.2	NA	NA	NA	NA	rs9319387	0.43	0.43	0.37	0.386382	0.4881	0.5119	0.6239	0.1104	0.3569	0.49	0.51	0.59	0.11	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.724431	NA	NA	NA	NA	NA	0.449	NA	3.5119
1301	1	16352492	16352492	G	A	intronic	CLCNKA	NA	NA	NA	intronic	ENSG00000186510	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs11584665	0.57	0.57	0.534	0.598243	0.4881	0.7619	0.4035	0.6717	0.5818	0.47	0.73	0.41	0.67	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.858173	NA	NA	NA	NA	NA	0.601	NA	3.5119
1301	9	136211248	136211248	A	G	intronic	MED22	NA	NA	NA	intronic	ENSG00000148297	NA	NA	NA	NA	NA	9q34.2	NA	NA	NA	NA	rs9645009	0.39	0.39	0.372	0.405751	0.4881	0.3145	0.4251	0.3396	0.4908	0.5	0.29	0.41	0.34	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.044832	NA	NA	NA	NA	NA	0.297	NA	3.5119
1301	14	88411837	88411837	G	A	intronic	GALC	NA	NA	NA	intronic	ENSG00000054983	NA	NA	NA	NA	NA	14q31.3	NA	NA	NA	NA	rs366615	0.43	0.43	0.43	0.447684	0.4881	0.2312	0.379	0.646	0.41	0.47	0.22	0.4	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.218133	NA	NA	NA	NA	NA	0.42	NA	3.5119
1301	9	131027982	131027982	G	C	intronic	GOLGA2	NA	NA	NA	intronic	ENSG00000167110	NA	NA	NA	NA	NA	9q34.11	NA	NA	NA	NA	rs7871866	0.16	0.16	0.144	0.174521	0.163	0.1885	0.1268	0.1369	0.2566	0.16	0.21	0.14	0.12	0.1698	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.029483	NA	NA	0.155349	0.131698	NA	0.188	NA	3.511851
1301	3	158539486	158539486	A	G	intronic	MFSD1	NA	NA	NA	intronic	ENSG00000118855	NA	NA	NA	NA	NA	3q25.32	NA	NA	NA	NA	rs1548093	0.16	0.16	0.171	0.182907	0.166	0.0337	0.1326	0.3018	0.229	0.16	0.03	0.17	0.3	0.1608	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.199176	NA	NA	0.161501	0.260302	NA	0.152	NA	3.511699
1301	7	142168819	142168819	G	A	intergenic	LOC730441,MTRNR2L6	dist=196751;dist=205312	NA	NA	exonic	ENSG00000230099	NA	nonsynonymous SNV	ENSG00000230099:ENST00000454561:exon1:c.C26T:p.A9V	NA	NA	7q34	NA	NA	NA	NA	rs361350	0.55	0.55	0.594	0.608027	0.6918	0.7282	0.5504	0.4728	0.6217	0.6	0.67	0.49	0.4	0.6299	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.321867	NA	1	NA	NA	NA	0.529	NA	3.5116334
1301	12	6060960	6060960	G	A	intronic	VWF	NA	NA	NA	intronic	ENSG00000110799	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs2270151	0.14	0.14	0.119	0.116813	0.1849	0.1815	0.1095	0.0401	0.089	0.19	0.17	0.13	0.05	0.1351	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.139361	NA	NA	0.168372	0.085111	NA	0.072	NA	3.511628
1301	15	81637284	81637284	G	A	exonic	TMC3	NA	synonymous SNV	TMC3:NM_001080532:exon13:c.C1341T:p.A447A	exonic	ENSG00000188869	NA	synonymous SNV	ENSG00000188869:ENST00000359440:exon13:c.C1341T:p.A447A,ENSG00000188869:ENST00000558726:exon13:c.C1344T:p.A448A	NA	NA	15q25.1	NA	NA	NA	NA	rs4278705	0.54	0.54	0.527	0.464657	0.7396	0.4504	0.6023	0.2451	0.3957	0.74	0.44	0.67	0.26	0.6578	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.122446	NA	NA	0.757682	0.333682	NA	0.406	NA	3.5115846
1301	8	82727515	82727515	C	T	intronic	SNX16	NA	NA	NA	ncRNA_intronic	ENSG00000253334	NA	NA	NA	NA	NA	8q21.13	NA	NA	NA	NA	rs2635482	0.27	0.27	0.265	0.28155	0.2664	0.377	0.3184	0.1029	0.4141	0.28	0.37	0.31	0.13	0.297	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.260992	1.260992	NA	0.258372	0.144576	NA	0.21	NA	3.5115613
1301	16	85953682	85953682	G	C	intronic	IRF8	NA	NA	NA	intronic	ENSG00000140968	NA	NA	NA	NA	NA	16q24.1	NA	NA	NA	NA	rs16940005	0.14	0.14	0.119	0.120407	0.17	0.2133	0.1081	0.0166	0.1227	0.16	0.2	0.15	0.01	0.1552	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.022542	NA	NA	0.163256	0.038444	NA	0.167	NA	3.511544
1301	19	33687750	33687750	C	T	intronic	LRP3	NA	NA	NA	intronic	ENSG00000130881	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs3760890	0.29	0.29	0.278	0.333067	0.2465	0.4623	0.2522	0.1997	0.5266	0.25	0.47	0.26	0.17	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.457161	1.457161	NA	0.241986	0.187139	NA	0.297	NA	3.511514
1301	14	101506555	101506555	A	G	upstream;downstream	MIR376A1,MIR376B,MIR654;MIR376A2,MIR376C	NA	NA	NA	upstream;downstream	ENSG00000207934,ENSG00000264882;ENSG00000265032,ENSG00000271946	NA	NA	NA	NA	NA	14q32.31	NA	NA	NA	NA	rs76847254	0.02	0.02	0.024	0.0139776	0.0497	NA	0.0072	0.0015	0.0133	0.05	NA	0.01	0.0041	0.049	0.057	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.494671	NA	NA	0.056548	0.011494	NA	0.087	NA	3.5114186
1301	17	48263903	48263903	A	G	intronic	COL1A1	NA	NA	NA	intronic	ENSG00000108821	NA	NA	NA	NA	NA	17q21.33	NA	NA	NA	NA	rs2277632	0.23	0.23	0.227	0.248203	0.1581	0.378	0.0793	0.3033	0.2526	0.15	0.36	0.09	0.3	0.1874	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.798003	NA	NA	0.143488	0.288697	NA	0.239	NA	3.511012
1301	1	192780498	192780498	A	G	intronic	RGS2	NA	NA	NA	intronic	ENSG00000116741	NA	NA	NA	NA	NA	1q31.2	NA	NA	NA	NA	rs17647363	0.09	0.09	0.085	0.0800719	0.1809	0.0575	0.1196	0.0098	0.0665	0.16	0.05	0.14	NA	0.1246	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.033549	NA	NA	0.183597	0.033135	NA	0.152	NA	3.510903
1301	4	103911159	103911159	A	C	intronic	SLC9B1	NA	NA	NA	intronic	ENSG00000164037	NA	NA	NA	NA	NA	4q24	NA	NA	NA	NA	rs7672319	0.56	0.56	0.545	0.560903	0.4891	0.5129	0.5533	0.7163	0.4796	0.48	0.5	0.56	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.19527	NA	NA	NA	NA	NA	0.63	NA	3.5109
1301	12	96354455	96354455	G	C	intronic	AMDHD1	NA	NA	NA	intronic	ENSG00000139344	NA	NA	NA	NA	NA	12q23.1	NA	NA	NA	NA	rs2043608	0.56	0.56	0.574	0.56849	0.4891	0.5119	0.6297	0.6982	0.4898	0.48	0.55	0.59	0.68	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.841834	NA	NA	NA	NA	NA	0.58	NA	3.5109
1301	12	96356060	96356060	G	A	intronic	AMDHD1	NA	NA	NA	intronic	ENSG00000139344	NA	NA	NA	NA	NA	12q23.1	NA	NA	NA	NA	rs3751265	0.56	0.56	NA	0.568291	0.4891	0.5109	0.6297	0.6982	0.4898	0.48	0.55	0.59	0.68	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.835708	NA	NA	NA	NA	NA	0.594	NA	3.5109
1301	14	89202569	89202569	C	T	intronic	EML5	NA	NA	NA	intronic	ENSG00000165521	NA	NA	NA	NA	NA	14q31.3	NA	NA	NA	NA	rs8003018	0.73	0.73	0.698	0.758387	0.4891	0.9325	0.683	0.9123	0.7014	0.49	0.94	0.69	0.9	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.561964	NA	NA	NA	NA	NA	0.696	NA	3.5109
1301	15	65108652	65108652	T	C	intronic	PIF1	NA	NA	NA	intronic	ENSG00000140451	NA	NA	NA	NA	NA	15q22.31	NA	NA	NA	NA	rs6494498	0.3	0.3	0.301	0.277556	0.4891	0.1111	0.2608	0.2602	0.2669	0.49	0.08	0.3	0.29	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.493893	NA	NA	NA	NA	NA	0.413	NA	3.5109
1301	17	20872949	20872949	T	C	intergenic	CCDC144NL,USP22	dist=73496;dist=29957	NA	NA	ncRNA_intronic	ENSG00000233098,ENSG00000264660	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs11651632	0.51	0.51	0.479	0.539736	0.4891	0.4722	0.402	0.6339	0.6319	0.49	0.51	0.39	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.24169	NA	NA	NA	NA	NA	0.304	NA	3.5109
1301	17	67109673	67109673	A	G	intronic	ABCA6	NA	NA	NA	intronic	ENSG00000154262	NA	NA	NA	NA	NA	17q24.3	NA	NA	NA	NA	rs7504026	0.35	0.35	0.302	0.371805	0.4891	0.3423	0.4683	0.1452	0.5194	0.49	0.29	0.44	0.14	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.595042	NA	NA	NA	NA	NA	0.355	NA	3.5109
1301	19	46664168	46664168	G	A	intronic	IGFL2	NA	NA	NA	ncRNA_intronic	ENSG00000267922	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs2270403	0.23	0.23	0.198	0.228035	0.2813	0.1766	0.2579	0.152	0.3078	0.3	0.18	0.25	0.17	0.2651	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.493736	NA	NA	0.276495	0.183689	NA	0.312	NA	3.5104383
1301	6	125614121	125614121	C	A	intronic	HDDC2	NA	NA	NA	intronic	ENSG00000111906	NA	NA	NA	NA	NA	6q22.31	NA	NA	NA	NA	rs1417700	0.21	0.21	0.221	0.196885	0.161	0.1071	0.1873	0.3858	0.0777	0.15	0.09	0.21	0.45	0.1655	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.06678	NA	NA	0.163105	0.37211	NA	0.203	NA	3.510395
1301	9	33395039	33395039	C	T	intronic	AQP7	NA	NA	NA	intronic	ENSG00000165269	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs72707431	NA	NA	0.343	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.49	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.178162	NA	NA	NA	NA	NA	0.42	NA	3.51
1301	13	114542858	114542858	G	A	ncRNA_intronic	GAS6-AS1	NA	NA	NA	intronic	ENSG00000183087	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs9604573	0.26	0.26	0.235	0.291334	0.2853	0.244	0.2637	0.2564	0.4131	0.28	0.25	0.27	0.24	0.2733	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.004969	NA	NA	0.264767	0.242851	NA	0.275	NA	3.5099663
1301	2	101022886	101022886	C	T	intronic	CHST10	NA	NA	NA	intronic	ENSG00000115526	NA	NA	NA	NA	NA	2q11.2	NA	NA	NA	NA	rs4149512	0.45	0.45	0.393	0.38778	0.4901	0.7183	0.4524	0.0991	0.2863	0.49	0.72	0.43	0.09	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.794398	NA	NA	NA	NA	NA	0.355	NA	3.5099
1301	6	1742908	1742908	C	G	intronic	GMDS	NA	NA	NA	intronic	ENSG00000112699	NA	NA	NA	NA	NA	6p25.3	NA	NA	NA	NA	rs3734740	0.48	0.48	0.478	0.487021	0.4901	0.6617	0.4726	0.2867	0.5849	0.49	0.64	0.48	0.29	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.950128	NA	NA	NA	NA	NA	0.486	NA	3.5099
1301	6	41753380	41753380	G	T	intronic	PRICKLE4	NA	NA	NA	intronic	ENSG00000124593,ENSG00000137218	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs3747753	0.54	0.54	0.51	0.548922	0.4901	0.5387	0.6787	0.5166	0.5716	0.49	0.56	0.65	0.5	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.111776	NA	NA	NA	NA	NA	0.5	NA	3.5099
1301	10	38385441	38385441	G	A	intronic	ZNF37A	NA	NA	NA	intronic	ENSG00000075407	NA	NA	NA	NA	NA	10p11.1	NA	NA	NA	NA	rs2474573	0.5	0.5	0.517	0.46865	0.4901	0.5585	0.513	0.4939	0.2883	0.5	0.53	0.5	0.47	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.622268	NA	NA	NA	NA	NA	0.507	NA	3.5099
1301	14	77914752	77914752	A	G	intronic	VIPAS39	NA	NA	NA	intronic	ENSG00000151445	NA	NA	NA	NA	NA	14q24.3	NA	NA	NA	NA	rs2091916	0.51	0.51	0.492	0.474441	0.4901	0.9216	0.5144	0.0688	0.5174	0.49	0.93	0.46	0.08	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.140337	NA	NA	NA	NA	NA	0.377	NA	3.5099
1301	15	93482656	93482656	G	A	intronic	CHD2	NA	NA	NA	intronic	ENSG00000173575	NA	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs3743469	0.54	0.54	0.504	0.545128	0.4901	0.8542	0.536	0.2814	0.6462	0.5	0.83	0.53	0.28	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.069136	NA	NA	NA	NA	NA	0.428	NA	3.5099
1301	2	184024190	184024190	A	G	intronic	NUP35	NA	NA	NA	intronic	ENSG00000163002	NA	NA	NA	NA	NA	2q32.1	NA	NA	NA	NA	rs3748884	0.21	0.21	0.209	0.194688	0.1481	0.1171	0.1268	0.3608	0.1462	0.16	0.13	0.16	0.4	0.1752	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.455632	1.455632	NA	0.167209	0.322434	NA	0.217	NA	3.509491
1301	7	1478644	1478644	G	A	intronic	MICALL2	NA	NA	NA	intronic	ENSG00000164877	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs4307249	0.17	0.17	0.141	0.16853	0.1362	0.0288	0.281	0.2723	0.1258	0.14	0.04	0.28	0.27	0.1937	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.046569	NA	NA	0.160735	0.252521	NA	0.21	NA	3.509365
1301	4	113278172	113278172	A	C	intronic	ALPK1	NA	NA	NA	ncRNA_exonic	ENSG00000251441	NA	NA	NA	NA	NA	4q25	NA	NA	NA	NA	rs4834266	0.84	0.84	0.845	0.840256	0.8241	0.8849	0.8473	0.8328	0.816	0.83	0.88	0.87	0.81	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.193671	NA	NA	NA	NA	NA	0.804	NA	3.5092333
1301	6	33651975	33651975	C	G	intronic	ITPR3	NA	NA	NA	intronic	ENSG00000096433	NA	NA	NA	NA	NA	6p21.31	NA	NA	NA	NA	rs35095444	0.09	0.09	0.087	0.0702875	0.1809	0.0159	0.1196	0.0129	0.0552	0.19	0.02	0.11	0.02	0.1322	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.064062	NA	NA	0.177674	0.034044	NA	0.08	NA	3.509226
1301	6	31322470	31322470	C	G	intronic	HLA-B	NA	NA	NA	intronic	ENSG00000234745	NA	NA	NA	NA	NA	6p21.33	NA	Name=Pol2,Pol2-4H8	Name=4	NA	rs2442717	0.85	0.85	0.845	0.872204	0.831	0.8165	0.8862	0.9085	0.9131	0.82	0.81	0.9	0.89	0.8466	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.004118	NA	NA	0.813256	0.878575	NA	0.862	NA	3.509144
1301	7	95019355	95019355	G	A	intronic	PON3	NA	NA	NA	intronic	ENSG00000005421,ENSG00000105852	NA	NA	NA	NA	NA	7q21.3	NA	NA	NA	NA	rs6977389	0.59	0.59	0.577	0.622204	0.4911	0.7569	0.6643	0.5439	0.6943	0.47	0.76	0.63	0.56	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.033334	NA	NA	NA	NA	NA	0.507	NA	3.5089
1301	12	9571599	9571599	C	A	ncRNA_intronic	DDX12P	NA	NA	NA	ncRNA_intronic	ENSG00000214826	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs73242993	0.59	0.59	0.554	0.508387	0.5805	0.5744	0.6311	0.326	0.5256	0.63	0.58	0.63	0.49	0.5773	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.501382	NA	NA	NA	NA	NA	0.428	NA	3.5088666
1301	11	134214380	134214380	C	T	intronic	GLB1L2	NA	NA	NA	intronic	ENSG00000149328	NA	NA	NA	NA	NA	11q25	NA	NA	NA	NA	rs111433290	0.2	0.2	0.208	0.208267	0.1521	0.0813	0.1542	0.3699	0.2168	0.17	0.09	0.22	0.37	0.1898	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.32699	NA	NA	0.14929	0.325227	NA	0.181	NA	3.50881
1301	8	100999637	100999637	G	A	intronic	RGS22	NA	NA	NA	intronic	ENSG00000132554	NA	NA	NA	NA	NA	8q22.2	NA	NA	NA	NA	rs28758904	0.15	0.15	0.134	0.170527	0.162	0.0694	0.1398	0.2133	0.2474	0.16	0.08	0.15	0.23	0.1689	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.975755	2.975755	NA	0.160407	0.200826	NA	0.123	NA	3.508693
1301	5	1321873	1321873	C	T	intronic	CLPTM1L	NA	NA	NA	intronic	ENSG00000049656	NA	NA	NA	NA	NA	5p15.33	NA	NA	NA	NA	rs10073340	0.13	0.13	0.128	0.117812	0.171	0.0536	0.134	0.149	0.0757	0.19	0.04	0.14	0.13	0.1468	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.189196	NA	NA	0.173605	0.151611	NA	0.087	NA	3.508595
1301	2	29202580	29202580	G	A	intergenic	WDR43,FAM179A	dist=31500;dist=1584	NA	NA	intronic	ENSG00000189350	NA	NA	NA	NA	NA	2p23.2	NA	NA	NA	NA	rs72857416	0.2	0.2	0.188	0.208267	0.1581	0.1746	0.1801	0.2799	0.2178	0.17	0.17	0.19	0.27	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.037427	NA	NA	NA	NA	NA	0.167	NA	3.5085667
1301	16	84449206	84449206	T	C	intronic	ATP2C2	NA	NA	NA	intronic	ENSG00000064270	NA	NA	NA	NA	NA	16q24.1	NA	NA	NA	NA	rs3826145	0.14	0.14	0.122	0.155351	0.1759	0.0248	0.2075	0.1475	0.2423	0.17	0.03	0.22	0.17	0.1583	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.211075	NA	NA	0.157463	0.134469	NA	0.225	NA	3.508337
1301	16	84224805	84224805	G	C	UTR5	ADAD2	NM_001145400:c.-32G>C,NM_139174:c.-32G>C	NA	NA	UTR5	ENSG00000140955	ENST00000268624:c.-32G>C,ENST00000315906:c.-32G>C	NA	NA	NA	NA	16q24.1	NA	Name=IRF1,SP1,E2F6,E2F6_(H-50),NF-YA,ZBTB33,CHD2_(N-1250),NF-YB	NA	NA	rs8044351	0.67	0.67	0.686	0.661941	0.6064	0.5744	0.6599	0.8805	0.5153	0.61	0.6	0.62	0.89	0.6051	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.560237	NA	NA	0.613582	0.829752	NA	0.652	NA	3.5082514
1301	5	225768	225768	G	C	intronic	SDHA	NA	NA	NA	intronic	ENSG00000073578	NA	NA	NA	NA	NA	5p15.33	NA	NA	NA	NA	rs12520059	0.33	0.33	0.323	0.329273	0.492	0.2768	0.3329	0.0885	0.5389	0.5	0.29	0.33	0.1	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.388768	NA	NA	NA	NA	NA	0.333	NA	3.508
1301	5	70763088	70763088	A	G	intronic	BDP1	NA	NA	NA	intronic	ENSG00000145734	NA	NA	NA	NA	NA	5q13.2	NA	NA	NA	NA	rs7442961	0.42	0.42	0.414	0.439097	0.492	0.378	0.3444	0.4092	0.5552	0.5	0.39	0.35	0.39	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.263106	NA	NA	NA	NA	NA	0.377	NA	3.508
1301	5	70840433	70840433	A	G	intronic	BDP1	NA	NA	NA	intronic	ENSG00000145734	NA	NA	NA	NA	NA	5q13.2	NA	NA	NA	NA	rs279290	0.44	0.44	0.385	0.45627	0.492	0.379	0.3487	0.4713	0.5552	0.5	0.39	0.35	0.46	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.580601	NA	NA	NA	NA	NA	0.413	NA	3.508
1301	6	87439714	87439714	A	C	intergenic	SNHG5,HTR1E	dist=1051263;dist=207310	NA	NA	ncRNA_exonic	ENSG00000218561	NA	NA	NA	NA	NA	6q14.3	NA	NA	NA	NA	rs1325181	0.44	0.44	0.388	0.403954	0.492	0.6448	0.5303	0.0499	0.454	0.49	0.67	0.5	0.06	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.03985	NA	NA	NA	NA	NA	0.449	NA	3.508
1301	16	5128995	5128995	C	T	intronic	ALG1	NA	NA	NA	intronic	ENSG00000033011	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs1846689	0.5	0.5	0.476	0.542332	0.492	0.629	0.4193	0.475	0.683	0.48	0.61	0.41	0.46	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.38825	2.38825	NA	NA	NA	NA	0.428	NA	3.508
1301	20	25479058	25479058	A	G	intronic	NINL	NA	NA	NA	intronic	ENSG00000101004	NA	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	rs400357	0.67	0.67	0.679	0.638578	0.492	0.9772	0.4063	0.7027	0.5184	0.49	0.98	0.42	0.74	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.043251	NA	NA	NA	NA	NA	0.543	NA	3.508
1301	6	31323409	31323409	T	C	intronic	HLA-B	NA	NA	NA	intronic	ENSG00000234745	NA	NA	NA	NA	NA	6p21.33	NA	Name=USF-1,Pol2-4H8,Pol2	Name=3	NA	rs2523605	0.85	0.85	0.856	0.872604	0.831	0.8185	0.8862	0.9085	0.9131	0.82	0.81	0.9	0.89	0.8467	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.197789	NA	NA	0.814419	0.878802	NA	0.884	NA	3.507881
1301	1	236180580	236180580	C	G	intronic	NID1	NA	NA	NA	intronic	ENSG00000116962	NA	NA	NA	NA	NA	1q42.3	NA	NA	NA	NA	rs3768081	0.36	0.36	0.296	0.404353	0.1093	0.6706	0.4366	0.3585	0.4724	0.1	0.69	0.36	0.36	0.2681	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.001054	NA	NA	0.115349	0.331366	NA	0.297	NA	3.507251
1301	9	130287287	130287287	C	A	intronic	FAM129B	NA	NA	NA	intronic	ENSG00000136830	NA	NA	NA	NA	NA	9q33.3	NA	NA	NA	NA	rs3765602	0.13	0.13	0.118	0.117013	0.165	0.0536	0.1441	0.1157	0.1155	0.15	0.08	0.18	0.11	0.142	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.760558	NA	NA	0.185814	0.115297	NA	0.101	NA	3.507186
1301	5	176471591	176471591	C	T	intronic	ZNF346	NA	NA	NA	intronic	ENSG00000113761	NA	NA	NA	NA	NA	5q35.2	NA	NA	NA	NA	rs149307	0.57	0.57	0.594	0.586462	0.493	0.4871	0.4424	0.8752	0.4969	0.5	0.48	0.42	0.89	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.821885	NA	NA	NA	NA	NA	0.572	NA	3.507
1301	17	42334950	42334950	T	C	intronic	SLC4A1	NA	NA	NA	intronic	ENSG00000004939	NA	NA	NA	NA	NA	17q21.31	NA	NA	NA	NA	rs2252501	0.14	0.14	0.139	0.147165	0.173	0.001	0.1138	0.2927	0.0982	0.16	NA	0.13	0.29	0.154	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.008234	NA	NA	0.166163	0.278711	NA	0.123	NA	3.506837
1301	10	11978499	11978499	T	G	intronic	UPF2	NA	NA	NA	intronic	ENSG00000151461	NA	NA	NA	NA	NA	10p14	NA	Name=SP1	NA	NA	rs7921794	0.69	0.69	0.689	0.708267	0.4702	0.8442	0.6988	0.826	0.6605	0.47	0.85	0.68	0.83	0.563	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.005402	NA	NA	0.460233	0.784839	NA	0.514	NA	3.506567
1301	21	47769134	47769134	A	T	intronic	PCNT	NA	NA	NA	intronic	ENSG00000160299	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs35210219	0.26	0.26	0.277	0.313099	0.1521	0.2063	0.2435	0.5575	0.3078	0.15	0.22	0.19	0.53	0.2034	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.058238	NA	NA	0.138023	0.481162	NA	0.304	NA	3.506477
1301	1	111857276	111857276	T	C	intronic	CHIA	NA	NA	NA	intronic	ENSG00000134216	NA	NA	NA	NA	NA	1p13.2	NA	NA	NA	NA	rs41391244	0.17	0.17	0.159	0.195887	0.2366	0.1161	0.1484	0.2201	0.2372	0.22	0.09	0.16	0.2	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.174753	NA	NA	0.257385	0.21604	NA	0.319	NA	3.506015
1301	2	55473371	55473371	A	G	intronic	MTIF2	NA	NA	NA	intronic	ENSG00000085760	NA	NA	NA	NA	NA	2p16.1	NA	NA	NA	NA	rs2576724	0.4	0.4	0.353	0.334864	0.494	0.5228	0.4179	0.0189	0.3456	0.51	0.56	0.44	0.03	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.930626	NA	NA	NA	NA	NA	0.275	NA	3.506
1301	6	17825888	17825888	T	C	intronic	KIF13A	NA	NA	NA	intronic	ENSG00000137177	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs7771879	0.43	0.43	0.401	0.448682	0.494	0.4097	0.5173	0.3366	0.545	0.49	0.4	0.48	0.34	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.164528	NA	NA	NA	NA	NA	0.565	NA	3.506
1301	6	38084569	38084569	C	A	intronic	ZFAND3	NA	NA	NA	intronic	ENSG00000156639	NA	NA	NA	NA	NA	6p21.2	NA	NA	NA	NA	rs2295791	0.38	0.38	0.355	0.352835	0.494	0.1687	0.3905	0.3979	0.3098	0.5	0.15	0.42	0.41	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.161953	NA	NA	NA	NA	NA	0.362	NA	3.506
1301	17	75484700	75484700	A	G	intronic	SEPT9	NA	NA	NA	intronic	ENSG00000184640	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs378578	0.58	0.58	0.637	0.582268	0.494	0.5179	0.4222	0.8699	0.4642	0.48	0.53	0.46	0.88	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.72392	NA	NA	NA	NA	NA	0.551	NA	3.506
1301	22	45754517	45754517	G	T	intronic	SMC1B	NA	NA	NA	intronic	ENSG00000077935	NA	NA	NA	NA	NA	22q13.31	NA	NA	NA	NA	rs5764701	0.35	0.35	0.324	0.289936	0.494	0.2986	0.4697	0.0477	0.271	0.51	0.34	0.43	0.07	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.237735	NA	NA	NA	NA	NA	0.196	NA	3.506
1301	1	19549343	19549343	G	C	intronic	EMC1	NA	NA	NA	ncRNA_intronic	ENSG00000230424	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs2073106	0.35	0.35	0.327	0.333466	0.2664	0.6815	0.2939	0.1346	0.3405	0.25	0.71	0.26	0.14	0.3081	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.86117	3.86117	NA	0.253023	0.152746	NA	0.196	NA	3.5058103
1301	1	9642329	9642329	C	T	intronic	SLC25A33	NA	NA	NA	intronic	ENSG00000171612	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs56026893	0.18	0.18	0.179	0.172125	0.172	0.2867	0.0922	0.1301	0.1677	0.18	0.27	0.09	0.14	0.1612	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.260011	NA	NA	0.161047	0.114163	NA	0.348	NA	3.505753
1301	14	74972942	74972942	G	A	intronic	LTBP2	NA	NA	NA	intronic	ENSG00000119681	NA	NA	NA	NA	NA	14q24.3	NA	NA	NA	NA	rs2286411	0.15	0.15	0.139	0.169728	0.172	0.1528	0.2032	0.0749	0.2894	0.18	0.16	0.18	0.07	0.1673	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.811272	NA	NA	0.154956	0.097821	NA	0.145	NA	3.505744
1301	11	128634760	128634760	C	T	intronic	FLI1	NA	NA	NA	intronic	ENSG00000151702	NA	NA	NA	NA	NA	11q24.3	NA	NA	NA	NA	rs74400777	0.11	0.11	0.101	0.0982428	0.174	0.0933	0.0965	0.0348	0.1125	0.16	0.09	0.12	0.04	0.1501	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.05356	NA	NA	0.170197	0.053837	NA	0.087	NA	3.505703
1301	10	68139142	68139142	G	A	intronic	CTNNA3	NA	NA	NA	intronic	ENSG00000183230	NA	NA	NA	NA	NA	10q21.3	NA	NA	NA	NA	rs12761828	0.09	0.09	0.093	0.0940495	0.1511	0.0506	0.1023	0.0136	0.183	0.15	0.07	0.12	0.02	0.1588	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.086558	NA	NA	0.184535	0.034498	NA	0.167	NA	3.505565
1301	12	52681533	52681533	T	C	intronic	KRT81	NA	NA	NA	intronic	ENSG00000170442,ENSG00000205426	NA	NA	NA	NA	NA	12q13.13	NA	Name=Pol2	NA	NA	rs7300941	0.41	0.41	0.414	0.420527	0.5169	0.1577	0.3761	0.5688	0.4233	0.51	0.16	0.38	0.59	0.4637	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.841792	NA	NA	0.513837	0.580345	ID=COSN164253;OCCURENCE=1(breast)	0.5	NA	3.505563
1301	17	79389411	79389411	C	T	intronic	BAHCC1	NA	NA	NA	intronic	ENSG00000171282	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs11655888	0.08	0.08	0.058	0.0613019	0.1849	0.001	0.0951	0.003	0.0511	0.18	NA	0.12	0.01	0.1384	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.086905	NA	NA	0.171373	0.034306	NA	0.051	NA	3.505327
1301	6	3015790	3015790	A	G	exonic	NQO2	NA	synonymous SNV	NQO2:NM_000904:exon5:c.A330G:p.P110P	exonic	ENSG00000124588	NA	synonymous SNV	ENSG00000124588:ENST00000380430:exon5:c.A330G:p.P110P,ENSG00000124588:ENST00000380455:exon5:c.A330G:p.P110P,ENSG00000124588:ENST00000380472:exon6:c.A330G:p.P110P,ENSG00000124588:ENST00000397717:exon6:c.A330G:p.P110P,ENSG00000124588:ENST00000338130:exon8:c.A330G:p.P110P	NA	NA	6p25.2	NA	NA	NA	NA	rs1049115	0.76	0.76	0.775	0.757388	0.7147	0.6538	0.7334	0.9312	0.6902	0.73	0.67	0.73	0.94	0.7283	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.120445	NA	NA	0.718372	0.899001	NA	0.79	NA	3.5052946
1301	17	16068506	16068506	T	C	intronic	NCOR1	NA	NA	NA	intronic	ENSG00000141027	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs201765279	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4948	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.711594	NA	NA	NA	NA	NA	NA	NA	3.5052
1301	5	79375724	79375724	G	C	intronic	THBS4	NA	NA	NA	ncRNA_intronic	ENSG00000249825	NA	NA	NA	NA	NA	5q14.1	NA	NA	NA	NA	rs2288395	0.36	0.36	0.329	0.391174	0.2783	0.4147	0.3948	0.4652	0.3804	0.27	0.4	0.36	0.47	0.3111	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.427349	NA	NA	0.238837	0.431457	NA	0.232	NA	3.5050963
1302	1	235715601	235715601	A	G	intronic	GNG4	NA	NA	NA	intronic	ENSG00000168243	NA	NA	NA	NA	NA	1q42.3	NA	NA	NA	NA	rs400948	0.61	0.61	0.564	0.623802	0.495	0.8383	0.6556	0.5635	0.5941	0.51	0.81	0.59	0.55	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.15132	NA	NA	NA	NA	NA	0.71	NA	3.505
1302	5	137342589	137342589	T	C	intronic	FAM13B	NA	NA	NA	intronic	ENSG00000031003	NA	NA	NA	NA	NA	5q31.2	NA	NA	NA	NA	rs3756686	0.45	0.45	0.444	0.449681	0.495	0.5873	0.4323	0.2405	0.5562	0.49	0.59	0.4	0.24	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.113181	NA	NA	NA	NA	NA	0.435	NA	3.505
1302	8	141557497	141557497	T	C	intronic	AGO2	NA	NA	NA	intronic	ENSG00000123908	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs2292782	0.63	0.63	0.613	0.669928	0.495	0.6042	0.6138	0.916	0.6247	0.5	0.61	0.59	0.88	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.710777	NA	NA	NA	NA	NA	0.652	NA	3.505
1302	16	5129892	5129892	T	C	intronic	ALG1	NA	NA	NA	intronic	ENSG00000033011	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs1909748	0.42	0.42	0.364	0.402955	0.495	0.371	0.5648	0.3419	0.3088	0.46	0.37	0.56	0.3	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.949387	NA	NA	NA	NA	NA	0.449	NA	3.505
1302	19	48522894	48522894	C	G	intronic	ELSPBP1	NA	NA	NA	intronic	ENSG00000169393	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs2115100	0.54	0.54	0.498	0.526757	0.495	0.7817	0.6297	0.2958	0.5358	0.52	0.8	0.57	0.25	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.628401	NA	NA	NA	NA	NA	0.362	NA	3.505
1302	22	33960676	33960676	A	G	intronic	LARGE	NA	NA	NA	intronic	ENSG00000133424	NA	NA	NA	NA	NA	22q12.3	NA	NA	NA	NA	rs713795	0.36	0.36	0.322	0.327676	0.495	0.2738	0.4568	0.1392	0.3742	0.5	0.29	0.45	0.15	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.621915	NA	NA	NA	NA	NA	0.377	NA	3.505
1302	5	178567082	178567082	C	T	intronic	ADAMTS2	NA	NA	NA	intronic	ENSG00000087116	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs34369919	0.08	0.08	0.073	0.0706869	0.1789	0.001	0.0749	0.0068	0.1145	0.18	0.0017	0.09	0.01	0.138	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.865819	NA	NA	0.178256	0.031548	NA	0.065	NA	3.504844
1302	15	45974628	45974628	G	A	intronic	SQRDL	NA	NA	NA	intronic	ENSG00000137767	NA	NA	NA	NA	NA	15q21.1	NA	NA	NA	NA	rs2289578	0.21	0.21	0.191	0.229233	0.161	0.3968	0.1614	0.087	0.3671	0.16	0.43	0.15	0.1	0.1946	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.220648	NA	NA	0.140098	0.088717	NA	0.152	NA	3.504302
1302	7	138417718	138417718	A	G	exonic	ATP6V0A4	NA	synonymous SNV	ATP6V0A4:NM_130840:exon16:c.T1812C:p.H604H,ATP6V0A4:NM_130841:exon16:c.T1812C:p.H604H,ATP6V0A4:NM_020632:exon17:c.T1812C:p.H604H	exonic	ENSG00000105929	NA	synonymous SNV	ENSG00000105929:ENST00000353492:exon16:c.T1812C:p.H604H,ENSG00000105929:ENST00000393054:exon16:c.T1812C:p.H604H,ENSG00000105929:ENST00000310018:exon17:c.T1812C:p.H604H	NA	NA	7q34	NA	NA	NA	NA	rs3807154	0.7	0.7	0.676	0.677516	0.7237	0.8472	0.7824	0.4236	0.7239	0.73	0.84	0.76	0.47	0.7197	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.55802	NA	NA	0.719186	0.465048	NA	0.623	NA	3.5040806
1302	1	165636749	165636749	A	G	intronic	ALDH9A1	NA	NA	NA	intronic	ENSG00000143149	NA	NA	NA	NA	NA	1q24.1	NA	NA	NA	NA	rs2176151	0.35	0.35	0.34	0.365016	0.496	0.1567	0.3386	0.3971	0.4202	0.48	0.13	0.33	0.39	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.889367	NA	NA	NA	NA	NA	0.377	NA	3.504
1302	3	189692565	189692565	G	A	intronic	LEPREL1	NA	NA	NA	intronic	ENSG00000090530	NA	NA	NA	NA	NA	3q28	NA	NA	NA	NA	rs1985690	0.57	0.57	0.562	0.561302	0.496	0.7976	0.6153	0.4123	0.5481	0.49	0.83	0.58	0.4	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.416322	NA	NA	NA	NA	NA	0.399	NA	3.504
1302	15	31127554	31127554	C	T	intergenic	HERC2P10,FAN1	dist=7568;dist=68501	NA	NA	ncRNA_intronic	ENSG00000259845	NA	NA	NA	NA	NA	15q13.2	NA	NA	NA	NA	rs739831	0.54	0.54	0.521	0.528754	0.496	0.8264	0.5173	0.2118	0.6922	0.52	0.86	0.52	0.23	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.19537	NA	NA	NA	NA	NA	0.616	NA	3.504
1302	12	57922363	57922363	A	G	intronic	MBD6	NA	NA	NA	intronic	ENSG00000166987	NA	NA	NA	NA	NA	12q13.3	NA	NA	NA	NA	rs2620679	0.24	0.24	0.241	0.236222	0.1759	0.3522	0.1427	0.2859	0.1779	0.18	0.31	0.14	0.32	0.1774	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.171503	NA	NA	0.142791	0.259646	NA	0.232	NA	3.503909
1302	X	302743	302743	G	A	intronic	PPP2R3B	NA	NA	NA	intronic	ENSG00000167393	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs2738361	0.39	0.39	0.34102	NA	NA	NA	NA	NA	NA	0.45	0.44	0.42	0.2	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.145423	NA	NA	0.496229	0.224711	NA	0.232	NA	3.503771
1302	7	138418910	138418910	G	A	exonic	ATP6V0A4	NA	synonymous SNV	ATP6V0A4:NM_130840:exon15:c.C1662T:p.F554F,ATP6V0A4:NM_130841:exon15:c.C1662T:p.F554F,ATP6V0A4:NM_020632:exon16:c.C1662T:p.F554F	exonic	ENSG00000105929	NA	synonymous SNV	ENSG00000105929:ENST00000353492:exon15:c.C1662T:p.F554F,ENSG00000105929:ENST00000393054:exon15:c.C1662T:p.F554F,ENSG00000105929:ENST00000310018:exon16:c.C1662T:p.F554F	NA	NA	7q34	NA	NA	NA	NA	rs1026435	0.73	0.73	0.71	0.716653	0.7147	0.8403	0.7709	0.6074	0.7004	0.72	0.84	0.73	0.62	0.7267	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.814504	NA	NA	0.721512	0.608488	NA	0.674	NA	3.5037546
1302	1	21934667	21934667	G	A	intronic	RAP1GAP	NA	NA	NA	intronic	ENSG00000076864	NA	NA	NA	NA	NA	1p36.12	NA	Name=YY1,Pol2-4H8,TAF1,HMGN3,TBP,GTF2F1_(RAP-74),HEY1	NA	NA	rs829371	0.46	0.46	0.491	0.448482	0.502	0.4355	0.3401	0.4675	0.4581	0.51	0.45	0.35	0.48	0.4749	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.334459	NA	NA	0.519419	0.45663	NA	0.413	NA	3.503681
1302	19	22156585	22156585	G	T	exonic	ZNF208	NA	synonymous SNV	ZNF208:NM_007153:exon4:c.C1251A:p.V417V	exonic	ENSG00000160321	NA	synonymous SNV	ENSG00000160321:ENST00000397126:exon4:c.C1251A:p.V417V	NA	NA	19p12	NA	NA	NA	NA	rs1018912	0.69	0.69	0.751	0.77516	0.7376	0.8125	0.7594	0.9599	0.5368	0.64	0.72	0.62	0.8	0.724	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.619056	NA	NA	0.701432	0.9119	NA	0.667	NA	3.5036346
1302	7	7421310	7421310	A	G	intronic	COL28A1	NA	NA	NA	intronic	ENSG00000215018	NA	NA	NA	Score=259;Name=lod=15	NA	7p21.3	NA	NA	NA	NA	rs1294627	0.67	0.67	0.637	0.658546	0.7614	0.8869	0.7579	0.1868	0.8845	0.77	0.88	0.75	0.2	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.175585	NA	NA	0.735387	0.281069	NA	0.674	NA	3.503213
1302	6	111665071	111665071	T	C	intronic	REV3L	NA	NA	NA	intronic	ENSG00000009413	NA	NA	NA	NA	NA	6q21	NA	NA	NA	NA	rs1623806	0.38	0.38	0.369	0.354233	0.497	0.4187	0.4337	0.0461	0.501	0.51	0.44	0.44	0.06	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.532018	NA	NA	NA	NA	NA	0.471	NA	3.503
1302	6	131540726	131540726	A	T	intronic	AKAP7	NA	NA	NA	intronic	ENSG00000118507	NA	NA	NA	NA	NA	6q23.2	NA	NA	NA	NA	rs3822866	0.47	0.47	0.449	0.463658	0.497	0.3046	0.5749	0.5749	0.364	0.48	0.3	0.58	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.35321	1.35321	NA	NA	NA	NA	0.522	NA	3.503
1302	16	10788106	10788106	A	G	intronic	TEKT5	NA	NA	NA	intronic	ENSG00000153060	NA	NA	NA	NA	NA	16p13.13	NA	NA	NA	NA	rs2251984	0.58	0.58	0.574	0.589856	0.497	0.6121	0.6268	0.6762	0.5194	0.52	0.62	0.57	0.64	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.404037	NA	NA	NA	NA	NA	0.717	NA	3.503
1302	17	28120851	28120851	A	C	intronic	SSH2	NA	NA	NA	intronic	ENSG00000141298	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs2617882	0.39	0.39	0.367	0.392971	0.497	0.2808	0.4078	0.3759	0.4141	0.48	0.27	0.42	0.37	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.627403	2.627403	NA	NA	NA	NA	0.283	NA	3.503
1302	18	6942295	6942295	T	C	intronic	LAMA1	NA	NA	NA	intronic	ENSG00000101680	NA	NA	NA	NA	NA	18p11.31	NA	NA	NA	NA	rs733918	0.37	0.37	0.339	0.314896	0.497	0.2054	0.3141	0.3064	0.2526	0.5	0.22	0.38	0.34	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.878316	NA	NA	NA	NA	NA	0.406	NA	3.503
1302	19	829408	829408	A	G	intronic	AZU1	NA	NA	NA	intronic	ENSG00000172232	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs687077	0.59	0.59	0.614	0.641174	0.497	0.4891	0.6052	0.9206	0.5941	0.5	0.46	0.57	0.91	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.405253	NA	NA	NA	NA	NA	0.645	NA	3.503
1302	17	71241279	71241279	C	T	intronic	C17orf80	NA	NA	NA	intronic	ENSG00000141219	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs74822881	0.1	0.1	0.087	0.109425	0.1869	0.0188	0.1369	0.0537	0.1789	0.18	0.02	0.15	0.04	0.1443	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.218465	NA	NA	0.166027	0.057625	NA	0.072	NA	3.502773
1302	1	92108899	92108899	C	T	intergenic	CDC7,TGFBR3	dist=117578;dist=37001	NA	NA	ncRNA_exonic	ENSG00000203914	NA	NA	NA	Score=786;Name=lod=2089	NA	1p22.1	NA	NA	NA	NA	rs2493202	0.81	0.81	0.781	0.821086	0.7157	0.9643	0.866	0.6959	0.9192	0.71	0.97	0.85	0.73	0.7816	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.182639	NA	NA	NA	NA	NA	0.783	NA	3.5027
1302	12	6639088	6639088	A	G	exonic	NCAPD2	NA	synonymous SNV	NCAPD2:NM_014865:exon29:c.A3801G:p.V1267V	exonic	ENSG00000010292	NA	synonymous SNV	ENSG00000010292:ENST00000545962:exon28:c.A3666G:p.V1222V,ENSG00000010292:ENST00000315579:exon29:c.A3801G:p.V1267V	NA	NA	12p13.31	NA	NA	NA	NA	rs1043262	0.78	0.78	0.78	0.78155	0.7137	0.7063	0.8228	0.9115	0.7239	0.72	0.71	0.81	0.93	0.7433	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.612271	NA	NA	0.706977	0.893554	NA	0.812	NA	3.5026896
1302	17	4796656	4796656	T	C	intronic	MINK1	NA	NA	NA	intronic	ENSG00000141503	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs2302320	0.31	0.31	0.303	0.310703	0.2594	0.1855	0.3098	0.5333	0.1922	0.23	0.19	0.3	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.262636	NA	NA	0.238128	0.433243	NA	0.355	NA	3.502472
1302	13	99076965	99076965	A	G	intronic	FARP1	NA	NA	NA	intronic	ENSG00000152767	NA	NA	NA	NA	NA	13q32.2	NA	NA	NA	NA	rs7984394	0.38	0.38	0.369	0.391573	0.2465	0.3492	0.4164	0.5393	0.3671	0.25	0.38	0.42	0.53	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.870068	NA	NA	0.2511	0.501445	NA	0.391	NA	3.5024
1302	12	122674758	122674758	G	A	exonic	LRRC43	NA	synonymous SNV	LRRC43:NM_001098519:exon5:c.G744A:p.R248R,LRRC43:NM_152759:exon5:c.G189A:p.R63R	exonic	ENSG00000158113	NA	synonymous SNV	ENSG00000158113:ENST00000339777:exon5:c.G744A:p.R248R,ENSG00000158113:ENST00000425921:exon5:c.G189A:p.R63R,ENSG00000158113:ENST00000537729:exon5:c.G189A:p.R63R	NA	NA	12q24.31	NA	NA	NA	NA	rs4758651	0.68	0.68	0.666	0.649161	0.7326	0.9008	0.6383	0.3404	0.729	0.75	0.92	0.62	0.35	0.7073	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.042255	NA	NA	0.724571	0.412037	NA	0.609	NA	3.5021956
1302	5	178986978	178986978	C	G	UTR5	RUFY1	NM_001040451:c.-62C>G	NA	NA	UTR5	ENSG00000176783	ENST00000437570:c.-62C>G	NA	NA	NA	NA	5q35.3	NA	Name=TAF1,ZNF263,Pol2,c-Myc	NA	NA	rs7704349	0.46	0.46	0.418	0.438099	0.6471	0.2579	0.5014	0.3502	0.4826	0.65	0.25	0.49	0.38	0.5463	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.420807	NA	NA	0.637791	0.40286	NA	0.507	NA	3.5021424
1302	1	210006603	210006603	C	T	exonic	DIEXF	NA	synonymous SNV	DIEXF:NM_014388:exon4:c.C462T:p.P154P	exonic	ENSG00000117597	NA	synonymous SNV	ENSG00000117597:ENST00000491415:exon4:c.C462T:p.P154P	NA	NA	1q32.2	NA	NA	NA	NA	rs656566	0.6	0.6	0.605	0.590256	0.7286	0.3859	0.5418	0.6082	0.6687	0.72	0.41	0.61	0.63	0.6741	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.365895	NA	NA	0.76186	0.598275	ID=COSM146755;OCCURENCE=1(stomach)	0.71	NA	3.5021066
1302	3	52847601	52847601	C	T	intronic	ITIH4	NA	NA	NA	intronic	ENSG00000055955,ENSG00000243696	NA	NA	NA	NA	NA	3p21.1	NA	NA	NA	NA	rs2071044	0.57	0.57	0.588	0.552716	0.498	0.4256	0.6066	0.7799	0.3947	0.5	0.48	0.63	0.75	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.247661	NA	NA	NA	NA	NA	0.529	NA	3.502
1302	11	101848990	101848990	A	G	intronic	KIAA1377	NA	NA	NA	intronic	ENSG00000110318	NA	NA	NA	NA	NA	11q22.1	NA	NA	NA	NA	rs3740931	0.6	0.6	0.603	0.585264	0.498	0.7649	0.4409	0.6558	0.4969	0.48	0.79	0.47	0.69	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.231426	NA	NA	NA	NA	NA	0.572	NA	3.502
1302	12	124857274	124857274	G	A	intronic	NCOR2	NA	NA	NA	intronic	ENSG00000196498	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs4765147	0.33	0.33	0.318	0.332268	0.498	0.1518	0.5519	0.1762	0.4029	0.49	0.13	0.56	0.17	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.789461	NA	NA	NA	NA	NA	0.232	NA	3.502
1302	16	88675177	88675177	A	G	intronic	ZC3H18	NA	NA	NA	intronic	ENSG00000158545	NA	NA	NA	NA	NA	16q24.2	NA	NA	NA	NA	rs9932685	0.56	0.56	0.575	0.537939	0.498	0.5813	0.5922	0.643	0.3538	0.51	0.6	0.53	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.360334	NA	NA	NA	NA	NA	0.478	NA	3.502
1302	20	36995340	36995340	C	T	intronic	LBP	NA	NA	NA	intronic	ENSG00000129988	NA	NA	NA	NA	NA	20q11.23	NA	NA	NA	NA	rs1739639	0.65	0.65	0.629	0.666933	0.498	0.9335	0.5519	0.6369	0.6881	0.49	0.93	0.55	0.63	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.257392	NA	NA	NA	NA	NA	0.609	NA	3.502
1302	21	47656712	47656712	T	C	ncRNA_intronic	MCM3AP-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000215424	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs2839166	0.27	0.27	0.257	0.264776	0.4215	0.1111	0.2363	0.202	0.3671	0.41	0.1	0.29	0.22	0.3433	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.725504	NA	NA	0.399884	0.218339	NA	0.304	NA	3.5019826
1302	11	47758152	47758152	T	C	intronic	FNBP4	NA	NA	NA	intronic	ENSG00000109920	NA	NA	NA	NA	NA	11p11.2	NA	NA	NA	NA	rs59205786	0.22	0.22	0.199	0.21845	0.1421	0.2937	0.1988	0.298	0.1258	0.15	0.32	0.2	0.25	0.2199	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.032192	NA	NA	0.136229	0.267767	NA	0.167	NA	3.501771
1302	1	210012102	210012102	A	G	intronic	DIEXF	NA	NA	NA	intronic	ENSG00000117597	NA	NA	NA	NA	NA	1q32.2	NA	Name=HNF4A_(H-171),STAT3,CEBPB	NA	NA	rs1962735	0.74	0.74	0.716	0.724641	0.7445	0.8026	0.7233	0.6225	0.7628	0.74	0.8	0.75	0.64	0.7538	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.184769	3.184769	NA	NA	NA	NA	0.754	NA	3.5017
1302	8	23294412	23294412	A	G	intronic	ENTPD4	NA	NA	NA	intronic	ENSG00000197217	NA	NA	NA	NA	NA	8p21.3	NA	NA	NA	NA	rs2272642	0.14	0.14	0.121	0.119609	0.1789	0.0565	0.2392	0.0915	0.0767	0.2	0.06	0.21	0.08	0.1493	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.071788	NA	NA	0.170116	0.116659	NA	0.138	NA	3.501684
1302	3	10133949	10133949	A	G	intronic	FANCD2,FANCD2OS	NA	NA	NA	intronic	ENSG00000144554,ENSG00000163705	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs9811771	0.23	0.23	0.242	0.254193	0.1412	0.0675	0.1974	0.5431	0.2127	0.15	0.1	0.21	0.55	0.1918	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.442413	3.442413	NA	0.165349	0.490241	NA	0.37	NA	3.501651
1302	7	45747933	45747933	A	G	intronic	ADCY1	NA	NA	NA	intronic	ENSG00000164742	NA	NA	NA	NA	NA	7p12.3	NA	NA	NA	NA	rs2280497	0.14	0.14	0.134	0.127995	0.1809	0.121	0.1052	0.1649	0.047	0.18	0.1	0.13	0.14	0.1442	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.220247	NA	NA	0.173256	0.170981	NA	0.246	NA	3.501644
1302	9	33386226	33386226	T	C	intronic	AQP7	NA	NA	NA	intronic	ENSG00000165269	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs78244036	NA	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4985	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.531084	NA	NA	NA	NA	ID=COSN168507;OCCURENCE=1(large_intestine)	NA	NA	3.5015
1302	19	9002493	9002493	T	C	intronic	MUC16	NA	NA	NA	intronic	ENSG00000181143	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs77972891	NA	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4986	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.782003	NA	NA	NA	NA	NA	NA	NA	3.5014
1302	16	56667854	56667854	A	G	UTR3	MT1M	NM_176870:c.*100A>G	NA	NA	UTR3	ENSG00000205364	ENST00000379818:c.*100A>G	NA	NA	NA	NA	16q12.2	NA	NA	NA	NA	rs2270837	0.73	0.73	0.714	0.710064	0.832	0.6657	0.7867	0.5469	0.7965	0.83	0.7	0.8	0.54	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.268492	NA	NA	NA	NA	NA	0.768	NA	3.5013334
1302	9	139746992	139746992	G	A	intronic	MAMDC4	NA	NA	NA	intronic	ENSG00000177943	NA	NA	NA	NA	NA	9q34.3	NA	Name=Pol2(phosphoS2)	NA	NA	rs10123375	0.77	0.77	0.818	0.773762	0.7495	0.875	0.5533	0.8404	0.7607	0.76	0.88	0.59	0.82	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.282891	NA	NA	0.749214	0.822254	NA	0.862	NA	3.501286
1302	6	57246785	57246785	A	C	intronic	PRIM2	NA	NA	NA	intronic	ENSG00000146143	NA	NA	NA	NA	NA	6p11.2	NA	NA	NA	NA	rs62415470	NA	NA	NA	0.000199681	NA	0.001	NA	NA	NA	NA	NA	NA	NA	0.4989	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.588245	2.588245	NA	NA	NA	NA	0.493	NA	3.5011
1302	9	33386243	33386243	C	T	intronic	AQP7	NA	NA	NA	intronic	ENSG00000165269	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs76705820	NA	NA	NA	0.000199681	0.001	NA	NA	NA	NA	NA	NA	NA	NA	0.4979	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.930947	NA	NA	NA	NA	NA	NA	NA	3.5011
1302	1	144855935	144855935	A	G	intronic	NBPF9,PDE4DIP	NA	NA	NA	intronic	ENSG00000178104	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs1698581	NA	NA	0.451	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.499	0.087	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.598436	NA	NA	NA	NA	NA	0.094	NA	3.501
1302	2	100925439	100925439	G	A	intronic	LONRF2	NA	NA	NA	intronic	ENSG00000170500	NA	NA	NA	NA	NA	2q11.2	NA	NA	NA	NA	rs11693424	0.5	0.5	0.485	0.451877	0.499	0.7232	0.4726	0.3162	0.2924	0.5	0.72	0.44	0.28	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.370201	NA	NA	NA	NA	ID=COSN166222;OCCURENCE=1(breast)	0.442	NA	3.501
1302	2	105388252	105388252	C	G	intergenic	LOC284998,LOC100506421	dist=14075;dist=33631	NA	NA	ncRNA_exonic	ENSG00000213301	NA	NA	NA	NA	NA	2q12.1	NA	NA	NA	NA	rs13003463	0.44	0.44	0.417	0.452476	0.499	0.1736	0.536	0.6483	0.3681	0.47	0.18	0.53	0.63	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.455696	NA	NA	NA	NA	NA	0.536	NA	3.501
1302	5	136193610	136193610	T	C	intergenic	TRPC7,SPOCK1	dist=492446;dist=117377	NA	NA	ncRNA_exonic	ENSG00000248616	NA	NA	NA	NA	NA	5q31.1	NA	NA	NA	NA	rs13186242	0.58	0.58	0.567	0.619609	0.499	0.6091	0.5245	0.7632	0.6278	0.51	0.56	0.49	0.8	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.576341	NA	NA	NA	NA	NA	0.638	NA	3.501
1302	17	21318586	21318586	G	C	intronic	KCNJ12,KCNJ18	NA	NA	NA	intronic	ENSG00000184185	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs59891808	NA	NA	NA	0.501198	0.499	0.504	0.5014	0.5015	0.5	NA	NA	NA	NA	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.035316	NA	NA	NA	NA	NA	0.341	NA	3.501
1302	20	43623658	43623658	C	T	intronic	STK4	NA	NA	NA	intronic	ENSG00000101109	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs6017460	0.36	0.36	0.316	0.360024	0.499	0.2639	0.2882	0.3631	0.363	0.49	0.21	0.3	0.39	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.820593	NA	NA	NA	NA	NA	0.406	NA	3.501
1302	10	100242345	100242345	C	G	intronic	HPSE2	NA	NA	NA	intronic	ENSG00000172987	NA	NA	NA	NA	NA	10q24.2	NA	NA	NA	NA	rs1932800	0.28	0.28	0.305	0.315096	0.1451	0.2222	0.2334	0.6528	0.1871	0.13	0.21	0.21	0.63	0.2074	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.906924	NA	NA	0.146744	0.570813	NA	0.268	NA	3.500756
1302	10	28408538	28408538	C	T	intronic	MPP7	NA	NA	NA	intronic	ENSG00000150054	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs10047289	0.33	0.33	0.306	0.376797	0.1243	0.7728	0.3818	0.2337	0.4182	0.12	0.75	0.32	0.19	0.2526	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.763454	NA	NA	0.122674	0.226282	NA	0.268	NA	3.500426
1302	17	21208449	21208449	G	T	intronic	MAP2K3	NA	NA	NA	intronic	ENSG00000034152	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs1657694	0.5	0.5	0.38	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.4996	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.514403	NA	NA	NA	NA	NA	0.486	NA	3.5004
1302	6	57247022	57247022	C	T	intronic	PRIM2	NA	NA	NA	intronic	ENSG00000146143	NA	NA	NA	NA	NA	6p11.2	NA	NA	NA	NA	rs4382263	NA	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4997	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.837095	NA	NA	NA	NA	NA	0.5	NA	3.5003
1302	1	144854497	144854497	A	G	intronic	NBPF9,PDE4DIP	NA	NA	NA	intronic	ENSG00000178104	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs2653676	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4998	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.418934	NA	NA	NA	NA	NA	NA	NA	3.5002
1302	6	57246815	57246815	T	C	intronic	PRIM2	NA	NA	NA	intronic	ENSG00000146143	NA	NA	NA	NA	NA	6p11.2	NA	NA	NA	NA	rs6936571	NA	NA	NA	0.000199681	NA	NA	NA	0.0008	NA	NA	NA	NA	NA	0.4998	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.513211	NA	NA	NA	NA	NA	0.486	NA	3.5002
1302	6	57246982	57246982	G	T	intronic	PRIM2	NA	NA	NA	intronic	ENSG00000146143	NA	NA	NA	NA	NA	6p11.2	NA	NA	NA	NA	rs4585567	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4998	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.576696	NA	NA	NA	NA	NA	0.5	NA	3.5002
1302	17	21204153	21204153	C	T	intronic	MAP2K3	NA	NA	NA	intronic	ENSG00000034152	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs66883103	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.4998	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.017594	NA	NA	NA	NA	NA	0.399	NA	3.5002
1302	17	21208456	21208456	A	G	intronic	MAP2K3	NA	NA	NA	intronic	ENSG00000034152	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs1657693	0.5	0.5	0.38	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.4998	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.115536	NA	NA	NA	NA	NA	0.478	NA	3.5002
1302	17	21216788	21216788	C	T	intronic	MAP2K3	NA	NA	NA	intronic	ENSG00000034152	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs1673840	0.5	0.5	0.45	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.4998	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.322802	NA	NA	NA	NA	NA	0.5	NA	3.5002
1302	14	58737766	58737766	A	T	ncRNA_intronic	FLJ31306	NA	NA	NA	ncRNA_intronic	ENSG00000257621	NA	NA	NA	NA	NA	14q23.1	NA	Name=Pol2	NA	NA	rs8005100	0.65	0.65	0.671	0.671925	0.7396	0.4137	0.6888	0.8056	0.6759	0.71	0.4	0.7	0.81	0.6926	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.391078	NA	NA	0.734302	0.778484	ID=COSN164688;OCCURENCE=1(breast)	0.688	NA	3.5001646
1302	7	21641269	21641269	A	G	intronic	DNAH11	NA	NA	NA	intronic	ENSG00000105877	NA	NA	NA	NA	NA	7p15.3	NA	NA	NA	NA	rs10499531	0.11	0.11	0.104	0.101238	0.173	0.0327	0.1066	0.0877	0.1125	0.16	0.05	0.13	0.08	0.1691	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.145207	NA	NA	0.157766	0.090085	NA	0.21	NA	3.500134
1302	17	21205604	21205604	T	C	intronic	MAP2K3	NA	NA	NA	intronic	ENSG00000034152	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs62057722	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.4999	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.309056	NA	NA	NA	NA	NA	0.449	NA	3.5001
1302	1	12919422	12919422	T	C	intronic	PRAMEF2	NA	NA	NA	intronic	ENSG00000120952	NA	NA	NA	NA	NA	1p36.21	NA	NA	NA	NA	rs74056157	NA	NA	NA	0.500399	0.5	0.4911	0.513	0.5015	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.821538	NA	NA	NA	NA	NA	NA	NA	3.5
1302	1	12919423	12919423	G	A	intronic	PRAMEF2	NA	NA	NA	intronic	ENSG00000120952	NA	NA	NA	NA	NA	1p36.21	NA	NA	NA	NA	rs74056158	NA	NA	NA	0.500399	0.5	0.4911	0.513	0.5015	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.109975	NA	NA	NA	NA	NA	NA	NA	3.5
1302	1	59096494	59096494	T	C	intergenic	TACSTD2,MYSM1	dist=53328;dist=23917	NA	NA	downstream	ENSG00000185839	NA	NA	NA	NA	NA	1p32.1	NA	NA	NA	NA	rs72676738	NA	NA	0.375	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.354056	NA	NA	NA	NA	ID=COSN163103;OCCURENCE=1(breast),1(lung)	0.413	NA	3.5
1302	1	144852545	144852545	C	T	intronic	NBPF9,PDE4DIP	NA	NA	NA	intronic	ENSG00000178104	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs1699760	NA	NA	0.353	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.043551	NA	NA	NA	NA	NA	0.007	NA	3.5
1302	1	144854491	144854491	T	G	intronic	NBPF9,PDE4DIP	NA	NA	NA	intronic	ENSG00000178104	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs2798856	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.506497	NA	NA	NA	NA	NA	NA	NA	3.5
1302	1	144873840	144873840	A	G	intronic	NBPF9,PDE4DIP	NA	NA	NA	intronic	ENSG00000178104	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs1627335	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.003532	NA	NA	NA	NA	NA	0.478	NA	3.5
1302	1	144874070	144874070	C	T	intronic	NBPF9,PDE4DIP	NA	NA	NA	intronic	ENSG00000178104	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs1610565	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.289055	NA	NA	NA	NA	NA	0.5	NA	3.5
1302	1	144874641	144874641	G	C	intronic	NBPF9,PDE4DIP	NA	NA	NA	intronic	ENSG00000178104	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs1610771	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.159713	NA	NA	NA	NA	NA	0.5	NA	3.5
1302	1	144922171	144922171	C	T	intronic	NBPF9,PDE4DIP	NA	NA	NA	intronic	ENSG00000178104	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs1343470	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.850762	NA	NA	NA	NA	NA	0.5	NA	3.5
1302	1	144946768	144946768	G	A	intronic	NBPF9,PDE4DIP	NA	NA	NA	intronic	ENSG00000178104	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs2762733	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.169263	NA	NA	NA	NA	NA	0.5	NA	3.5
1302	2	91795325	91795325	A	G	intergenic	NONE,LOC654342	dist=NONE;dist=29384	NA	NA	ncRNA_intronic	ENSG00000233991	NA	NA	NA	NA	NA	2p11.1	NA	NA	NA	NA	rs1640026	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	NA	NA	NA	NA	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.931947	NA	NA	NA	NA	NA	0.5	NA	3.5
1302	3	196263661	196263661	C	A	intergenic	C3orf43,WDR53	dist=21424;dist=17398	NA	NA	downstream	ENSG00000225770	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs7633310	NA	NA	0.952	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.363041	NA	NA	NA	NA	NA	0.659	NA	3.5
1302	5	110286503	110286503	T	C	intergenic	SLC25A46,TSLP	dist=188019;dist=120887	NA	NA	upstream	ENSG00000248966	NA	NA	NA	NA	NA	5q22.1	NA	NA	NA	NA	rs62375538	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.630796	NA	NA	NA	NA	NA	0.043	NA	3.5
1302	6	57372361	57372361	C	A	intronic	PRIM2	NA	NA	NA	intronic	ENSG00000146143	NA	NA	NA	NA	NA	6p11.2	NA	NA	NA	NA	rs9382770	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.621012	NA	NA	NA	NA	NA	0.5	NA	3.5
1302	6	57512439	57512439	T	C	intronic	PRIM2	NA	NA	NA	intronic	ENSG00000146143	NA	NA	NA	NA	NA	6p11.2	NA	NA	NA	NA	rs4294006	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.20542	NA	NA	NA	NA	NA	0.196	NA	3.5
1302	7	57669857	57669857	T	A	intergenic	ZNF716,NONE	dist=136592;dist=NONE	NA	NA	downstream	ENSG00000233601	NA	NA	NA	NA	NA	7p11.2	NA	NA	NA	NA	rs77810058	NA	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.745277	NA	NA	NA	NA	NA	NA	NA	3.5
1302	7	142498673	142498673	G	A	intergenic	PRSS3P2,EPHB6	dist=16274;dist=54119	NA	NA	upstream	ENSG00000211772	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs376425724	NA	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.076	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.101982	NA	NA	NA	NA	NA	0.08	NA	3.5
1302	9	40292932	40292932	T	C	intergenic	FAM74A1,SPATA31A3	dist=385692;dist=407359	NA	NA	upstream	ENSG00000185020	NA	NA	NA	NA	NA	9p13.1	NA	NA	NA	NA	rs2935389	NA	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.523503	NA	NA	NA	NA	NA	NA	NA	3.5
1302	9	66836960	66836960	A	C	intergenic	PTGER4P2-CDK2AP2P2,LOC286297	dist=333930;dist=180415	NA	NA	downstream	ENSG00000270092	NA	NA	NA	NA	NA	9q13	NA	NA	NA	NA	rs3890047	NA	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.113483	NA	NA	NA	NA	NA	0.529	NA	3.5
1302	9	68357234	68357234	T	C	intergenic	ANKRD20A3,LOC642236	dist=386941;dist=70549	NA	NA	downstream	ENSG00000228656	NA	NA	NA	NA	NA	9q13	NA	NA	NA	NA	rs3119158	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.685972	NA	NA	NA	NA	NA	NA	NA	3.5
1302	9	68357263	68357263	G	C	intergenic	ANKRD20A3,LOC642236	dist=386970;dist=70520	NA	NA	downstream	ENSG00000228656	NA	NA	NA	NA	NA	9q13	NA	NA	NA	NA	rs3124521	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.401196	NA	NA	NA	NA	NA	NA	NA	3.5
1302	9	68412779	68412779	A	T	intergenic	ANKRD20A3,LOC642236	dist=442486;dist=15004	NA	NA	downstream	ENSG00000232815	NA	NA	NA	NA	NA	9q13	NA	NA	NA	NA	rs62545682	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.246938	NA	NA	NA	NA	NA	0.348	NA	3.5
1302	9	68412792	68412792	T	C	intergenic	ANKRD20A3,LOC642236	dist=442499;dist=14991	NA	NA	downstream	ENSG00000232815	NA	NA	NA	NA	NA	9q13	NA	NA	NA	NA	rs150643179	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.53432	NA	NA	NA	NA	NA	0.043	NA	3.5
1302	9	68412795	68412795	C	T	intergenic	ANKRD20A3,LOC642236	dist=442502;dist=14988	NA	NA	downstream	ENSG00000232815	NA	NA	NA	NA	NA	9q13	NA	NA	NA	NA	rs145483733	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.043	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.679365	NA	NA	NA	NA	NA	0.043	NA	3.5
1302	10	119029515	119029515	C	T	intronic	SLC18A2	NA	NA	NA	intronic	ENSG00000165646	NA	NA	NA	NA	NA	10q25.3	NA	NA	NA	NA	rs363230	0.49	0.49	0.463	0.467652	0.5	0.5327	0.549	0.3502	0.4683	0.51	0.55	0.52	0.36	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.440953	NA	NA	NA	NA	NA	0.493	NA	3.5
1302	10	135455222	135455222	A	G	intergenic	FRG2B,DUX4L2	dist=14923;dist=25146	NA	NA	upstream	ENSG00000233435	NA	NA	NA	NA	NA	10q26.3	NA	NA	NA	NA	rs78722606	NA	NA	0.306	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.338767	NA	NA	NA	NA	NA	NA	NA	3.5
1302	14	106721314	106721314	G	A	intergenic	ADAM6,LINC00226	dist=282956;dist=22955	NA	NA	upstream	ENSG00000254045	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs60338422	0.5	0.5	0.548	NA	NA	NA	NA	NA	NA	0.52	0.43	0.47	0.57	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.784582	NA	NA	NA	NA	NA	0.536	NA	3.5
1302	14	106919159	106919159	C	G	intergenic	LINC00226,LINC00221	dist=174193;dist=19296	NA	NA	downstream	ENSG00000254228	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs76055263	0.24	0.24	0.199	NA	NA	NA	NA	NA	NA	0.25	0.13	0.2	0.38	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.601623	NA	NA	NA	NA	NA	NA	NA	3.5
1302	14	106919528	106919528	A	G	intergenic	LINC00226,LINC00221	dist=174562;dist=18927	NA	NA	upstream	ENSG00000254228	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs79553915	0.27	0.27	0.234	NA	NA	NA	NA	NA	NA	0.27	0.16	0.2	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.603138	NA	NA	NA	NA	NA	0.254	NA	3.5
1302	14	106919537	106919537	T	C	intergenic	LINC00226,LINC00221	dist=174571;dist=18918	NA	NA	upstream	ENSG00000254228	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs78100248	0.27	0.27	0.239	NA	NA	NA	NA	NA	NA	0.27	0.16	0.2	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.217571	NA	NA	NA	NA	NA	0.254	NA	3.5
1302	14	106926107	106926107	T	C	intergenic	LINC00226,LINC00221	dist=181141;dist=12348	NA	NA	downstream	ENSG00000232216	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs7401587	0.38	0.38	0.357	NA	NA	NA	NA	NA	NA	0.32	0.42	0.31	0.48	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.720189	NA	NA	NA	NA	NA	0.333	NA	3.5
1302	14	107275821	107275821	C	A	intergenic	LINC00221,NONE	dist=324292;dist=NONE	NA	NA	downstream	ENSG00000254284	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs113098978	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.873874	NA	NA	NA	NA	NA	NA	NA	3.5
1302	15	21903842	21903842	A	G	intergenic	CT60,LOC646214	dist=705209;dist=28672	NA	NA	upstream	ENSG00000258883	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs8025343	NA	NA	0.576	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.697728	NA	NA	NA	NA	NA	0.522	NA	3.5
1302	15	21904049	21904049	G	A	intergenic	CT60,LOC646214	dist=705416;dist=28465	NA	NA	upstream	ENSG00000258883	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs28417205	NA	NA	0.314	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.571524	NA	NA	NA	NA	NA	0.225	NA	3.5
1302	15	22482721	22482721	T	C	intergenic	OR4N3P,REREP3	dist=68326;dist=63844	NA	NA	downstream	ENSG00000270356	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs1973424	NA	NA	0.272	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.131827	NA	NA	NA	NA	NA	0.362	NA	3.5
1302	17	21202272	21202272	C	G	intronic	MAP2K3	NA	NA	NA	intronic	ENSG00000034152	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs34880480	0.5	0.5	0.42	0.00119808	NA	0.004	NA	0.0015	NA	0.5	0.5	0.5	0.5	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.184198	NA	NA	NA	NA	NA	0.442	NA	3.5
1302	17	21215446	21215446	C	T	intronic	MAP2K3	NA	NA	NA	intronic	ENSG00000034152	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs62055363	0.5	0.5	0.44	NA	NA	NA	NA	NA	NA	0.5	0.5	0.5	0.5	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.120312	NA	NA	NA	NA	NA	0.297	NA	3.5
1302	17	21544646	21544646	T	C	intergenic	C17orf51,FAM27L	dist=89705;dist=280724	NA	NA	downstream	ENSG00000265019	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs9285745	NA	NA	0.313	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.610938	NA	NA	NA	NA	NA	0.435	NA	3.5
1302	19	9345802	9345802	A	G	intergenic	OR7D4,OR7E24	dist=20255;dist=15918	NA	NA	upstream	ENSG00000188314	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs1968134	0.02	0.02	0.023	0.0279553	NA	NA	0.0058	0.1029	NA	NA	NA	0.01	0.09	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.215457	NA	NA	NA	NA	NA	0.029	NA	3.5
1302	X	155215952	155215952	A	C	intergenic	VAMP7,IL9R	dist=42519;dist=11294	NA	NA	upstream	ENSG00000223484	NA	NA	NA	NA	NA	Xq28	NA	NA	NA	NA	rs4013614	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.141964	NA	NA	NA	NA	NA	0.775	NA	3.5
1302	20	17474968	17474968	T	C	exonic	BFSP1	NA	synonymous SNV	BFSP1:NM_001161705:exon8:c.A1374G:p.P458P,BFSP1:NM_001195:exon8:c.A1749G:p.P583P	exonic	ENSG00000125864	NA	synonymous SNV	ENSG00000125864:ENST00000377868:exon8:c.A1374G:p.P458P,ENSG00000125864:ENST00000377873:exon8:c.A1749G:p.P583P,ENSG00000125864:ENST00000544874:exon9:c.A1332G:p.P444P,ENSG00000125864:ENST00000536626:exon10:c.A1332G:p.P444P	NA	NA	20p12.1	NA	NA	NA	NA	rs6080718	0.73	0.73	0.728	0.750599	0.7286	0.6438	0.7608	0.7958	0.8149	0.71	0.63	0.81	0.82	0.7285	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.259324	NA	NA	0.709884	0.799138	NA	0.746	NA	3.4996826
1302	5	131321159	131321159	G	C	intronic	ACSL6	NA	NA	NA	intronic	ENSG00000164398	NA	NA	NA	NA	NA	5q31.1	NA	NA	NA	NA	rs11740791	0.09	0.09	0.079	0.0609026	0.175	NA	0.1282	0.0076	0.0307	0.18	NA	0.16	0.01	0.1316	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.879961	NA	NA	0.194302	0.042442	NA	0.022	NA	3.499098
1302	6	10214626	10214626	C	T	intergenic	LOC100506207,TFAP2A	dist=1428948;dist=182290	NA	NA	upstream	ENSG00000229765	NA	NA	NA	NA	NA	6p24.3	NA	NA	NA	NA	rs73411334	0.03	0.03	0.037	0.0401358	0.001	NA	0.0173	0.1422	NA	NA	NA	0.01	0.13	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.999329	NA	NA	NA	NA	NA	0.058	NA	3.499
1302	7	93073147	93073147	C	G	intronic	CALCR	NA	NA	NA	intronic	ENSG00000004948	NA	NA	NA	NA	NA	7q21.3	NA	NA	NA	NA	rs2074123	0.52	0.52	0.524	0.514377	0.501	0.4286	0.6326	0.5643	0.4652	0.49	0.45	0.58	0.59	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.273085	NA	NA	NA	NA	NA	0.572	NA	3.499
1302	10	134650146	134650146	C	G	intronic	TTC40	NA	NA	NA	intronic	ENSG00000171811	NA	NA	NA	NA	NA	10q26.3	NA	NA	NA	NA	rs3750581	NA	NA	NA	0.504992	0.501	0.4038	0.5937	0.4917	0.5685	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.128765	NA	NA	NA	NA	NA	NA	NA	3.499
1302	17	21217411	21217411	T	C	intronic	MAP2K3	NA	NA	NA	intronic	ENSG00000034152	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs1657684	0.5	0.5	0.43	0.00199681	0.001	NA	NA	NA	0.0092	0.5	0.5	0.5	0.5	0.5	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.066565	NA	NA	NA	NA	NA	0.5	NA	3.499
1302	18	28913811	28913811	T	C	intronic	DSG1	NA	NA	NA	intronic	ENSG00000134760	NA	NA	NA	NA	NA	18q12.1	NA	NA	NA	NA	rs2007149	0.32	0.32	0.292	0.327676	0.501	0.0665	0.2882	0.292	0.4949	0.51	0.06	0.34	0.29	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.397676	NA	NA	NA	NA	NA	0.377	NA	3.499
1302	22	31501788	31501788	T	C	intronic	SELM	NA	NA	NA	intronic	ENSG00000198832	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs11705137	0.31	0.31	0.299	0.328075	0.501	0.0308	0.4323	0.2602	0.4744	0.49	0.03	0.44	0.28	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.673481	1.673481	NA	NA	NA	NA	0.377	NA	3.499
1302	10	133769482	133769482	G	C	UTR3	PPP2R2D	NM_018461:c.*15G>C	NA	NA	UTR3	ENSG00000175470	ENST00000455566:c.*15G>C,ENST00000482010:c.*1256G>C,ENST00000422256:c.*284G>C	NA	NA	NA	NA	10q26.3	NA	NA	NA	NA	rs7894	0.34	0.34	0.32	0.314696	0.2644	0.4524	0.2622	0.2874	0.2986	0.27	0.46	0.29	0.33	0.3079	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.049762	NA	NA	0.262055	0.273799	NA	0.239	NA	3.4989784
1302	11	6890901	6890901	A	G	upstream	OR10A2	NA	NA	NA	upstream	ENSG00000170790	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs4758140	0.14	0.14	0.144	0.150958	0.168	0.1736	0.098	0.0779	0.2464	0.17	0.17	0.11	0.07	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.501741	NA	NA	NA	NA	NA	0.08	NA	3.4986666
1302	11	6891985	6891985	A	G	downstream	OR10A2	NA	NA	NA	downstream	ENSG00000170790	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs72923107	0.13	0.13	0.135	0.146366	0.168	0.1736	0.098	0.0598	0.2474	0.17	0.17	0.11	0.05	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.850835	NA	NA	NA	NA	NA	0.08	NA	3.4986666
1302	16	89592690	89592690	G	A	intronic	SPG7	NA	NA	NA	intronic	ENSG00000197912	NA	NA	NA	NA	NA	16q24.3	NA	NA	NA	NA	rs3935626	0.11	0.11	0.104	0.103435	0.1571	0.1121	0.1138	0.0098	0.1585	0.16	0.13	0.12	0.02	0.1487	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.726317	NA	NA	0.195581	0.037534	NA	0.094	NA	3.498619
1302	7	111958339	111958339	T	A	intronic	ZNF277	NA	NA	NA	intronic	ENSG00000198839	NA	NA	NA	NA	NA	7q31.1	NA	NA	NA	NA	rs3823515	0.22	0.22	0.211	0.23143	0.1461	0.1399	0.1297	0.4644	0.1708	0.15	0.13	0.13	0.48	0.1855	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.591011	NA	NA	0.169884	0.438039	NA	0.21	NA	3.498516
1302	15	52702699	52702699	T	C	intronic	MYO5A	NA	NA	NA	intronic	ENSG00000197535	NA	NA	NA	NA	NA	15q21.2	NA	NA	NA	NA	rs72623980	0.16	0.16	0.14	0.140375	0.1779	0.1597	0.1542	0.0809	0.1524	0.18	0.17	0.19	0.09	0.1524	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.731666	1.731666	NA	0.17126	0.095909	NA	0.152	NA	3.49844
1302	3	10167264	10167264	G	C	intronic	BRK1	NA	NA	NA	intronic	ENSG00000254999	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs67667957	0.19	0.19	0.19	0.206669	0.1461	0.0685	0.1772	0.3707	0.2106	0.15	0.1	0.18	0.38	0.1907	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.137928	NA	NA	0.164773	0.307354	NA	0.348	NA	3.498427
1302	4	103866480	103866480	G	A	intronic	SLC9B1	NA	NA	NA	intronic	ENSG00000164037	NA	NA	NA	Score=352;Name=lod=36	NA	4q24	NA	NA	NA	NA	rs3974494	0.56	0.56	0.536	0.564896	0.4891	0.5129	0.5418	0.7231	0.499	0.48	0.5	0.55	0.75	0.52	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.24905	NA	NA	0.492558	0.659555	NA	0.065	NA	3.498342
1302	12	48110551	48110551	A	C	intronic	ENDOU	NA	NA	NA	ncRNA_intronic	ENSG00000257433	NA	NA	NA	NA	NA	12q13.11	NA	NA	NA	NA	rs1233062	0.89	0.89	0.868	0.908147	0.835	0.9752	0.9207	0.9039	0.911	0.83	0.97	0.9	0.9	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.083798	NA	NA	NA	NA	NA	0.913	NA	3.4983333
1302	17	46456300	46456300	A	G	intronic	SKAP1	NA	NA	NA	ncRNA_intronic	ENSG00000266222	NA	NA	NA	NA	NA	17q21.32	NA	NA	NA	NA	rs4542696	0.75	0.75	0.757	0.747005	0.835	0.5367	0.7579	0.8215	0.7648	0.85	0.53	0.77	0.83	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.338332	NA	NA	NA	NA	NA	0.768	NA	3.4983333
1302	4	6062117	6062117	T	A	intronic	JAKMIP1	NA	NA	NA	intronic	ENSG00000152969	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs6852114	0.22	0.22	0.242	0.276957	0.1461	0.001	0.147	0.7065	0.2076	0.15	NA	0.13	0.66	0.1914	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.287615	NA	NA	0.164186	0.616432	NA	0.275	NA	3.498314
1302	15	56032519	56032519	G	A	intronic	PRTG	NA	NA	NA	intronic	ENSG00000166450	NA	NA	NA	NA	NA	15q21.3	NA	NA	NA	NA	rs10152116	0.26	0.26	0.214	0.205871	0.502	0.0169	0.4669	0.0151	0.1687	0.51	0.02	0.46	0.02	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-3.042566	NA	NA	NA	NA	NA	0.326	NA	3.498
1302	20	2996589	2996589	G	T	intronic	PTPRA	NA	NA	NA	intronic	ENSG00000132670	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs1178017	0.61	0.61	NA	0.657748	0.502	0.8244	0.5591	0.6899	0.6728	0.49	0.77	0.57	0.65	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.495573	NA	NA	NA	NA	NA	0.609	NA	3.498
1302	21	45969971	45969971	A	G	intronic	TSPEAR	NA	NA	NA	intronic	ENSG00000175894	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs8133293	0.41	0.41	0.357	0.452875	0.502	0.3254	0.4798	0.4236	0.5542	0.47	0.28	0.51	0.39	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.748202	NA	NA	NA	NA	NA	0.362	NA	3.498
1302	1	242156428	242156428	C	T	intergenic	EXO1,MAP1LC3C	dist=103187;dist=2364	NA	NA	upstream	ENSG00000213026	NA	NA	NA	NA	NA	1q43	NA	NA	NA	NA	rs142577030	0.03	0.03	0.028	0.053115	0.003	0.0575	0.0519	0.0726	0.0746	0.0026	0.05	0.03	0.07	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.948014	NA	NA	NA	NA	NA	0.022	NA	3.497
1302	4	165578891	165578891	A	C	ncRNA_intronic	MIR5684	NA	NA	NA	intergenic	ENSG00000223037,ENSG00000248162	dist=36902;dist=67571	NA	NA	NA	NA	4q32.3	NA	NA	NA	NA	rs1852765	0.54	0.54	0.532	0.497005	0.503	0.7411	0.4294	0.4856	0.3027	0.5	0.72	0.47	0.46	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.643543	NA	NA	NA	NA	NA	0.623	NA	3.497
1302	8	134025781	134025781	A	T	intronic	TG	NA	NA	NA	intronic	ENSG00000042832	NA	NA	NA	NA	NA	8q24.22	NA	NA	NA	NA	rs10105991	0.45	0.45	0.457	0.42512	0.503	0.1776	0.3775	0.7141	0.2434	0.51	0.17	0.43	0.7	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.153499	NA	NA	NA	NA	NA	NA	NA	3.497
1302	8	134025783	134025783	A	G	intronic	TG	NA	NA	NA	intronic	ENSG00000042832	NA	NA	NA	NA	NA	8q24.22	NA	NA	NA	NA	rs10105992	0.45	0.45	0.457	0.42512	0.503	0.1776	0.3775	0.7141	0.2434	0.51	0.17	0.43	0.7	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.51513	NA	NA	NA	NA	NA	NA	NA	3.497
1302	17	61560763	61560763	T	C	intronic	ACE	NA	NA	NA	intronic	ENSG00000159640	NA	NA	NA	NA	NA	17q23.3	NA	NA	NA	NA	rs4311	0.65	0.65	0.621	0.665735	0.503	0.6736	0.6268	0.795	0.6779	0.51	0.69	0.62	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.673036	NA	NA	NA	NA	NA	0.681	NA	3.497
1302	15	52725334	52725334	C	T	intronic	MYO5A	NA	NA	NA	intronic	ENSG00000197535	NA	NA	NA	NA	NA	15q21.2	NA	NA	NA	NA	rs11853875	0.16	0.16	0.138	0.141174	0.1789	0.1597	0.1585	0.0802	0.1534	0.18	0.17	0.2	0.08	0.1529	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.517867	2.517867	NA	0.171527	0.094992	NA	0.152	NA	3.496673
1302	1	43300921	43300921	C	G	intronic	ERMAP	NA	NA	NA	ncRNA_intronic	ENSG00000243153	NA	NA	NA	NA	NA	1p34.2	NA	NA	NA	NA	rs4660673	0.78	0.78	0.772	0.747604	0.837	0.5843	0.8573	0.7943	0.683	0.84	0.64	0.85	0.79	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.367212	NA	NA	NA	NA	NA	0.775	NA	3.4963333
1302	17	21208331	21208331	G	A	intronic	MAP2K3	NA	NA	NA	intronic	ENSG00000034152	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs1898407	0.34	0.34	0.259	NA	NA	NA	NA	NA	NA	0.37	0.16	0.34	0.48	0.3242	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.22888	NA	NA	0.179535	0.346119	NA	0.159	NA	3.496265
1302	12	52681733	52681733	A	C	intronic	KRT81	NA	NA	NA	intronic	ENSG00000170442,ENSG00000205426	NA	NA	NA	NA	NA	12q13.13	NA	Name=Pol2	NA	NA	rs7954186	0.43	0.43	0.423	0.45008	0.5169	0.1577	0.3833	0.677	0.4233	0.51	0.16	0.39	0.67	0.4723	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.244344	NA	NA	0.514651	0.658647	NA	0.543	NA	3.496149
1302	1	144854052	144854052	G	A	intronic	NBPF9,PDE4DIP	NA	NA	NA	intronic	ENSG00000178104	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs1698584	NA	NA	NA	0.503195	0.504	0.501	0.5029	0.5038	0.5041	NA	NA	NA	NA	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.365354	NA	NA	NA	NA	NA	0.101	NA	3.496
1302	1	146527879	146527879	A	G	intergenic	LOC728989,PRKAB2	dist=13280;dist=98806	NA	NA	ncRNA_intronic	ENSG00000227242	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs614763	0.4	0.4	0.402	0.378395	0.504	0.1657	0.353	0.5227	0.2914	0.51	0.16	0.39	0.51	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.521292	NA	NA	NA	NA	NA	0.486	NA	3.496
1302	2	62788568	62788568	A	C	intergenic	TMEM17,EHBP1	dist=54964;dist=112418	NA	NA	upstream	ENSG00000230595	NA	NA	NA	NA	NA	2p15	NA	NA	NA	NA	rs139806429	0.0009	0.0009	0.001	0.00139776	0.004	NA	NA	NA	0.0031	0.0026	NA	NA	NA	NA	0.0026	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.48946	NA	NA	NA	NA	NA	NA	NA	3.496
1302	2	131027329	131027329	C	A	intergenic	TUBA3E,CCDC115	dist=71295;dist=68487	NA	NA	upstream	ENSG00000237722	NA	NA	NA	NA	NA	2q21.1	NA	NA	NA	NA	rs146676770	0.05	0.05	0.018	0.0403355	0.004	NA	0.0245	0.1369	NA	0.03	0.02	0.05	0.13	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.366919	NA	NA	NA	NA	NA	0.007	NA	3.496
1302	5	32775047	32775047	G	T	intronic	NPR3	NA	NA	NA	intronic	ENSG00000113389	NA	NA	NA	NA	NA	5p13.3	NA	NA	NA	NA	rs1173743	0.61	0.61	0.616	0.623403	0.504	0.6349	0.536	0.7655	0.6043	0.51	0.63	0.53	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.262135	NA	NA	NA	NA	NA	0.58	NA	3.496
1302	20	207889	207889	G	A	upstream	DEFB129	NA	NA	NA	upstream	ENSG00000125903	NA	NA	NA	NA	NA	20p13	NA	NA	Name=2	NA	rs2298149	0.28	0.28	0.239	0.26857	0.3867	0.2798	0.3746	0.0333	0.3783	0.39	0.26	0.39	0.04	0.3716	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.463712	NA	NA	0.412442	0.090331	ID=COSN166454;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.167	NA	3.4959246
1302	14	22433866	22433866	C	T	intergenic	OR4E2,DAD1	dist=299628;dist=599941	NA	NA	intronic	ENSG00000211794	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs17182972	0.21	0.21	0.221	0.202676	0.171	0.2391	0.183	0.2761	0.1125	0.17	0.27	0.19	0.23	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.889551	NA	NA	NA	NA	ID=COSN164624;OCCURENCE=1(NS)	0.21	NA	3.4956667
1302	11	102822733	102822733	C	T	intronic	MMP13	NA	NA	NA	intronic	ENSG00000137745	NA	NA	NA	NA	NA	11q22.2	NA	NA	NA	NA	rs3819089	0.18	0.18	0.189	0.212859	0.172	0.2232	0.1167	0.1868	0.3476	0.17	0.21	0.12	0.18	0.1687	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.602237	NA	NA	0.163759	0.173025	NA	0.217	NA	3.495541
1302	6	145079197	145079197	T	C	intronic	UTRN	NA	NA	NA	intronic	ENSG00000152818	NA	NA	NA	NA	NA	6q24.2	NA	NA	NA	NA	rs9283116	0.61	0.61	0.617	0.645567	0.2505	0.8681	0.6225	0.9062	0.4867	0.26	0.86	0.57	0.9	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.418489	NA	NA	0.254088	0.773121	NA	0.449	NA	3.495412
1302	1	183711483	183711483	C	T	intronic	RGL1	NA	NA	NA	intronic	ENSG00000143344	NA	NA	NA	NA	NA	1q25.3	NA	NA	NA	NA	rs3820689	0.53	0.53	0.51	0.485623	0.505	0.7827	0.4179	0.2413	0.5378	0.51	0.82	0.45	0.29	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.451258	NA	NA	NA	NA	NA	0.435	NA	3.495
1302	1	205028915	205028915	C	T	intronic	CNTN2	NA	NA	NA	intronic	ENSG00000184144	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs10793725	0.28	0.28	0.256	0.216653	0.505	0.0526	0.2954	0.1188	0.1656	0.51	0.05	0.34	0.12	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.228774	NA	NA	NA	NA	NA	0.355	NA	3.495
1302	3	191107192	191107192	A	G	intronic	CCDC50	NA	NA	NA	intronic	ENSG00000152492	NA	NA	NA	NA	NA	3q28	NA	NA	NA	NA	rs436393	0.37	0.37	0.335	0.355232	0.505	0.3125	0.4236	0.146	0.4796	0.5	0.35	0.43	0.16	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.110777	NA	NA	NA	NA	NA	0.478	NA	3.495
1302	4	38022087	38022087	A	G	intronic	TBC1D1	NA	NA	NA	intronic	ENSG00000065882	NA	NA	NA	NA	NA	4p14	NA	NA	NA	NA	rs10015663	0.61	0.61	0.6	0.610623	0.505	0.63	0.4481	0.7837	0.5808	0.51	0.7	0.46	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.037982	NA	NA	NA	NA	NA	0.638	NA	3.495
1302	12	52941529	52941529	T	C	intronic	KRT71	NA	NA	NA	intronic	ENSG00000139648	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs4761929	0.24	0.24	0.206	0.199481	0.505	0.0169	0.2925	0.025	0.2434	0.5	0.01	0.34	0.04	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.551871	NA	NA	NA	NA	NA	0.326	NA	3.495
1302	13	24234369	24234369	G	T	intronic	TNFRSF19	NA	NA	NA	intronic	ENSG00000127863	NA	NA	NA	NA	NA	13q12.12	NA	NA	NA	NA	rs3751366	0.39	0.39	0.357	0.380391	0.505	0.2927	0.4481	0.239	0.4857	0.5	0.31	0.47	0.27	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.913777	NA	NA	NA	NA	NA	0.355	NA	3.495
1302	16	90093969	90093969	T	C	intronic	GAS8	NA	NA	NA	intronic	ENSG00000141013	NA	NA	NA	NA	NA	16q24.3	NA	NA	NA	NA	rs3743829	0.67	0.67	0.626	0.643371	0.505	0.9444	0.683	0.5174	0.6176	0.52	0.97	0.64	0.57	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.058428	NA	NA	NA	NA	NA	0.638	NA	3.495
1302	21	38528866	38528866	A	G	intronic	TTC3	NA	NA	NA	intronic	ENSG00000182670	NA	NA	NA	NA	NA	21q22.13	NA	NA	NA	NA	rs2835635	NA	NA	0.573	0.618211	0.505	0.62	0.6571	0.677	0.6258	NA	NA	NA	NA	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.193507	NA	NA	NA	NA	NA	0.688	NA	3.495
1303	10	115966147	115966147	C	G	intronic	TDRD1	NA	NA	NA	intronic	ENSG00000095627	NA	NA	NA	NA	NA	10q25.3	NA	NA	NA	NA	rs17091424	0.19	0.19	0.191	0.174121	0.2545	0.0605	0.2233	0.2186	0.1135	0.25	0.06	0.24	0.23	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.051223	NA	NA	0.250786	0.211705	NA	0.13	NA	3.494714
1303	4	111474659	111474659	C	A	intronic	ENPEP	NA	NA	NA	intronic	ENSG00000138792	NA	NA	NA	NA	NA	4q25	NA	NA	NA	NA	rs12501626	0.18	0.18	0.153	0.182907	0.1581	0.255	0.1873	0.1195	0.2168	0.17	0.24	0.16	0.13	0.1813	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.444133	NA	NA	0.16593	0.132773	NA	0.123	NA	3.49467
1303	15	78764285	78764285	A	G	intronic	IREB2	NA	NA	NA	intronic	ENSG00000136381	NA	NA	NA	NA	NA	15q25.1	NA	NA	NA	NA	rs3817092	0.16	0.16	0.161	0.148363	0.1809	0.1657	0.1052	0.1256	0.1585	0.18	0.15	0.12	0.17	0.1568	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.817863	NA	NA	0.167637	0.147489	NA	0.123	NA	3.494663
1303	14	21967133	21967133	C	A	UTR3	TOX4	NM_014828:c.*2369C>A	NA	NA	UTR3	ENSG00000092203	ENST00000405508:c.*2369C>A,ENST00000262709:c.*2369C>A	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs1061027	0.19	0.19	0.166	0.191893	0.2813	0.2113	0.1599	0.0416	0.3057	0.28	0.21	0.18	0.05	0.2612	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.510852	NA	NA	0.296279	0.084657	NA	0.152	NA	3.4945544
1303	10	105967624	105967624	C	T	intronic	WDR96	NA	NA	NA	intronic	ENSG00000197748	NA	NA	NA	NA	NA	10q25.1	NA	NA	NA	NA	rs11191948	0.1	0.1	0.106	0.0872604	0.1978	0.003	0.0994	0.0431	0.1115	0.21	0.0017	0.12	0.04	0.1348	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.106198	NA	NA	0.172907	0.058783	NA	0.036	NA	3.494493
1303	17	16830287	16830287	T	C	intergenic	KRT16P2,TNFRSF13B	dist=94140;dist=12111	NA	NA	ncRNA_intronic	ENSG00000128438	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs3751996	0.65	0.65	0.622	0.680911	0.506	0.9405	0.6369	0.5545	0.7955	0.52	0.93	0.6	0.58	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.791727	NA	NA	NA	NA	NA	0.558	NA	3.494
1303	5	78340062	78340062	T	C	intronic	DMGDH	NA	NA	NA	intronic	ENSG00000132837	NA	NA	NA	NA	NA	5q14.1	NA	NA	NA	NA	rs248384	0.61	0.61	0.6	0.614417	0.506	0.7798	0.5879	0.6241	0.5613	0.5	0.78	0.61	0.58	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.547082	NA	NA	NA	NA	NA	0.551	NA	3.494
1303	8	67970243	67970243	A	G	intronic	COPS5	NA	NA	NA	intronic	ENSG00000121022	NA	NA	NA	NA	NA	8q13.1	NA	NA	NA	NA	rs6997490	0.65	0.65	0.68	0.678514	0.506	0.6448	0.5447	0.9735	0.5869	0.51	0.64	0.56	0.95	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.326141	NA	NA	NA	NA	NA	0.696	NA	3.494
1303	11	68831293	68831293	C	G	intronic	TPCN2	NA	NA	NA	intronic	ENSG00000162341	NA	NA	NA	NA	NA	11q13.3	NA	NA	NA	NA	rs11228472	0.35	0.35	0.323	0.292332	0.506	0.2877	0.3199	0.174	0.2178	0.49	0.29	0.35	0.21	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.156751	NA	NA	NA	NA	NA	0.304	NA	3.494
1303	12	52939994	52939994	T	C	intronic	KRT71	NA	NA	NA	intronic	ENSG00000139648	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs11170171	0.39	0.39	0.34	0.326877	0.506	0.5	0.4712	0.0272	0.2669	0.5	0.47	0.49	0.05	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.068857	NA	NA	NA	NA	NA	0.384	NA	3.494
1303	12	52942694	52942694	C	T	intronic	KRT71	NA	NA	NA	intronic	ENSG00000139648	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs3803085	0.39	0.39	0.344	0.326877	0.506	0.499	0.4726	0.0272	0.2669	0.5	0.47	0.49	0.05	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.97547	NA	NA	NA	NA	NA	0.384	NA	3.494
1303	22	45782646	45782646	C	T	intronic	SMC1B	NA	NA	NA	intronic	ENSG00000077935	NA	NA	NA	NA	NA	22q13.31	NA	NA	NA	NA	rs136591	0.65	0.65	0.651	0.709665	0.506	0.7014	0.5346	0.9493	0.728	0.49	0.66	0.57	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.318188	NA	NA	NA	NA	NA	0.797	NA	3.494
1303	2	113513504	113513504	A	G	intronic	CKAP2L	NA	NA	NA	intronic	ENSG00000169607	NA	NA	NA	NA	NA	2q13	NA	NA	Name=2	NA	rs4848298	0.46	0.46	0.413	0.422324	0.507	0.6895	0.5519	0.056	0.4632	0.5	0.7	0.54	0.06	0.4954	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.624283	NA	NA	0.503953	0.125738	NA	0.435	NA	3.493647
1303	5	58476232	58476232	G	A	intronic	PDE4D	NA	NA	NA	intronic	ENSG00000113448	NA	NA	NA	NA	NA	5q11.2	NA	NA	NA	NA	rs11749543	0.17	0.17	0.178	0.159744	0.163	0.1101	0.0893	0.236	0.1544	0.17	0.14	0.11	0.26	0.1889	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.885278	NA	NA	0.154545	0.228881	NA	0.116	NA	3.493555
1303	19	19359500	19359500	C	G	intronic	NCAN	NA	NA	NA	intronic	ENSG00000130287	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs10423874	0.23	0.23	0.244	0.244209	0.166	0.1081	0.147	0.4826	0.2117	0.15	0.12	0.17	0.5	0.1818	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.561612	1.561612	NA	0.158953	0.428734	NA	0.355	NA	3.493247
1303	1	53175099	53175099	A	G	intergenic	SELRC1,ZYG11B	dist=11061;dist=17032	NA	NA	ncRNA_exonic	ENSG00000233664	NA	NA	NA	NA	NA	1p32.3	NA	NA	NA	NA	rs12726160	0.32	0.32	0.306	0.317492	0.507	0.0179	0.3213	0.3502	0.3845	0.49	0.02	0.37	0.35	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.035304	NA	NA	NA	NA	NA	0.304	NA	3.493
1303	3	31725691	31725691	T	C	intronic	OSBPL10	NA	NA	NA	intronic	ENSG00000144645	NA	NA	NA	NA	NA	3p23	NA	NA	NA	NA	rs2278960	0.65	0.65	0.677	0.655551	0.507	0.7004	0.4798	0.9418	0.5	0.52	0.69	0.48	0.91	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.212638	NA	NA	NA	NA	NA	0.652	NA	3.493
1303	4	5863032	5863032	G	A	intronic	CRMP1	NA	NA	NA	intronic	ENSG00000072832	NA	NA	NA	NA	NA	4p16.2	NA	NA	NA	NA	rs13130069	0.45	0.45	0.424	0.408147	0.507	0.7649	0.4135	0.0159	0.4652	0.51	0.75	0.43	0.03	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.715117	NA	NA	NA	NA	NA	0.449	NA	3.493
1303	6	19613120	19613120	A	G	intergenic	MIR548A1,ID4	dist=1041009;dist=224481	NA	NA	ncRNA_exonic	ENSG00000214012	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs1936907	0.45	0.45	0.404	0.472045	0.507	0.2857	0.4813	0.615	0.4284	0.5	0.25	0.5	0.59	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.033446	NA	NA	NA	NA	NA	0.638	NA	3.493
1303	7	2405885	2405885	C	A	intronic	EIF3B	NA	NA	NA	intronic	ENSG00000106263	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs2286204	0.48	0.48	0.44	0.410144	0.507	0.7232	0.5778	0.0431	0.365	0.53	0.74	0.57	0.05	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.038502	NA	NA	NA	NA	NA	0.304	NA	3.493
1303	7	100607642	100607642	C	T	intergenic	ACHE,MUC12	dist=114101;dist=5262	NA	NA	ncRNA_intronic	ENSG00000225946	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs4989164	NA	NA	NA	0.509185	0.507	0.499	0.5202	0.5008	0.5256	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.205423	NA	NA	NA	NA	NA	NA	NA	3.493
1303	7	100607646	100607646	T	C	intergenic	ACHE,MUC12	dist=114105;dist=5258	NA	NA	ncRNA_intronic	ENSG00000225946	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs4989163	NA	NA	NA	0.509185	0.507	0.499	0.5202	0.5008	0.5256	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.595937	NA	NA	NA	NA	NA	NA	NA	3.493
1303	11	68830226	68830226	G	A	intronic	TPCN2	NA	NA	NA	intronic	ENSG00000162341	NA	NA	NA	NA	NA	11q13.3	NA	NA	NA	NA	rs10792015	0.4	0.4	0.425	0.357228	0.507	0.2877	0.3415	0.4077	0.2178	0.49	0.29	0.37	0.42	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.833712	NA	NA	NA	NA	NA	0.406	NA	3.493
1303	16	2259766	2259766	A	G	intronic	BRICD5	NA	NA	NA	intronic	ENSG00000182685	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs26858	0.6	0.6	0.568	0.591454	0.507	0.621	0.5648	0.6702	0.5603	0.51	0.63	0.55	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.484911	NA	NA	NA	NA	NA	0.536	NA	3.493
1303	19	54687334	54687334	C	G	intronic	MBOAT7	NA	NA	NA	intronic	ENSG00000125505	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs254283	0.42	0.42	0.418	0.430112	0.507	0.2817	0.3862	0.4024	0.5726	0.51	0.3	0.39	0.45	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.1835	NA	NA	NA	NA	NA	0.543	NA	3.493
1303	4	170987636	170987636	A	G	intronic	AADAT	NA	NA	NA	intronic	ENSG00000109576	NA	NA	NA	Score=343;Name=lod=33	NA	4q33	NA	NA	NA	NA	rs1480544	0.7	0.7	0.716	0.735423	0.4493	0.9911	0.5259	0.8941	0.7004	0.43	0.99	0.52	0.89	0.5744	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.102478	NA	NA	0.483488	0.838175	NA	0.71	NA	3.492812
1303	12	100717260	100717260	A	T	intronic	SCYL2	NA	NA	NA	intronic	ENSG00000136021	NA	NA	NA	NA	NA	12q23.1	NA	NA	NA	NA	rs11110340	0.08	0.08	0.079	0.0754792	0.1998	0.003	0.0994	0.0068	0.0982	0.18	0.0035	0.09	0.01	0.1304	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.602988	NA	NA	0.177333	0.035893	NA	0.094	NA	3.492467
1303	14	101442793	101442793	T	C	upstream;downstream	SNORD114-19;SNORD114-18	NA	NA	NA	ncRNA_intronic	ENSG00000271417	NA	NA	NA	NA	NA	14q32.31	NA	NA	NA	NA	rs12895798	0.13	0.13	0.119	0.105831	0.2445	0.0635	0.1383	0.0106	0.1125	0.24	0.07	0.17	0.01	0.1739	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.897402	NA	NA	0.255902	0.057078	NA	0.225	NA	3.4923646
1303	5	169702390	169702390	C	A	intronic	LCP2	NA	NA	NA	intronic	ENSG00000043462	NA	NA	NA	NA	NA	5q35.1	Score=799;Name=V$SRF_01	NA	NA	NA	rs2271146	0.33	0.33	0.311	0.3127	0.5408	0.0714	0.3991	0.2239	0.3855	0.53	0.08	0.44	0.23	0.4392	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.918128	NA	NA	0.527657	0.259761	NA	0.333	NA	3.492343
1303	1	144854412	144854412	A	C	intronic	NBPF9,PDE4DIP	NA	NA	NA	intronic	ENSG00000178104	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs2258448	NA	NA	NA	0.506789	0.508	0.5188	0.5014	0.5008	0.5051	NA	NA	NA	NA	NA	0.087	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.803268	NA	NA	NA	NA	NA	0.087	NA	3.492
1303	4	40350763	40350763	T	C	intronic	CHRNA9	NA	NA	NA	intronic	ENSG00000174343	NA	NA	NA	NA	NA	4p14	NA	NA	NA	NA	rs10029872	0.52	0.52	0.499	0.509784	0.508	0.7946	0.4582	0.2542	0.6002	0.52	0.79	0.44	0.27	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.597059	NA	NA	NA	NA	NA	0.377	NA	3.492
1303	11	60783108	60783108	C	T	intronic	CD6	NA	NA	NA	intronic	ENSG00000013725	NA	NA	NA	NA	NA	11q12.2	NA	NA	NA	NA	rs2074229	0.6	0.6	0.557	0.594649	0.508	0.8264	0.6974	0.3442	0.7106	0.52	0.85	0.65	0.39	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.596014	NA	NA	NA	NA	NA	0.638	NA	3.492
1303	20	3008239	3008239	C	T	intronic	PTPRA	NA	NA	NA	intronic	ENSG00000132670	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs613309	0.7	0.7	0.694	0.708466	0.508	0.8978	0.7161	0.6959	0.7311	0.52	0.92	0.72	0.69	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.993313	NA	NA	NA	NA	NA	0.638	NA	3.492
1303	18	59203707	59203707	G	A	intronic	CDH20	NA	NA	NA	intronic	ENSG00000101542	NA	NA	NA	NA	NA	18q21.33	NA	NA	NA	NA	rs62097360	0.12	0.12	0.116	0.103634	0.1958	0.0665	0.1066	0.0265	0.1493	0.19	0.08	0.15	0.03	0.136	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.444789	NA	NA	0.176628	0.045166	NA	0.065	NA	3.491572
1303	10	26781355	26781355	T	C	intronic	APBB1IP	NA	NA	NA	intronic	ENSG00000077420	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs1775245	0.14	0.14	0.124	0.123203	0.1799	0.004	0.1571	0.1967	0.0644	0.18	0.01	0.16	0.2	0.1527	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.544615	1.544615	NA	0.176163	0.182932	NA	0.109	NA	3.491237
1303	2	231738318	231738318	T	C	intronic	ITM2C	NA	NA	NA	intronic	ENSG00000135916	NA	NA	NA	NA	NA	2q37.1	NA	Name=ZEB1_(SC-25388)	NA	NA	rs3816150	0.54	0.54	0.498	0.510383	0.505	0.8155	0.5331	0.2277	0.5675	0.51	0.82	0.49	0.28	0.5187	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.26297	NA	NA	0.485109	0.250568	NA	0.399	NA	3.491191
1303	5	127625559	127625559	T	C	intronic	FBN2	NA	NA	NA	intronic	ENSG00000138829	NA	NA	NA	NA	NA	5q23.3	NA	NA	NA	NA	rs56131649	0.14	0.14	0.118	0.144169	0.1511	0.1687	0.2695	0.0234	0.1861	0.15	0.17	0.21	0.03	0.1968	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.241384	NA	NA	0.160926	0.058783	NA	0.101	NA	3.491174
1303	1	12854713	12854713	G	T	intronic	PRAMEF1	NA	NA	NA	intronic	ENSG00000116721	NA	NA	NA	NA	NA	1p36.21	NA	NA	NA	NA	rs11121979	0.46	0.46	0.459	0.429513	0.5089	0.2718	0.5605	0.4478	0.3926	0.53	0.3	0.56	0.46	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.820714	NA	NA	NA	NA	NA	0.101	NA	3.4911
1303	1	18467153	18467153	C	T	intronic	IGSF21	NA	NA	NA	intronic	ENSG00000117154	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs2005010	0.46	0.46	0.437	0.46226	0.5089	0.5208	0.5216	0.2716	0.5695	0.5	0.55	0.52	0.25	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.595545	NA	NA	NA	NA	NA	0.435	NA	3.4911
1303	2	62576375	62576375	G	C	intergenic	B3GNT2,TMEM17	dist=124509;dist=150981	NA	NA	ncRNA_exonic	ENSG00000270335	NA	NA	NA	NA	NA	2p15	NA	NA	NA	NA	rs3935828	0.4	0.4	0.418	0.392572	0.5089	0.3026	0.3444	0.3268	0.4888	0.52	0.36	0.35	0.31	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.039678	3.039678	NA	NA	NA	NA	0.514	NA	3.4911
1303	2	136616754	136616754	C	T	intronic	MCM6	NA	NA	NA	intronic	ENSG00000076003	NA	NA	NA	NA	NA	2q21.3	NA	NA	NA	NA	rs182549	0.23	0.23	0.195	0.163339	0.5089	NA	0.2205	0.0272	0.1196	0.52	NA	0.26	0.04	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.938007	NA	NA	NA	NA	NA	0.304	NA	3.4911
1303	12	30814259	30814259	C	T	intronic	IPO8	NA	NA	NA	intronic	ENSG00000133704	NA	NA	NA	NA	NA	12p11.21	NA	NA	NA	NA	rs10771753	0.49	0.49	0.512	0.49401	0.5089	0.4484	0.2925	0.7012	0.3885	0.52	0.45	0.29	0.64	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.308442	NA	NA	NA	NA	NA	0.362	NA	3.4911
1303	11	13733401	13733401	C	T	intronic	FAR1	NA	NA	NA	intronic	ENSG00000197601	NA	NA	NA	NA	NA	11p15.2	NA	NA	NA	NA	rs7934570	0.12	0.12	0.105	0.148562	0.171	0.0397	0.134	0.1301	0.273	0.16	0.03	0.15	0.15	0.1623	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.580531	NA	NA	0.175729	0.125399	NA	0.116	NA	3.490971
1303	17	1680002	1680002	T	C	exonic	SERPINF1	NA	synonymous SNV	SERPINF1:NM_002615:exon7:c.T963C:p.Y321Y	exonic	ENSG00000132386	NA	synonymous SNV	ENSG00000132386:ENST00000573763:exon3:c.T357C:p.Y119Y,ENSG00000132386:ENST00000254722:exon7:c.T963C:p.Y321Y	NA	NA	17p13.3	NA	NA	NA	NA	rs6828	0.79	0.79	0.813	0.776757	0.7386	0.7758	0.7565	0.9198	0.638	0.76	0.78	0.71	0.92	0.7292	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.771448	NA	NA	0.707907	0.891512	NA	0.746	NA	3.4909596
1303	20	3778433	3778433	T	C	intronic	CDC25B	NA	NA	NA	intronic	ENSG00000101224	NA	NA	NA	NA	NA	20p13	NA	Name=ZNF263	NA	NA	rs3746644	0.64	0.64	0.638	0.652556	0.4771	0.7044	0.6628	0.8434	0.5143	0.48	0.71	0.6	0.84	0.5487	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.53652	NA	NA	0.483252	0.780073	NA	0.638	NA	3.490948
1303	1	21896767	21896767	C	T	intronic	ALPL	NA	NA	NA	intronic	ENSG00000162551	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs1256328	0.15	0.15	0.157	0.155551	0.1809	0.1845	0.121	0.09	0.2127	0.17	0.18	0.14	0.09	0.1643	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.796454	NA	NA	0.16407	0.096232	NA	0.203	NA	3.49073
1303	6	26466225	26466225	A	C	intronic	BTN2A1	NA	NA	NA	intronic	ENSG00000112763	NA	NA	NA	NA	NA	6p22.2	NA	Name=CEBPB	NA	NA	rs1977198	0.46	0.46	0.448	0.459065	0.4851	0.7044	0.5476	0.0961	0.6074	0.5	0.69	0.49	0.11	0.5091	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.360633	NA	NA	0.515233	0.163414	NA	0.297	NA	3.490567
1303	13	110866065	110866065	C	T	intronic	COL4A1	NA	NA	NA	intronic	ENSG00000187498	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs3737328	0.25	0.25	0.258	0.226438	0.2684	0.2897	0.1888	0.202	0.1779	0.27	0.31	0.19	0.2	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.280213	NA	NA	0.241043	0.209538	NA	0.21	NA	3.490557
1303	5	1394815	1394815	A	G	UTR3	SLC6A3	NM_001044:c.*35T>C	NA	NA	UTR3	ENSG00000142319	ENST00000270349:c.*35T>C,ENST00000453492:c.*35T>C,ENST00000512002:c.*35T>C	NA	NA	NA	NA	5p15.33	NA	NA	NA	NA	rs1042098	0.28	0.28	0.286	0.295128	0.3141	0.1081	0.2464	0.5	0.226	0.3	0.1	0.28	0.46	0.2545	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.953535	NA	NA	0.274186	0.44099	NA	0.21	NA	3.4905474
1303	14	101431216	101431216	C	G	downstream	SNORD114-8	NA	NA	NA	ncRNA_intronic	ENSG00000232018	NA	NA	NA	NA	NA	14q32.31	NA	NA	NA	NA	rs34144313	0.13	0.13	0.125	0.105831	0.2455	0.0625	0.1383	0.0106	0.1125	0.24	0.07	0.17	0.01	0.174	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.975424	NA	NA	0.256655	0.057078	NA	0.225	NA	3.4905116
1303	6	57398335	57398335	A	T	intronic	PRIM2	NA	NA	NA	intronic	ENSG00000146143	NA	NA	NA	NA	NA	6p11.2	NA	NA	NA	NA	rs4715745	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5095	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.670583	NA	NA	NA	NA	NA	0.449	NA	3.4905
1303	7	1474799	1474799	A	G	intronic	MICALL2	NA	NA	NA	intronic	ENSG00000164877	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs67046940	0.24	0.24	0.208	0.251597	0.1441	0.0288	0.3084	0.5492	0.1493	0.14	0.04	0.31	0.58	0.1997	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.130684	NA	NA	0.165853	0.47592	NA	0.29	NA	3.490347
1303	19	37966923	37966923	C	T	intronic	ZNF570	NA	NA	NA	intronic	ENSG00000171827	NA	NA	NA	NA	NA	19q13.12	NA	NA	NA	NA	rs4801803	0.24	0.24	0.224	0.256989	0.1511	0.248	0.1974	0.3018	0.3569	0.15	0.28	0.22	0.36	0.1971	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.81282	2.81282	NA	0.161512	0.266682	NA	0.232	NA	3.490288
1303	6	33648097	33648097	A	G	intronic	ITPR3	NA	NA	NA	intronic	ENSG00000096433	NA	NA	NA	NA	NA	6p21.31	NA	NA	NA	NA	rs9469554	0.12	0.12	0.1	0.100839	0.1789	0.0526	0.1686	0.0635	0.0726	0.18	0.06	0.15	0.05	0.1514	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0895	NA	NA	0.179419	0.076033	NA	0.101	NA	3.490281
1303	2	33623306	33623306	C	T	intronic	LTBP1	NA	NA	NA	intronic	ENSG00000049323	NA	NA	NA	NA	NA	2p22.3	NA	NA	NA	NA	rs2034693	0.51	0.51	0.5	0.482228	0.5099	0.6181	0.4308	0.4319	0.4182	0.51	0.61	0.41	0.46	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.245441	NA	NA	NA	NA	NA	0.478	NA	3.4901
1303	3	97605677	97605677	A	G	intronic	CRYBG3	NA	NA	NA	intronic	ENSG00000080200	NA	NA	NA	NA	NA	3q11.2	NA	NA	NA	NA	rs831902	0.51	0.51	0.491	0.482628	0.5099	0.6925	0.5072	0.2625	0.5184	0.52	0.73	0.45	0.26	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.244823	NA	NA	NA	NA	NA	0.464	NA	3.4901
1303	10	37283882	37283882	G	A	intergenic	FZD8,ANKRD30A	dist=1353520;dist=130903	NA	NA	upstream	ENSG00000225355	NA	NA	NA	NA	NA	10p11.21	NA	NA	NA	NA	rs73238696	0.04	0.04	0.056	0.0515176	0.0099	NA	0.0159	0.1793	NA	0.01	NA	0.01	0.16	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.511228	NA	NA	NA	NA	NA	0.043	NA	3.4901
1303	10	124338946	124338946	G	T	intronic	DMBT1	NA	NA	NA	intronic	ENSG00000187908	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs1969619	0.51	0.51	0.501	0.494209	0.5099	0.5218	0.5202	0.4841	0.4448	0.51	0.49	0.54	0.52	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.555111	NA	NA	NA	NA	NA	0.565	NA	3.4901
1303	17	600502	600502	C	T	intronic	VPS53	NA	NA	NA	intronic	ENSG00000141252	NA	NA	NA	NA	NA	17p13.3	NA	NA	NA	NA	rs2657633	0.31	0.31	0.283	0.311102	0.5099	0.119	0.4049	0.0832	0.546	0.51	0.13	0.42	0.12	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.322287	1.322287	NA	NA	NA	NA	0.297	NA	3.4901
1303	17	6831407	6831407	T	G	intergenic	ALOX12P2,LOC100506713	dist=27739;dist=57035	NA	NA	ncRNA_exonic	ENSG00000262503	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs311743	0.53	0.53	0.533	0.556709	0.5099	0.4851	0.389	0.6853	0.6237	0.51	0.46	0.46	0.69	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.035643	NA	NA	NA	NA	NA	0.536	NA	3.4901
1303	4	88533445	88533445	T	C	intronic	DSPP	NA	NA	NA	ncRNA_intronic	ENSG00000249001	NA	NA	NA	NA	NA	4q22.1	NA	NA	NA	NA	rs13131936	0.21	0.21	0.208	0.21865	0.2962	0.2391	0.2061	0.0703	0.3272	0.3	0.21	0.2	0.07	0.2585	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.484409	NA	NA	0.288664	0.096713	NA	0.261	NA	3.4899693
1303	17	37453485	37453485	T	C	intronic	FBXL20	NA	NA	NA	intronic	ENSG00000108306	NA	NA	NA	NA	NA	17q12	NA	NA	NA	NA	rs594794	0.23	0.23	0.208	0.229633	0.162	0.2431	0.2363	0.379	0.0787	0.16	0.23	0.22	0.35	0.1785	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.167695	NA	NA	0.16973	0.366031	NA	0.196	NA	3.48977
1303	6	170140184	170140184	T	C	downstream	TCTE3	NA	NA	NA	downstream	ENSG00000184786	NA	NA	NA	NA	NA	6q27	NA	NA	NA	NA	rs9383520	0.3	0.3	0.279	0.292532	0.1769	0.6419	0.366	0.1437	0.2004	0.17	0.62	0.32	0.12	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.05279	NA	NA	NA	NA	NA	0.188	NA	3.4897666
1303	12	130830906	130830906	C	T	intronic	PIWIL1	NA	NA	NA	intronic	ENSG00000125207	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs11060836	0.16	0.16	0.14	0.181909	0.1819	0.0833	0.0865	0.2602	0.2454	0.17	0.1	0.1	0.25	0.1647	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.234348	1.234348	NA	0.16407	0.213799	NA	0.196	NA	3.48933
1303	12	123799974	123799974	A	G	exonic	SBNO1	NA	synonymous SNV	SBNO1:NM_001167856:exon22:c.T3066C:p.G1022G,SBNO1:NM_018183:exon22:c.T3063C:p.G1021G	exonic	ENSG00000139697	NA	synonymous SNV	ENSG00000139697:ENST00000267176:exon22:c.T3063C:p.G1021G,ENSG00000139697:ENST00000420886:exon22:c.T3066C:p.G1022G,ENSG00000139697:ENST00000602398:exon23:c.T3066C:p.G1022G,ENSG00000139697:ENST00000602750:exon23:c.T3063C:p.G1021G	NA	NA	12q24.31	NA	NA	NA	NA	rs6488868	0.73	0.73	0.705	0.685104	0.7217	0.9544	0.6916	0.4523	0.68	0.71	0.96	0.69	0.5	0.7088	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.673555	NA	NA	0.74686	0.485928	NA	0.536	NA	3.4893066
1303	11	72290199	72290199	G	A	intronic	PDE2A	NA	NA	NA	intronic	ENSG00000186642	NA	NA	NA	NA	NA	11q13.4	NA	NA	NA	NA	rs11605051	0.33	0.33	0.325	0.314497	0.5109	0.2431	0.3184	0.1672	0.3824	0.49	0.22	0.37	0.18	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.304098	NA	NA	NA	NA	NA	0.355	NA	3.4891
1303	12	10313265	10313265	C	T	intronic	OLR1	NA	NA	NA	intronic	ENSG00000173391	NA	NA	NA	NA	NA	12p13.2	NA	NA	NA	NA	rs3736233	0.35	0.35	0.31	0.31869	0.5109	0.2381	0.5403	0.1732	0.2434	0.5	0.23	0.48	0.15	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.07136	NA	NA	NA	NA	NA	0.355	NA	3.4891
1303	16	55612918	55612918	T	A	intronic	LPCAT2	NA	NA	NA	intronic	ENSG00000087253	NA	NA	NA	NA	NA	16q12.2	NA	NA	NA	NA	rs4784549	0.65	0.65	0.662	0.689696	0.5109	0.7421	0.5144	0.8313	0.7526	0.49	0.73	0.55	0.85	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.001914	NA	NA	NA	NA	NA	0.717	NA	3.4891
1303	22	26891823	26891823	C	G	intronic	TFIP11	NA	NA	NA	intronic	ENSG00000100109	NA	NA	NA	NA	NA	22q12.1	NA	NA	NA	NA	rs4822729	0.45	0.45	0.434	0.41873	0.5109	0.5069	0.4481	0.3222	0.3425	0.52	0.46	0.44	0.33	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.104965	NA	NA	NA	NA	NA	0.384	NA	3.4891
1303	19	47342717	47342717	C	T	intronic	AP2S1	NA	NA	NA	intronic	ENSG00000042753	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs312186	0.32	0.32	0.307	0.359225	0.1282	0.503	0.3963	0.413	0.3497	0.13	0.47	0.35	0.43	0.2412	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.820883	NA	NA	0.141512	0.359283	NA	0.283	NA	3.489088
1303	7	100731829	100731829	T	C	exonic	TRIM56	NA	synonymous SNV	TRIM56:NM_030961:exon3:c.T1236C:p.A412A	exonic	ENSG00000169871	NA	synonymous SNV	ENSG00000169871:ENST00000306085:exon3:c.T1236C:p.A412A	NA	NA	7q22.1	NA	NA	NA	NA	rs6948536	0.72	0.72	0.77	0.708466	0.7455	0.5496	0.5418	0.9614	0.6104	0.75	0.57	0.61	0.95	0.6916	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.586019	NA	NA	0.740657	0.927667	ID=COSM1568188,COSM1568189;OCCURENCE=1(large_intestine)	0.732	NA	3.4889096
1303	8	3565900	3565900	C	T	intronic	CSMD1	NA	NA	NA	intronic	ENSG00000183117	NA	NA	NA	NA	NA	8p23.2	NA	NA	NA	NA	rs12674750	0.18	0.18	0.182	0.20607	0.1541	0.2391	0.1585	0.2163	0.2454	0.14	0.23	0.16	0.21	0.1896	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4932	NA	NA	0.167429	0.195696	NA	0.152	NA	3.488871
1303	4	66280171	66280171	C	T	intronic	EPHA5	NA	NA	NA	intronic	ENSG00000145242	NA	NA	NA	NA	NA	4q13.1	NA	NA	NA	NA	rs2305351	0.18	0.18	0.129	0.180911	0.172	0.2857	0.2997	0.0159	0.2209	0.16	0.28	0.25	0.02	0.1895	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.661689	NA	NA	0.149884	0.041307	ID=COSM149681;OCCURENCE=1(stomach)	0.261	NA	3.488616
1303	1	16378649	16378649	C	G	intronic	CLCNKB	NA	NA	NA	intronic	ENSG00000184908	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs2297726	0.16	0.16	0.141	0.16254	0.172	0.2877	0.147	0.0492	0.1881	0.17	0.25	0.12	0.07	0.1724	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.066221	NA	NA	0.167016	0.073082	NA	0.087	NA	3.488584
1303	14	24738379	24738379	T	C	intronic	RABGGTA	NA	NA	NA	intronic	ENSG00000100949	NA	NA	NA	NA	NA	14q12	NA	NA	NA	NA	rs59227799	0.14	0.14	0.097	0.140974	0.1531	0.003	0.3545	0.1475	0.1104	0.17	0.01	0.3	0.14	0.1979	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.230096	NA	NA	0.160472	0.136809	NA	0.109	NA	3.488528
1303	1	209779652	209779652	T	G	intronic	CAMK1G	NA	NA	NA	intronic	ENSG00000008118	NA	NA	NA	NA	NA	1q32.2	NA	NA	NA	NA	rs35498535	0.18	0.18	0.169	0.1873	0.1819	0.12	0.2032	0.3283	0.0603	0.17	0.12	0.14	0.31	0.161	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.348334	NA	NA	0.168953	0.295506	NA	0.109	NA	3.488147
1303	6	155561564	155561564	C	T	intronic	TIAM2	NA	NA	NA	intronic	ENSG00000146426	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs11751085	0.31	0.31	0.303	0.308706	0.5119	0.0099	0.33	0.3495	0.3374	0.5	0.01	0.36	0.35	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.882946	NA	NA	NA	NA	NA	0.5	NA	3.4881
1303	10	129864515	129864515	C	T	intronic	PTPRE	NA	NA	NA	intronic	ENSG00000132334	NA	NA	NA	NA	NA	10q26.2	NA	NA	NA	NA	rs10764743	0.44	0.44	0.43	0.420128	0.5119	0.4127	0.5072	0.2708	0.4734	0.51	0.42	0.54	0.29	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.091351	NA	NA	NA	NA	ID=COSN163827;OCCURENCE=1(breast)	0.435	NA	3.4881
1303	11	95520695	95520695	T	C	intronic	FAM76B	NA	NA	NA	intronic	ENSG00000077458	NA	NA	NA	NA	NA	11q21	NA	NA	NA	NA	rs1313288	0.57	0.57	0.56	0.575479	0.5119	0.3442	0.4942	0.9198	0.4714	0.51	0.39	0.54	0.9	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.531556	NA	NA	NA	NA	NA	0.587	NA	3.4881
1303	12	10313134	10313134	G	A	intronic	OLR1	NA	NA	NA	intronic	ENSG00000173391	NA	NA	NA	NA	NA	12p13.2	NA	NA	NA	NA	rs3736234	0.35	0.35	0.317	0.31889	0.5119	0.2381	0.5403	0.1732	0.2434	0.5	0.23	0.48	0.15	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.424236	1.424236	NA	NA	NA	NA	0.355	NA	3.4881
1303	15	98514282	98514282	A	G	intronic	ARRDC4	NA	NA	NA	intronic	ENSG00000140450	NA	NA	NA	NA	NA	15q26.3	NA	NA	NA	NA	rs62023730	0.49	0.49	0.483	0.495807	0.5119	0.5486	0.5303	0.3026	0.6616	0.52	0.56	0.51	0.34	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.052918	NA	NA	NA	NA	NA	0.536	NA	3.4881
1303	16	8992828	8992828	G	T	intronic	USP7	NA	NA	NA	intronic	ENSG00000187555	NA	NA	NA	NA	NA	16p13.2	NA	NA	NA	NA	rs2289109	0.44	0.44	0.445	0.428914	0.5119	0.5823	0.4193	0.2383	0.4499	0.51	0.58	0.4	0.21	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.22987	NA	NA	NA	NA	NA	0.377	NA	3.4881
1303	1	167817639	167817639	A	G	exonic	ADCY10	NA	synonymous SNV	ADCY10:NM_001167749:exon16:c.T1938C:p.G646G,ADCY10:NM_018417:exon19:c.T2397C:p.G799G	exonic	ENSG00000143199	NA	synonymous SNV	ENSG00000143199:ENST00000545172:exon16:c.T1938C:p.G646G,ENSG00000143199:ENST00000367848:exon19:c.T2121C:p.G707G,ENSG00000143199:ENST00000367851:exon19:c.T2397C:p.G799G	NA	NA	1q24.2	NA	NA	NA	NA	rs203795	0.81	0.81	0.814	0.822085	0.7137	0.8571	0.8372	0.9297	0.7413	0.71	0.84	0.81	0.93	0.7555	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.847489	NA	NA	0.709651	0.897413	ID=COSM424500;OCCURENCE=1(breast)	0.855	NA	3.4878156
1303	10	28409614	28409614	C	G	intronic	MPP7	NA	NA	NA	intronic	ENSG00000150054	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs7903192	0.39	0.39	0.36	0.400759	0.1252	0.7728	0.3919	0.3185	0.4182	0.13	0.86	0.35	0.29	0.2627	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.061178	NA	NA	0.124302	0.335225	NA	0.319	NA	3.487798
1303	15	52667450	52667450	T	C	intronic	MYO5A	NA	NA	NA	intronic	ENSG00000197535	NA	NA	NA	NA	NA	15q21.2	NA	NA	NA	NA	rs3816449	0.17	0.17	0.156	0.14996	0.1859	0.1716	0.1527	0.0983	0.1585	0.18	0.19	0.19	0.1	0.1556	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.247796	NA	NA	0.170914	0.10805	NA	0.174	NA	3.487586
1303	7	1474342	1474342	A	T	intronic	MICALL2	NA	NA	NA	intronic	ENSG00000164877	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs9986863	0.24	0.24	0.207	0.251398	0.1441	0.0288	0.3069	0.5492	0.1493	0.14	0.04	0.31	0.58	0.2031	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.162903	NA	NA	0.165698	0.475034	NA	0.297	NA	3.487102
1303	2	160076026	160076026	C	G	intronic	TANC1	NA	NA	NA	intronic	ENSG00000115183	NA	NA	NA	NA	NA	2q24.2	NA	NA	NA	NA	rs2303334	0.25	0.25	0.234	0.194888	0.5129	0.0476	0.2867	0.0234	0.1861	0.51	0.05	0.32	0.04	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.538127	NA	NA	NA	NA	NA	0.29	NA	3.4871
1303	2	160076077	160076077	T	A	intronic	TANC1	NA	NA	NA	intronic	ENSG00000115183	NA	NA	NA	NA	NA	2q24.2	NA	NA	NA	NA	rs2303335	0.25	0.25	0.234	0.194888	0.5129	0.0476	0.2867	0.0234	0.1861	0.51	0.05	0.32	0.04	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.885807	NA	NA	NA	NA	NA	0.268	NA	3.4871
1303	6	52660867	52660867	C	T	intronic	GSTA1	NA	NA	NA	intronic	ENSG00000243955	NA	NA	NA	NA	NA	6p12.2	NA	NA	NA	NA	rs2290757	0.48	0.48	0.409	0.465655	0.5129	0.6825	0.6239	0.1082	0.5644	0.51	0.69	0.6	0.12	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.471392	NA	NA	NA	NA	NA	0.449	NA	3.4871
1303	8	6973602	6973602	T	G	intergenic	DEFA5,LOC349196	dist=59343;dist=144539	NA	NA	upstream	ENSG00000216206	NA	NA	NA	NA	NA	8p23.1	NA	NA	NA	NA	rs28670605	0.05	0.05	0.055	0.0611022	0.0129	0.0109	0.0144	0.1906	0.0204	0.01	0.02	0.01	0.19	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.727924	NA	NA	NA	NA	NA	0.007	NA	3.4871
1303	8	120583148	120583148	G	A	intronic	ENPP2	NA	NA	NA	intronic	ENSG00000136960	NA	NA	NA	NA	NA	8q24.12	NA	NA	NA	NA	rs2305125	0.6	0.6	0.596	0.646965	0.5129	0.6171	0.6787	0.6422	0.7996	0.52	0.62	0.59	0.7	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.617443	NA	NA	NA	NA	NA	0.486	NA	3.4871
1303	11	1857930	1857930	G	A	intronic	SYT8	NA	NA	NA	intronic	ENSG00000149043	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs3741229	0.43	0.43	0.393	0.433307	0.5129	0.374	0.4424	0.3124	0.5695	0.52	0.4	0.47	0.31	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.214982	NA	NA	NA	NA	NA	0.362	NA	3.4871
1303	22	31664032	31664032	C	T	intronic	LIMK2	NA	NA	NA	intronic	ENSG00000182541	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs5997929	0.29	0.29	0.268	0.280551	0.5129	0.0685	0.3256	0.1619	0.3885	0.5	0.07	0.37	0.18	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.16535	NA	NA	NA	NA	NA	0.268	NA	3.4871
1303	16	20629514	20629514	C	A	intergenic	ACSM2B,ACSM1	dist=41819;dist=5045	NA	NA	intronic	ENSG00000005187	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs3883991	0.31	0.31	0.327	0.346446	0.1799	0.3482	0.1916	0.5431	0.3599	0.2	0.34	0.2	0.51	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.959594	NA	NA	NA	NA	NA	0.355	NA	3.4867667
1303	15	52708534	52708534	T	G	intronic	MYO5A	NA	NA	NA	intronic	ENSG00000197535	NA	NA	NA	NA	NA	15q21.2	NA	NA	NA	NA	rs11856752	0.16	0.16	0.153	0.146565	0.1779	0.1766	0.1542	0.0893	0.1554	0.18	0.19	0.19	0.09	0.1643	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.803261	NA	NA	0.171218	0.101381	NA	0.145	NA	3.486582
1303	1	34038006	34038006	T	C	intronic	CSMD2	NA	NA	NA	intronic	ENSG00000121904	NA	NA	NA	NA	NA	1p35.1	NA	NA	NA	NA	rs1493992	NA	NA	NA	0.521765	0.5139	0.4256	0.6643	0.5431	0.499	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.793569	NA	NA	NA	NA	NA	NA	NA	3.4861
1303	6	10514880	10514880	G	T	intergenic	MIR5689,GCNT2	dist=74853;dist=6688	NA	NA	ncRNA_exonic	ENSG00000216359	NA	NA	NA	NA	NA	6p24.3	NA	NA	NA	NA	rs647447	0.64	0.64	0.64	0.653754	0.5139	0.6528	0.5706	0.767	0.7045	0.52	0.67	0.56	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.376858	NA	NA	NA	NA	NA	0.63	NA	3.4861
1303	19	32899074	32899074	G	A	intronic	DPY19L3	NA	NA	NA	intronic	ENSG00000178904	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs741441	0.32	0.32	0.307	0.265974	0.5139	0.1746	0.3055	0.1097	0.2883	0.52	0.17	0.37	0.14	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.512104	NA	NA	NA	NA	NA	0.399	NA	3.4861
1303	21	44195374	44195374	G	A	intronic	PDE9A	NA	NA	NA	intronic	ENSG00000160191	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs9637296	0.16	0.16	0.149	0.180112	0.167	0.1002	0.1499	0.2012	0.2689	0.16	0.11	0.16	0.21	0.1772	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.251041	NA	NA	0.169767	0.201997	NA	0.152	NA	3.486033
1303	1	157718645	157718645	T	C	intronic	FCRL2	NA	NA	NA	intronic	ENSG00000132704	NA	NA	NA	NA	NA	1q23.1	NA	NA	NA	NA	rs2275233	0.21	0.21	0.197	0.197284	0.1968	0.25	0.1974	0.2496	0.0726	0.18	0.23	0.2	0.22	0.1595	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.327474	NA	NA	0.157674	0.22946	NA	0.232	NA	3.486026
1303	19	41798111	41798111	A	G	intronic	HNRNPUL1	NA	NA	NA	intronic	ENSG00000105323	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs3752705	0.24	0.24	0.246	0.240815	0.173	0.3482	0.1974	0.2905	0.1636	0.17	0.33	0.22	0.28	0.182	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.389794	NA	NA	0.159535	0.276668	NA	0.225	NA	3.485465
1303	13	39430443	39430443	G	A	intronic	FREM2	NA	NA	NA	intronic	ENSG00000150893	NA	NA	NA	NA	NA	13q13.3	NA	NA	NA	NA	rs9548510	0.22	0.22	0.21	0.273163	0.1421	0.0952	0.3098	0.5129	0.2413	0.13	0.1	0.26	0.5	0.2126	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.336272	1.336272	NA	0.16	0.488425	NA	0.283	NA	3.4853
1303	22	18918760	18918760	T	C	intronic	PRODH	NA	NA	NA	intronic	ENSG00000100033	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs67625420	0.18	0.18	0.187	0.186701	0.1769	0.0188	0.1643	0.3638	0.1462	0.17	0.02	0.18	0.39	0.1659	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.51435	NA	NA	0.172068	0.327578	NA	0.333	NA	3.485132
1303	1	15832383	15832383	G	T	intronic	CASP9	NA	NA	NA	intronic	ENSG00000132906	NA	NA	NA	NA	NA	1p36.21	NA	NA	NA	NA	rs1800614	0.6	0.6	0.612	0.584665	0.5149	0.6538	0.4986	0.739	0.4376	0.54	0.63	0.5	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.789596	1.789596	NA	NA	NA	NA	0.442	NA	3.4851
1303	1	15834491	15834491	G	A	intronic	CASP9	NA	NA	NA	intronic	ENSG00000132906	NA	NA	NA	NA	NA	1p36.21	NA	NA	NA	NA	rs4646032	0.6	0.6	0.608	0.584265	0.5149	0.6538	0.4986	0.739	0.4356	0.54	0.63	0.5	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.256981	NA	NA	NA	NA	NA	0.435	NA	3.4851
1303	1	70996698	70996698	G	A	intergenic	CTH,PTGER3	dist=91164;dist=321338	NA	NA	ncRNA_exonic	ENSG00000233020	NA	NA	NA	NA	NA	1p31.1	NA	NA	NA	NA	rs2807905	0.34	0.34	0.332	0.326677	0.5149	0.1111	0.3213	0.3056	0.3875	0.53	0.09	0.37	0.33	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.183103	NA	NA	NA	NA	NA	0.275	NA	3.4851
1303	6	29149605	29149605	G	T	intergenic	OR2J2,OR14J1	dist=7254;dist=124862	NA	NA	ncRNA_exonic	ENSG00000224233	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs3116818	0.36	0.36	0.319	0.316693	0.5149	0.3512	0.4035	0.0408	0.3885	0.54	0.35	0.42	0.04	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.240675	NA	NA	NA	NA	NA	0.239	NA	3.4851
1303	9	37708307	37708307	A	C	intronic	FRMPD1	NA	NA	NA	intronic	ENSG00000070601,ENSG00000255872	NA	NA	NA	NA	NA	9p13.2	NA	NA	NA	NA	rs2296555	0.58	0.58	0.529	0.577276	0.5149	0.7778	0.6023	0.4985	0.5235	0.52	0.79	0.57	0.46	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.202717	NA	NA	NA	NA	NA	0.464	NA	3.4851
1303	10	30978274	30978274	T	C	intergenic	LYZL2,ZNF438	dist=59627;dist=155291	NA	NA	ncRNA_intronic	ENSG00000234814	NA	NA	NA	NA	NA	10p11.23	NA	NA	NA	NA	rs4988769	NA	NA	0.196	0.537141	0.5149	0.503	0.5303	0.5688	0.5573	NA	NA	NA	NA	NA	0.065	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.022115	NA	NA	NA	NA	NA	0.051	NA	3.4851
1303	20	2818801	2818801	T	C	intronic	PCED1A	NA	NA	NA	intronic	ENSG00000132635	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs751899	0.73	0.73	0.722	0.771166	0.5149	0.87	0.732	0.882	0.8108	0.53	0.9	0.73	0.87	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.275307	NA	NA	NA	NA	NA	0.717	NA	3.4851
1303	9	34618641	34618641	C	T	intronic	DCTN3	NA	NA	NA	intronic	ENSG00000137100	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs3802427	0.23	0.23	0.22	0.222045	0.1541	0.3115	0.2594	0.1952	0.2096	0.16	0.35	0.24	0.19	0.1929	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.648379	NA	NA	0.167907	0.195415	NA	0.152	NA	3.485093
1304	5	148618749	148618749	C	T	intronic	ABLIM3	NA	NA	NA	ncRNA_intronic	ENSG00000248647,ENSG00000253406	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs59032271	0.41	0.41	0.392	0.41893	0.3877	0.5942	0.3746	0.3283	0.4243	0.38	0.55	0.35	0.35	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.039522	NA	NA	0.460717	0.330202	NA	0.428	NA	3.4849163
1304	5	148618752	148618752	G	A	intronic	ABLIM3	NA	NA	NA	ncRNA_intronic	ENSG00000248647,ENSG00000253406	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs59757169	0.41	0.41	0.404	0.41893	0.3877	0.5942	0.3746	0.3283	0.4243	0.38	0.55	0.35	0.35	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.943225	NA	NA	0.460717	0.330925	NA	0.428	NA	3.4849163
1304	17	39471972	39471972	T	G	upstream	KRTAP17-1	NA	NA	NA	upstream	ENSG00000186860	NA	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs12452669	0.2	0.2	0.188	0.188299	0.1819	0.3175	0.1354	0.1354	0.1708	0.18	0.31	0.14	0.14	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.101014	NA	NA	NA	NA	NA	0.152	NA	3.4847666
1304	1	157718325	157718325	T	G	intronic	FCRL2	NA	NA	NA	intronic	ENSG00000132704	NA	NA	NA	NA	NA	1q23.1	NA	NA	NA	NA	rs3818813	0.21	0.21	0.201	0.197284	0.1968	0.25	0.1974	0.2496	0.0726	0.18	0.23	0.2	0.22	0.159	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.695808	NA	NA	0.159535	0.229914	NA	0.225	NA	3.484665
1304	3	49373045	49373045	A	G	intronic	USP4	NA	NA	NA	intronic	ENSG00000114316	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs34514189	0.13	0.13	0.115	0.0910543	0.1988	0.0496	0.098	0.0651	0.0532	0.2	0.07	0.14	0.08	0.1434	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.60411	2.60411	NA	0.17314	0.09714	NA	0.196	NA	3.48466
1304	1	157718430	157718430	T	G	intronic	FCRL2	NA	NA	NA	intronic	ENSG00000132704	NA	NA	NA	NA	NA	1q23.1	NA	NA	NA	NA	rs2275232	0.21	0.21	0.2	0.197284	0.1968	0.25	0.1974	0.2496	0.0726	0.18	0.23	0.2	0.22	0.1591	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.247209	2.247209	NA	0.159535	0.230595	NA	0.232	NA	3.484565
1304	15	101888081	101888081	C	T	intronic	PCSK6	NA	NA	NA	intronic	ENSG00000140479	NA	NA	NA	NA	NA	15q26.3	NA	NA	NA	NA	rs875293	0.51	0.51	0.488	0.481829	0.5159	0.629	0.6542	0.2776	0.4489	0.51	0.66	0.6	0.3	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.87145	NA	NA	NA	NA	NA	0.457	NA	3.4841
1304	18	50731823	50731823	T	C	intronic	DCC	NA	NA	NA	intronic	ENSG00000187323	NA	NA	NA	NA	NA	18q21.2	NA	NA	NA	NA	rs2298606	0.39	0.39	0.355	0.340056	0.5159	0.1548	0.3703	0.3994	0.2485	0.53	0.13	0.41	0.44	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.841704	NA	NA	NA	NA	NA	0.406	NA	3.4841
1304	22	45741543	45741543	G	C	intronic	SMC1B	NA	NA	NA	intronic	ENSG00000077935	NA	NA	NA	NA	NA	22q13.31	NA	NA	NA	NA	rs5765260	0.36	0.36	0.341	0.301118	0.5159	0.3165	0.4827	0.0454	0.2812	0.52	0.37	0.44	0.06	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.819082	NA	NA	NA	NA	NA	0.203	NA	3.4841
1304	16	84497186	84497186	C	T	intronic	ATP2C2	NA	NA	NA	ncRNA_intronic	ENSG00000261286	NA	NA	NA	NA	NA	16q24.1	NA	NA	NA	NA	rs2241634	0.23	0.23	0.215	0.215655	0.3211	0.1935	0.2089	0.2126	0.1391	0.31	0.15	0.24	0.2	0.2425	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.774618	NA	NA	0.286094	0.218572	ID=COSN165279;OCCURENCE=1(breast)	0.297	NA	3.4836393
1304	1	150974162	150974162	G	A	intronic	FAM63A	NA	NA	NA	intronic	ENSG00000143409	NA	NA	NA	NA	NA	1q21.3	NA	Name=PU.1,c-Jun,USF2	Name=27	NA	rs771204	0.82	0.82	0.811	0.822484	0.83	0.8413	0.8833	0.7254	0.8834	0.83	0.83	0.88	0.75	0.8361	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.53719	NA	NA	0.850349	0.755334	NA	0.848	NA	3.483551
1304	1	157718780	157718780	A	G	intronic	FCRL2	NA	NA	NA	intronic	ENSG00000132704	NA	NA	NA	NA	NA	1q23.1	NA	NA	NA	NA	rs3818814	0.21	0.21	0.195	0.197284	0.1968	0.25	0.1974	0.2496	0.0726	0.18	0.23	0.2	0.22	0.1604	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.140774	2.140774	NA	0.159419	0.229687	NA	0.232	NA	3.483381
1304	8	62531670	62531670	T	C	intronic	ASPH	NA	NA	NA	intronic	ENSG00000198363	NA	NA	NA	NA	NA	8q12.3	NA	NA	NA	NA	rs35550451	0.5	0.5	0.507	0.448083	0.5169	0.5149	0.4957	0.4168	0.317	0.53	0.51	0.51	0.43	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.419249	NA	NA	NA	NA	ID=COSN168336;OCCURENCE=1(large_intestine)	0.457	NA	3.4831
1304	11	3799985	3799985	G	A	intronic	NUP98	NA	NA	NA	intronic	ENSG00000110713	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs188044	0.53	0.53	0.556	0.533746	0.5169	0.4187	0.3213	0.7723	0.498	0.51	0.4	0.4	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.026745	NA	NA	NA	NA	NA	0.674	NA	3.4831
1304	16	57946973	57946973	A	G	intronic	CNGB1	NA	NA	NA	intronic	ENSG00000070729	NA	NA	NA	NA	NA	16q21	NA	NA	NA	NA	rs434961	0.63	0.63	0.656	0.644369	0.5169	0.6419	0.536	0.8578	0.5665	0.53	0.62	0.52	0.85	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.68715	NA	NA	NA	NA	NA	0.514	NA	3.4831
1304	20	30452709	30452709	A	G	intronic	DUSP15	NA	NA	NA	intronic	ENSG00000149599	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs41310803	0.12	0.12	0.116	0.0938498	0.2097	NA	0.1095	0.1248	0.0184	0.2	NA	0.1	0.14	0.1349	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.998418	NA	NA	0.172442	0.138901	NA	0.116	NA	3.482958
1304	6	24433483	24433483	T	C	intronic	GPLD1	NA	NA	NA	intronic	ENSG00000112293	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs9461006	0.19	0.19	0.178	0.166733	0.1968	0.1468	0.1124	0.208	0.1391	0.2	0.16	0.12	0.24	0.1644	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.249397	NA	NA	0.15593	0.201997	ID=COSN167705;OCCURENCE=1(urinary_tract),1(large_intestine)	0.145	NA	3.48287
1304	3	86010600	86010600	G	A	intronic	CADM2	NA	NA	NA	intronic	ENSG00000175161	NA	NA	NA	NA	NA	3p12.1	NA	NA	NA	NA	rs9819556	0.14	0.14	0.134	0.170327	0.17	0.1399	0.1571	0.1399	0.2526	0.15	0.14	0.15	0.13	0.181	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.084231	NA	NA	0.166279	0.143441	NA	0.188	NA	3.482721
1304	9	18753529	18753529	A	G	intronic	ADAMTSL1	NA	NA	NA	intronic	ENSG00000178031	NA	NA	NA	NA	NA	9p22.1	NA	NA	NA	NA	rs56778727	0.21	0.21	0.211	0.217452	0.1461	0.2827	0.2248	0.2231	0.2106	0.15	0.29	0.22	0.21	0.2207	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.11331	NA	NA	0.150868	0.206861	NA	0.275	NA	3.482332
1304	11	66052832	66052832	C	G	intronic	YIF1A	NA	NA	NA	intronic	ENSG00000174851	NA	NA	NA	NA	NA	11q13.2	NA	NA	NA	NA	rs2282568	0.2	0.2	0.165	0.196685	0.174	0.2907	0.134	0.1846	0.184	0.18	0.28	0.14	0.16	0.1778	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.081273	NA	NA	0.166007	0.160682	NA	0.217	NA	3.482193
1304	19	9009161	9009161	A	T	intronic	MUC16	NA	NA	NA	intronic	ENSG00000181143	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs12976386	0.59	0.59	0.592	0.601637	0.5179	0.5575	0.634	0.6959	0.5828	0.53	0.54	0.6	0.72	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.258998	NA	NA	NA	NA	NA	0.58	NA	3.4821
1304	20	31647935	31647935	G	T	intronic	BPIFB3	NA	NA	NA	intronic	ENSG00000186190	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs2424936	0.62	0.62	0.605	0.618211	0.5179	0.8036	0.5634	0.6127	0.5767	0.53	0.8	0.55	0.62	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.837146	NA	NA	NA	NA	NA	0.601	NA	3.4821
1304	10	85971347	85971347	G	A	intronic	CDHR1	NA	NA	NA	intronic	ENSG00000148600	NA	NA	NA	NA	NA	10q23.1	NA	NA	NA	NA	rs4933978	0.25	0.25	0.243	0.264577	0.2515	0.0655	0.2378	0.444	0.2597	0.27	0.07	0.23	0.42	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.495081	2.495081	NA	0.266499	0.403902	NA	0.29	NA	3.482001
1304	1	8404093	8404093	C	T	UTR3	SLC45A1	NM_001080397:c.*20C>T	NA	NA	UTR3	ENSG00000162426	ENST00000471889:c.*20C>T,ENST00000377479:c.*20C>T,ENST00000289877:c.*20C>T	NA	NA	NA	NA	1p36.23	NA	NA	NA	NA	rs1055236	0.2	0.2	0.192	0.187101	0.3062	0.126	0.1902	0.1051	0.2362	0.32	0.11	0.19	0.13	0.2577	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.923926	NA	NA	0.287858	0.125511	NA	0.261	NA	3.4815754
1304	16	15843965	15843965	G	A	intronic	MYH11	NA	NA	NA	intronic	ENSG00000133392	NA	NA	NA	NA	NA	16p13.11	NA	NA	NA	NA	rs79295535	0.09	0.09	0.086	0.0686901	0.1839	NA	0.1052	0.0098	0.0746	0.19	NA	0.13	0.02	0.1436	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.658744	NA	NA	0.191047	0.034593	NA	0.043	NA	3.481453
1304	1	21926187	21926187	C	T	intronic	RAP1GAP	NA	NA	NA	intronic	ENSG00000076864	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs1767445	0.55	0.55	0.546	0.540735	0.5189	0.7044	0.5648	0.4062	0.5593	0.53	0.72	0.55	0.4	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.912885	NA	NA	NA	NA	NA	0.42	NA	3.4811
1304	7	97361784	97361784	C	T	intronic	TAC1	NA	NA	NA	intronic	ENSG00000006128	NA	NA	NA	NA	NA	7q21.3	NA	NA	NA	NA	rs2072100	0.5	0.5	0.5	0.509585	0.5189	0.3542	0.4179	0.6936	0.4765	0.53	0.36	0.4	0.69	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.618427	NA	NA	NA	NA	NA	0.384	NA	3.4811
1304	8	123846553	123846553	G	C	intronic	ZHX2	NA	NA	NA	intronic	ENSG00000178764	NA	NA	NA	NA	NA	8q24.13	NA	NA	NA	NA	rs4870818	0.47	0.47	0.415	0.434505	0.5189	0.5556	0.634	0.1293	0.4939	0.53	0.59	0.56	0.15	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.563013	NA	NA	NA	NA	NA	0.435	NA	3.4811
1304	14	55907025	55907025	T	A	intronic	TBPL2	NA	NA	NA	intronic	ENSG00000182521	NA	NA	NA	NA	NA	14q22.3	NA	NA	NA	NA	rs8020152	0.57	0.57	0.544	0.569688	0.5189	0.631	0.6398	0.528	0.5654	0.52	0.64	0.65	0.52	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.114561	NA	NA	NA	NA	NA	0.536	NA	3.4811
1304	15	41827655	41827655	C	T	intronic	RPAP1	NA	NA	NA	intronic	ENSG00000103932	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs2297381	0.41	0.41	0.387	0.388379	0.5189	0.4444	0.3862	0.1445	0.5276	0.52	0.48	0.39	0.15	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.425559	NA	NA	NA	NA	NA	0.464	NA	3.4811
1304	20	3017674	3017674	T	G	intronic	PTPRA	NA	NA	NA	intronic	ENSG00000132670	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs561843	0.71	0.71	0.675	0.703674	0.5189	0.8958	0.7248	0.6929	0.6953	0.53	0.92	0.72	0.72	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.601511	NA	NA	NA	NA	NA	0.652	NA	3.4811
1304	9	15199813	15199813	C	T	intronic	TTC39B	NA	NA	NA	intronic	ENSG00000155158	NA	NA	NA	NA	NA	9p22.3	NA	NA	NA	NA	rs41265314	0.13	0.13	0.129	0.135383	0.1759	0.0278	0.1239	0.2368	0.0757	0.17	0.02	0.11	0.22	0.154	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.018413	NA	NA	0.189306	0.207556	NA	0.174	NA	3.480794
1304	3	191098731	191098731	G	A	intronic	CCDC50	NA	NA	NA	intronic	ENSG00000152492	NA	NA	NA	NA	NA	3q28	NA	NA	NA	NA	rs211043	0.63	0.63	0.644	0.644569	0.495	0.6865	0.5764	0.854	0.5204	0.5	0.65	0.57	0.84	0.5636	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.371391	1.371391	NA	0.460796	0.789868	NA	0.522	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000041440.1;CLNDSDB=.;CLNDSDBID=.	3.480604
1304	9	4561596	4561596	G	A	intronic	SLC1A1	NA	NA	NA	intronic	ENSG00000106686,ENSG00000106688	NA	NA	NA	NA	NA	9p24.2	NA	NA	NA	NA	rs10974625	0.31	0.31	0.273	0.271166	0.2803	0.4663	0.2997	0.1604	0.1902	0.28	0.47	0.33	0.16	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.148588	2.148588	NA	0.239158	0.174133	NA	0.225	NA	3.480542
1304	19	7675877	7675877	T	C	intronic	CAMSAP3	NA	NA	NA	intronic	ENSG00000076826	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs1674034	0.23	0.23	0.176	0.209265	0.2753	0.122	0.3415	0.2027	0.1462	0.27	0.13	0.31	0.2	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.628059	NA	NA	0.244186	0.200145	NA	0.167	NA	3.480514
1304	17	6593922	6593922	T	C	intronic	SLC13A5	NA	NA	NA	intronic	ENSG00000141485	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs218696	0.7	0.7	0.705	0.710663	0.5199	0.8165	0.6729	0.9024	0.5654	0.51	0.83	0.66	0.87	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.21858	NA	NA	NA	NA	NA	0.63	NA	3.4801
1304	19	57687355	57687355	G	A	intergenic	DUXA,ZNF264	dist=8499;dist=15513	NA	NA	ncRNA_exonic	ENSG00000268379	NA	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs736994	0.51	0.51	0.505	0.539137	0.5199	0.2788	0.5029	0.826	0.4652	0.51	0.26	0.5	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.452046	NA	NA	NA	NA	NA	0.739	NA	3.4801
1304	1	27682126	27682126	T	C	intronic	MAP3K6	NA	NA	NA	intronic	ENSG00000142733	NA	NA	NA	NA	NA	1p36.11	NA	NA	NA	NA	rs12742921	0.11	0.11	0.088	0.0864617	0.1918	0.0427	0.1167	0.0076	0.1084	0.2	0.05	0.13	0.01	0.1416	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.08116	NA	NA	0.186628	0.04335	ID=COSN163016;OCCURENCE=1(breast)	0.051	NA	3.479972
1304	22	23967147	23967147	C	T	intronic	C22orf43	NA	NA	NA	intronic	ENSG00000189269	NA	NA	NA	NA	NA	22q11.23	NA	NA	NA	NA	rs2877164	0.34	0.34	0.353	0.361222	0.2555	0.3323	0.2651	0.6082	0.2342	0.25	0.32	0.25	0.59	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.029976	NA	NA	0.264613	0.568642	NA	0.464	NA	3.479887
1304	1	153004778	153004778	C	T	intronic	SPRR1B	NA	NA	NA	intronic	ENSG00000169469	NA	NA	NA	NA	NA	1q21.3	NA	Name=PAX5-N19	NA	NA	rs3820141	0.52	0.52	0.477	0.49401	0.5099	0.5913	0.4251	0.4402	0.499	0.51	0.62	0.46	0.46	0.5045	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.416454	NA	NA	0.50593	0.462097	NA	0.457	NA	3.47967
1304	6	155635585	155635585	A	C	UTR5	TFB1M	NM_016020:c.-23T>G	NA	NA	UTR5	ENSG00000029639	ENST00000367166:c.-23T>G	NA	NA	NA	NA	6q25.3	NA	Name=TBP,CHD2_(N-1250),c-Myc,HEY1,NFKB,PAX5-C20,Oct-2,Pol2,PU.1,RFX5_(N-494),SP1,YY1,YY1_(C-20),Sin3Ak-20,TAF7_(SQ-8),ZNF263,c-Fos,Pol2-4H8,TAF1,Pol2(b),NF-YA,POU2F2,GABP	NA	NA	rs162981	0.71	0.71	0.675	0.731629	0.6044	0.8264	0.7493	0.7141	0.7761	0.6	0.84	0.71	0.71	0.6544	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.203582	NA	NA	0.595	0.689514	NA	0.681	NA	3.4795334
1304	6	29230577	29230577	C	A	intergenic	OR2J2,OR14J1	dist=88226;dist=43890	NA	NA	ncRNA_exonic	ENSG00000204697	NA	NA	NA	NA	NA	6p22.1	NA	Name=CEBPB	NA	NA	rs3117328	0.4	0.4	0.362	0.360623	0.5328	0.3452	0.438	0.1747	0.3957	0.56	0.33	0.46	0.17	0.4777	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.186435	NA	NA	0.51011	0.255591	NA	0.29	NA	3.47939
1304	16	16232433	16232433	G	A	intronic	ABCC1	NA	NA	NA	intronic	ENSG00000103222	NA	NA	NA	NA	NA	16p13.11	NA	NA	NA	NA	rs212088	0.17	0.17	0.163	0.141773	0.164	0.2192	0.1441	0.1112	0.0787	0.16	0.23	0.16	0.11	0.1893	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.370477	NA	NA	0.167334	0.126081	NA	0.174	NA	3.479366
1304	16	8995927	8995927	G	A	intronic	USP7	NA	NA	NA	intronic	ENSG00000187555	NA	NA	NA	NA	NA	16p13.2	Score=783;Name=V$MYCMAX_03	NA	NA	NA	rs2304466	0.45	0.45	0.422	0.423922	0.5099	0.6339	0.4942	0.1422	0.4499	0.51	0.64	0.43	0.13	0.5004	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.56891	3.56891	NA	0.510465	0.215749	NA	0.377	NA	3.479235
1304	2	101541798	101541798	C	T	intronic	NPAS2	NA	NA	NA	intronic	ENSG00000170485	NA	NA	NA	NA	NA	2q11.2	NA	Name=Max,GATA-2,Pol2(b)	Name=96	NA	rs356651	0.9	0.9	0.911	0.912939	0.828	1	0.9121	0.916	0.907	0.83	1	0.9	0.91	0.8695	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.367183	1.367183	NA	0.823372	0.904448	NA	0.906	NA	3.479128
1304	1	144882912	144882912	G	T	intronic	NBPF9,PDE4DIP	NA	NA	NA	intronic	ENSG00000178104	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs1698646	0.29	0.29	NA	NA	NA	NA	NA	NA	NA	0.35	0.07	0.28	0.45	0.3115	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.217124	NA	NA	0.209381	0.319337	NA	0.254	NA	3.479119
1304	3	78676405	78676405	T	C	intronic	ROBO1	NA	NA	NA	intronic	ENSG00000169855	NA	NA	NA	NA	NA	3p12.3	NA	NA	NA	NA	rs7625555	0.59	0.59	0.601	0.596246	0.5209	0.6984	0.5043	0.6641	0.5419	0.52	0.7	0.49	0.65	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.125913	NA	NA	NA	NA	NA	0.594	NA	3.4791
1304	5	156957741	156957741	C	T	intronic	ADAM19	NA	NA	NA	intronic	ENSG00000135074	NA	NA	NA	NA	NA	5q33.3	NA	NA	NA	NA	rs3822696	0.49	0.49	0.487	0.521166	0.5209	0.1964	0.5101	0.7322	0.5787	0.53	0.22	0.51	0.72	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.373362	NA	NA	NA	NA	NA	0.507	NA	3.4791
1304	8	38826290	38826290	G	A	intronic	PLEKHA2	NA	NA	NA	intronic	ENSG00000169499	NA	NA	NA	NA	NA	8p11.22	NA	NA	NA	NA	rs6996274	0.66	0.66	0.673	0.692692	0.5209	0.7907	0.6124	0.8003	0.68	0.52	0.77	0.57	0.8	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.386142	NA	NA	NA	NA	NA	0.703	NA	3.4791
1304	11	5663575	5663575	T	C	intronic	TRIM34,TRIM6-TRIM34	NA	NA	NA	intronic	ENSG00000196565,ENSG00000258588,ENSG00000258659	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs12792498	0.36	0.36	0.355	0.333666	0.5209	0.1022	0.3732	0.3843	0.2832	0.52	0.12	0.42	0.35	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.63096	NA	NA	NA	NA	NA	0.254	NA	3.4791
1304	11	72406297	72406297	C	A	intronic	ARAP1	NA	NA	NA	intronic	ENSG00000186635	NA	NA	NA	NA	NA	11q13.4	NA	NA	NA	NA	rs35250343	0.47	0.47	0.456	0.463259	0.5209	0.376	0.4755	0.4584	0.4918	0.51	0.36	0.52	0.48	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.386091	NA	NA	NA	NA	NA	0.514	NA	3.4791
1304	22	16953560	16953560	T	C	intergenic	OR11H1,CCT8L2	dist=503756;dist=118088	NA	NA	ncRNA_intronic	ENSG00000227367	NA	NA	NA	NA	NA	22q11.1	NA	NA	NA	NA	rs3954571	0.5	0.5	0.458	0.545927	0.5209	0.4474	0.4798	0.6271	0.6104	0.52	0.41	0.48	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.871583	NA	NA	NA	NA	NA	0.007	NA	3.4791
1304	12	115118997	115118997	G	A	intronic	TBX3	NA	NA	NA	intronic	ENSG00000135111	NA	NA	NA	NA	NA	12q24.21	NA	Name=TBP	NA	NA	rs515746	0.47	0.47	0.488	0.444888	0.5189	0.371	0.4135	0.4342	0.4816	0.54	0.4	0.45	0.45	0.4908	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.708288	NA	NA	0.511636	0.441781	ID=COSN164378;OCCURENCE=1(breast)	0.442	NA	3.478664
1304	2	201881677	201881677	A	G	intronic	FAM126B	NA	NA	NA	intronic	ENSG00000155744	NA	NA	NA	NA	NA	2q33.1	NA	NA	NA	NA	rs13405753	0.19	0.19	0.207	0.193091	0.1928	0.0139	0.1484	0.4516	0.0603	0.2	0.0035	0.15	0.41	0.1605	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.017245	NA	NA	0.168256	0.371935	NA	0.203	NA	3.478444
1304	10	105817891	105817891	G	A	intronic	COL17A1	NA	NA	NA	intronic	ENSG00000065618	NA	NA	NA	NA	NA	10q25.1	NA	NA	NA	NA	rs11191910	0.12	0.12	0.116	0.131789	0.1789	0.12	0.1427	0.0431	0.2076	0.19	0.1	0.13	0.05	0.1625	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.073888	NA	NA	0.180233	0.056287	NA	0.065	NA	3.478367
1304	19	10104272	10104272	G	C	intronic	COL5A3	NA	NA	NA	intronic	ENSG00000080573	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs2277963	0.12	0.12	0.108	0.102037	0.17	0.123	0.1196	0.028	0.0982	0.17	0.15	0.13	0.03	0.1556	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.862562	NA	NA	0.196163	0.052655	NA	0.08	NA	3.478237
1304	15	58932932	58932932	T	C	intronic	ADAM10	NA	NA	NA	intronic	ENSG00000137845	NA	NA	NA	NA	NA	15q21.3	NA	NA	NA	NA	rs7165402	0.27	0.27	0.263	0.303714	0.16	0.3839	0.2133	0.3525	0.3671	0.17	0.41	0.17	0.34	0.2293	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.88939	1.88939	NA	0.132572	0.327783	ID=COSN164956;OCCURENCE=1(NS)	0.239	NA	3.478128
1304	16	11850003	11850003	A	G	intronic	ZC3H7A	NA	NA	NA	intronic	ENSG00000122299	NA	NA	NA	NA	NA	16p13.13	NA	NA	NA	NA	rs7198247	0.72	0.72	0.674	0.757588	0.5219	0.8591	0.6441	0.9191	0.7577	0.52	0.85	0.67	0.92	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.686479	NA	NA	NA	NA	NA	0.717	NA	3.4781
1304	19	45997261	45997261	T	A	intronic	RTN2	NA	NA	NA	intronic	ENSG00000125744,ENSG00000213889	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs10421736	0.52	0.52	0.456	0.509784	0.5219	0.5635	0.4741	0.497	0.4847	0.53	0.52	0.49	0.53	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.124842	NA	NA	NA	NA	NA	0.384	NA	3.4781
1304	1	948921	948921	T	C	UTR5	ISG15	NM_005101:c.-33T>C	NA	NA	UTR5	ENSG00000187608	ENST00000379389:c.-33T>C	NA	NA	NA	NA	1p36.33	NA	Name=Sin3Ak-20,TBP,IRF1,GTF2F1_(RAP-74),Pol2-4H8,Pol2,RFX5_(N-494),SP1,Pol2(phosphoS2),EBF1_(C-8),MEF2C_(SC-13268),POU2F2,HMGN3,Oct-2,Pol2(b),TAF1,STAT1,CCNT2,c-Myc,E2F6_(H-50),AP-2gamma,ELF1_(SC-631),STAT2,HEY1,AP-2alpha	Name=142	NA	rs15842	0.9	0.9	NA	0.903155	0.9573	0.999	0.9308	0.7201	0.9765	0.96	1	0.93	0.67	0.9416	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.17582	NA	NA	0.956385	0.747956	NA	0.862	NA	3.4780484
1304	2	74901602	74901602	C	T	intronic	SEMA4F	NA	NA	NA	intronic	ENSG00000135622	NA	NA	NA	NA	NA	2p13.1	NA	NA	NA	NA	rs363608	0.41	0.41	0.417	0.408347	0.1431	0.8115	0.2723	0.4266	0.3374	0.14	0.81	0.23	0.47	0.2449	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.006075	NA	NA	0.134016	0.409669	NA	0.283	NA	3.477984
1304	5	78251347	78251347	A	G	intronic	ARSB	NA	NA	NA	intronic	ENSG00000113273	NA	NA	NA	NA	NA	5q14.1	NA	NA	NA	NA	rs6870443	0.1	0.1	0.106	0.11901	0.168	0.0823	0.1282	0.0454	0.1994	0.18	0.05	0.13	0.04	0.1683	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.895807	NA	NA	0.185814	0.076487	NA	0.087	NA	3.477886
1304	1	228494357	228494357	C	T	intronic	OBSCN	NA	NA	NA	intronic	ENSG00000154358	NA	NA	NA	NA	NA	1q42.13	NA	NA	NA	NA	rs3795795	0.17	0.17	0.14	0.166733	0.159	0.1518	0.2406	0.1974	0.0961	0.16	0.15	0.24	0.17	0.1916	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.353871	NA	NA	0.171574	0.214286	NA	0.167	NA	3.477826
1304	2	90249092	90249092	A	T	intergenic	MIR4436A,LOC654342	dist=1137124;dist=1575617	NA	NA	intronic	ENSG00000242580	NA	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs112898704	0.03	0.03	0.03	0.0363419	0.0686	0.0069	0.0476	0.0015	0.0726	0.08	0.01	0.02	0.002	0.0544	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.491955	NA	NA	0.065844	0.015081	NA	0.014	NA	3.4778227
1304	4	113554385	113554385	A	T	UTR5	C4orf21	NM_018392:c.-53T>A	NA	NA	UTR5	ENSG00000138658	ENST00000505019:c.-53T>A,ENST00000473015:c.-53T>A,ENST00000309071:c.-53T>A,ENST00000445203:c.-4600T>A,ENST00000514770:c.-53T>A,ENST00000503172:c.-53T>A,ENST00000502805:c.-53T>A	NA	NA	NA	NA	4q25	NA	NA	NA	NA	rs13104310	0.41	0.41	0.4	0.416733	0.4284	0.4097	0.5086	0.298	0.5072	0.43	0.42	0.5	0.31	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.898795	1.898795	NA	0.427267	0.322254	ID=COSN167296;OCCURENCE=1(large_intestine)	0.522	NA	3.4776664
1304	11	60107290	60107290	A	G	intronic	MS4A6E	NA	NA	NA	intronic	ENSG00000166926	NA	NA	NA	NA	NA	11q12.2	NA	NA	NA	NA	rs17533331	0.11	0.11	0.095	0.0924521	0.1938	0.0129	0.121	0.0923	0.0501	0.18	0.01	0.13	0.08	0.1404	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.845525	NA	NA	0.18814	0.108942	NA	0.196	NA	3.47766
1304	7	100383605	100383605	T	A	intronic	ZAN	NA	NA	NA	intronic	ENSG00000146839	NA	NA	NA	NA	NA	7q22.1	NA	NA	Name=4	NA	rs160602	0.27	0.27	0.265	0.236222	0.5388	0.0327	0.2752	0.1029	0.2873	0.54	0.03	0.3	0.12	0.4649	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.193181	NA	NA	0.518817	0.172432	NA	0.297	NA	3.477483
1304	19	15904853	15904853	G	A	upstream	OR10H5	NA	NA	NA	UTR5	ENSG00000172519	ENST00000308940:c.-6G>A	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs11085991	0.14	0.14	0.129	0.147165	0.161	0.122	0.111	0.1233	0.2168	0.17	0.14	0.1	0.13	0.1816	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.435056	NA	NA	0.180116	0.13005	NA	0.174	NA	3.477284
1304	17	7557834	7557834	C	T	intronic	ATP1B2	NA	NA	NA	intronic	ENSG00000129244	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs1642764	0.46	0.46	0.458	0.419129	0.5229	0.5853	0.4669	0.2352	0.3558	0.52	0.55	0.48	0.25	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.875095	NA	NA	NA	NA	NA	0.435	NA	3.4771
1304	17	16248083	16248083	T	A	intronic	CENPV	NA	NA	NA	intronic	ENSG00000108474,ENSG00000166582	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs9907546	0.37	0.37	0.301	0.327476	0.5229	0.1339	0.5159	0.2345	0.318	0.52	0.14	0.56	0.26	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.024208	NA	NA	NA	NA	NA	0.167	NA	3.4771
1304	18	3112252	3112252	C	A	intronic	MYOM1	NA	NA	NA	intronic	ENSG00000101605	NA	NA	NA	NA	NA	18p11.31	NA	NA	NA	NA	rs55779127	0.1	0.1	0.091	0.0810703	0.2018	NA	0.1052	0.0204	0.1053	0.21	NA	0.12	0.03	0.1406	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.296335	NA	NA	0.180525	0.042648	NA	0.065	NA	3.477075
1304	22	50499964	50499964	T	C	UTR3	MLC1	NM_139202:c.*48A>G,NM_015166:c.*48A>G	NA	NA	UTR3	ENSG00000100427	ENST00000311597:c.*48A>G,ENST00000395876:c.*48A>G,ENST00000538737:c.*48A>G,ENST00000431262:c.*48A>G,ENST00000535444:c.*48A>G,ENST00000450140:c.*48A>G	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs137919	0.26	0.26	0.222	0.282947	0.2694	0.3373	0.3775	0.0719	0.4591	0.26	0.33	0.37	0.1	0.2974	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.217281	NA	NA	0.289486	0.111666	NA	0.217	NA	3.4770474
1304	1	145696694	145696694	G	A	intronic	CD160,NBPF10	NA	NA	NA	UTR3	ENSG00000117281	ENST00000369290:c.*2092C>T	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs2231375	0.23	0.23	0.197	0.205072	0.3489	0.1558	0.33	0.0635	0.2106	0.35	0.13	0.35	0.07	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.293597	NA	NA	0.340981	0.121387	NA	0.203	NA	3.4767857
1304	6	41217415	41217415	C	T	downstream	TREML5P	NA	NA	NA	downstream	ENSG00000225690	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs28588452	0.21	0.21	0.187	0.205072	0.1899	0.4028	0.1902	0.0371	0.2546	0.2	0.42	0.15	0.04	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.201985	NA	NA	NA	NA	NA	0.152	NA	3.4767666
1304	12	131603031	131603031	G	A	intronic	GPR133	NA	NA	NA	intronic	ENSG00000111452	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs7295131	0.14	0.14	0.138	0.102236	0.1928	0.006	0.1225	0.1415	0.0409	0.2	0.01	0.17	0.18	0.1413	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.286913	NA	NA	0.189302	0.159555	NA	0.13	NA	3.476598
1304	5	179554602	179554602	C	T	intronic	RASGEF1C	NA	NA	NA	intronic	ENSG00000146090	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs57288534	0.11	0.11	0.097	0.120208	0.1819	0.0645	0.1153	0.0318	0.2372	0.18	0.06	0.13	0.04	0.1675	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.893414	NA	NA	0.17407	0.051067	NA	0.196	NA	3.47653
1304	2	33614187	33614187	C	T	intronic	LTBP1	NA	NA	NA	intronic	ENSG00000049323	NA	NA	NA	NA	NA	2p22.3	NA	NA	NA	NA	rs642472	0.5	0.5	0.493	0.502596	0.5239	0.6825	0.6686	0.2171	0.5634	0.52	0.64	0.63	0.22	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.755229	NA	NA	NA	NA	NA	0.442	NA	3.4761
1304	3	49744392	49744392	A	G	intronic	RNF123	NA	NA	NA	intronic	ENSG00000164068	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs3749241	0.61	0.61	0.551	0.597244	0.5239	0.8333	0.6484	0.4138	0.6411	0.53	0.83	0.66	0.45	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.468046	NA	NA	NA	NA	NA	0.638	NA	3.4761
1304	7	141762625	141762625	A	G	intronic	MGAM	NA	NA	NA	intronic	ENSG00000257335	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs62477625	0.4	0.4	0.358	0.367412	0.5239	0.494	0.3545	0.0817	0.4714	0.52	0.48	0.44	0.09	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.119745	NA	NA	NA	NA	NA	0.406	NA	3.4761
1304	10	106916819	106916819	G	A	intronic	SORCS3	NA	NA	NA	intronic	ENSG00000156395	NA	NA	NA	NA	NA	10q25.1	NA	NA	NA	NA	rs2297500	0.38	0.38	0.356	0.368211	0.5239	0.1796	0.5836	0.2526	0.4059	0.52	0.16	0.59	0.29	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.471638	NA	NA	NA	NA	NA	0.29	NA	3.4761
1304	22	24179724	24179724	G	C	intronic	DERL3	NA	NA	NA	intronic	ENSG00000099958	NA	NA	NA	NA	NA	22q11.23	NA	NA	NA	NA	rs2070462	0.37	0.37	0.299	0.32528	0.5239	0.3204	0.5461	0.031	0.3671	0.51	0.35	0.52	0.05	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.308438	NA	NA	NA	NA	NA	0.29	NA	3.4761
1304	16	84476224	84476224	G	T	intronic	ATP2C2	NA	NA	NA	intronic	ENSG00000064270	NA	NA	NA	NA	NA	16q24.1	NA	NA	NA	NA	rs2288581	0.28	0.28	0.266	0.282748	0.166	0.5278	0.3487	0.1649	0.2628	0.16	0.53	0.29	0.15	0.2114	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.131464	NA	NA	0.146573	0.178685	NA	0.217	NA	3.476027
1304	20	16712280	16712280	C	T	intronic	SNRPB2	NA	NA	NA	intronic	ENSG00000125870	NA	NA	NA	NA	NA	20p12.1	NA	NA	NA	NA	rs6111262	0.19	0.19	0.178	0.170128	0.2545	0.2123	0.2017	0.0318	0.2045	0.26	0.21	0.2	0.04	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.353808	NA	NA	0.269524	0.066474	NA	0.094	NA	3.475976
1304	1	145367863	145367863	A	T	intronic	NBPF10,NBPF9	NA	NA	NA	intronic	ENSG00000163386	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs78014802	NA	NA	0.753	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5242	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.43202	NA	NA	NA	NA	NA	0.246	NA	3.4758
1304	1	95614215	95614215	G	A	intronic	TMEM56,TMEM56-RWDD3	NA	NA	NA	intronic	ENSG00000152078,ENSG00000271092	NA	NA	NA	NA	NA	1p21.3	NA	NA	NA	NA	rs76921353	0.14	0.14	0.137	0.128395	0.1819	0.0694	0.1556	0.1142	0.1339	0.19	0.08	0.17	0.12	0.1604	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.707069	1.707069	NA	0.181903	0.116485	NA	0.109	NA	3.475797
1304	7	128141083	128141083	A	G	intronic	METTL2B	NA	NA	NA	intronic	ENSG00000165055	NA	NA	NA	NA	NA	7q32.1	NA	NA	NA	NA	rs10271878	0.27	0.27	0.234	0.277955	0.2495	0.251	0.2493	0.3207	0.2975	0.24	0.24	0.28	0.33	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.106088	NA	NA	0.274843	0.315751	NA	0.261	NA	3.475657
1304	17	61996199	61996199	T	A	upstream	GH1	NA	NA	NA	upstream	ENSG00000204414,ENSG00000259384	NA	NA	NA	NA	NA	17q23.3	NA	NA	NA	NA	rs695	0.07	0.07	0.039	0.0786741	0.0905	0.0347	0.0504	0.1528	0.0317	0.08	0.02	0.05	0.12	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.487519	NA	NA	0.100566	0.145954	NA	0.072	NA	3.4756006
1304	9	136213521	136213521	T	C	UTR5	MED22	NM_181491:c.-4A>G,NM_133640:c.-4A>G	NA	NA	UTR5	ENSG00000148297	ENST00000491289:c.-4A>G,ENST00000344469:c.-4A>G,ENST00000343730:c.-4A>G,ENST00000486395:c.-4A>G,ENST00000476080:c.-4A>G,ENST00000371999:c.-4A>G,ENST00000446777:c.-4A>G,ENST00000494177:c.-4A>G,ENST00000457204:c.-4A>G	NA	NA	NA	NA	9q34.2	Score=755;Name=V$TCF11MAFG_01	NA	NA	NA	rs616836	0.69	0.69	0.698	0.686502	0.6064	0.7024	0.6297	0.8767	0.5358	0.58	0.73	0.64	0.85	0.6295	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.183264	NA	NA	0.621977	0.83182	NA	0.674	NA	3.4754564
1304	1	205549122	205549122	T	A	intronic	MFSD4	NA	NA	NA	intronic	ENSG00000174514	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs77822322	0.14	0.14	0.121	0.156949	0.1551	0.0575	0.2363	0.1581	0.2035	0.16	0.05	0.22	0.15	0.1892	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.68888	NA	NA	0.180252	0.14925	NA	0.174	NA	3.475448
1304	1	205739396	205739396	T	G	UTR3	RAB7L1	NM_001135663:c.*74A>C,NM_001135662:c.*74A>C,NM_001135664:c.*74A>C,NM_003929:c.*74A>C	NA	NA	UTR3	ENSG00000117280	ENST00000367139:c.*74A>C,ENST00000235932:c.*74A>C,ENST00000528078:c.*303A>C,ENST00000437324:c.*74A>C,ENST00000446390:c.*74A>C	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs823139	0.75	0.75	0.735	0.721046	0.8579	0.8462	0.7767	0.441	0.7904	0.87	0.85	0.81	0.42	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.919306	NA	NA	NA	NA	NA	0.819	NA	3.4754334
1304	17	80617552	80617552	G	A	intronic	RAB40B	NA	NA	NA	intronic	ENSG00000141542	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs2279395	0.15	0.15	0.134	0.122204	0.171	0.1796	0.0807	0.0946	0.0798	0.18	0.2	0.09	0.08	0.1679	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.010704	NA	NA	0.185698	0.107127	ID=COSN165553;OCCURENCE=1(breast)	0.196	NA	3.475402
1304	20	46313135	46313135	C	T	intronic	SULF2	NA	NA	NA	ncRNA_exonic	ENSG00000255438	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs2297586	0.26	0.26	0.254	0.249201	0.2813	0.2232	0.3285	0.211	0.2382	0.27	0.24	0.33	0.21	0.2792	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.180202	NA	NA	0.297442	0.22911	NA	0.333	NA	3.4753913
1304	9	90432159	90432159	G	A	intergenic	CTSL3P,CTSL1P8	dist=30360;dist=27501	NA	NA	ncRNA_exonic	ENSG00000232743	NA	NA	NA	NA	NA	9q22.1	NA	NA	NA	NA	rs11141977	0.39	0.39	0.378	0.355032	0.5249	0.2609	0.3977	0.3343	0.2751	0.51	0.24	0.43	0.34	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.910012	NA	NA	NA	NA	NA	0.261	NA	3.4751
1304	8	23069574	23069574	T	C	intronic	TNFRSF10A	NA	NA	NA	intronic	ENSG00000104689	NA	NA	NA	NA	NA	8p21.3	NA	NA	NA	NA	rs13274366	0.28	0.28	0.25	0.245607	0.5249	0.0208	0.3458	0.1112	0.3006	0.52	0.02	0.4	0.13	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.62564	NA	NA	NA	NA	NA	0.348	NA	3.4751
1304	15	62210274	62210274	G	T	intronic	VPS13C	NA	NA	NA	intronic	ENSG00000129003	NA	NA	NA	NA	NA	15q22.2	NA	NA	NA	NA	rs11071639	0.52	0.52	0.483	0.506589	0.5249	0.4722	0.6556	0.4758	0.4591	0.52	0.49	0.63	0.46	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.662439	NA	NA	NA	NA	NA	0.413	NA	3.4751
1305	21	38467616	38467616	C	A	intronic	TTC3	NA	NA	NA	intronic	ENSG00000182670	NA	NA	NA	Score=259;Name=lod=15	NA	21q22.13	NA	NA	NA	NA	rs2006941	0.42	0.42	0.421	0.40595	0.5258	0.379	0.3818	0.3608	0.3885	0.53	0.36	0.4	0.36	0.4695	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.010508	3.010508	NA	0.529774	0.372785	NA	0.333	NA	3.474926
1305	6	44269193	44269193	C	T	exonic	AARS2	NA	synonymous SNV	AARS2:NM_020745:exon20:c.G2607A:p.K869K	exonic	ENSG00000124608	NA	synonymous SNV	ENSG00000124608:ENST00000244571:exon20:c.G2607A:p.K869K	NA	NA	6p21.1	NA	NA	NA	NA	rs498512	0.61	0.61	0.564	0.582668	0.7266	0.4256	0.7666	0.4622	0.6288	0.73	0.44	0.79	0.48	0.7015	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.725163	NA	NA	0.76407	0.512937	NA	0.616	NA	3.4744966
1305	12	4716572	4716572	C	A	intronic	DYRK4	NA	NA	NA	intronic	ENSG00000010219,ENSG00000139180	NA	NA	NA	NA	NA	12p13.32	NA	NA	NA	NA	rs997373	0.29	0.29	0.294	0.32528	0.1362	0.4286	0.1787	0.3956	0.4223	0.13	0.46	0.19	0.39	0.2288	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.203475	NA	NA	0.160581	0.389242	NA	0.232	NA	3.474419
1305	1	201197331	201197331	G	A	intronic	IGFN1	NA	NA	NA	intronic	ENSG00000163395	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs3753971	0.67	0.67	0.691	0.709265	0.5258	0.6657	0.598	0.9274	0.727	0.52	0.71	0.56	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.696971	NA	NA	NA	NA	NA	0.739	NA	3.4742
1305	3	9948241	9948241	G	A	intronic	IL17RE	NA	NA	NA	intronic	ENSG00000163701	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs279580	0.38	0.38	0.397	0.380791	0.5258	0.0873	0.4611	0.4818	0.3405	0.52	0.06	0.46	0.48	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.09824	NA	NA	NA	NA	NA	0.297	NA	3.4742
1305	4	38990334	38990334	C	T	intronic	TMEM156	NA	NA	NA	intronic	ENSG00000121895	NA	NA	NA	NA	NA	4p14	NA	NA	NA	NA	rs3821986	0.48	0.48	0.476	0.458267	0.5258	0.626	0.4971	0.2057	0.5297	0.52	0.65	0.47	0.22	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.029398	NA	NA	NA	NA	NA	0.507	NA	3.4742
1305	9	90432078	90432078	G	A	intergenic	CTSL3P,CTSL1P8	dist=30279;dist=27582	NA	NA	ncRNA_exonic	ENSG00000232743	NA	NA	NA	NA	NA	9q22.1	NA	NA	NA	NA	rs10868655	0.35	0.35	0.345	0.30651	0.5258	0.2599	0.379	0.1604	0.2751	0.52	0.24	0.41	0.17	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.435579	NA	NA	NA	NA	NA	0.203	NA	3.4742
1305	9	90432515	90432515	A	G	intergenic	CTSL3P,CTSL1P8	dist=30716;dist=27145	NA	NA	ncRNA_exonic	ENSG00000232743	NA	NA	NA	NA	NA	9q22.1	NA	NA	NA	NA	rs7867409	0.4	0.4	0.392	0.355831	0.5258	0.2619	0.3977	0.3359	0.2751	0.52	0.24	0.43	0.36	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.373439	NA	NA	NA	NA	NA	0.254	NA	3.4742
1305	16	12437556	12437556	G	C	intronic	SNX29	NA	NA	NA	intronic	ENSG00000048471	NA	NA	NA	NA	NA	16p13.13	NA	NA	NA	NA	rs8051010	0.34	0.34	0.308	0.284944	0.5258	0.2768	0.2939	0.1422	0.2321	0.51	0.29	0.31	0.16	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.029297	NA	NA	NA	NA	NA	0.37	NA	3.4742
1305	21	38469069	38469069	G	C	intronic	TTC3	NA	NA	NA	intronic	ENSG00000182670	NA	NA	NA	NA	NA	21q22.13	NA	NA	NA	NA	rs2835602	0.42	0.42	0.443	0.40595	0.5258	0.379	0.3818	0.3608	0.3885	0.53	0.36	0.4	0.36	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.712782	NA	NA	NA	NA	NA	0.333	NA	3.4742
1305	3	53758049	53758049	G	A	intronic	CACNA1D	NA	NA	NA	intronic	ENSG00000157388	NA	NA	NA	NA	NA	3p21.1	NA	NA	NA	NA	rs2070617	0.26	0.26	0.252	0.282548	0.17	0.4782	0.2435	0.1271	0.4346	0.16	0.51	0.22	0.13	0.2125	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.220709	NA	NA	0.143372	0.119383	NA	0.225	NA	3.474128
1305	11	6530106	6530106	A	G	intronic	DNHD1	NA	NA	NA	intronic	ENSG00000179532,ENSG00000265264	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs11605607	0.11	0.11	0.108	0.110623	0.1799	0.0169	0.1556	0.0764	0.1503	0.19	0.02	0.14	0.08	0.1543	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.76347	1.76347	NA	0.192039	0.09632	NA	0.217	NA	3.473761
1305	2	79878664	79878664	A	G	intronic	CTNNA2	NA	NA	NA	intronic	ENSG00000066032	NA	NA	NA	NA	NA	2p12	NA	NA	NA	NA	rs3739139	0.28	0.28	0.3	0.309704	0.1352	0.2976	0.2378	0.4773	0.3262	0.14	0.29	0.23	0.52	0.226	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.236394	NA	NA	0.165449	0.457886	NA	0.268	NA	3.473351
1305	9	90432732	90432732	A	G	intergenic	CTSL3P,CTSL1P8	dist=30933;dist=26928	NA	NA	ncRNA_exonic	ENSG00000232743	NA	NA	NA	NA	NA	9q22.1	NA	NA	NA	NA	rs7870635	0.42	0.42	0.41	0.38119	0.5268	0.2639	0.4092	0.407	0.2975	0.52	0.24	0.45	0.45	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.426844	NA	NA	NA	NA	NA	0.319	NA	3.4732
1305	8	126445505	126445505	G	C	intronic	TRIB1	NA	NA	NA	intronic	ENSG00000173334	NA	NA	NA	NA	NA	8q24.13	NA	NA	NA	NA	rs13277396	0.38	0.38	0.34	0.333466	0.5268	0.1657	0.4409	0.3306	0.2352	0.53	0.18	0.43	0.35	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.270871	3.270871	NA	NA	NA	NA	0.471	NA	3.4732
1305	9	37305481	37305481	C	G	intronic	ZCCHC7	NA	NA	NA	intronic	ENSG00000147905	NA	NA	NA	NA	NA	9p13.2	NA	NA	NA	NA	rs3780334	0.49	0.49	0.482	0.499601	0.5268	0.3274	0.4611	0.6513	0.4714	0.55	0.32	0.49	0.59	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.152752	NA	NA	NA	NA	NA	0.514	NA	3.4732
1305	16	56436824	56436824	A	G	intronic	AMFR	NA	NA	NA	intronic	ENSG00000159461	NA	NA	NA	NA	NA	16q12.2	NA	NA	NA	NA	rs2440472	0.58	0.58	0.621	0.615615	0.5268	0.4454	0.5216	0.8525	0.6288	0.53	0.47	0.52	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.222422	NA	NA	NA	NA	NA	0.71	NA	3.4732
1305	17	16049626	16049626	A	T	intronic	NCOR1	NA	NA	NA	intronic	ENSG00000141027	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs11078333	0.3	0.3	0.243	0.324281	0.5268	0.129	0.4438	0.2579	0.3221	0.46	0.1	0.4	0.23	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.41991	NA	NA	NA	NA	NA	0.094	NA	3.4732
1305	18	50912352	50912352	T	C	intronic	DCC	NA	NA	NA	intronic	ENSG00000187323	NA	NA	NA	NA	NA	18q21.2	NA	NA	NA	NA	rs3764496	0.34	0.34	0.308	0.303115	0.5268	0.2212	0.2925	0.1755	0.3374	0.52	0.22	0.35	0.19	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.356929	NA	NA	NA	NA	NA	0.391	NA	3.4732
1305	8	142437934	142437934	C	T	intronic	PTP4A3	NA	NA	NA	intronic	ENSG00000184489	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs7465654	0.18	0.18	0.188	0.165735	0.1879	0.1508	0.1081	0.1959	0.1585	0.2	0.17	0.11	0.22	0.1808	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.125679	NA	NA	0.15856	0.1642	NA	0.232	NA	3.47274
1305	19	3910933	3910933	G	A	intronic	ATCAY	NA	NA	NA	intronic	ENSG00000167654	NA	NA	NA	NA	NA	19p13.3	NA	Name=SUZ12	NA	NA	rs4807527	0.65	0.65	0.609	0.698882	0.4523	0.9415	0.6744	0.6505	0.7853	0.44	0.94	0.65	0.64	0.5912	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.734623	NA	NA	0.483856	0.606636	NA	0.725	NA	3.472644
1305	14	100592959	100592959	G	A	intronic	EVL	NA	NA	NA	intronic	ENSG00000196405	NA	NA	NA	NA	NA	14q32.2	NA	NA	NA	NA	rs726514	0.38	0.38	0.375	0.377396	0.5278	0.2222	0.5086	0.2186	0.5041	0.54	0.24	0.52	0.21	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.243022	NA	NA	NA	NA	NA	0.362	NA	3.4722
1305	17	16221319	16221319	T	C	intronic	PIGL	NA	NA	NA	intronic	ENSG00000108474	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs9890539	0.46	0.46	0.447	0.448882	0.5278	0.1994	0.5274	0.6301	0.3241	0.53	0.19	0.57	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.82297	NA	NA	NA	NA	NA	0.449	NA	3.4722
1305	3	49322027	49322027	T	A	intronic	USP4	NA	NA	NA	intronic	ENSG00000114316	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs2304442	0.16	0.16	0.178	0.142971	0.1978	0.0476	0.111	0.2564	0.0542	0.2	0.06	0.15	0.24	0.1563	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.937283	1.937283	NA	0.173837	0.240127	ID=COSM149388;OCCURENCE=1(stomach)	0.232	NA	3.472063
1305	3	182681740	182681740	C	T	exonic	DCUN1D1	NA	synonymous SNV	DCUN1D1:NM_020640:exon3:c.G318A:p.A106A	exonic	ENSG00000043093	NA	synonymous SNV	ENSG00000043093:ENST00000292782:exon3:c.G318A:p.A106A,ENSG00000043093:ENST00000469954:exon3:c.G273A:p.A91A,ENSG00000043093:ENST00000497606:exon3:c.G273A:p.A91A,ENSG00000043093:ENST00000460412:exon4:c.G273A:p.A91A,ENSG00000043093:ENST00000487822:exon4:c.G273A:p.A91A	NA	NA	3q26.33	NA	NA	NA	NA	rs4859146	0.59	0.59	0.589	0.613019	0.7425	0.2738	0.7017	0.7322	0.6053	0.72	0.25	0.65	0.74	0.6885	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.47355	1.47355	NA	0.763605	0.743305	NA	0.601	NA	3.4720616
1305	14	92609334	92609334	T	C	intronic	CPSF2	NA	NA	NA	intronic	ENSG00000165934	NA	NA	NA	NA	NA	14q32.12	NA	NA	NA	NA	rs35609412	0.23	0.23	0.227	0.24381	0.164	0.3194	0.1052	0.2973	0.274	0.17	0.31	0.1	0.32	0.1998	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.369693	1.369693	NA	0.164186	0.249433	NA	0.246	NA	3.472014
1305	6	158502137	158502137	G	T	intronic	SYNJ2	NA	NA	NA	intronic	ENSG00000078269	NA	NA	NA	Score=529;Name=lod=188	NA	6q25.3	NA	NA	NA	NA	rs2256014	0.55	0.55	0.576	0.548922	0.5089	0.5784	0.3516	0.6634	0.545	0.53	0.54	0.39	0.7	0.5097	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.33348	NA	NA	0.509419	0.635497	NA	0.572	NA	3.471981
1305	8	29005143	29005143	A	G	intronic	KIF13B	NA	NA	NA	intronic	ENSG00000197892	NA	NA	NA	NA	NA	8p12	NA	NA	NA	NA	rs6986829	0.22	0.22	0.203	0.236022	0.1491	0.2341	0.3718	0.2678	0.1881	0.15	0.24	0.33	0.24	0.2201	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.667799	NA	NA	0.159185	0.230442	ID=COSN168299;OCCURENCE=2(large_intestine),1(endometrium)	0.297	NA	3.471615
1305	16	460504	460504	C	T	intronic	DECR2	NA	NA	NA	intronic	ENSG00000242612	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs3743893	0.41	0.41	0.385	0.396166	0.5288	0.5337	0.3674	0.1415	0.4826	0.53	0.5	0.39	0.13	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.333116	NA	NA	NA	NA	NA	0.174	NA	3.4712
1305	6	2838102	2838102	G	A	intronic	SERPINB1	NA	NA	NA	intronic	ENSG00000021355	NA	NA	NA	NA	NA	6p25.2	NA	Name=Pol2	NA	NA	rs316340	0.45	0.45	0.414	0.41853	0.5209	0.5228	0.5778	0.0915	0.5348	0.53	0.57	0.56	0.12	0.4949	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.501874	NA	NA	0.513256	0.17113	NA	0.275	NA	3.470944
1305	5	108713970	108713970	C	T	exonic	PJA2	NA	synonymous SNV	PJA2:NM_014819:exon4:c.G1218A:p.E406E	exonic	ENSG00000198961	NA	synonymous SNV	ENSG00000198961:ENST00000361557:exon3:c.G1218A:p.E406E,ENSG00000198961:ENST00000361189:exon4:c.G1218A:p.E406E	NA	NA	5q21.3	NA	NA	NA	NA	rs10042721	0.66	0.66	0.684	0.680112	0.7416	0.4355	0.6398	0.8654	0.6472	0.74	0.4	0.67	0.85	0.6984	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.371004	NA	NA	0.756047	0.811535	NA	0.754	NA	3.4706196
1305	2	33413640	33413640	G	T	intronic	LTBP1	NA	NA	NA	intronic	ENSG00000049323	NA	NA	NA	Score=579;Name=lod=301	NA	2p22.3	NA	NA	NA	NA	rs6712473	0.49	0.49	0.463	0.446685	0.503	0.3909	0.4899	0.5159	0.3221	0.5	0.43	0.5	0.55	0.4994	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.562509	NA	NA	0.527093	0.539492	NA	0.428	NA	3.470507
1305	16	1657284	1657284	C	G	UTR5	IFT140	NM_014714:c.-17G>C	NA	NA	ncRNA_UTR5	ENSG00000187535	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs1894649	0.48	0.48	0.491	0.514976	0.3062	0.5942	0.4006	0.7239	0.4468	0.3	0.58	0.39	0.73	0.4004	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.195356	NA	NA	0.323023	0.664166	NA	0.435	NA	3.470377
1305	9	88618462	88618462	C	G	intronic	NAA35	NA	NA	NA	intronic	ENSG00000135040	NA	NA	NA	NA	NA	9q21.33	Score=841;Name=V$CDC5_01	NA	NA	NA	rs1328923	0.27	0.27	0.278	0.219649	0.5557	0.0228	0.2824	0.0772	0.2249	0.56	0.02	0.33	0.08	0.4319	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.942286	NA	NA	0.542056	0.150569	NA	0.246	NA	3.470344
1305	1	110456866	110456866	C	A	intronic	CSF1	NA	NA	NA	intronic	ENSG00000184371	NA	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	rs2297706	0.31	0.31	0.291	0.324281	0.1382	0.5337	0.2262	0.4463	0.2045	0.14	0.53	0.22	0.39	0.2289	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.711948	3.711948	NA	0.162558	0.397413	NA	0.326	NA	3.470342
1305	1	220641247	220641247	G	A	intergenic	RAB3GAP2,MARK1	dist=195404;dist=60321	NA	NA	upstream	ENSG00000226226	NA	NA	NA	NA	NA	1q41	NA	NA	NA	NA	rs78202658	0.02	0.02	0.019	0.0271565	0.0298	0.0169	0.0288	NA	0.0706	0.03	0.01	0.03	NA	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.968316	NA	NA	NA	NA	NA	0.014	NA	3.4702
1305	2	46583235	46583235	C	A	intronic	EPAS1	NA	NA	NA	intronic	ENSG00000116016	NA	NA	NA	NA	NA	2p21	NA	NA	NA	NA	rs6743991	0.72	0.72	0.726	0.737021	0.5298	0.8671	0.7666	0.8381	0.6585	0.53	0.87	0.74	0.84	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.467409	NA	NA	NA	NA	NA	0.659	NA	3.4702
1305	3	97868174	97868174	T	G	upstream	OR5H14	NA	NA	NA	UTR5	ENSG00000236032	ENST00000437310:c.-56T>G	NA	NA	NA	NA	3q11.2	NA	NA	NA	NA	rs4857075	0.58	0.58	0.586	0.587859	0.5298	0.5228	0.5648	0.7118	0.5634	0.54	0.58	0.52	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.207398	NA	NA	NA	NA	NA	0.507	NA	3.4702
1305	8	17920820	17920820	A	T	intronic	ASAH1	NA	NA	NA	intronic	ENSG00000104763	NA	NA	NA	NA	NA	8p22	NA	NA	NA	NA	rs7824650	0.31	0.31	NA	0.273962	0.5298	0.2044	0.2853	0.1293	0.2699	0.53	0.2	0.28	0.12	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.748931	NA	NA	NA	NA	NA	0.341	NA	3.4702
1305	12	124350444	124350444	C	T	intronic	DNAH10	NA	NA	NA	intronic	ENSG00000197653	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs7314963	0.39	0.39	0.378	0.374601	0.5298	0.2312	0.4784	0.2791	0.4182	0.53	0.23	0.5	0.26	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.216489	NA	NA	NA	NA	NA	0.348	NA	3.4702
1305	15	58904237	58904237	C	T	intronic	ADAM10	NA	NA	NA	intronic	ENSG00000137845	NA	NA	NA	NA	NA	15q21.3	NA	NA	NA	NA	rs8039791	0.32	0.32	0.325	0.355831	0.161	0.38	0.2219	0.553	0.3599	0.17	0.41	0.19	0.55	0.238	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.239464	NA	NA	0.130825	0.503422	NA	0.29	NA	3.470175
1305	17	4608052	4608052	A	G	upstream	PELP1	NA	NA	NA	ncRNA_intronic	ENSG00000244184	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs7225717	0.69	0.69	0.666	0.695088	0.6968	0.8284	0.7219	0.4841	0.8221	0.72	0.85	0.72	0.45	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.494539	NA	NA	NA	NA	NA	0.572	NA	3.4698666
1305	17	36499795	36499795	G	C	upstream	GPR179	NA	NA	NA	upstream	ENSG00000188888	NA	NA	NA	NA	NA	17q12	NA	NA	NA	NA	rs61706454	0.23	0.23	0.23	0.233626	0.1968	0.0754	0.1772	0.4667	0.1595	0.18	0.08	0.21	0.49	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.250018	NA	NA	NA	NA	NA	0.304	NA	3.4698666
1305	21	47536546	47536546	C	T	intronic	COL6A2	NA	NA	NA	intronic	ENSG00000142173	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs762438	0.44	0.44	0.427	0.397564	0.5209	0.4117	0.6398	0.2088	0.3395	0.54	0.4	0.62	0.22	0.4922	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.724669	NA	NA	0.517209	0.243869	NA	0.355	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000079902.1;CLNDSDB=.;CLNDSDBID=.	3.469691
1305	4	141548569	141548569	T	C	intronic	TBC1D9	NA	NA	NA	intronic	ENSG00000109436	NA	NA	NA	NA	NA	4q31.21	NA	NA	NA	NA	rs3816933	0.23	0.23	0.25	0.255391	0.1511	0.1419	0.1542	0.5272	0.184	0.15	0.11	0.19	0.53	0.2388	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.034405	NA	NA	0.140476	0.455483	NA	0.297	NA	3.469624
1305	16	15116625	15116625	G	T	intronic	PDXDC1	NA	NA	NA	intronic	ENSG00000179889	NA	NA	NA	NA	NA	16p13.11	NA	NA	NA	NA	rs1058637	0.51	0.51	0.501	NA	NA	NA	NA	NA	NA	0.53	0.52	0.61	0.39	0.5305	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.707791	NA	NA	NA	NA	NA	0.471	NA	3.4695
1305	22	20100409	20100409	C	T	intronic	TRMT2A	NA	NA	NA	intronic	ENSG00000099899	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs9606254	0.08	0.08	0.072	0.0898562	0.1819	0.004	0.1182	0.0045	0.1789	0.17	0.0035	0.13	0.0041	0.1539	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.136406	NA	NA	0.194767	0.03291	NA	0.036	NA	3.469433
1305	14	102507065	102507065	G	C	intronic	DYNC1H1	NA	NA	NA	ncRNA_intronic	ENSG00000258959	NA	NA	NA	NA	NA	14q32.31	NA	NA	NA	NA	rs17541540	0.28	0.28	0.255	0.258387	0.4404	0.2619	0.2896	0.0204	0.3671	0.46	0.25	0.27	0.04	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.925607	NA	NA	0.423633	0.081647	NA	0.312	NA	3.4693003
1305	20	55982579	55982579	T	C	ncRNA_intronic	MIR5095	NA	NA	NA	intronic	ENSG00000132819	NA	NA	NA	NA	NA	20q13.31	NA	NA	NA	NA	rs3764719	0.34	0.34	0.356	0.367412	0.2962	0.0159	0.2176	0.9455	0.1278	0.27	0.02	0.23	0.9	0.2846	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.084167	NA	NA	0.283286	0.806519	NA	0.457	NA	3.4692473
1305	19	41712424	41712424	A	G	UTR3	CYP2S1	NM_030622:c.*31A>G	NA	NA	UTR3	ENSG00000167600	ENST00000310054:c.*31A>G,ENST00000542619:c.*31A>G,ENST00000593545:c.*557A>G,ENST00000593890:c.*240A>G	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs338583	0.32	0.32	0.317	0.321486	0.3002	0.1964	0.2262	0.5825	0.1871	0.29	0.18	0.31	0.54	0.2839	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.105918	NA	NA	0.28	0.54108	NA	0.377	NA	3.4692334
1305	1	172717660	172717660	C	T	intergenic	FASLG,TNFSF18	dist=81648;dist=292700	NA	NA	upstream	ENSG00000229785	NA	NA	NA	NA	NA	1q24.3	NA	NA	NA	NA	rs148702373	0.01	0.01	0.011	0.0091853	0.0308	NA	0.0115	0.003	0.0031	0.03	NA	0.02	0.002	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.337809	NA	NA	NA	NA	NA	0.029	NA	3.4692
1305	11	49893590	49893590	G	A	intergenic	LOC440040,OR4C13	dist=61621;dist=80353	NA	NA	ncRNA_exonic	ENSG00000255214	NA	NA	NA	NA	NA	11p11.12	NA	NA	NA	NA	rs11040609	0.46	0.46	0.386	0.433506	0.5308	0.5556	0.5965	0.1596	0.4622	0.54	0.55	0.62	0.13	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.346415	NA	NA	NA	NA	NA	0.304	NA	3.4692
1305	5	141387336	141387336	G	C	intronic	GNPDA1	NA	NA	NA	intronic	ENSG00000113552	NA	NA	NA	NA	NA	5q31.3	NA	NA	NA	NA	rs2232196	0.14	0.14	0.145	0.148363	0.1938	0.004	0.1124	0.2458	0.1442	0.17	0.0017	0.12	0.26	0.1545	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.054753	NA	NA	0.182674	0.238084	NA	0.239	NA	3.469026
1305	9	99797760	99797760	A	G	intronic	CTSL2	NA	NA	NA	intronic	ENSG00000136943	NA	NA	NA	NA	NA	9q22.33	NA	NA	NA	NA	rs7875800	0.35	0.35	0.35	0.370807	0.1561	0.5387	0.1888	0.5371	0.3231	0.17	0.56	0.19	0.49	0.23	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.147244	NA	NA	0.144884	0.515887	NA	0.268	NA	3.469016
1305	19	54761007	54761007	C	G	intronic	LILRB5	NA	NA	NA	intronic	ENSG00000105609	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs3848615	0.13	0.13	0.098	0.109824	0.1859	0.0258	0.2075	0.0635	0.1115	0.18	0.03	0.22	0.09	0.1525	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.13577	NA	NA	0.192674	0.093736	NA	0.138	NA	3.468926
1305	6	29911356	29911356	G	A	intronic	HLA-A	NA	NA	NA	intronic	ENSG00000206503	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs3132687	0.16	0.16	0.093	0.180112	0.168	0.2798	0.085	0.0825	0.2894	0.18	0.23	0.09	0.08	0.1756	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.152054	NA	NA	0.1875	0.087434	NA	0.239	NA	3.4689
1305	11	6292837	6292837	C	G	UTR3	CCKBR	NM_176875:c.*64C>G	NA	NA	UTR3	ENSG00000110148	ENST00000334619:c.*64C>G,ENST00000532715:c.*64C>G,ENST00000525462:c.*64C>G	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs10839535	0.81	0.81	0.093	0.819688	0.8648	0.9504	0.8617	0.6346	0.8589	0.83	0.93	0.86	0.61	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.404366	NA	NA	NA	NA	NA	NA	NA	3.4685334
1305	10	121201626	121201626	T	C	intronic	GRK5	NA	NA	NA	intronic	ENSG00000198873	NA	NA	NA	NA	NA	10q26.11	NA	Name=PAX5-N19,PAX5-C20	Name=3	NA	rs2275044	0.75	0.75	0.721	0.746206	0.841	0.8462	0.7003	0.5401	0.8569	0.85	0.84	0.72	0.52	0.8264	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.265962	NA	NA	0.86407	0.611439	NA	0.775	NA	3.46853
1305	1	160137300	160137300	A	C	intronic	ATP1A4	NA	NA	NA	intronic	ENSG00000132681	NA	NA	NA	NA	NA	1q23.2	NA	NA	NA	NA	rs4656889	0.58	0.58	0.569	0.577476	0.5318	0.5268	0.6081	0.7042	0.4836	0.54	0.54	0.59	0.67	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.847549	NA	NA	NA	NA	NA	0.601	NA	3.4682
1305	3	183180884	183180884	C	G	intergenic	LOC100505687,KLHL6	dist=7084;dist=24435	NA	NA	ncRNA_exonic	ENSG00000271682	NA	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs6775445	0.54	0.54	0.496	0.528155	0.5318	0.5863	0.4971	0.5393	0.4714	0.53	0.58	0.55	0.51	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.888571	NA	NA	NA	NA	NA	0.486	NA	3.4682
1305	3	192590923	192590923	A	G	intronic	MB21D2	NA	NA	NA	intronic	ENSG00000180611	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs13078909	0.67	0.67	0.682	0.708466	0.5318	0.7708	0.5101	0.8986	0.7096	0.51	0.75	0.56	0.88	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.896688	1.896688	NA	NA	NA	NA	0.63	NA	3.4682
1305	5	76703374	76703374	A	G	intronic	PDE8B	NA	NA	NA	intronic	ENSG00000113231	NA	NA	NA	NA	NA	5q13.3	NA	NA	NA	NA	rs3101866	0.48	0.48	0.481	0.430911	0.5318	0.4683	0.4164	0.4206	0.3129	0.55	0.45	0.44	0.44	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.757266	NA	NA	NA	NA	NA	0.449	NA	3.4682
1305	9	130216951	130216951	G	T	intronic	LRSAM1	NA	NA	NA	intronic	ENSG00000148356	NA	NA	NA	NA	NA	9q33.3	NA	NA	NA	NA	rs2244218	0.36	0.36	0.35	0.340855	0.5318	0.1647	0.281	0.3578	0.3456	0.54	0.13	0.32	0.37	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.882128	NA	NA	NA	NA	NA	0.261	NA	3.4682
1305	12	53294821	53294821	T	G	intronic	KRT8	NA	NA	NA	intronic	ENSG00000170421	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs4351899	0.54	0.54	0.548	0.567692	0.5318	0.6042	0.6167	0.4002	0.7587	0.51	0.64	0.57	0.46	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.085434	NA	NA	NA	NA	NA	0.399	NA	3.4682
1305	17	3638037	3638037	C	T	intronic	ITGAE	NA	NA	NA	intronic	ENSG00000083457	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs184335	0.66	0.66	0.651	0.663938	0.5318	0.5694	0.6873	0.9713	0.4652	0.54	0.59	0.62	0.96	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.079365	NA	NA	NA	NA	NA	0.645	NA	3.4682
1305	19	11915185	11915185	G	A	intronic	ZNF491	NA	NA	NA	intronic	ENSG00000177599	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs7254316	0.61	0.61	0.63	0.611821	0.5318	0.4583	0.5576	0.9221	0.4714	0.54	0.48	0.52	0.92	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.471474	NA	NA	NA	NA	NA	0.572	NA	3.4682
1305	20	25469844	25469844	A	G	intronic	NINL	NA	NA	NA	intronic	ENSG00000101004	NA	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	rs2072977	0.2	0.2	0.181	0.167133	0.1789	0.3562	0.1326	0.0575	0.1329	0.18	0.35	0.16	0.07	0.1684	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.206525	NA	NA	0.184535	0.088062	ID=COSN166505;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.109	NA	3.468165
1305	11	6976988	6976988	A	T	exonic	ZNF215	NA	synonymous SNV	ZNF215:NM_013250:exon7:c.A780T:p.G260G	exonic	ENSG00000149054	NA	synonymous SNV	ENSG00000149054:ENST00000529903:exon5:c.A780T:p.G260G,ENSG00000149054:ENST00000414517:exon6:c.A780T:p.G260G,ENSG00000149054:ENST00000278319:exon7:c.A780T:p.G260G	NA	NA	11p15.4	NA	NA	NA	NA	rs2239731	0.66	0.66	0.637	0.676118	0.7227	0.7133	0.7911	0.4418	0.8252	0.71	0.72	0.79	0.43	0.7343	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.020637	NA	NA	0.741504	0.494548	NA	0.594	NA	3.4681626
1305	17	42979670	42979670	C	A	intronic	CCDC103	NA	NA	NA	intronic	ENSG00000167131,ENSG00000214447	NA	NA	NA	NA	NA	17q21.31	NA	NA	NA	NA	rs8079610	0.26	0.26	0.253	0.24381	0.2624	0.251	0.2291	0.2307	0.2454	0.27	0.28	0.26	0.21	0.2695	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.373678	NA	NA	NA	NA	NA	0.167	NA	3.4681
1305	17	79803433	79803433	G	A	intronic	P4HB	NA	NA	NA	intronic	ENSG00000185624	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs35649520	0.13	0.13	0.115	0.0978435	0.168	0.0903	0.2277	0.0083	0.0624	0.18	0.1	0.21	0.01	0.1725	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.337609	NA	NA	0.19144	0.035406	NA	0.13	NA	3.46806
1305	6	29638434	29638434	A	G	intronic	MOG	NA	NA	NA	intronic	ENSG00000204655	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs1122947	0.15	0.15	0.137	0.138778	0.1839	0.0456	0.1945	0.1641	0.1145	0.16	0.06	0.21	0.19	0.1682	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.520932	NA	NA	0.179956	0.159828	NA	0.116	NA	3.467944
1305	21	48078611	48078611	G	A	intronic	PRMT2	NA	NA	NA	intronic	ENSG00000160310	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs2070436	0.18	0.18	0.162	0.178315	0.172	0.3194	0.2435	0.0106	0.2198	0.17	0.31	0.22	0.01	0.1864	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.986742	NA	NA	0.173837	0.042215	NA	0.188	NA	3.467763
1305	2	170911950	170911950	T	C	intronic	UBR3	NA	NA	NA	intronic	ENSG00000144357	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	rs6741614	0.21	0.21	0.196	0.240815	0.164	0.3621	0.1412	0.1604	0.3742	0.16	0.34	0.17	0.15	0.2005	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.205257	2.205257	NA	0.167791	0.163867	NA	0.13	NA	3.467709
1305	6	33561164	33561164	C	T	upstream	LINC00336	NA	NA	NA	upstream	ENSG00000197251	NA	NA	NA	NA	NA	6p21.31	NA	Name=Pol2-4H8,ERalpha_a,Pol2,Nrf1,PAX5-C20	Name=25	NA	rs210163	0.81	0.81	0.792	0.842652	0.6809	0.9692	0.8069	0.8321	0.9182	0.68	0.96	0.81	0.82	0.7861	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.165932	NA	NA	0.732406	0.82575	NA	0.812	NA	3.4672606
1305	1	201356428	201356428	C	A	intronic	LAD1	NA	NA	NA	intronic	ENSG00000159166	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs4915230	0.44	0.44	0.384	0.430312	0.5328	0.4802	0.6095	0.0703	0.6329	0.54	0.51	0.57	0.1	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.610999	NA	NA	NA	NA	NA	0.362	NA	3.4672
1305	10	135013208	135013208	C	G	intronic	KNDC1	NA	NA	NA	intronic	ENSG00000171798	NA	NA	NA	NA	NA	10q26.3	NA	NA	NA	NA	rs2998138	0.55	0.55	0.532	0.562899	0.5328	0.6161	0.4957	0.5287	0.6329	0.55	0.64	0.51	0.47	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.065909	NA	NA	NA	NA	NA	0.58	NA	3.4672
1305	12	120586193	120586193	A	C	intronic	GCN1L1	NA	NA	NA	intronic	ENSG00000089154	NA	NA	NA	NA	NA	12q24.23	NA	NA	NA	NA	rs2240317	0.35	0.35	0.348	0.344249	0.1551	0.5565	0.1484	0.5159	0.227	0.16	0.57	0.17	0.54	0.2279	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3131	NA	NA	0.149822	0.43267	NA	0.225	NA	3.467178
1305	17	39506659	39506659	G	A	intronic	KRT33A	NA	NA	NA	intronic	ENSG00000006059	NA	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs16966713	0.17	0.17	0.162	0.159744	0.1849	0.3204	0.1282	0.0257	0.1718	0.18	0.31	0.14	0.03	0.1629	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.080832	NA	NA	0.185116	0.052202	NA	0.109	NA	3.467084
1305	7	131155588	131155588	G	T	intronic	MKLN1	NA	NA	NA	intronic	ENSG00000128585	NA	NA	NA	Score=278;Name=lod=18	NA	7q32.3	NA	NA	NA	NA	rs1733861	0.56	0.56	0.564	0.554313	0.4851	0.6776	0.4597	0.6543	0.4305	0.49	0.68	0.4	0.63	0.5236	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.067	2.067	NA	0.524319	0.63779	NA	0.507	NA	3.466981
1305	3	10015437	10015437	T	C	intronic	EMC3	NA	NA	NA	intronic	ENSG00000125037	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs3732967	0.24	0.24	0.235	0.241813	0.1481	0.1319	0.2478	0.3986	0.2352	0.16	0.18	0.26	0.43	0.204	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.291482	NA	NA	0.18093	0.352928	ID=COSN166810;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.391	NA	3.46697
1305	19	971933	971933	A	G	exonic	ARID3A	NA	synonymous SNV	ARID3A:NM_005224:exon9:c.A1650G:p.G550G	exonic	ENSG00000116017	NA	synonymous SNV	ENSG00000116017:ENST00000263620:exon9:c.A1650G:p.G550G	NA	NA	19p13.3	NA	NA	NA	NA	rs1051504	0.63	0.63	0.577	0.594848	0.7674	0.4871	0.549	0.6248	0.5204	0.75	0.48	0.62	0.61	0.659	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.841944	NA	NA	0.77349	0.642012	NA	0.435	NA	3.4667766
1305	11	18487404	18487404	A	G	intronic	LDHAL6A	NA	NA	NA	intronic	ENSG00000166800	NA	NA	NA	NA	NA	11p15.1	NA	NA	NA	NA	rs72870279	0.11	0.11	0.102	0.103834	0.1889	0.0645	0.1729	0.0083	0.137	0.18	0.06	0.18	0.03	0.1563	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.086806	NA	NA	0.188213	0.040946	NA	0.087	NA	3.466587
1305	20	25436283	25436283	C	G	intronic	NINL	NA	NA	NA	intronic	ENSG00000101004	NA	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	rs2235607	0.2	0.2	0.189	0.163339	0.1799	0.3522	0.1326	0.0575	0.1166	0.18	0.35	0.16	0.07	0.1682	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.123232	NA	NA	0.185349	0.088062	ID=COSN166503;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.109	NA	3.466551
1305	6	30229306	30229306	A	G	ncRNA_intronic	HCG17,HLA-L	NA	NA	NA	ncRNA_intronic	ENSG00000243753,ENSG00000270604	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs2428507	0.44	0.44	0.385	0.488419	0.3757	0.5794	0.5173	0.4251	0.5757	0.35	0.54	0.5	0.41	0.4336	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.456603	1.456603	NA	0.390919	0.395433	NA	0.529	NA	3.4664476
1305	15	34032225	34032225	G	C	intronic	RYR3	NA	NA	NA	intronic	ENSG00000198838	NA	NA	NA	NA	NA	15q14	NA	NA	NA	NA	rs61219904	0.21	0.21	0.209	0.234026	0.1839	0.1647	0.1787	0.2988	0.3088	0.16	0.18	0.19	0.34	0.1883	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.425861	NA	NA	0.161357	0.25142	NA	0.29	NA	3.466443
1305	7	888290	888290	A	T	intronic	SUN1	NA	NA	NA	intronic	ENSG00000164828	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs75133066	0.16	0.16	0.137	0.172724	0.1859	0.1369	0.2378	0.0923	0.2587	0.18	0.16	0.24	0.09	0.1863	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.518418	NA	NA	0.161477	0.102169	NA	0.13	NA	3.466323
1305	1	1848109	1848109	G	C	intronic	CALML6	NA	NA	NA	intronic	ENSG00000169885	NA	NA	NA	NA	NA	1p36.33	NA	NA	NA	NA	rs2803296	0.55	0.55	0.509	0.585463	0.5338	0.6359	0.6167	0.5159	0.6585	0.54	0.6	0.61	0.48	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.353945	NA	NA	NA	NA	NA	0.442	NA	3.4662
1305	5	180056192	180056192	T	C	intronic	FLT4	NA	NA	NA	intronic	ENSG00000037280	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs399108	0.47	0.47	0.455	0.466853	0.5338	0.3155	0.598	0.441	0.4959	0.53	0.31	0.57	0.49	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.290367	NA	NA	NA	NA	NA	0.384	NA	3.4662
1305	7	99501313	99501313	A	T	intronic	TRIM4	NA	NA	NA	intronic	ENSG00000146833	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs2572003	0.55	0.55	0.564	0.578674	0.5338	0.2976	0.4597	0.9039	0.5593	0.55	0.28	0.5	0.89	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.517207	NA	NA	NA	NA	NA	0.609	NA	3.4662
1305	9	139405361	139405361	A	G	intronic	NOTCH1	NA	NA	NA	intronic	ENSG00000148400	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs3125002	0.72	0.72	0.724	0.721246	0.5338	0.8849	0.5951	0.9395	0.5399	0.53	0.86	0.6	0.94	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.303655	NA	NA	NA	NA	NA	0.63	NA	3.4662
1305	12	108600237	108600237	A	G	intronic	WSCD2	NA	NA	NA	intronic	ENSG00000075035	NA	NA	NA	NA	NA	12q23.3	NA	NA	NA	NA	rs1106752	0.56	0.56	0.55	0.580871	0.5338	0.6042	0.5821	0.6241	0.546	0.55	0.56	0.52	0.58	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.069055	NA	NA	NA	NA	NA	0.616	NA	3.4662
1305	16	58538662	58538662	C	T	intronic	NDRG4	NA	NA	NA	intronic	ENSG00000103034	NA	NA	NA	NA	NA	16q21	NA	NA	NA	NA	rs9928398	0.75	0.75	0.757	0.76877	0.5338	0.9067	0.7176	0.9032	0.7229	0.55	0.9	0.69	0.92	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.232507	NA	NA	NA	NA	NA	0.623	NA	3.4662
1305	19	7976112	7976112	G	A	intronic	MAP2K7	NA	NA	NA	intronic	ENSG00000076984	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs7260355	0.1	0.1	0.081	0.0854633	0.1869	0.001	0.1657	0.0174	0.1033	0.19	0.01	0.18	0.02	0.1627	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.3903	1.3903	NA	0.184398	0.040666	NA	0.116	NA	3.466002
1305	7	101916647	101916647	A	G	exonic	CUX1	NA	synonymous SNV	CUX1:NM_001202544:exon14:c.A1218G:p.A406A,CUX1:NM_001202545:exon14:c.A1128G:p.A376A,CUX1:NM_001202546:exon14:c.A1149G:p.A383A,CUX1:NM_001913:exon15:c.A1266G:p.A422A,CUX1:NM_181500:exon15:c.A1260G:p.A420A	exonic	ENSG00000257923	NA	synonymous SNV	ENSG00000257923:ENST00000393824:exon14:c.A1149G:p.A383A,ENSG00000257923:ENST00000425244:exon14:c.A1128G:p.A376A,ENSG00000257923:ENST00000547394:exon14:c.A1218G:p.A406A,ENSG00000257923:ENST00000292538:exon15:c.A1266G:p.A422A,ENSG00000257923:ENST00000437600:exon15:c.A1260G:p.A420A	NA	NA	7q22.1	NA	NA	NA	NA	rs813000	0.73	0.73	0.75	0.733626	0.7227	0.5188	0.6599	0.9796	0.6861	0.75	0.51	0.72	0.98	0.7296	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.962345	NA	NA	0.748488	0.928734	NA	0.754	NA	3.4658786
1305	11	1156750	1156750	C	A	intergenic	MUC2,MUC5B	dist=52333;dist=87545	NA	NA	intronic	ENSG00000215182	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs36021067	0.12	0.12	0.116	0.10643	0.2008	0.003	0.0965	0.1543	0.0583	0.2	0.0035	0.12	0.15	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.791552	NA	NA	NA	NA	NA	0.123	NA	3.4658667
1305	14	20825965	20825965	A	C	UTR3	PARP2	NM_001042618:c.*9A>C,NM_005484:c.*9A>C	NA	NA	UTR3	ENSG00000129484	ENST00000429687:c.*9A>C,ENST00000250416:c.*9A>C,ENST00000527915:c.*282A>C	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs2700	0.22	0.22	0.199	0.23722	0.2952	0.2708	0.2291	0.0492	0.4029	0.29	0.25	0.24	0.07	0.2799	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.760696	NA	NA	0.292584	0.098028	NA	0.196	NA	3.4656494
1305	2	198953816	198953816	G	A	intronic	PLCL1	NA	NA	NA	intronic	ENSG00000115896	NA	NA	NA	NA	NA	2q33.1	NA	NA	NA	NA	rs3213867	0.17	0.17	0.161	0.139377	0.1899	0.2431	0.1628	0.0484	0.0869	0.18	0.24	0.18	0.05	0.1701	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.118685	NA	NA	0.174535	0.06355	NA	0.058	NA	3.465465
1305	6	80036302	80036302	A	C	intergenic	LOC100288198,LCA5	dist=89785;dist=158406	NA	NA	ncRNA_exonic	ENSG00000217786	NA	NA	NA	NA	NA	6q14.1	NA	NA	NA	NA	rs4706773	0.69	0.69	0.708	0.731629	0.5348	0.8075	0.5764	0.9531	0.6667	0.52	0.78	0.57	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.636998	NA	NA	NA	NA	NA	0.601	NA	3.4652
1305	1	32157531	32157531	T	C	intronic	COL16A1	NA	NA	NA	intronic	ENSG00000084636	NA	NA	NA	NA	NA	1p35.2	NA	NA	NA	NA	rs2297676	0.33	0.33	0.323	0.303914	0.5348	0.124	0.2896	0.3003	0.2669	0.53	0.09	0.36	0.3	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.268627	NA	NA	NA	NA	NA	0.341	NA	3.4652
1305	8	131812899	131812899	G	T	intronic	ADCY8	NA	NA	NA	intronic	ENSG00000155897	NA	NA	NA	NA	NA	8q24.22	NA	NA	NA	NA	rs263237	0.59	0.59	NA	0.614417	0.5348	0.6022	0.5216	0.733	0.6145	0.55	0.6	0.48	0.73	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.703295	NA	NA	NA	NA	NA	0.601	NA	3.4652
1305	21	42824874	42824874	C	T	intronic	MX1	NA	NA	NA	intronic	ENSG00000157601	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs467798	0.28	0.28	0.256	0.275359	0.5348	0.006	0.3141	0.1967	0.365	0.51	0.0017	0.34	0.19	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.667222	NA	NA	NA	NA	NA	0.355	NA	3.4652
1306	2	69330118	69330118	A	G	intronic	ANTXR1	NA	NA	NA	intronic	ENSG00000169604	NA	NA	NA	NA	NA	2p13.3	NA	NA	NA	NA	rs6710260	0.35	0.35	0.377	0.361422	0.165	0.2222	0.2637	0.8306	0.1421	0.15	0.27	0.27	0.82	0.2169	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.67098	NA	NA	0.153256	0.699728	NA	0.326	NA	3.464844
1306	7	100456595	100456595	G	A	intronic	SLC12A9	NA	NA	NA	intronic	ENSG00000146828	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs314373	0.11	0.11	0.093	0.091254	0.1899	0.0327	0.1052	0.0416	0.1074	0.2	0.03	0.12	0.04	0.1584	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.51635	NA	NA	0.187209	0.056968	NA	0.116	NA	3.464491
1306	1	232538234	232538234	T	G	intronic	SIPA1L2	NA	NA	NA	intronic	ENSG00000116991	NA	NA	NA	NA	NA	1q42.2	NA	NA	NA	NA	rs17177525	0.1	0.1	0.086	0.0984425	0.1889	0.001	0.1311	0.0696	0.1217	0.18	NA	0.14	0.07	0.1538	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.428437	NA	NA	0.193068	0.084013	NA	0.116	NA	3.464232
1306	7	44189321	44189321	A	G	intronic	GCK	NA	NA	NA	intronic	ENSG00000106633	NA	NA	NA	NA	NA	7p13	NA	Name=RFX5_(N-494)	NA	NA	rs2268574	0.62	0.62	0.607	0.605032	0.5149	0.623	0.6167	0.7799	0.4346	0.5	0.63	0.58	0.79	0.5295	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.064033	NA	NA	0.491395	0.717885	NA	0.63	NA	3.464205
1306	6	34158331	34158331	T	G	intergenic	GRM4,HMGA1	dist=34932;dist=46246	NA	NA	ncRNA_exonic	ENSG00000271231	NA	NA	NA	NA	NA	6p21.31	NA	NA	NA	NA	rs1776888	0.66	0.66	0.647	0.657348	0.5358	0.7321	0.683	0.736	0.5808	0.54	0.74	0.68	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.257228	NA	NA	NA	NA	NA	0.761	NA	3.4642
1306	9	90038463	90038463	C	G	intergenic	C9orf170,DAPK1	dist=263822;dist=74293	NA	NA	upstream	ENSG00000228373	NA	NA	NA	NA	NA	9q21.33	NA	NA	NA	NA	rs34845209	0.04	0.04	0.039	0.0479233	0.0358	0.0129	0.0317	0.1112	0.0225	0.02	0.02	0.04	0.1	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.746404	NA	NA	NA	NA	NA	0.072	NA	3.4642
1306	12	51864979	51864979	T	C	intronic	SLC4A8	NA	NA	NA	intronic	ENSG00000050438	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs2292217	0.5	0.5	0.502	0.520367	0.5358	0.4643	0.4308	0.5605	0.5716	0.53	0.47	0.49	0.5	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.234987	NA	NA	NA	NA	NA	0.594	NA	3.4642
1306	12	51869098	51869098	G	A	intronic	SLC4A8	NA	NA	NA	intronic	ENSG00000050438	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs868884	0.5	0.5	0.513	0.517971	0.5358	0.4534	0.4308	0.5598	0.5716	0.53	0.46	0.49	0.5	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.581188	NA	NA	NA	NA	NA	0.594	NA	3.4642
1306	17	28410124	28410124	T	C	intronic	EFCAB5	NA	NA	NA	intronic	ENSG00000176927	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs12941382	0.44	0.44	0.435	0.448882	0.5358	0.2867	0.4294	0.5325	0.4274	0.53	0.29	0.44	0.5	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.930058	2.930058	NA	NA	NA	NA	0.341	NA	3.4642
1306	11	63176367	63176367	G	A	ncRNA_intronic	MIR3680-1,MIR3680-2	NA	NA	NA	intronic	ENSG00000149742	NA	NA	NA	NA	NA	11q12.3	NA	NA	NA	NA	rs4088469	0.51	0.51	0.496	0.534944	0.2614	0.8413	0.5101	0.5303	0.5245	0.27	0.84	0.45	0.54	0.3717	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.117187	NA	NA	0.23604	0.509995	NA	0.391	NA	3.4641933
1306	5	149221788	149221788	G	C	intronic	PPARGC1B	NA	NA	NA	intronic	ENSG00000155846	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs26127	0.3	0.3	0.267	NA	NA	NA	NA	NA	NA	0.22	0.27	0.32	0.42	0.2984	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.860694	NA	NA	0.237558	0.430776	NA	0.29	NA	3.464042
1306	1	111893958	111893958	A	G	UTR3	PIFO	NM_181643:c.*9A>G	NA	NA	UTR3	ENSG00000173947	ENST00000369738:c.*9A>G,ENST00000369737:c.*9A>G	NA	NA	NA	NA	1p13.2	NA	NA	NA	NA	rs1668	0.26	0.26	0.271	0.294928	0.2863	0.3224	0.17	0.2708	0.3967	0.29	0.29	0.22	0.23	0.2876	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.104924	NA	NA	0.295465	0.270994	NA	0.217	NA	3.4639684
1306	3	129044006	129044006	T	C	downstream	H1FX-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000206417	NA	NA	NA	NA	NA	3q21.3	NA	NA	NA	NA	rs10934882	0.54	0.54	0.476	0.489816	0.7028	0.5823	0.5965	0.1172	0.6033	0.71	0.62	0.62	0.13	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.457391	NA	NA	NA	NA	NA	0.594	NA	3.4638666
1306	20	25252161	25252161	C	T	intronic	PYGB	NA	NA	NA	intronic	ENSG00000100994	NA	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	rs2281559	0.2	0.2	0.185	0.16274	0.1849	0.3532	0.1326	0.0567	0.1084	0.19	0.35	0.16	0.06	0.1662	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.676404	NA	NA	0.185116	0.08148	ID=COSN166502;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.094	NA	3.463784
1306	1	173552783	173552783	G	A	intronic	SLC9C2	NA	NA	NA	ncRNA_intronic	ENSG00000238272	NA	NA	NA	NA	NA	1q25.1	NA	NA	NA	NA	rs12032386	0.5	0.5	0.491	0.525958	0.2614	0.6895	0.415	0.7398	0.4192	0.27	0.66	0.39	0.76	0.3569	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.559775	NA	NA	0.251283	0.649909	NA	0.471	NA	3.4637503
1306	4	8304137	8304137	G	A	intronic	HTRA3	NA	NA	NA	intronic	ENSG00000170801	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs13144236	0.24	0.24	0.252	0.270168	0.2575	0.1687	0.245	0.27	0.4059	0.25	0.18	0.26	0.27	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.380488	NA	NA	0.278755	0.293353	NA	0.225	NA	3.463745
1306	5	16684109	16684109	T	C	intronic	MYO10	NA	NA	NA	intronic	ENSG00000145555	NA	NA	NA	NA	NA	5p15.1	NA	NA	NA	NA	rs2303703	0.24	0.24	0.239	0.261781	0.2525	0.2083	0.245	0.2549	0.3476	0.25	0.23	0.28	0.24	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.714423	NA	NA	0.283784	0.261561	NA	0.29	NA	3.463716
1306	8	125082585	125082585	G	A	intronic	FER1L6	NA	NA	NA	ncRNA_intronic	ENSG00000253868	NA	NA	NA	NA	NA	8q24.13	NA	NA	NA	NA	rs7836974	0.8	0.8	0.815	0.796526	0.8698	0.6627	0.7205	0.8646	0.8211	0.86	0.7	0.75	0.88	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.183609	NA	NA	NA	NA	NA	0.906	NA	3.4635333
1306	3	10420875	10420875	G	A	intronic	ATP2B2	NA	NA	NA	intronic	ENSG00000157087	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs4684686	0.41	0.41	0.442	0.410343	0.2714	0.6538	0.3329	0.3381	0.455	0.27	0.7	0.31	0.37	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.625089	NA	NA	0.265075	0.367666	NA	0.348	NA	3.463525
1306	13	31728703	31728703	T	C	intronic	HSPH1	NA	NA	NA	intronic	ENSG00000120694	NA	NA	NA	NA	NA	13q12.3	NA	NA	NA	NA	rs2274019	0.34	0.34	0.319	0.347244	0.2406	0.4752	0.3818	0.27	0.4049	0.24	0.53	0.36	0.25	0.2961	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.51075	NA	NA	NA	NA	NA	0.261	NA	3.4633
1306	5	37350390	37350390	C	A	intronic	NUP155	NA	NA	NA	intronic	ENSG00000113569	NA	NA	NA	NA	NA	5p13.2	NA	NA	NA	NA	rs217776	0.28	0.28	0.301	0.33766	0.1511	0.123	0.219	0.7912	0.2219	0.15	0.08	0.23	0.74	0.226	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.253595	NA	NA	0.159651	0.690195	NA	0.312	NA	3.463249
1306	1	200959052	200959052	T	G	intronic	KIF21B	NA	NA	NA	intronic	ENSG00000116852	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs57758014	0.26	0.26	0.262	0.263778	0.1541	0.2976	0.2032	0.4531	0.1288	0.16	0.32	0.17	0.41	0.2043	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.795739	NA	NA	0.178372	0.423706	NA	0.232	NA	3.463228
1306	5	167653364	167653364	T	C	intronic	TENM2	NA	NA	NA	intronic	ENSG00000145934	NA	NA	NA	NA	NA	5q34	NA	NA	NA	NA	rs3733985	0.64	0.64	0.649	0.665335	0.5368	0.6438	0.585	0.9206	0.5317	0.51	0.63	0.57	0.89	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.080645	NA	NA	NA	NA	NA	0.703	NA	3.4632
1306	8	1857366	1857366	G	A	intronic	ARHGEF10	NA	NA	NA	intronic	ENSG00000104728	NA	NA	NA	NA	NA	8p23.3	NA	NA	NA	NA	rs2294036	0.47	0.47	0.509	0.560104	0.5368	0.5288	0.4942	0.6543	0.5358	0.46	0.45	0.46	0.51	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.232572	NA	NA	NA	NA	NA	NA	NA	3.4632
1306	8	1857367	1857367	T	C	intronic	ARHGEF10	NA	NA	NA	intronic	ENSG00000104728	NA	NA	NA	NA	NA	8p23.3	NA	NA	NA	NA	rs2294037	0.47	0.47	0.51	0.560104	0.5368	0.5288	0.4942	0.6543	0.5358	0.47	0.46	0.46	0.51	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.508279	NA	NA	NA	NA	NA	NA	NA	3.4632
1306	11	118983681	118983681	C	T	intronic	C2CD2L	NA	NA	NA	intronic	ENSG00000172375	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs682795	0.54	0.54	0.547	0.579473	0.5368	0.2788	0.7061	0.7784	0.5746	0.54	0.25	0.67	0.8	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.663933	NA	NA	NA	NA	NA	0.543	NA	3.4632
1306	11	130332338	130332338	A	G	intronic	ADAMTS15	NA	NA	NA	intronic	ENSG00000166106	NA	NA	NA	NA	NA	11q24.3	NA	NA	NA	NA	rs11604959	0.49	0.49	0.503	0.470447	0.5368	0.37	0.3761	0.559	0.453	0.54	0.39	0.41	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.900591	NA	NA	NA	NA	NA	0.572	NA	3.4632
1306	12	124360117	124360117	G	T	intronic	DNAH10	NA	NA	NA	intronic	ENSG00000197653	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs10846567	0.47	0.47	0.469	0.479034	0.5368	0.2847	0.5245	0.5719	0.4622	0.54	0.29	0.54	0.53	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.267427	NA	NA	NA	NA	NA	0.442	NA	3.4632
1306	12	124364441	124364441	T	A	intronic	DNAH10	NA	NA	NA	intronic	ENSG00000197653	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs1882489	0.47	0.47	0.472	0.472644	0.5368	0.2877	0.5216	0.5477	0.4611	0.54	0.29	0.54	0.53	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.100098	NA	NA	NA	NA	NA	0.413	NA	3.4632
1306	7	20691013	20691013	C	T	intronic	ABCB5	NA	NA	NA	intronic	ENSG00000004846	NA	NA	NA	NA	NA	7p21.1	NA	NA	NA	NA	rs3213623	0.25	0.25	0.248	0.289337	0.1551	0.2034	0.2406	0.4985	0.2679	0.16	0.2	0.23	0.45	0.2182	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.26249	2.26249	NA	0.163605	0.465275	NA	0.283	NA	3.463095
1306	7	47872845	47872845	A	G	exonic	PKD1L1	NA	synonymous SNV	PKD1L1:NM_138295:exon41:c.T6180C:p.P2060P	exonic	ENSG00000158683	NA	synonymous SNV	ENSG00000158683:ENST00000289672:exon41:c.T6180C:p.P2060P	NA	NA	7p12.3	NA	NA	NA	NA	rs921634	0.76	0.76	0.755	0.730631	0.7346	0.9028	0.7305	0.6505	0.6575	0.73	0.89	0.75	0.67	0.7333	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.006259	NA	NA	0.735814	0.670222	ID=COSM1162465;OCCURENCE=1(pancreas)	0.761	NA	3.4629526
1306	11	72288664	72288664	C	T	intronic	PDE2A	NA	NA	NA	intronic	ENSG00000186642	NA	NA	NA	NA	NA	11q13.4	Score=876;Name=V$COUP_01	NA	NA	NA	rs1980090	0.67	0.67	0.672	0.682508	0.4871	0.752	0.6787	0.8283	0.6176	0.51	0.78	0.63	0.83	0.5742	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.441834	NA	NA	0.475775	0.757045	NA	0.638	NA	3.462925
1306	9	99799056	99799056	A	C	intronic	CTSL2	NA	NA	NA	intronic	ENSG00000136943	NA	NA	NA	NA	NA	9q22.33	NA	NA	NA	NA	rs10980241	0.35	0.35	0.372	0.370607	0.159	0.5387	0.1888	0.5348	0.3221	0.17	0.56	0.19	0.49	0.2335	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.812385	NA	NA	0.144767	0.514299	NA	0.268	NA	3.462733
1306	1	243471192	243471192	A	G	intronic	SDCCAG8	NA	NA	NA	intronic	ENSG00000054282	NA	NA	NA	NA	NA	1q43	NA	NA	NA	NA	rs953492	0.57	0.57	0.582	0.513978	0.5378	0.7391	0.6081	0.3434	0.4213	0.54	0.74	0.6	0.39	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.614235	NA	NA	NA	NA	NA	0.478	NA	3.4622
1306	3	73004157	73004157	T	G	intronic	GXYLT2	NA	NA	NA	intronic	ENSG00000172986	NA	NA	NA	NA	NA	3p13	NA	NA	NA	NA	rs1532190	0.29	0.29	0.254	0.275759	0.5378	0.1409	0.366	0.0416	0.3978	0.53	0.13	0.38	0.04	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.568411	NA	NA	NA	NA	NA	0.181	NA	3.4622
1306	15	33757840	33757840	G	A	intronic	RYR3	NA	NA	NA	intronic	ENSG00000198838	NA	NA	NA	NA	NA	15q14	NA	NA	NA	NA	rs2596163	0.59	0.59	0.607	0.591653	0.5378	0.5119	0.5778	0.7519	0.5225	0.54	0.53	0.58	0.75	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.587704	NA	NA	NA	NA	NA	0.652	NA	3.4622
1306	17	45750596	45750596	G	A	intronic	KPNB1	NA	NA	NA	intronic	ENSG00000108424	NA	NA	NA	NA	NA	17q21.32	NA	NA	NA	NA	rs3809868	0.56	0.56	0.549	0.544529	0.5378	0.6657	0.6556	0.3767	0.5746	0.53	0.65	0.6	0.46	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.016159	NA	NA	NA	NA	NA	0.58	NA	3.4622
1306	19	11129429	11129429	C	G	intronic	SMARCA4	NA	NA	NA	intronic	ENSG00000127616	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs10417443	0.71	0.71	0.758	0.716054	0.5378	0.8065	0.4625	0.9743	0.637	0.53	0.86	0.51	0.97	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.077659	NA	NA	NA	NA	NA	0.667	NA	3.4622
1306	19	35294385	35294385	A	G	intergenic	ZNF599,LOC400685	dist=30251;dist=12673	NA	NA	ncRNA_intronic	ENSG00000267767	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs11670866	0.55	0.55	0.544	0.537939	0.5378	0.5575	0.3746	0.6127	0.5327	0.55	0.56	0.46	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.23543	NA	NA	NA	NA	NA	0.638	NA	3.4622
1306	20	23064810	23064810	C	T	intronic	CD93	NA	NA	NA	intronic	ENSG00000125810	NA	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	rs11087413	0.56	0.56	0.534	0.567492	0.5378	0.7808	0.621	0.326	0.6667	0.52	0.79	0.58	0.33	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.70371	NA	NA	NA	NA	NA	0.58	NA	3.4622
1306	1	204242731	204242731	C	A	intronic	PLEKHA6	NA	NA	NA	intronic	ENSG00000143850	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs35803438	0.2	0.2	0.189	0.20028	0.1769	0.2946	0.2406	0.1278	0.1963	0.17	0.26	0.23	0.14	0.1893	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.062752	NA	NA	0.17186	0.143214	ID=COSN163407;OCCURENCE=1(breast),1(endometrium)	0.196	NA	3.46194
1306	6	125621645	125621645	C	T	intronic	HDDC2	NA	NA	NA	intronic	ENSG00000111906	NA	NA	NA	NA	NA	6q22.31	NA	NA	NA	NA	rs2243389	0.26	0.26	0.281	0.258586	0.174	0.1429	0.2219	0.562	0.0808	0.16	0.13	0.24	0.59	0.1846	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.352283	NA	NA	0.179571	0.497932	ID=COSN167886;OCCURENCE=1(large_intestine)	0.261	NA	3.461829
1306	7	42977243	42977243	T	C	UTR3	MRPL32	NM_031903:c.*68T>C	NA	NA	UTR3	ENSG00000106591	ENST00000223324:c.*68T>C,ENST00000413995:c.*389T>C	NA	NA	NA	NA	7p14.1	NA	NA	NA	NA	rs631928	0.86	0.86	0.848	0.85004	0.8718	0.9107	0.7637	0.7806	0.9202	0.88	0.91	0.82	0.79	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.156669	NA	NA	NA	NA	NA	0.891	NA	3.4615334
1306	8	125088636	125088636	A	G	intronic	FER1L6	NA	NA	NA	ncRNA_intronic	ENSG00000253868	NA	NA	NA	NA	NA	8q24.13	NA	NA	NA	NA	rs9643188	0.82	0.82	0.822	0.809704	0.8718	0.6944	0.7219	0.8858	0.8241	0.86	0.73	0.75	0.9	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.2378	NA	NA	NA	NA	NA	0.906	NA	3.4615333
1306	8	91963472	91963472	T	G	intronic	NECAB1	NA	NA	NA	intronic	ENSG00000123119	NA	NA	NA	NA	NA	8q21.3	NA	NA	NA	NA	rs71528761	0.28	0.28	NA	0.255391	0.2654	0.3482	0.3963	0.1157	0.2382	0.26	0.36	0.37	0.16	0.2734	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.448437	NA	NA	NA	NA	NA	NA	NA	3.4612
1306	17	38142677	38142677	A	C	intronic	PSMD3	NA	NA	NA	intronic	ENSG00000108344	NA	NA	NA	NA	NA	17q21.1	NA	NA	NA	NA	rs3816472	0.55	0.55	0.569	0.551917	0.5388	0.4325	0.5807	0.6747	0.502	0.54	0.41	0.6	0.69	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.097203	NA	NA	NA	NA	NA	0.645	NA	3.4612
1306	17	48655493	48655493	A	G	intronic	CACNA1G	NA	NA	NA	intronic	ENSG00000006283	NA	NA	NA	NA	NA	17q21.33	NA	NA	NA	NA	rs198551	0.68	0.68	0.68	0.69369	0.5388	0.9355	0.6282	0.6513	0.7076	0.54	0.94	0.59	0.66	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.568957	NA	NA	NA	NA	NA	0.587	NA	3.4612
1306	6	152522926	152522926	G	A	intronic	SYNE1	NA	NA	NA	intronic	ENSG00000131018	NA	NA	NA	NA	NA	6q25.2	NA	NA	NA	NA	rs2253512	0.14	0.14	0.132	0.134585	0.2127	0.1419	0.147	0.0605	0.138	0.2	0.13	0.17	0.05	0.1496	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.727226	NA	NA	0.176744	0.067181	NA	0.123	NA	3.460956
1306	19	45690460	45690460	A	G	intergenic	BLOC1S3,EXOC3L2	dist=5402;dist=25419	NA	NA	intronic	ENSG00000007047,ENSG00000267545	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs12974200	0.12	0.12	0.105	0.125399	0.2058	0.0258	0.2305	0.0461	0.1779	0.21	0.02	0.19	0.04	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.5685	NA	NA	NA	NA	NA	0.109	NA	3.4608667
1306	20	47691445	47691445	C	T	intronic	CSE1L	NA	NA	NA	intronic	ENSG00000124207	NA	NA	NA	NA	NA	20q13.13	NA	NA	NA	NA	rs3092153	0.31	0.31	0.273	0.290935	0.2753	0.4802	0.3573	0.0764	0.3548	0.27	0.51	0.32	0.12	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.927124	1.927124	NA	0.263836	0.125	ID=COSN166565;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.37	NA	3.460864
1306	17	48269302	48269302	G	A	intronic	COL1A1	NA	NA	NA	intronic	ENSG00000108821	NA	NA	NA	NA	NA	17q21.33	NA	Name=Pol2	Name=13	NA	rs2857396	0.9	0.9	0.888	0.908347	0.832	0.9851	0.9207	0.9009	0.909	0.83	0.98	0.91	0.89	0.8735	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.123216	NA	NA	0.833953	0.884476	NA	0.87	NA	3.460547
1306	7	42959199	42959199	G	C	intronic	PSMA2	NA	NA	NA	ncRNA_exonic	ENSG00000234983	NA	NA	NA	NA	NA	7p14.1	NA	NA	NA	NA	rs653853	0.86	0.86	0.861	0.850639	0.8728	0.9097	0.7666	0.7814	0.9202	0.88	0.91	0.82	0.79	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.082964	NA	NA	NA	NA	NA	0.891	NA	3.4605333
1306	3	10264299	10264299	C	T	intronic	IRAK2	NA	NA	NA	intronic	ENSG00000134070	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs813591	0.33	0.33	0.323	0.373203	0.1491	0.6399	0.2738	0.3306	0.4571	0.14	0.63	0.25	0.36	0.2553	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.543951	NA	NA	0.135116	0.310486	NA	0.246	NA	3.460484
1306	17	10267610	10267610	C	T	intronic	MYH13	NA	NA	NA	intronic	ENSG00000006788	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs4791981	0.14	0.14	0.141	0.177716	0.1759	0.0595	0.1398	0.1921	0.3088	0.17	0.06	0.14	0.2	0.1912	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.870437	NA	NA	0.172544	0.170673	NA	0.181	NA	3.460356
1306	2	160073895	160073895	G	C	intronic	TANC1	NA	NA	NA	intronic	ENSG00000115183	NA	NA	NA	NA	NA	2q24.2	NA	NA	NA	NA	rs4665042	0.26	0.26	0.243	0.202077	0.5398	0.0476	0.2939	0.025	0.1881	0.53	0.05	0.33	0.04	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.582289	NA	NA	NA	NA	NA	0.29	NA	3.4602
1306	11	105844923	105844923	C	A	intronic	GRIA4	NA	NA	NA	intronic	ENSG00000152578	NA	NA	NA	NA	NA	11q22.3	NA	NA	NA	NA	rs509512	0.6	0.6	0.572	0.593251	0.5398	0.6141	0.6542	0.5953	0.5808	0.55	0.62	0.65	0.62	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.941587	1.941587	NA	NA	NA	NA	0.529	NA	3.4602
1306	16	70400857	70400857	A	G	intronic	DDX19A	NA	NA	NA	intronic	ENSG00000168872	NA	NA	NA	NA	NA	16q22.1	NA	NA	NA	NA	rs8058224	0.55	0.55	0.547	0.535743	0.5398	0.4345	0.4409	0.826	0.3108	0.53	0.41	0.46	0.8	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.872321	NA	NA	NA	NA	NA	0.5	NA	3.4602
1306	4	1732695	1732695	G	C	intronic	TACC3	NA	NA	NA	intronic	ENSG00000013810	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs4577642	0.13	0.13	0.119	0.139377	0.1759	0.0119	0.1239	0.202	0.1595	0.17	0.01	0.13	0.2	0.1619	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.294445	NA	NA	0.20214	0.205402	NA	0.051	NA	3.46006
1306	1	200960898	200960898	A	T	intronic	KIF21B	NA	NA	NA	intronic	ENSG00000116852	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs12145860	0.25	0.25	0.241	0.257788	0.1541	0.2976	0.196	0.4342	0.1288	0.16	0.32	0.16	0.39	0.2078	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.422658	NA	NA	0.17814	0.403995	NA	0.217	NA	3.45996
1306	4	1737071	1737071	C	A	intronic	TACC3	NA	NA	NA	intronic	ENSG00000013810	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs17681032	0.13	0.13	0.129	0.140575	0.1759	0.0119	0.1254	0.2057	0.1595	0.17	0.01	0.14	0.2	0.1621	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.858774	NA	NA	0.202093	0.207898	NA	0.058	NA	3.459907
1306	1	207139046	207139046	A	G	intronic	FCAMR	NA	NA	NA	intronic	ENSG00000162897	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs11576146	0.21	0.21	0.186	0.189497	0.162	0.3165	0.1513	0.2141	0.0808	0.17	0.29	0.16	0.24	0.1904	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.854523	NA	NA	0.187744	0.182717	NA	0.268	NA	3.459856
1306	3	41795841	41795841	A	C	intronic	ULK4	NA	NA	NA	intronic	ENSG00000168038	NA	NA	NA	NA	NA	3p22.1	NA	NA	NA	NA	rs9867627	0.21	0.21	0.21	0.216653	0.1839	0.1458	0.1484	0.3585	0.18	0.19	0.15	0.15	0.36	0.1864	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.867603	1.867603	NA	0.16988	0.359459	NA	0.246	NA	3.45982
1306	2	167085124	167085124	T	G	intronic	SCN9A	NA	NA	NA	ncRNA_intronic	ENSG00000236107	NA	NA	NA	NA	NA	2q24.3	NA	NA	NA	NA	rs10199799	0.89	0.89	0.9	0.890575	0.8738	0.9563	0.879	0.9175	0.8119	0.86	0.94	0.88	0.89	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.230982	NA	NA	NA	NA	NA	0.833	NA	3.4595333
1306	6	13288535	13288535	C	T	intronic	LOC100130357	NA	NA	NA	ncRNA_intronic	ENSG00000215022	NA	NA	NA	NA	NA	6p24.1	NA	NA	NA	NA	rs202040	0.83	0.83	0.852	0.842652	0.8738	0.6518	0.8833	0.9539	0.8282	0.86	0.64	0.88	0.96	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.622599	NA	NA	NA	NA	NA	0.877	NA	3.4595333
1306	12	125438616	125438616	A	C	intronic	DHX37	NA	NA	NA	intronic	ENSG00000150990	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs11831506	0.26	0.26	0.301	0.261382	0.172	0.1498	0.2046	0.5454	0.1247	0.17	0.15	0.2	0.56	0.1979	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.102889	NA	NA	0.170814	0.506355	NA	0.399	NA	3.459286
1306	17	79817005	79817005	G	A	intronic	P4HB	NA	NA	NA	intronic	ENSG00000185624	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs1010954	0.16	0.16	0.156	0.138978	0.174	0.0883	0.232	0.1528	0.0706	0.18	0.1	0.21	0.15	0.1689	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.37063	NA	NA	0.197891	0.170091	NA	0.174	NA	3.459209
1306	3	126218788	126218788	T	C	intronic	UROC1	NA	NA	NA	intronic	ENSG00000159650	NA	NA	NA	NA	NA	3q21.3	NA	NA	NA	NA	rs6774768	0.53	0.53	0.506	0.53115	0.5408	0.5228	0.4986	0.4743	0.6299	0.55	0.56	0.5	0.47	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.042604	NA	NA	NA	NA	NA	0.565	NA	3.4592
1306	6	31106643	31106643	G	A	intronic	PSORS1C1,PSORS1C2	NA	NA	NA	intronic	ENSG00000204538,ENSG00000204540	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs1265095	0.56	0.56	0.563	0.605032	0.5408	0.4494	0.5663	0.7103	0.7168	0.55	0.47	0.54	0.72	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.080526	NA	NA	NA	NA	NA	0.551	NA	3.4592
1306	6	119522353	119522353	T	C	intronic	MAN1A1	NA	NA	NA	intronic	ENSG00000111885	NA	NA	NA	NA	NA	6q22.31	NA	NA	NA	NA	rs9481890	0.39	0.39	0.358	0.360423	0.5408	0.2034	0.3271	0.3623	0.3579	0.54	0.17	0.39	0.4	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.382918	NA	NA	NA	NA	NA	0.377	NA	3.4592
1306	9	137592961	137592961	T	C	intronic	COL5A1	NA	NA	NA	intronic	ENSG00000130635	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs4341231	0.59	0.59	0.613	0.623802	0.5408	0.7341	0.3862	0.702	0.6585	0.54	0.67	0.41	0.7	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.311851	NA	NA	NA	NA	NA	0.638	NA	3.4592
1306	20	3355567	3355567	T	C	intronic	C20orf194	NA	NA	NA	intronic	ENSG00000088854	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs2208030	0.49	0.49	0.478	0.511981	0.5408	0.4861	0.4957	0.444	0.6125	0.54	0.46	0.49	0.46	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.866192	1.866192	NA	NA	NA	ID=COSN166465;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.514	NA	3.4592
1306	21	15884949	15884949	A	T	intronic	SAMSN1	NA	NA	NA	intronic	ENSG00000155307	NA	NA	NA	NA	NA	21q11.2	NA	NA	NA	NA	rs3761320	0.56	0.56	0.567	0.558906	0.5408	0.6071	0.3847	0.6528	0.5245	0.55	0.61	0.4	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.479603	NA	NA	NA	NA	NA	0.507	NA	3.4592
1306	18	77132755	77132755	T	G	intronic	ATP9B	NA	NA	NA	intronic	ENSG00000166377	NA	NA	NA	NA	NA	18q23	NA	NA	NA	NA	rs2271392	0.29	0.29	0.279	0.28095	0.2634	0.4911	0.2032	0.0681	0.4254	0.27	0.53	0.23	0.08	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.512448	NA	NA	0.277498	0.101879	NA	0.225	NA	3.459102
1306	4	20709411	20709411	C	T	intronic	PACRGL	NA	NA	NA	intronic	ENSG00000163138	NA	NA	NA	NA	NA	4p15.31	NA	NA	NA	NA	rs57364495	0.15	0.15	0.144	0.13758	0.1819	0.0784	0.196	0.1445	0.1022	0.18	0.09	0.18	0.16	0.1733	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.47528	1.47528	NA	0.1859	0.133227	NA	0.138	NA	3.4589
1306	10	134916366	134916366	G	A	intronic	GPR123	NA	NA	NA	intronic	ENSG00000197177	NA	NA	NA	NA	NA	10q26.3	NA	NA	NA	NA	rs12219529	0.3	0.3	0.264	0.300319	0.163	0.4911	0.3127	0.2496	0.3047	0.17	0.51	0.27	0.26	0.2325	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.954937	NA	NA	0.145698	0.250567	NA	0.094	NA	3.458802
1306	13	99127052	99127052	C	T	intronic	STK24	NA	NA	NA	intronic	ENSG00000102572	NA	NA	NA	NA	NA	13q32.2	NA	NA	NA	NA	rs9582232	0.14	0.14	0.157	0.136581	0.1839	0.126	0.1427	0.0961	0.1493	0.19	0.11	0.14	0.1	0.1687	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.39796	NA	NA	0.188721	0.099864	NA	0.08	NA	3.458679
1306	17	78292945	78292945	G	A	intronic	RNF213	NA	NA	NA	intronic	ENSG00000173821	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs6565666	0.2	0.2	0.23	0.211062	0.1879	0.1468	0.1311	0.3419	0.181	0.2	0.13	0.14	0.34	0.1769	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.952796	NA	NA	0.176628	0.333182	NA	0.268	NA	3.458572
1306	6	33656416	33656416	G	A	intronic	ITPR3	NA	NA	NA	intronic	ENSG00000096433	NA	NA	NA	NA	NA	6p21.31	NA	NA	NA	NA	rs2296737	0.12	0.12	0.133	0.10623	0.1909	0.0506	0.1787	0.0628	0.0838	0.19	0.06	0.16	0.06	0.1587	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.339076	NA	NA	0.192093	0.092601	NA	0.123	NA	3.458307
1306	2	83446208	83446208	T	C	intergenic	LOC1720,FUNDC2P2	dist=361315;dist=1071598	NA	NA	ncRNA_exonic	ENSG00000223977	NA	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs7591274	0.56	0.56	0.518	0.523962	0.5417	0.8948	0.5245	0.2352	0.5133	0.54	0.92	0.5	0.23	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.458097	NA	NA	NA	NA	NA	0.594	NA	3.4583
1306	4	9711634	9711634	C	G	intergenic	MIR548I2,DRD5	dist=153697;dist=71624	NA	NA	ncRNA_intronic	ENSG00000251087	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs66534644	0.42	0.42	0.412	0.381589	0.5417	0.373	0.438	0.2345	0.3845	0.56	0.38	0.49	0.2	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.438606	NA	NA	NA	NA	NA	0.304	NA	3.4583
1306	17	39723451	39723451	A	G	intronic	KRT9	NA	NA	NA	intronic	ENSG00000171403	NA	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs6503636	0.65	0.65	0.625	0.665735	0.5417	0.9444	0.7133	0.4728	0.7331	0.54	0.95	0.66	0.48	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.008316	NA	NA	NA	NA	NA	0.638	NA	3.4583
1306	21	10910291	10910291	C	T	intronic	TPTE	NA	NA	NA	intronic	ENSG00000166157	NA	NA	NA	NA	NA	21p11.1	NA	NA	NA	NA	rs150480	0.58	0.58	0.557	NA	NA	NA	NA	NA	NA	0.47	0.54	0.52	0.82	0.5417	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.298663	NA	NA	NA	NA	NA	0.507	NA	3.4583
1306	21	22840930	22840930	A	C	intronic	NCAM2	NA	NA	NA	intronic	ENSG00000154654	NA	NA	NA	NA	NA	21q21.1	NA	NA	NA	NA	rs2250501	0.41	0.41	0.41	0.413339	0.5417	0.0565	0.415	0.6142	0.3763	0.55	0.05	0.44	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.356483	2.356483	NA	NA	NA	NA	0.507	NA	3.4583
1306	2	3627648	3627648	G	C	intronic	RPS7	NA	NA	NA	intronic	ENSG00000171863	NA	NA	NA	NA	NA	2p25.3	NA	NA	Name=4	NA	rs7576238	0.87	0.87	0.878	0.902556	0.7674	0.997	0.8602	0.9289	0.9387	0.77	1	0.84	0.91	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.684766	NA	NA	0.774736	0.917808	NA	0.819	NA	3.457864
1306	1	94473896	94473896	G	T	intronic	ABCA4	NA	NA	NA	intronic	ENSG00000198691	NA	NA	NA	NA	NA	1p22.1	NA	NA	NA	NA	rs2275031	0.19	0.19	0.174	0.178115	0.1839	0.121	0.1758	0.2655	0.1145	0.17	0.16	0.19	0.25	0.1735	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.057289	NA	NA	0.184884	0.232864	ID=COSN163161;OCCURENCE=1(breast)	0.174	NA	3.457716
1306	16	84495770	84495770	G	A	intronic	ATP2C2	NA	NA	NA	ncRNA_exonic	ENSG00000261286	NA	NA	NA	NA	NA	16q24.1	NA	NA	NA	NA	rs2241639	0.27	0.27	0.253	0.247404	0.3241	0.2609	0.2421	0.2632	0.137	0.32	0.22	0.27	0.24	0.2657	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.375624	NA	NA	0.285887	0.263496	NA	0.319	NA	3.4576463
1306	1	168511155	168511155	T	C	intronic	XCL2	NA	NA	NA	intronic	ENSG00000143185	NA	NA	NA	NA	NA	1q24.2	NA	NA	NA	NA	rs76400946	0.61	0.61	0.599	0.661741	0.5427	0.8661	0.6527	0.6059	0.6554	0.5	0.84	0.58	0.53	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.302481	NA	NA	NA	NA	NA	0.594	NA	3.4573
1306	3	37575039	37575039	G	A	intronic	ITGA9	NA	NA	NA	intronic	ENSG00000144668	NA	NA	NA	NA	NA	3p22.2	NA	NA	NA	NA	rs267560	0.61	0.61	0.587	0.559105	0.5427	0.8046	0.6844	0.4486	0.3834	0.54	0.82	0.7	0.42	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.230757	NA	NA	NA	NA	NA	0.63	NA	3.4573
1306	7	99473624	99473624	T	G	downstream	OR2AE1	NA	NA	NA	UTR3	ENSG00000244623	ENST00000316368:c.*61A>C	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs1025576	0.56	0.56	0.583	0.589657	0.5427	0.2927	0.4625	0.9342	0.5685	0.56	0.26	0.51	0.94	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.71693	NA	NA	NA	NA	NA	0.623	NA	3.4573
1306	9	119903506	119903506	C	T	intronic	ASTN2	NA	NA	NA	intronic	ENSG00000148219	NA	NA	NA	NA	NA	9q33.1	NA	NA	NA	NA	rs10817999	0.54	0.54	0.523	0.53135	0.5427	0.6657	0.6499	0.3056	0.6022	0.56	0.65	0.6	0.34	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.172128	NA	NA	NA	NA	NA	0.609	NA	3.4573
1306	14	23816998	23816998	T	C	intronic	SLC22A17	NA	NA	NA	intronic	ENSG00000092096	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs12896494	0.65	0.65	0.654	0.653754	0.5427	0.6667	0.696	0.77	0.5675	0.54	0.71	0.66	0.73	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.300825	NA	NA	NA	NA	NA	0.645	NA	3.4573
1306	14	107057474	107057474	G	T	intergenic	LINC00221,NONE	dist=105945;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000253689	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs6576196	0.57	0.57	0.571	0.614018	0.5427	0.506	0.5317	0.7141	0.7219	0.54	0.49	0.52	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.059684	NA	NA	NA	NA	NA	0.514	NA	3.4573
1306	16	72122765	72122765	G	A	intronic	TXNL4B	NA	NA	NA	intronic	ENSG00000140830	NA	NA	NA	NA	NA	16q22.2	NA	NA	NA	NA	rs12932845	0.55	0.55	0.585	0.590455	0.5427	0.377	0.4164	0.8222	0.6697	0.54	0.39	0.45	0.81	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.172377	NA	NA	NA	NA	NA	0.638	NA	3.4573
1306	19	3749971	3749971	A	G	intronic	TJP3	NA	NA	NA	intronic	ENSG00000105289	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs7257905	0.53	0.53	0.478	0.516773	0.5427	0.6399	0.6556	0.2731	0.5941	0.53	0.68	0.65	0.26	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.872641	NA	NA	NA	NA	NA	0.536	NA	3.4573
1306	22	40800518	40800518	G	A	intronic	SGSM3	NA	NA	NA	intronic	ENSG00000100359	NA	NA	NA	NA	NA	22q13.1	NA	NA	NA	NA	rs760701	0.21	0.21	0.18	0.184105	0.1571	0.2143	0.438	0.1006	0.1135	0.16	0.24	0.38	0.13	0.2162	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.011946	NA	NA	0.169651	0.126872	NA	0.246	NA	3.457049
1306	6	41217395	41217395	G	A	downstream	TREML5P	NA	NA	NA	downstream	ENSG00000225690	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs6917028	0.28	0.28	0.241	0.262181	0.2097	0.4018	0.2262	0.2171	0.2587	0.23	0.42	0.2	0.24	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3978	NA	NA	NA	NA	NA	0.196	NA	3.4569666
1306	15	84611630	84611630	G	A	intronic	ADAMTSL3	NA	NA	NA	intronic	ENSG00000156218	NA	NA	NA	NA	NA	15q25.2	NA	NA	NA	NA	rs12901723	0.11	0.11	0.098	0.0952476	0.1869	0.0337	0.1527	0.0129	0.135	0.19	0.04	0.16	0.02	0.1622	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.017034	NA	NA	0.193953	0.037676	NA	0.065	NA	3.456947
1306	20	47614665	47614665	G	A	intronic	ARFGEF2	NA	NA	NA	intronic	ENSG00000124198	NA	NA	NA	NA	NA	20q13.13	NA	NA	NA	NA	rs3764681	0.3	0.3	0.261	0.289337	0.2753	0.4812	0.3545	0.0711	0.3548	0.27	0.51	0.32	0.11	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.708198	NA	NA	0.267756	0.124277	ID=COSN166561;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.377	NA	3.456944
1306	7	75630183	75630183	C	T	intronic	STYXL1	NA	NA	NA	intronic	ENSG00000127952	NA	NA	NA	NA	NA	7q11.23	NA	NA	NA	NA	rs2302434	0.21	0.21	0.17	0.197484	0.1759	0.2579	0.2248	0.1793	0.1626	0.18	0.28	0.23	0.15	0.1991	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.719793	NA	NA	0.16814	0.172038	NA	0.094	NA	3.45686
1306	16	28615708	28615708	G	A	intergenic	SULT1A2,SULT1A1	dist=7317;dist=1200	NA	NA	intergenic	ENSG00000197165,ENSG00000196502	dist=7278;dist=1195	NA	NA	Score=604;Name=lod=380	NA	16p11.2	NA	NA	NA	NA	rs11074904	0.85	0.85	0.846	0.839257	0.8767	0.996	0.8689	0.6241	0.909	0.89	0.99	0.85	0.63	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.031207	NA	NA	NA	NA	NA	0.819	NA	3.4566334
1306	6	32546866	32546866	T	C	UTR3	HLA-DRB1	NM_002124:c.*2A>G,NM_001243965:c.*2A>G	NA	NA	UTR3	ENSG00000196126	ENST00000360004:c.*2A>G	NA	NA	NA	NA	6p21.32	NA	Name=Pol2-4H8	NA	NA	rs9269693	0.74	0.74	0.688	0.695088	0.6571	0.6944	0.719	0.7693	0.6176	0.71	0.76	0.74	0.76	0.6108	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.266581	NA	NA	0.608934	0.685491	NA	0.478	NA	3.4564994
1306	7	35673799	35673799	T	C	intronic	HERPUD2	NA	NA	NA	intronic	ENSG00000122557	NA	NA	NA	NA	NA	7p14.2	NA	NA	NA	NA	rs2305333	0.64	0.64	0.627	0.652157	0.5437	0.7321	0.598	0.7012	0.6534	0.54	0.74	0.6	0.71	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.528106	NA	NA	NA	NA	NA	0.674	NA	3.4563
1306	9	130149403	130149403	G	A	intronic	GARNL3	NA	NA	NA	intronic	ENSG00000136895	NA	NA	NA	NA	NA	9q33.3	NA	NA	NA	NA	rs4837149	0.45	0.45	0.431	0.477236	0.5437	0.5585	0.3804	0.2716	0.6718	0.55	0.53	0.4	0.26	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.572258	3.572258	NA	NA	NA	NA	0.551	NA	3.4563
1306	12	122999535	122999535	C	T	intronic	RSRC2	NA	NA	NA	intronic	ENSG00000111011	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs6489056	0.45	0.45	0.437	0.444888	0.5437	0.4345	0.4597	0.3048	0.5327	0.56	0.4	0.42	0.34	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.618106	NA	NA	NA	NA	NA	0.449	NA	3.4563
1306	14	50736725	50736725	C	T	intronic	L2HGDH	NA	NA	NA	intronic	ENSG00000087299	NA	NA	NA	NA	NA	14q21.3	NA	NA	NA	NA	rs2153553	0.49	0.49	0.487	0.48722	0.5437	0.6369	0.4697	0.3033	0.5358	0.54	0.63	0.46	0.29	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.209576	NA	NA	NA	NA	NA	0.333	NA	3.4563
1306	17	31351121	31351121	A	G	intronic	ASIC2	NA	NA	NA	intronic	ENSG00000108684	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs16569	0.6	0.6	0.555	0.616414	0.5437	0.5655	0.7334	0.6641	0.5961	0.55	0.55	0.72	0.65	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.689541	NA	NA	NA	NA	NA	0.616	NA	3.4563
1306	19	47037297	47037297	C	T	intronic	PPP5D1	NA	NA	NA	intronic	ENSG00000230510	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs10419176	0.49	0.49	0.479	0.48742	0.5437	0.3006	0.5793	0.528	0.502	0.55	0.36	0.56	0.49	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.305846	NA	NA	NA	NA	NA	0.471	NA	3.4563
1306	19	47037305	47037305	G	A	intronic	PPP5D1	NA	NA	NA	intronic	ENSG00000230510	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs10419555	0.49	0.49	0.478	0.48742	0.5437	0.3006	0.5793	0.528	0.502	0.55	0.36	0.56	0.49	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.02961	NA	NA	NA	NA	NA	0.478	NA	3.4563
1306	19	55019607	55019607	T	C	intronic	LAIR2	NA	NA	NA	intronic	ENSG00000167618	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs2277972	0.63	0.63	0.586	0.629393	0.5437	0.7401	0.5821	0.6831	0.5644	0.52	0.75	0.62	0.65	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.47968	NA	NA	NA	NA	NA	0.58	NA	3.4563
1306	4	77039352	77039352	A	G	intronic	NUP54	NA	NA	NA	intronic	ENSG00000138750	NA	NA	NA	NA	NA	4q21.1	NA	NA	NA	NA	rs13115827	0.22	0.22	0.188	0.191893	0.1779	0.3532	0.1715	0.1218	0.1493	0.18	0.37	0.19	0.12	0.1879	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.297442	1.297442	NA	0.178023	0.140554	NA	0.109	NA	3.456177
1306	1	200960886	200960886	C	T	intronic	KIF21B	NA	NA	NA	intronic	ENSG00000116852	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs12123633	0.26	0.26	0.251	0.264177	0.1541	0.2976	0.2032	0.4531	0.1309	0.16	0.32	0.17	0.41	0.2117	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.861629	NA	NA	0.178256	0.422152	NA	0.217	NA	3.455944
1306	16	89964952	89964952	A	G	intronic	TCF25	NA	NA	NA	intronic	ENSG00000141002	NA	NA	NA	NA	NA	16q24.3	NA	NA	NA	NA	rs72813432	0.13	0.13	0.133	0.132188	0.1859	0.0079	0.1585	0.1324	0.1861	0.19	0.01	0.19	0.14	0.1725	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.297255	NA	NA	0.185814	0.144677	NA	0.145	NA	3.455786
1306	11	51451441	51451441	A	G	intergenic	OR4A5,OR4C46	dist=38993;dist=63841	NA	NA	ncRNA_exonic	ENSG00000227547	NA	NA	NA	NA	NA	11p11.12	NA	NA	NA	NA	rs561951	0.46	0.46	0.423	0.428115	0.5447	0.5387	0.585	0.1899	0.4049	0.54	0.53	0.59	0.15	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.288884	NA	NA	NA	NA	NA	0.333	NA	3.4553
1306	5	1442974	1442974	C	A	intronic	SLC6A3	NA	NA	NA	intronic	ENSG00000142319	NA	NA	NA	NA	NA	5p15.33	NA	NA	NA	NA	rs2254408	0.42	0.42	0.413	0.438898	0.5447	0.1905	0.3689	0.5514	0.4836	0.53	0.16	0.46	0.51	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.261953	NA	NA	NA	NA	NA	0.457	NA	3.4553
1306	7	48273869	48273869	T	C	intronic	ABCA13	NA	NA	NA	intronic	ENSG00000179869	NA	NA	NA	NA	NA	7p12.3	NA	NA	NA	NA	rs7357106	0.45	0.45	0.472	0.426518	0.5447	0.1746	0.4121	0.5666	0.3855	0.54	0.19	0.42	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.408673	NA	NA	NA	NA	NA	0.42	NA	3.4553
1306	7	130007598	130007598	A	G	intronic	CPA5	NA	NA	NA	intronic	ENSG00000158525	NA	NA	NA	NA	NA	7q32.2	NA	NA	NA	NA	rs748812	0.56	0.56	0.553	0.571885	0.5447	0.4444	0.6239	0.767	0.4305	0.55	0.44	0.59	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.834705	NA	NA	NA	NA	NA	0.529	NA	3.4553
1306	7	130007913	130007913	T	G	intronic	CPA5	NA	NA	NA	intronic	ENSG00000158525	NA	NA	NA	NA	NA	7q32.2	NA	NA	NA	NA	rs2241273	0.56	0.56	0.533	0.569089	0.5447	0.4435	0.6196	0.761	0.4284	0.55	0.44	0.58	0.7	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.928557	NA	NA	NA	NA	NA	0.529	NA	3.4553
1306	12	110002819	110002819	A	G	intronic	MMAB	NA	NA	NA	intronic	ENSG00000139428	NA	NA	NA	NA	NA	12q24.11	NA	NA	NA	NA	rs10850380	0.52	0.52	0.537	0.518371	0.5447	0.3125	0.4928	0.7723	0.3783	0.56	0.29	0.51	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.431241	NA	NA	NA	NA	NA	0.565	NA	3.4553
1306	14	31922408	31922408	G	A	intronic	DTD2	NA	NA	NA	intronic	ENSG00000129480,ENSG00000203546	NA	NA	NA	NA	NA	14q12	NA	NA	NA	NA	rs34278949	0.46	0.46	0.425	0.475839	0.5447	0.4107	0.5331	0.4213	0.5051	0.52	0.38	0.47	0.44	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.685106	NA	NA	NA	NA	NA	0.507	NA	3.4553
1307	22	40800544	40800544	C	T	intronic	SGSM3	NA	NA	NA	intronic	ENSG00000100359	NA	NA	NA	NA	NA	22q13.1	NA	NA	NA	NA	rs2235318	0.21	0.21	0.176	0.183706	0.1581	0.2143	0.438	0.0976	0.1145	0.16	0.24	0.38	0.13	0.2174	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.315395	NA	NA	0.169535	0.126872	NA	0.246	NA	3.454965
1307	1	226026241	226026241	C	G	intronic	EPHX1	NA	NA	NA	intronic	ENSG00000143819	NA	NA	NA	NA	NA	1q42.12	NA	NA	NA	NA	rs4149223	0.53	0.53	0.454	0.497204	0.5457	0.5685	0.6254	0.3472	0.4857	0.56	0.57	0.62	0.36	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.134597	NA	NA	NA	NA	NA	0.58	NA	3.4543
1307	3	97957349	97957349	G	A	intergenic	OR5H15,OR5H6	dist=68864;dist=25780	NA	NA	ncRNA_exonic	ENSG00000187900	NA	NA	NA	NA	NA	3q11.2	NA	NA	NA	NA	rs6439722	0.58	0.58	0.577	0.573482	0.5457	0.4931	0.5	0.705	0.5593	0.54	0.56	0.48	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.339169	NA	0.01	NA	NA	NA	0.522	NA	3.4543
1307	10	99778226	99778226	A	G	intronic	CRTAC1	NA	NA	NA	intronic	ENSG00000095713	NA	NA	NA	NA	NA	10q24.2	NA	NA	NA	NA	rs2439823	0.47	0.47	0.503	0.470048	0.5457	0.2292	0.3617	0.7057	0.3988	0.54	0.24	0.42	0.68	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.438684	NA	NA	NA	NA	NA	0.529	NA	3.4543
1307	10	117849106	117849106	G	A	intronic	GFRA1	NA	NA	NA	intronic	ENSG00000151892	NA	NA	NA	NA	NA	10q25.3	NA	NA	NA	NA	rs56346845	0.27	0.27	0.259	0.260383	0.5457	0.1111	0.2925	0.0303	0.409	0.54	0.09	0.31	0.04	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.949778	NA	NA	NA	NA	NA	0.203	NA	3.4543
1307	10	117849113	117849113	T	C	intronic	GFRA1	NA	NA	NA	intronic	ENSG00000151892	NA	NA	NA	NA	NA	10q25.3	NA	NA	NA	NA	rs56384669	0.27	0.27	0.263	0.26278	0.5457	0.1141	0.2954	0.0348	0.41	0.54	0.1	0.31	0.04	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.798947	NA	NA	NA	NA	NA	0.203	NA	3.4543
1307	10	124036226	124036226	T	C	intronic	BTBD16	NA	NA	NA	intronic	ENSG00000138152	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs7086403	0.73	0.73	0.752	0.735024	0.5457	0.8869	0.7075	0.8691	0.6115	0.56	0.9	0.67	0.86	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.691201	NA	NA	NA	NA	NA	0.674	NA	3.4543
1307	11	51426513	51426513	C	T	intergenic	OR4A5,OR4C46	dist=14065;dist=88769	NA	NA	ncRNA_exonic	ENSG00000255349	NA	NA	NA	NA	NA	11p11.12	NA	NA	NA	NA	rs510697	0.47	0.47	0.453	0.431709	0.5457	0.5407	0.5821	0.2027	0.4049	0.56	0.53	0.59	0.16	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.53402	NA	NA	NA	NA	NA	0.355	NA	3.4543
1307	11	51451575	51451575	G	A	intergenic	OR4A5,OR4C46	dist=39127;dist=63707	NA	NA	ncRNA_exonic	ENSG00000227547	NA	NA	NA	NA	NA	11p11.12	NA	NA	NA	NA	rs542985	0.44	0.44	0.401	0.43151	0.5457	0.5357	0.5807	0.2065	0.4049	0.53	0.5	0.54	0.16	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.172715	NA	NA	NA	NA	NA	0.304	NA	3.4543
1307	16	72157000	72157000	C	G	intronic	PMFBP1	NA	NA	NA	intronic	ENSG00000118557	NA	NA	NA	NA	NA	16q22.2	NA	NA	NA	NA	rs12935266	0.64	0.64	0.646	0.66853	0.5457	0.63	0.6268	0.8064	0.6779	0.54	0.66	0.6	0.78	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.159672	NA	NA	NA	NA	NA	0.681	NA	3.4543
1307	17	29849479	29849479	C	T	intronic	RAB11FIP4	NA	NA	NA	intronic	ENSG00000131242	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs60594701	0.23	0.23	0.199	0.202676	0.2734	0.12	0.2622	0.236	0.1278	0.27	0.13	0.32	0.23	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.200213	NA	NA	0.27247	0.222543	NA	0.167	NA	3.45413
1307	6	74135016	74135016	C	T	exonic	MB21D1	NA	synonymous SNV	MB21D1:NM_138441:exon5:c.G1503A:p.K501K	exonic	ENSG00000164430	NA	synonymous SNV	ENSG00000164430:ENST00000370315:exon5:c.G1503A:p.K501K	NA	NA	6q13	NA	NA	NA	NA	rs311678	0.71	0.71	0.709	0.718051	0.7475	0.7262	0.6138	0.6679	0.8211	0.75	0.72	0.64	0.68	0.7216	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.253866	NA	NA	0.743605	0.672946	NA	0.819	NA	3.4539616
1307	17	40720632	40720632	G	A	intronic	MLX	NA	NA	NA	intronic	ENSG00000108788	NA	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs646123	0.29	0.29	0.291	0.319289	0.2654	0.4355	0.196	0.1929	0.5133	0.28	0.42	0.19	0.22	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.235052	2.235052	NA	0.280955	0.206647	NA	0.399	NA	3.453645
1307	1	179304892	179304892	T	C	intronic	SOAT1	NA	NA	NA	intronic	ENSG00000057252	NA	NA	NA	NA	NA	1q25.2	NA	NA	NA	NA	rs1034269	0.6	0.6	0.579	0.586661	0.5467	0.8423	0.7017	0.3502	0.6022	0.53	0.85	0.65	0.39	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.094275	NA	NA	NA	NA	NA	0.536	NA	3.4533
1307	1	205312280	205312280	C	G	intronic	KLHDC8A	NA	NA	NA	intronic	ENSG00000162873	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs7549293	0.6	0.6	0.609	0.624002	0.5467	0.6448	0.562	0.6369	0.7086	0.56	0.67	0.54	0.61	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.061873	NA	NA	NA	NA	NA	0.638	NA	3.4533
1307	2	60962303	60962303	T	C	intergenic	BCL11A,PAPOLG	dist=181670;dist=21062	NA	NA	ncRNA_exonic	ENSG00000271707	NA	NA	NA	NA	NA	2p16.1	NA	NA	NA	NA	rs3796067	0.39	0.39	0.385	0.354034	0.5467	0.1448	0.3977	0.3835	0.3006	0.53	0.15	0.47	0.39	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.366741	2.366741	NA	NA	NA	NA	0.471	NA	3.4533
1307	2	60962589	60962589	T	C	intergenic	BCL11A,PAPOLG	dist=181956;dist=20776	NA	NA	ncRNA_exonic	ENSG00000271707	NA	NA	NA	NA	NA	2p16.1	NA	NA	NA	NA	rs11692811	0.39	0.39	0.382	0.350639	0.5467	0.1448	0.3977	0.3707	0.3006	0.53	0.15	0.47	0.37	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.145883	NA	NA	NA	NA	NA	0.449	NA	3.4533
1307	2	230231889	230231889	A	T	intronic	DNER	NA	NA	NA	intronic	ENSG00000187957	NA	NA	NA	NA	NA	2q36.3	NA	NA	NA	NA	rs2302769	0.54	0.54	0.549	0.546126	0.5467	0.4008	0.5245	0.7746	0.4018	0.53	0.39	0.53	0.75	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.048032	NA	NA	NA	NA	NA	0.58	NA	3.4533
1307	3	97916064	97916064	A	G	intergenic	OR5H15,OR5H6	dist=27579;dist=67065	NA	NA	ncRNA_exonic	ENSG00000249321	NA	NA	NA	NA	NA	3q11.2	NA	NA	NA	NA	rs11706390	0.59	0.59	0.591	0.601837	0.5467	0.494	0.5072	0.8086	0.5573	0.54	0.55	0.46	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.311351	NA	NA	NA	NA	NA	0.536	NA	3.4533
1307	3	97916375	97916375	A	G	intergenic	OR5H15,OR5H6	dist=27890;dist=66754	NA	NA	ncRNA_exonic	ENSG00000249321	NA	NA	NA	NA	NA	3q11.2	NA	NA	NA	NA	rs6765598	0.58	0.58	0.595	0.591054	0.5467	0.494	0.5029	0.77	0.5573	0.55	0.56	0.48	0.75	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.874761	NA	NA	NA	NA	NA	0.486	NA	3.4533
1307	3	97926354	97926354	A	G	intergenic	OR5H15,OR5H6	dist=37869;dist=56775	NA	NA	ncRNA_exonic	ENSG00000249975	NA	NA	NA	NA	NA	3q11.2	NA	NA	NA	NA	rs9837299	NA	NA	0.564	0.618011	0.5467	0.495	0.5173	0.8623	0.5593	NA	NA	NA	NA	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.407206	NA	NA	NA	NA	NA	0.543	NA	3.4533
1307	3	156249407	156249407	G	C	intronic	KCNAB1	NA	NA	NA	intronic	ENSG00000169282	NA	NA	NA	NA	NA	3q25.31	NA	NA	NA	NA	rs2280030	0.57	0.57	0.54	0.539137	0.5467	0.5982	0.6023	0.503	0.4744	0.55	0.64	0.6	0.48	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.415597	NA	NA	NA	NA	NA	0.543	NA	3.4533
1307	9	90320954	90320954	G	A	intronic	DAPK1	NA	NA	NA	intronic	ENSG00000196730	NA	NA	NA	NA	NA	9q21.33	NA	NA	NA	NA	rs1927973	0.61	0.61	0.608	0.617612	0.5467	0.5446	0.6254	0.7504	0.5808	0.55	0.54	0.64	0.75	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.850284	NA	NA	NA	NA	NA	0.652	NA	3.4533
1307	10	106907320	106907320	A	G	intronic	SORCS3	NA	NA	NA	intronic	ENSG00000156395	NA	NA	NA	NA	NA	10q25.1	NA	NA	NA	NA	rs791124	0.49	0.49	0.476	0.489018	0.5467	0.3492	0.6268	0.4803	0.4877	0.54	0.32	0.64	0.52	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.705977	NA	NA	NA	NA	NA	0.355	NA	3.4533
1307	16	2110571	2110571	C	G	intronic	TSC2	NA	NA	NA	intronic	ENSG00000103197	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs2074968	0.54	0.54	0.533	0.557508	0.5467	0.7143	0.4986	0.3979	0.6646	0.55	0.72	0.47	0.36	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.67981	NA	NA	NA	NA	NA	0.514	NA	3.4533
1307	17	80352138	80352138	T	C	intronic	OGFOD3	NA	NA	NA	intronic	ENSG00000181396	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs6502106	0.5	0.5	0.415	0.555711	0.5467	0.3631	0.6585	0.5272	0.729	0.55	0.35	0.62	0.53	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.760778	NA	NA	NA	NA	NA	0.507	NA	3.4533
1307	21	42813011	42813011	G	A	intronic	MX1	NA	NA	NA	intronic	ENSG00000157601	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs1788352	0.35	0.35	0.165	0.341254	0.5467	0.1052	0.4236	0.3094	0.3579	0.54	0.08	0.44	0.3	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.410993	NA	NA	NA	NA	NA	0.094	NA	3.4533
1307	19	37726433	37726433	G	A	intronic	ZNF383	NA	NA	NA	intronic	ENSG00000188283	NA	NA	NA	NA	NA	19q13.12	NA	NA	NA	NA	rs320880	0.21	0.21	0.195	0.235024	0.1839	0.2321	0.1484	0.2648	0.3119	0.18	0.26	0.16	0.23	0.1935	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.826379	NA	NA	0.169302	0.241035	NA	0.304	NA	3.453298
1307	11	102565856	102565856	A	T	intronic	MMP27	NA	NA	NA	intronic	ENSG00000137675	NA	NA	NA	NA	NA	11q22.2	NA	NA	NA	NA	rs10895351	0.12	0.12	0.12	0.109425	0.1819	0.1071	0.1873	0.0083	0.1186	0.2	0.11	0.15	0.01	0.1693	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.504967	NA	NA	0.195511	0.038357	NA	0.029	NA	3.453289
1307	19	58989424	58989424	C	T	intronic	ZNF446	NA	NA	NA	intronic	ENSG00000083838	NA	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs731259	0.13	0.13	0.141	0.131789	0.2117	0.0556	0.1614	0.087	0.1677	0.2	0.06	0.17	0.1	0.1621	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.064199	NA	NA	0.173023	0.097367	NA	0.145	NA	3.453177
1307	1	248084222	248084222	T	C	upstream	OR2T8	NA	NA	NA	upstream	ENSG00000177462	NA	NA	NA	NA	NA	1q44	NA	NA	NA	NA	rs12048237	0.4	0.4	0.422	0.439696	0.2137	0.5526	0.2925	0.559	0.499	0.22	0.57	0.29	0.54	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.317604	1.317604	NA	NA	NA	NA	0.377	NA	3.4529666
1307	7	44113656	44113656	T	C	intronic	POLM	NA	NA	NA	UTR3	ENSG00000122678	ENST00000458246:c.*799A>G	NA	NA	NA	NA	7p13	NA	NA	NA	NA	rs3218661	0.25	0.25	0.211	0.262181	0.2336	0.1141	0.2767	0.4327	0.2035	0.24	0.12	0.29	0.4	0.254	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.25012	NA	NA	0.226163	0.408761	NA	0.21	NA	3.4529037
1307	20	25257260	25257260	G	C	intronic	PYGB	NA	NA	NA	intronic	ENSG00000100994	NA	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	rs2257370	0.2	0.2	0.184	0.17492	0.1879	0.3552	0.1398	0.0658	0.1483	0.19	0.35	0.17	0.08	0.1738	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.25841	NA	NA	0.185741	0.086246	NA	0.094	NA	3.452559
1307	2	60962423	60962423	T	C	intergenic	BCL11A,PAPOLG	dist=181790;dist=20942	NA	NA	ncRNA_exonic	ENSG00000271707	NA	NA	NA	NA	NA	2p16.1	NA	NA	NA	NA	rs12713426	0.39	0.39	0.385	0.354233	0.5477	0.1448	0.3977	0.3835	0.3006	0.53	0.15	0.47	0.39	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.061414	NA	NA	NA	NA	NA	0.464	NA	3.4523
1307	3	97916391	97916391	A	C	intergenic	OR5H15,OR5H6	dist=27906;dist=66738	NA	NA	ncRNA_exonic	ENSG00000249321	NA	NA	NA	NA	NA	3q11.2	NA	NA	NA	NA	rs6765605	0.59	0.59	0.581	0.592652	0.5477	0.494	0.5058	0.7738	0.5573	0.55	0.56	0.48	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.91605	NA	NA	NA	NA	NA	0.486	NA	3.4523
1307	6	29149561	29149561	G	A	intergenic	OR2J2,OR14J1	dist=7210;dist=124906	NA	NA	ncRNA_exonic	ENSG00000224233	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs3116817	0.4	0.4	0.366	0.378195	0.5477	0.378	0.451	0.112	0.5123	0.58	0.37	0.46	0.12	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.277551	NA	NA	NA	NA	NA	0.341	NA	3.4523
1307	6	29149632	29149632	T	G	intergenic	OR2J2,OR14J1	dist=7281;dist=124835	NA	NA	ncRNA_exonic	ENSG00000224233	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs3129168	NA	NA	0.321	0.378195	0.5477	0.378	0.451	0.112	0.5123	NA	NA	NA	NA	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.408479	NA	NA	NA	NA	NA	0.333	NA	3.4523
1307	6	29149645	29149645	C	T	intergenic	OR2J2,OR14J1	dist=7294;dist=124822	NA	NA	ncRNA_exonic	ENSG00000224233	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs3116819	0.37	0.37	0.283	0.378195	0.5477	0.378	0.451	0.112	0.5123	0.54	0.33	0.44	0.09	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.815806	NA	NA	NA	NA	NA	0.341	NA	3.4523
1307	9	33649383	33649383	C	A	intergenic	ANXA2P2,PTENP1	dist=23851;dist=24119	NA	NA	ncRNA_exonic	ENSG00000215206	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs855547	0.43	0.43	0.46	0.488019	0.5477	0.3433	0.4236	0.5961	0.4755	0.48	0.27	0.4	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.123623	NA	1	NA	NA	ID=COSN168514;OCCURENCE=1(large_intestine)	0.594	NA	3.4523
1307	9	139092679	139092679	T	C	intronic	LHX3	NA	NA	NA	intronic	ENSG00000107187	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs4842131	0.5	0.5	0.505	0.512181	0.5477	0.3938	0.4294	0.6036	0.5327	0.54	0.42	0.45	0.55	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.575697	NA	NA	NA	NA	NA	0.42	NA	3.4523
1307	11	5573160	5573160	G	C	intergenic	OR52H1,OR52B6	dist=6407;dist=28947	NA	NA	ncRNA_exonic	ENSG00000248553	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs401835	0.7	0.7	0.697	0.726837	0.5477	0.9147	0.6988	0.6944	0.7812	0.55	0.91	0.66	0.72	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.115072	NA	NA	NA	NA	NA	0.667	NA	3.4523
1307	15	99492045	99492045	G	A	intronic	IGF1R	NA	NA	NA	intronic	ENSG00000140443	NA	NA	NA	NA	NA	15q26.3	NA	NA	NA	NA	rs2684789	0.59	0.59	0.584	0.604433	0.5477	0.6627	0.5692	0.5212	0.7403	0.56	0.68	0.59	0.55	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.048805	NA	NA	NA	NA	NA	0.645	NA	3.4523
1307	5	98236831	98236831	T	C	intronic	CHD1	NA	NA	NA	intronic	ENSG00000153922	NA	NA	NA	NA	NA	5q21.1	NA	NA	NA	NA	rs7702352	0.18	0.18	0.166	0.179912	0.1789	0.1954	0.1772	0.1339	0.229	0.18	0.2	0.22	0.14	0.1864	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.344533	NA	NA	0.182442	0.144349	NA	0.188	NA	3.452258
1307	5	132228133	132228133	A	G	intronic	AFF4	NA	NA	NA	intronic	ENSG00000072364	NA	NA	NA	NA	NA	5q31.1	NA	NA	NA	NA	rs11739417	0.19	0.19	0.185	0.171925	0.1759	0.1429	0.1398	0.2882	0.0634	0.17	0.14	0.17	0.29	0.1684	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.790414	NA	NA	0.203536	0.283833	NA	0.217	NA	3.452164
1307	15	28356859	28356859	C	T	UTR3	HERC2	NM_004667:c.*50G>A	NA	NA	UTR3	ENSG00000128731	ENST00000261609:c.*50G>A	NA	NA	NA	Name=Vitiligo	15q13.1	NA	NA	NA	NA	rs1129038	0.29	0.29	0.277	0.176917	0.6352	0.001	0.2032	0.028	0.0695	0.71	0.0017	0.22	0.04	0.5073	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.657638	NA	NA	0.738837	0.141625	NA	0.312	NA	3.4519964
1307	1	200958111	200958111	A	C	intronic	KIF21B	NA	NA	NA	intronic	ENSG00000116852	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs12143520	0.26	0.26	0.257	0.263978	0.1541	0.2986	0.2032	0.4531	0.1288	0.16	0.32	0.17	0.41	0.2139	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.008773	NA	NA	0.180165	0.422381	NA	0.232	NA	3.451835
1307	17	8064779	8064779	C	G	intronic	VAMP2	NA	NA	NA	UTR3	ENSG00000220205	ENST00000404970:c.*4G>C,ENST00000481878:c.*4G>C	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs75664430	0.15	0.15	0.152	0.140974	0.2475	0.0317	0.1499	0.1415	0.137	0.25	0.03	0.18	0.12	0.201	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.542091	NA	NA	0.266512	0.162733	NA	0.123	NA	3.4516547
1307	2	202571562	202571562	C	T	intronic	ALS2	NA	NA	NA	intronic	ENSG00000003393	NA	NA	NA	NA	NA	2q33.1	NA	NA	NA	NA	rs3219169	0.24	0.24	0.236	0.265375	0.1879	0.3869	0.1153	0.2035	0.41	0.21	0.38	0.09	0.22	0.2091	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.48943	NA	NA	0.151356	0.187974	NA	0.21	NA	3.451644
1307	12	116420448	116420448	T	C	intronic	MED13L	NA	NA	NA	intronic	ENSG00000123066	NA	NA	NA	NA	NA	12q24.21	NA	NA	NA	NA	rs56159580	0.14	0.14	0.133	0.148962	0.1879	0.1746	0.1268	0.0522	0.229	0.17	0.17	0.14	0.09	0.1831	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.88698	NA	NA	0.177674	0.074671	NA	0.145	NA	3.451326
1307	2	60962118	60962118	T	C	intergenic	BCL11A,PAPOLG	dist=181485;dist=21247	NA	NA	ncRNA_exonic	ENSG00000271707	NA	NA	NA	NA	NA	2p16.1	NA	NA	NA	NA	rs3796068	0.39	0.39	0.379	0.355032	0.5487	0.1448	0.3977	0.3858	0.3006	0.53	0.15	0.47	0.39	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.489448	NA	NA	NA	NA	NA	0.471	NA	3.4513
1307	5	169361	169361	C	T	intronic	PLEKHG4B	NA	NA	NA	intronic	ENSG00000153404	NA	NA	NA	NA	NA	5p15.33	NA	NA	NA	NA	rs13159868	0.38	0.38	0.374	0.398962	0.5487	0.2798	0.4265	0.233	0.5726	0.54	0.28	0.44	0.22	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.935803	NA	NA	NA	NA	NA	0.471	NA	3.4513
1307	5	179991841	179991841	A	G	intronic	CNOT6	NA	NA	NA	intronic	ENSG00000113300	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs6874985	0.39	0.39	0.388	0.367412	0.5487	0.2163	0.3963	0.2912	0.4192	0.54	0.21	0.44	0.33	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.196777	NA	NA	NA	NA	NA	0.428	NA	3.4513
1307	7	78256342	78256342	C	T	intronic	MAGI2	NA	NA	NA	intronic	ENSG00000187391	NA	NA	NA	NA	NA	7q21.11	NA	NA	NA	NA	rs38116	0.42	0.42	0.419	0.439097	0.5487	0.2331	0.5144	0.3336	0.6278	0.55	0.23	0.53	0.34	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.825033	NA	NA	NA	NA	NA	0.457	NA	3.4513
1307	19	55207769	55207769	T	C	intergenic	LILRB4,LILRP2	dist=27923;dist=11832	NA	NA	upstream	ENSG00000186152	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs114126601	0.03	0.03	0.022	0.0279553	0.0487	0.001	0.0533	0.0363	0.0051	0.05	NA	0.06	0.04	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.084211	NA	NA	NA	NA	NA	0.022	NA	3.4513
1307	1	54375570	54375570	C	A	intronic	DIO1	NA	NA	NA	intronic	ENSG00000211452	NA	NA	NA	NA	Name=Thyroid hormone levels,Multiple myeloma (hyperdiploidy)	1p32.3	NA	NA	NA	NA	rs2235544	0.45	0.45	0.39	0.460264	0.5249	0.4613	0.6412	0.1626	0.6667	0.53	0.45	0.62	0.18	0.5206	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.67419	NA	NA	0.503372	0.263277	NA	0.464	NA	3.451128
1307	12	113724945	113724945	A	G	intronic	TPCN1	NA	NA	NA	intronic	ENSG00000186815	NA	NA	NA	NA	NA	12q24.13	NA	NA	NA	NA	rs2241544	0.22	0.22	0.208	0.214058	0.1899	0.2282	0.134	0.2958	0.1708	0.19	0.26	0.15	0.26	0.1864	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.357301	NA	NA	0.172791	0.264412	NA	0.319	NA	3.450909
1307	20	36624756	36624756	C	A	intronic	TTI1	NA	NA	NA	intronic	ENSG00000101407	NA	NA	NA	NA	NA	20q11.23	NA	NA	NA	NA	rs2273349	0.15	0.15	0.133	0.17492	0.1938	0.2163	0.1009	0.0764	0.2986	0.2	0.17	0.11	0.09	0.1736	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.737659	NA	NA	0.181744	0.093055	NA	0.065	NA	3.450856
1307	19	15791132	15791132	T	A	intronic	CYP4F12	NA	NA	NA	intronic	ENSG00000186204	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs2074568	0.18	0.18	0.167	0.192093	0.165	0.1329	0.1729	0.2292	0.2444	0.17	0.15	0.15	0.23	0.2003	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.355591	NA	0	0.184039	0.22	NA	0.196	NA	3.450661
1307	2	217123958	217123958	T	C	UTR3	MARCH4	NM_020814:c.*77A>G	NA	NA	UTR3	ENSG00000144583	ENST00000273067:c.*77A>G	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs169616	0.75	0.75	0.759	0.775958	0.8827	0.5159	0.7089	0.8691	0.8558	0.89	0.51	0.72	0.86	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.356059	NA	NA	NA	NA	NA	0.826	NA	3.4506334
1307	15	50731390	50731390	C	T	intronic	USP8	NA	NA	NA	intronic	ENSG00000138592	NA	NA	NA	NA	NA	15q21.2	NA	NA	NA	NA	rs11632708	0.12	0.12	0.104	0.133586	0.1839	0.002	0.2507	0.0847	0.2004	0.17	NA	0.25	0.09	0.1839	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.178971	3.178971	NA	0.181882	0.098588	NA	0.145	NA	3.450318
1307	2	141571440	141571440	C	G	intronic	LRP1B	NA	NA	NA	intronic	ENSG00000168702	NA	NA	NA	NA	NA	2q22.1	NA	NA	NA	NA	rs17575847	0.47	0.47	0.466	0.431709	0.5497	0.6577	0.4092	0.1589	0.4622	0.55	0.66	0.43	0.17	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.380887	NA	NA	NA	NA	NA	0.42	NA	3.4503
1307	7	130147307	130147307	T	G	intronic	COPG2	NA	NA	NA	intronic	ENSG00000158623	NA	NA	NA	NA	NA	7q32.2	NA	NA	NA	NA	rs2302826	0.49	0.49	0.437	0.448682	0.5497	0.6121	0.536	0.1573	0.5082	0.54	0.63	0.53	0.21	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.753122	NA	NA	NA	NA	NA	0.449	NA	3.4503
1307	8	73993200	73993200	T	G	intronic	SBSPON	NA	NA	NA	intronic	ENSG00000164764	NA	NA	NA	NA	NA	8q21.11	NA	NA	NA	NA	rs10087744	0.46	0.46	0.462	0.446086	0.5497	0.2034	0.585	0.5605	0.3364	0.53	0.21	0.56	0.57	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.207859	NA	NA	NA	NA	NA	0.457	NA	3.4503
1307	9	139089717	139089717	T	G	intronic	LHX3	NA	NA	NA	intronic	ENSG00000107187	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs7850466	0.45	0.45	0.465	0.48123	0.5497	0.3333	0.4092	0.5976	0.4571	0.51	0.33	0.41	0.5	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.522932	NA	NA	NA	NA	NA	NA	NA	3.4503
1307	9	139089718	139089718	A	C	intronic	LHX3	NA	NA	NA	intronic	ENSG00000107187	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs7847312	0.44	0.44	0.45	0.48143	0.5497	0.3333	0.4107	0.5976	0.4571	0.51	0.33	0.4	0.5	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.498429	NA	NA	NA	NA	NA	NA	NA	3.4503
1307	14	93303854	93303854	T	C	intronic	GOLGA5	NA	NA	NA	intronic	ENSG00000066455	NA	NA	NA	NA	NA	14q32.12	NA	NA	NA	NA	rs74598769	NA	NA	NA	0.655551	0.5497	0.6706	0.634	0.68	0.7311	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.488364	NA	NA	NA	NA	NA	NA	NA	3.4503
1307	17	18541868	18541868	A	G	intronic	TBC1D28	NA	NA	NA	intronic	ENSG00000189375	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs55807264	0.71	0.71	0.574	0.709864	0.5497	0.9583	0.6455	0.7103	0.6636	0.54	0.96	0.65	0.7	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.647854	NA	NA	NA	NA	NA	0.529	NA	3.4503
1307	18	28908090	28908090	G	A	intronic	DSG1	NA	NA	NA	intronic	ENSG00000134760	NA	NA	NA	NA	NA	18q12.1	NA	NA	NA	NA	rs2303465	0.38	0.38	0.37	0.410743	0.5497	0.1012	0.3516	0.4062	0.635	0.55	0.1	0.41	0.4	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.950857	NA	NA	NA	NA	NA	0.464	NA	3.4503
1307	19	2138507	2138507	A	G	intronic	AP3D1	NA	NA	NA	intronic	ENSG00000065000	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs12460763	0.53	0.53	0.536	0.473642	0.5497	0.4722	0.4452	0.4985	0.3834	0.55	0.53	0.46	0.53	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.227443	NA	NA	NA	NA	NA	0.464	NA	3.4503
1307	20	47839653	47839653	C	T	intronic	DDX27	NA	NA	NA	intronic	ENSG00000124228	NA	NA	NA	NA	NA	20q13.13	NA	NA	NA	NA	rs2273146	0.42	0.42	0.377	0.385982	0.5497	0.4127	0.428	0.1815	0.4366	0.54	0.39	0.46	0.25	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.891405	NA	NA	NA	NA	NA	0.384	NA	3.4503
1307	6	70979324	70979324	A	G	intronic	COL9A1	NA	NA	NA	intronic	ENSG00000112280	NA	NA	NA	NA	NA	6q13	NA	NA	NA	NA	rs6935778	0.12	0.12	0.11	0.0898562	0.1978	0.002	0.1066	0.0938	0.0521	0.21	0.0017	0.12	0.11	0.1524	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.728011	3.728011	NA	0.199581	0.098774	NA	0.203	NA	3.450219
1307	11	132177563	132177563	C	T	intronic	NTM	NA	NA	NA	intronic	ENSG00000182667	NA	NA	NA	NA	NA	11q25	NA	NA	NA	NA	rs2305272	0.2	0.2	0.184	0.192093	0.1839	0.37	0.2651	0.034	0.1789	0.19	0.31	0.24	0.04	0.1831	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.084473	NA	NA	0.182802	0.064289	NA	0.196	NA	3.450198
1307	1	1900332	1900332	A	G	intronic	KIAA1751	NA	NA	NA	intergenic	ENSG00000142609,ENSG00000142609	dist=2367;dist=19069	NA	NA	NA	NA	1p36.33	NA	NA	NA	NA	rs55709963	0.21	0.21	0.166	0.174521	0.2167	0.2728	0.1744	0.1293	0.091	0.21	0.3	0.19	0.12	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000339	NA	NA	NA	NA	NA	0.203	NA	3.4499667
1307	10	13782605	13782605	G	A	intronic	FRMD4A	NA	NA	NA	ncRNA_intronic	ENSG00000234091	NA	NA	NA	NA	NA	10p13	NA	NA	Name=11	NA	rs6602679	0.75	0.75	0.753	0.771965	0.6133	0.9573	0.7118	0.7852	0.7689	0.61	0.96	0.68	0.77	0.6745	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.017333	NA	NA	0.595698	0.757149	NA	0.616	NA	3.4498353
1307	3	42788914	42788914	G	C	intronic	CCDC13	NA	NA	NA	intronic	ENSG00000244607	NA	NA	NA	NA	NA	3p22.1	NA	NA	NA	NA	rs12490743	0.17	0.17	0.179	0.170128	0.1859	0.1081	0.1729	0.1422	0.2536	0.19	0.12	0.19	0.17	0.1831	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.290938	NA	NA	0.181279	0.149342	NA	0.167	NA	3.449721
1307	5	42800808	42800808	C	T	UTR3	CCDC152,SEPP1	NM_001134848:c.*925C>T;NM_001085486:c.*14G>A,NM_001093726:c.*14G>A,NM_005410:c.*14G>A	NA	NA	UTR3	ENSG00000198865,ENSG00000250722	ENST00000361970:c.*925C>T;ENST00000514985:c.*14G>A,ENST00000511224:c.*14G>A,ENST00000506577:c.*14G>A	NA	NA	NA	NA	5p12	NA	NA	NA	NA	rs7579	0.27	0.27	0.255	0.243011	0.2903	0.2728	0.3862	0.1248	0.2219	0.3	0.28	0.36	0.14	0.3061	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.970753	NA	NA	0.28739	0.144651	NA	0.225	NA	3.4495434
1307	3	184020905	184020905	A	G	intronic	PSMD2	NA	NA	NA	intronic	ENSG00000145191,ENSG00000175166	NA	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs2272473	0.42	0.42	0.425	0.416933	0.2724	0.376	0.5101	0.6407	0.2393	0.27	0.43	0.45	0.63	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.179006	NA	NA	0.278127	0.581647	NA	0.471	NA	3.449473
1307	8	129021262	129021262	C	T	ncRNA_intronic	PVT1	NA	NA	NA	ncRNA_intronic	ENSG00000249859	NA	NA	NA	NA	NA	8q24.21	NA	NA	NA	NA	rs2392823	0.72	0.72	0.725	0.688299	0.6233	0.6944	0.7248	0.8238	0.5399	0.63	0.73	0.71	0.83	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.02814	NA	NA	0.593966	0.771676	NA	0.623	NA	3.4494006
1307	3	97957115	97957115	T	C	intergenic	OR5H15,OR5H6	dist=68630;dist=26014	NA	NA	ncRNA_intronic	ENSG00000251088	NA	NA	NA	NA	NA	3q11.2	NA	NA	NA	NA	rs13100993	0.62	0.62	0.669	0.624601	0.5507	0.4931	0.5159	0.8865	0.5593	0.55	0.56	0.49	0.89	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.911541	NA	NA	NA	NA	NA	0.565	NA	3.4493
1307	3	97957539	97957539	C	T	intergenic	OR5H15,OR5H6	dist=69054;dist=25590	NA	NA	ncRNA_exonic	ENSG00000187900	NA	NA	NA	NA	NA	3q11.2	NA	NA	NA	NA	rs6439725	0.62	0.62	0.638	0.627995	0.5507	0.4931	0.5173	0.8986	0.5593	0.55	0.56	0.49	0.9	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.911477	NA	1	NA	NA	NA	0.565	NA	3.4493
1307	15	72896802	72896802	C	T	intergenic	MIR630,GOLGA6B	dist=17148;dist=50236	NA	NA	upstream	ENSG00000260144	NA	NA	NA	NA	NA	15q24.1	NA	NA	NA	NA	rs16957189	0.12	0.12	0.103	0.13139	0.0507	0.002	0.147	0.3646	0.0215	0.03	0.0035	0.13	0.37	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.467225	NA	NA	NA	NA	NA	0.13	NA	3.4493
1307	16	52502318	52502318	A	G	intronic	TOX3	NA	NA	NA	intronic	ENSG00000103460	NA	NA	NA	NA	NA	16q12.1	NA	NA	NA	NA	rs2287144	0.59	0.59	0.581	0.615016	0.5507	0.7907	0.5634	0.4985	0.6943	0.55	0.77	0.58	0.46	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.166239	NA	NA	NA	NA	NA	0.478	NA	3.4493
1307	16	52502571	52502571	A	C	intronic	TOX3	NA	NA	NA	intronic	ENSG00000103460	NA	NA	NA	NA	NA	16q12.1	NA	NA	NA	NA	rs9928698	0.59	0.59	0.577	0.616014	0.5507	0.7907	0.5648	0.4985	0.6984	0.55	0.77	0.58	0.46	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.900729	NA	NA	NA	NA	NA	0.507	NA	3.4493
1307	21	42749189	42749189	A	G	intronic	MX2	NA	NA	NA	intronic	ENSG00000183486	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs379839	0.57	0.57	0.585	0.59405	0.5507	0.4187	0.3948	0.9357	0.499	0.54	0.39	0.44	0.92	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.023482	NA	NA	NA	NA	NA	0.703	NA	3.4493
1307	2	29240005	29240005	T	C	intronic	FAM179A	NA	NA	NA	intronic	ENSG00000189350	NA	NA	NA	Score=549;Name=lod=227	NA	2p23.2	NA	NA	NA	NA	rs13409097	0.41	0.41	0.379	0.38738	0.5109	0.5139	0.5245	0.0628	0.4714	0.49	0.52	0.54	0.08	0.4953	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.505836	3.505836	NA	0.544823	0.145719	NA	0.384	NA	3.448977
1307	19	985815	985815	T	G	intronic	WDR18	NA	NA	NA	intronic	ENSG00000065268	NA	NA	NA	NA	NA	19p13.3	NA	Name=USF-1	NA	NA	rs2074573	0.42	0.42	0.39	0.399561	0.5577	0.2788	0.4207	0.4418	0.2894	0.55	0.24	0.41	0.42	0.4634	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.105455	NA	NA	0.53	0.439174	NA	0.355	NA	3.4489
1307	20	30451844	30451844	C	T	intronic	DUSP15	NA	NA	NA	intronic	ENSG00000149599	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs6087786	0.2	0.2	0.201	0.176917	0.2982	0.002	0.196	0.298	0.0552	0.3	0.0035	0.23	0.28	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.922467	NA	NA	0.252986	0.271676	NA	0.203	NA	3.448814
1307	11	74880856	74880856	C	A	intronic	SLCO2B1	NA	NA	NA	UTR3	ENSG00000137491	ENST00000526839:c.*12C>A	NA	NA	NA	NA	11q13.4	NA	NA	NA	NA	rs7125268	0.32	0.32	0.322	0.357428	0.2117	0.3105	0.4611	0.4516	0.3548	0.19	0.34	0.4	0.43	0.2901	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.674711	NA	NA	0.216166	0.401591	NA	0.297	NA	3.4487007
1307	6	168458074	168458074	G	A	intronic	FRMD1	NA	NA	NA	intronic	ENSG00000153303	NA	NA	NA	NA	NA	6q27	NA	NA	NA	NA	rs3734900	0.45	0.45	0.437	0.45627	0.5517	0.5337	0.4308	0.1513	0.7086	0.57	0.52	0.46	0.19	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.838755	NA	NA	NA	NA	NA	0.449	NA	3.4483
1307	7	6754356	6754356	A	G	intergenic	ZNF12,PMS2CL	dist=7790;dist=20580	NA	NA	ncRNA_intronic	ENSG00000187953	NA	NA	NA	NA	NA	7p22.1	NA	NA	NA	NA	rs6947883	0.73	0.73	0.765	0.814896	0.5517	0.876	0.683	0.9811	0.8916	0.55	0.84	0.63	0.96	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.669876	NA	NA	NA	NA	NA	0.659	NA	3.4483
1307	8	28707570	28707570	C	T	intronic	INTS9	NA	NA	NA	intronic	ENSG00000104299	NA	NA	NA	NA	NA	8p21.1	NA	NA	NA	NA	rs4732887	0.42	0.42	0.375	0.374002	0.5517	0.2589	0.5692	0.1952	0.4131	0.55	0.28	0.58	0.27	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.279455	NA	NA	NA	NA	NA	0.348	NA	3.4483
1307	12	12790737	12790737	G	A	intronic	CREBL2	NA	NA	NA	intronic	ENSG00000111269	NA	NA	NA	NA	NA	12p13.2	NA	NA	NA	NA	rs10845599	0.41	0.41	0.374	0.359625	0.5517	0.4216	0.3184	0.1505	0.41	0.57	0.42	0.36	0.18	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.324329	NA	NA	NA	NA	NA	0.442	NA	3.4483
1307	16	1817431	1817431	C	T	intronic	MAPK8IP3	NA	NA	NA	intronic	ENSG00000138834	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs2575369	0.38	0.38	0.329	0.317292	0.5517	0.2629	0.4712	0.1233	0.2853	0.56	0.24	0.51	0.16	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.372542	NA	NA	NA	NA	NA	0.348	NA	3.4483
1307	16	56401294	56401294	T	C	intronic	AMFR	NA	NA	NA	intronic	ENSG00000159461	NA	NA	NA	NA	NA	16q12.2	NA	NA	NA	NA	rs2241957	0.65	0.65	0.69	0.712061	0.5517	0.6091	0.5692	0.9455	0.7689	0.56	0.6	0.56	0.92	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.267068	NA	NA	NA	NA	NA	0.754	NA	3.4483
1307	19	51518297	51518297	A	G	intronic	KLK10	NA	NA	NA	intronic	ENSG00000129451	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs2075695	0.63	0.63	0.613	0.620807	0.5517	0.5397	0.6254	0.9289	0.3558	0.56	0.51	0.62	0.89	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.713645	NA	NA	NA	NA	NA	0.725	NA	3.4483
1307	7	105146359	105146359	C	G	intronic	PUS7	NA	NA	NA	intronic	ENSG00000091127	NA	NA	NA	NA	NA	7q22.3	NA	NA	NA	NA	rs818471	0.25	0.25	0.254	0.259984	0.1819	0.1716	0.2233	0.4425	0.2106	0.19	0.16	0.22	0.44	0.2053	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.486344	NA	NA	0.164844	0.398274	NA	0.246	NA	3.447956
1307	21	46074202	46074202	A	G	exonic	KRTAP12-4	NA	synonymous SNV	KRTAP12-4:NM_198698:exon1:c.T330C:p.T110T	exonic	ENSG00000212933	NA	synonymous SNV	ENSG00000212933:ENST00000391618:exon1:c.T330C:p.T110T	NA	NA	21q22.3	NA	NA	NA	NA	rs9984726	0.76	0.76	0.737	0.785144	0.7624	0.6458	0.7493	0.9191	0.7965	0.76	0.62	0.77	0.92	0.7453	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.375121	NA	NA	0.711446	0.895025	NA	0.616	NA	3.4475206
1307	1	20991273	20991273	G	A	intronic	KIF17	NA	NA	NA	intronic	ENSG00000117245	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs56070322	0.13	0.13	0.111	0.126198	0.1879	0.127	0.1556	0.0522	0.1411	0.17	0.12	0.18	0.05	0.1712	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.357101	NA	NA	0.193488	0.064004	NA	0.203	NA	3.447412
1307	4	2176506	2176506	C	T	intronic	POLN	NA	NA	NA	intronic	ENSG00000130997	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs6822665	0.39	0.39	0.414	0.409944	0.159	0.373	0.2709	0.8487	0.2117	0.16	0.37	0.27	0.85	0.2419	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.674544	NA	NA	0.151744	0.745347	NA	0.449	NA	3.447356
1307	11	124109169	124109169	C	G	intergenic	OR8G2,OR8G1	dist=12857;dist=11254	NA	NA	ncRNA_exonic	ENSG00000254845	NA	NA	NA	NA	NA	11q24.2	NA	NA	NA	NA	rs2466657	0.5	0.5	0.453	0.444688	0.5527	0.5833	0.5591	0.3154	0.2843	0.54	0.59	0.54	0.31	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.0334	NA	NA	NA	NA	NA	0.297	NA	3.4473
1307	15	50087964	50087964	C	A	intergenic	DTWD1,ATP8B4	dist=150631;dist=62471	NA	NA	ncRNA_exonic	ENSG00000259388	NA	NA	NA	NA	NA	15q21.2	NA	NA	NA	NA	rs521695	0.53	0.53	0.539	0.503594	0.5527	0.4643	0.4841	0.5825	0.4008	0.55	0.46	0.48	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.053917	NA	NA	NA	NA	NA	0.42	NA	3.4473
1307	19	51430868	51430868	G	A	intergenic	KLK4,KLK5	dist=16874;dist=15691	NA	NA	upstream	ENSG00000228674	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs59881416	0.05	0.05	0.033	0.0409345	0.0527	NA	0.0447	0.0787	0.0174	0.06	NA	0.06	0.08	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.16655	NA	NA	NA	NA	NA	0.022	NA	3.4473
1307	1	54706733	54706733	A	G	intronic	SSBP3	NA	NA	NA	intronic	ENSG00000157216	NA	NA	NA	NA	NA	1p32.3	NA	NA	NA	NA	rs2297027	0.59	0.59	0.555	0.659545	0.5527	0.4355	0.6643	0.8139	0.7883	0.56	0.44	0.61	0.8	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.305073	NA	NA	NA	NA	NA	0.464	NA	3.4473
1307	6	44270365	44270365	C	G	intronic	AARS2	NA	NA	NA	intronic	ENSG00000124608,ENSG00000272442	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs325004	0.45	0.45	0.409	0.426717	0.5527	0.4157	0.6066	0.2088	0.4755	0.55	0.44	0.62	0.19	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.050253	NA	NA	NA	NA	NA	0.442	NA	3.4473
1307	7	27566053	27566053	G	C	intronic	HIBADH	NA	NA	NA	intronic	ENSG00000106049	NA	NA	NA	NA	NA	7p15.2	NA	NA	NA	NA	rs12700813	0.75	0.75	0.777	0.766573	0.5527	0.9583	0.6412	0.9062	0.6892	0.56	0.95	0.61	0.91	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.561236	1.561236	NA	NA	NA	NA	0.688	NA	3.4473
1307	8	10692359	10692359	C	T	intronic	PINX1	NA	NA	NA	intronic	ENSG00000171056,ENSG00000254093,ENSG00000258724	NA	NA	NA	NA	NA	8p23.1	NA	NA	NA	NA	rs1549796	0.5	0.5	NA	0.512181	0.5527	0.2212	0.4107	0.7806	0.4796	0.55	0.2	0.48	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.168141	NA	NA	NA	NA	NA	0.594	NA	3.4473
1307	9	137688427	137688427	T	G	intronic	COL5A1	NA	NA	NA	intronic	ENSG00000130635	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs3811162	0.69	0.69	0.727	0.702875	0.5527	0.8274	0.5562	0.8707	0.6063	0.56	0.82	0.57	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.169062	NA	NA	NA	NA	NA	0.732	NA	3.4473
1307	13	26436641	26436641	C	T	intronic	ATP8A2	NA	NA	NA	intronic	ENSG00000132932	NA	NA	NA	NA	NA	13q12.13	NA	NA	NA	NA	rs2249800	0.5	0.5	0.502	0.503195	0.5527	0.5546	0.3963	0.4213	0.5859	0.56	0.53	0.42	0.44	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.464019	NA	NA	NA	NA	NA	0.464	NA	3.4473
1307	17	4535413	4535413	T	C	intronic	ALOX15	NA	NA	NA	intronic	ENSG00000161905	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs6502804	0.53	0.53	0.52	0.532348	0.5527	0.5129	0.4697	0.5643	0.5327	0.55	0.51	0.48	0.54	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.422259	NA	NA	NA	NA	NA	0.594	NA	3.4473
1307	1	205031744	205031744	G	A	intronic	CNTN2	NA	NA	NA	intronic	ENSG00000184144	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs2242001	0.23	0.23	0.207	0.232029	0.1759	0.3958	0.2651	0.0946	0.2832	0.18	0.41	0.27	0.09	0.2071	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.602972	NA	NA	0.169884	0.118929	NA	0.145	NA	3.447116
1307	3	197249693	197249693	C	T	intronic	BDH1	NA	NA	NA	intronic	ENSG00000161267	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs3828369	0.18	0.18	0.18	0.179712	0.1849	0.1012	0.2161	0.264	0.1155	0.17	0.1	0.21	0.27	0.1806	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.539066	NA	NA	0.187442	0.235588	NA	0.138	NA	3.447058
1307	8	99057526	99057526	G	A	intronic	RPL30	NA	NA	NA	intronic	ENSG00000156482	NA	NA	NA	NA	NA	8q22.2	NA	Name=Sin3Ak-20,Pol2(b),c-Myc,BCLAF1_(M33-P5B11),Pol2,Max	NA	NA	rs812	0.3	0.3	0.284	0.250599	0.5577	0.0794	0.3242	0.1278	0.2249	0.56	0.06	0.38	0.12	0.4163	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.297383	1.297383	NA	0.578953	0.206083	NA	0.297	NA	3.447047
1307	1	167032796	167032796	C	T	intronic	GPA33	NA	NA	NA	intronic	ENSG00000143167	NA	NA	NA	NA	NA	1q24.1	NA	NA	NA	NA	rs12742013	0.11	0.11	0.115	0.0934505	0.2107	NA	0.1081	0.0764	0.0818	0.21	NA	0.12	0.09	0.1556	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.530721	NA	NA	0.18686	0.089424	NA	0.094	NA	3.44684
1307	5	132036252	132036252	T	C	intronic	KIF3A	NA	NA	NA	ncRNA_intronic	ENSG00000230612	NA	NA	NA	NA	NA	5q31.1	NA	NA	NA	NA	rs1468216	0.87	0.87	0.858	0.845048	0.8867	0.9196	0.8473	0.7595	0.8395	0.89	0.92	0.9	0.75	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.267202	1.267202	NA	NA	NA	NA	0.87	NA	3.4466333
1307	16	56686002	56686002	G	C	intronic	MT1B	NA	NA	NA	ncRNA_intronic	ENSG00000259923	NA	NA	NA	NA	NA	16q12.2	NA	NA	NA	NA	rs2070838	0.76	0.76	0.729	0.735423	0.8867	0.7004	0.8775	0.5303	0.7924	0.89	0.71	0.87	0.52	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.333521	NA	NA	NA	NA	NA	0.746	NA	3.4466333
1307	16	56686005	56686005	T	A	intronic	MT1B	NA	NA	NA	ncRNA_intronic	ENSG00000259923	NA	NA	NA	NA	NA	16q12.2	NA	NA	NA	NA	rs4619400	0.76	0.76	0.724	0.735423	0.8867	0.7004	0.8775	0.5303	0.7924	0.89	0.71	0.87	0.52	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.129947	NA	NA	NA	NA	NA	0.746	NA	3.4466333
1307	16	56686030	56686030	C	G	intronic	MT1B	NA	NA	NA	ncRNA_intronic	ENSG00000259923	NA	NA	NA	NA	NA	16q12.2	NA	NA	NA	NA	rs964372	0.76	0.76	0.733	0.735423	0.8867	0.7004	0.8775	0.5303	0.7924	0.89	0.71	0.87	0.52	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.543863	NA	NA	NA	NA	NA	0.746	NA	3.4466333
1307	17	72769694	72769694	A	G	intronic	NAT9	NA	NA	NA	intronic	ENSG00000109065	NA	NA	NA	NA	NA	17q25.1	NA	Name=Pol2	NA	NA	rs878907	0.46	0.46	0.419	0.460064	0.5417	0.2897	0.549	0.4796	0.4622	0.54	0.29	0.53	0.49	0.5028	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.72216	NA	NA	0.508953	0.470268	NA	0.5	NA	3.446547
1307	13	32335840	32335840	A	T	intronic	RXFP2	NA	NA	NA	intronic	ENSG00000133105	NA	NA	NA	NA	NA	13q13.1	NA	NA	NA	NA	rs9532478	0.18	0.18	0.153	0.186302	0.1839	0.2292	0.1744	0.1157	0.2485	0.19	0.24	0.16	0.11	0.1914	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.495371	1.495371	NA	0.178256	0.15547	NA	0.217	NA	3.446444
1307	18	2738580	2738580	C	T	intronic	SMCHD1	NA	NA	NA	ncRNA_intronic	ENSG00000266049	NA	NA	NA	NA	NA	18p11.32	NA	NA	NA	NA	rs8094260	0.35	0.35	0.316	0.387181	0.2634	0.5228	0.4481	0.2716	0.4877	0.27	0.46	0.39	0.3	0.3429	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.169278	NA	NA	0.280708	0.260518	NA	0.355	NA	3.4463253
1307	4	165850688	165850688	G	C	intergenic	LOC100506013,TRIM61	dist=32012;dist=24910	NA	NA	ncRNA_exonic	ENSG00000221891	NA	NA	NA	NA	NA	4q32.3	NA	NA	NA	NA	rs5027302	0.58	0.58	0.552	0.607428	0.5537	0.7401	0.6398	0.4826	0.6718	0.54	0.69	0.62	0.46	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.139341	NA	NA	NA	NA	NA	0.638	NA	3.4463
1307	5	148989312	148989312	A	G	intronic	ARHGEF37	NA	NA	NA	intronic	ENSG00000183111	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs7443869	0.42	0.42	0.402	0.382388	0.5537	0.3651	0.3343	0.2943	0.3773	0.56	0.38	0.36	0.33	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.085598	NA	NA	NA	NA	NA	0.5	NA	3.4463
1307	5	148989320	148989320	T	C	intronic	ARHGEF37	NA	NA	NA	intronic	ENSG00000183111	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs7447560	0.42	0.42	0.39	0.382388	0.5537	0.3651	0.3343	0.2943	0.3773	0.56	0.38	0.36	0.33	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.576779	NA	NA	NA	NA	NA	0.5	NA	3.4463
1307	9	79259592	79259592	C	T	intronic	PRUNE2	NA	NA	NA	intronic	ENSG00000106772	NA	NA	NA	NA	NA	9q21.2	NA	NA	NA	NA	rs511040	0.59	0.59	0.599	0.620807	0.5537	0.622	0.536	0.6762	0.6738	0.54	0.62	0.54	0.67	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.633194	NA	NA	NA	NA	NA	0.681	NA	3.4463
1307	14	107160069	107160069	A	G	intergenic	LINC00221,NONE	dist=208540;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000253703	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs6576212	0.62	0.62	0.63	0.665535	0.5537	0.5119	0.5375	0.907	0.7035	0.55	0.48	0.57	0.92	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.203838	NA	NA	NA	NA	NA	NA	NA	3.4463
1307	2	10135956	10135956	G	A	intronic	GRHL1	NA	NA	NA	intronic	ENSG00000134317	NA	NA	NA	NA	NA	2p25.1	NA	NA	NA	NA	rs41264205	0.17	0.17	0.165	0.190096	0.1799	0.1409	0.2017	0.2292	0.1902	0.17	0.12	0.2	0.23	0.1862	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.491709	NA	NA	0.187907	0.246709	ID=COSN166012;OCCURENCE=1(NS)	0.13	NA	3.445993
1307	10	43696086	43696086	C	T	intronic	RASGEF1A	NA	NA	NA	intronic	ENSG00000198915	NA	NA	NA	NA	NA	10q11.21	NA	NA	NA	NA	rs1254963	0.23	0.23	0.208	0.233826	0.171	0.5159	0.2118	0.0219	0.3098	0.18	0.5	0.17	0.02	0.2099	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.173312	NA	NA	0.173301	0.057727	NA	0.138	NA	3.445799
1307	5	43297032	43297032	C	T	intronic	HMGCS1	NA	NA	NA	intronic	ENSG00000112972	NA	NA	NA	NA	NA	5p12	NA	NA	NA	NA	rs3733768	0.47	0.47	0.471	0.478235	0.5547	0.1974	0.5072	0.6377	0.453	0.53	0.22	0.53	0.62	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.897237	NA	NA	NA	NA	ID=COSN167458;OCCURENCE=1(large_intestine),1(endometrium)	0.558	NA	3.4453
1307	10	8019124	8019124	A	G	intronic	TAF3	NA	NA	NA	intronic	ENSG00000165632	NA	NA	NA	NA	NA	10p14	NA	NA	NA	NA	rs10795584	0.48	0.48	0.447	0.478235	0.5547	0.4157	0.621	0.3865	0.4867	0.55	0.42	0.65	0.34	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.608811	NA	NA	NA	NA	NA	0.558	NA	3.4453
1307	14	107160067	107160067	C	T	intergenic	LINC00221,NONE	dist=208538;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000253703	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs6576211	0.62	0.62	0.632	0.665735	0.5547	0.5119	0.5375	0.907	0.7035	0.55	0.48	0.57	0.92	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.055329	NA	NA	NA	NA	NA	NA	NA	3.4453
1307	14	107160126	107160126	T	C	intergenic	LINC00221,NONE	dist=208597;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000253703	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs8003761	0.62	0.62	0.645	0.665935	0.5547	0.5119	0.5375	0.9077	0.7035	0.55	0.48	0.57	0.92	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.100008	NA	NA	NA	NA	NA	0.732	NA	3.4453
1307	17	79255912	79255912	C	T	intronic	SLC38A10	NA	NA	NA	intronic	ENSG00000157637	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs7213540	0.52	0.52	0.577	0.52476	0.5547	0.3065	0.5014	0.8185	0.3384	0.54	0.28	0.49	0.8	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.755861	NA	NA	NA	NA	NA	0.428	NA	3.4453
1307	21	47417303	47417303	T	C	intronic	COL6A1	NA	NA	NA	intronic	ENSG00000142156	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs2839077	0.53	0.53	0.464	0.511581	0.5	0.7083	0.6715	0.3321	0.4499	0.48	0.69	0.64	0.32	0.5375	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.689541	NA	NA	0.517326	0.385837	NA	0.478	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000079750.1;CLNDSDB=.;CLNDSDBID=.	3.445174
1308	13	32332556	32332556	C	T	intronic	RXFP2	NA	NA	NA	intronic	ENSG00000133105	NA	NA	NA	NA	NA	13q13.1	NA	NA	NA	NA	rs61946567	0.19	0.19	0.158	0.192292	0.1839	0.2302	0.1758	0.1369	0.2485	0.19	0.24	0.16	0.14	0.193	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.070933	NA	NA	0.17814	0.171584	NA	0.217	NA	3.44496
1308	2	118753097	118753097	C	T	intronic	CCDC93	NA	NA	NA	intronic	ENSG00000125633	NA	NA	NA	NA	NA	2q14.1	NA	NA	NA	NA	rs17584619	0.09	0.09	0.076	0.0710863	0.1978	0.003	0.1254	0.0053	0.0613	0.19	0.0017	0.14	0.01	0.1551	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.757102	NA	NA	0.202442	0.035406	NA	0.051	NA	3.444658
1308	19	5786718	5786718	A	G	intronic	DUS3L	NA	NA	NA	intronic	ENSG00000141994	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs2305927	0.3	0.3	0.269	0.311701	0.165	0.5437	0.1873	0.3298	0.2873	0.17	0.49	0.21	0.33	0.2397	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.70257	NA	NA	0.150687	0.295123	NA	0.268	NA	3.444613
1308	10	73579217	73579217	C	T	intronic	PSAP	NA	NA	NA	intronic	ENSG00000197746	NA	NA	NA	NA	NA	10q22.1	NA	NA	NA	NA	rs11000016	0.17	0.17	0.168	0.163339	0.1968	0.2431	0.1484	0.1089	0.1309	0.19	0.22	0.13	0.12	0.1744	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.311347	NA	NA	0.184302	0.129823	NA	0.167	NA	3.444498
1308	1	55518166	55518166	G	A	intronic	PCSK9	NA	NA	NA	intronic	ENSG00000169174	NA	NA	NA	NA	NA	1p32.3	NA	NA	NA	NA	rs625619	0.58	0.58	0.541	0.549321	0.5557	0.8046	0.7147	0.2738	0.5348	0.54	0.8	0.7	0.29	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.754239	NA	NA	NA	NA	NA	0.333	NA	3.4443
1308	3	46016599	46016599	T	G	intronic	FYCO1	NA	NA	NA	intronic	ENSG00000163820	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs3821884	0.59	0.59	0.569	0.627196	0.5557	0.6647	0.6729	0.5522	0.7311	0.58	0.63	0.65	0.52	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.438919	NA	NA	NA	NA	NA	0.558	NA	3.4443
1308	14	107160160	107160160	G	A	intergenic	LINC00221,NONE	dist=208631;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000253703	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs8023121	0.62	0.62	0.64	0.666134	0.5557	0.5119	0.5375	0.9077	0.7035	0.55	0.48	0.57	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.216731	NA	NA	NA	NA	NA	0.725	NA	3.4443
1308	15	23021113	23021113	G	A	intronic	NIPA2	NA	NA	NA	intronic	ENSG00000140157	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs7170784	0.39	0.39	0.352	0.379593	0.5557	0.2817	0.4697	0.1528	0.5419	0.57	0.27	0.48	0.16	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.735978	NA	NA	NA	NA	NA	0.268	NA	3.4443
1308	10	73579405	73579405	C	T	intronic	PSAP	NA	NA	NA	intronic	ENSG00000197746	NA	NA	NA	NA	NA	10q22.1	NA	NA	NA	NA	rs3747860	0.17	0.17	0.159	0.163339	0.1968	0.2431	0.1484	0.1089	0.1309	0.19	0.22	0.13	0.12	0.1746	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.379982	NA	NA	0.184302	0.13005	NA	0.167	NA	3.444298
1308	12	52843688	52843688	T	C	intronic	KRT6B	NA	NA	NA	intronic	ENSG00000185479	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs639374	0.26	0.26	0.2	NA	NA	NA	NA	NA	NA	0.3	0.4	0.25	0.04	0.2603	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.454484	NA	NA	0.29593	0.067862	NA	0.159	NA	3.44377
1308	14	93198972	93198972	A	T	intronic	LGMN	NA	NA	NA	intronic	ENSG00000100600	NA	NA	NA	NA	NA	14q32.12	NA	NA	NA	NA	rs12885208	0.13	0.13	0.108	0.108427	0.2028	0.0377	0.1657	0.0507	0.1217	0.2	0.05	0.17	0.07	0.1613	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.250357	NA	NA	0.192209	0.072628	NA	0.174	NA	3.443691
1308	1	109813510	109813510	A	T	intronic	CELSR2	NA	NA	NA	intronic	ENSG00000143126	NA	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	rs41279716	0.12	0.12	0.131	0.119409	0.1849	0.0546	0.0793	0.0734	0.2096	0.19	0.07	0.09	0.11	0.17	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.137042	2.137042	NA	0.201628	0.099637	NA	0.181	NA	3.443472
1308	15	34529776	34529776	A	G	intronic	SLC12A6	NA	NA	NA	intronic	ENSG00000140199	NA	NA	NA	NA	NA	15q14	NA	NA	NA	NA	rs17817806	0.2	0.2	0.185	0.207069	0.2058	0.2837	0.2017	0.1256	0.2434	0.22	0.27	0.2	0.11	0.189	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.486808	1.486808	NA	0.161819	0.119264	NA	0.094	NA	3.443381
1308	1	36921371	36921371	G	T	UTR3	MRPS15	NM_031280:c.*18C>A	NA	NA	UTR3	ENSG00000116898	ENST00000373116:c.*18C>A	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	rs1538634	0.27	0.27	0.256	0.235224	0.3032	0.246	0.4481	0.0726	0.2229	0.3	0.31	0.38	0.09	0.2876	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.681278	NA	NA	0.299186	0.1069	NA	0.188	NA	3.4433474
1308	1	36641729	36641729	C	T	intronic	MAP7D1	NA	NA	NA	intronic	ENSG00000116871	NA	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	rs2296263	0.48	0.48	0.451	0.446885	0.5567	0.502	0.4467	0.3238	0.4438	0.56	0.47	0.47	0.37	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.511298	1.511298	NA	NA	NA	NA	0.58	NA	3.4433
1308	1	227935280	227935280	C	T	intronic	SNAP47	NA	NA	NA	intronic	ENSG00000143740	NA	NA	NA	NA	NA	1q42.13	NA	NA	NA	NA	rs2236361	0.73	0.73	0.732	0.748003	0.5567	0.7887	0.7104	0.9531	0.6524	0.56	0.79	0.7	0.96	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.777087	NA	NA	NA	NA	NA	0.659	NA	3.4433
1308	12	124332702	124332702	A	G	intronic	DNAH10	NA	NA	NA	intronic	ENSG00000197653	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs10846561	0.39	0.39	0.367	0.366014	0.5567	0.2639	0.4236	0.2315	0.4162	0.56	0.26	0.43	0.23	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.453727	1.453727	NA	NA	NA	NA	0.377	NA	3.4433
1308	22	20096314	20096314	G	A	intronic	DGCR8	NA	NA	NA	intronic	ENSG00000128191	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs1633442	NA	NA	NA	0.560903	0.5567	0.6825	0.7248	0.3979	0.544	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.270876	NA	NA	NA	NA	NA	NA	NA	3.4433
1308	1	158058109	158058109	C	A	intronic	KIRREL	NA	NA	NA	intronic	ENSG00000183853	NA	NA	NA	NA	Name=Obesity-related traits	1q23.1	NA	NA	NA	NA	rs6427419	0.46	0.46	0.365	0.452476	0.5149	0.6974	0.5836	0.0257	0.6196	0.51	0.69	0.55	0.02	0.5241	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.657643	NA	NA	0.517907	0.122333	NA	0.536	NA	3.443093
1308	11	113618936	113618936	A	T	intronic	ZW10	NA	NA	NA	intronic	ENSG00000086827	NA	NA	NA	NA	NA	11q23.2	NA	NA	NA	NA	rs2271261	0.13	0.13	0.136	0.121006	0.1789	0.1359	0.1239	0.0552	0.1329	0.18	0.15	0.13	0.05	0.1694	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.192907	NA	NA	0.209032	0.08587	NA	0.217	NA	3.442668
1308	8	124659329	124659329	C	A	intronic	KLHL38	NA	NA	NA	ncRNA_intronic	ENSG00000253286	NA	NA	NA	NA	NA	8q24.13	NA	NA	NA	NA	rs11991744	0.8	0.8	0.831	0.78754	0.8907	0.7212	0.7666	0.8162	0.726	0.89	0.71	0.78	0.79	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.609426	NA	NA	NA	NA	NA	0.848	NA	3.4426333
1308	5	156644939	156644939	G	A	intronic	ITK	NA	NA	NA	ncRNA_intronic	ENSG00000253980	NA	NA	NA	NA	NA	5q33.3	NA	NA	NA	NA	rs246747	0.21	0.21	0.201	0.200879	0.3111	0.1984	0.3285	0.056	0.1953	0.29	0.17	0.33	0.05	0.2663	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.374109	NA	NA	0.313488	0.108715	NA	0.254	NA	3.4424453
1308	1	13173016	13173016	A	G	intergenic	PRAMEF5,LOC440563	dist=55265;dist=9944	NA	NA	ncRNA_exonic	ENSG00000236179	NA	NA	NA	NA	NA	1p36.21	NA	NA	NA	NA	rs1852947	0.48	0.48	0.442	0.444089	0.5577	0.4246	0.5317	0.3177	0.456	0.56	0.46	0.54	0.34	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.153165	NA	NA	NA	NA	NA	0.42	NA	3.4423
1308	9	32491240	32491240	C	T	intronic	DDX58	NA	NA	NA	intronic	ENSG00000107201	NA	NA	NA	NA	NA	9p21.1	NA	NA	NA	NA	rs6476363	0.39	0.39	0.355	0.407748	0.5577	0.2212	0.4755	0.3169	0.5204	0.54	0.18	0.49	0.3	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.406962	NA	NA	NA	NA	ID=COSN168501;OCCURENCE=1(large_intestine)	0.493	NA	3.4423
1308	9	127245412	127245412	C	T	intronic	NR5A1	NA	NA	NA	intronic	ENSG00000136931	NA	NA	NA	NA	NA	9q33.3	NA	NA	NA	NA	rs7037254	0.37	0.37	0.368	0.335264	0.5577	0.247	0.3285	0.2231	0.3538	0.54	0.22	0.36	0.29	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.573326	2.573326	NA	NA	NA	NA	0.37	NA	3.4423
1308	19	50882169	50882169	A	G	intronic	NR1H2	NA	NA	NA	intronic	ENSG00000131408	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs2248949	0.7	0.7	0.686	0.722843	0.5577	0.8661	0.6455	0.792	0.7065	0.54	0.88	0.63	0.78	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.130598	NA	NA	NA	NA	NA	0.645	NA	3.4423
1308	22	17395070	17395070	C	G	intergenic	HSFY1P1,GAB4	dist=84845;dist=47757	NA	NA	downstream	ENSG00000253691	NA	NA	NA	NA	NA	22q11.1	NA	NA	NA	NA	rs9618932	0.05	0.05	0.045	0.0463259	0.0577	NA	0.0461	0.0998	0.0102	0.06	NA	0.04	0.11	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.963121	NA	NA	NA	NA	NA	0.065	NA	3.4423
1308	12	99119340	99119340	G	A	intronic	APAF1	NA	NA	NA	intronic	ENSG00000120868	NA	NA	NA	NA	NA	12q23.1	NA	NA	NA	NA	rs2304006	0.09	0.09	0.089	0.0884585	0.1759	0.0248	0.121	0.0068	0.1513	0.18	0.03	0.12	0.01	0.1649	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.009274	NA	NA	0.217326	0.042896	NA	0.036	NA	3.441874
1308	14	105692697	105692697	G	C	intronic	BRF1	NA	NA	NA	intronic	ENSG00000185024	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs12883636	0.34	0.34	0.333	0.344649	0.2843	0.0179	0.304	0.8533	0.0849	0.27	0.02	0.3	0.83	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.753686	NA	NA	0.274041	0.772399	NA	0.435	NA	3.441659
1308	8	67364085	67364085	T	C	intronic	ADHFE1	NA	NA	NA	intronic	ENSG00000147576	NA	NA	NA	NA	NA	8q13.1	NA	NA	NA	NA	rs2465982	0.66	0.66	0.659	0.686701	0.5586	0.5923	0.7608	0.8676	0.6186	0.54	0.63	0.71	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.120532	NA	NA	NA	NA	NA	0.623	NA	3.4414
1308	17	47021418	47021418	A	C	intronic	SNF8	NA	NA	NA	intronic	ENSG00000159210	NA	NA	NA	NA	NA	17q21.32	NA	NA	NA	NA	rs12603612	0.44	0.44	0.43	0.424121	0.5586	0.6825	0.4524	0.0658	0.4836	0.52	0.66	0.41	0.07	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.51457	NA	NA	NA	NA	NA	0.362	NA	3.4414
1308	17	47021428	47021428	C	G	intronic	SNF8	NA	NA	NA	intronic	ENSG00000159210	NA	NA	NA	NA	NA	17q21.32	NA	NA	NA	NA	rs2411375	0.43	0.43	0.131	0.424121	0.5586	0.6825	0.4524	0.0658	0.4836	0.52	0.65	0.41	0.07	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.791388	NA	NA	NA	NA	NA	0.159	NA	3.4414
1308	19	41704304	41704304	T	C	intronic	CYP2S1	NA	NA	NA	intronic	ENSG00000167600	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs338593	0.58	0.58	0.584	0.586062	0.5586	0.5744	0.3948	0.7526	0.5368	0.55	0.54	0.47	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.434581	NA	NA	NA	NA	NA	0.609	NA	3.4414
1308	11	33780163	33780163	A	T	intronic	FBXO3	NA	NA	NA	intronic	ENSG00000110429	NA	NA	NA	NA	NA	11p13	NA	NA	NA	NA	rs1522086	0.13	0.13	0.128	0.122804	0.1948	0.0248	0.0893	0.1384	0.1524	0.2	0.02	0.12	0.15	0.1654	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.767744	NA	NA	0.198464	0.154178	NA	0.072	NA	3.441336
1308	2	74087290	74087290	T	C	intronic	STAMBP	NA	NA	NA	intronic	ENSG00000124356	NA	NA	NA	NA	NA	2p13.1	NA	NA	NA	NA	rs1025424	0.16	0.16	0.156	0.158546	0.1779	0.005	0.2219	0.2708	0.1002	0.19	0.01	0.2	0.27	0.1776	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.024055	NA	NA	0.203256	0.279619	NA	0.254	NA	3.441244
1308	11	20660149	20660149	C	T	intronic	SLC6A5	NA	NA	NA	intronic	ENSG00000165970	NA	NA	NA	NA	NA	11p15.1	NA	NA	NA	NA	rs72932948	0.1	0.1	0.082	0.0722843	0.1879	0.002	0.1398	0.0144	0.0562	0.2	0.0017	0.16	0.02	0.1609	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.944323	NA	NA	0.210233	0.041307	NA	0.051	NA	3.440967
1308	22	50943423	50943423	G	A	intronic	LMF2	NA	NA	NA	intronic	ENSG00000100258	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs762669	0.13	0.13	0.127	0.107029	0.2008	0.0288	0.1153	0.0998	0.0951	0.2	0.02	0.14	0.11	0.1552	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.443642	1.443642	NA	0.20307	0.099091	NA	0.072	NA	3.44093
1308	1	176915022	176915022	A	G	intronic	ASTN1	NA	NA	NA	intronic	ENSG00000152092	NA	NA	NA	NA	NA	1q25.2	NA	NA	NA	NA	rs2076070	0.23	0.23	0.226	0.240016	0.163	0.1488	0.3026	0.4259	0.1176	0.16	0.15	0.28	0.4	0.2095	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.066473	NA	NA	0.186744	0.382433	NA	0.167	NA	3.440756
1308	3	136573289	136573289	G	A	UTR5	SLC35G2	NM_001097599:c.-14G>A,NM_001097600:c.-14G>A,NM_025246:c.-14G>A	NA	NA	ncRNA_UTR5	ENSG00000168917	NA	NA	NA	NA	NA	3q22.3	Score=881;Name=V$GATA1_04	NA	NA	NA	rs9865545	0.71	0.71	0.678	0.702077	0.6551	0.8492	0.7651	0.5613	0.7444	0.65	0.86	0.75	0.59	0.7133	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.071013	NA	NA	0.690889	0.599609	NA	0.536	NA	3.440711
1308	14	88936254	88936254	A	G	intronic	PTPN21	NA	NA	NA	UTR3	ENSG00000042317	ENST00000556406:c.*43A>G	NA	NA	NA	NA	14q31.3	NA	NA	NA	NA	rs2297128	0.26	0.26	0.256	0.24401	0.2286	0.3522	0.2104	0.1967	0.2362	0.24	0.34	0.22	0.22	0.2384	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.011461	NA	NA	0.259186	0.206764	NA	0.283	NA	3.4404807
1308	1	167082869	167082869	G	A	intronic	DUSP27	NA	NA	NA	intronic	ENSG00000198842	NA	NA	NA	NA	NA	1q24.1	NA	NA	NA	NA	rs12122365	0.7	0.7	0.716	0.666334	0.5596	0.8929	0.4986	0.7958	0.4867	0.56	0.92	0.55	0.78	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.878741	NA	NA	NA	NA	NA	0.674	NA	3.4404
1308	9	138480486	138480486	C	T	intergenic	LOC100130954,GLT6D1	dist=1528;dist=35016	NA	NA	ncRNA_exonic	ENSG00000224045	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs3849218	0.44	0.44	0.44	0.418331	0.5596	0.2798	0.4597	0.3593	0.4663	0.56	0.29	0.45	0.42	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.294528	NA	NA	NA	NA	NA	0.138	NA	3.4404
1308	15	40494498	40494498	G	A	intronic	BUB1B	NA	NA	NA	intronic	ENSG00000156970	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs2305653	0.49	0.49	0.52	0.492013	0.5596	0.2817	0.4928	0.5968	0.4969	0.55	0.29	0.49	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.562579	NA	NA	NA	NA	NA	0.58	NA	3.4404
1308	15	43453056	43453056	C	G	intronic	TMEM62	NA	NA	NA	intronic	ENSG00000137842	NA	NA	NA	NA	NA	15q15.2	NA	NA	NA	NA	rs11070392	0.34	0.34	0.321	0.299521	0.5596	0.2669	0.3991	0.025	0.3661	0.56	0.27	0.43	0.03	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.526484	NA	NA	NA	NA	NA	0.304	NA	3.4404
1308	16	5415971	5415971	A	G	intergenic	FAM86A,RBFOX1	dist=268182;dist=653161	NA	NA	ncRNA_exonic	ENSG00000261007	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs4786026	0.51	0.51	0.51	0.501398	0.5596	0.3859	0.5288	0.5393	0.4898	0.56	0.41	0.54	0.53	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.92508	NA	NA	NA	NA	NA	0.551	NA	3.4404
1308	18	60110469	60110469	T	G	intergenic	TNFRSF11A,ZCCHC2	dist=55526;dist=80189	NA	NA	downstream	ENSG00000266920	NA	NA	NA	NA	NA	18q21.33	NA	NA	NA	NA	rs74413211	0.07	0.07	0.05	0.067492	0.0596	0.0248	0.0749	0.1437	0.0112	0.05	0.03	0.08	0.12	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.615472	NA	NA	NA	NA	NA	0.058	NA	3.4404
1308	19	18679155	18679155	C	T	intronic	KXD1	NA	NA	NA	intronic	ENSG00000105700	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs1468475	0.52	0.52	0.5	0.481629	0.5596	0.6905	0.5648	0.2126	0.4908	0.58	0.69	0.54	0.24	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.10851	NA	NA	NA	NA	NA	0.428	NA	3.4404
1308	19	49638956	49638956	C	G	intronic	PPFIA3	NA	NA	NA	intronic	ENSG00000177380	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs745124	0.53	0.53	0.522	0.555711	0.5596	0.256	0.5548	0.7905	0.544	0.57	0.25	0.6	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.507633	NA	NA	NA	NA	NA	0.522	NA	3.4404
1308	19	37967214	37967214	C	T	intronic	ZNF570	NA	NA	NA	intronic	ENSG00000171827	NA	NA	NA	NA	NA	19q13.12	NA	NA	NA	NA	rs7253091	0.3	0.3	0.283	0.33766	0.1541	0.2986	0.2594	0.4992	0.4039	0.15	0.33	0.28	0.5	0.2366	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.332913	NA	NA	0.169186	0.451884	NA	0.29	NA	3.440114
1308	7	25264847	25264847	T	A	intronic	NPVF	NA	NA	NA	intronic	ENSG00000105954	NA	NA	NA	NA	NA	7p15.3	NA	NA	NA	NA	rs2717854	0.28	0.28	0.288	0.283946	0.2793	0.1458	0.3199	0.3911	0.2607	0.27	0.14	0.33	0.43	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.485878	NA	NA	0.280641	0.374277	NA	0.304	NA	3.440059
1308	19	20808515	20808515	T	A	intronic	ZNF626	NA	NA	NA	ncRNA_intronic	ENSG00000269110	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs1968385	0.8	0.8	0.787	0.779153	0.8936	0.8343	0.8804	0.5802	0.8016	0.88	0.83	0.9	0.58	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.310571	NA	NA	NA	NA	NA	0.703	NA	3.4397333
1308	1	203036757	203036757	T	C	intronic	PPFIA4	NA	NA	NA	intronic	ENSG00000143847	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs2275354	0.48	0.48	0.465	0.485623	0.5606	0.4107	0.4856	0.4183	0.5767	0.58	0.36	0.5	0.45	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.044346	NA	NA	NA	NA	NA	0.609	NA	3.4394
1308	4	58969387	58969387	G	C	intergenic	LOC255130,NONE	dist=897922;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000248660	NA	NA	NA	NA	NA	4q12	NA	NA	NA	NA	rs2660945	0.52	0.52	0.491	0.511781	0.5606	0.4891	0.6239	0.4697	0.4622	0.55	0.5	0.58	0.45	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.052448	NA	NA	NA	NA	NA	0.486	NA	3.4394
1308	4	58969479	58969479	A	G	intergenic	LOC255130,NONE	dist=898014;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000248660	NA	NA	NA	NA	NA	4q12	NA	NA	NA	NA	rs7693197	0.52	0.52	0.482	0.511581	0.5606	0.4891	0.6239	0.469	0.4622	0.55	0.5	0.58	0.44	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.118786	NA	NA	NA	NA	NA	0.478	NA	3.4394
1308	5	137780368	137780368	C	A	intronic	REEP2	NA	NA	NA	intronic	ENSG00000132563	NA	NA	NA	NA	NA	5q31.2	NA	NA	NA	NA	rs2240331	0.58	0.58	0.59	0.57528	0.5606	0.7817	0.464	0.475	0.592	0.56	0.8	0.47	0.46	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.488825	1.488825	NA	NA	NA	NA	0.471	NA	3.4394
1308	2	241813496	241813496	C	T	intronic	AGXT	NA	NA	NA	intronic	ENSG00000172482	NA	NA	NA	NA	NA	2q37.3	NA	NA	NA	NA	rs11693280	0.11	0.11	0.091	0.0820687	0.2058	NA	0.1383	0.0363	0.0613	0.21	NA	0.15	0.05	0.15	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.108695	NA	NA	0.204884	0.061734	NA	0.109	NA	3.439316
1308	7	45139892	45139892	G	A	UTR3	TBRG4	NM_199122:c.*32C>T,NM_004749:c.*32C>T,NM_030900:c.*32C>T,NM_001261834:c.*32C>T	NA	NA	UTR3	ENSG00000136270	ENST00000395655:c.*32C>T,ENST00000361278:c.*32C>T,ENST00000258770:c.*32C>T,ENST00000494076:c.*32C>T	NA	NA	NA	NA	7p13	NA	NA	NA	NA	rs4553	0.35	0.35	0.375	0.401957	0.2734	0.1905	0.2709	0.6989	0.4438	0.27	0.17	0.31	0.72	0.3305	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.366603	NA	NA	0.290233	0.652065	NA	0.406	NA	3.4392004
1308	2	241808792	241808792	C	T	intronic	AGXT	NA	NA	NA	intronic	ENSG00000172482	NA	NA	NA	NA	NA	2q37.3	NA	NA	NA	NA	rs34995778	0.11	0.11	0.1	0.0816693	0.2038	NA	0.134	0.0386	0.0613	0.21	NA	0.14	0.06	0.1531	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.046054	NA	NA	0.20407	0.06355	NA	0.109	NA	3.43903
1308	11	56380008	56380008	C	T	intronic	OR8U8	NA	NA	NA	downstream	ENSG00000255012	NA	NA	NA	NA	NA	11q12.1	NA	NA	NA	NA	rs12292069	0.11	0.11	0.11	0.104433	0.1372	NA	0.0965	0.2133	0.0368	0.14	NA	0.08	0.22	0.1178	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.56502	NA	NA	0.13933	0.21444	NA	0.109	NA	3.4390033
1308	2	71747899	71747899	G	A	intronic	DYSF	NA	NA	NA	intronic	ENSG00000135636	NA	NA	NA	NA	NA	2p13.2	NA	NA	NA	NA	rs12713756	0.38	0.38	0.35	0.367812	0.5537	0.122	0.5086	0.3737	0.3221	0.55	0.09	0.51	0.35	0.4755	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.276452	NA	NA	0.531977	0.42601	NA	0.399	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000080336.1;CLNDSDB=.;CLNDSDBID=.	3.438823
1308	16	20492307	20492307	G	A	intronic	ACSM2A	NA	NA	NA	intronic	ENSG00000183747	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs1700810	0.49	0.49	0.49	0.508986	0.2614	0.7917	0.2781	0.6392	0.4601	0.28	0.8	0.29	0.62	0.2999	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.87409	NA	NA	NA	NA	NA	0.449	NA	3.4387
1308	2	33622448	33622448	T	C	intronic	LTBP1	NA	NA	NA	intronic	ENSG00000049323	NA	NA	NA	NA	NA	2p22.3	NA	NA	NA	NA	rs2367734	0.67	0.67	0.651	0.626797	0.5616	0.8601	0.6124	0.5877	0.5164	0.57	0.89	0.59	0.66	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.333199	1.333199	NA	NA	NA	NA	0.638	NA	3.4384
1308	3	9859198	9859198	G	A	intronic	ARPC4-TTLL3,TTLL3	NA	NA	NA	intronic	ENSG00000214021,ENSG00000250151	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs11131190	0.32	0.32	0.313	0.265575	0.5616	0.1498	0.3012	0.1278	0.2413	0.57	0.15	0.34	0.13	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.07739	NA	NA	NA	NA	NA	0.413	NA	3.4384
1308	3	45784963	45784963	T	C	intronic	SACM1L	NA	NA	NA	intronic	ENSG00000211456	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs9821974	0.37	0.37	0.325	0.316693	0.5616	0.2242	0.428	0.1702	0.2791	0.58	0.2	0.46	0.18	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.566493	1.566493	NA	NA	NA	NA	0.362	NA	3.4384
1308	4	58969418	58969418	A	G	intergenic	LOC255130,NONE	dist=897953;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000248660	NA	NA	NA	NA	NA	4q12	NA	NA	NA	NA	rs2611174	0.52	0.52	0.473	0.514577	0.5616	0.4891	0.6239	0.4796	0.4622	0.55	0.5	0.58	0.45	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.31057	NA	NA	NA	NA	NA	0.486	NA	3.4384
1308	10	26356066	26356066	C	T	intronic	MYO3A	NA	NA	NA	intronic	ENSG00000095777	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs3824695	0.4	0.4	0.386	0.396565	0.5616	0.2956	0.3516	0.3124	0.4765	0.57	0.29	0.34	0.3	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.34864	NA	NA	NA	NA	NA	0.435	NA	3.4384
1308	10	26357625	26357625	T	C	intronic	MYO3A	NA	NA	NA	intronic	ENSG00000095777	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs3817421	0.4	0.4	0.406	0.396565	0.5616	0.2956	0.3516	0.3124	0.4765	0.57	0.29	0.34	0.3	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.517901	1.517901	NA	NA	NA	NA	0.457	NA	3.4384
1308	14	106376385	106376385	G	A	intergenic	ELK2AP,KIAA0125	dist=237241;dist=7453	NA	NA	upstream	ENSG00000228131,ENSG00000237197	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs3794477	0.2	0.2	0.198	0.229433	0.0616	0.3095	0.1513	0.4259	0.1094	0.06	0.27	0.18	0.36	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.257459	NA	NA	NA	NA	NA	0.058	NA	3.4384
1308	17	64049733	64049733	A	G	intronic	CEP112	NA	NA	NA	intronic	ENSG00000154240	NA	NA	NA	NA	NA	17q24.1	NA	NA	NA	NA	rs1401049	0.44	0.44	0.463	0.439497	0.5616	0.125	0.3314	0.6868	0.3804	0.56	0.13	0.36	0.68	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.241635	3.241635	NA	NA	NA	NA	0.507	NA	3.4384
1308	17	64050062	64050062	G	A	intronic	CEP112	NA	NA	NA	intronic	ENSG00000154240	NA	NA	NA	NA	NA	17q24.1	NA	NA	NA	NA	rs1401048	0.44	0.44	0.463	0.439097	0.5616	0.125	0.3314	0.6853	0.3804	0.56	0.13	0.36	0.68	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.488041	NA	NA	NA	NA	NA	0.486	NA	3.4384
1308	19	39976734	39976734	G	A	intronic	TIMM50	NA	NA	NA	intronic	ENSG00000105197	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs4803247	0.6	0.6	0.611	0.639377	0.5616	0.5734	0.5331	0.7995	0.6462	0.56	0.51	0.55	0.78	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.791698	NA	NA	NA	NA	NA	0.536	NA	3.4384
1308	10	99655606	99655606	G	C	intronic	CRTAC1	NA	NA	NA	intronic	ENSG00000095713	NA	NA	NA	NA	NA	10q24.2	NA	NA	NA	NA	rs2297938	0.16	0.16	0.147	0.166933	0.1928	0.12	0.1311	0.1808	0.1953	0.19	0.1	0.15	0.19	0.1732	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.393146	NA	NA	0.195698	0.170222	NA	0.159	NA	3.438302
1308	19	53995004	53995004	G	A	exonic	ZNF813	NA	synonymous SNV	ZNF813:NM_001004301:exon4:c.G1518A:p.R506R	exonic	ENSG00000198346	NA	synonymous SNV	ENSG00000198346:ENST00000396403:exon4:c.G1518A:p.R506R	NA	NA	19q13.42	NA	NA	NA	NA	rs2708845	0.76	0.76	0.769	0.782947	0.7485	0.6498	0.8084	0.9304	0.7382	0.73	0.64	0.8	0.91	0.7483	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.469203	NA	NA	0.731565	0.897908	NA	0.819	NA	3.4383016
1308	6	43646401	43646401	A	G	intronic	MRPS18A	NA	NA	NA	intronic	ENSG00000096080	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs2295948	0.32	0.32	0.329	0.355431	0.16	0.3988	0.1686	0.5378	0.3978	0.16	0.41	0.17	0.57	0.2442	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.724031	NA	NA	0.157558	0.460735	ID=COSN167775;OCCURENCE=1(large_intestine)	0.29	NA	3.438242
1308	5	169812303	169812303	G	A	intronic	KCNIP1,KCNMB1	NA	NA	NA	intronic	ENSG00000145936,ENSG00000182132	NA	NA	NA	NA	NA	5q35.1	NA	NA	NA	NA	rs2071156	0.21	0.21	0.204	0.240615	0.17	0.2192	0.2061	0.2753	0.3129	0.17	0.25	0.19	0.22	0.2043	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.68817	NA	NA	0.188023	0.259419	NA	0.116	NA	3.437677
1308	6	153315617	153315617	G	A	intronic	MTRF1L	NA	NA	NA	intronic	ENSG00000112031	NA	NA	NA	NA	NA	6q25.2	NA	NA	NA	NA	rs3799135	0.2	0.2	0.17	0.236821	0.162	0.1498	0.3026	0.2663	0.317	0.16	0.13	0.3	0.28	0.2213	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.143548	NA	NA	0.179186	0.247844	ID=COSN167914;OCCURENCE=1(large_intestine)	0.225	NA	3.437514
1308	1	183072908	183072908	T	C	intronic	LAMC1	NA	NA	NA	intronic	ENSG00000135862	NA	NA	NA	NA	NA	1q25.3	NA	NA	NA	NA	rs10797835	0.53	0.53	0.496	0.53135	0.5626	0.628	0.6254	0.3321	0.6022	0.57	0.58	0.58	0.38	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.204253	NA	NA	NA	NA	NA	0.464	NA	3.4374
1308	3	42218095	42218095	G	C	intronic	TRAK1	NA	NA	NA	intronic	ENSG00000182606	NA	NA	NA	NA	NA	3p22.1	NA	NA	NA	NA	rs1010987	0.7	0.7	0.69	0.658347	0.5626	0.9454	0.7378	0.5613	0.5358	0.55	0.97	0.7	0.62	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.822803	NA	NA	NA	NA	NA	0.623	NA	3.4374
1308	4	8608934	8608934	C	T	intronic	CPZ	NA	NA	NA	intronic	ENSG00000109625,ENSG00000155269	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs2302579	0.59	0.59	0.594	0.596246	0.5626	0.62	0.6744	0.5038	0.6759	0.56	0.63	0.65	0.53	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.150299	NA	NA	NA	NA	NA	0.529	NA	3.4374
1308	4	165850806	165850806	A	G	intergenic	LOC100506013,TRIM61	dist=32130;dist=24792	NA	NA	ncRNA_exonic	ENSG00000221891	NA	NA	NA	NA	NA	4q32.3	NA	NA	NA	NA	rs5027301	0.63	0.63	0.6	0.659345	0.5626	0.755	0.647	0.6445	0.6892	0.56	0.71	0.64	0.63	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.590747	NA	NA	NA	NA	NA	0.667	NA	3.4374
1308	10	94967076	94967076	A	G	intergenic	CYP26A1,MYOF	dist=129435;dist=99110	NA	NA	ncRNA_exonic	ENSG00000237417	NA	NA	NA	NA	NA	10q23.33	NA	NA	NA	NA	rs7070947	0.38	0.38	0.398	0.388578	0.5626	0.0526	0.4107	0.5159	0.3681	0.55	0.06	0.44	0.46	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.507966	NA	NA	NA	NA	NA	0.355	NA	3.4374
1308	11	403484	403484	G	C	intronic	PKP3	NA	NA	NA	intronic	ENSG00000184363	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs74045276	0.44	0.44	0.355	0.449081	0.5626	0.3571	0.5965	0.298	0.5266	0.55	0.35	0.56	0.28	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.18222	NA	NA	NA	NA	NA	0.319	NA	3.4374
1308	11	64326795	64326795	A	G	intronic	SLC22A11	NA	NA	NA	intronic	ENSG00000168065	NA	NA	NA	NA	NA	11q13.1	NA	NA	NA	NA	rs2277312	0.44	0.44	0.437	0.453075	0.5626	0.0655	0.3501	0.7905	0.3569	0.55	0.07	0.38	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.563716	NA	NA	NA	NA	NA	0.645	NA	3.4374
1308	14	34396100	34396100	C	T	intronic	EGLN3	NA	NA	NA	intronic	ENSG00000129521	NA	NA	NA	NA	NA	14q13.1	NA	NA	NA	NA	rs10137361	0.59	0.59	0.539	0.617612	0.5626	0.6696	0.7118	0.4728	0.7495	0.55	0.67	0.67	0.48	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.014766	NA	NA	NA	NA	NA	0.442	NA	3.4374
1308	16	5143647	5143647	A	G	intronic	FAM86A	NA	NA	NA	intronic	ENSG00000118894	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs35736978	0.47	0.47	0.324	0.504992	0.5626	0.4554	0.5288	0.3449	0.6963	0.57	0.45	0.52	0.32	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.391961	NA	NA	NA	NA	NA	0.138	NA	3.4374
1308	17	2604375	2604375	C	T	intronic	CLUH	NA	NA	NA	intronic	ENSG00000132361	NA	NA	NA	NA	NA	17p13.3	NA	NA	NA	NA	rs758417	0.48	0.48	0.465	0.446685	0.5626	0.5228	0.6182	0.1452	0.5348	0.57	0.54	0.61	0.15	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.393073	NA	NA	NA	NA	NA	0.42	NA	3.4374
1308	19	33110047	33110047	T	C	intronic	ANKRD27	NA	NA	NA	intronic	ENSG00000105186	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs28505804	0.46	0.46	0.457	0.459465	0.5626	0.2877	0.3775	0.5144	0.5143	0.58	0.28	0.43	0.51	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.065996	NA	NA	NA	NA	NA	0.478	NA	3.4374
1308	19	33110058	33110058	A	C	intronic	ANKRD27	NA	NA	NA	intronic	ENSG00000105186	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs34727912	0.46	0.46	0.456	0.459265	0.5626	0.2877	0.3775	0.5136	0.5143	0.57	0.28	0.43	0.51	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.848813	NA	NA	NA	NA	NA	0.522	NA	3.4374
1308	19	33131112	33131112	G	A	intronic	ANKRD27	NA	NA	NA	intronic	ENSG00000105186	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs3760943	0.35	0.35	0.099	0.305911	0.5626	0.2331	0.3934	0.0477	0.4039	0.57	0.26	0.42	0.05	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.72751	NA	NA	NA	NA	NA	0.348	NA	3.4374
1308	12	64838922	64838922	G	T	intronic	XPOT	NA	NA	NA	intronic	ENSG00000184575	NA	NA	NA	Score=582;Name=lod=310	NA	12q14.2	NA	NA	NA	NA	rs6581565	0.4	0.4	0.331	0.34984	0.5408	0.3046	0.4769	0.1528	0.3763	0.54	0.34	0.51	0.2	0.4646	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.519303	3.519303	NA	0.557442	0.19882	NA	0.493	NA	3.437158
1308	X	299635	299635	C	T	intronic	PPP2R3B	NA	NA	NA	intronic	ENSG00000167393	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs6655399	0.24	0.24	0.24483	NA	NA	NA	NA	NA	NA	0.31	0.23	0.24	0.15	0.2631	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.320029	NA	NA	0.299767	0.197225	NA	0.181	NA	3.437133
1308	19	40407901	40407901	G	A	intronic	FCGBP	NA	NA	NA	intronic	ENSG00000090920	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs3901397	0.1	0.1	0.087	0.114217	0.1849	0.0387	0.2017	0.0439	0.1524	0.17	0.03	0.12	0.04	0.177	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.665809	NA	NA	0.200977	0.085111	ID=COSN165814;OCCURENCE=1(NS)	0.109	NA	3.437123
1308	1	183095477	183095477	G	A	intronic	LAMC1	NA	NA	NA	intronic	ENSG00000135862	NA	NA	NA	NA	NA	1q25.3	NA	NA	NA	NA	rs2296293	0.53	0.53	0.514	0.531749	0.5636	0.628	0.6254	0.3321	0.6033	0.57	0.58	0.58	0.38	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.017703	NA	NA	NA	NA	NA	0.464	NA	3.4364
1308	1	183101471	183101471	G	A	intronic	LAMC1	NA	NA	NA	intronic	ENSG00000135862	NA	NA	NA	NA	NA	1q25.3	NA	NA	NA	NA	rs12061219	0.53	0.53	0.509	0.53155	0.5636	0.628	0.6254	0.3321	0.6022	0.57	0.58	0.58	0.38	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.922551	NA	NA	NA	NA	NA	0.435	NA	3.4364
1308	3	52555316	52555316	G	A	intronic	STAB1	NA	NA	NA	intronic	ENSG00000010327	NA	NA	NA	NA	NA	3p21.1	NA	NA	NA	NA	rs13081028	0.59	0.59	0.612	0.545527	0.5636	0.4633	0.6455	0.7005	0.3313	0.57	0.52	0.66	0.67	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.304351	NA	NA	NA	NA	NA	0.565	NA	3.4364
1308	8	2024446	2024446	C	T	intronic	MYOM2	NA	NA	NA	intronic	ENSG00000036448	NA	NA	NA	NA	NA	8p23.3	NA	NA	NA	NA	rs3817700	0.63	0.63	0.611	0.640176	0.5636	0.5813	0.598	0.8865	0.4765	0.54	0.6	0.55	0.85	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.295331	NA	NA	NA	NA	NA	0.13	NA	3.4364
1308	12	29485449	29485449	G	A	intronic	FAR2	NA	NA	NA	intronic	ENSG00000064763	NA	NA	NA	NA	NA	12p11.22	NA	NA	NA	NA	rs10743656	0.64	0.64	0.678	0.666534	0.5636	0.6964	0.4712	0.8616	0.6166	0.57	0.67	0.45	0.86	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.277539	NA	NA	NA	NA	NA	0.623	NA	3.4364
1308	15	90172133	90172133	C	G	intronic	KIF7	NA	NA	NA	intronic	ENSG00000140534,ENSG00000166813	NA	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs12914042	0.45	0.45	0.477	0.423323	0.5636	0.3333	0.4438	0.3404	0.4693	0.57	0.37	0.49	0.35	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.52054	NA	NA	NA	NA	ID=COSN165043;OCCURENCE=1(breast)	0.471	NA	3.4364
1308	15	94368497	94368497	G	C	intergenic	RGMA,MCTP2	dist=736054;dist=472933	NA	NA	ncRNA_intronic	ENSG00000258754	NA	NA	NA	NA	NA	15q26.2	NA	NA	NA	NA	rs6416595	0.58	0.58	0.581	0.582468	0.5636	0.4375	0.5216	0.8011	0.499	0.56	0.46	0.52	0.81	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.49623	NA	NA	NA	NA	NA	0.725	NA	3.4364
1308	16	58296172	58296172	C	T	intronic	CCDC113	NA	NA	NA	intronic	ENSG00000103021	NA	NA	NA	NA	NA	16q21	NA	NA	NA	NA	rs11076237	0.51	0.51	0.51	0.508187	0.5636	0.3948	0.3761	0.6415	0.4816	0.57	0.38	0.44	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.073138	NA	NA	NA	NA	NA	0.529	NA	3.4364
1308	19	54872349	54872349	G	A	intronic	LAIR1	NA	NA	NA	intronic	ENSG00000167613	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs3745444	0.41	0.41	0.376	0.382788	0.5636	0.3819	0.3746	0.1967	0.455	0.55	0.4	0.39	0.22	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.157356	NA	NA	NA	NA	NA	NA	NA	3.4364
1308	15	84488529	84488529	T	C	intronic	ADAMTSL3	NA	NA	NA	intronic	ENSG00000156218	NA	NA	NA	NA	NA	15q25.2	NA	NA	NA	NA	rs4583200	0.11	0.11	0.094	0.0954473	0.1968	0.0308	0.1513	0.0129	0.1299	0.2	0.03	0.17	0.02	0.163	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.567454	NA	NA	0.203837	0.038811	NA	0.072	NA	3.436363
1308	16	84495761	84495761	G	C	intronic	ATP2C2	NA	NA	NA	ncRNA_exonic	ENSG00000261286	NA	NA	NA	NA	NA	16q24.1	NA	NA	NA	NA	rs34205686	0.18	0.18	0.174	0.151558	0.3072	0.1042	0.2349	0.0348	0.1391	0.3	0.11	0.23	0.04	0.2616	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.020333	NA	NA	0.328475	0.063646	NA	0.167	NA	3.4360583
1308	2	74902872	74902872	A	G	intronic	SEMA4F	NA	NA	NA	intronic	ENSG00000135622	NA	NA	NA	NA	NA	2p13.1	NA	NA	NA	NA	rs363609	0.5	0.5	0.529	0.530751	0.1471	0.8204	0.3127	0.8517	0.3476	0.14	0.82	0.27	0.84	0.2763	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.664004	NA	NA	0.140698	0.751475	NA	0.42	NA	3.435902
1308	17	49156907	49156907	A	G	intronic	SPAG9	NA	NA	NA	ncRNA_intronic	ENSG00000249870	NA	NA	NA	NA	NA	17q21.33	NA	NA	NA	NA	rs8081821	0.29	0.29	0.278	0.279353	0.2922	0.2341	0.3573	0.2965	0.2342	0.28	0.23	0.36	0.32	0.3075	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.044856	NA	NA	0.297791	0.32433	ID=COSN165465;OCCURENCE=1(breast)	0.304	NA	3.4358423
1308	1	248402758	248402758	C	T	exonic	OR2M4	NA	synonymous SNV	OR2M4:NM_017504:exon1:c.C528T:p.H176H	exonic	ENSG00000171180	NA	synonymous SNV	ENSG00000171180:ENST00000306687:exon1:c.C528T:p.H176H	NA	NA	1q44	NA	NA	NA	NA	rs6666148	0.68	0.68	0.639	0.702875	0.7346	0.7966	0.7522	0.4266	0.9121	0.75	0.79	0.7	0.43	0.7488	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.145927	NA	NA	0.747442	0.500908	NA	0.63	NA	3.4358246
1308	19	59058693	59058693	G	A	intronic	TRIM28	NA	NA	NA	intronic	ENSG00000130726	NA	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs3816329	0.17	0.17	0.205	0.18131	0.2167	0.0546	0.1801	0.2443	0.1912	0.2	0.06	0.17	0.24	0.1758	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.685437	1.685437	NA	0.17186	0.239219	NA	0.268	NA	3.43564
1308	7	88847453	88847453	G	T	intronic	ZNF804B	NA	NA	NA	intronic	ENSG00000182348	NA	NA	NA	NA	NA	7q21.13	NA	NA	NA	NA	rs4140974	NA	NA	NA	0.273562	0.2952	0.122	0.2147	0.3487	0.3476	NA	NA	NA	NA	0.2694	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.365526	NA	NA	NA	NA	NA	NA	NA	3.4354
1308	10	3154534	3154534	A	G	intronic	PFKP	NA	NA	NA	intronic	ENSG00000067057	NA	NA	NA	NA	NA	10p15.2	NA	NA	NA	NA	rs2306304	0.49	0.49	0.474	0.446685	0.5646	0.4018	0.4597	0.438	0.3742	0.59	0.38	0.5	0.46	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.332114	NA	NA	NA	NA	NA	0.551	NA	3.4354
1308	11	130416832	130416832	T	G	intergenic	ADAMTS15,C11orf44	dist=70293;dist=126019	NA	NA	ncRNA_exonic	ENSG00000236616	NA	NA	NA	NA	NA	11q24.3	NA	NA	NA	NA	rs2703752	0.61	0.61	0.62	0.605631	0.5646	0.506	0.5331	0.8283	0.501	0.56	0.53	0.54	0.81	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.220953	NA	NA	NA	NA	NA	0.551	NA	3.4354
1308	12	53040411	53040411	T	C	intronic	KRT2	NA	NA	NA	intronic	ENSG00000172867	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs2232559	0.64	0.64	0.622	0.632388	0.5646	0.8829	0.5548	0.559	0.5982	0.56	0.89	0.57	0.53	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.225019	NA	NA	NA	NA	NA	0.493	NA	3.4354
1308	16	58296542	58296542	T	C	intronic	CCDC113	NA	NA	NA	intronic	ENSG00000103021	NA	NA	NA	NA	NA	16q21	NA	NA	NA	NA	rs9923694	0.51	0.51	0.483	0.508387	0.5646	0.3948	0.3761	0.6415	0.4816	0.57	0.38	0.44	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.143031	NA	NA	NA	NA	NA	0.529	NA	3.4354
1308	17	28417376	28417376	T	C	intronic	EFCAB5	NA	NA	NA	intronic	ENSG00000176927	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs8065059	0.52	0.52	0.537	0.544728	0.5646	0.1806	0.4741	0.916	0.4479	0.55	0.18	0.48	0.91	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.420993	NA	NA	NA	NA	NA	0.449	NA	3.4354
1308	18	47317767	47317767	C	T	intronic	ACAA2	NA	NA	NA	intronic	ENSG00000167315	NA	NA	NA	NA	NA	18q21.1	NA	NA	NA	NA	rs529556	0.46	0.46	0.463	0.438498	0.5646	0.2698	0.3732	0.5673	0.3548	0.55	0.27	0.43	0.57	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.393186	3.393186	NA	NA	NA	NA	0.457	NA	3.4354
1308	7	29944062	29944062	A	T	intronic	WIPF3	NA	NA	NA	UTR3	ENSG00000122574	ENST00000409123:c.*60A>T,ENST00000242140:c.*60A>T	NA	NA	NA	NA	7p14.3	NA	NA	NA	NA	rs4722959	0.69	0.69	0.687	0.707468	0.7316	0.8899	0.732	0.4327	0.8487	0.73	0.85	0.72	0.42	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.742977	NA	NA	NA	NA	NA	0.652	NA	3.4350667
1309	6	42934500	42934500	C	T	intronic	PEX6	NA	NA	NA	intronic	ENSG00000124587	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs2274514	0.48	0.48	0.513	0.49381	0.5447	0.1696	0.428	0.7617	0.4601	0.55	0.19	0.43	0.76	0.491	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.952503	NA	NA	0.529302	0.731502	NA	0.58	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000078568.1;CLNDSDB=.;CLNDSDBID=.	3.434998
1309	9	110249505	110249505	C	T	intronic	KLF4	NA	NA	NA	intronic	ENSG00000136826	NA	NA	NA	NA	NA	9q31.2	NA	NA	NA	NA	rs2236599	0.18	0.18	0.159	0.140176	0.1948	0.2927	0.1758	0.0091	0.0787	0.2	0.27	0.21	0.01	0.1825	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.953835	NA	NA	0.187907	0.036087	NA	0.13	NA	3.434793
1309	3	124462710	124462710	G	C	intronic	UMPS	NA	NA	NA	intronic	ENSG00000114491	NA	NA	NA	NA	NA	3q21.2	NA	NA	NA	NA	rs3772807	0.27	0.27	0.247	0.242812	0.2873	0.3671	0.2781	0.1271	0.2004	0.29	0.33	0.3	0.15	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.137868	NA	NA	0.278001	0.183219	NA	0.167	NA	3.434699
1309	1	116260604	116260604	G	A	intronic	CASQ2	NA	NA	NA	intronic	ENSG00000118729	NA	NA	NA	NA	NA	1p13.1	NA	NA	NA	NA	rs2997742	0.63	0.63	0.625	0.630591	0.5656	0.6706	0.6326	0.6626	0.6115	0.58	0.68	0.64	0.65	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.866262	NA	NA	NA	NA	NA	0.732	NA	3.4344
1309	15	57896311	57896311	T	G	intronic	GCOM1,MYZAP	NA	NA	NA	intronic	ENSG00000137878,ENSG00000255529,ENSG00000263155	NA	NA	NA	NA	NA	15q21.3	NA	NA	NA	NA	rs7163748	0.48	0.48	0.487	0.445088	0.5656	0.4464	0.3977	0.3805	0.4407	0.56	0.47	0.41	0.4	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.177609	NA	NA	NA	NA	NA	0.478	NA	3.4344
1309	15	62239304	62239304	A	T	intronic	VPS13C	NA	NA	NA	intronic	ENSG00000129003	NA	NA	NA	NA	NA	15q22.2	NA	NA	NA	NA	rs7166891	0.64	0.64	0.642	0.674121	0.5656	0.7619	0.585	0.7042	0.7178	0.56	0.75	0.54	0.7	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.41506	NA	NA	NA	NA	NA	0.674	NA	3.4344
1309	18	31312106	31312106	T	C	intronic	ASXL3	NA	NA	NA	intronic	ENSG00000141431	NA	NA	NA	NA	NA	18q12.1	NA	NA	NA	NA	rs10432168	0.78	0.78	0.802	0.798323	0.5656	0.9772	0.7565	0.9818	0.635	0.56	0.98	0.7	0.96	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.553215	NA	NA	NA	NA	NA	0.819	NA	3.4344
1309	19	33695830	33695830	G	A	intronic	LRP3	NA	NA	NA	intronic	ENSG00000130881	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs11666900	0.27	0.27	0.227	0.218051	0.5656	0.0347	0.2853	0.0227	0.2658	0.57	0.03	0.34	0.03	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.172081	NA	NA	NA	NA	NA	0.304	NA	3.4344
1309	19	39976684	39976684	T	C	intronic	TIMM50	NA	NA	NA	intronic	ENSG00000105197	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs4803246	0.6	0.6	0.611	0.640575	0.5656	0.5754	0.5331	0.7995	0.6462	0.57	0.51	0.55	0.78	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.479328	NA	NA	NA	NA	NA	0.536	NA	3.4344
1309	2	86107987	86107987	T	C	intronic	ST3GAL5	NA	NA	NA	intronic	ENSG00000115525	NA	NA	NA	NA	NA	2p11.2	NA	Name=TAL1_(SC-12984)	NA	NA	rs11127009	0.6	0.6	0.604	0.580871	0.505	0.6885	0.6398	0.6324	0.4366	0.52	0.69	0.57	0.62	0.5391	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.347779	NA	NA	0.521597	0.628995	NA	0.449	NA	3.434303
1309	4	160251451	160251451	A	G	intronic	RAPGEF2	NA	NA	NA	intronic	ENSG00000109756	NA	NA	NA	NA	NA	4q32.1	NA	NA	NA	NA	rs56024370	0.19	0.19	0.021	0.230831	0.3757	0.0159	0.2853	0.2065	0.2975	0.34	0.01	0.31	0.09	0.0977	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.831941	NA	NA	0.09233	0.0312	NA	NA	NA	3.43427
1309	12	121603118	121603118	T	C	intronic	P2RX7	NA	NA	NA	intronic	ENSG00000089041	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs507085	0.22	0.22	NA	0.253395	0.2863	0.13	0.1671	0.3389	0.2924	0.27	0.12	0.16	0.31	0.2795	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.696012	NA	NA	NA	NA	NA	0.232	NA	3.4342
1309	12	121603122	121603122	C	A	intronic	P2RX7	NA	NA	NA	intronic	ENSG00000089041	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs654856	0.22	0.22	NA	0.253395	0.2863	0.13	0.1671	0.3389	0.2924	0.27	0.12	0.16	0.32	0.2795	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.211699	NA	NA	NA	NA	NA	0.232	NA	3.4342
1309	2	232389744	232389744	A	G	UTR3	NMUR1	NM_006056:c.*10T>C	NA	NA	UTR3	ENSG00000171596	ENST00000305141:c.*10T>C	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs3752762	0.33	0.33	0.299	0.35004	0.2763	0.5099	0.4207	0.152	0.4785	0.28	0.49	0.41	0.18	0.3418	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.492641	1.492641	NA	0.281163	0.159555	NA	0.319	NA	3.4340704
1309	12	26580814	26580814	T	C	intronic	ITPR2	NA	NA	NA	intronic	ENSG00000123104	NA	NA	NA	NA	NA	12p11.23	NA	NA	NA	NA	rs1818135	0.3	0.3	0.281	0.288938	0.161	0.4117	0.3948	0.2405	0.2843	0.16	0.44	0.39	0.28	0.2511	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.873429	NA	NA	0.154234	0.209167	NA	0.246	NA	3.433666
1309	8	63508416	63508416	G	A	intronic	NKAIN3	NA	NA	NA	intronic	ENSG00000185942	NA	NA	NA	NA	NA	8q12.3	NA	NA	NA	NA	rs10957228	0.44	0.44	0.423	0.415935	0.5666	0.4355	0.5245	0.146	0.5286	0.57	0.43	0.51	0.19	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.66934	NA	NA	NA	NA	NA	0.428	NA	3.4334
1309	12	131498995	131498995	G	A	intronic	GPR133	NA	NA	NA	intronic	ENSG00000111452	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs1195923	0.52	0.52	0.52	0.496206	0.5666	0.7788	0.3674	0.2352	0.5767	0.56	0.82	0.37	0.24	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.368898	NA	NA	NA	NA	NA	0.478	NA	3.4334
1309	15	85438118	85438118	T	G	intronic	SLC28A1	NA	NA	NA	intronic	ENSG00000156222	NA	NA	NA	NA	NA	15q25.3	NA	NA	NA	NA	rs7166433	0.44	0.44	0.334	0.396166	0.5666	0.2192	0.4942	0.4357	0.2802	0.54	0.23	0.5	0.48	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.202527	NA	NA	NA	NA	NA	0.326	NA	3.4334
1309	17	16046845	16046845	A	T	intronic	NCOR1	NA	NA	NA	intronic	ENSG00000141027	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs2285579	0.51	0.51	0.498	0.509984	0.5666	0.2262	0.5245	0.7557	0.4018	0.57	0.21	0.53	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.314835	NA	NA	NA	NA	NA	0.529	NA	3.4334
1309	17	53007655	53007655	T	G	intronic	TOM1L1	NA	NA	NA	intronic	ENSG00000141198	NA	NA	NA	NA	NA	17q22	NA	NA	NA	NA	rs12939352	0.48	0.48	0.464	0.506789	0.5666	0.3601	0.4063	0.5825	0.5654	0.57	0.32	0.45	0.54	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.180455	NA	NA	NA	NA	NA	0.551	NA	3.4334
1309	15	42129168	42129168	A	T	intronic	JMJD7,JMJD7-PLA2G4B	NA	NA	NA	intronic	ENSG00000168970,ENSG00000243789	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs7165230	0.21	0.21	0.23	0.223043	0.1829	0.122	0.1744	0.3593	0.2188	0.18	0.13	0.19	0.39	0.1949	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.585337	NA	NA	0.189001	0.324936	NA	0.29	NA	3.433199
1309	19	52002493	52002493	T	A	intronic	SIGLEC12	NA	NA	NA	intronic	ENSG00000254521	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs59372820	0.17	0.17	0.168	0.16234	0.2028	0.0437	0.1254	0.2799	0.1104	0.19	0.05	0.14	0.29	0.1738	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.792497	NA	NA	0.190465	0.252837	ID=COSN165895;OCCURENCE=1(breast)	0.283	NA	3.432935
1309	1	58946861	58946861	T	G	intronic	OMA1	NA	NA	NA	intronic	ENSG00000162600	NA	NA	NA	NA	NA	1p32.2	NA	NA	NA	NA	rs12144759	0.16	0.16	0.179	0.151358	0.1819	0.0486	0.111	0.2307	0.1472	0.19	0.06	0.11	0.25	0.2064	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.77106	NA	NA	0.178831	0.231098	NA	0.203	NA	3.432869
1309	1	111661528	111661528	T	C	intronic	DRAM2	NA	NA	NA	intronic	ENSG00000156171	NA	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	rs325917	0.28	0.28	0.274	0.328474	0.1521	0.2808	0.2536	0.4682	0.4233	0.14	0.3	0.25	0.47	0.2599	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.970879	NA	NA	0.155465	0.412767	NA	0.355	NA	3.432535
1309	4	108935770	108935770	T	C	intronic	HADH	NA	NA	NA	intronic	ENSG00000138796	NA	NA	NA	NA	NA	4q25	NA	NA	NA	NA	rs7677408	0.73	0.73	0.74	NA	NA	NA	NA	NA	NA	0.76	0.71	0.83	0.64	0.5675	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.314854	NA	NA	NA	NA	NA	0.812	NA	3.4325
1309	16	1691106	1691106	T	C	intronic	CRAMP1L	NA	NA	NA	intronic	ENSG00000007545,ENSG00000261732	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs2072986	0.41	0.41	0.424	0.447484	0.1471	0.5903	0.3242	0.6997	0.3558	0.14	0.59	0.3	0.69	0.2742	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.199619	NA	NA	0.146229	0.611111	NA	0.355	NA	3.432471
1309	4	10027643	10027643	A	G	intronic	SLC2A9	NA	NA	NA	intronic	ENSG00000109667	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs6449237	0.27	0.27	0.271	0.266973	0.2932	0.0952	0.2161	0.5514	0.0685	0.27	0.09	0.22	0.53	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.040156	NA	NA	0.274356	0.494942	NA	0.326	NA	3.432444
1309	14	106363748	106363748	C	T	intergenic	ELK2AP,KIAA0125	dist=224604;dist=20090	NA	NA	downstream	ENSG00000211918	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs9671626	0.15	0.15	0.03	0.174521	0.0676	0.2044	0.1354	0.2995	0.1125	0.06	0.16	0.14	0.27	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.161721	NA	NA	NA	NA	NA	0.058	NA	3.4324
1309	19	9020211	9020211	C	T	intronic	MUC16	NA	NA	NA	intronic	ENSG00000181143	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs11882373	0.69	0.69	0.689	0.690096	0.5676	0.7242	0.7003	0.8381	0.5736	0.57	0.71	0.66	0.85	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.424518	NA	NA	NA	NA	NA	0.703	NA	3.4324
1309	16	31335906	31335906	T	C	intronic	ITGAM	NA	NA	NA	intronic	ENSG00000169896	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs41476751	0.23	0.23	0.241	0.290535	0.1819	0.0278	0.1643	0.6558	0.2689	0.18	0.0017	0.16	0.64	0.2253	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.110534	NA	NA	0.160416	0.537325	NA	0.261	NA	3.432384
1309	15	63908587	63908587	G	T	intronic	HERC1	NA	NA	NA	intronic	ENSG00000103657	NA	NA	NA	NA	NA	15q22.31	NA	NA	NA	NA	rs62012820	0.1	0.1	0.103	0.0970447	0.2127	0.001	0.1037	0.0053	0.1963	0.23	0.0017	0.13	0.01	0.1611	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.102252	NA	NA	0.194041	0.035208	NA	0.058	NA	3.432159
1309	19	2098015	2098015	T	C	intronic	IZUMO4	NA	NA	NA	intronic	ENSG00000099840	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs7253456	0.22	0.22	0.201	0.254593	0.1889	0.2054	0.2017	0.3003	0.3487	0.17	0.2	0.22	0.3	0.2085	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.064408	NA	NA	0.171086	0.29369	NA	0.167	NA	3.431514
1309	11	65302893	65302893	G	A	intronic	SCYL1	NA	NA	NA	intronic	ENSG00000142186	NA	NA	NA	NA	NA	11q13.1	NA	NA	NA	NA	rs947791	0.18	0.18	0.197	0.146965	0.1948	0.1746	0.1326	0.1354	0.0951	0.19	0.19	0.17	0.15	0.1644	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.463794	NA	NA	0.209374	0.144959	NA	0.145	NA	3.431426
1309	1	32155284	32155284	T	C	intronic	COL16A1	NA	NA	NA	intronic	ENSG00000084636	NA	NA	NA	NA	NA	1p35.2	NA	NA	NA	NA	rs2297682	0.49	0.49	0.492	0.478435	0.5686	0.2302	0.3473	0.7761	0.3323	0.56	0.18	0.4	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.468238	1.468238	NA	NA	NA	NA	0.536	NA	3.4314
1309	1	150999863	150999863	A	G	intronic	PRUNE	NA	NA	NA	intronic	ENSG00000143363	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs55717234	0.42	0.42	0.429	0.48103	0.5686	0.2629	0.3963	0.4592	0.7055	0.58	0.21	0.38	0.45	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.439181	NA	NA	NA	NA	NA	0.609	NA	3.4314
1309	2	70481171	70481171	G	A	intergenic	TIA1,PCYOX1	dist=5392;dist=4060	NA	NA	upstream	ENSG00000231414	NA	NA	NA	NA	NA	2p13.3	NA	NA	NA	NA	rs75670342	0.08	0.08	0.067	0.0734824	0.0686	0.1637	0.0778	0.0303	0.0409	0.07	0.16	0.05	0.03	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.864167	NA	NA	NA	NA	NA	0.072	NA	3.4314
1309	2	71816602	71816602	G	C	intronic	DYSF	NA	NA	NA	intronic	ENSG00000135636	NA	NA	NA	NA	NA	2p13.2	NA	NA	NA	NA	rs3811611	0.64	0.64	0.633	0.604633	0.5686	0.7192	0.598	0.6407	0.4796	0.56	0.75	0.62	0.63	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.824267	NA	NA	NA	NA	NA	0.674	NA	3.4314
1309	4	70284911	70284911	T	A	intergenic	UGT2B28,UGT2B4	dist=124143;dist=60972	NA	NA	ncRNA_intronic	ENSG00000249956	NA	NA	NA	NA	NA	4q13.2	NA	NA	NA	NA	rs2642838	0.49	0.49	0.439	0.478435	0.5686	0.4921	0.5086	0.3548	0.5174	0.57	0.48	0.49	0.36	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.695139	NA	NA	NA	NA	NA	0.196	NA	3.4314
1309	6	168272817	168272817	T	C	intronic	MLLT4	NA	NA	NA	intronic	ENSG00000130396	NA	NA	NA	NA	NA	6q27	NA	NA	NA	NA	rs2073651	0.46	0.46	0.476	0.432308	0.5686	0.2063	0.4308	0.5832	0.3221	0.55	0.22	0.43	0.62	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.282862	NA	NA	NA	NA	NA	0.558	NA	3.4314
1309	7	87174066	87174066	T	C	intronic	ABCB1	NA	NA	NA	intronic	ENSG00000085563	NA	NA	NA	NA	NA	7q21.12	NA	NA	NA	NA	rs2235046	0.56	0.56	0.573	0.557508	0.5686	0.37	0.5879	0.7973	0.3937	0.56	0.35	0.56	0.8	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.596885	NA	NA	NA	NA	ID=COSN168135;OCCURENCE=1(large_intestine)	0.587	NA	3.4314
1309	8	2024437	2024437	C	T	intronic	MYOM2	NA	NA	NA	intronic	ENSG00000036448	NA	NA	NA	NA	NA	8p23.3	NA	NA	NA	NA	rs3817699	0.64	0.64	0.634	0.641573	0.5686	0.5813	0.5994	0.8873	0.4765	0.56	0.61	0.56	0.87	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.437175	NA	NA	NA	NA	NA	0.594	NA	3.4314
1309	10	96967298	96967298	T	G	intronic	C10orf129	NA	NA	NA	intronic	ENSG00000173124	NA	NA	NA	NA	NA	10q23.33	NA	NA	NA	NA	rs815250	0.39	0.39	0.414	0.395966	0.5686	0.0466	0.3862	0.497	0.4489	0.56	0.05	0.45	0.5	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.328967	NA	NA	NA	NA	NA	0.362	NA	3.4314
1309	17	20678899	20678899	G	A	intergenic	LOC100287072,CCDC144NL	dist=37721;dist=87809	NA	NA	upstream	ENSG00000213671	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs111627402	0.03	0.03	0.019	0.0247604	0.0686	NA	0.049	0.0015	0.0194	0.07	NA	0.06	0.0041	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.639598	NA	NA	NA	NA	NA	0.072	NA	3.4314
1309	1	168545949	168545949	G	A	intronic	XCL1	NA	NA	NA	intronic	ENSG00000143184	NA	NA	NA	NA	NA	1q24.2	NA	NA	NA	NA	rs34933908	0.56	0.56	0.57	NA	NA	NA	NA	NA	NA	0.66	0.35	0.54	0.65	0.5688	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.26076	NA	NA	NA	NA	NA	0.304	NA	3.4312
1309	13	48671081	48671081	A	G	intergenic	MED4,ITM2B	dist=1804;dist=136193	NA	NA	intergenic	ENSG00000136146,ENSG00000224510	dist=1814;dist=37413	NA	NA	NA	NA	13q14.2	NA	Name=NANOG_(SC-33759)	Name=15	NA	rs1571256	0.49	0.49	0.479	0.451677	0.662	0.5754	0.5346	0.112	0.5082	0.66	0.54	0.57	0.14	0.5917	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.474144	NA	NA	0.64892	0.21347	NA	0.435	NA	3.4307134
1309	2	90218693	90218693	C	G	intergenic	MIR4436A,LOC654342	dist=1106725;dist=1606016	NA	NA	upstream	ENSG00000253906	NA	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs113047934	0.04	0.04	0.023	0.0375399	0.0696	0.0069	0.0476	0.0053	0.0726	0.08	0.01	0.02	0.01	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.903541	NA	NA	NA	NA	NA	0.014	NA	3.4304
1309	4	70288522	70288522	A	G	intergenic	UGT2B28,UGT2B4	dist=127754;dist=57361	NA	NA	ncRNA_intronic	ENSG00000249956	NA	NA	NA	NA	NA	4q13.2	NA	NA	NA	NA	rs2254718	0.51	0.51	0.473	0.50619	0.5696	0.4861	0.513	0.4599	0.5194	0.57	0.48	0.5	0.45	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.03507	NA	NA	NA	NA	NA	0.449	NA	3.4304
1309	4	85555196	85555196	G	A	intronic	CDS1	NA	NA	NA	intronic	ENSG00000163624	NA	NA	NA	NA	NA	4q21.23	NA	NA	NA	NA	rs13102661	0.51	0.51	0.507	0.533546	0.5696	0.627	0.5576	0.2731	0.7352	0.56	0.62	0.52	0.3	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.01413	NA	NA	NA	NA	NA	0.457	NA	3.4304
1309	16	58571185	58571185	C	T	intronic	CNOT1	NA	NA	NA	intronic	ENSG00000125107	NA	NA	NA	NA	NA	16q21	NA	NA	NA	NA	rs2244453	0.79	0.79	0.814	0.819289	0.5696	0.9712	0.7435	0.9546	0.7904	0.59	0.98	0.71	0.95	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.826983	NA	NA	NA	NA	NA	0.768	NA	3.4304
1309	21	45076373	45076373	A	G	intronic	HSF2BP	NA	NA	NA	intronic	ENSG00000160207	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs2838340	0.53	0.53	0.5	0.516773	0.5696	0.7123	0.5591	0.2489	0.593	0.56	0.69	0.59	0.27	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.662474	NA	NA	NA	NA	NA	0.493	NA	3.4304
1309	8	2050596	2050596	A	G	intronic	MYOM2	NA	NA	NA	intronic	ENSG00000036448	NA	NA	NA	NA	NA	8p23.3	NA	NA	NA	NA	rs2294072	0.28	0.28	0.263	0.25599	0.1859	0.2847	0.232	0.3918	0.1319	0.19	0.3	0.27	0.39	0.2159	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.531618	NA	NA	0.16814	0.360418	NA	0.232	NA	3.43006
1309	10	27065976	27065976	G	A	intronic	ABI1	NA	NA	NA	intronic	ENSG00000136754	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs7096584	0.22	0.22	0.204	0.211462	0.1819	0.1151	0.281	0.3616	0.089	0.18	0.09	0.23	0.4	0.2013	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.894124	NA	NA	0.186744	0.350658	NA	0.275	NA	3.430056
1309	12	71029431	71029431	C	T	intronic	PTPRB	NA	NA	NA	intronic	ENSG00000127329	NA	NA	NA	NA	NA	12q15	NA	NA	NA	NA	rs2717417	0.39	0.39	0.406	0.467652	0.1223	0.5218	0.3977	0.7156	0.4816	0.12	0.52	0.34	0.71	0.2885	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.564015	NA	NA	0.159429	0.605962	NA	0.362	NA	3.429771
1309	9	14770825	14770825	T	C	intronic	FREM1	NA	NA	NA	intronic	ENSG00000164946	NA	NA	NA	NA	NA	9p22.3	NA	NA	NA	NA	rs7860370	0.14	0.14	0.125	0.150958	0.171	0.2212	0.1542	0.0061	0.2515	0.18	0.22	0.13	0.01	0.2159	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.529629	NA	NA	0.183426	0.035751	NA	0.116	NA	3.429674
1309	2	29356728	29356728	T	C	intronic	CLIP4	NA	NA	NA	intronic	ENSG00000115295	NA	NA	NA	NA	NA	2p23.2	NA	NA	NA	NA	rs3768674	0.24	0.24	0.253	0.236022	0.1928	0.249	0.134	0.3737	0.1534	0.2	0.27	0.15	0.33	0.1958	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.347373	3.347373	NA	0.181744	0.317439	NA	0.304	NA	3.429656
1309	1	196967458	196967458	G	T	intronic	CFHR5	NA	NA	NA	intronic	ENSG00000134389	NA	NA	NA	NA	NA	1q31.3	NA	NA	NA	NA	rs1332664	0.3	0.3	0.226	0.30611	0.175	0.6667	0.4265	0.0507	0.3292	0.17	0.65	0.34	0.07	0.2483	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.684486	NA	NA	0.147045	0.055606	NA	0.225	NA	3.429655
1309	7	926077	926077	G	A	intronic	GET4	NA	NA	NA	intronic	ENSG00000164828,ENSG00000239857	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs10267796	0.56	0.56	0.562	0.529952	0.5706	0.5546	0.5937	0.466	0.5041	0.58	0.53	0.58	0.52	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.474744	NA	NA	NA	NA	NA	0.681	NA	3.4294
1309	8	133995475	133995475	A	G	intronic	TG	NA	NA	NA	intronic	ENSG00000042832	NA	NA	NA	NA	NA	8q24.22	NA	NA	NA	NA	rs10105779	0.5	0.5	0.514	0.485224	0.5706	0.1984	0.3991	0.7693	0.3701	0.57	0.22	0.45	0.77	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.321768	NA	NA	NA	NA	NA	0.572	NA	3.4294
1309	9	73250037	73250037	C	T	intronic	TRPM3	NA	NA	NA	intronic	ENSG00000083067	NA	NA	NA	NA	NA	9q21.12	NA	NA	NA	NA	rs4322073	0.41	0.41	0.391	0.392772	0.5706	0.3036	0.4337	0.2126	0.5164	0.56	0.34	0.5	0.21	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.802476	2.802476	NA	NA	NA	NA	0.413	NA	3.4294
1309	19	54783077	54783077	C	G	intronic	LILRB2	NA	NA	NA	intronic	ENSG00000131042	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs7250635	0.31	0.31	0.26	0.340056	0.5706	0.1161	0.379	0.2632	0.41	0.53	0.05	0.38	0.23	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.716091	NA	NA	NA	NA	NA	0.348	NA	3.4294
1309	20	33508588	33508588	G	T	intronic	ACSS2	NA	NA	NA	intronic	ENSG00000131069	NA	NA	NA	NA	NA	20q11.22	NA	NA	NA	NA	rs3746450	0.48	0.48	0.479	0.515176	0.5706	0.4345	0.353	0.4387	0.7597	0.59	0.42	0.41	0.41	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.015412	NA	NA	NA	NA	NA	0.594	NA	3.4294
1309	10	26356014	26356014	C	T	intronic	MYO3A	NA	NA	NA	intronic	ENSG00000095777	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs3824698	0.37	0.37	0.342	0.396565	0.5616	0.2956	0.3516	0.3124	0.4765	0.5	0.28	0.33	0.28	0.4816	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.991185	NA	NA	0.527442	0.34158	NA	NA	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000039020.1;CLNDSDB=.;CLNDSDBID=.	3.429358
1309	1	16388737	16388737	G	A	intronic	FAM131C	NA	NA	NA	intronic	ENSG00000185519	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs3978468	0.25	0.25	0.21	NA	NA	NA	NA	NA	NA	0.3	0.01	0.39	0.35	0.2895	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.319253	NA	NA	0.281295	0.307953	NA	0.022	NA	3.429205
1309	14	88407917	88407917	G	A	intronic	GALC	NA	NA	NA	intronic	ENSG00000054983	NA	NA	NA	NA	NA	14q31.3	NA	NA	NA	NA	rs12432149	0.51	0.51	0.46	0.488818	0.5119	0.6994	0.6052	0.1808	0.5818	0.53	0.72	0.59	0.18	0.5413	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.500104	NA	NA	0.517831	0.239024	NA	0.507	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000078193.1;CLNDSDB=.;CLNDSDBID=.	3.428969
1309	4	15717321	15717321	G	A	intronic	BST1	NA	NA	NA	intronic	ENSG00000109743	NA	NA	NA	Score=451;Name=lod=91	NA	4p15.32	NA	NA	NA	NA	rs3213710	0.44	0.44	0.423	0.44349	0.5308	0.4266	0.5749	0.2315	0.5644	0.54	0.43	0.53	0.25	0.5174	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.23843	2.23843	NA	0.523029	0.27054	NA	0.413	NA	3.428771
1309	17	78938011	78938011	C	A	intronic	RPTOR	NA	NA	NA	intronic	ENSG00000141564	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs3751937	0.18	0.18	0.154	0.18131	0.2078	0.1766	0.1931	0.1354	0.2127	0.2	0.16	0.2	0.15	0.18	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.173252	NA	NA	0.183605	0.167652	NA	0.174	NA	3.428595
1309	12	133433240	133433240	C	T	intronic	CHFR	NA	NA	NA	intronic	ENSG00000072609	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs11147110	0.14	0.14	0.114	0.143371	0.2008	0.1171	0.255	0.0098	0.2127	0.21	0.1	0.24	0.01	0.1892	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.591479	NA	NA	0.181512	0.043804	ID=COSN164420;OCCURENCE=1(breast)	0.072	NA	3.428488
1309	4	99966568	99966568	G	C	intronic	METAP1	NA	NA	NA	intronic	ENSG00000164024	NA	NA	NA	NA	NA	4q23	NA	NA	NA	NA	rs11721765	0.37	0.37	0.361	0.411542	0.5716	0.1815	0.4107	0.2784	0.6646	0.57	0.16	0.45	0.27	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.878467	NA	NA	NA	NA	NA	0.348	NA	3.4284
1309	16	70732483	70732483	G	A	intronic	VAC14	NA	NA	NA	intronic	ENSG00000103043	NA	NA	NA	NA	NA	16q22.1	NA	NA	NA	NA	rs7201952	0.33	0.33	0.301	0.273762	0.5716	0.1379	0.4654	0.0333	0.2965	0.6	0.13	0.46	0.04	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.793881	NA	NA	NA	NA	ID=COSN165248;OCCURENCE=1(breast)	0.275	NA	3.4284
1309	17	15909728	15909728	A	G	intronic	TTC19	NA	NA	NA	intronic	ENSG00000011295	NA	NA	NA	NA	NA	17p12	NA	NA	NA	NA	rs3760297	0.51	0.51	0.505	0.534545	0.5716	0.2748	0.5216	0.7005	0.5491	0.57	0.25	0.52	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.790109	NA	NA	NA	NA	ID=COSN165344;OCCURENCE=1(breast)	0.486	NA	3.4284
1309	20	5283256	5283256	C	G	exonic	PROKR2	NA	synonymous SNV	PROKR2:NM_144773:exon2:c.G585C:p.T195T	exonic	ENSG00000101292	NA	synonymous SNV	ENSG00000101292:ENST00000217270:exon2:c.G585C:p.T195T,ENSG00000101292:ENST00000546004:exon3:c.G585C:p.T195T	NA	NA	20p12.3	NA	NA	NA	NA	rs3746682	0.73	0.73	0.724	0.723243	0.7505	0.6627	0.745	0.705	0.7669	0.76	0.64	0.77	0.74	0.7435	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.021193	NA	NA	0.744302	0.716977	NA	0.652	NA	3.4283646
1309	19	376008	376008	C	T	UTR5	THEG	NM_199202:c.-38G>A,NM_016585:c.-38G>A	NA	NA	UTR5	ENSG00000105549	ENST00000342640:c.-38G>A	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs1549697	0.32	0.32	0.334	0.370807	0.3062	0.1399	0.2608	0.621	0.4151	0.29	0.16	0.3	0.58	0.3137	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.370687	NA	NA	0.285265	0.559159	NA	0.457	NA	3.4281684
1309	1	1900339	1900339	A	G	intronic	KIAA1751	NA	NA	NA	intergenic	ENSG00000142609,ENSG00000142609	dist=2374;dist=19062	NA	NA	NA	NA	1p36.33	NA	NA	NA	NA	rs56126097	0.22	0.22	0.155	0.180511	0.2386	0.2718	0.1974	0.0991	0.1247	0.24	0.3	0.21	0.1	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.022238	NA	NA	NA	NA	NA	0.217	NA	3.4280667
1309	19	52471813	52471813	T	C	intronic	ZNF350	NA	NA	NA	ncRNA_intronic	ENSG00000269235	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs2278419	0.38	0.38	0.395	0.458067	0.2962	0.2966	0.3012	0.677	0.6063	0.31	0.27	0.33	0.67	0.3441	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.154127	NA	NA	0.265	0.624376	NA	0.384	NA	3.4280333
1309	12	10599270	10599270	G	A	intronic	KLRC1	NA	NA	NA	intronic	ENSG00000134545	NA	NA	NA	NA	NA	12p13.2	NA	NA	NA	NA	rs7314384	0.25	0.25	0.252	0.263578	0.1779	0.2212	0.1599	0.5257	0.1145	0.18	0.19	0.19	0.48	0.2008	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.778999	NA	NA	0.193417	0.480027	NA	0.203	NA	3.427883
1309	17	3424220	3424220	A	G	intronic	TRPV3	NA	NA	NA	intronic	ENSG00000167723	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs72634011	0.28	0.28	0.248	0.265775	0.1839	0.5823	0.2867	0.0386	0.316	0.2	0.61	0.25	0.04	0.2217	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.015159	3.015159	NA	0.16655	0.065742	NA	0.036	NA	3.42785
1309	6	31106177	31106177	T	C	intronic	PSORS1C1,PSORS1C2	NA	NA	NA	UTR5	ENSG00000204540	ENST00000547221:c.-357T>C,ENST00000481450:c.-1263T>C	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs1265098	0.21	0.21	0.161	0.187899	0.2694	0.1399	0.2176	0.1725	0.1534	0.27	0.13	0.25	0.16	0.2258	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.002532	NA	NA	0.243817	0.174172	NA	0.217	NA	3.4276497
1309	3	155829377	155829377	T	C	intergenic	GMPS,KCNAB1	dist=173857;dist=8960	NA	NA	ncRNA_exonic	ENSG00000242537	NA	NA	NA	NA	NA	3q25.31	NA	NA	NA	NA	rs1488426	0.53	0.53	0.468	0.474441	0.5726	0.7113	0.7061	0.112	0.455	0.57	0.73	0.67	0.14	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.086359	NA	NA	NA	NA	NA	0.507	NA	3.4274
1309	5	42893019	42893019	T	C	intergenic	SEPP1,LOC648987	dist=80995;dist=121812	NA	NA	upstream	ENSG00000249092	NA	NA	NA	NA	NA	5p12	NA	NA	NA	NA	rs72759059	0.06	0.06	0.053	0.057508	0.0726	0.006	0.072	0.093	0.0368	0.07	0.0035	0.09	0.08	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.103134	NA	NA	NA	NA	NA	0.08	NA	3.4274
1309	15	31357138	31357138	A	G	intronic	TRPM1	NA	NA	NA	intronic	ENSG00000134160	NA	NA	NA	NA	NA	15q13.3	NA	NA	NA	NA	rs919001	0.63	0.63	0.605	0.578275	0.5726	0.7956	0.5159	0.531	0.4683	0.58	0.84	0.51	0.53	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.434359	NA	NA	NA	NA	NA	0.543	NA	3.4274
1309	16	75448659	75448659	A	G	intronic	CFDP1	NA	NA	NA	intronic	ENSG00000153774,ENSG00000261717	NA	NA	NA	NA	NA	16q23.1	NA	NA	NA	NA	rs8051407	0.52	0.52	0.487	0.497604	0.5726	0.5456	0.6729	0.3147	0.4939	0.57	0.53	0.62	0.37	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.783016	1.783016	NA	NA	NA	NA	0.449	NA	3.4274
1309	18	43329590	43329590	T	G	intronic	SLC14A1	NA	NA	NA	intronic	ENSG00000141469	NA	NA	NA	NA	NA	18q12.3	NA	NA	NA	NA	rs3745006	0.46	0.46	0.431	0.423722	0.5726	0.5069	0.4813	0.2322	0.4029	0.57	0.5	0.48	0.25	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.52377	NA	NA	NA	NA	NA	0.428	NA	3.4274
1309	2	113887294	113887294	G	C	intronic	IL1RN	NA	NA	NA	intronic	ENSG00000136689	NA	NA	NA	NA	NA	2q13	NA	NA	NA	NA	rs495282	0.18	0.18	0.148	0.191693	0.2922	0.0942	0.3314	0.0333	0.3037	0.29	0.08	0.33	0.04	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.042017	NA	NA	0.280641	0.060694	NA	0.246	NA	3.427159
1309	14	20764031	20764031	C	T	intronic	TTC5	NA	NA	NA	intronic	ENSG00000136319	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs4981148	0.12	0.12	0.098	0.121006	0.1899	0.1091	0.0879	0.031	0.2076	0.19	0.1	0.11	0.03	0.1753	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.17016	NA	NA	0.207791	0.055833	NA	0.116	NA	3.427009
1309	19	10080410	10080410	C	G	intronic	COL5A3	NA	NA	NA	intronic	ENSG00000080573	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs2277965	0.16	0.16	0.134	0.136581	0.1809	0.2252	0.1196	0.0393	0.1431	0.18	0.26	0.13	0.03	0.1864	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.885925	1.885925	NA	0.206023	0.07046	NA	0.138	NA	3.426677
1309	10	15263100	15263100	C	T	intronic	FAM171A1	NA	NA	NA	intronic	ENSG00000148468	NA	NA	NA	NA	NA	10p13	NA	NA	NA	NA	rs6602828	0.22	0.22	0.225	0.221645	0.2008	0.37	0.1499	0.174	0.2055	0.2	0.36	0.14	0.15	0.1876	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.130808	2.130808	NA	0.185	0.172719	NA	0.167	NA	3.4266
1309	1	111854223	111854223	C	T	intronic	CHIA	NA	NA	NA	intronic	ENSG00000134216	NA	NA	NA	NA	NA	1p13.2	NA	NA	NA	NA	rs6537695	0.62	0.62	0.576	0.577875	0.5736	0.8442	0.7262	0.3381	0.5266	0.57	0.85	0.68	0.39	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.644617	NA	NA	NA	NA	NA	0.486	NA	3.4264
1309	9	100965472	100965472	C	T	intronic	TBC1D2	NA	NA	NA	intronic	ENSG00000095383	NA	NA	NA	NA	NA	9q22.33	NA	NA	NA	NA	rs3739667	0.64	0.64	0.658	0.633786	0.5736	0.4931	0.5821	0.9062	0.5092	0.57	0.53	0.6	0.9	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.26782	NA	NA	NA	NA	NA	0.565	NA	3.4264
1309	9	132980035	132980035	G	A	intronic	NCS1	NA	NA	NA	intronic	ENSG00000107130	NA	NA	NA	NA	NA	9q34.11	NA	NA	NA	NA	rs2277198	0.57	0.57	0.552	0.594249	0.5736	0.873	0.4164	0.3918	0.728	0.59	0.85	0.4	0.34	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.445919	NA	NA	NA	NA	NA	0.493	NA	3.4264
1309	16	58573946	58573946	C	T	intronic	CNOT1	NA	NA	NA	intronic	ENSG00000125107	NA	NA	NA	NA	NA	16q21	NA	NA	NA	NA	rs246195	0.78	0.78	0.793	0.798522	0.5736	0.9712	0.732	0.879	0.7904	0.59	0.98	0.7	0.87	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.473199	NA	NA	NA	NA	NA	0.768	NA	3.4264
1309	17	26081964	26081964	A	G	intergenic	LGALS9,NOS2	dist=105378;dist=1828	NA	NA	ncRNA_exonic	ENSG00000266786	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs8081248	0.68	0.68	0.692	0.722045	0.5736	0.6687	0.634	0.8374	0.8364	0.57	0.69	0.66	0.86	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.567621	NA	NA	NA	NA	NA	0.855	NA	3.4264
1309	19	14878003	14878003	C	T	intronic	EMR2	NA	NA	NA	intronic	ENSG00000127507	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs7256892	0.6	0.6	0.591	0.580671	0.5736	0.4653	0.6398	0.789	0.3834	0.56	0.48	0.64	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.926152	NA	NA	NA	NA	NA	0.659	NA	3.4264
1309	20	33604042	33604042	T	C	intronic	TRPC4AP	NA	NA	NA	intronic	ENSG00000100991	NA	NA	NA	NA	NA	20q11.22	NA	NA	NA	NA	rs3736802	0.59	0.59	0.566	0.554313	0.5736	0.6786	0.7133	0.472	0.4049	0.57	0.68	0.65	0.46	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.277685	NA	NA	NA	NA	NA	0.399	NA	3.4264
1309	21	31803210	31803210	C	T	downstream	KRTAP13-4	NA	NA	NA	UTR3	ENSG00000186971	ENST00000334068:c.*134C>T	NA	NA	NA	NA	21q22.11	NA	NA	NA	NA	rs1539784	0.52	0.52	0.526	0.550919	0.5736	0.2748	0.6427	0.6452	0.6196	0.55	0.29	0.65	0.66	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.41826	NA	NA	NA	NA	NA	0.638	NA	3.4264
1309	7	1476520	1476520	C	A	intronic	MICALL2	NA	NA	NA	intronic	ENSG00000164877	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs60306276	0.24	0.24	0.234	0.254792	0.1421	0.0288	0.3084	0.562	0.1503	0.14	0.04	0.3	0.57	0.2771	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.049847	NA	NA	0.154601	0.447993	NA	0.21	NA	3.426199
1309	19	47658482	47658482	G	A	intronic	SAE1	NA	NA	NA	intronic	ENSG00000142230	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs11670191	0.22	0.22	0.213	0.210463	0.1938	0.3681	0.2061	0.0968	0.2219	0.19	0.4	0.17	0.09	0.1923	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.276413	NA	NA	0.187791	0.092147	ID=COSN165857;OCCURENCE=1(breast)	0.145	NA	3.426109
1309	11	56510243	56510243	A	G	downstream	OR9G4	NA	NA	NA	downstream	ENSG00000172457	NA	NA	NA	NA	NA	11q12.1	NA	NA	NA	NA	rs11228762	0.41	0.41	0.388	0.438299	0.2406	0.62	0.5086	0.3654	0.5031	0.23	0.61	0.48	0.41	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.88767	NA	NA	NA	NA	NA	0.406	NA	3.4260666
1309	20	6093090	6093090	G	A	intronic	FERMT1	NA	NA	NA	intronic	ENSG00000101311	NA	NA	NA	NA	NA	20p12.3	NA	NA	NA	NA	rs2326719	0.24	0.24	0.225	0.228634	0.1899	0.4692	0.3112	0.0408	0.2157	0.18	0.49	0.28	0.03	0.1984	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.095557	NA	NA	0.185857	0.064458	NA	0.246	NA	3.425843
1309	12	57323388	57323388	C	G	intronic	SDR9C7	NA	NA	NA	intronic	ENSG00000170426	NA	NA	NA	NA	NA	12q13.3	NA	NA	NA	NA	rs7970701	0.29	0.29	0.292	0.293331	0.1889	0.2808	0.2205	0.5227	0.1554	0.2	0.27	0.23	0.48	0.2078	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.026599	NA	NA	0.177558	0.454607	NA	0.254	NA	3.425742
1309	11	5905412	5905412	C	T	upstream	OR52E4	NA	NA	NA	intronic	ENSG00000132256	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs17233457	0.37	0.37	0.348	0.348842	0.4076	0.3631	0.4006	0.2905	0.316	0.42	0.35	0.42	0.26	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.344322	NA	NA	NA	NA	NA	0.355	NA	3.4257333
1309	14	22968797	22968797	G	A	intergenic	OR4E2,DAD1	dist=834559;dist=65010	NA	NA	downstream	ENSG00000211849	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs61272337	0.04	0.04	0.033	0.0453275	0.0348	0.002	0.0461	0.0946	0.0337	0.04	NA	0.05	0.09	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.260567	1.260567	NA	0.039598	0.058526	NA	0.043	NA	3.425602
1309	6	41655814	41655814	G	A	intronic	TFEB	NA	NA	NA	intronic	ENSG00000112561	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs9471626	0.14	0.14	0.129	0.133387	0.1998	0.1835	0.1398	0.0514	0.1196	0.2	0.14	0.15	0.06	0.1698	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.742167	NA	NA	0.204931	0.085565	NA	0.101	NA	3.425469
1309	11	61645967	61645967	C	G	intronic	FADS3	NA	NA	NA	intronic	ENSG00000221968	NA	NA	NA	NA	NA	11q12.2	NA	NA	NA	NA	rs174453	0.22	0.22	0.166	0.232029	0.1829	0.3046	0.4597	0.0582	0.2812	0.18	0.29	0.43	0.07	0.2222	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.563878	NA	NA	0.169458	0.087875	NA	0.181	NA	3.425442
1309	11	3436045	3436045	C	T	intergenic	LOC650368,TRPC2	dist=5667;dist=211645	NA	NA	ncRNA_intronic	ENSG00000166492	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs7118884	0.71	0.71	0.688	0.733027	0.5746	0.9663	0.7147	0.6679	0.7566	0.58	0.97	0.65	0.65	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.898631	NA	NA	NA	NA	NA	0.225	NA	3.4254
1309	2	65559027	65559027	A	G	intronic	SPRED2	NA	NA	NA	intronic	ENSG00000198369	NA	NA	NA	NA	NA	2p14	NA	NA	NA	NA	rs2271198	0.69	0.69	0.703	0.712859	0.5746	0.7817	0.6542	0.8366	0.6585	0.56	0.8	0.61	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.996413	NA	NA	NA	NA	NA	0.768	NA	3.4254
1309	3	183663833	183663833	T	C	intronic	ABCC5	NA	NA	NA	intronic	ENSG00000114770	NA	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs2292998	0.69	0.69	0.709	0.696486	0.5746	0.8532	0.5951	0.8147	0.5726	0.56	0.86	0.57	0.77	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.98502	NA	NA	NA	NA	NA	0.71	NA	3.4254
1309	3	183679532	183679532	A	G	intronic	ABCC5	NA	NA	NA	intronic	ENSG00000114770	NA	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs6443924	0.69	0.69	0.701	0.691494	0.5746	0.8611	0.5951	0.7897	0.5726	0.56	0.86	0.57	0.75	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.151991	NA	NA	NA	NA	NA	0.717	NA	3.4254
1309	11	123599044	123599044	T	C	intronic	ZNF202	NA	NA	NA	intronic	ENSG00000166261	NA	NA	NA	NA	NA	11q24.1	NA	NA	NA	NA	rs675172	0.43	0.43	0.455	0.406749	0.5746	0.2163	0.4265	0.4289	0.3865	0.57	0.26	0.46	0.4	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.889113	NA	NA	NA	NA	NA	0.362	NA	3.4254
1309	20	18608945	18608945	G	C	intronic	DTD1	NA	NA	NA	intronic	ENSG00000125821	NA	NA	NA	NA	NA	20p11.23	NA	NA	NA	NA	rs3818220	0.47	0.47	0.451	0.44389	0.5746	0.3145	0.5014	0.4493	0.3947	0.58	0.32	0.55	0.43	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.276121	NA	NA	NA	NA	NA	0.594	NA	3.4254
1309	21	31803159	31803159	T	C	downstream	KRTAP13-4	NA	NA	NA	UTR3	ENSG00000186971	ENST00000334068:c.*83T>C	NA	NA	NA	NA	21q22.11	NA	NA	NA	NA	rs1539783	0.56	0.56	0.568	0.60024	0.5746	0.2798	0.6571	0.8064	0.638	0.55	0.29	0.66	0.83	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.521837	NA	NA	NA	NA	NA	0.725	NA	3.4254
1309	2	163030336	163030336	T	C	intronic	FAP	NA	NA	NA	intronic	ENSG00000078098	NA	NA	NA	NA	NA	2q24.2	NA	NA	NA	NA	rs3764917	0.17	0.17	0.157	0.211462	0.1928	0.3462	0.1037	0.0083	0.4427	0.18	0.32	0.12	0.01	0.195	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.604793	NA	NA	0.187064	0.037676	ID=COSN166314;OCCURENCE=1(breast),1(lung)	0.217	NA	3.425136
1310	4	68934306	68934306	G	A	ncRNA_intronic	LOC550113	NA	NA	NA	ncRNA_intronic	ENSG00000248049	NA	NA	NA	NA	NA	4q13.2	NA	NA	Name=5	NA	rs10004522	0.64	0.64	0.63	0.634984	0.7296	0.8641	0.5461	0.3638	0.7311	0.72	0.86	0.6	0.31	0.7209	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.389663	NA	NA	0.791279	0.477077	NA	0.514	NA	3.4248876
1310	6	160465753	160465753	T	G	intronic	IGF2R	NA	NA	NA	intronic	ENSG00000197081	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs609207	0.59	0.59	0.567	0.615216	0.5755	0.6865	0.7421	0.4531	0.7117	0.57	0.65	0.71	0.45	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.804903	NA	NA	NA	NA	NA	0.587	NA	3.4245
1310	9	127650321	127650321	G	C	intronic	GOLGA1	NA	NA	NA	intronic	ENSG00000136935	NA	NA	NA	NA	NA	9q33.3	NA	NA	NA	NA	rs754508	0.49	0.49	0.468	0.493011	0.5755	0.381	0.4755	0.4327	0.6176	0.6	0.37	0.51	0.45	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.090568	NA	NA	NA	NA	NA	0.536	NA	3.4245
1310	16	3118849	3118849	C	T	intronic	IL32	NA	NA	NA	intronic	ENSG00000008517	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs12922880	0.46	0.46	0.436	0.458267	0.5755	0.4375	0.4899	0.264	0.5992	0.57	0.46	0.52	0.28	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.488527	NA	NA	NA	NA	NA	0.449	NA	3.4245
1310	10	21157492	21157492	T	C	intronic	NEBL	NA	NA	NA	UTR3	ENSG00000078114	ENST00000377119:c.*89A>G	NA	NA	NA	NA	10p12.31	NA	NA	NA	NA	rs2296609	0.7	0.7	0.722	0.678914	0.7425	0.5169	0.6844	0.792	0.6237	0.75	0.52	0.72	0.83	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.101879	NA	NA	NA	NA	NA	0.703	NA	3.4241667
1310	12	125834395	125834395	T	C	exonic	TMEM132B	NA	synonymous SNV	TMEM132B:NM_052907:exon2:c.T450C:p.S150S	exonic	ENSG00000139364	NA	synonymous SNV	ENSG00000139364:ENST00000299308:exon2:c.T450C:p.S150S	NA	NA	12q24.31	NA	NA	NA	NA	rs3803155	0.67	0.67	0.634	0.661142	0.7435	0.8105	0.8055	0.3154	0.7873	0.73	0.83	0.78	0.32	0.7481	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.340884	NA	NA	0.751193	0.435171	NA	0.659	NA	3.4238736
1310	10	26356015	26356015	A	G	intronic	MYO3A	NA	NA	NA	intronic	ENSG00000095777	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs3824697	0.32	0.32	0.338	0.396565	0.5616	0.2956	0.3516	0.3124	0.4765	0.45	0.26	0.3	0.23	0.4819	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.111978	NA	NA	0.532674	0.347481	NA	NA	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000039021.1;CLNDSDB=.;CLNDSDBID=.	3.423826
1310	4	68928740	68928740	G	A	ncRNA_exonic	LOC550113,SYT14L	NA	NA	NA	ncRNA_exonic	ENSG00000215127,ENSG00000248049	NA	NA	NA	Score=526;Name=lod=183	NA	4q13.2	NA	NA	NA	NA	rs1837215	0.65	0.65	0.641	0.635383	0.7296	0.8651	0.5461	0.3646	0.7311	0.74	0.87	0.6	0.31	0.7214	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.025999	NA	NA	0.791977	0.475715	NA	0.681	NA	3.4236896
1310	3	41759191	41759191	T	C	intronic	ULK4	NA	NA	NA	intronic	ENSG00000168038	NA	NA	NA	NA	NA	3p22.1	NA	NA	NA	NA	rs17060938	0.3	0.3	0.308	0.31849	0.1879	0.1478	0.1758	0.7254	0.18	0.19	0.15	0.17	0.72	0.2143	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.626434	NA	NA	0.174186	0.630624	NA	0.355	NA	3.423614
1310	1	119981612	119981612	C	T	intergenic	HSD3B2,HSD3B1	dist=15950;dist=68214	NA	NA	upstream	ENSG00000203858	NA	NA	NA	NA	NA	1p12	NA	NA	NA	NA	rs10489812	0.14	0.14	0.135	0.160144	0.0765	0.0635	0.1513	0.3162	0.1411	0.07	0.05	0.16	0.32	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.844616	NA	NA	NA	NA	NA	0.196	NA	3.4235
1310	1	119988784	119988784	T	C	intergenic	HSD3B2,HSD3B1	dist=23122;dist=61042	NA	NA	downstream	ENSG00000203858	NA	NA	NA	NA	NA	1p12	NA	NA	NA	NA	rs11801567	0.14	0.14	0.133	0.160144	0.0765	0.0635	0.1513	0.3162	0.1411	0.07	0.05	0.16	0.32	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.440804	NA	NA	NA	NA	NA	0.203	NA	3.4235
1310	1	119988799	119988799	G	C	intergenic	HSD3B2,HSD3B1	dist=23137;dist=61027	NA	NA	downstream	ENSG00000203858	NA	NA	NA	NA	NA	1p12	NA	NA	NA	NA	rs11802702	0.14	0.14	0.136	0.160343	0.0765	0.0635	0.1513	0.3169	0.1411	0.07	0.05	0.16	0.32	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.351776	NA	NA	NA	NA	NA	0.203	NA	3.4235
1310	15	76085413	76085413	A	G	intergenic	MIR4313,UBE2Q2	dist=30757;dist=50209	NA	NA	upstream	ENSG00000261820	NA	NA	NA	NA	NA	15q24.2	NA	NA	NA	NA	rs2089094	0.05	0.05	0.035	0.0421326	0.0765	0.003	0.0461	0.0537	0.0286	0.07	0.0035	0.04	0.05	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.267031	NA	NA	NA	NA	NA	0.08	NA	3.4235
1310	17	7705089	7705089	C	G	intronic	DNAH2	NA	NA	NA	intronic	ENSG00000183914	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs4791834	0.47	0.47	0.419	0.464657	0.5765	0.5744	0.6052	0.1346	0.5828	0.57	0.57	0.55	0.16	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.02234	NA	NA	NA	NA	NA	0.449	NA	3.4235
1310	21	47537882	47537882	G	A	intronic	COL6A2	NA	NA	NA	intronic	ENSG00000142173	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs7279347	0.47	0.47	0.424	0.451478	0.5258	0.4008	0.6499	0.3328	0.4468	0.54	0.38	0.62	0.35	0.5309	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.765426	NA	NA	0.520135	0.352325	NA	0.413	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000079839.1;CLNDSDB=.;CLNDSDBID=.	3.423165
1310	10	13838604	13838604	A	G	intronic	FRMD4A	NA	NA	NA	intronic	ENSG00000151474	NA	NA	NA	Score=251;Name=lod=14	NA	10p13	NA	NA	NA	NA	rs3740121	0.42	0.42	0.401	0.395767	0.5258	0.4653	0.4409	0.115	0.5378	0.53	0.5	0.44	0.16	0.5034	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.761979	1.761979	NA	0.547907	0.167272	NA	0.355	NA	3.422893
1310	19	10475760	10475760	G	A	intronic	TYK2	NA	NA	NA	intronic	ENSG00000105397	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs12720270	0.22	0.22	0.193	0.207668	0.168	0.5	0.1441	0.031	0.2311	0.17	0.46	0.18	0.04	0.226	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.279538	NA	NA	0.183488	0.067408	NA	0.087	NA	3.422512
1310	1	33234153	33234153	G	A	intronic	KIAA1522	NA	NA	NA	intronic	ENSG00000162522	NA	NA	NA	NA	NA	1p35.1	NA	NA	NA	NA	rs3737993	0.58	0.58	0.582	0.569888	0.5775	0.7341	0.5937	0.4221	0.5757	0.57	0.73	0.6	0.41	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.717801	NA	NA	NA	NA	NA	0.551	NA	3.4225
1310	2	216861273	216861273	T	C	intronic	MREG	NA	NA	NA	intronic	ENSG00000115425,ENSG00000118242	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs2303845	0.5	0.5	0.488	0.500799	0.5775	0.3442	0.5259	0.5741	0.4663	0.57	0.33	0.52	0.57	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.221933	NA	NA	NA	NA	NA	0.471	NA	3.4225
1310	6	572714	572714	C	T	intronic	EXOC2	NA	NA	NA	intronic	ENSG00000112685	NA	NA	NA	NA	NA	6p25.3	NA	NA	NA	NA	rs12154040	0.46	0.46	0.435	0.467652	0.5775	0.3502	0.6643	0.2458	0.636	0.57	0.38	0.62	0.28	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.237477	NA	NA	NA	NA	NA	0.529	NA	3.4225
1310	10	17061681	17061681	A	G	intronic	CUBN	NA	NA	NA	intronic	ENSG00000107611	NA	NA	NA	NA	NA	10p13	NA	NA	NA	NA	rs3740164	0.68	0.68	0.677	0.676118	0.5775	0.6647	0.6888	0.8079	0.6022	0.6	0.67	0.67	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.217238	NA	NA	NA	NA	NA	0.703	NA	3.4225
1310	16	72057282	72057282	A	G	intronic	DHODH	NA	NA	NA	intronic	ENSG00000102967	NA	NA	NA	NA	NA	16q22.2	NA	NA	NA	NA	rs2288002	0.51	0.51	0.533	0.544928	0.5775	0.37	0.402	0.6112	0.7035	0.58	0.38	0.43	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.025702	NA	NA	NA	NA	NA	0.601	NA	3.4225
1310	2	218679599	218679599	T	C	intronic	TNS1	NA	NA	NA	intronic	ENSG00000079308	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs2059408	0.21	0.21	0.178	0.179912	0.1889	0.4315	0.147	0.0348	0.1309	0.19	0.4	0.16	0.03	0.204	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.343209	NA	NA	0.184884	0.069678	NA	0.109	NA	3.422216
1310	13	102366742	102366742	C	T	intronic	ITGBL1	NA	NA	NA	intronic	ENSG00000198542	NA	NA	NA	NA	NA	13q33.1	NA	NA	NA	NA	rs2281990	0.13	0.13	0.133	0.127596	0.1988	0.1319	0.1412	0.0363	0.1636	0.19	0.12	0.15	0.04	0.1702	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.122584	NA	NA	0.208953	0.064911	NA	0.188	NA	3.422047
1310	19	4294551	4294551	T	C	intronic	TMIGD2	NA	NA	NA	intronic	ENSG00000167664	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs62129297	0.12	0.12	0.111	0.135783	0.1859	0.0704	0.1354	0.0635	0.2495	0.21	0.06	0.14	0.06	0.1902	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.362564	NA	NA	0.202093	0.083749	NA	0.094	NA	3.421807
1310	9	90498210	90498210	T	C	intronic	SPATA31E1	NA	NA	NA	intronic	ENSG00000177992	NA	NA	NA	NA	NA	9q22.1	NA	NA	NA	NA	rs4072357	0.76	0.76	0.771	0.761781	0.5785	0.873	0.7233	0.9402	0.6217	0.58	0.87	0.71	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.933194	NA	NA	NA	NA	NA	0.725	NA	3.4215
1310	14	107275814	107275814	A	G	intergenic	LINC00221,NONE	dist=324285;dist=NONE	NA	NA	downstream	ENSG00000254284	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs73396201	NA	NA	0.252	0.163538	0.0785	0.0456	0.134	0.3321	0.1656	NA	NA	NA	NA	NA	0.076	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.551623	NA	NA	NA	NA	NA	0.065	NA	3.4215
1310	12	108042960	108042960	C	G	intronic	BTBD11	NA	NA	NA	intronic	ENSG00000151136	NA	NA	NA	NA	NA	12q23.3	NA	NA	NA	NA	rs17039588	0.24	0.24	0.217	0.193091	0.1829	0.4613	0.245	0.0136	0.1329	0.19	0.52	0.2	0.03	0.2055	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.765613	NA	NA	0.190233	0.039265	NA	0.174	NA	3.421367
1310	19	54613420	54613420	G	A	intronic	TFPT	NA	NA	NA	intronic	ENSG00000105619	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs12609379	0.2	0.2	0.174	0.180711	0.2008	0.1944	0.1988	0.1014	0.2403	0.22	0.25	0.22	0.13	0.1909	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.489541	NA	NA	0.186977	0.119383	NA	0.123	NA	3.421323
1310	14	25288227	25288227	T	C	intronic	STXBP6	NA	NA	NA	intronic	ENSG00000168952	NA	NA	NA	NA	NA	14q12	NA	NA	NA	NA	rs749594	0.32	0.32	0.314	0.334665	0.1918	0.3819	0.1556	0.6135	0.183	0.19	0.36	0.15	0.61	0.2237	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.924063	NA	NA	0.163605	0.533818	NA	0.217	NA	3.420895
1310	3	53529140	53529140	T	C	UTR5	CACNA1D	NM_001128840:c.-54T>C,NM_001128839:c.-54T>C,NM_000720:c.-54T>C	NA	NA	UTR5	ENSG00000157388	ENST00000350061:c.-54T>C,ENST00000288139:c.-54T>C	NA	NA	NA	NA	3p21.1	NA	NA	NA	NA	rs312480	0.87	0.87	0.789	0.859425	0.9125	0.9633	0.9121	0.6377	0.9601	0.93	0.96	0.91	0.64	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.523163	1.523163	NA	NA	NA	NA	0.37	NA	3.4208334
1310	11	6292838	6292838	G	A	UTR3	CCKBR	NM_176875:c.*65G>A	NA	NA	UTR3	ENSG00000110148	ENST00000334619:c.*65G>A,ENST00000532715:c.*65G>A,ENST00000525462:c.*65G>A	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs10839536	0.7	0.7	0.2	0.833866	0.9125	0.9504	0.8804	0.6362	0.8671	0.75	0.73	0.72	0.55	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.544308	NA	NA	NA	NA	NA	0.007	NA	3.4208334
1310	9	95888667	95888667	T	C	intronic	NINJ1	NA	NA	NA	intronic	ENSG00000131669	NA	NA	NA	NA	NA	9q22.31	NA	NA	NA	NA	rs12235416	0.23	0.23	0.202	0.220048	0.1879	0.247	0.0965	0.3517	0.135	0.19	0.23	0.11	0.38	0.2036	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.528984	NA	NA	0.187878	0.334545	ID=COSN168605;OCCURENCE=2(large_intestine)	0.174	NA	3.420622
1310	9	139402908	139402908	T	C	intronic	NOTCH1	NA	NA	NA	intronic	ENSG00000148400	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs3812603	0.75	0.75	0.736	0.761382	0.5795	0.9147	0.6398	0.9365	0.6401	0.57	0.88	0.67	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.581487	NA	NA	NA	NA	NA	0.739	NA	3.4205
1310	12	23757245	23757245	C	T	intronic	SOX5	NA	NA	NA	intronic	ENSG00000134532	NA	NA	NA	NA	NA	12p12.1	NA	NA	NA	NA	rs1479452	0.63	0.63	0.635	0.625799	0.5795	0.6974	0.5216	0.6967	0.5777	0.58	0.66	0.56	0.73	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.573933	NA	NA	NA	NA	NA	0.674	NA	3.4205
1310	15	87217721	87217721	C	G	intronic	AGBL1	NA	NA	NA	intronic	ENSG00000166748	NA	NA	NA	NA	NA	15q25.3	NA	NA	NA	NA	rs11856329	0.42	0.42	0.432	0.437101	0.5795	0.3403	0.4438	0.3691	0.4775	0.58	0.3	0.42	0.31	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.435382	NA	NA	NA	NA	NA	0.5	NA	3.4205
1310	19	52012269	52012269	G	A	intergenic	SIGLEC12,SIGLEC6	dist=7226;dist=10515	NA	NA	ncRNA_intronic	ENSG00000269580	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs11668941	0.4	0.4	0.38	0.402356	0.5795	0.2758	0.5677	0.1278	0.6043	0.59	0.26	0.56	0.16	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.719777	NA	NA	NA	NA	NA	0.362	NA	3.4205
1310	22	47568971	47568971	C	T	intronic	TBC1D22A	NA	NA	NA	intronic	ENSG00000054611	NA	NA	NA	NA	NA	22q13.31	NA	NA	NA	NA	rs5767564	0.49	0.49	0.468	0.483626	0.5795	0.5526	0.4899	0.3064	0.5491	0.57	0.55	0.5	0.31	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.127544	NA	NA	NA	NA	NA	0.42	NA	3.4205
1310	3	143567207	143567207	A	G	UTR5	SLC9A9	NM_173653:c.-43T>C	NA	NA	UTR5	ENSG00000181804	ENST00000316549:c.-43T>C,ENST00000474727:c.-43T>C,ENST00000474151:c.-43T>C	NA	NA	NA	NA	3q24	NA	Name=Pol2,Pol2-4H8	Name=122	NA	rs11714060	0.95	0.95	0.945	0.95008	0.9732	1	0.9625	0.8517	0.999	0.98	1	0.95	0.86	0.9714	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.027554	NA	NA	0.968953	0.888334	NA	0.942	NA	3.4197804
1310	11	6477455	6477455	C	T	intronic	TRIM3	NA	NA	NA	intronic	ENSG00000110171	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs13343175	0.17	0.17	0.194	0.196885	0.1849	0.0188	0.1787	0.3321	0.2229	0.19	0.03	0.15	0.34	0.1891	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.360863	1.360863	NA	0.206238	0.324171	NA	0.326	NA	3.419762
1310	1	70225832	70225832	G	A	upstream	LRRC7	NA	NA	NA	intronic	ENSG00000033122	NA	NA	NA	NA	NA	1p31.1	NA	NA	NA	NA	rs17397812	0.14	0.14	0.121	0.113419	0.2376	0.0714	0.1297	0.0477	0.1063	0.23	0.1	0.16	0.04	0.176	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.060735	NA	NA	NA	NA	NA	0.138	NA	3.4197333
1310	8	62465580	62465580	T	C	intronic	ASPH	NA	NA	NA	intronic	ENSG00000198363	NA	NA	NA	NA	NA	8q12.3	NA	NA	NA	NA	rs4289805	0.34	0.34	0.357	0.342452	0.175	0.3571	0.2205	0.6687	0.1452	0.16	0.38	0.2	0.65	0.2272	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.908101	NA	NA	0.17814	0.554017	NA	0.29	NA	3.41966
1310	1	175086461	175086461	A	G	intronic	TNN	NA	NA	NA	intronic	ENSG00000120332	NA	NA	NA	NA	NA	1q25.1	NA	NA	NA	NA	rs6690229	0.62	0.62	0.657	0.647963	0.5805	0.4167	0.5533	0.9576	0.6043	0.59	0.43	0.55	0.95	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.339219	NA	NA	NA	NA	NA	0.783	NA	3.4195
1310	7	148903984	148903984	G	A	intronic	ZNF282	NA	NA	NA	intronic	ENSG00000170265	NA	NA	NA	NA	NA	7q36.1	NA	NA	NA	NA	rs12537763	0.59	0.59	0.561	0.582069	0.5805	0.9246	0.6571	0.1142	0.8098	0.6	0.94	0.64	0.14	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.207802	NA	NA	NA	NA	NA	0.601	NA	3.4195
1310	9	117086226	117086226	A	G	intronic	ORM1	NA	NA	NA	intronic	ENSG00000229314	NA	NA	NA	NA	NA	9q32	NA	NA	NA	NA	rs1111796	0.72	0.72	0.702	0.73143	0.5805	0.8482	0.5836	0.8654	0.6902	0.59	0.84	0.59	0.88	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.30497	1.30497	NA	NA	NA	NA	0.746	NA	3.4195
1310	16	70502610	70502610	C	G	intronic	FUK	NA	NA	NA	intronic	ENSG00000157353	NA	NA	NA	NA	NA	16q22.1	NA	NA	NA	NA	rs12446395	0.63	0.63	0.631	0.600439	0.5805	0.63	0.6167	0.7844	0.3303	0.57	0.64	0.63	0.73	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.963693	NA	NA	NA	NA	NA	0.536	NA	3.4195
1310	18	72186404	72186404	G	A	intronic	CNDP2	NA	NA	NA	intronic	ENSG00000133313	NA	NA	NA	NA	NA	18q22.3	NA	NA	NA	NA	rs2241508	0.6	0.6	0.576	0.596446	0.5805	0.876	0.7248	0.2307	0.728	0.59	0.89	0.68	0.24	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.836899	NA	NA	NA	NA	NA	0.5	NA	3.4195
1310	19	57835252	57835252	C	T	intronic	ZNF543	NA	NA	NA	intronic	ENSG00000178229	NA	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs4801216	0.55	0.55	0.516	0.526757	0.5805	0.4325	0.621	0.5885	0.4182	0.59	0.47	0.63	0.54	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.508922	NA	NA	NA	NA	NA	0.406	NA	3.4195
1310	22	31329056	31329056	G	C	intronic	MORC2	NA	NA	NA	intronic	ENSG00000133422	NA	NA	NA	NA	NA	22q12.2	NA	Name=Pol2-4H8	NA	NA	rs2074578	0.59	0.59	0.576	0.604633	0.5169	0.7659	0.4971	0.6339	0.5654	0.5	0.7	0.56	0.63	0.5402	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.902326	NA	NA	0.523488	0.609396	NA	0.572	NA	3.419412
1310	17	48472270	48472270	C	T	intronic	LRRC59	NA	NA	NA	intronic	ENSG00000108829	NA	NA	NA	NA	NA	17q21.33	NA	Name=ELF1_(SC-631)	Name=22	NA	rs3760407	0.72	0.72	0.739	0.725839	0.8757	0.244	0.879	0.9266	0.6881	0.87	0.24	0.91	0.93	0.8124	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.351596	2.351596	NA	0.892907	0.924421	NA	0.841	NA	3.418993
1310	6	8026577	8026577	T	C	ncRNA_intronic	BLOC1S5-TXNDC5,EEF1E1-MUTED	NA	NA	NA	intronic	ENSG00000188428,ENSG00000259040,ENSG00000265818	NA	NA	NA	NA	NA	6p24.3	NA	NA	Name=3	NA	rs9328452	0.69	0.69	0.686	0.69389	0.6183	0.9395	0.6729	0.5265	0.7597	0.63	0.94	0.65	0.52	0.6691	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.187035	NA	NA	0.626977	0.537449	NA	0.616	NA	3.4189563
1310	11	130781685	130781685	G	C	intronic	SNX19	NA	NA	NA	intronic	ENSG00000120451	NA	NA	NA	NA	NA	11q24.3	NA	NA	NA	NA	rs12420847	0.14	0.14	0.143	0.127596	0.1988	0.1538	0.0893	0.0492	0.1605	0.2	0.17	0.1	0.05	0.1746	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.203706	NA	NA	0.207936	0.071558	NA	0.217	NA	3.418664
1310	19	844077	844077	A	C	intronic	PRTN3	NA	NA	NA	intronic	ENSG00000196415	NA	NA	NA	NA	NA	19p13.3	NA	NA	Name=4	NA	rs351112	0.59	0.59	0.57	0.627596	0.4692	0.5635	0.6744	0.7451	0.6646	0.49	0.57	0.64	0.71	0.6477	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.383924	NA	NA	0.464436	0.698355	NA	0.116	NA	3.418664
1310	21	46047418	46047418	C	T	exonic	KRTAP10-9	NA	synonymous SNV	KRTAP10-9:NM_198690:exon1:c.C330T:p.C110C	exonic	ENSG00000221837	NA	synonymous SNV	ENSG00000221837:ENST00000397911:exon1:c.C330T:p.C110C	NA	NA	21q22.3	NA	NA	NA	NA	rs8126553	0.77	0.77	0.737	0.787141	0.7714	0.6746	0.745	0.9123	0.7802	0.77	0.64	0.77	0.91	0.7533	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.346523	NA	NA	0.723308	0.888914	NA	0.507	NA	3.4186586
1310	1	25254317	25254317	C	T	intronic	RUNX3	NA	NA	NA	intronic	ENSG00000020633	NA	NA	NA	NA	NA	1p36.11	NA	NA	NA	NA	rs7517302	0.53	0.53	0.537	0.545128	0.5815	0.5575	0.5778	0.444	0.6084	0.58	0.49	0.57	0.47	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.067095	NA	NA	NA	NA	NA	0.565	NA	3.4185
1310	3	38764782	38764782	G	T	intronic	SCN10A	NA	NA	NA	intronic	ENSG00000185313	NA	NA	NA	NA	NA	3p22.2	NA	NA	NA	NA	rs4076737	0.71	0.71	0.724	0.729034	0.5815	0.7232	0.5965	0.9478	0.6851	0.57	0.78	0.6	0.94	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.122547	NA	NA	NA	NA	NA	0.667	NA	3.4185
1310	4	44700453	44700453	G	C	intronic	GUF1	NA	NA	NA	intronic	ENSG00000151806	NA	NA	NA	NA	NA	4p12	NA	NA	NA	NA	rs1547526	0.46	0.46	0.4	0.423522	0.5815	0.4008	0.5101	0.2731	0.4264	0.6	0.4	0.52	0.27	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.430756	NA	NA	NA	NA	NA	0.609	NA	3.4185
1310	15	50601811	50601811	T	C	intronic	GABPB1	NA	NA	NA	intronic	ENSG00000104064	NA	NA	NA	NA	NA	15q21.2	NA	NA	NA	NA	rs11636564	0.37	0.37	0.377	0.360423	0.5815	0.0407	0.5533	0.2958	0.4131	0.57	0.04	0.57	0.29	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.071245	NA	NA	NA	NA	NA	0.493	NA	3.4185
1310	12	123907563	123907563	G	A	intronic	RILPL2	NA	NA	NA	intronic	ENSG00000150977	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs28625019	0.14	0.14	0.127	0.145168	0.2058	0.002	0.1916	0.143	0.2004	0.22	NA	0.19	0.15	0.1888	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.884013	NA	NA	0.187093	0.154562	NA	0.167	NA	3.418307
1310	11	130781675	130781675	C	T	intronic	SNX19	NA	NA	NA	intronic	ENSG00000120451	NA	NA	NA	NA	NA	11q24.3	NA	NA	NA	NA	rs12420822	0.14	0.14	0.133	0.127596	0.1988	0.1538	0.0893	0.0492	0.1605	0.2	0.17	0.1	0.05	0.1746	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.114786	NA	NA	0.208401	0.071558	NA	0.217	NA	3.418199
1310	10	95353817	95353817	C	G	intronic	RBP4	NA	NA	NA	intronic	ENSG00000138207,ENSG00000186188	NA	NA	NA	NA	NA	10q23.33	NA	NA	NA	NA	rs12265684	0.2	0.2	0.206	0.241214	0.1988	0.0913	0.1614	0.348	0.3517	0.19	0.1	0.18	0.36	0.2044	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.235475	NA	NA	0.178837	0.332728	NA	0.283	NA	3.417963
1310	6	38702212	38702212	G	A	intronic	DNAH8	NA	NA	NA	intronic	ENSG00000124721	NA	NA	NA	NA	NA	6p21.2	NA	NA	NA	NA	rs1698996	0.17	0.17	0.164	0.167332	0.3161	0.0089	0.2104	0.1014	0.2362	0.32	0.01	0.23	0.1	0.266	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.136653	NA	NA	NA	NA	NA	0.174	NA	3.4179
1310	7	47979922	47979922	A	G	intronic	PKD1L1	NA	NA	NA	intronic	ENSG00000136273,ENSG00000158683	NA	NA	NA	NA	NA	7p12.3	NA	Name=STAT3	NA	NA	rs2708913	0.51	0.51	NA	0.496406	0.5239	0.5119	0.5259	0.5242	0.3937	0.53	0.49	0.5	0.49	0.5529	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.950811	NA	NA	0.505349	0.517022	NA	0.601	NA	3.417851
1310	17	69368	69368	G	C	intronic	RPH3AL	NA	NA	NA	intronic	ENSG00000181031	NA	NA	NA	NA	NA	17p13.3	NA	NA	NA	NA	rs62059560	0.24	0.24	0.238	0.00778754	0.0219	0.0069	0.0086	NA	0.0041	0.33	0.26	0.21	0.08	0.2714	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.076726	NA	NA	0.288904	0.077848	NA	0.362	NA	3.417796
1310	6	36041431	36041431	A	G	intronic	MAPK14	NA	NA	NA	intronic	ENSG00000112062	NA	NA	NA	NA	NA	6p21.31	NA	Name=PU.1	NA	NA	rs851010	0.36	0.36	0.373	0.384784	0.5666	0.253	0.4121	0.1596	0.6186	0.55	0.25	0.43	0.16	0.4788	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.992789	NA	NA	0.537093	0.222197	ID=COSN167753;OCCURENCE=1(large_intestine)	0.326	NA	3.417507
1310	1	161176137	161176137	A	G	intronic	NDUFS2	NA	NA	NA	intronic	ENSG00000158864	NA	NA	NA	NA	NA	1q23.3	NA	NA	NA	NA	rs4656993	0.69	0.69	0.717	0.704473	0.5825	0.8909	0.6902	0.6097	0.7761	0.58	0.92	0.64	0.65	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.306399	NA	NA	NA	NA	NA	0.601	NA	3.4175
1310	2	89416689	89416689	C	T	intergenic	MIR4436A,NONE	dist=304721;dist=NONE	NA	NA	downstream	ENSG00000240382	NA	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs112656330	0.05	0.05	NA	0.0704872	0.0825	0.0069	0.0576	0.0885	0.1084	0.07	0.01	0.03	0.07	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.510402	NA	NA	NA	NA	NA	NA	NA	3.4175
1310	12	94984559	94984559	T	C	intronic	TMCC3	NA	NA	NA	intronic	ENSG00000057704	NA	NA	NA	NA	NA	12q22	NA	NA	NA	NA	rs4761637	0.56	0.56	0.55	0.54972	0.5825	0.4544	0.5865	0.6074	0.5102	0.58	0.47	0.6	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.235715	NA	NA	NA	NA	NA	0.507	NA	3.4175
1310	16	31427678	31427678	C	T	intronic	ITGAD	NA	NA	NA	intronic	ENSG00000156886	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs8056122	0.56	0.56	0.526	0.521366	0.5825	0.6488	0.6124	0.2973	0.5654	0.59	0.7	0.61	0.3	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.047542	NA	NA	NA	NA	NA	0.565	NA	3.4175
1310	18	9679457	9679457	G	A	intergenic	PPP4R1,RAB31	dist=64852;dist=28771	NA	NA	ncRNA_exonic	ENSG00000264644	NA	NA	NA	NA	NA	18p11.22	NA	NA	NA	NA	rs2124300	0.47	0.47	0.487	0.449481	0.5825	0.3542	0.3948	0.5242	0.3487	0.58	0.34	0.42	0.5	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.099089	NA	NA	NA	NA	NA	0.58	NA	3.4175
1310	12	123352179	123352179	C	T	intronic	VPS37B	NA	NA	NA	intronic	ENSG00000139722	NA	NA	NA	NA	NA	12q24.31	NA	Name=Pol2-4H8,CTCF	Name=40	NA	rs3825143	0.77	0.77	0.75	0.735823	0.8648	0.7649	0.9121	0.5598	0.6861	0.87	0.75	0.89	0.54	0.827	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.259096	NA	NA	0.890814	0.625057	NA	0.768	NA	3.417386
1310	1	240497265	240497265	A	C	intronic	FMN2	NA	NA	NA	intronic	ENSG00000155816	NA	NA	NA	NA	NA	1q43	NA	Name=MafK_(ab50322)	NA	NA	rs10157874	0.64	0.64	0.662	0.65016	0.5119	0.5278	0.7046	0.9244	0.5092	0.52	0.56	0.7	0.88	0.5717	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.072328	NA	NA	0.499186	0.860064	NA	0.623	NA	3.417214
1310	6	29069016	29069016	G	A	intergenic	OR2B3,OR2J3	dist=13926;dist=10652	NA	NA	exonic	ENSG00000204702	NA	synonymous SNV	ENSG00000204702:ENST00000377171:exon1:c.G297A:p.T99T	NA	NA	6p22.1	NA	NA	NA	NA	rs3131088	0.39	0.39	0.373	0.336861	0.5815	0.3512	0.4323	0.0454	0.3967	0.61	0.35	0.44	0.05	0.5013	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.133526	NA	NA	NA	NA	NA	0.312	NA	3.4172
1310	16	20492304	20492304	A	T	intronic	ACSM2A	NA	NA	NA	intronic	ENSG00000183747	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs1700809	0.49	0.49	0.49	0.508986	0.2614	0.7917	0.2781	0.6392	0.4601	0.28	0.8	0.29	0.62	0.3215	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.506262	NA	NA	NA	NA	NA	0.449	NA	3.4171
1310	12	56565392	56565392	T	G	intronic	SMARCC2	NA	NA	NA	ncRNA_intronic	ENSG00000258199	NA	NA	NA	NA	NA	12q13.2	NA	NA	NA	NA	rs7311008	0.79	0.79	0.764	0.757987	0.9165	0.9732	0.8775	0.2753	0.9407	0.92	0.97	0.88	0.33	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.399476	NA	NA	NA	NA	NA	0.739	NA	3.4168333
1310	15	91795758	91795758	A	C	intronic	SV2B	NA	NA	NA	intronic	ENSG00000185518	NA	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs16945457	0.19	0.19	0.222	0.204273	0.2048	0.001	0.1556	0.4697	0.089	0.2	NA	0.17	0.42	0.1874	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.297247	NA	NA	0.191019	0.436306	NA	0.174	NA	3.416781
1310	2	231740276	231740276	A	G	intronic	ITM2C	NA	NA	NA	intronic	ENSG00000135916	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs2289231	0.64	0.64	0.64	0.608826	0.5835	0.8571	0.6758	0.4357	0.5654	0.6	0.86	0.64	0.46	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.299197	NA	NA	NA	NA	NA	0.5	NA	3.4165
1310	9	73457832	73457832	G	A	intronic	TRPM3	NA	NA	NA	intronic	ENSG00000083067	NA	NA	NA	NA	NA	9q21.12	NA	NA	NA	NA	rs1337031	0.51	0.51	0.457	0.520567	0.5835	0.2728	0.5591	0.5885	0.592	0.59	0.26	0.61	0.58	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.203934	NA	NA	NA	NA	NA	0.565	NA	3.4165
1310	21	43714517	43714517	A	C	intronic	ABCG1	NA	NA	NA	intronic	ENSG00000160179	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs9975333	0.61	0.61	0.591	0.594848	0.5835	0.5933	0.6052	0.6649	0.5061	0.58	0.63	0.64	0.63	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.082371	NA	NA	NA	NA	NA	0.717	NA	3.4165
1310	9	32986040	32986040	A	C	intronic	APTX	NA	NA	NA	intronic	ENSG00000137074	NA	NA	NA	NA	NA	9p21.1	NA	NA	NA	NA	rs1981011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5836	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.002327	NA	NA	NA	NA	NA	NA	NA	3.4164
1310	11	130777813	130777813	G	A	intronic	SNX19	NA	NA	NA	intronic	ENSG00000120451	NA	NA	NA	NA	NA	11q24.3	NA	NA	NA	NA	rs2276097	0.15	0.15	0.142	0.129593	0.1988	0.1637	0.0893	0.0492	0.1605	0.2	0.19	0.1	0.05	0.1768	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.394762	NA	NA	0.208168	0.071558	NA	0.217	NA	3.416232
1310	19	49543115	49543115	C	T	intergenic	SNAR-G1,CGB5	dist=2711;dist=3987	NA	NA	intronic	ENSG00000267631	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs62126043	0.2	0.2	0.183	0.199481	0.2505	0.128	0.304	0.121	0.2526	0.24	0.14	0.28	0.15	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.933829	NA	NA	NA	NA	NA	0.232	NA	3.4161667
1310	7	90003694	90003694	A	C	intronic	GTPBP10	NA	NA	NA	intronic	ENSG00000105793	NA	NA	NA	NA	NA	7q21.13	NA	NA	NA	NA	rs11563547	0.14	0.14	0.12	0.115815	0.2028	0.1131	0.2089	0.0431	0.0613	0.21	0.11	0.19	0.04	0.1815	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.404266	NA	NA	0.199673	0.080872	NA	0.145	NA	3.416027
1310	5	98194781	98194781	C	G	intronic	CHD1	NA	NA	NA	intronic	ENSG00000153922	NA	NA	NA	NA	NA	5q15	NA	NA	NA	NA	rs330421	0.3	0.3	0.326	0.302316	0.2903	0.0427	0.2392	0.6301	0.184	0.28	0.05	0.27	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.837422	NA	NA	0.294025	0.567197	NA	0.37	NA	3.415675
1310	3	29129983	29129983	G	A	intergenic	LINC00693,RBMS3	dist=330155;dist=192820	NA	NA	ncRNA_exonic	ENSG00000215004	NA	NA	NA	NA	NA	3p24.1	NA	NA	NA	NA	rs609465	0.62	0.62	0.605	0.655152	0.5845	0.5615	0.7392	0.7269	0.6677	0.58	0.58	0.69	0.67	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.418056	NA	NA	NA	NA	NA	0.572	NA	3.4155
1310	11	7794976	7794976	T	A	intergenic	OVCH2,OR5P2	dist=67035;dist=22545	NA	NA	ncRNA_exonic	ENSG00000166408	NA	NA	NA	Score=251;Name=lod=14	NA	11p15.4	NA	NA	NA	NA	rs980145	0.7	0.7	0.692	0.719848	0.7793	0.6042	0.7723	0.68	0.7945	0.78	0.61	0.78	0.63	0.8052	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.750613	1.750613	NA	NA	NA	NA	0.725	NA	3.4155
1310	14	69791308	69791308	T	A	intronic	GALNT16	NA	NA	NA	intronic	ENSG00000100626	NA	NA	NA	NA	NA	14q24.1	NA	NA	NA	NA	rs2045194	0.54	0.54	0.483	0.552316	0.5845	0.5903	0.7089	0.2678	0.7536	0.58	0.62	0.67	0.27	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.05439	NA	NA	NA	NA	NA	0.406	NA	3.4155
1310	19	41897674	41897674	G	A	intronic	EXOSC5	NA	NA	NA	intronic	ENSG00000077348,ENSG00000248098,ENSG00000255730	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs878082	0.51	0.51	0.501	0.506989	0.5845	0.4246	0.4467	0.4758	0.5971	0.58	0.45	0.51	0.49	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.436102	NA	NA	NA	NA	NA	0.572	NA	3.4155
1311	9	86278773	86278773	T	C	intronic	UBQLN1	NA	NA	NA	intronic	ENSG00000135018	NA	NA	NA	NA	NA	9q21.32	NA	NA	NA	NA	rs9314722	0.16	0.16	0.144	0.177915	0.1988	0.002	0.1369	0.2927	0.2117	0.19	0.0017	0.14	0.29	0.1875	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.13215	NA	NA	0.198721	0.277349	NA	0.188	NA	3.414979
1311	8	62563718	62563718	G	T	intronic	ASPH	NA	NA	NA	intronic	ENSG00000198363	NA	NA	NA	NA	NA	8q12.3	NA	NA	NA	NA	rs7016408	0.18	0.18	0.175	0.221845	0.1899	0.2063	0.1758	0.1649	0.3804	0.18	0.23	0.18	0.15	0.2099	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.573411	NA	NA	0.185276	0.156676	NA	0.268	NA	3.414924
1311	7	87199564	87199564	C	A	intronic	ABCB1	NA	NA	NA	intronic	ENSG00000085563	NA	NA	NA	NA	NA	7q21.12	NA	NA	NA	NA	rs2235015	0.2	0.2	0.229	0.215655	0.2068	0.0714	0.1513	0.3918	0.181	0.2	0.06	0.17	0.39	0.1813	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.372305	NA	NA	0.197023	0.343395	NA	0.283	NA	3.414877
1311	8	144400065	144400065	C	T	intronic	TOP1MT	NA	NA	NA	intronic	ENSG00000184428	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs2272635	0.27	0.27	0.302	0.277756	0.3101	0.0774	0.1873	0.5083	0.2035	0.3	0.07	0.2	0.53	0.2753	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.952475	NA	NA	NA	NA	NA	0.297	NA	3.4146
1311	2	160862094	160862094	G	A	intronic	PLA2R1	NA	NA	NA	intronic	ENSG00000153246	NA	NA	NA	NA	NA	2q24.2	NA	NA	NA	NA	rs2667004	0.52	0.52	0.505	0.457867	0.5855	0.5833	0.353	0.3941	0.3579	0.59	0.63	0.37	0.4	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.434522	NA	NA	NA	NA	NA	0.478	NA	3.4145
1311	4	4275986	4275986	A	C	intronic	LYAR	NA	NA	NA	intronic	ENSG00000145220	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs11723471	NA	NA	NA	0.397764	0.5855	0.3452	0.5403	0.1536	0.4877	NA	NA	NA	NA	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.336959	NA	NA	NA	NA	NA	0.493	NA	3.4145
1311	15	86029097	86029097	C	G	intronic	AKAP13	NA	NA	NA	intronic	ENSG00000170776	NA	NA	NA	NA	NA	15q25.3	NA	NA	NA	NA	rs11856869	0.4	0.4	0.371	0.388578	0.5855	0.2113	0.4755	0.4009	0.2904	0.53	0.22	0.49	0.34	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.742552	NA	NA	NA	NA	NA	0.435	NA	3.4145
1311	17	16722984	16722984	G	A	intergenic	USP32P1,KRT16P2	dist=15165;dist=10813	NA	NA	ncRNA_intronic	ENSG00000226145	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs3852824	0.7	0.7	0.724	0.734824	0.5855	0.9534	0.6758	0.7451	0.6912	0.58	0.95	0.66	0.63	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.507673	NA	NA	NA	NA	NA	0.58	NA	3.4145
1311	19	41897688	41897688	G	A	intronic	EXOSC5	NA	NA	NA	intronic	ENSG00000077348,ENSG00000248098,ENSG00000255730	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs878083	0.55	0.55	0.556	0.54393	0.5855	0.4246	0.4654	0.6044	0.5982	0.58	0.45	0.54	0.62	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.592253	NA	NA	NA	NA	NA	0.63	NA	3.4145
1311	19	54782589	54782589	T	C	intronic	LILRB2	NA	NA	NA	intronic	ENSG00000131042	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs586206	0.42	0.42	0.339	0.44369	0.5855	0.2688	0.5778	0.4191	0.4162	0.57	0.16	0.52	0.41	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.77244	NA	NA	NA	NA	NA	0.507	NA	3.4145
1311	21	38092039	38092039	A	C	intronic	SIM2	NA	NA	NA	intronic	ENSG00000159263	NA	NA	NA	NA	NA	21q22.13	NA	NA	NA	NA	rs2070650	0.52	0.52	0.534	0.547324	0.5855	0.502	0.6037	0.4909	0.591	0.56	0.46	0.58	0.49	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.280243	NA	NA	NA	NA	NA	0.623	NA	3.4145
1311	7	154672717	154672717	G	A	intronic	DPP6	NA	NA	NA	intronic	ENSG00000130226	NA	NA	NA	NA	NA	7q36.2	NA	NA	NA	NA	rs3817519	0.41	0.41	0.366	0.420727	0.2893	0.5476	0.4856	0.5	0.272	0.28	0.53	0.44	0.46	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.595369	NA	NA	0.296354	0.464595	NA	0.355	NA	3.414346
1311	12	32459070	32459070	T	G	intronic	BICD1	NA	NA	NA	intronic	ENSG00000151746	NA	NA	NA	NA	NA	12p11.21	NA	NA	NA	NA	rs41521147	0.15	0.15	0.142	0.1252	0.2117	0.2083	0.1427	0.0113	0.092	0.21	0.2	0.14	0.02	0.1762	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.473461	NA	NA	0.197883	0.036558	NA	0.145	NA	3.414217
1311	6	157405761	157405761	G	A	intronic	ARID1B	NA	NA	NA	intronic	ENSG00000049618	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs3734440	0.5	0.5	0.488	0.502396	0.5239	0.5903	0.6254	0.2731	0.6125	0.52	0.59	0.59	0.32	0.5227	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.604053	NA	NA	0.539302	0.336813	NA	0.464	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000114262.2;CLNDSDB=.;CLNDSDBID=.	3.414098
1311	10	71849772	71849772	A	G	intronic	H2AFY2	NA	NA	NA	intronic	ENSG00000099284	NA	NA	NA	NA	NA	10q22.1	NA	NA	NA	NA	rs16927265	0.18	0.18	0.176	0.188498	0.2048	0.0556	0.1499	0.3071	0.1759	0.19	0.06	0.18	0.3	0.1744	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.395305	NA	NA	0.207209	0.279392	NA	0.261	NA	3.413591
1311	4	40021852	40021852	C	T	intergenic	PDS5A,LOC344967	dist=42276;dist=22685	NA	NA	upstream	ENSG00000249064	NA	NA	NA	NA	NA	4p14	NA	NA	NA	NA	rs62310211	0.07	0.07	0.067	0.0852636	0.0865	0.0833	0.0548	0.0356	0.1748	0.1	0.07	0.06	0.03	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.200689	NA	NA	NA	NA	NA	0.072	NA	3.4135
1311	4	40023186	40023186	A	T	intergenic	PDS5A,LOC344967	dist=43610;dist=21351	NA	NA	downstream	ENSG00000249064	NA	NA	NA	NA	NA	4p14	NA	NA	NA	NA	rs62310212	0.07	0.07	0.062	0.0852636	0.0865	0.0833	0.0548	0.0356	0.1748	0.1	0.07	0.06	0.03	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.529491	NA	NA	NA	NA	NA	0.072	NA	3.4135
1311	6	139186074	139186074	T	C	intronic	ECT2L	NA	NA	NA	intronic	ENSG00000203734	NA	NA	NA	NA	NA	6q24.1	NA	NA	NA	NA	rs1730387	0.52	0.52	0.514	0.494209	0.5865	0.2173	0.7017	0.6286	0.3558	0.59	0.23	0.69	0.62	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.227136	NA	NA	NA	NA	NA	0.457	NA	3.4135
1311	22	42463366	42463366	C	T	intronic	NAGA	NA	NA	NA	intronic	ENSG00000198951	NA	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs133367	0.48	0.48	0.458	0.471446	0.5865	0.2966	0.6167	0.3699	0.5675	0.59	0.33	0.64	0.36	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.894518	NA	NA	NA	NA	NA	0.406	NA	3.4135
1311	12	56079084	56079084	C	G	intronic	ITGA7	NA	NA	NA	intronic	ENSG00000135424	NA	NA	NA	NA	NA	12q13.2	NA	NA	NA	NA	rs3852533	0.58	0.58	0.539	0.594649	0.495	0.9306	0.6254	0.2761	0.7597	0.51	0.92	0.58	0.31	0.5841	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.498069	NA	NA	0.507442	0.306627	NA	0.529	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000079987.1;CLNDSDB=.;CLNDSDBID=.	3.413458
1311	14	22580762	22580762	G	A	intergenic	OR4E2,DAD1	dist=446524;dist=453045	NA	NA	exonic	ENSG00000211806	NA	synonymous SNV	ENSG00000211806:ENST00000390454:exon2:c.G105A:p.E35E	NA	NA	14q11.2	NA	NA	NA	NA	rs11628824	0.21	0.21	0.184	0.199081	0.3827	0.0744	0.2911	0.0189	0.317	0.37	0.08	0.33	0.03	0.324	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.082112	NA	NA	0.379903	0.076983	NA	0.268	NA	3.413397
1311	15	52503895	52503895	T	C	intronic	MYO5C	NA	NA	NA	intronic	ENSG00000128833	NA	NA	NA	NA	NA	15q21.2	NA	NA	NA	NA	rs34276836	0.18	0.18	0.167	0.184904	0.1909	0.0913	0.2968	0.1899	0.1892	0.18	0.08	0.28	0.2	0.2072	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.712366	NA	NA	0.188519	0.18768	NA	0.21	NA	3.413381
1311	9	14662171	14662171	T	C	intronic	ZDHHC21	NA	NA	NA	intronic	ENSG00000175893	NA	NA	NA	NA	NA	9p22.3	NA	NA	NA	NA	rs10961640	0.2	0.2	0.158	0.223043	0.171	0.37	0.2248	0.0061	0.4172	0.19	0.37	0.23	0.01	0.2349	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.178776	NA	NA	0.180824	0.036104	NA	0.08	NA	3.413276
1311	6	158489778	158489778	C	T	intronic	SYNJ2	NA	NA	NA	intronic	ENSG00000078269	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs2296509	0.15	0.15	0.161	0.152955	0.2087	0.0665	0.0965	0.1861	0.18	0.21	0.07	0.11	0.18	0.1787	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.53184	NA	NA	0.199419	0.194961	NA	0.138	NA	3.413181
1311	1	47124479	47124479	A	G	intronic	ATPAF1	NA	NA	NA	intronic	ENSG00000123472,ENSG00000159658	NA	NA	NA	NA	NA	1p33	NA	NA	NA	NA	rs611468	0.54	0.54	0.529	0.538738	0.3131	0.7996	0.4654	0.6467	0.408	0.3	0.78	0.47	0.68	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.149099	NA	NA	0.273727	0.583092	NA	0.442	NA	3.413173
1311	15	25415759	25415759	G	A	upstream	SNORD115-1	NA	NA	NA	ncRNA_exonic	ENSG00000224078	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs2714734	0.73	0.73	0.707	0.715855	0.7535	0.998	0.804	0.2761	0.9182	0.75	1	0.79	0.32	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.317044	NA	NA	NA	NA	NA	0.688	NA	3.4131666
1311	13	103420680	103420680	C	A	intronic	TEX30	NA	NA	NA	intronic	ENSG00000151287	NA	NA	NA	NA	NA	13q33.1	NA	NA	NA	NA	rs1470654	0.27	0.27	0.27	0.267173	0.164	0.3968	0.2363	0.3472	0.1534	0.16	0.41	0.24	0.3	0.2259	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.615518	NA	NA	0.196991	0.315168	NA	0.014	NA	3.413109
1311	19	33702245	33702245	A	G	intronic	SLC7A10	NA	NA	NA	intronic	ENSG00000130876	NA	NA	NA	Score=243;Name=lod=13	NA	19q13.11	NA	NA	NA	NA	rs2241378	0.4	0.4	0.367	0.426118	0.5348	0.2817	0.549	0.2231	0.6503	0.55	0.29	0.54	0.21	0.5171	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.06114	2.06114	NA	0.535233	0.260327	NA	0.399	NA	3.412867
1311	10	71152091	71152091	T	C	intronic	HK1	NA	NA	NA	intronic	ENSG00000156515	NA	NA	NA	NA	NA	10q22.1	NA	Name=Pol2	NA	NA	rs2278745	0.6	0.6	0.582	0.602436	0.5189	0.6101	0.6859	0.6422	0.5675	0.51	0.65	0.64	0.65	0.5534	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.593556	NA	NA	0.514884	0.628461	NA	0.594	NA	3.412816
1311	5	167946076	167946076	A	G	intronic	RARS	NA	NA	NA	intronic	ENSG00000113643	NA	NA	NA	NA	NA	5q34	NA	NA	NA	NA	rs2305736	0.19	0.19	0.155	0.147364	0.1899	0.1726	0.3329	0.0477	0.0808	0.19	0.22	0.31	0.08	0.198	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.300692	NA	NA	0.199419	0.07626	NA	0.109	NA	3.412681
1311	5	168250429	168250429	C	T	intronic	SLIT3	NA	NA	NA	intronic	ENSG00000184347	NA	NA	NA	NA	NA	5q34	NA	NA	NA	NA	rs1875977	0.64	0.64	0.678	0.654952	0.5875	0.6687	0.5144	0.7443	0.6892	0.59	0.63	0.57	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.05805	NA	NA	NA	NA	NA	0.587	NA	3.4125
1311	8	105355840	105355840	A	G	intronic	DCSTAMP	NA	NA	NA	intronic	ENSG00000164935	NA	NA	NA	NA	NA	8q22.3	NA	NA	NA	NA	rs2458414	0.36	0.36	0.359	0.346845	0.5875	0.2252	0.3256	0.1778	0.4683	0.57	0.26	0.33	0.18	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.615149	NA	NA	NA	NA	NA	0.319	NA	3.4125
1311	14	77750057	77750057	T	G	intronic	POMT2	NA	NA	NA	intronic	ENSG00000009830	NA	NA	NA	NA	NA	14q24.3	NA	NA	NA	NA	rs2216089	0.5	0.5	0.507	0.492013	0.5875	0.495	0.4049	0.4682	0.4847	0.6	0.49	0.41	0.44	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.340777	NA	NA	NA	NA	NA	0.594	NA	3.4125
1311	16	3118865	3118865	T	C	intronic	IL32	NA	NA	NA	intronic	ENSG00000008517	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs12934561	0.52	0.52	0.501	0.540535	0.5875	0.4474	0.5245	0.5189	0.6288	0.57	0.47	0.55	0.49	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.572798	NA	NA	NA	NA	NA	0.522	NA	3.4125
1311	5	128441119	128441119	T	C	intronic	ISOC1	NA	NA	NA	intronic	ENSG00000066583	NA	NA	NA	NA	NA	5q23.3	NA	NA	NA	NA	rs2287751	0.18	0.18	0.188	0.202276	0.1789	0.1825	0.2262	0.2201	0.2055	0.18	0.14	0.19	0.23	0.2098	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.444422	NA	NA	0.198967	0.21144	NA	0.268	NA	3.412333
1311	14	20403703	20403703	T	C	upstream	OR4K1	NA	NA	NA	upstream	ENSG00000155249	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs8015196	0.26	0.26	0.246	0.270767	0.2545	0.1786	0.2651	0.3457	0.2853	0.25	0.18	0.28	0.34	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.073019	NA	NA	NA	NA	NA	0.275	NA	3.4121666
1311	14	92347680	92347680	A	G	exonic	FBLN5	NA	synonymous SNV	FBLN5:NM_006329:exon9:c.T945C:p.I315I	exonic	ENSG00000140092	NA	synonymous SNV	ENSG00000140092:ENST00000342058:exon9:c.T945C:p.I315I,ENSG00000140092:ENST00000556154:exon9:c.T960C:p.I320I,ENSG00000140092:ENST00000267620:exon10:c.T1068C:p.I356I	NA	NA	14q32.12	NA	NA	NA	NA	rs2430347	0.8	0.8	0.786	0.784944	0.7525	0.8323	0.8415	0.7708	0.7485	0.75	0.85	0.85	0.77	0.7609	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.71629	NA	NA	0.741163	0.787335	NA	0.761	NA	3.4121036
1311	1	11735262	11735262	C	T	intronic	MAD2L2	NA	NA	NA	intronic	ENSG00000116670	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs2233027	0.14	0.14	0.109	0.151957	0.1899	0.1488	0.196	0.0537	0.2178	0.19	0.13	0.2	0.04	0.2027	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.233161	NA	NA	0.195581	0.077465	NA	0.167	NA	3.411819
1311	2	201460104	201460104	A	G	intronic	AOX1	NA	NA	NA	intronic	ENSG00000138356	NA	NA	NA	NA	NA	2q33.1	NA	NA	NA	NA	rs7597590	0.3	0.3	0.296	0.277157	0.1759	0.4405	0.2709	0.2587	0.2423	0.18	0.45	0.25	0.33	0.233	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.208212	NA	NA	0.179302	0.258057	NA	0.362	NA	3.411798
1311	6	18148019	18148019	G	A	intronic	TPMT	NA	NA	NA	intronic	ENSG00000137364	NA	NA	NA	NA	NA	6p22.3	NA	NA	Name=4	NA	rs4449636	0.54	0.54	0.557	0.534145	0.5368	0.377	0.5591	0.7224	0.4213	0.54	0.38	0.53	0.75	0.5203	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.714262	NA	NA	0.53117	0.679982	NA	0.558	NA	3.41173
1311	7	138739816	138739816	C	G	intronic	ZC3HAV1	NA	NA	NA	intronic	ENSG00000105939	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs10261597	0.66	0.66	0.647	0.653155	0.5885	0.6925	0.6369	0.7057	0.6196	0.59	0.72	0.61	0.73	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.559189	NA	NA	NA	NA	NA	0.572	NA	3.4115
1311	15	59464039	59464039	G	A	intronic	MYO1E	NA	NA	NA	intronic	ENSG00000157483	NA	NA	NA	NA	NA	15q22.2	NA	NA	NA	NA	rs2306788	0.38	0.38	0.358	0.317093	0.5885	0.3304	0.4323	0.0265	0.3354	0.58	0.31	0.51	0.04	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.92344	NA	NA	NA	NA	NA	0.333	NA	3.4115
1311	19	4365397	4365397	T	C	intronic	SH3GL1	NA	NA	NA	intronic	ENSG00000141985	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs107288	0.71	0.71	0.715	0.738818	0.5885	0.7411	0.7709	0.9297	0.6104	0.57	0.72	0.74	0.91	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.648654	NA	NA	NA	NA	NA	0.732	NA	3.4115
1311	17	4880320	4880320	T	C	intronic	CAMTA2	NA	NA	NA	intronic	ENSG00000108509	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs16954309	0.18	0.18	0.16	0.178914	0.2078	0.0972	0.1988	0.2791	0.0838	0.21	0.1	0.17	0.23	0.1877	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.352107	NA	NA	0.193023	0.259646	NA	0.225	NA	3.411477
1311	4	57272620	57272620	T	C	intronic	PPAT	NA	NA	NA	intronic	ENSG00000128059	NA	NA	NA	NA	NA	4q12	NA	NA	NA	NA	rs2271923	0.29	0.29	0.263	0.300919	0.173	0.4097	0.4179	0.2398	0.32	0.18	0.42	0.38	0.23	0.2402	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.407101	NA	NA	0.175349	0.233999	NA	0.246	NA	3.411451
1311	17	74647749	74647749	G	C	intergenic	ST6GALNAC1,MXRA7	dist=7855;dist=24060	NA	NA	intergenic	ENSG00000070526,ENSG00000199735	dist=7829;dist=4653	NA	NA	Score=397;Name=lod=55	NA	17q25.1	NA	NA	NA	NA	rs7223597	0.92	0.92	0.905	0.926917	0.9225	1	0.9366	0.8366	0.9714	0.92	1	0.92	0.83	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.013823	NA	NA	NA	NA	NA	0.877	NA	3.4108334
1311	2	98254344	98254344	A	G	intergenic	ANKRD36B,COX5B	dist=47916;dist=8177	NA	NA	upstream	ENSG00000228970	NA	NA	NA	NA	NA	2q11.2	NA	NA	NA	NA	rs113911618	0.05	0.05	0.049	0.0427316	0.0895	NA	0.072	0.034	0.0297	0.09	NA	0.09	0.02	NA	0.09	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.780767	NA	NA	NA	NA	NA	0.043	NA	3.4105
1311	7	148907849	148907849	G	A	intronic	ZNF282	NA	NA	NA	intronic	ENSG00000170265	NA	NA	NA	NA	NA	7q36.1	NA	NA	NA	NA	rs10952805	0.59	0.59	0.542	0.572284	0.5895	0.8681	0.6585	0.112	0.8108	0.61	0.9	0.64	0.14	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.855753	NA	NA	NA	NA	NA	0.609	NA	3.4105
1311	14	91759751	91759751	C	T	intronic	CCDC88C	NA	NA	NA	intronic	ENSG00000015133	NA	NA	NA	NA	NA	14q32.11	NA	NA	NA	NA	rs74209170	NA	NA	NA	0.59385	0.5895	0.5982	0.6138	0.5961	0.5767	NA	NA	NA	NA	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.320359	NA	NA	NA	NA	NA	0.014	NA	3.4105
1311	3	54962013	54962013	A	C	UTR5	LRTM1	NM_020678:c.-75T>G	NA	NA	UTR5	ENSG00000144771	ENST00000273286:c.-75T>G	NA	NA	NA	NA	3p14.3	NA	NA	NA	NA	rs56327704	0.52	0.52	0.47	0.49381	0.494	0.75	0.6499	0.1838	0.5378	0.49	0.76	0.63	0.18	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.374734	NA	NA	0.428975	0.234104	NA	0.486	NA	3.4103584
1311	13	114507840	114507840	G	A	intronic	TMEM255B	NA	NA	NA	intronic	ENSG00000184497	NA	NA	NA	NA	NA	13q34	NA	Name=CTCF	NA	NA	rs7332019	0.56	0.56	0.494	0.572883	0.5278	0.8591	0.5706	0.2451	0.7689	0.53	0.85	0.55	0.26	0.5583	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.201274	NA	NA	0.503837	0.290645	NA	0.37	NA	3.410063
1311	5	1409985	1409985	C	T	intronic	SLC6A3	NA	NA	NA	intronic	ENSG00000142319	NA	NA	NA	NA	NA	5p15.33	NA	NA	NA	NA	rs8179029	0.14	0.14	0.13	0.123802	0.2276	0.0893	0.1527	0.0575	0.1217	0.22	0.08	0.19	0.06	0.157	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.458244	NA	NA	0.205513	0.07172	NA	0.051	NA	3.409887
1311	15	63958105	63958105	A	G	intronic	HERC1	NA	NA	NA	intronic	ENSG00000103657	NA	NA	NA	NA	NA	15q22.31	NA	NA	NA	NA	rs10152174	0.13	0.13	0.142	0.126797	0.2177	0.001	0.111	0.1082	0.1994	0.23	0.0017	0.14	0.11	0.1738	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.774783	NA	NA	0.198835	0.11061	NA	0.058	NA	3.409665
1311	2	224863090	224863090	C	T	intronic	SERPINE2	NA	NA	NA	intronic	ENSG00000135919	NA	NA	NA	NA	NA	2q36.1	NA	NA	NA	NA	rs10170379	0.25	0.25	0.259	0.253994	0.1909	0.129	0.2161	0.4826	0.1656	0.18	0.13	0.24	0.48	0.2047	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.648465	NA	NA	0.194884	0.438238	NA	0.239	NA	3.409516
1311	3	196751474	196751474	C	T	intronic	MFI2	NA	NA	NA	intronic	ENSG00000163975	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs2280296	0.61	0.61	0.643	0.671126	0.5905	0.6319	0.4942	0.8116	0.7301	0.59	0.6	0.5	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.399132	NA	NA	NA	NA	NA	0.696	NA	3.4095
1311	4	4275976	4275976	A	C	intronic	LYAR	NA	NA	NA	intronic	ENSG00000145220	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs11723469	NA	NA	NA	0.534944	0.5905	0.5942	0.5634	0.3275	0.6769	NA	NA	NA	NA	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.684217	NA	NA	NA	NA	NA	0.594	NA	3.4095
1311	7	101196488	101196488	T	C	intronic	COL26A1	NA	NA	NA	intronic	ENSG00000160963	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs12674244	0.47	0.47	0.472	0.492412	0.5905	0.1806	0.4438	0.6573	0.5245	0.59	0.17	0.47	0.63	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.605381	NA	NA	NA	NA	NA	0.623	NA	3.4095
1311	7	142471344	142471344	G	A	intergenic	PRSS1,PRSS3P2	dist=10417;dist=7413	NA	NA	ncRNA_intronic	ENSG00000250591	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs56225909	0.48	0.48	0.44	0.324081	0.5905	0.2321	0.5101	0.0908	0.3282	0.61	0.3	0.55	0.45	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.877336	NA	NA	NA	NA	NA	0.486	NA	3.4095
1311	17	78969386	78969386	G	C	intronic	CHMP6	NA	NA	NA	intronic	ENSG00000176108	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs4969333	0.61	0.61	0.614	0.604034	0.5905	0.5079	0.6628	0.7231	0.5143	0.59	0.52	0.63	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.872201	NA	NA	NA	NA	NA	0.659	NA	3.4095
1311	11	62933774	62933774	C	G	intronic	SLC22A25	NA	NA	NA	UTR3	ENSG00000196600	ENST00000528239:c.*2478G>C	NA	NA	NA	NA	11q12.3	NA	NA	NA	NA	rs2226866	0.27	0.27	0.24	0.243211	0.2644	0.4435	0.2896	0.0477	0.2464	0.28	0.39	0.31	0.07	0.2619	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.626678	NA	NA	0.230921	0.073376	NA	0.268	NA	3.4094457
1311	16	1272865	1272865	G	A	exonic	TPSG1	NA	synonymous SNV	TPSG1:NM_012467:exon4:c.C298T:p.L100L	exonic	ENSG00000116176	NA	synonymous SNV	ENSG00000116176:ENST00000234798:exon4:c.C298T:p.L100L	NA	NA	16p13.3	NA	NA	NA	NA	rs4984639	0.79	0.79	0.774	0.797923	0.7565	0.8988	0.768	0.7345	0.8436	0.75	0.93	0.76	0.7	0.7682	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.149907	NA	NA	0.732604	0.727666	NA	0.826	NA	3.4093626
1311	19	50519249	50519249	C	T	intronic	VRK3	NA	NA	NA	intronic	ENSG00000105053	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs1469693	0.27	0.27	0.282	0.255791	0.1809	0.3403	0.1744	0.3843	0.1299	0.19	0.33	0.2	0.4	0.2113	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.13996	NA	NA	0.199186	0.333182	NA	0.232	NA	3.408614
1311	12	47173830	47173830	G	A	intronic	SLC38A4	NA	NA	NA	intronic	ENSG00000139209	NA	NA	NA	NA	NA	12q13.11	NA	NA	NA	NA	rs2287471	0.17	0.17	0.171	0.176318	0.1899	0.1438	0.1138	0.1846	0.229	0.2	0.12	0.14	0.21	0.1897	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.870087	3.870087	NA	0.211793	0.177258	ID=COSN164228;OCCURENCE=1(NS)	0.21	NA	3.408607
1311	12	6030165	6030165	G	A	intronic	ANO2	NA	NA	NA	intronic	ENSG00000047617	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs3825332	0.16	0.16	0.129	0.145367	0.2147	0.1855	0.1427	0.0348	0.184	0.21	0.18	0.17	0.03	0.1732	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.251707	NA	NA	0.203584	0.076076	NA	0.08	NA	3.408516
1311	1	13171847	13171847	A	G	intergenic	PRAMEF5,LOC440563	dist=54096;dist=11113	NA	NA	downstream	ENSG00000236179	NA	NA	NA	NA	NA	1p36.21	NA	NA	NA	NA	rs57674869	0.11	0.11	0.114	0.167532	0.0915	0.0546	0.0735	0.2663	0.2955	0.09	0.04	0.07	0.26	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.386826	NA	NA	NA	NA	NA	0.145	NA	3.4085
1311	1	64680682	64680682	C	G	intronic	UBE2U	NA	NA	NA	intronic	ENSG00000177414	NA	NA	NA	NA	NA	1p31.3	NA	NA	NA	NA	rs825174	0.71	0.71	0.69	0.746805	0.5915	0.7034	0.6571	0.9781	0.7025	0.59	0.68	0.64	0.97	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.995655	NA	NA	NA	NA	NA	0.601	NA	3.4085
1311	5	149513072	149513072	A	G	intronic	PDGFRB	NA	NA	NA	intronic	ENSG00000113721	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs2240780	0.56	0.56	0.534	0.560503	0.5915	0.5913	0.6023	0.4705	0.589	0.59	0.56	0.58	0.5	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.757325	NA	NA	NA	NA	NA	0.457	NA	3.4085
1311	19	50519231	50519231	T	C	intronic	VRK3	NA	NA	NA	intronic	ENSG00000105053	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs1469694	0.27	0.27	0.277	0.255791	0.1809	0.3403	0.1744	0.3843	0.1299	0.19	0.33	0.2	0.4	0.2113	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.263445	NA	NA	0.199302	0.332955	NA	0.232	NA	3.408498
1311	15	25415809	25415809	C	T	upstream	SNORD115-1	NA	NA	NA	ncRNA_exonic	ENSG00000224078	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs2739838	0.73	0.73	0.687	0.712061	0.7584	0.998	0.8127	0.2458	0.9284	0.76	1	0.8	0.3	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.385505	NA	NA	NA	NA	NA	0.659	NA	3.4082666
1311	1	157668427	157668427	G	A	intronic	FCRL3	NA	NA	NA	intronic	ENSG00000160856	NA	NA	NA	NA	NA	1q23.1	NA	NA	NA	NA	rs12140725	0.17	0.17	0.159	0.141374	0.2058	0.1954	0.1729	0.0567	0.1115	0.21	0.2	0.19	0.08	0.1841	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.462213	NA	NA	0.20186	0.087154	NA	0.116	NA	3.40824
1311	1	6194347	6194347	T	G	intronic	CHD5	NA	NA	NA	intronic	ENSG00000116254	NA	NA	NA	NA	NA	1p36.31	NA	NA	NA	NA	rs3765452	0.33	0.33	0.307	0.33726	0.17	0.6438	0.1599	0.3449	0.3088	0.17	0.66	0.19	0.31	0.2461	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.062697	NA	NA	0.175814	0.318883	NA	0.167	NA	3.408086
1311	4	66960186	66960186	T	C	intergenic	LOC100144602,CENPC1	dist=401082;dist=1377803	NA	NA	ncRNA_exonic	ENSG00000236562	NA	NA	NA	NA	NA	4q13.2	NA	NA	NA	NA	rs2726292	0.64	0.64	0.539	0.636182	0.5924	0.7837	0.6657	0.5166	0.6697	0.59	0.77	0.67	0.54	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.180805	NA	1	NA	NA	NA	0.594	NA	3.4076
1311	5	147497932	147497932	T	C	intronic	SPINK5	NA	NA	NA	intronic	ENSG00000133710	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs3777135	0.49	0.49	0.48	0.489816	0.5924	0.4841	0.6369	0.3162	0.5204	0.56	0.46	0.59	0.36	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.632353	NA	NA	NA	NA	NA	0.471	NA	3.4076
1311	9	139405501	139405501	A	G	intronic	NOTCH1	NA	NA	NA	intronic	ENSG00000148400	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs9411206	0.75	0.75	0.735	0.750399	0.5924	0.8978	0.634	0.9448	0.5808	0.58	0.87	0.66	0.95	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.384407	NA	NA	NA	NA	NA	0.717	NA	3.4076
1311	11	49854707	49854707	A	C	intergenic	LOC440040,OR4C13	dist=22738;dist=119236	NA	NA	ncRNA_exonic	ENSG00000219061	NA	NA	NA	NA	NA	11p11.12	NA	NA	NA	NA	rs1829951	0.5	0.5	0.455	0.492212	0.5924	0.5575	0.6326	0.2912	0.4939	0.59	0.53	0.63	0.21	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.586467	NA	0.31	NA	NA	NA	0.058	NA	3.4076
1311	11	49920594	49920594	C	T	intergenic	LOC440040,OR4C13	dist=88625;dist=53349	NA	NA	ncRNA_exonic	ENSG00000254408	NA	NA	NA	NA	NA	11p11.12	NA	NA	NA	NA	rs847637	0.5	0.5	0.481	0.492212	0.5924	0.5565	0.634	0.2912	0.4939	0.59	0.55	0.64	0.21	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.595501	NA	NA	NA	NA	ID=COSN163934;OCCURENCE=1(breast)	0.5	NA	3.4076
1311	11	119185133	119185133	C	T	intronic	MCAM	NA	NA	NA	intronic	ENSG00000076706	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs6589731	0.49	0.49	0.442	0.483626	0.5924	0.4028	0.6427	0.4039	0.4499	0.58	0.39	0.61	0.39	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.816896	NA	NA	NA	NA	NA	0.377	NA	3.4076
1311	16	8851767	8851767	C	T	intronic	ABAT	NA	NA	NA	intronic	ENSG00000183044	NA	NA	NA	NA	NA	16p13.2	NA	NA	NA	NA	rs12930438	0.53	0.53	0.5	0.492812	0.5924	0.5813	0.621	0.264	0.5174	0.61	0.59	0.61	0.26	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.253389	1.253389	NA	NA	NA	NA	0.514	NA	3.4076
1311	16	77395948	77395948	C	G	intronic	ADAMTS18	NA	NA	NA	intronic	ENSG00000140873	NA	NA	NA	NA	NA	16q23.1	NA	NA	NA	NA	rs1909802	0.48	0.48	0.511	0.46885	0.5924	0.3294	0.3271	0.497	0.5481	0.61	0.31	0.39	0.53	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.435001	NA	NA	NA	NA	NA	0.565	NA	3.4076
1311	19	41928765	41928765	C	T	intronic	BCKDHA	NA	NA	NA	intronic	ENSG00000248098,ENSG00000255730	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs284655	0.61	0.61	0.633	0.614018	0.5924	0.4325	0.4885	0.8457	0.5992	0.58	0.46	0.57	0.85	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.031062	NA	NA	NA	NA	NA	0.688	NA	3.4076
1311	12	56088773	56088773	C	T	intronic	ITGA7	NA	NA	NA	intronic	ENSG00000135424	NA	NA	NA	NA	NA	12q13.2	NA	NA	NA	NA	rs2293410	0.58	0.58	0.525	0.589257	0.495	0.9296	0.6196	0.2716	0.7434	0.51	0.92	0.57	0.3	0.59	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.540674	NA	NA	0.507674	0.301861	NA	0.522	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000079981.1;CLNDSDB=.;CLNDSDBID=.	3.407326
1311	14	23312869	23312869	G	T	intronic	MMP14	NA	NA	NA	intronic	ENSG00000157227	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs2236305	0.25	0.25	0.254	0.250399	0.1879	0.3552	0.1571	0.2685	0.2485	0.17	0.37	0.17	0.29	0.2083	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.667242	NA	NA	0.196744	0.253972	NA	0.239	NA	3.407056
1311	1	150483840	150483840	C	T	intronic	ECM1	NA	NA	NA	intronic	ENSG00000143369	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs4970979	0.52	0.52	0.53	0.466254	0.5934	0.2976	0.4856	0.5741	0.3497	0.61	0.33	0.54	0.58	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.358262	NA	NA	NA	NA	NA	0.594	NA	3.4066
1311	2	219510768	219510768	A	G	intronic	ZNF142	NA	NA	NA	intronic	ENSG00000115568	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs4674320	0.53	0.53	0.468	0.516973	0.5934	0.8214	0.5879	0.0711	0.6769	0.6	0.79	0.6	0.07	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.776831	NA	NA	NA	NA	NA	0.37	NA	3.4066
1311	6	152523143	152523143	G	A	intronic	SYNE1	NA	NA	NA	intronic	ENSG00000131018	NA	NA	NA	NA	NA	6q25.2	NA	NA	NA	NA	rs2635441	0.64	0.64	0.31	0.645567	0.5934	0.626	0.7176	0.6793	0.6227	0.57	0.64	0.67	0.7	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.156406	NA	NA	NA	NA	NA	0.58	NA	3.4066
1311	7	152549107	152549107	C	T	intronic	ACTR3B	NA	NA	NA	intronic	ENSG00000133627	NA	NA	NA	NA	NA	7q36.1	NA	NA	NA	NA	rs6944646	0.55	0.55	0.513	0.520567	0.5934	0.6637	0.7003	0.2481	0.5389	0.59	0.66	0.69	0.27	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.114763	NA	NA	NA	NA	NA	0.442	NA	3.4066
1311	8	143957886	143957886	A	C	intronic	CYP11B1	NA	NA	NA	intronic	ENSG00000104499,ENSG00000160882	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs10105643	0.72	0.72	0.721	0.759385	0.5934	0.8472	0.6787	0.8941	0.7147	0.58	0.84	0.64	0.87	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.05958	NA	NA	NA	NA	NA	0.739	NA	3.4066
1311	22	37494420	37494420	T	C	intronic	TMPRSS6	NA	NA	NA	intronic	ENSG00000187045	NA	NA	NA	NA	NA	22q12.3	NA	NA	NA	NA	rs732756	0.16	0.16	0.156	0.13758	0.1899	0.1796	0.1182	0.0756	0.138	0.2	0.2	0.14	0.08	0.1839	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.168766	NA	NA	0.219651	0.089877	NA	0.159	NA	3.406549
1311	20	37654024	37654024	T	G	intronic	DHX35	NA	NA	NA	intronic	ENSG00000101452	NA	NA	NA	NA	NA	20q12	NA	NA	NA	NA	rs3752301	0.17	0.17	0.167	0.163738	0.2177	0.1468	0.1513	0.09	0.2342	0.22	0.14	0.16	0.12	0.179	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.108752	NA	NA	0.197093	0.115978	NA	0.145	NA	3.406207
1311	3	197432063	197432063	T	C	intronic	KIAA0226	NA	NA	NA	intronic	ENSG00000145016	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs58507505	0.21	0.21	0.235	0.211062	0.2197	0.1052	0.1182	0.3873	0.1391	0.21	0.12	0.13	0.38	0.1832	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.968727	NA	NA	0.191303	0.339418	NA	0.283	NA	3.405797
1311	19	7624079	7624079	G	A	intronic	PNPLA6	NA	NA	NA	intronic	ENSG00000032444	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs538852	0.25	0.25	0.248	0.264976	0.1928	0.2242	0.2478	0.3979	0.2137	0.19	0.24	0.23	0.37	0.2106	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.524516	NA	NA	0.190814	0.369042	NA	0.268	NA	3.405786
1311	1	150483236	150483236	A	C	intronic	ECM1	NA	NA	NA	intronic	ENSG00000143369	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs9661040	0.55	0.55	0.564	0.505791	0.5944	0.2966	0.5014	0.7126	0.3538	0.61	0.33	0.56	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.051738	NA	NA	NA	NA	NA	0.63	NA	3.4056
1311	7	50694457	50694457	A	G	intronic	GRB10	NA	NA	NA	intronic	ENSG00000106070	NA	NA	NA	NA	NA	7p12.1	NA	NA	NA	NA	rs1468450	0.64	0.64	0.647	0.65615	0.5944	0.4444	0.5764	0.9652	0.5767	0.59	0.45	0.58	0.96	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.654242	NA	NA	NA	NA	ID=COSN168055;OCCURENCE=1(large_intestine),1(endometrium)	0.645	NA	3.4056
1311	12	42305334	42305334	C	G	intergenic	PDZRN4,GXYLT1	dist=336942;dist=170314	NA	NA	ncRNA_intronic	ENSG00000257128,ENSG00000257239	NA	NA	NA	NA	NA	12q12	NA	NA	NA	NA	rs722217	0.36	0.36	0.3	0.346046	0.5944	0.1776	0.4914	0.0832	0.5164	0.61	0.17	0.52	0.08	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.783897	NA	NA	NA	NA	NA	0.362	NA	3.4056
1311	16	5127721	5127721	G	T	intronic	ALG1	NA	NA	NA	intronic	ENSG00000033011	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs2302552	0.61	0.61	0.59	0.660942	0.5944	0.7133	0.5922	0.5953	0.8129	0.59	0.71	0.56	0.57	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.555695	NA	NA	NA	NA	NA	0.543	NA	3.4056
1311	16	5416051	5416051	T	C	intergenic	FAM86A,RBFOX1	dist=268262;dist=653081	NA	NA	ncRNA_exonic	ENSG00000261007	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs11865528	0.54	0.54	0.525	0.551318	0.5944	0.375	0.5533	0.6445	0.5613	0.59	0.4	0.58	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.462413	NA	NA	NA	NA	NA	0.58	NA	3.4056
1311	18	74971219	74971219	G	A	intronic	GALR1	NA	NA	NA	intronic	ENSG00000166573	NA	NA	NA	NA	NA	18q23	NA	NA	NA	NA	rs189710445	NA	NA	0.504	0.509585	0.5944	0.4643	0.5893	0.3729	0.5971	NA	NA	NA	NA	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.91494	NA	NA	NA	NA	NA	0.145	NA	3.4056
1311	22	42390225	42390225	C	G	intronic	SEPT3	NA	NA	NA	intronic	ENSG00000100167	NA	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs7290655	0.25	0.25	0.23	0.260982	0.2793	0.0585	0.3876	0.3472	0.2444	0.28	0.05	0.42	0.32	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.20096	NA	NA	0.315211	0.325867	NA	0.457	NA	3.405489
1311	7	149507964	149507964	C	T	intronic	SSPO	NA	NA	NA	ncRNA_intronic	ENSG00000197558	NA	NA	NA	NA	NA	7q36.1	NA	NA	NA	NA	rs55776327	0.39	0.39	0.358	0.389577	0.2932	0.4097	0.3703	0.525	0.2986	0.28	0.41	0.39	0.53	0.334	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.565213	NA	NA	0.301008	0.488161	NA	0.348	NA	3.4051253
1311	12	56096816	56096816	T	C	intronic	ITGA7	NA	NA	NA	intronic	ENSG00000135424	NA	NA	NA	NA	NA	12q13.2	NA	NA	NA	NA	rs2293413	0.6	0.6	0.539	0.612021	0.494	0.9296	0.6282	0.351	0.7474	0.51	0.92	0.59	0.38	0.5902	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.335326	NA	NA	0.510698	0.371993	NA	0.543	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000079988.1;CLNDSDB=.;CLNDSDBID=.	3.405102
1312	12	7069425	7069425	G	C	intronic	PTPN6	NA	NA	NA	intronic	ENSG00000111679	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs28579154	0.57	0.57	NA	NA	NA	NA	NA	NA	NA	0.61	0.65	0.55	0.43	0.5952	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.716066	NA	NA	NA	NA	NA	0.428	NA	3.4048
1312	3	119534153	119534153	C	T	intronic	NR1I2	NA	NA	NA	intronic	ENSG00000144852	NA	NA	NA	NA	NA	3q13.33	NA	NA	NA	NA	rs2276707	0.3	0.3	0.275	0.319688	0.167	0.4663	0.1859	0.4175	0.2883	0.17	0.47	0.2	0.38	0.2442	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.92141	NA	NA	0.18407	0.356332	NA	0.254	NA	3.40473
1312	11	71527895	71527895	C	T	intergenic	ALG1L9P,DEFB108B	dist=2990;dist=16351	NA	NA	ncRNA_exonic	ENSG00000214534	NA	NA	NA	NA	NA	11q13.4	NA	NA	NA	NA	rs10898678	0.35	0.35	0.391	0.425319	0.5954	0.3651	0.3674	0.2526	0.5869	0.47	0.31	0.35	0.22	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.457581	NA	0.24	NA	NA	NA	NA	NA	3.4046
1312	1	168262299	168262299	C	T	intronic	TBX19	NA	NA	NA	intronic	ENSG00000143178	NA	NA	NA	NA	NA	1q24.2	NA	NA	NA	NA	rs7520743	0.42	0.42	0.431	0.369808	0.5954	0.4058	0.3501	0.202	0.3415	0.6	0.41	0.39	0.2	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.489103	NA	NA	NA	NA	NA	0.413	NA	3.4046
1312	2	141816731	141816731	C	T	intronic	LRP1B	NA	NA	NA	intronic	ENSG00000168702	NA	NA	NA	NA	NA	2q22.1	NA	NA	NA	NA	rs1525580	0.43	0.43	0.408	0.413139	0.5954	0.255	0.4625	0.3495	0.4397	0.58	0.26	0.47	0.37	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.44338	NA	NA	NA	NA	NA	0.399	NA	3.4046
1312	6	29961618	29961618	A	G	intergenic	HCG9,ZNRD1-AS1	dist=15441;dist=7170	NA	NA	downstream	ENSG00000224312,ENSG00000238024	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs9260974	0.19	0.19	0.2	0.191294	0.0954	0.1885	0.1744	0.2995	0.1585	0.09	0.2	0.2	0.3	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.940477	NA	NA	NA	NA	NA	0.167	NA	3.4046
1312	12	7942472	7942472	A	G	intronic	NANOG	NA	NA	NA	intronic	ENSG00000111704	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs12826131	0.38	0.38	NA	0.443091	0.5954	0.1438	0.5548	0.4168	0.5511	0.54	0.11	0.49	0.38	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.323884	NA	NA	NA	NA	NA	NA	NA	3.4046
1312	12	7942473	7942473	G	A	intronic	NANOG	NA	NA	NA	intronic	ENSG00000111704	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs12821706	NA	NA	NA	0.443091	0.5954	0.1438	0.5548	0.4168	0.5511	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.472836	1.472836	NA	NA	NA	NA	NA	NA	3.4046
1312	17	20015123	20015123	G	T	intronic	SPECC1	NA	NA	NA	intronic	ENSG00000128487	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs35602968	NA	NA	NA	0.465056	0.5954	0.2014	0.5231	0.6256	0.3446	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.95463	NA	NA	NA	NA	NA	NA	NA	3.4046
1312	4	7820795	7820795	G	A	intronic	AFAP1	NA	NA	NA	intronic	ENSG00000196526	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs35726835	0.12	0.12	0.106	0.0932508	0.2157	0.0536	0.1153	0.034	0.0726	0.21	0.05	0.15	0.04	0.1669	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.391982	NA	NA	0.212907	0.059918	NA	0.123	NA	3.404493
1312	4	183674597	183674597	A	C	intronic	TENM3	NA	NA	NA	intronic	ENSG00000218336	NA	NA	NA	NA	NA	4q35.1	NA	NA	NA	NA	rs71620945	0.12	0.12	0.106	0.101038	0.2048	0.0357	0.1686	0.0295	0.1104	0.21	0.04	0.14	0.04	0.1725	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.276491	NA	NA	0.218453	0.067334	NA	0.072	NA	3.404247
1312	3	100567592	100567592	T	C	intronic	ABI3BP	NA	NA	NA	intronic	ENSG00000154175	NA	NA	NA	NA	NA	3q12.2	NA	NA	NA	NA	rs6773877	0.29	0.29	0.258	0.317692	0.3022	0.0784	0.3573	0.4788	0.3344	0.32	0.09	0.31	0.45	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.285439	NA	NA	0.294155	0.437139	NA	0.29	NA	3.403645
1312	2	240085674	240085674	C	T	intronic	HDAC4	NA	NA	NA	intronic	ENSG00000068024	NA	NA	NA	NA	NA	2q37.3	NA	NA	NA	NA	rs13010577	0.42	0.42	0.411	0.469249	0.5964	0.2808	0.3314	0.4213	0.6953	0.59	0.27	0.37	0.4	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.147397	NA	NA	NA	NA	NA	0.391	NA	3.4036
1312	11	7439093	7439093	G	T	intronic	SYT9	NA	NA	NA	intronic	ENSG00000170743	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs4757993	0.4	0.4	0.39	0.36861	0.5964	0.1905	0.4294	0.2579	0.4243	0.58	0.21	0.48	0.29	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.034174	NA	NA	NA	NA	NA	0.29	NA	3.4036
1312	16	24881192	24881192	C	A	intronic	SLC5A11	NA	NA	NA	intronic	ENSG00000158865	NA	NA	NA	NA	NA	16p12.1	NA	NA	NA	NA	rs2667751	0.13	0.13	0.115	0.120807	0.2207	0.0169	0.1441	0.1089	0.1247	0.21	0.02	0.17	0.11	0.1698	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.512177	NA	NA	0.20593	0.130405	NA	0.196	NA	3.40357
1312	2	152409809	152409809	C	A	intronic	NEB	NA	NA	NA	intronic	ENSG00000183091	NA	NA	NA	NA	NA	2q23.3	NA	NA	NA	NA	rs4575719	0.56	0.56	0.525	0.494609	0.5974	0.5496	0.647	0.4009	0.3507	0.58	0.6	0.64	0.43	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.821887	NA	NA	NA	NA	NA	0.551	NA	3.4026
1312	17	61829989	61829989	C	T	intronic	CCDC47	NA	NA	NA	intronic	ENSG00000108588	NA	NA	NA	NA	NA	17q23.3	NA	NA	NA	NA	rs3785572	0.68	0.68	0.692	0.726238	0.5974	0.5565	0.6772	0.9569	0.7566	0.6	0.59	0.63	0.96	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.511489	NA	NA	NA	NA	NA	0.681	NA	3.4026
1312	19	7970635	7970635	A	G	intronic	MAP2K7	NA	NA	NA	intronic	ENSG00000076984	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs4804833	0.56	0.56	0.522	0.541933	0.5974	0.5704	0.647	0.4319	0.5297	0.59	0.58	0.61	0.46	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.259687	NA	NA	NA	NA	NA	0.5	NA	3.4026
1312	20	40979160	40979160	T	C	intronic	PTPRT	NA	NA	NA	intronic	ENSG00000196090	NA	NA	NA	NA	NA	20q12	NA	NA	NA	NA	rs2071854	0.71	0.71	0.712	0.728235	0.5974	0.9067	0.7248	0.7042	0.7137	0.6	0.9	0.67	0.71	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.546819	NA	NA	NA	NA	NA	0.746	NA	3.4026
1312	4	83411197	83411197	T	C	intronic	TMEM150C	NA	NA	NA	intronic	ENSG00000249242	NA	NA	NA	NA	NA	4q21.22	NA	NA	NA	NA	rs2276884	0.19	0.19	0.194	0.168331	0.2028	0.1389	0.2046	0.2005	0.0941	0.2	0.15	0.22	0.22	0.1963	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.511632	1.511632	NA	0.198588	0.174548	NA	0.13	NA	3.402312
1312	19	58956888	58956888	A	G	intergenic	ZNF132,ZNF324B	dist=5299;dist=6083	NA	NA	ncRNA_exonic	ENSG00000269473	NA	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs12972898	0.14	0.14	0.149	0.136581	0.2306	0.0546	0.17	0.0908	0.1626	0.22	0.06	0.18	0.1	0.1746	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.090535	NA	NA	0.192617	0.10274	NA	0.159	NA	3.402183
1312	16	1720844	1720844	A	G	intronic	CRAMP1L	NA	NA	NA	intronic	ENSG00000007545,ENSG00000261732	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs2272893	0.37	0.37	0.358	0.415535	0.161	0.5298	0.3213	0.5991	0.3783	0.15	0.52	0.3	0.61	0.2735	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.803952	NA	NA	0.163471	0.508797	NA	0.304	NA	3.402029
1312	1	111922854	111922854	G	A	intergenic	PIFO,PGCP1	dist=27215;dist=4287	NA	NA	upstream	ENSG00000236012	NA	NA	NA	NA	NA	1p13.2	NA	NA	NA	NA	rs12035026	0.13	0.13	0.126	0.145168	0.0984	0.3343	0.0706	0.0182	0.2229	0.1	0.32	0.07	0.01	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.56939	NA	NA	NA	NA	NA	0.08	NA	3.4016
1312	4	9707740	9707740	G	A	intergenic	MIR548I2,DRD5	dist=149803;dist=75518	NA	NA	ncRNA_intronic	ENSG00000251087	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs13122952	0.49	0.49	0.421	0.417332	0.5984	0.372	0.4813	0.3056	0.3834	0.63	0.45	0.58	0.25	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.694171	NA	NA	NA	NA	NA	0.312	NA	3.4016
1312	6	76029760	76029760	G	A	intronic	FILIP1	NA	NA	NA	intronic	ENSG00000118407	NA	NA	NA	NA	NA	6q14.1	NA	NA	NA	NA	rs4275021	0.57	0.57	0.565	0.604832	0.5984	0.4712	0.5706	0.6762	0.6769	0.6	0.44	0.59	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.687692	NA	NA	NA	NA	NA	0.674	NA	3.4016
1312	9	95650107	95650107	A	G	intergenic	ZNF484,FGD3	dist=9787;dist=59494	NA	NA	ncRNA_exonic	ENSG00000226668	NA	NA	NA	NA	NA	9q22.31	NA	NA	NA	NA	rs7868874	0.71	0.71	0.713	0.718251	0.5984	0.748	0.6225	0.8638	0.682	0.59	0.77	0.67	0.85	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.727535	NA	NA	NA	NA	NA	0.696	NA	3.4016
1312	10	13231194	13231194	A	G	intronic	MCM10	NA	NA	NA	intronic	ENSG00000065328	NA	NA	NA	NA	NA	10p13	NA	NA	NA	NA	rs2296221	0.49	0.49	0.474	0.500599	0.5984	0.3611	0.5389	0.4448	0.592	0.6	0.33	0.56	0.46	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.742847	NA	NA	NA	NA	NA	0.464	NA	3.4016
1312	10	103588734	103588734	A	G	intronic	KCNIP2	NA	NA	NA	intronic	ENSG00000120049	NA	NA	NA	NA	NA	10q24.32	NA	NA	NA	NA	rs1562364	0.62	0.62	0.569	0.541933	0.5984	0.75	0.5317	0.441	0.4131	0.61	0.77	0.57	0.49	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.262879	NA	NA	NA	NA	NA	0.609	NA	3.4016
1312	17	61898135	61898135	C	A	intronic	FTSJ3	NA	NA	NA	intronic	ENSG00000108592	NA	NA	NA	NA	NA	17q23.3	NA	NA	NA	NA	rs2665836	0.66	0.66	0.59	0.732428	0.5984	0.5556	0.6801	0.9781	0.7577	0.58	0.55	0.61	0.95	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.708503	NA	NA	NA	NA	NA	0.659	NA	3.4016
1312	11	400109	400109	A	G	exonic	PKP3	NA	synonymous SNV	PKP3:NM_007183:exon6:c.A1416G:p.A472A	exonic	ENSG00000184363	NA	synonymous SNV	ENSG00000184363:ENST00000331563:exon6:c.A1416G:p.A472A	NA	NA	11p15.5	NA	NA	NA	NA	rs8858	0.86	0.86	0.858	0.897364	0.7475	0.998	0.7421	0.9811	0.9448	0.75	1	0.75	0.97	0.7928	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.90631	NA	NA	0.724836	0.93588	NA	0.768	NA	3.4015306
1312	1	1225959	1225959	C	G	intronic	SCNN1D	NA	NA	NA	intronic	ENSG00000162572	NA	NA	NA	NA	NA	1p36.33	NA	NA	NA	NA	rs1570867	0.52	0.52	0.455	0.56869	0.1243	0.877	0.4841	0.7148	0.5706	0.13	0.89	0.45	0.73	0.3432	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.212905	NA	NA	0.130997	0.62963	NA	0.435	NA	3.401503
1312	12	18747387	18747387	A	G	intronic	PIK3C2G	NA	NA	NA	intronic	ENSG00000139144	NA	NA	NA	NA	NA	12p12.3	NA	NA	NA	NA	rs12827507	0.16	0.16	0.161	0.160543	0.1829	0.1925	0.1945	0.0522	0.227	0.18	0.22	0.19	0.04	0.2211	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.68971	NA	NA	0.194568	0.073198	NA	0.196	NA	3.401432
1312	1	32207581	32207581	T	G	intronic	BAI2	NA	NA	NA	intronic	ENSG00000121753	NA	NA	NA	NA	NA	1p35.2	NA	NA	NA	NA	rs2297600	0.34	0.34	0.308	0.383187	0.163	0.2341	0.2651	0.7542	0.3456	0.18	0.21	0.28	0.76	0.2608	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.944984	NA	NA	0.174884	0.649569	NA	0.377	NA	3.401316
1312	19	45024875	45024875	T	C	intronic	CEACAM20	NA	NA	NA	ncRNA_intronic	ENSG00000176395	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs12975863	NA	NA	NA	0.898962	0.9324	0.6746	0.9798	0.9955	0.908	NA	NA	NA	NA	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.281136	NA	NA	NA	NA	NA	0.877	NA	3.4009333
1312	6	31382770	31382770	A	G	intronic	MICA	NA	NA	NA	ncRNA_intronic	ENSG00000206337	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs9266824	0.36	0.36	0.324	0.358227	0.3141	0.3006	0.4049	0.4554	0.2986	0.32	0.28	0.46	0.46	0.3293	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.512898	NA	NA	0.289126	0.398844	NA	0.312	NA	3.4008073
1312	14	75276079	75276079	C	G	intronic	YLPM1	NA	NA	NA	intronic	ENSG00000119596	NA	NA	NA	Score=523;Name=lod=178	NA	14q24.3	NA	NA	NA	NA	rs957345	0.47	0.47	0.456	0.439696	0.5378	0.5744	0.4885	0.3109	0.3395	0.53	0.53	0.49	0.3	0.5205	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.471078	NA	NA	0.540938	0.358968	NA	0.558	NA	3.400762
1312	16	23848762	23848762	G	A	intronic	PRKCB	NA	NA	NA	intronic	ENSG00000166501	NA	NA	NA	NA	NA	16p12.2	NA	Name=Pol2	NA	NA	rs3729883	0.47	0.47	0.444	0.439896	0.5567	0.6567	0.4135	0.1377	0.5235	0.57	0.62	0.47	0.15	0.5145	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.753956	1.753956	NA	0.52814	0.215976	NA	0.457	NA	3.40066
1312	5	32789852	32789852	T	C	UTR3	NPR3	NM_001204376:c.*3401T>C,NM_001204375:c.*3401T>C,NM_000908:c.*3401T>C	NA	NA	exonic	ENSG00000181495	NA	synonymous SNV	ENSG00000181495:ENST00000326958:exon1:c.T345C:p.N115N	NA	NA	5p13.3	NA	NA	NA	NA	rs1173756	0.61	0.61	0.616	0.625998	0.508	0.6637	0.5418	0.7526	0.5971	0.52	0.64	0.53	0.76	0.566	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.161074	NA	NA	0.525349	0.726736	NA	0.572	NA	3.400651
1312	1	211452728	211452728	G	A	intronic	RCOR3	NA	NA	NA	intronic	ENSG00000117625	NA	NA	NA	NA	NA	1q32.2	NA	NA	NA	NA	rs3767378	0.51	0.51	0.477	0.456669	0.5994	0.62	0.5764	0.1475	0.4744	0.6	0.63	0.6	0.16	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.097897	NA	NA	NA	NA	NA	0.435	NA	3.4006
1312	2	74143990	74143990	T	A	intronic	ACTG2	NA	NA	NA	intronic	ENSG00000163017	NA	NA	NA	NA	NA	2p13.1	NA	NA	NA	NA	rs1622752	0.48	0.48	0.439	0.470248	0.5994	0.5139	0.5461	0.2307	0.5624	0.61	0.53	0.52	0.2	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.772894	NA	NA	NA	NA	NA	0.457	NA	3.4006
1312	4	76721705	76721705	C	G	intronic	USO1	NA	NA	NA	intronic	ENSG00000138768	NA	NA	NA	NA	NA	4q21.1	NA	NA	NA	NA	rs2271472	0.61	0.61	0.556	0.561701	0.5994	0.7966	0.6513	0.3245	0.5378	0.61	0.83	0.68	0.32	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.510342	NA	NA	NA	NA	NA	0.543	NA	3.4006
1312	9	14740300	14740300	A	G	intronic	FREM1	NA	NA	NA	intronic	ENSG00000164946	NA	NA	NA	NA	NA	9p22.3	NA	NA	NA	NA	rs2270528	0.63	0.63	0.613	0.599241	0.5994	0.7817	0.6311	0.4879	0.5389	0.59	0.79	0.62	0.49	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.695246	NA	NA	NA	NA	NA	0.565	NA	3.4006
1312	12	125437236	125437236	A	G	intronic	DHX37	NA	NA	NA	intronic	ENSG00000150990	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs6488960	0.63	0.63	0.574	0.65615	0.5994	0.8462	0.6571	0.4448	0.8037	0.59	0.84	0.64	0.42	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.424889	NA	NA	NA	NA	NA	0.5	NA	3.4006
1312	17	61878144	61878144	G	A	intronic	DDX42	NA	NA	NA	intronic	ENSG00000198231	NA	NA	NA	NA	NA	17q23.3	NA	NA	NA	NA	rs2597634	0.68	0.68	0.692	0.732428	0.5994	0.5546	0.6816	0.9781	0.7566	0.6	0.58	0.64	0.97	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.897238	NA	NA	NA	NA	NA	0.681	NA	3.4006
1312	11	85718641	85718641	T	C	intronic	PICALM	NA	NA	NA	intronic	ENSG00000073921	NA	NA	NA	NA	NA	11q14.2	NA	NA	NA	NA	rs10792821	0.25	0.25	0.251	0.232029	0.1948	0.4643	0.2118	0.0961	0.229	0.21	0.45	0.19	0.12	0.2125	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.302845	NA	NA	0.192415	0.123695	NA	0.174	NA	3.400285
1312	2	209030578	209030578	A	G	intronic	C2orf80	NA	NA	NA	intronic	ENSG00000188674	NA	NA	NA	NA	NA	2q34	NA	NA	NA	NA	rs796281	0.32	0.32	0.289	0.305312	0.1819	0.5169	0.3948	0.2428	0.2352	0.19	0.54	0.35	0.24	0.2499	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.445075	2.445075	NA	0.167931	0.232017	NA	0.239	NA	3.400269
1312	11	59190499	59190499	T	C	upstream	OR5A2	NA	NA	NA	upstream	ENSG00000172324	NA	NA	NA	NA	NA	11q12.1	NA	NA	NA	NA	rs11602535	0.22	0.22	0.211	0.1877	0.2664	0.121	0.1585	0.2103	0.1656	0.28	0.13	0.19	0.25	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.10138	NA	NA	NA	NA	NA	0.159	NA	3.4002666
1312	19	34985466	34985466	C	T	intronic	WTIP	NA	NA	NA	intronic	ENSG00000142279	NA	NA	NA	Score=300;Name=lod=22	NA	19q13.11	NA	NA	NA	NA	rs11671685	0.31	0.31	0.285	0.302117	0.5666	0.1498	0.3775	0.056	0.4663	0.55	0.13	0.41	0.07	0.4681	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.657491	3.657491	NA	0.565186	0.133467	NA	0.428	NA	3.400114
1312	12	109723079	109723079	T	C	intronic	FOXN4	NA	NA	NA	intronic	ENSG00000139445	NA	NA	NA	NA	NA	12q24.11	NA	NA	NA	NA	rs10774644	NA	NA	NA	0.420727	0.4493	0.5655	0.3646	0.2655	0.4918	NA	NA	NA	NA	0.1507	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.623425	NA	NA	NA	NA	NA	0.007	NA	3.4
1312	5	52223516	52223516	C	A	intronic	ITGA1	NA	NA	NA	intronic	ENSG00000213949	NA	NA	NA	NA	NA	5q11.2	NA	NA	NA	NA	rs10038773	0.23	0.23	0.235	0.28135	0.1839	0.2252	0.1398	0.3926	0.3896	0.19	0.17	0.17	0.39	0.2226	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.157611	NA	NA	0.193605	0.354063	NA	0.326	NA	3.399895
1312	22	26157144	26157144	A	G	intronic	MYO18B	NA	NA	NA	intronic	ENSG00000133454	NA	NA	NA	NA	NA	22q12.1	NA	NA	NA	NA	rs17623980	0.19	0.19	0.181	0.180312	0.2018	0.13	0.2118	0.2231	0.1299	0.21	0.12	0.2	0.25	0.1919	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.676386	NA	NA	0.206483	0.209797	NA	0.152	NA	3.399817
1312	9	85913590	85913590	A	G	intronic	FRMD3	NA	NA	NA	intronic	ENSG00000172159	NA	NA	NA	NA	NA	9q21.32	NA	NA	NA	NA	rs11140011	0.52	0.52	0.485	0.482628	0.6004	0.6488	0.5447	0.1392	0.6104	0.61	0.62	0.56	0.21	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.355871	NA	NA	NA	NA	NA	0.333	NA	3.3996
1312	10	81318820	81318820	G	A	intronic	SFTPA2	NA	NA	NA	intronic	ENSG00000185303	NA	NA	NA	NA	NA	10q22.3	NA	NA	NA	NA	rs17880349	0.54	0.54	0.511	0.517971	0.6004	0.5327	0.5706	0.4516	0.4703	0.6	0.54	0.53	0.45	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.726852	NA	NA	NA	NA	NA	0.5	NA	3.3996
1312	22	32463875	32463875	G	A	intronic	SLC5A1	NA	NA	NA	intronic	ENSG00000100170	NA	NA	NA	NA	NA	22q12.3	NA	NA	NA	NA	rs135110	0.58	0.58	0.538	0.532548	0.6004	0.8452	0.6859	0.1112	0.6012	0.61	0.86	0.67	0.13	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.443096	1.443096	NA	NA	NA	NA	0.5	NA	3.3996
1312	12	23737566	23737566	G	A	intronic	SOX5	NA	NA	NA	intronic	ENSG00000134532	NA	NA	NA	NA	NA	12p12.1	NA	NA	NA	NA	rs11046992	0.24	0.24	0.21	0.230431	0.3161	0.3204	0.1671	0.0726	0.3078	0.31	0.3	0.2	0.09	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.596552	NA	NA	0.284727	0.109104	NA	0.174	NA	3.399173
1312	17	5042346	5042346	C	A	intronic	USP6	NA	NA	NA	UTR5;UTR3	ENSG00000129204;ENSG00000129204	ENST00000304328:c.-4C>A;ENST00000575709:c.*28C>A	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs11870506	0.31	0.31	0.268	0.350439	0.2187	0.6032	0.2738	0.0711	0.6575	0.23	0.62	0.27	0.09	0.367	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.151187	NA	NA	0.182161	0.083716	NA	0.225	NA	3.3988057
1312	4	44712908	44712908	T	C	intronic	GNPDA2	NA	NA	NA	intronic	ENSG00000163281	NA	NA	NA	NA	NA	4p12	NA	NA	NA	NA	rs3749582	0.47	0.47	0.447	0.440096	0.6014	0.4018	0.5202	0.289	0.4611	0.62	0.4	0.53	0.29	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.026005	NA	NA	NA	NA	ID=COSN167191;OCCURENCE=1(large_intestine)	0.616	NA	3.3986
1312	4	44720248	44720248	T	A	intronic	GNPDA2	NA	NA	NA	intronic	ENSG00000163281	NA	NA	NA	NA	NA	4p12	NA	NA	NA	NA	rs3792705	0.47	0.47	0.417	0.440096	0.6014	0.4018	0.5202	0.289	0.4611	0.62	0.4	0.53	0.29	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.524516	NA	NA	NA	NA	NA	0.587	NA	3.3986
1312	5	33643308	33643308	A	T	intronic	ADAMTS12	NA	NA	NA	intronic	ENSG00000151388	NA	NA	NA	NA	NA	5p13.3	NA	NA	NA	NA	rs10065974	0.58	0.58	0.556	0.540335	0.6014	0.7153	0.6052	0.3585	0.4969	0.59	0.71	0.62	0.37	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.657096	NA	NA	NA	NA	NA	0.478	NA	3.3986
1312	5	33643395	33643395	A	T	intronic	ADAMTS12	NA	NA	NA	intronic	ENSG00000151388	NA	NA	NA	NA	NA	5p13.3	NA	NA	NA	NA	rs10066043	0.58	0.58	0.562	0.540335	0.6014	0.7153	0.6052	0.3585	0.4969	0.59	0.71	0.62	0.37	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.950563	NA	NA	NA	NA	NA	0.478	NA	3.3986
1312	8	56316340	56316340	C	T	intronic	XKR4	NA	NA	NA	intronic	ENSG00000206579	NA	NA	NA	NA	NA	8q12.1	NA	NA	NA	NA	rs2658918	0.45	0.45	0.42	0.408347	0.6014	0.4643	0.428	0.143	0.4969	0.61	0.47	0.49	0.16	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.768574	NA	NA	NA	NA	NA	0.29	NA	3.3986
1312	8	142231944	142231944	G	A	intronic	SLC45A4	NA	NA	NA	intronic	ENSG00000022567	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs6983780	0.69	0.69	0.17	0.691094	0.6014	0.8175	0.5793	0.7595	0.6401	0.57	0.81	0.64	0.76	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.42095	NA	NA	NA	NA	NA	NA	NA	3.3986
1312	8	142231945	142231945	C	G	intronic	SLC45A4	NA	NA	NA	intronic	ENSG00000022567	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs59172574	0.69	0.69	0.19	0.691094	0.6014	0.8175	0.5793	0.7595	0.6401	0.57	0.81	0.65	0.76	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.021187	NA	NA	NA	NA	NA	NA	NA	3.3986
1312	11	64707978	64707978	A	G	intronic	C11orf85	NA	NA	NA	intronic	ENSG00000168070	NA	NA	NA	NA	NA	11q13.1	NA	NA	NA	NA	rs586616	0.35	0.35	0.322	0.302716	0.6014	0.1815	0.3012	0.1891	0.2751	0.6	0.16	0.36	0.16	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.084749	NA	NA	NA	NA	NA	0.326	NA	3.3986
1312	14	90729565	90729565	G	T	intronic	PSMC1	NA	NA	NA	intronic	ENSG00000100764	NA	NA	NA	NA	NA	14q32.11	NA	NA	NA	NA	rs4904663	0.53	0.53	0.51	0.52516	0.6014	0.4812	0.6398	0.3918	0.591	0.59	0.48	0.61	0.42	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.880628	NA	NA	NA	NA	NA	0.522	NA	3.3986
1312	14	90729931	90729931	T	C	intronic	PSMC1	NA	NA	NA	intronic	ENSG00000100764	NA	NA	NA	NA	NA	14q32.11	NA	NA	NA	NA	rs8022531	0.53	0.53	0.496	0.52516	0.6014	0.4812	0.6398	0.3918	0.591	0.59	0.48	0.61	0.42	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.23201	NA	NA	NA	NA	NA	0.514	NA	3.3986
1312	14	90730265	90730265	G	A	intronic	PSMC1	NA	NA	NA	intronic	ENSG00000100764	NA	NA	NA	NA	NA	14q32.11	NA	NA	NA	NA	rs2282030	0.53	0.53	0.513	0.52476	0.6014	0.4812	0.6383	0.3911	0.591	0.59	0.48	0.61	0.42	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.132814	NA	NA	NA	NA	NA	0.522	NA	3.3986
1312	1	39766041	39766041	A	G	intronic	MACF1	NA	NA	NA	intronic	ENSG00000127603	NA	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	rs41270803	0.15	0.15	0.137	0.121605	0.1938	0.1706	0.2061	0.0144	0.0818	0.19	0.17	0.21	0.02	0.1869	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.712846	NA	NA	0.220814	0.044031	NA	0.109	NA	3.398486
1312	12	110874504	110874504	T	A	intronic	ARPC3	NA	NA	NA	ncRNA_intronic	ENSG00000258210	NA	NA	NA	NA	NA	12q24.11	NA	NA	NA	NA	rs201277439	0.41	0.41	0.068	0.440495	0.4503	0.4365	0.3746	0.5189	0.3753	0.42	0.44	0.34	0.42	0.3722	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.032594	NA	NA	0.112835	0.152164	NA	NA	NA	3.3979983
1312	1	39815344	39815344	G	A	intronic	MACF1	NA	NA	NA	intronic	ENSG00000127603	NA	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	rs41270811	0.15	0.15	0.131	0.117812	0.1948	0.1577	0.2046	0.0121	0.0787	0.19	0.16	0.21	0.02	0.1851	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.554626	NA	NA	0.222209	0.044031	NA	0.109	NA	3.397891
1312	3	46482861	46482861	G	A	intronic	LTF	NA	NA	NA	intronic	ENSG00000012223	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs34000233	0.19	0.19	0.184	0.196086	0.2137	0.2639	0.1729	0.0764	0.2863	0.22	0.26	0.16	0.09	0.2019	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.624243	NA	NA	0.186569	0.096913	NA	0.159	NA	3.397831
1312	6	159204786	159204786	C	T	intronic	EZR	NA	NA	NA	intronic	ENSG00000092820	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs3123111	0.42	0.42	0.413	0.415136	0.6024	0.2063	0.3545	0.3918	0.5123	0.61	0.17	0.42	0.39	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.412263	NA	NA	NA	NA	NA	0.449	NA	3.3976
1312	10	27461953	27461953	T	A	intronic	MASTL	NA	NA	NA	intronic	ENSG00000120539	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs6482600	0.42	0.42	0.402	0.396765	0.6024	0.4375	0.4942	0.1293	0.4356	0.59	0.38	0.52	0.15	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.695966	NA	NA	NA	NA	NA	0.399	NA	3.3976
1312	18	50994208	50994208	G	T	intronic	DCC	NA	NA	NA	intronic	ENSG00000187323	NA	NA	NA	NA	NA	18q21.2	NA	NA	NA	NA	rs1502229	0.49	0.49	0.499	0.48742	0.6024	0.2609	0.3934	0.6989	0.3834	0.59	0.25	0.46	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.083817	NA	NA	NA	NA	NA	0.601	NA	3.3976
1312	9	22451031	22451031	G	A	intronic	DMRTA1	NA	NA	NA	intronic	ENSG00000176399	NA	NA	NA	NA	NA	9p21.3	NA	NA	NA	NA	rs563802	0.31	0.31	0.279	0.318091	0.1799	0.2282	0.3602	0.5227	0.2464	0.18	0.24	0.36	0.53	0.2358	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.15132	NA	NA	0.186744	0.500454	ID=COSN168492;OCCURENCE=1(large_intestine)	0.268	NA	3.397556
1312	2	209028191	209028191	C	T	intronic	CRYGA	NA	NA	NA	intronic	ENSG00000168582	NA	NA	NA	NA	NA	2q34	NA	NA	NA	NA	rs796280	0.32	0.32	0.281	0.294129	0.1849	0.5258	0.4078	0.1846	0.2352	0.2	0.56	0.36	0.2	0.2499	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.058028	NA	NA	0.167674	0.183613	NA	0.225	NA	3.397526
1312	11	94908658	94908658	G	T	intronic	SESN3	NA	NA	NA	ncRNA_intronic	ENSG00000245552	NA	NA	NA	NA	NA	11q21	NA	NA	NA	NA	rs11021065	0.26	0.26	0.222	0.257188	0.3201	0.2877	0.3199	0.146	0.2669	0.32	0.24	0.34	0.13	0.3035	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.355443	NA	NA	0.312471	0.186506	NA	0.37	NA	3.3972623
1312	10	103560186	103560186	A	C	intronic	MGEA5	NA	NA	NA	intronic	ENSG00000198408	NA	NA	NA	NA	NA	10q24.32	NA	NA	NA	NA	rs2305194	0.29	0.29	0.29	0.275559	0.1899	0.5089	0.1974	0.208	0.2699	0.18	0.54	0.24	0.22	0.2335	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.583833	NA	NA	0.179419	0.207217	NA	0.312	NA	3.397181
1312	1	39913351	39913351	A	G	intronic	MACF1	NA	NA	NA	intronic	ENSG00000127603	NA	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	rs2296173	0.15	0.15	0.129	0.11901	0.1958	0.1597	0.2061	0.0136	0.0787	0.2	0.16	0.21	0.02	0.1841	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.323095	NA	NA	0.222959	0.045847	NA	0.109	NA	3.397141
1312	19	39977173	39977173	G	A	intronic	TIMM50	NA	NA	NA	intronic	ENSG00000105197	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs8112528	0.17	0.17	0.165	0.186102	0.2018	0.0714	0.1744	0.211	0.2628	0.21	0.07	0.22	0.21	0.2049	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.623732	NA	NA	0.196279	0.200635	NA	0.13	NA	3.397021
1312	20	24959386	24959386	C	A	intronic	APMAP	NA	NA	NA	intronic	ENSG00000101474	NA	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	rs56312312	0.14	0.14	0.12	0.133387	0.2038	0.0635	0.1715	0.093	0.1605	0.2	0.08	0.2	0.11	0.2241	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.995642	NA	NA	0.175349	0.08965	NA	0.058	NA	3.396751
1312	10	61062538	61062538	T	C	intronic	FAM13C	NA	NA	NA	intronic	ENSG00000148541	NA	NA	NA	NA	NA	10q21.1	NA	NA	NA	NA	rs72808548	0.18	0.18	0.153	0.165535	0.2197	0.2619	0.1801	0.0227	0.1933	0.21	0.25	0.2	0.03	0.1896	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.108342	NA	NA	0.193953	0.052655	NA	0.13	NA	3.396747
1312	1	47689842	47689842	C	G	intronic	TAL1	NA	NA	NA	intronic	ENSG00000162367	NA	NA	NA	NA	NA	1p33	NA	NA	NA	NA	rs34087210	0.34	0.34	0.317	0.326078	0.6034	0.0139	0.4164	0.23	0.4284	0.61	0.0035	0.49	0.23	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.420386	NA	NA	NA	NA	NA	0.413	NA	3.3966
1312	7	4215298	4215298	T	C	intronic	SDK1	NA	NA	NA	intronic	ENSG00000146555	NA	NA	NA	NA	NA	7p22.2	NA	NA	NA	NA	rs4720185	0.59	0.59	0.539	0.549321	0.6034	0.6895	0.6715	0.32	0.5726	0.62	0.72	0.67	0.33	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.289461	NA	NA	NA	NA	NA	0.601	NA	3.3966
1312	14	90752908	90752908	G	T	intronic	NRDE2	NA	NA	NA	intronic	ENSG00000119720	NA	NA	NA	NA	NA	14q32.11	NA	NA	NA	NA	rs7160304	0.55	0.55	0.536	0.558307	0.6034	0.4891	0.6556	0.4992	0.5941	0.59	0.49	0.62	0.5	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.285894	NA	NA	NA	NA	NA	0.522	NA	3.3966
1312	14	24529820	24529820	C	G	intronic	LRRC16B	NA	NA	NA	intronic	ENSG00000186648	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs1951636	0.21	0.21	0.204	0.209465	0.1948	0.3562	0.1268	0.0915	0.2914	0.19	0.38	0.13	0.1	0.2011	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.587725	3.587725	NA	0.207674	0.091693	NA	0.29	NA	3.396426
1312	1	33960062	33960062	A	G	exonic	ZSCAN20	NA	synonymous SNV	ZSCAN20:NM_145238:exon8:c.A2118G:p.A706A	exonic	ENSG00000121903	NA	synonymous SNV	ENSG00000121903:ENST00000361328:exon8:c.A2118G:p.A706A	NA	NA	1p35.1	NA	NA	NA	NA	rs9943259	0.75	0.75	0.775	0.752596	0.7376	0.7381	0.6239	0.8495	0.7434	0.74	0.75	0.65	0.83	0.7443	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.773345	NA	NA	0.788353	0.840241	NA	0.855	NA	3.3964136
1312	19	35761519	35761519	A	G	intronic	USF2	NA	NA	NA	intronic	ENSG00000105698	NA	NA	NA	NA	NA	19q13.12	NA	NA	NA	NA	rs28365133	0.12	0.12	0.109	0.118011	0.2187	0.0258	0.1167	0.0605	0.1881	0.21	0.01	0.15	0.07	0.1774	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.277258	NA	NA	0.207558	0.093282	NA	0.072	NA	3.396342
1312	16	15872609	15872609	A	G	intronic	MYH11	NA	NA	NA	intronic	ENSG00000133392	NA	NA	NA	NA	NA	16p13.11	NA	NA	NA	NA	rs2075514	0.22	0.22	0.201	0.197883	0.2008	0.3234	0.1369	0.1657	0.1524	0.21	0.32	0.15	0.17	0.196	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.535284	NA	NA	0.207093	0.174784	NA	0.13	NA	3.396107
1312	1	181754803	181754803	C	T	intronic	CACNA1E	NA	NA	NA	intronic	ENSG00000198216	NA	NA	NA	NA	NA	1q25.3	NA	NA	NA	NA	rs473200	0.22	0.22	0.209	0.247005	0.2058	0.2748	0.1873	0.2534	0.2945	0.22	0.23	0.2	0.22	0.2117	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.944302	NA	NA	0.186449	0.222341	NA	0.188	NA	3.396051
1312	3	10219508	10219508	T	C	intronic	IRAK2	NA	NA	NA	intronic	ENSG00000134070	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs2306696	0.17	0.17	0.133	0.177117	0.2117	0.1022	0.3501	0.0832	0.2229	0.21	0.1	0.32	0.1	0.1972	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.053922	NA	NA	0.195116	0.09192	NA	0.167	NA	3.395984
1312	2	88289368	88289368	G	A	intergenic	RGPD1,KRCC1	dist=4059;dist=37356	NA	NA	intergenic	ENSG00000185304,ENSG00000238979	dist=4059;dist=21253	NA	NA	Score=537;Name=lod=203	NA	2p11.2	NA	NA	NA	NA	rs10209326	0.92	0.92	0.901	0.915136	0.9374	0.994	0.938	0.7844	0.9714	0.95	1	0.95	0.77	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.145658	NA	NA	NA	NA	NA	0.746	NA	3.3959334
1312	2	175622907	175622907	T	C	intronic	CHRNA1	NA	NA	NA	ncRNA_intronic	ENSG00000236449	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	rs2600687	0.91	0.91	0.9	0.902157	0.9374	1	0.9539	0.7247	0.9683	0.93	1	0.95	0.73	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.531269	NA	NA	NA	NA	NA	0.884	NA	3.3959333
1312	1	19464773	19464773	C	T	intronic	UBR4	NA	NA	NA	intronic	ENSG00000127481	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs2274001	0.71	0.71	0.688	0.694888	0.6044	0.8105	0.7248	0.7587	0.5613	0.6	0.82	0.7	0.76	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.393962	NA	NA	NA	NA	NA	0.681	NA	3.3956
1312	1	19488839	19488839	C	A	intronic	UBR4	NA	NA	NA	intronic	ENSG00000127481	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs1999967	0.72	0.72	0.693	0.71226	0.6044	0.8115	0.7305	0.8207	0.5613	0.6	0.82	0.71	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.270976	NA	NA	NA	NA	NA	0.71	NA	3.3956
1312	1	225611845	225611845	C	T	intronic	LBR	NA	NA	NA	intronic	ENSG00000143815	NA	NA	NA	NA	NA	1q42.12	NA	NA	NA	NA	rs1340867	0.67	0.67	0.642	0.601837	0.6044	0.751	0.7205	0.5991	0.365	0.59	0.81	0.69	0.62	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.123202	NA	NA	NA	NA	NA	0.601	NA	3.3956
1312	3	190028947	190028947	T	C	intronic	CLDN1	NA	NA	NA	intronic	ENSG00000163347	NA	NA	NA	NA	NA	3q28	NA	NA	NA	NA	rs3774025	0.71	0.71	0.741	0.697484	0.6044	0.8036	0.6066	0.848	0.545	0.6	0.81	0.6	0.83	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.514072	NA	NA	NA	NA	NA	0.688	NA	3.3956
1312	4	5747131	5747131	C	A	intronic	EVC	NA	NA	NA	intronic	ENSG00000072840	NA	NA	NA	NA	NA	4p16.2	NA	NA	NA	NA	rs13145958	0.49	0.49	0.458	0.491613	0.6044	0.3502	0.4769	0.4728	0.5573	0.61	0.3	0.49	0.51	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.34158	NA	NA	NA	NA	NA	0.507	NA	3.3956
1312	4	9706478	9706478	C	A	intergenic	MIR548I2,DRD5	dist=148541;dist=76780	NA	NA	ncRNA_intronic	ENSG00000251087	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs11943931	0.46	0.46	0.427	0.421925	0.6044	0.377	0.4885	0.3109	0.3834	0.6	0.39	0.55	0.25	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.612366	NA	NA	NA	NA	NA	0.326	NA	3.3956
1312	19	281360	281360	C	T	UTR3	PPAP2C	NM_003712:c.*28G>A,NM_177526:c.*28G>A,NM_177543:c.*28G>A	NA	NA	UTR3	ENSG00000141934	ENST00000269812:c.*28G>A,ENST00000434325:c.*28G>A	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs7815	0.18	0.18	0.167	0.185903	0.3111	0.0923	0.1859	0.0658	0.316	0.29	0.09	0.23	0.1	0.2882	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.071325	NA	NA	0.338488	0.106446	NA	0.152	NA	3.3955454
1312	5	121187497	121187497	A	G	upstream	FTMT	NA	NA	NA	upstream	ENSG00000181867	NA	NA	NA	NA	NA	5q23.1	NA	NA	NA	NA	rs7720502	0.39	0.39	0.398	0.4377	0.2714	0.1825	0.2839	0.9175	0.3323	0.27	0.21	0.28	0.89	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.140708	NA	NA	NA	NA	NA	0.391	NA	3.3952666
1312	10	27423744	27423744	T	C	intronic	YME1L1	NA	NA	NA	intronic	ENSG00000136758	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs2275752	0.28	0.28	0.276	0.280351	0.2127	0.4018	0.1758	0.3048	0.2658	0.22	0.4	0.18	0.29	0.2162	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.002343	NA	NA	0.176047	0.303134	NA	0.246	NA	3.395053
1313	1	150437215	150437215	A	G	intronic	RPRD2	NA	NA	NA	intronic	ENSG00000163125	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs66513313	0.18	0.18	0.205	0.163538	0.2068	0.002	0.1182	0.3623	0.0491	0.23	0.0035	0.12	0.36	0.1916	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.149004	2.149004	NA	0.206609	0.311227	NA	0.232	NA	3.394991
1313	9	134518575	134518575	T	C	intronic	RAPGEF1	NA	NA	NA	intronic	ENSG00000107263	NA	NA	NA	NA	NA	9q34.13	NA	NA	NA	NA	rs7854489	0.25	0.25	0.225	0.252796	0.3231	0.2569	0.2262	0.143	0.3436	0.32	0.26	0.24	0.14	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.553992	NA	NA	0.281917	0.125756	NA	0.275	NA	3.394983
1313	1	19441212	19441212	A	G	intronic	UBR4	NA	NA	NA	intronic	ENSG00000127481	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs2274003	0.68	0.68	0.658	0.664137	0.6054	0.8006	0.7133	0.6611	0.5532	0.6	0.81	0.69	0.66	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.736396	NA	NA	NA	NA	NA	0.696	NA	3.3946
1313	1	155981489	155981489	C	G	intronic	SSR2	NA	NA	NA	intronic	ENSG00000163479	NA	NA	NA	NA	NA	1q22	NA	NA	NA	NA	rs1475766	0.4	0.4	0.39	0.416933	0.6054	0.1498	0.5375	0.3094	0.5583	0.6	0.13	0.51	0.33	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.819921	1.819921	NA	NA	NA	NA	0.478	NA	3.3946
1313	1	158425115	158425115	C	T	intergenic	OR10K2,OR10K1	dist=34459;dist=10237	NA	NA	downstream	ENSG00000236257	NA	NA	NA	NA	NA	1q23.1	NA	NA	NA	NA	rs112207689	0.05	0.05	0.053	0.0385383	0.1054	NA	0.062	0.0045	0.0389	0.11	NA	0.07	0.01	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.561219	NA	NA	NA	NA	NA	0.022	NA	3.3946
1313	9	27608667	27608667	T	C	intergenic	C9orf72,LINGO2	dist=34803;dist=339417	NA	NA	ncRNA_exonic	ENSG00000215441	NA	NA	NA	NA	NA	9p21.2	NA	NA	NA	NA	rs4119808	0.48	0.48	0.438	0.470847	0.6054	0.3353	0.5807	0.3623	0.5409	0.59	0.33	0.55	0.41	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.402298	NA	NA	NA	NA	NA	0.435	NA	3.3946
1313	9	101258881	101258881	T	C	intronic	GABBR2	NA	NA	NA	intronic	ENSG00000136928	NA	NA	NA	NA	NA	9q22.33	NA	NA	NA	NA	rs1000440	0.49	0.49	0.509	0.491014	0.6054	0.1954	0.4553	0.7005	0.4202	0.61	0.18	0.48	0.69	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.766395	NA	NA	NA	NA	NA	0.717	NA	3.3946
1313	11	69070800	69070800	C	T	intergenic	MYEOV,CCND1	dist=6046;dist=385073	NA	NA	downstream	ENSG00000213275	NA	NA	NA	NA	NA	11q13.3	NA	NA	NA	NA	rs4930676	0.14	0.14	0.128	0.171326	0.1054	0.245	0.0821	0.1324	0.2791	0.1	0.21	0.09	0.14	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.622035	NA	NA	NA	NA	NA	0.152	NA	3.3946
1313	19	10071634	10071634	T	C	intronic	COL5A3	NA	NA	NA	intronic	ENSG00000080573	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs918542	0.67	0.67	0.681	0.678315	0.6054	0.5387	0.6225	0.9607	0.5552	0.62	0.53	0.62	0.96	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.390399	NA	NA	NA	NA	NA	0.717	NA	3.3946
1313	20	10438780	10438780	A	G	intronic	SLX4IP	NA	NA	NA	intronic	ENSG00000149346	NA	NA	NA	NA	NA	20p12.2	NA	NA	NA	NA	rs6104617	0.39	0.39	0.339	0.352037	0.6054	0.1518	0.464	0.2519	0.3538	0.6	0.16	0.48	0.26	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.849828	NA	NA	NA	NA	NA	0.29	NA	3.3946
1313	11	74877004	74877004	G	A	intronic	SLCO2B1	NA	NA	NA	intronic	ENSG00000137491	NA	NA	NA	NA	NA	11q13.4	NA	NA	NA	NA	rs3740839	0.27	0.27	0.239	0.299521	0.175	0.3304	0.4467	0.2769	0.3221	0.16	0.35	0.4	0.26	0.2511	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.742778	NA	NA	0.179944	0.253864	NA	0.203	NA	3.393956
1313	1	19413420	19413420	T	G	intronic	UBR4	NA	NA	NA	intronic	ENSG00000127481	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs2274008	0.72	0.72	0.705	0.718251	0.6064	0.8105	0.7334	0.8366	0.5675	0.6	0.82	0.7	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.053761	NA	NA	NA	NA	NA	0.732	NA	3.3936
1313	1	19448608	19448608	C	G	intronic	UBR4	NA	NA	NA	intronic	ENSG00000127481	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs7535738	0.68	0.68	0.658	0.664337	0.6064	0.8006	0.7133	0.6611	0.5532	0.6	0.81	0.69	0.66	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.233529	NA	NA	NA	NA	NA	0.696	NA	3.3936
1313	8	27467821	27467821	C	G	intronic	CLU	NA	NA	NA	intronic	ENSG00000120885	NA	NA	NA	NA	NA	8p21.1	NA	NA	NA	NA	rs2070926	0.74	0.74	0.751	0.764776	0.6064	0.7907	0.6801	0.944	0.7188	0.6	0.81	0.67	0.95	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.094607	NA	NA	NA	NA	NA	0.688	NA	3.3936
1313	9	98175763	98175763	G	A	intergenic	FANCC,PTCH1	dist=95772;dist=29501	NA	NA	upstream	ENSG00000213761	NA	NA	NA	NA	NA	9q22.32	NA	NA	NA	NA	rs357562	0.09	0.09	0.09	0.0652955	0.1064	0.119	0.0735	0.0091	0.0378	0.12	0.13	0.07	0.0041	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.234404	NA	NA	NA	NA	NA	0.036	NA	3.3936
1313	9	135601367	135601367	G	C	intronic	AK8	NA	NA	NA	intronic	ENSG00000165695	NA	NA	NA	NA	NA	9q34.13	NA	NA	NA	NA	rs396801	0.63	0.63	0.604	0.61262	0.6064	0.504	0.7378	0.6732	0.5603	0.61	0.55	0.7	0.7	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.715985	NA	NA	NA	NA	NA	0.594	NA	3.3936
1313	5	44305309	44305309	C	G	intronic	FGF10	NA	NA	NA	intronic	ENSG00000070193	NA	NA	NA	NA	NA	5p12	NA	NA	NA	NA	rs2290070	0.19	0.19	0.153	0.183906	0.1938	0.1796	0.366	0.0651	0.2096	0.2	0.18	0.33	0.08	0.2161	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.416793	NA	NA	0.196744	0.095325	NA	0.174	NA	3.393356
1313	11	78277277	78277277	A	G	exonic	NARS2	NA	synonymous SNV	NARS2:NM_024678:exon4:c.T414C:p.Y138Y	exonic	ENSG00000137513	NA	synonymous SNV	ENSG00000137513:ENST00000281038:exon4:c.T414C:p.Y138Y,ENSG00000137513:ENST00000529880:exon4:c.T414C:p.Y138Y	NA	NA	11q14.1	NA	NA	NA	NA	rs10751296	0.65	0.65	0.647	0.650559	0.7664	0.5794	0.6023	0.5991	0.7086	0.77	0.54	0.66	0.59	0.7162	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.795957	NA	NA	0.790725	0.623864	NA	0.732	NA	3.3933416
1313	14	106877947	106877947	A	G	intergenic	LINC00226,LINC00221	dist=132981;dist=60508	NA	NA	intronic	ENSG00000211959	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs73367262	NA	NA	0.181	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2734	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.090931	NA	NA	NA	NA	NA	0.007	NA	3.3932667
1313	20	3726687	3726687	G	A	intronic	HSPA12B	NA	NA	NA	intronic	ENSG00000132622	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs41279388	0.15	0.15	0.139	0.148762	0.2137	0.2391	0.085	0.0061	0.227	0.21	0.23	0.08	0.01	0.1892	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.463614	NA	NA	0.20407	0.039719	NA	0.101	NA	3.39303
1313	12	100676960	100676960	C	A	intronic	SCYL2	NA	NA	NA	intronic	ENSG00000136021	NA	NA	NA	NA	NA	12q23.1	NA	NA	NA	NA	rs7965910	0.19	0.19	0.207	0.185104	0.2227	0.0407	0.1527	0.3427	0.1053	0.21	0.05	0.15	0.35	0.1784	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.346506	NA	NA	0.206163	0.31094	NA	0.21	NA	3.392737
1313	1	12067044	12067044	T	G	intronic	MFN2	NA	NA	NA	intronic	ENSG00000116688	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs7550536	0.53	0.53	0.501	0.526757	0.6074	0.5456	0.4986	0.41	0.6022	0.62	0.51	0.51	0.44	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.534753	NA	NA	NA	NA	NA	0.457	NA	3.3926
1313	7	4259989	4259989	G	C	intronic	SDK1	NA	NA	NA	intronic	ENSG00000146555	NA	NA	NA	NA	NA	7p22.2	NA	NA	NA	NA	rs13224208	0.58	0.58	0.621	0.604233	0.6074	0.369	0.4006	0.8729	0.6247	0.61	0.37	0.42	0.87	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.048779	NA	NA	NA	NA	NA	0.594	NA	3.3926
1313	12	8914709	8914709	A	G	intronic	RIMKLB	NA	NA	NA	intronic	ENSG00000166532	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs2969090	0.48	0.48	0.436	0.490415	0.6074	0.4663	0.4986	0.3101	0.6329	0.59	0.45	0.53	0.31	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.34	NA	NA	NA	NA	NA	0.493	NA	3.3926
1313	19	47549791	47549791	A	G	intronic	TMEM160	NA	NA	NA	intronic	ENSG00000130748	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs1862499	0.53	0.53	0.492	0.470847	0.6074	0.6974	0.5375	0.2224	0.3855	0.61	0.68	0.51	0.24	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.699177	NA	NA	NA	NA	NA	0.543	NA	3.3926
1313	5	54423075	54423075	C	T	intronic	CDC20B	NA	NA	NA	intronic	ENSG00000164287	NA	NA	NA	NA	NA	5q11.2	NA	NA	NA	NA	rs72766134	0.16	0.16	0.118	0.169728	0.2147	0.1865	0.147	0.0401	0.2975	0.22	0.16	0.16	0.05	0.2022	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.127204	NA	NA	0.190814	0.061507	ID=COSM149838;OCCURENCE=1(stomach)	0.087	NA	3.392286
1313	12	39756878	39756878	G	A	intronic	KIF21A	NA	NA	NA	intronic	ENSG00000139116	NA	NA	NA	NA	NA	12q12	NA	NA	NA	NA	rs3736466	0.25	0.25	0.256	0.302316	0.1958	0.379	0.1888	0.2859	0.4356	0.18	0.35	0.2	0.27	0.2337	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.014805	NA	NA	0.178256	0.258738	NA	0.188	NA	3.392244
1313	15	74032234	74032234	C	T	UTR3	C15orf59	NM_001039614:c.*24G>A	NA	NA	UTR3	ENSG00000205363	ENST00000569673:c.*24G>A,ENST00000379822:c.*24G>A	NA	NA	NA	NA	15q24.1	NA	NA	NA	NA	rs11857595	0.21	0.21	0.19	0.188898	0.3191	0.0675	0.2767	0.1657	0.1493	0.33	0.06	0.3	0.15	0.29	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.601707	NA	NA	0.332149	0.175097	NA	0.109	NA	3.3920844
1313	5	7859523	7859523	A	G	UTR3	FASTKD3	NM_024091:c.*25T>C	NA	NA	UTR3	ENSG00000124279	ENST00000264669:c.*25T>C,ENST00000511261:c.*1277T>C,ENST00000507036:c.*308T>C	NA	NA	NA	NA	5p15.31	NA	NA	NA	NA	rs1046012	0.21	0.21	0.197	0.189696	0.3181	0.0506	0.1888	0.2345	0.1411	0.33	0.03	0.2	0.24	0.2886	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.712019	NA	NA	0.334729	0.236483	NA	0.174	NA	3.3919044
1313	16	78142308	78142308	G	T	intronic	WWOX	NA	NA	NA	intronic	ENSG00000186153	NA	NA	NA	NA	NA	16q23.1	NA	NA	NA	NA	rs67493355	NA	NA	NA	0.292532	0.3221	0.2063	0.2565	0.3941	0.2393	NA	NA	NA	NA	0.286	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.574667	NA	NA	NA	NA	NA	0.087	NA	3.3919
1313	19	40224894	40224894	C	T	intronic	CLC	NA	NA	NA	intronic	ENSG00000105205	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs2074927	0.16	0.16	0.134	0.185304	0.2097	0.1667	0.2262	0.056	0.3252	0.21	0.17	0.17	0.07	0.2079	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.868596	NA	NA	0.190581	0.074671	NA	0.116	NA	3.391819
1313	X	301992	301992	G	A	intronic	PPP2R3B	NA	NA	NA	intronic	ENSG00000167393	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs6645142	0.33	0.33	0.34817	NA	NA	NA	NA	NA	NA	0.32	0.39	0.27	0.35	0.3028	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011554	NA	NA	0.305387	0.334193	NA	0.022	NA	3.391813
1313	21	18933828	18933828	A	G	intronic	CXADR	NA	NA	NA	intronic	ENSG00000154639	NA	NA	NA	NA	NA	21q21.1	NA	NA	NA	NA	rs2824359	0.18	0.18	0.167	0.175519	0.2068	0.2183	0.196	0.0749	0.2209	0.21	0.22	0.2	0.06	0.1995	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.501693	NA	NA	0.201907	0.101726	ID=COSN166621;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.138	NA	3.391793
1313	9	35679061	35679061	C	T	intronic	CA9	NA	NA	NA	intronic	ENSG00000107159	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs2857802	0.56	0.56	0.585	0.547125	0.6083	0.3909	0.5605	0.6407	0.5092	0.63	0.4	0.6	0.62	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.764553	NA	NA	NA	NA	NA	0.638	NA	3.3917
1313	10	30978164	30978164	A	G	intergenic	LYZL2,ZNF438	dist=59517;dist=155401	NA	NA	ncRNA_intronic	ENSG00000234814	NA	NA	NA	NA	NA	10p11.23	NA	NA	NA	NA	rs28363791	0.55	0.55	0.501	0.555312	0.6083	0.4325	0.5908	0.5703	0.5818	0.62	0.42	0.61	0.54	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.020002	NA	NA	NA	NA	NA	0.37	NA	3.3917
1313	15	34544351	34544351	C	A	intronic	SLC12A6	NA	NA	NA	intronic	ENSG00000140199	NA	NA	NA	NA	NA	15q14	NA	NA	NA	NA	rs2290941	0.2	0.2	0.18	0.206869	0.2068	0.2817	0.2017	0.1256	0.2434	0.22	0.27	0.2	0.11	0.2313	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.011218	NA	NA	0.170391	0.124943	NA	0.094	NA	3.391509
1313	16	89613037	89613037	G	A	intronic	SPG7	NA	NA	NA	intronic	ENSG00000197912	NA	NA	NA	NA	NA	16q24.3	NA	NA	NA	NA	rs462464	0.19	0.19	0.179	0.19389	0.1958	0.1508	0.1499	0.2171	0.2362	0.2	0.16	0.16	0.22	0.198	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.849605	NA	NA	0.214767	0.208144	NA	0.123	NA	3.391433
1313	7	142162278	142162278	C	T	intergenic	LOC730441,MTRNR2L6	dist=190210;dist=211853	NA	NA	intronic	ENSG00000211724	NA	NA	NA	NA	NA	7q34	NA	Name=GATA-1	NA	NA	rs361443	0.71	0.71	0.657	0.683506	0.6968	0.7837	0.5692	0.7231	0.5941	0.7	0.81	0.59	0.69	0.5788	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.382532	NA	NA	NA	NA	NA	0.63	NA	3.3910667
1313	12	45173571	45173571	C	A	intronic	NELL2	NA	NA	NA	intronic	ENSG00000184613	NA	NA	NA	NA	NA	12q12	NA	NA	NA	NA	rs1123078	0.24	0.24	0.231	0.251797	0.171	0.2599	0.2709	0.2693	0.2894	0.18	0.25	0.27	0.3	0.2431	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.65934	NA	NA	0.195	0.268724	NA	0.333	NA	3.3909
1313	19	57752326	57752326	C	G	intronic	ZNF805	NA	NA	NA	intronic	ENSG00000204524	NA	NA	NA	NA	NA	19q13.43	NA	Name=CHD2_(N-1250)	NA	NA	rs8111661	0.41	0.41	0.381	0.40595	0.5795	0.1677	0.4568	0.3812	0.4703	0.57	0.19	0.49	0.36	0.5077	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.761153	NA	NA	0.521999	0.361272	NA	0.341	NA	3.390801
1313	1	166958937	166958937	G	T	intronic	MAEL	NA	NA	NA	intronic	ENSG00000143194	NA	NA	NA	NA	NA	1q24.1	NA	NA	NA	NA	rs41269702	0.23	0.23	0.262	0.233626	0.1889	0.247	0.1268	0.3548	0.1779	0.18	0.27	0.12	0.35	0.2215	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.710483	NA	NA	0.198837	0.34348	NA	0.29	NA	3.390763
1313	4	9735217	9735217	C	T	intergenic	MIR548I2,DRD5	dist=177280;dist=48041	NA	NA	ncRNA_intronic	ENSG00000249563	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs10939482	0.46	0.46	0.448	0.433906	0.6093	0.3224	0.5375	0.3449	0.4151	0.6	0.34	0.56	0.3	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.28953	NA	NA	NA	NA	NA	0.275	NA	3.3907
1313	6	158504365	158504365	G	A	intronic	SYNJ2	NA	NA	NA	intronic	ENSG00000078269	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs1744175	0.63	0.63	0.674	0.648163	0.6093	0.5794	0.4164	0.8699	0.6237	0.63	0.55	0.47	0.86	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.225062	NA	NA	NA	NA	NA	0.696	NA	3.3907
1313	10	98379928	98379928	T	C	intronic	PIK3AP1	NA	NA	NA	intronic	ENSG00000155629	NA	NA	NA	NA	NA	10q24.1	NA	NA	NA	NA	rs3748235	0.62	0.62	0.609	0.605032	0.6093	0.8294	0.5216	0.4039	0.7004	0.62	0.86	0.56	0.4	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.298472	NA	NA	NA	NA	NA	0.601	NA	3.3907
1313	11	74842530	74842530	T	C	intergenic	OR2AT4,SLCO2B1	dist=41772;dist=19502	NA	NA	ncRNA_exonic	ENSG00000254475	NA	NA	NA	NA	NA	11q13.4	NA	NA	NA	NA	rs2712793	0.37	0.37	0.343	0.357827	0.6093	0.2669	0.4424	0.0696	0.5225	0.61	0.22	0.45	0.09	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.94353	NA	NA	NA	NA	NA	0.42	NA	3.3907
1313	21	47546244	47546244	T	C	intronic	COL6A2	NA	NA	NA	intronic	ENSG00000142173	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs13050660	0.57	0.57	0.547	0.551917	0.6093	0.4613	0.7017	0.5537	0.4775	0.62	0.44	0.67	0.58	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.090459	NA	NA	NA	NA	NA	0.355	NA	3.3907
1313	1	43907092	43907092	G	A	intronic	SZT2	NA	NA	NA	intronic	ENSG00000198198	NA	NA	NA	NA	NA	1p34.2	NA	NA	NA	NA	rs12407785	0.2	0.2	0.168	0.209665	0.1889	0.3859	0.2118	0.0166	0.3088	0.19	0.36	0.24	0.02	0.2204	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.434785	NA	NA	0.200233	0.045393	NA	0.087	NA	3.390467
1313	7	142162306	142162306	A	G	intergenic	LOC730441,MTRNR2L6	dist=190238;dist=211825	NA	NA	intronic	ENSG00000211724	NA	NA	NA	NA	NA	7q34	NA	Name=GATA-1	NA	NA	rs361442	0.7	0.7	0.629	0.672125	0.6978	0.7728	0.572	0.711	0.5603	0.7	0.78	0.59	0.69	0.5785	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.214773	NA	NA	NA	NA	NA	0.63	NA	3.3903667
1313	8	101203737	101203737	T	C	intronic	SPAG1	NA	NA	NA	intronic	ENSG00000104450	NA	NA	NA	NA	NA	8q22.2	NA	NA	NA	NA	rs3802149	0.15	0.15	0.12	0.150559	0.2117	0.0734	0.2392	0.0537	0.2352	0.21	0.07	0.25	0.07	0.1979	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.247762	NA	NA	0.200116	0.075806	NA	0.13	NA	3.390284
1313	2	29226498	29226498	G	A	exonic	FAM179A	NA	synonymous SNV	FAM179A:NM_199280:exon6:c.G780A:p.P260P	exonic	ENSG00000189350	NA	synonymous SNV	ENSG00000189350:ENST00000379558:exon6:c.G780A:p.P260P,ENSG00000189350:ENST00000403861:exon6:c.G780A:p.P260P	NA	NA	2p23.2	NA	NA	NA	NA	rs12613325	0.62	0.62	0.597	0.593251	0.7584	0.6677	0.7089	0.3056	0.6534	0.74	0.65	0.71	0.32	0.7232	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.128505	NA	NA	0.795098	0.382844	NA	0.594	NA	3.3899686
1313	12	53004654	53004654	C	G	intronic	KRT73	NA	NA	NA	ncRNA_exonic	ENSG00000257495	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs595624	0.24	0.24	0.201	0.257788	0.3181	0.1954	0.1902	0.2005	0.3855	0.34	0.2	0.2	0.18	0.3076	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.837333	1.837333	NA	0.317907	0.220154	NA	0.217	NA	3.3897263
1313	2	50280338	50280338	G	A	intronic	NRXN1	NA	NA	NA	intronic	ENSG00000179915	NA	NA	NA	NA	NA	2p16.3	NA	NA	NA	NA	rs1363049	0.6	0.6	0.584	0.58726	0.6103	0.6419	0.6427	0.5189	0.5603	0.61	0.64	0.65	0.5	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.292624	NA	NA	NA	NA	NA	0.616	NA	3.3897
1313	4	3443931	3443931	A	G	intronic	HGFAC	NA	NA	NA	intronic	ENSG00000109758	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs13108218	0.55	0.55	0.515	0.551518	0.6103	0.4881	0.5749	0.4962	0.6145	0.61	0.53	0.57	0.45	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.229707	NA	NA	NA	NA	NA	0.486	NA	3.3897
1313	5	145377578	145377578	C	T	intronic	SH3RF2	NA	NA	NA	intronic	ENSG00000156463	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs17426578	0.61	0.61	0.589	0.613219	0.6103	0.7212	0.5591	0.4372	0.7812	0.63	0.71	0.59	0.48	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.160838	NA	NA	NA	NA	NA	0.493	NA	3.3897
1313	6	32610282	32610282	T	G	intronic	HLA-DQA1	NA	NA	NA	intronic	ENSG00000196735	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs9272778	NA	NA	NA	0.631989	0.6103	0.7212	0.7205	0.5272	0.6411	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.907742	NA	NA	NA	NA	NA	NA	NA	3.3897
1313	9	93505417	93505417	T	C	intergenic	DIRAS2,SYK	dist=100309;dist=58595	NA	NA	ncRNA_exonic	ENSG00000236316	NA	NA	NA	NA	NA	9q22.2	NA	NA	NA	NA	rs1148850	0.61	0.61	0.558	0.647364	0.6103	0.5794	0.5173	0.8245	0.6084	0.59	0.54	0.53	0.8	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.017959	NA	NA	NA	NA	NA	0.246	NA	3.3897
1313	9	132845986	132845986	T	C	intronic	GPR107	NA	NA	NA	intronic	ENSG00000148358	NA	NA	NA	NA	NA	9q34.11	NA	NA	NA	NA	rs10819597	0.63	0.63	0.595	0.639976	0.6103	0.8006	0.6196	0.5295	0.6687	0.62	0.78	0.65	0.48	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.512513	NA	NA	NA	NA	NA	0.609	NA	3.3897
1313	10	134664875	134664875	A	G	intronic	TTC40	NA	NA	NA	intronic	ENSG00000171811	NA	NA	NA	NA	NA	10q26.3	NA	NA	NA	NA	rs7913626	0.62	0.62	0.622	0.667732	0.6103	0.4157	0.7262	0.8737	0.6667	0.59	0.43	0.71	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.285793	NA	NA	NA	NA	NA	0.725	NA	3.3897
1313	20	258191	258191	C	G	intronic	C20orf96	NA	NA	NA	intronic	ENSG00000196476	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs6132242	0.69	0.69	0.72	0.675319	0.6103	0.6974	0.4986	0.8979	0.544	0.63	0.7	0.5	0.9	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.057799	NA	NA	NA	NA	NA	0.652	NA	3.3897
1313	17	42337976	42337976	G	A	intronic	SLC4A1	NA	NA	NA	intronic	ENSG00000004939,ENSG00000268413	NA	NA	NA	NA	NA	17q21.31	NA	NA	NA	NA	rs2074107	0.19	0.19	0.185	0.192692	0.2147	0.0833	0.1398	0.3313	0.1329	0.21	0.08	0.15	0.32	0.1928	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.308534	NA	NA	0.203488	0.316387	NA	0.21	NA	3.389012
1313	6	19613088	19613088	A	G	intergenic	MIR548A1,ID4	dist=1040977;dist=224513	NA	NA	ncRNA_exonic	ENSG00000214012	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs1936906	0.54	0.54	0.468	0.548323	0.6113	0.3571	0.5375	0.7156	0.4622	0.59	0.32	0.56	0.7	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.025858	NA	NA	NA	NA	NA	0.71	NA	3.3887
1313	19	7622226	7622226	G	A	intronic	PNPLA6	NA	NA	NA	intronic	ENSG00000032444	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs1645800	0.52	0.52	0.483	0.533347	0.6113	0.3482	0.6354	0.5113	0.6012	0.6	0.34	0.65	0.52	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.10764	NA	NA	NA	NA	NA	0.536	NA	3.3887
1313	11	78440736	78440736	G	C	intronic	TENM4	NA	NA	NA	intronic	ENSG00000149256	NA	NA	NA	NA	NA	11q14.1	NA	NA	NA	NA	rs512004	0.25	0.25	0.249	0.244409	0.1968	0.1538	0.2637	0.4206	0.135	0.18	0.14	0.28	0.47	0.2175	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.829001	NA	NA	0.197305	0.357679	NA	0.304	NA	3.388395
1313	3	13860957	13860957	A	G	intronic	WNT7A	NA	NA	NA	intronic	ENSG00000154764	NA	NA	NA	NA	NA	3p25.1	NA	NA	NA	NA	rs79020924	0.15	0.15	0.136	0.126597	0.2207	0.0754	0.2205	0.0378	0.136	0.23	0.09	0.23	0.03	0.1829	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.708342	NA	NA	0.208023	0.061734	NA	0.094	NA	3.388377
1313	10	3160917	3160917	T	C	intronic	PFKP	NA	NA	NA	intronic	ENSG00000067057	NA	NA	NA	NA	NA	10p15.2	NA	Name=Pol2	NA	NA	rs3829913	0.8	0.8	0.809	0.802316	0.8072	0.874	0.7997	0.7027	0.8599	0.81	0.88	0.79	0.71	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.150209	NA	NA	0.804525	0.748555	NA	0.638	NA	3.388275
1313	14	106866748	106866748	A	T	intergenic	LINC00226,LINC00221	dist=121782;dist=71707	NA	NA	intronic	ENSG00000211958	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs73379084	NA	NA	0.218	0.0351438	0.002	0.001	0.013	0.1233	0.001	NA	NA	NA	NA	0.1758	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.996239	NA	NA	0.10067	0.353594	NA	0.051	NA	3.3881967
1313	6	28474218	28474218	C	G	intronic	GPX6	NA	NA	NA	intronic	ENSG00000198704	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs974334	0.35	0.35	0.361	0.36881	0.174	0.4931	0.2911	0.4871	0.3364	0.17	0.5	0.29	0.51	0.266	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.18886	NA	NA	0.172276	0.440949	ID=COSN167724;OCCURENCE=1(large_intestine)	0.37	NA	3.387724
1313	10	134647453	134647453	C	T	intronic	TTC40	NA	NA	NA	intronic	ENSG00000171811	NA	NA	NA	NA	NA	10q26.3	NA	NA	NA	NA	rs3750583	0.62	0.62	0.599	0.657348	0.6123	0.4018	0.7219	0.8585	0.6493	0.59	0.41	0.71	0.83	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.580652	NA	NA	NA	NA	NA	0.681	NA	3.3877
1313	14	21202897	21202897	C	T	intergenic	RNASE4,EDDM3A	dist=34139;dist=11202	NA	NA	ncRNA_exonic	ENSG00000258963	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs4394987	0.66	0.66	0.67	0.661941	0.6123	0.8512	0.4769	0.6415	0.6769	0.61	0.85	0.48	0.65	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.781145	NA	NA	NA	NA	NA	0.659	NA	3.3877
1313	19	21205531	21205531	C	T	intronic	ZNF430	NA	NA	NA	intronic	ENSG00000118620	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs7252588	0.53	0.53	0.482	0.498602	0.6123	0.7202	0.7032	0.1036	0.5419	0.58	0.75	0.68	0.11	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.877841	NA	NA	NA	NA	NA	0.406	NA	3.3877
1313	19	43688854	43688854	G	C	intronic	PSG5	NA	NA	NA	intronic	ENSG00000204941	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs7248859	0.71	0.71	0.731	0.766773	0.6123	0.9851	0.5807	0.8396	0.7342	0.57	0.95	0.52	0.77	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.605896	NA	NA	NA	NA	NA	0.703	NA	3.3877
1313	11	123988331	123988331	G	A	intronic	VWA5A	NA	NA	NA	intronic	ENSG00000110002	NA	NA	NA	NA	NA	11q24.2	NA	NA	NA	NA	rs2276049	0.13	0.13	0.13	0.107029	0.2386	0.0933	0.1153	0.031	0.0828	0.23	0.1	0.12	0.03	0.1678	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.279317	NA	NA	0.205978	0.054748	NA	0.065	NA	3.387622
1313	1	97278804	97278804	G	A	intronic	PTBP2	NA	NA	NA	intronic	ENSG00000117569	NA	NA	NA	Score=701;Name=lod=939	NA	1p21.3	NA	NA	NA	NA	rs273886	0.61	0.61	0.582	0.63099	0.5358	0.6339	0.549	0.7345	0.6442	0.53	0.64	0.56	0.72	0.5499	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.473695	NA	NA	0.526885	0.715455	NA	0.493	NA	3.387415
1313	5	38352476	38352476	C	T	intronic	EGFLAM	NA	NA	NA	intronic	ENSG00000164318	NA	NA	NA	NA	NA	5p13.2	NA	NA	NA	NA	rs2589812	0.24	0.24	0.212	0.235823	0.2237	0.2292	0.1455	0.3177	0.2086	0.22	0.22	0.19	0.31	0.194	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.53767	NA	NA	0.195349	0.28847	NA	0.21	NA	3.386951
1313	22	30405151	30405151	T	C	intronic	MTMR3	NA	NA	NA	ncRNA_exonic	ENSG00000227117	NA	NA	NA	NA	NA	22q12.2	NA	NA	Name=9	NA	rs41157	0.67	0.67	0.645	0.753794	0.6143	0.5437	0.7853	0.9017	0.8916	0.61	0.52	0.76	0.87	0.7041	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.36038	NA	NA	0.62814	0.862914	NA	0.717	NA	3.3867933
1313	20	19560664	19560664	G	A	exonic	SLC24A3	NA	synonymous SNV	SLC24A3:NM_020689:exon4:c.G369A:p.A123A	exonic	ENSG00000185052	NA	synonymous SNV	ENSG00000185052:ENST00000328041:exon4:c.G369A:p.A123A	NA	NA	20p11.23	NA	NA	NA	NA	rs3790261	0.67	0.67	0.639	0.652756	0.7922	0.6567	0.7118	0.4508	0.7362	0.79	0.64	0.7	0.49	0.7292	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.218882	NA	NA	0.758488	0.522696	NA	0.725	NA	3.3867786
1313	12	52632573	52632573	A	G	intronic	KRT7	NA	NA	NA	intronic	ENSG00000135480	NA	NA	NA	NA	NA	12q13.13	NA	Name=Pol2	NA	NA	rs7300317	0.46	0.46	0.47	0.480831	0.5427	0.3145	0.4582	0.5734	0.4796	0.54	0.29	0.45	0.55	0.5136	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.312067	NA	NA	0.556977	0.581707	ID=COSN164252;OCCURENCE=1(breast)	0.507	NA	3.386723
1313	5	29882044	29882044	G	A	intergenic	LSP1P3,CDH6	dist=954624;dist=1311718	NA	NA	ncRNA_exonic	ENSG00000233787	NA	NA	NA	NA	NA	5p13.3	NA	NA	NA	NA	rs2115185	0.37	0.37	0.346	0.34385	0.6133	0.2302	0.3285	0.1974	0.3926	0.62	0.18	0.38	0.17	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.760975	NA	NA	NA	NA	NA	0.283	NA	3.3867
1313	10	49873845	49873845	C	T	intergenic	ARHGAP22,WDFY4	dist=13284;dist=19673	NA	NA	ncRNA_intronic	ENSG00000236800	NA	NA	NA	NA	NA	10q11.22	NA	NA	NA	NA	rs2377618	0.56	0.56	0.522	0.555911	0.6133	0.5933	0.634	0.4289	0.5746	0.61	0.57	0.62	0.43	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.780685	NA	NA	NA	NA	NA	0.543	NA	3.3867
1313	12	3321109	3321109	A	G	intronic	TSPAN9	NA	NA	NA	intronic	ENSG00000011105	NA	NA	NA	NA	NA	12p13.32	NA	NA	NA	NA	rs17779041	0.51	0.51	0.444	0.5002	0.6133	0.4524	0.6585	0.3472	0.5276	0.61	0.45	0.67	0.32	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.287325	NA	NA	NA	NA	NA	0.565	NA	3.3867
1313	9	2101545	2101545	T	A	intronic	SMARCA2	NA	NA	NA	intronic	ENSG00000080503	NA	NA	NA	NA	NA	9p24.3	NA	NA	NA	NA	rs10738570	0.31	0.31	0.321	0.31869	0.1769	0.3849	0.2248	0.531	0.1759	0.18	0.38	0.21	0.51	0.2461	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.363162	NA	NA	0.190432	0.446217	ID=COSN168459;OCCURENCE=1(oesophagus),1(large_intestine)	0.312	NA	3.386568
1313	13	42144853	42144853	A	G	intronic	VWA8	NA	NA	NA	intronic	ENSG00000102763	NA	NA	NA	NA	NA	13q14.11	NA	NA	NA	NA	rs9562321	0.34	0.34	0.347	0.375799	0.1799	0.379	0.3458	0.5787	0.3211	0.19	0.35	0.29	0.59	0.2574	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.436695	2.436695	NA	0.176256	0.499215	NA	0.362	NA	3.386444
1313	22	44112845	44112845	C	T	exonic	EFCAB6	NA	synonymous SNV	EFCAB6:NM_198856:exon7:c.G309A:p.S103S,EFCAB6:NM_022785:exon9:c.G765A:p.S255S	exonic	ENSG00000186976	NA	synonymous SNV	ENSG00000186976:ENST00000358439:exon7:c.G447A:p.S149S,ENSG00000186976:ENST00000396231:exon7:c.G309A:p.S103S,ENSG00000186976:ENST00000356087:exon8:c.G447A:p.S149S,ENSG00000186976:ENST00000262726:exon9:c.G765A:p.S255S	NA	NA	22q13.2	NA	NA	NA	NA	rs5764234	0.79	0.79	0.802	0.798522	0.7366	0.8581	0.7853	0.823	0.7771	0.74	0.86	0.77	0.81	0.7804	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.183389	NA	NA	0.763488	0.80881	NA	0.696	NA	3.3861786
1313	19	11409684	11409684	A	G	intronic	TSPAN16	NA	NA	NA	intronic	ENSG00000130167	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs422496	0.44	0.44	0.452	0.466054	0.3012	0.2877	0.3847	0.8654	0.3374	0.3	0.27	0.4	0.86	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.845386	NA	NA	0.312696	0.807803	NA	0.58	NA	3.386104
1313	3	367757	367757	G	C	intronic	CHL1	NA	NA	NA	intronic	ENSG00000134121	NA	NA	NA	NA	NA	3p26.3	NA	NA	NA	NA	rs162734	0.29	0.29	0.332	0.331669	0.1869	0.0179	0.1974	0.8449	0.2055	0.18	0.02	0.21	0.82	0.2267	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.524885	NA	NA	0.200349	0.75386	NA	0.326	NA	3.386051
1313	19	39338125	39338125	G	A	intronic	HNRNPL	NA	NA	NA	intronic	ENSG00000104824	NA	NA	NA	NA	NA	19q13.2	NA	Name=Pol2	NA	NA	rs862454	0.39	0.39	0.37	0.354233	0.5924	0.2421	0.4193	0.1604	0.4407	0.6	0.29	0.43	0.15	0.4696	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.215655	NA	NA	0.551977	0.210849	NA	0.42	NA	3.386023
1313	6	90323624	90323624	T	C	intronic	ANKRD6	NA	NA	NA	intronic	ENSG00000083099,ENSG00000135299	NA	NA	NA	NA	NA	6q15	NA	NA	NA	NA	rs1179906	0.18	0.18	0.173	0.234425	0.2058	0.0923	0.1499	0.3154	0.3609	0.19	0.07	0.14	0.31	0.2128	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.534212	1.534212	NA	0.195449	0.297364	NA	0.254	NA	3.385951
1313	5	145376757	145376757	C	T	intronic	SH3RF2	NA	NA	NA	intronic	ENSG00000156463	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs12652801	0.73	0.73	0.756	0.765974	0.6143	0.7212	0.6023	0.9902	0.7812	0.62	0.71	0.62	0.98	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.541301	NA	NA	NA	NA	NA	0.645	NA	3.3857
1313	7	6088339	6088339	T	C	intronic	EIF2AK1	NA	NA	NA	intronic	ENSG00000086232	NA	NA	NA	NA	NA	7p22.1	NA	NA	NA	NA	rs523254	0.61	0.61	0.637	0.588658	0.6143	0.4712	0.5908	0.7315	0.4888	0.61	0.5	0.6	0.72	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.018364	NA	NA	NA	NA	NA	0.594	NA	3.3857
1313	9	107531361	107531361	T	C	intronic	NIPSNAP3B	NA	NA	NA	intronic	ENSG00000165028	NA	NA	NA	NA	NA	9q31.1	NA	NA	NA	NA	rs2472478	0.65	0.65	0.658	0.633187	0.6143	0.5238	0.7435	0.7398	0.5429	0.61	0.56	0.72	0.77	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.682137	NA	NA	NA	NA	NA	0.63	NA	3.3857
1313	9	137808427	137808427	T	A	intronic	FCN1	NA	NA	NA	intronic	ENSG00000085265	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs2382714	0.48	0.48	0.49	0.463259	0.6143	0.4256	0.4107	0.3275	0.5675	0.63	0.45	0.39	0.35	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.108618	NA	NA	NA	NA	NA	0.493	NA	3.3857
1313	1	97189091	97189091	G	A	intronic	PTBP2	NA	NA	NA	intronic	ENSG00000117569	NA	NA	NA	NA	NA	1p21.3	NA	NA	Name=13	NA	rs3762411	0.61	0.61	0.579	0.631789	0.5368	0.6339	0.549	0.7352	0.6462	0.53	0.64	0.56	0.72	0.5503	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.117241	NA	NA	0.527326	0.719473	NA	0.493	NA	3.385574
1313	9	139407452	139407452	C	T	intronic	NOTCH1	NA	NA	NA	intronic	ENSG00000148400	NA	NA	NA	NA	NA	9q34.3	NA	NA	Name=31	NA	rs3812608	0.7	0.7	0.679	0.697284	0.5089	0.8671	0.6066	0.8744	0.5409	0.51	0.84	0.63	0.88	0.6279	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.614069	NA	NA	0.477652	0.809037	NA	0.261	NA	3.385548
1313	7	129929673	129929673	C	T	downstream	CPA2	NA	NA	NA	downstream	ENSG00000158516	NA	NA	NA	NA	NA	7q32.2	NA	NA	NA	NA	rs73146781	0.14	0.14	0.125	0.095647	0.2813	0.0079	0.1758	0.0098	0.0542	0.29	0.01	0.18	0.02	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.201696	NA	NA	NA	NA	NA	0.167	NA	3.3853666
1313	19	1986455	1986455	A	G	UTR3	BTBD2	NM_017797:c.*32T>C	NA	NA	UTR3	ENSG00000133243	ENST00000255608:c.*32T>C	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs7254820	0.4	0.4	0.396	0.424321	0.2982	0.5933	0.353	0.4516	0.3937	0.29	0.55	0.34	0.44	0.3513	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.377246	NA	NA	0.298488	0.412392	NA	0.464	NA	3.3853454
1313	4	39474868	39474868	G	A	intronic	LIAS	NA	NA	NA	intronic	ENSG00000121897	NA	NA	NA	NA	NA	4p14	NA	NA	NA	NA	rs749915	0.21	0.21	0.243	0.210264	0.2038	0.0724	0.183	0.416	0.1002	0.2	0.07	0.16	0.43	0.1983	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.357041	NA	NA	0.212558	0.381071	NA	0.283	NA	3.385342
1313	22	23101301	23101301	A	G	intergenic	GGTLC2,MIR650	dist=110933;dist=63969	NA	NA	intronic	ENSG00000211666	NA	NA	NA	NA	NA	22q11.22	NA	Name=Pol2	NA	NA	rs4822305	0.71	0.71	0.669	0.711462	0.6302	0.8621	0.7478	0.6619	0.681	0.62	0.87	0.71	0.65	0.6513	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.154998	NA	NA	NA	NA	NA	0.5	NA	3.3851667
1313	19	10104154	10104154	G	T	intronic	COL5A3	NA	NA	NA	intronic	ENSG00000080573	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs2277964	0.14	0.14	0.117	0.124002	0.2068	0.124	0.1499	0.0204	0.1605	0.21	0.15	0.17	0.03	0.1848	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.963259	NA	NA	0.223372	0.046754	NA	0.109	NA	3.385028
1314	12	103988311	103988311	T	C	intronic	STAB2	NA	NA	NA	intronic	ENSG00000136011	NA	NA	NA	NA	NA	12q23.3	NA	NA	NA	NA	rs703597	0.12	0.12	0.102	0.0978435	0.2266	0.005	0.1888	0.0136	0.1104	0.25	0.0035	0.2	0.02	0.1787	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.826188	NA	NA	0.21	0.041761	NA	0.08	NA	3.3847
1314	17	73124692	73124692	C	T	intronic	ARMC7	NA	NA	NA	intronic	ENSG00000125449	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs2291028	0.4	0.4	0.356	0.381789	0.6153	0.2798	0.4539	0.0696	0.6176	0.64	0.29	0.49	0.1	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.190135	NA	NA	NA	NA	NA	0.507	NA	3.3847
1314	18	21437721	21437721	A	G	intronic	LAMA3	NA	NA	NA	intronic	ENSG00000053747	NA	NA	NA	NA	NA	18q11.2	NA	NA	NA	NA	rs867448	0.39	0.39	0.371	0.344449	0.6153	0.1736	0.4135	0.202	0.3855	0.62	0.17	0.47	0.22	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.44572	NA	NA	NA	NA	NA	0.413	NA	3.3847
1314	19	50358183	50358183	C	A	intronic	PTOV1	NA	NA	NA	ncRNA_intronic	ENSG00000268047	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs2278836	0.25	0.25	0.274	0.263379	0.2942	0.2163	0.2133	0.2436	0.3425	0.3	0.2	0.24	0.23	0.3414	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.170191	NA	NA	0.313141	0.246466	NA	0.203	NA	3.3845923
1314	8	105263248	105263248	C	T	intronic	RIMS2	NA	NA	NA	intronic	ENSG00000176406	NA	NA	NA	NA	NA	8q22.3	NA	NA	NA	NA	rs1374519	0.11	0.11	0.087	0.0864617	0.2227	0.002	0.1254	0.0182	0.0982	0.22	NA	0.16	0.02	0.1657	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.179554	2.179554	NA	0.227052	0.052492	NA	0.072	NA	3.384548
1314	18	33828980	33828980	C	G	intronic	MOCOS	NA	NA	NA	intronic	ENSG00000075643	NA	NA	NA	NA	NA	18q12.2	NA	Name=SETDB1	NA	NA	rs567458	0.54	0.54	0.537	0.522165	0.5477	0.3125	0.5807	0.7557	0.3548	0.55	0.33	0.63	0.71	0.5272	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.19258	NA	NA	0.540814	0.715388	NA	0.536	NA	3.384286
1314	12	25343516	25343516	C	T	intronic	CASC1	NA	NA	NA	intronic	ENSG00000118307	NA	NA	NA	NA	NA	12p12.1	Score=894;Name=V$FOXJ2_01	NA	NA	NA	rs10842501	0.55	0.55	0.528	0.552316	0.5229	0.8135	0.5115	0.2958	0.6892	0.54	0.77	0.54	0.33	0.5611	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.062413	NA	NA	0.531867	0.340678	NA	0.514	NA	3.384133
1314	9	101908915	101908915	G	A	intronic	TGFBR1	NA	NA	NA	intronic	ENSG00000106799	NA	NA	NA	NA	NA	9q22.33	NA	NA	NA	NA	rs334354	0.29	0.29	0.288	0.269968	0.1938	0.4296	0.245	0.2436	0.2372	0.21	0.41	0.27	0.28	0.2194	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.178589	NA	NA	0.202791	0.246936	NA	0.261	NA	3.384009
1314	2	48166824	48166824	C	A	intergenic	FBXO11,FOXN2	dist=33892;dist=374971	NA	NA	downstream	ENSG00000226473	NA	NA	NA	NA	NA	2p16.3	NA	NA	NA	NA	rs76063782	0.05	0.05	0.044	0.0313498	0.1163	NA	0.0432	0.0038	0.0051	0.12	NA	0.06	0.0041	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.660847	NA	NA	NA	NA	NA	0.029	NA	3.3837
1314	2	98018281	98018281	G	A	intergenic	LOC100506123,LOC100506123	dist=60649;dist=63395	NA	NA	downstream	ENSG00000271569	NA	NA	NA	NA	NA	2q11.2	NA	NA	NA	NA	rs10207116	0.18	0.18	0.203	0.173522	0.1163	0.0734	0.1095	0.4206	0.047	0.11	0.08	0.12	0.45	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.879487	NA	NA	NA	NA	NA	0.188	NA	3.3837
1314	5	108925342	108925342	A	G	intergenic	PJA2,MAN2A1	dist=179667;dist=99814	NA	NA	downstream	ENSG00000214794	NA	NA	NA	NA	NA	5q21.3	NA	NA	NA	NA	rs10057191	0.09	0.09	0.082	0.0736821	0.1163	0.1042	0.1254	0.0136	0.0429	0.11	0.11	0.13	0.02	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.390118	NA	NA	NA	NA	NA	0.065	NA	3.3837
1314	15	25925195	25925195	T	C	intronic	ATP10A	NA	NA	NA	intronic	ENSG00000206190	NA	NA	NA	NA	NA	15q12	NA	NA	NA	NA	rs3736186	0.68	0.68	0.669	0.679712	0.6163	0.6349	0.7118	0.7867	0.6237	0.62	0.65	0.71	0.78	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.377497	NA	NA	NA	NA	NA	0.696	NA	3.3837
1314	7	107824889	107824889	C	G	exonic	NRCAM	NA	synonymous SNV	NRCAM:NM_001037132:exon18:c.G2205C:p.A735A,NRCAM:NM_005010:exon19:c.G2157C:p.A719A,NRCAM:NM_001193583:exon20:c.G2148C:p.A716A,NRCAM:NM_001193584:exon20:c.G2148C:p.A716A,NRCAM:NM_001193582:exon21:c.G2205C:p.A735A	exonic	ENSG00000091129	NA	synonymous SNV	ENSG00000091129:ENST00000425651:exon18:c.G2205C:p.A735A,ENSG00000091129:ENST00000351718:exon19:c.G2157C:p.A719A,ENSG00000091129:ENST00000379024:exon20:c.G2148C:p.A716A,ENSG00000091129:ENST00000379028:exon21:c.G2205C:p.A735A,ENSG00000091129:ENST00000413765:exon21:c.G2148C:p.A716A,ENSG00000091129:ENST00000379022:exon22:c.G2205C:p.A735A	NA	NA	7q31.1	NA	NA	NA	NA	rs401433	0.72	0.72	0.692	0.689097	0.7644	0.9554	0.7983	0.348	0.7209	0.77	0.94	0.77	0.35	0.7488	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.12484	NA	NA	0.769767	0.441443	NA	0.667	NA	3.3836996
1314	7	66660360	66660360	C	T	intronic	TYW1	NA	NA	NA	intronic	ENSG00000198874	NA	NA	NA	NA	NA	7q11.21	NA	NA	NA	NA	rs34574768	0.23	0.23	0.2	0.276957	0.2366	0.0744	0.232	0.4622	0.3088	0.21	0.09	0.24	0.45	0.2281	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.887508	NA	NA	0.151628	0.279619	NA	0.145	NA	3.383672
1314	5	843702	843702	G	A	intronic	ZDHHC11	NA	NA	NA	intronic	ENSG00000188818	NA	NA	NA	NA	NA	5p15.33	NA	NA	NA	NA	rs3863147	0.27	0.27	0.196	0.319888	0.3121	0.3075	0.2651	0.4682	0.1789	0.23	0.21	0.21	0.45	0.3043	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.082089	NA	NA	NA	NA	NA	NA	NA	3.3836
1314	9	119094789	119094789	A	C	intronic	PAPPA	NA	NA	NA	intronic	ENSG00000182752	NA	NA	NA	NA	NA	9q33.1	NA	NA	NA	NA	rs56276527	0.12	0.12	0.119	0.0880591	0.2336	NA	0.0893	0.0877	0.0286	0.23	NA	0.11	0.09	0.1573	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.303376	NA	NA	0.225581	0.091466	NA	0.145	NA	3.383519
1314	1	43011030	43011030	A	G	intronic	CCDC30	NA	NA	NA	intronic	ENSG00000186409	NA	NA	NA	NA	NA	1p34.2	NA	NA	NA	NA	rs11210668	0.25	0.25	0.238	0.300919	0.1869	0.4554	0.1628	0.2337	0.4479	0.19	0.4	0.17	0.23	0.2325	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.086426	NA	NA	0.197375	0.219693	NA	0.225	NA	3.383225
1314	3	125734308	125734308	G	A	intronic	SLC41A3	NA	NA	NA	intronic	ENSG00000114544	NA	NA	NA	NA	NA	3q21.2	NA	NA	NA	NA	rs2279821	0.16	0.16	0.15	0.172125	0.2207	0.1458	0.1326	0.1233	0.2434	0.22	0.12	0.16	0.12	0.1816	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.255895	NA	NA	0.214535	0.123241	NA	0.152	NA	3.383165
1314	22	24583879	24583879	T	C	intronic	SUSD2	NA	NA	NA	intronic	ENSG00000099994	NA	NA	NA	NA	NA	22q11.23	NA	NA	NA	NA	rs2070470	0.32	0.32	0.33	0.312101	0.2167	0.3988	0.2003	0.4123	0.2648	0.2	0.45	0.17	0.45	0.222	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.025003	NA	NA	0.178256	0.402816	NA	0.442	NA	3.383044
1314	4	5642161	5642161	A	G	intronic	EVC2	NA	NA	NA	intronic	ENSG00000173040	NA	NA	NA	NA	NA	4p16.2	NA	NA	NA	NA	rs751841	0.58	0.58	0.597	0.577676	0.6173	0.4782	0.5605	0.6316	0.5787	0.63	0.54	0.54	0.58	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.186347	NA	NA	NA	NA	NA	0.645	NA	3.3827
1314	12	52884283	52884283	A	G	intronic	KRT6A	NA	NA	NA	intronic	ENSG00000205420	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs298119	0.64	0.64	0.604	0.599241	0.6173	0.6875	0.6873	0.5772	0.4571	0.58	0.75	0.67	0.57	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.980479	NA	NA	NA	NA	NA	0.413	NA	3.3827
1314	16	68721340	68721340	G	A	intronic	CDH3	NA	NA	NA	intronic	ENSG00000062038	NA	NA	NA	NA	NA	16q22.1	NA	NA	NA	NA	rs2296406	0.62	0.62	0.617	0.597244	0.6173	0.5536	0.5476	0.6657	0.5644	0.62	0.58	0.57	0.69	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.393795	NA	NA	NA	NA	NA	0.703	NA	3.3827
1314	18	47406913	47406913	A	G	intronic	MYO5B	NA	NA	NA	intronic	ENSG00000167306	NA	NA	NA	NA	NA	18q21.1	NA	NA	NA	NA	rs1217632	0.6	0.6	0.596	0.593251	0.6173	0.5308	0.6686	0.5915	0.5818	0.61	0.56	0.66	0.58	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.484327	NA	NA	NA	NA	NA	0.601	NA	3.3827
1314	19	13356150	13356150	T	G	intronic	CACNA1A	NA	NA	NA	intronic	ENSG00000141837	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs16035	0.66	0.66	0.618	0.643171	0.6173	0.8373	0.6888	0.5038	0.6258	0.61	0.82	0.68	0.52	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.637228	NA	NA	NA	NA	NA	0.667	NA	3.3827
1314	15	52534344	52534344	G	A	exonic	MYO5C	NA	synonymous SNV	MYO5C:NM_018728:exon20:c.C2457T:p.R819R	exonic	ENSG00000128833	NA	synonymous SNV	ENSG00000128833:ENST00000261839:exon20:c.C2457T:p.R819R	NA	NA	15q21.2	NA	NA	NA	NA	rs3751631	0.44	0.44	0.394	0.382987	0.8171	0.0417	0.6167	0.1415	0.4489	0.81	0.03	0.68	0.15	0.6533	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.291535	NA	NA	0.813578	0.281891	ID=COSM1373488;OCCURENCE=1(large_intestine)	0.486	NA	3.3826886
1314	19	17760232	17760232	C	T	intronic	UNC13A	NA	NA	NA	intronic	ENSG00000130477	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs11665838	0.21	0.21	0.188	0.212061	0.3141	0.1587	0.1988	0.0817	0.3476	0.31	0.15	0.25	0.11	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.83901	NA	NA	0.303268	0.120665	NA	0.188	NA	3.382632
1314	3	125701099	125701099	T	C	intronic	ROPN1B	NA	NA	NA	intronic	ENSG00000114547	NA	NA	NA	NA	NA	3q21.2	NA	NA	NA	NA	rs2270986	0.16	0.16	0.153	0.173123	0.2197	0.1458	0.1326	0.1286	0.2423	0.22	0.13	0.16	0.12	0.182	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.789276	NA	NA	0.215698	0.126872	NA	0.152	NA	3.382602
1314	12	111894072	111894072	C	T	intronic	ATXN2	NA	NA	NA	intronic	ENSG00000204842	NA	NA	NA	NA	NA	12q24.12	NA	NA	NA	NA	rs2073950	0.23	0.23	0.221	0.23143	0.1998	0.3661	0.1513	0.1861	0.2434	0.2	0.38	0.16	0.17	0.2157	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.841313	NA	NA	0.202093	0.195869	NA	0.254	NA	3.382407
1314	6	150210994	150210994	T	C	ncRNA_intronic	LOC100652739	NA	NA	NA	ncRNA_intronic	ENSG00000223701,ENSG00000268592	NA	NA	NA	NA	NA	6q25.1	NA	NA	NA	NA	rs6939761	0.55	0.55	0.516	0.546326	0.4195	0.8859	0.5058	0.4554	0.4785	0.41	0.87	0.51	0.43	0.463	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.272399	NA	NA	0.40186	0.457331	NA	0.587	NA	3.3823066
1314	6	150210999	150210999	G	C	ncRNA_intronic	LOC100652739	NA	NA	NA	ncRNA_intronic	ENSG00000223701,ENSG00000268592	NA	NA	NA	NA	NA	6q25.1	NA	NA	NA	NA	rs3823021	0.55	0.55	0.527	0.546326	0.4195	0.8859	0.5058	0.4554	0.4785	0.41	0.87	0.51	0.43	0.4636	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.058604	NA	NA	0.401512	0.456877	NA	0.587	NA	3.3820546
1314	1	207679229	207679229	T	G	intronic	CR1	NA	NA	NA	intronic	ENSG00000203710	NA	NA	NA	NA	NA	1q32.2	NA	NA	NA	NA	rs4844599	0.2	0.2	0.185	0.271565	0.1839	0.3036	0.2709	0.1467	0.498	0.18	0.22	0.29	0.16	0.2469	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.647832	NA	NA	0.187286	0.158275	NA	0.21	NA	3.381914
1314	20	48301146	48301146	G	A	intronic	B4GALT5	NA	NA	NA	intronic	ENSG00000158470	NA	NA	NA	NA	NA	20q13.13	NA	NA	Name=19	NA	rs6512586	0.43	0.43	0.434	0.468051	0.5527	0.3938	0.4481	0.3457	0.637	0.54	0.36	0.49	0.3	0.5201	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.729729	NA	NA	0.545455	0.39726	NA	0.609	NA	3.381745
1314	14	23312875	23312875	G	C	intronic	MMP14	NA	NA	NA	intronic	ENSG00000157227	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs2236306	0.27	0.27	0.271	0.272764	0.2028	0.3552	0.1671	0.3321	0.2546	0.19	0.37	0.18	0.37	0.2235	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.897773	NA	NA	0.191977	0.295733	NA	0.254	NA	3.381723
1314	3	126227185	126227185	G	A	intronic	UROC1	NA	NA	NA	intronic	ENSG00000159650	NA	NA	NA	NA	NA	3q21.3	NA	NA	NA	NA	rs16837531	0.54	0.54	0.518	0.558307	0.6183	0.6845	0.5937	0.2186	0.8006	0.62	0.69	0.57	0.23	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.064776	NA	NA	NA	NA	NA	0.449	NA	3.3817
1314	9	137806344	137806344	C	T	intronic	FCN1	NA	NA	NA	intronic	ENSG00000085265	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs3012788	0.58	0.58	0.572	0.607228	0.6183	0.4653	0.4467	0.7005	0.7301	0.63	0.48	0.44	0.7	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.190237	NA	NA	NA	NA	NA	0.645	NA	3.3817
1314	19	10084422	10084422	C	T	intronic	COL5A3	NA	NA	NA	intronic	ENSG00000080573	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs2287812	0.17	0.17	0.174	0.134385	0.2068	0.2202	0.1225	0.0287	0.1227	0.21	0.25	0.14	0.05	0.1867	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.149115	NA	NA	0.225233	0.055631	NA	0.138	NA	3.381267
1314	12	56213297	56213297	G	T	intronic	ORMDL2	NA	NA	NA	intronic	ENSG00000123353,ENSG00000257390	NA	NA	NA	NA	NA	12q13.2	NA	NA	NA	NA	rs56108400	0.16	0.16	0.164	0.180312	0.1938	0.2738	0.1182	0.0113	0.3425	0.2	0.27	0.12	0.02	0.2095	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.688052	3.688052	NA	0.215465	0.048343	NA	0.159	NA	3.381235
1314	8	141568699	141568699	A	G	intronic	AGO2	NA	NA	NA	intronic	ENSG00000123908	NA	NA	NA	NA	NA	8q24.3	NA	NA	Name=12	NA	rs2292777	0.62	0.62	0.633	0.657748	0.5	0.6022	0.6124	0.8707	0.6217	0.51	0.6	0.59	0.85	0.5824	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.596161	NA	NA	0.536744	0.816614	NA	0.659	NA	3.380856
1314	5	70308251	70308251	C	T	exonic	NAIP	NA	synonymous SNV	NAIP:NM_004536:exon4:c.G492A:p.A164A	exonic	ENSG00000249437	NA	synonymous SNV	ENSG00000249437:ENST00000194097:exon2:c.G492A:p.A164A,ENSG00000249437:ENST00000508426:exon2:c.G492A:p.A164A,ENSG00000249437:ENST00000519014:exon2:c.G492A:p.A164A,ENSG00000249437:ENST00000517649:exon4:c.G492A:p.A164A	NA	NA	5q13.2	NA	NA	NA	NA	rs28409706	0.86	0.86	0.843	0.872404	0.7326	0.8958	0.8674	0.9818	0.8476	0.75	0.89	0.87	0.99	0.8021	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.91945	NA	NA	0.751164	0.946412	NA	0.899	NA	3.3808026
1314	1	79401927	79401927	A	G	intronic	ELTD1	NA	NA	NA	intronic	ENSG00000162618	NA	NA	NA	NA	NA	1p31.1	NA	NA	NA	NA	rs61770681	0.63	0.63	0.62	0.620807	0.6193	0.7044	0.6844	0.4939	0.6626	0.62	0.73	0.67	0.49	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.161631	NA	NA	NA	NA	NA	0.558	NA	3.3807
1314	3	53139506	53139506	C	T	intronic	RFT1	NA	NA	NA	intronic	ENSG00000163933	NA	NA	NA	NA	NA	3p21.1	NA	NA	NA	NA	rs2564942	0.53	0.53	0.548	0.519569	0.6193	0.7411	0.5994	0.2179	0.5399	0.58	0.68	0.56	0.24	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.713563	1.713563	NA	NA	NA	NA	NA	NA	3.3807
1314	3	53139507	53139507	A	G	intronic	RFT1	NA	NA	NA	intronic	ENSG00000163933	NA	NA	NA	NA	NA	3p21.1	NA	NA	NA	NA	rs2581774	0.53	0.53	0.549	0.520168	0.6193	0.7421	0.5994	0.2194	0.5399	0.58	0.68	0.56	0.24	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.047945	NA	NA	NA	NA	NA	NA	NA	3.3807
1314	9	137806334	137806334	A	G	intronic	FCN1	NA	NA	NA	intronic	ENSG00000085265	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs2989721	NA	NA	0.556	0.607628	0.6193	0.4653	0.4467	0.7005	0.7311	NA	NA	NA	NA	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.603212	NA	NA	NA	NA	NA	0.645	NA	3.3807
1314	19	57648433	57648433	T	C	intronic	ZIM3	NA	NA	NA	intronic	ENSG00000141946	NA	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs2370135	0.74	0.74	0.715	0.746006	0.6193	0.9276	0.7061	0.7579	0.7014	0.61	0.94	0.72	0.72	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.915093	NA	NA	NA	NA	NA	0.594	NA	3.3807
1314	1	169528580	169528580	C	T	intronic	F5	NA	NA	NA	intronic	ENSG00000198734	NA	NA	NA	NA	NA	1q24.2	NA	NA	NA	NA	rs6012	0.41	0.41	0.424	0.417931	0.1819	0.6647	0.2911	0.6551	0.1759	0.17	0.64	0.29	0.62	0.2613	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.150728	NA	NA	0.176279	0.574444	NA	0.399	NA	3.380521
1314	10	129859992	129859992	T	C	intronic	PTPRE	NA	NA	NA	intronic	ENSG00000132334	NA	NA	NA	NA	NA	10q26.2	NA	NA	Name=5	NA	rs4462251	0.53	0.53	0.491	0.535343	0.5258	0.5704	0.696	0.4206	0.5501	0.53	0.57	0.67	0.39	0.5688	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.350013	NA	NA	0.524884	0.437528	ID=COSN163826;OCCURENCE=1(NS)	0.543	NA	3.380516
1314	6	165715006	165715006	G	A	intronic	C6orf118	NA	NA	NA	intronic	ENSG00000112539	NA	NA	NA	NA	NA	6q27	NA	NA	NA	NA	rs479273	0.34	0.34	0.351	0.356629	0.328	0.2024	0.3775	0.4228	0.4407	0.34	0.23	0.36	0.44	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.047833	NA	NA	0.291813	0.377854	NA	0.333	NA	3.380187
1314	7	12263800	12263800	G	A	intronic	TMEM106B	NA	NA	NA	intronic	ENSG00000106460	NA	NA	NA	NA	NA	7p21.3	NA	NA	NA	NA	rs11509153	0.45	0.45	0.521	0.594848	0.4056	0.6508	0.5692	0.6793	0.636	0.33	0.59	0.45	0.49	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.375077	NA	NA	0.214214	0.476598	NA	NA	NA	3.380186
1314	4	70146230	70146230	G	A	exonic	UGT2B28	NA	synonymous SNV	UGT2B28:NM_001207004:exon1:c.G12A:p.K4K,UGT2B28:NM_053039:exon1:c.G12A:p.K4K	exonic	ENSG00000135226	NA	synonymous SNV	ENSG00000135226:ENST00000335568:exon1:c.G12A:p.K4K,ENSG00000135226:ENST00000511240:exon1:c.G12A:p.K4K	NA	NA	4q13.2	NA	NA	NA	NA	rs13139691	0.66	0.66	0.654	0.640176	0.7654	0.5952	0.67	0.5877	0.6074	0.78	0.58	0.69	0.55	0.7421	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.617566	NA	NA	0.779193	0.655914	ID=COSM1430686;OCCURENCE=1(large_intestine)	0.594	NA	3.3799736
1314	2	219339283	219339283	T	C	intronic	USP37	NA	NA	NA	intronic	ENSG00000135913	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs549026	0.72	0.72	0.686	0.736821	0.6203	0.9048	0.6527	0.7436	0.7342	0.63	0.9	0.67	0.69	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.365734	NA	NA	NA	NA	NA	0.63	NA	3.3797
1314	11	124792173	124792173	C	G	intronic	HEPACAM	NA	NA	NA	intronic	ENSG00000165478	NA	NA	NA	NA	NA	11q24.2	NA	NA	NA	NA	rs10893304	0.74	0.74	0.762	0.744808	0.6203	0.8919	0.5994	0.8676	0.6585	0.61	0.89	0.6	0.87	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.105294	NA	NA	NA	NA	NA	0.725	NA	3.3797
1314	17	80544855	80544855	T	C	intronic	FOXK2	NA	NA	NA	intronic	ENSG00000141568	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs1387545	0.59	0.59	0.576	0.619609	0.6203	0.4931	0.6744	0.6687	0.6442	0.58	0.49	0.69	0.62	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.049694	NA	NA	NA	NA	NA	0.623	NA	3.3797
1314	16	20448330	20448330	A	G	intronic	ACSM5	NA	NA	NA	intronic	ENSG00000183549	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs11646020	0.43	0.43	0.312	0.46865	0.2714	0.7569	0.2709	0.5356	0.4243	0.25	0.74	0.28	0.45	0.3498	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.079982	NA	NA	NA	NA	NA	0.399	NA	3.3788
1314	5	64906617	64906617	T	A	intronic	TRIM23	NA	NA	NA	intronic	ENSG00000113595	NA	NA	NA	NA	NA	5q12.3	NA	NA	NA	NA	rs37330	0.62	0.62	0.651	0.658746	0.6213	0.4137	0.5346	0.9221	0.682	0.64	0.41	0.56	0.9	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.533434	NA	NA	NA	NA	NA	0.819	NA	3.3787
1314	14	105063253	105063253	C	T	intronic	TMEM179	NA	NA	NA	intronic	ENSG00000258986	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs11629201	0.41	0.41	0.378	0.394569	0.6213	0.372	0.402	0.0946	0.5849	0.61	0.39	0.45	0.07	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.551427	NA	NA	NA	NA	NA	0.413	NA	3.3787
1314	16	70515600	70515600	T	G	intronic	COG4	NA	NA	NA	intronic	ENSG00000103051	NA	NA	NA	NA	NA	16q22.1	NA	NA	NA	NA	rs6416698	0.62	0.62	0.579	0.620208	0.6213	0.5129	0.6124	0.7716	0.5307	0.62	0.5	0.65	0.73	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.039548	NA	NA	NA	NA	NA	0.514	NA	3.3787
1314	18	12984340	12984340	A	C	intronic	SEH1L	NA	NA	NA	intronic	ENSG00000085415	NA	NA	NA	NA	NA	18p11.21	NA	NA	NA	NA	rs2902856	0.75	0.75	0.776	0.77476	0.6213	0.8105	0.6455	0.9493	0.7515	0.62	0.81	0.65	0.94	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.368908	NA	NA	NA	NA	NA	0.703	NA	3.3787
1314	19	55142623	55142623	G	T	intronic	LILRB1	NA	NA	NA	intronic	ENSG00000104972	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs2296368	0.46	0.46	0.396	0.458666	0.3032	0.5982	0.4856	0.5832	0.2873	0.29	0.58	0.45	0.57	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.023099	NA	NA	0.318353	0.557803	NA	0.514	NA	3.378447
1314	11	129321026	129321026	C	T	intronic	BARX2	NA	NA	NA	intronic	ENSG00000043039	NA	NA	NA	NA	NA	11q24.3	NA	NA	NA	NA	rs10791010	0.24	0.24	0.255	0.295327	0.1909	0.4008	0.1873	0.2194	0.4734	0.19	0.4	0.19	0.19	0.2395	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.350082	NA	NA	0.19118	0.220127	NA	0.159	NA	3.37842
1314	14	70478176	70478176	C	T	intronic	SMOC1	NA	NA	NA	intronic	ENSG00000198732	NA	NA	NA	NA	NA	14q24.2	NA	NA	NA	NA	rs116375526	NA	NA	NA	0.269768	0.3141	0.4187	0.3977	0.053	0.273	NA	NA	NA	NA	0.3076	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.701486	NA	NA	NA	NA	NA	NA	NA	3.3783
1314	11	9749554	9749554	T	G	intronic	SWAP70	NA	NA	NA	intronic	ENSG00000133789	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs56116109	NA	NA	NA	0.247604	0.3111	0.1696	0.1686	0.3124	0.2311	NA	NA	NA	NA	0.3108	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.977525	NA	NA	NA	NA	NA	NA	NA	3.3781
1314	12	117193323	117193323	C	G	intronic	RNFT2	NA	NA	NA	ncRNA_exonic	ENSG00000239374	NA	NA	NA	NA	NA	12q24.22	NA	NA	NA	NA	rs3926590	0.9	0.9	0.877	0.88139	0.9553	0.9236	0.951	0.7496	0.8906	0.95	0.94	0.95	0.75	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.685223	NA	NA	NA	NA	NA	0.884	NA	3.3780333
1314	19	35978567	35978567	T	C	intronic	KRTDAP	NA	NA	NA	intronic	ENSG00000188508	NA	NA	NA	NA	NA	19q13.12	NA	NA	NA	NA	rs62111717	0.13	0.13	0.096	0.125799	0.2237	0.0109	0.1124	0.1399	0.1339	0.21	0.01	0.12	0.16	0.1766	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.037706	NA	NA	0.221744	0.153881	NA	0.13	NA	3.377956
1314	6	41011266	41011266	C	T	intronic	TSPO2	NA	NA	NA	intronic	ENSG00000112212,ENSG00000124596	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs932399	0.22	0.22	0.217	0.256589	0.167	0.2688	0.2522	0.2655	0.3272	0.17	0.26	0.24	0.22	0.2423	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.168773	NA	NA	0.212791	0.251021	NA	0.188	NA	3.377909
1314	2	128281469	128281469	C	T	intronic	IWS1	NA	NA	NA	intronic	ENSG00000163166	NA	NA	NA	NA	NA	2q14.3	NA	NA	NA	NA	rs2303947	0.54	0.54	0.511	0.477236	0.6223	0.5794	0.67	0.2247	0.4274	0.63	0.57	0.69	0.25	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.033528	NA	NA	NA	NA	NA	0.391	NA	3.3777
1314	4	70620708	70620708	G	A	intronic	SULT1B1	NA	NA	NA	intronic	ENSG00000173597	NA	NA	NA	NA	NA	4q13.3	NA	NA	NA	NA	rs2134668	0.63	0.63	0.622	0.63139	0.6223	0.7212	0.6527	0.5552	0.636	0.61	0.73	0.61	0.57	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.195286	NA	NA	NA	NA	NA	0.623	NA	3.3777
1314	8	130486452	130486452	T	C	intergenic	LOC728724,GSDMC	dist=232966;dist=273990	NA	NA	ncRNA_intronic	ENSG00000229140	NA	NA	NA	NA	NA	8q24.21	NA	NA	NA	NA	rs2395901	0.61	0.61	0.604	0.655351	0.6223	0.4901	0.5403	0.7935	0.7546	0.65	0.46	0.57	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.891963	NA	NA	NA	NA	NA	0.587	NA	3.3777
1314	19	367313	367313	G	A	intronic	THEG	NA	NA	NA	intronic	ENSG00000105549	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs585487	0.55	0.55	0.57	0.519968	0.6223	0.4683	0.3588	0.6074	0.4642	0.62	0.47	0.41	0.63	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.399138	NA	NA	NA	NA	NA	0.616	NA	3.3777
1314	19	49527128	49527128	C	A	intronic	CGB	NA	NA	NA	intronic	ENSG00000104827,ENSG00000267335	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs35311610	0.53	0.53	0.428	0.523163	0.6223	0.377	0.6254	0.4962	0.5358	0.61	0.37	0.59	0.53	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011104	NA	NA	NA	NA	ID=COSN165869;OCCURENCE=1(breast)	0.022	NA	3.3777
1314	19	49527141	49527141	T	G	intronic	CGB	NA	NA	NA	intronic	ENSG00000104827,ENSG00000267335	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs34534856	0.53	0.53	0.49	0.531749	0.6223	0.377	0.6254	0.5272	0.5378	0.6	0.37	0.58	0.54	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.823047	NA	NA	NA	NA	ID=COSN165870;OCCURENCE=1(NS)	0.014	NA	3.3777
1314	3	119533733	119533733	G	A	intronic	NR1I2	NA	NA	NA	intronic	ENSG00000144852	NA	NA	NA	NA	NA	3q13.33	NA	NA	NA	NA	rs6785049	0.44	0.44	0.394	0.401358	0.6233	0.4038	0.6182	0.0356	0.5112	0.62	0.45	0.6	0.05	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.928182	NA	NA	NA	NA	NA	0.478	NA	3.3767
1314	5	78573970	78573970	T	C	intronic	JMY	NA	NA	NA	intronic	ENSG00000152409	NA	NA	NA	NA	NA	5q14.1	NA	NA	NA	NA	rs16876598	0.52	0.52	0.507	0.480631	0.6233	0.4851	0.5562	0.3654	0.4315	0.63	0.46	0.53	0.42	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.23407	NA	NA	NA	NA	NA	0.543	NA	3.3767
1314	7	142161792	142161792	G	A	intergenic	LOC730441,MTRNR2L6	dist=189724;dist=212339	NA	NA	downstream	ENSG00000211724	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs361445	0.11	0.11	0.08	0.103634	0.1233	0.1052	0.2709	0.025	0.0695	0.13	0.08	0.24	0.01	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.410733	NA	NA	NA	NA	NA	0.138	NA	3.3767
1314	10	61926728	61926728	A	G	intronic	ANK3	NA	NA	NA	intronic	ENSG00000151150	NA	NA	NA	NA	NA	10q21.2	NA	NA	NA	NA	rs11814723	0.59	0.59	0.596	0.596446	0.6233	0.5724	0.5778	0.5749	0.636	0.61	0.59	0.58	0.57	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.367012	NA	NA	NA	NA	NA	0.616	NA	3.3767
1314	11	3434986	3434986	A	T	intergenic	LOC650368,TRPC2	dist=4608;dist=212704	NA	NA	ncRNA_intronic	ENSG00000166492	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs11027054	0.51	0.51	0.409	0.502596	0.6233	0.7262	0.5403	0.0908	0.6779	0.62	0.65	0.53	0.15	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.093833	NA	NA	NA	NA	NA	0.058	NA	3.3767
1314	11	124954282	124954282	A	G	intronic	SLC37A2	NA	NA	NA	intronic	ENSG00000134955	NA	NA	NA	NA	NA	11q24.2	NA	NA	NA	NA	rs948270	0.64	0.64	0.662	0.666134	0.6233	0.4643	0.5173	0.9486	0.6421	0.62	0.47	0.54	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.094175	NA	NA	NA	NA	NA	0.696	NA	3.3767
1314	12	124206196	124206196	T	C	intronic	ATP6V0A2	NA	NA	NA	intronic	ENSG00000185344	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs1878077	0.74	0.74	0.738	0.749401	0.6233	0.9474	0.7695	0.702	0.7249	0.62	0.95	0.74	0.67	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.727267	NA	NA	NA	NA	NA	0.761	NA	3.3767
1314	17	25887541	25887541	C	T	intronic	KSR1	NA	NA	NA	intronic	ENSG00000141068	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs2948526	0.59	0.59	0.552	0.561302	0.6233	0.5982	0.696	0.4236	0.5501	0.62	0.62	0.66	0.44	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.922741	NA	NA	NA	NA	NA	0.478	NA	3.3767
1314	2	89196757	89196757	G	A	intergenic	MIR4436A,NONE	dist=84789;dist=NONE	NA	NA	UTR5	ENSG00000211599	ENST00000390244:c.-54G>A	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs3843805	0.33	0.33	0.305	0.332668	0.2217	0.502	0.3285	0.23	0.4141	0.22	0.58	0.3	0.21	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.390642	NA	NA	0.235164	0.232946	NA	0.188	NA	3.3764694
1314	1	21786251	21786251	T	C	intronic	NBPF3	NA	NA	NA	ncRNA_exonic	ENSG00000176378	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs4654750	0.8	0.8	0.776	0.785343	0.9573	0.8244	0.8588	0.4523	0.9663	0.95	0.8	0.89	0.49	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.918294	NA	NA	NA	NA	NA	0.239	NA	3.3760333
1314	9	8319806	8319806	C	T	intronic	PTPRD	NA	NA	NA	intronic	ENSG00000153707	NA	NA	NA	NA	NA	9p24.1	NA	NA	NA	NA	rs7873084	0.39	0.39	0.391	0.442093	0.1789	0.3869	0.379	0.733	0.4213	0.17	0.39	0.38	0.72	0.2851	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.489907	NA	NA	0.160037	0.646164	ID=COSN168469;OCCURENCE=2(large_intestine)	0.377	NA	3.375963
1314	2	71871236	71871236	A	G	intronic	DYSF	NA	NA	NA	intronic	ENSG00000135636	NA	NA	NA	NA	NA	2p13.2	NA	Name=FOXA1_(C-20),GATA3_(SC-268),p300	Name=6	NA	rs84182	0.85	0.85	0.853	0.838259	0.8827	0.8085	0.7104	0.9002	0.8303	0.88	0.8	0.75	0.93	0.8594	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.56047	NA	NA	0.882093	0.904448	NA	0.833	NA	3.375807
1314	7	50672907	50672907	T	C	intronic	GRB10	NA	NA	NA	intronic	ENSG00000106070	NA	NA	NA	NA	NA	7p12.1	NA	NA	NA	NA	rs4947709	0.58	0.58	NA	0.595048	0.6243	0.4931	0.6254	0.7035	0.502	0.61	0.44	0.64	0.66	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.303756	NA	NA	NA	NA	NA	0.486	NA	3.3757
1314	8	139189502	139189502	T	A	intronic	FAM135B	NA	NA	NA	intronic	ENSG00000147724	NA	NA	NA	NA	NA	8q24.23	NA	NA	NA	NA	rs6985633	0.8	0.8	0.804	0.811502	0.6243	0.9812	0.7305	0.9115	0.7515	0.63	0.98	0.72	0.91	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.478406	NA	NA	NA	NA	NA	0.739	NA	3.3757
1314	9	136184598	136184598	C	T	intergenic	ABO,SURF6	dist=33968;dist=12954	NA	NA	upstream	ENSG00000204031	NA	NA	NA	NA	NA	9q34.2	NA	NA	NA	NA	rs17150319	0.11	0.11	0.084	0.096845	0.1243	0.1617	0.0908	0.0174	0.1135	0.12	0.16	0.12	0.02	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.489218	NA	NA	NA	NA	NA	0.145	NA	3.3757
1314	10	95987313	95987313	C	T	intronic	PLCE1	NA	NA	NA	intronic	ENSG00000138193	NA	NA	NA	NA	NA	10q23.33	NA	NA	NA	NA	rs11187825	0.7	0.7	0.704	0.722644	0.6243	0.9276	0.5764	0.6891	0.7618	0.6	0.92	0.6	0.68	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.16519	NA	NA	NA	NA	NA	0.703	NA	3.3757
1314	10	115405466	115405466	G	A	intronic	NRAP	NA	NA	NA	intronic	ENSG00000197893	NA	NA	NA	NA	NA	10q25.3	NA	NA	NA	NA	rs3121477	0.59	0.59	0.595	0.564297	0.6243	0.7103	0.6715	0.2965	0.638	0.61	0.71	0.68	0.33	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.719125	NA	NA	NA	NA	NA	0.594	NA	3.3757
1314	11	49007280	49007280	C	A	intergenic	OR4A47,TRIM49B	dist=496006;dist=45872	NA	NA	downstream	ENSG00000254764	NA	NA	NA	NA	NA	11p11.12	NA	NA	NA	NA	rs11040204	0.16	0.16	0.109	0.173123	0.1243	0.1657	0.1254	0.289	0.1084	0.12	0.16	0.12	0.26	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.226269	NA	NA	NA	NA	NA	0.065	NA	3.3757
1314	16	9012686	9012686	G	A	intronic	USP7	NA	NA	NA	intronic	ENSG00000187555	NA	NA	NA	NA	NA	16p13.2	NA	NA	NA	NA	rs12708738	0.56	0.56	0.6	0.568291	0.6243	0.6329	0.4942	0.5061	0.5808	0.62	0.61	0.48	0.46	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.323773	NA	NA	NA	NA	NA	0.522	NA	3.3757
1314	19	14826849	14826849	T	C	intronic	ZNF333	NA	NA	NA	intronic	ENSG00000160961	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs4078586	0.75	0.75	0.736	0.812899	0.6243	0.8899	0.6988	0.9054	0.8834	0.64	0.85	0.65	0.88	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.493113	NA	NA	NA	NA	NA	0.725	NA	3.3757
1314	12	50824232	50824232	A	G	intronic	LARP4	NA	NA	NA	intronic	ENSG00000161813	NA	NA	NA	NA	NA	12q13.12	NA	NA	NA	NA	rs11612002	0.18	0.18	0.153	0.166933	0.1978	0.3165	0.2291	0.0166	0.1401	0.2	0.28	0.18	0.01	0.2177	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.26698	NA	NA	0.208862	0.052235	ID=COSN164243;OCCURENCE=1(breast)	0.145	NA	3.375638
1315	1	43279094	43279094	T	C	intronic	CCDC23	NA	NA	NA	intronic	ENSG00000177868	NA	NA	NA	NA	NA	1p34.2	NA	NA	NA	NA	rs323714	0.65	0.65	0.639	0.710463	0.6252	0.7073	0.6484	0.7148	0.8395	0.62	0.66	0.66	0.7	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.46642	NA	NA	NA	NA	NA	0.645	NA	3.3748
1315	2	206614646	206614646	T	G	intronic	NRP2	NA	NA	NA	intronic	ENSG00000118257	NA	NA	NA	NA	NA	2q33.3	NA	NA	NA	NA	rs10932123	0.59	0.59	0.557	0.548722	0.6252	0.504	0.6124	0.6316	0.3589	0.62	0.47	0.63	0.66	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.680137	NA	NA	NA	NA	NA	0.493	NA	3.3748
1315	3	12829315	12829315	G	A	intergenic	TMEM40,CAND2	dist=28507;dist=8856	NA	NA	ncRNA_exonic	ENSG00000213943	NA	NA	NA	NA	NA	3p25.2	NA	NA	NA	NA	rs1985428	0.5	0.5	0.492	0.491813	0.6252	0.4335	0.4438	0.5681	0.3456	0.61	0.39	0.43	0.5	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.380304	NA	NA	NA	NA	NA	0.442	NA	3.3748
1315	8	99016092	99016092	A	G	intronic	MATN2	NA	NA	NA	intronic	ENSG00000132561	NA	NA	NA	NA	NA	8q22.2	NA	NA	NA	NA	rs10955143	0.53	0.53	0.533	0.52496	0.6252	0.2103	0.6182	0.7148	0.4233	0.64	0.2	0.59	0.7	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.291486	NA	NA	NA	NA	NA	0.63	NA	3.3748
1315	19	14805719	14805719	T	C	intronic	ZNF333	NA	NA	NA	intronic	ENSG00000160961	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs3850141	0.75	0.75	0.754	0.811701	0.6252	0.8869	0.6916	0.9054	0.8845	0.64	0.85	0.65	0.88	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.784996	NA	NA	NA	NA	NA	0.725	NA	3.3748
1315	19	52008530	52008530	G	A	intergenic	SIGLEC12,SIGLEC6	dist=3487;dist=14254	NA	NA	ncRNA_exonic	ENSG00000268839	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs2864101	0.55	0.55	0.515	0.566893	0.6252	0.372	0.719	0.5469	0.6268	0.63	0.37	0.69	0.54	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.211215	NA	NA	NA	NA	NA	0.522	NA	3.3748
1315	17	45897531	45897531	C	A	intronic	OSBPL7	NA	NA	NA	intronic	ENSG00000006025	NA	NA	NA	NA	NA	17q21.32	NA	Name=ZBTB7A_(SC-34508),NRSF	Name=15	NA	rs1985407	0.75	0.75	0.718	0.733826	0.8907	0.7282	0.7464	0.587	0.7679	0.91	0.68	0.76	0.58	0.8344	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.934099	NA	NA	0.900233	0.651611	ID=COSN165453;OCCURENCE=1(breast)	0.674	NA	3.374667
1315	14	24838621	24838621	C	T	intronic	NFATC4	NA	NA	NA	UTR5	ENSG00000100968	ENST00000557451:c.-194C>T,ENST00000554661:c.-194C>T,ENST00000554344:c.-194C>T	NA	NA	NA	NA	14q12	NA	NA	NA	NA	rs1955915	0.52	0.52	0.482	0.5627	0.3469	0.7163	0.5418	0.5915	0.6022	0.35	0.71	0.49	0.58	0.4458	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.542386	NA	NA	NA	NA	NA	0.384	NA	3.3739667
1315	2	152382329	152382329	G	A	intronic	NEB	NA	NA	NA	intronic	ENSG00000183091	NA	NA	NA	NA	NA	2q23.3	NA	NA	NA	NA	rs7597735	0.65	0.65	0.628	0.594649	0.6262	0.7123	0.6715	0.528	0.4765	0.61	0.74	0.68	0.57	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.077409	NA	NA	NA	NA	NA	0.587	NA	3.3738
1315	13	111319884	111319884	G	A	intronic	CARS2	NA	NA	NA	intronic	ENSG00000134905	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs9521884	0.54	0.54	0.53	0.513778	0.6262	0.5585	0.464	0.3903	0.5542	0.63	0.58	0.48	0.39	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.611802	NA	NA	NA	NA	NA	0.543	NA	3.3738
1315	14	91666018	91666018	G	A	intronic	C14orf159	NA	NA	NA	intronic	ENSG00000133943	NA	NA	NA	NA	NA	14q32.11	NA	NA	NA	NA	rs12886645	0.53	0.53	0.499	0.464058	0.6262	0.6637	0.6066	0.1293	0.4427	0.63	0.7	0.57	0.16	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.177236	NA	NA	NA	NA	NA	0.486	NA	3.3738
1315	20	1277157	1277157	G	C	intronic	SNPH	NA	NA	NA	intronic	ENSG00000101298	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs6109320	0.65	0.65	0.659	0.630391	0.6262	0.5764	0.6484	0.7375	0.5327	0.62	0.57	0.65	0.77	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.836251	3.836251	NA	NA	NA	NA	0.594	NA	3.3738
1315	17	40725656	40725656	G	C	intronic	PSMC3IP	NA	NA	NA	intronic	ENSG00000131470	NA	NA	NA	NA	NA	17q21.2	NA	Name=ZNF263	NA	NA	rs2292752	0.54	0.54	0.543	0.585264	0.5229	0.4534	0.5159	0.708	0.6687	0.53	0.45	0.47	0.7	0.5617	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.865545	1.865545	NA	0.541744	0.684067	NA	0.667	NA	3.373656
1315	6	31113214	31113214	C	A	intronic	CCHCR1	NA	NA	NA	intronic	ENSG00000204536	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs1265074	0.24	0.24	0.214	0.254792	0.2097	0.3452	0.3329	0.1891	0.2413	0.21	0.29	0.31	0.19	0.2276	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.821126	2.821126	NA	0.189186	0.19133	NA	0.21	NA	3.373514
1315	16	56864398	56864398	C	T	intronic	NUP93	NA	NA	NA	intronic	ENSG00000102900	NA	NA	NA	NA	NA	16q13	NA	NA	Name=2	NA	rs1561140	0.65	0.65	0.653	0.684105	0.508	0.8304	0.6239	0.7481	0.6708	0.49	0.83	0.6	0.75	0.5826	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.598627	NA	NA	0.53593	0.696315	NA	0.587	NA	3.37347
1315	11	61508074	61508074	C	T	intronic	DAGLA	NA	NA	NA	intronic	ENSG00000134780	NA	NA	NA	NA	NA	11q12.2	NA	NA	NA	NA	rs11828739	0.19	0.19	0.155	0.232628	0.2087	0.1508	0.2478	0.2141	0.3558	0.22	0.13	0.27	0.17	0.2256	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.173931	NA	NA	0.192487	0.195277	NA	0.254	NA	3.373213
1315	9	2073514	2073514	A	T	intronic	SMARCA2	NA	NA	NA	intronic	ENSG00000080503	NA	NA	NA	NA	NA	9p24.3	NA	NA	NA	NA	rs7864080	0.43	0.43	0.436	0.454273	0.2982	0.3234	0.4582	0.7897	0.2935	0.31	0.32	0.42	0.77	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.615006	NA	NA	0.328727	0.734056	NA	0.486	NA	3.373073
1315	6	38746263	38746263	A	T	intronic	DNAH8	NA	NA	NA	intronic	ENSG00000124721	NA	NA	NA	NA	NA	6p21.2	NA	NA	NA	NA	rs1738260	0.3	0.3	0.273	0.291933	0.1948	0.4494	0.3905	0.2262	0.2485	0.21	0.46	0.34	0.21	0.2383	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.661139	NA	NA	0.194063	0.212211	NA	0.348	NA	3.372837
1315	1	165175374	165175374	G	A	intronic	LMX1A	NA	NA	NA	intronic	ENSG00000162761	NA	NA	NA	NA	NA	1q23.3	NA	NA	NA	NA	rs4656435	0.47	0.47	0.46	0.451478	0.6272	0.2778	0.4553	0.4614	0.4335	0.63	0.28	0.48	0.42	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.936405	NA	NA	NA	NA	NA	0.478	NA	3.3728
1315	6	47641307	47641307	G	C	intronic	GPR111	NA	NA	NA	intronic	ENSG00000164393	NA	NA	NA	NA	NA	6p12.3	NA	NA	NA	NA	rs1411049	0.48	0.48	0.495	0.516374	0.6272	0.3085	0.4352	0.4697	0.7372	0.62	0.3	0.49	0.48	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.411628	NA	NA	NA	NA	NA	0.428	NA	3.3728
1315	7	2269552	2269552	G	T	intronic	MAD1L1	NA	NA	NA	intronic	ENSG00000002822	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs1637728	0.69	0.69	0.68	0.693091	0.6272	0.62	0.7032	0.8449	0.6237	0.61	0.63	0.71	0.87	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.293368	NA	NA	NA	NA	NA	0.775	NA	3.3728
1315	17	7246940	7246940	T	G	intronic	ACAP1	NA	NA	NA	intronic	ENSG00000072818	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs3809829	0.6	0.6	0.585	0.597644	0.6272	0.4415	0.5908	0.7784	0.4888	0.61	0.46	0.58	0.78	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.084703	NA	NA	NA	NA	NA	0.674	NA	3.3728
1315	19	10752968	10752968	A	G	intronic	SLC44A2	NA	NA	NA	intronic	ENSG00000129353	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs10405617	0.72	0.72	0.717	0.774361	0.6272	0.7113	0.7925	0.9493	0.7413	0.63	0.65	0.75	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.645967	NA	NA	NA	NA	NA	0.681	NA	3.3728
1315	19	52003058	52003058	C	T	intronic	SIGLEC12	NA	NA	NA	intronic	ENSG00000254521	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs10420446	0.55	0.55	0.542	0.565895	0.6272	0.37	0.7219	0.5522	0.6125	0.63	0.37	0.7	0.54	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.400274	NA	NA	NA	NA	NA	0.522	NA	3.3728
1315	19	52003089	52003089	C	T	intronic	SIGLEC12	NA	NA	NA	intronic	ENSG00000254521	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs10420457	0.55	0.55	0.541	0.565695	0.6272	0.37	0.7219	0.5514	0.6125	0.63	0.37	0.7	0.54	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.26509	NA	NA	NA	NA	NA	0.522	NA	3.3728
1315	19	52008293	52008293	T	A	intergenic	SIGLEC12,SIGLEC6	dist=3250;dist=14491	NA	NA	downstream	ENSG00000268839	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs75199020	0.11	0.11	0.114	0.091853	0.1272	0.001	0.0735	0.1899	0.0297	0.13	NA	0.09	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.270967	NA	NA	NA	NA	NA	0.152	NA	3.3728
1315	20	62599141	62599141	C	T	intronic	ZNF512B	NA	NA	NA	intronic	ENSG00000196700	NA	NA	NA	NA	NA	20q13.33	NA	NA	NA	NA	rs817331	0.13	0.13	0.125	0.134385	0.2197	0.0149	0.1239	0.1505	0.1554	0.22	0.02	0.14	0.13	0.1954	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.167183	NA	NA	0.212209	0.183386	NA	0.188	NA	3.372691
1315	19	7734369	7734369	C	T	intronic	RETN	NA	NA	NA	intronic	ENSG00000104918	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs3219177	0.14	0.14	0.131	0.165735	0.1988	0.0208	0.1268	0.1536	0.3252	0.2	0.03	0.15	0.16	0.2032	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.53087	1.53087	NA	0.225465	0.160009	NA	0.188	NA	3.372535
1315	5	13820656	13820656	G	A	intronic	DNAH5	NA	NA	NA	intronic	ENSG00000039139	NA	NA	NA	NA	NA	5p15.2	NA	NA	NA	NA	rs6554817	0.28	0.28	0.263	0.260583	0.2127	0.5476	0.1787	0.1884	0.1697	0.22	0.5	0.17	0.21	0.2133	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.928834	NA	NA	0.20186	0.187472	NA	0.232	NA	3.37214
1315	6	44268135	44268135	C	T	UTR3	AARS2	NM_020745:c.*149G>A	NA	NA	UTR3	ENSG00000124608	ENST00000244571:c.*149G>A	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs325009	0.9	0.9	0.895	0.879593	0.9612	0.998	0.951	0.6354	0.953	0.96	1	0.95	0.66	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.91259	NA	NA	NA	NA	NA	0.87	NA	3.3721334
1315	2	182430120	182430120	C	A	intronic	CERKL	NA	NA	NA	intronic	ENSG00000188452	NA	NA	NA	NA	NA	2q31.3	NA	NA	NA	NA	rs7604902	0.24	0.24	0.247	0.248403	0.2157	0.1389	0.304	0.3865	0.1687	0.21	0.16	0.27	0.36	0.2114	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.275573	NA	NA	0.200784	0.335071	NA	0.174	NA	3.372116
1315	4	104003993	104003993	A	C	intronic	BDH2	NA	NA	NA	intronic	ENSG00000164038,ENSG00000164039	NA	NA	NA	NA	NA	4q24	NA	NA	NA	NA	rs56412006	0.23	0.23	0.22	0.272564	0.2087	0.1597	0.2334	0.3873	0.3272	0.2	0.14	0.23	0.37	0.2213	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.008013	NA	NA	0.198023	0.33409	NA	0.333	NA	3.371977
1315	1	120015567	120015567	C	G	intergenic	HSD3B2,HSD3B1	dist=49905;dist=34259	NA	NA	ncRNA_intronic	ENSG00000187481	NA	NA	NA	NA	NA	1p12	NA	NA	NA	NA	rs4659181	0.64	0.64	0.638	0.644569	0.6282	0.6359	0.7507	0.5749	0.6892	0.63	0.66	0.71	0.6	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.783932	NA	NA	NA	NA	NA	0.652	NA	3.3718
1315	2	24432620	24432620	A	G	intronic	ITSN2	NA	NA	NA	intronic	ENSG00000198399	NA	NA	NA	NA	NA	2p23.3	NA	NA	NA	NA	rs2303294	0.67	0.67	0.628	0.676917	0.6282	0.7877	0.7608	0.5779	0.6871	0.63	0.78	0.73	0.56	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.17188	NA	NA	NA	NA	NA	0.58	NA	3.3718
1315	2	233752639	233752639	A	T	intronic	NGEF	NA	NA	NA	intronic	ENSG00000066248	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs2250665	0.66	0.66	0.658	0.594649	0.6282	0.6319	0.6441	0.6921	0.3548	0.63	0.67	0.66	0.68	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.674058	NA	NA	NA	NA	NA	0.681	NA	3.3718
1315	5	153406644	153406644	C	T	intronic	FAM114A2	NA	NA	NA	intronic	ENSG00000055147	NA	NA	NA	NA	NA	5q33.2	NA	NA	NA	NA	rs9324765	0.71	0.71	0.702	0.715855	0.6282	0.8581	0.7161	0.6256	0.7812	0.64	0.87	0.67	0.64	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.622551	NA	NA	NA	NA	NA	0.674	NA	3.3718
1315	9	36013160	36013160	A	G	intergenic	OR2S2,RECK	dist=55009;dist=23750	NA	NA	upstream	ENSG00000228307	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs6476504	0.23	0.23	0.233	0.246406	0.1282	0.2748	0.1239	0.4153	0.1973	0.12	0.27	0.13	0.42	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.855309	3.855309	NA	NA	NA	NA	0.312	NA	3.3718
1315	9	139815053	139815053	G	A	intronic	TRAF2	NA	NA	NA	intronic	ENSG00000127191	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs10781522	0.6	0.6	0.625	0.625799	0.6282	0.7173	0.4366	0.5658	0.7444	0.62	0.75	0.46	0.52	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.526017	NA	NA	NA	NA	NA	0.659	NA	3.3718
1315	12	124207098	124207098	T	C	intronic	ATP6V0A2	NA	NA	NA	intronic	ENSG00000185344	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs7301641	0.74	0.74	0.73	0.750998	0.6282	0.9474	0.7723	0.7027	0.7249	0.63	0.95	0.74	0.67	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.385727	NA	NA	NA	NA	NA	0.761	NA	3.3718
1315	7	142198067	142198067	A	G	intergenic	LOC730441,MTRNR2L6	dist=225999;dist=176064	NA	NA	ncRNA_exonic	ENSG00000241657	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs17277	0.42	0.42	0.397	0.427117	0.3151	0.5347	0.3631	0.4788	0.407	0.31	0.57	0.35	0.47	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.01326	NA	NA	0.313325	0.442919	NA	0.312	NA	3.371575
1315	5	148627252	148627252	G	A	intronic	ABLIM3	NA	NA	NA	ncRNA_intronic	ENSG00000248647,ENSG00000253406	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs9325136	0.5	0.5	0.495	0.527756	0.4205	0.6171	0.415	0.6407	0.4734	0.41	0.57	0.4	0.65	0.5413	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.957236	NA	NA	NA	NA	NA	0.551	NA	3.3715333
1315	14	93693422	93693422	C	T	UTR3	UBR7	NM_175748:c.*41C>T	NA	NA	UTR3	ENSG00000012963	ENST00000416753:c.*41C>T,ENST00000013070:c.*41C>T,ENST00000553674:c.*1020C>T,ENST00000555329:c.*41C>T	NA	NA	NA	NA	14q32.12	NA	NA	NA	NA	rs2905	0.23	0.23	0.202	0.194489	0.329	0.2669	0.281	0.0204	0.1554	0.33	0.26	0.28	0.02	0.2996	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.7741	NA	NA	0.333256	0.067862	NA	0.188	NA	3.3714774
1315	10	92645687	92645687	A	G	intronic	RPP30	NA	NA	NA	intronic	ENSG00000148688	NA	NA	NA	NA	NA	10q23.31	NA	NA	NA	NA	rs4144422	0.25	0.25	0.251	0.267173	0.2058	0.1667	0.1902	0.4644	0.2219	0.2	0.18	0.19	0.43	0.2192	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.03437	NA	NA	0.203583	0.422379	NA	0.268	NA	3.371417
1315	7	50544314	50544314	C	T	intronic	DDC	NA	NA	NA	intronic	ENSG00000132437	NA	NA	NA	NA	NA	7p12.1	NA	NA	NA	NA	rs4490786	0.2	0.2	0.209	0.198283	0.2197	0.1349	0.2378	0.2201	0.184	0.21	0.17	0.17	0.25	0.2089	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.614688	NA	NA	0.2	0.228098	ID=COSM150294;OCCURENCE=1(stomach)	0.312	NA	3.3714
1315	22	50316835	50316835	T	C	intronic	CRELD2	NA	NA	NA	intronic	ENSG00000184164	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs7410304	0.27	0.27	0.276	0.317292	0.2058	0.1796	0.1657	0.5613	0.3517	0.22	0.18	0.17	0.54	0.2312	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.054412	NA	NA	0.191639	0.455051	NA	0.312	NA	3.371361
1315	7	142198062	142198062	C	A	intergenic	LOC730441,MTRNR2L6	dist=225994;dist=176069	NA	NA	ncRNA_exonic	ENSG00000241657	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs17278	0.42	0.42	0.392	0.427117	0.3151	0.5347	0.3631	0.4788	0.407	0.31	0.58	0.35	0.47	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.501412	NA	NA	0.313639	0.442919	NA	0.312	NA	3.371261
1315	4	113377127	113377127	G	T	intergenic	ALPK1,NEUROG2	dist=13363;dist=57545	NA	NA	ncRNA_exonic	ENSG00000248697	NA	NA	NA	NA	NA	4q25	NA	NA	NA	NA	rs231266	0.63	0.63	0.647	0.628195	0.6292	0.6508	0.4957	0.7126	0.5838	0.62	0.66	0.52	0.7	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.703245	NA	NA	NA	NA	NA	0.594	NA	3.3708
1315	10	33232956	33232956	G	C	intronic	ITGB1	NA	NA	NA	intronic	ENSG00000150093	NA	NA	NA	NA	NA	10p11.22	NA	NA	NA	NA	rs2488335	0.4	0.4	0.364	0.3752	0.6292	0.3313	0.4928	0.0877	0.4642	0.63	0.31	0.51	0.09	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.091632	NA	NA	NA	NA	NA	0.413	NA	3.3708
1315	19	10787744	10787744	C	G	intronic	ILF3	NA	NA	NA	intronic	ENSG00000129351	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs1982075	0.72	0.72	0.726	0.775759	0.6292	0.7063	0.7939	0.9508	0.7485	0.62	0.65	0.75	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.236561	NA	NA	NA	NA	NA	0.674	NA	3.3708
1315	3	122004098	122004098	A	T	UTR3	CASR	NM_000388:c.*60A>T,NM_001178065:c.*60A>T	NA	NA	UTR3	ENSG00000036828	ENST00000490131:c.*60A>T,ENST00000498619:c.*60A>T,ENST00000296154:c.*60A>T	NA	NA	NA	NA	3q21.1	NA	NA	NA	NA	rs4677948	0.92	0.92	0.911	0.920128	0.9632	0.9802	0.9798	0.7844	0.955	0.96	0.99	0.98	0.75	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.19076	NA	NA	NA	NA	NA	0.92	NA	3.3701334
1315	11	82561339	82561339	G	A	intronic	PRCP	NA	NA	NA	intronic	ENSG00000137509	NA	NA	NA	NA	NA	11q14.1	NA	NA	NA	NA	rs13306597	0.24	0.24	0.229	0.26258	0.1988	0.1796	0.2651	0.3616	0.2781	0.2	0.18	0.29	0.35	0.228	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.978522	NA	NA	0.20314	0.343849	NA	0.159	NA	3.37006
1315	22	41833116	41833116	C	T	exonic	TOB2	NA	synonymous SNV	TOB2:NM_016272:exon2:c.G234A:p.A78A	exonic	ENSG00000183864	NA	synonymous SNV	ENSG00000183864:ENST00000327492:exon2:c.G234A:p.A78A,ENSG00000183864:ENST00000434408:exon2:c.G234A:p.A78A	NA	NA	22q13.2	NA	NA	NA	NA	rs202641	0.74	0.74	0.768	0.71266	0.7773	0.9435	0.5202	0.6619	0.6135	0.78	0.94	0.51	0.63	0.7318	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.29085	NA	NA	0.787558	0.672492	NA	0.645	NA	3.3700086
1315	16	90109711	90109711	A	G	exonic	GAS8	NA	synonymous SNV	GAS8:NM_001481:exon11:c.A1395G:p.T465T	exonic	ENSG00000141013	NA	synonymous SNV	ENSG00000141013:ENST00000268699:exon11:c.A1395G:p.T465T,ENSG00000141013:ENST00000536122:exon11:c.A1320G:p.T440T	NA	NA	16q24.3	NA	NA	NA	NA	rs3743825	0.83	0.83	0.811	0.844249	0.7386	0.8472	0.8112	0.9834	0.7853	0.74	0.83	0.8	0.98	0.7945	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.058256	NA	NA	0.763721	0.957234	NA	0.87	NA	3.3698456
1315	2	152403014	152403014	C	T	intronic	NEB	NA	NA	NA	intronic	ENSG00000183091	NA	NA	NA	NA	NA	2q23.3	NA	NA	NA	NA	rs4664486	0.59	0.59	0.567	0.524361	0.6302	0.5536	0.6599	0.444	0.3978	0.62	0.6	0.65	0.49	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.990388	NA	NA	NA	NA	NA	0.587	NA	3.3698
1315	8	19680736	19680736	T	C	intronic	INTS10	NA	NA	NA	intronic	ENSG00000104613	NA	NA	NA	NA	NA	8p21.3	NA	NA	NA	NA	rs12547934	0.64	0.64	0.627	0.643371	0.6302	0.6429	0.549	0.7126	0.6309	0.63	0.62	0.57	0.7	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.032427	NA	NA	NA	NA	NA	0.703	NA	3.3698
1315	11	11292859	11292859	G	T	intronic	GALNT18	NA	NA	NA	intronic	ENSG00000110328	NA	NA	NA	NA	NA	11p15.3	NA	NA	NA	NA	rs12282460	0.2	0.2	0.161	0.174321	0.2187	0.2381	0.2291	0.0719	0.1626	0.22	0.23	0.22	0.1	0.2015	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.669201	NA	NA	0.210293	0.104725	NA	0.181	NA	3.369507
1315	17	41170898	41170898	T	C	intronic	VAT1	NA	NA	NA	UTR5	ENSG00000108828	ENST00000589828:c.-97A>G	NA	NA	NA	NA	17q21.31	NA	NA	NA	NA	rs429464	0.84	0.84	0.847	0.800319	0.7972	0.9187	0.8184	0.7511	0.7352	0.8	0.94	0.79	0.82	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.065895	NA	NA	NA	NA	NA	0.833	NA	3.3694667
1315	16	58327646	58327646	A	G	exonic	PRSS54	NA	synonymous SNV	PRSS54:NM_001080492:exon3:c.T75C:p.Y25Y	exonic	ENSG00000103023	NA	synonymous SNV	ENSG00000103023:ENST00000219301:exon3:c.T75C:p.Y25Y,ENSG00000103023:ENST00000567164:exon3:c.T75C:p.Y25Y,ENSG00000103023:ENST00000569727:exon3:c.T75C:p.Y25Y	NA	NA	16q21	NA	NA	NA	NA	rs2288012	0.74	0.74	0.745	0.733427	0.7773	0.631	0.6167	0.9115	0.636	0.79	0.59	0.65	0.91	0.7445	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.478936	NA	NA	0.775465	0.886943	ID=COSM148089;OCCURENCE=1(stomach)	0.804	NA	3.3694016
1315	12	56091617	56091617	A	G	intronic	ITGA7	NA	NA	NA	intronic	ENSG00000135424	NA	NA	NA	NA	NA	12q13.2	NA	NA	NA	NA	rs2293412	0.68	0.68	0.605	0.702676	0.497	0.9355	0.6715	0.6679	0.7434	0.51	0.93	0.64	0.67	0.6206	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.165095	NA	NA	0.513023	0.66591	NA	0.609	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000079975.1;CLNDSDB=.;CLNDSDBID=.	3.369377
1315	19	54544189	54544189	C	T	UTR3	VSTM1	NM_198481:c.*26G>A	NA	NA	UTR3	ENSG00000189068	ENST00000338372:c.*26G>A,ENST00000419106:c.*26G>A,ENST00000447872:c.*234G>A,ENST00000376626:c.*26G>A	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs2303558	0.23	0.23	0.207	0.200879	0.3569	0.0665	0.33	0.1505	0.1554	0.35	0.08	0.31	0.16	0.2767	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.543295	NA	NA	0.330814	0.174989	NA	0.225	NA	3.3689194
1315	1	11807426	11807426	C	T	intronic	AGTRAP	NA	NA	NA	intronic	ENSG00000177674	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs12752700	0.61	0.61	0.569	0.555911	0.6312	0.8839	0.6758	0.177	0.5675	0.63	0.89	0.65	0.2	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.061924	NA	NA	NA	NA	NA	0.428	NA	3.3688
1315	7	2257467	2257467	A	G	intronic	MAD1L1	NA	NA	NA	intronic	ENSG00000002822	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs1639914	0.69	0.69	0.69	0.701278	0.6312	0.6141	0.7046	0.8525	0.6564	0.61	0.62	0.71	0.87	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.155006	NA	NA	NA	NA	NA	0.775	NA	3.3688
1315	7	2260715	2260715	G	T	intronic	MAD1L1	NA	NA	NA	intronic	ENSG00000002822	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs1639917	0.65	0.65	0.665	0.670927	0.6312	0.5069	0.6441	0.8517	0.6554	0.61	0.52	0.65	0.87	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.766091	NA	NA	NA	NA	NA	0.768	NA	3.3688
1315	14	44589970	44589970	T	C	intergenic	NONE,FSCB	dist=NONE;dist=383384	NA	NA	ncRNA_intronic	ENSG00000258969	NA	NA	NA	NA	NA	14q21.2	NA	NA	NA	NA	rs3809431	0.64	0.64	0.618	0.626597	0.6312	0.6647	0.611	0.593	0.6391	0.62	0.68	0.65	0.6	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.650079	NA	NA	NA	NA	NA	0.616	NA	3.3688
1315	19	14862517	14862517	A	G	intronic	EMR2	NA	NA	NA	intronic	ENSG00000127507	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs3752189	0.44	0.44	NA	0.494209	0.2664	0.5169	0.3833	0.6536	0.5685	0.29	0.51	0.35	0.64	0.3649	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.891212	NA	NA	NA	NA	NA	0.377	NA	3.3687
1315	1	63920515	63920515	C	G	intronic	ITGB3BP	NA	NA	NA	intronic	ENSG00000142856	NA	NA	NA	NA	NA	1p31.3	NA	NA	NA	NA	rs17319708	0.12	0.12	0.092	0.0872604	0.2266	0.0268	0.1859	0.0061	0.046	0.22	0.03	0.21	0.0041	0.1766	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.068691	NA	NA	0.228451	0.04319	NA	0.123	NA	3.368349
1315	16	84441989	84441989	C	T	intronic	ATP2C2	NA	NA	NA	intronic	ENSG00000064270	NA	NA	NA	NA	NA	16q24.1	NA	NA	NA	NA	rs9935544	0.27	0.27	0.306	0.272564	0.2197	0.2331	0.1556	0.5204	0.1155	0.21	0.2	0.17	0.52	0.2127	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.89835	NA	NA	0.199449	0.469552	NA	0.355	NA	3.368151
1315	1	53364976	53364976	A	G	intronic	ECHDC2	NA	NA	NA	intronic	ENSG00000121310	NA	NA	NA	NA	NA	1p32.3	NA	NA	NA	NA	rs576891	0.58	0.58	0.633	0.588059	0.6322	0.256	0.4294	0.8911	0.5879	0.63	0.3	0.49	0.87	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.771785	1.771785	NA	NA	NA	NA	0.609	NA	3.3678
1315	11	18931819	18931819	C	T	intergenic	PTPN5,MRGPRX1	dist=118430;dist=23541	NA	NA	downstream	ENSG00000255536	NA	NA	NA	NA	NA	11p15.1	NA	NA	NA	NA	rs11024877	0.08	0.08	0.084	0.0678914	0.1322	NA	0.0692	0.1074	0.0174	0.12	NA	0.08	0.13	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.053845	NA	NA	NA	NA	NA	0.051	NA	3.3678
1315	12	130839645	130839645	A	C	intronic	PIWIL1	NA	NA	NA	intronic	ENSG00000125207	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs1874521	0.45	0.45	0.452	0.489816	0.6322	0.377	0.3718	0.3487	0.7342	0.61	0.4	0.41	0.32	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.517612	NA	NA	NA	NA	NA	0.543	NA	3.3678
1315	19	8137908	8137908	C	T	intronic	FBN3	NA	NA	NA	intronic	ENSG00000142449	NA	NA	NA	NA	NA	19p13.2	NA	Name=Max	NA	NA	rs28657412	0.6	0.6	0.585	0.575479	0.5586	0.3333	0.6455	0.8964	0.3589	0.57	0.37	0.64	0.87	0.5534	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.481189	NA	NA	0.520465	0.842941	NA	0.601	NA	3.367535
1315	7	156754981	156754981	T	C	intronic	NOM1	NA	NA	NA	intronic	ENSG00000146909	NA	NA	NA	NA	NA	7q36.3	NA	NA	NA	NA	rs3750131	0.25	0.25	0.26	0.264776	0.2038	0.2877	0.2795	0.2738	0.2812	0.22	0.29	0.25	0.25	0.231	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.065086	NA	NA	0.197791	0.266682	NA	0.167	NA	3.367409
1315	3	42362817	42362817	T	C	intergenic	CCK,LYZL4	dist=55155;dist=75758	NA	NA	ncRNA_exonic	ENSG00000231280	NA	NA	NA	NA	NA	3p22.1	NA	NA	NA	NA	rs678574	0.51	0.51	0.455	0.464058	0.6332	0.501	0.5965	0.2428	0.4571	0.62	0.47	0.62	0.29	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.725885	NA	NA	NA	NA	NA	0.558	NA	3.3668
1315	4	143324036	143324036	T	C	intronic	INPP4B	NA	NA	NA	intronic	ENSG00000109452	NA	NA	NA	NA	NA	4q31.21	NA	NA	NA	NA	rs1982965	0.56	0.56	0.524	0.546126	0.6332	0.7034	0.5346	0.1619	0.8221	0.67	0.73	0.54	0.18	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.548573	NA	NA	NA	NA	NA	0.522	NA	3.3668
1315	9	130198342	130198342	G	A	intronic	ZNF79	NA	NA	NA	intronic	ENSG00000196152	NA	NA	NA	NA	NA	9q33.3	NA	NA	NA	NA	rs4500179	0.57	0.57	0.565	0.557708	0.6332	0.4127	0.6499	0.6074	0.4969	0.64	0.41	0.61	0.61	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.098327	NA	NA	NA	NA	NA	0.471	NA	3.3668
1315	21	45053011	45053011	A	G	intronic	HSF2BP	NA	NA	NA	intronic	ENSG00000160207	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs7277539	0.71	0.71	0.719	0.72504	0.6332	0.8056	0.7349	0.7496	0.6963	0.63	0.79	0.71	0.76	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.240262	NA	NA	NA	NA	NA	0.681	NA	3.3668
1315	17	6704273	6704273	G	A	intronic	TEKT1	NA	NA	NA	intronic	ENSG00000167858	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs2136282	0.24	0.24	0.203	0.236821	0.2068	0.4157	0.281	0.0847	0.2577	0.2	0.44	0.23	0.07	0.2299	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.602132	3.602132	NA	0.196744	0.10168	NA	0.232	NA	3.366556
1315	1	1636274	1636274	C	T	intronic	CDK11A,CDK11B	NA	NA	NA	ncRNA_intronic	ENSG00000268575	NA	NA	NA	NA	NA	1p36.33	NA	NA	NA	NA	rs2179381	0.33	0.33	0.248	0.296725	0.5209	0.249	0.4251	0.0688	0.3323	0.51	0.25	0.41	0.07	0.446	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.386443	NA	NA	NA	NA	NA	0.145	NA	3.3664333
1315	22	50303515	50303515	A	C	intronic	ALG12	NA	NA	NA	intronic	ENSG00000182858	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs9616367	0.22	0.22	0.234	0.265375	0.2038	0.1081	0.1369	0.4054	0.3926	0.21	0.12	0.15	0.42	0.2246	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.385661	NA	NA	0.205349	0.350885	ID=COSN166789;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.341	NA	3.366251
1315	9	130198100	130198100	A	G	intronic	ZNF79	NA	NA	NA	intronic	ENSG00000196152	NA	NA	NA	NA	NA	9q33.3	NA	NA	NA	NA	rs7853047	0.57	0.57	0.567	0.557508	0.6342	0.4107	0.6499	0.6074	0.4969	0.64	0.41	0.61	0.61	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.870005	NA	NA	NA	NA	NA	0.471	NA	3.3658
1315	12	10602077	10602077	C	T	intronic	KLRC1	NA	NA	NA	intronic	ENSG00000134545	NA	NA	NA	NA	NA	12p13.2	NA	NA	NA	NA	rs2734440	0.53	0.53	0.504	0.49401	0.6342	0.5942	0.5908	0.205	0.5685	0.63	0.64	0.57	0.23	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.897	NA	NA	NA	NA	NA	0.478	NA	3.3658
1315	17	61783908	61783908	A	G	intronic	STRADA	NA	NA	NA	intronic	ENSG00000125695,ENSG00000266173	NA	NA	NA	NA	NA	17q23.3	NA	NA	NA	NA	rs3817182	0.68	0.68	NA	0.716853	0.6342	0.5665	0.7003	0.8669	0.7658	0.63	0.59	0.65	0.88	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.371498	NA	NA	NA	NA	NA	0.739	NA	3.3658
1315	19	43454562	43454562	G	T	intergenic	PSG7,PSG11	dist=13232;dist=57247	NA	NA	upstream	ENSG00000227349	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs115587530	0.1	0.1	0.076	0.0914537	0.1342	0.003	0.2089	0.0484	0.1135	0.14	0.0017	0.2	0.07	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.609381	NA	NA	NA	NA	NA	0.159	NA	3.3658
1315	4	86643155	86643155	A	C	intronic	ARHGAP24	NA	NA	NA	intronic	ENSG00000138639	NA	NA	NA	NA	NA	4q21.23	NA	NA	NA	NA	rs17010697	0.29	0.29	0.28	0.286741	0.2167	0.3323	0.3069	0.298	0.2822	0.22	0.37	0.28	0.3	0.2478	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.802654	NA	NA	0.169767	0.270086	NA	0.283	NA	3.365733
1315	13	25052420	25052420	T	A	intronic	PARP4	NA	NA	NA	ncRNA_intronic	ENSG00000243008	NA	NA	NA	NA	NA	13q12.12	NA	NA	NA	NA	rs17080653	0.29	0.29	0.237	0.302316	0.3181	0.2698	0.4107	0.1301	0.4755	0.31	0.31	0.41	0.15	0.327	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.518163	NA	NA	0.322907	0.142306	NA	0.246	NA	3.3653263
1315	20	3731622	3731622	C	T	intronic	HSPA12B	NA	NA	NA	intronic	ENSG00000132622	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs2474437	0.38	0.38	0.353	0.403155	0.3201	0.4554	0.389	0.4425	0.3916	0.32	0.42	0.36	0.44	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.480403	NA	NA	0.314896	0.431358	NA	0.413	NA	3.365004
1316	8	80965739	80965739	C	T	intronic	TPD52	NA	NA	NA	intronic	ENSG00000076554	NA	NA	NA	NA	NA	8q21.13	NA	NA	NA	NA	rs2303446	0.56	0.56	0.548	0.554513	0.6352	0.6865	0.4986	0.3782	0.6135	0.63	0.66	0.52	0.38	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.416267	NA	NA	NA	NA	NA	0.529	NA	3.3648
1316	10	118364842	118364842	A	G	intronic	PNLIPRP1	NA	NA	NA	intronic	ENSG00000187021	NA	NA	NA	NA	NA	10q25.3	NA	NA	NA	NA	rs2915753	0.58	0.58	0.563	0.580871	0.6352	0.4881	0.7061	0.5272	0.6043	0.63	0.47	0.69	0.53	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.286784	NA	NA	NA	NA	NA	0.659	NA	3.3648
1316	12	94984896	94984896	C	T	intronic	TMCC3	NA	NA	NA	intronic	ENSG00000057704	NA	NA	NA	NA	NA	12q22	NA	NA	NA	NA	rs7975236	0.62	0.62	0.612	0.611422	0.6352	0.5466	0.67	0.6278	0.59	0.64	0.56	0.68	0.63	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.894195	NA	NA	NA	NA	NA	0.572	NA	3.3648
1316	12	94984900	94984900	A	C	intronic	TMCC3	NA	NA	NA	intronic	ENSG00000057704	NA	NA	NA	NA	NA	12q22	NA	NA	NA	NA	rs7975133	0.62	0.62	0.609	0.611422	0.6352	0.5466	0.67	0.6278	0.59	0.64	0.56	0.68	0.63	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.81133	NA	NA	NA	NA	NA	0.572	NA	3.3648
1316	12	94984929	94984929	C	G	intronic	TMCC3	NA	NA	NA	intronic	ENSG00000057704	NA	NA	NA	NA	NA	12q22	NA	NA	NA	NA	rs11107615	0.62	0.62	0.619	0.611022	0.6352	0.5466	0.67	0.6256	0.591	0.64	0.56	0.68	0.63	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.54251	NA	NA	NA	NA	NA	0.572	NA	3.3648
1316	13	101890040	101890040	A	G	intronic	NALCN	NA	NA	NA	intronic	ENSG00000102452	NA	NA	NA	NA	NA	13q33.1	NA	NA	NA	NA	rs9518352	0.73	0.73	0.689	0.692093	0.6352	0.9355	0.7637	0.5673	0.6176	0.66	0.96	0.74	0.56	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.357793	NA	NA	NA	NA	NA	0.493	NA	3.3648
1316	11	6816778	6816778	A	G	exonic	OR6A2	NA	synonymous SNV	OR6A2:NM_003696:exon1:c.T162C:p.S54S	exonic	ENSG00000184933	NA	synonymous SNV	ENSG00000184933:ENST00000332601:exon1:c.T162C:p.S54S	NA	NA	11p15.4	NA	NA	NA	NA	rs866347	0.7	0.7	0.704	0.694289	0.8032	0.8224	0.5922	0.4781	0.8149	0.81	0.82	0.63	0.47	0.7306	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.004951	NA	NA	0.768622	0.521808	ID=COSM1179746;OCCURENCE=1(prostate)	0.645	NA	3.3642446
1316	15	34133130	34133130	A	G	intronic	RYR3	NA	NA	NA	intronic	ENSG00000198838	NA	NA	NA	NA	NA	15q14	NA	Name=MafK_(ab50322),MafF_(M8194)	NA	NA	rs3764232	0.54	0.54	0.546	0.607228	0.5219	0.369	0.6153	0.7935	0.683	0.5	0.36	0.58	0.77	0.5707	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.926068	NA	NA	0.54342	0.743174	NA	0.616	NA	3.36398
1316	3	111793316	111793316	G	T	intronic	TMPRSS7	NA	NA	NA	intronic	ENSG00000176040	NA	NA	NA	NA	NA	3q13.2	NA	NA	NA	NA	rs191454	0.62	0.62	0.598	0.601438	0.6362	0.6022	0.6268	0.5923	0.5593	0.64	0.65	0.59	0.57	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.930893	NA	NA	NA	NA	NA	0.645	NA	3.3638
1316	4	99877402	99877402	T	G	intergenic	EIF4E,METAP1	dist=25616;dist=39386	NA	NA	ncRNA_exonic	ENSG00000214886	NA	NA	NA	NA	NA	4q23	NA	NA	NA	NA	rs1230148	0.79	0.79	0.81	0.810903	0.6362	0.875	0.7248	0.9811	0.7556	0.63	0.9	0.7	0.98	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.509311	NA	1	NA	NA	NA	0.862	NA	3.3638
1316	14	25736453	25736453	G	A	intergenic	STXBP6,NOVA1	dist=217358;dist=1178636	NA	NA	ncRNA_exonic	ENSG00000257179	NA	NA	NA	NA	NA	14q12	NA	NA	NA	NA	rs1888368	0.73	0.73	0.697	0.735623	0.6362	0.7887	0.5692	0.8646	0.727	0.63	0.81	0.6	0.87	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.046747	NA	NA	NA	NA	NA	0.783	NA	3.3638
1316	15	42437711	42437711	T	C	intronic	PLA2G4F	NA	NA	NA	intronic	ENSG00000168907	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs621560	0.47	0.47	0.461	0.414137	0.6362	0.2103	0.4164	0.4796	0.3057	0.64	0.23	0.46	0.49	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.313944	NA	NA	NA	NA	NA	0.543	NA	3.3638
1316	17	11827353	11827353	T	C	intronic	DNAH9	NA	NA	NA	intronic	ENSG00000007174	NA	NA	NA	NA	NA	17p12	NA	NA	NA	NA	rs2286300	0.63	0.63	0.605	0.643371	0.6362	0.6825	0.7219	0.5575	0.6708	0.64	0.67	0.73	0.52	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.404068	NA	NA	NA	NA	NA	0.623	NA	3.3638
1316	19	7692058	7692058	G	A	intronic	XAB2	NA	NA	NA	intronic	ENSG00000076924	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs794084	0.53	0.53	0.507	0.515176	0.6362	0.3472	0.5793	0.5673	0.4479	0.63	0.34	0.55	0.56	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.022141	NA	NA	NA	NA	NA	0.63	NA	3.3638
1316	19	8994285	8994285	T	A	intronic	MUC16	NA	NA	NA	intronic	ENSG00000181143	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs752410	0.52	0.52	0.503	0.464257	0.6362	0.4593	0.5533	0.3177	0.4274	0.62	0.53	0.59	0.32	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.371753	NA	NA	NA	NA	NA	0.493	NA	3.3638
1316	19	44055898	44055898	C	T	intronic	XRCC1	NA	NA	NA	intronic	ENSG00000073050	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs25486	0.72	0.72	0.723	0.717053	0.6362	0.7569	0.6772	0.8147	0.6554	0.65	0.74	0.68	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.335573	NA	NA	NA	NA	NA	0.732	NA	3.3638
1316	12	9020912	9020912	A	G	exonic	A2ML1	NA	synonymous SNV	A2ML1:NM_144670:exon31:c.A4020G:p.Q1340Q	exonic	ENSG00000166535	NA	synonymous SNV	ENSG00000166535:ENST00000539547:exon20:c.A2547G:p.Q849Q,ENSG00000166535:ENST00000541459:exon20:c.A2670G:p.Q890Q,ENSG00000166535:ENST00000299698:exon31:c.A4020G:p.Q1340Q	NA	NA	12p13.31	NA	NA	NA	NA	rs1476910	0.67	0.67	0.711	0.677716	0.7734	0.5427	0.6758	0.6301	0.7843	0.78	0.54	0.71	0.63	0.7352	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.465231	NA	NA	0.794366	0.644972	ID=COSM1364799;OCCURENCE=1(large_intestine)	0.812	NA	3.3637006
1316	7	5334582	5334582	C	T	intronic	SLC29A4	NA	NA	NA	intronic	ENSG00000164638	NA	NA	NA	NA	NA	7p22.1	NA	NA	NA	NA	rs59119551	0.25	0.25	0.213	0.302117	0.2008	0.5109	0.2305	0.0908	0.5276	0.2	0.5	0.2	0.08	0.2654	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.770983	1.770983	NA	0.170893	0.097866	NA	0.21	NA	3.362907
1316	22	17385626	17385626	C	G	intergenic	HSFY1P1,GAB4	dist=75401;dist=57201	NA	NA	upstream	ENSG00000230481	NA	NA	NA	NA	NA	22q11.1	NA	NA	NA	NA	rs71326282	0.06	0.06	NA	NA	NA	NA	NA	NA	NA	0.06	0.05	0.11	0.02	0.1371	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.654433	NA	NA	NA	NA	NA	NA	NA	3.3629
1316	3	53883910	53883910	C	T	intronic	IL17RB	NA	NA	NA	intronic	ENSG00000056736	NA	NA	NA	NA	NA	3p21.1	NA	NA	NA	NA	rs4687751	0.53	0.53	0.548	0.51238	0.6372	0.4712	0.4928	0.3722	0.6299	0.63	0.51	0.53	0.41	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.203131	NA	NA	NA	NA	NA	0.5	NA	3.3628
1316	4	1089740	1089740	C	T	intronic	RNF212	NA	NA	NA	intronic	ENSG00000178222	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs57096673	NA	NA	NA	0.677117	0.6372	0.6121	0.5648	0.8487	0.6329	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.737455	NA	NA	NA	NA	NA	NA	NA	3.3628
1316	7	158512836	158512836	T	C	intergenic	NCAPG2,ESYT2	dist=15316;dist=10853	NA	NA	ncRNA_exonic	ENSG00000228030	NA	NA	NA	NA	NA	7q36.3	NA	NA	NA	NA	rs35478545	0.51	0.51	0.486	0.477037	0.6372	0.3661	0.6167	0.3245	0.5337	0.65	0.41	0.6	0.33	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.171204	NA	NA	NA	NA	NA	0.594	NA	3.3628
1316	14	36334030	36334030	G	C	intronic	BRMS1L	NA	NA	NA	intronic	ENSG00000100916	NA	NA	NA	NA	NA	14q13.2	NA	NA	NA	NA	rs12890607	0.33	0.33	0.272	0.28115	0.6372	0.1637	0.3991	0.0272	0.2955	0.64	0.14	0.42	0.04	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.064829	NA	NA	NA	NA	NA	0.391	NA	3.3628
1316	17	2196088	2196088	C	T	intronic	SMG6	NA	NA	NA	intronic	ENSG00000070366	NA	NA	NA	NA	NA	17p13.3	NA	NA	NA	NA	rs216206	0.6	0.6	0.577	0.574481	0.6372	0.7629	0.6412	0.3139	0.6207	0.63	0.78	0.64	0.33	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.703518	NA	NA	NA	NA	NA	0.543	NA	3.3628
1316	20	49196167	49196167	T	C	intronic	PTPN1	NA	NA	NA	intronic	ENSG00000196396	NA	NA	NA	NA	NA	20q13.13	NA	NA	NA	NA	rs2282147	0.64	0.64	0.631	0.625599	0.6372	0.6855	0.6138	0.559	0.6503	0.64	0.71	0.62	0.59	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.600048	NA	NA	NA	NA	NA	0.703	NA	3.3628
1316	18	214959	214959	A	G	intronic	THOC1	NA	NA	NA	intronic	ENSG00000079134	NA	NA	NA	NA	NA	18p11.32	NA	NA	NA	NA	rs489947	0.15	0.15	0.156	0.172324	0.2147	0.006	0.1455	0.2262	0.2464	0.21	0.0017	0.16	0.22	0.1924	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.985669	NA	NA	0.230211	0.220653	NA	0.08	NA	3.362689
1316	19	11411868	11411868	C	A	intronic	TSPAN16	NA	NA	NA	ncRNA_exonic	ENSG00000267174	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs420703	0.43	0.43	0.445	0.456869	0.2962	0.2788	0.3818	0.8449	0.3344	0.3	0.26	0.4	0.83	0.3637	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.298155	NA	NA	0.310814	0.766909	NA	0.565	NA	3.3626193
1316	1	43773033	43773033	A	G	intronic	TIE1	NA	NA	NA	intronic	ENSG00000066056	NA	NA	NA	NA	NA	1p34.2	NA	NA	NA	NA	rs2275180	0.75	0.75	0.749	0.80651	0.6382	0.87	0.6542	0.8986	0.8978	0.63	0.87	0.64	0.88	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.100038	NA	NA	NA	NA	NA	0.674	NA	3.3618
1316	9	140289696	140289696	A	C	intronic	EXD3	NA	NA	NA	intronic	ENSG00000187609	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs9695232	0.6	0.6	0.581	0.604433	0.6382	0.3621	0.4957	0.9644	0.41	0.61	0.35	0.52	0.95	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.591632	NA	NA	NA	NA	NA	0.558	NA	3.3618
1316	22	39551989	39551989	G	A	intergenic	CBX7,PDGFB	dist=3451;dist=67696	NA	NA	downstream	ENSG00000227009	NA	NA	NA	NA	NA	22q13.1	NA	NA	NA	NA	rs12169390	0.3	0.3	0.273	0.292133	0.1382	0.4395	0.4049	0.357	0.1309	0.14	0.42	0.36	0.36	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.862979	1.862979	NA	NA	NA	NA	0.261	NA	3.3618
1316	1	240975213	240975213	T	C	intronic	RGS7	NA	NA	NA	intronic	ENSG00000182901	NA	NA	NA	Score=676;Name=lod=745	NA	1q43	NA	NA	NA	NA	rs2275742	0.43	0.43	0.428	0.404553	0.5557	0.4683	0.428	0.2148	0.4233	0.57	0.44	0.45	0.22	0.506	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.809015	NA	NA	0.576646	0.272356	ID=COSM146839;OCCURENCE=1(stomach)	0.471	NA	3.361654
1316	12	83525962	83525962	T	C	intronic	TMTC2	NA	NA	NA	intronic	ENSG00000179104	NA	NA	NA	NA	NA	12q21.31	NA	NA	NA	NA	rs7970515	0.27	0.27	0.257	0.266573	0.2137	0.3284	0.3213	0.3139	0.1544	0.21	0.32	0.3	0.3	0.2261	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.543876	NA	NA	0.198605	0.29369	NA	0.239	NA	3.361595
1316	2	231328728	231328728	C	T	intronic	SP100	NA	NA	NA	intronic	ENSG00000067066	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs2306276	0.19	0.19	0.19	0.194289	0.3221	0.0635	0.1772	0.1203	0.3098	0.31	0.06	0.2	0.15	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.405399	2.405399	NA	0.316782	0.148844	NA	0.138	NA	3.361118
1316	13	103289409	103289409	A	G	intronic	TPP2	NA	NA	NA	intronic	ENSG00000134900	NA	NA	NA	NA	NA	13q33.1	NA	NA	NA	NA	rs9518799	0.14	0.14	0.121	0.139776	0.2058	0.1032	0.183	0.0182	0.2434	0.22	0.11	0.19	0.02	0.2118	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.1348	NA	NA	0.221395	0.049251	ID=COSN164545;OCCURENCE=1(NS)	0.101	NA	3.361005
1316	10	27412669	27412669	A	T	intronic	YME1L1	NA	NA	NA	intronic	ENSG00000136758	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs2274743	0.34	0.34	0.269	0.340056	0.2247	0.5308	0.1844	0.3011	0.4254	0.23	0.6	0.19	0.3	0.2527	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.84362	NA	NA	0.161614	0.268736	NA	0.239	NA	3.360986
1316	1	1562437	1562437	C	G	intronic	MIB2	NA	NA	NA	UTR3	ENSG00000197530	ENST00000506488:c.*2C>G	NA	NA	NA	NA	1p36.33	NA	NA	NA	NA	rs28510084	0.37	0.37	0.352	0.440495	0.2336	0.3145	0.4193	0.6838	0.4693	0.23	0.32	0.33	0.7	0.3586	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.697949	NA	NA	0.213494	0.594258	NA	0.123	NA	3.3609727
1316	15	97094597	97094597	C	T	intergenic	NR2F2,SPATA8	dist=211105;dist=232082	NA	NA	upstream	ENSG00000259340	NA	NA	NA	NA	NA	15q26.2	NA	NA	NA	NA	rs28736481	0.14	0.14	0.134	0.145567	0.1392	0.0853	0.098	0.2436	0.1155	0.13	0.09	0.12	0.23	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.577393	NA	NA	NA	NA	NA	0.152	NA	3.3608
1316	16	4787987	4787987	G	A	intronic	C16orf71	NA	NA	NA	exonic	ENSG00000166246	NA	nonsynonymous SNV	ENSG00000166246:ENST00000590191:exon3:c.G316A:p.D106N	NA	NA	16p13.3	NA	NA	NA	NA	rs859310	0.58	0.58	0.581	0.528155	0.6034	0.6806	0.5447	0.3775	0.4857	0.6	0.71	0.54	0.41	0.5884	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.980675	NA	NA	0.61407	0.444015	NA	0.514	NA	3.3607967
1316	1	34008297	34008297	A	G	intronic	CSMD2	NA	NA	NA	intronic	ENSG00000121904	NA	NA	NA	NA	NA	1p35.1	NA	NA	NA	NA	rs1000418	0.23	0.23	0.219	0.238618	0.1958	0.3423	0.245	0.1354	0.3108	0.2	0.32	0.2	0.18	0.2343	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.812312	NA	NA	0.209186	0.164775	NA	0.116	NA	3.360714
1316	5	41842746	41842746	T	C	intronic	OXCT1	NA	NA	NA	intronic	ENSG00000083720	NA	NA	NA	NA	NA	5p13.1	NA	NA	NA	NA	rs13164201	0.14	0.14	0.109	0.133387	0.2505	NA	0.1643	0.1188	0.1483	0.24	NA	0.18	0.11	0.1823	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.506922	NA	NA	0.206744	0.141625	NA	0.188	NA	3.360456
1316	18	33048554	33048554	C	T	UTR3	INO80C	NM_001098817:c.*21G>A,NM_194281:c.*21G>A	NA	NA	UTR3	ENSG00000153391	ENST00000334598:c.*21G>A,ENST00000590757:c.*21G>A,ENST00000441607:c.*21G>A,ENST00000586489:c.*21G>A	NA	NA	NA	NA	18q12.2	NA	NA	NA	NA	rs3088182	0.25	0.25	0.223	0.23742	0.332	0.1369	0.3761	0.2171	0.1728	0.33	0.13	0.35	0.21	0.3062	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.226595	NA	NA	0.335	0.218793	NA	0.261	NA	3.3601334
1316	1	227192579	227192579	A	C	intronic	CDC42BPA	NA	NA	NA	UTR3	ENSG00000143776	ENST00000429440:c.*39T>G	NA	NA	NA	NA	1q42.13	NA	NA	NA	NA	rs2297418	0.3	0.3	0.303	0.267572	0.4433	0.1567	0.2824	0.267	0.1912	0.44	0.15	0.3	0.25	0.3633	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.417491	NA	NA	NA	NA	NA	0.377	NA	3.3600667
1316	5	35955682	35955682	C	G	intronic	UGT3A1	NA	NA	NA	UTR3	ENSG00000145626	ENST00000515801:c.*2331G>C,ENST00000503189:c.*49G>C,ENST00000507113:c.*49G>C	NA	NA	NA	NA	5p13.2	NA	NA	NA	NA	rs768622	0.35	0.35	0.329	0.344249	0.4175	0.1181	0.3343	0.4803	0.3252	0.42	0.12	0.37	0.47	0.3891	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.584822	NA	NA	NA	NA	NA	0.486	NA	3.3600667
1316	12	6635374	6635374	G	A	intronic	NCAPD2	NA	NA	NA	intronic	ENSG00000010292	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs10849483	0.11	0.11	0.09	0.107827	0.2107	0.0089	0.1354	0.0242	0.1973	0.21	0.01	0.18	0.04	0.1932	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.136154	NA	NA	0.236047	0.056514	NA	0.087	NA	3.360053
1316	7	142099968	142099968	C	T	intergenic	LOC730441,MTRNR2L6	dist=127900;dist=274163	NA	NA	UTR5	ENSG00000229200	ENST00000390359:c.-30G>A	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs361367	0.2	0.2	0.168	0.238419	0.1461	0.0407	0.1873	0.4652	0.2669	0.13	0.06	0.21	0.46	0.1764	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.713307	NA	NA	0.151005	0.393805	NA	0.319	NA	3.3598284
1316	14	74989433	74989433	T	C	intronic	LTBP2	NA	NA	NA	intronic	ENSG00000119681	NA	NA	NA	NA	NA	14q24.3	NA	NA	NA	NA	rs699371	0.72	0.72	0.726	0.736422	0.6402	0.7827	0.6715	0.8306	0.7065	0.63	0.82	0.65	0.8	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.610337	NA	NA	NA	NA	NA	0.754	NA	3.3598
1316	6	33650430	33650430	G	C	intronic	ITPR3	NA	NA	NA	intronic	ENSG00000096433	NA	NA	NA	NA	NA	6p21.31	NA	NA	NA	NA	rs2296331	0.2	0.2	0.225	0.195487	0.2237	0.0685	0.2061	0.3154	0.1278	0.22	0.08	0.19	0.32	0.1981	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.153601	3.153601	NA	0.218459	0.264652	NA	0.167	NA	3.359741
1316	5	172324128	172324128	A	T	intronic	ERGIC1	NA	NA	NA	intronic	ENSG00000113719	NA	NA	NA	NA	NA	5q35.1	NA	NA	NA	NA	rs13154777	0.26	0.26	0.262	0.257987	0.2167	0.2649	0.2017	0.3495	0.2096	0.23	0.25	0.21	0.34	0.2242	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.277236	NA	NA	0.199535	0.326827	NA	0.283	NA	3.359565
1316	8	133150103	133150103	C	T	intronic	KCNQ3	NA	NA	NA	intronic	ENSG00000184156	NA	NA	NA	NA	NA	8q24.22	NA	NA	NA	NA	rs2469515	0.12	0.12	0.122	0.110423	0.2396	0.0119	0.1527	0.0567	0.1217	0.23	0.01	0.17	0.05	0.1698	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.717822	NA	NA	0.231163	0.080345	NA	0.196	NA	3.359437
1316	9	136205775	136205775	T	C	intergenic	SURF6,MED22	dist=2728;dist=1980	NA	NA	UTR3	ENSG00000148297	ENST00000491289:c.*2580A>G	NA	NA	NA	NA	9q34.2	NA	NA	NA	NA	rs590858	0.53	0.53	0.54	0.513379	0.4742	0.6845	0.5288	0.4115	0.5041	0.47	0.71	0.54	0.42	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.075521	NA	NA	NA	NA	NA	0.58	NA	3.3591334
1316	20	33592248	33592248	C	T	intronic	TRPC4AP	NA	NA	NA	intronic	ENSG00000100991	NA	NA	NA	NA	NA	20q11.22	NA	NA	NA	NA	rs752448	0.17	0.17	0.185	0.174321	0.1938	0.1071	0.134	0.1657	0.2638	0.2	0.12	0.16	0.17	0.2488	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.697029	NA	NA	0.198372	0.181117	NA	0.275	NA	3.359028
1316	1	228437603	228437603	T	C	intronic	OBSCN	NA	NA	NA	intronic	ENSG00000154358	NA	NA	NA	NA	NA	1q42.13	NA	NA	NA	NA	rs6426494	0.67	0.67	0.638	0.663738	0.6412	0.6151	0.6873	0.854	0.4632	0.63	0.6	0.68	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.736248	NA	NA	NA	NA	NA	0.674	NA	3.3588
1316	7	4214046	4214046	T	C	intronic	SDK1	NA	NA	NA	intronic	ENSG00000146555	NA	NA	NA	NA	NA	7p22.2	NA	NA	NA	NA	rs600537	0.66	0.66	0.617	0.648962	0.6412	0.7649	0.6902	0.5257	0.6748	0.65	0.76	0.69	0.53	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.003397	NA	NA	NA	NA	NA	0.623	NA	3.3588
1316	12	108086896	108086896	A	C	intronic	PWP1	NA	NA	NA	intronic	ENSG00000136045	NA	NA	NA	NA	NA	12q23.3	NA	NA	NA	NA	rs2287215	0.27	0.27	0.234	0.230831	0.1928	0.498	0.2911	0.0159	0.2423	0.2	0.56	0.25	0.03	0.2464	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.335486	NA	NA	0.202093	0.044258	NA	0.181	NA	3.358707
1316	22	19486600	19486600	C	T	intronic	CDC45	NA	NA	NA	intronic	ENSG00000093009	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs9618586	0.39	0.39	0.399	0.402356	0.171	0.4365	0.3069	0.6936	0.2791	0.18	0.46	0.28	0.71	0.2723	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.883767	NA	NA	0.198023	0.625284	NA	0.348	NA	3.358677
1316	12	109671738	109671738	C	A	intronic	ACACB	NA	NA	NA	intronic	ENSG00000076555	NA	NA	NA	NA	NA	12q24.11	NA	NA	NA	NA	rs34708647	0.17	0.17	0.173	0.145168	0.2366	0.0109	0.147	0.2179	0.09	0.25	0.01	0.16	0.24	0.1844	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.586008	1.586008	NA	0.221047	0.194961	NA	0.203	NA	3.357953
1316	1	228434602	228434602	A	T	intronic	OBSCN	NA	NA	NA	intronic	ENSG00000154358	NA	NA	NA	NA	NA	1q42.13	NA	NA	NA	NA	rs1411915	0.67	0.67	0.656	0.664137	0.6421	0.6151	0.6888	0.854	0.4632	0.63	0.6	0.69	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.817022	NA	NA	NA	NA	NA	0.674	NA	3.3579
1316	5	101811346	101811346	T	C	intronic	SLCO6A1	NA	NA	NA	intronic	ENSG00000205359	NA	NA	NA	NA	NA	5q21.1	NA	NA	NA	NA	rs4703232	0.59	0.59	0.573	0.579872	0.6421	0.4613	0.5317	0.6566	0.5685	0.64	0.5	0.57	0.64	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.200352	NA	NA	NA	NA	NA	0.558	NA	3.3579
1316	6	31246542	31246542	G	T	intergenic	HLA-C,HLA-B	dist=6629;dist=75107	NA	NA	downstream	ENSG00000214892	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs113475966	0.15	0.15	0.12	0.168331	0.1421	0.0694	0.1974	0.2428	0.1759	0.13	0.1	0.2	0.21	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.756921	NA	NA	NA	NA	NA	0.08	NA	3.3579
1316	8	25287556	25287556	A	G	intronic	KCTD9	NA	NA	NA	intronic	ENSG00000104756	NA	NA	NA	NA	NA	8p21.2	NA	NA	NA	NA	rs965130	0.55	0.55	0.508	0.525359	0.6421	0.6409	0.634	0.2625	0.5644	0.65	0.63	0.61	0.25	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.724613	NA	NA	NA	NA	NA	0.63	NA	3.3579
1316	10	70945840	70945840	C	T	intronic	SUPV3L1	NA	NA	NA	intronic	ENSG00000156502	NA	NA	NA	NA	NA	10q22.1	NA	NA	NA	NA	rs5030910	0.13	0.13	0.11	0.117412	0.2525	0.0367	0.1095	0.0946	0.0982	0.25	0.02	0.13	0.07	0.1776	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.616494	NA	NA	0.212209	0.105311	NA	0.196	NA	3.357691
1316	1	16096893	16096893	C	T	intronic	FBLIM1	NA	NA	NA	intronic	ENSG00000162458	NA	NA	NA	NA	NA	1p36.21	NA	NA	NA	NA	rs12146078	0.14	0.14	0.123	0.193291	0.1968	0.0784	0.2161	0.0976	0.4213	0.19	0.09	0.17	0.1	0.2234	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.389409	NA	NA	0.222791	0.102587	NA	0.261	NA	3.357009
1316	8	28645271	28645271	C	T	intronic	INTS9	NA	NA	NA	intronic	ENSG00000104299	NA	NA	NA	NA	NA	8p21.1	NA	NA	NA	NA	rs241187	0.44	0.44	0.404	0.383786	0.6431	0.1756	0.5548	0.2564	0.3824	0.64	0.19	0.6	0.32	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.025773	NA	NA	NA	NA	NA	0.341	NA	3.3569
1316	22	44514809	44514809	C	T	intronic	PARVB	NA	NA	NA	intronic	ENSG00000188677	NA	NA	NA	NA	NA	22q13.31	NA	NA	NA	NA	rs5764541	0.74	0.74	0.759	0.750998	0.6431	0.7768	0.634	0.9539	0.6442	0.64	0.75	0.64	0.95	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.357933	NA	NA	NA	NA	NA	0.797	NA	3.3569
1316	1	11141187	11141187	C	G	exonic	EXOSC10	NA	synonymous SNV	EXOSC10:NM_001001998:exon11:c.G1389C:p.P463P,EXOSC10:NM_002685:exon11:c.G1389C:p.P463P	exonic	ENSG00000171824	NA	synonymous SNV	ENSG00000171824:ENST00000304457:exon11:c.G1389C:p.P463P,ENSG00000171824:ENST00000376936:exon11:c.G1389C:p.P463P,ENSG00000171824:ENST00000544779:exon11:c.G1389C:p.P463P	NA	NA	1p36.22	NA	NA	NA	NA	rs2258621	0.71	0.71	0.754	0.772364	0.7694	0.9405	0.8415	0.5378	0.8701	0.71	0.87	0.79	0.48	0.779	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.321892	NA	NA	0.761395	0.55833	NA	0.783	NA	3.3568716
1316	5	96112083	96112083	T	G	UTR3	ERAP1	NM_001198541:c.*17A>C,NM_001040458:c.*17A>C	NA	NA	UTR3	ENSG00000164307	ENST00000443439:c.*17A>C	NA	NA	NA	NA	5q15	NA	NA	NA	NA	rs1065407	0.21	0.21	0.189	0.174121	0.3708	0.0694	0.2205	0.0787	0.1759	0.37	0.09	0.25	0.08	0.2631	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.706189	NA	NA	0.342674	0.137767	NA	0.174	NA	3.3567594
1316	3	130881409	130881409	T	C	intronic	NEK11	NA	NA	NA	intronic	ENSG00000114670	NA	NA	NA	NA	NA	3q22.1	NA	NA	Name=11	NA	rs1913898	0.37	0.37	0.35	0.358626	0.5696	0.2917	0.438	0.0825	0.5276	0.56	0.3	0.46	0.11	0.4988	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.238856	NA	NA	0.575	0.165229	NA	0.428	NA	3.3566
1316	2	230841074	230841074	C	T	intronic	FBXO36	NA	NA	NA	intronic	ENSG00000153832	NA	NA	NA	NA	NA	2q36.3	NA	NA	NA	NA	rs499449	0.26	0.26	0.269	0.283946	0.1809	0.4256	0.2046	0.2519	0.3436	0.18	0.42	0.19	0.23	0.2469	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.168183	2.168183	NA	0.215864	0.244893	NA	0.246	NA	3.356336
1316	6	24871021	24871021	C	A	intronic	FAM65B	NA	NA	NA	intronic	ENSG00000111913	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs2817748	0.31	0.31	0.264	0.329473	0.328	0.256	0.3098	0.3487	0.3947	0.34	0.27	0.3	0.33	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.041933	NA	NA	0.315839	0.343208	NA	0.275	NA	3.356161
1316	14	92084004	92084004	C	G	exonic	CATSPERB	NA	synonymous SNV	CATSPERB:NM_024764:exon20:c.G2337C:p.V779V	exonic	ENSG00000133962	NA	synonymous SNV	ENSG00000133962:ENST00000256343:exon20:c.G2337C:p.V779V	NA	NA	14q32.12	NA	NA	NA	NA	rs1620238	0.8	0.8	0.771	0.801118	0.7714	0.9752	0.8184	0.6309	0.8701	0.77	0.97	0.81	0.65	0.7916	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.353233	NA	NA	0.747558	0.645937	NA	0.732	NA	3.3561086
1316	1	169564130	169564130	T	G	intronic	SELP	NA	NA	NA	intronic	ENSG00000174175	NA	NA	NA	NA	NA	1q24.2	NA	NA	NA	NA	rs1569471	0.25	0.25	0.279	0.258187	0.2207	0.0129	0.1643	0.6679	0.0624	0.2	0.01	0.21	0.63	0.2014	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.270551	1.270551	NA	0.22186	0.57172	NA	0.333	NA	3.35604
1316	22	50278642	50278642	C	T	exonic	ZBED4	NA	synonymous SNV	ZBED4:NM_014838:exon2:c.C1332T:p.G444G	exonic	ENSG00000100426	NA	synonymous SNV	ENSG00000100426:ENST00000216268:exon2:c.C1332T:p.G444G	NA	NA	22q13.33	NA	NA	NA	NA	rs910800	0.66	0.66	0.605	0.60024	0.7922	0.8244	0.8213	0.174	0.591	0.79	0.81	0.8	0.17	0.7318	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.40594	NA	NA	0.786744	0.287789	NA	0.522	NA	3.3559226
1316	4	110786517	110786517	A	G	intronic	LRIT3	NA	NA	NA	intronic	ENSG00000183423	NA	NA	NA	NA	NA	4q25	NA	NA	NA	NA	rs7679303	0.58	0.58	0.605	0.559904	0.6441	0.6329	0.4135	0.5257	0.5481	0.64	0.63	0.47	0.52	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.458975	NA	NA	NA	NA	NA	0.5	NA	3.3559
1316	11	117375596	117375596	G	A	intronic	DSCAML1	NA	NA	NA	intronic	ENSG00000177103	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs2276343	0.2	0.2	0.172	0.209864	0.2127	0.2331	0.2089	0.1188	0.3067	0.2	0.26	0.19	0.12	0.2247	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.95704	NA	NA	0.206704	0.133576	NA	0.145	NA	3.355896
1316	19	58921296	58921296	A	G	intronic	ZNF584	NA	NA	NA	intronic	ENSG00000171574	NA	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs34511020	0.16	0.16	0.161	0.151757	0.2485	0.0546	0.1772	0.1225	0.1738	0.23	0.06	0.19	0.15	0.1872	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.191366	3.191366	NA	0.208488	0.117567	NA	0.181	NA	3.355812
1316	19	42603776	42603776	A	G	intronic	POU2F2	NA	NA	NA	intronic	ENSG00000028277	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs1205817	0.34	0.34	0.362	0.415335	0.172	0.1865	0.2536	0.8548	0.4223	0.17	0.17	0.28	0.82	0.2747	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.056826	NA	NA	0.197558	0.744666	NA	0.377	NA	3.355742
1316	8	27668726	27668726	C	T	intronic	PBK	NA	NA	NA	intronic	ENSG00000168078,ENSG00000171320	NA	NA	NA	NA	NA	8p21.1	NA	NA	NA	NA	rs17479454	0.21	0.21	0.213	0.186102	0.3529	0.0228	0.3055	0.1082	0.2035	0.35	0.03	0.31	0.13	0.2916	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.714796	NA	NA	NA	NA	NA	0.304	NA	3.3555
1316	10	70955056	70955056	A	G	intronic	SUPV3L1	NA	NA	NA	intronic	ENSG00000156502	NA	NA	NA	NA	NA	10q22.1	NA	NA	NA	NA	rs5018859	0.13	0.13	0.117	0.117412	0.2525	0.0367	0.1095	0.0946	0.0982	0.25	0.02	0.13	0.07	0.1798	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.418251	NA	NA	0.212259	0.105765	NA	0.196	NA	3.355441
1316	11	107925557	107925557	T	C	intronic	CUL5	NA	NA	NA	intronic	ENSG00000166266	NA	NA	NA	NA	NA	11q22.3	NA	NA	NA	NA	rs2271853	0.15	0.15	0.138	0.149561	0.2346	0.0565	0.1715	0.1589	0.1299	0.23	0.05	0.2	0.11	0.191	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.377017	2.377017	NA	0.218976	0.168333	NA	0.109	NA	3.355424
1316	10	70958327	70958327	C	T	intronic	SUPV3L1	NA	NA	NA	intronic	ENSG00000156502	NA	NA	NA	NA	NA	10q22.1	NA	NA	NA	NA	rs5030911	0.14	0.14	0.14	0.124201	0.2525	0.0367	0.1124	0.1188	0.0982	0.25	0.02	0.14	0.11	0.1799	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.129994	NA	NA	0.212326	0.127099	NA	0.225	NA	3.355274
1316	12	132262911	132262911	A	T	intronic	SFSWAP	NA	NA	NA	intronic	ENSG00000061936	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs75324057	0.12	0.12	0.099	0.0974441	0.2247	NA	0.2233	0.0061	0.1012	0.22	NA	0.26	0.01	0.1812	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.680104	NA	NA	0.238837	0.04335	NA	0.065	NA	3.355263
1316	1	203025209	203025209	G	C	intronic	PPFIA4	NA	NA	NA	intronic	ENSG00000143847	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs11590950	0.19	0.19	0.186	0.18151	0.2247	0.1052	0.1643	0.174	0.2382	0.23	0.11	0.18	0.22	0.2098	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.576715	NA	NA	0.210389	0.150363	NA	0.232	NA	3.355111
1317	1	55518528	55518528	C	A	intronic	PCSK9	NA	NA	NA	intronic	ENSG00000169174	NA	NA	NA	NA	NA	1p32.3	NA	NA	NA	NA	rs494198	0.66	0.66	0.645	0.629193	0.6451	0.8026	0.7695	0.4766	0.5409	0.63	0.79	0.73	0.51	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.072094	NA	NA	NA	NA	NA	0.572	NA	3.3549
1317	1	193205272	193205272	T	A	intronic	CDC73	NA	NA	NA	intronic	ENSG00000134371	NA	NA	NA	NA	NA	1q31.2	NA	NA	NA	NA	rs3738244	0.6	0.6	0.616	0.648363	0.6451	0.4484	0.647	0.6861	0.8078	0.64	0.44	0.66	0.69	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.826986	NA	NA	NA	NA	NA	0.572	NA	3.3549
1317	6	27424960	27424960	G	C	intronic	ZNF184	NA	NA	NA	intronic	ENSG00000096654	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs10484398	0.59	0.59	0.591	0.618211	0.6451	0.5774	0.6715	0.531	0.7127	0.64	0.55	0.65	0.51	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.371637	NA	NA	NA	NA	NA	0.58	NA	3.3549
1317	7	75613998	75613998	C	T	intronic	POR	NA	NA	NA	intronic	ENSG00000127948	NA	NA	NA	NA	NA	7q11.23	NA	NA	NA	NA	rs4732514	0.51	0.51	0.514	0.504792	0.6451	0.4583	0.6124	0.3654	0.5204	0.64	0.44	0.59	0.34	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.508019	NA	NA	NA	NA	NA	0.413	NA	3.3549
1317	17	67080770	67080770	A	G	intronic	ABCA6	NA	NA	NA	intronic	ENSG00000154262	NA	NA	NA	NA	NA	17q24.2	NA	NA	NA	NA	rs11657954	0.56	0.56	0.559	0.606629	0.6451	0.3194	0.6095	0.8003	0.5992	0.64	0.26	0.58	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.251639	NA	NA	NA	NA	NA	0.536	NA	3.3549
1317	20	20007325	20007325	T	G	intronic	NAA20	NA	NA	NA	intronic	ENSG00000173418	NA	NA	NA	NA	NA	20p11.23	NA	NA	NA	NA	rs200177	0.77	0.77	0.773	0.759185	0.6451	0.872	0.7824	0.8351	0.6411	0.66	0.86	0.77	0.82	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.436397	NA	NA	NA	NA	NA	0.732	NA	3.3549
1317	7	97922773	97922773	T	C	UTR3	BAIAP2L1	NM_018842:c.*60A>G	NA	NA	UTR3	ENSG00000006453	ENST00000005260:c.*60A>G	NA	NA	NA	NA	7q21.3	NA	NA	NA	NA	rs12873	0.35	0.35	0.329	0.28734	0.4801	0.2688	0.3516	0.2163	0.1585	0.48	0.24	0.38	0.24	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.587206	NA	NA	0.498429	0.261561	NA	0.261	NA	3.3548044
1317	19	51499116	51499116	A	G	downstream	KLK8	NA	NA	NA	ncRNA_intronic	ENSG00000267879	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs1654542	0.4	0.4	0.369	0.386382	0.4066	0.2391	0.4424	0.534	0.2781	0.41	0.26	0.45	0.49	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.112157	NA	NA	0.405405	0.544075	NA	0.493	NA	3.3546616
1317	7	101713567	101713567	T	C	intronic	CUX1	NA	NA	NA	intronic	ENSG00000257923	NA	NA	NA	NA	NA	7q22.1	NA	Name=CTCF	NA	NA	rs377587	0.87	0.87	0.873	0.879393	0.8241	0.9911	0.8559	0.8411	0.8896	0.82	0.99	0.83	0.82	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.017603	NA	NA	0.821329	0.83514	NA	0.899	NA	3.354571
1317	20	30385192	30385192	C	T	intronic	TPX2	NA	NA	NA	intronic	ENSG00000088325	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs6058463	0.23	0.23	0.228	0.223442	0.2326	NA	0.1599	0.5446	0.0552	0.24	NA	0.17	0.52	0.2025	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.106322	3.106322	NA	0.210698	0.463232	NA	0.217	NA	3.354202
1317	19	51499195	51499195	T	C	downstream	KLK8	NA	NA	NA	ncRNA_intronic	ENSG00000267879	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs1612902	0.4	0.4	0.374	0.386781	0.4066	0.2391	0.4438	0.5348	0.2781	0.41	0.26	0.45	0.49	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.274749	NA	NA	0.406034	0.544075	NA	0.493	NA	3.3540326
1317	9	35943177	35943177	G	A	intergenic	LOC158376,OR2S2	dist=31560;dist=13928	NA	NA	downstream	ENSG00000225639	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs72729427	0.07	0.07	0.058	0.0509185	0.1461	0.002	0.0749	0.0083	0.044	0.16	NA	0.09	0.01	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.078146	NA	NA	NA	NA	NA	0.036	NA	3.3539
1317	11	553866	553866	G	A	intronic	LRRC56	NA	NA	NA	intronic	ENSG00000161328	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs12792519	0.64	0.64	0.624	0.631789	0.6461	0.8264	0.621	0.4599	0.6564	0.66	0.81	0.57	0.45	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.017158	NA	NA	NA	NA	NA	0.58	NA	3.3539
1317	11	86736891	86736891	T	G	intergenic	LOC100506368,TMEM135	dist=24902;dist=11995	NA	NA	downstream	ENSG00000254748	NA	NA	NA	NA	NA	11q14.2	NA	NA	NA	NA	rs41376049	0.16	0.16	0.155	0.157348	0.1461	0.1468	0.1182	0.1921	0.1605	0.15	0.15	0.13	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.549733	1.549733	NA	NA	NA	NA	0.109	NA	3.3539
1317	17	8411812	8411812	C	T	intronic	MYH10	NA	NA	NA	intronic	ENSG00000133026	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs11658073	0.52	0.52	0.482	0.480631	0.6461	0.496	0.5389	0.2716	0.5358	0.64	0.51	0.6	0.27	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.539104	NA	NA	NA	NA	NA	0.486	NA	3.3539
1317	16	88766168	88766168	C	T	intronic	RNF166	NA	NA	NA	UTR5	ENSG00000158717	ENST00000568683:c.-43G>A	NA	NA	NA	NA	16q24.3	NA	NA	NA	NA	rs55780854	0.26	0.26	0.251	0.229633	0.2505	0.3611	0.2781	0.1876	0.0951	0.25	0.37	0.29	0.14	0.2787	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.24882	NA	NA	0.283985	0.182648	NA	0.159	NA	3.3534817
1317	11	7818518	7818518	C	T	upstream	OR5P2	NA	NA	NA	ncRNA_UTR5	ENSG00000183303	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs73406611	0.27	0.27	0.266	0.236621	0.2763	0.128	0.2911	0.348	0.1186	0.29	0.15	0.28	0.37	0.2605	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.223716	NA	NA	0.276598	0.31705	NA	0.254	NA	3.3532686
1317	22	23090438	23090438	A	G	intergenic	GGTLC2,MIR650	dist=100070;dist=74832	NA	NA	downstream	ENSG00000211665	NA	NA	NA	Score=393;Name=lod=53	NA	22q11.22	NA	NA	NA	NA	rs56223989	0.43	0.43	0.255	0.595647	0.6173	0.6399	0.6484	0.4758	0.6524	0.47	0.48	0.42	0.3	0.5297	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.493457	NA	NA	NA	NA	NA	0.449	NA	3.353
1317	12	9222286	9222286	C	T	intronic	A2M	NA	NA	NA	intronic	ENSG00000175899	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs1805664	0.24	0.24	0.215	0.213658	0.3161	0.0804	0.3804	0.1861	0.1646	0.33	0.07	0.38	0.19	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.878813	NA	NA	0.330924	0.189306	ID=COSN164144;OCCURENCE=1(breast)	0.268	NA	3.352976
1317	4	73316592	73316592	C	T	intronic	ADAMTS3	NA	NA	NA	intronic	ENSG00000156140	NA	NA	NA	NA	NA	4q13.3	NA	NA	NA	NA	rs3907271	0.62	0.62	0.573	0.67512	0.6471	0.5694	0.7983	0.6127	0.8098	0.63	0.54	0.76	0.59	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.063062	NA	NA	NA	NA	NA	0.674	NA	3.3529
1317	5	6611757	6611757	A	T	intronic	NSUN2	NA	NA	NA	intronic	ENSG00000037474	NA	NA	NA	NA	NA	5p15.31	NA	NA	NA	NA	rs10454287	0.58	0.58	0.533	0.540735	0.6471	0.6667	0.5778	0.3457	0.5389	0.64	0.67	0.62	0.36	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.182417	NA	NA	NA	NA	NA	0.572	NA	3.3529
1317	9	82972980	82972980	A	G	intergenic	TLE4,TLE1	dist=631324;dist=1225618	NA	NA	ncRNA_exonic	ENSG00000236521	NA	NA	NA	NA	NA	9q21.31	NA	NA	NA	NA	rs1857470	0.78	0.78	0.768	0.765176	0.6471	0.9653	0.7709	0.7269	0.728	0.66	0.98	0.75	0.74	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.037782	NA	NA	NA	NA	NA	0.688	NA	3.3529
1317	10	412449	412449	A	G	intronic	DIP2C	NA	NA	NA	intronic	ENSG00000151240	NA	NA	NA	NA	NA	10p15.3	NA	NA	NA	NA	rs1133113	0.42	0.42	0.404	0.371805	0.6471	0.3234	0.4553	0.1717	0.3497	0.64	0.32	0.47	0.18	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.923209	NA	NA	NA	NA	NA	0.529	NA	3.3529
1317	12	132326051	132326051	C	T	intronic	MMP17	NA	NA	NA	intronic	ENSG00000198598	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs4964929	0.66	0.66	0.668	0.709465	0.6471	0.6885	0.6066	0.7731	0.7822	0.65	0.65	0.57	0.77	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.0848	NA	NA	NA	NA	NA	0.754	NA	3.3529
1317	13	41807950	41807950	T	C	intronic	MTRF1	NA	NA	NA	intronic	ENSG00000120662	NA	NA	NA	NA	NA	13q14.11	NA	NA	NA	NA	rs3751344	0.62	0.62	0.587	0.617412	0.6471	0.5526	0.6931	0.5847	0.6442	0.65	0.55	0.71	0.59	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.368454	NA	NA	NA	NA	NA	0.703	NA	3.3529
1317	13	41814277	41814277	C	T	intronic	MTRF1	NA	NA	NA	intronic	ENSG00000120662	NA	NA	NA	NA	NA	13q14.11	NA	NA	NA	NA	rs9566727	0.59	0.59	0.519	0.581669	0.6471	0.5526	0.6859	0.4531	0.6442	0.65	0.55	0.7	0.47	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.029014	NA	NA	NA	NA	NA	0.58	NA	3.3529
1317	13	53036398	53036398	A	G	intronic	CKAP2	NA	NA	NA	intronic	ENSG00000136108	NA	NA	NA	NA	NA	13q14.3	NA	NA	NA	NA	rs3803262	0.57	0.57	0.543	0.537939	0.6471	0.6389	0.611	0.3381	0.5399	0.63	0.63	0.6	0.38	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.119599	NA	NA	NA	NA	NA	0.536	NA	3.3529
1317	17	39680935	39680935	A	G	intronic	KRT19	NA	NA	NA	intronic	ENSG00000171345	NA	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs4796780	0.72	0.72	0.685	0.732029	0.6471	0.9137	0.7853	0.5915	0.7843	0.63	0.93	0.74	0.59	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.139174	NA	NA	NA	NA	NA	0.754	NA	3.3529
1317	6	32818678	32818678	G	A	intronic	TAP1	NA	NA	NA	intronic	ENSG00000168394,ENSG00000240065	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs2071538	0.13	0.13	0.113	0.101837	0.2326	0.0546	0.1383	0.0061	0.1196	0.24	0.09	0.13	0.02	0.1806	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.653644	NA	NA	0.234306	0.050993	NA	0.072	NA	3.352494
1317	17	4455166	4455166	A	G	intronic	MYBBP1A	NA	NA	NA	intronic	ENSG00000132382	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs3816686	0.29	0.29	0.266	0.291933	0.1998	0.5605	0.3314	0.1021	0.3384	0.2	0.56	0.28	0.12	0.2465	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.29112	NA	NA	0.201512	0.13238	NA	0.167	NA	3.352188
1317	17	76129636	76129636	T	C	intronic	TMC8	NA	NA	NA	intronic	ENSG00000167895	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs417780	0.28	0.28	0.247	0.30012	0.2167	0.252	0.2219	0.4561	0.2802	0.2	0.22	0.23	0.48	0.2316	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.986442	NA	NA	0.199767	0.404675	NA	0.283	NA	3.351933
1317	9	130940822	130940822	C	T	intronic	CIZ1	NA	NA	NA	intronic	ENSG00000148337	NA	NA	NA	NA	NA	9q34.11	NA	NA	NA	NA	rs3892074	0.71	0.71	0.661	0.6873	0.6481	0.9435	0.7579	0.4228	0.771	0.67	0.96	0.75	0.43	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.470142	NA	NA	NA	NA	NA	0.739	NA	3.3519
1317	14	106188045	106188045	C	T	intergenic	ELK2AP,KIAA0125	dist=48901;dist=195793	NA	NA	ncRNA_intronic	ENSG00000253692	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs11624491	0.47	0.47	0.477	0.487021	0.6481	0.5635	0.4135	0.3691	0.454	0.61	0.38	0.43	0.41	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.716848	NA	NA	NA	NA	NA	0.522	NA	3.3519
1317	1	212526288	212526288	C	T	ncRNA_exonic	SNORA16B	NA	NA	NA	ncRNA_exonic	ENSG00000201544	NA	NA	NA	NA	NA	1q32.3	NA	NA	Name=3	NA	rs792442	0.81	0.81	0.802	0.802915	0.7535	0.7768	0.7997	0.9508	0.683	0.75	0.78	0.8	0.93	0.779	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.764217	NA	NA	0.78227	0.928082	NA	0.804	NA	3.3518966
1317	16	3097568	3097568	C	A	intronic	MMP25	NA	NA	NA	intronic	ENSG00000008516	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs3743937	0.14	0.14	0.099	0.151358	0.2227	0.1329	0.1628	0.0424	0.2362	0.21	0.11	0.17	0.04	0.2147	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.143418	NA	NA	0.210777	0.065544	NA	0.181	NA	3.351823
1317	19	8148301	8148301	G	A	intronic	FBN3	NA	NA	NA	intronic	ENSG00000142449	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs17202517	0.15	0.15	0.148	0.114816	0.2276	0.1111	0.121	0.0166	0.1309	0.24	0.13	0.14	0.02	0.1923	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.651446	NA	NA	0.228372	0.047435	NA	0.188	NA	3.351728
1317	2	131116404	131116404	T	C	intronic	PTPN18	NA	NA	NA	intronic	ENSG00000072135	NA	NA	NA	NA	NA	2q21.1	NA	NA	NA	NA	rs7568956	0.33	0.33	0.324	0.349441	0.2048	0.3185	0.2421	0.6536	0.1953	0.2	0.31	0.25	0.6	0.2361	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.555588	NA	NA	0.207442	0.58148	NA	0.297	NA	3.351658
1317	11	118959331	118959331	G	A	intronic	HMBS	NA	NA	NA	intronic	ENSG00000256269	NA	NA	NA	NA	NA	11q23.3	NA	NA	Name=2	NA	rs17075	0.54	0.54	0.574	0.572883	0.5268	0.3185	0.7017	0.7912	0.4959	0.53	0.29	0.67	0.77	0.5581	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.5087	1.5087	NA	0.563446	0.745682	NA	0.609	NA	3.351654
1317	19	56511217	56511217	G	A	intronic	NLRP5	NA	NA	NA	intronic	ENSG00000171487	NA	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs12462690	0.25	0.25	0.212	0.257987	0.326	0.1022	0.3876	0.1921	0.3456	0.33	0.1	0.4	0.21	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.5114	NA	NA	0.322439	0.229769	NA	0.225	NA	3.351561
1317	5	43161317	43161317	T	C	intronic	ZNF131	NA	NA	NA	intronic	ENSG00000172262	NA	NA	NA	NA	NA	5p12	NA	NA	NA	NA	rs55714804	0.14	0.14	0.105	0.125399	0.2187	0.005	0.2824	0.0688	0.1186	0.22	0.0035	0.28	0.07	0.1987	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.888787	NA	NA	0.231245	0.079921	NA	0.152	NA	3.351355
1317	6	66803535	66803535	C	A	intergenic	SLC25A51P1,NONE	dist=304159;dist=NONE	NA	NA	ncRNA_exonic	ENSG00000218890	NA	NA	NA	NA	NA	6q12	NA	NA	NA	NA	rs2881644	0.68	0.68	0.674	0.673522	0.6491	0.6458	0.6499	0.7753	0.6063	0.64	0.64	0.68	0.78	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.551473	NA	NA	NA	NA	NA	0.739	NA	3.3509
1317	19	55447572	55447572	A	G	intronic	NLRP7	NA	NA	NA	intronic	ENSG00000167634	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs775876	0.68	0.68	0.695	0.671326	0.6491	0.5446	0.5793	0.9448	0.5204	0.65	0.58	0.6	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.688688	NA	NA	NA	NA	NA	0.717	NA	3.3509
1317	8	100994389	100994389	C	T	intronic	RGS22	NA	NA	NA	intronic	ENSG00000132554	NA	NA	NA	NA	NA	8q22.2	NA	NA	NA	NA	rs6468704	0.35	0.35	0.375	0.372604	0.2087	0.1726	0.2075	0.8548	0.2127	0.21	0.21	0.2	0.83	0.2474	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.286835	NA	NA	0.19384	0.728291	NA	0.428	NA	3.35006
1317	6	111695073	111695073	C	T	exonic	REV3L	NA	synonymous SNV	REV3L:NM_002912:exon13:c.G4485A:p.S1495S	exonic	ENSG00000009413	NA	synonymous SNV	ENSG00000009413:ENST00000368802:exon13:c.G4485A:p.S1495S,ENSG00000009413:ENST00000358835:exon14:c.G4485A:p.S1495S,ENSG00000009413:ENST00000368805:exon14:c.G4485A:p.S1495S,ENSG00000009413:ENST00000435970:exon15:c.G4251A:p.S1417S	NA	NA	6q21	NA	NA	NA	NA	rs455645	0.59	0.59	0.569	0.586462	0.7883	0.4534	0.7435	0.3654	0.7035	0.78	0.47	0.72	0.35	0.7159	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.784571	NA	NA	0.812442	0.439855	NA	0.572	NA	3.3500246
1317	3	75397679	75397679	G	A	intergenic	MIR4444-1,FAM86DP	dist=133980;dist=73024	NA	NA	ncRNA_exonic	ENSG00000243674	NA	NA	NA	NA	NA	3p12.3	NA	NA	NA	NA	rs3860597	0.58	0.58	0.57	0.534145	0.6501	0.7232	0.7147	0.171	0.5828	0.65	0.75	0.69	0.2	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.817364	NA	NA	NA	NA	NA	0.514	NA	3.3499
1317	4	9698240	9698240	G	A	intergenic	MIR548I2,DRD5	dist=140303;dist=85018	NA	NA	ncRNA_intronic	ENSG00000186234	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs13141264	0.47	0.47	0.408	0.452875	0.6501	0.4554	0.4942	0.2723	0.4622	0.63	0.42	0.54	0.22	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.661303	NA	NA	NA	NA	NA	0.181	NA	3.3499
1317	19	55209313	55209313	G	C	intergenic	LILRB4,LILRP2	dist=29467;dist=10288	NA	NA	ncRNA_intronic	ENSG00000186152	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs4806810	0.81	0.81	0.8	0.688099	0.6501	0.8522	0.6844	0.615	0.6595	0.72	0.98	0.77	0.77	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.077952	NA	NA	NA	NA	NA	0.79	NA	3.3499
1317	22	36708338	36708338	A	G	intronic	MYH9	NA	NA	NA	intronic	ENSG00000100345	NA	NA	NA	NA	NA	22q12.3	NA	NA	NA	NA	rs2157257	0.44	0.44	0.366	0.38119	0.6501	0.2073	0.6599	0.1725	0.3681	0.65	0.23	0.65	0.23	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.946977	NA	NA	NA	NA	NA	0.442	NA	3.3499
1317	1	75609049	75609049	A	C	intronic	LHX8	NA	NA	NA	intronic	ENSG00000162624	NA	NA	NA	NA	NA	1p31.1	NA	NA	NA	NA	rs12041465	0.35	0.35	0.327	0.322484	0.171	0.7956	0.3343	0.0968	0.2873	0.17	0.83	0.31	0.1	0.2856	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.136582	NA	NA	0.193623	0.112324	NA	0.384	NA	3.349777
1317	20	44259673	44259673	G	T	UTR3	WFDC10A	NM_080753:c.*16G>T	NA	NA	UTR3	ENSG00000180305	ENST00000372643:c.*16G>T	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs1487322	0.37	0.37	0.377	0.372604	0.3231	0.4266	0.2565	0.3903	0.4264	0.31	0.43	0.29	0.45	0.3389	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.355759	NA	NA	0.321744	0.376305	ID=COSN166538;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.283	NA	3.3495894
1317	22	41919330	41919330	A	G	intronic	ACO2	NA	NA	NA	intronic	ENSG00000100412	NA	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs12484694	0.18	0.18	0.137	0.204273	0.2147	0.0556	0.4366	0.0862	0.3415	0.21	0.06	0.45	0.09	0.2363	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.644491	NA	NA	0.199419	0.092828	NA	0.239	NA	3.349581
1317	1	157517127	157517127	C	T	intronic	FCRL5	NA	NA	NA	intronic	ENSG00000143297	NA	NA	NA	NA	NA	1q23.1	NA	NA	NA	NA	rs7531685	0.2	0.2	0.184	0.182308	0.2386	0.0794	0.1671	0.2345	0.1708	0.25	0.08	0.19	0.25	0.2033	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.147092	NA	NA	0.208689	0.228881	NA	0.203	NA	3.349411
1317	19	8137902	8137902	C	T	intronic	FBN3	NA	NA	NA	intronic	ENSG00000142449	NA	NA	NA	NA	NA	19p13.2	NA	Name=Max	NA	NA	rs7254691	0.6	0.6	0.599	0.575479	0.5586	0.3333	0.6455	0.8964	0.3589	0.57	0.37	0.64	0.87	0.5526	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.028537	NA	NA	0.539651	0.844984	NA	0.616	NA	3.349149
1317	6	89650922	89650922	C	A	intronic	RNGTT	NA	NA	NA	intronic	ENSG00000111880	NA	NA	NA	NA	NA	6q15	NA	NA	NA	NA	rs9451108	0.29	0.29	0.312	0.328474	0.2097	0.1647	0.1585	0.671	0.2771	0.21	0.17	0.2	0.64	0.2354	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.42903	NA	NA	0.20593	0.57172	ID=COSN167850;OCCURENCE=1(large_intestine)	0.457	NA	3.34897
1317	11	71527896	71527896	G	A	intergenic	ALG1L9P,DEFB108B	dist=2991;dist=16350	NA	NA	ncRNA_exonic	ENSG00000214534	NA	NA	NA	NA	NA	11q13.4	NA	NA	NA	NA	rs56524498	0.41	0.41	0.448	0.484225	0.6511	0.4534	0.4308	0.2844	0.6524	0.52	0.4	0.41	0.24	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.049687	NA	0	NA	NA	NA	0.014	NA	3.3489
1317	11	71529119	71529119	A	G	intergenic	ALG1L9P,DEFB108B	dist=4214;dist=15127	NA	NA	ncRNA_intronic	ENSG00000214534	NA	NA	NA	NA	NA	11q13.4	NA	NA	NA	NA	rs3819230	NA	NA	0.43	0.485423	0.6511	0.4444	0.4308	0.295	0.6534	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.977669	NA	NA	NA	NA	NA	0.007	NA	3.3489
1317	11	71529252	71529252	T	A	intergenic	ALG1L9P,DEFB108B	dist=4347;dist=14994	NA	NA	ncRNA_exonic	ENSG00000214534	NA	NA	NA	NA	NA	11q13.4	NA	NA	NA	NA	rs3819237	0.48	0.48	0.451	0.481629	0.6511	0.4415	0.4308	0.2837	0.6524	0.64	0.43	0.47	0.31	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.193392	NA	0.55	NA	NA	NA	0.109	NA	3.3489
1317	12	62892905	62892905	C	G	intronic	MON2	NA	NA	NA	intronic	ENSG00000061987	NA	NA	NA	NA	NA	12q14.1	NA	NA	NA	NA	rs4025987	0.68	0.68	0.675	0.684704	0.6511	0.623	0.6671	0.7874	0.6564	0.65	0.65	0.7	0.77	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.144578	NA	NA	NA	NA	NA	0.652	NA	3.3489
1317	15	85721912	85721912	A	G	intergenic	PDE8A,LOC642423	dist=39536;dist=25995	NA	NA	ncRNA_exonic	ENSG00000259270	NA	NA	NA	NA	NA	15q25.3	NA	NA	NA	NA	rs3964197	0.77	0.77	0.755	0.786741	0.6511	0.9623	0.7781	0.73	0.8282	0.66	0.97	0.73	0.74	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.437673	NA	NA	NA	NA	NA	0.761	NA	3.3489
1317	19	34687746	34687746	C	A	intronic	LSM14A	NA	NA	NA	intronic	ENSG00000257103	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs3119815	0.53	0.53	0.539	0.52516	0.6511	0.1597	0.5504	0.7844	0.4039	0.65	0.16	0.56	0.78	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.094384	NA	NA	NA	NA	NA	0.514	NA	3.3489
1317	17	38955274	38955274	A	C	intronic	KRT28	NA	NA	NA	intronic	ENSG00000173908	NA	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs7224150	0.14	0.14	0.119	0.131989	0.2306	0.0377	0.1801	0.0711	0.1759	0.24	0.03	0.19	0.07	0.1936	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.065341	NA	NA	0.226913	0.10168	NA	0.101	NA	3.348887
1317	6	153296772	153296772	A	G	intronic	FBXO5	NA	NA	NA	intronic	ENSG00000112029	NA	NA	NA	NA	NA	6q25.2	NA	NA	NA	NA	rs9479472	0.14	0.14	0.159	0.113618	0.2425	0.0724	0.1138	0.0598	0.0961	0.24	0.08	0.15	0.06	0.189	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.591647	NA	NA	0.220103	0.089893	NA	0.109	NA	3.348397
1317	22	50942761	50942761	A	G	intronic	LMF2	NA	NA	NA	intronic	ENSG00000100258	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs60021445	0.16	0.16	0.126	0.142173	0.2316	0.0397	0.1412	0.1626	0.1288	0.23	0.03	0.17	0.18	0.1896	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.87412	NA	NA	0.230465	0.16121	NA	NA	NA	3.348335
1317	1	2420913	2420913	A	G	intronic	PLCH2	NA	NA	NA	intronic	ENSG00000149527	NA	NA	NA	NA	NA	1p36.32	NA	NA	NA	NA	rs6668720	0.67	0.67	0.654	0.673922	0.6521	0.7907	0.6729	0.5983	0.6789	0.64	0.78	0.67	0.6	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.13023	NA	NA	NA	NA	NA	0.507	NA	3.3479
1317	1	32160918	32160918	A	G	intronic	COL16A1	NA	NA	NA	intronic	ENSG00000084636	NA	NA	NA	NA	NA	1p35.2	NA	NA	NA	NA	rs6656079	0.59	0.59	0.586	0.58746	0.6521	0.3611	0.6686	0.8139	0.3906	0.64	0.32	0.63	0.8	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.120526	NA	NA	NA	NA	NA	0.616	NA	3.3479
1317	1	155931368	155931368	G	A	intronic	ARHGEF2	NA	NA	NA	intronic	ENSG00000116584	NA	NA	NA	NA	NA	1q22	NA	NA	NA	NA	rs4661175	0.39	0.39	0.39	0.398562	0.6521	0.1577	0.6009	0.1551	0.5716	0.65	0.14	0.57	0.15	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.51467	NA	NA	NA	NA	NA	0.348	NA	3.3479
1317	4	17581617	17581617	T	A	intronic	LAP3	NA	NA	NA	intronic	ENSG00000002549	NA	NA	NA	NA	NA	4p15.32	NA	NA	NA	NA	rs10939736	0.67	0.67	0.614	0.634385	0.6521	0.8542	0.719	0.4735	0.547	0.66	0.86	0.69	0.46	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.341779	NA	NA	NA	NA	NA	0.696	NA	3.3479
1317	4	17585014	17585014	G	C	intronic	LAP3	NA	NA	NA	intronic	ENSG00000002549	NA	NA	NA	NA	NA	4p15.32	NA	NA	NA	NA	rs1476836	0.67	0.67	0.657	0.634585	0.6521	0.8542	0.719	0.4743	0.547	0.65	0.86	0.69	0.46	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.447903	1.447903	NA	NA	NA	NA	0.696	NA	3.3479
1317	5	101755430	101755430	T	C	intronic	SLCO6A1	NA	NA	NA	intronic	ENSG00000205359	NA	NA	NA	NA	NA	5q21.1	NA	NA	NA	NA	rs1542296	0.6	0.6	0.574	0.582468	0.6521	0.4593	0.5331	0.6589	0.5695	0.65	0.5	0.57	0.64	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.365625	NA	NA	NA	NA	NA	0.551	NA	3.3479
1317	6	35424188	35424188	A	G	intronic	FANCE	NA	NA	NA	intronic	ENSG00000112039	NA	NA	NA	NA	NA	6p21.31	NA	NA	NA	NA	rs3800377	0.7	0.7	0.687	0.71905	0.6521	0.5446	0.7839	0.8843	0.6984	0.65	0.56	0.79	0.86	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.971819	NA	NA	NA	NA	NA	0.674	NA	3.3479
1317	14	39764007	39764007	C	G	intronic	CTAGE5	NA	NA	NA	intronic	ENSG00000150527,ENSG00000258941	NA	NA	NA	NA	NA	14q21.1	NA	NA	NA	NA	rs12432397	0.51	0.51	0.525	0.491214	0.6521	0.4246	0.5548	0.2655	0.6544	0.66	0.45	0.59	0.31	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.111877	NA	NA	NA	NA	NA	0.572	NA	3.3479
1317	16	50759547	50759547	A	T	intronic	NOD2	NA	NA	NA	intronic	ENSG00000167207	NA	NA	NA	NA	NA	16q12.1	NA	NA	NA	NA	rs1077861	0.39	0.39	0.388	0.334864	0.6521	0.1498	0.4323	0.2141	0.2935	0.66	0.17	0.4	0.22	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.758806	NA	NA	NA	NA	NA	0.471	NA	3.3479
1317	1	151039609	151039609	A	G	intronic	MLLT11	NA	NA	NA	UTR5	ENSG00000197622	ENST00000439374:c.-11403T>C	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs3738481	0.85	0.85	0.848	0.846845	0.8191	0.9048	0.8242	0.8411	0.8395	0.82	0.91	0.83	0.85	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.194932	NA	NA	NA	NA	NA	0.841	NA	3.3475667
1317	12	21661508	21661508	A	G	intronic	GOLT1B	NA	NA	NA	intronic	ENSG00000111711	NA	NA	NA	NA	NA	12p12.1	NA	NA	NA	NA	rs11046091	0.22	0.22	0.237	0.229233	0.2167	0.0079	0.196	0.5393	0.0746	0.2	0.0035	0.2	0.51	0.2063	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.48677	NA	NA	0.229569	0.463686	NA	0.399	NA	3.347431
1317	11	71529136	71529136	T	C	intergenic	ALG1L9P,DEFB108B	dist=4231;dist=15110	NA	NA	ncRNA_intronic	ENSG00000214534	NA	NA	NA	NA	NA	11q13.4	NA	NA	NA	NA	rs3819231	0.5	0.5	0.38	0.497204	0.6531	0.4563	0.4366	0.3253	0.6544	0.65	0.45	0.47	0.36	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.794717	NA	NA	NA	NA	NA	0.014	NA	3.3469
1317	3	45813025	45813025	A	G	intronic	SLC6A20	NA	NA	NA	intronic	ENSG00000163817	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs758387	0.45	0.45	0.428	0.428514	0.6531	0.3929	0.5014	0.1747	0.5256	0.67	0.34	0.52	0.19	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.011208	NA	NA	NA	NA	NA	0.399	NA	3.3469
1317	5	101726851	101726851	A	G	intronic	SLCO6A1	NA	NA	NA	intronic	ENSG00000205359	NA	NA	NA	NA	NA	5q21.1	NA	NA	NA	NA	rs1452065	0.6	0.6	0.577	0.585463	0.6531	0.4613	0.5331	0.6672	0.5706	0.65	0.5	0.57	0.65	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.190742	NA	NA	NA	NA	NA	0.565	NA	3.3469
1317	10	5936425	5936425	C	G	UTR5	FBXO18	NM_032807:c.-28C>G	NA	NA	UTR5	ENSG00000134452	ENST00000379999:c.-28C>G	NA	NA	NA	NA	10p15.1	NA	NA	NA	NA	rs12781700	0.26	0.26	0.27	0.216054	0.3559	0.0317	0.2205	0.3162	0.1237	0.37	0.02	0.29	0.33	0.2786	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.636128	NA	NA	0.352209	0.300045	NA	0.283	NA	3.3466244
1317	22	23089996	23089996	T	C	intergenic	GGTLC2,MIR650	dist=99628;dist=75274	NA	NA	intronic	ENSG00000211665	NA	NA	NA	NA	NA	22q11.22	NA	Name=Pol2	NA	NA	rs2040566	0.72	0.72	0.699	0.713259	0.6292	0.8641	0.7464	0.6687	0.681	0.63	0.88	0.72	0.67	0.6911	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.155773	NA	NA	NA	NA	NA	0.565	NA	3.3463667
1317	14	75002607	75002607	G	T	intronic	LTBP2	NA	NA	NA	intronic	ENSG00000119681	NA	NA	NA	NA	NA	14q24.3	NA	NA	NA	NA	rs3742794	0.26	0.26	0.282	0.238618	0.2157	0.1944	0.3098	0.3457	0.1125	0.24	0.23	0.25	0.33	0.22	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.201691	NA	NA	0.218372	0.335225	NA	0.254	NA	3.345928
1317	1	32163950	32163950	G	C	intronic	COL16A1	NA	NA	NA	intronic	ENSG00000084636	NA	NA	NA	NA	NA	1p35.2	NA	NA	NA	NA	rs2297674	0.53	0.53	0.512	0.559105	0.6541	0.3056	0.6383	0.6097	0.5982	0.65	0.27	0.59	0.61	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.834166	1.834166	NA	NA	NA	NA	0.58	NA	3.3459
1317	5	150072693	150072693	A	G	intronic	RBM22	NA	NA	NA	intronic	ENSG00000086589	NA	NA	NA	NA	NA	5q33.1	NA	NA	NA	NA	rs33410	0.84	0.84	0.853	0.860623	0.6541	0.998	0.745	0.9909	0.8374	0.66	1	0.75	0.99	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.505167	NA	NA	NA	NA	NA	0.739	NA	3.3459
1317	7	142104667	142104667	C	G	intergenic	LOC730441,MTRNR2L6	dist=132599;dist=269464	NA	NA	upstream	ENSG00000211732	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs361430	0.25	0.25	NA	0.309305	0.1541	0.1121	0.2277	0.6437	0.2781	0.13	0.11	0.27	0.59	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.16953	NA	NA	NA	NA	NA	0.377	NA	3.3459
1317	11	7091772	7091772	C	A	intronic	NLRP14	NA	NA	NA	intronic	ENSG00000158077	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs10769763	0.69	0.69	0.691	0.714257	0.6541	0.9157	0.67	0.5151	0.8691	0.66	0.91	0.66	0.52	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.169384	NA	NA	NA	NA	NA	0.551	NA	3.3459
1317	12	111296332	111296332	T	C	intronic	CCDC63	NA	NA	NA	intronic	ENSG00000173093	NA	NA	NA	NA	NA	12q24.11	NA	NA	NA	NA	rs4766432	0.6	0.6	0.545	0.58726	0.6541	0.6468	0.7032	0.3933	0.637	0.65	0.66	0.65	0.4	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.596719	NA	NA	NA	NA	NA	0.616	NA	3.3459
1317	16	19051520	19051520	A	G	intronic	TMC7	NA	NA	NA	intronic	ENSG00000170537	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs11074355	0.61	0.61	0.575	0.601837	0.6541	0.7798	0.6369	0.3623	0.6636	0.64	0.78	0.65	0.33	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.108595	NA	NA	NA	NA	NA	0.638	NA	3.3459
1317	22	26899474	26899474	T	C	intronic	TFIP11	NA	NA	NA	intronic	ENSG00000100109	NA	NA	NA	NA	NA	22q12.1	NA	NA	NA	NA	rs134136	0.66	0.66	0.664	0.653954	0.6541	0.6746	0.6484	0.7489	0.5082	0.64	0.65	0.65	0.73	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.734153	NA	NA	NA	NA	NA	0.717	NA	3.3459
1317	19	7529415	7529415	C	T	intronic	ARHGEF18	NA	NA	NA	intronic	ENSG00000104880,ENSG00000268861	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs2287919	0.17	0.17	0.17	0.155152	0.2396	0.119	0.2061	0.0832	0.1667	0.25	0.14	0.18	0.08	0.1985	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.325549	NA	NA	0.216047	0.098956	NA	0.167	NA	3.345853
1317	12	30787228	30787228	C	T	intronic	IPO8	NA	NA	NA	intronic	ENSG00000133704	NA	NA	NA	NA	NA	12p11.21	NA	NA	NA	NA	rs10843797	0.18	0.18	0.188	0.188099	0.2256	0.0734	0.1282	0.292	0.1697	0.23	0.06	0.11	0.27	0.2077	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.197957	NA	NA	0.221047	0.265093	NA	0.181	NA	3.345653
1317	1	40229319	40229319	G	A	intronic	BMP8B,PPIE	NA	NA	NA	UTR3	ENSG00000116985	ENST00000397360:c.*38C>T	NA	NA	NA	NA	1p34.2	NA	NA	NA	NA	rs493473	0.35	0.35	0.279	NA	NA	NA	NA	NA	NA	0.4	0.22	0.37	0.42	0.3685	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.093983	NA	NA	0.452561	0.342798	NA	0.246	NA	3.3456057
1317	20	37580130	37580130	A	C	intronic	FAM83D	NA	NA	NA	intronic	ENSG00000101447	NA	NA	NA	NA	NA	20q11.23	NA	NA	NA	NA	rs4300896	0.4	0.4	0.4	0.385184	0.34	0.4226	0.3818	0.4728	0.2771	0.35	0.36	0.37	0.53	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.084634	NA	NA	0.314917	0.469178	NA	0.341	NA	3.345083
1317	2	201466954	201466954	C	G	intronic	AOX1	NA	NA	NA	intronic	ENSG00000138356	NA	NA	NA	NA	NA	2q33.1	NA	NA	NA	NA	rs2248130	0.4	0.4	0.401	0.377196	0.3231	0.4395	0.3458	0.4236	0.3282	0.33	0.45	0.33	0.49	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.218017	NA	NA	0.331867	0.421243	NA	0.5	NA	3.345033
1318	1	237620049	237620049	T	C	intronic	RYR2	NA	NA	NA	intronic	ENSG00000198626	NA	NA	NA	NA	NA	1q43	NA	NA	NA	NA	rs2045955	0.54	0.54	0.521	0.53115	0.5596	0.7788	0.5245	0.2716	0.6022	0.57	0.77	0.52	0.25	0.5514	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.376286	NA	NA	0.544064	0.288644	NA	0.551	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000036708.1;CLNDSDB=.;CLNDSDBID=.	3.344936
1318	1	155822971	155822971	C	T	intronic	GON4L	NA	NA	NA	intronic	ENSG00000116580	NA	NA	NA	NA	NA	1q22	NA	NA	NA	NA	rs822490	0.43	0.43	0.407	0.447883	0.6551	0.3056	0.6037	0.1891	0.6207	0.65	0.27	0.57	0.18	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.164718	NA	NA	NA	NA	NA	0.413	NA	3.3449
1318	5	169568872	169568872	A	G	intergenic	FOXI1,C5orf58	dist=32143;dist=91078	NA	NA	ncRNA_exonic	ENSG00000253219	NA	NA	NA	NA	NA	5q35.1	NA	NA	NA	NA	rs7729440	0.54	0.54	0.528	0.521765	0.6551	0.4464	0.7118	0.2935	0.636	0.64	0.47	0.71	0.34	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.022395	NA	NA	NA	NA	NA	0.478	NA	3.3449
1318	5	179731635	179731635	C	G	intronic	GFPT2	NA	NA	NA	intronic	ENSG00000131459	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs888922	0.62	0.62	0.601	0.592452	0.6551	0.8274	0.6081	0.3661	0.5808	0.66	0.84	0.6	0.34	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.590467	NA	NA	NA	NA	NA	0.565	NA	3.3449
1318	17	81051887	81051887	T	G	intronic	METRNL	NA	NA	NA	intronic	ENSG00000176845	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs7223467	0.55	0.55	0.548	0.572484	0.6551	0.4216	0.513	0.6067	0.6391	0.64	0.36	0.55	0.62	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.509334	NA	NA	NA	NA	NA	0.558	NA	3.3449
1318	12	117672339	117672339	T	C	intronic	NOS1	NA	NA	NA	intronic	ENSG00000089250	NA	NA	NA	NA	NA	12q24.22	NA	NA	NA	NA	rs1875140	0.3	0.3	0.32	0.312101	0.2137	0.3938	0.2118	0.4213	0.2526	0.21	0.37	0.2	0.42	0.2403	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.463741	NA	NA	0.201297	0.332148	NA	0.29	NA	3.344703
1318	1	28220484	28220484	C	A	intronic	RPA2	NA	NA	NA	intronic	ENSG00000117748	NA	NA	NA	NA	NA	1p35.3	NA	NA	NA	NA	rs17257252	0.13	0.13	0.124	0.105831	0.2296	0.0823	0.1167	0.0091	0.1258	0.24	0.08	0.15	0.01	0.1862	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.568702	NA	NA	0.239535	0.043123	NA	0.08	NA	3.344665
1318	19	6475613	6475613	T	C	intronic	DENND1C	NA	NA	NA	UTR3	ENSG00000205744	ENST00000590867:c.*41A>G	NA	NA	NA	NA	19p13.3	NA	NA	Name=2	NA	rs3745571	0.49	0.49	0.47	0.469848	0.6014	0.3383	0.5663	0.3865	0.5143	0.61	0.34	0.56	0.43	0.5633	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.811435	NA	NA	0.657392	0.458293	NA	0.377	NA	3.3445747
1318	19	2097986	2097986	T	C	intronic	IZUMO4	NA	NA	NA	intronic	ENSG00000099840	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs7250336	0.21	0.21	0.208	0.243011	0.2237	0.122	0.1398	0.3442	0.3241	0.2	0.13	0.16	0.34	0.2208	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.251515	NA	NA	0.211047	0.332501	NA	0.123	NA	3.344453
1318	11	193096	193096	T	C	UTR5	LOC653486,SCGB1C1	NM_001097610:c.-4T>C;NM_145651:c.-4T>C	NA	NA	UTR5	ENSG00000188076	ENST00000342878:c.-4T>C	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs2280539	0.47	0.47	0.444	NA	NA	NA	NA	NA	NA	0.52	0.41	0.44	0.48	0.4964	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.586047	NA	NA	0.492609	0.442937	NA	0.507	NA	3.3443244
1318	19	580811	580811	G	A	intronic	BSG	NA	NA	NA	intronic	ENSG00000172270	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs11879178	0.25	0.25	0.211	0.326677	0.1899	0.4563	0.2867	0.3275	0.3609	0.14	0.41	0.22	0.28	0.2765	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.734425	NA	NA	0.189595	0.279954	NA	NA	NA	3.344005
1318	6	30552937	30552937	A	C	intronic	ABCF1	NA	NA	NA	intronic	ENSG00000204574	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs3130244	0.6	0.6	0.601	0.628794	0.6561	0.5982	0.5375	0.5605	0.7894	0.67	0.62	0.52	0.53	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.708474	NA	NA	NA	NA	NA	0.674	NA	3.3439
1318	15	97094594	97094594	T	C	intergenic	NR2F2,SPATA8	dist=211102;dist=232085	NA	NA	upstream	ENSG00000259340	NA	NA	NA	NA	NA	15q26.2	NA	NA	NA	NA	rs28734871	0.18	0.18	0.181	0.188498	0.1561	0.0843	0.1167	0.3797	0.1217	0.15	0.09	0.13	0.37	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.877441	NA	NA	NA	NA	NA	0.21	NA	3.3439
1318	20	29557682	29557682	G	A	intergenic	NONE,FRG1B	dist=NONE;dist=54197	NA	NA	downstream	ENSG00000231934	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs6118886	0.18	0.18	0.132	0.199281	0.1561	0.2093	0.1599	0.2133	0.2423	0.15	0.21	0.16	0.23	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.575784	1.575784	NA	NA	NA	NA	NA	NA	3.3439
1318	10	27405096	27405096	A	G	intronic	YME1L1	NA	NA	NA	intronic	ENSG00000136758	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs2297152	0.34	0.34	0.332	0.347045	0.2247	0.5496	0.1873	0.3071	0.4315	0.23	0.6	0.19	0.3	0.2532	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.554536	NA	NA	0.178256	0.303904	NA	0.275	NA	3.343844
1318	1	186270894	186270894	A	G	ncRNA_intronic	MIR548F1,RNU6-72P	NA	NA	NA	intronic	ENSG00000116690	NA	NA	NA	NA	NA	1q31.1	NA	NA	NA	NA	rs1547084	0.25	0.25	0.231	0.232029	0.33	0.128	0.4063	0.1505	0.2249	0.35	0.13	0.4	0.13	0.3051	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.191483	NA	NA	0.354419	0.189968	NA	0.217	NA	3.3438143
1318	10	27437994	27437994	C	T	intronic	YME1L1	NA	NA	NA	intronic	ENSG00000136758	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs10764675	0.34	0.34	0.339	0.347244	0.2247	0.5506	0.1873	0.3071	0.4315	0.23	0.6	0.19	0.3	0.2537	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.822655	NA	NA	0.177791	0.301407	NA	0.217	NA	3.343809
1318	2	89161322	89161322	C	G	intergenic	MIR4436A,NONE	dist=49354;dist=NONE	NA	NA	ncRNA_intronic	ENSG00000231486	NA	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs232223	0.39	0.39	0.39	0.352436	0.3151	0.3353	0.3703	0.4607	0.2495	0.32	0.42	0.41	0.48	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.488759	NA	NA	0.34111	0.470333	ID=COSN395702;OCCURENCE=1(lung)	0.21	NA	3.34379
1318	4	144920638	144920638	A	T	intronic	GYPB	NA	NA	NA	ncRNA_intronic	ENSG00000248828	NA	NA	NA	NA	NA	4q31.21	NA	NA	NA	NA	rs7662277	0.21	0.21	0.171	0.235024	0.339	0.0347	0.3429	0.1846	0.3262	0.29	0.04	0.33	0.19	0.3394	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.271569	NA	NA	0.311217	0.186798	NA	0.312	NA	3.3437163
1318	3	183905103	183905103	G	C	intronic	ABCF3	NA	NA	NA	intronic	ENSG00000145191,ENSG00000161204	NA	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs2942056	0.37	0.37	0.352	0.375599	0.3131	0.5972	0.3386	0.2375	0.4243	0.3	0.62	0.33	0.24	0.3432	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.178205	NA	NA	NA	NA	NA	0.261	NA	3.3437
1318	20	8770282	8770282	G	A	intronic	PLCB1	NA	NA	NA	intronic	ENSG00000182621	NA	NA	NA	NA	NA	20p12.3	NA	NA	NA	NA	rs6039269	0.3	0.3	0.295	0.323682	0.327	0.3204	0.2363	0.3238	0.3855	0.3	0.31	0.29	0.29	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.87511	NA	NA	0.329353	0.325867	NA	0.348	NA	3.343647
1318	4	123113352	123113352	A	G	intronic	KIAA1109	NA	NA	NA	intronic	ENSG00000138688	NA	NA	NA	NA	NA	4q27	NA	NA	NA	NA	rs72687029	0.14	0.14	0.117	0.123802	0.2406	0.125	0.1297	0.0068	0.1564	0.24	0.13	0.14	0.01	0.2016	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.985839	1.985839	NA	0.214198	0.037181	NA	0.08	NA	3.343602
1318	10	27401056	27401056	C	T	intronic	YME1L1	NA	NA	NA	intronic	ENSG00000136758	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs11015538	0.34	0.34	0.333	0.347244	0.2247	0.5506	0.1873	0.3071	0.4315	0.23	0.6	0.19	0.3	0.2536	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.594473	NA	NA	0.178256	0.303904	NA	0.275	NA	3.343444
1318	17	72346855	72346855	T	C	exonic	KIF19	NA	synonymous SNV	KIF19:NM_153209:exon12:c.T1398C:p.H466H	exonic	ENSG00000196169	NA	synonymous SNV	ENSG00000196169:ENST00000551294:exon11:c.T1272C:p.H424H,ENSG00000196169:ENST00000389916:exon12:c.T1398C:p.H466H	NA	NA	17q25.1	NA	NA	NA	NA	rs11077744	0.62	0.62	0.598	0.602436	0.7843	0.7421	0.7493	0.1566	0.7699	0.77	0.72	0.73	0.18	0.743	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.371001	NA	NA	0.796279	0.250113	NA	0.587	NA	3.3430876
1318	12	43819298	43819298	G	A	intronic	ADAMTS20	NA	NA	NA	intronic	ENSG00000173157	NA	NA	NA	NA	NA	12q12	NA	Name=CTCF	NA	NA	rs10785430	0.63	0.63	0.629	0.661741	0.5298	0.8611	0.4553	0.6838	0.7086	0.52	0.87	0.45	0.63	0.5941	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.032687	NA	NA	0.533023	0.640263	NA	0.645	NA	3.343077
1318	12	109671701	109671701	C	T	intronic	ACACB	NA	NA	NA	intronic	ENSG00000076555	NA	NA	NA	NA	NA	12q24.11	NA	NA	NA	NA	rs7974040	0.17	0.17	0.184	0.145168	0.2445	0.0119	0.147	0.2118	0.089	0.25	0.01	0.16	0.24	0.1864	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.217978	NA	NA	0.226163	0.193827	NA	0.203	NA	3.342937
1318	19	10671664	10671664	T	C	intronic	KRI1	NA	NA	NA	intronic	ENSG00000129347	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs7259124	0.38	0.38	0.331	0.365216	0.17	0.7153	0.4841	0.2262	0.3088	0.17	0.74	0.43	0.24	0.2851	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.755093	NA	NA	0.201977	0.217204	NA	0.268	NA	3.342923
1318	3	54604188	54604188	T	C	intronic	CACNA2D3	NA	NA	NA	intronic	ENSG00000157445	NA	NA	NA	NA	NA	3p14.3	NA	NA	NA	NA	rs2251788	0.53	0.53	0.536	0.520567	0.6571	0.4534	0.5331	0.3986	0.6053	0.66	0.45	0.54	0.41	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.210962	NA	NA	NA	NA	ID=COSN166905;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.609	NA	3.3429
1318	3	125786695	125786695	G	A	intronic	SLC41A3	NA	NA	NA	intronic	ENSG00000114544	NA	NA	NA	NA	NA	3q21.2	NA	NA	NA	NA	rs4308225	0.65	0.65	0.636	0.647764	0.6571	0.6627	0.6816	0.5719	0.7014	0.66	0.65	0.68	0.59	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.990687	NA	NA	NA	NA	NA	0.681	NA	3.3429
1318	3	190341292	190341292	C	T	intronic	IL1RAP	NA	NA	NA	intronic	ENSG00000196083	NA	NA	NA	NA	NA	3q28	NA	NA	NA	NA	rs4687161	0.61	0.61	0.602	0.59345	0.6571	0.8125	0.5951	0.3086	0.6861	0.66	0.78	0.63	0.34	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.129751	NA	NA	NA	NA	NA	0.601	NA	3.3429
1318	3	197581147	197581147	A	G	intronic	LRCH3	NA	NA	NA	intronic	ENSG00000186001	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs9863587	0.59	0.59	0.579	0.619609	0.6571	0.496	0.5274	0.6747	0.6994	0.64	0.52	0.54	0.63	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.214848	NA	NA	NA	NA	ID=COSN167131;OCCURENCE=1(large_intestine)	0.551	NA	3.3429
1318	4	55599436	55599436	T	C	intronic	KIT	NA	NA	NA	intronic	ENSG00000157404	NA	NA	NA	NA	NA	4q12	NA	NA	NA	NA	rs1008658	0.55	0.55	0.527	0.504792	0.6571	0.6875	0.5692	0.2035	0.5215	0.65	0.68	0.57	0.21	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.725238	NA	NA	NA	NA	NA	0.478	NA	3.3429
1318	9	78819998	78819998	T	C	intronic	PCSK5	NA	NA	NA	intronic	ENSG00000099139	NA	NA	NA	NA	NA	9q21.13	NA	NA	NA	NA	rs10869732	0.69	0.69	0.658	0.672524	0.6571	0.756	0.7781	0.5461	0.6984	0.67	0.79	0.76	0.54	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.241698	1.241698	NA	NA	NA	NA	0.725	NA	3.3429
1318	10	15713507	15713507	A	G	intronic	ITGA8	NA	NA	NA	intronic	ENSG00000077943	NA	NA	NA	NA	NA	10p13	NA	NA	NA	NA	rs7100228	0.48	0.48	0.473	0.514976	0.6571	0.4196	0.4481	0.3192	0.7791	0.66	0.36	0.47	0.35	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.798597	NA	NA	NA	NA	NA	0.5	NA	3.3429
1318	10	48386110	48386110	T	C	intronic	RBP3	NA	NA	NA	intronic	ENSG00000107618	NA	NA	NA	NA	NA	10q11.22	NA	NA	NA	NA	rs2070706	0.62	0.62	0.59	0.597244	0.6571	0.6171	0.7248	0.4871	0.5736	0.65	0.62	0.69	0.52	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.90496	NA	NA	NA	NA	NA	0.659	NA	3.3429
1318	14	21955930	21955930	G	A	intronic	TOX4	NA	NA	NA	intronic	ENSG00000092203	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs1061031	0.65	0.65	0.656	0.65595	0.6571	0.7014	0.621	0.6604	0.6268	0.65	0.7	0.64	0.61	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.438952	NA	NA	NA	NA	NA	0.725	NA	3.3429
1318	16	66434571	66434571	G	C	intronic	CDH5	NA	NA	NA	intronic	ENSG00000179776	NA	NA	NA	NA	NA	16q21	NA	NA	NA	NA	rs6499082	0.71	0.71	0.698	0.693291	0.6571	0.8224	0.8069	0.6082	0.6319	0.66	0.84	0.76	0.61	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.585946	NA	NA	NA	NA	NA	0.594	NA	3.3429
1318	17	3631620	3631620	G	C	intronic	ITGAE	NA	NA	NA	intronic	ENSG00000083457	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs12943844	0.57	0.57	0.59	0.608626	0.6571	0.3442	0.4366	0.7617	0.7464	0.65	0.35	0.47	0.77	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.003871	NA	NA	NA	NA	NA	0.594	NA	3.3429
1318	9	78938236	78938236	G	A	intronic	PCSK5	NA	NA	NA	intronic	ENSG00000099139	NA	NA	NA	NA	NA	9q21.13	NA	NA	NA	NA	rs55762660	0.18	0.18	0.178	0.196486	0.2266	0.1022	0.1628	0.233	0.2372	0.23	0.08	0.17	0.23	0.2137	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.806915	NA	NA	0.216976	0.222032	NA	0.138	NA	3.342724
1318	3	111730591	111730591	G	T	intronic	TAGLN3	NA	NA	NA	intronic	ENSG00000144834	NA	NA	NA	NA	NA	3q13.2	NA	NA	Name=8	NA	rs3749311	0.43	0.43	0.426	0.399561	0.5746	0.3938	0.5317	0.1664	0.4468	0.57	0.42	0.53	0.16	0.5204	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.081255	NA	NA	0.562326	0.235815	NA	0.5	NA	3.342674
1318	1	150258838	150258838	C	G	intronic	C1orf51	NA	NA	NA	intronic	ENSG00000159208	NA	NA	NA	NA	NA	1q21.2	NA	Name=GATA3_(SC-268),FOXA1_(C-20)	NA	NA	rs1122967	0.72	0.72	0.724	0.747804	0.5497	0.7738	0.719	0.9667	0.6493	0.55	0.77	0.67	0.97	0.5977	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.173486	NA	NA	0.510116	0.883568	NA	0.703	NA	3.342484
1318	17	57886125	57886125	T	G	intronic	VMP1	NA	NA	NA	intronic	ENSG00000062716	NA	NA	NA	NA	NA	17q23.1	NA	NA	NA	NA	rs2645487	0.3	0.3	0.318	0.32528	0.1839	0.4563	0.1787	0.357	0.3967	0.19	0.47	0.2	0.36	0.2659	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.027175	NA	NA	0.207791	0.324251	ID=COSN165479;OCCURENCE=1(breast)	0.275	NA	3.342409
1318	11	7817512	7817512	G	T	downstream	OR5P2	NA	NA	NA	ncRNA_UTR3	ENSG00000183303	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs7931212	0.27	0.27	0.261	0.236621	0.2763	0.128	0.2911	0.3472	0.1196	0.29	0.15	0.28	0.37	0.2671	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.79955	NA	NA	0.281337	0.321785	NA	0.246	NA	3.3419296
1318	3	66293766	66293766	T	C	intronic	SLC25A26	NA	NA	NA	intronic	ENSG00000144741	NA	NA	NA	NA	NA	3p14.1	NA	NA	NA	NA	rs66918103	0.15	0.15	0.122	0.114816	0.2475	0.1052	0.1427	0.034	0.0777	0.25	0.1	0.15	0.05	0.1807	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.426526	NA	NA	0.229884	0.059918	NA	0.196	NA	3.341916
1318	1	145538664	145538664	A	G	intronic	ITGA10,NBPF10	NA	NA	NA	intronic	ENSG00000143127	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs1109216	0.6	0.6	0.6	0.585663	0.6581	0.4415	0.5922	0.7141	0.4816	0.64	0.44	0.62	0.72	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.152598	2.152598	NA	NA	NA	NA	0.565	NA	3.3419
1318	1	151747799	151747799	G	A	intronic	TDRKH	NA	NA	NA	intronic	ENSG00000182134	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs1781419	0.69	0.69	0.678	0.707268	0.6581	0.6954	0.6513	0.7284	0.7812	0.66	0.71	0.64	0.73	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.547686	NA	NA	NA	NA	NA	0.63	NA	3.3419
1318	1	155850558	155850558	T	C	intronic	SYT11	NA	NA	NA	intronic	ENSG00000132718	NA	NA	NA	NA	NA	1q22	NA	NA	NA	NA	rs822508	0.42	0.42	0.395	0.433906	0.6581	0.1845	0.6167	0.2209	0.6186	0.65	0.18	0.58	0.21	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.120637	NA	NA	NA	NA	NA	0.42	NA	3.3419
1318	1	155891045	155891045	A	C	intronic	KIAA0907	NA	NA	NA	intronic	ENSG00000132680	NA	NA	NA	NA	NA	1q22	NA	NA	NA	NA	rs625658	0.39	0.39	0.377	0.399561	0.6581	0.1786	0.5994	0.1369	0.5746	0.65	0.17	0.56	0.12	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.222496	NA	NA	NA	NA	NA	0.355	NA	3.3419
1318	4	79440425	79440425	T	C	intronic	FRAS1	NA	NA	NA	intronic	ENSG00000138759	NA	NA	NA	NA	NA	4q21.21	NA	NA	NA	NA	rs2903471	0.7	0.7	0.741	0.699681	0.6581	0.6815	0.5504	0.8283	0.6933	0.66	0.71	0.56	0.86	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.657355	NA	NA	NA	NA	NA	0.71	NA	3.3419
1318	19	7682112	7682112	A	C	intronic	CAMSAP3	NA	NA	NA	intronic	ENSG00000076826	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs794077	0.75	0.75	0.75	0.738419	0.6581	0.8095	0.6888	0.9017	0.5624	0.66	0.82	0.64	0.88	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.578396	NA	NA	NA	NA	NA	0.841	NA	3.3419
1318	19	19021970	19021970	T	C	intronic	COPE	NA	NA	NA	intronic	ENSG00000105669,ENSG00000268193	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs1468461	0.62	0.62	0.634	0.613219	0.6581	0.2679	0.7435	0.8964	0.4479	0.65	0.29	0.77	0.87	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.16667	NA	NA	NA	NA	NA	0.623	NA	3.3419
1318	2	202245953	202245953	A	G	intronic	TRAK2	NA	NA	NA	intronic	ENSG00000115993	NA	NA	NA	NA	NA	2q33.1	NA	NA	NA	NA	rs3731710	NA	NA	NA	0.458067	0.6581	0.4871	0.5072	0.2738	0.4366	NA	NA	NA	NA	0.0000178	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.171859	NA	NA	NA	NA	NA	NA	NA	3.3418822
1318	12	48380682	48380682	G	A	intronic	COL2A1	NA	NA	NA	intronic	ENSG00000139219	NA	NA	NA	NA	NA	12q13.11	NA	NA	NA	NA	rs10875714	0.21	0.21	0.198	0.203674	0.2366	0.2629	0.1902	0.1611	0.1759	0.22	0.25	0.22	0.14	0.196	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.535241	NA	NA	0.226047	0.171811	NA	0.188	NA	3.341353
1318	5	148562981	148562981	C	A	intronic	ABLIM3	NA	NA	NA	ncRNA_intronic	ENSG00000248647	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs6887628	0.33	0.33	0.32	0.342452	0.3171	0.5208	0.281	0.2368	0.3712	0.3	0.49	0.29	0.22	0.3407	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.176276	NA	NA	0.334302	0.252383	NA	0.341	NA	3.3412313
1318	17	73723239	73723239	G	A	intronic	ITGB4	NA	NA	NA	intronic	ENSG00000132470	NA	NA	NA	NA	NA	17q25.1	NA	NA	Name=2	NA	rs2584100	0.41	0.41	0.403	0.399361	0.5706	0.494	0.464	0.0809	0.5102	0.56	0.44	0.48	0.1	0.5185	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.3732	NA	NA	0.569884	0.15842	NA	0.5	NA	3.341016
1318	1	109366370	109366370	C	T	intronic	AKNAD1	NA	NA	NA	intronic	ENSG00000162641	NA	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	rs7522260	0.49	0.49	0.486	0.472045	0.659	0.3562	0.513	0.3192	0.5767	0.66	0.38	0.53	0.34	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.405539	NA	NA	NA	NA	NA	0.558	NA	3.341
1318	1	145535611	145535611	T	G	intronic	ITGA10,NBPF10	NA	NA	NA	intronic	ENSG00000143127	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs4970851	0.6	0.6	0.589	0.586462	0.659	0.4454	0.5922	0.7141	0.4806	0.64	0.45	0.62	0.72	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.046973	NA	NA	NA	NA	NA	0.565	NA	3.341
1318	3	53003021	53003021	G	C	intronic	SFMBT1	NA	NA	NA	intronic	ENSG00000163935	NA	NA	NA	NA	NA	3p21.1	NA	NA	NA	NA	rs2245424	0.54	0.54	0.529	0.51877	0.659	0.6002	0.4914	0.3275	0.5685	0.65	0.56	0.49	0.38	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.115975	NA	NA	NA	NA	NA	0.543	NA	3.341
1318	7	137732209	137732209	A	C	intergenic	CREB3L2,AKR1D1	dist=45362;dist=28969	NA	NA	ncRNA_exonic	ENSG00000231923	NA	NA	NA	NA	NA	7q33	NA	NA	NA	NA	rs998767	0.62	0.62	0.642	0.650759	0.659	0.4802	0.5432	0.7973	0.6963	0.67	0.44	0.55	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.43154	NA	NA	NA	NA	NA	0.551	NA	3.341
1318	11	94704037	94704037	C	G	intronic	CWC15	NA	NA	NA	intronic	ENSG00000150316	NA	NA	NA	NA	NA	11q21	NA	NA	NA	NA	rs3737505	0.51	0.51	0.523	0.511182	0.659	0.2688	0.5144	0.5862	0.5051	0.65	0.29	0.54	0.53	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.174641	NA	NA	NA	NA	NA	0.674	NA	3.341
1318	15	84858253	84858253	A	G	intergenic	LOC100505679,LOC440300	dist=7268;dist=2347	NA	NA	ncRNA_exonic	ENSG00000259726	NA	NA	NA	NA	NA	15q25.2	NA	NA	NA	NA	rs435029	0.74	0.74	0.721	0.769768	0.659	0.6667	0.7709	0.9372	0.7628	0.65	0.67	0.75	0.94	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.335909	NA	NA	NA	NA	NA	NA	NA	3.341
1318	19	10106671	10106671	C	G	intronic	COL5A3	NA	NA	NA	intronic	ENSG00000080573	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs3745592	0.39	0.39	0.386	0.389776	0.3231	0.3978	0.3617	0.5023	0.318	0.31	0.41	0.38	0.51	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.153729	NA	NA	0.335952	0.503613	NA	0.355	NA	3.340948
1318	3	54419977	54419977	C	T	intronic	CACNA2D3	NA	NA	NA	intronic	ENSG00000157445	NA	NA	NA	NA	NA	3p14.3	NA	NA	NA	NA	rs9836159	0.22	0.22	0.209	0.21905	0.2177	0.1835	0.3069	0.2247	0.1871	0.22	0.17	0.29	0.21	0.2387	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.298744	NA	NA	0.202764	0.22394	NA	0.232	NA	3.340836
1318	18	61620766	61620766	G	A	intronic	HMSD	NA	NA	NA	intronic	ENSG00000221887	NA	NA	NA	NA	NA	18q22.1	NA	NA	NA	NA	rs9945924	0.27	0.27	0.286	0.281949	0.2177	0.2589	0.2896	0.41	0.1933	0.2	0.21	0.28	0.42	0.2367	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.119929	NA	NA	0.204774	0.389668	ID=COSM148439;OCCURENCE=1(stomach)	0.304	NA	3.340826
1318	16	20627876	20627876	A	G	intergenic	ACSM2B,ACSM1	dist=40181;dist=6683	NA	NA	intronic	ENSG00000005187	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs7195927	0.58	0.58	0.608	0.605631	0.326	0.8532	0.3372	0.7821	0.59	0.34	0.88	0.36	0.75	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.949558	NA	NA	NA	NA	NA	0.565	NA	3.3406667
1318	8	142176280	142176280	G	A	intronic	DENND3	NA	NA	NA	intronic	ENSG00000105339	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs2241735	0.21	0.21	0.205	0.205471	0.2485	0.1954	0.1686	0.1876	0.2219	0.25	0.2	0.17	0.19	0.2048	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.993432	NA	NA	0.206047	0.199274	ID=COSM150555;OCCURENCE=1(stomach)	0.116	NA	3.340653
1318	1	15770101	15770101	C	A	intronic	CTRC	NA	NA	NA	intronic	ENSG00000162438	NA	NA	NA	NA	NA	1p36.21	NA	NA	NA	NA	rs10803384	0.19	0.19	0.173	0.171326	0.2276	0.0605	0.2161	0.2292	0.1176	0.23	0.08	0.22	0.23	0.1992	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.707091	NA	NA	0.232558	0.221516	NA	0.138	NA	3.340642
1318	1	33741787	33741787	G	A	intronic	ZNF362	NA	NA	NA	intronic	ENSG00000160094	NA	NA	NA	NA	NA	1p35.1	NA	NA	NA	NA	rs12743549	0.17	0.17	0.152	0.166733	0.2247	0.2143	0.17	0.0113	0.2658	0.22	0.22	0.16	0.02	0.2034	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.231949	NA	NA	0.231279	0.046754	NA	0.13	NA	3.340621
1318	1	38272660	38272660	G	A	intronic	YRDC	NA	NA	NA	UTR5	ENSG00000197982	ENST00000373043:c.-1697G>A	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	rs2291297	0.23	0.23	0.216	0.204673	0.2783	0.2639	0.2089	0.0416	0.2853	0.3	0.29	0.21	0.07	0.2609	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.447021	NA	NA	0.287093	0.083522	NA	0.138	NA	3.3403737
1318	15	82444437	82444437	A	G	exonic	EFTUD1	NA	synonymous SNV	EFTUD1:NM_001040610:exon16:c.T2205C:p.G735G,EFTUD1:NM_024580:exon18:c.T2358C:p.G786G	exonic	ENSG00000140598	NA	synonymous SNV	ENSG00000140598:ENST00000359445:exon16:c.T2205C:p.G735G,ENSG00000140598:ENST00000268206:exon18:c.T2358C:p.G786G	NA	NA	15q25.2	NA	NA	NA	NA	rs905450	0.82	0.82	0.815	0.785543	0.7624	0.8353	0.853	0.8714	0.5941	0.75	0.83	0.83	0.9	0.7775	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.531709	NA	NA	0.786602	0.8531	NA	0.812	NA	3.3401646
1318	19	580333	580333	G	A	intronic	BSG	NA	NA	NA	intronic	ENSG00000172270	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs11879069	0.3	0.3	0.283	0.326478	0.1889	0.4563	0.2867	0.3275	0.3609	0.18	0.46	0.26	0.31	0.2568	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.085124	NA	NA	0.214286	0.293182	NA	0.297	NA	3.340014
1318	1	67487119	67487119	C	A	intronic	SLC35D1	NA	NA	NA	intronic	ENSG00000116704	NA	NA	NA	NA	NA	1p31.3	NA	NA	NA	NA	rs2065002	0.65	0.65	0.591	0.632188	0.66	0.8413	0.732	0.2776	0.7965	0.65	0.85	0.75	0.33	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.148869	NA	NA	NA	NA	NA	0.572	NA	3.34
1318	2	160993800	160993800	A	T	intronic	ITGB6	NA	NA	NA	intronic	ENSG00000115221	NA	NA	NA	NA	NA	2q24.2	NA	NA	NA	NA	rs35720878	0.62	0.62	0.583	0.59365	0.66	0.498	0.755	0.6248	0.4673	0.66	0.49	0.73	0.61	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.359156	NA	NA	NA	NA	NA	0.601	NA	3.34
1318	8	39525829	39525829	A	C	intronic	ADAM18	NA	NA	NA	intronic	ENSG00000168619	NA	NA	NA	NA	NA	8p11.22	NA	NA	NA	NA	rs2305393	0.4	0.4	0.369	0.361422	0.66	0.1438	0.5634	0.1589	0.409	0.67	0.14	0.57	0.17	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.104954	NA	NA	NA	NA	NA	0.413	NA	3.34
1318	18	196829	196829	G	A	intronic	USP14	NA	NA	NA	intronic	ENSG00000101557	NA	NA	NA	NA	NA	18p11.32	NA	NA	NA	NA	rs655781	0.65	0.65	0.653	0.686901	0.66	0.5268	0.7723	0.6823	0.8252	0.66	0.56	0.75	0.68	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.14447	NA	NA	NA	NA	NA	0.725	NA	3.34
1318	10	103281634	103281634	C	G	intronic	BTRC	NA	NA	NA	intronic	ENSG00000166167	NA	NA	NA	NA	NA	10q24.32	NA	NA	NA	NA	rs6584429	0.4	0.4	0.414	0.415535	0.2097	0.6171	0.2421	0.6172	0.2699	0.21	0.62	0.23	0.57	0.2639	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.942919	NA	NA	0.18686	0.537449	NA	0.391	NA	3.33954
1318	19	49950413	49950413	C	G	intronic	PIH1D1	NA	NA	NA	intronic	ENSG00000104872	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs2335090	0.28	0.28	0.288	0.255791	0.3221	0.005	0.232	0.5257	0.0982	0.32	0.01	0.25	0.55	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.294919	NA	NA	0.338781	0.499277	NA	0.355	NA	3.339119
1318	19	41628677	41628677	T	G	intronic	CYP2F1	NA	NA	NA	intronic	ENSG00000197446	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs305975	0.23	0.23	0.212	0.245208	0.2107	0.2272	0.2291	0.2708	0.2761	0.22	0.21	0.23	0.27	0.2359	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.434685	NA	NA	0.214302	0.260327	NA	0.261	NA	3.339098
1318	4	110800372	110800372	G	A	intergenic	LRIT3,EGF	dist=6901;dist=33668	NA	NA	ncRNA_exonic	ENSG00000249681	NA	NA	NA	NA	NA	4q25	NA	NA	NA	NA	rs6533471	0.56	0.56	0.577	0.525958	0.661	0.4504	0.4323	0.5794	0.4591	0.66	0.47	0.5	0.55	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.496976	NA	NA	NA	NA	NA	0.464	NA	3.339
1318	4	110800432	110800432	G	C	intergenic	LRIT3,EGF	dist=6961;dist=33608	NA	NA	ncRNA_exonic	ENSG00000249681	NA	NA	NA	NA	NA	4q25	NA	NA	NA	NA	rs6533472	0.56	0.56	0.572	0.525958	0.661	0.4504	0.4323	0.5794	0.4591	0.66	0.47	0.5	0.55	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.311643	NA	NA	NA	NA	NA	0.464	NA	3.339
1318	5	95278679	95278679	G	A	intronic	ELL2	NA	NA	NA	intronic	ENSG00000118985	NA	NA	NA	NA	NA	5q15	NA	NA	NA	NA	rs3734131	0.31	0.31	0.331	0.313698	0.2217	0.3919	0.2147	0.4365	0.2321	0.23	0.39	0.19	0.43	0.2389	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.111842	NA	NA	0.200465	0.399228	NA	0.399	NA	3.338935
1318	9	137660194	137660194	G	T	intronic	COL5A1	NA	NA	NA	intronic	ENSG00000130635	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs4842162	0.45	0.45	0.455	0.455671	0.3151	0.7083	0.3862	0.4266	0.4284	0.31	0.7	0.38	0.43	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.991527	NA	NA	0.346009	0.45448	NA	0.42	NA	3.338891
1318	15	38631930	38631930	C	A	intronic	SPRED1	NA	NA	NA	intronic	ENSG00000166068	NA	NA	NA	NA	NA	15q14	Score=817;Name=V$FOXO4_02	NA	NA	NA	rs7180446	0.82	0.82	0.832	0.799321	0.9006	0.8026	0.8401	0.649	0.8661	0.92	0.8	0.82	0.71	0.8637	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.401433	1.401433	NA	0.896905	0.685909	NA	0.848	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000041243.2;CLNDSDB=.;CLNDSDBID=.	3.338795
1318	15	21938182	21938182	A	G	ncRNA_exonic	LOC646214	NA	NA	NA	upstream	ENSG00000237161	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs2343904	0.84	0.84	0.863	0.855232	0.828	0.8065	0.8963	0.9342	0.7975	0.79	0.79	0.88	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.364446	NA	NA	NA	NA	NA	0.942	NA	3.3386666
1318	2	98355990	98355990	G	A	UTR3	ZAP70	NM_001079:c.*29G>A,NM_207519:c.*29G>A	NA	NA	UTR3	ENSG00000115085	ENST00000264972:c.*29G>A,ENST00000442208:c.*29G>A	NA	NA	NA	NA	2q11.2	NA	NA	NA	NA	rs11678558	0.19	0.19	0.136	0.148562	0.3628	0.0099	0.2075	0.087	0.1125	0.38	0.01	0.22	0.08	0.2916	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.531465	NA	NA	0.340284	0.126136	NA	0.167	NA	3.3386494
1318	2	234372767	234372767	T	C	intronic	DGKD	NA	NA	NA	intronic	ENSG00000077044	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs2924811	0.25	0.25	0.244	0.262979	0.2435	0.1419	0.1585	0.5333	0.1166	0.23	0.12	0.16	0.51	0.2105	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.691406	NA	NA	0.207606	0.455227	NA	0.203	NA	3.338394
1318	1	30699340	30699340	T	G	intergenic	PTPRU,MATN1	dist=1046015;dist=484784	NA	NA	upstream	ENSG00000231251	NA	NA	NA	NA	NA	1p35.2	NA	NA	NA	NA	rs6684063	0.5	0.5	0.502	0.497204	0.162	0.7312	0.5072	0.7035	0.3149	0.18	0.75	0.44	0.73	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.344957	NA	NA	NA	NA	NA	0.384	NA	3.338
1318	9	112918531	112918531	A	G	intronic	AKAP2,PALM2-AKAP2	NA	NA	NA	intronic	ENSG00000157654,ENSG00000241978	NA	NA	NA	NA	NA	9q31.3	NA	NA	NA	NA	rs10759392	0.75	0.75	0.75	0.735024	0.662	0.9643	0.7147	0.6271	0.7342	0.68	0.96	0.67	0.68	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.450389	NA	NA	NA	NA	NA	0.826	NA	3.338
1318	16	8558053	8558053	G	A	intergenic	RBFOX1,TMEM114	dist=794713;dist=61449	NA	NA	upstream	ENSG00000260379	NA	NA	NA	NA	NA	16p13.2	NA	NA	NA	NA	rs77048110	0.09	0.09	0.078	0.0662939	0.162	0.002	0.1225	0.0325	0.0399	0.16	NA	0.13	0.04	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.908753	NA	NA	NA	NA	NA	0.058	NA	3.338
1318	16	81146190	81146190	G	A	intronic	PKD1L2	NA	NA	NA	intronic	ENSG00000166473	NA	NA	NA	NA	NA	16q23.2	NA	NA	NA	NA	rs11642587	NA	NA	NA	0.631589	0.662	0.6915	0.7118	0.5628	0.5746	NA	NA	NA	NA	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.419548	NA	NA	NA	NA	NA	0.159	NA	3.338
1318	19	3448869	3448869	A	G	intronic	NFIC	NA	NA	NA	intronic	ENSG00000141905	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs4807473	0.39	0.39	0.383	0.343051	0.662	0.2202	0.4813	0.0855	0.3916	0.64	0.21	0.52	0.11	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.591835	NA	NA	NA	NA	NA	0.464	NA	3.338
1318	21	40900795	40900795	T	C	intergenic	SH3BGR,C21orf88	dist=13362;dist=68280	NA	NA	ncRNA_exonic	ENSG00000235012	NA	NA	NA	NA	NA	21q22.2	NA	NA	NA	NA	rs645495	0.6	0.6	0.563	0.590256	0.662	0.7649	0.6744	0.3124	0.6524	0.66	0.74	0.68	0.29	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.208927	2.208927	NA	NA	NA	NA	0.616	NA	3.338
1318	19	23405580	23405580	T	C	intergenic	ZNF730,ZNF724P	dist=75566;dist=1027	NA	NA	exonic	ENSG00000196081	NA	synonymous SNV	ENSG00000196081:ENST00000418100:exon4:c.A1467G:p.L489L	NA	NA	19p12	NA	NA	NA	NA	rs10412126	0.53	0.53	0.492	0.50639	0.6014	0.6627	0.6398	0.1982	0.5695	0.62	0.66	0.59	0.21	0.5607	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.224753	NA	NA	NA	NA	ID=COSM1524979,COSM1524980;OCCURENCE=1(lung)	0.391	NA	3.3379
1318	10	37505099	37505099	C	A	intronic	ANKRD30A	NA	NA	NA	intronic	ENSG00000148513	NA	NA	NA	NA	NA	10p11.21	NA	NA	NA	NA	rs34285151	0.24	0.24	0.248	0.230431	0.2227	0.1558	0.1571	0.4244	0.1053	0.22	0.14	0.2	0.4	0.2099	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.703117	NA	NA	0.22952	0.393177	NA	0.268	NA	3.33788
1318	6	18463633	18463633	C	T	intronic	RNF144B	NA	NA	NA	intronic	ENSG00000137393	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs9371061	0.24	0.24	0.239	0.229233	0.2177	0.1677	0.2046	0.354	0.1534	0.22	0.18	0.2	0.38	0.2268	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.631693	NA	NA	0.218023	0.329551	NA	0.297	NA	3.337477
1318	2	175629021	175629021	C	A	intronic	CHRNA1	NA	NA	NA	ncRNA_intronic	ENSG00000236449	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	rs7560774	0.34	0.34	0.303	0.280751	0.5239	0.2163	0.4856	0.0635	0.2454	0.52	0.23	0.49	0.07	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.569252	NA	NA	0.47203	0.117052	NA	0.333	NA	3.3374033
1318	9	137660375	137660375	A	G	intronic	COL5A1	NA	NA	NA	intronic	ENSG00000130635	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs10776900	0.45	0.45	0.424	0.453874	0.3161	0.7083	0.3876	0.4183	0.4284	0.31	0.7	0.38	0.43	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.30111	NA	NA	0.346637	0.446532	NA	0.413	NA	3.337263
1318	18	11609903	11609903	C	G	intergenic	PIEZO2,GNAL	dist=461142;dist=79111	NA	NA	ncRNA_exonic	ENSG00000236396	NA	NA	NA	Score=536;Name=lod=202	NA	18p11.21	NA	NA	NA	NA	rs8087561	0.73	0.73	0.776	0.853834	0.8221	0.879	0.8703	0.8283	0.8834	0.68	0.79	0.78	0.7	0.8407	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.356011	NA	NA	NA	NA	NA	NA	NA	3.3372
1318	1	15860803	15860803	C	T	intronic	DNAJC16	NA	NA	NA	intronic	ENSG00000116138	NA	NA	NA	NA	NA	1p36.21	NA	NA	NA	NA	rs11583306	0.23	0.23	0.24	0.229832	0.2167	0.0466	0.1873	0.4289	0.1933	0.22	0.05	0.24	0.44	0.2224	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.174937	NA	NA	0.223721	0.415797	NA	0.21	NA	3.337179
1318	1	167042590	167042590	C	T	intronic	GPA33	NA	NA	NA	intronic	ENSG00000143167	NA	NA	NA	NA	NA	1q24.1	NA	NA	NA	NA	rs12139875	0.15	0.15	0.151	0.139577	0.2435	NA	0.1398	0.1974	0.0982	0.23	NA	0.15	0.2	0.1919	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.584346	NA	NA	0.227558	0.185883	NA	0.145	NA	3.337042
1318	2	27505782	27505782	C	T	intronic	TRIM54	NA	NA	NA	intronic	ENSG00000138100	NA	NA	NA	NA	NA	2p23.3	NA	NA	NA	NA	rs62130709	0.23	0.23	0.215	0.260184	0.2028	0.1577	0.3602	0.2648	0.3476	0.22	0.13	0.31	0.3	0.2531	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.113329	NA	NA	0.207093	0.237177	NA	0.261	NA	3.337007
1318	1	231486989	231486989	A	C	intronic	SPRTN	NA	NA	NA	intronic	ENSG00000010072	NA	NA	NA	NA	NA	1q42.2	NA	NA	NA	NA	rs2474633	0.59	0.59	0.544	0.562101	0.663	0.5308	0.5259	0.5212	0.5716	0.68	0.55	0.57	0.49	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.369226	NA	NA	NA	NA	NA	0.275	NA	3.337
1318	2	202575907	202575907	A	G	intronic	ALS2	NA	NA	NA	intronic	ENSG00000003393	NA	NA	NA	NA	NA	2q33.1	NA	NA	NA	NA	rs2882231	0.55	0.55	0.537	0.50619	0.663	0.3492	0.7291	0.4448	0.4315	0.65	0.38	0.73	0.46	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.500349	1.500349	NA	NA	NA	NA	0.601	NA	3.337
1318	10	1126293	1126293	T	C	intronic	WDR37	NA	NA	NA	intronic	ENSG00000047056	NA	NA	NA	NA	NA	10p15.3	NA	NA	NA	NA	rs7087381	0.39	0.39	0.39	0.422324	0.3181	0.4444	0.4265	0.4932	0.408	0.33	0.39	0.39	0.48	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.820545	NA	NA	0.345066	0.489884	NA	0.391	NA	3.336834
1318	16	88958282	88958282	C	G	intronic	CBFA2T3	NA	NA	NA	intronic	ENSG00000129993	NA	NA	NA	NA	NA	16q24.3	NA	NA	NA	NA	rs3743541	0.36	0.36	0.351	0.38119	0.2177	0.4891	0.304	0.6256	0.1626	0.2	0.47	0.24	0.55	0.2566	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.240868	NA	NA	0.188997	0.574066	NA	0.29	NA	3.336703
1318	6	11306153	11306153	C	T	intronic	NEDD9	NA	NA	NA	intronic	ENSG00000111859	NA	NA	NA	NA	NA	6p24.2	NA	NA	NA	NA	rs16871236	0.41	0.41	0.409	0.426518	0.341	0.6746	0.3948	0.3011	0.4509	0.33	0.66	0.36	0.29	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.019702	NA	NA	0.322753	0.289017	NA	0.319	NA	3.336247
1318	19	17835831	17835831	T	G	intronic	MAP1S	NA	NA	NA	intronic	ENSG00000130479	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs3761055	0.24	0.24	0.245	0.253195	0.2386	0.0169	0.232	0.5318	0.1503	0.23	0.01	0.24	0.53	0.2159	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.670863	NA	NA	0.209419	0.476396	NA	0.304	NA	3.336081
1318	12	129500352	129500352	G	A	intergenic	GLT1D1,TMEM132D	dist=30843;dist=55919	NA	NA	ncRNA_exonic	ENSG00000256581	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs540912	0.75	0.75	0.736	0.767173	0.664	0.8899	0.7695	0.7504	0.7679	0.67	0.9	0.74	0.73	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.414952	NA	NA	NA	NA	NA	0.63	NA	3.336
1318	12	129501057	129501057	G	T	intergenic	GLT1D1,TMEM132D	dist=31548;dist=55214	NA	NA	ncRNA_exonic	ENSG00000256581	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs491872	0.75	0.75	0.742	0.767173	0.664	0.8899	0.7695	0.7504	0.7679	0.67	0.9	0.74	0.73	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.689108	NA	NA	NA	NA	NA	0.63	NA	3.336
1318	2	44570776	44570776	C	T	intronic	PREPL	NA	NA	NA	intronic	ENSG00000138078	NA	NA	NA	NA	NA	2p21	NA	NA	NA	NA	rs17580226	0.59	0.59	0.622	0.615016	0.664	0.3115	0.6196	0.7632	0.6738	0.65	0.34	0.65	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.252453	NA	NA	NA	NA	NA	0.659	NA	3.336
1318	2	44570804	44570804	C	A	intronic	PREPL	NA	NA	NA	intronic	ENSG00000138078	NA	NA	NA	NA	NA	2p21	NA	NA	NA	NA	rs12053381	0.57	0.57	0.59	0.588059	0.664	0.3125	0.6095	0.6657	0.6738	0.65	0.34	0.64	0.68	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.344674	NA	NA	NA	NA	NA	0.63	NA	3.336
1318	12	123812629	123812629	G	C	intronic	SBNO1	NA	NA	NA	intronic	ENSG00000139697	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs28419092	0.53	0.53	0.488	0.493411	0.664	0.7004	0.5836	0.0567	0.6309	0.67	0.7	0.59	0.08	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.076658	NA	NA	NA	NA	NA	0.42	NA	3.336
1318	15	76085273	76085273	G	T	intergenic	MIR4313,UBE2Q2	dist=30617;dist=50349	NA	NA	upstream	ENSG00000261820	NA	NA	NA	NA	NA	15q24.2	NA	NA	NA	NA	rs34821913	0.24	0.24	0.232	0.265375	0.164	0.4544	0.1542	0.1339	0.4315	0.16	0.46	0.18	0.14	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.969695	NA	NA	NA	NA	NA	0.254	NA	3.336
1318	5	179729625	179729625	A	G	intronic	GFPT2	NA	NA	NA	intronic	ENSG00000131459	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs2303005	0.29	0.29	0.254	0.286142	0.2256	0.4653	0.2925	0.1921	0.2863	0.24	0.44	0.29	0.18	0.2409	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.464196	NA	NA	0.19768	0.20357	NA	0.225	NA	3.33582
1318	7	21920556	21920556	G	A	intronic	DNAH11	NA	NA	NA	intronic	ENSG00000105877	NA	NA	NA	NA	NA	7p15.3	NA	NA	NA	NA	rs62445884	0.13	0.13	0.11	0.131989	0.2416	0.0903	0.1671	0.0477	0.1513	0.23	0.05	0.17	0.05	0.1944	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.321216	NA	NA	0.228186	0.073304	NA	0.094	NA	3.335814
1318	1	109482220	109482220	C	T	intronic	CLCC1	NA	NA	NA	intronic	ENSG00000121940,ENSG00000162641	NA	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	rs338480	0.2	0.2	0.19	0.191893	0.2157	0.0337	0.1585	0.3101	0.1943	0.23	0.03	0.19	0.34	0.233	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.776101	NA	NA	0.215515	0.274172	NA	0.138	NA	3.335785
1318	10	104184213	104184213	G	A	intronic	CUEDC2	NA	NA	NA	intronic	ENSG00000107874	NA	NA	NA	NA	NA	10q24.32	NA	NA	NA	NA	rs41287462	0.16	0.16	0.139	0.197284	0.2097	0.0923	0.2695	0.1097	0.3599	0.2	0.09	0.26	0.11	0.2361	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.324538	NA	NA	0.218465	0.113614	NA	0.203	NA	3.335735
1318	14	92102759	92102759	A	G	intronic	CATSPERB	NA	NA	NA	intronic	ENSG00000133962	NA	NA	NA	NA	NA	14q32.12	NA	NA	NA	NA	rs17127484	0.23	0.23	0.252	0.228035	0.2386	0.244	0.1657	0.3132	0.1299	0.24	0.25	0.18	0.25	0.2087	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.376692	NA	NA	0.216977	0.278257	NA	0.312	NA	3.335723
1318	5	76878139	76878139	T	C	intergenic	WDR41,OTP	dist=89807;dist=46398	NA	NA	intronic	ENSG00000164253	NA	NA	NA	NA	NA	5q13.3	NA	NA	NA	NA	rs13176191	0.29	0.29	0.295	0.277756	0.331	0.2093	0.3213	0.27	0.273	0.33	0.24	0.35	0.26	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.562126	NA	NA	NA	NA	NA	0.261	NA	3.3356667
1318	6	135524516	135524516	A	G	intronic	MYB	NA	NA	NA	UTR3	ENSG00000118513	ENST00000527615:c.*24A>G	NA	NA	NA	NA	6q23.3	NA	NA	NA	NA	rs9385719	0.45	0.45	NA	0.474441	0.4115	0.4325	0.4539	0.6044	0.4213	0.41	0.41	0.44	0.57	0.4197	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.382224	1.382224	NA	NA	NA	NA	0.471	NA	3.3354667
1318	12	52981676	52981676	A	C	intronic	KRT72	NA	NA	NA	intronic	ENSG00000170486	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs7310156	0.17	0.17	0.145	0.142372	0.2465	0.1349	0.1455	0.1127	0.0808	0.24	0.12	0.16	0.11	0.1926	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.306279	2.306279	NA	0.225465	0.13562	NA	0.225	NA	3.335435
1318	11	56507812	56507812	A	G	intronic	OR8U8	NA	NA	NA	ncRNA_exonic	ENSG00000181325	NA	NA	NA	NA	NA	11q12.1	NA	NA	NA	NA	rs473032	NA	NA	0.914	0.987021	0.998	1	1	0.9539	0.998	NA	NA	NA	NA	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.340699	NA	NA	NA	NA	NA	0.986	NA	3.3353333
1318	16	84255809	84255809	T	C	UTR3	KCNG4	NM_172347:c.*14A>G	NA	NA	downstream	ENSG00000168418	NA	NA	NA	NA	NA	16q24.1	NA	NA	NA	NA	rs56796255	0.16	0.16	0.142	0.162141	0.2276	0.0446	0.1671	0.1762	0.1933	0.24	0.04	0.17	0.17	0.2098	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.32282	NA	NA	0.227558	0.182273	NA	0.312	NA	3.335042
1318	1	22333595	22333595	G	A	intronic	CELA3A	NA	NA	NA	intronic	ENSG00000142789	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs3820290	0.24	0.24	0.183	0.405751	0.665	0.2907	0.3545	0.2239	0.5399	0.43	0.07	0.28	0.12	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.783058	NA	NA	NA	NA	NA	0.21	NA	3.335
1318	5	59940502	59940502	A	T	intronic	DEPDC1B	NA	NA	NA	intronic	ENSG00000035499	NA	NA	NA	NA	NA	5q12.1	NA	NA	NA	NA	rs6877561	0.73	0.73	0.746	0.69369	0.665	0.5913	0.6772	0.9614	0.4785	0.68	0.63	0.67	0.96	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.288876	NA	NA	NA	NA	NA	0.775	NA	3.335
1318	7	44550545	44550545	C	G	intergenic	NUDCD3,NPC1L1	dist=20160;dist=1590	NA	NA	downstream	ENSG00000225443	NA	NA	NA	NA	NA	7p13	NA	NA	NA	NA	rs56314549	0.08	0.08	0.058	0.071885	0.165	0.005	0.0821	0.0174	0.1115	0.16	0.01	0.1	0.01	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.092835	NA	NA	NA	NA	NA	0.051	NA	3.335
1319	2	141473505	141473505	A	T	intronic	LRP1B	NA	NA	NA	intronic	ENSG00000168702	NA	NA	NA	NA	NA	2q22.1	NA	Name=MafK_(ab50322)	NA	NA	rs4954852	0.45	0.45	0.419	0.419728	0.5805	0.377	0.428	0.348	0.3896	0.57	0.4	0.46	0.32	0.5058	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.492947	NA	NA	0.579223	0.392192	NA	0.406	NA	3.334477
1319	15	93555717	93555717	A	G	intronic	CHD2	NA	NA	NA	intronic	ENSG00000173575	NA	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs2119010	0.15	0.15	0.149	0.116813	0.2366	0.0962	0.1859	0.0454	0.0624	0.22	0.11	0.19	0.06	0.1812	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.033186	NA	NA	0.247844	0.079199	NA	0.232	NA	3.334356
1319	6	69772817	69772817	C	G	intronic	BAI3	NA	NA	NA	intronic	ENSG00000135298	NA	NA	NA	Score=579;Name=lod=300	NA	6q12	NA	NA	NA	NA	rs2793459	0.6	0.6	0.547	0.595447	0.5388	0.9653	0.7061	0.2209	0.7004	0.54	0.97	0.66	0.24	0.5895	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.011758	3.011758	NA	0.537674	0.263958	NA	0.551	NA	3.334026
1319	1	31440921	31440921	G	A	intronic	PUM1	NA	NA	NA	intronic	ENSG00000134644	NA	NA	NA	NA	NA	1p35.2	NA	NA	NA	NA	rs4317854	0.79	0.79	0.806	0.83127	0.666	0.869	0.6715	0.9523	0.9121	0.68	0.87	0.68	0.95	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.313662	NA	NA	NA	NA	NA	0.877	NA	3.334
1319	1	55336950	55336950	C	G	intronic	DHCR24	NA	NA	NA	intronic	ENSG00000116133	NA	NA	NA	NA	NA	1p32.3	NA	NA	NA	NA	rs608458	0.55	0.55	0.531	0.578674	0.666	0.373	0.5144	0.5204	0.8252	0.69	0.39	0.56	0.53	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.053879	NA	NA	NA	NA	NA	0.703	NA	3.334
1319	5	23305275	23305275	T	C	intergenic	CDH12,PRDM9	dist=451544;dist=202449	NA	NA	upstream	ENSG00000250332	NA	NA	NA	NA	NA	5p14.2	NA	NA	NA	NA	rs6879795	0.15	0.15	0.144	0.222045	0.166	0.125	0.2205	0.1967	0.4151	0.14	0.11	0.2	0.18	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.552204	NA	NA	NA	NA	NA	0.145	NA	3.334
1319	5	23305303	23305303	A	G	intergenic	CDH12,PRDM9	dist=451572;dist=202421	NA	NA	upstream	ENSG00000250332	NA	NA	NA	NA	NA	5p14.2	NA	NA	NA	NA	rs6875447	0.14	0.14	0.131	0.210663	0.166	0.125	0.2161	0.1558	0.4151	0.14	0.11	0.19	0.14	NA	0.19	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.588648	NA	NA	NA	NA	NA	0.13	NA	3.334
1319	5	23305356	23305356	G	A	intergenic	CDH12,PRDM9	dist=451625;dist=202368	NA	NA	upstream	ENSG00000250332	NA	NA	NA	NA	NA	5p14.2	NA	NA	NA	NA	rs6894054	0.14	0.14	0.116	0.210264	0.166	0.125	0.2147	0.1558	0.4141	0.14	0.11	0.19	0.14	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.035839	NA	NA	NA	NA	NA	0.138	NA	3.334
1319	10	73827292	73827292	A	G	intronic	SPOCK2	NA	NA	NA	intronic	ENSG00000107742	NA	NA	NA	NA	NA	10q22.1	NA	NA	NA	NA	rs1530804	0.68	0.68	0.69	0.65595	0.666	0.4286	0.6758	0.9644	0.4489	0.66	0.46	0.68	0.97	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.533874	NA	NA	NA	NA	NA	0.754	NA	3.334
1319	11	26677867	26677867	T	C	intronic	ANO3	NA	NA	NA	intronic	ENSG00000134343	NA	NA	NA	NA	NA	11p14.2	NA	NA	NA	NA	rs10835050	0.54	0.54	0.499	0.558906	0.666	0.5675	0.5519	0.3268	0.7587	0.68	0.53	0.54	0.32	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.765826	NA	NA	NA	NA	NA	0.493	NA	3.334
1319	11	119028813	119028813	C	G	intronic	ABCG4	NA	NA	NA	intronic	ENSG00000172350	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs626776	0.76	0.76	0.795	0.786741	0.666	0.8978	0.4971	0.9244	0.816	0.65	0.88	0.55	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.177481	NA	NA	NA	NA	NA	0.826	NA	3.334
1319	12	129500031	129500031	C	A	intergenic	GLT1D1,TMEM132D	dist=30522;dist=56240	NA	NA	ncRNA_exonic	ENSG00000256581	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs493149	0.76	0.76	0.757	0.764377	0.666	0.8889	0.7695	0.739	0.7679	0.67	0.9	0.74	0.75	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.391153	NA	NA	NA	NA	NA	0.652	NA	3.334
1319	19	7976529	7976529	T	C	intronic	MAP2K7	NA	NA	NA	intronic	ENSG00000076984	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs2303700	0.63	0.63	0.603	0.602436	0.666	0.5883	0.7291	0.5303	0.5593	0.65	0.6	0.72	0.58	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.090263	NA	NA	NA	NA	NA	0.572	NA	3.334
1319	7	43591955	43591955	A	G	intronic	HECW1	NA	NA	NA	intronic	ENSG00000002746	NA	NA	NA	NA	NA	7p13	NA	Name=CEBPB	NA	NA	rs4724220	0.49	0.49	0.47	0.45028	0.5964	0.4514	0.5245	0.3064	0.4407	0.6	0.47	0.5	0.31	0.5079	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.044513	NA	NA	0.561946	0.342878	NA	0.493	NA	3.333754
1319	7	66582460	66582460	T	A	intronic	TYW1	NA	NA	NA	intronic	ENSG00000198874	NA	NA	NA	NA	NA	7q11.21	NA	NA	NA	NA	rs35171532	0.23	0.23	0.223	0.270966	0.2177	0.0724	0.1974	0.475	0.3067	0.19	0.08	0.21	0.49	0.2258	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.513475	NA	NA	0.222843	0.404589	ID=COSM328626;OCCURENCE=4(kidney)	0.145	NA	3.333657
1319	1	121484779	121484779	G	A	intergenic	EMBP1,NONE	dist=171093;dist=NONE	NA	NA	intergenic	ENSG00000224857,NONE	dist=162457;dist=NONE	NA	NA	NA	NA	1p11.2	NA	NA	NA	NA	rs4788235	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.128592	NA	NA	NA	NA	NA	NA	NA	3.3333334
1319	1	149029149	149029149	A	G	intergenic	LOC645166,LOC388692	dist=76095;dist=250327	NA	NA	intergenic	ENSG00000232527,ENSG00000264022	dist=77554;dist=7163	NA	NA	NA	NA	1q21.2	NA	NA	NA	NA	rs57759852	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.895963	NA	NA	NA	NA	NA	0.225	NA	3.3333334
1319	3	141538822	141538822	C	T	intergenic	GRK7,ATP1B3	dist=2930;dist=56648	NA	NA	intergenic	ENSG00000114124,ENSG00000228398	dist=1490;dist=45027	NA	NA	NA	NA	3q23	NA	NA	NA	NA	rs78193590	NA	NA	0.203	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.747593	NA	NA	NA	NA	NA	NA	NA	3.3333334
1319	4	3626290	3626290	G	C	intergenic	FLJ35424,LOC100133461	dist=33578;dist=49030	NA	NA	intergenic	ENSG00000216560,ENSG00000250681	dist=34559;dist=8466	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs76033358	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.99343	NA	NA	NA	NA	NA	NA	NA	3.3333334
1319	4	3626365	3626365	A	G	intergenic	FLJ35424,LOC100133461	dist=33653;dist=48955	NA	NA	intergenic	ENSG00000216560,ENSG00000250681	dist=34634;dist=8391	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs68162223	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.768935	NA	NA	NA	NA	NA	0.478	NA	3.3333334
1319	4	3626377	3626377	G	T	intergenic	FLJ35424,LOC100133461	dist=33665;dist=48943	NA	NA	intergenic	ENSG00000216560,ENSG00000250681	dist=34646;dist=8379	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs67018563	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.120687	NA	NA	NA	NA	NA	0.486	NA	3.3333334
1319	4	3627371	3627371	G	C	intergenic	FLJ35424,LOC100133461	dist=34659;dist=47949	NA	NA	intergenic	ENSG00000216560,ENSG00000250681	dist=35640;dist=7385	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs73205002	NA	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.672043	NA	NA	NA	NA	NA	0.486	NA	3.3333334
1319	4	139544632	139544632	G	T	intergenic	LINC00499,CCRN4L	dist=199134;dist=392311	NA	NA	intergenic	ENSG00000248795,ENSG00000250977	dist=61537;dist=41247	NA	NA	NA	NA	4q31.1	NA	NA	NA	NA	rs139550054	0.01	0.01	0.008	0.0113818	NA	NA	0.0058	0.0401	NA	NA	NA	0.01	0.03	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.070613	NA	NA	NA	NA	NA	NA	NA	3.3333334
1319	4	139544796	139544796	G	C	intergenic	LINC00499,CCRN4L	dist=199298;dist=392147	NA	NA	intergenic	ENSG00000248795,ENSG00000250977	dist=61701;dist=41083	NA	NA	NA	NA	4q31.1	NA	NA	NA	NA	rs113605037	0.02	0.02	0.024	0.0279553	NA	NA	0.0101	0.1006	NA	NA	NA	0.01	0.1	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.080777	NA	NA	NA	NA	NA	0.051	NA	3.3333334
1319	4	190597710	190597710	G	A	intergenic	LOC401164,FRG1	dist=1074648;dist=264264	NA	NA	intergenic	ENSG00000250739,ENSG00000202215	dist=15070;dist=32983	NA	NA	NA	NA	4q35.2	NA	NA	NA	NA	rs62331390	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.341057	NA	NA	NA	NA	NA	0.486	NA	3.3333334
1319	4	190597739	190597739	C	G	intergenic	LOC401164,FRG1	dist=1074677;dist=264235	NA	NA	intergenic	ENSG00000250739,ENSG00000202215	dist=15099;dist=32954	NA	NA	NA	NA	4q35.2	NA	NA	NA	NA	rs5023411	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.015206	NA	NA	NA	NA	NA	0.493	NA	3.3333334
1319	6	58776517	58776517	G	C	intergenic	GUSBP4,NONE	dist=488793;dist=NONE	NA	NA	intergenic	ENSG00000223633,NONE	dist=262657;dist=NONE	NA	NA	NA	NA	6p11.1	NA	NA	NA	NA	rs9500442	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.299822	NA	NA	NA	NA	NA	0.022	NA	3.3333334
1319	6	58776821	58776821	C	G	intergenic	GUSBP4,NONE	dist=489097;dist=NONE	NA	NA	intergenic	ENSG00000223633,NONE	dist=262961;dist=NONE	NA	NA	NA	NA	6p11.1	NA	NA	NA	NA	rs9638020	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.098	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.304275	NA	NA	NA	NA	NA	0.08	NA	3.3333334
1319	6	58776965	58776965	C	T	intergenic	GUSBP4,NONE	dist=489241;dist=NONE	NA	NA	intergenic	ENSG00000223633,NONE	dist=263105;dist=NONE	NA	NA	NA	NA	6p11.1	NA	NA	NA	NA	rs9632509	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.122493	NA	NA	NA	NA	NA	0.268	NA	3.3333334
1319	6	58777098	58777098	A	T	intergenic	GUSBP4,NONE	dist=489374;dist=NONE	NA	NA	intergenic	ENSG00000223633,NONE	dist=263238;dist=NONE	NA	NA	NA	NA	6p11.1	NA	NA	NA	NA	rs4330557	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.00042	NA	NA	NA	NA	NA	0.181	NA	3.3333334
1319	6	58777178	58777178	G	T	intergenic	GUSBP4,NONE	dist=489454;dist=NONE	NA	NA	intergenic	ENSG00000223633,NONE	dist=263318;dist=NONE	NA	NA	NA	NA	6p11.1	NA	NA	NA	NA	rs9638022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.270728	NA	NA	NA	NA	NA	0.348	NA	3.3333334
1319	6	58777295	58777295	T	C	intergenic	GUSBP4,NONE	dist=489571;dist=NONE	NA	NA	intergenic	ENSG00000223633,NONE	dist=263435;dist=NONE	NA	NA	NA	NA	6p11.1	NA	NA	NA	NA	rs9638023	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.086451	NA	NA	NA	NA	NA	0.246	NA	3.3333334
1319	6	58777312	58777312	T	C	intergenic	GUSBP4,NONE	dist=489588;dist=NONE	NA	NA	intergenic	ENSG00000223633,NONE	dist=263452;dist=NONE	NA	NA	NA	NA	6p11.1	NA	NA	NA	NA	rs9632511	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.168388	NA	NA	NA	NA	NA	0.13	NA	3.3333334
1319	6	58777500	58777500	C	T	intergenic	GUSBP4,NONE	dist=489776;dist=NONE	NA	NA	intergenic	ENSG00000223633,NONE	dist=263640;dist=NONE	NA	NA	NA	NA	6p11.1	NA	NA	NA	NA	rs4314523	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.253142	NA	NA	NA	NA	NA	0.007	NA	3.3333334
1319	6	58777573	58777573	C	T	intergenic	GUSBP4,NONE	dist=489849;dist=NONE	NA	NA	intergenic	ENSG00000223633,NONE	dist=263713;dist=NONE	NA	NA	NA	NA	6p11.1	NA	NA	NA	NA	rs9632516	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.16926	NA	NA	NA	NA	NA	0.174	NA	3.3333334
1319	6	58777666	58777666	C	G	intergenic	GUSBP4,NONE	dist=489942;dist=NONE	NA	NA	intergenic	ENSG00000223633,NONE	dist=263806;dist=NONE	NA	NA	NA	NA	6p11.1	NA	NA	NA	NA	rs4374848	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.323714	NA	NA	NA	NA	NA	0.014	NA	3.3333334
1319	6	58777785	58777785	T	C	intergenic	GUSBP4,NONE	dist=490061;dist=NONE	NA	NA	intergenic	ENSG00000223633,NONE	dist=263925;dist=NONE	NA	NA	NA	NA	6p11.1	NA	NA	NA	NA	rs9689742	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.054	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.10007	NA	NA	NA	NA	NA	0.043	NA	3.3333334
1319	6	58777836	58777836	A	C	intergenic	GUSBP4,NONE	dist=490112;dist=NONE	NA	NA	intergenic	ENSG00000223633,NONE	dist=263976;dist=NONE	NA	NA	NA	NA	6p11.1	NA	NA	NA	NA	rs9632517	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.086864	NA	NA	NA	NA	NA	0.565	NA	3.3333334
1319	6	58778019	58778019	T	G	intergenic	GUSBP4,NONE	dist=490295;dist=NONE	NA	NA	intergenic	ENSG00000223633,NONE	dist=264159;dist=NONE	NA	NA	NA	NA	6p11.1	NA	NA	NA	NA	rs9638027	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.11553	NA	NA	NA	NA	NA	0.225	NA	3.3333334
1319	6	58778025	58778025	A	G	intergenic	GUSBP4,NONE	dist=490301;dist=NONE	NA	NA	intergenic	ENSG00000223633,NONE	dist=264165;dist=NONE	NA	NA	NA	NA	6p11.1	NA	NA	NA	NA	rs9638028	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.137766	NA	NA	NA	NA	NA	0.268	NA	3.3333334
1319	6	58778207	58778207	G	A	intergenic	GUSBP4,NONE	dist=490483;dist=NONE	NA	NA	intergenic	ENSG00000223633,NONE	dist=264347;dist=NONE	NA	NA	NA	NA	6p11.1	NA	NA	NA	NA	rs6588729	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.147908	NA	NA	NA	NA	NA	0.101	NA	3.3333334
1319	6	58778649	58778649	C	T	intergenic	GUSBP4,NONE	dist=490925;dist=NONE	NA	NA	intergenic	ENSG00000223633,NONE	dist=264789;dist=NONE	NA	NA	NA	NA	6p11.1	NA	NA	NA	NA	rs6421500	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.390063	NA	NA	NA	NA	NA	0.036	NA	3.3333334
1319	6	58778809	58778809	A	C	intergenic	GUSBP4,NONE	dist=491085;dist=NONE	NA	NA	intergenic	ENSG00000223633,NONE	dist=264949;dist=NONE	NA	NA	NA	NA	6p11.1	NA	NA	NA	NA	rs6651014	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.036082	NA	NA	NA	NA	NA	0.297	NA	3.3333334
1319	6	58778967	58778967	T	C	intergenic	GUSBP4,NONE	dist=491243;dist=NONE	NA	NA	intergenic	ENSG00000223633,NONE	dist=265107;dist=NONE	NA	NA	NA	NA	6p11.1	NA	NA	NA	NA	rs6651012	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.019996	NA	NA	NA	NA	NA	0.181	NA	3.3333334
1319	6	58779097	58779097	A	G	intergenic	GUSBP4,NONE	dist=491373;dist=NONE	NA	NA	intergenic	ENSG00000223633,NONE	dist=265237;dist=NONE	NA	NA	NA	NA	6p11.1	NA	NA	NA	NA	rs9500231	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.018669	NA	NA	NA	NA	NA	0.123	NA	3.3333334
1319	6	58779308	58779308	T	C	intergenic	GUSBP4,NONE	dist=491584;dist=NONE	NA	NA	intergenic	ENSG00000223633,NONE	dist=265448;dist=NONE	NA	NA	NA	NA	6p11.1	NA	NA	NA	NA	rs6651018	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.03944	NA	NA	NA	NA	NA	0.051	NA	3.3333334
1319	6	58779328	58779328	A	G	intergenic	GUSBP4,NONE	dist=491604;dist=NONE	NA	NA	intergenic	ENSG00000223633,NONE	dist=265468;dist=NONE	NA	NA	NA	NA	6p11.1	NA	NA	NA	NA	rs6651019	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.044036	NA	NA	NA	NA	NA	0.058	NA	3.3333334
1319	7	61969087	61969087	A	G	intergenic	NONE,ZNF733P	dist=NONE;dist=782583	NA	NA	intergenic	ENSG00000233918,ENSG00000207443	dist=146901;dist=502754	NA	NA	NA	NA	7q11.21	NA	NA	NA	NA	rs2167859	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.201835	NA	NA	NA	NA	NA	NA	NA	3.3333334
1319	7	142110027	142110027	T	C	intergenic	LOC730441,MTRNR2L6	dist=137959;dist=264104	NA	NA	intergenic	ENSG00000211732,ENSG00000211731	dist=5474;dist=1366	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs370441521	NA	NA	NA	0.00519169	NA	NA	0.0014	0.003	0.0215	NA	NA	NA	NA	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.826771	NA	NA	NA	NA	NA	0.174	NA	3.3333334
1319	8	144249792	144249792	G	A	intergenic	LY6H,GPIHBP1	dist=7739;dist=45276	NA	NA	intergenic	ENSG00000176956,ENSG00000182851	dist=7664;dist=45276	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs180845927	0.38	0.38	NA	NA	NA	NA	NA	NA	NA	0.32	0.48	0.45	0.28	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.290716	NA	NA	NA	NA	NA	0.014	NA	3.3333334
1319	10	42529432	42529432	T	A	intergenic	NONE,LOC441666	dist=NONE;dist=297882	NA	NA	intergenic	NONE,ENSG00000229485	dist=NONE;dist=115326	NA	NA	NA	NA	10q11.21	NA	NA	NA	NA	rs28853943	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.146128	NA	NA	NA	NA	NA	NA	NA	3.3333334
1319	10	42529437	42529437	T	C	intergenic	NONE,LOC441666	dist=NONE;dist=297877	NA	NA	intergenic	NONE,ENSG00000229485	dist=NONE;dist=115321	NA	NA	NA	NA	10q11.21	NA	NA	NA	NA	rs201677947	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.255584	NA	NA	NA	NA	NA	NA	NA	3.3333334
1319	10	42767319	42767319	T	A	intergenic	NONE,LOC441666	dist=NONE;dist=59995	NA	NA	intergenic	ENSG00000264398,ENSG00000228755	dist=36896;dist=7863	NA	NA	NA	NA	10q11.21	NA	NA	NA	NA	rs77679807	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.518267	NA	NA	NA	NA	NA	NA	NA	3.3333334
1319	10	42767329	42767329	G	A	intergenic	NONE,LOC441666	dist=NONE;dist=59985	NA	NA	intergenic	ENSG00000264398,ENSG00000228755	dist=36906;dist=7853	NA	NA	NA	NA	10q11.21	NA	NA	NA	NA	rs61853463	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.071359	NA	NA	NA	NA	NA	NA	NA	3.3333334
1319	10	42767352	42767352	T	G	intergenic	NONE,LOC441666	dist=NONE;dist=59962	NA	NA	intergenic	ENSG00000264398,ENSG00000228755	dist=36929;dist=7830	NA	NA	NA	NA	10q11.21	NA	NA	NA	NA	rs61853464	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.283691	NA	NA	NA	NA	NA	NA	NA	3.3333334
1319	14	19123663	19123663	A	G	intergenic	NONE,OR11H12	dist=NONE;dist=253931	NA	NA	intergenic	ENSG00000206906,ENSG00000257171	dist=4042;dist=48440	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs28587166	NA	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.678374	NA	NA	NA	NA	NA	0.203	NA	3.3333334
1319	14	106094493	106094493	C	T	intergenic	TMEM121,ELK2AP	dist=97954;dist=41421	NA	NA	intergenic	ENSG00000211892,ENSG00000211893	dist=2090;dist=14896	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs148961702	0.32	0.32	0.277	NA	NA	NA	NA	NA	NA	0.36	0.32	0.36	0.22	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.137172	NA	NA	NA	NA	NA	NA	NA	3.3333334
1319	14	106094521	106094521	C	G	intergenic	TMEM121,ELK2AP	dist=97982;dist=41393	NA	NA	intergenic	ENSG00000211892,ENSG00000211893	dist=2118;dist=14868	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs199718273	NA	NA	0.391	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.134893	NA	NA	NA	NA	NA	0.007	NA	3.3333334
1319	14	106094533	106094533	C	G	intergenic	TMEM121,ELK2AP	dist=97994;dist=41381	NA	NA	intergenic	ENSG00000211892,ENSG00000211893	dist=2130;dist=14856	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs60962705	0.48	0.48	0.47	NA	NA	NA	NA	NA	NA	0.49	0.57	0.48	0.36	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.097395	NA	NA	NA	NA	NA	0.022	NA	3.3333334
1319	15	20507130	20507130	T	C	intergenic	CHEK2P2,HERC2P3	dist=10319;dist=106520	NA	NA	intergenic	ENSG00000259156,ENSG00000258654	dist=10291;dist=42859	NA	NA	NA	NA	15q11.1	NA	NA	NA	NA	rs28588346	NA	NA	0.269	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.039373	NA	NA	NA	NA	NA	NA	NA	3.3333334
1319	16	25303231	25303231	C	T	intergenic	ZKSCAN2,HS3ST4	dist=34376;dist=400116	NA	NA	intergenic	ENSG00000155592,ENSG00000261636	dist=33979;dist=127904	NA	NA	NA	NA	16p12.1	NA	NA	NA	NA	rs8060034	0.58	0.58	0.66	NA	NA	NA	NA	NA	NA	0.67	0.55	0.59	0.44	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.017585	NA	NA	NA	NA	NA	0.406	NA	3.3333334
1319	16	46388407	46388407	C	T	intergenic	NONE,ANKRD26P1	dist=NONE;dist=114842	NA	NA	intergenic	NONE,ENSG00000261239	dist=NONE;dist=114846	NA	NA	NA	NA	16q11.2	NA	NA	NA	NA	rs4126771	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.474139	NA	NA	NA	NA	NA	NA	NA	3.3333334
1319	16	46400108	46400108	C	G	intergenic	NONE,ANKRD26P1	dist=NONE;dist=103141	NA	NA	intergenic	NONE,ENSG00000261239	dist=NONE;dist=103145	NA	NA	NA	NA	16q11.2	NA	NA	NA	NA	rs8061098	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.087	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.430234	NA	NA	NA	NA	NA	0.072	NA	3.3333334
1319	16	46403723	46403723	C	T	intergenic	NONE,ANKRD26P1	dist=NONE;dist=99526	NA	NA	intergenic	NONE,ENSG00000261239	dist=NONE;dist=99530	NA	NA	NA	NA	16q11.2	NA	NA	NA	NA	rs4009110	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.413351	NA	NA	NA	NA	NA	NA	NA	3.3333334
1319	16	46404938	46404938	A	G	intergenic	NONE,ANKRD26P1	dist=NONE;dist=98311	NA	NA	intergenic	NONE,ENSG00000261239	dist=NONE;dist=98315	NA	NA	NA	NA	16q11.2	NA	NA	NA	NA	rs4290498	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.155336	NA	NA	NA	NA	NA	0.13	NA	3.3333334
1319	16	46417296	46417296	G	T	intergenic	NONE,ANKRD26P1	dist=NONE;dist=85953	NA	NA	intergenic	NONE,ENSG00000261239	dist=NONE;dist=85957	NA	NA	NA	NA	16q11.2	NA	NA	NA	NA	rs112770556	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.410362	NA	NA	NA	NA	NA	0.232	NA	3.3333334
1319	17	21247540	21247540	C	T	intergenic	MAP2K3,KCNJ12	dist=28989;dist=32159	NA	NA	intergenic	ENSG00000034152,ENSG00000184185	dist=28988;dist=31969	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs79496925	NA	NA	0.358	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.229179	NA	NA	NA	NA	NA	NA	NA	3.3333334
1319	17	21326277	21326277	C	G	intergenic	KCNJ12,C17orf51	dist=3098;dist=105294	NA	NA	intergenic	ENSG00000184185,ENSG00000265881	dist=3098;dist=21868	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs73314001	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.718373	NA	NA	NA	NA	NA	0.283	NA	3.3333334
1319	17	21328210	21328210	A	G	intergenic	KCNJ12,C17orf51	dist=5031;dist=103361	NA	NA	intergenic	ENSG00000184185,ENSG00000265881	dist=5031;dist=19935	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs1714846	NA	NA	0.195	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.076	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.612785	NA	NA	NA	NA	NA	0.058	NA	3.3333334
1319	17	21517802	21517802	G	A	intergenic	C17orf51,FAM27L	dist=62861;dist=307568	NA	NA	intergenic	ENSG00000263375,ENSG00000265019	dist=20356;dist=18212	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs35259287	NA	NA	0.373	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.158063	NA	NA	NA	NA	NA	NA	NA	3.3333334
1319	17	21517885	21517885	G	A	intergenic	C17orf51,FAM27L	dist=62944;dist=307485	NA	NA	intergenic	ENSG00000263375,ENSG00000265019	dist=20439;dist=18129	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs73980741	NA	NA	NA	0.000399361	NA	0.001	NA	NA	0.001	NA	NA	NA	NA	NA	0.065	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.279753	NA	NA	NA	NA	NA	0.109	NA	3.3333334
1319	17	21518782	21518782	C	G	intergenic	C17orf51,FAM27L	dist=63841;dist=306588	NA	NA	intergenic	ENSG00000263375,ENSG00000265019	dist=21336;dist=17232	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs77153579	NA	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.292177	NA	NA	NA	NA	NA	NA	NA	3.3333334
1319	17	21518906	21518906	C	A	intergenic	C17orf51,FAM27L	dist=63965;dist=306464	NA	NA	intergenic	ENSG00000263375,ENSG00000265019	dist=21460;dist=17108	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs73313260	NA	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.637834	NA	NA	NA	NA	NA	NA	NA	3.3333334
1319	20	26078778	26078778	A	G	intergenic	FAM182A,NCOR1P1	dist=11225;dist=5274	NA	NA	intergenic	ENSG00000125804,ENSG00000240108	dist=5095;dist=5274	NA	NA	NA	NA	20p11.1	NA	NA	NA	NA	rs78847942	NA	NA	0.368	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.830057	NA	NA	NA	NA	NA	NA	NA	3.3333334
1319	20	26078794	26078794	G	A	intergenic	FAM182A,NCOR1P1	dist=11241;dist=5258	NA	NA	intergenic	ENSG00000125804,ENSG00000240108	dist=5111;dist=5258	NA	NA	NA	NA	20p11.1	NA	NA	NA	NA	rs200528674	NA	NA	0.478	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.610979	NA	NA	NA	NA	NA	NA	NA	3.3333334
1319	21	9866106	9866106	T	A	intergenic	MIR3687,TEKT4P2	dist=39843;dist=41083	NA	NA	intergenic	ENSG00000264063,ENSG00000188681	dist=39843;dist=41084	NA	NA	NA	NA	21p11.2	NA	NA	NA	NA	rs6824302	NA	NA	0.501	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.065	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.003267	NA	NA	NA	NA	NA	0.058	NA	3.3333334
1319	21	10614048	10614048	G	T	intergenic	TEKT4P2,TPTE	dist=645455;dist=292695	NA	NA	intergenic	ENSG00000270533,ENSG00000169861	dist=137987;dist=248574	NA	NA	NA	NA	21p11.2	NA	NA	NA	NA	rs4072083	NA	NA	0.493	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.803132	NA	NA	NA	NA	NA	NA	NA	3.3333334
1319	21	10624119	10624119	G	A	intergenic	TEKT4P2,TPTE	dist=655526;dist=282624	NA	NA	intergenic	ENSG00000270533,ENSG00000169861	dist=148058;dist=238503	NA	NA	NA	NA	21p11.2	NA	NA	NA	NA	rs71215809	NA	NA	0.552	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.012912	NA	NA	NA	NA	NA	0.029	NA	3.3333334
1319	21	10624139	10624139	C	T	intergenic	TEKT4P2,TPTE	dist=655546;dist=282604	NA	NA	intergenic	ENSG00000270533,ENSG00000169861	dist=148078;dist=238483	NA	NA	NA	NA	21p11.2	NA	NA	NA	NA	rs71215808	NA	NA	0.223	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.831082	NA	NA	NA	NA	NA	0.036	NA	3.3333334
1319	21	10624154	10624154	G	A	intergenic	TEKT4P2,TPTE	dist=655561;dist=282589	NA	NA	intergenic	ENSG00000270533,ENSG00000169861	dist=148093;dist=238468	NA	NA	NA	NA	21p11.2	NA	NA	NA	NA	rs1928601	NA	NA	0.256	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.743812	NA	NA	NA	NA	NA	0.036	NA	3.3333334
1319	21	10885303	10885303	G	A	intergenic	TEKT4P2,TPTE	dist=916710;dist=21440	NA	NA	intergenic	ENSG00000235476,ENSG00000223925	dist=12874;dist=13779	NA	NA	NA	NA	21p11.2	NA	NA	NA	NA	rs59109662	NA	NA	0.199	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.563773	NA	NA	NA	NA	NA	NA	NA	3.3333334
1319	X	106296438	106296438	G	A	intergenic	MORC4,RBM41	dist=52964;dist=8680	NA	NA	intergenic	ENSG00000231144,ENSG00000089682	dist=20388;dist=11212	NA	NA	NA	NA	Xq22.3	NA	NA	NA	NA	rs201227745	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.050966	NA	NA	NA	NA	NA	NA	NA	3.3333334
1319	X	106296453	106296453	A	T	intergenic	MORC4,RBM41	dist=52979;dist=8665	NA	NA	intergenic	ENSG00000231144,ENSG00000089682	dist=20403;dist=11197	NA	NA	NA	NA	Xq22.3	NA	NA	NA	NA	rs199511300	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.881699	NA	NA	NA	NA	NA	NA	NA	3.3333334
1319	Y	13266499	13266499	A	G	intergenic	NONE,GYG2P1	dist=NONE;dist=1251416	NA	NA	intergenic	ENSG00000270570,ENSG00000263502	dist=2936;dist=73860	NA	NA	NA	NA	Yq11.1	NA	NA	NA	NA	rs4242830	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.045702	NA	NA	NA	NA	NA	NA	NA	3.3333334
1319	Y	13310740	13310740	G	A	intergenic	NONE,GYG2P1	dist=NONE;dist=1207175	NA	NA	intergenic	ENSG00000270570,ENSG00000263502	dist=47177;dist=29619	NA	NA	NA	NA	Yq11.1	NA	NA	NA	NA	rs75526384	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.762956	NA	NA	NA	NA	NA	NA	NA	3.3333334
1319	Y	13310768	13310768	G	C	intergenic	NONE,GYG2P1	dist=NONE;dist=1207147	NA	NA	intergenic	ENSG00000270570,ENSG00000263502	dist=47205;dist=29591	NA	NA	NA	NA	Yq11.1	NA	NA	NA	NA	rs79431658	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.054238	NA	NA	NA	NA	NA	NA	NA	3.3333334
1319	Y	13310775	13310775	A	G	intergenic	NONE,GYG2P1	dist=NONE;dist=1207140	NA	NA	intergenic	ENSG00000270570,ENSG00000263502	dist=47212;dist=29584	NA	NA	NA	NA	Yq11.1	NA	NA	NA	NA	rs79927335	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.003926	NA	NA	NA	NA	NA	NA	NA	3.3333334
1319	Y	13310784	13310784	T	G	intergenic	NONE,GYG2P1	dist=NONE;dist=1207131	NA	NA	intergenic	ENSG00000270570,ENSG00000263502	dist=47221;dist=29575	NA	NA	NA	NA	Yq11.1	NA	NA	NA	NA	rs75891039	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.083873	NA	NA	NA	NA	NA	NA	NA	3.3333334
1319	Y	13537392	13537392	A	T	intergenic	NONE,GYG2P1	dist=NONE;dist=980523	NA	NA	intergenic	ENSG00000183704,ENSG00000270242	dist=12675;dist=13983	NA	NA	NA	NA	Yq11.21	NA	NA	NA	NA	rs62604956	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.940018	NA	NA	NA	NA	NA	NA	NA	3.3333334
1319	Y	13541454	13541454	T	C	intergenic	NONE,GYG2P1	dist=NONE;dist=976461	NA	NA	intergenic	ENSG00000183704,ENSG00000270242	dist=16737;dist=9921	NA	NA	NA	NA	Yq11.21	NA	NA	NA	NA	rs75007464	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.176034	NA	NA	NA	NA	NA	NA	NA	3.3333334
1319	3	174974177	174974177	C	G	intronic	NAALADL2	NA	NA	NA	ncRNA_intronic	ENSG00000226779	NA	NA	NA	NA	NA	3q26.31	NA	NA	NA	NA	rs13072102	0.26	0.26	0.246	0.247404	0.3419	0.3343	0.1844	0.031	0.3978	0.35	0.36	0.22	0.03	0.3233	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.418901	3.418901	NA	0.335011	0.089532	NA	0.145	NA	3.3331223
1319	1	145355624	145355624	C	T	intronic	NBPF10,NBPF9	NA	NA	NA	intronic	ENSG00000163386	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs142055197	NA	NA	0.326	0.695687	0.667	0.6091	0.7089	0.8336	0.6186	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.865308	NA	NA	NA	NA	NA	NA	NA	3.333
1319	2	242617792	242617792	A	G	intronic	DTYMK	NA	NA	NA	intronic	ENSG00000168393	NA	NA	NA	NA	NA	2q37.3	NA	NA	NA	NA	rs4076640	0.58	0.58	0.544	0.544529	0.667	0.4921	0.7104	0.4357	0.502	0.67	0.5	0.69	0.46	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.750964	NA	NA	NA	NA	NA	0.536	NA	3.333
1319	5	176005175	176005175	A	C	intronic	CDHR2	NA	NA	NA	intronic	ENSG00000074276	NA	NA	NA	NA	NA	5q35.2	NA	NA	NA	NA	rs1565150	0.53	0.53	0.51	0.498802	0.667	0.37	0.6614	0.4032	0.4724	0.68	0.35	0.71	0.38	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.049672	NA	NA	NA	NA	NA	0.42	NA	3.333
1319	7	4217969	4217969	T	A	intronic	SDK1	NA	NA	NA	intronic	ENSG00000146555	NA	NA	NA	NA	NA	7p22.2	NA	NA	NA	NA	rs649494	0.63	0.63	0.603	0.593051	0.667	0.7083	0.7089	0.3737	0.6125	0.68	0.74	0.71	0.36	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.501023	NA	NA	NA	NA	NA	0.638	NA	3.333
1319	17	17719503	17719503	G	T	intronic	SREBF1	NA	NA	NA	intronic	ENSG00000072310	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs7501788	NA	NA	NA	0.573882	0.5875	0.5933	0.5879	0.559	0.5501	NA	NA	NA	NA	0.0795	0.022	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.491617	NA	NA	NA	NA	NA	0.022	NA	3.333
1319	20	29873114	29873114	G	T	intergenic	DEFB115,DEFB116	dist=25679;dist=17901	NA	NA	downstream	ENSG00000224628	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs41293110	0.09	0.09	0.074	0.0692891	0.167	NA	0.1052	0.0461	0.046	0.18	NA	0.11	0.06	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.315226	NA	NA	NA	NA	NA	0.123	NA	3.333
1319	6	76744298	76744298	C	T	intronic	IMPG1	NA	NA	NA	intronic	ENSG00000112706	NA	NA	NA	NA	NA	6q14.1	NA	NA	NA	NA	rs2274348	0.22	0.22	0.17	0.177516	0.2256	0.3125	0.2277	0.0439	0.1339	0.23	0.31	0.25	0.05	0.2126	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.054624	NA	NA	0.228837	0.075125	NA	0.174	NA	3.332963
1319	17	48273439	48273439	T	C	intronic	COL1A1	NA	NA	NA	intronic	ENSG00000108821	NA	NA	NA	NA	NA	17q21.33	NA	Name=Pol2	NA	NA	rs2734281	0.79	0.79	0.822	0.792532	0.836	0.5635	0.7939	0.9463	0.7751	0.84	0.57	0.8	0.95	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.208552	NA	NA	0.831238	0.932803	NA	0.833	NA	3.332762
1319	1	211276828	211276828	C	T	intronic	KCNH1	NA	NA	NA	intronic	ENSG00000143473	NA	NA	NA	NA	NA	1q32.2	NA	NA	NA	NA	rs3762452	0.17	0.17	0.159	0.145168	0.2416	0.0942	0.1167	0.1293	0.1401	0.24	0.09	0.14	0.16	0.1931	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.50618	2.50618	NA	0.232666	0.140781	NA	0.13	NA	3.332634
1319	19	43243248	43243248	G	A	intronic	PSG3	NA	NA	NA	intronic	ENSG00000221826	NA	NA	NA	Score=304;Name=lod=23	NA	19q13.2	NA	NA	NA	NA	rs12185500	0.59	0.59	0.5	0.656749	0.5507	0.4772	0.6571	0.8911	0.6339	0.55	0.42	0.62	0.85	0.5903	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.000386	NA	NA	0.526395	0.816076	NA	0.442	NA	3.332605
1319	17	1783812	1783812	T	C	intronic	RPA1	NA	NA	NA	intronic	ENSG00000132383	NA	NA	NA	NA	NA	17p13.3	NA	NA	NA	NA	rs2277694	0.19	0.19	0.169	0.171925	0.2237	0.1567	0.2651	0.1377	0.1145	0.21	0.18	0.27	0.13	0.2118	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.196186	NA	NA	0.231977	0.170222	NA	0.283	NA	3.332523
1319	10	43349261	43349261	G	C	intergenic	BMS1,MIR5100	dist=18876;dist=143750	NA	NA	intergenic	ENSG00000252416,ENSG00000234944	dist=21263;dist=17708	NA	NA	NA	NA	10q11.21	NA	NA	NA	NA	rs148402205	0.0027	0.0027	0.002	0.0061901	0.001	NA	0.0058	0.0197	NA	NA	NA	0.01	0.01	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.908782	NA	NA	NA	NA	NA	0.007	NA	3.3323334
1319	18	49224921	49224921	G	A	intergenic	LOC100287225,DCC	dist=136082;dist=641621	NA	NA	intergenic	ENSG00000265712,ENSG00000215457	dist=10342;dist=146456	NA	NA	NA	NA	18q21.2	NA	NA	NA	NA	rs190062327	0.01	0.01	NA	0.0061901	0.001	NA	0.0058	0.0197	NA	0.0013	0.01	0.0028	0.02	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.788398	NA	NA	NA	NA	NA	NA	NA	3.3323334
1319	2	89309424	89309424	G	A	intergenic	MIR4436A,NONE	dist=197456;dist=NONE	NA	NA	downstream	ENSG00000241755	NA	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs10205742	0.34	0.34	0.369	0.361022	0.168	0.4097	0.317	0.5159	0.3313	0.16	0.45	0.28	0.53	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.007598	NA	NA	NA	NA	ID=COSN166174;OCCURENCE=1(breast)	0.239	NA	3.332
1319	6	16290862	16290862	T	C	intronic	GMPR	NA	NA	NA	intronic	ENSG00000137198	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs6926552	0.21	0.21	0.183	0.257188	0.2107	0.0298	0.2392	0.4561	0.2832	0.2	0.03	0.21	0.42	0.2461	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.87564	NA	NA	0.211744	0.424648	NA	0.167	NA	3.331456
1319	14	88971758	88971758	T	G	intronic	PTPN21	NA	NA	NA	ncRNA_intronic	ENSG00000258983	NA	NA	NA	NA	NA	14q31.3	NA	NA	NA	NA	rs2274735	0.4	0.4	0.436	0.43111	0.3022	0.3889	0.2911	0.6157	0.4571	0.31	0.36	0.3	0.65	0.3556	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.056717	NA	NA	0.344346	0.57584	NA	0.514	NA	3.3311873
1319	1	16358148	16358148	T	C	intronic	CLCNKA	NA	NA	NA	intronic	ENSG00000186510	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs2015509	0.76	0.76	0.749	0.749201	0.669	0.9742	0.5951	0.7693	0.682	0.67	0.98	0.61	0.77	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.743145	NA	NA	NA	NA	NA	0.732	NA	3.331
1319	11	58604712	58604712	T	C	intronic	GLYATL2	NA	NA	NA	intronic	ENSG00000156689	NA	NA	NA	NA	NA	11q12.1	NA	NA	NA	NA	rs11229653	0.31	0.31	0.271	0.336262	0.2018	0.4841	0.3242	0.2958	0.3855	0.23	0.46	0.27	0.28	0.2761	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.686429	NA	NA	0.191819	0.280574	NA	0.261	NA	3.330281
1319	19	19824850	19824850	T	G	intronic	ZNF14	NA	NA	NA	intronic	ENSG00000105708	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs11085270	0.21	0.21	0.209	0.188099	0.2465	0.2331	0.1628	0.1528	0.1472	0.25	0.2	0.18	0.19	0.2021	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.556188	NA	NA	0.221163	0.149796	NA	0.145	NA	3.330237
1319	7	149981830	149981830	T	G	intronic	ACTR3C	NA	NA	NA	intronic	ENSG00000106526	NA	NA	NA	Score=547;Name=lod=222	NA	7q36.1	NA	NA	NA	NA	rs4725334	NA	NA	0.901	0.926717	0.8022	0.9841	0.8818	0.9887	0.9438	NA	NA	NA	NA	0.8676	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.577525	NA	NA	NA	NA	NA	0.942	NA	3.3302
1319	2	1667310	1667310	G	A	intronic	PXDN	NA	NA	NA	intronic	ENSG00000130508	NA	NA	NA	NA	NA	2p25.3	NA	NA	NA	NA	rs12475392	0.83	0.83	0.825	0.852835	0.67	0.9782	0.7954	0.9244	0.8558	0.68	0.98	0.78	0.91	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.213596	NA	NA	NA	NA	NA	0.812	NA	3.33
1319	5	173258	173258	A	G	intronic	PLEKHG4B	NA	NA	NA	intronic	ENSG00000153404	NA	NA	NA	NA	NA	5p15.33	NA	NA	NA	NA	rs6893369	0.52	0.52	0.532	0.539537	0.67	0.2698	0.5389	0.5825	0.6258	0.67	0.27	0.57	0.56	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.018597	NA	NA	NA	NA	NA	0.674	NA	3.33
1319	19	15075020	15075020	A	G	intronic	SLC1A6	NA	NA	NA	intronic	ENSG00000105143	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs10407669	0.73	0.73	0.726	0.755591	0.67	0.7222	0.7262	0.8684	0.7464	0.66	0.71	0.72	0.85	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.851336	1.851336	NA	NA	NA	NA	0.775	NA	3.33
1319	9	33036550	33036550	A	G	intronic	DNAJA1	NA	NA	NA	intronic	ENSG00000086061	NA	NA	NA	NA	NA	9p21.1	NA	NA	NA	NA	rs2297215	0.16	0.16	0.141	0.137181	0.2475	0.0317	0.196	0.1422	0.0838	0.24	0.05	0.22	0.11	0.1908	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.747757	NA	NA	0.231744	0.1532	NA	0.283	NA	3.329956
1319	19	54940471	54940471	C	T	intronic	TTYH1	NA	NA	NA	intronic	ENSG00000167614	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs889149	0.17	0.17	0.179	0.155152	0.2276	0.1052	0.1945	0.0885	0.1943	0.22	0.1	0.23	0.11	0.2032	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.394462	NA	NA	0.239651	0.100999	NA	0.13	NA	3.329549
1319	15	82523358	82523358	G	A	intronic	EFTUD1	NA	NA	NA	intronic	ENSG00000140598	NA	NA	NA	NA	NA	15q25.2	NA	NA	NA	NA	rs11073036	0.24	0.24	0.227	0.267173	0.2187	0.1696	0.2176	0.292	0.4192	0.23	0.18	0.23	0.31	0.2464	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.569493	NA	NA	0.205449	0.287309	NA	0.304	NA	3.329451
1319	2	131024421	131024421	C	T	intergenic	TUBA3E,CCDC115	dist=68387;dist=71395	NA	NA	intergenic	ENSG00000236595,ENSG00000237722	dist=14289;dist=3748	NA	NA	NA	NA	2q21.1	NA	NA	NA	NA	rs6712541	0.03	0.03	0.03	0.0405351	0.004	NA	0.0245	0.1377	NA	0.004	NA	0.02	0.11	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.759806	NA	NA	NA	NA	NA	0.043	NA	3.3293334
1319	1	13937089	13937089	G	T	intronic	PDPN	NA	NA	NA	intronic	ENSG00000162493	NA	NA	NA	NA	NA	1p36.21	NA	NA	NA	NA	rs2487643	0.65	0.65	0.632	0.661741	0.671	0.5526	0.8026	0.6301	0.7076	0.68	0.55	0.78	0.63	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.365162	NA	NA	NA	NA	NA	0.652	NA	3.329
1319	1	120293367	120293367	T	C	intronic	HMGCS2	NA	NA	NA	intronic	ENSG00000134240	NA	NA	NA	NA	NA	1p12	NA	NA	NA	NA	rs667246	0.68	0.68	0.667	0.688698	0.671	0.6429	0.7378	0.6369	0.7894	0.64	0.66	0.76	0.71	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.55098	NA	NA	NA	NA	NA	0.79	NA	3.329
1319	1	229438828	229438828	G	A	intronic	RAB4A	NA	NA	NA	intronic	ENSG00000168118	NA	NA	NA	NA	NA	1q42.13	NA	NA	NA	NA	rs237787	0.64	0.64	0.616	0.605032	0.671	0.4921	0.6455	0.7171	0.4734	0.66	0.53	0.65	0.7	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.227709	NA	NA	NA	NA	NA	0.746	NA	3.329
1319	6	158068481	158068481	T	C	intronic	ZDHHC14	NA	NA	NA	intronic	ENSG00000175048	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs616538	0.75	0.75	0.748	0.765775	0.671	0.7123	0.7839	0.8903	0.7372	0.68	0.72	0.76	0.87	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.324318	NA	NA	NA	NA	NA	0.717	NA	3.329
1319	16	16108282	16108282	T	C	intronic	ABCC1	NA	NA	NA	intronic	ENSG00000103222	NA	NA	NA	NA	NA	16p13.11	NA	NA	NA	NA	rs4148337	0.53	0.53	0.54	0.536542	0.671	0.376	0.6398	0.5855	0.4243	0.64	0.33	0.62	0.54	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.48688	NA	NA	NA	NA	ID=COSN165125;OCCURENCE=1(breast)	0.514	NA	3.329
1319	18	72234337	72234337	A	C	intronic	CNDP1	NA	NA	NA	intronic	ENSG00000150656	NA	NA	NA	NA	NA	18q22.3	NA	NA	NA	NA	rs4891562	0.48	0.48	0.465	0.465655	0.671	0.4038	0.5202	0.298	0.5061	0.67	0.34	0.49	0.32	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.013265	NA	NA	NA	NA	NA	0.543	NA	3.329
1319	19	15064858	15064858	A	C	intronic	SLC1A6	NA	NA	NA	intronic	ENSG00000105143	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs2269913	0.73	0.73	0.723	0.757188	0.671	0.7222	0.732	0.8707	0.7464	0.66	0.71	0.72	0.86	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.362601	NA	NA	NA	NA	NA	0.761	NA	3.329
1319	11	89402687	89402687	T	C	intronic	FOLH1B	NA	NA	NA	ncRNA_intronic	ENSG00000134612	NA	NA	NA	NA	NA	11q14.3	NA	NA	NA	NA	rs11018718	0.23	0.23	0.164	0.216454	0.3718	0.1319	0.2435	0.1293	0.2423	0.35	0.13	0.27	0.14	0.3135	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.716907	2.716907	NA	0.319134	0.143798	NA	0.065	NA	3.3288993
1319	9	117108122	117108122	C	T	intronic	AKNA	NA	NA	NA	intronic	ENSG00000106948	NA	NA	NA	NA	NA	9q32	NA	NA	NA	NA	rs3762054	0.18	0.18	0.16	0.184704	0.2247	0.2292	0.2061	0.0537	0.2597	0.22	0.21	0.2	0.06	0.2134	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.220385	NA	NA	0.233372	0.0867	NA	0.174	NA	3.328528
1319	3	108117359	108117359	C	T	intronic	MYH15	NA	NA	NA	intronic	ENSG00000144821	NA	NA	NA	NA	NA	3q13.13	NA	NA	NA	NA	rs71633456	NA	NA	NA	0.572085	0.672	0.4563	0.5807	0.534	0.6339	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.334789	NA	NA	NA	NA	NA	NA	NA	3.328
1319	17	38253228	38253228	T	C	intronic	NR1D1	NA	NA	NA	intronic	ENSG00000126368	NA	NA	NA	NA	NA	17q21.1	NA	NA	NA	NA	rs2102928	0.81	0.81	0.816	0.8127	0.672	0.8284	0.83	0.9826	0.6994	0.68	0.86	0.79	0.97	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.325534	NA	NA	NA	NA	NA	0.746	NA	3.328
1319	19	19454828	19454828	G	A	intronic	MAU2	NA	NA	NA	intronic	ENSG00000129933	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs2965193	0.57	0.57	0.574	0.523762	0.672	0.6677	0.5389	0.3464	0.4519	0.68	0.66	0.55	0.33	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.283383	NA	NA	NA	NA	NA	0.5	NA	3.328
1319	2	27532870	27532870	A	G	intronic	MPV17	NA	NA	NA	intronic	ENSG00000115204	NA	NA	NA	NA	NA	2p23.3	NA	NA	NA	NA	rs62130714	0.23	0.23	0.219	0.270767	0.2068	0.1607	0.3573	0.298	0.3517	0.22	0.13	0.31	0.32	0.2574	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.327067	NA	NA	0.208023	0.262143	NA	0.268	NA	3.327777
1319	12	117595930	117595930	G	A	intronic	FBXO21	NA	NA	NA	intronic	ENSG00000135108	NA	NA	NA	NA	NA	12q24.22	NA	NA	NA	NA	rs2279765	0.21	0.21	0.205	0.222244	0.2177	0.4226	0.1715	0.0272	0.32	0.21	0.38	0.19	0.04	0.2377	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.00221	NA	NA	0.217346	0.056111	NA	0.188	NA	3.327254
1319	3	182858461	182858461	A	G	intronic	LAMP3	NA	NA	NA	intronic	ENSG00000078081	NA	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs831256	0.53	0.53	0.51	0.516973	0.673	0.4722	0.4841	0.3563	0.6431	0.66	0.5	0.5	0.38	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.313151	NA	NA	NA	NA	ID=COSN167097;OCCURENCE=1(large_intestine)	0.478	NA	3.327
1319	5	6605271	6605271	G	A	intronic	NSUN2	NA	NA	NA	intronic	ENSG00000037474	NA	NA	NA	NA	NA	5p15.31	NA	NA	NA	NA	rs506416	0.72	0.72	0.746	0.716853	0.673	0.6736	0.6297	0.8896	0.635	0.66	0.68	0.67	0.89	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.018666	NA	NA	NA	NA	NA	0.746	NA	3.327
1319	11	94203868	94203868	A	T	intronic	MRE11A	NA	NA	NA	intronic	ENSG00000020922	NA	NA	NA	NA	NA	11q21	NA	NA	NA	NA	rs610611	0.71	0.71	0.695	0.724441	0.673	0.7173	0.67	0.7602	0.7751	0.65	0.74	0.7	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.014346	NA	NA	NA	NA	NA	0.638	NA	3.327
1319	12	8376470	8376470	A	G	intronic	FAM90A1	NA	NA	NA	intronic	ENSG00000171847	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs7310126	0.52	0.52	0.523	0.458866	0.673	0.5665	0.5115	0.2103	0.4264	0.68	0.56	0.54	0.23	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.378816	NA	NA	NA	NA	NA	0.442	NA	3.327
1319	16	24883306	24883306	A	C	intronic	SLC5A11	NA	NA	NA	intronic	ENSG00000158865	NA	NA	NA	NA	NA	16p12.1	NA	NA	NA	NA	rs2547037	0.71	0.71	0.678	0.723243	0.673	0.7054	0.8098	0.6838	0.7853	0.65	0.74	0.81	0.71	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.405525	NA	NA	NA	NA	NA	0.732	NA	3.327
1319	17	55962465	55962465	T	C	intronic	CUEDC1	NA	NA	NA	intronic	ENSG00000180891	NA	NA	NA	NA	NA	17q22	NA	NA	NA	NA	rs2586051	0.74	0.74	0.717	0.732628	0.673	0.9931	0.6772	0.5756	0.7771	0.68	1	0.7	0.58	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.079423	NA	NA	NA	NA	NA	0.696	NA	3.327
1319	3	50255663	50255663	C	T	intronic	SLC38A3	NA	NA	NA	ncRNA_intronic	ENSG00000188338	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs35926495	0.18	0.18	0.165	0.159345	0.3519	0.0496	0.2176	0.0182	0.2239	0.35	0.03	0.25	0.03	0.2788	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.234738	NA	NA	0.375665	0.064344	NA	0.138	NA	3.3269683
1319	9	114467478	114467478	T	C	intronic	C9orf84	NA	NA	NA	intronic	ENSG00000165181	NA	NA	NA	NA	NA	9q31.3	NA	NA	NA	NA	rs28545063	0.48	0.48	NA	0.411741	0.4294	0.7113	0.549	0.1467	0.3456	0.44	0.74	0.56	0.18	0.2438	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.285523	NA	NA	NA	NA	NA	0.007	NA	3.3268
1319	7	44561600	44561600	A	G	intronic	NPC1L1	NA	NA	NA	intronic	ENSG00000015520	NA	NA	NA	NA	NA	7p13	NA	NA	NA	NA	rs217421	0.16	0.16	0.149	0.154553	0.2266	0.005	0.1383	0.2489	0.1186	0.21	0.01	0.18	0.25	0.2065	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.26957	NA	NA	0.240233	0.253064	NA	0.167	NA	3.326667
1319	8	124664792	124664792	C	T	exonic	KLHL38	NA	synonymous SNV	KLHL38:NM_001081675:exon1:c.G375A:p.S125S	exonic	ENSG00000175946	NA	synonymous SNV	ENSG00000175946:ENST00000325995:exon1:c.G375A:p.S125S	NA	NA	8q24.13	NA	NA	NA	NA	rs7387544	0.72	0.72	0.742	0.708466	0.8022	0.7113	0.6902	0.6657	0.68	0.8	0.7	0.69	0.64	0.7494	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.561979	NA	NA	0.788499	0.708187	NA	0.797	NA	3.3265676
1319	10	3146155	3146155	C	G	intronic	PFKP	NA	NA	NA	intronic	ENSG00000067057	NA	NA	NA	NA	NA	10p15.2	NA	NA	NA	NA	rs2306293	0.21	0.21	0.188	0.205871	0.2435	0.1478	0.1297	0.2995	0.1544	0.24	0.15	0.15	0.27	0.213	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.75048	NA	NA	0.217093	0.259873	NA	0.239	NA	3.326407
1319	1	116226459	116226459	C	T	intronic	VANGL1	NA	NA	NA	intronic	ENSG00000173218	NA	NA	NA	NA	NA	1p13.1	NA	NA	NA	NA	rs12144356	0.7	0.7	0.702	0.696286	0.674	0.7202	0.7594	0.5976	0.7832	0.68	0.74	0.77	0.62	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.395057	NA	NA	NA	NA	NA	0.71	NA	3.326
1319	5	119016908	119016908	T	C	intergenic	FAM170A,PRR16	dist=45391;dist=783111	NA	NA	downstream	ENSG00000234259	NA	NA	NA	NA	NA	5q23.1	NA	NA	NA	NA	rs874886	0.13	0.13	0.129	0.138778	0.174	0.0804	0.1138	0.1104	0.2188	0.18	0.07	0.13	0.12	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.558773	NA	NA	NA	NA	NA	0.101	NA	3.326
1319	8	2040415	2040415	G	A	intronic	MYOM2	NA	NA	NA	intronic	ENSG00000036448	NA	NA	NA	NA	NA	8p23.3	NA	NA	NA	NA	rs893877	0.57	0.57	0.528	0.574681	0.674	0.6488	0.7493	0.2171	0.7556	0.66	0.63	0.76	0.22	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.257942	NA	NA	NA	NA	NA	0.63	NA	3.326
1319	9	84674796	84674796	A	G	intergenic	SPATA31D1,RASEF	dist=64625;dist=919704	NA	NA	ncRNA_exonic	ENSG00000231649	NA	NA	NA	NA	NA	9q21.32	NA	NA	NA	NA	rs10867829	0.84	0.84	0.82	0.857827	0.674	0.999	0.8184	0.9841	0.7587	0.67	1	0.79	0.98	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.159486	NA	NA	NA	NA	NA	0.71	NA	3.326
1319	16	105325	105325	G	A	intronic	SNRNP25	NA	NA	NA	intronic	ENSG00000161981	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs2858042	0.57	0.57	0.514	0.547125	0.674	0.6002	0.5821	0.3585	0.592	0.68	0.56	0.62	0.36	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.487724	NA	NA	NA	NA	NA	0.565	NA	3.326
1319	3	148562425	148562425	C	G	intronic	CPB1	NA	NA	NA	intronic	ENSG00000153002	NA	NA	NA	NA	NA	3q24	NA	NA	NA	NA	rs9835098	0.21	0.21	0.202	0.199281	0.2306	0.249	0.2118	0.1679	0.1493	0.22	0.25	0.2	0.17	0.2135	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.483887	NA	NA	0.230286	0.169542	NA	0.196	NA	3.325614
1319	8	1817314	1817314	G	C	intronic	ARHGEF10	NA	NA	NA	intronic	ENSG00000104728	NA	NA	NA	NA	NA	8p23.3	NA	NA	NA	NA	rs7003839	0.24	0.24	0.231	0.198482	0.2157	0.3681	0.2003	0.0794	0.1656	0.23	0.41	0.19	0.09	0.223	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.344018	NA	NA	0.235698	0.098729	NA	0.167	NA	3.325602
1319	16	74921661	74921661	A	T	intronic	WDR59	NA	NA	NA	intronic	ENSG00000103091	NA	NA	NA	NA	NA	16q23.1	NA	NA	NA	NA	rs9940014	0.17	0.17	0.175	0.161142	0.2366	0.0198	0.1398	0.233	0.1472	0.23	0.01	0.16	0.26	0.2049	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.554794	NA	NA	0.233023	0.227025	NA	0.174	NA	3.325477
1319	11	104846195	104846195	C	T	intergenic	CASP4,CASP5	dist=6870;dist=18772	NA	NA	intergenic	ENSG00000196954,ENSG00000137757	dist=6032;dist=18767	NA	NA	NA	NA	11q22.3	NA	NA	NA	NA	rs151335900	0.01	0.01	0.004	0.00539137	0.008	0.001	0.0144	0.0008	0.0072	0.01	0.0017	0.01	NA	NA	0.011	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.014214	NA	NA	NA	NA	NA	0.007	NA	3.3253334
1319	1	116225180	116225180	A	C	intronic	VANGL1	NA	NA	NA	intronic	ENSG00000173218	NA	NA	NA	NA	NA	1p13.1	NA	NA	NA	NA	rs10923177	0.68	0.68	0.648	0.680511	0.675	0.7202	0.7522	0.5393	0.7853	0.68	0.74	0.76	0.54	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.696889	NA	NA	NA	NA	NA	0.71	NA	3.325
1319	11	133994276	133994276	G	A	intronic	JAM3	NA	NA	NA	intronic	ENSG00000166086	NA	NA	NA	NA	NA	11q25	NA	NA	NA	NA	rs470952	0.84	0.84	0.845	0.854233	0.675	0.9544	0.8646	0.9629	0.7812	0.68	0.96	0.87	0.96	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.328849	NA	NA	NA	NA	NA	0.87	NA	3.325
1319	13	103339194	103339194	G	A	intronic	METTL21C	NA	NA	NA	intronic	ENSG00000139780	NA	NA	NA	NA	NA	13q33.1	NA	NA	NA	NA	rs641652	0.62	0.62	0.654	0.590855	0.675	0.5605	0.5403	0.5696	0.6002	0.7	0.6	0.57	0.56	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.320382	NA	NA	NA	NA	NA	0.616	NA	3.325
1319	14	94109829	94109829	G	A	intronic	UNC79	NA	NA	NA	intronic	ENSG00000133958	NA	NA	NA	NA	NA	14q32.12	NA	NA	NA	NA	rs943318	0.56	0.56	0.551	0.538139	0.675	0.3938	0.6801	0.4478	0.5675	0.68	0.4	0.72	0.46	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.222878	NA	NA	NA	NA	NA	0.638	NA	3.325
1319	18	8798374	8798374	G	A	intronic	SOGA2	NA	NA	NA	intronic	ENSG00000168502	NA	NA	NA	NA	NA	18p11.22	NA	NA	NA	NA	rs606431	0.68	0.68	0.67	0.662141	0.675	0.5913	0.8141	0.7103	0.5491	0.66	0.6	0.8	0.72	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.324546	NA	NA	NA	NA	NA	0.551	NA	3.325
1320	12	132962932	132962932	G	C	intergenic	GALNT9,FBRSL1	dist=57027;dist=104225	NA	NA	intergenic	ENSG00000255916,ENSG00000256783	dist=54771;dist=70814	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs77940778	0.05	0.05	0.025	0.0601038	0.0089	0.1409	0.0893	0.0008	0.089	0.01	0.13	0.1	0.002	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.892268	NA	NA	NA	NA	NA	NA	NA	3.3244334
1320	1	16959101	16959101	C	T	intergenic	CROCCP2,MST1P2	dist=1700;dist=12968	NA	NA	ncRNA_intronic	ENSG00000215908	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs698884	NA	NA	0.754	0.755791	0.6759	0.8661	0.7061	0.8374	0.6493	NA	NA	NA	NA	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.776058	NA	NA	NA	NA	NA	0.659	NA	3.3241
1320	14	106926060	106926060	C	A	intergenic	LINC00226,LINC00221	dist=181094;dist=12395	NA	NA	downstream	ENSG00000232216	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs4977151	0.1	0.1	0.08	0.0870607	0.1759	NA	0.0893	0.1112	0.0511	0.18	0.0017	0.09	0.11	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.907171	NA	NA	NA	NA	NA	0.094	NA	3.3241
1320	17	37829570	37829570	C	G	intronic	PGAP3	NA	NA	NA	intronic	ENSG00000161395	NA	NA	NA	NA	NA	17q12	NA	NA	NA	NA	rs903504	0.48	0.48	0.455	0.475639	0.6759	0.4018	0.5086	0.2337	0.6493	0.65	0.45	0.51	0.21	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.681685	NA	NA	NA	NA	NA	NA	NA	3.3241
1320	17	37829571	37829571	C	A	intronic	PGAP3	NA	NA	NA	intronic	ENSG00000161395	NA	NA	NA	NA	NA	17q12	NA	NA	NA	NA	rs903503	0.48	0.48	0.449	0.475639	0.6759	0.4018	0.5086	0.2337	0.6493	0.65	0.45	0.51	0.21	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.344367	NA	NA	NA	NA	NA	NA	NA	3.3241
1320	17	37829604	37829604	C	T	intronic	PGAP3	NA	NA	NA	intronic	ENSG00000161395	NA	NA	NA	NA	NA	17q12	NA	NA	NA	NA	rs903502	0.5	0.5	0.495	0.474641	0.6759	0.4018	0.5072	0.23	0.6503	0.68	0.48	0.52	0.23	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.239822	3.239822	NA	NA	NA	NA	0.493	NA	3.3241
1320	2	198263146	198263146	T	C	intronic	SF3B1	NA	NA	NA	intronic	ENSG00000115524	NA	NA	NA	NA	NA	2q33.1	NA	NA	NA	NA	rs16865262	0.2	0.2	0.212	0.157348	0.2505	0.25	0.1916	0.0507	0.0859	0.24	0.27	0.2	0.05	0.1988	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.918496	NA	NA	0.227209	0.089424	NA	0.123	NA	3.323491
1320	3	190106242	190106242	T	C	intronic	CLDN16	NA	NA	NA	intronic	ENSG00000113946	NA	NA	NA	NA	NA	3q28	NA	NA	NA	NA	rs1491994	0.14	0.14	0.134	0.117212	0.2336	0.0208	0.1455	0.0681	0.1431	0.23	0.03	0.19	0.09	0.1949	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.807171	NA	NA	0.248023	0.087608	NA	0.203	NA	3.323477
1320	14	89307320	89307320	T	C	intronic	TTC8	NA	NA	NA	intronic	ENSG00000165533	NA	NA	NA	NA	NA	14q31.3	NA	NA	NA	NA	rs17700296	0.21	0.21	0.194	0.188698	0.2207	0.3304	0.2061	0.0779	0.1472	0.23	0.32	0.22	0.07	0.2115	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.477911	NA	NA	0.244419	0.108261	NA	0.225	NA	3.323381
1320	6	152555112	152555112	C	T	intronic	SYNE1	NA	NA	NA	intronic	ENSG00000131018	NA	NA	NA	NA	NA	6q25.2	NA	NA	NA	NA	rs2296254	0.22	0.22	0.173	0.208866	0.2227	0.2401	0.4049	0.0514	0.2362	0.21	0.24	0.38	0.08	0.2374	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.890225	NA	NA	0.216744	0.075125	ID=COSN167908;OCCURENCE=2(large_intestine),1(endometrium)	0.225	NA	3.323156
1320	3	53806803	53806803	G	C	intronic	CACNA1D	NA	NA	NA	intronic	ENSG00000157388	NA	NA	NA	NA	NA	3p21.1	NA	NA	NA	NA	rs2278517	0.59	0.59	0.589	0.545927	0.6769	0.3323	0.6153	0.7269	0.3374	0.69	0.31	0.62	0.73	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.289272	NA	NA	NA	NA	NA	0.63	NA	3.3231
1320	6	76063133	76063133	A	G	intronic	FILIP1	NA	NA	NA	intronic	ENSG00000118407	NA	NA	NA	NA	NA	6q14.1	NA	NA	NA	NA	rs6913979	0.61	0.61	0.625	0.635982	0.6769	0.4821	0.6095	0.6997	0.6851	0.68	0.45	0.63	0.67	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.487484	NA	NA	NA	NA	NA	0.674	NA	3.3231
1320	11	49401125	49401125	T	G	intergenic	FOLH1,LOC440040	dist=170903;dist=178955	NA	NA	ncRNA_exonic	ENSG00000255532	NA	NA	NA	NA	NA	11p11.12	NA	NA	NA	NA	rs7102702	0.7	0.7	0.659	0.696885	0.6769	0.7212	0.7882	0.5877	0.7751	0.68	0.73	0.79	0.61	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.39235	NA	NA	NA	NA	NA	0.565	NA	3.3231
1320	16	28631585	28631585	T	G	intronic	SULT1A1	NA	NA	NA	intronic	ENSG00000196502	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs1968752	0.69	0.69	0.666	0.675719	0.6769	0.9256	0.5634	0.4592	0.7894	0.66	0.91	0.65	0.49	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.408005	NA	NA	NA	NA	NA	0.754	NA	3.3231
1320	10	90497588	90497588	A	G	intronic	LIPK	NA	NA	NA	intronic	ENSG00000204021	NA	NA	NA	NA	NA	10q23.31	NA	NA	NA	NA	rs444764	0.24	0.24	0.238	0.25619	0.2137	0.3502	0.2896	0.1959	0.2607	0.21	0.35	0.23	0.17	0.2386	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.485055	NA	NA	0.224669	0.195281	NA	0.152	NA	3.323031
1320	19	43883124	43883124	C	T	intergenic	CD177,TEX101	dist=15644;dist=9639	NA	NA	ncRNA_intronic	ENSG00000204933	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs4803622	0.23	0.23	0.234	0.223442	0.3698	0.0784	0.3847	0.1392	0.2219	0.36	0.08	0.36	0.14	0.3073	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.667796	NA	NA	NA	NA	NA	0.261	NA	3.3229
1320	14	36244815	36244815	C	A	intronic	RALGAPA1	NA	NA	NA	intronic	ENSG00000174373	NA	NA	NA	NA	NA	14q13.2	NA	NA	NA	NA	rs7142261	0.44	0.44	0.447	0.473043	0.1899	0.5784	0.2277	0.7557	0.4479	0.19	0.61	0.29	0.72	0.3116	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.321438	1.321438	NA	0.175638	0.658459	NA	0.399	NA	3.322862
1320	5	145532859	145532859	T	C	intronic	LARS	NA	NA	NA	intronic	ENSG00000133706	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs17500483	0.26	0.26	0.242	0.253594	0.328	0.1984	0.4236	0.1672	0.2301	0.33	0.2	0.35	0.16	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.574834	NA	NA	0.349466	0.209538	ID=COSN167584;OCCURENCE=1(large_intestine)	0.348	NA	3.322534
1320	7	142028118	142028118	C	A	intergenic	LOC730441,MTRNR2L6	dist=56050;dist=346013	NA	NA	upstream	ENSG00000211706	NA	NA	NA	NA	NA	7q34	NA	NA	Name=12	NA	rs361429	0.4	0.4	0.353	0.344449	0.5815	0.371	0.3689	0.1498	0.319	0.6	0.35	0.37	0.17	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.25259	NA	NA	0.596166	0.223988	NA	0.275	NA	3.322334
1320	3	11276399	11276399	T	C	intronic	HRH1	NA	NA	NA	intronic	ENSG00000196639	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs347614	0.67	0.67	0.675	0.641174	0.6779	0.6865	0.5259	0.6732	0.5951	0.69	0.69	0.59	0.68	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.585324	NA	NA	NA	NA	NA	0.659	NA	3.3221
1320	6	4979405	4979405	T	C	intergenic	CDYL,RPP40	dist=23627;dist=15875	NA	NA	ncRNA_exonic	ENSG00000217030	NA	NA	NA	NA	NA	6p25.1	NA	NA	NA	NA	rs2764180	0.76	0.76	0.758	0.757788	0.6779	0.9802	0.7104	0.6808	0.7485	0.68	0.99	0.71	0.67	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.32768	NA	NA	NA	NA	NA	0.783	NA	3.3221
1320	6	32427512	32427512	C	T	intergenic	HLA-DRA,HLA-DRB5	dist=14686;dist=57642	NA	NA	downstream	ENSG00000196301	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs28732232	0.12	0.12	0.098	0.121006	0.1779	0.0516	0.1138	0.0991	0.1687	0.18	0.05	0.12	0.11	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.697286	NA	NA	NA	NA	NA	0.116	NA	3.3221
1320	10	124329580	124329580	C	A	intronic	DMBT1	NA	NA	NA	intronic	ENSG00000187908	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs11524819	0.71	0.71	0.686	0.704273	0.6779	0.7748	0.7867	0.6097	0.728	0.7	0.77	0.78	0.59	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.149013	NA	NA	NA	NA	NA	0.739	NA	3.3221
1320	11	49007360	49007360	G	C	intergenic	OR4A47,TRIM49B	dist=496086;dist=45792	NA	NA	downstream	ENSG00000254764	NA	NA	NA	NA	NA	11p11.12	NA	NA	NA	NA	rs11040205	0.19	0.19	0.17	0.196286	0.1779	0.1667	0.1527	0.2988	0.138	0.17	0.16	0.15	0.28	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.728856	NA	NA	NA	NA	NA	0.246	NA	3.3221
1320	5	75997069	75997069	C	T	intronic	IQGAP2	NA	NA	NA	ncRNA_intronic	ENSG00000225407	NA	NA	NA	NA	NA	5q13.3	NA	NA	NA	NA	rs2307123	0.29	0.29	0.272	0.275759	0.3618	0.2837	0.2637	0.2776	0.1851	0.35	0.27	0.27	0.25	0.3059	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.540957	NA	NA	0.343605	0.277803	NA	0.152	NA	3.3220283
1320	16	15221957	15221957	T	C	intergenic	RRN3,MIR3180-4	dist=33799;dist=26750	NA	NA	ncRNA_exonic	ENSG00000188599,ENSG00000250251,ENSG00000270580	NA	NA	NA	Score=572;Name=lod=282	NA	16p13.11	NA	NA	NA	NA	rs9923527	0.74	0.74	0.62	0.74381	0.8489	0.7312	0.8991	0.5499	0.8006	0.83	0.7	0.88	0.55	0.8293	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.114759	NA	1	NA	NA	NA	0.029	NA	3.3218
1320	2	37415496	37415496	G	C	intronic	SULT6B1	NA	NA	NA	intronic	ENSG00000138068	NA	NA	NA	NA	NA	2p22.2	NA	NA	NA	NA	rs11124566	0.7	0.7	0.66	0.671126	0.6789	0.9087	0.7637	0.4213	0.6902	0.68	0.92	0.79	0.41	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.482021	NA	NA	NA	NA	NA	0.667	NA	3.3211
1320	7	56122898	56122898	T	C	intronic	CCT6A	NA	NA	NA	intronic	ENSG00000146731	NA	NA	NA	NA	NA	7p11.2	NA	NA	NA	NA	rs6958480	0.67	0.67	0.638	0.642772	0.6789	0.7103	0.6614	0.5983	0.5828	0.69	0.71	0.65	0.61	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.910216	NA	NA	NA	NA	NA	0.688	NA	3.3211
1320	10	124328010	124328010	A	G	intronic	DMBT1	NA	NA	NA	intronic	ENSG00000187908	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs2981779	0.68	0.68	0.663	0.688898	0.6789	0.7728	0.7767	0.5582	0.727	0.69	0.77	0.76	0.52	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.026194	NA	NA	NA	NA	NA	0.732	NA	3.3211
1320	10	124328080	124328080	A	T	intronic	DMBT1	NA	NA	NA	intronic	ENSG00000187908	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs2981780	0.68	0.68	0.661	0.688898	0.6789	0.7728	0.7767	0.5582	0.727	0.69	0.77	0.76	0.52	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.440023	NA	NA	NA	NA	NA	0.732	NA	3.3211
1320	10	124329583	124329583	G	A	intronic	DMBT1	NA	NA	NA	intronic	ENSG00000187908	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs11524820	0.71	0.71	0.691	0.705671	0.6789	0.7758	0.7882	0.612	0.729	0.7	0.77	0.78	0.59	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.627642	NA	NA	NA	NA	NA	0.739	NA	3.3211
1320	10	124329801	124329801	G	A	intronic	DMBT1	NA	NA	NA	intronic	ENSG00000187908	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs3740223	0.7	0.7	0.668	0.705072	0.6789	0.7728	0.7882	0.612	0.729	0.69	0.77	0.78	0.58	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.309933	NA	NA	NA	NA	NA	0.739	NA	3.3211
1320	10	124329866	124329866	A	C	intronic	DMBT1	NA	NA	NA	intronic	ENSG00000187908	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs3740224	0.7	0.7	0.667	0.70607	0.6789	0.7768	0.7882	0.6127	0.729	0.69	0.77	0.78	0.58	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.459916	NA	NA	NA	NA	NA	0.739	NA	3.3211
1320	10	124331722	124331722	T	C	intronic	DMBT1	NA	NA	NA	intronic	ENSG00000187908	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs2981801	0.7	0.7	0.656	0.705671	0.6789	0.7758	0.7882	0.612	0.729	0.69	0.77	0.78	0.58	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.327835	NA	NA	NA	NA	NA	0.739	NA	3.3211
1320	10	124331957	124331957	T	C	intronic	DMBT1	NA	NA	NA	intronic	ENSG00000187908	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs2277230	0.7	0.7	0.68	0.705671	0.6789	0.7758	0.7882	0.612	0.729	0.69	0.77	0.78	0.58	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.199275	NA	NA	NA	NA	NA	0.732	NA	3.3211
1320	10	124331963	124331963	A	G	intronic	DMBT1	NA	NA	NA	intronic	ENSG00000187908	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs2277231	0.7	0.7	0.69	0.705671	0.6789	0.7758	0.7882	0.612	0.729	0.69	0.77	0.78	0.58	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.105561	NA	NA	NA	NA	NA	0.739	NA	3.3211
1320	10	124332035	124332035	T	C	intronic	DMBT1	NA	NA	NA	intronic	ENSG00000187908	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs2277232	0.7	0.7	0.68	0.705671	0.6789	0.7758	0.7882	0.612	0.729	0.69	0.77	0.78	0.58	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.146479	NA	NA	NA	NA	NA	0.739	NA	3.3211
1320	19	12766370	12766370	G	A	intronic	MAN2B1	NA	NA	NA	intronic	ENSG00000104774	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs8107642	0.41	0.41	0.392	0.365815	0.6789	0.1558	0.5029	0.1989	0.3885	0.67	0.15	0.54	0.21	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.540994	NA	NA	NA	NA	NA	0.536	NA	3.3211
1320	19	48260079	48260079	T	C	intronic	GLTSCR2	NA	NA	NA	intronic	ENSG00000105373	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs889142	0.69	0.69	0.688	0.711661	0.6789	0.5556	0.6888	0.8517	0.7331	0.68	0.55	0.69	0.87	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.520168	NA	NA	NA	NA	NA	0.848	NA	3.3211
1320	17	3649214	3649214	G	A	exonic	ITGAE	NA	synonymous SNV	ITGAE:NM_002208:exon18:c.C2163T:p.R721R	exonic	ENSG00000083457	NA	synonymous SNV	ENSG00000083457:ENST00000263087:exon18:c.C2163T:p.R721R	NA	NA	17p13.2	NA	NA	NA	NA	rs1183610	0.75	0.75	0.763	0.715056	0.831	0.4524	0.8271	0.9244	0.5041	0.83	0.48	0.81	0.92	0.7253	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.04025	NA	NA	0.789302	0.909669	NA	0.768	NA	3.3210646
1320	2	127453479	127453479	G	A	intronic	GYPC	NA	NA	NA	intronic	ENSG00000136732	NA	NA	NA	NA	NA	2q14.3	NA	NA	NA	NA	rs4538146	0.36	0.36	0.367	0.321885	0.2167	0.4276	0.3732	0.4387	0.1268	0.22	0.46	0.34	0.48	0.2481	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.802879	NA	NA	0.214651	0.389469	NA	0.326	NA	3.320549
1320	1	12628471	12628471	A	C	intronic	DHRS3	NA	NA	NA	intronic	ENSG00000162496	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs4072868	0.12	0.12	0.101	0.110224	0.2465	0.0159	0.098	0.0295	0.1851	0.26	0.02	0.11	0.03	0.1892	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.640474	NA	NA	0.243953	0.063096	NA	0.181	NA	3.320347
1320	2	158067082	158067082	G	A	intergenic	GPD2,GALNT5	dist=624167;dist=47258	NA	NA	downstream	ENSG00000213194	NA	NA	NA	NA	NA	2q24.1	NA	NA	NA	NA	rs196394	0.28	0.28	0.302	0.300519	0.1799	0.0942	0.1758	0.7073	0.1759	0.17	0.08	0.18	0.75	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.285741	NA	NA	NA	NA	NA	0.254	NA	3.3201
1320	6	30551286	30551286	A	G	intronic	ABCF1	NA	NA	NA	intronic	ENSG00000204574	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs1264440	0.68	0.68	0.677	0.714058	0.6799	0.6746	0.5937	0.7292	0.8548	0.69	0.69	0.59	0.71	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.469001	2.469001	NA	NA	NA	NA	0.775	NA	3.3201
1320	11	49003362	49003362	G	A	intergenic	OR4A47,TRIM49B	dist=492088;dist=49790	NA	NA	upstream	ENSG00000220948	NA	NA	NA	NA	NA	11p11.12	NA	NA	NA	NA	rs11608048	0.25	0.25	0.168	0.273363	0.1799	0.4028	0.2378	0.1195	0.4693	0.21	0.37	0.24	0.17	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.279857	NA	NA	NA	NA	NA	0.167	NA	3.3201
1320	13	25183166	25183166	C	T	intergenic	TPTE2P6,ATP12A	dist=11354;dist=71383	NA	NA	upstream	ENSG00000211508	NA	NA	NA	NA	NA	13q12.12	NA	NA	NA	NA	rs117034113	0.09	0.09	0.064	0.0605032	0.1799	NA	0.1282	0.0091	0.0215	0.17	NA	0.14	0.01	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.746274	NA	NA	NA	NA	NA	0.043	NA	3.3201
1320	15	74560566	74560566	C	T	intronic	CCDC33	NA	NA	NA	intronic	ENSG00000140481	NA	NA	NA	NA	NA	15q24.1	NA	NA	NA	NA	rs1038436	0.47	0.47	0.472	0.407947	0.6799	0.5595	0.4193	0.0545	0.4417	0.67	0.55	0.46	0.06	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.780714	NA	NA	NA	NA	NA	0.457	NA	3.3201
1320	19	6820951	6820951	C	T	intronic	VAV1	NA	NA	NA	intronic	ENSG00000141968	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs164016	0.66	0.66	0.687	0.651158	0.6799	0.5278	0.6153	0.7791	0.6012	0.67	0.57	0.62	0.77	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.334645	NA	NA	NA	NA	NA	0.783	NA	3.3201
1320	10	13099843	13099843	G	T	intergenic	CCDC3,OPTN	dist=56139;dist=42239	NA	NA	intronic	ENSG00000151468	NA	NA	NA	NA	NA	10p13	NA	NA	NA	NA	rs519279	0.33	0.33	0.32	0.284345	0.3469	0.126	0.3487	0.4092	0.1687	0.36	0.14	0.41	0.42	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.882546	NA	NA	NA	NA	NA	0.333	NA	3.3197667
1320	9	129595895	129595895	T	C	exonic	ZBTB43	NA	synonymous SNV	ZBTB43:NM_001135776:exon2:c.T1107C:p.T369T,ZBTB43:NM_014007:exon3:c.T1107C:p.T369T	exonic	ENSG00000169155	NA	synonymous SNV	ENSG00000169155:ENST00000373457:exon1:c.T1107C:p.T369T,ENSG00000169155:ENST00000449886:exon2:c.T1107C:p.T369T,ENSG00000169155:ENST00000373464:exon3:c.T1107C:p.T369T	NA	NA	9q33.3	NA	NA	NA	NA	rs3118994	0.83	0.83	0.85	0.842452	0.7753	0.9732	0.6614	0.8525	0.8916	0.76	0.97	0.73	0.85	0.7949	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.420804	NA	NA	0.77686	0.84453	NA	0.797	NA	3.3196066
1320	12	48880550	48880550	T	C	intronic	C12orf54	NA	NA	NA	ncRNA_intronic	ENSG00000258121	NA	NA	NA	NA	NA	12q13.11	NA	NA	NA	NA	rs2731092	0.29	0.29	0.294	0.305112	0.3449	0.1647	0.2853	0.3759	0.3272	0.33	0.17	0.28	0.38	0.3127	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.131418	NA	NA	0.356395	0.345211	NA	0.319	NA	3.3193383
1320	1	40207169	40207169	T	G	intronic	PPIE	NA	NA	NA	intronic	ENSG00000084072	NA	NA	NA	NA	NA	1p34.2	NA	NA	NA	NA	rs497333	0.6	0.6	0.58	0.573283	0.6809	0.4633	0.5375	0.5446	0.6401	0.7	0.49	0.59	0.6	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.823184	NA	NA	NA	NA	NA	0.696	NA	3.3191
1320	8	47505224	47505224	C	T	intergenic	NONE,LINC00293	dist=NONE;dist=247284	NA	NA	ncRNA_intronic	ENSG00000248498	NA	NA	NA	NA	NA	8q11.1	NA	NA	NA	NA	rs4872670	0.52	0.52	0.461	0.418331	0.6809	0.6121	0.5259	0.0651	0.3497	0.69	0.64	0.58	0.07	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.668182	NA	NA	NA	NA	NA	0.522	NA	3.3191
1320	8	47507683	47507683	A	G	intergenic	NONE,LINC00293	dist=NONE;dist=244825	NA	NA	ncRNA_exonic	ENSG00000248498	NA	NA	NA	NA	NA	8q11.1	NA	NA	NA	NA	rs13276733	0.52	0.52	0.465	0.418331	0.6809	0.6121	0.5259	0.0651	0.3497	0.69	0.64	0.58	0.07	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.68476	NA	NA	NA	NA	NA	0.522	NA	3.3191
1320	14	51172219	51172219	C	A	intergenic	SAV1,NIN	dist=37148;dist=14262	NA	NA	ncRNA_exonic	ENSG00000258491	NA	NA	NA	NA	NA	14q22.1	NA	NA	NA	NA	rs10144234	0.82	0.82	0.804	0.823283	0.6809	0.87	0.7968	0.9652	0.7485	0.7	0.87	0.81	0.97	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.210589	NA	NA	NA	NA	NA	0.913	NA	3.3191
1320	16	58320211	58320211	T	C	intronic	PRSS54	NA	NA	NA	intronic	ENSG00000103023	NA	NA	NA	NA	NA	16q21	NA	NA	NA	NA	rs4784916	0.69	0.69	0.699	0.692292	0.6809	0.5853	0.5605	0.9244	0.5941	0.69	0.55	0.59	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.045834	NA	NA	NA	NA	NA	0.783	NA	3.3191
1320	5	75997063	75997063	A	G	intronic	IQGAP2	NA	NA	NA	ncRNA_intronic	ENSG00000225407	NA	NA	NA	NA	NA	5q13.3	NA	NA	NA	NA	rs2307124	0.3	0.3	0.282	0.284345	0.3618	0.2837	0.268	0.3079	0.1851	0.35	0.27	0.27	0.27	0.3092	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.546041	NA	NA	0.343256	0.311167	NA	0.159	NA	3.3190773
1320	1	177906657	177906657	G	A	intronic	SEC16B	NA	NA	NA	intronic	ENSG00000120341,ENSG00000254154	NA	NA	NA	NA	NA	1q25.2	NA	NA	NA	NA	rs6676302	0.21	0.21	0.186	0.241813	0.1879	0.25	0.2003	0.27	0.2802	0.18	0.2	0.22	0.25	0.2956	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.582547	NA	NA	0.19797	0.242518	NA	0.21	NA	3.31853
1320	2	132290399	132290399	G	A	ncRNA_intronic	RNU6-81P	NA	NA	NA	intronic	ENSG00000163040	NA	NA	NA	NA	NA	2q21.1	NA	NA	NA	NA	rs34096718	0.51	0.51	0.525	0.539537	0.3211	0.6815	0.5418	0.7057	0.3916	0.29	0.66	0.48	0.71	0.3964	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.238373	NA	NA	0.297627	0.630336	NA	0.246	NA	3.3182063
1320	6	109980317	109980317	G	A	intronic	AK9	NA	NA	NA	intronic	ENSG00000155085	NA	NA	NA	NA	NA	6q21	NA	NA	NA	NA	rs4947004	0.78	0.78	0.758	0.806709	0.6819	0.9901	0.8112	0.7118	0.8712	0.68	0.99	0.76	0.72	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.127951	NA	NA	NA	NA	NA	0.717	NA	3.3181
1320	8	139153374	139153374	G	C	intronic	FAM135B	NA	NA	NA	intronic	ENSG00000147724	NA	NA	NA	NA	NA	8q24.23	NA	NA	NA	NA	rs4909738	0.72	0.72	0.703	0.714058	0.6819	0.751	0.745	0.6793	0.7342	0.68	0.77	0.71	0.72	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.522997	NA	NA	NA	NA	NA	0.79	NA	3.3181
1320	14	78023519	78023519	C	G	intronic	SPTLC2	NA	NA	NA	intronic	ENSG00000100596	NA	NA	NA	NA	NA	14q24.3	NA	NA	Name=5	NA	rs2272587	0.53	0.53	0.504	0.480032	0.5726	0.8839	0.4496	0.0961	0.5092	0.56	0.9	0.46	0.08	0.5355	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.506661	NA	NA	0.574535	0.182705	NA	0.457	NA	3.317365
1320	18	21883552	21883552	G	A	intronic	OSBPL1A	NA	NA	NA	intronic	ENSG00000141447	NA	NA	NA	NA	NA	18q11.2	NA	NA	NA	NA	rs1487377	0.25	0.25	0.255	0.255791	0.2346	0.0625	0.1585	0.5189	0.1902	0.25	0.06	0.2	0.5	0.2226	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.103075	NA	NA	0.225581	0.469587	NA	0.297	NA	3.317219
1320	1	111854207	111854207	T	C	intronic	CHIA	NA	NA	NA	intronic	ENSG00000134216	NA	NA	NA	NA	NA	1p13.2	NA	NA	NA	NA	rs4839122	0.72	0.72	0.698	0.686701	0.6829	0.8442	0.8084	0.5522	0.6237	0.68	0.85	0.78	0.6	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.080478	NA	NA	NA	NA	NA	0.58	NA	3.3171
1320	18	57115133	57115133	T	C	intronic	CCBE1	NA	NA	NA	intronic	ENSG00000183287	NA	NA	NA	NA	NA	18q21.32	NA	NA	NA	NA	rs3809990	0.66	0.66	0.664	0.694289	0.6829	0.7341	0.6095	0.6263	0.817	0.68	0.71	0.6	0.62	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.576741	NA	NA	NA	NA	NA	0.732	NA	3.3171
1320	7	77755197	77755197	A	G	intronic	MAGI2	NA	NA	NA	intronic	ENSG00000187391	NA	NA	NA	NA	NA	7q21.11	NA	NA	NA	NA	rs2023946	0.23	0.23	0.206	0.222843	0.2286	0.2262	0.2983	0.1921	0.2014	0.22	0.24	0.28	0.18	0.2308	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.985965	NA	NA	0.223825	0.203132	NA	0.225	NA	3.316775
1320	4	68812283	68812283	C	T	exonic	TMPRSS11A	NA	synonymous SNV	TMPRSS11A:NM_001114387:exon2:c.G18A:p.V6V,TMPRSS11A:NM_182606:exon2:c.G18A:p.V6V	exonic	ENSG00000187054	NA	synonymous SNV	ENSG00000187054:ENST00000334830:exon2:c.G18A:p.V6V,ENSG00000187054:ENST00000396188:exon2:c.G18A:p.V6V,ENSG00000187054:ENST00000508048:exon2:c.G15A:p.V5V	NA	NA	4q13.2	NA	NA	NA	NA	rs11930532	0.65	0.65	0.634	0.620807	0.7843	0.8105	0.6037	0.2458	0.7761	0.79	0.81	0.66	0.26	0.7371	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.10194	NA	NA	0.828605	0.33636	NA	0.623	NA	3.3166616
1320	8	10583203	10583203	A	G	UTR3	SOX7	NM_031439:c.*45T>C	NA	NA	UTR3	ENSG00000171056,ENSG00000258724	ENST00000304501:c.*45T>C,ENST00000553390:c.*45T>C;ENST00000554914:c.*45T>C	NA	NA	NA	NA	8p23.1	NA	NA	Name=3	NA	rs10110624	0.63	0.63	0.664	0.64996	0.6879	0.3423	0.5893	0.8585	0.6892	0.69	0.36	0.62	0.87	0.6501	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.948076	NA	NA	0.678879	0.822434	NA	0.696	NA	3.3164544
1320	12	59246581	59246581	T	G	intergenic	XRCC6BP1,LRIG3	dist=895529;dist=19356	NA	NA	intergenic	ENSG00000258231,ENSG00000139263	dist=39739;dist=19350	NA	NA	NA	NA	12q14.1	NA	NA	NA	NA	rs114750263	0.02	0.02	0.018	0.0345447	0.0169	NA	0.0173	0.0507	0.0787	0.01	NA	0.02	0.05	NA	0.05	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.660801	NA	NA	NA	NA	NA	0.014	NA	3.3164334
1320	1	41454425	41454425	G	A	intronic	CTPS1	NA	NA	NA	intronic	ENSG00000171793	NA	NA	NA	NA	NA	1p34.2	NA	NA	NA	NA	rs6675122	0.17	0.17	0.156	0.151158	0.2336	0.0476	0.1599	0.205	0.0941	0.23	0.05	0.19	0.21	0.2052	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.523685	NA	NA	0.244767	0.200182	NA	0.268	NA	3.316433
1320	4	37841430	37841430	C	T	intronic	PGM2	NA	NA	NA	intronic	ENSG00000169299	NA	NA	NA	NA	NA	4p14	NA	NA	NA	NA	rs2261414	0.33	0.33	0.344	0.350839	0.2167	0.3046	0.281	0.6755	0.1472	0.21	0.26	0.27	0.64	0.2546	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.25903	1.25903	NA	0.212326	0.608942	NA	0.413	NA	3.316374
1320	3	121366123	121366123	C	T	intronic	HCLS1	NA	NA	NA	intronic	ENSG00000180353	NA	NA	NA	NA	NA	3q13.33	NA	NA	NA	NA	rs9818402	0.22	0.22	0.204	0.23123	0.2187	0.2778	0.1744	0.1838	0.3006	0.22	0.3	0.18	0.16	0.2374	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.587248	NA	NA	0.227674	0.209714	NA	0.203	NA	3.316226
1320	1	75108863	75108863	A	C	intronic	C1orf173	NA	NA	NA	intronic	ENSG00000178965	NA	NA	NA	NA	NA	1p31.1	NA	NA	NA	NA	rs623171	0.65	0.65	0.672	0.674521	0.6839	0.3919	0.7061	0.8843	0.6503	0.68	0.37	0.74	0.88	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.107949	NA	NA	NA	NA	NA	0.71	NA	3.3161
1320	3	45764544	45764544	T	C	intronic	SACM1L	NA	NA	NA	intronic	ENSG00000211456	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs2742449	0.57	0.57	0.568	0.545527	0.6839	0.3839	0.5706	0.6498	0.411	0.7	0.34	0.58	0.62	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.096937	NA	NA	NA	NA	NA	0.507	NA	3.3161
1320	3	45773732	45773732	G	A	intronic	SACM1L	NA	NA	NA	intronic	ENSG00000211456	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs11709306	0.57	0.57	0.558	0.545527	0.6839	0.3839	0.5706	0.6498	0.411	0.7	0.34	0.58	0.62	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.078654	NA	NA	NA	NA	NA	0.471	NA	3.3161
1320	8	62479934	62479934	C	T	intronic	ASPH	NA	NA	NA	intronic	ENSG00000198363	NA	NA	NA	NA	NA	8q12.3	NA	NA	NA	NA	rs10090754	0.54	0.54	0.52	0.527356	0.6839	0.506	0.6239	0.2489	0.6963	0.7	0.5	0.67	0.26	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.201821	NA	NA	NA	NA	NA	0.543	NA	3.3161
1320	11	69071377	69071377	T	C	intergenic	MYEOV,CCND1	dist=6623;dist=384496	NA	NA	upstream	ENSG00000213275	NA	NA	NA	NA	NA	11q13.3	NA	NA	NA	NA	rs11605044	0.51	0.51	0.538	0.567891	0.1839	0.7262	0.4438	0.9085	0.4274	0.18	0.74	0.38	0.86	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.820068	NA	NA	NA	NA	NA	0.609	NA	3.3161
1320	1	26527310	26527310	C	G	intronic	CATSPER4	NA	NA	NA	intronic	ENSG00000188782	NA	NA	NA	NA	NA	1p36.11	NA	NA	NA	NA	rs12118976	0.19	0.19	0.183	0.194489	0.2455	0.0218	0.1513	0.3434	0.1493	0.26	0.02	0.17	0.32	0.2035	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.665517	NA	NA	0.235116	0.310486	NA	0.196	NA	3.315884
1320	10	105973981	105973981	C	G	intronic	WDR96	NA	NA	NA	intronic	ENSG00000197748	NA	NA	NA	NA	NA	10q25.1	NA	NA	NA	NA	rs584082	0.19	0.19	0.205	0.203075	0.2475	0.123	0.1412	0.2247	0.2546	0.26	0.11	0.17	0.21	0.2092	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.101216	NA	NA	0.227442	0.220154	NA	0.123	NA	3.315858
1320	14	101200445	101200445	T	C	intronic	DLK1	NA	NA	NA	intronic	ENSG00000185559	NA	NA	NA	Score=272;Name=lod=17	NA	14q32.2	NA	NA	NA	NA	rs17577779	0.75	0.75	0.703	0.746006	0.5437	0.994	0.683	0.7852	0.6902	0.56	1	0.65	0.83	0.6323	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.109764	NA	NA	0.508208	0.759503	NA	0.609	NA	3.315792
1320	15	100594271	100594271	G	A	intronic	ADAMTS17	NA	NA	NA	intronic	ENSG00000140470	NA	NA	NA	NA	NA	15q26.3	NA	NA	NA	NA	rs28529328	0.32	0.32	0.315	0.307308	0.2018	0.4435	0.3112	0.3298	0.2423	0.21	0.47	0.31	0.36	0.2676	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.257522	1.257522	NA	0.214884	0.30118	NA	0.268	NA	3.315716
1320	3	53265581	53265581	C	T	intronic	TKT	NA	NA	NA	intronic	ENSG00000163931	NA	NA	NA	NA	NA	3p21.1	NA	NA	NA	NA	rs17234092	0.14	0.14	0.134	0.126198	0.2515	0.0476	0.2176	0.0484	0.1186	0.26	0.04	0.2	0.05	0.1962	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.186898	NA	NA	0.23686	0.076033	NA	0.109	NA	3.31544
1320	12	117465981	117465981	T	C	UTR3	FBXW8	NM_012174:c.*4T>C,NM_153348:c.*4T>C	NA	NA	UTR3	ENSG00000174989	ENST00000309909:c.*4T>C,ENST00000455858:c.*4T>C	NA	NA	NA	NA	12q24.22	NA	NA	NA	NA	rs2291916	0.46	0.46	0.494	0.524161	0.325	0.4573	0.2478	0.8797	0.5133	0.31	0.43	0.27	0.86	0.3753	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.148086	NA	NA	0.317791	0.810713	NA	0.428	NA	3.3152424
1320	1	47110712	47110712	C	T	intronic	ATPAF1	NA	NA	NA	intronic	ENSG00000123472	NA	NA	NA	NA	NA	1p33	NA	NA	NA	NA	rs1258053	0.46	0.46	0.459	0.460863	0.6849	0.2004	0.5346	0.3533	0.592	0.7	0.22	0.53	0.32	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.280572	NA	NA	NA	NA	NA	0.558	NA	3.3151
1320	5	10489229	10489229	T	C	intergenic	ROPN1L,ANKRD33B	dist=24091;dist=75206	NA	NA	ncRNA_exonic	ENSG00000244361	NA	NA	NA	NA	NA	5p15.2	NA	NA	NA	NA	rs2399907	0.66	0.66	0.629	0.678914	0.6849	0.8651	0.7579	0.3797	0.8292	0.65	0.85	0.75	0.4	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.241966	NA	NA	NA	NA	NA	0.638	NA	3.3151
1320	14	75200697	75200697	G	A	intronic	FCF1	NA	NA	NA	intronic	ENSG00000119616	NA	NA	NA	NA	NA	14q24.3	NA	NA	NA	NA	rs3825708	0.7	0.7	0.716	0.710264	0.6849	0.751	0.7349	0.6861	0.7096	0.68	0.74	0.69	0.68	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.224941	NA	NA	NA	NA	NA	0.819	NA	3.3151
1320	17	67133352	67133352	T	G	intronic	ABCA6	NA	NA	NA	intronic	ENSG00000154262	NA	NA	NA	NA	NA	17q24.3	NA	NA	NA	NA	rs2041171	0.66	0.66	0.637	0.699081	0.6849	0.4692	0.7637	0.8737	0.6687	0.68	0.42	0.72	0.85	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.378556	NA	NA	NA	NA	NA	0.674	NA	3.3151
1320	17	72929380	72929380	G	C	intronic	OTOP2	NA	NA	NA	intronic	ENSG00000183034	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs2035835	0.73	0.73	0.731	0.769768	0.6849	0.6329	0.7536	0.9387	0.7812	0.71	0.6	0.72	0.94	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.794422	NA	NA	NA	NA	NA	0.696	NA	3.3151
1321	19	44426265	44426265	A	G	intronic	ZNF45	NA	NA	NA	ncRNA_intronic	ENSG00000267191	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs413093	0.57	0.57	0.541	0.528155	0.5169	0.7996	0.6499	0.3336	0.4366	0.51	0.82	0.58	0.38	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.091499	NA	NA	0.501886	0.353324	NA	0.5	NA	3.3145473
1321	2	33623288	33623288	T	C	intronic	LTBP1	NA	NA	NA	intronic	ENSG00000049323	NA	NA	NA	NA	NA	2p22.3	NA	NA	NA	NA	rs626121	0.61	0.61	0.594	0.569888	0.6859	0.6438	0.5706	0.4932	0.4775	0.68	0.63	0.56	0.51	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.225397	NA	NA	NA	NA	NA	0.601	NA	3.3141
1321	3	129152144	129152144	T	C	intronic	MBD4	NA	NA	NA	intronic	ENSG00000129071	NA	NA	NA	NA	NA	3q21.3	NA	NA	NA	NA	rs140695	0.84	0.84	0.855	0.851238	0.6859	0.9752	0.8055	0.9773	0.7556	0.68	0.98	0.77	0.97	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.824077	NA	NA	NA	NA	NA	0.891	NA	3.3141
1321	14	88983673	88983673	C	A	intronic	PTPN21	NA	NA	NA	intronic	ENSG00000070778	NA	NA	NA	NA	NA	14q31.3	NA	NA	NA	NA	rs4904452	0.54	0.54	0.491	0.455272	0.6859	0.5298	0.683	0.1452	0.3988	0.68	0.58	0.68	0.17	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.286322	NA	NA	NA	NA	NA	0.399	NA	3.3141
1321	22	18843741	18843741	T	A	intergenic	GGT3P,DGCR6	dist=64267;dist=49995	NA	NA	ncRNA_intronic	ENSG00000161103,ENSG00000215544	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs3983990	0.36	0.36	0.421	0.730431	0.6859	0.7321	0.6254	0.7837	0.7771	0.37	0.28	0.39	0.42	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.329208	NA	NA	NA	NA	NA	NA	NA	3.3141
1321	16	1652614	1652614	T	A	intronic	IFT140	NA	NA	NA	ncRNA_intronic	ENSG00000260989	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs2236269	0.47	0.47	0.456	0.503994	0.3032	0.5635	0.4006	0.7126	0.4407	0.3	0.54	0.39	0.72	0.3981	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.086556	NA	NA	0.318023	0.654616	NA	0.428	NA	3.3140103
1321	11	114569054	114569054	A	G	exonic	NXPE2	NA	synonymous SNV	NXPE2:NM_182495:exon3:c.A420G:p.G140G	exonic	ENSG00000204361	NA	synonymous SNV	ENSG00000204361:ENST00000375475:exon3:c.A420G:p.G140G,ENSG00000204361:ENST00000389586:exon3:c.A420G:p.G140G	NA	NA	11q23.3	NA	NA	NA	NA	rs1712838	0.78	0.78	0.74	0.76258	0.7773	0.8224	0.8329	0.674	0.7556	0.78	0.82	0.82	0.7	0.7932	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.718204	NA	NA	0.782527	0.715318	NA	0.804	NA	3.3136396
1321	13	52701637	52701637	T	G	UTR5	NEK5	NM_199289:c.-19A>C	NA	NA	UTR5	ENSG00000197168	ENST00000355568:c.-19A>C	NA	NA	NA	NA	13q14.3	NA	Name=MafK_(ab50322),GATA-1	NA	NA	rs1886544	0.57	0.57	0.509	0.523163	0.7107	0.5982	0.6398	0.267	0.5164	0.69	0.58	0.65	0.29	0.6217	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.540299	NA	NA	0.687442	0.32365	NA	0.58	NA	3.3134914
1321	5	137527917	137527917	C	G	intronic	CDC23	NA	NA	NA	intronic	ENSG00000094880	NA	NA	NA	NA	NA	5q31.2	NA	NA	NA	NA	rs2231478	0.21	0.21	0.196	0.20028	0.2515	0.0238	0.2291	0.3343	0.1278	0.24	0.03	0.29	0.33	0.2018	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.241908	NA	NA	0.233372	0.302542	NA	0.268	NA	3.313328
1321	1	17431277	17431277	G	T	intronic	PADI2	NA	NA	NA	intronic	ENSG00000117115	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs6701159	0.71	0.71	0.686	0.711462	0.6869	0.8284	0.7032	0.5983	0.7751	0.69	0.86	0.7	0.58	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.183706	NA	NA	NA	NA	NA	0.768	NA	3.3131
1321	8	26868333	26868333	C	A	intergenic	ADRA1A,STMN4	dist=145411;dist=225481	NA	NA	downstream	ENSG00000215288	NA	NA	NA	NA	NA	8p21.2	NA	NA	NA	NA	rs28441062	0.14	0.14	NA	0.121605	0.1869	0.0675	0.1585	0.0575	0.1708	0.21	0.05	0.19	0.13	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.743281	NA	NA	NA	NA	NA	0.203	NA	3.3131
1321	19	47588202	47588202	G	T	intronic	ZC3H4	NA	NA	NA	intronic	ENSG00000130749	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs7248181	0.42	0.42	0.4	0.375399	0.6869	0.2758	0.5403	0.1006	0.4121	0.69	0.26	0.53	0.1	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.062427	NA	NA	NA	NA	NA	0.37	NA	3.3131
1321	6	42613379	42613379	A	G	intronic	UBR2	NA	NA	NA	intronic	ENSG00000024048	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs3749900	0.19	0.19	0.2	0.209065	0.2465	0.0913	0.1931	0.2352	0.2679	0.24	0.09	0.15	0.26	0.2155	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.050076	NA	NA	0.225116	0.234226	NA	0.217	NA	3.312884
1321	6	152539350	152539350	C	G	intronic	SYNE1	NA	NA	NA	intronic	ENSG00000131018	NA	NA	NA	NA	NA	6q25.2	NA	NA	NA	NA	rs9371243	0.28	0.28	0.246	0.279153	0.2058	0.5347	0.2233	0.0938	0.3814	0.22	0.55	0.23	0.1	0.2599	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.397232	NA	NA	0.22186	0.118021	NA	0.275	NA	3.31244
1321	10	100003785	100003785	T	C	intronic	R3HCC1L	NA	NA	NA	intronic	ENSG00000166024	NA	NA	NA	NA	NA	10q24.2	NA	NA	NA	NA	rs1359508	0.33	0.33	0.332	0.322684	0.3231	0.4722	0.33	0.2088	0.317	0.32	0.48	0.33	0.17	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.938833	NA	NA	0.364551	0.253613	NA	0.326	NA	3.312349
1321	6	32975381	32975381	A	G	intronic	HLA-DOA	NA	NA	NA	intronic	ENSG00000204252	NA	NA	NA	NA	NA	6p21.32	NA	Name=ZNF263	NA	NA	rs453779	0.59	0.59	0.548	0.590455	0.5765	0.7044	0.4654	0.6135	0.545	0.57	0.67	0.46	0.63	0.5551	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.918363	NA	NA	0.556151	0.607616	NA	0.471	NA	3.312249
1321	6	18406500	18406500	A	G	intronic	RNF144B	NA	NA	NA	intronic	ENSG00000137393	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs6906391	0.63	0.63	0.631	0.604034	0.6879	0.6726	0.5504	0.5371	0.5757	0.69	0.66	0.57	0.54	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.265572	NA	NA	NA	NA	NA	0.652	NA	3.3121
1321	6	20042648	20042648	C	G	intergenic	ID4,MBOAT1	dist=200217;dist=57268	NA	NA	downstream	ENSG00000229700	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs2294182	0.18	0.18	0.162	0.170927	0.1879	0.1101	0.196	0.1846	0.18	0.19	0.12	0.2	0.22	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.072501	NA	NA	NA	NA	NA	0.217	NA	3.3121
1321	1	22204630	22204630	G	A	intronic	HSPG2	NA	NA	NA	intronic	ENSG00000142798	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs7513608	0.33	0.33	0.28	0.309704	0.2107	0.6052	0.4135	0.1664	0.227	0.22	0.6	0.38	0.15	0.2667	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.527619	NA	NA	0.21063	0.15713	NA	0.319	NA	3.31197
1321	12	68646521	68646521	T	C	intronic	IL22	NA	NA	NA	intronic	ENSG00000127318	NA	NA	NA	NA	NA	12q15	NA	Name=NRSF	NA	NA	rs2227491	0.54	0.54	0.497	0.549321	0.5596	0.5308	0.5072	0.6354	0.4714	0.56	0.48	0.52	0.6	0.5502	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.073282	NA	NA	0.578256	0.618475	NA	0.659	NA	3.311944
1321	1	26527304	26527304	T	C	intronic	CATSPER4	NA	NA	NA	intronic	ENSG00000188782	NA	NA	NA	NA	NA	1p36.11	NA	NA	NA	NA	rs12121284	0.21	0.21	0.215	0.205671	0.2455	0.0218	0.1527	0.385	0.1493	0.26	0.02	0.18	0.36	0.2066	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.818181	NA	NA	0.236047	0.344303	NA	0.21	NA	3.311853
1321	8	140690265	140690265	C	T	intronic	KCNK9	NA	NA	NA	intronic	ENSG00000169427	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs984793	0.57	0.57	0.553	0.595048	0.6889	0.375	0.6542	0.6074	0.6667	0.68	0.38	0.66	0.54	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.854793	NA	NA	NA	NA	NA	0.572	NA	3.3111
1321	19	6147743	6147743	G	C	intronic	ACSBG2	NA	NA	NA	intronic	ENSG00000087903,ENSG00000130377	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs9304929	0.76	0.76	0.747	0.732228	0.6889	0.7163	0.7435	0.8442	0.6339	0.7	0.74	0.75	0.88	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.196683	NA	NA	NA	NA	NA	0.761	NA	3.3111
1321	19	51132979	51132979	G	A	intronic	SYT3	NA	NA	NA	intronic	ENSG00000213023	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs10406994	0.58	0.58	0.582	0.596446	0.6889	0.1687	0.7176	0.8646	0.4939	0.67	0.17	0.7	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.630221	NA	NA	NA	NA	NA	0.174	NA	3.3111
1321	9	116060487	116060487	T	C	UTR5	RNF183	NM_145051:c.-23A>G	NA	NA	UTR5	ENSG00000165188	ENST00000441031:c.-23A>G,ENST00000416588:c.-23A>G,ENST00000297894:c.-23A>G,ENST00000478815:c.-23A>G	NA	NA	NA	NA	9q32	NA	NA	NA	NA	rs3750532	0.38	0.38	0.386	0.409545	0.3191	0.4246	0.2075	0.4493	0.5767	0.33	0.44	0.23	0.48	0.3646	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.125473	NA	NA	0.33879	0.434625	NA	0.413	NA	3.3108434
1321	5	40979790	40979790	A	T	intronic	C7	NA	NA	NA	intronic	ENSG00000112936	NA	NA	NA	NA	NA	5p13.1	NA	NA	NA	NA	rs2876849	0.2	0.2	0.204	0.211462	0.2406	0.3006	0.1268	0.059	0.3558	0.23	0.31	0.14	0.08	0.2297	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.027057	NA	NA	0.219094	0.067921	NA	0.159	NA	3.310606
1321	19	3660944	3660944	G	A	intronic	PIP5K1C	NA	NA	NA	intronic	ENSG00000186111	NA	NA	NA	NA	NA	19p13.3	NA	NA	Name=12	NA	rs3826944	0.6	0.6	0.602	0.558506	0.5606	0.6974	0.6542	0.5	0.4243	0.55	0.71	0.64	0.5	0.5644	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.874676	NA	NA	0.564651	0.49251	NA	0.565	NA	3.310349
1321	12	42305357	42305357	A	G	intergenic	PDZRN4,GXYLT1	dist=336965;dist=170291	NA	NA	ncRNA_intronic	ENSG00000257128,ENSG00000257239	NA	NA	NA	NA	NA	12q12	NA	NA	NA	NA	rs722216	0.56	0.56	0.519	0.547324	0.6899	0.4206	0.6931	0.323	0.7311	0.7	0.47	0.74	0.33	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.911779	NA	NA	NA	NA	NA	0.551	NA	3.3101
1321	10	126185707	126185707	C	T	intronic	LHPP	NA	NA	NA	intronic	ENSG00000107902	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs3824809	0.7	0.7	0.704	0.727436	0.6899	0.5883	0.6816	0.8185	0.819	0.7	0.61	0.69	0.81	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.770985	NA	NA	NA	NA	NA	0.659	NA	3.3101
1321	16	57155457	57155457	T	C	intronic	CPNE2	NA	NA	NA	intronic	ENSG00000140848	NA	NA	NA	NA	NA	16q13	NA	NA	NA	NA	rs4783976	0.63	0.63	0.612	0.619808	0.6899	0.504	0.7522	0.6203	0.5726	0.68	0.54	0.73	0.59	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.457131	NA	NA	NA	NA	NA	0.623	NA	3.3101
1321	17	7350544	7350544	G	A	intronic	CHRNB1	NA	NA	NA	intronic	ENSG00000170175	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs2302767	0.55	0.55	0.558	0.557708	0.6899	0.2113	0.5663	0.6611	0.6329	0.69	0.22	0.62	0.67	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.192247	NA	NA	NA	NA	ID=COSN165319;OCCURENCE=1(breast)	0.558	NA	3.3101
1321	2	242617851	242617851	A	G	intronic	DTYMK	NA	NA	NA	intronic	ENSG00000168393	NA	NA	NA	NA	NA	2q37.3	NA	NA	NA	NA	rs4076639	0.22	0.22	0.204	0.205671	0.2336	0.2946	0.2089	0.0817	0.2505	0.24	0.3	0.21	0.1	0.2317	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.783276	NA	NA	0.224977	0.10168	NA	0.217	NA	3.309723
1321	6	24554762	24554762	T	C	intronic	KIAA0319	NA	NA	NA	intronic	ENSG00000137261	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs2243831	0.26	0.26	0.264	0.279153	0.2416	0.1131	0.1686	0.5318	0.226	0.24	0.11	0.19	0.52	0.2302	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.81699	NA	NA	0.218605	0.479573	NA	0.304	NA	3.309595
1321	19	2115493	2115493	A	G	intronic	AP3D1	NA	NA	NA	intronic	ENSG00000065000	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs2066775	0.32	0.32	0.275	0.328874	0.1978	0.3373	0.2075	0.4909	0.3221	0.19	0.38	0.22	0.52	0.2711	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.524088	NA	NA	0.221573	0.439672	NA	0.29	NA	3.309527
1321	7	105171156	105171156	C	T	intergenic	PUS7,RINT1	dist=8471;dist=1376	NA	NA	downstream	ENSG00000223886	NA	NA	NA	NA	NA	7q22.3	NA	NA	NA	NA	rs73192120	0.11	0.11	0.087	0.121206	0.1909	0.0228	0.1513	0.0189	0.2679	0.21	0.01	0.15	0.02	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.927312	NA	NA	NA	NA	NA	0.094	NA	3.3091
1321	10	126185451	126185451	T	C	intronic	LHPP	NA	NA	NA	intronic	ENSG00000107902	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs10794134	0.7	0.7	0.698	0.731829	0.6909	0.5923	0.6859	0.8336	0.8129	0.7	0.61	0.7	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.089073	NA	NA	NA	NA	NA	0.652	NA	3.3091
1321	16	83251210	83251210	G	A	intronic	CDH13	NA	NA	NA	intronic	ENSG00000140945	NA	NA	NA	NA	NA	16q23.3	NA	NA	NA	NA	rs4572385	0.73	0.73	0.721	0.714257	0.6909	0.9563	0.7248	0.5204	0.7434	0.68	0.96	0.7	0.54	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.802189	1.802189	NA	NA	NA	NA	0.601	NA	3.3091
1321	17	27667411	27667411	G	T	intergenic	NUFIP2,MIR4523	dist=46245;dist=50269	NA	NA	downstream	ENSG00000239256	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs8078951	0.1	0.1	0.071	0.113019	0.1909	0.0089	0.1354	0.0522	0.2065	0.17	0.01	0.13	0.07	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.633964	NA	NA	NA	NA	NA	0.152	NA	3.3091
1321	11	132177740	132177740	G	T	intronic	NTM	NA	NA	NA	intronic	ENSG00000182667	NA	NA	NA	NA	NA	11q25	NA	NA	NA	NA	rs2305270	0.14	0.14	0.121	0.119609	0.2594	0.0486	0.1441	0.0227	0.1626	0.25	0.05	0.2	0.03	0.1979	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.499368	NA	NA	0.233768	0.055429	NA	0.145	NA	3.308932
1321	10	115963813	115963813	C	T	intronic	TDRD1	NA	NA	NA	intronic	ENSG00000095627	NA	NA	NA	NA	NA	10q25.3	NA	NA	NA	NA	rs10885537	0.19	0.19	0.179	0.173922	0.2545	0.0605	0.2233	0.2186	0.1125	0.24	0.06	0.24	0.21	0.1989	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.372348	NA	NA	0.237846	0.211757	NA	0.13	NA	3.308754
1321	19	2939268	2939268	A	G	intronic	ZNF77	NA	NA	NA	intronic	ENSG00000175691	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs10410034	0.41	0.41	0.314	0.426118	0.3499	0.4355	0.5	0.4637	0.3916	0.35	0.46	0.47	0.42	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.016243	NA	NA	0.341395	0.457558	NA	0.043	NA	3.308705
1321	6	32782387	32782387	G	A	intronic	HLA-DOB	NA	NA	NA	intronic	ENSG00000241106,ENSG00000250264	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs2071475	0.23	0.23	0.211	0.228435	0.2237	0.2421	0.3012	0.1346	0.2945	0.22	0.26	0.29	0.16	0.2458	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.749339	1.749339	NA	0.221853	0.141153	NA	0.21	NA	3.308647
1321	20	61460053	61460053	A	G	intronic	COL9A3	NA	NA	NA	intronic	ENSG00000092758	NA	NA	NA	NA	NA	20q13.33	NA	NA	NA	NA	rs2249897	0.34	0.34	0.327	0.33746	0.331	0.1171	0.2939	0.587	0.2648	0.34	0.14	0.33	0.56	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.56122	NA	NA	0.360377	0.526734	NA	0.377	NA	3.308623
1321	8	2054195	2054195	C	G	intronic	MYOM2	NA	NA	NA	intronic	ENSG00000036448	NA	NA	NA	NA	NA	8p23.3	NA	NA	Name=2	NA	rs3817706	0.5	0.5	0.48	0.457069	0.6024	0.5129	0.5245	0.2844	0.4356	0.6	0.51	0.57	0.29	0.5187	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.603945	NA	NA	0.570349	0.325919	NA	0.486	NA	3.308551
1321	10	118364818	118364818	G	T	intronic	PNLIPRP1	NA	NA	NA	intronic	ENSG00000187021	NA	NA	NA	NA	NA	10q25.3	NA	NA	NA	NA	rs2915754	0.72	0.72	0.686	0.70607	0.6918	0.8988	0.7637	0.5356	0.7117	0.68	0.89	0.73	0.55	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.933617	NA	NA	NA	NA	NA	0.739	NA	3.3082
1321	15	25937004	25937004	C	T	intronic	ATP10A	NA	NA	NA	intronic	ENSG00000206190	NA	NA	NA	NA	NA	15q12	NA	NA	NA	NA	rs2066705	0.49	0.49	0.461	0.446885	0.6918	0.495	0.5014	0.1679	0.4836	0.7	0.47	0.52	0.17	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.036783	NA	NA	NA	NA	NA	0.428	NA	3.3082
1321	12	62965149	62965149	T	C	intronic	MON2	NA	NA	NA	intronic	ENSG00000061987	NA	NA	NA	NA	NA	12q14.1	NA	NA	NA	NA	rs2270732	0.15	0.15	0.154	0.129193	0.2485	0.0278	0.1499	0.0976	0.1391	0.25	0.02	0.17	0.12	0.1948	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.141861	NA	NA	0.248605	0.101906	NA	0.174	NA	3.308095
1321	14	24587545	24587545	A	G	intronic	DCAF11	NA	NA	NA	intronic	ENSG00000100897	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs2277481	0.54	0.54	0.529	0.585264	0.3658	0.6369	0.6009	0.736	0.5429	0.36	0.61	0.57	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.189225	NA	NA	0.326218	0.668379	NA	0.42	NA	3.307982
1321	7	38253923	38253923	C	A	intronic	STARD3NL	NA	NA	NA	intronic	ENSG00000010270	NA	NA	NA	NA	NA	7p14.1	NA	NA	NA	NA	rs3778894	0.22	0.22	0.194	0.211462	0.2227	0.2202	0.2478	0.2126	0.1636	0.22	0.2	0.24	0.21	0.2226	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.134235	NA	NA	0.24686	0.21902	NA	0.232	NA	3.30784
1321	8	17920623	17920623	C	T	intronic	ASAH1	NA	NA	NA	intronic	ENSG00000104763	NA	NA	NA	NA	NA	8p22	NA	NA	NA	NA	rs6586683	0.37	0.37	0.327	0.383387	0.3419	0.375	0.4942	0.2723	0.5061	0.33	0.36	0.52	0.32	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.911155	NA	NA	0.350409	0.270231	NA	0.333	NA	3.307691
1321	1	19199487	19199487	A	G	intronic	ALDH4A1	NA	NA	NA	intronic	ENSG00000159423,ENSG00000255275	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs35255325	0.14	0.14	0.128	0.114816	0.2475	0.003	0.1859	0.0787	0.092	0.25	0.0017	0.21	0.09	0.1977	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.499021	NA	NA	0.247326	0.103041	NA	0.159	NA	3.307474
1321	7	83631376	83631376	T	C	intronic	SEMA3A	NA	NA	NA	intronic	ENSG00000075213	NA	NA	NA	NA	NA	7q21.11	NA	NA	NA	NA	rs3735513	0.21	0.21	0.216	0.22504	0.2247	0.1548	0.1844	0.2474	0.2965	0.23	0.15	0.21	0.24	0.2455	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.523589	NA	NA	0.222442	0.242624	NA	0.239	NA	3.307358
1321	4	9585639	9585639	C	A	intergenic	MIR548I2,DRD5	dist=27702;dist=197619	NA	NA	ncRNA_exonic	ENSG00000249799	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs11722510	0.48	0.48	0.415	0.419529	0.6928	0.4435	0.5086	0.0915	0.4939	0.68	0.44	0.59	0.13	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.958637	NA	NA	NA	NA	NA	0.21	NA	3.3072
1321	6	118320108	118320108	A	G	intronic	SLC35F1	NA	NA	NA	intronic	ENSG00000196376	NA	NA	NA	NA	NA	6q22.2	NA	NA	NA	NA	rs9387532	0.71	0.71	0.696	0.684505	0.6928	0.8155	0.6225	0.6445	0.6391	0.7	0.84	0.62	0.64	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.871928	NA	NA	NA	NA	NA	0.681	NA	3.3072
1321	14	94063949	94063949	C	T	intronic	UNC79	NA	NA	NA	intronic	ENSG00000133958	NA	NA	NA	NA	NA	14q32.12	NA	NA	NA	NA	rs11160132	0.56	0.56	0.525	0.533546	0.6928	0.3452	0.7205	0.4304	0.5706	0.7	0.35	0.73	0.43	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.431199	NA	NA	NA	NA	NA	0.594	NA	3.3072
1321	15	40505429	40505429	T	C	intronic	BUB1B	NA	NA	NA	intronic	ENSG00000156970	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs34358001	0.48	0.48	0.494	0.458466	0.6928	0.2847	0.549	0.298	0.5491	0.7	0.29	0.56	0.31	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.932775	NA	NA	NA	NA	NA	0.536	NA	3.3072
1321	1	22211217	22211217	G	A	intronic	HSPG2	NA	NA	NA	intronic	ENSG00000142798	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs2290493	0.33	0.33	0.236	0.310703	0.2097	0.6062	0.4135	0.1672	0.2311	0.22	0.6	0.38	0.15	0.2763	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.453551	NA	NA	0.207081	0.153549	NA	0.319	NA	3.306919
1321	12	122689244	122689244	C	T	intronic	B3GNT4	NA	NA	NA	UTR5	ENSG00000176383	ENST00000535274:c.-1630C>T	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs12828049	0.3	0.3	0.219	0.260383	0.2734	0.5585	0.1715	0.034	0.3088	0.31	0.59	0.19	0.04	0.2925	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.232223	NA	NA	0.294371	0.075682	NA	0.217	NA	3.3063957
1321	2	218694512	218694512	T	G	intronic	TNS1	NA	NA	NA	intronic	ENSG00000079308	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs55694913	NA	NA	NA	0.759385	0.6938	0.7083	0.7795	0.823	0.7791	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.31822	NA	NA	NA	NA	NA	NA	NA	3.3062
1321	3	119526349	119526349	G	A	intronic	NR1I2	NA	NA	NA	intronic	ENSG00000144852	NA	NA	NA	NA	NA	3q13.33	NA	NA	NA	NA	rs1464603	0.53	0.53	0.504	0.480032	0.6938	0.6052	0.6801	0.056	0.5624	0.69	0.62	0.67	0.08	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.148423	NA	NA	NA	NA	NA	0.5	NA	3.3062
1321	9	123927477	123927477	T	A	intronic	CNTRL	NA	NA	NA	intronic	ENSG00000119397	NA	NA	NA	NA	NA	9q33.2	NA	NA	NA	NA	rs4836841	0.64	0.64	0.589	0.64397	0.6938	0.7778	0.7406	0.2564	0.91	0.69	0.8	0.75	0.26	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.832342	NA	NA	NA	NA	NA	0.551	NA	3.3062
1321	12	8382209	8382209	C	T	intergenic	FAM90A1,FAM86FP	dist=1995;dist=1436	NA	NA	ncRNA_intronic	ENSG00000254016	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs9669714	0.55	0.55	0.558	0.515375	0.6938	0.4901	0.5288	0.3737	0.5399	0.67	0.5	0.56	0.39	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.38512	NA	NA	NA	NA	ID=COSN164132;OCCURENCE=1(breast)	NA	NA	3.3062
1321	12	50290728	50290728	A	G	intronic	FAIM2	NA	NA	NA	intronic	ENSG00000135472	NA	NA	NA	NA	NA	12q13.12	NA	NA	NA	NA	rs297935	0.73	0.73	0.686	0.715855	0.6938	0.8611	0.7824	0.5348	0.7863	0.69	0.89	0.79	0.54	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.488783	NA	NA	NA	NA	NA	0.659	NA	3.3062
1321	17	73282299	73282299	C	T	intronic	SLC25A19	NA	NA	NA	intronic	ENSG00000125454	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs2306218	0.61	0.61	0.571	0.546725	0.6938	0.8393	0.6657	0.0832	0.636	0.71	0.91	0.63	0.1	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.12875	NA	NA	NA	NA	NA	0.5	NA	3.3062
1321	1	19184176	19184176	G	A	intronic	TAS1R2	NA	NA	NA	intronic	ENSG00000179002,ENSG00000255275	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs72953138	0.2	0.2	0.213	0.188698	0.2455	0.0694	0.1873	0.3041	0.0982	0.25	0.06	0.22	0.29	0.2086	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.372561	NA	NA	0.239884	0.277576	NA	0.304	NA	3.306016
1321	19	56510965	56510965	C	T	upstream	NLRP5	NA	NA	NA	upstream	ENSG00000171487	NA	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs62123572	0.32	0.32	0.297	0.289936	0.3608	0.4544	0.2781	0.0666	0.3579	0.37	0.48	0.31	0.07	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.980771	NA	NA	NA	NA	NA	0.29	NA	3.3058666
1321	19	39416966	39416966	G	T	intronic	SARS2	NA	NA	NA	intronic	ENSG00000104835,ENSG00000269547	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs4803045	0.18	0.18	0.139	0.217452	0.2684	0.2192	0.2406	0.056	0.365	0.22	0.23	0.21	0.03	0.2569	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.928427	NA	NA	0.168953	0.047889	ID=COSN165811;OCCURENCE=1(breast)	NA	NA	3.305747
1321	6	161178421	161178421	T	C	intergenic	PLG,MAP3K4	dist=3336;dist=234401	NA	NA	intergenic	ENSG00000122194,ENSG00000223627	dist=4083;dist=58161	NA	NA	NA	NA	6q26	NA	NA	NA	NA	rs139422027	0.01	0.01	0.009	0.0109824	0.0278	NA	0.0101	0.0008	0.0194	0.02	NA	0.01	NA	NA	0.02	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.333421	NA	NA	NA	NA	NA	0.007	NA	3.3055334
1321	10	97440394	97440394	T	C	intronic	TCTN3	NA	NA	NA	intronic	ENSG00000119977	NA	NA	NA	NA	NA	10q24.1	NA	NA	NA	NA	rs12784530	0.18	0.18	0.15	0.16274	0.2525	0.0774	0.1873	0.1551	0.1513	0.25	0.09	0.23	0.16	0.2057	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.777914	NA	NA	0.236279	0.169315	NA	0.203	NA	3.305521
1321	22	50302850	50302850	A	G	intronic	ALG12	NA	NA	NA	intronic	ENSG00000182858	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs4075331	0.34	0.34	0.374	0.401957	0.2097	0.1776	0.1888	0.8253	0.41	0.22	0.18	0.2	0.83	0.2704	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.808444	NA	NA	0.214419	0.71153	ID=COSN166788;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.471	NA	3.305481
1321	7	149522366	149522366	T	G	intronic	SSPO	NA	NA	NA	ncRNA_exonic	ENSG00000197558	NA	NA	NA	NA	NA	7q36.1	NA	NA	NA	NA	rs2074697	0.47	0.47	0.462	0.494609	0.3101	0.4296	0.3919	0.851	0.3425	0.3	0.43	0.4	0.83	0.3827	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.403961	NA	NA	0.335065	0.746818	NA	0.514	NA	3.3054683
1321	7	26778406	26778406	A	G	intronic	SKAP2	NA	NA	NA	intronic	ENSG00000005020	NA	NA	NA	NA	NA	7p15.2	Score=870;Name=V$HNF3B_01	NA	NA	NA	rs10951145	0.63	0.63	0.593	0.627796	0.5537	0.8542	0.6196	0.4962	0.6544	0.57	0.86	0.62	0.47	0.5984	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.639407	2.639407	NA	0.542558	0.496142	NA	0.5	NA	3.305342
1321	14	106494503	106494503	G	A	intergenic	ADAM6,LINC00226	dist=56145;dist=249766	NA	NA	intronic	ENSG00000211937	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs17705658	0.08	0.08	0.051	0.072484	0.1332	0.002	0.1326	0.034	0.092	0.13	NA	0.16	0.03	0.1059	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.374446	NA	NA	0.122283	0.055854	NA	0.094	NA	3.3052837
1321	1	63113511	63113511	C	A	intronic	DOCK7	NA	NA	NA	intronic	ENSG00000116641	NA	NA	NA	NA	NA	1p31.3	NA	NA	NA	NA	rs746735	0.63	0.63	0.595	0.574681	0.6948	0.7669	0.6124	0.3472	0.5337	0.69	0.78	0.66	0.33	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.121124	NA	NA	NA	NA	NA	0.609	NA	3.3052
1321	1	63113719	63113719	T	C	intronic	DOCK7	NA	NA	NA	intronic	ENSG00000116641	NA	NA	NA	NA	NA	1p31.3	NA	NA	NA	NA	rs1168089	0.63	0.63	0.612	0.571885	0.6948	0.7679	0.6124	0.3359	0.5337	0.69	0.78	0.66	0.33	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.590865	NA	NA	NA	NA	NA	0.58	NA	3.3052
1321	9	123370345	123370345	C	G	intronic	MEGF9	NA	NA	NA	intronic	ENSG00000106780	NA	NA	NA	NA	NA	9q33.2	NA	NA	NA	NA	rs991121	0.55	0.55	0.508	0.566494	0.6948	0.5843	0.7334	0.2421	0.7362	0.69	0.56	0.71	0.22	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.289308	1.289308	NA	NA	NA	NA	0.565	NA	3.3052
1321	19	39416967	39416967	A	T	intronic	SARS2	NA	NA	NA	intronic	ENSG00000104835,ENSG00000269547	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs4803046	0.18	0.18	0.146	0.217452	0.2684	0.2192	0.2406	0.056	0.365	0.22	0.23	0.21	0.03	0.257	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.230795	NA	NA	0.169535	0.051067	ID=COSN165812;OCCURENCE=1(breast)	NA	NA	3.305065
1322	19	371369	371369	G	T	intronic	THEG	NA	NA	NA	intronic	ENSG00000105549	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs644609	0.26	0.26	0.063	0.244808	0.3777	0.2381	0.2061	0.1596	0.2577	0.36	0.23	0.24	0.15	0.2456	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.131181	NA	NA	0.07186	0.029746	NA	0.13	NA	3.30484
1322	15	42127734	42127734	A	G	intronic	JMJD7,JMJD7-PLA2G4B	NA	NA	NA	intronic	ENSG00000168970,ENSG00000243789	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs2241522	0.26	0.26	0.236	0.261581	0.3559	0.1806	0.4164	0.1014	0.3548	0.37	0.17	0.4	0.11	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.372672	NA	NA	0.339475	0.151786	ID=COSN164918;OCCURENCE=1(breast)	0.188	NA	3.304625
1322	22	20128651	20128651	T	G	intronic	ZDHHC8	NA	NA	NA	intronic	ENSG00000099904	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs175175	0.78	0.78	0.763	0.782548	0.6958	0.8075	0.817	0.8752	0.6963	0.7	0.8	0.78	0.87	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.084379	NA	NA	NA	NA	NA	0.696	NA	3.3042
1322	3	108295067	108295067	G	A	intronic	KIAA1524	NA	NA	NA	intronic	ENSG00000163507	NA	NA	NA	NA	NA	3q13.13	NA	NA	NA	NA	rs16854713	0.23	0.23	0.217	0.254193	0.2157	0.4554	0.2695	0.0567	0.3425	0.22	0.39	0.25	0.04	0.2569	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.190874	NA	NA	0.223506	0.086199	ID=COSN166962;OCCURENCE=1(large_intestine)	0.152	NA	3.303894
1322	1	116260532	116260532	A	T	intronic	CASQ2	NA	NA	NA	intronic	ENSG00000118729	NA	NA	NA	NA	NA	1p13.1	NA	Name=CTCF	NA	NA	rs2997741	0.65	0.65	0.661	0.642772	0.5656	0.6706	0.6383	0.7057	0.6115	0.58	0.68	0.64	0.73	0.5802	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.503796	NA	NA	0.550465	0.694507	NA	0.732	NA	3.303735
1322	20	57867301	57867301	G	A	intergenic	ZNF831,EDN3	dist=33134;dist=8198	NA	NA	intergenic	ENSG00000124203,ENSG00000124205	dist=33133;dist=8181	NA	NA	NA	NA	20q13.32	NA	NA	NA	NA	rs142835180	0.02	0.02	0.015	0.0191693	0.0298	NA	0.013	0.0015	0.0562	0.03	NA	0.02	0.002	NA	0.03	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.611871	NA	NA	NA	NA	NA	NA	NA	3.3035334
1322	18	693828	693828	A	C	intronic	ENOSF1	NA	NA	NA	intronic	ENSG00000132199	NA	NA	NA	NA	NA	18p11.32	NA	NA	NA	NA	rs2305996	0.26	0.26	0.25	0.250599	0.3469	0.0923	0.3487	0.2769	0.2096	0.34	0.08	0.33	0.29	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.705412	NA	NA	0.34978	0.24711	NA	0.268	NA	3.30332
1322	12	99116919	99116919	A	G	intronic	APAF1	NA	NA	NA	intronic	ENSG00000120868	NA	NA	NA	NA	NA	12q23.1	NA	NA	NA	NA	rs11109582	0.36	0.36	0.323	0.347843	0.3678	0.4871	0.4409	0.1785	0.3466	0.36	0.49	0.42	0.16	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.736642	NA	NA	0.32898	0.204909	NA	0.341	NA	3.30322
1322	2	202608877	202608877	C	A	intronic	ALS2	NA	NA	NA	intronic	ENSG00000003393	NA	NA	NA	NA	NA	2q33.1	NA	NA	NA	NA	rs4673207	0.51	0.51	0.468	0.459864	0.6968	0.373	0.7464	0.2436	0.3947	0.68	0.39	0.73	0.25	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.175297	NA	NA	NA	NA	NA	0.522	NA	3.3032
1322	3	58270963	58270963	T	C	intronic	ABHD6	NA	NA	NA	intronic	ENSG00000163686	NA	NA	NA	NA	NA	3p14.3	NA	NA	NA	NA	rs6774235	0.84	0.84	0.841	0.859425	0.6968	1	0.8098	0.9153	0.8415	0.72	1	0.81	0.89	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.166406	NA	NA	NA	NA	NA	0.855	NA	3.3032
1322	6	29769521	29769521	A	G	intergenic	LOC554223,HLA-G	dist=3937;dist=25235	NA	NA	ncRNA_exonic	ENSG00000261548	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs1736982	0.69	0.69	0.699	0.688299	0.6968	0.5595	0.7176	0.8714	0.544	0.68	0.56	0.69	0.87	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.141047	NA	NA	NA	NA	NA	0.659	NA	3.3032
1322	8	6390079	6390079	G	A	intronic	ANGPT2,MCPH1	NA	NA	NA	intronic	ENSG00000091879,ENSG00000147316	NA	NA	NA	NA	NA	8p23.1	NA	NA	NA	NA	rs2515482	0.65	0.65	0.649	0.619209	0.6968	0.5526	0.7104	0.6596	0.4888	0.7	0.54	0.7	0.66	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.34856	NA	NA	NA	NA	NA	0.703	NA	3.3032
1322	4	167675635	167675635	G	A	UTR3	SPOCK3	NM_001204358:c.*13C>T	NA	NA	UTR3	ENSG00000196104	ENST00000512648:c.*13C>T	NA	NA	NA	NA	4q32.3	NA	NA	NA	NA	rs2305593	0.35	0.35	0.326	0.358427	0.3489	0.3492	0.5159	0.295	0.3517	0.34	0.35	0.45	0.3	0.3649	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.154599	NA	NA	0.31686	0.301407	NA	0.268	NA	3.3026734
1322	7	140069361	140069361	G	C	intronic	SLC37A3	NA	NA	NA	intronic	ENSG00000157800	NA	NA	NA	NA	NA	7q34	NA	Name=MafK_(ab50322)	NA	NA	rs4448174	0.54	0.54	0.533	0.54992	0.5676	0.5417	0.451	0.5174	0.6544	0.57	0.55	0.49	0.52	0.5668	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.525794	NA	NA	0.56314	0.54562	NA	0.659	NA	3.30246
1322	3	13669537	13669537	T	G	intronic	FBLN2	NA	NA	NA	intronic	ENSG00000163520	NA	NA	NA	NA	NA	3p25.1	NA	NA	NA	NA	rs1966825	0.82	0.82	0.789	0.826078	0.6978	0.9931	0.8487	0.8238	0.773	0.69	0.99	0.84	0.82	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.372957	NA	NA	NA	NA	NA	0.848	NA	3.3022
1322	12	6620495	6620495	G	T	intronic	NCAPD2	NA	NA	NA	intronic	ENSG00000010292	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs7358768	0.65	0.65	0.639	0.654752	0.6978	0.5456	0.7651	0.6528	0.6472	0.68	0.53	0.75	0.65	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.896095	NA	NA	NA	NA	NA	0.688	NA	3.3022
1322	16	28913787	28913787	T	C	intronic	ATP2A1	NA	NA	NA	intronic	ENSG00000196296	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs7189927	0.75	0.75	0.781	0.752596	0.6978	0.873	0.5245	0.7837	0.8047	0.69	0.87	0.62	0.81	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.716448	NA	NA	NA	NA	NA	0.833	NA	3.3022
1322	16	58296545	58296545	G	A	intronic	CCDC113	NA	NA	NA	intronic	ENSG00000103021	NA	NA	NA	NA	NA	16q21	NA	NA	NA	NA	rs3815802	0.73	0.73	0.723	0.729233	0.6978	0.6577	0.5965	0.9599	0.6176	0.7	0.63	0.63	0.97	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.336136	NA	NA	NA	NA	NA	0.783	NA	3.3022
1322	17	78061353	78061353	G	A	intronic	CCDC40	NA	NA	NA	intronic	ENSG00000141519	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs11150840	0.64	0.64	0.633	0.651158	0.6978	0.6111	0.5346	0.6248	0.7628	0.71	0.63	0.54	0.61	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.788597	NA	NA	NA	NA	NA	0.616	NA	3.3022
1322	22	26193824	26193824	C	T	intronic	MYO18B	NA	NA	NA	intronic	ENSG00000133454	NA	NA	NA	NA	NA	22q12.1	NA	NA	NA	NA	rs2877299	0.58	0.58	0.533	0.554113	0.6978	0.6617	0.6268	0.261	0.6401	0.69	0.66	0.61	0.27	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.021256	NA	NA	NA	NA	NA	0.529	NA	3.3022
1322	11	89413850	89413850	C	T	intronic	FOLH1B	NA	NA	NA	ncRNA_intronic	ENSG00000134612	NA	NA	NA	NA	NA	11q14.3	NA	NA	NA	NA	rs10830340	0.22	0.22	0.16	0.226038	0.3708	0.131	0.2493	0.1626	0.2444	0.3	0.13	0.27	0.16	0.295	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.365562	NA	NA	0.365546	0.205227	NA	0.254	NA	3.3019873
1322	1	19581226	19581226	G	A	intronic	MRTO4	NA	NA	NA	intronic	ENSG00000053372	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs735026	0.25	0.25	0.268	0.251797	0.2266	0.1032	0.183	0.4932	0.1534	0.24	0.1	0.2	0.47	0.2268	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.335187	NA	NA	0.244767	0.474353	ID=COSN162986;OCCURENCE=1(breast)	0.442	NA	3.301833
1322	8	13072177	13072177	C	T	intronic	DLC1	NA	NA	NA	exonic	ENSG00000164741	NA	synonymous SNV	ENSG00000164741:ENST00000316609:exon6:c.G1455A:p.Q485Q	NA	NA	8p22	NA	NA	NA	NA	rs3739300	0.64	0.64	0.67	0.659944	0.4732	0.8542	0.5504	0.7852	0.5603	0.47	0.87	0.49	0.74	0.5495	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.685413	NA	NA	0.508953	0.730595	NA	0.681	NA	3.3016803
1322	19	1796943	1796943	C	T	intronic	ATP8B3	NA	NA	NA	intronic	ENSG00000130270	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs62127692	0.18	0.18	0.2	0.193091	0.2535	0.1042	0.1153	0.1884	0.2843	0.25	0.1	0.14	0.21	0.2186	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.476522	NA	NA	0.226438	0.184749	NA	0.13	NA	3.301462
1322	11	2683357	2683357	A	G	ncRNA_exonic	KCNQ1OT1	NA	NA	NA	ncRNA_exonic	ENSG00000269821	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs760419	0.5	0.5	0.527	0.519768	0.4523	0.3313	0.366	0.8578	0.4356	0.46	0.36	0.4	0.82	0.4492	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.007249	NA	NA	0.463712	0.796094	NA	0.435	NA	3.3014546
1322	20	50287790	50287790	A	G	exonic	ATP9A	NA	synonymous SNV	ATP9A:NM_006045:exon12:c.T1044C:p.R348R	exonic	ENSG00000054793	NA	synonymous SNV	ENSG00000054793:ENST00000311637:exon7:c.T636C:p.R212R,ENSG00000054793:ENST00000402822:exon7:c.T681C:p.R227R,ENSG00000054793:ENST00000338821:exon12:c.T1044C:p.R348R	NA	NA	20q13.2	NA	NA	NA	NA	rs2255342	0.72	0.72	0.69	0.704073	0.7942	0.7976	0.7046	0.5091	0.7781	0.78	0.81	0.73	0.5	0.7666	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.303567	NA	NA	0.804419	0.592147	NA	0.746	NA	3.3014476
1322	8	72965973	72965973	G	A	ncRNA_exonic	LOC100132891	NA	NA	NA	intronic	ENSG00000104321,ENSG00000235531	NA	NA	NA	NA	NA	8q13.3	NA	NA	NA	NA	rs3735942	0.43	0.43	0.383	0.424121	0.3062	0.5585	0.572	0.3601	0.3885	0.32	0.57	0.52	0.36	0.4013	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.440809	NA	NA	0.324535	0.381979	NA	0.384	NA	3.3012983
1322	3	29977739	29977739	T	C	intronic	RBMS3	NA	NA	NA	intronic	ENSG00000144642	NA	NA	NA	NA	NA	3p24.1	NA	Name=JunD,IRF4_(M-17)	Name=13	NA	rs1449287	0.86	0.86	0.843	0.838858	0.9046	0.9544	0.8545	0.6672	0.8732	0.92	0.95	0.83	0.67	0.8864	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.585086	NA	NA	0.907752	0.712509	NA	0.848	NA	3.301248
1322	1	152193544	152193544	A	G	exonic	HRNR	NA	synonymous SNV	HRNR:NM_001009931:exon3:c.T561C:p.H187H	exonic	ENSG00000197915	NA	synonymous SNV	ENSG00000197915:ENST00000368801:exon3:c.T561C:p.H187H	NA	NA	1q21.3	NA	NA	NA	NA	rs7535536	0.59	0.59	0.584	0.531949	0.829	0.3274	0.5519	0.469	0.5082	0.82	0.36	0.63	0.47	0.7062	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.059929	NA	NA	0.830233	0.524058	ID=COSM146615;OCCURENCE=1(stomach)	0.688	NA	3.3012336
1322	1	11292666	11292666	T	A	intronic	MTOR	NA	NA	NA	intronic	ENSG00000198793	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs10864495	0.59	0.59	0.528	0.542332	0.6988	0.7917	0.6902	0.0923	0.6278	0.71	0.8	0.69	0.1	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.370113	NA	NA	NA	NA	NA	0.558	NA	3.3012
1322	1	11319587	11319587	A	G	intronic	MTOR	NA	NA	NA	intronic	ENSG00000198793	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs4845988	0.59	0.59	0.543	0.538339	0.6988	0.7718	0.6902	0.0923	0.6278	0.71	0.79	0.69	0.1	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.066206	NA	NA	NA	NA	NA	0.558	NA	3.3012
1322	1	45453893	45453893	A	C	intergenic	EIF2B3,HECTD3	dist=1499;dist=14327	NA	NA	downstream	ENSG00000232369,ENSG00000268949	NA	NA	NA	NA	NA	1p34.1	NA	NA	NA	NA	rs7553658	0.31	0.31	0.285	0.323283	0.1988	0.2758	0.4337	0.5015	0.181	0.2	0.25	0.36	0.48	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.346308	NA	NA	NA	NA	NA	0.355	NA	3.3012
1322	1	45457681	45457681	G	A	intergenic	EIF2B3,HECTD3	dist=5287;dist=10539	NA	NA	upstream	ENSG00000268949	NA	NA	NA	NA	NA	1p34.1	NA	NA	NA	NA	rs12126314	0.31	0.31	0.309	0.322883	0.1988	0.2748	0.4323	0.5015	0.181	0.2	0.25	0.36	0.48	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.557429	NA	NA	NA	NA	ID=COSN163069;OCCURENCE=1(breast)	0.341	NA	3.3012
1322	16	28906084	28906084	G	C	intronic	ATP2A1	NA	NA	NA	intronic	ENSG00000196296	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs9931989	0.75	0.75	0.771	0.750799	0.6988	0.874	0.5245	0.7738	0.8067	0.69	0.87	0.62	0.8	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.200541	NA	NA	NA	NA	NA	0.855	NA	3.3012
1322	21	35228953	35228953	A	G	intronic	ITSN1	NA	NA	NA	intronic	ENSG00000205726,ENSG00000249209	NA	NA	NA	NA	NA	21q22.11	NA	NA	NA	NA	rs9305535	0.67	0.67	0.659	0.671326	0.6988	0.9048	0.5821	0.4024	0.8292	0.7	0.92	0.61	0.4	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.65303	NA	NA	NA	NA	NA	0.616	NA	3.3012
1322	16	56504724	56504724	G	C	intronic	OGFOD1	NA	NA	NA	intronic	ENSG00000087263,ENSG00000125124	NA	NA	NA	NA	NA	16q12.2	NA	NA	NA	NA	rs13337155	0.13	0.13	0.133	0.145367	0.2137	0.0615	0.1369	0.0893	0.2434	0.22	0.05	0.15	0.08	0.2478	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.086491	NA	NA	0.237558	0.120109	NA	0.159	NA	3.300942
1322	2	118694393	118694393	C	G	intronic	CCDC93	NA	NA	NA	intronic	ENSG00000125633	NA	NA	NA	NA	NA	2q14.1	NA	NA	NA	NA	rs2303333	0.33	0.33	0.328	0.343051	0.3509	0.1399	0.2507	0.5658	0.3088	0.36	0.12	0.29	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.194885	NA	NA	0.348523	0.493497	NA	0.42	NA	3.300577
1322	3	108394771	108394771	G	A	intronic	DZIP3	NA	NA	NA	intronic	ENSG00000198919	NA	NA	NA	NA	NA	3q13.13	NA	NA	NA	NA	rs12486790	0.23	0.23	0.223	0.253794	0.2157	0.4554	0.268	0.0567	0.3415	0.22	0.39	0.25	0.04	0.2575	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.307488	NA	NA	0.226384	0.089237	ID=COSN166965;OCCURENCE=1(large_intestine)	0.217	NA	3.300416
1322	5	70834926	70834926	T	C	intronic	BDP1	NA	NA	NA	intronic	ENSG00000145734	NA	NA	NA	NA	NA	5q13.2	NA	NA	NA	NA	rs276589	0.35	0.35	0.315	NA	NA	NA	NA	NA	NA	0.33	0.52	0.44	0.1	0.3551	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.704202	3.704202	NA	0.344591	0.150353	NA	0.29	NA	3.300309
1322	1	6314479	6314479	C	T	intronic	GPR153	NA	NA	NA	intronic	ENSG00000158292	NA	NA	NA	NA	NA	1p36.31	NA	NA	NA	NA	rs12740426	0.58	0.58	0.544	0.565296	0.6998	0.5853	0.745	0.2731	0.6738	0.71	0.57	0.72	0.3	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.659602	NA	NA	NA	NA	NA	0.478	NA	3.3002
1322	4	159390809	159390809	T	A	intergenic	TMEM144,RXFP1	dist=214370;dist=52057	NA	NA	ncRNA_exonic	ENSG00000248387	NA	NA	NA	NA	NA	4q32.1	NA	NA	NA	NA	rs12648694	0.66	0.66	0.62	0.59385	0.6998	0.9454	0.6744	0.2042	0.592	0.71	0.96	0.68	0.23	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.699206	NA	NA	NA	NA	NA	0.493	NA	3.3002
1322	4	159391086	159391086	C	T	intergenic	TMEM144,RXFP1	dist=214647;dist=51780	NA	NA	ncRNA_intronic	ENSG00000248387	NA	NA	NA	NA	NA	4q32.1	NA	NA	NA	NA	rs12646075	0.66	0.66	0.621	0.59385	0.6998	0.9454	0.6744	0.2042	0.592	0.71	0.96	0.68	0.23	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.041821	NA	NA	NA	NA	NA	0.493	NA	3.3002
1322	16	28915217	28915217	G	A	intronic	ATP2A1	NA	NA	NA	intronic	ENSG00000196296	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs8046545	0.79	0.79	0.822	0.816693	0.6998	0.8839	0.5403	0.9849	0.8364	0.69	0.87	0.63	0.98	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.542817	NA	NA	NA	NA	NA	0.181	NA	3.3002
1322	20	9543681	9543681	C	T	intronic	PAK7	NA	NA	NA	intronic	ENSG00000101349	NA	NA	NA	NA	NA	20p12.2	NA	NA	NA	NA	rs2297346	0.33	0.33	0.363	0.34984	0.2266	0.2143	0.2089	0.7073	0.2331	0.23	0.22	0.23	0.71	0.2496	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.279971	NA	NA	0.223605	0.639809	NA	0.377	NA	3.300195
1322	1	19583684	19583684	C	T	intronic	MRTO4	NA	NA	NA	intronic	ENSG00000053372	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs1774074	0.25	0.25	0.252	0.251398	0.2266	0.1012	0.183	0.4932	0.1534	0.24	0.1	0.2	0.47	0.2287	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.098167	NA	NA	0.244535	0.47458	ID=COSN162987;OCCURENCE=1(breast)	0.442	NA	3.300165
1322	7	2260499	2260499	C	T	intronic	MAD1L1	NA	NA	NA	intronic	ENSG00000002822	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs1637731	0.27	0.27	0.28	0.263778	0.2376	0.0962	0.2608	0.4539	0.2086	0.23	0.13	0.26	0.5	0.2402	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.238372	NA	NA	0.22225	0.384132	NA	0.283	NA	3.29995
1322	8	59739333	59739333	C	T	intronic	TOX	NA	NA	NA	intronic	ENSG00000198846	NA	NA	NA	NA	NA	8q12.1	NA	NA	NA	NA	rs4737522	0.15	0.15	0.141	0.154553	0.2525	0.0595	0.1556	0.0794	0.2526	0.26	0.06	0.18	0.08	0.2111	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.911827	NA	NA	0.236977	0.095325	NA	0.123	NA	3.299423
1322	17	21215424	21215424	G	A	intronic	MAP2K3	NA	NA	NA	intronic	ENSG00000034152	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs35026048	0.35	0.35	0.29	0.000199681	NA	0.001	NA	NA	NA	0.39	0.17	0.35	0.49	0.3606	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.858141	NA	NA	0.340116	0.453473	NA	0.196	NA	3.299284
1322	9	124282740	124282740	A	G	intergenic	GGTA1P,DAB2IP	dist=20434;dist=46659	NA	NA	upstream	ENSG00000213467	NA	NA	NA	NA	NA	9q33.2	NA	NA	NA	NA	rs3962628	0.27	0.27	0.223	0.259784	0.2008	0.3323	0.1585	0.3949	0.135	0.19	0.33	0.2	0.37	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.896341	NA	NA	NA	NA	NA	0.29	NA	3.2992
1322	14	34955132	34955132	A	C	intergenic	SPTSSA,EAPP	dist=23664;dist=30003	NA	NA	upstream	ENSG00000237450	NA	NA	NA	NA	NA	14q13.1	NA	NA	NA	NA	rs17523454	0.2	0.2	0.211	0.210863	0.2008	0.1637	0.2522	0.1808	0.2812	0.19	0.21	0.23	0.19	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.485348	NA	NA	NA	NA	NA	0.123	NA	3.2992
1322	17	3419689	3419689	C	T	intronic	TRPV3	NA	NA	NA	intronic	ENSG00000167723	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs8081785	0.54	0.54	0.577	0.588259	0.7008	0.6349	0.7161	0.3933	0.5971	0.62	0.59	0.62	0.3	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.865927	NA	NA	NA	NA	NA	NA	NA	3.2992
1322	2	127821085	127821085	C	T	intronic	BIN1	NA	NA	NA	intronic	ENSG00000136717	NA	NA	NA	NA	NA	2q14.3	NA	NA	NA	NA	rs2071268	0.33	0.33	0.284	0.345248	0.3658	0.3879	0.3991	0.1543	0.5	0.36	0.38	0.44	0.15	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.562517	NA	NA	0.335009	0.16474	NA	0.232	NA	3.299191
1322	3	150845574	150845574	C	T	intronic	MED12L	NA	NA	NA	intronic	ENSG00000144893	NA	NA	NA	NA	NA	3q25.1	NA	NA	NA	NA	rs1897296	0.38	0.38	0.4	0.389377	0.2296	0.4603	0.2752	0.612	0.2607	0.22	0.46	0.28	0.59	0.2695	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.907844	NA	NA	0.201722	0.543389	NA	0.37	NA	3.299178
1322	5	149602363	149602363	T	A	intronic	CAMK2A	NA	NA	NA	intronic	ENSG00000070808	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs17712679	0.31	0.31	0.291	0.309904	0.3419	0.1558	0.3862	0.3759	0.2924	0.35	0.16	0.39	0.38	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.510963	NA	NA	0.359208	0.356936	NA	0.384	NA	3.298892
1322	12	100709313	100709313	T	A	intronic	SCYL2	NA	NA	NA	intronic	ENSG00000136021	NA	NA	NA	NA	NA	12q23.1	NA	NA	NA	NA	rs7968030	0.18	0.18	0.066	0.176518	0.2833	0.0823	0.2594	0.1014	0.2065	0.27	0.1	0.26	0.09	0.2448	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.187564	NA	NA	0.173584	0.077362	NA	0.051	NA	3.298316
1322	10	90767395	90767395	G	C	intronic	FAS	NA	NA	NA	intronic	ENSG00000026103	NA	NA	NA	NA	NA	10q23.31	NA	NA	NA	NA	rs2031611	0.79	0.79	0.786	0.808706	0.7018	0.9573	0.8026	0.7693	0.8231	0.7	0.96	0.77	0.75	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.531746	NA	NA	NA	NA	NA	0.754	NA	3.2982
1322	12	76509532	76509532	T	G	intergenic	NAP1L1,BBS10	dist=30794;dist=228734	NA	NA	ncRNA_exonic	ENSG00000258304	NA	NA	NA	NA	NA	12q21.2	NA	NA	NA	NA	rs4077263	0.7	0.7	0.685	0.703874	0.7018	0.8909	0.7291	0.4478	0.8415	0.7	0.9	0.69	0.48	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.558172	NA	NA	NA	NA	NA	0.609	NA	3.2982
1322	14	103918182	103918182	G	C	intronic	MARK3	NA	NA	NA	intronic	ENSG00000075413	NA	NA	NA	NA	NA	14q32.32	NA	NA	NA	NA	rs2273702	0.59	0.59	0.568	0.535942	0.7018	0.501	0.6225	0.4319	0.4806	0.71	0.5	0.67	0.44	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.389581	NA	NA	NA	NA	NA	0.543	NA	3.2982
1322	16	9010213	9010213	T	G	intronic	USP7	NA	NA	NA	intronic	ENSG00000187555	NA	NA	NA	NA	NA	16p13.2	NA	NA	NA	NA	rs7195624	0.62	0.62	0.632	0.628395	0.7018	0.6458	0.5692	0.587	0.6329	0.69	0.63	0.56	0.57	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.038906	NA	NA	NA	NA	NA	0.601	NA	3.2982
1322	19	8156290	8156290	A	G	intronic	FBN3	NA	NA	NA	intronic	ENSG00000142449	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs8104453	0.69	0.69	0.716	0.671126	0.7018	0.4623	0.7089	0.9395	0.4652	0.7	0.47	0.7	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.103998	NA	NA	NA	NA	NA	0.667	NA	3.2982
1322	10	129202729	129202729	G	T	intronic	DOCK1	NA	NA	NA	intronic	ENSG00000150760	NA	NA	NA	NA	NA	10q26.2	NA	NA	NA	NA	rs2296630	0.23	0.23	0.211	0.227636	0.2366	0.2827	0.2176	0.1604	0.2597	0.25	0.25	0.25	0.16	0.2369	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.34177	NA	NA	0.228859	0.167194	NA	0.239	NA	3.297641
1322	5	635709	635709	C	T	intronic	CEP72	NA	NA	NA	intronic	ENSG00000112877	NA	NA	NA	NA	NA	5p15.33	NA	NA	NA	NA	rs1697985	0.3	0.3	0.278	0.282947	0.2286	0.4683	0.2522	0.3086	0.135	0.23	0.43	0.25	0.32	0.246	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.327296	NA	NA	0.227791	0.283477	NA	0.29	NA	3.297609
1322	1	103483514	103483514	C	T	intronic	COL11A1	NA	NA	NA	intronic	ENSG00000060718	NA	NA	NA	NA	NA	1p21.1	NA	NA	NA	NA	rs945748	0.65	0.65	0.632	0.638978	0.7028	0.9117	0.6902	0.2012	0.8476	0.71	0.91	0.72	0.22	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.184604	NA	NA	NA	NA	NA	0.674	NA	3.2972
1322	2	63605430	63605430	A	G	intronic	WDPCP	NA	NA	NA	intronic	ENSG00000143951	NA	NA	NA	NA	NA	2p15	NA	NA	NA	NA	rs2292795	0.85	0.85	0.861	0.873802	0.7028	0.9524	0.8386	0.9788	0.8517	0.72	0.96	0.8	0.95	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.346031	NA	NA	NA	NA	NA	0.877	NA	3.2972
1322	2	197066175	197066175	T	G	intronic	HECW2	NA	NA	NA	intronic	ENSG00000138411	NA	NA	NA	NA	NA	2q32.3	NA	NA	NA	NA	rs4566380	0.72	0.72	0.646	0.724641	0.7028	0.8343	0.768	0.6014	0.7699	0.7	0.85	0.73	0.61	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.848046	NA	NA	NA	NA	NA	0.514	NA	3.2972
1322	5	5232398	5232398	G	A	intronic	ADAMTS16	NA	NA	NA	intronic	ENSG00000145536	NA	NA	NA	NA	NA	5p15.32	NA	NA	NA	NA	rs2913624	0.77	0.77	0.776	0.765575	0.7028	0.7937	0.7349	0.882	0.6656	0.71	0.76	0.75	0.89	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.784441	NA	NA	NA	NA	NA	0.717	NA	3.2972
1322	6	56468537	56468537	T	C	ncRNA_intronic	RNU6-71P	NA	NA	NA	intronic	ENSG00000151914	NA	NA	NA	NA	NA	6p12.1	NA	NA	NA	NA	rs9382656	0.27	0.27	0.266	0.245008	0.3529	0.2292	0.3444	0.1422	0.2188	0.34	0.23	0.35	0.15	0.3169	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.736143	NA	NA	0.366399	0.190639	NA	0.304	NA	3.2971343
1322	19	39406442	39406442	G	A	intronic	SARS2	NA	NA	NA	intronic	ENSG00000104835,ENSG00000269547	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs11670675	0.18	0.18	0.148	0.178315	0.2416	0.2054	0.1513	0.0189	0.32	0.23	0.22	0.17	0.03	0.2203	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.935698	NA	NA	0.241103	0.054748	NA	0.196	NA	3.296997
1322	1	201861016	201861016	C	G	UTR3	SHISA4	NM_198149:c.*42C>G	NA	NA	UTR3	ENSG00000198892	ENST00000362011:c.*42C>G	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs2279681	0.33	0.33	0.327	0.298522	0.3618	0.3552	0.2262	0.2806	0.2505	0.36	0.4	0.27	0.24	0.3225	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.979257	2.979257	NA	0.352209	0.286201	NA	0.406	NA	3.2968244
1322	16	313406	313406	A	G	intronic	ITFG3	NA	NA	NA	intronic	ENSG00000167930,ENSG00000269881	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs7189326	0.38	0.38	0.375	0.400958	0.1998	0.4732	0.3285	0.6346	0.2689	0.19	0.46	0.3	0.63	0.2863	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.301995	NA	NA	0.217253	0.514326	NA	0.377	NA	3.296647
1322	4	189745585	189745585	T	A	intergenic	LOC401164,FRG1	dist=222523;dist=1116389	NA	NA	intergenic	ENSG00000250626,ENSG00000250024	dist=27798;dist=166284	NA	NA	NA	NA	4q35.2	NA	NA	NA	NA	rs141225288	0.02	0.02	0.016	0.0251597	0.0368	0.001	0.0259	0.0295	0.0317	0.03	NA	0.01	0.04	NA	0.04	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.627759	NA	NA	NA	NA	NA	0.022	NA	3.2965334
1322	3	194379596	194379596	C	A	intronic	LSG1	NA	NA	NA	intronic	ENSG00000041802	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs1705971	0.66	0.66	0.632	0.63738	0.7038	0.8651	0.6282	0.3366	0.7474	0.72	0.86	0.63	0.35	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.725209	NA	NA	NA	NA	NA	0.543	NA	3.2962
1322	3	194390617	194390617	G	C	intronic	LSG1	NA	NA	NA	intronic	ENSG00000041802	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs1773230	0.67	0.67	0.651	0.667332	0.7038	0.8651	0.6412	0.4433	0.7474	0.7	0.85	0.63	0.45	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.062578	NA	NA	NA	NA	NA	0.609	NA	3.2962
1322	7	107303628	107303628	C	T	intronic	SLC26A4	NA	NA	NA	intronic	ENSG00000091137	NA	NA	NA	NA	NA	7q22.3	NA	NA	NA	NA	rs2248465	0.62	0.62	0.619	0.658546	0.7038	0.4782	0.7046	0.6505	0.7761	0.7	0.44	0.68	0.67	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.493637	NA	NA	NA	NA	NA	0.652	NA	3.2962
1322	8	70856897	70856897	A	G	intergenic	SLCO5A1,PRDM14	dist=109598;dist=106989	NA	NA	downstream	ENSG00000247570	NA	NA	NA	NA	NA	8q13.3	NA	NA	NA	NA	rs17671808	0.16	0.16	0.156	0.173522	0.2038	0.0972	0.2205	0.1112	0.272	0.18	0.13	0.22	0.13	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.472202	NA	NA	NA	NA	NA	0.181	NA	3.2962
1322	10	81318545	81318545	A	T	intronic	SFTPA2	NA	NA	NA	intronic	ENSG00000185303	NA	NA	NA	NA	NA	10q22.3	NA	NA	NA	NA	rs2217231	0.68	0.68	0.712	0.685104	0.7038	0.4554	0.7493	0.8676	0.6104	0.72	0.42	0.74	0.9	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.008722	NA	NA	NA	NA	NA	0.804	NA	3.2962
1322	11	123597804	123597804	A	G	intronic	ZNF202	NA	NA	NA	intronic	ENSG00000166261	NA	NA	NA	NA	NA	11q24.1	NA	NA	NA	NA	rs679597	0.66	0.66	0.665	0.661542	0.7038	0.4812	0.6715	0.7542	0.6718	0.69	0.51	0.72	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.568037	NA	NA	NA	NA	NA	0.558	NA	3.2962
1322	17	59372034	59372034	T	G	intronic	BCAS3	NA	NA	NA	intronic	ENSG00000141376	NA	NA	NA	NA	NA	17q23.2	NA	NA	NA	NA	rs12948356	0.62	0.62	0.571	0.618411	0.7038	0.7698	0.7781	0.2943	0.6994	0.69	0.75	0.76	0.28	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.545697	1.545697	NA	NA	NA	NA	0.384	NA	3.2962
1322	19	49424354	49424354	C	T	intronic	NUCB1	NA	NA	NA	intronic	ENSG00000104805	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs12979307	0.45	0.45	0.425	0.449281	0.7038	0.3859	0.5749	0.0386	0.7188	0.72	0.37	0.57	0.07	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.056605	NA	NA	NA	NA	NA	0.391	NA	3.2962
1322	19	7712193	7712193	G	A	intronic	STXBP2	NA	NA	NA	intronic	ENSG00000076944	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs809916	0.2	0.2	0.175	0.171925	0.2614	0.1032	0.2147	0.1672	0.1268	0.26	0.11	0.24	0.19	0.2103	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.21104	NA	NA	0.232287	0.186335	NA	0.188	NA	3.296013
1322	2	43799070	43799070	C	T	intronic	THADA	NA	NA	NA	intronic	ENSG00000115970	NA	NA	NA	NA	NA	2p21	NA	NA	NA	NA	rs3752355	0.63	0.63	0.664	0.64357	0.7048	0.2897	0.4582	0.9213	0.7014	0.7	0.32	0.51	0.95	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.080959	NA	NA	NA	NA	NA	0.688	NA	3.2952
1322	5	127613791	127613791	C	G	intronic	FBN2	NA	NA	NA	intronic	ENSG00000138829	NA	NA	NA	NA	NA	5q23.3	NA	NA	NA	NA	rs426987	0.73	0.73	0.734	0.725839	0.7048	0.8532	0.7133	0.6059	0.7873	0.72	0.86	0.69	0.62	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.173807	NA	NA	NA	NA	NA	0.572	NA	3.2952
1322	7	50799889	50799889	C	T	intronic	GRB10	NA	NA	NA	intronic	ENSG00000106070	NA	NA	NA	NA	NA	7p12.1	NA	NA	NA	NA	rs2074777	0.57	0.57	0.538	0.560304	0.7048	0.756	0.5591	0.2231	0.6667	0.69	0.72	0.59	0.21	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.024495	NA	NA	NA	NA	NA	0.565	NA	3.2952
1322	19	49424925	49424925	C	T	intronic	NUCB1	NA	NA	NA	intronic	ENSG00000104805	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs11671777	0.46	0.46	0.419	0.448482	0.7048	0.3859	0.5749	0.0386	0.7137	0.72	0.37	0.57	0.07	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.302886	NA	NA	NA	NA	NA	0.406	NA	3.2952
1323	9	116810890	116810890	A	G	intronic	ZNF618	NA	NA	NA	intronic	ENSG00000157657	NA	NA	NA	NA	NA	9q32	NA	NA	NA	NA	rs3827675	0.17	0.17	0.135	0.172125	0.2654	0.0476	0.2594	0.0703	0.2802	0.27	0.05	0.26	0.08	0.2086	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.318427	NA	NA	0.231297	0.086763	NA	0.167	NA	3.294703
1323	14	96135857	96135857	C	T	ncRNA_intronic	TCL6	NA	NA	NA	ncRNA_exonic	ENSG00000187621	NA	NA	NA	NA	NA	14q32.13	NA	NA	NA	NA	rs1748965	0.4	0.4	0.361	0.41254	0.4493	0.5556	0.4712	0.0847	0.6288	0.47	0.54	0.48	0.08	0.4577	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.745702	NA	NA	0.465	0.159101	NA	0.428	NA	3.2946666
1323	2	234104029	234104029	G	A	intronic	INPP5D	NA	NA	NA	intronic	ENSG00000168918	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs6706611	0.27	0.27	0.25	0.276558	0.2346	0.3522	0.3631	0.1906	0.2965	0.23	0.33	0.33	0.22	0.2482	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.136761	NA	NA	0.222877	0.196684	NA	0.21	NA	3.294323
1323	1	183085696	183085696	A	G	intronic	LAMC1	NA	NA	NA	intronic	ENSG00000135862	NA	NA	NA	NA	NA	1q25.3	NA	NA	Name=15	NA	rs6424888	0.53	0.53	0.502	0.530152	0.5636	0.628	0.6254	0.3268	0.6022	0.57	0.58	0.58	0.38	0.5727	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.556688	NA	NA	0.569419	0.373808	NA	0.442	NA	3.294281
1323	3	109050980	109050980	T	C	intronic	DPPA4	NA	NA	NA	intronic	ENSG00000121570	NA	NA	NA	NA	NA	3q13.13	NA	NA	NA	NA	rs1163438	0.85	0.85	0.84	0.886182	0.7058	0.999	0.8156	0.9546	0.9131	0.71	1	0.79	0.94	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.005518	NA	NA	NA	NA	NA	0.775	NA	3.2942
1323	20	44418471	44418471	G	C	intronic	WFDC3	NA	NA	NA	intronic	ENSG00000124116	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs411945	0.69	0.69	0.69	0.670327	0.7058	0.6458	0.7968	0.6944	0.5368	0.73	0.62	0.77	0.65	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.187788	NA	NA	NA	NA	NA	0.79	NA	3.2942
1323	22	30730711	30730711	A	G	intronic	SF3A1	NA	NA	NA	intronic	ENSG00000099995	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs5749063	0.18	0.18	0.165	0.153754	0.2535	0.1448	0.1571	0.1324	0.0869	0.24	0.12	0.17	0.14	0.1961	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.070827	NA	NA	0.256279	0.151384	NA	0.275	NA	3.294121
1323	1	45479772	45479772	G	T	intronic	UROD	NA	NA	NA	intronic	ENSG00000126088	NA	NA	NA	NA	NA	1p34.1	NA	NA	NA	NA	rs11211066	0.24	0.24	0.21	0.245607	0.2087	0.2887	0.4107	0.1551	0.2444	0.21	0.27	0.34	0.16	0.2563	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.564237	NA	NA	0.24093	0.164094	NA	0.341	NA	3.29407
1323	17	74396421	74396421	G	C	intronic	UBE2O	NA	NA	NA	intronic	ENSG00000175931	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs3809691	0.36	0.36	0.379	0.348442	0.2068	0.4891	0.2911	0.4433	0.2618	0.2	0.53	0.3	0.46	0.2704	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.123974	NA	NA	0.228953	0.4133	NA	0.442	NA	3.293847
1323	16	1551826	1551826	C	G	intronic	TELO2	NA	NA	NA	intronic	ENSG00000100726	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs72779276	0.13	0.13	0.138	0.0880591	0.2634	NA	0.1657	0.0204	0.0348	0.28	NA	0.19	0.02	0.1801	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.39879	NA	NA	0.262701	0.053747	NA	0.145	NA	3.293799
1323	1	156708244	156708244	C	T	intronic	MRPL24	NA	NA	NA	intronic	ENSG00000143314	NA	NA	NA	NA	NA	1q23.1	NA	NA	NA	NA	rs28697076	0.19	0.19	0.177	0.218251	0.2336	0.0833	0.2695	0.1838	0.3517	0.24	0.09	0.24	0.19	0.2318	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.13338	NA	NA	0.241395	0.222878	NA	0.246	NA	3.293205
1323	1	248138013	248138013	C	T	intronic	OR2L13	NA	NA	NA	intronic	ENSG00000196071	NA	NA	NA	NA	NA	1q44	NA	NA	NA	NA	rs12736548	0.45	0.45	0.404	0.448083	0.7068	0.3353	0.6542	0.0477	0.6933	0.7	0.35	0.62	0.06	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.447884	NA	NA	NA	NA	NA	0.442	NA	3.2932
1323	3	14939364	14939364	G	A	intronic	FGD5	NA	NA	NA	intronic	ENSG00000154783	NA	NA	NA	NA	NA	3p25.1	NA	NA	NA	NA	rs2117774	0.69	0.69	0.69	0.703874	0.7068	0.5942	0.696	0.8419	0.6329	0.7	0.56	0.7	0.83	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.464049	NA	NA	NA	NA	NA	0.696	NA	3.2932
1323	3	14939679	14939679	G	A	intronic	FGD5	NA	NA	NA	intronic	ENSG00000154783	NA	NA	NA	NA	NA	3p25.1	NA	NA	NA	NA	rs2307090	0.67	0.67	0.68	0.680312	0.7068	0.5942	0.6859	0.7579	0.6329	0.7	0.56	0.69	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.778488	NA	NA	NA	NA	NA	0.667	NA	3.2932
1323	5	118965623	118965623	A	G	intronic	FAM170A	NA	NA	NA	intronic	ENSG00000164334	NA	NA	NA	NA	NA	5q23.1	NA	NA	NA	NA	rs2434599	0.66	0.66	0.519	0.662939	0.7068	0.6171	0.6023	0.6135	0.7751	0.7	0.64	0.64	0.63	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.319705	NA	NA	NA	NA	NA	0.594	NA	3.2932
1323	16	113493	113493	G	C	intronic	RHBDF1	NA	NA	NA	intronic	ENSG00000007384	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs743724	0.67	0.67	0.628	0.672524	0.7068	0.748	0.7435	0.4569	0.8006	0.72	0.72	0.77	0.46	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.030215	NA	NA	NA	NA	NA	0.674	NA	3.2932
1323	17	7193448	7193448	A	G	intronic	YBX2	NA	NA	NA	intronic	ENSG00000006047	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs222838	0.5	0.5	0.47	0.472843	0.7068	0.3562	0.5331	0.3026	0.5399	0.7	0.36	0.59	0.28	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.444315	NA	NA	NA	NA	NA	0.478	NA	3.2932
1323	22	18843686	18843686	G	T	intergenic	GGT3P,DGCR6	dist=64212;dist=50050	NA	NA	ncRNA_intronic	ENSG00000161103,ENSG00000215544	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs2083330	0.74	0.74	0.746	0.746805	0.7068	0.7421	0.6513	0.8048	0.7822	0.76	0.69	0.68	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.029708	NA	NA	NA	NA	NA	NA	NA	3.2932
1323	1	152193121	152193121	G	T	exonic	HRNR	NA	synonymous SNV	HRNR:NM_001009931:exon3:c.C984A:p.G328G	exonic	ENSG00000197915	NA	synonymous SNV	ENSG00000197915:ENST00000368801:exon3:c.C984A:p.G328G	NA	NA	1q21.3	NA	NA	NA	NA	rs6587651	0.61	0.61	0.613	0.549321	0.83	0.3304	0.5576	0.5287	0.5082	0.82	0.36	0.63	0.53	0.7125	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.07596	NA	NA	0.831047	0.587608	ID=COSM146611;OCCURENCE=1(stomach)	0.725	NA	3.2931196
1323	19	7997676	7997676	G	A	intronic	TIMM44	NA	NA	NA	intronic	ENSG00000104980	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs2279528	0.24	0.24	0.188	0.223642	0.2217	0.4484	0.2493	0.0393	0.2249	0.23	0.42	0.25	0.03	0.2442	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.572368	1.572368	NA	0.241047	0.07626	NA	0.21	NA	3.293053
1323	2	175326258	175326258	G	T	intronic	GPR155	NA	NA	NA	intronic	ENSG00000163328	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	rs72910819	0.23	0.23	0.222	0.228035	0.2445	0.0149	0.2277	0.4554	0.1237	0.24	0.02	0.24	0.45	0.209	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.137757	NA	NA	0.253721	0.383114	ID=COSN166339;OCCURENCE=1(endometrium)	0.312	NA	3.292779
1323	6	36943513	36943513	G	C	intronic	MTCH1	NA	NA	NA	intronic	ENSG00000137409	NA	NA	NA	NA	NA	6p21.2	NA	NA	NA	NA	rs2293385	0.21	0.21	0.159	0.236422	0.2217	0.1062	0.2968	0.2231	0.3609	0.23	0.1	0.32	0.25	0.2405	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.459151	NA	NA	0.245116	0.221289	NA	0.203	NA	3.292684
1323	6	36711406	36711406	G	A	intronic	CPNE5	NA	NA	NA	intronic	ENSG00000124772	NA	NA	NA	NA	NA	6p21.2	NA	NA	NA	NA	rs3213534	0.27	0.27	0.281	0.242212	0.3499	0.1806	0.1844	0.267	0.2025	0.35	0.22	0.22	0.25	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.09476	NA	NA	0.357637	0.278902	NA	0.239	NA	3.292463
1323	2	71747432	71747432	G	T	intronic	DYSF	NA	NA	NA	intronic	ENSG00000135636	NA	NA	NA	NA	NA	2p13.2	NA	NA	NA	NA	rs11687223	0.56	0.56	0.55	0.563698	0.7078	0.2073	0.6326	0.7648	0.4622	0.69	0.17	0.63	0.77	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.538949	NA	NA	NA	NA	NA	0.638	NA	3.2922
1323	6	122743502	122743502	T	C	intronic	HSF2	NA	NA	NA	intronic	ENSG00000025156	NA	NA	NA	NA	NA	6q22.31	NA	NA	NA	NA	rs487487	0.71	0.71	0.686	0.713259	0.7078	0.6994	0.7378	0.6536	0.7965	0.72	0.72	0.74	0.65	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.105721	NA	NA	NA	NA	NA	0.739	NA	3.2922
1323	9	123929710	123929710	A	G	intronic	CNTRL	NA	NA	NA	intronic	ENSG00000119397	NA	NA	NA	NA	NA	9q33.2	NA	NA	NA	NA	rs10818513	0.75	0.75	0.723	0.767173	0.7078	0.9643	0.7767	0.5356	0.9315	0.71	0.98	0.79	0.54	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.690959	1.690959	NA	NA	NA	NA	0.688	NA	3.2922
1323	22	50688235	50688235	T	C	intronic	HDAC10	NA	NA	NA	intronic	ENSG00000100429	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs738334	0.82	0.82	0.813	0.871006	0.7078	0.8681	0.83	0.9849	0.9172	0.71	0.86	0.8	0.97	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.24215	NA	NA	NA	NA	NA	0.855	NA	3.2922
1323	6	42851396	42851396	G	A	intronic	RPL7L1	NA	NA	NA	intronic	ENSG00000146223	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs2395939	0.16	0.16	0.16	0.163139	0.2684	0.0228	0.183	0.1369	0.2209	0.26	0.02	0.2	0.14	0.1982	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.236005	NA	NA	0.241279	0.148661	NA	0.152	NA	3.292121
1323	8	7154917	7154917	A	C	intergenic	LOC349196,FAM66B	dist=11037;dist=4216	NA	NA	ncRNA_exonic	ENSG00000233295	NA	NA	NA	NA	NA	8p23.1	NA	NA	NA	NA	rs62488791	0.28	0.28	0.178	0.242612	0.3857	0.3254	0.2046	0.0703	0.2699	0.37	0.3	0.22	0.16	0.3226	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.248905	NA	1	NA	NA	NA	NA	NA	3.2917
1323	7	99474729	99474729	T	C	upstream	OR2AE1	NA	NA	NA	intronic	ENSG00000146833	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs2572022	0.56	0.56	0.583	0.589657	0.5417	0.2927	0.4625	0.9349	0.5685	0.56	0.26	0.51	0.94	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.690459	NA	NA	NA	NA	NA	0.623	NA	3.2916333
1323	1	152193291	152193291	G	T	exonic	HRNR	NA	synonymous SNV	HRNR:NM_001009931:exon3:c.C814A:p.R272R	exonic	ENSG00000197915	NA	synonymous SNV	ENSG00000197915:ENST00000368801:exon3:c.C814A:p.R272R	NA	NA	1q21.3	NA	NA	NA	NA	rs6587652	0.61	0.61	0.586	0.560104	0.83	0.38	0.5576	0.5295	0.5112	0.82	0.37	0.63	0.53	0.7141	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.047383	NA	NA	0.831047	0.588289	ID=COSM146614;OCCURENCE=1(stomach)	0.725	NA	3.2915196
1323	6	40998344	40998344	G	C	intronic	UNC5CL	NA	NA	NA	intronic	ENSG00000124602	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs9369256	0.22	0.22	0.216	0.261781	0.1998	0.2738	0.2594	0.2194	0.3722	0.2	0.26	0.25	0.18	0.2681	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.351765	NA	NA	0.240581	0.216069	NA	0.174	NA	3.291519
1323	1	152191879	152191879	G	A	exonic	HRNR	NA	synonymous SNV	HRNR:NM_001009931:exon3:c.C2226T:p.H742H	exonic	ENSG00000197915	NA	synonymous SNV	ENSG00000197915:ENST00000368801:exon3:c.C2226T:p.H742H	NA	NA	1q21.3	NA	NA	NA	NA	rs10788828	0.61	0.61	0.607	0.560104	0.83	0.38	0.5576	0.528	0.5133	0.82	0.37	0.63	0.53	0.7143	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.513146	NA	NA	0.83093	0.588743	NA	0.71	NA	3.2914366
1323	2	170668106	170668106	G	A	intronic	SSB	NA	NA	NA	intronic	ENSG00000138382,ENSG00000138385	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	rs2246149	0.59	0.59	0.557	0.563498	0.7087	0.4653	0.7248	0.4781	0.5164	0.7	0.48	0.71	0.46	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.687535	NA	NA	NA	NA	NA	0.63	NA	3.2913
1323	6	160481537	160481537	T	C	intronic	IGF2R	NA	NA	NA	intronic	ENSG00000197081	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs7746102	0.29	0.29	0.275	0.286542	0.2068	0.3383	0.2925	0.3601	0.2117	0.2	0.36	0.29	0.33	0.2695	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.335362	NA	NA	0.232442	0.342488	NA	0.348	NA	3.291258
1323	1	183099701	183099701	G	A	intronic	LAMC1	NA	NA	NA	intronic	ENSG00000135862	NA	NA	NA	NA	NA	1q25.3	NA	NA	Name=17	NA	rs2296300	0.53	0.53	0.495	0.531749	0.5636	0.628	0.6254	0.3321	0.6033	0.57	0.58	0.58	0.38	0.576	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.076511	NA	NA	0.569419	0.374716	NA	0.464	NA	3.290981
1323	2	1426787	1426787	G	A	intronic	TPO	NA	NA	NA	intronic	ENSG00000115705	NA	NA	NA	NA	NA	2p25.3	NA	NA	NA	NA	rs2276701	0.22	0.22	0.198	0.230631	0.2435	0.1915	0.3156	0.1762	0.271	0.23	0.16	0.32	0.18	0.2369	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.143228	NA	NA	0.228953	0.184067	NA	0.283	NA	3.290647
1323	16	57741346	57741346	C	T	intronic	CCDC135	NA	NA	NA	intronic	ENSG00000159625	NA	NA	NA	NA	NA	16q21	NA	NA	NA	NA	rs12933056	0.18	0.18	0.176	0.184305	0.2386	0.1558	0.1297	0.1483	0.2454	0.24	0.15	0.13	0.14	0.2416	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.776033	NA	NA	0.22923	0.154529	NA	0.116	NA	3.29057
1323	12	121431272	121431272	T	A	intronic	HNF1A	NA	NA	NA	intronic	ENSG00000135100	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs2071190	0.26	0.26	0.222	0.252396	0.2356	0.2728	0.3775	0.236	0.182	0.24	0.24	0.33	0.27	0.2354	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.16982	NA	NA	0.238605	0.249887	NA	0.239	NA	3.290395
1323	2	26110057	26110057	G	A	intergenic	ASXL2,KIF3C	dist=8745;dist=39398	NA	NA	ncRNA_exonic	ENSG00000217718	NA	NA	NA	NA	NA	2p23.3	NA	NA	NA	NA	rs3845681	0.45	0.45	0.428	0.476438	0.7097	0.1389	0.4841	0.3828	0.7055	0.71	0.12	0.5	0.38	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.75905	NA	NA	NA	NA	NA	0.551	NA	3.2903
1323	2	26110064	26110064	A	T	intergenic	ASXL2,KIF3C	dist=8752;dist=39391	NA	NA	ncRNA_exonic	ENSG00000217718	NA	NA	NA	NA	NA	2p23.3	NA	NA	NA	NA	rs3845682	0.47	0.47	0.456	0.502396	0.7097	0.1389	0.4899	0.4781	0.7055	0.71	0.12	0.51	0.46	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.600858	NA	NA	NA	NA	NA	0.565	NA	3.2903
1323	7	107303622	107303622	A	T	intronic	SLC26A4	NA	NA	NA	intronic	ENSG00000091137	NA	NA	NA	NA	NA	7q22.3	NA	NA	NA	NA	rs2248464	0.73	0.73	0.745	0.764577	0.7097	0.7133	0.7349	0.8003	0.8466	0.7	0.7	0.72	0.83	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.010768	NA	NA	NA	NA	NA	0.754	NA	3.2903
1323	16	78389752	78389752	C	T	intronic	WWOX	NA	NA	NA	intronic	ENSG00000186153	NA	NA	NA	NA	NA	16q23.1	NA	NA	NA	NA	rs7200865	0.57	0.57	0.578	0.568091	0.7097	0.1815	0.5101	0.8472	0.4847	0.71	0.19	0.54	0.81	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.45975	NA	NA	NA	NA	NA	0.543	NA	3.2903
1323	16	78389789	78389789	T	G	intronic	WWOX	NA	NA	NA	intronic	ENSG00000186153	NA	NA	NA	NA	NA	16q23.1	NA	NA	NA	NA	rs7206533	0.57	0.57	0.587	0.56869	0.7097	0.1815	0.5115	0.8472	0.4867	0.71	0.19	0.55	0.81	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.248109	NA	NA	NA	NA	NA	0.565	NA	3.2903
1323	1	12837634	12837634	T	A	exonic	PRAMEF12	NA	synonymous SNV	PRAMEF12:NM_001080830:exon3:c.T1344A:p.I448I	exonic	ENSG00000116726	NA	synonymous SNV	ENSG00000116726:ENST00000357726:exon3:c.T1344A:p.I448I	NA	NA	1p36.21	NA	NA	NA	NA	rs848578	0.7	0.7	0.668	0.663339	0.8012	0.7192	0.8055	0.3729	0.7556	0.82	0.73	0.8	0.4	0.7635	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.363483	NA	NA	0.811744	0.429414	NA	0.601	NA	3.2902226
1323	2	30682630	30682630	T	A	intronic	LCLAT1	NA	NA	NA	intronic	ENSG00000172954	NA	NA	NA	NA	NA	2p23.1	NA	NA	NA	NA	rs829573	0.27	0.27	0.233	0.264377	0.2256	0.3651	0.2608	0.1861	0.3088	0.25	0.34	0.25	0.22	0.2509	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.359583	NA	NA	0.233372	0.187472	NA	0.29	NA	3.290128
1323	14	20841313	20841313	G	A	intronic	TEP1	NA	NA	NA	intronic	ENSG00000129566	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs1713448	0.36	0.36	0.383	0.379393	0.2247	0.3056	0.3804	0.6596	0.2352	0.23	0.3	0.33	0.66	0.2758	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.00495	NA	NA	0.209419	0.559237	NA	0.355	NA	3.290081
1323	10	100167322	100167322	C	T	intronic	PYROXD2	NA	NA	NA	intronic	ENSG00000119943	NA	NA	NA	NA	NA	10q24.2	NA	NA	NA	NA	rs11189595	0.24	0.24	0.222	0.252396	0.2018	0.3353	0.2752	0.1082	0.3978	0.2	0.37	0.26	0.12	0.2711	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.192982	NA	NA	0.237674	0.139355	NA	0.145	NA	3.289426
1323	12	21807687	21807687	C	G	intronic	LDHB	NA	NA	NA	intronic	ENSG00000111716	NA	NA	NA	NA	NA	12p12.1	NA	NA	NA	NA	rs7953579	0.75	0.75	0.742	0.716653	0.7107	0.876	0.7983	0.6097	0.6452	0.7	0.87	0.78	0.64	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.704333	NA	NA	NA	NA	NA	0.681	NA	3.2893
1323	5	180048056	180048056	C	T	intronic	FLT4	NA	NA	NA	intronic	ENSG00000037280	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs2242214	0.23	0.23	0.23	0.243211	0.2217	0.255	0.1585	0.2648	0.2843	0.21	0.27	0.2	0.23	0.2422	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.382802	NA	NA	0.247031	0.251475	NA	0.355	NA	3.289069
1323	21	10862599	10862599	C	T	intergenic	TEKT4P2,TPTE	dist=894006;dist=44144	NA	NA	upstream	ENSG00000169861	NA	NA	NA	Score=278;Name=lod=18	NA	21p11.2	NA	NA	NA	NA	rs3883945	NA	NA	0.523	0.549521	0.6252	0.5546	0.5461	0.4818	0.5603	NA	NA	NA	NA	0.5859	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.687115	NA	NA	NA	NA	NA	0.558	NA	3.2889
1323	17	38130492	38130492	T	C	intronic	GSDMA	NA	NA	NA	intronic	ENSG00000167914	NA	NA	NA	NA	NA	17q21.1	NA	NA	NA	NA	rs62066853	0.24	0.24	0.178	0.202276	0.2256	0.4276	0.2565	0.025	0.1472	0.23	0.41	0.25	0.03	0.2531	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.170126	NA	NA	0.232872	0.063774	NA	0.21	NA	3.288428
1323	6	32441100	32441100	A	C	intergenic	HLA-DRA,HLA-DRB5	dist=28274;dist=44054	NA	NA	ncRNA_intronic	ENSG00000196301	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs9269081	0.68	0.68	0.663	0.676518	0.7117	0.631	0.8026	0.646	0.6391	0.72	0.62	0.79	0.62	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.662057	NA	NA	NA	NA	NA	0.696	NA	3.2883
1323	13	47466781	47466781	T	G	intronic	HTR2A	NA	NA	NA	intronic	ENSG00000102468	NA	NA	NA	NA	NA	13q14.2	NA	NA	NA	NA	rs2296973	0.71	0.71	0.698	0.715655	0.7117	0.6726	0.6744	0.8154	0.6585	0.72	0.59	0.71	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.802908	NA	NA	NA	NA	NA	0.761	NA	3.2883
1323	14	101409763	101409763	A	G	intergenic	SNORD113-7,SNORD113-9	dist=2225;dist=2223	NA	NA	ncRNA_intronic	ENSG00000225746	NA	NA	NA	NA	NA	14q32.31	NA	NA	NA	NA	rs35829821	0.14	0.14	0.128	0.110823	0.2594	0.0645	0.1412	0.0121	0.1176	0.25	0.07	0.17	0.01	0.1836	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.999131	NA	NA	0.26896	0.060502	NA	0.232	NA	3.28804
1323	7	138601473	138601473	C	T	intronic	KIAA1549	NA	NA	NA	intronic	ENSG00000122778	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs1958658	0.21	0.21	0.211	0.201278	0.2545	0.0665	0.1542	0.348	0.1207	0.25	0.08	0.15	0.36	0.2281	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.823542	NA	NA	0.229436	0.322084	NA	0.239	NA	3.287964
1323	11	280817	280817	T	C	exonic	NLRP6	NA	synonymous SNV	NLRP6:NM_001276700:exon4:c.T1083C:p.Y361Y,NLRP6:NM_138329:exon4:c.T1083C:p.Y361Y	exonic	ENSG00000174885	NA	synonymous SNV	ENSG00000174885:ENST00000312165:exon4:c.T1083C:p.Y361Y,ENSG00000174885:ENST00000534750:exon4:c.T1083C:p.Y361Y	NA	NA	11p15.5	NA	NA	NA	NA	rs7482279	0.65	0.65	0.258	0.700879	0.8807	0.2877	0.8228	0.8169	0.6984	0.81	0.25	0.81	0.76	0.7934	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.836182	NA	NA	0.704651	0.617567	NA	NA	NA	3.2879156
1323	1	112020224	112020224	C	A	intronic	C1orf162	NA	NA	NA	intronic	ENSG00000143110	NA	NA	NA	NA	NA	1p13.2	NA	NA	NA	NA	rs115634476	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.7121	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.568726	NA	NA	NA	NA	NA	NA	NA	3.2879
1323	6	38718402	38718402	G	A	intronic	DNAH8	NA	NA	NA	intronic	ENSG00000124721	NA	NA	NA	NA	NA	6p21.2	NA	NA	NA	NA	rs56148146	0.12	0.12	0.112	0.104034	0.2435	0.004	0.1599	0.0212	0.136	0.25	0.0035	0.17	0.02	0.1974	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.590257	NA	NA	0.271279	0.064231	NA	0.13	NA	3.287821
1323	5	161292685	161292685	C	T	intronic	GABRA1	NA	NA	NA	intronic	ENSG00000022355	NA	NA	NA	NA	NA	5q34	NA	NA	NA	NA	rs41304896	0.2	0.2	0.188	0.173722	0.2575	0.2371	0.1888	0.0272	0.2096	0.27	0.26	0.23	0.02	0.2212	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.539396	NA	NA	0.233837	0.054471	NA	0.152	NA	3.287463
1323	19	50941000	50941000	A	G	intronic	MYBPC2	NA	NA	NA	intronic	ENSG00000086967	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs73054411	0.19	0.19	0.175	0.195887	0.2356	0.1012	0.2161	0.1717	0.271	0.25	0.09	0.19	0.2	0.2443	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.306649	NA	NA	0.232674	0.160886	NA	0.181	NA	3.287426
1323	14	73961841	73961841	T	C	intronic	HEATR4	NA	NA	NA	intronic	ENSG00000187105	NA	NA	NA	NA	NA	14q24.3	NA	NA	NA	NA	rs1019056	0.81	0.81	0.804	0.816094	0.7127	0.8353	0.8112	0.9455	0.7311	0.71	0.84	0.79	0.95	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.264856	NA	NA	NA	NA	NA	0.775	NA	3.2873
1323	14	107057859	107057859	G	A	intergenic	LINC00221,NONE	dist=106330;dist=NONE	NA	NA	upstream	ENSG00000253689	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs2009697	0.3	0.3	0.282	0.366414	0.2127	0.503	0.3401	0.236	0.5787	0.21	0.49	0.29	0.24	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.718502	NA	NA	NA	NA	NA	0.232	NA	3.2873
1323	18	11644325	11644325	G	A	intergenic	PIEZO2,GNAL	dist=495564;dist=44689	NA	NA	upstream	ENSG00000267773	NA	NA	NA	NA	NA	18p11.21	NA	NA	NA	NA	rs111598097	0.1	0.1	0.089	0.0846645	0.2127	0.005	0.1124	0.0129	0.1125	0.21	NA	0.12	0.02	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.531802	NA	NA	NA	NA	NA	0.159	NA	3.2873
1323	19	36558113	36558113	T	C	intronic	WDR62	NA	NA	NA	intronic	ENSG00000075702	NA	NA	NA	NA	NA	19q13.12	NA	NA	NA	NA	rs12608517	0.78	0.78	0.78	0.782149	0.7127	0.8274	0.7925	0.829	0.7362	0.72	0.82	0.76	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.570897	NA	NA	NA	NA	NA	0.681	NA	3.2873
1323	15	75044238	75044238	G	A	intronic	CYP1A2	NA	NA	NA	intronic	ENSG00000140505	NA	NA	NA	NA	Name=Caffeine consumption	15q24.1	NA	NA	NA	NA	rs2472304	0.32	0.32	0.285	0.238019	0.5994	0.1637	0.3271	0.0333	0.1564	0.59	0.16	0.38	0.04	0.4586	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.150686	NA	NA	0.654795	0.133591	NA	0.399	NA	3.287205
1323	6	152542548	152542548	A	G	intronic	SYNE1	NA	NA	NA	intronic	ENSG00000131018	NA	NA	NA	NA	NA	6q25.2	NA	NA	NA	NA	rs9383976	0.33	0.33	0.311	0.337859	0.2078	0.5367	0.2493	0.2995	0.3814	0.23	0.55	0.25	0.28	0.2805	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.336821	NA	NA	0.224767	0.320472	NA	0.333	NA	3.286933
1323	13	53009048	53009048	C	T	intronic	VPS36	NA	NA	NA	intronic	ENSG00000136100	NA	NA	NA	NA	NA	13q14.3	NA	NA	Name=17	NA	rs11148252	0.51	0.51	0.485	0.458267	0.6044	0.629	0.572	0.1604	0.454	0.59	0.62	0.57	0.19	0.5388	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.085755	NA	NA	0.569884	0.219927	NA	0.413	NA	3.286916
1323	4	177082032	177082032	A	G	intronic	WDR17	NA	NA	NA	intronic	ENSG00000150627	NA	NA	NA	NA	NA	4q34.2	NA	NA	NA	NA	rs10520338	0.16	0.16	0.152	0.16234	0.2545	0.1677	0.1268	0.0333	0.2618	0.25	0.15	0.16	0.04	0.214	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.152738	NA	NA	0.244884	0.0665	NA	0.109	NA	3.286616
1323	20	2542669	2542669	C	T	intronic	TMC2	NA	NA	NA	intronic	ENSG00000149488	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs7270277	0.34	0.34	0.318	NA	NA	NA	NA	NA	NA	0.32	0.51	0.33	0.18	0.3499	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.182183	NA	NA	0.363488	0.200182	NA	0.246	NA	3.286612
1323	16	23563501	23563501	C	T	exonic	EARS2	NA	synonymous SNV	EARS2:NM_001083614:exon2:c.G264A:p.A88A	exonic	ENSG00000103356	NA	synonymous SNV	ENSG00000103356:ENST00000449606:exon2:c.G264A:p.A88A,ENSG00000103356:ENST00000563232:exon2:c.G264A:p.A88A,ENSG00000103356:ENST00000563459:exon2:c.G264A:p.A88A,ENSG00000103356:ENST00000564501:exon2:c.G264A:p.A88A	NA	NA	16p12.2	NA	NA	NA	NA	rs7187920	0.7	0.7	0.7	0.67472	0.8131	0.6974	0.7233	0.5136	0.6922	0.81	0.67	0.75	0.53	0.7561	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.284951	1.284951	NA	0.811127	0.578582	NA	0.739	NA	3.2863396
1323	16	1272472	1272472	C	T	intronic	TPSG1	NA	NA	NA	intronic	ENSG00000116176	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs7198064	0.83	0.83	0.831	0.807308	0.7137	0.9673	0.7795	0.8767	0.6646	0.7	0.98	0.75	0.9	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.545333	NA	NA	NA	NA	NA	0.884	NA	3.2863
1323	19	18306751	18306751	G	A	intronic	MPV17L2	NA	NA	NA	intronic	ENSG00000254858	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs62120383	0.26	0.26	0.239	0.226238	0.3738	0.0893	0.2579	0.2685	0.136	0.39	0.09	0.28	0.27	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.233331	NA	NA	0.340352	0.274566	ID=COSN165762;OCCURENCE=1(NS)	0.217	NA	3.285848
1323	3	9798140	9798140	C	G	intronic	OGG1	NA	NA	NA	intronic	ENSG00000114026	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs2072668	0.33	0.33	0.315	0.335463	0.2028	0.5486	0.3026	0.2761	0.3558	0.2	0.54	0.31	0.28	0.281	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.509691	NA	NA	0.230698	0.269178	NA	0.283	NA	3.285502
1323	6	44108150	44108150	T	C	intronic	TMEM63B	NA	NA	NA	intronic	ENSG00000137216	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs7738970	0.26	0.26	0.227	0.251398	0.339	0.0437	0.3372	0.3192	0.2229	0.34	0.05	0.36	0.3	0.3755	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.102741	NA	NA	NA	NA	NA	0.377	NA	3.2855
1323	13	39542531	39542531	A	C	intronic	STOML3	NA	NA	NA	intronic	ENSG00000133115	NA	NA	NA	NA	NA	13q13.3	NA	NA	NA	NA	rs7323023	0.19	0.19	0.158	0.21226	0.2515	0.0794	0.232	0.23	0.271	0.23	0.07	0.25	0.21	0.2197	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.447696	NA	NA	0.243372	0.222878	NA	0.217	NA	3.285428
1323	2	231157512	231157512	A	G	intronic	SP140	NA	NA	NA	intronic	ENSG00000079263	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs6710297	0.14	0.14	0.129	0.121805	0.2485	0.003	0.1196	0.0749	0.1789	0.26	0.0017	0.14	0.1	0.2025	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.1026	NA	NA	0.263654	0.10005	NA	0.109	NA	3.285346
1323	2	71891236	71891236	C	T	intronic	DYSF	NA	NA	NA	intronic	ENSG00000135636	NA	NA	NA	NA	NA	2p13.2	NA	NA	NA	NA	rs2303598	0.62	0.62	0.588	0.609824	0.7147	0.6587	0.6225	0.4788	0.6196	0.71	0.64	0.67	0.46	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.516912	NA	NA	NA	NA	NA	0.565	NA	3.2853
1323	7	53255471	53255471	A	G	intergenic	POM121L12,FLJ45974	dist=150853;dist=467731	NA	NA	ncRNA_exonic	ENSG00000227344	NA	NA	NA	NA	NA	7p12.1	NA	NA	NA	NA	rs6943510	0.85	0.85	0.846	0.868211	0.7147	0.9415	0.8228	0.9773	0.8354	0.71	0.95	0.83	0.96	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.64198	NA	NA	NA	NA	NA	0.906	NA	3.2853
1323	14	102897958	102897958	C	T	intronic	TECPR2	NA	NA	NA	intronic	ENSG00000196663	NA	NA	NA	NA	NA	14q32.31	NA	NA	NA	NA	rs1190542	0.6	0.6	0.63	0.576478	0.7147	0.5099	0.4755	0.5719	0.5808	0.73	0.49	0.5	0.58	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.61188	NA	NA	NA	NA	NA	0.703	NA	3.2853
1323	19	57835297	57835297	G	T	intronic	ZNF543	NA	NA	NA	intronic	ENSG00000178229	NA	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs4801217	0.68	0.68	0.665	0.664537	0.7147	0.5149	0.7061	0.7837	0.5767	0.73	0.55	0.71	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.77532	NA	NA	NA	NA	NA	0.638	NA	3.2853
1324	6	32191620	32191620	C	T	intronic	NOTCH4	NA	NA	NA	intronic	ENSG00000204301	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs3134930	0.25	0.25	0.237	0.258187	0.2167	0.2748	0.2291	0.2829	0.271	0.22	0.3	0.19	0.27	0.2534	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.163028	NA	NA	0.245109	0.243878	NA	0.29	NA	3.284791
1324	10	15658596	15658596	G	A	intronic	ITGA8	NA	NA	NA	intronic	ENSG00000077943	NA	NA	NA	NA	NA	10p13	NA	NA	NA	NA	rs7099530	0.23	0.23	0.186	0.197085	0.2545	0.1806	0.3646	0.1445	0.1074	0.26	0.2	0.34	0.13	0.236	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.036744	NA	NA	0.224767	0.166591	NA	0.174	NA	3.284733
1324	8	2056569	2056569	C	T	intronic	MYOM2	NA	NA	NA	intronic	ENSG00000036448	NA	NA	NA	NA	NA	8p23.3	NA	NA	NA	NA	rs1978898	0.16	0.16	0.141	0.145367	0.2396	0.1587	0.1614	0.0166	0.1973	0.25	0.17	0.16	0.02	0.2236	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.482331	NA	NA	0.252442	0.047889	NA	0.072	NA	3.284358
1324	20	9543688	9543688	T	G	intronic	PAK7	NA	NA	NA	intronic	ENSG00000101349	NA	NA	NA	NA	NA	20p12.2	NA	NA	NA	NA	rs2297347	0.37	0.37	0.401	0.39357	0.2286	0.245	0.2219	0.8389	0.2362	0.23	0.23	0.24	0.83	0.2623	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.681033	NA	NA	0.224767	0.739219	NA	0.435	NA	3.284333
1324	11	18487425	18487425	A	G	intronic	LDHAL6A	NA	NA	NA	intronic	ENSG00000166800	NA	NA	NA	NA	NA	11p15.1	NA	NA	NA	NA	rs2658563	0.74	0.74	0.743	0.756589	0.7157	0.8681	0.745	0.6513	0.8344	0.72	0.88	0.72	0.65	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.473477	NA	NA	NA	NA	NA	0.812	NA	3.2843
1324	14	73732302	73732302	C	G	intronic	PAPLN	NA	NA	NA	intronic	ENSG00000100767	NA	NA	NA	NA	NA	14q24.2	NA	NA	NA	NA	rs177383	0.83	0.83	0.848	0.841853	0.7157	0.8452	0.8689	0.9871	0.7526	0.72	0.84	0.86	0.99	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.925783	NA	NA	NA	NA	NA	0.775	NA	3.2843
1324	15	90634941	90634941	A	G	intronic	IDH2	NA	NA	NA	intronic	ENSG00000182054	NA	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs10852126	0.66	0.66	0.68	0.650759	0.7157	0.3879	0.5634	0.8828	0.6033	0.74	0.39	0.6	0.87	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.662019	NA	NA	NA	NA	NA	0.761	NA	3.2843
1324	17	79077980	79077980	A	C	intronic	BAIAP2	NA	NA	NA	intronic	ENSG00000175866	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs57792378	0.79	0.79	0.781	0.806709	0.7157	0.8651	0.8458	0.7958	0.8272	0.71	0.85	0.83	0.8	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.065607	NA	NA	NA	NA	NA	0.783	NA	3.2843
1324	5	179016664	179016664	A	T	intronic	RUFY1	NA	NA	NA	intronic	ENSG00000176783	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs6895677	0.32	0.32	0.296	0.329473	0.1998	0.6448	0.3732	0.1172	0.3937	0.19	0.66	0.36	0.09	0.2947	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.251441	NA	NA	0.221395	0.138675	NA	0.239	NA	3.284105
1324	15	98514489	98514489	A	G	UTR3	ARRDC4	NM_183376:c.*72A>G	NA	NA	UTR3	ENSG00000140450	ENST00000538249:c.*72A>G,ENST00000268042:c.*72A>G	NA	NA	NA	NA	15q26.3	NA	NA	NA	NA	rs3803385	0.49	0.49	0.484	0.495807	0.5119	0.5486	0.5303	0.3026	0.6616	0.52	0.56	0.51	0.34	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.095625	2.095625	NA	0.537445	0.341837	NA	0.529	NA	3.2839884
1324	10	13099840	13099840	C	T	intergenic	CCDC3,OPTN	dist=56136;dist=42242	NA	NA	intronic	ENSG00000151468	NA	NA	NA	NA	NA	10p13	NA	NA	NA	NA	rs55749905	0.4	0.4	0.41	0.434505	0.3827	0.5238	0.4308	0.3986	0.4468	0.37	0.49	0.37	0.38	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.636525	NA	NA	NA	NA	NA	0.348	NA	3.2839667
1324	7	44555573	44555573	T	G	intronic	NPC1L1	NA	NA	NA	intronic	ENSG00000015520	NA	NA	NA	NA	NA	7p13	NA	NA	NA	NA	rs217428	0.18	0.18	0.163	0.170527	0.2376	0.005	0.1643	0.2837	0.1237	0.22	0.01	0.19	0.3	0.2227	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.43815	NA	NA	0.255814	0.288924	NA	0.174	NA	3.283886
1324	8	15095085	15095085	C	G	intronic	SGCZ	NA	NA	NA	intronic	ENSG00000185053	NA	NA	NA	NA	NA	8p22	NA	Name=ZNF263	NA	NA	rs4831331	0.49	0.49	0.462	0.483626	0.6093	0.2907	0.4366	0.6452	0.3681	0.6	0.27	0.44	0.59	0.5153	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.538928	NA	NA	0.591758	0.616682	NA	0.464	NA	3.283642
1324	14	74999108	74999108	C	T	intronic	LTBP2	NA	NA	NA	intronic	ENSG00000119681	NA	NA	NA	NA	NA	14q24.3	NA	NA	NA	NA	rs862025	0.35	0.35	0.337	0.360024	0.2217	0.3542	0.3646	0.5371	0.2658	0.25	0.4	0.29	0.5	0.2717	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.733525	NA	NA	0.223256	0.475942	NA	0.333	NA	3.283344
1324	8	48033959	48033959	A	C	intergenic	LINC00293,LOC100287846	dist=266552;dist=66971	NA	NA	ncRNA_exonic	ENSG00000248347	NA	NA	NA	NA	NA	8q11.1	NA	NA	NA	NA	rs11136110	0.69	0.69	0.649	0.649361	0.7167	0.8194	0.8372	0.4531	0.5368	0.71	0.8	0.83	0.45	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.150852	NA	NA	NA	NA	NA	0.638	NA	3.2833
1324	13	19700753	19700753	A	G	intergenic	LINC00442,RNU6-52P	dist=113979;dist=16369	NA	NA	ncRNA_exonic	ENSG00000224778	NA	NA	NA	NA	NA	13q12.11	NA	NA	NA	NA	rs7337122	0.62	0.62	0.588	0.602037	0.7167	0.4573	0.6729	0.5825	0.6094	0.72	0.47	0.69	0.61	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.946306	NA	NA	NA	NA	NA	0.616	NA	3.2833
1324	13	19700783	19700783	A	G	intergenic	LINC00442,RNU6-52P	dist=114009;dist=16339	NA	NA	ncRNA_intronic	ENSG00000224778	NA	NA	NA	NA	NA	13q12.11	NA	NA	NA	NA	rs7337141	0.62	0.62	0.603	0.603035	0.7167	0.4573	0.6729	0.5825	0.6145	0.72	0.47	0.69	0.61	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.984188	NA	NA	NA	NA	NA	0.609	NA	3.2833
1324	13	19700978	19700978	A	G	intergenic	LINC00442,RNU6-52P	dist=114204;dist=16144	NA	NA	ncRNA_intronic	ENSG00000224778	NA	NA	NA	NA	NA	13q12.11	NA	NA	NA	NA	rs9511728	0.62	0.62	0.598	0.601438	0.7167	0.4573	0.6729	0.5802	0.6094	0.72	0.47	0.69	0.6	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.167584	NA	NA	NA	NA	NA	0.601	NA	3.2833
1324	13	19701297	19701297	T	G	intergenic	LINC00442,RNU6-52P	dist=114523;dist=15825	NA	NA	ncRNA_intronic	ENSG00000224778	NA	NA	NA	NA	NA	13q12.11	NA	NA	NA	NA	rs9507489	0.62	0.62	0.603	0.602037	0.7167	0.4573	0.6729	0.5825	0.6094	0.72	0.47	0.69	0.61	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.776614	NA	NA	NA	NA	NA	0.616	NA	3.2833
1324	15	34060740	34060740	C	T	intronic	RYR3	NA	NA	NA	intronic	ENSG00000198838	NA	NA	NA	NA	NA	15q14	NA	NA	NA	NA	rs2278317	0.72	0.72	0.69	0.684105	0.7167	0.7758	0.804	0.5234	0.6881	0.73	0.8	0.8	0.55	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.304782	1.304782	NA	NA	NA	NA	0.616	NA	3.2833
1324	19	21588165	21588165	G	A	intronic	ZNF493	NA	NA	NA	intronic	ENSG00000196268,ENSG00000269237	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs2650847	0.72	0.72	0.725	0.709465	0.7167	0.6577	0.6585	0.7579	0.726	0.7	0.7	0.7	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.702371	NA	NA	NA	NA	NA	0.63	NA	3.2833
1324	19	47137972	47137972	G	A	upstream	GNG8	NA	NA	NA	upstream	ENSG00000167414	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs12460911	0.09	0.09	0.084	0.101637	0.1352	NA	0.0764	0.1218	0.1626	0.13	NA	0.09	0.15	0.129	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.840493	NA	NA	0.119879	0.117393	NA	0.087	NA	3.2825876
1324	1	76333163	76333163	T	G	intronic	MSH4	NA	NA	NA	intronic	ENSG00000057468	NA	NA	NA	NA	NA	1p31.1	NA	NA	NA	NA	rs5745433	0.17	0.17	0.16	0.165535	0.2604	0.0169	0.2161	0.1536	0.2014	0.24	0.01	0.25	0.18	0.2031	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.332312	NA	NA	0.254133	0.172876	NA	0.232	NA	3.282367
1324	19	43922300	43922300	G	A	intronic	TEX101	NA	NA	NA	intronic	ENSG00000131126	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs2278834	0.28	0.28	0.258	0.288139	0.2346	0.6091	0.2824	0.034	0.3599	0.23	0.56	0.25	0.03	0.2567	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.895988	NA	NA	0.226395	0.061734	NA	0.196	NA	3.282305
1324	2	44569474	44569474	G	A	intronic	PREPL	NA	NA	NA	intronic	ENSG00000138078	NA	NA	NA	NA	NA	2p21	NA	NA	NA	NA	rs2304769	0.64	0.64	0.662	0.664337	0.7177	0.3353	0.647	0.7814	0.8027	0.71	0.36	0.67	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.475632	NA	NA	NA	NA	NA	0.725	NA	3.2823
1324	3	23996371	23996371	T	G	intronic	NR1D2	NA	NA	NA	intronic	ENSG00000174738	NA	NA	NA	NA	NA	3p24.2	NA	NA	NA	NA	rs4858095	0.69	0.69	0.659	0.720248	0.7177	0.5298	0.8242	0.7277	0.8354	0.71	0.55	0.8	0.75	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.498842	NA	NA	NA	NA	NA	0.681	NA	3.2823
1324	3	172321159	172321159	C	T	intergenic	TNFSF10,NCEH1	dist=79862;dist=27276	NA	NA	downstream	ENSG00000224426	NA	NA	NA	NA	NA	3q26.31	NA	NA	NA	NA	rs6779133	0.16	0.16	0.143	0.140176	0.2177	0.1528	0.1888	0.0325	0.1585	0.21	0.16	0.23	0.03	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.965851	NA	NA	NA	NA	NA	0.21	NA	3.2823
1324	9	13987876	13987876	C	G	intergenic	LINC00583,NFIB	dist=42270;dist=93966	NA	NA	ncRNA_exonic	ENSG00000229268	NA	NA	NA	NA	NA	9p23	NA	NA	NA	NA	rs7875700	0.59	0.59	0.589	0.605232	0.7177	0.2976	0.6427	0.6884	0.6677	0.71	0.3	0.67	0.7	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.404273	NA	NA	NA	NA	NA	0.616	NA	3.2823
1324	11	397732	397732	T	G	intronic	PKP3	NA	NA	NA	intronic	ENSG00000184363	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs9795299	0.85	0.85	0.84	0.896965	0.7177	0.998	0.7579	0.9803	0.9632	0.71	1	0.74	0.97	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.045913	NA	NA	NA	NA	NA	0.761	NA	3.2823
1324	19	8999675	8999675	A	C	intronic	MUC16	NA	NA	NA	intronic	ENSG00000181143	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs11085766	0.63	0.63	0.565	0.598442	0.7177	0.6062	0.7219	0.3812	0.6738	0.68	0.67	0.71	0.42	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.215011	NA	NA	NA	NA	NA	0.551	NA	3.2823
1324	19	9000326	9000326	G	C	intronic	MUC16	NA	NA	NA	intronic	ENSG00000181143	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs35743385	0.63	0.63	0.586	0.598642	0.7177	0.6062	0.7219	0.3812	0.6748	0.7	0.67	0.71	0.43	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.378907	NA	NA	NA	NA	NA	0.551	NA	3.2823
1324	19	9003749	9003749	G	T	intronic	MUC16	NA	NA	NA	intronic	ENSG00000181143	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs11085779	0.63	0.63	0.607	0.602236	0.7177	0.6071	0.7248	0.3941	0.6728	0.7	0.67	0.72	0.44	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.848856	NA	NA	NA	NA	NA	0.551	NA	3.2823
1324	19	327998	327998	G	T	intronic	MIER2	NA	NA	NA	intronic	ENSG00000105556	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs2305113	0.34	0.34	0.319	0.400759	0.2008	0.6558	0.2839	0.3351	0.5153	0.19	0.6	0.26	0.3	0.2946	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.214309	NA	NA	0.222442	0.334317	NA	0.304	NA	3.282158
1324	5	168179922	168179922	T	C	intronic	SLIT3	NA	NA	NA	intronic	ENSG00000184347	NA	NA	NA	NA	NA	5q34	NA	NA	NA	NA	rs10039601	0.28	0.28	0.275	0.294329	0.2435	0.2302	0.1931	0.4644	0.2546	0.24	0.27	0.2	0.43	0.2523	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00729	NA	NA	0.222093	0.427145	NA	0.29	NA	3.282107
1324	17	76187160	76187160	C	T	intronic	AFMID	NA	NA	NA	intronic	ENSG00000183077	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs17640750	0.16	0.16	0.149	0.145966	0.2455	0.0446	0.2205	0.0703	0.1973	0.26	0.04	0.25	0.08	0.2262	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.213037	NA	NA	0.246512	0.101226	NA	0.152	NA	3.281788
1324	4	189064952	189064952	C	G	intronic	TRIML1	NA	NA	NA	intronic	ENSG00000184108	NA	NA	NA	NA	NA	4q35.2	NA	Name=NRSF	NA	NA	rs28463290	0.44	0.44	0.403	0.453874	0.5616	0.3591	0.5461	0.27	0.6237	0.55	0.37	0.55	0.27	0.5622	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.643711	NA	NA	0.594651	0.312755	ID=COSN167391;OCCURENCE=1(large_intestine)	0.486	NA	3.281549
1324	12	96106943	96106943	T	C	intronic	NTN4	NA	NA	NA	intronic	ENSG00000074527	NA	NA	NA	NA	NA	12q22	NA	NA	NA	NA	rs4129599	0.4	0.4	0.407	0.384984	0.2425	0.5367	0.2017	0.618	0.1902	0.24	0.55	0.23	0.58	0.2569	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.335342	NA	NA	0.21907	0.537449	NA	0.399	NA	3.28153
1324	7	98645517	98645517	G	A	intronic	SMURF1	NA	NA	NA	ncRNA_exonic	ENSG00000242687	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs219824	0.46	0.46	0.486	0.498203	0.335	0.4157	0.304	0.7814	0.5061	0.35	0.39	0.34	0.78	0.3842	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.563944	1.563944	NA	0.332791	0.725828	ID=COSN168153;OCCURENCE=1(large_intestine)	0.529	NA	3.2813423
1324	7	37933983	37933983	C	G	intronic	NME8	NA	NA	NA	intronic	ENSG00000086288,ENSG00000086289	NA	NA	NA	NA	NA	7p14.1	NA	NA	NA	NA	rs10260487	0.65	0.65	0.64	0.616414	0.7187	0.6776	0.5432	0.5219	0.6278	0.71	0.71	0.6	0.53	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.308616	NA	NA	NA	NA	NA	0.739	NA	3.2813
1324	16	19505751	19505751	G	A	intronic	TMC5	NA	NA	NA	intronic	ENSG00000103534	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs2856608	0.55	0.55	0.514	0.567891	0.7187	0.4623	0.5288	0.407	0.7669	0.74	0.43	0.55	0.39	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.493308	NA	NA	NA	NA	NA	0.377	NA	3.2813
1324	19	14865704	14865704	C	T	intronic	EMR2	NA	NA	NA	intronic	ENSG00000127507	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs2058107	0.75	0.75	0.756	0.784744	0.7187	0.8214	0.6455	0.8253	0.8589	0.73	0.78	0.64	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.879398	NA	NA	NA	NA	NA	0.703	NA	3.2813
1324	19	14866974	14866974	T	C	intronic	EMR2	NA	NA	NA	intronic	ENSG00000127507	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs2253472	0.76	0.76	0.77	0.807508	0.7187	0.8333	0.6571	0.8926	0.864	0.73	0.78	0.65	0.88	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.293064	NA	NA	NA	NA	NA	0.739	NA	3.2813
1324	19	57953121	57953121	C	T	intronic	ZNF749	NA	NA	NA	intronic	ENSG00000186230,ENSG00000268163	NA	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs4801483	0.76	0.76	0.795	0.758786	0.7187	0.7242	0.745	0.8775	0.6851	0.74	0.74	0.72	0.85	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.536861	NA	NA	NA	NA	NA	0.775	NA	3.2813
1324	13	52511606	52511606	G	A	intronic	ATP7B	NA	NA	NA	intronic	ENSG00000123191	NA	NA	NA	NA	NA	13q14.3	NA	NA	NA	NA	rs2282057	0.49	0.49	0.498	0.501797	0.5954	0.4018	0.4755	0.4955	0.5358	0.58	0.39	0.51	0.45	0.5374	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.05811	NA	NA	0.586337	0.475604	NA	0.442	CLINSIG=non-pathogenic|non-pathogenic;CLNDBN=Wilson's_disease|not_specified;CLNREVSTAT=single|single;CLNACC=RCV000029376.1|RCV000078054.1;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet:SNOMED_CT|.;CLNDSDBID=NBK1512:C0019202:277900:ORPHA905:88518009|.	3.280863
1324	13	113819009	113819009	T	A	intronic	PROZ	NA	NA	NA	intronic	ENSG00000126231	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs494860	0.22	0.22	0.193	0.263179	0.2256	0.3313	0.2507	0.0605	0.5143	0.23	0.32	0.23	0.05	0.2653	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.038637	NA	NA	0.228299	0.080118	NA	0.196	NA	3.280801
1324	8	113301548	113301548	A	G	intronic	CSMD3	NA	NA	NA	intronic	ENSG00000164796	NA	NA	NA	NA	NA	8q23.3	NA	NA	NA	NA	rs1861755	0.25	0.25	0.215	0.237819	0.2455	0.3462	0.3127	0.0537	0.3139	0.24	0.38	0.32	0.06	0.2483	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.08586	NA	NA	0.225401	0.077167	NA	0.268	NA	3.280799
1324	19	2041032	2041032	T	C	intronic	MKNK2	NA	NA	NA	intronic	ENSG00000099875	NA	NA	NA	Score=559;Name=lod=250	NA	19p13.3	NA	NA	NA	NA	rs2287003	0.68	0.68	0.698	0.717652	0.5577	0.6806	0.6657	0.9342	0.6646	0.53	0.69	0.69	0.92	0.6062	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.528944	NA	NA	0.555349	0.861099	NA	0.63	NA	3.280751
1324	17	30791503	30791503	C	T	intronic	PSMD11	NA	NA	NA	intronic	ENSG00000108671	NA	NA	NA	NA	NA	17q11.2	NA	NA	Name=6	NA	rs2302276	0.54	0.54	0.475	0.554113	0.6322	0.1062	0.5562	0.8797	0.4939	0.65	0.09	0.57	0.86	0.558	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.638303	NA	NA	0.52907	0.797322	ID=COSN165387;OCCURENCE=1(NS)	0.63	NA	3.28073
1324	18	61558878	61558878	C	T	intronic	SERPINB2	NA	NA	NA	intronic	ENSG00000197632	NA	NA	NA	NA	NA	18q21.33	NA	NA	NA	NA	rs6093	0.31	0.31	0.307	0.327077	0.2296	0.499	0.3516	0.2859	0.2883	0.22	0.46	0.32	0.28	0.2725	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.015381	NA	NA	0.217326	0.275306	NA	0.232	NA	3.280574
1324	19	53619465	53619465	C	T	intronic	ZNF415	NA	NA	NA	UTR3	ENSG00000170954	ENST00000600574:c.*9G>A	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs3745181	0.45	0.45	0.393	0.442492	0.4254	0.626	0.5937	0.2057	0.4836	0.44	0.62	0.57	0.2	0.4607	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.833781	NA	NA	NA	NA	NA	0.406	NA	3.2805667
1324	2	37297329	37297329	C	G	intronic	HEATR5B	NA	NA	NA	intronic	ENSG00000008869	NA	NA	NA	NA	NA	2p22.2	NA	NA	NA	NA	rs4327218	0.22	0.22	0.178	0.239217	0.2306	0.245	0.3631	0.0915	0.3538	0.24	0.23	0.35	0.08	0.2599	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.127127	NA	NA	0.228953	0.111666	NA	0.326	NA	3.280547
1324	16	19508573	19508573	A	G	intronic	TMC5	NA	NA	NA	intronic	ENSG00000103534	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs2187659	0.55	0.55	0.52	0.565495	0.7197	0.4613	0.5288	0.3979	0.7669	0.74	0.43	0.55	0.38	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.422572	NA	NA	NA	NA	NA	0.37	NA	3.2803
1324	16	19508583	19508583	C	G	intronic	TMC5	NA	NA	NA	intronic	ENSG00000103534	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs2187660	0.55	0.55	0.508	0.565695	0.7197	0.4623	0.5288	0.3979	0.7669	0.74	0.43	0.55	0.38	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.284172	NA	NA	NA	NA	NA	0.37	NA	3.2803
1324	12	69141678	69141678	T	A	intronic	SLC35E3	NA	NA	NA	intronic	ENSG00000175782	NA	NA	NA	NA	NA	12q15	NA	NA	NA	NA	rs57821268	0.19	0.19	0.2	0.231629	0.2247	0.2867	0.1383	0.0522	0.4908	0.22	0.31	0.14	0.07	0.2588	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.580232	4.580232	NA	0.236616	0.075055	NA	0.232	NA	3.279884
1324	3	125466801	125466801	T	C	intergenic	OSBPL11,MIR548I1	dist=152420;dist=42446	NA	NA	ncRNA_exonic	ENSG00000179170	NA	NA	NA	NA	NA	3q21.2	NA	NA	NA	NA	rs9833444	0.7	0.7	0.658	0.720248	0.7207	0.8304	0.6772	0.6014	0.7975	0.73	0.84	0.65	0.55	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.41824	NA	NA	NA	NA	NA	0.051	NA	3.2793
1324	7	138419085	138419085	A	G	intronic	ATP6V0A4	NA	NA	NA	intronic	ENSG00000105929	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs1037692	0.8	0.8	0.799	0.790335	0.7207	0.9454	0.8055	0.7784	0.7076	0.73	0.95	0.76	0.77	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.161652	NA	NA	NA	NA	NA	0.783	NA	3.2793
1324	9	19619509	19619509	C	T	intronic	SLC24A2	NA	NA	NA	intronic	ENSG00000155886	NA	NA	NA	NA	NA	9p22.1	NA	NA	NA	NA	rs1885220	0.77	0.77	0.766	0.761182	0.7207	0.8562	0.8055	0.6967	0.7607	0.73	0.88	0.78	0.7	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.333194	NA	NA	NA	NA	NA	0.717	NA	3.2793
1324	10	3147508	3147508	C	T	intronic	PFKP	NA	NA	NA	intronic	ENSG00000067057	NA	NA	NA	NA	NA	10p15.2	NA	NA	NA	NA	rs4881082	NA	NA	0.6	0.584864	0.7207	0.4722	0.6383	0.5053	0.6309	NA	NA	NA	NA	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.43904	NA	NA	NA	NA	NA	0.71	NA	3.2793
1324	19	39334811	39334811	T	A	intronic	HNRNPL	NA	NA	NA	intronic	ENSG00000104824	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs2278011	0.55	0.55	0.547	0.573882	0.7207	0.377	0.549	0.4826	0.7669	0.72	0.41	0.55	0.43	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.223319	NA	NA	NA	NA	NA	0.71	NA	3.2793
1324	14	21387994	21387994	A	G	ncRNA_exonic	ECRP	NA	NA	NA	ncRNA_exonic	ENSG00000136315	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs10459477	0.58	0.58	0.529	0.556909	0.7058	0.5099	0.7882	0.2602	0.6892	0.7	0.56	0.76	0.28	0.6816	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.6012	NA	0.87	NA	NA	NA	0.58	NA	3.2792666
1324	22	50719976	50719976	C	T	intronic	PLXNB2	NA	NA	NA	intronic	ENSG00000196576	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs111925803	0.14	0.14	0.126	0.107029	0.2614	0.0595	0.1527	0.0121	0.093	0.26	0.07	0.17	0.02	0.2022	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.993785	NA	NA	0.257239	0.053202	NA	0.109	NA	3.279161
1324	16	24902434	24902434	T	C	intronic	SLC5A11	NA	NA	NA	intronic	ENSG00000158865	NA	NA	NA	NA	NA	16p12.1	NA	NA	NA	NA	rs274082	0.22	0.22	0.204	0.240615	0.2247	0.3383	0.2507	0.0628	0.3896	0.23	0.32	0.24	0.07	0.2551	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.379586	NA	NA	0.241163	0.081475	NA	0.203	NA	3.279037
1324	14	21388302	21388302	G	A	ncRNA_exonic	ECRP	NA	NA	NA	ncRNA_exonic	ENSG00000136315	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs3748341	0.58	0.58	0.518	0.564097	0.7058	0.5119	0.7839	0.2897	0.6871	0.7	0.56	0.76	0.28	0.682	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.9225	NA	NA	NA	NA	NA	0.58	NA	3.2788666
1324	12	42717811	42717811	A	T	intronic	ZCRB1	NA	NA	NA	intronic	ENSG00000134283,ENSG00000139168	NA	NA	NA	NA	NA	12q12	NA	NA	NA	NA	rs17091074	0.34	0.34	0.349	0.353435	0.2316	0.3065	0.3271	0.5492	0.2812	0.21	0.32	0.31	0.56	0.2646	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.815716	NA	NA	0.225465	0.49773	NA	0.399	NA	3.278335
1324	11	78381678	78381678	C	T	intronic	TENM4	NA	NA	NA	intronic	ENSG00000149256	NA	NA	NA	NA	NA	11q14.1	NA	NA	NA	NA	rs7938204	0.55	0.55	0.568	0.53155	0.7217	0.1954	0.5461	0.7156	0.4233	0.73	0.19	0.58	0.7	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.284951	NA	NA	NA	NA	NA	0.58	NA	3.2783
1324	14	23868285	23868285	G	A	intronic	MYH6	NA	NA	NA	intronic	ENSG00000197616	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs439735	0.17	0.17	0.167	0.16873	0.2485	0.0734	0.1614	0.1778	0.1779	0.24	0.06	0.2	0.19	0.2136	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.141034	NA	NA	0.259651	0.188606	NA	0.196	NA	3.278249
1324	7	36492045	36492045	G	A	intronic	ANLN	NA	NA	NA	intronic	ENSG00000011426	NA	NA	NA	NA	NA	7p14.2	NA	NA	NA	NA	rs3801302	0.28	0.28	0.251	0.272364	0.2256	0.4077	0.2493	0.1868	0.3129	0.25	0.43	0.23	0.18	0.2569	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.378527	NA	NA	0.239302	0.201997	NA	0.254	NA	3.278198
1324	7	1482134	1482134	C	G	intronic	MICALL2	NA	NA	NA	intronic	ENSG00000164877	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs4457225	0.26	0.26	0.247	0.250599	0.2416	0.0446	0.3703	0.4448	0.1247	0.23	0.07	0.36	0.43	0.2509	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.102521	NA	NA	0.229419	0.422152	NA	0.413	NA	3.278081
1324	5	79355192	79355192	T	A	intronic	THBS4	NA	NA	NA	ncRNA_intronic	ENSG00000249825	NA	NA	NA	NA	NA	5q14.1	NA	NA	NA	NA	rs2434302	0.55	0.55	0.541	0.570288	0.5457	0.5198	0.5447	0.6551	0.5511	0.53	0.51	0.56	0.64	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.863318	NA	NA	0.509742	0.628613	ID=COSN167508;OCCURENCE=1(large_intestine)	0.507	NA	3.2778913
1324	7	37890081	37890081	G	A	intronic	NME8	NA	NA	NA	intronic	ENSG00000086288,ENSG00000086289	NA	NA	NA	NA	NA	7p14.1	NA	NA	NA	NA	rs2722371	0.27	0.27	0.27	0.245407	0.2485	0.1815	0.2161	0.4092	0.1074	0.24	0.21	0.22	0.45	0.2306	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.94272	NA	NA	0.243256	0.368815	NA	0.297	NA	3.277644
1324	19	45797593	45797593	T	C	intronic	MARK4	NA	NA	NA	intronic	ENSG00000007047	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs34313092	0.16	0.16	0.143	0.130391	0.2535	0.0903	0.1326	0.0598	0.1391	0.27	0.09	0.18	0.05	0.2004	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.536651	NA	NA	0.268488	0.097367	NA	0.094	NA	3.277612
1324	1	95333068	95333068	G	T	intronic	SLC44A3	NA	NA	NA	intronic	ENSG00000143036	NA	NA	NA	NA	NA	1p21.3	NA	NA	NA	NA	rs859096	0.65	0.65	0.616	0.613019	0.7227	0.75	0.6441	0.3396	0.7065	0.71	0.78	0.69	0.36	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.208105	NA	NA	NA	NA	NA	0.681	NA	3.2773
1324	7	137773291	137773291	T	G	intronic	AKR1D1	NA	NA	NA	intronic	ENSG00000122787	NA	NA	NA	NA	NA	7q33	NA	NA	NA	NA	rs2120846	0.72	0.72	0.717	0.755791	0.7227	0.6548	0.6484	0.9077	0.7648	0.72	0.59	0.66	0.9	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.773138	2.773138	NA	NA	NA	NA	0.841	NA	3.2773
1324	15	43244699	43244699	A	G	intronic	UBR1	NA	NA	NA	intronic	ENSG00000159459	NA	NA	NA	NA	NA	15q15.2	NA	NA	NA	NA	rs2277532	0.55	0.55	0.493	0.510383	0.7227	0.6161	0.7176	0.1044	0.5849	0.71	0.6	0.68	0.14	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.03833	NA	NA	NA	NA	NA	0.428	NA	3.2773
1324	16	28844365	28844365	G	A	intronic	ATXN2L	NA	NA	NA	ncRNA_intronic	ENSG00000260570	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs62036657	0.27	0.27	0.249	0.261382	0.329	0.126	0.487	0.2277	0.2168	0.34	0.13	0.41	0.21	0.3462	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.869659	NA	NA	0.381047	0.269458	ID=COSN165167;OCCURENCE=1(ovary),1(breast),1(lung)	0.159	NA	3.2770863
1324	6	117718303	117718303	A	G	intronic	ROS1	NA	NA	NA	intronic	ENSG00000047936	NA	NA	NA	NA	NA	6q22.1	NA	NA	NA	NA	rs9401003	0.33	0.33	0.323	0.351238	0.2465	0.2708	0.2954	0.5794	0.273	0.25	0.23	0.32	0.58	0.2532	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.272828	NA	NA	0.223256	0.482751	NA	0.457	NA	3.277044
1324	13	32832149	32832149	T	C	intronic	FRY	NA	NA	NA	intronic	ENSG00000073910	NA	NA	NA	Score=329;Name=lod=29	NA	13q13.1	NA	NA	NA	NA	rs2520686	0.48	0.48	0.46	0.458666	0.5944	0.4792	0.549	0.2073	0.5736	0.59	0.49	0.57	0.23	0.5343	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.438874	2.438874	NA	0.594472	0.290525	NA	0.435	NA	3.276828
1324	7	44089904	44089904	A	G	intronic	DBNL	NA	NA	NA	intronic	ENSG00000136279	NA	NA	NA	NA	NA	7p13	NA	NA	NA	NA	rs3812251	0.25	0.25	0.228	0.255192	0.2406	0.1141	0.2839	0.4017	0.1973	0.25	0.12	0.29	0.37	0.2544	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.622016	NA	0	0.228256	0.389015	NA	0.225	NA	3.276744
1324	1	11288618	11288618	G	A	intronic	MTOR	NA	NA	NA	intronic	ENSG00000198793	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs4845985	0.66	0.66	0.62	0.638179	0.7237	0.877	0.7622	0.2239	0.7761	0.73	0.88	0.75	0.23	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.601418	NA	NA	NA	NA	NA	0.652	NA	3.2763
1324	1	11288633	11288633	G	C	intronic	MTOR	NA	NA	NA	intronic	ENSG00000198793	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs4845986	0.66	0.66	0.614	0.638179	0.7237	0.877	0.7622	0.2239	0.7761	0.73	0.88	0.75	0.23	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.046552	NA	NA	NA	NA	NA	0.652	NA	3.2763
1324	1	11293200	11293200	C	T	intronic	MTOR	NA	NA	NA	intronic	ENSG00000198793	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs7541998	0.7	0.7	0.641	0.694688	0.7237	0.9187	0.8112	0.3124	0.8681	0.73	0.91	0.8	0.32	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.51561	NA	NA	NA	NA	NA	0.688	NA	3.2763
1324	2	170129636	170129636	A	G	intronic	LRP2	NA	NA	NA	intronic	ENSG00000081479	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	rs830995	0.73	0.73	0.741	0.674321	0.7237	0.8919	0.5461	0.6422	0.5337	0.72	0.88	0.6	0.64	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.346376	NA	NA	NA	NA	NA	0.681	NA	3.2763
1324	5	172573767	172573767	T	C	intronic	BNIP1	NA	NA	NA	intronic	ENSG00000113734	NA	NA	NA	NA	NA	5q35.1	NA	NA	NA	NA	rs29798	0.58	0.58	0.604	0.583067	0.7237	0.2897	0.5159	0.7269	0.5941	0.73	0.26	0.59	0.72	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.224128	NA	NA	NA	NA	NA	0.587	NA	3.2763
1324	16	78083742	78083742	C	T	intergenic	CLEC3A,WWOX	dist=17741;dist=49585	NA	NA	ncRNA_exonic	ENSG00000260731	NA	NA	NA	NA	NA	16q23.1	NA	NA	NA	NA	rs4888735	0.59	0.59	0.554	0.57488	0.7237	0.631	0.6398	0.2549	0.7505	0.74	0.62	0.66	0.27	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.173701	NA	NA	NA	NA	NA	0.529	NA	3.2763
1324	16	78083784	78083784	T	C	intergenic	CLEC3A,WWOX	dist=17783;dist=49543	NA	NA	ncRNA_exonic	ENSG00000260731	NA	NA	NA	NA	NA	16q23.1	NA	NA	NA	NA	rs4888736	0.59	0.59	0.533	0.57488	0.7237	0.631	0.6398	0.2549	0.7505	0.74	0.62	0.66	0.27	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.50891	NA	NA	NA	NA	NA	0.529	NA	3.2763
1324	3	190362220	190362220	A	T	intronic	IL1RAP	NA	NA	NA	intronic	ENSG00000196083	NA	NA	NA	NA	NA	3q28	NA	NA	NA	NA	rs34590034	0.28	0.28	0.309	0.289936	0.2495	0.0804	0.1599	0.5764	0.2526	0.26	0.09	0.18	0.62	0.242	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.485184	1.485184	NA	0.232558	0.490014	NA	0.333	NA	3.275942
1324	12	11174753	11174753	G	A	exonic	TAS2R19	NA	synonymous SNV	TAS2R19:NM_176888:exon1:c.C418T:p.L140L	exonic	ENSG00000212124	NA	synonymous SNV	ENSG00000212124:ENST00000390673:exon1:c.C418T:p.L140L	NA	NA	12p13.2	NA	NA	NA	NA	rs1868769	0.75	0.75	0.717	0.700879	0.8141	0.8611	0.8026	0.4062	0.7454	0.84	0.9	0.79	0.42	0.7805	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.474022	NA	NA	0.796163	0.45892	NA	0.71	NA	3.2759036
1324	12	10600282	10600282	C	T	intronic	KLRC1	NA	NA	NA	intronic	ENSG00000134545	NA	NA	NA	NA	NA	12p13.2	NA	NA	NA	NA	rs11053804	0.36	0.36	0.365	0.421126	0.2177	0.3353	0.3199	0.7012	0.4121	0.22	0.3	0.34	0.68	0.3015	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.161814	NA	NA	0.205321	0.539289	NA	0.333	NA	3.275479
1324	1	165376229	165376229	C	G	intronic	RXRG	NA	NA	NA	intronic	ENSG00000143171	NA	NA	NA	NA	NA	1q23.3	NA	NA	NA	NA	rs10800095	NA	NA	NA	0.779353	0.7247	0.8423	0.7666	0.7466	0.8241	NA	NA	NA	NA	NA	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-3.066125	NA	NA	NA	NA	NA	0.087	NA	3.2753
1324	2	79313815	79313815	G	T	intronic	REG1B	NA	NA	NA	intronic	ENSG00000172023	NA	NA	NA	NA	NA	2p12	NA	NA	NA	NA	rs2073445	0.67	0.67	0.654	0.666534	0.7247	0.6974	0.781	0.6067	0.5746	0.72	0.66	0.73	0.57	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.916857	NA	NA	NA	NA	NA	0.696	NA	3.2753
1324	2	198281743	198281743	T	C	intronic	SF3B1	NA	NA	NA	intronic	ENSG00000115524	NA	NA	NA	NA	NA	2q33.1	NA	NA	NA	NA	rs699318	0.71	0.71	0.754	0.715056	0.7247	0.5179	0.6297	0.8729	0.7556	0.73	0.59	0.64	0.86	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.161267	NA	NA	NA	NA	NA	0.725	NA	3.2753
1324	19	1073073	1073073	A	G	intronic	HMHA1	NA	NA	NA	intronic	ENSG00000180448	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs2072102	0.75	0.75	0.734	0.741214	0.7247	0.6409	0.8343	0.8275	0.6789	0.73	0.69	0.8	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.39059	NA	NA	NA	NA	NA	0.746	NA	3.2753
1324	12	101584210	101584210	T	C	intronic	SLC5A8	NA	NA	NA	intronic	ENSG00000256870	NA	NA	NA	NA	NA	12q23.1	NA	NA	NA	NA	rs1069475	0.33	0.33	0.342	0.321286	0.2485	0.5427	0.1412	0.3729	0.226	0.23	0.52	0.16	0.37	0.2517	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.741498	1.741498	NA	0.224651	0.320699	NA	0.283	NA	3.275149
1325	17	72945334	72945334	T	C	intronic	OTOP3	NA	NA	NA	intronic	ENSG00000182938	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs8068514	0.25	0.25	0.235	0.240016	0.2445	0.2599	0.1916	0.2398	0.2495	0.24	0.25	0.21	0.3	0.2369	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.678041	NA	NA	0.243721	0.238992	NA	0.159	NA	3.274879
1325	10	32806972	32806972	C	T	intronic	CCDC7	NA	NA	NA	intronic	ENSG00000216937	NA	NA	NA	NA	NA	10p11.22	NA	NA	NA	NA	rs2990984	0.43	0.43	0.391	0.487819	0.3718	0.5863	0.5461	0.4062	0.5746	0.35	0.54	0.49	0.36	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.172587	NA	NA	0.353443	0.360549	NA	0.464	NA	3.274757
1325	6	29682059	29682059	G	A	intergenic	ZFP57,HLA-F	dist=37128;dist=9058	NA	NA	intergenic	ENSG00000233916,ENSG00000204642	dist=5735;dist=8493	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs17184695	0.06	0.06	0.044	0.0756789	0.0586	0.1577	0.0375	0.0008	0.137	0.06	0.14	0.03	0.002	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.725427	NA	NA	NA	NA	NA	0.087	NA	3.2747334
1325	6	29682103	29682103	A	G	intergenic	ZFP57,HLA-F	dist=37172;dist=9014	NA	NA	intergenic	ENSG00000233916,ENSG00000204642	dist=5779;dist=8449	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs17184702	0.06	0.06	0.043	0.0756789	0.0586	0.1577	0.0375	0.0008	0.137	0.06	0.14	0.03	0.002	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.871334	NA	NA	NA	NA	NA	0.087	NA	3.2747334
1325	2	171319997	171319997	A	C	intronic	MYO3B	NA	NA	NA	intronic	ENSG00000071909	NA	NA	NA	NA	NA	2q31.1	NA	Name=ELF1_(SC-631)	NA	NA	rs12477518	0.38	0.38	0.354	0.355032	0.6143	0.1567	0.4308	0.2103	0.4346	0.61	0.18	0.47	0.19	0.5162	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.808463	NA	NA	0.594935	0.270188	NA	0.413	NA	3.274565
1325	7	155094172	155094172	C	T	intronic	INSIG1	NA	NA	NA	intronic	ENSG00000186480	NA	NA	NA	NA	NA	7q36.2	NA	NA	NA	NA	rs9718441	0.17	0.17	0.134	0.162141	0.2316	0.002	0.3761	0.1377	0.137	0.24	0.0017	0.35	0.15	0.2301	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.133464	NA	NA	0.263837	0.174308	NA	0.362	NA	3.274463
1325	2	152303171	152303171	G	A	intronic	RIF1	NA	NA	NA	intronic	ENSG00000080345	NA	NA	NA	NA	NA	2q23.3	NA	NA	NA	NA	rs2432941	0.72	0.72	0.72	0.657348	0.7256	0.756	0.7363	0.5802	0.5337	0.71	0.79	0.75	0.63	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.574065	NA	NA	NA	NA	NA	0.775	NA	3.2744
1325	4	70288596	70288596	G	A	intergenic	UGT2B28,UGT2B4	dist=127828;dist=57287	NA	NA	ncRNA_intronic	ENSG00000249956	NA	NA	NA	NA	NA	4q13.2	NA	NA	NA	NA	rs2736508	0.69	0.69	0.621	0.715655	0.7256	0.6032	0.7205	0.7436	0.7802	0.72	0.59	0.7	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.96536	NA	NA	NA	NA	NA	0.58	NA	3.2744
1325	6	29864871	29864871	T	C	intergenic	HLA-H,HCG4B	dist=6015;dist=27498	NA	NA	ncRNA_exonic	ENSG00000231130	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs9259455	0.63	0.63	0.622	0.677716	0.7256	0.5754	0.7464	0.7027	0.6513	0.69	0.51	0.64	0.67	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.019909	NA	NA	NA	NA	NA	0.58	NA	3.2744
1325	11	89405190	89405190	A	G	intronic	FOLH1B	NA	NA	NA	ncRNA_intronic	ENSG00000134612	NA	NA	NA	NA	NA	11q14.3	NA	NA	NA	NA	rs10047486	0.24	0.24	0.216	0.216454	0.3718	0.1319	0.2435	0.1293	0.2423	0.36	0.13	0.27	0.15	0.3074	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.304063	NA	NA	0.379739	0.190822	NA	0.319	NA	3.2743943
1325	6	2836266	2836266	T	A	intronic	SERPINB1	NA	NA	NA	intronic	ENSG00000021355	NA	NA	NA	NA	NA	6p25.2	NA	Name=Pol2	NA	NA	rs385955	0.57	0.57	0.523	0.54992	0.5825	0.5685	0.6614	0.4501	0.5532	0.59	0.61	0.66	0.45	0.5685	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.88105	NA	NA	0.575233	0.429868	NA	0.457	NA	3.273767
1325	6	29785827	29785827	A	C	intergenic	LOC554223,HLA-G	dist=20243;dist=8929	NA	NA	intergenic	ENSG00000237042,ENSG00000204632	dist=5354;dist=8917	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs17185419	0.06	0.06	NA	0.0890575	0.0596	0.1964	0.0375	0.0053	0.1585	0.06	0.14	0.03	0.0041	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.525097	NA	NA	NA	NA	NA	NA	NA	3.2737334
1325	6	29785828	29785828	G	A	intergenic	LOC554223,HLA-G	dist=20244;dist=8928	NA	NA	intergenic	ENSG00000237042,ENSG00000204632	dist=5355;dist=8916	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs17185426	0.06	0.06	NA	0.0878594	0.0596	0.1964	0.0375	0.0008	0.1585	0.06	0.14	0.03	0.002	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.786346	NA	NA	NA	NA	NA	NA	NA	3.2737334
1325	12	38423378	38423378	G	A	intergenic	NONE,ALG10B	dist=NONE;dist=287179	NA	NA	intergenic	ENSG00000258368,ENSG00000257173	dist=453192;dist=48953	NA	NA	NA	NA	12q12	NA	NA	NA	NA	rs118177186	0.03	0.03	0.027	0.024361	0.0596	0.0208	0.0317	0.0038	0.0143	0.06	0.01	0.02	0.01	NA	0.06	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.43568	NA	NA	NA	NA	NA	0.029	NA	3.2737334
1325	1	38301250	38301250	A	G	intronic	MTF1	NA	NA	NA	intronic	ENSG00000188786	NA	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	rs3912368	0.57	0.57	0.541	0.523962	0.7266	0.4792	0.6023	0.295	0.6155	0.74	0.52	0.6	0.33	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.995167	NA	NA	NA	NA	NA	0.543	NA	3.2734
1325	1	81892826	81892826	C	T	intergenic	NONE,LPHN2	dist=NONE;dist=373256	NA	NA	ncRNA_exonic	ENSG00000224494	NA	NA	NA	NA	NA	1p31.1	NA	NA	NA	NA	rs12121921	0.54	0.54	0.524	0.543331	0.7266	0.3502	0.6254	0.4622	0.6053	0.73	0.3	0.61	0.49	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.307494	NA	NA	NA	NA	NA	0.399	NA	3.2734
1325	5	155771773	155771773	A	G	intronic	SGCD	NA	NA	NA	intronic	ENSG00000170624	NA	NA	NA	NA	NA	5q33.3	NA	NA	NA	NA	rs4434364	0.83	0.83	0.844	0.845248	0.7266	0.9067	0.7349	0.9539	0.8354	0.72	0.92	0.74	0.95	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.989977	NA	NA	NA	NA	NA	0.891	NA	3.2734
1325	10	124747108	124747108	T	C	intronic	PSTK	NA	NA	NA	intronic	ENSG00000179988	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs2421154	0.59	0.59	0.612	0.581669	0.7266	0.3929	0.5591	0.6596	0.5378	0.73	0.38	0.59	0.64	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.486068	NA	NA	NA	NA	NA	0.601	NA	3.2734
1325	22	31658281	31658281	A	G	intronic	LIMK2	NA	NA	NA	intronic	ENSG00000182541	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs2073857	0.82	0.82	0.851	0.845048	0.7266	0.876	0.7478	0.9856	0.8139	0.71	0.87	0.76	0.98	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.691985	NA	NA	NA	NA	NA	0.833	NA	3.2734
1325	2	70015181	70015181	C	T	intronic	ANXA4	NA	NA	NA	intronic	ENSG00000196975	NA	NA	NA	NA	NA	2p13.3	NA	NA	NA	NA	rs10496171	0.25	0.25	0.244	0.28135	0.2435	0.3333	0.2378	0.2663	0.318	0.23	0.28	0.2	0.25	0.2556	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.342335	NA	NA	0.227674	0.246028	NA	0.268	NA	3.273226
1325	14	23882144	23882144	T	C	intronic	MYH7	NA	NA	NA	intronic	ENSG00000092054	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs2284651	0.37	0.37	0.393	0.384385	0.3569	0.1577	0.2723	0.7141	0.2802	0.34	0.15	0.32	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.124632	NA	NA	0.370522	0.681358	NA	0.493	NA	3.272578
1325	3	11831953	11831953	C	T	UTR3	TAMM41	NM_138807:c.*26G>A	NA	NA	UTR3	ENSG00000144559	ENST00000273037:c.*26G>A,ENST00000455809:c.*26G>A,ENST00000457498:c.*1824G>A	NA	NA	NA	NA	3p25.2	NA	NA	NA	NA	rs9267	0.27	0.27	0.21	0.236022	0.3668	0.1716	0.4741	0.0749	0.2168	0.37	0.19	0.47	0.09	0.3281	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.606629	NA	NA	0.36593	0.121425	NA	0.254	NA	3.2725034
1325	2	132182489	132182489	T	G	intergenic	LOC389043,LOC401010	dist=16688;dist=17245	NA	NA	upstream	ENSG00000214077	NA	NA	NA	NA	NA	2q21.1	NA	NA	NA	NA	rs1880995	0.35	0.35	0.268	0.365216	0.2276	0.754	0.5101	0.1346	0.3149	0.21	0.7	0.4	0.1	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.636223	NA	NA	NA	NA	NA	0.254	NA	3.2724
1325	17	67212574	67212574	A	C	intronic	ABCA10	NA	NA	NA	intronic	ENSG00000154263	NA	NA	NA	NA	NA	17q24.3	NA	NA	NA	NA	rs9912127	0.64	0.64	0.621	0.667332	0.7276	0.4583	0.7709	0.7126	0.6861	0.72	0.42	0.73	0.69	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.39646	NA	NA	NA	NA	NA	0.63	NA	3.2724
1325	6	26031868	26031868	G	A	UTR3	HIST1H3B	NM_003537:c.*10C>T	NA	NA	UTR3	ENSG00000124693	ENST00000244661:c.*10C>T	NA	NA	NA	NA	6p22.2	NA	Name=Pol2,NRSF,Pol2(phosphoS2),Sin3Ak-20,TAF7_(SQ-8),BCLAF1_(M33-P5B11),KAP1,Pol2-4H8,Pol2(b),USF2,ZBTB33,CEBPB,HEY1,NFKB	NA	NA	rs2213284	0.79	0.79	0.778	0.78115	0.67	0.8581	0.7219	0.9448	0.637	0.66	0.89	0.72	0.93	0.7036	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.1459	NA	NA	0.687442	0.903314	NA	0.732	NA	3.2722914
1325	19	38189616	38189616	T	C	exonic	ZNF607	NA	synonymous SNV	ZNF607:NM_001172677:exon5:c.A1413G:p.T471T,ZNF607:NM_032689:exon5:c.A1416G:p.T472T	exonic	ENSG00000198182	NA	synonymous SNV	ENSG00000198182:ENST00000355202:exon5:c.A1416G:p.T472T,ENSG00000198182:ENST00000395835:exon5:c.A1413G:p.T471T	NA	NA	19q13.12	NA	NA	NA	NA	rs2075284	0.64	0.64	0.63	0.634984	0.834	0.3482	0.7378	0.6498	0.6329	0.84	0.35	0.75	0.6	0.7423	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.751737	NA	NA	0.81814	0.692692	NA	0.732	NA	3.2722266
1325	17	38188419	38188419	C	T	intronic	MED24	NA	NA	NA	intronic	ENSG00000008838	NA	NA	NA	NA	NA	17q21.1	NA	NA	NA	NA	rs3935281	0.32	0.32	0.296	0.318291	0.3648	0.4246	0.4193	0.0673	0.4284	0.36	0.41	0.42	0.08	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.211267	NA	NA	0.362979	0.117052	NA	0.362	NA	3.272221
1325	4	154542814	154542814	G	T	intronic	KIAA0922	NA	NA	NA	intronic	ENSG00000121210	NA	NA	NA	NA	NA	4q31.3	NA	NA	Name=3	NA	rs7663417	0.53	0.53	NA	0.532548	0.5845	0.376	0.5865	0.5575	0.5685	0.6	0.42	0.56	0.53	0.5822	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.991455	NA	NA	0.561395	0.539946	NA	0.551	NA	3.271905
1325	7	134133291	134133291	G	A	intronic	AKR1B1	NA	NA	NA	intronic	ENSG00000085662	NA	NA	NA	NA	NA	7q33	NA	NA	NA	NA	rs2734653	0.3	0.3	0.241	0.267572	0.2406	0.6131	0.402	0.0113	0.1902	0.24	0.59	0.36	0.02	0.2586	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.494079	NA	NA	0.228953	0.052655	NA	0.109	NA	3.271847
1325	6	56462840	56462840	G	A	ncRNA_intronic	RNU6-71P	NA	NA	NA	intronic	ENSG00000151914	NA	NA	NA	NA	NA	6p12.1	NA	NA	NA	NA	rs9370541	0.32	0.32	0.314	0.310503	0.3569	0.246	0.3545	0.3253	0.2781	0.34	0.24	0.36	0.35	0.3358	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.24557	NA	NA	0.368891	0.322956	NA	0.37	NA	3.2717423
1325	18	21395358	21395358	G	C	intronic	LAMA3	NA	NA	NA	intronic	ENSG00000053747	NA	NA	NA	NA	NA	18q11.2	NA	NA	NA	NA	rs2155841	0.79	0.79	0.815	0.824481	0.7286	0.8065	0.8098	0.9849	0.7352	0.7	0.8	0.77	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.136867	NA	NA	NA	NA	NA	0.826	NA	3.2714
1325	9	134003900	134003900	A	G	intronic	NUP214	NA	NA	NA	intronic	ENSG00000126883	NA	NA	NA	NA	NA	9q34.13	NA	NA	NA	NA	rs967174	0.27	0.27	0.255	0.282548	0.2356	0.3889	0.1744	0.2511	0.3405	0.23	0.38	0.17	0.26	0.2519	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.608709	NA	NA	0.241279	0.241489	ID=COSN168685;OCCURENCE=1(large_intestine)	0.391	NA	3.271221
1325	7	36462205	36462205	G	A	intronic	ANLN	NA	NA	NA	intronic	ENSG00000011426	NA	NA	NA	NA	NA	7p14.2	NA	NA	NA	NA	rs2302526	0.28	0.28	0.27	0.272165	0.2256	0.4038	0.2507	0.1884	0.3129	0.25	0.43	0.23	0.18	0.263	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.293273	2.293273	NA	0.240461	0.203813	NA	0.261	NA	3.270939
1325	5	40964816	40964816	C	A	intronic	C7	NA	NA	NA	intronic	ENSG00000112936	NA	NA	NA	NA	NA	5p13.1	NA	NA	NA	NA	rs7713884	0.28	0.28	0.277	0.309505	0.2445	0.3661	0.1571	0.3449	0.3783	0.23	0.34	0.19	0.35	0.2552	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.563214	NA	NA	0.229508	0.330967	NA	0.254	NA	3.270792
1325	11	119146659	119146659	G	C	intronic	CBL	NA	NA	NA	intronic	ENSG00000110395	NA	NA	NA	NA	NA	11q23.3	NA	NA	Name=4	NA	rs2511854	0.7	0.7	0.723	0.731829	0.5795	0.8829	0.4452	0.8343	0.7975	0.57	0.87	0.49	0.85	0.6033	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.943653	NA	NA	0.546449	0.782628	NA	0.797	NA	3.270751
1325	4	3180021	3180021	T	C	intronic	HTT	NA	NA	NA	intronic	ENSG00000197386	NA	NA	NA	Score=704;Name=lod=970	NA	4p16.3	NA	NA	NA	NA	rs363096	0.54	0.54	0.522	0.533946	0.5915	0.375	0.5375	0.6831	0.4346	0.58	0.37	0.57	0.67	0.5563	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.078884	NA	NA	0.581503	0.683449	NA	0.645	NA	3.270697
1325	9	77745424	77745424	T	C	intronic	OSTF1	NA	NA	NA	intronic	ENSG00000134996	NA	NA	NA	NA	NA	9q21.13	NA	NA	NA	NA	rs2295861	0.73	0.73	0.73	0.730431	0.7296	0.6825	0.683	0.8638	0.6339	0.72	0.64	0.71	0.86	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.074031	NA	NA	NA	NA	NA	0.804	NA	3.2704
1325	10	129907741	129907741	G	A	intronic	MKI67	NA	NA	NA	intronic	ENSG00000148773	NA	NA	NA	NA	NA	10q26.2	NA	NA	NA	NA	rs2065718	0.72	0.72	0.725	0.722644	0.7296	0.7391	0.7003	0.6566	0.8037	0.72	0.74	0.75	0.7	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.518832	NA	NA	NA	NA	NA	0.717	NA	3.2704
1325	11	119497488	119497488	C	T	intergenic	LOC100499227,PVRL1	dist=127544;dist=11320	NA	NA	ncRNA_intronic	ENSG00000254561	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs7116091	0.73	0.73	0.728	0.741613	0.7296	0.8224	0.7305	0.6672	0.7791	0.72	0.84	0.73	0.63	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.883112	NA	NA	NA	NA	NA	0.652	NA	3.2704
1325	1	233362930	233362930	G	A	intronic	PCNXL2	NA	NA	NA	intronic	ENSG00000135749	NA	NA	NA	NA	NA	1q42.2	NA	NA	NA	NA	rs701176	0.35	0.35	0.32	0.339657	0.2336	0.5298	0.4769	0.27	0.2495	0.24	0.52	0.43	0.25	0.2863	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.188375	NA	NA	0.209803	0.235831	ID=COSN163475;OCCURENCE=1(breast)	0.29	NA	3.270297
1325	13	113893729	113893729	G	A	intronic	CUL4A	NA	NA	NA	intronic	ENSG00000139842	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs3794422	0.22	0.22	0.194	0.252396	0.2326	0.3383	0.3242	0.0136	0.456	0.24	0.32	0.3	0.02	0.2665	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.257581	NA	NA	0.230698	0.049478	NA	0.188	NA	3.270202
1325	8	39128387	39128387	C	T	intronic	ADAM32	NA	NA	NA	intronic	ENSG00000197140	NA	NA	NA	NA	NA	8p11.22	NA	NA	NA	NA	rs4733994	0.23	0.23	0.195	0.215056	0.2416	0.2917	0.2147	0.1278	0.227	0.25	0.27	0.23	0.14	0.2508	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.512533	NA	NA	0.237423	0.149147	NA	0.145	NA	3.270177
1325	13	46930536	46930536	C	A	intronic	KIAA0226L	NA	NA	NA	ncRNA_intronic	ENSG00000241353	NA	NA	NA	NA	NA	13q14.13	NA	NA	NA	NA	rs181977	0.48	0.48	0.457	0.461661	0.3479	0.5923	0.415	0.5658	0.3364	0.34	0.6	0.42	0.6	0.3864	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.484665	NA	NA	0.32907	0.516568	NA	0.457	NA	3.2699633
1325	17	11536049	11536049	G	A	intronic	DNAH9	NA	NA	NA	intronic	ENSG00000007174	NA	NA	NA	NA	NA	17p12	NA	NA	NA	NA	rs11655911	0.13	0.13	0.123	0.0894569	0.2803	0.002	0.1441	0.0151	0.045	0.27	0.0017	0.18	0.02	0.1877	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.155239	NA	NA	0.262209	0.053109	NA	0.043	NA	3.269791
1325	2	208811284	208811284	C	T	intronic	PLEKHM3	NA	NA	NA	intronic	ENSG00000178385	NA	NA	NA	NA	NA	2q33.3	NA	NA	NA	NA	rs10932216	0.19	0.19	0.178	0.15615	0.2485	0.2381	0.1729	0.0318	0.1329	0.25	0.24	0.17	0.04	0.2221	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.06625	NA	NA	0.25962	0.063163	NA	0.138	NA	3.26978
1325	6	29785958	29785958	C	G	intergenic	LOC554223,HLA-G	dist=20374;dist=8798	NA	NA	intergenic	ENSG00000237042,ENSG00000204632	dist=5485;dist=8786	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs17179038	0.07	0.07	0.044	0.0894569	0.0636	0.1974	0.0389	0.0015	0.1595	0.06	0.15	0.04	0.002	NA	0.15	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.094636	NA	NA	NA	NA	NA	0.094	NA	3.2697334
1325	6	29864852	29864852	C	T	intergenic	HLA-H,HCG4B	dist=5996;dist=27517	NA	NA	ncRNA_exonic	ENSG00000231130	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs9259452	0.63	0.63	0.611	0.679313	0.7306	0.5764	0.7478	0.7035	0.6513	0.7	0.51	0.64	0.67	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.077172	NA	NA	NA	NA	NA	0.601	NA	3.2694
1325	6	29864865	29864865	T	C	intergenic	HLA-H,HCG4B	dist=6009;dist=27504	NA	NA	ncRNA_exonic	ENSG00000231130	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs9259454	0.63	0.63	0.601	0.679313	0.7306	0.5764	0.7478	0.7035	0.6513	0.7	0.51	0.64	0.67	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.184322	NA	NA	NA	NA	NA	0.565	NA	3.2694
1325	13	19701025	19701025	G	C	intergenic	LINC00442,RNU6-52P	dist=114251;dist=16097	NA	NA	ncRNA_intronic	ENSG00000224778	NA	NA	NA	NA	NA	13q12.11	NA	NA	NA	NA	rs4531588	0.68	0.68	0.684	0.66254	0.7306	0.5546	0.6888	0.6959	0.6401	0.73	0.56	0.71	0.71	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.108751	NA	NA	NA	NA	NA	0.71	NA	3.2694
1325	13	52542796	52542796	T	G	intronic	ATP7B	NA	NA	NA	intronic	ENSG00000123191	NA	NA	NA	NA	NA	13q14.3	NA	NA	NA	NA	rs2147363	0.64	0.64	0.641	0.611821	0.7306	0.4841	0.6499	0.7035	0.4703	0.72	0.47	0.69	0.7	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.574556	NA	NA	NA	NA	NA	0.667	NA	3.2694
1325	16	114535	114535	A	G	intronic	RHBDF1	NA	NA	NA	intronic	ENSG00000007384	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs2562147	0.71	0.71	0.658	0.734225	0.7306	0.75	0.7738	0.6309	0.8333	0.73	0.72	0.81	0.59	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.234088	NA	NA	NA	NA	NA	0.783	NA	3.2694
1325	9	134004912	134004912	A	C	intronic	NUP214	NA	NA	NA	intronic	ENSG00000126883	NA	NA	NA	NA	NA	9q34.13	NA	NA	NA	NA	rs3736957	0.28	0.28	0.289	0.295128	0.2346	0.4206	0.1787	0.2723	0.3415	0.23	0.42	0.18	0.27	0.2544	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.228887	NA	NA	0.241744	0.254653	NA	0.391	NA	3.269256
1325	12	125457151	125457151	T	C	intronic	DHX37	NA	NA	NA	intronic	ENSG00000150990	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs12320413	0.18	0.18	0.172	0.189097	0.2604	0.0496	0.1412	0.2186	0.2536	0.26	0.05	0.15	0.23	0.2275	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.214116	NA	NA	0.242907	0.237177	NA	0.196	NA	3.269193
1325	21	44837551	44837551	G	A	exonic	SIK1	NA	synonymous SNV	SIK1:NM_173354:exon13:c.C1848T:p.P616P	exonic	ENSG00000142178	NA	synonymous SNV	ENSG00000142178:ENST00000270162:exon13:c.C1848T:p.P616P	NA	NA	21q22.3	NA	NA	NA	NA	rs430552	0.75	0.75	0.743	0.725439	0.7922	0.8849	0.8617	0.4803	0.727	0.78	0.88	0.85	0.48	0.8	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.086693	NA	NA	0.805393	0.564002	NA	0.609	NA	3.2690736
1325	2	170623622	170623622	G	C	intergenic	PHOSPHO2-KLHL23,SSB	dist=15226;dist=31700	NA	NA	intronic	ENSG00000213160	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	rs10803841	0.43	0.43	0.401	0.416334	0.3976	0.5268	0.4712	0.3275	0.4029	0.38	0.55	0.48	0.32	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.943455	NA	NA	NA	NA	NA	0.37	NA	3.2690667
1325	10	115327193	115327193	A	G	intronic	HABP2	NA	NA	NA	intronic	ENSG00000148702	NA	NA	NA	NA	NA	10q25.3	NA	NA	NA	NA	rs2286745	0.22	0.22	0.196	0.218051	0.337	0.0933	0.2046	0.2216	0.229	0.34	0.09	0.22	0.2	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.215726	NA	NA	0.394092	0.248555	NA	0.261	NA	3.268908
1325	4	37590570	37590570	G	A	intronic	C4orf19	NA	NA	NA	intronic	ENSG00000154274	NA	NA	NA	NA	NA	4p14	NA	NA	NA	NA	rs2279994	0.18	0.18	0.176	0.151358	0.2624	0.0754	0.1729	0.118	0.1452	0.26	0.1	0.18	0.14	0.2097	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.007639	NA	NA	0.25907	0.151158	NA	0.21	NA	3.26883
1325	1	16319862	16319862	G	C	intergenic	ZBTB17,C1orf64	dist=17235;dist=10869	NA	NA	ncRNA_exonic	ENSG00000224966	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs1999736	0.73	0.73	0.735	0.728435	0.7316	0.6855	0.7349	0.7935	0.6769	0.72	0.7	0.75	0.78	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.548902	NA	NA	NA	NA	NA	0.797	NA	3.2684
1325	1	42506381	42506381	T	C	intergenic	NONE,GUCA2B	dist=NONE;dist=112711	NA	NA	ncRNA_exonic	ENSG00000227538	NA	NA	NA	NA	NA	1p34.2	NA	NA	NA	NA	rs10890177	0.77	0.77	0.778	0.772963	0.7316	0.9702	0.6513	0.6558	0.8569	0.74	0.97	0.67	0.68	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.181315	NA	NA	NA	NA	NA	0.71	NA	3.2684
1325	4	68904834	68904834	T	G	intergenic	TMPRSS11GP,TMPRSS11F	dist=41677;dist=14082	NA	NA	ncRNA_exonic	ENSG00000227725	NA	NA	NA	NA	NA	4q13.2	NA	NA	NA	NA	rs9999589	0.67	0.67	0.609	0.64996	0.7316	0.8651	0.5648	0.4024	0.7393	0.74	0.87	0.62	0.36	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.103154	NA	NA	NA	NA	NA	0.659	NA	3.2684
1325	6	29864754	29864754	T	C	intergenic	HLA-H,HCG4B	dist=5898;dist=27615	NA	NA	ncRNA_intronic	ENSG00000231130	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs9259451	0.71	0.71	0.722	0.694688	0.7316	0.5903	0.7723	0.7292	0.6626	0.72	0.6	0.72	0.8	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.279409	NA	NA	NA	NA	NA	0.594	NA	3.2684
1325	8	125207690	125207690	T	C	intergenic	FER1L6,TMEM65	dist=75388;dist=115469	NA	NA	ncRNA_intronic	ENSG00000214803	NA	NA	NA	NA	NA	8q24.13	NA	NA	NA	NA	rs5027167	0.76	0.76	0.756	0.77476	0.7316	0.9484	0.7824	0.6067	0.862	0.72	0.95	0.73	0.63	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.06081	NA	NA	NA	NA	NA	0.688	NA	3.2684
1325	16	81962071	81962071	A	C	intronic	PLCG2	NA	NA	NA	intronic	ENSG00000197943	NA	NA	NA	NA	NA	16q23.3	NA	NA	NA	NA	rs4366702	0.73	0.73	0.708	0.688898	0.7316	0.8145	0.817	0.4932	0.6892	0.73	0.82	0.81	0.56	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.930886	2.930886	NA	NA	NA	NA	0.746	NA	3.2684
1325	22	31493460	31493460	T	C	intronic	SMTN	NA	NA	NA	intronic	ENSG00000183963	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs5753458	0.73	0.73	0.73	0.740216	0.7316	0.5813	0.6412	0.9607	0.6851	0.73	0.55	0.69	0.96	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.74726	NA	NA	NA	NA	NA	0.688	NA	3.2684
1325	1	6154417	6154417	C	T	intronic	KCNAB2	NA	NA	NA	intronic	ENSG00000069424	NA	NA	NA	NA	NA	1p36.31	NA	NA	NA	NA	rs2294932	0.25	0.25	0.219	0.23103	0.2515	0.3899	0.2233	0.1331	0.184	0.24	0.36	0.25	0.12	0.2509	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.650793	1.650793	NA	0.229201	0.147675	NA	0.297	NA	3.268399
1325	9	112199146	112199146	A	G	intronic	PTPN3	NA	NA	NA	intronic	ENSG00000070159	NA	NA	NA	NA	NA	9q31.3	NA	NA	NA	NA	rs4978809	0.2	0.2	0.186	0.186901	0.2425	0.0665	0.3501	0.1604	0.1738	0.24	0.06	0.33	0.19	0.2399	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.367004	NA	NA	0.249302	0.184975	NA	0.297	NA	3.268298
1325	18	51904498	51904498	G	A	intronic	C18orf54	NA	NA	NA	intronic	ENSG00000166845	NA	NA	NA	NA	NA	18q21.2	NA	NA	NA	NA	rs3753057	0.2	0.2	0.195	0.178115	0.2535	0.2877	0.219	0.0076	0.1892	0.24	0.27	0.23	0.01	0.2254	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.081883	NA	NA	0.252966	0.060173	NA	0.152	NA	3.268134
1325	13	113513682	113513682	C	G	intronic	ATP11A	NA	NA	NA	intronic	ENSG00000068650	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs10492684	0.16	0.16	0.113	0.154153	0.2744	0.0823	0.2954	0.0219	0.183	0.25	0.07	0.28	0.04	0.2126	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.595782	NA	NA	0.245581	0.048116	NA	0.123	NA	3.267419
1325	18	67365585	67365585	A	G	intronic	DOK6	NA	NA	NA	intronic	ENSG00000206052	NA	NA	NA	NA	NA	18q22.2	NA	NA	NA	NA	rs4581806	0.71	0.71	0.665	0.698283	0.7326	0.9464	0.7752	0.3911	0.7679	0.73	0.94	0.78	0.37	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.638079	NA	NA	NA	NA	NA	0.717	NA	3.2674
1325	20	44208011	44208011	C	T	upstream	WFDC8	NA	NA	NA	upstream	ENSG00000158901	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs7273669	0.22	0.22	0.219	0.220847	0.3996	0.003	0.2363	0.2345	0.2321	0.4	NA	0.25	0.2	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.369412	NA	NA	NA	NA	NA	0.348	NA	3.2670666
1325	12	27468313	27468313	A	G	intronic	STK38L	NA	NA	NA	intronic	ENSG00000211455	NA	NA	NA	NA	NA	12p11.23	NA	NA	NA	NA	rs2346053	0.33	0.33	0.355	0.357628	0.2237	0.2956	0.3098	0.5688	0.3078	0.23	0.31	0.27	0.56	0.2788	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.887726	NA	NA	0.230456	0.522923	NA	0.333	NA	3.267044
1325	19	50315773	50315773	T	A	intronic	FUZ	NA	NA	NA	UTR3	ENSG00000010361	ENST00000525800:c.*44A>T,ENST00000527111:c.*44A>T,ENST00000526435:c.*44A>T	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs2305918	0.34	0.34	0.325	0.366414	0.4592	0.2361	0.3098	0.3404	0.4806	0.45	0.22	0.35	0.31	0.4406	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.701799	NA	NA	NA	NA	NA	0.283	NA	3.2668667
1325	14	100166300	100166300	T	C	intronic	CYP46A1	NA	NA	NA	intronic	ENSG00000036530	NA	NA	NA	NA	NA	14q32.2	NA	NA	NA	NA	rs943881	0.26	0.26	0.253	0.274361	0.3748	0.2212	0.255	0.1619	0.3916	0.38	0.2	0.25	0.16	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.253898	NA	NA	0.358459	0.155931	NA	0.275	NA	3.266741
1325	7	152951256	152951256	T	C	intergenic	ACTR3B,DPP6	dist=398792;dist=633163	NA	NA	intergenic	ENSG00000224104,ENSG00000234722	dist=109583;dist=145749	NA	NA	NA	NA	7q36.2	NA	NA	NA	NA	rs36052781	0.1	0.1	0.089	0.103834	0.0666	0.0317	0.072	0.2519	0.0389	0.06	0.03	0.07	0.26	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.61505	NA	NA	NA	NA	NA	0.109	NA	3.2667334
1325	18	47017820	47017820	A	G	intronic	RPL17,RPL17-C18orf32	NA	NA	NA	ncRNA_intronic	ENSG00000265496	NA	NA	NA	NA	NA	18q21.1	NA	NA	NA	NA	rs1943676	0.38	0.38	0.32	0.366214	0.3628	0.4147	0.4539	0.2882	0.363	0.36	0.42	0.42	0.34	0.3663	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.041166	NA	NA	0.337719	0.285947	NA	0.37	NA	3.2665143
1325	5	137735754	137735754	A	T	intronic	KDM3B	NA	NA	NA	intronic	ENSG00000120733	NA	NA	NA	NA	NA	5q31.2	NA	NA	NA	NA	rs4835680	0.73	0.73	0.728	0.749201	0.7336	0.8502	0.7579	0.5756	0.8896	0.74	0.87	0.71	0.57	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.124569	NA	NA	NA	NA	NA	0.717	NA	3.2664
1325	7	2290372	2290372	C	T	intronic	NUDT1	NA	NA	NA	intronic	ENSG00000106268	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs10230822	0.68	0.68	0.69	0.676917	0.7336	0.6726	0.6628	0.671	0.6411	0.74	0.65	0.65	0.64	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.888291	NA	NA	NA	NA	NA	0.652	NA	3.2664
1325	17	39436909	39436909	C	T	intergenic	KRTAP9-7,KRTAP29-1	dist=4450;dist=21169	NA	NA	ncRNA_exonic	ENSG00000237183	NA	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs2320374	NA	NA	0.631	0.681709	0.7336	0.6319	0.8012	0.5265	0.8047	NA	NA	NA	NA	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.684832	NA	NA	NA	NA	NA	0.558	NA	3.2664
1325	18	21400028	21400028	G	T	intronic	LAMA3	NA	NA	NA	intronic	ENSG00000053747	NA	NA	NA	NA	NA	18q11.2	NA	NA	NA	NA	rs6507956	0.82	0.82	0.838	0.825679	0.7336	0.8065	0.8098	0.9864	0.7342	0.72	0.82	0.8	0.97	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.231803	NA	NA	NA	NA	NA	0.826	NA	3.2664
1325	4	76956179	76956179	G	A	intronic	ART3,CXCL11	NA	NA	NA	intronic	ENSG00000156219,ENSG00000169248	NA	NA	NA	NA	NA	4q21.1	NA	NA	NA	NA	rs12649185	0.25	0.25	0.226	0.214457	0.2435	0.3909	0.2954	0.0356	0.1871	0.23	0.42	0.31	0.04	0.2437	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.273308	NA	NA	0.246453	0.073082	NA	0.101	NA	3.266347
1325	22	23247025	23247025	G	A	intergenic	IGLL5,RTDR1	dist=9012;dist=154568	NA	NA	upstream	ENSG00000211678	NA	NA	NA	NA	NA	22q11.22	NA	NA	NA	NA	rs2009423	NA	NA	0.149	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2337	0.033	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.462737	NA	NA	NA	NA	NA	0.022	NA	3.2663
1325	7	142206473	142206473	G	A	intergenic	LOC730441,MTRNR2L6	dist=234405;dist=167658	NA	NA	downstream	ENSG00000229769	NA	NA	NA	NA	NA	7q34	NA	NA	Name=4	NA	rs11764626	0.26	0.26	0.239	0.219449	0.4165	0.1994	0.3184	0.0802	0.1554	0.43	0.14	0.33	0.1	0.3671	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.711812	NA	NA	0.450522	0.13439	NA	0.225	NA	3.265878
1325	15	76114358	76114358	A	C	intergenic	MIR4313,UBE2Q2	dist=59702;dist=21264	NA	NA	intergenic	ENSG00000252372,ENSG00000140367	dist=4854;dist=21264	NA	NA	NA	NA	15q24.2	NA	NA	NA	NA	rs17341589	0.05	0.05	0.038	0.0371406	0.0676	NA	0.0432	0.0499	0.0225	0.07	NA	0.04	0.06	NA	0.07	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.250169	1.250169	NA	NA	NA	NA	0.065	NA	3.2657334
1325	17	56621359	56621359	T	C	exonic	C17orf47	NA	synonymous SNV	C17orf47:NM_001038704:exon1:c.A189G:p.S63S	exonic	ENSG00000181013	NA	synonymous SNV	ENSG00000181013:ENST00000321691:exon1:c.A189G:p.S63S	NA	NA	17q22	NA	NA	NA	NA	rs6503867	0.89	0.89	0.899	0.910343	0.7714	0.999	0.8718	0.9652	0.9151	0.79	1	0.84	0.96	0.845	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.049848	NA	NA	0.784651	0.943259	NA	0.775	NA	3.2656156
1325	11	49194894	49194894	G	A	intronic	FOLH1	NA	NA	NA	intronic	ENSG00000086205	NA	NA	NA	NA	NA	11p11.12	NA	NA	NA	NA	rs175849	0.35	0.35	0.325	0.396965	0.2256	0.3165	0.2911	0.6452	0.3957	0.23	0.34	0.27	0.61	0.2845	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.382472	NA	NA	0.224343	0.553158	NA	0.312	NA	3.265557
1325	3	8988809	8988809	C	T	intronic	RAD18	NA	NA	NA	intronic	ENSG00000070950	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs689296	0.5	0.5	0.481	0.493011	0.7346	0.3581	0.6455	0.1452	0.7454	0.73	0.4	0.61	0.16	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.247004	1.247004	NA	NA	NA	NA	0.551	NA	3.2654
1325	7	142157895	142157895	G	C	intergenic	LOC730441,MTRNR2L6	dist=185827;dist=216236	NA	NA	upstream	ENSG00000227550	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs2734204	0.24	0.24	0.2	0.223243	0.2346	0.1567	0.3775	0.2095	0.1892	0.23	0.15	0.35	0.25	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.123287	3.123287	NA	NA	NA	NA	0.239	NA	3.2654
1325	9	117390300	117390300	C	A	intronic	C9orf91	NA	NA	NA	intronic	ENSG00000157693	NA	NA	NA	NA	NA	9q32	NA	NA	NA	NA	rs7031094	0.66	0.66	0.66	0.614018	0.7346	0.6706	0.6499	0.5386	0.5082	0.73	0.66	0.65	0.58	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.17109	NA	NA	NA	NA	NA	0.746	NA	3.2654
1325	20	24950373	24950373	A	C	intronic	APMAP	NA	NA	NA	intronic	ENSG00000101474	NA	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	rs2064404	0.82	0.82	0.789	0.801717	0.7346	0.996	0.8285	0.6959	0.7945	0.73	0.99	0.83	0.74	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.169177	NA	NA	NA	NA	NA	0.833	NA	3.2654
1325	1	110171705	110171705	A	C	intronic	AMPD2	NA	NA	NA	ncRNA_intronic	ENSG00000228703	NA	NA	NA	NA	NA	1p13.3	NA	NA	Name=7	NA	rs523786	0.8	0.8	0.804	0.830272	0.6779	0.9802	0.7795	0.8132	0.8916	0.67	0.99	0.76	0.83	0.7428	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.010955	NA	NA	0.647558	0.813436	NA	0.804	NA	3.2650753
1325	3	121400725	121400725	G	A	intronic	GOLGB1	NA	NA	NA	intronic	ENSG00000173230	NA	NA	NA	NA	NA	3q13.33	NA	NA	NA	NA	rs1463736	0.28	0.28	0.258	0.25	0.2505	0.4841	0.1614	0.1649	0.1861	0.25	0.47	0.2	0.16	0.239	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.240835	2.240835	NA	0.245465	0.159782	NA	0.188	NA	3.265035
1326	4	858866	858866	G	A	intronic	GAK	NA	NA	NA	intronic	ENSG00000178950	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs1026739	0.24	0.24	0.245	0.270966	0.2157	0.3671	0.2752	0.2126	0.3047	0.2	0.33	0.25	0.21	0.3016	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.070771	NA	NA	0.218023	0.226509	NA	0.232	NA	3.264677
1326	9	98229389	98229389	C	G	ncRNA_exonic	LOC100507346	NA	NA	NA	intronic	ENSG00000185920	NA	NA	NA	NA	NA	9q22.32	NA	NA	NA	NA	rs2066829	0.4	0.4	0.412	0.390575	0.3459	0.3383	0.2305	0.6793	0.2137	0.36	0.34	0.22	0.66	0.3583	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.076656	NA	NA	0.364535	0.628461	NA	0.348	NA	3.2645983
1326	17	7852528	7852528	C	T	intronic	CNTROB	NA	NA	NA	UTR3	ENSG00000170037	ENST00000571632:c.*2513C>T	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs7211792	0.58	0.58	0.553	0.630391	0.4493	0.8016	0.67	0.5408	0.7331	0.46	0.74	0.61	0.56	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.690108	1.690108	NA	0.45286	0.557081	NA	0.558	NA	3.2645067
1326	2	89472419	89472419	T	C	intergenic	MIR4436A,NONE	dist=360451;dist=NONE	NA	NA	upstream	ENSG00000253625	NA	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs7424726	0.38	0.38	0.377	0.450479	0.2356	0.5	0.4986	0.6467	0.3211	0.19	0.5	0.4	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.631409	NA	NA	NA	NA	NA	0.138	NA	3.2644
1326	16	28915527	28915527	G	A	UTR3	ATP2A1	NM_004320:c.*64G>A,NM_173201:c.*1G>A	NA	NA	UTR3	ENSG00000196296	ENST00000357084:c.*1G>A,ENST00000395503:c.*64G>A,ENST00000536376:c.*64G>A	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs10499	0.8	0.8	0.84	0.81869	0.6998	0.8839	0.5432	0.9909	0.8364	0.69	0.87	0.64	0.99	0.706	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.469351	NA	NA	0.66314	0.924215	NA	0.891	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000082694.1;CLNDSDB=.;CLNDSDBID=.	3.2643934
1326	2	242607924	242607924	A	G	intronic	ATG4B	NA	NA	NA	intronic	ENSG00000168397	NA	NA	NA	NA	NA	2q37.3	NA	NA	NA	NA	rs62190301	0.22	0.22	0.169	0.205072	0.2336	0.2937	0.2089	0.0809	0.2495	0.25	0.3	0.21	0.1	0.2947	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.813302	NA	NA	0.207373	0.097	NA	0.232	NA	3.264327
1326	11	124179656	124179656	G	T	downstream	OR8D1	NA	NA	NA	downstream	ENSG00000196341	NA	NA	NA	NA	NA	11q24.2	NA	NA	NA	NA	rs4936917	0.32	0.32	0.287	0.266174	0.4026	0.4187	0.3357	0.0877	0.1605	0.39	0.42	0.36	0.07	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.507327	NA	NA	NA	NA	NA	0.181	NA	3.2640666
1326	4	114421712	114421712	C	T	intronic	CAMK2D	NA	NA	NA	intronic	ENSG00000145349	NA	NA	NA	NA	NA	4q26	NA	NA	NA	NA	rs17446453	0.15	0.15	0.15	0.128594	0.2783	0.0883	0.1585	0.0234	0.137	0.28	0.08	0.19	0.02	0.2047	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.565704	NA	NA	0.253023	0.0604	NA	0.13	NA	3.263977
1326	6	33625696	33625696	T	C	intronic	ITPR3	NA	NA	NA	intronic	ENSG00000096433	NA	NA	NA	NA	NA	6p21.31	NA	NA	NA	NA	rs2274200	0.22	0.22	0.18	0.203674	0.2435	0.2599	0.2882	0.0295	0.2802	0.25	0.29	0.31	0.03	0.2627	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.2158	2.2158	NA	0.229884	0.064231	NA	0.239	NA	3.263916
1326	2	89472415	89472415	A	G	intergenic	MIR4436A,NONE	dist=360447;dist=NONE	NA	NA	upstream	ENSG00000253625	NA	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs7426367	0.37	0.37	0.403	0.427117	0.2366	0.4692	0.3602	0.6505	0.3252	0.19	0.47	0.3	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.680853	NA	NA	NA	NA	NA	0.246	NA	3.2634
1326	3	194313832	194313832	T	C	intronic	TMEM44	NA	NA	NA	intronic	ENSG00000145014	NA	NA	NA	NA	NA	3q29	NA	Name=PU.1	Name=20	NA	rs1773184	0.95	0.95	0.954	0.949081	0.9105	0.9702	0.951	0.9554	0.9571	0.91	0.97	0.96	0.97	0.9235	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.259097	NA	NA	0.903023	0.949387	NA	0.942	NA	3.262977
1326	4	90168882	90168882	G	A	UTR3	GPRIN3	NM_198281:c.*49C>T	NA	NA	UTR3	ENSG00000185477	ENST00000333209:c.*49C>T	NA	NA	NA	NA	4q22.1	NA	NA	NA	NA	rs13115988	0.45	0.45	0.435	0.501198	0.338	0.6081	0.5288	0.4342	0.6299	0.33	0.6	0.49	0.42	0.4074	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.87663	NA	NA	0.325349	0.406037	NA	0.449	NA	3.2625844
1326	1	43357600	43357600	T	C	intergenic	ZNF691,SLC2A1	dist=39454;dist=33446	NA	NA	ncRNA_exonic	ENSG00000237090	NA	NA	NA	NA	NA	1p34.2	NA	NA	NA	NA	rs1681855	0.72	0.72	0.695	0.688299	0.7376	0.6448	0.7867	0.6846	0.6176	0.75	0.69	0.76	0.68	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.511098	NA	NA	NA	NA	NA	0.746	NA	3.2624
1326	6	29895816	29895816	A	T	intergenic	HCG4B,HLA-A	dist=2388;dist=14431	NA	NA	ncRNA_intronic	ENSG00000230795	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs2517760	0.74	0.74	0.656	0.795927	0.7376	0.9028	0.804	0.7095	0.8569	0.72	0.85	0.71	0.68	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.020352	NA	NA	NA	NA	NA	0.71	NA	3.2624
1326	7	33059407	33059407	A	G	intronic	NT5C3A	NA	NA	NA	intronic	ENSG00000105778,ENSG00000122643	NA	NA	NA	NA	NA	7p14.3	NA	NA	NA	NA	rs2392209	0.76	0.76	0.765	0.76897	0.7376	0.6121	0.7651	0.9357	0.7403	0.74	0.64	0.75	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.779653	NA	NA	NA	NA	NA	0.833	NA	3.2624
1326	11	26702482	26702482	T	A	intronic	SLC5A12	NA	NA	NA	intronic	ENSG00000148942	NA	NA	NA	NA	NA	11p14.2	NA	NA	NA	NA	rs10767569	0.56	0.56	0.565	0.52496	0.7376	0.5913	0.513	0.2201	0.6585	0.74	0.6	0.54	0.27	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.266502	NA	NA	NA	NA	NA	0.5	NA	3.2624
1326	11	117034729	117034729	T	C	intronic	PAFAH1B2	NA	NA	NA	intronic	ENSG00000168092	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs10790175	0.53	0.53	0.5	0.470447	0.7376	0.373	0.621	0.3071	0.41	0.74	0.37	0.66	0.31	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.195546	NA	NA	NA	NA	NA	0.558	NA	3.2624
1326	14	94776401	94776401	T	C	intronic	SERPINA6	NA	NA	NA	intronic	ENSG00000170099	NA	NA	NA	NA	NA	14q32.13	NA	NA	NA	NA	rs11160168	0.79	0.79	0.794	0.782548	0.7376	0.9921	0.8329	0.652	0.7536	0.73	0.99	0.82	0.65	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.336792	NA	NA	NA	NA	NA	0.768	NA	3.2624
1326	19	9301955	9301955	G	C	intergenic	OR7D2,OR7D4	dist=2462;dist=22571	NA	NA	upstream	ENSG00000267775	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs68119574	0.2	0.2	0.19	0.198482	0.2376	0.2391	0.1527	0.0953	0.2883	0.23	0.26	0.17	0.09	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.202269	NA	NA	NA	NA	NA	0.181	NA	3.2624
1326	13	26436425	26436425	A	G	intronic	ATP8A2	NA	NA	NA	intronic	ENSG00000132932	NA	NA	NA	NA	NA	13q12.13	NA	NA	NA	NA	rs34674796	0.2	0.2	0.18	0.194089	0.2565	0.2014	0.2378	0.09	0.2321	0.25	0.21	0.23	0.07	0.2283	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.616412	NA	NA	0.25282	0.104534	NA	0.152	NA	3.26238
1326	5	78587135	78587135	A	T	intronic	JMY	NA	NA	NA	intronic	ENSG00000152409	NA	NA	NA	NA	NA	5q14.1	NA	NA	NA	NA	rs17234734	0.13	0.13	0.116	0.115815	0.2744	0.002	0.1527	0.0151	0.18	0.27	0.0017	0.16	0.03	0.2022	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.53503	1.53503	NA	0.26123	0.04951	NA	0.109	NA	3.26217
1326	10	124034528	124034528	G	T	intronic	BTBD16	NA	NA	NA	intronic	ENSG00000138152	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs7096744	0.49	0.49	0.507	0.479233	0.3748	0.622	0.4712	0.5439	0.3579	0.38	0.64	0.47	0.49	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.795486	NA	NA	0.363294	0.551301	NA	0.391	NA	3.261906
1326	13	113889499	113889499	A	G	intronic	CUL4A	NA	NA	NA	intronic	ENSG00000139842	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs2287251	0.24	0.24	0.215	0.272165	0.2336	0.3393	0.3285	0.0832	0.4581	0.24	0.32	0.31	0.09	0.2734	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.915116	NA	NA	0.231163	0.111893	NA	0.217	NA	3.261837
1326	11	45891418	45891418	G	A	intronic	CRY2	NA	NA	NA	intronic	ENSG00000121671	NA	NA	NA	NA	NA	11p11.2	NA	NA	NA	NA	rs7123390	0.17	0.17	0.159	0.164936	0.2545	0.125	0.1412	0.1263	0.183	0.24	0.12	0.15	0.13	0.2252	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.309788	NA	NA	0.258539	0.136469	NA	0.217	NA	3.261761
1326	9	130634944	130634944	T	C	intronic	AK1	NA	NA	NA	ncRNA_intronic	ENSG00000257524	NA	NA	NA	NA	NA	9q34.11	NA	NA	NA	NA	rs743537	0.32	0.32	0.333	0.364417	0.3539	0.1399	0.2565	0.5106	0.4857	0.34	0.16	0.3	0.51	0.3559	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.449402	NA	NA	0.362209	0.503631	NA	0.384	NA	3.2613243
1326	7	39243978	39243978	A	G	intronic	POU6F2	NA	NA	NA	intronic	ENSG00000106536	NA	NA	NA	NA	NA	7p14.1	NA	NA	NA	NA	rs35489214	0.35	0.35	0.303	0.36262	0.3648	0.1468	0.4539	0.3933	0.4765	0.36	0.19	0.41	0.46	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.630381	1.630381	NA	0.374293	0.377168	NA	0.312	NA	3.260907
1326	16	21147885	21147885	T	C	intronic	DNAH3	NA	NA	NA	intronic	ENSG00000158486	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs3743698	0.27	0.27	0.25	0.2498	0.2336	0.2946	0.3646	0.1853	0.226	0.26	0.31	0.31	0.2	0.2617	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.174326	NA	NA	0.24407	0.20786	ID=COSN165132;OCCURENCE=1(breast)	0.326	NA	3.26063
1326	2	239235857	239235857	A	G	intronic	TRAF3IP1	NA	NA	NA	intronic	ENSG00000204104	NA	NA	NA	NA	NA	2q37.3	NA	NA	NA	NA	rs6728430	0.68	0.68	0.659	0.659145	0.7396	0.4851	0.7277	0.7065	0.6431	0.75	0.5	0.76	0.73	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.035889	NA	NA	NA	NA	NA	0.638	NA	3.2604
1326	7	76990126	76990126	C	T	intronic	GSAP	NA	NA	NA	intronic	ENSG00000186088	NA	NA	NA	NA	NA	7q11.23	NA	NA	NA	NA	rs4727365	0.28	0.28	0.285	0.300519	0.2316	0.0873	0.2147	0.5439	0.3231	0.24	0.09	0.25	0.58	0.2595	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.491934	NA	NA	0.248721	0.492737	NA	0.275	NA	3.260179
1326	19	15763798	15763798	G	C	intronic	CYP4F3	NA	NA	NA	intronic	ENSG00000186529	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs2683039	0.2	0.2	0.188	0.195887	0.2694	0.1558	0.1671	0.1067	0.3027	0.27	0.18	0.2	0.12	0.223	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.008476	NA	NA	0.247558	0.152519	NA	0.203	NA	3.260042
1326	8	87544832	87544832	A	G	intronic	CPNE3	NA	NA	NA	intronic	ENSG00000085719	NA	NA	NA	NA	NA	8q21.3	NA	NA	NA	NA	rs72690457	0.17	0.17	0.159	0.149361	0.2535	0.0496	0.1268	0.1596	0.1472	0.27	0.06	0.16	0.17	0.2166	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.705927	NA	NA	0.270081	0.205402	NA	0.145	NA	3.259819
1326	16	53396356	53396356	T	C	intergenic	CHD9,LOC643802	dist=34942;dist=6918	NA	NA	ncRNA_exonic	ENSG00000259962	NA	NA	NA	NA	NA	16q12.2	NA	NA	NA	NA	rs2908778	0.74	0.74	0.709	0.738818	0.7406	0.9196	0.7118	0.5953	0.7638	0.74	0.91	0.7	0.57	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.044474	NA	NA	NA	NA	NA	0.688	NA	3.2594
1326	13	19725673	19725673	C	G	intergenic	RNU6-52P,TUBA3C	dist=8456;dist=22237	NA	NA	downstream	ENSG00000234894	NA	NA	NA	NA	NA	13q12.11	NA	NA	NA	NA	rs7984192	0.24	0.24	0.195	0.248602	0.2406	0.3839	0.2651	0.087	0.3241	0.24	0.38	0.24	0.08	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.750023	NA	NA	NA	NA	NA	0.196	NA	3.2594
1326	16	15156971	15156971	A	G	intronic	RRN3	NA	NA	NA	intronic	ENSG00000085721,ENSG00000179889	NA	NA	NA	NA	NA	16p13.11	NA	NA	NA	NA	rs2941259	0.61	0.61	0.572	0.591853	0.7406	0.498	0.7882	0.3744	0.6902	0.74	0.54	0.8	0.37	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.46285	NA	NA	NA	NA	NA	0.667	NA	3.2594
1326	9	105763912	105763912	T	C	intronic	CYLC2	NA	NA	NA	intronic	ENSG00000155833	NA	NA	NA	NA	NA	9q31.1	NA	NA	NA	NA	rs10820335	0.17	0.17	0.16	0.15595	0.2435	0.1032	0.2478	0.0809	0.1564	0.24	0.13	0.23	0.09	0.2395	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.241935	1.241935	NA	0.257993	0.097267	NA	0.246	NA	3.259007
1326	1	169580717	169580717	T	C	intronic	SELP	NA	NA	NA	intronic	ENSG00000174175	NA	NA	NA	NA	NA	1q24.2	NA	NA	NA	NA	rs3917731	0.13	0.13	0.125	0.107827	0.2565	0.001	0.1427	0.0492	0.1196	0.26	0.0017	0.15	0.06	0.2028	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.849129	NA	NA	0.28186	0.0867	NA	0.123	NA	3.25884
1326	21	40191431	40191431	T	G	exonic	ETS2	NA	synonymous SNV	ETS2:NM_005239:exon8:c.T816G:p.T272T,ETS2:NM_001256295:exon9:c.T1236G:p.T412T	exonic	ENSG00000157557	NA	synonymous SNV	ENSG00000157557:ENST00000360938:exon8:c.T816G:p.T272T,ENSG00000157557:ENST00000360214:exon9:c.T816G:p.T272T	NA	NA	21q22.2	NA	NA	NA	NA	rs457705	0.64	0.64	0.628	0.58107	0.838	0.4563	0.5778	0.5628	0.4724	0.84	0.43	0.63	0.57	0.722	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.123797	NA	NA	0.847907	0.621652	ID=COSM1483938,COSM444459;OCCURENCE=1(breast)	0.638	NA	3.2587596
1326	11	43905484	43905484	T	G	intronic	ALKBH3	NA	NA	NA	intronic	ENSG00000166199	NA	NA	NA	NA	NA	11p11.2	NA	NA	NA	NA	rs2271817	0.24	0.24	0.208	0.261382	0.2266	0.2381	0.415	0.0998	0.4305	0.24	0.27	0.4	0.1	0.2822	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.043048	NA	NA	0.232442	0.13754	NA	0.261	NA	3.258758
1326	6	144806691	144806691	C	T	intronic	UTRN	NA	NA	NA	intronic	ENSG00000152818	NA	NA	NA	NA	NA	6q24.2	NA	NA	NA	NA	rs9496982	0.32	0.32	0.364	0.362819	0.2316	0.1429	0.219	0.7254	0.3364	0.22	0.15	0.24	0.73	0.2753	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.466711	NA	NA	0.234419	0.657286	NA	0.37	NA	3.258681
1326	12	104373600	104373600	G	A	intronic	TDG	NA	NA	NA	intronic	ENSG00000139372	NA	NA	NA	NA	NA	12q23.3	NA	NA	NA	NA	rs3751209	0.32	0.32	0.292	0.337061	0.2207	0.5159	0.1931	0.3132	0.407	0.22	0.51	0.21	0.34	0.2883	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.171363	2.171363	NA	0.232417	0.289234	ID=COSM147594;OCCURENCE=1(stomach)	0.29	NA	3.258583
1326	15	42850380	42850380	A	G	intronic	HAUS2	NA	NA	NA	intronic	ENSG00000137814	NA	NA	NA	NA	NA	15q15.2	NA	NA	NA	NA	rs3986280	0.24	0.24	0.275	0.263578	0.2276	0.0079	0.2075	0.5817	0.1738	0.22	0.0035	0.22	0.55	0.2634	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.520222	1.520222	NA	0.250523	0.503404	NA	0.275	NA	3.258477
1326	17	79227092	79227092	G	A	intronic	SLC38A10	NA	NA	NA	intronic	ENSG00000157637	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs9910167	0.23	0.23	0.214	0.217053	0.2734	0.004	0.245	0.4327	0.0675	0.27	0.0035	0.25	0.42	0.2267	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.562591	NA	NA	0.241439	0.426471	NA	0.225	NA	3.258461
1326	1	11128001	11128001	A	G	intronic	EXOSC10	NA	NA	NA	intronic	ENSG00000171824	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs2791657	0.65	0.65	0.62	0.607228	0.7416	0.7897	0.755	0.2035	0.7219	0.75	0.81	0.75	0.23	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.696988	NA	NA	NA	NA	NA	0.609	NA	3.2584
1326	1	26879792	26879792	T	C	intronic	RPS6KA1	NA	NA	NA	intronic	ENSG00000117676	NA	NA	NA	NA	NA	1p36.11	NA	NA	NA	NA	rs4970489	0.72	0.72	0.729	0.722843	0.7416	0.7847	0.6326	0.7269	0.6984	0.74	0.77	0.64	0.69	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0777	NA	NA	NA	NA	NA	0.659	NA	3.2584
1326	1	159163119	159163119	C	T	intronic	CADM3	NA	NA	NA	intronic	ENSG00000162706	NA	NA	NA	NA	NA	1q23.2	NA	NA	NA	NA	rs862990	0.84	0.84	0.866	0.835463	0.7416	0.9286	0.7233	0.9259	0.7935	0.75	0.94	0.7	0.95	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.055638	NA	NA	NA	NA	NA	0.775	NA	3.2584
1326	4	74447452	74447452	C	T	intronic	RASSF6	NA	NA	NA	intronic	ENSG00000169435	NA	NA	NA	NA	NA	4q13.3	NA	NA	NA	NA	rs1247670	0.75	0.75	0.752	0.758586	0.7416	0.8968	0.5533	0.7194	0.8323	0.74	0.89	0.62	0.7	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.021185	NA	NA	NA	NA	NA	0.696	NA	3.2584
1326	6	47749728	47749728	T	G	upstream	OPN5	NA	NA	NA	UTR5	ENSG00000124818	ENST00000489301:c.-75T>G	NA	NA	NA	NA	6p12.3	NA	NA	NA	NA	rs7741473	0.81	0.81	0.799	0.799521	0.7416	0.9286	0.8314	0.7549	0.7638	0.76	0.94	0.82	0.74	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.924289	NA	NA	NA	NA	NA	0.79	NA	3.2584
1326	8	134107223	134107223	A	G	intronic	SLA,TG	NA	NA	NA	intronic	ENSG00000042832,ENSG00000155926	NA	NA	NA	NA	NA	8q24.22	NA	NA	NA	NA	rs2272706	0.67	0.67	0.675	0.644369	0.7416	0.4206	0.6527	0.8101	0.545	0.75	0.41	0.69	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.174761	NA	NA	NA	NA	NA	0.688	NA	3.2584
1326	9	101539601	101539601	G	A	intronic	ANKS6	NA	NA	NA	intronic	ENSG00000165138	NA	NA	NA	NA	NA	9q22.33	NA	NA	NA	NA	rs4742741	0.62	0.62	0.617	0.622804	0.7416	0.3849	0.6023	0.7579	0.5777	0.72	0.35	0.61	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.242961	2.242961	NA	NA	NA	NA	0.688	NA	3.2584
1326	10	49440346	49440346	C	T	intronic	FRMPD2	NA	NA	NA	intronic	ENSG00000170324	NA	NA	NA	NA	NA	10q11.22	NA	NA	NA	NA	rs6537556	0.28	0.28	0.285	0.282947	0.2505	0.0764	0.183	0.6059	0.1636	0.25	0.06	0.2	0.62	0.2765	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.229431	NA	NA	0.215233	0.548138	NA	0.319	NA	3.257767
1326	1	233490764	233490764	G	T	intronic	KIAA1804	NA	NA	NA	intronic	ENSG00000143674	NA	NA	NA	NA	NA	1q42.2	NA	NA	NA	NA	rs4649219	0.31	0.31	0.291	0.332069	0.2396	0.3373	0.3963	0.3752	0.318	0.23	0.32	0.35	0.39	0.275	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.417803	NA	NA	0.227791	0.341807	ID=COSM146825;OCCURENCE=1(stomach)	0.319	NA	3.257609
1326	10	124034703	124034703	T	C	intronic	BTBD16	NA	NA	NA	intronic	ENSG00000138152	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs7080859	0.49	0.49	0.493	0.483027	0.3748	0.624	0.4726	0.556	0.3579	0.38	0.64	0.47	0.51	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.604167	NA	NA	0.367693	0.559971	NA	0.399	NA	3.257507
1326	8	125155303	125155303	G	A	intergenic	FER1L6,TMEM65	dist=23001;dist=167856	NA	NA	ncRNA_exonic	ENSG00000250727	NA	NA	NA	NA	NA	8q24.13	NA	NA	NA	NA	rs7010103	0.58	0.58	0.556	0.550319	0.7425	0.3839	0.5101	0.5189	0.5951	0.74	0.42	0.57	0.51	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.330586	NA	NA	NA	NA	NA	0.652	NA	3.2575
1326	7	56569906	56569906	C	T	intergenic	DKFZp434L192,LOC100130849	dist=4929;dist=373172	NA	NA	downstream	ENSG00000231504	NA	NA	NA	NA	NA	7p11.2	NA	NA	NA	NA	rs62461260	0.13	0.13	0.12	0.11861	0.2425	0.0367	0.1715	0.0129	0.181	0.22	0.04	0.2	0.02	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.157968	NA	NA	NA	NA	NA	0.188	NA	3.2575
1326	8	91094086	91094086	A	C	intronic	CALB1	NA	NA	NA	intronic	ENSG00000104327	NA	NA	NA	NA	NA	8q21.3	NA	NA	NA	NA	rs7815279	0.71	0.71	0.74	0.709864	0.7425	0.5933	0.6787	0.7988	0.6984	0.74	0.61	0.72	0.77	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.372875	NA	NA	NA	NA	NA	0.696	NA	3.2575
1326	13	30071310	30071310	G	T	intronic	MTUS2	NA	NA	NA	intronic	ENSG00000132938	NA	NA	NA	NA	NA	13q12.3	NA	NA	NA	NA	rs2258198	0.53	0.53	0.51	0.496206	0.7425	0.1865	0.5677	0.4992	0.5072	0.73	0.2	0.63	0.53	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.277474	NA	NA	NA	NA	NA	0.543	NA	3.2575
1326	15	52553453	52553453	C	G	intronic	MYO5C	NA	NA	NA	intronic	ENSG00000128833	NA	NA	NA	NA	NA	15q21.2	NA	NA	NA	NA	rs12903919	NA	NA	0.36	0.338658	0.7425	0.0258	0.5533	0.1006	0.4151	NA	NA	NA	NA	NA	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.150209	NA	NA	NA	NA	NA	0.442	NA	3.2575
1326	13	113889355	113889355	A	G	intronic	CUL4A	NA	NA	NA	intronic	ENSG00000139842	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs2287249	0.24	0.24	0.221	0.271765	0.2346	0.3393	0.3285	0.0809	0.4581	0.25	0.32	0.31	0.09	0.2766	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.072376	NA	NA	0.231395	0.107127	NA	0.217	NA	3.257405
1326	12	42707437	42707437	C	G	intronic	ZCRB1	NA	NA	NA	intronic	ENSG00000134283,ENSG00000139168	NA	NA	NA	NA	NA	12q12	NA	NA	NA	NA	rs3761677	0.28	0.28	0.24	0.234824	0.3648	0.1776	0.3588	0.121	0.226	0.37	0.19	0.41	0.13	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.111738	NA	NA	0.378064	0.145954	ID=COSN164218;OCCURENCE=1(NS)	0.225	NA	3.257136
1326	8	125155649	125155649	C	G	intergenic	FER1L6,TMEM65	dist=23347;dist=167510	NA	NA	ncRNA_exonic	ENSG00000250727	NA	NA	NA	NA	NA	8q24.13	NA	NA	NA	NA	rs4380915	0.6	0.6	0.596	0.577276	0.7435	0.3839	0.5216	0.6142	0.5951	0.74	0.42	0.58	0.59	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.457076	NA	NA	NA	NA	NA	0.688	NA	3.2565
1326	9	137019511	137019511	T	C	intronic	WDR5	NA	NA	NA	intronic	ENSG00000196363	NA	NA	NA	NA	NA	9q34.2	NA	NA	NA	NA	rs28703244	0.64	0.64	0.64	0.611022	0.7435	0.5625	0.7017	0.5446	0.5501	0.74	0.59	0.69	0.52	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.231942	NA	NA	NA	NA	NA	0.652	NA	3.2565
1326	11	20959533	20959533	G	A	intronic	NELL1	NA	NA	NA	intronic	ENSG00000165973	NA	NA	NA	NA	NA	11p15.1	NA	NA	NA	NA	rs1880085	0.58	0.58	0.53	0.563698	0.7435	0.5595	0.6974	0.2511	0.7106	0.74	0.58	0.68	0.26	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.378176	NA	NA	NA	NA	NA	0.616	NA	3.2565
1326	15	40557268	40557268	C	A	intronic	PAK6	NA	NA	NA	intronic	ENSG00000137843,ENSG00000259288	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs936216	0.71	0.71	0.701	0.660942	0.7435	0.8075	0.6095	0.5386	0.6268	0.75	0.81	0.63	0.57	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.816702	2.816702	NA	NA	NA	NA	0.58	NA	3.2565
1326	3	64589851	64589851	A	G	intronic	ADAMTS9	NA	NA	NA	intronic	ENSG00000163638	NA	NA	NA	NA	NA	3p14.1	NA	NA	NA	NA	rs9985304	0.46	0.46	0.463	0.494609	0.3857	0.5685	0.3689	0.5333	0.5675	0.38	0.55	0.38	0.52	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.678569	NA	NA	0.358112	0.523402	NA	0.486	NA	3.256188
1326	5	176813404	176813404	C	T	intronic	SLC34A1	NA	NA	NA	intronic	ENSG00000131183	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs3812036	0.19	0.19	0.174	0.174321	0.2644	0.1488	0.2392	0.0514	0.228	0.26	0.17	0.26	0.05	0.2274	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.941561	NA	NA	0.252209	0.074217	NA	0.217	NA	3.255991
1326	7	150645682	150645682	G	A	intronic	KCNH2	NA	NA	NA	intronic	ENSG00000055118	NA	NA	NA	NA	NA	7q36.1	NA	NA	Name=3	NA	rs2968860	0.7	0.7	0.722	0.709465	0.5606	0.878	0.611	0.7625	0.6871	0.55	0.87	0.65	0.77	0.6225	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.162943	NA	NA	0.561047	0.725601	NA	0.616	NA	3.255853
1326	12	18747528	18747528	C	T	intronic	PIK3C2G	NA	NA	NA	intronic	ENSG00000139144	NA	NA	NA	NA	NA	12p12.3	NA	NA	NA	NA	rs11044211	0.31	0.31	0.331	0.328075	0.2425	0.1925	0.2738	0.5908	0.2393	0.23	0.22	0.27	0.57	0.264	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.561172	NA	NA	0.237651	0.532906	NA	0.493	NA	3.255849
1326	10	106675585	106675585	C	T	intronic	SORCS3	NA	NA	NA	intronic	ENSG00000156395	NA	NA	NA	NA	NA	10q25.1	NA	NA	NA	NA	rs6584635	0.3	0.3	0.31	0.310304	0.2445	0.1538	0.2421	0.618	0.1718	0.24	0.13	0.26	0.62	0.2514	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.506656	NA	NA	0.248372	0.535179	ID=COSM147039;OCCURENCE=1(stomach)	0.246	NA	3.255728
1326	1	207500293	207500293	C	T	intronic	CD55	NA	NA	NA	intronic	ENSG00000196352	NA	NA	NA	NA	NA	1q32.2	NA	NA	NA	NA	rs4844591	0.65	0.65	0.64	0.621406	0.7445	0.4107	0.7032	0.6959	0.5532	0.74	0.47	0.69	0.67	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.153777	NA	NA	NA	NA	NA	0.761	NA	3.2555
1326	4	99408106	99408106	T	C	intronic	TSPAN5	NA	NA	NA	intronic	ENSG00000168785	NA	NA	NA	NA	NA	4q23	NA	NA	NA	NA	rs6838913	0.74	0.74	0.73	0.771765	0.7445	0.5982	0.8444	0.8222	0.8589	0.74	0.62	0.81	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.086758	NA	NA	NA	NA	NA	0.775	NA	3.2555
1326	4	165577453	165577453	G	A	ncRNA_intronic	MIR5684	NA	NA	NA	intergenic	ENSG00000223037,ENSG00000248162	dist=35464;dist=69009	NA	NA	NA	NA	4q32.3	NA	NA	NA	NA	rs6536833	0.66	0.66	0.663	0.653954	0.7445	0.4117	0.7622	0.6831	0.6943	0.74	0.41	0.75	0.74	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.916909	NA	NA	NA	NA	NA	0.761	NA	3.2555
1326	6	27368031	27368031	T	C	intronic	ZNF391	NA	NA	NA	intronic	ENSG00000124613	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs766092	0.68	0.68	0.693	0.685903	0.7445	0.5813	0.7277	0.6679	0.728	0.74	0.56	0.7	0.7	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.129676	NA	NA	NA	NA	NA	0.71	NA	3.2555
1326	10	43601749	43601749	T	C	intronic	RET	NA	NA	NA	intronic	ENSG00000165731	NA	NA	NA	NA	NA	10q11.21	NA	NA	NA	NA	rs2742243	0.72	0.72	0.73	0.728435	0.7445	0.5198	0.7435	0.8949	0.6912	0.73	0.54	0.79	0.87	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.083491	NA	NA	NA	NA	NA	0.797	NA	3.2555
1326	10	43604390	43604390	A	T	intronic	RET	NA	NA	NA	intronic	ENSG00000165731	NA	NA	NA	NA	NA	10q11.21	NA	NA	NA	NA	rs1864404	0.74	0.74	0.741	0.751997	0.7445	0.5198	0.7536	0.9788	0.6912	0.73	0.54	0.8	0.97	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.254161	NA	NA	NA	NA	NA	0.804	NA	3.2555
1326	17	3660864	3660864	G	A	intronic	ITGAE	NA	NA	NA	intronic	ENSG00000083457	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs170213	0.58	0.58	0.592	0.555911	0.7445	0.2411	0.5173	0.7685	0.4264	0.74	0.22	0.57	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.279201	NA	NA	NA	NA	NA	0.558	NA	3.2555
1327	11	9370624	9370624	G	A	intergenic	TMEM41B,IPO7	dist=34309;dist=35545	NA	NA	intergenic	ENSG00000166471,ENSG00000205339	dist=34297;dist=35545	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs7950295	0.11	0.11	0.107	0.109225	0.0785	0.1498	0.1455	0.1203	0.0583	0.08	0.16	0.13	0.09	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.019224	NA	NA	NA	NA	NA	0.087	NA	3.2548334
1327	2	231739564	231739564	A	G	intronic	ITM2C	NA	NA	NA	intronic	ENSG00000135916	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs1561324	0.85	0.85	0.86	0.872604	0.7455	0.9435	0.8588	0.9228	0.8722	0.75	0.94	0.85	0.91	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.648805	NA	NA	NA	NA	NA	0.819	NA	3.2545
1327	14	107108221	107108221	G	A	intergenic	LINC00221,NONE	dist=156692;dist=NONE	NA	NA	downstream	ENSG00000253936	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs8008646	0.33	0.33	0.296	0.389776	0.2455	0.3393	0.2997	0.4425	0.5828	0.24	0.35	0.31	0.45	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.587515	NA	NA	NA	NA	NA	0.319	NA	3.2545
1327	15	48736684	48736684	A	T	intronic	FBN1	NA	NA	NA	intronic	ENSG00000166147	NA	NA	NA	NA	NA	15q21.1	NA	NA	NA	NA	rs2303502	0.63	0.63	0.59	0.620807	0.7455	0.5982	0.7233	0.4002	0.7413	0.75	0.58	0.77	0.41	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.502183	NA	NA	NA	NA	NA	0.667	NA	3.2545
1327	15	64418221	64418221	C	G	intronic	SNX1	NA	NA	NA	intronic	ENSG00000028528	NA	NA	NA	NA	NA	15q22.31	NA	NA	NA	NA	rs2290119	0.6	0.6	0.55	0.477037	0.7455	0.8155	0.5965	0.0666	0.3221	0.76	0.81	0.62	0.09	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.482154	NA	NA	NA	NA	NA	0.486	NA	3.2545
1327	21	19190427	19190427	C	T	intronic	C21orf91	NA	NA	NA	intronic	ENSG00000154642	NA	NA	NA	NA	NA	21q21.1	NA	NA	NA	NA	rs243556	0.87	0.87	0.875	0.876797	0.7455	0.9395	0.8473	0.9887	0.817	0.75	0.95	0.83	0.99	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.077669	NA	NA	NA	NA	NA	0.935	NA	3.2545
1327	6	29857504	29857504	G	A	ncRNA_exonic	HLA-H	NA	NA	NA	ncRNA_exonic	ENSG00000206341	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs28628412	0.67	0.67	0.608	0.672923	0.7217	0.5486	0.7464	0.7156	0.6411	0.69	0.52	0.69	0.78	0.6909	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.917648	NA	NA	NA	NA	NA	NA	NA	3.2540666
1327	11	119043745	119043745	C	T	intronic	NLRX1	NA	NA	NA	intronic	ENSG00000160703	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs561830	0.3	0.3	0.322	0.263978	0.2505	0.3889	0.2118	0.3033	0.1329	0.25	0.43	0.23	0.28	0.2425	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.77348	NA	NA	0.253144	0.285227	NA	0.377	NA	3.253856
1327	2	160873021	160873021	G	A	intronic	PLA2R1	NA	NA	NA	intronic	ENSG00000153246	NA	NA	NA	NA	NA	2q24.2	NA	NA	NA	NA	rs2715939	0.72	0.72	0.695	0.702476	0.7465	0.8552	0.7594	0.5983	0.6002	0.69	0.83	0.73	0.61	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.106418	NA	NA	NA	NA	NA	0.688	NA	3.2535
1327	2	160876827	160876827	A	G	intronic	PLA2R1	NA	NA	NA	intronic	ENSG00000153246	NA	NA	NA	NA	NA	2q24.2	NA	NA	NA	NA	rs1511213	0.75	0.75	0.727	0.702476	0.7465	0.8552	0.7594	0.5991	0.5992	0.74	0.86	0.73	0.63	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.752526	1.752526	NA	NA	NA	NA	0.717	NA	3.2535
1327	19	21838146	21838146	C	T	intergenic	ZNF429,ZNF100	dist=117067;dist=68697	NA	NA	ncRNA_exonic	ENSG00000268278	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs7351088	0.57	0.57	0.58	0.623802	0.7465	0.7202	0.7233	0.3601	0.684	0.65	0.63	0.67	0.31	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.697665	NA	NA	NA	NA	NA	NA	NA	3.2535
1327	19	21838147	21838147	A	G	intergenic	ZNF429,ZNF100	dist=117068;dist=68696	NA	NA	ncRNA_exonic	ENSG00000268278	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs7351087	0.57	0.57	0.576	0.623802	0.7465	0.7202	0.7233	0.3601	0.684	0.65	0.63	0.67	0.31	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.934295	NA	NA	NA	NA	NA	NA	NA	3.2535
1327	22	22922640	22922640	C	G	intergenic	LOC648691,POM121L1P	dist=13633;dist=51388	NA	NA	ncRNA_exonic	ENSG00000253120	NA	NA	NA	NA	NA	22q11.22	NA	NA	NA	NA	rs464317	0.79	0.79	0.792	0.78095	0.7465	0.7907	0.8415	0.7753	0.771	0.75	0.8	0.81	0.81	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.229253	NA	NA	NA	NA	NA	0.732	NA	3.2535
1327	8	87552426	87552426	T	C	intronic	CPNE3	NA	NA	NA	intronic	ENSG00000085719	NA	NA	NA	NA	NA	8q21.3	NA	NA	NA	NA	rs16915389	0.18	0.18	0.16	0.164936	0.2555	0.0496	0.1383	0.211	0.1472	0.27	0.06	0.18	0.2	0.2204	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.636804	1.636804	NA	0.270761	0.243078	NA	0.159	NA	3.253339
1327	8	39694610	39694610	C	T	intronic	ADAM2	NA	NA	NA	intronic	ENSG00000104755	NA	NA	NA	NA	NA	8p11.22	NA	NA	NA	NA	rs13255763	0.25	0.25	0.219	0.215256	0.2644	0.2391	0.1844	0.2829	0.0706	0.26	0.26	0.2	0.27	0.225	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.274786	2.274786	NA	0.257279	0.265348	NA	0.145	NA	3.253321
1327	10	132915202	132915202	A	G	intronic	TCERG1L	NA	NA	NA	intronic	ENSG00000176769	NA	NA	NA	NA	NA	10q26.3	NA	NA	NA	NA	rs2298193	0.3	0.3	0.28	0.269169	0.2416	0.4157	0.2622	0.1989	0.2464	0.23	0.48	0.28	0.19	0.2848	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.653016	NA	NA	0.220284	0.212892	NA	0.312	NA	3.253316
1327	6	169635010	169635010	G	A	intronic	THBS2	NA	NA	NA	ncRNA_intronic	ENSG00000226445	NA	NA	NA	NA	NA	6q27	NA	NA	NA	NA	rs9406328	0.35	0.35	0.307	0.355631	0.3539	0.4772	0.3761	0.1717	0.4663	0.35	0.51	0.37	0.15	0.3684	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.339145	NA	NA	0.357791	0.190054	NA	0.348	NA	3.2532423
1327	7	142334648	142334648	A	T	intergenic	LOC730441,MTRNR2L6	dist=362580;dist=39483	NA	NA	exonic	ENSG00000211747	NA	nonsynonymous SNV	ENSG00000211747:ENST00000390394:exon2:c.A70T:p.R24W	NA	NA	7q34	NA	NA	NA	NA	rs17210	0.48	0.48	0.433	0.427117	0.5497	0.6825	0.3156	0.1596	0.4785	0.56	0.67	0.38	0.2	0.4972	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.636977	1.636977	NA	0.533245	0.1926	NA	0.399	NA	3.2531884
1327	3	158372477	158372477	C	T	intronic	GFM1	NA	NA	NA	intronic	ENSG00000079257,ENSG00000168827	NA	NA	NA	NA	NA	3q25.32	NA	NA	NA	NA	rs62286656	0.32	0.32	0.341	0.343251	0.3847	0.1815	0.3285	0.4092	0.3885	0.39	0.16	0.31	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.91174	NA	NA	0.362492	0.399566	NA	0.377	NA	3.252808
1327	1	200080463	200080463	C	T	intronic	NR5A2	NA	NA	NA	intronic	ENSG00000116833	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs3828110	0.36	0.36	NA	0.450679	0.4324	0.2937	0.5216	0.6467	0.316	0.35	0.24	0.37	0.49	0.315	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.180082	NA	NA	NA	NA	NA	0.391	NA	3.2526
1327	2	44187829	44187829	A	C	intronic	LRPPRC	NA	NA	NA	intronic	ENSG00000138095	NA	NA	NA	NA	NA	2p21	NA	NA	NA	NA	rs10190161	0.55	0.55	0.552	0.530551	0.7475	0.0446	0.5692	0.7481	0.4867	0.75	0.05	0.64	0.73	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.140554	NA	NA	NA	NA	NA	0.652	NA	3.2525
1327	5	9066464	9066464	A	G	intronic	SEMA5A	NA	NA	NA	intronic	ENSG00000112902	NA	NA	NA	NA	NA	5p15.31	NA	NA	NA	NA	rs786847	0.73	0.73	0.683	0.705072	0.7475	0.9315	0.7911	0.4092	0.7669	0.75	0.93	0.79	0.43	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.048074	NA	NA	NA	NA	NA	0.667	NA	3.2525
1327	6	41504126	41504126	C	T	intergenic	NCR2,FOXP4	dist=185501;dist=10038	NA	NA	ncRNA_intronic	ENSG00000234753	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs2496652	0.51	0.51	0.469	0.456669	0.7475	0.3839	0.5735	0.1884	0.5123	0.76	0.41	0.59	0.18	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.224198	2.224198	NA	NA	NA	NA	0.406	NA	3.2525
1327	14	20824415	20824415	G	T	intronic	PARP2	NA	NA	NA	intronic	ENSG00000129484	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs3093933	0.2	0.2	0.165	0.222244	0.2525	0.2579	0.2017	0.0545	0.3957	0.25	0.24	0.2	0.07	0.2488	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.465385	NA	NA	0.246338	0.0939	NA	0.196	NA	3.252362
1327	11	28045260	28045260	A	G	intronic	KIF18A	NA	NA	NA	intronic	ENSG00000121621	NA	NA	NA	NA	NA	11p14.1	NA	NA	NA	NA	rs33937991	0.24	0.24	0.247	0.232628	0.2475	0.0774	0.1686	0.469	0.1033	0.24	0.09	0.21	0.43	0.2506	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.705565	NA	NA	0.249709	0.442955	NA	0.29	NA	3.252191
1327	1	228601638	228601638	T	C	intronic	TRIM17	NA	NA	NA	intronic	ENSG00000162931	NA	NA	NA	NA	NA	1q42.13	NA	NA	NA	NA	rs472594	0.43	0.43	0.446	0.444688	0.2078	0.4365	0.3285	0.8495	0.2321	0.21	0.46	0.35	0.81	0.3184	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.419844	NA	NA	0.221744	0.738084	NA	0.406	NA	3.252056
1327	18	51904641	51904641	A	G	UTR3	C18orf54	NM_173529:c.*25A>G	NA	NA	UTR3	ENSG00000166845	ENST00000578138:c.*25A>G,ENST00000300091:c.*25A>G,ENST00000382911:c.*25A>G,ENST00000579594:c.*25A>G	NA	NA	Score=333;Name=lod=30	NA	18q21.2	NA	NA	NA	NA	rs3753056	0.75	0.75	0.729	0.760583	0.6809	0.7054	0.7378	0.8971	0.7311	0.7	0.72	0.72	0.89	0.7152	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.317611	NA	NA	0.685698	0.851339	NA	0.783	NA	3.2515354
1327	6	30154351	30154351	A	G	intronic	TRIM26	NA	NA	NA	intronic	ENSG00000234127	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs61285697	0.17	0.17	0.123	0.176518	0.1789	0.376	0.1037	0.0113	0.2434	0.17	0.32	0.12	0.02	0.4776	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.873555	NA	NA	0.092052	0.022636	NA	0.174	NA	3.251448
1327	18	51904644	51904644	G	A	UTR3	C18orf54	NM_173529:c.*28G>A	NA	NA	UTR3	ENSG00000166845	ENST00000578138:c.*28G>A,ENST00000300091:c.*28G>A,ENST00000382911:c.*28G>A,ENST00000579594:c.*28G>A	NA	NA	Score=333;Name=lod=30	NA	18q21.2	NA	NA	NA	NA	rs3753055	0.75	0.75	0.735	0.761781	0.6809	0.7054	0.7406	0.8994	0.7321	0.7	0.72	0.72	0.89	0.7153	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.310544	NA	NA	0.685698	0.854517	NA	0.783	NA	3.2514354
1327	1	16377108	16377108	G	C	intronic	CLCNKB	NA	NA	NA	intronic	ENSG00000184908	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs35480349	0.16	0.16	0.122	0.16254	0.2684	0.0109	0.3314	0.0159	0.2883	0.28	0.01	0.32	0.02	0.2314	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.041787	NA	NA	0.248837	0.048343	NA	0.123	NA	3.251363
1327	2	219250003	219250003	G	C	intronic	SLC11A1	NA	NA	NA	intronic	ENSG00000018280	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs3731865	0.17	0.17	0.133	0.144169	0.2525	0.0972	0.2637	0.0582	0.1125	0.23	0.11	0.25	0.07	0.2283	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.345926	NA	NA	0.268256	0.094644	NA	0.145	NA	3.250944
1327	11	9370702	9370702	C	T	intergenic	TMEM41B,IPO7	dist=34387;dist=35467	NA	NA	intergenic	ENSG00000166471,ENSG00000205339	dist=34375;dist=35467	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs11042304	0.14	0.14	0.131	0.153954	0.0825	0.1458	0.1614	0.2731	0.0695	0.08	0.15	0.14	0.23	NA	0.23	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.999379	1.999379	NA	NA	NA	NA	0.145	NA	3.2508334
1327	20	18474566	18474566	C	G	intronic	RBBP9	NA	NA	NA	intronic	ENSG00000089050	NA	NA	NA	NA	NA	20p11.23	NA	NA	NA	NA	rs17734238	0.16	0.16	0.145	0.173922	0.2555	0.0615	0.2046	0.1664	0.1943	0.25	0.05	0.21	0.14	0.2256	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.065639	NA	NA	0.26814	0.17113	NA	0.109	NA	3.25076
1327	14	74083846	74083846	C	T	UTR5	ACOT6	NM_001037162:c.-33C>T	NA	NA	ncRNA_exonic	ENSG00000258603	NA	NA	NA	NA	NA	14q24.3	NA	NA	NA	NA	rs12891009	0.46	0.46	0.441	0.458466	0.4165	0.6468	0.5447	0.2731	0.4969	0.39	0.67	0.53	0.26	0.4366	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.428038	NA	NA	0.396395	0.294825	NA	0.319	NA	3.250505
1327	5	149932602	149932602	C	T	intronic	NDST1	NA	NA	NA	intronic	ENSG00000070614	NA	NA	NA	NA	NA	5q33.1	NA	NA	NA	NA	rs6893285	0.63	0.63	0.546	0.635783	0.7495	0.5188	0.7349	0.5787	0.6462	0.75	0.48	0.74	0.52	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.099259	NA	NA	NA	NA	NA	0.681	NA	3.2505
1327	6	36715833	36715833	A	T	intronic	CPNE5	NA	NA	NA	intronic	ENSG00000124772	NA	NA	NA	NA	NA	6p21.2	NA	NA	NA	NA	rs1010790	0.73	0.73	0.786	0.702276	0.7495	0.6875	0.5735	0.7791	0.6564	0.76	0.73	0.62	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.386719	NA	NA	NA	NA	NA	0.746	NA	3.2505
1327	10	18836957	18836957	C	T	intronic	NSUN6	NA	NA	NA	intronic	ENSG00000241058	NA	NA	NA	NA	NA	10p12.31	NA	NA	NA	NA	rs4747353	0.8	0.8	0.808	0.802915	0.7495	0.9613	0.7608	0.77	0.7689	0.76	0.97	0.73	0.73	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.330808	NA	NA	NA	NA	NA	0.638	NA	3.2505
1327	15	79027814	79027814	G	T	intergenic	CHRNB4,LOC646938	dist=94227;dist=16565	NA	NA	ncRNA_exonic	ENSG00000261303	NA	NA	NA	NA	NA	15q25.1	NA	NA	NA	NA	rs11072799	0.55	0.55	0.517	0.489617	0.7495	0.4881	0.6311	0.1891	0.5297	0.74	0.52	0.62	0.24	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.892074	NA	0.04	NA	NA	NA	0.63	NA	3.2505
1327	4	67142335	67142335	A	G	intergenic	LOC100144602,CENPC1	dist=583231;dist=1195654	NA	NA	upstream	ENSG00000221563	NA	NA	NA	NA	NA	4q13.2	NA	NA	NA	NA	rs35732546	0.37	0.37	0.379	0.384185	0.2495	0.3651	0.2032	0.6899	0.2577	0.25	0.35	0.21	0.7	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.648666	NA	NA	NA	NA	NA	0.413	NA	3.2505
1327	7	36466669	36466669	T	G	intronic	ANLN	NA	NA	NA	intronic	ENSG00000011426	NA	NA	NA	NA	NA	7p14.2	NA	NA	NA	NA	rs3815485	0.28	0.28	0.196	0.274161	0.2266	0.4087	0.2522	0.1884	0.316	0.25	0.43	0.23	0.18	0.317	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.758205	NA	NA	0.20593	0.176577	NA	0.21	NA	3.25047
1327	14	51228655	51228655	C	G	intronic	NIN	NA	NA	NA	intronic	ENSG00000100503	NA	NA	NA	NA	NA	14q22.1	NA	NA	NA	NA	rs12883882	0.18	0.18	0.172	0.172324	0.2753	0.1567	0.2507	0.0386	0.2076	0.25	0.15	0.22	0.06	0.2226	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.306671	NA	NA	0.25186	0.078075	NA	0.109	NA	3.25024
1327	12	4737459	4737459	C	T	exonic	AKAP3	NA	synonymous SNV	AKAP3:NM_006422:exon4:c.G609A:p.S203S	exonic	ENSG00000111254	NA	synonymous SNV	ENSG00000111254:ENST00000228850:exon4:c.G609A:p.S203S,ENSG00000111254:ENST00000545990:exon5:c.G609A:p.S203S	NA	NA	12p13.32	NA	NA	NA	NA	rs2072356	0.73	0.73	0.722	0.707268	0.832	0.6637	0.8256	0.587	0.7025	0.84	0.64	0.81	0.61	0.7756	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.670418	NA	NA	0.808953	0.599637	NA	0.783	NA	3.2501136
1327	19	51015574	51015574	G	C	intronic	ASPDH	NA	NA	NA	intronic	ENSG00000204653	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs12976250	0.19	0.19	0.2	0.198283	0.2366	0.126	0.2291	0.171	0.2485	0.25	0.13	0.2	0.18	0.2434	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.91729	NA	NA	0.270295	0.188238	NA	0.203	NA	3.249705
1327	1	26899687	26899687	C	A	intronic	RPS6KA1	NA	NA	NA	intronic	ENSG00000117676	NA	NA	NA	NA	NA	1p36.11	NA	NA	NA	NA	rs282178	0.34	0.34	0.317	0.329073	0.2286	0.4623	0.4294	0.2965	0.2679	0.24	0.47	0.41	0.28	0.2927	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.027878	NA	NA	0.22907	0.289378	NA	0.275	NA	3.24963
1327	12	111895203	111895203	C	G	intronic	ATXN2	NA	NA	NA	intronic	ENSG00000204842	NA	NA	NA	NA	NA	12q24.12	NA	NA	NA	NA	rs2301622	0.54	0.54	0.541	0.535343	0.2028	0.8919	0.3184	0.7753	0.3395	0.2	0.89	0.36	0.77	0.3395	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.495413	NA	NA	0.20814	0.667045	NA	0.5	NA	3.24956
1327	2	128015367	128015367	C	T	intronic	ERCC3	NA	NA	NA	intronic	ENSG00000163161	NA	NA	NA	NA	NA	2q14.3	NA	NA	NA	NA	rs4662718	0.83	0.83	0.796	0.813698	0.7505	0.999	0.8573	0.733	0.7658	0.76	1	0.86	0.72	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.047598	NA	NA	NA	NA	NA	0.638	NA	3.2495
1327	2	128028792	128028792	T	C	intronic	ERCC3	NA	NA	NA	intronic	ENSG00000163161	NA	NA	NA	NA	NA	2q14.3	NA	NA	NA	NA	rs4150499	0.84	0.84	0.807	0.819489	0.7505	0.999	0.8559	0.7557	0.7658	0.76	1	0.86	0.76	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.241233	NA	NA	NA	NA	NA	0.659	NA	3.2495
1327	14	24735624	24735624	A	G	intronic	RABGGTA	NA	NA	NA	intronic	ENSG00000100949	NA	NA	NA	NA	NA	14q12	NA	NA	NA	NA	rs2877612	0.34	0.34	0.335	0.363818	0.2197	0.4435	0.4366	0.3533	0.3926	0.23	0.48	0.38	0.33	0.3003	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5.048976	5.048976	NA	0.230806	0.320309	NA	0.196	NA	3.249194
1327	16	15128416	15128416	A	G	intronic	PDXDC1	NA	NA	NA	intronic	ENSG00000179889	NA	NA	NA	NA	NA	16p13.11	NA	NA	NA	NA	rs35811052	0.22	0.22	0.195	0.196086	0.2525	0.1111	0.3862	0.143	0.1626	0.27	0.11	0.37	0.14	0.2388	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.178695	NA	NA	0.259767	0.173873	NA	0.254	NA	3.248933
1327	11	83691458	83691458	G	C	intronic	DLG2	NA	NA	NA	intronic	ENSG00000150672	NA	NA	NA	NA	NA	11q14.1	NA	NA	NA	NA	rs10792700	0.64	0.64	0.611	0.622804	0.7515	0.6875	0.6772	0.3699	0.727	0.73	0.68	0.68	0.4	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.680018	NA	NA	NA	NA	NA	0.623	NA	3.2485
1327	7	538277	538277	G	C	intronic	PDGFA	NA	NA	NA	intronic	ENSG00000197461	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs34223855	0.29	0.29	0.253	0.307308	0.3827	0.3036	0.255	0.1694	0.4571	0.35	0.3	0.3	0.19	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.996949	NA	NA	0.36895	0.205925	NA	0.341	NA	3.24835
1327	10	100401745	100401745	T	C	intronic	HPSE2	NA	NA	NA	intronic	ENSG00000172987	NA	NA	NA	NA	NA	10q24.2	NA	NA	NA	NA	rs693656	0.38	0.38	0.355	0.376997	0.2435	0.5456	0.4395	0.4259	0.2301	0.25	0.5	0.4	0.42	0.2922	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.310382	NA	NA	0.216163	0.406945	NA	0.268	NA	3.248137
1327	19	8032432	8032432	G	A	intronic	ELAVL1	NA	NA	NA	intronic	ENSG00000066044	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs3826740	0.25	0.25	0.215	0.22504	0.2286	0.4782	0.2565	0.0151	0.2219	0.24	0.46	0.27	0.02	0.2711	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.060471	NA	NA	0.252209	0.056968	NA	0.21	NA	3.248091
1327	5	169472765	169472765	C	G	intronic	DOCK2	NA	NA	NA	intronic	ENSG00000134516	NA	NA	NA	NA	NA	5q35.1	NA	NA	NA	NA	rs6884561	0.5	0.5	0.507	0.482827	0.3897	0.5863	0.4683	0.5537	0.3865	0.4	0.6	0.47	0.56	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.694185	NA	NA	0.362351	0.507948	NA	0.428	NA	3.247949
1327	6	29858256	29858256	T	G	ncRNA_exonic	HLA-H	NA	NA	NA	ncRNA_exonic	ENSG00000206341	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs3128874	0.69	0.69	0.663	0.654553	0.7217	0.5308	0.7349	0.6747	0.6288	0.71	0.55	0.71	0.79	0.6974	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.041676	NA	NA	NA	NA	NA	0.572	NA	3.2475666
1327	16	50733374	50733374	G	T	intronic	NOD2	NA	NA	NA	intronic	ENSG00000167207	NA	NA	NA	NA	NA	16q12.1	NA	NA	NA	NA	rs2076753	0.14	0.14	0.132	0.115615	0.2734	0.0089	0.1671	0.0514	0.1135	0.27	0.0017	0.2	0.06	0.1982	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.371538	1.371538	NA	0.280879	0.077151	NA	0.21	NA	3.247521
1327	2	98797744	98797744	C	T	intronic	VWA3B	NA	NA	NA	intronic	ENSG00000168658	NA	NA	NA	NA	NA	2q11.2	NA	NA	NA	NA	rs4851890	0.69	0.69	0.698	0.727636	0.7525	0.7262	0.6081	0.6263	0.9254	0.74	0.71	0.64	0.64	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.143296	NA	NA	NA	NA	NA	0.732	NA	3.2475
1327	10	63977069	63977069	A	T	intronic	RTKN2	NA	NA	NA	intronic	ENSG00000182010	NA	NA	NA	NA	NA	10q21.2	NA	NA	NA	NA	rs1432414	0.8	0.8	0.787	0.754193	0.7525	0.8988	0.8098	0.7557	0.5654	0.76	0.91	0.8	0.73	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.229229	NA	NA	NA	NA	NA	0.667	NA	3.2475
1327	12	96263439	96263439	C	A	intronic	CCDC38	NA	NA	NA	intronic	ENSG00000139343,ENSG00000165972	NA	NA	NA	NA	NA	12q23.1	NA	NA	NA	NA	rs10735336	0.64	0.64	0.633	0.653355	0.7525	0.3829	0.5504	0.8041	0.6994	0.77	0.34	0.61	0.81	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.890728	NA	NA	NA	NA	NA	0.13	NA	3.2475
1327	19	4117705	4117705	T	C	intronic	MAP2K2	NA	NA	NA	intronic	ENSG00000126934	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs350890	0.81	0.81	0.793	0.795727	0.7525	0.9107	0.8098	0.7746	0.7403	0.77	0.92	0.81	0.75	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.437191	NA	NA	NA	NA	ID=COSN165690;OCCURENCE=1(breast)	0.681	NA	3.2475
1327	8	82629447	82629447	G	A	intronic	ZFAND1	NA	NA	NA	intronic	ENSG00000104231	NA	NA	NA	NA	NA	8q21.13	NA	NA	NA	NA	rs62512330	0.37	0.37	0.355	0.329473	0.2416	0.7222	0.2478	0.2239	0.2157	0.24	0.72	0.25	0.26	0.2805	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.922679	NA	NA	0.230473	0.243305	NA	0.254	NA	3.247427
1327	13	110862303	110862303	G	A	intronic	COL4A1	NA	NA	NA	intronic	ENSG00000187498	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs9521649	0.19	0.19	0.173	0.185104	0.2495	0.0546	0.3559	0.1505	0.1789	0.26	0.05	0.3	0.17	0.2429	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.979342	NA	NA	0.260233	0.167726	ID=COSM147716;OCCURENCE=1(stomach)	0.21	NA	3.247367
1327	6	169634809	169634809	C	T	intronic	THBS2	NA	NA	NA	ncRNA_intronic	ENSG00000226445	NA	NA	NA	NA	NA	6q27	NA	NA	NA	NA	rs9393156	0.35	0.35	0.342	0.355032	0.3549	0.4772	0.3761	0.1687	0.4663	0.35	0.51	0.37	0.15	0.3674	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.395695	NA	NA	0.363837	0.193827	NA	0.355	NA	3.2471963
1327	19	2042886	2042886	A	G	intronic	MKNK2	NA	NA	NA	intronic	ENSG00000099875	NA	NA	NA	NA	NA	19p13.3	NA	NA	Name=3	NA	rs7253052	0.67	0.67	0.685	0.714856	0.5547	0.6806	0.6599	0.9319	0.6605	0.52	0.67	0.68	0.9	0.6456	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.083814	NA	NA	0.552521	0.856133	NA	0.739	NA	3.247179
1327	5	35875593	35875593	A	T	intronic	IL7R	NA	NA	NA	exonic	ENSG00000168685	NA	synonymous SNV	ENSG00000168685:ENST00000505875:exon1:c.A78T:p.L26L	NA	NA	5p13.2	NA	NA	NA	NA	rs987106	0.46	0.46	0.445	0.44988	0.5547	0.2728	0.3732	0.553	0.4397	0.57	0.26	0.43	0.54	0.5001	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.442126	NA	NA	0.531977	0.570813	ID=COSN167436;OCCURENCE=1(large_intestine)	0.529	NA	3.2465563
1327	3	184046355	184046355	C	T	intronic	EIF4G1	NA	NA	NA	intronic	ENSG00000114867,ENSG00000145191	NA	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs1879244	0.78	0.78	0.814	0.778554	0.7535	0.6429	0.7968	0.9826	0.6554	0.76	0.63	0.78	0.97	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.368931	NA	NA	NA	NA	NA	0.841	NA	3.2465
1327	4	143226768	143226768	G	T	intronic	INPP4B	NA	NA	NA	intronic	ENSG00000109452	NA	NA	NA	NA	NA	4q31.21	NA	NA	NA	NA	rs2627808	0.68	0.68	0.65	0.647764	0.7535	0.7113	0.7378	0.497	0.6135	0.76	0.71	0.72	0.5	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.189771	NA	NA	NA	NA	NA	0.652	NA	3.2465
1327	17	78079481	78079481	C	G	intronic	GAA	NA	NA	NA	intronic	ENSG00000171298	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs8069491	0.61	0.61	0.605	0.602436	0.7535	0.5437	0.5418	0.5212	0.6605	0.75	0.57	0.55	0.5	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.645024	NA	NA	NA	NA	NA	0.645	NA	3.2465
1327	15	86227952	86227952	A	G	intronic	AKAP13	NA	NA	NA	intronic	ENSG00000170776	NA	NA	NA	NA	NA	15q25.3	NA	NA	NA	NA	rs2306225	0.15	0.15	0.124	0.129792	0.2793	0.0188	0.2262	0.0098	0.184	0.28	0.03	0.24	0.01	0.2173	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.728016	NA	NA	0.257734	0.043201	NA	0.217	NA	3.245666
1327	14	106235611	106235611	A	T	intergenic	ELK2AP,KIAA0125	dist=96467;dist=148227	NA	NA	exonic	ENSG00000211897	NA	unknown	UNKNOWN	NA	NA	14q32.33	NA	NA	NA	NA	rs1051112	0.46	0.46	0.368	0.493211	0.4881	0.5327	0.6124	0.2897	0.6483	0.45	0.61	0.57	0.22	0.433	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.771996	NA	1	NA	NA	NA	NA	NA	3.2455667
1327	4	69383431	69383431	C	G	intergenic	TMPRSS11E,UGT2B17	dist=20109;dist=19472	NA	NA	upstream	ENSG00000250566	NA	NA	NA	NA	NA	4q13.2	NA	NA	NA	NA	rs12503212	0.31	0.31	0.332	0.291933	0.2545	0.2192	0.4452	0.2526	0.3497	0.27	0.35	0.42	0.26	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.952486	NA	NA	NA	NA	NA	0.145	NA	3.2455
1327	4	143226784	143226784	G	A	intronic	INPP4B	NA	NA	NA	intronic	ENSG00000109452	NA	NA	NA	NA	NA	4q31.21	NA	NA	NA	NA	rs2636640	0.68	0.68	0.642	0.65016	0.7545	0.7123	0.7378	0.4992	0.6207	0.76	0.72	0.72	0.5	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.105097	NA	NA	NA	NA	NA	0.645	NA	3.2455
1327	19	54211903	54211903	T	G	upstream	MIR518C	NA	NA	NA	upstream	ENSG00000207553	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs7256241	0.47	0.47	0.472	0.492412	0.4215	0.4762	0.5014	0.5219	0.5358	0.42	0.44	0.5	0.57	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.831751	NA	NA	NA	NA	NA	0.435	NA	3.2451666
1328	6	70878156	70878156	A	G	intronic	COL19A1	NA	NA	NA	intronic	ENSG00000082293	NA	NA	NA	NA	NA	6q13	NA	NA	NA	NA	rs62421668	0.2	0.2	0.193	0.189297	0.2684	0.1875	0.1326	0.1127	0.2536	0.27	0.21	0.15	0.13	0.2315	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.425166	NA	NA	0.255116	0.14049	NA	0.094	NA	3.244984
1328	8	139668032	139668032	T	C	intronic	COL22A1	NA	NA	NA	intronic	ENSG00000169436	NA	NA	NA	NA	NA	8q24.23	NA	NA	NA	NA	rs11166832	0.56	0.56	0.519	0.504792	0.7555	0.7302	0.5504	0.0522	0.5941	0.75	0.69	0.58	0.08	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.202212	NA	NA	NA	NA	NA	0.399	NA	3.2445
1328	9	136081391	136081391	G	A	intronic	OBP2B	NA	NA	NA	intronic	ENSG00000171102	NA	NA	NA	NA	NA	9q34.2	NA	NA	NA	NA	rs6597608	0.66	0.66	0.64	0.610823	0.7555	0.5645	0.7262	0.5219	0.5481	0.75	0.55	0.75	0.55	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.222632	NA	NA	NA	NA	NA	0.232	NA	3.2445
1328	22	43625225	43625225	G	T	intronic	SCUBE1	NA	NA	NA	intronic	ENSG00000159307	NA	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs34045808	0.15	0.15	0.129	0.132388	0.2575	0.003	0.2709	0.0454	0.1564	0.25	0.0035	0.28	0.07	0.2253	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.661014	1.661014	NA	0.273023	0.077167	NA	0.254	NA	3.244177
1328	7	30544360	30544360	G	A	UTR5	GGCT	NM_024051:c.-35C>T,NM_001199815:c.-35C>T,NM_001199817:c.-35C>T,NM_001199816:c.-35C>T	NA	NA	UTR5	ENSG00000006625	ENST00000275428:c.-35C>T,ENST00000440082:c.-35C>T,ENST00000005374:c.-35C>T,ENST00000409144:c.-35C>T,ENST00000447901:c.-35C>T,ENST00000409390:c.-35C>T,ENST00000409436:c.-35C>T	NA	NA	NA	NA	7p14.3	NA	Name=YY1,STAT3,E2F1,Pol2-4H8,HA-E2F1,Sin3Ak-20,AP-2alpha,TBP,AP-2gamma,HEY1,ZBTB7A_(SC-34508),c-Myc,SETDB1,Pol2(phosphoS2),Pol2,Mxi1_(bHLH),NRSF,E2F6,TAF1,E2F6_(H-50),HMGN3,E2F4,Max,NF-YB	NA	NA	rs38414	0.62	0.62	0.622	0.61262	0.7028	0.6875	0.6239	0.4758	0.6196	0.7	0.61	0.65	0.48	0.6659	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.725593	NA	NA	0.720465	0.522242	NA	0.514	NA	3.2441684
1328	12	52369300	52369300	C	T	intronic	ACVR1B	NA	NA	NA	intronic	ENSG00000135503	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs2242106	0.3	0.3	0.261	0.29353	0.2316	0.3056	0.5461	0.2254	0.2577	0.22	0.34	0.52	0.2	0.2887	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.904261	2.904261	NA	0.23593	0.222424	NA	0.254	NA	3.24377
1328	4	4896934	4896934	A	G	intergenic	MSX1,CYTL1	dist=31274;dist=119380	NA	NA	upstream	ENSG00000251587	NA	NA	NA	NA	NA	4p16.2	NA	NA	NA	NA	rs16836365	0.33	0.33	0.287	0.282149	0.2565	0.5298	0.3386	0.1316	0.2168	0.27	0.56	0.34	0.14	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.494377	NA	NA	NA	NA	NA	0.232	NA	3.2435
1328	17	46055347	46055347	A	G	intronic	CDK5RAP3	NA	NA	NA	intronic	ENSG00000108465	NA	NA	NA	NA	NA	17q21.32	NA	NA	NA	NA	rs2875746	0.7	0.7	0.679	0.663139	0.7565	0.7847	0.6585	0.4818	0.6902	0.77	0.78	0.72	0.47	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.750399	NA	NA	NA	NA	NA	0.681	NA	3.2435
1328	1	150686633	150686633	A	T	intronic	HORMAD1	NA	NA	NA	intronic	ENSG00000143452	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs34593358	0.21	0.21	0.199	0.161941	0.2416	0.1885	0.2003	0.0809	0.135	0.26	0.24	0.21	0.09	0.2431	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.936972	2.936972	NA	0.272214	0.117417	ID=COSN163229;OCCURENCE=1(breast)	0.217	NA	3.243086
1328	15	45669055	45669055	C	A	intronic	GATM	NA	NA	NA	UTR5	ENSG00000171766	ENST00000559885:c.-7435G>T	NA	NA	NA	NA	15q21.1	NA	NA	NA	NA	rs12437840	0.46	0.46	0.435	0.443091	0.2753	0.8065	0.5202	0.3154	0.3589	0.27	0.85	0.46	0.28	0.3827	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.622544	NA	NA	0.265589	0.27889	NA	0.304	NA	3.2430777
1328	10	106124660	106124660	G	T	intronic	CCDC147	NA	NA	NA	intronic	ENSG00000120051	NA	NA	NA	NA	NA	10q25.1	NA	NA	NA	NA	rs12769756	0.16	0.16	0.156	0.142572	0.2674	0.0704	0.1715	0.059	0.181	0.25	0.08	0.2	0.06	0.2167	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.419209	NA	NA	0.273023	0.089197	NA	0.109	NA	3.242877
1328	2	91795675	91795675	A	G	intergenic	NONE,LOC654342	dist=NONE;dist=29034	NA	NA	ncRNA_intronic	ENSG00000233991	NA	NA	NA	NA	NA	2p11.1	NA	NA	NA	NA	rs4337515	NA	NA	0.79	0.790935	0.7575	0.6786	0.7104	0.9599	0.7699	NA	NA	NA	NA	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.780546	NA	NA	NA	NA	NA	0.783	NA	3.2425
1328	13	24334215	24334215	T	G	intronic	MIPEP	NA	NA	NA	intronic	ENSG00000027001	NA	NA	NA	NA	NA	13q12.12	NA	NA	NA	NA	rs11620036	0.14	0.14	0.127	0.125399	0.2734	0.001	0.1671	0.0734	0.1421	0.26	0.0017	0.18	0.06	0.2036	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.222991	NA	NA	0.280581	0.106219	NA	0.087	NA	3.242419
1328	12	101491375	101491375	G	A	intronic	ANO4	NA	NA	NA	intronic	ENSG00000151572	NA	NA	NA	NA	NA	12q23.1	NA	NA	NA	NA	rs1842888	0.46	0.46	0.466	0.497204	0.3668	0.3224	0.4813	0.7708	0.453	0.36	0.33	0.48	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.402279	1.402279	NA	0.390949	0.729769	NA	0.507	NA	3.242251
1328	6	29858218	29858218	A	G	ncRNA_exonic	HLA-H	NA	NA	NA	ncRNA_exonic	ENSG00000206341	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs3115602	0.69	0.69	0.676	0.674521	0.7247	0.5476	0.7522	0.7141	0.6452	0.71	0.55	0.71	0.79	0.6999	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.669691	NA	NA	NA	NA	NA	0.623	NA	3.2420666
1328	14	95110017	95110017	G	T	ncRNA_exonic	SERPINA13P	NA	NA	NA	ncRNA_exonic	ENSG00000187483	NA	NA	NA	NA	NA	14q32.13	NA	NA	NA	NA	rs1884084	0.32	0.32	0.273	0.272165	0.5119	0.2083	0.3501	0.1172	0.2454	0.51	0.21	0.35	0.11	0.4062	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.065839	NA	0.2	0.506512	0.177939	ID=COSN164780;OCCURENCE=1(breast)	0.261	NA	3.2420546
1328	12	49398862	49398862	G	A	intronic	PRKAG1	NA	NA	NA	ncRNA_intronic	ENSG00000257913	NA	NA	NA	NA	NA	12q13.12	NA	NA	NA	NA	rs2293445	0.35	0.35	0.352	0.372604	0.3489	0.4444	0.2767	0.3154	0.4683	0.35	0.41	0.28	0.31	0.3679	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.639148	NA	NA	0.374884	0.32887	NA	0.326	NA	3.2416493
1328	11	6243963	6243963	G	A	intronic	FAM160A2	NA	NA	NA	intronic	ENSG00000051009	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs3750947	0.71	0.71	0.695	0.694888	0.7584	0.9454	0.7695	0.3147	0.8323	0.76	0.95	0.79	0.32	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.369372	NA	NA	NA	NA	NA	0.717	NA	3.2416
1328	14	107183934	107183934	T	A	intergenic	LINC00221,NONE	dist=232405;dist=NONE	NA	NA	upstream	ENSG00000254056	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs10150044	0.32	0.32	0.288	0.373802	0.2584	0.2937	0.2767	0.4418	0.5521	0.26	0.31	0.31	0.42	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.234474	NA	NA	NA	NA	NA	0.464	NA	3.2416
1328	14	107183974	107183974	G	C	intergenic	LINC00221,NONE	dist=232445;dist=NONE	NA	NA	upstream	ENSG00000254056	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs10137980	0.32	0.32	0.298	0.374201	0.2584	0.2937	0.281	0.441	0.5521	0.26	0.31	0.31	0.42	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.813673	NA	NA	NA	NA	NA	0.428	NA	3.2416
1328	17	10543183	10543183	A	G	intronic	MYH3	NA	NA	NA	intronic	ENSG00000109063	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs2285471	0.5	0.5	0.485	0.466454	0.7584	0.3839	0.5346	0.2398	0.5092	0.74	0.37	0.52	0.27	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.547083	NA	NA	NA	NA	NA	0.616	NA	3.2416
1328	17	10555602	10555602	G	A	intronic	MYH3	NA	NA	NA	intronic	ENSG00000109063	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs2285463	0.5	0.5	0.496	0.46266	0.7584	0.369	0.5331	0.2375	0.5092	0.74	0.35	0.52	0.27	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.243662	NA	NA	NA	NA	NA	0.609	NA	3.2416
1328	19	41383344	41383344	T	C	intronic	CYP2A7	NA	NA	NA	intronic	ENSG00000198077,ENSG00000268797	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs2302988	0.77	0.77	0.749	0.761382	0.7584	0.6518	0.8026	0.8313	0.7536	0.76	0.67	0.83	0.86	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.801054	NA	NA	NA	NA	NA	0.804	NA	3.2416
1328	16	74662597	74662597	C	T	intronic	RFWD3	NA	NA	NA	intronic	ENSG00000168411	NA	NA	NA	NA	NA	16q23.1	NA	NA	NA	NA	rs11149759	0.32	0.32	0.3	0.376597	0.2326	0.372	0.428	0.3396	0.5429	0.23	0.4	0.38	0.32	0.3115	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.283554	2.283554	NA	0.214884	0.313694	NA	0.319	NA	3.241016
1328	17	80402296	80402296	G	A	intronic	C17orf62	NA	NA	NA	UTR3	ENSG00000178927	ENST00000578913:c.*23C>T	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs7221125	0.48	0.48	0.44	0.45627	0.2783	0.8522	0.536	0.3548	0.3119	0.26	0.87	0.51	0.33	0.3654	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.663476	NA	NA	0.281977	0.344303	NA	0.348	NA	3.2409897
1328	9	35641213	35641213	G	A	intergenic	CD72,SIT1	dist=22789;dist=8084	NA	NA	intergenic	ENSG00000137101,ENSG00000231393	dist=21674;dist=1298	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs55667103	0.04	0.04	0.034	0.0393371	0.0924	0.001	0.0476	0.0386	0.0194	0.08	NA	0.06	0.02	NA	0.08	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.818204	NA	NA	NA	NA	NA	0.072	NA	3.2409334
1328	6	29857410	29857410	T	C	ncRNA_intronic	HLA-H	NA	NA	NA	ncRNA_intronic	ENSG00000206341	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs3115606	0.68	0.68	0.671	0.674121	0.7237	0.5486	0.7493	0.7163	0.6421	0.71	0.54	0.7	0.78	0.7021	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.449924	NA	NA	NA	NA	NA	0.435	NA	3.2408666
1328	15	42135988	42135988	C	T	exonic	JMJD7-PLA2G4B,PLA2G4B	NA	synonymous SNV	PLA2G4B:NM_001114633:exon11:c.C858T:p.D286D,JMJD7-PLA2G4B:NM_001198588:exon16:c.C1551T:p.D517D,JMJD7-PLA2G4B:NM_005090:exon16:c.C1551T:p.D517D	exonic	ENSG00000168970,ENSG00000243708	NA	synonymous SNV	ENSG00000168970:ENST00000458483:exon11:c.C858T:p.D286D,ENSG00000243708:ENST00000452633:exon12:c.C858T:p.D286D,ENSG00000168970:ENST00000342159:exon16:c.C1551T:p.D517D,ENSG00000168970:ENST00000382448:exon16:c.C1551T:p.D517D	NA	NA	15q15.1	NA	NA	NA	NA	rs1672466	0.77	0.77	0.737	0.755391	0.8171	0.879	0.8228	0.5756	0.7597	0.82	0.87	0.81	0.53	0.7971	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.3235	NA	NA	0.81186	0.624376	NA	0.667	NA	3.2406066
1328	1	2420590	2420590	T	C	intronic	PLCH2	NA	NA	NA	intronic	ENSG00000149527	NA	NA	NA	NA	NA	1p36.32	NA	NA	NA	NA	rs10752744	0.85	0.85	0.857	0.86881	0.7594	0.9871	0.8343	0.916	0.82	0.74	0.99	0.81	0.88	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.183877	NA	NA	NA	NA	NA	0.63	NA	3.2406
1328	15	42851464	42851464	C	T	intronic	HAUS2	NA	NA	NA	intronic	ENSG00000137814	NA	NA	NA	NA	NA	15q15.2	NA	NA	NA	NA	rs11070374	0.58	0.58	0.478	0.514776	0.7594	0.7817	0.5115	0.0401	0.6319	0.77	0.79	0.57	0.06	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.353465	NA	NA	NA	NA	NA	0.507	NA	3.2406
1328	20	31294655	31294655	A	G	intronic	COMMD7	NA	NA	NA	intronic	ENSG00000149600	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs28548540	0.6	0.6	0.587	0.58766	0.7594	0.4841	0.4741	0.5113	0.7014	0.76	0.45	0.54	0.56	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.238961	NA	NA	NA	NA	NA	0.638	NA	3.2406
1328	1	231401204	231401204	T	C	intronic	GNPAT	NA	NA	NA	intronic	ENSG00000116906	NA	NA	NA	NA	NA	1q42.2	NA	NA	NA	NA	rs6702011	0.25	0.25	0.249	0.267772	0.2306	0.2411	0.3718	0.2738	0.2515	0.24	0.21	0.31	0.25	0.2712	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.23294	NA	NA	0.257791	0.294371	NA	0.268	NA	3.240409
1328	2	89417346	89417346	T	C	intergenic	MIR4436A,NONE	dist=305378;dist=NONE	NA	NA	upstream	ENSG00000240382	NA	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs111610161	0.12	0.12	0.129	0.154752	0.0855	0.0079	0.085	0.3903	0.1084	0.08	0.01	0.06	0.38	0.093	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.709161	NA	NA	0.081179	0.321503	NA	0.043	NA	3.240321
1328	22	20718692	20718692	G	A	intergenic	RIMBP3,ZNF74	dist=256906;dist=29713	NA	NA	intronic	ENSG00000161133	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs1807536	0.26	0.26	0.226	0.207468	0.4264	0.1587	0.2003	0.0439	0.2587	0.46	0.18	0.23	0.06	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.420222	NA	NA	NA	NA	NA	0.116	NA	3.2402667
1328	1	233490776	233490776	C	T	intronic	KIAA1804	NA	NA	NA	intronic	ENSG00000143674	NA	NA	NA	NA	NA	1q42.2	NA	NA	NA	NA	rs4649220	0.33	0.33	0.315	0.356829	0.2425	0.4018	0.4164	0.3752	0.3609	0.24	0.38	0.36	0.39	0.2895	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.522187	NA	NA	0.227791	0.341126	NA	0.333	NA	3.240209
1328	1	23419855	23419855	T	C	exonic	LUZP1	NA	synonymous SNV	LUZP1:NM_001142546:exon3:c.A900G:p.T300T,LUZP1:NM_033631:exon4:c.A900G:p.T300T	exonic	ENSG00000169641	NA	synonymous SNV	ENSG00000169641:ENST00000314174:exon2:c.A900G:p.T300T,ENSG00000169641:ENST00000374623:exon2:c.A900G:p.T300T,ENSG00000169641:ENST00000418342:exon3:c.A900G:p.T300T,ENSG00000169641:ENST00000302291:exon4:c.A900G:p.T300T	NA	NA	1p36.12	NA	NA	NA	NA	rs1983965	0.79	0.79	0.796	0.747404	0.828	0.8065	0.6225	0.8434	0.5624	0.83	0.79	0.64	0.83	0.7691	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.055617	NA	NA	0.829535	0.821834	NA	0.862	NA	3.2400316
1328	8	21900757	21900757	A	G	intronic	FGF17	NA	NA	NA	intronic	ENSG00000158815	NA	NA	NA	NA	NA	8p21.3	NA	NA	NA	NA	rs900779	0.49	0.49	0.444	0.508187	0.3996	0.6349	0.3458	0.6074	0.4703	0.41	0.62	0.35	0.58	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.669737	NA	NA	0.360465	0.54841	NA	0.5	NA	3.239935
1328	11	113285299	113285299	G	A	intronic	DRD2	NA	NA	NA	intronic	ENSG00000149295	NA	NA	NA	NA	NA	11q23.2	NA	NA	NA	NA	rs2511521	0.53	0.53	0.514	0.503195	0.7604	0.4792	0.6369	0.1755	0.6115	0.74	0.46	0.66	0.2	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.207314	NA	NA	NA	NA	NA	0.428	NA	3.2396
1328	17	10536184	10536184	A	G	intronic	MYH3	NA	NA	NA	intronic	ENSG00000109063	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs2285478	0.51	0.51	0.492	0.469449	0.7604	0.3849	0.536	0.2466	0.5112	0.75	0.37	0.52	0.27	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.994519	NA	NA	NA	NA	NA	0.616	NA	3.2396
1328	13	113907391	113907391	A	G	intronic	CUL4A	NA	NA	NA	intronic	ENSG00000139842	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs9549365	0.3	0.3	0.267	0.3125	0.2346	0.5456	0.3862	0.0461	0.4601	0.24	0.53	0.36	0.08	0.2943	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.371461	NA	NA	0.231512	0.080118	NA	0.239	NA	3.239588
1328	15	43024063	43024063	C	T	intronic	CDAN1	NA	NA	NA	intronic	ENSG00000140326	NA	NA	NA	NA	NA	15q15.2	NA	NA	NA	NA	rs12917018	0.4	0.4	0.45	0.461262	0.2346	0.256	0.1888	0.9554	0.4315	0.24	0.25	0.2	0.95	0.3014	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.407762	1.407762	NA	0.224552	0.819444	NA	0.435	NA	3.239448
1328	15	27890359	27890359	T	C	intergenic	GABRG3,OCA2	dist=111986;dist=109664	NA	NA	intergenic	ENSG00000258594,ENSG00000258853	dist=15924;dist=39285	NA	NA	NA	NA	15q12	NA	NA	NA	NA	rs1841875	0.11	0.11	0.097	0.107428	0.0944	0.0536	0.1153	0.1974	0.0491	0.09	0.04	0.14	0.18	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.190689	NA	NA	NA	NA	NA	0.167	NA	3.2389334
1328	3	156876803	156876803	T	G	intronic	CCNL1	NA	NA	NA	intronic	ENSG00000163660	NA	NA	NA	NA	NA	3q25.31	NA	NA	NA	NA	rs6441116	0.27	0.27	0.228	0.241813	0.2584	0.3333	0.4784	0.0787	0.183	0.25	0.36	0.43	0.08	0.2586	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.889825	NA	NA	0.24407	0.116205	ID=COSN167056;OCCURENCE=1(large_intestine)	0.174	NA	3.23893
1328	7	2632477	2632477	A	G	intronic	IQCE	NA	NA	NA	intronic	ENSG00000106012	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs2917730	0.71	0.71	0.695	0.727436	0.7614	0.4643	0.7176	0.9062	0.729	0.77	0.47	0.71	0.88	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.622089	NA	NA	NA	NA	NA	0.71	NA	3.2386
1328	17	78081982	78081982	G	A	intronic	GAA	NA	NA	NA	intronic	ENSG00000171298	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs2241888	0.69	0.69	0.712	0.71246	0.7614	0.6498	0.5634	0.7126	0.8323	0.76	0.67	0.57	0.7	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.495922	NA	NA	NA	NA	NA	0.725	NA	3.2386
1328	14	20846521	20846521	A	T	intronic	TEP1	NA	NA	NA	intronic	ENSG00000129566	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs2297615	0.25	0.25	0.252	0.261581	0.2475	0.1905	0.2118	0.3336	0.2873	0.25	0.2	0.2	0.32	0.2552	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.644774	NA	NA	0.25907	0.329097	NA	0.261	NA	3.23823
1328	5	178567054	178567054	A	G	intronic	ADAMTS2	NA	NA	NA	intronic	ENSG00000087116	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs2303638	0.22	0.22	0.194	0.237021	0.2505	0.3294	0.2968	0.0461	0.3436	0.25	0.33	0.26	0.04	0.2617	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.108515	NA	NA	0.249884	0.079891	ID=COSN167667;OCCURENCE=1(large_intestine)	0.152	NA	3.237916
1328	9	132854482	132854482	T	C	intronic	GPR107	NA	NA	NA	intronic	ENSG00000148358	NA	NA	NA	NA	NA	9q34.11	NA	NA	NA	NA	rs10988589	0.18	0.18	0.202	0.174321	0.2624	0.0367	0.1772	0.1989	0.1902	0.27	0.05	0.16	0.23	0.2308	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.330468	NA	NA	0.26907	0.201316	NA	0.232	NA	3.23773
1328	9	35100468	35100468	T	C	intronic	STOML2	NA	NA	NA	intronic	ENSG00000165283	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs666549	0.68	0.68	0.651	0.670527	0.7624	0.4603	0.8228	0.6286	0.7413	0.78	0.5	0.81	0.64	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.154916	NA	NA	NA	NA	NA	0.768	NA	3.2376
1328	8	23160778	23160778	C	G	intronic	LOXL2	NA	NA	NA	intronic	ENSG00000134013	NA	NA	NA	NA	NA	8p21.3	NA	NA	NA	NA	rs3765215	0.22	0.22	0.208	0.178115	0.2575	0.256	0.2305	0.0885	0.1002	0.26	0.26	0.23	0.09	0.2309	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.404544	NA	NA	0.274186	0.125511	NA	0.239	NA	3.237414
1328	11	2016924	2016924	A	G	ncRNA_exonic	H19	NA	NA	NA	ncRNA_exonic	ENSG00000130600	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs10840159	0.35	0.35	0.318	0.291334	0.5	0.3323	0.4135	0.0552	0.2669	0.52	0.33	0.41	0.07	0.4183	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.914035	NA	NA	0.511307	0.121143	NA	0.312	NA	3.2370596
1328	1	109737314	109737314	T	C	intronic	KIAA1324	NA	NA	NA	intronic	ENSG00000116299	NA	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	rs2359242	0.74	0.74	0.7	0.715855	0.7634	0.998	0.7939	0.2912	0.8947	0.78	1	0.79	0.32	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000284	NA	NA	NA	NA	NA	0.754	NA	3.2366
1328	1	109737320	109737320	G	A	intronic	KIAA1324	NA	NA	NA	intronic	ENSG00000116299	NA	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	rs2359241	0.73	0.73	0.693	0.715655	0.7634	0.998	0.7939	0.2905	0.8947	0.78	1	0.79	0.31	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.399545	NA	NA	NA	NA	NA	0.754	NA	3.2366
1328	3	88368227	88368227	C	A	intergenic	C3orf38,EPHA3	dist=161112;dist=788447	NA	NA	downstream	ENSG00000242159	NA	NA	NA	NA	NA	3p11.1	NA	NA	NA	NA	rs57261905	0.29	0.29	0.297	0.285144	0.2634	0.3998	0.1974	0.2723	0.2689	0.26	0.39	0.23	0.26	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.097982	NA	NA	NA	NA	NA	0.275	NA	3.2366
1328	20	47859015	47859015	A	G	intronic	DDX27	NA	NA	NA	intronic	ENSG00000124201,ENSG00000124228	NA	NA	NA	NA	NA	20q13.13	NA	NA	NA	NA	rs238204	0.64	0.64	0.618	0.60004	0.7634	0.5288	0.6412	0.5053	0.6043	0.75	0.52	0.67	0.59	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.240638	NA	NA	NA	NA	NA	0.616	NA	3.2366
1328	19	7166138	7166138	G	A	intronic	INSR	NA	NA	NA	intronic	ENSG00000171105	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs3815902	0.21	0.21	0.209	0.204273	0.2843	0.2312	0.2334	0.1059	0.2065	0.29	0.18	0.23	0.09	0.2392	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.165705	NA	NA	0.240814	0.126419	ID=COSN165703;OCCURENCE=1(breast)	0.145	NA	3.235686
1328	20	31656837	31656837	G	A	intronic	BPIFB3	NA	NA	NA	intronic	ENSG00000186190	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs2424938	0.84	0.84	0.837	0.842851	0.7644	0.9742	0.8761	0.7905	0.8354	0.77	0.99	0.86	0.75	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.88815	NA	NA	NA	NA	NA	0.732	NA	3.2356
1328	14	107211211	107211211	G	A	intergenic	LINC00221,NONE	dist=259682;dist=NONE	NA	NA	exonic	ENSG00000211976	NA	synonymous SNV	ENSG00000211976:ENST00000390636:exon2:c.C78T:p.S26S	NA	NA	14q32.33	NA	NA	NA	NA	rs2073668	0.45	0.45	0.456	0.506989	0.4076	0.5079	0.415	0.4902	0.6963	0.4	0.47	0.43	0.52	0.4593	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.26744	NA	NA	0.397595	0.450738	NA	0.536	NA	3.235505
1328	19	19756662	19756662	T	C	intronic	ATP13A1	NA	NA	NA	intronic	ENSG00000105726	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs10405234	0.26	0.26	0.274	0.293331	0.2386	0.1776	0.2464	0.4561	0.2822	0.23	0.17	0.26	0.42	0.2658	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.845194	NA	NA	0.260233	0.44621	NA	0.29	NA	3.235367
1328	19	19431963	19431963	G	T	intronic	MAU2	NA	NA	NA	UTR5	ENSG00000105705	ENST00000586132:c.-4608C>A	NA	NA	NA	NA	19p13.11	NA	NA	Name=6	NA	rs12460764	0.58	0.58	0.583	0.53135	0.673	0.6756	0.5432	0.3495	0.4744	0.68	0.67	0.56	0.33	0.6068	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.02473	4.02473	NA	0.651511	0.386846	NA	0.478	NA	3.2353557
1329	19	20166615	20166615	A	C	intergenic	ZNF682,ZNF90	dist=16338;dist=22188	NA	NA	intergenic	ENSG00000197124,ENSG00000269154	dist=16300;dist=6949	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs117287817	0.04	0.04	0.04	0.0383387	0.0984	NA	0.0432	0.003	0.0603	0.1	NA	0.05	NA	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.690666	NA	NA	NA	NA	NA	0.007	NA	3.2349334
1329	2	214174767	214174767	C	T	intronic	SPAG16	NA	NA	NA	intronic	ENSG00000144451	NA	NA	NA	NA	NA	2q34	NA	NA	NA	NA	rs10498003	0.14	0.14	0.132	0.108227	0.2575	0.002	0.183	0.0582	0.0787	0.25	0.0035	0.21	0.08	0.2091	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.016892	NA	NA	0.298511	0.078529	NA	0.261	NA	3.234889
1329	1	24083649	24083649	T	C	intronic	TCEB3	NA	NA	NA	intronic	ENSG00000011007	NA	NA	NA	NA	NA	1p36.11	NA	NA	NA	NA	rs2076346	0.28	0.28	0.284	0.292931	0.2575	0.5169	0.2133	0.0885	0.4315	0.25	0.55	0.19	0.09	0.2709	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.088922	NA	NA	0.236744	0.129596	NA	0.37	NA	3.234856
1329	17	10432638	10432638	T	C	intronic	MYH2	NA	NA	NA	ncRNA_intronic	ENSG00000214970	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs2277651	0.45	0.45	0.437	0.449081	0.333	0.8016	0.4755	0.2262	0.4877	0.32	0.82	0.47	0.22	0.4196	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.005235	NA	NA	0.346512	0.252156	NA	0.457	NA	3.2342213
1329	7	150647969	150647969	C	T	intronic	KCNH2	NA	NA	NA	intronic	ENSG00000055118	NA	NA	NA	NA	NA	7q36.1	NA	NA	NA	NA	rs2072413	0.22	0.22	0.213	0.273762	0.2942	0.1379	0.2089	0.3828	0.2914	0.25	0.08	0.23	0.31	0.2438	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.997187	NA	NA	0.22814	0.314798	NA	NA	NA	3.23386
1329	6	7571874	7571874	G	A	intronic	DSP	NA	NA	NA	intronic	ENSG00000096696	NA	NA	NA	NA	NA	6p24.3	NA	NA	NA	NA	rs926411	0.83	0.83	0.856	0.819688	0.7664	0.8036	0.7983	0.9902	0.6759	0.75	0.84	0.78	0.98	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.265769	NA	NA	NA	NA	NA	0.841	NA	3.2336
1329	8	10470915	10470915	A	G	intronic	RP1L1	NA	NA	NA	intronic	ENSG00000183638	NA	NA	NA	NA	NA	8p23.1	NA	NA	NA	NA	rs11773913	0.58	0.58	0.552	0.525359	0.7664	0.4345	0.683	0.3797	0.456	0.77	0.45	0.66	0.38	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.32261	NA	NA	NA	NA	NA	0.594	NA	3.2336
1329	14	22279576	22279576	C	T	intergenic	OR4E2,DAD1	dist=145338;dist=754231	NA	NA	upstream	ENSG00000211783	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs10138170	0.17	0.17	0.15	0.136581	0.2664	0.0675	0.1441	0.0893	0.1329	0.26	0.08	0.19	0.1	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.725101	NA	NA	NA	NA	NA	0.13	NA	3.2336
1329	1	57258485	57258485	A	G	intronic	C1orf168	NA	NA	NA	intronic	ENSG00000187889	NA	NA	NA	NA	NA	1p32.2	NA	NA	NA	NA	rs1935553	0.29	0.29	0.296	0.274361	0.2525	0.3095	0.2839	0.3018	0.2168	0.25	0.33	0.28	0.31	0.2725	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.189753	NA	NA	0.241822	0.291515	NA	0.355	NA	3.233178
1329	19	54245706	54245706	G	C	upstream	MIR520H	NA	NA	NA	upstream	ENSG00000207861	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs61217982	0.26	0.26	0.266	0.264177	0.2396	0.1548	0.1499	0.4516	0.2301	0.25	0.15	0.16	0.49	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.363356	NA	NA	0.193903	0.413295	ID=COSN165942;OCCURENCE=1(breast)	0.37	NA	3.2331636
1329	4	76817412	76817412	G	A	intronic	PPEF2	NA	NA	NA	intronic	ENSG00000156194	NA	NA	NA	NA	NA	4q21.1	NA	NA	NA	NA	rs11731367	0.16	0.16	0.163	0.144569	0.2823	0.0139	0.1455	0.1467	0.1339	0.28	0.02	0.17	0.14	0.2146	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.176085	NA	NA	0.270349	0.153427	NA	0.174	NA	3.232751
1329	6	114265587	114265587	T	C	intronic	HDAC2	NA	NA	NA	intronic	ENSG00000196591	NA	NA	NA	NA	NA	6q21	NA	NA	NA	NA	rs13204445	0.22	0.22	0.211	0.217652	0.2614	0.2927	0.1686	0.1051	0.2822	0.25	0.31	0.19	0.1	0.2389	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.697304	NA	NA	0.267001	0.143675	NA	0.283	NA	3.232699
1329	2	216295312	216295312	T	A	intronic	FN1	NA	NA	NA	intronic	ENSG00000115414	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs1250241	0.85	0.85	0.849	0.794928	0.7674	0.9256	0.7954	0.9017	0.544	0.78	0.95	0.81	0.88	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.749645	NA	NA	NA	NA	NA	0.819	NA	3.2326
1329	12	464254	464254	T	C	intronic	KDM5A	NA	NA	NA	intronic	ENSG00000073614	NA	NA	NA	NA	NA	12p13.33	NA	NA	NA	NA	rs3759371	0.65	0.65	0.656	0.647963	0.7674	0.4931	0.6801	0.6687	0.6339	0.76	0.5	0.68	0.64	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.467156	1.467156	NA	NA	NA	NA	0.717	NA	3.2326
1329	11	118852137	118852137	C	T	downstream	FOXR1	NA	NA	NA	downstream	ENSG00000176302	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs4936451	0.35	0.35	0.336	0.367412	0.4344	0.1171	0.5908	0.3533	0.4172	0.42	0.11	0.56	0.39	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.202903	NA	NA	NA	NA	NA	0.42	NA	3.2322666
1329	17	33687416	33687416	C	T	intronic	SLFN11	NA	NA	NA	intronic	ENSG00000172716	NA	NA	NA	NA	NA	17q12	NA	NA	NA	NA	rs938298	0.42	0.42	0.423	0.455671	0.2256	0.4812	0.4179	0.6846	0.3834	0.23	0.47	0.38	0.68	0.3218	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.601021	NA	NA	0.220465	0.593055	NA	0.399	NA	3.232135
1329	21	47417415	47417415	C	A	intronic	COL6A1	NA	NA	NA	intronic	ENSG00000142156	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs2276254	0.63	0.63	0.671	0.610024	0.6044	0.7639	0.6686	0.4955	0.5706	0.6	0.77	0.66	0.5	0.5994	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.25547	NA	NA	0.564201	0.499773	NA	0.551	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000079752.1;CLNDSDB=.;CLNDSDBID=.	3.231999
1329	18	4691592	4691592	C	T	intergenic	DLGAP1,C18orf42	dist=236326;dist=452080	NA	NA	intergenic	ENSG00000265545,ENSG00000266268	dist=232134;dist=83461	NA	NA	NA	NA	18p11.31	NA	NA	NA	NA	rs4433903	0.09	0.09	0.072	0.0840655	0.1014	0.1062	0.0476	0.0779	0.0777	0.1	0.1	0.05	0.07	NA	0.1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.292889	NA	NA	NA	NA	NA	0.058	NA	3.2319334
1329	1	115161140	115161140	C	T	intronic	DENND2C	NA	NA	NA	intronic	ENSG00000175984	NA	NA	NA	NA	NA	1p13.2	NA	NA	NA	NA	rs12145066	0.13	0.13	0.125	0.114816	0.2883	0.002	0.1455	0.0182	0.1616	0.29	NA	0.18	0.02	0.2033	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.414623	NA	NA	0.276497	0.062216	NA	0.167	NA	3.231903
1329	1	228407010	228407010	C	T	intronic	OBSCN	NA	NA	NA	intronic	ENSG00000154358	NA	NA	NA	NA	NA	1q42.13	NA	NA	NA	NA	rs1757158	0.3	0.3	0.281	0.285343	0.3579	0.1756	0.3545	0.3427	0.1973	0.36	0.17	0.38	0.3	0.4103	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.12418	NA	NA	NA	NA	NA	0.348	NA	3.2318
1329	2	24276736	24276736	T	C	intronic	FKBP1B	NA	NA	NA	intronic	ENSG00000119782,ENSG00000205639	NA	NA	NA	NA	NA	2p23.3	NA	NA	NA	NA	rs11125393	0.23	0.23	0.228	0.252396	0.2475	0.0456	0.1744	0.4455	0.2648	0.25	0.04	0.21	0.44	0.2482	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.369967	NA	NA	0.272674	0.438039	NA	0.261	NA	3.231626
1329	2	128757804	128757804	C	T	intronic	SAP130	NA	NA	NA	intronic	ENSG00000136715	NA	NA	NA	NA	NA	2q14.3	NA	NA	NA	NA	rs10928793	0.8	0.8	0.795	0.776158	0.7684	0.8532	0.7997	0.7587	0.7117	0.78	0.85	0.8	0.76	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.032188	NA	NA	NA	NA	NA	0.645	NA	3.2316
1329	10	135352168	135352168	T	C	intronic	CYP2E1	NA	NA	NA	intronic	ENSG00000130649,ENSG00000203772	NA	NA	NA	NA	NA	10q26.3	NA	NA	NA	NA	rs2249695	0.6	0.6	0.538	0.554513	0.7684	0.5575	0.745	0.2398	0.6217	0.77	0.57	0.73	0.27	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.334975	NA	NA	NA	NA	NA	0.543	NA	3.2316
1329	21	45825975	45825975	G	A	intronic	TRPM2	NA	NA	NA	intronic	ENSG00000142185	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs1614122	0.71	0.71	0.688	0.679712	0.7684	0.7649	0.7392	0.5461	0.6391	0.76	0.76	0.75	0.55	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.597171	NA	NA	NA	NA	NA	0.551	NA	3.2316
1329	7	131815220	131815220	G	A	UTR3	PLXNA4	NM_020911:c.*18C>T	NA	NA	UTR3	ENSG00000221866	ENST00000321063:c.*18C>T,ENST00000359827:c.*18C>T	NA	NA	NA	NA	7q32.3	Score=788;Name=V$SRF_C	NA	NA	NA	rs10954360	0.6	0.6	0.546	0.534944	0.7177	0.8323	0.5548	0.0832	0.637	0.73	0.83	0.62	0.1	0.6649	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.456513	NA	NA	0.719524	0.207182	NA	0.543	NA	3.2312094
1329	11	280673	280673	C	T	exonic	NLRP6	NA	synonymous SNV	NLRP6:NM_001276700:exon4:c.C939T:p.S313S,NLRP6:NM_138329:exon4:c.C939T:p.S313S	exonic	ENSG00000174885	NA	synonymous SNV	ENSG00000174885:ENST00000312165:exon4:c.C939T:p.S313S,ENSG00000174885:ENST00000534750:exon4:c.C939T:p.S313S	NA	NA	11p15.5	NA	NA	NA	NA	rs12807092	0.52	0.52	0.521	0.48742	0.8032	0.2579	0.7363	0.2209	0.5828	0.81	0.24	0.73	0.25	0.7741	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.384213	NA	NA	0.858228	0.527817	NA	0.043	NA	3.2311386
1329	1	11134157	11134157	T	G	intronic	EXOSC10	NA	NA	NA	intronic	ENSG00000171824	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs2748876	0.76	0.76	0.724	0.761981	0.7694	0.9415	0.8415	0.4977	0.8701	0.77	0.93	0.84	0.5	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.659905	NA	NA	NA	NA	NA	0.768	NA	3.2306
1329	1	89520636	89520636	G	A	intronic	GBP1	NA	NA	NA	intronic	ENSG00000117228	NA	NA	NA	NA	NA	1p22.2	NA	NA	NA	NA	rs10922555	0.7	0.7	0.655	0.717053	0.7694	0.5585	0.6153	0.789	0.8016	0.77	0.54	0.68	0.78	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.317889	NA	NA	NA	NA	NA	0.717	NA	3.2306
1329	1	89520643	89520643	C	T	intronic	GBP1	NA	NA	NA	intronic	ENSG00000117228	NA	NA	NA	NA	NA	1p22.2	NA	NA	NA	NA	rs10922556	0.69	0.69	0.69	0.717053	0.7694	0.5585	0.6153	0.789	0.8016	0.76	0.54	0.68	0.77	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.691993	NA	NA	NA	NA	NA	0.717	NA	3.2306
1329	1	247597258	247597258	G	C	intronic	NLRP3	NA	NA	NA	intronic	ENSG00000162711	NA	NA	NA	NA	NA	1q44	NA	NA	NA	NA	rs10802498	0.63	0.63	0.694	0.735423	0.7694	0.9881	0.7233	0.5	0.7669	0.64	0.71	0.64	0.52	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.179765	NA	NA	NA	NA	NA	0.029	NA	3.2306
1329	3	194349027	194349027	A	G	intronic	TMEM44	NA	NA	NA	intronic	ENSG00000145014	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs1318216	0.65	0.65	0.636	0.626997	0.7694	0.5685	0.5807	0.5779	0.6401	0.77	0.56	0.63	0.59	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.088671	NA	NA	NA	NA	NA	0.667	NA	3.2306
1329	11	6016310	6016310	C	T	intergenic	OR52L1,OR56A4	dist=8095;dist=6971	NA	NA	upstream	ENSG00000254831	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs11603617	0.16	0.16	0.172	0.161941	0.2694	0.0794	0.1931	0.0598	0.2526	0.27	0.08	0.19	0.07	NA	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.792541	NA	NA	NA	NA	NA	0.101	NA	3.2306
1329	17	25969440	25969440	A	G	intronic	LGALS9	NA	NA	NA	intronic	ENSG00000168961	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs3094268	0.86	0.86	0.848	0.917532	0.7694	0.9732	0.8703	0.9879	0.9509	0.74	0.94	0.85	0.96	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.245054	NA	NA	NA	NA	NA	0.899	NA	3.2306
1329	21	45834025	45834025	T	C	intronic	TRPM2	NA	NA	NA	intronic	ENSG00000142185	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs915779	0.72	0.72	0.7	0.689896	0.7694	0.7629	0.7435	0.5825	0.6401	0.77	0.76	0.76	0.59	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.649468	NA	NA	NA	NA	NA	0.355	NA	3.2306
1329	14	71050892	71050892	A	G	downstream	MED6	NA	NA	NA	UTR3	ENSG00000133997	ENST00000256379:c.*638T>C,ENST00000430055:c.*638T>C	NA	NA	NA	NA	14q24.2	NA	NA	NA	NA	rs11158867	0.44	0.44	0.498	0.44389	0.2485	0.5645	0.2594	0.7126	0.2883	0.24	0.56	0.28	0.73	0.293	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.01798	NA	NA	0.228255	0.631157	NA	0.478	NA	3.230245
1329	19	45774680	45774680	A	G	intronic	MARK4	NA	NA	NA	intronic	ENSG00000007047	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs12984234	0.18	0.18	0.146	0.145966	0.2674	0.1012	0.1484	0.087	0.1452	0.28	0.1	0.2	0.08	0.2171	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.613331	NA	NA	0.285349	0.125511	NA	0.094	NA	3.230151
1329	3	156983273	156983273	A	G	intronic	VEPH1	NA	NA	NA	ncRNA_intronic	ENSG00000243176	NA	NA	NA	NA	NA	3q25.31	NA	NA	NA	NA	rs3749214	0.48	0.48	0.453	0.463658	0.3549	0.5476	0.6196	0.4554	0.3896	0.34	0.59	0.57	0.49	0.4141	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.474272	1.474272	NA	0.334186	0.431911	NA	0.37	NA	3.2301473
1329	1	94549083	94549083	T	C	intronic	ABCA4	NA	NA	NA	intronic	ENSG00000198691	NA	NA	NA	NA	NA	1p22.1	NA	NA	NA	NA	rs574741	0.78	0.78	0.776	0.745407	0.7704	0.8651	0.7939	0.6422	0.7014	0.76	0.86	0.79	0.69	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.580195	3.580195	NA	NA	NA	NA	0.732	NA	3.2296
1329	15	63351687	63351687	A	G	intronic	TPM1	NA	NA	NA	intronic	ENSG00000140416	NA	NA	NA	NA	NA	15q22.2	NA	NA	NA	NA	rs4775614	0.83	0.83	0.823	0.861422	0.7704	0.996	0.8646	0.8124	0.8804	0.77	1	0.84	0.75	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.486025	NA	NA	NA	NA	NA	0.768	NA	3.2296
1329	16	10631985	10631985	T	C	intronic	EMP2	NA	NA	NA	intronic	ENSG00000213853	NA	NA	NA	NA	NA	16p13.13	NA	NA	NA	NA	rs1504884	0.81	0.81	0.793	0.823482	0.7704	0.8313	0.7882	0.8555	0.8517	0.78	0.82	0.75	0.87	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.508371	NA	NA	NA	NA	NA	0.768	NA	3.2296
1329	21	46066319	46066319	A	T	intronic	TSPEAR	NA	NA	NA	intronic	ENSG00000175894	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs2329837	0.77	0.77	0.761	0.783946	0.7704	0.6558	0.7507	0.9213	0.7679	0.77	0.63	0.78	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.4267	NA	NA	NA	NA	NA	0.536	NA	3.2296
1329	9	133510021	133510021	T	C	intronic	FUBP3	NA	NA	NA	intronic	ENSG00000107164	NA	NA	NA	NA	NA	9q34.12	NA	NA	NA	NA	rs2304808	0.38	0.38	0.364	0.418331	0.2197	0.3363	0.3314	0.7095	0.3753	0.21	0.4	0.3	0.67	0.3207	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.067601	NA	NA	0.23013	0.61999	NA	0.384	NA	3.22947
1329	8	120940867	120940867	G	A	intronic	DEPTOR	NA	NA	NA	intronic	ENSG00000155792	NA	NA	NA	NA	NA	8q24.12	NA	NA	NA	NA	rs28461628	0.21	0.21	0.206	0.249002	0.2416	0.0367	0.1873	0.3797	0.3425	0.24	0.02	0.22	0.38	0.2653	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.748207	NA	NA	0.263837	0.359737	NA	0.399	NA	3.229263
1329	7	150647970	150647970	C	G	intronic	KCNH2	NA	NA	NA	intronic	ENSG00000055118	NA	NA	NA	NA	NA	7q36.1	NA	NA	NA	NA	rs2072412	0.22	0.22	0.213	0.273762	0.2942	0.1379	0.2089	0.3828	0.2914	0.25	0.08	0.23	0.31	0.2443	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.996544	NA	NA	0.232442	0.31616	NA	NA	NA	3.229058
1329	5	44164087	44164087	G	A	intergenic	NNT,FGF10	dist=458419;dist=141010	NA	NA	intergenic	ENSG00000212561,ENSG00000070193	dist=97254;dist=139559	NA	NA	NA	NA	5p12	NA	NA	NA	NA	rs4866874	0.12	0.12	0.093	0.0884585	0.1044	0.1915	0.1787	0.0068	0.0123	0.11	0.2	0.17	0.01	NA	0.2	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.139767	NA	NA	NA	NA	NA	0.196	NA	3.2289334
1329	2	37292890	37292890	T	G	intronic	HEATR5B	NA	NA	NA	intronic	ENSG00000008869	NA	NA	NA	NA	NA	2p22.2	NA	NA	NA	NA	rs11903252	0.26	0.26	0.214	0.281949	0.2435	0.3313	0.4049	0.1256	0.3947	0.25	0.31	0.4	0.11	0.2848	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.863879	NA	NA	0.242791	0.139582	NA	0.333	NA	3.228909
1329	2	29136653	29136653	T	C	intronic	WDR43	NA	NA	NA	intronic	ENSG00000163811	NA	NA	NA	NA	NA	2p23.2	NA	NA	NA	NA	rs4666134	0.39	0.39	0.349	0.370208	0.2237	0.7907	0.4524	0.171	0.2986	0.23	0.78	0.41	0.19	0.3193	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.097615	NA	NA	0.228277	0.197489	NA	0.355	NA	3.228723
1329	1	21805978	21805978	G	A	intronic	NBPF3	NA	NA	NA	intronic	ENSG00000142794	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs4654948	0.74	0.74	0.724	0.749201	0.7714	0.8125	0.7925	0.5363	0.9182	0.77	0.78	0.82	0.57	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.33668	NA	NA	NA	NA	NA	0.703	NA	3.2286
1329	1	55546895	55546895	T	C	intronic	USP24	NA	NA	NA	intronic	ENSG00000162402	NA	NA	NA	NA	NA	1p32.3	NA	NA	NA	NA	rs683880	0.7	0.7	0.668	0.691494	0.7714	0.9196	0.8473	0.2625	0.8436	0.76	0.9	0.82	0.3	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.355553	NA	NA	NA	NA	NA	0.667	NA	3.2286
1329	13	28607916	28607916	T	A	intronic	FLT3	NA	NA	NA	intronic	ENSG00000122025	NA	NA	NA	NA	NA	13q12.2	NA	NA	NA	NA	rs2491222	0.63	0.63	0.587	0.570687	0.7714	0.7302	0.719	0.23	0.5552	0.78	0.7	0.7	0.24	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.522264	NA	NA	NA	NA	NA	0.522	NA	3.2286
1329	13	28609991	28609991	T	C	intronic	FLT3	NA	NA	NA	intronic	ENSG00000122025	NA	NA	NA	NA	NA	13q12.2	NA	NA	NA	NA	rs2491229	0.62	0.62	0.566	0.563099	0.7714	0.7351	0.7161	0.1944	0.5613	0.78	0.7	0.7	0.21	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.93191	NA	NA	NA	NA	NA	0.507	NA	3.2286
1329	13	28609997	28609997	T	C	intronic	FLT3	NA	NA	NA	intronic	ENSG00000122025	NA	NA	NA	NA	NA	13q12.2	NA	NA	NA	NA	rs2491230	0.62	0.62	0.571	0.563099	0.7714	0.7351	0.7161	0.1944	0.5613	0.78	0.7	0.7	0.21	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.572397	NA	NA	NA	NA	NA	0.507	NA	3.2286
1329	1	202887295	202887295	G	A	intronic	KLHL12	NA	NA	NA	intronic	ENSG00000117153	NA	NA	NA	NA	NA	1q32.1	Score=921;Name=V$AREB6_01	NA	NA	NA	rs2275734	0.47	0.47	0.444	0.438299	0.6153	0.3085	0.5058	0.3949	0.4008	0.63	0.31	0.5	0.37	0.5435	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.179263	NA	NA	0.612907	0.412846	ID=COSM146736;OCCURENCE=1(stomach)	0.42	NA	3.228293
1329	10	72468584	72468584	C	G	intronic	ADAMTS14	NA	NA	NA	intronic	ENSG00000138316	NA	NA	NA	NA	NA	10q22.1	NA	NA	NA	NA	rs117280157	0.13	0.13	0.101	0.135982	0.2664	0.004	0.1326	0.0416	0.2679	0.26	0.01	0.16	0.05	0.229	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.506031	NA	NA	0.27642	0.072207	NA	0.043	NA	3.22818
1329	14	106366544	106366544	G	A	intergenic	ELK2AP,KIAA0125	dist=227400;dist=17294	NA	NA	upstream;downstream	ENSG00000227108;ENSG00000211920	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs112989444	0.15	0.15	0.03	0.173922	0.0706	0.2044	0.134	0.2958	0.1125	0.06	0.16	0.14	0.27	0.1212	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.825031	NA	NA	0.080455	0.25176	NA	0.022	NA	3.227745
1329	1	21800185	21800185	T	G	intronic	NBPF3	NA	NA	NA	intronic	ENSG00000142794	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs7520015	0.74	0.74	0.716	0.749601	0.7724	0.8125	0.7925	0.5371	0.9182	0.77	0.78	0.82	0.57	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.947568	NA	NA	NA	NA	NA	0.717	NA	3.2276
1329	1	21805730	21805730	A	G	intronic	NBPF3	NA	NA	NA	intronic	ENSG00000142794	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs2316504	0.74	0.74	0.724	0.7498	0.7724	0.8135	0.7925	0.5371	0.9182	0.77	0.79	0.82	0.57	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.340775	NA	NA	NA	NA	NA	0.725	NA	3.2276
1329	17	61729882	61729882	A	G	intronic	MAP3K3	NA	NA	NA	intronic	ENSG00000198909	NA	NA	NA	NA	NA	17q23.3	NA	NA	NA	NA	rs8080211	0.17	0.17	0.163	0.15595	0.2624	0.0496	0.1902	0.143	0.1493	0.26	0.05	0.18	0.16	0.234	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.206338	NA	NA	0.276163	0.152065	ID=COSN165495;OCCURENCE=1(breast)	0.123	NA	3.227437
1329	17	3786802	3786802	T	C	intronic	CAMKK1	NA	NA	NA	intronic	ENSG00000004660	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs737360	0.15	0.15	0.102	0.13119	0.2724	0.002	0.2522	0.0091	0.1984	0.28	NA	0.27	0.01	0.2237	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.590639	NA	NA	0.276512	0.056287	NA	0.275	NA	3.227388
1329	5	167798585	167798585	C	T	intronic	WWC1	NA	NA	NA	intronic	ENSG00000113645	NA	NA	NA	NA	NA	5q34	NA	Name=ZNF263	NA	NA	rs2287703	0.67	0.67	0.65	0.684704	0.5805	0.7272	0.7046	0.736	0.6646	0.57	0.74	0.71	0.74	0.62	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.338069	NA	NA	0.572791	0.731276	NA	0.558	NA	3.226709
1329	16	84485749	84485749	C	T	intronic	ATP2C2	NA	NA	NA	intronic	ENSG00000064270	NA	NA	NA	NA	NA	16q24.1	NA	NA	NA	NA	rs12149888	0.19	0.19	0.189	0.161542	0.2684	0.0962	0.2248	0.1377	0.1063	0.26	0.11	0.21	0.16	0.2235	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.285076	NA	NA	0.281468	0.12212	NA	0.188	NA	3.226632
1329	20	31025163	31025163	A	G	UTR3	ASXL1	NM_015338:c.*22A>G	NA	NA	UTR3	ENSG00000171456	ENST00000375687:c.*22A>G,ENST00000306058:c.*22A>G	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs2295764	0.41	0.41	0.369	0.39996	0.335	0.7431	0.4078	0.1649	0.4254	0.35	0.74	0.35	0.17	0.4065	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.053313	NA	NA	0.365233	0.187926	NA	0.203	NA	3.2266004
1329	14	106926808	106926808	A	G	intergenic	LINC00226,LINC00221	dist=181842;dist=11647	NA	NA	upstream	ENSG00000232216	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs2467908	0.27	0.27	0.261	0.301917	0.2734	0.1667	0.2291	0.4304	0.3487	0.27	0.17	0.22	0.42	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.945595	NA	NA	NA	NA	NA	0.261	NA	3.2266
1329	16	74938083	74938083	A	G	intronic	WDR59	NA	NA	NA	intronic	ENSG00000103091	NA	NA	NA	NA	NA	16q23.1	NA	NA	NA	NA	rs9930498	0.4	0.4	0.409	0.411542	0.3678	0.3413	0.2997	0.6445	0.2935	0.36	0.32	0.32	0.6	0.4057	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.332032	1.332032	NA	NA	NA	NA	0.522	NA	3.2265
1329	5	96136525	96136525	T	C	intronic	ERAP1	NA	NA	NA	intronic	ENSG00000164307	NA	NA	NA	NA	NA	5q15	NA	NA	NA	NA	rs27528	0.25	0.25	0.249	0.270966	0.2525	0.1984	0.3833	0.2761	0.2781	0.25	0.2	0.35	0.25	0.2684	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.934003	NA	NA	0.253023	0.239219	NA	0.268	NA	3.226077
1329	16	70422231	70422231	C	T	intronic	ST3GAL2	NA	NA	NA	ncRNA_intronic	ENSG00000260111	NA	NA	NA	NA	NA	16q22.1	NA	NA	NA	NA	rs4985526	0.27	0.27	0.255	0.226238	0.3976	0.3006	0.3199	0.0242	0.18	0.4	0.28	0.33	0.02	0.3286	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.775642	1.775642	NA	0.381395	0.083712	NA	0.196	NA	3.2257383
1329	16	18823192	18823192	A	G	intronic	SMG1	NA	NA	NA	ncRNA_intronic	ENSG00000260017	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs2291662	0.24	0.24	0.22	0.242412	0.3917	0.1091	0.2997	0.1346	0.3313	0.39	0.09	0.29	0.13	0.3254	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3618	NA	NA	0.390522	0.175293	NA	0.348	NA	3.2257113
1329	3	189705542	189705542	A	G	intronic	LEPREL1	NA	NA	NA	intronic	ENSG00000090530	NA	NA	NA	NA	NA	3q28	NA	NA	NA	NA	rs3114672	0.81	0.81	0.786	0.776158	0.7744	0.9306	0.7824	0.6619	0.7689	0.8	0.94	0.79	0.69	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.956226	NA	NA	NA	NA	NA	0.761	NA	3.2256
1329	5	1240848	1240848	A	C	intronic	SLC6A18	NA	NA	NA	intronic	ENSG00000164363	NA	NA	NA	NA	NA	5p15.33	NA	NA	NA	NA	rs6554684	0.68	0.68	0.715	0.696086	0.7744	0.2748	0.7017	0.9697	0.6759	0.77	0.28	0.73	0.96	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.636969	NA	NA	NA	NA	NA	0.797	NA	3.2256
1329	8	57389331	57389331	G	T	intergenic	PENK,LOC100507632	dist=30049;dist=41547	NA	NA	ncRNA_intronic	ENSG00000254254	NA	NA	NA	NA	NA	8q12.1	NA	NA	NA	NA	rs10958482	NA	NA	0.644	0.820088	0.7744	0.8909	0.7954	0.7874	0.8558	NA	NA	NA	NA	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.164205	NA	NA	NA	NA	NA	0.319	NA	3.2256
1329	16	55847045	55847045	A	G	intronic	CES1	NA	NA	NA	intronic	ENSG00000198848	NA	NA	NA	NA	NA	16q12.2	NA	NA	NA	NA	rs3859092	0.6	0.6	0.572	0.555711	0.7744	0.381	0.6902	0.4766	0.5225	0.79	0.38	0.72	0.49	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.734169	NA	NA	NA	NA	NA	0.536	NA	3.2256
1329	1	206769047	206769047	T	C	intronic	EIF2D	NA	NA	NA	intronic	ENSG00000143486	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs11584983	0.26	0.26	0.273	0.258586	0.2584	0.1835	0.2176	0.3396	0.2556	0.26	0.19	0.22	0.35	0.2588	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.511465	NA	NA	0.257209	0.306854	NA	0.29	NA	3.225591
1329	14	106091982	106091982	G	A	intergenic	TMEM121,ELK2AP	dist=95443;dist=43932	NA	NA	intronic	ENSG00000211892	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs10136838	0.29	0.29	0.277	0.298522	0.4414	0.5198	0.2637	0.0257	0.317	0.43	0.34	0.28	0.03	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.12613	NA	NA	NA	NA	NA	0.196	NA	3.2252667
1329	1	184764067	184764067	C	G	UTR3	FAM129A	NM_052966:c.*44G>C	NA	NA	UTR3	ENSG00000135842	ENST00000367511:c.*44G>C	NA	NA	NA	NA	1q25.3	NA	NA	NA	NA	rs581100	0.36	0.36	0.339	0.371006	0.3459	0.5635	0.366	0.1868	0.4509	0.34	0.53	0.38	0.18	0.3847	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.566926	1.566926	NA	0.377558	0.217204	NA	0.464	NA	3.2251754
1330	1	76276353	76276353	T	C	intronic	MSH4	NA	NA	NA	intronic	ENSG00000057468	NA	NA	NA	NA	NA	1p31.1	NA	NA	NA	NA	rs12122939	0.18	0.18	0.164	0.170527	0.2783	0.0169	0.2248	0.1543	0.2014	0.26	0.01	0.26	0.18	0.2352	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.433812	2.433812	NA	0.261772	0.172752	NA	0.225	NA	3.224728
1330	6	29524168	29524168	G	T	intronic	UBD	NA	NA	NA	intronic	ENSG00000204681,ENSG00000213886	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs2534790	0.17	0.17	0.145	0.18111	0.2495	0.1756	0.2089	0.0287	0.3027	0.26	0.17	0.19	0.03	0.2635	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.449205	1.449205	NA	0.262274	0.066269	NA	0.123	NA	3.224726
1330	6	31350303	31350303	T	G	intergenic	HLA-B,MICA	dist=25314;dist=21068	NA	NA	upstream	ENSG00000225851	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs2844535	0.28	0.28	0.262	0.285543	0.2753	0.1766	0.2781	0.3661	0.3047	0.29	0.19	0.29	0.35	NA	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.10697	NA	NA	NA	NA	NA	0.326	NA	3.2247
1330	17	29221227	29221227	A	T	intronic	ATAD5	NA	NA	NA	intronic	ENSG00000176208	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs9898911	0.88	0.88	0.908	0.889976	0.7753	0.999	0.7925	0.9425	0.8937	0.78	1	0.8	0.95	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.574085	NA	NA	NA	NA	NA	0.891	NA	3.2247
1330	17	41165734	41165734	C	T	intronic	IFI35	NA	NA	NA	intronic	ENSG00000068079	NA	NA	NA	NA	NA	17q21.31	NA	NA	NA	NA	rs443759	0.79	0.79	0.816	0.749601	0.7753	0.9177	0.7997	0.5885	0.7321	0.78	0.94	0.78	0.65	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.223747	NA	NA	NA	NA	NA	0.761	NA	3.2247
1330	17	56580997	56580997	T	C	intronic	MTMR4	NA	NA	NA	intronic	ENSG00000108389	NA	NA	NA	NA	NA	17q22	NA	NA	NA	NA	rs1860262	0.89	0.89	0.889	0.91274	0.7753	1	0.8833	0.9652	0.9141	0.79	1	0.85	0.96	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.581574	NA	NA	NA	NA	NA	0.775	NA	3.2247
1330	4	47679928	47679928	T	C	intronic	CORIN	NA	NA	NA	intronic	ENSG00000145244	NA	NA	NA	NA	NA	4p12	NA	NA	NA	NA	rs2271036	0.4	0.4	0.39	0.379792	0.2525	0.6071	0.2781	0.503	0.182	0.26	0.6	0.27	0.48	0.2931	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.787923	NA	NA	0.229767	0.455969	NA	0.355	NA	3.224633
1330	4	38879655	38879655	C	T	intronic	FAM114A1	NA	NA	NA	intronic	ENSG00000197712	NA	NA	NA	NA	NA	4p14	NA	NA	NA	NA	rs73236661	0.23	0.23	0.222	0.203275	0.2475	0.0863	0.2061	0.3192	0.1196	0.27	0.08	0.22	0.35	0.2553	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.518696	NA	NA	0.272674	0.307045	NA	0.181	NA	3.224526
1330	2	33174072	33174072	A	C	intronic	LTBP1	NA	NA	NA	intronic	ENSG00000049323	NA	NA	NA	NA	NA	2p22.3	NA	NA	NA	NA	rs150654	0.24	0.24	0.216	0.253594	0.3877	0.0248	0.2911	0.1823	0.4213	0.4	0.02	0.29	0.22	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.111293	NA	NA	0.387806	0.212428	NA	0.29	NA	3.224494
1330	4	67142620	67142620	G	A	intergenic	LOC100144602,CENPC1	dist=583516;dist=1195369	NA	NA	ncRNA_exonic	ENSG00000221563	NA	NA	NA	NA	NA	4q13.2	NA	NA	NA	NA	rs73239138	0.38	0.38	0.392	0.394169	0.2495	0.3651	0.2032	0.7277	0.2577	0.25	0.35	0.21	0.76	0.2869	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.706932	NA	NA	0.23981	0.644452	NA	0.449	NA	3.22379
1330	11	2357128	2357128	T	G	intergenic	TSPAN32,CD81	dist=17698;dist=41419	NA	NA	ncRNA_intronic	ENSG00000238184	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs2173887	0.62	0.62	0.61	0.617612	0.7763	0.4544	0.7147	0.4894	0.727	0.79	0.43	0.73	0.52	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.678037	NA	NA	NA	NA	NA	0.739	NA	3.2237
1330	12	101510371	101510371	T	G	intronic	ANO4	NA	NA	NA	intronic	ENSG00000151572	NA	NA	NA	NA	NA	12q23.1	NA	NA	NA	NA	rs349661	0.74	0.74	0.766	0.734824	0.7763	0.4504	0.7781	0.9667	0.6411	0.78	0.46	0.77	0.96	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.280123	NA	NA	NA	NA	NA	0.891	NA	3.2237
1330	12	123801672	123801672	T	G	intronic	SBNO1	NA	NA	NA	intronic	ENSG00000139697	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs10846515	0.78	0.78	0.745	0.755391	0.7763	0.998	0.7781	0.5136	0.7945	0.77	1	0.77	0.57	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.843277	NA	NA	NA	NA	NA	0.674	NA	3.2237
1330	6	102134022	102134022	C	G	intronic	GRIK2	NA	NA	NA	intronic	ENSG00000164418	NA	NA	NA	NA	NA	6q16.3	NA	NA	NA	NA	rs2786251	0.41	0.41	0.41	0.459065	0.2097	0.498	0.3934	0.7126	0.3793	0.2	0.48	0.37	0.69	0.3327	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.162843	NA	NA	0.233953	0.642987	NA	0.406	NA	3.223647
1330	11	1093710	1093710	C	G	exonic	MUC2	NA	synonymous SNV	MUC2:NM_002457:exon31:c.C5517G:p.P1839P	exonic	ENSG00000198788	NA	synonymous SNV	ENSG00000198788:ENST00000333592:exon1:c.C393G:p.P131P,ENSG00000198788:ENST00000441003:exon30:c.C5529G:p.P1843P	NA	NA	11p15.5	NA	NA	NA	NA	rs7944723	0.9	0.9	0.9	0.895767	0.8091	0.9931	0.853	0.9826	0.7975	0.82	1	0.82	0.98	0.826	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.577202	NA	NA	0.808112	0.957447	NA	0.457	NA	3.2234546
1330	16	8988777	8988777	C	G	intronic	USP7	NA	NA	NA	intronic	ENSG00000187555	NA	NA	NA	NA	NA	16p13.2	NA	NA	NA	NA	rs2304467	0.35	0.35	0.335	0.32488	0.3917	0.5655	0.3588	0.0242	0.3906	0.41	0.54	0.34	0.04	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.324785	NA	NA	0.385292	0.088873	NA	0.283	NA	3.223008
1330	1	168278264	168278264	G	A	intronic	TBX19	NA	NA	NA	intronic	ENSG00000143178	NA	NA	NA	NA	NA	1q24.2	NA	NA	NA	NA	rs1883148	0.74	0.74	0.758	0.725439	0.7773	0.7183	0.6441	0.7685	0.6789	0.77	0.71	0.67	0.76	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.233524	NA	NA	NA	NA	NA	0.783	NA	3.2227
1330	12	8196445	8196445	T	G	intronic	FOXJ2	NA	NA	NA	intronic	ENSG00000065970	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs2277414	0.58	0.58	0.555	0.566693	0.7773	0.2639	0.5965	0.5877	0.6125	0.77	0.27	0.64	0.62	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.967435	NA	NA	NA	NA	NA	0.681	NA	3.2227
1330	16	1547220	1547220	C	T	intronic	TELO2	NA	NA	NA	intronic	ENSG00000100726	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs2235630	0.56	0.56	0.52	0.519369	0.7773	0.4345	0.6398	0.2436	0.6288	0.78	0.47	0.65	0.24	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.652888	NA	NA	NA	NA	NA	0.529	NA	3.2227
1330	10	103799758	103799758	C	T	intronic	C10orf76	NA	NA	NA	intronic	ENSG00000120029	NA	NA	NA	NA	NA	10q24.32	NA	NA	NA	NA	rs11191190	0.35	0.35	0.345	0.322684	0.2535	0.5129	0.2507	0.295	0.2863	0.25	0.55	0.31	0.31	0.2804	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.038531	NA	NA	0.243555	0.282735	ID=COSN163750;OCCURENCE=1(NS)	0.37	NA	3.222545
1330	3	111794365	111794365	A	G	intronic	TMPRSS7	NA	NA	NA	intronic	ENSG00000176040	NA	NA	NA	NA	NA	3q13.2	NA	Name=Pol2	NA	NA	rs1907639	0.54	0.54	0.514	0.516374	0.6123	0.5278	0.5908	0.4145	0.4908	0.62	0.57	0.55	0.37	0.5697	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.543317	NA	NA	0.596635	0.420194	ID=COSN166969;OCCURENCE=1(large_intestine)	0.514	NA	3.221365
1330	17	29679246	29679246	G	A	intronic	NF1	NA	NA	NA	intronic	ENSG00000196712	NA	NA	NA	NA	NA	17q11.2	Score=963;Name=V$LHX3_01	NA	NA	NA	rs964288	0.44	0.44	0.405	0.430911	0.6203	0.369	0.415	0.2345	0.5767	0.63	0.38	0.45	0.22	0.5334	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.062244	NA	NA	0.625	0.295506	NA	0.348	NA	3.2213
1330	3	9979660	9979660	A	G	intronic	CRELD1	NA	NA	NA	intronic	ENSG00000163703	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs2302786	0.39	0.39	0.416	0.404752	0.2157	0.1567	0.3401	0.8911	0.2434	0.22	0.21	0.35	0.88	0.3077	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.047527	NA	NA	0.255349	0.774296	NA	0.609	NA	3.221251
1330	10	116060387	116060387	T	C	exonic	AFAP1L2	NA	synonymous SNV	AFAP1L2:NM_001001936:exon14:c.A1605G:p.R535R,AFAP1L2:NM_032550:exon14:c.A1605G:p.R535R	exonic	ENSG00000169129	NA	synonymous SNV	ENSG00000169129:ENST00000304129:exon14:c.A1605G:p.R535R,ENSG00000169129:ENST00000369271:exon14:c.A1605G:p.R535R,ENSG00000169129:ENST00000545353:exon15:c.A1764G:p.R588R	NA	NA	10q25.3	NA	NA	NA	NA	rs2286396	0.66	0.66	0.617	0.641573	0.831	0.7054	0.8372	0.3003	0.7035	0.83	0.68	0.81	0.29	0.7791	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.449594	2.449594	NA	0.835349	0.381071	NA	0.674	NA	3.2212176
1330	8	27308961	27308961	C	T	intronic	PTK2B	NA	NA	NA	intronic	ENSG00000120899	NA	NA	NA	NA	NA	8p21.2	NA	NA	NA	NA	rs2278319	0.21	0.21	0.206	0.199081	0.2694	0.244	0.2752	0.0454	0.2342	0.26	0.22	0.28	0.08	0.2504	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.007494	NA	NA	0.25907	0.078983	ID=COSN168294;OCCURENCE=1(large_intestine)	0.181	NA	3.22113
1330	19	18652844	18652844	A	G	intronic	FKBP8	NA	NA	NA	UTR5	ENSG00000105701	ENST00000599540:c.-64T>C	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs10854166	0.37	0.37	0.331	0.341054	0.4871	0.4107	0.5274	0.0295	0.408	0.5	0.4	0.5	0.04	0.4585	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.346958	NA	NA	NA	NA	NA	0.442	NA	3.2210667
1330	4	1698183	1698183	C	T	intronic	SLBP	NA	NA	NA	intronic	ENSG00000163950	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs798719	0.75	0.75	0.758	0.738219	0.7793	0.8522	0.6988	0.5991	0.7945	0.79	0.87	0.7	0.59	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.957159	NA	NA	NA	NA	NA	0.703	NA	3.2207
1330	7	116903076	116903076	T	C	intergenic	ST7,WNT2	dist=33001;dist=13610	NA	NA	ncRNA_exonic	ENSG00000230785	NA	NA	NA	NA	NA	7q31.2	NA	NA	NA	NA	rs4730772	0.84	0.84	0.837	0.870208	0.7793	0.9901	0.8646	0.854	0.8661	0.77	0.99	0.82	0.8	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.282211	NA	NA	NA	NA	NA	0.768	NA	3.2207
1330	8	19682545	19682545	A	G	intronic	INTS10	NA	NA	NA	intronic	ENSG00000104613	NA	NA	NA	NA	NA	8p21.3	NA	NA	NA	NA	rs3816246	0.7	0.7	0.697	0.697085	0.7793	0.6567	0.6686	0.6596	0.7249	0.77	0.64	0.7	0.63	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.529345	NA	NA	NA	NA	NA	0.768	NA	3.2207
1330	8	19682592	19682592	A	G	intronic	INTS10	NA	NA	NA	intronic	ENSG00000104613	NA	NA	NA	NA	NA	8p21.3	NA	NA	NA	NA	rs7018076	0.7	0.7	0.7	0.697284	0.7793	0.6567	0.6686	0.6596	0.726	0.77	0.64	0.7	0.63	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.163388	NA	NA	NA	NA	NA	0.768	NA	3.2207
1330	2	29136489	29136489	G	T	intronic	WDR43	NA	NA	NA	intronic	ENSG00000163811	NA	NA	NA	NA	NA	2p23.2	NA	NA	NA	NA	rs4666132	0.4	0.4	0.355	0.377596	0.2266	0.7907	0.4524	0.1967	0.2986	0.24	0.78	0.41	0.2	0.3227	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.976251	NA	NA	0.230035	0.215183	NA	0.348	NA	3.220665
1330	1	181732695	181732695	A	G	intronic	CACNA1E	NA	NA	NA	intronic	ENSG00000198216	NA	NA	NA	NA	NA	1q25.3	NA	NA	NA	NA	rs72735265	0.21	0.21	0.204	0.26238	0.2634	0.0744	0.2983	0.3215	0.3497	0.26	0.06	0.25	0.29	0.2629	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.824933	NA	NA	0.253097	0.28765	NA	0.232	NA	3.220603
1330	6	15487782	15487782	C	G	intronic	JARID2	NA	NA	NA	intronic	ENSG00000008083	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs2076056	0.22	0.22	0.206	0.201877	0.2555	0.3075	0.2205	0.1006	0.1616	0.26	0.28	0.21	0.1	0.2643	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.646962	NA	NA	0.259651	0.13005	NA	0.304	NA	3.220549
1330	2	170622991	170622991	C	T	intergenic	PHOSPHO2-KLHL23,SSB	dist=14595;dist=32331	NA	NA	intronic	ENSG00000213160	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	rs28462195	0.35	0.35	0.357	0.347045	0.4463	0.3393	0.2925	0.295	0.362	0.46	0.31	0.27	0.28	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.790516	1.790516	NA	NA	NA	NA	0.362	NA	3.2203667
1330	11	118852081	118852081	A	G	downstream	FOXR1	NA	NA	NA	downstream	ENSG00000176302	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs4938606	0.4	0.4	0.377	0.426318	0.4463	0.1825	0.6066	0.4766	0.4611	0.43	0.17	0.58	0.49	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.111645	NA	NA	NA	NA	NA	0.486	NA	3.2203666
1330	9	136133531	136133531	A	G	intronic	ABO	NA	NA	NA	ncRNA_intronic	ENSG00000175164	NA	NA	NA	NA	NA	9q34.2	NA	NA	NA	NA	rs4962040	0.32	0.32	0.286	0.3123	0.3807	0.3224	0.3213	0.202	0.3742	0.38	0.3	0.37	0.23	0.3424	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.868957	NA	NA	0.390258	0.23226	NA	0.406	NA	3.2199753
1330	4	100258007	100258007	T	C	intronic	ADH1C	NA	NA	NA	intronic	ENSG00000248144	NA	NA	NA	NA	NA	4q23	NA	NA	NA	NA	rs1612735	0.24	0.24	0.219	0.214457	0.4056	0.0764	0.2709	0.0991	0.2761	0.42	0.07	0.31	0.12	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.080002	NA	NA	0.374607	0.151012	NA	0.232	NA	3.219793
1330	2	29136623	29136623	T	C	intronic	WDR43	NA	NA	NA	intronic	ENSG00000163811	NA	NA	NA	NA	NA	2p23.2	NA	NA	NA	NA	rs4666133	0.4	0.4	0.352	0.377995	0.2276	0.7907	0.4524	0.1974	0.2986	0.23	0.78	0.41	0.2	0.3226	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.712633	NA	NA	0.230035	0.215753	NA	0.355	NA	3.219765
1330	4	75248685	75248685	G	A	intronic	EREG	NA	NA	NA	intronic	ENSG00000124882	NA	NA	NA	NA	NA	4q13.3	NA	NA	NA	NA	rs2367709	0.66	0.66	0.672	0.638179	0.7803	0.5972	0.7608	0.5166	0.6115	0.78	0.59	0.75	0.48	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.00626	NA	NA	NA	NA	NA	0.58	NA	3.2197
1330	20	42265966	42265966	G	A	intronic	IFT52	NA	NA	NA	intronic	ENSG00000101052	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs6031008	0.73	0.73	0.72	0.733427	0.7803	0.7927	0.7767	0.5961	0.7791	0.77	0.76	0.78	0.59	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.556554	NA	NA	NA	NA	NA	0.754	NA	3.2197
1330	1	1330726	1330726	A	G	intronic	CCNL2	NA	NA	NA	intronic	ENSG00000221978	NA	NA	NA	NA	NA	1p36.33	NA	NA	NA	NA	rs1240746	0.6	0.6	0.591	0.68111	0.1809	0.9792	0.5447	0.9228	0.6585	0.18	0.98	0.47	0.92	0.426	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.327966	NA	NA	0.173453	0.80895	NA	0.514	NA	3.219647
1330	1	46818508	46818508	T	C	intronic	NSUN4	NA	NA	NA	intronic	ENSG00000117481	NA	NA	NA	NA	NA	1p33	NA	NA	NA	NA	rs7529674	0.16	0.16	0.134	0.131789	0.2724	0.0179	0.147	0.1331	0.092	0.27	0.02	0.17	0.13	0.2185	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.609636	NA	NA	0.289884	0.152519	NA	0.174	NA	3.219216
1330	21	43826344	43826344	C	T	intronic	UBASH3A	NA	NA	NA	intronic	ENSG00000160185	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs3746923	0.42	0.42	0.43	0.429313	0.3688	0.4603	0.3545	0.5272	0.3804	0.38	0.45	0.38	0.5	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.882126	NA	NA	0.412005	0.495665	NA	0.457	NA	3.219195
1330	3	108112760	108112760	C	T	intronic	MYH15	NA	NA	NA	intronic	ENSG00000144821	NA	NA	NA	NA	NA	3q13.13	NA	NA	NA	NA	rs2290601	0.63	0.63	0.653	0.659145	0.7813	0.496	0.6614	0.6112	0.7648	0.76	0.45	0.69	0.6	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.893354	NA	NA	NA	NA	NA	0.717	NA	3.2187
1330	7	137798593	137798593	A	T	intronic	AKR1D1	NA	NA	NA	intronic	ENSG00000122787	NA	NA	NA	NA	NA	7q33	NA	NA	NA	NA	rs2306847	0.77	0.77	0.782	0.778954	0.7813	0.7381	0.6614	0.8752	0.772	0.78	0.71	0.68	0.88	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.211192	NA	NA	NA	NA	NA	0.855	NA	3.2187
1330	8	4930433	4930433	G	A	intergenic	CSMD1,LOC100287015	dist=78105;dist=1330644	NA	NA	upstream	ENSG00000253262	NA	NA	NA	NA	NA	8p23.2	NA	NA	NA	NA	rs4875138	0.17	0.17	0.166	0.16234	0.2813	0.0734	0.1354	0.1097	0.2219	0.28	0.09	0.16	0.12	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.365944	NA	NA	NA	NA	NA	0.21	NA	3.2187
1330	9	27609514	27609514	G	A	intergenic	C9orf72,LINGO2	dist=35650;dist=338570	NA	NA	ncRNA_exonic	ENSG00000215441	NA	NA	NA	NA	NA	9p21.2	NA	NA	NA	NA	rs810174	0.74	0.74	0.727	0.732029	0.7813	0.7599	0.7709	0.5998	0.8037	0.78	0.76	0.77	0.63	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.034065	NA	NA	NA	NA	NA	0.645	NA	3.2187
1330	15	25414445	25414445	A	G	intergenic	PAR1,SNORD115-1	dist=31245;dist=1425	NA	NA	ncRNA_intronic	ENSG00000224078	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs2739832	0.76	0.76	0.714	0.743211	0.7813	0.998	0.83	0.3381	0.9274	0.78	1	0.83	0.38	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.687577	NA	NA	NA	NA	NA	0.667	NA	3.2187
1330	17	4621773	4621773	T	G	intronic	ARRB2	NA	NA	NA	intronic	ENSG00000141480	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs4522461	0.89	0.89	0.879	0.90016	0.7813	0.997	0.866	0.916	0.9254	0.79	1	0.86	0.91	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.46736	1.46736	NA	NA	NA	NA	0.797	NA	3.2187
1330	22	41914593	41914593	C	T	intronic	ACO2	NA	NA	NA	intronic	ENSG00000100412	NA	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs203319	0.45	0.45	0.432	0.484425	0.2306	0.5724	0.5591	0.6082	0.4346	0.22	0.52	0.54	0.64	0.3371	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.197352	NA	NA	0.213605	0.539265	NA	0.493	NA	3.218695
1330	11	116631391	116631391	T	C	intronic	BUD13	NA	NA	NA	intronic	ENSG00000137656	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs3741301	0.31	0.31	0.311	0.257987	0.4235	0.3304	0.2363	0.1029	0.2382	0.46	0.3	0.27	0.12	0.3579	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.534929	NA	NA	NA	NA	NA	0.391	NA	3.2186
1330	2	219142594	219142594	C	T	intronic	PNKD,TMBIM1	NA	NA	NA	intronic	ENSG00000127838,ENSG00000135926	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs3817266	0.33	0.33	0.287	0.327676	0.3698	0.378	0.402	0.1952	0.3589	0.36	0.36	0.38	0.21	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.778696	1.778696	NA	0.411691	0.234827	NA	0.312	NA	3.218509
1330	19	53792794	53792794	G	C	downstream	BIRC8	NA	NA	NA	downstream	ENSG00000163098	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs8106055	0.4	0.4	0.373	0.404353	0.4483	0.3601	0.5173	0.3737	0.3661	0.46	0.33	0.48	0.35	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.976755	NA	NA	NA	NA	NA	0.348	NA	3.2183666
1330	8	27293335	27293335	G	T	intronic	PTK2B	NA	NA	NA	intronic	ENSG00000120899	NA	NA	NA	NA	NA	8p21.2	NA	NA	NA	NA	rs11774417	0.21	0.21	0.192	0.20008	0.2714	0.245	0.2767	0.0461	0.2342	0.26	0.22	0.28	0.08	0.2513	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.805611	NA	NA	0.258953	0.078756	NA	0.181	NA	3.218347
1330	7	43540264	43540264	A	G	intronic	HECW1	NA	NA	NA	intronic	ENSG00000002746	NA	NA	NA	NA	NA	7p13	NA	NA	NA	NA	rs2304325	0.25	0.25	0.265	0.265974	0.2515	0.2183	0.2233	0.2731	0.3507	0.26	0.22	0.26	0.27	0.2777	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.559456	NA	NA	0.252611	0.244397	NA	0.29	NA	3.218189
1330	15	86087212	86087212	C	T	intronic	AKAP13	NA	NA	NA	intronic	ENSG00000170776	NA	NA	NA	NA	NA	15q25.3	NA	Name=CTCF	Name=34	NA	rs7162720	0.9	0.9	0.92	0.902955	0.9354	0.7708	0.7853	0.9939	0.9663	0.94	0.81	0.84	0.99	0.9176	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.684941	NA	NA	0.929518	0.982516	NA	0.92	NA	3.217482
1330	13	25591655	25591655	A	G	intergenic	TPTE2P1,PABPC3	dist=49048;dist=78621	NA	NA	exonic	ENSG00000269099	NA	nonsynonymous SNV	ENSG00000269099:ENST00000599825:exon1:c.A115G:p.T39A	NA	NA	13q12.13	NA	NA	NA	NA	rs4238180	0.79	0.79	0.77	0.777756	0.8062	0.6905	0.8156	0.8752	0.68	0.82	0.68	0.83	0.86	0.8097	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.685418	NA	1	NA	NA	ID=COSN164447;OCCURENCE=1(breast)	0.819	NA	3.2174334
1330	8	141549383	141549383	A	G	intronic	AGO2	NA	NA	NA	intronic	ENSG00000123908	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs13252337	0.24	0.24	0.204	0.222244	0.2664	0.3304	0.2839	0.0439	0.2628	0.27	0.34	0.26	0.06	0.2557	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.234528	NA	NA	0.261047	0.074671	NA	0.159	NA	3.216853
1330	5	147498672	147498672	G	A	intronic	SPINK5	NA	NA	NA	intronic	ENSG00000133710	NA	NA	NA	NA	NA	5q32	NA	NA	Name=5	NA	rs12518996	0.49	0.49	0.461	0.488419	0.5924	0.4821	0.634	0.3139	0.5204	0.56	0.46	0.59	0.36	0.5817	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.989673	NA	NA	0.609071	0.36627	NA	0.471	NA	3.216829
1330	6	139229695	139229695	A	G	intronic	REPS1	NA	NA	NA	intronic	ENSG00000135597	NA	NA	NA	NA	NA	6q24.1	NA	NA	NA	NA	rs1188867	0.76	0.76	0.73	0.777556	0.7833	0.6389	0.8386	0.8729	0.7423	0.77	0.64	0.81	0.85	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.04872	NA	NA	NA	NA	NA	0.87	NA	3.2167
1330	8	23179514	23179514	G	A	intronic	LOXL2	NA	NA	NA	intronic	ENSG00000134013	NA	NA	NA	NA	NA	8p21.3	NA	NA	NA	NA	rs13272093	0.68	0.68	0.677	0.654553	0.7833	0.6538	0.5548	0.6127	0.6503	0.78	0.64	0.62	0.61	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.648995	NA	NA	NA	NA	NA	0.71	NA	3.2167
1330	12	27081566	27081566	C	G	intronic	ASUN	NA	NA	NA	intronic	ENSG00000064102	NA	NA	NA	NA	NA	12p11.23	NA	NA	NA	NA	rs2029309	0.89	0.89	0.894	0.897165	0.7833	1	0.8804	0.9349	0.8691	0.8	1	0.86	0.93	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.926782	NA	NA	NA	NA	NA	0.848	NA	3.2167
1330	18	57147392	57147392	G	T	intronic	CCBE1	NA	NA	NA	intronic	ENSG00000183287	NA	NA	NA	NA	NA	18q21.32	NA	NA	NA	NA	rs1663549	0.28	0.28	0.245	0.259585	0.2972	0.2024	0.2824	0.3041	0.2035	0.3	0.21	0.31	0.3	0.2661	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.238367	NA	NA	0.220664	0.237045	NA	NA	NA	3.216036
1330	2	239469431	239469431	C	T	intergenic	LOC151171,TWIST2	dist=5291;dist=287242	NA	NA	intergenic	ENSG00000225493,ENSG00000234279	dist=5736;dist=159534	NA	NA	NA	NA	2q37.3	NA	NA	NA	NA	rs72984530	0.07	0.07	0.065	0.0527157	0.1173	0.0655	0.0476	0.0038	0.0429	0.12	0.07	0.04	0.01	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.35741	NA	NA	NA	NA	NA	0.065	NA	3.2160334
1330	2	114501242	114501242	T	C	intronic	SLC35F5	NA	NA	NA	intronic	ENSG00000115084	NA	NA	NA	NA	NA	2q14.1	NA	NA	NA	NA	rs3748907	0.17	0.17	0.179	0.178115	0.2873	0.126	0.1945	0.0915	0.2249	0.26	0.12	0.2	0.08	0.224	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.82338	NA	NA	0.272674	0.11762	NA	0.203	NA	3.216026
1330	2	90007670	90007670	G	A	intergenic	MIR4436A,LOC654342	dist=895702;dist=1817039	NA	NA	upstream	ENSG00000224607	NA	NA	NA	NA	NA	2p11.2	NA	Name=Pol2	NA	NA	rs2847917	0.48	0.48	0.438	0.484824	0.6809	0.3909	0.5778	0.2504	0.6309	0.67	0.38	0.59	0.2	0.6034	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.0248	NA	NA	NA	NA	NA	0.384	NA	3.2157
1330	13	25780123	25780123	T	C	intergenic	AMER2,MTMR6	dist=34266;dist=40218	NA	NA	ncRNA_intronic	ENSG00000225105	NA	NA	NA	NA	NA	13q12.13	NA	NA	NA	NA	rs4372559	0.63	0.63	0.627	0.610423	0.7843	0.4306	0.683	0.5514	0.6452	0.8	0.42	0.67	0.57	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.750167	NA	NA	NA	NA	NA	0.717	NA	3.2157
1330	17	73282636	73282636	C	T	intronic	SLC25A19	NA	NA	NA	intronic	ENSG00000125454	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs2306219	0.74	0.74	0.721	0.692292	0.7843	0.8403	0.7723	0.4743	0.683	0.8	0.91	0.75	0.46	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.684873	NA	NA	NA	NA	NA	0.623	NA	3.2157
1330	18	22010421	22010421	C	T	intronic	IMPACT	NA	NA	NA	intronic	ENSG00000154059	NA	NA	NA	NA	NA	18q11.2	NA	NA	NA	NA	rs9783924	0.67	0.67	0.634	0.639177	0.7843	0.6111	0.7752	0.4236	0.7137	0.78	0.64	0.75	0.47	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.906277	NA	NA	NA	NA	NA	0.551	NA	3.2157
1330	22	24452885	24452885	A	G	intronic	CABIN1	NA	NA	NA	intronic	ENSG00000099991	NA	NA	NA	NA	NA	22q11.23	NA	NA	NA	NA	rs2070467	0.69	0.69	0.666	0.699681	0.7843	0.6042	0.8069	0.621	0.7413	0.8	0.56	0.83	0.58	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.77046	NA	NA	NA	NA	NA	0.572	NA	3.2157
1330	1	227299978	227299978	C	T	intronic	CDC42BPA	NA	NA	NA	intronic	ENSG00000143776	NA	NA	NA	NA	NA	1q42.13	NA	NA	NA	NA	rs2458521	0.29	0.29	0.285	0.257987	0.2624	0.247	0.2695	0.3714	0.1033	0.27	0.27	0.28	0.38	0.2624	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.429149	NA	NA	0.259767	0.350363	NA	0.254	NA	3.215433
1330	2	203152355	203152355	G	A	intronic	NOP58	NA	NA	NA	intronic	ENSG00000055044	NA	NA	NA	NA	NA	2q33.1	NA	NA	NA	NA	rs7572505	0.31	0.31	0.306	0.358826	0.2535	0.126	0.3573	0.6256	0.3476	0.26	0.1	0.3	0.64	0.2852	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.307894	1.307894	NA	0.24593	0.533137	NA	0.232	NA	3.21537
1330	19	5210622	5210622	G	A	intronic	PTPRS	NA	NA	NA	intronic	ENSG00000105426	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs2302224	0.26	0.26	0.228	0.282348	0.2624	0.0764	0.379	0.3911	0.2996	0.26	0.07	0.37	0.41	0.265	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.048708	NA	NA	0.257326	0.331593	NA	0.167	NA	3.215274
1330	9	99006578	99006578	T	C	intronic	HSD17B3	NA	NA	NA	intronic	ENSG00000130948	NA	NA	NA	NA	NA	9q22.32	NA	NA	NA	NA	rs2066486	0.21	0.21	0.21	0.188698	0.2714	0.0337	0.1571	0.3094	0.1227	0.28	0.04	0.16	0.35	0.2266	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.49593	NA	NA	0.28686	0.314798	NA	0.174	NA	3.21514
1330	15	80845136	80845136	C	T	intronic	ARNT2	NA	NA	NA	intronic	ENSG00000172379	NA	NA	NA	NA	NA	15q25.1	NA	NA	NA	NA	rs3924894	0.34	0.34	NA	0.398163	0.3996	0.248	0.3847	0.6725	0.1902	0.32	0.2	0.38	0.48	0.3667	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.527761	NA	NA	0.018605	0.062188	NA	NA	NA	3.215095
1330	14	23855849	23855849	C	T	intronic	MYH6	NA	NA	NA	intronic	ENSG00000197616	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs2071634	0.23	0.23	0.219	0.235224	0.2684	0.1756	0.2334	0.1679	0.3548	0.27	0.19	0.26	0.18	0.2532	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.09556	NA	NA	0.263378	0.193688	NA	0.181	NA	3.215022
1331	19	48533856	48533856	A	G	intronic	CABP5	NA	NA	NA	intronic	ENSG00000105507	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs35063174	0.15	0.15	0.146	0.127995	0.2704	0.0347	0.219	0.0159	0.1646	0.26	0.04	0.26	0.04	0.2308	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.146136	NA	NA	0.283837	0.056514	NA	0.181	NA	3.214963
1331	12	7967135	7967135	T	A	intronic	SLC2A14	NA	NA	NA	intronic	ENSG00000173262	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs11055945	0.26	0.26	0.217	0.288538	0.2555	0.4831	0.2421	0.1551	0.3354	0.24	0.47	0.2	0.12	0.2846	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.610832	NA	NA	0.245173	0.177808	ID=COSM147411;OCCURENCE=1(stomach)	0.261	NA	3.214727
1331	10	100167436	100167436	T	C	intronic	PYROXD2	NA	NA	NA	intronic	ENSG00000119943	NA	NA	NA	NA	NA	10q24.2	NA	NA	NA	NA	rs45523432	0.37	0.37	0.304	0.418131	0.2356	0.4395	0.379	0.5076	0.4908	0.22	0.46	0.36	0.51	0.284	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.9639	NA	NA	0.265698	0.47685	ID=COSN163733;OCCURENCE=1(breast)	0.138	NA	3.214702
1331	5	179763398	179763398	T	G	intronic	GFPT2	NA	NA	NA	intronic	ENSG00000131459	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs6891083	0.79	0.79	0.811	0.780351	0.7853	0.6776	0.7161	0.9054	0.7577	0.79	0.72	0.75	0.92	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.725846	NA	NA	NA	NA	NA	0.804	NA	3.2147
1331	15	91483531	91483531	C	T	intronic	UNC45A	NA	NA	NA	intronic	ENSG00000140553	NA	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs17593423	0.14	0.14	0.128	0.110423	0.3002	NA	0.1556	0.0204	0.1186	0.3	NA	0.19	0.03	0.208	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.880712	NA	NA	0.277455	0.063012	NA	0.196	NA	3.214345
1331	10	100167451	100167451	C	G	intronic	PYROXD2	NA	NA	NA	intronic	ENSG00000119943	NA	NA	NA	NA	NA	10q24.2	NA	NA	NA	NA	rs12763044	0.37	0.37	0.306	0.417332	0.2356	0.4395	0.3775	0.5053	0.4908	0.22	0.46	0.36	0.51	0.2848	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.565812	NA	NA	0.265698	0.47231	NA	0.109	NA	3.213902
1331	15	80845137	80845137	T	C	intronic	ARNT2	NA	NA	NA	intronic	ENSG00000172379	NA	NA	NA	NA	NA	15q25.1	NA	NA	NA	NA	rs3924893	0.34	0.34	0.014	0.398163	0.3996	0.248	0.3847	0.6725	0.1902	0.32	0.2	0.38	0.48	0.3668	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.259703	NA	NA	0.019884	0.070586	NA	NA	NA	3.213716
1331	11	134234406	134234406	A	T	intronic	GLB1L2	NA	NA	NA	intronic	ENSG00000149328	NA	NA	NA	NA	NA	11q25	NA	NA	NA	NA	rs4262740	0.89	0.89	0.894	0.922524	0.7863	0.994	0.9063	0.9879	0.9121	0.76	1	0.88	0.98	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.149439	NA	NA	NA	NA	NA	0.536	NA	3.2137
1331	13	32852585	32852585	C	T	intronic	FRY	NA	NA	NA	intronic	ENSG00000073910	NA	NA	NA	NA	NA	13q13.1	NA	NA	NA	NA	rs11617081	0.15	0.15	0.135	0.139976	0.2753	0.003	0.1873	0.1142	0.1431	0.28	0.01	0.17	0.11	0.2263	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.67137	NA	NA	0.284946	0.121703	NA	0.138	NA	3.213454
1331	7	6854512	6854512	G	A	intronic	CCZ1B	NA	NA	NA	intronic	ENSG00000146574	NA	NA	NA	NA	NA	7p22.1	NA	NA	NA	NA	rs58851147	0.3	0.3	0.302	0.328474	0.2445	0.4196	0.2464	0.3268	0.3814	0.24	0.39	0.29	0.28	0.2842	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.3576	NA	NA	0.258034	0.298424	NA	0.101	NA	3.213266
1331	10	55590950	55590950	C	T	intronic	PCDH15	NA	NA	NA	intronic	ENSG00000150275	NA	NA	NA	NA	NA	10q21.1	NA	NA	NA	NA	rs77597438	NA	NA	NA	0.440895	0.3678	0.7232	0.4251	0.2474	0.498	NA	NA	NA	NA	0.4193	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.044996	NA	NA	NA	NA	NA	NA	NA	3.2129
1331	8	2027434	2027434	G	C	intronic	MYOM2	NA	NA	NA	intronic	ENSG00000036448	NA	NA	NA	NA	NA	8p23.3	NA	NA	NA	NA	rs2235120	0.77	0.77	0.759	0.784545	0.7873	0.8244	0.853	0.6475	0.8773	0.78	0.85	0.8	0.62	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.436328	NA	NA	NA	NA	NA	0.681	NA	3.2127
1331	17	73732522	73732522	T	G	intronic	ITGB4	NA	NA	NA	intronic	ENSG00000132470	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs820176	0.7	0.7	0.713	0.689896	0.7873	0.5952	0.7061	0.7269	0.6258	0.77	0.55	0.77	0.69	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.387198	NA	NA	NA	NA	NA	0.696	NA	3.2127
1331	14	23853629	23853629	T	C	intronic	MYH6	NA	NA	NA	intronic	ENSG00000197616	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs8006357	0.22	0.22	0.198	0.229633	0.2704	0.1835	0.2305	0.1452	0.3487	0.27	0.2	0.26	0.16	0.2528	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.196393	NA	NA	0.264419	0.171584	NA	0.174	NA	3.212381
1331	6	30076755	30076755	G	A	intronic	TRIM31	NA	NA	NA	ncRNA_intronic	ENSG00000231226	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs2074483	0.28	0.28	0.266	0.279153	0.3718	0.2242	0.2637	0.1641	0.407	0.37	0.23	0.3	0.18	0.3529	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.375751	NA	NA	0.396456	0.199206	NA	0.232	NA	3.2121773
1331	6	170592293	170592293	C	G	intronic	DLL1	NA	NA	NA	intronic	ENSG00000198719	NA	NA	NA	NA	NA	6q27	NA	NA	NA	NA	rs2295205	0.18	0.18	0.162	0.179113	0.2763	0.1349	0.2378	0.1036	0.1851	0.27	0.11	0.23	0.09	0.2424	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.193593	NA	NA	0.269231	0.133547	ID=COSN167944;OCCURENCE=1(large_intestine)	0.203	NA	3.212069
1331	15	82302537	82302537	A	G	intergenic	TMC3,MEX3B	dist=636119;dist=31582	NA	NA	downstream	ENSG00000259622	NA	NA	NA	NA	NA	15q25.2	NA	NA	NA	NA	rs34593711	0.17	0.17	0.168	0.34385	0.2883	0.2897	0.2046	0.559	0.2648	0.12	0.15	0.07	0.32	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.667901	1.667901	NA	NA	NA	NA	0.007	NA	3.2117
1331	5	147516470	147516470	C	T	intronic	SPINK5	NA	NA	NA	intronic	ENSG00000133710	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs4334874	0.49	0.49	0.505	0.491014	0.4076	0.5188	0.3602	0.6097	0.4806	0.44	0.54	0.41	0.57	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.80254	NA	NA	0.381207	0.578757	NA	0.522	NA	3.211193
1331	19	7167951	7167951	T	G	intronic	INSR	NA	NA	NA	intronic	ENSG00000171105	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs2860177	0.24	0.24	0.238	0.247804	0.2883	0.2589	0.2435	0.2057	0.2546	0.29	0.21	0.25	0.19	0.257	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.675808	NA	NA	0.243605	0.207671	ID=COSN165704;OCCURENCE=1(NS)	0.174	NA	3.211095
1331	19	41928724	41928724	G	A	intronic	BCKDHA	NA	NA	NA	intronic	ENSG00000248098,ENSG00000255730	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs284654	0.58	0.58	0.61	0.585663	0.5924	0.4325	0.4726	0.7466	0.5992	0.58	0.46	0.55	0.76	0.5896	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.384566	NA	NA	0.607093	0.71448	NA	0.652	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000079271.1;CLNDSDB=.;CLNDSDBID=.	3.210907
1331	7	55411534	55411534	T	C	intergenic	EGFR,LANCL2	dist=136503;dist=21607	NA	NA	ncRNA_exonic	ENSG00000230936	NA	NA	NA	NA	NA	7p11.2	NA	NA	NA	NA	rs6973337	0.84	0.84	0.832	0.830272	0.7893	0.8016	0.8357	0.9713	0.7076	0.8	0.8	0.81	0.97	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.252103	NA	NA	NA	NA	NA	0.913	NA	3.2107
1331	1	111784816	111784816	G	A	intronic	CHI3L2	NA	NA	NA	intronic	ENSG00000064886	NA	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	rs11102221	0.25	0.25	0.257	0.279553	0.2425	0.1171	0.3429	0.3699	0.318	0.23	0.12	0.31	0.39	0.2821	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.077104	NA	NA	0.264767	0.342488	NA	0.268	NA	3.210633
1331	12	29462224	29462224	C	G	intronic	FAR2	NA	NA	NA	ncRNA_intronic	ENSG00000257176	NA	NA	NA	NA	NA	12p11.22	NA	NA	NA	NA	rs6487807	0.64	0.64	0.667	0.666933	0.5636	0.6964	0.4712	0.8623	0.6176	0.57	0.67	0.45	0.86	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.725756	NA	NA	0.559215	0.833092	NA	0.63	NA	3.2105183
1331	4	88005203	88005203	G	A	intronic	AFF1	NA	NA	NA	intronic	ENSG00000172493	NA	NA	NA	NA	NA	4q22.1	NA	NA	NA	NA	rs236996	0.44	0.44	0.463	0.451877	0.3986	0.4097	0.3343	0.5106	0.5542	0.42	0.42	0.33	0.54	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.002403	NA	NA	0.390949	0.505058	NA	0.355	NA	3.210451
1331	17	39620733	39620733	G	C	intronic	KRT32	NA	NA	NA	intronic	ENSG00000108759	NA	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs2604958	0.31	0.31	0.333	0.308307	0.2515	0.4157	0.1816	0.3729	0.2587	0.26	0.42	0.2	0.35	0.2691	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.168573	NA	NA	0.269186	0.350885	NA	0.275	NA	3.210214
1331	1	46810842	46810842	C	T	intronic	NSUN4	NA	NA	NA	intronic	ENSG00000117481	NA	NA	NA	NA	NA	1p33	NA	NA	NA	NA	rs6684274	0.16	0.16	0.154	0.131989	0.2724	0.0179	0.147	0.1339	0.092	0.27	0.02	0.17	0.14	0.2278	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.137037	NA	NA	0.289651	0.152973	NA	0.203	NA	3.210149
1331	2	220421479	220421479	A	G	intronic	OBSL1	NA	NA	NA	intronic	ENSG00000124006	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs13010015	0.27	0.27	0.229	0.233427	0.2555	0.2827	0.2968	0.2519	0.09	0.26	0.3	0.29	0.22	0.2801	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.232498	NA	NA	0.254686	0.246802	NA	0.159	NA	3.209714
1331	14	94833033	94833033	T	C	intergenic	SERPINA6,SERPINA1	dist=43345;dist=10051	NA	NA	ncRNA_exonic	ENSG00000258597	NA	NA	NA	NA	NA	14q32.13	NA	NA	NA	NA	rs1956172	0.78	0.78	0.791	0.775359	0.7903	0.9851	0.8804	0.5015	0.8395	0.77	0.98	0.87	0.51	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.526574	NA	1	NA	NA	NA	0.804	NA	3.2097
1331	11	62098407	62098407	G	A	intergenic	SCGB1D4,ASRGL1	dist=31871;dist=6367	NA	NA	upstream	ENSG00000255213	NA	NA	NA	NA	NA	11q12.3	NA	NA	NA	NA	rs7128883	0.27	0.27	0.253	0.282947	0.2903	0.2331	0.2781	0.2526	0.3712	0.29	0.27	0.25	0.26	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.024588	NA	NA	NA	NA	NA	0.268	NA	3.2097
1331	22	42031953	42031953	C	G	intronic	XRCC6	NA	NA	NA	intronic	ENSG00000196419	NA	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs132774	0.71	0.71	0.711	0.660343	0.7903	0.9097	0.4841	0.4894	0.6258	0.8	0.91	0.51	0.5	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.409787	NA	NA	NA	NA	NA	0.645	NA	3.2097
1331	10	96665664	96665664	G	T	intergenic	CYP2C19,CYP2C9	dist=52993;dist=32751	NA	NA	intergenic	ENSG00000225354,ENSG00000138109	dist=22564;dist=32764	NA	NA	NA	NA	10q23.33	NA	NA	NA	NA	rs61888410	0.07	0.07	0.049	0.048123	0.1243	0.002	0.0994	0.0083	0.0348	0.12	0.0035	0.12	0.02	NA	0.12	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.100757	2.100757	NA	NA	NA	NA	0.094	NA	3.2090334
1331	4	169812313	169812313	T	C	intronic	PALLD	NA	NA	NA	intronic	ENSG00000129116,ENSG00000145439	NA	NA	NA	NA	NA	4q32.3	NA	NA	NA	NA	rs6827082	0.75	0.75	0.739	0.726837	0.7913	0.9702	0.7032	0.4448	0.8078	0.81	0.96	0.69	0.45	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.082282	NA	NA	NA	NA	NA	0.638	NA	3.2087
1331	9	124073176	124073176	T	C	intronic	GSN	NA	NA	NA	intronic	ENSG00000148180	NA	NA	NA	NA	NA	9q33.2	NA	NA	NA	NA	rs306785	0.88	0.88	0.871	0.888978	0.7913	0.994	0.8588	0.8971	0.8916	0.78	1	0.86	0.9	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.062105	NA	NA	NA	NA	NA	0.848	NA	3.2087
1331	6	160131920	160131920	C	T	intergenic	SOD2,WTAP	dist=17567;dist=16110	NA	NA	intronic	ENSG00000112096	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs62437319	0.3	0.3	0.284	0.302516	0.4583	0.1349	0.4337	0.1551	0.4213	0.46	0.12	0.45	0.15	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.009755	NA	NA	NA	NA	NA	0.203	NA	3.2083667
1331	12	66911771	66911771	G	T	intronic	GRIP1	NA	NA	NA	intronic	ENSG00000155974	NA	NA	NA	NA	NA	12q14.3	NA	NA	NA	NA	rs11838180	0.24	0.24	0.225	0.247604	0.2734	0.1478	0.1902	0.3351	0.2464	0.26	0.16	0.2	0.33	0.2451	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.545188	NA	NA	0.273271	0.315518	NA	0.312	NA	3.208229
1331	3	158409262	158409262	C	T	UTR3	GFM1	NM_024996:c.*6C>T	NA	NA	UTR3	ENSG00000168827	ENST00000486715:c.*6C>T,ENST00000478254:c.*902C>T,ENST00000264263:c.*6C>T,ENST00000472383:c.*178C>T	NA	NA	NA	NA	3q25.32	NA	NA	NA	NA	rs1047355	0.37	0.37	0.392	0.409145	0.3847	0.1855	0.3386	0.6392	0.4039	0.39	0.16	0.32	0.62	0.3657	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.085386	NA	NA	0.374738	0.59419	NA	0.464	NA	3.2081954
1331	4	46967279	46967279	C	A	intronic	GABRA4	NA	NA	NA	intronic	ENSG00000109158	NA	NA	NA	NA	NA	4p12	NA	NA	NA	NA	rs2055943	0.26	0.26	0.255	0.229832	0.2793	0.3403	0.1441	0.1982	0.1687	0.28	0.33	0.16	0.22	0.2372	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.205539	NA	NA	0.275698	0.199501	NA	0.181	NA	3.207802
1331	4	104493370	104493370	G	A	intergenic	CENPE,TACR3	dist=373804;dist=17255	NA	NA	ncRNA_exonic	ENSG00000251571	NA	NA	NA	NA	NA	4q24	NA	NA	NA	NA	rs2588907	0.59	0.59	0.562	0.531949	0.7922	0.5149	0.6945	0.2572	0.5378	0.8	0.52	0.74	0.25	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.864066	NA	NA	NA	NA	NA	0.558	NA	3.2078
1331	15	100246834	100246834	T	G	intronic	MEF2A	NA	NA	NA	intronic	ENSG00000068305	NA	NA	NA	NA	NA	15q26.3	NA	NA	NA	NA	rs325409	0.63	0.63	0.608	0.61242	0.7922	0.7103	0.6369	0.2057	0.8589	0.79	0.73	0.68	0.22	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.472206	NA	NA	NA	NA	NA	0.652	NA	3.2078
1331	19	6262355	6262355	C	T	intronic	MLLT1	NA	NA	NA	intronic	ENSG00000130382	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs2227261	0.27	0.27	0.269	0.294329	0.2604	0.0278	0.3501	0.497	0.2904	0.26	0.03	0.34	0.5	0.2664	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.127085	NA	NA	0.265698	0.447118	NA	0.319	NA	3.207502
1331	1	158389659	158389659	T	C	downstream	OR10K2	NA	NA	NA	downstream	ENSG00000180708	NA	NA	NA	NA	NA	1q23.1	NA	NA	NA	NA	rs58605957	0.3	0.3	0.263	0.280551	0.4592	0.1687	0.2695	0.2186	0.3037	0.48	0.19	0.29	0.18	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.721168	NA	NA	NA	NA	NA	0.29	NA	3.2074666
1331	2	173861340	173861340	G	A	intronic	RAPGEF4	NA	NA	NA	intronic	ENSG00000091428	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	rs2290374	0.46	0.46	0.441	0.420527	0.4036	0.7877	0.3487	0.2428	0.3507	0.37	0.79	0.38	0.26	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.290216	NA	NA	0.389063	0.254335	NA	0.268	NA	3.207337
1331	6	109190267	109190267	A	T	intronic	ARMC2	NA	NA	NA	intronic	ENSG00000118690	NA	NA	NA	NA	NA	6q21	NA	NA	NA	NA	rs2806362	0.77	0.77	0.763	0.775759	0.7932	0.7927	0.8559	0.6657	0.8323	0.79	0.79	0.82	0.69	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.72804	3.72804	NA	NA	NA	NA	0.688	NA	3.2068
1331	12	48142418	48142418	C	G	intronic	RAPGEF3	NA	NA	NA	intronic	ENSG00000079337	NA	NA	NA	NA	NA	12q13.11	NA	NA	NA	NA	rs757281	0.83	0.83	0.813	0.807308	0.7932	0.9494	0.8573	0.7648	0.6973	0.78	0.93	0.9	0.74	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.381356	NA	NA	NA	NA	NA	0.826	NA	3.2068
1331	12	442620	442620	C	T	intronic	KDM5A	NA	NA	NA	intronic	ENSG00000073614	NA	NA	NA	NA	NA	12p13.33	NA	NA	NA	NA	rs4980885	0.35	0.35	0.322	0.351637	0.2316	0.506	0.3199	0.3306	0.3671	0.24	0.5	0.32	0.36	0.3098	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.741736	NA	NA	0.251938	0.308939	NA	0.283	NA	3.206662
1331	11	64883864	64883864	A	G	downstream	TM7SF2,ZNHIT2	NA	NA	NA	upstream;downstream	ENSG00000255173;ENSG00000149809,ENSG00000174276	NA	NA	NA	NA	NA	11q13.1	NA	Name=USF2	NA	NA	rs1706937	0.48	0.48	0.486	0.448283	0.4901	0.6597	0.317	0.3094	0.4683	0.51	0.67	0.35	0.32	0.4757	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.80512	NA	NA	0.494298	0.341364	NA	0.529	NA	3.2065686
1331	14	106926176	106926176	C	T	intergenic	LINC00226,LINC00221	dist=181210;dist=12279	NA	NA	downstream	ENSG00000232216	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs7401517	0.27	0.27	0.238	NA	NA	NA	NA	NA	NA	0.27	0.16	0.21	0.43	0.2935	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.184391	NA	NA	NA	NA	NA	0.275	NA	3.2065
1331	10	81318621	81318621	C	T	intronic	SFTPA2	NA	NA	NA	intronic	ENSG00000185303	NA	NA	NA	NA	NA	10q22.3	NA	NA	NA	NA	rs17884396	0.3	0.3	0.314	0.346246	0.2505	0.1657	0.2911	0.5635	0.3763	0.25	0.17	0.3	0.53	0.296	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.327392	NA	NA	0.247439	0.50227	NA	0.217	NA	3.206061
1331	14	106926167	106926167	G	A	intergenic	LINC00226,LINC00221	dist=181201;dist=12288	NA	NA	downstream	ENSG00000232216	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs7401540	0.27	0.27	0.251	NA	NA	NA	NA	NA	NA	0.27	0.16	0.21	0.42	0.294	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.3092	NA	NA	NA	NA	NA	0.275	NA	3.206
1331	2	97693966	97693966	A	G	intergenic	FAM178B,FAHD2B	dist=41665;dist=55357	NA	NA	ncRNA_intronic	ENSG00000144188	NA	NA	NA	NA	NA	2q11.2	NA	NA	NA	NA	rs1669771	0.51	0.51	NA	0.438698	0.7942	0.3591	0.4813	0.3079	0.3016	0.77	0.34	0.52	0.31	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.864026	NA	NA	NA	NA	ID=COSN166206;OCCURENCE=1(breast)	0.246	NA	3.2058
1331	22	31532568	31532568	G	C	intronic	PLA2G3	NA	NA	NA	intronic	ENSG00000100078	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs757872	0.73	0.73	0.719	0.737819	0.7942	0.7153	0.804	0.5431	0.9192	0.8	0.72	0.78	0.59	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.961378	NA	NA	NA	NA	NA	0.725	NA	3.2058
1331	5	178581797	178581797	C	T	intronic	ADAMTS2	NA	NA	NA	intronic	ENSG00000087116	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs2278222	0.22	0.22	0.19	0.23123	0.2485	0.3244	0.2925	0.0446	0.3262	0.24	0.32	0.26	0.04	0.3113	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.108396	NA	NA	0.23476	0.075125	NA	0.152	NA	3.20544
1331	1	235922228	235922228	T	C	intronic	LYST	NA	NA	NA	intronic	ENSG00000143669	NA	NA	NA	NA	NA	1q42.3	NA	NA	NA	NA	rs3738519	0.24	0.24	0.234	0.230032	0.2813	0.0248	0.2003	0.4198	0.1534	0.28	0.03	0.22	0.42	0.2489	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.274954	NA	NA	0.264419	0.425329	NA	0.304	NA	3.205381
1331	14	106926145	106926145	C	G	intergenic	LINC00226,LINC00221	dist=181179;dist=12310	NA	NA	downstream	ENSG00000232216	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs7401516	0.27	0.27	0.258	NA	NA	NA	NA	NA	NA	0.27	0.15	0.22	0.44	0.2947	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.583894	NA	NA	NA	NA	NA	0.261	NA	3.2053
1332	20	13029790	13029790	C	T	intronic	SPTLC3	NA	NA	NA	intronic	ENSG00000172296	NA	NA	NA	NA	NA	20p12.1	NA	NA	NA	NA	rs6078899	0.27	0.27	0.256	0.298323	0.2346	0.3889	0.33	0.1241	0.4836	0.24	0.45	0.27	0.11	0.2998	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.505321	NA	NA	0.260698	0.142306	NA	0.181	NA	3.204902
1332	6	160201677	160201677	G	A	intronic	TCP1	NA	NA	NA	intronic	ENSG00000120438	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs3818300	0.74	0.74	0.725	0.761981	0.7952	0.5903	0.8746	0.7443	0.8487	0.8	0.57	0.87	0.73	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.671157	NA	NA	NA	NA	NA	0.638	NA	3.2048
1332	17	21828293	21828293	T	A	intergenic	FAM27L,FLJ36000	dist=1794;dist=75769	NA	NA	upstream	ENSG00000265567	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs34862186	0.32	0.32	0.293	0.30631	0.2952	0.5873	0.3775	0.0711	0.2955	0.3	0.56	0.33	0.09	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.112461	NA	NA	NA	NA	NA	0.283	NA	3.2048
1332	21	43248418	43248418	A	G	intronic	PRDM15	NA	NA	NA	intronic	ENSG00000141956	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs28655031	0.71	0.71	0.691	0.702676	0.7952	0.6766	0.7723	0.6309	0.682	0.81	0.65	0.78	0.6	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.096251	NA	NA	NA	NA	NA	0.514	NA	3.2048
1332	5	145509573	145509573	G	A	intronic	LARS	NA	NA	NA	intronic	ENSG00000133706	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs11953517	0.2	0.2	0.166	0.181709	0.2525	0.1984	0.3775	0.0076	0.1881	0.25	0.2	0.3	0.02	0.2639	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.893591	NA	NA	0.278837	0.060145	ID=COSM149965;OCCURENCE=1(stomach)	0.268	NA	3.204763
1332	8	10584212	10584212	C	T	intronic	SOX7	NA	NA	NA	intronic	ENSG00000171056,ENSG00000258724	NA	NA	NA	NA	NA	8p23.1	NA	NA	Name=6	NA	rs10100209	0.64	0.64	0.657	0.635982	0.6093	0.4256	0.6268	0.8585	0.5859	0.62	0.47	0.65	0.86	0.5955	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.762375	NA	NA	0.590486	0.811308	NA	0.601	NA	3.204714
1332	19	56719822	56719822	G	T	intergenic	ZSCAN5B,ZSCAN5A	dist=15401;dist=12857	NA	NA	exonic	ENSG00000204532	NA	synonymous SNV	ENSG00000204532:ENST00000376267:exon4:c.G744T:p.G248G,ENSG00000204532:ENST00000534327:exon5:c.G744T:p.G248G	NA	NA	19q13.43	NA	NA	NA	NA	rs1865101	0.67	0.67	0.609	0.666134	0.6541	0.6954	0.719	0.652	0.6299	0.66	0.7	0.68	0.63	0.6413	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.817595	NA	NA	NA	NA	ID=COSM148771;OCCURENCE=1(stomach)	0.601	NA	3.2046
1332	19	15881751	15881751	A	C	ncRNA_intronic	CYP4F24P	NA	NA	NA	ncRNA_intronic	ENSG00000267594	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs8112713	0.65	0.65	0.642	0.657149	0.7614	0.3313	0.5965	0.8132	0.7178	0.76	0.35	0.65	0.83	0.7007	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.952287	NA	NA	NA	NA	NA	0.696	NA	3.2045666
1332	17	30696292	30696292	C	T	intronic	ZNF207	NA	NA	NA	intronic	ENSG00000010244	NA	NA	NA	NA	NA	17q11.2	NA	NA	Name=2	NA	rs2286645	0.51	0.51	0.515	0.516773	0.6372	0.1071	0.549	0.7421	0.4877	0.65	0.09	0.56	0.75	0.5513	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.183684	NA	NA	0.606977	0.719473	ID=COSN165386;OCCURENCE=1(NS)	0.565	NA	3.204523
1332	10	123719835	123719835	T	A	intronic	NSMCE4A	NA	NA	NA	UTR3	ENSG00000107672	ENST00000538652:c.*30A>T	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs10887033	0.31	0.31	0.309	0.325879	0.2833	0.2897	0.3559	0.2829	0.4438	0.29	0.31	0.38	0.3	0.3744	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.167447	2.167447	NA	0.304474	0.267045	NA	0.471	NA	3.2044927
1332	17	72859078	72859078	A	G	intronic	FDXR	NA	NA	NA	intronic	ENSG00000161513	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs690371	0.32	0.32	0.285	0.297724	0.2664	0.4732	0.1844	0.2806	0.2526	0.28	0.49	0.19	0.29	0.2694	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.497178	1.497178	NA	0.259884	0.270767	NA	0.283	NA	3.204316
1332	7	83592491	83592491	T	C	intronic	SEMA3A	NA	NA	NA	intronic	ENSG00000075213	NA	NA	NA	NA	NA	7q21.11	NA	NA	NA	NA	rs7809708	0.22	0.22	0.235	0.215455	0.2913	0.0427	0.2017	0.3374	0.1605	0.28	0.04	0.25	0.33	0.2309	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.506693	1.506693	NA	0.273488	0.307989	NA	0.341	NA	3.204312
1332	9	137982232	137982232	T	G	intronic	OLFM1	NA	NA	NA	intronic	ENSG00000130558	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs56337838	NA	NA	NA	0.434904	0.3698	0.5288	0.2867	0.4728	0.4591	NA	NA	NA	NA	0.426	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.254829	NA	NA	NA	NA	NA	0.435	NA	3.2042
1332	6	32188099	32188099	C	T	intronic	NOTCH4	NA	NA	NA	intronic	ENSG00000204301	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs430916	0.2	0.2	0.186	0.182708	0.2823	0.1339	0.2104	0.115	0.2025	0.27	0.13	0.24	0.12	0.2511	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.047339	NA	NA	0.262442	0.130504	NA	0.268	NA	3.204158
1332	18	23901198	23901198	G	A	intronic	TAF4B	NA	NA	NA	intronic	ENSG00000141384	NA	NA	NA	NA	NA	18q11.2	NA	NA	NA	NA	rs2276407	0.15	0.15	0.143	0.128395	0.2883	0.0565	0.1369	0.0779	0.1002	0.29	0.05	0.13	0.08	0.2221	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.399775	NA	NA	0.285767	0.109273	NA	0.188	NA	3.203833
1332	18	43248504	43248504	T	C	intronic	SLC14A2	NA	NA	NA	intronic	ENSG00000132874	NA	NA	NA	NA	NA	18q12.3	NA	NA	NA	NA	rs6507631	0.7	0.7	0.688	0.703474	0.7962	0.4226	0.755	0.8245	0.6973	0.8	0.41	0.77	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.076529	NA	NA	NA	NA	NA	0.594	NA	3.2038
1332	18	43248509	43248509	T	C	intronic	SLC14A2	NA	NA	NA	intronic	ENSG00000132874	NA	NA	NA	NA	NA	18q12.3	NA	NA	NA	NA	rs10451385	0.64	0.64	0.61	0.634585	0.7962	0.4226	0.7435	0.5696	0.6973	0.8	0.41	0.76	0.57	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.082442	NA	NA	NA	NA	NA	0.529	NA	3.2038
1332	18	54363747	54363747	A	G	intronic	WDR7	NA	NA	NA	intronic	ENSG00000091157	NA	NA	NA	NA	NA	18q21.31	NA	NA	NA	NA	rs1468742	0.58	0.58	0.513	0.556909	0.7962	0.5923	0.6009	0.1626	0.7761	0.81	0.57	0.67	0.16	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.225538	NA	NA	NA	NA	NA	0.551	NA	3.2038
1332	5	145533418	145533418	T	A	intronic	LARS	NA	NA	NA	intronic	ENSG00000133706	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs34342344	0.2	0.2	0.172	0.181709	0.2525	0.1984	0.3775	0.0076	0.1881	0.25	0.2	0.3	0.02	0.2651	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.114788	NA	NA	0.278605	0.059918	ID=COSN167587;OCCURENCE=1(large_intestine)	0.268	NA	3.203795
1332	6	70916998	70916998	G	A	UTR3	COL19A1	NM_001858:c.*20G>A	NA	NA	UTR3	ENSG00000082293	ENST00000322773:c.*20G>A,ENST00000393344:c.*20G>A	NA	NA	NA	NA	6q13	NA	NA	NA	NA	rs1736	0.31	0.31	0.31	0.321885	0.3936	0.131	0.33	0.3449	0.408	0.39	0.15	0.33	0.34	0.3521	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.103148	NA	NA	0.384159	0.34975	NA	0.355	NA	3.2034744
1332	5	145538924	145538924	T	A	intronic	LARS	NA	NA	NA	intronic	ENSG00000133706	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs13178516	0.2	0.2	0.163	0.181709	0.2525	0.1984	0.3775	0.0076	0.1881	0.25	0.2	0.3	0.02	0.265	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.859332	NA	NA	0.279045	0.0604	ID=COSN167588;OCCURENCE=2(large_intestine)	0.254	NA	3.203455
1332	3	124374405	124374405	A	C	intronic	KALRN	NA	NA	NA	intronic	ENSG00000160145	NA	NA	NA	NA	NA	3q21.2	NA	NA	NA	NA	rs4677939	0.28	0.28	0.246	0.266573	0.2763	0.4048	0.255	0.2118	0.1963	0.27	0.39	0.26	0.16	0.261	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.618641	NA	NA	0.259419	0.178847	NA	0.21	NA	3.203281
1332	5	149827098	149827098	G	A	intronic	RPS14	NA	NA	NA	intronic	ENSG00000164587	NA	NA	NA	NA	NA	5q33.1	NA	NA	NA	NA	rs3797622	0.24	0.24	0.226	0.268371	0.2575	0.2669	0.2161	0.2027	0.407	0.26	0.28	0.23	0.2	0.2723	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.284508	NA	NA	0.266977	0.215161	NA	0.341	NA	3.203223
1332	9	23681867	23681867	G	A	intergenic	FLJ35282,ELAVL2	dist=857655;dist=8236	NA	NA	upstream	ENSG00000226626	NA	NA	NA	NA	NA	9p21.3	NA	NA	NA	NA	rs10966017	0.19	0.19	0.148	0.147165	0.2972	0.1161	0.2723	0.0204	0.1074	0.3	0.11	0.3	0.03	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.080721	NA	NA	NA	NA	NA	0.145	NA	3.2028
1332	11	122489782	122489782	A	G	intergenic	MIR100HG,UBASH3B	dist=416012;dist=36616	NA	NA	ncRNA_exonic	ENSG00000254935	NA	NA	NA	NA	NA	11q24.1	NA	NA	NA	NA	rs10750214	0.79	0.79	0.76	0.78754	0.7972	0.7411	0.8271	0.7943	0.7883	0.8	0.75	0.81	0.81	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.887696	NA	NA	NA	NA	NA	0.833	NA	3.2028
1332	12	47163306	47163306	C	T	intronic	SLC38A4	NA	NA	NA	intronic	ENSG00000139209	NA	NA	NA	NA	NA	12q13.11	NA	NA	NA	NA	rs180403	0.6	0.6	0.575	0.596446	0.7972	0.4891	0.6455	0.4062	0.7229	0.77	0.49	0.63	0.43	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.102611	NA	NA	NA	NA	NA	0.616	NA	3.2028
1332	13	102344867	102344867	A	G	intronic	ITGBL1	NA	NA	NA	intronic	ENSG00000198542	NA	NA	NA	NA	NA	13q33.1	NA	NA	NA	NA	rs981073	0.82	0.82	0.806	0.839058	0.7972	0.9732	0.8703	0.6944	0.9172	0.79	0.97	0.85	0.68	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.449854	NA	NA	NA	NA	NA	0.862	NA	3.2028
1332	21	43246223	43246223	C	T	intronic	PRDM15	NA	NA	NA	intronic	ENSG00000141956	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs28559700	0.74	0.74	0.729	0.741014	0.7972	0.6766	0.7925	0.761	0.6861	0.81	0.65	0.8	0.72	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.414216	NA	NA	NA	NA	NA	0.667	NA	3.2028
1332	18	28923983	28923983	A	C	intronic	DSG1	NA	NA	NA	ncRNA_intronic	ENSG00000266729	NA	NA	NA	NA	NA	18q12.1	NA	NA	NA	NA	rs11660224	NA	NA	0.008	0.461262	0.5537	0.251	0.366	0.5151	0.5777	NA	NA	NA	NA	0.5039	0.073	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.224148	NA	NA	0.073091	0.069451	NA	NA	NA	3.2026423
1332	3	108174537	108174537	T	C	intronic	MYH15	NA	NA	NA	intronic	ENSG00000144821	NA	NA	NA	NA	NA	3q13.13	NA	NA	NA	NA	rs3957557	0.15	0.15	0.121	0.105631	0.2992	NA	0.1888	0.0212	0.0706	0.31	NA	0.22	0.04	0.2102	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.603355	NA	NA	0.288086	0.064935	NA	0.188	NA	3.202514
1332	11	3436356	3436356	A	G	intergenic	LOC650368,TRPC2	dist=5978;dist=211334	NA	NA	ncRNA_intronic	ENSG00000166492	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs6578350	0.88	0.88	0.88	0.88119	0.7982	0.9722	0.8689	0.8888	0.8712	0.81	0.98	0.83	0.9	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.84289	NA	NA	NA	NA	NA	0.754	NA	3.2018
1332	11	20959482	20959482	G	C	intronic	NELL1	NA	NA	NA	intronic	ENSG00000165973	NA	NA	NA	NA	NA	11p15.1	NA	NA	NA	NA	rs1880086	0.68	0.68	0.642	0.66254	0.7982	0.755	0.7392	0.351	0.7945	0.8	0.77	0.73	0.35	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.132733	NA	NA	NA	NA	NA	0.688	NA	3.2018
1332	11	117030581	117030581	T	A	intronic	PAFAH1B2	NA	NA	NA	intronic	ENSG00000168092	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs1871757	0.65	0.65	0.654	0.613818	0.7982	0.4554	0.696	0.6195	0.5215	0.8	0.47	0.72	0.59	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.505897	NA	NA	NA	NA	NA	0.688	NA	3.2018
1332	5	147498523	147498523	T	C	intronic	SPINK5	NA	NA	NA	intronic	ENSG00000133710	NA	NA	NA	NA	NA	5q32	Score=903;Name=V$EVI1_06	NA	NA	NA	rs3764926	0.51	0.51	0.491	0.508786	0.5924	0.4792	0.6398	0.3903	0.5204	0.56	0.46	0.59	0.43	0.5892	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.116672	NA	NA	0.616723	0.437097	NA	0.478	NA	3.201677
1332	8	28600572	28600572	G	C	intronic	EXTL3	NA	NA	NA	intronic	ENSG00000012232	NA	NA	NA	NA	NA	8p21.1	NA	NA	NA	NA	rs2048369	0.24	0.24	0.225	0.224441	0.2783	0.3472	0.1974	0.087	0.2474	0.28	0.33	0.23	0.08	0.2542	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.686629	NA	NA	0.26593	0.108034	NA	0.312	NA	3.20157
1332	22	23540414	23540414	T	G	intronic	BCR	NA	NA	NA	intronic	ENSG00000186716	NA	NA	NA	NA	NA	22q11.23	NA	NA	NA	NA	rs2071431	0.32	0.32	0.276	0.302716	0.2406	0.3581	0.3674	0.3533	0.1953	0.26	0.38	0.3	0.36	0.2934	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.279461	NA	NA	0.26444	0.335616	NA	0.275	NA	3.20156
1332	11	78189558	78189558	T	C	intronic	NARS2	NA	NA	NA	intronic	ENSG00000137513	NA	NA	NA	NA	NA	11q14.1	NA	NA	NA	NA	rs4944202	0.3	0.3	0.323	0.298123	0.1938	0.4196	0.3458	0.2867	0.2618	0.2	0.43	0.29	0.32	0.4206	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.296533	NA	NA	0.184059	0.275238	NA	0.181	NA	3.201541
1332	4	47680085	47680085	T	G	intronic	CORIN	NA	NA	NA	intronic	ENSG00000145244	NA	NA	NA	NA	NA	4p12	NA	NA	NA	NA	rs2271037	0.45	0.45	0.446	0.443091	0.2545	0.6091	0.3069	0.7247	0.182	0.26	0.6	0.29	0.67	0.3118	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.581149	NA	NA	0.232209	0.646618	NA	0.391	NA	3.201491
1332	19	41919944	41919944	A	C	intronic	BCKDHA	NA	NA	NA	intronic	ENSG00000248098,ENSG00000255730	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs3213861	0.61	0.61	0.618	0.616014	0.5924	0.4306	0.4885	0.8548	0.5992	0.58	0.45	0.57	0.86	0.5989	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.529162	2.529162	NA	0.607583	0.809805	NA	0.688	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000079239.1;CLNDSDB=.;CLNDSDBID=.	3.201117
1332	19	21022198	21022198	G	A	intergenic	ZNF626,ZNF85	dist=177796;dist=83861	NA	NA	ncRNA_intronic	ENSG00000269373	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs2547180	0.71	0.71	0.691	0.678315	0.7992	0.5952	0.6081	0.6649	0.7076	0.83	0.62	0.64	0.68	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.619123	NA	NA	NA	NA	NA	0.725	NA	3.2008
1332	7	1590443	1590443	T	C	intronic	TMEM184A	NA	NA	NA	intronic	ENSG00000164855	NA	NA	NA	NA	NA	7p22.3	NA	Name=Pol2	NA	NA	rs2304361	0.64	0.64	0.622	0.609225	0.6252	0.6915	0.6542	0.5613	0.5409	0.63	0.71	0.65	0.57	0.602	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.156035	NA	NA	0.572096	0.571823	NA	0.746	NA	3.200704
1332	9	35707338	35707338	G	A	intronic	TLN1	NA	NA	NA	intronic	ENSG00000137076	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs55810625	0.24	0.24	0.215	0.201677	0.2694	0.3383	0.2695	0.0204	0.1881	0.26	0.37	0.28	0.02	0.2497	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.153925	NA	NA	0.280233	0.070132	NA	0.188	NA	3.200667
1332	3	184071017	184071017	G	A	intronic	CLCN2	NA	NA	NA	intronic	ENSG00000114859,ENSG00000145191	NA	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs41266265	0.15	0.15	0.12	0.148962	0.2853	0.0516	0.1859	0.0227	0.2536	0.26	0.02	0.25	0.03	0.224	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.792811	NA	NA	0.290233	0.060599	NA	NA	NA	3.200467
1332	19	54742999	54742999	C	A	intronic	LILRA6	NA	NA	NA	intronic	ENSG00000170889,ENSG00000204577,ENSG00000244482	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs8100079	0.3	0.3	0.289	0.336462	0.2763	0.0556	0.268	0.7269	0.2086	0.25	0.05	0.26	0.7	0.2658	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.178776	NA	NA	0.257502	0.640661	NA	0.29	NA	3.200398
1332	1	152552461	152552461	C	A	intronic	LCE3D	NA	NA	NA	intronic	ENSG00000163202	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs4845313	0.23	0.23	0.183	0.232228	0.2535	0.2956	0.3012	0.0666	0.32	0.26	0.3	0.28	0.07	0.2798	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.057723	NA	NA	0.26686	0.113028	ID=COSN163242;OCCURENCE=1(breast)	0.116	NA	3.19984
1332	3	194346544	194346544	T	A	intronic	TMEM44	NA	NA	NA	intronic	ENSG00000145014	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs1773191	0.83	0.83	0.809	0.832668	0.8002	0.9633	0.7925	0.7186	0.9141	0.8	0.95	0.8	0.75	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.510219	NA	NA	NA	NA	NA	0.768	NA	3.1998
1332	3	194346553	194346553	T	C	intronic	TMEM44	NA	NA	NA	intronic	ENSG00000145014	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs1773190	0.83	0.83	0.821	0.832668	0.8002	0.9633	0.7925	0.7186	0.9141	0.81	0.96	0.8	0.75	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.346048	NA	NA	NA	NA	NA	0.768	NA	3.1998
1332	17	76867185	76867185	G	T	intronic	TIMP2	NA	NA	NA	intronic	ENSG00000035862,ENSG00000178404	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs55743137	0.69	0.69	0.672	0.646166	0.8002	0.5308	0.7939	0.6528	0.4928	0.8	0.55	0.78	0.62	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.072565	NA	NA	NA	NA	NA	0.659	NA	3.1998
1332	17	25887530	25887530	G	C	intronic	KSR1	NA	NA	NA	intronic	ENSG00000141068	NA	NA	NA	NA	NA	17q11.2	Score=791;Name=V$ISRE_01	NA	NA	NA	rs2945397	0.6	0.6	0.573	0.582268	0.6233	0.5982	0.696	0.503	0.5501	0.62	0.62	0.66	0.5	0.6026	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.731812	NA	NA	0.574335	0.505137	NA	0.493	NA	3.199765
1332	17	73571030	73571030	A	G	UTR3	LLGL2	NM_004524:c.*43A>G,NM_001031803:c.*71A>G	NA	NA	UTR3	ENSG00000073350	ENST00000167462:c.*43A>G,ENST00000392550:c.*71A>G,ENST00000578638:c.*1863A>G	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs1042861	0.45	0.45	0.479	0.464657	0.3738	0.2639	0.3386	0.9039	0.2607	0.38	0.22	0.36	0.89	0.3733	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.727135	NA	NA	0.386512	0.815933	NA	0.478	NA	3.1997214
1332	17	61908316	61908316	G	A	intronic	PSMC5	NA	NA	NA	intronic	ENSG00000087191	NA	NA	NA	NA	NA	17q23.3	NA	NA	NA	NA	rs7220892	0.25	0.25	0.261	0.239816	0.2694	0.0506	0.2032	0.4463	0.1513	0.27	0.05	0.2	0.48	0.2481	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.465567	NA	NA	0.282907	0.370404	ID=COSN165499;OCCURENCE=1(breast)	0.239	NA	3.199593
1332	4	154191710	154191710	G	A	intronic	TRIM2	NA	NA	NA	intronic	ENSG00000109654	NA	NA	NA	NA	NA	4q31.3	NA	NA	NA	NA	rs1470104	0.18	0.18	0.157	0.183307	0.2714	0.1329	0.1513	0.0295	0.3753	0.29	0.15	0.17	0.04	0.251	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.904797	NA	NA	0.278023	0.067862	NA	0.232	NA	3.199577
1332	12	124101041	124101041	T	G	intronic	DDX55	NA	NA	NA	intronic	ENSG00000111364	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs56675602	0.23	0.23	0.24	0.251597	0.2664	0.0159	0.2205	0.4425	0.2434	0.27	0.02	0.21	0.46	0.2579	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.577176	1.577176	NA	0.276395	0.41035	NA	0.246	NA	3.199305
1332	15	90172834	90172834	T	G	intronic	KIF7	NA	NA	NA	UTR3	ENSG00000140534	ENST00000561095:c.*270T>G	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs72750748	0.26	0.26	0.248	0.267173	0.331	0.3958	0.2839	0.0499	0.3507	0.34	0.35	0.25	0.05	0.3031	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.721884	NA	NA	0.333566	0.086364	NA	0.254	NA	3.1990007
1332	1	76771475	76771475	G	T	intronic	ST6GALNAC3	NA	NA	NA	intronic	ENSG00000184005	NA	NA	NA	NA	NA	1p31.1	NA	NA	NA	NA	rs10782610	0.7	0.7	0.674	0.697484	0.8012	0.7103	0.7781	0.4841	0.8088	0.81	0.69	0.79	0.49	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.562934	NA	NA	NA	NA	NA	0.717	NA	3.1988
1332	10	81053475	81053475	G	A	intronic	ZMIZ1	NA	NA	NA	intronic	ENSG00000108175	NA	NA	NA	NA	NA	10q22.3	NA	NA	NA	NA	rs1250560	0.47	0.47	0.46	0.474641	0.3668	0.6538	0.4063	0.4342	0.5041	0.37	0.7	0.41	0.4	0.4346	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.114961	NA	0.14	NA	NA	NA	0.362	NA	3.1986
1332	14	77705726	77705726	C	T	intronic	TMEM63C	NA	NA	NA	intronic	ENSG00000165548	NA	NA	NA	NA	NA	14q24.3	NA	NA	NA	NA	rs4899646	0.22	0.22	0.199	0.201677	0.2813	0.1597	0.3156	0.1551	0.1452	0.28	0.17	0.3	0.14	0.2465	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5546	NA	NA	0.273872	0.163226	NA	0.159	NA	3.198328
1332	17	80828303	80828303	G	A	intronic	TBCD	NA	NA	NA	intronic	ENSG00000141556	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs3744160	0.29	0.29	0.282	0.283347	0.2823	0.4782	0.255	0.1172	0.3282	0.27	0.46	0.28	0.12	0.2673	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.245919	NA	NA	0.252136	0.129665	NA	0.304	NA	3.198264
1332	12	10147850	10147850	T	C	intronic	CLEC1B	NA	NA	NA	intronic	ENSG00000165682	NA	NA	NA	NA	NA	12p13.2	NA	NA	NA	NA	rs521040	0.28	0.28	0.29	0.319688	0.2594	0.2411	0.1888	0.4085	0.4356	0.26	0.22	0.23	0.42	0.2859	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.316361	1.316361	NA	0.256548	0.390296	NA	0.362	NA	3.198152
1332	1	17597721	17597721	A	G	intronic	PADI3	NA	NA	NA	intronic	ENSG00000142619	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs4595409	0.28	0.28	0.268	0.295128	0.2684	0.1498	0.2651	0.4259	0.317	0.27	0.15	0.28	0.45	0.2788	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.299421	NA	NA	0.254829	0.369031	NA	0.29	NA	3.197971
1332	5	33637596	33637596	G	A	intronic	ADAMTS12	NA	NA	NA	intronic	ENSG00000151388	NA	NA	NA	NA	NA	5p13.3	NA	NA	NA	NA	rs4076945	0.67	0.67	0.662	0.595048	0.8022	0.6587	0.7003	0.3744	0.5399	0.81	0.66	0.73	0.41	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.873537	NA	NA	NA	NA	NA	0.58	NA	3.1978
1332	6	54095423	54095423	T	C	intronic	MLIP	NA	NA	NA	intronic	ENSG00000146147	NA	NA	NA	NA	NA	6p12.1	NA	NA	NA	NA	rs816384	0.69	0.69	0.648	0.660144	0.8022	0.7986	0.7435	0.3056	0.7914	0.81	0.8	0.74	0.33	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.637294	1.637294	NA	NA	NA	NA	0.63	NA	3.1978
1332	22	42073134	42073134	C	T	intronic	NHP2L1	NA	NA	NA	intronic	ENSG00000100138	NA	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs1811113	0.84	0.84	0.876	0.823882	0.8022	0.9365	0.5893	0.9788	0.6871	0.81	0.94	0.58	0.97	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.622552	NA	NA	NA	NA	NA	0.862	NA	3.1978
1332	16	55890398	55890398	G	C	intronic	CES5A	NA	NA	NA	intronic	ENSG00000159398	NA	NA	NA	NA	NA	16q12.2	NA	NA	NA	NA	rs9937572	0.36	0.36	0.385	0.414137	0.2634	0.3958	0.2219	0.5832	0.4959	0.27	0.38	0.25	0.57	0.3047	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.371233	NA	NA	0.234186	0.517061	NA	0.435	NA	3.197714
1332	2	905967	905967	A	G	intergenic	LOC339822,SNTG2	dist=41855;dist=40587	NA	NA	downstream	ENSG00000234796	NA	NA	NA	NA	NA	2p25.3	NA	Name=PU.1,GABP	NA	NA	rs6711173	0.76	0.76	0.787	0.773363	0.6203	0.9385	0.6931	0.7693	0.8231	0.64	0.95	0.68	0.78	0.6825	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.661763	NA	NA	NA	NA	NA	0.014	NA	3.1972
1332	16	20168833	20168833	T	C	intergenic	GPR139,GP2	dist=83733;dist=152978	NA	NA	intergenic	ENSG00000180269,ENSG00000263253	dist=83594;dist=51414	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs12447858	0.09	0.09	0.076	0.0822684	0.1362	0.001	0.1931	0.0552	0.0685	0.13	NA	0.18	0.06	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.009363	NA	NA	NA	NA	NA	0.13	NA	3.1971334
1332	19	39299362	39299362	A	G	intronic	LGALS4	NA	NA	NA	intronic	ENSG00000171747	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs1035525	0.34	0.34	0.343	0.384385	0.2376	0.3671	0.3674	0.559	0.3292	0.22	0.3	0.37	0.56	0.3017	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.305181	NA	NA	0.263837	0.524512	NA	0.384	NA	3.196863
1332	22	50724733	50724733	G	T	intronic	PLXNB2	NA	NA	NA	intronic	ENSG00000196576	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs55709850	0.28	0.28	0.27	0.243211	0.2853	0.2887	0.1614	0.3101	0.1207	0.28	0.33	0.17	0.29	0.2515	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.071806	NA	NA	0.266393	0.292244	NA	0.225	NA	3.196807
1332	8	125155706	125155706	G	A	intergenic	FER1L6,TMEM65	dist=23404;dist=167453	NA	NA	ncRNA_exonic	ENSG00000250727	NA	NA	NA	NA	NA	8q24.13	NA	NA	NA	NA	rs4316135	0.74	0.74	0.739	0.743411	0.8032	0.6538	0.6599	0.7769	0.7883	0.78	0.69	0.69	0.77	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.955709	NA	NA	NA	NA	NA	0.848	NA	3.1968
1332	19	21838351	21838351	A	G	intergenic	ZNF429,ZNF100	dist=117272;dist=68492	NA	NA	ncRNA_exonic	ENSG00000268278	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs7508059	0.79	0.79	0.76	0.774161	0.8032	0.8958	0.7839	0.584	0.8691	0.81	0.88	0.81	0.63	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.199464	NA	1	NA	NA	NA	0.848	NA	3.1968
1332	20	60712347	60712347	G	A	intronic	PSMA7	NA	NA	NA	intronic	ENSG00000101182	NA	NA	NA	NA	NA	20q13.33	NA	NA	NA	NA	rs2057168	0.65	0.65	0.625	0.598043	0.8032	0.7728	0.7392	0.143	0.7219	0.81	0.79	0.76	0.16	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.534497	NA	NA	NA	NA	NA	0.58	NA	3.1968
1332	8	94794620	94794620	C	T	intronic	TMEM67	NA	NA	NA	intronic	ENSG00000164953	NA	NA	NA	NA	NA	8q22.1	NA	NA	NA	NA	rs3097427	0.72	0.72	0.729	0.715056	0.5944	0.8224	0.647	0.8109	0.6472	0.59	0.82	0.65	0.83	0.6341	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.064486	NA	NA	0.574901	0.76305	NA	0.732	CLINSIG=other;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000082681.3;CLNDSDB=.;CLNDSDBID=.	3.196599
1332	19	54743004	54743004	A	T	intronic	LILRA6	NA	NA	NA	intronic	ENSG00000170889,ENSG00000204577,ENSG00000244482	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs8099961	0.3	0.3	0.291	0.334665	0.2763	0.0546	0.2666	0.7209	0.2096	0.25	0.05	0.25	0.7	0.2656	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.165226	NA	NA	0.262038	0.640661	NA	0.304	NA	3.196062
1332	12	129497958	129497958	T	C	intergenic	GLT1D1,TMEM132D	dist=28449;dist=58313	NA	NA	ncRNA_exonic	ENSG00000256581	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs544209	0.83	0.83	0.832	0.82528	0.8042	0.9127	0.8689	0.7489	0.8292	0.81	0.92	0.85	0.76	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.253986	NA	NA	NA	NA	NA	0.725	NA	3.1958
1332	12	129498317	129498317	A	G	intergenic	GLT1D1,TMEM132D	dist=28808;dist=57954	NA	NA	ncRNA_intronic	ENSG00000256581	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs519579	0.83	0.83	0.823	0.824681	0.8042	0.9127	0.8689	0.7466	0.8292	0.81	0.92	0.85	0.76	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.309971	NA	NA	NA	NA	NA	0.732	NA	3.1958
1332	15	42364652	42364652	G	A	intronic	PLA2G4D	NA	NA	NA	intronic	ENSG00000159337	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs1668587	0.82	0.82	0.8	0.8123	0.8042	0.8899	0.8646	0.7791	0.7485	0.8	0.88	0.85	0.74	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.030628	NA	NA	NA	NA	NA	0.754	NA	3.1958
1332	12	85439774	85439774	A	G	intronic	LRRIQ1	NA	NA	NA	intronic	ENSG00000133640	NA	NA	NA	NA	NA	12q21.31	NA	NA	NA	NA	rs2305102	0.21	0.21	0.176	0.206869	0.2604	0.2222	0.3127	0.0446	0.2802	0.26	0.22	0.3	0.05	0.2694	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.126964	NA	NA	0.275128	0.078338	NA	0.275	NA	3.195072
1333	18	15198343	15198343	G	T	intergenic	ANKRD30B,LOC644669	dist=345606;dist=115212	NA	NA	upstream	ENSG00000265015	NA	NA	NA	NA	NA	18p11.21	NA	NA	NA	NA	rs35269568	0.19	0.19	0.11	0.244409	0.3052	0.2252	0.1931	0.1006	0.4325	0.26	0.16	0.19	0.11	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.122485	NA	NA	NA	NA	NA	NA	NA	3.1948
1333	18	77170006	77170006	C	T	intronic	NFATC1	NA	NA	NA	intronic	ENSG00000131196	NA	NA	NA	NA	NA	18q23	NA	NA	NA	NA	rs182507	0.74	0.74	0.733	0.73103	0.8052	0.9355	0.7536	0.3714	0.9141	0.81	0.95	0.76	0.37	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.486469	NA	NA	NA	NA	NA	0.703	NA	3.1948
1333	7	35058177	35058177	A	G	intronic	DPY19L1	NA	NA	NA	intronic	ENSG00000173852	NA	NA	NA	NA	NA	7p14.2	NA	NA	NA	NA	rs10282006	0.18	0.18	0.143	0.164337	0.2644	0.1319	0.2248	0.0446	0.2137	0.27	0.14	0.23	0.05	0.2445	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.278168	NA	NA	0.296483	0.074917	NA	0.21	NA	3.194617
1333	9	139312996	139312996	C	T	intronic	PMPCA	NA	NA	NA	intronic	ENSG00000165688	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs10870160	0.2	0.2	0.185	0.197085	0.2734	0.1667	0.3069	0.0613	0.2556	0.27	0.16	0.26	0.07	0.2501	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.001053	NA	NA	0.281977	0.096232	NA	0.203	NA	3.194523
1333	19	54200922	54200922	T	C	upstream;downstream	MIR523;MIR525	NA	NA	NA	upstream;downstream	ENSG00000208016;ENSG00000207711	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs57056811	0.19	0.19	0.169	0.184904	0.2316	0.0704	0.1686	0.261	0.1636	0.23	0.05	0.19	0.29	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.267872	NA	NA	0.240729	0.276012	NA	0.232	NA	3.1943376
1333	6	131276473	131276473	A	G	intronic	EPB41L2	NA	NA	NA	intronic	ENSG00000079819	NA	NA	NA	NA	NA	6q23.2	NA	NA	NA	NA	rs45550834	0.59	0.59	NA	0.614217	0.3519	0.9335	0.5058	0.6785	0.545	0.36	0.92	0.44	0.65	0.4541	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.709248	NA	NA	NA	NA	NA	NA	NA	3.194
1333	6	168323664	168323664	A	G	intronic	MLLT4	NA	NA	NA	UTR3	ENSG00000130396	ENST00000497596:c.*1A>G	NA	NA	NA	NA	6q27	NA	NA	NA	NA	rs2301533	0.35	0.35	0.351	0.340256	0.3042	0.6002	0.3329	0.1286	0.4008	0.32	0.59	0.34	0.15	0.3525	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.720361	NA	NA	0.316163	0.15842	NA	0.232	NA	3.1938037
1333	1	165992288	165992288	T	A	intergenic	UCK2,FAM78B	dist=111433;dist=46968	NA	NA	downstream	ENSG00000226292	NA	NA	NA	NA	NA	1q24.1	NA	NA	NA	NA	rs7512427	0.18	0.18	0.175	0.19988	0.3062	0.0962	0.1859	0.1014	0.3405	0.3	0.09	0.19	0.11	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.44452	NA	NA	NA	NA	NA	0.181	NA	3.1938
1333	7	144707007	144707007	G	C	intergenic	TPK1,CNTNAP2	dist=173861;dist=1106446	NA	NA	upstream	ENSG00000214035	NA	NA	NA	NA	NA	7q35	NA	NA	NA	NA	rs10216247	0.24	0.24	0.238	0.232228	0.3062	0.2371	0.1787	0.2186	0.2076	0.31	0.23	0.2	0.19	NA	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.98765	NA	NA	NA	NA	NA	0.159	NA	3.1938
1333	21	47328990	47328990	T	G	intronic	PCBP3	NA	NA	NA	intronic	ENSG00000183570	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs9976042	0.9	0.9	0.909	0.913938	0.8062	0.997	0.8617	0.966	0.9059	0.8	0.99	0.87	0.95	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.011807	NA	NA	NA	NA	NA	0.884	NA	3.1938
1333	9	75782510	75782510	G	A	intronic	ANXA1	NA	NA	NA	intronic	ENSG00000135046	NA	NA	NA	NA	NA	9q21.13	NA	NA	Name=8	NA	rs1342017	0.48	0.48	0.457	0.457069	0.6312	0.1716	0.5288	0.5726	0.365	0.63	0.19	0.55	0.55	0.548	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.381904	1.381904	NA	0.627006	0.568089	NA	0.486	NA	3.193794
1333	10	21112111	21112111	A	T	intronic	NEBL	NA	NA	NA	intronic	ENSG00000078114	NA	NA	NA	NA	NA	10p12.31	NA	NA	NA	NA	rs11012353	0.28	0.28	0.198	0.302117	0.2644	0.4613	0.2219	0.18	0.3988	0.25	0.46	0.26	0.14	0.3235	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.099186	NA	NA	0.218692	0.147112	NA	0.188	NA	3.193408
1333	1	246490452	246490452	G	A	intronic	SMYD3	NA	NA	NA	intronic	ENSG00000185420	NA	NA	NA	NA	NA	1q44	NA	NA	Name=9	NA	rs3737247	0.47	0.47	0.449	0.432109	0.662	0.1716	0.5144	0.4478	0.3845	0.66	0.18	0.56	0.45	0.5208	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.023488	NA	NA	0.623837	0.47163	ID=COSN163502;OCCURENCE=1(breast)	0.377	NA	3.193363
1333	11	118952371	118952371	A	G	UTR3	VPS11	NM_021729:c.*38A>G	NA	NA	UTR3	ENSG00000160695	ENST00000300793:c.*38A>G	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs4614	0.34	0.34	0.349	0.356829	0.3608	0.2044	0.3343	0.4939	0.3405	0.35	0.17	0.35	0.52	0.3721	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.47714	NA	NA	0.407314	0.470416	NA	0.428	NA	3.1931194
1333	13	101721029	101721029	T	C	intronic	NALCN	NA	NA	NA	intronic	ENSG00000102452	NA	NA	NA	NA	NA	13q33.1	NA	NA	NA	NA	rs11616341	0.22	0.22	0.226	0.221246	0.2843	0.0069	0.2032	0.3722	0.1861	0.28	0.01	0.23	0.36	0.2425	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.956086	NA	NA	0.280116	0.362233	NA	0.29	NA	3.193084
1333	20	47256479	47256479	T	C	intronic	PREX1	NA	NA	NA	intronic	ENSG00000124126	NA	NA	NA	NA	NA	20q13.13	NA	NA	NA	NA	rs4611698	0.28	0.28	0.269	0.296925	0.2614	0.2927	0.3473	0.2073	0.4233	0.26	0.3	0.36	0.22	0.2855	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.375595	1.375595	NA	0.260116	0.215388	NA	0.283	NA	3.192984
1333	13	50299677	50299677	T	C	intronic	KPNA3	NA	NA	NA	intronic	ENSG00000102753	NA	NA	NA	NA	NA	13q14.2	NA	NA	NA	NA	rs2273817	0.17	0.17	0.164	0.173722	0.2763	0.0804	0.2824	0.0862	0.2055	0.27	0.06	0.25	0.09	0.2508	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.722366	3.722366	NA	0.28	0.117794	NA	0.188	NA	3.1929
1333	20	44181723	44181723	A	G	intronic	WFDC8	NA	NA	NA	intronic	ENSG00000158901	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs2294559	0.29	0.29	0.275	0.283347	0.4016	0.0585	0.3444	0.3707	0.2321	0.4	0.05	0.36	0.35	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.037742	NA	NA	0.405575	0.369292	NA	0.413	NA	3.192825
1333	9	21929590	21929590	G	T	intergenic	MTAP,C9orf53	dist=63621;dist=37548	NA	NA	ncRNA_exonic	ENSG00000264801	NA	NA	NA	NA	NA	9p21.3	NA	NA	NA	NA	rs2188125	0.56	0.56	0.519	0.525759	0.8072	0.4782	0.5159	0.2663	0.6431	0.81	0.46	0.59	0.25	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.166369	NA	NA	NA	NA	NA	0.551	NA	3.1928
1333	17	48155275	48155275	A	T	intronic	ITGA3	NA	NA	NA	intronic	ENSG00000005884	NA	NA	NA	NA	NA	17q21.33	NA	NA	NA	NA	rs11868159	0.55	0.55	0.554	0.478235	0.8072	0.2232	0.5346	0.4569	0.3916	0.82	0.26	0.6	0.46	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.011326	NA	NA	NA	NA	NA	0.551	NA	3.1928
1333	2	113877713	113877713	A	C	intronic	IL1RN	NA	NA	NA	intronic	ENSG00000136689	NA	NA	NA	NA	NA	2q13	NA	NA	NA	NA	rs878972	0.18	0.18	0.16	0.189696	0.2893	0.1181	0.3199	0.0182	0.3006	0.29	0.11	0.31	0.03	0.2457	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.080456	NA	NA	0.272442	0.055606	NA	0.239	NA	3.192558
1333	17	51902252	51902252	C	T	exonic	KIF2B	NA	synonymous SNV	KIF2B:NM_032559:exon1:c.C1858T:p.L620L	exonic	ENSG00000141200	NA	synonymous SNV	ENSG00000141200:ENST00000268919:exon1:c.C1858T:p.L620L	NA	NA	17q22	NA	NA	NA	NA	rs3826355	0.81	0.81	0.817	0.760184	0.834	0.8145	0.7608	0.789	0.589	0.84	0.8	0.77	0.8	0.7991	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.469903	NA	NA	0.841279	0.799818	NA	0.797	NA	3.1922876
1333	6	90468465	90468465	C	A	intronic	MDN1	NA	NA	NA	intronic	ENSG00000112159	NA	NA	NA	NA	NA	6q15	NA	NA	NA	NA	rs6937244	0.87	0.87	0.866	0.828275	0.8082	0.9127	0.8429	0.8812	0.68	0.82	0.92	0.85	0.89	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.052473	NA	NA	NA	NA	NA	0.804	NA	3.1918
1333	14	90744672	90744672	G	A	UTR3	NRDE2	NM_017970:c.*8C>T	NA	NA	UTR3	ENSG00000119720	ENST00000354366:c.*8C>T,ENST00000357904:c.*8C>T,ENST00000556189:c.*1981C>T,ENST00000553409:c.*3028C>T	NA	NA	NA	NA	14q32.11	NA	NA	NA	NA	rs10184	0.34	0.34	0.326	0.319888	0.3887	0.504	0.2954	0.0809	0.3998	0.4	0.51	0.31	0.09	0.3645	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.150966	NA	NA	0.388721	0.139582	NA	0.304	NA	3.1914124
1333	13	39622075	39622075	T	C	UTR3	NHLRC3	NM_001017370:c.*12T>C,NM_001012754:c.*12T>C	NA	NA	UTR3	ENSG00000188811	ENST00000470258:c.*12T>C,ENST00000379600:c.*12T>C,ENST00000379599:c.*12T>C	NA	NA	NA	NA	13q13.3	NA	Name=CTCF	NA	NA	rs9532318	0.83	0.83	0.851	0.836462	0.7058	0.9365	0.67	0.9493	0.8333	0.72	0.95	0.69	0.95	0.7515	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.550584	NA	NA	0.684646	0.912807	NA	0.739	NA	3.1913874
1333	12	85492094	85492094	C	T	intronic	LRRIQ1	NA	NA	NA	intronic	ENSG00000133640	NA	NA	NA	NA	NA	12q21.31	NA	NA	NA	NA	rs34798402	0.21	0.21	0.175	0.206869	0.2604	0.2222	0.3127	0.0446	0.2802	0.26	0.22	0.31	0.05	0.2778	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.266421	NA	NA	0.270697	0.076325	NA	0.275	NA	3.191103
1333	3	9972493	9972493	G	A	intronic	IL17RC	NA	NA	NA	intronic	ENSG00000163702	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs279545	0.64	0.64	0.607	0.622204	0.8091	0.8462	0.6859	0.1823	0.7485	0.8	0.8	0.68	0.19	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.112094	NA	NA	NA	NA	NA	0.522	NA	3.1909
1333	12	31242314	31242314	T	C	intronic	DDX11	NA	NA	NA	intronic	ENSG00000013573	NA	NA	NA	NA	NA	12p11.21	NA	NA	NA	NA	rs2005897	0.48	0.48	0.413	NA	NA	NA	NA	NA	NA	0.41	0.58	0.46	0.5	0.3881	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.317286	NA	NA	0.421047	0.498638	NA	0.283	NA	3.190853
1333	9	21929666	21929666	G	A	intergenic	MTAP,C9orf53	dist=63697;dist=37472	NA	NA	ncRNA_exonic	ENSG00000264801	NA	NA	NA	NA	NA	9p21.3	NA	NA	NA	NA	rs2518713	0.74	0.74	0.776	0.760184	0.8101	0.5357	0.5764	0.9803	0.773	0.82	0.52	0.63	0.97	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.157344	NA	NA	NA	NA	NA	0.775	NA	3.1899
1333	22	45210666	45210666	G	A	intronic	ARHGAP8,PRR5-ARHGAP8	NA	NA	NA	intronic	ENSG00000241484,ENSG00000248405	NA	NA	NA	NA	NA	22q13.31	NA	NA	NA	NA	rs2071758	0.26	0.26	0.246	0.270168	0.2833	0.3234	0.304	0.0991	0.409	0.27	0.37	0.27	0.12	0.2769	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.193601	NA	NA	0.250116	0.107808	NA	0.232	NA	3.189684
1333	7	142499190	142499190	G	A	intergenic	PRSS3P2,EPHB6	dist=16791;dist=53602	NA	NA	intronic	ENSG00000211772	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs374762833	NA	NA	NA	0.489617	0.4771	0.4851	0.4942	0.4924	0.5	NA	NA	NA	NA	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.478169	NA	NA	NA	NA	NA	0.152	NA	3.1895667
1333	11	6655332	6655332	T	A	intronic	DCHS1	NA	NA	NA	ncRNA_intronic	ENSG00000255410	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs2659869	0.4	0.4	0.383	0.38738	0.3777	0.4355	0.3718	0.4032	0.3374	0.39	0.46	0.38	0.38	0.3888	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.135171	NA	NA	0.377328	0.404589	NA	0.493	NA	3.1895053
1333	19	11031464	11031464	C	G	intronic	CARM1	NA	NA	NA	intronic	ENSG00000142453	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs2288842	0.31	0.31	0.288	0.265176	0.2744	0.5089	0.2565	0.1293	0.1943	0.27	0.57	0.27	0.11	0.272	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.97942	NA	NA	0.264302	0.143668	NA	0.261	NA	3.189298
1333	19	54203199	54203199	G	A	upstream	MIR518F	NA	NA	NA	upstream	ENSG00000207706	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs2116850	0.26	0.26	0.254	0.265974	0.2356	0.0704	0.1859	0.556	0.1636	0.23	0.05	0.2	0.59	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.959488	NA	NA	0.241986	0.536127	NA	0.319	NA	3.1890806
1333	19	54733038	54733038	C	G	intergenic	LILRB3,LILRA6	dist=6079;dist=7431	NA	NA	ncRNA_exonic	ENSG00000235081	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs11084324	0.71	0.71	0.675	0.677915	0.8111	0.7341	0.719	0.4077	0.819	0.84	0.72	0.77	0.45	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.378631	NA	NA	NA	NA	NA	0.652	NA	3.1889
1333	6	139229743	139229743	C	T	intronic	REPS1	NA	NA	NA	intronic	ENSG00000135597	NA	NA	NA	NA	NA	6q24.1	NA	NA	NA	NA	rs1188868	0.8	0.8	0.798	0.811302	0.8111	0.6389	0.866	0.947	0.7669	0.81	0.64	0.85	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.550263	NA	NA	NA	NA	NA	0.906	NA	3.1889
1333	6	139265279	139265279	C	T	intronic	REPS1	NA	NA	NA	intronic	ENSG00000135597	NA	NA	NA	NA	NA	6q24.1	NA	NA	NA	NA	rs1188898	0.8	0.8	0.789	0.807907	0.8111	0.628	0.866	0.944	0.7648	0.81	0.63	0.85	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.150204	NA	NA	NA	NA	NA	0.906	NA	3.1889
1333	14	24791136	24791136	A	G	intronic	ADCY4	NA	NA	NA	intronic	ENSG00000129467	NA	NA	NA	NA	NA	14q12	NA	NA	NA	NA	rs4981504	0.84	0.84	0.867	0.852636	0.8111	0.996	0.6455	0.8578	0.8875	0.8	0.99	0.69	0.86	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.05297	NA	NA	NA	NA	NA	0.862	NA	3.1889
1333	4	79305177	79305177	T	G	intronic	FRAS1	NA	NA	NA	intronic	ENSG00000138759	NA	NA	NA	NA	NA	4q21.21	NA	NA	NA	NA	rs7677133	0.23	0.23	0.199	0.212859	0.2714	0.2173	0.3458	0.118	0.182	0.27	0.22	0.32	0.13	0.2659	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.601373	4.601373	NA	0.274107	0.150517	NA	0.268	NA	3.188593
1333	19	11348098	11348098	G	A	intronic	DOCK6	NA	NA	NA	intronic	ENSG00000130158	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs34301174	0.2	0.2	0.194	0.222843	0.2853	0.2272	0.2363	0.0234	0.4141	0.28	0.21	0.21	0.04	0.2584	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.504396	NA	NA	0.26784	0.058432	NA	0.13	NA	3.18846
1333	22	44324676	44324676	A	G	intronic	PNPLA3	NA	NA	NA	intronic	ENSG00000100344	NA	NA	NA	NA	NA	22q13.31	NA	NA	Name=7	NA	rs139051	0.52	0.52	0.531	0.516374	0.6113	0.374	0.4049	0.615	0.5112	0.6	0.37	0.45	0.63	0.5668	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.40799	NA	NA	0.633488	0.58965	NA	0.609	NA	3.188412
1333	14	106791119	106791119	A	G	intergenic	LINC00226,LINC00221	dist=46153;dist=147336	NA	NA	exonic	ENSG00000211953	NA	synonymous SNV	ENSG00000211953:ENST00000390613:exon2:c.T237C:p.Y79Y	NA	NA	14q32.33	NA	NA	NA	NA	rs3181492	NA	NA	0.408	0.51238	0.4095	0.5764	0.4236	0.5968	0.501	NA	NA	NA	NA	0.4685	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.053391	NA	NA	0.433595	0.605558	NA	0.065	NA	3.188405
1333	5	142393562	142393562	G	A	intronic	ARHGAP26	NA	NA	NA	intronic	ENSG00000145819	NA	NA	NA	NA	NA	5q31.3	NA	NA	NA	NA	rs3822397	0.64	0.64	0.644	0.611022	0.8121	0.2778	0.6758	0.73	0.5409	0.8	0.27	0.73	0.78	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.338526	NA	NA	NA	NA	NA	0.746	NA	3.1879
1333	21	47544454	47544454	C	T	intronic	COL6A2	NA	NA	NA	intronic	ENSG00000142173	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs369935000	NA	NA	NA	0.743011	0.8121	0.8621	0.8919	0.6551	0.5624	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.002614	NA	NA	NA	NA	NA	NA	NA	3.1879
1333	19	35835940	35835940	C	T	intronic	CD22	NA	NA	NA	intronic	ENSG00000012124	NA	NA	NA	NA	NA	19q13.12	NA	NA	NA	NA	rs45453699	0.32	0.32	0.295	0.332668	0.2644	0.2698	0.4193	0.4297	0.2751	0.26	0.27	0.38	0.41	0.2795	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.959593	NA	NA	0.268256	0.418974	NA	0.362	NA	3.187844
1333	11	5593467	5593467	A	G	intergenic	OR52H1,OR52B6	dist=26714;dist=8640	NA	NA	intronic	ENSG00000196565	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs3910245	0.71	0.71	0.742	0.740216	0.4791	0.9802	0.6715	0.8268	0.6933	0.48	0.97	0.63	0.82	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.947814	NA	NA	NA	NA	NA	0.659	NA	3.1875667
1333	4	160251449	160251449	A	G	intronic	RAPGEF2	NA	NA	NA	intronic	ENSG00000109756	NA	NA	NA	NA	NA	4q32.1	NA	NA	NA	NA	rs55734414	0.33	0.33	0.052	0.484625	0.5378	0.371	0.4986	0.5356	0.4683	0.43	0.06	0.42	0.42	0.1401	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.891179	NA	NA	0.135132	0.160714	NA	0.036	NA	3.186968
1333	3	184071019	184071019	T	C	intronic	CLCN2	NA	NA	NA	intronic	ENSG00000114859,ENSG00000145191	NA	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs11920716	0.17	0.17	0.157	0.188898	0.2873	0.0516	0.2003	0.1649	0.2536	0.26	0.02	0.27	0.14	0.2352	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.711653	2.711653	NA	0.290581	0.172719	NA	0.036	NA	3.186919
1333	2	175318396	175318396	G	A	intronic	GPR155	NA	NA	NA	intronic	ENSG00000163328	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	rs12614979	NA	NA	NA	0.649561	0.8131	0.4673	0.598	0.6611	0.6902	NA	NA	NA	NA	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.863887	NA	NA	NA	NA	NA	0.167	NA	3.1869
1333	10	7769604	7769604	A	G	intronic	ITIH2	NA	NA	NA	intronic	ENSG00000151655	NA	NA	NA	NA	NA	10p14	NA	NA	NA	NA	rs2277226	0.78	0.78	0.748	0.731629	0.8131	0.6984	0.8718	0.7337	0.5798	0.81	0.72	0.86	0.72	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.468876	NA	NA	NA	NA	NA	0.775	NA	3.1869
1333	11	3436492	3436492	A	G	intergenic	LOC650368,TRPC2	dist=6114;dist=211198	NA	NA	ncRNA_exonic	ENSG00000166492	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs6578351	0.87	0.87	0.883	0.904553	0.8131	0.9831	0.8804	0.9372	0.8906	0.79	0.97	0.83	0.91	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.447117	NA	NA	NA	NA	NA	0.29	NA	3.1869
1333	13	46104663	46104663	C	T	intronic	COG3	NA	NA	NA	intronic	ENSG00000136152	NA	NA	NA	NA	NA	13q14.13	NA	NA	NA	NA	rs2404217	0.85	0.85	0.837	0.846645	0.8131	0.881	0.8818	0.82	0.8569	0.82	0.9	0.87	0.81	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.147876	NA	NA	NA	NA	NA	0.819	NA	3.1869
1333	13	95714858	95714858	A	C	intronic	ABCC4	NA	NA	NA	intronic	ENSG00000125257	NA	NA	NA	NA	NA	13q32.1	NA	NA	NA	NA	rs1751033	0.79	0.79	0.736	0.813498	0.8131	0.7847	0.7622	0.7995	0.8988	0.81	0.75	0.79	0.8	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.530503	NA	NA	NA	NA	NA	0.833	NA	3.1869
1333	20	31622839	31622839	T	C	intronic	BPIFB6	NA	NA	NA	intronic	ENSG00000167104	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs6059033	0.53	0.53	0.526	NA	NA	NA	NA	NA	NA	0.39	0.71	0.45	0.6	0.437	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.354155	1.354155	NA	0.376395	0.559918	NA	0.522	NA	3.186605
1333	20	18506617	18506617	G	A	intronic	SEC23B	NA	NA	NA	intronic	ENSG00000101310	NA	NA	NA	NA	NA	20p11.23	NA	NA	NA	NA	rs1555353	0.2	0.2	0.192	0.253195	0.3907	0.1409	0.2968	0.1891	0.2832	0.28	0.12	0.28	0.12	0.3071	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.354079	NA	NA	0.115698	0.069451	NA	NA	NA	3.186502
1333	19	55605694	55605694	A	G	intronic	PPP1R12C	NA	NA	NA	intronic	ENSG00000125503	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs3803898	0.46	0.46	0.356	0.444688	0.4026	0.5546	0.4827	0.4395	0.3548	0.4	0.56	0.46	0.44	0.0003	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.365458	NA	NA	0.410698	0.433727	NA	0.094	NA	3.186402
1333	2	10566804	10566804	A	G	intronic	HPCAL1	NA	NA	NA	intronic	ENSG00000115756	NA	NA	NA	NA	NA	2p25.1	NA	NA	NA	NA	rs2270307	0.17	0.17	0.176	0.173123	0.2833	0.0446	0.1599	0.1702	0.2055	0.26	0.03	0.17	0.19	0.2365	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.727586	NA	NA	0.293837	0.186564	NA	0.261	NA	3.186363
1333	10	71703995	71703995	A	G	intronic	COL13A1	NA	NA	NA	intronic	ENSG00000197467	NA	NA	NA	NA	NA	10q22.1	NA	NA	NA	NA	rs3750780	0.38	0.38	0.373	0.397963	0.3897	0.3552	0.4049	0.3828	0.4663	0.39	0.36	0.4	0.37	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.442258	NA	NA	0.424261	0.381503	NA	0.507	NA	3.186039
1333	1	16528233	16528233	G	A	intronic	ARHGEF19	NA	NA	NA	intronic	ENSG00000142632	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs221037	0.26	0.26	0.236	0.302117	0.2634	0.1508	0.4207	0.2943	0.4243	0.27	0.13	0.37	0.29	0.2948	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.697398	NA	NA	0.255814	0.277576	NA	0.29	NA	3.185986
1333	2	159731466	159731466	A	G	intergenic	DAPL1,TANC1	dist=58970;dist=93680	NA	NA	ncRNA_exonic	ENSG00000188668	NA	NA	NA	NA	NA	2q24.1	NA	NA	NA	NA	rs10186922	0.49	0.49	0.467	0.453075	0.8141	0.1181	0.5101	0.2837	0.6155	0.81	0.12	0.61	0.32	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.316409	NA	NA	NA	NA	NA	0.514	NA	3.1859
1333	12	96104138	96104138	T	C	intronic	NTN4	NA	NA	NA	intronic	ENSG00000074527	NA	NA	NA	NA	NA	12q22	NA	NA	NA	NA	rs2254316	0.8	0.8	0.813	0.817692	0.8141	0.8423	0.6974	0.8298	0.865	0.81	0.82	0.71	0.81	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.546698	NA	NA	NA	NA	NA	0.812	NA	3.1859
1333	3	97783546	97783546	A	G	intergenic	GABRR3,OR5AC2	dist=29398;dist=22471	NA	NA	exonic	ENSG00000213439	NA	unknown	UNKNOWN	NA	NA	3q11.2	NA	NA	NA	NA	rs1873627	0.51	0.51	0.522	0.502596	0.4493	0.4931	0.5346	0.5598	0.4673	0.46	0.5	0.51	0.59	0.5317	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.023589	2.023589	NA	NA	NA	NA	0.536	NA	3.1856667
1333	4	88052219	88052219	T	C	intronic	AFF1	NA	NA	NA	intronic	ENSG00000172493	NA	NA	NA	NA	NA	4q22.1	NA	Name=ERalpha_a,GR	NA	NA	rs342467	0.59	0.59	0.552	0.567292	0.6083	0.6002	0.6715	0.5378	0.4571	0.58	0.59	0.68	0.52	0.5937	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.477604	NA	NA	0.612558	0.554017	NA	0.71	NA	3.185442
1333	14	24526478	24526478	A	G	intronic	LRRC16B	NA	NA	NA	intronic	ENSG00000186648	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs12879859	0.28	0.28	0.27	0.282548	0.2525	0.4196	0.2017	0.2073	0.3313	0.26	0.44	0.2	0.19	0.2836	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.48785	NA	NA	0.278488	0.214934	ID=COSN164643;OCCURENCE=1(NS)	0.341	NA	3.185412
1333	19	49632309	49632309	T	C	intronic	PPFIA3	NA	NA	NA	intronic	ENSG00000177380	NA	NA	NA	NA	NA	19q13.33	NA	NA	Name=3	NA	rs4802566	0.6	0.6	0.61	0.61861	0.5994	0.253	0.5893	0.9682	0.5634	0.6	0.25	0.66	0.96	0.6016	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.024094	NA	NA	0.613721	0.903541	NA	0.659	NA	3.185279
1333	5	6602668	6602668	G	C	intronic	NSUN2	NA	NA	NA	intronic	ENSG00000037474	NA	NA	NA	NA	NA	5p15.31	NA	NA	NA	NA	rs2303710	0.38	0.38	0.384	0.380391	0.4185	0.2083	0.4078	0.5371	0.2873	0.4	0.2	0.42	0.53	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.773645	NA	NA	0.396292	0.531069	NA	0.486	NA	3.185208
1333	11	117332343	117332343	C	T	intronic	DSCAML1	NA	NA	NA	intronic	ENSG00000177103	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs2298766	0.24	0.24	0.222	0.224441	0.2684	0.2679	0.2262	0.1104	0.2873	0.27	0.29	0.24	0.15	0.259	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.639385	2.639385	NA	0.287477	0.146524	NA	0.181	NA	3.185123
1333	3	182947413	182947413	C	G	intronic	MCF2L2	NA	NA	NA	intronic	ENSG00000053524	NA	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs1122143	0.23	0.23	0.228	0.240815	0.2724	0.244	0.2219	0.1256	0.3742	0.28	0.26	0.22	0.14	0.2657	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.424188	NA	NA	0.27686	0.140554	NA	0.196	NA	3.18504
1334	1	206626779	206626779	A	G	intronic	SRGAP2	NA	NA	NA	intronic	ENSG00000163486	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs2483059	0.66	0.66	0.687	0.672324	0.8151	0.3552	0.6297	0.7859	0.729	0.81	0.34	0.69	0.79	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.897721	NA	NA	NA	NA	NA	0.754	NA	3.1849
1334	7	103162370	103162370	C	T	intronic	RELN	NA	NA	NA	intronic	ENSG00000189056	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs10282605	0.76	0.76	0.745	0.747604	0.8151	0.751	0.8256	0.5809	0.8446	0.8	0.73	0.81	0.66	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.095138	NA	NA	NA	NA	NA	0.812	NA	3.1849
1334	7	128409225	128409225	A	G	UTR3	CALU	NM_001199671:c.*4A>G,NM_001219:c.*4A>G,NM_001199673:c.*77A>G,NM_001199672:c.*4A>G,NM_001130674:c.*4A>G	NA	NA	UTR3	ENSG00000128595	ENST00000538546:c.*4A>G,ENST00000535623:c.*726A>G,ENST00000542996:c.*4A>G,ENST00000535011:c.*77A>G,ENST00000249364:c.*4A>G,ENST00000449187:c.*4A>G,ENST00000479257:c.*4A>G,ENST00000493278:c.*4A>G	NA	NA	NA	NA	7q32.1	NA	NA	NA	NA	rs1043550	0.23	0.23	0.212	0.190895	0.4175	0.0675	0.2378	0.1135	0.1564	0.41	0.06	0.27	0.13	0.3214	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.751833	NA	NA	0.409651	0.149115	ID=COSN168196;OCCURENCE=1(large_intestine)	0.246	NA	3.1847824
1334	11	1213004	1213004	T	C	intergenic	MUC2,MUC5B	dist=108587;dist=31291	NA	NA	intergenic	ENSG00000215182,ENSG00000117983	dist=50643;dist=31292	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs112704799	NA	NA	0.329	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.1488	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.533854	NA	NA	NA	NA	NA	NA	NA	3.1845334
1334	2	86315741	86315741	C	T	exonic	POLR1A	NA	synonymous SNV	POLR1A:NM_015425:exon6:c.G678A:p.T226T	exonic	ENSG00000068654	NA	synonymous SNV	ENSG00000068654:ENST00000263857:exon6:c.G678A:p.T226T,ENSG00000068654:ENST00000409681:exon6:c.G678A:p.T226T	NA	NA	2p11.2	NA	NA	NA	NA	rs2288120	0.67	0.67	0.643	0.657947	0.84	0.6567	0.8228	0.3139	0.82	0.84	0.67	0.84	0.28	0.7948	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.255894	1.255894	NA	0.847561	0.421415	NA	0.674	NA	3.1843056
1334	18	14475682	14475682	C	T	intergenic	CYP4F35P,CXADRP3	dist=133159;dist=2272	NA	NA	intergenic	ENSG00000266605,ENSG00000265766	dist=24800;dist=2272	NA	NA	NA	NA	18p11.21	NA	NA	NA	NA	rs62080658	0.22	0.22	0.195	0.223642	0.1491	0.4742	0.2464	0.0734	0.229	0.13	0.46	0.24	0.07	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.933307	NA	NA	NA	NA	NA	0.217	NA	3.1842334
1334	2	25610287	25610287	G	T	intronic	DTNB	NA	NA	NA	intronic	ENSG00000138101	NA	NA	NA	NA	NA	2p23.3	NA	NA	NA	NA	rs66917623	0.16	0.16	0.137	0.160942	0.2922	0.0327	0.1945	0.0598	0.271	0.27	0.04	0.22	0.08	0.2428	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.560896	NA	NA	0.280841	0.099816	NA	0.246	NA	3.184159
1334	3	141923506	141923506	C	T	intronic	GK5	NA	NA	NA	exonic	ENSG00000175066	NA	nonsynonymous SNV	ENSG00000175066:ENST00000487672:exon4:c.G442A:p.V148I	NA	NA	3q23	NA	NA	NA	NA	rs9830411	0.64	0.64	0.649	0.592452	0.659	0.5308	0.6499	0.6641	0.4499	0.67	0.55	0.68	0.69	0.6362	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.643407	NA	NA	0.687704	0.670981	NA	0.594	NA	3.1837627
1334	3	46717065	46717065	C	G	intronic	ALS2CL	NA	NA	NA	UTR3	ENSG00000178038	ENST00000450172:c.*3262G>C,ENST00000431015:c.*3105G>C,ENST00000423707:c.*1736G>C	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs7635360	0.3	0.3	0.264	0.308307	0.332	0.3671	0.3228	0.1415	0.4387	0.34	0.36	0.31	0.16	0.3327	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.238209	NA	NA	0.318256	0.188833	NA	0.261	NA	3.1837107
1334	5	98192465	98192465	T	C	intronic	CHD1	NA	NA	NA	intronic	ENSG00000153922	NA	NA	NA	NA	NA	5q15	NA	NA	NA	NA	rs692832	0.29	0.29	0.3	0.283147	0.2773	0.0427	0.2334	0.6029	0.1401	0.27	0.05	0.27	0.61	0.266	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.315827	NA	NA	0.273248	0.525712	NA	0.341	NA	3.183452
1334	18	77135472	77135472	A	G	intronic	ATP9B	NA	NA	NA	intronic	ENSG00000166377	NA	NA	NA	NA	NA	18q23	NA	NA	NA	NA	rs2280058	0.29	0.29	0.291	0.28115	0.2634	0.4921	0.2032	0.0681	0.4254	0.27	0.53	0.23	0.08	0.2842	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.77943	NA	NA	0.269132	0.09941	NA	0.232	NA	3.183268
1334	17	8051639	8051639	A	G	intronic	PER1	NA	NA	NA	intronic	ENSG00000179094	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs10462024	0.28	0.28	0.255	0.29992	0.4036	0.1677	0.2406	0.1762	0.5389	0.41	0.19	0.27	0.2	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.531056	2.531056	NA	0.413262	0.229769	NA	0.159	NA	3.183138
1334	3	53205494	53205494	G	A	intronic	PRKCD	NA	NA	NA	intronic	ENSG00000163932	NA	NA	NA	NA	NA	3p21.1	NA	NA	NA	NA	rs3773727	0.79	0.79	0.792	0.769569	0.8171	0.752	0.7666	0.7943	0.7076	0.81	0.8	0.77	0.77	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.035897	NA	NA	NA	NA	NA	0.848	NA	3.1829
1334	7	813618	813618	T	C	intronic	HEATR2	NA	NA	NA	intronic	ENSG00000164818	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs4719279	0.74	0.74	0.721	0.746605	0.8171	0.62	0.7767	0.6936	0.8548	0.8	0.63	0.74	0.75	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.820249	NA	NA	NA	NA	NA	0.667	NA	3.1829
1334	10	105799599	105799599	C	A	intronic	COL17A1	NA	NA	NA	intronic	ENSG00000065618	NA	NA	NA	NA	NA	10q24.33	NA	NA	NA	NA	rs11191905	0.72	0.72	0.689	0.685903	0.8171	0.8234	0.7695	0.4183	0.7117	0.81	0.85	0.78	0.4	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.511245	NA	NA	NA	NA	NA	0.732	NA	3.1829
1334	15	42134301	42134301	A	C	intronic	JMJD7-PLA2G4B,PLA2G4B	NA	NA	NA	intronic	ENSG00000168970,ENSG00000243708	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs1648835	0.77	0.77	0.746	0.755591	0.8171	0.881	0.8228	0.5749	0.7597	0.82	0.87	0.81	0.53	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.182284	NA	NA	NA	NA	NA	0.659	NA	3.1829
1334	15	42137576	42137576	C	T	intronic	JMJD7-PLA2G4B,PLA2G4B	NA	NA	NA	intronic	ENSG00000168970,ENSG00000243708	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs1648828	0.76	0.76	0.724	0.752796	0.8171	0.877	0.8228	0.5673	0.7597	0.82	0.87	0.81	0.52	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.290196	NA	NA	NA	NA	NA	0.659	NA	3.1829
1334	15	42137581	42137581	A	C	intronic	JMJD7-PLA2G4B,PLA2G4B	NA	NA	NA	intronic	ENSG00000168970,ENSG00000243708	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs1648827	0.76	0.76	0.718	0.753395	0.8171	0.88	0.8228	0.5673	0.7597	0.82	0.87	0.81	0.52	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.373445	NA	NA	NA	NA	NA	0.667	NA	3.1829
1334	10	97816420	97816420	G	A	ncRNA_intronic	ENTPD1-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000226688	NA	NA	NA	NA	NA	10q24.1	NA	NA	NA	NA	rs7099399	0.57	0.57	0.58	0.585663	0.4602	0.8016	0.5663	0.5	0.6217	0.45	0.79	0.51	0.56	0.532	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.421756	1.421756	NA	0.492202	0.509132	NA	0.42	NA	3.1822646
1334	1	11740358	11740358	A	G	intronic	MAD2L2	NA	NA	NA	intronic	ENSG00000116670	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs7417320	0.43	0.43	0.43	0.436502	0.4026	0.4256	0.513	0.4039	0.4724	0.42	0.39	0.47	0.46	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.292173	NA	NA	0.415369	0.420091	NA	0.471	NA	3.182031
1334	5	1214264	1214264	A	G	intronic	SLC6A19	NA	NA	NA	intronic	ENSG00000174358	NA	NA	NA	NA	NA	5p15.33	NA	NA	NA	NA	rs6554663	0.74	0.74	0.742	0.74381	0.8181	0.5595	0.7507	0.8109	0.7618	0.81	0.55	0.8	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.426158	NA	NA	NA	NA	NA	0.696	NA	3.1819
1334	12	52711624	52711624	C	T	intronic	KRT83	NA	NA	NA	intronic	ENSG00000170523	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs2857666	0.36	0.36	0.357	0.376597	0.4105	0.1885	0.3213	0.5008	0.407	0.4	0.19	0.34	0.51	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.229207	NA	NA	0.40792	0.497832	NA	0.428	NA	3.18158
1334	4	37592674	37592674	T	C	UTR3	C4orf19,RELL1	NM_001104629:c.*52T>C,NM_018302:c.*52T>C;NM_001085399:c.*169A>G	NA	NA	UTR3	ENSG00000154274,ENSG00000181826	ENST00000381980:c.*52T>C,ENST00000284437:c.*52T>C;ENST00000314117:c.*169A>G	NA	NA	NA	NA	4p14	NA	NA	Name=3	NA	rs937941	0.54	0.54	0.547	0.494808	0.7584	0.4315	0.4755	0.3457	0.5041	0.75	0.45	0.5	0.34	0.6485	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.73369	NA	NA	0.744911	0.433685	NA	0.587	NA	3.1815224
1334	4	6374468	6374468	T	C	intronic	PPP2R2C	NA	NA	NA	intronic	ENSG00000074211	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs12511721	0.32	0.32	0.269	0.347444	0.2296	0.3611	0.389	0.3918	0.365	0.22	0.4	0.37	0.35	0.321	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.668649	NA	NA	0.268023	0.375624	NA	0.377	NA	3.181377
1334	11	49007698	49007698	A	T	intergenic	OR4A47,TRIM49B	dist=496424;dist=45454	NA	NA	ncRNA_exonic	ENSG00000254764	NA	NA	NA	NA	NA	11p11.12	NA	NA	NA	NA	rs1910835	0.75	0.75	0.753	0.708267	0.8191	0.5972	0.7622	0.8101	0.5327	0.79	0.63	0.78	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.606412	NA	NA	NA	NA	NA	0.761	NA	3.1809
1334	8	2053942	2053942	T	C	intronic	MYOM2	NA	NA	NA	intronic	ENSG00000036448	NA	NA	NA	NA	NA	8p23.3	NA	NA	NA	NA	rs12680413	0.77	0.77	0.767	0.781949	0.8191	0.7212	0.7911	0.7595	0.8303	0.82	0.72	0.75	0.77	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.659687	NA	NA	NA	NA	NA	0.79	NA	3.1809
1334	11	6243982	6243982	T	G	intronic	FAM160A2	NA	NA	NA	intronic	ENSG00000051009	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs325606	0.8	0.8	0.779	0.781749	0.8191	0.9593	0.8343	0.5401	0.8497	0.81	0.96	0.86	0.58	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.738024	NA	NA	NA	NA	NA	0.833	NA	3.1809
1334	15	42528676	42528676	C	T	intronic	TMEM87A	NA	NA	NA	intronic	ENSG00000103978	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs1679012	0.61	0.61	0.594	0.530751	0.8191	0.8185	0.4726	0.0416	0.6401	0.84	0.84	0.53	0.06	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.400436	NA	NA	NA	NA	NA	0.58	NA	3.1809
1334	6	119611989	119611989	A	T	intronic	MAN1A1	NA	NA	NA	intronic	ENSG00000111885	NA	NA	NA	NA	NA	6q22.31	NA	NA	NA	NA	rs9489671	0.32	0.32	0.318	0.292532	0.4225	0.123	0.2795	0.3986	0.1994	0.43	0.12	0.32	0.41	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.254277	1.254277	NA	0.396901	0.393786	NA	0.348	NA	3.180599
1334	12	11461470	11461470	A	G	exonic	PRB4	NA	synonymous SNV	PRB4:NM_002723:exon3:c.T447C:p.G149G	exonic	ENSG00000230657	NA	synonymous SNV	ENSG00000230657:ENST00000279575:exon3:c.T447C:p.G149G,ENSG00000230657:ENST00000535904:exon3:c.T447C:p.G149G	NA	NA	12p13.2	NA	NA	NA	NA	rs1052807	0.74	0.74	0.737	0.755391	0.8499	0.8095	0.8429	0.6218	0.7209	0.82	0.77	0.81	0.55	0.8079	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.616436	NA	NA	0.828289	0.684294	NA	0.674	NA	3.1805776
1334	2	113887273	113887273	G	A	intronic	IL1RN	NA	NA	NA	intronic	ENSG00000136689	NA	NA	NA	NA	NA	2q13	NA	NA	NA	NA	rs446433	0.18	0.18	0.151	0.191693	0.2922	0.0942	0.3314	0.0333	0.3037	0.29	0.08	0.33	0.04	0.2492	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.656589	NA	NA	0.278372	0.064231	NA	0.246	NA	3.180228
1334	8	124664873	124664873	A	G	exonic	KLHL38	NA	synonymous SNV	KLHL38:NM_001081675:exon1:c.T294C:p.H98H	exonic	ENSG00000175946	NA	synonymous SNV	ENSG00000175946:ENST00000325995:exon1:c.T294C:p.H98H	NA	NA	8q24.13	NA	NA	NA	NA	rs7387792	0.63	0.63	0.742	0.727636	0.8579	0.7113	0.7118	0.6694	0.7004	0.72	0.61	0.67	0.5	0.7903	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.870856	NA	NA	0.83846	0.713972	NA	NA	NA	3.1800066
1334	3	186015743	186015743	C	T	intronic	DGKG	NA	NA	NA	intronic	ENSG00000058866	NA	NA	NA	NA	NA	3q27.3	NA	NA	NA	NA	rs888385	0.66	0.66	0.105	0.695088	0.8201	0.5327	0.7507	0.7027	0.684	0.76	0.49	0.75	0.66	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.179532	NA	NA	NA	NA	NA	NA	NA	3.1799
1334	3	186015744	186015744	G	C	intronic	DGKG	NA	NA	NA	intronic	ENSG00000058866	NA	NA	NA	NA	NA	3q27.3	NA	NA	NA	NA	rs66460112	0.66	0.66	0.123	0.704473	0.8201	0.5327	0.7507	0.7073	0.726	0.76	0.49	0.75	0.66	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.652041	NA	NA	NA	NA	NA	NA	NA	3.1799
1334	9	137321156	137321156	A	G	intronic	RXRA	NA	NA	NA	intronic	ENSG00000186350	NA	NA	NA	NA	NA	9q34.2	NA	NA	NA	NA	rs1536475	0.82	0.82	0.844	0.816693	0.8201	0.7589	0.7911	0.9803	0.6697	0.82	0.75	0.76	0.96	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.590379	NA	NA	NA	NA	NA	0.877	NA	3.1799
1334	15	43075531	43075531	C	T	intronic	TTBK2	NA	NA	NA	intronic	ENSG00000128881	NA	NA	NA	NA	NA	15q15.2	NA	NA	NA	NA	rs9920092	0.77	0.77	0.782	0.801318	0.8201	0.8353	0.6715	0.7663	0.8865	0.82	0.8	0.7	0.72	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.636383	NA	NA	NA	NA	NA	0.688	NA	3.1799
1334	2	113887262	113887262	C	T	intronic	IL1RN	NA	NA	NA	intronic	ENSG00000136689	NA	NA	NA	NA	NA	2q13	NA	NA	NA	NA	rs423904	0.18	0.18	0.155	0.191693	0.2922	0.0942	0.3314	0.0333	0.3037	0.29	0.08	0.33	0.04	0.2492	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.058759	NA	NA	0.278721	0.064231	NA	0.246	NA	3.179879
1334	4	74453691	74453691	T	C	intronic	RASSF6	NA	NA	NA	intronic	ENSG00000169435	NA	NA	NA	NA	NA	4q13.3	NA	NA	NA	NA	rs10011419	0.25	0.25	0.214	0.262181	0.2833	0.1141	0.4712	0.2716	0.2321	0.28	0.11	0.41	0.25	0.2622	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.104137	NA	NA	0.274843	0.291326	NA	0.275	NA	3.179657
1334	17	76495050	76495050	C	T	ncRNA_exonic	LOC100996295	NA	NA	NA	ncRNA_exonic	ENSG00000267432	NA	NA	NA	NA	NA	17q25.3	NA	NA	Name=10	NA	rs691291	0.9	0.9	0.895	0.915535	0.8131	0.9702	0.8934	0.9395	0.9479	0.83	0.97	0.86	0.93	0.863	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.187988	NA	NA	0.810993	0.924533	NA	0.935	NA	3.1795736
1334	11	44401323	44401323	G	T	intergenic	ALX4,CD82	dist=69607;dist=185818	NA	NA	intergenic	ENSG00000052850,ENSG00000255451	dist=69607;dist=88691	NA	NA	NA	NA	11p11.2	NA	NA	NA	NA	rs55635812	0.07	0.07	0.042	0.0601038	0.1541	0.004	0.1081	0.0121	0.0521	0.14	0.0017	0.11	0.01	NA	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.919901	NA	NA	NA	NA	NA	NA	NA	3.1792334
1334	6	129796620	129796620	C	T	intronic	LAMA2	NA	NA	NA	intronic	ENSG00000196569	NA	NA	NA	NA	NA	6q22.33	NA	NA	NA	NA	rs7741996	0.4	0.4	0.4	0.408347	0.4105	0.2956	0.3804	0.4887	0.4335	0.42	0.28	0.37	0.51	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.635596	NA	NA	0.410434	0.453035	NA	0.391	NA	3.179066
1334	19	48525379	48525379	T	C	intronic	ELSPBP1	NA	NA	NA	intronic	ENSG00000169393	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs11671666	0.18	0.18	0.184	0.173323	0.2913	0.0278	0.1599	0.1853	0.1953	0.28	0.03	0.17	0.2	0.2383	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.060667	NA	NA	0.291395	0.223105	NA	0.362	NA	3.179005
1334	1	55524116	55524116	C	T	intronic	PCSK9	NA	NA	NA	intronic	ENSG00000169174	NA	NA	NA	NA	NA	1p32.3	NA	NA	NA	NA	rs585131	0.86	0.86	0.852	0.869209	0.8211	0.9881	0.8948	0.7746	0.9059	0.82	0.98	0.88	0.79	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.055501	NA	NA	NA	NA	NA	0.884	NA	3.1789
1334	11	48534327	48534327	T	C	intergenic	OR4A47,TRIM49B	dist=23053;dist=518825	NA	NA	ncRNA_exonic	ENSG00000254832	NA	NA	NA	NA	NA	11p11.2	NA	NA	NA	NA	rs10732504	0.74	0.74	0.698	0.695088	0.8211	0.6062	0.7594	0.7421	0.5481	0.82	0.65	0.79	0.71	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.253111	NA	NA	NA	NA	NA	0.754	NA	3.1789
1334	1	156287360	156287360	C	T	intronic	CCT3	NA	NA	NA	intronic	ENSG00000163468	NA	NA	NA	NA	NA	1q22	NA	NA	NA	NA	rs2249790	0.25	0.25	0.25	0.235224	0.2992	0.2619	0.1758	0.1936	0.2403	0.3	0.28	0.2	0.18	0.2557	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.085923	NA	NA	0.266744	0.224694	NA	0.167	NA	3.178356
1334	17	61958669	61958669	G	T	intronic	GH2	NA	NA	NA	intronic	ENSG00000136487	NA	NA	NA	NA	NA	17q23.3	NA	NA	NA	NA	rs2006123	0.32	0.32	0.361	0.337061	0.2674	0.0486	0.2291	0.8033	0.1524	0.26	0.05	0.23	0.79	0.2764	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.054465	NA	NA	0.278204	0.699318	ID=COSN165501;OCCURENCE=1(NS)	0.319	NA	3.177996
1334	20	42264726	42264726	T	C	intronic	IFT52	NA	NA	NA	intronic	ENSG00000101052	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs2273523	0.77	0.77	0.749	0.763778	0.8221	0.7937	0.8012	0.6641	0.7812	0.82	0.77	0.81	0.66	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.854204	NA	NA	NA	NA	NA	0.761	NA	3.1779
1334	9	35707054	35707054	C	T	intronic	TLN1	NA	NA	NA	intronic	ENSG00000137076	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs741917	0.2	0.2	0.18	0.221645	0.2744	0.0496	0.3458	0.2012	0.2843	0.27	0.05	0.33	0.16	0.2637	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.837323	NA	NA	0.284302	0.198593	NA	0.261	NA	3.177598
1334	6	29786028	29786028	A	G	intergenic	LOC554223,HLA-G	dist=20444;dist=8728	NA	NA	intergenic	ENSG00000237042,ENSG00000204632	dist=5555;dist=8716	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs7742733	0.26	0.26	0.25	0.292931	0.1561	0.4891	0.2089	0.2413	0.3609	0.15	0.49	0.23	0.19	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.010225	NA	NA	NA	NA	NA	0.312	NA	3.1772334
1334	8	82751822	82751822	T	G	intronic	SNX16	NA	NA	NA	intronic	ENSG00000104497	NA	NA	NA	NA	NA	8q21.13	NA	NA	NA	NA	rs1814534	0.27	0.27	0.259	0.28155	0.2664	0.377	0.3184	0.1029	0.4141	0.28	0.37	0.31	0.13	0.2994	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.080347	NA	NA	0.257093	0.142533	NA	0.217	NA	3.177107
1334	1	22172458	22172458	T	C	intronic	HSPG2	NA	NA	NA	intronic	ENSG00000142798	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs7355045	0.76	0.76	0.78	0.758586	0.8231	0.8085	0.6758	0.6528	0.8425	0.81	0.81	0.68	0.68	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.129036	NA	NA	NA	NA	NA	0.681	NA	3.1769
1334	2	29226872	29226872	A	G	intronic	FAM179A	NA	NA	NA	intronic	ENSG00000189350	NA	NA	NA	NA	NA	2p23.2	NA	NA	NA	NA	rs13028837	0.68	0.68	0.669	0.652356	0.8231	0.6687	0.7709	0.4319	0.6738	0.8	0.65	0.79	0.46	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.714103	NA	NA	NA	NA	NA	0.732	NA	3.1769
1334	11	2357108	2357108	C	G	intergenic	TSPAN32,CD81	dist=17678;dist=41439	NA	NA	ncRNA_intronic	ENSG00000238184	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs2173888	0.69	0.69	0.683	0.697684	0.8231	0.4554	0.7695	0.6641	0.8129	0.83	0.44	0.79	0.68	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.973587	NA	NA	NA	NA	NA	0.783	NA	3.1769
1334	14	51712092	51712092	T	C	intronic	TMX1	NA	NA	NA	UTR3	ENSG00000139921	ENST00000556683:c.*12T>C	NA	NA	NA	NA	14q22.1	NA	NA	NA	NA	rs4606635	0.26	0.26	0.243	0.244209	0.3211	0.0437	0.3963	0.2905	0.2014	0.35	0.03	0.35	0.31	0.3302	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.021912	4.021912	NA	0.338796	0.257872	NA	0.232	NA	3.1765707
1334	17	61766880	61766880	C	A	intronic	MAP3K3	NA	NA	NA	intronic	ENSG00000198909	NA	NA	NA	NA	NA	17q23.3	NA	NA	NA	NA	rs1877316	0.24	0.24	0.25	0.230631	0.2654	0.0496	0.2003	0.4198	0.1472	0.26	0.05	0.2	0.44	0.2807	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.76886	1.76886	NA	0.277442	0.350885	NA	0.232	NA	3.176458
1334	2	201505953	201505953	C	T	intronic	AOX1	NA	NA	NA	intronic	ENSG00000138356	NA	NA	NA	NA	NA	2q33.1	NA	NA	NA	NA	rs11887334	0.33	0.33	0.348	0.334665	0.2753	0.503	0.2695	0.3064	0.3067	0.27	0.49	0.23	0.31	0.2915	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.929998	NA	NA	0.256744	0.305631	NA	0.384	NA	3.176456
1334	15	22928537	22928537	G	C	intronic	CYFIP1	NA	NA	NA	intronic	ENSG00000068793	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs79791617	0.24	0.24	0.208	0.199481	0.2783	0.2153	0.3501	0.0885	0.1452	0.29	0.24	0.34	0.11	0.2724	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.651574	NA	NA	0.272918	0.103949	NA	0.109	NA	3.176382
1334	2	154428	154428	C	T	intergenic	FAM110C,SH3YL1	dist=107840;dist=63708	NA	NA	intergenic	ENSG00000184731,ENSG00000227061	dist=108043;dist=43141	NA	NA	NA	NA	2p25.3	NA	NA	NA	NA	rs450255	0.17	0.17	0.163	0.165935	0.1571	0.1359	0.1585	0.2542	0.092	0.15	0.14	0.15	0.25	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.30439	NA	NA	NA	NA	NA	0.268	NA	3.1762334
1334	1	200090120	200090120	G	A	intronic	NR5A2	NA	NA	NA	intronic	ENSG00000116833	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs3762398	0.24	0.24	0.217	0.257788	0.2664	0.2321	0.3919	0.1899	0.272	0.25	0.2	0.36	0.18	0.2763	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.205444	NA	NA	0.281163	0.192465	NA	0.319	NA	3.176137
1334	11	118134785	118134785	T	G	intronic	MPZL2	NA	NA	NA	intronic	ENSG00000149573	NA	NA	NA	NA	NA	11q23.3	NA	Name=Ini1	NA	NA	rs1624780	0.59	0.59	0.597	0.619209	0.6113	0.496	0.5648	0.6891	0.6984	0.61	0.53	0.56	0.66	0.6016	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.862336	NA	NA	0.61115	0.653182	ID=COSN164062;OCCURENCE=1(breast)	0.688	NA	3.17595
1334	9	137320855	137320855	G	T	intronic	RXRA	NA	NA	NA	intronic	ENSG00000186350	NA	NA	NA	NA	NA	9q34.2	NA	NA	NA	NA	rs3118570	0.84	0.84	0.849	0.830072	0.8241	0.8036	0.8012	0.9826	0.6779	0.83	0.79	0.78	0.97	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.428022	NA	NA	NA	NA	NA	0.884	NA	3.1759
1334	12	9086683	9086683	A	T	intronic	PHC1	NA	NA	NA	intronic	ENSG00000111752	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs1805735	0.72	0.72	0.705	0.720248	0.8241	0.4563	0.8573	0.7398	0.7618	0.83	0.5	0.86	0.69	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.602179	NA	NA	NA	NA	NA	0.826	NA	3.1759
1334	12	9097933	9097933	C	A	intronic	M6PR	NA	NA	NA	intronic	ENSG00000003056	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs1805725	0.73	0.73	0.721	0.739816	0.8241	0.4464	0.8602	0.8192	0.7628	0.83	0.48	0.86	0.77	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.328149	NA	NA	NA	NA	NA	0.848	NA	3.1759
1334	1	167088473	167088473	C	A	intronic	DUSP27	NA	NA	NA	intronic	ENSG00000198842	NA	NA	NA	NA	NA	1q24.1	NA	NA	NA	NA	rs1410244	0.42	0.42	0.393	0.404952	0.2445	0.7351	0.2536	0.3903	0.3569	0.25	0.75	0.27	0.41	0.3257	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.301132	NA	NA	0.254186	0.358829	NA	0.355	NA	3.175614
1334	3	53882661	53882661	A	G	intronic	IL17RB	NA	NA	NA	intronic	ENSG00000056736	NA	NA	NA	NA	NA	3p21.1	NA	NA	NA	NA	rs2232333	0.15	0.15	0.133	0.115615	0.2942	0.001	0.1974	0.034	0.1022	0.31	0.0017	0.23	0.04	0.2245	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.333623	NA	NA	0.30593	0.085111	NA	0.232	NA	3.17537
1334	19	10477067	10477067	A	G	intronic	TYK2	NA	NA	NA	intronic	ENSG00000105397	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs34725611	0.29	0.29	0.254	0.269369	0.2634	0.5288	0.1945	0.0893	0.3047	0.28	0.48	0.23	0.12	0.2804	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.143827	NA	NA	0.281163	0.116659	ID=COSN165721;OCCURENCE=1(breast)	0.123	NA	3.175037
1335	11	21592228	21592228	C	A	intronic	NELL1	NA	NA	NA	intronic	ENSG00000165973	NA	NA	NA	NA	NA	11p15.1	NA	NA	NA	NA	rs4922847	0.65	0.65	0.622	0.576078	0.825	0.6538	0.6744	0.2829	0.5665	0.82	0.69	0.68	0.3	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.251929	NA	NA	NA	NA	NA	0.645	NA	3.175
1335	15	28211758	28211758	A	G	intronic	OCA2	NA	NA	NA	intronic	ENSG00000104044	NA	NA	NA	NA	NA	15q13.1	NA	NA	NA	NA	rs4778218	0.9	0.9	0.924	0.864617	0.825	0.998	0.7738	0.9909	0.6616	0.82	1	0.77	0.99	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.046838	NA	NA	NA	NA	NA	0.942	NA	3.175
1335	16	75276295	75276295	A	G	intronic	BCAR1	NA	NA	NA	intronic	ENSG00000050820	NA	NA	NA	NA	NA	16q23.1	NA	NA	NA	NA	rs7195938	0.91	0.91	0.904	0.933706	0.825	0.9802	0.9121	0.9909	0.9356	0.82	0.98	0.91	0.99	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.424704	NA	NA	NA	NA	NA	0.87	NA	3.175
1335	22	17394989	17394989	T	C	intergenic	HSFY1P1,GAB4	dist=84764;dist=47838	NA	NA	downstream	ENSG00000253691	NA	NA	NA	NA	NA	22q11.1	NA	NA	NA	NA	rs1860945	0.26	0.26	0.232	0.256789	0.325	0.0466	0.2925	0.354	0.2464	0.34	0.04	0.3	0.36	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.876224	NA	NA	NA	NA	NA	0.268	NA	3.175
1335	6	36936771	36936771	A	G	intronic	MTCH1	NA	NA	NA	intronic	ENSG00000137409	NA	NA	NA	NA	NA	6p21.2	NA	NA	NA	NA	rs7772210	0.23	0.23	0.193	0.234425	0.2753	0.0933	0.3156	0.2474	0.2628	0.28	0.09	0.32	0.26	0.2622	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.173469	NA	NA	0.287674	0.236269	NA	0.246	NA	3.174826
1335	6	70490511	70490511	A	G	intronic	LMBRD1	NA	NA	NA	intronic	ENSG00000168216	NA	NA	NA	NA	NA	6q13	NA	NA	NA	NA	rs9346353	0.39	0.39	0.356	0.386981	0.4314	0.5655	0.438	0.1271	0.4724	0.43	0.56	0.4	0.14	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.091413	NA	NA	0.394092	0.169798	NA	0.304	NA	3.174508
1335	3	45804391	45804391	C	T	intronic	SLC6A20	NA	NA	NA	intronic	ENSG00000163817	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs2191027	0.15	0.15	0.139	0.1248	0.2992	0.0169	0.1931	0.0204	0.1493	0.29	0.02	0.2	0.04	0.2334	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.164313	NA	NA	0.292907	0.060145	NA	0.109	NA	3.174493
1335	11	20639457	20639457	A	G	intronic	SLC6A5	NA	NA	NA	intronic	ENSG00000165970	NA	NA	NA	NA	NA	11p15.1	NA	NA	NA	NA	rs11025653	0.15	0.15	0.123	0.126597	0.2694	0.0179	0.1729	0.0227	0.1994	0.29	0.01	0.22	0.04	0.2527	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.226264	NA	NA	0.303605	0.068151	NA	0.087	NA	3.174295
1335	18	77132793	77132793	G	A	intronic	ATP9B	NA	NA	NA	intronic	ENSG00000166377	NA	NA	NA	NA	NA	18q23	NA	NA	NA	NA	rs3817178	0.29	0.29	0.27	0.283746	0.2664	0.4911	0.2032	0.0673	0.4376	0.28	0.53	0.23	0.08	0.2873	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.28606	NA	NA	0.272093	0.100318	NA	0.232	NA	3.174207
1335	17	61710010	61710010	G	A	intronic	MAP3K3	NA	NA	NA	intronic	ENSG00000198909	NA	NA	NA	NA	NA	17q23.3	NA	NA	NA	NA	rs6504171	0.32	0.32	0.361	0.337859	0.2704	0.0496	0.2378	0.8003	0.1503	0.27	0.05	0.24	0.79	0.2769	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.030737	NA	NA	0.278605	0.704494	ID=COSN165494;OCCURENCE=1(breast)	0.319	NA	3.174095
1335	22	31843567	31843567	G	C	intronic	EIF4ENIF1	NA	NA	NA	intronic	ENSG00000184708,ENSG00000185721	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs2273251	0.29	0.29	0.25	0.238019	0.2773	0.499	0.2954	0.0151	0.1892	0.29	0.51	0.29	0.02	0.2723	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.507821	1.507821	NA	0.276395	0.057422	NA	0.232	NA	3.174005
1335	7	75761541	75761541	T	C	intergenic	MDH2,SRRM3	dist=65611;dist=69675	NA	NA	upstream	ENSG00000224273	NA	NA	NA	NA	NA	7q11.23	NA	NA	NA	NA	rs11763339	0.52	0.52	0.513	0.542732	0.326	0.6071	0.4121	0.789	0.4591	0.33	0.62	0.4	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.200633	NA	NA	NA	NA	NA	0.63	NA	3.174
1335	5	98210868	98210868	T	A	intronic	CHD1	NA	NA	NA	intronic	ENSG00000153922	NA	NA	NA	NA	NA	5q21.1	NA	NA	NA	NA	rs162140	0.3	0.3	0.318	0.296326	0.2903	0.0427	0.2363	0.6089	0.184	0.28	0.05	0.27	0.62	0.2519	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.136202	NA	NA	0.283926	0.534215	NA	0.348	NA	3.173874
1335	14	22337181	22337181	C	T	intergenic	OR4E2,DAD1	dist=202943;dist=696626	NA	NA	intronic	ENSG00000211788	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs909076	0.37	0.37	0.371	0.336661	0.493	0.1994	0.3012	0.3646	0.3047	0.49	0.23	0.35	0.35	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.444406	NA	NA	NA	NA	NA	0.529	NA	3.1736667
1335	15	22933691	22933691	G	A	intronic	CYFIP1	NA	NA	NA	intronic	ENSG00000068793	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs1109036	0.25	0.25	0.224	0.212061	0.2783	0.2748	0.3473	0.0893	0.1493	0.29	0.26	0.33	0.11	0.2679	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.876313	NA	NA	0.280349	0.110304	NA	0.109	NA	3.173451
1335	18	43262501	43262501	C	T	UTR3	SLC14A2	NM_001242692:c.*17C>T,NM_007163:c.*17C>T	NA	NA	ncRNA_UTR3	ENSG00000132874	NA	NA	NA	NA	NA	18q12.3	NA	NA	NA	NA	rs3745008	0.4	0.4	0.398	0.427716	0.4404	0.3869	0.3761	0.4024	0.5276	0.44	0.39	0.35	0.4	0.4361	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.865787	NA	NA	0.450116	0.390377	NA	0.29	NA	3.173384
1335	11	1213804	1213804	T	C	intergenic	MUC2,MUC5B	dist=109387;dist=30491	NA	NA	intergenic	ENSG00000215182,ENSG00000117983	dist=51443;dist=30492	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs77998608	0.08	0.08	0.065	0.0523163	0.16	0.003	0.0663	0.0076	0.0429	0.16	0.0035	0.09	0.02	NA	0.16	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.699572	NA	NA	NA	NA	NA	NA	NA	3.1733334
1335	19	23414167	23414167	T	G	ncRNA_intronic	ZNF724P	NA	NA	NA	intronic	ENSG00000196081	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs4932841	0.53	0.53	0.476	0.50639	0.6014	0.6627	0.6398	0.1982	0.5695	0.62	0.67	0.59	0.21	0.5588	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.014502	NA	NA	NA	NA	NA	0.377	NA	3.1731333
1335	19	4180690	4180690	T	G	intronic	SIRT6	NA	NA	NA	intronic	ENSG00000077463	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs7260071	0.75	0.75	0.762	0.73103	0.827	0.7014	0.6816	0.6793	0.7679	0.83	0.72	0.72	0.69	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.214538	NA	NA	NA	NA	NA	0.768	NA	3.173
1335	14	106236143	106236143	G	A	intergenic	ELK2AP,KIAA0125	dist=96999;dist=147695	NA	NA	exonic	ENSG00000211897	NA	unknown	UNKNOWN	NA	NA	14q32.33	NA	NA	NA	NA	rs74093865	0.36	0.36	0.305	0.316494	0.3439	0.3591	0.5216	0.0257	0.4918	0.39	0.51	0.51	0.04	0.3393	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.627637	NA	0.04	0.311185	0.074409	NA	0.13	NA	3.1722817
1335	6	29895973	29895973	C	G	intergenic	HCG4B,HLA-A	dist=2545;dist=14274	NA	NA	ncRNA_exonic	ENSG00000230795	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs9259842	0.88	0.88	0.896	0.911142	0.828	0.9722	0.8934	0.9236	0.9294	0.81	0.96	0.86	0.92	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.668538	NA	NA	NA	NA	NA	0.63	NA	3.172
1335	10	43657811	43657811	T	G	intronic	CSGALNACT2	NA	NA	NA	intronic	ENSG00000169826	NA	NA	NA	NA	NA	10q11.21	NA	NA	NA	NA	rs2257767	0.77	0.77	0.776	0.769569	0.828	0.4821	0.7911	0.9894	0.6933	0.82	0.5	0.83	0.99	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.072255	3.072255	NA	NA	NA	NA	0.862	NA	3.172
1335	2	187498107	187498107	T	C	intronic	ITGAV	NA	NA	NA	intronic	ENSG00000138448	NA	NA	NA	NA	NA	2q32.1	NA	NA	NA	NA	rs9333289	0.18	0.18	0.156	0.179513	0.2972	0.1478	0.2233	0.0098	0.2894	0.31	0.13	0.23	0.01	0.2493	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.990363	2.990363	NA	0.281744	0.055379	NA	0.08	NA	3.171756
1335	21	43338948	43338948	A	C	intronic	C2CD2	NA	NA	NA	intronic	ENSG00000157617	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs2245127	0.2	0.2	0.168	0.180312	0.2873	0.1558	0.2176	0.0575	0.2352	0.28	0.16	0.24	0.08	0.2558	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.547726	NA	NA	0.285581	0.093509	NA	0.246	NA	3.171319
1335	14	101433469	101433469	A	T	upstream;downstream	SNORD114-11;SNORD114-10	NA	NA	NA	upstream;downstream	ENSG00000200608,ENSG00000271417;ENSG00000200279,ENSG00000232018	NA	NA	NA	NA	NA	14q32.31	NA	NA	NA	NA	rs67466596	0.16	0.16	0.125	0.195288	0.163	0.0516	0.3012	0.1551	0.3558	0.16	0.06	0.27	0.2	0.1891	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.601219	NA	NA	0.143395	0.127854	NA	0.174	NA	3.1711716
1335	9	136083801	136083801	A	G	intronic	OBP2B	NA	NA	NA	intronic	ENSG00000171102	NA	NA	NA	NA	NA	9q34.2	NA	NA	NA	NA	rs4310274	0.79	0.79	0.804	0.764776	0.829	0.6369	0.8559	0.8979	0.5859	0.82	0.64	0.85	0.85	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.004281	NA	NA	NA	NA	NA	0.674	NA	3.171
1335	11	123470174	123470174	C	T	intronic	GRAMD1B	NA	NA	NA	intronic	ENSG00000023171	NA	NA	NA	NA	NA	11q24.1	NA	NA	NA	NA	rs1275082	0.87	0.87	0.862	0.871805	0.829	0.997	0.8646	0.767	0.9335	0.83	1	0.84	0.79	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.569836	NA	NA	NA	NA	NA	0.92	NA	3.171
1335	8	23301340	23301340	A	C	intronic	ENTPD4	NA	NA	NA	intronic	ENSG00000197217	NA	NA	NA	NA	NA	8p21.2	NA	NA	NA	NA	rs11787224	0.31	0.31	0.319	0.325679	0.2634	0.4355	0.2277	0.2867	0.3988	0.27	0.44	0.24	0.28	0.2952	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.128222	2.128222	NA	0.270698	0.297549	NA	0.406	NA	3.170702
1335	2	170463551	170463551	T	G	intronic	PPIG	NA	NA	NA	intronic	ENSG00000138398	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	rs2592813	0.36	0.36	0.314	0.347045	0.4294	0.3958	0.4827	0.1831	0.3374	0.43	0.37	0.42	0.21	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.075756	NA	NA	0.4	0.20737	NA	0.326	NA	3.1706
1335	5	14610184	14610184	C	G	intronic	FAM105A	NA	NA	NA	intronic	ENSG00000145569	NA	NA	NA	NA	NA	5p15.2	NA	NA	NA	NA	rs25960	0.71	0.71	0.678	0.683706	0.83	0.8026	0.8329	0.2557	0.8834	0.84	0.83	0.83	0.29	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.105162	NA	NA	NA	NA	NA	0.623	NA	3.17
1335	7	6088349	6088349	A	G	intronic	EIF2AK1	NA	NA	NA	intronic	ENSG00000086232	NA	NA	NA	NA	NA	7p22.1	NA	NA	NA	NA	rs523276	0.86	0.86	0.883	0.84984	0.83	0.875	0.7637	0.9138	0.819	0.83	0.92	0.76	0.92	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.062048	NA	NA	NA	NA	NA	0.899	NA	3.17
1335	9	33344252	33344252	T	A	intronic	NFX1	NA	NA	NA	intronic	ENSG00000086102	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs642157	0.82	0.82	0.813	0.819688	0.83	0.8373	0.8285	0.8116	0.7955	0.84	0.83	0.79	0.79	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.844892	NA	NA	NA	NA	NA	0.826	NA	3.17
1335	21	32524852	32524852	A	G	intronic	TIAM1	NA	NA	NA	intronic	ENSG00000156299	NA	NA	NA	NA	NA	21q22.11	NA	NA	NA	NA	rs9305453	0.86	0.86	0.869	0.878195	0.83	0.7768	0.9193	0.9682	0.8814	0.82	0.78	0.91	0.98	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.804156	NA	NA	NA	NA	NA	0.935	NA	3.17
1335	19	901955	901955	C	T	intronic	R3HDM4	NA	NA	NA	intronic	ENSG00000198858	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs4343405	0.18	0.18	0.175	0.171526	0.2863	NA	0.2061	0.1846	0.1881	0.28	NA	0.24	0.18	0.2376	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.133658	NA	NA	0.306163	0.19655	NA	0.174	NA	3.169937
1335	5	138221989	138221989	G	C	intronic	CTNNA1	NA	NA	NA	intronic	ENSG00000044115	NA	NA	NA	NA	NA	5q31.2	NA	NA	NA	NA	rs288028	0.18	0.18	0.16	0.185703	0.2664	0.0079	0.2464	0.1936	0.2321	0.27	0.01	0.26	0.19	0.2654	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.780146	NA	NA	0.298372	0.210849	NA	0.196	NA	3.169828
1335	2	113888579	113888579	T	C	intronic	IL1RN	NA	NA	NA	intronic	ENSG00000136689	NA	NA	NA	NA	NA	2q13	NA	NA	NA	NA	rs432014	0.21	0.21	0.177	0.221046	0.2922	0.0942	0.3415	0.1354	0.3088	0.29	0.08	0.35	0.15	0.2597	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.478862	1.478862	NA	0.278488	0.154789	NA	0.275	NA	3.169612
1335	1	156256000	156256000	T	C	intronic	TMEM79	NA	NA	NA	intronic	ENSG00000163472	NA	NA	NA	NA	NA	1q22	NA	NA	NA	NA	rs6679145	0.21	0.21	0.192	0.20647	0.2694	0.2272	0.2795	0.0923	0.2229	0.27	0.24	0.23	0.09	0.2677	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.203225	NA	NA	0.293372	0.123014	NA	0.217	NA	3.169528
1335	16	28132951	28132951	T	C	intronic	XPO6	NA	NA	NA	intronic	ENSG00000169180	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs33048	0.23	0.23	0.219	0.220447	0.2793	0.1032	0.2579	0.326	0.1115	0.29	0.06	0.26	0.31	0.2554	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.076616	NA	NA	0.295881	0.318012	NA	0.232	NA	3.169419
1335	10	49450443	49450443	A	G	intronic	FRMPD2	NA	NA	NA	intronic	ENSG00000170324	NA	NA	NA	NA	NA	10q11.22	NA	Name=CTCF_(SC-5916),CTCF	Name=2	NA	rs280612	0.89	0.89	0.882	0.882388	0.9453	0.999	0.938	0.6536	0.9673	0.94	1	0.92	0.67	0.9331	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.099817	NA	NA	0.952381	0.725265	NA	0.739	NA	3.169219
1335	17	40735641	40735641	C	T	intronic	FAM134C	NA	NA	NA	intronic	ENSG00000141699	NA	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs10454087	0.29	0.29	0.301	0.324481	0.2654	0.4514	0.2061	0.1944	0.5143	0.28	0.44	0.19	0.22	0.2924	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.081246	NA	NA	0.273023	0.198593	NA	0.391	NA	3.169177
1335	2	128342547	128342547	G	A	intronic	MYO7B	NA	NA	NA	intronic	ENSG00000169994	NA	NA	NA	NA	NA	2q14.3	NA	NA	NA	NA	rs4662741	0.92	0.92	0.924	0.91873	0.831	0.9861	0.9207	0.9879	0.8446	0.85	0.99	0.91	0.98	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.458038	NA	NA	NA	NA	NA	0.848	NA	3.169
1335	16	142825	142825	T	C	intronic	NPRL3	NA	NA	NA	intronic	ENSG00000103148	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs2541618	0.79	0.79	0.776	0.805312	0.831	0.7113	0.8631	0.8056	0.8344	0.84	0.69	0.87	0.78	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.547127	NA	NA	NA	NA	NA	0.833	NA	3.169
1335	1	156263097	156263097	A	G	intronic	C1orf85	NA	NA	NA	intronic	ENSG00000198715	NA	NA	NA	NA	NA	1q22	NA	NA	NA	NA	rs10908494	0.21	0.21	0.181	0.20647	0.2694	0.2272	0.2795	0.0923	0.2229	0.27	0.24	0.23	0.09	0.2688	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.913828	2.913828	NA	0.292907	0.123241	NA	0.217	NA	3.168893
1335	5	135391326	135391326	A	G	intronic	TGFBI	NA	NA	NA	intronic	ENSG00000120708	NA	NA	NA	NA	NA	5q31.1	NA	NA	NA	NA	rs6860369	0.37	0.37	0.417	0.404153	0.2594	0.3433	0.2478	0.6702	0.3671	0.27	0.34	0.25	0.67	0.3082	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.341597	1.341597	NA	0.263804	0.604078	NA	0.377	NA	3.168596
1335	2	189855674	189855674	T	A	intronic	COL3A1	NA	NA	NA	intronic	ENSG00000168542	NA	NA	NA	NA	NA	2q32.2	NA	NA	NA	NA	rs2203601	0.38	0.38	0.34	0.370208	0.4215	0.6091	0.4539	0.0431	0.454	0.42	0.59	0.41	0.06	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.135883	NA	NA	0.410063	0.112717	NA	0.326	NA	3.168437
1335	7	100552788	100552788	C	T	intergenic	ACHE,MUC12	dist=59247;dist=60116	NA	NA	intronic	ENSG00000169894	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs73398800	NA	NA	NA	0.0113818	NA	NA	0.0058	0.0401	NA	NA	NA	NA	NA	0.4984	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.117707	NA	NA	NA	NA	NA	0.5	NA	3.1682667
1335	18	5956425	5956425	C	T	intronic	L3MBTL4	NA	NA	NA	ncRNA_intronic	ENSG00000265487	NA	NA	NA	NA	NA	18p11.31	NA	NA	NA	NA	rs3737354	0.38	0.38	0.362	0.386581	0.3976	0.4742	0.2723	0.2995	0.4836	0.41	0.47	0.28	0.32	0.3835	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.055139	NA	NA	0.384076	0.293793	NA	0.37	NA	3.1681573
1335	8	37693302	37693302	T	C	intronic	GPR124	NA	NA	NA	intronic	ENSG00000020181	NA	NA	NA	NA	NA	8p11.23	NA	Name=Egr-1,YY1,TBP,E2F6,PU.1,Pol2,HMGN3,E2F6_(H-50),TAF1	Name=10	NA	rs10101560	0.98	0.98	0.97	0.978834	0.9423	0.999	0.9813	0.9992	0.9663	0.94	1	0.98	1	0.9539	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.229598	NA	NA	0.935769	0.984091	NA	0.964	NA	3.168031
1335	11	62123989	62123989	T	A	intronic	ASRGL1	NA	NA	NA	intronic	ENSG00000162174	NA	NA	NA	NA	NA	11q12.3	NA	NA	NA	NA	rs67821209	0.23	0.23	0.212	0.232029	0.2893	0.2431	0.2882	0.0492	0.3691	0.29	0.28	0.27	0.06	0.2818	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.39956	NA	NA	0.260875	0.084015	NA	0.246	NA	3.168025
1335	1	151395782	151395782	T	C	intronic	POGZ	NA	NA	NA	intronic	ENSG00000143442	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs2274533	0.54	0.54	0.557	0.552516	0.832	0.2113	0.4769	0.556	0.6656	0.84	0.18	0.54	0.5	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.017123	NA	NA	NA	NA	NA	0.696	NA	3.168
1335	1	244601152	244601152	C	T	intronic	ADSS	NA	NA	NA	intronic	ENSG00000035687	NA	NA	NA	NA	NA	1q44	NA	NA	NA	NA	rs3127465	0.83	0.83	0.832	0.821685	0.832	0.7718	0.8545	0.9455	0.6718	0.82	0.75	0.86	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.348731	NA	NA	NA	NA	NA	0.819	NA	3.168
1335	6	29149442	29149442	A	G	intergenic	OR2J2,OR14J1	dist=7091;dist=125025	NA	NA	ncRNA_exonic	ENSG00000224233	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs3116816	0.75	0.75	0.748	0.749201	0.832	0.5942	0.7493	0.7685	0.7975	0.85	0.57	0.74	0.8	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.510151	NA	NA	NA	NA	NA	0.79	NA	3.168
1335	11	10518289	10518289	T	C	intronic	AMPD3	NA	NA	NA	intronic	ENSG00000133805	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs1466426	0.75	0.75	0.74	0.726438	0.832	0.9385	0.6066	0.438	0.8742	0.84	0.94	0.63	0.47	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.466337	NA	NA	NA	NA	NA	0.746	NA	3.168
1335	17	74208424	74208424	G	A	intronic	RNF157	NA	NA	NA	UTR3	ENSG00000141576	ENST00000592271:c.*9C>T	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs9911122	0.31	0.31	0.294	0.271765	0.337	0.4603	0.2666	0.1029	0.2423	0.33	0.48	0.31	0.11	0.3149	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.123105	NA	NA	0.347093	0.144349	NA	0.312	NA	3.1676737
1335	4	39122577	39122577	A	G	intronic	KLHL5	NA	NA	NA	ncRNA_intronic	ENSG00000249207	NA	NA	NA	NA	NA	4p14	NA	NA	NA	NA	rs3733274	0.53	0.53	0.519	0.490016	0.5765	0.495	0.5951	0.3321	0.5348	0.59	0.52	0.62	0.39	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.527786	NA	NA	0.589566	0.382225	NA	0.514	NA	3.1672673
1335	5	33649807	33649807	C	A	intronic	ADAMTS12	NA	NA	NA	intronic	ENSG00000151388	NA	NA	NA	Score=529;Name=lod=188	NA	5p13.3	NA	NA	NA	NA	rs4504387	0.58	0.58	0.562	0.540335	0.6014	0.7143	0.6066	0.3585	0.4969	0.59	0.71	0.62	0.37	0.5892	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.041337	NA	NA	0.642326	0.437131	NA	0.478	NA	3.167074
1335	7	100552837	100552837	G	A	intergenic	ACHE,MUC12	dist=59296;dist=60067	NA	NA	intronic	ENSG00000169894	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs73714264	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4996	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.746781	NA	NA	NA	NA	NA	0.493	NA	3.1670667
1335	1	206772753	206772753	A	G	intronic	EIF2D	NA	NA	NA	intronic	ENSG00000143486	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs4845116	0.8	0.8	0.814	0.763179	0.833	0.6577	0.7795	0.8215	0.7096	0.84	0.74	0.8	0.83	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.354701	4.354701	NA	NA	NA	NA	0.71	NA	3.167
1335	3	64526717	64526717	G	C	intronic	ADAMTS9	NA	NA	NA	intronic	ENSG00000163638	NA	NA	NA	NA	NA	3p14.1	NA	NA	NA	NA	rs3796384	0.55	0.55	0.515	0.532348	0.833	0.4137	0.4726	0.2481	0.772	0.83	0.4	0.57	0.25	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.364097	NA	NA	NA	NA	NA	0.543	NA	3.167
1335	16	75263974	75263974	T	C	intronic	BCAR1	NA	NA	NA	intronic	ENSG00000050820	NA	NA	NA	NA	NA	16q23.1	NA	NA	NA	NA	rs6564241	0.92	0.92	0.922	0.939297	0.833	0.996	0.9164	0.9924	0.9346	0.83	0.99	0.91	0.99	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.062588	NA	NA	NA	NA	NA	0.891	NA	3.167
1335	15	41149161	41149161	G	C	exonic	SPINT1	NA	synonymous SNV	SPINT1:NM_001032367:exon10:c.G1530C:p.T510T,SPINT1:NM_003710:exon11:c.G1530C:p.T510T,SPINT1:NM_181642:exon11:c.G1578C:p.T526T	exonic	ENSG00000166145	NA	synonymous SNV	ENSG00000166145:ENST00000564375:exon7:c.G879C:p.T293T,ENSG00000166145:ENST00000431806:exon10:c.G1530C:p.T510T,ENSG00000166145:ENST00000344051:exon11:c.G1578C:p.T526T,ENSG00000166145:ENST00000562057:exon11:c.G1530C:p.T510T	NA	NA	15q15.1	NA	NA	NA	NA	rs690458	0.86	0.86	0.853	0.850839	0.83	0.9901	0.889	0.7368	0.8558	0.82	0.99	0.89	0.75	0.8513	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.226229	NA	NA	0.818372	0.753972	NA	0.87	NA	3.1669946
1335	7	100552854	100552854	G	A	intergenic	ACHE,MUC12	dist=59313;dist=60050	NA	NA	intronic	ENSG00000169894	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs73714265	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4998	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.104598	NA	NA	NA	NA	NA	0.493	NA	3.1668667
1335	22	31508966	31508966	A	G	intergenic	SELM,INPP5J	dist=5415;dist=9995	NA	NA	intronic	ENSG00000198832	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs4820940	0.31	0.31	0.302	0.328075	0.5	0.0327	0.4308	0.2602	0.4744	0.49	0.03	0.44	0.28	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.985708	NA	NA	NA	NA	NA	0.377	NA	3.1666667
1335	19	15838746	15838746	A	G	upstream	OR10H2	NA	NA	NA	upstream	ENSG00000171942	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs11672695	NA	NA	0.548	0.557708	0.5	0.9296	0.5764	0.2746	0.6033	NA	NA	NA	NA	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.487221	NA	NA	NA	NA	NA	0.486	NA	3.1666666
1335	19	46974307	46974307	C	T	UTR5	PNMAL1	NM_018215:c.-15G>A,NM_001103149:c.-15G>A	NA	NA	UTR5	ENSG00000182013	ENST00000438932:c.-15G>A,ENST00000313683:c.-15G>A,ENST00000602246:c.-15G>A	NA	NA	NA	NA	19q13.32	NA	Name=CTCF,ZNF263	NA	NA	rs3826852	0.74	0.74	0.741	0.752596	0.7048	0.8204	0.7867	0.6687	0.8211	0.7	0.85	0.74	0.67	0.7396	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.668329	NA	NA	0.722442	0.642987	NA	0.674	NA	3.1664914
1335	19	53345447	53345447	C	T	intronic	ZNF468	NA	NA	NA	intronic	ENSG00000198538,ENSG00000204604	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs60596790	0.25	0.25	0.262	0.317891	0.2654	0.1101	0.245	0.4198	0.5	0.26	0.1	0.25	0.4	0.2882	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.410658	NA	NA	0.280066	0.376286	NA	0.333	NA	3.166334
1335	3	169621973	169621973	G	A	intergenic	LRRC31,SAMD7	dist=34250;dist=7509	NA	NA	ncRNA_exonic	ENSG00000240128	NA	NA	NA	NA	NA	3q26.2	NA	NA	NA	NA	rs4955689	0.86	0.86	0.861	0.852037	0.834	0.872	0.9092	0.8578	0.8016	0.82	0.89	0.9	0.86	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.570208	NA	NA	NA	NA	NA	0.877	NA	3.166
1335	18	14613815	14613815	A	G	intergenic	POTEC,ANKRD30B	dist=70216;dist=134424	NA	NA	ncRNA_exonic	ENSG00000266693	NA	NA	NA	NA	NA	18p11.21	NA	NA	NA	NA	rs12960773	0.59	0.59	0.59	0.584665	0.834	0.4831	0.6902	0.3525	0.6718	0.78	0.45	0.67	0.38	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.069832	NA	NA	NA	NA	NA	NA	NA	3.166
1335	4	2717690	2717690	C	T	intronic	FAM193A	NA	NA	NA	intronic	ENSG00000125386	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs2295499	0.45	0.45	0.432	0.454673	0.4066	0.4018	0.5994	0.444	0.4703	0.43	0.43	0.54	0.43	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.133258	NA	NA	0.427404	0.450867	ID=COSN167142;OCCURENCE=1(large_intestine)	0.5	NA	3.165996
1335	21	43338175	43338175	C	T	intronic	C2CD2	NA	NA	NA	intronic	ENSG00000157617	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs3827223	0.22	0.22	0.193	0.199481	0.2883	0.1548	0.2205	0.1241	0.2413	0.28	0.16	0.24	0.16	0.2601	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.11857	NA	NA	0.285698	0.144349	NA	0.275	NA	3.165902
1335	18	43262532	43262532	C	A	UTR3	SLC14A2	NM_001242692:c.*48C>A,NM_007163:c.*48C>A	NA	NA	ncRNA_UTR3	ENSG00000132874	NA	NA	NA	NA	NA	18q12.3	NA	NA	NA	NA	rs3745007	0.42	0.42	0.414	0.450679	0.4404	0.3879	0.389	0.4811	0.5286	0.44	0.39	0.37	0.46	0.4426	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.20054	NA	NA	0.451279	0.455288	NA	0.326	NA	3.165721
1336	6	32011714	32011714	A	G	intronic	TNXB	NA	NA	NA	intronic	ENSG00000168477	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs397948	NA	NA	0.2	0.551717	0.4155	0.5179	0.4092	0.7383	0.5757	NA	NA	NA	NA	0.4203	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.45683	NA	NA	NA	NA	NA	0.254	NA	3.1642
1336	16	30505512	30505512	C	T	intronic	ITGAL	NA	NA	NA	intronic	ENSG00000005844	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs1978079	0.23	0.23	0.265	0.383187	0.2913	0.1161	0.2118	0.5318	0.6738	0.25	0.06	0.21	0.42	0.3144	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.915454	NA	NA	0.230116	0.425125	NA	NA	NA	3.164184
1336	3	75986794	75986794	G	A	intergenic	ZNF717,ROBO2	dist=152539;dist=1102500	NA	NA	intronic	ENSG00000185008	NA	NA	NA	NA	NA	3p12.3	NA	NA	NA	NA	rs80235520	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.5029	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.535883	NA	NA	NA	NA	NA	NA	NA	3.1637667
1336	17	53042017	53042017	C	G	intronic	COX11	NA	NA	NA	intronic	ENSG00000166260	NA	NA	NA	NA	NA	17q22	NA	NA	NA	NA	rs55801837	0.24	0.24	0.241	0.26238	0.2704	0.1052	0.2262	0.3555	0.316	0.27	0.09	0.26	0.37	0.2731	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.108185	NA	NA	0.292831	0.352701	NA	0.312	NA	3.163669
1336	7	21945086	21945086	C	A	intronic	CDCA7L	NA	NA	NA	intronic	ENSG00000164649	NA	NA	NA	NA	NA	7p15.3	NA	NA	NA	NA	rs6953368	0.19	0.19	0.186	0.192093	0.2972	0.123	0.1844	0.1445	0.2249	0.29	0.1	0.18	0.13	0.2477	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.167964	NA	NA	0.291696	0.170903	NA	0.188	NA	3.163404
1336	16	55847051	55847051	C	T	intronic	CES1	NA	NA	NA	intronic	ENSG00000198848	NA	NA	NA	NA	NA	16q12.2	NA	NA	NA	NA	rs3859093	0.65	0.65	0.622	0.609225	0.837	0.3948	0.7075	0.5779	0.5685	0.85	0.39	0.74	0.58	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.604321	NA	NA	NA	NA	NA	0.609	NA	3.163
1336	16	89212200	89212200	A	G	intronic	ACSF3	NA	NA	NA	intronic	ENSG00000176715	NA	NA	NA	NA	NA	16q24.3	NA	NA	NA	NA	rs4302032	0.69	0.69	0.672	0.656949	0.837	0.6716	0.5735	0.5068	0.7188	0.84	0.67	0.63	0.52	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.744253	NA	NA	NA	NA	NA	0.558	NA	3.163
1336	20	56078690	56078690	G	A	intronic	CTCFL	NA	NA	NA	intronic	ENSG00000124092	NA	NA	NA	NA	NA	20q13.31	NA	NA	NA	NA	rs6128059	0.2	0.2	0.2	0.213858	0.2793	0.2083	0.1671	0.0998	0.3395	0.28	0.18	0.17	0.11	0.2591	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.570807	NA	NA	0.298837	0.114389	NA	0.217	NA	3.162763
1336	18	29419462	29419462	C	A	intronic	TRAPPC8	NA	NA	NA	intronic	ENSG00000153339	NA	NA	NA	NA	NA	18q12.1	NA	NA	NA	NA	rs7226615	0.3	0.3	0.284	0.332668	0.2565	0.5069	0.2003	0.1717	0.5429	0.28	0.49	0.21	0.18	0.3158	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.071731	NA	NA	0.265097	0.164676	NA	0.246	NA	3.162603
1336	5	101726770	101726770	T	C	intronic	SLCO6A1	NA	NA	NA	intronic	ENSG00000205359	NA	NA	NA	NA	NA	5q21.1	NA	NA	NA	NA	rs10073892	0.18	0.18	0.153	0.154752	0.3111	0.1478	0.1671	0.0204	0.1738	0.3	0.14	0.19	0.03	0.2426	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.117522	NA	NA	0.283721	0.05606	NA	0.239	NA	3.162579
1336	2	71747851	71747851	T	C	intronic	DYSF	NA	NA	NA	intronic	ENSG00000135636	NA	NA	NA	NA	NA	2p13.2	NA	NA	NA	NA	rs12713755	0.67	0.67	0.69	0.65615	0.838	0.2361	0.7161	0.8986	0.5317	0.83	0.2	0.73	0.91	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.480329	1.480329	NA	NA	NA	NA	0.783	NA	3.162
1336	2	241533845	241533845	T	C	intronic	CAPN10	NA	NA	NA	intronic	ENSG00000142330	NA	NA	NA	NA	NA	2q37.3	NA	NA	NA	NA	rs2975763	0.92	0.92	0.9	0.899161	0.838	0.9841	0.9078	0.9433	0.8088	0.84	0.99	0.91	0.94	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.544171	NA	NA	NA	NA	NA	0.935	NA	3.162
1336	2	241534381	241534381	A	G	intronic	CAPN10	NA	NA	NA	intronic	ENSG00000142330	NA	NA	NA	NA	NA	2q37.3	NA	NA	NA	NA	rs2975764	0.86	0.86	0.819	0.838858	0.838	0.9851	0.8847	0.73	0.8037	0.84	0.99	0.89	0.72	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.511851	NA	NA	NA	NA	NA	0.877	NA	3.162
1336	2	90259848	90259848	T	G	intergenic	MIR4436A,LOC654342	dist=1147880;dist=1564861	NA	NA	intronic	ENSG00000239819	NA	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs842155	0.21	0.21	0.236	0.240815	0.169	0.0853	0.147	0.5461	0.1288	0.17	0.08	0.12	0.5	0.1713	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.74529	NA	NA	0.164424	0.504595	NA	0.203	NA	3.1619427
1336	1	202121643	202121643	G	A	intronic	PTPN7	NA	NA	NA	intronic	ENSG00000143851	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs10920337	0.4	0.4	0.418	0.438698	0.2565	0.37	0.3602	0.7247	0.3661	0.26	0.37	0.34	0.71	0.3336	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.424766	NA	NA	0.247965	0.61961	NA	0.413	NA	3.161935
1336	3	125734465	125734465	G	A	intronic	SLC41A3	NA	NA	NA	intronic	ENSG00000114544	NA	NA	NA	NA	NA	3q21.2	NA	NA	NA	NA	rs9862310	0.31	0.31	0.325	0.328874	0.2843	0.1825	0.2925	0.5439	0.2607	0.27	0.19	0.28	0.51	0.2875	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.679346	NA	NA	0.266395	0.498865	NA	0.341	NA	3.161805
1336	21	45089877	45089877	G	A	intronic	RRP1B	NA	NA	NA	intronic	ENSG00000160208	NA	NA	NA	NA	NA	21q22.3	NA	Name=BCL3,NANOG_(SC-33759)	NA	NA	rs2838344	0.64	0.64	0.603	0.640775	0.6074	0.8353	0.7219	0.4244	0.7096	0.6	0.83	0.67	0.47	0.6444	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.064446	NA	NA	0.586512	0.465956	ID=COSN166669;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.572	NA	3.161688
1336	16	78148830	78148830	C	T	intronic	WWOX	NA	NA	NA	intronic	ENSG00000186153	NA	NA	NA	NA	NA	16q23.1	NA	NA	NA	NA	rs12934051	0.2	0.2	0.173	0.173722	0.2763	0.2083	0.1974	0.0144	0.2311	0.3	0.22	0.24	0.01	0.2574	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.875112	NA	NA	0.304896	0.065493	ID=COSN165264;OCCURENCE=1(breast)	0.123	NA	3.161404
1336	6	89862725	89862725	T	C	intronic	PM20D2	NA	NA	NA	intronic	ENSG00000146281	NA	NA	NA	NA	NA	6q15	NA	NA	NA	NA	rs6937095	0.18	0.18	0.162	0.204473	0.2893	0.125	0.1643	0.1452	0.3078	0.27	0.11	0.18	0.13	0.2564	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.82385	NA	NA	0.292907	0.167878	ID=COSN167853;OCCURENCE=1(large_intestine)	0.203	NA	3.161393
1336	8	131414083	131414083	A	G	intronic	ASAP1	NA	NA	NA	intronic	ENSG00000153317	NA	NA	NA	NA	NA	8q24.21	NA	NA	NA	NA	rs10090231	0.29	0.29	0.286	0.285144	0.2783	0.0764	0.2954	0.5113	0.1943	0.28	0.09	0.3	0.51	0.2647	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.002025	NA	NA	0.295698	0.448025	ID=COSN168431;OCCURENCE=1(large_intestine)	0.377	NA	3.161302
1336	22	50678571	50678571	T	C	intronic	TUBGCP6	NA	NA	NA	intronic	ENSG00000128159	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs5771109	0.38	0.38	0.384	0.384185	0.4056	0.3601	0.2839	0.444	0.3773	0.4	0.34	0.26	0.49	0.4332	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.815062	NA	NA	NA	NA	NA	0.362	NA	3.1612
1336	19	6230771	6230771	T	G	intronic	MLLT1	NA	NA	NA	intronic	ENSG00000130382	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs2233185	0.37	0.37	0.389	0.401158	0.2664	0.1567	0.366	0.7549	0.3384	0.26	0.16	0.36	0.76	0.302	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.672954	NA	NA	0.270698	0.661598	NA	0.42	NA	3.160902
1336	12	11338614	11338614	A	G	exonic	TAS2R42	NA	synonymous SNV	TAS2R42:NM_181429:exon1:c.T930C:p.N310N	exonic	ENSG00000186136	NA	synonymous SNV	ENSG00000186136:ENST00000334266:exon1:c.T930C:p.N310N	NA	NA	12p13.2	NA	NA	NA	NA	rs1669411	0.67	0.67	0.759	0.760783	0.8688	0.9514	0.8473	0.407	0.8701	0.73	0.86	0.74	0.31	0.8371	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.691319	NA	NA	0.799884	0.393781	NA	NA	NA	3.1608826
1336	19	47912323	47912323	T	G	intronic	MEIS3	NA	NA	NA	intronic	ENSG00000105419	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs2272294	0.25	0.25	0.24	0.268371	0.2813	0.1528	0.3141	0.2693	0.3405	0.29	0.12	0.31	0.3	0.2795	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.337389	NA	NA	0.278372	0.257376	NA	0.203	NA	3.160828
1336	14	100317376	100317376	G	A	intronic	EML1	NA	NA	NA	intronic	ENSG00000066629	NA	NA	NA	NA	NA	14q32.2	NA	NA	NA	NA	rs72708401	0.18	0.18	0.168	0.14976	0.2992	0.1359	0.1671	0.0552	0.1258	0.3	0.12	0.19	0.04	0.2493	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.075302	NA	NA	0.290698	0.09941	NA	0.297	NA	3.160802
1336	20	62576991	62576991	G	A	intronic	UCKL1	NA	NA	NA	intronic	ENSG00000198276	NA	NA	NA	NA	NA	20q13.33	NA	NA	NA	NA	rs2252258	0.32	0.32	0.347	0.341254	0.2813	0.3234	0.196	0.5151	0.2894	0.27	0.3	0.23	0.5	0.2901	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.282222	NA	NA	0.268273	0.476169	NA	0.406	NA	3.160327
1336	2	29519622	29519622	C	T	intronic	ALK	NA	NA	NA	intronic	ENSG00000171094	NA	NA	NA	NA	NA	2p23.2	NA	NA	NA	NA	rs2272409	0.73	0.73	0.686	0.704673	0.84	0.8244	0.8473	0.379	0.7812	0.83	0.82	0.83	0.39	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.256233	NA	NA	NA	NA	NA	0.645	NA	3.16
1336	3	10251196	10251196	A	G	intronic	IRAK2	NA	NA	NA	intronic	ENSG00000134070	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs459864	0.65	0.65	0.64	0.608626	0.84	0.4494	0.7277	0.5121	0.5808	0.84	0.48	0.72	0.52	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.261957	NA	NA	NA	NA	NA	0.754	NA	3.16
1336	16	78149067	78149067	A	C	intronic	WWOX	NA	NA	NA	intronic	ENSG00000186153	NA	NA	NA	NA	NA	16q23.1	NA	NA	NA	NA	rs12934985	0.2	0.2	0.174	0.175919	0.2763	0.2163	0.1974	0.0144	0.2342	0.3	0.23	0.24	0.01	0.2582	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.119868	NA	NA	0.305542	0.063755	ID=COSN165265;OCCURENCE=1(breast)	0.123	NA	3.159958
1336	2	44548613	44548613	T	C	intronic	PREPL	NA	NA	NA	UTR3	ENSG00000138078,ENSG00000138079	ENST00000420756:c.*230A>G;ENST00000260649:c.*835T>C	NA	NA	NA	NA	2p21	NA	Name=MafK_(SC-477),MafF_(M8194),MafK_(ab50322)	NA	NA	rs2241871	0.6	0.6	0.632	0.624601	0.666	0.3284	0.6138	0.7859	0.6769	0.66	0.35	0.64	0.77	0.6587	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.267159	NA	NA	0.682135	0.759991	NA	0.667	NA	3.1598317
1336	13	111109859	111109859	A	G	intronic	COL4A2	NA	NA	NA	ncRNA_intronic	ENSG00000224821	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs9515218	0.5	0.5	0.506	0.489617	0.5974	0.2232	0.4942	0.6437	0.4417	0.6	0.2	0.56	0.66	0.5764	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.572237	NA	NA	NA	NA	NA	0.5	NA	3.1595333
1336	16	28847246	28847246	T	C	intronic	ATXN2L	NA	NA	NA	ncRNA_intronic	ENSG00000260570	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs12928404	0.44	0.44	0.398	0.45607	0.3459	0.4712	0.5692	0.5378	0.363	0.36	0.46	0.51	0.49	0.4404	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.505938	NA	NA	0.387555	0.521858	NA	0.341	NA	3.1594783
1336	20	13071871	13071871	C	A	intronic	SPTLC3	NA	NA	NA	intronic	ENSG00000172296	NA	NA	NA	NA	NA	20p12.1	NA	NA	NA	NA	rs243874	0.26	0.26	0.256	0.246206	0.2913	0.0774	0.2594	0.3964	0.1616	0.29	0.06	0.29	0.4	0.2552	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.040416	3.040416	NA	0.294025	0.376243	NA	0.333	NA	3.159475
1336	11	107852281	107852281	C	T	intergenic	RAB39A,CUL5	dist=18073;dist=27127	NA	NA	intergenic	ENSG00000179331,ENSG00000166266	dist=18073;dist=27178	NA	NA	NA	NA	11q22.3	NA	NA	NA	NA	rs11603234	0.14	0.14	0.154	0.160343	0.174	0.0317	0.098	0.2549	0.1953	0.18	0.03	0.09	0.26	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.519579	NA	NA	NA	NA	NA	0.174	NA	3.1593334
1336	16	16110244	16110244	C	G	intronic	ABCC1	NA	NA	NA	intronic	ENSG00000103222	NA	NA	NA	NA	NA	16p13.11	NA	NA	NA	NA	rs185005	0.76	0.76	0.732	0.730431	0.841	0.744	0.8718	0.6974	0.547	0.83	0.71	0.84	0.67	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.760001	NA	NA	NA	NA	NA	0.79	NA	3.159
1336	16	16110253	16110253	T	C	intronic	ABCC1	NA	NA	NA	intronic	ENSG00000103222	NA	NA	NA	NA	NA	16p13.11	NA	NA	NA	NA	rs246215	0.76	0.76	0.726	0.730631	0.841	0.744	0.8718	0.6974	0.5481	0.83	0.71	0.84	0.67	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.86972	NA	NA	NA	NA	NA	0.797	NA	3.159
1336	19	46331302	46331302	C	G	intronic	SYMPK	NA	NA	NA	intronic	ENSG00000125755	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs4239535	0.86	0.86	0.852	0.852236	0.841	0.9048	0.7622	0.8858	0.8282	0.84	0.91	0.79	0.88	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.771511	NA	NA	NA	NA	NA	0.913	NA	3.159
1336	19	48382157	48382157	T	C	intronic	SULT2A1	NA	NA	NA	intronic	ENSG00000105398	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs2547239	0.93	0.93	0.93	0.9375	0.841	0.996	0.938	0.997	0.8957	0.84	1	0.93	0.99	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.303352	NA	NA	NA	NA	NA	0.841	NA	3.159
1336	12	124139597	124139597	A	G	intronic	GTF2H3	NA	NA	NA	intronic	ENSG00000111358	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs4930737	0.17	0.17	0.17	0.171925	0.2813	0.0278	0.1628	0.1573	0.2342	0.29	0.03	0.17	0.14	0.2545	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.009295	NA	NA	0.305544	0.188772	NA	0.152	NA	3.158656
1336	17	48735774	48735774	G	A	intronic	ABCC3	NA	NA	NA	intronic	ENSG00000108846	NA	NA	NA	NA	NA	17q21.33	NA	NA	NA	NA	rs739923	0.26	0.26	0.244	0.314896	0.2803	0.2431	0.2911	0.2632	0.5112	0.28	0.25	0.28	0.23	0.2906	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.228661	NA	NA	0.270698	0.252837	NA	0.304	NA	3.158402
1336	3	125741592	125741592	C	T	intronic	SLC41A3	NA	NA	NA	intronic	ENSG00000114544	NA	NA	NA	NA	NA	3q21.2	NA	NA	NA	NA	rs3817079	0.31	0.31	0.314	0.330471	0.2853	0.1825	0.2896	0.5499	0.2618	0.27	0.19	0.28	0.51	0.2896	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.469758	NA	NA	0.26686	0.509079	NA	0.333	NA	3.15824
1336	2	98811075	98811075	A	G	intronic	VWA3B	NA	NA	NA	intronic	ENSG00000168658	NA	NA	NA	NA	NA	2q11.2	NA	NA	NA	NA	rs7579916	0.92	0.92	0.919	0.925919	0.8419	0.9841	0.8905	0.9455	0.9509	0.85	0.99	0.9	0.95	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.893467	NA	NA	NA	NA	NA	0.906	NA	3.1581
1336	5	14366840	14366840	T	C	intronic	TRIO	NA	NA	NA	intronic	ENSG00000038382	NA	NA	NA	NA	NA	5p15.2	NA	NA	NA	NA	rs30784	0.83	0.83	0.828	0.817891	0.8419	0.7282	0.817	0.9539	0.7025	0.85	0.73	0.8	0.94	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.473332	NA	NA	NA	NA	NA	0.841	NA	3.1581
1336	9	136561567	136561567	G	T	intronic	SARDH	NA	NA	NA	intronic	ENSG00000123453	NA	NA	NA	NA	NA	9q34.2	NA	NA	NA	NA	rs2427998	0.85	0.85	0.825	0.775759	0.8419	0.9325	0.8501	0.7587	0.5164	0.84	0.94	0.84	0.76	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.660156	NA	NA	NA	NA	NA	0.761	NA	3.1581
1336	19	19751456	19751456	C	A	intronic	GMIP	NA	NA	NA	intronic	ENSG00000089639	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs2043293	0.82	0.82	0.827	0.814097	0.8419	0.7629	0.7867	0.8638	0.7904	0.84	0.77	0.8	0.86	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.914245	NA	NA	NA	NA	NA	0.848	NA	3.1581
1336	1	154524973	154524973	A	G	intronic	UBE2Q1	NA	NA	NA	intronic	ENSG00000160714	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs12144146	0.16	0.16	0.142	0.129193	0.3052	0.0169	0.2522	0.0144	0.1319	0.31	0.02	0.23	0.02	0.2316	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.904239	NA	NA	0.305465	0.061734	NA	0.232	NA	3.157735
1336	10	99229394	99229394	G	A	intronic	MMS19	NA	NA	NA	intronic	ENSG00000155229	NA	NA	NA	NA	NA	10q24.1	NA	NA	NA	NA	rs2275583	0.32	0.32	0.308	0.324081	0.2694	0.4861	0.3184	0.1974	0.3885	0.27	0.49	0.31	0.2	0.2975	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.544165	NA	NA	0.275814	0.186791	NA	0.21	NA	3.157286
1336	6	152489038	152489038	T	C	intronic	SYNE1	NA	NA	NA	intronic	ENSG00000131018	NA	NA	NA	NA	NA	6q25.1	NA	NA	Name=9	NA	rs997769	0.66	0.66	0.687	0.717851	0.5785	0.876	0.7176	0.6407	0.8027	0.51	0.88	0.66	0.65	0.6711	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.057394	NA	NA	0.593277	0.63409	NA	0.572	NA	3.157123
1336	12	55771062	55771062	A	G	intergenic	OR6C75,OR6C65	dist=11229;dist=23251	NA	NA	ncRNA_exonic	ENSG00000203408	NA	NA	NA	NA	NA	12q13.2	NA	NA	NA	NA	rs7488143	0.87	0.87	0.836	0.878395	0.8429	0.996	0.902	0.7519	0.9479	0.84	0.99	0.9	0.74	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.687412	2.687412	NA	NA	NA	NA	0.797	NA	3.1571
1336	12	55771125	55771125	A	G	intergenic	OR6C75,OR6C65	dist=11292;dist=23188	NA	NA	ncRNA_exonic	ENSG00000203408	NA	NA	NA	NA	NA	12q13.2	NA	NA	NA	NA	rs7488163	0.83	0.83	0.834	0.879193	0.8429	1	0.902	0.7519	0.9479	0.82	0.97	0.86	0.68	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.121763	NA	NA	NA	NA	NA	NA	NA	3.1571
1336	12	55771126	55771126	A	T	intergenic	OR6C75,OR6C65	dist=11293;dist=23187	NA	NA	ncRNA_exonic	ENSG00000203408	NA	NA	NA	NA	NA	12q13.2	NA	NA	NA	NA	rs7488164	0.84	0.84	0.834	0.879193	0.8429	1	0.902	0.7519	0.9479	0.82	0.97	0.86	0.69	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.283041	1.283041	NA	NA	NA	NA	NA	NA	3.1571
1336	5	1416142	1416142	C	A	intronic	SLC6A3	NA	NA	NA	intronic	ENSG00000142319	NA	NA	NA	NA	NA	5p15.33	NA	NA	NA	NA	rs40358	0.75	0.75	0.742	0.748203	0.8429	0.6091	0.7853	0.6838	0.8548	0.84	0.63	0.78	0.72	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.026145	NA	NA	NA	NA	NA	0.804	NA	3.1571
1336	11	117059347	117059347	C	T	intronic	SIDT2	NA	NA	NA	intronic	ENSG00000149577	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs90192	0.7	0.7	0.697	0.664537	0.8429	0.4583	0.7579	0.7383	0.5276	0.84	0.47	0.78	0.72	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.772262	NA	NA	NA	NA	NA	0.725	NA	3.1571
1336	16	27666204	27666204	A	G	intronic	KIAA0556	NA	NA	NA	intronic	ENSG00000047578	NA	NA	NA	NA	NA	16p12.1	NA	NA	NA	NA	rs233470	0.79	0.79	0.79	0.795727	0.8429	0.9117	0.7925	0.5779	0.9243	0.84	0.91	0.8	0.59	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.171803	NA	NA	NA	NA	NA	0.804	NA	3.1571
1336	7	73469169	73469169	C	T	intronic	ELN	NA	NA	NA	intronic	ENSG00000049540	NA	NA	NA	NA	NA	7q11.23	NA	NA	NA	NA	rs2239691	0.25	0.25	0.25	0.216254	0.4235	0.1181	0.2421	0.1036	0.2382	0.4	0.15	0.29	0.11	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.790465	NA	NA	0.419862	0.139451	NA	0.225	NA	3.156638
1336	3	108195406	108195406	C	T	intronic	MYH15	NA	NA	NA	intronic	ENSG00000144821	NA	NA	NA	NA	NA	3q13.13	NA	NA	NA	NA	rs3996003	0.18	0.18	0.171	0.168131	0.3191	0.0109	0.1974	0.1225	0.2157	0.33	NA	0.24	0.13	0.2381	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.718937	NA	NA	0.28627	0.141161	NA	0.159	NA	3.15653
1336	11	1213000	1213000	T	A	intergenic	MUC2,MUC5B	dist=108583;dist=31295	NA	NA	intergenic	ENSG00000215182,ENSG00000117983	dist=50639;dist=31296	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs75897537	NA	NA	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.1772	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.186901	NA	NA	NA	NA	NA	NA	NA	3.1561334
1336	16	27629661	27629661	G	C	intronic	KIAA0556	NA	NA	NA	intronic	ENSG00000047578	NA	NA	NA	NA	NA	16p12.1	NA	NA	NA	NA	rs4787980	0.88	0.88	0.88	0.885982	0.8439	0.999	0.7997	0.8222	0.9601	0.84	1	0.82	0.84	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.287093	NA	NA	NA	NA	NA	0.92	NA	3.1561
1336	8	38959498	38959498	G	A	intronic	ADAM9	NA	NA	NA	intronic	ENSG00000168615	NA	NA	NA	NA	NA	8p11.22	NA	NA	NA	NA	rs4733905	0.23	0.23	0.22	0.226438	0.2883	0.2024	0.2608	0.1067	0.3252	0.3	0.23	0.27	0.1	0.2678	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.311115	NA	NA	0.288023	0.136178	ID=COSN168313;OCCURENCE=1(lung),1(large_intestine)	0.261	NA	3.155877
1336	13	99127496	99127496	C	T	intronic	STK24	NA	NA	NA	intronic	ENSG00000102572	NA	NA	NA	NA	NA	13q32.2	NA	NA	NA	NA	rs2274055	0.25	0.25	0.263	0.250998	0.2952	0.1389	0.2161	0.3525	0.2086	0.3	0.12	0.22	0.34	0.2619	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.662393	NA	NA	0.287093	0.337721	NA	0.188	NA	3.155807
1336	17	7705344	7705344	G	C	intronic	DNAH2	NA	NA	NA	intronic	ENSG00000183914	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs8073196	0.16	0.16	0.134	0.122604	0.3131	0.001	0.2003	0.0348	0.1155	0.32	0.0017	0.26	0.04	0.2235	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.976675	NA	NA	0.307674	0.081253	NA	0.174	NA	3.155726
1336	15	101589765	101589765	T	G	intronic	LRRK1	NA	NA	NA	intronic	ENSG00000154237	NA	NA	NA	NA	NA	15q26.3	NA	NA	NA	NA	rs897484	0.83	0.83	0.79	0.828474	0.8449	0.9623	0.902	0.6263	0.8947	0.85	0.96	0.89	0.59	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.37734	NA	NA	NA	NA	NA	0.812	NA	3.1551
1337	19	49340858	49340858	C	T	intronic	PLEKHA4	NA	NA	NA	intronic	ENSG00000105559	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs10407029	0.36	0.36	0.351	0.405152	0.2783	0.1131	0.3112	0.7912	0.3814	0.27	0.14	0.35	0.75	0.3087	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.406704	NA	NA	0.258504	0.702321	NA	0.457	NA	3.154496
1337	19	13220703	13220703	C	G	intronic	TRMT1	NA	NA	NA	intronic	ENSG00000104907	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs35601737	0.16	0.16	0.132	0.117812	0.3121	0.002	0.183	0.059	0.0706	0.3	0.0017	0.23	0.07	0.2251	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.206546	NA	NA	0.308605	0.105992	NA	0.297	NA	3.154195
1337	22	40415140	40415140	C	T	intronic	FAM83F	NA	NA	NA	intronic	ENSG00000133477	NA	NA	NA	NA	NA	22q13.1	NA	NA	NA	NA	rs2071771	0.23	0.23	0.235	0.272165	0.2863	0.0853	0.1556	0.3464	0.4325	0.3	0.08	0.16	0.35	0.2694	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.537249	NA	NA	0.290116	0.293917	NA	0.261	NA	3.154184
1337	1	226551529	226551529	C	G	intronic	PARP1	NA	NA	NA	intronic	ENSG00000143799	NA	NA	NA	NA	NA	1q42.12	NA	NA	NA	NA	rs752307	0.74	0.74	0.772	0.782348	0.8459	0.5645	0.6441	0.8858	0.8998	0.83	0.55	0.67	0.86	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.070929	NA	NA	NA	NA	NA	0.783	NA	3.1541
1337	1	226566726	226566726	A	C	intronic	PARP1	NA	NA	NA	intronic	ENSG00000143799	NA	NA	NA	NA	NA	1q42.12	NA	NA	NA	NA	rs907190	0.71	0.71	0.725	0.741214	0.8459	0.5179	0.6427	0.8328	0.8098	0.83	0.48	0.67	0.81	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.24066	NA	NA	NA	NA	NA	0.775	NA	3.1541
1337	2	168572098	168572098	A	G	intergenic	XIRP2,B3GALT1	dist=455837;dist=103084	NA	NA	ncRNA_exonic	ENSG00000214211	NA	NA	NA	NA	NA	2q24.3	NA	NA	NA	NA	rs10192010	0.77	0.77	0.732	0.770966	0.8459	0.8294	0.9092	0.5023	0.8988	0.86	0.8	0.89	0.53	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.189575	NA	NA	NA	NA	NA	0.551	NA	3.1541
1337	17	16745114	16745114	T	A	intergenic	KRT16P2,TNFRSF13B	dist=8967;dist=97284	NA	NA	ncRNA_exonic	ENSG00000131885	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs2656382	0.91	0.91	0.893	0.923323	0.8459	1	0.9078	0.8994	0.9673	0.85	0.99	0.91	0.92	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.220332	NA	NA	NA	NA	NA	NA	NA	3.1541
1337	18	53252388	53252388	G	A	intronic	TCF4	NA	NA	NA	intronic	ENSG00000196628	NA	NA	NA	NA	NA	18q21.2	NA	NA	NA	NA	rs599550	0.93	0.93	0.931	0.93151	0.8459	0.996	0.9452	0.9939	0.8589	0.84	1	0.93	0.99	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.900047	NA	NA	NA	NA	NA	0.841	NA	3.1541
1337	3	184075958	184075958	C	T	intronic	CLCN2	NA	NA	NA	intronic	ENSG00000114859,ENSG00000145191	NA	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs41266271	0.15	0.15	0.131	0.152955	0.3052	0.0476	0.1916	0.0227	0.2536	0.29	0.02	0.24	0.03	0.2329	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.211544	NA	NA	0.307907	0.063777	NA	0.297	NA	3.153993
1337	11	118919206	118919206	T	C	exonic	HYOU1	NA	synonymous SNV	HYOU1:NM_001130991:exon19:c.A2235G:p.A745A,HYOU1:NM_006389:exon19:c.A2235G:p.A745A	exonic	ENSG00000149428	NA	synonymous SNV	ENSG00000149428:ENST00000529972:exon18:c.A2049G:p.A683A,ENSG00000149428:ENST00000404233:exon19:c.A2235G:p.A745A,ENSG00000149428:ENST00000525859:exon19:c.A2049G:p.A683A	NA	NA	11q23.3	NA	NA	NA	NA	rs568922	0.79	0.79	0.784	0.803914	0.841	0.9454	0.6196	0.6694	0.9325	0.82	0.95	0.68	0.62	0.8172	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.906485	NA	NA	0.854598	0.6775	NA	0.812	NA	3.1538686
1337	21	43338933	43338933	A	T	intronic	C2CD2	NA	NA	NA	intronic	ENSG00000157617	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs12483229	0.24	0.24	0.217	0.227636	0.2883	0.1558	0.2248	0.2284	0.2403	0.28	0.16	0.25	0.26	0.2717	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.517839	NA	NA	0.286163	0.253972	NA	0.319	NA	3.153837
1337	20	47682893	47682893	C	T	intronic	CSE1L	NA	NA	NA	intronic	ENSG00000124207	NA	NA	NA	NA	NA	20q13.13	NA	NA	NA	NA	rs2246266	0.31	0.31	0.274	0.290935	0.2753	0.4802	0.3573	0.0764	0.3548	0.27	0.51	0.32	0.12	0.3017	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.113402	NA	NA	0.269186	0.12256	NA	0.37	NA	3.153814
1337	12	71519096	71519096	G	C	UTR3	TSPAN8	NM_004616:c.*18C>G	NA	NA	UTR3	ENSG00000127324	ENST00000393330:c.*18C>G,ENST00000247829:c.*18C>G,ENST00000546561:c.*18C>G,ENST00000552128:c.*18C>G	NA	NA	NA	NA	12q21.1	NA	NA	NA	NA	rs1051344	0.29	0.29	0.29	0.258786	0.4145	0.2887	0.2421	0.121	0.2658	0.41	0.31	0.28	0.11	0.3491	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.109351	NA	NA	0.416628	0.190422	NA	0.268	NA	3.1531054
1337	2	74900495	74900495	G	A	intronic	SEMA4F	NA	NA	NA	intronic	ENSG00000135622	NA	NA	NA	NA	NA	2p13.1	NA	NA	NA	NA	rs205648	0.53	0.53	0.5	0.510783	0.8469	0.1736	0.6844	0.2965	0.6789	0.85	0.17	0.73	0.31	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.960974	1.960974	NA	NA	NA	NA	0.63	NA	3.1531
1337	2	168572093	168572093	G	T	intergenic	XIRP2,B3GALT1	dist=455832;dist=103089	NA	NA	ncRNA_exonic	ENSG00000214211	NA	NA	NA	NA	NA	2q24.3	NA	NA	NA	NA	rs10168562	0.78	0.78	0.745	0.783746	0.8469	0.8135	0.9121	0.5613	0.8978	0.86	0.78	0.89	0.59	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.512726	NA	NA	NA	NA	NA	0.587	NA	3.1531
1337	3	53220569	53220569	G	A	intronic	PRKCD	NA	NA	NA	intronic	ENSG00000163932	NA	NA	NA	NA	NA	3p21.1	NA	NA	NA	NA	rs45596236	0.29	0.29	0.279	0.282348	0.2873	0.2202	0.2925	0.3411	0.2546	0.3	0.22	0.3	0.35	0.2759	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.552605	NA	NA	0.283837	0.32138	NA	0.232	NA	3.152963
1337	6	5000779	5000779	G	A	intronic	RPP40	NA	NA	NA	intronic	ENSG00000124787	NA	NA	NA	NA	NA	6p25.1	NA	NA	NA	NA	rs7744457	0.32	0.32	0.305	0.353235	0.2823	0.1687	0.3242	0.556	0.363	0.27	0.16	0.34	0.57	0.3007	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.586505	NA	NA	0.264131	0.495007	NA	0.399	NA	3.152869
1337	17	80367206	80367206	G	A	intronic	OGFOD3	NA	NA	NA	intronic	ENSG00000181396	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs62080965	0.14	0.14	0.129	0.134984	0.2972	0.005	0.1499	0.031	0.2321	0.3	0.0035	0.17	0.04	0.2368	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.079709	NA	NA	0.313372	0.073536	NA	0.094	NA	3.152628
1337	1	53558270	53558270	A	G	exonic	SLC1A7	NA	synonymous SNV	SLC1A7:NM_006671:exon7:c.T987C:p.R329R	exonic	ENSG00000162383	NA	synonymous SNV	ENSG00000162383:ENST00000371494:exon7:c.T987C:p.R329R	NA	NA	1p32.3	NA	NA	NA	NA	rs1288406	0.86	0.86	0.841	0.846046	0.835	0.9544	0.9207	0.7383	0.8384	0.84	0.95	0.91	0.76	0.8389	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.979878	NA	NA	0.840233	0.761462	NA	0.804	NA	3.1525336
1337	19	53302899	53302899	G	C	UTR3	ZNF28	NM_006969:c.*42C>G	NA	NA	UTR3	ENSG00000198538	ENST00000457749:c.*42C>G,ENST00000438150:c.*42C>G,ENST00000360272:c.*42C>G,ENST00000414252:c.*42C>G	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs9917046	0.69	0.69	0.757	0.682109	0.7107	0.6558	0.6182	0.7156	0.68	0.7	0.73	0.65	0.67	0.4701	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.494116	NA	NA	NA	NA	NA	0.116	NA	3.1525334
1337	2	70906115	70906115	C	A	intronic	ADD2	NA	NA	NA	intronic	ENSG00000075340	NA	NA	NA	NA	NA	2p13.3	NA	NA	NA	NA	rs2074815	0.36	0.36	0.343	0.352436	0.2724	0.379	0.268	0.4652	0.3149	0.28	0.35	0.32	0.52	0.2987	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.018538	NA	NA	0.276395	0.444394	NA	0.37	NA	3.152505
1337	3	108117694	108117694	G	A	intronic	MYH15	NA	NA	NA	intronic	ENSG00000144821	NA	NA	NA	NA	NA	3q13.13	NA	NA	NA	NA	rs13087507	0.2	0.2	0.196	0.200679	0.3111	0.0119	0.1931	0.2292	0.2485	0.32	0.0035	0.23	0.22	0.2482	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.157544	NA	NA	0.288462	0.225485	NA	0.203	NA	3.152238
1337	12	51737520	51737520	G	T	intronic	CELA1	NA	NA	NA	intronic	ENSG00000139610	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs17860301	0.15	0.15	0.131	0.14377	0.2873	0.0417	0.1772	0.0809	0.1626	0.26	0.03	0.19	0.09	0.2524	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.111746	NA	NA	0.30814	0.116659	NA	0.254	NA	3.15216
1337	2	109292280	109292280	T	C	intronic	LIMS1	NA	NA	NA	intronic	ENSG00000169756	NA	NA	NA	NA	NA	2q12.3	NA	NA	NA	NA	rs7584953	0.86	0.86	0.828	0.866014	0.8479	0.9871	0.9236	0.7012	0.9417	0.85	0.98	0.91	0.68	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.566382	NA	NA	NA	NA	NA	0.616	NA	3.1521
1337	16	148352	148352	G	A	intronic	NPRL3	NA	NA	NA	intronic	ENSG00000103148	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs2541616	0.8	0.8	0.786	0.81849	0.8479	0.6746	0.8559	0.8502	0.8671	0.85	0.65	0.85	0.88	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.788807	NA	NA	NA	NA	NA	0.797	NA	3.1521
1337	21	34929422	34929422	T	C	intronic	SON	NA	NA	NA	intronic	ENSG00000159140	NA	NA	NA	NA	NA	21q22.11	NA	NA	NA	NA	rs2070389	0.21	0.21	0.187	0.192292	0.3091	0.1657	0.2507	0.0741	0.2178	0.3	0.15	0.28	0.08	0.2576	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.875244	NA	NA	0.281228	0.105084	NA	0.094	NA	3.152072
1337	14	68046602	68046602	C	T	intronic	PLEKHH1	NA	NA	NA	intronic	ENSG00000054690	NA	NA	NA	NA	NA	14q24.1	NA	NA	NA	NA	rs6573782	0.22	0.22	0.191	0.211062	0.2813	0.246	0.1974	0.093	0.272	0.29	0.25	0.19	0.09	0.2907	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.952959	4.952959	NA	0.276003	0.118	NA	0.181	NA	3.151997
1337	6	110106234	110106234	A	G	intronic	FIG4	NA	NA	NA	intronic	ENSG00000112367	NA	NA	NA	Score=553;Name=lod=235	NA	6q21	NA	NA	NA	NA	rs10499054	0.43	0.43	0.4	0.358826	0.6531	0.3214	0.4928	0.1195	0.3231	0.65	0.33	0.55	0.11	0.5265	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.719599	1.719599	NA	0.668916	0.212438	NA	0.42	NA	3.151484
1337	13	23701560	23701560	T	C	intergenic	BASP1P1,SGCG	dist=229240;dist=53500	NA	NA	intergenic	ENSG00000223116,ENSG00000233440	dist=149424;dist=6753	NA	NA	NA	NA	13q12.12	NA	NA	NA	NA	rs113190865	0.12	0.12	0.09	0.107029	0.1819	0.0536	0.1124	0.0998	0.091	0.18	0.05	0.15	0.11	NA	0.18	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.440452	NA	NA	NA	NA	NA	0.196	NA	3.1514334
1337	1	67648460	67648460	T	C	intronic	IL23R	NA	NA	NA	intronic	ENSG00000162594,ENSG00000203963	NA	NA	NA	NA	NA	1p31.3	NA	NA	NA	NA	rs6687620	0.93	0.93	0.927	0.952077	0.8489	0.996	0.928	0.9955	0.9714	0.84	0.99	0.92	0.99	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.67383	NA	NA	NA	NA	NA	0.935	NA	3.1511
1337	2	98846405	98846405	A	T	intronic	VWA3B	NA	NA	NA	intronic	ENSG00000168658	NA	NA	NA	NA	NA	2q11.2	NA	NA	NA	NA	rs12712252	0.91	0.91	0.912	0.928115	0.8489	0.9782	0.8934	0.9508	0.9519	0.85	0.97	0.9	0.94	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.574402	2.574402	NA	NA	NA	NA	0.913	NA	3.1511
1337	15	99500256	99500256	G	A	intronic	IGF1R	NA	NA	NA	ncRNA_intronic	ENSG00000259475	NA	NA	NA	NA	NA	15q26.3	NA	NA	NA	NA	rs2593053	0.29	0.29	0.293	0.287939	0.4185	0.2609	0.2752	0.1248	0.411	0.4	0.26	0.31	0.15	0.3552	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.12584	NA	NA	0.409123	0.160674	NA	0.246	NA	3.1505103
1337	2	74344119	74344119	C	G	intergenic	TET3,BOLA3	dist=8817;dist=18409	NA	NA	intergenic	ENSG00000187605,ENSG00000257800	dist=8816;dist=3688	NA	NA	NA	NA	2p13.1	NA	NA	NA	NA	rs72911122	0.3	0.3	0.299	0.307508	0.1829	0.3671	0.3934	0.3306	0.2822	0.18	0.4	0.36	0.33	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.457676	1.457676	NA	NA	NA	NA	0.319	NA	3.1504334
1337	17	21207916	21207916	A	G	intronic	MAP2K3	NA	NA	NA	intronic	ENSG00000034152	NA	NA	NA	NA	NA	17p11.2	NA	Name=ZNF274	NA	NA	rs7209761	NA	NA	0.776	0.64976	0.5318	0.5754	0.487	0.8298	0.7198	NA	NA	NA	NA	0.6664	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.179406	NA	NA	0.651395	0.823423	NA	0.783	NA	3.150405
1337	12	131569234	131569234	G	A	intronic	GPR133	NA	NA	NA	intronic	ENSG00000111452	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs2293656	0.26	0.26	0.258	0.232628	0.2922	0.1002	0.232	0.3767	0.1135	0.27	0.12	0.26	0.4	0.2616	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.220565	NA	NA	0.296163	0.343395	NA	0.435	NA	3.150037
1337	20	55025762	55025762	G	A	intronic	CASS4	NA	NA	NA	intronic	ENSG00000087589	NA	NA	NA	NA	NA	20q13.31	NA	NA	NA	NA	rs6069753	0.46	0.46	0.484	0.464457	0.2555	0.5069	0.4121	0.8056	0.2117	0.24	0.54	0.36	0.78	0.3331	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.498957	NA	NA	0.261395	0.727417	NA	0.406	NA	3.150005
1337	9	82267732	82267732	C	G	intronic	TLE4	NA	NA	NA	intronic	ENSG00000106829	NA	NA	NA	NA	NA	9q21.31	NA	NA	Name=33	NA	rs2297499	0.55	0.55	0.51	0.549521	0.6083	0.7401	0.6585	0.1679	0.7311	0.62	0.72	0.62	0.21	0.6198	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.64977	1.64977	NA	0.62211	0.289188	NA	0.507	NA	3.14979
1337	17	72844165	72844165	C	T	intronic	GRIN2C	NA	NA	NA	intronic	ENSG00000161509	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs3744193	0.29	0.29	0.289	0.273363	0.2932	0.379	0.1787	0.2345	0.2638	0.3	0.4	0.19	0.24	0.2759	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.363208	NA	NA	0.281628	0.264866	NA	0.246	NA	3.149272
1337	2	20440860	20440860	C	T	intergenic	SDC1,PUM2	dist=15666;dist=7593	NA	NA	upstream	ENSG00000235411	NA	NA	NA	NA	NA	2p24.1	NA	NA	NA	NA	rs7595266	0.28	0.28	0.287	0.267772	0.3509	0.2004	0.2925	0.2073	0.316	0.36	0.22	0.32	0.2	NA	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.282398	NA	NA	NA	NA	NA	0.239	NA	3.1491
1337	12	48386577	48386577	G	T	intronic	COL2A1	NA	NA	NA	intronic	ENSG00000139219	NA	NA	NA	NA	NA	12q13.11	NA	NA	NA	NA	rs1793915	0.68	0.68	0.655	0.674521	0.8509	0.5575	0.6354	0.5968	0.7464	0.85	0.57	0.65	0.57	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.278794	NA	NA	NA	NA	NA	0.746	NA	3.1491
1337	15	90293701	90293701	G	A	intronic	MESP1	NA	NA	NA	intronic	ENSG00000166823	NA	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs2305442	0.19	0.19	0.203	0.194289	0.2644	0.12	0.183	0.1241	0.3016	0.27	0.13	0.19	0.11	0.3319	0.27	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.37995	NA	NA	0.254683	0.123626	NA	0.043	NA	3.149017
1337	10	121564859	121564859	A	G	intronic	INPP5F	NA	NA	NA	intronic	ENSG00000198825	NA	NA	NA	NA	NA	10q26.11	NA	NA	NA	NA	rs2273748	0.32	0.32	0.316	0.273363	0.2555	0.5466	0.3314	0.1142	0.184	0.26	0.56	0.31	0.13	0.3119	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.105428	NA	NA	0.284035	0.138448	ID=COSN163777;OCCURENCE=1(breast)	0.21	NA	3.148565
1337	3	20219885	20219885	C	T	ncRNA_intronic	SGOL1-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000237485	NA	NA	NA	NA	NA	3p24.3	NA	NA	NA	NA	rs6550402	0.7	0.7	0.688	0.70008	0.4861	0.9444	0.7046	0.6785	0.6943	0.48	0.97	0.67	0.72	0.5733	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.977325	NA	NA	0.459003	0.641398	NA	0.616	NA	3.1482636
1337	2	97020170	97020170	A	C	intronic	NCAPH	NA	NA	NA	intronic	ENSG00000121152	NA	NA	NA	NA	NA	2q11.2	NA	NA	NA	NA	rs3731936	0.2	0.2	0.199	0.278954	0.2763	0.2232	0.2334	0.0408	0.6933	0.27	0.2	0.24	0.05	0.2917	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.815558	NA	NA	0.283768	0.077848	NA	0.152	NA	3.148232
1337	3	10241987	10241987	A	C	intronic	IRAK2	NA	NA	NA	intronic	ENSG00000134070	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs263410	0.68	0.68	0.647	0.650958	0.8519	0.3542	0.7781	0.6747	0.6278	0.85	0.4	0.79	0.66	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.3308	NA	NA	NA	NA	NA	0.739	NA	3.1481
1337	7	20430960	20430960	T	C	intronic	ITGB8	NA	NA	NA	intronic	ENSG00000105855	NA	NA	NA	NA	NA	7p21.1	NA	NA	NA	NA	rs3779506	0.78	0.78	0.776	0.794728	0.8519	0.6032	0.8444	0.8192	0.865	0.84	0.61	0.85	0.83	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.188003	NA	NA	NA	NA	NA	0.87	NA	3.1481
1337	16	75269267	75269267	A	G	exonic	BCAR1	NA	synonymous SNV	BCAR1:NM_001170721:exon4:c.T900C:p.A300A,BCAR1:NM_001170715:exon5:c.T1584C:p.A528A,BCAR1:NM_001170716:exon5:c.T1584C:p.A528A,BCAR1:NM_001170717:exon5:c.T1584C:p.A528A,BCAR1:NM_001170718:exon5:c.T1530C:p.A510A,BCAR1:NM_001170719:exon5:c.T1524C:p.A508A,BCAR1:NM_014567:exon5:c.T1530C:p.A510A,BCAR1:NM_001170714:exon6:c.T1668C:p.A556A,BCAR1:NM_001170720:exon6:c.T1086C:p.A362A	exonic	ENSG00000050820	NA	synonymous SNV	ENSG00000050820:ENST00000162330:exon5:c.T1530C:p.A510A,ENSG00000050820:ENST00000393420:exon5:c.T1584C:p.A528A,ENSG00000050820:ENST00000393422:exon5:c.T1584C:p.A528A,ENSG00000050820:ENST00000420641:exon5:c.T1584C:p.A528A,ENSG00000050820:ENST00000538440:exon5:c.T1530C:p.A510A,ENSG00000050820:ENST00000542031:exon5:c.T1524C:p.A508A,ENSG00000050820:ENST00000546196:exon5:c.T1443C:p.A481A,ENSG00000050820:ENST00000418647:exon6:c.T1668C:p.A556A,ENSG00000050820:ENST00000535626:exon6:c.T1086C:p.A362A	NA	NA	16q23.1	NA	NA	NA	NA	rs3169330	0.91	0.91	0.897	0.926318	0.83	0.996	0.915	0.9455	0.9356	0.82	0.99	0.91	0.96	0.8735	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.330494	NA	NA	0.815192	0.904664	NA	0.79	NA	3.1479746
1337	17	48539763	48539763	C	A	intronic	ACSF2	NA	NA	NA	intronic	ENSG00000167107	NA	NA	NA	NA	NA	17q21.33	NA	NA	NA	NA	rs2277631	0.22	0.22	0.18	0.183307	0.2952	0.1369	0.245	0.0862	0.2035	0.28	0.14	0.3	0.13	0.2547	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.618659	1.618659	NA	0.302558	0.128007	NA	0.116	NA	3.147542
1337	16	10775822	10775822	G	T	intronic	TEKT5	NA	NA	NA	intronic	ENSG00000153060	NA	NA	NA	NA	NA	16p13.13	NA	NA	NA	NA	rs10221070	0.3	0.3	0.309	0.323482	0.2614	0.251	0.2205	0.475	0.3303	0.27	0.28	0.2	0.43	0.297	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.126394	NA	NA	0.29407	0.443787	NA	0.377	NA	3.14753
1337	14	77889040	77889040	T	C	intronic	NOXRED1	NA	NA	NA	intronic	ENSG00000165555	NA	NA	NA	NA	NA	14q24.3	NA	NA	NA	NA	rs8017215	0.25	0.25	0.252	0.25	0.3042	0.0506	0.1873	0.4191	0.2157	0.32	0.04	0.22	0.4	0.263	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.760075	1.760075	NA	0.285349	0.402633	NA	0.319	NA	3.147451
1337	2	107446396	107446396	T	C	intronic	ST6GAL2	NA	NA	NA	intronic	ENSG00000144057	NA	NA	NA	NA	NA	2q12.2	NA	NA	NA	NA	rs877693	0.86	0.86	0.869	0.846645	0.8529	0.9196	0.9035	0.7564	0.8466	0.86	0.93	0.89	0.74	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.640038	NA	NA	NA	NA	NA	0.884	NA	3.1471
1337	15	33925364	33925364	G	A	intronic	RYR3	NA	NA	NA	intronic	ENSG00000198838	NA	NA	NA	NA	NA	15q14	NA	NA	NA	NA	rs2291732	0.77	0.77	0.764	0.747005	0.8529	0.6647	0.8329	0.7428	0.6677	0.86	0.67	0.82	0.72	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.745822	NA	NA	NA	NA	NA	0.703	NA	3.1471
1337	19	53754736	53754736	T	C	intronic	ZNF677	NA	NA	NA	intronic	ENSG00000197928	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs2965240	0.5	0.5	0.492	0.513978	0.4334	0.752	0.4438	0.3926	0.5654	0.43	0.75	0.46	0.35	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.374645	NA	NA	0.419862	0.41474	NA	0.406	NA	3.146738
1337	7	4839163	4839163	A	C	intronic	RADIL	NA	NA	NA	intronic	ENSG00000157927	NA	NA	NA	NA	NA	7p22.1	NA	NA	NA	NA	rs3736241	0.35	0.35	0.392	0.422923	0.2793	0.1736	0.3314	0.7799	0.41	0.27	0.16	0.31	0.74	0.3214	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.091694	NA	NA	0.253085	0.646923	NA	0.413	NA	3.146215
1337	10	98311190	98311190	G	T	intronic	TM9SF3	NA	NA	NA	intronic	ENSG00000077147	NA	NA	NA	NA	NA	10q24.1	NA	NA	NA	NA	rs10882816	0.27	0.27	0.215	0.24381	0.2803	0.3294	0.245	0.1346	0.2648	0.29	0.35	0.27	0.15	0.2714	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.527747	NA	NA	0.302117	0.150318	NA	0.181	NA	3.146183
1337	4	169183789	169183789	A	G	intronic	DDX60	NA	NA	NA	intronic	ENSG00000137628	NA	NA	NA	NA	NA	4q32.3	NA	NA	Name=3	NA	rs6552581	0.62	0.62	0.659	0.644169	0.6322	0.379	0.5548	0.9743	0.547	0.61	0.37	0.57	0.98	0.6062	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.152464	NA	NA	0.615465	0.914169	ID=COSN167369;OCCURENCE=1(large_intestine)	0.616	NA	3.146135
1337	9	132963115	132963115	T	G	intronic	NCS1	NA	NA	NA	intronic	ENSG00000107130	NA	NA	NA	NA	NA	9q34.11	NA	NA	NA	NA	rs887534	0.88	0.88	0.86	0.872804	0.8539	0.9573	0.817	0.8661	0.8538	0.88	0.94	0.82	0.84	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.670137	NA	NA	NA	NA	NA	0.877	NA	3.1461
1337	17	72832032	72832032	C	G	intronic	TMEM104	NA	NA	NA	intronic	ENSG00000109066	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs72851753	0.29	0.29	0.281	0.263978	0.2952	0.379	0.1772	0.1891	0.2761	0.3	0.4	0.18	0.22	0.2765	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.427649	NA	NA	0.282442	0.213345	NA	0.232	NA	3.145858
1337	17	10250972	10250972	G	T	intronic	MYH13	NA	NA	NA	intronic	ENSG00000006788	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs12602139	0.92	0.92	0.911	0.91234	0.8549	0.9673	0.8876	0.9728	0.8507	0.86	0.97	0.89	0.97	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.261715	NA	NA	NA	NA	NA	0.848	NA	3.1451
1338	10	101474499	101474499	T	C	intronic	COX15	NA	NA	NA	intronic	ENSG00000014919	NA	NA	NA	NA	NA	10q24.2	NA	NA	NA	NA	rs11190255	0.26	0.26	0.246	0.233427	0.3022	0.2956	0.2147	0.1853	0.1769	0.31	0.28	0.22	0.2	0.2572	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.048324	3.048324	NA	0.295698	0.1936	NA	0.21	NA	3.144902
1338	3	135768232	135768232	T	A	intronic	PPP2R3A	NA	NA	NA	intronic	ENSG00000073711	NA	NA	NA	NA	NA	3q22.3	NA	NA	NA	NA	rs67039922	0.15	0.15	0.137	0.160543	0.2783	0.0278	0.1412	0.1051	0.2648	0.27	0.02	0.16	0.1	0.2628	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.859963	1.859963	NA	0.314186	0.142987	NA	0.181	NA	3.144714
1338	1	109428249	109428249	G	A	intronic	GPSM2	NA	NA	NA	intronic	ENSG00000121957,ENSG00000162641	NA	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	rs10857987	0.28	0.28	0.294	0.298323	0.2942	0.0546	0.2118	0.5635	0.2566	0.3	0.05	0.25	0.55	0.2828	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.811359	NA	NA	0.278347	0.51793	NA	0.268	NA	3.144653
1338	19	55623806	55623806	C	T	intronic	PPP1R12C	NA	NA	NA	intronic	ENSG00000125503	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs604216	0.23	0.23	0.188	0.188299	0.2962	0.2748	0.3084	0.0356	0.1094	0.29	0.26	0.28	0.04	0.268	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.037775	NA	NA	0.291531	0.06267	NA	0.203	NA	3.144269
1338	17	16722068	16722068	A	C	intergenic	USP32P1,KRT16P2	dist=14249;dist=11729	NA	NA	ncRNA_intronic	ENSG00000226145	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs2688023	0.91	0.91	0.926	0.9377	0.8559	1	0.9207	0.9455	0.9591	0.86	0.99	0.92	0.89	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.133809	NA	NA	NA	NA	NA	0.833	NA	3.1441
1338	17	16723212	16723212	C	T	intergenic	USP32P1,KRT16P2	dist=15393;dist=10585	NA	NA	ncRNA_intronic	ENSG00000226145	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs2688022	0.91	0.91	0.947	0.941294	0.8559	1	0.9179	0.9599	0.9601	0.86	0.99	0.92	0.9	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.397422	NA	NA	NA	NA	NA	0.87	NA	3.1441
1338	22	19870831	19870831	C	T	intronic	TXNRD2	NA	NA	NA	intronic	ENSG00000184470	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs2239893	0.25	0.25	0.226	0.221645	0.2903	0.2758	0.2435	0.1233	0.2127	0.29	0.31	0.25	0.11	0.2694	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.508203	NA	NA	0.296209	0.158158	NA	0.21	NA	3.144091
1338	2	241708675	241708675	C	T	intronic	KIF1A	NA	NA	NA	intronic	ENSG00000130294	NA	NA	NA	NA	NA	2q37.3	NA	NA	NA	NA	rs2288753	0.34	0.34	0.359	0.335264	0.2833	0.5714	0.268	0.2648	0.2883	0.28	0.56	0.22	0.24	0.309	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.699655	NA	NA	0.263616	0.233478	NA	0.391	NA	3.144084
1338	22	32266546	32266546	A	T	intronic	DEPDC5	NA	NA	NA	intronic	ENSG00000100150	NA	NA	NA	NA	NA	22q12.3	NA	NA	NA	NA	rs5994441	0.32	0.32	0.318	0.35024	0.2873	0.1627	0.317	0.5598	0.3487	0.28	0.15	0.31	0.58	0.305	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.220368	NA	NA	0.263838	0.495182	NA	0.377	NA	3.143862
1338	11	61179285	61179285	G	A	exonic	CPSF7	NA	synonymous SNV	CPSF7:NM_001136040:exon8:c.C1209T:p.I403I,CPSF7:NM_001142565:exon8:c.C1182T:p.I394I,CPSF7:NM_024811:exon8:c.C1338T:p.I446I	exonic	ENSG00000149532	NA	synonymous SNV	ENSG00000149532:ENST00000448745:exon7:c.C1182T:p.I394I,ENSG00000149532:ENST00000340437:exon8:c.C1338T:p.I446I,ENSG00000149532:ENST00000394888:exon8:c.C1209T:p.I403I,ENSG00000149532:ENST00000439958:exon8:c.C1182T:p.I394I,ENSG00000149532:ENST00000477890:exon9:c.C981T:p.I327I	NA	NA	11q12.2	NA	NA	NA	NA	rs3019198	0.76	0.76	0.723	0.719649	0.8549	0.9712	0.8386	0.295	0.8108	0.86	0.97	0.84	0.29	0.8189	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.333822	1.333822	NA	0.849384	0.373751	NA	0.659	NA	3.1434826
1338	20	47585642	47585642	T	C	intronic	ARFGEF2	NA	NA	NA	intronic	ENSG00000124198	NA	NA	NA	NA	NA	20q13.13	NA	NA	NA	NA	rs3764683	0.37	0.37	0.315	0.371406	0.2753	0.4812	0.3948	0.357	0.3599	0.27	0.52	0.37	0.36	0.322	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.632945	NA	NA	0.259302	0.369042	NA	0.493	NA	3.143398
1338	2	79314081	79314081	T	C	intronic	REG1B	NA	NA	NA	intronic	ENSG00000172023	NA	NA	NA	NA	NA	2p12	NA	NA	NA	NA	rs6738657	0.22	0.22	0.221	0.203275	0.3072	0.0962	0.1599	0.2405	0.1871	0.31	0.11	0.2	0.22	0.2485	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.137678	NA	NA	0.30093	0.244439	NA	0.261	NA	3.14337
1338	21	15554030	15554030	T	C	intronic	LIPI	NA	NA	NA	intronic	ENSG00000188992	NA	NA	NA	NA	NA	21q11.2	NA	NA	NA	NA	rs2822438	0.26	0.26	0.251	0.241414	0.2942	0.1012	0.3401	0.3169	0.1595	0.3	0.11	0.35	0.31	0.2693	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.186771	NA	NA	0.293256	0.297911	NA	0.333	NA	3.143244
1338	4	55156400	55156400	A	G	intronic	PDGFRA	NA	NA	NA	intronic	ENSG00000134853,ENSG00000145216	NA	NA	NA	NA	NA	4q12	NA	NA	NA	NA	rs2276948	0.74	0.74	0.728	0.70028	0.8569	0.8274	0.7133	0.4372	0.7546	0.85	0.83	0.75	0.46	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.850923	NA	NA	NA	NA	NA	0.659	NA	3.1431
1338	22	27004089	27004089	A	C	intronic	CRYBB1	NA	NA	NA	intronic	ENSG00000100122	NA	NA	NA	NA	NA	22q12.1	NA	NA	NA	NA	rs5761626	0.92	0.92	0.911	0.921326	0.8569	0.994	0.8905	0.9259	0.9284	0.85	1	0.9	0.94	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.319852	NA	NA	NA	NA	NA	0.833	NA	3.1431
1338	15	34113592	34113592	T	G	intronic	RYR3	NA	NA	NA	intronic	ENSG00000198838	NA	NA	NA	NA	NA	15q14	NA	NA	NA	NA	rs2288615	0.23	0.23	0.2	0.200879	0.3032	0.2619	0.2291	0.0567	0.2076	0.32	0.25	0.24	0.06	0.2912	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.230801	NA	NA	0.262629	0.079465	NA	0.225	NA	3.142971
1338	1	54370306	54370306	G	A	intronic	DIO1	NA	NA	NA	intronic	ENSG00000211452	NA	NA	NA	NA	NA	1p32.3	NA	NA	NA	NA	rs2294512	0.4	0.4	0.385	0.416534	0.2545	0.627	0.2651	0.5038	0.3558	0.25	0.62	0.29	0.46	0.3378	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.619013	NA	NA	0.264841	0.471517	NA	0.348	NA	3.142859
1338	9	74845989	74845989	C	A	intronic	GDA	NA	NA	NA	intronic	ENSG00000119125	NA	NA	NA	NA	NA	9q21.13	NA	NA	NA	NA	rs10869150	0.31	0.31	0.289	0.308906	0.2773	0.5397	0.2781	0.1074	0.3978	0.28	0.56	0.24	0.11	0.3013	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.546174	NA	NA	0.278837	0.152973	NA	0.203	NA	3.142563
1338	4	100268131	100268131	C	T	intronic	ADH1C	NA	NA	NA	intronic	ENSG00000248144	NA	NA	NA	NA	NA	4q23	NA	NA	NA	NA	rs3762896	0.43	0.43	0.475	0.477436	0.2594	0.7639	0.1844	0.4818	0.6084	0.26	0.77	0.18	0.49	0.3325	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.120307	NA	NA	0.265581	0.440309	NA	0.435	NA	3.142519
1338	11	60201232	60201232	T	C	intronic	MS4A5	NA	NA	NA	intronic	ENSG00000166930	NA	NA	NA	NA	NA	11q12.2	NA	NA	NA	NA	rs3763845	0.2	0.2	0.172	0.18111	0.2903	0.1448	0.3285	0.0393	0.1933	0.29	0.15	0.27	0.06	0.2751	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.636144	NA	NA	0.292442	0.075806	NA	0.159	NA	3.142158
1338	3	49884913	49884913	C	T	intronic	TRAIP	NA	NA	NA	intronic	ENSG00000183763	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs13316065	0.21	0.21	0.204	0.204473	0.3042	0.1498	0.2003	0.1362	0.2536	0.3	0.17	0.19	0.13	0.2546	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.332492	NA	NA	0.29907	0.163414	NA	0.159	NA	3.14213
1338	5	5189950	5189950	G	A	intronic	ADAMTS16	NA	NA	NA	intronic	ENSG00000145536	NA	NA	NA	NA	NA	5p15.32	NA	NA	NA	NA	rs6859975	0.88	0.88	0.883	0.894369	0.8579	0.8026	0.9236	0.975	0.8967	0.85	0.83	0.89	0.98	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.56041	NA	NA	NA	NA	NA	0.978	NA	3.1421
1338	7	6875278	6875278	C	G	intergenic	CCZ1B,LOC100131257	dist=9352;dist=240123	NA	NA	intergenic	ENSG00000146574,ENSG00000155070	dist=8877;dist=19838	NA	NA	NA	NA	7p22.1	NA	NA	NA	NA	rs13234838	0.15	0.15	0.117	0.15595	0.1918	0.247	0.1455	0.025	0.2096	0.17	0.21	0.16	0.02	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.416286	NA	NA	NA	NA	NA	0.043	NA	3.1415334
1338	8	82627395	82627395	A	C	intronic	ZFAND1	NA	NA	NA	intronic	ENSG00000104231	NA	NA	NA	NA	NA	8q21.13	NA	NA	NA	NA	rs58900840	0.45	0.45	0.454	0.415935	0.2734	0.8065	0.3026	0.3616	0.3139	0.27	0.82	0.32	0.39	0.3299	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.081327	NA	NA	0.255408	0.347254	NA	0.326	NA	3.141292
1338	9	74846104	74846104	A	G	intronic	GDA	NA	NA	NA	intronic	ENSG00000119125	NA	NA	NA	NA	NA	9q21.13	NA	NA	NA	NA	rs17057536	0.31	0.31	0.284	0.309105	0.2783	0.5397	0.2781	0.1074	0.3978	0.28	0.56	0.24	0.11	0.3016	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.230278	NA	NA	0.278837	0.153427	NA	0.203	NA	3.141263
1338	11	6220376	6220376	G	C	upstream	OR52W1	NA	NA	NA	UTR5	ENSG00000175485	ENST00000311352:c.-78G>C	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs325610	0.81	0.81	0.795	0.765176	0.8588	0.9692	0.8012	0.4909	0.8037	0.85	0.98	0.83	0.52	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.345791	1.345791	NA	NA	NA	NA	0.797	NA	3.1412
1338	15	48539026	48539026	A	T	intronic	SLC12A1	NA	NA	NA	intronic	ENSG00000074803	NA	NA	NA	NA	NA	15q21.1	NA	NA	NA	NA	rs11636073	0.55	0.55	0.5	0.530351	0.8588	0.2242	0.7378	0.2769	0.7035	0.87	0.2	0.75	0.3	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.451876	NA	NA	NA	NA	NA	0.536	NA	3.1412
1338	2	136873549	136873549	A	T	UTR5	CXCR4	NM_001008540:c.-40T>A	NA	NA	UTR5	ENSG00000121966	ENST00000409817:c.-40T>A	NA	NA	NA	NA	2q22.1	NA	NA	NA	NA	rs2680880	0.19	0.19	0.103	0.169728	0.4175	0.002	0.245	0.0257	0.229	0.42	NA	0.25	0.03	0.3616	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.963051	NA	NA	0.413136	0.086225	NA	0.246	NA	3.1410974
1338	10	53814383	53814383	C	T	intronic	PRKG1	NA	NA	NA	intronic	ENSG00000185532	NA	NA	NA	NA	NA	10q21.1	NA	NA	NA	NA	rs12778630	0.35	0.35	0.351	0.333866	0.4155	0.2579	0.3271	0.2973	0.3824	0.41	0.27	0.38	0.32	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.277308	NA	NA	0.443432	0.330202	NA	0.312	NA	3.141068
1338	11	31327766	31327766	G	A	intronic	DCDC1	NA	NA	NA	ncRNA_intronic	ENSG00000255525	NA	NA	NA	NA	NA	11p13	NA	NA	NA	NA	rs2761592	0.35	0.35	0.334	0.347244	0.4225	0.0714	0.4395	0.4834	0.3047	0.43	0.08	0.45	0.47	0.3836	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.891398	3.891398	NA	0.386226	0.46594	ID=COSN163908;OCCURENCE=1(breast)	0.442	NA	3.1410073
1338	6	29274348	29274348	G	A	upstream	OR14J1	NA	NA	NA	upstream	ENSG00000204695	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs9257693	0.38	0.38	0.346	0.346246	0.5258	0.3323	0.4092	0.1702	0.3691	0.55	0.31	0.42	0.17	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.106247	NA	NA	NA	NA	NA	0.297	NA	3.1408666
1338	9	133355902	133355902	C	A	intronic	ASS1	NA	NA	NA	intronic	ENSG00000130707	NA	NA	NA	NA	NA	9q34.11	NA	NA	NA	NA	rs2043189	0.32	0.32	0.307	0.277556	0.4155	0.3889	0.3069	0.0749	0.274	0.42	0.38	0.34	0.08	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.153299	NA	NA	0.443746	0.116329	NA	0.254	NA	3.140754
1338	17	80053166	80053166	C	T	intronic	FASN	NA	NA	NA	intronic	ENSG00000169710	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs45555535	0.17	0.17	0.15	0.172923	0.2903	0.0744	0.1859	0.1324	0.1994	0.29	0.07	0.2	0.11	0.2503	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.561086	NA	NA	0.31906	0.159246	NA	0.145	NA	3.14034
1338	22	43619062	43619062	C	G	intronic	SCUBE1	NA	NA	NA	intronic	ENSG00000159307	NA	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs2071726	0.31	0.31	0.31	0.310903	0.3072	0.4177	0.17	0.2874	0.3364	0.33	0.38	0.19	0.27	0.2794	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.24648	NA	NA	0.27315	0.294278	NA	0.304	NA	3.14025
1338	2	107446430	107446430	T	C	intronic	ST6GAL2	NA	NA	NA	intronic	ENSG00000144057	NA	NA	NA	NA	NA	2q12.2	NA	NA	NA	NA	rs935565	0.91	0.91	0.919	0.907947	0.8598	0.9196	0.9222	0.972	0.8487	0.86	0.93	0.9	0.97	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.672472	NA	NA	NA	NA	NA	0.928	NA	3.1402
1338	17	48245180	48245180	C	T	intronic	SGCA	NA	NA	NA	intronic	ENSG00000108823	NA	NA	NA	NA	NA	17q21.33	NA	NA	NA	NA	rs2696297	0.87	0.87	0.873	0.867013	0.8598	0.9653	0.7911	0.8374	0.8671	0.86	0.96	0.81	0.83	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.274285	NA	NA	NA	NA	NA	0.819	NA	3.1402
1338	2	37406761	37406761	T	C	intronic	SULT6B1	NA	NA	NA	intronic	ENSG00000138068	NA	NA	NA	NA	NA	2p22.2	NA	NA	NA	NA	rs4459710	0.42	0.42	0.403	0.426118	0.2624	0.8006	0.4207	0.2322	0.4744	0.28	0.79	0.38	0.21	0.3474	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.225686	NA	NA	0.250581	0.248979	NA	0.442	NA	3.139619
1338	1	6188546	6188546	G	A	intronic	CHD5	NA	NA	NA	intronic	ENSG00000116254	NA	NA	NA	NA	NA	1p36.31	NA	NA	NA	NA	rs2273034	0.22	0.22	0.191	0.2502	0.2773	0.1875	0.3444	0.0817	0.4479	0.28	0.18	0.31	0.1	0.3017	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.787495	NA	NA	0.281395	0.111212	NA	0.29	NA	3.139605
1338	8	125107201	125107201	G	A	exonic	FER1L6	NA	synonymous SNV	FER1L6:NM_001039112:exon35:c.G4617A:p.P1539P	exonic	ENSG00000214814	NA	synonymous SNV	ENSG00000214814:ENST00000399018:exon34:c.G4617A:p.P1539P,ENSG00000214814:ENST00000522917:exon35:c.G4617A:p.P1539P	NA	NA	8q24.13	NA	NA	NA	NA	rs6470219	0.73	0.73	0.731	0.718051	0.8678	0.6419	0.683	0.6059	0.819	0.86	0.67	0.71	0.62	0.7988	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.188947	NA	NA	0.860499	0.646303	NA	0.797	NA	3.1395676
1338	12	3310439	3310439	C	T	intronic	TSPAN9	NA	NA	NA	intronic	ENSG00000011105	NA	NA	NA	NA	NA	12p13.32	NA	NA	Name=12	NA	rs740776	0.54	0.54	0.493	0.538938	0.6412	0.6786	0.5159	0.2678	0.6728	0.65	0.66	0.53	0.24	0.5847	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.54035	2.54035	NA	0.634651	0.312528	NA	0.391	NA	3.139449
1338	3	186938956	186938956	C	T	intronic	MASP1	NA	NA	NA	intronic	ENSG00000127241	NA	NA	NA	NA	NA	3q27.3	NA	NA	NA	NA	rs3733001	0.45	0.45	0.427	0.469848	0.2406	0.6895	0.4092	0.559	0.4018	0.23	0.71	0.37	0.54	0.3745	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.744881	NA	NA	0.245581	0.501135	NA	0.471	NA	3.139319
1338	11	9199650	9199650	C	T	intronic	DENND5A	NA	NA	NA	intronic	ENSG00000184014	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs60693427	0.24	0.24	0.276	0.252196	0.3002	0.0109	0.2075	0.4818	0.1728	0.3	0.01	0.23	0.44	0.2675	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.117241	2.117241	NA	0.293063	0.446388	NA	0.261	NA	3.139237
1338	15	62990916	62990916	G	A	intronic	TLN2	NA	NA	NA	intronic	ENSG00000171914	NA	NA	NA	NA	NA	15q22.2	NA	NA	NA	NA	rs12906130	0.37	0.37	0.345	0.340655	0.2565	0.6835	0.3516	0.1899	0.2699	0.27	0.65	0.34	0.22	0.3159	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.719517	NA	NA	0.288372	0.204721	NA	0.312	NA	3.139228
1338	17	7830610	7830610	G	A	intronic	KCNAB3	NA	NA	NA	intronic	ENSG00000170049,ENSG00000262730	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs9908139	0.53	0.53	0.5	0.547923	0.4254	0.8036	0.6225	0.3933	0.5665	0.44	0.75	0.56	0.4	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.100143	NA	NA	0.435511	0.411352	NA	0.457	NA	3.139089
1338	19	51455814	51455814	A	C	intronic	KLK5	NA	NA	NA	ncRNA_intronic	ENSG00000269495	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs2739412	0.51	0.51	0.472	0.514776	0.3539	0.7163	0.5	0.5242	0.4703	0.36	0.74	0.47	0.51	0.4574	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.572827	NA	NA	0.38314	0.498411	NA	0.514	NA	3.1388933
1338	15	66816183	66816183	C	G	intronic	ZWILCH	NA	NA	NA	intronic	ENSG00000174442,ENSG00000174444	NA	NA	NA	NA	NA	15q22.31	NA	NA	NA	NA	rs6494579	0.89	0.89	0.891	0.913339	0.8618	0.9335	0.8718	0.9478	0.9284	0.85	0.92	0.86	0.94	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.001175	NA	NA	NA	NA	NA	0.841	NA	3.1382
1338	1	59127193	59127193	C	T	intronic	MYSM1	NA	NA	NA	intronic	ENSG00000162601	NA	NA	NA	NA	NA	1p32.1	NA	NA	NA	NA	rs7525365	0.25	0.25	0.23	0.240016	0.2843	0.3095	0.2392	0.1059	0.3047	0.28	0.32	0.24	0.11	0.2828	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.91888	1.91888	NA	0.29517	0.146162	NA	0.225	NA	3.13773
1338	14	107078567	107078567	T	C	intergenic	LINC00221,NONE	dist=127038;dist=NONE	NA	NA	exonic	ENSG00000211968	NA	nonsynonymous SNV	ENSG00000211968:ENST00000390628:exon2:c.A157G:p.M53V	NA	NA	14q32.33	NA	NA	NA	NA	rs2516904	0.46	0.46	0.432	0.386981	0.5974	0.4673	0.5548	0.1445	0.2965	0.6	0.5	0.52	0.15	0.5112	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.094358	NA	0.19	0.5873	0.215637	NA	0.471	NA	3.1374334
1338	7	121943642	121943642	A	G	intronic	FEZF1	NA	NA	NA	intronic	ENSG00000128610	NA	NA	NA	NA	NA	7q31.32	NA	NA	NA	NA	rs111662975	0.22	0.22	0.162	0.192891	0.4125	0.001	0.1974	0.1664	0.1973	0.42	NA	0.22	0.18	0.0788	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.30871	NA	NA	0.371464	0.185694	NA	0.036	NA	3.137236
1338	8	74189562	74189562	T	C	intergenic	LOC100130301,RPL7	dist=17825;dist=13312	NA	NA	downstream	ENSG00000254213	NA	NA	NA	NA	NA	8q21.11	NA	NA	NA	NA	rs6983289	0.44	0.44	0.387	0.498403	0.3628	0.5258	0.4957	0.4841	0.6309	0.35	0.51	0.48	0.48	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.823914	NA	NA	NA	NA	NA	0.638	NA	3.1372
1338	19	51856619	51856619	T	C	intronic	ETFB	NA	NA	NA	intronic	ENSG00000105379,ENSG00000269403	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs2004309	0.75	0.75	0.745	0.776358	0.8628	0.5218	0.6398	0.9652	0.7914	0.84	0.51	0.68	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.748103	1.748103	NA	NA	NA	NA	0.42	NA	3.1372
1338	19	51856631	51856631	G	A	intronic	ETFB	NA	NA	NA	intronic	ENSG00000105379,ENSG00000269403	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs3889312	0.75	0.75	0.689	0.775359	0.8628	0.5188	0.6398	0.9652	0.7894	0.84	0.51	0.68	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.761475	NA	NA	NA	NA	NA	0.333	NA	3.1372
1338	17	61901641	61901641	T	C	intronic	FTSJ3	NA	NA	NA	intronic	ENSG00000108592	NA	NA	NA	NA	NA	17q23.3	NA	Name=ZNF263	NA	NA	rs894407	0.68	0.68	0.675	0.726438	0.5984	0.5556	0.6787	0.9569	0.7566	0.6	0.58	0.63	0.96	0.6581	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.217713	NA	NA	0.606512	0.894235	NA	0.674	NA	3.136988
1338	17	61901657	61901657	A	G	intronic	FTSJ3	NA	NA	NA	intronic	ENSG00000108592	NA	NA	NA	NA	NA	17q23.3	NA	Name=ZNF263	NA	NA	rs894406	0.68	0.68	0.672	0.726438	0.5984	0.5556	0.6787	0.9569	0.7566	0.6	0.58	0.63	0.96	0.6581	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.461649	NA	NA	0.606512	0.894235	NA	0.674	NA	3.136988
1338	9	32450187	32450187	T	C	UTR3	ACO1	NM_002197:c.*78T>C	NA	NA	UTR3	ENSG00000122729	ENST00000541043:c.*78T>C,ENST00000379923:c.*78T>C,ENST00000309951:c.*78T>C	NA	NA	NA	NA	9p21.1	NA	NA	NA	NA	rs12985	0.42	0.42	0.429	0.397963	0.3728	0.5188	0.3948	0.4297	0.2587	0.37	0.48	0.44	0.43	0.4238	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.060049	NA	NA	0.40005	0.417237	NA	0.399	NA	3.1366834
1338	15	99901749	99901749	C	G	intronic	LRRC28	NA	NA	NA	intronic	ENSG00000168904	NA	NA	NA	NA	NA	15q26.3	NA	NA	NA	NA	rs3817147	0.38	0.38	0.405	0.394569	0.2654	0.378	0.3228	0.5915	0.3292	0.26	0.4	0.33	0.58	0.3224	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.127982	NA	NA	0.275541	0.539144	NA	0.348	NA	3.136659
1338	17	7721231	7721231	T	C	intronic	DNAH2	NA	NA	NA	intronic	ENSG00000183914	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs9916791	0.34	0.34	0.315	0.355831	0.2724	0.5843	0.268	0.23	0.4387	0.26	0.56	0.27	0.24	0.3174	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.769077	NA	NA	0.273605	0.238084	NA	0.275	NA	3.136595
1338	4	69362527	69362527	G	C	UTR3	TMPRSS11E	NM_014058:c.*5G>C	NA	NA	UTR3	ENSG00000087128	ENST00000305363:c.*5G>C	NA	NA	NA	NA	4q13.2	NA	NA	NA	NA	rs2278920	0.27	0.27	0.25	0.226438	0.4394	0.119	0.3141	0.1256	0.1922	0.44	0.13	0.35	0.13	0.3344	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.476182	NA	NA	0.422952	0.174762	NA	0.232	NA	3.1365814
1338	12	132962982	132962982	C	T	intergenic	GALNT9,FBRSL1	dist=57077;dist=104175	NA	NA	intergenic	ENSG00000255916,ENSG00000256783	dist=54821;dist=70764	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs59141399	0.17	0.17	0.144	0.146565	0.1968	0.1518	0.2622	0.0348	0.1585	0.21	0.17	0.24	0.05	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.081774	NA	NA	NA	NA	NA	0.268	NA	3.1365334
1338	10	5919859	5919859	C	T	intronic	ANKRD16	NA	NA	NA	intronic	ENSG00000134461	NA	NA	NA	NA	NA	10p15.1	NA	NA	NA	NA	rs2985042	0.84	0.84	0.816	0.804113	0.8638	0.8482	0.9135	0.6853	0.7802	0.87	0.84	0.92	0.71	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.400867	NA	NA	NA	NA	NA	0.812	NA	3.1362
1338	10	5919947	5919947	C	T	intronic	ANKRD16	NA	NA	NA	intronic	ENSG00000134461	NA	NA	NA	NA	NA	10p15.1	NA	NA	NA	NA	rs2985043	0.84	0.84	0.812	0.803914	0.8638	0.8472	0.9135	0.6853	0.7802	0.87	0.84	0.92	0.71	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.51799	NA	NA	NA	NA	NA	0.79	NA	3.1362
1338	13	23898454	23898454	C	T	intronic	SGCG	NA	NA	NA	intronic	ENSG00000102683	NA	NA	NA	NA	NA	13q12.12	NA	NA	NA	NA	rs9510700	0.81	0.81	0.808	0.799121	0.8638	0.881	0.8775	0.5893	0.8763	0.86	0.87	0.89	0.61	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.561533	NA	NA	NA	NA	NA	0.819	NA	3.1362
1338	7	77227241	77227241	C	T	intronic	PTPN12	NA	NA	NA	intronic	ENSG00000127947	NA	NA	NA	NA	NA	7q11.23	NA	NA	NA	NA	rs6955503	0.24	0.24	0.232	0.250998	0.3072	0.1766	0.2406	0.2504	0.2781	0.3	0.19	0.2	0.24	0.2674	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.210661	NA	NA	0.289419	0.253064	NA	0.268	NA	3.135981
1338	17	31319033	31319033	G	C	intronic	SPACA3	NA	NA	NA	intronic	ENSG00000141316	NA	NA	NA	Score=243;Name=lod=13	NA	17q11.2	NA	NA	NA	NA	rs3922357	0.6	0.6	0.56	0.628794	0.5954	0.5179	0.6354	0.7118	0.6605	0.57	0.5	0.65	0.72	0.6343	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.472833	NA	NA	0.634651	0.703813	NA	0.754	NA	3.135649
1338	12	123339344	123339344	A	G	intronic	HIP1R	NA	NA	NA	intronic	ENSG00000130787	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs2292136	0.83	0.83	0.815	0.780551	0.8648	0.7639	0.9265	0.7118	0.7004	0.9	0.75	0.92	0.75	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.557838	NA	NA	NA	NA	NA	0.833	NA	3.1352
1339	11	34527152	34527152	A	G	intronic	ELF5	NA	NA	NA	intronic	ENSG00000135374	NA	NA	NA	NA	NA	11p13	NA	NA	NA	NA	rs2231821	0.16	0.16	0.143	0.154353	0.3091	0.0288	0.183	0.0287	0.274	0.32	0.03	0.2	0.03	0.2551	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.259322	NA	NA	0.300838	0.06426	NA	0.196	NA	3.134962
1339	6	29274356	29274356	T	A	upstream	OR14J1	NA	NA	NA	upstream	ENSG00000204695	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs7774255	0.39	0.39	0.362	0.361222	0.5318	0.3323	0.4135	0.208	0.3855	0.55	0.31	0.43	0.2	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2383	NA	NA	NA	NA	NA	0.355	NA	3.1348666
1339	10	61111975	61111975	G	C	intronic	FAM13C	NA	NA	NA	intronic	ENSG00000148541	NA	NA	NA	NA	NA	10q21.1	NA	NA	NA	NA	rs284606	0.79	0.79	0.779	0.763179	0.8658	0.6508	0.8127	0.8101	0.6748	0.86	0.66	0.82	0.8	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.412381	NA	NA	NA	NA	NA	0.812	NA	3.1342
1339	15	22933528	22933528	G	A	intronic	CYFIP1	NA	NA	NA	intronic	ENSG00000068793	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs2084063	0.25	0.25	0.221	0.21226	0.2783	0.2748	0.3473	0.09	0.1493	0.29	0.26	0.33	0.11	0.3071	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.605317	NA	NA	0.280581	0.110077	NA	0.087	NA	3.134019
1339	1	177930096	177930096	T	C	intronic	SEC16B	NA	NA	NA	intronic	ENSG00000120341,ENSG00000254154	NA	NA	NA	NA	NA	1q25.2	NA	NA	NA	NA	rs867275	0.26	0.26	0.244	0.266174	0.2744	0.3105	0.3444	0.1082	0.3701	0.27	0.31	0.34	0.13	0.3066	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.281954	1.281954	NA	0.285256	0.118932	NA	0.384	NA	3.133744
1339	7	100552867	100552867	T	C	intergenic	ACHE,MUC12	dist=59326;dist=60037	NA	NA	intronic	ENSG00000169894	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs73714266	NA	NA	NA	0.153554	0.0258	0.0149	0.0677	0.3699	0.1963	NA	NA	NA	NA	0.5075	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.255159	NA	NA	NA	NA	NA	0.522	NA	3.1333667
1339	15	42580106	42580106	A	C	intronic	GANC	NA	NA	NA	intronic	ENSG00000214013	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs8036596	0.73	0.73	0.721	0.645367	0.8668	0.8423	0.6282	0.3411	0.638	0.88	0.87	0.68	0.39	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.907676	NA	NA	NA	NA	NA	0.696	NA	3.1332
1339	20	23586184	23586184	T	C	intronic	CST9	NA	NA	NA	intronic	ENSG00000173335	NA	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	rs2983639	0.74	0.74	0.692	0.715256	0.8668	0.7986	0.7767	0.4395	0.8027	0.88	0.79	0.79	0.41	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.291051	NA	NA	NA	NA	NA	0.688	NA	3.1332
1339	19	53905469	53905469	A	G	intronic	ZNF765	NA	NA	NA	intronic	ENSG00000196417	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs3975046	0.21	0.21	0.21	0.175919	0.3161	0.0407	0.2075	0.2141	0.0971	0.31	0.06	0.25	0.22	0.2426	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.332054	NA	NA	0.308346	0.244209	NA	0.283	NA	3.132954
1339	12	9344878	9344878	A	G	intronic	PZP	NA	NA	NA	intronic	ENSG00000126838	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs2075394	0.33	0.33	0.341	0.309305	0.3082	0.3819	0.2363	0.3041	0.2945	0.29	0.38	0.28	0.35	0.2788	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.8861	NA	NA	0.280349	0.302542	NA	0.384	NA	3.132651
1339	19	15132545	15132545	T	C	intronic	CCDC105	NA	NA	NA	intronic	ENSG00000105143,ENSG00000160994	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs736737	0.2	0.2	0.185	0.176518	0.3121	0.0794	0.2118	0.1846	0.1012	0.3	0.08	0.22	0.17	0.2421	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.223021	NA	NA	0.313372	0.211076	NA	0.246	NA	3.132428
1339	4	54967709	54967709	C	A	intronic	GSX2	NA	NA	NA	intronic	ENSG00000145216,ENSG00000180613	NA	NA	NA	NA	NA	4q12	NA	Name=SUZ12,Max	NA	NA	rs2278142	0.62	0.62	0.575	0.599641	0.6113	0.8423	0.7219	0.2859	0.6748	0.61	0.83	0.69	0.33	0.6389	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.053533	NA	NA	0.617469	0.339237	NA	0.565	NA	3.132331
1339	19	18895218	18895218	G	A	intronic	COMP	NA	NA	NA	intronic	ENSG00000105664	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs12327738	0.22	0.22	0.23	0.198682	0.2813	0.1032	0.2435	0.2224	0.1483	0.29	0.1	0.24	0.24	0.272	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.156577	NA	NA	0.314492	0.249205	NA	0.145	NA	3.132208
1339	15	87099537	87099537	T	C	intronic	AGBL1	NA	NA	NA	intronic	ENSG00000166748	NA	NA	NA	NA	NA	15q25.3	NA	Name=FOXA1_(SC-101058),JunD,FOSL2,FOXA1_(C-20),KAP1	NA	NA	rs752270	0.76	0.76	0.786	0.753195	0.6054	0.8948	0.5591	0.9486	0.6329	0.63	0.88	0.59	0.93	0.6587	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.793234	NA	NA	0.603872	0.899678	NA	0.725	NA	3.132028
1339	1	152079823	152079823	C	G	UTR3	TCHH	NM_007113:c.*38G>C	NA	NA	UTR3	ENSG00000159450	ENST00000368804:c.*38G>C	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs1131473	0.42	0.42	0.413	0.470248	0.3688	0.496	0.585	0.2806	0.7229	0.38	0.53	0.51	0.28	0.4365	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.142852	NA	NA	0.396706	0.274728	NA	0.464	NA	3.1313274
1339	20	47739555	47739555	A	G	intronic	STAU1	NA	NA	NA	intronic	ENSG00000124214	NA	NA	NA	NA	NA	20q13.13	NA	NA	NA	NA	rs348260	0.79	0.79	0.82	0.796725	0.8688	0.6071	0.7248	0.9599	0.7485	0.86	0.59	0.77	0.94	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.231932	NA	NA	NA	NA	NA	0.79	NA	3.1312
1339	6	69666520	69666520	T	C	intronic	BAI3	NA	NA	NA	intronic	ENSG00000135298	NA	NA	NA	NA	NA	6q12	NA	NA	NA	NA	rs7757138	0.23	0.23	0.239	0.222045	0.3052	0.0496	0.1873	0.3283	0.1953	0.31	0.06	0.19	0.35	0.2561	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.101706	NA	NA	0.307558	0.312074	NA	0.297	NA	3.131142
1339	5	1325803	1325803	A	G	intronic	CLPTM1L	NA	NA	NA	intronic	ENSG00000049656	NA	NA	NA	NA	NA	5p15.33	NA	NA	NA	NA	rs465498	0.39	0.39	0.382	0.363019	0.4414	0.1944	0.3055	0.5877	0.1933	0.46	0.16	0.35	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.559999	NA	NA	0.427718	0.57659	NA	0.391	NA	3.130882
1339	1	35152490	35152490	C	T	intergenic	C1orf94,GJB5	dist=467759;dist=68158	NA	NA	intergenic	ENSG00000207941,ENSG00000163866	dist=17195;dist=25848	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	rs1177663	0.24	0.24	0.241	0.247404	0.2028	0.121	0.3761	0.3502	0.1933	0.19	0.14	0.37	0.36	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.110206	NA	NA	NA	NA	NA	0.268	NA	3.1305334
1339	14	74040341	74040341	T	C	intronic	ACOT2	NA	NA	NA	intronic	ENSG00000119673	NA	NA	NA	NA	NA	14q24.3	NA	NA	NA	NA	rs34585397	0.34	0.34	0.262	0.288139	0.2883	0.369	0.3256	0.2685	0.2045	0.32	0.41	0.35	0.29	0.2976	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.254104	NA	NA	0.283837	0.245801	NA	0.217	NA	3.130263
1339	3	72933319	72933319	A	G	intergenic	SHQ1,GXYLT2	dist=35721;dist=4066	NA	NA	upstream	ENSG00000271266	NA	NA	NA	NA	NA	3p13	NA	NA	NA	NA	rs6768747	0.35	0.35	0.352	0.355631	0.3698	0.0565	0.3084	0.6989	0.2188	0.37	0.04	0.33	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.844513	NA	NA	NA	NA	NA	0.341	NA	3.1302
1339	4	154556798	154556798	C	G	intronic	KIAA0922	NA	NA	NA	intronic	ENSG00000121210	NA	NA	NA	NA	NA	4q31.3	NA	NA	NA	NA	rs2278576	0.78	0.78	0.783	0.748602	0.8698	0.7738	0.7853	0.5961	0.7781	0.86	0.8	0.78	0.62	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.636393	NA	NA	NA	NA	NA	0.862	NA	3.1302
1339	5	147516598	147516598	T	C	UTR3	SPINK5	NM_006846:c.*44T>C,NM_001127698:c.*44T>C	NA	NA	UTR3	ENSG00000133710	ENST00000359874:c.*44T>C,ENST00000256084:c.*44T>C	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs4349706	0.49	0.49	0.499	0.491014	0.4076	0.5188	0.3602	0.6097	0.4806	0.44	0.54	0.41	0.57	0.4117	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.176354	NA	NA	0.384125	0.570016	NA	0.522	NA	3.1299084
1339	10	27444329	27444329	T	C	UTR5	MASTL	NM_032844:c.-27T>C,NM_001172303:c.-27T>C,NM_001172304:c.-27T>C	NA	NA	UTR5	ENSG00000120539	ENST00000375946:c.-27T>C,ENST00000342386:c.-27T>C,ENST00000375940:c.-27T>C	NA	NA	NA	NA	10p12.1	NA	Name=JunD,Pol2-4H8,c-Jun,Sin3Ak-20,HA-E2F1,YY1,RFX5_(N-494),NFKB,HEY1,c-Myc,CCNT2,IRF1,TBP,Nrf1,HMGN3,GABP,E2F4,E2F6_(H-50),TAF1,TAF7_(SQ-8),BRCA1_(C-1863),YY1_(C-20),MEF2C_(SC-13268),TCF4,SP1,NRSF,Pol2	NA	NA	rs7907981	0.8	0.8	0.627	0.815495	0.7744	0.9841	0.6873	0.7746	0.8303	0.75	0.97	0.67	0.76	0.8129	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.197613	NA	NA	0.616274	0.664193	NA	0.246	NA	3.1297594
1339	18	334758	334758	T	C	exonic	COLEC12	NA	synonymous SNV	COLEC12:NM_130386:exon6:c.A1800G:p.P600P	exonic	ENSG00000158270	NA	synonymous SNV	ENSG00000158270:ENST00000400256:exon6:c.A1800G:p.P600P	NA	NA	18p11.32	NA	NA	NA	NA	rs2305026	0.9	0.9	0.888	0.884984	0.8469	0.9861	0.8746	0.9334	0.7618	0.84	0.99	0.84	0.94	0.8588	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.167655	NA	NA	0.831395	0.905129	NA	0.928	NA	3.1295716
1339	11	1213806	1213806	T	C	intergenic	MUC2,MUC5B	dist=109389;dist=30489	NA	NA	intergenic	ENSG00000215182,ENSG00000117983	dist=51445;dist=30490	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs28653192	0.13	0.13	0.119	0.105631	0.2038	0.003	0.0965	0.1528	0.0532	0.21	0.0035	0.12	0.15	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.563441	NA	NA	NA	NA	NA	0.072	NA	3.1295334
1339	10	71697516	71697516	G	C	intronic	COL13A1	NA	NA	NA	intronic	ENSG00000197467	NA	NA	NA	NA	NA	10q22.1	NA	NA	NA	NA	rs3750781	0.33	0.33	0.301	0.340655	0.2555	0.4157	0.353	0.3419	0.3405	0.26	0.42	0.31	0.32	0.3196	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.053137	NA	NA	0.295371	0.30747	NA	0.406	NA	3.129529
1339	20	50225206	50225206	G	A	intronic	ATP9A	NA	NA	NA	intronic	ENSG00000054793	NA	NA	NA	NA	NA	20q13.2	NA	NA	NA	NA	rs3827032	0.21	0.21	0.18	0.213458	0.3022	0.0972	0.3026	0.177	0.228	0.29	0.1	0.29	0.17	0.2684	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.929826	NA	NA	0.3	0.204721	NA	0.152	NA	3.1294
1339	6	56476262	56476262	T	C	ncRNA_intronic	RNU6-71P	NA	NA	NA	intronic	ENSG00000151914	NA	NA	NA	NA	NA	6p12.1	NA	NA	NA	NA	rs7747060	0.38	0.38	0.377	0.378594	0.3976	0.2728	0.3833	0.5008	0.2996	0.38	0.26	0.4	0.52	0.3859	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.153161	NA	NA	0.420613	0.485042	NA	0.435	NA	3.1292203
1339	14	20916249	20916249	T	C	intronic	OSGEP	NA	NA	NA	intronic	ENSG00000092094	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs2275008	0.27	0.27	0.269	0.244808	0.3191	0.0972	0.2291	0.3752	0.1554	0.32	0.1	0.27	0.4	0.2581	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.883365	NA	NA	0.293953	0.333863	NA	0.304	NA	3.128847
1339	11	26732923	26732923	A	G	intronic	SLC5A12	NA	NA	NA	intronic	ENSG00000148942	NA	NA	NA	NA	NA	11p14.2	NA	NA	NA	NA	rs4322349	0.31	0.31	0.262	0.296326	0.2704	0.4127	0.4553	0.146	0.2935	0.27	0.42	0.41	0.14	0.3153	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.876602	NA	NA	0.285764	0.177939	ID=COSN163902;OCCURENCE=1(breast)	0.319	NA	3.128536
1339	11	1221985	1221985	C	T	intergenic	MUC2,MUC5B	dist=117568;dist=22310	NA	NA	intergenic	ENSG00000215182,ENSG00000117983	dist=59624;dist=22311	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs3087562	0.14	0.14	0.139	0.118211	0.2048	0.003	0.098	0.1982	0.0542	0.21	0.0035	0.12	0.19	NA	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.480955	NA	NA	NA	NA	NA	0.138	NA	3.1285334
1339	14	24656251	24656251	C	T	intronic	IPO4	NA	NA	NA	intronic	ENSG00000196497,ENSG00000259522	NA	NA	NA	NA	NA	14q12	NA	NA	NA	NA	rs2295978	0.32	0.32	0.333	0.341054	0.2694	0.4216	0.2421	0.3124	0.4407	0.26	0.44	0.26	0.31	0.3122	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.060106	NA	NA	0.290108	0.302801	NA	0.29	NA	3.128292
1339	20	40049099	40049099	G	A	intronic	CHD6	NA	NA	NA	intronic	ENSG00000124177	NA	NA	NA	NA	NA	20q12	NA	NA	NA	NA	rs6029672	0.34	0.34	0.346	0.328674	0.2565	0.3631	0.2363	0.475	0.2352	0.25	0.37	0.26	0.49	0.3068	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.138133	NA	NA	0.308488	0.443259	NA	0.399	NA	3.128212
1339	3	190030680	190030680	A	G	exonic	CLDN1	NA	synonymous SNV	CLDN1:NM_021101:exon2:c.T369C:p.G123G	exonic	ENSG00000163347	NA	synonymous SNV	ENSG00000163347:ENST00000295522:exon2:c.T369C:p.G123G	NA	NA	3q28	NA	NA	NA	NA	rs9869263	0.82	0.82	0.83	0.811102	0.8579	0.8224	0.8026	0.7489	0.8415	0.85	0.83	0.81	0.76	0.8334	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.61062	NA	NA	0.847791	0.769632	NA	0.833	NA	3.1275756
1339	19	12491779	12491779	T	C	intergenic	ZNF442,ZNF799	dist=15304;dist=9049	NA	NA	ncRNA_exonic	ENSG00000248406	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs17706075	0.4	0.4	0.408	0.404752	0.4374	0.0774	0.3674	0.7156	0.3149	0.45	0.07	0.42	0.68	0.4354	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.557902	NA	NA	NA	NA	NA	0.464	NA	3.1272
1339	17	1707893	1707893	T	A	intronic	SMYD4	NA	NA	NA	intronic	ENSG00000186532	NA	NA	NA	NA	NA	17p13.3	NA	NA	NA	NA	rs8072508	0.32	0.32	0.336	0.332668	0.2783	0.1905	0.2464	0.5862	0.2536	0.25	0.21	0.3	0.56	0.2938	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.434769	NA	NA	0.300814	0.561734	NA	0.471	NA	3.127086
1339	17	49097501	49097501	C	A	intronic	SPAG9	NA	NA	NA	intronic	ENSG00000008294	NA	NA	NA	NA	NA	17q21.33	NA	NA	NA	NA	rs2286649	0.23	0.23	0.193	0.209864	0.2932	0.2302	0.3314	0.0507	0.2321	0.29	0.23	0.33	0.06	0.286	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.221344	NA	NA	0.293789	0.086927	ID=COSN165464;OCCURENCE=1(breast),1(urinary_tract)	0.203	NA	3.127011
1339	1	116292448	116292448	A	G	intronic	CASQ2	NA	NA	NA	intronic	ENSG00000118729	NA	NA	NA	NA	NA	1p13.1	NA	NA	NA	NA	rs10754355	0.66	0.66	0.617	0.64397	0.8738	0.7421	0.7608	0.2829	0.7117	0.86	0.68	0.78	0.25	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.506629	NA	NA	NA	NA	NA	0.688	NA	3.1262
1339	15	72901349	72901349	C	T	intergenic	MIR630,GOLGA6B	dist=21695;dist=45689	NA	NA	ncRNA_intronic	ENSG00000259783,ENSG00000260144	NA	NA	NA	NA	NA	15q24.1	NA	NA	NA	NA	rs7495835	0.63	0.63	0.519	0.638379	0.8738	0.7649	0.768	0.1036	0.8967	0.83	0.72	0.76	0.12	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.849951	NA	NA	NA	NA	NA	0.486	NA	3.1262
1339	3	49847623	49847623	A	G	intronic	UBA7	NA	NA	NA	intronic	ENSG00000182179	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs1799845	0.21	0.21	0.209	0.223442	0.3101	0.1498	0.2017	0.1369	0.3425	0.3	0.17	0.19	0.13	0.2667	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.337302	NA	NA	0.29786	0.161217	NA	0.159	NA	3.12534
1339	5	481610	481610	T	C	intronic	SLC9A3	NA	NA	NA	intronic	ENSG00000066230	NA	NA	NA	NA	NA	5p15.33	NA	NA	NA	NA	rs6872510	0.8	0.8	0.779	0.801717	0.8748	0.5694	0.8127	0.9584	0.7464	0.87	0.54	0.83	0.96	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.708148	NA	NA	NA	NA	NA	0.862	NA	3.1252
1339	15	72901353	72901353	A	G	intergenic	MIR630,GOLGA6B	dist=21699;dist=45685	NA	NA	ncRNA_intronic	ENSG00000259783,ENSG00000260144	NA	NA	NA	NA	NA	15q24.1	NA	NA	NA	NA	rs7495802	0.61	0.61	0.529	0.638379	0.8748	0.7639	0.768	0.1036	0.8967	0.8	0.7	0.73	0.11	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.743104	NA	NA	NA	NA	NA	0.478	NA	3.1252
1340	9	93650015	93650015	T	A	intronic	SYK	NA	NA	NA	intronic	ENSG00000165025	NA	NA	NA	NA	NA	9q22.2	NA	NA	NA	NA	rs2126053	0.19	0.19	0.175	0.171126	0.3091	NA	0.219	0.2216	0.1033	0.28	NA	0.25	0.22	0.246	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.485774	1.485774	NA	0.320116	0.226282	NA	0.196	NA	3.124784
1340	10	126100523	126100523	G	A	intronic	OAT	NA	NA	NA	intronic	ENSG00000065154	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs10794058	0.24	0.24	0.268	0.254593	0.2922	0.2222	0.196	0.2504	0.2965	0.29	0.22	0.18	0.24	0.2792	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.169755	NA	NA	0.304186	0.261689	NA	0.457	NA	3.124414
1340	10	98240035	98240035	A	T	intronic	TLL2	NA	NA	NA	intronic	ENSG00000095587	NA	NA	NA	NA	NA	10q24.1	NA	NA	NA	NA	rs2281801	0.89	0.89	0.89	0.846645	0.8757	0.8353	0.8804	0.8714	0.771	0.88	0.88	0.9	0.9	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.049749	NA	NA	NA	NA	NA	0.906	NA	3.1243
1340	15	34546451	34546451	G	C	intronic	SLC12A6	NA	NA	NA	intronic	ENSG00000140199	NA	NA	NA	NA	NA	15q14	NA	NA	NA	NA	rs2615358	0.81	0.81	0.819	0.777955	0.8757	0.995	0.7536	0.5303	0.8057	0.87	1	0.75	0.55	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.018535	NA	NA	NA	NA	NA	0.812	NA	3.1243
1340	14	24534781	24534781	G	A	intronic	LRRC16B	NA	NA	NA	intronic	ENSG00000186648	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs12590548	0.33	0.33	0.312	0.332268	0.2763	0.4732	0.2637	0.2224	0.4417	0.28	0.51	0.27	0.23	0.3109	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.23355	1.23355	NA	0.288542	0.224467	NA	0.261	NA	3.124258
1340	22	22843118	22843118	C	T	exonic	ZNF280B	NA	synonymous SNV	ZNF280B:NM_080764:exon4:c.G606A:p.S202S	exonic	ENSG00000198477	NA	synonymous SNV	ENSG00000198477:ENST00000360412:exon4:c.G606A:p.S202S,ENSG00000198477:ENST00000406426:exon4:c.G606A:p.S202S	NA	NA	22q11.22	NA	NA	NA	NA	rs2236730	0.79	0.79	0.778	0.746605	0.8738	0.7421	0.8516	0.6611	0.6616	0.87	0.74	0.83	0.68	0.8054	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.628125	NA	NA	0.86407	0.678393	NA	0.746	NA	3.1233966
1340	2	208546877	208546877	T	G	intergenic	METTL21A,CCNYL1	dist=56904;dist=29387	NA	NA	downstream	ENSG00000213082	NA	NA	NA	NA	NA	2q33.3	NA	NA	NA	NA	rs2551916	0.44	0.44	0.304	0.455671	0.3767	0.6696	0.428	0.323	0.5153	0.37	0.65	0.43	0.32	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.202606	NA	NA	NA	NA	NA	0.333	NA	3.1233
1340	2	208546880	208546880	C	T	intergenic	METTL21A,CCNYL1	dist=56907;dist=29384	NA	NA	downstream	ENSG00000213082	NA	NA	NA	NA	NA	2q33.3	NA	NA	NA	NA	rs2663863	0.42	0.42	0.305	0.438498	0.3767	0.6696	0.4179	0.2632	0.5153	0.37	0.65	0.42	0.26	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.342576	NA	NA	NA	NA	NA	0.326	NA	3.1233
1340	12	121603856	121603856	C	G	intronic	P2RX7	NA	NA	NA	intronic	ENSG00000089041	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs208307	0.24	0.24	0.243	0.253195	0.2853	0.13	0.1671	0.3389	0.2924	0.29	0.12	0.17	0.36	0.281	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.757388	1.757388	NA	0.310465	0.324557	NA	0.225	NA	3.123235
1340	9	117064306	117064306	T	C	intronic	COL27A1	NA	NA	NA	intronic	ENSG00000196739	NA	NA	NA	NA	NA	9q32	NA	NA	NA	NA	rs1546049	0.51	0.51	0.502	0.558906	0.4274	0.6935	0.4755	0.5272	0.6575	0.44	0.63	0.48	0.51	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.78182	NA	NA	0.449403	0.526734	NA	0.536	NA	3.123197
1340	19	45769575	45769575	G	A	intronic	MARK4	NA	NA	NA	intronic	ENSG00000007047	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs2240672	0.24	0.24	0.219	0.216054	0.2952	0.1012	0.1816	0.295	0.1708	0.31	0.1	0.24	0.28	0.2609	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.752221	NA	NA	0.320814	0.317522	NA	0.188	NA	3.123086
1340	19	52133060	52133060	G	T	intronic	SIGLEC5	NA	NA	NA	intronic	ENSG00000105501,ENSG00000268500	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs2278833	0.42	0.42	0.35	0.420128	0.2724	0.8452	0.33	0.2912	0.3722	0.22	0.85	0.26	0.33	0.3682	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.089214	NA	NA	0.236405	0.31274	NA	0.123	NA	3.122995
1340	1	117715026	117715026	C	T	intronic	VTCN1	NA	NA	NA	intronic	ENSG00000134258	NA	NA	NA	NA	NA	1p13.1	NA	NA	Name=2	NA	rs6657810	0.67	0.67	0.677	0.653954	0.6203	0.9157	0.6556	0.4932	0.635	0.63	0.9	0.6	0.52	0.6476	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.326362	NA	NA	0.609493	0.523402	NA	0.58	NA	3.122607
1340	6	35205881	35205881	G	A	intronic	SCUBE3	NA	NA	NA	intronic	ENSG00000146197	NA	NA	NA	NA	NA	6p21.31	NA	NA	NA	NA	rs734538	0.92	0.92	0.915	0.922125	0.8777	0.9891	0.9092	0.8865	0.956	0.88	0.99	0.9	0.9	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.402086	NA	NA	NA	NA	NA	0.833	NA	3.1223
1340	19	7076255	7076255	T	C	intronic	ZNF557	NA	NA	NA	intronic	ENSG00000130544	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs1808555	0.83	0.83	0.837	0.830471	0.8777	0.7192	0.8573	0.8638	0.8323	0.86	0.73	0.86	0.9	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.416375	NA	NA	NA	NA	NA	0.87	NA	3.1223
1340	7	130292531	130292531	T	C	intronic	COPG2	NA	NA	NA	intergenic	ENSG00000239021,ENSG00000158623	dist=4741;dist=3289	NA	NA	NA	NA	7q32.2	NA	NA	NA	NA	rs12706946	0.46	0.46	0.397	0.414537	0.5447	0.6052	0.5216	0.0514	0.499	0.54	0.63	0.51	0.08	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.33094	NA	NA	NA	NA	NA	0.399	NA	3.1219667
1340	22	47064837	47064837	A	C	intronic	GRAMD4	NA	NA	NA	intronic	ENSG00000075240	NA	NA	NA	NA	NA	22q13.31	NA	NA	NA	NA	rs2076711	0.28	0.28	0.254	0.231829	0.3082	0.3988	0.3329	0.0227	0.1922	0.3	0.4	0.36	0.03	0.2736	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.183499	NA	NA	0.296395	0.06179	NA	0.239	NA	3.121805
1340	12	67696052	67696052	A	T	intronic	CAND1	NA	NA	NA	intronic	ENSG00000111530	NA	NA	NA	NA	NA	12q14.3	NA	NA	Name=6	NA	rs1143954	0.49	0.49	0.465	0.463858	0.6491	0.3194	0.562	0.3442	0.5143	0.65	0.29	0.59	0.39	0.5754	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.039821	NA	NA	0.653828	0.399091	NA	0.471	NA	3.121672
1340	10	96018510	96018510	A	T	intronic	PLCE1	NA	NA	NA	intronic	ENSG00000138193	NA	NA	NA	NA	NA	10q23.33	NA	NA	NA	NA	rs4918182	0.27	0.27	0.264	0.277556	0.3002	0.2996	0.2334	0.233	0.3231	0.29	0.3	0.25	0.22	0.2895	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.843129	NA	NA	0.28866	0.227661	NA	0.225	NA	3.12164
1340	9	85905666	85905666	A	G	intronic	FRMD3	NA	NA	NA	intronic	ENSG00000172159	NA	NA	NA	NA	NA	9q21.32	NA	NA	Name=2	NA	rs942283	0.57	0.57	0.528	0.574681	0.6233	0.6944	0.5836	0.2806	0.7924	0.64	0.67	0.6	0.32	0.6339	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.744052	NA	NA	0.62126	0.367915	ID=COSN168580;OCCURENCE=2(large_intestine)	0.384	NA	3.12154
1340	16	20448520	20448520	T	C	intronic	ACSM5	NA	NA	NA	intronic	ENSG00000183549	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs7499667	0.4	0.4	0.411	0.455871	0.2584	0.756	0.2651	0.5068	0.4162	0.24	0.69	0.25	0.41	0.3462	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.343223	NA	NA	0.273953	0.445302	NA	0.377	NA	3.121447
1340	17	39406447	39406447	A	G	UTR3	KRTAP9-4	NM_033191:c.*10A>G	NA	NA	UTR3	ENSG00000241595	ENST00000334109:c.*10A>G	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs3967754	0.64	0.64	0.51	0.623403	0.6799	0.5516	0.7089	0.4977	0.7485	0.7	0.63	0.74	0.51	0.5323	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.23395	NA	NA	NA	NA	NA	0.268	NA	3.1211334
1340	12	11091432	11091432	C	T	exonic	TAS2R14	NA	synonymous SNV	TAS2R14:NM_023922:exon1:c.G375A:p.R125R	exonic	ENSG00000212127	NA	synonymous SNV	ENSG00000212127:ENST00000537503:exon1:c.G375A:p.R125R	NA	NA	12p13.2	NA	NA	NA	NA	rs3741843	0.81	0.81	0.785	0.775759	0.8638	0.9226	0.8444	0.5015	0.8558	0.88	0.94	0.85	0.52	0.843	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.327071	NA	NA	0.838995	0.55379	NA	0.797	NA	3.1208716
1340	3	49736172	49736172	C	A	intronic	RNF123	NA	NA	NA	intronic	ENSG00000164068	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs11130216	0.22	0.22	0.237	0.238219	0.3091	0.1518	0.2017	0.2095	0.319	0.3	0.17	0.19	0.17	0.2694	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.10926	NA	NA	0.300698	0.207217	NA	0.174	NA	3.120802
1340	21	47858272	47858272	T	C	intronic	PCNT	NA	NA	NA	intronic	ENSG00000160299	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs2051190	0.28	0.28	0.251	0.292732	0.2913	0.379	0.3458	0.1634	0.3425	0.28	0.34	0.33	0.18	0.2988	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.241986	NA	NA	0.289186	0.193373	NA	0.239	NA	3.120714
1340	1	3548136	3548136	T	C	exonic	WRAP73	NA	synonymous SNV	WRAP73:NM_017818:exon11:c.A1134G:p.A378A	exonic	ENSG00000116213	NA	synonymous SNV	ENSG00000116213:ENST00000270708:exon11:c.A1134G:p.A378A,ENSG00000116213:ENST00000378322:exon11:c.A1134G:p.A378A	NA	NA	1p36.32	NA	NA	NA	NA	rs2760321	0.89	0.89	0.875	0.90615	0.836	0.995	0.8458	0.8926	0.9479	0.83	0.99	0.84	0.88	0.8727	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.404851	NA	NA	0.837326	0.876193	NA	0.826	NA	3.1206406
1340	6	144178419	144178419	T	C	intronic	LTV1	NA	NA	NA	intronic	ENSG00000135521	NA	NA	NA	NA	NA	6q24.2	NA	NA	NA	NA	rs3818089	0.41	0.41	0.424	0.461062	0.2614	0.506	0.3401	0.6672	0.4274	0.27	0.53	0.31	0.58	0.3543	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.214479	NA	NA	0.263721	0.583749	NA	0.413	NA	3.120579
1340	5	178268179	178268179	A	G	intergenic	AACSP1,ZNF354B	dist=64902;dist=18775	NA	NA	downstream	ENSG00000253725	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs7448857	0.34	0.34	0.286	0.336462	0.3797	0.4097	0.3026	0.2443	0.365	0.37	0.38	0.35	0.24	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.856627	NA	NA	NA	NA	NA	0.442	NA	3.1203
1340	6	38994568	38994568	A	G	intronic	DNAH8	NA	NA	NA	intronic	ENSG00000124721	NA	NA	NA	NA	NA	6p21.2	NA	NA	NA	NA	rs2273093	0.81	0.81	0.794	0.793131	0.8797	0.8581	0.8314	0.6331	0.8262	0.89	0.86	0.81	0.62	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.692369	NA	NA	NA	NA	NA	0.804	NA	3.1203
1340	16	88780023	88780023	G	A	intronic	CTU2	NA	NA	NA	intronic	ENSG00000174177	NA	NA	NA	NA	NA	16q24.3	NA	NA	NA	NA	rs1317756	0.18	0.18	0.188	0.196286	0.3111	0.0883	0.1801	0.0998	0.3313	0.29	0.08	0.21	0.11	0.2617	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.35834	NA	NA	0.306993	0.130892	NA	0.196	NA	3.120207
1340	6	145148690	145148690	A	C	intronic	UTRN	NA	NA	NA	intronic	ENSG00000152818	NA	NA	NA	NA	NA	6q24.2	NA	NA	NA	NA	rs2066054	0.74	0.74	0.754	0.766573	0.4304	0.9563	0.7118	0.9826	0.6636	0.44	0.97	0.68	0.97	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.163543	NA	NA	0.449403	0.902457	NA	0.63	NA	3.120197
1340	4	17625209	17625209	G	C	intronic	MED28	NA	NA	NA	intronic	ENSG00000118579	NA	NA	NA	NA	NA	4p15.32	NA	NA	Name=43	NA	rs11733730	0.67	0.67	0.672	0.637181	0.6262	0.8552	0.6945	0.4977	0.5716	0.63	0.87	0.67	0.48	0.6493	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.182293	NA	NA	0.605	0.54562	NA	0.703	NA	3.1195
1340	12	131620578	131620578	C	T	intronic	GPR133	NA	NA	NA	intronic	ENSG00000111452	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs884522	0.21	0.21	0.205	0.20647	0.3032	0.2083	0.1916	0.0129	0.3773	0.32	0.22	0.2	0.02	0.2751	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.134546	NA	NA	0.302209	0.067635	NA	0.138	NA	3.119491
1340	22	32626908	32626908	G	A	intronic	SLC5A4	NA	NA	NA	ncRNA_intronic	ENSG00000242082	NA	NA	NA	NA	NA	22q12.3	NA	NA	NA	NA	rs2068209	0.34	0.34	0.393	0.348043	0.4175	0.0665	0.2968	0.5726	0.2996	0.41	0.05	0.3	0.59	0.3809	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.137785	NA	NA	0.415465	0.539719	NA	0.406	NA	3.1194683
1340	15	34546434	34546434	T	C	intronic	SLC12A6	NA	NA	NA	intronic	ENSG00000140199	NA	NA	NA	NA	NA	15q14	NA	NA	NA	NA	rs2705344	0.83	0.83	0.838	0.799121	0.8807	0.994	0.7594	0.5877	0.8282	0.87	1	0.75	0.63	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.224667	NA	NA	NA	NA	NA	0.855	NA	3.1193
1340	12	11338983	11338983	T	C	exonic	TAS2R42	NA	synonymous SNV	TAS2R42:NM_181429:exon1:c.A561G:p.L187L	exonic	ENSG00000186136	NA	synonymous SNV	ENSG00000186136:ENST00000334266:exon1:c.A561G:p.L187L	NA	NA	12p13.2	NA	NA	NA	NA	rs1650019	0.79	0.79	0.765	0.760783	0.8688	0.9514	0.8473	0.407	0.8701	0.88	0.97	0.85	0.42	0.8395	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.448456	NA	NA	0.839119	0.469891	NA	0.754	NA	3.1192476
1340	1	10355834	10355834	C	T	intronic	KIF1B	NA	NA	NA	intronic	ENSG00000054523	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs3753037	0.29	0.29	0.265	0.263978	0.3052	0.2887	0.3256	0.1823	0.2628	0.31	0.31	0.36	0.18	0.2787	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.733644	NA	NA	0.296977	0.18611	ID=COSM146391,COSM146392;OCCURENCE=1(stomach)	0.239	NA	3.119123
1340	19	33586739	33586739	G	C	intronic	GPATCH1	NA	NA	NA	intronic	ENSG00000076650	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs13345542	0.44	0.44	0.444	0.533347	0.2416	0.5089	0.2867	0.8003	0.6728	0.25	0.5	0.3	0.78	0.3707	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.925354	NA	NA	0.268953	0.727644	NA	0.449	NA	3.118747
1340	10	124183732	124183732	T	C	exonic	PLEKHA1	NA	synonymous SNV	PLEKHA1:NM_001001974:exon9:c.T699C:p.R233R,PLEKHA1:NM_021622:exon9:c.T699C:p.R233R,PLEKHA1:NM_001195608:exon10:c.T699C:p.R233R	exonic	ENSG00000107679	NA	synonymous SNV	ENSG00000107679:ENST00000433307:exon8:c.T699C:p.R233R,ENSG00000107679:ENST00000368988:exon9:c.T699C:p.R233R,ENSG00000107679:ENST00000368989:exon9:c.T699C:p.R233R,ENSG00000107679:ENST00000368990:exon9:c.T699C:p.R233R,ENSG00000107679:ENST00000392799:exon10:c.T699C:p.R233R,ENSG00000107679:ENST00000538022:exon10:c.T699C:p.R233R	NA	NA	10q26.13	NA	NA	NA	NA	rs4405249	0.92	0.92	0.937	0.940296	0.8181	1	0.9179	0.9834	0.9622	0.84	1	0.92	0.97	0.8884	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.603788	NA	NA	0.841512	0.960281	NA	0.942	NA	3.1186546
1340	16	84351828	84351828	G	A	intronic	WFDC1	NA	NA	NA	intronic	ENSG00000103175	NA	NA	NA	NA	NA	16q24.1	NA	NA	NA	NA	rs187372	0.3	0.3	0.266	0.303514	0.3032	0.5863	0.2406	0.0514	0.3978	0.29	0.54	0.27	0.05	0.2942	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.838266	NA	NA	0.283953	0.100682	NA	0.362	NA	3.118647
1340	8	124089526	124089526	C	A	intronic	WDR67	NA	NA	NA	intronic	ENSG00000156787	NA	NA	NA	NA	NA	8q24.13	NA	NA	NA	NA	rs13254600	0.24	0.24	0.218	0.239018	0.2982	0.1071	0.3069	0.2753	0.2168	0.3	0.11	0.33	0.26	0.2778	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.179859	NA	NA	0.305581	0.258057	NA	0.203	NA	3.118419
1340	17	18916893	18916893	T	C	intronic	SLC5A10	NA	NA	NA	intronic	ENSG00000154025	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs11652575	NA	NA	0.528	0.510184	0.8817	0.3006	0.562	0.4592	0.3763	NA	NA	NA	NA	NA	0.25	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.755473	NA	NA	NA	NA	NA	0.312	NA	3.1183
1340	19	8167830	8167830	A	G	intronic	FBN3	NA	NA	NA	intronic	ENSG00000142449	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs12986396	0.68	0.68	0.662	0.660144	0.8817	0.7272	0.683	0.295	0.8405	0.88	0.72	0.72	0.29	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.773837	NA	NA	NA	NA	NA	0.71	NA	3.1183
1340	2	171257945	171257945	A	T	intronic	MYO3B	NA	NA	NA	intronic	ENSG00000071909	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	rs7568041	0.24	0.24	0.241	0.22484	0.3062	0.2927	0.1758	0.1225	0.2444	0.3	0.27	0.2	0.14	0.2733	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.578534	NA	NA	0.302401	0.141299	NA	0.225	NA	3.118099
1340	10	127484617	127484617	C	G	intronic	UROS	NA	NA	NA	intronic	ENSG00000188690	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs2281955	0.39	0.39	0.395	0.400559	0.4433	0.3065	0.3372	0.4387	0.4468	0.44	0.31	0.36	0.41	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.58281	NA	NA	0.438718	0.424133	NA	0.384	NA	3.117982
1340	19	8996019	8996019	A	T	intronic	MUC16	NA	NA	NA	intronic	ENSG00000181143	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs73493652	0.36	0.36	0.367	0.432508	0.2714	0.4137	0.2839	0.5915	0.5082	0.27	0.36	0.27	0.59	0.3386	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.643356	NA	NA	0.272542	0.521163	NA	0.442	NA	3.117458
1340	14	94914455	94914455	A	T	intronic	SERPINA11	NA	NA	NA	ncRNA_intronic	ENSG00000256357	NA	NA	NA	NA	NA	14q32.13	NA	NA	Name=9	NA	rs10129672	0.74	0.74	0.716	0.741414	0.7694	0.63	0.7032	0.8003	0.7751	0.79	0.64	0.7	0.8	0.7264	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.145643	NA	NA	0.720465	0.76532	NA	0.703	NA	3.1170683
1340	13	33635463	33635463	T	C	exonic	KL	NA	synonymous SNV	KL:NM_004795:exon4:c.T2247C:p.A749A	exonic	ENSG00000133116	NA	synonymous SNV	ENSG00000133116:ENST00000380099:exon4:c.T2247C:p.A749A	NA	NA	13q13.1	NA	NA	NA	NA	rs648202	0.73	0.73	0.679	0.710863	0.8787	0.6071	0.8285	0.5386	0.7945	0.89	0.61	0.82	0.56	0.8036	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.812176	NA	NA	0.867442	0.576714	NA	0.754	NA	3.1169246
1340	21	47685787	47685787	T	C	intronic	MCM3AP	NA	NA	NA	intronic	ENSG00000160294	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs9637172	0.37	0.37	0.339	0.366813	0.4324	0.2798	0.5086	0.2905	0.3916	0.43	0.26	0.5	0.31	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.493123	NA	NA	0.450779	0.332192	NA	0.275	NA	3.116821
1340	20	30363645	30363645	T	C	intronic	TPX2	NA	NA	NA	intronic	ENSG00000088325	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs6060938	0.32	0.32	0.327	0.298722	0.3161	0.001	0.2435	0.7042	0.0787	0.33	0.0017	0.29	0.72	0.277	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.825606	NA	NA	0.290465	0.607354	NA	0.312	NA	3.116435
1340	11	23426632	23426632	T	C	intergenic	CCDC179,LUZP2	dist=544660;dist=1091884	NA	NA	ncRNA_exonic	ENSG00000255293	NA	NA	NA	NA	NA	11p14.3	NA	NA	NA	NA	rs7129100	0.9	0.9	0.893	0.892372	0.8837	0.998	0.7954	0.8495	0.9192	0.89	1	0.82	0.86	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.463763	NA	NA	NA	NA	NA	0.928	NA	3.1163
1340	15	42159623	42159623	T	C	intronic	SPTBN5	NA	NA	NA	intronic	ENSG00000137877	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs8032462	0.8	0.8	0.779	0.770767	0.8837	0.9653	0.8674	0.4463	0.8241	0.89	0.96	0.87	0.43	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.45969	NA	NA	NA	NA	NA	0.732	NA	3.1163
1340	11	1156709	1156709	G	A	intergenic	MUC2,MUC5B	dist=52292;dist=87586	NA	NA	intronic	ENSG00000215182	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs34664315	0.12	0.12	0.116	0.103634	0.2008	0.003	0.0965	0.1437	0.0583	0.2	0.0035	0.12	0.14	0.1438	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.852459	NA	NA	0.206281	0.153714	NA	0.109	NA	3.1157857
1340	10	73578503	73578503	G	A	intronic	PSAP	NA	NA	NA	intronic	ENSG00000197746	NA	NA	NA	NA	NA	10q22.1	NA	NA	NA	NA	rs885828	0.42	0.42	0.399	0.40615	0.2793	0.5982	0.3689	0.4592	0.2935	0.28	0.61	0.33	0.48	0.3338	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.124166	NA	NA	0.271395	0.439174	NA	0.435	NA	3.115505
1340	2	86292656	86292656	C	T	intronic	POLR1A	NA	NA	NA	intronic	ENSG00000068654	NA	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs311563	0.78	0.78	0.784	0.78734	0.8847	0.6567	0.8674	0.7148	0.863	0.88	0.67	0.88	0.7	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.284051	1.284051	NA	NA	NA	NA	0.804	NA	3.1153
1340	10	125780958	125780958	C	T	intronic	CHST15	NA	NA	NA	intronic	ENSG00000182022	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs9422312	0.28	0.28	0.257	0.280751	0.2823	0.4127	0.353	0.1218	0.3067	0.28	0.4	0.36	0.1	0.3022	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.44819	2.44819	NA	0.300233	0.147072	ID=COSN163803;OCCURENCE=1(breast)	0.246	NA	3.115267
1341	10	11330548	11330548	G	A	intronic	CELF2	NA	NA	NA	intronic	ENSG00000048740	NA	NA	NA	NA	NA	10p14	NA	NA	NA	NA	rs2277215	0.41	0.41	0.365	0.416334	0.2773	0.623	0.4452	0.3782	0.3773	0.27	0.62	0.44	0.36	0.3519	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.091053	NA	NA	0.256141	0.354878	NA	0.239	NA	3.114659
1341	19	33597816	33597816	T	C	intronic	GPATCH1	NA	NA	NA	intronic	ENSG00000076650	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs10408093	0.44	0.44	0.465	0.533546	0.2416	0.5079	0.2867	0.8018	0.6728	0.25	0.5	0.3	0.78	0.3751	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.409552	NA	NA	0.268953	0.727417	NA	0.449	NA	3.114347
1341	7	55540791	55540791	G	C	intronic	VOPP1	NA	NA	NA	intronic	ENSG00000154978	NA	NA	NA	NA	NA	7p11.2	NA	NA	NA	NA	rs712819	0.86	0.86	0.874	0.84984	0.8857	0.7292	0.9035	0.9281	0.7935	0.89	0.74	0.9	0.92	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.201345	NA	NA	NA	NA	NA	0.891	NA	3.1143
1341	6	125598199	125598199	T	C	intronic	HDDC2	NA	NA	NA	intronic	ENSG00000111906	NA	NA	NA	NA	NA	6q22.31	NA	NA	NA	NA	rs2243392	0.48	0.48	0.526	0.503395	0.2853	0.4018	0.5173	0.9327	0.2423	0.25	0.44	0.47	0.89	0.3395	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.077914	NA	NA	0.260933	0.798881	NA	0.261	NA	3.114267
1341	16	74999617	74999617	A	C	intronic	WDR59	NA	NA	NA	intronic	ENSG00000103091	NA	NA	NA	NA	NA	16q23.1	NA	NA	NA	NA	rs4888324	0.64	0.64	0.628	0.644569	0.4414	0.756	0.5591	0.7716	0.6278	0.47	0.79	0.55	0.8	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.215439	NA	NA	0.444375	0.705202	NA	0.623	NA	3.114225
1341	16	31392189	31392189	G	C	intronic	ITGAX	NA	NA	NA	intronic	ENSG00000140678	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs11150620	0.33	0.33	0.291	0.316094	0.2913	0.5784	0.3487	0.0507	0.407	0.28	0.6	0.33	0.07	0.3104	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.419618	NA	NA	0.284302	0.089213	NA	0.304	NA	3.113998
1341	22	36710183	36710183	T	C	intronic	MYH9	NA	NA	NA	intronic	ENSG00000100345	NA	NA	NA	NA	NA	22q12.3	NA	NA	NA	NA	rs3752462	0.45	0.45	0.401	0.39357	0.6541	0.2073	0.6643	0.2141	0.3681	0.65	0.23	0.65	0.26	0.5614	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.814061	NA	NA	0.670581	0.269405	NA	0.464	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000037547.1;CLNDSDB=.;CLNDSDBID=.	3.113919
1341	7	47915651	47915651	G	C	intronic	PKD1L1	NA	NA	NA	intronic	ENSG00000136273,ENSG00000158683	NA	NA	NA	NA	NA	7p12.3	NA	NA	NA	NA	rs4724654	0.31	0.31	0.327	0.345447	0.2932	0.0962	0.3516	0.593	0.317	0.29	0.08	0.35	0.58	0.3073	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.889879	NA	NA	0.285698	0.55084	NA	0.312	NA	3.113802
1341	16	20448527	20448527	T	C	intronic	ACSM5	NA	NA	NA	intronic	ENSG00000183549	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs7499668	0.41	0.41	0.447	0.459665	0.2604	0.756	0.2622	0.5212	0.4162	0.24	0.71	0.24	0.45	0.3484	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.826626	NA	NA	0.277442	0.452792	NA	0.435	NA	3.113758
1341	7	47920450	47920450	A	G	intronic	PKD1L1	NA	NA	NA	intronic	ENSG00000136273,ENSG00000158683	NA	NA	NA	NA	NA	7p12.3	NA	NA	NA	NA	rs17131899	0.31	0.31	0.3	0.34385	0.2932	0.0952	0.3501	0.59	0.3149	0.29	0.08	0.35	0.58	0.3095	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.385382	NA	NA	0.283837	0.543123	NA	0.188	NA	3.113463
1341	17	40818584	40818584	C	T	intronic	TUBG2	NA	NA	NA	intronic	ENSG00000037042	NA	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs2292749	0.3	0.3	0.296	0.330471	0.2913	0.4474	0.2017	0.2035	0.5133	0.31	0.43	0.19	0.23	0.3034	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.340105	NA	NA	0.29186	0.207671	NA	0.391	NA	3.11344
1341	16	58537897	58537897	G	A	intronic	NDRG4	NA	NA	NA	intronic	ENSG00000103034	NA	NA	NA	NA	NA	16q21	NA	NA	NA	NA	rs2427787	0.3	0.3	0.289	0.285942	0.492	0.2411	0.2349	0.112	0.3916	0.49	0.23	0.24	0.12	0.3946	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.587739	NA	NA	NA	NA	NA	0.464	NA	3.1134
1341	8	144378868	144378868	A	G	exonic	ZNF696	NA	synonymous SNV	ZNF696:NM_030895:exon3:c.A1023G:p.R341R	exonic	ENSG00000185730	NA	synonymous SNV	ENSG00000185730:ENST00000330143:exon3:c.A1023G:p.R341R	NA	NA	8q24.3	NA	NA	NA	NA	rs7386259	0.89	0.89	0.898	0.899561	0.8608	0.8403	0.9179	0.9425	0.9294	0.85	0.87	0.91	0.95	0.8502	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.46254	NA	NA	0.842296	0.932065	NA	0.754	NA	3.1133706
1341	1	10431158	10431158	T	C	intronic	KIF1B	NA	NA	NA	intronic	ENSG00000054523	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs17411502	0.28	0.28	0.247	0.249002	0.3091	0.2817	0.3213	0.1233	0.272	0.32	0.3	0.35	0.14	0.2772	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.881645	2.881645	NA	0.300349	0.154789	ID=COSN162931;OCCURENCE=1(breast)	0.203	NA	3.113351
1341	17	12920260	12920260	A	G	intronic	ELAC2	NA	NA	NA	intronic	ENSG00000006744	NA	NA	NA	NA	NA	17p12	NA	NA	NA	NA	rs58809197	0.2	0.2	0.19	0.208466	0.3161	0.0347	0.2464	0.2073	0.2515	0.33	0.03	0.24	0.19	0.2716	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.930528	2.930528	NA	0.298953	0.220381	NA	0.203	NA	3.113347
1341	5	154311576	154311576	T	C	intronic	GEMIN5	NA	NA	NA	intronic	ENSG00000082516	NA	NA	NA	NA	NA	5q33.2	NA	NA	NA	NA	rs2544866	0.83	0.83	0.824	0.814696	0.8867	0.8919	0.7752	0.6641	0.8926	0.89	0.9	0.82	0.66	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.054266	NA	NA	NA	NA	NA	0.841	NA	3.1133
1341	8	124693641	124693641	G	A	intronic	ANXA13	NA	NA	NA	intronic	ENSG00000104537	NA	NA	NA	NA	NA	8q24.13	NA	NA	NA	NA	rs4314634	0.24	0.24	0.212	0.246006	0.2773	0.0833	0.3444	0.2806	0.2648	0.28	0.1	0.36	0.28	0.297	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.514434	NA	NA	0.312442	0.28552	NA	0.355	NA	3.113258
1341	19	12491949	12491949	T	C	intergenic	ZNF442,ZNF799	dist=15474;dist=8879	NA	NA	ncRNA_exonic	ENSG00000248406	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs11668955	0.31	0.31	0.298	0.309305	0.4364	0.0734	0.3429	0.3729	0.3119	0.45	0.07	0.39	0.34	0.451	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.053311	NA	NA	NA	NA	NA	0.326	NA	3.1126
1341	17	6545702	6545702	C	T	intronic	TXNDC17	NA	NA	NA	intronic	ENSG00000129235	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs9909640	0.36	0.36	0.336	0.334665	0.4553	0.2897	0.3285	0.2579	0.365	0.47	0.32	0.34	0.24	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.427263	NA	NA	0.432118	0.281792	NA	0.203	NA	3.112582
1341	4	89575324	89575324	T	A	intronic	HERC3	NA	NA	NA	intronic	ENSG00000138641	NA	NA	NA	NA	NA	4q22.1	NA	NA	NA	NA	rs2860427	0.49	0.49	0.524	0.547125	0.2575	0.5218	0.2853	0.8903	0.593	0.28	0.55	0.28	0.89	0.3702	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.133804	NA	NA	0.259767	0.778484	NA	0.406	NA	3.112533
1341	X	16876980	16876980	G	A	intronic	RBBP7	NA	NA	NA	intronic	ENSG00000102054	NA	NA	NA	NA	NA	Xp22.2	NA	NA	NA	NA	rs4828536	0.6	0.6	0.56916	NA	NA	NA	NA	NA	NA	0.41	0.89	0.63	0.51	0.4783	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.396837	1.396837	NA	0.409185	0.494133	NA	0.304	NA	3.112515
1341	6	47678678	47678678	C	G	intronic	GPR115	NA	NA	NA	intronic	ENSG00000153294	NA	NA	NA	NA	NA	6p12.3	NA	NA	NA	NA	rs944056	0.83	0.83	0.82	0.827676	0.8877	0.8671	0.9006	0.6868	0.864	0.87	0.87	0.9	0.69	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.245211	NA	NA	NA	NA	NA	0.797	NA	3.1123
1341	6	168475822	168475822	A	G	intronic	FRMD1	NA	NA	NA	intronic	ENSG00000153303	NA	NA	NA	NA	NA	6q27	NA	NA	NA	NA	rs3816859	0.86	0.86	0.861	0.861222	0.8877	0.8383	0.8127	0.8396	0.9213	0.89	0.87	0.79	0.87	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.709307	NA	NA	NA	NA	NA	0.906	NA	3.1123
1341	19	45506772	45506772	T	A	intronic	RELB	NA	NA	NA	intronic	ENSG00000104856	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs7251460	0.91	0.91	0.925	0.882388	0.8877	0.9435	0.8271	0.966	0.7403	0.88	0.93	0.85	0.96	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.641047	NA	NA	NA	NA	NA	0.928	NA	3.1123
1341	12	6091164	6091164	G	A	intronic	VWF	NA	NA	NA	intronic	ENSG00000110799	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs216868	0.31	0.31	0.3	0.303315	0.2535	0.4831	0.3559	0.1029	0.4029	0.26	0.51	0.35	0.12	0.3354	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.444885	1.444885	NA	0.299767	0.152065	NA	0.196	NA	3.111333
1341	7	142143562	142143562	C	A	intergenic	LOC730441,MTRNR2L6	dist=171494;dist=230569	NA	NA	downstream	ENSG00000253188	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs361457	0.26	0.26	0.217	0.242013	0.3887	0.1548	0.3718	0.1392	0.228	0.37	0.15	0.36	0.14	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.799392	NA	NA	NA	NA	NA	0.239	NA	3.1113
1341	12	124838591	124838591	C	G	intronic	NCOR2	NA	NA	NA	intronic	ENSG00000196498	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs4765555	0.35	0.35	0.315	0.356629	0.2624	0.4494	0.4582	0.3548	0.2883	0.28	0.44	0.41	0.34	0.3516	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.131479	NA	NA	0.274887	0.341917	NA	0.275	NA	3.111113
1341	20	45923539	45923539	C	T	intronic	ZMYND8	NA	NA	NA	intronic	ENSG00000101040	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs6066270	0.24	0.24	0.217	0.191094	0.3091	0.2312	0.2233	0.1188	0.1033	0.32	0.23	0.26	0.12	0.2661	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.204223	NA	NA	0.313837	0.148207	NA	0.319	NA	3.110963
1341	7	47915677	47915677	A	G	intronic	PKD1L1	NA	NA	NA	intronic	ENSG00000136273,ENSG00000158683	NA	NA	NA	NA	NA	7p12.3	NA	NA	NA	NA	rs4724655	0.31	0.31	0.317	0.345447	0.2932	0.0962	0.3516	0.593	0.317	0.29	0.08	0.35	0.58	0.31	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.8539	NA	NA	0.28593	0.550386	NA	0.297	NA	3.11087
1341	22	17662917	17662917	G	C	intronic	CECR1	NA	NA	NA	intronic	ENSG00000093072	NA	NA	NA	NA	NA	22q11.1	NA	NA	NA	NA	rs3764846	0.22	0.22	0.225	0.186302	0.3151	0.0456	0.1902	0.233	0.1329	0.32	0.04	0.24	0.24	0.251	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.031633	NA	NA	0.32314	0.231956	NA	0.167	NA	3.11076
1341	13	27256728	27256728	C	G	intronic	WASF3	NA	NA	NA	intronic	ENSG00000132970	NA	NA	NA	NA	NA	13q12.13	NA	NA	NA	NA	rs9507763	0.24	0.24	0.231	0.273363	0.3032	0.1071	0.2478	0.2874	0.4131	0.31	0.1	0.25	0.3	0.2856	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.124196	NA	NA	0.300465	0.301861	NA	0.268	NA	3.110735
1341	19	36605647	36605647	T	C	intronic	POLR2I	NA	NA	NA	intronic	ENSG00000105258	NA	NA	NA	NA	NA	19q13.12	NA	Name=HEY1,HA-E2F1,Pol2-4H8,Pol2,Pol2(phosphoS2),YY1_(C-20),TAF1	NA	NA	rs2227260	0.73	0.73	0.716	0.721246	0.6272	0.7907	0.7363	0.7912	0.6411	0.63	0.8	0.69	0.8	0.654	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.516262	1.516262	NA	0.608372	0.764185	NA	0.58	NA	3.110428
1341	4	36130127	36130127	T	C	intronic	ARAP2	NA	NA	NA	intronic	ENSG00000047365	NA	NA	NA	NA	NA	4p14	NA	NA	NA	NA	rs5009416	0.34	0.34	0.059	0.368411	0.4254	0.4841	0.3919	0.1513	0.4673	0.4	0.47	0.36	0.07	0.2439	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.002722	NA	NA	0.220349	0.054244	NA	0.13	NA	3.110351
1341	16	33605195	33605195	T	C	intergenic	RNU6-76P,LINC00273	dist=41952;dist=355857	NA	NA	upstream	ENSG00000270467	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs1985776	NA	NA	0.421	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3902	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.200672	NA	NA	NA	NA	NA	0.442	NA	3.1098
1341	2	191364708	191364708	G	A	intronic	MFSD6	NA	NA	NA	intronic	ENSG00000151690	NA	NA	NA	NA	NA	2q32.2	NA	NA	NA	NA	rs72907168	0.17	0.17	0.156	0.193291	0.3111	0.0942	0.1643	0.0461	0.3937	0.31	0.07	0.22	0.04	0.2611	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.533617	NA	NA	0.318372	0.087608	NA	0.109	NA	3.109428
1341	11	5603136	5603136	C	A	downstream	OR52B6	NA	NA	NA	ncRNA_intronic	ENSG00000239920	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs10838376	0.53	0.53	0.508	0.555112	0.33	0.753	0.5605	0.587	0.5358	0.34	0.75	0.52	0.57	0.4207	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.961266	NA	NA	0.306546	0.508588	NA	0.377	NA	3.1094206
1341	9	27609207	27609207	G	A	intergenic	C9orf72,LINGO2	dist=35343;dist=338877	NA	NA	ncRNA_exonic	ENSG00000215441	NA	NA	NA	NA	NA	9p21.2	NA	NA	NA	NA	rs813504	0.9	0.9	0.894	0.898163	0.8907	0.9276	0.8314	0.9153	0.8998	0.89	0.92	0.84	0.91	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.292854	NA	NA	NA	NA	NA	0.819	NA	3.1093
1341	16	33572148	33572148	G	A	intergenic	RNU6-76P,LINC00273	dist=8905;dist=388904	NA	NA	downstream	ENSG00000261580	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs28712624	NA	NA	0.377	0.422923	0.3907	0.3909	0.3112	0.4955	0.4703	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.920304	NA	NA	NA	NA	NA	NA	NA	3.1093
1341	16	33572149	33572149	C	A	intergenic	RNU6-76P,LINC00273	dist=8906;dist=388903	NA	NA	downstream	ENSG00000261580	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs28421760	NA	NA	0.363	0.422923	0.3907	0.3909	0.3112	0.4955	0.4703	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.771601	NA	NA	NA	NA	NA	NA	NA	3.1093
1341	19	8168326	8168326	G	A	intronic	FBN3	NA	NA	NA	intronic	ENSG00000142449	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs3865463	0.68	0.68	0.665	0.666933	0.8907	0.7272	0.6888	0.3056	0.8476	0.89	0.72	0.73	0.3	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.202696	NA	NA	NA	NA	NA	0.717	NA	3.1093
1341	7	47920298	47920298	G	C	intronic	PKD1L1	NA	NA	NA	intronic	ENSG00000136273,ENSG00000158683	NA	NA	NA	NA	NA	7p12.3	NA	NA	NA	NA	rs17131896	0.31	0.31	0.319	0.34345	0.2932	0.0952	0.3501	0.59	0.3129	0.29	0.08	0.35	0.58	0.3113	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.054219	NA	NA	0.286395	0.548343	NA	0.304	NA	3.109105
1341	1	76205643	76205643	C	A	intronic	ACADM	NA	NA	NA	intronic	ENSG00000117054	NA	NA	NA	NA	NA	1p31.1	NA	NA	NA	NA	rs12127402	0.2	0.2	0.176	0.190096	0.3052	0.0228	0.3026	0.1619	0.2025	0.28	0.02	0.32	0.2	0.2861	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.254365	NA	NA	0.299721	0.179125	NA	0.217	NA	3.108979
1341	1	22310139	22310139	T	G	intronic	CELA3B	NA	NA	NA	intronic	ENSG00000219073	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs10733031	0.84	0.84	0.767	NA	NA	NA	NA	NA	NA	0.97	0.71	0.94	0.72	0.8912	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.287951	NA	NA	NA	NA	NA	0.804	NA	3.1088
1341	17	39766504	39766504	A	G	intronic	KRT16	NA	NA	NA	intronic	ENSG00000186832	NA	NA	NA	NA	NA	17q21.2	NA	Name=CTCF	Name=10	NA	rs7406899	0.98	0.98	0.985	0.98742	0.9692	1	0.9769	0.9977	0.9867	0.96	1	0.98	1	0.9679	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.88741	NA	NA	0.954175	0.990921	NA	0.935	NA	3.108725
1341	14	105057469	105057469	G	A	intergenic	C14orf180,TMEM179	dist=1286;dist=2951	NA	NA	UTR3	ENSG00000258986	ENST00000556320:c.*312C>T	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs12101279	0.6	0.6	0.604	0.59984	0.7247	0.4018	0.4885	0.6604	0.6728	0.72	0.42	0.56	0.64	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.463169	NA	NA	NA	NA	NA	0.674	NA	3.1086334
1341	3	184010048	184010048	G	C	UTR3	ECE2	NM_014693:c.*22G>C,NM_001100121:c.*22G>C,NM_001037324:c.*22G>C,NM_001100120:c.*22G>C	NA	NA	UTR3	ENSG00000145194	ENST00000402825:c.*22G>C,ENST00000359140:c.*22G>C,ENST00000404464:c.*22G>C,ENST00000357474:c.*22G>C	NA	NA	NA	Name=Menarche (age at onset)	3q27.1	NA	NA	NA	NA	rs3914188	0.7	0.7	0.716	0.702875	0.7465	0.6349	0.7666	0.7141	0.6677	0.74	0.62	0.75	0.69	0.7302	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.696885	NA	NA	0.748023	0.73695	NA	0.768	NA	3.1086104
1341	20	59829847	59829847	C	T	intronic	CDH4	NA	NA	NA	intronic	ENSG00000179242	NA	NA	NA	NA	NA	20q13.33	NA	NA	Name=41	NA	rs3752252	0.56	0.56	0.524	0.544129	0.6431	0.5437	0.6686	0.354	0.6115	0.64	0.52	0.67	0.38	0.6062	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.123226	NA	NA	0.642326	0.401725	NA	0.543	NA	3.108374
1341	7	2623801	2623801	G	T	intronic	IQCE	NA	NA	NA	intronic	ENSG00000106012	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs73033665	0.31	0.31	0.29	0.287141	0.4404	0.1597	0.3112	0.2284	0.3231	0.46	0.15	0.31	0.25	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.022334	NA	NA	0.451288	0.253613	NA	0.355	NA	3.108312
1341	3	179533496	179533496	T	C	intronic	PEX5L	NA	NA	NA	intronic	ENSG00000114757	NA	NA	NA	NA	NA	3q26.33	NA	NA	NA	NA	rs2111397	0.93	0.93	0.928	0.94389	0.8917	0.9603	0.8862	0.9879	0.9622	0.89	0.95	0.9	0.98	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.244934	NA	NA	NA	NA	NA	0.949	NA	3.1083
1341	11	113200709	113200709	G	A	intronic	TTC12	NA	NA	NA	intronic	ENSG00000149292	NA	NA	NA	NA	NA	11q23.2	NA	NA	Name=5	NA	rs2303380	0.62	0.62	0.622	0.608826	0.6441	0.5347	0.5749	0.6815	0.5746	0.64	0.56	0.59	0.7	0.6131	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.663017	NA	NA	0.63466	0.68219	NA	0.551	NA	3.10814
1341	19	12491955	12491955	A	C	intergenic	ZNF442,ZNF799	dist=15480;dist=8873	NA	NA	ncRNA_exonic	ENSG00000248406	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs11668074	0.32	0.32	0.296	0.309305	0.4354	0.0734	0.3444	0.3729	0.3119	0.45	0.07	0.4	0.34	0.4565	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.053727	NA	NA	NA	NA	NA	0.326	NA	3.1081
1341	11	1161935	1161935	C	A	intergenic	MUC2,MUC5B	dist=57518;dist=82360	NA	NA	intronic	ENSG00000215182	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs34974357	0.13	0.13	0.113	0.107029	0.2048	0.003	0.0965	0.1543	0.0573	0.2	0.0035	0.12	0.15	0.1468	0.21	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.606296	NA	NA	0.207035	0.16476	NA	0.123	NA	3.1080317
1341	1	230883466	230883466	C	T	intronic	CAPN9	NA	NA	NA	ncRNA_intronic	ENSG00000244137	NA	NA	NA	NA	NA	1q42.2	NA	NA	NA	NA	rs12143120	0.4	0.4	0.385	0.363219	0.4314	0.3313	0.4294	0.3646	0.2771	0.45	0.33	0.45	0.38	0.3876	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.475323	NA	NA	0.406395	0.366773	NA	0.348	NA	3.1079383
1341	11	6867894	6867894	T	C	downstream	OR10A5	NA	NA	NA	UTR3	ENSG00000166363	ENST00000379831:c.*27T>C,ENST00000299454:c.*27T>C	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs7105094	0.32	0.32	0.311	0.336062	0.3052	0.4593	0.2867	0.2602	0.3783	0.31	0.41	0.27	0.27	0.31	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.736654	NA	NA	0.277052	0.27864	NA	0.326	NA	3.107748
1341	17	12905743	12905743	G	A	intronic	ELAC2	NA	NA	NA	intronic	ENSG00000006744	NA	NA	NA	NA	NA	17p12	NA	NA	NA	NA	rs55825263	0.2	0.2	0.203	0.20627	0.3151	0.0347	0.2406	0.2042	0.2495	0.33	0.03	0.23	0.18	0.2808	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.637552	NA	NA	0.296977	0.216523	NA	0.188	NA	3.107123
1341	1	150259400	150259400	A	C	UTR3	C1orf51	NM_144697:c.*34A>C	NA	NA	UTR3	ENSG00000159208	ENST00000369094:c.*34A>C,ENST00000369095:c.*34A>C,ENST00000290363:c.*34A>C	NA	NA	NA	NA	1q21.2	NA	NA	NA	NA	rs9126	0.48	0.48	0.447	0.513978	0.4056	0.7163	0.513	0.3601	0.6258	0.39	0.69	0.46	0.38	0.44	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.493091	NA	NA	0.380698	0.399001	NA	0.399	NA	3.1070354
1341	2	170558231	170558231	T	C	intronic	PHOSPHO2-KLHL23	NA	NA	NA	intronic	ENSG00000213160	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	rs11685651	0.22	0.22	0.238	0.233227	0.2883	0.1577	0.1585	0.2693	0.2587	0.28	0.15	0.17	0.27	0.3036	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.551571	NA	NA	0.30152	0.262091	NA	0.341	NA	3.10658
1341	17	2203348	2203348	T	C	exonic	SMG6	NA	synonymous SNV	SMG6:NM_017575:exon2:c.A699G:p.P233P	exonic	ENSG00000070366	NA	synonymous SNV	ENSG00000070366:ENST00000263073:exon2:c.A699G:p.P233P,ENSG00000070366:ENST00000544865:exon2:c.A606G:p.P202P	NA	NA	17p13.3	NA	NA	NA	NA	rs216194	0.92	0.92	0.903	0.94369	0.825	1	0.8963	0.9962	0.9703	0.83	1	0.89	1	0.8904	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.711792	NA	NA	0.844767	0.967998	NA	0.884	NA	3.1064996
1341	22	17662679	17662679	C	T	intronic	CECR1	NA	NA	NA	intronic	ENSG00000093072	NA	NA	NA	NA	NA	22q11.1	NA	NA	NA	NA	rs41282461	0.22	0.22	0.231	0.1873	0.3191	0.0466	0.1902	0.233	0.1329	0.32	0.05	0.24	0.24	0.2499	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.617534	NA	NA	0.324535	0.232864	NA	0.167	NA	3.106465
1341	3	169486144	169486144	A	G	intronic	ACTRT3	NA	NA	NA	intronic	ENSG00000184378	NA	NA	NA	NA	NA	3q26.2	NA	NA	NA	NA	rs9822885	0.42	0.42	0.402	0.428714	0.2644	0.6815	0.4294	0.3888	0.3906	0.27	0.69	0.36	0.39	0.3607	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.297653	NA	NA	0.268488	0.386972	NA	0.319	NA	3.106412
1341	17	40689613	40689613	G	C	intronic	NAGLU	NA	NA	NA	ncRNA_intronic	ENSG00000266929	NA	NA	NA	NA	NA	17q21.2	NA	Name=Pol2	NA	NA	rs2071046	0.75	0.75	0.776	0.720048	0.7555	0.7212	0.8199	0.7436	0.5798	0.74	0.74	0.83	0.72	0.7325	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.11012	NA	NA	0.73906	0.75783	NA	0.601	NA	3.1062733
1341	1	78578177	78578177	T	C	intronic	GIPC2	NA	NA	NA	intronic	ENSG00000137960	NA	NA	NA	NA	NA	1p31.1	NA	NA	NA	NA	rs6666954	0.45	0.45	0.475	0.448882	0.2932	0.629	0.2896	0.6536	0.2597	0.29	0.62	0.31	0.62	0.3224	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.283741	NA	NA	0.278503	0.587329	NA	0.406	NA	3.105897
1341	12	105568122	105568122	G	A	exonic	APPL2	NA	synonymous SNV	APPL2:NM_001251904:exon21:c.C1983T:p.N661N,APPL2:NM_001251905:exon21:c.C1836T:p.N612N,APPL2:NM_018171:exon21:c.C1965T:p.N655N	exonic	ENSG00000136044	NA	synonymous SNV	ENSG00000136044:ENST00000546731:exon2:c.C294T:p.N98N,ENSG00000136044:ENST00000553109:exon7:c.C558T:p.N186N,ENSG00000136044:ENST00000258530:exon21:c.C1965T:p.N655N,ENSG00000136044:ENST00000539978:exon21:c.C1836T:p.N612N,ENSG00000136044:ENST00000551662:exon21:c.C1983T:p.N661N	NA	NA	12q23.3	NA	NA	NA	NA	rs935241	0.91	0.91	0.915	0.934105	0.8499	1	0.9179	0.9327	0.9663	0.85	1	0.91	0.92	0.8815	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.526352	NA	NA	0.829419	0.926237	NA	0.964	NA	3.1058476
1341	8	139190957	139190957	T	G	intronic	FAM135B	NA	NA	NA	intronic	ENSG00000147724	NA	NA	NA	NA	NA	8q24.23	NA	Name=GATA-2	NA	NA	rs4909747	0.8	0.8	0.792	0.804513	0.6272	0.9812	0.732	0.882	0.7515	0.63	0.98	0.72	0.9	0.6782	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.717717	NA	NA	0.588784	0.843137	NA	0.732	NA	3.105816
1341	16	20487125	20487125	T	G	intronic	ACSM2A	NA	NA	NA	intronic	ENSG00000183747	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs1629314	0.46	0.46	0.449	0.48143	0.2614	0.7758	0.268	0.5545	0.4571	0.27	0.76	0.27	0.54	0.3573	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.21383	NA	NA	0.275698	0.499092	NA	0.188	NA	3.105602
1341	10	135024388	135024388	A	G	intronic	KNDC1	NA	NA	NA	intronic	ENSG00000171798	NA	NA	NA	NA	NA	10q26.3	NA	NA	NA	NA	rs2998127	0.86	0.86	0.875	0.850639	0.8946	0.7292	0.8588	0.9909	0.7352	0.88	0.74	0.85	0.98	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.420876	NA	NA	NA	NA	NA	0.906	NA	3.1054
1341	5	115426746	115426746	T	C	intronic	COMMD10	NA	NA	NA	intronic	ENSG00000145781	NA	NA	NA	Score=259;Name=lod=15	NA	5q23.1	NA	NA	NA	NA	rs10065554	0.48	0.48	0.459	0.44389	0.663	0.3859	0.5346	0.1732	0.5798	0.67	0.39	0.62	0.2	0.5842	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.403361	NA	NA	0.647484	0.255455	ID=COSN167532;OCCURENCE=1(large_intestine)	0.428	NA	3.105316
1341	12	124838774	124838774	T	A	intronic	NCOR2	NA	NA	NA	intronic	ENSG00000196498	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs3817108	0.36	0.36	0.323	0.357827	0.2624	0.4494	0.4582	0.3593	0.2883	0.28	0.44	0.41	0.34	0.3596	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.194291	NA	NA	0.272771	0.332528	NA	NA	NA	3.105229
1341	12	125833964	125833964	C	T	intronic	TMEM132B	NA	NA	NA	intronic	ENSG00000139364	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs7971264	0.26	0.26	0.243	0.271765	0.3022	0.2728	0.3458	0.1717	0.3221	0.28	0.24	0.34	0.2	0.2988	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.921501	NA	NA	0.293926	0.194373	NA	0.239	NA	3.105074
1342	3	170857240	170857240	T	C	intronic	TNIK	NA	NA	NA	intronic	ENSG00000154310	NA	NA	NA	NA	NA	3q26.2	NA	NA	NA	NA	rs6444965	0.23	0.23	0.227	0.222644	0.3002	0.0883	0.2637	0.261	0.2004	0.29	0.1	0.27	0.27	0.2761	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.017643	NA	NA	0.319113	0.269698	ID=COSN167073;OCCURENCE=1(large_intestine)	0.254	NA	3.104587
1342	4	2065373	2065373	T	G	intronic	NAT8L	NA	NA	NA	intronic	ENSG00000185818	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs454226	0.75	0.75	0.727	0.716054	0.8956	0.7044	0.8141	0.4879	0.7822	0.9	0.73	0.8	0.51	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.639339	NA	NA	NA	NA	NA	0.732	NA	3.1044
1342	11	26612870	26612870	A	G	intronic	ANO3	NA	NA	NA	intronic	ENSG00000134343	NA	NA	NA	NA	NA	11p14.2	NA	NA	NA	NA	rs294000	0.84	0.84	0.88	0.83726	0.8956	0.9554	0.8127	0.7148	0.8384	0.87	0.93	0.8	0.74	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.566275	NA	NA	NA	NA	NA	0.819	NA	3.1044
1342	21	45942111	45942111	A	G	intronic	TSPEAR	NA	NA	NA	intronic	ENSG00000175894	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs233230	0.89	0.89	0.913	0.884185	0.8956	0.9355	0.8602	0.8676	0.8589	0.89	0.94	0.85	0.89	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.074753	NA	NA	NA	NA	NA	0.906	NA	3.1044
1342	2	47277207	47277207	C	A	intronic	TTC7A	NA	NA	NA	intronic	ENSG00000068724	NA	NA	NA	NA	NA	2p21	NA	NA	NA	NA	rs3816066	0.5	0.5	0.053	0.611022	0.3936	0.748	0.5519	0.8041	0.4744	0.33	0.65	0.46	0.62	0.4654	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.129613	NA	NA	0.037209	0.166591	NA	NA	NA	3.103791
1342	2	17527078	17527078	G	A	intergenic	FAM49A,RAD51AP2	dist=679944;dist=164908	NA	NA	intergenic	ENSG00000214843,ENSG00000236348	dist=60916;dist=39280	NA	NA	NA	NA	2p24.2	NA	NA	NA	NA	rs56077500	0.12	0.12	0.117	0.148562	0.2296	0.0198	0.1009	0.0439	0.3732	0.24	0.02	0.12	0.07	NA	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.600536	NA	NA	NA	NA	NA	0.167	NA	3.1037334
1342	5	131534499	131534499	C	T	intronic	P4HA2	NA	NA	NA	intronic	ENSG00000072682	NA	NA	NA	NA	NA	5q31.1	NA	NA	NA	NA	rs3749756	0.29	0.29	0.279	0.226038	0.4493	0.1925	0.2767	0.1286	0.1268	0.44	0.22	0.33	0.12	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.733351	NA	NA	0.447203	0.192919	NA	0.268	NA	3.103497
1342	8	125072426	125072426	T	C	exonic	FER1L6	NA	synonymous SNV	FER1L6:NM_001039112:exon23:c.T2880C:p.P960P	exonic	ENSG00000214814	NA	synonymous SNV	ENSG00000214814:ENST00000399018:exon22:c.T2880C:p.P960P,ENSG00000214814:ENST00000522917:exon23:c.T2880C:p.P960P	NA	NA	8q24.13	NA	NA	NA	NA	rs4483140	0.81	0.81	0.819	0.807907	0.8718	0.6915	0.7435	0.8691	0.8252	0.86	0.72	0.76	0.87	0.8301	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.769066	NA	NA	0.86128	0.871965	NA	0.913	NA	3.1034866
1342	10	61815335	61815335	C	A	intronic	ANK3	NA	NA	NA	intronic	ENSG00000151150	NA	NA	NA	NA	NA	10q21.2	NA	NA	NA	NA	rs2393609	0.92	0.92	0.915	0.918331	0.8966	0.9107	0.9553	0.9539	0.8742	0.89	0.91	0.96	0.95	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.228955	NA	NA	NA	NA	NA	0.783	NA	3.1034
1342	17	1679793	1679793	A	G	intronic	SERPINF1	NA	NA	NA	intronic	ENSG00000132386	NA	NA	NA	NA	NA	17p13.3	NA	NA	NA	NA	rs2071021	0.29	0.29	0.252	0.295327	0.3022	0.4028	0.3516	0.1127	0.3845	0.32	0.38	0.3	0.13	0.3111	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.145975	NA	NA	0.283488	0.148661	NA	0.225	NA	3.103212
1342	22	38463652	38463652	T	G	intronic	PICK1	NA	NA	NA	ncRNA_intronic	ENSG00000233739	NA	NA	NA	NA	NA	22q13.1	NA	NA	NA	NA	rs2076369	0.71	0.71	0.701	0.72524	0.6133	0.7113	0.6326	0.9584	0.6053	0.62	0.69	0.6	0.95	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.447054	NA	NA	0.617222	0.925578	NA	0.587	NA	3.1028113
1342	22	23631823	23631823	T	C	intronic	BCR	NA	NA	NA	intronic	ENSG00000186716	NA	NA	NA	NA	NA	22q11.23	NA	NA	NA	NA	rs62219796	0.31	0.31	0.302	0.322684	0.2982	0.0754	0.3242	0.5461	0.2996	0.3	0.09	0.31	0.57	0.3055	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.590687	NA	NA	0.293605	0.507717	NA	0.297	NA	3.102695
1342	6	29230683	29230683	T	C	intergenic	OR2J2,OR14J1	dist=88332;dist=43784	NA	NA	ncRNA_exonic	ENSG00000204697	NA	NA	NA	NA	NA	6p22.1	NA	Name=CEBPB	NA	NA	rs3130827	0.51	0.51	0.472	0.514377	0.6402	0.4921	0.549	0.3071	0.6636	0.66	0.46	0.56	0.29	0.618	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.162648	NA	NA	0.639162	0.398288	NA	0.478	NA	3.102638
1342	6	167453245	167453245	T	C	intronic	FGFR1OP	NA	NA	NA	intronic	ENSG00000213066	NA	NA	NA	NA	NA	6q27	NA	NA	NA	NA	rs151604	0.92	0.92	0.914	0.940895	0.8976	0.999	0.9236	0.9198	0.9663	0.88	1	0.9	0.91	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.834327	NA	NA	NA	NA	NA	0.942	NA	3.1024
1342	11	121437571	121437571	A	G	intronic	SORL1	NA	NA	NA	intronic	ENSG00000137642	NA	NA	NA	NA	NA	11q24.1	NA	NA	NA	NA	rs1784920	0.79	0.79	0.755	0.767173	0.8976	0.7222	0.8703	0.6044	0.8262	0.89	0.72	0.89	0.63	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.027355	NA	NA	NA	NA	NA	0.804	NA	3.1024
1342	21	35276209	35276209	A	G	intronic	ATP5O	NA	NA	NA	intronic	ENSG00000241837,ENSG00000249209	NA	NA	NA	NA	NA	21q22.11	NA	NA	NA	NA	rs2834293	0.33	0.33	0.341	0.340455	0.2982	0.3601	0.2161	0.4425	0.3139	0.28	0.36	0.23	0.44	0.3034	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.623094	NA	NA	0.296395	0.387653	NA	0.341	NA	3.102005
1342	2	47277208	47277208	A	G	intronic	TTC7A	NA	NA	NA	intronic	ENSG00000068724	NA	NA	NA	NA	NA	2p21	NA	NA	NA	NA	rs3816065	0.5	0.5	0.088	0.613019	0.3936	0.75	0.5519	0.8094	0.4755	0.33	0.66	0.46	0.63	0.4677	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.063148	NA	NA	0.03686	0.187245	NA	NA	NA	3.10184
1342	22	39148483	39148483	G	A	intronic	SUN2	NA	NA	NA	intronic	ENSG00000100242	NA	NA	NA	NA	NA	22q13.1	NA	NA	NA	NA	rs2072798	0.34	0.34	0.338	0.304513	0.2962	0.4544	0.196	0.267	0.2863	0.31	0.49	0.22	0.3	0.3042	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.336112	NA	NA	0.297791	0.267136	NA	0.297	NA	3.101809
1342	1	156304782	156304782	A	G	intronic	CCT3	NA	NA	NA	intronic	ENSG00000163468	NA	NA	NA	NA	NA	1q22	NA	NA	NA	NA	rs3762281	0.44	0.44	0.374	0.457069	0.4642	0.4742	0.6427	0.2897	0.5266	0.46	0.46	0.6	0.28	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.060609	NA	NA	0.434004	0.230491	NA	0.384	NA	3.101796
1342	19	53409113	53409113	T	C	intergenic	ZNF320,ZNF816-ZNF321P	dist=14514;dist=21275	NA	NA	intergenic	ENSG00000182986,ENSG00000213793	dist=8167;dist=9336	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs28382387	0.37	0.37	0.367	0.409145	0.2316	0.2778	0.4986	0.7322	0.227	0.22	0.28	0.41	0.68	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.040136	NA	NA	NA	NA	NA	0.471	NA	3.1017334
1342	19	53409135	53409135	C	T	intergenic	ZNF320,ZNF816-ZNF321P	dist=14536;dist=21253	NA	NA	intergenic	ENSG00000182986,ENSG00000213793	dist=8189;dist=9314	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs28644464	0.38	0.38	0.399	0.409145	0.2316	0.2778	0.4986	0.7322	0.227	0.22	0.29	0.41	0.69	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.826334	NA	NA	NA	NA	NA	0.464	NA	3.1017334
1342	19	53410373	53410373	A	G	intergenic	ZNF320,ZNF816-ZNF321P	dist=15774;dist=20015	NA	NA	intergenic	ENSG00000182986,ENSG00000213793	dist=9427;dist=8076	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs2870128	0.39	0.39	0.396	0.409345	0.2316	0.2778	0.4986	0.733	0.227	0.24	0.29	0.43	0.73	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.70562	NA	NA	NA	NA	NA	0.471	NA	3.1017334
1342	19	53410828	53410828	T	C	intergenic	ZNF320,ZNF816-ZNF321P	dist=16229;dist=19560	NA	NA	intergenic	ENSG00000182986,ENSG00000213793	dist=9882;dist=7621	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs6509702	0.39	0.39	0.395	0.406949	0.2316	0.2778	0.4971	0.7247	0.227	0.24	0.29	0.43	0.73	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.598887	NA	NA	NA	NA	NA	0.471	NA	3.1017334
1342	19	53411166	53411166	A	C	intergenic	ZNF320,ZNF816-ZNF321P	dist=16567;dist=19222	NA	NA	intergenic	ENSG00000182986,ENSG00000213793	dist=10220;dist=7283	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs7255668	0.38	0.38	0.388	0.425319	0.2316	0.2778	0.5	0.792	0.228	0.22	0.28	0.4	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.328961	NA	NA	NA	NA	NA	0.486	NA	3.1017334
1342	19	53411347	53411347	C	A	intergenic	ZNF320,ZNF816-ZNF321P	dist=16748;dist=19041	NA	NA	intergenic	ENSG00000182986,ENSG00000213793	dist=10401;dist=7102	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs7256037	0.39	0.39	0.408	0.403954	0.2316	0.2778	0.4769	0.7239	0.227	0.24	0.29	0.42	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.736597	NA	NA	NA	NA	NA	0.471	NA	3.1017334
1342	4	78873629	78873629	G	A	intronic	MRPL1	NA	NA	NA	intronic	ENSG00000169288	NA	NA	NA	NA	NA	4q21.1	NA	NA	NA	NA	rs17002849	0.31	0.31	0.286	0.29353	0.2952	0.4702	0.2853	0.1664	0.2873	0.32	0.44	0.28	0.16	0.3072	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.283822	NA	NA	0.296047	0.200862	NA	0.275	NA	3.101553
1342	6	53160383	53160383	G	T	intronic	ELOVL5	NA	NA	NA	intronic	ENSG00000012660	NA	NA	NA	NA	NA	6p12.1	NA	NA	NA	NA	rs3736732	0.56	0.56	0.559	0.590855	0.4523	0.4296	0.5591	0.9418	0.4479	0.45	0.4	0.56	0.92	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.374568	NA	NA	0.44626	0.854769	NA	0.543	NA	3.10144
1342	19	14857179	14857179	T	C	intronic	EMR2	NA	NA	NA	intronic	ENSG00000127507	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs1029476	0.44	0.44	0.412	0.495008	0.2654	0.5228	0.3833	0.6528	0.5685	0.29	0.52	0.35	0.64	0.3573	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.138591	NA	NA	0.275878	0.601226	NA	0.377	NA	3.101422
1342	6	29976838	29976838	A	G	ncRNA_exonic	HLA-J	NA	NA	NA	ncRNA_exonic	ENSG00000204622,ENSG00000204623	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs2275854	0.77	0.77	0.748	0.757388	0.7843	0.7917	0.7896	0.6755	0.7822	0.79	0.82	0.78	0.69	0.781	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.764029	NA	0	NA	NA	NA	0.71	NA	3.1013666
1342	1	226016381	226016381	G	A	intronic	EPHX1	NA	NA	NA	intronic	ENSG00000143819	NA	NA	NA	NA	NA	1q42.12	NA	NA	NA	NA	rs41266229	0.26	0.26	0.255	0.228634	0.325	0.1617	0.2651	0.2133	0.1933	0.34	0.2	0.25	0.21	0.2727	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.842062	NA	NA	0.301025	0.232727	NA	0.188	NA	3.101275
1342	12	29496224	29496224	G	A	intronic	ERGIC2	NA	NA	NA	intronic	ENSG00000087502	NA	NA	NA	NA	NA	12p11.22	NA	NA	NA	NA	rs3782511	0.28	0.28	0.267	0.289936	0.2962	0.3839	0.2248	0.2247	0.3211	0.3	0.33	0.22	0.22	0.2898	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.274879	NA	NA	0.313155	0.22614	NA	0.312	NA	3.100845
1342	7	23808604	23808604	C	A	intronic	STK31	NA	NA	NA	intronic	ENSG00000196335	NA	NA	NA	NA	NA	7p15.3	NA	NA	NA	NA	rs61564984	0.27	0.27	0.237	0.279752	0.3161	0.3998	0.1816	0.1589	0.3517	0.3	0.36	0.19	0.14	0.2973	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.721795	NA	NA	0.286878	0.180436	ID=COSM150251;OCCURENCE=1(stomach)	0.181	NA	3.099722
1342	3	126218167	126218167	G	A	intronic	UROC1	NA	NA	NA	intronic	ENSG00000159650	NA	NA	NA	NA	NA	3q21.3	NA	NA	NA	NA	rs1168595	0.27	0.27	0.273	0.233227	0.3042	0.2738	0.3228	0.1498	0.1677	0.3	0.27	0.34	0.17	0.298	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.295827	NA	NA	0.298278	0.172265	NA	0.261	NA	3.099522
1342	1	26524706	26524706	A	G	intronic	CATSPER4	NA	NA	NA	intronic	ENSG00000188782	NA	NA	NA	NA	NA	1p36.11	NA	NA	NA	NA	rs9970046	0.71	0.71	0.733	0.672524	0.9006	0.4216	0.6628	0.8154	0.5102	0.91	0.41	0.7	0.78	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.948088	NA	NA	NA	NA	NA	0.739	NA	3.0994
1342	15	38631840	38631840	T	C	intronic	SPRED1	NA	NA	NA	intronic	ENSG00000166068	NA	NA	NA	NA	NA	15q14	NA	NA	NA	NA	rs7163339	0.82	0.82	0.818	0.799321	0.9006	0.8026	0.8401	0.649	0.8661	0.92	0.8	0.82	0.71	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.246622	NA	NA	NA	NA	NA	0.848	NA	3.0994
1342	8	26265907	26265907	A	G	intronic	BNIP3L	NA	NA	NA	intronic	ENSG00000104765	NA	NA	NA	NA	NA	8p21.2	NA	NA	NA	NA	rs9644114	0.2	0.2	0.176	0.197085	0.3191	0.1746	0.1931	0.0514	0.2945	0.33	0.16	0.18	0.06	0.2671	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.814619	NA	NA	0.314651	0.090785	ID=COSN168293;OCCURENCE=1(large_intestine)	0.08	NA	3.099149
1342	7	100865847	100865847	T	C	intronic	ZNHIT1	NA	NA	NA	intronic	ENSG00000106400	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs10953329	0.35	0.35	0.353	0.386581	0.3052	0.2639	0.268	0.5825	0.4162	0.29	0.26	0.3	0.58	0.3091	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.124297	NA	NA	0.287311	0.508652	NA	0.464	NA	3.098389
1342	18	9775372	9775372	A	G	intronic	RAB31	NA	NA	NA	intronic	ENSG00000168461	NA	NA	NA	NA	NA	18p11.22	NA	NA	Name=32	NA	rs6506697	0.68	0.68	0.683	0.696885	0.6173	0.6647	0.7118	0.8487	0.5961	0.62	0.65	0.7	0.81	0.6628	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.25666	NA	NA	0.621596	0.8125	NA	0.652	NA	3.098304
1342	10	135105983	135105983	C	T	intronic	TUBGCP2	NA	NA	NA	intronic	ENSG00000130640	NA	NA	NA	NA	NA	10q26.3	NA	NA	NA	NA	rs2864768	0.4	0.4	NA	0.365216	0.4523	0.5238	0.4712	0.0688	0.4376	0.46	0.58	0.45	0.07	0.4496	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.140465	NA	NA	NA	NA	NA	NA	NA	3.0981
1342	19	46191828	46191828	C	T	intronic	SNRPD2	NA	NA	NA	intronic	ENSG00000125743	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs10403723	0.27	0.27	0.23	0.269968	0.3052	0.2341	0.428	0.1339	0.3425	0.3	0.22	0.42	0.16	0.2981	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.411573	1.411573	NA	0.298721	0.156605	NA	0.196	NA	3.097979
1342	20	44523782	44523782	C	T	intronic	CTSA	NA	NA	NA	intronic	ENSG00000064601	NA	NA	NA	NA	NA	20q13.12	NA	Name=Pol2-4H8	NA	NA	rs4608591	0.66	0.66	0.664	0.679912	0.6233	0.7073	0.7478	0.6596	0.6892	0.65	0.69	0.7	0.62	0.6608	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.383099	NA	NA	0.618023	0.672946	NA	0.667	NA	3.097877
1342	11	125479496	125479496	C	T	intronic	STT3A	NA	NA	NA	intronic	ENSG00000134910	NA	NA	NA	NA	NA	11q24.2	NA	NA	NA	NA	rs2241501	0.3	0.3	0.3	0.308307	0.3062	0.4028	0.2133	0.2526	0.3558	0.3	0.36	0.25	0.28	0.2963	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.38901	2.38901	NA	0.299837	0.270332	NA	0.297	NA	3.097663
1342	19	960187	960187	G	C	intronic	ARID3A	NA	NA	NA	intronic	ENSG00000116017	NA	NA	NA	NA	NA	19p13.3	NA	Name=CTCF,Rad21,CTCF_(SC-5916)	Name=11	NA	rs1637993	0.94	0.94	0.934	0.932508	0.9742	0.9891	0.9092	0.8623	0.9427	0.97	1	0.91	0.85	0.9529	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.277129	NA	NA	0.975349	0.888788	NA	0.949	NA	3.097551
1342	1	119927680	119927680	A	G	intronic	HAO2	NA	NA	NA	intronic	ENSG00000116882	NA	NA	NA	Score=304;Name=lod=23	NA	1p12	NA	NA	NA	NA	rs6667679	0.67	0.67	0.662	0.667532	0.6203	0.6726	0.7291	0.7042	0.6176	0.61	0.71	0.7	0.68	0.6586	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.782274	NA	NA	0.623721	0.68906	NA	0.71	NA	3.097379
1342	19	9007748	9007748	A	G	intronic	MUC16	NA	NA	NA	intronic	ENSG00000181143	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs11673136	0.42	0.42	0.392	0.440895	0.4344	0.4613	0.5187	0.2874	0.5787	0.42	0.48	0.54	0.26	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.227136	NA	NA	0.468259	0.315029	NA	0.377	NA	3.097341
1342	20	44522594	44522594	A	G	intronic	CTSA	NA	NA	NA	intronic	ENSG00000064601	NA	NA	NA	NA	NA	20q13.12	NA	NA	Name=10	NA	rs4810476	0.66	0.66	0.633	0.680112	0.6233	0.7063	0.7478	0.6611	0.6892	0.65	0.69	0.7	0.62	0.661	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.194974	NA	NA	0.618372	0.674081	NA	0.667	NA	3.097328
1342	14	96852071	96852071	T	C	UTR3	GSKIP	NM_016472:c.*50T>C,NM_001271906:c.*50T>C,NM_001271905:c.*50T>C,NM_001271904:c.*50T>C	NA	NA	UTR3	ENSG00000100744	ENST00000555181:c.*50T>C,ENST00000554182:c.*50T>C,ENST00000556095:c.*50T>C,ENST00000438650:c.*50T>C	NA	NA	NA	NA	14q32.2	NA	NA	NA	NA	rs1545280	0.3	0.3	0.262	0.258586	0.4274	0.1766	0.4625	0.1157	0.2178	0.44	0.2	0.45	0.1	0.3714	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.024063	NA	NA	0.437311	0.179382	NA	0.312	NA	3.0972224
1342	19	51919507	51919507	T	C	intronic	LOC100129083,SIGLEC10	NA	NA	NA	ncRNA_intronic	ENSG00000255441	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs62114257	0.24	0.24	0.209	0.266773	0.4433	0.0883	0.3689	0.0499	0.4898	0.41	0.08	0.38	0.05	0.3689	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.527945	2.527945	NA	0.423947	0.104769	NA	0.297	NA	3.0971863
1342	19	58001512	58001512	T	A	intronic	ZNF419	NA	NA	NA	UTR5	ENSG00000105136	ENST00000519310:c.-1420T>A	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs11672136	0.42	0.42	0.388	0.437101	0.3201	0.5784	0.4669	0.3154	0.5552	0.34	0.63	0.39	0.32	0.4092	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.290487	NA	NA	0.340225	0.303082	NA	0.348	NA	3.0971417
1342	14	23866713	23866713	A	G	intronic	MYH6	NA	NA	NA	intronic	ENSG00000197616	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs412768	0.3	0.3	0.309	0.30651	0.2883	0.1607	0.2493	0.4743	0.2894	0.3	0.16	0.3	0.49	0.2965	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.885079	NA	NA	0.318721	0.472991	ID=COSN164637;OCCURENCE=1(NS)	0.377	NA	3.096479
1342	16	69395434	69395434	A	G	intronic	TERF2	NA	NA	NA	intronic	ENSG00000132604	NA	NA	NA	NA	NA	16q22.1	NA	NA	NA	NA	rs251796	0.26	0.26	0.227	0.241613	0.3022	0.3313	0.3343	0.0295	0.3078	0.31	0.34	0.32	0.04	0.3039	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.911927	NA	NA	0.297558	0.073703	NA	0.138	NA	3.096342
1342	17	8784361	8784361	A	G	intronic	PIK3R5	NA	NA	NA	intronic	ENSG00000141506	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs4791765	0.24	0.24	0.232	0.222244	0.3052	0.002	0.2997	0.3472	0.1401	0.3	0.0017	0.27	0.39	0.2684	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.316502	NA	NA	0.330233	0.338856	NA	0.203	NA	3.096167
1342	2	24398446	24398446	A	T	intronic	FAM228A	NA	NA	NA	intronic	ENSG00000186453,ENSG00000266118	NA	NA	NA	NA	NA	2p23.3	Score=811;Name=V$EVI1_03	NA	NA	NA	rs2042468	0.63	0.63	0.602	0.622005	0.6173	0.7768	0.7752	0.4425	0.6012	0.61	0.78	0.75	0.42	0.6432	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.90523	1.90523	NA	0.64357	0.448969	ID=COSM148810;OCCURENCE=1(stomach)	0.645	NA	3.09593
1342	1	226016397	226016397	G	A	intronic	EPHX1	NA	NA	NA	intronic	ENSG00000143819	NA	NA	NA	NA	NA	1q42.12	NA	NA	NA	NA	rs41266231	0.27	0.27	0.273	0.246206	0.325	0.1627	0.2709	0.2769	0.1922	0.34	0.2	0.25	0.26	0.2775	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.051924	NA	NA	0.301702	0.273761	NA	0.21	NA	3.095798
1342	20	257803	257803	G	C	intronic	C20orf96	NA	NA	NA	intronic	ENSG00000196476	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs6075583	0.25	0.25	0.226	0.195487	0.3012	0.3452	0.2089	0.0136	0.1687	0.32	0.37	0.2	0.02	0.2773	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.499144	NA	NA	0.325814	0.064231	NA	0.152	NA	3.095686
1342	8	61818964	61818964	T	C	intergenic	CHD7,LOC100130298	dist=38378;dist=59716	NA	NA	ncRNA_exonic	ENSG00000271377	NA	NA	NA	NA	NA	8q12.2	NA	NA	NA	NA	rs4738844	0.88	0.88	0.853	0.88778	0.9046	0.9246	0.9366	0.7466	0.9888	0.9	0.94	0.94	0.74	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.830161	NA	NA	NA	NA	NA	0.783	NA	3.0954
1342	10	115373851	115373851	T	C	intronic	NRAP	NA	NA	NA	intronic	ENSG00000197893	NA	NA	NA	NA	NA	10q25.3	NA	NA	NA	NA	rs2419850	0.89	0.89	0.88	0.880391	0.9046	0.8958	0.9236	0.8041	0.9121	0.9	0.91	0.91	0.83	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.675597	NA	NA	NA	NA	NA	0.92	NA	3.0954
1342	2	232390151	232390151	A	G	intronic	NMUR1	NA	NA	NA	intronic	ENSG00000171596	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs3752763	0.33	0.33	0.305	0.34984	0.2763	0.5099	0.4207	0.1513	0.4785	0.28	0.49	0.41	0.18	0.3488	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.344031	NA	NA	0.279665	0.153794	NA	0.319	NA	3.095235
1342	8	59547804	59547804	C	A	intronic	NSMAF	NA	NA	NA	intronic	ENSG00000035681	NA	NA	NA	NA	NA	8q12.1	NA	NA	NA	NA	rs10113830	0.25	0.25	0.229	0.242212	0.33	0.3423	0.1744	0.093	0.2986	0.32	0.29	0.22	0.11	0.2752	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.858898	NA	NA	0.299651	0.118702	NA	0.203	NA	3.095149
1343	3	149093238	149093238	A	G	exonic	TM4SF1	NA	synonymous SNV	TM4SF1:NM_014220:exon3:c.T405C:p.T135T	exonic	ENSG00000169908	NA	synonymous SNV	ENSG00000169908:ENST00000472441:exon1:c.T138C:p.T46T,ENSG00000169908:ENST00000305366:exon3:c.T405C:p.T135T	NA	NA	3q25.1	NA	NA	NA	NA	rs4771	0.89	0.89	0.883	0.89357	0.837	0.8641	0.9193	0.9629	0.8701	0.84	0.88	0.91	0.95	0.8778	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.534798	2.534798	NA	0.857209	0.950295	NA	0.855	NA	3.0946576
1343	3	124732842	124732842	C	A	intronic	HEG1	NA	NA	NA	intronic	ENSG00000173706	NA	NA	NA	NA	NA	3q21.2	Score=747;Name=V$MEF2_04	NA	NA	NA	rs6438871	0.72	0.72	0.703	0.73742	0.6223	0.9286	0.7262	0.6339	0.8067	0.65	0.92	0.67	0.63	0.6869	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.853243	NA	NA	0.596187	0.633952	NA	0.58	NA	3.094613
1343	22	37611951	37611951	C	G	intergenic	SSTR3,RAC2	dist=3598;dist=9359	NA	NA	upstream	ENSG00000226233	NA	NA	NA	NA	NA	22q13.1	NA	NA	NA	NA	rs5756563	0.25	0.25	0.235	0.214257	0.4056	0.0923	0.2349	0.1581	0.2045	0.39	0.1	0.28	0.17	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.7246	NA	NA	NA	NA	NA	0.268	NA	3.0944
1343	2	231333852	231333852	A	C	intronic	SP100	NA	NA	NA	intronic	ENSG00000067066	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs1649874	0.18	0.18	0.188	0.182508	0.3221	0.0635	0.1729	0.0794	0.3078	0.31	0.06	0.19	0.11	0.2627	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.289049	NA	NA	0.321271	0.110304	NA	0.138	NA	3.093929
1343	2	231333834	231333834	G	A	intronic	SP100	NA	NA	NA	intronic	ENSG00000067066	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs1649873	0.18	0.18	0.187	0.182508	0.3221	0.0635	0.1729	0.0794	0.3078	0.31	0.06	0.19	0.11	0.2631	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.42462	1.42462	NA	0.321503	0.110531	NA	0.13	NA	3.093297
1343	15	99670989	99670989	T	C	exonic	SYNM	NA	unknown	UNKNOWN	exonic	ENSG00000182253	NA	synonymous SNV	ENSG00000182253:ENST00000560674:exon4:c.T1566C:p.P522P,ENSG00000182253:ENST00000328642:exon5:c.T2421C:p.P807P,ENSG00000182253:ENST00000336292:exon5:c.T2421C:p.P807P	NA	NA	15q26.3	NA	NA	NA	NA	rs3743248	0.78	0.78	0.797	0.792732	0.7525	0.7103	0.7493	0.9554	0.7301	0.74	0.73	0.75	0.93	0.7512	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.825433	NA	NA	0.736469	0.928199	NA	0.645	NA	3.0931643
1343	16	85106500	85106500	C	G	intronic	KIAA0513	NA	NA	NA	intronic	ENSG00000135709	NA	NA	NA	NA	NA	16q24.1	NA	NA	NA	NA	rs7184546	0.2	0.2	0.192	0.218251	0.2922	0.0804	0.2767	0.202	0.2648	0.29	0.07	0.28	0.16	0.2859	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.366989	NA	NA	0.328837	0.244202	NA	0.188	NA	3.093063
1343	4	2955192	2955192	C	G	intronic	NOP14	NA	NA	NA	ncRNA_intronic	ENSG00000249673	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs1475976	0.42	0.42	0.411	0.401957	0.4304	0.1875	0.4107	0.6815	0.2096	0.44	0.18	0.42	0.67	0.3965	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.586105	NA	NA	0.413488	0.623695	NA	0.341	NA	3.0929453
1343	6	151130920	151130920	A	G	intronic	PLEKHG1	NA	NA	NA	intronic	ENSG00000120278	NA	NA	NA	NA	NA	6q25.1	NA	NA	NA	NA	rs712215	0.26	0.26	0.232	0.211262	0.33	0.1806	0.1974	0.2035	0.1411	0.33	0.21	0.22	0.22	0.2629	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.795158	NA	NA	0.314302	0.211076	NA	0.246	NA	3.092798
1343	13	107209378	107209378	T	C	intronic	ARGLU1	NA	NA	NA	intronic	ENSG00000134884	NA	NA	NA	NA	NA	13q33.3	NA	NA	NA	NA	rs9587157	0.31	0.31	0.301	0.347244	0.3062	0.1746	0.3372	0.5061	0.3599	0.31	0.14	0.37	0.47	0.3209	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.148286	NA	NA	0.280249	0.467385	ID=COSN164548;OCCURENCE=1(breast)	0.319	NA	3.092651
1343	2	128610719	128610719	T	C	intronic	POLR2D	NA	NA	NA	intronic	ENSG00000144231	NA	NA	NA	NA	NA	2q14.3	NA	NA	NA	NA	rs35614229	0.23	0.23	0.201	0.272364	0.3082	0.1776	0.2695	0.1104	0.5542	0.31	0.2	0.26	0.11	0.3016	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.818785	1.818785	NA	0.297558	0.144576	NA	0.246	NA	3.092642
1343	3	131415340	131415340	C	T	intronic	CPNE4	NA	NA	NA	intronic	ENSG00000196353	NA	NA	NA	NA	NA	3q22.1	NA	NA	NA	NA	rs2369134	0.25	0.25	0.258	0.242812	0.3052	0.1181	0.2464	0.2746	0.2618	0.3	0.12	0.25	0.31	0.2834	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.826139	NA	NA	0.318837	0.282342	NA	0.341	NA	3.092563
1343	4	36179343	36179343	T	C	intronic	ARAP2	NA	NA	NA	intronic	ENSG00000047365	NA	NA	NA	NA	NA	4p14	NA	NA	NA	NA	rs4832797	0.93	0.93	0.924	0.928714	0.9076	1	0.9496	0.8517	0.9663	0.91	1	0.94	0.86	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.00108	NA	NA	NA	NA	NA	0.87	NA	3.0924
1343	10	71655443	71655443	G	A	intronic	COL13A1	NA	NA	NA	intronic	ENSG00000197467	NA	NA	NA	NA	NA	10q22.1	NA	NA	NA	NA	rs1227744	0.93	0.93	0.94	0.927316	0.9076	0.9891	0.8919	0.9175	0.9223	0.9	1	0.91	0.92	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.740603	NA	NA	NA	NA	NA	0.891	NA	3.0924
1343	6	31113083	31113083	G	A	intronic	CCHCR1	NA	NA	NA	intronic	ENSG00000204536	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs1265076	0.24	0.24	0.223	0.220248	0.3141	0.0724	0.2752	0.2216	0.2352	0.33	0.09	0.29	0.24	0.2759	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.275255	NA	NA	0.317645	0.245202	NA	0.225	NA	3.092355
1343	10	5998285	5998285	G	A	intronic	IL15RA	NA	NA	NA	intronic	ENSG00000134470	NA	NA	NA	NA	NA	10p15.1	NA	NA	NA	NA	rs3136627	0.44	0.44	0.445	0.446486	0.4304	0.3115	0.4107	0.5711	0.4591	0.42	0.3	0.47	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.461432	NA	NA	0.477373	0.565751	NA	0.362	NA	3.092227
1343	6	31118942	31118942	T	C	intronic	CCHCR1	NA	NA	NA	intronic	ENSG00000204536	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs2517985	0.24	0.24	0.231	0.220248	0.3141	0.0724	0.2752	0.2216	0.2352	0.33	0.09	0.29	0.24	0.2771	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.649966	1.649966	NA	0.316839	0.244371	NA	0.239	NA	3.091961
1343	19	3434413	3434413	C	G	intronic	NFIC	NA	NA	NA	intronic	ENSG00000141905	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs2302220	0.4	0.4	0.331	0.386981	0.2744	0.7242	0.5187	0.1346	0.4029	0.28	0.71	0.48	0.14	0.3517	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.794079	NA	NA	0.282093	0.170903	NA	0.203	NA	3.091807
1343	17	8138643	8138643	A	C	intronic	CTC1	NA	NA	NA	intronic	ENSG00000178971	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs12603646	0.32	0.32	0.282	0.285743	0.2992	0.3313	0.4798	0.1815	0.228	0.3	0.4	0.43	0.17	0.3117	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.367431	NA	NA	0.297339	0.181206	NA	0.232	NA	3.091761
1343	6	31116142	31116142	G	A	intronic	CCHCR1	NA	NA	NA	intronic	ENSG00000204536	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs1265067	0.24	0.24	0.237	0.220048	0.3141	0.0724	0.2752	0.2224	0.2331	0.33	0.09	0.29	0.24	0.2765	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.25858	NA	NA	0.317829	0.245364	NA	0.254	NA	3.091571
1343	2	208546867	208546867	C	A	intergenic	METTL21A,CCNYL1	dist=56894;dist=29397	NA	NA	downstream	ENSG00000213082	NA	NA	NA	NA	NA	2q33.3	NA	NA	NA	NA	rs2010240	0.54	0.54	0.478	0.576278	0.4085	0.6696	0.4712	0.7231	0.5286	0.4	0.65	0.48	0.7	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.576658	NA	NA	NA	NA	NA	0.457	NA	3.0915
1343	14	90754538	90754538	C	T	intronic	NRDE2	NA	NA	NA	intronic	ENSG00000119720	NA	NA	NA	NA	NA	14q32.11	NA	NA	NA	NA	rs17799226	0.24	0.24	0.215	0.228035	0.328	0.1994	0.3098	0.1021	0.2669	0.32	0.2	0.3	0.1	0.2811	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.604592	NA	NA	0.300116	0.134589	NA	0.21	NA	3.090784
1343	10	96068480	96068480	A	G	intronic	PLCE1	NA	NA	NA	intronic	ENSG00000138193	NA	NA	NA	NA	NA	10q23.33	NA	NA	NA	NA	rs11187850	0.23	0.23	0.239	0.236422	0.335	0.2292	0.196	0.1831	0.2434	0.32	0.18	0.21	0.16	0.2656	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.813505	1.813505	NA	0.308827	0.199139	NA	0.174	NA	3.090573
1343	7	131195535	131195535	G	T	intronic	PODXL	NA	NA	NA	intronic	ENSG00000128567	NA	NA	NA	NA	NA	7q32.3	NA	NA	NA	NA	rs3847113	0.46	0.46	NA	0.452875	0.4364	0.6538	0.4265	0.3533	0.4162	0.46	0.62	0.39	0.35	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.931593	NA	NA	0.473129	0.36758	NA	0.493	NA	3.090471
1343	5	169806001	169806001	T	C	intronic	KCNIP1,KCNMB1	NA	NA	NA	intronic	ENSG00000145936,ENSG00000182132	NA	NA	NA	NA	NA	5q35.1	NA	NA	NA	NA	rs314157	0.37	0.37	0.343	0.408546	0.2843	0.373	0.3372	0.5212	0.4714	0.27	0.39	0.34	0.53	0.3349	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.44915	NA	NA	0.290581	0.481843	NA	0.261	NA	3.090219
1343	21	46932328	46932328	G	A	UTR3	COL18A1	NM_130445:c.*16G>A,NM_030582:c.*16G>A	NA	NA	UTR3	ENSG00000182871	ENST00000400337:c.*16G>A,ENST00000355480:c.*16G>A,ENST00000359759:c.*16G>A,ENST00000342220:c.*16G>A	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs7499	0.47	0.47	0.478	0.467252	0.3996	0.5863	0.4107	0.4766	0.4417	0.4	0.59	0.41	0.48	0.4461	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.373146	NA	NA	0.397439	0.414399	NA	0.406	NA	3.0901944
1343	15	90334345	90334345	C	G	intronic	ANPEP	NA	NA	NA	intronic	ENSG00000166825	NA	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs7168329	0.28	0.28	0.28	0.309105	0.2952	0.2341	0.245	0.3669	0.3681	0.29	0.25	0.24	0.33	0.2971	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.377694	NA	NA	0.317865	0.345909	NA	0.413	NA	3.089835
1343	17	15811808	15811808	T	C	intergenic	MEIS3P1,ADORA2B	dist=118789;dist=36423	NA	NA	intergenic	ENSG00000227790,ENSG00000170425	dist=44341;dist=36423	NA	NA	NA	NA	17p12	NA	NA	NA	NA	rs859247	0.26	0.26	0.248	0.253395	0.2435	0.1657	0.2478	0.3737	0.1953	0.24	0.17	0.25	0.41	NA	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.263409	NA	NA	NA	NA	NA	0.254	NA	3.0898334
1343	15	90333654	90333654	A	T	intronic	ANPEP	NA	NA	NA	intronic	ENSG00000166825	NA	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs8192298	0.28	0.28	0.281	0.309105	0.2962	0.2341	0.245	0.3661	0.3681	0.29	0.25	0.24	0.33	0.2965	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.213994	NA	NA	0.317748	0.345909	NA	0.348	NA	3.089552
1343	7	142468189	142468189	C	G	intergenic	PRSS1,PRSS3P2	dist=7262;dist=10568	NA	NA	upstream	ENSG00000250591	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs1969595	0.54	0.54	0.5	0.609425	0.4105	0.7669	0.4697	0.6679	0.6718	0.4	0.74	0.46	0.58	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.304736	NA	NA	NA	NA	NA	0.522	NA	3.0895
1343	12	351711	351711	T	G	intronic	SLC6A13	NA	NA	NA	intronic	ENSG00000010379	NA	NA	NA	NA	NA	12p13.33	NA	NA	NA	NA	rs525797	0.79	0.79	0.801	0.75	0.9105	0.6548	0.7032	0.7806	0.6748	0.91	0.66	0.75	0.8	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.000895	NA	NA	NA	NA	NA	0.841	NA	3.0895
1343	18	30672631	30672631	G	A	intronic	CCDC178	NA	NA	NA	intronic	ENSG00000166960	NA	NA	NA	NA	NA	18q12.1	NA	NA	NA	NA	rs1995096	0.78	0.78	0.751	0.761781	0.9105	0.9048	0.8804	0.3351	0.954	0.92	0.9	0.88	0.33	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.112327	NA	NA	NA	NA	NA	0.797	NA	3.0895
1343	10	49790972	49790972	C	T	intronic	ARHGAP22	NA	NA	NA	intronic	ENSG00000128805	NA	NA	NA	NA	NA	10q11.22	NA	NA	NA	NA	rs2289808	0.4	0.4	0.378	0.421526	0.2773	0.7272	0.451	0.2216	0.5041	0.27	0.77	0.4	0.18	0.3661	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.517774	NA	NA	0.267442	0.24739	NA	0.312	NA	3.089158
1343	1	159684186	159684186	T	A	intronic	CRP	NA	NA	NA	intronic	ENSG00000132693	NA	NA	NA	NA	NA	1q23.2	NA	NA	NA	NA	rs1417938	0.2	0.2	0.182	0.192093	0.326	0.0556	0.3228	0.0847	0.2474	0.32	0.06	0.35	0.08	0.2781	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.33198	NA	NA	0.30686	0.127099	NA	0.181	NA	3.08904
1343	1	196920178	196920178	C	T	intronic	CFHR2	NA	NA	NA	intronic	ENSG00000080910	NA	NA	NA	NA	NA	1q31.3	NA	NA	NA	NA	rs3828032	0.3	0.3	0.306	0.320887	0.3111	0.1706	0.2392	0.4675	0.3456	0.31	0.17	0.28	0.45	0.2912	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.703015	NA	NA	0.308721	0.416704	NA	0.319	NA	3.088979
1343	8	69002965	69002965	A	G	intronic	PREX2	NA	NA	NA	ncRNA_intronic	ENSG00000255206	NA	NA	NA	NA	NA	8q13.2	NA	NA	NA	NA	rs12544121	0.5	0.5	0.494	0.496805	0.4026	0.4722	0.5072	0.5915	0.4836	0.42	0.51	0.49	0.62	0.4503	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.031281	NA	NA	0.391512	0.563323	NA	0.449	NA	3.0889213
1343	6	25770707	25770707	G	A	intronic	SLC17A4	NA	NA	NA	intronic	ENSG00000146039	NA	NA	NA	NA	NA	6p22.2	NA	NA	NA	NA	rs4712970	0.42	0.42	0.376	0.384784	0.2922	0.7411	0.4366	0.1936	0.3344	0.3	0.77	0.4	0.21	0.344	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.157503	NA	NA	0.275116	0.215615	NA	0.239	NA	3.088684
1343	14	71208996	71208996	A	G	intronic	MAP3K9	NA	NA	NA	intronic	ENSG00000006432	NA	NA	NA	NA	NA	14q24.2	NA	NA	NA	NA	rs4899368	0.87	0.87	0.882	0.872404	0.9115	0.7867	0.8689	0.913	0.8681	0.91	0.79	0.87	0.89	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.400636	NA	NA	NA	NA	NA	0.862	NA	3.0885
1343	18	5407839	5407839	C	T	intronic	EPB41L3	NA	NA	NA	intronic	ENSG00000082397	NA	NA	NA	NA	NA	18p11.31	NA	NA	NA	NA	rs2874686	0.72	0.72	0.684	0.671126	0.9115	0.9177	0.7983	0.1392	0.7986	0.92	0.91	0.81	0.13	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.332012	NA	NA	NA	NA	NA	0.638	NA	3.0885
1343	2	46739157	46739157	A	G	UTR3	ATP6V1E2	NM_080653:c.*13T>C	NA	NA	UTR3	ENSG00000250565	ENST00000306448:c.*13T>C,ENST00000522587:c.*13T>C	NA	NA	NA	NA	2p21	NA	NA	NA	NA	rs3814045	0.45	0.45	0.443	0.447484	0.4056	0.6171	0.5231	0.3676	0.3701	0.4	0.6	0.48	0.35	0.437	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.106882	NA	NA	0.402326	0.371312	NA	0.449	NA	3.0884074
1343	6	29942983	29942983	G	A	ncRNA_exonic	HCG9	NA	NA	NA	ncRNA_exonic	ENSG00000204625	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs378971	0.55	0.55	0.555	0.541534	0.5388	0.495	0.6254	0.6044	0.4479	0.52	0.49	0.58	0.64	0.5382	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.082653	NA	NA	0.501661	0.581511	NA	0.435	NA	3.0880056
1343	5	68609885	68609885	G	T	intronic	CCDC125	NA	NA	NA	intronic	ENSG00000183323	NA	NA	NA	NA	NA	5q13.2	NA	NA	NA	NA	rs11749723	0.42	0.42	0.398	NA	NA	NA	NA	NA	NA	0.44	0.43	0.43	0.36	0.4573	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.621073	NA	NA	0.454767	0.39396	NA	0.493	NA	3.087933
1343	17	20209474	20209474	C	T	intronic	SPECC1	NA	NA	NA	ncRNA_UTR3	ENSG00000128487	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs2120282	0.79	0.79	0.823	0.81889	0.5696	0.9861	0.6686	0.9713	0.8037	0.59	0.99	0.64	0.97	0.6761	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.628754	NA	NA	NA	NA	NA	0.732	NA	3.0876333
1343	6	31112602	31112602	G	C	intronic	CCHCR1	NA	NA	NA	intronic	ENSG00000204536	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs1265078	0.24	0.24	0.246	0.220248	0.3141	0.0724	0.2752	0.2216	0.2352	0.33	0.09	0.29	0.24	0.2754	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.197283	NA	NA	0.322907	0.242624	NA	0.232	NA	3.087593
1343	16	20482368	20482368	A	G	intronic	ACSM2A	NA	NA	NA	intronic	ENSG00000183747	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs1827711	0.5	0.5	0.521	0.515176	0.2644	0.7758	0.2709	0.6626	0.4785	0.29	0.79	0.28	0.66	0.371	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.14232	NA	NA	0.277093	0.592601	NA	0.601	NA	3.087507
1343	4	39064126	39064126	G	C	UTR5	KLHL5	NM_015990:c.-9G>C,NM_199039:c.-9G>C	NA	NA	UTR5	ENSG00000109790	ENST00000359687:c.-9G>C,ENST00000504108:c.-9G>C,ENST00000261426:c.-9G>C,ENST00000381930:c.-9G>C	NA	NA	Score=325;Name=lod=28	NA	4p14	NA	NA	NA	NA	rs2711942	0.76	0.76	0.735	0.736222	0.7465	0.8274	0.7882	0.6097	0.7658	0.75	0.84	0.82	0.63	0.752	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.369145	NA	NA	0.747497	0.65166	NA	0.601	NA	3.0873364
1343	4	68447200	68447200	A	G	intronic	STAP1	NA	NA	NA	intronic	ENSG00000035720	NA	NA	NA	NA	NA	4q13.2	NA	NA	NA	NA	rs2242331	0.27	0.27	0.265	0.247804	0.3022	0.1657	0.2147	0.3283	0.1912	0.32	0.17	0.24	0.33	0.2842	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.185612	2.185612	NA	0.326512	0.318202	NA	0.181	NA	3.087088
1343	7	66774157	66774157	T	C	ncRNA_intronic	STAG3L4	NA	NA	NA	ncRNA_intronic	ENSG00000106610	NA	NA	NA	NA	NA	7q11.21	NA	NA	NA	NA	rs2041575	0.6	0.6	0.606	0.608027	0.5249	0.6875	0.572	0.6581	0.5695	0.53	0.69	0.55	0.65	0.5564	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.811012	NA	NA	0.498372	0.654773	NA	0.565	NA	3.0869946
1343	16	57921752	57921752	A	G	intronic	CNGB1	NA	NA	NA	intronic	ENSG00000070729	NA	NA	NA	NA	NA	16q21	NA	NA	NA	NA	rs11076207	0.37	0.37	0.375	0.370208	0.3052	0.3333	0.3429	0.59	0.1973	0.31	0.28	0.34	0.6	0.3106	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.870206	NA	NA	0.297324	0.520789	NA	0.449	NA	3.086876
1343	8	17421279	17421279	T	C	intronic	SLC7A2	NA	NA	NA	intronic	ENSG00000003989	NA	NA	NA	NA	NA	8p22	NA	NA	NA	NA	rs2588173	0.88	0.88	0.869	0.866014	0.9135	0.9494	0.9078	0.7186	0.9008	0.92	0.95	0.93	0.71	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.078872	NA	NA	NA	NA	NA	0.819	NA	3.0865
1343	20	2474081	2474081	T	C	intronic	ZNF343	NA	NA	NA	intronic	ENSG00000088876,ENSG00000256566	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs4815270	0.83	0.83	0.779	0.807508	0.9135	0.8571	0.9179	0.5961	0.8548	0.92	0.87	0.92	0.59	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.084326	NA	NA	NA	NA	NA	0.761	NA	3.0865
1343	15	90335379	90335379	G	C	intronic	ANPEP	NA	NA	NA	intronic	ENSG00000166825	NA	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs8179197	0.28	0.28	0.267	0.310503	0.2952	0.2341	0.2464	0.3707	0.3691	0.29	0.25	0.24	0.33	0.3004	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.046644	NA	NA	0.317981	0.351364	NA	0.413	NA	3.086419
1343	14	106478513	106478513	C	G	intergenic	ADAM6,LINC00226	dist=40155;dist=265756	NA	NA	exonic	ENSG00000211936	NA	synonymous SNV	ENSG00000211936:ENST00000390596:exon1:c.G27C:p.L9L	NA	NA	14q32.33	NA	NA	NA	NA	rs1141386	NA	NA	0.75	0.817093	0.6819	0.9663	0.8069	0.7731	0.8691	NA	NA	NA	NA	0.7324	0.13	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.974753	NA	NA	NA	NA	NA	0.167	NA	3.0857
1343	15	92663630	92663630	A	G	intronic	SLCO3A1	NA	NA	NA	intronic	ENSG00000176463	NA	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs6496893	0.71	0.71	0.72	0.68151	0.9145	0.3492	0.7695	0.7421	0.6401	0.92	0.36	0.76	0.73	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.699413	NA	NA	NA	NA	NA	0.659	NA	3.0855
1343	17	7828558	7828558	G	T	intronic	KCNAB3	NA	NA	NA	intronic	ENSG00000170049	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs10852894	0.65	0.65	0.613	0.682708	0.4563	0.9931	0.696	0.5492	0.7669	0.46	0.99	0.64	0.54	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.436377	NA	NA	0.458202	0.565029	NA	0.616	NA	3.085498
1343	17	76120065	76120065	A	G	intronic	TMC6	NA	NA	NA	intronic	ENSG00000141524	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs2613522	0.42	0.42	0.399	0.473642	0.2823	0.506	0.3631	0.652	0.4744	0.26	0.46	0.37	0.64	0.3484	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.753393	NA	NA	0.283837	0.600091	NA	0.442	NA	3.085463
1343	10	134999602	134999602	G	C	exonic	KNDC1	NA	synonymous SNV	KNDC1:NM_152643:exon6:c.G750C:p.T250T	exonic	ENSG00000171798	NA	synonymous SNV	ENSG00000171798:ENST00000368571:exon5:c.G555C:p.T185T,ENSG00000171798:ENST00000304613:exon6:c.G750C:p.T250T,ENSG00000171798:ENST00000368572:exon6:c.G750C:p.T250T	NA	NA	10q26.3	NA	NA	NA	NA	rs3008393	0.77	0.77	0.802	0.782149	0.8618	0.6885	0.7939	0.7549	0.8252	0.85	0.7	0.78	0.72	0.8327	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00419	NA	NA	0.887074	0.80482	NA	0.174	NA	3.0850926
1344	4	119161619	119161619	A	G	intronic	NDST3	NA	NA	NA	intronic	ENSG00000164100	NA	NA	NA	NA	NA	4q26	NA	NA	NA	NA	rs641962	0.79	0.79	0.76	0.802316	0.9155	0.7937	0.9222	0.5431	0.9601	0.92	0.77	0.92	0.51	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.691736	NA	NA	NA	NA	ID=COSN167302;OCCURENCE=1(large_intestine)	0.717	NA	3.0845
1344	7	34989364	34989364	T	C	intronic	DPY19L1	NA	NA	NA	intronic	ENSG00000173852	NA	NA	NA	NA	NA	7p14.3	NA	NA	NA	NA	rs2021391	0.23	0.23	0.227	0.21885	0.2992	0.129	0.2594	0.1982	0.228	0.3	0.13	0.26	0.23	0.2835	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.998058	NA	NA	0.333088	0.215072	NA	0.304	NA	3.084212
1344	7	157930974	157930974	C	T	intronic	PTPRN2	NA	NA	NA	intronic	ENSG00000155093	NA	NA	NA	NA	NA	7q36.3	NA	NA	NA	NA	rs3752366	0.38	0.38	0.369	0.34365	0.2893	0.4663	0.4294	0.3396	0.2178	0.29	0.53	0.36	0.37	0.3334	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.193946	NA	NA	0.293673	0.348616	NA	0.384	NA	3.083627
1344	22	38074434	38074434	G	A	intronic	LGALS1	NA	NA	NA	intronic	ENSG00000100097	NA	NA	NA	NA	NA	22q13.1	NA	NA	NA	NA	rs9622682	0.48	0.48	0.482	0.488219	0.4056	0.4762	0.4438	0.6324	0.4223	0.4	0.5	0.45	0.6	0.5108	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.533159	NA	NA	NA	NA	NA	0.601	NA	3.0836
1344	5	488298	488298	A	G	intronic	SLC9A3	NA	NA	NA	intronic	ENSG00000066230	NA	NA	NA	NA	NA	5p15.33	NA	NA	NA	NA	rs2303736	0.8	0.8	0.769	0.796925	0.9165	0.5744	0.8098	0.9168	0.7321	0.9	0.55	0.81	0.91	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.243232	NA	NA	NA	NA	NA	0.42	NA	3.0835
1344	2	1168756	1168756	G	A	intronic	SNTG2	NA	NA	NA	intronic	ENSG00000172554	NA	NA	NA	NA	NA	2p25.3	NA	NA	NA	NA	rs4597564	0.38	0.38	0.347	0.372404	0.2853	0.631	0.4452	0.2315	0.3344	0.29	0.62	0.4	0.24	0.3497	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.133777	NA	NA	0.281794	0.247283	NA	0.37	NA	3.083206
1344	4	8062690	8062690	G	A	intronic	ABLIM2	NA	NA	NA	intronic	ENSG00000163995	NA	NA	NA	Score=568;Name=lod=271	NA	4p16.1	NA	NA	NA	NA	rs10938683	0.6	0.6	0.69	0.704673	0.6252	0.9206	0.7032	0.5083	0.8303	0.53	0.84	0.59	0.43	0.6953	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.172656	NA	NA	0.597384	0.539549	NA	NA	NA	3.082116
1344	10	3149402	3149402	A	G	intronic	PFKP	NA	NA	NA	intronic	ENSG00000067057	NA	NA	NA	NA	NA	10p15.2	NA	NA	Name=60	NA	rs10903967	0.61	0.61	0.601	0.595447	0.661	0.8145	0.5317	0.385	0.6319	0.66	0.82	0.47	0.41	0.6174	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.362566	NA	NA	0.639651	0.4075	NA	0.522	NA	3.081949
1344	1	201970748	201970748	G	A	intronic	RNPEP	NA	NA	NA	ncRNA_intronic	ENSG00000234678	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs4131469	0.37	0.37	0.343	0.310304	0.4294	0.3978	0.438	0.1619	0.2076	0.42	0.45	0.44	0.15	0.3884	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.564658	NA	NA	0.433837	0.184067	ID=COSN163391;OCCURENCE=1(breast)	0.493	NA	3.0816963
1344	1	207009910	207009910	T	C	intronic	IL19	NA	NA	NA	intronic	ENSG00000142224	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs2243170	0.83	0.83	0.813	0.823882	0.9185	0.7976	0.8617	0.6762	0.9264	0.92	0.78	0.86	0.72	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.25512	NA	NA	NA	NA	NA	0.812	NA	3.0815
1344	8	61851558	61851558	A	C	intergenic	CHD7,LOC100130298	dist=70972;dist=27122	NA	NA	ncRNA_exonic	ENSG00000255397	NA	NA	NA	NA	NA	8q12.2	NA	NA	NA	NA	rs4738847	0.72	0.72	0.114	0.865815	0.9185	0.9196	0.9107	0.6717	0.9867	0.73	0.81	0.81	0.53	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.473889	NA	NA	NA	NA	NA	NA	NA	3.0815
1344	22	17662699	17662699	A	G	intronic	CECR1	NA	NA	NA	intronic	ENSG00000093072	NA	NA	NA	NA	NA	22q11.1	NA	NA	NA	NA	rs58754958	0.21	0.21	0.224	0.1873	0.327	0.0456	0.1974	0.2186	0.1401	0.33	0.04	0.24	0.21	0.2568	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.110102	NA	NA	0.334884	0.228552	NA	0.174	NA	3.081316
1344	21	43766560	43766560	G	A	UTR3	TFF2	NM_005423:c.*82C>T	NA	NA	UTR3	ENSG00000160181	ENST00000291526:c.*82C>T	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs225334	0.55	0.55	0.558	0.588458	0.6233	0.2708	0.6153	0.8116	0.5593	0.6	0.24	0.62	0.77	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.05752	NA	NA	0.62885	0.781792	ID=COSN166662;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.623	NA	3.0811834
1344	19	49520502	49520502	C	T	upstream	LHB	NA	NA	NA	upstream	ENSG00000104826	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs1960072	0.51	0.51	0.466	0.496006	0.5855	0.3343	0.6081	0.4675	0.5297	0.6	0.34	0.59	0.49	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.462998	NA	NA	NA	NA	NA	0.304	NA	3.0811666
1344	2	232196472	232196472	T	A	intronic	ARMC9	NA	NA	NA	intronic	ENSG00000135931	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs1729082	0.25	0.25	0.249	0.242612	0.3171	0.2212	0.3012	0.146	0.2771	0.33	0.21	0.26	0.16	0.2985	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.247155	1.247155	NA	0.303372	0.170449	NA	0.326	NA	3.081028
1344	6	158074504	158074504	A	G	intronic	ZDHHC14	NA	NA	NA	intronic	ENSG00000175048	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs636169	0.97	0.97	0.962	0.969649	0.9195	0.999	0.9712	0.9947	0.956	0.92	1	0.96	1	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.204001	NA	NA	NA	NA	NA	0.957	NA	3.0805
1344	12	124209352	124209352	C	T	intronic	ATP6V0A2	NA	NA	NA	intronic	ENSG00000185344	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs11837144	0.74	0.74	0.731	0.7498	0.6233	0.9474	0.7709	0.7027	0.7249	0.62	0.95	0.74	0.67	0.6756	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.022994	NA	NA	0.620814	0.677031	NA	0.739	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000081552.1;CLNDSDB=.;CLNDSDBID=.	3.080286
1344	12	111758620	111758620	A	G	intronic	CUX2	NA	NA	NA	intronic	ENSG00000111249	NA	NA	NA	NA	NA	12q24.12	NA	NA	NA	NA	rs4766505	0.58	0.58	0.581	0.615415	0.2634	0.8681	0.3343	0.8707	0.5716	0.25	0.89	0.4	0.84	0.4237	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.57212	NA	NA	0.232734	0.738016	NA	0.478	NA	3.080166
1344	17	12903599	12903599	A	G	intronic	ELAC2	NA	NA	NA	intronic	ENSG00000006744	NA	NA	NA	NA	NA	17p12	NA	NA	NA	NA	rs3760316	0.26	0.26	0.245	0.286342	0.3151	0.0516	0.2579	0.4002	0.365	0.33	0.1	0.25	0.36	0.3035	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.982413	NA	NA	0.301395	0.380617	NA	0.254	NA	3.080005
1344	20	61453549	61453549	G	A	intronic	COL9A3	NA	NA	NA	intronic	ENSG00000092758	NA	NA	NA	NA	NA	20q13.33	NA	NA	NA	NA	rs2294988	0.27	0.27	0.258	0.234026	0.3042	0.2163	0.2767	0.1679	0.2393	0.32	0.24	0.32	0.19	0.2959	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.369797	NA	NA	0.320149	0.182334	NA	0.326	NA	3.079751
1344	16	64982033	64982033	C	T	intronic	CDH11	NA	NA	NA	intronic	ENSG00000140937	NA	NA	NA	NA	NA	16q21	NA	NA	NA	NA	rs2280394	0.25	0.25	0.237	0.239816	0.3161	0.3204	0.2349	0.0613	0.3231	0.32	0.32	0.23	0.06	0.2945	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.811137	NA	NA	0.309723	0.102634	NA	0.246	NA	3.079677
1344	6	70897967	70897967	G	A	intronic	COL19A1	NA	NA	NA	intronic	ENSG00000082293	NA	NA	NA	NA	NA	6q13	NA	NA	NA	NA	rs3828775	0.25	0.25	0.24	0.24381	0.3131	0.1944	0.1614	0.2247	0.3078	0.32	0.21	0.19	0.23	0.2908	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.419222	NA	NA	0.316512	0.239673	NA	0.174	NA	3.079588
1344	7	126079144	126079144	A	G	UTR3	GRM8	NM_000845:c.*29T>C,NM_001127323:c.*84T>C	NA	NA	UTR3	ENSG00000179603	ENST00000444921:c.*29T>C,ENST00000339582:c.*29T>C,ENST00000358373:c.*84T>C,ENST00000341617:c.*1321T>C,ENST00000472701:c.*302T>C	NA	NA	NA	NA	7q31.33	NA	NA	NA	NA	rs712723	0.41	0.41	0.393	0.404752	0.4235	0.38	0.4568	0.3646	0.4284	0.43	0.39	0.45	0.36	0.4109	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.293828	NA	NA	0.419419	0.386064	NA	0.319	NA	3.0795144
1344	8	61851559	61851559	G	A	intergenic	CHD7,LOC100130298	dist=70973;dist=27121	NA	NA	ncRNA_exonic	ENSG00000255397	NA	NA	NA	NA	NA	8q12.2	NA	NA	NA	NA	rs9987236	0.7	0.7	0.104	0.868211	0.9205	0.9206	0.9179	0.674	0.9877	0.72	0.8	0.79	0.51	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.014999	NA	NA	NA	NA	NA	NA	NA	3.0795
1344	19	371396	371396	G	C	intronic	THEG	NA	NA	NA	intronic	ENSG00000105549	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs644644	0.74	0.74	NA	0.830072	0.9205	0.7817	0.8473	0.7882	0.8313	0.82	0.69	0.72	0.7	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.668229	NA	NA	NA	NA	NA	0.754	NA	3.0795
1344	1	19519887	19519887	G	C	intronic	UBR4	NA	NA	NA	intronic	ENSG00000127481	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs72651403	0.36	0.36	0.321	0.339457	0.3062	0.629	0.4092	0.1172	0.3262	0.29	0.65	0.37	0.12	0.3248	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.75673	1.75673	NA	0.289535	0.150704	NA	0.203	NA	3.079465
1344	21	31973685	31973685	C	T	downstream	KRTAP22-1	NA	NA	NA	downstream	ENSG00000186924	NA	NA	NA	NA	NA	21q22.11	NA	NA	NA	NA	rs1961491	0.49	0.49	0.47	0.522364	0.5875	0.3026	0.6398	0.4523	0.6933	0.56	0.31	0.64	0.48	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.902679	NA	NA	NA	NA	NA	0.543	NA	3.0791666
1344	19	43773599	43773599	T	C	UTR5	PSG9	NM_002784:c.-16A>G	NA	NA	UTR5	ENSG00000183668	ENST00000418820:c.-16A>G,ENST00000593948:c.-16A>G,ENST00000270077:c.-16A>G,ENST00000443718:c.-16A>G,ENST00000244293:c.-16A>G,ENST00000596730:c.-16A>G	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs1058071	0.62	0.62	0.584	0.667532	0.3787	0.9425	0.5014	0.7254	0.7209	0.37	0.96	0.48	0.73	0.5074	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.405131	NA	NA	0.368256	0.682705	NA	0.543	NA	3.0789774
1344	22	22724341	22724341	A	C	intergenic	LOC96610,ZNF280B	dist=47017;dist=114431	NA	NA	exonic	ENSG00000211649	NA	synonymous SNV	ENSG00000211649:ENST00000390295:exon2:c.A237C:p.T79T	NA	NA	22q11.22	NA	NA	NA	NA	rs9607803	0.42	0.42	0.373	0.426318	0.4851	0.377	0.4957	0.3056	0.5307	0.49	0.41	0.46	0.29	0.4684	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.22624	NA	NA	0.467608	0.291447	NA	0.377	NA	3.078892
1344	18	357570	357570	T	C	intronic	COLEC12	NA	NA	NA	intronic	ENSG00000158270	NA	NA	NA	NA	NA	18p11.32	NA	NA	NA	NA	rs685658	0.27	0.27	0.248	0.257788	0.3101	0.0734	0.3343	0.3321	0.2393	0.31	0.1	0.37	0.34	0.2938	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.564251	2.564251	NA	0.317261	0.327735	NA	0.355	NA	3.078839
1344	10	18789724	18789724	T	G	intronic	CACNB2	NA	NA	NA	intronic	ENSG00000165995	NA	NA	NA	NA	NA	10p12.31	NA	NA	NA	NA	rs4485000	0.26	0.26	0.259	0.229832	0.329	0.0377	0.2464	0.3699	0.1247	0.34	0.05	0.27	0.39	0.2769	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.559402	3.559402	NA	0.315698	0.344984	ID=COSN163576;OCCURENCE=1(breast),1(endometrium)	0.225	NA	3.078402
1344	15	51502844	51502844	A	C	UTR3	CYP19A1	NM_000103:c.*161T>G,NM_031226:c.*161T>G	NA	NA	ncRNA_UTR3	ENSG00000137869	NA	NA	NA	NA	NA	15q21.2	NA	NA	NA	NA	rs4646	0.68	0.68	0.689	0.664337	0.7097	0.7034	0.5274	0.7156	0.6053	0.71	0.72	0.57	0.67	0.7122	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.43212	NA	NA	NA	NA	NA	0.63	NA	3.0781
1344	11	77884782	77884782	C	T	ncRNA_exonic	LOC100289388	NA	NA	NA	ncRNA_exonic	ENSG00000246174	NA	NA	NA	NA	NA	11q14.1	NA	NA	NA	NA	rs230661	0.62	0.62	0.615	0.589457	0.5249	0.5	0.6499	0.8601	0.3395	0.53	0.5	0.68	0.85	0.5438	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.306187	2.306187	NA	0.520154	0.803409	NA	0.652	NA	3.0778126
1344	2	43903066	43903066	A	G	exonic	LOC728819	NA	synonymous SNV	LOC728819:NM_001101330:exon1:c.T396C:p.G132G	ncRNA_exonic	ENSG00000223658	NA	NA	NA	NA	NA	2p21	NA	NA	NA	NA	rs3828297	0.54	0.54	0.546	0.542532	0.7217	0.1905	0.5432	0.6082	0.6319	0.73	0.19	0.62	0.62	0.6447	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.832566	NA	NA	0.722741	0.652938	ID=COSN166080;OCCURENCE=1(NS)	0.522	NA	3.0775256
1344	2	27528692	27528692	T	C	intronic	TRIM54	NA	NA	NA	intronic	ENSG00000138100	NA	NA	NA	NA	NA	2p23.3	NA	NA	NA	NA	rs4665963	0.38	0.38	0.373	0.46246	0.2485	0.1617	0.4597	0.8926	0.4131	0.24	0.13	0.41	0.87	0.4124	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.113356	NA	NA	0.261689	0.776113	NA	0.543	NA	3.077411
1344	12	46758494	46758494	A	G	intronic	SLC38A2	NA	NA	NA	intronic	ENSG00000134294	NA	NA	NA	NA	NA	12q13.11	NA	Name=Pol2	NA	NA	rs2307061	0.76	0.76	0.774	0.759385	0.6451	0.8006	0.6657	0.9569	0.6339	0.67	0.79	0.66	0.93	0.6641	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.303267	NA	NA	0.613541	0.908988	NA	0.681	NA	3.077259
1344	19	53989843	53989843	A	T	intronic	ZNF813	NA	NA	NA	intronic	ENSG00000198346	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs17173219	0.27	0.27	0.283	0.28774	0.3141	0.1825	0.2709	0.2958	0.3701	0.32	0.17	0.28	0.32	0.302	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.368883	NA	NA	0.306696	0.29385	NA	0.283	NA	3.077204
1344	1	95332864	95332864	C	T	intronic	SLC44A3	NA	NA	NA	intronic	ENSG00000143036	NA	NA	NA	NA	NA	1p21.3	NA	NA	NA	NA	rs12137650	0.25	0.25	0.227	0.227436	0.3151	0.1508	0.3357	0.2231	0.1452	0.29	0.14	0.35	0.22	0.2828	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.332731	1.332731	NA	0.325116	0.232183	NA	0.435	NA	3.076984
1344	11	3225964	3225964	C	A	intergenic	OSBPL5,MRGPRG	dist=39382;dist=13210	NA	NA	intergenic	ENSG00000234791,ENSG00000182170	dist=14805;dist=13210	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs10833460	0.26	0.26	0.248	0.26897	0.2565	0.1111	0.3732	0.3631	0.2434	0.25	0.13	0.32	0.39	NA	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.207611	NA	NA	NA	NA	NA	0.283	NA	3.0768334
1344	8	23004629	23004629	T	C	intronic	TNFRSF10D	NA	NA	NA	intronic	ENSG00000173530	NA	NA	NA	NA	NA	8p21.3	NA	NA	NA	NA	rs3924519	0.5	0.5	0.461	0.489816	0.2744	0.8343	0.5086	0.4281	0.4264	0.28	0.88	0.48	0.41	0.3731	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.62742	NA	NA	0.275814	0.419655	NA	0.391	NA	3.076686
1344	6	36714139	36714139	A	G	intronic	CPNE5	NA	NA	NA	intronic	ENSG00000124772	NA	NA	NA	NA	NA	6p21.2	NA	NA	NA	NA	rs3213535	0.27	0.27	0.315	0.249002	0.3191	0.1806	0.1772	0.3283	0.1912	0.33	0.21	0.19	0.32	0.2834	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.047148	NA	NA	0.32093	0.300499	NA	0.225	NA	3.07657
1344	7	157930979	157930979	C	G	intronic	PTPRN2	NA	NA	NA	intronic	ENSG00000155093	NA	NA	NA	NA	NA	7q36.3	NA	NA	NA	NA	rs3752367	0.41	0.41	0.407	0.3748	0.2893	0.4663	0.4395	0.438	0.2372	0.29	0.53	0.37	0.48	0.3402	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.150694	NA	NA	0.294022	0.43872	NA	0.42	NA	3.076478
1344	3	12616533	12616533	G	A	intronic	MKRN2	NA	NA	NA	intronic	ENSG00000075975	NA	NA	NA	NA	NA	3p25.2	NA	NA	NA	NA	rs3773341	0.43	0.43	0.46	0.497204	0.2704	0.5605	0.304	0.6369	0.6135	0.27	0.57	0.28	0.65	0.3722	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.836541	NA	NA	0.281047	0.543577	NA	0.384	NA	3.076353
1344	17	6364753	6364753	A	G	exonic	PITPNM3	NA	synonymous SNV	PITPNM3:NM_001165966:exon17:c.T2322C:p.D774D,PITPNM3:NM_031220:exon18:c.T2430C:p.D810D	exonic	ENSG00000091622	NA	synonymous SNV	ENSG00000091622:ENST00000421306:exon17:c.T2322C:p.D774D,ENSG00000091622:ENST00000262483:exon18:c.T2430C:p.D810D	NA	NA	17p13.2	NA	NA	NA	NA	rs11654099	0.91	0.91	0.914	0.913938	0.8728	0.9058	0.8573	0.9939	0.8967	0.86	0.92	0.86	0.99	0.8687	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.63959	NA	NA	0.848953	0.967317	NA	0.964	NA	3.0762136
1344	4	54793643	54793643	T	C	intergenic	LNX1-AS2,RPL21P44	dist=322095;dist=58023	NA	NA	intronic	ENSG00000145216	NA	NA	NA	NA	NA	4q12	NA	NA	NA	NA	rs13108674	0.6	0.6	0.635	0.652756	0.5905	0.6667	0.5173	0.6415	0.8139	0.58	0.67	0.53	0.63	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.549349	NA	NA	NA	NA	NA	0.63	NA	3.0761667
1344	17	74007846	74007846	A	G	intronic	EVPL	NA	NA	NA	intronic	ENSG00000167880	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs2290251	0.27	0.27	0.282	0.278355	0.3151	0.2183	0.2507	0.3132	0.2751	0.3	0.24	0.25	0.29	0.2926	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.045124	NA	NA	0.316163	0.306627	NA	0.391	NA	3.076137
1344	12	15702007	15702007	C	T	intronic	PTPRO	NA	NA	NA	intronic	ENSG00000151490	NA	NA	NA	NA	NA	12p12.3	NA	NA	NA	NA	rs7132826	0.28	0.28	0.261	0.30611	0.325	0.2698	0.2594	0.3162	0.3436	0.32	0.23	0.29	0.28	0.306	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.125187	NA	NA	0.29314	0.324557	NA	0.297	NA	3.07586
1344	12	41303825	41303825	A	C	intronic	CNTN1	NA	NA	NA	intronic	ENSG00000018236	NA	NA	NA	NA	NA	12q12	NA	NA	NA	NA	rs2304819	0.23	0.23	0.213	0.221046	0.338	0.2014	0.1859	0.0817	0.3344	0.33	0.2	0.19	0.13	0.275	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.500482	NA	NA	0.311264	0.099183	NA	0.246	NA	3.075736
1344	15	90336373	90336373	T	C	intronic	ANPEP	NA	NA	NA	intronic	ENSG00000166825	NA	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs16943605	0.31	0.31	0.314	0.346246	0.2972	0.2351	0.2594	0.497	0.3691	0.29	0.25	0.26	0.46	0.3082	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.90573	1.90573	NA	0.319028	0.458409	NA	0.449	NA	3.075572
1344	17	8139339	8139339	T	C	intronic	CTC1	NA	NA	NA	intronic	ENSG00000178971	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs66582670	0.33	0.33	0.315	0.307907	0.3002	0.3343	0.4798	0.2602	0.2311	0.3	0.4	0.43	0.23	0.3128	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.254035	NA	NA	0.311456	0.254455	NA	0.268	NA	3.075544
1344	14	24882440	24882440	G	C	intronic	NYNRIN	NA	NA	NA	intronic	ENSG00000205978	NA	NA	NA	NA	NA	14q12	NA	NA	NA	NA	rs4982909	0.89	0.89	0.896	0.896366	0.9245	0.749	0.9611	0.9244	0.9356	0.92	0.76	0.96	0.94	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.369793	NA	NA	NA	NA	NA	0.913	NA	3.0755
1344	11	1159133	1159133	G	A	intergenic	MUC2,MUC5B	dist=54716;dist=85162	NA	NA	intronic	ENSG00000215182	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs35917282	0.55	0.55	0.544	0.497005	0.5915	0.6825	0.5447	0.2269	0.5399	0.59	0.73	0.58	0.23	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.394797	NA	NA	NA	NA	NA	0.507	NA	3.0751667
1345	12	123103016	123103016	G	T	intronic	KNTC1	NA	NA	NA	intronic	ENSG00000184445	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs7301589	0.44	0.44	0.284	0.492812	0.3429	0.4484	0.2738	0.8109	0.4182	0.32	0.45	0.3	0.72	0.3504	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.163517	NA	NA	0.232004	0.636683	NA	0.123	NA	3.074696
1345	2	15493881	15493881	A	G	intronic	NBAS	NA	NA	NA	intronic	ENSG00000151779	NA	NA	NA	NA	NA	2p24.3	NA	Name=GATA-2	NA	NA	rs2277915	0.42	0.42	0.38	0.374601	0.6869	0.1825	0.5735	0.1452	0.4202	0.67	0.2	0.57	0.16	0.5555	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.472501	NA	NA	0.683256	0.255788	NA	0.5	NA	3.074344
1345	9	140055703	140055703	G	A	intronic	GRIN1	NA	NA	NA	intronic	ENSG00000176884	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs41290007	0.16	0.16	0.217	0.143371	0.333	0.002	0.196	0.0461	0.1881	0.34	0.0017	0.2	0.04	0.2731	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.055317	NA	NA	0.319609	0.086709	NA	0.022	NA	3.074291
1345	16	30376959	30376959	T	C	intronic	TBC1D10B	NA	NA	NA	intronic	ENSG00000169221	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs11646130	0.17	0.17	0.164	0.172324	0.327	0.0794	0.2032	0.0356	0.272	0.31	0.08	0.2	0.05	0.2735	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.151228	NA	NA	0.325349	0.088985	NA	0.261	NA	3.074151
1345	1	19834213	19834213	C	T	intergenic	CAPZB,MINOS1	dist=22147;dist=89258	NA	NA	intergenic	ENSG00000077549,ENSG00000201609	dist=22147;dist=2874	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs12041788	0.23	0.23	0.217	0.205072	0.2594	0.4018	0.1484	0.0174	0.2403	0.25	0.4	0.17	0.03	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.326189	NA	NA	NA	NA	NA	0.138	NA	3.0739334
1345	14	105644151	105644151	T	C	intronic	NUDT14	NA	NA	NA	ncRNA_intronic	ENSG00000257622	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs1882848	0.64	0.64	0.653	0.641573	0.6223	0.5327	0.6297	0.7943	0.5757	0.63	0.58	0.62	0.74	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.319728	NA	NA	0.63728	0.774566	NA	0.746	NA	3.0737533
1345	3	189689904	189689904	A	G	intronic	LEPREL1	NA	NA	NA	intronic	ENSG00000090530	NA	NA	NA	NA	NA	3q28	NA	NA	NA	NA	rs710543	0.92	0.92	0.918	0.903554	0.9264	0.9375	0.8991	0.9054	0.8456	0.94	0.94	0.91	0.9	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.116668	NA	NA	NA	NA	NA	0.899	NA	3.0736
1345	20	60990606	60990606	A	C	intronic	RBBP8NL	NA	NA	NA	intronic	ENSG00000130701	NA	NA	NA	NA	NA	20q13.33	NA	NA	NA	NA	rs3810554	0.33	0.33	0.303	0.289137	0.3231	0.4395	0.3501	0.1218	0.2822	0.34	0.47	0.31	0.16	0.3177	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.54523	NA	NA	0.285964	0.146231	NA	0.232	NA	3.073236
1345	14	107095326	107095326	C	T	intergenic	LINC00221,NONE	dist=143797;dist=NONE	NA	NA	exonic	ENSG00000211970	NA	nonsynonymous SNV	ENSG00000211970:ENST00000390630:exon2:c.G154A:p.G52S	NA	NA	14q32.33	NA	NA	NA	NA	rs1064309	0.77	0.77	0.92	0.94988	0.9851	1	0.9942	0.9402	0.8436	0.8	0.84	0.77	0.64	0.7751	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.470011	NA	0.71	NA	NA	NA	0.435	NA	3.0731334
1345	11	64024056	64024056	C	A	intronic	PLCB3	NA	NA	NA	intronic	ENSG00000149782	NA	NA	NA	NA	NA	11q13.1	Score=979;Name=V$AP4_Q5	NA	NA	NA	rs588177	0.43	0.43	0.417	0.406949	0.667	0.2639	0.5202	0.1611	0.5389	0.68	0.26	0.53	0.17	0.5796	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.990879	NA	NA	0.680591	0.2408	ID=COSN163976;OCCURENCE=1(breast)	0.5	NA	3.072809
1345	8	22277040	22277040	G	A	intronic	SLC39A14	NA	NA	NA	intronic	ENSG00000104635	NA	NA	NA	NA	NA	8p21.3	NA	NA	NA	NA	rs10101909	0.36	0.36	0.339	0.353834	0.3022	0.5833	0.2983	0.1498	0.4857	0.31	0.63	0.36	0.15	0.3318	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.133721	NA	NA	0.293256	0.194734	NA	0.304	NA	3.072744
1345	5	176001975	176001975	T	C	intronic	CDHR2	NA	NA	NA	intronic	ENSG00000074276	NA	NA	NA	NA	NA	5q35.2	NA	NA	NA	NA	rs1078450	0.86	0.86	0.846	0.837859	0.9274	0.8403	0.9049	0.733	0.8374	0.93	0.84	0.93	0.74	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.043779	NA	NA	NA	NA	NA	0.775	NA	3.0726
1345	8	126445537	126445537	C	T	intronic	TRIB1	NA	NA	NA	intronic	ENSG00000173334	NA	NA	NA	NA	NA	8q24.13	NA	NA	NA	NA	rs2235110	0.46	0.46	0.477	0.493411	0.2803	0.6478	0.2983	0.6165	0.5256	0.28	0.64	0.3	0.62	0.3785	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.722817	NA	NA	0.269365	0.56877	NA	0.457	NA	3.071835
1345	2	224744701	224744701	A	G	intronic	WDFY1	NA	NA	NA	intronic	ENSG00000085449	NA	NA	NA	NA	NA	2q36.1	NA	NA	NA	NA	rs516849	0.71	0.71	0.683	0.715455	0.9284	0.5853	0.8141	0.4614	0.9039	0.93	0.53	0.84	0.49	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.564042	NA	NA	NA	NA	NA	0.797	NA	3.0716
1345	8	144239660	144239660	G	A	UTR3	LY6H	NM_002347:c.*7C>T,NM_001130478:c.*7C>T,NM_001135655:c.*7C>T	NA	NA	UTR3	ENSG00000176956	ENST00000414417:c.*7C>T,ENST00000342752:c.*7C>T,ENST00000430474:c.*7C>T	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs7007949	0.43	0.43	0.465	0.428115	0.3996	0.2837	0.3314	0.6846	0.3282	0.4	0.3	0.37	0.7	0.433	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.560938	NA	NA	0.429737	0.615472	NA	0.565	NA	3.0709964
1345	15	101523661	101523661	G	C	intronic	LRRK1	NA	NA	NA	intronic	ENSG00000154237	NA	NA	NA	NA	NA	15q26.3	NA	NA	NA	NA	rs11632621	0.96	0.96	0.958	0.953275	0.9294	0.999	0.9553	0.9546	0.9274	0.93	1	0.94	0.96	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.2084	NA	NA	NA	NA	NA	0.928	NA	3.0706
1345	10	97602091	97602091	T	C	ncRNA_intronic	ENTPD1-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000226688,ENSG00000240527	NA	NA	NA	NA	NA	10q24.1	NA	NA	NA	NA	rs3181131	0.48	0.48	0.454	0.498403	0.5119	0.251	0.6513	0.5219	0.5992	0.52	0.26	0.64	0.56	0.5361	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.361857	2.361857	NA	0.548267	0.516122	NA	0.536	NA	3.0703996
1345	19	35451742	35451742	G	A	intronic	ZNF792	NA	NA	NA	intronic	ENSG00000180884	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs2651078	0.31	0.31	0.324	0.325879	0.329	0.1954	0.1859	0.4849	0.3415	0.34	0.2	0.22	0.46	0.3047	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.247385	NA	NA	0.29593	0.443032	NA	0.254	NA	3.07037
1345	2	68358341	68358341	T	C	UTR3	WDR92	NM_138458:c.*29A>G	NA	NA	UTR3	ENSG00000243667	ENST00000295121:c.*29A>G	NA	NA	NA	NA	2p14	NA	NA	NA	NA	rs62145930	0.48	0.48	0.447	0.513578	0.4046	0.496	0.4597	0.5303	0.6595	0.41	0.5	0.49	0.54	0.4693	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.211498	NA	NA	0.38907	0.493191	NA	0.384	NA	3.0703634
1345	3	39435865	39435865	G	C	intronic	SLC25A38	NA	NA	NA	intronic	ENSG00000144659	NA	NA	NA	NA	NA	3p22.1	NA	NA	NA	NA	rs870843	0.27	0.27	0.256	0.261781	0.3082	0.2778	0.3127	0.1914	0.2566	0.3	0.28	0.3	0.18	0.2966	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.575246	NA	NA	0.324884	0.214026	NA	0.232	NA	3.070316
1345	17	80887206	80887206	A	G	intronic	TBCD	NA	NA	NA	intronic	ENSG00000141556	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs729124	0.32	0.32	0.285	0.317093	0.3201	0.4712	0.2896	0.211	0.318	0.3	0.45	0.31	0.2	0.3012	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.852435	NA	NA	0.308559	0.212701	NA	0.37	NA	3.070141
1345	19	36558712	36558712	C	T	intronic	WDR62	NA	NA	NA	intronic	ENSG00000075702	NA	NA	NA	NA	NA	19q13.12	NA	NA	NA	NA	rs10423651	0.29	0.29	0.293	0.2498	0.33	0.2857	0.2219	0.2239	0.1851	0.34	0.29	0.25	0.25	0.2809	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.152134	NA	NA	0.31907	0.226509	NA	0.159	NA	3.07003
1345	12	46761127	46761127	G	A	intronic	SLC38A2	NA	NA	NA	intronic	ENSG00000134294	NA	NA	NA	NA	NA	12q13.11	NA	NA	Name=59	NA	rs10880959	0.75	0.75	0.781	0.757188	0.6461	0.8006	0.6643	0.9486	0.6339	0.67	0.79	0.66	0.91	0.6638	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.550341	NA	NA	0.620493	0.899001	NA	0.681	NA	3.069607
1345	17	7401572	7401572	A	T	intronic	POLR2A	NA	NA	NA	intronic	ENSG00000181222	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs41554719	0.16	0.16	0.149	0.117212	0.3429	0.001	0.2089	0.0129	0.0808	0.33	0.0017	0.25	0.02	0.2407	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.164303	NA	NA	0.346977	0.060826	NA	0.101	NA	3.069423
1345	19	12492036	12492036	A	T	intergenic	ZNF442,ZNF799	dist=15561;dist=8792	NA	NA	ncRNA_exonic	ENSG00000248406	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs10417283	0.3	0.3	0.264	0.300519	0.4334	0.0665	0.3401	0.3472	0.3139	0.45	0.06	0.39	0.3	0.4973	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.052722	NA	NA	NA	NA	NA	0.312	NA	3.0693
1345	1	43782846	43782846	G	A	intronic	TIE1	NA	NA	NA	intronic	ENSG00000066056	NA	NA	NA	NA	NA	1p34.2	NA	Name=CTCF	NA	NA	rs1198982	0.74	0.74	0.741	0.80012	0.6233	0.872	0.6412	0.8933	0.8947	0.61	0.87	0.64	0.88	0.6981	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.326057	NA	NA	0.609302	0.850658	NA	0.659	NA	3.069298
1345	19	4250991	4250991	A	G	intronic	CCDC94	NA	NA	NA	intronic	ENSG00000105248	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs3803908	0.38	0.38	0.384	0.422524	0.3022	0.4464	0.2695	0.528	0.4877	0.31	0.45	0.27	0.51	0.346	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.065587	NA	NA	0.282674	0.499092	ID=COSN165692;OCCURENCE=1(NS)	0.406	NA	3.069126
1345	6	90450135	90450135	A	G	intronic	MDN1	NA	NA	NA	intronic	ENSG00000112159	NA	NA	NA	NA	NA	6q15	NA	NA	NA	NA	rs2180140	0.47	0.47	0.452	0.440695	0.2813	0.6875	0.5605	0.4198	0.2935	0.29	0.69	0.54	0.43	0.3622	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.792268	NA	NA	0.287558	0.409215	NA	0.37	NA	3.068942
1345	2	37543371	37543371	A	G	intronic	PRKD3	NA	NA	NA	intronic	ENSG00000115825	NA	NA	NA	NA	NA	2p22.2	NA	NA	NA	NA	rs6544066	0.41	0.41	0.393	0.441494	0.3022	0.5585	0.5072	0.3835	0.4959	0.31	0.53	0.48	0.36	0.3598	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.979092	NA	NA	0.26907	0.367453	NA	0.558	NA	3.06893
1345	7	13911420	13911420	G	A	intergenic	ARL4A,ETV1	dist=1180862;dist=19436	NA	NA	upstream	ENSG00000213875	NA	NA	NA	NA	NA	7p21.2	NA	NA	NA	NA	rs10225805	0.42	0.42	0.384	0.451877	0.4314	0.3681	0.4467	0.4516	0.5634	0.44	0.35	0.44	0.46	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.594946	NA	NA	NA	NA	NA	0.362	NA	3.0686
1345	9	136030458	136030458	C	T	intronic	GBGT1	NA	NA	NA	intronic	ENSG00000148288,ENSG00000160271	NA	NA	NA	NA	NA	9q34.2	NA	NA	NA	NA	rs651453	0.9	0.9	0.894	0.885982	0.9314	0.997	0.9251	0.7163	0.9264	0.94	1	0.92	0.72	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.460153	NA	NA	NA	NA	NA	0.913	NA	3.0686
1345	15	40703609	40703609	A	G	intronic	IVD	NA	NA	NA	intronic	ENSG00000128928	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs4924466	0.97	0.97	0.965	0.978435	0.9314	1	0.9712	0.9962	0.9857	0.94	1	0.97	1	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.74369	NA	NA	NA	NA	NA	0.971	NA	3.0686
1345	21	43519032	43519032	G	A	intronic	UMODL1	NA	NA	NA	intronic	ENSG00000177398	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs220312	0.3	0.3	0.278	0.282149	0.3151	0.37	0.3761	0.1415	0.2812	0.33	0.36	0.34	0.16	0.307	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.725476	NA	NA	0.309552	0.174011	NA	0.312	NA	3.068348
1345	11	43515304	43515304	C	G	intronic	TTC17	NA	NA	NA	intronic	ENSG00000052841	NA	NA	NA	NA	NA	11p11.2	NA	NA	NA	NA	rs12276980	0.35	0.35	0.329	0.371605	0.3062	0.0704	0.438	0.6936	0.2669	0.3	0.07	0.42	0.69	0.3229	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.283417	NA	NA	0.302674	0.626419	NA	0.399	NA	3.068226
1345	4	1741740	1741740	G	A	intronic	TACC3	NA	NA	NA	ncRNA_exonic	ENSG00000218422	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs2249143	0.32	0.32	0.358	0.309305	0.4394	0.1607	0.3199	0.3351	0.2863	0.44	0.18	0.32	0.31	0.3756	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.310979	NA	NA	0.450116	0.363595	NA	0.391	NA	3.0682173
1345	2	44531484	44531484	C	T	intronic	SLC3A1	NA	NA	NA	intronic	ENSG00000138079	NA	NA	NA	NA	NA	2p21	NA	Name=GR	NA	NA	rs3738984	0.54	0.54	0.549	0.541933	0.6541	0.3204	0.5807	0.5272	0.6472	0.65	0.35	0.6	0.55	0.61	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.920402	NA	NA	0.667907	0.55833	NA	0.601	NA	3.067993
1345	19	53832879	53832879	C	T	intergenic	BIRC8,ZNF845	dist=38004;dist=4123	NA	NA	intergenic	ENSG00000174677,ENSG00000213799	dist=13583;dist=4123	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs34135479	0.29	0.29	0.264	0.297923	0.2654	0.2837	0.2421	0.3896	0.2618	0.26	0.28	0.24	0.38	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.267771	NA	NA	NA	NA	NA	0.283	NA	3.0679334
1345	19	53832915	53832915	T	C	intergenic	BIRC8,ZNF845	dist=38040;dist=4087	NA	NA	intergenic	ENSG00000174677,ENSG00000213799	dist=13619;dist=4087	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs34839043	0.29	0.29	0.263	0.297923	0.2654	0.2837	0.2421	0.3896	0.2618	0.26	0.28	0.24	0.38	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.985076	NA	NA	NA	NA	NA	0.283	NA	3.0679334
1345	19	53833924	53833924	T	C	intergenic	BIRC8,ZNF845	dist=39049;dist=3078	NA	NA	intergenic	ENSG00000174677,ENSG00000213799	dist=14628;dist=3078	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs34697778	0.29	0.29	0.277	0.298123	0.2654	0.2837	0.2421	0.3903	0.2618	0.26	0.28	0.24	0.38	NA	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.400376	NA	NA	NA	NA	NA	0.275	NA	3.0679334
1345	16	21222941	21222941	C	A	upstream	ZP2	NA	NA	NA	UTR5	ENSG00000103310	ENST00000574002:c.-73G>T	NA	NA	NA	NA	16p12.2	NA	NA	NA	NA	rs2075521	0.45	0.45	0.446	0.442891	0.4801	0.5427	0.4006	0.2837	0.547	0.46	0.54	0.46	0.31	0.4524	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.100384	NA	NA	NA	NA	NA	0.362	NA	3.0675
1345	21	47766139	47766139	T	C	intronic	PCNT	NA	NA	NA	intronic	ENSG00000160299	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs9982233	0.68	0.68	0.686	0.67512	0.6501	0.6409	0.5447	0.8222	0.6299	0.66	0.69	0.56	0.8	0.6408	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.893748	NA	NA	0.641744	0.781434	NA	0.696	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000081358.1;CLNDSDB=.;CLNDSDBID=.	3.067356
1345	1	158224825	158224825	C	T	intronic	CD1A	NA	NA	NA	intronic	ENSG00000158477	NA	NA	NA	NA	NA	1q23.1	NA	NA	NA	NA	rs411089	0.48	0.48	0.489	0.542732	0.2614	0.6607	0.3934	0.7156	0.5828	0.27	0.64	0.37	0.72	0.3938	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.636621	NA	NA	0.277791	0.667045	NA	0.486	NA	3.067009
1345	1	111998679	111998679	C	A	intronic	ATP5F1	NA	NA	NA	intronic	ENSG00000116459	NA	NA	NA	NA	NA	1p13.2	NA	NA	NA	NA	rs12047479	0.3	0.3	0.34	0.330871	0.2893	0.3036	0.1859	0.4281	0.3732	0.28	0.3	0.2	0.41	0.3234	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.710969	NA	NA	0.320349	0.411711	NA	0.348	NA	3.066951
1345	8	82761251	82761251	T	G	intergenic	SNX16,NONE	dist=6730;dist=NONE	NA	NA	intergenic	ENSG00000104497,ENSG00000254689	dist=6150;dist=36361	NA	NA	NA	NA	8q21.13	NA	NA	NA	NA	rs57750343	0.27	0.27	0.269	0.28155	0.2664	0.377	0.3184	0.1029	0.4141	0.28	0.37	0.31	0.13	NA	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.5065	NA	NA	NA	NA	NA	0.217	NA	3.0669334
1345	19	12492039	12492039	G	T	intergenic	ZNF442,ZNF799	dist=15564;dist=8789	NA	NA	ncRNA_exonic	ENSG00000248406	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs10414984	0.3	0.3	0.266	0.300519	0.4334	0.0665	0.3401	0.3472	0.3139	0.45	0.06	0.39	0.3	0.4998	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.769792	NA	NA	NA	NA	NA	0.312	NA	3.0668
1345	2	39233500	39233500	G	A	intronic	SOS1	NA	NA	NA	intronic	ENSG00000115904	NA	NA	NA	NA	NA	2p22.1	NA	NA	NA	NA	rs7577088	0.91	0.91	0.917	0.905152	0.9334	0.8403	0.9452	0.9766	0.818	0.94	0.82	0.92	0.98	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.154565	NA	NA	NA	NA	NA	0.964	NA	3.0666
1345	2	71762232	71762232	C	T	intronic	DYSF	NA	NA	NA	intronic	ENSG00000135636	NA	NA	NA	NA	NA	2p13.2	NA	NA	NA	NA	rs4852801	0.48	0.48	0.497	0.457668	0.67	0.1865	0.572	0.4856	0.3998	0.67	0.15	0.59	0.47	0.5846	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.698465	NA	NA	0.678837	0.531548	NA	0.594	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000080231.1;CLNDSDB=.;CLNDSDBID=.	3.066563
1345	1	93163385	93163385	A	G	intronic	EVI5	NA	NA	NA	intronic	ENSG00000067208	NA	NA	NA	NA	NA	1p22.1	NA	Name=MafK_(SC-477),MafK_(ab50322)	NA	NA	rs7418336	0.68	0.68	0.7	0.709065	0.6203	0.9296	0.7075	0.5537	0.7843	0.62	0.88	0.65	0.55	0.6838	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.17026	NA	NA	0.629595	0.545186	NA	0.601	NA	3.066305
1345	12	114395571	114395571	C	T	intronic	RBM19	NA	NA	NA	intronic	ENSG00000122965	NA	NA	NA	NA	NA	12q24.21	NA	NA	NA	NA	rs2290786	0.24	0.24	0.245	0.240415	0.3181	0.1677	0.2594	0.1505	0.3436	0.31	0.14	0.3	0.19	0.2889	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.040536	NA	NA	0.327093	0.189741	NA	0.203	NA	3.065907
1345	2	100288931	100288931	G	A	intronic	AFF3	NA	NA	NA	intronic	ENSG00000144218	NA	NA	NA	NA	NA	2q11.2	NA	NA	NA	NA	rs4851222	0.59	0.59	0.604	0.599241	0.4642	0.6538	0.5346	0.7375	0.5409	0.46	0.62	0.52	0.78	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.012556	NA	NA	0.470145	0.723266	NA	0.58	NA	3.065655
1345	17	61781984	61781984	G	T	intronic	STRADA	NA	NA	NA	UTR3	ENSG00000266173	ENST00000245865:c.*255C>A,ENST00000578008:c.*255C>A	NA	NA	NA	NA	17q23.3	NA	NA	NA	NA	rs372457035	NA	NA	NA	0.807109	0.833	0.6319	0.8026	0.9032	0.8344	NA	NA	NA	NA	0.2682	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.985136	NA	NA	NA	NA	NA	NA	NA	3.0654667
1345	22	36690113	36690113	G	A	intronic	MYH9	NA	NA	NA	intronic	ENSG00000100345	NA	NA	NA	NA	NA	22q12.3	NA	NA	Name=5	NA	rs4821478	0.53	0.53	0.532	0.485623	0.662	0.2113	0.6988	0.5363	0.3671	0.66	0.24	0.68	0.58	0.5917	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.503547	NA	NA	0.681089	0.540399	NA	0.601	NA	3.065211
1345	1	248113121	248113121	C	A	intronic	OR2L13	NA	NA	NA	intronic	ENSG00000196071	NA	NA	NA	NA	NA	1q44	NA	NA	NA	NA	rs12030937	0.31	0.31	0.286	0.32508	0.2942	0.4216	0.353	0.1906	0.4192	0.3	0.39	0.38	0.16	0.3369	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.581334	NA	NA	0.303792	0.188465	NA	0.167	NA	3.065108
1346	18	12678486	12678486	A	G	intronic	CEP76,PSMG2	NA	NA	NA	ncRNA_intronic	ENSG00000267411	NA	NA	NA	NA	NA	18p11.21	NA	NA	NA	NA	rs12966424	0.34	0.34	0.324	0.30631	0.4334	0.3026	0.2882	0.2927	0.2106	0.46	0.27	0.3	0.28	0.4005	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.117097	NA	NA	0.434798	0.320848	NA	0.435	NA	3.0646353
1346	19	44128437	44128437	A	G	intronic	CADM4	NA	NA	NA	intronic	ENSG00000105767	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs2240633	0.3	0.3	0.279	0.323682	0.3131	0.2679	0.232	0.3699	0.3947	0.32	0.27	0.23	0.36	0.3171	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.155944	NA	NA	0.305581	0.353088	NA	0.312	NA	3.064219
1346	6	43538208	43538208	T	C	intronic	XPO5	NA	NA	NA	intronic	ENSG00000124571	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs35642078	0.34	0.34	0.329	0.308706	0.3221	0.62	0.3084	0.062	0.3078	0.33	0.62	0.29	0.07	0.3174	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.835705	NA	NA	0.296492	0.1038	NA	0.319	NA	3.064008
1346	1	22408106	22408106	G	A	intronic	CDC42	NA	NA	NA	intronic	ENSG00000070831	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs2501282	0.97	0.97	0.972	0.971645	0.9364	0.999	0.9741	0.9992	0.9407	0.93	1	0.97	1	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.407422	NA	NA	NA	NA	NA	0.986	NA	3.0636
1346	15	34140735	34140735	A	G	intronic	RYR3	NA	NA	NA	intronic	ENSG00000198838	NA	NA	NA	NA	NA	15q14	NA	NA	NA	NA	rs2278314	0.85	0.85	0.835	0.864816	0.9364	0.7073	0.9236	0.857	0.9223	0.94	0.69	0.91	0.85	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.733602	2.733602	NA	NA	NA	NA	0.906	NA	3.0636
1346	14	74991959	74991959	T	C	intronic	LTBP2	NA	NA	NA	intronic	ENSG00000119681	NA	NA	NA	NA	NA	14q24.3	NA	NA	NA	NA	rs862030	0.4	0.4	0.398	0.43151	0.2952	0.3373	0.4236	0.6475	0.3824	0.31	0.38	0.37	0.59	0.3433	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.183937	NA	NA	0.297907	0.595778	NA	0.399	NA	3.063593
1346	1	22832743	22832743	A	T	intronic	ZBTB40	NA	NA	NA	intronic	ENSG00000184677	NA	NA	NA	Score=378;Name=lod=46	NA	1p36.12	NA	NA	NA	NA	rs209732	0.8	0.8	0.805	0.799121	0.6272	0.8929	0.7997	0.9357	0.6943	0.64	0.91	0.77	0.93	0.6929	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.126342	2.126342	NA	0.616395	0.885837	NA	0.732	NA	3.063505
1346	6	117737390	117737390	G	A	intronic	ROS1	NA	NA	NA	intronic	ENSG00000047936	NA	NA	NA	NA	NA	6q22.1	NA	NA	NA	NA	rs2243	0.39	0.39	0.39	0.457069	0.3062	0.4395	0.2867	0.6021	0.5552	0.3	0.43	0.3	0.57	0.3555	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.044846	NA	NA	0.275064	0.546776	NA	0.442	NA	3.063236
1346	3	136035737	136035737	A	G	intronic	PCCB	NA	NA	NA	intronic	ENSG00000114054	NA	NA	NA	NA	NA	3q22.3	NA	NA	NA	NA	rs9833162	0.26	0.26	0.273	0.286342	0.3032	0.0089	0.2017	0.5287	0.2873	0.3	0.01	0.23	0.52	0.3045	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.467022	NA	NA	0.329419	0.504993	NA	0.333	NA	3.062881
1346	2	20025978	20025978	T	C	intergenic	OSR1,FLJ12334	dist=467606;dist=42637	NA	NA	upstream	ENSG00000213403	NA	NA	NA	NA	NA	2p24.1	NA	NA	NA	NA	rs6727158	0.69	0.69	0.692	0.730631	0.4374	0.9276	0.6254	0.8812	0.7004	0.45	0.93	0.58	0.85	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.187281	NA	NA	NA	NA	NA	0.659	NA	3.0626
1346	12	31267744	31267744	A	C	intergenic	DDX11,FAM60A	dist=10019;dist=165776	NA	NA	ncRNA_intronic	ENSG00000177359	NA	NA	NA	NA	NA	12p11.21	NA	NA	NA	NA	rs7968684	0.5	0.5	0.516	0.637181	0.4284	0.8294	0.6095	0.7133	0.5706	0.3	0.74	0.51	0.53	0.5091	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.242634	NA	NA	NA	NA	NA	0.21	NA	3.0625
1346	17	45479446	45479446	A	C	intronic	EFCAB13	NA	NA	NA	intronic	ENSG00000178852	NA	NA	NA	NA	NA	17q21.32	NA	NA	NA	NA	rs12452315	0.4	0.4	0.392	0.400958	0.4632	0.2609	0.3429	0.4939	0.3967	0.47	0.27	0.4	0.43	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.190483	NA	NA	0.474595	0.473852	NA	0.37	NA	3.062205
1346	6	168479604	168479604	G	A	exonic	FRMD1	NA	synonymous SNV	FRMD1:NM_024919:exon1:c.C171T:p.L57L	exonic	ENSG00000153303	NA	synonymous SNV	ENSG00000153303:ENST00000283309:exon1:c.C171T:p.L57L,ENSG00000153303:ENST00000468647:exon2:c.C288T:p.L96L,ENSG00000153303:ENST00000509157:exon2:c.C288T:p.L96L,ENSG00000153303:ENST00000511714:exon2:c.C297T:p.L99L	NA	NA	6q27	NA	NA	NA	NA	rs34054991	0.84	0.84	0.861	0.843251	0.8678	0.8234	0.7666	0.8321	0.908	0.87	0.85	0.75	0.86	0.8533	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.569938	NA	NA	0.883605	0.841353	NA	0.674	NA	3.0619616
1346	18	57000303	57000303	G	A	intronic	LMAN1	NA	NA	NA	intronic	ENSG00000074695	NA	NA	NA	NA	NA	18q21.32	NA	NA	NA	NA	rs2298712	0.31	0.31	0.317	0.35603	0.3121	0.2778	0.1844	0.4879	0.4254	0.31	0.27	0.21	0.46	0.3163	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.106731	NA	NA	0.309651	0.427372	NA	0.413	NA	3.061949
1346	7	154172154	154172154	G	A	intronic	DPP6	NA	NA	NA	intronic	ENSG00000130226	NA	NA	NA	NA	NA	7q36.2	NA	NA	NA	NA	rs3750042	0.26	0.26	0.259	0.273562	0.33	0.0923	0.245	0.3502	0.319	0.33	0.1	0.26	0.34	0.2923	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.708218	NA	NA	0.315758	0.328806	NA	0.246	NA	3.061942
1346	7	35930260	35930260	G	T	intronic	SEPT7	NA	NA	NA	intronic	ENSG00000122545	NA	NA	NA	NA	NA	7p14.2	NA	NA	NA	NA	rs28522781	0.35	0.35	0.327	0.302316	0.3131	0.3849	0.232	0.3661	0.1697	0.29	0.44	0.28	0.37	0.303	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.705682	1.705682	NA	0.32226	0.37583	NA	0.225	NA	3.06164
1346	7	42977091	42977091	G	A	exonic	MRPL32	NA	synonymous SNV	MRPL32:NM_031903:exon3:c.G483A:p.T161T	exonic	ENSG00000106591	NA	synonymous SNV	ENSG00000106591:ENST00000223324:exon3:c.G483A:p.T161T	NA	NA	7p14.1	NA	NA	NA	NA	rs631132	0.86	0.86	0.84	0.850839	0.8718	0.9107	0.7637	0.7837	0.9202	0.88	0.91	0.82	0.79	0.8686	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.88983	NA	NA	0.864651	0.790513	NA	0.891	NA	3.0616156
1346	2	24398281	24398281	T	G	intronic	FAM228A	NA	NA	NA	intronic	ENSG00000186453,ENSG00000266118	NA	NA	NA	NA	NA	2p23.3	NA	NA	NA	NA	rs2042467	0.86	0.86	0.823	0.854633	0.9384	0.9286	0.9366	0.6165	0.956	0.94	0.93	0.93	0.61	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.608778	NA	NA	NA	NA	NA	0.819	NA	3.0616
1346	20	8741027	8741027	C	T	intronic	PLCB1	NA	NA	NA	intronic	ENSG00000182621	NA	NA	NA	NA	NA	20p12.3	NA	NA	NA	NA	rs2064286	0.29	0.29	0.305	0.313498	0.3201	0.3175	0.2363	0.2958	0.3814	0.3	0.3	0.3	0.27	0.3055	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.449885	1.449885	NA	0.313315	0.28422	NA	0.326	NA	3.061085
1346	16	21730449	21730449	C	T	intronic	OTOA	NA	NA	NA	intronic	ENSG00000155719	NA	NA	NA	NA	NA	16p12.2	NA	NA	NA	NA	rs215901	0.57	0.57	0.579	0.576677	0.6382	0.5069	0.5346	0.5598	0.638	0.63	0.52	0.55	0.56	0.632	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.39295	NA	NA	0.668721	0.587085	ID=COSM148048;OCCURENCE=1(stomach)	0.674	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000041224.1;CLNDSDB=.;CLNDSDBID=.	3.061079
1346	5	44113480	44113480	G	C	intergenic	NNT,FGF10	dist=407812;dist=191617	NA	NA	intergenic	ENSG00000212561,ENSG00000070193	dist=46647;dist=190166	NA	NA	NA	NA	5p12	NA	NA	NA	NA	rs10039542	0.37	0.37	0.318	0.391174	0.2724	0.4643	0.5058	0.3578	0.4018	0.27	0.42	0.49	0.37	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.268342	NA	NA	NA	NA	NA	0.5	NA	3.0609334
1346	17	10434925	10434925	T	C	intronic	MYH2	NA	NA	NA	ncRNA_intronic	ENSG00000214970	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs3744565	0.5	0.5	0.485	0.510184	0.3847	0.8333	0.513	0.2784	0.6176	0.38	0.86	0.51	0.27	0.4794	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.657133	NA	NA	0.408605	0.31094	NA	0.522	NA	3.0606283
1346	11	64913165	64913165	G	A	intergenic	SYVN1,SPDYC	dist=11162;dist=24542	NA	NA	ncRNA_exonic	ENSG00000254455	NA	NA	NA	NA	NA	11q13.1	NA	NA	NA	NA	rs1149569	0.88	0.88	0.871	0.838658	0.9394	0.9335	0.9078	0.7262	0.7403	0.94	0.91	0.9	0.73	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.06837	NA	NA	NA	NA	NA	0.884	NA	3.0606
1346	14	20404767	20404767	A	G	UTR3	OR4K1	NM_001004063:c.*6A>G	NA	NA	UTR3	ENSG00000155249	ENST00000285600:c.*6A>G	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs2792145	0.41	0.41	0.376	0.393171	0.4284	0.6121	0.4597	0.1286	0.4417	0.41	0.61	0.46	0.16	0.4372	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.661254	NA	NA	0.407674	0.183613	NA	0.297	NA	3.0600594
1346	5	16681966	16681966	G	A	intronic	MYO10	NA	NA	NA	intronic	ENSG00000145555	NA	NA	NA	NA	NA	5p15.1	NA	NA	NA	NA	rs399833	0.34	0.34	0.362	0.386382	0.2753	0.2073	0.2882	0.6558	0.3906	0.26	0.23	0.31	0.62	0.3528	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.078463	NA	NA	0.311905	0.595585	NA	0.478	NA	3.059995
1346	20	6069562	6069562	C	T	intronic	FERMT1	NA	NA	NA	intronic	ENSG00000101311	NA	NA	NA	NA	NA	20p12.3	NA	NA	NA	NA	rs6117076	0.31	0.31	0.289	0.309904	0.3191	0.2927	0.2925	0.2194	0.453	0.32	0.3	0.36	0.25	0.3157	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.01823	NA	NA	0.305233	0.233772	NA	0.196	NA	3.059967
1346	7	150557748	150557748	G	A	intronic	ABP1	NA	NA	NA	intronic	ENSG00000002726	NA	NA	NA	NA	NA	7q36.1	NA	NA	NA	NA	rs3735076	0.42	0.42	0.443	0.454073	0.2724	0.4802	0.3991	0.5446	0.5307	0.29	0.51	0.41	0.54	0.3691	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.801302	NA	NA	0.298746	0.455603	ID=COSN168224;OCCURENCE=1(large_intestine)	0.486	NA	3.059754
1346	3	122821478	122821478	T	A	intronic	PDIA5	NA	NA	NA	intronic	ENSG00000065485	NA	NA	NA	NA	NA	3q21.1	NA	NA	NA	NA	rs2241962	0.69	0.69	0.769	0.777157	0.9404	0.7738	0.8012	0.6536	0.7628	0.8	0.67	0.68	0.56	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.530954	NA	NA	NA	NA	NA	0.623	NA	3.0596
1346	4	6374189	6374189	A	G	intronic	PPP2R2C	NA	NA	NA	intronic	ENSG00000074211	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs6837903	0.93	0.93	0.922	0.936302	0.9404	1	0.9452	0.8396	0.9908	0.94	1	0.94	0.84	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.36981	NA	NA	NA	NA	NA	0.935	NA	3.0596
1346	16	69377553	69377553	A	G	intronic	TMED6	NA	NA	NA	intronic	ENSG00000157315,ENSG00000259900,ENSG00000260371	NA	NA	NA	NA	NA	16q22.1	NA	NA	NA	NA	rs153060	0.3	0.3	0.261	0.282548	0.331	0.4187	0.353	0.0605	0.3425	0.34	0.41	0.35	0.07	0.3161	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.129757	NA	NA	0.293488	0.101683	ID=COSM148096;OCCURENCE=1(stomach)	0.181	NA	3.059412
1346	18	46384073	46384073	A	G	intronic	CTIF	NA	NA	NA	intronic	ENSG00000134030	NA	NA	NA	NA	NA	18q21.1	NA	NA	NA	NA	rs937021	0.42	0.42	0.444	0.385583	0.4573	0.2292	0.4683	0.5545	0.1861	0.46	0.21	0.47	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.66299	NA	NA	0.483344	0.544798	ID=COSN165655;OCCURENCE=1(breast)	0.428	NA	3.059356
1346	7	154672679	154672679	A	T	intronic	DPP6	NA	NA	NA	intronic	ENSG00000130226	NA	NA	NA	NA	NA	7q36.2	NA	NA	NA	NA	rs3817520	0.42	0.42	0.37	0.423522	0.2883	0.5625	0.4856	0.5	0.272	0.28	0.54	0.44	0.46	0.3623	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.951775	NA	NA	0.290176	0.451754	NA	0.37	NA	3.059224
1346	2	231327291	231327291	A	G	intronic	SP100	NA	NA	NA	intronic	ENSG00000067066	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs1649863	0.22	0.22	0.209	0.262181	0.3171	0.1766	0.17	0.118	0.5542	0.31	0.17	0.19	0.15	0.3194	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.229219	NA	NA	0.304525	0.140896	NA	0.174	NA	3.058975
1346	1	91683648	91683648	G	A	intergenic	ZNF644,HFM1	dist=195836;dist=42675	NA	NA	intergenic	ENSG00000232393,ENSG00000162669	dist=193287;dist=42675	NA	NA	NA	NA	1p22.2	NA	NA	NA	NA	rs12563349	0.21	0.21	0.183	0.210863	0.2744	0.2778	0.1758	0.0303	0.3456	0.27	0.29	0.17	0.04	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.294868	NA	NA	NA	NA	NA	0.225	NA	3.0589334
1346	8	41553835	41553835	G	A	intronic	ANK1	NA	NA	NA	intronic	ENSG00000029534	NA	NA	NA	NA	NA	8p11.21	NA	NA	NA	NA	rs2304883	0.31	0.31	0.317	0.307708	0.3042	0.2966	0.2911	0.3472	0.2812	0.3	0.3	0.27	0.36	0.3072	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.300014	NA	NA	0.329787	0.352941	NA	0.42	NA	3.058813
1346	17	10411632	10411632	A	G	intronic	MYH1	NA	NA	NA	ncRNA_intronic	ENSG00000214970	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs35152572	0.51	0.51	0.478	0.523163	0.3708	0.8631	0.5173	0.2995	0.636	0.38	0.87	0.51	0.28	0.4885	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.070736	NA	NA	0.415755	0.323944	NA	0.587	NA	3.0582783
1346	6	44147337	44147337	C	T	intronic	CAPN11	NA	NA	NA	intronic	ENSG00000137225	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs56277421	0.23	0.23	0.206	0.179513	0.3708	0.1637	0.2104	0.025	0.1861	0.37	0.2	0.24	0.04	0.2607	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.791498	1.791498	NA	0.310278	0.077582	NA	0.232	NA	3.058222
1346	2	1499728	1499728	C	T	intronic	TPO	NA	NA	NA	intronic	ENSG00000115705	NA	NA	NA	NA	NA	2p25.3	NA	NA	NA	NA	rs2276704	0.28	0.28	0.262	0.272764	0.3052	0.2718	0.2925	0.2065	0.316	0.3	0.29	0.3	0.22	0.3248	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.72833	NA	NA	0.312282	0.224467	NA	0.283	NA	3.057718
1346	19	12014355	12014355	C	G	intronic	ZNF69	NA	NA	NA	intronic	ENSG00000198429	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs11671654	0.37	0.37	0.3	0.357628	0.492	0.5238	0.4092	0.025	0.4611	0.48	0.48	0.41	0.03	0.4505	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.917605	NA	NA	NA	NA	NA	0.428	NA	3.0575
1346	5	136975687	136975687	G	A	intronic	KLHL3	NA	NA	NA	intronic	ENSG00000146021	NA	NA	NA	NA	NA	5q31.2	NA	NA	NA	NA	rs2074348	0.4	0.4	0.407	0.396166	0.3091	0.4891	0.2896	0.5083	0.3139	0.31	0.51	0.3	0.47	0.3341	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.265808	NA	NA	0.299419	0.48434	NA	0.319	NA	3.057381
1346	6	29786005	29786005	C	T	intergenic	LOC554223,HLA-G	dist=20421;dist=8751	NA	NA	intergenic	ENSG00000237042,ENSG00000204632	dist=5532;dist=8739	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs1736950	0.24	0.24	0.246	0.249002	0.2763	0.1121	0.2565	0.2625	0.3384	0.28	0.15	0.23	0.3	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.598919	NA	NA	NA	NA	NA	0.261	NA	3.0570334
1346	22	23145702	23145702	G	A	intergenic	GGTLC2,MIR650	dist=155334;dist=19568	NA	NA	intergenic	ENSG00000211668,ENSG00000211669	dist=10206;dist=8542	NA	NA	NA	NA	22q11.22	NA	NA	NA	NA	rs62220432	0.18	0.18	0.151	0.186102	0.2763	0.0903	0.1686	0.1112	0.3057	0.26	0.1	0.21	0.1	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.776478	NA	NA	NA	NA	NA	0.101	NA	3.0570334
1346	19	6897392	6897392	G	A	intronic	EMR1	NA	NA	NA	intronic	ENSG00000174837	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs330879	0.46	0.46	0.457	0.478435	0.2724	0.4821	0.4438	0.7579	0.3333	0.26	0.51	0.4	0.74	0.3672	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.119016	NA	NA	0.303953	0.671357	NA	0.391	NA	3.056447
1346	22	23637200	23637200	T	C	intronic	BCR	NA	NA	NA	intronic	ENSG00000186716	NA	NA	NA	NA	NA	22q11.23	NA	NA	NA	NA	rs2239666	0.31	0.31	0.307	0.341454	0.3151	0.1984	0.3804	0.4342	0.363	0.32	0.18	0.36	0.42	0.321	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.868016	NA	NA	0.307558	0.44099	NA	0.319	NA	3.056342
1346	17	37879762	37879762	G	A	intronic	ERBB2	NA	NA	NA	intronic	ENSG00000141736	NA	NA	NA	NA	NA	17q12	NA	Name=Pol2-4H8,ZBTB7A_(SC-34508),TAF1,GABP,ELF1_(SC-631)	NA	NA	rs903506	0.49	0.49	0.51	0.451278	0.672	0.4018	0.4784	0.1914	0.6074	0.68	0.48	0.5	0.2	0.6155	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.693082	NA	NA	0.656235	0.235361	NA	0.457	NA	3.056265
1346	11	80744231	80744231	G	A	intergenic	TENM4,MIR4300	dist=1592536;dist=857552	NA	NA	intergenic	ENSG00000254437,ENSG00000254747	dist=75554;dist=519037	NA	NA	NA	NA	11q14.1	NA	NA	NA	NA	rs10897744	0.48	0.48	0.474	0.48103	0.2773	0.8046	0.3718	0.4546	0.4703	0.28	0.82	0.4	0.47	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.869823	NA	NA	NA	NA	NA	0.399	NA	3.0560334
1346	1	155753676	155753676	A	G	intronic	GON4L	NA	NA	NA	intronic	ENSG00000116580	NA	NA	NA	NA	NA	1q22	NA	NA	NA	NA	rs822019	0.84	0.84	0.83	0.819888	0.9443	0.997	0.9337	0.438	0.9448	0.95	1	0.94	0.43	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.269219	NA	NA	NA	NA	NA	0.819	NA	3.0557
1346	2	84806553	84806553	G	A	intronic	DNAH6	NA	NA	NA	intronic	ENSG00000115423	NA	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs6547569	0.98	0.98	0.981	0.97484	0.9443	0.997	0.9755	0.9962	0.954	0.96	1	0.97	1	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.203285	NA	NA	NA	NA	NA	0.978	NA	3.0557
1346	22	49609689	49609689	C	A	intergenic	LOC100128946,C22orf34	dist=315491;dist=403601	NA	NA	downstream	ENSG00000226142	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs916249	0.37	0.37	0.384	0.334465	0.4443	0.1042	0.3141	0.5696	0.1554	0.42	0.1	0.37	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.140893	NA	NA	NA	NA	NA	0.514	NA	3.0557
1346	5	39134295	39134295	C	T	intronic	FYB	NA	NA	NA	intronic	ENSG00000082074	NA	NA	NA	NA	NA	5p13.1	NA	NA	NA	NA	rs4957318	0.48	0.48	0.473	0.484425	0.3062	0.5913	0.3112	0.7708	0.2935	0.32	0.54	0.3	0.78	0.3485	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.110924	NA	NA	0.289952	0.691821	NA	0.42	NA	3.055348
1346	2	223499077	223499077	C	T	intronic	FARSB	NA	NA	NA	intronic	ENSG00000116120	NA	NA	NA	NA	NA	2q36.1	NA	NA	NA	NA	rs13410038	0.25	0.25	0.244	0.273363	0.333	0.0982	0.2522	0.2511	0.4376	0.32	0.09	0.29	0.28	0.2971	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.300747	NA	NA	0.314651	0.260554	NA	0.341	NA	3.055249
1347	8	27255080	27255080	A	G	UTR5	PTK2B	NM_173174:c.-22A>G,NM_004103:c.-22A>G,NM_173176:c.-22A>G,NM_173175:c.-22A>G	NA	NA	UTR5	ENSG00000120899	ENST00000544172:c.-22A>G,ENST00000338238:c.-22A>G,ENST00000397501:c.-22A>G,ENST00000522338:c.-22A>G,ENST00000521164:c.-22A>G,ENST00000346049:c.-22A>G,ENST00000420218:c.-22A>G,ENST00000522517:c.-22A>G,ENST00000412793:c.-22A>G,ENST00000517339:c.-22A>G	NA	NA	NA	NA	8p21.2	NA	NA	NA	NA	rs1128433	0.34	0.34	0.345	0.323482	0.4304	0.2748	0.3833	0.2269	0.3517	0.44	0.27	0.38	0.26	0.4014	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.102129	2.102129	NA	0.446628	0.252156	NA	0.275	NA	3.0549054
1347	16	80654633	80654633	G	A	intronic	CDYL2	NA	NA	NA	intronic	ENSG00000166446	NA	NA	NA	NA	NA	16q23.2	NA	NA	NA	NA	rs4889169	0.47	0.47	0.509	0.477636	0.3042	0.3393	0.513	0.8495	0.271	0.3	0.37	0.51	0.83	0.3621	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.450454	NA	NA	0.278837	0.741035	NA	0.529	NA	3.054863
1347	16	15132108	15132108	A	G	intronic	NTAN1	NA	NA	NA	intronic	ENSG00000157045,ENSG00000179889	NA	NA	NA	NA	NA	16p13.11	NA	NA	NA	NA	rs2740	0.33	0.33	0.277	0.339856	0.3062	0.37	0.5331	0.1687	0.4376	0.32	0.38	0.48	0.18	0.3383	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.189937	NA	NA	0.300698	0.206873	NA	0.406	NA	3.054802
1347	17	10399897	10399897	A	G	intronic	MYH1	NA	NA	NA	ncRNA_intronic	ENSG00000214970	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs3744563	0.51	0.51	0.472	0.523163	0.3708	0.8641	0.5173	0.2988	0.636	0.37	0.87	0.51	0.28	0.492	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.669335	NA	NA	0.416376	0.325238	NA	0.587	NA	3.0541573
1347	11	107675566	107675566	C	T	intronic	SLC35F2	NA	NA	NA	intronic	ENSG00000110660	NA	NA	NA	NA	NA	11q22.3	NA	NA	NA	NA	rs495836	0.34	0.34	0.321	0.326478	0.4761	0.1458	0.3617	0.2769	0.4008	0.48	0.15	0.41	0.3	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.139055	NA	NA	0.469745	0.318116	NA	0.362	NA	3.054155
1347	17	48692881	48692881	C	T	intronic	CACNA1G	NA	NA	NA	intronic	ENSG00000006283	NA	NA	NA	NA	NA	17q21.33	NA	NA	NA	NA	rs8066527	0.22	0.22	0.215	0.20008	0.3201	0.0615	0.1859	0.2194	0.2035	0.33	0.04	0.24	0.24	0.2842	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.765618	1.765618	NA	0.341657	0.240786	NA	0.319	NA	3.054043
1347	15	40254155	40254155	A	G	intronic	EIF2AK4	NA	NA	NA	intronic	ENSG00000128829	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs510949	0.86	0.86	0.88	0.844249	0.9463	0.7788	0.7003	0.8964	0.8384	0.95	0.77	0.77	0.9	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.591676	NA	NA	NA	NA	NA	0.877	NA	3.0537
1347	2	171239560	171239560	A	G	intronic	MYO3B	NA	NA	NA	intronic	ENSG00000071909	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	rs12471568	0.23	0.23	0.21	0.214657	0.325	0.2927	0.2493	0.0204	0.2587	0.32	0.27	0.27	0.02	0.2936	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.672584	NA	NA	0.327819	0.076294	NA	0.181	NA	3.053581
1347	8	142445055	142445055	G	C	intronic	MROH5	NA	NA	NA	ncRNA_exonic	ENSG00000271959	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs13250250	0.34	0.34	0.319	0.34984	0.4314	0.2907	0.2911	0.2958	0.4417	0.42	0.28	0.32	0.29	0.409	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.812125	NA	NA	0.439354	0.271894	NA	0.312	NA	3.0535793
1347	12	9099034	9099034	G	A	intronic	M6PR	NA	NA	NA	UTR5	ENSG00000003056	ENST00000543159:c.-34C>T	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs4140911	0.27	0.27	0.252	0.277157	0.3857	0.0397	0.4395	0.2867	0.2822	0.37	0.02	0.45	0.29	0.3428	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5.072109	5.072109	NA	0.384651	0.31094	NA	0.239	NA	3.0535157
1347	13	101294428	101294428	C	G	intronic	TMTC4	NA	NA	NA	intronic	ENSG00000125247	NA	NA	NA	NA	NA	13q32.3	NA	NA	NA	NA	rs9585476	0.38	0.38	0.348	0.391973	0.3042	0.6091	0.2435	0.3684	0.3957	0.3	0.58	0.23	0.4	0.3503	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.039688	NA	NA	0.292115	0.330875	NA	0.384	NA	3.053385
1347	8	17927248	17927248	A	C	intronic	ASAH1	NA	NA	NA	intronic	ENSG00000104763	NA	NA	NA	NA	NA	8p22	NA	NA	NA	NA	rs4921567	0.43	0.43	0.388	0.421725	0.4781	0.372	0.5735	0.2526	0.5358	0.47	0.36	0.6	0.3	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.167418	NA	NA	0.468573	0.257948	NA	0.283	NA	3.053327
1347	20	20168497	20168497	A	G	intronic	C20orf26	NA	NA	NA	intronic	ENSG00000089101	NA	NA	NA	NA	NA	20p11.23	NA	NA	NA	NA	rs2179825	0.79	0.79	0.804	0.805911	0.9473	0.4573	0.8055	0.916	0.8712	0.95	0.42	0.83	0.93	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.736227	NA	NA	NA	NA	NA	0.877	NA	3.0527
1347	17	42000838	42000838	T	G	intergenic	FAM215A,PPY	dist=5483;dist=17334	NA	NA	upstream	ENSG00000267166	NA	NA	NA	NA	NA	17q21.31	NA	NA	NA	NA	rs2700829	0.24	0.24	0.208	0.204073	0.4473	0.0962	0.2738	0.0635	0.2055	0.45	0.07	0.29	0.07	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.107555	NA	NA	NA	NA	NA	0.181	NA	3.0527
1347	10	5948638	5948638	C	T	intronic	FBXO18	NA	NA	NA	intronic	ENSG00000134452	NA	NA	NA	NA	NA	10p15.1	NA	NA	NA	NA	rs7082434	0.23	0.23	0.236	0.19349	0.3489	0.0317	0.2089	0.2428	0.1227	0.36	0.02	0.27	0.24	0.2727	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.255825	NA	NA	0.325777	0.234439	NA	0.268	NA	3.052623
1347	4	185701620	185701620	T	C	intronic	ACSL1	NA	NA	NA	intronic	ENSG00000151726	NA	NA	NA	NA	NA	4q35.1	NA	NA	NA	NA	rs7680850	0.19	0.19	0.171	0.164337	0.3499	0.0645	0.1758	0.0363	0.2413	0.36	0.07	0.22	0.04	0.261	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.771709	NA	NA	0.336628	0.078302	NA	0.174	NA	3.052472
1347	17	27904617	27904617	C	A	intronic	GIT1	NA	NA	NA	ncRNA_intronic	ENSG00000264031	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs2278217	0.41	0.41	0.405	0.386581	0.4294	0.6855	0.3876	0.0673	0.4652	0.44	0.7	0.36	0.07	0.4206	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.15518	NA	NA	0.43093	0.129369	NA	0.413	NA	3.0524033
1347	18	34324190	34324190	C	T	intronic	FHOD3	NA	NA	NA	intronic	ENSG00000134775	NA	NA	NA	NA	NA	18q12.2	NA	NA	NA	NA	rs2303509	0.27	0.27	0.245	0.302117	0.3032	0.3214	0.3646	0.1407	0.455	0.29	0.33	0.34	0.12	0.3193	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.648451	NA	NA	0.325116	0.17862	NA	0.283	NA	3.052384
1347	3	54596815	54596815	T	C	intronic	CACNA2D3	NA	NA	NA	intronic	ENSG00000157445	NA	NA	NA	NA	NA	3p14.3	NA	NA	NA	NA	rs9814659	0.28	0.28	0.273	0.246805	0.3449	0.1825	0.2882	0.2852	0.1309	0.35	0.17	0.3	0.3	0.2731	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.125771	NA	NA	0.329881	0.238134	ID=COSN166904;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.203	NA	3.052119
1347	3	65350694	65350694	A	G	intronic	MAGI1	NA	NA	NA	intronic	ENSG00000151276	NA	NA	NA	NA	NA	3p14.1	NA	NA	NA	NA	rs55638583	0.21	0.21	0.195	0.164137	0.4692	0.002	0.2334	0.0265	0.1544	0.46	0.0035	0.26	0.04	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.169787	NA	NA	0.478905	0.098174	NA	0.239	NA	3.051895
1347	10	18840919	18840919	T	A	intronic	NSUN6	NA	NA	NA	intronic	ENSG00000241058	NA	NA	NA	NA	NA	10p12.31	NA	NA	NA	NA	rs12767546	0.32	0.32	0.32	0.335463	0.3201	0.2381	0.428	0.3328	0.3896	0.34	0.26	0.41	0.3	0.3343	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.505131	NA	NA	0.293837	0.36246	NA	0.225	NA	3.051763
1347	10	24564831	24564831	C	T	intronic	KIAA1217	NA	NA	NA	intronic	ENSG00000120549	NA	NA	NA	NA	NA	10p12.2	NA	NA	NA	NA	rs10764458	0.91	0.91	0.902	0.86222	0.9483	0.7847	0.9236	0.9766	0.6554	0.96	0.77	0.93	0.98	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.06262	NA	NA	NA	NA	NA	0.891	NA	3.0517
1347	20	20140196	20140196	T	C	intronic	C20orf26	NA	NA	NA	intronic	ENSG00000089101	NA	NA	NA	NA	NA	20p11.23	NA	NA	NA	NA	rs2179823	0.79	0.79	0.814	0.808906	0.9483	0.4573	0.804	0.916	0.8865	0.95	0.42	0.83	0.94	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.423131	NA	NA	NA	NA	NA	0.891	NA	3.0517
1347	7	150437927	150437927	C	T	intronic	GIMAP1-GIMAP5,GIMAP5	NA	NA	NA	intronic	ENSG00000196329	NA	NA	NA	NA	NA	7q36.1	NA	NA	NA	NA	rs9657894	0.36	0.36	0.371	0.389976	0.3082	0.3016	0.2651	0.5688	0.4121	0.31	0.3	0.3	0.56	0.3336	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.044456	NA	NA	0.306977	0.54562	NA	0.464	NA	3.051223
1347	17	10362746	10362746	A	G	intronic	MYH4	NA	NA	NA	ncRNA_intronic	ENSG00000214970	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs2058099	0.52	0.52	0.505	0.532947	0.3708	0.8631	0.5245	0.3321	0.637	0.38	0.87	0.51	0.32	0.4939	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.247766	NA	NA	0.417442	0.350431	NA	0.601	NA	3.0511913
1347	9	33442986	33442986	A	C	intronic	AQP3	NA	NA	NA	intronic	ENSG00000165272	NA	NA	NA	NA	NA	9p13.3	NA	Name=TBP	NA	NA	rs2231231	0.7	0.7	0.683	0.680711	0.6451	0.7034	0.7161	0.7685	0.5501	0.66	0.71	0.65	0.76	0.6629	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.462875	NA	NA	0.641163	0.777349	NA	0.703	NA	3.050837
1347	6	158475941	158475941	T	C	intronic	SYNJ2	NA	NA	NA	intronic	ENSG00000078269	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs2296510	0.49	0.49	0.49	0.523562	0.498	0.4871	0.3818	0.5688	0.6268	0.51	0.45	0.42	0.54	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.432518	NA	NA	0.451288	0.541908	NA	0.565	NA	3.050712
1347	15	52515678	52515678	G	T	intronic	MYO5C	NA	NA	NA	intronic	ENSG00000128833	NA	NA	NA	NA	NA	15q21.2	NA	NA	NA	NA	rs4405492	0.68	0.68	0.664	0.650359	0.9493	0.3343	0.8314	0.5083	0.7321	0.95	0.35	0.86	0.51	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.277864	1.277864	NA	NA	NA	ID=COSN164941;OCCURENCE=1(breast)	0.717	NA	3.0507
1347	20	20150182	20150182	A	T	intronic	C20orf26	NA	NA	NA	intronic	ENSG00000089101	NA	NA	NA	NA	NA	20p11.23	NA	NA	NA	NA	rs6112802	0.78	0.78	0.786	0.805112	0.9493	0.4554	0.8012	0.9077	0.8814	0.95	0.42	0.82	0.92	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.700592	NA	NA	NA	NA	NA	0.833	NA	3.0507
1347	20	20163425	20163425	A	G	intronic	C20orf26	NA	NA	NA	intronic	ENSG00000089101	NA	NA	NA	NA	NA	20p11.23	NA	NA	NA	NA	rs6046709	0.79	0.79	0.804	0.810503	0.9493	0.4573	0.8012	0.9266	0.8814	0.95	0.42	0.82	0.95	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.046418	NA	NA	NA	NA	NA	0.891	NA	3.0507
1347	20	20163639	20163639	T	C	intronic	C20orf26	NA	NA	NA	intronic	ENSG00000089101	NA	NA	NA	NA	NA	20p11.23	NA	NA	NA	NA	rs6046710	0.79	0.79	0.813	0.810503	0.9493	0.4573	0.8012	0.9266	0.8814	0.95	0.42	0.82	0.96	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.050551	NA	NA	NA	NA	NA	0.891	NA	3.0507
1347	9	113100012	113100012	T	G	intronic	TXNDC8	NA	NA	NA	intronic	ENSG00000204193	NA	NA	NA	NA	NA	9q31.3	NA	NA	NA	NA	rs7026528	0.33	0.33	0.333	0.355431	0.3231	0.0853	0.3329	0.6778	0.2474	0.3	0.09	0.31	0.68	0.3172	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.055221	NA	NA	0.309302	0.622333	NA	0.536	NA	3.050398
1347	17	39240426	39240426	G	A	upstream	KRTAP4-7	NA	NA	NA	upstream	ENSG00000240871	NA	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs11658607	0.55	0.55	0.583	NA	NA	NA	NA	NA	NA	0.63	0.38	0.59	0.58	0.6164	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.457394	NA	NA	NA	NA	NA	0.08	NA	3.0502666
1347	17	10364191	10364191	T	C	intronic	MYH4	NA	NA	NA	ncRNA_intronic	ENSG00000214970	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs1029665	0.52	0.52	0.498	0.536342	0.3708	0.8631	0.5231	0.3449	0.638	0.38	0.87	0.51	0.33	0.495	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.046014	NA	NA	0.417442	0.359737	NA	0.609	NA	3.0500913
1347	3	49750188	49750188	T	A	intronic	RNF123	NA	NA	NA	UTR3	ENSG00000164068	ENST00000432042:c.*46T>A,ENST00000457726:c.*611T>A	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs3749240	0.61	0.61	0.579	0.597045	0.5249	0.8333	0.6484	0.4138	0.6391	0.54	0.83	0.66	0.45	0.5919	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.367628	NA	NA	NA	NA	NA	0.638	NA	3.0498667
1347	7	158591851	158591851	C	T	intronic	ESYT2	NA	NA	NA	intronic	ENSG00000117868	NA	NA	NA	NA	NA	7q36.3	NA	NA	NA	NA	rs2709855	0.93	0.93	0.938	0.927716	0.9503	0.9524	0.9294	0.8896	0.9294	0.96	0.96	0.94	0.87	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.142747	NA	NA	NA	NA	NA	0.92	NA	3.0497
1347	8	142185580	142185580	G	A	intronic	DENND3	NA	NA	NA	intronic	ENSG00000105339	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs12675070	0.3	0.3	0.311	0.28135	0.3439	0.3274	0.2176	0.1959	0.3303	0.34	0.35	0.25	0.2	0.2933	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.574208	NA	NA	0.313372	0.23468	NA	0.239	NA	3.049428
1347	7	36661423	36661423	T	C	intronic	AOAH	NA	NA	NA	intronic	ENSG00000136250	NA	NA	NA	NA	NA	7p14.2	NA	Name=GATA-2	NA	NA	rs2727822	0.64	0.64	0.626	0.639776	0.6431	0.5665	0.7089	0.6528	0.6452	0.63	0.6	0.69	0.66	0.6547	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.654931	NA	NA	0.653488	0.649342	NA	0.754	NA	3.048712
1347	14	71215729	71215729	G	A	intronic	MAP3K9	NA	NA	NA	intronic	ENSG00000006432	NA	NA	NA	NA	NA	14q24.2	NA	NA	NA	NA	rs10129495	0.32	0.32	0.312	0.297324	0.329	0.3254	0.3401	0.3101	0.1881	0.34	0.34	0.35	0.27	0.3152	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.650451	NA	NA	0.307093	0.298684	NA	0.326	NA	3.048707
1347	15	69676904	69676904	C	T	intronic	PAQR5	NA	NA	NA	intronic	ENSG00000137819	NA	NA	NA	NA	NA	15q23	NA	NA	NA	NA	rs59560663	0.82	0.82	0.744	0.852436	0.9513	0.7937	0.8689	0.73	0.9652	0.93	0.76	0.85	0.71	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.703641	NA	NA	NA	NA	NA	NA	NA	3.0487
1347	10	63995983	63995983	C	T	exonic	RTKN2	NA	synonymous SNV	RTKN2:NM_145307:exon6:c.G528A:p.V176V	exonic	ENSG00000182010	NA	synonymous SNV	ENSG00000182010:ENST00000373789:exon6:c.G528A:p.V176V,ENSG00000182010:ENST00000395265:exon6:c.G528A:p.V176V	NA	NA	10q21.2	NA	NA	NA	NA	rs3852448	0.92	0.92	0.917	0.906949	0.8579	0.9881	0.8991	0.9342	0.8425	0.86	0.99	0.89	0.93	0.8879	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.860198	NA	NA	0.872558	0.91644	NA	0.848	NA	3.0483086
1347	12	56294428	56294428	C	T	downstream	WIBG	NA	NA	NA	downstream	ENSG00000170473,ENSG00000257569	NA	NA	NA	NA	NA	12q13.2	NA	Name=Pol2	NA	NA	rs9739192	0.79	0.79	0.832	0.794928	0.7962	0.7758	0.7767	0.7814	0.8446	0.8	0.8	0.73	0.79	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.050333	NA	NA	0.822439	0.777457	NA	0.855	NA	3.0480276
1347	17	38251657	38251657	C	A	intronic	NR1D1	NA	NA	NA	intronic	ENSG00000126368	NA	NA	NA	NA	NA	17q21.1	NA	NA	NA	NA	rs72836608	0.2	0.2	0.188	0.197684	0.341	0.1716	0.183	0.0386	0.3027	0.32	0.14	0.22	0.04	0.2813	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.388837	NA	NA	0.329765	0.080572	NA	0.261	NA	3.047935
1347	11	64559898	64559898	T	C	intronic	MAP4K2	NA	NA	NA	intronic	ENSG00000168067	NA	NA	NA	NA	NA	11q13.1	NA	NA	NA	NA	rs10897526	0.41	0.41	0.373	0.423323	0.2475	0.7351	0.4798	0.2474	0.4806	0.24	0.74	0.42	0.26	0.4414	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.270025	NA	NA	0.263268	0.240682	NA	0.261	NA	3.047832
1347	9	107457759	107457759	C	T	downstream	OR13D1	NA	NA	NA	UTR3	ENSG00000179055	ENST00000318763:c.*16C>T	NA	NA	NA	NA	9q31.1	NA	NA	NA	NA	rs1364946	0.36	0.36	0.34	0.346046	0.3121	0.4504	0.4265	0.2897	0.2924	0.33	0.46	0.4	0.28	0.3413	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.138193	NA	NA	0.299209	0.31267	NA	0.261	NA	3.047391
1347	19	4332105	4332105	A	T	intronic	STAP2	NA	NA	NA	intronic	ENSG00000178078	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs7258060	0.4	0.4	0.392	0.369409	0.3002	0.5982	0.3242	0.407	0.1861	0.29	0.59	0.31	0.4	0.3267	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.316919	NA	NA	0.326163	0.374489	NA	0.319	NA	3.046937
1347	12	30877391	30877391	G	T	intronic	CAPRIN2	NA	NA	NA	intronic	ENSG00000110888	NA	NA	NA	NA	NA	12p11.21	NA	NA	NA	NA	rs7299800	0.27	0.27	0.238	0.256989	0.3161	0.2937	0.2075	0.1831	0.2935	0.31	0.3	0.23	0.19	0.299	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.407927	NA	NA	0.338023	0.219473	NA	0.203	NA	3.046877
1347	10	56287689	56287689	A	C	intronic	PCDH15	NA	NA	NA	ncRNA_intronic	ENSG00000234173	NA	NA	NA	NA	NA	10q21.1	NA	NA	NA	NA	rs10825347	0.57	0.57	0.563	0.606629	0.4006	0.756	0.4222	0.7247	0.636	0.41	0.74	0.41	0.74	0.4936	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.953588	NA	NA	0.392284	0.676848	NA	0.601	NA	3.0468493
1347	19	11409061	11409061	C	T	intronic	TSPAN16	NA	NA	NA	intronic	ENSG00000130167	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs377665	0.39	0.39	0.407	0.416334	0.2932	0.2728	0.3444	0.7194	0.3323	0.29	0.26	0.36	0.73	0.3539	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.558779	NA	NA	0.306512	0.657584	NA	0.522	NA	3.046388
1347	12	31245741	31245741	A	G	intronic	DDX11	NA	NA	NA	intronic	ENSG00000013573	NA	NA	NA	NA	NA	12p11.21	NA	NA	NA	NA	rs2075321	0.53	0.53	0.46	0.632788	0.4304	0.8095	0.6066	0.7088	0.5746	0.35	0.73	0.51	0.59	0.5236	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.685364	NA	NA	NA	NA	NA	0.138	NA	3.046
1347	11	5566789	5566789	A	G	upstream	OR52H1	NA	NA	NA	intronic	ENSG00000196565	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs12798586	0.2	0.2	0.184	0.177915	0.2783	0.0804	0.3386	0.1467	0.1033	0.27	0.1	0.31	0.13	0.2376	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.466447	NA	NA	0.271532	0.173557	NA	0.123	NA	3.0459013
1347	6	167622105	167622105	A	G	intergenic	TCP10L2,UNC93A	dist=25709;dist=82698	NA	NA	downstream	ENSG00000216966	NA	NA	NA	NA	NA	6q27	NA	NA	NA	NA	rs28661326	0.41	0.41	0.258	0.447883	0.4543	0.4871	0.3285	0.4274	0.5133	0.4	0.47	0.33	0.39	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.234249	NA	NA	NA	NA	NA	0.406	NA	3.0457
1347	19	19945780	19945780	T	C	intergenic	ZNF506,ZNF253	dist=13220;dist=30934	NA	NA	downstream	ENSG00000267419	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs11085278	0.6	0.6	0.608	0.595847	0.4543	0.8075	0.5764	0.6566	0.455	0.49	0.79	0.51	0.64	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.983373	NA	NA	NA	NA	NA	0.514	NA	3.0457
1347	9	137710961	137710961	G	A	intronic	COL5A1	NA	NA	NA	intronic	ENSG00000130635	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs10745388	0.45	0.45	0.447	0.455471	0.4543	0.4038	0.3905	0.5477	0.4315	0.46	0.38	0.4	0.52	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.206162	NA	NA	0.500629	0.537572	NA	0.572	NA	3.045071
1348	19	49967808	49967808	C	T	intronic	ALDH16A1	NA	NA	NA	intronic	ENSG00000161618,ENSG00000269469	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs34601909	0.25	0.25	0.271	0.210064	0.335	0.006	0.2277	0.3389	0.1053	0.33	0.01	0.25	0.38	0.2702	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.438507	NA	NA	0.35	0.311394	NA	0.261	NA	3.0448
1348	9	132963129	132963129	G	A	intronic	NCS1	NA	NA	NA	intronic	ENSG00000107130	NA	NA	NA	NA	NA	9q34.11	NA	NA	NA	NA	rs887535	0.95	0.95	0.945	0.939896	0.9553	1	0.9524	0.879	0.9356	0.96	1	0.95	0.86	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.820177	NA	NA	NA	NA	NA	0.884	NA	3.0447
1348	14	71209025	71209025	C	A	intronic	MAP3K9	NA	NA	NA	intronic	ENSG00000006432	NA	NA	NA	NA	NA	14q24.2	NA	NA	NA	NA	rs4902843	0.32	0.32	0.299	0.297125	0.33	0.3244	0.3401	0.3101	0.1871	0.34	0.33	0.35	0.27	0.3183	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.293547	NA	NA	0.307093	0.299138	NA	0.326	NA	3.044607
1348	2	206995010	206995010	A	G	intronic	NDUFS1	NA	NA	NA	intronic	ENSG00000023228	NA	NA	NA	NA	NA	2q33.3	NA	NA	NA	NA	rs4147725	0.33	0.33	0.325	0.307907	0.335	0.2133	0.2882	0.4501	0.1994	0.34	0.21	0.34	0.44	0.3086	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.062907	NA	NA	0.31186	0.43872	NA	0.261	NA	3.04454
1348	2	69045158	69045158	C	A	intronic	ARHGAP25	NA	NA	NA	intronic	ENSG00000163219	NA	NA	NA	NA	NA	2p13.3	NA	NA	NA	NA	rs10197806	0.33	0.33	0.355	0.286142	0.334	0.4097	0.3156	0.2277	0.1677	0.31	0.49	0.27	0.23	0.3024	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.0779	NA	NA	0.31907	0.256695	NA	0.268	NA	3.04453
1348	4	70592790	70592790	G	T	UTR3	SULT1B1	NM_014465:c.*16C>A	NA	NA	UTR3	ENSG00000173597	ENST00000310613:c.*16C>A	NA	NA	NA	NA	4q13.3	NA	NA	NA	NA	rs2292092	0.44	0.44	0.383	0.429712	0.4165	0.6002	0.5101	0.1982	0.5235	0.41	0.63	0.49	0.22	0.4536	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.246587	NA	NA	0.418818	0.250113	NA	0.362	NA	3.0444154
1348	11	123847392	123847392	G	C	downstream	OR10S1	NA	NA	NA	UTR3	ENSG00000196248	ENST00000531945:c.*11C>G	NA	NA	NA	NA	11q24.1	NA	NA	NA	NA	rs10893117	0.25	0.25	0.225	0.246605	0.3121	0.3552	0.317	0.0356	0.3027	0.32	0.33	0.27	0.05	0.3121	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.092407	NA	NA	0.331472	0.090145	NA	0.29	NA	3.044328
1348	19	53263540	53263540	T	A	intergenic	ZNF611,ZNF600	dist=25233;dist=5208	NA	NA	intergenic	ENSG00000213020,ENSG00000189190	dist=25233;dist=3908	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs11666783	0.19	0.19	0.196	0.187101	0.2893	0.0962	0.2205	0.1634	0.184	0.29	0.08	0.22	0.15	NA	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.659253	NA	NA	NA	NA	ID=COSN165913;OCCURENCE=1(breast)	0.152	NA	3.0440334
1348	11	67353844	67353844	C	T	intronic	GSTP1	NA	NA	NA	intronic	ENSG00000084207	NA	NA	NA	NA	NA	11q13.2	NA	NA	NA	NA	rs1871042	0.25	0.25	0.258	0.248203	0.333	0.1468	0.2133	0.2784	0.2495	0.32	0.14	0.22	0.29	0.2879	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.482373	NA	NA	0.335464	0.271868	NA	0.29	NA	3.043636
1348	4	89588689	89588689	C	T	intronic	HERC3	NA	NA	NA	intronic	ENSG00000138641	NA	NA	NA	NA	NA	4q22.1	NA	NA	NA	NA	rs3017921	0.48	0.48	0.495	0.534145	0.2793	0.5248	0.2882	0.8207	0.593	0.3	0.56	0.29	0.81	0.3938	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.676802	NA	NA	0.283419	0.735588	NA	0.522	NA	3.043481
1348	17	38609187	38609187	G	A	intronic	IGFBP4	NA	NA	NA	intronic	ENSG00000141753	NA	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs1009727	0.34	0.34	0.31	0.336062	0.3211	0.5298	0.3055	0.1589	0.4131	0.31	0.51	0.33	0.2	0.3227	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.116238	NA	NA	0.313023	0.210395	NA	0.232	NA	3.043177
1348	12	9242924	9242924	G	C	intronic	A2M	NA	NA	NA	intronic	ENSG00000175899	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs2193005	0.25	0.25	0.222	0.243411	0.3191	0.0764	0.3948	0.2867	0.1718	0.33	0.07	0.39	0.24	0.3062	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.737995	NA	NA	0.331553	0.270058	ID=COSN164148;OCCURENCE=1(breast)	0.341	NA	3.043147
1348	12	133778684	133778684	G	A	intronic	ZNF268	NA	NA	NA	intronic	ENSG00000090612,ENSG00000256825	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs7963812	0.29	0.29	0.294	0.296126	0.3449	0.1111	0.2565	0.447	0.2607	0.35	0.08	0.26	0.45	0.2812	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.420648	NA	NA	0.330962	0.405609	NA	0.297	NA	3.042938
1348	14	70496867	70496867	C	T	intronic	SMOC1	NA	NA	NA	intronic	ENSG00000198732	NA	NA	NA	NA	NA	14q24.2	NA	NA	NA	NA	rs227402	0.57	0.57	0.599	0.552117	0.498	0.499	0.598	0.77	0.3354	0.51	0.51	0.57	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.629415	NA	NA	0.459068	0.728986	NA	0.551	NA	3.042932
1348	8	75924820	75924820	A	C	intronic	CRISPLD1	NA	NA	NA	intronic	ENSG00000121005	NA	NA	NA	NA	NA	8q21.11	NA	NA	NA	NA	rs12115090	0.4	0.4	0.419	0.421126	0.3002	0.2946	0.2493	0.8215	0.2566	0.31	0.26	0.27	0.8	0.3465	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.285949	NA	NA	0.310842	0.726055	ID=COSN168354;OCCURENCE=1(large_intestine)	0.464	NA	3.042458
1348	4	173269638	173269638	T	C	intronic	GALNTL6	NA	NA	NA	intronic	ENSG00000174473	NA	NA	NA	NA	NA	4q34.1	NA	NA	NA	NA	rs333399	0.44	0.44	0.48	0.444888	0.3201	0.5387	0.3271	0.6596	0.2699	0.32	0.53	0.3	0.64	0.3506	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.624582	NA	NA	0.286977	0.606219	NA	0.384	NA	3.042323
1348	17	10446182	10446182	C	T	intronic	MYH2	NA	NA	NA	ncRNA_intronic	ENSG00000214970	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs719277	0.51	0.51	0.476	0.510783	0.3847	0.8333	0.5144	0.2799	0.6176	0.38	0.86	0.52	0.28	0.4994	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.41009	NA	NA	0.406942	0.30895	NA	0.5	NA	3.0422913
1348	19	4254308	4254308	T	C	intronic	CCDC94	NA	NA	NA	intronic	ENSG00000105248	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs11085067	0.43	0.43	0.43	0.466653	0.3082	0.4444	0.2781	0.6876	0.4877	0.32	0.45	0.27	0.68	0.3603	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.104073	NA	NA	0.289419	0.638448	NA	0.399	NA	3.042081
1348	4	113356259	113356259	C	T	intronic	ALPK1	NA	NA	NA	intronic	ENSG00000073331	NA	NA	NA	NA	NA	4q25	NA	NA	NA	NA	rs3815071	0.34	0.34	0.299	0.313299	0.3111	0.494	0.268	0.174	0.3497	0.34	0.49	0.28	0.19	0.3297	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.872755	NA	NA	0.317353	0.182119	NA	0.283	NA	3.041847
1348	5	162896856	162896856	T	C	intronic	HMMR	NA	NA	NA	intronic	ENSG00000072571	NA	NA	NA	NA	NA	5q34	NA	NA	NA	NA	rs299283	0.43	0.43	0.434	0.422524	0.3002	0.5288	0.33	0.5968	0.2689	0.32	0.53	0.35	0.54	0.361	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.930088	NA	NA	0.296977	0.56355	ID=COSN167631;OCCURENCE=1(large_intestine)	0.435	NA	3.041823
1348	7	156469096	156469096	C	T	intronic	RNF32	NA	NA	NA	ncRNA_exonic	ENSG00000225666	NA	NA	NA	NA	NA	7q36.3	NA	NA	NA	NA	rs2302149	0.44	0.44	0.461	0.434904	0.4205	0.4087	0.4496	0.531	0.3364	0.43	0.41	0.41	0.54	0.4364	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.576621	NA	NA	0.434737	0.506134	NA	0.065	NA	3.0416963
1348	1	1581713	1581713	A	C	intronic	CDK11B	NA	NA	NA	intronic	ENSG00000248333	NA	NA	NA	NA	NA	1p36.33	NA	NA	NA	NA	rs76922129	0.3	0.3	NA	0.249201	0.4821	0.2282	0.3256	0.0287	0.2751	0.48	0.23	0.37	0.04	NA	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.866701	NA	NA	0.47643	0.09104	NA	0.087	NA	3.04147
1348	17	21901945	21901945	G	C	intergenic	FAM27L,FLJ36000	dist=75446;dist=2117	NA	NA	intergenic	ENSG00000266806,ENSG00000266172	dist=42929;dist=2179	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs8072844	0.38	0.38	0.338	0.38738	0.2922	0.5873	0.3991	0.3707	0.2935	0.29	0.55	0.36	0.35	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.660452	NA	NA	NA	NA	NA	0.29	NA	3.0411334
1348	1	110200360	110200360	T	C	intronic	GSTM4	NA	NA	NA	intronic	ENSG00000168765	NA	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	rs560018	0.19	0.19	0.159	0.154952	0.328	0.0466	0.2262	0.0938	0.1207	0.33	0.04	0.24	0.1	0.265	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.460179	NA	NA	0.366047	0.129369	NA	0.188	NA	3.040953
1348	19	10079013	10079013	G	C	intronic	COL5A3	NA	NA	NA	intronic	ENSG00000080573	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs3815747	0.29	0.29	0.284	0.307508	0.3082	0.3482	0.2248	0.2398	0.4151	0.3	0.37	0.23	0.22	0.3197	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.630103	NA	NA	0.331395	0.258965	NA	0.232	NA	3.040705
1348	3	120428621	120428621	T	C	intronic	RABL3	NA	NA	NA	intronic	ENSG00000144840	NA	NA	NA	NA	NA	3q13.33	NA	NA	NA	NA	rs11720353	0.23	0.23	0.221	0.201677	0.3419	0.127	0.2233	0.18	0.1483	0.35	0.15	0.23	0.16	0.2806	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.658089	1.658089	NA	0.337326	0.205402	NA	0.326	NA	3.040174
1348	17	21901936	21901936	C	T	intergenic	FAM27L,FLJ36000	dist=75437;dist=2126	NA	NA	intergenic	ENSG00000266806,ENSG00000266172	dist=42920;dist=2188	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs8068925	0.38	0.38	0.301	0.387181	0.2932	0.5883	0.4006	0.3691	0.2914	0.29	0.55	0.36	0.35	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.601091	NA	NA	NA	NA	NA	NA	NA	3.0401334
1348	11	1078393	1078393	T	C	intronic	MUC2	NA	NA	NA	intronic	ENSG00000198788	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs7104590	0.43	0.43	0.45	0.436102	0.3131	0.4435	0.1974	0.8026	0.229	0.33	0.41	0.2	0.8	0.3334	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.61221	NA	NA	0.313442	0.711943	NA	0.341	NA	3.040058
1348	7	121059871	121059871	G	A	intergenic	FAM3C,PTPRZ1	dist=23449;dist=453288	NA	NA	ncRNA_exonic	ENSG00000227371	NA	NA	NA	NA	NA	7q31.31	NA	NA	NA	NA	rs2707500	0.73	0.73	0.698	0.678115	0.9602	0.7341	0.7738	0.2474	0.8446	0.97	0.76	0.79	0.27	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.482131	NA	NA	NA	NA	NA	0.667	NA	3.0398
1348	15	62374593	62374593	C	T	intergenic	C2CD4A,C2CD4B	dist=11477;dist=81144	NA	NA	downstream	ENSG00000259466	NA	NA	NA	NA	NA	15q22.2	NA	NA	NA	NA	rs1436963	0.43	0.43	0.375	0.408347	0.4602	0.3671	0.6037	0.3215	0.3763	0.47	0.37	0.56	0.33	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.681306	NA	NA	NA	NA	NA	0.312	NA	3.0398
1348	16	78143607	78143607	C	T	intronic	WWOX	NA	NA	NA	intronic	ENSG00000186153	NA	NA	NA	NA	NA	16q23.1	NA	NA	NA	NA	rs2287972	0.46	0.46	0.443	0.466254	0.493	0.6667	0.5403	0.1513	0.6053	0.49	0.65	0.49	0.15	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.133651	NA	NA	0.467316	0.210983	NA	0.413	NA	3.039684
1348	6	142724918	142724918	C	T	intronic	GPR126	NA	NA	NA	intronic	ENSG00000112414	NA	NA	NA	NA	NA	6q24.1	NA	NA	NA	NA	rs9496369	0.43	0.43	0.464	0.456869	0.3181	0.4058	0.3703	0.7557	0.3098	0.29	0.38	0.36	0.76	0.353	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.887797	NA	NA	0.289777	0.668778	NA	0.326	NA	3.039123
1348	17	79411662	79411662	G	A	intronic	BAHCC1	NA	NA	NA	intronic	ENSG00000171282	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs11655860	0.22	0.22	0.194	0.188898	0.3539	0.004	0.2133	0.2239	0.1452	0.37	0.0017	0.28	0.19	0.2746	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.514883	NA	NA	0.332409	0.239723	NA	0.13	NA	3.039091
1348	15	51502986	51502986	G	A	UTR3	CYP19A1	NM_000103:c.*19C>T,NM_031226:c.*19C>T	NA	NA	ncRNA_UTR3	ENSG00000137869	NA	NA	NA	NA	NA	15q21.2	NA	NA	NA	NA	rs10046	0.41	0.41	0.41	0.362819	0.4881	0.5218	0.3444	0.2118	0.2873	0.5	0.53	0.35	0.19	0.4492	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.390565	NA	NA	0.52376	0.255237	NA	0.341	NA	3.03894
1348	10	104242886	104242886	G	A	intronic	ACTR1A	NA	NA	NA	intronic	ENSG00000138107	NA	NA	NA	NA	NA	10q24.32	NA	NA	NA	NA	rs2296581	0.28	0.28	0.27	0.271366	0.3002	0.256	0.3573	0.1982	0.2955	0.31	0.28	0.33	0.21	0.3282	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.983423	NA	NA	0.332791	0.243985	ID=COSN163751;OCCURENCE=1(NS)	0.312	NA	3.038809
1348	3	64527378	64527378	G	A	intronic	ADAMTS9	NA	NA	NA	intronic	ENSG00000163638	NA	NA	NA	NA	NA	3p14.1	NA	NA	NA	NA	rs1036918	0.8	0.8	0.785	0.803914	0.9612	0.7788	0.6643	0.6437	0.9836	0.96	0.79	0.71	0.62	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.207002	NA	NA	NA	NA	NA	0.797	NA	3.0388
1348	6	73821239	73821239	T	C	intronic	KCNQ5	NA	NA	NA	intronic	ENSG00000185760	NA	NA	NA	NA	NA	6q13	NA	NA	NA	NA	rs2000205	0.95	0.95	0.95	0.944888	0.9612	0.9534	0.9683	0.888	0.9796	0.96	0.95	0.97	0.91	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.94425	NA	NA	NA	NA	NA	0.957	NA	3.0388
1348	17	6560977	6560977	C	A	upstream	ALOX15P1	NA	NA	NA	intergenic	ENSG00000264468,ENSG00000141485	dist=2149;dist=27055	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs1808213	0.57	0.57	0.59	0.602436	0.4612	0.7073	0.5634	0.6626	0.5859	0.45	0.68	0.54	0.66	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.516974	NA	NA	NA	NA	NA	0.725	NA	3.0388
1348	7	142197897	142197897	C	T	intergenic	LOC730441,MTRNR2L6	dist=225829;dist=176234	NA	NA	ncRNA_intronic	ENSG00000241657	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs17279	0.42	0.42	0.438	0.427117	0.3151	0.5347	0.3631	0.4788	0.407	0.31	0.58	0.35	0.47	0.3401	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.630401	NA	NA	0.306369	0.433029	NA	0.312	NA	3.038431
1348	19	12385749	12385749	C	T	intronic	ZNF44	NA	NA	NA	intronic	ENSG00000197857	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs2459040	0.39	0.39	0.406	0.390575	0.2942	0.2946	0.2594	0.6899	0.2771	0.3	0.34	0.29	0.68	0.3499	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.35151	NA	NA	0.317715	0.602186	NA	0.435	NA	3.038185
1348	17	29226630	29226630	T	A	intronic	TEFM	NA	NA	NA	UTR3	ENSG00000172171	ENST00000580840:c.*765A>T	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs28539246	0.42	0.42	0.421	0.479433	0.4026	0.2331	0.4121	0.8101	0.4131	0.37	0.23	0.43	0.72	0.4035	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.772404	NA	NA	0.322782	0.664568	NA	0.522	NA	3.0377847
1348	3	37627149	37627149	G	A	intronic	ITGA9	NA	NA	NA	intronic	ENSG00000144668	NA	NA	NA	NA	NA	3p22.2	NA	NA	NA	NA	rs1155742	0.32	0.32	0.308	0.259984	0.3221	0.4891	0.1988	0.1399	0.1656	0.32	0.51	0.23	0.16	0.2865	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.600922	NA	NA	0.354596	0.171804	NA	0.268	NA	3.036804
1348	9	78820011	78820011	G	A	intronic	PCSK5	NA	NA	NA	intronic	ENSG00000099139	NA	NA	NA	NA	NA	9q21.13	NA	NA	NA	NA	rs7851394	0.98	0.98	0.979	0.965455	0.9632	0.999	0.9769	0.9811	0.9039	0.97	1	0.98	0.97	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.590089	NA	NA	NA	NA	NA	0.978	NA	3.0368
1348	16	81062171	81062171	C	T	intronic	CENPN	NA	NA	NA	ncRNA_intronic	ENSG00000260213	NA	NA	NA	Score=489;Name=lod=129	NA	16q23.2	NA	NA	NA	NA	rs2602428	0.66	0.66	0.66	0.664936	0.7734	0.5605	0.6542	0.5545	0.818	0.77	0.56	0.65	0.59	0.7301	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.754881	1.754881	NA	0.793036	0.590833	NA	0.717	NA	3.0367973
1348	1	110279821	110279821	C	A	intronic	GSTM3	NA	NA	NA	ncRNA_intronic	ENSG00000241720	NA	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	rs1537234	0.49	0.49	0.458	0.486821	0.4135	0.8611	0.5216	0.1589	0.5951	0.43	0.85	0.48	0.16	0.4648	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.987876	NA	NA	0.418256	0.223786	NA	0.471	NA	3.0367773
1348	15	90169331	90169331	A	G	intronic	TICRR	NA	NA	NA	intronic	ENSG00000140534	NA	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs55653159	0.26	0.26	0.248	0.269169	0.331	0.3919	0.2839	0.059	0.3528	0.34	0.34	0.25	0.06	0.3015	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.748895	NA	NA	0.330891	0.095	NA	0.261	NA	3.036609
1348	4	89711849	89711849	T	C	intronic	FAM13A	NA	NA	NA	intronic	ENSG00000138640	NA	NA	NA	NA	NA	4q22.1	NA	NA	NA	NA	rs2290782	0.6	0.6	0.583	0.614417	0.4851	0.7004	0.5519	0.6558	0.6472	0.49	0.71	0.53	0.67	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.632975	NA	NA	0.478316	0.610549	NA	0.674	NA	3.036584
1348	6	42883911	42883911	G	C	intronic	PTCRA	NA	NA	NA	intronic	ENSG00000171611	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs2235831	0.36	0.36	0.398	0.398562	0.3231	0.1379	0.3055	0.7027	0.3998	0.32	0.14	0.31	0.7	0.3302	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.421526	NA	NA	0.310233	0.631185	NA	0.464	NA	3.036467
1348	1	151341703	151341703	G	A	intronic	SELENBP1	NA	NA	NA	intronic	ENSG00000143416	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs55906289	0.18	0.18	0.189	0.147764	0.3598	NA	0.196	0.0915	0.1237	0.35	NA	0.23	0.1	0.2566	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.277549	NA	NA	0.347523	0.1401	NA	0.225	NA	3.036077
1348	6	6196141	6196141	G	A	intronic	F13A1	NA	NA	NA	intronic	ENSG00000124491	NA	NA	NA	NA	NA	6p25.1	NA	NA	NA	NA	rs5978	0.22	0.22	0.236	0.263978	0.3111	0.2361	0.2363	0.1029	0.4816	0.31	0.22	0.19	0.09	0.3207	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.037607	NA	NA	0.332326	0.140717	NA	0.174	NA	3.035874
1348	10	38894500	38894500	T	C	intergenic	LOC399744,ACTR3BP5	dist=153419;dist=95227	NA	NA	upstream	ENSG00000215151	NA	NA	NA	NA	NA	10p11.1	NA	NA	NA	NA	rs3970150	0.41	0.41	0.335	0.457069	0.4642	0.5258	0.5043	0.5015	0.2853	0.4	0.44	0.42	0.41	NA	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.025358	NA	NA	NA	NA	NA	NA	NA	3.0358
1348	16	28896015	28896015	C	T	intronic	ATP2A1	NA	NA	NA	intronic	ENSG00000196296	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs11642449	0.25	0.25	0.215	0.247404	0.3002	0.126	0.4726	0.2224	0.1922	0.31	0.13	0.37	0.2	0.3258	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.913138	NA	NA	0.338256	0.25888	NA	0.145	NA	3.035744
1348	1	197008597	197008597	A	C	intronic	F13B	NA	NA	NA	intronic	ENSG00000143278	NA	NA	NA	NA	NA	1q31.3	NA	NA	NA	NA	rs5990	0.54	0.54	0.504	0.52496	0.501	0.8194	0.6455	0.1921	0.6104	0.5	0.81	0.61	0.22	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.010601	NA	NA	0.463476	0.226156	NA	0.486	NA	3.035524
1349	1	224482216	224482216	T	C	intronic	NVL	NA	NA	NA	intronic	ENSG00000143748	NA	NA	NA	NA	NA	1q42.11	NA	NA	NA	NA	rs2404783	0.85	0.85	0.831	0.821286	0.9652	0.8899	0.9323	0.531	0.9162	0.97	0.9	0.93	0.56	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.136916	3.136916	NA	NA	NA	NA	0.826	NA	3.0348
1349	7	64437406	64437406	A	G	UTR3	ZNF117	NM_015852:c.*1091T>C	NA	NA	downstream	ENSG00000152926	NA	NA	NA	NA	NA	7q11.21	NA	NA	NA	NA	rs4607487	0.88	0.88	0.875	0.881789	0.9652	0.873	0.9395	0.7284	0.9714	0.96	0.88	0.94	0.72	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.936708	1.936708	0.43	NA	NA	NA	0.891	NA	3.0348
1349	8	90970935	90970935	G	A	intronic	NBN	NA	NA	NA	intronic	ENSG00000104320	NA	NA	NA	NA	NA	8q21.3	NA	NA	NA	NA	rs2234744	0.33	0.33	0.292	0.353035	0.3072	0.4663	0.3761	0.2156	0.453	0.31	0.46	0.34	0.2	0.3446	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.02164	NA	NA	0.313488	0.227871	NA	0.333	NA	3.034712
1349	12	117685138	117685138	T	C	intronic	NOS1	NA	NA	NA	intronic	ENSG00000089250	NA	NA	NA	NA	NA	12q24.22	NA	NA	NA	NA	rs2291908	0.37	0.37	0.327	0.353035	0.3161	0.5109	0.5259	0.1982	0.3149	0.33	0.48	0.5	0.19	0.3465	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.362978	NA	NA	0.302895	0.174807	NA	0.37	NA	3.034505
1349	3	58194051	58194051	C	A	intronic	DNASE1L3	NA	NA	NA	intronic	ENSG00000163687	NA	NA	NA	NA	NA	3p14.3	NA	NA	NA	NA	rs3732631	0.3	0.3	0.301	0.270767	0.3161	0.3542	0.3501	0.146	0.2505	0.33	0.36	0.33	0.16	0.3148	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.652115	NA	NA	0.334651	0.176804	ID=COSN166909;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.399	NA	3.034449
1349	1	157740189	157740189	A	G	intronic	FCRL2	NA	NA	NA	intronic	ENSG00000132704	NA	NA	NA	NA	NA	1q23.1	NA	NA	NA	NA	rs57139984	NA	NA	NA	0.558906	0.4821	0.4772	0.4524	0.7905	0.4847	NA	NA	NA	NA	0.4838	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.603275	NA	NA	NA	NA	NA	NA	NA	3.0341
1349	16	65015908	65015908	C	G	intronic	CDH11	NA	NA	NA	intronic	ENSG00000140937	NA	NA	NA	NA	NA	16q21	NA	NA	NA	NA	rs35214	0.23	0.23	0.199	0.19389	0.33	0.2044	0.2061	0.0719	0.1994	0.32	0.23	0.25	0.07	0.28	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.288231	NA	NA	0.356163	0.110531	NA	0.174	NA	3.033837
1349	1	200569392	200569392	C	A	intronic	KIF14	NA	NA	NA	intronic	ENSG00000118193	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs2809357	0.92	0.92	0.909	0.91234	0.9662	0.871	0.8963	0.913	0.91	0.97	0.85	0.9	0.91	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.509587	NA	NA	NA	NA	NA	0.928	NA	3.0338
1349	12	121431300	121431300	C	T	intronic	HNF1A	NA	NA	NA	intronic	ENSG00000135100	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs1169301	0.33	0.33	0.304	0.31869	0.3161	0.4732	0.3501	0.118	0.411	0.31	0.52	0.36	0.13	0.3384	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.193041	NA	NA	0.311744	0.127326	NA	0.246	NA	3.033756
1349	20	3846843	3846843	C	T	UTR3	MAVS	NM_001206491:c.*49C>T,NM_020746:c.*49C>T	NA	NA	UTR3	ENSG00000088888	ENST00000416600:c.*49C>T,ENST00000428216:c.*49C>T	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs3746660	0.32	0.32	0.278	0.298323	0.4433	0.2321	0.415	0.1248	0.3691	0.46	0.23	0.4	0.15	0.4249	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.01632	NA	NA	0.43189	0.178076	NA	0.254	NA	3.0332434
1349	18	14475665	14475665	A	C	intergenic	CYP4F35P,CXADRP3	dist=133142;dist=2289	NA	NA	intergenic	ENSG00000266605,ENSG00000265766	dist=24783;dist=2289	NA	NA	NA	NA	18p11.21	NA	NA	NA	NA	rs9957619	0.4	0.4	0.401	0.445687	0.3002	0.5417	0.3746	0.5492	0.407	0.27	0.51	0.36	0.51	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.512258	NA	NA	NA	NA	NA	0.442	NA	3.0331334
1349	8	120818483	120818483	G	A	intronic	TAF2	NA	NA	NA	intronic	ENSG00000064313	NA	NA	NA	NA	NA	8q24.12	NA	NA	NA	NA	rs4871634	0.32	0.32	0.271	0.25	0.3459	0.3889	0.4813	0.0484	0.1166	0.35	0.4	0.46	0.07	0.3013	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.066353	NA	NA	0.320116	0.097594	ID=COSN168407;OCCURENCE=1(large_intestine)	0.261	NA	3.032684
1349	7	98647139	98647139	C	T	intronic	SMURF1	NA	NA	NA	intronic	ENSG00000198742	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs219826	0.31	0.31	0.313	0.34405	0.3131	0.4405	0.232	0.2428	0.4928	0.32	0.4	0.26	0.24	0.3313	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.656409	NA	NA	0.323023	0.255107	ID=COSN168155;OCCURENCE=2(large_intestine)	0.355	NA	3.032577
1349	1	201115822	201115822	A	G	intronic	TMEM9	NA	NA	NA	intronic	ENSG00000116857	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs3752978	0.37	0.37	0.369	0.357228	0.3201	0.3948	0.2853	0.4244	0.317	0.31	0.4	0.32	0.44	0.3247	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.067538	NA	NA	0.323256	0.413073	NA	0.362	NA	3.031944
1349	5	148627503	148627503	C	T	intronic	ABLIM3	NA	NA	NA	ncRNA_intronic	ENSG00000248647,ENSG00000253406	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs2304609	0.36	0.36	0.336	0.352436	0.4036	0.5734	0.3516	0.1067	0.4049	0.4	0.53	0.33	0.14	0.4279	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.100932	NA	NA	0.470116	0.170903	NA	0.341	NA	3.0317173
1349	19	6732615	6732615	T	C	intronic	GPR108	NA	NA	NA	intronic	ENSG00000125734	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs2047139	0.51	0.51	0.477	0.483826	0.4682	0.7639	0.5346	0.2678	0.4673	0.45	0.75	0.53	0.29	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.648843	NA	NA	0.500314	0.308526	NA	0.42	NA	3.031486
1349	19	49692373	49692373	C	G	intronic	TRPM4	NA	NA	NA	intronic	ENSG00000130529	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs1175791	0.32	0.32	0.295	0.34365	0.325	0.247	0.2507	0.4539	0.3793	0.31	0.22	0.31	0.44	0.3222	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.392966	NA	NA	0.321977	0.433954	NA	0.333	NA	3.030823
1349	5	68417755	68417755	A	G	intronic	SLC30A5	NA	NA	NA	ncRNA_intronic	ENSG00000248664	NA	NA	NA	NA	NA	5q13.2	NA	NA	NA	NA	rs164577	0.43	0.43	0.404	0.42472	0.4254	0.5397	0.4236	0.3268	0.4387	0.42	0.56	0.42	0.33	0.4452	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.661419	NA	NA	0.432209	0.334544	NA	0.478	NA	3.0305243
1349	6	29785996	29785996	C	A	intergenic	LOC554223,HLA-G	dist=20412;dist=8760	NA	NA	intergenic	ENSG00000237042,ENSG00000204632	dist=5523;dist=8748	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs1633067	0.29	0.29	0.289	0.302915	0.3032	0.12	0.3458	0.3752	0.363	0.3	0.16	0.32	0.4	NA	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.258062	NA	NA	NA	NA	NA	0.312	NA	3.0301334
1349	2	152289767	152289767	G	A	intronic	RIF1	NA	NA	NA	intronic	ENSG00000080345	NA	NA	NA	NA	NA	2q23.3	NA	NA	NA	NA	rs72860233	0.24	0.24	0.209	0.197284	0.3231	0.25	0.2752	0.0318	0.182	0.32	0.28	0.25	0.04	0.296	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.456576	NA	NA	0.35093	0.079891	NA	0.188	NA	3.02997
1349	22	17586583	17586583	C	G	intronic	IL17RA	NA	NA	NA	intronic	ENSG00000177663	NA	NA	NA	NA	NA	22q11.1	NA	NA	NA	NA	rs2241047	0.56	0.56	0.547	0.55611	0.4732	0.7837	0.4942	0.4584	0.5828	0.48	0.79	0.46	0.49	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.047147	NA	NA	0.496857	0.476879	NA	0.355	NA	3.029943
1349	19	51359453	51359453	T	C	intronic	KLK3	NA	NA	NA	intronic	ENSG00000142515	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs2271095	0.32	0.32	0.281	0.283746	0.326	0.4196	0.4078	0.1626	0.1759	0.34	0.41	0.4	0.14	0.3275	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.244599	NA	NA	0.316628	0.192238	NA	0.297	NA	3.029872
1349	15	45400164	45400164	T	C	intronic	DUOX2	NA	NA	NA	intronic	ENSG00000140279	NA	NA	NA	NA	NA	15q21.1	NA	NA	NA	NA	rs269861	0.84	0.84	0.807	0.802516	0.9702	0.9931	0.9409	0.3177	0.9908	0.98	1	0.94	0.36	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.378894	NA	NA	NA	NA	NA	0.804	NA	3.0298
1349	9	90387296	90387296	T	G	upstream	CTSL3P	NA	NA	NA	upstream	ENSG00000188029	NA	NA	NA	NA	NA	9q21.33	NA	NA	NA	NA	rs7037401	0.76	0.76	0.762	0.741613	0.6372	0.8313	0.7738	0.795	0.6616	0.66	0.83	0.76	0.83	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.207568	NA	NA	NA	NA	NA	0.812	NA	3.0294666
1349	17	38122708	38122708	T	C	intronic	GSDMA	NA	NA	NA	intronic	ENSG00000167914	NA	NA	NA	NA	NA	17q21.1	NA	NA	NA	NA	rs9914973	0.32	0.32	0.337	0.289537	0.3241	0.3829	0.2594	0.2421	0.2434	0.33	0.4	0.27	0.26	0.3197	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.676	NA	NA	0.327029	0.239293	NA	0.362	NA	3.029171
1349	2	152348842	152348842	T	A	intronic	NEB	NA	NA	NA	intronic	ENSG00000080345,ENSG00000183091	NA	NA	NA	NA	NA	2q23.3	NA	NA	NA	NA	rs2288193	0.24	0.24	0.201	0.201677	0.3231	0.252	0.2752	0.0461	0.183	0.32	0.28	0.25	0.04	0.2993	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.354974	NA	NA	0.348533	0.08543	NA	0.196	NA	3.029067
1349	9	134342938	134342938	T	C	intronic	PRRC2B	NA	NA	NA	intronic	ENSG00000130723	NA	NA	NA	NA	NA	9q34.13	NA	NA	NA	NA	rs10793870	0.17	0.17	0.166	0.14397	0.2863	0.1101	0.1484	0.0356	0.1759	0.29	0.1	0.19	0.05	0.3571	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.186189	NA	NA	0.327752	0.079177	NA	0.181	NA	3.028848
1349	19	54962467	54962467	G	A	UTR5	LENG8	NM_052925:c.-55G>A	NA	NA	UTR5	ENSG00000167615	ENST00000326764:c.-55G>A,ENST00000439657:c.-55G>A,ENST00000376514:c.-55G>A,ENST00000376526:c.-55G>A,ENST00000443957:c.-55G>A,ENST00000431846:c.-55G>A	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs1035451	0.62	0.62	0.644	0.651358	0.662	0.3512	0.5403	0.8926	0.7025	0.64	0.34	0.62	0.9	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.650022	2.650022	NA	0.642678	0.860549	NA	0.522	NA	3.0286554
1349	2	27015969	27015969	G	A	intronic	CENPA	NA	NA	NA	intronic	ENSG00000115163	NA	NA	NA	NA	NA	2p23.3	NA	NA	NA	NA	rs2289018	0.26	0.26	0.257	0.240815	0.334	0.2937	0.2378	0.115	0.2628	0.33	0.28	0.28	0.12	0.2936	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.545505	NA	NA	0.344186	0.157739	NA	0.268	NA	3.028214
1349	19	603513	603513	C	T	intronic	HCN2	NA	NA	NA	intronic	ENSG00000099822	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs4919815	0.33	0.33	0.328	0.29353	0.338	0.3661	0.2723	0.295	0.1861	0.32	0.38	0.26	0.32	0.3105	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.345695	NA	NA	0.323584	0.281279	NA	0.225	NA	3.027916
1349	19	50492860	50492860	C	G	intronic	VRK3	NA	NA	NA	intronic	ENSG00000105053	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs10424282	0.49	0.49	0.512	0.509385	0.2773	0.746	0.4452	0.5696	0.4683	0.26	0.76	0.43	0.59	0.3907	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.015245	NA	NA	0.304302	0.519065	NA	0.435	NA	3.027698
1349	9	14775853	14775853	A	G	exonic	FREM1	NA	synonymous SNV	FREM1:NM_001177704:exon2:c.T399C:p.D133D,FREM1:NM_144966:exon26:c.T4791C:p.D1597D	exonic	ENSG00000164946	NA	synonymous SNV	ENSG00000164946:ENST00000380894:exon2:c.T399C:p.D133D,ENSG00000164946:ENST00000380880:exon25:c.T4791C:p.D1597D,ENSG00000164946:ENST00000380881:exon26:c.T4794C:p.D1598D,ENSG00000164946:ENST00000422223:exon26:c.T4791C:p.D1597D	NA	NA	9p22.3	NA	NA	NA	NA	rs1032474	0.86	0.86	0.838	0.847244	0.8847	0.8502	0.8732	0.7897	0.865	0.89	0.84	0.86	0.83	0.8678	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.943155	NA	NA	0.886627	0.818863	NA	0.877	NA	3.0275396
1349	2	74448655	74448655	T	C	intronic	SLC4A5	NA	NA	NA	intronic	ENSG00000188687,ENSG00000264324	NA	NA	NA	NA	NA	2p13.1	NA	NA	NA	NA	rs7587117	0.23	0.23	0.202	0.186502	0.3698	0.131	0.1844	0.1135	0.1554	0.37	0.15	0.21	0.13	0.2741	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.087343	NA	NA	0.328721	0.151838	NA	0.312	NA	3.027379
1349	1	228444318	228444318	T	G	intronic	OBSCN	NA	NA	NA	intronic	ENSG00000154358	NA	NA	NA	NA	NA	1q42.13	Score=903;Name=V$RORA1_01	NA	NA	NA	rs7532144	0.63	0.63	0.586	0.617013	0.6402	0.5992	0.6513	0.7133	0.4571	0.63	0.59	0.64	0.65	0.6507	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.026675	NA	NA	0.682109	0.733412	ID=COSN163463;OCCURENCE=1(breast)	0.616	NA	3.026991
1349	15	45457127	45457127	C	T	UTR3	DUOX1	NM_017434:c.*28C>T,NM_175940:c.*28C>T	NA	NA	ncRNA_UTR3	ENSG00000137857	NA	NA	NA	NA	NA	15q21.1	NA	NA	NA	NA	rs7169193	0.69	0.69	0.693	0.712859	0.4662	0.9246	0.6758	0.8147	0.637	0.45	0.97	0.63	0.77	0.5684	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.002582	NA	NA	0.43846	0.74454	NA	0.63	NA	3.02694
1349	14	24520218	24520218	T	C	UTR3	DHRS4L1	NM_001277864:c.*41T>C	NA	NA	ncRNA_exonic	ENSG00000225766	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs7152726	0.31	0.31	0.24	0.279752	0.5318	0.0397	0.5519	0.0847	0.3384	0.52	0.05	0.55	0.11	0.4403	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.968862	NA	NA	0.501163	0.157811	NA	0.275	NA	3.026737
1349	17	910401	910401	G	A	intronic	ABR	NA	NA	NA	intronic	ENSG00000159842	NA	NA	NA	NA	NA	17p13.3	NA	NA	NA	NA	rs2586305	0.37	0.37	0.257	0.337859	0.4742	0.2192	0.4625	0.2716	0.3211	0.46	0.24	0.5	0.29	0.0014	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.042475	2.042475	NA	0.49779	0.307989	NA	NA	NA	3.02661
1349	8	90958530	90958530	T	C	intronic	NBN	NA	NA	NA	intronic	ENSG00000104320	NA	NA	NA	NA	NA	8q21.3	NA	NA	NA	NA	rs2308962	0.35	0.35	0.321	0.378994	0.3062	0.4673	0.3804	0.3124	0.4519	0.31	0.46	0.34	0.29	0.3529	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.194511	NA	NA	0.314375	0.310713	NA	0.37	NA	3.026525
1349	1	205239031	205239031	C	G	intronic	TMCC2	NA	NA	NA	intronic	ENSG00000133069	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs1668870	0.18	0.18	0.147	0.126398	0.3539	0.0377	0.183	0.031	0.0726	0.36	0.03	0.23	0.03	0.2712	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.028916	NA	NA	0.34852	0.074932	NA	0.326	NA	3.02638
1349	9	73457861	73457861	A	G	intronic	TRPM3	NA	NA	NA	UTR3	ENSG00000083067	ENST00000377097:c.*28T>C	NA	NA	NA	NA	9q21.12	NA	NA	NA	NA	rs1337030	0.49	0.49	0.456	0.520567	0.5835	0.2728	0.5591	0.5885	0.592	0.58	0.24	0.59	0.57	0.5568	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.234591	NA	NA	NA	NA	NA	0.565	NA	3.0263667
1349	11	107904646	107904646	C	T	intronic	CUL5	NA	NA	NA	intronic	ENSG00000166266	NA	NA	NA	NA	NA	11q22.3	Score=726;Name=V$PAX4_04	NA	NA	NA	rs10890800	0.67	0.67	0.644	0.658746	0.6511	0.9018	0.7378	0.3691	0.7515	0.65	0.91	0.7	0.4	0.667	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.855432	NA	NA	0.65569	0.396136	NA	0.601	NA	3.02621
1349	19	15882796	15882796	T	A	ncRNA_intronic	CYP4F24P	NA	NA	NA	ncRNA_intronic	ENSG00000267594	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs2285889	0.86	0.86	0.83	0.859425	0.8141	0.9425	0.8573	0.8434	0.8436	0.82	0.94	0.86	0.85	0.8264	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.31359	NA	NA	NA	NA	NA	0.783	NA	3.0261666
1349	12	41330531	41330531	T	C	intronic	CNTN1	NA	NA	NA	intronic	ENSG00000018236	NA	NA	NA	NA	NA	12q12	NA	NA	NA	NA	rs2289522	0.49	0.49	0.489	0.491813	0.508	0.3383	0.5403	0.6203	0.4254	0.5	0.35	0.54	0.61	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.242716	NA	NA	0.465846	0.611301	NA	0.58	NA	3.026154
1349	20	31814348	31814348	G	A	intronic	BPIFA3	NA	NA	NA	intronic	ENSG00000131059	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs1570033	0.56	0.56	NA	0.567492	0.4831	0.4246	0.5403	0.9115	0.3558	0.47	0.41	0.53	0.89	0.4913	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.386227	NA	NA	NA	NA	NA	0.536	NA	3.0256
1349	5	180056044	180056044	G	A	intronic	FLT4	NA	NA	NA	intronic	ENSG00000037280	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs13359473	0.21	0.21	0.206	0.21246	0.341	0.0536	0.2291	0.1384	0.3323	0.34	0.07	0.29	0.12	0.2996	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.381801	NA	NA	0.334071	0.16099	NA	0.268	NA	3.025329
1349	8	90955624	90955624	T	A	intronic	NBN	NA	NA	NA	intronic	ENSG00000104320	NA	NA	NA	NA	NA	8q21.3	NA	NA	NA	NA	rs3736639	0.35	0.35	0.313	0.379193	0.3062	0.4663	0.3804	0.3132	0.453	0.31	0.45	0.34	0.29	0.3535	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.736074	NA	NA	0.315116	0.311621	NA	0.362	NA	3.025184
1350	20	61524133	61524133	C	T	intronic	DIDO1	NA	NA	NA	intronic	ENSG00000101191	NA	NA	NA	NA	NA	20q13.33	NA	NA	NA	NA	rs2294998	0.36	0.36	0.37	0.369609	0.2982	0.3115	0.2723	0.5772	0.2914	0.3	0.33	0.3	0.55	0.3387	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.655706	NA	NA	0.33814	0.575352	NA	0.42	NA	3.02496
1350	15	90177157	90177157	C	T	intronic	KIF7	NA	NA	NA	intronic	ENSG00000166813	NA	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs894156	0.27	0.27	0.262	0.275359	0.331	0.3948	0.2867	0.084	0.3456	0.34	0.35	0.25	0.08	0.3109	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.061835	NA	NA	0.333217	0.109773	NA	0.261	NA	3.024883
1350	7	2290433	2290433	C	T	intronic	NUDT1	NA	NA	NA	intronic	ENSG00000106268	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs10230928	0.29	0.29	0.305	0.301518	0.329	0.2044	0.2248	0.4191	0.2689	0.35	0.2	0.22	0.35	0.3146	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.937892	NA	NA	0.331628	0.38493	NA	0.217	NA	3.024772
1350	1	233398670	233398670	C	A	intronic	PCNXL2	NA	NA	NA	intronic	ENSG00000135749	NA	NA	NA	NA	NA	1q42.2	NA	NA	NA	NA	rs12132556	0.25	0.25	0.234	0.277157	0.3429	0.1647	0.2291	0.2057	0.456	0.34	0.16	0.23	0.21	0.3203	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.314369	NA	NA	0.312377	0.2148	NA	0.188	NA	3.024423
1350	1	20944909	20944909	G	A	intronic	CDA	NA	NA	NA	intronic	ENSG00000158825	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs61781969	0.32	0.32	0.308	0.311502	0.3231	0.244	0.317	0.3805	0.272	0.33	0.25	0.31	0.37	0.3378	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.847893	NA	NA	0.31503	0.396732	ID=COSN162993;OCCURENCE=1(NS)	0.319	NA	3.02407
1350	12	4708150	4708150	T	A	intronic	DYRK4	NA	NA	NA	intronic	ENSG00000010219	NA	NA	NA	NA	NA	12p13.32	NA	NA	NA	NA	rs3741926	0.32	0.32	0.293	0.305312	0.337	0.3155	0.3184	0.3139	0.2413	0.35	0.31	0.31	0.32	0.32	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.050382	NA	NA	0.31907	0.315933	NA	0.413	NA	3.02393
1350	16	56667165	56667165	A	G	intronic	MT1M	NA	NA	NA	intronic	ENSG00000205364	NA	NA	NA	NA	NA	16q12.2	NA	NA	NA	NA	rs1827209	0.87	0.87	0.843	0.871406	0.9761	0.8948	0.9452	0.6543	0.9806	0.97	0.9	0.94	0.64	NA	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.521733	NA	NA	NA	NA	NA	0.87	NA	3.0239
1350	12	51319346	51319346	A	G	intronic	METTL7A	NA	NA	NA	intronic	ENSG00000185432	NA	NA	NA	NA	NA	12q13.12	NA	NA	Name=10	NA	rs2359005	0.66	0.66	0.642	0.677915	0.6481	0.6696	0.5879	0.7368	0.7014	0.62	0.66	0.61	0.74	0.6653	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.623003	NA	NA	0.663253	0.726818	NA	0.58	NA	3.023347
1350	9	127495508	127495508	C	T	intronic	NR6A1	NA	NA	NA	intronic	ENSG00000148200	NA	NA	NA	NA	NA	9q33.3	NA	NA	NA	NA	rs10760374	0.49	0.49	0.474	0.495407	0.4682	0.3899	0.6614	0.4818	0.5327	0.48	0.42	0.62	0.5	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.374593	2.374593	NA	0.508491	0.46604	NA	0.486	NA	3.023309
1350	1	155294772	155294772	A	G	intronic	RUSC1	NA	NA	NA	intronic	ENSG00000160753	NA	NA	NA	NA	NA	1q22	NA	Name=ZBTB7A_(SC-34508),GATA-1,ETS1	Name=84	NA	rs4971075	0.93	0.93	0.915	0.915335	1	0.999	0.9784	0.7057	0.9806	1	1	0.97	0.73	0.9774	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.928893	NA	NA	0.999302	0.797776	NA	0.942	NA	3.023298
1350	5	148610276	148610276	C	A	intronic	ABLIM3	NA	NA	NA	ncRNA_intronic	ENSG00000248647,ENSG00000253406	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs2918265	0.44	0.44	0.418	0.442891	0.4046	0.5942	0.3977	0.385	0.4366	0.39	0.55	0.38	0.41	0.4387	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.699775	NA	NA	0.46686	0.40286	NA	0.457	NA	3.0231733
1350	6	44107200	44107200	G	A	intronic	TMEM63B	NA	NA	NA	intronic	ENSG00000137216	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs11967633	0.24	0.24	0.209	0.219848	0.327	0.0437	0.3112	0.2625	0.1687	0.33	0.05	0.33	0.27	0.2945	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.091066	NA	NA	0.355349	0.270767	NA	0.355	NA	3.023151
1350	17	10317831	10317831	A	G	intronic	MYH8	NA	NA	NA	ncRNA_intronic	ENSG00000214970	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs4791406	0.5	0.5	0.464	0.525759	0.3698	0.876	0.5159	0.2761	0.6697	0.37	0.88	0.51	0.26	0.5289	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.224441	NA	NA	0.411765	0.298073	NA	0.558	NA	3.0228683
1350	1	193094375	193094375	T	C	intronic	CDC73	NA	NA	NA	intronic	ENSG00000134371	NA	NA	NA	NA	NA	1q31.2	NA	NA	NA	NA	rs4466634	0.56	0.56	NA	0.590256	0.6332	0.4494	0.6268	0.5106	0.773	0.63	0.45	0.63	0.53	0.6567	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.006973	NA	NA	0.687326	0.529505	NA	0.486	CLINSIG=non-pathogenic;CLNDBN=Parathyroid_carcinoma;CLNREVSTAT=single;CLNACC=RCV000020881.2;CLNDSDB=GeneReviews:MedGen:OMIM:Orphanet:SNOMED_CT;CLNDSDBID=NBK3789:C0687150:608266:ORPHA143:255037004	3.022774
1350	16	2903845	2903845	G	T	intronic	PRSS22	NA	NA	NA	intronic	ENSG00000005001	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs2074294	0.39	0.39	0.377	0.411941	0.2972	0.503	0.2738	0.4614	0.4673	0.32	0.49	0.27	0.48	0.3504	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.082759	NA	NA	0.329728	0.418562	NA	0.319	NA	3.022672
1350	11	113209428	113209428	C	G	intronic	TTC12	NA	NA	NA	intronic	ENSG00000149292	NA	NA	NA	NA	NA	11q23.2	NA	NA	NA	NA	rs10891536	0.26	0.26	0.236	0.225639	0.4831	0.0536	0.2954	0.0734	0.2945	0.48	0.05	0.36	0.08	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.0219	NA	NA	0.494657	0.158237	NA	0.174	NA	3.022243
1350	7	73107003	73107003	C	A	intronic	WBSCR22	NA	NA	NA	intronic	ENSG00000071462	NA	NA	NA	NA	NA	7q11.23	NA	NA	NA	NA	rs2293490	0.23	0.23	0.211	0.232228	0.336	0.1756	0.3473	0.0325	0.3722	0.33	0.18	0.36	0.02	0.3022	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.236387	NA	NA	0.339651	0.081934	NA	0.196	NA	3.022149
1350	19	46204938	46204938	C	T	intronic	QPCTL	NA	NA	NA	intronic	ENSG00000011478	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs4803847	0.99	0.99	0.991	0.993011	0.9781	1	0.987	0.9992	0.9969	0.98	1	0.98	1	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.254944	NA	NA	NA	NA	NA	0.986	NA	3.0219
1350	10	29818604	29818604	A	C	intronic	SVIL	NA	NA	NA	intronic	ENSG00000197321	NA	NA	NA	NA	NA	10p11.23	NA	NA	NA	NA	rs913035	0.27	0.27	0.277	0.272165	0.3419	0.0823	0.3184	0.3502	0.2577	0.34	0.1	0.33	0.33	0.3037	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.211849	NA	NA	0.332907	0.363595	NA	0.355	NA	3.021493
1350	9	139642961	139642961	G	A	ncRNA_exonic	LOC100128593	NA	NA	NA	UTR5	ENSG00000267206	ENST00000341206:c.-26C>T	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs2811728	0.48	0.48	0.473	0.445487	0.495	0.7103	0.4135	0.2201	0.4489	0.48	0.73	0.44	0.24	0.5133	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.326335	NA	NA	0.470547	0.271546	NA	0.341	NA	3.021153
1350	9	422157	422157	T	C	intronic	DOCK8	NA	NA	NA	intronic	ENSG00000107099	NA	NA	NA	NA	NA	9p24.3	NA	NA	Name=13	NA	rs10217719	0.67	0.67	0.647	0.624401	0.661	0.9504	0.647	0.3207	0.6452	0.67	0.96	0.67	0.33	0.6562	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.248431	2.248431	NA	0.661744	0.37744	NA	0.565	NA	3.021056
1350	4	151161490	151161490	T	C	intronic	DCLK2	NA	NA	NA	intronic	ENSG00000170390	NA	NA	NA	NA	NA	4q31.3	NA	NA	Name=27	NA	rs6838238	0.95	0.95	0.95	0.945088	0.9891	0.9613	0.9841	0.8593	0.9714	0.99	0.95	0.99	0.88	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.166588	NA	NA	0.989943	0.863439	NA	0.949	NA	3.020957
1350	7	73108310	73108310	T	C	intronic	WBSCR22	NA	NA	NA	intronic	ENSG00000071462	NA	NA	NA	NA	NA	7q11.23	NA	NA	NA	NA	rs2293487	0.23	0.23	0.193	0.232428	0.337	0.1756	0.3473	0.0325	0.3722	0.33	0.18	0.36	0.02	0.3024	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.595487	2.595487	NA	0.339651	0.081934	NA	0.196	NA	3.020949
1350	14	88729931	88729931	G	T	intronic	KCNK10	NA	NA	NA	intronic	ENSG00000100433	NA	NA	NA	Score=284;Name=lod=19	NA	14q31.3	NA	NA	NA	NA	rs761971	0.67	0.67	0.655	0.659744	0.6571	0.6855	0.7853	0.6165	0.6053	0.65	0.71	0.75	0.6	0.6745	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.374054	1.374054	NA	0.647494	0.622624	NA	0.58	NA	3.020906
1350	15	31192606	31192606	C	G	intergenic	HERC2P10,FAN1	dist=72620;dist=3449	NA	NA	downstream	ENSG00000261628	NA	NA	NA	NA	NA	15q13.2	NA	NA	NA	NA	rs28721380	0.54	0.54	0.515	0.501398	0.4791	0.8264	0.5072	0.2315	0.5501	0.5	0.86	0.5	0.24	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2161	NA	NA	NA	NA	NA	0.587	NA	3.0209
1350	3	46713102	46713102	C	T	intronic	ALS2CL	NA	NA	NA	intronic	ENSG00000178038	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs6776565	0.3	0.3	0.27	0.308107	0.327	0.3571	0.3314	0.1566	0.4264	0.33	0.35	0.31	0.18	0.3333	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.123676	NA	NA	0.319186	0.205629	NA	0.268	NA	3.020514
1350	1	230386341	230386341	T	A	intronic	GALNT2	NA	NA	NA	intronic	ENSG00000143641	NA	NA	NA	NA	NA	1q42.13	NA	NA	NA	NA	rs2273966	0.31	0.31	0.303	0.283347	0.327	0.129	0.2651	0.382	0.2771	0.33	0.17	0.34	0.42	0.3119	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.264459	NA	NA	0.340698	0.354063	NA	0.341	NA	3.020402
1350	8	23302164	23302164	A	G	intronic	ENTPD4	NA	NA	NA	intronic	ENSG00000197217	NA	NA	NA	NA	NA	8p21.2	NA	NA	NA	NA	rs2272640	0.42	0.42	0.433	0.448682	0.3141	0.4365	0.2896	0.674	0.408	0.32	0.44	0.3	0.65	0.3523	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.322309	NA	NA	0.313256	0.616205	NA	0.529	NA	3.020344
1350	2	49510173	49510173	A	C	intergenic	FSHR,NRXN1	dist=128507;dist=635470	NA	NA	intergenic	ENSG00000206915,ENSG00000234253	dist=49135;dist=595588	NA	NA	Score=395;Name=lod=54	NA	2p16.3	NA	NA	NA	NA	rs7578654	0.45	0.45	0.467	0.451078	0.4543	0.4107	0.4251	0.5098	0.4284	0.46	0.42	0.41	0.52	0.4275	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.688838	NA	NA	0.43119	0.474886	NA	0.522	NA	3.0203434
1350	12	51585599	51585599	T	G	intronic	POU6F1	NA	NA	NA	intronic	ENSG00000184271	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs10735831	0.39	0.39	0.38	0.398163	0.3181	0.2609	0.3732	0.6188	0.3415	0.32	0.28	0.41	0.63	0.3441	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.435709	NA	NA	0.31767	0.573097	NA	0.072	NA	3.02013
1350	1	171548617	171548617	G	A	intronic	PRRC2C	NA	NA	NA	intronic	ENSG00000117523	NA	NA	NA	NA	NA	1q24.3	NA	NA	NA	NA	rs3817772	0.37	0.37	0.362	0.291134	0.3131	0.5933	0.3228	0.1422	0.136	0.31	0.61	0.35	0.19	0.319	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.553683	2.553683	NA	0.348256	0.186337	NA	0.326	NA	3.019644
1350	19	39991237	39991237	C	G	intronic	DLL3	NA	NA	NA	intronic	ENSG00000090932	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs2304223	0.23	0.23	0.197	0.24381	0.3429	0.1468	0.2608	0.1399	0.3701	0.34	0.11	0.28	0.15	0.3045	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.815038	2.815038	NA	0.333023	0.184748	NA	0.188	NA	3.019577
1350	19	18311111	18311111	A	G	intronic	RAB3A	NA	NA	NA	intronic	ENSG00000105649	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs3803919	0.25	0.25	NA	0.215056	0.3668	0.0913	0.3213	0.1876	0.1483	0.39	0.1	0.31	0.15	0.2951	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.452778	NA	NA	0.31907	0.160836	NA	0.145	NA	3.01903
1350	3	184766249	184766249	T	C	intronic	VPS8	NA	NA	NA	intronic	ENSG00000156931	NA	NA	NA	NA	NA	3q27.2	NA	NA	NA	NA	rs6779564	0.41	0.41	NA	0.551318	0.4404	0.6657	0.4914	0.5454	0.5982	0.34	0.54	0.43	0.35	0.4757	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.184641	NA	NA	0.064922	0.090437	NA	NA	NA	3.018978
1350	2	152043161	152043161	C	T	intergenic	RND3,RBM43	dist=698952;dist=61567	NA	NA	upstream;downstream	ENSG00000236885;ENSG00000213201	NA	NA	NA	NA	NA	2q23.3	NA	NA	NA	NA	rs34276187	0.37	0.37	0.33	0.330871	0.4811	0.4067	0.5144	0.0726	0.317	0.49	0.39	0.52	0.07	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.823596	NA	NA	NA	NA	NA	0.362	NA	3.0189
1350	7	152446055	152446055	C	T	intergenic	XRCC2,ACTR3B	dist=72805;dist=10779	NA	NA	upstream	ENSG00000214003	NA	NA	NA	NA	NA	7q36.1	NA	NA	NA	NA	rs7793141	0.34	0.34	0.341	0.319888	0.4811	0.1022	0.255	0.4266	0.2802	0.46	0.12	0.29	0.42	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.890795	NA	NA	NA	NA	NA	0.326	NA	3.0189
1350	12	51585335	51585335	G	A	intronic	POU6F1	NA	NA	NA	intronic	ENSG00000184271	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs10783419	0.35	0.35	0.337	0.350439	0.3181	0.2569	0.3602	0.4478	0.3415	0.32	0.27	0.39	0.47	0.3313	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.057859	NA	NA	0.331744	0.423513	NA	0.304	NA	3.018856
1350	11	9746201	9746201	G	A	intronic	SWAP70	NA	NA	NA	intronic	ENSG00000133789	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs1695613	0.27	0.27	0.268	0.258986	0.3221	0.1726	0.183	0.3313	0.2393	0.33	0.19	0.22	0.31	0.3116	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.346446	1.346446	NA	0.347543	0.332803	NA	0.377	NA	3.018757
1350	17	10317842	10317842	A	G	intronic	MYH8	NA	NA	NA	ncRNA_intronic	ENSG00000214970	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs4791407	0.5	0.5	0.479	0.525759	0.3698	0.876	0.5159	0.2761	0.6697	0.37	0.88	0.51	0.26	0.5307	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.710542	NA	NA	0.414232	0.300322	NA	0.558	NA	3.0186013
1350	17	75800690	75800690	G	A	intergenic	LOC100507351,FLJ45079	dist=239587;dist=74393	NA	NA	intergenic	ENSG00000267790,ENSG00000204283	dist=76049;dist=74419	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs72900461	0.22	0.22	0.203	0.207867	0.3151	0.1647	0.2925	0.1422	0.1708	0.3	0.15	0.28	0.14	NA	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.127657	NA	NA	NA	NA	NA	0.326	NA	3.0182334
1350	19	9060605	9060605	G	A	exonic	MUC16	NA	synonymous SNV	MUC16:NM_024690:exon3:c.C26841T:p.S8947S	exonic	ENSG00000181143	NA	synonymous SNV	ENSG00000181143:ENST00000397910:exon3:c.C26841T:p.S8947S	NA	NA	19p13.2	NA	NA	NA	NA	rs2194168	0.86	0.86	0.861	0.856829	0.8767	0.8522	0.9006	0.8253	0.8528	0.88	0.88	0.89	0.79	0.8725	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.422128	NA	NA	0.899284	0.849704	NA	0.899	NA	3.0181826
1350	12	125437142	125437142	C	T	intronic	DHX37	NA	NA	NA	intronic	ENSG00000150990	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs6488959	0.23	0.23	0.191	0.271366	0.3499	0.2262	0.3357	0.0567	0.4816	0.33	0.21	0.3	0.04	0.3162	0.33	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.98111	NA	NA	0.315814	0.097367	NA	0.181	NA	3.018086
1350	8	59511756	59511756	C	T	intronic	NSMAF	NA	NA	NA	intronic	ENSG00000035681	NA	NA	NA	NA	NA	8q12.1	NA	NA	NA	NA	rs10111180	0.34	0.34	0.334	0.334065	0.3559	0.5476	0.2248	0.1755	0.3834	0.33	0.51	0.27	0.21	0.3147	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.622733	NA	NA	0.311395	0.194507	NA	0.275	NA	3.018005
1350	7	27064596	27064596	T	C	intergenic	SKAP2,HOXA1	dist=160255;dist=68018	NA	NA	downstream	ENSG00000214869	NA	NA	NA	NA	NA	7p15.2	NA	NA	NA	NA	rs2428430	0.53	0.53	0.527	0.550519	0.4821	0.4444	0.4251	0.857	0.4049	0.47	0.42	0.41	0.81	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.945308	NA	NA	NA	NA	NA	0.616	NA	3.0179
1350	11	122490000	122490000	T	C	intergenic	MIR100HG,UBASH3B	dist=416230;dist=36398	NA	NA	downstream	ENSG00000254935	NA	NA	NA	NA	NA	11q24.1	NA	NA	NA	NA	rs4489754	0.51	0.51	0.486	0.509984	0.4821	0.629	0.4856	0.4818	0.4714	0.46	0.64	0.46	0.49	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.210286	NA	NA	NA	NA	NA	0.449	NA	3.0179
1350	22	22842206	22842206	T	C	exonic	ZNF280B	NA	synonymous SNV	ZNF280B:NM_080764:exon4:c.A1518G:p.S506S	exonic	ENSG00000198477	NA	synonymous SNV	ENSG00000198477:ENST00000360412:exon4:c.A1518G:p.S506S,ENSG00000198477:ENST00000406426:exon4:c.A1518G:p.S506S	NA	NA	22q11.22	NA	NA	NA	NA	rs11109	0.85	0.85	0.843	0.79972	0.9076	0.7698	0.8991	0.7708	0.6881	0.91	0.78	0.89	0.81	0.8443	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.708128	NA	NA	0.896977	0.781434	NA	0.79	NA	3.0177896
1350	16	58589112	58589112	G	A	intronic	CNOT1	NA	NA	NA	intronic	ENSG00000125107	NA	NA	NA	NA	NA	16q21	NA	NA	NA	NA	rs1568399	0.46	0.46	0.464	0.485224	0.3211	0.5704	0.2983	0.6687	0.4509	0.32	0.59	0.3	0.66	0.3705	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.035764	NA	NA	0.290698	0.602366	NA	0.399	NA	3.017702
1350	19	9060812	9060812	T	C	exonic	MUC16	NA	synonymous SNV	MUC16:NM_024690:exon3:c.A26634G:p.S8878S	exonic	ENSG00000181143	NA	synonymous SNV	ENSG00000181143:ENST00000397910:exon3:c.A26634G:p.S8878S	NA	NA	19p13.2	NA	NA	NA	NA	rs1820099	0.86	0.86	0.86	0.857428	0.8767	0.8522	0.9006	0.8253	0.8558	0.88	0.88	0.89	0.79	0.8728	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.140284	NA	NA	0.899543	0.845651	NA	0.899	NA	3.0176236
1350	9	139973629	139973629	A	C	intronic	UAP1L1	NA	NA	NA	intronic	ENSG00000197355	NA	NA	NA	NA	NA	9q34.3	NA	NA	Name=4	NA	rs7390710	0.5	0.5	0.43	0.501398	0.671	0.4742	0.5879	0.2088	0.6892	0.67	0.44	0.58	0.25	0.6242	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.084675	NA	NA	0.687719	0.292332	NA	0.406	NA	3.017081
1350	18	61326505	61326505	T	A	intronic	SERPINB3	NA	NA	NA	intronic	ENSG00000057149	NA	NA	NA	NA	NA	18q21.33	NA	NA	Name=31	NA	rs8089032	0.97	0.97	0.966	0.966054	0.995	0.9861	0.9928	0.9123	0.9693	1	0.98	0.99	0.92	0.9882	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.143326	NA	NA	NA	NA	NA	0.949	NA	3.0168
1350	3	113522544	113522544	T	C	intronic	ATP6V1A	NA	NA	NA	intronic	ENSG00000114573	NA	NA	NA	NA	NA	3q13.31	NA	NA	NA	NA	rs13321446	0.37	0.37	0.339	0.302915	0.3787	0.3472	0.2046	0.3752	0.1513	0.41	0.36	0.25	0.41	0.3357	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.886552	NA	NA	0.269276	0.304131	NA	0.261	NA	3.016324
1350	16	81241249	81241249	T	A	intronic	PKD1L2	NA	NA	NA	intronic	ENSG00000166473,ENSG00000269323	NA	NA	NA	NA	NA	16q23.2	NA	NA	NA	NA	rs72831349	0.19	0.19	0.169	0.157348	0.3787	0.003	0.232	0.0855	0.1329	0.36	0.0017	0.29	0.08	0.2642	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.534592	NA	NA	0.340777	0.129156	NA	0.181	NA	3.016323
1350	16	58580213	58580213	T	C	intronic	CNOT1	NA	NA	NA	intronic	ENSG00000125107	NA	NA	NA	NA	NA	16q21	NA	NA	NA	NA	rs2241570	0.46	0.46	0.485	0.485423	0.3211	0.5694	0.2983	0.6694	0.4519	0.32	0.59	0.3	0.66	0.3696	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.173457	NA	NA	0.293023	0.604641	NA	0.399	NA	3.016277
1350	1	26900735	26900735	C	G	UTR3	RPS6KA1	NM_002953:c.*43C>G,NM_001006665:c.*43C>G	NA	NA	UTR3	ENSG00000117676	ENST00000374168:c.*43C>G,ENST00000374166:c.*43C>G,ENST00000526792:c.*43C>G,ENST00000374162:c.*43C>G,ENST00000530003:c.*43C>G,ENST00000374163:c.*1742C>G,ENST00000531382:c.*43C>G	NA	NA	NA	NA	1p36.11	NA	Name=CTCF	NA	NA	rs282179	0.77	0.77	0.792	0.785942	0.7783	0.8492	0.6974	0.7557	0.8323	0.79	0.83	0.71	0.74	0.779	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.252531	NA	NA	0.760116	0.751475	NA	0.717	NA	3.0159174
1350	11	67554693	67554693	G	A	intergenic	ALDH3B2,FAM86C2P	dist=106008;dist=4545	NA	NA	ncRNA_intronic	ENSG00000227620	NA	NA	NA	NA	NA	11q13.2	NA	NA	NA	NA	rs10791940	0.98	0.98	0.98	0.982029	0.9841	0.998	0.987	0.972	0.9734	0.99	1	0.98	0.96	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.512613	NA	NA	NA	NA	NA	0.087	NA	3.0159
1350	12	55250549	55250549	T	G	intronic	MUCL1	NA	NA	NA	intronic	ENSG00000172551	NA	NA	NA	NA	NA	12q13.2	NA	NA	NA	NA	rs10783685	0.46	0.46	0.411	NA	NA	NA	NA	NA	NA	0.44	0.71	0.54	0.16	0.5404	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.080871	NA	NA	0.443721	0.157966	NA	0.391	NA	3.015879
1350	3	27047502	27047502	T	C	intergenic	LRRC3B,NEK10	dist=295237;dist=209595	NA	NA	intergenic	ENSG00000221438,ENSG00000163491	dist=251935;dist=104074	NA	NA	NA	NA	3p24.1	NA	NA	NA	NA	rs1839022	0.2	0.2	0.178	0.207668	0.3181	0.0516	0.2133	0.1392	0.3436	0.32	0.05	0.24	0.15	NA	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.935049	NA	NA	NA	NA	NA	0.196	NA	3.0152334
1351	19	39691216	39691216	A	T	intronic	NCCRP1	NA	NA	NA	intronic	ENSG00000188505	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs11672475	0.35	0.35	0.301	0.320288	0.3201	0.4236	0.3285	0.2239	0.3384	0.31	0.48	0.39	0.25	0.3413	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.69393	NA	NA	0.323837	0.289605	NA	0.355	NA	3.014763
1351	16	1570857	1570857	T	C	intronic	IFT140	NA	NA	NA	intronic	ENSG00000187535	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs932391	0.52	0.52	0.533	0.553514	0.2833	0.6389	0.4885	0.829	0.4172	0.28	0.59	0.46	0.83	0.4141	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.336675	NA	NA	0.287907	0.728585	NA	0.543	NA	3.014693
1351	7	47319852	47319852	C	T	intronic	TNS3	NA	NA	NA	intronic	ENSG00000136205	NA	NA	NA	NA	NA	7p12.3	NA	NA	NA	NA	rs6971754	0.21	0.21	0.204	0.203874	0.3529	0.0506	0.3271	0.1377	0.2106	0.35	0.05	0.29	0.14	0.2828	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.79911	NA	NA	0.350221	0.185014	NA	0.254	NA	3.014079
1351	7	142099988	142099988	A	G	intergenic	LOC730441,MTRNR2L6	dist=127920;dist=274143	NA	NA	upstream	ENSG00000229200	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs361366	0.25	0.25	0.236	0.305312	0.1471	0.1131	0.2205	0.643	0.2699	0.13	0.11	0.25	0.6	0.1947	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.099243	NA	NA	0.144284	0.501394	NA	0.37	NA	3.013916
1351	1	153283179	153283179	A	G	UTR5	PGLYRP3	NM_052891:c.-38T>C	NA	NA	UTR5	ENSG00000159527	ENST00000290722:c.-38T>C	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs3006473	0.35	0.35	0.321	0.325479	0.4672	0.1885	0.3689	0.3389	0.272	0.49	0.19	0.38	0.29	0.3956	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.908236	NA	NA	0.456744	0.362233	NA	0.232	NA	3.0137894
1351	1	233397752	233397752	T	C	intronic	PCNXL2	NA	NA	NA	intronic	ENSG00000135749	NA	NA	NA	NA	NA	1q42.2	NA	NA	NA	NA	rs6701073	0.25	0.25	0.236	0.277356	0.3429	0.1657	0.2291	0.2057	0.456	0.34	0.16	0.23	0.21	0.3208	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.498199	NA	NA	0.322782	0.224311	NA	0.196	NA	3.013518
1351	6	169982927	169982927	T	A	intronic	WDR27	NA	NA	NA	intronic	ENSG00000184465	NA	NA	NA	NA	NA	6q27	NA	NA	NA	NA	rs6941625	0.53	0.53	0.523	0.572484	0.2734	0.8393	0.5965	0.6051	0.544	0.27	0.81	0.54	0.59	0.4361	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.484819	NA	NA	0.27699	0.525355	NA	0.391	NA	3.01351
1351	1	10420937	10420937	C	T	intronic	KIF1B	NA	NA	NA	intronic	ENSG00000054523	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs3748579	0.36	0.36	0.352	0.334065	0.338	0.3462	0.3761	0.3351	0.2863	0.34	0.37	0.41	0.34	0.3218	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.034439	NA	NA	0.326744	0.325011	NA	0.312	NA	3.013456
1351	1	161823011	161823011	T	A	intronic	ATF6	NA	NA	NA	intronic	ENSG00000118217	NA	NA	NA	Score=462;Name=lod=101	NA	1q23.3	NA	NA	NA	NA	rs2257107	0.44	0.44	0.412	0.400958	0.7038	0.3056	0.4395	0.0696	0.6084	0.72	0.34	0.49	0.08	0.6184	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.958098	1.958098	NA	0.664379	0.161144	ID=COSM146670;OCCURENCE=1(stomach)	0.522	NA	3.013421
1351	1	157557957	157557957	T	C	intronic	FCRL4	NA	NA	NA	intronic	ENSG00000163518	NA	NA	NA	NA	NA	1q23.1	NA	NA	NA	NA	rs11799853	0.3	0.3	0.283	0.297324	0.3539	0.2202	0.3127	0.3071	0.2945	0.34	0.2	0.35	0.32	0.3025	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.295141	NA	NA	0.330233	0.315706	NA	0.326	NA	3.013367
1351	7	23823144	23823144	A	G	intronic	STK31	NA	NA	NA	intronic	ENSG00000196335	NA	NA	NA	NA	NA	7p15.3	NA	NA	NA	NA	rs10950961	0.45	0.45	0.44	0.474641	0.507	0.5129	0.366	0.4455	0.5184	0.5	0.47	0.36	0.43	NA	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.331924	NA	NA	0.479887	0.458815	NA	0.312	NA	3.013113
1351	1	10394536	10394536	C	G	intronic	KIF1B	NA	NA	NA	intronic	ENSG00000054523	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs2276100	0.36	0.36	0.338	0.333866	0.338	0.3462	0.3732	0.3351	0.2873	0.34	0.37	0.4	0.34	0.322	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.45947	1.45947	NA	0.327093	0.324784	NA	0.312	NA	3.012907
1351	4	178272748	178272748	G	A	intronic	NEIL3	NA	NA	NA	ncRNA_intronic	ENSG00000249084	NA	NA	NA	NA	NA	4q34.3	NA	NA	NA	NA	rs1054753	0.27	0.27	0.236	0.225639	0.4682	0.0536	0.3141	0.1203	0.2331	0.47	0.06	0.37	0.13	0.374	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.704962	NA	NA	0.478256	0.186564	NA	0.232	NA	3.0128773
1351	3	108639270	108639270	C	T	intronic	GUCA1C	NA	NA	NA	intronic	ENSG00000138472	NA	NA	NA	NA	NA	3q13.13	NA	NA	NA	NA	rs6791441	0.32	0.32	0.322	0.319688	0.3439	0.25	0.2435	0.4357	0.2638	0.36	0.25	0.25	0.41	0.3137	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.169046	NA	NA	0.329728	0.407811	NA	0.304	NA	3.012672
1351	13	42335222	42335222	T	C	intronic	VWA8	NA	NA	NA	intronic	ENSG00000102763	NA	NA	NA	NA	NA	13q14.11	NA	NA	NA	NA	rs9566844	0.28	0.28	0.267	0.261382	0.335	0.2113	0.3329	0.1611	0.3221	0.34	0.23	0.35	0.19	0.3127	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.476047	1.476047	NA	0.339651	0.164548	NA	0.246	NA	3.012649
1351	14	106471353	106471353	C	T	intergenic	ADAM6,LINC00226	dist=32995;dist=272916	NA	NA	exonic	ENSG00000211935	NA	nonsynonymous SNV	ENSG00000211935:ENST00000390595:exon2:c.G244A:p.E82K	NA	NA	14q32.33	NA	NA	NA	NA	rs34069216	0.54	0.54	0.495	0.592252	0.6004	0.7361	0.5735	0.379	0.7372	0.55	0.72	0.53	0.32	0.6166	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.17024	NA	1	0.603785	0.438867	NA	0.514	NA	3.0125484
1351	3	192053274	192053274	G	A	intronic	FGF12	NA	NA	NA	intronic	ENSG00000114279	NA	NA	NA	NA	NA	3q28	NA	NA	NA	NA	rs4571187	0.46	0.46	0.463	0.500799	0.2763	0.622	0.3357	0.6097	0.5767	0.28	0.65	0.35	0.58	0.3979	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.740417	NA	NA	0.313256	0.547889	NA	0.478	NA	3.012544
1351	9	123676482	123676482	T	C	intronic	TRAF1	NA	NA	NA	intronic	ENSG00000056558	NA	NA	NA	NA	NA	9q33.2	NA	Name=Pol2	NA	NA	rs2416805	0.7	0.7	0.706	0.731629	0.6402	0.7242	0.6888	0.7776	0.8016	0.64	0.72	0.69	0.75	0.6846	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.238332	1.238332	NA	0.662791	0.754426	NA	0.645	NA	3.012409
1351	17	4416638	4416638	G	A	intronic	SPNS2	NA	NA	NA	intronic	ENSG00000183018	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs9894697	0.31	0.31	0.315	0.336462	0.325	0.2173	0.3199	0.4266	0.3609	0.33	0.18	0.35	0.41	0.3348	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.557785	NA	NA	0.328029	0.442283	NA	0.377	NA	3.012171
1351	5	7717396	7717396	T	C	intronic	ADCY2	NA	NA	NA	ncRNA_intronic	ENSG00000250761	NA	NA	NA	NA	NA	5p15.31	NA	NA	NA	NA	rs6878196	0.59	0.59	0.569	0.57508	0.4125	0.9494	0.6455	0.3669	0.5879	0.44	0.96	0.59	0.39	0.5013	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.880701	1.880701	NA	0.407438	0.40327	NA	0.471	NA	3.0120953
1351	14	92185731	92185731	G	A	intronic	CATSPERB	NA	NA	NA	intronic	ENSG00000133962	NA	NA	NA	NA	NA	14q32.12	NA	NA	NA	NA	rs17783516	0.34	0.34	0.342	0.377995	0.3181	0.4643	0.317	0.2965	0.5041	0.32	0.45	0.27	0.29	0.3493	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.203195	NA	NA	0.321005	0.322207	ID=COSN164767;OCCURENCE=1(breast)	0.377	NA	3.011595
1351	20	37534582	37534582	A	G	intronic	PPP1R16B	NA	NA	NA	intronic	ENSG00000101445	NA	NA	NA	NA	NA	20q11.23	NA	NA	NA	NA	rs12626105	0.36	0.36	0.351	0.35603	0.338	0.4167	0.3761	0.3381	0.3221	0.34	0.37	0.37	0.38	0.3264	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.498466	NA	NA	0.324535	0.345892	NA	0.261	NA	3.011065
1351	16	71212979	71212979	T	C	intronic	HYDIN	NA	NA	NA	intronic	ENSG00000157423	NA	NA	NA	NA	NA	16q22.2	NA	NA	NA	NA	rs2158102	0.42	0.42	0.4	0.403754	0.2843	0.5804	0.4697	0.3359	0.3896	0.29	0.58	0.43	0.41	0.378	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.08996	NA	NA	0.326977	0.320746	NA	0.355	NA	3.010723
1351	19	14736288	14736288	C	G	intronic	EMR3	NA	NA	NA	intronic	ENSG00000131355	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs34381727	0.24	0.24	NA	0.202476	0.3559	0.0575	0.2939	0.1573	0.1902	0.36	0.08	0.34	0.19	0.2865	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.327975	NA	NA	0.346977	0.178847	NA	0.254	NA	3.010623
1351	19	14741065	14741065	G	A	intronic	EMR3	NA	NA	NA	intronic	ENSG00000131355	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs62124014	0.24	0.24	0.218	0.198083	0.3559	0.0595	0.2939	0.1399	0.1892	0.36	0.08	0.34	0.17	0.2877	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.239061	NA	NA	0.346163	0.166591	NA	0.246	NA	3.010237
1351	2	44292977	44292977	C	T	intergenic	LRPPRC,PPM1B	dist=69833;dist=103023	NA	NA	downstream	ENSG00000219391	NA	NA	NA	NA	NA	2p21	NA	NA	NA	NA	rs7565605	0.4	0.4	0.394	0.414936	0.4901	0.0982	0.451	0.5295	0.4836	0.48	0.11	0.46	0.56	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.912688	NA	NA	NA	NA	NA	0.355	NA	3.0099
1351	17	39680580	39680580	A	C	intronic	KRT19	NA	NA	NA	intronic	ENSG00000171345	NA	NA	NA	NA	NA	17q21.2	NA	Name=Pol2	Name=6	NA	rs1869719	0.97	0.97	0.967	0.967053	1	1	0.9942	0.8782	1	1	1	0.99	0.89	0.9908	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.104021	NA	NA	1	0.908534	NA	0.957	NA	3.0092
1351	3	183802097	183802097	T	C	intergenic	HTR3C,HTR3E	dist=23636;dist=12755	NA	NA	downstream	ENSG00000233576	NA	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs6443941	0.61	0.61	0.64	0.586661	0.4911	0.7381	0.5476	0.7292	0.364	0.49	0.74	0.57	0.69	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.038392	NA	NA	NA	NA	NA	0.478	NA	3.0089
1351	7	29111620	29111620	A	C	intronic	CPVL	NA	NA	NA	intronic	ENSG00000106066	NA	NA	NA	NA	NA	7p14.3	NA	NA	NA	NA	rs317719	0.96	0.96	0.969	0.969848	0.9911	0.874	0.9899	1	0.9918	0.99	0.88	0.98	1	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.681593	NA	NA	NA	NA	NA	0.986	NA	3.0089
1351	2	234762480	234762480	A	T	intronic	HJURP	NA	NA	NA	intronic	ENSG00000123485	NA	NA	NA	NA	NA	2q37.1	NA	Name=Pol2	NA	NA	rs626110	0.58	0.58	0.564	0.522963	0.6859	0.5446	0.6427	0.3684	0.4571	0.71	0.55	0.65	0.37	0.6234	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.181015	NA	NA	0.682093	0.415797	NA	0.667	NA	3.008607
1351	10	99147975	99147975	T	C	intronic	RRP12	NA	NA	NA	intronic	ENSG00000052749	NA	NA	NA	NA	NA	10q24.1	NA	NA	NA	NA	rs869967	0.37	0.37	0.377	0.405152	0.337	0.3125	0.3415	0.5552	0.4131	0.33	0.28	0.33	0.58	0.3397	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.187869	NA	NA	0.315116	0.493872	NA	0.304	NA	3.008184
1351	2	96553772	96553772	G	C	intergenic	TRIM43,FAHD2CP	dist=288303;dist=122527	NA	NA	intronic	ENSG00000174501	NA	NA	NA	NA	NA	2q11.1	NA	NA	NA	NA	rs4907218	0.35	0.35	0.293	0.402356	0.3439	0.6607	0.5288	0.2965	0.2495	0.27	0.58	0.39	0.17	0.3147	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.249794	NA	NA	NA	NA	NA	0.348	NA	3.0080667
1351	4	47886319	47886319	A	C	intronic	NFXL1	NA	NA	NA	intronic	ENSG00000170448	NA	NA	NA	NA	NA	4p12	NA	NA	NA	NA	rs12510002	0.42	0.42	0.438	0.389177	0.327	0.6002	0.3415	0.3298	0.3497	0.35	0.63	0.35	0.33	0.3564	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.734331	NA	NA	0.308837	0.331284	NA	0.471	NA	3.007763
1351	19	49671151	49671151	G	A	intronic	TRPM4	NA	NA	NA	intronic	ENSG00000130529	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs68004247	0.31	0.31	0.297	0.338858	0.33	0.2212	0.2334	0.416	0.4397	0.32	0.19	0.28	0.43	0.3323	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.172108	2.172108	NA	0.330116	0.406718	NA	0.239	NA	3.007584
1351	11	62401716	62401716	A	G	intronic	GANAB	NA	NA	NA	intronic	ENSG00000089597	NA	NA	NA	Score=278;Name=lod=18	NA	11q12.3	NA	NA	NA	NA	rs2957121	0.94	0.94	0.933	0.944089	0.995	1	0.9813	0.8026	0.999	0.99	1	0.98	0.75	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.388035	NA	NA	0.997486	0.849711	NA	0.884	NA	3.007514
1351	4	47880494	47880494	G	A	intronic	NFXL1	NA	NA	NA	intronic	ENSG00000170448	NA	NA	NA	NA	NA	4p12	NA	NA	NA	NA	rs2289435	0.43	0.43	0.43	0.398163	0.328	0.5933	0.3415	0.3691	0.3487	0.35	0.62	0.35	0.38	0.3545	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.359102	NA	NA	0.31	0.347254	NA	0.471	NA	3.0075
1351	2	209030572	209030572	A	G	intronic	C2orf80	NA	NA	NA	intronic	ENSG00000188674	NA	NA	NA	Score=251;Name=lod=14	NA	2q34	NA	NA	NA	NA	rs6721025	0.55	0.55	0.566	0.546925	0.6918	0.3591	0.5274	0.5976	0.5368	0.68	0.33	0.58	0.59	0.6051	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.843172	2.843172	NA	0.695695	0.617631	NA	0.616	NA	3.007405
1351	15	62994928	62994928	G	A	intronic	TLN2	NA	NA	NA	intronic	ENSG00000171914	NA	NA	NA	NA	NA	15q22.2	NA	NA	NA	NA	rs12908653	0.39	0.39	0.363	0.366613	0.3032	0.6875	0.3862	0.2118	0.2965	0.32	0.65	0.37	0.23	0.3521	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.260649	1.260649	NA	0.337442	0.232183	NA	0.319	NA	3.007258
1351	19	51503524	51503524	T	C	intronic	KLK8	NA	NA	NA	ncRNA_intronic	ENSG00000267879	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs1701946	0.53	0.53	0.501	0.535144	0.4254	0.3909	0.5519	0.888	0.3078	0.43	0.39	0.53	0.85	0.4744	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.325063	NA	NA	0.426279	0.817295	NA	0.58	NA	3.0072543
1351	1	20944922	20944922	C	T	intronic	CDA	NA	NA	NA	intronic	ENSG00000158825	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs61781970	0.32	0.32	0.312	0.311502	0.3231	0.244	0.317	0.3805	0.272	0.33	0.25	0.31	0.37	0.3556	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.139858	NA	NA	0.314375	0.396231	ID=COSN162994;OCCURENCE=1(NS)	0.312	NA	3.006925
1351	14	58060862	58060862	G	A	intronic	SLC35F4	NA	NA	NA	intronic	ENSG00000151812	NA	NA	NA	NA	NA	14q22.3	NA	NA	NA	NA	rs17724076	0.26	0.26	0.232	0.257588	0.3608	0.2222	0.2464	0.2073	0.2638	0.34	0.21	0.27	0.21	0.2987	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.25461	NA	NA	0.333577	0.22234	NA	0.319	NA	3.006923
1351	19	36105917	36105917	A	G	intronic	HAUS5	NA	NA	NA	intronic	ENSG00000249115	NA	NA	NA	NA	NA	19q13.12	NA	NA	NA	NA	rs34572637	0.23	0.23	0.218	0.265775	0.3101	0.2808	0.2622	0.0741	0.4663	0.3	0.27	0.27	0.06	0.3811	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.246375	NA	NA	0.301944	0.112819	NA	0.399	NA	3.006856
1351	21	40190620	40190620	C	G	intronic	ETS2	NA	NA	NA	intronic	ENSG00000157557	NA	NA	NA	NA	NA	21q22.2	NA	NA	NA	NA	rs10854389	0.25	0.25	0.239	0.252995	0.331	0.2887	0.255	0.0923	0.3517	0.33	0.26	0.27	0.12	0.3219	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.547291	NA	NA	0.340349	0.150023	NA	0.159	NA	3.006751
1351	7	111629025	111629025	T	A	intronic	DOCK4	NA	NA	NA	intronic	ENSG00000128512	NA	NA	NA	NA	NA	7q31.1	NA	NA	NA	NA	rs17401943	0.19	0.19	0.187	0.167532	0.3459	0.0099	0.1844	0.121	0.1973	0.35	0.01	0.23	0.11	0.2969	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.188915	NA	NA	0.350753	0.153541	NA	0.348	NA	3.006447
1351	17	19231898	19231898	T	C	intronic	EPN2	NA	NA	NA	intronic	ENSG00000072134	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs7206963	0.95	0.95	0.957	0.903554	0.994	0.8542	0.8746	0.9992	0.7526	0.99	0.87	0.89	1	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.440673	NA	NA	NA	NA	NA	0.978	NA	3.006
1351	17	1675127	1675127	C	T	intronic	SERPINF1	NA	NA	NA	UTR5	ENSG00000132386	ENST00000573763:c.-201C>T,ENST00000572048:c.-161C>T	NA	NA	NA	NA	17p13.3	NA	NA	Name=16	NA	rs4274474	0.79	0.79	0.802	0.757987	0.7346	0.7758	0.7507	0.8601	0.6309	0.76	0.79	0.7	0.89	0.7208	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.079083	NA	NA	0.705698	0.845665	NA	0.725	NA	3.0055687
1351	10	99118382	99118382	T	C	intronic	RRP12	NA	NA	NA	intronic	ENSG00000052749	NA	NA	NA	NA	NA	10q24.1	NA	NA	NA	NA	rs2297988	0.39	0.39	0.412	0.425519	0.335	0.3115	0.353	0.6316	0.409	0.33	0.28	0.34	0.64	0.3439	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.802544	NA	NA	0.315698	0.556741	NA	0.355	NA	3.005402
1351	3	123049707	123049707	G	T	intronic	ADCY5	NA	NA	NA	intronic	ENSG00000173175	NA	NA	NA	NA	NA	3q21.1	NA	NA	NA	NA	rs9829332	0.27	0.27	0.268	0.234824	0.3449	0.2421	0.1873	0.2337	0.1493	0.36	0.22	0.2	0.26	0.2982	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.30129	NA	NA	0.351512	0.253518	NA	0.29	NA	3.005388
1351	12	108919390	108919390	T	C	intronic	SART3	NA	NA	NA	UTR3	ENSG00000198855	ENST00000549641:c.*8T>C	NA	NA	NA	NA	12q23.3	NA	NA	NA	NA	rs7963063	0.24	0.24	0.244	0.197684	0.4254	0.0883	0.2161	0.0998	0.1953	0.42	0.11	0.25	0.13	0.3231	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.943746	NA	NA	0.41314	0.139128	NA	0.181	NA	3.0050267
1352	13	97535933	97535933	C	T	intergenic	HS6ST3,LINC00359	dist=44117;dist=57602	NA	NA	downstream	ENSG00000235137	NA	NA	NA	NA	NA	13q32.1	NA	NA	NA	NA	rs869284	0.46	0.46	0.435	0.431709	0.495	0.6399	0.415	0.1346	0.5654	0.51	0.68	0.42	0.15	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.734996	NA	NA	NA	NA	NA	0.326	NA	3.005
1352	5	118837833	118837833	C	T	intronic	HSD17B4	NA	NA	NA	intronic	ENSG00000133835	NA	NA	NA	NA	NA	5q23.1	NA	NA	NA	NA	rs460945	0.25	0.25	0.273	0.274361	0.3529	0.4097	0.3818	0.093	0.2229	0.3	0.31	0.32	0.07	0.3226	0.32	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.375505	NA	NA	0.319726	0.132834	NA	NA	NA	3.004774
1352	10	99148151	99148151	A	G	intronic	RRP12	NA	NA	NA	intronic	ENSG00000052749	NA	NA	NA	NA	NA	10q24.1	NA	NA	NA	NA	rs2275090	0.37	0.37	0.387	0.404153	0.337	0.3125	0.3415	0.5514	0.4131	0.33	0.28	0.33	0.58	0.3398	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.551233	NA	NA	0.318605	0.493872	NA	0.304	NA	3.004595
1352	3	170912469	170912469	T	A	intronic	TNIK	NA	NA	NA	intronic	ENSG00000154310	NA	NA	NA	NA	NA	3q26.31	NA	NA	NA	NA	rs6773641	0.42	0.42	0.42	0.430711	0.34	0.5446	0.4164	0.3918	0.4693	0.34	0.57	0.36	0.42	0.3635	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.909397	NA	NA	0.291919	0.374344	NA	0.442	NA	3.004581
1352	5	149509270	149509270	A	G	intronic	PDGFRB	NA	NA	NA	intronic	ENSG00000113721	NA	NA	NA	NA	NA	5q32	NA	Name=CTCF,FOXA1_(C-20)	NA	NA	rs1864972	0.78	0.78	0.765	0.805312	0.659	0.8492	0.7522	0.9145	0.8006	0.65	0.85	0.74	0.92	0.7136	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.279514	NA	NA	0.623168	0.871708	NA	0.746	NA	3.004232
1352	11	2187071	2187071	T	C	intronic	TH	NA	NA	NA	intronic	ENSG00000180176	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs6578990	0.92	0.92	0.914	0.911741	0.996	1	0.9712	0.6838	1	1	1	0.98	0.68	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.876134	NA	NA	NA	NA	NA	0.884	NA	3.004
1352	14	104167075	104167075	C	T	intronic	KLC1,XRCC3	NA	NA	NA	intronic	ENSG00000126214,ENSG00000126215	NA	NA	NA	NA	NA	14q32.33	NA	Name=Pol2	NA	NA	rs861537	0.55	0.55	0.529	0.495008	0.6889	0.4375	0.5793	0.4206	0.3957	0.7	0.43	0.6	0.4	0.6089	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.499279	NA	NA	0.698282	0.499022	NA	0.551	NA	3.003918
1352	21	44152149	44152149	G	A	intronic	PDE9A	NA	NA	NA	intronic	ENSG00000160191	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs2269153	0.37	0.37	0.365	0.397963	0.327	0.5506	0.2709	0.3139	0.5174	0.32	0.54	0.3	0.29	0.3558	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.302727	NA	NA	0.313605	0.307308	NA	0.341	NA	3.003595
1352	2	201474179	201474179	C	T	intronic	AOX1	NA	NA	NA	intronic	ENSG00000138356	NA	NA	NA	NA	NA	2q33.1	NA	NA	NA	NA	rs17593811	0.4	0.4	0.422	0.378994	0.3231	0.4415	0.3458	0.4304	0.3262	0.33	0.45	0.33	0.5	0.3385	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.003529	NA	NA	0.335349	0.42374	NA	0.5	NA	3.003051
1352	7	134882680	134882680	A	G	intronic	WDR91	NA	NA	NA	intronic	ENSG00000105875	NA	NA	NA	NA	NA	7q33	NA	NA	NA	NA	rs292582	0.95	0.95	0.944	0.948482	0.997	1	0.9798	0.8177	1	0.99	1	0.98	0.83	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.261524	NA	NA	NA	NA	NA	0.942	NA	3.003
1352	13	49865748	49865748	A	G	intronic	CDADC1	NA	NA	NA	intronic	ENSG00000102543	NA	NA	NA	NA	NA	13q14.2	NA	NA	NA	NA	rs6561514	0.96	0.96	0.946	0.954872	0.997	1	0.9726	0.8464	0.999	1	1	0.96	0.84	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.282204	NA	NA	NA	NA	NA	0.928	NA	3.003
1352	18	43328295	43328295	G	A	intronic	SLC14A1	NA	NA	NA	intronic	ENSG00000141469	NA	NA	NA	NA	NA	18q12.3	NA	NA	NA	NA	rs474270	0.17	0.17	0.161	0.176717	0.3439	0.0675	0.2017	0.0242	0.3057	0.33	0.07	0.22	0.03	0.289	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.497264	1.497264	NA	0.364186	0.081026	NA	0.196	NA	3.002914
1352	2	231106244	231106244	G	C	intronic	SP140	NA	NA	NA	intronic	ENSG00000079263	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs2288328	0.33	0.33	0.336	0.34385	0.338	0.3095	0.2939	0.3638	0.3937	0.35	0.35	0.27	0.34	0.3384	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.059942	NA	NA	0.320885	0.342631	NA	0.428	NA	3.002715
1352	11	68838028	68838028	C	T	intronic	TPCN2	NA	NA	NA	intronic	ENSG00000162341	NA	NA	NA	NA	NA	11q13.3	NA	NA	NA	NA	rs3829236	0.38	0.38	0.375	0.41893	0.503	0.2173	0.2839	0.3593	0.7168	0.53	0.24	0.34	0.35	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.58696	NA	NA	0.494343	0.361994	NA	0.435	NA	3.002657
1352	12	21654831	21654831	G	T	UTR5	GOLT1B	NM_016072:c.-27G>T	NA	NA	UTR5	ENSG00000111711	ENST00000542038:c.-6561G>T,ENST00000229314:c.-27G>T,ENST00000540141:c.-27G>T,ENST00000539663:c.-27G>T,ENST00000539025:c.-27G>T,ENST00000542194:c.-27G>T	NA	NA	NA	NA	12p12.1	NA	Name=c-Myc,HEY1,TBP,ELK4,Pol2(b),HA-E2F1,Sin3Ak-20,Pol2-4H8,YY1,Max,ELF1_(SC-631),TAF1,TAF7_(SQ-8),YY1_(C-20),Pol2	NA	NA	rs1060126	0.73	0.73	0.69	0.705671	0.7714	0.9732	0.7723	0.2753	0.8967	0.78	0.98	0.77	0.32	0.7817	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.610077	NA	NA	0.777674	0.376078	NA	0.565	NA	3.0025594
1352	2	27015118	27015118	G	A	intronic	CENPA	NA	NA	NA	intronic	ENSG00000115163	NA	NA	NA	NA	NA	2p23.3	NA	NA	NA	NA	rs13014800	0.26	0.26	0.249	0.240815	0.334	0.2937	0.2378	0.115	0.2628	0.33	0.28	0.28	0.12	0.3199	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.709173	1.709173	NA	0.343837	0.157966	NA	0.268	NA	3.002263
1352	4	138346451	138346451	T	C	intergenic	NONE,PCDH18	dist=NONE;dist=93623	NA	NA	downstream	ENSG00000251440	NA	NA	NA	NA	NA	4q28.3	NA	NA	NA	NA	rs7677973	0.53	0.53	0.522	0.517971	0.498	0.5446	0.5202	0.5756	0.4315	0.51	0.52	0.52	0.58	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.356383	NA	NA	NA	NA	NA	0.565	NA	3.002
1352	12	56629276	56629276	A	C	intronic	SLC39A5	NA	NA	NA	intronic	ENSG00000139540	NA	NA	NA	NA	NA	12q13.3	NA	NA	NA	NA	rs901073	0.87	0.87	0.84	0.841853	0.998	1	0.9409	0.4334	1	1	1	0.95	0.46	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.136834	NA	NA	NA	NA	NA	0.826	NA	3.002
1352	17	62025238	62025238	G	T	intronic	SCN4A	NA	NA	NA	intronic	ENSG00000007314	NA	NA	NA	NA	NA	17q23.3	NA	NA	NA	NA	rs13341114	0.29	0.29	0.248	0.254393	0.34	0.4127	0.2839	0.056	0.2505	0.34	0.39	0.31	0.08	0.3155	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.219772	NA	NA	0.342577	0.107735	NA	0.312	NA	3.001923
1352	10	99140511	99140511	A	G	intronic	RRP12	NA	NA	NA	intronic	ENSG00000052749	NA	NA	NA	NA	NA	10q24.1	NA	NA	NA	NA	rs7078004	0.37	0.37	0.376	0.405551	0.337	0.3125	0.3415	0.556	0.4141	0.33	0.28	0.33	0.58	0.3426	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.876379	NA	NA	0.318488	0.497276	NA	0.304	NA	3.001912
1352	13	61301565	61301565	C	T	intergenic	TDRD3,MIR3169	dist=153552;dist=472367	NA	NA	intergenic	ENSG00000225249,ENSG00000206854	dist=32903;dist=62129	NA	NA	NA	NA	13q21.2	NA	NA	NA	NA	rs9317133	0.3	0.3	0.284	0.264776	0.332	0.4276	0.366	0.1188	0.1534	0.32	0.42	0.33	0.11	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.634739	NA	NA	NA	NA	NA	0.304	NA	3.0013334
1352	3	184766250	184766250	C	T	intronic	VPS8	NA	NA	NA	intronic	ENSG00000156931	NA	NA	NA	NA	NA	3q27.2	NA	NA	NA	NA	rs6766721	0.42	0.42	0.043	0.551717	0.4404	0.6667	0.4914	0.5454	0.5992	0.35	0.55	0.45	0.36	0.4757	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.603596	NA	NA	0.082707	0.12526	NA	NA	NA	3.001193
1352	1	201293970	201293970	C	T	intronic	PKP1	NA	NA	NA	intronic	ENSG00000081277	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs1620046	0.96	0.96	0.96	0.944489	0.999	1	0.987	0.7988	0.998	1	1	0.99	0.83	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.303322	1.303322	NA	NA	NA	NA	0.935	NA	3.001
1352	11	55245643	55245643	T	C	intergenic	OR4A15,OR4C15	dist=109249;dist=76140	NA	NA	ncRNA_exonic	ENSG00000254962	NA	NA	NA	NA	NA	11q11	NA	NA	NA	NA	rs2553191	0.99	0.99	0.982	0.984425	0.999	0.999	0.9914	0.9478	0.999	1	1	0.99	0.95	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.528821	NA	NA	NA	NA	NA	0.971	NA	3.001
1352	4	68829207	68829207	G	A	UTR5	TMPRSS11A	NM_182606:c.-96C>T,NM_001114387:c.-96C>T	NA	NA	ncRNA_UTR5	ENSG00000187054	NA	NA	NA	NA	NA	4q13.2	NA	NA	NA	NA	rs6552134	0.61	0.61	0.607	0.578674	0.7197	0.8165	0.5375	0.2141	0.7106	0.73	0.81	0.59	0.22	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.62709	NA	NA	0.779384	0.297688	NA	0.638	NA	3.000916
1352	1	155313047	155313047	T	C	intronic	ASH1L	NA	NA	NA	intronic	ENSG00000116539	NA	NA	NA	NA	NA	1q22	NA	NA	NA	NA	rs4971051	0.93	0.93	0.909	0.915735	1	0.999	0.9784	0.7073	0.9806	1	1	0.97	0.73	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.703591	NA	NA	NA	NA	NA	0.942	NA	3
1352	11	10795803	10795803	G	T	intronic	CTR9	NA	NA	NA	intronic	ENSG00000198730	NA	NA	NA	NA	NA	11p15.3	NA	NA	NA	NA	rs7103774	0.95	0.95	0.94	0.938099	1	1	0.9798	0.7761	1	1	1	0.98	0.8	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.02472	NA	NA	NA	NA	NA	0.993	NA	3
1352	12	45170006	45170006	T	C	intronic	NELL2	NA	NA	NA	intronic	ENSG00000184613	NA	NA	NA	NA	NA	12q12	NA	NA	NA	NA	rs4768572	0.98	0.98	0.963	0.973243	1	1	0.9957	0.9009	1	1	1	1	0.89	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.857866	NA	NA	NA	NA	NA	0.986	NA	3
1352	18	14156241	14156241	A	T	intergenic	ZNF519,ANKRD20A5P	dist=23752;dist=22855	NA	NA	ncRNA_intronic	ENSG00000175319	NA	NA	NA	NA	NA	18p11.21	NA	NA	NA	NA	rs4528647	0.88	0.88	0.924	0.953474	1	0.999	0.9856	0.8321	1	0.93	0.94	0.91	0.74	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.30991	NA	NA	NA	NA	NA	0.645	NA	3
1352	21	32114822	32114822	T	G	intergenic	KRTAP21-3,KRTAP21-2	dist=23727;dist=4447	NA	NA	ncRNA_exonic	ENSG00000236400	NA	NA	NA	NA	NA	21q22.11	NA	NA	NA	NA	rs62220612	NA	NA	0.98	1	1	1	1	1	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.205411	NA	NA	NA	NA	NA	NA	NA	3
1352	12	52631242	52631242	C	T	intronic	KRT7	NA	NA	NA	intronic	ENSG00000135480	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs12313552	0.27	0.27	0.241	0.258986	0.341	0.2827	0.3285	0.1248	0.2822	0.34	0.26	0.31	0.13	0.3112	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.015143	NA	NA	0.347907	0.164094	NA	0.174	NA	2.999893
1352	13	96270202	96270202	A	T	intronic	DZIP1	NA	NA	NA	intronic	ENSG00000134874	NA	NA	NA	NA	NA	13q32.1	NA	NA	NA	NA	rs17268561	0.29	0.29	0.274	0.270767	0.3559	0.1548	0.219	0.3336	0.2546	0.36	0.14	0.28	0.34	0.2985	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.001853	NA	NA	0.34656	0.325913	NA	0.297	NA	2.99904
1352	10	38982218	38982218	A	T	intergenic	LOC399744,ACTR3BP5	dist=241137;dist=7509	NA	NA	upstream	ENSG00000233867	NA	NA	NA	NA	NA	10p11.1	NA	NA	NA	NA	rs4070216	0.49	0.49	0.462	0.470248	0.501	0.5258	0.5288	0.5045	0.2935	0.49	0.49	0.52	0.46	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.791951	NA	NA	NA	NA	NA	0.101	NA	2.999
1352	16	81241269	81241269	G	A	intronic	PKD1L2	NA	NA	NA	intronic	ENSG00000166473,ENSG00000269323	NA	NA	NA	NA	NA	16q23.2	NA	NA	NA	NA	rs4077826	0.2	0.2	0.182	0.159944	0.3847	0.003	0.2334	0.0855	0.1391	0.37	0.0017	0.3	0.08	0.2692	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.558426	NA	NA	0.347279	0.132817	NA	0.181	NA	2.998821
1352	2	98354139	98354139	G	T	intronic	ZAP70	NA	NA	NA	intronic	ENSG00000115085	NA	NA	NA	NA	NA	2q11.2	NA	NA	NA	NA	rs17488834	0.22	0.22	0.142	0.16234	0.3618	0.0982	0.3228	0.0121	0.1125	0.38	0.1	0.34	0.01	0.2964	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.372127	NA	NA	0.343023	0.070359	NA	0.174	NA	2.998777
1352	9	119977051	119977051	G	T	intronic	ASTN2	NA	NA	NA	intronic	ENSG00000148219	NA	NA	NA	NA	NA	9q33.1	NA	NA	NA	NA	rs7856971	0.33	0.33	0.307	0.321486	0.332	0.4177	0.3646	0.2534	0.273	0.33	0.37	0.36	0.26	0.334	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.407605	NA	NA	0.336058	0.282401	NA	0.297	NA	2.997942
1352	2	135160755	135160755	G	A	intronic	MGAT5	NA	NA	NA	intronic	ENSG00000152127	NA	NA	NA	NA	NA	2q21.3	NA	NA	NA	NA	rs3748900	0.35	0.35	0.362	0.353834	0.339	0.4296	0.3573	0.2201	0.4693	0.33	0.46	0.33	0.24	0.3473	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.099384	NA	NA	0.31612	0.248865	NA	0.435	NA	2.99758
1352	3	101383562	101383562	G	A	intronic	ZBTB11	NA	NA	NA	intronic	ENSG00000066422	NA	NA	NA	NA	NA	3q12.3	NA	NA	NA	NA	rs11712748	0.34	0.34	0.355	0.330671	0.33	0.2917	0.304	0.4637	0.2106	0.32	0.31	0.28	0.43	0.3273	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.92483	NA	NA	0.345349	0.429382	NA	0.275	NA	2.997351
1352	11	67223921	67223921	A	C	intronic	CABP4	NA	NA	NA	intronic	ENSG00000175544	NA	NA	NA	NA	NA	11q13.2	NA	NA	NA	NA	rs1638565	0.5	0.5	0.235	0.506589	0.4235	0.3234	0.5692	0.8752	0.2382	0.42	0.3	0.52	0.86	0.4285	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.731297	NA	NA	0.151106	0.497271	NA	NA	NA	2.996894
1352	3	184295828	184295828	C	A	intronic	EPHB3	NA	NA	NA	intronic	ENSG00000145191,ENSG00000182580	NA	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs4072650	0.33	0.33	0.34	0.330871	0.3608	0.1647	0.2478	0.5378	0.2505	0.34	0.17	0.29	0.52	0.3118	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.159454	NA	NA	0.330581	0.50522	NA	0.37	NA	2.996819
1352	2	27014980	27014980	T	C	intronic	CENPA	NA	NA	NA	intronic	ENSG00000115163	NA	NA	NA	NA	NA	2p23.3	NA	NA	NA	NA	rs12992046	0.26	0.26	0.261	0.242412	0.334	0.2937	0.2378	0.115	0.271	0.33	0.28	0.28	0.12	0.326	0.34	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.702119	NA	NA	0.343605	0.157739	NA	0.268	NA	2.996395
1352	6	51935747	51935747	C	T	intronic	PKHD1	NA	NA	NA	intronic	ENSG00000170927	NA	NA	NA	NA	NA	6p12.2	NA	NA	NA	NA	rs17576809	0.41	0.41	0.364	0.35623	0.504	0.3998	0.6023	0.1127	0.3139	0.51	0.41	0.59	0.13	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.267112	NA	NA	0.5	0.165462	NA	0.464	NA	2.996
1352	19	48250320	48250320	G	C	intronic	GLTSCR2	NA	NA	NA	intronic	ENSG00000105373	NA	NA	NA	NA	NA	19q13.33	NA	NA	Name=24	NA	rs2334293	0.53	0.53	0.524	0.51897	0.672	0.5546	0.5519	0.2186	0.7076	0.68	0.56	0.57	0.25	0.634	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.396044	NA	NA	0.69814	0.300045	NA	0.623	NA	2.99586
1352	12	31310983	31310983	G	A	intergenic	DDX11,FAM60A	dist=53258;dist=122537	NA	NA	ncRNA_exonic	ENSG00000177359	NA	NA	NA	NA	NA	12p11.21	NA	NA	NA	NA	rs7971718	0.22	0.22	0.201	0.219649	0.3738	0.119	0.2017	0.1899	0.2178	0.36	0.12	0.2	0.14	0.2892	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.785333	NA	0.02	0.341419	0.190302	NA	0.13	NA	2.995581
1352	6	168457801	168457801	A	G	exonic	FRMD1	NA	synonymous SNV	FRMD1:NM_001122841:exon11:c.T1422C:p.A474A,FRMD1:NM_024919:exon11:c.T1626C:p.A542A	exonic	ENSG00000153303	NA	synonymous SNV	ENSG00000153303:ENST00000537786:exon10:c.T939C:p.A313A,ENSG00000153303:ENST00000283309:exon11:c.T1626C:p.A542A,ENSG00000153303:ENST00000440994:exon11:c.T1422C:p.A474A	NA	NA	6q27	NA	NA	NA	NA	rs3734898	0.86	0.86	0.861	0.860423	0.8926	0.8482	0.8156	0.8185	0.9284	0.9	0.87	0.79	0.86	0.881	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.121664	NA	NA	0.897573	0.835998	NA	0.891	NA	2.9954936
1352	2	234405374	234405374	A	C	intronic	USP40	NA	NA	NA	intronic	ENSG00000085982	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs2602386	0.38	0.38	0.404	0.408746	0.3608	0.1974	0.2752	0.7761	0.274	0.34	0.17	0.27	0.75	0.3277	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.678631	NA	NA	0.316352	0.679396	NA	0.493	NA	2.995148
1352	5	126479170	126479170	G	A	intergenic	C5orf63,MEGF10	dist=69986;dist=147286	NA	NA	upstream	ENSG00000214743	NA	NA	NA	NA	NA	5q23.2	NA	NA	NA	NA	rs248040	0.39	0.39	0.387	0.357029	0.505	0.3542	0.3703	0.2027	0.407	0.49	0.38	0.42	0.23	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.018183	NA	0.51	NA	NA	NA	0.312	NA	2.995
1353	11	15198772	15198772	G	T	intronic	INSC	NA	NA	NA	intronic	ENSG00000188487	NA	NA	NA	NA	NA	11p15.2	NA	NA	NA	NA	rs1624731	0.65	0.65	0.614	0.645168	0.5219	0.9266	0.7118	0.4486	0.7004	0.53	0.94	0.7	0.44	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.980054	NA	NA	0.483344	0.491329	NA	0.449	NA	2.994756
1353	14	100792093	100792093	C	G	intronic	SLC25A47	NA	NA	NA	intronic	ENSG00000140107	NA	NA	NA	NA	NA	14q32.2	NA	NA	NA	NA	rs9324019	0.44	0.44	0.409	0.377995	0.34	0.5268	0.5591	0.3578	0.1626	0.35	0.57	0.53	0.36	0.359	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.453742	NA	NA	0.306279	0.354063	NA	0.319	NA	2.994721
1353	3	184295008	184295008	C	A	intronic	EPHB3	NA	NA	NA	intronic	ENSG00000145191,ENSG00000182580	NA	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs7644069	0.32	0.32	0.348	0.32488	0.3598	0.1647	0.245	0.5197	0.2474	0.34	0.17	0.29	0.51	0.3172	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.292429	NA	NA	0.328332	0.488198	NA	0.362	NA	2.994668
1353	14	106471388	106471388	C	A	intergenic	ADAM6,LINC00226	dist=33030;dist=272881	NA	NA	exonic	ENSG00000211935	NA	nonsynonymous SNV	ENSG00000211935:ENST00000390595:exon2:c.G209T:p.S70I	NA	NA	14q32.33	NA	NA	NA	NA	rs34874585	0.51	0.51	0.482	0.612021	0.6004	0.7381	0.5764	0.4508	0.7372	0.49	0.67	0.52	0.34	0.628	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.059268	NA	1	0.610412	0.489308	NA	0.551	NA	2.9945214
1353	2	152349026	152349026	G	A	intronic	NEB	NA	NA	NA	intronic	ENSG00000080345,ENSG00000183091	NA	NA	NA	NA	NA	2q23.3	NA	NA	NA	NA	rs2288195	0.7	0.7	0.675	0.638379	0.6769	0.7569	0.7003	0.5749	0.5184	0.66	0.79	0.71	0.63	0.6624	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.81149	NA	NA	0.666425	0.588819	NA	0.696	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000081128.1;CLNDSDB=.;CLNDSDBID=.	2.994275
1353	5	98199077	98199077	T	C	intronic	CHD1	NA	NA	NA	intronic	ENSG00000153922	NA	NA	NA	NA	NA	5q15	NA	NA	NA	NA	rs10069735	0.3	0.3	0.289	0.341254	0.2664	0.3264	0.2738	0.3487	0.4714	0.28	0.29	0.31	0.32	0.4484	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.034806	NA	NA	0.291022	0.367277	NA	0.319	NA	2.994178
1353	1	37796436	37796436	A	G	intergenic	MIR4255,LOC728431	dist=169201;dist=124044	NA	NA	upstream	ENSG00000230451	NA	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	rs4653277	0.52	0.52	0.496	0.498403	0.506	0.4573	0.6196	0.497	0.4489	0.51	0.45	0.62	0.53	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.74424	NA	NA	NA	NA	NA	0.551	NA	2.994
1353	12	125465023	125465023	C	T	intronic	DHX37	NA	NA	NA	intronic	ENSG00000150990	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs4072887	0.4	0.4	0.41	0.407348	0.3241	0.4256	0.2421	0.562	0.3824	0.34	0.43	0.27	0.56	0.3589	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.882055	NA	NA	0.323098	0.5225	NA	0.377	NA	2.993902
1353	17	11737941	11737941	C	T	intronic	DNAH9	NA	NA	NA	intronic	ENSG00000007174	NA	NA	NA	NA	NA	17p12	NA	NA	NA	NA	rs3744586	0.36	0.36	0.319	0.353435	0.3231	0.4137	0.4236	0.2648	0.3926	0.32	0.41	0.41	0.31	0.3469	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.113726	NA	NA	0.336163	0.256468	NA	0.333	NA	2.993837
1353	12	32778039	32778039	A	G	intronic	FGD4	NA	NA	NA	intronic	ENSG00000139132	NA	NA	NA	NA	NA	12p11.21	NA	NA	NA	NA	rs7970584	0.3	0.3	0.318	0.329872	0.341	0.1657	0.2911	0.4175	0.3967	0.33	0.18	0.27	0.4	0.3296	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.228011	NA	NA	0.335698	0.422379	NA	0.225	NA	2.993702
1353	6	99353272	99353272	A	G	intronic	FBXL4	NA	NA	NA	intronic	ENSG00000112234	NA	NA	NA	NA	NA	6q16.1	NA	NA	NA	NA	rs6935315	0.28	0.28	0.202	0.264776	0.3897	0.0308	0.2651	0.382	0.2188	0.41	0.03	0.29	0.36	0.3255	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.913617	NA	NA	0.291279	0.277576	NA	0.362	NA	2.993521
1353	17	56798207	56798207	T	C	intronic	RAD51C	NA	NA	NA	intronic	ENSG00000108384	NA	NA	NA	NA	NA	17q22	NA	NA	NA	NA	rs28363318	0.23	0.23	0.23	0.205272	0.3748	0.001	0.2104	0.261	0.1626	0.35	0.0017	0.25	0.27	0.28	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.203853	NA	NA	0.35186	0.282342	NA	0.326	NA	2.99334
1353	11	67223920	67223920	C	G	intronic	CABP4	NA	NA	NA	intronic	ENSG00000175544	NA	NA	NA	NA	NA	11q13.2	NA	NA	NA	NA	rs1638564	0.5	0.5	0.198	0.506589	0.4235	0.3234	0.5692	0.8752	0.2382	0.42	0.3	0.52	0.85	0.4291	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.992293	NA	NA	0.154715	0.506139	NA	NA	NA	2.992685
1353	15	21904078	21904078	C	G	intergenic	CT60,LOC646214	dist=705445;dist=28436	NA	NA	intergenic	ENSG00000258883,ENSG00000237161	dist=1021;dist=32482	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs56038907	NA	NA	0.29	0.353634	0.341	0.3601	0.3429	0.388	0.3211	NA	NA	NA	NA	NA	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.680281	NA	NA	NA	NA	NA	0.188	NA	2.9923334
1353	9	78938246	78938246	T	C	intronic	PCSK5	NA	NA	NA	intronic	ENSG00000099139	NA	NA	NA	NA	NA	9q21.13	NA	NA	NA	NA	rs2803430	0.31	0.31	0.324	0.321486	0.3529	0.1369	0.2378	0.4667	0.3425	0.36	0.13	0.27	0.49	0.3206	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.480884	NA	NA	0.334254	0.44863	NA	0.283	NA	2.992246
1353	19	54198461	54198461	A	G	upstream;downstream	MIR519B;MIR526B	NA	NA	NA	upstream;downstream	ENSG00000207825;ENSG00000207580	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs11672638	0.19	0.19	0.182	0.186502	0.2316	0.0704	0.17	0.2663	0.1636	0.23	0.05	0.19	0.29	0.2046	0.29	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.625498	NA	NA	0.238554	0.279018	NA	0.21	NA	2.9919126
1353	7	121942847	121942847	G	C	intronic	FEZF1	NA	NA	NA	intronic	ENSG00000128610	NA	NA	NA	NA	NA	7q31.32	NA	NA	Name=14	NA	rs6968786	0.62	0.62	0.581	0.616014	0.6869	0.5913	0.6052	0.5779	0.6278	0.69	0.57	0.59	0.56	0.6508	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.298897	NA	NA	0.670698	0.628915	NA	0.609	NA	2.991602
1353	9	77442616	77442616	C	T	intronic	TRPM6	NA	NA	NA	UTR3	ENSG00000119121	ENST00000359047:c.*7G>A	NA	NA	NA	NA	9q21.13	NA	NA	NA	NA	rs7045949	0.65	0.65	0.64	0.675919	0.5537	0.8085	0.6254	0.674	0.7035	0.53	0.79	0.67	0.66	0.6215	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.938491	NA	NA	NA	NA	NA	0.609	NA	2.9914667
1353	1	158057691	158057691	A	C	intronic	KIRREL	NA	NA	NA	intronic	ENSG00000183853	NA	NA	NA	NA	NA	1q23.1	NA	NA	NA	NA	rs3820676	0.39	0.39	0.403	0.395168	0.3231	0.2649	0.3314	0.6793	0.2648	0.32	0.26	0.36	0.66	0.3479	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.584087	NA	NA	0.338023	0.605765	NA	0.333	NA	2.990977
1353	4	9558041	9558041	T	C	upstream	MIR548I2	NA	NA	NA	upstream	ENSG00000221275	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs11728441	0.52	0.52	0.504	0.466853	0.6759	0.495	0.5447	0.2035	0.5235	0.67	0.5	0.61	0.25	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.387892	NA	NA	NA	NA	NA	0.42	NA	2.9907666
1353	2	29446202	29446202	G	A	intronic	ALK	NA	NA	NA	intronic	ENSG00000171094	NA	NA	NA	NA	NA	2p23.2	NA	NA	NA	NA	rs4622670	0.17	0.17	0.165	0.176518	0.3519	0.0536	0.2219	0.0098	0.316	0.35	0.04	0.23	0.01	0.2896	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.348384	1.348384	NA	0.367791	0.068316	NA	0.196	NA	2.990709
1353	20	37635027	37635027	T	C	intronic	DHX35	NA	NA	NA	intronic	ENSG00000101452	NA	NA	NA	NA	NA	20q12	NA	NA	NA	NA	rs3752298	0.39	0.39	0.387	0.40016	0.3489	0.4286	0.3804	0.4743	0.3374	0.35	0.36	0.36	0.51	0.345	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.601357	NA	NA	0.315581	0.464367	NA	0.341	NA	2.990519
1353	1	200574959	200574959	T	C	intronic	KIF14	NA	NA	NA	intronic	ENSG00000118193	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs2808238	0.3	0.3	0.265	0.288938	0.3519	0.1825	0.3199	0.3464	0.2342	0.35	0.19	0.31	0.33	0.3209	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.868301	NA	NA	0.336737	0.342237	ID=COSN163384;OCCURENCE=1(breast)	0.391	NA	2.990463
1353	9	133554065	133554065	A	G	intronic	PRDM12	NA	NA	NA	intronic	ENSG00000130711	NA	NA	NA	NA	NA	9q34.12	NA	NA	NA	NA	rs7030674	0.41	0.41	0.428	0.427915	0.328	0.4782	0.4611	0.5023	0.3548	0.33	0.48	0.42	0.47	0.3598	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.085309	NA	NA	0.321977	0.449387	NA	0.399	NA	2.990223
1353	19	35875036	35875036	T	C	intergenic	FFAR3,LOC100128682	dist=23647;dist=21473	NA	NA	downstream	ENSG00000268222	NA	NA	NA	NA	NA	19q13.12	NA	NA	NA	NA	rs2188617	0.54	0.54	0.503	0.564896	0.5099	0.4901	0.6196	0.5983	0.6145	0.51	0.48	0.62	0.59	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.11846	NA	NA	NA	NA	NA	0.514	NA	2.9901
1353	2	201488758	201488758	A	G	intronic	AOX1	NA	NA	NA	intronic	ENSG00000138356	NA	NA	NA	NA	NA	2q33.1	NA	NA	Name=10	NA	rs2348021	0.6	0.6	0.554	0.615415	0.6769	0.5645	0.6974	0.5204	0.6748	0.67	0.56	0.69	0.48	0.6658	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.051362	NA	NA	0.667605	0.536925	NA	0.486	NA	2.989695
1353	12	121426594	121426594	G	A	intronic	HNF1A	NA	NA	NA	intronic	ENSG00000135100	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs1169294	0.32	0.32	0.318	0.315296	0.336	0.4008	0.3473	0.1498	0.407	0.32	0.43	0.38	0.16	0.3464	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.301544	NA	NA	0.32814	0.164094	NA	0.261	NA	2.98946
1353	17	11737938	11737938	G	A	intronic	DNAH9	NA	NA	NA	intronic	ENSG00000007174	NA	NA	NA	NA	NA	17p12	NA	NA	NA	NA	rs3744585	0.36	0.36	0.318	0.353435	0.3231	0.4137	0.4236	0.2648	0.3926	0.32	0.41	0.41	0.31	0.3471	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.86879	NA	NA	0.340465	0.258057	NA	0.333	NA	2.989335
1353	16	28618446	28618446	T	C	intronic	SULT1A1	NA	NA	NA	intronic	ENSG00000196502	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs2925623	0.27	0.27	0.186	0.291134	0.335	0.2639	0.4784	0.23	0.2239	0.32	0.21	0.36	0.21	0.3499	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.646462	NA	0.28	0.325814	0.200273	ID=COSN165161;OCCURENCE=1(NS)	0.159	NA	2.989286
1353	19	2851678	2851678	A	T	intronic	ZNF555	NA	NA	NA	ncRNA_intronic	ENSG00000267063	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs11880407	0.38	0.38	0.36	0.405751	0.4374	0.3353	0.3285	0.3661	0.5542	0.42	0.33	0.36	0.39	0.4385	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.550739	NA	NA	0.468953	0.356786	ID=COSN165685;OCCURENCE=1(breast)	0.362	NA	2.9884803
1353	4	110865271	110865271	T	G	intronic	EGF	NA	NA	NA	intronic	ENSG00000138798	NA	NA	NA	NA	NA	4q25	NA	NA	NA	NA	rs10470911	0.33	0.33	0.292	0.321885	0.333	0.2738	0.4611	0.3185	0.2658	0.33	0.28	0.45	0.28	0.3398	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.831033	NA	NA	0.339186	0.313351	NA	0.413	NA	2.988014
1353	20	44259490	44259490	G	A	intronic	WFDC10A,WFDC9	NA	NA	NA	intronic	ENSG00000180205,ENSG00000180305	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs1487323	0.39	0.39	0.402	0.38758	0.325	0.4276	0.3516	0.3949	0.4264	0.31	0.43	0.39	0.46	0.3593	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.988874	NA	NA	0.327907	0.381752	ID=COSN166537;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.297	NA	2.987793
1353	16	84444113	84444113	C	T	intronic	ATP2C2	NA	NA	NA	intronic	ENSG00000064270	NA	NA	NA	NA	NA	16q24.1	NA	NA	NA	NA	rs2291006	0.6	0.6	0.578	0.577077	0.5219	0.8175	0.5937	0.5234	0.4468	0.53	0.82	0.58	0.47	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.958058	NA	NA	0.490572	0.536127	NA	0.543	NA	2.987528
1353	1	169599254	169599254	T	C	intronic	SELP	NA	NA	NA	intronic	ENSG00000174175	NA	NA	NA	NA	NA	1q24.2	NA	NA	NA	NA	rs732314	0.48	0.48	0.495	0.46865	0.5109	0.3343	0.3934	0.6611	0.3569	0.51	0.3	0.43	0.68	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.49684	NA	NA	0.501886	0.622832	NA	0.514	NA	2.987214
1353	19	55142930	55142930	C	T	intronic	LILRB1	NA	NA	NA	intronic	ENSG00000104972	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs3843752	0.47	0.47	0.48	0.45627	0.3022	0.5982	0.4856	0.5734	0.2894	0.3	0.59	0.45	0.6	0.3915	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.399198	NA	NA	0.319419	0.542669	NA	0.507	NA	2.986881
1353	22	32621619	32621619	C	T	intronic	SLC5A4	NA	NA	NA	ncRNA_intronic	ENSG00000242082	NA	NA	NA	NA	NA	22q12.3	NA	NA	NA	NA	rs2294208	0.42	0.42	0.421	0.45028	0.4632	0.1518	0.3329	0.7557	0.4151	0.45	0.13	0.34	0.75	0.4357	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.565764	NA	NA	0.447907	0.70404	NA	0.478	NA	2.9865263
1353	14	22337393	22337393	G	A	intergenic	OR4E2,DAD1	dist=203155;dist=696414	NA	NA	exonic	ENSG00000211788	NA	nonsynonymous SNV	ENSG00000211788:ENST00000390436:exon2:c.G184A:p.G62R	NA	NA	14q11.2	NA	NA	NA	NA	rs876093	0.68	0.68	0.679	0.680511	0.6014	0.7619	0.6282	0.702	0.6861	0.61	0.76	0.62	0.72	0.6382	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.34897	1.34897	0.15	0.607497	0.676501	NA	0.746	NA	2.9862364
1353	15	89449137	89449137	C	G	intronic	MFGE8	NA	NA	NA	intronic	ENSG00000140545	NA	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs3743388	0.42	0.42	0.414	0.442692	0.3201	0.3938	0.4424	0.6422	0.3497	0.32	0.38	0.39	0.63	0.3615	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.581553	NA	NA	0.332635	0.595909	NA	0.514	NA	2.985765
1353	17	33331575	33331575	C	T	UTR3	LIG3	NM_013975:c.*50C>T	NA	NA	UTR3	ENSG00000005156	ENST00000378526:c.*50C>T	NA	NA	NA	NA	17q12	NA	NA	NA	NA	rs1052536	0.32	0.32	0.291	0.304113	0.4742	0.3095	0.3473	0.1104	0.3548	0.48	0.27	0.35	0.12	0.4156	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.087946	NA	NA	0.458256	0.159173	NA	0.304	NA	2.9852774
1353	19	18308508	18308508	C	T	intronic	RAB3A	NA	NA	NA	intronic	ENSG00000105649	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs8109807	0.25	0.25	0.229	0.216054	0.3708	0.0893	0.2536	0.2262	0.1472	0.39	0.08	0.27	0.23	0.3023	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.347343	NA	NA	0.34186	0.251702	ID=COSN165763;OCCURENCE=1(NS)	0.188	NA	2.98504
1354	19	22398525	22398525	A	G	intergenic	ZNF676,ZNF729	dist=18772;dist=70727	NA	NA	intergenic	ENSG00000268079,ENSG00000267872	dist=11720;dist=27531	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs281185	0.44	0.44	0.433	0.46885	0.3489	0.3423	0.3761	0.73	0.4356	0.35	0.32	0.36	0.77	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.597737	NA	NA	NA	NA	NA	0.442	NA	2.9844334
1354	5	176314434	176314434	C	T	intronic	HK3	NA	NA	NA	intronic	ENSG00000160883	NA	NA	NA	NA	NA	5q35.2	NA	NA	NA	NA	rs2278493	0.31	0.31	0.26	0.304113	0.326	0.3958	0.4323	0.0749	0.4059	0.33	0.38	0.45	0.07	0.3487	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.407267	NA	NA	0.34101	0.127326	NA	0.297	NA	2.98429
1354	15	42129158	42129158	G	A	intronic	JMJD7,JMJD7-PLA2G4B	NA	NA	NA	intronic	ENSG00000168970,ENSG00000243789	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs890505	0.25	0.25	0.206	0.248403	0.3559	0.1806	0.4135	0.053	0.3548	0.37	0.17	0.39	0.06	0.3205	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.292125	NA	NA	0.339615	0.107462	NA	0.152	NA	2.983985
1354	17	2929286	2929286	A	C	intronic	RAP1GAP2	NA	NA	NA	intronic	ENSG00000132359	NA	NA	NA	NA	NA	17p13.3	NA	Name=CTCF	NA	NA	rs4072679	0.69	0.69	0.655	0.691294	0.6441	0.6438	0.7205	0.711	0.7413	0.68	0.66	0.73	0.7	0.6937	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.441015	NA	NA	0.678367	0.738141	NA	0.703	NA	2.983833
1354	21	33949059	33949059	G	A	UTR3	TCP10L	NM_144659:c.*25C>T	NA	NA	UTR3	ENSG00000242220	ENST00000300258:c.*25C>T	NA	NA	NA	NA	21q22.11	NA	NA	NA	NA	rs7520	0.47	0.47	0.492	0.50639	0.4553	0.3512	0.4207	0.6944	0.5256	0.44	0.38	0.43	0.65	0.4584	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.918405	NA	NA	0.43593	0.648661	NA	0.5	NA	2.9837034
1354	16	80666886	80666886	T	C	intronic	CDYL2	NA	NA	NA	intronic	ENSG00000166446	NA	NA	NA	NA	NA	16q23.2	NA	NA	NA	NA	rs59675671	0.44	0.44	0.439	0.452077	0.337	0.254	0.5043	0.7852	0.2873	0.33	0.26	0.51	0.75	0.3667	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.241109	NA	NA	0.312674	0.708806	NA	0.486	NA	2.983626
1354	19	49519230	49519230	T	G	downstream	LHB,RUVBL2	NA	NA	NA	UTR3	ENSG00000183207	ENST00000595090:c.*131T>G	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs2013039	0.48	0.48	0.444	0.512181	0.503	0.2798	0.5735	0.6551	0.5245	0.49	0.28	0.52	0.64	0.5136	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.702597	1.702597	NA	NA	NA	ID=COSN165865;OCCURENCE=1(breast)	0.63	NA	2.9834
1354	16	29872361	29872361	G	A	intronic	CDIPT	NA	NA	NA	intronic	ENSG00000103502	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs3815822	0.39	0.39	0.403	0.361222	0.5487	0.13	0.3314	0.497	0.2444	0.56	0.1	0.36	0.49	0.4681	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.20359	NA	NA	NA	NA	NA	0.362	NA	2.9832
1354	15	42133502	42133502	T	C	intronic	JMJD7-PLA2G4B,PLA2G4B	NA	NA	NA	intronic	ENSG00000168970,ENSG00000243708	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs11635415	0.25	0.25	0.18	0.2498	0.3569	0.1865	0.415	0.053	0.3538	0.37	0.17	0.39	0.06	0.3197	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.14691	NA	NA	0.340349	0.110758	NA	0.159	NA	2.983051
1354	17	39280487	39280487	A	C	upstream	KRTAP4-12	NA	NA	NA	upstream	ENSG00000213416	NA	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs6503601	0.67	0.67	0.703	0.663738	0.6839	0.4058	0.6412	0.9554	0.5307	0.69	0.42	0.66	0.95	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.807872	NA	NA	NA	NA	NA	0.797	NA	2.9827666
1354	9	134465410	134465410	G	C	intronic	RAPGEF1	NA	NA	NA	intronic	ENSG00000107263	NA	NA	NA	NA	NA	9q34.13	NA	NA	NA	NA	rs3818580	0.22	0.22	0.198	0.203075	0.3598	0.1548	0.2089	0.059	0.2822	0.35	0.16	0.23	0.08	0.307	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.109376	NA	NA	0.350662	0.089387	ID=COSN168688;OCCURENCE=1(large_intestine)	0.239	NA	2.982538
1354	1	209784927	209784927	G	T	intronic	CAMK1G	NA	NA	NA	intronic	ENSG00000008118	NA	NA	NA	NA	NA	1q32.2	NA	NA	NA	NA	rs2076230	0.32	0.32	0.315	0.319489	0.3429	0.1071	0.2867	0.4735	0.3292	0.35	0.14	0.31	0.47	0.3392	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.888403	NA	NA	0.335465	0.429641	NA	0.384	NA	2.982435
1354	17	8393900	8393900	G	C	intronic	MYH10	NA	NA	NA	intronic	ENSG00000133026	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs2270744	0.36	0.36	0.355	0.379393	0.3181	0.4177	0.3977	0.3419	0.4407	0.32	0.4	0.34	0.39	0.361	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.422002	1.422002	NA	0.338721	0.330458	NA	0.275	NA	2.982179
1354	10	95216623	95216623	A	G	intronic	MYOF	NA	NA	NA	intronic	ENSG00000138119	NA	NA	NA	NA	NA	10q23.33	NA	NA	Name=46	NA	rs701882	0.59	0.59	0.548	0.566693	0.6968	0.5198	0.6268	0.4539	0.591	0.72	0.49	0.66	0.44	0.6422	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.409762	NA	NA	0.678851	0.512446	NA	0.529	NA	2.982149
1354	2	207101611	207101611	C	T	intergenic	GPR1,ZDBF2	dist=18840;dist=37912	NA	NA	upstream	ENSG00000159186	NA	NA	NA	NA	NA	2q33.3	NA	NA	NA	NA	rs9989831	0.59	0.59	0.593	0.627396	0.5179	0.5109	0.6225	0.8593	0.5501	0.5	0.49	0.59	0.82	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.901665	NA	NA	NA	NA	NA	0.565	NA	2.9821
1354	7	2552986	2552986	A	C	intronic	LFNG	NA	NA	NA	intronic	ENSG00000106003	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs286560	0.22	0.22	0.193	0.258786	0.3439	0.1419	0.2651	0.1278	0.4642	0.36	0.12	0.25	0.11	0.3296	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.363918	NA	NA	0.345059	0.16773	NA	0.188	NA	2.981441
1354	1	200567596	200567596	T	G	intronic	KIF14	NA	NA	NA	intronic	ENSG00000118193	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs2809358	0.3	0.3	0.268	0.288538	0.3519	0.1825	0.3213	0.3442	0.2342	0.35	0.19	0.31	0.32	0.3294	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.559722	2.559722	NA	0.337677	0.34189	ID=COSN163383;OCCURENCE=2(breast)	0.391	NA	2.981023
1354	7	38908876	38908876	T	C	intronic	VPS41	NA	NA	NA	intronic	ENSG00000006715	NA	NA	NA	NA	NA	7p14.1	NA	NA	NA	NA	rs3735346	0.21	0.21	0.19	0.152157	0.3777	0.119	0.2161	0.0234	0.0828	0.4	0.09	0.24	0.02	0.2697	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.532406	NA	NA	0.37186	0.086927	NA	0.087	NA	2.98074
1354	2	170099895	170099895	A	C	intronic	LRP2	NA	NA	NA	intronic	ENSG00000081479	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	rs2075255	0.56	0.56	0.505	0.0211661	0.007	0.0149	0.0115	0.0575	NA	0.47	0.47	0.64	0.75	0.5498	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.098102	NA	NA	0.46314	0.726963	NA	0.652	NA	2.98006
1354	16	20855309	20855309	A	G	exonic	LOC81691	NA	synonymous SNV	LOC81691:NM_001199053:exon16:c.A1680G:p.E560E,LOC81691:NM_030941:exon16:c.A1680G:p.E560E	exonic	ENSG00000005189	NA	synonymous SNV	ENSG00000005189:ENST00000261377:exon16:c.A1680G:p.E560E,ENSG00000005189:ENST00000564274:exon16:c.A1680G:p.E560E	NA	NA	16p12.3	NA	NA	NA	NA	rs9929443	0.83	0.83	0.813	0.824281	0.9085	0.8671	0.8876	0.6604	0.8701	0.91	0.85	0.86	0.66	0.8795	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.422844	NA	NA	0.898721	0.70309	NA	0.775	NA	2.9799456
1354	7	142881540	142881540	G	A	downstream	TAS2R39	NA	NA	NA	downstream	ENSG00000236398	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs4726600	0.12	0.12	0.116	0.0922524	0.2535	0.0119	0.1153	0.025	0.0838	0.26	0.02	0.11	0.03	0.2101	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.243776	NA	NA	0.223283	0.049589	NA	0.196	NA	2.9797836
1354	6	161204311	161204311	T	A	intergenic	PLG,MAP3K4	dist=29226;dist=208511	NA	NA	intergenic	ENSG00000122194,ENSG00000223627	dist=29973;dist=32271	NA	NA	NA	NA	6q26	NA	NA	NA	NA	rs12526591	0.48	0.48	0.454	0.474641	0.3539	0.5843	0.5706	0.4766	0.4151	0.36	0.61	0.52	0.49	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.365174	NA	NA	NA	NA	NA	0.399	NA	2.9794334
1354	10	97446206	97446206	G	A	intronic	TCTN3	NA	NA	NA	intronic	ENSG00000119977	NA	NA	NA	NA	NA	10q24.1	NA	NA	NA	NA	rs2297788	0.43	0.43	0.44	0.42512	0.3469	0.7133	0.255	0.4251	0.3292	0.35	0.7	0.26	0.38	0.3546	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.751828	NA	NA	0.319302	0.417385	NA	0.326	NA	2.979198
1354	3	111993915	111993915	A	G	intronic	SLC9C1	NA	NA	NA	intronic	ENSG00000172139	NA	NA	NA	NA	NA	3q13.2	NA	NA	NA	NA	rs4682100	0.33	0.33	0.316	0.309305	0.3519	0.4345	0.304	0.1399	0.3691	0.36	0.48	0.28	0.15	0.3301	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.954072	2.954072	NA	0.338812	0.156497	NA	0.319	NA	2.979188
1354	1	38030696	38030696	T	C	UTR3	DNALI1	NM_003462:c.*34T>C	NA	NA	UTR3	ENSG00000163879	ENST00000296218:c.*34T>C,ENST00000541606:c.*34T>C	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	rs6619	0.45	0.45	0.414	0.410942	0.4692	0.5694	0.562	0.2247	0.3323	0.48	0.53	0.52	0.23	0.4452	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.666793	NA	NA	0.439767	0.250113	ID=COSN163046;OCCURENCE=1(breast)	0.42	NA	2.9791664
1354	6	161204262	161204262	T	C	intergenic	PLG,MAP3K4	dist=29177;dist=208560	NA	NA	intergenic	ENSG00000122194,ENSG00000223627	dist=29924;dist=32320	NA	NA	NA	NA	6q26	NA	NA	NA	NA	rs13216458	0.48	0.48	0.447	0.47484	0.3549	0.5843	0.5706	0.4766	0.4151	0.36	0.61	0.52	0.49	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.690621	NA	NA	NA	NA	NA	0.399	NA	2.9784334
1354	19	39691239	39691239	A	G	intronic	NCCRP1	NA	NA	NA	intronic	ENSG00000188505	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs11672479	0.4	0.4	0.363	0.388778	0.326	0.4236	0.3458	0.4569	0.3558	0.31	0.48	0.41	0.42	0.3632	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.232473	NA	NA	0.332907	0.444394	NA	0.399	NA	2.977893
1354	2	113955074	113955074	G	A	intronic	PSD4	NA	NA	NA	intronic	ENSG00000125637	NA	NA	NA	NA	NA	2q13	NA	NA	NA	NA	rs902695	0.46	0.46	0.442	0.440895	0.4672	0.6498	0.5288	0.1838	0.4836	0.47	0.63	0.49	0.2	0.555	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.459397	2.459397	NA	NA	NA	NA	0.428	NA	2.9778
1354	14	23888665	23888665	A	T	intronic	MYH7	NA	NA	NA	intronic	ENSG00000092054	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs2277475	0.32	0.32	0.336	0.336661	0.3429	0.0952	0.2363	0.6626	0.2096	0.32	0.08	0.27	0.64	0.3167	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.372256	NA	NA	0.362791	0.623922	NA	0.449	NA	2.977609
1354	5	16676103	16676103	T	C	intronic	MYO10	NA	NA	NA	intronic	ENSG00000145555	NA	NA	NA	NA	NA	5p15.1	NA	NA	NA	NA	rs28057	0.29	0.29	0.285	0.308307	0.3111	0.2073	0.3156	0.3185	0.3906	0.29	0.23	0.36	0.3	0.354	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.617584	NA	NA	0.357691	0.314446	NA	0.442	NA	2.977209
1354	4	39864448	39864448	G	A	intronic	PDS5A	NA	NA	NA	intronic	ENSG00000121892	NA	NA	NA	NA	NA	4p14	NA	NA	NA	NA	rs4547806	0.23	0.23	0.221	0.239816	0.3618	0.2361	0.2435	0.0522	0.3691	0.36	0.19	0.25	0.06	0.3158	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.166248	NA	NA	0.345285	0.100055	NA	0.159	NA	2.977115
1354	19	39691136	39691136	C	A	intronic	NCCRP1	NA	NA	NA	intronic	ENSG00000188505	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs11672471	0.39	0.39	0.415	0.381589	0.327	0.4236	0.3473	0.4289	0.3548	0.32	0.48	0.41	0.4	0.3625	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.142479	NA	NA	0.333488	0.414889	NA	0.384	NA	2.977012
1354	5	180055864	180055864	G	A	intronic	FLT4	NA	NA	NA	intronic	ENSG00000037280	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs438464	0.4	0.4	0.045	0.458466	0.5179	0.3115	0.5922	0.4387	0.4806	0.44	0.27	0.48	0.41	0.4711	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.410309	NA	NA	0.034274	0.01938	NA	NA	NA	2.976726
1354	11	46392825	46392825	C	G	intronic	DGKZ	NA	NA	NA	intronic	ENSG00000149091	NA	NA	NA	NA	NA	11p11.2	NA	NA	NA	NA	rs10838601	0.41	0.41	0.463	0.467252	0.337	0.2569	0.2522	0.8041	0.5153	0.34	0.29	0.26	0.79	0.3585	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.781682	NA	NA	0.327867	0.736376	NA	0.442	NA	2.976633
1354	1	24779873	24779873	C	T	intronic	NIPAL3	NA	NA	NA	intronic	ENSG00000001461	NA	NA	NA	NA	NA	1p36.11	NA	NA	NA	NA	rs1883462	0.31	0.31	0.291	0.292532	0.3539	0.3115	0.2695	0.2859	0.2352	0.36	0.28	0.28	0.3	0.3252	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.563547	NA	NA	0.345116	0.317068	NA	0.246	NA	2.975784
1354	12	96384345	96384345	T	C	intronic	HAL	NA	NA	NA	intronic	ENSG00000084110	NA	NA	NA	NA	NA	12q23.1	NA	NA	NA	NA	rs17676826	0.34	0.34	0.327	0.365815	0.336	0.4167	0.2579	0.2905	0.5225	0.33	0.41	0.29	0.29	0.3575	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.515875	NA	NA	0.331047	0.281888	NA	0.275	NA	2.975453
1354	5	179260009	179260009	G	A	intronic	SQSTM1	NA	NA	NA	intronic	ENSG00000161011	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs2241349	0.4	0.4	0.375	0.401358	0.3022	0.6062	0.4582	0.2095	0.5112	0.32	0.65	0.44	0.22	0.3957	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.332688	NA	NA	0.327093	0.249887	NA	0.225	NA	2.975007
1355	16	76389441	76389441	G	A	intronic	CNTNAP4	NA	NA	NA	intronic	ENSG00000152910	NA	NA	NA	NA	NA	16q23.1	NA	NA	NA	NA	rs2866712	0.21	0.21	0.197	0.189297	0.3857	0.0169	0.2507	0.1142	0.2229	0.38	0.02	0.27	0.12	0.2929	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.380778	1.380778	NA	0.346512	0.156051	NA	0.254	NA	2.974888
1355	20	36989302	36989302	C	G	intronic	LBP	NA	NA	NA	intronic	ENSG00000129988	NA	NA	NA	NA	NA	20q11.23	NA	NA	NA	NA	rs1780624	0.64	0.64	0.631	0.649161	0.5	0.88	0.536	0.6566	0.635	0.49	0.88	0.55	0.65	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.172109	NA	NA	0.525141	0.623555	NA	0.587	NA	2.974859
1355	19	38229378	38229378	G	A	UTR3	ZNF573	NM_152360:c.*15C>T,NM_001172690:c.*15C>T,NM_001172692:c.*15C>T,NM_001172691:c.*15C>T,NM_001172689:c.*15C>T	NA	NA	UTR3	ENSG00000189144	ENST00000589632:c.*1894C>T,ENST00000590414:c.*15C>T,ENST00000339503:c.*15C>T,ENST00000357309:c.*15C>T,ENST00000536220:c.*15C>T,ENST00000392138:c.*15C>T,ENST00000586155:c.*1889C>T	NA	NA	NA	NA	19q13.12	NA	Name=SETDB1,ZNF274	NA	NA	rs1291	0.59	0.59	0.577	0.550919	0.83	0.3472	0.696	0.3638	0.6237	0.83	0.35	0.72	0.39	0.7153	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.345212	NA	NA	0.813372	0.449387	NA	0.652	NA	2.9746614
1355	19	15065169	15065169	T	C	intronic	SLC1A6	NA	NA	NA	intronic	ENSG00000105143	NA	NA	NA	NA	NA	19p13.12	NA	NA	Name=9	NA	rs757465	0.73	0.73	0.725	0.75639	0.671	0.7222	0.7305	0.8684	0.7464	0.66	0.71	0.72	0.85	0.6973	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.403287	NA	NA	0.657159	0.835682	NA	0.609	NA	2.974541
1355	3	75571173	75571173	G	A	intergenic	FAM86DP,MIR1324	dist=86907;dist=108741	NA	NA	downstream	ENSG00000243794	NA	NA	NA	NA	NA	3p12.3	NA	NA	NA	NA	rs1703191	0.43	0.43	0.5	0.408347	0.5268	0.4772	0.5447	0.2776	0.2955	0.51	0.43	0.5	0.25	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.091242	NA	NA	NA	NA	NA	NA	NA	2.9732
1355	16	15116521	15116521	C	T	intronic	PDXDC1	NA	NA	NA	intronic	ENSG00000179889	NA	NA	NA	NA	NA	16p13.11	NA	NA	NA	NA	rs4985160	0.5	0.5	0.494	NA	NA	NA	NA	NA	NA	0.53	0.52	0.61	0.37	0.5236	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.615716	NA	NA	0.503605	0.381148	NA	0.551	NA	2.972795
1355	22	50277835	50277835	T	C	exonic	ZBED4	NA	synonymous SNV	ZBED4:NM_014838:exon2:c.T525C:p.S175S	exonic	ENSG00000100426	NA	synonymous SNV	ENSG00000100426:ENST00000216268:exon2:c.T525C:p.S175S	NA	NA	22q13.33	NA	NA	NA	NA	rs910796	0.93	0.93	0.929	0.935304	0.8877	0.9464	0.9352	0.9955	0.8916	0.87	0.94	0.92	0.99	0.9088	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.941981	NA	NA	0.897558	0.977985	NA	0.826	NA	2.9726086
1355	17	15604444	15604444	A	G	intronic	ZNF286A	NA	NA	NA	intronic	ENSG00000187607,ENSG00000255104	NA	NA	NA	NA	NA	17p12	NA	NA	NA	NA	rs4792655	0.53	0.53	0.503	NA	NA	NA	NA	NA	NA	0.55	0.61	0.51	0.45	0.5122	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.719035	NA	NA	0.515465	0.454607	NA	0.341	NA	2.972335
1355	19	48551546	48551546	A	T	UTR3	PLA2G4C	NM_001159322:c.*54T>A,NM_003706:c.*54T>A,NM_001159323:c.*139T>A	NA	NA	UTR3	ENSG00000105499	ENST00000599111:c.*54T>A,ENST00000354276:c.*139T>A	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs9226	0.69	0.69	0.687	0.69369	0.6909	0.8978	0.6931	0.5061	0.7403	0.69	0.89	0.64	0.5	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.578442	1.578442	NA	0.670647	0.564306	NA	0.696	NA	2.9717864
1355	12	132399065	132399065	T	G	intronic	ULK1	NA	NA	NA	intronic	ENSG00000177169	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs12303764	0.24	0.24	0.2	0.201677	0.3598	0.2103	0.2464	0.0159	0.2495	0.36	0.21	0.28	0.04	0.3078	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.293122	NA	NA	0.361137	0.077151	NA	0.239	NA	2.971263
1355	6	81265495	81265495	C	A	intergenic	BCKDHB,FAM46A	dist=209508;dist=1189952	NA	NA	downstream	ENSG00000216352	NA	NA	NA	NA	NA	6q14.1	NA	NA	NA	NA	rs9449067	0.65	0.65	0.635	0.705072	0.5288	0.6746	0.6744	0.8744	0.7106	0.52	0.66	0.64	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.019592	NA	NA	NA	NA	NA	0.674	NA	2.9712
1355	2	113532885	113532885	G	T	intronic	IL1A	NA	NA	NA	intronic	ENSG00000115008	NA	NA	NA	NA	NA	2q13	NA	NA	Name=4	NA	rs3783550	0.58	0.58	0.612	0.620407	0.6779	0.2946	0.5245	0.8048	0.7157	0.68	0.3	0.55	0.77	0.6512	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.221175	NA	NA	0.699884	0.776668	NA	0.623	NA	2.971016
1355	6	24353742	24353742	A	G	intronic	DCDC2	NA	NA	NA	intronic	ENSG00000146038	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs813227	0.4	0.4	0.389	0.395168	0.508	0.4127	0.4654	0.2231	0.4438	0.49	0.42	0.47	0.2	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.75457	NA	NA	0.521082	0.278902	NA	0.507	NA	2.970918
1355	14	100384232	100384232	A	C	intronic	EML1	NA	NA	NA	intronic	ENSG00000066629	NA	NA	NA	NA	NA	14q32.2	NA	NA	NA	NA	rs2273704	0.43	0.43	0.437	0.430511	0.3151	0.4702	0.4654	0.5469	0.3262	0.31	0.44	0.44	0.59	0.3672	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.399942	NA	NA	0.34686	0.493418	NA	0.478	NA	2.97084
1355	22	50696662	50696662	C	T	intronic	MAPK12	NA	NA	NA	intronic	ENSG00000188130	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs73187284	0.29	0.29	0.273	0.279752	0.3579	0.4058	0.219	0.0817	0.3804	0.36	0.39	0.2	0.14	0.3248	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.768213	NA	NA	0.346512	0.136921	NA	0.196	NA	2.970788
1355	22	50278438	50278438	A	G	exonic	ZBED4	NA	synonymous SNV	ZBED4:NM_014838:exon2:c.A1128G:p.P376P	exonic	ENSG00000100426	NA	synonymous SNV	ENSG00000100426:ENST00000216268:exon2:c.A1128G:p.P376P	NA	NA	22q13.33	NA	NA	NA	NA	rs910798	0.92	0.92	0.923	0.934305	0.8877	0.9464	0.9323	0.9924	0.8926	0.87	0.94	0.91	0.99	0.9092	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.337382	NA	NA	0.89907	0.975261	NA	0.826	NA	2.9706966
1355	1	32133737	32133737	C	T	intronic	COL16A1	NA	NA	NA	intronic	ENSG00000084636	NA	NA	NA	NA	NA	1p35.2	NA	NA	NA	NA	rs2292988	0.37	0.37	0.331	0.317093	0.337	0.5883	0.4251	0.0862	0.2526	0.35	0.59	0.42	0.11	0.3432	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.950185	NA	NA	0.349661	0.125198	NA	0.254	NA	2.970139
1355	16	55909163	55909163	T	C	UTR5	CES5A	NM_001143685:c.-30A>G,NM_145024:c.-30A>G	NA	NA	UTR5	ENSG00000159398	ENST00000319165:c.-30A>G,ENST00000290567:c.-30A>G,ENST00000520435:c.-30A>G	NA	NA	NA	NA	16q12.2	NA	NA	NA	NA	rs7194945	0.6	0.6	0.596	0.629193	0.4334	0.7847	0.5893	0.7095	0.59	0.44	0.81	0.59	0.63	0.5108	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.599922	NA	NA	0.419302	0.675387	NA	0.63	NA	2.9698314
1355	12	104341398	104341398	T	A	intronic	HSP90B1	NA	NA	NA	intronic	ENSG00000166598	NA	NA	NA	NA	NA	12q23.3	NA	NA	NA	NA	rs1165695	0.45	0.45	0.43	0.457268	0.337	0.4692	0.4611	0.6369	0.3231	0.33	0.47	0.43	0.63	0.3711	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.075194	NA	NA	0.322209	0.584657	NA	0.399	NA	2.969691
1355	9	73296400	73296400	C	T	intronic	TRPM3	NA	NA	NA	intronic	ENSG00000083067	NA	NA	NA	NA	NA	9q21.12	NA	NA	NA	NA	rs10123161	0.33	0.33	0.302	0.339457	0.3469	0.4504	0.3746	0.2103	0.3671	0.35	0.41	0.35	0.22	0.3447	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.786692	2.786692	NA	0.338837	0.232183	NA	0.304	NA	2.969563
1355	9	97380043	97380043	G	A	intronic	FBP1	NA	NA	NA	intronic	ENSG00000165140	NA	NA	NA	NA	NA	9q22.32	NA	NA	NA	NA	rs8192689	0.36	0.36	0.364	0.360024	0.3519	0.5615	0.2118	0.2776	0.3773	0.35	0.55	0.23	0.26	0.3446	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.649968	NA	NA	0.33407	0.287789	NA	0.384	NA	2.96943
1355	12	49497643	49497643	T	A	intronic	LMBR1L	NA	NA	NA	intronic	ENSG00000139636	NA	NA	NA	NA	NA	12q13.12	NA	NA	NA	NA	rs2047101	0.43	0.43	0.399	0.421526	0.333	0.6756	0.3458	0.233	0.5593	0.34	0.72	0.39	0.26	0.3764	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.44483	NA	NA	0.321279	0.236269	NA	0.377	NA	2.969321
1355	16	81743328	81743328	A	G	intronic	CMIP	NA	NA	NA	intronic	ENSG00000153815	NA	NA	NA	NA	NA	16q23.3	NA	NA	NA	NA	rs68116357	0.34	0.34	0.363	0.361222	0.341	0.256	0.3184	0.4576	0.3906	0.33	0.27	0.33	0.45	0.3422	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.135265	NA	NA	0.347548	0.415653	NA	0.377	NA	2.969252
1355	14	106369335	106369335	G	A	intergenic	ELK2AP,KIAA0125	dist=230191;dist=14503	NA	NA	upstream;downstream	ENSG00000211921;ENSG00000232543	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs2857353	0.27	0.27	0.296	0.275559	0.5308	0.0714	0.3069	0.2216	0.274	0.46	0.07	0.32	0.17	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.955123	NA	NA	NA	NA	NA	0.094	NA	2.9692
1355	17	64737717	64737717	T	A	intronic	PRKCA	NA	NA	NA	intronic	ENSG00000154229	NA	NA	NA	NA	NA	17q24.2	NA	NA	NA	NA	rs3803821	0.56	0.56	0.53	0.546725	0.508	0.5337	0.5476	0.7012	0.3906	0.51	0.5	0.56	0.69	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.26609	NA	NA	0.523256	0.71604	NA	0.529	NA	2.968744
1355	14	104470686	104470686	G	A	intronic	TDRD9	NA	NA	NA	intronic	ENSG00000156414	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs28391043	0.32	0.32	0.33	0.319089	0.3469	0.3393	0.3444	0.2731	0.3139	0.35	0.33	0.31	0.27	0.3488	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.587234	NA	NA	0.335814	0.299365	NA	0.297	NA	2.968486
1355	3	58417416	58417416	C	T	intronic	PDHB	NA	NA	NA	intronic	ENSG00000168291	NA	NA	NA	NA	NA	3p14.3	NA	NA	NA	NA	rs62259772	0.23	0.23	0.245	0.204673	0.3757	0.001	0.2839	0.2133	0.1708	0.36	NA	0.3	0.25	0.2832	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.915633	NA	NA	0.372674	0.21448	NA	0.319	NA	2.968426
1355	11	125617317	125617317	A	G	intronic	PATE1	NA	NA	NA	intronic	ENSG00000171053	NA	NA	NA	NA	NA	11q24.2	NA	NA	NA	NA	rs496459	0.3	0.3	0.298	0.303315	0.336	0.256	0.3055	0.2874	0.3384	0.34	0.26	0.3	0.28	0.3415	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.862761	NA	NA	0.354268	0.298046	NA	0.406	NA	2.968232
1355	4	39259190	39259190	A	G	intronic	WDR19	NA	NA	NA	intronic	ENSG00000157796	NA	NA	NA	NA	NA	4p14	NA	NA	NA	NA	rs11096987	0.28	0.28	0.278	0.28115	0.341	0.1617	0.2478	0.3533	0.2689	0.33	0.16	0.23	0.36	0.3711	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.275566	NA	NA	0.31997	0.336848	NA	0.326	NA	2.96793
1355	6	44107365	44107365	G	A	intronic	TMEM63B	NA	NA	NA	intronic	ENSG00000137216	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs41282654	0.26	0.26	0.254	0.250998	0.34	0.0427	0.3372	0.3177	0.2229	0.34	0.05	0.36	0.3	0.3182	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.21126	2.21126	NA	0.374535	0.319564	NA	0.377	NA	2.967265
1355	2	173344474	173344474	A	G	intronic	ITGA6	NA	NA	NA	intronic	ENSG00000091409	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	rs1920979	0.37	0.37	0.366	0.407149	0.3111	0.3512	0.317	0.5287	0.4632	0.31	0.34	0.36	0.5	0.371	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.26392	NA	NA	0.351279	0.519065	NA	0.493	NA	2.966621
1355	17	41352643	41352643	C	T	intronic	NBR1	NA	NA	NA	intronic	ENSG00000188554	NA	NA	NA	NA	NA	17q21.31	NA	NA	NA	NA	rs35995789	0.3	0.3	0.257	0.336262	0.3588	0.371	0.3631	0.1566	0.501	0.36	0.33	0.38	0.13	0.3453	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.657037	1.657037	NA	0.329564	0.185587	NA	0.254	NA	2.966336
1355	19	54197761	54197761	T	C	upstream;downstream	MIR519B;MIR526B	NA	NA	NA	upstream;downstream	ENSG00000207825;ENSG00000207580	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs10415265	0.25	0.25	0.256	0.254792	0.2356	0.0704	0.1844	0.5144	0.1636	0.23	0.05	0.2	0.53	0.2251	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.085003	NA	NA	0.239671	0.475128	NA	0.319	NA	2.9662956
1355	19	54198559	54198559	A	G	downstream	MIR519B,MIR526B	NA	NA	NA	downstream	ENSG00000207580,ENSG00000207825	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs10420348	0.25	0.25	0.25	0.254792	0.2356	0.0704	0.1844	0.5144	0.1636	0.23	0.05	0.2	0.53	0.225	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.781385	NA	NA	0.23995	0.481505	NA	0.319	NA	2.9661166
1355	12	58018979	58018979	C	T	intronic	SLC26A10	NA	NA	NA	intronic	ENSG00000135502	NA	NA	NA	NA	NA	12q13.3	NA	NA	NA	NA	rs1871417	0.44	0.44	0.439	0.463259	0.3181	0.5804	0.366	0.4334	0.6012	0.34	0.64	0.34	0.44	0.4035	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.878751	NA	NA	0.312326	0.427826	NA	0.428	NA	2.966074
1355	12	666943	666943	A	G	intronic	B4GALNT3	NA	NA	NA	intronic	ENSG00000139044	NA	NA	NA	NA	NA	12p13.33	NA	NA	NA	NA	rs7300933	0.34	0.34	0.329	0.326677	0.338	0.3264	0.2334	0.3608	0.3354	0.35	0.35	0.23	0.4	0.3447	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.01824	NA	NA	0.351512	0.324784	NA	0.355	NA	2.965788
1355	10	104184981	104184981	A	G	intronic	CUEDC2	NA	NA	NA	intronic	ENSG00000107874	NA	NA	NA	NA	NA	10q24.32	NA	NA	NA	NA	rs11593146	0.26	0.26	0.232	0.284545	0.3569	0.1845	0.353	0.1362	0.4652	0.34	0.19	0.37	0.14	0.3419	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5.174989	5.174989	NA	0.335436	0.14713	NA	0.312	NA	2.965764
1355	3	58368449	58368449	T	C	intronic	PXK	NA	NA	NA	intronic	ENSG00000168297	NA	NA	NA	NA	NA	3p14.3	NA	NA	NA	NA	rs11917591	0.23	0.23	0.23	0.200479	0.3767	0.001	0.2839	0.1959	0.1718	0.36	NA	0.3	0.22	0.2854	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.009616	NA	NA	0.372558	0.205629	NA	0.319	NA	2.965342
1355	19	40408146	40408146	G	A	intronic	FCGBP	NA	NA	NA	intronic	ENSG00000090920	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs56186636	0.28	0.28	0.208	0.244409	0.3598	0.2163	0.4049	0.0741	0.271	0.37	0.22	0.41	0.12	0.3243	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.260281	NA	NA	0.350896	0.110304	NA	0.246	NA	2.965004
1356	2	37586681	37586681	A	G	intronic	QPCT	NA	NA	NA	intronic	ENSG00000115828	NA	NA	NA	NA	NA	2p22.2	NA	NA	NA	NA	rs2302651	0.45	0.45	0.479	0.5002	0.3101	0.4137	0.4539	0.7784	0.4417	0.3	0.38	0.49	0.74	0.3998	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.590971	NA	NA	0.325814	0.696185	NA	0.341	NA	2.964286
1356	15	40330629	40330629	C	T	intronic	SRP14	NA	NA	NA	intronic	ENSG00000140319	NA	NA	NA	NA	NA	15q15.1	NA	NA	Name=52	NA	rs8041057	0.48	0.48	0.467	0.454673	0.7028	0.2738	0.4755	0.2882	0.5961	0.71	0.3	0.58	0.28	0.6116	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.43264	2.43264	NA	0.72153	0.394359	NA	0.464	NA	2.96407
1356	14	72944943	72944943	T	G	intronic	RGS6	NA	NA	NA	intronic	ENSG00000182732	NA	NA	NA	NA	NA	14q24.2	NA	NA	NA	NA	rs2239277	0.43	0.43	0.399	0.384585	0.339	0.6359	0.3501	0.326	0.2761	0.34	0.69	0.34	0.31	0.3684	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.848852	NA	NA	0.328797	0.332274	NA	0.442	NA	2.963803
1356	10	50902684	50902684	C	T	UTR3	C10orf53	NM_001042427:c.*36C>T	NA	NA	UTR3	ENSG00000178645	ENST00000374113:c.*680C>T,ENST00000374111:c.*36C>T	NA	NA	NA	NA	10q11.23	NA	NA	NA	NA	rs1055421	0.37	0.37	0.365	0.355431	0.4751	0.1409	0.3732	0.3691	0.4223	0.5	0.16	0.36	0.4	0.4296	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.148422	NA	NA	0.465299	0.361262	NA	0.486	NA	2.9633344
1356	14	100363671	100363671	G	C	intronic	EML1	NA	NA	NA	intronic	ENSG00000066629	NA	NA	NA	NA	NA	14q32.2	NA	NA	NA	NA	rs2273707	0.48	0.48	0.036	0.555511	0.4702	0.5903	0.5548	0.6876	0.4294	0.4	0.49	0.49	0.59	0.5266	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.921302	NA	NA	0.039884	0.08443	NA	NA	NA	2.963316
1356	14	107057350	107057350	A	C	intergenic	LINC00221,NONE	dist=105821;dist=NONE	NA	NA	downstream	ENSG00000253689	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs6576194	0.51	0.51	0.471	0.581869	0.5368	0.505	0.5187	0.6044	0.7219	0.5	0.49	0.47	0.56	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.077893	NA	NA	NA	NA	NA	0.457	NA	2.9632
1356	12	53295058	53295058	G	C	intronic	KRT8	NA	NA	NA	intronic	ENSG00000170421	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs5019800	0.54	0.54	0.54	0.567292	0.5318	0.6042	0.6167	0.3986	0.7587	0.51	0.64	0.57	0.46	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.100804	NA	NA	0.505028	0.415462	NA	0.391	NA	2.963172
1356	2	48956431	48956431	T	A	intronic	LHCGR,STON1-GTF2A1L	NA	NA	NA	intronic	ENSG00000068781,ENSG00000138039,ENSG00000242441	NA	NA	NA	NA	NA	2p16.3	NA	NA	NA	NA	rs11892719	0.62	0.62	0.625	0.605232	0.5378	0.63	0.6513	0.8147	0.3333	0.53	0.62	0.64	0.77	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.088517	NA	NA	0.499057	0.768786	NA	0.667	NA	2.963143
1356	10	116044587	116044587	C	T	intronic	VWA2	NA	NA	NA	intronic	ENSG00000165816	NA	NA	NA	NA	NA	10q25.3	NA	NA	NA	NA	rs10787521	0.38	0.38	0.388	0.416534	0.2942	0.4454	0.33	0.503	0.4571	0.3	0.46	0.29	0.46	0.4599	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.774228	NA	NA	0.28314	0.461591	NA	0.319	NA	2.96276
1356	3	123047478	123047478	A	G	intronic	ADCY5	NA	NA	NA	intronic	ENSG00000173175	NA	NA	NA	NA	NA	3q21.1	NA	NA	NA	NA	rs9855635	0.25	0.25	0.244	0.215256	0.3628	0.244	0.1931	0.0953	0.2117	0.38	0.22	0.21	0.11	0.3044	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.070468	NA	NA	0.370581	0.130504	NA	0.275	NA	2.962219
1356	6	31351887	31351887	C	A	intergenic	HLA-B,MICA	dist=26898;dist=19484	NA	NA	intergenic	ENSG00000225851,ENSG00000272221	dist=1822;dist=10179	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs2507976	0.4	0.4	0.411	0.416534	0.3718	0.2024	0.4366	0.6717	0.3241	0.34	0.23	0.43	0.67	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.456041	NA	NA	NA	NA	NA	0.435	NA	2.9615334
1356	16	28883841	28883841	C	T	intronic	SH2B1	NA	NA	NA	intronic	ENSG00000178188	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs62037369	0.22	0.22	0.178	0.19369	0.328	0.1161	0.4654	0.0136	0.1861	0.34	0.13	0.38	0.01	0.3313	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.09288	NA	NA	0.379419	0.085116	NA	0.123	NA	2.961281
1356	1	237957309	237957309	A	C	intronic	RYR2	NA	NA	NA	intronic	ENSG00000198626	NA	NA	NA	NA	NA	1q43	NA	NA	NA	NA	rs790900	0.74	0.74	0.717	0.750799	0.6431	0.9494	0.7925	0.5772	0.862	0.65	0.96	0.76	0.62	0.7273	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.684462	1.684462	NA	0.668426	0.601385	NA	0.645	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000036685.1;CLNDSDB=.;CLNDSDBID=.	2.961174
1356	3	111985048	111985048	G	A	intronic	SLC9C1	NA	NA	NA	intronic	ENSG00000172139	NA	NA	NA	NA	NA	3q13.2	NA	NA	NA	NA	rs4682099	0.33	0.33	0.336	0.313898	0.3588	0.4345	0.3084	0.1399	0.3824	0.36	0.47	0.29	0.15	0.3332	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.287155	NA	NA	0.347112	0.165229	NA	0.304	NA	2.960888
1356	17	41331460	41331460	G	A	intronic	NBR1	NA	NA	NA	intronic	ENSG00000188554	NA	NA	NA	NA	NA	17q21.31	NA	NA	NA	NA	rs11653231	0.32	0.32	0.291	0.352835	0.3598	0.371	0.3732	0.2133	0.501	0.36	0.33	0.39	0.21	0.354	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.466599	NA	NA	0.325965	0.229258	ID=COSN165433;OCCURENCE=1(breast)	0.275	NA	2.960235
1356	3	111958862	111958862	C	A	intronic	SLC9C1	NA	NA	NA	intronic	ENSG00000172139	NA	NA	NA	NA	NA	3q13.2	NA	NA	NA	NA	rs13089635	0.33	0.33	0.335	0.313898	0.3588	0.4345	0.3084	0.1399	0.3824	0.36	0.47	0.29	0.15	0.3345	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.870299	1.870299	NA	0.346628	0.164548	NA	0.319	NA	2.960072
1356	7	142481376	142481376	T	A	exonic	PRSS2	NA	unknown	UNKNOWN	ncRNA_exonic	ENSG00000250606	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs73740310	0.59	0.59	0.882	0.938898	0.996	0.996	0.9798	0.7882	0.9959	0.69	0.37	0.71	0.6	0.8774	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.49024	NA	NA	NA	NA	NA	0.804	NA	2.9599333
1356	19	17091533	17091533	C	T	intronic	CPAMD8	NA	NA	NA	intronic	ENSG00000160111	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs8100517	0.48	0.48	0.529	0.485024	0.3509	0.5506	0.3602	0.6876	0.3701	0.36	0.55	0.37	0.69	0.3738	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.4079	NA	NA	0.315904	0.597611	NA	0.406	NA	2.959396
1356	9	91661746	91661746	C	G	intronic	SHC3	NA	NA	NA	intronic	ENSG00000148082	NA	NA	NA	NA	NA	9q22.1	NA	NA	NA	NA	rs7022911	0.35	0.35	0.352	0.340256	0.3419	0.0109	0.4006	0.6936	0.1575	0.36	0.01	0.4	0.67	0.3416	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.82409	NA	NA	0.357442	0.62778	NA	0.326	NA	2.959058
1356	19	15789257	15789257	T	C	intronic	CYP4F12	NA	NA	NA	intronic	ENSG00000186204	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs34521056	0.61	0.61	0.569	NA	NA	NA	NA	NA	NA	0.49	0.74	0.59	0.66	0.5596	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.531136	NA	NA	0.481736	0.650935	NA	0.522	NA	2.958664
1356	1	112237915	112237915	A	T	intronic	RAP1A	NA	NA	NA	intronic	ENSG00000116473	NA	NA	NA	NA	NA	1p13.2	NA	NA	NA	NA	rs7525307	0.33	0.33	0.301	0.322684	0.337	0.4375	0.3285	0.1641	0.3998	0.32	0.44	0.37	0.16	0.3599	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.09865	NA	NA	0.344502	0.19078	NA	0.297	NA	2.958598
1356	5	5303614	5303614	C	T	intronic	ADAMTS16	NA	NA	NA	intronic	ENSG00000145536	NA	NA	NA	NA	NA	5p15.32	NA	NA	NA	NA	rs11134110	0.33	0.33	0.33	0.311102	0.3638	0.5218	0.2565	0.0825	0.3875	0.38	0.5	0.29	0.08	0.3466	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.04266	NA	NA	0.331009	0.113409	NA	0.326	NA	2.958591
1356	1	170511604	170511604	T	C	intronic	GORAB	NA	NA	NA	intronic	ENSG00000120370	NA	NA	NA	NA	NA	1q24.2	NA	NA	NA	NA	rs7538037	0.36	0.36	0.348	0.369808	0.3211	0.6776	0.3761	0.0454	0.5368	0.32	0.66	0.36	0.06	0.3837	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.61519	2.61519	NA	0.336668	0.091054	NA	0.283	NA	2.958532
1356	7	50571779	50571779	G	A	intronic	DDC	NA	NA	NA	intronic	ENSG00000132437	NA	NA	NA	NA	NA	7p12.1	NA	NA	NA	NA	rs11575375	0.32	0.32	0.338	0.324481	0.3797	0.1062	0.3444	0.4228	0.3456	0.37	0.14	0.31	0.46	0.3334	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.466346	NA	NA	0.328372	0.433727	ID=COSN168054;OCCURENCE=1(large_intestine)	0.413	NA	2.958528
1356	3	53779825	53779825	A	G	intronic	CACNA1D	NA	NA	NA	intronic	ENSG00000157388	NA	NA	NA	NA	NA	3p21.1	NA	NA	NA	NA	rs3821860	0.22	0.22	0.222	0.232228	0.3459	0.1528	0.2493	0.146	0.3016	0.35	0.12	0.25	0.13	0.3194	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.741934	NA	NA	0.376395	0.191784	NA	0.21	NA	2.958305
1356	19	985997	985997	C	G	intronic	WDR18	NA	NA	NA	intronic	ENSG00000065268	NA	NA	NA	NA	NA	19p13.3	NA	Name=USF-1	NA	NA	rs2074574	0.55	0.55	0.538	0.557708	0.7247	0.4028	0.5317	0.5703	0.547	0.73	0.35	0.52	0.55	0.6307	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.926746	NA	NA	0.686395	0.564685	NA	0.558	NA	2.958205
1356	9	139649580	139649580	G	A	intronic	LCN8	NA	NA	NA	intronic	ENSG00000204001	NA	NA	NA	NA	NA	9q34.3	NA	NA	Name=6	NA	rs879467	0.59	0.59	0.588	0.540136	0.6909	0.7133	0.549	0.2867	0.5429	0.67	0.73	0.58	0.3	0.6704	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.593542	NA	NA	0.6805	0.368687	NA	0.609	NA	2.9582
1356	2	15768981	15768981	C	G	intronic	DDX1	NA	NA	NA	intronic	ENSG00000079785	NA	NA	NA	NA	NA	2p24.3	NA	NA	NA	NA	rs62122280	0.2	0.2	0.154	0.158347	0.3887	0.0149	0.2939	0.0144	0.1677	0.4	0.01	0.33	0.03	0.2895	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.728108	NA	NA	0.363689	0.073536	NA	0.196	NA	2.958111
1356	14	23887645	23887645	T	C	intronic	MYH7	NA	NA	NA	intronic	ENSG00000092054	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs7159367	0.34	0.34	0.36	0.351238	0.3429	0.0952	0.2378	0.7171	0.2096	0.32	0.08	0.28	0.71	0.336	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.456791	NA	NA	0.363425	0.671435	NA	0.464	NA	2.957675
1356	8	81905314	81905314	A	C	intronic	PAG1	NA	NA	NA	intronic	ENSG00000076641	NA	NA	NA	NA	NA	8q21.13	NA	NA	NA	NA	rs2016459	0.49	0.49	0.499	0.521565	0.329	0.499	0.3141	0.8608	0.4315	0.33	0.52	0.35	0.84	0.3905	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.099906	NA	NA	0.322907	0.742397	NA	0.449	NA	2.957593
1356	19	11168896	11168896	A	G	intronic	SMARCA4	NA	NA	NA	intronic	ENSG00000127616	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs8104480	0.33	0.33	0.261	0.387181	0.3638	0.1607	0.2305	0.5915	0.4796	0.36	0.13	0.28	0.56	0.3461	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.627109	NA	NA	0.332984	0.526328	NA	0.428	NA	2.957116
1356	21	43281651	43281651	C	G	intronic	PRDM15	NA	NA	NA	intronic	ENSG00000141956	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs7280316	0.36	0.36	0.397	0.372404	0.3459	0.3036	0.3372	0.4599	0.3773	0.35	0.32	0.33	0.47	0.3604	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.256362	NA	NA	0.336744	0.428507	NA	0.377	NA	2.956956
1356	8	52028849	52028849	G	T	intergenic	SNTG1,PXDNL	dist=323422;dist=203288	NA	NA	intergenic	ENSG00000201316,ENSG00000253664	dist=101124;dist=141399	NA	NA	NA	NA	8q11.21	NA	NA	NA	NA	rs4873179	0.45	0.45	0.461	0.502596	0.3767	0.3681	0.4366	0.6778	0.5808	0.36	0.39	0.43	0.67	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.308668	NA	NA	NA	NA	NA	0.558	NA	2.9566334
1356	20	3759528	3759528	C	T	intronic	SPEF1	NA	NA	NA	intronic	ENSG00000101222	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs2281478	0.53	0.53	0.513	0.509984	0.498	0.623	0.5576	0.4592	0.4407	0.5	0.62	0.53	0.49	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.441831	NA	NA	0.545569	0.464595	NA	0.551	NA	2.956431
1356	10	123681962	123681962	T	C	intronic	ATE1	NA	NA	NA	intronic	ENSG00000107669	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs10887023	0.28	0.28	0.256	0.286342	0.3221	0.2996	0.3617	0.0893	0.4489	0.33	0.32	0.39	0.09	0.3825	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.105055	NA	NA	0.339055	0.124018	NA	0.341	NA	2.956345
1356	9	102713591	102713591	T	C	intronic	STX17	NA	NA	NA	intronic	ENSG00000136874	NA	NA	NA	NA	NA	9q31.1	NA	NA	NA	NA	rs3739794	0.47	0.47	0.451	0.453275	0.3221	0.7202	0.415	0.447	0.3487	0.34	0.72	0.41	0.42	0.3936	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.6676	NA	NA	0.328797	0.416704	NA	0.333	NA	2.955503
1356	22	40708679	40708679	T	C	intronic	TNRC6B	NA	NA	NA	intronic	ENSG00000100354	NA	NA	NA	NA	NA	22q13.1	NA	NA	NA	NA	rs2072858	0.35	0.35	0.304	0.347444	0.33	0.4375	0.5086	0.121	0.4642	0.34	0.45	0.48	0.13	0.3807	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.274608	NA	NA	0.333975	0.165986	NA	0.384	NA	2.955325
1356	6	42924041	42924041	C	T	intergenic	CNPY3,GNMT	dist=17033;dist=4459	NA	NA	downstream	ENSG00000181524	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs112122607	0.48	0.48	0.429	0.494609	0.5447	0.1716	0.428	0.7632	0.4601	0.55	0.19	0.43	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.083353	NA	NA	NA	NA	NA	0.587	NA	2.9553
1356	22	23101559	23101559	G	T	intergenic	GGTLC2,MIR650	dist=111191;dist=63711	NA	NA	exonic	ENSG00000211666	NA	nonsynonymous SNV	ENSG00000211666:ENST00000390312:exon2:c.G213T:p.E71D	NA	NA	22q11.22	NA	NA	NA	NA	rs4134484	0.7	0.7	0.652	0.710863	0.6342	0.8621	0.7435	0.6619	0.6769	0.63	0.85	0.71	0.63	0.6478	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.354458	NA	0.83	0.596144	0.607009	ID=COSN229356;OCCURENCE=1(skin)	0.514	NA	2.9551894
1356	20	33894463	33894463	A	G	intronic	UQCC	NA	NA	NA	UTR3	ENSG00000101019	ENST00000542501:c.*193T>C	NA	NA	NA	NA	20q11.22	NA	NA	NA	NA	rs878639	0.43	0.43	0.446	0.496206	0.3847	0.2808	0.2954	0.7859	0.5838	0.4	0.25	0.33	0.76	0.4325	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.641813	NA	NA	0.394302	0.697912	NA	0.493	NA	2.9551647
1356	4	153881835	153881835	C	T	intronic	FHDC1	NA	NA	NA	intronic	ENSG00000137460	NA	NA	NA	NA	NA	4q31.3	NA	NA	NA	NA	rs3811834	0.35	0.35	0.303	0.339058	0.3449	0.495	0.4107	0.0946	0.4519	0.35	0.51	0.43	0.09	0.3538	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.934789	NA	NA	0.346163	0.145256	NA	0.188	NA	2.955137
1357	5	145252574	145252574	C	T	upstream	GRXCR2	NA	NA	NA	upstream	ENSG00000204928	NA	NA	NA	Score=304;Name=lod=23	NA	5q32	NA	NA	NA	NA	rs10037373	0.62	0.62	0.613	0.649161	0.5467	0.7212	0.6902	0.6112	0.7025	0.54	0.7	0.64	0.63	0.6178	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.124801	NA	NA	0.547209	0.596913	NA	0.674	NA	2.9549576
1357	1	15834297	15834297	G	A	intronic	CASP9	NA	NA	NA	intronic	ENSG00000132906	NA	NA	NA	NA	NA	1p36.21	NA	NA	NA	NA	rs2020903	0.6	0.6	0.595	0.584265	0.5149	0.6538	0.4986	0.739	0.4356	0.54	0.63	0.5	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.133497	NA	NA	0.53017	0.703757	ID=COSN162962;OCCURENCE=1(breast)	0.449	NA	2.95493
1357	14	100363672	100363672	A	G	intronic	EML1	NA	NA	NA	intronic	ENSG00000066629	NA	NA	NA	NA	NA	14q32.2	NA	NA	NA	NA	rs2273706	0.48	0.48	0.088	0.557508	0.4702	0.5913	0.5576	0.6921	0.4305	0.39	0.49	0.49	0.6	0.527	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.527979	NA	NA	0.048256	0.103495	NA	NA	NA	2.954544
1357	16	28837203	28837203	T	G	intronic	ATXN2L	NA	NA	NA	intronic	ENSG00000168488	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs62036622	0.22	0.22	0.186	0.197684	0.33	0.1161	0.4669	0.0265	0.1861	0.34	0.13	0.39	0.02	0.3315	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.43719	NA	NA	0.38407	0.095585	ID=COSN165164;OCCURENCE=1(breast)	0.123	NA	2.95443
1357	12	52864240	52864240	G	T	intronic	KRT6C	NA	NA	NA	intronic	ENSG00000170465	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs415580	0.33	0.33	0.323	0.2502	0.3628	0.4812	0.2651	0.0242	0.1912	0.36	0.56	0.32	0.04	0.3153	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.096432	NA	NA	0.367558	0.07172	NA	0.362	NA	2.954342
1357	2	228996672	228996672	G	A	intronic	SPHKAP	NA	NA	NA	intronic	ENSG00000153820	NA	NA	NA	NA	NA	2q36.3	NA	NA	NA	NA	rs4585022	0.37	0.37	0.324	0.347045	0.339	0.4901	0.5173	0.2254	0.2515	0.33	0.47	0.49	0.22	0.3523	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.689755	NA	NA	0.354535	0.239446	NA	0.312	NA	2.954165
1357	12	52865548	52865548	G	C	intronic	KRT6C	NA	NA	NA	intronic	ENSG00000170465	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs28759265	0.33	0.33	0.3	0.2498	0.3628	0.4812	0.2651	0.0242	0.1892	0.36	0.56	0.32	0.04	0.3153	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.638547	NA	NA	0.367791	0.07172	NA	0.355	NA	2.954109
1357	6	70944465	70944465	A	G	intronic	COL9A1	NA	NA	NA	ncRNA_intronic	ENSG00000253809	NA	NA	NA	NA	NA	6q13	NA	NA	NA	NA	rs12191701	0.25	0.25	0.253	0.21865	0.497	0.0427	0.2334	0.0961	0.2689	0.49	0.04	0.26	0.13	0.3813	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.274537	NA	NA	0.501512	0.157059	NA	0.333	NA	2.9535213
1357	3	97916050	97916050	A	C	intergenic	OR5H15,OR5H6	dist=27565;dist=67079	NA	NA	upstream	ENSG00000249321	NA	NA	NA	NA	NA	3q11.2	NA	NA	NA	NA	rs11706357	0.58	0.58	0.574	0.591853	0.5467	0.494	0.5029	0.7731	0.5573	0.54	0.55	0.46	0.75	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.361712	NA	NA	NA	NA	NA	0.449	NA	2.9533
1357	9	112918581	112918581	T	C	intronic	AKAP2,PALM2-AKAP2	NA	NA	NA	intronic	ENSG00000157654,ENSG00000241978	NA	NA	NA	Score=463;Name=lod=102	NA	9q31.3	NA	NA	NA	NA	rs7862044	0.81	0.81	0.815	0.794129	0.668	0.9702	0.7406	0.829	0.7331	0.69	0.97	0.7	0.87	0.7236	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.504229	3.504229	NA	0.655581	0.815025	NA	0.877	NA	2.952819
1357	6	30883920	30883920	C	T	intronic	VARS2	NA	NA	NA	intronic	ENSG00000137411	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs1264299	0.24	0.24	0.23	0.222045	0.3559	0.247	0.2075	0.0983	0.2362	0.35	0.28	0.2	0.06	0.3203	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.256089	2.256089	NA	0.371512	0.139809	NA	0.275	NA	2.952288
1357	19	7506668	7506668	T	G	intronic	ARHGEF18	NA	NA	NA	intronic	ENSG00000104880,ENSG00000268861	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs2287909	0.36	0.36	0.33	0.371206	0.332	0.4216	0.4107	0.289	0.4427	0.32	0.4	0.4	0.35	0.362	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.412385	NA	NA	0.353837	0.311394	ID=COSN165705;OCCURENCE=1(breast)	0.413	NA	2.952163
1357	21	37583804	37583804	C	T	intronic	DOPEY2	NA	NA	NA	intronic	ENSG00000142197	NA	NA	NA	NA	NA	21q22.12	NA	NA	NA	NA	rs2239568	0.32	0.32	0.31	0.328275	0.337	0.4851	0.3098	0.1135	0.4611	0.34	0.47	0.33	0.11	0.3535	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.670997	NA	NA	0.357442	0.169768	NA	0.239	NA	2.952058
1357	9	96392371	96392371	G	A	intronic	PHF2	NA	NA	NA	intronic	ENSG00000197724	NA	NA	NA	NA	NA	9q22.31	NA	NA	NA	NA	rs10992813	0.26	0.26	0.23	0.196685	0.3668	0.2877	0.2651	0.0151	0.1247	0.38	0.29	0.28	0.02	0.3011	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.916853	NA	NA	0.380233	0.075579	NA	0.283	NA	2.951867
1357	6	30889120	30889120	A	G	intronic	VARS2	NA	NA	NA	intronic	ENSG00000137411	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs2532943	0.24	0.24	0.246	0.222045	0.3559	0.247	0.2075	0.0983	0.2362	0.35	0.28	0.2	0.06	0.3223	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.056342	NA	NA	0.369995	0.139419	NA	0.283	NA	2.951805
1357	4	942006	942006	G	A	intronic	TMEM175	NA	NA	NA	intronic	ENSG00000127419	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs2290403	0.3	0.3	0.301	0.291933	0.3509	0.1984	0.2824	0.3434	0.2648	0.34	0.21	0.31	0.33	0.3306	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.00049	NA	NA	0.367065	0.352601	NA	0.326	NA	2.951435
1357	7	142045449	142045449	A	G	intergenic	LOC730441,MTRNR2L6	dist=73381;dist=328682	NA	NA	intronic	ENSG00000211745	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs371824542	NA	NA	0.252	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3318	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.364226	NA	NA	0.383568	0.267911	NA	0.232	NA	2.9512987
1357	3	108682218	108682218	A	G	intronic	MORC1	NA	NA	NA	intronic	ENSG00000114487	NA	NA	NA	NA	NA	3q13.13	NA	NA	NA	NA	rs2715755	0.3	0.3	0.311	0.313099	0.3678	0.1071	0.245	0.4206	0.3722	0.37	0.08	0.3	0.43	0.3276	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.244548	NA	NA	0.353304	0.437557	NA	0.384	NA	2.951296
1357	12	29486745	29486745	T	C	UTR3	FAR2	NM_001271783:c.*18T>C,NM_018099:c.*18T>C,NM_001271784:c.*18T>C	NA	NA	UTR3	ENSG00000064763	ENST00000536681:c.*18T>C,ENST00000182377:c.*18T>C,ENST00000547116:c.*18T>C,ENST00000547759:c.*217T>C	NA	NA	NA	NA	12p11.22	NA	NA	NA	NA	rs1052583	0.45	0.45	0.445	0.44349	0.4742	0.5754	0.3545	0.3601	0.4519	0.47	0.54	0.35	0.39	0.441	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.994865	NA	NA	0.467442	0.369496	NA	0.435	NA	2.9506914
1357	3	97926221	97926221	T	C	intergenic	OR5H15,OR5H6	dist=37736;dist=56908	NA	NA	upstream	ENSG00000249975	NA	NA	NA	NA	NA	3q11.2	NA	NA	NA	NA	rs7430016	0.61	0.61	0.618	0.627995	0.5497	0.494	0.5187	0.8979	0.5593	0.54	0.56	0.49	0.87	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.535118	NA	NA	NA	NA	NA	0.565	NA	2.9503
1357	3	97940801	97940801	C	T	intergenic	OR5H15,OR5H6	dist=52316;dist=42328	NA	NA	upstream	ENSG00000248507	NA	NA	NA	NA	NA	3q11.2	NA	NA	NA	NA	rs4857350	0.62	0.62	0.652	0.621206	0.5497	0.494	0.5144	0.8744	0.5593	0.55	0.56	0.49	0.88	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.846148	NA	NA	NA	NA	NA	0.536	NA	2.9503
1357	3	97940846	97940846	C	T	intergenic	OR5H15,OR5H6	dist=52361;dist=42283	NA	NA	upstream	ENSG00000248507	NA	NA	NA	NA	NA	3q11.2	NA	NA	NA	NA	rs4857351	0.62	0.62	0.652	0.620807	0.5497	0.494	0.5144	0.8737	0.5583	0.55	0.56	0.49	0.88	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.95063	NA	NA	NA	NA	NA	0.565	NA	2.9503
1357	14	107160325	107160325	G	A	intergenic	LINC00221,NONE	dist=208796;dist=NONE	NA	NA	upstream	ENSG00000253703	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs4387508	0.63	0.63	0.655	0.674521	0.5497	0.5109	0.5231	0.9516	0.7045	0.55	0.48	0.57	0.95	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.630395	NA	NA	NA	NA	NA	0.703	NA	2.9503
1357	15	42170499	42170499	T	G	intronic	SPTBN5	NA	NA	NA	intronic	ENSG00000137877	NA	NA	NA	NA	NA	15q15.1	NA	Name=GATA3_(SC-268),ERalpha_a	NA	NA	rs1201690	0.81	0.81	0.799	0.808307	0.659	0.9712	0.7738	0.857	0.7526	0.67	0.98	0.78	0.84	0.7286	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.703454	NA	NA	0.662191	0.826913	NA	0.768	NA	2.950209
1357	2	239184581	239184581	G	A	intronic	PER2	NA	NA	NA	intronic	ENSG00000132326	NA	NA	NA	NA	NA	2q37.3	NA	NA	NA	NA	rs10462023	0.22	0.22	0.205	0.225639	0.3628	0.2292	0.2522	0.0393	0.3139	0.34	0.21	0.23	0.06	0.3142	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.379559	NA	NA	0.372907	0.092828	NA	0.304	NA	2.950093
1357	3	111870228	111870228	C	T	intronic	SLC9C1	NA	NA	NA	intronic	ENSG00000172139	NA	NA	NA	NA	NA	3q13.2	NA	NA	NA	NA	rs6781137	0.33	0.33	0.333	0.313099	0.3579	0.4335	0.3098	0.1392	0.3804	0.36	0.47	0.29	0.15	0.3349	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.266706	NA	NA	0.357107	0.162671	NA	0.319	NA	2.950093
1357	2	29543663	29543663	T	C	exonic	ALK	NA	synonymous SNV	ALK:NM_004304:exon7:c.A1500G:p.Q500Q	exonic	ENSG00000171094	NA	synonymous SNV	ENSG00000171094:ENST00000389048:exon7:c.A1500G:p.Q500Q	NA	NA	2p23.2	NA	NA	NA	NA	rs2293564	0.8	0.8	0.778	0.776558	0.9235	0.9206	0.8847	0.4334	0.864	0.92	0.92	0.88	0.43	0.8716	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.61167	NA	NA	0.922209	0.534725	NA	0.761	NA	2.9493576
1357	1	10322054	10322054	G	A	intronic	KIF1B	NA	NA	NA	intronic	ENSG00000054523	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs4846209	0.37	0.37	0.342	0.339856	0.3579	0.3472	0.3833	0.3411	0.2812	0.35	0.37	0.4	0.35	0.3446	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.192362	NA	NA	0.348837	0.332274	NA	0.326	NA	2.948663
1357	19	11107133	11107133	T	C	intronic	SMARCA4	NA	NA	NA	intronic	ENSG00000127616	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs2304087	0.3	0.3	0.316	0.332268	0.3569	0.2659	0.2118	0.326	0.4693	0.34	0.26	0.27	0.32	0.3465	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.189709	NA	NA	0.34814	0.315025	NA	0.246	NA	2.94846
1357	14	100803364	100803364	A	G	intronic	WARS	NA	NA	NA	ncRNA_intronic	ENSG00000258666	NA	NA	NA	NA	NA	14q32.2	NA	NA	Name=7	NA	rs2234530	0.76	0.76	0.752	0.777756	0.8072	0.87	0.8631	0.6051	0.8252	0.78	0.85	0.82	0.59	0.7943	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.349621	NA	NA	0.783488	0.628007	NA	0.717	NA	2.9483453
1357	12	70949620	70949620	G	A	intronic	PTPRB	NA	NA	NA	intronic	ENSG00000127329	NA	NA	NA	NA	NA	12q15	NA	NA	NA	NA	rs2278341	0.31	0.31	0.326	0.309704	0.3449	0.1905	0.2176	0.4017	0.3374	0.35	0.21	0.23	0.41	0.3476	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.180778	NA	NA	0.359559	0.387519	NA	0.275	NA	2.947941
1357	8	144894496	144894496	G	A	exonic	SCRIB	NA	synonymous SNV	SCRIB:NM_015356:exon9:c.C846T:p.T282T,SCRIB:NM_182706:exon9:c.C846T:p.T282T	exonic	ENSG00000180900	NA	synonymous SNV	ENSG00000180900:ENST00000320476:exon9:c.C846T:p.T282T,ENSG00000180900:ENST00000356994:exon9:c.C846T:p.T282T,ENSG00000180900:ENST00000377533:exon9:c.C603T:p.T201T	NA	NA	8q24.3	NA	NA	NA	NA	rs4875060	0.9	0.9	0.886	0.904553	0.8976	0.9752	0.9251	0.7988	0.9673	0.9	0.98	0.89	0.82	0.9135	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.277521	NA	NA	0.907791	0.815025	NA	0.906	NA	2.9477756
1357	14	100158241	100158241	C	T	intronic	CYP46A1	NA	NA	NA	ncRNA_intronic	ENSG00000258672	NA	NA	NA	NA	NA	14q32.2	NA	NA	NA	NA	rs4900442	0.44	0.44	0.427	0.440296	0.4622	0.4911	0.5072	0.2995	0.5082	0.46	0.51	0.49	0.31	0.4713	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.226976	NA	NA	0.452791	0.329551	NA	0.435	NA	2.9470423
1357	1	186022032	186022032	T	G	intronic	HMCN1	NA	NA	NA	intronic	ENSG00000143341	NA	NA	NA	NA	NA	1q31.1	NA	NA	NA	NA	rs10911808	0.67	0.67	0.672	0.67472	0.5249	0.5933	0.6657	0.9546	0.5409	0.54	0.62	0.66	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.504404	NA	NA	0.528629	0.884132	NA	0.674	NA	2.946471
1357	11	95562327	95562327	G	A	intronic	CEP57	NA	NA	NA	intronic	ENSG00000166037	NA	NA	NA	NA	NA	11q21	NA	NA	NA	NA	rs534488	0.27	0.27	0.268	0.204872	0.3738	0.253	0.2363	0.0734	0.137	0.37	0.28	0.28	0.09	0.297	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.751596	NA	NA	0.382736	0.120627	NA	0.246	NA	2.946464
1357	17	9764531	9764531	A	G	intronic	GLP2R	NA	NA	NA	intronic	ENSG00000065325	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs2001486	0.43	0.43	0.432	0.455671	0.3429	0.2897	0.4294	0.7466	0.3681	0.34	0.28	0.42	0.76	0.372	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.107292	NA	NA	0.338721	0.669542	NA	0.507	NA	2.946379
1357	5	78265041	78265041	A	G	intronic	ARSB	NA	NA	NA	intronic	ENSG00000113273	NA	NA	NA	NA	NA	5q14.1	NA	NA	NA	NA	rs3733895	0.27	0.27	0.245	0.243011	0.3658	0.2232	0.3012	0.1293	0.2495	0.36	0.22	0.31	0.15	0.3203	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.234302	2.234302	NA	0.367907	0.164471	NA	0.304	NA	2.945993
1357	6	30893831	30893831	G	A	intronic	VARS2	NA	NA	NA	intronic	ENSG00000137411	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs2532938	0.24	0.24	0.224	0.222045	0.3559	0.247	0.2075	0.0983	0.2362	0.35	0.28	0.2	0.06	0.3214	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.225382	NA	NA	0.376707	0.146026	NA	0.283	NA	2.945993
1357	7	142045446	142045446	G	C	intergenic	LOC730441,MTRNR2L6	dist=73378;dist=328685	NA	NA	intronic	ENSG00000211745	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs56060483	NA	NA	0.255	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3315	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.126324	NA	NA	0.389472	0.269386	NA	0.232	NA	2.9456947
1357	2	228996650	228996650	A	G	intronic	SPHKAP	NA	NA	NA	intronic	ENSG00000153820	NA	NA	NA	NA	NA	2q36.3	NA	NA	NA	NA	rs4353646	0.39	0.39	0.345	0.367212	0.339	0.4901	0.5187	0.2867	0.271	0.33	0.47	0.49	0.3	0.36	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.376287	NA	NA	0.355465	0.297322	NA	0.362	NA	2.945535
1357	15	31745368	31745368	A	G	intergenic	KLF13,OTUD7A	dist=75266;dist=29961	NA	NA	downstream	ENSG00000259696	NA	NA	NA	NA	NA	15q13.3	NA	NA	NA	NA	rs6493668	0.73	0.73	0.719	0.730232	0.5547	0.8829	0.6974	0.8381	0.6309	0.56	0.88	0.71	0.82	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.352653	NA	NA	NA	NA	NA	0.775	NA	2.9453
1358	11	119004686	119004686	T	A	intronic	HINFP	NA	NA	NA	intronic	ENSG00000172273	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs658922	0.55	0.55	0.533	0.579872	0.5288	0.8998	0.3559	0.3472	0.7761	0.52	0.88	0.4	0.32	0.5262	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.094888	NA	NA	NA	NA	NA	0.536	NA	2.945
1358	8	145724275	145724275	T	C	intronic	PPP1R16A	NA	NA	NA	ncRNA_exonic	ENSG00000255182,ENSG00000261139	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs3816732	0.39	0.39	0.335	0.405551	0.4592	0.5387	0.5	0.09	0.5726	0.46	0.48	0.52	0.09	0.466	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.594427	NA	NA	0.463372	0.146004	NA	0.268	NA	2.9447613
1358	7	133979545	133979545	A	T	UTR3	SLC35B4	NM_032826:c.*40T>A	NA	NA	UTR3	ENSG00000205060	ENST00000378509:c.*40T>A,ENST00000416907:c.*587T>A	NA	NA	NA	NA	7q33	NA	NA	NA	NA	rs2504	0.44	0.44	0.425	0.472444	0.4642	0.2708	0.5749	0.5219	0.5491	0.48	0.27	0.55	0.52	0.4644	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.289313	1.289313	NA	0.460116	0.523377	NA	0.406	NA	2.9446174
1358	7	133979552	133979552	C	T	UTR3	SLC35B4	NM_032826:c.*33G>A	NA	NA	UTR3	ENSG00000205060	ENST00000378509:c.*33G>A,ENST00000416907:c.*580G>A	NA	NA	NA	NA	7q33	NA	NA	NA	NA	rs2505	0.44	0.44	0.418	0.472444	0.4642	0.2708	0.5749	0.5219	0.5491	0.48	0.27	0.55	0.52	0.4644	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.502908	NA	NA	0.460116	0.523604	NA	0.406	NA	2.9446174
1358	6	30890055	30890055	T	C	intronic	VARS2	NA	NA	NA	intronic	ENSG00000137411	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs2517466	0.24	0.24	0.23	0.222045	0.3559	0.247	0.2075	0.0983	0.2362	0.35	0.28	0.2	0.06	0.3225	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.33249	1.33249	NA	0.377031	0.146026	NA	0.283	NA	2.944569
1358	9	127089775	127089775	A	G	intronic	NEK6	NA	NA	NA	intronic	ENSG00000119408	NA	NA	NA	NA	NA	9q33.3	NA	NA	NA	NA	rs748741	0.3	0.3	0.27	0.305711	0.3419	0.1925	0.3127	0.3313	0.3456	0.34	0.19	0.34	0.33	0.3408	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.596103	NA	NA	0.372761	0.337494	NA	0.188	NA	2.944539
1358	5	171569	171569	T	C	intronic	PLEKHG4B	NA	NA	NA	intronic	ENSG00000153404	NA	NA	NA	NA	NA	5p15.33	NA	NA	Name=6	NA	rs4956981	0.53	0.53	0.542	0.551717	0.675	0.2827	0.5447	0.6104	0.6278	0.67	0.28	0.58	0.58	0.6665	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.361238	NA	NA	0.714019	0.648199	NA	0.623	NA	2.944481
1358	16	28855522	28855522	G	C	intronic	TUFM	NA	NA	NA	intronic	ENSG00000178952	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs61737565	0.27	0.27	0.236	0.261581	0.329	0.126	0.487	0.2277	0.2178	0.34	0.13	0.41	0.21	0.3453	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.137777	NA	NA	0.381512	0.271279	NA	0.159	NA	2.944188
1358	4	55968053	55968053	A	C	intronic	KDR	NA	NA	NA	intronic	ENSG00000128052	NA	NA	NA	NA	NA	4q12	NA	NA	NA	NA	rs7655964	0.33	0.33	0.264	0.292931	0.3628	0.3135	0.4957	0.1082	0.3057	0.37	0.34	0.52	0.13	0.3475	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.390578	NA	NA	0.345581	0.159555	NA	0.319	NA	2.944119
1358	20	44645010	44645010	C	T	UTR3	MMP9	NM_004994:c.*3C>T	NA	NA	ncRNA_UTR3	ENSG00000100985	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs20544	0.28	0.28	0.277	0.259385	0.5417	0.001	0.3372	0.1929	0.2699	0.53	0.0017	0.36	0.16	0.4329	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.938714	NA	NA	0.581395	0.261689	NA	0.442	NA	2.944005
1358	3	111958679	111958679	T	C	intronic	SLC9C1	NA	NA	NA	intronic	ENSG00000172139	NA	NA	NA	NA	NA	3q13.2	NA	NA	NA	NA	rs13065023	0.33	0.33	0.328	0.313898	0.3588	0.4345	0.3084	0.1399	0.3824	0.36	0.47	0.29	0.15	0.3499	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.064247	NA	NA	0.347442	0.164623	NA	0.319	NA	2.943858
1358	16	28855727	28855727	A	G	intronic	TUFM	NA	NA	NA	intronic	ENSG00000178952	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs4788099	0.27	0.27	0.241	0.261581	0.329	0.126	0.487	0.2277	0.2178	0.34	0.13	0.41	0.21	0.3454	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.446782	NA	NA	0.381744	0.271962	ID=COSN165169;OCCURENCE=1(breast)	0.159	NA	2.943856
1358	16	28890131	28890131	C	A	intronic	ATP2A1	NA	NA	NA	intronic	ENSG00000196296	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs62037371	0.27	0.27	0.244	0.261382	0.329	0.126	0.4856	0.2277	0.2178	0.34	0.13	0.4	0.21	0.3454	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.058996	NA	NA	0.381744	0.270369	NA	0.159	NA	2.943856
1358	17	80884247	80884247	T	C	intronic	TBCD	NA	NA	NA	intronic	ENSG00000141556	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs1078334	0.42	0.42	0.408	0.424521	0.3519	0.5268	0.3357	0.525	0.3211	0.34	0.47	0.37	0.53	0.363	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.758953	NA	NA	0.34151	0.474082	NA	0.471	NA	2.94359
1358	7	142045518	142045518	G	A	intergenic	LOC730441,MTRNR2L6	dist=73450;dist=328613	NA	NA	intronic	ENSG00000211745	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs1960210	NA	NA	0.26	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3318	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.044711	NA	NA	0.391639	0.270305	NA	0.239	NA	2.9432277
1358	5	32248077	32248077	C	T	intronic	MTMR12	NA	NA	NA	intronic	ENSG00000150712	NA	NA	NA	NA	NA	5p13.3	NA	NA	NA	NA	rs11960898	0.36	0.36	0.366	0.351438	0.3549	0.4871	0.3357	0.239	0.3712	0.35	0.52	0.32	0.24	0.3645	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.392253	1.392253	NA	0.337791	0.268165	NA	0.362	NA	2.942809
1358	16	28617595	28617595	A	G	intronic	SULT1A1	NA	NA	NA	intronic	ENSG00000196502	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs4149393	0.27	0.27	0.21	0.290935	0.335	0.2649	0.4755	0.2284	0.226	0.33	0.2	0.36	0.2	0.3463	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.334539	NA	NA	0.37686	0.243286	NA	0.138	NA	2.94184
1358	16	57071232	57071232	C	G	intronic	NLRC5	NA	NA	NA	intronic	ENSG00000140853	NA	NA	NA	NA	NA	16q13	NA	NA	Name=9	NA	rs1684580	0.53	0.53	NA	0.489417	0.6978	0.3929	0.5735	0.3298	0.5307	0.7	0.42	0.61	0.36	0.6139	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.444501	NA	NA	0.746512	0.429936	NA	0.464	NA	2.941788
1358	11	4562831	4562831	A	G	intergenic	OR52K1,OR52M1	dist=51693;dist=3590	NA	NA	intergenic	ENSG00000226616,ENSG00000197790	dist=25677;dist=3590	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs2657172	0.35	0.35	0.36	0.346845	0.3917	0.2302	0.268	0.3858	0.4243	0.38	0.26	0.35	0.42	NA	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.092468	NA	NA	NA	NA	NA	0.297	NA	2.9416334
1358	3	172347134	172347134	G	A	intergenic	TNFSF10,NCEH1	dist=105837;dist=1301	NA	NA	downstream	ENSG00000144959	NA	NA	NA	NA	NA	3q26.31	NA	NA	NA	NA	rs234016	0.52	0.52	0.543	0.489617	0.5586	0.3998	0.4841	0.6233	0.3344	0.54	0.39	0.52	0.64	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.976944	NA	NA	NA	NA	NA	0.551	NA	2.9414
1358	4	109769844	109769844	C	T	intronic	COL25A1	NA	NA	NA	intronic	ENSG00000188517	NA	NA	NA	NA	NA	4q25	NA	NA	NA	NA	rs13130308	0.5	0.5	0.468	0.493011	0.5408	0.62	0.5793	0.1687	0.6902	0.54	0.66	0.59	0.18	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.7154	NA	NA	0.517913	0.236272	NA	0.464	NA	2.941287
1358	8	144654582	144654582	C	A	intronic	MROH6	NA	NA	NA	intronic	ENSG00000204839	NA	NA	NA	NA	NA	8q24.3	NA	NA	Name=5	NA	rs4874154	0.75	0.75	0.312	0.753195	0.7853	0.8661	0.7075	0.6399	0.7894	0.78	0.85	0.69	0.64	0.8226	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.520531	1.520531	NA	0.451187	0.316149	NA	0.754	NA	2.940913
1358	13	114751040	114751040	G	A	intronic	RASA3	NA	NA	NA	intronic	ENSG00000185989	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs71449038	0.29	0.29	0.27	0.273363	0.3529	0.3413	0.3415	0.0817	0.3323	0.36	0.33	0.34	0.1	0.3398	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.640677	NA	NA	0.366628	0.141171	NA	0.319	NA	2.940672
1358	16	28618237	28618237	T	C	intronic	SULT1A1	NA	NA	NA	intronic	ENSG00000196502	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs9282862	0.23	0.23	0.211	0.292532	0.335	0.2659	0.4769	0.2284	0.2321	0.26	0.2	0.32	0.15	0.3591	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.052478	NA	NA	0.365349	0.228493	NA	NA	NA	2.940551
1358	15	50254280	50254280	T	C	intronic	ATP8B4	NA	NA	NA	intronic	ENSG00000104043	NA	NA	NA	NA	NA	15q21.2	NA	NA	NA	NA	rs12442430	0.4	0.4	0.388	0.336861	0.5288	0.3413	0.4049	0.1445	0.3466	0.57	0.35	0.44	0.16	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.300809	1.300809	NA	0.531131	0.211679	NA	0.478	NA	2.940069
1358	7	133979578	133979578	A	G	UTR3	SLC35B4	NM_032826:c.*7T>C	NA	NA	UTR3	ENSG00000205060	ENST00000378509:c.*7T>C,ENST00000416907:c.*554T>C	NA	NA	NA	NA	7q33	NA	NA	NA	NA	rs2241336	0.44	0.44	0.425	0.472045	0.4642	0.2708	0.5749	0.5219	0.547	0.48	0.27	0.55	0.52	0.4688	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.491736	1.491736	NA	0.460349	0.523604	NA	0.406	NA	2.9399844
1358	18	33725874	33725874	T	G	intronic	ELP2	NA	NA	NA	intronic	ENSG00000134759	NA	NA	NA	NA	NA	18q12.2	NA	NA	NA	NA	rs1789546	0.29	0.29	0.254	0.245208	0.3757	0.1756	0.3674	0.1641	0.2055	0.39	0.18	0.41	0.17	0.3184	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.758688	1.758688	NA	0.366047	0.204721	NA	0.254	NA	2.939853
1358	4	58969622	58969622	A	C	intergenic	LOC255130,NONE	dist=898157;dist=NONE	NA	NA	downstream	ENSG00000248660	NA	NA	NA	NA	NA	4q12	NA	NA	NA	NA	rs2610175	0.52	0.52	0.49	0.511581	0.5606	0.4891	0.6239	0.469	0.4622	0.55	0.5	0.58	0.45	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.723207	NA	NA	NA	NA	NA	0.486	NA	2.9394
1358	8	59484899	59484899	T	A	intronic	SDCBP	NA	NA	NA	intronic	ENSG00000137575	NA	NA	NA	NA	NA	8q12.1	NA	NA	NA	NA	rs7827910	0.43	0.43	0.424	0.452676	0.3728	0.6022	0.2392	0.5287	0.4294	0.35	0.57	0.28	0.5	0.3607	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.069417	NA	NA	0.327209	0.495461	NA	0.37	NA	2.939291
1358	1	10327407	10327407	A	T	intronic	KIF1B	NA	NA	NA	intronic	ENSG00000054523	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs12141246	0.4	0.4	0.372	0.380591	0.3608	0.3919	0.4006	0.4486	0.2832	0.36	0.38	0.42	0.45	0.3501	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.273433	NA	NA	0.349884	0.409442	NA	0.355	NA	2.939216
1358	2	136960483	136960483	C	T	intergenic	CXCR4,THSD7B	dist=84758;dist=787979	NA	NA	intergenic	ENSG00000227347,ENSG00000230037	dist=2410;dist=126528	NA	NA	NA	NA	2q22.1	NA	NA	NA	NA	rs11688302	0.48	0.48	0.484	0.464856	0.3956	0.6577	0.4308	0.354	0.5112	0.37	0.72	0.46	0.39	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.95099	NA	NA	NA	NA	NA	0.449	NA	2.9377334
1358	12	9353875	9353875	T	C	intronic	PZP	NA	NA	NA	intronic	ENSG00000126838	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs3759274	0.34	0.34	0.358	0.348243	0.3549	0.4405	0.2695	0.3026	0.364	0.34	0.43	0.26	0.3	0.3525	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.166612	NA	NA	0.355563	0.30867	NA	0.283	NA	2.937037
1358	21	37623447	37623447	C	T	intronic	DOPEY2	NA	NA	NA	intronic	ENSG00000142197	NA	NA	NA	NA	NA	21q22.12	NA	NA	NA	NA	rs2298450	0.38	0.38	0.332	0.389577	0.3469	0.3472	0.3746	0.5681	0.2464	0.34	0.3	0.37	0.53	0.366	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.693803	NA	NA	0.350116	0.502953	NA	0.283	NA	2.936984
1358	12	52712898	52712898	A	G	intronic	KRT83	NA	NA	NA	intronic	ENSG00000170523	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs2187512	0.33	0.33	0.343	0.349241	0.3628	0.1677	0.2493	0.5076	0.3793	0.36	0.16	0.29	0.52	0.3407	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.520257	NA	NA	0.360698	0.483886	ID=COSN164260;OCCURENCE=1(breast)	0.428	NA	2.935802
1358	19	50140068	50140068	C	T	intronic	RRAS	NA	NA	NA	intronic	ENSG00000126458	NA	NA	NA	NA	NA	19q13.33	NA	NA	Name=3	NA	rs1368464	0.77	0.77	0.744	0.738219	0.6978	0.8343	0.7954	0.7799	0.5838	0.7	0.86	0.75	0.78	0.7034	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.495649	NA	NA	0.663372	0.762143	NA	0.783	NA	2.935428
1358	5	141975067	141975067	A	C	intronic	FGF1	NA	NA	NA	ncRNA_intronic	ENSG00000231185	NA	NA	NA	NA	NA	5q31.3	NA	NA	NA	NA	rs34003	0.57	0.57	0.561	0.56889	0.4563	0.6121	0.3818	0.77	0.501	0.47	0.63	0.42	0.77	0.4951	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.891641	1.891641	NA	0.446744	0.711303	NA	0.645	NA	2.9351893
1358	8	92021036	92021036	C	T	intronic	TMEM55A	NA	NA	NA	intronic	ENSG00000155099	NA	NA	NA	NA	NA	8q21.3	NA	NA	Name=48	NA	rs2054805	0.51	0.51	0.501	0.526558	0.7087	0.2708	0.4798	0.4864	0.6902	0.71	0.27	0.51	0.49	0.6279	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.680684	1.680684	NA	0.728372	0.508171	NA	0.551	NA	2.935028
1359	14	35576458	35576458	A	C	intronic	PPP2R3C	NA	NA	NA	intronic	ENSG00000092020,ENSG00000151327	NA	NA	NA	NA	NA	14q13.2	NA	NA	NA	NA	rs10132769	0.45	0.45	0.454	0.416733	0.5487	0.4117	0.3775	0.3525	0.4008	0.54	0.42	0.46	0.34	NA	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.525464	NA	NA	0.516336	0.396684	NA	0.391	NA	2.934964
1359	19	899567	899567	C	G	intronic	R3HDM4	NA	NA	NA	intronic	ENSG00000198858	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs2930885	0.33	0.33	0.334	0.35004	0.3519	0.2887	0.4251	0.2761	0.4581	0.35	0.29	0.4	0.28	0.3638	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.031427	NA	NA	0.350012	0.298636	NA	0.312	NA	2.934288
1359	8	81892766	81892766	G	A	intronic	PAG1	NA	NA	NA	intronic	ENSG00000076641	NA	NA	NA	NA	NA	8q21.13	NA	NA	NA	NA	rs2241972	0.47	0.47	0.478	0.501797	0.3419	0.5317	0.3184	0.7337	0.4519	0.35	0.52	0.36	0.7	0.3915	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.612922	NA	NA	0.332674	0.64503	NA	0.355	NA	2.933926
1359	14	106110966	106110966	C	T	intergenic	TMEM121,ELK2AP	dist=114427;dist=24948	NA	NA	exonic	ENSG00000211893	NA	synonymous SNV	ENSG00000211893:ENST00000390545:exon1:c.G162A:p.P54P	NA	NA	14q32.33	NA	NA	NA	NA	rs11557955	0.46	0.46	0.48	0.436701	0.5358	0.3899	0.647	0.1362	0.6401	0.55	0.52	0.59	0.15	0.5166	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.398451	NA	NA	0.514168	0.2394	NA	0.014	NA	2.933432
1359	19	13868669	13868669	G	A	intronic	CCDC130	NA	NA	NA	intronic	ENSG00000104957	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs6511886	0.38	0.38	0.357	0.419529	0.328	0.6101	0.3401	0.3124	0.5184	0.32	0.55	0.34	0.31	0.3905	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.335583	NA	NA	0.348372	0.317295	NA	0.42	NA	2.933128
1359	2	96962859	96962859	A	G	intronic	SNRNP200	NA	NA	NA	intronic	ENSG00000144028	NA	NA	NA	NA	NA	2q11.2	NA	NA	NA	NA	rs17479466	0.3	0.3	0.312	0.389976	0.34	0.2817	0.3285	0.2859	0.7372	0.34	0.26	0.32	0.27	0.3724	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.454782	NA	NA	0.354535	0.296868	ID=COSN166203;OCCURENCE=1(NS)	0.232	NA	2.933065
1359	11	118959732	118959732	C	T	intronic	HMBS	NA	NA	NA	intronic	ENSG00000256269	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs549893	0.52	0.52	0.531	0.534944	0.5109	0.2837	0.6916	0.7375	0.4335	0.51	0.25	0.65	0.74	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.811918	NA	NA	0.556254	0.721821	NA	0.58	NA	2.932846
1359	7	148543525	148543525	A	G	intronic	EZH2	NA	NA	NA	intronic	ENSG00000106462	NA	NA	NA	NA	NA	7q36.1	NA	NA	Name=4	NA	rs10274535	0.76	0.76	0.775	0.770367	0.673	0.7014	0.7882	0.9796	0.6462	0.68	0.68	0.77	0.97	0.704	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.566237	1.566237	NA	0.690233	0.929414	NA	0.739	NA	2.932767
1359	14	106110057	106110057	G	A	intergenic	TMEM121,ELK2AP	dist=113518;dist=25857	NA	NA	exonic	ENSG00000211893	NA	synonymous SNV	ENSG00000211893:ENST00000390545:exon3:c.C561T:p.V187V	NA	NA	14q32.33	NA	NA	NA	NA	rs11160859	0.46	0.46	0.418	0.435104	0.5368	0.3869	0.6484	0.1316	0.6391	0.55	0.52	0.6	0.14	0.5138	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.318795	NA	NA	0.516737	0.233012	NA	0.348	NA	2.932663
1359	19	19613381	19613381	G	A	intronic	GATAD2A	NA	NA	NA	intronic	ENSG00000167491	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs892022	0.41	0.41	0.394	0.458466	0.3231	0.3006	0.4769	0.6437	0.4969	0.32	0.29	0.46	0.64	0.3967	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.015755	NA	NA	0.347582	0.612962	NA	0.478	NA	2.932618
1359	21	41142803	41142803	T	C	intronic	IGSF5	NA	NA	NA	intronic	ENSG00000183067	NA	NA	NA	NA	NA	21q22.2	NA	NA	NA	NA	rs2837199	0.27	0.27	0.243	0.254593	0.3479	0.2609	0.2104	0.1891	0.272	0.33	0.28	0.24	0.17	0.3256	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.725153	NA	NA	0.393953	0.205402	NA	0.217	NA	2.932547
1359	1	38345896	38345896	A	C	intronic	INPP5B	NA	NA	NA	intronic	ENSG00000204084	NA	NA	NA	NA	NA	1p34.3	NA	NA	Name=2	NA	rs2306427	0.57	0.57	0.538	0.522963	0.7247	0.4752	0.5951	0.2995	0.6155	0.74	0.51	0.59	0.34	0.641	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.367139	NA	NA	0.702135	0.373404	NA	0.471	NA	2.932165
1359	8	74893880	74893880	C	T	UTR3	TMEM70	NM_017866:c.*24C>T,NM_001040613:c.*497C>T	NA	NA	UTR3	ENSG00000175606	ENST00000312184:c.*24C>T	NA	NA	NA	NA	8q21.11	NA	NA	NA	NA	rs7108	0.46	0.46	0.443	0.47504	0.4553	0.3403	0.5951	0.5121	0.499	0.44	0.34	0.58	0.56	0.4946	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.321895	NA	NA	0.451288	0.492918	NA	0.449	NA	2.9321454
1359	12	75692607	75692607	G	A	intronic	CAPS2	NA	NA	NA	intronic	ENSG00000180881	NA	NA	NA	NA	NA	12q21.1	NA	NA	NA	NA	rs7485576	0.29	0.29	0.277	0.252196	0.3579	0.3859	0.2594	0.0272	0.3047	0.36	0.4	0.31	0.04	0.3295	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.409527	NA	NA	0.380465	0.093963	NA	0.181	NA	2.932135
1359	13	79209382	79209382	A	C	intronic	RNF219	NA	NA	NA	intronic	ENSG00000152193	NA	NA	NA	NA	NA	13q31.1	NA	NA	NA	NA	rs9805409	0.36	0.36	0.34	0.348243	0.3529	0.3333	0.268	0.4039	0.3405	0.38	0.33	0.28	0.41	0.3598	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.167756	NA	NA	0.355398	0.39941	NA	0.283	NA	2.931902
1359	9	88989830	88989830	T	C	intergenic	ZCCHC6,GAS1	dist=20428;dist=569447	NA	NA	downstream	ENSG00000214908	NA	NA	NA	NA	NA	9q21.33	NA	NA	NA	NA	rs10868419	0.46	0.46	0.471	0.433506	0.5686	0.4067	0.4697	0.2958	0.4826	0.59	0.46	0.42	0.29	NA	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.370927	NA	NA	NA	NA	NA	0.522	NA	2.9314
1359	14	65031572	65031572	A	G	intronic	PPP1R36	NA	NA	NA	ncRNA_intronic	ENSG00000259076	NA	NA	NA	NA	NA	14q23.3	NA	NA	NA	NA	rs4902293	0.49	0.49	0.458	0.46865	0.4463	0.6548	0.5476	0.261	0.5245	0.46	0.66	0.54	0.31	0.4915	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.912456	NA	NA	0.464884	0.281434	NA	0.464	NA	2.9306493
1359	9	33026638	33026638	G	A	intronic	DNAJA1	NA	NA	NA	intronic	ENSG00000086061	NA	NA	NA	NA	NA	9p21.1	NA	NA	NA	NA	rs2274769	0.32	0.32	0.305	0.267372	0.3787	0.1647	0.2997	0.3381	0.1401	0.38	0.2	0.33	0.35	0.3139	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.711868	NA	NA	0.37686	0.326373	NA	0.391	NA	2.93054
1359	X	1713168	1713168	C	T	intronic	AKAP17A	NA	NA	NA	intronic	ENSG00000197976	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs5989832	0.56	0.56	NA	NA	NA	NA	NA	NA	NA	0.58	0.54	0.51	0.58	0.5387	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.396958	NA	NA	0.531206	0.551998	NA	0.645	NA	2.930094
1359	22	32579550	32579550	T	C	intergenic	C22orf42,RFPL2	dist=24307;dist=6872	NA	NA	intergenic	ENSG00000230120,ENSG00000128253	dist=23171;dist=6872	NA	NA	Score=397;Name=lod=55	NA	22q12.3	NA	NA	NA	NA	rs136428	0.44	0.44	0.441	0.45607	0.493	0.1369	0.3775	0.7995	0.3384	0.49	0.13	0.38	0.77	0.4352	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.067954	NA	NA	0.475389	0.750571	NA	0.529	NA	2.9297444
1359	19	57654065	57654065	T	C	intronic	ZIM3	NA	NA	NA	intronic	ENSG00000141946	NA	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs58537382	0.39	0.39	0.352	0.384585	0.5239	0.376	0.451	0.1248	0.5542	0.52	0.38	0.48	0.14	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.512634	NA	NA	0.546826	0.179913	NA	0.239	NA	2.929274
1359	3	193081866	193081866	T	A	intronic	ATP13A5	NA	NA	NA	intronic	ENSG00000187527	NA	NA	NA	NA	NA	3q29	Score=824;Name=V$BRN2_01	NA	NA	NA	rs4386441	0.71	0.71	0.719	0.663738	0.7087	0.7401	0.6859	0.6036	0.6043	0.71	0.76	0.7	0.64	0.6777	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.459292	NA	NA	0.684419	0.593509	NA	0.71	NA	2.929181
1359	22	32579559	32579559	A	G	intergenic	C22orf42,RFPL2	dist=24316;dist=6863	NA	NA	intergenic	ENSG00000230120,ENSG00000128253	dist=23180;dist=6863	NA	NA	Score=397;Name=lod=55	NA	22q12.3	NA	NA	NA	NA	rs136429	0.44	0.44	0.438	0.45627	0.494	0.1369	0.3775	0.7995	0.3384	0.49	0.13	0.38	0.77	0.4352	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.27463	NA	NA	0.475389	0.750571	NA	0.529	NA	2.9287444
1359	11	71260243	71260243	T	C	UTR3	KRTAP5-9	NM_005553:c.*30T>C	NA	NA	UTR3	ENSG00000254997	ENST00000528743:c.*30T>C	NA	NA	NA	NA	11q13.4	NA	NA	NA	NA	rs2664	0.58	0.58	0.546	0.526158	0.4692	0.623	0.5908	0.6301	0.2986	0.49	0.68	0.6	0.59	0.4885	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.07487	NA	NA	0.44724	0.601683	NA	0.493	NA	2.9283934
1359	3	47277885	47277885	G	A	ncRNA_intronic	KIF9-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000227398	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs13094438	0.5	0.5	0.477	0.479433	0.5994	0.5357	0.5245	0.2368	0.5941	0.6	0.53	0.54	0.29	0.5538	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.449814	NA	NA	0.58593	0.289832	NA	0.529	NA	2.9275366
1359	11	134240142	134240142	T	C	intronic	GLB1L2	NA	NA	NA	intronic	ENSG00000149328	NA	NA	NA	NA	NA	11q25	NA	NA	NA	NA	rs10791358	0.31	0.31	0.268	0.308307	0.3549	0.4206	0.4856	0.0507	0.3671	0.32	0.42	0.46	0.06	0.3571	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.431968	NA	NA	0.361648	0.10995	NA	0.217	NA	2.926352
1359	9	130168326	130168326	C	T	intronic	SLC2A8	NA	NA	NA	intronic	ENSG00000136856	NA	NA	NA	NA	NA	9q33.3	NA	NA	NA	NA	rs10987637	0.28	0.28	0.272	0.277756	0.3867	0.1567	0.2334	0.2625	0.3425	0.38	0.12	0.26	0.32	0.3208	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.429127	NA	NA	0.366399	0.285959	NA	0.21	NA	2.926101
1359	18	55364830	55364830	G	A	intronic	ATP8B1	NA	NA	NA	ncRNA_intronic	ENSG00000267040,ENSG00000267787	NA	NA	NA	NA	NA	18q21.31	NA	NA	NA	NA	rs319439	0.49	0.49	0.452	0.442093	0.4493	0.6706	0.572	0.2481	0.3691	0.44	0.68	0.59	0.3	0.4763	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.546657	NA	NA	0.481977	0.274852	NA	0.449	NA	2.9257563
1359	19	19646272	19646272	T	C	intronic	YJEFN3	NA	NA	NA	intronic	ENSG00000250067,ENSG00000258674	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs2304098	0.42	0.42	0.415	0.473642	0.3221	0.3214	0.4784	0.6551	0.5378	0.31	0.31	0.46	0.66	0.4053	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.784984	NA	NA	0.347307	0.622426	NA	0.464	NA	2.925293
1359	2	96943473	96943473	T	C	intronic	SNRNP200	NA	NA	NA	intronic	ENSG00000144028	NA	NA	NA	NA	NA	2q11.2	NA	NA	NA	NA	rs3214063	0.3	0.3	0.319	0.389377	0.341	0.2798	0.3271	0.2852	0.7372	0.34	0.26	0.32	0.27	0.3739	0.36	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.403627	NA	NA	0.36	0.296187	ID=COSN166202;OCCURENCE=1(NS)	0.232	NA	2.9251
1359	9	27284708	27284708	T	A	UTR3	EQTN	NM_020641:c.*13A>T,NM_001161585:c.*13A>T	NA	NA	UTR3	ENSG00000120160	ENST00000537675:c.*13A>T,ENST00000380032:c.*13A>T	NA	NA	NA	NA	9p21.2	NA	NA	NA	NA	rs1057524	0.37	0.37	0.352	0.347045	0.501	0.4732	0.2767	0.0915	0.454	0.5	0.46	0.32	0.12	0.434	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.258091	NA	NA	0.473256	0.139128	ID=COSN168495;OCCURENCE=1(large_intestine)	0.29	NA	2.9250774
1359	2	9554280	9554280	A	T	intronic	ITGB1BP1	NA	NA	NA	intronic	ENSG00000119185	NA	NA	NA	NA	NA	2p25.1	NA	NA	NA	NA	rs12474647	0.19	0.19	0.179	0.196286	0.3797	0.0367	0.2104	0.0764	0.3241	0.37	0.02	0.22	0.07	0.3049	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.356729	NA	NA	0.390349	0.131412	NA	0.159	NA	2.925051
1360	4	146086269	146086269	C	T	intronic	OTUD4	NA	NA	NA	intronic	ENSG00000164164	NA	NA	NA	NA	NA	4q31.21	NA	NA	NA	NA	rs17726651	0.23	0.23	0.202	0.204073	0.3867	0.1429	0.3112	0.0182	0.2546	0.39	0.18	0.29	0.02	0.3203	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.276391	NA	NA	0.368041	0.07224	NA	0.225	NA	2.924959
1360	7	40959287	40959287	T	G	intergenic	C7orf10,INHBA	dist=58921;dist=769314	NA	NA	intergenic	ENSG00000175600,ENSG00000232458	dist=58925;dist=44979	NA	NA	NA	NA	7p14.1	NA	NA	NA	NA	rs13233232	0.27	0.27	0.212	0.220248	0.4085	0.1815	0.4683	0.0182	0.1636	0.39	0.19	0.45	0.03	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.676312	1.676312	NA	NA	NA	NA	0.254	NA	2.9248334
1360	9	137708803	137708803	A	G	intronic	COL5A1	NA	NA	NA	intronic	ENSG00000130635	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs3811149	0.58	0.58	0.592	0.592252	0.5109	0.4921	0.5086	0.8676	0.4663	0.52	0.48	0.5	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.421849	NA	NA	0.564425	0.828757	ID=COSN168703;OCCURENCE=2(large_intestine)	0.688	NA	2.924675
1360	7	47943953	47943953	C	T	intronic	PKD1L1	NA	NA	NA	intronic	ENSG00000136273,ENSG00000158683	NA	NA	NA	NA	NA	7p12.3	NA	NA	NA	NA	rs11766212	0.31	0.31	0.269	0.274161	0.3728	0.4425	0.4063	0.0393	0.2229	0.38	0.41	0.38	0.05	0.3431	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.679311	NA	NA	0.359535	0.108715	NA	0.406	NA	2.924565
1360	11	9652916	9652916	A	T	intergenic	WEE1,SWAP70	dist=41603;dist=32712	NA	NA	upstream	ENSG00000255463	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs6483579	0.41	0.41	0.028	0.367612	0.5755	0.3611	0.3948	0.1097	0.4898	0.65	0.36	0.44	0.1	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.476033	NA	NA	NA	NA	NA	NA	NA	2.9245
1360	11	9652917	9652917	T	C	intergenic	WEE1,SWAP70	dist=41604;dist=32711	NA	NA	upstream	ENSG00000255463	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs6483580	0.41	0.41	NA	0.367612	0.5755	0.3611	0.3948	0.1097	0.4898	0.65	0.36	0.43	0.1	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.564066	NA	NA	NA	NA	NA	NA	NA	2.9245
1360	4	120079159	120079159	A	G	intronic	MYOZ2	NA	NA	NA	intronic	ENSG00000172399	NA	NA	NA	NA	NA	4q26	NA	NA	NA	NA	rs11721566	0.57	0.57	0.54	0.546326	0.7008	0.628	0.6657	0.2458	0.6247	0.72	0.61	0.64	0.26	0.6494	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.50259	NA	NA	0.725698	0.323196	NA	0.565	CLINSIG=non-pathogenic;CLNDBN=not_provided;CLNREVSTAT=single;CLNACC=RCV000024480.2;CLNDSDB=.;CLNDSDBID=.	2.924102
1360	9	96425777	96425777	C	T	intronic	PHF2	NA	NA	NA	intronic	ENSG00000197724	NA	NA	NA	NA	NA	9q22.31	NA	NA	NA	NA	rs7036592	0.33	0.33	0.335	0.269768	0.3678	0.2917	0.2867	0.2769	0.1247	0.37	0.3	0.29	0.3	0.3272	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.271373	NA	NA	0.381628	0.282115	NA	0.37	NA	2.923372
1360	17	7011129	7011129	C	T	intronic	ASGR2	NA	NA	NA	intronic	ENSG00000161944	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs530779	0.34	0.34	0.3	0.352236	0.3489	0.4405	0.4841	0.1596	0.4315	0.34	0.44	0.44	0.13	0.3744	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.388829	NA	NA	0.353372	0.18089	NA	0.29	NA	2.923328
1360	1	204210791	204210791	G	A	intronic	PLEKHA6	NA	NA	NA	intronic	ENSG00000143850	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs4951325	0.36	0.36	0.331	0.327875	0.328	0.4762	0.4467	0.1853	0.2832	0.33	0.48	0.44	0.2	0.3831	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.35832	2.35832	NA	0.366047	0.240581	NA	0.304	NA	2.922853
1360	3	145820684	145820684	G	A	intronic	PLOD2	NA	NA	NA	ncRNA_intronic	ENSG00000243415	NA	NA	NA	NA	NA	3q24	NA	NA	NA	NA	rs3762691	0.49	0.49	0.498	0.480431	0.4652	0.5734	0.4597	0.4879	0.4049	0.46	0.56	0.46	0.48	0.4881	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.675086	NA	NA	0.457199	0.504548	NA	0.428	NA	2.9228343
1360	12	108203446	108203446	G	A	intergenic	ASCL4,LOC728739	dist=33025;dist=93481	NA	NA	intergenic	ENSG00000263632,ENSG00000257141	dist=9949;dist=23189	NA	NA	NA	NA	12q23.3	NA	NA	NA	NA	rs2374723	0.33	0.33	0.304	0.300919	0.4105	0.4425	0.4121	0.0197	0.3436	0.42	0.43	0.38	0.04	NA	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.799558	NA	NA	NA	NA	NA	0.384	NA	2.9228334
1360	7	813867	813867	C	G	intronic	HEATR2	NA	NA	NA	intronic	ENSG00000164818	NA	NA	NA	NA	NA	7p22.3	NA	Name=GABP	NA	NA	rs6973746	0.65	0.65	0.666	0.651757	0.6938	0.5198	0.5879	0.7617	0.6411	0.68	0.52	0.57	0.78	0.668	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.748461	NA	NA	0.715419	0.718278	NA	0.333	NA	2.922781
1360	3	137958438	137958438	C	T	intronic	ARMC8	NA	NA	NA	intronic	ENSG00000114098	NA	NA	NA	NA	NA	3q22.3	NA	NA	NA	NA	rs6778511	0.66	0.66	0.64	0.658147	0.5308	0.7837	0.7046	0.7065	0.5613	0.52	0.8	0.64	0.72	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.890647	NA	NA	0.546935	0.676301	NA	0.558	NA	2.922265
1360	19	52148804	52148804	A	C	intronic	SIGLEC14	NA	NA	NA	intronic	ENSG00000105501,ENSG00000254415,ENSG00000268500	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs885266	0.39	0.39	0.399	0.440495	0.341	0.4335	0.3963	0.4962	0.5061	0.34	0.34	0.37	0.53	0.3752	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.223625	NA	NA	0.361946	0.414745	NA	0.391	NA	2.921854
1360	9	21816646	21816646	A	G	intronic	MTAP	NA	NA	NA	intronic	ENSG00000099810,ENSG00000264545	NA	NA	NA	NA	NA	9p21.3	NA	NA	NA	NA	rs7023474	0.66	0.66	0.642	0.641374	0.5298	0.6994	0.67	0.8442	0.4018	0.53	0.67	0.62	0.86	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.399861	NA	NA	0.548712	0.815029	NA	0.725	NA	2.921488
1360	1	176734756	176734756	C	T	intronic	PAPPA2	NA	NA	NA	intronic	ENSG00000116183	NA	NA	NA	NA	NA	1q25.2	NA	NA	NA	NA	rs3737759	0.31	0.31	0.339	0.33746	0.3907	0.0556	0.2406	0.525	0.3885	0.38	0.06	0.3	0.51	0.3351	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.561085	NA	NA	0.352899	0.493285	NA	0.449	NA	2.921301
1360	2	89196906	89196906	A	C	intergenic	MIR4436A,NONE	dist=84938;dist=NONE	NA	NA	intronic	ENSG00000211599	NA	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs4588191	0.33	0.33	0.302	0.332268	0.2207	0.502	0.3285	0.23	0.4131	0.22	0.59	0.3	0.22	0.2854	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.17833	NA	NA	0.239839	0.223214	NA	0.159	NA	2.9207277
1360	11	48238302	48238302	G	T	upstream	OR4B1	NA	NA	NA	upstream	ENSG00000175619	NA	NA	NA	NA	NA	11p11.2	NA	NA	NA	NA	rs1566737	0.67	0.67	0.633	0.607228	0.7475	0.5526	0.7421	0.553	0.4969	0.75	0.61	0.74	0.54	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.694329	NA	NA	NA	NA	NA	0.623	NA	2.9191666
1360	6	165713998	165713998	C	T	intronic	C6orf118	NA	NA	NA	intronic	ENSG00000112539	NA	NA	NA	NA	NA	6q27	NA	NA	NA	NA	rs573814	0.38	0.38	0.399	0.383387	0.3738	0.2024	0.3963	0.4705	0.453	0.39	0.24	0.4	0.51	0.3636	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.512556	NA	NA	0.343488	0.417839	NA	0.384	NA	2.919112
1360	11	6890939	6890939	C	T	upstream	OR10A2	NA	NA	NA	UTR5	ENSG00000170790	ENST00000307322:c.-47C>T	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs4758141	0.31	0.31	0.305	0.324281	0.3569	0.3135	0.3732	0.2073	0.4254	0.36	0.31	0.35	0.2	0.3516	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.158012	NA	NA	0.372439	0.2	NA	0.268	NA	2.919061
1360	11	64137875	64137875	T	C	intronic	RPS6KA4	NA	NA	NA	intronic	ENSG00000162302	NA	NA	NA	NA	NA	11q13.1	NA	NA	NA	NA	rs11606081	0.27	0.27	0.249	0.252796	0.3708	0.2123	0.3818	0.0514	0.3538	0.39	0.22	0.35	0.06	0.3447	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.57644	NA	NA	0.365573	0.108814	NA	0.239	NA	2.918927
1360	4	88356111	88356111	T	C	intronic	NUDT9	NA	NA	NA	intronic	ENSG00000170502	NA	NA	NA	NA	NA	4q22.1	NA	NA	NA	NA	rs28736552	0.26	0.26	0.238	0.247204	0.3638	0.1052	0.3732	0.1906	0.2607	0.39	0.11	0.34	0.17	0.3372	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.463147	1.463147	NA	0.380265	0.195593	NA	0.188	NA	2.918735
1360	9	79164197	79164197	G	A	intergenic	GCNT1,PRUNE2	dist=41865;dist=62095	NA	NA	downstream	ENSG00000219149	NA	NA	NA	NA	NA	9q21.13	NA	NA	NA	NA	rs509308	0.62	0.62	0.578	0.609026	0.5815	0.6181	0.7133	0.5983	0.5685	0.6	0.65	0.71	0.54	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.030441	NA	NA	NA	NA	NA	0.58	NA	2.9185
1360	11	62799940	62799940	G	A	intergenic	SLC22A8,SLC22A24	dist=16623;dist=47472	NA	NA	downstream	ENSG00000256041	NA	NA	NA	NA	NA	11q12.3	NA	NA	NA	NA	rs7935838	0.51	0.51	0.532	0.505591	0.5815	0.4137	0.562	0.4834	0.5123	0.57	0.46	0.52	0.47	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.816986	NA	NA	NA	NA	NA	0.558	NA	2.9185
1360	7	73101137	73101137	A	G	intronic	WBSCR22	NA	NA	NA	intronic	ENSG00000071462	NA	NA	NA	NA	NA	7q11.23	NA	NA	NA	NA	rs11769825	0.26	0.26	0.219	0.257388	0.3698	0.1756	0.3674	0.0764	0.3926	0.37	0.18	0.39	0.09	0.3342	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.709311	NA	NA	0.377558	0.121425	NA	0.239	NA	2.918442
1360	15	34634324	34634324	C	G	intronic	NOP10	NA	NA	NA	intronic	ENSG00000182117	NA	NA	NA	NA	NA	15q14	NA	NA	NA	NA	rs422388	0.44	0.44	0.448	0.452875	0.3509	0.3512	0.3343	0.7148	0.3926	0.36	0.36	0.36	0.7	0.3681	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.425538	NA	NA	0.362611	0.649932	ID=COSN164890;OCCURENCE=1(breast)	0.326	NA	2.918389
1360	8	10689142	10689142	G	T	intronic	PINX1	NA	NA	NA	intronic	ENSG00000171056,ENSG00000254093,ENSG00000258724	NA	NA	NA	NA	NA	8p23.1	NA	NA	NA	NA	rs7004998	0.39	0.39	0.404	0.405551	0.3459	0.2202	0.2767	0.7254	0.317	0.35	0.2	0.31	0.71	0.4154	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.605561	NA	NA	0.320422	0.631435	NA	0.457	NA	2.918278
1360	9	137775139	137775139	A	G	intronic	FCN2	NA	NA	NA	intronic	ENSG00000160339	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs3128624	0.36	0.36	0.339	0.376997	0.3718	0.4177	0.2997	0.3222	0.4693	0.37	0.42	0.29	0.33	0.3638	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.474917	NA	NA	0.346512	0.341807	NA	0.261	NA	2.917888
1360	7	138305782	138305782	T	C	intronic	SVOPL	NA	NA	NA	intronic	ENSG00000157703	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs3734945	0.35	0.35	0.305	0.332268	0.3479	0.3948	0.4179	0.2458	0.3078	0.36	0.4	0.39	0.26	0.3622	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.590568	NA	NA	0.372093	0.269859	NA	0.246	NA	2.917807
1360	18	10540432	10540432	A	C	intronic	NAPG	NA	NA	NA	intronic	ENSG00000134265	NA	NA	NA	NA	NA	18p11.22	NA	NA	NA	NA	rs510110	0.39	0.39	0.409	0.363019	0.3936	0.4315	0.3343	0.3495	0.2996	0.39	0.46	0.35	0.35	0.3434	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.501379	1.501379	NA	0.34653	0.333423	NA	0.355	NA	2.91647
1360	19	57654104	57654104	T	C	intronic	ZIM3	NA	NA	NA	intronic	ENSG00000141946	NA	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs59976893	0.39	0.39	0.359	0.386382	0.5298	0.376	0.4553	0.1248	0.5542	0.52	0.38	0.49	0.14	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.244389	NA	NA	0.554054	0.179913	NA	0.239	NA	2.916146
1360	17	16229232	16229232	A	G	UTR3	PIGL	NM_004278:c.*20A>G	NA	NA	UTR3	ENSG00000108474	ENST00000225609:c.*20A>G,ENST00000395844:c.*12A>G,ENST00000596678:c.*12A>G	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs15739	0.31	0.31	0.26	0.267372	0.496	0.12	0.4294	0.112	0.2791	0.49	0.12	0.47	0.12	0.414	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.610398	4.610398	NA	0.507674	0.172946	ID=COSN165346;OCCURENCE=1(breast)	0.283	NA	2.9156594
1360	15	100695347	100695347	T	C	intronic	ADAMTS17	NA	NA	NA	intronic	ENSG00000140470	NA	NA	NA	NA	NA	15q26.3	NA	NA	NA	NA	rs8024690	0.36	0.36	0.351	0.38139	0.3628	0.246	0.3444	0.4849	0.4264	0.35	0.23	0.38	0.49	0.3632	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.115109	NA	NA	0.358488	0.467544	NA	0.333	NA	2.915512
1360	12	42859961	42859961	A	G	intronic	PRICKLE1	NA	NA	NA	intronic	ENSG00000139174	NA	NA	NA	NA	NA	12q12	NA	NA	NA	NA	rs12230583	0.3	0.3	0.265	0.269768	0.3638	0.2004	0.3588	0.2269	0.2393	0.37	0.23	0.41	0.22	0.3447	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.079965	NA	NA	0.376163	0.243532	ID=COSN164222;OCCURENCE=1(breast)	0.283	NA	2.915337
1361	19	55699575	55699575	T	C	intronic	PTPRH	NA	NA	NA	intronic	ENSG00000080031	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs3803905	0.43	0.43	0.453	0.485024	0.331	0.4048	0.5216	0.618	0.5204	0.32	0.42	0.46	0.61	0.4175	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.263782	NA	NA	0.336512	0.592828	NA	0.413	NA	2.914988
1361	8	38851204	38851204	A	C	intronic	TM2D2	NA	NA	NA	intronic	ENSG00000169490	NA	NA	NA	NA	NA	8p11.22	NA	NA	NA	NA	rs28626007	0.28	0.28	0.267	0.278554	0.3688	0.1984	0.3256	0.1989	0.3425	0.36	0.21	0.34	0.19	0.3475	0.37	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5.023233	5.023233	NA	0.368953	0.222651	NA	0.268	NA	2.914747
1361	2	127821499	127821499	T	C	intronic	BIN1	NA	NA	NA	intronic	ENSG00000136717	NA	NA	NA	NA	NA	2q14.3	NA	NA	NA	NA	rs72481904	0.33	0.33	0.252	0.345248	0.3658	0.3879	0.3991	0.1543	0.5	0.36	0.38	0.44	0.15	0.3704	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.28047	NA	NA	0.34907	0.166364	NA	0.232	NA	2.91473
1361	1	22837849	22837849	C	T	intronic	ZBTB40	NA	NA	NA	intronic	ENSG00000184677	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs209727	0.5	0.5	0.5	0.483626	0.3231	0.3978	0.6153	0.7632	0.2658	0.32	0.45	0.6	0.76	0.4146	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.124632	NA	NA	0.347907	0.698366	NA	0.457	NA	2.914393
1361	17	45904163	45904163	A	G	intronic	MRPL10	NA	NA	NA	intronic	ENSG00000159111	NA	NA	NA	NA	NA	17q21.32	NA	NA	NA	NA	rs3809869	0.36	0.36	0.307	0.334665	0.3797	0.6419	0.3357	0.0333	0.3783	0.39	0.63	0.3	0.04	0.3593	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.189614	NA	NA	0.347209	0.093963	NA	0.217	NA	2.913791
1361	19	35660450	35660450	T	C	intronic	FXYD5	NA	NA	NA	intronic	ENSG00000089327	NA	NA	NA	NA	NA	19q13.12	NA	NA	NA	NA	rs2285515	0.3	0.3	0.271	0.303514	0.3708	0.1399	0.3127	0.3691	0.3078	0.37	0.12	0.31	0.39	0.3369	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.409036	NA	NA	0.381163	0.330685	NA	0.42	NA	2.911137
1361	7	129037029	129037029	G	C	intronic	AHCYL2	NA	NA	NA	intronic	ENSG00000158467	NA	NA	NA	NA	NA	7q32.1	NA	NA	NA	NA	rs17168750	0.36	0.36	0.321	0.325479	0.3897	0.5933	0.3775	0.0287	0.3476	0.4	0.62	0.33	0.04	0.3494	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.408453	2.408453	NA	0.349884	0.087381	NA	0.275	NA	2.911016
1361	11	134241094	134241094	A	G	intronic	GLB1L2	NA	NA	NA	intronic	ENSG00000149328	NA	NA	NA	NA	NA	11q25	NA	NA	NA	NA	rs4937880	0.32	0.32	0.282	0.315895	0.3618	0.4206	0.4885	0.0635	0.3793	0.33	0.42	0.46	0.09	0.3596	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.562559	NA	NA	0.367692	0.12321	NA	0.225	NA	2.910908
1361	9	136648746	136648746	G	C	intronic	VAV2	NA	NA	NA	intronic	ENSG00000160293	NA	NA	NA	NA	NA	9q34.2	NA	NA	NA	NA	rs13283160	0.3	0.3	0.264	0.289137	0.3559	0.4087	0.3401	0.0681	0.3599	0.34	0.39	0.34	0.09	0.3537	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.497533	NA	NA	0.379651	0.107175	NA	0.297	NA	2.910749
1361	7	36465570	36465570	T	C	intronic	ANLN	NA	NA	NA	intronic	ENSG00000011426	NA	NA	NA	NA	NA	7p14.2	NA	NA	NA	NA	rs6957214	0.54	0.54	0.527	0.535144	0.5338	0.6567	0.549	0.3873	0.6012	0.55	0.68	0.52	0.39	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.13807	NA	NA	0.555485	0.438584	NA	0.529	NA	2.910715
1361	2	183935709	183935709	C	G	intergenic	NCKAP1,DUSP19	dist=32480;dist=7578	NA	NA	downstream	ENSG00000231203	NA	NA	NA	NA	NA	2q32.1	NA	NA	NA	NA	rs867340	0.6	0.6	0.529	0.582867	0.5895	0.8899	0.6556	0.1831	0.7485	0.6	0.9	0.63	0.21	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.637855	NA	NA	NA	NA	NA	0.5	NA	2.9105
1361	21	38539844	38539844	G	A	intronic	TTC3	NA	NA	NA	intronic	ENSG00000182670	NA	NA	NA	NA	NA	21q22.13	NA	NA	NA	NA	rs2000415	0.39	0.39	0.371	0.409944	0.3757	0.5228	0.2853	0.3041	0.5603	0.37	0.53	0.28	0.32	0.3727	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.236784	NA	NA	0.34156	0.32584	NA	0.355	NA	2.91004
1361	19	3613422	3613422	G	A	ncRNA_exonic	CACTIN-AS1	NA	NA	NA	ncRNA_exonic	ENSG00000226800	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs2074790	0.46	0.46	0.463	0.430511	0.5795	0.3294	0.6037	0.3018	0.4325	0.58	0.33	0.6	0.33	0.5865	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.266564	NA	NA	0.590966	0.410142	NA	0.399	NA	2.9097006
1361	3	55733390	55733390	C	T	intronic	ERC2	NA	NA	NA	intronic	ENSG00000187672	NA	NA	NA	NA	NA	3p14.3	NA	NA	NA	NA	rs4955865	0.35	0.35	0.311	0.344449	0.3658	0.369	0.438	0.2579	0.3476	0.36	0.36	0.45	0.23	0.3715	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.765991	NA	NA	0.353659	0.248853	NA	0.297	NA	2.909041
1361	19	8976713	8976713	A	G	intronic	MUC16	NA	NA	NA	intronic	ENSG00000181143	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs3764552	0.32	0.32	0.293	0.291134	0.3748	0.2589	0.3631	0.2496	0.2434	0.37	0.31	0.4	0.22	0.3468	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.518367	NA	NA	0.369512	0.238393	NA	0.283	NA	2.908888
1361	11	5141876	5141876	G	A	intergenic	OR52E2,OR52A5	dist=61019;dist=11046	NA	NA	ncRNA_exonic	ENSG00000205494	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs10837373	0.42	0.42	0.407	0.38778	0.3618	0.4792	0.353	0.4576	0.2505	0.37	0.49	0.36	0.45	0.3722	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.608883	NA	NA	0.357143	0.439573	NA	0.406	NA	2.908857
1361	7	142251190	142251190	G	C	intergenic	LOC730441,MTRNR2L6	dist=279122;dist=122941	NA	NA	upstream	ENSG00000211713	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs361435	0.45	0.45	0.449	0.487021	0.3002	0.6865	0.4841	0.3654	0.6401	0.29	0.7	0.46	0.39	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.265142	NA	NA	0.291012	0.348266	NA	0.399	NA	2.908788
1361	8	89081730	89081730	T	C	intronic	MMP16	NA	NA	NA	intronic	ENSG00000156103	NA	NA	NA	NA	NA	8q21.3	NA	NA	NA	NA	rs2616490	0.56	0.56	NA	0.5625	0.5169	0.6905	0.6441	0.466	0.5501	0.51	0.66	0.64	0.46	0.5745	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.650321	NA	1	NA	NA	NA	0.355	NA	2.9086
1361	19	50962062	50962062	G	A	intronic	MYBPC2	NA	NA	NA	intronic	ENSG00000086967	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs3745518	0.53	0.53	0.489	0.535942	0.5596	0.5506	0.6297	0.3601	0.6677	0.57	0.55	0.6	0.38	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.255699	NA	NA	0.531958	0.36703	NA	0.493	NA	2.908442
1361	5	170149674	170149674	A	T	intronic	KCNIP1	NA	NA	NA	intronic	ENSG00000182132	NA	NA	NA	NA	NA	5q35.1	NA	NA	NA	NA	rs12514966	0.22	0.22	0.19	0.172524	0.3867	0.0506	0.2954	0.0507	0.1554	0.39	0.04	0.36	0.05	0.298	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.134288	NA	NA	0.40686	0.123695	NA	0.225	NA	2.90844
1361	17	7721030	7721030	G	A	intronic	DNAH2	NA	NA	NA	intronic	ENSG00000183914	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs872346	0.23	0.23	0.209	0.171326	0.4225	0.0595	0.2118	0.0688	0.138	0.41	0.07	0.28	0.07	0.2805	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.315519	NA	NA	0.388953	0.133908	NA	0.188	NA	2.908047
1361	19	57820717	57820717	C	T	intergenic	ZNF460,ZNF543	dist=15281;dist=11148	NA	NA	downstream	ENSG00000268205	NA	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs4289092	0.57	0.57	0.543	0.591054	0.5924	0.3125	0.6643	0.7496	0.6104	0.59	0.31	0.67	0.77	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.03245	NA	NA	NA	NA	NA	0.536	NA	2.9076
1361	9	117064345	117064345	G	A	intronic	COL27A1	NA	NA	NA	intronic	ENSG00000196739	NA	NA	NA	NA	NA	9q32	NA	NA	NA	NA	rs1546048	0.43	0.43	0.442	0.48103	0.331	0.6796	0.4265	0.4024	0.5757	0.33	0.6	0.41	0.38	0.4068	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.143565	NA	NA	0.355	0.405583	NA	0.449	NA	2.9072
1361	11	94197260	94197260	A	G	intronic	MRE11A	NA	NA	NA	intronic	ENSG00000020922	NA	NA	NA	NA	NA	11q21	NA	NA	NA	NA	rs641936	0.39	0.39	0.399	0.388778	0.3748	0.4028	0.4107	0.3601	0.4121	0.36	0.44	0.41	0.38	0.3783	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.725321	NA	NA	0.339926	0.375965	NA	0.377	NA	2.906974
1361	11	112584001	112584001	C	G	intergenic	C11orf34,NCAM1	dist=452418;dist=247968	NA	NA	intergenic	ENSG00000254968,ENSG00000254626	dist=91549;dist=74026	NA	NA	NA	NA	11q23.2	NA	NA	NA	NA	rs11214321	0.38	0.38	0.34	0.378395	0.4264	0.5159	0.4496	0.1142	0.4939	0.42	0.51	0.42	0.14	NA	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.364124	NA	NA	NA	NA	NA	0.254	NA	2.9069334
1361	14	35488309	35488309	A	G	intronic	SRP54	NA	NA	NA	intronic	ENSG00000100883	NA	NA	NA	NA	NA	14q13.2	NA	NA	NA	NA	rs17102982	0.44	0.44	0.417	0.409944	0.3579	0.6786	0.3372	0.2746	0.4213	0.37	0.71	0.33	0.32	0.3984	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.877692	NA	NA	0.336823	0.261916	NA	0.348	NA	2.906877
1361	11	5142134	5142134	C	T	intergenic	OR52E2,OR52A5	dist=61277;dist=10788	NA	NA	ncRNA_exonic	ENSG00000205494	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs11035760	0.42	0.42	0.413	0.38778	0.3618	0.4792	0.353	0.4576	0.2505	0.37	0.49	0.36	0.45	0.3746	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.431625	NA	NA	0.356877	0.438608	NA	0.42	NA	2.906723
1361	2	127447763	127447763	G	A	intronic	GYPC	NA	NA	NA	intronic	ENSG00000136732	NA	NA	NA	NA	NA	2q14.3	NA	NA	NA	NA	rs6709803	0.64	0.64	0.641	0.614417	0.5497	0.6746	0.572	0.7466	0.4703	0.56	0.7	0.57	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.207915	NA	NA	0.543997	0.690751	NA	0.688	NA	2.906303
1361	10	62794328	62794328	G	A	intergenic	RHOBTB1,TMEM26	dist=90295;dist=372073	NA	NA	intergenic	ENSG00000227244,ENSG00000196932	dist=8150;dist=372073	NA	NA	NA	NA	10q21.2	NA	NA	NA	NA	rs2082306	0.59	0.59	0.563	0.621206	0.4274	0.5913	0.6354	0.8578	0.5215	0.42	0.61	0.62	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.814047	NA	NA	NA	NA	NA	0.572	NA	2.9059334
1361	1	187684306	187684306	C	T	intergenic	PLA2G4A,NONE	dist=726193;dist=NONE	NA	NA	upstream	ENSG00000223847	NA	NA	NA	NA	NA	1q31.1	NA	NA	NA	NA	rs4381145	0.4	0.4	NA	0.404752	0.5944	0.0437	0.5346	0.4781	0.3906	0.57	0.03	0.54	0.47	NA	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.53149	NA	NA	NA	NA	NA	0.493	NA	2.9056
1361	17	10548992	10548992	C	T	intronic	MYH3	NA	NA	NA	intronic	ENSG00000109063	NA	NA	NA	NA	NA	17p13.1	NA	NA	Name=2	NA	rs2239934	0.5	0.5	0.496	0.466054	0.7584	0.373	0.5346	0.2383	0.5204	0.74	0.36	0.52	0.27	0.6075	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.431784	NA	NA	0.728605	0.294598	NA	0.601	NA	2.905495
1361	1	248367415	248367415	C	T	downstream	OR2M3	NA	NA	NA	downstream	ENSG00000228198	NA	NA	NA	NA	NA	1q44	NA	NA	NA	NA	rs4916082	0.77	0.77	0.765	0.798323	0.7614	0.7897	0.7781	0.7466	0.9294	0.77	0.78	0.73	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.115375	NA	NA	NA	NA	NA	0.761	NA	2.9052666
1361	1	207300259	207300259	A	G	intronic	C4BPA	NA	NA	NA	intronic	ENSG00000123838	NA	NA	NA	NA	NA	1q32.2	NA	NA	NA	NA	rs2491393	0.41	0.41	0.413	0.422125	0.3728	0.2679	0.4308	0.6006	0.3845	0.36	0.33	0.4	0.58	0.3773	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.238	NA	NA	0.344651	0.55606	NA	0.464	NA	2.905249
1361	4	8293974	8293974	C	T	intronic	HTRA3	NA	NA	NA	intronic	ENSG00000170801	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs4235258	0.71	0.71	0.721	0.746006	0.5348	0.8254	0.6441	0.9145	0.726	0.53	0.82	0.67	0.91	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.68738	NA	NA	0.560025	0.858382	NA	0.616	NA	2.905175
1362	19	8976471	8976471	G	A	intronic	MUC16	NA	NA	NA	intronic	ENSG00000181143	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs3764554	0.32	0.32	0.308	0.284944	0.3748	0.255	0.3631	0.23	0.2423	0.37	0.31	0.4	0.2	0.3529	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.273806	NA	NA	0.368205	0.225065	NA	0.268	NA	2.904095
1362	17	10542803	10542803	T	C	intronic	MYH3	NA	NA	NA	intronic	ENSG00000109063	NA	NA	NA	Score=304;Name=lod=23	NA	17p13.1	NA	NA	NA	NA	rs2285473	0.5	0.5	0.497	0.466454	0.7584	0.3839	0.5346	0.2398	0.5092	0.74	0.37	0.52	0.27	0.6088	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.049939	NA	NA	0.728837	0.295279	NA	0.601	NA	2.903963
1362	12	6640267	6640267	G	A	intronic	NCAPD2	NA	NA	NA	intronic	ENSG00000010292	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs10849485	0.32	0.32	0.288	0.295927	0.3588	0.376	0.33	0.1369	0.3395	0.36	0.38	0.38	0.17	0.3546	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.143442	NA	NA	0.382736	0.176804	NA	0.203	NA	2.903864
1362	3	46479668	46479668	A	G	intronic	LTF	NA	NA	NA	intronic	ENSG00000012223	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs3213479	0.44	0.44	0.417	0.439896	0.339	0.621	0.5245	0.3275	0.4489	0.33	0.63	0.51	0.32	0.399	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.640504	NA	NA	0.358372	0.349296	NA	0.406	NA	2.903628
1362	5	149006837	149006837	A	G	intronic	ARHGEF37	NA	NA	NA	intronic	ENSG00000183111	NA	NA	NA	Score=387;Name=lod=50	NA	5q32	NA	NA	NA	NA	rs7732873	0.64	0.64	0.611	0.615216	0.7187	0.5893	0.549	0.5953	0.6094	0.73	0.58	0.61	0.61	0.6616	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.169176	NA	NA	0.716578	0.614343	NA	0.703	NA	2.903122
1362	1	65684425	65684425	C	T	intronic	AK4	NA	NA	NA	intronic	ENSG00000162433	NA	NA	NA	NA	NA	1p31.3	NA	NA	NA	NA	rs11208611	0.57	0.57	0.564	0.603435	0.3022	0.7163	0.5375	0.8623	0.4939	0.3	0.72	0.52	0.84	0.4504	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.348939	NA	NA	0.344419	0.782796	NA	0.522	NA	2.902981
1362	2	130910847	130910847	G	A	intronic	SMPD4	NA	NA	NA	intronic	ENSG00000136699	NA	NA	NA	NA	NA	2q21.1	NA	NA	NA	NA	rs4511676	0.39	0.39	0.328	0.389377	0.3469	0.4405	0.4539	0.3109	0.4407	0.35	0.47	0.42	0.34	0.3889	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.244853	NA	NA	0.362093	0.352474	NA	0.522	NA	2.902107
1362	17	79173398	79173398	A	G	intronic	AZI1	NA	NA	NA	ncRNA_exonic	ENSG00000262115	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs906176	0.46	0.46	0.385	0.461262	0.4493	0.6319	0.6268	0.1641	0.5818	0.45	0.63	0.6	0.15	0.5208	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.568686	NA	NA	0.461413	0.208447	NA	0.435	NA	2.9018203
1362	5	13769257	13769257	T	A	intronic	DNAH5	NA	NA	NA	intronic	ENSG00000039139	NA	NA	NA	NA	NA	5p15.2	NA	NA	NA	NA	rs12655133	0.35	0.35	0.323	0.324681	0.3817	0.3442	0.3429	0.3283	0.228	0.38	0.34	0.31	0.33	0.3389	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.437366	NA	NA	0.377674	0.32887	NA	0.341	NA	2.901726
1362	2	98413781	98413781	C	T	intronic	TMEM131	NA	NA	NA	intronic	ENSG00000075568	NA	NA	NA	NA	NA	2q11.2	NA	NA	NA	NA	rs2305143	0.29	0.29	0.263	0.238618	0.3926	0.1845	0.2176	0.2428	0.1452	0.41	0.22	0.21	0.25	0.3345	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.543255	NA	NA	0.371338	0.252711	ID=COSN166220;OCCURENCE=1(breast)	0.217	NA	2.901562
1362	6	32427572	32427572	C	G	intergenic	HLA-DRA,HLA-DRB5	dist=14746;dist=57582	NA	NA	downstream	ENSG00000196301	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs9268830	0.24	0.24	0.243	0.253794	0.1809	0.3829	0.2464	0.2368	0.2239	0.16	0.39	0.23	0.21	0.2389	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.4816	NA	NA	0.179558	0.223744	NA	0.239	NA	2.900642
1362	18	33744677	33744677	T	C	intronic	ELP2	NA	NA	NA	intronic	ENSG00000134759	NA	NA	NA	NA	NA	18q12.2	NA	NA	NA	NA	rs684890	0.35	0.35	0.334	0.320288	0.3817	0.2014	0.3847	0.3805	0.2526	0.4	0.19	0.43	0.39	0.3479	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.219861	NA	NA	0.369884	0.364957	NA	0.319	NA	2.900516
1362	11	7614492	7614492	A	G	intronic	PPFIBP2	NA	NA	NA	intronic	ENSG00000166387	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs7115173	0.34	0.34	0.342	0.333466	0.3827	0.4563	0.3055	0.1982	0.3589	0.36	0.47	0.31	0.2	0.3615	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.338513	2.338513	NA	0.356145	0.224898	NA	0.319	NA	2.899655
1362	3	41961168	41961168	T	C	intronic	ULK4	NA	NA	NA	intronic	ENSG00000168038	NA	NA	NA	NA	NA	3p22.1	NA	NA	NA	NA	rs1716979	0.34	0.34	0.309	0.308706	0.3708	0.5992	0.2565	0.0303	0.3589	0.38	0.59	0.26	0.04	0.3532	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.741336	NA	NA	0.376378	0.083836	NA	0.275	NA	2.899622
1362	22	32435409	32435409	G	C	intergenic	YWHAH,SLC5A1	dist=81819;dist=3610	NA	NA	upstream	ENSG00000232346	NA	NA	NA	NA	NA	22q12.3	NA	NA	NA	NA	rs130262	0.58	0.58	0.535	0.532947	0.6004	0.8472	0.6859	0.1112	0.6012	0.61	0.87	0.67	0.13	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.860031	NA	NA	NA	NA	NA	0.514	NA	2.8996
1362	1	43021810	43021810	C	T	intronic	CCDC30	NA	NA	NA	intronic	ENSG00000186409	NA	NA	NA	NA	NA	1p34.2	NA	NA	NA	NA	rs12038786	0.42	0.42	0.383	0.459864	0.3489	0.5992	0.2983	0.4448	0.5654	0.34	0.56	0.3	0.46	0.3952	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.971053	NA	NA	0.356478	0.413676	NA	0.355	NA	2.899422
1362	3	42226151	42226151	T	C	intronic	TRAK1	NA	NA	NA	intronic	ENSG00000182606	NA	NA	NA	NA	NA	3p22.1	NA	Name=GATA-2	NA	NA	rs4234445	0.78	0.78	0.762	0.742812	0.6958	0.9792	0.8199	0.646	0.6237	0.68	0.99	0.8	0.69	0.7204	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.38174	NA	NA	0.684767	0.653427	NA	0.775	NA	2.899033
1362	17	10544018	10544018	T	C	intronic	MYH3	NA	NA	NA	intronic	ENSG00000109063	NA	NA	NA	NA	NA	17p13.1	NA	NA	Name=15	NA	rs876660	0.5	0.5	0.499	0.466653	0.7584	0.3839	0.5346	0.2398	0.5102	0.74	0.37	0.52	0.27	0.614	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.730725	NA	NA	0.728837	0.29596	NA	0.616	NA	2.898763
1362	22	50635627	50635627	C	T	intronic	TRABD	NA	NA	NA	intronic	ENSG00000170638	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs5771095	0.37	0.37	0.395	0.382188	0.3579	0.3869	0.3775	0.4115	0.3661	0.36	0.36	0.34	0.43	0.3798	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.577973	NA	NA	0.3637	0.503651	NA	0.399	NA	2.8986
1362	21	32526525	32526525	C	T	intronic	TIAM1	NA	NA	NA	intronic	ENSG00000156299	NA	NA	NA	NA	NA	21q22.11	NA	NA	NA	NA	rs12482307	0.25	0.25	0.243	0.270367	0.3638	0.2401	0.2839	0.0741	0.4611	0.37	0.23	0.27	0.08	0.3523	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.452487	NA	NA	0.385322	0.130504	NA	0.196	NA	2.898578
1362	6	119653186	119653186	G	A	intronic	MAN1A1	NA	NA	NA	intronic	ENSG00000111885	NA	NA	NA	NA	NA	6q22.31	NA	NA	NA	NA	rs7754482	0.24	0.24	0.224	0.238219	0.3837	0.0427	0.245	0.2958	0.2076	0.38	0.02	0.28	0.26	0.3558	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.269555	NA	NA	0.362242	0.301714	NA	0.254	NA	2.898258
1362	2	96798510	96798510	G	A	intronic	ASTL	NA	NA	NA	intronic	ENSG00000188886	NA	NA	NA	NA	NA	2q11.1	NA	NA	NA	NA	rs1168966	0.41	0.41	0.345	0.358427	0.3579	0.6081	0.4625	0.202	0.2393	0.38	0.61	0.41	0.21	0.3822	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.415121	NA	NA	0.361744	0.221516	NA	0.449	NA	2.898156
1362	2	219294258	219294258	A	C	intronic	VIL1	NA	NA	NA	intronic	ENSG00000127831	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs6720403	0.28	0.28	0.289	0.269569	0.3767	0.0962	0.3501	0.2829	0.2628	0.37	0.1	0.33	0.3	0.3424	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.049355	NA	NA	0.382791	0.300045	NA	0.399	NA	2.898109
1362	1	237923053	237923053	C	T	intronic	RYR2	NA	NA	NA	intronic	ENSG00000198626	NA	NA	NA	NA	NA	1q43	NA	Name=c-Jun	NA	NA	rs2253831	0.77	0.77	0.786	0.761581	0.6988	0.8204	0.7464	0.8275	0.6871	0.71	0.81	0.73	0.84	0.7109	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.703688	1.703688	NA	0.692336	0.800707	NA	0.79	NA	2.897964
1362	1	153215661	153215661	G	T	intergenic	PRR9,LOR	dist=23868;dist=16518	NA	NA	intergenic	ENSG00000230779,ENSG00000203782	dist=17179;dist=16515	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs6695899	0.4	0.4	0.349	0.420128	0.4354	0.4177	0.5749	0.2262	0.5593	0.42	0.45	0.52	0.19	NA	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.003775	NA	NA	NA	NA	NA	0.399	NA	2.8979334
1362	17	26022936	26022936	G	C	intergenic	LGALS9,NOS2	dist=46350;dist=60856	NA	NA	intergenic	ENSG00000263604,ENSG00000263472	dist=11766;dist=7002	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs4239248	0.51	0.51	0.496	0.513179	0.4354	0.4692	0.4971	0.6513	0.4632	0.43	0.49	0.49	0.68	NA	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.140643	NA	NA	NA	NA	NA	0.638	NA	2.8979334
1362	8	59498190	59498190	G	A	intronic	NSMAF	NA	NA	NA	intronic	ENSG00000035681	NA	NA	NA	NA	NA	8q12.1	NA	NA	NA	NA	rs12677290	0.46	0.46	0.461	0.476238	0.3867	0.6012	0.2608	0.5976	0.4284	0.37	0.57	0.3	0.58	0.3761	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.256881	NA	NA	0.339302	0.561507	NA	0.413	NA	2.897898
1362	1	228447513	228447513	T	G	intronic	OBSCN	NA	NA	NA	intronic	ENSG00000154358	NA	NA	NA	NA	NA	1q42.13	NA	NA	NA	NA	rs7525075	0.31	0.31	0.266	0.296925	0.3569	0.1915	0.3761	0.3601	0.2025	0.36	0.18	0.41	0.32	0.3568	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.732224	NA	NA	0.389001	0.38242	NA	0.341	NA	2.897299
1362	1	228447519	228447519	T	A	intronic	OBSCN	NA	NA	NA	intronic	ENSG00000154358	NA	NA	NA	NA	NA	1q42.13	NA	NA	NA	NA	rs7525078	0.31	0.31	0.255	0.296925	0.3569	0.1915	0.3761	0.3601	0.2025	0.36	0.18	0.41	0.32	0.3568	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.15455	NA	NA	0.389001	0.38242	NA	0.341	NA	2.897299
1362	8	21550768	21550768	A	C	UTR3	GFRA2	NM_001165038:c.*22T>G,NM_001495:c.*22T>G,NM_001165039:c.*22T>G	NA	NA	UTR3	ENSG00000168546	ENST00000524240:c.*22T>G,ENST00000306793:c.*1471T>G,ENST00000400782:c.*22T>G,ENST00000517328:c.*22T>G,ENST00000518077:c.*22T>G	NA	NA	NA	NA	8p21.3	NA	NA	NA	NA	rs15881	0.51	0.51	0.535	0.539936	0.4672	0.4782	0.4121	0.6876	0.5695	0.47	0.49	0.38	0.68	0.4951	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.037821	NA	NA	0.473842	0.666497	NA	0.558	NA	2.8971914
1362	7	16815786	16815786	C	G	intronic	TSPAN13	NA	NA	NA	intronic	ENSG00000106537	NA	NA	NA	NA	NA	7p21.1	NA	NA	NA	NA	rs2290836	0.36	0.36	0.37	0.333466	0.3837	0.2024	0.3415	0.469	0.228	0.39	0.21	0.36	0.49	0.3424	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.037955	NA	NA	0.376744	0.442805	NA	0.413	NA	2.897156
1362	13	110859069	110859069	G	C	intronic	COL4A1	NA	NA	NA	intronic	ENSG00000187498	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs9588116	0.39	0.39	0.387	0.370008	0.3767	0.2292	0.4712	0.4924	0.271	0.38	0.24	0.43	0.53	0.3672	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.579139	NA	NA	0.360116	0.474807	NA	0.442	NA	2.895984
1362	3	165826426	165826426	A	G	intergenic	BCHE,ZBBX	dist=271173;dist=1131651	NA	NA	intergenic	ENSG00000114200,ENSG00000242178	dist=271166;dist=51383	NA	NA	NA	NA	3q26.1	NA	NA	NA	NA	rs4312620	0.42	0.42	0.408	0.423522	0.4374	0.3006	0.3905	0.6067	0.3119	0.43	0.33	0.39	0.53	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.183895	NA	NA	NA	NA	NA	0.435	NA	2.8959334
1362	3	194783823	194783823	A	G	intergenic	LOC100507391,XXYLT1	dist=280926;dist=5190	NA	NA	intergenic	ENSG00000238031,ENSG00000173950	dist=230502;dist=5185	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs11923729	0.63	0.63	0.621	0.63778	0.4374	0.9792	0.4323	0.6899	0.5675	0.44	0.98	0.4	0.7	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.01186	NA	NA	NA	NA	NA	0.572	NA	2.8959334
1362	11	125478209	125478209	C	T	intronic	STT3A	NA	NA	NA	intronic	ENSG00000134910	NA	NA	NA	NA	NA	11q24.2	NA	NA	NA	NA	rs6590153	0.41	0.41	0.392	0.419329	0.3787	0.4335	0.2752	0.5227	0.409	0.37	0.38	0.31	0.57	0.3705	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.692846	NA	NA	0.355199	0.484325	NA	0.391	NA	2.895601
1362	19	33635877	33635877	T	C	intronic	WDR88	NA	NA	NA	intronic	ENSG00000166359	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs3848598	0.45	0.45	0.431	0.512181	0.3241	0.5248	0.5692	0.4977	0.6718	0.32	0.53	0.51	0.5	0.4434	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.135301	NA	NA	0.337093	0.481162	NA	0.42	NA	2.895407
1363	19	19545990	19545990	T	C	intronic	GATAD2A	NA	NA	NA	intronic	ENSG00000167491	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs2916076	0.42	0.42	0.43	0.477636	0.337	0.3204	0.4813	0.6611	0.5337	0.33	0.31	0.46	0.67	0.4088	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.334198	NA	NA	0.359576	0.63074	NA	0.5	NA	2.894624
1363	11	117252489	117252489	T	C	exonic	CEP164	NA	synonymous SNV	CEP164:NM_001271933:exon12:c.T1491C:p.P497P,CEP164:NM_014956:exon13:c.T1482C:p.P494P	exonic	ENSG00000110274	NA	synonymous SNV	ENSG00000110274:ENST00000278935:exon13:c.T1482C:p.P494P	NA	NA	11q23.3	NA	NA	NA	NA	rs897836	0.91	0.91	0.905	0.901358	0.9314	0.8452	0.9092	0.9599	0.8436	0.93	0.87	0.9	0.95	0.9124	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.155452	NA	NA	0.928455	0.950524	NA	0.819	NA	2.8944116
1363	7	131060277	131060277	G	A	intronic	MKLN1	NA	NA	NA	intronic	ENSG00000128585	NA	NA	NA	NA	NA	7q32.3	NA	NA	NA	NA	rs3823557	0.37	0.37	0.37	0.364617	0.3419	0.5129	0.3631	0.3222	0.2935	0.36	0.5	0.3	0.31	0.3738	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.546769	NA	NA	0.390014	0.338175	NA	0.442	NA	2.894286
1363	12	6623389	6623389	T	C	intronic	NCAPD2	NA	NA	NA	intronic	ENSG00000010292	NA	NA	NA	NA	NA	12p13.31	Score=911;Name=V$TGIF_01	NA	NA	NA	rs4764605	0.7	0.7	0.687	0.694089	0.6978	0.5456	0.7767	0.7958	0.6472	0.7	0.54	0.78	0.83	0.7059	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.758954	NA	NA	0.702326	0.796868	NA	0.717	NA	2.893974
1363	7	130459242	130459242	C	T	intergenic	KLF14,MIR29A	dist=40354;dist=102264	NA	NA	intergenic	ENSG00000174595,ENSG00000271522	dist=40354;dist=15725	NA	NA	NA	NA	7q32.3	NA	NA	NA	NA	rs34748838	0.32	0.32	0.3	0.292732	0.4394	0.3254	0.3602	0.0552	0.3814	0.46	0.32	0.38	0.08	NA	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.331287	NA	NA	NA	NA	NA	0.312	NA	2.8939334
1363	8	91940446	91940446	C	T	intronic	NECAB1	NA	NA	NA	intronic	ENSG00000123119	NA	NA	NA	NA	NA	8q21.3	NA	NA	NA	NA	rs1002583	0.47	0.47	0.446	0.4375	0.3519	0.6062	0.5245	0.3835	0.363	0.35	0.64	0.49	0.43	0.4059	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.064108	NA	NA	0.348485	0.381615	NA	0.355	NA	2.893715
1363	11	6647978	6647978	C	T	intronic	DCHS1	NA	NA	NA	intronic	ENSG00000166341	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs4442534	0.36	0.36	0.364	0.320887	0.3748	0.4246	0.3401	0.2042	0.3027	0.38	0.45	0.34	0.24	0.363	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.697377	NA	NA	0.368948	0.231486	NA	0.457	NA	2.893252
1363	19	33635853	33635853	G	A	intronic	WDR88	NA	NA	NA	intronic	ENSG00000166359	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs3848597	0.45	0.45	0.441	0.511581	0.3241	0.5258	0.5692	0.4947	0.6718	0.32	0.54	0.51	0.5	0.4463	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.952856	NA	NA	0.33686	0.477758	NA	0.391	NA	2.89274
1363	10	72614421	72614421	T	C	intronic	SGPL1	NA	NA	NA	intronic	ENSG00000166224	NA	NA	NA	NA	NA	10q22.1	NA	NA	NA	NA	rs2171157	0.36	0.36	0.314	0.380791	0.337	0.4841	0.4092	0.2254	0.5092	0.35	0.46	0.39	0.23	0.3913	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.846639	NA	NA	0.379419	0.254426	ID=COSN163661;OCCURENCE=1(breast)	0.362	NA	2.892281
1363	1	203032922	203032922	C	T	intronic	PPFIA4	NA	NA	NA	intronic	ENSG00000143847	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs1416262	0.29	0.29	0.272	0.289736	0.3807	0.2054	0.2752	0.2451	0.3538	0.39	0.21	0.31	0.22	0.3503	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.754601	NA	NA	0.376746	0.274415	NA	0.319	NA	2.892254
1363	2	100081323	100081323	C	T	intronic	REV1	NA	NA	NA	intronic	ENSG00000135945	NA	NA	NA	NA	NA	2q11.2	NA	NA	NA	NA	rs28369943	0.58	0.58	0.536	0.586661	0.5666	0.3621	0.7003	0.7549	0.5307	0.58	0.36	0.7	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.348807	NA	NA	0.541169	0.729769	NA	0.558	NA	2.892231
1363	1	227696033	227696033	T	C	intergenic	CDC42BPA,ZNF678	dist=190207;dist=55187	NA	NA	downstream	ENSG00000235827	NA	NA	NA	NA	NA	1q42.13	NA	NA	NA	NA	rs2018654	0.49	0.49	0.462	0.464058	0.6083	0.4167	0.5749	0.3275	0.4703	0.61	0.45	0.55	0.32	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.807948	NA	NA	NA	NA	NA	0.493	NA	2.8917
1363	1	227696110	227696110	G	A	intergenic	CDC42BPA,ZNF678	dist=190284;dist=55110	NA	NA	downstream	ENSG00000235827	NA	NA	NA	NA	NA	1q42.13	NA	NA	NA	NA	rs2018651	0.5	0.5	0.47	0.468051	0.6083	0.4127	0.5764	0.3495	0.4642	0.61	0.45	0.55	0.34	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.617523	NA	NA	NA	NA	NA	0.543	NA	2.8917
1363	12	46759017	46759017	T	A	intronic	SLC38A2	NA	NA	NA	exonic	ENSG00000134294	NA	synonymous SNV	ENSG00000134294:ENST00000551374:exon1:c.A33T:p.S11S	NA	NA	12q13.11	NA	NA	NA	NA	rs7968173	0.75	0.75	0.788	0.757588	0.6461	0.8016	0.6657	0.9486	0.6339	0.67	0.79	0.66	0.91	0.6749	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.120658	NA	NA	0.620698	0.898547	NA	0.681	NA	2.8916353
1363	10	114192285	114192285	G	A	intronic	ZDHHC6	NA	NA	NA	intronic	ENSG00000023041	NA	NA	NA	NA	NA	10q25.2	NA	NA	NA	NA	rs2306158	0.35	0.35	0.321	0.352835	0.3827	0.5466	0.4481	0.0393	0.4785	0.39	0.52	0.43	0.04	0.3788	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.693923	NA	NA	0.346977	0.094644	NA	0.362	NA	2.891523
1363	16	18849858	18849858	C	T	intronic	SMG1	NA	NA	NA	intronic	ENSG00000157106	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs35168818	0.24	0.24	0.211	0.242212	0.3926	0.1091	0.2983	0.1346	0.3303	0.39	0.1	0.28	0.13	0.3245	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.415207	NA	NA	0.39155	0.178611	NA	0.341	NA	2.89135
1363	22	32482321	32482321	T	G	intronic	SLC5A1	NA	NA	NA	intronic	ENSG00000100170	NA	NA	NA	NA	NA	22q12.3	NA	NA	NA	NA	rs5998233	0.41	0.41	0.432	0.454073	0.3588	0.1478	0.2997	0.885	0.3947	0.36	0.13	0.32	0.87	0.3742	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.659996	NA	NA	0.375698	0.805946	NA	0.471	NA	2.891302
1363	1	22913153	22913153	T	C	intronic	EPHA8	NA	NA	NA	intronic	ENSG00000070886	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs638058	0.43	0.43	0.433	0.485224	0.3658	0.2937	0.3818	0.7284	0.5501	0.36	0.29	0.4	0.72	0.3955	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.500701	NA	NA	0.347558	0.666137	NA	0.406	NA	2.891142
1363	19	7506755	7506755	A	G	intronic	ARHGEF18	NA	NA	NA	intronic	ENSG00000104880,ENSG00000268861	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs2287910	0.46	0.46	0.431	0.48742	0.339	0.6012	0.4481	0.5303	0.4928	0.33	0.57	0.43	0.56	0.4057	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.470828	NA	NA	0.364884	0.51498	ID=COSN165706;OCCURENCE=1(breast)	0.514	NA	2.890416
1363	19	7506982	7506982	C	G	intronic	ARHGEF18	NA	NA	NA	intronic	ENSG00000104880,ENSG00000268861	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs10424311	0.46	0.46	0.44	0.484625	0.339	0.6012	0.4481	0.5189	0.4939	0.33	0.57	0.43	0.54	0.4053	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.118074	NA	NA	0.365349	0.50522	NA	0.493	NA	2.890351
1363	16	18839496	18839496	G	C	intronic	SMG1	NA	NA	NA	intronic	ENSG00000157106	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs12448649	0.23	0.23	0.205	0.242612	0.3917	0.1091	0.2983	0.1346	0.3333	0.39	0.09	0.28	0.13	0.3299	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.621131	NA	NA	0.388255	0.173351	NA	0.341	NA	2.890145
1363	1	32155911	32155911	G	T	intronic	COL16A1	NA	NA	NA	intronic	ENSG00000084636	NA	NA	NA	NA	NA	1p35.2	NA	NA	NA	NA	rs6425780	0.44	0.44	0.462	0.436502	0.5646	0.1508	0.3357	0.6929	0.3241	0.55	0.12	0.39	0.69	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.232413	NA	NA	0.545883	0.658237	ID=COSN163031;OCCURENCE=1(breast)	0.5	NA	2.889517
1363	11	125326026	125326026	C	T	intronic	FEZ1	NA	NA	NA	intronic	ENSG00000149557	NA	NA	NA	NA	NA	11q24.2	NA	NA	NA	NA	rs2241514	0.32	0.32	0.317	0.338658	0.3678	0.3512	0.2579	0.2458	0.4785	0.36	0.35	0.28	0.23	0.3576	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.258658	NA	NA	0.38509	0.288505	NA	0.413	NA	2.88951
1363	8	22172702	22172702	C	T	intronic	PIWIL2	NA	NA	NA	intronic	ENSG00000197181	NA	NA	NA	NA	NA	8p21.3	NA	NA	NA	NA	rs4397403	0.33	0.33	0.277	0.322883	0.3787	0.5317	0.379	0.0303	0.4059	0.38	0.47	0.4	0.05	0.3757	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.360211	NA	NA	0.356163	0.083069	NA	0.159	NA	2.889437
1363	11	124967487	124967487	T	A	UTR3	TMEM218	NM_001258247:c.*15A>T,NM_001080546:c.*15A>T,NM_001258246:c.*15A>T,NM_001258245:c.*15A>T,NM_001258239:c.*15A>T,NM_001258240:c.*15A>T,NM_001258241:c.*15A>T,NM_001258242:c.*15A>T,NM_001258243:c.*15A>T,NM_001258238:c.*15A>T,NM_001258244:c.*15A>T	NA	NA	UTR3	ENSG00000150433	ENST00000455225:c.*15A>T,ENST00000531909:c.*15A>T,ENST00000528724:c.*15A>T,ENST00000532156:c.*178A>T,ENST00000279968:c.*15A>T,ENST00000532407:c.*15A>T,ENST00000526175:c.*15A>T,ENST00000527766:c.*15A>T,ENST00000529609:c.*178A>T,ENST00000529583:c.*15A>T,ENST00000527271:c.*15A>T	NA	NA	NA	NA	11q24.2	NA	NA	NA	NA	rs1043821	0.57	0.57	0.589	0.558506	0.4652	0.6687	0.3804	0.6929	0.4857	0.48	0.69	0.39	0.72	0.5039	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.101964	NA	NA	0.475343	0.660154	NA	0.543	NA	2.8888904
1363	19	14866698	14866698	C	T	intronic	EMR2	NA	NA	NA	intronic	ENSG00000127507	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs28420691	0.49	0.49	0.478	0.542532	0.338	0.5833	0.4323	0.6604	0.6299	0.36	0.55	0.41	0.66	0.4348	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.682971	NA	NA	0.338721	0.618702	NA	0.391	NA	2.888479
1363	8	6372172	6372172	T	C	intronic	ANGPT2,MCPH1	NA	NA	NA	intronic	ENSG00000091879,ENSG00000147316	NA	NA	NA	NA	NA	8p23.1	NA	NA	NA	NA	rs2979671	0.31	0.31	0.32	0.325679	0.3897	0.2123	0.2925	0.3661	0.3456	0.39	0.19	0.32	0.34	0.3528	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.606223	NA	NA	0.36907	0.369042	NA	0.326	NA	2.88843
1363	1	42915753	42915753	T	C	intronic	ZMYND12	NA	NA	NA	intronic	ENSG00000066185	NA	NA	NA	NA	NA	1p34.2	NA	NA	NA	NA	rs11210647	0.42	0.42	0.402	0.46246	0.3529	0.5992	0.3012	0.4501	0.5654	0.34	0.56	0.31	0.46	0.3961	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.064353	2.064353	NA	0.362791	0.427826	NA	0.355	NA	2.888209
1363	14	70712880	70712880	A	C	ncRNA_exonic	ADAM21P1	NA	NA	NA	ncRNA_exonic	ENSG00000235812	NA	NA	NA	NA	NA	14q24.2	NA	NA	NA	NA	rs2296918	0.87	0.87	0.802	0.882588	0.8887	0.9048	0.9323	0.7935	0.9387	0.89	0.89	0.93	0.77	0.8898	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.111732	NA	1	NA	NA	NA	0.812	NA	2.8881666
1363	3	45754749	45754749	G	A	intronic	SACM1L	NA	NA	NA	intronic	ENSG00000211456	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs2248991	0.43	0.43	0.402	0.404952	0.5636	0.2639	0.4539	0.4297	0.319	0.58	0.22	0.48	0.4	NA	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.621386	NA	NA	0.548712	0.438584	NA	0.42	NA	2.887688
1363	22	32590522	32590522	T	C	intronic	RFPL2	NA	NA	NA	intronic	ENSG00000128253	NA	NA	NA	NA	NA	22q12.3	NA	NA	NA	NA	rs136484	0.32	0.32	0.317	0.340455	0.3877	0.1419	0.2349	0.5371	0.3057	0.37	0.13	0.25	0.5	0.3569	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.305318	NA	NA	0.368017	0.487548	NA	0.326	NA	2.887383
1363	15	62199342	62199342	T	A	intronic	VPS13C	NA	NA	NA	intronic	ENSG00000129003	NA	NA	NA	NA	NA	15q22.2	NA	NA	NA	NA	rs28413840	0.53	0.53	0.496	0.513578	0.5547	0.4712	0.6628	0.4773	0.4581	0.56	0.49	0.63	0.46	0.5583	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.440392	NA	NA	NA	NA	NA	0.435	NA	2.887
1363	3	30885806	30885806	T	C	intronic	GADL1	NA	NA	NA	intronic	ENSG00000144644	NA	NA	NA	NA	NA	3p24.1	NA	NA	NA	NA	rs1494738	0.47	0.47	0.461	0.520567	0.333	0.624	0.5173	0.5545	0.5634	0.34	0.6	0.49	0.51	0.4383	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.006368	NA	NA	0.342093	0.564458	NA	0.283	NA	2.886607
1363	18	10468453	10468453	C	T	intronic	APCDD1	NA	NA	NA	intronic	ENSG00000154856	NA	NA	NA	NA	NA	18p11.22	NA	NA	NA	NA	rs539412	0.46	0.46	0.454	0.424121	0.3847	0.6389	0.4452	0.3048	0.3896	0.39	0.67	0.44	0.35	0.3789	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.637553	NA	NA	0.35	0.29823	NA	0.37	NA	2.8864
1363	17	42002446	42002446	T	G	intergenic	FAM215A,PPY	dist=7091;dist=15726	NA	NA	intergenic	ENSG00000267166,ENSG00000267420	dist=2077;dist=2485	NA	NA	NA	NA	17q21.31	NA	NA	NA	NA	rs1731900	0.24	0.24	0.21	0.204273	0.4473	0.0972	0.2738	0.0628	0.2065	0.45	0.07	0.29	0.07	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.528577	NA	NA	NA	NA	NA	0.181	NA	2.8860334
1363	9	137687038	137687038	A	G	intronic	COL5A1	NA	NA	NA	intronic	ENSG00000130635	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs4072882	0.68	0.68	0.713	0.69389	0.5378	0.8284	0.5476	0.8661	0.5869	0.55	0.82	0.56	0.83	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.406945	NA	NA	0.576367	0.839595	NA	0.717	NA	2.885833
1363	6	33232521	33232521	C	T	intronic	VPS52	NA	NA	NA	intronic	ENSG00000223501	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs213201	0.39	0.39	0.418	0.38778	0.3847	0.5794	0.3703	0.2458	0.3978	0.37	0.61	0.32	0.22	0.3715	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.436121	NA	NA	0.35825	0.256122	NA	0.362	NA	2.88555
1363	22	22707443	22707443	T	A	intergenic	LOC96610,ZNF280B	dist=30119;dist=131329	NA	NA	intronic	ENSG00000211647	NA	NA	NA	NA	NA	22q11.22	NA	NA	NA	NA	rs75417423	NA	NA	0.199	0.195887	0.2217	0.2024	0.1585	0.1785	0.2127	NA	NA	NA	NA	0.3419	0.22	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.401041	NA	NA	0.217755	0.188788	NA	0.116	NA	2.8853117
1363	2	99998561	99998561	C	T	intronic	EIF5B	NA	NA	NA	intronic	ENSG00000158417	NA	NA	NA	NA	NA	2q11.2	NA	NA	NA	NA	rs2290256	0.59	0.59	0.559	0.589856	0.5696	0.3671	0.7032	0.7595	0.5307	0.58	0.37	0.7	0.76	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.846069	NA	NA	0.545255	0.737717	NA	0.572	NA	2.885145
1364	11	107852217	107852217	A	G	intergenic	RAB39A,CUL5	dist=18009;dist=27191	NA	NA	intergenic	ENSG00000179331,ENSG00000166266	dist=18009;dist=27242	NA	NA	NA	NA	11q22.3	NA	NA	NA	NA	rs6588994	0.38	0.38	0.365	0.380791	0.4493	0.3224	0.2767	0.4145	0.3988	0.47	0.31	0.26	0.42	NA	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.670878	NA	NA	NA	NA	NA	0.333	NA	2.8840334
1364	8	72211834	72211834	A	C	intronic	EYA1	NA	NA	NA	intronic	ENSG00000104313	NA	NA	NA	NA	NA	8q13.3	NA	NA	NA	NA	rs3779747	0.5	0.5	0.466	0.472045	0.3489	0.6954	0.5548	0.3941	0.4151	0.35	0.74	0.56	0.42	0.4091	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.976552	NA	NA	0.358655	0.380282	NA	0.58	NA	2.883345
1364	4	93511481	93511481	G	A	intronic	GRID2	NA	NA	NA	intronic	ENSG00000152208	NA	NA	NA	NA	NA	4q22.1	NA	NA	NA	NA	rs2870639	0.38	0.38	0.353	0.407548	0.3618	0.4296	0.4078	0.3994	0.4427	0.35	0.38	0.42	0.4	0.3814	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.496856	NA	NA	0.373605	0.402633	NA	0.275	NA	2.883195
1364	15	101910511	101910511	A	C	intronic	PCSK6	NA	NA	NA	intronic	ENSG00000140479	NA	NA	NA	NA	NA	15q26.3	NA	NA	NA	NA	rs2073591	0.49	0.49	0.46	0.452875	0.3579	0.6736	0.6268	0.3896	0.2853	0.36	0.69	0.57	0.38	0.4113	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.382782	NA	NA	0.347633	0.351053	NA	0.594	NA	2.883167
1364	17	10243589	10243589	C	A	intronic	MYH13	NA	NA	NA	ncRNA_intronic	ENSG00000264067	NA	NA	NA	NA	NA	17p13.1	NA	NA	Name=6	NA	rs4445936	0.79	0.79	0.761	0.754792	0.8141	0.8909	0.8444	0.6225	0.6687	0.81	0.87	0.85	0.61	0.8072	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.298211	NA	NA	0.828912	0.698396	NA	0.703	NA	2.8831213
1364	17	8739821	8739821	G	C	intronic	PIK3R6	NA	NA	NA	intronic	ENSG00000174083	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs12948724	0.45	0.45	0.441	0.475839	0.3429	0.5367	0.4308	0.5703	0.454	0.35	0.53	0.38	0.55	0.4113	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.416497	NA	NA	0.362802	0.541945	NA	0.478	NA	2.882998
1364	2	241815307	241815307	C	T	intronic	AGXT	NA	NA	NA	intronic	ENSG00000172482	NA	NA	NA	NA	NA	2q37.3	NA	NA	NA	NA	rs12478859	0.22	0.22	0.242	0.239816	0.4085	0.2054	0.2709	0.1339	0.2229	0.32	0.15	0.25	0.12	0.3268	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.589764	NA	NA	0.38186	0.16364	NA	NA	NA	2.88284
1364	19	7879326	7879326	G	A	intergenic	CLEC4GP1,EVI5L	dist=23428;dist=15835	NA	NA	upstream	ENSG00000269763	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs12984528	0.56	0.56	0.527	0.569888	0.6173	0.6101	0.6499	0.2837	0.8098	0.62	0.64	0.64	0.31	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.674246	NA	NA	NA	NA	NA	0.514	NA	2.8827
1364	3	179448383	179448383	C	T	intronic	USP13	NA	NA	NA	intronic	ENSG00000058056	NA	NA	NA	Score=265;Name=lod=16	NA	3q26.33	NA	NA	NA	NA	rs3213761	0.71	0.71	0.67	0.689696	0.6809	0.7629	0.7968	0.6369	0.6186	0.69	0.75	0.78	0.64	0.7133	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.849947	2.849947	NA	0.723256	0.648434	NA	0.725	NA	2.882544
1364	17	7245674	7245674	G	A	intronic	ACAP1	NA	NA	NA	intronic	ENSG00000072818	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs8069505	0.24	0.24	0.226	0.233227	0.3877	0.0258	0.2983	0.2322	0.2434	0.38	0.03	0.32	0.21	0.3154	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.756825	NA	NA	0.414535	0.260781	NA	0.261	NA	2.882365
1364	1	181719679	181719679	C	T	intronic	CACNA1E	NA	NA	NA	intronic	ENSG00000198216	NA	NA	NA	NA	NA	1q25.3	NA	NA	NA	NA	rs704332	0.57	0.57	0.578	0.548522	0.5467	0.7192	0.513	0.4554	0.5256	0.55	0.75	0.53	0.42	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.44974	NA	NA	0.571025	0.479769	NA	0.623	NA	2.882275
1364	1	247322298	247322298	G	T	intronic	ZNF124	NA	NA	NA	intronic	ENSG00000196418	NA	NA	NA	NA	NA	1q44	NA	NA	NA	NA	rs6675536	0.4	0.4	0.396	0.475639	0.3559	0.1329	0.3804	0.8351	0.5337	0.35	0.13	0.41	0.78	0.4006	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.769789	NA	NA	0.361447	0.747048	NA	0.406	NA	2.882053
1364	11	6647622	6647622	T	C	intronic	DCHS1	NA	NA	NA	intronic	ENSG00000166341	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs11827437	0.37	0.37	0.375	0.336661	0.3748	0.4246	0.3429	0.2625	0.3027	0.38	0.45	0.35	0.3	0.3742	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.48333	NA	NA	0.368948	0.275329	NA	0.478	NA	2.882052
1364	17	38189049	38189049	G	A	intronic	MED24	NA	NA	NA	intronic	ENSG00000008838	NA	NA	NA	NA	NA	17q21.1	NA	NA	NA	NA	rs4072639	0.32	0.32	0.289	0.318291	0.3648	0.4246	0.4193	0.0673	0.4284	0.36	0.41	0.42	0.08	0.381	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.392141	NA	NA	0.372907	0.112801	NA	0.362	NA	2.881293
1364	1	186141301	186141301	G	A	ncRNA_intronic	MIR548F1	NA	NA	NA	intronic	ENSG00000143341	NA	NA	NA	NA	NA	1q31.1	NA	NA	NA	NA	rs4651302	0.64	0.64	0.639	0.655551	0.4662	0.5863	0.6196	0.9539	0.544	0.48	0.6	0.62	0.94	0.5409	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.012407	NA	NA	0.445	0.872674	NA	0.551	NA	2.8812333
1364	1	204085609	204085609	A	G	intronic	SOX13	NA	NA	NA	intronic	ENSG00000143842	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs7551756	0.43	0.43	0.412	0.395567	0.3887	0.7292	0.3184	0.2489	0.3119	0.39	0.69	0.3	0.29	0.3782	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.811973	NA	NA	0.352138	0.267013	NA	0.493	NA	2.880962
1364	7	132709293	132709293	C	T	intronic	CHCHD3	NA	NA	NA	intronic	ENSG00000106554	NA	NA	NA	NA	NA	7q33	NA	NA	NA	NA	rs13235276	0.4	0.4	0.354	0.35643	0.3777	0.3909	0.4856	0.3502	0.2157	0.39	0.41	0.44	0.36	0.3657	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.638675	NA	NA	0.375698	0.353155	NA	0.391	NA	2.880902
1364	2	64796847	64796847	A	G	intronic	AFTPH	NA	NA	NA	intronic	ENSG00000119844	NA	NA	NA	NA	NA	2p14	NA	NA	NA	NA	rs2287532	0.3	0.3	0.298	0.31849	0.3897	0.2044	0.3012	0.3003	0.3998	0.38	0.2	0.34	0.26	0.3517	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.636242	NA	NA	0.37814	0.322515	ID=COSN166118;OCCURENCE=1(breast)	0.319	NA	2.88046
1364	2	43514036	43514036	G	A	intronic	THADA	NA	NA	NA	intronic	ENSG00000115970	NA	NA	NA	NA	NA	2p21	NA	NA	NA	NA	rs11900952	0.44	0.44	0.48	0.485823	0.3608	0.2292	0.3919	0.8071	0.5112	0.36	0.26	0.41	0.82	0.3825	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.109642	2.109642	NA	0.376395	0.697999	NA	0.58	NA	2.880305
1364	16	5128902	5128902	T	C	intronic	ALG1	NA	NA	NA	intronic	ENSG00000033011	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs2110338	0.34	0.34	0.305	0.272963	0.4016	0.2937	0.3876	0.1725	0.1738	0.41	0.3	0.41	0.21	0.3399	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.181929	NA	NA	0.378543	0.212093	NA	0.196	NA	2.879957
1364	11	74407676	74407676	C	T	intronic	CHRDL2	NA	NA	NA	intronic	ENSG00000054938	NA	NA	NA	NA	NA	11q13.4	NA	Name=USF-1,AP-2gamma,BAF155	NA	NA	rs3819242	0.55	0.55	0.568	0.478834	0.7316	0.4573	0.5548	0.2708	0.4683	0.72	0.51	0.6	0.32	0.6404	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.069727	NA	NA	0.748311	0.3475	NA	0.514	NA	2.879689
1364	4	5843196	5843196	T	G	intronic	CRMP1	NA	NA	NA	intronic	ENSG00000072832	NA	NA	NA	NA	NA	4p16.2	NA	NA	NA	NA	rs2286283	0.4	0.4	0.421	0.388179	0.3628	0.3304	0.2896	0.5885	0.273	0.38	0.37	0.3	0.57	0.3712	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.009807	NA	NA	0.387209	0.569224	NA	0.384	NA	2.878791
1364	4	88577573	88577573	A	G	intronic	DMP1	NA	NA	NA	ncRNA_intronic	ENSG00000249001	NA	NA	NA	NA	NA	4q22.1	NA	NA	NA	NA	rs2615480	0.84	0.84	0.832	0.828874	0.7217	0.9028	0.8329	0.9281	0.726	0.74	0.9	0.84	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.247313	NA	NA	0.732872	0.881503	NA	0.855	NA	2.8787613
1364	20	62294015	62294015	C	T	ncRNA_intronic	RTEL1-TNFRSF6B	NA	NA	NA	intronic	ENSG00000026036,ENSG00000258366	NA	NA	NA	NA	NA	20q13.33	NA	NA	NA	NA	rs2297434	0.37	0.37	0.38	0.341653	0.5179	0.1171	0.4323	0.3759	0.2812	0.51	0.12	0.46	0.38	0.4425	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.008647	NA	NA	0.494417	0.388283	NA	0.37	NA	2.8785163
1364	1	248085341	248085341	T	A	downstream	OR2T8	NA	NA	NA	downstream	ENSG00000177462	NA	NA	NA	NA	NA	1q44	NA	NA	NA	NA	rs4925773	0.65	0.65	0.622	0.625998	0.7883	0.4474	0.7248	0.6747	0.5072	0.78	0.43	0.73	0.65	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.625863	NA	NA	NA	NA	NA	0.703	NA	2.8783666
1364	2	130948303	130948303	T	C	downstream	MZT2B	NA	NA	NA	downstream	ENSG00000152082	NA	NA	NA	NA	NA	2q21.1	NA	NA	NA	NA	rs12612244	0.42	0.42	0.337	0.417332	0.3718	0.4425	0.4856	0.3782	0.4427	0.37	0.47	0.47	0.4	0.4166	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.088985	NA	NA	NA	NA	NA	0.536	NA	2.8782666
1364	9	138662309	138662309	A	G	intronic	KCNT1	NA	NA	NA	intronic	ENSG00000107147	NA	NA	NA	NA	NA	9q34.3	NA	Name=c-Myc	NA	NA	rs10776844	0.71	0.71	0.699	0.744209	0.7058	0.7113	0.6542	0.7799	0.8333	0.7	0.7	0.68	0.76	0.7126	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.997473	NA	NA	0.703372	0.77634	NA	0.717	NA	2.878228
1364	19	53263676	53263676	T	C	intergenic	ZNF611,ZNF600	dist=25369;dist=5072	NA	NA	intergenic	ENSG00000213020,ENSG00000189190	dist=25369;dist=3772	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs8103837	0.48	0.48	0.422	0.483626	0.4553	0.4921	0.6023	0.5204	0.3701	0.45	0.5	0.55	0.47	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.801065	NA	NA	NA	NA	ID=COSN165914;OCCURENCE=1(breast)	0.464	NA	2.8780334
1364	3	166960278	166960278	G	T	intronic	ZBBX	NA	NA	NA	intronic	ENSG00000169064	NA	NA	NA	NA	NA	3q26.1	NA	NA	NA	NA	rs11923256	0.22	0.22	0.199	0.216254	0.3867	0.1111	0.2983	0.0295	0.3436	0.37	0.12	0.31	0.04	0.342	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.274674	NA	NA	0.393614	0.087924	NA	0.225	NA	2.877686
1364	4	48172218	48172218	C	T	intronic	TEC	NA	NA	NA	intronic	ENSG00000135605	NA	NA	NA	NA	NA	4p12	NA	NA	NA	NA	rs2271174	0.52	0.52	0.525	0.520767	0.3579	0.8929	0.4942	0.3381	0.5706	0.36	0.92	0.45	0.36	0.4222	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.105305	NA	NA	0.342577	0.332122	NA	0.449	NA	2.877323
1364	6	29069337	29069337	A	T	intergenic	OR2B3,OR2J3	dist=14247;dist=10331	NA	NA	exonic	ENSG00000204702	NA	synonymous SNV	ENSG00000204702:ENST00000377171:exon1:c.A618T:p.I206I	NA	NA	6p22.1	NA	NA	NA	NA	rs2394518	0.72	0.72	0.71	0.71246	0.8191	0.6071	0.7161	0.6475	0.7965	0.85	0.59	0.71	0.67	0.8038	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.34742	NA	NA	NA	NA	NA	0.754	NA	2.8771
1364	1	207504669	207504669	G	A	intronic	CD55	NA	NA	NA	intronic	ENSG00000196352	NA	NA	NA	NA	NA	1q32.2	NA	Name=Pol2	NA	NA	rs2184476	0.66	0.66	0.665	0.621406	0.7435	0.4107	0.7032	0.6967	0.5532	0.74	0.47	0.7	0.71	0.6672	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.110825	2.110825	NA	0.712326	0.686337	NA	0.754	NA	2.876974
1364	X	1464184	1464184	G	T	intronic	IL3RA	NA	NA	NA	intronic	ENSG00000185291	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs17884006	0.59	0.59	0.63672	NA	NA	NA	NA	NA	NA	0.55	0.48	0.57	0.79	0.5715	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.871478	NA	NA	0.551676	0.740227	NA	0.551	NA	2.876824
1364	19	4355054	4355054	A	G	intronic	MPND	NA	NA	NA	intronic	ENSG00000008382	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs2041773	0.62	0.62	0.58	0.652157	0.5437	0.7718	0.7233	0.6475	0.5961	0.52	0.74	0.67	0.6	0.5797	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.35818	1.35818	NA	NA	NA	NA	0.572	NA	2.8766
1364	6	2838248	2838248	G	A	intronic	SERPINB1	NA	NA	NA	intronic	ENSG00000021355	NA	NA	NA	NA	NA	6p25.2	NA	Name=Pol2	NA	NA	rs316341	0.7	0.7	0.664	0.723043	0.7117	0.7431	0.7968	0.6611	0.7454	0.7	0.73	0.77	0.61	0.7072	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.026845	NA	NA	0.704884	0.673706	NA	0.696	NA	2.876216
1364	11	107431637	107431637	C	A	intronic	ALKBH8	NA	NA	NA	intronic	ENSG00000137760	NA	NA	NA	NA	NA	11q22.3	NA	NA	NA	NA	rs662349	0.43	0.43	0.386	0.440296	0.3757	0.4097	0.3703	0.5688	0.4141	0.38	0.4	0.36	0.57	0.3889	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.354115	NA	NA	0.35947	0.510227	NA	0.464	NA	2.87593
1364	8	87060672	87060672	A	G	downstream	PSKH2	NA	NA	NA	UTR3	ENSG00000147613	ENST00000276616:c.*19T>C	NA	NA	NA	NA	8q21.3	NA	NA	NA	NA	rs3802225	0.42	0.42	0.418	0.401158	0.3767	0.4583	0.3329	0.4402	0.363	0.37	0.49	0.35	0.46	0.3845	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.903451	NA	NA	0.362907	0.416478	NA	0.449	NA	2.875893
1364	17	6330153	6330153	C	T	intronic	AIPL1	NA	NA	NA	intronic	ENSG00000129221	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs925616	0.39	0.39	0.413	0.356629	0.3936	0.4812	0.2954	0.3109	0.2955	0.39	0.5	0.29	0.34	0.3615	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.163545	NA	NA	0.369186	0.35202	NA	0.326	NA	2.875714
1364	17	52555614	52555614	A	G	intergenic	KIF2B,TOM1L1	dist=653041;dist=422438	NA	NA	downstream	ENSG00000261965	NA	NA	NA	NA	NA	17q22	NA	NA	NA	NA	rs8076696	0.67	0.67	0.644	0.70607	0.6243	0.7688	0.6182	0.6861	0.8149	0.62	0.75	0.64	0.66	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.876983	NA	NA	NA	NA	NA	0.558	NA	2.8757
1364	3	14949268	14949268	C	T	intronic	FGD5	NA	NA	NA	intronic	ENSG00000154783	NA	NA	NA	NA	NA	3p25.1	Score=925;Name=V$LMO2COM_02	NA	NA	NA	rs9818644	0.67	0.67	0.672	0.680312	0.7068	0.5923	0.683	0.7708	0.6196	0.7	0.55	0.69	0.74	0.6921	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.495225	NA	NA	0.725635	0.774783	NA	0.674	NA	2.875465
1364	14	81259078	81259078	G	A	intronic	CEP128	NA	NA	NA	intronic	ENSG00000100629	NA	NA	NA	NA	NA	14q31.1	NA	NA	NA	NA	rs4523859	0.3	0.3	0.261	0.283946	0.3777	0.3333	0.3429	0.1188	0.318	0.38	0.32	0.36	0.1	0.3544	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.792674	NA	NA	0.392791	0.15025	NA	0.196	NA	2.875109
1364	18	6896450	6896450	C	T	intronic	ARHGAP28	NA	NA	NA	intronic	ENSG00000088756	NA	NA	NA	NA	NA	18p11.31	NA	NA	NA	NA	rs11081282	0.59	0.59	0.596	NA	NA	NA	NA	NA	NA	0.55	0.68	0.56	0.57	0.5629	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.148211	NA	NA	0.562093	0.58443	NA	0.572	NA	2.875007
1365	10	100152373	100152373	T	G	intronic	PYROXD2	NA	NA	NA	intronic	ENSG00000119943	NA	NA	NA	NA	NA	10q24.2	NA	NA	NA	NA	rs6584192	0.47	0.47	0.46	0.510383	0.334	0.5615	0.4741	0.6021	0.5409	0.34	0.57	0.45	0.58	0.4376	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.334707	NA	NA	0.354302	0.552202	NA	0.384	NA	2.874098
1365	11	117059552	117059552	G	A	intronic	SIDT2	NA	NA	NA	intronic	ENSG00000149577	NA	NA	NA	NA	NA	11q23.3	Score=756;Name=V$BRACH_01	NA	NA	NA	rs474339	0.54	0.54	0.51	0.478235	0.7306	0.373	0.6311	0.3396	0.4059	0.73	0.37	0.67	0.35	0.6377	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.239807	NA	NA	0.757914	0.421854	NA	0.565	NA	2.873786
1365	19	49621592	49621592	G	C	intronic	LIN7B	NA	NA	NA	intronic	ENSG00000104863	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs1060967	0.35	0.35	0.324	0.366414	0.3638	0.2054	0.3818	0.4501	0.411	0.36	0.21	0.42	0.43	0.3796	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.905189	NA	NA	0.383605	0.437131	NA	0.326	NA	2.872995
1365	10	101655982	101655982	G	A	intronic	DNMBP	NA	NA	NA	intronic	ENSG00000107554	NA	NA	NA	NA	NA	10q24.2	NA	NA	NA	NA	rs3740058	0.28	0.28	0.251	0.274561	0.3946	0.2183	0.3256	0.1589	0.3292	0.38	0.22	0.36	0.13	0.3493	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.951804	2.951804	NA	0.383488	0.200409	NA	0.312	NA	2.872612
1365	16	8996377	8996377	C	T	intronic	USP7	NA	NA	NA	intronic	ENSG00000187555	NA	NA	NA	NA	NA	16p13.2	NA	NA	NA	NA	rs2447918	0.35	0.35	0.305	0.341653	0.3728	0.2569	0.4049	0.3162	0.3865	0.38	0.26	0.46	0.34	0.379	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.434556	NA	NA	0.375814	0.292255	NA	0.37	NA	2.872386
1365	12	120791042	120791042	G	A	intronic	MSI1	NA	NA	NA	intronic	ENSG00000135097	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs1007469	0.46	0.46	0.454	0.467252	0.5746	0.4722	0.6441	0.1551	0.6483	0.57	0.47	0.62	0.18	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.481041	1.481041	NA	0.553111	0.20737	NA	0.399	NA	2.872289
1365	11	72296039	72296039	G	T	intronic	PDE2A	NA	NA	NA	ncRNA_exonic	ENSG00000256633	NA	NA	NA	NA	NA	11q13.4	NA	NA	NA	NA	rs907850	0.33	0.33	0.309	0.313898	0.5099	0.245	0.3184	0.1664	0.3793	0.49	0.22	0.37	0.18	0.4287	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.222972	NA	NA	0.522595	0.245	NA	0.348	NA	2.8721383
1365	12	57627717	57627717	G	A	intronic	SHMT2	NA	NA	NA	intronic	ENSG00000182199	NA	NA	NA	NA	NA	12q13.3	NA	NA	NA	NA	rs34095989	0.32	0.32	0.334	0.278155	0.4016	0.256	0.281	0.1498	0.3456	0.41	0.34	0.33	0.16	0.3314	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.532301	NA	NA	0.395	0.193827	NA	0.348	NA	2.872
1365	11	1159150	1159150	A	T	intergenic	MUC2,MUC5B	dist=54733;dist=85145	NA	NA	intronic	ENSG00000215182	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs28542750	0.87	0.87	0.877	0.891174	0.7952	0.997	0.9035	0.8389	0.9427	0.8	0.99	0.88	0.84	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.326197	NA	NA	NA	NA	NA	0.855	NA	2.8714667
1365	14	22580570	22580570	C	G	intergenic	OR4E2,DAD1	dist=446332;dist=453237	NA	NA	intronic	ENSG00000211806	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs1040301	0.76	0.76	0.734	0.748602	0.7952	0.7252	0.8458	0.708	0.7106	0.79	0.75	0.84	0.68	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.042213	NA	NA	NA	NA	NA	0.754	NA	2.8714667
1365	3	119912297	119912297	C	A	intronic	GPR156	NA	NA	NA	intronic	ENSG00000175697	NA	NA	NA	NA	NA	3q13.33	NA	NA	NA	NA	rs902793	0.38	0.38	0.381	0.383387	0.3867	0.3204	0.2637	0.4947	0.3793	0.38	0.33	0.28	0.49	0.3608	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.079255	NA	NA	0.381395	0.462551	NA	0.428	NA	2.871105
1365	20	31608250	31608250	C	A	intronic	BPIFB2	NA	NA	NA	intronic	ENSG00000078898	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs6057703	0.42	0.42	0.445	0.452276	0.3917	0.1756	0.3948	0.8064	0.362	0.39	0.17	0.39	0.77	0.3874	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.522606	NA	NA	0.35	0.725601	ID=COSN166518;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.572	NA	2.8709
1365	7	100373271	100373271	G	T	intronic	ZAN	NA	NA	NA	intronic	ENSG00000146839	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs540330	0.47	0.47	0.435	0.445088	0.3419	0.7867	0.5418	0.2126	0.4448	0.35	0.82	0.52	0.21	0.4247	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.524614	NA	NA	0.36275	0.225335	NA	0.297	NA	2.87065
1365	18	10539739	10539739	A	G	intronic	NAPG	NA	NA	NA	intronic	ENSG00000134265	NA	NA	NA	NA	NA	18p11.22	NA	NA	NA	NA	rs640832	0.5	0.5	0.548	0.502995	0.3956	0.4663	0.3991	0.8033	0.319	0.39	0.49	0.42	0.75	0.3842	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.199616	NA	NA	0.349562	0.716941	NA	0.464	NA	2.870638
1365	8	85441856	85441856	T	A	intronic	RALYL	NA	NA	NA	intronic	ENSG00000184672	NA	NA	NA	NA	NA	8q21.2	NA	NA	NA	NA	rs13248532	0.35	0.35	0.352	0.370807	0.3588	0.3175	0.379	0.3064	0.5194	0.36	0.33	0.34	0.36	0.3882	0.38	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.155781	NA	NA	0.382531	0.305103	NA	0.355	NA	2.870469
1365	16	84493032	84493032	C	T	intronic	ATP2C2	NA	NA	NA	ncRNA_exonic	ENSG00000261286	NA	NA	NA	NA	NA	16q24.1	NA	NA	NA	NA	rs3743654	0.56	0.56	0.529	0.558506	0.4632	0.6984	0.5591	0.4584	0.6472	0.46	0.73	0.53	0.52	0.5167	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.413582	NA	NA	0.483104	0.437725	NA	0.5	NA	2.8703293
1365	13	110862268	110862268	A	C	intronic	COL4A1	NA	NA	NA	intronic	ENSG00000187498	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs2166207	0.39	0.39	0.403	0.379992	0.3787	0.2302	0.4784	0.5227	0.273	0.39	0.24	0.43	0.56	0.3761	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.030127	NA	NA	0.37555	0.485549	NA	0.471	NA	2.86965
1365	7	130027633	130027633	A	G	intronic	CPA1	NA	NA	NA	intronic	ENSG00000091704	NA	NA	NA	NA	NA	7q32.2	NA	NA	NA	NA	rs10263705	0.42	0.42	0.409	0.416334	0.3907	0.4107	0.4597	0.5076	0.2945	0.38	0.4	0.46	0.47	0.3868	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.000757	2.000757	NA	0.353023	0.496823	NA	0.341	NA	2.869477
1365	19	5047691	5047691	G	A	intronic	KDM4B	NA	NA	NA	intronic	ENSG00000127663	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs2620818	0.26	0.26	0.249	0.271765	0.4056	0.0565	0.3386	0.2723	0.3078	0.38	0.05	0.3	0.29	0.3298	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.547541	NA	NA	0.395581	0.255561	NA	0.341	NA	2.869019
1365	12	48375965	48375965	C	T	intronic	COL2A1	NA	NA	NA	intronic	ENSG00000139219	NA	NA	NA	NA	NA	12q13.11	NA	NA	NA	NA	rs2276457	0.43	0.43	0.412	0.446286	0.3757	0.5556	0.3473	0.4395	0.4857	0.37	0.57	0.35	0.4	0.377	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.552722	NA	NA	0.378605	0.412165	NA	0.428	NA	2.868695
1365	10	99422648	99422648	A	G	intronic	PI4K2A	NA	NA	NA	intronic	ENSG00000155252,ENSG00000249967	NA	NA	NA	NA	NA	10q24.2	NA	NA	NA	NA	rs7905087	0.37	0.37	0.385	0.406949	0.3539	0.3343	0.304	0.4985	0.4857	0.35	0.31	0.29	0.52	0.3864	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.676037	NA	NA	0.391047	0.478665	ID=COSN163728;OCCURENCE=1(breast)	0.457	NA	2.868653
1365	19	4355035	4355035	A	G	intronic	MPND	NA	NA	NA	intronic	ENSG00000008382	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs2041772	0.66	0.66	0.464	0.688099	0.5437	0.7708	0.7363	0.7693	0.6074	0.53	0.74	0.68	0.75	0.5879	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.856125	NA	NA	NA	NA	NA	0.63	NA	2.8684
1365	3	52551284	52551284	G	T	intronic	STAB1	NA	NA	NA	intronic	ENSG00000010327	NA	NA	NA	NA	NA	3p21.1	NA	NA	NA	NA	rs67409736	0.61	0.61	0.611	0.58127	0.5656	0.621	0.6556	0.6997	0.3436	0.56	0.62	0.65	0.63	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.512631	NA	NA	0.567477	0.649201	NA	0.543	NA	2.866923
1365	18	23866482	23866482	C	T	intronic	TAF4B	NA	NA	NA	intronic	ENSG00000141384	NA	NA	NA	NA	NA	18q11.2	NA	NA	NA	NA	rs8089000	0.35	0.35	0.371	0.333666	0.4066	0.1895	0.2867	0.5106	0.2014	0.42	0.17	0.28	0.51	0.3481	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.138651	2.138651	NA	0.378436	0.474581	NA	0.406	NA	2.866864
1365	4	122257950	122257950	A	G	intronic	QRFPR	NA	NA	NA	intronic	ENSG00000186867	NA	NA	NA	NA	NA	4q27	NA	NA	NA	NA	rs2302309	0.33	0.33	0.314	0.276358	0.4016	0.2688	0.3213	0.1899	0.2403	0.41	0.29	0.35	0.23	0.3521	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.243024	NA	NA	0.379651	0.215161	ID=COSN167322;OCCURENCE=1(large_intestine)	0.304	NA	2.866649
1365	3	122843212	122843212	C	T	intronic	PDIA5	NA	NA	NA	intronic	ENSG00000065485	NA	NA	NA	NA	NA	3q21.1	NA	NA	NA	NA	rs2305051	0.47	0.47	0.456	NA	NA	NA	NA	NA	NA	0.57	0.41	0.6	0.3	0.5506	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.563451	NA	NA	0.583256	0.364503	NA	0.558	NA	2.866144
1365	7	121960438	121960438	C	T	intronic	CADPS2	NA	NA	NA	intronic	ENSG00000081803	NA	NA	NA	NA	NA	7q31.32	NA	NA	NA	NA	rs1443749	0.37	0.37	0.352	0.374002	0.3648	0.4623	0.4294	0.2617	0.4049	0.37	0.45	0.38	0.25	0.3885	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.299443	NA	NA	0.381005	0.276994	NA	0.348	NA	2.865695
1365	9	37302155	37302155	C	T	intronic	ZCCHC7	NA	NA	NA	intronic	ENSG00000147905	NA	NA	NA	NA	NA	9p13.2	NA	NA	NA	NA	rs10814518	0.28	0.28	0.258	0.26278	0.3718	0.2183	0.3112	0.1263	0.3466	0.38	0.2	0.35	0.19	0.3509	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.329348	NA	NA	0.411874	0.160763	ID=COSN168542;OCCURENCE=1(large_intestine)	0.29	NA	2.865426
1366	7	134880884	134880884	G	C	intronic	WDR91	NA	NA	NA	intronic	ENSG00000105875	NA	NA	NA	NA	NA	7q33	NA	NA	Name=3	NA	rs292578	0.65	0.65	0.635	0.654553	0.7028	0.6131	0.8026	0.497	0.7556	0.71	0.59	0.8	0.53	0.7096	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.472072	3.472072	NA	0.722674	0.55084	NA	0.703	NA	2.864926
1366	18	12246495	12246495	C	G	intergenic	C18orf61,CIDEA	dist=21786;dist=7823	NA	NA	upstream	ENSG00000267663	NA	NA	NA	NA	NA	18p11.21	NA	NA	NA	NA	rs4796954	0.57	0.57	0.575	0.544129	0.6352	0.7411	0.4697	0.2927	0.6401	0.64	0.77	0.48	0.28	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.850596	NA	NA	NA	NA	NA	0.522	NA	2.8648
1366	11	12315407	12315407	G	C	exonic	MICALCL	NA	synonymous SNV	MICALCL:NM_032867:exon3:c.G429C:p.G143G	exonic	ENSG00000133808	NA	synonymous SNV	ENSG00000133808:ENST00000256186:exon3:c.G429C:p.G143G	NA	NA	11p15.3	NA	NA	NA	NA	rs10741579	0.94	0.94	0.939	0.921725	0.9463	0.9415	0.951	0.9191	0.8589	0.95	0.95	0.94	0.92	0.9265	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.016838	NA	NA	0.929282	0.926251	NA	0.964	NA	2.8645846
1366	3	8669361	8669361	C	A	intronic	SSUH2	NA	NA	NA	UTR3	ENSG00000125046	ENST00000455157:c.*1131G>T	NA	NA	NA	NA	3p26.1	NA	NA	NA	NA	rs1533001	0.48	0.48	0.504	0.460064	0.4145	0.6458	0.3588	0.413	0.4509	0.42	0.68	0.33	0.43	0.4895	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.296182	NA	NA	0.398372	0.406037	NA	0.413	NA	2.8642947
1366	7	142139259	142139259	G	A	intergenic	LOC730441,MTRNR2L6	dist=167191;dist=234872	NA	NA	downstream	ENSG00000211727	NA	NA	NA	NA	NA	7q34	Score=699;Name=V$PPARG_02	NA	NA	NA	rs361374	0.53	0.53	0.486	0.534744	0.5527	0.7659	0.5101	0.3359	0.5644	0.53	0.74	0.46	0.34	0.5369	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.565463	NA	NA	0.546172	0.354608	NA	0.464	NA	2.864228
1366	22	50724190	50724190	G	T	intronic	PLXNB2	NA	NA	NA	intronic	ENSG00000196576	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs28604596	0.63	0.63	0.6	0.616813	0.6491	0.4841	0.5648	0.6815	0.6697	0.68	0.52	0.59	0.73	0.487	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.12536	NA	NA	NA	NA	NA	0.007	NA	2.8639
1366	9	5805001	5805001	A	G	intronic	ERMP1	NA	NA	NA	intronic	ENSG00000099219	NA	NA	NA	NA	NA	9p24.1	NA	NA	NA	NA	rs10975289	0.42	0.42	0.383	0.408347	0.341	0.7282	0.4323	0.1286	0.5092	0.36	0.76	0.44	0.12	0.4439	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.952982	NA	NA	0.351361	0.14276	NA	0.37	NA	2.863739
1366	1	28206588	28206588	T	C	intronic	THEMIS2	NA	NA	NA	intronic	ENSG00000130775	NA	NA	NA	NA	NA	1p35.3	NA	NA	NA	NA	rs12568383	0.3	0.3	0.263	0.273962	0.3797	0.3919	0.2608	0.0658	0.3344	0.39	0.38	0.3	0.09	0.3673	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.350835	NA	NA	0.389651	0.11212	NA	0.21	NA	2.863349
1366	17	19643810	19643810	G	A	intronic	ALDH3A1	NA	NA	NA	intronic	ENSG00000108602	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs3826507	0.32	0.32	0.3	0.294129	0.3917	0.3274	0.3919	0.0802	0.3793	0.4	0.35	0.38	0.1	0.3562	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.050151	NA	NA	0.388953	0.118021	NA	0.29	NA	2.863147
1366	16	31384554	31384554	T	C	intronic	ITGAX	NA	NA	NA	intronic	ENSG00000140678	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs2070896	0.45	0.45	0.435	0.432508	0.3807	0.6458	0.4207	0.3132	0.4356	0.37	0.67	0.41	0.33	0.4015	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.055466	NA	NA	0.355581	0.325899	NA	0.377	NA	2.862219
1366	7	121960407	121960407	T	G	intronic	CADPS2	NA	NA	NA	intronic	ENSG00000081803	NA	NA	NA	NA	NA	7q31.32	NA	NA	NA	NA	rs1348442	0.37	0.37	0.349	0.375399	0.3658	0.4643	0.4294	0.2632	0.407	0.37	0.45	0.38	0.26	0.3906	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.099346	NA	NA	0.381499	0.277027	NA	0.384	NA	2.862101
1366	12	125509502	125509502	C	T	intronic	BRI3BP	NA	NA	NA	intronic	ENSG00000184992	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs7303493	0.43	0.43	0.45	0.466054	0.326	0.4048	0.4769	0.6339	0.4387	0.32	0.38	0.49	0.62	0.4167	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.479122	NA	NA	0.395441	0.606849	NA	0.572	NA	2.861859
1366	10	95346938	95346938	G	A	intronic	FFAR4	NA	NA	NA	intronic	ENSG00000186188	NA	NA	NA	NA	NA	10q23.33	NA	NA	NA	NA	rs11187539	0.37	0.37	0.366	0.384385	0.3807	0.1042	0.2839	0.6286	0.4182	0.38	0.11	0.33	0.68	0.3694	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.736862	NA	NA	0.388256	0.591322	NA	0.551	NA	2.861644
1366	2	36806021	36806021	G	A	intronic	FEZ2	NA	NA	NA	intronic	ENSG00000171055	NA	NA	NA	NA	NA	2p22.2	NA	NA	NA	NA	rs2072534	0.48	0.48	0.508	0.472045	0.3956	0.6468	0.3357	0.5741	0.3292	0.4	0.62	0.32	0.58	0.3881	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.689097	NA	NA	0.354721	0.522336	ID=COSN166062;OCCURENCE=1(breast)	0.551	NA	2.861579
1366	16	4254523	4254523	C	T	intronic	SRL	NA	NA	NA	intronic	ENSG00000185739	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs60137128	0.29	0.29	0.261	0.27496	0.4006	0.2411	0.2997	0.1846	0.2853	0.4	0.19	0.3	0.23	0.3462	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.869639	NA	NA	0.391813	0.214739	NA	0.319	NA	2.861387
1366	4	122261785	122261785	C	T	intronic	QRFPR	NA	NA	NA	intronic	ENSG00000186867	NA	NA	NA	NA	NA	4q27	NA	NA	NA	NA	rs2276955	0.33	0.33	0.302	0.276757	0.4026	0.2688	0.3213	0.1906	0.2403	0.41	0.29	0.35	0.23	0.3572	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.688073	NA	NA	0.37907	0.214934	NA	0.304	NA	2.86113
1366	19	49519793	49519793	A	G	intronic	LHB	NA	NA	NA	intronic	ENSG00000104826	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs2387588	0.48	0.48	0.143	0.571086	0.5825	0.3313	0.621	0.7345	0.5501	0.51	0.3	0.54	0.62	0.5573	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.736774	NA	NA	NA	NA	NA	0.471	NA	2.8602
1366	2	170668813	170668813	C	T	intronic	METTL5	NA	NA	NA	UTR3	ENSG00000138382	ENST00000410097:c.*10G>A	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	rs3731674	0.51	0.51	0.473	0.50599	0.6769	0.4474	0.6916	0.3374	0.4867	0.64	0.46	0.64	0.28	0.6298	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.71257	NA	NA	NA	NA	NA	0.551	NA	2.8599667
1366	12	121615283	121615283	T	C	intronic	P2RX7	NA	NA	NA	intronic	ENSG00000089041	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs1653598	0.31	0.31	0.329	0.322684	0.3837	0.1419	0.2003	0.4592	0.3487	0.39	0.13	0.21	0.47	0.3586	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.544863	NA	NA	0.397791	0.455969	NA	0.413	NA	2.859909
1366	16	81062157	81062157	T	C	intronic	CENPN	NA	NA	NA	ncRNA_intronic	ENSG00000260213	NA	NA	NA	NA	NA	16q23.2	NA	NA	NA	NA	rs114305409	NA	NA	NA	0.607428	0.7594	0.5397	0.6369	0.3775	0.8108	NA	NA	NA	NA	0.7141	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.162798	NA	NA	NA	NA	NA	NA	NA	2.8598333
1366	6	29874719	29874719	G	T	intergenic	HLA-H,HCG4B	dist=15863;dist=17650	NA	NA	downstream	ENSG00000233677,ENSG00000235963	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs9259609	0.62	0.62	0.639	0.631589	0.6402	0.5556	0.6801	0.6793	0.6022	0.63	0.53	0.61	0.73	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.710106	NA	NA	NA	NA	NA	0.623	NA	2.8598
1366	18	34297753	34297753	C	T	intronic	FHOD3	NA	NA	NA	intronic	ENSG00000134775	NA	NA	NA	NA	NA	18q12.2	NA	NA	NA	NA	rs3809994	0.38	0.38	0.378	0.419329	0.3479	0.4355	0.4813	0.3495	0.5266	0.34	0.45	0.44	0.34	0.3991	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.265764	NA	NA	0.393256	0.35951	NA	0.37	NA	2.859744
1366	15	57138501	57138501	G	A	intergenic	ZNF280D,LOC145783	dist=112714;dist=39867	NA	NA	intronic	ENSG00000137871	NA	NA	NA	NA	NA	15q21.3	NA	NA	NA	NA	rs1647385	0.56	0.56	0.532	0.51258	0.8072	0.5139	0.5461	0.1649	0.6544	0.83	0.49	0.58	0.19	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.49638	NA	NA	NA	NA	NA	0.471	NA	2.8594667
1366	10	42644664	42644664	A	C	intergenic	NONE,LOC441666	dist=NONE;dist=182650	NA	NA	downstream	ENSG00000229485	NA	NA	NA	NA	NA	10q11.21	NA	NA	NA	NA	rs10793629	NA	NA	0.788	0.65595	0.6421	0.6052	0.5994	0.7277	0.6656	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.579205	NA	NA	NA	NA	NA	NA	NA	2.8579
1366	13	37014366	37014366	G	A	intronic	CCNA1	NA	NA	NA	intronic	ENSG00000133101	NA	NA	NA	NA	NA	13q13.3	NA	NA	NA	NA	rs2282411	0.35	0.35	0.306	0.339058	0.3738	0.4782	0.4856	0.1286	0.3405	0.38	0.45	0.47	0.12	0.3805	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.043528	NA	NA	0.387997	0.165002	NA	0.283	NA	2.857703
1366	14	106307418	106307418	G	A	intergenic	ELK2AP,KIAA0125	dist=168274;dist=76420	NA	NA	exonic	ENSG00000211898	NA	unknown	UNKNOWN	NA	NA	14q32.33	NA	Name=Pol2,ERalpha_a	NA	NA	rs2753492	0.67	0.67	0.67	0.650759	0.8062	0.502	0.804	0.6377	0.5532	0.79	0.46	0.79	0.67	0.7304	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.334866	NA	NA	0.772716	0.64743	NA	0.558	NA	2.8573507
1366	9	141030078	141030078	G	A	intergenic	CACNA1B,TUBBP5	dist=11002;dist=14487	NA	NA	intergenic	ENSG00000148408,ENSG00000229926	dist=11002;dist=1469	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs11137380	0.33	0.33	0.272	0.319289	0.4761	0.2996	0.5447	0.0446	0.3896	0.48	0.26	0.49	0.07	NA	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.572122	NA	NA	NA	NA	NA	0.246	NA	2.8572334
1366	14	102891646	102891646	A	G	intronic	TECPR2	NA	NA	NA	intronic	ENSG00000196663	NA	NA	NA	NA	NA	14q32.31	NA	NA	NA	NA	rs4906197	0.29	0.29	0.302	0.305511	0.3787	0.2044	0.2478	0.3169	0.3599	0.37	0.2	0.27	0.29	0.3627	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.257406	NA	NA	0.401395	0.307762	NA	0.348	NA	2.857205
1366	16	30093779	30093779	C	G	intronic	PPP4C	NA	NA	NA	intronic	ENSG00000149923	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs2278557	0.32	0.32	0.315	0.32528	0.3827	0.3641	0.2983	0.1641	0.4632	0.38	0.36	0.32	0.16	0.3663	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2617	NA	NA	0.393837	0.171598	NA	0.312	NA	2.857163
1366	8	74204653	74204653	A	T	intronic	RPL7	NA	NA	NA	intronic	ENSG00000147604	NA	NA	NA	NA	NA	8q21.11	NA	NA	NA	NA	rs2070764	0.44	0.44	0.397	0.486621	0.3618	0.5288	0.4957	0.447	0.6186	0.35	0.51	0.48	0.46	0.4316	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.266599	NA	NA	0.3496	0.403918	NA	0.609	NA	2.857
1366	14	50619927	50619927	A	G	intronic	SOS2	NA	NA	NA	intronic	ENSG00000100485	NA	NA	NA	NA	NA	14q21.3	NA	NA	NA	NA	rs11628935	0.27	0.27	0.279	0.247204	0.4076	0.2192	0.2478	0.0915	0.3211	0.41	0.2	0.28	0.13	0.3359	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.774116	NA	NA	0.399534	0.145388	NA	0.239	NA	2.856966
1366	19	17892591	17892591	A	G	exonic	FCHO1	NA	synonymous SNV	FCHO1:NM_001161359:exon21:c.A1749G:p.T583T,FCHO1:NM_001161358:exon22:c.A1899G:p.T633T,FCHO1:NM_001161357:exon23:c.A1899G:p.T633T,FCHO1:NM_015122:exon23:c.A1899G:p.T633T	exonic	ENSG00000130475	NA	synonymous SNV	ENSG00000130475:ENST00000597512:exon19:c.A1920G:p.T640T,ENSG00000130475:ENST00000252771:exon21:c.A1899G:p.T633T,ENSG00000130475:ENST00000389133:exon21:c.A1899G:p.T633T,ENSG00000130475:ENST00000595033:exon21:c.A1749G:p.T583T,ENSG00000130475:ENST00000596951:exon21:c.A1899G:p.T633T,ENSG00000130475:ENST00000539407:exon22:c.A1899G:p.T633T,ENSG00000130475:ENST00000600676:exon22:c.A1899G:p.T633T,ENSG00000130475:ENST00000594202:exon23:c.A1899G:p.T633T,ENSG00000130475:ENST00000596536:exon23:c.A1899G:p.T633T	NA	NA	19p13.11	NA	NA	NA	NA	rs2042298	0.87	0.87	0.855	0.85643	0.9543	0.8264	0.8934	0.7489	0.9059	0.96	0.83	0.9	0.77	0.911	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.097046	NA	NA	0.944535	0.789605	NA	0.884	NA	2.8568316
1366	15	41865488	41865488	C	T	intronic	TYRO3	NA	NA	NA	intronic	ENSG00000092445	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs2246444	0.47	0.47	0.457	0.446685	0.3499	0.7837	0.3689	0.4024	0.3139	0.34	0.8	0.38	0.37	0.4163	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.927484	NA	NA	0.376977	0.414662	NA	0.5	NA	2.856823
1366	20	4162411	4162411	T	C	intronic	SMOX	NA	NA	NA	intronic	ENSG00000088826	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs1124983	0.34	0.34	0.323	0.293131	0.3688	0.1905	0.3703	0.4017	0.1196	0.39	0.15	0.38	0.44	0.3685	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.259378	3.259378	NA	0.40593	0.415343	NA	0.312	NA	2.85677
1366	3	101404813	101404813	A	G	intronic	RPL24	NA	NA	NA	intronic	ENSG00000114391	NA	NA	NA	NA	NA	3q12.3	NA	NA	NA	NA	rs2303473	0.34	0.34	0.307	0.338259	0.4016	0.3651	0.3948	0.1808	0.4182	0.42	0.35	0.38	0.18	0.3669	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.767181	NA	NA	0.375116	0.208447	NA	0.312	NA	2.856384
1366	1	177199323	177199323	C	T	intronic	FAM5B	NA	NA	NA	intronic	ENSG00000198797	NA	NA	NA	NA	NA	1q25.2	NA	NA	NA	NA	rs3176442	0.4	0.4	0.37	0.397564	0.3757	0.5298	0.4135	0.2133	0.5215	0.38	0.56	0.39	0.24	0.4027	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.653168	NA	NA	0.365237	0.237671	NA	0.348	NA	2.856363
1366	16	78198192	78198192	T	C	intronic	WWOX	NA	NA	NA	intronic	ENSG00000186153	NA	NA	NA	NA	NA	16q23.1	NA	NA	Name=20	NA	rs2303191	0.79	0.79	0.796	0.789137	0.6809	0.9087	0.8127	0.8003	0.7454	0.69	0.91	0.8	0.78	0.7482	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.049121	NA	NA	0.715165	0.804145	NA	0.79	NA	2.855735
1366	3	11300707	11300707	T	C	UTR5	HRH1	NM_001098213:c.-17T>C,NM_001098212:c.-17T>C,NM_001098211:c.-17T>C,NM_000861:c.-17T>C	NA	NA	UTR5	ENSG00000196639	ENST00000438284:c.-17T>C,ENST00000431010:c.-17T>C,ENST00000413416:c.-17T>C,ENST00000397056:c.-17T>C	NA	NA	NA	NA	3p25.3	NA	Name=CTCF	NA	NA	rs901865	0.82	0.82	0.795	0.823083	0.8091	0.9117	0.8674	0.6664	0.9264	0.83	0.92	0.85	0.68	0.8426	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.505345	NA	NA	0.82593	0.685429	NA	0.87	NA	2.8557034
1366	18	50832102	50832102	A	G	intronic	DCC	NA	NA	NA	intronic	ENSG00000187323	NA	NA	NA	NA	NA	18q21.2	NA	NA	NA	NA	rs1431196	0.2	0.2	0.181	0.161741	0.3996	0.0337	0.2277	0.0431	0.1626	0.41	0.03	0.27	0.04	0.3183	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.206744	NA	NA	0.426512	0.112347	NA	0.188	NA	2.855588
1367	7	94146975	94146975	T	G	intronic	CASD1	NA	NA	NA	intronic	ENSG00000127995	NA	NA	NA	NA	NA	7q21.3	NA	NA	NA	NA	rs2301646	0.3	0.3	0.278	0.30651	0.3897	0.3353	0.3386	0.0666	0.4928	0.39	0.31	0.35	0.11	0.3709	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.123124	2.123124	NA	0.384767	0.120517	ID=COSM150328;OCCURENCE=1(stomach)	0.435	NA	2.854633
1367	1	43901011	43901011	A	C	intronic	SZT2	NA	NA	NA	intronic	ENSG00000198198	NA	NA	NA	NA	NA	1p34.2	NA	NA	NA	NA	rs2039531	0.26	0.26	0.242	0.198882	0.4225	0.0823	0.379	0.1006	0.0941	0.42	0.08	0.41	0.13	0.32	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.216287	2.216287	NA	0.403372	0.139809	NA	0.333	NA	2.854128
1367	19	35420841	35420841	A	G	UTR5	ZNF30	NM_001099438:c.-11A>G,NM_001099437:c.-11A>G,NM_194325:c.-11A>G	NA	NA	UTR5	ENSG00000168661	ENST00000439785:c.-11A>G,ENST00000303586:c.-11A>G,ENST00000601957:c.-11A>G,ENST00000601142:c.-11A>G,ENST00000426813:c.-12724A>G	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs2546001	0.57	0.57	0.599	0.615815	0.4871	0.3919	0.4222	0.9705	0.637	0.49	0.4	0.47	0.96	0.536	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.29216	NA	NA	0.456285	0.879906	NA	0.601	NA	2.8539484
1367	2	29366830	29366830	A	G	intronic	CLIP4	NA	NA	NA	intronic	ENSG00000115295	NA	NA	NA	NA	NA	2p23.2	NA	NA	NA	NA	rs3213947	0.44	0.44	0.394	0.445088	0.3708	0.6865	0.5389	0.1929	0.547	0.37	0.67	0.5	0.22	0.4246	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.041577	NA	NA	0.352326	0.240808	NA	0.493	NA	2.852274
1367	1	246903654	246903654	G	C	intronic	SCCPDH	NA	NA	NA	intronic	ENSG00000143653	NA	NA	NA	NA	NA	1q44	NA	NA	NA	NA	rs3007322	0.27	0.27	0.237	0.261581	0.4016	0.2312	0.3314	0.0227	0.4223	0.4	0.25	0.36	0.04	0.35	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.143904	NA	NA	0.397674	0.075	ID=COSN163504;OCCURENCE=1(breast)	0.391	NA	2.850726
1367	2	20939708	20939708	C	T	intronic	C2orf43	NA	NA	NA	intronic	ENSG00000118961	NA	NA	NA	NA	NA	2p24.1	NA	NA	NA	NA	rs653347	0.42	0.42	0.272	0.4375	0.4573	0.501	0.4496	0.2254	0.6299	0.44	0.55	0.44	0.22	0.4504	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.824433	NA	NA	0.241628	0.236496	NA	0.109	NA	2.850672
1367	9	92003749	92003749	A	G	intronic	SEMA4D	NA	NA	NA	intronic	ENSG00000187764	NA	NA	NA	NA	NA	9q22.2	NA	NA	NA	NA	rs7465881	0.38	0.38	0.384	0.419529	0.3628	0.2004	0.4899	0.5719	0.4479	0.37	0.19	0.43	0.58	0.4026	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.913598	NA	NA	0.38407	0.532456	NA	0.457	NA	2.85053
1367	11	101868415	101868415	C	T	UTR3	KIAA1377	NM_020802:c.*41C>T	NA	NA	UTR3	ENSG00000110318	ENST00000263468:c.*41C>T,ENST00000532529:c.*2891C>T,ENST00000537689:c.*41C>T,ENST00000532077:c.*41C>T	NA	NA	NA	NA	11q22.1	NA	NA	NA	NA	rs1783742	0.6	0.6	0.6	0.577676	0.498	0.7639	0.4366	0.6377	0.4867	0.48	0.79	0.47	0.67	0.5031	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.340302	NA	NA	0.482554	0.639582	NA	0.565	NA	2.8496794
1367	5	168250350	168250350	C	G	intronic	SLIT3	NA	NA	NA	intronic	ENSG00000184347	NA	NA	NA	NA	NA	5q34	NA	NA	NA	NA	rs924875	0.49	0.49	0.529	0.515775	0.3728	0.4891	0.3775	0.8169	0.3814	0.38	0.46	0.4	0.79	0.4105	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.415009	NA	NA	0.367674	0.770313	ID=COSN167638;OCCURENCE=1(large_intestine)	0.536	NA	2.849026
1367	2	32481795	32481795	T	A	intronic	NLRC4	NA	NA	NA	intronic	ENSG00000091106	NA	NA	NA	NA	NA	2p22.3	NA	NA	NA	NA	rs59966205	0.54	0.54	NA	0.511981	0.6044	0.3552	0.5879	0.6021	0.4029	0.6	0.38	0.59	0.6	0.5466	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.401772	NA	NA	NA	NA	NA	NA	NA	2.849
1367	3	196443826	196443826	A	G	intronic	PIGX	NA	NA	NA	intronic	ENSG00000163964	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs1906045	0.46	0.46	0.424	0.45647	0.3549	0.5317	0.4236	0.4887	0.4632	0.37	0.58	0.41	0.49	0.4286	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.043163	NA	NA	0.367527	0.44119	NA	0.522	NA	2.848973
1367	12	2851603	2851603	G	A	intergenic	CACNA1C,LOC283440	dist=44488;dist=18763	NA	NA	downstream	ENSG00000256150	NA	NA	NA	NA	NA	12p13.33	NA	NA	NA	NA	rs4635140	0.61	0.61	0.558	0.612021	0.6511	0.755	0.7118	0.2322	0.8671	0.65	0.81	0.71	0.25	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.15765	NA	NA	NA	NA	NA	0.384	NA	2.8489
1367	19	6731304	6731304	G	A	intronic	GPR108	NA	NA	NA	intronic	ENSG00000125734	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs2279626	0.37	0.37	0.345	0.35004	0.3728	0.4534	0.3905	0.2746	0.2935	0.35	0.44	0.39	0.31	0.386	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.048969	NA	NA	0.392454	0.280584	NA	0.014	NA	2.848746
1367	19	17308734	17308734	T	G	intronic	MYO9B	NA	NA	NA	intronic	ENSG00000099331	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs3745160	0.75	0.75	0.721	0.759585	0.5666	0.749	0.804	0.969	0.6544	0.57	0.78	0.78	0.96	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.748388	NA	NA	0.584852	0.91474	NA	0.761	NA	2.848548
1367	12	112610714	112610714	G	A	intronic	HECTD4	NA	NA	NA	intronic	ENSG00000173064	NA	NA	NA	NA	NA	12q24.13	NA	NA	NA	NA	rs11066188	0.19	0.19	0.19	0.129593	0.4135	0.003	0.2147	0.0174	0.0593	0.42	0.01	0.25	0.02	0.2985	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.76921	NA	NA	0.440245	0.076505	NA	0.123	NA	2.847755
1367	21	43732425	43732425	C	T	intronic	TFF3	NA	NA	NA	intronic	ENSG00000160180	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs533093	0.23	0.23	0.2	0.220248	0.4215	0.0377	0.3559	0.0552	0.3282	0.39	0.05	0.36	0.08	0.3278	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.614465	NA	NA	0.403023	0.108488	NA	0.261	NA	2.847677
1367	1	182571277	182571277	C	T	intronic	RGS16	NA	NA	NA	intronic	ENSG00000143333	NA	NA	NA	NA	NA	1q25.3	NA	NA	NA	NA	rs569790	0.3	0.3	0.276	0.3127	0.3817	0.2381	0.4683	0.1278	0.4581	0.37	0.23	0.43	0.17	0.3728	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.698779	NA	NA	0.398256	0.172492	NA	0.268	NA	2.847244
1367	6	160575985	160575985	C	T	intronic	SLC22A1	NA	NA	NA	intronic	ENSG00000175003	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs2297374	0.39	0.39	0.401	0.391174	0.3767	0.3363	0.2723	0.5325	0.3558	0.39	0.31	0.3	0.53	0.3862	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.947313	NA	NA	0.389884	0.517476	ID=COSN167926;OCCURENCE=1(large_intestine)	0.326	NA	2.847216
1367	18	6950999	6950999	A	G	intronic	LAMA1	NA	NA	NA	intronic	ENSG00000101680	NA	NA	NA	NA	NA	18p11.31	NA	NA	NA	NA	rs62081480	0.26	0.26	0.219	0.225839	0.3897	0.2143	0.2248	0.0915	0.2515	0.4	0.23	0.27	0.09	0.3711	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.09456	NA	NA	0.393023	0.152973	NA	0.232	NA	2.846177
1367	12	31297871	31297871	G	C	intergenic	DDX11,FAM60A	dist=40146;dist=135649	NA	NA	ncRNA_exonic	ENSG00000177359	NA	NA	NA	Score=336;Name=lod=31	NA	12p11.21	NA	NA	NA	NA	rs12309295	0.65	0.65	0.61	0.625399	0.7266	0.6647	0.6614	0.5083	0.6135	0.74	0.66	0.67	0.48	0.6931	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.607354	NA	0.01	0.734451	0.513456	NA	0.442	NA	2.845849
1367	20	30914706	30914706	C	T	intronic	KIF3B	NA	NA	NA	intronic	ENSG00000101350	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs3746606	0.41	0.41	0.375	0.396765	0.3499	0.7431	0.4308	0.1241	0.4325	0.36	0.74	0.37	0.12	0.4208	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.464226	1.464226	NA	0.383605	0.164321	NA	0.196	NA	2.845695
1367	16	84494450	84494450	G	A	intronic	ATP2C2	NA	NA	NA	ncRNA_exonic	ENSG00000261286	NA	NA	NA	NA	NA	16q24.1	NA	NA	NA	NA	rs381467	0.4	0.4	0.378	0.390176	0.5308	0.2986	0.428	0.3722	0.3374	0.53	0.27	0.46	0.33	0.4658	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.366663	NA	NA	0.491105	0.373511	NA	0.457	NA	2.8456283
1367	11	92570813	92570813	C	A	intronic	FAT3	NA	NA	NA	intronic	ENSG00000165323	NA	NA	NA	NA	NA	11q14.3	NA	NA	NA	NA	rs11020076	0.34	0.34	0.353	0.385383	0.4085	0.4435	0.4179	0.298	0.3967	0.33	0.41	0.36	0.24	0.4041	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.86082	NA	NA	0.341883	0.257637	NA	NA	NA	2.845517
1367	22	47064665	47064665	C	T	intronic	GRAMD4	NA	NA	NA	intronic	ENSG00000075240	NA	NA	NA	NA	NA	22q13.31	NA	NA	NA	NA	rs9616088	0.31	0.31	0.278	0.285743	0.3956	0.3869	0.3818	0.0393	0.3333	0.38	0.38	0.42	0.04	0.3618	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.82937	NA	NA	0.397209	0.095098	NA	0.283	NA	2.845391
1367	20	13074243	13074243	T	A	intronic	SPTLC3	NA	NA	NA	intronic	ENSG00000172296	NA	NA	NA	NA	NA	20p12.1	NA	NA	NA	NA	rs1011290	0.35	0.35	0.339	0.333466	0.3956	0.2966	0.3919	0.3676	0.2198	0.39	0.31	0.34	0.36	0.3576	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.929264	NA	NA	0.401483	0.37074	NA	0.275	NA	2.845317
1368	12	126003934	126003934	T	C	intronic	TMEM132B	NA	NA	NA	intronic	ENSG00000139364	NA	NA	NA	NA	NA	12q24.32	NA	Name=MafK_(ab50322),MafK_(SC-477)	NA	NA	rs964998	0.81	0.81	0.811	0.83107	0.6789	0.9444	0.7925	0.8759	0.8374	0.69	0.93	0.76	0.88	0.7681	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.168944	NA	NA	0.708091	0.866632	NA	0.754	NA	2.844909
1368	12	48375975	48375975	A	G	intronic	COL2A1	NA	NA	NA	intronic	ENSG00000139219	NA	NA	NA	NA	NA	12q13.11	NA	NA	NA	NA	rs2276456	0.45	0.45	0.434	0.473243	0.3807	0.5575	0.3573	0.531	0.4857	0.38	0.58	0.36	0.47	0.39	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.014869	NA	NA	0.384884	0.492737	NA	0.457	NA	2.844416
1368	1	149029121	149029121	T	C	intergenic	LOC645166,LOC388692	dist=76067;dist=250355	NA	NA	intergenic	ENSG00000232527,ENSG00000264022	dist=77526;dist=7191	NA	NA	NA	NA	1q21.2	NA	NA	NA	NA	rs12082723	NA	NA	0.596	0.48103	0.4891	0.494	0.4726	0.4576	0.4969	NA	NA	NA	NA	NA	0.28	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.687128	NA	NA	NA	NA	NA	0.232	NA	2.8442334
1368	11	18054777	18054777	A	G	intronic	TPH1	NA	NA	NA	intronic	ENSG00000129167	NA	NA	NA	NA	NA	11p15.1	NA	NA	NA	NA	rs10832874	0.33	0.33	0.283	0.290735	0.3926	0.4802	0.3689	0.0416	0.272	0.39	0.45	0.37	0.06	0.3785	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.675446	NA	NA	0.384696	0.100682	NA	0.203	NA	2.844204
1368	7	23293098	23293098	C	A	intronic	GPNMB	NA	NA	NA	intronic	ENSG00000136235	NA	NA	NA	NA	NA	7p15.3	NA	NA	NA	NA	rs199348	0.35	0.35	0.341	0.365016	0.3757	0.13	0.3602	0.5333	0.3722	0.36	0.14	0.38	0.58	0.3726	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.607342	NA	NA	0.407558	0.480254	NA	0.319	NA	2.844142
1368	7	129736880	129736880	G	A	intronic	KLHDC10	NA	NA	NA	intronic	ENSG00000128607	NA	NA	NA	NA	NA	7q32.2	NA	NA	NA	NA	rs12531444	0.35	0.35	0.334	0.299121	0.4036	0.4276	0.3343	0.1377	0.2526	0.41	0.45	0.32	0.15	0.3519	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.962712	NA	NA	0.400465	0.171584	NA	0.181	NA	2.844035
1368	3	157004323	157004323	A	C	intronic	VEPH1	NA	NA	NA	ncRNA_intronic	ENSG00000243176	NA	NA	NA	NA	NA	3q25.32	NA	NA	NA	NA	rs4680353	0.44	0.44	0.395	0.39377	0.505	0.4097	0.6225	0.2262	0.3272	0.5	0.43	0.59	0.23	0.4701	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.136834	NA	NA	0.514651	0.288243	ID=COSN167057;OCCURENCE=1(large_intestine)	0.522	NA	2.8435823
1368	11	92570812	92570812	T	A	intronic	FAT3	NA	NA	NA	intronic	ENSG00000165323	NA	NA	NA	NA	NA	11q14.3	NA	NA	NA	NA	rs11020075	0.34	0.34	0.356	0.385383	0.4085	0.4435	0.4179	0.298	0.3967	0.33	0.41	0.36	0.25	0.4042	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.22149	NA	NA	0.34381	0.259165	NA	NA	NA	2.84349
1368	8	91064036	91064036	G	C	intronic	DECR1	NA	NA	NA	intronic	ENSG00000104325	NA	NA	NA	NA	NA	8q21.3	NA	NA	NA	NA	rs1476590	0.58	0.58	0.565	0.613219	0.339	0.6677	0.5562	0.854	0.5542	0.35	0.68	0.54	0.84	0.4665	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.275582	NA	NA	0.351047	0.752837	NA	0.572	NA	2.843453
1368	7	142162001	142162001	A	C	intergenic	LOC730441,MTRNR2L6	dist=189933;dist=212130	NA	NA	exonic	ENSG00000211724	NA	nonsynonymous SNV	ENSG00000211724:ENST00000390371:exon2:c.T274G:p.Y92D	NA	NA	7q34	NA	Name=GATA-1	NA	NA	rs73742263	0.99	0.99	0.988	0.98123	0.999	1	0.9942	0.9478	0.9796	1	1	0.99	0.95	0.9925	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.112476	NA	1	0.998426	0.955403	NA	0.986	NA	2.8434074
1368	4	109735146	109735146	T	G	intronic	COL25A1	NA	NA	NA	intronic	ENSG00000188517	NA	NA	NA	NA	NA	4q25	NA	NA	NA	NA	rs2305435	0.52	0.52	0.469	0.484824	0.5805	0.5258	0.5259	0.2912	0.5767	0.62	0.49	0.55	0.37	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.377713	NA	NA	0.576972	0.322977	NA	0.399	NA	2.842528
1368	12	108918330	108918330	G	T	intronic	SART3	NA	NA	NA	intronic	ENSG00000075856,ENSG00000198855	NA	NA	NA	NA	NA	12q23.3	NA	NA	NA	NA	rs2303632	0.24	0.24	0.243	0.196885	0.4225	0.0883	0.2161	0.0998	0.1943	0.42	0.11	0.25	0.13	0.3228	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.577461	NA	NA	0.412442	0.138901	NA	0.181	NA	2.842258
1368	8	146068594	146068594	T	C	UTR3	ZNF7	NM_003416:c.*41T>C	NA	NA	UTR3	ENSG00000147789	ENST00000325241:c.*41T>C,ENST00000544249:c.*41T>C,ENST00000446747:c.*41T>C,ENST00000528372:c.*41T>C	NA	NA	NA	NA	8q24.3	NA	Name=SETDB1	NA	NA	rs1735408	0.91	0.91	0.915	0.928315	0.8181	1	0.8934	0.9554	0.956	0.82	1	0.87	0.96	0.8626	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.133962	NA	NA	0.810842	0.929968	NA	0.819	NA	2.8417914
1368	1	43903589	43903589	G	T	intronic	SZT2	NA	NA	NA	intronic	ENSG00000198198	NA	NA	NA	NA	NA	1p34.2	NA	NA	NA	NA	rs2782648	0.28	0.28	0.242	0.211861	0.4215	0.0823	0.3862	0.146	0.0951	0.42	0.08	0.42	0.17	0.3228	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.460183	NA	NA	0.413953	0.183159	NA	0.362	NA	2.841747
1368	1	21887290	21887290	C	A	intronic	ALPL	NA	NA	NA	intronic	ENSG00000162551	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs1767430	0.29	0.29	0.306	0.261981	0.4235	0.1359	0.2666	0.2428	0.2485	0.41	0.13	0.3	0.27	0.34	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.017903	NA	NA	0.39476	0.264506	NA	0.312	NA	2.84174
1368	1	202197161	202197161	C	T	intronic	LGR6	NA	NA	NA	intronic	ENSG00000133067	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs3795598	0.27	0.27	0.235	0.249002	0.4235	0.251	0.2666	0.1006	0.2556	0.41	0.2	0.32	0.11	0.3294	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.754673	NA	NA	0.405581	0.141171	NA	0.268	NA	2.841519
1368	11	18047255	18047255	G	T	intronic	TPH1	NA	NA	NA	intronic	ENSG00000129167	NA	NA	NA	NA	NA	11p15.1	NA	NA	NA	NA	rs1799913	0.36	0.36	0.331	0.321086	0.3907	0.4752	0.3718	0.1626	0.2689	0.4	0.47	0.39	0.15	0.3836	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.223999	NA	NA	0.38423	0.182273	ID=COSM147151;OCCURENCE=1(stomach)	0.246	NA	2.84147
1368	8	66517486	66517486	C	T	intronic	ARMC1	NA	NA	NA	intronic	ENSG00000104442	NA	NA	NA	NA	NA	8q13.1	NA	NA	NA	NA	rs3765205	0.4	0.4	0.388	0.363419	0.3867	0.4355	0.4236	0.289	0.3231	0.37	0.51	0.43	0.3	0.3768	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.952469	NA	NA	0.395349	0.303361	NA	0.464	NA	2.841151
1368	9	131761437	131761437	A	G	intronic	NUP188	NA	NA	NA	intronic	ENSG00000095319	NA	NA	NA	NA	NA	9q34.11	NA	NA	NA	NA	rs2004632	0.28	0.28	0.225	0.261781	0.4274	0.1776	0.4035	0.0877	0.3129	0.43	0.16	0.39	0.11	0.3494	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.34274	NA	NA	0.382326	0.124603	NA	0.341	NA	2.840874
1368	14	35468893	35468893	T	A	intronic	SRP54	NA	NA	NA	intronic	ENSG00000100883	NA	NA	NA	NA	NA	14q13.2	NA	NA	NA	NA	rs12433712	0.45	0.45	0.436	0.422724	0.3857	0.6786	0.3458	0.2761	0.4499	0.4	0.71	0.35	0.32	0.4002	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.714507	NA	NA	0.373256	0.269755	NA	0.355	NA	2.840844
1368	12	8808006	8808006	T	C	intronic	MFAP5	NA	NA	NA	intronic	ENSG00000197614	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs11046589	0.42	0.42	0.399	0.429313	0.3807	0.4554	0.3285	0.4773	0.4591	0.37	0.46	0.34	0.5	0.4165	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.903284	NA	NA	0.362442	0.48729	NA	0.297	NA	2.840358
1368	10	6498799	6498799	C	G	intronic	PRKCQ	NA	NA	NA	intronic	ENSG00000065675	NA	NA	NA	NA	NA	10p15.1	NA	NA	NA	NA	rs2296123	0.43	0.43	0.397	0.463458	0.3608	0.4643	0.5072	0.475	0.5215	0.36	0.47	0.53	0.43	0.4227	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.882428	NA	NA	0.376512	0.475034	NA	0.384	NA	2.839988
1368	1	43912590	43912590	A	G	intronic	SZT2	NA	NA	NA	intronic	ENSG00000198198	NA	NA	NA	NA	NA	1p34.2	NA	NA	NA	NA	rs2782650	0.28	0.28	0.244	0.211861	0.4215	0.0813	0.3847	0.146	0.0971	0.42	0.08	0.42	0.17	0.3248	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.686898	NA	NA	0.413721	0.183159	NA	0.355	NA	2.839979
1368	12	123983941	123983941	G	A	intronic	RILPL1	NA	NA	NA	intronic	ENSG00000188026	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs9697264	0.36	0.36	0.369	0.376398	0.3777	0.0139	0.4323	0.6959	0.2771	0.39	0.01	0.41	0.68	0.3864	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.779594	NA	NA	0.396724	0.634094	NA	0.326	NA	2.839176
1368	12	31300891	31300891	C	A	intergenic	DDX11,FAM60A	dist=43166;dist=132629	NA	NA	ncRNA_exonic	ENSG00000177359	NA	NA	NA	Score=289;Name=lod=20	NA	12p11.21	NA	NA	NA	NA	rs4082530	0.64	0.64	0.609	0.629792	0.7266	0.6647	0.6614	0.5151	0.6268	0.73	0.65	0.67	0.49	0.6997	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.133615	NA	0.02	0.734625	0.523545	NA	0.493	NA	2.839075
1368	11	96106661	96106661	C	G	intronic	CCDC82	NA	NA	NA	intronic	ENSG00000149231	NA	NA	NA	NA	NA	11q21	NA	NA	NA	NA	rs11021560	0.33	0.33	0.302	0.308906	0.4016	0.254	0.3012	0.2746	0.3221	0.41	0.24	0.32	0.31	0.3661	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.088135	NA	NA	0.393268	0.282429	NA	0.391	NA	2.839032
1368	1	145558824	145558824	A	C	intronic	ANKRD35,NBPF10	NA	NA	NA	intronic	ENSG00000198483	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs17352281	0.3	0.3	0.265	0.277356	0.4056	0.1587	0.3732	0.289	0.184	0.39	0.13	0.39	0.29	0.3529	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.729403	2.729403	NA	0.402674	0.328643	NA	0.246	NA	2.838826
1368	8	145624640	145624640	C	T	intronic	CPSF1	NA	NA	NA	intronic	ENSG00000071894	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs2293963	0.43	0.43	0.397	0.459065	0.3668	0.6597	0.4986	0.2398	0.6155	0.35	0.65	0.49	0.24	0.4393	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.003136	NA	NA	0.355263	0.274443	NA	0.116	NA	2.838637
1368	11	129752991	129752991	G	C	intronic	NFRKB	NA	NA	NA	intronic	ENSG00000170322	NA	NA	NA	NA	NA	11q24.3	NA	NA	NA	NA	rs2293664	0.36	0.36	0.355	0.311102	0.3926	0.4921	0.3746	0.1195	0.2546	0.4	0.48	0.37	0.14	0.3704	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.285496	NA	NA	0.39865	0.151522	NA	0.319	NA	2.83835
1368	11	60666116	60666116	G	T	intronic	PRPF19	NA	NA	NA	intronic	ENSG00000110107	NA	NA	NA	NA	NA	11q12.2	NA	NA	NA	NA	rs3763841	0.32	0.32	0.307	0.309904	0.3887	0.3194	0.3905	0.1475	0.3814	0.39	0.33	0.4	0.16	0.3711	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.072285	NA	NA	0.402303	0.188379	NA	0.355	NA	2.837897
1368	19	39963828	39963828	T	A	intronic	SUPT5H	NA	NA	NA	intronic	ENSG00000196235	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs45568533	0.46	0.46	0.456	0.493011	0.3887	0.4613	0.4006	0.621	0.5256	0.39	0.42	0.43	0.63	0.4245	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.924379	NA	NA	0.349616	0.579437	NA	0.42	NA	2.837184
1368	12	2851563	2851563	T	C	intergenic	CACNA1C,LOC283440	dist=44448;dist=18803	NA	NA	downstream	ENSG00000256150	NA	NA	NA	NA	NA	12p13.33	NA	NA	NA	NA	rs10774060	0.69	0.69	0.591	0.722444	0.663	0.7897	0.7565	0.5794	0.8834	0.65	0.82	0.73	0.57	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.821289	NA	NA	NA	NA	NA	0.507	NA	2.837
1368	12	2851583	2851583	G	C	intergenic	CACNA1C,LOC283440	dist=44468;dist=18783	NA	NA	downstream	ENSG00000256150	NA	NA	NA	NA	NA	12p13.33	NA	NA	NA	NA	rs10848697	0.67	0.67	0.596	0.675319	0.663	0.7887	0.7406	0.41	0.8834	0.66	0.83	0.73	0.43	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.249234	NA	NA	NA	NA	NA	0.471	NA	2.837
1368	11	3026712	3026712	C	T	intronic	CARS	NA	NA	NA	intronic	ENSG00000110619	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs7931504	0.32	0.32	0.3	0.334465	0.3926	0.1984	0.3213	0.3389	0.4182	0.4	0.2	0.31	0.34	0.3792	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.578958	NA	NA	0.391228	0.358311	NA	0.29	NA	2.836972
1368	10	429932	429932	C	T	intronic	DIP2C	NA	NA	NA	intronic	ENSG00000151240	NA	NA	NA	NA	NA	10p15.3	NA	NA	NA	NA	rs7092412	0.43	0.43	0.41	0.447085	0.3588	0.4841	0.4568	0.4448	0.4959	0.37	0.49	0.46	0.43	0.4359	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.454866	NA	NA	0.368341	0.440536	NA	0.457	NA	2.836959
1368	4	15568992	15568992	T	C	intronic	CC2D2A	NA	NA	NA	intronic	ENSG00000048342	NA	NA	NA	NA	NA	4p15.32	NA	NA	NA	NA	rs13121363	0.66	0.66	0.656	0.66254	0.7286	0.5288	0.7709	0.6104	0.726	0.73	0.54	0.75	0.62	0.7122	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.043122	NA	NA	0.722976	0.655648	NA	0.667	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000114172.2;CLNDSDB=.;CLNDSDBID=.	2.836224
1368	20	29873081	29873081	T	A	intergenic	DEFB115,DEFB116	dist=25646;dist=17934	NA	NA	downstream	ENSG00000224628	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs6061026	0.71	0.71	0.717	0.752995	0.664	0.7609	0.7147	0.8457	0.7382	0.65	0.72	0.7	0.79	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.350988	NA	NA	NA	NA	NA	0.739	NA	2.836
1368	12	31242440	31242440	A	G	intronic	DDX11	NA	NA	NA	UTR3	ENSG00000013573	ENST00000542244:c.*453A>G	NA	NA	NA	NA	12p11.21	NA	NA	NA	NA	rs2075318	0.62	0.62	0.551	0.60643	0.4125	0.7629	0.585	0.6831	0.5562	0.43	0.78	0.57	0.75	0.479	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.305942	NA	NA	0.439288	0.66485	NA	0.152	NA	2.8358787
1368	1	241951106	241951106	A	G	intronic	WDR64	NA	NA	NA	intronic	ENSG00000162843	NA	NA	NA	NA	NA	1q43	NA	NA	NA	NA	rs6429313	0.42	0.42	0.389	0.419329	0.4095	0.4325	0.4092	0.4599	0.3681	0.4	0.41	0.45	0.46	0.3887	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.606949	NA	NA	0.366047	0.459601	NA	0.493	NA	2.835753
1368	4	15569146	15569146	A	C	intronic	CC2D2A	NA	NA	NA	intronic	ENSG00000048342	NA	NA	NA	NA	NA	4p15.32	NA	NA	NA	NA	rs13116304	0.66	0.66	0.663	0.66234	0.7286	0.5278	0.7709	0.6104	0.726	0.73	0.54	0.75	0.62	0.7113	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.800077	NA	NA	0.724367	0.657609	NA	0.667	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000114175.2;CLNDSDB=.;CLNDSDBID=.	2.835733
1368	17	78084688	78084688	C	A	intronic	GAA	NA	NA	NA	intronic	ENSG00000171298	NA	NA	NA	NA	NA	17q25.3	Score=831;Name=V$OLF1_01	NA	NA	NA	rs2304843	0.61	0.61	0.605	0.599241	0.7515	0.5427	0.5432	0.5113	0.6595	0.75	0.57	0.55	0.49	0.6748	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.176912	NA	NA	0.738023	0.536768	NA	0.645	NA	2.835677
1368	1	210003402	210003402	T	C	intronic	DIEXF	NA	NA	NA	intronic	ENSG00000117597	NA	NA	NA	NA	NA	1q32.2	NA	NA	Name=2	NA	rs599649	0.6	0.6	0.61	0.590455	0.7286	0.3859	0.5403	0.6097	0.6687	0.72	0.41	0.61	0.63	0.6745	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.303603	1.303603	NA	0.761628	0.599183	ID=COSN163426;OCCURENCE=1(NS)	0.71	NA	2.835272
1368	8	144996635	144996635	G	A	intronic	PLEC	NA	NA	NA	intronic	ENSG00000178209	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs11786934	0.24	0.24	0.2	0.230631	0.4274	0.1419	0.2954	0.0287	0.3466	0.42	0.16	0.3	0.03	0.3432	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.598783	NA	NA	0.394289	0.085656	NA	0.275	NA	2.835111
1369	17	39767836	39767836	G	A	intronic	KRT16	NA	NA	NA	intronic	ENSG00000186832	NA	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs2100509	0.71	0.71	0.689	0.718051	0.6044	0.9296	0.7507	0.59	0.7669	0.6	0.94	0.72	0.59	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.359761	NA	NA	0.560968	0.578757	NA	0.609	NA	2.834632
1369	17	78084507	78084507	G	C	intronic	GAA	NA	NA	NA	intronic	ENSG00000171298	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs2304844	0.61	0.61	0.637	0.603035	0.7515	0.5417	0.5432	0.5182	0.6708	0.75	0.56	0.55	0.49	0.676	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.242437	NA	NA	0.737907	0.538357	NA	0.645	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000078158.1;CLNDSDB=.;CLNDSDBID=.	2.834593
1369	9	131761899	131761899	A	G	intronic	NUP188	NA	NA	NA	intronic	ENSG00000095319	NA	NA	NA	NA	NA	9q34.11	NA	NA	NA	NA	rs2302811	0.29	0.29	0.266	0.279153	0.4264	0.2212	0.4035	0.0885	0.3569	0.43	0.21	0.39	0.11	0.3567	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.811546	NA	NA	0.382442	0.126419	NA	0.348	NA	2.834458
1369	8	145622923	145622923	T	C	intronic	CPSF1	NA	NA	NA	intronic	ENSG00000071894	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs2977835	0.46	0.46	0.418	0.500599	0.3678	0.6597	0.5086	0.3873	0.6207	0.35	0.65	0.49	0.38	0.4454	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.497963	NA	NA	0.352548	0.377177	NA	0.312	NA	2.834252
1369	20	44180813	44180813	G	A	intronic	WFDC8	NA	NA	NA	intronic	ENSG00000158901	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs17348421	0.29	0.29	0.276	0.283347	0.4016	0.0585	0.3444	0.3707	0.2321	0.4	0.05	0.36	0.35	0.3502	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.223517	2.223517	NA	0.414302	0.374035	NA	0.413	NA	2.833898
1369	1	161722272	161722272	C	A	intronic	DUSP12	NA	NA	NA	intronic	ENSG00000081721	NA	NA	NA	NA	NA	1q23.3	NA	NA	NA	NA	rs10917852	0.24	0.24	0.207	0.214457	0.4553	0.0486	0.2637	0.0514	0.3231	0.46	0.06	0.3	0.05	0.3222	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.721543	NA	NA	0.389109	0.098956	NA	0.312	NA	2.833391
1369	14	90767759	90767759	G	A	intronic	NRDE2	NA	NA	NA	intronic	ENSG00000119720	NA	NA	NA	NA	NA	14q32.11	NA	NA	NA	NA	rs3742668	0.37	0.37	0.353	0.345248	0.3966	0.5069	0.3084	0.1634	0.3978	0.41	0.5	0.33	0.19	0.3745	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.842759	NA	NA	0.395557	0.220254	NA	0.348	NA	2.833343
1369	1	23836364	23836364	A	G	UTR3	E2F2	NM_004091:c.*8T>C	NA	NA	UTR3	ENSG00000007968	ENST00000361729:c.*8T>C	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs2075993	0.42	0.42	0.372	0.348842	0.5219	0.5605	0.4193	0.0499	0.3067	0.53	0.6	0.39	0.05	0.4727	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.022203	NA	NA	0.505583	0.13527	NA	0.348	NA	2.8331504
1369	17	33502937	33502937	G	A	intronic	UNC45B	NA	NA	NA	intronic	ENSG00000141161	NA	NA	NA	NA	NA	17q12	NA	NA	NA	NA	rs11657816	0.34	0.34	0.359	0.335863	0.4056	0.2629	0.2608	0.3616	0.3579	0.42	0.29	0.27	0.35	0.3568	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.041114	NA	NA	0.404651	0.336133	NA	0.399	NA	2.832949
1369	4	70465153	70465153	A	T	intronic	UGT2A1,UGT2A2	NA	NA	NA	intronic	ENSG00000173610,ENSG00000270386,ENSG00000271271	NA	NA	NA	NA	NA	4q13.2	NA	NA	NA	NA	rs3775782	0.42	0.42	0.394	0.421326	0.3598	0.5694	0.4712	0.3041	0.455	0.35	0.6	0.44	0.3	0.4169	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.123279	NA	NA	0.39044	0.347639	NA	0.428	NA	2.83286
1369	17	78079544	78079544	C	G	intronic	GAA	NA	NA	NA	intronic	ENSG00000171298	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs3816256	0.61	0.61	0.604	0.602835	0.7535	0.5437	0.5418	0.5212	0.6626	0.75	0.57	0.55	0.5	0.6759	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.304028	NA	NA	0.738372	0.544485	NA	0.645	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=mult;CLNACC=RCV000078182.2;CLNDSDB=.;CLNDSDBID=.	2.832228
1369	6	5431960	5431960	A	G	intronic	FARS2	NA	NA	NA	UTR3	ENSG00000145982	ENST00000445533:c.*45A>G	NA	NA	NA	NA	6p25.1	NA	NA	NA	NA	rs10900967	0.4	0.4	0.358	0.360823	0.4771	0.379	0.4424	0.2534	0.3098	0.5	0.41	0.42	0.24	0.417	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.24737	NA	NA	0.440984	0.283105	NA	0.312	NA	2.8315827
1369	20	31647864	31647864	C	A	intronic	BPIFB3	NA	NA	NA	intronic	ENSG00000186190	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs6088084	0.48	0.48	0.443	0.48123	0.3867	0.7579	0.4712	0.3177	0.5215	0.39	0.75	0.44	0.33	0.4198	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.290306	NA	NA	0.362209	0.308897	NA	0.442	NA	2.831291
1369	17	61996204	61996204	T	C	upstream	GH1	NA	NA	NA	upstream	ENSG00000204414,ENSG00000259384	NA	NA	NA	NA	NA	17q23.3	NA	NA	NA	NA	rs6171	0.37	0.37	0.317	0.363419	0.4085	0.3234	0.2997	0.4569	0.2771	0.39	0.28	0.34	0.45	NA	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.194378	NA	NA	0.42709	0.439306	NA	0.5	NA	2.8310766
1369	19	39949764	39949764	C	T	intronic	SUPT5H	NA	NA	NA	intronic	ENSG00000196235	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs1529733	0.46	0.46	0.456	0.495407	0.3887	0.4613	0.4006	0.6218	0.5368	0.39	0.42	0.43	0.63	0.4289	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.835726	NA	NA	0.351744	0.580799	NA	0.42	NA	2.830656
1369	19	54756024	54756024	A	C	intronic	LILRB5	NA	NA	NA	intronic	ENSG00000105609	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs405443	0.61	0.61	0.58	0.573482	0.5885	0.7679	0.5476	0.4062	0.6022	0.59	0.83	0.55	0.44	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.002222	NA	NA	0.581081	0.401012	NA	0.319	NA	2.830419
1369	17	36909061	36909061	A	G	UTR5	PSMB3	NM_002795:c.-19A>G	NA	NA	UTR5	ENSG00000108294	ENST00000225426:c.-19A>G,ENST00000579088:c.-348A>G,ENST00000584662:c.-19A>G,ENST00000579729:c.-19A>G	NA	NA	NA	NA	17q12	NA	Name=KAP1,c-Fos,Pol2-4H8,RFX5_(N-494),STAT3,YY1,TBP,Nrf1,SIX5,IRF3,NFKB,HEY1,YY1_(C-20),Pol2,SP1,Pol2(phosphoS2),TAF1,SREBP1,NF-YA,SP2_(SC-643),GTF2F1_(RAP-74),CHD2_(N-1250),NF-YB,STAT1,ELF1_(SC-631)	NA	NA	rs228274	0.81	0.81	0.806	0.784944	0.8459	0.9008	0.8429	0.6611	0.729	0.85	0.89	0.82	0.66	0.8172	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.364663	1.364663	NA	0.840233	0.703132	NA	0.833	NA	2.8300004
1369	1	157606064	157606064	C	T	intergenic	FCRL4,FCRL3	dist=38194;dist=41914	NA	NA	downstream	ENSG00000233712	NA	NA	NA	NA	NA	1q23.1	NA	NA	NA	NA	rs2758695	0.76	0.76	0.767	0.774161	0.67	0.8165	0.7378	0.8767	0.7249	0.68	0.83	0.71	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.748087	NA	NA	NA	NA	NA	0.703	NA	2.83
1369	16	11017058	11017058	G	A	intronic	CIITA	NA	NA	NA	intronic	ENSG00000179583	NA	NA	NA	NA	NA	16p13.13	NA	NA	NA	NA	rs4781024	0.32	0.32	0.326	0.304113	0.4076	0.3304	0.2839	0.1649	0.3732	0.4	0.33	0.33	0.18	0.3672	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.7357	NA	NA	0.395233	0.212335	NA	0.348	NA	2.829967
1369	1	214571251	214571251	A	C	intronic	PTPN14	NA	NA	NA	intronic	ENSG00000152104	NA	NA	NA	NA	NA	1q41	NA	NA	NA	NA	rs11580603	0.41	0.41	0.385	0.350439	0.4046	0.4365	0.3977	0.3389	0.1881	0.42	0.42	0.42	0.37	0.3734	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.805401	NA	NA	0.392093	0.330005	NA	0.239	NA	2.829907
1369	20	18142924	18142924	G	A	intronic	CSRP2BP	NA	NA	NA	intronic	ENSG00000149474	NA	NA	NA	NA	NA	20p11.23	NA	NA	NA	NA	rs3748511	0.26	0.26	0.243	0.233626	0.4205	0.0575	0.268	0.1838	0.2658	0.42	0.05	0.3	0.23	0.3329	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.607632	NA	NA	0.417442	0.189968	NA	0.246	NA	2.829158
1369	8	144996598	144996598	G	A	intronic	PLEC	NA	NA	NA	intronic	ENSG00000178209	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs11786903	0.25	0.25	0.184	0.230631	0.4274	0.1419	0.2954	0.028	0.3476	0.42	0.16	0.3	0.03	0.3448	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.727159	NA	NA	0.398871	0.090573	NA	0.275	NA	2.828929
1369	6	161139502	161139502	G	A	intronic	PLG	NA	NA	NA	intronic	ENSG00000122194	NA	NA	NA	NA	NA	6q26	NA	NA	NA	NA	rs2295368	0.37	0.37	0.361	0.34984	0.3897	0.4554	0.2824	0.2368	0.4008	0.4	0.49	0.3	0.24	0.3784	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.698349	1.698349	NA	0.40314	0.266682	NA	0.254	NA	2.82876
1369	11	102668702	102668702	T	C	ncRNA_intronic	WTAPP1	NA	NA	NA	ncRNA_intronic	ENSG00000255282	NA	NA	NA	NA	NA	11q22.2	NA	NA	NA	NA	rs470358	0.65	0.65	0.674	0.672324	0.6213	0.5764	0.572	0.8601	0.6411	0.61	0.58	0.57	0.85	0.6153	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.93637	NA	NA	0.601535	0.80118	NA	0.652	NA	2.8285316
1369	1	11594400	11594400	T	C	intronic	PTCHD2	NA	NA	NA	intronic	ENSG00000204624	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs2235663	0.58	0.58	0.622	0.638179	0.3469	0.749	0.3127	0.944	0.6411	0.35	0.74	0.32	0.95	0.4529	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.278704	NA	NA	0.372725	0.84832	NA	0.522	NA	2.827475
1369	16	19663269	19663269	T	C	intronic	C16orf62	NA	NA	NA	intronic	ENSG00000103544	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs875648	0.48	0.48	0.519	0.501797	0.3648	0.3502	0.3516	0.8828	0.3906	0.34	0.4	0.37	0.87	0.4505	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.484608	NA	NA	0.357326	0.771507	NA	0.601	NA	2.827374
1369	11	94225920	94225920	C	T	intronic	MRE11A	NA	NA	NA	UTR5	ENSG00000020922	ENST00000407439:c.-84G>A	NA	NA	NA	NA	11q21	NA	NA	NA	NA	rs497763	0.46	0.46	0.427	0.457268	0.4483	0.5	0.4798	0.3396	0.5654	0.43	0.55	0.48	0.38	0.4621	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.700423	NA	NA	0.429037	0.373239	NA	0.37	NA	2.8272297
1369	2	119732042	119732042	T	C	intronic	MARCO	NA	NA	NA	intronic	ENSG00000019169	NA	NA	NA	NA	NA	2q14.2	NA	NA	NA	NA	rs11693199	0.24	0.24	0.219	0.168331	0.4433	0.0665	0.2752	0.0446	0.0818	0.44	0.07	0.32	0.06	0.3176	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.027956	NA	NA	0.412791	0.097367	NA	0.246	NA	2.826309
1369	3	145788803	145788803	T	C	intronic	PLOD2	NA	NA	NA	ncRNA_intronic	ENSG00000243415	NA	NA	NA	NA	NA	3q24	NA	NA	NA	NA	rs2305274	0.51	0.51	0.519	0.5	0.503	0.5744	0.4755	0.4955	0.4438	0.5	0.56	0.48	0.5	0.5065	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.266567	NA	NA	0.497556	0.522707	NA	0.449	NA	2.8262773
1369	16	71406024	71406024	C	T	intronic	CALB2	NA	NA	NA	intronic	ENSG00000172137	NA	NA	NA	NA	NA	16q22.2	NA	NA	NA	NA	rs7203012	0.4	0.4	0.348	0.362819	0.4016	0.2907	0.5562	0.388	0.226	0.42	0.29	0.53	0.39	0.3902	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.18606	NA	NA	0.381949	0.37796	NA	0.486	NA	2.826251
1369	16	56686471	56686471	G	T	intronic	MT1B	NA	NA	NA	ncRNA_intronic	ENSG00000259923	NA	NA	NA	NA	NA	16q12.2	NA	NA	NA	NA	rs964374	0.39	0.39	0.387	0.395168	0.503	0.3185	0.402	0.2859	0.5061	0.51	0.3	0.44	0.27	0.4814	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.337805	NA	NA	0.522907	0.356005	NA	0.413	NA	2.8260263
1369	8	48114035	48114035	G	C	intergenic	LOC100287846,KIAA0146	dist=9596;dist=59454	NA	NA	downstream	ENSG00000215177	NA	NA	NA	NA	NA	8q11.21	NA	NA	NA	NA	rs4379458	0.15	0.15	0.135	0.17472	0.2366	0.122	0.1182	0.0189	0.4162	0.24	0.14	0.13	0.03	0.2141	0.24	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.371344	NA	NA	0.223872	0.053245	NA	0.094	NA	2.825428
1370	9	33290532	33290532	A	G	UTR5	NFX1	NM_002504:c.-39A>G,NM_147133:c.-39A>G,NM_147134:c.-39A>G	NA	NA	UTR5	ENSG00000086102	ENST00000379540:c.-39A>G,ENST00000379521:c.-39A>G	NA	NA	NA	NA	9p13.3	NA	Name=Oct-2,ELF1_(SC-631),Max,CHD2_(N-1250),CEBPB,BHLHE40,p300,USF2,GABP,POU2F2,E2F4,E2F6_(H-50),ETS1,SREBP1,TAF1,GATA-1,USF1_(SC-8983),E2F6,YY1_(C-20),TCF4,Pol2(phosphoS2),SP1,NRSF,ATF3,Mxi1_(bHLH),Pol2,SIX5,GRp20,PAX5-N19,PAX5-C20,NFKB,HEY1,c-Myc,CCNT2,IRF1,TBP,USF-1,TCF12,Nrf1,ELK4,FOSL2,E2F1,GATA-2,Pol2-4H8,ZNF263,KAP1,Sin3Ak-20,HA-E2F1,YY1,Ini1,RFX5_(N-494)	NA	NA	rs830576	0.82	0.82	0.828	0.820088	0.827	0.8383	0.8314	0.8147	0.7935	0.84	0.83	0.8	0.79	0.8376	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.34538	NA	NA	0.843837	0.814344	NA	0.841	NA	2.8248964
1370	7	91711791	91711791	A	G	intronic	AKAP9	NA	NA	NA	intronic	ENSG00000127914	NA	NA	NA	NA	NA	7q21.2	NA	NA	NA	NA	rs2079082	0.35	0.35	0.369	0.360623	0.3877	0.1617	0.3559	0.4561	0.4121	0.39	0.17	0.38	0.49	0.3834	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.164477	NA	NA	0.40424	0.481793	NA	0.384	NA	2.82466
1370	1	183084607	183084607	A	G	intronic	LAMC1	NA	NA	NA	intronic	ENSG00000135862	NA	NA	NA	NA	NA	1q25.3	NA	NA	NA	NA	rs3736888	0.45	0.45	0.024	0.530351	0.5636	0.628	0.6254	0.3268	0.6033	0.48	0.52	0.52	0.27	0.5695	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.016372	NA	NA	0.042326	0.021108	NA	NA	NA	2.824574
1370	3	121448675	121448675	T	A	intronic	GOLGB1	NA	NA	NA	intronic	ENSG00000173230	NA	NA	NA	NA	NA	3q13.33	NA	NA	NA	NA	rs28497949	0.32	0.32	0.318	0.278554	0.4095	0.3016	0.2579	0.2035	0.2362	0.4	0.34	0.25	0.2	0.3519	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.049965	NA	NA	0.414186	0.239101	NA	0.406	NA	2.824414
1370	1	201353827	201353827	G	C	intronic	LAD1	NA	NA	NA	intronic	ENSG00000159166	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs10920189	0.51	0.51	0.479	0.502796	0.6034	0.4802	0.6599	0.2526	0.6493	0.61	0.51	0.62	0.3	0.5724	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.079351	NA	NA	NA	NA	NA	0.478	NA	2.8242
1370	8	27294606	27294606	G	C	intronic	PTK2B	NA	NA	NA	intronic	ENSG00000120899	NA	NA	NA	NA	NA	8p21.2	NA	NA	NA	NA	rs7005954	0.34	0.34	0.342	0.378794	0.3926	0.1954	0.3934	0.4629	0.4294	0.41	0.15	0.36	0.42	0.3837	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.60679	NA	NA	0.399535	0.447118	NA	0.471	NA	2.824165
1370	22	23247028	23247028	A	G	intergenic	IGLL5,RTDR1	dist=9015;dist=154565	NA	NA	upstream	ENSG00000211678	NA	NA	NA	NA	NA	22q11.22	NA	NA	NA	NA	rs464478	NA	NA	0.632	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.676	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.124921	NA	NA	NA	NA	NA	0.565	NA	2.824
1370	5	167891668	167891668	G	A	intronic	WWC1	NA	NA	NA	intronic	ENSG00000113645	NA	NA	NA	NA	NA	5q34	NA	NA	NA	NA	rs62384143	0.25	0.25	0.255	0.259385	0.4334	0.0407	0.304	0.1362	0.4407	0.45	0.03	0.33	0.14	0.3432	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.417662	NA	NA	0.399874	0.134253	NA	0.283	NA	2.823526
1370	10	129209084	129209084	A	G	intronic	DOCK1	NA	NA	NA	intronic	ENSG00000150760	NA	NA	NA	NA	NA	10q26.2	NA	NA	NA	NA	rs2296628	0.42	0.42	0.385	0.401957	0.3748	0.5665	0.5648	0.1611	0.4703	0.38	0.6	0.52	0.19	0.437	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.116476	NA	NA	0.365286	0.184673	NA	0.312	NA	2.822914
1370	8	27308538	27308538	G	A	intronic	PTK2B	NA	NA	NA	intronic	ENSG00000120899	NA	NA	NA	NA	NA	8p21.2	NA	NA	NA	NA	rs751018	0.34	0.34	0.34	0.384784	0.3926	0.1964	0.3934	0.4841	0.4305	0.41	0.16	0.36	0.45	0.3847	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.045383	NA	NA	0.399884	0.458693	NA	0.493	NA	2.822816
1370	5	158697481	158697481	C	G	intronic	UBLCP1	NA	NA	NA	intronic	ENSG00000164332	NA	NA	NA	NA	NA	5q33.3	NA	NA	NA	NA	rs3734104	0.51	0.51	0.486	NA	NA	NA	NA	NA	NA	0.61	0.51	0.55	0.32	0.5642	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.088233	NA	NA	0.61314	0.365184	NA	0.638	NA	2.82266
1370	8	144801681	144801681	G	A	intronic	MAPK15	NA	NA	NA	intronic	ENSG00000181085	NA	NA	NA	NA	NA	8q24.3	NA	NA	Name=2	NA	rs11778657	0.52	0.52	0.49	0.481829	0.7763	0.4435	0.6167	0.0908	0.6513	0.78	0.45	0.65	0.11	0.6483	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.097744	NA	NA	0.753259	0.212403	NA	0.362	NA	2.822141
1370	8	129021179	129021179	G	A	ncRNA_exonic	MIR1206	NA	NA	NA	ncRNA_intronic	ENSG00000249859	NA	NA	NA	NA	NA	8q24.21	NA	NA	NA	NA	rs2114358	0.7	0.7	0.692	0.671526	0.6233	0.6944	0.7147	0.7655	0.5399	0.63	0.73	0.7	0.77	0.6254	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.022231	NA	NA	0.596315	0.723852	NA	0.616	NA	2.8216516
1370	14	50671133	50671133	A	G	intronic	SOS2	NA	NA	NA	intronic	ENSG00000100485	NA	NA	NA	NA	NA	14q21.3	NA	NA	NA	NA	rs12888783	0.28	0.28	0.254	0.242013	0.4235	0.2232	0.2464	0.0908	0.2761	0.42	0.21	0.28	0.12	0.3437	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.486259	1.486259	NA	0.411367	0.138119	NA	0.217	NA	2.821433
1370	11	94354019	94354019	T	C	intronic	PIWIL4	NA	NA	NA	ncRNA_intronic	ENSG00000255929	NA	NA	NA	NA	NA	11q21	NA	NA	NA	NA	rs504010	0.5	0.5	0.52	0.501198	0.503	0.4901	0.5058	0.5454	0.4479	0.5	0.47	0.46	0.56	0.5014	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.109369	NA	NA	0.508027	0.542935	NA	0.543	NA	2.8209063
1370	2	27663416	27663416	G	T	intronic	NRBP1	NA	NA	NA	intronic	ENSG00000115216	NA	NA	NA	NA	NA	2p23.3	NA	NA	NA	NA	rs1260342	0.4	0.4	0.42	0.453874	0.3757	0.1667	0.4827	0.7315	0.4346	0.39	0.14	0.42	0.71	0.4194	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.789423	NA	NA	0.384302	0.664094	NA	0.609	NA	2.820598
1370	13	96505952	96505952	T	C	intronic	UGGT2	NA	NA	NA	intronic	ENSG00000102595	NA	NA	NA	NA	NA	13q32.1	NA	NA	NA	NA	rs3099360	0.36	0.36	0.324	0.351238	0.3738	0.4643	0.4496	0.171	0.3855	0.38	0.47	0.41	0.16	0.3998	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.457702	NA	NA	0.405908	0.210849	NA	0.362	NA	2.820492
1370	11	50129261	50129261	T	G	intergenic	OR4C12,LOC441601	dist=125190;dist=109738	NA	NA	upstream	ENSG00000255442	NA	NA	NA	NA	NA	11p11.12	NA	NA	NA	NA	rs1995041	0.68	0.68	0.653	0.698482	0.6799	0.7837	0.7824	0.5439	0.7791	0.67	0.8	0.77	0.5	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.567647	NA	NA	NA	NA	NA	0.623	NA	2.8201
1370	10	135105991	135105991	G	A	intronic	TUBGCP2	NA	NA	NA	intronic	ENSG00000130640	NA	NA	NA	NA	NA	10q26.3	NA	NA	NA	NA	rs72864793	0.44	0.44	0.414	0.446685	0.4384	0.4524	0.4597	0.4062	0.4949	0.45	0.42	0.49	0.4	0.3143	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.749135	NA	NA	0.427209	0.39537	NA	0.101	NA	2.820091
1370	7	134877935	134877935	A	G	intronic	WDR91	NA	NA	NA	intronic	ENSG00000105875	NA	NA	NA	NA	NA	7q33	NA	NA	Name=8	NA	rs292573	0.72	0.72	0.711	0.712859	0.7097	0.8224	0.8372	0.497	0.8067	0.72	0.83	0.82	0.53	0.7437	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.196382	NA	NA	0.726977	0.554471	NA	0.725	NA	2.819623
1370	12	56493822	56493822	A	C	intronic	ERBB3	NA	NA	NA	intronic	ENSG00000065361	NA	NA	NA	NA	NA	12q13.2	NA	NA	NA	NA	rs2292238	0.35	0.35	0.327	0.295128	0.4135	0.3214	0.4207	0.1536	0.2485	0.42	0.37	0.4	0.2	0.3612	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.855877	1.855877	NA	0.406279	0.197912	NA	0.341	NA	2.819021
1370	7	138429823	138429823	C	T	intronic	ATP6V0A4	NA	NA	NA	intronic	ENSG00000105929	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs55843107	0.41	0.41	0.373	0.387181	0.3767	0.5942	0.5735	0.1006	0.4397	0.38	0.64	0.5	0.1	0.4219	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4968	NA	NA	0.382558	0.168861	NA	0.297	NA	2.818842
1370	8	145001300	145001300	T	A	intronic	PLEC	NA	NA	NA	intronic	ENSG00000178209	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs55984967	0.25	0.25	0.208	0.230831	0.4274	0.1429	0.2954	0.028	0.3476	0.42	0.16	0.3	0.03	0.3437	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.391417	NA	NA	0.410106	0.089763	NA	0.283	NA	2.818794
1370	8	145001372	145001372	T	C	intronic	PLEC	NA	NA	NA	intronic	ENSG00000178209	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs11782890	0.24	0.24	0.195	0.23103	0.4274	0.1429	0.2968	0.028	0.3476	0.42	0.16	0.3	0.03	0.3438	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.650684	NA	NA	0.410697	0.092518	NA	0.283	NA	2.818103
1370	18	51933199	51933199	G	T	intergenic	C18orf54,DYNAP	dist=24795;dist=325191	NA	NA	downstream	ENSG00000264350	NA	NA	NA	NA	NA	18q21.2	NA	NA	NA	NA	rs3826581	0.74	0.74	0.739	0.750599	0.6819	0.7004	0.7363	0.8623	0.7321	0.7	0.72	0.71	0.86	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.393868	3.393868	NA	NA	NA	NA	0.746	NA	2.8181
1370	18	51933507	51933507	G	A	intergenic	C18orf54,DYNAP	dist=25103;dist=324883	NA	NA	upstream	ENSG00000264350	NA	NA	NA	NA	NA	18q21.2	NA	NA	NA	NA	rs3744854	0.75	0.75	0.746	0.761382	0.6819	0.7024	0.7406	0.8994	0.7321	0.7	0.72	0.72	0.89	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.816726	NA	NA	NA	NA	NA	0.768	NA	2.8181
1370	18	51933540	51933540	A	C	intergenic	C18orf54,DYNAP	dist=25136;dist=324850	NA	NA	upstream	ENSG00000264350	NA	NA	NA	NA	NA	18q21.2	NA	NA	NA	NA	rs3744853	0.75	0.75	0.739	0.755192	0.6819	0.7024	0.7363	0.8782	0.7321	0.7	0.72	0.71	0.88	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.075366	NA	NA	NA	NA	NA	0.761	NA	2.8181
1370	4	871624	871624	C	T	intronic	GAK	NA	NA	NA	intronic	ENSG00000178950	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs1564281	0.34	0.34	0.361	0.352236	0.3887	0.2817	0.3084	0.3434	0.4305	0.4	0.29	0.32	0.32	0.3843	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.570788	NA	NA	0.409186	0.359964	NA	0.326	NA	2.817814
1370	20	44190705	44190705	T	G	intronic	WFDC8	NA	NA	NA	intronic	ENSG00000158901	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs3817887	0.29	0.29	0.284	0.283347	0.4016	0.0585	0.3444	0.3707	0.2321	0.4	0.05	0.36	0.35	0.3661	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.382419	NA	NA	0.414535	0.374262	NA	0.413	NA	2.817765
1370	20	44333052	44333052	A	G	intronic	WFDC10B,WFDC13	NA	NA	NA	intronic	ENSG00000168634,ENSG00000182931	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs980984	0.49	0.49	0.459	0.524361	0.3837	0.7798	0.3127	0.4523	0.6534	0.36	0.76	0.34	0.48	0.4325	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.144863	3.144863	NA	0.366512	0.400363	NA	0.326	NA	2.817288
1370	7	91727385	91727385	G	A	intronic	AKAP9	NA	NA	NA	intronic	ENSG00000127914	NA	NA	NA	NA	NA	7q21.2	NA	NA	NA	NA	rs6946356	0.36	0.36	0.338	0.362021	0.3857	0.1607	0.3559	0.4652	0.41	0.39	0.17	0.38	0.5	0.3947	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.311926	1.311926	NA	0.402652	0.481835	NA	0.391	NA	2.816948
1370	20	4705756	4705756	T	C	UTR3	PRND	NM_012409:c.*28T>C	NA	NA	UTR3	ENSG00000171864	ENST00000305817:c.*28T>C	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs2756263	0.51	0.51	0.551	0.552716	0.4891	0.3998	0.3862	0.7103	0.681	0.5	0.4	0.39	0.73	0.5194	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.652414	NA	NA	0.508145	0.673479	NA	0.514	NA	2.8166884
1370	2	44071625	44071625	C	A	intronic	ABCG8	NA	NA	NA	intronic	ENSG00000143921	NA	NA	NA	NA	NA	2p21	NA	NA	NA	NA	rs4148209	0.44	0.44	0.397	0.434505	0.3708	0.8512	0.3501	0.1293	0.5429	0.39	0.86	0.32	0.12	0.4295	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.970874	NA	NA	0.383721	0.194961	NA	0.304	NA	2.815979
1370	19	3823237	3823237	G	A	intronic	ZFR2	NA	NA	NA	intronic	ENSG00000105278	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs2240231	0.41	0.41	0.406	0.370407	0.4175	0.4117	0.415	0.4032	0.2035	0.41	0.41	0.43	0.41	0.3751	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.947776	NA	NA	0.391478	0.404532	NA	0.384	NA	2.815922
1370	8	16942849	16942849	C	T	intronic	MICU3	NA	NA	NA	intronic	ENSG00000155970	NA	NA	NA	NA	NA	8p22	NA	NA	NA	NA	rs2285265	0.47	0.47	0.468	0.485423	0.3917	0.4355	0.4352	0.5953	0.5204	0.39	0.45	0.45	0.63	0.4229	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.467056	NA	NA	0.369884	0.536768	NA	0.428	NA	2.815516
1370	15	27890589	27890589	A	G	intergenic	GABRG3,OCA2	dist=112216;dist=109434	NA	NA	intergenic	ENSG00000258594,ENSG00000258853	dist=16154;dist=39055	NA	NA	NA	NA	15q12	NA	NA	NA	NA	rs1871018	0.56	0.56	0.554	0.58726	0.5179	0.7768	0.5259	0.4811	0.6503	0.52	0.76	0.46	0.47	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.561366	NA	NA	NA	NA	NA	0.565	NA	2.8154334
1370	13	111154159	111154159	C	T	intronic	COL4A2	NA	NA	NA	intronic	ENSG00000134871	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs388222	0.47	0.47	0.451	0.428714	0.3936	0.6151	0.4914	0.348	0.3374	0.41	0.65	0.49	0.33	0.4095	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.368645	NA	NA	0.381504	0.325111	NA	0.355	NA	2.815396
1370	4	7726847	7726847	A	G	intronic	SORCS2	NA	NA	NA	intronic	ENSG00000184985	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs2285777	0.38	0.38	0.364	0.393171	0.4225	0.4425	0.2752	0.3601	0.4407	0.41	0.41	0.32	0.35	0.3776	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.15412	NA	NA	0.384661	0.351897	NA	0.312	NA	2.815239
1371	9	35650458	35650458	G	A	intronic	SIT1	NA	NA	NA	intronic	ENSG00000137078	NA	NA	NA	NA	NA	9p13.3	NA	NA	Name=32	NA	rs2297880	0.62	0.62	0.581	0.608027	0.7366	0.5605	0.6398	0.5507	0.5798	0.72	0.54	0.62	0.54	0.6978	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.591039	NA	NA	0.75093	0.560826	NA	0.58	NA	2.81467
1371	8	138296103	138296103	G	C	intergenic	KHDRBS3,FAM135B	dist=1636255;dist=846163	NA	NA	intergenic	ENSG00000206678,ENSG00000254076	dist=178402;dist=412864	NA	NA	NA	NA	8q24.23	NA	NA	NA	NA	rs12334717	0.58	0.58	0.554	0.625	0.5189	0.6815	0.6614	0.5537	0.7464	0.51	0.72	0.62	0.5	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.265062	NA	NA	NA	NA	NA	0.739	NA	2.8144334
1371	9	33060416	33060416	C	T	intronic	SMU1	NA	NA	NA	intronic	ENSG00000122692	NA	NA	NA	NA	NA	9p21.1	NA	NA	NA	NA	rs1537041	0.37	0.37	0.354	0.329073	0.4125	0.2857	0.3948	0.3215	0.2515	0.42	0.31	0.41	0.34	0.3618	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.270156	NA	NA	0.411607	0.312528	NA	0.442	NA	2.814093
1371	1	43869235	43869235	G	C	intronic	SZT2	NA	NA	NA	intronic	ENSG00000198198	NA	NA	NA	NA	NA	1p34.2	NA	NA	NA	NA	rs710249	0.3	0.3	0.269	0.242212	0.4215	0.1062	0.3934	0.2345	0.1012	0.43	0.11	0.42	0.25	0.3425	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.816901	NA	NA	0.422209	0.284839	NA	0.384	NA	2.813791
1371	5	169138909	169138909	G	A	intronic	DOCK2	NA	NA	NA	intronic	ENSG00000134516	NA	NA	NA	NA	NA	5q35.1	NA	NA	NA	NA	rs2306558	0.37	0.37	0.351	0.329273	0.4125	0.5913	0.2752	0.0877	0.3384	0.38	0.59	0.31	0.12	0.3679	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.458771	NA	NA	0.406163	0.145256	NA	0.37	NA	2.813437
1371	18	28923984	28923984	T	A	intronic	DSG1	NA	NA	NA	ncRNA_intronic	ENSG00000266729	NA	NA	NA	NA	NA	18q12.1	NA	NA	NA	NA	rs6506918	0.53	0.53	0.342	0.648962	0.6163	0.3095	0.4395	0.9743	0.7413	0.51	0.31	0.46	0.89	0.6086	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.252036	NA	NA	0.295275	0.760554	NA	0.225	NA	2.8131583
1371	6	132644035	132644035	G	A	intronic	MOXD1	NA	NA	NA	intronic	ENSG00000079931	NA	NA	NA	NA	NA	6q23.2	NA	NA	NA	NA	rs604196	0.56	0.56	0.588	0.609425	0.3499	0.6637	0.4539	0.854	0.6002	0.35	0.67	0.44	0.85	0.4745	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.274646	1.274646	NA	0.363224	0.783704	NA	0.659	NA	2.812376
1371	20	31624368	31624368	C	T	intronic	BPIFB6	NA	NA	NA	intronic	ENSG00000167104	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs6059035	0.49	0.49	0.459	0.508986	0.3907	0.7232	0.4669	0.4251	0.5532	0.39	0.71	0.44	0.41	0.4222	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.497055	NA	NA	0.374767	0.409442	NA	0.449	NA	2.812333
1371	4	169931268	169931268	G	A	UTR5	CBR4	NM_032783:c.-28C>T	NA	NA	UTR5	ENSG00000145439	ENST00000510042:c.-28C>T,ENST00000306193:c.-28C>T,ENST00000504480:c.-28C>T,ENST00000506808:c.-28C>T,ENST00000507752:c.-28C>T	NA	NA	NA	NA	4q32.3	NA	Name=Pol2-4H8,TAF7_(SQ-8),Pol2(phosphoS2),Pol2,TAF1,CTCF,HEY1	NA	NA	rs28371817	0.84	0.84	0.849	0.809904	0.8588	0.998	0.7839	0.6203	0.8405	0.87	1	0.77	0.68	0.8307	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.536573	NA	NA	0.831512	0.662506	NA	0.746	NA	2.8123214
1371	1	120378678	120378678	C	T	exonic	NBPF7	NA	synonymous SNV	NBPF7:NM_001047980:exon7:c.G1068A:p.Q356Q	ncRNA_exonic	ENSG00000215864	NA	NA	NA	NA	NA	1p12	NA	NA	NA	NA	rs3009182	0.63	0.63	0.607	0.628395	0.8121	0.4673	0.7118	0.4107	0.8405	0.82	0.51	0.75	0.4	0.7508	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.205345	NA	NA	0.791546	0.477319	NA	0.717	NA	2.8122206
1371	20	31622768	31622768	C	A	intronic	BPIFB6	NA	NA	NA	intronic	ENSG00000167104	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs6059032	0.49	0.49	0.456	0.507987	0.3907	0.7222	0.4654	0.4244	0.5511	0.39	0.71	0.44	0.42	0.4225	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.563589	NA	NA	0.374651	0.407399	NA	0.449	NA	2.812149
1371	10	118404620	118404620	A	G	UTR3	PNLIPRP2	NM_005396:c.*12A>G	NA	NA	UTR3	ENSG00000165862	ENST00000537242:c.*12A>G	NA	NA	NA	NA	10q25.3	NA	NA	NA	NA	rs2301179	0.48	0.48	0.462	0.470847	0.5229	0.2688	0.4496	0.6203	0.4387	0.53	0.27	0.48	0.64	0.4954	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.278714	NA	NA	0.503277	0.62361	NA	0.377	NA	2.8117564
1371	3	130748733	130748733	A	G	intronic	NEK11	NA	NA	NA	intronic	ENSG00000114670	NA	NA	NA	NA	NA	3q22.1	NA	NA	NA	NA	rs9864242	0.27	0.27	0.256	0.244209	0.4215	0.2599	0.3732	0.0212	0.2556	0.4	0.26	0.38	0.03	0.3512	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.078556	NA	NA	0.41593	0.078302	NA	0.268	NA	2.81137
1371	1	183084608	183084608	C	A	intronic	LAMC1	NA	NA	NA	intronic	ENSG00000135862	NA	NA	NA	NA	NA	1q25.3	NA	NA	NA	NA	rs2027082	0.45	0.45	0.029	0.530351	0.5636	0.628	0.6254	0.3268	0.6033	0.48	0.52	0.52	0.27	0.5695	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.442149	NA	NA	0.055581	0.034271	NA	NA	NA	2.811319
1371	1	245245378	245245378	T	C	intronic	EFCAB2	NA	NA	NA	intronic	ENSG00000203666	NA	NA	NA	NA	NA	1q44	NA	NA	NA	NA	rs10927386	0.32	0.32	0.329	0.301717	0.4463	0.1935	0.2853	0.2943	0.2863	0.43	0.22	0.31	0.3	0.3477	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.243563	NA	NA	0.395116	0.287335	ID=COSM146845;OCCURENCE=1(stomach)	0.362	NA	2.810884
1371	20	4155948	4155948	G	A	intronic	SMOX	NA	NA	NA	intronic	ENSG00000088826	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs1741315	0.34	0.34	0.299	0.282748	0.3867	0.4355	0.389	0.1074	0.18	0.42	0.4	0.37	0.12	0.3783	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.354618	3.354618	NA	0.424302	0.169315	ID=COSN166472;OCCURENCE=1(NS),1(haematopoietic_and_lymphoid_tissue),1(large_intestine)	0.232	NA	2.810698
1371	5	149497177	149497177	T	C	intronic	PDGFRB	NA	NA	NA	intronic	ENSG00000113721	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs246391	0.3	0.3	0.291	0.298922	0.3966	0.1071	0.3228	0.3525	0.3067	0.4	0.1	0.34	0.34	0.3564	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.256692	NA	NA	0.436744	0.359737	ID=COSM149994;OCCURENCE=1(stomach)	0.304	NA	2.810256
1371	1	68943665	68943665	T	G	intronic	DEPDC1	NA	NA	NA	intronic	ENSG00000024526	NA	NA	NA	NA	NA	1p31.2	NA	NA	NA	NA	rs12119046	0.27	0.27	0.285	0.26877	0.4264	0.0317	0.3098	0.323	0.2485	0.39	0.03	0.35	0.29	0.3361	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.647274	NA	NA	0.427607	0.33636	NA	0.254	NA	2.809893
1371	7	91674302	91674302	G	A	intronic	AKAP9	NA	NA	NA	intronic	ENSG00000127914	NA	NA	NA	NA	NA	7q21.2	NA	NA	NA	NA	rs9785013	0.41	0.41	0.43	0.428514	0.3877	0.1825	0.3689	0.6793	0.4274	0.39	0.19	0.39	0.7	0.3993	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.352875	NA	NA	0.40314	0.639355	NA	0.493	NA	2.80986
1371	14	93182466	93182466	G	A	intronic	LGMN	NA	NA	NA	intronic	ENSG00000100600	NA	NA	NA	NA	NA	14q32.12	NA	NA	NA	NA	rs1242119	0.25	0.25	0.206	0.228634	0.4225	0.0923	0.5317	0.053	0.1922	0.41	0.08	0.46	0.05	0.3575	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.164077	NA	NA	0.411395	0.104176	NA	0.225	NA	2.808605
1371	3	75388243	75388243	T	C	intergenic	MIR4444-1,FAM86DP	dist=124544;dist=82460	NA	NA	upstream	ENSG00000228868	NA	NA	NA	NA	NA	3p12.3	NA	NA	NA	NA	rs6798065	0.68	0.68	0.651	0.63738	0.6918	0.8294	0.7594	0.3744	0.6524	0.69	0.85	0.73	0.41	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.017371	NA	NA	NA	NA	NA	0.681	NA	2.8082
1371	19	36276403	36276403	T	G	intronic	ARHGAP33	NA	NA	NA	intronic	ENSG00000004777	NA	NA	NA	NA	NA	19q13.12	NA	NA	NA	NA	rs120959	0.57	0.57	0.55	0.563698	0.3688	0.7272	0.5922	0.6846	0.4121	0.37	0.74	0.57	0.7	0.4605	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.419041	NA	NA	0.362558	0.627157	NA	0.551	NA	2.808142
1371	21	31973405	31973405	C	T	upstream	KRTAP22-1	NA	NA	NA	upstream	ENSG00000186924	NA	NA	NA	NA	NA	21q22.11	NA	NA	NA	NA	rs198914	0.25	0.25	0.234	0.21226	0.2913	0.2986	0.2767	0.0582	0.2045	0.3	0.3	0.28	0.08	0.2742	0.3	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.72004	NA	NA	0.293256	0.109169	ID=COSN166631;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.159	NA	2.8079106
1371	10	99153540	99153540	T	G	intronic	RRP12	NA	NA	NA	intronic	ENSG00000052749	NA	NA	NA	NA	NA	10q24.1	NA	NA	NA	NA	rs7898743	0.47	0.47	0.51	0.502596	0.3857	0.4623	0.4121	0.6725	0.499	0.39	0.44	0.39	0.71	0.4215	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.318763	1.318763	NA	0.385465	0.603722	NA	0.428	NA	2.807335
1371	15	91430617	91430617	G	A	intronic	FES	NA	NA	NA	intronic	ENSG00000182511	NA	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs2071384	0.45	0.45	0.413	0.453674	0.3748	0.7817	0.5764	0.1278	0.5501	0.36	0.81	0.54	0.12	0.4634	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.590786	NA	NA	0.35488	0.165516	NA	0.348	NA	2.80692
1371	8	143998662	143998662	G	A	intronic	CYP11B2	NA	NA	NA	intronic	ENSG00000179142	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs13276226	0.26	0.26	0.238	0.223642	0.4095	0.1577	0.3098	0.0295	0.3016	0.42	0.15	0.36	0.05	0.3488	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.517308	NA	NA	0.435116	0.09192	NA	0.225	NA	2.806584
1371	12	108203513	108203513	C	T	intergenic	ASCL4,LOC728739	dist=33092;dist=93414	NA	NA	intergenic	ENSG00000263632,ENSG00000257141	dist=10016;dist=23122	NA	NA	NA	NA	12q23.3	NA	NA	NA	NA	rs10861793	0.42	0.42	0.427	0.414137	0.5268	0.1508	0.4179	0.6067	0.3067	0.52	0.12	0.46	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.036531	NA	NA	NA	NA	NA	0.399	NA	2.8065334
1371	12	108203599	108203599	T	A	intergenic	ASCL4,LOC728739	dist=33178;dist=93328	NA	NA	intergenic	ENSG00000263632,ENSG00000257141	dist=10102;dist=23036	NA	NA	NA	NA	12q23.3	NA	NA	NA	NA	rs10861794	0.42	0.42	0.43	0.414137	0.5268	0.1508	0.4179	0.6067	0.3067	0.52	0.12	0.46	0.6	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.643556	NA	NA	NA	NA	NA	0.406	NA	2.8065334
1371	4	44626846	44626846	G	A	intronic	YIPF7	NA	NA	NA	intronic	ENSG00000177752	NA	NA	NA	NA	NA	4p12	NA	NA	NA	NA	rs6838327	0.52	0.52	0.544	0.552117	0.4095	0.5595	0.4625	0.6884	0.5706	0.4	0.56	0.46	0.7	0.4198	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.479391	NA	NA	0.364172	0.611196	NA	0.377	NA	2.806528
1371	11	67264679	67264679	C	T	intronic	PITPNM1	NA	NA	NA	intronic	ENSG00000110697	NA	NA	NA	NA	NA	11q13.2	NA	NA	NA	NA	rs2276120	0.31	0.31	0.265	0.291933	0.3986	0.1925	0.4885	0.2095	0.2566	0.4	0.17	0.48	0.21	0.3862	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.303043	NA	NA	0.408677	0.227418	NA	0.333	NA	2.806523
1371	22	43442599	43442599	T	C	intronic	TTLL1	NA	NA	NA	ncRNA_intronic	ENSG00000230319	NA	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs5759111	0.67	0.67	0.671	0.686901	0.4612	0.8343	0.7133	0.829	0.5562	0.46	0.81	0.69	0.84	0.5713	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.434059	NA	NA	0.494535	0.783931	NA	0.58	NA	2.8062983
1371	7	91707197	91707197	C	T	intronic	AKAP9	NA	NA	NA	intronic	ENSG00000127914	NA	NA	NA	NA	NA	7q21.2	NA	NA	NA	NA	rs733957	0.36	0.36	0.35	0.36242	0.3857	0.1617	0.3559	0.466	0.41	0.39	0.17	0.38	0.5	0.4076	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.145749	NA	NA	0.400442	0.478844	NA	0.297	NA	2.806258
1371	13	53287023	53287023	G	C	intronic	LECT1	NA	NA	NA	intronic	ENSG00000136110	NA	NA	NA	NA	NA	13q14.3	NA	NA	NA	NA	rs2147692	0.3	0.3	0.252	0.262979	0.4364	0.2073	0.366	0.1445	0.229	0.42	0.2	0.36	0.17	0.3606	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.033728	NA	NA	0.396977	0.179982	NA	0.196	NA	2.806023
1371	7	100695058	100695058	T	C	intronic	MUC17	NA	NA	NA	intronic	ENSG00000169876	NA	NA	NA	NA	NA	7q22.1	NA	Name=ZNF263	NA	NA	rs6966570	0.79	0.79	0.832	0.79972	0.7346	0.8413	0.5548	0.9539	0.7894	0.74	0.82	0.61	0.95	0.7344	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.452847	NA	NA	0.725698	0.913527	NA	0.754	NA	2.805302
1371	18	43666952	43666952	C	A	intronic	ATP5A1	NA	NA	NA	intronic	ENSG00000152234	NA	NA	NA	NA	NA	18q21.1	NA	NA	NA	NA	rs8097521	0.26	0.26	0.272	0.316294	0.3917	0.0635	0.317	0.3684	0.4284	0.36	0.05	0.28	0.33	0.3858	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.311677	NA	NA	0.417249	0.360455	NA	0.478	NA	2.805251
1371	7	142161763	142161763	T	C	intergenic	LOC730441,MTRNR2L6	dist=189695;dist=212368	NA	NA	downstream	ENSG00000211724	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs361446	0.66	0.66	0.646	0.622404	0.6948	0.7927	0.5403	0.4758	0.6288	0.7	0.82	0.56	0.47	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.153186	NA	NA	NA	NA	NA	0.587	NA	2.8052
1371	17	40639422	40639422	G	A	intronic	ATP6V0A1	NA	NA	NA	intronic	ENSG00000033627	NA	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs8069972	0.39	0.39	0.371	0.337061	0.4195	0.5516	0.4352	0.0726	0.319	0.41	0.56	0.47	0.1	0.378	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.271848	NA	NA	0.397326	0.129823	NA	0.232	NA	2.805174
1371	6	70873331	70873331	G	A	intronic	COL19A1	NA	NA	NA	intronic	ENSG00000082293	NA	NA	NA	NA	NA	6q13	NA	NA	NA	NA	rs2296010	0.34	0.34	0.352	0.354832	0.4115	0.252	0.33	0.3381	0.4427	0.41	0.26	0.33	0.35	0.3896	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.346192	1.346192	NA	0.393837	0.353609	NA	0.37	NA	2.805063
1372	10	99437822	99437822	A	G	intronic	AVPI1	NA	NA	NA	intronic	ENSG00000119986	NA	NA	NA	NA	NA	10q24.2	NA	NA	NA	NA	rs3750564	0.47	0.47	0.47	0.508586	0.3579	0.4772	0.4395	0.6967	0.4908	0.36	0.46	0.41	0.69	0.4393	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.341929	NA	NA	0.398256	0.646845	ID=COSN163730;OCCURENCE=1(breast)	0.543	NA	2.804544
1372	1	42414686	42414686	A	G	intergenic	HIVEP3,NONE	dist=30308;dist=NONE	NA	NA	intergenic	ENSG00000127124,ENSG00000227538	dist=30308;dist=91582	NA	NA	NA	NA	1p34.2	NA	NA	NA	NA	rs10789411	0.47	0.47	0.49	0.455671	0.5288	0.6895	0.304	0.2352	0.545	0.51	0.69	0.33	0.26	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.638221	NA	NA	NA	NA	NA	0.391	NA	2.8045334
1372	3	153994502	153994502	T	C	intronic	DHX36	NA	NA	NA	intronic	ENSG00000174953	NA	NA	NA	NA	NA	3q25.2	NA	NA	Name=2	NA	rs355787	0.63	0.63	0.612	0.674321	0.7684	0.631	0.634	0.5749	0.7853	0.73	0.57	0.62	0.55	0.7216	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.299131	NA	NA	0.706047	0.542215	NA	0.413	NA	2.803953
1372	19	36273230	36273230	C	G	intronic	ARHGAP33	NA	NA	NA	intronic	ENSG00000004777	NA	NA	NA	NA	NA	19q13.12	NA	NA	NA	NA	rs231223	0.54	0.54	0.51	0.543331	0.3698	0.627	0.5922	0.6846	0.41	0.37	0.62	0.57	0.69	0.4602	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.271919	NA	NA	0.366047	0.633908	NA	0.551	NA	2.803953
1372	14	106471534	106471534	A	G	intergenic	ADAM6,LINC00226	dist=33176;dist=272735	NA	NA	exonic	ENSG00000211935	NA	synonymous SNV	ENSG00000211935:ENST00000390595:exon2:c.T63C:p.V21V	NA	NA	14q32.33	NA	NA	NA	NA	rs36065697	0.49	0.49	0.463	0.605631	0.5944	0.7361	0.5706	0.438	0.7342	0.48	0.66	0.46	0.31	0.515	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.264782	NA	NA	0.587325	0.463382	NA	0.413	NA	2.803275
1372	10	120692835	120692835	C	T	intergenic	CACUL1,NANOS1	dist=178077;dist=96393	NA	NA	upstream	ENSG00000213574	NA	NA	NA	NA	NA	10q26.11	NA	NA	NA	NA	rs10787881	0.61	0.61	0.563	0.557907	0.6968	0.7688	0.6729	0.1823	0.6237	0.71	0.78	0.66	0.21	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.969986	NA	NA	NA	NA	NA	0.616	NA	2.8032
1372	1	201331554	201331554	T	G	intronic	TNNT2	NA	NA	NA	intronic	ENSG00000118194	NA	NA	NA	Score=476;Name=lod=115	NA	1q32.1	NA	NA	NA	NA	rs1104859	0.72	0.72	0.713	0.742212	0.7445	0.5268	0.7983	0.7995	0.8446	0.74	0.56	0.81	0.8	0.7335	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.43694	2.43694	NA	0.719186	0.763277	NA	0.819	NA	2.802814
1372	2	69586370	69586370	A	G	intronic	GFPT1	NA	NA	NA	intronic	ENSG00000198380	NA	NA	NA	NA	NA	2p13.3	NA	NA	NA	NA	rs67760762	0.26	0.26	0.23	0.24401	0.4095	0.2103	0.3559	0.0272	0.3221	0.41	0.19	0.36	0.03	0.3655	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.79905	NA	NA	0.422791	0.089424	NA	0.312	NA	2.802209
1372	7	142157358	142157358	A	G	intergenic	LOC730441,MTRNR2L6	dist=185290;dist=216773	NA	NA	downstream	ENSG00000227550	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs361399	0.7	0.7	0.679	0.690296	0.6978	0.7927	0.5749	0.7118	0.6299	0.7	0.81	0.6	0.66	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.069149	NA	NA	NA	NA	NA	0.645	NA	2.8022
1372	6	109993291	109993291	G	A	intronic	AK9	NA	NA	NA	intronic	ENSG00000155085	NA	NA	NA	NA	NA	6q21	NA	NA	NA	NA	rs12197838	0.37	0.37	0.337	0.349441	0.4095	0.377	0.4063	0.1694	0.4622	0.41	0.45	0.4	0.17	0.3931	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.301537	NA	NA	0.395858	0.201997	NA	0.29	NA	2.801542
1372	4	190076486	190076486	C	T	intergenic	LOC401164,FRG1	dist=553424;dist=785488	NA	NA	intergenic	ENSG00000250024,ENSG00000251310	dist=153257;dist=37768	NA	NA	NA	NA	4q35.2	NA	NA	NA	NA	rs6818132	NA	NA	0.354	0.517173	0.5318	0.5377	0.5389	0.475	0.5225	NA	NA	NA	NA	NA	0.065	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.440217	NA	NA	NA	NA	NA	0.058	NA	2.8015334
1372	5	178996435	178996435	A	G	intronic	RUFY1	NA	NA	NA	intronic	ENSG00000176783	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs11743261	0.49	0.49	0.486	0.488618	0.3658	0.7312	0.513	0.3956	0.4734	0.35	0.74	0.51	0.4	0.4461	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.08464	4.08464	NA	0.38686	0.395597	NA	0.406	NA	2.80124
1372	6	31113275	31113275	A	G	intronic	CCHCR1	NA	NA	NA	intronic	ENSG00000204536	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs886401	0.42	0.42	0.035	0.516973	0.5636	0.3512	0.5	0.6248	0.5061	0.45	0.31	0.46	0.49	0.6048	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.810664	NA	NA	0.030465	0.040853	NA	NA	NA	2.801135
1372	5	7927668	7927668	C	G	intergenic	MTRR,LOC729506	dist=26433;dist=405928	NA	NA	intergenic	ENSG00000251168,ENSG00000199773	dist=2157;dist=52591	NA	NA	NA	NA	5p15.31	NA	NA	NA	NA	rs60293486	0.46	0.46	0.417	0.476837	0.5328	0.503	0.4539	0.2761	0.68	0.53	0.48	0.49	0.29	NA	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.560021	NA	NA	NA	NA	NA	0.42	NA	2.8005334
1372	10	134884546	134884546	A	G	intergenic	LOC399829,GPR123	dist=94545;dist=16863	NA	NA	exonic	ENSG00000197177	NA	synonymous SNV	ENSG00000197177:ENST00000607359:exon1:c.A114G:p.T38T	NA	NA	10q26.3	NA	NA	NA	NA	rs4576736	0.61	0.61	0.61	0.623802	0.5716	0.6558	0.536	0.6657	0.6503	0.58	0.68	0.56	0.62	0.5824	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.527997	NA	NA	0.545531	0.653329	NA	0.645	NA	2.800469
1372	7	618869	618869	G	A	intronic	PRKAR1B	NA	NA	NA	intronic	ENSG00000188191	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs62431412	0.39	0.39	0.374	0.353634	0.4414	0.2688	0.33	0.5083	0.1585	0.44	0.25	0.35	0.5	0.3643	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.015854	NA	NA	0.393971	0.479573	NA	0.442	NA	2.800329
1372	10	37447358	37447358	T	G	intronic	ANKRD30A	NA	NA	NA	intronic	ENSG00000148513	NA	NA	NA	NA	NA	10p11.21	NA	NA	NA	NA	rs1200881	0.42	0.42	0.348	0.322085	0.4344	0.2004	0.3847	0.4266	0.1462	0.48	0.22	0.49	0.48	0.3571	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.373263	NA	NA	0.408198	0.429402	NA	0.333	NA	2.800302
1372	7	618855	618855	T	C	intronic	PRKAR1B	NA	NA	NA	intronic	ENSG00000188191	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs62431411	0.39	0.39	0.368	0.353634	0.4414	0.2698	0.33	0.5076	0.1585	0.44	0.25	0.35	0.5	0.3644	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.2514	NA	NA	0.394088	0.479573	NA	0.457	NA	2.800112
1372	8	145692762	145692762	G	T	intronic	KIFC2	NA	NA	NA	intronic	ENSG00000167702	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs2291133	0.31	0.31	0.295	0.302117	0.4165	0.254	0.3156	0.1619	0.4141	0.42	0.29	0.29	0.17	0.3741	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.517966	1.517966	NA	0.409408	0.209186	NA	0.348	NA	2.799992
1372	4	38995310	38995310	A	G	intronic	TMEM156	NA	NA	NA	intronic	ENSG00000121895	NA	NA	NA	NA	NA	4p14	NA	NA	NA	NA	rs11721954	0.42	0.42	0.4	0.408946	0.4006	0.623	0.3876	0.2095	0.4816	0.4	0.63	0.35	0.24	0.4036	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.631172	NA	NA	0.396022	0.231153	NA	0.464	NA	2.799778
1372	22	45937061	45937061	G	A	intronic	FBLN1	NA	NA	NA	intronic	ENSG00000077942	NA	NA	NA	NA	NA	22q13.31	NA	NA	NA	NA	rs136756	0.29	0.29	0.302	0.260383	0.4274	0.1825	0.2579	0.2156	0.2311	0.43	0.17	0.29	0.21	0.3572	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.558572	NA	NA	0.415814	0.245574	NA	0.355	NA	2.799586
1372	10	134884516	134884516	G	A	intergenic	LOC399829,GPR123	dist=94515;dist=16893	NA	NA	exonic	ENSG00000197177	NA	synonymous SNV	ENSG00000197177:ENST00000607359:exon1:c.G84A:p.A28A	NA	NA	10q26.3	NA	NA	NA	NA	rs4271312	0.61	0.61	0.613	0.623203	0.5716	0.6567	0.536	0.6619	0.6513	0.58	0.68	0.56	0.62	0.5834	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.066508	NA	NA	0.545429	0.650799	NA	0.652	NA	2.799571
1372	20	44174423	44174423	G	A	intronic	EPPIN,EPPIN-WFDC6	NA	NA	NA	exonic	ENSG00000101448	NA	synonymous SNV	ENSG00000101448:ENST00000336443:exon1:c.C30T:p.T10T	NA	NA	20q13.12	NA	NA	NA	NA	rs765156	0.67	0.67	0.667	0.670927	0.6819	0.6329	0.7493	0.7216	0.5746	0.69	0.62	0.72	0.67	0.6759	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.190447	NA	NA	0.676047	0.720835	NA	0.754	NA	2.7994863
1372	18	7034464	7034464	T	A	intronic	LAMA1	NA	NA	NA	intronic	ENSG00000101680	NA	NA	NA	NA	NA	18p11.31	NA	NA	NA	NA	rs674733	0.4	0.4	0.389	0.405751	0.4046	0.131	0.3905	0.7065	0.2945	0.41	0.16	0.36	0.71	0.3966	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.824562	NA	NA	0.399419	0.636859	NA	0.42	NA	2.799381
1372	11	43772549	43772549	A	G	intronic	HSD17B12	NA	NA	NA	intronic	ENSG00000149084	NA	NA	NA	NA	NA	11p11.2	NA	NA	NA	NA	rs12801203	0.41	0.41	0.392	0.36222	0.3917	0.6736	0.3429	0.0991	0.3804	0.4	0.73	0.33	0.1	0.4141	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.107263	NA	NA	0.394964	0.158893	NA	0.225	NA	2.799236
1372	6	152461061	152461061	G	A	intronic	SYNE1	NA	NA	NA	intronic	ENSG00000131018	NA	NA	NA	NA	NA	6q25.1	NA	NA	NA	NA	rs3818110	0.41	0.41	0.351	0.444489	0.4046	0.2966	0.5389	0.5492	0.4294	0.38	0.27	0.54	0.54	0.4023	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.497153	NA	NA	0.39407	0.527463	NA	0.246	NA	2.79903
1372	19	57665750	57665750	T	C	UTR3	DUXA	NM_001012729:c.*30A>G	NA	NA	UTR3	ENSG00000258873	ENST00000554048:c.*30A>G	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs8108591	0.42	0.42	0.402	0.422923	0.5109	0.3085	0.4625	0.3548	0.5143	0.5	0.3	0.51	0.35	0.4909	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.225273	NA	NA	0.532558	0.397186	NA	0.341	NA	2.7989754
1372	19	39976969	39976969	T	C	intronic	TIMM50	NA	NA	NA	intronic	ENSG00000105197	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs1865094	0.38	0.38	0.36	0.40615	0.4046	0.3988	0.3833	0.3215	0.546	0.41	0.37	0.41	0.31	0.4155	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.237971	NA	NA	0.38093	0.351793	NA	0.297	NA	2.79897
1372	1	203465396	203465396	T	C	intronic	OPTC	NA	NA	NA	intronic	ENSG00000188770	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs2242199	0.39	0.39	0.35	0.385184	0.4125	0.4692	0.3487	0.2912	0.4233	0.41	0.46	0.34	0.3	0.4039	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.227653	NA	NA	0.384651	0.317522	NA	0.486	NA	2.798949
1372	8	143921804	143921804	C	T	intronic	GML	NA	NA	NA	intronic	ENSG00000104499	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs3750246	0.29	0.29	0.265	0.286142	0.4314	0.2887	0.4395	0.0325	0.3681	0.42	0.28	0.39	0.03	0.3653	0.42	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.910183	NA	NA	0.405	0.105538	NA	0.297	NA	2.7983
1372	10	37441072	37441072	T	G	intronic	ANKRD30A	NA	NA	NA	intronic	ENSG00000148513	NA	NA	NA	NA	NA	10p11.21	NA	NA	NA	NA	rs1148257	0.37	0.37	0.322	0.32528	0.4344	0.2004	0.3847	0.4372	0.1483	0.44	0.2	0.42	0.41	0.3601	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.066312	NA	NA	0.407366	0.4399	NA	0.341	NA	2.798134
1372	12	52711416	52711416	A	G	intronic	KRT83	NA	NA	NA	intronic	ENSG00000170523	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs2852460	0.36	0.36	0.352	0.375799	0.4095	0.1885	0.317	0.5008	0.407	0.4	0.19	0.33	0.51	0.3827	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.98256	NA	NA	0.41	0.489106	NA	0.406	NA	2.7978
1372	14	23282699	23282699	A	T	intronic	SLC7A7	NA	NA	NA	intronic	ENSG00000155465	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs3829407	0.64	0.64	0.624	0.60603	0.5964	0.7857	0.7104	0.4947	0.5072	0.6	0.8	0.7	0.48	0.6062	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.47718	NA	NA	NA	NA	NA	0.493	NA	2.7974
1372	12	52710246	52710246	T	C	intronic	KRT83	NA	NA	NA	intronic	ENSG00000170523	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs2270267	0.36	0.36	0.358	0.375599	0.4095	0.1885	0.317	0.5008	0.4059	0.4	0.19	0.33	0.51	0.3826	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.6554	NA	NA	0.410581	0.489333	ID=COSM147522;OCCURENCE=1(stomach)	0.428	NA	2.797319
1372	6	44253749	44253749	A	G	exonic	TCTE1	NA	synonymous SNV	TCTE1:NM_182539:exon3:c.T798C:p.R266R	exonic	ENSG00000146221	NA	synonymous SNV	ENSG00000146221:ENST00000371504:exon1:c.T339C:p.R113R,ENSG00000146221:ENST00000371503:exon3:c.T339C:p.R113R,ENSG00000146221:ENST00000371505:exon3:c.T798C:p.R266R	NA	NA	6p21.1	NA	NA	NA	NA	rs324143	0.9	0.9	0.883	0.879792	0.9612	0.9851	0.9424	0.6498	0.954	0.96	0.98	0.94	0.67	0.9435	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.148411	NA	NA	0.964884	0.712892	NA	0.855	NA	2.7970826
1372	6	44268371	44268371	T	C	exonic	AARS2	NA	synonymous SNV	AARS2:NM_020745:exon22:c.A2871G:p.S957S	exonic	ENSG00000124608	NA	synonymous SNV	ENSG00000124608:ENST00000244571:exon22:c.A2871G:p.S957S	NA	NA	6p21.1	NA	NA	NA	NA	rs325008	0.89	0.89	0.874	0.869409	0.9612	0.998	0.9496	0.5976	0.953	0.96	1	0.95	0.6	0.9426	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.65973	NA	NA	0.966047	0.685883	NA	0.855	NA	2.7968196
1372	9	4850436	4850436	G	T	intronic	RCL1	NA	NA	NA	intronic	ENSG00000120158	NA	NA	NA	NA	NA	9p24.1	NA	NA	NA	NA	rs462480	0.6	0.6	0.598	0.554912	0.6014	0.745	0.5216	0.5023	0.4059	0.59	0.72	0.56	0.5	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.477156	NA	NA	0.601823	0.529624	NA	0.536	NA	2.796777
1372	6	25924158	25924158	T	C	intronic	SLC17A2	NA	NA	NA	intronic	ENSG00000112337	NA	NA	NA	NA	NA	6p22.2	NA	NA	NA	NA	rs1540273	0.43	0.43	0.376	0.39976	0.4026	0.6954	0.4568	0.143	0.3988	0.39	0.71	0.41	0.16	0.4113	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.628789	NA	NA	0.389884	0.18611	NA	0.246	NA	2.796216
1372	12	52711776	52711776	G	A	intronic	KRT83	NA	NA	NA	intronic	ENSG00000170523	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs2852459	0.36	0.36	0.367	0.376198	0.4105	0.1885	0.3213	0.4992	0.407	0.4	0.19	0.34	0.51	0.3831	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.480519	NA	NA	0.410233	0.488652	ID=COSN164259;OCCURENCE=1(breast)	0.42	NA	2.796167
1372	9	740972	740972	G	C	intronic	KANK1	NA	NA	NA	intronic	ENSG00000107104	NA	NA	NA	NA	NA	9p24.3	NA	NA	NA	NA	rs7032867	0.35	0.35	0.373	0.375799	0.4195	0.1815	0.2723	0.4864	0.455	0.41	0.16	0.29	0.52	0.3869	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.900579	NA	NA	0.397674	0.475942	NA	0.384	NA	2.795926
1372	2	169763148	169763148	T	C	intronic	G6PC2	NA	NA	NA	intronic	ENSG00000152253,ENSG00000152254	NA	NA	NA	NA	Name=Metabolite levels,Fasting glucose-related traits (interaction with BMI),Metabolic syndrome,Fasting plasma glucose,Metabolic traits,Fasting glucose-related traits	2q31.1	NA	NA	NA	NA	rs560887	0.85	0.85	0.859	0.886981	0.7008	0.9782	0.8127	0.9894	0.8988	0.69	0.97	0.79	0.99	0.7894	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.447869	2.447869	NA	0.71407	0.944621	NA	0.783	NA	2.79573
1373	8	72966124	72966124	A	G	ncRNA_exonic	LOC100132891	NA	NA	NA	intronic	ENSG00000104321,ENSG00000235531	NA	NA	NA	NA	NA	8q13.3	NA	NA	NA	NA	rs3735944	0.56	0.56	0.501	0.580671	0.4791	0.6905	0.6686	0.5091	0.6063	0.49	0.7	0.62	0.47	0.5672	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.156658	NA	NA	0.492326	0.509305	NA	0.558	NA	2.7947073
1373	6	44247951	44247951	T	G	exonic	TCTE1	NA	synonymous SNV	TCTE1:NM_182539:exon5:c.A1473C:p.I491I	exonic	ENSG00000146221	NA	synonymous SNV	ENSG00000146221:ENST00000371504:exon2:c.A564C:p.I188I,ENSG00000146221:ENST00000371503:exon4:c.A564C:p.I188I,ENSG00000146221:ENST00000371505:exon5:c.A1473C:p.I491I	NA	NA	6p21.1	NA	NA	NA	NA	rs484757	0.9	0.9	0.893	0.883586	0.9612	1	0.9496	0.6505	0.9519	0.96	1	0.95	0.67	0.9454	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.124307	NA	NA	0.965465	0.713572	NA	0.87	NA	2.7946016
1373	8	27312040	27312040	C	T	intronic	PTK2B	NA	NA	NA	intronic	ENSG00000120899	NA	NA	NA	NA	NA	8p21.2	NA	NA	NA	NA	rs10093964	0.38	0.38	0.372	0.428115	0.3956	0.1964	0.4107	0.6384	0.4284	0.41	0.16	0.38	0.6	0.4022	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.527229	1.527229	NA	0.407791	0.589877	NA	0.551	NA	2.794409
1373	7	142157371	142157371	A	G	intergenic	LOC730441,MTRNR2L6	dist=185303;dist=216760	NA	NA	downstream	ENSG00000227550	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs361398	0.7	0.7	0.685	0.693091	0.7058	0.7966	0.5807	0.7095	0.6309	0.69	0.79	0.59	0.66	NA	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.338652	NA	NA	NA	NA	NA	0.645	NA	2.7942
1373	2	44071639	44071639	C	T	intronic	ABCG8	NA	NA	NA	intronic	ENSG00000143921	NA	NA	NA	NA	NA	2p21	NA	NA	NA	NA	rs4148210	0.51	0.51	0.489	0.515974	0.3718	0.8512	0.3862	0.4175	0.544	0.39	0.86	0.35	0.39	0.4491	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.16532	NA	NA	0.385	0.411257	NA	0.377	NA	2.7941
1373	12	3387555	3387555	C	T	intronic	TSPAN9	NA	NA	NA	intronic	ENSG00000011105	NA	NA	NA	NA	NA	12p13.32	NA	NA	NA	NA	rs651243	0.35	0.35	0.36	0.337061	0.4145	0.1984	0.4121	0.3646	0.3098	0.4	0.21	0.46	0.37	0.3797	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.806265	NA	NA	0.412442	0.396051	NA	0.507	NA	2.793358
1373	15	101569467	101569467	T	C	intronic	LRRK1	NA	NA	NA	intronic	ENSG00000154237	NA	NA	NA	NA	NA	15q26.3	NA	Name=CTCF	NA	NA	rs11639307	0.6	0.6	0.572	0.577077	0.7555	0.5317	0.6499	0.2761	0.7955	0.76	0.57	0.65	0.35	0.7007	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.198198	NA	NA	0.750475	0.344952	NA	0.609	NA	2.793325
1373	22	30384572	30384572	G	A	intronic	MTMR3	NA	NA	NA	intronic	ENSG00000100330	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs5763671	0.44	0.44	0.433	0.404353	0.4175	0.7054	0.3847	0.1838	0.3926	0.42	0.7	0.4	0.21	0.3955	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.824257	1.824257	NA	0.393721	0.212438	NA	0.355	NA	2.793279
1373	4	104063071	104063071	C	T	intronic	CENPE	NA	NA	NA	intronic	ENSG00000138778	NA	NA	NA	NA	NA	4q24	NA	NA	NA	NA	rs2711898	0.43	0.43	0.443	0.449681	0.4076	0.3006	0.353	0.6725	0.4141	0.42	0.27	0.37	0.68	0.4066	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.173753	NA	NA	0.392524	0.581781	ID=COSM149720;OCCURENCE=1(stomach)	0.5	NA	2.793276
1373	1	212615875	212615875	T	C	intronic	NENF	NA	NA	NA	intronic	ENSG00000117691	NA	NA	NA	NA	NA	1q32.3	NA	NA	NA	NA	rs521469	0.49	0.49	0.438	0.473043	0.3807	0.6746	0.562	0.4939	0.2689	0.38	0.66	0.51	0.46	0.427	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.29084	NA	NA	0.399186	0.480027	NA	0.442	NA	2.793114
1373	17	28268800	28268800	A	C	UTR5	EFCAB5	NM_198529:c.-15A>C	NA	NA	UTR5	ENSG00000176927	ENST00000378738:c.-15A>C,ENST00000394832:c.-15A>C,ENST00000320856:c.-15A>C,ENST00000394835:c.-15A>C,ENST00000440741:c.-15A>C	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs4567782	0.55	0.55	0.544	0.546326	0.4712	0.7143	0.572	0.4463	0.5675	0.49	0.72	0.56	0.46	0.5739	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.38663	NA	NA	0.495121	0.427327	NA	0.659	NA	2.7931124
1373	2	160663435	160663435	T	C	intronic	LY75,LY75-CD302	NA	NA	NA	intronic	ENSG00000054219,ENSG00000248672	NA	NA	NA	NA	NA	2q24.2	NA	NA	NA	NA	rs12463589	0.32	0.32	0.291	0.265375	0.4254	0.2937	0.5447	0.0318	0.1892	0.43	0.31	0.51	0.04	0.3717	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.669653	1.669653	NA	0.409884	0.086927	ID=COSN166307;OCCURENCE=1(breast),1(lung)	0.355	NA	2.793016
1373	12	57486647	57486647	A	G	intronic	NAB2	NA	NA	NA	intronic	ENSG00000166886	NA	NA	NA	NA	NA	12q13.3	NA	NA	NA	NA	rs324019	0.58	0.58	0.591	0.567492	0.5964	0.374	0.6167	0.7337	0.4775	0.59	0.38	0.62	0.77	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.716879	NA	NA	0.610937	0.708815	NA	0.507	NA	2.792663
1373	5	156679576	156679576	T	C	intronic	ITK	NA	NA	NA	intronic	ENSG00000113263	NA	NA	NA	NA	NA	5q33.3	NA	NA	NA	NA	rs27341	0.42	0.42	0.413	0.442093	0.3976	0.3085	0.4092	0.6755	0.3333	0.42	0.27	0.39	0.64	0.4149	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.033017	NA	NA	0.395233	0.62778	NA	0.399	NA	2.792267
1373	22	39448750	39448750	T	C	UTR3	APOBEC3F	NM_145298:c.*50T>C	NA	NA	UTR3	ENSG00000128394	ENST00000308521:c.*50T>C	NA	NA	NA	NA	22q13.1	NA	NA	NA	NA	rs5757451	0.52	0.52	0.497	0.514976	0.4901	0.7123	0.6239	0.2572	0.6084	0.47	0.71	0.65	0.27	0.5211	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.292709	NA	NA	0.53	0.300045	NA	0.464	NA	2.7921334
1373	2	170394487	170394487	T	A	intronic	FASTKD1	NA	NA	NA	intronic	ENSG00000138399	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	rs2290005	0.34	0.34	0.296	0.326478	0.4274	0.4593	0.4697	0.0552	0.3507	0.42	0.44	0.4	0.06	0.3802	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.990679	1.990679	NA	0.400349	0.114441	NA	0.268	NA	2.792051
1373	1	1669748	1669748	A	G	intronic	SLC35E2	NA	NA	NA	intronic	ENSG00000215790	NA	NA	NA	NA	NA	1p36.33	NA	NA	NA	NA	rs4648615	0.32	0.32	0.246	0.304712	0.4245	0.3403	0.5159	0.0605	0.3252	0.43	0.31	0.46	0.06	0.3838	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.673805	NA	NA	0.40028	0.099773	NA	0.109	NA	2.79142
1373	22	21340088	21340088	T	C	intronic	LZTR1	NA	NA	NA	intronic	ENSG00000099949	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs178287	0.43	0.43	0.431	0.480032	0.3847	0.4167	0.4769	0.5325	0.5746	0.39	0.37	0.45	0.56	0.4424	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.695197	NA	NA	0.382209	0.508852	NA	0.623	NA	2.790691
1373	1	36565617	36565617	G	A	intronic	COL8A2	NA	NA	NA	intronic	ENSG00000171812	NA	NA	NA	NA	NA	1p34.3	NA	Name=CTCF,ZNF263	NA	NA	rs274754	0.5	0.5	0.471	0.482628	0.7753	0.2609	0.5202	0.3268	0.5941	0.76	0.24	0.56	0.37	0.6492	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.098461	NA	NA	0.785	0.395143	NA	0.616	NA	2.7905
1373	11	117282800	117282800	G	T	exonic	CEP164	NA	synonymous SNV	CEP164:NM_001271933:exon32:c.G4284T:p.S1428S,CEP164:NM_014956:exon33:c.G4299T:p.S1433S	exonic	ENSG00000110274	NA	synonymous SNV	ENSG00000110274:ENST00000278935:exon33:c.G4299T:p.S1433S	NA	NA	11q23.3	NA	NA	NA	NA	rs522885	0.93	0.93	0.942	0.908347	0.9702	0.8284	0.9251	0.9599	0.8456	0.97	0.86	0.93	0.96	0.9383	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.108981	NA	NA	0.967761	0.958428	NA	0.899	NA	2.7904056
1373	10	21104694	21104694	A	T	intronic	NEBL	NA	NA	NA	intronic	ENSG00000078114	NA	NA	NA	NA	NA	10p12.31	NA	NA	NA	NA	rs4748727	0.53	0.53	0.536	0.558906	0.3827	0.6369	0.3602	0.7194	0.5838	0.36	0.66	0.41	0.72	0.4478	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.218846	NA	NA	0.379362	0.661972	NA	0.536	NA	2.790138
1373	22	39448711	39448711	C	A	UTR3	APOBEC3F	NM_145298:c.*11C>A	NA	NA	UTR3	ENSG00000128394	ENST00000308521:c.*11C>A	NA	NA	NA	NA	22q13.1	NA	NA	NA	NA	rs6001402	0.52	0.52	0.487	0.514377	0.4901	0.7103	0.6225	0.2572	0.6084	0.47	0.71	0.64	0.27	0.5236	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.362194	NA	NA	0.529651	0.300045	NA	0.449	NA	2.7899824
1373	2	224743373	224743373	C	T	UTR3	WDFY1	NM_020830:c.*15G>A	NA	NA	UTR3	ENSG00000085449	ENST00000233055:c.*15G>A	NA	NA	NA	NA	2q36.1	NA	NA	NA	NA	rs571111	0.39	0.39	0.389	0.396166	0.5298	0.1915	0.4337	0.3722	0.4755	0.52	0.18	0.47	0.38	0.4772	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.036523	NA	NA	0.53686	0.396732	NA	0.514	NA	2.7894734
1373	17	61562553	61562553	G	A	intronic	ACE	NA	NA	NA	UTR3	ENSG00000159640	ENST00000579726:c.*68G>A	NA	NA	NA	NA	17q23.3	NA	NA	NA	NA	rs4320	0.51	0.51	0.47	0.52516	0.4245	0.6746	0.5634	0.3971	0.6207	0.43	0.68	0.54	0.41	0.4986	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.486398	1.486398	NA	0.454186	0.405129	NA	0.522	NA	2.7893807
1373	5	147505227	147505227	G	A	intronic	SPINK5	NA	NA	NA	intronic	ENSG00000133710	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs2112767	0.51	0.51	0.48	0.509585	0.5924	0.4831	0.6398	0.3903	0.5204	0.56	0.46	0.59	0.43	NA	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.305791	1.305791	NA	0.618479	0.421243	NA	0.478	NA	2.789121
1373	10	37451644	37451644	T	A	intronic	ANKRD30A	NA	NA	NA	intronic	ENSG00000148513	NA	NA	NA	NA	NA	10p11.21	NA	NA	NA	NA	rs1200878	0.28	0.28	0.294	0.338858	0.4384	0.2222	0.3948	0.4629	0.1493	0.34	0.16	0.35	0.28	0.3635	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.125761	NA	NA	0.409091	0.464147	NA	0.145	NA	2.789009
1373	9	38615779	38615779	T	C	intronic	ANKRD18A	NA	NA	NA	intronic	ENSG00000180071	NA	NA	NA	NA	NA	9p13.1	NA	NA	NA	NA	rs1765381	0.38	0.38	0.317	0.360423	0.3996	0.502	0.4568	0.2012	0.3211	0.38	0.49	0.44	0.21	0.4295	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.15101	NA	NA	0.38215	0.223988	NA	0.21	NA	2.78875
1373	17	8473182	8473182	G	A	intronic	MYH10	NA	NA	NA	intronic	ENSG00000133026	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs422173	0.44	0.44	0.423	0.442891	0.3718	0.502	0.4366	0.4327	0.4734	0.39	0.49	0.38	0.5	0.4218	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.688137	NA	NA	0.417713	0.436323	NA	0.42	NA	2.788687
1373	6	10729020	10729020	C	T	intronic	TMEM14C	NA	NA	NA	intronic	ENSG00000111843	NA	NA	NA	NA	NA	6p24.2	NA	NA	NA	NA	rs2153073	0.48	0.48	0.426	0.484625	0.6113	0.5278	0.5274	0.2088	0.6524	0.59	0.51	0.57	0.22	0.6002	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.085338	NA	NA	NA	NA	NA	0.507	NA	2.7885
1373	2	73447775	73447775	A	G	intronic	SMYD5	NA	NA	NA	intronic	ENSG00000135632	NA	NA	NA	NA	NA	2p13.2	NA	NA	NA	NA	rs2303904	0.44	0.44	0.456	0.42492	0.4175	0.3919	0.3761	0.5507	0.3313	0.39	0.42	0.42	0.55	0.3914	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.163955	NA	NA	0.402907	0.515887	ID=COSN166138;OCCURENCE=1(breast)	0.543	NA	2.788193
1373	16	28251007	28251007	G	A	intergenic	XPO6,SBK1	dist=27768;dist=52833	NA	NA	downstream	ENSG00000250982	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs8056552	0.59	0.59	0.536	0.564497	0.7127	0.7133	0.5432	0.239	0.7137	0.71	0.74	0.57	0.25	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.784549	NA	NA	NA	NA	NA	0.601	NA	2.7873
1373	8	133634814	133634814	C	T	intronic	LRRC6	NA	NA	NA	intronic	ENSG00000129295	NA	NA	NA	NA	NA	8q24.22	NA	NA	NA	NA	rs2272681	0.45	0.45	0.496	0.48143	0.3767	0.2827	0.317	0.8828	0.3681	0.39	0.25	0.36	0.85	0.4153	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.037467	NA	NA	0.42093	0.808216	NA	0.587	NA	2.78707
1373	9	132863035	132863035	G	C	intronic	GPR107	NA	NA	NA	intronic	ENSG00000148358	NA	NA	NA	NA	NA	9q34.11	NA	NA	NA	NA	rs2277196	0.63	0.63	0.579	0.640176	0.6103	0.8006	0.6196	0.5295	0.6697	0.62	0.78	0.65	0.48	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.238312	NA	NA	0.602766	0.549133	NA	0.645	NA	2.786934
1373	9	33047398	33047398	T	C	intronic	SMU1	NA	NA	NA	intronic	ENSG00000122692	NA	NA	NA	NA	NA	9p21.1	NA	NA	NA	NA	rs2274767	0.42	0.42	0.419	0.387979	0.4145	0.2867	0.4107	0.5272	0.2607	0.42	0.31	0.42	0.54	0.3848	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.635561	NA	NA	0.413837	0.483659	NA	0.507	NA	2.786863
1373	11	119185347	119185347	G	A	intronic	MCAM	NA	NA	NA	intronic	ENSG00000076706	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs6589732	0.32	0.32	0.298	0.283347	0.4125	0.127	0.4323	0.298	0.1861	0.41	0.16	0.44	0.29	0.372	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.759223	NA	NA	0.428987	0.307412	NA	0.261	NA	2.786513
1373	10	116593175	116593175	C	T	intronic	FAM160B1	NA	NA	NA	UTR3	ENSG00000151553	ENST00000369246:c.*2C>T	NA	NA	NA	NA	10q25.3	NA	NA	NA	NA	rs11196939	0.35	0.35	0.356	0.349441	0.4662	0.2331	0.3487	0.2549	0.4775	0.48	0.26	0.37	0.25	0.4282	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.863872	1.863872	NA	0.48593	0.303223	ID=COSN163769;OCCURENCE=1(NS)	0.471	NA	2.7863367
1373	9	137708960	137708960	A	C	intronic	COL5A1	NA	NA	NA	intronic	ENSG00000130635	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs10776910	0.46	0.46	0.454	0.461661	0.3718	0.4534	0.4265	0.6573	0.3231	0.39	0.42	0.41	0.65	0.4211	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.712153	NA	NA	0.421512	0.623695	NA	0.601	NA	2.785588
1373	2	69201894	69201894	C	T	intronic	GKN1	NA	NA	NA	intronic	ENSG00000169605	NA	NA	NA	NA	NA	2p13.3	NA	NA	NA	NA	rs4417751	0.69	0.69	0.685	0.660543	0.6113	0.7212	0.6441	0.6989	0.6084	0.61	0.8	0.68	0.68	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.873971	NA	NA	0.603394	0.690029	NA	0.58	NA	2.785306
1374	1	111661413	111661413	T	C	intronic	DRAM2	NA	NA	NA	intronic	ENSG00000156171	NA	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	rs325916	0.43	0.43	0.456	0.476438	0.3827	0.2827	0.4193	0.6407	0.591	0.37	0.3	0.43	0.66	0.4532	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.368104	NA	NA	0.379651	0.596093	NA	0.558	NA	2.784449
1374	6	52657552	52657552	C	T	intronic	GSTA1	NA	NA	NA	intronic	ENSG00000243955	NA	NA	NA	NA	NA	6p12.2	NA	NA	NA	NA	rs4715326	0.7	0.7	0.689	0.704872	0.5755	0.8631	0.7089	0.7156	0.6575	0.57	0.86	0.69	0.71	0.6405	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.057421	NA	NA	NA	NA	NA	0.681	NA	2.784
1374	11	4185463	4185463	T	C	intergenic	RRM1,LOC100506082	dist=25357;dist=22919	NA	NA	intergenic	ENSG00000231548,ENSG00000254480	dist=16938;dist=22907	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs979941	0.43	0.43	0.436	0.454273	0.5497	0.3075	0.3804	0.4266	0.5971	0.56	0.3	0.38	0.45	NA	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.656052	NA	NA	NA	NA	NA	0.312	NA	2.7836334
1374	9	137708973	137708973	A	G	intronic	COL5A1	NA	NA	NA	intronic	ENSG00000130635	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs10858283	0.46	0.46	0.444	0.461062	0.3718	0.4534	0.4251	0.6573	0.3211	0.39	0.42	0.41	0.65	0.4247	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.277684	NA	NA	0.42	0.624659	ID=COSN168704;OCCURENCE=1(large_intestine)	0.601	NA	2.7835
1374	1	32134491	32134491	C	G	intronic	COL16A1	NA	NA	NA	intronic	ENSG00000084636	NA	NA	NA	NA	NA	1p35.2	NA	NA	NA	NA	rs2271929	0.5	0.5	0.526	NA	NA	NA	NA	NA	NA	0.62	0.29	0.54	0.53	0.6013	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.169023	NA	NA	0.615309	0.574741	NA	0.587	NA	2.783391
1374	5	476530	476530	C	G	intronic	SLC9A3	NA	NA	NA	ncRNA_exonic	ENSG00000225138	NA	NA	NA	NA	NA	5p15.33	NA	NA	Name=8	NA	rs2244240	0.7	0.7	0.748	0.751198	0.8579	0.5387	0.732	0.8669	0.7178	0.8	0.48	0.73	0.79	0.8226	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.639847	NA	NA	0.870349	0.871539	NA	0.783	NA	2.7824843
1374	14	78365612	78365612	C	T	intronic	ADCK1	NA	NA	NA	intronic	ENSG00000063761	NA	NA	NA	NA	NA	14q24.3	NA	NA	NA	NA	rs2287650	0.37	0.37	0.354	0.372204	0.3777	0.4544	0.5504	0.1785	0.4172	0.38	0.45	0.55	0.15	0.4097	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.280703	NA	NA	0.430233	0.215615	NA	0.348	NA	2.782367
1374	10	21115332	21115332	T	C	intronic	NEBL	NA	NA	NA	intronic	ENSG00000078114	NA	NA	NA	NA	NA	10p12.31	NA	NA	NA	NA	rs1409348	0.53	0.53	0.527	0.558307	0.3867	0.6438	0.366	0.6936	0.6002	0.36	0.66	0.43	0.7	0.4495	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.584347	NA	NA	0.381512	0.62778	ID=COSN163583;OCCURENCE=1(breast)	0.522	NA	2.782288
1374	19	44422982	44422982	G	A	intronic	ZNF45	NA	NA	NA	ncRNA_intronic	ENSG00000267191	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs423320	0.57	0.57	0.552	0.525359	0.5169	0.7996	0.6499	0.3336	0.4223	0.51	0.82	0.58	0.38	0.5283	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.211594	NA	NA	0.50593	0.357921	NA	0.5	NA	2.7822033
1374	2	15644401	15644401	C	T	intronic	NBAS	NA	NA	NA	intronic	ENSG00000151779	NA	NA	NA	NA	NA	2p24.3	NA	NA	NA	NA	rs2287265	0.51	0.51	0.504	0.515974	0.6352	0.2192	0.5663	0.618	0.5256	0.61	0.25	0.59	0.59	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.438557	NA	NA	0.582967	0.570809	NA	0.688	NA	2.781833
1374	4	15937731	15937731	T	C	exonic	FGFBP1	NA	synonymous SNV	FGFBP1:NM_005130:exon3:c.A525G:p.K175K	exonic	ENSG00000137440	NA	synonymous SNV	ENSG00000137440:ENST00000259988:exon2:c.A525G:p.K175K,ENSG00000137440:ENST00000382333:exon3:c.A525G:p.K175K	NA	NA	4p15.32	NA	NA	NA	NA	rs2072313	0.91	0.91	0.913	0.914936	0.9672	0.8204	0.9611	0.8812	0.9714	0.97	0.83	0.96	0.89	0.954	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.142943	NA	NA	0.964186	0.902406	NA	0.949	NA	2.7812806
1374	3	78676422	78676422	G	A	intronic	ROBO1	NA	NA	NA	intronic	ENSG00000169855	NA	NA	NA	NA	NA	3p12.3	NA	NA	NA	NA	rs7614084	0.35	0.35	0.31	0.33726	0.4165	0.2629	0.4496	0.2436	0.3793	0.41	0.26	0.46	0.27	0.3869	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.287004	NA	NA	0.415337	0.25999	NA	0.326	NA	2.781263
1374	7	142149160	142149160	T	G	intergenic	LOC730441,MTRNR2L6	dist=177092;dist=224971	NA	NA	exonic	ENSG00000211725	NA	nonsynonymous SNV	ENSG00000211725:ENST00000390372:exon2:c.A111C:p.Q37H	NA	NA	7q34	NA	NA	NA	NA	rs17217	0.57	0.57	0.538	0.669329	0.7028	0.7986	0.5634	0.6286	0.6319	0.59	0.7	0.45	0.48	0.6419	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.101931	2.101931	0.04	0.708323	0.647528	NA	0.609	NA	2.7803104
1374	19	40046086	40046086	T	C	intergenic	EID2,LGALS13	dist=15248;dist=47083	NA	NA	downstream	ENSG00000269588	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs8108097	0.77	0.77	0.788	0.772764	0.7197	0.8373	0.6354	0.885	0.7065	0.73	0.81	0.69	0.85	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.561313	NA	NA	NA	NA	NA	0.696	NA	2.7803
1374	19	17311442	17311442	C	G	intronic	MYO9B	NA	NA	NA	intronic	ENSG00000099331	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs2305766	0.56	0.56	0.501	0.576078	0.3509	0.746	0.6614	0.584	0.5613	0.36	0.78	0.62	0.57	0.5106	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.117976	NA	NA	0.358993	0.523936	NA	0.63	NA	2.779507
1374	17	61562774	61562774	T	C	intronic	ACE	NA	NA	NA	UTR3	ENSG00000159640	ENST00000582678:c.*1498T>C	NA	NA	NA	NA	17q23.3	NA	NA	NA	NA	rs4321	0.52	0.52	0.456	0.529752	0.4235	0.6756	0.5692	0.4107	0.6217	0.43	0.69	0.56	0.43	0.5098	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.263426	NA	NA	0.453953	0.424648	NA	0.529	NA	2.7794137
1374	20	31383353	31383353	T	G	intronic	DNMT3B	NA	NA	NA	intronic	ENSG00000088305	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs910085	0.56	0.56	0.512	0.584864	0.3529	0.9177	0.598	0.4713	0.6247	0.37	0.91	0.56	0.43	0.4836	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.836588	NA	NA	0.384186	0.439401	NA	0.406	NA	2.779314
1374	19	10568519	10568519	T	G	intronic	PDE4A	NA	NA	NA	intronic	ENSG00000065989	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs4804134	0.49	0.49	0.497	0.523562	0.3837	0.5575	0.317	0.7239	0.5082	0.38	0.54	0.37	0.71	0.4407	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.911139	NA	NA	0.396395	0.682478	NA	0.37	NA	2.779205
1374	11	110103924	110103924	A	C	intronic	RDX	NA	NA	NA	intronic	ENSG00000137710	NA	NA	NA	NA	NA	11q22.3	NA	NA	NA	NA	rs10450619	0.44	0.44	0.406	0.43111	0.3946	0.6389	0.4207	0.3268	0.4029	0.42	0.6	0.41	0.3	0.4177	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.45238	NA	NA	0.408562	0.348478	ID=COSN164048;OCCURENCE=1(breast)	0.348	NA	2.779138
1374	11	92577070	92577070	T	C	intronic	FAT3	NA	NA	NA	intronic	ENSG00000165323	NA	NA	NA	NA	NA	11q14.3	NA	NA	NA	NA	rs4753419	0.4	0.4	0.386	0.386182	0.4105	0.4474	0.4164	0.298	0.3957	0.4	0.47	0.41	0.31	0.4126	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.149895	NA	NA	0.39778	0.31126	NA	0.406	NA	2.77912
1374	8	97321898	97321898	T	A	intronic	PTDSS1	NA	NA	NA	intronic	ENSG00000156471	NA	NA	NA	NA	NA	8q22.1	NA	NA	NA	NA	rs961075	0.4	0.4	0.388	0.410942	0.3956	0.3085	0.3386	0.5726	0.365	0.41	0.31	0.33	0.54	0.4141	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.039082	NA	NA	0.411279	0.558103	NA	0.413	NA	2.779021
1374	9	139982868	139982868	C	T	intronic	MAN1B1	NA	NA	NA	intronic	ENSG00000177239	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs3750518	0.48	0.48	0.456	0.487021	0.3986	0.6538	0.4424	0.4758	0.453	0.4	0.66	0.45	0.42	0.432	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.429274	NA	NA	0.390507	0.453767	NA	0.435	NA	2.778893
1374	1	233490543	233490543	G	A	intronic	KIAA1804	NA	NA	NA	intronic	ENSG00000143674	NA	NA	NA	NA	NA	1q42.2	NA	NA	NA	NA	rs2049182	0.5	0.5	0.343	0.510982	0.4095	0.5595	0.6153	0.5182	0.4816	0.41	0.55	0.58	0.53	0.4392	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.501891	NA	NA	0.372412	0.484793	NA	0.522	NA	2.778888
1374	18	7034448	7034448	G	A	intronic	LAMA1	NA	NA	NA	intronic	ENSG00000101680	NA	NA	NA	NA	NA	18p11.31	NA	NA	NA	NA	rs566825	0.4	0.4	0.41	0.402356	0.4036	0.131	0.3905	0.6944	0.2945	0.41	0.16	0.36	0.7	0.4126	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.66219	NA	NA	0.405	0.635951	NA	0.413	NA	2.7788
1374	8	41519248	41519248	T	C	intronic	ANK1	NA	NA	NA	ncRNA_intronic	ENSG00000253389	NA	NA	NA	NA	NA	8p11.21	NA	NA	NA	NA	rs516946	0.8	0.8	0.792	0.804313	0.7694	0.8552	0.7939	0.7935	0.8098	0.79	0.85	0.75	0.81	0.7853	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.824394	NA	0	NA	NA	NA	0.732	NA	2.7786333
1374	19	15770020	15770020	C	T	intronic	CYP4F3	NA	NA	NA	intronic	ENSG00000186529	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs2460819	0.38	0.38	0.114	0.405152	0.4304	0.3274	0.3444	0.3389	0.592	0.43	0.33	0.36	0.36	0.6523	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.54795	NA	NA	0.138782	0.105765	NA	NA	NA	2.778518
1374	4	39122697	39122697	C	T	UTR3	KLHL5	NM_001007075:c.*11C>T,NM_001171654:c.*11C>T,NM_015990:c.*11C>T,NM_199039:c.*11C>T	NA	NA	ncRNA_UTR3	ENSG00000109790	NA	NA	NA	NA	NA	4p14	NA	NA	NA	NA	rs3733275	0.54	0.54	0.527	0.492612	0.5775	0.495	0.5951	0.3411	0.5348	0.59	0.52	0.62	0.41	0.5587	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.33516	NA	NA	0.585698	0.390831	NA	0.529	NA	2.778102
1374	14	23020638	23020638	T	C	intergenic	OR4E2,DAD1	dist=886400;dist=13169	NA	NA	UTR3	ENSG00000229164	ENST00000478163:c.*90T>C	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs15795	0.29	0.29	0.284	0.298922	0.3688	0.2113	0.2248	0.3548	0.2945	0.36	0.18	0.22	0.39	0.3228	0.39	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.383679	NA	NA	0.363823	0.357579	NA	0.29	NA	2.7779104
1374	5	7927649	7927649	C	T	intergenic	MTRR,LOC729506	dist=26414;dist=405947	NA	NA	intergenic	ENSG00000251168,ENSG00000199773	dist=2138;dist=52610	NA	NA	NA	NA	5p15.31	NA	NA	NA	NA	rs2199339	0.49	0.49	0.454	0.507987	0.5557	0.503	0.4755	0.3638	0.682	0.55	0.48	0.52	0.38	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.680277	NA	NA	NA	NA	NA	0.471	NA	2.7776334
1374	5	7927764	7927764	G	A	intergenic	MTRR,LOC729506	dist=26529;dist=405832	NA	NA	intergenic	ENSG00000251168,ENSG00000199773	dist=2253;dist=52495	NA	NA	NA	NA	5p15.31	NA	NA	NA	NA	rs2199338	0.49	0.49	0.474	0.507788	0.5557	0.503	0.4741	0.3638	0.682	0.55	0.48	0.52	0.38	NA	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.879591	NA	NA	NA	NA	NA	0.471	NA	2.7776334
1374	13	111077197	111077197	G	A	exonic	COL4A2	NA	synonymous SNV	COL4A2:NM_001846:exon5:c.G297A:p.T99T	exonic	ENSG00000134871	NA	synonymous SNV	ENSG00000134871:ENST00000360467:exon5:c.G297A:p.T99T,ENSG00000134871:ENST00000400163:exon5:c.G297A:p.T99T	NA	NA	13q34	NA	NA	NA	NA	rs4238272	0.95	0.95	0.95	0.942692	0.9632	1	0.9683	0.8427	0.9796	0.97	1	0.96	0.84	0.9614	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.045767	NA	NA	0.964561	0.865531	NA	0.906	NA	2.7775056
1374	3	75571172	75571172	T	C	intergenic	FAM86DP,MIR1324	dist=86906;dist=108742	NA	NA	downstream	ENSG00000243794	NA	NA	NA	NA	NA	3p12.3	NA	NA	NA	NA	rs1703190	0.54	0.54	0.543	0.601038	0.7227	0.7034	0.6787	0.4372	0.5368	0.6	0.59	0.6	0.35	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.3773	NA	NA	NA	NA	NA	0.036	NA	2.7773
1374	6	74432923	74432923	C	T	intronic	CD109	NA	NA	NA	intronic	ENSG00000156535	NA	NA	NA	NA	NA	6q13	NA	NA	NA	NA	rs56093139	0.25	0.25	0.201	0.254393	0.4245	0.0992	0.2911	0.121	0.3937	0.43	0.1	0.33	0.1	0.3688	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.53623	NA	NA	0.430051	0.176284	NA	0.217	NA	2.776649
1374	21	22696837	22696837	C	G	intronic	NCAM2	NA	NA	NA	intronic	ENSG00000154654	NA	NA	NA	NA	NA	21q21.1	NA	Name=CTCF_(SC-5916),Rad21,CTCF	NA	NA	rs232467	0.63	0.63	0.612	0.621006	0.7406	0.631	0.6095	0.5023	0.6564	0.74	0.59	0.63	0.52	0.7073	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.796145	NA	NA	0.775624	0.565183	NA	0.688	NA	2.776476
1374	16	8992342	8992342	G	A	intronic	USP7	NA	NA	NA	intronic	ENSG00000187555	NA	NA	NA	NA	NA	16p13.2	NA	NA	NA	NA	rs2304465	0.39	0.39	0.353	0.390176	0.4135	0.2956	0.4193	0.3396	0.5112	0.42	0.3	0.47	0.37	0.3976	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.400586	NA	NA	0.412442	0.314806	NA	0.391	NA	2.776458
1374	17	39261608	39261608	G	A	upstream	KRTAP4-9	NA	NA	NA	UTR5	ENSG00000212722	ENST00000391415:c.-33G>A	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs349791	0.49	0.49	0.34	0.491214	0.669	0.2619	0.5043	0.5015	0.5215	0.64	0.25	0.52	0.52	0.5547	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.157315	NA	NA	NA	NA	NA	0.196	NA	2.7763
1374	20	47739814	47739814	C	T	intronic	STAU1	NA	NA	NA	intronic	ENSG00000124214	NA	NA	NA	NA	NA	20q13.13	NA	NA	NA	NA	rs2295714	0.37	0.37	0.354	0.370407	0.4274	0.3294	0.3761	0.354	0.3722	0.43	0.29	0.4	0.33	0.3948	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.134186	NA	NA	0.401628	0.389469	NA	0.333	NA	2.776172
1374	10	124399985	124399985	G	T	intronic	DMBT1	NA	NA	NA	intronic	ENSG00000187908	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs2261660	0.56	0.56	0.573	0.586062	0.3698	0.6657	0.4582	0.829	0.4888	0.36	0.66	0.46	0.82	0.4735	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.657938	NA	NA	0.380534	0.783393	NA	0.703	NA	2.776166
1374	3	14768554	14768554	G	A	intronic	C3orf20	NA	NA	NA	intronic	ENSG00000131379	NA	NA	NA	NA	NA	3p25.1	NA	NA	NA	NA	rs17255247	0.37	0.37	0.367	0.338059	0.4165	0.3175	0.4424	0.2821	0.2802	0.42	0.31	0.42	0.3	0.3827	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.204578	NA	NA	0.425465	0.33409	NA	0.406	NA	2.775335
1375	1	41466803	41466803	G	A	intronic	CTPS1	NA	NA	NA	intronic	ENSG00000171793	NA	NA	NA	NA	NA	1p34.2	NA	NA	NA	NA	rs12718433	0.36	0.36	0.292	0.333067	0.4066	0.4405	0.5389	0.1014	0.3139	0.4	0.43	0.54	0.1	0.4048	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.925081	NA	NA	0.413837	0.175897	NA	0.312	NA	2.774763
1375	4	109969337	109969337	G	T	intronic	COL25A1	NA	NA	NA	intronic	ENSG00000188517	NA	NA	NA	NA	NA	4q25	NA	NA	NA	NA	rs3108954	0.59	0.59	0.553	0.583466	0.3976	0.6587	0.5821	0.7595	0.4601	0.41	0.69	0.54	0.77	0.4537	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.545395	NA	NA	0.374421	0.674814	NA	0.529	NA	2.774279
1375	5	79024734	79024734	A	G	intronic	CMYA5	NA	NA	NA	intronic	ENSG00000164309	NA	NA	NA	NA	NA	5q14.1	NA	NA	NA	NA	rs1541813	0.55	0.55	0.587	0.549521	0.3817	0.6012	0.3876	0.8139	0.4264	0.38	0.62	0.39	0.83	0.4637	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.777666	NA	NA	0.381029	0.749447	NA	0.594	NA	2.773571
1375	19	15770018	15770018	T	C	intronic	CYP4F3	NA	NA	NA	intronic	ENSG00000186529	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs2460818	0.39	0.39	0.247	0.40615	0.4314	0.3274	0.3444	0.3411	0.593	0.45	0.34	0.37	0.39	0.654	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.337778	NA	NA	0.141094	0.107545	NA	NA	NA	2.773506
1375	19	41748753	41748753	T	C	intronic	AXL	NA	NA	NA	intronic	ENSG00000167601	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs2304234	0.42	0.42	0.422	0.463259	0.4066	0.3591	0.3746	0.674	0.407	0.41	0.33	0.39	0.59	0.4109	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.727507	NA	NA	0.409651	0.602814	NA	0.522	NA	2.772849
1375	6	29897061	29897061	C	T	intergenic	HCG4B,HLA-A	dist=3633;dist=13186	NA	NA	downstream	ENSG00000230795	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs2517751	0.69	0.69	0.727	0.727636	0.7276	0.6319	0.7911	0.7632	0.7331	0.71	0.62	0.72	0.73	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.012146	NA	NA	NA	NA	NA	0.667	NA	2.7724
1375	19	8551094	8551094	T	C	exonic	HNRNPM	NA	synonymous SNV	HNRNPM:NM_005968:exon14:c.T1782C:p.P594P,HNRNPM:NM_031203:exon15:c.T1665C:p.P555P	exonic	ENSG00000099783	NA	synonymous SNV	ENSG00000099783:ENST00000325495:exon14:c.T1782C:p.P594P,ENSG00000099783:ENST00000348943:exon15:c.T1665C:p.P555P	NA	NA	19p13.2	NA	NA	NA	NA	rs2230647	0.89	0.89	0.852	0.867612	0.9761	0.9812	0.9424	0.5756	0.9806	0.98	0.99	0.96	0.57	0.945	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.632793	NA	NA	0.973641	0.623066	NA	0.754	NA	2.7719256
1375	17	1756351	1756351	A	G	intronic	RPA1	NA	NA	NA	intronic	ENSG00000132383	NA	NA	NA	NA	NA	17p13.3	NA	NA	NA	NA	rs2287321	0.45	0.45	0.415	0.45028	0.4056	0.5278	0.513	0.3903	0.453	0.4	0.55	0.49	0.39	0.4367	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.069736	NA	NA	0.387209	0.393327	NA	0.486	NA	2.770491
1375	22	51117137	51117137	G	A	intronic	SHANK3	NA	NA	NA	intronic	ENSG00000251322	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs9616914	0.27	0.27	0.282	0.250998	0.4314	0.0595	0.2507	0.2262	0.2965	0.44	0.08	0.3	0.2	0.3574	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.905687	NA	NA	0.441094	0.235145	NA	0.217	NA	2.770106
1375	22	50487567	50487567	T	C	intergenic	IL17REL,MLC1	dist=36512;dist=10253	NA	NA	intronic	ENSG00000138892	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs137911	0.86	0.86	0.857	0.860423	0.8966	0.9187	0.7565	0.7723	0.956	0.9	0.92	0.78	0.78	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.133126	NA	NA	NA	NA	NA	0.79	NA	2.7700667
1375	2	128396807	128396807	A	G	UTR3	LIMS2	NM_017980:c.*49T>C,NM_001136037:c.*49T>C,NM_001256542:c.*49T>C,NM_001161404:c.*49T>C,NM_001161403:c.*49T>C	NA	NA	UTR3	ENSG00000072163	ENST00000426981:c.*49T>C,ENST00000324938:c.*49T>C,ENST00000409754:c.*49T>C,ENST00000409286:c.*49T>C,ENST00000410011:c.*49T>C,ENST00000409808:c.*49T>C,ENST00000355119:c.*49T>C,ENST00000409455:c.*49T>C,ENST00000410038:c.*49T>C,ENST00000545738:c.*49T>C,ENST00000413578:c.*285T>C,ENST00000409254:c.*49T>C	NA	NA	NA	NA	2q14.3	NA	NA	NA	NA	rs891515	0.52	0.52	0.549	0.584665	0.5268	0.254	0.4438	0.8563	0.7178	0.53	0.29	0.43	0.84	0.5354	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.577367	NA	NA	0.501163	0.793236	NA	0.674	NA	2.7699704
1375	20	47892270	47892270	T	C	intronic	ZNFX1	NA	NA	NA	intronic	ENSG00000124201	NA	NA	NA	NA	NA	20q13.13	NA	NA	Name=30	NA	rs238191	0.64	0.64	0.644	0.601238	0.7634	0.5278	0.6412	0.5106	0.6043	0.75	0.52	0.67	0.6	0.6969	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.618052	NA	NA	0.769767	0.537676	NA	0.616	NA	2.769933
1375	19	36045772	36045772	A	G	intronic	ATP4A	NA	NA	NA	intronic	ENSG00000105675	NA	NA	NA	NA	NA	19q13.12	NA	NA	NA	NA	rs2733739	0.61	0.61	0.563	0.591254	0.6153	0.6855	0.6729	0.4024	0.6667	0.62	0.72	0.67	0.44	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.012465	NA	NA	0.615018	0.467466	NA	0.507	NA	2.769682
1375	1	36602943	36602943	C	T	intronic	TRAPPC3	NA	NA	NA	intronic	ENSG00000054116	NA	NA	NA	NA	NA	1p34.3	NA	NA	Name=3	NA	rs2231318	0.77	0.77	0.783	0.750399	0.7406	0.7063	0.8098	0.8533	0.6247	0.73	0.73	0.83	0.86	0.7423	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.439126	NA	NA	0.747558	0.818656	NA	0.841	NA	2.769542
1375	5	150917545	150917545	G	A	intronic	FAT2	NA	NA	NA	intronic	ENSG00000086570	NA	NA	NA	NA	NA	5q33.1	NA	NA	NA	NA	rs3816007	0.39	0.39	0.382	0.386581	0.4344	0.2817	0.3357	0.4939	0.3364	0.43	0.27	0.38	0.5	0.3907	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.703772	NA	NA	0.405465	0.470949	NA	0.435	NA	2.769435
1375	1	19858807	19858807	T	C	intergenic	CAPZB,MINOS1	dist=46741;dist=64664	NA	NA	upstream	ENSG00000239027	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs4350219	0.68	0.68	0.669	0.702276	0.7306	0.4563	0.745	0.8253	0.7301	0.74	0.44	0.73	0.84	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.02723	NA	NA	NA	NA	NA	0.746	NA	2.7694
1375	19	1043864	1043864	G	C	intronic	ABCA7	NA	NA	NA	intronic	ENSG00000064687	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs4622634	0.38	0.38	0.307	0.358626	0.3797	0.4246	0.6081	0.1573	0.364	0.37	0.46	0.57	0.14	0.4302	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.836468	NA	NA	0.420814	0.211076	NA	0.413	NA	2.769286
1375	3	169550759	169550759	G	A	intronic	LRRIQ4	NA	NA	NA	intronic	ENSG00000188306	NA	NA	NA	NA	NA	3q26.2	NA	NA	NA	NA	rs12486767	0.54	0.54	0.514	0.557508	0.3897	0.752	0.6037	0.5492	0.5082	0.39	0.76	0.54	0.51	0.4734	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.631164	NA	NA	0.368183	0.49782	NA	0.442	NA	2.768717
1375	22	44559842	44559842	A	G	intronic	PARVB	NA	NA	NA	intronic	ENSG00000188677	NA	NA	NA	NA	NA	22q13.31	NA	NA	NA	NA	rs139081	0.41	0.41	0.405	0.461062	0.4135	0.3264	0.4424	0.5424	0.5521	0.41	0.29	0.42	0.55	0.4194	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.149059	NA	NA	0.398488	0.512256	NA	0.312	NA	2.768612
1375	6	70963156	70963156	T	G	intronic	COL9A1	NA	NA	NA	intronic	ENSG00000112280	NA	NA	NA	NA	NA	6q13	NA	NA	NA	NA	rs701690	0.38	0.38	0.406	0.369209	0.4284	0.2927	0.2752	0.5113	0.2618	0.42	0.27	0.32	0.52	0.3882	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.684389	NA	NA	0.415116	0.479346	NA	0.507	NA	2.768284
1375	22	50485793	50485793	T	C	intergenic	IL17REL,MLC1	dist=34738;dist=12027	NA	NA	intronic	ENSG00000138892	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs137906	0.85	0.85	0.852	0.86242	0.8986	0.9187	0.7594	0.7769	0.956	0.9	0.92	0.78	0.76	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.352883	NA	NA	NA	NA	NA	0.841	NA	2.7680667
1375	15	25330550	25330550	T	A	ncRNA_exonic	SNORD116-18	NA	NA	NA	ncRNA_exonic	ENSG00000206688	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs3803328	0.66	0.66	0.667	0.637979	0.6312	0.5536	0.6657	0.8359	0.4448	0.63	0.55	0.69	0.8	0.6257	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.077884	NA	NA	0.641888	0.812785	NA	0.674	NA	2.7678786
1375	18	7024345	7024345	C	T	intronic	LAMA1	NA	NA	NA	intronic	ENSG00000101680	NA	NA	NA	NA	NA	18p11.31	NA	NA	NA	NA	rs548577	0.44	0.44	0.445	0.44988	0.4076	0.1448	0.4035	0.8646	0.2802	0.42	0.18	0.37	0.85	0.4222	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.93339	NA	NA	0.402326	0.765093	NA	0.428	NA	2.767874
1375	5	177669413	177669413	T	G	intronic	COL23A1	NA	NA	NA	intronic	ENSG00000050767	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs2241579	0.49	0.49	0.51	0.489816	0.4066	0.621	0.3588	0.5703	0.4243	0.4	0.62	0.33	0.6	0.4283	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.044303	NA	NA	0.397847	0.52248	NA	0.428	NA	2.767253
1375	3	169566090	169566090	A	G	intronic	LRRC31	NA	NA	NA	intronic	ENSG00000114248	NA	NA	NA	NA	NA	3q26.2	NA	NA	NA	NA	rs9290375	0.54	0.54	0.516	0.558906	0.3897	0.754	0.6037	0.5514	0.5102	0.39	0.76	0.54	0.52	0.4734	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.888228	NA	NA	0.369823	0.504455	NA	0.449	NA	2.767077
1375	22	44323074	44323074	G	A	intronic	PNPLA3	NA	NA	NA	intronic	ENSG00000100344	NA	NA	NA	NA	NA	22q13.31	NA	NA	NA	NA	rs139047	0.34	0.34	0.347	0.317292	0.4245	0.4147	0.2507	0.1778	0.3425	0.43	0.39	0.25	0.21	0.3862	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.502608	NA	NA	0.422326	0.228325	NA	0.254	NA	2.766974
1375	22	23010943	23010943	G	A	intergenic	GGTLC2,MIR650	dist=20575;dist=154327	NA	NA	intronic	ENSG00000211658	NA	NA	NA	NA	NA	22q11.22	NA	NA	NA	NA	rs406876	0.43	0.43	0.363	0.394569	0.4513	0.496	0.6441	0.174	0.3528	0.44	0.52	0.6	0.2	0.4484	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.108986	NA	NA	NA	NA	NA	0.348	NA	2.7669667
1375	18	5960165	5960165	G	A	intronic	L3MBTL4	NA	NA	NA	ncRNA_intronic	ENSG00000265487	NA	NA	NA	NA	NA	18p11.31	NA	NA	NA	NA	rs505559	0.73	0.73	0.755	0.76278	0.5	0.9266	0.5778	0.9629	0.7249	0.51	0.95	0.56	0.94	0.5825	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.229765	NA	NA	0.483895	0.893716	NA	0.529	NA	2.7669383
1375	20	47845220	47845220	T	A	intronic	DDX27	NA	NA	NA	intronic	ENSG00000124228	NA	NA	NA	NA	NA	20q13.13	NA	NA	Name=7	NA	rs238165	0.65	0.65	0.642	0.605032	0.7644	0.5268	0.6441	0.5234	0.6043	0.75	0.52	0.67	0.6	0.6995	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.159126	NA	NA	0.769767	0.55084	NA	0.623	NA	2.766333
1376	20	49191228	49191228	A	C	intronic	PTPN1	NA	NA	NA	ncRNA_exonic	ENSG00000232043	NA	NA	NA	NA	NA	20q13.13	NA	NA	NA	NA	rs1885177	0.5	0.5	0.488	0.511781	0.5149	0.6438	0.5173	0.326	0.6196	0.51	0.67	0.48	0.31	0.528	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.097133	NA	NA	0.525581	0.33704	NA	0.558	NA	2.7648523
1376	12	124104460	124104460	C	G	intronic	DDX55	NA	NA	NA	intronic	ENSG00000111364	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs7302183	0.38	0.38	0.38	0.426118	0.4026	0.1339	0.3314	0.7148	0.4284	0.4	0.11	0.35	0.68	0.4037	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.315035	NA	NA	0.428937	0.666213	NA	0.384	NA	2.764763
1376	12	131876810	131876810	A	G	intergenic	LOC116437,SFSWAP	dist=179334;dist=318822	NA	NA	intergenic	ENSG00000256484,ENSG00000256209	dist=21206;dist=77046	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs61935878	0.54	0.54	0.515	0.522764	0.5686	0.3294	0.5576	0.7133	0.3926	0.57	0.35	0.58	0.67	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.772239	NA	NA	NA	NA	NA	0.174	NA	2.7647334
1376	20	2845130	2845130	G	A	intronic	PTPRA,VPS16	NA	NA	NA	intronic	ENSG00000132670,ENSG00000215305	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs730819	0.44	0.44	0.403	0.438698	0.4175	0.6627	0.3501	0.2239	0.5828	0.43	0.65	0.41	0.24	0.4271	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.197589	NA	NA	0.39093	0.248071	NA	0.486	NA	2.76447
1376	11	800486	800486	C	T	intronic	PIDD	NA	NA	NA	intronic	ENSG00000177595	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs7117921	0.37	0.37	0.075	0.369209	0.5388	0.2887	0.647	0.2564	0.2331	0.45	0.3	0.56	0.19	0.4849	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.946549	NA	NA	0.212707	0.056617	NA	NA	NA	2.763593
1376	11	116631690	116631690	G	A	intronic	BUD13	NA	NA	NA	intronic	ENSG00000137656	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs3741300	0.33	0.33	0.321	0.277955	0.4254	0.379	0.2435	0.1248	0.2536	0.45	0.34	0.28	0.14	0.3626	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.336612	1.336612	NA	0.448557	0.19264	ID=COSN164054;OCCURENCE=1(breast)	0.399	NA	2.763443
1376	19	10108714	10108714	G	A	intronic	COL5A3	NA	NA	NA	intronic	ENSG00000080573	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs7254800	0.38	0.38	0.365	0.355831	0.4215	0.3185	0.4049	0.4002	0.2321	0.41	0.32	0.4	0.37	0.3895	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.731017	NA	NA	0.425814	0.412619	NA	0.37	NA	2.763186
1376	2	38537626	38537626	A	C	intronic	ATL2	NA	NA	NA	intronic	ENSG00000119787	NA	NA	NA	NA	NA	2p22.2	NA	NA	NA	NA	rs2305245	0.44	0.44	0.451	0.490615	0.4076	0.1925	0.3919	0.8238	0.5031	0.41	0.19	0.4	0.82	0.4329	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.917493	NA	NA	0.396395	0.735361	ID=COSN166071;OCCURENCE=1(breast)	0.442	NA	2.763105
1376	17	40849842	40849842	A	G	intronic	CNTNAP1	NA	NA	NA	ncRNA_intronic	ENSG00000267765	NA	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs1553468	0.56	0.56	0.571	0.614417	0.506	0.503	0.4438	0.8737	0.6115	0.5	0.48	0.44	0.85	0.5459	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.913781	NA	NA	0.518372	0.823877	NA	0.63	NA	2.7630613
1376	4	77065518	77065518	T	C	intronic	NUP54	NA	NA	NA	intronic	ENSG00000138750	NA	NA	NA	NA	NA	4q21.1	NA	NA	NA	NA	rs11946345	0.58	0.58	0.568	0.575479	0.3658	0.8958	0.5072	0.5764	0.5082	0.37	0.89	0.49	0.59	0.4812	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.733097	1.733097	NA	0.390233	0.539038	NA	0.428	NA	2.762767
1376	1	16359051	16359051	C	A	intronic	CLCNKA	NA	NA	NA	intronic	ENSG00000186510	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs10927892	0.57	0.57	0.104	0.648163	0.5577	0.7659	0.4467	0.7489	0.6268	0.49	0.69	0.44	0.68	0.561	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.333482	NA	NA	0.118605	0.193827	NA	NA	NA	2.762695
1376	12	78570914	78570914	G	C	intronic	NAV3	NA	NA	NA	intronic	ENSG00000067798	NA	NA	NA	NA	NA	12q21.2	NA	NA	NA	NA	rs1020462	0.47	0.47	0.466	0.496406	0.3857	0.5526	0.5749	0.4274	0.59	0.37	0.55	0.57	0.43	0.4618	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.319017	NA	NA	0.389888	0.391595	NA	0.486	NA	2.762612
1376	3	98491619	98491619	G	T	intronic	ST3GAL6	NA	NA	NA	intronic	ENSG00000064225	NA	NA	NA	NA	NA	3q12.1	NA	NA	NA	NA	rs2334230	0.32	0.32	0.311	0.332468	0.4046	0.1974	0.3415	0.3812	0.3252	0.42	0.15	0.33	0.34	0.3983	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.902261	NA	NA	0.434767	0.40286	NA	0.355	NA	2.762333
1376	11	72412675	72412675	A	G	intronic	ARAP1	NA	NA	NA	ncRNA_intronic	ENSG00000245148	NA	NA	NA	NA	NA	11q13.4	NA	NA	NA	NA	rs11235574	0.47	0.47	0.442	0.461661	0.5169	0.376	0.4726	0.4584	0.4898	0.51	0.36	0.52	0.48	0.5098	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.62209	NA	NA	0.545539	0.471591	NA	0.514	NA	2.7610943
1376	22	23029374	23029374	G	A	intergenic	GGTLC2,MIR650	dist=39006;dist=135896	NA	NA	intronic	ENSG00000211659	NA	NA	NA	NA	NA	22q11.22	NA	NA	NA	NA	rs451369	0.91	0.91	0.9	0.926917	0.9056	0.9276	0.9481	0.9002	0.9693	0.9	0.92	0.93	0.89	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.27664	NA	NA	NA	NA	NA	0.783	NA	2.7610667
1376	20	2621998	2621998	T	C	UTR3	TMC2	NM_080751:c.*1T>C	NA	NA	UTR3	ENSG00000149488	ENST00000358864:c.*1T>C	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs6050798	0.52	0.52	0.493	0.531949	0.5109	0.5585	0.5346	0.5318	0.5245	0.49	0.56	0.53	0.51	0.5474	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.513032	NA	NA	0.514186	0.52542	NA	0.428	NA	2.7608474
1376	1	246929483	246929483	A	G	intronic	SCCPDH	NA	NA	NA	intronic	ENSG00000143653	NA	NA	NA	NA	NA	1q44	NA	NA	NA	NA	rs12144408	0.3	0.3	0.291	0.297724	0.4225	0.2302	0.3401	0.1067	0.4673	0.42	0.25	0.36	0.15	0.3845	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.94362	NA	NA	0.432326	0.155924	ID=COSN163505;OCCURENCE=1(NS)	0.42	NA	2.760674
1376	20	13464030	13464030	C	A	intronic	TASP1	NA	NA	NA	intronic	ENSG00000089123	NA	NA	NA	NA	NA	20p12.1	NA	NA	NA	NA	rs2273480	0.34	0.34	0.328	0.309105	0.4215	0.37	0.3631	0.1657	0.2863	0.43	0.37	0.31	0.18	0.3901	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.129675	NA	NA	0.427907	0.211984	NA	0.268	NA	2.760493
1376	21	43255509	43255509	C	T	intronic	PRDM15	NA	NA	NA	intronic	ENSG00000141956	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs2839392	0.46	0.46	0.455	0.443291	0.3976	0.5585	0.3228	0.5363	0.3313	0.4	0.56	0.33	0.55	0.4201	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.595724	NA	NA	0.42186	0.520427	ID=COSN166660;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.486	NA	2.76044
1376	20	238540	238540	C	T	intronic	DEFB132	NA	NA	NA	intronic	ENSG00000186458	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs416360	0.63	0.63	0.617	0.628594	0.6431	0.6687	0.5533	0.6157	0.6431	0.64	0.65	0.57	0.62	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.228031	NA	NA	0.59648	0.660405	NA	0.696	NA	2.76042
1376	7	137801413	137801413	A	C	UTR3	AKR1D1	NM_001190907:c.*30A>C,NM_001190906:c.*5A>C,NM_005989:c.*5A>C	NA	NA	UTR3	ENSG00000122787	ENST00000432161:c.*30A>C,ENST00000411726:c.*5A>C,ENST00000242375:c.*5A>C	NA	NA	NA	NA	7q33	NA	NA	NA	NA	rs1872929	0.77	0.77	0.767	NA	NA	NA	NA	NA	NA	0.78	0.71	0.68	0.9	0.781	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.344279	NA	NA	0.793605	0.878575	NA	0.862	NA	2.7587284
1376	1	233489529	233489529	G	A	intronic	KIAA1804	NA	NA	NA	intronic	ENSG00000143674	NA	NA	NA	NA	NA	1q42.2	NA	NA	NA	NA	rs7549137	0.5	0.5	0.499	0.510383	0.4095	0.5595	0.6153	0.5159	0.4816	0.41	0.55	0.58	0.53	0.4496	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.004673	NA	NA	0.382442	0.491829	ID=COSN163477;OCCURENCE=1(NS)	0.529	NA	2.758458
1376	8	143957405	143957405	A	C	intronic	CYP11B1	NA	NA	NA	intronic	ENSG00000104499,ENSG00000160882	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs6471570	0.66	0.66	0.655	0.684704	0.5934	0.8512	0.6556	0.6203	0.7147	0.58	0.84	0.6	0.62	0.6483	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.097509	NA	NA	NA	NA	NA	0.725	NA	2.7583
1376	4	77065264	77065264	C	T	intronic	NUP54	NA	NA	NA	intronic	ENSG00000138750	NA	NA	NA	NA	NA	4q21.1	NA	NA	NA	NA	rs11736522	0.59	0.59	0.585	0.58726	0.3658	0.8958	0.5115	0.6188	0.5082	0.37	0.89	0.5	0.62	0.4856	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.212014	NA	NA	0.390349	0.578529	NA	0.457	NA	2.758251
1376	5	79354647	79354647	C	G	intronic	THBS4	NA	NA	NA	ncRNA_intronic	ENSG00000249825	NA	NA	NA	NA	NA	5q14.1	NA	NA	NA	NA	rs432267	0.56	0.56	0.543	0.571685	0.5527	0.5198	0.5476	0.6536	0.5511	0.54	0.51	0.56	0.64	0.5251	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.061761	NA	NA	0.497674	0.631639	NA	0.522	NA	2.7578593
1376	12	4853915	4853915	T	G	intronic	GALNT8	NA	NA	NA	intronic	ENSG00000130035	NA	NA	NA	NA	NA	12p13.32	NA	NA	NA	NA	rs12312983	0.41	0.41	0.381	0.325879	0.4235	0.3621	0.4222	0.233	0.2454	0.43	0.49	0.44	0.24	0.3862	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.51703	NA	NA	0.432558	0.288697	NA	0.362	NA	2.757742
1376	7	143036318	143036318	G	A	intronic	CLCN1	NA	NA	NA	intronic	ENSG00000188037	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs2272253	0.41	0.41	0.439	0.414537	0.4056	0.2768	0.3112	0.5877	0.4049	0.4	0.26	0.36	0.64	0.4108	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.179477	NA	NA	0.426047	0.562642	NA	0.5	NA	2.757553
1376	7	143036337	143036337	C	T	intronic	CLCN1	NA	NA	NA	intronic	ENSG00000188037	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs2272252	0.41	0.41	0.424	0.414337	0.4056	0.2768	0.3098	0.5877	0.4049	0.4	0.26	0.36	0.64	0.4108	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.421097	NA	NA	0.426163	0.562642	NA	0.5	NA	2.757437
1376	6	70386320	70386320	C	T	intronic	LMBRD1	NA	NA	NA	intronic	ENSG00000168216	NA	NA	NA	NA	NA	6q13	NA	NA	NA	NA	rs3214021	0.41	0.41	0.403	0.409145	0.4354	0.5645	0.4424	0.2042	0.4755	0.43	0.56	0.41	0.2	0.4049	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.686033	NA	NA	0.402558	0.23695	NA	0.297	NA	2.757142
1376	19	21045864	21045864	C	A	intergenic	ZNF626,ZNF85	dist=201462;dist=60195	NA	NA	intergenic	ENSG00000269373,ENSG00000105750	dist=15641;dist=60164	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs7254763	0.53	0.53	0.49	0.507188	0.5765	0.5437	0.5346	0.3517	0.589	0.61	0.56	0.54	0.38	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.520619	NA	NA	NA	NA	NA	0.435	NA	2.7568334
1376	9	37020622	37020622	A	C	intronic	PAX5	NA	NA	NA	intronic	ENSG00000196092	NA	NA	NA	NA	NA	9p13.2	NA	NA	NA	NA	rs2297105	0.49	0.49	0.478	0.551717	0.3787	0.5337	0.5173	0.6407	0.6524	0.41	0.51	0.51	0.58	0.4708	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.874228	2.874228	NA	0.393953	0.616659	NA	0.42	NA	2.756547
1376	14	51491956	51491956	T	C	intronic	TRIM9	NA	NA	NA	intronic	ENSG00000100505	NA	NA	NA	NA	NA	14q22.1	NA	NA	NA	NA	rs11848681	0.43	0.43	0.397	0.453275	0.3926	0.5962	0.3631	0.2708	0.6789	0.41	0.6	0.36	0.32	0.4302	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.167567	NA	NA	0.420814	0.287562	NA	0.406	NA	2.756386
1376	15	41819283	41819283	G	A	intronic	RPAP1	NA	NA	NA	intronic	ENSG00000103932	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs2297379	0.33	0.33	0.306	0.324681	0.4344	0.2004	0.4986	0.2042	0.3793	0.44	0.19	0.48	0.22	0.3932	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.66037	NA	NA	0.416163	0.225828	NA	0.29	NA	2.756237
1376	6	38820451	38820451	G	A	intronic	DNAH8	NA	NA	NA	intronic	ENSG00000124721	NA	NA	NA	NA	NA	6p21.2	NA	NA	NA	NA	rs9369085	0.46	0.46	0.423	0.451677	0.3757	0.6954	0.5865	0.2398	0.4693	0.37	0.67	0.55	0.26	0.4428	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.754969	2.754969	NA	0.425814	0.261462	NA	0.543	NA	2.755686
1377	21	37650235	37650235	T	C	intronic	DOPEY2	NA	NA	NA	intronic	ENSG00000142197	NA	NA	NA	NA	NA	21q22.12	NA	NA	NA	NA	rs2070517	0.39	0.39	0.354	0.390176	0.4095	0.3919	0.3761	0.4213	0.3364	0.41	0.36	0.36	0.39	0.4058	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.723054	NA	NA	0.429767	0.40581	NA	0.268	NA	2.754933
1377	6	129927014	129927014	A	G	intronic	ARHGAP18	NA	NA	NA	intronic	ENSG00000146376	NA	NA	NA	NA	NA	6q22.33	NA	NA	NA	NA	rs3813366	0.5	0.5	0.492	0.503994	0.4115	0.4514	0.5014	0.7118	0.3742	0.41	0.46	0.48	0.72	0.4315	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.299512	NA	NA	0.402209	0.682025	NA	0.543	NA	2.754791
1377	14	21821821	21821821	A	C	intronic	SUPT16H	NA	NA	NA	intronic	ENSG00000092201	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs3736824	0.34	0.34	0.311	0.351637	0.4115	0.4871	0.2925	0.0741	0.5675	0.4	0.48	0.33	0.09	0.4038	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.597895	NA	NA	0.430116	0.128461	NA	0.29	NA	2.754584
1377	1	89479758	89479758	T	C	intronic	GBP3	NA	NA	NA	intronic	ENSG00000117226	NA	NA	NA	NA	NA	1p22.2	NA	NA	NA	NA	rs3795543	0.63	0.63	0.614	0.643371	0.7614	0.5188	0.5692	0.6165	0.7393	0.76	0.49	0.65	0.55	0.7133	0.77	.	.	.	.	.	.	.	.	1.000	P	.	.	.	.	.	.	.	.	.	0.045	4.25	-1.33	-0.713	-0.319	8.814	0.045365	NA	NA	0.771744	0.667726	NA	0.645	NA	2.753556
1377	22	22922878	22922878	T	C	intergenic	LOC648691,POM121L1P	dist=13871;dist=51150	NA	NA	downstream	ENSG00000253120	NA	NA	NA	NA	NA	22q11.22	NA	NA	NA	NA	rs459939	0.78	0.78	0.769	0.777356	0.7465	0.7907	0.8415	0.7587	0.7751	0.75	0.8	0.81	0.8	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.316773	NA	NA	NA	NA	NA	0.725	NA	2.7535
1377	19	7712585	7712585	T	G	intronic	STXBP2	NA	NA	NA	intronic	ENSG00000076944	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs794073	0.74	0.74	0.724	NA	NA	NA	NA	NA	NA	0.67	0.84	0.65	0.78	0.6343	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.312001	NA	NA	0.612558	0.771448	NA	0.783	NA	2.753142
1377	3	41291081	41291081	G	A	intronic	ULK4	NA	NA	NA	intronic	ENSG00000168038	NA	NA	NA	NA	NA	3p22.1	NA	NA	NA	NA	rs2293304	0.29	0.29	0.282	0.277356	0.4085	0.2569	0.3055	0.0908	0.3957	0.43	0.24	0.33	0.11	0.398	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.634557	NA	NA	0.440897	0.142411	NA	0.362	NA	2.752603
1377	14	107083633	107083633	T	C	intergenic	LINC00221,NONE	dist=132104;dist=NONE	NA	NA	intronic	ENSG00000224373	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs2516932	NA	NA	0.372	0.460863	0.3111	0.3879	0.3545	0.5681	0.6207	NA	NA	NA	NA	0.3399	0.4	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.138845	NA	NA	0.263464	0.40021	NA	0.014	NA	2.7522027
1377	8	30469805	30469805	A	C	intronic	GTF2E2	NA	NA	NA	intronic	ENSG00000197265	NA	NA	NA	NA	NA	8p12	NA	NA	NA	NA	rs7815625	0.3	0.3	0.299	0.333666	0.4165	0.2788	0.2781	0.1528	0.589	0.44	0.25	0.25	0.17	0.4031	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.595071	NA	NA	0.428721	0.197231	NA	0.275	NA	2.751679
1377	7	2613042	2613042	G	C	intronic	IQCE	NA	NA	NA	intronic	ENSG00000106012	NA	NA	NA	NA	NA	7p22.3	NA	NA	Name=4	NA	rs2304540	0.68	0.68	0.66	0.693291	0.7575	0.4891	0.7003	0.7753	0.7219	0.77	0.51	0.69	0.76	0.7379	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.17014	NA	NA	0.753186	0.778478	NA	0.688	NA	2.751414
1377	11	800485	800485	T	A	intronic	PIDD	NA	NA	NA	intronic	ENSG00000177595	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs7121646	0.37	0.37	0.08	0.369209	0.5388	0.2887	0.647	0.2564	0.2331	0.45	0.31	0.56	0.19	0.4875	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.455961	NA	NA	0.222364	0.061619	NA	NA	NA	2.751336
1377	4	187129995	187129995	A	G	intronic	CYP4V2	NA	NA	NA	intronic	ENSG00000145476	NA	NA	NA	NA	NA	4q35.2	NA	NA	NA	NA	rs2276917	0.35	0.35	0.324	0.369409	0.4404	0.253	0.3732	0.2564	0.5665	0.44	0.27	0.43	0.24	0.4008	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.218316	NA	NA	0.407907	0.284158	NA	0.341	NA	2.750893
1377	20	17474690	17474690	T	G	UTR3	BFSP1	NM_001195:c.*29A>C,NM_001161705:c.*29A>C	NA	NA	UTR3	ENSG00000125864	ENST00000377868:c.*29A>C,ENST00000377873:c.*29A>C,ENST00000544874:c.*29A>C,ENST00000536626:c.*29A>C	NA	NA	NA	NA	20p12.1	NA	NA	NA	NA	rs6105762	0.49	0.49	0.503	0.506989	0.5358	0.4732	0.5231	0.4297	0.6053	0.52	0.47	0.54	0.44	0.5257	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.517356	NA	NA	0.521056	0.44505	NA	0.572	NA	2.7507774
1377	1	19518659	19518659	G	A	intronic	UBR4	NA	NA	NA	intronic	ENSG00000127481	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs11588032	0.51	0.51	0.469	0.487819	0.4105	0.6885	0.4942	0.447	0.411	0.4	0.72	0.45	0.48	0.4434	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.188112	NA	NA	0.395392	0.437301	NA	0.5	NA	2.750708
1377	2	119739269	119739269	C	T	intronic	MARCO	NA	NA	NA	intronic	ENSG00000019169	NA	NA	NA	NA	NA	2q14.2	NA	NA	NA	NA	rs56216274	0.28	0.28	0.285	0.239816	0.4612	0.1677	0.2939	0.1029	0.2331	0.45	0.16	0.34	0.13	0.3514	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.335555	1.335555	NA	0.436729	0.162875	NA	0.326	NA	2.750671
1377	5	151239306	151239306	T	C	intronic	GLRA1	NA	NA	NA	intronic	ENSG00000145888	NA	NA	NA	NA	NA	5q33.1	NA	NA	NA	NA	rs6870491	0.4	0.4	0.394	0.450679	0.4205	0.3304	0.4035	0.5703	0.4775	0.42	0.3	0.37	0.51	0.4137	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.562422	NA	NA	0.415349	0.535179	NA	0.428	NA	2.750451
1377	17	8050737	8050737	G	C	intronic	PER1	NA	NA	NA	intronic	ENSG00000179094	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs885747	0.35	0.35	0.349	0.345847	0.4414	0.1171	0.2911	0.5552	0.2393	0.45	0.11	0.34	0.5	0.3799	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.112683	NA	NA	0.42907	0.550182	NA	0.464	NA	2.74963
1377	19	33635887	33635887	T	G	intronic	WDR88	NA	NA	NA	intronic	ENSG00000166359	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs3848599	0.6	0.6	0.614	0.686302	0.3688	0.5933	0.683	0.975	0.7209	0.37	0.59	0.61	0.97	0.5076	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.287259	NA	NA	0.374186	0.874716	NA	0.616	NA	2.749414
1377	2	25463483	25463483	G	A	intronic	DNMT3A	NA	NA	NA	intronic	ENSG00000119772	NA	NA	NA	NA	NA	2p23.3	NA	NA	NA	NA	rs2289195	0.38	0.38	0.328	0.359026	0.4324	0.246	0.5058	0.3616	0.2924	0.44	0.24	0.5	0.38	0.4061	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.635388	1.635388	NA	0.412442	0.379256	NA	0.457	NA	2.749058
1377	3	58516383	58516383	G	A	intronic	ACOX2	NA	NA	NA	intronic	ENSG00000168306	NA	NA	NA	NA	NA	3p14.3	NA	NA	NA	NA	rs4387990	0.24	0.24	0.228	0.222843	0.4304	0.1032	0.3401	0.0242	0.318	0.43	0.09	0.37	0.04	0.3681	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.293172	NA	NA	0.45314	0.091693	NA	0.283	NA	2.74836
1377	17	36047417	36047417	A	G	intronic	HNF1B	NA	NA	NA	intronic	ENSG00000108753	NA	NA	NA	NA	NA	17q12	NA	NA	NA	NA	rs3110641	0.67	0.67	0.647	0.654952	0.7445	0.7659	0.7795	0.4145	0.6851	0.76	0.76	0.73	0.4	0.7331	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.20231	NA	NA	0.774186	0.469814	NA	0.681	CLINSIG=non-pathogenic;CLNDBN=Familial_hypoplastic\x2c_glomerulocystic_kidney;CLNREVSTAT=single;CLNACC=RCV000030524.1;CLNDSDB=MedGen:OMIM:SNOMED_CT;CLNDSDBID=C0431693:137920:253864004	2.748214
1377	20	44526783	44526783	G	A	intronic	CTSA	NA	NA	NA	intronic	ENSG00000064601	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs7270170	0.24	0.24	0.212	0.223642	0.4404	0.0327	0.3256	0.0628	0.3425	0.45	0.03	0.34	0.08	0.3709	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.677926	NA	NA	0.440698	0.136632	NA	0.261	NA	2.748002
1377	8	38840591	38840591	C	T	intronic	HTRA4	NA	NA	NA	intronic	ENSG00000169495	NA	NA	NA	NA	NA	8p11.22	NA	NA	NA	NA	rs7814264	0.5	0.5	0.474	0.453874	0.4314	0.749	0.513	0.3109	0.3241	0.44	0.72	0.49	0.33	0.4327	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.382792	NA	NA	0.388372	0.317749	NA	0.486	NA	2.747528
1377	17	28029938	28029938	T	C	intronic	SSH2	NA	NA	NA	ncRNA_intronic	ENSG00000264031	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs3102560	0.61	0.61	0.617	0.615815	0.502	0.7222	0.5922	0.6505	0.593	0.52	0.73	0.58	0.65	0.5632	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.623297	NA	NA	0.52093	0.620291	NA	0.725	NA	2.7472033
1377	7	47869751	47869751	C	T	intronic	PKD1L1	NA	NA	NA	intronic	ENSG00000136273,ENSG00000158683	NA	NA	NA	NA	NA	7p12.3	NA	NA	NA	NA	rs6463451	0.42	0.42	0.406	0.39996	0.4085	0.626	0.3963	0.2239	0.3988	0.41	0.64	0.37	0.23	0.4106	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.258903	NA	NA	0.433837	0.258965	NA	0.471	NA	2.747063
1377	12	47761212	47761212	G	A	intergenic	PCED1B,RPAP3	dist=130769;dist=294503	NA	NA	ncRNA_intronic	ENSG00000257924	NA	NA	NA	NA	NA	12q13.11	NA	NA	NA	NA	rs58616	0.38	0.38	0.363	0.358427	0.4423	0.4911	0.2666	0.1884	0.4305	0.44	0.5	0.27	0.22	0.4041	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.656604	NA	NA	0.40658	0.219749	NA	0.435	NA	2.74702
1377	19	15648148	15648148	C	T	intronic	CYP4F22	NA	NA	NA	intronic	ENSG00000171954	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs4310987	0.38	0.38	0.369	0.357827	0.4254	0.5685	0.3516	0.1044	0.4182	0.44	0.55	0.35	0.13	0.4072	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.034201	NA	NA	0.421047	0.150704	NA	0.304	NA	2.746353
1377	8	145066004	145066004	C	G	intronic	GRINA	NA	NA	NA	intronic	ENSG00000178685,ENSG00000178719	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs67714660	0.38	0.38	0.415	0.392173	0.4304	0.1409	0.2781	0.6112	0.3967	0.42	0.15	0.32	0.62	0.399	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.175478	NA	NA	0.424302	0.598048	ID=COSN168455;OCCURENCE=1(large_intestine),1(endometrium)	0.428	NA	2.746298
1377	13	28610183	28610183	A	G	intronic	FLT3	NA	NA	NA	intronic	ENSG00000122025	NA	NA	NA	Score=395;Name=lod=54	NA	13q12.2	NA	NA	NA	NA	rs2491231	0.62	0.62	0.565	0.563299	0.7724	0.7351	0.7161	0.1944	0.5613	0.78	0.7	0.7	0.21	0.6993	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.06664	NA	NA	0.782093	0.29301	NA	0.507	NA	2.746207
1377	6	38828453	38828453	A	T	intronic	DNAH8	NA	NA	NA	intronic	ENSG00000124721	NA	NA	NA	NA	NA	6p21.2	NA	NA	NA	NA	rs6458073	0.49	0.49	0.447	0.485623	0.3767	0.6944	0.6037	0.3608	0.4673	0.38	0.67	0.56	0.39	0.4535	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.256518	NA	NA	0.424144	0.354157	NA	0.565	NA	2.745656
1377	20	31383530	31383530	C	T	intronic	DNMT3B	NA	NA	NA	intronic	ENSG00000088305	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs875041	0.63	0.63	0.594	0.658546	0.3598	0.9177	0.6167	0.733	0.6278	0.38	0.91	0.58	0.72	0.5069	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.172397	NA	NA	0.387674	0.662052	NA	0.493	NA	2.745626
1378	12	25242776	25242776	C	T	intronic	LRMP	NA	NA	NA	intronic	ENSG00000118308	NA	NA	NA	NA	NA	12p12.1	NA	NA	Name=24	NA	rs10743538	0.74	0.74	0.748	0.734026	0.7416	0.9008	0.7608	0.5756	0.7495	0.73	0.87	0.76	0.6	0.7454	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.318265	NA	NA	0.768081	0.608548	NA	0.609	NA	2.744919
1378	19	35500919	35500919	T	C	intronic	GRAMD1A	NA	NA	NA	intronic	ENSG00000089351	NA	NA	NA	NA	NA	19q13.12	NA	NA	NA	NA	rs11084797	0.45	0.45	0.443	0.463259	0.4254	0.3978	0.4207	0.6203	0.3875	0.42	0.36	0.44	0.62	0.4194	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.046384	NA	NA	0.410806	0.57918	NA	0.471	NA	2.744394
1378	16	21152073	21152073	C	T	intronic	DNAH3	NA	NA	NA	intronic	ENSG00000158486	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs7202719	0.45	0.45	0.507	0.540335	0.4036	0.7024	0.3948	0.5817	0.5613	0.35	0.62	0.38	0.48	0.4564	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.034478	NA	NA	0.39593	0.549523	NA	NA	NA	2.74407
1378	18	12359920	12359920	G	A	intronic	AFG3L2	NA	NA	NA	intronic	ENSG00000141385	NA	NA	NA	NA	NA	18p11.21	NA	Name=c-Jun,TAL1_(SC-12984),Pol2,eGFP-JunD,GATA-1	NA	NA	rs8097342	0.63	0.63	0.634	0.619609	0.7594	0.6062	0.5706	0.4357	0.773	0.76	0.62	0.6	0.48	0.7177	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.325	NA	NA	0.778953	0.501135	ID=COSM148400;OCCURENCE=1(stomach)	0.558	NA	2.743947
1378	20	45358145	45358145	T	G	intronic	SLC2A10	NA	NA	NA	intronic	ENSG00000197496	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs2425906	0.43	0.43	0.42	0.378794	0.4304	0.5952	0.4452	0.1823	0.3211	0.44	0.61	0.46	0.17	0.4097	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.095957	NA	NA	0.416027	0.214934	NA	0.348	NA	2.743873
1378	2	219527005	219527005	C	T	intronic	BCS1L	NA	NA	NA	intronic	ENSG00000074582	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs2303561	0.47	0.47	0.525	0.482827	0.4066	0.1796	0.4107	0.9281	0.3231	0.4	0.21	0.4	0.92	0.428	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.43512	NA	NA	0.421628	0.836813	NA	0.63	NA	2.743772
1378	8	21827833	21827833	A	G	intronic	XPO7	NA	NA	NA	intronic	ENSG00000130227	NA	NA	NA	NA	NA	8p21.3	NA	NA	NA	NA	rs4871903	0.38	0.38	0.377	0.314696	0.4592	0.4405	0.2723	0.2307	0.18	0.46	0.42	0.29	0.25	0.3726	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.971392	NA	NA	0.424581	0.279906	NA	0.457	NA	2.743619
1378	2	219532905	219532905	G	A	intronic	RNF25	NA	NA	NA	intronic	ENSG00000163481	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs2556385	0.47	0.47	0.525	0.482827	0.4066	0.1796	0.4107	0.9281	0.3231	0.4	0.21	0.4	0.92	0.428	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.933483	NA	NA	0.42186	0.836813	NA	NA	NA	2.74354
1378	22	31672752	31672752	A	C	intronic	LIMK2	NA	NA	NA	intronic	ENSG00000182541	NA	NA	NA	Score=606;Name=lod=386	NA	22q12.2	NA	NA	NA	NA	rs5997933	0.81	0.81	0.84	0.840855	0.7266	0.876	0.7435	0.972	0.8139	0.71	0.85	0.76	0.95	0.7771	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.018374	NA	NA	0.752761	0.937788	NA	0.572	NA	2.743539
1378	2	219532903	219532903	C	T	intronic	RNF25	NA	NA	NA	intronic	ENSG00000163481	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs2556384	0.47	0.47	0.524	0.482827	0.4066	0.1796	0.4107	0.9281	0.3231	0.4	0.21	0.4	0.92	0.4281	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.787251	NA	NA	0.42186	0.836813	NA	NA	NA	2.74344
1378	19	17691751	17691751	C	T	intronic	COLGALT1	NA	NA	NA	intronic	ENSG00000130309	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs891184	0.33	0.33	0.307	0.323682	0.4284	0.3651	0.3069	0.1793	0.3804	0.43	0.31	0.32	0.19	0.396	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.755028	NA	NA	0.432326	0.210395	NA	0.341	NA	2.743274
1378	16	21152074	21152074	A	G	intronic	DNAH3	NA	NA	NA	intronic	ENSG00000158486	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs7202568	0.44	0.44	0.503	0.540335	0.4036	0.7024	0.3948	0.5817	0.5613	0.34	0.6	0.38	0.46	0.4562	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.447723	NA	NA	0.397093	0.548841	NA	NA	NA	2.743107
1378	3	9768336	9768336	C	G	intronic	CPNE9	NA	NA	NA	intronic	ENSG00000144550	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs3868893	0.48	0.48	0.46	0.507987	0.3976	0.502	0.5115	0.5802	0.5276	0.41	0.5	0.49	0.56	0.4548	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.319664	1.319664	NA	0.404509	0.553617	NA	0.413	NA	2.743091
1378	2	207006825	207006825	C	A	intronic	NDUFS1	NA	NA	NA	intronic	ENSG00000023228	NA	NA	NA	NA	NA	2q33.3	NA	NA	NA	NA	rs4147718	0.41	0.41	0.379	0.380591	0.4423	0.2133	0.5432	0.4834	0.2352	0.45	0.21	0.54	0.48	0.403	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.641598	1.641598	NA	0.411683	0.474727	NA	0.275	NA	2.743017
1378	8	17920807	17920807	A	G	intronic	ASAH1	NA	NA	NA	intronic	ENSG00000104763	NA	NA	NA	NA	NA	8p22	NA	NA	NA	NA	rs7824644	0.37	0.37	0.364	0.317891	0.6272	0.2044	0.3573	0.1702	0.2883	0.64	0.2	0.36	0.16	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.205817	NA	NA	0.629793	0.226879	NA	0.391	NA	2.743007
1378	1	32127911	32127911	C	T	intronic	COL16A1	NA	NA	NA	intronic	ENSG00000084636	NA	NA	NA	NA	NA	1p35.2	NA	NA	NA	NA	rs2271927	0.51	0.51	0.549	0.472444	0.4016	0.6389	0.4741	0.5182	0.3108	0.42	0.63	0.46	0.52	0.4579	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.366808	NA	NA	0.398175	0.480155	NA	0.42	NA	2.742325
1378	10	43316170	43316170	A	G	intronic	BMS1	NA	NA	NA	intronic	ENSG00000165733	NA	NA	NA	NA	NA	10q11.21	NA	NA	NA	NA	rs3982211	0.52	0.52	0.466	0.558307	0.4185	0.626	0.4885	0.6271	0.589	0.39	0.62	0.5	0.61	0.461	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.412346	NA	NA	0.378763	0.561753	NA	0.181	NA	2.741737
1378	2	241726646	241726646	A	G	intronic	KIF1A	NA	NA	NA	intronic	ENSG00000130294	NA	NA	NA	NA	NA	2q37.3	NA	NA	NA	NA	rs2288746	0.49	0.49	0.517	0.483227	0.4046	0.4365	0.4107	0.7678	0.2791	0.4	0.44	0.4	0.77	0.423	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.3598	NA	NA	0.430952	0.708907	NA	0.659	NA	2.741448
1378	11	124955977	124955977	C	T	intronic	SLC37A2	NA	NA	NA	intronic	ENSG00000134955	NA	NA	NA	NA	NA	11q24.2	NA	NA	NA	NA	rs3808995	0.62	0.62	0.661	0.646965	0.6332	0.3502	0.536	0.9523	0.6329	0.63	0.37	0.56	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.374999	NA	NA	0.625393	0.895954	ID=COSN164084;OCCURENCE=1(NS)	0.623	NA	2.741407
1378	21	11124187	11124187	C	T	intergenic	BAGE,NONE	dist=25250;dist=NONE	NA	NA	intergenic	ENSG00000187172,ENSG00000231962	dist=25207;dist=29650	NA	NA	NA	NA	21p11.1	NA	NA	NA	NA	rs12626566	NA	NA	0.274	0.593051	0.5924	0.5833	0.585	0.6074	0.59	NA	NA	NA	NA	NA	0.11	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.82701	NA	NA	NA	NA	NA	0.094	NA	2.7409334
1378	1	235628908	235628908	G	A	UTR3	B3GALNT2	NM_001277155:c.*28C>T	NA	NA	UTR3	ENSG00000162885	ENST00000313984:c.*28C>T	NA	NA	NA	NA	1q42.3	NA	NA	NA	NA	rs1305556	0.65	0.65	0.64	0.673522	0.5129	0.8413	0.7061	0.5726	0.7791	0.52	0.85	0.7	0.59	0.5818	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.352528	NA	NA	0.498023	0.545847	NA	0.645	NA	2.7406104
1378	12	52404618	52404618	T	G	intronic	GRASP	NA	NA	NA	intronic	ENSG00000161835	NA	NA	NA	NA	NA	12q13.13	NA	Name=MafK_(ab50322),MafF_(M8194),MafK_(SC-477)	NA	NA	rs1298913	0.7	0.7	0.739	0.74361	0.7664	0.6329	0.4467	0.9039	0.8282	0.77	0.6	0.48	0.88	0.7301	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.453804	NA	NA	0.763953	0.884249	NA	0.848	NA	2.739547
1378	7	87840263	87840263	T	C	intronic	SRI	NA	NA	NA	intronic	ENSG00000075142	NA	NA	NA	NA	NA	7q21.12	NA	NA	NA	NA	rs6964163	0.37	0.37	0.36	0.340455	0.4463	0.1756	0.3818	0.4017	0.2894	0.46	0.19	0.4	0.42	0.3863	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.398516	NA	NA	0.428022	0.405356	NA	0.268	NA	2.739378
1378	2	96012907	96012907	C	G	intronic	KCNIP3	NA	NA	NA	intronic	ENSG00000115041	NA	NA	NA	NA	NA	2q11.1	NA	NA	Name=30	NA	rs7602807	0.73	0.73	0.749	0.740216	0.7584	0.5933	0.6311	0.9115	0.7188	0.75	0.59	0.68	0.9	0.7529	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.142036	NA	NA	0.749535	0.877672	NA	0.703	NA	2.739165
1378	5	135015769	135015769	G	A	intergenic	LOC340074,SLC25A48	dist=26145;dist=154596	NA	NA	intergenic	ENSG00000251045,ENSG00000238393	dist=26145;dist=33039	NA	NA	NA	NA	5q31.1	NA	NA	NA	NA	rs10077295	0.51	0.51	0.489	0.495208	0.5944	0.5962	0.5231	0.2398	0.6145	0.61	0.59	0.52	0.25	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.430367	NA	NA	NA	NA	NA	0.486	NA	2.7389334
1378	15	41819322	41819322	C	T	intronic	RPAP1	NA	NA	NA	intronic	ENSG00000103932	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs2297380	0.32	0.32	0.316	0.311901	0.4384	0.2798	0.3357	0.121	0.456	0.43	0.32	0.34	0.13	0.39	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.118426	NA	NA	0.432907	0.177939	NA	0.37	NA	2.738693
1378	20	47361519	47361519	T	C	intronic	PREX1	NA	NA	NA	intronic	ENSG00000124126	NA	NA	NA	NA	NA	20q13.13	NA	NA	NA	NA	rs3746816	0.38	0.38	0.339	0.373802	0.3966	0.3234	0.4726	0.3026	0.4284	0.4	0.34	0.48	0.31	0.4204	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.268505	NA	NA	0.444419	0.352247	NA	0.5	NA	2.738581
1378	8	28651300	28651300	A	C	intronic	INTS9	NA	NA	NA	intronic	ENSG00000104299	NA	NA	NA	NA	NA	8p21.1	NA	NA	NA	NA	rs2665912	0.3	0.3	NA	0.274161	0.4314	0.1647	0.4236	0.1362	0.3057	0.4	0.18	0.43	0.17	0.3683	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.884256	2.884256	NA	0.461852	0.193233	NA	NA	NA	2.738448
1378	2	88999476	88999476	G	A	intronic	RPIA	NA	NA	NA	intronic	ENSG00000153574	NA	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs1158603	0.49	0.49	0.507	0.46885	0.4155	0.3581	0.4784	0.7474	0.2546	0.43	0.38	0.44	0.74	0.4237	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.11861	NA	NA	0.423124	0.704655	NA	0.601	NA	2.737676
1378	2	240111477	240111477	A	T	intronic	HDAC4	NA	NA	NA	intronic	ENSG00000068024	NA	NA	NA	NA	NA	2q37.3	NA	NA	NA	NA	rs531993	0.52	0.52	0.509	0.561502	0.6421	0.4216	0.4597	0.5363	0.729	0.64	0.42	0.47	0.48	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.010371	NA	NA	0.620282	0.534522	NA	0.471	NA	2.737618
1378	2	202352649	202352649	A	G	intronic	ALS2CR11	NA	NA	NA	intronic	ENSG00000155754	NA	NA	NA	NA	NA	2q33.1	NA	NA	NA	NA	rs2714481	0.53	0.53	0.545	0.516174	0.4145	0.5159	0.5014	0.7254	0.3487	0.41	0.52	0.52	0.72	0.4491	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.295124	NA	NA	0.399068	0.680227	NA	0.551	NA	2.737332
1378	18	47373466	47373466	G	A	intronic	MYO5B	NA	NA	NA	ncRNA_intronic	ENSG00000267322	NA	NA	NA	NA	NA	18q21.1	NA	NA	NA	NA	rs3017176	0.5	0.5	0.483	0.476238	0.5388	0.3958	0.621	0.4357	0.4468	0.53	0.45	0.62	0.42	0.5133	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.527395	NA	NA	0.543908	0.453028	NA	0.478	NA	2.7373253
1378	6	31113276	31113276	G	A	intronic	CCHCR1	NA	NA	NA	intronic	ENSG00000204536	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs886400	NA	NA	NA	0.575879	0.6461	0.3968	0.5706	0.6861	0.5429	NA	NA	NA	NA	0.6048	0.014	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.14956	NA	NA	0.011977	0.014299	NA	NA	NA	2.737123
1378	1	223951841	223951841	T	C	intronic	CAPN2	NA	NA	NA	intronic	ENSG00000162909	NA	NA	NA	NA	NA	1q41	NA	NA	NA	NA	rs751128	0.43	0.43	0.398	0.429513	0.4284	0.3879	0.4207	0.5197	0.3579	0.43	0.38	0.42	0.51	0.414	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.12061	NA	NA	0.420581	0.484567	NA	0.413	NA	2.737019
1378	6	148761456	148761456	G	C	intronic	SASH1	NA	NA	NA	intronic	ENSG00000111961	NA	NA	NA	NA	NA	6q24.3	NA	NA	NA	NA	rs2272998	0.41	0.41	0.396	0.46845	0.4076	0.3978	0.4294	0.4107	0.7096	0.41	0.39	0.41	0.41	0.4488	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.102837	NA	NA	0.406628	0.413073	NA	0.399	NA	2.736972
1378	2	122004596	122004596	C	G	intronic	TFCP2L1	NA	NA	NA	intronic	ENSG00000115112	NA	NA	NA	NA	NA	2q14.2	NA	NA	NA	NA	rs2252862	0.59	0.59	0.603	0.629193	0.4066	0.6478	0.4568	0.8971	0.5992	0.42	0.65	0.43	0.88	0.489	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.814776	NA	NA	0.367558	0.813663	NA	0.703	NA	2.736842
1378	1	227920061	227920061	T	G	ncRNA_UTR3	JMJD4	NA	NA	NA	UTR3	ENSG00000081692	ENST00000366758:c.*32A>C,ENST00000438896:c.*32A>C	NA	NA	NA	NA	1q42.13	NA	NA	NA	NA	rs1060295	0.74	0.74	0.724	0.748802	0.5557	0.7907	0.7104	0.9531	0.6554	0.56	0.79	0.7	0.96	0.6346	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.760094	NA	NA	0.572992	0.895587	NA	0.659	NA	2.736708
1378	20	10366398	10366398	G	A	intergenic	SNAP25,MKKS	dist=78332;dist=19030	NA	NA	upstream	ENSG00000230750	NA	NA	NA	NA	NA	20p12.2	NA	NA	NA	NA	rs2327293	0.69	0.69	0.678	0.692093	0.7634	0.5248	0.8401	0.6982	0.6779	0.75	0.52	0.81	0.72	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.747876	NA	NA	NA	NA	NA	0.449	NA	2.7366
1378	7	2623351	2623351	G	A	intronic	IQCE	NA	NA	NA	intronic	ENSG00000106012	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs13242369	0.33	0.33	0.306	0.319289	0.4423	0.1597	0.3213	0.3427	0.3241	0.46	0.15	0.32	0.37	0.3808	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.435945	NA	NA	0.440453	0.3345	NA	0.333	NA	2.736447
1378	6	94120192	94120192	G	A	intronic	EPHA7	NA	NA	NA	UTR3	ENSG00000135333	ENST00000369297:c.*19C>T	NA	NA	NA	NA	6q16.1	NA	NA	NA	NA	rs474809	0.64	0.64	0.615	0.632987	0.4553	0.6905	0.5908	0.8366	0.5112	0.48	0.72	0.57	0.83	0.5384	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.055548	NA	NA	0.436846	0.785293	NA	0.58	NA	2.7361207
1378	4	3240159	3240159	C	T	intronic	HTT	NA	NA	NA	intronic	ENSG00000197386	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs2071704	0.42	0.42	0.391	0.409545	0.4245	0.3234	0.4092	0.5325	0.317	0.44	0.31	0.43	0.51	0.4207	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.406147	NA	NA	0.41878	0.522569	NA	0.471	NA	2.73602
1378	4	8415982	8415982	C	T	intronic	ACOX3	NA	NA	NA	intronic	ENSG00000087008	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs2245515	0.4	0.4	0.391	0.399561	0.4225	0.4266	0.3631	0.3306	0.4673	0.43	0.41	0.37	0.36	0.4108	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.057456	NA	NA	0.43093	0.343849	NA	0.486	NA	2.73577
1379	12	26752897	26752897	C	T	intronic	ITPR2	NA	NA	NA	intronic	ENSG00000123104	NA	NA	NA	NA	NA	12p11.23	NA	NA	NA	NA	rs12832680	0.3	0.3	0.298	0.299521	0.4453	0.0486	0.2421	0.3631	0.363	0.44	0.04	0.27	0.4	0.3806	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.328896	NA	NA	0.441126	0.382678	NA	0.297	NA	2.732974
1379	17	25630388	25630388	T	C	intronic	WSB1	NA	NA	NA	intronic	ENSG00000109046	NA	NA	NA	NA	NA	17q11.1	NA	NA	NA	NA	rs2270761	0.45	0.45	0.458	0.511981	0.3887	0.2609	0.3833	0.8548	0.5256	0.38	0.25	0.39	0.84	0.4537	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.54473	NA	NA	0.424651	0.791875	NA	0.536	NA	2.732949
1379	20	23753425	23753425	A	C	intergenic	CST1,CST2	dist=21851;dist=50979	NA	NA	intergenic	ENSG00000170373,ENSG00000230908	dist=21520;dist=25353	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	rs6049095	0.55	0.55	0.562	0.553514	0.6004	0.5308	0.3905	0.5946	0.589	0.61	0.51	0.44	0.58	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.474348	NA	NA	NA	NA	NA	NA	NA	2.7329334
1379	15	90245298	90245298	G	C	intronic	WDR93	NA	NA	NA	intronic	ENSG00000140527	NA	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs4306477	0.36	0.36	0.366	0.392971	0.4085	0.2063	0.3617	0.5053	0.4397	0.41	0.22	0.39	0.44	0.4091	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.574833	NA	NA	0.449639	0.486591	NA	0.522	NA	2.732761
1379	17	21206556	21206556	C	T	intronic	MAP2K3	NA	NA	NA	intronic	ENSG00000034152	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs736103	0.52	0.52	0.58	0.210663	0.2197	0.2163	0.2507	0.1271	0.2802	0.52	0.52	0.54	0.5	0.5249	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.939031	NA	NA	0.523605	0.511802	NA	0.507	NA	2.731795
1379	11	101818728	101818728	A	G	intronic	KIAA1377	NA	NA	NA	intronic	ENSG00000110318	NA	NA	NA	NA	NA	11q22.1	NA	NA	NA	NA	rs11225080	0.42	0.42	0.423	0.376797	0.4354	0.4911	0.3112	0.3351	0.3016	0.42	0.52	0.33	0.36	0.3997	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.547002	1.547002	NA	0.433108	0.359283	NA	0.37	NA	2.731792
1379	16	70818759	70818759	A	G	intronic	VAC14	NA	NA	NA	intronic	ENSG00000103043	NA	NA	NA	NA	NA	16q22.2	NA	NA	NA	NA	rs2271047	0.32	0.32	0.27	0.3127	0.4433	0.3294	0.3401	0.062	0.4806	0.45	0.34	0.36	0.08	0.401	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.29373	NA	NA	0.42407	0.124886	NA	0.297	NA	2.73163
1379	19	3198777	3198777	A	G	intronic	NCLN	NA	NA	NA	intronic	ENSG00000125912	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs311621	0.45	0.45	0.416	0.452276	0.4254	0.4891	0.4784	0.4455	0.4325	0.42	0.49	0.46	0.44	0.433	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.639658	NA	NA	0.41	0.45892	NA	0.413	NA	2.7316
1379	6	29858294	29858294	A	G	ncRNA_exonic	HLA-H	NA	NA	NA	downstream	ENSG00000206341	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs3115601	0.69	0.69	0.702	0.721246	0.7416	0.6458	0.7896	0.7489	0.6922	0.71	0.56	0.71	0.79	0.6935	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.888022	NA	NA	NA	NA	NA	0.616	NA	2.7315666
1379	14	24793647	24793647	T	C	intronic	ADCY4	NA	NA	NA	intronic	ENSG00000129467	NA	NA	NA	NA	NA	14q12	NA	NA	NA	NA	rs6573722	0.51	0.51	0.485	0.538938	0.4076	0.6468	0.5389	0.5287	0.5767	0.42	0.63	0.54	0.51	0.4668	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.837811	1.837811	NA	0.394651	0.492283	NA	0.362	NA	2.730949
1379	3	98540931	98540931	T	C	intronic	DCBLD2	NA	NA	NA	intronic	ENSG00000057019	NA	NA	NA	NA	NA	3q12.1	NA	NA	NA	NA	rs9843214	0.35	0.35	0.35	0.359625	0.4076	0.2262	0.3559	0.4501	0.3282	0.42	0.19	0.34	0.41	0.4194	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.956475	NA	NA	0.442742	0.4629	NA	0.37	NA	2.730258
1379	19	18218444	18218444	A	G	intronic	MAST3	NA	NA	NA	intronic	ENSG00000099308	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs62123561	0.36	0.36	0.356	0.320687	0.4453	0.3264	0.4121	0.2648	0.1973	0.47	0.31	0.4	0.24	0.3957	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.076118	NA	NA	0.4289	0.262308	ID=COSN165761;OCCURENCE=1(NS)	0.377	NA	2.7301
1379	5	114728073	114728073	C	T	intergenic	CCDC112,FEM1C	dist=95615;dist=128535	NA	NA	upstream	ENSG00000249026	NA	NA	NA	NA	NA	5q22.3	NA	NA	NA	NA	rs269537	0.78	0.78	0.783	0.794728	0.7704	0.8234	0.7565	0.7602	0.864	0.77	0.82	0.79	0.74	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.688427	NA	NA	NA	NA	NA	0.696	NA	2.7296
1379	4	149116035	149116035	A	G	intronic	NR3C2	NA	NA	NA	ncRNA_intronic	ENSG00000250354	NA	NA	NA	NA	NA	4q31.23	NA	NA	NA	NA	rs4835500	0.59	0.59	0.584	0.611222	0.5089	0.7698	0.5793	0.5393	0.6728	0.5	0.75	0.57	0.56	0.5758	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.026784	NA	NA	0.519079	0.552727	NA	0.543	NA	2.7295543
1379	6	24559433	24559433	A	G	intronic	KIAA0319	NA	NA	NA	intronic	ENSG00000137261	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs3903801	0.26	0.26	0.254	0.246605	0.4344	0.2202	0.3112	0.0378	0.317	0.43	0.2	0.32	0.02	0.3742	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.788692	NA	NA	0.462209	0.108942	NA	0.203	NA	2.729191
1379	10	103908080	103908080	G	A	intronic	PPRC1	NA	NA	NA	intronic	ENSG00000148840	NA	NA	NA	NA	NA	10q24.32	NA	NA	NA	NA	rs3740405	0.26	0.26	0.227	0.269968	0.4155	0.1409	0.4236	0.0424	0.4519	0.42	0.14	0.4	0.07	0.4045	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.01863	NA	NA	0.45093	0.107808	NA	0.275	NA	2.72907
1379	X	205373	205373	A	G	intronic	PLCXD1	NA	NA	NA	intronic	ENSG00000182378	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs6644980	0.56	0.56	NA	NA	NA	NA	NA	NA	NA	0.67	0.67	0.58	0.25	0.5996	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.57863	NA	NA	0.67237	0.274626	NA	0.406	NA	2.72803
1379	5	1225801	1225801	G	A	intronic	SLC6A18	NA	NA	NA	intronic	ENSG00000164363	NA	NA	NA	NA	NA	5p15.33	NA	NA	NA	NA	rs7704363	0.4	0.4	0.416	0.378195	0.4443	0.2222	0.4669	0.4274	0.3415	0.43	0.25	0.46	0.49	0.4045	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.867957	NA	NA	0.423256	0.399455	NA	0.37	NA	2.727944
1379	11	5701409	5701409	G	C	UTR5	TRIM5	NM_033034:c.-2C>G,NM_033093:c.-2C>G,NM_033092:c.-2C>G	NA	NA	UTR5	ENSG00000132256	ENST00000305836:c.-2C>G,ENST00000396855:c.-2C>G,ENST00000380034:c.-2C>G,ENST00000380027:c.-2C>G,ENST00000433961:c.-2C>G,ENST00000396847:c.-2C>G,ENST00000396853:c.-2C>G,ENST00000412903:c.-2C>G,ENST00000419850:c.-2C>G	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs3824949	0.41	0.41	0.39	0.39976	0.5348	0.4355	0.4741	0.1051	0.5695	0.54	0.45	0.49	0.12	0.51	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.470357	NA	NA	0.560666	0.186221	NA	0.42	NA	2.7278674
1379	3	37107470	37107470	G	A	intronic	LRRFIP2	NA	NA	NA	intronic	ENSG00000093167	NA	NA	NA	NA	NA	3p22.2	NA	NA	NA	NA	rs2302503	0.34	0.34	0.334	0.301518	0.4394	0.0774	0.3775	0.3911	0.2157	0.45	0.09	0.43	0.39	0.373	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.57722	NA	NA	0.459767	0.364049	NA	0.449	NA	2.727833
1379	18	51880841	51880841	C	T	intronic	STARD6	NA	NA	NA	intronic	ENSG00000174448	NA	NA	NA	NA	NA	18q21.2	NA	NA	NA	NA	rs7242085	0.43	0.43	0.371	0.393371	0.4294	0.6736	0.4006	0.1029	0.455	0.44	0.69	0.39	0.12	0.4263	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.841871	NA	NA	0.416667	0.136405	NA	0.384	NA	2.727633
1379	1	2338126	2338126	C	A	intronic	PEX10	NA	NA	NA	intronic	ENSG00000157911	NA	NA	NA	NA	NA	1p36.32	NA	NA	NA	NA	rs3795269	0.35	0.35	0.336	0.339058	0.4274	0.253	0.4539	0.2859	0.3272	0.44	0.21	0.45	0.29	0.4176	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.755011	NA	NA	0.427791	0.294184	NA	0.384	NA	2.727209
1379	1	186055371	186055371	A	G	ncRNA_intronic	MIR548F1	NA	NA	NA	intronic	ENSG00000143341	NA	NA	NA	NA	NA	1q31.1	NA	NA	NA	NA	rs6425017	0.65	0.65	0.658	0.661342	0.5169	0.5794	0.6599	0.9213	0.544	0.53	0.61	0.66	0.9	0.5783	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.538587	NA	NA	0.511047	0.856721	NA	0.703	NA	2.7270863
1379	6	47654831	47654831	A	G	intronic	GPR111	NA	NA	NA	intronic	ENSG00000153294,ENSG00000164393	NA	NA	NA	NA	NA	6p12.3	NA	NA	NA	NA	rs1556132	0.47	0.47	0.486	0.51897	0.6262	0.3085	0.4352	0.469	0.7526	0.62	0.29	0.47	0.47	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.245715	NA	NA	0.646763	0.443642	NA	0.428	NA	2.727037
1379	1	186081918	186081918	C	T	ncRNA_intronic	MIR548F1	NA	NA	NA	intronic	ENSG00000143341	NA	NA	NA	NA	NA	1q31.1	NA	NA	NA	NA	rs7555520	0.67	0.67	0.672	0.686102	0.5129	0.5913	0.6715	0.969	0.59	0.53	0.62	0.68	0.96	0.5854	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.812598	NA	NA	0.508023	0.893327	NA	0.703	NA	2.7270103
1379	8	95182801	95182801	G	T	intronic	CDH17	NA	NA	NA	intronic	ENSG00000079112	NA	NA	NA	NA	NA	8q22.1	NA	NA	NA	NA	rs72670354	0.33	0.33	0.317	0.335064	0.4294	0.3185	0.2608	0.2057	0.4826	0.42	0.33	0.28	0.21	0.3923	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.071703	2.071703	NA	0.451395	0.221062	ID=COSN168372;OCCURENCE=1(large_intestine)	0.333	NA	2.726905
1379	3	14174146	14174146	T	C	intronic	TMEM43	NA	NA	NA	intronic	ENSG00000170876	NA	NA	NA	NA	NA	3p25.1	NA	NA	NA	NA	rs4685075	0.55	0.55	0.499	0.557308	0.3956	0.6786	0.5893	0.6248	0.4847	0.4	0.66	0.59	0.64	0.4707	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.066112	NA	NA	0.40686	0.568316	NA	0.435	NA	2.72684
1379	6	47654662	47654662	A	G	intronic	GPR111	NA	NA	NA	intronic	ENSG00000153294,ENSG00000164393	NA	NA	NA	NA	NA	6p12.3	NA	NA	NA	NA	rs10485315	0.48	0.48	0.486	0.51897	0.6262	0.3085	0.4352	0.469	0.7526	0.62	0.3	0.49	0.48	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.218688	NA	NA	0.647077	0.442197	NA	0.428	NA	2.726723
1379	4	3216815	3216815	C	G	intronic	HTT	NA	NA	NA	intronic	ENSG00000197386	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs916171	0.45	0.45	0.416	0.430711	0.4165	0.377	0.4179	0.5787	0.3098	0.43	0.39	0.42	0.56	0.439	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.980815	NA	NA	0.417925	0.567582	NA	0.536	NA	2.726575
1379	20	31374991	31374991	G	A	intronic	DNMT3B	NA	NA	NA	intronic	ENSG00000088305	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs4911107	0.58	0.58	0.556	0.617612	0.3628	0.9216	0.611	0.534	0.684	0.38	0.91	0.58	0.5	0.5075	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.707474	NA	NA	0.403605	0.495461	NA	0.428	NA	2.726095
1379	8	134464676	134464676	A	G	intergenic	NDRG1,ST3GAL1	dist=155129;dist=2415	NA	NA	intergenic	ENSG00000225259,ENSG00000008513	dist=43205;dist=2415	NA	NA	NA	NA	8q24.22	NA	NA	NA	NA	rs741901	0.71	0.71	0.673	0.736621	0.6074	0.9851	0.7363	0.5772	0.8292	0.61	0.98	0.69	0.56	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.363246	NA	NA	NA	NA	NA	0.732	NA	2.7259334
1379	7	150939193	150939193	A	G	intronic	SMARCD3	NA	NA	NA	intronic	ENSG00000082014	NA	NA	NA	NA	NA	7q36.1	NA	NA	NA	NA	rs4725398	0.47	0.47	0.441	0.435304	0.4483	0.7222	0.4164	0.2716	0.3609	0.44	0.69	0.43	0.28	0.4168	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.713732	NA	NA	0.409651	0.300045	NA	0.413	NA	2.725249
1380	14	23872666	23872666	T	C	intronic	MYH6	NA	NA	NA	intronic	ENSG00000197616	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs434273	0.79	0.79	0.795	0.784944	0.7505	0.6617	0.7853	0.9841	0.6779	0.75	0.68	0.82	0.98	0.7565	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.277367	NA	NA	0.768023	0.945302	NA	0.717	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000037540.1;CLNDSDB=.;CLNDSDBID=.	2.724977
1380	10	105942304	105942304	T	C	intronic	WDR96	NA	NA	NA	intronic	ENSG00000197748	NA	NA	NA	NA	NA	10q25.1	NA	NA	NA	NA	rs569856	0.46	0.46	0.475	0.506589	0.4304	0.3958	0.3631	0.7118	0.5235	0.42	0.36	0.38	0.7	0.4399	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.214594	NA	NA	0.404862	0.663187	NA	0.406	NA	2.724838
1380	17	78090928	78090928	G	A	intronic	GAA	NA	NA	NA	intronic	ENSG00000171298	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs2304832	0.76	0.76	0.775	0.789337	0.7654	0.6498	0.5965	0.9834	0.8323	0.76	0.66	0.61	0.98	0.757	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.392117	NA	NA	0.753023	0.948252	NA	0.833	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000078169.1;CLNDSDB=.;CLNDSDBID=.	2.724577
1380	20	18167977	18167977	T	C	exonic	CSRP2BP	NA	synonymous SNV	CSRP2BP:NM_020536:exon10:c.T2223C:p.P741P	exonic	ENSG00000149474	NA	synonymous SNV	ENSG00000149474:ENST00000489634:exon9:c.T1839C:p.P613P,ENSG00000149474:ENST00000435364:exon10:c.T2223C:p.P741P,ENSG00000149474:ENST00000278816:exon11:c.T2223C:p.P741P,ENSG00000149474:ENST00000377681:exon11:c.T2220C:p.P740P	NA	NA	20p11.23	NA	NA	NA	NA	rs2747404	0.99	0.99	0.992	0.991014	0.9781	1	0.9769	0.9977	0.9959	0.99	1	0.99	0.99	0.9859	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.580522	NA	NA	0.978488	0.995461	NA	0.971	NA	2.7241786
1380	9	139405261	139405261	C	T	intronic	NOTCH1	NA	NA	NA	intronic	ENSG00000148400	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs3125001	0.61	0.61	0.609	0.585463	0.4284	0.872	0.513	0.6952	0.3548	0.42	0.85	0.51	0.71	0.4725	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.528985	NA	NA	0.375	0.621711	NA	0.565	NA	2.7241
1380	2	55200800	55200800	T	G	intronic	RTN4	NA	NA	NA	intronic	ENSG00000115310	NA	NA	NA	NA	NA	2p16.1	NA	NA	NA	NA	rs2255112	0.42	0.42	0.398	0.345248	0.4414	0.6607	0.3991	0.0832	0.2372	0.43	0.68	0.42	0.11	0.4026	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.509721	NA	NA	0.432093	0.140717	NA	0.391	NA	2.723907
1380	7	131815343	131815343	G	A	intronic	PLXNA4	NA	NA	NA	intronic	ENSG00000221866	NA	NA	NA	NA	NA	7q32.3	NA	NA	Name=30	NA	rs10954361	0.72	0.72	0.695	0.66853	0.7714	0.8333	0.6037	0.4826	0.6902	0.78	0.83	0.65	0.53	0.7378	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.838754	1.838754	NA	0.766938	0.554899	NA	0.703	NA	2.723862
1380	3	193080344	193080344	C	T	intronic	ATP13A5	NA	NA	NA	intronic	ENSG00000187527	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs12636830	0.42	0.42	0.385	0.423722	0.4125	0.5764	0.4337	0.2428	0.5153	0.41	0.56	0.4	0.28	0.4372	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.052646	NA	NA	0.426512	0.28325	NA	0.297	NA	2.723788
1380	9	135073309	135073309	G	A	intronic	NTNG2	NA	NA	NA	intronic	ENSG00000196358	NA	NA	NA	NA	NA	9q34.13	NA	NA	NA	NA	rs11243663	0.39	0.39	0.399	0.386182	0.4414	0.502	0.3314	0.2405	0.4458	0.44	0.48	0.32	0.27	0.4039	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.09787	NA	NA	0.430933	0.232339	NA	0.29	NA	2.723767
1380	19	33149768	33149768	G	A	intronic	ANKRD27	NA	NA	NA	intronic	ENSG00000105186	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs259251	0.41	0.41	0.388	0.373602	0.6252	0.252	0.4712	0.1573	0.4632	0.63	0.28	0.5	0.15	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.055787	NA	NA	0.65118	0.242009	NA	0.399	NA	2.72362
1380	10	13275691	13275691	G	T	intronic	UCMA	NA	NA	NA	intronic	ENSG00000165623	NA	NA	NA	NA	NA	10p13	NA	NA	NA	NA	rs10796042	0.33	0.33	0.296	0.28734	0.4284	0.245	0.2867	0.2284	0.2658	0.42	0.27	0.36	0.21	0.3826	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.197313	NA	NA	0.465465	0.282342	NA	0.326	NA	2.723535
1380	6	38781931	38781931	A	T	intronic	DNAH8	NA	NA	NA	intronic	ENSG00000124721	NA	NA	NA	NA	NA	6p21.2	NA	NA	NA	NA	rs1738221	0.5	0.5	0.46	0.504593	0.3748	0.7946	0.5908	0.3238	0.5225	0.38	0.78	0.55	0.33	0.47	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.294892	1.294892	NA	0.431728	0.340754	NA	0.543	NA	2.723472
1380	7	133981227	133981227	G	A	intronic	SLC35B4	NA	NA	NA	intronic	ENSG00000205060	NA	NA	NA	NA	NA	7q33	NA	NA	NA	NA	rs1862052	0.27	0.27	0.241	0.29373	0.4374	0.122	0.4942	0.0477	0.5133	0.45	0.12	0.46	0.04	0.3993	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.552416	NA	NA	0.440116	0.117113	ID=COSM150393;OCCURENCE=1(stomach)	0.246	NA	2.723184
1380	8	27255325	27255325	C	T	intronic	PTK2B	NA	NA	NA	intronic	ENSG00000120899	NA	NA	NA	NA	NA	8p21.2	NA	NA	NA	NA	rs2241650	0.34	0.34	0.323	0.317692	0.4304	0.2748	0.3818	0.2057	0.3517	0.44	0.27	0.38	0.22	0.4	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.864134	NA	NA	0.446512	0.23241	NA	0.304	NA	2.723088
1380	12	3047466	3047466	G	A	intronic	TULP3	NA	NA	NA	intronic	ENSG00000078246	NA	NA	NA	NA	NA	12p13.33	NA	NA	NA	NA	rs2074987	0.51	0.51	0.492	0.515775	0.4215	0.5615	0.4553	0.6354	0.4468	0.42	0.55	0.44	0.65	0.4484	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.316326	NA	NA	0.407326	0.59714	NA	0.464	NA	2.722774
1380	17	9783855	9783855	A	G	intronic	GLP2R	NA	NA	NA	intronic	ENSG00000065325	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs2277690	0.45	0.45	0.443	0.46226	0.4085	0.2917	0.4597	0.6732	0.41	0.41	0.27	0.46	0.7	0.437	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.630671	NA	NA	0.431744	0.609623	ID=COSN165328;OCCURENCE=1(breast)	0.572	NA	2.722756
1380	11	119003322	119003322	C	A	intronic	HINFP	NA	NA	NA	intronic	ENSG00000172273	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs662069	0.44	0.44	0.409	0.400958	0.4433	0.7183	0.2824	0.1664	0.4315	0.44	0.74	0.33	0.18	0.4146	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.33937	NA	NA	0.419907	0.191591	NA	0.37	NA	2.722193
1380	14	58600107	58600107	T	A	intronic	C14orf37	NA	NA	NA	intronic	ENSG00000139971	NA	NA	NA	NA	NA	14q23.1	NA	NA	NA	NA	rs2180520	0.33	0.33	0.139	0.348842	0.5109	0.3095	0.3256	0.2526	0.3691	0.41	0.29	0.32	0.23	0.3901	0.41	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.174774	NA	NA	0.377491	0.17712	NA	0.159	NA	2.721509
1380	16	88664758	88664758	T	C	intronic	ZC3H18	NA	NA	NA	intronic	ENSG00000158545	NA	NA	NA	NA	NA	16q24.2	NA	NA	NA	NA	rs3887592	0.43	0.43	0.411	0.407149	0.4095	0.5784	0.4928	0.2874	0.3292	0.43	0.59	0.43	0.24	0.45	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.829725	NA	NA	0.419535	0.322111	NA	0.333	NA	2.720965
1380	10	102689217	102689217	T	C	intronic	FAM178A	NA	NA	NA	intronic	ENSG00000119906	NA	NA	NA	NA	NA	10q24.31	NA	NA	NA	NA	rs2273654	0.26	0.26	0.251	0.261382	0.4493	0.0685	0.4049	0.1309	0.3415	0.45	0.08	0.37	0.1	0.3904	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.675315	NA	NA	0.439419	0.170449	NA	0.341	NA	2.720881
1380	14	47314938	47314938	C	T	intronic	MDGA2	NA	NA	NA	intronic	ENSG00000139915	NA	NA	NA	NA	NA	14q21.3	NA	NA	NA	NA	rs1388568	0.44	0.44	0.41	0.420727	0.3976	0.627	0.6383	0.1793	0.4039	0.41	0.63	0.59	0.18	0.4531	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.168474	NA	NA	0.428484	0.237861	NA	0.312	NA	2.720816
1380	10	127843740	127843740	G	T	intronic	ADAM12	NA	NA	NA	intronic	ENSG00000148848	NA	NA	NA	NA	NA	10q26.2	NA	NA	NA	NA	rs1466359	0.53	0.53	0.517	0.538738	0.4294	0.7202	0.4568	0.466	0.6207	0.43	0.74	0.48	0.48	0.4703	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.374886	NA	NA	0.38	0.433954	NA	0.543	NA	2.7203
1380	9	12704725	12704725	C	T	intronic	TYRP1	NA	NA	NA	ncRNA_intronic	ENSG00000235448	NA	NA	NA	NA	NA	9p23	NA	NA	NA	NA	rs2733832	0.28	0.28	0.246	0.220847	0.5716	0.0179	0.353	0.0545	0.2004	0.58	0.01	0.38	0.05	0.4469	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.490343	NA	NA	0.594535	0.141852	NA	0.384	NA	2.7202983
1380	12	4771682	4771682	G	A	intronic	NDUFA9	NA	NA	NA	intronic	ENSG00000139180	NA	NA	NA	NA	NA	12p13.32	NA	NA	NA	NA	rs2267549	0.37	0.37	0.341	0.346845	0.4185	0.3204	0.5202	0.1815	0.4008	0.44	0.33	0.49	0.21	0.4251	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.95279	NA	NA	0.436163	0.237857	NA	0.377	NA	2.720237
1380	17	39596538	39596538	C	T	intronic	KRT38	NA	NA	NA	intronic	ENSG00000171360	NA	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs2071609	0.45	0.45	0.44	0.423522	0.4394	0.5238	0.5663	0.3253	0.3354	0.44	0.53	0.49	0.34	0.4393	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.714129	NA	NA	0.401512	0.349977	NA	0.442	NA	2.719788
1380	15	78458485	78458485	T	C	intronic	IDH3A	NA	NA	NA	intronic	ENSG00000166411	NA	NA	NA	NA	NA	15q25.1	NA	NA	NA	NA	rs3816253	0.39	0.39	0.401	0.375	0.4344	0.1885	0.3991	0.4879	0.3364	0.43	0.19	0.43	0.53	0.4068	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.556107	NA	NA	0.439087	0.490209	NA	0.399	NA	2.719713
1380	12	3310482	3310482	C	G	intronic	TSPAN9	NA	NA	NA	intronic	ENSG00000011105	NA	NA	NA	NA	NA	12p13.32	NA	NA	NA	NA	rs740775	0.59	0.59	0.544	0.596845	0.6412	0.6776	0.5375	0.4773	0.6718	0.65	0.66	0.56	0.45	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.501886	NA	NA	0.639221	0.475434	NA	0.435	NA	2.719579
1380	17	5048207	5048207	A	G	intronic	USP6	NA	NA	NA	intronic	ENSG00000129204	NA	NA	NA	NA	NA	17p13.2	Score=1000;Name=V$AML1_01	NA	NA	NA	rs2304447	0.62	0.62	0.594	0.591054	0.7753	0.3958	0.7032	0.7247	0.3425	0.75	0.35	0.71	0.68	0.7044	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.157196	NA	NA	0.801512	0.734907	NA	0.029	NA	2.718788
1380	20	3176009	3176009	T	C	intronic	DDRGK1	NA	NA	NA	intronic	ENSG00000198171	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs2295552	0.41	0.41	0.351	0.433107	0.4414	0.4028	0.3761	0.4259	0.5061	0.43	0.37	0.39	0.43	0.4148	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.579188	NA	NA	0.425116	0.397867	NA	0.522	NA	2.718684
1380	7	30536874	30536874	G	A	intronic	GGCT	NA	NA	NA	intronic	ENSG00000006625	NA	NA	NA	NA	NA	7p14.3	NA	NA	NA	NA	rs38405	0.56	0.56	0.578	0.583666	0.3897	0.4266	0.5533	0.9493	0.4724	0.38	0.47	0.56	0.93	0.4825	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.015751	NA	NA	0.409123	0.855682	NA	0.551	NA	2.718677
1380	14	106382687	106382687	C	T	intergenic	ELK2AP,KIAA0125	dist=243543;dist=1151	NA	NA	exonic	ENSG00000211931	NA	unknown	UNKNOWN	NA	NA	14q32.33	NA	NA	NA	NA	rs2857339	0.39	0.39	0.364	0.350639	0.505	0.1984	0.402	0.3669	0.2904	0.51	0.22	0.45	0.36	0.4446	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.475093	NA	NA	0.498414	0.372617	NA	0.203	NA	2.7186527
1380	10	127843921	127843921	T	C	intronic	ADAM12	NA	NA	NA	intronic	ENSG00000148848	NA	NA	NA	NA	NA	10q26.2	NA	NA	NA	NA	rs1466361	0.53	0.53	0.526	0.538738	0.4294	0.7202	0.4568	0.466	0.6207	0.43	0.74	0.48	0.48	0.4714	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.755793	NA	NA	0.380581	0.434408	NA	0.529	NA	2.718619
1380	16	10770075	10770075	A	G	intronic	TEKT5	NA	NA	NA	intronic	ENSG00000153060	NA	NA	NA	NA	NA	16p13.13	NA	NA	NA	NA	rs2719711	0.61	0.61	0.596	0.66853	0.3618	0.8135	0.6124	0.8139	0.6779	0.38	0.82	0.54	0.79	0.52	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.399991	NA	NA	0.399651	0.758762	NA	0.725	NA	2.718549
1380	4	74014809	74014809	A	C	intronic	ANKRD17	NA	NA	NA	intronic	ENSG00000132466	NA	NA	NA	NA	NA	4q13.3	NA	NA	NA	NA	rs1534450	0.41	0.41	0.36	0.375399	0.4195	0.4792	0.5259	0.2065	0.3446	0.43	0.51	0.52	0.19	0.4327	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.408985	NA	NA	0.429338	0.232712	NA	0.399	NA	2.718462
1380	12	55250714	55250714	G	A	intronic	MUCL1	NA	NA	NA	intronic	ENSG00000172551	NA	NA	NA	NA	NA	12q13.2	NA	NA	NA	NA	rs10876639	0.45	0.45	0.401	0.459465	0.4056	0.7262	0.5562	0.1142	0.638	0.41	0.71	0.52	0.15	0.4652	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.81324	NA	NA	0.411628	0.142079	NA	0.384	NA	2.717572
1380	17	11583089	11583089	T	C	exonic	DNAH9	NA	synonymous SNV	DNAH9:NM_001372:exon18:c.T3369C:p.D1123D	exonic	ENSG00000007174	NA	synonymous SNV	ENSG00000007174:ENST00000262442:exon18:c.T3369C:p.D1123D,ENSG00000007174:ENST00000454412:exon18:c.T3369C:p.D1123D	NA	NA	17p12	NA	NA	NA	NA	rs8071438	0.96	0.96	0.946	0.947883	0.9891	0.9147	0.9654	0.9221	0.9622	0.99	0.92	0.96	0.93	0.9722	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.295226	NA	NA	0.988023	0.929868	NA	0.971	NA	2.7173436
1380	10	127843756	127843756	G	A	intronic	ADAM12	NA	NA	NA	intronic	ENSG00000148848	NA	NA	NA	NA	NA	10q26.2	NA	NA	NA	NA	rs1466360	0.53	0.53	0.523	0.544529	0.4304	0.7202	0.4568	0.4871	0.6207	0.43	0.74	0.48	0.5	0.4724	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.084373	NA	NA	0.380581	0.461416	NA	0.543	NA	2.716619
1380	14	21971729	21971729	C	G	intronic	METTL3	NA	NA	NA	intronic	ENSG00000165819	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs2242526	0.43	0.43	0.428	0.424521	0.4274	0.3214	0.4236	0.4932	0.4356	0.44	0.33	0.43	0.52	0.4231	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.126225	NA	NA	0.433372	0.452792	NA	0.471	NA	2.716128
1380	2	220033956	220033956	T	C	intronic	SLC23A3	NA	NA	NA	intronic	ENSG00000213901	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs6436121	0.44	0.44	0.415	0.413538	0.6541	0.2302	0.4179	0.2436	0.5818	0.67	0.26	0.47	0.27	NA	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.304157	NA	NA	0.630107	0.309971	NA	0.5	NA	2.715793
1380	6	101100783	101100783	T	C	intronic	ASCC3	NA	NA	NA	intronic	ENSG00000112249	NA	NA	NA	NA	NA	6q16.3	NA	NA	NA	NA	rs9399641	0.31	0.31	0.28	0.248602	0.4642	0.2153	0.4092	0.0635	0.1973	0.48	0.24	0.38	0.07	0.3685	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.544138	NA	NA	0.451512	0.147593	NA	0.312	NA	2.715788
1380	12	126994913	126994913	G	A	intergenic	LOC100128554,LOC387895	dist=37582;dist=220334	NA	NA	downstream	ENSG00000255853	NA	NA	NA	NA	NA	12q24.32	NA	NA	NA	NA	rs10847172	0.72	0.72	0.678	0.679113	0.7843	0.9573	0.8256	0.236	0.7791	0.79	0.96	0.82	0.25	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.991909	NA	NA	NA	NA	NA	0.478	NA	2.7157
1380	21	43829758	43829758	G	A	intronic	UBASH3A	NA	NA	NA	intronic	ENSG00000160185	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs11702374	0.42	0.42	0.383	0.403754	0.4165	0.2907	0.3991	0.5348	0.3333	0.43	0.31	0.42	0.52	0.4135	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.656039	NA	NA	0.454651	0.506582	NA	0.464	NA	2.715349
1380	2	197172816	197172816	G	A	intronic	HECW2	NA	NA	NA	intronic	ENSG00000138411	NA	NA	NA	NA	NA	2q32.3	NA	NA	Name=6	NA	rs2305567	0.77	0.77	0.748	0.749601	0.7634	0.9603	0.8012	0.5287	0.7802	0.76	0.95	0.76	0.57	0.767	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.180486	NA	NA	0.754302	0.540172	NA	0.667	NA	2.715298
1380	17	39596393	39596393	C	A	intronic	KRT38	NA	NA	NA	intronic	ENSG00000171360	NA	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs12601328	0.45	0.45	0.443	0.423522	0.4394	0.5238	0.5663	0.3253	0.3354	0.44	0.53	0.49	0.34	0.4439	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.419372	NA	NA	0.401512	0.350204	NA	0.442	NA	2.715188
1380	10	5066566	5066566	A	G	intergenic	AKR1C2,AKR1C3	dist=6341;dist=24392	NA	NA	intergenic	ENSG00000151632,ENSG00000251740	dist=6359;dist=23489	NA	NA	NA	NA	10p15.1	NA	NA	NA	NA	rs1937880	0.53	0.53	0.5	0.508786	0.6183	0.4206	0.6787	0.4312	0.4714	0.61	0.44	0.66	0.45	NA	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.649894	NA	NA	NA	NA	NA	0.5	NA	2.7150334
1381	17	5036849	5036849	T	C	intronic	USP6	NA	NA	NA	intronic	ENSG00000129204	NA	NA	NA	Score=497;Name=lod=140	NA	17p13.2	NA	NA	NA	NA	rs3867174	0.57	0.57	0.621	0.590855	0.7753	0.3948	0.6974	0.73	0.3395	0.69	0.36	0.67	0.57	0.7033	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.120218	NA	NA	0.806467	0.744439	NA	0.5	NA	2.714933
1381	11	44959213	44959213	C	T	intronic	TP53I11	NA	NA	NA	intronic	ENSG00000175274	NA	NA	NA	NA	NA	11p11.2	NA	NA	NA	NA	rs2279363	0.46	0.46	0.427	0.488019	0.4026	0.6607	0.4712	0.2943	0.6718	0.41	0.67	0.5	0.27	0.4725	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.234669	NA	NA	0.410328	0.315479	NA	0.457	NA	2.714572
1381	18	14475655	14475655	C	T	intergenic	CYP4F35P,CXADRP3	dist=133132;dist=2299	NA	NA	intergenic	ENSG00000266605,ENSG00000265766	dist=24773;dist=2299	NA	NA	NA	NA	18p11.21	NA	NA	NA	NA	rs34786265	0.33	0.33	0.305	0.275958	0.6193	0.128	0.389	0.0552	0.2935	0.64	0.11	0.39	0.06	NA	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.440259	NA	NA	NA	NA	NA	0.145	NA	2.7140334
1381	9	135073315	135073315	C	G	intronic	NTNG2	NA	NA	NA	intronic	ENSG00000196358	NA	NA	NA	NA	NA	9q34.13	NA	NA	NA	NA	rs11243664	0.4	0.4	0.406	0.398562	0.4414	0.502	0.3386	0.2806	0.4499	0.44	0.48	0.32	0.3	0.4099	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.640749	2.640749	NA	0.43493	0.27412	NA	0.297	NA	2.71377
1381	7	144706951	144706951	A	G	intergenic	TPK1,CNTNAP2	dist=173805;dist=1106502	NA	NA	upstream	ENSG00000214035	NA	NA	NA	NA	NA	7q35	NA	NA	NA	NA	rs7778641	0.72	0.72	0.721	0.689696	0.7863	0.8393	0.7003	0.5038	0.68	0.79	0.83	0.7	0.5	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.924744	NA	NA	NA	NA	NA	0.667	NA	2.7137
1381	19	17885325	17885325	A	C	intronic	FCHO1	NA	NA	NA	intronic	ENSG00000130475	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs2287857	0.58	0.58	0.558	0.576278	0.4026	0.7778	0.536	0.5772	0.5746	0.41	0.81	0.52	0.61	0.4766	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.699812	NA	NA	0.407188	0.553563	NA	0.565	NA	2.713612
1381	12	97147503	97147503	G	C	intergenic	CDK17,NEDD1	dist=353137;dist=153498	NA	NA	intronic	ENSG00000270032	NA	NA	NA	NA	NA	12q23.1	NA	NA	NA	NA	rs1420649	0.47	0.47	0.48	0.459665	0.3012	0.6736	0.3818	0.534	0.3569	0.31	0.69	0.39	0.54	0.3652	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.284305	NA	NA	0.286744	0.512937	ID=COSN164336;OCCURENCE=1(breast)	0.312	NA	2.7135227
1381	19	44501227	44501227	A	G	exonic	ZNF155	NA	synonymous SNV	ZNF155:NM_001260486:exon5:c.A1218G:p.G406G,ZNF155:NM_001260487:exon5:c.A1218G:p.G406G,ZNF155:NM_003445:exon5:c.A1218G:p.G406G,ZNF155:NM_198089:exon5:c.A1218G:p.G406G,ZNF155:NM_001260488:exon6:c.A1251G:p.G417G	exonic	ENSG00000204920	NA	synonymous SNV	ENSG00000204920:ENST00000270014:exon5:c.A1218G:p.G406G,ENSG00000204920:ENST00000590615:exon5:c.A1218G:p.G406G,ENSG00000204920:ENST00000407951:exon6:c.A1251G:p.G417G	NA	NA	19q13.31	NA	NA	NA	NA	rs388471	0.92	0.92	0.905	0.903554	0.992	1	0.9654	0.6619	0.9959	0.99	1	0.96	0.67	0.9681	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.98424	NA	NA	0.993256	0.707671	NA	0.906	NA	2.7133106
1381	21	44515685	44515685	T	C	intronic	U2AF1	NA	NA	NA	intronic	ENSG00000160201	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs2839634	0.37	0.37	0.383	0.375799	0.4046	0.0873	0.536	0.5522	0.2914	0.39	0.1	0.51	0.55	0.4218	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.141164	NA	NA	0.460698	0.533818	NA	0.493	NA	2.712902
1381	3	100277476	100277476	G	C	intronic	TMEM45A	NA	NA	NA	intronic	ENSG00000181458	NA	NA	NA	NA	NA	3q12.2	NA	NA	NA	NA	rs7645690	0.4	0.4	0.407	0.367212	0.4453	0.3175	0.3934	0.4145	0.2556	0.46	0.33	0.43	0.38	0.4108	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.622854	NA	NA	0.431047	0.415116	NA	0.507	NA	2.712853
1381	2	71163225	71163225	C	T	intronic	ATP6V1B1	NA	NA	NA	intronic	ENSG00000116039	NA	NA	NA	NA	NA	2p13.3	NA	NA	NA	NA	rs759219	0.4	0.4	0.408	0.377796	0.4453	0.3581	0.2954	0.4085	0.3456	0.46	0.36	0.31	0.43	0.4069	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.048099	NA	NA	0.435698	0.395597	NA	0.232	NA	2.712102
1381	17	39261611	39261611	G	A	upstream	KRTAP4-9	NA	NA	NA	UTR5	ENSG00000212722	ENST00000391415:c.-30G>A	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs11654665	NA	NA	0.468	0.658546	0.6849	0.3909	0.6427	0.9372	0.5419	NA	NA	NA	NA	0.6032	0.14	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.458636	NA	NA	NA	NA	NA	0.239	NA	2.7119
1381	19	17881552	17881552	C	T	intronic	FCHO1	NA	NA	NA	intronic	ENSG00000130475	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs3746197	0.57	0.57	0.557	0.566693	0.4016	0.7758	0.5303	0.5484	0.5716	0.41	0.8	0.52	0.59	0.4766	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.008796	NA	NA	0.41	0.539492	NA	0.558	NA	2.7118
1381	2	17898326	17898326	C	T	intronic	SMC6	NA	NA	NA	intronic	ENSG00000163029	NA	NA	NA	NA	NA	2p24.2	NA	NA	NA	NA	rs12469221	0.43	0.43	0.437	0.420327	0.4384	0.0794	0.3573	0.8691	0.1912	0.44	0.09	0.4	0.83	0.4052	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.350807	NA	NA	0.444716	0.761353	NA	0.486	NA	2.711684
1381	1	19557713	19557713	G	C	intronic	EMC1	NA	NA	NA	ncRNA_intronic	ENSG00000230424	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs2275403	0.67	0.67	0.685	0.667931	0.5159	0.7401	0.6571	0.8699	0.4847	0.51	0.76	0.63	0.86	0.5809	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.489494	NA	NA	0.525814	0.820926	NA	0.739	NA	2.7107193
1381	1	27660568	27660568	G	A	intronic	TMEM222	NA	NA	NA	intronic	ENSG00000186501	NA	NA	NA	NA	NA	1p36.11	NA	NA	NA	NA	rs35771571	0.35	0.35	0.354	0.359625	0.4592	0.2133	0.2795	0.4198	0.3834	0.46	0.21	0.29	0.4	0.3862	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.273642	NA	NA	0.444186	0.394916	NA	0.333	NA	2.710414
1381	9	35060955	35060955	T	C	intronic	VCP	NA	NA	NA	intronic	ENSG00000165280	NA	NA	NA	NA	NA	9p13.3	NA	NA	Name=7	NA	rs2258240	0.7	0.7	0.69	0.701877	0.7684	0.4563	0.8372	0.7368	0.7434	0.77	0.5	0.83	0.75	0.7461	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.387688	NA	NA	0.776047	0.733772	ID=COSN168535;OCCURENCE=1(large_intestine)	0.804	NA	2.709453
1381	11	107948858	107948858	T	A	intronic	CUL5	NA	NA	NA	intronic	ENSG00000166266	NA	NA	NA	NA	NA	11q22.3	NA	NA	NA	NA	rs10890807	0.35	0.35	0.298	0.369409	0.4334	0.4206	0.5461	0.0582	0.546	0.41	0.42	0.51	0.07	0.4522	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.117761	NA	NA	0.405132	0.105481	NA	0.167	NA	2.709268
1381	13	31725732	31725732	A	C	intronic	HSPH1	NA	NA	NA	intronic	ENSG00000120694	NA	NA	NA	NA	NA	13q12.3	NA	NA	NA	NA	rs4941772	0.27	0.27	0.27	0.223442	0.4642	0.0109	0.2723	0.236	0.1431	0.47	0.0017	0.3	0.25	0.3546	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.451824	NA	NA	0.472093	0.282115	NA	0.319	NA	2.709107
1381	19	17173487	17173487	A	G	intronic	HAUS8	NA	NA	NA	intronic	ENSG00000131351	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs3816550	0.43	0.43	0.385	0.471246	0.3996	0.4058	0.5187	0.4539	0.6022	0.39	0.42	0.48	0.47	0.466	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.170613	NA	NA	0.425349	0.444621	NA	0.486	NA	2.709051
1381	19	17885308	17885308	G	A	intronic	FCHO1	NA	NA	NA	intronic	ENSG00000130475	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs2287858	0.58	0.58	0.557	0.576278	0.4026	0.7778	0.536	0.5772	0.5746	0.41	0.81	0.52	0.61	0.4797	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.717521	NA	NA	0.408837	0.557195	NA	0.565	NA	2.708863
1381	19	54327440	54327440	G	A	UTR5	NLRP12	NM_144687:c.-12C>T,NM_001277129:c.-12C>T,NM_001277126:c.-12C>T	NA	NA	UTR5	ENSG00000142405	ENST00000354278:c.-12C>T,ENST00000351894:c.-12C>T,ENST00000535162:c.-12C>T,ENST00000324134:c.-12C>T,ENST00000391775:c.-12C>T,ENST00000391772:c.-12C>T,ENST00000345770:c.-12C>T,ENST00000391773:c.-12C>T	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs4539722	0.48	0.48	0.452	0.421126	0.5686	0.5456	0.5029	0.177	0.4131	0.57	0.59	0.51	0.18	0.5035	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.6872	NA	NA	0.552442	0.245347	NA	0.464	NA	2.7087914
1381	17	40705100	40705100	C	T	intronic	HSD17B1	NA	NA	NA	ncRNA_exonic	ENSG00000266962	NA	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs597255	0.52	0.52	0.521	0.573482	0.5239	0.4534	0.5144	0.6664	0.6646	0.53	0.45	0.47	0.64	0.5577	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.226705	NA	NA	0.543256	0.650704	NA	0.645	NA	2.7084773
1381	8	109462791	109462791	A	G	intronic	EMC2	NA	NA	NA	intronic	ENSG00000104412	NA	NA	NA	NA	NA	8q23.1	NA	NA	NA	NA	rs4540386	0.66	0.66	0.682	0.696286	0.6581	0.5526	0.5432	0.8457	0.7904	0.66	0.55	0.55	0.85	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.075932	NA	NA	0.633648	0.791185	NA	0.725	NA	2.708252
1381	11	4572042	4572042	G	C	intergenic	OR52M1,C11orf40	dist=4668;dist=20611	NA	NA	intergenic	ENSG00000197790,ENSG00000171987	dist=4668;dist=20611	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs7113602	0.66	0.66	0.624	0.623802	0.6252	0.7341	0.7406	0.5507	0.5245	0.65	0.71	0.71	0.56	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.97121	NA	NA	NA	NA	NA	0.761	NA	2.7081334
1381	19	17382505	17382505	A	T	intronic	BABAM1	NA	NA	NA	intronic	ENSG00000105393,ENSG00000130307,ENSG00000269307	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs10420922	0.45	0.45	0.465	0.463059	0.4215	0.3155	0.4222	0.7095	0.3538	0.41	0.3	0.38	0.73	0.4367	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.115404	NA	NA	0.433671	0.671429	NA	0.449	NA	2.708129
1381	8	27593650	27593650	T	C	UTR3	CCDC25	NM_018246:c.*83A>G	NA	NA	ncRNA_UTR3	ENSG00000147419	NA	NA	NA	NA	NA	8p21.1	NA	NA	NA	NA	rs10081527	0.8	0.8	0.846	0.84345	0.8907	0.7718	0.9092	0.8298	0.8405	0.85	0.73	0.87	0.73	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.698745	NA	NA	0.901258	0.825867	NA	0.797	NA	2.708042
1381	1	229795070	229795070	T	G	UTR3	URB2	NM_014777:c.*26T>G	NA	NA	UTR3	ENSG00000135763	ENST00000258243:c.*26T>G	NA	NA	NA	NA	1q42.13	NA	NA	NA	NA	rs1048306	0.63	0.63	0.629	0.602037	0.5457	0.8343	0.5778	0.5083	0.5644	0.53	0.87	0.6	0.53	0.5637	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.408413	NA	NA	0.51593	0.53586	NA	0.5	NA	2.7080034
1381	15	42377744	42377744	C	G	intronic	PLA2G4D	NA	NA	NA	intronic	ENSG00000159337	NA	NA	NA	NA	NA	15q15.1	NA	NA	Name=10	NA	rs605253	0.69	0.69	0.668	0.664337	0.7684	0.6062	0.7925	0.5703	0.6534	0.77	0.61	0.81	0.59	0.7437	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.328956	NA	NA	0.78053	0.618475	NA	0.667	NA	2.70737
1381	11	57156438	57156438	A	G	intronic	PRG2	NA	NA	NA	intronic	ENSG00000186652	NA	NA	NA	NA	NA	11q12.1	NA	NA	NA	NA	rs3741089	0.32	0.32	0.334	0.289936	0.4573	0.2341	0.2565	0.2481	0.2556	0.45	0.26	0.29	0.23	0.3774	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.807646	NA	NA	0.458217	0.287824	NA	0.312	NA	2.707083
1381	3	46016851	46016851	A	T	intronic	FYCO1	NA	NA	NA	intronic	ENSG00000163820	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs751552	0.43	0.43	0.359	0.386981	0.4314	0.6607	0.5648	0.0628	0.3712	0.43	0.63	0.55	0.08	0.4305	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.446544	1.446544	NA	0.431047	0.123468	ID=COSN166861;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.355	NA	2.707053
1381	6	38820599	38820599	T	G	intronic	DNAH8	NA	NA	NA	intronic	ENSG00000124721	NA	NA	NA	NA	NA	6p21.2	NA	NA	NA	NA	rs9380787	0.51	0.51	0.464	0.50599	0.3757	0.8343	0.5994	0.2632	0.5634	0.39	0.83	0.56	0.29	0.4905	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.651565	NA	NA	0.426977	0.283023	NA	0.572	NA	2.706823
1381	12	9021256	9021256	C	T	intronic	A2ML1	NA	NA	NA	intronic	ENSG00000166535	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs12816475	0.37	0.37	0.374	0.404553	0.4344	0.2153	0.3761	0.4879	0.4765	0.44	0.19	0.38	0.47	0.4127	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.393291	NA	NA	0.446894	0.439788	ID=COSN164141;OCCURENCE=1(breast)	0.507	NA	2.706006
1381	2	44145374	44145374	G	T	intronic	LRPPRC	NA	NA	NA	intronic	ENSG00000138095	NA	NA	NA	NA	NA	2p21	NA	NA	NA	NA	rs7568481	0.65	0.65	0.67	0.654553	0.4046	0.9603	0.5922	0.7572	0.502	0.39	0.95	0.53	0.8	0.4992	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.018973	2.018973	NA	0.390581	0.674308	NA	0.58	NA	2.705619
1381	6	31106409	31106409	A	G	intronic	PSORS1C1,PSORS1C2	NA	NA	NA	intronic	ENSG00000204538,ENSG00000204540	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs3132557	0.43	0.43	0.399	0.406949	0.4384	0.496	0.4971	0.2867	0.3814	0.45	0.49	0.49	0.3	0.4202	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.535825	NA	NA	0.436139	0.30894	NA	0.399	NA	2.705261
1381	17	4638010	4638010	T	G	intronic	CXCL16	NA	NA	NA	intronic	ENSG00000161921	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs3744700	0.72	0.72	0.713	0.746406	0.6392	0.8849	0.7695	0.5915	0.907	0.65	0.89	0.75	0.59	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.09574	NA	NA	0.655563	0.580925	NA	0.674	NA	2.705237
1382	2	17888457	17888457	G	A	intronic	SMC6	NA	NA	NA	intronic	ENSG00000163029	NA	NA	NA	NA	NA	2p24.2	NA	NA	NA	NA	rs6734462	0.43	0.43	0.442	0.420527	0.4384	0.0804	0.3573	0.8691	0.1912	0.44	0.09	0.4	0.83	0.413	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.726613	NA	NA	0.443953	0.760445	NA	0.486	NA	2.704647
1382	14	50732042	50732042	G	A	intronic	L2HGDH	NA	NA	NA	intronic	ENSG00000087299	NA	NA	NA	NA	NA	14q21.3	NA	NA	NA	NA	rs12432673	0.41	0.41	0.398	0.417133	0.4314	0.6359	0.3833	0.1891	0.5092	0.42	0.62	0.36	0.17	0.4377	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.716691	NA	NA	0.426628	0.227871	NA	0.246	NA	2.704272
1382	22	50720181	50720181	C	G	intronic	PLXNB2	NA	NA	NA	intronic	ENSG00000196576	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs28442189	0.36	0.36	0.381	0.372404	0.4423	0.2738	0.2911	0.32	0.5307	0.44	0.31	0.3	0.35	0.4246	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.103675	NA	NA	0.428959	0.332864	NA	0.297	NA	2.704141
1382	2	170428127	170428127	T	G	intronic	FASTKD1	NA	NA	NA	intronic	ENSG00000138399	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	rs4668146	0.37	0.37	0.335	0.34405	0.4294	0.4643	0.4755	0.118	0.3446	0.42	0.44	0.41	0.17	0.4798	0.44	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.032265	NA	NA	0.386683	0.160319	NA	0.297	NA	2.704117
1382	11	60700991	60700991	A	G	intronic	TMEM132A	NA	NA	NA	intronic	ENSG00000006118	NA	NA	NA	NA	NA	11q12.2	NA	NA	NA	NA	rs512233	0.41	0.41	0.42	0.41873	0.4225	0.3165	0.4452	0.4614	0.4438	0.42	0.32	0.45	0.46	0.4495	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.151505	NA	NA	0.424065	0.448952	NA	0.493	NA	2.703935
1382	11	47826090	47826090	A	C	intronic	NUP160	NA	NA	NA	intronic	ENSG00000030066	NA	NA	NA	NA	NA	11p11.2	NA	NA	NA	NA	rs11039402	0.32	0.32	0.313	0.344848	0.4304	0.4355	0.3213	0.084	0.5327	0.43	0.35	0.34	0.12	0.4102	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.502683	4.502683	NA	0.455561	0.15652	NA	0.297	NA	2.703839
1382	1	236381917	236381917	T	A	intronic	ERO1LB	NA	NA	NA	intronic	ENSG00000086619	NA	NA	NA	NA	NA	1q42.3	NA	NA	NA	NA	rs1614938	0.57	0.57	0.544	0.569289	0.4006	0.8839	0.5821	0.4803	0.5297	0.38	0.89	0.58	0.47	0.4953	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.002121	NA	NA	0.400304	0.482916	NA	0.536	NA	2.703796
1382	8	17927280	17927280	G	T	intronic	ASAH1	NA	NA	NA	intronic	ENSG00000104763	NA	NA	NA	NA	NA	8p22	NA	NA	NA	NA	rs2106037	0.34	0.34	0.295	0.339058	0.4463	0.3016	0.4337	0.1324	0.4796	0.44	0.29	0.46	0.16	0.4131	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.18655	NA	NA	0.436816	0.176431	NA	0.159	NA	2.703784
1382	1	55572867	55572867	G	A	intronic	USP24	NA	NA	NA	intronic	ENSG00000162402	NA	NA	NA	NA	NA	1p32.3	NA	NA	Name=14	NA	rs594226	0.7	0.7	0.666	0.691893	0.7704	0.9196	0.8473	0.2632	0.8456	0.76	0.9	0.82	0.3	0.758	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.334577	NA	NA	0.767922	0.367066	NA	0.667	NA	2.703678
1382	16	57713250	57713250	C	T	intronic	GPR97	NA	NA	NA	intronic	ENSG00000182885	NA	NA	NA	NA	NA	16q21	NA	NA	NA	NA	rs4238795	0.57	0.57	0.577	0.591254	0.4076	0.5437	0.5793	0.857	0.4785	0.39	0.57	0.6	0.84	0.4931	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.030375	NA	NA	0.39593	0.78162	NA	0.543	NA	2.70337
1382	7	82455895	82455895	A	G	intronic	PCLO	NA	NA	NA	intronic	ENSG00000186472	NA	NA	NA	NA	NA	7q21.11	NA	NA	NA	NA	rs2715150	0.42	0.42	0.4	0.402556	0.4324	0.6865	0.4164	0.0424	0.5562	0.45	0.7	0.41	0.07	0.4432	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.793535	3.793535	NA	0.421143	0.103942	NA	0.225	NA	2.703257
1382	5	170221185	170221185	A	G	intronic	GABRP	NA	NA	NA	intronic	ENSG00000094755	NA	NA	NA	NA	NA	5q35.1	NA	NA	NA	NA	rs6884917	0.51	0.51	0.549	0.554513	0.4235	0.4167	0.3963	0.8691	0.5184	0.43	0.43	0.4	0.83	0.4595	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.032178	NA	NA	0.413837	0.805719	NA	0.58	NA	2.703163
1382	4	184922669	184922669	G	A	intronic	STOX2	NA	NA	NA	intronic	ENSG00000173320	NA	NA	NA	NA	NA	4q35.1	NA	NA	NA	NA	rs3749534	0.36	0.36	0.332	0.350839	0.4374	0.4593	0.4049	0.0643	0.499	0.45	0.48	0.37	0.08	0.4155	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.050184	NA	NA	0.444814	0.122439	NA	0.275	NA	2.702286
1382	16	30017895	30017895	T	C	intronic	DOC2A	NA	NA	NA	intronic	ENSG00000149927	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs3814880	0.35	0.35	0.312	0.357827	0.4423	0.378	0.3213	0.1846	0.5102	0.44	0.36	0.35	0.18	0.4095	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.112864	NA	NA	0.446047	0.200956	NA	0.355	NA	2.702153
1382	3	42264393	42264393	A	G	intronic	TRAK1	NA	NA	NA	intronic	ENSG00000182606	NA	NA	NA	NA	NA	3p22.1	NA	NA	NA	NA	rs3733053	0.47	0.47	0.474	0.475439	0.4513	0.4534	0.3285	0.7118	0.3078	0.45	0.42	0.32	0.65	0.4369	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.263003	NA	NA	0.409736	0.611614	NA	0.486	NA	2.702064
1382	6	46856263	46856263	G	A	intronic	GPR116	NA	NA	NA	intronic	ENSG00000069122	NA	NA	NA	NA	NA	6p12.3	NA	NA	NA	NA	rs677439	0.36	0.36	0.32	0.302915	0.4612	0.5159	0.3112	0.059	0.2444	0.44	0.53	0.33	0.05	0.3937	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.041113	NA	NA	0.44314	0.110758	NA	0.377	NA	2.70196
1382	5	33458636	33458636	G	A	intronic	TARS	NA	NA	NA	intronic	ENSG00000113407	NA	NA	NA	NA	NA	5p13.3	NA	NA	NA	NA	rs3765145	0.56	0.56	0.576	0.606829	0.3986	0.7312	0.4914	0.702	0.6462	0.4	0.73	0.45	0.69	0.506	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.031012	NA	NA	0.393605	0.669088	NA	0.645	NA	2.701795
1382	1	203055101	203055101	A	G	UTR5	MYOG	NM_002479:c.-12T>C	NA	NA	UTR5	ENSG00000122180	ENST00000241651:c.-12T>C	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs4950877	0.53	0.53	0.503	0.520367	0.5427	0.5308	0.6196	0.5219	0.4141	0.53	0.53	0.57	0.52	0.5534	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.615453	1.615453	NA	0.535465	0.5463	NA	0.609	NA	2.7017684
1382	19	46627592	46627592	G	A	intronic	IGFL3	NA	NA	NA	ncRNA_intronic	ENSG00000267922	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs2287307	0.4	0.4	0.403	0.383387	0.5736	0.3145	0.3501	0.2829	0.4182	0.54	0.29	0.4	0.28	0.485	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.683073	NA	NA	0.573837	0.333943	NA	0.304	NA	2.7008963
1382	7	624221	624221	T	G	intronic	PRKAR1B	NA	NA	NA	intronic	ENSG00000188191	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs9330368	0.72	0.72	0.729	NA	NA	NA	NA	NA	NA	0.57	0.83	0.71	0.83	0.6857	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.189341	NA	NA	0.613594	0.794598	NA	0.703	NA	2.700706
1382	15	101110356	101110356	T	C	intronic	LINS	NA	NA	NA	intronic	ENSG00000140471	NA	NA	NA	NA	NA	15q26.3	NA	NA	NA	NA	rs2411838	0.33	0.33	0.329	0.311502	0.4513	0.246	0.2493	0.2375	0.3793	0.46	0.25	0.29	0.25	0.3846	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.229039	NA	NA	0.463403	0.273394	NA	0.377	NA	2.700697
1382	16	17221755	17221755	T	G	intronic	XYLT1	NA	NA	NA	intronic	ENSG00000103489	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs3812961	0.26	0.26	0.228	0.211462	0.4612	0.1052	0.2522	0.0749	0.2198	0.47	0.11	0.31	0.07	0.3641	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.387247	NA	NA	0.47407	0.150432	ID=COSN165126;OCCURENCE=1(breast)	0.297	NA	2.70063
1382	5	73091126	73091126	T	A	intronic	ARHGEF28	NA	NA	NA	intronic	ENSG00000214944	NA	NA	NA	NA	NA	5q13.2	NA	NA	NA	NA	rs2973549	0.36	0.36	0.292	0.35024	0.4622	0.2798	0.3631	0.2912	0.3783	0.47	0.27	0.36	0.32	0.4308	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.34973	NA	NA	0.406703	0.255402	ID=COSN167489;OCCURENCE=1(large_intestine)	0.254	NA	2.700297
1382	1	236381897	236381897	T	A	intronic	ERO1LB	NA	NA	NA	intronic	ENSG00000086619	NA	NA	NA	NA	NA	1q42.3	NA	NA	NA	NA	rs1615601	0.57	0.57	0.533	0.569289	0.4006	0.8839	0.5821	0.4803	0.5297	0.38	0.89	0.58	0.47	0.4983	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.788764	NA	NA	0.40154	0.482727	NA	0.536	NA	2.69956
1382	11	47801101	47801101	A	G	intronic	NUP160	NA	NA	NA	intronic	ENSG00000030066	NA	NA	NA	NA	NA	11p11.2	NA	NA	NA	NA	rs7114813	0.32	0.32	0.299	0.344449	0.4304	0.4355	0.317	0.0847	0.5327	0.43	0.35	0.34	0.12	0.4129	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.021848	NA	NA	0.457516	0.158467	NA	0.297	NA	2.699184
1382	2	160304741	160304741	A	T	intronic	BAZ2B	NA	NA	NA	intronic	ENSG00000123636	NA	NA	NA	NA	NA	2q24.2	NA	NA	NA	NA	rs12470533	0.38	0.38	0.391	0.343051	0.4652	0.3938	0.2997	0.3215	0.2249	0.44	0.39	0.34	0.32	0.3811	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.286071	1.286071	NA	0.455002	0.33763	NA	0.413	NA	2.698698
1382	3	42264422	42264422	T	C	intronic	TRAK1	NA	NA	NA	intronic	ENSG00000182606	NA	NA	NA	NA	NA	3p22.1	NA	NA	NA	NA	rs3733054	0.48	0.48	0.48	0.475839	0.4523	0.4544	0.3285	0.7118	0.3078	0.46	0.44	0.33	0.66	0.438	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.436106	NA	NA	0.411236	0.625867	NA	0.507	NA	2.698464
1382	6	42931224	42931224	G	A	intronic	GNMT	NA	NA	NA	intronic	ENSG00000124713	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs4987173	0.34	0.34	0.346	0.341454	0.4622	0.1012	0.353	0.407	0.3681	0.46	0.12	0.36	0.39	0.3929	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.022501	NA	NA	0.447093	0.408761	NA	0.355	NA	2.697807
1382	1	204978643	204978643	C	A	intronic	NFASC	NA	NA	NA	intronic	ENSG00000163531	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs1530744	0.27	0.27	0.246	0.228435	0.4682	0.1984	0.2666	0.0174	0.271	0.47	0.18	0.35	0.03	0.3582	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.387517	NA	NA	0.476163	0.094417	NA	0.246	NA	2.697437
1382	2	202245955	202245955	A	G	intronic	TRAK2	NA	NA	NA	intronic	ENSG00000115993	NA	NA	NA	NA	NA	2q33.1	NA	NA	NA	NA	rs72937131	NA	NA	NA	0.520567	0.661	0.4921	0.5461	0.3381	0.6339	NA	NA	NA	NA	0.6426	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.055064	NA	NA	NA	NA	NA	NA	NA	2.6964
1382	1	236385360	236385360	C	T	intronic	ERO1LB	NA	NA	NA	intronic	ENSG00000086619	NA	NA	NA	NA	NA	1q42.3	NA	NA	NA	NA	rs2477587	0.57	0.57	0.551	0.569489	0.4006	0.8849	0.5821	0.4803	0.5297	0.38	0.89	0.58	0.47	0.5003	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.015143	2.015143	NA	0.403094	0.488409	NA	0.536	NA	2.696006
1382	10	99225738	99225738	T	A	intronic	MMS19	NA	NA	NA	intronic	ENSG00000155229	NA	NA	NA	NA	NA	10q24.1	NA	NA	NA	NA	rs2236575	0.42	0.42	0.424	0.384185	0.4543	0.375	0.415	0.3631	0.3282	0.46	0.38	0.45	0.37	0.4184	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.538776	NA	NA	0.43186	0.368588	ID=COSN163725;OCCURENCE=1(breast)	0.507	NA	2.69544
1383	3	67660049	67660049	A	G	intronic	SUCLG2	NA	NA	NA	intronic	ENSG00000172340	NA	NA	NA	NA	NA	3p14.1	NA	NA	NA	NA	rs2290175	0.43	0.43	0.448	0.447684	0.4274	0.4385	0.2608	0.6793	0.2975	0.42	0.37	0.29	0.63	0.4234	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.664775	1.664775	NA	0.454757	0.640984	NA	0.522	NA	2.694443
1383	3	67660040	67660040	G	A	intronic	SUCLG2	NA	NA	NA	intronic	ENSG00000172340	NA	NA	NA	NA	NA	3p14.1	NA	NA	NA	NA	rs2290174	0.43	0.43	0.451	0.447684	0.4274	0.4385	0.2608	0.6793	0.2975	0.42	0.37	0.29	0.63	0.423	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.281724	NA	NA	0.455257	0.64173	NA	0.522	NA	2.694343
1383	10	127483573	127483573	G	A	intronic	UROS	NA	NA	NA	intronic	ENSG00000188690	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs3740179	0.39	0.39	0.396	0.401158	0.4423	0.3115	0.3372	0.438	0.4468	0.44	0.32	0.36	0.41	0.411	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.084119	NA	NA	0.452674	0.427372	ID=COSN163808;OCCURENCE=1(NS)	0.384	NA	2.694026
1383	10	12288302	12288302	A	G	intronic	CDC123	NA	NA	NA	ncRNA_exonic	ENSG00000228302	NA	NA	NA	NA	NA	10p13	NA	NA	NA	NA	rs36042706	0.45	0.45	0.432	0.429313	0.5517	0.3264	0.5245	0.3086	0.5051	0.55	0.37	0.57	0.32	0.5201	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.28918	NA	NA	0.567791	0.342261	NA	0.486	NA	2.6937423
1383	12	81647065	81647065	G	A	intronic	ACSS3	NA	NA	NA	intronic	ENSG00000111058	NA	NA	NA	NA	NA	12q21.31	NA	NA	NA	NA	rs2895868	0.24	0.24	0.211	0.221645	0.4523	0.0298	0.3256	0.093	0.2822	0.43	0.03	0.34	0.11	0.3749	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.302881	2.302881	NA	0.47907	0.174989	NA	0.312	NA	2.69373
1383	12	117696164	117696164	G	A	intronic	NOS1	NA	NA	NA	intronic	ENSG00000089250	NA	NA	NA	NA	NA	12q24.22	NA	NA	NA	NA	rs1093329	0.56	0.56	0.558	0.560903	0.4304	0.6409	0.6196	0.6452	0.4571	0.44	0.61	0.59	0.66	0.4718	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.693008	NA	NA	0.404335	0.584974	NA	0.572	NA	2.693465
1383	10	127484653	127484653	G	A	intronic	UROS	NA	NA	NA	intronic	ENSG00000188690	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs2281954	0.38	0.38	0.417	0.395966	0.4443	0.2857	0.3415	0.4387	0.4407	0.44	0.29	0.36	0.41	0.4095	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.042336	NA	NA	0.453256	0.42601	ID=COSN163809;OCCURENCE=1(NS)	0.377	NA	2.692944
1383	6	119509785	119509785	C	G	intronic	MAN1A1	NA	NA	NA	intronic	ENSG00000111885	NA	NA	NA	NA	NA	6q22.31	NA	NA	NA	NA	rs2142887	0.28	0.28	0.233	0.241613	0.4771	0.2034	0.2579	0.0393	0.3006	0.48	0.17	0.31	0.05	0.3741	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.574559	NA	NA	0.45593	0.111439	NA	0.275	NA	2.69287
1383	6	25689487	25689487	G	C	intronic	SCGN	NA	NA	NA	intronic	ENSG00000079689	NA	NA	NA	NA	NA	6p22.2	NA	NA	NA	NA	rs2294346	0.48	0.48	0.454	0.470248	0.4433	0.7024	0.5173	0.2799	0.4826	0.44	0.72	0.49	0.26	0.453	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.170828	NA	NA	0.41093	0.313436	NA	0.377	NA	2.69277
1383	6	70778379	70778379	C	T	intronic	COL19A1	NA	NA	NA	intronic	ENSG00000082293	NA	NA	NA	NA	NA	6q13	NA	NA	NA	NA	rs2224514	0.41	0.41	0.035	0.521366	0.6044	0.2708	0.3775	0.7882	0.4356	0.49	0.2	0.33	0.57	0.5437	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.119732	NA	NA	0.159651	0.32433	NA	NA	NA	2.692249
1383	19	11224181	11224181	C	T	intronic	LDLR	NA	NA	NA	intronic	ENSG00000130164	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs1003723	0.28	0.28	0.219	0.276757	0.4583	0.1825	0.4697	0.0318	0.3814	0.46	0.15	0.45	0.04	0.3858	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.521706	NA	NA	0.463837	0.096005	NA	0.304	NA	2.692063
1383	1	68905358	68905358	G	C	intronic	RPE65	NA	NA	NA	intronic	ENSG00000116745	NA	NA	NA	NA	NA	1p31.2	NA	NA	NA	NA	rs1925955	0.66	0.66	0.651	0.69349	0.3917	0.8641	0.6715	0.857	0.6227	0.4	0.88	0.64	0.8	0.5272	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.144461	NA	NA	0.389535	0.771448	NA	0.681	NA	2.691565
1383	10	1779349	1779349	G	A	UTR5	ADARB2	NM_018702:c.-5C>T	NA	NA	UTR5	ENSG00000185736	ENST00000381312:c.-5C>T	NA	NA	NA	NA	10p15.3	NA	NA	NA	NA	rs3750684	0.42	0.42	0.406	0.445887	0.5765	0.1647	0.464	0.4811	0.5409	0.55	0.17	0.47	0.46	0.5033	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.83435	1.83435	NA	0.562442	0.510667	NA	0.413	NA	2.6910914
1383	1	38444749	38444749	T	C	intronic	SF3A3	NA	NA	NA	intronic	ENSG00000183431	NA	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	rs7555461	0.49	0.49	0.465	0.499401	0.4215	0.6825	0.5072	0.3964	0.5245	0.41	0.65	0.5	0.41	0.462	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.735433	1.735433	NA	0.42593	0.399591	NA	0.355	NA	2.69057
1383	3	100295733	100295733	A	G	intronic	TMEM45A	NA	NA	NA	intronic	ENSG00000181458	NA	NA	NA	NA	NA	3q12.2	NA	NA	NA	NA	rs7427360	0.5	0.5	0.53	0.475839	0.4423	0.3323	0.4251	0.8026	0.2526	0.46	0.34	0.44	0.81	0.4355	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.41527	2.41527	NA	0.431744	0.747617	NA	0.659	NA	2.690456
1383	6	70778378	70778378	G	C	intronic	COL19A1	NA	NA	NA	intronic	ENSG00000082293	NA	NA	NA	NA	NA	6q13	NA	NA	NA	NA	rs2224513	0.41	0.41	0.038	0.52516	0.6064	0.2708	0.3775	0.7988	0.4387	0.5	0.2	0.33	0.57	0.5437	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.047161	NA	NA	0.159535	0.301407	NA	NA	NA	2.690365
1383	6	160868701	160868701	G	A	intronic	SLC22A3	NA	NA	NA	intronic	ENSG00000146477	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs2457574	0.45	0.45	0.462	0.469848	0.4354	0.5367	0.3112	0.4138	0.6247	0.43	0.53	0.36	0.43	0.4503	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.298524	NA	NA	0.424186	0.385837	NA	0.399	NA	2.690114
1383	19	41077891	41077891	C	T	intronic	SPTBN4	NA	NA	NA	intronic	ENSG00000160460	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs8101070	0.33	0.33	0.352	0.30651	0.4324	0.0615	0.2666	0.4244	0.2986	0.45	0.06	0.31	0.48	0.399	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.644645	NA	NA	0.478721	0.440536	NA	0.275	NA	2.689879
1383	20	56886062	56886062	A	G	intronic	RAB22A	NA	NA	NA	intronic	ENSG00000124209	NA	NA	NA	NA	NA	20q13.32	NA	NA	NA	NA	rs542165	0.48	0.48	0.489	0.55651	0.4095	0.4583	0.4769	0.7027	0.6677	0.41	0.4	0.49	0.68	0.4866	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.600709	1.600709	NA	0.41407	0.677031	NA	0.543	NA	2.68983
1383	17	28386526	28386526	A	G	intronic	EFCAB5	NA	NA	NA	ncRNA_exonic	ENSG00000265289	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs4075623	0.55	0.55	0.575	0.572085	0.5656	0.2897	0.4669	0.9387	0.4489	0.55	0.29	0.48	0.92	0.5331	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.144835	NA	NA	0.544823	0.87152	NA	0.471	NA	2.6898103
1383	2	212543924	212543924	A	G	intronic	ERBB4	NA	NA	NA	intronic	ENSG00000178568	NA	NA	NA	NA	NA	2q34	NA	NA	NA	NA	rs4673628	0.34	0.34	0.349	0.344249	0.4553	0.0089	0.3703	0.5166	0.3241	0.44	0.01	0.38	0.56	0.397	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.88517	NA	NA	0.457907	0.503858	NA	0.435	NA	2.689793
1383	12	99166805	99166805	G	T	intronic	ANKS1B	NA	NA	NA	intronic	ENSG00000185046	NA	NA	NA	NA	NA	12q23.1	NA	NA	NA	NA	rs2287574	0.38	0.38	0.389	0.359824	0.4602	0.3333	0.3473	0.3351	0.3262	0.46	0.32	0.37	0.34	0.4012	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.092433	NA	NA	0.449103	0.342021	NA	0.413	NA	2.689497
1383	1	2332391	2332391	C	T	intronic	RER1	NA	NA	NA	intronic	ENSG00000157916	NA	NA	NA	NA	NA	1p36.32	NA	NA	NA	NA	rs12037485	0.35	0.35	0.325	0.340256	0.4483	0.255	0.4539	0.2678	0.3344	0.46	0.21	0.45	0.26	0.4124	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.945625	NA	NA	0.449866	0.273645	NA	0.391	NA	2.689434
1383	5	24509947	24509947	C	A	intronic	CDH10	NA	NA	NA	intronic	ENSG00000040731	NA	NA	NA	NA	NA	5p14.2	NA	NA	NA	NA	rs3797171	0.36	0.36	0.324	0.351837	0.4165	0.2956	0.5346	0.2141	0.3998	0.42	0.29	0.5	0.24	0.4403	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.178741	NA	NA	0.453826	0.253633	NA	0.377	NA	2.689374
1383	5	7757715	7757715	C	T	intronic	ADCY2	NA	NA	NA	intronic	ENSG00000078295	NA	NA	NA	NA	NA	5p15.31	NA	NA	NA	NA	rs4479814	0.47	0.47	0.445	0.486621	0.4324	0.3363	0.5922	0.7012	0.3323	0.42	0.31	0.53	0.7	0.4486	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.961483	NA	NA	0.429651	0.679528	NA	0.37	NA	2.689349
1383	17	64173170	64173170	A	G	intronic	CEP112	NA	NA	NA	intronic	ENSG00000154240	NA	NA	NA	NA	NA	17q24.1	NA	NA	NA	NA	rs2159557	0.31	0.31	0.312	0.247804	0.4781	0.0704	0.255	0.2844	0.1391	0.49	0.07	0.29	0.33	0.3762	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.873294	NA	NA	0.45675	0.322161	NA	0.283	NA	2.68895
1383	7	142198080	142198080	A	G	intergenic	LOC730441,MTRNR2L6	dist=226012;dist=176051	NA	NA	upstream	ENSG00000241657	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs17276	0.5	0.5	0.487	0.529952	0.4195	0.6369	0.4092	0.5537	0.5869	0.41	0.65	0.39	0.54	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.871485	NA	NA	0.392206	0.528902	NA	0.355	NA	2.688294
1383	12	77424135	77424135	C	T	intronic	E2F7	NA	NA	NA	intronic	ENSG00000165891	NA	NA	NA	NA	NA	12q21.2	NA	NA	NA	NA	rs10862960	0.34	0.34	0.294	0.313898	0.4453	0.2897	0.4222	0.1218	0.3865	0.44	0.32	0.42	0.13	0.421	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.568821	NA	NA	0.44544	0.180119	NA	0.304	NA	2.68826
1383	15	25299309	25299309	C	T	upstream	SNORD116-2	NA	NA	NA	ncRNA_intronic	ENSG00000224078	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs2554432	0.46	0.46	0.403	0.449681	0.4901	0.5784	0.4971	0.1808	0.6053	0.5	0.59	0.49	0.22	0.5031	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.255214	NA	NA	0.485434	0.214612	NA	0.406	NA	2.6880326
1383	3	10387059	10387059	C	A	intronic	ATP2B2	NA	NA	NA	intronic	ENSG00000157087	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs241509	0.41	0.41	0.36	0.406749	0.4404	0.497	0.5519	0.1104	0.5767	0.43	0.55	0.52	0.12	0.4444	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.313645	NA	NA	0.427209	0.143441	NA	0.457	NA	2.687991
1383	15	41509288	41509288	T	A	intronic	EXD1	NA	NA	NA	intronic	ENSG00000178997	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs7173086	0.48	0.48	0.503	0.52516	0.4394	0.2877	0.3804	0.823	0.5583	0.41	0.29	0.41	0.86	0.4443	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.726159	NA	NA	0.428372	0.761916	NA	0.551	NA	2.687928
1383	6	129622055	129622055	A	G	intronic	LAMA2	NA	NA	NA	intronic	ENSG00000196569	NA	NA	NA	NA	NA	6q22.33	NA	NA	NA	NA	rs902373	0.32	0.32	0.295	0.303714	0.4602	0.2976	0.3386	0.0953	0.4059	0.44	0.28	0.38	0.13	0.3995	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.094272	NA	NA	0.452442	0.161371	NA	0.406	NA	2.687858
1383	1	32155929	32155929	G	A	intronic	COL16A1	NA	NA	NA	intronic	ENSG00000084636	NA	NA	NA	NA	NA	1p35.2	NA	NA	NA	NA	rs2297681	0.34	0.34	0.341	0.304313	0.4791	0.1984	0.268	0.3313	0.2229	0.48	0.15	0.33	0.33	0.3775	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.389934	NA	NA	0.455708	0.3289	ID=COSN163032;OCCURENCE=1(NS)	0.348	NA	2.687692
1383	19	14065488	14065488	A	G	intronic	DCAF15	NA	NA	NA	intronic	ENSG00000132017	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs1056143	0.39	0.39	0.383	0.408147	0.4423	0.3591	0.317	0.4652	0.411	0.44	0.34	0.36	0.41	0.4192	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.383845	NA	NA	0.450814	0.444621	NA	0.449	NA	2.687686
1383	12	62104219	62104219	A	C	intronic	FAM19A2	NA	NA	NA	intronic	ENSG00000198673	NA	NA	NA	NA	NA	12q14.1	NA	NA	NA	NA	rs7399207	0.41	0.41	0.398	0.41254	0.4503	0.4087	0.4308	0.413	0.364	0.46	0.36	0.42	0.39	0.4237	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.998053	NA	NA	0.438372	0.394235	NA	0.435	NA	2.687628
1383	1	175087677	175087677	G	A	intronic	TNN	NA	NA	NA	intronic	ENSG00000120332	NA	NA	NA	NA	NA	1q25.1	NA	NA	NA	NA	rs6656284	0.44	0.44	0.477	0.475839	0.4513	0.0833	0.3818	0.9092	0.3865	0.44	0.09	0.38	0.88	0.4225	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.578098	1.578098	NA	0.438837	0.824171	NA	0.652	NA	2.687363
1383	6	54159866	54159866	C	T	intergenic	MLIP,TINAG	dist=28788;dist=13337	NA	NA	intergenic	ENSG00000146147,ENSG00000137251	dist=28788;dist=12898	NA	NA	NA	NA	6p12.1	NA	NA	NA	NA	rs7775058	0.43	0.43	0.399	0.408347	0.6461	0.2937	0.4409	0.2057	0.5327	0.65	0.31	0.46	0.21	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.652761	NA	NA	NA	NA	NA	0.384	NA	2.6872334
1383	20	24645939	24645939	G	A	intronic	SYNDIG1	NA	NA	NA	intronic	ENSG00000101463	NA	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	rs2892217	0.65	0.65	0.69	0.665935	0.4085	0.8671	0.3919	0.9758	0.499	0.41	0.85	0.38	0.98	0.4889	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.987017	NA	NA	0.416047	0.871312	NA	0.768	NA	2.686553
1383	14	74193427	74193427	A	G	intronic	ELMSAN1	NA	NA	NA	intronic	ENSG00000156030	NA	NA	NA	NA	NA	14q24.3	NA	NA	Name=23	NA	rs887508	0.86	0.86	0.873	0.860024	0.7575	0.9187	0.8242	0.972	0.7791	0.74	0.95	0.83	0.97	0.7915	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.141441	NA	NA	0.764884	0.938947	NA	0.768	NA	2.686116
1383	2	44173422	44173422	T	G	intronic	LRPPRC	NA	NA	NA	intronic	ENSG00000138095	NA	NA	NA	NA	NA	2p21	NA	NA	NA	NA	rs7594526	0.62	0.62	0.615	0.635583	0.4135	0.9573	0.5893	0.6543	0.5399	0.4	0.95	0.52	0.65	0.5014	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.796184	1.796184	NA	0.399069	0.620291	NA	0.551	NA	2.686031
1383	3	195347127	195347127	G	A	intergenic	APOD,SDHAP2	dist=36051;dist=37783	NA	NA	downstream	ENSG00000224769	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs3988246	0.84	0.84	0.866	0.827077	0.8141	0.9544	0.7046	0.9168	0.6748	0.78	0.96	0.71	0.88	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.8428	NA	NA	NA	NA	NA	0.246	NA	2.6859
1383	15	82530630	82530630	A	G	intronic	EFTUD1	NA	NA	NA	intronic	ENSG00000140598	NA	NA	NA	NA	NA	15q25.2	NA	NA	NA	NA	rs1972460	0.35	0.35	0.36	0.353035	0.4573	0.1706	0.3343	0.3306	0.4775	0.46	0.18	0.36	0.35	0.4146	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.907739	NA	NA	0.442406	0.358465	NA	0.464	NA	2.685694
1383	17	48477257	48477257	G	A	intergenic	LRRC59,ACSF2	dist=2343;dist=26262	NA	NA	intergenic	ENSG00000253102,ENSG00000167107	dist=2008;dist=26262	NA	NA	NA	NA	17q21.33	NA	NA	NA	NA	rs12450906	0.49	0.49	0.469	0.483227	0.6481	0.2113	0.5908	0.4917	0.5061	0.65	0.21	0.59	0.5	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.619462	NA	NA	NA	NA	NA	0.5	NA	2.6852334
1384	12	46601056	46601056	C	T	intronic	SLC38A1	NA	NA	NA	intronic	ENSG00000111371	NA	NA	NA	NA	NA	12q13.11	NA	NA	NA	NA	rs2289768	0.5	0.5	0.513	0.49401	0.4334	0.3929	0.5231	0.677	0.3926	0.43	0.43	0.52	0.68	0.4535	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.431046	NA	NA	0.428694	0.632918	NA	0.623	NA	2.684406
1384	17	80706928	80706928	G	A	intronic	FN3K	NA	NA	NA	intronic	ENSG00000167363	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs2243416	0.66	0.66	0.648	0.687899	0.6342	0.6865	0.696	0.6846	0.7434	0.63	0.67	0.67	0.68	0.6819	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.039671	NA	NA	NA	NA	NA	0.623	NA	2.6839
1384	11	19970579	19970579	C	T	exonic	NAV2	NA	synonymous SNV	NAV2:NM_001111018:exon10:c.C2406T:p.D802D,NAV2:NM_145117:exon10:c.C2598T:p.D866D,NAV2:NM_182964:exon10:c.C2598T:p.D866D,NAV2:NM_001244963:exon11:c.C2667T:p.D889D	exonic	ENSG00000166833	NA	synonymous SNV	ENSG00000166833:ENST00000349880:exon10:c.C2598T:p.D866D,ENSG00000166833:ENST00000360655:exon10:c.C2406T:p.D802D,ENSG00000166833:ENST00000396085:exon10:c.C2598T:p.D866D,ENSG00000166833:ENST00000396087:exon11:c.C2667T:p.D889D,ENSG00000166833:ENST00000527559:exon12:c.C2454T:p.D818D,ENSG00000166833:ENST00000540292:exon12:c.C2460T:p.D820D	NA	NA	11p15.1	NA	NA	NA	NA	rs2707084	0.95	0.95	0.943	0.943091	0.999	1	0.9813	0.7958	0.999	1	1	0.99	0.8	0.9846	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.209044	NA	NA	0.999185	0.843793	NA	0.935	NA	2.6838816
1384	22	30124614	30124614	A	T	intronic	CABP7	NA	NA	NA	intronic	ENSG00000100314	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs140096	0.48	0.48	0.499	0.405751	0.4652	0.5823	0.3112	0.4561	0.1616	0.47	0.59	0.35	0.47	0.3991	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.153984	NA	NA	0.451977	0.44099	NA	0.428	NA	2.683723
1384	4	73793490	73793490	T	C	intergenic	ADAMTS3,COX18	dist=358974;dist=126926	NA	NA	intergenic	ENSG00000270665,ENSG00000252955	dist=119581;dist=37405	NA	NA	NA	NA	4q13.3	NA	NA	NA	NA	rs4566626	0.66	0.66	0.656	0.668331	0.6501	0.756	0.4395	0.6884	0.7321	0.67	0.74	0.51	0.69	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.430588	NA	NA	NA	NA	NA	0.572	NA	2.6832334
1384	9	316998	316998	C	T	intronic	DOCK8	NA	NA	NA	intronic	ENSG00000107099	NA	NA	NA	NA	NA	9p24.3	NA	NA	NA	NA	rs2296824	0.44	0.44	0.444	0.433307	0.4274	0.1369	0.4899	0.7231	0.3129	0.45	0.14	0.51	0.71	0.427	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.717592	NA	NA	0.462442	0.678393	NA	0.587	NA	2.683158
1384	14	63269317	63269317	T	C	intronic	KCNH5	NA	NA	NA	intronic	ENSG00000140015	NA	NA	NA	NA	NA	14q23.2	NA	NA	NA	NA	rs12588427	0.47	0.47	0.441	0.486621	0.4374	0.6875	0.5303	0.2557	0.6115	0.45	0.68	0.46	0.27	0.4656	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.502915	3.502915	NA	0.41407	0.29301	NA	0.29	NA	2.68293
1384	9	97873957	97873957	A	G	intronic	FANCC	NA	NA	NA	intronic	ENSG00000158169	NA	NA	NA	NA	NA	9q22.32	NA	NA	NA	NA	rs4647534	0.54	0.54	0.527	0.541334	0.4473	0.6339	0.5086	0.6044	0.4806	0.45	0.63	0.48	0.61	0.4738	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.375894	NA	NA	0.396279	0.595552	NA	0.507	NA	2.682621
1384	9	132377728	132377728	C	T	intronic	C9orf50	NA	NA	NA	intronic	ENSG00000148335,ENSG00000179058	NA	NA	NA	NA	NA	9q34.11	NA	NA	NA	NA	rs918166	0.51	0.51	0.55	0.55651	0.4503	0.498	0.5202	0.7118	0.5419	0.43	0.5	0.51	0.67	0.4771	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.416114	NA	NA	0.39	0.667953	NA	0.638	NA	2.6826
1384	16	29993108	29993108	C	G	intronic	TAOK2	NA	NA	NA	intronic	ENSG00000149930	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs11642046	0.4	0.4	0.385	0.41893	0.4423	0.374	0.3429	0.407	0.5112	0.44	0.36	0.36	0.39	0.4291	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.76205	NA	NA	0.446047	0.415339	NA	0.406	NA	2.682553
1384	11	71551364	71551364	G	A	intergenic	DEFB108B,LOC100133315	dist=2756;dist=25191	NA	NA	intergenic	ENSG00000184276,ENSG00000252902	dist=2756;dist=4878	NA	NA	NA	NA	11q13.4	NA	NA	NA	NA	rs12420318	0.51	0.51	0.463	0.501198	0.6511	0.4504	0.4337	0.348	0.6544	0.65	0.45	0.48	0.39	NA	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.491172	NA	NA	NA	NA	NA	0.5	NA	2.6822334
1384	1	6145365	6145365	A	G	intronic	KCNAB2	NA	NA	NA	intronic	ENSG00000069424	NA	NA	NA	NA	NA	1p36.31	NA	NA	NA	NA	rs2294936	0.72	0.72	0.681	0.686502	0.6551	0.7798	0.6571	0.7716	0.5286	0.65	0.77	0.7	0.76	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.642501	NA	NA	0.662791	0.767341	NA	0.688	NA	2.682109
1384	7	94038934	94038934	C	T	intronic	COL1A2	NA	NA	NA	intronic	ENSG00000164692	NA	NA	NA	NA	NA	7q21.3	NA	Name=Pol2	NA	NA	rs42518	0.86	0.86	0.867	0.828075	0.7724	0.9038	0.8401	0.9221	0.6718	0.78	0.94	0.82	0.91	0.7815	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.258363	NA	NA	0.764651	0.89832	NA	0.833	NA	2.681449
1384	14	106232168	106232168	T	G	intergenic	ELK2AP,KIAA0125	dist=93024;dist=151670	NA	NA	intergenic	ENSG00000211896,ENSG00000211897	dist=22760;dist=3271	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs7150765	0.38	0.38	0.35	0.384385	0.6521	0.0863	0.4366	0.3457	0.4315	0.6	0.11	0.44	0.29	NA	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.561634	NA	NA	NA	NA	NA	0.413	NA	2.6812334
1384	19	54205961	54205961	T	A	upstream	MIR518B	NA	NA	NA	upstream	ENSG00000207862	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs10414727	0.39	0.39	0.405	0.42512	0.3181	0.3601	0.3199	0.5915	0.4519	0.32	0.34	0.29	0.63	0.3477	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.577823	NA	NA	0.320491	0.567602	ID=COSN165941;OCCURENCE=1(breast)	0.413	NA	2.6803756
1384	21	47705237	47705237	T	C	upstream	MCM3AP	NA	NA	NA	UTR5	ENSG00000160294	ENST00000397708:c.-37A>G,ENST00000426537:c.-37A>G	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs17176131	0.37	0.37	0.349	0.358427	0.4284	0.2837	0.5058	0.2852	0.3579	0.43	0.26	0.5	0.31	0.4326	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.633545	NA	NA	0.458808	0.325919	NA	0.254	NA	2.680192
1384	16	56868700	56868700	A	G	intronic	NUP93	NA	NA	NA	intronic	ENSG00000102900	NA	NA	NA	NA	NA	16q13	NA	NA	NA	NA	rs1347591	0.52	0.52	0.515	0.541733	0.4046	0.6706	0.4899	0.5424	0.5859	0.39	0.69	0.49	0.53	0.4775	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.741671	3.741671	NA	0.438125	0.538899	NA	0.486	NA	2.679775
1384	1	86590915	86590915	G	A	exonic	COL24A1	NA	synonymous SNV	COL24A1:NM_152890:exon3:c.C1104T:p.S368S	exonic	ENSG00000171502	NA	synonymous SNV	ENSG00000171502:ENST00000370571:exon3:c.C1104T:p.S368S,ENSG00000171502:ENST00000426639:exon3:c.C1104T:p.S368S,ENSG00000171502:ENST00000436319:exon3:c.C1104T:p.S368S	NA	NA	1p22.3	NA	NA	NA	NA	rs2174767	0.96	0.96	0.957	0.964457	0.999	0.9722	0.987	0.8941	1	1	0.97	0.99	0.89	0.9892	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.800185	NA	NA	0.999272	0.92001	NA	0.957	NA	2.6791946
1384	12	64011062	64011062	A	G	intronic	DPY19L2	NA	NA	NA	intronic	ENSG00000177990	NA	NA	NA	NA	NA	12q14.2	NA	NA	NA	NA	rs4105524	0.41	0.41	0.408	0.407348	0.3966	0.4067	0.3905	0.3691	0.4826	0.41	0.45	0.41	0.37	0.4837	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.639081	NA	NA	0.440696	0.386964	NA	0.333	NA	2.679004
1384	6	29523646	29523646	G	C	UTR3	UBD	NM_006398:c.*11C>G	NA	NA	UTR3	ENSG00000204681,ENSG00000213886	ENST00000355973:c.*484C>G;ENST00000377050:c.*11C>G	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs444013	0.65	0.65	0.619	0.709065	0.5129	0.7669	0.647	0.764	0.8211	0.52	0.71	0.61	0.79	0.6197	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.436801	NA	NA	0.522518	0.725678	NA	0.609	NA	2.6782154
1384	20	25261784	25261784	G	A	intronic	PYGB	NA	NA	NA	intronic	ENSG00000100994	NA	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	rs2261747	0.53	0.53	0.516	0.514976	0.4314	0.9107	0.3415	0.3729	0.5082	0.43	0.92	0.34	0.36	0.4552	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.048638	NA	NA	0.435349	0.366319	NA	0.449	NA	2.678051
1384	5	150565724	150565724	C	T	intronic	CCDC69	NA	NA	NA	intronic	ENSG00000198624	NA	NA	NA	NA	NA	5q33.1	NA	NA	NA	NA	rs248426	0.43	0.43	0.42	0.408546	0.4423	0.3482	0.3991	0.4516	0.3845	0.45	0.36	0.42	0.49	0.428	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.558615	NA	NA	0.452209	0.462324	NA	0.413	NA	2.677491
1384	15	49083577	49083577	C	T	intronic	CEP152	NA	NA	NA	intronic	ENSG00000103995	NA	NA	NA	NA	NA	15q21.1	NA	NA	NA	NA	rs58156069	0.38	0.38	0.386	0.344649	0.4652	0.3185	0.3804	0.2723	0.32	0.45	0.32	0.42	0.29	0.3975	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.205458	NA	NA	0.460074	0.306264	NA	0.391	NA	2.677226
1384	2	190617643	190617643	A	G	exonic	OSGEPL1	NA	synonymous SNV	OSGEPL1:NM_022353:exon6:c.T1026C:p.N342N	exonic	ENSG00000128694	NA	synonymous SNV	ENSG00000128694:ENST00000264151:exon6:c.T1026C:p.N342N,ENSG00000128694:ENST00000522700:exon6:c.T1026C:p.N342N,ENSG00000128694:ENST00000519810:exon7:c.T1026C:p.N342N	NA	NA	2q32.2	NA	NA	NA	NA	rs2243876	0.97	0.97	0.973	0.970248	1	1	0.9942	0.8903	1	1	0.98	0.99	0.91	0.9908	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.24269	NA	NA	0.999515	0.900107	NA	0.978	NA	2.6763516
1384	9	119382768	119382768	A	G	intronic	ASTN2	NA	NA	NA	intronic	ENSG00000148219	NA	NA	NA	NA	NA	9q33.1	NA	NA	NA	NA	rs2295741	0.43	0.43	0.365	0.397564	0.4274	0.4633	0.5576	0.2821	0.3415	0.44	0.45	0.53	0.29	0.4471	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.059749	NA	NA	0.449186	0.298911	NA	0.304	NA	2.676314
1384	3	42019565	42019565	C	T	intergenic	ULK4,TRAK1	dist=15905;dist=113181	NA	NA	downstream	ENSG00000235339	NA	NA	NA	NA	NA	3p22.1	NA	NA	NA	NA	rs7634985	0.73	0.73	0.709	0.713858	0.8241	0.8522	0.8256	0.3782	0.8323	0.82	0.84	0.83	0.39	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.940432	NA	NA	NA	NA	NA	0.674	NA	2.6759
1384	14	22204568	22204568	G	A	intergenic	OR4E2,DAD1	dist=70330;dist=829239	NA	NA	intronic	ENSG00000211778	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs2049788	0.27	0.27	0.258	0.275359	0.3439	0.1508	0.2767	0.2519	0.364	0.35	0.16	0.29	0.25	0.3235	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.380743	1.380743	NA	0.3236	0.280414	NA	0.283	NA	2.6756667
1384	20	25271086	25271086	T	C	intronic	PYGB	NA	NA	NA	intronic	ENSG00000100994	NA	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	rs2257432	0.55	0.55	0.543	0.536342	0.4314	0.9107	0.3473	0.4508	0.5082	0.44	0.93	0.35	0.44	0.4598	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.554891	NA	NA	0.433372	0.431003	NA	0.486	NA	2.675428
1385	7	132855307	132855307	A	G	intergenic	CHCHD3,EXOC4	dist=88479;dist=82516	NA	NA	upstream	ENSG00000237821	NA	NA	NA	NA	NA	7q33	NA	NA	NA	NA	rs11972453	0.86	0.86	0.814	0.88119	0.825	0.9365	0.8919	0.8411	0.9284	0.81	0.94	0.88	0.81	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.565939	NA	NA	NA	NA	NA	0.841	NA	2.675
1385	15	41165739	41165739	A	C	intronic	RHOV	NA	NA	NA	intronic	ENSG00000104140	NA	NA	NA	NA	NA	15q15.1	NA	Name=BAF155	NA	NA	rs1814692	0.8	0.8	0.775	0.807708	0.7614	0.8581	0.8199	0.8018	0.8027	0.76	0.87	0.8	0.78	0.8017	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.802672	NA	NA	0.761955	0.790618	NA	0.826	NA	2.674945
1385	10	129846010	129846010	G	A	intronic	PTPRE	NA	NA	NA	intronic	ENSG00000132334	NA	NA	NA	NA	NA	10q26.2	NA	Name=Pol2,Pol2(b),ZNF263,Pol2-4H8	NA	NA	rs7911904	0.8	0.8	0.802	0.786941	0.7565	0.8264	0.8415	0.7481	0.7914	0.76	0.84	0.8	0.81	0.7855	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.591203	NA	NA	0.783488	0.762823	NA	0.688	NA	2.674512
1385	20	50224161	50224161	C	T	intronic	ATP9A	NA	NA	NA	intronic	ENSG00000054793	NA	NA	NA	NA	NA	20q13.2	NA	NA	NA	NA	rs2273089	0.43	0.43	0.417	0.442492	0.4374	0.2202	0.5778	0.6309	0.3262	0.43	0.26	0.53	0.57	0.4487	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.501324	NA	NA	0.439535	0.60236	NA	0.362	NA	2.674365
1385	4	39301605	39301605	G	C	intronic	RFC1	NA	NA	NA	intronic	ENSG00000035928	NA	NA	NA	NA	NA	4p14	NA	NA	NA	NA	rs2066788	0.48	0.48	0.468	0.49401	0.4533	0.3819	0.3732	0.7874	0.3405	0.44	0.36	0.36	0.76	0.4398	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.002738	NA	NA	0.432907	0.71448	NA	0.514	NA	2.673993
1385	2	98887116	98887116	G	C	intronic	VWA3B	NA	NA	NA	intronic	ENSG00000168658	NA	NA	NA	NA	NA	2q11.2	NA	NA	NA	NA	rs4851955	0.39	0.39	0.341	0.330471	0.4563	0.2024	0.5043	0.3654	0.1626	0.48	0.23	0.49	0.37	0.4194	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.511456	NA	NA	0.450689	0.37852	NA	0.442	NA	2.673611
1385	17	79249997	79249997	C	T	intronic	SLC38A10	NA	NA	NA	intronic	ENSG00000157637	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs9898133	0.43	0.43	0.419	0.427915	0.4374	0.1825	0.4092	0.7837	0.2035	0.43	0.19	0.38	0.75	0.465	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.809027	NA	NA	0.424744	0.744986	NA	0.565	NA	2.672856
1385	11	22364758	22364758	C	T	intronic	SLC17A6	NA	NA	NA	intronic	ENSG00000091664	NA	NA	NA	NA	NA	11p14.3	NA	NA	NA	NA	rs2278751	0.27	0.27	0.246	0.2502	0.4851	0.0516	0.2896	0.1513	0.319	0.48	0.05	0.36	0.14	0.3724	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.57414	1.57414	NA	0.469651	0.200862	NA	0.333	NA	2.672849
1385	15	60678328	60678328	C	T	intronic	ANXA2	NA	NA	NA	UTR5	ENSG00000182718	ENST00000560014:c.-54G>A	NA	NA	NA	NA	15q22.2	NA	NA	Name=7	NA	rs11858864	0.83	0.83	0.805	0.838458	0.829	0.999	0.8689	0.6188	0.9581	0.83	1	0.86	0.61	0.8428	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.822956	NA	NA	0.822442	0.637767	NA	0.754	NA	2.6724247
1385	8	141774282	141774282	A	C	intronic	PTK2	NA	NA	NA	intronic	ENSG00000169398	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs7840381	0.46	0.46	0.418	0.458067	0.4284	0.5794	0.5994	0.2625	0.5276	0.42	0.65	0.53	0.27	0.4754	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.701414	NA	NA	0.423837	0.273264	NA	0.341	NA	2.672363
1385	4	57194525	57194525	C	G	UTR3	KIAA1211	NM_020722:c.*555C>G	NA	NA	UTR3	ENSG00000109265	ENST00000504228:c.*555C>G	NA	NA	NA	NA	4q12	NA	NA	NA	NA	rs6834736	0.51	0.51	0.498	0.538538	0.5467	0.2867	0.6816	0.6225	0.5746	0.55	0.27	0.65	0.62	0.5503	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.199789	NA	NA	0.564289	0.583904	NA	0.514	NA	2.6720444
1385	7	134928033	134928033	G	T	intronic	STRA8	NA	NA	NA	intronic	ENSG00000146857	NA	NA	NA	NA	NA	7q33	NA	NA	NA	NA	rs62481958	0.33	0.33	0.314	0.35603	0.4573	0.124	0.3963	0.2905	0.5511	0.46	0.12	0.39	0.32	0.42	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.285122	NA	NA	0.451047	0.316841	NA	0.42	NA	2.671653
1385	20	25262789	25262789	T	C	intronic	PYGB	NA	NA	NA	intronic	ENSG00000100994	NA	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	rs2261790	0.55	0.55	0.512	0.536741	0.4334	0.9107	0.3473	0.4508	0.5082	0.44	0.93	0.35	0.44	0.463	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.303046	NA	NA	0.431961	0.424648	NA	0.457	NA	2.671639
1385	9	127083725	127083725	C	T	intronic	NEK6	NA	NA	NA	intronic	ENSG00000119408	NA	NA	NA	NA	NA	9q33.3	NA	NA	NA	NA	rs10760352	0.53	0.53	0.515	0.551518	0.4115	0.6756	0.4568	0.5787	0.5982	0.41	0.68	0.48	0.57	0.4851	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.624739	NA	NA	0.43186	0.562188	NA	0.493	NA	2.67154
1385	4	156283302	156283302	G	A	intronic	MAP9	NA	NA	NA	ncRNA_intronic	ENSG00000250910	NA	NA	NA	NA	NA	4q32.1	NA	NA	NA	NA	rs6829123	0.67	0.67	0.678	0.653954	0.5557	0.7946	0.5346	0.7844	0.5184	0.57	0.8	0.53	0.78	0.5786	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.95455	NA	NA	0.527681	0.72424	NA	0.572	NA	2.6713523
1385	4	6698706	6698706	A	C	exonic	S100P	NA	synonymous SNV	S100P:NM_005980:exon2:c.A225C:p.I75I	exonic	ENSG00000163993	NA	synonymous SNV	ENSG00000163993:ENST00000296370:exon2:c.A225C:p.I75I	NA	NA	4p16.1	NA	NA	NA	NA	rs11733989	0.99	0.99	0.99	0.984026	1	1	0.9885	0.9455	1	1	1	1	0.97	0.9957	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.979522	NA	NA	0.999767	0.952792	NA	0.986	NA	2.6711996
1385	9	130259618	130259618	A	C	intronic	LRSAM1	NA	NA	NA	intronic	ENSG00000148356	NA	NA	NA	NA	NA	9q33.3	NA	Name=Pol2(phosphoS2),E2F6	NA	NA	rs2248822	0.73	0.73	0.694	0.728834	0.7903	0.6935	0.8084	0.6324	0.7761	0.8	0.7	0.76	0.64	0.7744	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.153273	NA	NA	0.764767	0.687472	NA	0.79	NA	2.670533
1385	1	151396037	151396037	A	C	intronic	POGZ	NA	NA	NA	intronic	ENSG00000143442	NA	NA	NA	Score=336;Name=lod=31	NA	1q21.3	NA	NA	NA	NA	rs2274534	0.49	0.49	0.489	0.490815	0.835	0.2113	0.464	0.3268	0.6656	0.84	0.18	0.52	0.29	0.6746	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.364459	NA	NA	0.82093	0.384703	NA	0.601	NA	2.66947
1385	10	72532238	72532238	T	C	intronic	TBATA	NA	NA	NA	intronic	ENSG00000166220	NA	NA	NA	NA	NA	10q22.1	NA	NA	NA	NA	rs2253801	0.44	0.44	0.417	0.448083	0.4473	0.3889	0.5548	0.4592	0.4192	0.43	0.4	0.54	0.44	0.4415	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.879844	NA	NA	0.441744	0.444167	NA	0.391	NA	2.669456
1385	17	74557681	74557681	A	C	ncRNA_intronic	SNHG16	NA	NA	NA	ncRNA_exonic	ENSG00000163597	NA	NA	NA	NA	NA	17q25.1	NA	NA	Name=37	NA	rs4510053	0.99	0.99	0.988	0.991613	1	1	1	0.9682	1	1	1	1	0.98	0.9979	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.858598	1.858598	NA	1	0.977169	NA	0.986	NA	2.6687666
1385	1	201336984	201336984	C	T	intronic	TNNT2	NA	NA	NA	intronic	ENSG00000118194	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs3729843	0.3	0.3	0.235	0.285543	0.4722	0.1815	0.4755	0.0212	0.4233	0.47	0.18	0.49	0.04	0.4128	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.527389	NA	NA	0.446628	0.093055	NA	0.239	NA	2.668372
1385	3	119533910	119533910	T	C	exonic	NR1I2	NA	synonymous SNV	NR1I2:NM_003889:exon6:c.T879C:p.N293N,NR1I2:NM_022002:exon6:c.T996C:p.N332N,NR1I2:NM_033013:exon6:c.T768C:p.N256N	exonic	ENSG00000144852	NA	synonymous SNV	ENSG00000144852:ENST00000337940:exon6:c.T996C:p.N332N,ENSG00000144852:ENST00000393716:exon6:c.T879C:p.N293N,ENSG00000144852:ENST00000466380:exon6:c.T768C:p.N256N	NA	NA	3q13.33	NA	NA	NA	NA	rs4058490	1	1	1	0.999401	1	1	0.9971	1	0.999	1	1	1	1	0.9999	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.354261	NA	NA	0.999884	0.999092	NA	1	NA	2.6668826
1385	4	6698667	6698667	T	C	exonic	S100P	NA	synonymous SNV	S100P:NM_005980:exon2:c.T186C:p.D62D	exonic	ENSG00000163993	NA	synonymous SNV	ENSG00000163993:ENST00000296370:exon2:c.T186C:p.D62D	NA	NA	4p16.1	NA	NA	NA	NA	rs11734898	1	1	1	0.999601	1	1	1	0.9985	1	1	1	1	1	0.9998	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.024025	NA	NA	1	0.998638	NA	1	NA	2.6668666
1385	6	24460679	24460679	T	C	intronic	GPLD1	NA	NA	NA	intronic	ENSG00000112293	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs2793434	0.38	0.38	0.402	0.39397	0.4324	0.3661	0.3862	0.3631	0.4305	0.42	0.35	0.38	0.37	0.4328	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.642004	NA	NA	0.468168	0.357197	NA	0.312	NA	2.666632
1385	22	51063987	51063987	G	C	intronic	ARSA	NA	NA	NA	intronic	ENSG00000100299	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs762674	0.82	0.82	0.828	0.819089	0.7704	0.9752	0.8487	0.7118	0.8323	0.76	0.97	0.81	0.75	0.7977	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.506849	NA	NA	0.765643	0.719246	NA	0.862	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000078938.1;CLNDSDB=.;CLNDSDBID=.	2.666257
1385	5	6605532	6605532	C	A	intronic	NSUN2	NA	NA	NA	intronic	ENSG00000037474	NA	NA	NA	NA	NA	5p15.31	NA	NA	NA	NA	rs2303707	0.68	0.68	NA	0.675319	0.673	0.6726	0.6182	0.739	0.635	0.66	0.67	0.65	0.76	0.6609	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.361741	NA	NA	NA	NA	NA	0.674	NA	2.6661
1385	3	46753976	46753976	T	C	intronic	PRSS50	NA	NA	NA	intronic	ENSG00000206549	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs9815362	0.52	0.52	0.523	0.555711	0.4195	0.494	0.536	0.7738	0.4785	0.41	0.48	0.53	0.74	0.4806	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.445386	NA	NA	0.433837	0.701316	NA	0.5	NA	2.666063
1385	2	149853960	149853960	A	G	intronic	KIF5C	NA	NA	NA	intronic	ENSG00000168280	NA	NA	NA	NA	NA	2q23.1	NA	NA	NA	NA	rs6738277	0.59	0.59	0.606	0.631589	0.661	0.3056	0.6499	0.8238	0.6646	0.64	0.32	0.67	0.79	0.6731	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.704672	NA	NA	NA	NA	NA	0.717	NA	2.6659
1385	5	150564975	150564975	T	C	intronic	CCDC69	NA	NA	NA	intronic	ENSG00000198624	NA	NA	NA	NA	NA	5q33.1	NA	NA	NA	NA	rs248428	0.42	0.42	0.44	0.414736	0.4473	0.3502	0.3991	0.4516	0.409	0.45	0.35	0.42	0.47	0.4331	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.019126	NA	NA	0.453721	0.462551	NA	0.413	NA	2.665879
1385	3	48505964	48505964	C	A	intronic	ATRIP	NA	NA	NA	intronic	ENSG00000164053	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs2242150	0.38	0.38	0.392	0.383586	0.4632	0.3135	0.3112	0.4697	0.3088	0.45	0.29	0.33	0.42	0.3998	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.486613	NA	NA	0.471163	0.465502	NA	0.471	NA	2.665837
1385	12	52660904	52660904	C	T	intergenic	KRT7,KRT81	dist=18195;dist=18793	NA	NA	intronic	ENSG00000170442	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs2857686	0.48	0.48	0.508	0.498403	0.5139	0.2798	0.3732	0.7277	0.4867	0.51	0.28	0.37	0.73	0.4872	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.451422	NA	NA	NA	NA	NA	0.536	NA	2.6655667
1385	1	230371883	230371883	G	A	intronic	GALNT2	NA	NA	NA	intronic	ENSG00000143641	NA	NA	NA	NA	NA	1q42.13	NA	NA	NA	NA	rs3811488	0.67	0.67	0.681	0.68151	0.3986	0.8978	0.6758	0.8699	0.499	0.4	0.91	0.64	0.84	0.5219	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.275047	NA	NA	0.414186	0.787108	NA	0.71	NA	2.665314
1385	17	64050007	64050007	G	A	intronic	CEP112	NA	NA	NA	intronic	ENSG00000154240	NA	NA	NA	NA	NA	17q24.1	NA	NA	NA	NA	rs11079637	0.53	0.53	0.489	0.536342	0.4374	0.875	0.6585	0.2315	0.6145	0.44	0.87	0.63	0.23	0.4924	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.753519	NA	NA	0.405116	0.258511	NA	0.478	NA	2.665084
1386	X	320580	320580	T	C	intronic	PPP2R3B	NA	NA	NA	intronic	ENSG00000167393	NA	NA	NA	NA	NA	Xp22.33	NA	NA	NA	NA	rs6603251	0.7	0.7	0.67886	NA	NA	NA	NA	NA	NA	0.67	0.62	0.69	0.84	0.6611	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.049575	NA	NA	0.674033	0.835616	NA	0.71	NA	2.664867
1386	5	118968423	118968423	T	G	intronic	FAM170A	NA	NA	NA	intronic	ENSG00000164334	NA	NA	NA	NA	NA	5q23.1	NA	NA	NA	NA	rs328698	0.42	0.42	0.423	0.4377	0.4453	0.496	0.3804	0.3298	0.5562	0.42	0.52	0.39	0.33	0.4457	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.212072	NA	NA	0.444364	0.316615	NA	0.457	NA	2.664636
1386	3	125223456	125223456	C	T	intronic	SNX4	NA	NA	NA	intronic	ENSG00000114520	NA	NA	NA	NA	NA	3q21.2	NA	NA	NA	NA	rs2076724	0.5	0.5	0.508	0.51877	0.4304	0.4127	0.5605	0.6551	0.5051	0.44	0.39	0.55	0.67	0.4738	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.516084	NA	NA	0.431279	0.623468	NA	0.572	NA	2.664521
1386	10	121571507	121571507	T	C	intronic	INPP5F	NA	NA	NA	intronic	ENSG00000198825	NA	NA	NA	NA	NA	10q26.11	NA	NA	NA	NA	rs3781503	0.38	0.38	0.349	0.442492	0.4463	0.2302	0.3617	0.4372	0.7219	0.45	0.21	0.39	0.47	0.4449	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.412948	NA	NA	0.444419	0.421925	NA	0.457	NA	2.664381
1386	4	69340500	69340500	A	G	intronic	TMPRSS11E	NA	NA	NA	intronic	ENSG00000087128	NA	NA	NA	NA	NA	4q13.2	NA	NA	NA	NA	rs2603187	0.56	0.56	0.594	0.584665	0.4433	0.7688	0.451	0.6021	0.6115	0.44	0.76	0.47	0.59	0.4777	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.795282	NA	NA	0.414844	0.536768	NA	0.659	NA	2.664156
1386	4	3255258	3255258	A	G	intronic	MSANTD1	NA	NA	NA	intronic	ENSG00000188981	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs2798227	0.35	0.35	0.291	0.299121	0.4841	0.3829	0.3573	0.0272	0.3487	0.49	0.41	0.36	0.04	0.4077	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.035538	NA	NA	0.44407	0.110304	NA	0.406	NA	2.66413
1386	3	184766392	184766392	G	A	intronic	VPS8	NA	NA	NA	intronic	ENSG00000156931	NA	NA	NA	NA	NA	3q27.2	NA	NA	NA	NA	rs3821751	0.53	0.53	0.52	0.551717	0.4404	0.6667	0.4914	0.5454	0.5992	0.46	0.64	0.52	0.52	0.4757	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.102281	NA	NA	0.419966	0.522481	NA	0.543	NA	2.663934
1386	19	36582270	36582270	G	A	intronic	WDR62	NA	NA	NA	intronic	ENSG00000075702	NA	NA	NA	NA	NA	19q13.12	NA	NA	NA	NA	rs2301736	0.47	0.47	0.44	0.41254	0.4493	0.5774	0.5562	0.2716	0.2935	0.46	0.6	0.51	0.31	0.4329	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.944526	NA	NA	0.453953	0.295733	NA	0.254	NA	2.663847
1386	1	229452387	229452387	C	T	intergenic	RAB4A,CCSAP	dist=10747;dist=4365	NA	NA	intergenic	ENSG00000168118,ENSG00000237481	dist=10746;dist=2763	NA	NA	NA	NA	1q42.13	NA	NA	NA	NA	rs237819	0.64	0.64	0.627	0.607029	0.67	0.495	0.6441	0.7209	0.4775	0.66	0.53	0.65	0.71	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.110198	NA	NA	NA	NA	NA	0.746	NA	2.6633334
1386	8	120847123	120847123	C	T	UTR3	DSCC1	NM_024094:c.*10G>A	NA	NA	UTR3	ENSG00000136982	ENST00000313655:c.*10G>A	NA	NA	NA	NA	8q24.12	NA	NA	NA	NA	rs1055131	0.56	0.56	0.547	0.524161	0.5507	0.4296	0.6571	0.5991	0.3988	0.56	0.42	0.64	0.65	0.5571	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.433242	NA	NA	0.562689	0.605084	ID=COSN168410;OCCURENCE=1(large_intestine)	0.703	NA	2.6628444
1386	17	80895253	80895253	G	A	intronic	TBCD	NA	NA	NA	intronic	ENSG00000141556	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs8079398	0.57	0.57	0.594	0.620407	0.4374	0.5764	0.4092	0.8676	0.6697	0.42	0.56	0.45	0.88	0.4761	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.517489	NA	NA	0.423874	0.814661	NA	0.681	NA	2.662626
1386	15	74000839	74000839	G	A	intronic	CD276	NA	NA	NA	intronic	ENSG00000103855	NA	NA	NA	NA	NA	15q24.1	NA	NA	NA	NA	rs2291011	0.36	0.36	0.334	0.323482	0.4632	0.3274	0.3963	0.1422	0.3691	0.47	0.36	0.41	0.14	0.4265	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.134557	NA	NA	0.447754	0.179254	NA	0.333	NA	2.662546
1386	19	1059004	1059004	A	G	intronic	ABCA7	NA	NA	NA	intronic	ENSG00000064687	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs2279796	0.54	0.54	0.553	0.574681	0.4245	0.3641	0.4784	0.9554	0.5	0.44	0.39	0.49	0.92	0.4856	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.729013	1.729013	NA	0.427558	0.868529	NA	0.464	NA	2.662342
1386	21	32525345	32525345	G	A	intronic	TIAM1	NA	NA	NA	intronic	ENSG00000156299	NA	NA	NA	NA	NA	21q22.11	NA	NA	NA	NA	rs723469	0.46	0.46	0.46	0.474042	0.4404	0.4266	0.5447	0.4652	0.5194	0.46	0.4	0.53	0.5	0.4535	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.190704	NA	NA	0.443837	0.453246	NA	0.413	NA	2.662263
1386	2	113942903	113942903	A	C	intronic	PSD4	NA	NA	NA	intronic	ENSG00000125637	NA	NA	NA	NA	NA	2q13	NA	NA	NA	NA	rs1975535	0.58	0.58	0.58	0.573882	0.4423	0.5972	0.5159	0.7383	0.5041	0.46	0.61	0.53	0.75	0.4872	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.751698	NA	NA	0.408605	0.687926	NA	0.609	NA	2.661895
1386	6	139487394	139487394	T	C	intronic	HECA	NA	NA	NA	ncRNA_exonic	ENSG00000231329	NA	NA	NA	NA	NA	6q24.1	NA	NA	NA	NA	rs7768941	0.43	0.43	0.426	0.420927	0.5984	0.0595	0.4553	0.5817	0.3691	0.59	0.04	0.51	0.6	0.5046	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.945244	1.945244	NA	0.568504	0.565849	NA	0.558	NA	2.6618293
1386	4	156276841	156276841	T	C	intronic	MAP9	NA	NA	NA	ncRNA_intronic	ENSG00000250910	NA	NA	NA	NA	NA	4q32.1	NA	NA	NA	NA	rs6834126	0.67	0.67	0.674	0.654153	0.5557	0.7946	0.5346	0.7844	0.5194	0.57	0.8	0.53	0.78	0.5892	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.017493	NA	NA	0.52675	0.723535	NA	0.623	NA	2.6616833
1386	11	18456235	18456235	A	T	intronic	LDHC	NA	NA	NA	intronic	ENSG00000166796	NA	NA	NA	NA	NA	11p15.1	NA	NA	NA	NA	rs4757664	0.59	0.59	0.393	0.621406	0.7266	0.6091	0.7233	0.3797	0.7802	0.69	0.58	0.68	0.39	NA	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.043757	NA	NA	0.612147	0.324541	NA	0.435	NA	2.661253
1386	17	8647931	8647931	G	C	UTR5	CCDC42	NM_144681:c.-4C>G,NM_001158261:c.-4C>G	NA	NA	UTR5	ENSG00000161973	ENST00000293845:c.-4C>G,ENST00000539522:c.-4C>G,ENST00000581598:c.-4C>G	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs10852904	0.51	0.51	0.475	0.498602	0.5557	0.6091	0.647	0.2368	0.5746	0.56	0.58	0.61	0.3	0.5619	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.646358	1.646358	NA	0.554535	0.286428	NA	0.413	NA	2.6611984
1386	20	25259807	25259807	G	A	intronic	PYGB	NA	NA	NA	intronic	ENSG00000100994	NA	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	rs2261115	0.53	0.53	0.542	0.513379	0.4324	0.9107	0.3401	0.3661	0.5092	0.44	0.93	0.34	0.37	0.4715	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.002167	NA	NA	0.435	0.363595	NA	0.449	NA	2.6611
1386	10	96014622	96014622	C	G	intronic	PLCE1	NA	NA	NA	intronic	ENSG00000138193	NA	NA	NA	NA	NA	10q23.33	NA	NA	NA	NA	rs10786156	0.47	0.47	0.487	0.485224	0.4573	0.5357	0.3473	0.59	0.4182	0.43	0.49	0.37	0.57	0.4375	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.389252	NA	NA	0.444134	0.54661	NA	0.5	NA	2.661066
1386	20	44517360	44517360	T	C	ncRNA_exonic	NEURL2	NA	NA	NA	UTR3	ENSG00000124257	ENST00000545238:c.*123A>G,ENST00000372518:c.*37A>G	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs1516580	0.61	0.61	0.59	0.616014	0.6083	0.6746	0.7363	0.5681	0.5429	0.62	0.65	0.68	0.5	0.6267	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.052213	NA	NA	0.60407	0.592828	NA	0.623	NA	2.66093
1386	3	10302369	10302369	T	C	intronic	TATDN2	NA	NA	NA	intronic	ENSG00000157014,ENSG00000272410	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs451952	0.56	0.56	0.557	0.596246	0.4304	0.9643	0.4207	0.3737	0.8129	0.41	0.98	0.43	0.4	0.5108	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.040381	NA	NA	0.398038	0.367473	NA	0.58	NA	2.660762
1386	10	5926079	5926079	A	C	intronic	ANKRD16	NA	NA	NA	intronic	ENSG00000134461	NA	NA	NA	NA	NA	10p15.1	NA	NA	NA	NA	rs3750657	0.37	0.37	0.412	0.398562	0.4801	0.1895	0.3487	0.6089	0.2812	0.43	0.14	0.39	0.51	0.4329	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.453091	NA	NA	0.426279	0.511348	ID=COSN163539;OCCURENCE=1(breast)	NA	NA	2.660721
1386	5	167182055	167182055	G	A	intronic	TENM2	NA	NA	NA	UTR5	ENSG00000145934	ENST00000519204:c.-4G>A,ENST00000520394:c.-4G>A	NA	NA	NA	NA	5q34	NA	Name=ZNF263	NA	NA	rs1862875	0.78	0.78	0.739	0.746406	0.83	0.995	0.8689	0.3404	0.8661	0.85	1	0.85	0.36	0.8252	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.178317	NA	NA	0.850917	0.456954	NA	0.674	NA	2.6605497
1386	20	43034660	43034660	T	C	intronic	HNF4A	NA	NA	NA	intronic	ENSG00000101076	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs736824	0.52	0.52	0.514	0.554712	0.4066	0.7778	0.4669	0.4395	0.6953	0.43	0.76	0.42	0.46	0.5017	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.748635	NA	NA	0.431279	0.445529	NA	0.464	NA	2.660421
1386	2	108863650	108863650	A	C	upstream	SULT1C3	NA	NA	NA	upstream	ENSG00000196228	NA	NA	NA	NA	NA	2q12.3	NA	NA	NA	NA	rs9646947	0.19	0.19	0.164	0.215056	0.3588	0.1032	0.2579	0.0257	0.408	0.35	0.08	0.26	0.03	0.305	0.35	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.538043	NA	NA	0.342558	0.081026	NA	0.246	NA	2.6603086
1386	12	55790117	55790117	A	T	intergenic	OR6C75,OR6C65	dist=30284;dist=4196	NA	NA	upstream	ENSG00000257414	NA	NA	NA	NA	NA	12q13.2	NA	NA	NA	NA	rs6581039	0.78	0.78	0.735	0.780551	0.841	0.9266	0.8746	0.4879	0.8967	0.84	0.91	0.87	0.48	NA	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.555824	NA	NA	NA	NA	NA	0.681	NA	2.659
1386	17	41154817	41154817	A	C	intronic	RPL27	NA	NA	NA	intronic	ENSG00000131469	NA	NA	NA	NA	NA	17q21.31	NA	Name=Pol2-4H8,CTCF_(SC-5916)	NA	NA	rs11871636	0.79	0.79	0.792	0.749002	0.7664	0.8472	0.7968	0.6581	0.7188	0.77	0.87	0.77	0.72	0.7815	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.056727	NA	NA	0.793372	0.67862	NA	0.797	NA	2.658728
1386	2	69420596	69420596	T	C	intronic	ANTXR1	NA	NA	NA	intronic	ENSG00000169604	NA	NA	NA	NA	NA	2p13.3	NA	NA	NA	NA	rs7584057	0.61	0.61	0.3	0.712061	0.4851	0.8958	0.5447	0.8722	0.6585	0.44	0.8	0.5	0.72	0.5512	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.854408	NA	NA	0.305	0.674989	NA	0.094	NA	2.6587
1386	2	10126416	10126416	A	G	intronic	GRHL1	NA	NA	NA	intronic	ENSG00000134317	NA	NA	NA	NA	NA	2p25.1	NA	NA	NA	NA	rs16867274	0.5	0.5	0.472	0.502396	0.4384	0.4008	0.6196	0.6884	0.3384	0.42	0.37	0.61	0.69	0.4721	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.195978	NA	NA	0.430814	0.657286	NA	0.442	NA	2.658686
1386	12	21627745	21627745	A	G	intronic	RECQL	NA	NA	NA	intronic	ENSG00000004700	NA	NA	NA	NA	NA	12p12.1	NA	NA	NA	NA	rs2159943	0.38	0.38	0.36	0.363219	0.4742	0.4544	0.4063	0.084	0.502	0.47	0.46	0.43	0.12	0.4279	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.393001	NA	NA	0.439274	0.139809	NA	0.217	NA	2.658626
1386	5	137281708	137281708	A	C	intronic	FAM13B	NA	NA	NA	intronic	ENSG00000031003	NA	NA	NA	NA	NA	5q31.2	NA	Name=MafF_(M8194),MafK_(SC-477),MafK_(ab50322)	NA	NA	rs1125979	0.78	0.78	0.782	0.789736	0.7634	0.9712	0.7767	0.5938	0.9039	0.77	0.97	0.73	0.61	0.7964	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.255355	3.255355	NA	0.782093	0.625965	NA	0.717	NA	2.658107
1386	8	143921812	143921812	A	G	intronic	GML	NA	NA	NA	intronic	ENSG00000104499	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs3750247	0.42	0.42	0.409	0.429313	0.4771	0.376	0.4813	0.3933	0.4468	0.46	0.38	0.42	0.4	0.4336	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.730219	NA	NA	0.431395	0.413981	NA	0.435	NA	2.657905
1386	1	19199473	19199473	T	A	intronic	ALDH4A1	NA	NA	NA	intronic	ENSG00000159423,ENSG00000255275	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs28700162	0.46	0.46	0.426	0.471446	0.4513	0.6558	0.5519	0.1989	0.6135	0.43	0.67	0.48	0.24	0.4647	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.440709	NA	NA	0.427326	0.252837	NA	0.471	NA	2.656674
1386	10	5926080	5926080	T	C	intronic	ANKRD16	NA	NA	NA	intronic	ENSG00000134461	NA	NA	NA	NA	NA	10p15.1	NA	NA	NA	NA	rs3750658	0.37	0.37	0.41	0.398562	0.4801	0.1895	0.3487	0.6089	0.2812	0.43	0.14	0.39	0.52	0.4332	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.053645	NA	NA	0.43093	0.519519	ID=COSN163540;OCCURENCE=1(NS)	NA	NA	2.65577
1386	8	22020066	22020066	T	C	intronic	SFTPC	NA	NA	NA	intronic	ENSG00000168484	NA	NA	NA	NA	NA	8p21.3	NA	NA	NA	NA	rs13248346	0.57	0.57	0.537	0.594848	0.4264	0.7599	0.5274	0.6899	0.5174	0.43	0.71	0.51	0.67	0.4934	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.037617	NA	NA	0.424964	0.600723	NA	0.536	NA	2.655236
1387	7	140051063	140051063	C	T	intronic	SLC37A3	NA	NA	NA	intronic	ENSG00000157800	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs12703774	0.4	0.4	0.372	0.385383	0.4553	0.4147	0.3703	0.3033	0.4049	0.46	0.4	0.4	0.31	0.4327	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.25604	NA	NA	0.457326	0.328643	ID=COSM150402;OCCURENCE=1(stomach)	0.457	NA	2.654674
1387	17	64001925	64001925	G	A	intronic	CEP112	NA	NA	NA	intronic	ENSG00000154240	NA	NA	NA	NA	NA	17q24.1	NA	NA	NA	NA	rs1015098	0.54	0.54	0.512	0.536342	0.4374	0.875	0.6585	0.2322	0.6135	0.44	0.87	0.63	0.24	0.4984	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.283014	4.283014	NA	0.409916	0.267833	NA	0.457	NA	2.654284
1387	5	108719151	108719151	G	A	UTR5	PJA2	NM_014819:c.-17C>T	NA	NA	UTR5	ENSG00000198961	ENST00000361189:c.-17C>T,ENST00000361557:c.-17C>T	NA	NA	NA	NA	5q21.3	NA	NA	NA	NA	rs1045704	0.31	0.31	0.283	0.319688	0.5905	0.0565	0.4669	0.0643	0.5532	0.59	0.04	0.46	0.08	0.4965	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.182173	NA	NA	0.592326	0.156449	NA	0.377	NA	2.6540074
1387	11	5603163	5603163	G	A	downstream	OR52B6	NA	NA	NA	ncRNA_intronic	ENSG00000239920	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs10838377	0.69	0.69	0.7	0.716853	0.4761	0.9802	0.67	0.7413	0.6933	0.47	0.97	0.63	0.72	0.5679	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.010261	NA	NA	0.468926	0.704472	NA	0.623	NA	2.6537406
1387	9	116822610	116822610	A	G	intronic	AMBP	NA	NA	NA	intronic	ENSG00000106927	NA	NA	NA	NA	NA	9q32	NA	NA	NA	NA	rs2269456	0.63	0.63	0.632	0.636382	0.673	0.3661	0.5965	0.8585	0.6053	0.66	0.37	0.63	0.87	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.839221	NA	NA	0.673476	0.816474	NA	0.659	NA	2.653524
1387	20	18460641	18460641	G	A	intronic	POLR3F	NA	NA	NA	intronic	ENSG00000132664	NA	NA	NA	NA	NA	20p11.23	NA	NA	NA	NA	rs6081160	0.35	0.35	0.331	0.365615	0.4473	0.4315	0.3415	0.1982	0.4571	0.44	0.37	0.33	0.2	0.4299	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.272044	NA	NA	0.469651	0.241943	NA	0.268	NA	2.653149
1387	9	123943884	123943884	C	T	intronic	RAB14	NA	NA	NA	intronic	ENSG00000119396	NA	NA	NA	NA	NA	9q33.2	NA	NA	NA	NA	rs2296078	0.41	0.41	0.373	0.420128	0.4503	0.5665	0.4899	0.0855	0.6411	0.46	0.59	0.49	0.09	0.4573	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.524289	NA	NA	0.44	0.138675	NA	0.37	NA	2.6524
1387	6	70856536	70856536	C	T	intronic	COL19A1	NA	NA	NA	intronic	ENSG00000082293	NA	NA	NA	NA	NA	6q13	NA	NA	NA	NA	rs7762409	0.46	0.46	0.444	0.496006	0.4553	0.3115	0.4769	0.6573	0.5235	0.44	0.33	0.45	0.66	0.4594	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.208515	NA	NA	0.434165	0.6125	NA	0.37	NA	2.651135
1387	22	19220648	19220648	G	T	intronic	CLTCL1	NA	NA	NA	intronic	ENSG00000070371	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs807458	0.31	0.31	0.287	0.320687	0.4553	0.2758	0.3919	0.0507	0.5429	0.48	0.25	0.38	0.06	0.4146	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.372757	NA	NA	0.479455	0.118297	NA	0.217	NA	2.650645
1387	6	70854183	70854183	A	G	intronic	COL19A1	NA	NA	NA	intronic	ENSG00000082293	NA	NA	NA	NA	NA	6q13	NA	NA	NA	NA	rs9364074	0.45	0.45	0.45	0.478834	0.4553	0.3115	0.4741	0.5938	0.5235	0.44	0.33	0.44	0.59	0.454	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.639684	NA	NA	0.440116	0.581934	NA	0.514	NA	2.650584
1387	12	56814570	56814570	T	G	intronic	TIMELESS	NA	NA	NA	intronic	ENSG00000111602	NA	NA	NA	NA	NA	12q13.3	NA	NA	NA	NA	rs812279	0.52	0.52	0.47	0.525359	0.4334	0.7341	0.5965	0.4312	0.4816	0.44	0.69	0.56	0.44	0.4783	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.971612	NA	NA	0.438023	0.410803	NA	0.435	NA	2.650277
1387	8	30554006	30554006	G	A	intronic	GSR	NA	NA	NA	intronic	ENSG00000104687	NA	NA	NA	NA	NA	8p12	NA	NA	NA	NA	rs8190996	0.43	0.43	0.389	0.423922	0.4483	0.4851	0.487	0.289	0.4734	0.47	0.49	0.49	0.27	0.4494	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.054809	NA	NA	0.452558	0.312528	NA	0.42	NA	2.649742
1387	4	960713	960713	G	A	intronic	DGKQ	NA	NA	NA	intronic	ENSG00000145214	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs4690196	0.39	0.39	0.355	0.341853	0.4483	0.3423	0.5375	0.1513	0.3507	0.45	0.36	0.54	0.21	0.4543	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.306084	NA	NA	0.448006	0.191822	NA	0.348	NA	2.649394
1387	2	170505684	170505684	G	A	intronic	CCDC173	NA	NA	NA	intronic	ENSG00000154479	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	rs3213946	0.39	0.39	0.396	0.401158	0.4195	0.2093	0.2997	0.6165	0.3609	0.42	0.19	0.34	0.58	0.4935	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.116707	NA	NA	0.437868	0.57127	NA	0.464	NA	2.649132
1387	19	1147431	1147431	T	C	intronic	SBNO2	NA	NA	NA	intronic	ENSG00000064932	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs56808651	0.48	0.48	0.396	0.458866	0.5089	0.5982	0.4078	0.326	0.4796	0.51	0.61	0.46	0.3	0.3585	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.387263	NA	NA	0.483635	0.317825	NA	0.196	NA	2.648965
1387	10	15713541	15713541	T	C	intronic	ITGA8	NA	NA	NA	intronic	ENSG00000077943	NA	NA	NA	NA	NA	10p13	NA	NA	NA	NA	rs6602051	0.63	0.63	0.653	0.655351	0.67	0.7143	0.5591	0.5356	0.8098	0.67	0.7	0.57	0.53	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.566769	NA	NA	0.681332	0.566474	NA	0.623	NA	2.648668
1387	6	145114935	145114935	A	G	intronic	UTRN	NA	NA	NA	intronic	ENSG00000152818	NA	NA	NA	NA	NA	6q24.2	NA	NA	NA	NA	rs4243475	0.66	0.66	0.674	0.686502	0.4056	0.8938	0.6599	0.7882	0.6431	0.4	0.91	0.64	0.79	0.5357	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.757553	NA	NA	0.410116	0.726509	NA	0.529	NA	2.648584
1387	6	110714584	110714584	A	T	intronic	DDO	NA	NA	NA	intronic	ENSG00000203797	NA	NA	NA	NA	NA	6q21	NA	NA	NA	NA	rs2235989	0.46	0.46	0.458	0.468251	0.4642	0.4266	0.4597	0.5424	0.4213	0.47	0.38	0.43	0.57	0.4518	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.221701	NA	NA	0.435799	0.528156	NA	0.42	NA	2.648201
1387	12	31301888	31301888	T	C	intergenic	DDX11,FAM60A	dist=44163;dist=131632	NA	NA	ncRNA_exonic	ENSG00000177359	NA	NA	NA	NA	NA	12p11.21	NA	NA	NA	NA	rs11051274	0.31	0.31	0.261	0.334265	0.4433	0.256	0.2723	0.3086	0.3814	0.42	0.24	0.28	0.25	0.477	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.037738	NA	0.25	0.432579	0.286667	NA	0.196	NA	2.647121
1387	7	133989543	133989543	A	G	intronic	SLC35B4	NA	NA	NA	intronic	ENSG00000205060	NA	NA	NA	NA	NA	7q33	NA	NA	NA	NA	rs447266	0.42	0.42	0.385	0.450479	0.4493	0.2708	0.5692	0.4554	0.546	0.46	0.27	0.54	0.42	0.4533	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.212177	NA	NA	0.450814	0.466863	NA	0.384	NA	2.646586
1387	11	113211370	113211370	T	G	intronic	TTC12	NA	NA	NA	intronic	ENSG00000149292	NA	NA	NA	NA	NA	11q23.2	NA	NA	NA	NA	rs10891537	0.26	0.26	0.248	0.226038	0.4851	0.0536	0.2954	0.0734	0.2945	0.48	0.05	0.36	0.08	0.3815	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.036165	NA	NA	0.486848	0.136756	NA	0.174	NA	2.646552
1387	6	159191788	159191788	C	T	intronic	EZR	NA	NA	NA	intronic	ENSG00000092820	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs3212308	0.33	0.33	0.313	0.33127	0.4712	0.1935	0.2608	0.2829	0.4448	0.47	0.16	0.32	0.29	0.4051	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.20356	NA	NA	0.477326	0.325011	NA	0.312	NA	2.646374
1387	6	36712962	36712962	C	T	intronic	CPNE5	NA	NA	NA	intronic	ENSG00000124772	NA	NA	NA	NA	NA	6p21.2	NA	NA	NA	NA	rs743870	0.41	0.41	0.437	0.39996	0.4503	0.3889	0.2695	0.4259	0.4172	0.47	0.41	0.31	0.4	0.4411	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.121309	NA	NA	0.462782	0.41103	NA	0.391	NA	2.645818
1387	8	97256341	97256341	T	A	intronic	MTERFD1	NA	NA	NA	intronic	ENSG00000156469	NA	NA	NA	NA	NA	8q22.1	NA	NA	NA	NA	rs6993518	0.39	0.39	0.395	0.379992	0.4423	0.1815	0.3501	0.5378	0.3282	0.46	0.2	0.33	0.52	0.441	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.672067	NA	NA	0.471395	0.541307	NA	0.464	NA	2.645305
1387	16	72146441	72146441	C	G	UTR3	DHX38	NM_014003:c.*45C>G	NA	NA	UTR3	ENSG00000118557,ENSG00000140829	ENST00000537792:c.*219G>C;ENST00000268482:c.*45C>G,ENST00000536867:c.*45C>G,ENST00000579387:c.*1244C>G,ENST00000563819:c.*45C>G	NA	NA	NA	NA	16q22.2	NA	NA	NA	NA	rs7940	0.55	0.55	0.6	0.589457	0.5487	0.376	0.415	0.8139	0.6718	0.55	0.39	0.44	0.81	0.5641	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.994432	NA	NA	0.575465	0.759782	NA	0.638	NA	2.6450684
1387	5	49698180	49698180	G	A	intronic	EMB	NA	NA	NA	intronic	ENSG00000170571	NA	NA	NA	NA	NA	5q11.1	NA	NA	NA	NA	rs13172025	0.43	0.43	0.465	0.518171	0.4443	0.4831	0.4135	0.6891	0.4734	0.38	0.43	0.41	0.52	0.4569	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.048041	NA	NA	0.453762	0.639773	NA	0.471	NA	2.645038
1387	2	234916831	234916831	A	G	intronic	TRPM8	NA	NA	NA	intronic	ENSG00000144481	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs6734618	0.77	0.77	0.761	0.754992	0.669	0.8075	0.7911	0.8555	0.6278	0.67	0.84	0.76	0.86	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.354338	NA	NA	0.685966	0.812861	NA	0.594	NA	2.645034
1387	19	5265222	5265222	G	A	intronic	PTPRS	NA	NA	NA	intronic	ENSG00000105426	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs4807703	0.5	0.5	0.451	0.458666	0.4314	0.7937	0.5576	0.1906	0.4335	0.44	0.77	0.57	0.21	0.463	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.72372	NA	NA	0.460581	0.24512	NA	0.399	NA	2.645019
1387	5	36142589	36142589	T	A	intronic	LMBRD2	NA	NA	NA	intronic	ENSG00000164187	NA	NA	NA	NA	NA	5p13.2	NA	NA	NA	NA	rs267764	0.44	0.44	0.358	0.468051	0.4742	0.3542	0.4049	0.6808	0.3364	0.45	0.31	0.38	0.6	0.463	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.132273	NA	NA	0.417791	0.57626	NA	0.167	NA	2.645009
1388	8	145620296	145620296	C	G	intronic	CPSF1	NA	NA	NA	intronic	ENSG00000071894	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs2280837	0.51	0.51	0.468	0.548123	0.4274	0.6706	0.536	0.4902	0.6329	0.41	0.65	0.52	0.48	0.4989	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.893234	NA	NA	0.428821	0.480009	NA	0.471	NA	2.644879
1388	7	47884555	47884555	A	G	intronic	PKD1L1	NA	NA	NA	intronic	ENSG00000136273,ENSG00000158683	NA	NA	NA	NA	NA	7p12.3	NA	NA	NA	NA	rs13237611	0.45	0.45	0.459	0.444688	0.4374	0.6548	0.4121	0.2375	0.5389	0.44	0.68	0.37	0.26	0.4503	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.203306	NA	NA	0.467442	0.270086	NA	0.529	NA	2.644858
1388	9	90342675	90342675	C	T	intronic	CTSL1	NA	NA	NA	intronic	ENSG00000135047	NA	NA	NA	NA	NA	9q21.33	NA	NA	NA	NA	rs2274611	0.44	0.44	0.432	0.449081	0.4592	0.3363	0.4135	0.5567	0.4346	0.47	0.33	0.41	0.53	0.449	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.428674	NA	NA	0.447442	0.549024	NA	0.428	NA	2.644358
1388	14	74874540	74874540	A	G	intronic	SYNDIG1L	NA	NA	NA	intronic	ENSG00000183379	NA	NA	NA	NA	NA	14q24.3	NA	NA	NA	NA	rs11621669	0.4	0.4	0.378	0.378994	0.4632	0.3889	0.3818	0.2806	0.4131	0.47	0.41	0.42	0.28	0.4332	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.324241	1.324241	NA	0.459758	0.320763	ID=COSN164737;OCCURENCE=1(NS)	0.355	NA	2.643842
1388	4	156276317	156276317	A	G	intronic	MAP9	NA	NA	NA	ncRNA_intronic	ENSG00000250910	NA	NA	NA	NA	NA	4q32.1	NA	NA	NA	NA	rs2880181	0.74	0.74	0.775	0.739816	0.5616	0.9266	0.5533	0.9546	0.5726	0.58	0.93	0.55	0.93	0.5908	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.091979	NA	NA	0.537294	0.890993	NA	0.623	NA	2.6436393
1388	17	37866005	37866005	C	T	intronic	ERBB2	NA	NA	NA	intronic	ENSG00000141736	NA	NA	NA	NA	NA	17q12	NA	NA	NA	NA	rs1810132	0.59	0.59	0.603	0.583666	0.6889	0.4048	0.5476	0.5756	0.6963	0.7	0.48	0.57	0.55	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.207758	NA	NA	0.667505	0.562139	NA	0.63	NA	2.643595
1388	10	124331944	124331944	C	T	intronic	DMBT1	NA	NA	NA	intronic	ENSG00000187908	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs2277229	0.7	0.7	0.664	0.705671	0.6789	0.7758	0.7882	0.612	0.729	0.69	0.77	0.78	0.58	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.153426	NA	NA	0.677561	0.636561	NA	0.739	NA	2.643539
1388	20	15480548	15480548	T	A	intronic	MACROD2	NA	NA	NA	intronic	ENSG00000172264	NA	NA	NA	NA	NA	20p12.1	NA	NA	NA	NA	rs2145015	0.73	0.73	0.71	0.739018	0.6789	0.9127	0.7997	0.5953	0.773	0.69	0.92	0.75	0.54	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.086119	NA	NA	0.677561	0.601879	NA	0.601	NA	2.643539
1388	15	83521036	83521036	C	T	intronic	HOMER2	NA	NA	NA	intronic	ENSG00000103942	NA	NA	NA	NA	NA	15q25.2	NA	NA	Name=60	NA	rs1256429	0.85	0.85	0.874	0.826877	0.7813	0.8482	0.853	0.9508	0.6656	0.78	0.86	0.84	0.96	0.7929	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.49715	NA	NA	0.782281	0.922657	NA	0.87	NA	2.643519
1388	5	73091228	73091228	C	T	intronic	ARHGEF28	NA	NA	NA	intronic	ENSG00000214944	NA	NA	NA	NA	NA	5q13.2	NA	NA	NA	NA	rs2973548	0.36	0.36	0.365	0.34984	0.4602	0.2768	0.3631	0.2935	0.3783	0.46	0.27	0.36	0.32	0.4304	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.077015	NA	NA	0.465953	0.305465	ID=COSN167490;OCCURENCE=1(large_intestine),1(endometrium)	0.326	NA	2.643447
1388	18	3100429	3100429	G	A	intronic	MYOM1	NA	NA	NA	intronic	ENSG00000101605	NA	NA	NA	NA	NA	18p11.31	NA	NA	NA	NA	rs7232329	0.36	0.36	0.334	0.348043	0.4692	0.3562	0.5331	0.1407	0.364	0.45	0.32	0.54	0.15	0.4422	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.116097	NA	NA	0.447023	0.196216	NA	0.457	NA	2.641577
1388	18	13072979	13072979	T	C	intronic	CEP192	NA	NA	NA	intronic	ENSG00000101639	NA	NA	NA	NA	NA	18p11.21	NA	NA	NA	NA	rs1787013	0.46	0.46	0.466	0.440296	0.4583	0.3571	0.4553	0.5	0.4162	0.47	0.37	0.46	0.54	0.4512	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.441503	1.441503	NA	0.449419	0.501362	NA	0.435	NA	2.641081
1388	19	41711815	41711815	G	A	intronic	CYP2S1	NA	NA	NA	intronic	ENSG00000167600	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs338585	0.53	0.53	0.566	0.548922	0.4404	0.5476	0.3285	0.795	0.4857	0.45	0.52	0.42	0.76	0.4769	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.894336	NA	NA	0.441977	0.731502	NA	0.522	NA	2.640723
1388	1	206944233	206944233	A	G	intronic	IL10	NA	NA	NA	intronic	ENSG00000136634	NA	NA	NA	NA	NA	1q32.1	NA	Name=Pol2,Pol2-4H8,TBP	NA	NA	rs1554286	0.62	0.62	0.583	0.591853	0.8151	0.3393	0.6931	0.5688	0.5818	0.82	0.34	0.69	0.58	0.7169	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.889303	1.889303	NA	0.827442	0.601453	NA	0.659	NA	2.640558
1388	12	125444975	125444975	T	C	intronic	DHX37	NA	NA	NA	intronic	ENSG00000150990	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs4765007	0.59	0.59	0.587	0.566494	0.4245	0.7639	0.4986	0.649	0.4458	0.43	0.79	0.52	0.66	0.4912	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.701487	NA	NA	0.443953	0.602814	NA	0.609	NA	2.640347
1388	19	50140246	50140246	C	A	intronic	RRAS	NA	NA	NA	intronic	ENSG00000126458	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs1865076	0.77	0.77	0.746	0.738219	0.6978	0.8343	0.7954	0.7799	0.5838	0.7	0.86	0.75	0.78	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.048676	NA	NA	0.662162	0.763006	NA	0.783	NA	2.640038
1388	2	15427173	15427173	C	T	intronic	NBAS	NA	NA	NA	intronic	ENSG00000151779	NA	NA	NA	NA	NA	2p24.3	NA	NA	NA	NA	rs4668892	0.65	0.65	0.689	0.667332	0.4215	0.8591	0.5389	0.8313	0.592	0.43	0.84	0.56	0.84	0.5089	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.808518	NA	NA	0.429767	0.741262	NA	0.717	NA	2.639833
1388	22	50693521	50693521	C	T	intronic	MAPK12	NA	NA	NA	intronic	ENSG00000188130	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs5771282	0.68	0.68	0.563	0.777157	0.659	0.7659	0.7622	0.8321	0.8466	0.61	0.71	0.69	0.76	0.7012	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.677749	NA	1	NA	NA	NA	0.254	NA	2.6398
1388	3	45763635	45763635	A	G	intronic	SACM1L	NA	NA	NA	intronic	ENSG00000211456	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs2673062	0.57	0.57	0.553	0.545727	0.6839	0.3839	0.5706	0.6505	0.411	0.7	0.34	0.58	0.62	NA	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.737327	1.737327	NA	0.676304	0.654624	ID=COSN166855;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.507	NA	2.639796
1388	6	168316118	168316118	T	G	intronic	MLLT4	NA	NA	NA	intronic	ENSG00000130396	NA	NA	NA	NA	NA	6q27	NA	NA	NA	NA	rs3213591	0.58	0.58	0.569	0.628195	0.4066	0.7956	0.5778	0.6808	0.6483	0.42	0.78	0.56	0.61	0.5271	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.234475	NA	NA	0.426512	0.63754	NA	0.536	NA	2.639788
1388	11	60107470	60107470	C	A	intronic	MS4A6E	NA	NA	NA	intronic	ENSG00000166926	NA	NA	NA	NA	NA	11q12.2	NA	NA	NA	NA	rs2289612	0.38	0.38	0.394	0.353834	0.4861	0.3948	0.281	0.2625	0.3507	0.48	0.39	0.31	0.27	0.4074	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.271289	NA	NA	0.466977	0.284385	NA	0.493	NA	2.639523
1388	19	15233631	15233631	G	A	intronic	ILVBL	NA	NA	NA	intronic	ENSG00000105135	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs2074266	0.46	0.46	0.45	0.449481	0.4404	0.5635	0.3746	0.3843	0.4826	0.45	0.56	0.39	0.41	0.4547	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.400031	NA	NA	0.465698	0.390604	NA	0.37	NA	2.639202
1388	7	38268395	38268395	C	T	intronic	STARD3NL	NA	NA	NA	intronic	ENSG00000010270	NA	NA	NA	NA	NA	7p14.1	NA	NA	NA	NA	rs7795499	0.44	0.44	0.44	0.435703	0.4473	0.4812	0.4885	0.3192	0.4969	0.43	0.54	0.48	0.32	0.4598	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.243806	NA	NA	0.454524	0.345438	NA	0.377	NA	2.638376
1388	18	57136869	57136869	A	G	intronic	CCBE1	NA	NA	NA	intronic	ENSG00000183287	NA	NA	NA	NA	NA	18q21.32	NA	NA	NA	NA	rs632899	0.41	0.41	0.44	0.432308	0.4453	0.4266	0.3285	0.438	0.4908	0.44	0.42	0.32	0.42	0.453	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.652533	NA	NA	0.46407	0.437358	NA	0.442	NA	2.63763
1388	6	29682400	29682400	G	A	intergenic	ZFP57,HLA-F	dist=37469;dist=8717	NA	NA	intergenic	ENSG00000233916,ENSG00000204642	dist=6076;dist=8152	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs2524272	0.7	0.7	0.689	0.689297	0.6958	0.6915	0.7349	0.6876	0.6503	0.68	0.7	0.71	0.7	NA	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.776506	NA	NA	NA	NA	NA	0.659	NA	2.6375334
1388	17	74090700	74090700	G	A	intronic	EXOC7	NA	NA	NA	intronic	ENSG00000182473	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs2250081	0.47	0.47	0.478	0.534345	0.4423	0.5169	0.3718	0.5946	0.681	0.44	0.47	0.36	0.61	0.4796	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.628099	NA	NA	0.440814	0.582615	NA	0.413	NA	2.637286
1388	12	131485025	131485025	A	G	intronic	GPR133	NA	NA	NA	intronic	ENSG00000111452	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs4759822	0.42	0.42	0.377	0.404752	0.4592	0.2381	0.3775	0.5764	0.3078	0.45	0.23	0.43	0.59	0.4255	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.403263	NA	NA	0.479186	0.55606	NA	0.413	NA	2.636114
1388	19	4498245	4498245	A	G	intronic	HDGFRP2	NA	NA	NA	intronic	ENSG00000167674	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs2288926	0.63	0.63	0.64	0.640775	0.6879	0.4385	0.7003	0.7897	0.5573	0.69	0.42	0.65	0.77	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.627969	NA	NA	0.67599	0.770231	NA	0.71	NA	2.63611
1388	10	134997514	134997514	A	G	intronic	KNDC1	NA	NA	NA	intronic	ENSG00000171798	NA	NA	NA	NA	NA	10q26.3	NA	NA	NA	NA	rs67800134	0.4	0.4	0.339	0.419329	0.4394	0.5823	0.3876	0.118	0.6605	0.46	0.59	0.37	0.11	0.4607	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.722236	NA	NA	0.464186	0.165456	NA	0.377	NA	2.635714
1389	19	46972967	46972967	G	C	intronic	PNMAL1	NA	NA	NA	intronic	ENSG00000182013	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs2288916	0.41	0.41	0.374	0.408147	0.4473	0.4444	0.5476	0.2133	0.4949	0.44	0.46	0.51	0.22	0.4718	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.590111	NA	NA	0.446744	0.233545	NA	0.391	NA	2.634156
1389	9	90313717	90313717	G	T	intronic	DAPK1	NA	NA	NA	intronic	ENSG00000196730	NA	NA	NA	NA	NA	9q21.33	NA	NA	NA	NA	rs3128495	0.37	0.37	0.351	0.348842	0.4583	0.4167	0.5029	0.0522	0.4581	0.47	0.43	0.49	0.07	0.4502	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.372748	NA	NA	0.457447	0.116029	ID=COSM150630,COSM150629;OCCURENCE=1(stomach)	0.355	NA	2.634053
1389	3	69036707	69036707	G	A	intronic	EOGT	NA	NA	NA	intronic	ENSG00000163378	NA	NA	NA	NA	NA	3p14.1	NA	NA	NA	NA	rs4855542	0.38	0.38	0.372	0.360623	0.4642	0.1081	0.4424	0.4909	0.2802	0.45	0.12	0.44	0.51	0.4223	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.017007	NA	NA	0.48	0.515207	NA	0.464	NA	2.6335
1389	7	97937258	97937258	T	C	intronic	BAIAP2L1	NA	NA	NA	intronic	ENSG00000006453	NA	NA	NA	NA	NA	7q21.3	NA	NA	NA	NA	rs6465666	0.32	0.32	0.301	0.264177	0.4751	0.2629	0.3458	0.1399	0.1585	0.47	0.24	0.37	0.16	0.3896	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.979484	NA	NA	0.50186	0.20177	NA	0.232	NA	2.63344
1389	12	44926334	44926334	T	A	intronic	NELL2	NA	NA	NA	intronic	ENSG00000184613	NA	NA	NA	NA	NA	12q12	NA	NA	NA	NA	rs2270479	0.42	0.42	0.39	0.430711	0.4245	0.6716	0.5202	0.1157	0.5511	0.41	0.66	0.49	0.13	0.4807	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.763111	NA	NA	0.461744	0.175443	NA	0.312	NA	2.633056
1389	6	152768796	152768796	T	G	intronic	SYNE1	NA	NA	NA	intronic	ENSG00000131018	NA	NA	NA	NA	NA	6q25.2	NA	NA	NA	NA	rs502268	0.57	0.57	0.601	0.597644	0.4493	0.752	0.3689	0.7663	0.5256	0.44	0.75	0.39	0.72	0.4841	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.231789	NA	NA	0.433822	0.702224	NA	0.594	NA	2.632778
1389	17	74085012	74085012	G	A	intronic	EXOC7	NA	NA	NA	intronic	ENSG00000182473	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs2084666	0.47	0.47	0.461	0.533746	0.4433	0.5169	0.3703	0.593	0.68	0.44	0.47	0.36	0.61	0.4836	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.546359	NA	NA	0.440814	0.579664	NA	0.391	NA	2.632286
1389	7	144703301	144703301	G	A	intergenic	TPK1,CNTNAP2	dist=170155;dist=1110152	NA	NA	downstream	ENSG00000236343	NA	NA	NA	NA	NA	7q35	NA	NA	NA	NA	rs7778697	0.25	0.25	0.249	0.230032	0.3101	0.249	0.1787	0.1982	0.2076	0.31	0.25	0.2	0.17	0.2624	0.31	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.145147	NA	NA	0.295702	0.206958	NA	0.159	NA	2.631798
1389	1	150789961	150789961	A	T	intronic	ARNT	NA	NA	NA	intronic	ENSG00000143437	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs3894771	0.5	0.5	0.524	0.513978	0.4264	0.505	0.4597	0.6082	0.5245	0.42	0.51	0.47	0.64	0.5154	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.1392	NA	NA	0.42656	0.711002	NA	0.283	NA	2.63164
1389	17	74094105	74094105	C	G	intronic	EXOC7	NA	NA	NA	intronic	ENSG00000182473	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs7208391	0.47	0.47	0.488	0.533946	0.4443	0.5129	0.3718	0.5938	0.682	0.44	0.47	0.36	0.61	0.4831	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.268876	NA	NA	0.441395	0.580572	NA	0.399	NA	2.631205
1389	19	58231807	58231807	A	G	UTR3	ZNF671	NM_024833:c.*42T>C	NA	NA	UTR3	ENSG00000083814	ENST00000317398:c.*42T>C,ENST00000600125:c.*1806T>C,ENST00000335820:c.*42T>C,ENST00000601584:c.*1349T>C	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs2239986	0.71	0.71	0.723	0.684505	0.5835	0.7302	0.621	0.9592	0.4151	0.58	0.72	0.64	0.96	0.5829	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.471409	NA	0	0.536628	0.896051	NA	0.696	NA	2.6303054
1389	19	11727503	11727503	T	C	intronic	ZNF627	NA	NA	NA	intronic	ENSG00000198551	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs4545929	0.38	0.38	0.343	0.384585	0.4344	0.3274	0.4856	0.2867	0.453	0.43	0.3	0.48	0.33	0.4644	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.982078	NA	NA	0.471977	0.308986	NA	0.486	NA	2.629223
1389	9	127255448	127255448	G	A	intronic	NR5A1	NA	NA	NA	intronic	ENSG00000136931	NA	NA	NA	NA	NA	9q33.3	NA	NA	NA	NA	rs2297605	0.42	0.42	0.368	0.434305	0.4274	0.4861	0.6254	0.2065	0.5603	0.43	0.51	0.59	0.2	0.4862	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.080524	NA	NA	0.457412	0.22946	NA	0.428	NA	2.628988
1389	16	53476804	53476804	G	A	intronic	RBL2	NA	NA	NA	intronic	ENSG00000103479	NA	NA	NA	NA	NA	16q12.2	NA	NA	NA	NA	rs17800577	0.39	0.39	0.405	0.427316	0.4592	0.1786	0.3718	0.5787	0.4857	0.45	0.15	0.41	0.58	0.4309	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.987882	NA	NA	0.481163	0.558917	NA	0.507	NA	2.628737
1389	9	137672012	137672012	C	T	intronic	COL5A1	NA	NA	NA	intronic	ENSG00000130635	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs3124932	0.3	0.3	0.262	0.287939	0.494	0.0734	0.4697	0.0855	0.4417	0.49	0.07	0.47	0.12	0.4088	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.015817	NA	NA	0.468721	0.144122	ID=COSN168701;OCCURENCE=1(large_intestine)	0.254	NA	2.628479
1389	8	143310815	143310815	G	A	intronic	TSNARE1	NA	NA	NA	intronic	ENSG00000171045	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs11167136	0.49	0.49	0.482	0.535144	0.4314	0.495	0.5735	0.5681	0.6115	0.44	0.51	0.52	0.54	0.4966	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.165811	NA	NA	0.443605	0.530186	NA	0.609	NA	2.628395
1389	8	144643603	144643603	G	A	intronic	GSDMD	NA	NA	NA	intronic	ENSG00000104518	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs2290414	0.49	0.49	0.462	0.498802	0.4304	0.5377	0.549	0.4297	0.5869	0.45	0.58	0.49	0.43	0.5003	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.755034	NA	NA	0.441094	0.462238	NA	0.449	NA	2.628206
1389	20	61527563	61527563	T	C	intronic	DIDO1	NA	NA	NA	intronic	ENSG00000101191	NA	NA	NA	NA	NA	20q13.33	NA	NA	NA	NA	rs2013097	0.49	0.49	0.486	0.503994	0.4334	0.622	0.5144	0.4357	0.5399	0.41	0.61	0.54	0.42	0.4776	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.735431	NA	NA	0.46093	0.423967	NA	0.377	NA	2.62807
1389	21	47558586	47558586	A	G	intronic	FTCD	NA	NA	NA	intronic	ENSG00000160282	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs60525628	0.39	0.39	0.373	0.444289	0.4841	0.2202	0.2997	0.593	0.5358	0.46	0.2	0.33	0.55	0.4464	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.122498	NA	NA	0.441798	0.575308	NA	0.558	NA	2.627702
1389	18	6947143	6947143	A	C	intronic	LAMA1	NA	NA	NA	intronic	ENSG00000101680	NA	NA	NA	NA	NA	18p11.31	NA	NA	NA	NA	rs2155697	0.37	0.37	0.361	0.31889	0.4781	0.2113	0.304	0.3207	0.274	0.48	0.22	0.36	0.36	0.4116	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.057622	NA	NA	0.482907	0.355197	NA	0.326	NA	2.627393
1389	20	61458547	61458547	A	T	intronic	COL9A3	NA	NA	NA	intronic	ENSG00000092758	NA	NA	NA	NA	NA	20q13.33	NA	NA	NA	NA	rs2249766	0.61	0.61	0.587	0.630192	0.4115	0.744	0.5216	0.8268	0.5491	0.42	0.73	0.54	0.8	0.5197	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.481064	NA	NA	0.441512	0.783636	NA	0.565	NA	2.627288
1389	5	94050447	94050447	C	T	intronic	MCTP1	NA	NA	NA	intronic	ENSG00000175471	NA	NA	NA	NA	NA	5q15	NA	NA	NA	NA	rs2638	0.41	0.41	0.371	0.396965	0.4662	0.4345	0.4827	0.1853	0.5123	0.47	0.44	0.52	0.21	0.4512	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.476335	NA	NA	0.455698	0.233545	NA	0.399	NA	2.626902
1389	16	55844609	55844609	G	T	intronic	CES1	NA	NA	NA	intronic	ENSG00000198848	NA	NA	NA	NA	Name=Response to dabigatran etexilate treatment	16q12.2	NA	NA	NA	NA	rs2244613	0.69	0.69	0.666	0.667332	0.839	0.3988	0.7277	0.7511	0.6115	0.85	0.4	0.76	0.75	0.7341	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.218668	NA	NA	0.8	0.761374	NA	0.667	NA	2.6269
1389	17	76481997	76481997	T	C	ncRNA_intronic	LOC100996295	NA	NA	NA	ncRNA_intronic	ENSG00000267432	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs12944880	0.65	0.65	0.597	0.671526	0.6759	0.6667	0.7608	0.5703	0.7454	0.66	0.65	0.77	0.53	0.6878	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.066453	NA	NA	0.676818	0.607448	NA	0.616	NA	2.6261486
1389	11	103270607	103270607	G	A	intronic	DYNC2H1	NA	NA	NA	intronic	ENSG00000187240	NA	NA	NA	NA	NA	11q22.3	NA	NA	NA	NA	rs10895417	0.52	0.52	0.518	0.53774	0.4314	0.5327	0.4957	0.6369	0.5481	0.43	0.53	0.49	0.65	0.4912	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.722256	NA	NA	0.451834	0.621245	NA	0.522	NA	2.625566
1389	12	27059224	27059224	G	A	intronic	ASUN	NA	NA	NA	intronic	ENSG00000064102	NA	NA	NA	NA	NA	12p11.23	NA	Name=MafF_(M8194),MafK_(SC-477),MafK_(ab50322)	NA	NA	rs1488052	0.9	0.9	0.89	0.900359	0.7833	1	0.8818	0.947	0.8681	0.8	1	0.86	0.95	0.8202	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.486047	NA	NA	0.771236	0.917121	NA	0.855	NA	2.625264
1389	10	49654403	49654403	C	T	UTR3	ARHGAP22	NM_001256026:c.*31G>A,NM_001256025:c.*31G>A,NM_001256024:c.*31G>A,NM_021226:c.*31G>A	NA	NA	UTR3	ENSG00000128805	ENST00000249601:c.*31G>A,ENST00000374172:c.*31G>A,ENST00000374170:c.*31G>A,ENST00000477708:c.*31G>A,ENST00000417247:c.*31G>A,ENST00000435790:c.*31G>A,ENST00000417912:c.*31G>A	NA	NA	NA	NA	10q11.22	NA	NA	NA	NA	rs1051507	0.54	0.54	0.53	0.474641	0.6044	0.625	0.4856	0.323	0.3834	0.61	0.63	0.53	0.31	0.5303	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.545579	NA	NA	0.573488	0.360418	NA	0.58	NA	2.6251454
1389	19	10668953	10668953	G	A	intronic	KRI1	NA	NA	NA	intronic	ENSG00000129347	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs875569	0.33	0.33	0.315	0.320487	0.499	0.2401	0.3026	0.1793	0.4233	0.49	0.23	0.36	0.2	0.4068	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.688331	NA	NA	0.46907	0.207444	NA	0.457	NA	2.62513
1390	22	24492061	24492061	T	C	intronic	CABIN1	NA	NA	NA	intronic	ENSG00000099991	NA	NA	NA	NA	NA	22q11.23	NA	NA	Name=10	NA	rs2236622	0.66	0.66	0.63	0.654353	0.7843	0.6062	0.7968	0.4554	0.7382	0.8	0.56	0.82	0.46	0.7697	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.386553	NA	NA	0.821279	0.493645	NA	0.543	NA	2.624721
1390	16	53513055	53513055	T	C	intronic	RBL2	NA	NA	NA	intronic	ENSG00000103479	NA	NA	NA	NA	NA	16q12.2	NA	NA	NA	NA	rs8049033	0.4	0.4	0.405	0.436901	0.4602	0.1786	0.379	0.6104	0.4857	0.45	0.15	0.42	0.59	0.4322	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.205657	2.205657	NA	0.482907	0.568926	NA	0.536	NA	2.624693
1390	19	57027606	57027606	C	T	intronic	ZNF471	NA	NA	NA	intronic	ENSG00000196263	NA	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs10419939	0.4	0.4	0.418	0.380591	0.4891	0.2282	0.3213	0.4259	0.407	0.48	0.24	0.39	0.46	0.4149	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.08656	NA	NA	0.471512	0.457104	NA	0.449	NA	2.624488
1390	15	78401540	78401540	A	C	intronic	CIB2	NA	NA	NA	intronic	ENSG00000136425	NA	NA	NA	NA	NA	15q25.1	NA	NA	NA	NA	rs12592068	NA	NA	NA	0.754593	0.6799	0.8423	0.7565	0.7421	0.7566	NA	NA	NA	NA	0.6957	0.43	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.786302	NA	NA	NA	NA	NA	0.435	NA	2.6244
1390	17	31039255	31039255	T	C	intronic	MYO1D	NA	NA	NA	intronic	ENSG00000176658	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs11080184	0.52	0.52	0.509	0.507388	0.4513	0.7242	0.4568	0.4266	0.4867	0.47	0.72	0.44	0.43	0.4833	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.144135	NA	NA	0.441047	0.410576	NA	0.5	NA	2.624353
1390	19	3750690	3750690	A	C	UTR3	TJP3	NM_001267560:c.*8A>C,NM_001267561:c.*8A>C	NA	NA	UTR3	ENSG00000105289	ENST00000541714:c.*8A>C,ENST00000539908:c.*8A>C,ENST00000382008:c.*8A>C,ENST00000589378:c.*8A>C,ENST00000587686:c.*8A>C,ENST00000586032:c.*381A>C	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs1046278	0.57	0.57	0.519	0.576478	0.5646	0.6399	0.7046	0.4463	0.6084	0.54	0.68	0.68	0.42	0.5922	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.146781	NA	NA	0.552246	0.477056	NA	0.616	NA	2.6242874
1390	19	17179789	17179789	G	A	intronic	HAUS8	NA	NA	NA	intronic	ENSG00000131351	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs2305754	0.66	0.66	0.62	0.702676	0.671	0.4802	0.7882	0.7852	0.7924	0.68	0.47	0.75	0.77	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.373789	NA	NA	0.705053	0.799745	NA	0.688	NA	2.623947
1390	19	10668383	10668383	T	C	intronic	KRI1	NA	NA	NA	intronic	ENSG00000129347	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs3745256	0.32	0.32	0.291	0.316094	0.501	0.2163	0.304	0.1793	0.4223	0.49	0.19	0.36	0.2	0.4056	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.133455	NA	NA	0.470349	0.207444	NA	0.457	NA	2.623051
1390	1	17570466	17570466	T	C	intronic	PADI1	NA	NA	NA	intronic	ENSG00000142623	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs2293921	0.48	0.48	0.475	0.512181	0.4473	0.4425	0.4236	0.5983	0.5971	0.43	0.44	0.44	0.61	0.4834	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.41216	NA	NA	0.446383	0.582879	NA	0.478	NA	2.622917
1390	22	50693554	50693554	A	G	intronic	MAPK12	NA	NA	NA	intronic	ENSG00000188130	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs6010220	0.82	0.82	0.766	0.865415	0.7008	0.8661	0.8213	0.9758	0.9162	0.7	0.86	0.78	0.96	0.6768	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.608115	NA	0.86	NA	NA	NA	0.355	NA	2.6224
1390	12	4881766	4881766	C	T	UTR3	GALNT8	NM_017417:c.*3C>T	NA	NA	UTR3	ENSG00000130035	ENST00000252318:c.*3C>T	NA	NA	NA	NA	12p13.32	NA	NA	NA	NA	rs2286581	0.49	0.49	0.458	0.428115	0.6213	0.3552	0.5245	0.3896	0.2883	0.62	0.37	0.53	0.41	0.5058	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.082186	NA	NA	0.584884	0.460281	NA	0.543	NA	2.6213494
1390	16	84455961	84455961	A	G	intronic	ATP2C2	NA	NA	NA	intronic	ENSG00000064270	NA	NA	NA	NA	NA	16q24.1	NA	NA	NA	NA	rs2288573	0.45	0.45	0.461	0.473243	0.4761	0.2659	0.4539	0.6906	0.4039	0.48	0.23	0.48	0.65	0.4348	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.403056	NA	NA	0.468021	0.683528	NA	0.486	NA	2.621079
1390	3	48505302	48505302	A	G	intronic	ATRIP	NA	NA	NA	intronic	ENSG00000164053	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs6442124	0.39	0.39	0.394	0.388778	0.4821	0.3145	0.3184	0.472	0.3067	0.48	0.29	0.33	0.43	0.4117	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.02392	NA	NA	0.485814	0.467771	NA	0.471	NA	2.620386
1390	12	4881775	4881775	T	C	UTR3	GALNT8	NM_017417:c.*12T>C	NA	NA	UTR3	ENSG00000130035	ENST00000252318:c.*12T>C	NA	NA	NA	NA	12p13.32	NA	NA	NA	NA	rs2286582	0.49	0.49	0.471	0.428115	0.6213	0.3552	0.5245	0.3896	0.2883	0.62	0.37	0.53	0.42	0.5065	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.540644	NA	NA	0.585233	0.460508	NA	0.543	NA	2.6203004
1390	10	82034262	82034262	G	A	intronic	MAT1A	NA	NA	NA	intronic	ENSG00000151224	NA	NA	NA	NA	NA	10q23.1	NA	NA	NA	NA	rs2994388	0.54	0.54	0.564	0.588059	0.4245	0.4861	0.5216	0.7905	0.635	0.42	0.47	0.56	0.78	0.5125	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.151615	NA	NA	0.443023	0.723332	NA	0.601	NA	2.619977
1390	5	118813240	118813240	T	C	intronic	HSD17B4	NA	NA	NA	intronic	ENSG00000133835	NA	NA	NA	NA	NA	5q23.1	NA	NA	NA	NA	rs457106	0.4	0.4	0.346	0.352636	0.4682	0.5466	0.5058	0.0265	0.3661	0.49	0.51	0.49	0.04	0.4442	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.614228	NA	NA	0.468023	0.100363	NA	0.239	NA	2.619577
1390	7	66098482	66098482	G	A	intronic	KCTD7	NA	NA	NA	intronic	ENSG00000243335	NA	NA	NA	NA	NA	7q11.21	NA	NA	NA	NA	rs3764903	0.46	0.46	0.479	0.456869	0.4622	0.2669	0.4524	0.6861	0.3405	0.45	0.24	0.45	0.72	0.448	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.025232	NA	NA	0.470349	0.660009	NA	0.413	NA	2.619451
1390	2	211319824	211319824	T	C	intronic	LANCL1	NA	NA	NA	ncRNA_intronic	ENSG00000234281	NA	NA	NA	NA	NA	2q34	NA	NA	NA	NA	rs2287432	0.69	0.69	0.665	0.71226	0.5437	0.8522	0.7032	0.7776	0.6595	0.55	0.82	0.69	0.75	0.6203	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.573547	NA	NA	0.550349	0.761235	NA	0.536	NA	2.6189843
1390	16	53513033	53513033	C	T	intronic	RBL2	NA	NA	NA	intronic	ENSG00000103479	NA	NA	NA	NA	NA	16q12.2	NA	NA	NA	NA	rs8043918	0.42	0.42	0.415	0.452676	0.4612	0.1786	0.3847	0.6657	0.4867	0.45	0.15	0.42	0.67	0.4374	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.37385	NA	NA	0.48314	0.624886	NA	0.543	NA	2.61826
1390	12	32138924	32138924	T	C	intronic	KIAA1551	NA	NA	NA	intronic	ENSG00000174718	NA	NA	NA	NA	NA	12p11.21	NA	Name=FOXA1_(SC-101058),FOXA2_(SC-6554),FOXA1_(C-20)	NA	NA	rs7302975	0.83	0.83	0.824	0.823482	0.7893	0.8234	0.817	0.8442	0.8354	0.8	0.85	0.81	0.86	0.807	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.391813	NA	NA	0.786113	0.827054	NA	0.761	NA	2.617587
1390	15	57744311	57744311	T	A	intronic	CGNL1	NA	NA	NA	intronic	ENSG00000128849	NA	NA	NA	NA	NA	15q21.3	NA	NA	NA	NA	rs1018269	0.47	0.47	0.464	0.498203	0.4573	0.504	0.5029	0.4486	0.5982	0.44	0.5	0.52	0.43	0.4653	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.313852	NA	NA	0.460275	0.432938	NA	0.457	NA	2.617125
1390	22	45128288	45128288	G	C	intronic	PRR5,PRR5-ARHGAP8	NA	NA	NA	intronic	ENSG00000186654,ENSG00000241484,ENSG00000248405	NA	NA	NA	NA	NA	22q13.31	NA	NA	NA	NA	rs5764979	0.66	0.66	0.629	0.724641	0.4135	0.8849	0.6499	0.8336	0.7853	0.41	0.9	0.61	0.82	0.562	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.660867	NA	NA	0.407895	0.763529	NA	0.63	NA	2.616605
1390	2	219612282	219612282	A	G	intronic	TTLL4	NA	NA	NA	intronic	ENSG00000135912	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs2272188	0.42	0.42	0.436	0.410743	0.4662	0.1409	0.4222	0.6286	0.3292	0.46	0.16	0.42	0.66	0.4425	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.054305	NA	NA	0.474884	0.612574	NA	0.536	NA	2.616416
1390	10	116605103	116605103	A	G	intronic	FAM160B1	NA	NA	NA	intronic	ENSG00000151553	NA	NA	NA	NA	NA	10q25.3	NA	NA	NA	NA	rs2420069	0.35	0.35	0.347	0.353235	0.4662	0.2331	0.3487	0.2549	0.4969	0.48	0.26	0.37	0.25	0.4315	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.245972	NA	NA	0.486163	0.303677	NA	0.471	NA	2.616137
1390	19	7170517	7170517	A	G	intronic	INSR	NA	NA	NA	intronic	ENSG00000171105	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs2860178	0.49	0.49	0.517	0.54972	0.4722	0.3442	0.4035	0.8268	0.5706	0.47	0.28	0.41	0.84	0.4722	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.62993	NA	NA	0.439884	0.740808	NA	0.543	NA	2.615716
1390	8	94061646	94061646	T	C	intergenic	TRIQK,C8orf87	dist=83274;dist=84678	NA	NA	intergenic	ENSG00000205133,ENSG00000254318	dist=31745;dist=84678	NA	NA	NA	NA	8q22.1	NA	NA	NA	NA	rs1504690	0.68	0.68	0.647	0.678315	0.7177	0.7411	0.6614	0.5371	0.7761	0.72	0.75	0.67	0.55	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.50961	NA	NA	NA	NA	NA	0.739	NA	2.6156334
1390	15	41805115	41805115	G	A	intronic	LTK	NA	NA	NA	intronic	ENSG00000062524	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs2253936	0.48	0.48	0.494	0.487819	0.4722	0.3115	0.5115	0.646	0.455	0.48	0.3	0.5	0.68	0.4617	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.044711	3.044711	NA	0.450619	0.607419	NA	0.536	NA	2.615481
1391	4	48541973	48541973	A	G	intronic	FRYL	NA	NA	NA	intronic	ENSG00000075539	NA	NA	NA	NA	NA	4p11	NA	NA	NA	NA	rs17656010	0.44	0.44	0.403	0.381789	0.4851	0.4494	0.5735	0.171	0.3548	0.48	0.5	0.59	0.19	0.4496	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.755186	NA	NA	0.450305	0.20119	NA	0.304	NA	2.614995
1391	1	237755203	237755203	T	C	intronic	RYR2	NA	NA	NA	intronic	ENSG00000198626	NA	NA	NA	NA	NA	1q43	NA	NA	NA	NA	rs2779430	0.37	0.37	0.298	0.33746	0.4911	0.3105	0.5403	0.1437	0.3252	0.48	0.34	0.54	0.11	0.4317	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.500567	NA	NA	0.462394	0.209137	NA	0.399	NA	2.614806
1391	6	13288648	13288648	A	G	intronic	LOC100130357	NA	NA	NA	ncRNA_intronic	ENSG00000215022	NA	NA	NA	NA	NA	6p24.1	NA	NA	NA	NA	rs202038	0.83	0.83	0.838	NA	NA	NA	NA	NA	NA	0.86	0.64	0.88	0.96	0.8506	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.403234	NA	NA	0.868157	0.939498	NA	0.877	NA	2.6145763
1391	21	22910123	22910123	T	G	intronic	NCAM2	NA	NA	NA	intronic	ENSG00000154654	NA	NA	NA	NA	NA	21q21.1	NA	NA	NA	NA	rs9979040	0.41	0.41	0.375	0.388379	0.4732	0.1726	0.4568	0.5287	0.2853	0.48	0.19	0.52	0.49	0.439	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.787934	NA	NA	0.473847	0.514788	NA	0.312	NA	2.613953
1391	9	135702490	135702490	T	C	intronic	AK8	NA	NA	NA	intronic	ENSG00000165695	NA	NA	NA	NA	NA	9q34.13	NA	NA	NA	NA	rs13299768	0.35	0.35	0.271	0.352436	0.4791	0.375	0.428	0.034	0.5757	0.48	0.36	0.43	0.06	0.4375	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.523445	NA	NA	0.469644	0.103949	NA	0.29	NA	2.613756
1391	1	1686943	1686943	T	C	intronic	NADK	NA	NA	NA	intronic	ENSG00000008130	NA	NA	NA	NA	NA	1p36.33	NA	NA	NA	NA	rs2072929	0.38	0.38	0.355	0.353235	0.4751	0.3353	0.3415	0.2723	0.364	0.47	0.34	0.38	0.28	0.4328	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.414898	NA	NA	0.478372	0.303677	NA	0.399	NA	2.613728
1391	7	45144494	45144494	T	C	intronic	TBRG4	NA	NA	NA	intronic	ENSG00000136270	NA	NA	NA	NA	NA	7p13	NA	NA	NA	NA	rs2289376	0.49	0.49	0.503	0.533347	0.4354	0.369	0.4957	0.7179	0.5808	0.44	0.35	0.5	0.74	0.4868	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.395788	NA	NA	0.464842	0.703767	NA	0.587	NA	2.612958
1391	6	101163433	101163433	A	C	intronic	ASCC3	NA	NA	NA	intronic	ENSG00000112249	NA	NA	NA	NA	NA	6q16.3	NA	NA	NA	NA	rs9403997	0.45	0.45	0.395	0.398363	0.4722	0.5248	0.4957	0.2821	0.2802	0.49	0.58	0.46	0.25	0.4646	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.582188	1.582188	NA	0.45028	0.332727	NA	0.406	NA	2.61292
1391	12	31240925	31240925	A	G	intronic	DDX11	NA	NA	NA	intronic	ENSG00000013573	NA	NA	NA	NA	NA	12p11.21	NA	NA	NA	NA	rs7308773	0.63	0.63	0.567	0.632987	0.4314	0.8095	0.6066	0.7088	0.5746	0.43	0.82	0.59	0.75	0.5076	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.709594	NA	NA	0.44814	0.682705	NA	0.522	NA	2.61286
1391	3	10302395	10302395	G	C	intronic	TATDN2	NA	NA	NA	intronic	ENSG00000157014,ENSG00000272410	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs439483	0.65	0.65	0.657	0.699481	0.4324	0.9643	0.4568	0.7443	0.8129	0.42	0.98	0.47	0.77	0.5345	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.002878	NA	NA	0.420915	0.699678	NA	0.688	NA	2.612185
1391	3	179592240	179592240	C	T	intronic	PEX5L	NA	NA	NA	intronic	ENSG00000114757	NA	NA	NA	NA	NA	3q26.33	NA	NA	NA	NA	rs2339914	0.53	0.53	0.487	0.548922	0.4563	0.7917	0.5389	0.3956	0.6084	0.43	0.81	0.49	0.37	0.4983	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.30846	NA	NA	0.434302	0.418293	NA	0.543	NA	2.611098
1391	21	41165566	41165566	T	C	intronic	IGSF5	NA	NA	NA	intronic	ENSG00000183067	NA	NA	NA	NA	NA	21q22.2	NA	NA	NA	NA	rs460504	0.32	0.32	0.278	0.309305	0.4692	0.2143	0.3084	0.2239	0.3589	0.46	0.19	0.33	0.24	0.4165	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.25639	NA	NA	0.503372	0.279619	NA	0.406	NA	2.610928
1391	1	109813020	109813020	G	A	intronic	CELSR2	NA	NA	NA	intronic	ENSG00000143126	NA	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	rs3895559	0.45	0.45	0.476	0.41873	0.4791	0.496	0.4813	0.3313	0.3507	0.46	0.51	0.51	0.33	0.4456	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.148879	NA	NA	0.46593	0.347935	NA	0.384	NA	2.60937
1391	16	1818680	1818680	G	C	intronic	MAPK8IP3	NA	NA	NA	intronic	ENSG00000138834	NA	NA	NA	NA	NA	16p13.3	NA	Name=Pol2-4H8	NA	NA	rs2072989	0.75	0.75	0.743	0.755791	0.7932	0.6091	0.8718	0.8343	0.68	0.79	0.59	0.85	0.79	0.7872	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.533144	NA	NA	0.810251	0.825935	NA	0.783	NA	2.609349
1391	13	101795422	101795422	A	G	intronic	NALCN	NA	NA	NA	intronic	ENSG00000102452	NA	NA	NA	NA	NA	13q33.1	NA	NA	NA	NA	rs661585	0.48	0.48	0.486	0.521765	0.4443	0.501	0.3804	0.6445	0.5573	0.45	0.48	0.39	0.59	0.491	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.937284	NA	NA	0.455581	0.601453	NA	0.507	NA	2.609119
1391	3	145824478	145824478	A	G	intronic	PLOD2	NA	NA	NA	intronic	ENSG00000152952	NA	NA	NA	NA	NA	3q24	NA	NA	NA	NA	rs9289716	0.49	0.49	0.484	0.48103	0.4672	0.5744	0.4597	0.4879	0.4049	0.46	0.56	0.46	0.48	0.4663	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.094388	NA	NA	0.45814	0.504539	NA	0.435	NA	2.60836
1391	10	25140411	25140411	G	C	intronic	PRTFDC1	NA	NA	NA	intronic	ENSG00000099256	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs1326192	0.45	0.45	0.413	0.441094	0.4722	0.506	0.353	0.3374	0.545	0.47	0.51	0.38	0.38	0.4509	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.079886	NA	NA	0.468837	0.359283	NA	0.333	NA	2.608063
1391	4	139544646	139544646	A	T	intergenic	LINC00499,CCRN4L	dist=199148;dist=392297	NA	NA	intergenic	ENSG00000248795,ENSG00000250977	dist=61551;dist=41233	NA	NA	NA	NA	4q31.1	NA	NA	NA	NA	rs6843601	0.76	0.76	0.744	0.773562	0.7256	0.8224	0.6282	0.916	0.683	0.72	0.8	0.63	0.89	NA	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.734992	NA	NA	NA	NA	NA	0.797	NA	2.6077334
1391	2	166611086	166611086	C	T	intronic	GALNT3	NA	NA	NA	intronic	ENSG00000115339	NA	NA	NA	NA	NA	2q24.3	NA	NA	NA	NA	rs41268661	0.36	0.36	0.301	0.321086	0.497	0.3581	0.2882	0.1536	0.3517	0.5	0.35	0.34	0.15	0.4122	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.188626	NA	NA	0.48314	0.213215	ID=COSN166319;OCCURENCE=1(breast)	0.283	NA	2.60766
1391	1	228456147	228456147	T	C	intronic	OBSCN	NA	NA	NA	intronic	ENSG00000154358	NA	NA	NA	NA	NA	1q42.13	NA	NA	NA	NA	rs878388	0.69	0.69	0.656	0.671126	0.671	0.6131	0.6974	0.851	0.4693	0.66	0.6	0.7	0.82	0.7215	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.706881	NA	NA	NA	NA	NA	0.674	NA	2.6075
1391	2	198265173	198265173	T	A	intronic	SF3B1	NA	NA	NA	intronic	ENSG00000115524	NA	NA	NA	NA	NA	2q33.1	NA	NA	NA	NA	rs788017	0.64	0.64	0.733	0.717851	0.7256	0.5169	0.6311	0.8828	0.7556	0.67	0.53	0.57	0.77	0.6669	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.979854	NA	NA	NA	NA	NA	0.696	NA	2.6075
1391	2	1093965	1093965	G	A	intronic	SNTG2	NA	NA	NA	intronic	ENSG00000172554	NA	NA	NA	NA	NA	2p25.3	NA	NA	NA	NA	rs11127460	0.34	0.34	0.318	0.297923	0.4861	0.2837	0.3357	0.1339	0.3139	0.48	0.29	0.4	0.14	0.4176	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.134499	NA	NA	0.488864	0.190399	ID=COSN166000;OCCURENCE=1(breast)	0.246	NA	2.607436
1391	17	49067763	49067763	T	C	intronic	SPAG9	NA	NA	NA	intronic	ENSG00000008294	NA	NA	NA	NA	NA	17q21.33	NA	NA	NA	NA	rs9899816	0.47	0.47	0.476	0.439896	0.4632	0.4246	0.5101	0.4856	0.32	0.45	0.41	0.52	0.53	0.4652	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.590906	NA	NA	0.464302	0.497503	NA	0.449	NA	2.607298
1391	22	19504470	19504470	T	C	intronic	CDC45	NA	NA	NA	intronic	ENSG00000093009	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs2073732	0.64	0.64	0.594	0.655751	0.6869	0.8294	0.7349	0.3215	0.8405	0.69	0.81	0.68	0.33	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.060168	NA	NA	0.705845	0.38078	NA	0.507	NA	2.607255
1391	9	124929211	124929211	A	G	intronic	MORN5	NA	NA	NA	intronic	ENSG00000185681	NA	NA	NA	NA	NA	9q33.2	NA	NA	NA	NA	rs1411444	0.37	0.37	0.356	0.363019	0.4632	0.0615	0.3487	0.5598	0.3149	0.46	0.06	0.4	0.58	0.4387	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.692842	NA	NA	0.491047	0.513845	NA	0.362	NA	2.607053
1391	20	45801319	45801319	T	A	intronic	EYA2	NA	NA	NA	intronic	ENSG00000064655	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs3827049	0.33	0.33	0.329	0.284944	0.502	0.2282	0.3141	0.1377	0.2986	0.52	0.22	0.35	0.13	0.4092	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.518076	NA	NA	0.48186	0.196096	NA	0.377	NA	2.60694
1391	5	52404312	52404312	C	T	intronic	MOCS2	NA	NA	NA	intronic	ENSG00000164172	NA	NA	NA	NA	NA	5q11.2	NA	NA	NA	NA	rs153602	0.45	0.45	0.431	0.438698	0.4563	0.2034	0.4784	0.6127	0.3998	0.45	0.22	0.5	0.66	0.4572	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.398702	NA	NA	0.47976	0.617403	NA	0.333	NA	2.60674
1391	10	121199310	121199310	T	C	intronic	GRK5	NA	NA	NA	intronic	ENSG00000198873	NA	NA	NA	NA	NA	10q26.11	NA	NA	NA	NA	rs1109490	0.33	0.33	0.294	0.325479	0.4712	0.1657	0.4179	0.2549	0.3701	0.47	0.16	0.42	0.24	0.4416	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.462559	NA	NA	0.480698	0.302088	NA	0.428	NA	2.606502
1391	20	2552805	2552805	T	A	intronic	TMC2	NA	NA	NA	intronic	ENSG00000149488	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs1883981	0.38	0.38	0.345	0.342652	0.4105	0.3552	0.4683	0.1135	0.4806	0.46	0.38	0.53	0.14	0.4581	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.437695	NA	NA	0.525465	0.198366	NA	0.384	NA	2.605935
1391	19	15131261	15131261	C	T	intronic	CCDC105	NA	NA	NA	intronic	ENSG00000105143,ENSG00000160994	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs4405675	0.53	0.53	0.489	0.519569	0.4394	0.7034	0.5605	0.4054	0.5378	0.46	0.71	0.55	0.43	0.5083	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.233053	NA	NA	0.446628	0.428507	NA	0.435	NA	2.605672
1392	9	4285986	4285986	G	C	intronic	GLIS3	NA	NA	NA	intronic	ENSG00000107249	NA	NA	NA	NA	NA	9p24.2	NA	NA	NA	NA	rs10758591	0.38	0.38	0.338	0.341254	0.4632	0.502	0.4135	0.0469	0.3967	0.46	0.52	0.43	0.06	0.4459	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.349083	NA	NA	0.485937	0.132991	NA	0.304	NA	2.604963
1392	11	116662579	116662579	C	T	UTR5	APOA5	NM_001166598:c.-3G>A,NM_052968:c.-3G>A	NA	NA	UTR5	ENSG00000110243	ENST00000227665:c.-3G>A,ENST00000542499:c.-3G>A,ENST00000433069:c.-3G>A	NA	NA	NA	Name=Lipid metabolism phenotypes,Triglycerides	11q23.3	NA	NA	NA	NA	rs651821	0.84	0.84	0.836	0.824481	0.9175	0.7123	0.8458	0.8396	0.8088	0.92	0.72	0.87	0.85	0.8799	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.627836	1.627836	NA	0.931331	0.855066	NA	0.913	NA	2.6046024
1392	22	29446975	29446975	T	C	intronic	ZNRF3	NA	NA	NA	intronic	ENSG00000183579	NA	NA	NA	NA	NA	22q12.1	NA	NA	NA	NA	rs6005967	0.44	0.44	0.394	0.398163	0.4751	0.4296	0.5058	0.2837	0.365	0.48	0.45	0.48	0.34	0.4586	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.97721	NA	NA	0.46171	0.305181	NA	0.609	NA	2.60459
1392	9	78842380	78842380	A	G	intronic	PCSK5	NA	NA	NA	intronic	ENSG00000099139	NA	NA	NA	NA	NA	9q21.13	NA	NA	NA	NA	rs1390141	0.35	0.35	0.365	0.388578	0.4573	0.244	0.2882	0.4107	0.5082	0.43	0.23	0.3	0.41	0.4834	0.46	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.436296	NA	NA	0.454751	0.401256	NA	0.37	NA	2.604549
1392	1	205764640	205764640	G	A	intronic	SLC41A1	NA	NA	NA	intronic	ENSG00000133065	NA	NA	NA	NA	Name=Parkinson's disease	1q32.1	NA	NA	NA	NA	rs823156	0.69	0.69	0.655	0.649161	0.8101	0.755	0.7464	0.3381	0.726	0.82	0.78	0.76	0.32	0.7681	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.35133	NA	NA	0.817791	0.423286	NA	0.717	NA	2.604009
1392	7	36366569	36366569	A	T	intronic	KIAA0895	NA	NA	NA	intronic	ENSG00000164542	NA	NA	NA	NA	NA	7p14.2	NA	NA	NA	NA	rs196655	0.44	0.44	0.412	0.458067	0.4563	0.5099	0.4971	0.2534	0.6554	0.47	0.55	0.46	0.25	0.493	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.324695	NA	NA	0.446929	0.303374	NA	0.362	NA	2.603771
1392	11	9370633	9370633	A	G	intergenic	TMEM41B,IPO7	dist=34318;dist=35536	NA	NA	intergenic	ENSG00000166471,ENSG00000205339	dist=34306;dist=35536	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs7938666	0.69	0.69	0.647	0.702077	0.7296	0.8859	0.7839	0.4251	0.8006	0.73	0.86	0.74	0.39	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.171148	NA	NA	NA	NA	NA	0.717	NA	2.6037334
1392	14	23020921	23020921	G	C	intergenic	OR4E2,DAD1	dist=886683;dist=12886	NA	NA	UTR3	ENSG00000229164	ENST00000478163:c.*373G>C	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs3701	0.45	0.45	0.424	0.444489	0.4264	0.7748	0.4481	0.1104	0.5716	0.42	0.8	0.42	0.1	0.4339	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.273114	NA	NA	0.369487	0.133048	NA	NA	NA	2.6035464
1392	12	21628791	21628791	T	C	intronic	RECQL	NA	NA	NA	intronic	ENSG00000004700	NA	NA	NA	NA	NA	12p12.1	NA	NA	NA	NA	rs3752648	0.48	0.48	0.47	0.48742	0.4334	0.5437	0.4798	0.5083	0.4622	0.44	0.54	0.46	0.51	0.4824	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.831447	1.831447	NA	0.480684	0.490921	NA	0.587	NA	2.603516
1392	1	109270402	109270402	G	A	intronic	FNDC7	NA	NA	NA	intronic	ENSG00000143107	NA	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	rs10494096	0.33	0.33	0.348	0.329073	0.4841	0.1865	0.3213	0.2239	0.4642	0.49	0.2	0.36	0.21	0.4333	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.236607	NA	NA	0.479302	0.278938	NA	0.355	NA	2.603298
1392	12	31240960	31240960	G	A	intronic	DDX11	NA	NA	NA	intronic	ENSG00000013573	NA	NA	NA	NA	NA	12p11.21	NA	NA	NA	NA	rs7309189	0.63	0.63	0.629	0.632987	0.4314	0.8095	0.6066	0.7088	0.5746	0.43	0.83	0.59	0.76	0.5144	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.520567	NA	NA	0.451047	0.684975	NA	0.529	NA	2.603153
1392	1	89522512	89522512	C	T	intronic	GBP1	NA	NA	NA	intronic	ENSG00000117228	NA	NA	NA	NA	NA	1p22.2	NA	NA	NA	NA	rs4376712	0.35	0.35	0.312	0.35643	0.4632	0.3581	0.304	0.2005	0.4928	0.46	0.35	0.35	0.18	0.4461	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.446873	NA	NA	0.487555	0.274399	NA	0.225	NA	2.603145
1392	6	20758943	20758943	G	T	intronic	CDKAL1	NA	NA	NA	ncRNA_intronic	ENSG00000233848	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs2820001	0.78	0.78	0.775	0.777556	0.8628	0.6637	0.8156	0.7958	0.7556	0.86	0.63	0.83	0.79	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.429846	NA	NA	0.868008	0.828035	NA	0.754	NA	2.6025253
1392	17	7846684	7846684	G	A	intronic	CNTROB	NA	NA	NA	intronic	ENSG00000170037	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs7207022	0.55	0.55	0.526	0.595447	0.4304	0.8016	0.6398	0.4433	0.727	0.44	0.74	0.57	0.47	0.5322	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.358565	NA	NA	0.435	0.465275	NA	0.522	NA	2.6024
1392	16	20986506	20986506	C	T	intronic	DNAH3	NA	NA	NA	intronic	ENSG00000158486	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs3115438	0.48	0.48	0.483	0.519968	0.4563	0.4821	0.5187	0.5318	0.6094	0.45	0.46	0.49	0.56	0.4911	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.233096	NA	NA	0.450233	0.543844	NA	0.5	NA	2.602367
1392	8	113363511	113363511	T	C	intronic	CSMD3	NA	NA	NA	intronic	ENSG00000164796	NA	NA	NA	NA	NA	8q23.3	NA	NA	NA	NA	rs7003500	0.41	0.41	0.373	0.372204	0.4751	0.4782	0.4568	0.121	0.4366	0.48	0.5	0.5	0.15	0.4474	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.447463	NA	NA	0.475536	0.173933	NA	0.435	NA	2.601964
1392	5	35910419	35910419	C	T	intronic	CAPSL	NA	NA	NA	intronic	ENSG00000152611	NA	NA	NA	NA	NA	5p13.2	NA	NA	NA	NA	rs1445899	0.51	0.51	0.464	0.525359	0.4523	0.7609	0.5937	0.2277	0.7117	0.45	0.8	0.56	0.25	0.502	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.784242	2.784242	NA	0.44394	0.276895	NA	0.522	NA	2.60176
1392	2	10053412	10053412	C	T	intronic	TAF1B	NA	NA	NA	exonic	ENSG00000115750	NA	unknown	UNKNOWN	NA	NA	2p25.1	NA	NA	NA	NA	rs12467598	0.48	0.48	0.45	0.43131	0.6551	0.4514	0.536	0.1301	0.5133	0.64	0.48	0.57	0.15	0.5759	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.889954	NA	NA	0.667907	0.209714	NA	0.536	NA	2.601093
1392	1	110740688	110740688	C	T	intronic	SLC6A17	NA	NA	NA	intronic	ENSG00000197106	NA	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	rs2761445	0.34	0.34	0.318	0.319489	0.4583	0.3056	0.402	0.1399	0.3753	0.47	0.32	0.4	0.12	0.4355	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.624895	NA	NA	0.505465	0.188833	NA	0.399	NA	2.600735
1392	12	56821998	56821998	A	G	intronic	TIMELESS	NA	NA	NA	intronic	ENSG00000111602	NA	NA	NA	NA	NA	12q13.3	NA	NA	NA	NA	rs774026	0.49	0.49	0.409	0.497005	0.4503	0.7371	0.6787	0.2269	0.5337	0.45	0.7	0.6	0.21	0.4955	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.24117	1.24117	NA	0.453605	0.245801	NA	0.493	NA	2.600595
1392	4	88226480	88226480	A	C	intronic	HSD17B13	NA	NA	NA	intronic	ENSG00000170509	NA	NA	NA	NA	NA	4q22.1	NA	NA	NA	NA	rs6850131	0.45	0.45	0.45	0.448682	0.4523	0.3462	0.3588	0.7133	0.2566	0.43	0.34	0.4	0.66	0.4673	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.12194	NA	NA	0.480554	0.671825	NA	0.63	NA	2.599846
1392	12	56815281	56815281	T	C	intronic	TIMELESS	NA	NA	NA	intronic	ENSG00000111602	NA	NA	NA	NA	NA	12q13.3	NA	NA	NA	NA	rs2291738	0.34	0.34	0.343	0.326478	0.4881	0.2827	0.3314	0.143	0.4499	0.49	0.33	0.35	0.13	0.4292	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.374657	NA	NA	0.483372	0.195642	NA	0.333	NA	2.599328
1392	22	50693538	50693538	G	A	intronic	MAPK12	NA	NA	NA	intronic	ENSG00000188130	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs6010219	0.76	0.76	0.602	0.834465	0.6978	0.8651	0.8112	0.8669	0.9162	0.67	0.84	0.73	0.83	0.7029	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.971738	NA	1	NA	NA	NA	0.348	NA	2.5993
1392	2	39993167	39993167	T	C	intronic	THUMPD2	NA	NA	NA	intronic	ENSG00000138050	NA	NA	NA	NA	NA	2p22.1	NA	NA	NA	NA	rs4670959	0.48	0.48	0.445	0.467053	0.4602	0.7282	0.5879	0.1566	0.5389	0.48	0.73	0.56	0.15	0.4902	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.311241	NA	NA	0.450326	0.225828	NA	0.406	NA	2.599274
1392	17	33341834	33341834	T	C	ncRNA_intronic	RAD51L3-RFFL	NA	NA	NA	intronic	ENSG00000092871,ENSG00000267618	NA	NA	NA	NA	NA	17q12	NA	NA	NA	NA	rs2074519	0.59	0.59	0.605	0.609625	0.5726	0.4524	0.4669	0.888	0.5348	0.59	0.4	0.49	0.89	0.5989	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.27261	NA	NA	0.562798	0.834213	NA	0.667	NA	2.5990353
1392	10	124697198	124697198	G	A	intronic	C10orf88	NA	NA	NA	intronic	ENSG00000119965	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs10794580	0.41	0.41	0.411	0.40655	0.492	0.4464	0.3516	0.2973	0.4642	0.5	0.47	0.35	0.25	0.4497	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.152859	NA	NA	0.460689	0.32138	NA	0.413	NA	2.597611
1392	2	15448311	15448311	A	T	intronic	NBAS	NA	NA	NA	intronic	ENSG00000151779	NA	NA	NA	NA	NA	2p24.3	NA	NA	NA	NA	rs1318102	0.63	0.63	0.658	0.668331	0.4334	0.8601	0.549	0.7935	0.6278	0.44	0.84	0.56	0.73	0.5231	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.255601	1.255601	NA	0.446279	0.730141	NA	0.739	NA	2.597221
1392	7	75441111	75441111	G	T	downstream	CCL24	NA	NA	NA	UTR3	ENSG00000106178	ENST00000416943:c.*3C>A,ENST00000222902:c.*3C>A	NA	NA	NA	NA	7q11.23	NA	NA	NA	NA	rs11465314	0.51	0.51	0.51	0.482827	0.4632	0.748	0.4481	0.2421	0.5798	0.45	0.8	0.46	0.28	0.4849	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.137316	NA	NA	0.454767	0.297549	NA	0.551	NA	2.597133
1392	5	161579441	161579441	A	G	intronic	GABRG2	NA	NA	NA	intronic	ENSG00000113327	NA	NA	NA	NA	NA	5q34	NA	NA	NA	NA	rs211013	0.55	0.55	0.576	0.54972	0.4513	0.6944	0.3746	0.6271	0.5215	0.46	0.67	0.39	0.67	0.4858	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.621351	NA	NA	0.466097	0.581143	NA	0.478	NA	2.596803
1392	7	75441108	75441108	C	T	downstream	CCL24	NA	NA	NA	UTR3	ENSG00000106178	ENST00000416943:c.*6G>A,ENST00000222902:c.*6G>A	NA	NA	NA	NA	7q11.23	NA	NA	NA	NA	rs11465315	0.51	0.51	0.522	0.482428	0.4632	0.748	0.4467	0.2413	0.5798	0.45	0.8	0.46	0.28	0.4853	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.281785	NA	NA	0.454767	0.296414	NA	0.551	NA	2.596733
1392	12	31244846	31244846	C	G	intronic	DDX11	NA	NA	NA	intronic	ENSG00000013573	NA	NA	NA	NA	NA	12p11.21	NA	NA	NA	NA	rs1808348	0.63	0.63	0.593	0.635184	0.4394	0.8095	0.611	0.7088	0.5746	0.43	0.81	0.6	0.76	0.5263	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.365909	NA	NA	0.437689	0.667652	NA	0.043	NA	2.596611
1392	19	14139004	14139004	A	G	upstream	RLN3	NA	NA	NA	UTR5	ENSG00000171136	ENST00000431365:c.-13A>G	NA	NA	NA	NA	19p13.12	NA	Name=ZBTB7A_(SC-34508)	NA	NA	rs1982632	0.85	0.85	0.867	0.878994	0.7913	0.8313	0.8991	0.9856	0.8599	0.78	0.83	0.88	0.98	0.8243	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.780837	NA	NA	0.787791	0.952792	NA	0.877	NA	2.596609
1392	8	125072709	125072709	A	G	intronic	FER1L6	NA	NA	NA	ncRNA_exonic	ENSG00000253868	NA	NA	NA	NA	NA	8q24.13	NA	NA	NA	NA	rs13258808	0.81	0.81	0.807	0.807907	0.8708	0.6915	0.7435	0.8699	0.8252	0.86	0.72	0.76	0.87	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.847291	NA	NA	0.866436	0.882225	NA	0.913	NA	2.5960973
1392	8	47768606	47768606	T	A	intergenic	LINC00293,LOC100287846	dist=1199;dist=332324	NA	NA	intergenic	ENSG00000253314,ENSG00000253803	dist=2677;dist=13918	NA	NA	NA	NA	8q11.1	NA	NA	NA	NA	rs10096572	0.78	0.78	0.76	0.748003	0.7376	0.8611	0.8444	0.7489	0.5726	0.74	0.84	0.81	0.74	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.980154	NA	NA	NA	NA	NA	0.79	NA	2.5957334
1392	20	45797883	45797883	C	T	intronic	EYA2	NA	NA	NA	intronic	ENSG00000064655	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs3091653	0.43	0.43	0.386	0.434704	0.4612	0.496	0.5778	0.2148	0.5399	0.44	0.51	0.53	0.22	0.4695	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.201978	NA	NA	0.473721	0.246482	NA	0.341	NA	2.595579
1393	12	104476264	104476264	T	C	intronic	HCFC2	NA	NA	NA	intronic	ENSG00000111727	NA	NA	NA	NA	NA	12q23.3	NA	NA	NA	NA	rs2253274	0.29	0.29	0.258	0.278554	0.508	0.1002	0.4395	0.112	0.3374	0.48	0.1	0.41	0.13	0.4027	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.279046	1.279046	NA	0.494535	0.156832	NA	0.362	NA	2.594765
1393	4	2746285	2746285	A	C	intronic	TNIP2	NA	NA	NA	intronic	ENSG00000168884	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs13145281	0.49	0.49	0.393	0.490815	0.4612	0.4345	0.6398	0.4478	0.5317	0.48	0.46	0.6	0.44	0.5033	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.720014	NA	NA	0.441317	0.430294	ID=COSN167143;OCCURENCE=1(large_intestine)	0.457	NA	2.594183
1393	1	228399482	228399482	C	G	ncRNA_UTR5	OBSCN	NA	NA	NA	UTR5	ENSG00000154358	ENST00000570156:c.-3C>G,ENST00000284548:c.-3C>G,ENST00000366709:c.-71410C>G,ENST00000366707:c.-71410C>G,ENST00000422127:c.-3C>G	NA	NA	NA	NA	1q42.13	NA	NA	NA	NA	rs11804508	0.7	0.7	0.707	0.721046	0.6362	0.8313	0.6427	0.6815	0.8037	0.64	0.83	0.62	0.72	0.657	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.031621	NA	NA	0.612859	0.678775	NA	0.623	NA	2.593941
1393	1	19200908	19200908	G	C	intronic	ALDH4A1	NA	NA	NA	intronic	ENSG00000159423,ENSG00000255275	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs28529092	0.53	0.53	0.504	0.548522	0.4692	0.6637	0.5807	0.4349	0.6421	0.45	0.68	0.52	0.48	0.4943	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.730257	1.730257	NA	0.442791	0.427372	NA	0.536	NA	2.593709
1393	11	118919132	118919132	G	A	intronic	HYOU1	NA	NA	NA	intronic	ENSG00000149428	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs2276060	0.48	0.48	0.467	0.448882	0.4911	0.7282	0.3055	0.202	0.5532	0.49	0.76	0.34	0.23	0.4599	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.916332	NA	NA	0.45553	0.251136	NA	0.435	NA	2.59347
1393	6	497520	497520	G	C	intronic	EXOC2	NA	NA	NA	intronic	ENSG00000112685	NA	NA	NA	NA	NA	6p25.3	NA	NA	NA	NA	rs6909878	0.44	0.44	0.389	0.375998	0.492	0.7123	0.3084	0.0666	0.3763	0.49	0.73	0.37	0.06	0.4305	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.441631	NA	NA	0.484302	0.120064	NA	0.348	NA	2.593198
1393	17	10532884	10532884	G	A	intronic	MYH3	NA	NA	NA	intronic	ENSG00000109063	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs12940161	0.56	0.56	NA	0.514177	0.7654	0.5377	0.6282	0.2398	0.5215	0.75	0.52	0.62	0.27	0.6417	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.807037	NA	NA	NA	NA	NA	0.623	NA	2.5929
1393	1	214826364	214826364	G	A	intronic	CENPF	NA	NA	NA	intronic	ENSG00000117724	NA	NA	NA	NA	NA	1q41	NA	NA	NA	NA	rs335523	0.54	0.54	0.508	0.538339	0.4503	0.8393	0.5504	0.2852	0.6524	0.47	0.88	0.5	0.28	0.5086	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.764278	NA	NA	0.44836	0.317439	NA	0.377	NA	2.59274
1393	19	19032637	19032637	T	C	intronic	DDX49	NA	NA	NA	intronic	ENSG00000105671,ENSG00000268193	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs2231997	0.69	0.69	NA	0.680312	0.7207	0.3393	0.7939	0.9834	0.5	0.71	0.33	0.8	0.98	0.6867	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.120705	NA	NA	NA	NA	NA	0.746	NA	2.5926
1393	10	5246584	5246584	C	A	intronic	AKR1C4	NA	NA	NA	intronic	ENSG00000198610	NA	NA	NA	NA	NA	10p15.1	NA	NA	NA	NA	rs11253042	0.33	0.33	0.303	0.291733	0.5209	0.2599	0.317	0.1369	0.2802	0.51	0.26	0.34	0.15	0.4089	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.793034	NA	NA	0.477649	0.187215	ID=COSN163533;OCCURENCE=1(NS)	0.261	NA	2.592551
1393	10	13230837	13230837	A	G	intronic	MCM10	NA	NA	NA	intronic	ENSG00000065328	NA	NA	NA	NA	NA	10p13	NA	NA	NA	NA	rs6602641	0.36	0.36	0.344	0.369209	0.492	0.1657	0.3631	0.3949	0.4223	0.49	0.14	0.38	0.42	0.4258	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.742886	NA	NA	0.489651	0.429187	NA	0.377	NA	2.592549
1393	2	241492255	241492255	G	T	intronic	ANKMY1	NA	NA	NA	intronic	ENSG00000144504	NA	NA	NA	NA	NA	2q37.3	NA	NA	NA	NA	rs4676428	0.71	0.71	0.719	0.725839	0.6968	0.8214	0.6037	0.6528	0.8425	0.71	0.83	0.62	0.66	0.7112	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.497358	NA	NA	NA	NA	NA	0.775	NA	2.592
1393	3	52814256	52814256	T	A	intronic	ITIH1	NA	NA	NA	intronic	ENSG00000055957	NA	NA	NA	NA	NA	3p21.1	NA	NA	NA	NA	rs2302417	0.45	0.45	0.288	0.388578	0.5129	0.4087	0.562	0.2292	0.3323	0.51	0.46	0.59	0.26	0.4716	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.961813	NA	NA	0.424563	0.216216	NA	0.254	NA	2.590937
1393	7	577651	577651	C	T	intergenic	FLJ44511,PRKAR1B	dist=12782;dist=11183	NA	NA	intergenic	ENSG00000223855,ENSG00000188191	dist=12782;dist=11183	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs9719862	0.68	0.68	0.684	0.67472	0.7425	0.8185	0.7695	0.3442	0.8364	0.75	0.81	0.74	0.38	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.294614	NA	NA	NA	NA	NA	0.572	NA	2.5908334
1393	6	43401105	43401105	G	A	intronic	ABCC10	NA	NA	NA	intronic	ENSG00000124574	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs9394952	0.4	0.4	0.355	0.364018	0.4612	0.5853	0.4409	0.0287	0.4346	0.47	0.59	0.43	0.03	0.4764	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.089004	NA	NA	0.472442	0.103495	NA	0.275	NA	2.589958
1393	17	38905477	38905477	T	G	intronic	KRT25	NA	NA	NA	intronic	ENSG00000204897	NA	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs10491127	0.5	0.5	0.499	0.500998	0.4493	0.7292	0.4107	0.3964	0.5245	0.46	0.71	0.42	0.37	0.4887	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.457867	NA	NA	0.472209	0.401044	NA	0.406	NA	2.589791
1393	4	122258063	122258063	A	G	intronic	QRFPR	NA	NA	NA	intronic	ENSG00000186867	NA	NA	NA	NA	NA	4q27	NA	NA	NA	NA	rs4490481	0.47	0.47	0.429	0.478834	0.4682	0.7272	0.5605	0.1808	0.5787	0.46	0.71	0.53	0.16	0.4779	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.029468	NA	NA	0.464302	0.236723	NA	0.312	NA	2.589598
1393	12	10312648	10312648	C	A	intronic	OLR1	NA	NA	NA	intronic	ENSG00000173391	NA	NA	NA	NA	NA	12p13.2	NA	NA	NA	NA	rs13306593	0.35	0.35	0.293	0.31869	0.5109	0.2381	0.5403	0.1732	0.2434	0.5	0.23	0.48	0.15	0.4232	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.214782	NA	NA	0.476512	0.222197	NA	0.355	NA	2.589388
1393	1	207143422	207143422	A	G	intronic	FCAMR	NA	NA	NA	intronic	ENSG00000162897	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs1856746	0.56	0.56	0.591	0.55012	0.4702	0.4425	0.5101	0.9319	0.2556	0.45	0.41	0.56	0.92	0.4725	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.731688	NA	NA	0.468035	0.853954	NA	0.717	NA	2.589265
1393	4	6602516	6602516	A	G	intronic	MAN2B2	NA	NA	NA	intronic	ENSG00000013288	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs12639813	0.52	0.52	0.505	0.520966	0.4523	0.6161	0.513	0.5333	0.4826	0.46	0.62	0.5	0.51	0.4894	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.180329	NA	NA	0.46907	0.533364	NA	0.428	NA	2.58923
1393	16	28922149	28922149	C	T	intronic	RABEP2	NA	NA	NA	intronic	ENSG00000177548	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs11646653	0.76	0.76	0.784	0.754992	0.7157	0.874	0.5288	0.7723	0.8098	0.71	0.87	0.63	0.79	0.6952	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.488289	NA	NA	NA	NA	NA	0.848	NA	2.5891
1393	17	6483046	6483046	T	C	UTR3	KIAA0753	NM_014804:c.*21A>G	NA	NA	UTR3	ENSG00000198920	ENST00000361413:c.*21A>G,ENST00000542606:c.*21A>G,ENST00000570790:c.*2071A>G,ENST00000572370:c.*21A>G,ENST00000589033:c.*21A>G,ENST00000542826:c.*1363A>G	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs3744720	0.66	0.66	0.663	0.689097	0.5467	0.7093	0.6801	0.8253	0.637	0.53	0.68	0.67	0.82	0.6228	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.657436	2.657436	NA	0.574747	0.782077	NA	0.812	NA	2.5890864
1393	19	56372705	56372705	C	T	intronic	NLRP4	NA	NA	NA	intronic	ENSG00000160505	NA	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs4801635	0.51	0.51	0.517	0.51278	0.4811	0.6448	0.5274	0.407	0.5419	0.45	0.67	0.49	0.41	0.4773	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.059303	NA	NA	0.452791	0.396051	NA	0.565	NA	2.588809
1393	2	98177124	98177124	T	G	intronic	ANKRD36B	NA	NA	NA	ncRNA_intronic	ENSG00000196912	NA	NA	NA	NA	NA	2q11.2	NA	NA	NA	NA	rs11681640	0.35	0.35	0.3	0.297923	0.6402	0.2331	0.415	0.1036	0.1922	0.53	0.26	0.43	0.11	0.4953	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.684463	NA	NA	0.609347	0.189767	NA	NA	NA	2.5884863
1393	22	41244398	41244398	C	G	intronic	ST13	NA	NA	NA	intronic	ENSG00000100380	NA	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs138344	0.38	0.38	0.339	0.397364	0.4781	0.0605	0.6859	0.3563	0.5123	0.5	0.07	0.68	0.35	0.4674	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.93694	NA	NA	0.466163	0.369042	NA	0.435	NA	2.588337
1393	1	151026815	151026815	C	T	intronic	CDC42SE1	NA	NA	NA	intronic	ENSG00000197622	NA	NA	NA	NA	NA	1q21.3	NA	Name=Pol2-4H8	NA	NA	rs2902810	0.8	0.8	0.797	0.801917	0.8062	0.9058	0.8098	0.6884	0.8384	0.8	0.91	0.82	0.67	0.8061	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.803917	NA	NA	0.799535	0.699955	NA	0.739	NA	2.588165
1393	9	27455095	27455095	G	C	intronic	MOB3B	NA	NA	NA	intronic	ENSG00000120162	NA	NA	NA	NA	NA	9p21.2	NA	NA	NA	NA	rs12379154	0.42	0.42	0.401	0.417931	0.4722	0.5764	0.4784	0.1415	0.5297	0.46	0.58	0.46	0.15	0.4638	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.035826	NA	NA	0.47593	0.181571	NA	0.355	NA	2.58807
1393	3	111658290	111658290	T	G	intronic	PHLDB2	NA	NA	NA	intronic	ENSG00000144824	NA	NA	NA	NA	NA	3q13.2	NA	NA	NA	NA	rs712509	0.59	0.59	0.591	0.613019	0.4722	0.7659	0.5519	0.6452	0.6002	0.48	0.76	0.49	0.63	0.5118	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.200185	NA	NA	0.428488	0.613482	NA	0.58	NA	2.587512
1393	1	203709034	203709034	A	G	UTR3	ATP2B4	NM_001684:c.*52A>G,NM_001001396:c.*335A>G	NA	NA	UTR3	ENSG00000058668	ENST00000357681:c.*52A>G,ENST00000391954:c.*335A>G,ENST00000367219:c.*335A>G,ENST00000367218:c.*335A>G,ENST00000341360:c.*335A>G,ENST00000484746:c.*215A>G	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs955865	0.61	0.61	0.596	0.600639	0.5805	0.499	0.7334	0.6694	0.5389	0.59	0.52	0.72	0.67	0.5835	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.64921	NA	NA	0.581854	0.675961	NA	0.543	NA	2.5874794
1393	15	75650972	75650972	G	A	intronic	MAN2C1	NA	NA	NA	intronic	ENSG00000140400	NA	NA	NA	NA	NA	15q24.2	NA	NA	NA	NA	rs3809549	0.39	0.39	0.328	0.396366	0.4692	0.4792	0.4366	0.1483	0.5429	0.48	0.44	0.43	0.15	0.4729	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.418139	NA	NA	0.470424	0.208694	NA	0.493	NA	2.587476
1393	14	91937143	91937143	G	A	intronic	SMEK1	NA	NA	NA	intronic	ENSG00000100796	NA	NA	NA	NA	NA	14q32.12	NA	NA	NA	NA	rs10873409	0.52	0.52	0.5	0.492013	0.4751	0.5149	0.5029	0.5265	0.4315	0.5	0.52	0.49	0.57	0.4926	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.38113	NA	NA	0.44593	0.509759	NA	0.478	NA	2.58637
1393	16	74999625	74999625	A	T	intronic	WDR59	NA	NA	NA	intronic	ENSG00000103091	NA	NA	NA	NA	NA	16q23.1	NA	NA	NA	NA	rs4887796	0.63	0.63	0.618	0.644968	0.4404	0.756	0.5591	0.7716	0.6309	0.45	0.78	0.55	0.79	0.5309	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.217537	NA	NA	0.442791	0.715196	NA	0.623	NA	2.585909
1393	1	154557685	154557685	C	T	intronic	ADAR	NA	NA	NA	intronic	ENSG00000160710	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs9427094	0.41	0.41	0.367	0.388778	0.4712	0.499	0.4769	0.1997	0.3834	0.47	0.49	0.48	0.19	0.463	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.955701	NA	NA	0.480698	0.251929	NA	0.377	NA	2.585102
1393	14	91927717	91927717	G	A	intronic	SMEK1	NA	NA	NA	intronic	ENSG00000100796	NA	NA	NA	NA	NA	14q32.12	NA	NA	NA	NA	rs8006817	0.52	0.52	0.477	0.491414	0.4761	0.5149	0.4957	0.5265	0.4325	0.5	0.52	0.48	0.57	0.4931	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.751116	NA	NA	0.445698	0.509305	NA	0.478	NA	2.585102
1393	17	49713205	49713205	G	T	intronic	CA10	NA	NA	NA	intronic	ENSG00000154975	NA	NA	NA	NA	NA	17q21.33	NA	NA	NA	NA	rs10514986	0.38	0.38	0.383	0.359824	0.4901	0.3234	0.4496	0.2481	0.3507	0.49	0.31	0.46	0.23	0.4414	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.653264	2.653264	NA	0.483488	0.278938	ID=COSN165467;OCCURENCE=1(breast)	0.428	NA	2.585012
1394	8	76472560	76472560	A	T	intronic	HNF4G	NA	NA	NA	intronic	ENSG00000164749	NA	NA	NA	NA	NA	8q21.11	NA	NA	NA	NA	rs2941473	0.52	0.52	0.525	0.498203	0.4722	0.3214	0.3775	0.7753	0.4182	0.49	0.37	0.4	0.83	0.4676	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.724522	NA	NA	0.47593	0.745574	NA	0.522	NA	2.58427
1394	2	61007782	61007782	A	G	intronic	PAPOLG	NA	NA	NA	intronic	ENSG00000115421	NA	NA	NA	NA	NA	2p16.1	NA	NA	NA	NA	rs10496089	0.69	0.69	0.669	0.698882	0.7117	0.5675	0.683	0.7231	0.7996	0.72	0.59	0.74	0.72	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.588281	NA	NA	0.704588	0.747832	NA	0.761	NA	2.583712
1394	1	5948677	5948677	G	A	intronic	NPHP4	NA	NA	NA	intronic	ENSG00000131697	NA	NA	NA	NA	NA	1p36.31	NA	Name=CTCF	NA	NA	rs2282281	0.83	0.83	0.871	0.833866	0.8151	0.8413	0.7522	0.969	0.7209	0.81	0.83	0.72	0.95	0.7974	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.846168	NA	NA	0.804119	0.930365	NA	0.848	NA	2.583381
1394	7	134890855	134890855	T	G	intronic	WDR91	NA	NA	NA	intronic	ENSG00000105875	NA	NA	NA	NA	NA	7q33	NA	NA	NA	NA	rs292593	0.6	0.6	0.571	NA	NA	NA	NA	NA	NA	0.72	0.59	0.78	0.31	0.6931	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.986219	NA	NA	0.723721	0.318656	NA	0.652	NA	2.583179
1394	20	31374259	31374259	C	T	intronic	DNMT3B	NA	NA	NA	intronic	ENSG00000088305	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs2424913	0.66	0.66	0.619	0.688099	0.4125	0.9931	0.6398	0.6747	0.7096	0.42	0.99	0.61	0.65	0.5576	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.858654	NA	NA	0.44694	0.627157	NA	0.507	NA	2.58296
1394	3	100992385	100992385	C	T	intronic	IMPG2	NA	NA	NA	intronic	ENSG00000081148	NA	NA	NA	NA	NA	3q12.3	NA	NA	NA	NA	rs348866	0.37	0.37	0.356	0.358027	0.5149	0.3482	0.402	0.1891	0.4039	0.52	0.34	0.38	0.18	0.4262	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.257696	NA	NA	0.476395	0.256015	NA	0.333	NA	2.582505
1394	12	105446719	105446719	G	T	intronic	ALDH1L2	NA	NA	NA	intronic	ENSG00000136010	NA	NA	NA	NA	NA	12q23.3	NA	NA	NA	NA	rs56118650	0.36	0.36	0.319	0.359824	0.499	0.3899	0.353	0.1354	0.4939	0.5	0.37	0.4	0.13	0.4349	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.025335	NA	NA	0.484302	0.193373	ID=COSM147599;OCCURENCE=1(stomach)	0.435	NA	2.581798
1394	5	149631413	149631413	A	G	intronic	CAMK2A	NA	NA	NA	intronic	ENSG00000070808	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs2288799	0.58	0.58	0.594	0.601438	0.4453	0.6002	0.4524	0.8207	0.5726	0.45	0.61	0.49	0.81	0.5161	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.311122	1.311122	NA	0.457295	0.782779	NA	0.681	NA	2.581305
1394	4	39279724	39279724	T	C	intronic	WDR19	NA	NA	NA	intronic	ENSG00000157796	NA	NA	NA	NA	NA	4p14	NA	NA	NA	NA	rs12648082	0.47	0.47	0.479	0.489417	0.4573	0.379	0.3775	0.7663	0.3415	0.44	0.36	0.36	0.73	0.521	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.748179	1.748179	NA	0.440738	0.711746	NA	0.529	NA	2.580962
1394	2	86258784	86258784	T	G	intronic	POLR1A	NA	NA	NA	intronic	ENSG00000068654	NA	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs2278536	0.26	0.26	0.25	0.237819	0.4861	0.1151	0.2853	0.0265	0.3609	0.47	0.13	0.35	0.04	0.4149	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.916047	NA	NA	0.518364	0.091787	ID=COSN166158;OCCURENCE=1(breast)	0.319	NA	2.580636
1394	6	7879407	7879407	T	C	intronic	BMP6	NA	NA	NA	intronic	ENSG00000153162	NA	NA	NA	NA	NA	6p24.3	NA	NA	NA	NA	rs267172	0.65	0.65	0.657	0.647364	0.4523	0.8313	0.6225	0.7806	0.4959	0.46	0.82	0.59	0.8	0.5273	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.497477	NA	NA	0.440698	0.72719	NA	0.739	NA	2.579702
1394	12	21644667	21644667	G	A	intronic	RECQL	NA	NA	NA	intronic	ENSG00000004700	NA	NA	NA	NA	NA	12p12.1	NA	NA	NA	NA	rs10841834	0.4	0.4	0.374	0.373203	0.493	0.4623	0.3963	0.1248	0.4775	0.49	0.48	0.42	0.14	0.4692	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.057033	NA	NA	0.45813	0.188153	ID=COSN164190;OCCURENCE=1(NS)	0.239	NA	2.57967
1394	12	8759445	8759445	C	T	intronic	AICDA	NA	NA	NA	intronic	ENSG00000111732	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs2518144	0.62	0.62	0.643	0.632588	0.4414	0.7808	0.4841	0.7685	0.5982	0.46	0.82	0.48	0.73	0.5323	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.919493	NA	NA	0.446803	0.739075	NA	0.471	NA	2.579497
1394	6	169629783	169629783	G	A	intronic	THBS2	NA	NA	NA	ncRNA_intronic	ENSG00000226445	NA	NA	NA	NA	NA	6q27	NA	NA	NA	NA	rs6422747	0.67	0.67	0.671	0.701877	0.5606	0.6131	0.6686	0.9652	0.6063	0.56	0.58	0.66	0.95	0.6122	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.654945	NA	NA	0.581047	0.902406	ID=COSM150222;OCCURENCE=1(stomach)	0.754	NA	2.5794863
1394	10	81060474	81060474	T	C	intronic	ZMIZ1	NA	NA	NA	intronic	ENSG00000108175	NA	NA	NA	NA	NA	10q22.3	NA	NA	NA	NA	rs1250549	0.56	0.56	0.522	0.590056	0.4324	0.6944	0.451	0.7209	0.5665	0.42	0.73	0.46	0.65	0.5229	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.960749	NA	NA	0.465349	0.655838	NA	0.457	NA	2.579351
1394	19	14975471	14975471	C	T	intergenic	OR7A10,OR7A17	dist=22782;dist=15767	NA	NA	ncRNA_exonic	ENSG00000172148	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs11085912	0.76	0.76	0.77	0.765974	0.6869	0.9435	0.683	0.7375	0.7618	0.71	0.91	0.67	0.72	0.7345	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.709935	NA	NA	NA	NA	NA	0.812	NA	2.5786
1394	8	113308243	113308243	A	G	intronic	CSMD3	NA	NA	NA	intronic	ENSG00000164796	NA	NA	NA	NA	NA	8q23.3	NA	NA	NA	NA	rs4876462	0.43	0.43	0.403	0.408746	0.4791	0.4435	0.4712	0.2723	0.4407	0.48	0.47	0.51	0.27	0.4625	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.41259	NA	NA	0.48	0.294825	NA	0.428	NA	2.5784
1394	6	74528293	74528293	A	G	intronic	CD109	NA	NA	NA	intronic	ENSG00000156535	NA	NA	NA	NA	NA	6q13	NA	NA	NA	NA	rs3005506	0.44	0.44	0.407	0.434505	0.4881	0.4593	0.4755	0.2958	0.5123	0.51	0.47	0.45	0.32	0.4632	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.213659	NA	NA	0.470814	0.332274	NA	0.493	NA	2.577886
1394	5	7695845	7695845	C	A	intronic	ADCY2	NA	NA	NA	intronic	ENSG00000078295	NA	NA	NA	NA	NA	5p15.31	NA	NA	NA	NA	rs11134251	0.58	0.58	0.588	0.596645	0.4443	0.8343	0.4135	0.5734	0.6697	0.46	0.81	0.45	0.59	0.5254	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.600884	NA	NA	0.452442	0.562415	NA	0.572	NA	2.577858
1394	14	68042496	68042496	A	G	intronic	PLEKHH1	NA	NA	NA	intronic	ENSG00000054690	NA	NA	NA	NA	NA	14q24.1	NA	Name=CTCF	NA	NA	rs4902491	0.74	0.74	0.706	0.72484	0.8131	0.624	0.8386	0.6475	0.7618	0.81	0.67	0.84	0.64	0.8	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.22314	NA	NA	0.809176	0.698606	NA	0.804	NA	2.577724
1394	3	41942199	41942199	T	C	intronic	ULK4	NA	NA	NA	intronic	ENSG00000168038	NA	NA	NA	NA	NA	3p22.1	NA	NA	Name=79	NA	rs1717007	0.7	0.7	0.669	0.681909	0.8101	0.8532	0.8141	0.2814	0.8211	0.8	0.85	0.81	0.29	0.7871	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.018221	NA	NA	0.825457	0.354502	NA	0.645	NA	2.577343
1394	6	170159023	170159023	G	A	intronic	C6orf70	NA	NA	NA	intronic	ENSG00000130023	NA	NA	NA	NA	NA	6q27	NA	NA	NA	NA	rs6459660	0.73	0.73	0.752	0.747204	0.4563	0.9821	0.7003	0.9175	0.6074	0.47	0.98	0.66	0.9	0.5521	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.591186	NA	NA	0.414535	0.83931	NA	0.717	NA	2.577065
1394	3	183896641	183896641	T	C	intronic	AP2M1	NA	NA	NA	intronic	ENSG00000145191,ENSG00000161203	NA	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs2231216	0.41	0.41	0.362	0.419329	0.4692	0.5655	0.3833	0.1808	0.5654	0.46	0.57	0.38	0.16	0.4673	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.511409	1.511409	NA	0.486509	0.223167	NA	0.341	NA	2.576991
1394	3	39701165	39701165	A	G	intergenic	MOBP,MYRIP	dist=143671;dist=150138	NA	NA	intergenic	ENSG00000230757,ENSG00000170011	dist=14969;dist=149240	NA	NA	NA	NA	3p22.1	NA	NA	NA	NA	rs12107784	0.74	0.74	0.686	0.719649	0.7565	0.878	0.7594	0.5166	0.7648	0.78	0.87	0.75	0.53	NA	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.898102	NA	NA	NA	NA	NA	0.623	NA	2.5768334
1394	5	102537200	102537200	T	G	intronic	PPIP5K2	NA	NA	NA	intronic	ENSG00000145725	NA	NA	NA	NA	NA	5q21.1	NA	NA	NA	NA	rs154290	0.43	0.43	0.381	0.347843	0.4871	0.6002	0.389	0.118	0.226	0.49	0.58	0.45	0.12	0.4379	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.815615	NA	NA	0.498487	0.166515	NA	0.312	NA	2.576513
1394	12	31254752	31254752	C	T	intronic	DDX11	NA	NA	NA	intronic	ENSG00000013573	NA	NA	NA	NA	NA	12p11.21	NA	NA	NA	NA	rs7966272	0.63	0.63	0.619	0.634585	0.4394	0.8075	0.6124	0.708	0.5736	0.44	0.82	0.6	0.75	0.5268	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.644	NA	NA	0.45731	0.692568	NA	0.312	NA	2.57649
1394	22	35478688	35478688	C	T	intronic	ISX	NA	NA	NA	intronic	ENSG00000175329	NA	NA	NA	NA	NA	22q12.3	NA	NA	NA	NA	rs725267	0.36	0.36	0.356	0.339058	0.4891	0.1488	0.4726	0.3812	0.229	0.46	0.15	0.45	0.38	0.4246	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.505973	NA	NA	0.51	0.406718	NA	0.587	NA	2.5763
1394	16	19553183	19553183	T	C	intronic	CCP110	NA	NA	NA	intronic	ENSG00000103540	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs17325092	0.25	0.25	0.214	0.192093	0.507	0.0357	0.2565	0.0234	0.2117	0.52	0.04	0.28	0.03	0.3992	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.475133	2.475133	NA	0.517907	0.101957	NA	0.167	NA	2.575893
1394	22	22786410	22786410	C	T	intergenic	LOC96610,ZNF280B	dist=109086;dist=52362	NA	NA	intronic	ENSG00000211655	NA	NA	NA	NA	NA	22q11.22	NA	NA	NA	NA	rs165657	0.4	0.4	0.349	0.342851	0.5577	0.3452	0.5288	0.0953	0.3221	0.56	0.35	0.51	0.12	0.5331	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.191856	NA	NA	NA	NA	NA	0.312	NA	2.5758667
1394	9	112629858	112629858	A	G	intronic	PALM2,PALM2-AKAP2	NA	NA	NA	intronic	ENSG00000157654,ENSG00000241978,ENSG00000243444	NA	NA	NA	NA	NA	9q31.3	Score=808;Name=V$FREAC4_01	NA	NA	NA	rs2769154	0.9	0.9	0.881	0.905351	0.7773	0.9593	0.8948	0.9735	0.8967	0.8	0.97	0.88	0.97	0.8507	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.671203	1.671203	NA	0.796395	0.948933	NA	0.935	NA	2.575605
1394	12	21615664	21615664	T	C	intronic	PYROXD1	NA	NA	NA	intronic	ENSG00000121350	NA	NA	NA	NA	NA	12p12.1	NA	NA	NA	NA	rs3782660	0.48	0.48	0.459	0.476038	0.4483	0.5268	0.4841	0.4955	0.4202	0.44	0.52	0.48	0.5	0.4805	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.803733	NA	NA	0.496163	0.488652	NA	0.536	NA	2.575037
1395	1	237755188	237755188	C	T	intronic	RYR2	NA	NA	NA	intronic	ENSG00000198626	NA	NA	NA	NA	NA	1q43	NA	NA	NA	NA	rs2618713	0.37	0.37	0.307	0.335863	0.4911	0.3105	0.5403	0.1437	0.317	0.48	0.34	0.54	0.11	0.4598	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.066942	NA	NA	0.474818	0.201862	NA	0.399	NA	2.574282
1395	10	3146180	3146180	C	T	intronic	PFKP	NA	NA	NA	intronic	ENSG00000067057	NA	NA	NA	NA	NA	10p15.2	NA	NA	NA	NA	rs2306294	0.51	0.51	0.525	0.540535	0.4672	0.4494	0.4683	0.7481	0.4806	0.46	0.42	0.47	0.71	0.504	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.38374	NA	NA	0.454736	0.684462	NA	0.464	NA	2.574064
1395	1	157811392	157811392	G	A	intronic	CD5L	NA	NA	NA	intronic	ENSG00000073754	NA	NA	NA	NA	NA	1q23.1	NA	NA	NA	NA	rs2260040	0.76	0.76	0.76	0.788738	0.7187	0.8095	0.7522	0.7912	0.862	0.72	0.81	0.72	0.81	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.369874	NA	NA	0.707731	0.734827	NA	0.841	NA	2.573569
1395	12	21613923	21613923	T	C	intronic	PYROXD1	NA	NA	NA	intronic	ENSG00000121350	NA	NA	NA	NA	NA	12p12.1	NA	NA	NA	NA	rs7309539	0.48	0.48	0.47	0.476038	0.4483	0.5268	0.4841	0.4955	0.4202	0.44	0.52	0.48	0.5	0.4851	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.384415	NA	NA	0.493321	0.487677	NA	0.529	NA	2.573279
1395	20	5935385	5935385	T	C	intronic	MCM8	NA	NA	NA	intronic	ENSG00000125885	NA	NA	NA	NA	Name=Menopause (age at onset)	20p12.3	NA	NA	NA	NA	rs236114	0.89	0.89	0.91	0.883586	0.8062	0.998	0.8559	0.9266	0.8067	0.82	1	0.8	0.95	0.835	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.430205	NA	NA	0.785814	0.912165	NA	0.877	NA	2.572986
1395	6	564515	564515	G	T	intronic	EXOC2	NA	NA	NA	intronic	ENSG00000112685	NA	NA	NA	NA	NA	6p25.3	NA	NA	NA	NA	rs2277096	0.4	0.4	0.35	0.422125	0.499	0.3859	0.6023	0.1074	0.6779	0.48	0.41	0.56	0.14	0.4629	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.022682	NA	NA	0.465465	0.136405	NA	0.478	NA	2.572635
1395	7	87179143	87179143	A	G	intronic	ABCB1	NA	NA	NA	intronic	ENSG00000085563	NA	NA	NA	NA	NA	7q21.12	NA	NA	NA	NA	rs2235033	0.46	0.46	0.443	0.465056	0.493	0.375	0.5461	0.5151	0.4039	0.48	0.35	0.51	0.51	0.4615	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.231094	NA	NA	0.472907	0.444167	ID=COSN168136;OCCURENCE=1(large_intestine)	0.464	NA	2.572593
1395	4	108868515	108868515	T	C	intronic	CYP2U1	NA	NA	NA	ncRNA_intronic	ENSG00000245293	NA	NA	NA	NA	NA	4q25	NA	NA	NA	NA	rs6856745	0.65	0.65	0.65	0.650958	0.5924	0.6825	0.621	0.7746	0.5327	0.58	0.7	0.63	0.73	0.6049	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.065832	3.065832	NA	0.563721	0.756015	NA	0.507	NA	2.5723123
1395	19	43522911	43522911	A	C	intronic	PSG11	NA	NA	NA	intronic	ENSG00000243130	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs9789252	0.59	0.59	0.59	0.567891	0.4751	0.9772	0.4683	0.3782	0.5685	0.47	0.99	0.46	0.39	0.5034	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.218082	NA	NA	0.44936	0.396136	NA	0.188	NA	2.57214
1395	1	38301476	38301476	G	A	intronic	MTF1	NA	NA	NA	intronic	ENSG00000188786	NA	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	rs3762359	0.57	0.57	0.559	0.523163	0.7247	0.4802	0.598	0.295	0.6155	0.74	0.52	0.59	0.33	NA	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.965618	NA	NA	0.703331	0.366329	NA	0.543	NA	2.571969
1395	5	52248291	52248291	T	C	UTR3	ITGA1	NM_181501:c.*10T>C	NA	NA	ncRNA_UTR3	ENSG00000213949	NA	NA	NA	NA	NA	5q11.2	NA	NA	NA	NA	rs1054085	0.61	0.61	0.638	0.581669	0.6113	0.5357	0.5331	0.6505	0.5399	0.62	0.56	0.56	0.7	0.6597	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.679151	NA	NA	0.657047	0.654215	NA	0.507	NA	2.571953
1395	20	61428423	61428423	A	C	intronic	MRGBP	NA	NA	NA	intronic	ENSG00000101189	NA	NA	NA	NA	NA	20q13.33	NA	NA	NA	NA	rs11696245	0.58	0.58	0.553	0.632188	0.4453	0.6161	0.5058	0.8631	0.6186	0.46	0.58	0.52	0.82	0.5298	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.268147	1.268147	NA	0.453096	0.80577	NA	0.377	NA	2.571804
1395	4	142651159	142651159	T	C	intronic	IL15	NA	NA	NA	intronic	ENSG00000164136	NA	NA	NA	NA	NA	4q31.21	NA	NA	NA	NA	rs12510030	0.49	0.49	0.478	0.530152	0.4592	0.5288	0.4121	0.5825	0.6176	0.46	0.49	0.44	0.56	0.4976	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.478015	NA	NA	0.471498	0.559491	ID=COSN167340;OCCURENCE=1(lung),1(large_intestine)	0.478	NA	2.571702
1395	17	73208182	73208182	C	T	intronic	NUP85	NA	NA	NA	intronic	ENSG00000125450	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs12946479	0.67	0.67	NA	0.663139	0.7376	0.8373	0.7536	0.329	0.7945	0.75	0.87	0.69	0.32	0.691	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.960747	NA	NA	NA	NA	NA	0.406	NA	2.5714
1395	5	135276701	135276701	T	C	intronic	FBXL21	NA	NA	NA	intronic	ENSG00000145826,ENSG00000164616	NA	NA	NA	NA	NA	5q31.1	NA	NA	NA	NA	rs31548	0.72	0.72	0.664	NA	NA	NA	NA	NA	NA	0.72	0.78	0.73	0.64	0.7327	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.286092	NA	NA	0.696332	0.6474	NA	0.638	NA	2.570968
1395	6	134304023	134304023	C	T	intronic	TBPL1	NA	NA	NA	intronic	ENSG00000028839	NA	NA	NA	NA	NA	6q23.2	NA	NA	NA	NA	rs2076583	0.29	0.29	0.261	0.236222	0.495	0.1508	0.3228	0.0688	0.2229	0.5	0.15	0.35	0.08	0.4001	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.826639	NA	NA	0.533961	0.148114	NA	0.37	NA	2.570939
1395	15	34103272	34103272	C	G	intronic	RYR3	NA	NA	NA	intronic	ENSG00000198838	NA	NA	NA	NA	NA	15q14	NA	NA	Name=9	NA	rs4780181	0.85	0.85	0.826	0.85024	0.8101	0.9484	0.8501	0.8222	0.8282	0.82	0.92	0.85	0.79	0.8326	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.215841	NA	NA	0.78637	0.840459	NA	0.804	NA	2.57093
1395	11	119217254	119217254	C	T	UTR5	C1QTNF5,MFRP	NM_015645:c.-6147G>A;NM_031433:c.-31G>A	NA	NA	UTR5	ENSG00000223953,ENSG00000235718,ENSG00000259159	ENST00000445041:c.-6147G>A;ENST00000555262:c.-31G>A,ENST00000449574:c.-31G>A,ENST00000360167:c.-31G>A;ENST00000530681:c.-31G>A	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs883247	0.63	0.63	0.618	0.635583	0.5865	0.7748	0.5562	0.5514	0.7127	0.58	0.77	0.58	0.56	0.5951	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.148465	NA	NA	0.580908	0.5407	NA	0.587	NA	2.5708254
1395	1	22160148	22160148	C	T	intronic	HSPG2	NA	NA	NA	intronic	ENSG00000142798	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs7547731	0.42	0.42	0.427	0.375	0.4821	0.6478	0.4553	0.0772	0.3292	0.49	0.64	0.41	0.08	0.4552	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.662821	NA	NA	0.492206	0.143733	NA	0.29	NA	2.570494
1395	21	38496883	38496883	A	G	intronic	TTC3	NA	NA	NA	intronic	ENSG00000182670	NA	NA	NA	NA	NA	21q22.13	NA	NA	NA	NA	rs2835613	0.57	0.57	0.534	0.593051	0.4612	0.629	0.611	0.6407	0.6145	0.46	0.65	0.6	0.65	0.5225	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.87653	NA	NA	0.446009	0.626764	NA	0.667	NA	2.570291
1395	22	36545137	36545137	A	T	intronic	APOL3	NA	NA	NA	exonic	ENSG00000128284	NA	nonsynonymous SNV	ENSG00000128284:ENST00000397289:exon2:c.T277A:p.W93R	NA	NA	22q12.3	NA	NA	NA	NA	rs132642	0.94	0.94	0.946	0.941693	0.8738	0.9911	0.9308	0.9909	0.9018	0.87	0.99	0.93	0.98	0.8839	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.123005	NA	NA	0.838721	0.969133	NA	0.913	NA	2.5702457
1395	7	150488616	150488616	A	G	UTR3	TMEM176B	NM_001101311:c.*3T>C,NM_014020:c.*3T>C,NM_001101314:c.*3T>C,NM_001101312:c.*3T>C	NA	NA	UTR3	ENSG00000106565	ENST00000492607:c.*3T>C,ENST00000447204:c.*3T>C,ENST00000326442:c.*3T>C,ENST00000434545:c.*3T>C,ENST00000429904:c.*3T>C,ENST00000450753:c.*3T>C	NA	NA	NA	NA	7q36.1	NA	NA	NA	NA	rs2302479	0.64	0.64	0.628	0.647764	0.5885	0.626	0.5072	0.8124	0.6084	0.56	0.67	0.51	0.81	0.592	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.70418	NA	NA	0.583023	0.780527	NA	0.522	NA	2.5698104
1395	5	118837834	118837834	A	G	intronic	HSD17B4	NA	NA	NA	intronic	ENSG00000133835	NA	NA	NA	NA	NA	5q23.1	NA	NA	NA	NA	rs55708333	0.4	0.4	0.402	0.423722	0.4811	0.5139	0.5375	0.2549	0.4192	0.43	0.44	0.47	0.24	0.4749	0.47	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.078903	NA	NA	0.474994	0.320391	NA	0.109	NA	2.569006
1395	18	21113285	21113285	T	C	intronic	NPC1	NA	NA	NA	intronic	ENSG00000141458	NA	NA	NA	NA	NA	18q11.2	NA	NA	NA	NA	rs2510344	0.53	0.53	0.51	0.522165	0.4592	0.6111	0.6153	0.4902	0.4724	0.47	0.64	0.56	0.48	0.5011	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.202345	NA	NA	0.470698	0.481843	NA	0.572	NA	2.569002
1395	7	130150705	130150705	G	A	intronic	COPG2	NA	NA	NA	intergenic	ENSG00000158623,ENSG00000239021	dist=2205;dist=136967	NA	NA	NA	NA	7q32.2	NA	NA	NA	NA	rs12706944	0.46	0.46	0.411	0.41873	0.5477	0.6121	0.5245	0.0514	0.5082	0.54	0.63	0.51	0.08	NA	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.409029	NA	NA	0.550283	0.114884	NA	0.406	NA	2.5686837
1395	1	151732700	151732700	A	G	intronic	MRPL9	NA	NA	NA	intronic	ENSG00000143436	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs10888433	0.52	0.52	0.509	0.512181	0.4642	0.4365	0.5951	0.6944	0.3344	0.46	0.4	0.58	0.71	0.49	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.753661	NA	NA	0.477326	0.631412	NA	0.5	NA	2.568474
1395	12	121017439	121017439	A	G	intronic	POP5	NA	NA	NA	intronic	ENSG00000167272	NA	NA	NA	NA	NA	12q24.31	NA	NA	Name=16	NA	rs563920	0.8	0.8	0.794	0.785144	0.7962	0.8413	0.8242	0.7042	0.7975	0.8	0.84	0.82	0.74	0.8146	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.379591	NA	NA	0.820814	0.706537	NA	0.775	NA	2.568386
1395	15	75129594	75129594	G	A	intronic	ULK3	NA	NA	NA	intronic	ENSG00000140474	NA	NA	NA	NA	NA	15q24.1	NA	NA	NA	NA	rs2290573	0.3	0.3	0.256	0.228634	0.502	0.1766	0.4496	0.0234	0.1217	0.5	0.17	0.44	0.03	0.4022	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.601281	NA	NA	0.52769	0.095947	NA	0.384	NA	2.56811
1395	6	158569886	158569886	T	C	intronic	SERAC1	NA	NA	NA	intronic	ENSG00000122335	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs9356399	0.44	0.44	0.404	0.400559	0.4801	0.4236	0.6297	0.2065	0.3947	0.47	0.47	0.6	0.22	0.4708	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.689451	NA	NA	0.481395	0.280654	NA	0.399	NA	2.567705
1395	19	2989810	2989810	G	T	intronic	TLE6	NA	NA	NA	intronic	ENSG00000104953	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs504199	0.54	0.54	0.564	0.529553	0.4751	0.5149	0.5202	0.7042	0.3712	0.48	0.51	0.51	0.7	0.4746	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.239229	NA	NA	0.482907	0.662733	NA	0.565	NA	2.567393
1395	19	55481669	55481669	T	C	intronic	NLRP2	NA	NA	NA	intronic	ENSG00000022556	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs269913	0.53	0.53	0.525	0.478634	0.4831	0.4028	0.4035	0.7345	0.2597	0.48	0.47	0.45	0.72	0.4575	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.856199	NA	NA	0.492093	0.684975	NA	0.543	NA	2.567307
1395	21	11124215	11124215	T	C	intergenic	BAGE,NONE	dist=25278;dist=NONE	NA	NA	intergenic	ENSG00000187172,ENSG00000231962	dist=25235;dist=29622	NA	NA	NA	NA	21p11.1	NA	NA	NA	NA	rs2740244	NA	NA	0.779	0.714257	0.7664	0.6935	0.7839	0.612	0.771	NA	NA	NA	NA	NA	0.17	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.702446	NA	NA	NA	NA	NA	0.123	NA	2.5669334
1395	20	31387954	31387954	C	G	intronic	DNMT3B	NA	NA	NA	intronic	ENSG00000088305	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs1997797	0.68	0.68	0.659	0.714058	0.4185	0.9931	0.6427	0.7655	0.7117	0.43	0.99	0.62	0.75	0.5663	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.412074	NA	NA	0.448372	0.701089	NA	0.572	NA	2.566828
1395	10	105796399	105796399	G	C	intronic	COL17A1	NA	NA	NA	intronic	ENSG00000065618	NA	NA	NA	NA	NA	10q24.33	Score=825;Name=V$EVI1_04	NA	NA	NA	rs2274098	0.73	0.73	0.715	0.691494	0.8201	0.8204	0.768	0.441	0.7106	0.81	0.84	0.78	0.42	0.7804	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.975924	NA	NA	0.833023	0.507944	NA	0.746	NA	2.566477
1395	12	21608043	21608043	A	G	intronic	PYROXD1	NA	NA	NA	intronic	ENSG00000121350	NA	NA	NA	NA	NA	12p12.1	NA	NA	NA	NA	rs2192183	0.48	0.48	0.472	0.476238	0.4483	0.5268	0.4841	0.4962	0.4202	0.44	0.52	0.48	0.5	0.49	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.09702	NA	NA	0.49558	0.487971	NA	0.5	NA	2.56612
1395	9	130242109	130242109	C	T	intronic	LRSAM1	NA	NA	NA	intronic	ENSG00000148356	NA	NA	NA	NA	NA	9q33.3	NA	NA	NA	NA	rs1539568	0.37	0.37	0.385	0.352037	0.5298	0.2063	0.2795	0.3676	0.3497	0.54	0.17	0.31	0.39	0.4232	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.147352	NA	NA	0.480921	0.37852	NA	0.275	NA	2.566079
1395	6	33656969	33656969	G	A	intronic	ITPR3	NA	NA	NA	intronic	ENSG00000096433	NA	NA	NA	NA	NA	6p21.31	NA	NA	NA	NA	rs2296739	0.5	0.5	0.442	0.510583	0.4692	0.8462	0.5735	0.0983	0.7198	0.48	0.82	0.57	0.11	0.5264	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.03298	NA	NA	0.438372	0.181571	NA	0.464	NA	2.566028
1395	9	130236243	130236243	G	A	intronic	LRSAM1	NA	NA	NA	intronic	ENSG00000148356	NA	NA	NA	NA	NA	9q33.3	NA	NA	NA	NA	rs2250267	0.37	0.37	0.35	0.351837	0.5298	0.2063	0.2795	0.3669	0.3497	0.54	0.17	0.31	0.38	0.4222	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.842536	NA	NA	0.481977	0.378575	NA	0.268	NA	2.566023
1395	6	70962044	70962044	A	G	intronic	COL9A1	NA	NA	NA	intronic	ENSG00000112280	NA	NA	NA	NA	NA	6q13	NA	NA	NA	NA	rs519068	0.41	0.41	0.418	0.403355	0.4911	0.2986	0.3055	0.5265	0.3241	0.48	0.26	0.35	0.53	0.4485	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.312399	NA	NA	0.494535	0.511348	NA	0.522	NA	2.565865
1395	20	50241714	50241714	C	A	intronic	ATP9A	NA	NA	NA	intronic	ENSG00000054793	NA	NA	NA	NA	NA	20q13.2	NA	NA	NA	NA	rs2235859	0.46	0.46	0.444	0.472244	0.4712	0.2262	0.598	0.649	0.3988	0.46	0.27	0.56	0.61	0.4886	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.872947	NA	NA	0.475	0.622106	NA	0.348	NA	2.5652
1396	11	1216491	1216491	G	C	intergenic	MUC2,MUC5B	dist=112074;dist=27804	NA	NA	intergenic	ENSG00000215182,ENSG00000117983	dist=54130;dist=27805	NA	NA	Score=391;Name=lod=52	NA	11p15.5	NA	NA	NA	NA	rs1132434	0.56	0.56	0.527	0.513978	0.5944	0.6687	0.5562	0.298	0.5337	0.6	0.72	0.58	0.29	0.5858	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.169141	2.169141	NA	0.588487	0.331808	NA	0.507	NA	2.5646464
1396	5	70834833	70834833	G	A	intronic	BDP1	NA	NA	NA	intronic	ENSG00000145734	NA	NA	NA	NA	NA	5q13.2	NA	NA	NA	NA	rs276590	0.42	0.42	0.417	0.439497	0.492	0.379	0.3444	0.41	0.5552	0.5	0.39	0.35	0.4	0.4617	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.166159	NA	NA	0.482209	0.38609	NA	0.406	NA	2.564091
1396	16	57111825	57111825	T	C	intronic	NLRC5	NA	NA	NA	intronic	ENSG00000140853	NA	NA	NA	NA	NA	16q13	NA	NA	NA	NA	rs27392	0.32	0.32	0.333	0.272564	0.5089	0.1518	0.3602	0.1543	0.2515	0.51	0.15	0.38	0.16	0.4089	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.80731	NA	NA	0.51814	0.202684	NA	0.355	NA	2.56406
1396	19	53411448	53411448	G	A	intergenic	ZNF320,ZNF816-ZNF321P	dist=16849;dist=18940	NA	NA	intergenic	ENSG00000182986,ENSG00000213793	dist=10502;dist=7001	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs7256400	0.4	0.4	0.404	0.406749	0.2316	0.2917	0.4769	0.7239	0.227	0.24	0.31	0.42	0.72	0.3092	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.227425	NA	NA	0.228894	0.674087	NA	0.471	NA	2.5636394
1396	7	21695416	21695416	A	G	intronic	DNAH11	NA	NA	NA	intronic	ENSG00000105877	NA	NA	NA	NA	NA	7p15.3	NA	NA	NA	NA	rs11769118	0.32	0.32	0.29	0.295727	0.5109	0.2232	0.3703	0.0779	0.3906	0.51	0.24	0.4	0.07	0.4443	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.578564	1.578564	NA	0.481215	0.150348	NA	0.348	NA	2.563585
1396	17	79165171	79165171	G	A	intronic	AZI1	NA	NA	NA	intronic	ENSG00000141577	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs869370	0.45	0.45	0.398	0.436102	0.4453	0.6667	0.6268	0.0408	0.5879	0.45	0.68	0.6	0.07	0.5076	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.399223	NA	NA	0.483589	0.127442	NA	0.377	NA	2.563511
1396	19	53411368	53411368	G	A	intergenic	ZNF320,ZNF816-ZNF321P	dist=16769;dist=19020	NA	NA	intergenic	ENSG00000182986,ENSG00000213793	dist=10422;dist=7081	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs7256260	0.39	0.39	0.41	0.403954	0.2316	0.2778	0.4769	0.7239	0.227	0.23	0.29	0.42	0.72	0.3097	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.745203	NA	NA	0.22878	0.674658	NA	0.464	NA	2.5632534
1396	12	1863728	1863728	A	T	intronic	ADIPOR2	NA	NA	NA	intronic	ENSG00000006831	NA	NA	NA	NA	NA	12p13.33	NA	NA	NA	NA	rs11061971	0.59	0.59	0.573	0.605032	0.4781	0.6091	0.6311	0.7247	0.5511	0.46	0.6	0.61	0.75	0.5186	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.161641	NA	NA	0.440233	0.688606	NA	0.514	NA	2.563067
1396	8	23059280	23059280	G	T	intronic	TNFRSF10A	NA	NA	NA	intronic	ENSG00000104689	NA	NA	NA	NA	NA	8p21.3	NA	NA	NA	NA	rs4872078	0.57	0.57	0.548	0.577476	0.4543	0.9732	0.6182	0.2678	0.6861	0.46	0.98	0.58	0.25	0.5251	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.628152	NA	NA	0.457791	0.304131	NA	0.341	NA	2.562809
1396	14	69798284	69798284	G	A	intronic	GALNT16	NA	NA	NA	intronic	ENSG00000100626	NA	NA	NA	NA	NA	14q24.1	NA	NA	NA	NA	rs1147461	0.46	0.46	0.436	0.44988	0.4841	0.5645	0.5735	0.1861	0.5654	0.51	0.57	0.56	0.19	0.4861	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.845039	NA	NA	0.467442	0.253064	NA	0.449	NA	2.562358
1396	1	7807897	7807897	A	G	intronic	CAMTA1	NA	NA	NA	intronic	ENSG00000171735	NA	NA	NA	NA	NA	1p36.23	NA	NA	NA	NA	rs12133253	0.63	0.63	0.599	0.605831	0.7157	0.4702	0.7767	0.5779	0.5491	0.71	0.46	0.72	0.62	NA	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.51618	NA	NA	0.722187	0.604046	NA	0.558	NA	2.562113
1396	5	43535754	43535754	G	C	intronic	PAIP1	NA	NA	NA	intronic	ENSG00000172239	NA	NA	NA	NA	NA	5p12	NA	NA	NA	NA	rs6869933	0.4	0.4	0.418	0.402556	0.503	0.0893	0.3818	0.6271	0.3333	0.48	0.09	0.43	0.63	0.4468	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.122438	NA	NA	0.488134	0.590599	NA	0.529	NA	2.562066
1396	20	44334588	44334588	C	G	intronic	WFDC13	NA	NA	NA	intronic	ENSG00000168634	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs232290	0.65	0.65	0.656	0.694688	0.4523	0.7966	0.4986	0.9024	0.6973	0.43	0.78	0.53	0.91	0.5404	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.103444	NA	NA	0.445581	0.809124	NA	0.63	NA	2.561719
1396	22	45755666	45755666	C	T	intronic	SMC1B	NA	NA	NA	intronic	ENSG00000077935	NA	NA	NA	NA	NA	22q13.31	NA	NA	NA	NA	rs1012493	0.36	0.36	0.334	0.298722	0.493	0.2996	0.4683	0.0817	0.271	0.5	0.34	0.43	0.1	0.4321	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.103583	NA	NA	0.513203	0.148043	NA	0.21	NA	2.561697
1396	1	1686962	1686962	C	T	intronic	NADK	NA	NA	NA	intronic	ENSG00000008130	NA	NA	NA	NA	NA	1p36.33	NA	NA	NA	NA	rs2076327	0.36	0.36	0.336	0.341853	0.493	0.3145	0.4078	0.1846	0.3804	0.49	0.32	0.41	0.18	0.4483	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.601431	NA	NA	0.497093	0.223786	NA	0.377	NA	2.561607
1396	7	100456611	100456611	G	C	intronic	SLC12A9	NA	NA	NA	intronic	ENSG00000146828	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs314374	0.48	0.48	0.442	0.463059	0.4622	0.8065	0.5879	0.0991	0.5133	0.46	0.81	0.54	0.1	0.5011	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.671233	NA	NA	0.475116	0.181571	NA	0.362	NA	2.561584
1396	17	10546130	10546130	T	G	intronic	MYH3	NA	NA	NA	intronic	ENSG00000109063	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs2285468	0.54	0.54	0.54	0.525958	0.7893	0.3859	0.5476	0.379	0.5828	0.78	0.37	0.55	0.37	0.6505	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.290627	NA	NA	NA	NA	NA	0.659	NA	2.5602
1396	21	47558591	47558591	A	G	intronic	FTCD	NA	NA	NA	intronic	ENSG00000160282	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs62214031	0.38	0.38	0.353	0.394768	0.5268	0.2669	0.3127	0.3858	0.4611	0.51	0.25	0.35	0.36	0.4439	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.48436	NA	NA	0.469153	0.382945	NA	0.551	NA	2.560147
1396	19	11327571	11327571	C	T	intronic	DOCK6	NA	NA	NA	intronic	ENSG00000130158	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs4804150	0.32	0.32	0.287	0.278355	0.5368	0.2808	0.3084	0.0287	0.3262	0.53	0.27	0.34	0.03	0.4035	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.009853	NA	NA	0.499764	0.100047	NA	0.362	NA	2.559936
1396	20	54457983	54457983	A	G	intergenic	DOK5,CBLN4	dist=1190273;dist=114430	NA	NA	intergenic	ENSG00000235166,ENSG00000054803	dist=373231;dist=114513	NA	NA	NA	NA	20q13.2	NA	NA	NA	NA	rs1370270	0.9	0.9	0.918	0.933107	0.7734	1	0.8977	0.9932	0.9724	0.78	1	0.88	0.99	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.472871	NA	NA	NA	NA	NA	0.826	NA	2.5599334
1396	11	2356769	2356769	T	C	intergenic	TSPAN32,CD81	dist=17339;dist=41778	NA	NA	ncRNA_exonic	ENSG00000236264	NA	NA	NA	Score=735;Name=lod=1300	NA	11p15.5	NA	NA	NA	NA	rs2651794	0.65	0.65	0.654	0.691893	0.8231	0.4554	0.7695	0.6422	0.8129	0.81	0.41	0.77	0.61	0.7771	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.11989	NA	NA	0.840005	0.677339	NA	0.775	NA	2.559795
1396	2	215855780	215855780	G	A	intronic	ABCA12	NA	NA	NA	intronic	ENSG00000144452	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs4533467	0.31	0.31	0.28	0.30012	0.495	0.2857	0.3256	0.031	0.4601	0.5	0.26	0.37	0.03	0.4433	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.388142	NA	NA	0.501978	0.112551	NA	0.297	NA	2.559722
1396	12	21614903	21614903	A	G	intronic	PYROXD1	NA	NA	NA	intronic	ENSG00000121350	NA	NA	NA	NA	NA	12p12.1	NA	NA	NA	NA	rs3825287	0.49	0.49	0.475	0.48722	0.4483	0.5486	0.4841	0.4955	0.455	0.44	0.54	0.48	0.5	0.4969	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.115141	NA	NA	0.495929	0.48842	NA	0.522	NA	2.558871
1396	8	21959877	21959877	T	G	intronic	FAM160B2	NA	NA	NA	intronic	ENSG00000158863	NA	NA	NA	NA	NA	8p21.3	NA	NA	NA	NA	rs7812435	0.8	0.8	0.81	0.794129	0.7048	0.9921	0.7839	0.7118	0.8006	0.72	0.99	0.75	0.72	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.526571	NA	NA	0.736541	0.740543	NA	0.239	NA	2.558659
1396	20	43600673	43600673	C	G	intronic	STK4	NA	NA	NA	intronic	ENSG00000101109	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs6130717	0.43	0.43	0.437	0.445487	0.5	0.2639	0.317	0.6725	0.3609	0.5	0.21	0.32	0.66	0.4508	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.467498	NA	NA	0.490698	0.61316	NA	0.551	NA	2.558502
1396	3	124281980	124281980	T	C	intronic	KALRN	NA	NA	NA	intronic	ENSG00000160145	NA	NA	NA	NA	NA	3q21.2	NA	NA	NA	NA	rs2256831	0.67	0.67	0.699	0.657149	0.495	0.8641	0.5706	0.8464	0.4162	0.49	0.85	0.54	0.83	0.5129	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.679958	NA	NA	0.433976	0.79798	NA	0.645	NA	2.558124
1396	3	9859456	9859456	C	G	intronic	ARPC4-TTLL3,TTLL3	NA	NA	NA	intronic	ENSG00000214021,ENSG00000250151	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs3806672	0.32	0.32	0.305	0.265575	0.5616	0.1498	0.3012	0.1278	0.2413	0.57	0.15	0.34	0.13	0.3959	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.779363	4.779363	NA	0.485209	0.175492	NA	0.413	NA	2.557291
1396	20	31388636	31388636	T	C	intronic	DNMT3B	NA	NA	NA	intronic	ENSG00000088305	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs2424928	0.71	0.71	0.679	0.742612	0.4205	0.9931	0.6542	0.8661	0.7117	0.43	0.99	0.63	0.85	0.5737	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.611431	NA	NA	0.448953	0.783023	NA	0.587	NA	2.556847
1396	5	1212647	1212647	C	T	intronic	SLC6A19	NA	NA	NA	intronic	ENSG00000174358	NA	NA	NA	NA	NA	5p15.33	NA	NA	NA	NA	rs13180809	0.34	0.34	0.334	0.316094	0.5278	0.2847	0.2709	0.1604	0.3732	0.5	0.27	0.31	0.18	0.4174	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.429526	NA	NA	0.498487	0.191731	NA	0.29	NA	2.556313
1396	7	30876432	30876432	A	G	ncRNA_intronic	INMT-FAM188B	NA	NA	NA	intronic	ENSG00000106125,ENSG00000254959	NA	NA	NA	NA	NA	7p14.3	NA	NA	NA	NA	rs10258097	0.63	0.63	0.64	0.688498	0.5686	0.5208	0.5173	0.944	0.7607	0.56	0.56	0.53	0.91	0.6209	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.134236	NA	NA	0.588046	0.896964	NA	0.551	NA	2.5557873
1396	3	53912341	53912341	C	A	intronic	ACTR8	NA	NA	NA	intronic	ENSG00000113812	NA	NA	NA	NA	NA	3p21.1	NA	NA	NA	NA	rs3733081	0.68	0.68	0.697	0.711062	0.4523	0.9444	0.6282	0.7852	0.6953	0.43	0.95	0.62	0.79	0.5588	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.760214	NA	NA	0.43314	0.730595	NA	0.703	NA	2.55576
1396	9	15784496	15784496	C	G	intronic	CCDC171	NA	NA	NA	intronic	ENSG00000164989	NA	NA	NA	NA	NA	9p22.3	NA	NA	NA	NA	rs2382540	0.41	0.41	0.418	0.447484	0.4742	0.3651	0.3631	0.4455	0.5675	0.48	0.35	0.38	0.42	0.472	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.538046	NA	NA	0.49814	0.457766	NA	0.399	NA	2.55566
1396	17	8194318	8194318	G	A	intronic	SLC25A35	NA	NA	NA	intronic	ENSG00000125434	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs72835272	0.28	0.28	0.289	0.314297	0.5239	0.2381	0.3055	0.1301	0.4325	0.44	0.2	0.31	0.11	0.4301	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.03084	NA	NA	0.490465	0.197004	NA	NA	NA	2.555535
1397	22	45754558	45754558	A	G	intronic	SMC1B	NA	NA	NA	intronic	ENSG00000077935	NA	NA	NA	NA	NA	22q13.31	NA	NA	NA	NA	rs5765281	0.36	0.36	0.335	0.299321	0.494	0.2986	0.4726	0.0817	0.271	0.51	0.34	0.43	0.1	0.4328	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.431332	NA	NA	0.518833	0.152463	NA	0.21	NA	2.554367
1397	9	97221434	97221434	G	A	intronic	HIATL1	NA	NA	NA	intronic	ENSG00000148110	NA	NA	NA	NA	NA	9q22.32	NA	NA	NA	NA	rs9409765	0.52	0.52	0.48	0.504992	0.4672	0.3919	0.6412	0.5461	0.5082	0.49	0.39	0.64	0.62	0.5016	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.285794	NA	NA	0.478372	0.522242	NA	0.435	NA	2.552828
1397	5	60083275	60083275	C	A	intronic	ELOVL7	NA	NA	NA	UTR5	ENSG00000164181	ENST00000438340:c.-51G>T,ENST00000504455:c.-51G>T	NA	NA	NA	NA	5q12.1	NA	NA	NA	NA	rs10072745	0.68	0.68	0.684	0.640974	0.5358	0.8998	0.5605	0.711	0.4448	0.55	0.91	0.54	0.69	0.557	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.141552	NA	NA	0.521279	0.671513	NA	0.616	NA	2.5525877
1397	20	256573	256573	A	G	intronic	C20orf96	NA	NA	NA	intronic	ENSG00000196476	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs6075567	0.49	0.49	0.48	0.46885	0.4881	0.5139	0.3862	0.5166	0.3967	0.5	0.55	0.39	0.47	0.4678	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.139962	NA	NA	0.491977	0.511802	NA	0.464	NA	2.552123
1397	4	73793749	73793749	T	C	intergenic	ADAMTS3,COX18	dist=359233;dist=126667	NA	NA	intergenic	ENSG00000270665,ENSG00000252955	dist=119840;dist=37146	NA	NA	NA	NA	4q13.3	NA	NA	NA	NA	rs7663680	0.81	0.81	0.792	0.819089	0.7813	0.9683	0.6542	0.7239	0.9499	0.79	0.98	0.69	0.72	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.93597	NA	NA	NA	NA	NA	0.746	NA	2.5520334
1397	6	52712645	52712645	C	G	intergenic	GSTA5,GSTA3	dist=1752;dist=48794	NA	NA	downstream	ENSG00000230375	NA	NA	NA	NA	NA	6p12.2	NA	NA	NA	NA	rs9296694	0.92	0.92	0.9	0.890775	0.9483	0.8681	0.9669	0.8464	0.8609	0.95	0.91	0.98	0.85	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.605786	NA	NA	NA	NA	NA	0.935	NA	2.5517
1397	9	125761051	125761051	G	A	intronic	RABGAP1	NA	NA	NA	intronic	ENSG00000011454	NA	NA	NA	NA	NA	9q33.2	NA	Name=FOXA1_(C-20),FOXA1_(SC-101058)	NA	NA	rs605546	0.5	0.5	0.445	0.490815	0.8509	0.3095	0.5821	0.0605	0.8241	0.88	0.29	0.62	0.09	0.7249	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.28568	NA	NA	0.873197	0.176885	ID=COSM150705,COSM150706;OCCURENCE=1(stomach)	0.486	NA	2.551003
1397	16	57103854	57103854	T	C	intronic	NLRC5	NA	NA	NA	intronic	ENSG00000140853	NA	NA	NA	NA	NA	16q13	NA	NA	NA	NA	rs289711	0.38	0.38	0.368	0.379992	0.4761	0.2897	0.3948	0.3366	0.4223	0.48	0.3	0.42	0.29	0.5006	0.48	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.674861	NA	NA	0.472695	0.366865	NA	0.37	NA	2.550605
1397	8	144462169	144462169	A	G	intronic	RHPN1	NA	NA	NA	intronic	ENSG00000158106	NA	NA	NA	NA	NA	8q24.3	NA	Name=E2F6	NA	NA	rs3812440	0.75	0.75	0.742	0.764577	0.8171	0.7778	0.8242	0.5772	0.908	0.83	0.78	0.82	0.56	0.8091	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.215331	NA	NA	0.823415	0.631296	NA	0.732	NA	2.550385
1397	3	96387596	96387596	G	A	intergenic	LOC100287639,EPHA6	dist=985559;dist=145829	NA	NA	intergenic	ENSG00000212031,ENSG00000241018	dist=2473;dist=84433	NA	NA	NA	NA	3q11.2	NA	NA	NA	NA	rs3884654	0.7	0.7	0.683	0.702476	0.7833	0.7391	0.7349	0.4864	0.8507	0.78	0.75	0.74	0.51	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.94428	NA	NA	NA	NA	NA	0.638	NA	2.5500334
1397	12	52635443	52635443	T	C	intronic	KRT7	NA	NA	NA	intronic	ENSG00000135480	NA	NA	NA	NA	NA	12q13.13	NA	Name=CTCF,CTCF_(SC-5916)	NA	NA	rs2243588	0.85	0.85	0.851	0.853435	0.8191	0.9028	0.8343	0.851	0.8548	0.83	0.9	0.78	0.87	0.8272	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.397502	NA	NA	0.803721	0.838402	NA	0.79	NA	2.549979
1397	17	18678548	18678548	C	T	intronic	FBXW10	NA	NA	NA	intronic	ENSG00000171931	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs4630608	0.43	0.43	0.447	0.39996	0.497	0.2688	0.4726	0.4713	0.2873	0.5	0.29	0.46	0.46	0.4532	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.167157	NA	NA	0.5	0.481472	NA	0.507	NA	2.5498
1397	7	87178626	87178626	C	T	intronic	ABCB1	NA	NA	NA	intronic	ENSG00000085563	NA	NA	NA	NA	NA	7q21.12	NA	NA	NA	NA	rs2235013	0.46	0.46	0.441	0.465056	0.493	0.375	0.5461	0.5151	0.4039	0.48	0.35	0.51	0.51	0.4621	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.178381	NA	NA	0.495116	0.466636	NA	0.464	NA	2.549784
1397	11	18771041	18771041	G	C	intronic	PTPN5	NA	NA	NA	intronic	ENSG00000110786	NA	NA	NA	NA	NA	11p15.1	NA	NA	NA	NA	rs2028897	0.72	0.72	0.661	0.705671	0.7247	0.8056	0.7752	0.5333	0.7669	0.72	0.83	0.8	0.54	0.7256	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.600382	NA	NA	NA	NA	NA	0.79	NA	2.5497
1397	17	15217389	15217389	G	A	intronic	TEKT3	NA	NA	NA	intronic	ENSG00000125409	NA	NA	NA	NA	NA	17p12	NA	NA	NA	NA	rs230897	0.53	0.53	0.505	0.535743	0.4722	0.6081	0.4481	0.562	0.5532	0.5	0.63	0.43	0.52	0.4952	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.704828	NA	NA	0.482907	0.532456	NA	0.58	NA	2.549693
1397	21	34837623	34837623	C	A	intronic	TMEM50B	NA	NA	NA	intronic	ENSG00000142188,ENSG00000159128	NA	NA	NA	NA	NA	21q22.11	NA	NA	NA	NA	rs2248820	0.66	0.66	0.652	0.684105	0.4453	0.8125	0.5951	0.8548	0.6299	0.46	0.83	0.57	0.84	0.5504	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.589188	NA	NA	0.454651	0.810032	NA	0.696	NA	2.549649
1397	1	167059462	167059462	G	C	intronic	GPA33	NA	NA	NA	intronic	ENSG00000143167	NA	NA	NA	NA	NA	1q24.1	NA	NA	NA	NA	rs2281963	0.41	0.41	0.413	0.383586	0.5348	0.1736	0.3429	0.5605	0.2342	0.51	0.18	0.39	0.55	0.4204	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.300543	NA	NA	0.496163	0.538357	NA	0.486	NA	2.548637
1397	8	95853708	95853708	G	A	intronic	INTS8	NA	NA	NA	intronic	ENSG00000164941	NA	NA	NA	NA	NA	8q22.1	NA	NA	NA	NA	rs11996455	0.52	0.52	0.503	0.524561	0.501	0.6548	0.5634	0.3775	0.5859	0.51	0.63	0.57	0.39	0.4989	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.831662	NA	NA	0.451617	0.430322	NA	0.543	NA	2.548483
1397	21	43826391	43826391	T	C	intronic	UBASH3A	NA	NA	NA	intronic	ENSG00000160185	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs3746924	0.47	0.47	0.451	0.466254	0.4712	0.4623	0.4121	0.5333	0.4131	0.48	0.45	0.44	0.51	0.4696	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.626504	NA	NA	0.510814	0.517476	NA	0.486	NA	2.548386
1397	9	129740101	129740101	G	T	intronic	RALGPS1	NA	NA	NA	intronic	ENSG00000136828	NA	NA	NA	NA	NA	9q33.3	NA	NA	NA	NA	rs10819259	0.59	0.59	0.543	0.580272	0.7346	0.8185	0.5562	0.1369	0.7924	0.75	0.78	0.56	0.15	NA	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.388871	NA	NA	0.717473	0.232659	NA	0.536	NA	2.547927
1397	4	57219523	57219523	A	G	intronic	AASDH	NA	NA	NA	intronic	ENSG00000157426	NA	NA	NA	NA	NA	4q12	NA	NA	NA	NA	rs6554347	0.4	0.4	0.394	0.397165	0.502	0.3075	0.3545	0.382	0.4325	0.5	0.29	0.37	0.37	0.4598	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.674849	NA	NA	0.490465	0.374489	NA	0.42	NA	2.547735
1397	17	4778487	4778487	G	A	intronic	MINK1	NA	NA	NA	intronic	ENSG00000141503	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs8078776	0.49	0.49	0.474	0.463059	0.7237	0.1339	0.6599	0.4002	0.4796	0.72	0.13	0.69	0.43	NA	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.647293	NA	NA	0.729415	0.455202	NA	0.667	NA	2.546885
1397	15	90969335	90969335	G	T	intronic	IQGAP1	NA	NA	NA	intronic	ENSG00000140575	NA	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs2256388	0.65	0.65	0.666	0.678115	0.4423	0.8185	0.6484	0.8147	0.6125	0.45	0.83	0.57	0.82	0.5566	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.603946	NA	NA	0.454514	0.770246	NA	0.725	NA	2.546586
1397	14	105207134	105207134	A	G	intronic	ADSSL1	NA	NA	NA	intronic	ENSG00000185100	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs3803307	0.61	0.61	0.579	0.666334	0.4483	0.6458	0.6599	0.8669	0.6452	0.43	0.62	0.65	0.85	0.5451	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.813498	NA	NA	0.460349	0.82433	NA	0.616	NA	2.546251
1397	11	118037813	118037813	G	T	intronic	SCN2B	NA	NA	NA	intronic	ENSG00000149575	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs8192613	0.54	0.54	0.528	0.514377	0.4811	0.7758	0.5202	0.3381	0.5133	0.5	0.79	0.49	0.33	0.5022	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.387994	NA	NA	0.47067	0.374488	NA	0.428	NA	2.54603
1397	11	902939	902939	G	A	intronic	CHID1	NA	NA	NA	intronic	ENSG00000177830	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs12799186	0.39	0.39	0.336	0.324081	0.5169	0.2401	0.5677	0.211	0.1922	0.51	0.28	0.54	0.2	0.4388	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.501828	NA	NA	0.498488	0.240127	NA	0.471	NA	2.545812
1397	16	570623	570623	G	A	intronic	RAB11FIP3	NA	NA	NA	intronic	ENSG00000090565	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs2071978	0.5	0.5	0.475	0.533946	0.4662	0.5774	0.6153	0.348	0.7526	0.48	0.56	0.59	0.38	0.5263	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.319482	NA	NA	0.462209	0.344843	ID=COSN165085;OCCURENCE=2(breast),1(NS),1(haematopoietic_and_lymphoid_tissue),1(pancreas),1(skin),1(lung)	0.297	NA	2.545291
1397	10	106159305	106159305	G	A	intronic	CCDC147	NA	NA	NA	intronic	ENSG00000120051	NA	NA	NA	NA	NA	10q25.1	NA	NA	NA	NA	rs10509772	0.56	0.56	0.587	0.553115	0.4851	0.5099	0.4164	0.7852	0.4509	0.48	0.52	0.48	0.8	0.4937	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.366168	NA	NA	0.47593	0.72424	NA	0.594	NA	2.54527
1397	2	234235749	234235749	G	C	intronic	SAG	NA	NA	NA	intronic	ENSG00000130561	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs2304774	0.38	0.38	0.364	0.366813	0.5219	0.3849	0.3055	0.1392	0.5399	0.51	0.39	0.37	0.16	0.4406	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.4145	NA	NA	0.492295	0.199328	NA	0.333	NA	2.545205
1397	2	29386646	29386646	G	C	intronic	CLIP4	NA	NA	NA	intronic	ENSG00000115295	NA	NA	NA	NA	NA	2p23.2	NA	NA	NA	NA	rs10200936	0.64	0.64	0.634	0.656949	0.4652	0.875	0.6484	0.6452	0.6513	0.46	0.87	0.62	0.67	0.547	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.304155	NA	NA	0.442674	0.618929	NA	0.616	NA	2.545126
1398	2	170099899	170099899	G	A	intronic	LRP2	NA	NA	NA	intronic	ENSG00000081479	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	rs2075254	0.54	0.54	0.502	0.61861	0.4632	0.4772	0.6383	0.7201	0.773	0.46	0.46	0.63	0.69	0.5373	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.605488	NA	NA	0.455	0.690195	NA	0.616	NA	2.5445
1398	11	9072140	9072140	C	T	intronic	SCUBE2	NA	NA	NA	ncRNA_intronic	ENSG00000253973	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs3751052	0.61	0.61	0.615	0.616613	0.6123	0.6329	0.6988	0.6301	0.5276	0.61	0.61	0.64	0.61	0.5939	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.443397	1.443397	NA	0.58345	0.646297	NA	0.616	NA	2.5436833
1398	2	170099446	170099446	T	G	intronic	LRP2	NA	NA	NA	intronic	ENSG00000081479	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	rs831041	0.54	0.54	0.513	0.61861	0.4632	0.4772	0.6383	0.7201	0.773	0.46	0.46	0.63	0.69	0.5383	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.140666	NA	NA	0.455698	0.691557	NA	0.609	NA	2.542802
1398	22	32097775	32097775	T	C	intronic	PRR14L	NA	NA	NA	intronic	ENSG00000183530	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs6518754	0.37	0.37	0.365	0.351637	0.5139	0.3313	0.3112	0.205	0.4325	0.51	0.33	0.36	0.22	0.4392	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.257553	1.257553	NA	0.504186	0.264866	ID=COSN166738;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.333	NA	2.542714
1398	6	26094367	26094367	G	A	intronic	HFE	NA	NA	NA	intronic	ENSG00000010704	NA	NA	NA	NA	NA	6p22.2	NA	NA	NA	NA	rs1572982	0.6	0.6	0.586	0.590655	0.4722	0.6954	0.5793	0.6377	0.5491	0.46	0.76	0.57	0.66	0.5146	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.705875	NA	NA	0.470814	0.606673	ID=COSN167717;OCCURENCE=1(large_intestine)	0.587	NA	2.542386
1398	18	77246978	77246978	G	A	intronic	NFATC1	NA	NA	NA	intronic	ENSG00000131196	NA	NA	NA	NA	NA	18q23	NA	NA	NA	NA	rs754096	0.43	0.43	0.415	0.40595	0.507	0.4653	0.4438	0.1891	0.5072	0.51	0.49	0.5	0.21	0.4735	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.247068	NA	NA	0.47729	0.21781	NA	0.362	NA	2.54221
1398	14	39784014	39784014	A	G	intronic	CTAGE5	NA	NA	NA	intronic	ENSG00000150527,ENSG00000258941	NA	NA	NA	NA	NA	14q21.1	NA	NA	NA	NA	rs2415539	NA	NA	NA	0.701877	0.8469	0.7659	0.719	0.4667	0.7924	NA	NA	NA	NA	NA	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.975002	NA	NA	0.611629	0.355	NA	0.232	NA	2.541471
1398	1	207263829	207263829	A	G	intronic	C4BPB	NA	NA	NA	intronic	ENSG00000123843	NA	NA	NA	NA	NA	1q32.2	NA	NA	NA	NA	rs6690037	0.47	0.47	0.43	0.44349	0.4702	0.747	0.536	0.0658	0.5481	0.48	0.79	0.51	0.06	0.5017	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.034097	NA	NA	0.486977	0.143895	NA	0.348	NA	2.541123
1398	2	98169742	98169742	A	C	intronic	ANKRD36B	NA	NA	NA	ncRNA_intronic	ENSG00000196912	NA	NA	NA	NA	NA	2q11.2	NA	NA	NA	NA	rs12998184	0.39	0.39	0.301	0.296925	0.6402	0.2282	0.4164	0.1044	0.1902	0.63	0.27	0.47	0.11	0.5119	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.162064	NA	NA	0.640455	0.198822	NA	0.355	NA	2.5407783
1398	20	5169877	5169877	A	G	intronic	CDS2	NA	NA	NA	intronic	ENSG00000101290	NA	NA	NA	NA	NA	20p12.3	NA	NA	NA	NA	rs6038087	0.48	0.48	0.515	0.518371	0.4732	0.2421	0.3876	0.7315	0.6544	0.5	0.27	0.42	0.72	0.4899	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.202609	NA	NA	0.496512	0.686337	NA	0.587	NA	2.540388
1398	8	40554742	40554742	C	T	intronic	ZMAT4	NA	NA	NA	intronic	ENSG00000165061	NA	NA	NA	NA	NA	8p11.21	NA	NA	NA	NA	rs11781516	0.54	0.54	0.545	0.570288	0.4702	0.5546	0.562	0.6604	0.5736	0.46	0.55	0.56	0.64	0.5191	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.796353	NA	NA	0.471977	0.619383	NA	0.587	NA	2.538723
1398	7	128371206	128371206	G	A	UTR3	FAM71F1	NM_032599:c.*39G>A	NA	NA	UTR3	ENSG00000135248	ENST00000485070:c.*39G>A,ENST00000484425:c.*511G>A,ENST00000315184:c.*39G>A	NA	NA	NA	NA	7q32.1	NA	NA	NA	NA	rs339066	0.68	0.68	0.68	0.70627	0.5875	0.753	0.7032	0.7753	0.6892	0.6	0.77	0.67	0.72	0.6383	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.20653	NA	NA	0.569419	0.740808	NA	0.696	NA	2.5381144
1398	12	52943144	52943144	G	A	intronic	KRT71	NA	NA	NA	intronic	ENSG00000139648	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs4761930	0.39	0.39	0.35	0.326877	0.506	0.499	0.4726	0.0272	0.2669	0.5	0.47	0.49	0.05	0.4416	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.091141	NA	NA	0.514302	0.101453	NA	0.384	NA	2.538098
1398	5	958621	958621	G	A	intergenic	TRIP13,LOC100506688	dist=40457;dist=29804	NA	NA	intergenic	ENSG00000248949,ENSG00000250173	dist=1986;dist=20859	NA	NA	NA	NA	5p15.33	NA	NA	NA	NA	rs11134356	0.74	0.74	0.675	0.743011	0.7962	0.7014	0.8718	0.6498	0.7658	0.8	0.69	0.86	0.63	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.607254	NA	NA	NA	NA	NA	0.377	NA	2.5371334
1398	16	65005462	65005462	G	A	intronic	CDH11	NA	NA	NA	intronic	ENSG00000140937	NA	NA	NA	NA	NA	16q21	NA	NA	NA	NA	rs12597529	0.53	0.53	0.543	0.547324	0.4761	0.7907	0.5605	0.2927	0.7045	0.49	0.77	0.49	0.33	0.5274	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.664014	1.664014	NA	0.460349	0.326827	NA	0.471	NA	2.536151
1398	7	142124424	142124424	T	G	intergenic	LOC730441,MTRNR2L6	dist=152356;dist=249707	NA	NA	exonic	ENSG00000253534	NA	synonymous SNV	ENSG00000253534:ENST00000390376:exon2:c.A54C:p.P18P	NA	NA	7q34	NA	NA	NA	NA	rs361449	0.9	0.9	0.85	0.885982	0.999	1	0.964	0.5885	0.999	1	1	0.95	0.59	0.965	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.021193	NA	NA	NA	NA	NA	0.833	NA	2.536
1399	6	90453248	90453248	T	C	intronic	MDN1	NA	NA	NA	intronic	ENSG00000112159	NA	NA	NA	NA	NA	6q15	NA	NA	NA	NA	rs2273245	0.66	0.66	0.637	0.605631	0.4622	0.9077	0.7003	0.6006	0.3814	0.48	0.92	0.67	0.62	0.5363	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.316179	NA	NA	0.466512	0.60168	NA	0.507	NA	2.534988
1399	1	19981791	19981791	A	G	intronic	C1orf151-NBL1,NBL1	NA	NA	NA	intronic	ENSG00000158747,ENSG00000270136	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs2294630	0.46	0.46	0.447	0.455871	0.508	0.1677	0.4827	0.6997	0.3507	0.53	0.15	0.49	0.71	0.4761	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.320927	NA	NA	0.481744	0.657512	NA	0.486	NA	2.534156
1399	2	128050134	128050134	T	C	intronic	ERCC3	NA	NA	NA	intronic	ENSG00000163161	NA	NA	NA	NA	NA	2q14.3	NA	NA	NA	NA	rs4150402	0.84	0.84	0.803	0.82488	0.7505	0.999	0.8573	0.7738	0.7679	0.76	1	0.86	0.77	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.406958	NA	NA	0.71547	0.784247	NA	0.667	NA	2.53403
1399	8	72942210	72942210	G	T	ncRNA_intronic	LOC100132891	NA	NA	NA	intronic	ENSG00000104321,ENSG00000235531	NA	NA	NA	NA	NA	8q13.3	NA	NA	NA	NA	rs3824151	0.65	0.65	0.577	0.675919	0.5726	0.6935	0.7536	0.6732	0.7127	0.59	0.7	0.71	0.64	0.6369	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.066811	NA	NA	0.590465	0.653427	NA	0.725	NA	2.5333683
1399	1	200967490	200967490	A	G	intronic	KIF21B	NA	NA	NA	intronic	ENSG00000116852	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs10920089	0.6	0.6	0.577	0.591454	0.4692	0.627	0.4669	0.8722	0.3896	0.46	0.65	0.47	0.85	0.5203	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.096274	NA	NA	0.477326	0.80345	NA	0.594	NA	2.533174
1399	1	1669734	1669734	G	T	intronic	SLC35E2	NA	NA	NA	intronic	ENSG00000215790	NA	NA	NA	NA	NA	1p36.33	NA	NA	NA	NA	rs61777512	0.33	0.33	0.293	0.288339	0.4871	0.3016	0.3127	0.0764	0.3395	0.48	0.32	0.34	0.08	0.4676	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.374913	NA	NA	0.512392	0.137523	NA	0.159	NA	2.532908
1399	14	50750577	50750577	A	G	intronic	L2HGDH	NA	NA	NA	UTR3	ENSG00000087299	ENST00000555610:c.*158T>C	NA	NA	NA	NA	14q21.3	NA	NA	NA	NA	rs12433038	0.51	0.51	0.483	0.504792	0.5447	0.6399	0.4755	0.3623	0.5378	0.54	0.63	0.46	0.34	0.5396	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.304929	NA	NA	0.549884	0.401498	NA	0.355	NA	2.5324827
1399	1	11137778	11137778	C	T	intronic	EXOSC10	NA	NA	NA	intronic	ENSG00000171824	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs2259886	0.59	0.59	0.557	0.533347	0.7416	0.7411	0.7032	0.0598	0.6247	0.75	0.77	0.7	0.08	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.795121	NA	NA	0.725959	0.164017	NA	0.551	NA	2.532441
1399	19	10265248	10265248	T	C	intronic	DNMT1	NA	NA	NA	intronic	ENSG00000130816	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs2114724	0.54	0.54	0.495	0.533347	0.4612	0.6498	0.4553	0.5159	0.5665	0.46	0.65	0.47	0.56	0.518	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.914084	NA	NA	0.488488	0.487744	NA	0.623	NA	2.532312
1399	22	24122499	24122499	G	A	intronic	MMP11	NA	NA	NA	intronic	ENSG00000099953	NA	NA	NA	NA	NA	22q11.23	NA	NA	NA	NA	rs9612427	0.37	0.37	0.344	0.333866	0.5189	0.3244	0.5447	0.0681	0.363	0.51	0.35	0.52	0.08	0.4398	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.378595	NA	NA	0.510116	0.137602	NA	0.304	NA	2.531184
1399	20	33037336	33037336	C	T	intronic	ITCH	NA	NA	NA	intronic	ENSG00000078747	NA	NA	NA	NA	NA	20q11.22	NA	NA	NA	NA	rs3736762	0.42	0.42	0.406	0.393171	0.504	0.4038	0.3069	0.3419	0.3988	0.53	0.41	0.37	0.3	0.463	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.762625	NA	NA	0.502209	0.366319	NA	0.435	NA	2.530791
1399	8	72962985	72962985	G	A	ncRNA_intronic	LOC100132891	NA	NA	NA	intronic	ENSG00000104321,ENSG00000235531	NA	NA	NA	NA	NA	8q13.3	NA	NA	NA	NA	rs2120474	0.65	0.65	0.615	0.677915	0.5726	0.6935	0.7536	0.68	0.7137	0.59	0.7	0.71	0.64	0.6389	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.464468	NA	NA	0.591047	0.657512	NA	0.725	NA	2.5307863
1399	4	9785134	9785134	T	C	UTR3	DRD5	NM_000798:c.*47T>C	NA	NA	UTR3	ENSG00000169676	ENST00000304374:c.*47T>C	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs1967551	0.46	0.46	0.431	0.425519	0.5815	0.3254	0.5058	0.3411	0.4254	0.6	0.35	0.54	0.32	0.5709	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.254104	NA	NA	0.650246	0.410069	NA	0.145	NA	2.5306874
1399	10	26310410	26310410	T	C	intronic	MYO3A	NA	NA	NA	intronic	ENSG00000095777	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs3737275	0.48	0.48	0.46	0.469449	0.501	0.6181	0.4769	0.2481	0.5777	0.51	0.62	0.46	0.27	0.5001	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.132826	NA	NA	0.468372	0.298003	NA	0.333	NA	2.530528
1399	4	54362150	54362150	G	A	intronic	LNX1	NA	NA	NA	intronic	ENSG00000072201,ENSG00000145216	NA	NA	NA	NA	NA	4q12	NA	NA	NA	NA	rs6836800	0.39	0.39	0.386	0.329872	0.5149	0.3423	0.5029	0.1717	0.2178	0.53	0.36	0.46	0.18	0.448	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.33927	NA	NA	0.506628	0.24217	NA	0.341	NA	2.530472
1399	11	113264511	113264511	C	G	intronic	ANKK1	NA	NA	NA	intronic	ENSG00000170209	NA	NA	NA	NA	NA	11q23.2	NA	NA	NA	NA	rs11214596	0.26	0.26	0.253	0.233027	0.5308	0.0655	0.3098	0.0303	0.319	0.53	0.06	0.36	0.03	0.412	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.155274	NA	NA	0.526908	0.122121	NA	0.181	NA	2.530292
1399	18	21119291	21119291	A	G	intronic	NPC1	NA	NA	NA	intronic	ENSG00000141458	NA	NA	NA	NA	NA	18q11.2	NA	NA	NA	NA	rs6507720	0.59	0.59	0.575	0.58766	0.4583	0.6111	0.6311	0.7337	0.4683	0.47	0.64	0.58	0.72	0.5398	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.19085	NA	NA	0.47186	0.697458	NA	0.638	NA	2.53004
1399	19	20976742	20976742	A	G	intergenic	ZNF626,ZNF85	dist=132340;dist=129317	NA	NA	UTR3	ENSG00000160229	ENST00000360204:c.*44A>G	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs1808542	0.63	0.63	0.604	0.612021	0.6581	0.5913	0.5447	0.6218	0.6207	0.68	0.61	0.57	0.62	0.6458	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.273471	NA	NA	NA	NA	NA	0.674	NA	2.5294334
1399	11	6807243	6807243	G	A	UTR3	OR2AG1	NM_001004489:c.*24G>A	NA	NA	UTR3	ENSG00000170803	ENST00000307401:c.*24G>A	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs497681	0.59	0.59	0.567	0.565895	0.6312	0.6329	0.4928	0.534	0.5245	0.63	0.65	0.52	0.5	0.5763	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.23422	NA	NA	0.596834	0.544525	NA	0.572	NA	2.5289994
1399	5	52370174	52370174	G	A	intronic	ITGA2	NA	NA	NA	intronic	ENSG00000164171	NA	NA	NA	NA	NA	5q11.2	NA	NA	NA	NA	rs3212591	0.47	0.47	0.479	0.444888	0.496	0.3175	0.5086	0.4894	0.4182	0.51	0.36	0.5	0.52	0.4769	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.135326	NA	NA	0.498372	0.495007	NA	0.543	NA	2.528728
1399	6	160207049	160207049	T	C	intronic	TCP1	NA	NA	NA	UTR3	ENSG00000120438	ENST00000538530:c.*116A>G	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs2273828	0.36	0.36	0.33	0.364018	0.5427	0.1637	0.5965	0.1657	0.4898	0.55	0.15	0.57	0.17	0.5226	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.492994	NA	NA	0.573605	0.218764	NA	0.312	NA	2.5277617
1399	10	27475494	27475494	T	C	UTR3	MASTL	NM_032844:c.*29T>C,NM_001172303:c.*29T>C,NM_001172304:c.*29T>C	NA	NA	UTR3	ENSG00000120539	ENST00000375946:c.*29T>C,ENST00000342386:c.*29T>C,ENST00000375940:c.*29T>C	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs10764686	0.43	0.43	0.404	0.39996	0.6014	0.4563	0.4942	0.1309	0.4315	0.59	0.41	0.52	0.15	0.5588	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.621783	2.621783	NA	0.645581	0.218566	NA	0.399	NA	2.5275524
1399	6	89895207	89895207	G	A	intronic	GABRR1	NA	NA	NA	intronic	ENSG00000146276	NA	NA	NA	NA	NA	6q15	NA	NA	NA	NA	rs364936	0.4	0.4	0.396	0.354233	0.508	0.3075	0.464	0.2126	0.3579	0.52	0.34	0.49	0.25	0.4534	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.928453	1.928453	NA	0.511744	0.28552	NA	0.413	NA	2.526856
1399	16	77775459	77775459	G	A	intronic	NUDT7	NA	NA	NA	ncRNA_exonic	ENSG00000261707	NA	NA	NA	NA	NA	16q23.1	NA	NA	NA	NA	rs11648791	0.47	0.47	0.455	0.436901	0.5905	0.374	0.4957	0.3313	0.4448	0.6	0.37	0.52	0.35	0.5732	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.075412	NA	NA	0.643328	0.380032	NA	0.413	NA	2.5263053
1399	6	89895202	89895202	G	A	intronic	GABRR1	NA	NA	NA	intronic	ENSG00000146276	NA	NA	NA	NA	NA	6q15	NA	NA	NA	NA	rs406462	0.4	0.4	0.389	0.354433	0.508	0.3075	0.464	0.2126	0.3589	0.52	0.34	0.49	0.25	0.4534	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.554183	NA	NA	0.512442	0.28552	NA	0.413	NA	2.526158
1399	14	74874707	74874707	A	G	intronic	SYNDIG1L	NA	NA	NA	intronic	ENSG00000183379	NA	NA	NA	NA	NA	14q24.3	NA	NA	NA	NA	rs2884545	0.47	0.47	0.448	0.450879	0.495	0.4097	0.4207	0.4622	0.454	0.51	0.43	0.46	0.47	0.4781	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.224774	NA	NA	0.501279	0.460718	ID=COSN164738;OCCURENCE=1(NS)	0.428	NA	2.525621
1399	7	142139272	142139272	G	A	intergenic	LOC730441,MTRNR2L6	dist=167204;dist=234859	NA	NA	downstream	ENSG00000211727	NA	NA	NA	NA	NA	7q34	Score=699;Name=V$PPARG_02	NA	NA	NA	rs138227832	0.67	0.67	0.901	0.994808	1	1	1	0.9803	1	0.65	0.72	0.67	0.62	0.9745	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.195783	NA	NA	NA	NA	NA	NA	NA	2.5255
1399	20	25190598	25190598	A	G	intronic	ENTPD6	NA	NA	NA	intronic	ENSG00000197586	NA	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	rs1007707	0.64	0.64	0.655	0.632188	0.4861	0.9107	0.3818	0.7345	0.5348	0.49	0.92	0.43	0.71	0.5139	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.286583	NA	NA	0.474535	0.68384	NA	0.572	NA	2.525465
1399	7	142139271	142139271	T	C	intergenic	LOC730441,MTRNR2L6	dist=167203;dist=234860	NA	NA	downstream	ENSG00000211727	NA	NA	NA	NA	NA	7q34	Score=699;Name=V$PPARG_02	NA	NA	NA	rs146977487	0.67	0.67	0.907	0.994808	1	1	1	0.9803	1	0.66	0.71	0.67	0.63	0.9747	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.683943	NA	NA	NA	NA	NA	NA	NA	2.5253
1399	19	39924129	39924129	T	C	intronic	RPS16	NA	NA	NA	UTR3	ENSG00000105193	ENST00000602153:c.*25A>G	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs566130	0.6	0.6	0.624	0.654553	0.5547	0.5873	0.5274	0.8563	0.6442	0.56	0.53	0.54	0.81	0.5721	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.090668	NA	NA	0.514767	0.805266	NA	0.558	NA	2.5250997
1399	17	7193255	7193255	G	A	intronic	YBX2	NA	NA	NA	intronic	ENSG00000006047	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs3744405	0.39	0.39	0.35	0.363219	0.498	0.3373	0.4452	0.264	0.3272	0.48	0.34	0.49	0.24	0.4538	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.876301	NA	NA	0.523156	0.299227	NA	0.348	NA	2.525044
1400	14	23856896	23856896	A	G	intronic	MYH6	NA	NA	NA	intronic	ENSG00000197616	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs178642	0.52	0.52	0.493	0.471645	0.4831	0.6062	0.536	0.41	0.3589	0.5	0.64	0.52	0.43	0.4957	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.121342	2.121342	NA	0.496512	0.411711	ID=COSN164633;OCCURENCE=1(breast)	0.493	NA	2.524688
1400	19	3204172	3204172	A	G	intronic	NCLN	NA	NA	NA	intronic	ENSG00000125912	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs8106438	0.62	0.62	0.585	0.653954	0.4901	0.9147	0.5274	0.6044	0.7106	0.49	0.92	0.52	0.58	0.5368	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.338896	NA	NA	0.448718	0.58849	NA	0.594	NA	2.524382
1400	3	42005734	42005734	C	A	intergenic	ULK4,TRAK1	dist=2074;dist=127012	NA	NA	intergenic	ENSG00000168038,ENSG00000235339	dist=1812;dist=12766	NA	NA	NA	NA	3p22.1	NA	NA	NA	NA	rs12492599	0.7	0.7	0.677	0.683906	0.8091	0.8522	0.8084	0.289	0.8272	0.8	0.84	0.8	0.29	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.676569	NA	NA	NA	NA	NA	0.659	NA	2.5242334
1400	5	168233413	168233413	G	A	intronic	SLIT3	NA	NA	NA	intronic	ENSG00000184347	NA	NA	NA	NA	NA	5q34	NA	NA	NA	NA	rs3797716	0.53	0.53	0.534	0.550719	0.495	0.5942	0.4741	0.6142	0.5317	0.5	0.57	0.48	0.59	0.4967	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.738668	NA	NA	0.484302	0.591012	NA	0.471	NA	2.523998
1400	11	1220967	1220967	C	T	intergenic	MUC2,MUC5B	dist=116550;dist=23328	NA	NA	intergenic	ENSG00000215182,ENSG00000117983	dist=58606;dist=23329	NA	NA	NA	NA	11p15.5	NA	Name=GR	NA	NA	rs1132436	0.56	0.56	0.564	0.492212	0.5944	0.6508	0.5533	0.2943	0.4479	0.59	0.72	0.58	0.3	0.6021	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.781499	NA	NA	0.613182	0.380892	NA	0.428	NA	2.5236514
1400	12	132683690	132683690	G	A	intronic	GALNT9	NA	NA	NA	intronic	ENSG00000182870	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs4074046	0.43	0.43	0.416	0.400359	0.502	0.3998	0.4049	0.3517	0.3589	0.52	0.39	0.4	0.35	0.4657	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.344484	NA	NA	0.509128	0.344793	NA	0.362	NA	2.523172
1400	9	75539077	75539077	G	A	intronic	ALDH1A1	NA	NA	NA	intronic	ENSG00000165092	NA	NA	NA	NA	NA	9q21.13	NA	NA	NA	NA	rs3739962	0.39	0.39	0.358	0.415535	0.503	0.4544	0.4899	0.1831	0.547	0.5	0.38	0.44	0.2	0.4743	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.15611	NA	NA	0.499651	0.258057	NA	0.406	NA	2.523049
1400	16	30495412	30495412	T	C	intronic	ITGAL	NA	NA	NA	ncRNA_intronic	ENSG00000261346	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs2285459	0.74	0.74	0.735	0.762979	0.5934	0.9921	0.7666	0.6808	0.8098	0.6	0.99	0.72	0.69	0.6572	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.108792	NA	NA	0.560116	0.656805	NA	0.652	NA	2.5226173
1400	17	75484781	75484781	T	C	intronic	SEPT9	NA	NA	NA	intronic	ENSG00000184640	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs370531	0.56	0.56	0.598	0.558506	0.4811	0.4931	0.4121	0.8411	0.4274	0.48	0.49	0.44	0.85	0.494	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.263553	NA	NA	0.502792	0.777273	NA	0.471	NA	2.522108
1400	22	29908154	29908154	G	T	intronic	THOC5	NA	NA	NA	intronic	ENSG00000100296	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs2007668	0.52	0.52	0.522	0.445887	0.5129	0.7242	0.379	0.3306	0.2935	0.52	0.73	0.41	0.37	0.4628	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.906465	NA	NA	0.502326	0.353382	NA	0.543	NA	2.521974
1400	6	51913240	51913240	G	A	intronic	PKHD1	NA	NA	NA	intronic	ENSG00000170927	NA	NA	NA	NA	NA	6p12.2	NA	NA	NA	NA	rs10948667	0.41	0.41	0.348	0.355631	0.503	0.4048	0.6009	0.1089	0.3129	0.51	0.41	0.59	0.13	0.4649	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.463022	NA	NA	0.510465	0.151158	NA	0.471	NA	2.521635
1400	7	138713715	138713715	G	C	intronic	ZC3HAV1L	NA	NA	NA	intronic	ENSG00000146858	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs11767739	0.39	0.39	0.388	0.373602	0.504	0.2262	0.3357	0.3828	0.4059	0.5	0.23	0.38	0.4	0.4537	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.234884	3.234884	NA	0.521047	0.413073	NA	0.348	NA	2.521253
1400	9	90586043	90586043	G	A	intronic	CDK20	NA	NA	NA	intronic	ENSG00000156345	NA	NA	NA	NA	NA	9q22.1	NA	NA	NA	NA	rs622418	0.33	0.33	0.324	0.32488	0.5109	0.1776	0.3429	0.1868	0.4591	0.51	0.19	0.35	0.19	0.4531	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.017387	NA	NA	0.515	0.230822	NA	0.42	NA	2.521
1400	19	57743039	57743039	T	C	intronic	AURKC	NA	NA	NA	UTR5;UTR3	ENSG00000105146;ENSG00000105146	ENST00000598785:c.-115T>C;ENST00000601799:c.*282T>C	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs758098	0.87	0.87	0.862	0.868011	0.833	0.8502	0.8588	0.9372	0.8354	0.84	0.88	0.88	0.92	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.52833	NA	NA	0.814896	0.930636	NA	0.797	NA	2.5187707
1400	16	57073683	57073683	G	C	intronic	NLRC5	NA	NA	NA	intronic	ENSG00000140853	NA	NA	NA	NA	NA	16q13	NA	NA	Name=7	NA	rs864750	0.88	0.88	0.893	0.868411	0.834	0.9385	0.83	0.9342	0.7699	0.83	0.94	0.83	0.94	0.8324	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.195946	NA	NA	0.815233	0.917652	NA	0.949	NA	2.518367
1400	3	37150988	37150988	C	G	intronic	LRRFIP2	NA	NA	NA	intronic	ENSG00000093167	NA	NA	NA	NA	NA	3p22.2	NA	NA	NA	NA	rs6806252	0.46	0.46	0.464	0.421725	0.506	0.13	0.4524	0.6989	0.2393	0.51	0.13	0.52	0.7	0.4496	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.07117	NA	NA	0.52686	0.649342	NA	0.543	NA	2.51754
1400	12	123335488	123335488	G	A	intronic	HIP1R	NA	NA	NA	intronic	ENSG00000130787	NA	NA	NA	NA	NA	12q24.31	NA	NA	Name=72	NA	rs2271049	0.79	0.79	0.767	0.767572	0.825	0.752	0.8948	0.7254	0.6912	0.83	0.74	0.89	0.74	0.8091	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.208828	2.208828	NA	0.848918	0.756468	NA	0.783	NA	2.516982
1400	12	27066350	27066350	C	T	intronic	ASUN	NA	NA	NA	intronic	ENSG00000064102	NA	NA	NA	NA	NA	12p11.23	NA	NA	NA	NA	rs3736227	0.57	0.57	0.559	0.579273	0.492	0.7609	0.4366	0.5514	0.6207	0.49	0.78	0.44	0.54	0.5182	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.315792	NA	NA	0.473133	0.514526	NA	0.522	NA	2.516667
1400	10	12292344	12292344	A	G	UTR3	CDC123	NM_006023:c.*8A>G	NA	NA	UTR3	ENSG00000151465	ENST00000281141:c.*8A>G,ENST00000378900:c.*8A>G,ENST00000440613:c.*8A>G	NA	NA	NA	NA	10p13	NA	NA	NA	NA	rs10951	0.67	0.67	0.685	0.652556	0.5974	0.6062	0.6052	0.7292	0.6871	0.6	0.69	0.66	0.74	0.6213	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.092109	NA	NA	0.598256	0.687018	NA	0.587	NA	2.5163774
1400	6	160468383	160468383	T	C	intronic	IGF2R	NA	NA	NA	intronic	ENSG00000197081	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs998074	0.57	0.57	0.559	0.573083	0.4841	0.6925	0.4885	0.6203	0.5378	0.49	0.71	0.48	0.59	0.5357	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.587255	NA	NA	0.464651	0.592601	NA	0.681	NA	2.515549
1400	5	35033706	35033706	T	C	intronic	AGXT2	NA	NA	NA	intronic	ENSG00000113492	NA	NA	NA	NA	NA	5p13.2	NA	NA	NA	NA	rs2291702	0.48	0.48	0.462	0.493011	0.4891	0.6726	0.5605	0.1982	0.6626	0.49	0.69	0.5	0.18	0.5118	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.28377	4.28377	NA	0.483605	0.261008	NA	0.42	NA	2.515495
1401	10	112764594	112764594	T	C	intronic	SHOC2	NA	NA	NA	intronic	ENSG00000108061	NA	NA	NA	NA	NA	10q25.2	NA	NA	NA	NA	rs1980869	0.83	0.83	0.815	0.843251	0.832	0.8442	0.9193	0.8336	0.8129	0.83	0.84	0.89	0.79	0.8348	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.474511	NA	NA	0.81905	0.829385	NA	0.761	CLINSIG=non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000034336.2;CLNDSDB=.;CLNDSDBID=.	2.51415
1401	21	38462614	38462614	A	G	intronic	TTC3	NA	NA	NA	intronic	ENSG00000182670	NA	NA	NA	NA	NA	21q22.13	NA	NA	NA	NA	rs3787780	0.41	0.41	0.43	0.395767	0.5139	0.3611	0.3804	0.3472	0.3865	0.52	0.33	0.4	0.35	0.4537	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.764262	NA	NA	0.518372	0.364896	NA	0.319	NA	2.514028
1401	3	8932189	8932189	C	T	intronic	RAD18	NA	NA	NA	intronic	ENSG00000070950	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs607531	0.52	0.52	0.5	0.522564	0.7584	0.3591	0.6729	0.2141	0.7587	0.76	0.4	0.64	0.22	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.233142	1.233142	NA	0.727673	0.302023	NA	0.572	NA	2.513927
1401	1	25889672	25889672	G	A	intronic	LDLRAP1	NA	NA	NA	intronic	ENSG00000157978	NA	NA	NA	NA	NA	1p36.11	NA	NA	NA	NA	rs6688931	0.45	0.45	0.415	0.416534	0.494	0.4415	0.4928	0.2844	0.4356	0.49	0.51	0.46	0.3	0.4817	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.766593	NA	NA	0.51152	0.320245	NA	0.232	NA	2.51278
1401	18	43703223	43703223	C	G	intronic	HAUS1	NA	NA	NA	intronic	ENSG00000152240	NA	NA	NA	NA	NA	18q21.1	NA	NA	NA	NA	rs12954742	0.48	0.48	0.482	0.459665	0.4881	0.4554	0.451	0.4395	0.4683	0.48	0.5	0.47	0.45	0.4918	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.098927	NA	NA	0.507558	0.468679	ID=COSN165653;OCCURENCE=1(breast)	0.594	NA	2.512542
1401	2	1488668	1488668	T	C	intronic	TPO	NA	NA	NA	intronic	ENSG00000115705	NA	NA	NA	NA	NA	2p25.3	NA	NA	NA	NA	rs6715129	0.56	0.56	0.57	0.597045	0.492	0.4901	0.5216	0.7474	0.6656	0.48	0.53	0.52	0.75	0.5173	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.670116	NA	NA	0.478921	0.69075	NA	0.609	NA	2.511779
1401	10	118355695	118355695	A	T	intronic	PNLIPRP1	NA	NA	NA	intronic	ENSG00000187021	NA	NA	NA	NA	NA	10q25.3	NA	NA	NA	NA	rs2915765	0.36	0.36	0.332	0.352636	0.507	0.1776	0.549	0.1815	0.4663	0.5	0.18	0.54	0.22	0.4699	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.720331	NA	NA	0.511628	0.234453	NA	0.37	NA	2.511472
1401	19	6744762	6744762	A	C	intronic	TRIP10	NA	NA	NA	intronic	ENSG00000125733	NA	NA	NA	NA	NA	19p13.3	NA	NA	Name=33	NA	rs339405	0.81	0.81	0.812	0.779353	0.8419	0.7421	0.8256	0.8457	0.6309	0.82	0.77	0.81	0.84	0.808	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.502373	NA	NA	0.83907	0.835225	NA	0.826	NA	2.51103
1401	22	27021425	27021425	A	G	intronic	CRYBA4	NA	NA	NA	intronic	ENSG00000196431	NA	NA	NA	NA	NA	22q12.1	NA	NA	NA	NA	rs4276	0.58	0.58	0.62	0.588259	0.495	0.6359	0.3991	0.7988	0.4847	0.49	0.65	0.41	0.78	0.5149	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.173894	NA	NA	0.479651	0.750113	NA	0.558	NA	2.510449
1401	6	17834328	17834328	G	A	intronic	KIF13A	NA	NA	NA	intronic	ENSG00000137177	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs4716192	0.43	0.43	0.379	0.435703	0.496	0.4038	0.513	0.2943	0.5429	0.49	0.4	0.48	0.31	0.5095	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.991591	1.991591	NA	0.48444	0.329221	NA	0.514	NA	2.51006
1401	14	92336775	92336775	T	C	intronic	FBLN5	NA	NA	NA	intronic	ENSG00000140092	NA	NA	NA	NA	NA	14q32.12	NA	NA	NA	NA	rs929608	0.48	0.48	0.44	0.458267	0.5099	0.6548	0.4597	0.2035	0.546	0.5	0.65	0.51	0.22	0.4909	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.03686	NA	NA	0.489186	0.258057	NA	0.384	NA	2.510014
1401	3	96387023	96387023	C	T	intergenic	LOC100287639,EPHA6	dist=984986;dist=146402	NA	NA	intergenic	ENSG00000212031,ENSG00000241018	dist=1900;dist=85006	NA	NA	NA	NA	3q11.2	NA	NA	NA	NA	rs3966829	0.84	0.84	0.815	0.84405	0.8241	0.9702	0.8746	0.6936	0.9162	0.81	0.96	0.87	0.7	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.290774	NA	NA	NA	NA	NA	0.703	NA	2.5092334
1401	3	96387449	96387449	T	C	intergenic	LOC100287639,EPHA6	dist=985412;dist=145976	NA	NA	intergenic	ENSG00000212031,ENSG00000241018	dist=2326;dist=84580	NA	NA	NA	NA	3q11.2	NA	NA	NA	NA	rs3884655	0.84	0.84	0.824	0.844249	0.8241	0.9702	0.8746	0.6936	0.9172	0.81	0.96	0.87	0.7	NA	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.871362	NA	NA	NA	NA	NA	0.732	NA	2.5092334
1401	3	182913092	182913092	T	G	intronic	MCF2L2	NA	NA	NA	intronic	ENSG00000053524	NA	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs577136	0.45	0.45	0.442	0.450879	0.4851	0.4107	0.4366	0.4123	0.5194	0.49	0.46	0.45	0.4	0.4828	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.091816	NA	NA	0.522923	0.446161	ID=COSN167098;OCCURENCE=1(large_intestine)	0.399	NA	2.509177
1401	5	169697707	169697707	G	A	intronic	LCP2	NA	NA	NA	intronic	ENSG00000043462	NA	NA	NA	NA	NA	5q35.1	NA	NA	NA	NA	rs315745	0.57	0.57	0.569	0.582668	0.4583	0.8552	0.572	0.4924	0.5593	0.47	0.85	0.53	0.44	0.5523	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.989785	NA	NA	0.480765	0.47894	NA	0.594	NA	2.508635
1401	6	51944847	51944847	T	C	intronic	PKHD1	NA	NA	NA	intronic	ENSG00000170927	NA	NA	NA	NA	NA	6p12.2	NA	NA	NA	NA	rs1892274	0.43	0.43	0.376	0.380591	0.507	0.4008	0.6081	0.202	0.3098	0.52	0.41	0.6	0.21	0.4742	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.141649	NA	NA	0.510465	0.239673	NA	0.529	NA	2.508335
1401	11	34680053	34680053	G	A	intronic	EHF	NA	NA	NA	intronic	ENSG00000135373	NA	NA	NA	NA	NA	11p13	NA	NA	NA	NA	rs3818514	0.33	0.33	0.347	0.297923	0.5328	0.129	0.3184	0.1815	0.3732	0.55	0.15	0.34	0.21	0.4311	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.803918	NA	NA	0.528269	0.245686	NA	0.29	NA	2.507831
1401	18	50917982	50917982	C	T	intronic	DCC	NA	NA	NA	intronic	ENSG00000187323	NA	NA	NA	NA	NA	18q21.2	NA	NA	NA	NA	rs12604262	0.34	0.34	0.331	0.302915	0.5268	0.2212	0.2925	0.1725	0.3405	0.52	0.22	0.35	0.18	0.4439	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.814285	NA	NA	0.522274	0.230804	NA	0.362	NA	2.507026
1401	6	90371986	90371986	C	T	intronic	MDN1	NA	NA	NA	intronic	ENSG00000112159	NA	NA	NA	NA	NA	6q15	NA	NA	NA	NA	rs3818132	0.66	0.66	0.64	0.607428	0.4742	0.9087	0.7032	0.5938	0.3845	0.49	0.92	0.67	0.61	0.5391	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.073646	NA	NA	0.479767	0.595778	NA	0.507	NA	2.506933
1401	3	157146307	157146307	A	T	intronic	VEPH1	NA	NA	NA	intronic	ENSG00000197415	NA	NA	NA	NA	NA	3q25.32	NA	NA	NA	NA	rs1456099	0.45	0.45	0.393	0.418131	0.508	0.4752	0.6239	0.2352	0.3681	0.5	0.48	0.59	0.22	0.477	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.462884	NA	NA	0.508488	0.285974	NA	0.399	NA	2.506512
1401	8	17928920	17928920	T	C	intronic	ASAH1	NA	NA	NA	intronic	ENSG00000104763	NA	NA	NA	NA	NA	8p22	NA	NA	NA	NA	rs12547845	0.43	0.43	0.382	0.420327	0.4761	0.373	0.5735	0.2496	0.5337	0.47	0.36	0.6	0.3	0.5244	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.551035	NA	NA	0.493022	0.288697	NA	0.355	NA	2.506478
1401	19	21045824	21045824	C	T	intergenic	ZNF626,ZNF85	dist=201422;dist=60235	NA	NA	intergenic	ENSG00000269373,ENSG00000105750	dist=15601;dist=60204	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs2545229	0.76	0.76	0.741	0.74361	0.827	0.7004	0.6945	0.6793	0.8241	0.86	0.73	0.71	0.68	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.565072	NA	NA	NA	NA	NA	0.79	NA	2.5063334
1401	15	45424286	45424286	C	G	intronic	DUOX1	NA	NA	NA	intronic	ENSG00000137857	NA	NA	NA	NA	NA	15q21.1	NA	NA	NA	NA	rs1706810	0.53	0.53	0.468	0.491813	0.7406	0.6002	0.6628	0.1233	0.501	0.75	0.53	0.62	0.13	NA	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.152079	NA	NA	0.753619	0.226346	NA	0.522	NA	2.505781
1402	12	75687185	75687185	G	A	intronic	CAPS2	NA	NA	NA	ncRNA_intronic	ENSG00000254451	NA	NA	NA	NA	NA	12q21.1	NA	NA	NA	NA	rs7967562	0.62	0.62	0.606	0.625799	0.5954	0.7073	0.6383	0.4781	0.7638	0.6	0.73	0.64	0.5	0.6262	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.000029	NA	NA	0.607351	0.493191	NA	0.449	NA	2.5043823
1402	8	49176272	49176272	A	G	intergenic	UBE2V2,EFCAB1	dist=201818;dist=451202	NA	NA	intergenic	ENSG00000253843,ENSG00000253654	dist=69085;dist=30314	NA	NA	NA	NA	8q11.21	NA	NA	NA	NA	rs7841194	0.74	0.74	0.712	0.705272	0.829	0.7589	0.8746	0.5189	0.6544	0.82	0.8	0.84	0.5	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.049093	NA	NA	NA	NA	NA	0.768	NA	2.5043334
1402	12	347068	347068	T	A	intronic	SLC6A13	NA	NA	NA	intronic	ENSG00000010379	NA	NA	NA	NA	NA	12p13.33	NA	NA	NA	NA	rs2289957	0.3	0.3	0.292	0.252995	0.5467	0.1012	0.2824	0.0719	0.3313	0.57	0.12	0.33	0.08	0.4151	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.13613	NA	NA	0.533953	0.14571	NA	0.384	NA	2.504247
1402	2	61021349	61021349	A	G	intronic	PAPOLG	NA	NA	NA	intronic	ENSG00000115421	NA	NA	NA	NA	NA	2p16.1	NA	NA	NA	NA	rs11125855	0.44	0.44	0.439	0.403554	0.5408	0.1468	0.4078	0.5514	0.3241	0.53	0.16	0.49	0.58	0.4622	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.570199	NA	NA	0.493488	0.555429	NA	0.522	NA	2.503512
1402	7	51517349	51517349	C	T	intergenic	COBL,POM121L12	dist=132834;dist=1586000	NA	NA	intergenic	ENSG00000227080,ENSG00000229478	dist=60538;dist=150633	NA	NA	NA	NA	7p12.1	NA	NA	NA	NA	rs9649790	0.71	0.71	0.691	0.708067	0.83	0.6042	0.768	0.5477	0.864	0.83	0.62	0.8	0.59	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.442662	NA	NA	NA	NA	NA	0.645	NA	2.5033334
1402	10	102016268	102016268	G	A	intronic	CWF19L1	NA	NA	NA	intronic	ENSG00000095485	NA	NA	NA	NA	NA	10q24.31	NA	NA	NA	NA	rs2270961	0.56	0.56	0.597	0.538738	0.5179	0.5109	0.4222	0.7738	0.3538	0.52	0.5	0.48	0.74	0.4779	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.812982	2.812982	NA	0.501163	0.716977	ID=COSN163743;OCCURENCE=1(breast)	0.536	NA	2.503037
1402	6	17834316	17834316	T	C	intronic	KIF13A	NA	NA	NA	intronic	ENSG00000137177	NA	NA	NA	NA	NA	6p22.3	NA	NA	NA	NA	rs4716191	0.42	0.42	0.379	0.435104	0.496	0.4018	0.513	0.2935	0.5429	0.49	0.4	0.48	0.3	0.5185	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.752904	1.752904	NA	0.483337	0.330588	NA	0.514	NA	2.502163
1402	19	3645947	3645947	G	A	intronic	PIP5K1C	NA	NA	NA	intronic	ENSG00000186111	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs12460780	0.47	0.47	0.458	0.461661	0.506	0.3631	0.585	0.4909	0.3906	0.5	0.36	0.56	0.51	0.4935	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.452234	NA	NA	0.498372	0.498184	ID=COSN165686;OCCURENCE=1(breast)	0.594	NA	2.502128
1402	6	33659557	33659557	C	T	intronic	ITPR3	NA	NA	NA	intronic	ENSG00000096433	NA	NA	NA	NA	NA	6p21.31	NA	NA	NA	NA	rs2296741	0.53	0.53	0.464	0.550319	0.4831	0.8978	0.5951	0.1195	0.8119	0.49	0.88	0.59	0.13	0.5566	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.644348	NA	NA	0.458488	0.199274	NA	0.5	NA	2.501812
1402	7	101713590	101713590	T	C	intronic	CUX1	NA	NA	NA	intronic	ENSG00000257923	NA	NA	NA	NA	NA	7q22.1	NA	Name=CTCF	NA	NA	rs377612	0.87	0.87	0.868	0.879393	0.8241	0.9911	0.8559	0.8411	0.8896	0.82	0.99	0.83	0.82	0.8528	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.850271	2.850271	NA	0.821628	0.838175	NA	0.913	NA	2.501472
1402	1	23236826	23236826	C	T	intronic	EPHB2	NA	NA	NA	intronic	ENSG00000133216	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs309497	0.5	0.5	0.494	0.512979	0.503	0.2659	0.5346	0.7905	0.3875	0.48	0.26	0.57	0.76	0.4955	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.880093	2.880093	NA	0.500233	0.742624	NA	0.616	NA	2.501267
1402	20	56138040	56138040	G	C	intronic	PCK1	NA	NA	NA	intronic	ENSG00000124253	NA	NA	NA	NA	NA	20q13.31	NA	NA	NA	NA	rs2070755	0.44	0.44	0.41	0.418331	0.5278	0.3115	0.5303	0.379	0.3896	0.53	0.32	0.54	0.37	0.4649	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.100294	NA	NA	0.506047	0.389192	NA	0.464	NA	2.501253
1402	5	147475488	147475488	A	G	intronic	SPINK5	NA	NA	NA	intronic	ENSG00000133710	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs11958432	0.45	0.45	0.408	0.452077	0.4831	0.4802	0.6282	0.2746	0.5061	0.46	0.46	0.6	0.3	0.5097	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.452839	NA	NA	0.506236	0.319579	NA	0.377	NA	2.500964
1402	21	32499473	32499473	A	G	intronic	TIAM1	NA	NA	NA	intronic	ENSG00000156299	NA	NA	NA	NA	NA	21q22.11	NA	NA	NA	NA	rs2070410	0.61	0.61	0.603	0.599042	0.4801	0.6081	0.6354	0.7806	0.4407	0.48	0.6	0.64	0.78	0.5407	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.729582	NA	NA	0.478256	0.711076	NA	0.594	NA	2.500944
1402	1	161565324	161565324	C	T	intronic	FCGR2C	NA	NA	NA	intronic	ENSG00000072694,ENSG00000203747,ENSG00000244682	NA	NA	NA	NA	NA	1q23.3	NA	NA	NA	NA	rs61801822	NA	NA	0.527	0.699081	0.7584	0.7272	0.7983	0.5325	0.7638	NA	NA	NA	NA	0.7411	0.51	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.148269	NA	NA	NA	NA	NA	0.601	NA	2.5005
1402	3	136739406	136739406	C	G	intergenic	IL20RB,SOX14	dist=9480;dist=743728	NA	NA	intergenic	ENSG00000174564,ENSG00000201325	dist=9479;dist=497570	NA	NA	NA	NA	3q22.3	NA	NA	Name=12	NA	rs1385306	0.7	0.7	0.682	0.674121	0.6183	0.9058	0.7219	0.5734	0.5951	0.63	0.88	0.69	0.59	0.6259	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.534592	NA	NA	0.588649	0.573059	NA	0.536	NA	2.5004844
1402	10	105658588	105658588	G	C	intronic	OBFC1	NA	NA	NA	intronic	ENSG00000107960	NA	NA	NA	NA	NA	10q24.33	NA	NA	NA	NA	rs2902639	0.42	0.42	0.415	0.398762	0.5378	0.3413	0.4769	0.2897	0.407	0.54	0.33	0.44	0.32	0.4614	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.236113	NA	NA	0.501047	0.329551	NA	0.297	NA	2.499753
1402	4	9982191	9982191	C	T	intronic	SLC2A9	NA	NA	NA	intronic	ENSG00000109667	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs13115193	0.41	0.41	0.393	0.386182	0.505	0.4177	0.3329	0.1876	0.5378	0.52	0.43	0.38	0.22	0.4742	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.070833	NA	NA	0.522209	0.230368	NA	0.399	NA	2.498591
1402	5	147479991	147479991	C	T	intronic	SPINK5	NA	NA	NA	intronic	ENSG00000133710	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs2303061	0.43	0.43	0.391	0.432907	0.4851	0.4861	0.6167	0.1989	0.5102	0.46	0.46	0.59	0.23	0.5039	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.347697	NA	NA	0.512805	0.250403	NA	0.362	NA	2.498195
1402	20	33057954	33057954	G	C	intronic	ITCH	NA	NA	NA	intronic	ENSG00000078747	NA	NA	NA	NA	NA	20q11.22	NA	NA	NA	NA	rs6059856	0.46	0.46	0.476	0.440895	0.5099	0.4058	0.3199	0.4902	0.4254	0.53	0.42	0.38	0.47	0.4828	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.985796	NA	NA	0.509186	0.496369	NA	0.493	NA	2.498114
1402	2	241830944	241830944	G	T	intronic	C2orf54	NA	NA	NA	intronic	ENSG00000172478	NA	NA	NA	NA	NA	2q37.3	NA	NA	NA	NA	rs10171053	0.51	0.51	0.539	0.523962	0.5179	0.4405	0.3473	0.7685	0.411	0.52	0.38	0.38	0.77	0.4851	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.429595	NA	NA	0.499029	0.73428	NA	0.681	NA	2.497971
1402	15	23000272	23000272	A	G	intronic	CYFIP1	NA	NA	NA	UTR3	ENSG00000068793	ENST00000561263:c.*17A>G	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs999842	0.54	0.54	0.521	0.528754	0.5586	0.6329	0.5058	0.3782	0.6104	0.57	0.64	0.52	0.38	0.5549	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.971297	NA	NA	0.55686	0.391058	NA	0.348	NA	2.4963067
1402	5	147480007	147480007	A	G	intronic	SPINK5	NA	NA	NA	intronic	ENSG00000133710	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs2303062	0.43	0.43	0.377	0.432907	0.4861	0.4851	0.6167	0.1989	0.5102	0.46	0.46	0.59	0.23	0.5057	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.510627	NA	0.11	0.511919	0.251743	NA	0.362	NA	2.496281
1402	9	136509312	136509312	C	T	intronic	DBH	NA	NA	NA	intronic	ENSG00000123454	NA	NA	NA	NA	NA	9q34.2	NA	NA	NA	NA	rs1611125	0.43	0.43	0.453	0.402556	0.5298	0.1399	0.389	0.6074	0.2751	0.53	0.16	0.43	0.6	0.4474	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.926428	NA	NA	0.526977	0.587608	NA	0.543	NA	2.495823
1402	12	53432088	53432088	T	C	intronic	EIF4B	NA	NA	NA	ncRNA_intronic	ENSG00000257337	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs7968918	0.8	0.8	0.765	0.758786	0.9095	0.7946	0.9135	0.472	0.8446	0.9	0.82	0.91	0.53	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.141269	NA	NA	0.928252	0.541135	NA	0.783	NA	2.4955813
1402	7	1131356	1131356	T	C	UTR5	GPER	NM_001505:c.-9T>C,NM_001039966:c.-9T>C,NM_001098201:c.-9T>C	NA	NA	UTR5	ENSG00000164850	ENST00000401670:c.-9T>C,ENST00000397092:c.-9T>C,ENST00000413368:c.-9T>C,ENST00000297469:c.-9T>C,ENST00000397088:c.-9T>C	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs3802141	0.63	0.63	0.638	0.627796	0.5954	0.4375	0.6484	0.8154	0.589	0.6	0.51	0.62	0.82	0.6261	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.776878	NA	NA	0.616395	0.785974	NA	0.674	NA	2.4954384
1402	1	75214390	75214390	G	C	intronic	TYW3	NA	NA	NA	intronic	ENSG00000162623	NA	NA	NA	NA	NA	1p31.1	NA	NA	NA	NA	rs749690	0.28	0.28	0.253	0.226837	0.5437	0.0079	0.4222	0.0756	0.1922	0.52	0.01	0.46	0.12	0.4107	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.071127	NA	NA	0.550233	0.171811	NA	0.261	NA	2.495367
1403	6	89913209	89913209	C	T	splicing	GABRR1	NA	NA	NA	intronic	ENSG00000146276	NA	NA	NA	NA	NA	6q15	NA	NA	NA	NA	rs4590242	0.73	0.73	0.722	0.742013	0.6531	0.9286	0.7896	0.674	0.6994	0.64	0.92	0.75	0.65	0.6974	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.06808	NA	NA	0.654535	0.685429	NA	0.732	NA	2.494965
1403	5	147481018	147481018	G	A	intronic	SPINK5	NA	NA	NA	intronic	ENSG00000133710	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs2303068	0.43	0.43	0.39	0.433107	0.4861	0.4851	0.6167	0.1997	0.5102	0.46	0.46	0.59	0.23	0.5067	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.915753	NA	NA	0.512521	0.252901	NA	0.362	NA	2.494679
1403	5	176334195	176334195	C	T	intronic	UIMC1	NA	NA	NA	intronic	ENSG00000087206	NA	NA	NA	NA	NA	5q35.2	NA	NA	NA	NA	rs2292255	0.57	0.57	0.597	0.590455	0.4901	0.4931	0.438	0.8896	0.498	0.49	0.48	0.41	0.89	0.5247	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-3.091238	NA	NA	0.491161	0.81094	NA	0.58	NA	2.494039
1403	5	43292908	43292908	C	A	intronic	HMGCS1	NA	NA	NA	intronic	ENSG00000112972	NA	NA	NA	NA	NA	5p12	NA	NA	NA	NA	rs55794239	0.37	0.37	0.337	0.360024	0.5308	0.125	0.4611	0.3336	0.3906	0.51	0.16	0.49	0.34	0.4553	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.007354	NA	NA	0.520009	0.358311	NA	0.42	NA	2.493891
1403	9	35060746	35060746	A	G	intronic	VCP	NA	NA	NA	intronic	ENSG00000165280	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs562381	0.69	0.69	0.674	0.691893	0.7515	0.4563	0.8242	0.7292	0.729	0.75	0.5	0.81	0.74	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.462915	NA	NA	0.754646	0.716324	ID=COSN168533;OCCURENCE=1(large_intestine)	0.797	NA	2.493854
1403	15	45433646	45433646	T	G	intronic	DUOX1	NA	NA	NA	intronic	ENSG00000137857	NA	NA	NA	NA	NA	15q21.1	NA	NA	NA	NA	rs1648283	0.31	0.31	0.259	0.282149	0.5249	0.2222	0.4063	0.0477	0.3231	0.55	0.15	0.41	0.05	0.4421	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.649229	NA	NA	0.540368	0.14172	NA	0.333	NA	2.492632
1403	4	108999366	108999366	G	A	intronic	LEF1	NA	NA	NA	intronic	ENSG00000138795	NA	NA	NA	NA	NA	4q25	NA	NA	Name=14	NA	rs4956157	0.77	0.77	0.733	0.751198	0.8419	0.9683	0.8919	0.3359	0.8957	0.85	0.95	0.9	0.33	0.827	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.949085	NA	NA	0.838953	0.40059	NA	0.732	NA	2.492147
1403	16	56686852	56686852	A	G	intronic	MT1B	NA	NA	NA	intronic	ENSG00000169688	NA	NA	NA	NA	NA	16q12.2	NA	NA	NA	NA	rs8047981	0.38	0.38	0.372	0.395168	0.503	0.3185	0.402	0.2859	0.5061	0.51	0.3	0.43	0.26	0.4817	0.52	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.699383	NA	NA	0.523256	0.354186	NA	0.406	NA	2.492044
1403	3	183907032	183907032	G	C	intronic	ABCF3	NA	NA	NA	intronic	ENSG00000145191,ENSG00000161204	NA	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs843344	0.53	0.53	0.523	0.554912	0.4811	0.6022	0.4597	0.6029	0.5849	0.46	0.62	0.46	0.6	0.5241	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.443643	NA	NA	0.502791	0.575352	NA	0.464	NA	2.492009
1403	3	183906515	183906515	T	C	intronic	ABCF3	NA	NA	NA	intronic	ENSG00000145191,ENSG00000161204	NA	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs843345	0.53	0.53	0.495	0.555112	0.4811	0.6022	0.4597	0.6036	0.5849	0.46	0.62	0.46	0.6	0.5253	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.86109	NA	NA	0.501628	0.574898	NA	0.464	NA	2.491972
1403	15	83523368	83523368	C	G	intronic	HOMER2	NA	NA	NA	intronic	ENSG00000103942	NA	NA	NA	NA	NA	15q25.2	NA	NA	NA	NA	rs1256426	0.51	0.51	0.51	0.483227	0.505	0.7361	0.4251	0.2753	0.5225	0.51	0.74	0.46	0.29	0.5148	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.063323	NA	NA	0.488419	0.307309	NA	0.406	NA	2.491781
1403	8	63976754	63976754	A	G	intronic	TTPA	NA	NA	NA	intronic	ENSG00000137561	NA	NA	NA	NA	NA	8q12.3	NA	NA	NA	NA	rs4501570	0.65	0.65	0.661	0.677316	0.4592	0.7619	0.6282	0.8623	0.5992	0.45	0.77	0.61	0.86	0.5937	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.463739	NA	NA	0.455581	0.802906	NA	0.623	NA	2.491519
1403	19	35556281	35556281	G	A	ncRNA_intronic	HPN-AS1	NA	NA	NA	ncRNA_intronic	ENSG00000227392	NA	NA	NA	NA	NA	19q13.12	NA	NA	NA	NA	rs2305745	0.63	0.63	0.62	0.574681	0.7485	0.6528	0.7954	0.3071	0.5204	0.76	0.67	0.75	0.31	0.6873	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.001673	NA	NA	0.740349	0.386972	NA	0.551	NA	2.4905176
1403	19	3207338	3207338	T	C	intronic	NCLN	NA	NA	NA	intronic	ENSG00000125912	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs312068	0.65	0.65	0.617	0.675519	0.493	0.9435	0.5605	0.6203	0.7434	0.49	0.96	0.55	0.61	0.5593	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.244435	NA	NA	0.457442	0.616886	NA	0.616	NA	2.490258
1403	16	16184232	16184232	C	G	intronic	ABCC1	NA	NA	NA	intronic	ENSG00000103222	NA	NA	NA	NA	NA	16p13.11	NA	Name=Pol2	NA	NA	rs2074087	0.82	0.82	0.817	0.792532	0.8429	0.8373	0.7795	0.8177	0.6697	0.84	0.8	0.77	0.84	0.8232	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.228917	NA	NA	0.844044	0.828571	NA	0.862	NA	2.489856
1403	17	79914661	79914661	T	C	intronic	NOTUM	NA	NA	NA	intronic	ENSG00000185269	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs35872546	0.38	0.38	0.369	0.374002	0.5169	0.2093	0.4035	0.3533	0.4039	0.52	0.22	0.43	0.34	0.4681	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.698624	NA	NA	0.525175	0.371357	NA	0.522	NA	2.489825
1403	9	37737283	37737283	A	G	intronic	FRMPD1	NA	NA	NA	intronic	ENSG00000070601,ENSG00000255872	NA	NA	NA	NA	NA	9p13.2	NA	NA	NA	NA	rs2296552	0.52	0.52	0.514	0.533946	0.4801	0.5427	0.585	0.5053	0.5828	0.49	0.54	0.56	0.52	0.5278	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.579538	1.579538	NA	0.502442	0.499319	NA	0.42	NA	2.489658
1403	1	6636461	6636461	C	T	intronic	TAS1R1	NA	NA	NA	intronic	ENSG00000173662	NA	NA	NA	NA	NA	1p36.31	NA	NA	NA	NA	rs17492553	0.42	0.42	0.404	0.369808	0.5219	0.3472	0.4625	0.2322	0.3569	0.54	0.36	0.47	0.25	0.4731	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.963368	NA	NA	0.516163	0.291875	NA	0.442	NA	2.488837
1403	20	23805832	23805832	G	A	intronic	CST2	NA	NA	NA	intronic	ENSG00000170369	NA	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	rs6036548	0.82	0.82	0.825	0.830072	0.7485	0.9375	0.7262	0.9002	0.7822	0.74	0.93	0.74	0.88	0.7639	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.369578	NA	NA	NA	NA	NA	0.899	NA	2.4876
1403	8	15606182	15606182	G	A	intronic	TUSC3	NA	NA	NA	intronic	ENSG00000104723	NA	NA	NA	NA	NA	8p22	NA	NA	NA	NA	rs7820648	0.58	0.58	0.568	0.553914	0.4851	0.621	0.6354	0.5983	0.4376	0.51	0.65	0.62	0.58	0.5292	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.629322	NA	NA	0.498744	0.5879	NA	0.406	NA	2.486956
1403	17	49567749	49567749	T	C	intergenic	UTP18,CA10	dist=192457;dist=139925	NA	NA	intergenic	ENSG00000267452,ENSG00000187504	dist=44586;dist=12100	NA	NA	NA	NA	17q21.33	NA	NA	NA	NA	rs12603818	0.37	0.37	0.393	0.456669	0.2704	0.2857	0.3804	0.7315	0.5072	0.26	0.29	0.34	0.67	0.3269	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.133986	NA	NA	0.249372	0.627283	NA	0.384	NA	2.4866614
1403	16	90108832	90108832	C	T	ncRNA_intronic	LOC100130015	NA	NA	NA	intronic	ENSG00000141013	NA	NA	NA	NA	NA	16q24.3	NA	NA	NA	NA	rs2241035	0.44	0.44	0.432	0.411941	0.6561	0.3442	0.4539	0.264	0.4008	0.63	0.3	0.51	0.27	0.5318	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.15411	NA	NA	0.659419	0.30141	NA	0.319	NA	2.4860143
1403	3	179472674	179472674	C	T	intronic	USP13	NA	NA	NA	intronic	ENSG00000058056	NA	NA	NA	NA	NA	3q26.33	NA	NA	NA	NA	rs2287240	0.47	0.47	0.441	0.446086	0.496	0.6399	0.4568	0.1846	0.5409	0.5	0.65	0.49	0.18	0.5002	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.453107	NA	NA	0.518023	0.243532	NA	0.42	NA	2.485777
1403	11	74408384	74408384	C	T	intronic	CHRDL2	NA	NA	NA	intronic	ENSG00000054938	NA	NA	NA	NA	NA	11q13.4	NA	Name=ELK4,STAT3,USF2,Pol2,BAF170	NA	NA	rs10751240	0.81	0.81	0.807	0.802117	0.8241	0.7798	0.7291	0.8654	0.7689	0.82	0.8	0.75	0.85	0.8287	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.590557	NA	NA	0.861752	0.842955	NA	0.688	NA	2.485448
1403	9	86256431	86256431	T	A	intronic	IDNK	NA	NA	NA	intronic	ENSG00000148057	NA	NA	NA	NA	NA	9q21.32	NA	NA	NA	NA	rs2811917	0.42	0.42	0.435	0.463858	0.5288	0.0466	0.3948	0.7368	0.5072	0.51	0.03	0.44	0.74	0.4656	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.316899	1.316899	NA	0.520233	0.705175	NA	0.638	NA	2.485367
1403	16	88688832	88688832	A	G	intronic	ZC3H18	NA	NA	NA	intronic	ENSG00000158545	NA	NA	NA	NA	NA	16q24.2	NA	NA	NA	NA	rs3751675	0.48	0.48	0.464	0.487021	0.5089	0.5456	0.3919	0.3517	0.6544	0.51	0.56	0.45	0.39	0.5283	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.536862	NA	NA	0.477765	0.353825	NA	0.551	NA	2.485035
1404	8	68965521	68965521	C	T	intronic	PREX2	NA	NA	NA	intronic	ENSG00000046889	NA	NA	NA	NA	NA	8q13.2	NA	NA	NA	NA	rs10504417	0.52	0.52	0.522	0.544728	0.5239	0.2688	0.4683	0.826	0.5245	0.53	0.28	0.48	0.81	0.5018	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.27457	NA	NA	0.489651	0.770313	NA	0.623	NA	2.484649
1404	11	117299015	117299015	T	C	UTR3	DSCAML1	NM_020693:c.*29A>G	NA	NA	UTR3	ENSG00000177103	ENST00000321322:c.*29A>G,ENST00000527706:c.*29A>G	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs2925768	0.44	0.44	0.439	0.444688	0.6292	0.252	0.4769	0.4304	0.4499	0.61	0.23	0.5	0.39	0.5529	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.902161	NA	NA	0.667105	0.490256	NA	0.152	NA	2.4841284
1404	14	90735707	90735707	A	G	intronic	PSMC1	NA	NA	NA	intronic	ENSG00000100764	NA	NA	NA	NA	NA	14q32.11	NA	NA	NA	NA	rs3742673	0.57	0.57	0.569	0.564696	0.504	0.7232	0.4539	0.5658	0.5409	0.51	0.72	0.47	0.57	0.5119	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.700145	NA	NA	0.500349	0.546284	NA	0.58	NA	2.483751
1404	4	183674577	183674577	G	C	intronic	TENM3	NA	NA	NA	intronic	ENSG00000218336	NA	NA	NA	NA	NA	4q35.1	NA	NA	NA	NA	rs13130747	0.58	0.58	0.584	0.586861	0.4801	0.7153	0.4741	0.6846	0.5123	0.49	0.69	0.5	0.65	0.5392	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.143766	NA	NA	0.497058	0.657104	NA	0.681	NA	2.483642
1404	15	25321029	25321029	C	T	upstream	SNORD116-11	NA	NA	NA	ncRNA_intronic	ENSG00000224078	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs4906699	0.56	0.56	0.55	0.530751	0.5557	0.5427	0.5908	0.5855	0.3763	0.56	0.53	0.63	0.56	0.5552	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.991938	NA	NA	0.572325	0.590753	NA	0.601	NA	2.4834416
1404	21	43531848	43531848	C	T	intronic	UMODL1	NA	NA	NA	intronic	ENSG00000177398	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs220131	0.44	0.44	0.409	0.387181	0.5249	0.505	0.4683	0.1679	0.363	0.56	0.47	0.47	0.2	0.4907	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.201578	NA	NA	0.50167	0.238412	NA	0.435	NA	2.48273
1404	13	75814504	75814504	A	G	ncRNA_exonic	CTAGE11P	NA	NA	NA	upstream	ENSG00000214249	NA	NA	NA	NA	NA	13q22.2	NA	NA	NA	NA	rs1888258	0.79	0.79	0.701	0.798123	0.8459	0.874	0.8401	0.5976	0.9121	0.85	0.85	0.81	0.63	0.8384	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.562555	NA	NA	NA	NA	NA	0.804	NA	2.4823666
1404	11	125514573	125514573	G	A	intronic	CHEK1	NA	NA	NA	intronic	ENSG00000149554	NA	NA	NA	NA	NA	11q24.2	NA	NA	NA	NA	rs521102	0.43	0.43	0.401	0.436102	0.5	0.4058	0.6023	0.2451	0.5419	0.51	0.43	0.56	0.22	0.5059	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.098466	NA	NA	0.512096	0.288732	NA	0.435	NA	2.482004
1404	9	86243933	86243933	G	T	intronic	IDNK	NA	NA	NA	intronic	ENSG00000148057	NA	NA	NA	NA	NA	9q21.32	NA	NA	NA	NA	rs2811905	0.84	0.84	0.859	0.857428	0.7624	0.8879	0.8112	0.9221	0.8691	0.76	0.87	0.83	0.93	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.153997	NA	NA	0.756128	0.898121	NA	0.877	NA	2.481472
1404	3	10280753	10280753	G	A	intronic	IRAK2	NA	NA	NA	intronic	ENSG00000134070	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs11465932	0.39	0.39	0.361	0.383986	0.5388	0.2827	0.5432	0.2284	0.4264	0.53	0.28	0.52	0.21	0.4614	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.389787	NA	NA	0.519419	0.265774	NA	0.536	NA	2.480381
1404	8	19277817	19277817	G	A	intronic	CSGALNACT1	NA	NA	NA	intronic	ENSG00000147408	NA	NA	NA	NA	NA	8p21.3	NA	NA	NA	NA	rs6999786	0.54	0.54	0.494	0.521166	0.492	0.8214	0.6571	0.2458	0.5174	0.49	0.82	0.63	0.25	0.5313	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.881733	NA	NA	0.49686	0.281434	NA	0.42	NA	2.47984
1404	19	45571781	45571781	T	C	intronic	CLASRP	NA	NA	NA	intronic	ENSG00000104859	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs10445571	0.49	0.49	0.482	0.466853	0.508	0.4157	0.438	0.5688	0.3599	0.5	0.41	0.46	0.61	0.4892	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.033255	NA	NA	0.523837	0.529278	NA	0.572	NA	2.478963
1404	14	77932017	77932017	A	C	intronic	AHSA1	NA	NA	NA	intronic	ENSG00000100591	NA	NA	NA	NA	NA	14q24.3	NA	NA	NA	NA	rs7146595	0.51	0.51	0.49	0.479433	0.4871	0.9187	0.513	0.0946	0.5153	0.49	0.92	0.45	0.11	0.5117	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.553874	NA	NA	0.522326	0.165002	NA	0.384	NA	2.478874
1404	14	77934758	77934758	A	G	intronic	AHSA1	NA	NA	NA	intronic	ENSG00000100591	NA	NA	NA	NA	NA	14q24.3	NA	NA	NA	NA	rs4903584	0.51	0.51	0.499	0.479433	0.4871	0.9187	0.513	0.0946	0.5153	0.49	0.92	0.45	0.11	0.5119	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.739898	NA	NA	0.522209	0.164775	NA	0.384	NA	2.478791
1404	2	160114437	160114437	G	A	intronic	WDSUB1	NA	NA	NA	intronic	ENSG00000196151	NA	NA	NA	NA	NA	2q24.2	NA	NA	NA	NA	rs3213715	0.44	0.44	0.451	0.40016	0.5179	0.2738	0.3372	0.5424	0.2618	0.51	0.29	0.37	0.53	0.4599	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.384823	1.384823	NA	0.543837	0.548138	NA	0.514	NA	2.478363
1404	15	101566118	101566118	C	T	intronic	LRRK1	NA	NA	NA	intronic	ENSG00000154237	NA	NA	NA	NA	NA	15q26.3	NA	NA	NA	NA	rs4427776	0.61	0.61	0.598	0.598043	0.7634	0.5188	0.6527	0.3699	0.7791	0.76	0.55	0.66	0.42	NA	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.073138	NA	NA	0.758413	0.425228	NA	0.594	NA	2.478187
1404	4	6578487	6578487	A	G	intronic	MAN2B2	NA	NA	NA	intronic	ENSG00000013288	NA	NA	NA	NA	NA	4p16.1	NA	NA	Name=16	NA	rs4689485	0.84	0.84	0.821	0.821086	0.8529	0.8661	0.8545	0.7322	0.8384	0.86	0.85	0.85	0.77	0.8351	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.141985	NA	NA	0.833837	0.743532	NA	0.717	NA	2.478163
1404	21	38468958	38468958	A	G	intronic	TTC3	NA	NA	NA	intronic	ENSG00000182670	NA	NA	NA	NA	NA	21q22.13	NA	NA	NA	NA	rs2835600	0.42	0.42	0.419	0.40615	0.5258	0.379	0.3818	0.3608	0.3896	0.53	0.36	0.4	0.36	0.467	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.741973	NA	NA	0.529774	0.373921	NA	0.333	NA	2.477426
1404	7	142499762	142499762	A	G	intergenic	PRSS3P2,EPHB6	dist=17363;dist=53030	NA	NA	intronic	ENSG00000211772	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs706	0.33	0.33	0.316	0.284345	0.4414	0.1885	0.3084	0.3147	0.1636	0.45	0.17	0.32	0.34	0.347	0.45	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.652788	NA	NA	0.401188	0.295694	NA	0.384	NA	2.4770787
1404	1	7796641	7796641	A	G	intronic	CAMTA1	NA	NA	NA	intronic	ENSG00000171735	NA	NA	NA	NA	NA	1p36.23	NA	NA	NA	NA	rs2071985	0.54	0.54	0.483	0.526757	0.4821	0.5407	0.6715	0.4743	0.5266	0.48	0.55	0.63	0.52	0.5321	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.744603	NA	NA	0.509302	0.496142	NA	0.457	NA	2.476498
1404	4	7728472	7728472	C	T	intronic	SORCS2	NA	NA	NA	intronic	ENSG00000184985	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs2301746	0.52	0.52	0.493	0.520966	0.5388	0.5893	0.3934	0.497	0.5552	0.52	0.59	0.45	0.49	0.493	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.196592	NA	NA	0.491821	0.477534	NA	0.384	NA	2.476379
1404	14	77880493	77880493	C	T	intronic	NOXRED1	NA	NA	NA	intronic	ENSG00000165555	NA	NA	NA	NA	NA	14q24.3	NA	NA	NA	NA	rs8005759	0.51	0.51	0.478	0.47524	0.4901	0.9206	0.5144	0.0734	0.5164	0.49	0.93	0.46	0.08	0.5114	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.22955	NA	NA	0.522326	0.149342	NA	0.377	NA	2.476174
1404	5	182077	182077	T	A	intronic	PLEKHG4B	NA	NA	NA	intronic	ENSG00000153404	NA	NA	NA	NA	NA	5p15.33	NA	NA	NA	NA	rs4956924	0.34	0.34	0.333	0.353634	0.503	0.2698	0.379	0.1543	0.5378	0.5	0.27	0.39	0.15	0.4742	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.543528	NA	NA	0.54686	0.222197	NA	0.406	NA	2.47594
1404	17	8224133	8224133	T	C	intronic	ARHGEF15	NA	NA	NA	intronic	ENSG00000198844	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs3744646	0.47	0.47	0.483	0.453275	0.5169	0.3254	0.5504	0.4887	0.4029	0.51	0.34	0.54	0.49	0.4974	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.771857	NA	NA	0.509884	0.51271	NA	0.457	NA	2.475816
1405	17	42085972	42085972	C	T	UTR3	NAGS	NM_153006:c.*3C>T	NA	NA	UTR3	ENSG00000161653	ENST00000293404:c.*3C>T,ENST00000589767:c.*3C>T	NA	NA	NA	NA	17q21.31	NA	NA	NA	NA	rs186636	0.48	0.48	0.481	0.475639	0.6441	0.2718	0.5029	0.4009	0.5941	0.65	0.26	0.52	0.43	0.566	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.357667	NA	NA	0.648256	0.424875	NA	0.522	NA	2.4749774
1405	9	136133506	136133506	A	G	exonic	ABO	NA	unknown	UNKNOWN	ncRNA_exonic	ENSG00000175164	NA	NA	NA	NA	NA	9q34.2	NA	NA	NA	NA	rs512770	0.74	0.74	0.737	0.726438	0.8052	0.7113	0.5764	0.7247	0.7699	0.81	0.72	0.64	0.72	0.7604	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.735752	NA	1	0.79285	0.749762	NA	0.819	NA	2.4748833
1405	16	84215314	84215314	T	C	intronic	TAF1C	NA	NA	NA	intronic	ENSG00000103168	NA	NA	NA	NA	NA	16q24.1	NA	NA	NA	NA	rs3815814	0.51	0.51	0.538	0.523962	0.496	0.5704	0.5187	0.469	0.5828	0.49	0.6	0.48	0.48	0.5249	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.503937	NA	NA	0.504651	0.4725	NA	0.428	NA	2.474449
1405	18	50937026	50937026	A	G	intronic	DCC	NA	NA	NA	intronic	ENSG00000187323	NA	NA	NA	NA	NA	18q21.2	NA	NA	NA	NA	rs11873515	0.35	0.35	0.322	0.309904	0.5368	0.2252	0.3127	0.1732	0.3466	0.53	0.23	0.37	0.18	0.4537	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.616934	NA	NA	0.535598	0.241144	NA	0.399	NA	2.473902
1405	18	50936780	50936780	G	A	intronic	DCC	NA	NA	NA	intronic	ENSG00000187323	NA	NA	NA	NA	NA	18q21.2	NA	NA	NA	NA	rs10853631	0.35	0.35	0.321	0.311102	0.5378	0.2302	0.3127	0.1732	0.3466	0.53	0.23	0.37	0.18	0.4524	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.142436	NA	NA	0.53593	0.240808	NA	0.399	NA	2.47387
1405	16	84214837	84214837	G	C	intronic	TAF1C	NA	NA	NA	intronic	ENSG00000103168	NA	NA	NA	NA	NA	16q24.1	NA	NA	NA	NA	rs2303234	0.52	0.52	0.532	0.522165	0.498	0.5665	0.5187	0.4614	0.5859	0.49	0.6	0.48	0.48	0.5241	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.357141	NA	NA	0.504884	0.465682	NA	0.406	NA	2.473016
1405	12	81647471	81647471	T	A	intronic	ACSS3	NA	NA	NA	intronic	ENSG00000111058	NA	NA	NA	NA	NA	12q21.31	NA	NA	NA	NA	rs2400895	0.41	0.41	0.407	0.404153	0.5089	0.2133	0.4308	0.4402	0.4254	0.48	0.24	0.42	0.48	0.4839	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.343823	NA	NA	0.535233	0.45663	NA	0.543	NA	2.471967
1405	7	101196688	101196688	C	T	intronic	COL26A1	NA	NA	NA	intronic	ENSG00000160963	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs13235234	0.36	0.36	0.36	0.372005	0.5477	0.1052	0.3876	0.3646	0.4652	0.55	0.09	0.41	0.36	0.4557	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.796058	NA	NA	0.525012	0.400414	NA	0.536	NA	2.471588
1405	17	28378276	28378276	C	T	intronic	EFCAB5	NA	NA	NA	intronic	ENSG00000176927	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs11653805	0.45	0.45	0.446	0.45607	0.5368	0.2917	0.4323	0.5469	0.4366	0.52	0.29	0.45	0.53	0.4815	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.903805	NA	NA	0.510422	0.578485	NA	0.341	NA	2.471278
1405	14	91642234	91642234	A	G	intronic	C14orf159	NA	NA	NA	intronic	ENSG00000133943	NA	NA	NA	NA	NA	14q32.11	NA	NA	NA	NA	rs2295528	0.49	0.49	0.459	0.449481	0.5318	0.7242	0.5591	0.0651	0.5235	0.53	0.77	0.52	0.07	0.4991	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.500004	NA	NA	0.497907	0.148888	NA	0.304	NA	2.471193
1405	18	40613840	40613840	A	G	intronic	RIT2	NA	NA	NA	intronic	ENSG00000152214	NA	NA	NA	NA	NA	18q12.3	NA	NA	NA	NA	rs12954451	0.37	0.37	0.329	0.332268	0.5398	0.1716	0.3646	0.1921	0.4509	0.55	0.19	0.43	0.25	0.4651	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.938921	NA	NA	0.524075	0.207898	NA	0.326	NA	2.471025
1405	1	67292478	67292478	T	A	intronic	WDR78	NA	NA	NA	intronic	ENSG00000152763	NA	NA	NA	NA	NA	1p31.3	NA	NA	NA	NA	rs36067642	0.45	0.45	0.422	0.46905	0.5239	0.37	0.4524	0.3752	0.6534	0.54	0.35	0.5	0.39	0.4987	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.03565	NA	NA	0.506628	0.374489	NA	0.442	NA	2.470772
1405	11	2215857	2215857	A	T	intergenic	MIR4686,ASCL2	dist=21489;dist=73871	NA	NA	intergenic	ENSG00000265258,ENSG00000183734	dist=21489;dist=73868	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs7950872	0.66	0.66	0.662	0.655751	0.8628	0.8224	0.6902	0.2156	0.8415	0.85	0.78	0.67	0.24	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.475558	NA	NA	NA	NA	NA	NA	NA	2.4705334
1405	18	70532840	70532840	T	G	UTR5	NETO1	NM_138999:c.-8A>C	NA	NA	UTR5	ENSG00000166342	ENST00000299430:c.-8A>C,ENST00000397929:c.-8A>C	NA	NA	NA	NA	18q22.3	NA	NA	NA	NA	rs10164255	0.74	0.74	0.774	0.710863	0.6262	0.877	0.562	0.8116	0.5961	0.63	0.91	0.6	0.78	0.6366	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.422082	1.422082	NA	0.600233	0.777349	NA	0.775	NA	2.4703004
1405	11	31812215	31812215	A	C	intronic	PAX6	NA	NA	NA	intronic	ENSG00000007372	NA	NA	NA	NA	NA	11p13	NA	NA	NA	NA	rs3026393	0.45	0.45	0.433	0.454273	0.5318	0.4583	0.3948	0.3147	0.6012	0.53	0.48	0.41	0.33	0.486	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.020597	NA	NA	0.51198	0.320163	NA	0.391	NA	2.47022
1405	16	84492683	84492683	A	C	intronic	ATP2C2	NA	NA	NA	intronic	ENSG00000064270	NA	NA	NA	NA	NA	16q24.1	NA	NA	NA	NA	rs693552	0.44	0.44	0.425	0.441294	0.5368	0.2996	0.4409	0.5386	0.3579	0.54	0.27	0.47	0.48	0.4826	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.161137	NA	NA	0.510536	0.539376	NA	0.478	NA	2.470064
1405	8	139736933	139736933	C	A	intronic	COL22A1	NA	NA	NA	intronic	ENSG00000169436	NA	NA	NA	NA	NA	8q24.23	NA	NA	NA	NA	rs10112806	0.46	0.46	0.452	0.442492	0.5278	0.2629	0.4553	0.5257	0.4182	0.53	0.27	0.53	0.53	0.4886	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.491593	NA	NA	0.513721	0.524512	NA	0.551	NA	2.469879
1405	17	15973844	15973844	A	T	intronic	NCOR1	NA	NA	NA	intronic	ENSG00000141027	NA	NA	NA	NA	NA	17p12	NA	NA	NA	NA	rs12942295	0.37	0.37	0.339	0.351637	0.5328	0.1528	0.4481	0.3064	0.363	0.53	0.14	0.45	0.33	0.4577	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.57267	2.57267	NA	0.540465	0.345665	NA	0.348	NA	2.469035
1405	3	187416253	187416253	C	T	UTR3	RTP2	NM_001004312:c.*33G>A	NA	NA	UTR3	ENSG00000198471	ENST00000358241:c.*33G>A	NA	NA	NA	NA	3q27.3	NA	NA	NA	NA	rs1523468	0.53	0.53	0.464	0.492013	0.6372	0.7361	0.5634	0.0461	0.6431	0.63	0.77	0.57	0.07	0.6091	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.395517	NA	NA	0.618516	0.152292	NA	0.522	NA	2.4685174
1405	14	77928476	77928476	C	T	intronic	AHSA1	NA	NA	NA	intronic	ENSG00000100591	NA	NA	NA	NA	NA	14q24.3	NA	NA	NA	NA	rs12436593	0.54	0.54	0.518	0.510783	0.4871	0.9177	0.5231	0.2095	0.5143	0.49	0.92	0.47	0.2	0.5225	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.591685	1.591685	NA	0.522326	0.260554	NA	0.428	NA	2.468074
1405	19	41707094	41707094	A	G	intronic	CYP2S1	NA	NA	NA	intronic	ENSG00000167600	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs1628289	0.59	0.59	0.621	0.610623	0.5099	0.5635	0.3876	0.9047	0.5235	0.51	0.53	0.48	0.87	0.5255	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.366985	NA	NA	0.496744	0.835906	NA	0.594	NA	2.467856
1405	15	45556829	45556829	A	G	intronic	SLC28A2	NA	NA	NA	ncRNA_exonic	ENSG00000259520	NA	NA	NA	NA	NA	15q21.1	NA	NA	NA	NA	rs11631021	0.48	0.48	0.481	0.488818	0.6372	0.1181	0.4452	0.6891	0.4785	0.66	0.06	0.49	0.68	0.5603	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.981648	1.981648	NA	0.668101	0.72202	NA	0.601	NA	2.4677323
1405	16	50327462	50327462	G	A	intronic	ADCY7	NA	NA	NA	intronic	ENSG00000121281	NA	NA	NA	NA	NA	16q12.1	NA	NA	NA	NA	rs2302714	0.4	0.4	0.368	0.375399	0.5209	0.1845	0.4452	0.3828	0.363	0.51	0.18	0.46	0.45	0.4723	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.616973	NA	NA	0.53966	0.399636	NA	0.355	NA	2.46714
1405	20	36965617	36965617	A	G	UTR3	BPI	NM_001725:c.*31A>G	NA	NA	UTR3	ENSG00000101425	ENST00000262865:c.*31A>G,ENST00000417318:c.*31A>G	NA	NA	NA	NA	20q11.23	NA	NA	NA	NA	rs1131847	0.62	0.62	0.633	0.652356	0.6143	0.5486	0.5937	0.7905	0.6534	0.62	0.53	0.57	0.77	0.6237	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.345547	NA	NA	0.628837	0.766001	NA	0.507	NA	2.4664964
1405	15	42175507	42175507	T	C	intronic	SPTBN5	NA	NA	NA	intronic	ENSG00000137877	NA	NA	NA	NA	NA	15q15.1	NA	NA	Name=5	NA	rs1197692	0.89	0.89	0.895	0.870807	0.8439	0.9702	0.8847	0.8661	0.7924	0.85	0.98	0.89	0.84	0.8528	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.75027	NA	NA	0.838172	0.86544	NA	0.87	NA	2.465128
1405	19	10251747	10251747	A	G	intronic	DNMT1	NA	NA	NA	intronic	ENSG00000130816	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs2290684	0.47	0.47	0.469	0.471645	0.5398	0.3542	0.5432	0.4811	0.4591	0.54	0.35	0.53	0.44	0.4838	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.03775	NA	NA	0.511395	0.504085	NA	0.384	NA	2.465005
1406	4	39343940	39343940	C	A	intronic	RFC1	NA	NA	NA	intronic	ENSG00000035928	NA	NA	NA	NA	NA	4p14	NA	NA	NA	NA	rs2306596	0.46	0.46	0.422	0.440096	0.496	0.621	0.5865	0.0514	0.6176	0.51	0.65	0.6	0.07	0.5143	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.611531	NA	NA	0.525349	0.142079	NA	0.457	NA	2.464351
1406	22	39445380	39445380	G	A	intronic	APOBEC3F	NA	NA	NA	intronic	ENSG00000128394,ENSG00000239713	NA	NA	NA	NA	NA	22q13.1	NA	NA	NA	NA	rs2014881	0.5	0.5	0.474	0.496206	0.4901	0.7113	0.6182	0.1899	0.6084	0.47	0.71	0.65	0.2	0.5158	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.920599	NA	NA	0.529767	0.250113	NA	0.442	NA	2.464333
1406	9	90062823	90062823	A	G	intergenic	C9orf170,DAPK1	dist=288182;dist=49933	NA	NA	intergenic	ENSG00000228373,ENSG00000196730	dist=24015;dist=49320	NA	NA	NA	NA	9q21.33	NA	Name=USF1_(SC-8983),GATA-1,eGFP-GATA2	NA	NA	rs12682834	0.61	0.61	0.572	0.636781	0.6064	0.7242	0.6801	0.4516	0.7975	0.61	0.72	0.65	0.46	0.6466	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.639773	NA	NA	0.616775	0.485731	NA	0.638	NA	2.4635584
1406	3	45748435	45748435	A	G	intronic	SACM1L	NA	NA	NA	intronic	ENSG00000211456	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs2673039	0.37	0.37	0.351	0.314297	0.5616	0.2123	0.428	0.1702	0.2791	0.58	0.19	0.46	0.18	0.443	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.457961	NA	NA	0.53186	0.209033	NA	0.362	NA	2.46354
1406	9	27173180	27173180	C	T	intronic	TEK	NA	NA	NA	intronic	ENSG00000120156	NA	NA	NA	NA	NA	9p21.2	NA	NA	NA	NA	rs666478	0.47	0.47	0.47	0.466853	0.5209	0.2907	0.5476	0.5575	0.4131	0.52	0.28	0.57	0.53	0.4885	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.303534	NA	NA	0.527442	0.545393	NA	0.493	NA	2.463158
1406	13	113891075	113891075	G	A	intronic	CUL4A	NA	NA	NA	intronic	ENSG00000139842	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs2287253	0.7	0.7	0.702	0.649161	0.7654	0.6627	0.634	0.6377	0.5419	0.75	0.68	0.65	0.67	NA	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.364121	NA	NA	0.772156	0.67052	NA	0.703	NA	2.462444
1406	5	147478785	147478785	C	T	intronic	SPINK5	NA	NA	NA	intronic	ENSG00000133710	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs1422991	0.44	0.44	0.385	0.440096	0.4871	0.4831	0.6225	0.2231	0.5112	0.46	0.46	0.59	0.26	0.54	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.648833	NA	NA	0.510941	0.265095	NA	0.37	NA	2.461959
1406	2	242707101	242707101	A	G	intronic	D2HGDH	NA	NA	NA	intronic	ENSG00000180902	NA	NA	NA	NA	NA	2q37.3	NA	NA	NA	NA	rs6756901	0.62	0.62	0.63	0.629992	0.5129	0.6181	0.513	0.9319	0.4376	0.5	0.59	0.51	0.93	0.5294	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.971462	NA	NA	0.495805	0.854678	NA	0.464	NA	2.461895
1406	5	135396669	135396669	T	C	intronic	TGFBI	NA	NA	NA	intronic	ENSG00000120708	NA	NA	NA	NA	NA	5q31.1	NA	NA	NA	NA	rs6880837	0.59	0.59	0.607	0.591054	0.5	0.5933	0.5101	0.7564	0.5164	0.48	0.6	0.53	0.76	0.5383	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.880511	NA	NA	0.50237	0.726874	NA	0.659	NA	2.45933
1406	22	38467784	38467784	G	C	intronic	PICK1	NA	NA	NA	ncRNA_intronic	ENSG00000233739	NA	NA	NA	NA	NA	22q13.1	NA	NA	NA	NA	rs760975	0.71	0.71	0.722	0.722045	0.6054	0.8085	0.6225	0.8812	0.6084	0.62	0.76	0.58	0.89	0.6602	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.2964	NA	NA	0.609419	0.842488	NA	0.594	NA	2.4583143
1406	15	25328715	25328715	T	C	upstream;downstream	SNORD116-17,SNORD116-19;SNORD116-16	NA	NA	NA	ncRNA_intronic	ENSG00000224078	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs3803326	0.61	0.61	0.619	0.588259	0.5626	0.5635	0.6182	0.7443	0.408	0.57	0.55	0.65	0.71	0.5728	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.875507	NA	NA	0.573581	0.716324	NA	0.652	NA	2.4576856
1406	1	26655208	26655208	C	T	intronic	AIM1L	NA	NA	NA	intronic	ENSG00000176092	NA	NA	NA	NA	NA	1p36.11	NA	NA	NA	NA	rs11247916	0.44	0.44	0.449	0.457069	0.5308	0.1825	0.3847	0.6672	0.4315	0.54	0.19	0.4	0.61	0.4883	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.543387	NA	NA	0.523372	0.635497	NA	0.478	NA	2.457528
1406	5	176305466	176305466	T	A	intronic	UNC5A	NA	NA	NA	intronic	ENSG00000113763	NA	NA	NA	NA	NA	5q35.2	NA	NA	NA	NA	rs2304516	0.6	0.6	0.57	NA	NA	NA	NA	NA	NA	0.8	0.59	0.61	0.29	0.7287	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.636696	NA	NA	0.81407	0.342714	NA	0.623	NA	2.45723
1406	18	48326378	48326378	G	T	intronic	MRO	NA	NA	NA	intronic	ENSG00000134042	NA	NA	NA	NA	NA	18q21.2	NA	NA	NA	NA	rs2586778	0.44	0.44	0.431	0.439297	0.5378	0.3631	0.5576	0.27	0.5613	0.54	0.39	0.56	0.25	0.5005	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.78577	NA	NA	0.504535	0.315706	NA	0.312	NA	2.457165
1406	17	10309962	10309962	C	T	intronic	MYH8	NA	NA	NA	ncRNA_intronic	ENSG00000214970	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs2024076	0.54	0.54	0.534	0.531749	0.6819	0.1657	0.5187	0.7587	0.4571	0.69	0.16	0.54	0.77	0.5607	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.53359	NA	NA	0.633606	0.723182	NA	0.471	NA	2.4571273
1406	14	104027557	104027557	C	T	intronic	BAG5	NA	NA	NA	ncRNA_intronic	ENSG00000258851	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs11625397	0.58	0.58	0.586	0.522364	0.6412	0.4673	0.572	0.5756	0.3497	0.65	0.46	0.6	0.59	0.5817	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.353821	1.353821	NA	0.654102	0.586397	NA	0.601	NA	2.4563313
1406	13	114323997	114323997	T	C	intronic	GRK1	NA	NA	NA	intronic	ENSG00000185974	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs9796234	0.48	0.48	0.427	0.48123	0.5189	0.6349	0.4813	0.1989	0.6656	0.54	0.61	0.5	0.22	0.5289	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.506948	1.506948	NA	0.496459	0.24231	NA	0.268	NA	2.455741
1406	14	22392366	22392366	C	T	intergenic	OR4E2,DAD1	dist=258128;dist=641441	NA	NA	intronic	ENSG00000211792	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs12437316	0.48	0.48	0.491	0.465655	0.3956	0.504	0.513	0.5091	0.4059	0.41	0.55	0.46	0.51	0.4206	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.718697	NA	NA	0.39513	0.466468	NA	0.529	NA	2.4553367
1407	17	48477246	48477246	A	G	intergenic	LRRC59,ACSF2	dist=2332;dist=26273	NA	NA	intergenic	ENSG00000253102,ENSG00000167107	dist=1997;dist=26273	NA	NA	NA	NA	17q21.33	NA	NA	NA	NA	rs11079914	0.72	0.72	0.715	0.726637	0.8787	0.244	0.879	0.9259	0.6902	0.87	0.24	0.91	0.93	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.582429	NA	NA	NA	NA	NA	0.833	NA	2.4546334
1407	10	24878129	24878129	G	A	intronic	ARHGAP21	NA	NA	NA	intronic	ENSG00000107863	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs7478260	0.79	0.79	0.803	0.816094	0.7634	0.7649	0.7695	0.9478	0.7781	0.76	0.73	0.78	0.94	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.328636	NA	NA	0.781979	0.921243	NA	0.797	NA	2.454621
1407	11	95521648	95521648	A	G	intronic	FAM76B	NA	NA	NA	intronic	ENSG00000077458	NA	NA	NA	NA	NA	11q21	NA	NA	NA	NA	rs1727165	0.57	0.57	0.612	0.577276	0.5119	0.3433	0.4942	0.9274	0.4714	0.51	0.39	0.54	0.92	0.5215	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.445488	1.445488	NA	0.512027	0.841147	NA	0.601	NA	2.454573
1407	22	40803186	40803186	G	T	intronic	SGSM3	NA	NA	NA	intronic	ENSG00000100359	NA	NA	NA	NA	NA	22q13.1	NA	NA	NA	NA	rs2018393	0.58	0.58	0.6	0.622804	0.494	0.3006	0.6686	0.9637	0.5941	0.51	0.33	0.63	0.96	0.5557	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.76302	NA	NA	0.495814	0.894641	NA	0.681	NA	2.454486
1407	1	113234456	113234456	G	A	intronic	MOV10	NA	NA	NA	intronic	ENSG00000155363	NA	NA	NA	NA	NA	1p13.2	NA	NA	NA	NA	rs2932532	0.47	0.47	0.484	0.519569	0.5119	0.371	0.572	0.503	0.6656	0.49	0.34	0.58	0.51	0.5107	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.271034	NA	NA	0.523488	0.522015	NA	0.529	NA	2.453912
1407	22	50715973	50715973	G	T	intronic	PLXNB2	NA	NA	NA	intronic	ENSG00000196576	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs28637964	0.45	0.45	0.432	0.442093	0.5378	0.5387	0.3285	0.2632	0.5665	0.54	0.54	0.34	0.3	0.4877	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.023982	NA	NA	0.520743	0.283023	NA	0.362	NA	2.453757
1407	3	45776900	45776900	A	G	intronic	SACM1L	NA	NA	NA	intronic	ENSG00000211456	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs1468543	0.37	0.37	0.336	0.314497	0.5616	0.2123	0.428	0.171	0.2791	0.58	0.19	0.46	0.18	0.4525	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.414822	1.414822	NA	0.532209	0.209714	NA	0.362	NA	2.453691
1407	12	110221631	110221631	G	C	intronic	TRPV4	NA	NA	NA	intronic	ENSG00000111199	NA	NA	NA	NA	NA	12q24.11	NA	NA	NA	NA	rs10774894	0.57	0.57	0.575	0.561901	0.5129	0.7639	0.487	0.4418	0.6196	0.51	0.79	0.47	0.48	0.5389	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.907513	NA	NA	0.494535	0.440082	NA	0.391	NA	2.453665
1407	16	50327439	50327439	A	G	intronic	ADCY7	NA	NA	NA	intronic	ENSG00000121281	NA	NA	NA	NA	NA	16q12.1	NA	NA	NA	NA	rs2302712	0.41	0.41	0.376	0.388578	0.5278	0.2004	0.4524	0.4092	0.3661	0.52	0.19	0.46	0.45	0.4739	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.802599	NA	NA	0.544884	0.430391	NA	0.384	NA	2.453416
1407	6	33659536	33659536	A	G	intronic	ITPR3	NA	NA	NA	intronic	ENSG00000096433	NA	NA	NA	NA	NA	6p21.31	NA	NA	NA	NA	rs2296740	0.56	0.56	0.498	0.583067	0.498	0.8998	0.6167	0.2156	0.817	0.51	0.88	0.62	0.24	0.5755	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.693634	NA	NA	0.47314	0.311394	NA	0.536	NA	2.45336
1407	22	37319425	37319425	G	T	intronic	CSF2RB	NA	NA	NA	intronic	ENSG00000100368	NA	NA	NA	NA	NA	22q12.3	NA	NA	NA	NA	rs2072713	0.49	0.49	0.461	0.454273	0.5169	0.5526	0.6081	0.329	0.3487	0.53	0.57	0.55	0.31	0.5152	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.749803	NA	NA	0.515698	0.362625	NA	0.536	NA	2.452202
1407	1	14149601	14149601	C	T	intronic	PRDM2	NA	NA	NA	intronic	ENSG00000116731	NA	NA	NA	NA	NA	1p36.21	NA	NA	NA	NA	rs2697969	0.74	0.74	0.743	0.714257	0.7893	0.621	0.7723	0.7292	0.6718	0.8	0.64	0.79	0.75	NA	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.106657	NA	NA	0.758642	0.716763	NA	0.768	NA	2.452058
1407	12	124364131	124364131	G	C	intronic	DNAH10	NA	NA	NA	intronic	ENSG00000197653	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs1317312	0.48	0.48	0.468	0.473842	0.5378	0.2867	0.5231	0.5514	0.4611	0.54	0.29	0.54	0.53	0.4953	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.115706	NA	NA	0.515052	0.563351	NA	0.428	NA	2.451848
1407	7	156971581	156971581	T	C	intronic	UBE3C	NA	NA	NA	intronic	ENSG00000009335	NA	NA	NA	NA	NA	7q36.3	NA	NA	NA	NA	rs870745	0.62	0.62	0.616	0.627196	0.506	0.5109	0.5576	0.9554	0.4775	0.49	0.52	0.6	0.93	0.5427	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.457269	NA	NA	0.501163	0.893327	NA	0.638	NA	2.450137
1407	7	2400306	2400306	T	C	intronic	EIF3B	NA	NA	NA	intronic	ENSG00000106263	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs953770	0.53	0.53	0.499	0.467652	0.5129	0.7242	0.6023	0.2436	0.364	0.53	0.74	0.59	0.24	0.5193	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.330018	NA	NA	0.518605	0.305266	NA	0.399	NA	2.449195
1407	19	29567134	29567134	T	C	intergenic	LOC100505835,UQCRFS1	dist=62272;dist=131033	NA	NA	intergenic	ENSG00000267014,ENSG00000169021	dist=62272;dist=131039	NA	NA	NA	NA	19q12	NA	NA	NA	NA	rs1549944	0.48	0.48	0.48	0.493211	0.3797	0.5347	0.438	0.6505	0.3937	0.39	0.52	0.42	0.62	0.5047	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.08011	NA	NA	NA	NA	NA	0.522	NA	2.4489334
1407	19	36038390	36038390	A	G	UTR3	TMEM147	NM_032635:c.*41A>G,NM_001242597:c.*41A>G,NM_001242598:c.*41A>G	NA	NA	UTR3	ENSG00000105677	ENST00000222284:c.*41A>G,ENST00000593027:c.*297A>G,ENST00000392204:c.*41A>G	NA	NA	NA	NA	19q13.12	NA	NA	NA	NA	rs7599	0.65	0.65	0.618	0.646166	0.6193	0.7391	0.6844	0.5318	0.7055	0.62	0.77	0.68	0.53	0.6446	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.12643	NA	NA	0.620958	0.571266	NA	0.558	NA	2.4484754
1407	1	17720439	17720439	T	C	intronic	PADI6	NA	NA	NA	ncRNA_intronic	ENSG00000256049	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs6695849	0.58	0.58	0.54	0.570887	0.6133	0.5268	0.6254	0.4864	0.6483	0.63	0.55	0.64	0.49	0.6244	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.259227	NA	NA	0.647396	0.534729	NA	0.543	NA	2.4482373
1407	22	45794925	45794925	C	A	intronic	SMC1B	NA	NA	NA	intronic	ENSG00000077935	NA	NA	NA	NA	NA	22q13.31	NA	NA	NA	NA	rs79154	0.65	0.65	0.663	0.704473	0.505	0.7014	0.5317	0.9327	0.727	0.49	0.66	0.57	0.91	0.5677	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.957628	NA	NA	0.479105	0.862311	NA	0.797	NA	2.448195
1407	14	106478464	106478464	T	C	intergenic	ADAM6,LINC00226	dist=40106;dist=265805	NA	NA	intronic	ENSG00000211936	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs80132192	0.51	0.51	NA	0.591653	0.5984	0.7192	0.6052	0.3631	0.7526	0.53	0.65	0.52	0.32	0.6211	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.838155	NA	NA	NA	NA	NA	0.116	NA	2.4471667
1407	12	51890721	51890721	G	A	intronic	SLC4A8	NA	NA	NA	intronic	ENSG00000050438	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs10783448	0.44	0.44	0.424	0.435104	0.5368	0.3671	0.4251	0.351	0.5215	0.53	0.4	0.49	0.33	0.4944	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.12926	NA	NA	0.522018	0.39591	NA	0.565	NA	2.446782
1407	4	100045647	100045647	A	G	ncRNA_intronic	LOC100507053	NA	NA	NA	ncRNA_intronic	ENSG00000246090	NA	NA	NA	NA	NA	4q23	NA	NA	NA	NA	rs2602894	0.86	0.86	0.866	0.882987	0.7227	1	0.8271	0.9312	0.9018	0.73	1	0.81	0.93	0.786	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.169998	NA	NA	0.711274	0.89	NA	0.761	NA	2.4466926
1407	3	189712090	189712090	G	A	intronic	LEPREL1	NA	NA	NA	intronic	ENSG00000090530	NA	NA	NA	NA	NA	3q28	NA	NA	NA	NA	rs1719598	0.65	0.65	NA	0.760982	0.7694	0.9355	0.7781	0.6172	0.7546	0.65	0.82	0.67	0.45	0.7844	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.409514	NA	NA	NA	NA	NA	NA	NA	2.4462
1407	1	35563206	35563206	C	G	intronic	ZMYM1	NA	NA	NA	intronic	ENSG00000197056	NA	NA	NA	NA	NA	1p34.3	NA	NA	Name=49	NA	rs6658571	0.6	0.6	0.58	0.590056	0.8946	0.3522	0.6441	0.3623	0.7914	0.9	0.34	0.7	0.35	0.7709	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.416132	NA	NA	0.889065	0.453589	NA	0.688	NA	2.445435
1407	6	160229889	160229889	T	C	intronic	PNLDC1	NA	NA	NA	intronic	ENSG00000146453	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs35872675	0.35	0.35	0.302	0.356629	0.5119	0.1617	0.5807	0.1679	0.4939	0.52	0.15	0.55	0.17	0.4982	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.243994	NA	NA	0.544767	0.214026	NA	0.283	NA	2.445133
1408	14	24523594	24523594	G	A	intronic	LRRC16B	NA	NA	NA	intronic	ENSG00000186648	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs11158525	0.42	0.42	0.468	0.425519	0.5447	0.1161	0.5879	0.5182	0.3814	0.54	0.1	0.59	0.51	0.4858	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.248433	1.248433	NA	0.524767	0.520654	NA	0.42	NA	2.444733
1408	17	78188963	78188963	G	A	intronic	SGSH	NA	NA	NA	intronic	ENSG00000181523	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs4889839	0.57	0.57	0.575	0.556909	0.5169	0.6181	0.4193	0.6551	0.5	0.52	0.66	0.43	0.65	0.5356	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.535974	NA	NA	0.502908	0.641621	NA	0.558	NA	2.444592
1408	5	153372525	153372525	G	A	UTR3	FAM114A2	NM_018691:c.*11C>T	NA	NA	UTR3	ENSG00000055147	ENST00000351797:c.*11C>T,ENST00000522858:c.*11C>T,ENST00000520667:c.*11C>T,ENST00000520313:c.*11C>T	NA	NA	NA	NA	5q33.2	NA	NA	NA	NA	rs1057772	0.68	0.68	0.677	0.666933	0.6193	0.8571	0.6873	0.4977	0.7342	0.63	0.87	0.65	0.56	0.6553	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.011672	NA	NA	0.614186	0.54108	NA	0.616	NA	2.4445474
1408	8	29005128	29005128	A	G	intronic	KIF13B	NA	NA	NA	intronic	ENSG00000197892	NA	NA	NA	NA	NA	8p12	NA	NA	NA	NA	rs13263819	0.36	0.36	0.333	0.324481	0.5527	0.1448	0.3689	0.208	0.4008	0.55	0.16	0.39	0.27	0.4603	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.680887	2.680887	NA	0.54261	0.263158	NA	0.29	NA	2.44439
1408	19	21587918	21587918	G	T	intronic	ZNF493	NA	NA	NA	intronic	ENSG00000196268	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs7254059	0.59	0.59	0.58	0.576677	0.496	0.627	0.5461	0.6331	0.5532	0.49	0.67	0.57	0.67	0.5396	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.965714	NA	NA	0.520116	0.622106	NA	0.377	NA	2.444284
1408	4	100045574	100045574	T	C	ncRNA_UTR3	ADH4	NA	NA	NA	ncRNA_UTR3	ENSG00000198099	NA	NA	NA	NA	NA	4q23	NA	NA	NA	NA	rs1042364	0.86	0.86	0.866	0.882788	0.7227	1	0.8271	0.9312	0.9008	0.73	1	0.81	0.93	0.7887	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.448911	NA	NA	0.711145	0.89	NA	0.761	NA	2.4441216
1408	20	44639511	44639511	C	T	intronic	MMP9	NA	NA	NA	intronic	ENSG00000100985	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs3918253	0.28	0.28	0.28	0.260583	0.5427	0.001	0.3357	0.1936	0.2751	0.53	0.0017	0.36	0.16	0.4334	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.950838	NA	NA	0.579884	0.261235	NA	0.435	NA	2.444016
1408	7	1024581	1024581	T	C	intronic	CYP2W1	NA	NA	NA	intronic	ENSG00000073067	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs3824081	0.62	0.62	0.608	0.59984	0.497	0.6151	0.6066	0.761	0.4673	0.5	0.68	0.57	0.78	0.5559	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.112253	NA	NA	0.503264	0.713539	NA	0.623	NA	2.443836
1408	1	93711782	93711782	T	A	intronic	CCDC18	NA	NA	NA	intronic	ENSG00000122483	NA	NA	NA	NA	NA	1p22.1	NA	NA	NA	NA	rs3754186	0.45	0.45	0.401	0.442292	0.5408	0.6429	0.5274	0.0212	0.6431	0.54	0.66	0.51	0.04	0.5061	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.367145	NA	NA	0.510442	0.10245	NA	0.42	NA	2.442658
1408	3	167754573	167754573	A	G	intronic	GOLIM4	NA	NA	NA	intronic	ENSG00000173905	NA	NA	NA	NA	NA	3q26.2	NA	NA	NA	NA	rs6786410	0.46	0.46	0.509	0.453474	0.5477	0.0933	0.353	0.8064	0.3221	0.54	0.08	0.39	0.82	0.4713	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.847482	NA	NA	0.538488	0.756922	NA	0.536	NA	2.442512
1408	11	102207851	102207851	G	A	UTR3	BIRC3	NM_182962:c.*18G>A,NM_001165:c.*18G>A	NA	NA	UTR3	ENSG00000023445	ENST00000263464:c.*18G>A,ENST00000532808:c.*18G>A	NA	NA	NA	NA	11q22.2	NA	NA	NA	NA	rs1055088	0.65	0.65	0.645	0.65635	0.6093	0.7242	0.5937	0.6793	0.6483	0.62	0.68	0.61	0.68	0.6635	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.699547	NA	NA	0.618222	0.67257	NA	0.652	NA	2.4423114
1408	1	17720615	17720615	A	C	intronic	PADI6	NA	NA	NA	ncRNA_intronic	ENSG00000256049	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs10458537	0.58	0.58	0.544	0.572085	0.6143	0.5268	0.6282	0.4864	0.6513	0.63	0.55	0.64	0.49	0.626	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.823765	NA	NA	0.650824	0.53673	NA	0.543	NA	2.4422093
1408	1	68173264	68173264	C	T	intronic	GNG12	NA	NA	NA	intronic	ENSG00000172380	NA	NA	NA	NA	NA	1p31.3	NA	NA	NA	NA	rs2295942	0.41	0.41	0.381	0.413738	0.5129	0.4216	0.4885	0.1611	0.592	0.5	0.43	0.49	0.16	0.5066	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.447781	NA	NA	0.538372	0.235134	NA	0.478	NA	2.442128
1408	2	44152180	44152180	G	A	intronic	LRPPRC	NA	NA	NA	intronic	ENSG00000138095	NA	NA	NA	NA	NA	2p21	NA	NA	NA	NA	rs4952694	0.72	0.72	0.726	0.751997	0.4891	0.9663	0.6398	0.9017	0.6789	0.48	0.96	0.57	0.91	0.593	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.572817	NA	NA	0.47593	0.820699	NA	0.667	NA	2.44197
1408	16	84473137	84473137	G	C	intronic	ATP2C2	NA	NA	NA	intronic	ENSG00000064270	NA	NA	NA	NA	NA	16q24.1	NA	NA	Name=2	NA	rs247904	0.88	0.88	0.861	0.862819	0.8529	0.9573	0.8876	0.7784	0.8722	0.86	0.94	0.89	0.81	0.8496	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.40821	NA	NA	0.855537	0.817574	NA	0.862	NA	2.441963
1408	9	93629347	93629347	G	A	intronic	SYK	NA	NA	NA	intronic	ENSG00000165025	NA	NA	NA	NA	NA	9q22.2	NA	NA	NA	NA	rs1760124	0.88	0.88	0.888	0.89397	0.7744	0.9673	0.8689	0.9554	0.8763	0.77	0.98	0.86	0.95	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.83337	NA	NA	0.784098	0.924855	NA	0.833	NA	2.441502
1408	20	44640959	44640959	G	A	intronic	MMP9	NA	NA	NA	intronic	ENSG00000100985	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs3918256	0.28	0.28	0.309	0.260583	0.5437	0.001	0.3357	0.1929	0.2751	0.53	0.0017	0.36	0.16	0.4361	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.440164	NA	NA	0.579223	0.261235	NA	0.449	NA	2.440977
1408	4	8608979	8608979	G	A	intronic	CPZ	NA	NA	NA	intronic	ENSG00000109625,ENSG00000155269	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs2302578	0.47	0.47	0.462	0.466853	0.5417	0.4841	0.6326	0.2088	0.6033	0.54	0.52	0.6	0.23	0.5085	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.529664	NA	NA	0.508837	0.256468	NA	0.399	NA	2.440963
1408	18	7774104	7774104	T	C	intronic	PTPRM	NA	NA	NA	intronic	ENSG00000173482	NA	NA	NA	NA	NA	18p11.23	NA	NA	NA	NA	rs875530	0.53	0.53	0.507	0.532348	0.5	0.8472	0.5259	0.2194	0.6687	0.5	0.85	0.49	0.23	0.5461	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.57431	NA	NA	0.513256	0.291648	NA	0.5	NA	2.440644
1408	3	189590824	189590824	G	C	intronic	TP63	NA	NA	NA	intronic	ENSG00000073282	NA	NA	NA	NA	NA	3q28	NA	NA	NA	NA	rs9840359	0.48	0.48	0.525	0.48762	0.5557	0.3502	0.4323	0.6649	0.3589	0.53	0.35	0.46	0.57	0.4953	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.770223	NA	NA	0.50907	0.569224	NA	0.355	NA	2.43993
1408	1	113202417	113202417	G	A	intronic	CAPZA1	NA	NA	NA	intronic	ENSG00000116489	NA	NA	NA	NA	NA	1p13.2	NA	NA	NA	NA	rs2932536	0.47	0.47	0.467	0.521965	0.5129	0.372	0.572	0.5204	0.6524	0.49	0.34	0.58	0.52	0.5246	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.205919	NA	NA	0.523721	0.52837	NA	0.529	NA	2.438779
1408	8	141561393	141561393	G	C	intronic	AGO2	NA	NA	NA	intronic	ENSG00000123908	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs2292779	0.55	0.55	0.588	0.669728	0.494	0.6052	0.6138	0.916	0.6237	0.46	0.5	0.54	0.76	0.5841	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.04478	NA	NA	0.484859	0.821721	NA	0.659	NA	2.437041
1408	9	20778631	20778631	A	G	intronic	FOCAD	NA	NA	NA	intronic	ENSG00000188352	NA	NA	NA	NA	NA	9p21.3	NA	NA	Name=4	NA	rs7875153	0.83	0.83	0.816	0.822684	0.8559	0.755	0.9207	0.7806	0.8456	0.86	0.79	0.92	0.77	0.8503	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.497675	3.497675	NA	0.857874	0.781463	NA	0.775	NA	2.435926
1408	3	193081206	193081206	G	A	intronic	ATP13A5	NA	NA	NA	intronic	ENSG00000187527	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs2367605	0.54	0.54	0.551	0.522165	0.5288	0.3859	0.5274	0.6762	0.4438	0.54	0.41	0.56	0.69	0.5177	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.278769	NA	NA	0.517907	0.641171	NA	0.587	NA	2.435593
1408	8	92972780	92972780	G	A	intronic	RUNX1T1	NA	NA	NA	intronic	ENSG00000079102	NA	NA	NA	NA	NA	8q21.3	NA	NA	NA	NA	rs2977676	0.69	0.69	0.693	0.764377	0.4841	0.8879	0.6844	0.9062	0.7904	0.46	0.85	0.67	0.88	0.5903	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.297456	NA	NA	0.490581	0.832047	NA	0.638	NA	2.435019
1409	6	42934620	42934620	C	T	intronic	PEX6	NA	NA	NA	intronic	ENSG00000124587	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs3818554	0.48	0.48	0.505	0.49401	0.5447	0.1696	0.428	0.7625	0.4601	0.55	0.19	0.43	0.76	0.491	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.067741	NA	NA	0.529419	0.731276	NA	0.58	NA	2.434881
1409	6	42935998	42935998	G	A	intronic	PEX6	NA	NA	NA	intronic	ENSG00000124587	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs9471982	0.48	0.48	0.497	0.497604	0.5457	0.1696	0.428	0.7753	0.4601	0.55	0.19	0.43	0.77	0.4904	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.928015	NA	NA	0.530137	0.733864	NA	0.565	NA	2.433763
1409	1	17725358	17725358	C	G	intronic	PADI6	NA	NA	NA	ncRNA_intronic	ENSG00000256049	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs2244936	0.63	0.63	0.608	0.6248	0.6123	0.5377	0.6542	0.6755	0.638	0.63	0.56	0.67	0.68	0.6384	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.282521	NA	NA	0.649881	0.68288	NA	0.283	NA	2.4327523
1409	9	80022415	80022415	A	T	intronic	VPS13A	NA	NA	NA	intronic	ENSG00000197969	NA	NA	NA	NA	NA	9q21.2	NA	NA	NA	NA	rs2025846	0.57	0.57	0.553	0.584665	0.5209	0.6796	0.5447	0.5711	0.5992	0.52	0.65	0.57	0.55	0.5431	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.182004	NA	NA	0.503267	0.561332	NA	0.587	NA	2.432733
1409	19	21588692	21588692	T	C	intronic	ZNF493	NA	NA	NA	intronic	ENSG00000196268,ENSG00000269237	NA	NA	NA	NA	NA	19p12	NA	NA	NA	NA	rs1055753	0.59	0.59	0.567	0.589457	0.503	0.6359	0.5519	0.6589	0.5634	0.49	0.67	0.57	0.67	0.5447	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.397632	NA	NA	0.52	0.623014	NA	0.428	NA	2.4323
1409	6	42932715	42932715	C	T	intronic	PEX6	NA	NA	NA	intronic	ENSG00000124587	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs2274517	0.49	0.49	0.52	0.502796	0.5447	0.1696	0.4308	0.7958	0.4581	0.55	0.19	0.43	0.79	0.4935	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.867178	NA	NA	0.529651	0.751021	NA	0.594	NA	2.432149
1409	7	23737795	23737795	T	C	intronic	FAM221A	NA	NA	NA	intronic	ENSG00000188732	NA	NA	NA	NA	NA	7p15.3	NA	NA	NA	NA	rs5029444	0.47	0.47	0.456	0.489816	0.5229	0.6181	0.5	0.2322	0.6646	0.51	0.59	0.49	0.26	0.5295	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.295359	NA	NA	0.515934	0.278711	NA	0.5	NA	2.431666
1409	14	73730290	73730290	C	A	intronic	PAPLN	NA	NA	NA	intronic	ENSG00000100767	NA	NA	NA	NA	NA	14q24.2	NA	NA	NA	NA	rs177385	0.63	0.63	0.644	0.665335	0.8141	0.376	0.6182	0.6467	0.8691	0.83	0.39	0.63	0.62	0.7553	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.444302	NA	NA	NA	NA	NA	0.674	NA	2.4306
1409	14	92280037	92280037	T	C	intronic	TC2N	NA	NA	NA	intronic	ENSG00000165929	NA	NA	NA	NA	NA	14q32.12	NA	NA	NA	NA	rs10134181	0.46	0.46	0.434	0.397564	0.5239	0.4772	0.562	0.1732	0.3722	0.53	0.51	0.56	0.21	0.5013	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.205676	NA	NA	0.544556	0.224342	NA	0.391	NA	2.430244
1409	6	13365913	13365913	C	G	intronic	GFOD1	NA	NA	NA	intronic	ENSG00000145990	NA	NA	NA	NA	NA	6p24.1	NA	NA	NA	NA	rs9367440	0.48	0.48	0.435	0.439297	0.5249	0.6677	0.5965	0.056	0.5225	0.54	0.7	0.55	0.08	0.5385	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.659491	NA	NA	0.506527	0.128394	NA	0.29	NA	2.430073
1409	6	42658752	42658752	T	C	intronic	UBR2	NA	NA	NA	intronic	ENSG00000024048	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs373341	0.47	0.47	0.483	0.469649	0.5517	0.3929	0.3991	0.4508	0.5399	0.56	0.41	0.4	0.48	0.497	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.470127	3.470127	NA	0.521512	0.472764	NA	0.471	NA	2.429788
1409	3	45748429	45748429	G	A	intronic	SACM1L	NA	NA	NA	intronic	ENSG00000211456	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs2742441	0.43	0.43	0.424	0.404952	0.5636	0.2639	0.4539	0.4297	0.319	0.58	0.22	0.48	0.4	0.4718	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.447577	NA	NA	0.535	0.42079	NA	0.42	NA	2.4296
1409	6	166743760	166743760	G	C	intronic	SFT2D1	NA	NA	NA	intronic	ENSG00000198818	NA	NA	NA	NA	NA	6q27	NA	NA	NA	NA	rs9348119	0.48	0.48	0.466	0.478035	0.502	0.6161	0.5303	0.2284	0.6115	0.51	0.6	0.55	0.25	0.5582	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.674314	1.674314	NA	0.511977	0.276441	NA	0.333	NA	2.427823
1409	17	76482256	76482256	A	G	ncRNA_intronic	LOC100996295	NA	NA	NA	ncRNA_intronic	ENSG00000267432	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs691142	0.78	0.78	0.761	0.800919	0.7386	0.7153	0.8473	0.8812	0.8119	0.72	0.69	0.85	0.9	0.7661	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.735915	NA	NA	0.735008	0.86072	NA	0.775	NA	2.4269586
1409	16	18858727	18858727	A	C	intronic	SMG1	NA	NA	NA	intronic	ENSG00000157106	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs2650615	0.41	0.41	0.372	0.425319	0.5209	0.2242	0.536	0.407	0.4806	0.52	0.19	0.55	0.38	0.4929	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.611366	NA	NA	0.559419	0.434417	NA	0.442	NA	2.426781
1409	22	22891081	22891081	G	T	intronic	PRAME	NA	NA	NA	intronic	ENSG00000185686	NA	NA	NA	NA	NA	22q11.22	NA	NA	NA	NA	rs2072049	0.46	0.46	0.436	0.475639	0.5398	0.4603	0.4063	0.3585	0.6329	0.55	0.43	0.45	0.38	0.5184	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.443141	NA	NA	0.515501	0.373806	NA	0.391	NA	2.426299
1409	15	62327127	62327127	T	C	intronic	VPS13C	NA	NA	NA	intronic	ENSG00000129003	NA	NA	NA	NA	NA	15q22.2	NA	NA	NA	NA	rs2414758	0.55	0.55	0.478	0.507788	0.5229	0.4732	0.6614	0.4796	0.4571	0.56	0.51	0.64	0.51	0.5348	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.092739	NA	NA	0.516403	0.50227	NA	0.428	NA	2.425897
1410	3	12857823	12857823	C	T	intronic	CAND2	NA	NA	NA	intronic	ENSG00000144712	NA	NA	NA	NA	NA	3p25.2	NA	NA	NA	NA	rs731646	0.43	0.43	0.459	0.384984	0.5815	0.3224	0.4049	0.3714	0.2515	0.57	0.29	0.38	0.4	0.47	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.053936	NA	NA	0.525253	0.391082	NA	0.449	NA	2.423247
1410	3	9952788	9952788	T	C	intronic	IL17RE	NA	NA	NA	intronic	ENSG00000163701	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs279571	0.44	0.44	0.45	0.44389	0.5487	0.0962	0.4827	0.6528	0.3845	0.55	0.07	0.49	0.67	0.4945	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.112517	NA	NA	0.536163	0.633454	NA	0.355	NA	2.420637
1410	5	7690754	7690754	C	T	intronic	ADCY2	NA	NA	NA	intronic	ENSG00000078295	NA	NA	NA	NA	NA	5p15.31	NA	NA	NA	NA	rs2914289	0.39	0.39	0.334	0.365216	0.5517	0.1627	0.5836	0.2897	0.3292	0.54	0.18	0.54	0.28	0.4865	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.014269	NA	NA	0.541163	0.312074	NA	0.391	NA	2.420637
1410	15	40589830	40589830	G	A	intronic	PLCB2	NA	NA	NA	intronic	ENSG00000137841	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs2305649	0.69	0.69	0.68	0.69369	0.4821	0.7857	0.6801	0.8336	0.637	0.5	0.84	0.63	0.84	0.5957	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.083453	NA	NA	0.501679	0.784596	NA	0.696	NA	2.420521
1410	21	35247873	35247873	C	G	intronic	ITSN1	NA	NA	NA	intronic	ENSG00000205726,ENSG00000249209	NA	NA	NA	NA	NA	21q22.11	NA	NA	NA	NA	rs933130	0.57	0.57	0.583	0.581869	0.5139	0.6181	0.3905	0.7723	0.4928	0.52	0.6	0.38	0.76	0.5412	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.654071	NA	NA	0.524663	0.712892	NA	0.587	NA	2.420237
1410	2	44116836	44116836	C	T	intronic	LRPPRC	NA	NA	NA	intronic	ENSG00000138095	NA	NA	NA	NA	NA	2p21	NA	NA	NA	NA	rs2955280	0.72	0.72	0.739	0.74381	0.5	0.9563	0.6398	0.8971	0.6421	0.49	0.95	0.56	0.91	0.5962	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.003629	2.003629	NA	0.484302	0.82138	NA	0.659	NA	2.419498
1410	21	22841123	22841123	G	A	intronic	NCAM2	NA	NA	NA	intronic	ENSG00000154654	NA	NA	NA	NA	NA	21q21.1	NA	NA	NA	NA	rs2250508	0.41	0.41	0.4	0.413139	0.5417	0.0565	0.415	0.6135	0.3763	0.55	0.05	0.44	0.61	0.48	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.435999	NA	NA	0.55974	0.60435	NA	0.536	NA	2.41856
1410	22	31335724	31335724	T	A	intronic	MORC2	NA	NA	NA	intronic	ENSG00000133422	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs1005252	0.59	0.59	0.584	0.605431	0.5169	0.7659	0.4986	0.6331	0.5695	0.5	0.7	0.56	0.63	0.5421	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.176739	NA	NA	0.522907	0.607354	NA	0.572	NA	2.418093
1410	1	15844926	15844926	C	T	intronic	CASP9	NA	NA	NA	intronic	ENSG00000132906	NA	NA	NA	NA	NA	1p36.21	NA	NA	NA	NA	rs1820205	0.6	0.6	0.619	0.584665	0.5149	0.6538	0.4986	0.739	0.4376	0.54	0.63	0.5	0.74	0.5398	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.165114	NA	NA	0.527681	0.703586	NA	0.449	NA	2.417619
1410	17	73997474	73997474	G	A	ncRNA_exonic	TEN1-CDK3	NA	NA	NA	ncRNA_exonic	ENSG00000261408	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs2069528	0.82	0.82	0.841	0.842053	0.7237	0.8829	0.7622	0.9584	0.8211	0.73	0.88	0.74	0.95	0.7845	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.102854	NA	0.26	0.741103	0.924421	NA	0.855	NA	2.4173636
1410	6	147631201	147631201	A	G	intronic	STXBP5	NA	NA	NA	intronic	ENSG00000164506	NA	NA	NA	NA	NA	6q24.3	NA	NA	NA	NA	rs6928919	0.44	0.44	0.427	0.455471	0.5229	0.2956	0.5389	0.4175	0.5429	0.53	0.3	0.5	0.42	0.5152	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.790247	NA	NA	0.545115	0.431216	NA	0.406	NA	2.416785
1410	1	235715556	235715556	C	G	intronic	GNG4	NA	NA	NA	intronic	ENSG00000168243	NA	NA	NA	NA	NA	1q42.3	NA	NA	NA	NA	rs423026	0.61	0.61	0.583	0.623403	0.495	0.8383	0.6556	0.562	0.5941	0.51	0.81	0.59	0.55	0.58	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.238864	NA	NA	0.508721	0.575125	NA	0.71	NA	2.416279
1410	12	56082785	56082785	C	G	intronic	ITGA7	NA	NA	NA	intronic	ENSG00000135424	NA	NA	NA	NA	NA	12q13.2	NA	NA	NA	NA	rs3782240	0.58	0.58	0.515	0.590455	0.494	0.9296	0.6268	0.2716	0.7454	0.51	0.92	0.58	0.3	0.5854	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.139178	NA	NA	0.504419	0.300545	NA	0.522	NA	2.416181
1410	4	68919617	68919617	G	A	ncRNA_UTR3	TMPRSS11F	NA	NA	NA	ncRNA_UTR3	ENSG00000198092	NA	NA	NA	NA	NA	4q13.2	NA	NA	NA	NA	rs10018943	0.67	0.67	0.669	0.657947	0.7296	0.8651	0.5476	0.4334	0.7526	0.74	0.87	0.6	0.39	0.7292	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.00942	NA	NA	0.79186	0.532683	NA	0.71	NA	2.4160066
1410	6	36075219	36075219	A	C	intronic	MAPK14	NA	NA	NA	intronic	ENSG00000112062	NA	NA	NA	NA	NA	6p21.31	NA	NA	NA	NA	rs9470219	0.37	0.37	0.374	0.397364	0.5616	0.2579	0.4179	0.1846	0.6452	0.54	0.26	0.44	0.18	0.4838	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.120317	NA	NA	0.538605	0.255107	ID=COSN167754;OCCURENCE=1(large_intestine)	0.326	NA	2.415995
1410	20	40743829	40743829	A	G	intronic	PTPRT	NA	NA	NA	intronic	ENSG00000196090	NA	NA	NA	NA	NA	20q12	NA	NA	NA	NA	rs2076248	0.57	0.57	0.544	0.55651	0.5278	0.5258	0.5634	0.6241	0.5215	0.51	0.57	0.57	0.66	0.5308	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.915984	NA	NA	0.525409	0.646475	NA	0.522	NA	2.415991
1410	19	45493635	45493635	C	G	intronic	CLPTM1	NA	NA	NA	intronic	ENSG00000104853	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs875255	0.43	0.43	0.435	0.423922	0.5447	0.371	0.3098	0.4221	0.4376	0.53	0.35	0.36	0.4	0.4917	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.937327	NA	NA	0.547791	0.443713	NA	0.435	NA	2.415809
1410	2	169814655	169814655	G	T	intronic	ABCB11	NA	NA	NA	intronic	ENSG00000073734	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	rs853772	0.48	0.48	0.442	0.497604	0.5109	0.6597	0.5115	0.2307	0.6677	0.5	0.64	0.51	0.22	0.5399	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.555321	NA	NA	0.533479	0.269537	NA	0.312	NA	2.415721
1410	2	241440020	241440020	T	C	intronic	ANKMY1	NA	NA	NA	intronic	ENSG00000144504	NA	NA	NA	NA	NA	2q37.3	NA	NA	NA	NA	rs12986801	0.56	0.56	0.534	0.554912	0.5268	0.7808	0.5115	0.3238	0.6943	0.56	0.79	0.51	0.33	0.5586	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.221397	NA	NA	0.49907	0.364049	NA	0.609	NA	2.41553
1410	11	49000522	49000522	C	T	intergenic	OR4A47,TRIM49B	dist=489248;dist=52630	NA	NA	ncRNA_exonic	ENSG00000220948	NA	NA	NA	NA	NA	11p11.12	NA	NA	NA	NA	rs1963629	0.77	0.77	0.77	0.708466	0.8201	0.5972	0.7622	0.8101	0.5327	0.82	0.65	0.8	0.81	0.7644	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.024394	NA	0.26	NA	NA	NA	0.674	NA	2.4155
1411	11	49000423	49000423	C	G	intergenic	OR4A47,TRIM49B	dist=489149;dist=52729	NA	NA	ncRNA_splicing	ENSG00000220948	ENST00000534741:exon4:c.738+1G>C	NA	NA	NA	NA	11p11.12	NA	NA	NA	NA	rs1965370	0.8	0.8	0.768	0.708466	0.8201	0.5972	0.7622	0.8101	0.5327	0.85	0.69	0.81	0.82	0.765	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.52199	NA	NA	NA	NA	NA	0.768	NA	2.4149
1411	2	241555784	241555784	G	T	intronic	GPR35	NA	NA	NA	intronic	ENSG00000142330,ENSG00000178623	NA	NA	NA	NA	NA	2q37.3	NA	NA	NA	NA	rs12052926	0.52	0.52	0.487	0.495208	0.5179	0.6587	0.5144	0.3003	0.5532	0.51	0.65	0.57	0.33	0.5295	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.617967	NA	NA	0.538023	0.308216	NA	0.442	NA	2.414577
1411	12	51846090	51846090	G	A	intronic	SLC4A8	NA	NA	NA	intronic	ENSG00000050438	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs1995691	0.5	0.5	0.502	0.518171	0.5348	0.4534	0.4308	0.5605	0.5726	0.53	0.46	0.49	0.5	0.5238	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.768836	NA	NA	0.527558	0.573536	NA	0.594	NA	2.413842
1411	4	47905158	47905158	A	G	intronic	NFXL1	NA	NA	NA	intronic	ENSG00000170448	NA	NA	NA	NA	NA	4p12	NA	NA	NA	NA	rs2119204	0.86	0.86	0.851	0.851438	0.7913	0.9831	0.866	0.823	0.8057	0.81	0.99	0.85	0.83	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.996952	NA	NA	0.796082	0.83847	NA	0.884	NA	2.412618
1411	12	51851126	51851126	G	A	intronic	SLC4A8	NA	NA	NA	intronic	ENSG00000050438	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs4512904	0.5	0.5	0.501	0.518171	0.5348	0.4534	0.4308	0.5605	0.5726	0.53	0.46	0.49	0.5	0.5259	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.338025	2.338025	NA	0.527674	0.573309	NA	0.594	NA	2.411626
1411	11	49053601	49053601	A	G	intronic	TRIM49B	NA	NA	NA	intronic	ENSG00000182053	NA	NA	NA	NA	NA	11p11.12	NA	NA	NA	NA	rs2696923	0.77	0.77	0.76	0.714657	0.8231	0.6022	0.7565	0.8502	0.5061	0.82	0.63	0.78	0.85	0.766	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.947817	NA	NA	NA	NA	NA	0.196	NA	2.4109
1411	5	59899413	59899413	G	A	intronic	DEPDC1B	NA	NA	NA	intronic	ENSG00000035499	NA	NA	NA	NA	NA	5q12.1	NA	NA	NA	NA	rs11740327	0.48	0.48	0.458	0.411941	0.5378	0.5417	0.5764	0.2322	0.2751	0.54	0.57	0.56	0.24	0.5018	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.804263	NA	NA	0.549535	0.266576	ID=COSN167479;OCCURENCE=1(large_intestine)	0.464	NA	2.410865
1411	3	150883600	150883600	C	T	intronic	MED12L	NA	NA	NA	intronic	ENSG00000144893	NA	NA	NA	NA	NA	3q25.1	NA	NA	NA	NA	rs2567322	0.34	0.34	0.283	0.330072	0.5388	0.2212	0.4582	0.0545	0.5092	0.55	0.21	0.48	0.09	0.4918	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.000825	NA	NA	0.558605	0.135043	NA	0.442	NA	2.410795
1411	20	31644520	31644520	T	C	intronic	BPIFB3	NA	NA	NA	intronic	ENSG00000186190	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs408538	0.65	0.65	0.654	0.65655	0.5209	0.7798	0.5591	0.7799	0.5716	0.53	0.77	0.54	0.8	0.5488	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.096069	NA	NA	0.520116	0.71902	NA	0.638	NA	2.410184
1411	19	59010593	59010593	A	G	intronic	SLC27A5	NA	NA	NA	UTR5	ENSG00000083807	ENST00000595851:c.-331T>C,ENST00000594786:c.-331T>C	NA	NA	NA	NA	19q13.43	NA	Name=Max,TAF1,E2F6_(H-50),E2F6,USF1_(SC-8983),Pol2,HEY1,ZEB1_(SC-25388),c-Myc,Pol2-4H8,Sin3Ak-20,Egr-1	NA	NA	rs4801274	0.88	0.88	0.88	0.852436	0.9225	0.8929	0.8199	0.764	0.8814	0.92	0.91	0.87	0.79	0.8982	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.341158	1.341158	NA	0.935814	0.812301	NA	0.812	NA	2.4101527
1411	15	41816190	41816190	T	G	intronic	RPAP1	NA	NA	NA	intronic	ENSG00000103932	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs2297378	0.53	0.53	0.549	0.544129	0.5348	0.3621	0.585	0.677	0.5327	0.54	0.36	0.57	0.68	0.5397	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.269583	NA	NA	0.515698	0.647526	ID=COSN164916;OCCURENCE=1(breast)	0.507	NA	2.409802
1411	1	65858088	65858088	T	C	intronic	DNAJC6	NA	NA	NA	intronic	ENSG00000116675	NA	NA	NA	NA	NA	1p31.3	NA	NA	NA	NA	rs6588144	0.4	0.4	0.389	0.415935	0.5497	0.2054	0.4568	0.3767	0.5194	0.54	0.19	0.48	0.37	0.486	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.472531	NA	NA	0.554651	0.405583	NA	0.428	NA	2.409649
1411	4	124323738	124323738	T	C	UTR3	SPRY1	NM_001258038:c.*32T>C,NM_199327:c.*32T>C,NM_001258039:c.*32T>C,NM_005841:c.*32T>C	NA	NA	UTR3	ENSG00000164056	ENST00000339241:c.*32T>C,ENST00000394339:c.*32T>C	NA	NA	NA	NA	4q28.1	NA	NA	NA	NA	rs300574	0.46	0.46	0.425	0.41873	0.668	0.4147	0.4784	0.2179	0.3957	0.68	0.39	0.5	0.19	0.5786	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.763082	NA	NA	0.677775	0.319914	NA	0.391	NA	2.4089584
1411	15	41817367	41817367	A	G	intronic	RPAP1	NA	NA	NA	intronic	ENSG00000103932	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs2274858	0.53	0.53	0.536	0.540735	0.5308	0.3601	0.5836	0.6906	0.5041	0.54	0.35	0.57	0.7	0.5449	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.846066	NA	NA	0.515465	0.662733	NA	0.493	NA	2.408835
1411	11	2356603	2356603	T	C	intergenic	TSPAN32,CD81	dist=17173;dist=41944	NA	NA	ncRNA_exonic	ENSG00000236264	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs2651795	0.63	0.63	0.67	0.687101	0.8211	0.4554	0.768	0.6437	0.7894	0.78	0.38	0.75	0.59	0.7704	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.845306	NA	NA	NA	NA	NA	0.783	NA	2.4085
1411	10	26356037	26356037	C	T	intronic	MYO3A	NA	NA	NA	intronic	ENSG00000095777	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs3824696	0.4	0.4	0.375	0.397165	0.5616	0.2956	0.353	0.3124	0.4785	0.57	0.29	0.34	0.3	0.4847	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.017862	NA	NA	0.545476	0.361552	NA	0.435	NA	2.408224
1411	22	31521850	31521850	A	C	intronic	INPP5J	NA	NA	NA	exonic	ENSG00000185133	NA	synonymous SNV	ENSG00000185133:ENST00000331075:exon2:c.A1125C:p.T375T,ENSG00000185133:ENST00000400294:exon3:c.A24C:p.T8T,ENSG00000185133:ENST00000412277:exon3:c.A924C:p.T308T,ENSG00000185133:ENST00000405300:exon4:c.A24C:p.T8T	NA	NA	22q12.2	NA	NA	NA	NA	rs2240431	0.73	0.73	0.692	0.752596	0.828	0.5992	0.8631	0.621	0.9325	0.83	0.63	0.83	0.64	0.7993	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.197611	NA	NA	0.798324	0.666497	ID=COSM444884;OCCURENCE=1(breast)	0.761	NA	2.4077093
1412	12	123001737	123001737	G	A	intronic	RSRC2	NA	NA	NA	intronic	ENSG00000111011	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs57311174	0.43	0.43	0.423	0.426518	0.5427	0.4355	0.4496	0.2436	0.5286	0.56	0.4	0.41	0.26	0.5108	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.417307	NA	NA	0.541977	0.311394	ID=COSN164393;OCCURENCE=1(breast)	0.449	NA	2.404523
1412	1	235647631	235647631	G	T	intronic	B3GALNT2	NA	NA	NA	intronic	ENSG00000162885	NA	NA	NA	NA	NA	1q42.3	NA	NA	NA	NA	rs291387	0.65	0.65	0.635	0.678315	0.5129	0.8403	0.7104	0.5893	0.7791	0.52	0.85	0.71	0.6	0.5847	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.442124	NA	NA	0.498488	0.564685	NA	0.667	NA	2.403912
1412	10	26359180	26359180	T	G	intronic	MYO3A	NA	NA	NA	intronic	ENSG00000095777	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs3758441	0.4	0.4	0.402	0.396565	0.5616	0.2956	0.3516	0.3124	0.4765	0.57	0.29	0.34	0.3	0.4852	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.375222	NA	NA	0.549337	0.367847	NA	0.457	NA	2.403863
1412	10	26355862	26355862	G	T	intronic	MYO3A	NA	NA	NA	intronic	ENSG00000095777	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs3824702	0.4	0.4	0.4	0.396565	0.5616	0.2956	0.3516	0.3124	0.4765	0.57	0.29	0.34	0.3	0.4856	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.803517	NA	NA	0.549767	0.367907	NA	0.457	NA	2.403033
1412	10	26355872	26355872	A	G	intronic	MYO3A	NA	NA	NA	intronic	ENSG00000095777	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs3824701	0.4	0.4	0.4	0.396565	0.5616	0.2956	0.3516	0.3124	0.4765	0.57	0.29	0.34	0.3	0.4855	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.563672	NA	NA	0.55	0.36768	NA	0.457	NA	2.4029
1412	5	149000039	149000039	C	T	intronic	ARHGEF37	NA	NA	NA	intronic	ENSG00000183111	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs7733761	0.6	0.6	0.596	0.629393	0.4911	0.8323	0.6369	0.5098	0.7188	0.5	0.85	0.6	0.46	0.5908	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.006828	NA	NA	0.515336	0.535542	NA	0.457	NA	2.402764
1412	19	10883126	10883126	C	G	intronic	DNM2	NA	NA	NA	intronic	ENSG00000079805	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs3826803	0.51	0.51	0.49	0.557109	0.503	0.4613	0.6369	0.6135	0.5787	0.48	0.4	0.62	0.58	0.5528	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.605553	NA	NA	0.541512	0.614843	NA	0.543	NA	2.402688
1412	3	58355273	58355273	G	C	intronic	PXK	NA	NA	NA	intronic	ENSG00000168297	NA	NA	NA	NA	NA	3p14.3	NA	NA	NA	NA	rs9867320	0.78	0.78	0.785	0.772165	0.8082	0.8075	0.732	0.7156	0.8037	0.78	0.81	0.77	0.75	NA	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.102236	NA	NA	0.790252	0.71315	NA	0.79	NA	2.401548
1412	12	20893354	20893354	G	C	intronic	SLCO1C1	NA	NA	NA	intronic	ENSG00000139155	NA	NA	NA	NA	NA	12p12.2	NA	NA	NA	NA	rs12368368	0.45	0.45	0.398	0.442093	0.5089	0.5873	0.5793	0.0552	0.6493	0.52	0.62	0.55	0.08	0.5374	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.284952	NA	NA	0.552404	0.154861	NA	0.457	NA	2.401296
1412	15	40500986	40500986	C	T	intronic	BUB1B	NA	NA	NA	intronic	ENSG00000156970	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs11630664	0.4	0.4	0.414	0.396965	0.5606	0.2827	0.4683	0.2481	0.4969	0.55	0.29	0.46	0.26	0.4916	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.025277	NA	NA	0.546628	0.310713	NA	0.464	NA	2.401172
1412	12	20893108	20893108	C	T	intronic	SLCO1C1	NA	NA	NA	intronic	ENSG00000139155	NA	NA	NA	NA	NA	12p12.2	NA	NA	NA	NA	rs2271656	0.45	0.45	0.395	0.442292	0.5089	0.5873	0.5836	0.0537	0.6493	0.52	0.62	0.55	0.08	0.5374	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.341897	NA	NA	0.552907	0.148434	NA	0.471	NA	2.400793
1412	9	116997994	116997994	T	C	intronic	COL27A1	NA	NA	NA	intronic	ENSG00000196739	NA	NA	NA	NA	NA	9q32	NA	NA	NA	NA	rs2015408	0.75	0.75	0.728	0.800919	0.7903	0.4861	0.781	0.9856	0.9008	0.78	0.47	0.8	0.98	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.064938	2.064938	NA	0.809868	0.949422	NA	0.775	NA	2.399832
1412	10	97137105	97137105	A	G	intronic	SORBS1	NA	NA	NA	intronic	ENSG00000095637	NA	NA	NA	NA	NA	10q24.1	NA	NA	NA	NA	rs1536556	0.44	0.44	0.436	0.458866	0.5358	0.244	0.6354	0.4236	0.5235	0.52	0.25	0.62	0.41	0.53	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.093402	NA	NA	0.534656	0.434361	NA	0.413	NA	2.399544
1412	5	179998454	179998454	C	T	intronic	CNOT6	NA	NA	NA	intronic	ENSG00000113300	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs13164597	0.38	0.38	0.365	0.364816	0.5487	0.2143	0.3833	0.2897	0.4192	0.54	0.2	0.43	0.32	0.4818	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.70939	NA	NA	0.570581	0.323196	NA	0.428	NA	2.398919
1412	6	44081987	44081987	T	C	intronic	MRPL14	NA	NA	NA	intronic	ENSG00000180992	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs4711767	0.69	0.69	0.675	0.689896	0.499	0.8194	0.7205	0.8495	0.5153	0.49	0.81	0.68	0.85	0.5944	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.520881	NA	NA	0.508049	0.796591	NA	0.609	NA	2.398551
1412	6	35425416	35425416	A	G	intronic	FANCE	NA	NA	NA	intronic	ENSG00000112039	NA	NA	NA	NA	NA	6p21.31	NA	NA	NA	NA	rs13214239	0.41	0.41	0.368	0.359625	0.5606	0.3393	0.5634	0.053	0.4438	0.58	0.38	0.6	0.07	0.4966	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.332555	NA	NA	0.544767	0.152973	NA	0.326	NA	2.398033
1412	1	22183739	22183739	A	G	intronic	HSPG2	NA	NA	NA	intronic	ENSG00000142798	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs2305562	0.49	0.49	0.499	0.446885	0.5447	0.4653	0.4553	0.3964	0.3896	0.55	0.51	0.45	0.39	0.5031	0.55	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.324826	1.324826	NA	0.554884	0.417839	NA	0.384	NA	2.397316
1412	8	1791638	1791638	T	G	intronic	ARHGEF10	NA	NA	NA	intronic	ENSG00000104728	NA	NA	NA	NA	NA	8p23.3	NA	NA	NA	NA	rs11136432	0.43	0.43	0.39	0.392772	0.5527	0.4187	0.4092	0.1974	0.454	0.56	0.46	0.46	0.19	0.489	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.142063	NA	NA	0.56186	0.243526	NA	0.239	NA	2.39644
1412	7	148312382	148312382	T	G	intronic	C7orf33	NA	NA	NA	intronic	ENSG00000170279	NA	NA	NA	NA	NA	7q36.1	NA	NA	NA	NA	rs6962115	0.59	0.59	0.576	0.609625	0.5199	0.5813	0.5965	0.6611	0.6708	0.54	0.59	0.59	0.65	0.5665	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.111282	NA	NA	0.517558	0.652292	NA	0.551	NA	2.396042
1413	8	23702587	23702587	C	T	intronic	STC1	NA	NA	NA	intronic	ENSG00000159167	NA	NA	NA	NA	NA	8p21.2	NA	NA	NA	NA	rs1992053	0.59	0.59	0.597	0.623003	0.5169	0.5437	0.6614	0.6309	0.7761	0.53	0.57	0.69	0.65	0.5736	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.25211	NA	NA	0.514535	0.625284	NA	0.572	NA	2.394965
1413	12	105433607	105433607	G	A	intronic	ALDH1L2	NA	NA	NA	intronic	ENSG00000136010	NA	NA	NA	NA	NA	12q23.3	NA	NA	NA	NA	rs4964318	0.63	0.63	0.639	0.656749	0.5189	0.7619	0.4899	0.7519	0.68	0.5	0.8	0.47	0.77	0.5709	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.883891	NA	NA	0.516047	0.720608	NA	0.659	NA	2.394153
1413	11	10518521	10518521	C	T	intronic	AMPD3	NA	NA	NA	intronic	ENSG00000133805	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs2071016	0.5	0.5	0.503	0.479233	0.5308	0.6935	0.3646	0.3018	0.5266	0.58	0.65	0.38	0.3	0.5232	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.115663	NA	NA	0.552864	0.34507	NA	0.391	NA	2.393136
1413	19	56918560	56918560	T	A	intronic	ZNF583	NA	NA	NA	intronic	ENSG00000198440	NA	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs4801159	0.88	0.88	0.875	0.887181	0.8032	0.9494	0.8689	0.9448	0.8446	0.8	0.94	0.85	0.95	NA	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.455672	NA	NA	0.803897	0.916185	NA	0.884	NA	2.392903
1413	12	48238837	48238837	C	A	intronic	VDR	NA	NA	NA	intronic	ENSG00000111424	NA	NA	NA	NA	NA	12q13.11	NA	NA	NA	NA	rs7975232	0.5	0.5	0.521	0.515375	0.5547	0.2907	0.4409	0.6407	0.59	0.55	0.29	0.47	0.67	0.5187	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.450359	NA	NA	0.533961	0.61734	NA	0.529	NA	2.392639
1413	21	34128717	34128717	G	A	intronic	PAXBP1	NA	NA	NA	intronic	ENSG00000159086	NA	NA	NA	NA	NA	21q22.11	NA	NA	NA	NA	rs7279405	0.6	0.6	0.624	0.642572	0.5408	0.4792	0.4625	0.9607	0.6135	0.53	0.47	0.47	0.94	0.5474	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.680211	2.680211	NA	0.519884	0.879936	NA	0.645	NA	2.391916
1413	1	92852504	92852504	A	G	intronic	RPAP2	NA	NA	NA	intronic	ENSG00000122484	NA	NA	NA	NA	NA	1p22.1	NA	NA	NA	NA	rs10747411	0.9	0.9	0.91	0.93151	0.8062	0.998	0.8876	0.9766	0.9622	0.81	1	0.86	0.97	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.96533	NA	NA	0.802326	0.955202	NA	0.877	NA	2.391474
1413	4	177093505	177093505	T	G	intronic	WDR17	NA	NA	NA	intronic	ENSG00000150627	NA	NA	NA	NA	NA	4q34.2	NA	NA	NA	NA	rs4538426	0.48	0.48	0.451	0.46246	0.5427	0.3869	0.6239	0.3676	0.4714	0.53	0.39	0.61	0.39	0.5138	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.898274	NA	NA	0.55235	0.36473	NA	0.391	NA	2.39115
1413	17	40720605	40720605	G	A	intronic	MLX	NA	NA	NA	intronic	ENSG00000108788	NA	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs646174	0.49	0.49	0.485	0.523562	0.5229	0.4534	0.4928	0.4864	0.6687	0.53	0.45	0.44	0.51	0.5439	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.37222	NA	NA	0.542326	0.491602	NA	0.616	NA	2.390874
1413	19	1507535	1507535	T	C	intronic	ADAMTSL5	NA	NA	NA	intronic	ENSG00000185761	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs791461	0.53	0.53	0.565	0.534944	0.5586	0.3879	0.4078	0.7171	0.5061	0.55	0.41	0.41	0.72	0.5106	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.048154	NA	NA	0.540126	0.684294	NA	0.623	NA	2.390674
1413	7	64152353	64152353	A	G	intronic	ZNF107	NA	NA	NA	intronic	ENSG00000196247	NA	NA	NA	NA	NA	7q11.21	NA	NA	NA	NA	rs4718101	0.55	0.55	0.529	0.549321	0.5328	0.6825	0.5749	0.4274	0.5757	0.52	0.67	0.56	0.44	0.5472	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.615529	NA	NA	0.529884	0.472764	NA	0.457	NA	2.390116
1413	7	114210814	114210814	T	C	intronic	FOXP2	NA	NA	NA	intronic	ENSG00000128573	NA	NA	NA	NA	NA	7q31.1	NA	NA	NA	NA	rs17137124	0.53	0.53	0.505	0.51857	0.5308	0.747	0.5663	0.2511	0.5982	0.54	0.74	0.54	0.26	0.5544	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.497716	NA	NA	0.525141	0.311258	NA	0.442	NA	2.389659
1413	2	141533662	141533662	T	C	intronic	LRP1B	NA	NA	NA	intronic	ENSG00000168702	NA	NA	NA	Score=588;Name=lod=328	NA	2q22.1	NA	NA	NA	NA	rs996361	0.89	0.89	0.874	0.855232	0.8658	0.999	0.8977	0.7458	0.8139	0.87	1	0.89	0.8	0.8732	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.778207	1.778207	NA	0.871512	0.773718	NA	0.87	NA	2.389488
1413	19	54782420	54782420	G	A	intronic	LILRB2	NA	NA	NA	intronic	ENSG00000131042	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs11666104	0.37	0.37	0.326	0.332668	0.5736	0.0863	0.3847	0.2708	0.3855	0.58	0.04	0.41	0.38	0.4655	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.240589	NA	NA	0.571628	0.381897	NA	0.413	NA	2.389272
1413	19	39328145	39328145	A	C	intronic	HNRNPL	NA	NA	NA	intronic	ENSG00000104824,ENSG00000268083	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs2278010	0.38	0.38	0.343	0.338458	0.5924	0.2351	0.4179	0.1104	0.4356	0.6	0.29	0.43	0.12	0.466	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.610097	NA	NA	0.552442	0.17635	NA	0.391	NA	2.389158
1413	17	4535385	4535385	A	G	intronic	ALOX15	NA	NA	NA	intronic	ENSG00000161905	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs2619112	0.55	0.55	0.549	0.552316	0.5557	0.5625	0.5346	0.5651	0.5337	0.55	0.57	0.54	0.55	0.5339	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.664704	NA	NA	0.521628	0.565592	NA	0.623	NA	2.388772
1413	7	99514417	99514417	A	C	intronic	TRIM4	NA	NA	NA	intronic	ENSG00000146833	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs2571997	0.55	0.55	0.553	0.578474	0.5338	0.2976	0.4597	0.9039	0.5583	0.55	0.28	0.5	0.89	0.5653	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.723842	NA	NA	0.512326	0.816614	NA	0.609	NA	2.388574
1413	2	112705185	112705185	G	T	intronic	MERTK	NA	NA	NA	intronic	ENSG00000153208	NA	NA	NA	NA	NA	2q13	NA	NA	NA	NA	rs3761700	0.44	0.44	0.404	0.492013	0.5447	0.2758	0.5461	0.5166	0.589	0.54	0.22	0.52	0.49	0.5227	0.54	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.070089	NA	NA	0.544333	0.508409	NA	0.486	NA	2.388267
1413	5	180055862	180055862	T	G	intronic	FLT4	NA	NA	NA	intronic	ENSG00000037280	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs383985	0.73	0.73	0.543	0.648363	0.5765	0.8224	0.7075	0.5499	0.6339	0.66	0.93	0.71	0.63	0.6016	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.937968	NA	NA	0.433885	0.374258	NA	0.152	NA	2.388015
1413	19	6452305	6452305	A	G	intronic	SLC25A23	NA	NA	NA	intronic	ENSG00000125648	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs173229	0.49	0.49	0.491	0.52496	0.5	0.3016	0.3329	0.7874	0.5624	0.5	0.32	0.35	0.79	0.5733	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.541802	1.541802	NA	0.538873	0.761699	NA	0.609	NA	2.387827
1413	16	12009781	12009781	G	A	UTR5	GSPT1	NM_002094:c.-204C>T,NM_001130006:c.-204C>T	NA	NA	intronic	ENSG00000103342	NA	NA	NA	NA	NA	16p13.13	NA	Name=GATA-1,TAF1,E2F6_(H-50),E2F6,Pol2,Mxi1_(bHLH),NRSF,Pol2(phosphoS2),TCF4,Max,GR,CHD2_(N-1250),Pol2(b),Sin3Ak-20,ZNF263,Pol2-4H8,ZBTB7A_(SC-34508),CCNT2,c-Myc,HEY1,NFKB,TBP,IRF1	NA	NA	rs434762	0.88	0.88	0.868	0.849641	0.9254	0.9514	0.8689	0.7685	0.7628	0.92	0.93	0.9	0.74	0.908	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.160569	NA	NA	0.945477	0.801941	NA	0.471	NA	2.3877897
1413	4	78870940	78870940	T	A	intronic	MRPL1	NA	NA	NA	intronic	ENSG00000169288	NA	NA	NA	NA	NA	4q21.1	NA	NA	NA	NA	rs4859513	0.45	0.45	0.419	0.417532	0.5626	0.3333	0.5821	0.3026	0.3937	0.55	0.36	0.58	0.29	0.4938	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.572256	NA	NA	0.556163	0.320018	NA	0.478	NA	2.387437
1413	20	3002889	3002889	A	C	intronic	PTPRA	NA	NA	NA	intronic	ENSG00000132670	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs544090	0.75	0.75	0.735	0.771366	0.507	0.8978	0.7363	0.9236	0.7321	0.52	0.92	0.73	0.91	0.6175	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.210856	NA	NA	0.48814	0.843622	NA	0.732	NA	2.38736
1413	17	40735469	40735469	T	G	intronic	FAM134C	NA	NA	NA	intronic	ENSG00000141699	NA	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs1517002	0.5	0.5	0.495	0.530351	0.5239	0.4692	0.4928	0.4985	0.6697	0.53	0.47	0.44	0.53	0.5477	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.847289	NA	NA	0.542674	0.507036	NA	0.616	NA	2.385726
1414	8	39022522	39022522	G	A	intronic	ADAM32	NA	NA	NA	intronic	ENSG00000197140	NA	NA	NA	NA	NA	8p11.22	NA	NA	NA	NA	rs10088854	0.51	0.51	0.479	0.526358	0.5328	0.7004	0.5591	0.2239	0.726	0.54	0.71	0.52	0.22	0.5489	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.958036	NA	NA	0.534172	0.267937	NA	0.543	NA	2.384128
1414	16	58703966	58703966	A	G	intronic	SLC38A7	NA	NA	NA	intronic	ENSG00000103042	NA	NA	NA	NA	NA	16q21	NA	NA	NA	NA	rs9923128	0.65	0.65	0.687	0.667931	0.5408	0.7292	0.4784	0.8812	0.5818	0.56	0.7	0.47	0.87	0.5674	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.93952	NA	NA	0.507791	0.826888	NA	0.565	NA	2.384009
1414	7	4259953	4259953	G	T	intronic	SDK1	NA	NA	NA	intronic	ENSG00000146555	NA	NA	NA	NA	NA	7p22.2	NA	NA	NA	NA	rs13224192	0.48	0.48	0.503	0.488618	0.5755	0.247	0.3545	0.6823	0.4816	0.59	0.24	0.37	0.67	0.5148	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.095239	NA	NA	0.525698	0.623922	NA	0.514	NA	2.384002
1414	17	38153554	38153554	G	C	intronic	PSMD3	NA	NA	NA	intronic	ENSG00000108344	NA	NA	NA	NA	NA	17q21.1	NA	NA	NA	NA	rs2241244	0.55	0.55	0.568	0.550519	0.5358	0.4335	0.5793	0.674	0.499	0.53	0.41	0.6	0.69	0.5447	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.875065	NA	NA	0.536744	0.631639	NA	0.645	NA	2.382756
1414	1	1922303	1922303	C	T	intronic	KIAA1751	NA	NA	NA	intronic	ENSG00000142609	NA	NA	NA	NA	NA	1p36.33	NA	NA	NA	NA	rs13303195	0.63	0.63	0.679	0.649561	0.497	0.6032	0.4568	0.9281	0.6145	0.5	0.63	0.51	0.93	0.5785	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.731952	NA	NA	0.542173	0.862207	NA	0.688	NA	2.382327
1414	15	62223273	62223273	C	T	intronic	VPS13C	NA	NA	NA	intronic	ENSG00000129003	NA	NA	NA	NA	NA	15q22.2	NA	NA	NA	NA	rs9788670	0.55	0.55	0.524	0.550719	0.5308	0.5248	0.6585	0.5401	0.5358	0.53	0.54	0.63	0.53	0.5574	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.036856	2.036856	NA	0.529535	0.549024	NA	0.493	NA	2.382265
1414	17	38145088	38145088	C	G	intronic	PSMD3	NA	NA	NA	intronic	ENSG00000108344	NA	NA	NA	NA	NA	17q21.1	NA	NA	NA	NA	rs9915252	0.55	0.55	0.57	0.550919	0.5358	0.4315	0.5807	0.674	0.502	0.53	0.41	0.6	0.69	0.5455	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.651448	NA	NA	0.537558	0.631639	NA	0.645	NA	2.381142
1414	3	49753003	49753003	T	G	intronic	RNF123	NA	NA	NA	intronic	ENSG00000164068	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs34614773	0.6	0.6	0.548	0.584864	0.5249	0.8304	0.6455	0.3714	0.6391	0.54	0.82	0.66	0.42	0.5807	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.329621	2.329621	NA	0.514884	0.410803	NA	0.609	NA	2.379516
1414	3	49720393	49720393	C	G	intronic	APEH	NA	NA	NA	intronic	ENSG00000164062	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs2960548	0.61	0.61	0.574	0.638978	0.5099	0.9276	0.6816	0.4032	0.7628	0.51	0.93	0.63	0.38	0.5944	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.444536	NA	NA	0.516395	0.431684	NA	0.522	NA	2.379305
1414	3	49736565	49736565	G	A	intronic	RNF123	NA	NA	NA	intronic	ENSG00000164068	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs6785549	0.6	0.6	0.55	0.584665	0.5249	0.8323	0.6455	0.3684	0.6401	0.54	0.83	0.66	0.41	0.5825	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5.118798	5.118798	NA	0.513495	0.407853	NA	0.638	NA	2.379105
1414	15	42138321	42138321	A	G	intronic	JMJD7-PLA2G4B,PLA2G4B	NA	NA	NA	intronic	ENSG00000168970,ENSG00000243708	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs1197670	0.77	0.77	0.73	0.757388	0.8181	0.8879	0.8213	0.5613	0.7802	0.82	0.88	0.81	0.52	0.8032	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.890757	NA	NA	NA	NA	NA	0.674	NA	2.3787
1414	12	122993011	122993011	C	T	intronic	RSRC2	NA	NA	NA	intronic	ENSG00000111011	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs10773230	0.43	0.43	0.416	0.427915	0.5427	0.4365	0.4496	0.2428	0.5358	0.56	0.4	0.41	0.26	0.538	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.529203	NA	NA	0.541047	0.310032	NA	0.449	NA	2.378253
1414	17	28778720	28778720	G	C	intronic	CPD	NA	NA	NA	intronic	ENSG00000108582	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs2253256	0.67	0.67	0.697	0.68131	0.5169	0.8224	0.5317	0.8616	0.5675	0.53	0.79	0.51	0.85	0.5848	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.048185	NA	NA	0.520116	0.805719	NA	0.783	NA	2.378184
1414	9	139396408	139396408	A	G	intronic	NOTCH1	NA	NA	NA	intronic	ENSG00000148400	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs3124594	0.73	0.73	0.718	0.741613	0.5328	0.9226	0.6167	0.9145	0.6247	0.53	0.89	0.64	0.92	0.592	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.038858	NA	NA	0.497214	0.854113	NA	0.732	NA	2.377986
1414	5	149515074	149515074	G	A	intronic	PDGFRB	NA	NA	NA	intronic	ENSG00000113721	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs740750	0.46	0.46	0.415	0.459864	0.5646	0.4306	0.5749	0.261	0.5695	0.56	0.4	0.55	0.3	0.5264	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.529756	NA	NA	0.531628	0.318429	NA	0.341	NA	2.377372
1414	7	130140766	130140766	C	A	intronic	MEST	NA	NA	NA	intronic	ENSG00000106484	NA	NA	NA	NA	NA	7q32.2	NA	NA	NA	NA	rs765205	0.49	0.49	0.453	0.448482	0.5497	0.6121	0.536	0.1573	0.5072	0.54	0.63	0.53	0.21	0.524	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.585649	NA	NA	0.54907	0.227644	NA	0.449	NA	2.37723
1414	6	30571471	30571471	T	C	intronic	PPP1R10	NA	NA	NA	intronic	ENSG00000204569	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs1264423	0.59	0.59	0.621	0.667732	0.5179	0.5853	0.4928	0.8268	0.816	0.51	0.57	0.5	0.8	0.5775	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.794873	NA	NA	0.529083	0.78552	NA	0.688	NA	2.375517
1415	17	3336162	3336162	T	C	downstream	OR1E2	NA	NA	NA	downstream	ENSG00000127780	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs11867612	0.22	0.22	0.185	0.17512	0.4553	0.002	0.2464	0.0643	0.1646	0.45	0.0035	0.27	0.07	0.3512	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.100871	NA	NA	0.485222	0.138573	NA	0.123	NA	2.3749446
1415	1	68943442	68943442	A	G	intronic	DEPDC1	NA	NA	NA	intronic	ENSG00000024526	NA	NA	NA	NA	NA	1p31.2	NA	NA	NA	NA	rs3790476	0.37	0.37	0.385	0.357628	0.5845	0.1329	0.379	0.3623	0.3344	0.56	0.13	0.42	0.34	0.4561	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.359474	1.359474	NA	0.585047	0.392466	NA	0.312	NA	2.374353
1415	3	48415007	48415007	C	G	intronic	FBXW12	NA	NA	NA	intronic	ENSG00000164049	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs4858793	0.58	0.58	0.548	0.569489	0.5268	0.6587	0.6037	0.4274	0.6892	0.54	0.67	0.6	0.5	0.5745	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.254706	NA	NA	0.524767	0.456877	NA	0.493	NA	2.373933
1415	14	69799892	69799892	A	G	intronic	GALNT16	NA	NA	NA	intronic	ENSG00000100626	NA	NA	NA	NA	NA	14q24.1	NA	NA	NA	NA	rs1275677	0.51	0.51	0.476	0.508387	0.5368	0.3621	0.4726	0.705	0.3896	0.51	0.35	0.48	0.71	0.5284	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.151087	NA	NA	0.561163	0.656832	ID=COSM147803;OCCURENCE=1(stomach)	0.514	NA	2.373637
1415	8	143561206	143561206	G	A	intronic	BAI1	NA	NA	NA	intronic	ENSG00000181790	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs4509377	0.72	0.72	0.733	0.743211	0.8151	0.7054	0.6916	0.6536	0.8661	0.83	0.68	0.72	0.62	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.309233	NA	NA	0.811523	0.708199	NA	0.681	NA	2.373377
1415	19	55019402	55019402	A	G	intronic	LAIR2	NA	NA	NA	intronic	ENSG00000167618	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs2277974	0.63	0.63	0.566	0.623602	0.5427	0.7391	0.5836	0.6876	0.5297	0.52	0.75	0.62	0.65	0.5518	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.699181	NA	NA	0.532326	0.665456	NA	0.601	NA	2.373174
1415	16	56442066	56442066	C	T	intronic	AMFR	NA	NA	NA	intronic	ENSG00000159461	NA	NA	NA	NA	NA	16q12.2	NA	NA	NA	NA	rs4238787	0.58	0.58	0.623	0.622204	0.5268	0.4454	0.5231	0.8767	0.6288	0.53	0.47	0.52	0.84	0.573	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.808568	NA	NA	0.527093	0.811419	NA	0.71	NA	2.373107
1415	19	55019438	55019438	A	G	intronic	LAIR2	NA	NA	NA	intronic	ENSG00000167618	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs2277973	0.62	0.62	0.545	0.63139	0.5427	0.7401	0.5836	0.6876	0.5685	0.51	0.74	0.61	0.65	0.5542	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.078224	NA	NA	0.530007	0.672719	NA	0.319	NA	2.373093
1415	2	43902511	43902511	G	C	UTR3	LOC728819	NM_001101330:c.*3C>G	NA	NA	ncRNA_exonic	ENSG00000223658	NA	NA	NA	NA	NA	2p21	NA	NA	NA	NA	rs755862	0.55	0.55	0.555	0.552716	0.7177	0.1875	0.5432	0.6536	0.6299	0.72	0.19	0.61	0.67	0.6884	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.517982	NA	NA	0.720834	0.674603	ID=COSN166079;OCCURENCE=1(NS)	0.551	NA	2.373066
1415	11	5631622	5631622	G	T	intronic	TRIM6,TRIM6-TRIM34	NA	NA	NA	ncRNA_intronic	ENSG00000239920	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs7125403	0.89	0.89	0.861	0.883786	0.994	1	0.9467	0.593	0.999	1	1	0.93	0.54	0.967	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.351191	NA	NA	NA	NA	NA	0.884	NA	2.3723333
1415	17	40721360	40721360	C	A	intronic	MLX	NA	NA	NA	intronic	ENSG00000108788	NA	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs632758	0.53	0.53	0.532	0.585463	0.5229	0.4534	0.5159	0.7088	0.6687	0.53	0.45	0.47	0.7	0.5622	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.807147	NA	NA	0.542907	0.684294	NA	0.667	NA	2.371993
1415	20	42310509	42310509	T	C	intronic	MYBL2	NA	NA	NA	intronic	ENSG00000101057	NA	NA	NA	NA	NA	20q13.12	NA	NA	Name=2	NA	rs442143	0.83	0.83	0.817	0.825679	0.9056	0.7966	0.8213	0.7867	0.8292	0.9	0.77	0.84	0.8	0.8496	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.860377	NA	NA	0.873372	0.815252	NA	0.826	NA	2.371428
1415	12	56088206	56088206	T	C	intronic	ITGA7	NA	NA	NA	intronic	ENSG00000135424	NA	NA	NA	NA	NA	12q13.2	NA	NA	NA	NA	rs7953669	0.67	0.67	0.628	0.703874	0.496	0.9365	0.6758	0.6679	0.7464	0.51	0.93	0.64	0.66	0.6212	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.695386	NA	NA	0.511395	0.667045	NA	0.609	NA	2.371405
1415	1	68943436	68943436	G	A	intronic	DEPDC1	NA	NA	NA	intronic	ENSG00000024526	NA	NA	NA	NA	NA	1p31.2	NA	NA	NA	NA	rs1924542	0.38	0.38	0.39	0.371406	0.5845	0.1329	0.3847	0.4115	0.3344	0.56	0.13	0.43	0.38	0.4588	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.819711	NA	NA	0.585751	0.421161	NA	0.341	NA	2.370949
1415	10	106907586	106907586	C	G	intronic	SORCS3	NA	NA	NA	intronic	ENSG00000156395	NA	NA	NA	NA	NA	10q25.1	NA	NA	NA	NA	rs791126	0.49	0.49	0.484	0.489018	0.5467	0.3492	0.6268	0.4803	0.4877	0.54	0.32	0.64	0.52	0.5376	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.175054	NA	NA	0.545359	0.486836	NA	0.355	NA	2.370341
1415	2	169780366	169780366	T	C	intronic	ABCB11	NA	NA	NA	intronic	ENSG00000073734	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	rs579275	0.48	0.48	0.447	0.497404	0.5338	0.6419	0.5043	0.2239	0.6759	0.53	0.62	0.5	0.22	0.5509	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.302985	NA	NA	0.547089	0.265973	NA	0.348	NA	2.368211
1415	17	15961951	15961951	A	G	intronic	NCOR1	NA	NA	NA	intronic	ENSG00000141027	NA	NA	NA	NA	NA	17p12	NA	NA	NA	NA	rs2157991	0.44	0.44	0.432	0.432308	0.5646	0.2321	0.5058	0.4728	0.3957	0.57	0.21	0.51	0.45	0.5033	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.191057	NA	NA	0.565	0.511807	NA	0.413	NA	2.3671
1415	22	38212762	38212762	A	G	UTR3	GCAT	NM_014291:c.*37A>G	NA	NA	UTR3	ENSG00000100116	ENST00000248924:c.*37A>G	NA	NA	NA	NA	22q13.1	NA	NA	NA	NA	rs13911	0.74	0.74	0.737	0.753794	0.6392	0.8472	0.6643	0.8457	0.7147	0.64	0.85	0.65	0.83	0.6849	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.080325	NA	NA	0.643622	0.822434	NA	0.732	NA	2.3656114
1415	3	183756780	183756780	A	C	UTR3	HTR3D	NM_182537:c.*17A>C,NM_001145143:c.*17A>C,NM_001163646:c.*17A>C	NA	NA	UTR3	ENSG00000186090	ENST00000334128:c.*17A>C,ENST00000382489:c.*17A>C,ENST00000453435:c.*17A>C	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs6765152	0.73	0.73	0.774	0.776358	0.667	0.9177	0.7147	0.8933	0.6288	0.61	0.88	0.65	0.78	0.674	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.279415	NA	NA	0.626977	0.840899	NA	0.768	NA	2.3653564
1416	19	33110149	33110149	T	C	intronic	ANKRD27	NA	NA	NA	intronic	ENSG00000105186	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs28615461	0.46	0.46	0.457	0.459265	0.5636	0.2867	0.3775	0.5129	0.5153	0.58	0.28	0.43	0.51	0.5069	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.627052	NA	NA	0.565349	0.520427	NA	0.536	NA	2.364151
1416	8	6299532	6299532	A	G	intronic	MCPH1	NA	NA	NA	intronic	ENSG00000147316	NA	NA	NA	NA	NA	8p23.1	NA	NA	NA	NA	rs2053618	0.71	0.71	0.668	0.676917	0.8062	0.8036	0.8401	0.3215	0.7781	0.82	0.81	0.85	0.33	NA	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.248245	NA	NA	0.830295	0.407514	NA	0.652	NA	2.363505
1416	14	77755221	77755221	T	G	intronic	POMT2	NA	NA	NA	intronic	ENSG00000009830	NA	NA	NA	NA	NA	14q24.3	NA	NA	NA	NA	rs2287387	0.49	0.49	0.51	0.476438	0.5855	0.4752	0.3242	0.4667	0.4867	0.6	0.47	0.36	0.45	0.5081	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.734681	NA	NA	0.542907	0.480027	ID=COSN164743;OCCURENCE=1(breast)	0.587	NA	2.363493
1416	17	3856615	3856615	A	G	intronic	ATP2A3	NA	NA	NA	intronic	ENSG00000074370	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs1800915	0.56	0.56	0.566	0.54373	0.5308	0.4276	0.6556	0.7088	0.3742	0.54	0.43	0.63	0.68	0.5525	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.047614	NA	NA	0.554186	0.695415	NA	0.543	NA	2.362514
1416	3	124113929	124113929	A	T	intronic	KALRN	NA	NA	NA	intronic	ENSG00000160145	NA	NA	NA	NA	NA	3q21.2	NA	NA	NA	NA	rs482285	0.73	0.73	0.72	0.734026	0.8002	0.7698	0.7248	0.6044	0.8108	0.79	0.76	0.75	0.59	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.720304	3.720304	NA	0.837838	0.632948	NA	0.739	NA	2.361962
1416	13	114514918	114514918	T	A	downstream	TMEM255B	NA	NA	NA	downstream	ENSG00000184497	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs34217684	0.48	0.48	0.317	0.664537	0.5348	0.8056	0.6297	0.6014	0.7628	0.42	0.6	0.48	0.43	0.4786	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00282	NA	NA	0.291435	0.288872	NA	0.232	NA	2.3618316
1416	9	130155331	130155331	A	G	intronic	GARNL3	NA	NA	NA	intronic	ENSG00000136895	NA	NA	NA	NA	NA	9q33.3	NA	NA	NA	NA	rs7864853	0.5	0.5	0.475	0.534744	0.5447	0.6111	0.3905	0.4251	0.6963	0.55	0.59	0.41	0.38	0.5455	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.685438	NA	NA	0.550581	0.459147	NA	0.609	NA	2.359219
1416	17	28407287	28407287	C	T	intronic	EFCAB5	NA	NA	NA	intronic	ENSG00000176927	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs11080114	0.55	0.55	0.581	0.570687	0.5656	0.2897	0.4669	0.9402	0.4397	0.55	0.29	0.48	0.92	0.5322	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.159331	NA	NA	0.543154	0.872156	NA	0.471	NA	2.359046
1416	11	117241760	117241760	T	A	intronic	CEP164	NA	NA	NA	intronic	ENSG00000110274	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs2305826	0.52	0.52	0.527	0.521166	0.5487	0.4345	0.4986	0.5772	0.5225	0.54	0.43	0.54	0.6	0.5285	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.557273	NA	NA	0.564013	0.577465	NA	0.587	NA	2.358787
1416	13	99127252	99127252	C	G	intronic	STK24	NA	NA	NA	intronic	ENSG00000102572	NA	NA	NA	NA	NA	13q32.2	NA	NA	NA	NA	rs9513430	0.47	0.47	0.447	0.458866	0.5557	0.3105	0.4409	0.556	0.3937	0.55	0.28	0.48	0.56	0.5166	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.400049	NA	NA	0.56907	0.552882	NA	0.464	NA	2.35863
1416	3	46963502	46963502	T	C	UTR3	CCDC12	NM_144716:c.*45A>G,NM_001277074:c.*45A>G	NA	NA	UTR3	ENSG00000160799	ENST00000425441:c.*45A>G,ENST00000546280:c.*45A>G,ENST00000292314:c.*45A>G	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs4587	0.66	0.66	0.644	0.652157	0.666	0.4385	0.6571	0.8283	0.6166	0.68	0.47	0.66	0.85	0.6432	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.801653	NA	NA	0.666047	0.803677	NA	0.783	NA	2.3580864
1416	18	43698309	43698309	C	T	intronic	HAUS1	NA	NA	NA	intronic	ENSG00000152240	NA	NA	NA	NA	NA	18q21.1	NA	NA	NA	NA	rs1866321	0.56	0.56	0.57	0.555112	0.5417	0.4563	0.4914	0.7231	0.4888	0.53	0.5	0.52	0.72	0.5444	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.963239	NA	NA	0.55593	0.714253	ID=COSN165652;OCCURENCE=1(breast)	0.703	NA	2.35797
1416	3	126219030	126219030	T	C	intronic	UROC1	NA	NA	NA	intronic	ENSG00000159650	NA	NA	NA	NA	NA	3q21.3	NA	NA	NA	NA	rs13072404	0.53	0.53	0.533	0.533746	0.5477	0.5228	0.5029	0.4743	0.6329	0.55	0.56	0.51	0.47	0.5379	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.741515	NA	NA	0.556538	0.484113	NA	0.572	NA	2.357862
1416	6	44270936	44270936	C	T	intronic	AARS2	NA	NA	NA	intronic	ENSG00000124608,ENSG00000272442	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs325001	0.46	0.46	0.419	0.430511	0.5527	0.4147	0.6066	0.2216	0.4785	0.55	0.44	0.62	0.21	0.5248	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.879683	NA	NA	0.565465	0.271221	NA	0.442	NA	2.357035
1416	19	4475606	4475606	T	C	intronic	HDGFRP2	NA	NA	NA	intronic	ENSG00000167674	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs3816048	0.54	0.54	0.538	0.526957	0.5398	0.3433	0.6066	0.7693	0.319	0.55	0.33	0.56	0.76	0.5407	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.307947	NA	NA	0.562649	0.748522	NA	0.623	NA	2.356851
1416	14	106236128	106236128	T	A	intergenic	ELK2AP,KIAA0125	dist=96984;dist=147710	NA	NA	exonic	ENSG00000211897	NA	unknown	UNKNOWN	NA	NA	14q32.33	NA	NA	NA	NA	rs12890621	0.24	0.24	0.194	0.264577	0.6342	0.0159	0.389	0.025	0.3763	0.52	0.01	0.35	0.02	0.5247	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-3.050634	NA	0.79	0.652318	0.117403	NA	0.225	NA	2.3554487
1416	5	172971	172971	G	A	intronic	PLEKHG4B	NA	NA	NA	intronic	ENSG00000153404	NA	NA	NA	NA	NA	5p15.33	NA	NA	NA	NA	rs6868964	0.44	0.44	0.461	0.456869	0.5338	0.2768	0.4496	0.4932	0.5194	0.53	0.28	0.46	0.48	0.5219	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.812502	NA	NA	0.588953	0.517476	NA	0.543	NA	2.355347
1416	20	36997632	36997632	T	C	intronic	LBP	NA	NA	NA	intronic	ENSG00000129988	NA	NA	NA	NA	NA	20q11.23	NA	NA	NA	NA	rs1780627	0.62	0.62	0.598	0.653355	0.5268	0.8383	0.5375	0.5893	0.7618	0.52	0.84	0.56	0.55	0.5739	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.049578	NA	NA	0.54407	0.570359	NA	0.616	NA	2.35523
1416	1	203740615	203740615	T	C	intronic	LAX1	NA	NA	NA	intronic	ENSG00000122188	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs3737976	0.4	0.4	0.37	0.370208	0.5984	0.1042	0.4582	0.3215	0.4131	0.61	0.09	0.53	0.34	0.499	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.058377	3.058377	NA	0.547558	0.328416	NA	0.428	NA	2.355042
1417	2	201397647	201397647	A	C	intronic	SGOL2	NA	NA	NA	intronic	ENSG00000163535	NA	NA	NA	NA	NA	2q33.1	NA	NA	NA	NA	rs842939	0.69	0.69	0.674	0.700479	0.8241	0.5526	0.7219	0.6573	0.7689	0.82	0.55	0.74	0.61	NA	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.022753	NA	NA	0.820944	0.663813	NA	0.616	NA	2.354956
1417	6	160202167	160202167	G	A	intronic	TCP1	NA	NA	NA	intronic	ENSG00000120438	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs2295899	0.39	0.39	0.363	0.391973	0.5437	0.1637	0.6081	0.2648	0.4898	0.55	0.15	0.59	0.27	0.528	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.336811	NA	NA	0.573605	0.300726	NA	0.348	NA	2.354695
1417	1	7527996	7527996	T	C	intronic	CAMTA1	NA	NA	NA	intronic	ENSG00000171735	NA	NA	NA	NA	NA	1p36.23	NA	NA	NA	NA	rs1201529	0.49	0.49	0.517	0.464058	0.5746	0.2768	0.4035	0.652	0.3323	0.57	0.27	0.45	0.65	0.4988	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.600225	1.600225	NA	0.572209	0.673627	NA	0.623	NA	2.354391
1417	10	22826093	22826093	A	C	UTR3	PIP4K2A	NM_005028:c.*37T>G	NA	NA	UTR3	ENSG00000150867	ENST00000376573:c.*37T>G,ENST00000323883:c.*37T>G,ENST00000545335:c.*37T>G	NA	NA	NA	NA	10p12.2	NA	NA	NA	NA	rs1053454	0.7	0.7	0.686	0.748003	0.6382	0.6528	0.8084	0.8502	0.7781	0.62	0.63	0.81	0.83	0.7174	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.828274	NA	NA	0.623372	0.822969	NA	0.667	NA	2.3543614
1417	1	41475085	41475085	A	G	intronic	CTPS1	NA	NA	NA	intronic	ENSG00000171793	NA	NA	NA	NA	NA	1p34.2	NA	NA	NA	NA	rs12144160	0.49	0.49	0.44	0.467851	0.5507	0.5675	0.6095	0.2141	0.5225	0.55	0.56	0.62	0.24	0.5378	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.782781	NA	NA	0.557442	0.276895	NA	0.543	NA	2.354058
1417	5	14290805	14290805	G	A	intronic	TRIO	NA	NA	NA	intronic	ENSG00000038382	NA	NA	NA	NA	NA	5p15.2	NA	NA	NA	NA	rs30629	0.48	0.48	0.454	0.410743	0.5795	0.5645	0.4524	0.1566	0.3926	0.61	0.58	0.48	0.16	0.5072	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.11833	NA	NA	0.560116	0.211076	NA	0.435	NA	2.353184
1417	8	67357690	67357690	G	T	intronic	ADHFE1	NA	NA	NA	intronic	ENSG00000147576	NA	NA	NA	NA	NA	8q13.1	NA	NA	NA	NA	rs1025228	0.63	0.63	0.629	0.654752	0.5457	0.5942	0.7507	0.7602	0.6186	0.53	0.64	0.7	0.73	0.5846	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.552695	NA	NA	0.516628	0.733318	NA	0.543	NA	2.353072
1417	9	130982416	130982416	C	T	intronic	DNM1	NA	NA	NA	intronic	ENSG00000106976	NA	NA	NA	NA	NA	9q34.11	NA	NA	NA	NA	rs3003606	0.48	0.48	0.416	0.463259	0.5666	0.6121	0.634	0.0817	0.5982	0.57	0.6	0.59	0.11	0.5363	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.608858	NA	NA	0.544302	0.155697	NA	0.464	NA	2.352798
1417	10	12292286	12292286	C	G	intronic	CDC123	NA	NA	NA	intronic	ENSG00000151465	NA	NA	NA	NA	NA	10p13	NA	NA	NA	NA	rs12779647	0.53	0.53	0.489	0.500998	0.5497	0.498	0.5562	0.4221	0.5215	0.55	0.57	0.59	0.43	0.5421	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.047628	NA	NA	0.556163	0.441217	NA	0.5	NA	2.352037
1417	19	16024739	16024739	A	G	intronic	CYP4F11	NA	NA	NA	intronic	ENSG00000171903	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs2072269	0.47	0.47	0.441	0.427117	0.5537	0.2738	0.4625	0.4644	0.3793	0.56	0.3	0.48	0.5	0.5269	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.031238	NA	NA	0.567442	0.504312	NA	0.616	NA	2.351958
1417	17	43163851	43163851	T	C	intronic	NMT1	NA	NA	NA	intronic	ENSG00000136448	NA	NA	NA	NA	NA	17q21.31	NA	NA	NA	NA	rs6503422	0.48	0.48	0.479	0.491014	0.5288	0.2034	0.5259	0.6566	0.5	0.53	0.2	0.52	0.68	0.5514	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.96601	NA	NA	0.568488	0.647753	NA	0.536	NA	2.351312
1417	6	44273546	44273546	A	C	intronic	AARS2	NA	NA	NA	intronic	ENSG00000124608,ENSG00000272442	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs324137	0.47	0.47	0.44	0.447883	0.5537	0.4167	0.6124	0.2829	0.4775	0.55	0.44	0.63	0.27	0.5297	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.726769	NA	NA	0.565581	0.324103	NA	0.471	NA	2.351019
1417	10	124329672	124329672	T	C	intronic	DMBT1	NA	NA	NA	intronic	ENSG00000187908	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs3740220	0.55	0.55	0.059	0.705671	0.6789	0.7758	0.7882	0.612	0.729	0.52	0.63	0.65	0.42	0.7159	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.590563	NA	NA	0.254431	0.201787	NA	NA	NA	2.350769
1417	1	24383819	24383819	T	C	UTR3	MYOM3	NM_152372:c.*35A>G	NA	NA	ncRNA_UTR3	ENSG00000142661	NA	NA	NA	NA	NA	1p36.11	NA	NA	NA	NA	rs7540491	0.72	0.72	0.716	0.692492	0.7276	0.9514	0.5663	0.5303	0.6984	0.73	0.97	0.54	0.53	0.7056	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.024531	NA	NA	0.717587	0.596495	NA	0.652	NA	2.349213
1417	14	75367740	75367740	G	A	intronic	DLST	NA	NA	NA	intronic	ENSG00000119689	NA	NA	NA	NA	NA	14q24.3	NA	NA	NA	NA	rs1799900	0.62	0.62	0.621	0.666334	0.5308	0.4206	0.5749	0.9781	0.7025	0.53	0.46	0.59	0.96	0.5894	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.039707	NA	NA	0.530698	0.897867	NA	0.543	NA	2.349102
1417	3	183777919	183777919	G	A	intronic	HTR3C	NA	NA	NA	intronic	ENSG00000178084	NA	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs6807271	0.59	0.59	0.592	0.555711	0.5676	0.746	0.6715	0.4395	0.4223	0.56	0.75	0.64	0.43	0.5532	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.213509	2.213509	NA	0.530254	0.469119	NA	0.507	NA	2.348946
1417	10	119014931	119014931	C	T	intronic	SLC18A2	NA	NA	NA	intronic	ENSG00000165646	NA	NA	NA	NA	NA	10q25.3	NA	NA	NA	NA	rs363420	0.64	0.64	0.626	0.635383	0.8191	0.4206	0.7378	0.6293	0.6033	0.81	0.41	0.74	0.59	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.114179	NA	NA	0.832181	0.647399	NA	0.688	NA	2.348719
1417	16	3106994	3106994	A	T	intronic	MMP25	NA	NA	NA	ncRNA_intronic	ENSG00000261971	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs1064948	0.79	0.79	0.819	0.799121	0.6531	0.9028	0.7478	0.9213	0.7137	0.66	0.91	0.71	0.93	0.6944	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.571628	NA	NA	0.638533	0.887978	NA	0.703	NA	2.3473003
1417	5	167919623	167919623	T	A	intronic	RARS	NA	NA	NA	intronic	ENSG00000113643	NA	NA	NA	NA	NA	5q34	NA	NA	NA	NA	rs184957	0.66	0.66	0.642	0.630192	0.5159	0.7937	0.7061	0.6694	0.4724	0.51	0.78	0.7	0.7	0.5876	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.895318	NA	NA	0.549302	0.668937	NA	0.471	NA	2.347198
1417	3	130828790	130828790	G	A	intronic	NEK11	NA	NA	NA	intronic	ENSG00000114670	NA	NA	NA	NA	NA	3q22.1	NA	NA	NA	NA	rs9850655	0.41	0.41	0.404	0.400559	0.5696	0.2907	0.4582	0.2322	0.5266	0.56	0.29	0.48	0.27	0.5098	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.072332	NA	NA	0.574221	0.275204	NA	0.471	NA	2.346379
1417	11	72292860	72292860	C	T	intronic	PDE2A	NA	NA	NA	intronic	ENSG00000186642	NA	NA	NA	NA	NA	11q13.4	NA	NA	NA	NA	rs376724	0.67	0.67	0.693	0.674121	0.8201	0.5248	0.5836	0.671	0.7464	0.81	0.48	0.63	0.7	NA	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.501202	NA	NA	0.834381	0.684971	NA	0.681	NA	2.345519
1418	8	6793540	6793540	C	T	UTR3	DEFA4	NM_001925:c.*2G>A	NA	NA	UTR3	ENSG00000164821	ENST00000297435:c.*2G>A	NA	NA	NA	NA	8p23.1	NA	NA	NA	NA	rs736227	0.66	0.66	0.676	0.667532	0.673	0.6151	0.5778	0.7572	0.6585	0.66	0.59	0.64	0.76	0.6382	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.800349	NA	NA	0.678953	0.696323	NA	0.674	NA	2.3431804
1418	19	36015865	36015865	A	C	intronic	SBSN	NA	NA	NA	intronic	ENSG00000189001	NA	NA	NA	NA	NA	19q13.12	NA	NA	NA	NA	rs2285511	0.54	0.54	0.509	0.553115	0.5328	0.5397	0.6124	0.5151	0.5971	0.53	0.55	0.58	0.49	0.5759	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.379653	NA	NA	0.548721	0.555152	NA	0.442	NA	2.342579
1418	17	5308603	5308603	G	A	intronic	NUP88	NA	NA	NA	intronic	ENSG00000108559	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs3026133	0.73	0.73	0.739	0.781949	0.5417	0.9633	0.5677	0.9009	0.8333	0.55	0.96	0.55	0.89	0.6197	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.288755	NA	NA	0.49686	0.839083	NA	0.732	NA	2.34174
1418	13	43935405	43935405	C	T	intronic	ENOX1	NA	NA	NA	intronic	ENSG00000120658	NA	NA	NA	NA	NA	13q14.11	NA	NA	NA	NA	rs1535580	0.48	0.48	0.49	0.491613	0.5686	0.3294	0.438	0.5091	0.5941	0.57	0.33	0.47	0.54	0.5212	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.738916	NA	NA	0.568605	0.504085	NA	0.58	NA	2.341595
1418	6	55216005	55216005	G	A	intronic	GFRAL	NA	NA	NA	intronic	ENSG00000187871	NA	NA	NA	NA	NA	6p12.1	NA	NA	NA	NA	rs870806	0.48	0.48	0.463	0.435503	0.5805	0.5397	0.4107	0.2617	0.4315	0.57	0.48	0.45	0.34	0.5118	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.656932	NA	NA	0.566279	0.308897	NA	0.406	NA	2.341421
1418	2	71747235	71747235	A	G	intronic	DYSF	NA	NA	NA	intronic	ENSG00000135636	NA	NA	NA	NA	NA	2p13.2	NA	NA	NA	NA	rs11675897	0.67	0.67	0.674	0.65595	0.838	0.247	0.7147	0.8933	0.5276	0.83	0.22	0.73	0.9	NA	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.017724	NA	NA	0.821182	0.876445	NA	0.783	NA	2.340818
1418	10	124329673	124329673	C	T	intronic	DMBT1	NA	NA	NA	intronic	ENSG00000187908	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs3740221	0.55	0.55	0.031	0.705671	0.6789	0.7758	0.7882	0.612	0.729	0.53	0.64	0.66	0.42	0.7159	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.615529	NA	NA	0.264442	0.209584	NA	NA	NA	2.340758
1418	11	13716530	13716530	A	G	intronic	FAR1	NA	NA	NA	intronic	ENSG00000197601	NA	NA	NA	NA	NA	11p15.2	NA	NA	NA	NA	rs7130943	0.47	0.47	0.475	0.490815	0.5427	0.2758	0.4798	0.5552	0.5798	0.53	0.27	0.52	0.57	0.5361	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.581569	NA	NA	0.580461	0.547727	NA	0.529	NA	2.340739
1418	5	173200	173200	C	T	intronic	PLEKHG4B	NA	NA	NA	intronic	ENSG00000153404	NA	NA	NA	NA	NA	5p15.33	NA	NA	NA	NA	rs6885136	0.44	0.44	0.445	0.456869	0.5378	0.2798	0.4496	0.4607	0.5562	0.53	0.28	0.46	0.45	0.5291	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.972117	NA	NA	0.592791	0.487971	NA	0.551	NA	2.340309
1418	1	7737799	7737799	A	G	intronic	CAMTA1	NA	NA	NA	intronic	ENSG00000171735	NA	NA	NA	NA	NA	1p36.23	NA	NA	NA	NA	rs3011926	0.59	0.59	0.594	0.591653	0.5686	0.6587	0.5375	0.5855	0.593	0.55	0.65	0.55	0.6	0.5498	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.779855	1.779855	NA	0.541395	0.585338	NA	0.522	NA	2.340205
1418	10	18931512	18931512	T	C	intronic	NSUN6	NA	NA	NA	intronic	ENSG00000241058,ENSG00000271786	NA	NA	NA	NA	NA	10p12.31	NA	NA	NA	NA	rs7907153	0.64	0.64	0.641	0.635383	0.5368	0.9216	0.5749	0.5038	0.6626	0.56	0.95	0.53	0.47	0.5863	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.470021	NA	NA	0.536761	0.548797	NA	0.558	NA	2.340139
1418	4	26364300	26364300	C	G	intronic	RBPJ	NA	NA	NA	intronic	ENSG00000168214	NA	NA	NA	NA	NA	4p15.2	NA	NA	NA	NA	rs13116873	0.49	0.49	0.445	0.485423	0.5507	0.5367	0.6513	0.2504	0.5654	0.56	0.55	0.61	0.21	0.5513	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.2437	1.2437	NA	0.560349	0.301634	NA	0.457	NA	2.337651
1418	6	169620247	169620247	T	C	intronic	THBS2	NA	NA	NA	ncRNA_intronic	ENSG00000226445	NA	NA	NA	NA	NA	6q27	NA	NA	NA	NA	rs9393165	0.66	0.66	0.672	0.685304	0.6491	0.4712	0.7219	0.8888	0.6421	0.65	0.45	0.71	0.88	0.67	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.691023	NA	NA	0.67686	0.847254	NA	0.652	NA	2.3373733
1418	8	143958427	143958427	C	T	intronic	CYP11B1	NA	NA	NA	intronic	ENSG00000104499,ENSG00000160882	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs6387	0.56	0.56	0.549	0.563698	0.5527	0.7589	0.6182	0.3427	0.6339	0.54	0.75	0.58	0.34	0.5688	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.01557	NA	NA	0.541279	0.373581	NA	0.572	NA	2.337221
1418	10	115340492	115340492	G	A	intronic	HABP2	NA	NA	NA	intronic	ENSG00000148702	NA	NA	NA	NA	NA	10q25.3	NA	NA	NA	NA	rs2286742	0.56	0.56	0.506	0.552117	0.5447	0.6567	0.6153	0.4198	0.5859	0.54	0.68	0.62	0.4	0.5695	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.17272	NA	NA	0.548953	0.422833	NA	0.478	NA	2.336847
1418	17	33501432	33501432	C	T	intronic	UNC45B	NA	NA	NA	intronic	ENSG00000141161	NA	NA	NA	NA	NA	17q12	NA	NA	NA	NA	rs1384220	0.58	0.58	0.612	0.571486	0.5537	0.7202	0.4841	0.4985	0.5971	0.56	0.72	0.47	0.52	0.5625	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.05884	NA	NA	0.547326	0.491148	NA	0.609	NA	2.336474
1418	12	1040373	1040373	T	C	intronic	RAD52	NA	NA	NA	intronic	ENSG00000002016	NA	NA	NA	NA	NA	12p13.33	NA	NA	NA	NA	rs7303748	0.52	0.52	0.526	0.544928	0.5636	0.4623	0.4539	0.5681	0.6442	0.56	0.47	0.47	0.55	0.549	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.950833	NA	NA	0.551628	0.550386	NA	0.645	NA	2.335772
1418	20	25398876	25398876	G	C	intronic	GINS1	NA	NA	NA	intronic	ENSG00000101003	NA	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	rs4815425	0.43	0.43	0.435	0.456669	0.5646	0.0893	0.6441	0.531	0.4908	0.54	0.07	0.62	0.52	0.5364	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.680306	NA	NA	0.563605	0.542669	NA	0.507	NA	2.335395
1418	14	99961830	99961830	T	C	intronic	CCNK	NA	NA	NA	intronic	ENSG00000090061	NA	NA	NA	NA	NA	14q32.2	NA	NA	NA	NA	rs2069492	0.44	0.44	0.441	0.447284	0.5716	0.375	0.4092	0.3767	0.5164	0.57	0.34	0.4	0.39	0.5113	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.359157	2.359157	NA	0.581805	0.385016	NA	0.5	NA	2.335295
1419	17	39634576	39634576	T	G	intronic	KRT35	NA	NA	NA	intronic	ENSG00000197079	NA	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs7220061	0.53	0.53	0.518	0.575879	0.5398	0.3403	0.5591	0.7352	0.6524	0.54	0.3	0.61	0.74	0.582	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.347627	NA	NA	0.543488	0.700409	NA	0.594	NA	2.334712
1419	6	33141253	33141253	T	G	intronic	COL11A2	NA	NA	NA	intronic	ENSG00000204248	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs9277932	0.65	0.65	0.612	0.645168	0.5447	0.7867	0.6542	0.612	0.6411	0.55	0.8	0.65	0.62	0.5985	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.463012	NA	NA	0.522093	0.560173	NA	0.63	NA	2.334707
1419	1	15813969	15813969	A	C	intronic	CELA2B	NA	NA	NA	intronic	ENSG00000215704	NA	NA	NA	NA	NA	1p36.21	NA	NA	NA	NA	rs3737704	0.66	0.66	0.678	0.651558	0.5358	0.6776	0.5807	0.9047	0.4519	0.56	0.65	0.6	0.88	0.576	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.292145	NA	NA	0.553953	0.848842	NA	0.536	NA	2.334247
1419	3	39701194	39701194	T	C	intergenic	MOBP,MYRIP	dist=143700;dist=150109	NA	NA	intergenic	ENSG00000230757,ENSG00000170011	dist=14998;dist=149211	NA	NA	NA	NA	3p22.1	NA	NA	NA	NA	rs6787961	0.98	0.98	NA	0.985224	1	1	0.9899	0.9493	1	1	0.99	0.98	0.96	NA	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.807906	NA	NA	NA	NA	NA	0.819	NA	2.3333334
1419	20	53969040	53969040	A	G	intergenic	DOK5,CBLN4	dist=701330;dist=603373	NA	NA	intergenic	ENSG00000185834,ENSG00000224008	dist=277355;dist=67834	NA	NA	NA	NA	20q13.2	NA	NA	NA	NA	rs211904	0.86	0.86	0.96	0.999201	1	1	1	0.997	1	0.88	0.87	0.88	0.8	NA	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.028296	NA	NA	NA	NA	NA	0.935	NA	2.3333334
1419	19	10818092	10818092	G	A	intronic	QTRT1	NA	NA	NA	intronic	ENSG00000213339	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs892085	0.49	0.49	0.463	0.554912	0.5219	0.3641	0.6254	0.6498	0.6074	0.51	0.28	0.59	0.62	0.572	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.695284	NA	NA	0.573488	0.652746	NA	0.551	NA	2.332612
1419	1	153122620	153122620	T	C	intronic	SPRR2G	NA	NA	NA	intronic	ENSG00000159516	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs513555	0.58	0.58	0.586	0.523762	0.5537	0.6091	0.4957	0.4682	0.5	0.55	0.67	0.56	0.51	0.5433	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.065211	NA	NA	0.570465	0.50227	NA	0.543	NA	2.332535
1419	8	28651298	28651298	A	C	intronic	INTS9	NA	NA	NA	intronic	ENSG00000104299	NA	NA	NA	NA	NA	8p21.1	NA	NA	NA	NA	rs2665911	0.38	0.38	NA	0.363019	0.5537	0.1667	0.5101	0.3011	0.3487	0.54	0.18	0.51	0.29	0.4841	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.814261	NA	NA	0.629914	0.326748	NA	0.065	NA	2.332286
1419	5	149602824	149602824	C	T	intronic	CAMK2A	NA	NA	NA	intronic	ENSG00000070808	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs2241695	0.48	0.48	0.477	0.455471	0.5706	0.6349	0.5375	0.1694	0.4806	0.56	0.62	0.52	0.17	0.542	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.576345	1.576345	NA	0.555503	0.231477	NA	0.355	NA	2.331897
1419	9	35093020	35093020	T	C	intronic	PIGO	NA	NA	NA	intronic	ENSG00000165282	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs568300	0.49	0.49	0.45	0.474042	0.5577	0.376	0.6326	0.4017	0.4744	0.56	0.41	0.61	0.39	0.544	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.684893	NA	NA	0.566512	0.426237	NA	0.58	NA	2.331788
1419	15	90177159	90177159	C	T	intronic	KIF7	NA	NA	NA	intronic	ENSG00000166813	NA	NA	NA	NA	NA	15q26.1	NA	NA	NA	NA	rs11633151	0.46	0.46	0.468	0.435903	0.5626	0.3343	0.4452	0.385	0.4724	0.57	0.36	0.5	0.38	0.5321	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.882995	NA	NA	0.574221	0.448182	NA	0.471	NA	2.331079
1419	6	118556628	118556628	T	C	intronic	SLC35F1	NA	NA	NA	intronic	ENSG00000196376	NA	NA	NA	NA	NA	6q22.31	NA	NA	NA	NA	rs9489326	0.43	0.43	0.424	0.420128	0.5885	0.2728	0.4179	0.348	0.498	0.58	0.26	0.46	0.36	0.5099	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.097558	NA	NA	0.570698	0.397139	NA	0.449	NA	2.330902
1419	8	120801805	120801805	C	T	intronic	TAF2	NA	NA	NA	intronic	ENSG00000064313	NA	NA	NA	NA	NA	8q24.12	NA	NA	NA	NA	rs6469846	0.56	0.56	0.539	0.524361	0.5517	0.4296	0.6556	0.5998	0.3988	0.56	0.42	0.64	0.65	0.5559	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.115339	NA	NA	0.562442	0.605992	NA	0.703	NA	2.329958
1419	16	89653032	89653032	G	A	intronic	CPNE7	NA	NA	NA	intronic	ENSG00000178773	NA	NA	NA	NA	NA	16q24.3	NA	NA	NA	NA	rs452176	0.46	0.46	0.412	0.398163	0.5934	0.3105	0.6095	0.2209	0.3773	0.59	0.37	0.65	0.24	0.5128	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.407787	NA	NA	0.564186	0.27343	NA	0.5	NA	2.329614
1419	22	30738737	30738737	G	A	intronic	SF3A1	NA	NA	NA	intronic	ENSG00000099995	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs5753080	0.9	0.9	0.91	0.910543	0.8459	0.9157	0.8573	0.9879	0.9049	0.85	0.91	0.87	0.98	NA	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.135229	NA	NA	0.824639	0.964595	NA	0.949	NA	2.329461
1419	14	105618670	105618670	T	C	intronic	JAG2	NA	NA	NA	ncRNA_intronic	ENSG00000257622	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs2238287	0.69	0.69	0.695	0.689297	0.669	0.5308	0.6599	0.8926	0.6196	0.68	0.58	0.66	0.86	0.6705	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.798155	NA	NA	0.664726	0.841096	NA	0.797	NA	2.3291073
1419	10	74100642	74100642	G	A	intronic	DNAJB12	NA	NA	NA	intronic	ENSG00000148719	NA	NA	NA	NA	NA	10q22.1	NA	NA	NA	NA	rs9416018	0.31	0.31	0.293	0.284545	0.5795	0.0397	0.4121	0.1104	0.3783	0.57	0.06	0.45	0.1	0.4808	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.396162	1.396162	NA	0.611047	0.194054	NA	0.435	NA	2.328653
1419	17	18541775	18541775	A	G	intronic	TBC1D28	NA	NA	NA	intronic	ENSG00000189375	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs9902086	0.68	0.68	0.687	0.717652	0.5497	0.9583	0.6455	0.7405	0.6626	0.49	0.95	0.63	0.67	0.6023	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.89122	NA	NA	0.519389	0.71643	NA	0.58	NA	2.328611
1419	14	24845154	24845154	C	A	intronic	NFATC4	NA	NA	NA	intronic	ENSG00000100968	NA	NA	NA	NA	NA	14q12	NA	NA	NA	NA	rs12880769	0.33	0.33	0.314	0.284545	0.5885	0.1528	0.3876	0.0741	0.319	0.58	0.16	0.42	0.08	0.4804	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.112373	NA	NA	0.603721	0.156605	NA	0.5	NA	2.327379
1419	14	24843699	24843699	C	T	intronic	NFATC4	NA	NA	NA	intronic	ENSG00000100968	NA	NA	NA	NA	NA	14q12	NA	NA	NA	NA	rs12890614	0.33	0.33	0.316	0.284545	0.5885	0.1528	0.3876	0.0741	0.319	0.58	0.16	0.42	0.08	0.4796	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.520497	NA	NA	0.605	0.156832	NA	0.5	NA	2.3269
1419	9	14155769	14155769	T	C	intronic	NFIB	NA	NA	NA	intronic	ENSG00000147862	NA	NA	NA	NA	NA	9p23	NA	NA	NA	NA	rs12349255	0.56	0.56	0.54	0.46865	0.829	0.4881	0.6153	0.0363	0.5583	0.83	0.56	0.68	0.05	NA	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.448215	NA	NA	0.844994	0.153623	NA	0.543	NA	2.326006
1420	20	58420336	58420336	G	A	intronic	PHACTR3	NA	NA	NA	intronic	ENSG00000087495	NA	NA	NA	NA	NA	20q13.33	NA	NA	NA	NA	rs1416388	0.71	0.71	0.738	0.722045	0.5477	0.7569	0.6297	0.9788	0.5838	0.54	0.77	0.64	0.97	0.6042	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.047458	NA	NA	0.523261	0.899909	NA	0.775	NA	2.324839
1420	2	25458546	25458546	C	T	intronic	DNMT3A	NA	NA	NA	intronic	ENSG00000119772	NA	NA	NA	NA	NA	2p23.3	NA	NA	NA	NA	rs2304429	0.4	0.4	0.368	0.360823	0.5785	0.3065	0.5274	0.1014	0.4254	0.59	0.31	0.52	0.14	0.5098	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.875558	NA	NA	0.587442	0.198366	NA	0.348	NA	2.324258
1420	8	36788693	36788693	T	C	intronic	KCNU1	NA	NA	NA	intronic	ENSG00000215262	NA	NA	NA	NA	NA	8p11.23	NA	NA	NA	NA	rs6986249	0.56	0.56	0.54	0.589058	0.5328	0.5724	0.6427	0.5711	0.6503	0.53	0.58	0.65	0.53	0.5778	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.319737	NA	NA	0.565239	0.6042	NA	0.399	NA	2.324161
1420	11	36057626	36057626	G	A	intronic	LDLRAD3	NA	NA	NA	intronic	ENSG00000179241	NA	NA	NA	NA	NA	11p13	NA	NA	NA	NA	rs262451	0.44	0.44	0.402	0.399561	0.5815	0.4147	0.6354	0.1717	0.3374	0.57	0.38	0.62	0.19	0.5203	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.4643	NA	NA	0.574104	0.244096	NA	0.449	NA	2.324096
1420	16	1825768	1825768	A	C	intronic	EME2	NA	NA	NA	intronic	ENSG00000197774	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs2745169	0.39	0.39	0.349	0.333866	0.5775	0.2847	0.5749	0.0938	0.2873	0.57	0.27	0.59	0.11	0.4992	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.535202	NA	NA	0.60014	0.16462	NA	0.348	NA	2.32316
1420	7	83764309	83764309	C	G	intronic	SEMA3A	NA	NA	NA	intronic	ENSG00000075213	NA	NA	NA	NA	NA	7q21.11	NA	NA	NA	NA	rs17241389	0.54	0.54	0.519	0.504792	0.5726	0.6835	0.5706	0.3313	0.4387	0.56	0.69	0.55	0.33	0.5337	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.244281	NA	NA	0.57093	0.383114	NA	0.406	NA	2.32277
1420	8	120795607	120795607	G	A	intronic	TAF2	NA	NA	NA	intronic	ENSG00000064313	NA	NA	NA	NA	NA	8q24.12	NA	NA	NA	NA	rs13268676	0.57	0.57	0.535	0.545327	0.5527	0.4296	0.6585	0.677	0.3988	0.56	0.42	0.64	0.7	0.5621	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.398008	NA	NA	0.562674	0.673627	ID=COSN168404;OCCURENCE=1(large_intestine)	0.703	NA	2.322526
1420	4	7728658	7728658	C	T	intronic	SORCS2	NA	NA	NA	intronic	ENSG00000184985	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs2301745	0.62	0.62	0.661	0.631989	0.5815	0.6062	0.4697	0.8222	0.5685	0.57	0.61	0.52	0.78	0.5529	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.56373	NA	NA	0.543348	0.796296	NA	0.536	NA	2.322252
1420	2	170492567	170492567	A	G	intronic	PPIG	NA	NA	NA	intronic	ENSG00000138398	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	rs2290007	0.55	0.55	0.562	0.584265	0.5378	0.4296	0.4625	0.7595	0.6411	0.54	0.43	0.51	0.71	0.5726	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.850836	NA	NA	0.568187	0.724044	ID=COSN166327;OCCURENCE=1(NS)	0.609	NA	2.321413
1420	8	120814020	120814020	A	G	intronic	TAF2	NA	NA	NA	intronic	ENSG00000064313	NA	NA	NA	NA	NA	8q24.12	NA	NA	NA	NA	rs7813438	0.57	0.57	0.562	0.546326	0.5527	0.4306	0.6585	0.677	0.4029	0.56	0.42	0.64	0.7	0.563	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.321782	NA	NA	0.563023	0.675216	ID=COSN168406;OCCURENCE=1(large_intestine)	0.703	NA	2.321277
1420	22	51011936	51011936	T	C	ncRNA_intronic	CHKB-CPT1B	NA	NA	NA	intronic	ENSG00000205560,ENSG00000254413	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs131760	0.78	0.78	0.773	0.807308	0.6481	0.9732	0.768	0.8071	0.8282	0.64	0.97	0.72	0.81	0.7263	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.108003	NA	NA	0.637674	0.778484	NA	0.775	NA	2.3212593
1420	6	10802101	10802101	G	A	intronic	MAK	NA	NA	NA	intronic	ENSG00000111837,ENSG00000137210,ENSG00000153157,ENSG00000272162	NA	NA	NA	NA	NA	6p24.2	NA	NA	NA	NA	rs4712966	0.47	0.47	0.441	0.420727	0.5795	0.504	0.4971	0.1384	0.499	0.6	0.51	0.53	0.17	0.5231	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.154799	NA	NA	0.577209	0.200635	NA	0.406	NA	2.320191
1420	1	220162195	220162195	T	C	ncRNA_intronic	RNU5F-1	NA	NA	NA	intronic	ENSG00000136628	NA	NA	NA	NA	NA	1q41	NA	NA	NA	NA	rs2254494	0.59	0.59	0.56	0.560304	0.666	0.5804	0.6427	0.3971	0.593	0.66	0.6	0.63	0.43	0.6502	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.155355	NA	NA	0.697026	0.447996	NA	0.565	NA	2.3201073
1420	15	60748810	60748810	T	A	intronic	NARG2	NA	NA	NA	intronic	ENSG00000128915	NA	NA	NA	NA	NA	15q22.2	NA	NA	NA	NA	rs7163427	0.58	0.58	0.27	0.59385	0.5676	0.8254	0.6484	0.2557	0.8006	0.56	0.84	0.63	0.25	0.608	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.376363	NA	NA	0.505233	0.239664	NA	0.036	NA	2.319167
1420	7	83739762	83739762	T	C	intronic	SEMA3A	NA	NA	NA	intronic	ENSG00000075213	NA	NA	NA	NA	NA	7q21.11	NA	NA	NA	NA	rs1990044	0.53	0.53	0.505	0.489816	0.5765	0.7024	0.5793	0.2519	0.4397	0.56	0.71	0.55	0.25	0.5298	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.915489	NA	NA	0.574767	0.305719	NA	0.384	NA	2.318933
1420	9	110081018	110081018	A	G	intronic	RAD23B	NA	NA	NA	intronic	ENSG00000119318	NA	NA	NA	NA	NA	9q31.2	NA	NA	NA	NA	rs1805335	0.61	0.61	0.595	0.579073	0.5726	0.748	0.4899	0.5651	0.4939	0.56	0.76	0.56	0.56	0.5495	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.204608	NA	NA	0.559186	0.542896	NA	0.572	NA	2.318714
1420	11	900929	900929	C	G	intronic	CHID1	NA	NA	NA	intronic	ENSG00000177830	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs10794339	0.63	0.63	0.647	0.677117	0.5358	0.7579	0.5418	0.7088	0.7924	0.53	0.72	0.53	0.73	0.5963	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.433351	NA	NA	0.550128	0.705856	NA	0.558	NA	2.317772
1420	7	50547584	50547584	A	C	intronic	DDC	NA	NA	NA	intronic	ENSG00000132437	NA	NA	NA	NA	NA	7p12.1	NA	NA	NA	NA	rs11575457	0.53	0.53	0.511	0.523762	0.5616	0.4583	0.6167	0.503	0.5143	0.56	0.44	0.67	0.5	0.5527	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.021334	NA	NA	0.568605	0.511121	NA	0.5	NA	2.317095
1420	3	9962157	9962157	T	C	intronic	IL17RC	NA	NA	NA	intronic	ENSG00000163702	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs783494	0.42	0.42	0.433	0.415136	0.5746	0.0962	0.4611	0.553	0.3609	0.58	0.07	0.46	0.54	0.562	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.450584	NA	NA	0.547708	0.53612	NA	0.37	NA	2.315692
1420	12	117013730	117013730	G	C	UTR5	MAP1LC3B2	NM_001085481:c.-18G>C	NA	NA	UTR5	ENSG00000171471	ENST00000306985:c.-18G>C,ENST00000556529:c.-18G>C	NA	NA	NA	NA	12q24.22	NA	NA	NA	NA	rs7303998	0.51	0.51	0.502	0.521765	0.7038	0.2788	0.4669	0.5545	0.5798	0.71	0.26	0.51	0.51	0.6077	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.853533	NA	NA	0.706512	0.578075	NA	0.406	NA	2.3153214
1420	20	2552926	2552926	T	C	intronic	TMC2	NA	NA	NA	intronic	ENSG00000149488	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs1883980	0.52	0.52	0.489	0.523962	0.5716	0.4931	0.6225	0.3366	0.6902	0.59	0.48	0.63	0.38	0.5592	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.515332	NA	NA	0.553953	0.361779	ID=COSN166460;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.58	NA	2.315247
1420	19	3207348	3207348	G	C	intronic	NCLN	NA	NA	NA	intronic	ENSG00000125912	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs312069	0.66	0.66	0.64	0.67472	0.5586	0.8909	0.5447	0.6233	0.7331	0.56	0.91	0.55	0.61	0.5919	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.548432	NA	NA	0.534302	0.632093	NA	0.638	NA	2.315198
1421	10	123243197	123243197	G	A	intronic	FGFR2	NA	NA	NA	intronic	ENSG00000066468	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs2278202	0.42	0.42	0.368	0.423123	0.5398	0.3333	0.6888	0.1082	0.6329	0.56	0.38	0.65	0.1	0.5614	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.909121	NA	NA	0.583837	0.20177	ID=COSN163794;OCCURENCE=1(breast)	0.449	NA	2.314963
1421	3	16450872	16450872	T	C	intronic	RFTN1	NA	NA	NA	intronic	ENSG00000131378	NA	NA	NA	NA	NA	3p24.3	NA	NA	NA	NA	rs1546650	0.61	0.61	0.621	0.63099	0.5517	0.5942	0.5591	0.7988	0.5746	0.52	0.62	0.57	0.76	0.5627	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.532769	NA	NA	0.571512	0.748298	NA	0.645	NA	2.314088
1421	3	123666192	123666192	C	T	intronic	CCDC14	NA	NA	NA	intronic	ENSG00000175455	NA	NA	NA	NA	NA	3q21.1	NA	NA	NA	NA	rs17375977	0.33	0.33	0.299	0.315296	0.5696	0.0982	0.4063	0.1747	0.4029	0.56	0.08	0.47	0.17	0.4968	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.558302	1.558302	NA	0.619907	0.264532	NA	0.333	NA	2.313693
1421	3	29529907	29529907	G	A	intronic	RBMS3	NA	NA	NA	intronic	ENSG00000144642	NA	NA	NA	NA	NA	3p24.1	NA	NA	NA	NA	rs2371695	0.56	0.56	NA	0.544728	0.5795	0.4603	0.6037	0.6036	0.4744	0.58	0.5	0.59	0.58	0.5476	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.160499	NA	NA	0.559302	0.596232	NA	0.674	NA	2.313598
1421	14	62550877	62550877	G	A	intronic	SYT16	NA	NA	NA	intronic	ENSG00000139973	NA	NA	NA	NA	NA	14q23.2	NA	NA	NA	NA	rs2353778	0.51	0.51	0.484	0.520567	0.5666	0.5129	0.6326	0.3079	0.6892	0.57	0.53	0.63	0.33	0.564	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.281915	NA	NA	0.558114	0.326153	NA	0.587	NA	2.311286
1421	11	822622	822622	A	G	intronic	PNPLA2	NA	NA	NA	intronic	ENSG00000177666	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs7942159	0.51	0.51	0.439	0.442492	0.5736	0.2817	0.683	0.4902	0.2382	0.57	0.33	0.65	0.51	0.5342	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.583817	NA	NA	0.581414	0.515909	NA	0.449	NA	2.310786
1421	9	130984430	130984430	C	A	intronic	DNM1	NA	NA	NA	intronic	ENSG00000106976	NA	NA	NA	NA	NA	9q34.11	NA	NA	NA	NA	rs3003608	0.57	0.57	0.551	0.58127	0.5666	0.6865	0.6556	0.4569	0.6033	0.57	0.66	0.62	0.45	0.5764	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.135205	NA	NA	0.546744	0.501816	NA	0.565	NA	2.310256
1421	18	6898415	6898415	C	T	intronic	ARHGAP28	NA	NA	NA	intronic	ENSG00000088756	NA	NA	NA	NA	NA	18p11.31	NA	NA	NA	NA	rs12185460	0.56	0.56	0.569	0.528355	0.5676	0.6052	0.5173	0.4508	0.5215	0.55	0.68	0.54	0.46	0.5607	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.423373	NA	NA	0.561744	0.47685	NA	0.536	NA	2.309956
1421	10	119014023	119014023	C	T	intronic	SLC18A2	NA	NA	NA	intronic	ENSG00000165646	NA	NA	NA	NA	NA	10q25.3	NA	Name=NRSF	NA	NA	rs2072362	0.85	0.85	0.838	0.841054	0.9125	0.7004	0.915	0.9266	0.7444	0.91	0.68	0.88	0.92	0.8774	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.069577	NA	NA	0.900233	0.921471	NA	0.848	NA	2.309867
1421	7	87180198	87180198	C	T	intronic	ABCB1	NA	NA	NA	intronic	ENSG00000085563	NA	NA	NA	NA	NA	7q21.12	NA	NA	NA	NA	rs10276036	0.56	0.56	0.578	0.567692	0.5845	0.373	0.5893	0.8064	0.4131	0.57	0.34	0.56	0.81	0.5379	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.026494	NA	NA	0.569667	0.727273	NA	0.594	NA	2.307933
1421	21	38302769	38302769	C	T	intronic	HLCS	NA	NA	NA	intronic	ENSG00000159267	NA	NA	NA	NA	NA	21q22.13	NA	NA	NA	NA	rs2073425	0.57	0.57	0.56	0.559704	0.5467	0.625	0.6585	0.466	0.5624	0.56	0.61	0.65	0.48	0.5863	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.352072	NA	NA	0.559767	0.501816	NA	0.616	NA	2.307233
1421	19	15072787	15072787	A	T	UTR3	SLC1A6	NM_001272088:c.*23T>A,NM_001272087:c.*23T>A	NA	NA	UTR3	ENSG00000105143	ENST00000544886:c.*23T>A,ENST00000598504:c.*23T>A	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs3827000	0.73	0.73	0.738	0.755591	0.67	0.7222	0.7262	0.8684	0.7464	0.66	0.71	0.72	0.85	0.6989	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.591142	NA	NA	0.657674	0.836813	NA	0.768	NA	2.3067594
1421	5	127622983	127622983	C	T	intronic	FBN2	NA	NA	NA	intronic	ENSG00000138829	NA	NA	NA	NA	NA	5q23.3	NA	NA	NA	NA	rs2042327	0.37	0.37	0.357	0.357628	0.5934	0.2004	0.5749	0.0832	0.4939	0.61	0.19	0.54	0.1	0.5184	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.069154	NA	NA	0.581744	0.173854	NA	0.268	NA	2.306456
1421	17	76134828	76134828	C	A	intronic	TMC8	NA	NA	NA	intronic	ENSG00000167895	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs7221365	0.6	0.6	0.611	0.601837	0.5547	0.4167	0.6499	0.8003	0.5389	0.56	0.46	0.68	0.75	0.5816	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.181917	NA	NA	0.557674	0.750567	NA	0.529	NA	2.306026
1421	6	160201295	160201295	C	A	ncRNA_exonic	SNORA20	NA	NA	NA	ncRNA_exonic	ENSG00000207392	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs2295901	0.73	0.73	0.715	0.753594	0.7952	0.5893	0.8732	0.7141	0.8487	0.8	0.57	0.87	0.71	0.7914	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.857049	NA	NA	0.774485	0.687215	NA	0.645	NA	2.3055816
1422	19	3641672	3641672	C	T	intronic	PIP5K1C	NA	NA	NA	intronic	ENSG00000186111	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs3815338	0.49	0.49	0.487	0.468251	0.5726	0.3601	0.6095	0.4153	0.4438	0.58	0.36	0.6	0.43	0.5497	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.331844	NA	NA	0.57304	0.448025	NA	0.551	NA	2.30466
1422	5	169031218	169031218	G	T	UTR3	SPDL1	NM_017785:c.*7G>T	NA	NA	UTR3	ENSG00000040275	ENST00000265295:c.*7G>T	NA	NA	NA	NA	5q35.1	NA	NA	NA	NA	rs2042248	0.67	0.67	0.672	0.676717	0.672	0.7331	0.6023	0.6619	0.6963	0.69	0.72	0.6	0.63	0.6677	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.207873	NA	NA	0.690233	0.6532	NA	0.601	NA	2.3034004
1422	6	114279783	114279783	A	T	intronic	HDAC2	NA	NA	NA	intronic	ENSG00000196591	NA	NA	NA	NA	NA	6q21	NA	NA	NA	NA	rs2243356	0.55	0.55	0.523	0.553914	0.5696	0.6954	0.5202	0.4002	0.6237	0.56	0.68	0.51	0.39	0.5614	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.009203	NA	NA	0.565642	0.439924	NA	0.5	NA	2.303358
1422	21	46952094	46952094	T	C	intronic	SLC19A1	NA	NA	NA	intronic	ENSG00000173638	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs914231	0.51	0.51	0.458	0.514377	0.5557	0.4722	0.5865	0.4017	0.6166	0.57	0.47	0.57	0.42	0.5606	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.115476	NA	NA	0.580784	0.443938	NA	0.341	NA	2.302916
1422	18	6890591	6890591	C	T	intronic	ARHGAP28	NA	NA	NA	intronic	ENSG00000088756	NA	NA	NA	NA	NA	18p11.31	NA	NA	NA	NA	rs1116756	0.59	0.59	0.586	0.562101	0.5686	0.6052	0.5331	0.5696	0.5215	0.55	0.68	0.55	0.57	0.5671	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.476241	NA	NA	0.561889	0.572888	NA	0.572	NA	2.302411
1422	20	2315929	2315929	C	T	intronic	TGM3	NA	NA	NA	intronic	ENSG00000125780	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs2076406	0.64	0.64	0.606	0.678115	0.5318	0.8909	0.6081	0.5877	0.7812	0.51	0.87	0.6	0.58	0.6143	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.394235	NA	NA	0.55186	0.588743	NA	0.645	NA	2.30204
1422	20	60971327	60971327	A	C	intronic	CABLES2	NA	NA	NA	intronic	ENSG00000149679	NA	NA	NA	NA	NA	20q13.33	NA	NA	NA	NA	rs748037	0.53	0.53	0.552	0.570288	0.5885	0.1617	0.5764	0.8949	0.5297	0.57	0.12	0.6	0.88	0.5411	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.038189	NA	NA	0.569651	0.832728	NA	0.63	NA	2.300749
1422	9	132381749	132381749	G	A	intronic	C9orf50	NA	NA	NA	intronic	ENSG00000148335,ENSG00000179058	NA	NA	NA	NA	NA	9q34.11	NA	NA	NA	NA	rs4240434	0.48	0.48	0.431	0.447684	0.5577	0.505	0.4928	0.2874	0.4601	0.57	0.5	0.51	0.28	0.5302	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.136449	NA	NA	0.612558	0.330685	NA	0.37	NA	2.299542
1422	10	61802550	61802550	A	T	intronic	ANK3	NA	NA	NA	intronic	ENSG00000151150	NA	NA	NA	NA	NA	10q21.2	NA	NA	NA	NA	rs9888033	0.61	0.61	0.603	0.611821	0.5497	0.7579	0.5375	0.6233	0.5624	0.56	0.74	0.54	0.6	0.576	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.340475	1.340475	NA	0.574767	0.610304	NA	0.471	NA	2.299533
1422	17	48652875	48652875	A	G	intronic	CACNA1G	NA	NA	NA	intronic	ENSG00000006283	NA	NA	NA	NA	NA	17q21.33	NA	NA	NA	NA	rs198550	0.68	0.68	0.699	0.696086	0.5368	0.9355	0.6282	0.6611	0.7086	0.54	0.94	0.59	0.67	0.6267	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.836357	NA	NA	0.536976	0.64945	NA	0.587	NA	2.299524
1422	11	65004301	65004301	G	T	intergenic	SLC22A20,POLA2	dist=10790;dist=25131	NA	NA	ncRNA_exonic	ENSG00000197847	NA	NA	NA	Score=346;Name=lod=34	NA	11q13.1	NA	NA	NA	NA	rs2904982	0.91	0.91	0.912	0.880192	0.9026	0.9385	0.8963	0.8828	0.7822	0.91	0.92	0.89	0.89	0.8923	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.74174	NA	0	0.905856	0.881661	NA	0.906	NA	2.299244
1422	5	132038199	132038199	C	T	intronic	KIF3A	NA	NA	NA	ncRNA_intronic	ENSG00000230612	NA	NA	NA	NA	NA	5q31.1	NA	NA	NA	NA	rs3213639	0.47	0.47	0.448	0.478834	0.7177	0.1667	0.5144	0.3737	0.6718	0.71	0.17	0.57	0.38	0.6086	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.671062	NA	NA	0.708653	0.381698	NA	0.616	NA	2.2983803
1422	12	78511755	78511755	T	C	intronic	NAV3	NA	NA	NA	intronic	ENSG00000067798	NA	NA	NA	NA	NA	12q21.2	NA	NA	NA	NA	rs300442	0.78	0.78	0.744	0.736422	0.8419	0.6895	0.8256	0.7443	0.6022	0.85	0.65	0.85	0.76	NA	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.163292	NA	NA	0.860121	0.769977	NA	0.783	NA	2.297979
1422	22	23090423	23090423	G	C	intergenic	GGTLC2,MIR650	dist=100055;dist=74847	NA	NA	downstream	ENSG00000211665	NA	NA	NA	NA	NA	22q11.22	NA	NA	NA	NA	rs34605189	0.48	0.48	0.374	0.596246	0.6193	0.6399	0.647	0.4773	0.6524	0.53	0.51	0.48	0.36	0.5836	0.53	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.877959	NA	NA	NA	NA	NA	0.442	NA	2.2971
1422	5	64890479	64890479	A	C	intronic	TRIM23	NA	NA	NA	intronic	ENSG00000113595	NA	NA	NA	NA	NA	5q12.3	NA	NA	NA	NA	rs36135	0.56	0.56	0.19	0.497804	0.5547	0.3859	0.4597	0.5227	0.5481	0.64	0.41	0.52	0.63	0.6302	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.200349	NA	NA	0.518148	0.497957	NA	0.732	NA	2.296952
1422	12	123460962	123460962	T	C	intronic	OGFOD2	NA	NA	NA	ncRNA_intronic	ENSG00000256028	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs884956	0.54	0.54	0.467	0.485224	0.6918	0.6637	0.6023	0.0605	0.5798	0.71	0.64	0.62	0.08	0.6304	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.442662	1.442662	NA	0.714268	0.191355	NA	0.471	NA	2.2968653
1422	3	61734539	61734539	T	C	intronic	PTPRG	NA	NA	NA	intronic	ENSG00000144724	NA	NA	NA	NA	NA	3p14.2	NA	NA	NA	NA	rs3821880	0.61	0.61	0.593	0.596046	0.5706	0.7302	0.5418	0.5454	0.591	0.56	0.76	0.58	0.55	0.5753	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.605895	NA	NA	0.557558	0.550613	NA	0.63	NA	2.296542
1422	15	33191023	33191023	A	G	intronic	FMN1	NA	NA	NA	intronic	ENSG00000248905	NA	NA	NA	NA	NA	15q13.3	NA	NA	NA	NA	rs173224	0.61	0.61	0.64	0.657748	0.5616	0.5129	0.4971	0.9531	0.6207	0.54	0.51	0.48	0.95	0.5795	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.832399	NA	NA	0.562849	0.887985	NA	0.616	NA	2.296051
1422	6	30890871	30890871	T	C	intronic	VARS2	NA	NA	NA	intronic	ENSG00000137411	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs753725	0.58	0.58	0.536	0.615815	0.5596	0.8413	0.6297	0.3585	0.7791	0.58	0.8	0.6	0.3	0.6056	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.811547	NA	NA	0.538959	0.376159	NA	0.616	NA	2.295841
1423	1	183101686	183101686	G	A	intronic	LAMC1	NA	NA	NA	intronic	ENSG00000135862	NA	NA	NA	NA	NA	1q25.3	NA	NA	NA	NA	rs12095664	0.53	0.53	0.496	0.531749	0.5636	0.628	0.6254	0.3321	0.6033	0.57	0.58	0.58	0.38	0.5725	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.229423	NA	NA	0.569186	0.374262	NA	0.464	NA	2.294714
1423	17	15968143	15968143	T	C	intronic	NCOR1	NA	NA	NA	intronic	ENSG00000141027	NA	NA	NA	NA	NA	17p12	NA	NA	NA	NA	rs2285583	0.55	0.55	0.578	0.583067	0.5706	0.2808	0.5389	0.888	0.5266	0.58	0.26	0.54	0.88	0.5579	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.086856	NA	NA	0.57686	0.847254	ID=COSN165345;OCCURENCE=1(breast)	0.58	NA	2.29464
1423	18	28916290	28916290	G	A	intronic	DSG1	NA	NA	NA	intronic	ENSG00000134760	NA	NA	NA	NA	NA	18q12.1	NA	NA	NA	NA	rs6506917	0.48	0.48	0.467	0.541733	0.5885	0.131	0.402	0.7723	0.7045	0.59	0.12	0.46	0.76	0.5546	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.946836	NA	NA	0.562646	0.70953	NA	0.587	NA	2.294254
1423	12	123343571	123343571	T	G	intronic	HIP1R	NA	NA	NA	intronic	ENSG00000130787	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs2343110	NA	NA	NA	0.785942	0.8648	0.7639	0.928	0.7337	0.6973	NA	NA	NA	NA	0.8411	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.664719	NA	NA	NA	NA	NA	NA	NA	2.2941
1423	4	109735133	109735133	T	C	intronic	COL25A1	NA	NA	NA	intronic	ENSG00000188517	NA	NA	NA	NA	NA	4q25	NA	NA	NA	NA	rs2305436	0.5	0.5	0.466	0.485423	0.5805	0.5258	0.5259	0.2912	0.5798	0.61	0.47	0.53	0.35	0.5554	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.118358	NA	NA	0.571059	0.331382	NA	0.399	NA	2.293041
1423	11	108722851	108722851	C	G	intronic	DDX10	NA	NA	NA	intronic	ENSG00000178105	NA	NA	NA	NA	NA	11q22.3	NA	NA	NA	NA	rs10890899	0.39	0.39	0.342	0.369209	0.5447	0.4028	0.5403	0.031	0.4898	0.55	0.4	0.52	0.05	0.558	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.027397	NA	NA	0.604632	0.133348	NA	0.37	NA	2.292668
1423	8	145771211	145771211	C	G	intronic	ARHGAP39	NA	NA	NA	intronic	ENSG00000147799	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs2721161	0.59	0.59	0.55	0.61262	0.5338	0.6181	0.5605	0.6959	0.6125	0.53	0.59	0.58	0.68	0.6078	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.581052	NA	NA	0.566021	0.65569	NA	0.572	NA	2.292379
1423	1	183095234	183095234	A	G	intronic	LAMC1	NA	NA	NA	intronic	ENSG00000135862	NA	NA	NA	NA	NA	1q25.3	NA	NA	NA	NA	rs1886501	0.53	0.53	0.509	0.531749	0.5636	0.628	0.6254	0.3321	0.6033	0.57	0.58	0.58	0.38	0.5748	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.358559	2.358559	NA	0.569419	0.374489	NA	0.457	NA	2.292181
1423	20	25320228	25320228	T	A	intronic	ABHD12	NA	NA	NA	intronic	ENSG00000100997	NA	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	rs6050544	0.47	0.47	0.446	0.485224	0.5716	0.0893	0.6571	0.6263	0.4918	0.57	0.07	0.65	0.63	0.5717	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.432952	NA	NA	0.565043	0.628995	NA	0.551	NA	2.291657
1423	12	51722311	51722311	C	T	UTR3	CELA1	NM_001971:c.*50G>A	NA	NA	UTR3	ENSG00000139610	ENST00000293636:c.*50G>A	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs7138439	0.64	0.64	0.646	0.622005	0.6938	0.6528	0.5605	0.5038	0.7198	0.72	0.68	0.59	0.53	0.6634	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.712694	NA	NA	0.685349	0.529505	NA	0.565	NA	2.2907844
1423	8	27369334	27369334	A	G	intronic	EPHX2	NA	NA	NA	intronic	ENSG00000120915	NA	NA	NA	NA	NA	8p21.2	NA	NA	NA	NA	rs7816586	0.65	0.65	0.671	0.680911	0.5487	0.6042	0.4942	0.9713	0.636	0.54	0.59	0.55	0.95	0.5842	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.217416	NA	NA	0.576512	0.896959	NA	0.797	NA	2.290588
1423	9	136584196	136584196	T	G	intronic	SARDH	NA	NA	NA	intronic	ENSG00000123453	NA	NA	NA	NA	NA	9q34.2	NA	NA	NA	NA	rs2027963	0.55	0.55	0.537	0.526757	0.5577	0.5565	0.5965	0.4871	0.4683	0.56	0.56	0.62	0.49	0.5661	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.520527	NA	NA	0.585814	0.515887	ID=COSN168695;OCCURENCE=1(large_intestine)	0.464	NA	2.290386
1423	21	42818106	42818106	C	T	intronic	MX1	NA	NA	NA	intronic	ENSG00000157601	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs467773	0.43	0.43	0.429	0.46246	0.5885	0.2857	0.4496	0.4455	0.547	0.56	0.23	0.46	0.44	0.5321	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.031298	NA	NA	0.58909	0.449841	NA	0.478	NA	2.29031
1423	6	147635385	147635385	C	G	intronic	STXBP5	NA	NA	NA	intronic	ENSG00000164506	NA	NA	NA	NA	NA	6q24.3	NA	NA	NA	NA	rs1039083	0.5	0.5	0.49	0.508786	0.5686	0.3056	0.598	0.5658	0.5164	0.58	0.32	0.56	0.55	0.5508	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.006976	NA	NA	0.591628	0.544773	NA	0.442	NA	2.288972
1423	1	19595892	19595892	G	A	ncRNA_intronic	AKR7L	NA	NA	NA	intronic	ENSG00000211454	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs6665423	0.66	0.66	0.646	0.666134	0.6918	0.8016	0.7349	0.3986	0.8129	0.68	0.81	0.72	0.41	0.6896	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.497537	NA	NA	0.663419	0.436416	NA	0.428	NA	2.2885143
1423	2	11718591	11718591	C	T	intronic	GREB1	NA	NA	NA	intronic	ENSG00000196208	NA	NA	NA	NA	NA	2p25.1	NA	NA	NA	NA	rs1529868	0.52	0.52	0.493	0.529752	0.5507	0.5486	0.4957	0.4652	0.6002	0.57	0.52	0.5	0.47	0.5759	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.732832	NA	NA	0.585	0.481389	NA	0.529	NA	2.2884
1423	5	149435759	149435759	G	A	intronic	CSF1R	NA	NA	NA	intronic	ENSG00000182578	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs216136	0.42	0.42	0.391	0.394169	0.5785	0.4593	0.4366	0.0983	0.5072	0.6	0.43	0.46	0.11	0.5308	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.049557	NA	NA	0.603488	0.177939	ID=COSN167607;OCCURENCE=1(large_intestine)	0.406	NA	2.287212
1423	6	90605836	90605836	T	A	downstream	GJA10	NA	NA	NA	UTR3	ENSG00000135355	ENST00000369352:c.*17T>A	NA	NA	NA	NA	6q15	NA	NA	NA	NA	rs7738845	0.71	0.71	0.708	0.710264	0.5408	0.9266	0.7406	0.7405	0.5992	0.54	0.94	0.74	0.7	0.6328	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.285322	NA	NA	0.539455	0.71425	NA	0.645	NA	2.286945
1423	18	54354074	54354074	C	T	intronic	WDR7	NA	NA	NA	intronic	ENSG00000091157	NA	NA	NA	NA	NA	18q21.31	NA	NA	NA	NA	rs1943016	0.76	0.76	NA	0.730431	0.8579	0.9573	0.8674	0.2602	0.9039	0.88	0.97	0.87	0.27	0.8554	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.661184	NA	NA	NA	NA	NA	0.652	NA	2.2867
1423	2	44079004	44079004	T	C	intronic	ABCG8	NA	NA	NA	intronic	ENSG00000143921	NA	NA	NA	NA	NA	2p21	NA	NA	NA	NA	rs4148214	0.65	0.65	0.632	0.683706	0.5388	0.8581	0.5476	0.6989	0.729	0.56	0.86	0.51	0.66	0.6177	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.392206	NA	NA	0.557326	0.66818	NA	0.623	NA	2.286174
1423	13	32828553	32828553	A	G	intronic	FRY	NA	NA	NA	intronic	ENSG00000073910	NA	NA	NA	NA	NA	13q13.1	NA	NA	NA	NA	rs2157961	0.48	0.48	0.45	0.459265	0.5954	0.4841	0.5504	0.1944	0.5869	0.59	0.49	0.57	0.22	0.5374	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.73603	1.73603	NA	0.581546	0.275927	NA	0.435	NA	2.285654
1423	9	113141815	113141815	A	G	intronic	SVEP1	NA	NA	NA	intronic	ENSG00000165124	NA	NA	NA	NA	NA	9q31.3	NA	NA	NA	NA	rs992883	0.48	0.48	0.474	0.497204	0.5696	0.251	0.4769	0.6286	0.5133	0.55	0.24	0.5	0.62	0.5469	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.796902	NA	NA	0.598037	0.635602	NA	0.558	NA	2.285463
1423	11	9081926	9081926	C	T	intronic	SCUBE2	NA	NA	NA	ncRNA_intronic	ENSG00000253973	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs7112378	0.59	0.59	0.548	0.596645	0.6759	0.6984	0.7305	0.264	0.7648	0.68	0.66	0.71	0.27	0.6764	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.60933	NA	NA	0.695764	0.341663	NA	0.507	NA	2.2852693
1423	12	125435388	125435388	C	T	intronic	DHX37	NA	NA	NA	intronic	ENSG00000150990	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs10773125	0.57	0.57	0.518	0.58746	0.5706	0.7917	0.6239	0.3086	0.7454	0.57	0.81	0.62	0.28	0.5946	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.494865	NA	NA	0.549767	0.332728	NA	0.413	NA	2.285033
1424	1	154401972	154401972	T	C	intronic	IL6R	NA	NA	NA	intronic	ENSG00000160712	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs6694817	0.58	0.58	0.576	0.569888	0.5567	0.4345	0.6816	0.6891	0.4826	0.54	0.48	0.66	0.7	0.5713	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.190297	2.190297	NA	0.58724	0.676941	NA	0.645	NA	2.28476
1424	19	7621648	7621648	C	T	intronic	PNPLA6	NA	NA	NA	intronic	ENSG00000032444	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs489056	0.39	0.39	0.396	0.379593	0.6004	0.2034	0.4813	0.2262	0.4693	0.59	0.19	0.52	0.23	0.5143	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.403189	NA	NA	0.600814	0.289605	NA	0.326	NA	2.284486
1424	7	75183403	75183403	A	G	intronic	HIP1	NA	NA	NA	intronic	ENSG00000127946	NA	NA	NA	NA	NA	7q11.23	NA	NA	NA	NA	rs1167807	0.68	0.68	0.672	0.675919	0.5318	0.6726	0.6945	0.8707	0.5511	0.54	0.68	0.69	0.88	0.6247	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.01885	2.01885	NA	0.561047	0.805266	NA	0.594	NA	2.282453
1424	18	14538010	14538010	T	C	intronic	POTEC	NA	NA	NA	intronic	ENSG00000183206	NA	NA	NA	NA	NA	18p11.21	NA	NA	NA	NA	rs6505912	0.43	0.43	0.42	0.317292	0.5934	0.128	0.4035	0.2201	0.2986	0.67	0.14	0.5	0.33	0.4748	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.530987	NA	NA	0.65022	0.320087	NA	0.007	NA	2.28158
1424	4	88959381	88959381	G	A	intronic	PKD2	NA	NA	NA	intronic	ENSG00000118762	NA	NA	NA	NA	NA	4q22.1	NA	NA	NA	NA	rs2725221	0.69	0.69	0.685	0.696286	0.5736	0.6558	0.6412	0.947	0.5644	0.59	0.65	0.65	0.94	0.6039	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.153189	NA	NA	0.541977	0.888561	NA	0.703	NA	2.280523
1424	9	137686906	137686906	C	T	intronic	COL5A1	NA	NA	NA	intronic	ENSG00000130635	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs4072883	0.68	0.68	0.723	0.691693	0.5358	0.8284	0.5476	0.8616	0.5838	0.55	0.82	0.56	0.83	0.6113	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.901944	2.901944	NA	0.572558	0.830232	NA	0.717	NA	2.280342
1424	17	72939663	72939663	G	A	intronic	OTOP3	NA	NA	NA	intronic	ENSG00000182938	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs8069015	0.53	0.53	0.508	0.526558	0.5895	0.4911	0.6542	0.4115	0.5634	0.6	0.46	0.63	0.42	0.5637	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.382543	NA	NA	0.566744	0.452111	NA	0.522	NA	2.280056
1424	2	1437410	1437410	C	T	intronic	TPO	NA	NA	NA	intronic	ENSG00000115705	NA	NA	NA	NA	NA	2p25.3	NA	NA	NA	NA	rs4927578	0.49	0.49	0.457	0.4373	0.5547	0.6151	0.4986	0.2322	0.3671	0.58	0.6	0.52	0.21	0.5671	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.279979	NA	NA	0.599093	0.293463	NA	0.406	NA	2.279107
1424	14	57082648	57082648	A	G	intronic	TMEM260	NA	NA	NA	intronic	ENSG00000070269	NA	NA	NA	NA	NA	14q22.3	NA	NA	NA	NA	rs2275024	0.55	0.55	0.571	0.597244	0.5666	0.4365	0.4179	0.8207	0.6196	0.57	0.4	0.45	0.77	0.5743	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.940169	1.940169	NA	0.581047	0.794825	NA	0.667	NA	2.278053
1424	20	45923383	45923383	G	T	intronic	ZMYND8	NA	NA	NA	intronic	ENSG00000101040	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs2076402	0.55	0.55	0.55	0.551518	0.5835	0.5625	0.487	0.5113	0.6074	0.59	0.57	0.51	0.52	0.5603	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.478836	NA	NA	0.579186	0.527916	NA	0.594	NA	2.277014
1424	7	150490431	150490431	C	G	intronic	TMEM176B	NA	NA	NA	intronic	ENSG00000106565	NA	NA	NA	NA	NA	7q36.1	NA	NA	NA	NA	rs2072442	0.55	0.55	0.529	0.53774	0.5825	0.6101	0.4568	0.4811	0.5511	0.56	0.65	0.46	0.48	0.5648	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.206581	NA	NA	0.576512	0.492283	NA	0.413	NA	2.276188
1424	21	31859677	31859677	G	A	upstream	KRTAP19-2	NA	NA	NA	UTR5	ENSG00000186965	ENST00000334055:c.-10C>T	NA	NA	NA	NA	21q22.11	NA	NA	NA	NA	rs6516970	0.53	0.53	0.519	0.553714	0.5716	0.3185	0.6383	0.6301	0.6145	0.55	0.33	0.64	0.65	0.5675	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.862456	NA	NA	0.584767	0.607127	NA	0.645	NA	2.276133
1424	6	170597276	170597276	C	T	intronic	DLL1	NA	NA	NA	intronic	ENSG00000198719	NA	NA	NA	NA	NA	6q27	NA	NA	NA	NA	rs2738822	0.41	0.41	0.383	0.396765	0.5974	0.0982	0.5288	0.3782	0.4294	0.59	0.07	0.56	0.41	0.5195	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.177897	NA	0	0.607209	0.410123	NA	0.486	NA	2.275891
1425	16	81954789	81954789	C	G	intronic	PLCG2	NA	NA	NA	intronic	ENSG00000197943	NA	NA	NA	NA	NA	16q23.3	NA	NA	NA	NA	rs12446127	0.56	0.56	0.545	0.519768	0.5567	0.7788	0.7032	0.171	0.5562	0.57	0.79	0.66	0.22	0.5893	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.300872	NA	NA	0.580464	0.220065	NA	0.601	NA	2.273536
1425	11	123504959	123504959	C	G	intronic	SCN3B	NA	NA	NA	intronic	ENSG00000166257	NA	NA	NA	NA	NA	11q24.1	NA	NA	NA	NA	rs1148110	0.71	0.71	0.743	0.750599	0.5467	0.7222	0.6225	0.972	0.7812	0.54	0.75	0.65	0.96	0.6276	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.0967	NA	NA	0.552338	0.896685	NA	0.674	NA	2.273362
1425	11	7847523	7847523	T	A	upstream	OR5P3	NA	NA	NA	ncRNA_intronic	ENSG00000254951,ENSG00000271758	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs1482794	0.49	0.49	0.435	0.444688	0.6282	0.4762	0.5937	0.0734	0.6196	0.66	0.5	0.61	0.13	0.5861	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.429247	NA	NA	0.679262	0.291862	NA	0.464	NA	2.2731046
1425	18	21400005	21400005	A	C	intronic	LAMA3	NA	NA	NA	intronic	ENSG00000053747	NA	NA	NA	NA	NA	18q11.2	NA	NA	NA	NA	rs7244406	0.39	0.39	0.376	0.345847	0.6093	0.2014	0.4063	0.2042	0.3722	0.61	0.2	0.46	0.22	0.4971	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.123169	NA	NA	0.621282	0.295478	NA	0.413	NA	2.272318
1425	17	72939446	72939446	C	T	intronic	OTOP3	NA	NA	NA	intronic	ENSG00000182938	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs4789110	0.54	0.54	0.519	0.541334	0.5905	0.4911	0.6571	0.4637	0.5654	0.6	0.46	0.64	0.47	0.5693	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.828042	NA	NA	0.568372	0.504539	NA	0.543	NA	2.271828
1425	9	73461558	73461558	G	C	intronic	TRPM3	NA	NA	NA	intronic	ENSG00000083067	NA	NA	NA	NA	NA	9q21.12	NA	NA	NA	NA	rs10868907	0.49	0.49	0.443	0.520767	0.5835	0.2738	0.5591	0.5885	0.592	0.58	0.24	0.59	0.57	0.5556	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.695973	NA	NA	0.589419	0.560372	NA	0.565	NA	2.271481
1425	3	125775428	125775428	G	A	UTR5	SLC41A3	NM_001008487:c.-33C>T	NA	NA	UTR5	ENSG00000114544	ENST00000383598:c.-33C>T	NA	NA	NA	NA	3q21.2	NA	NA	NA	NA	rs6438964	0.65	0.65	0.636	0.64996	0.664	0.6627	0.6873	0.5719	0.7014	0.67	0.65	0.69	0.59	0.6908	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.331345	1.331345	NA	0.707093	0.579664	NA	0.681	NA	2.2714404
1425	12	88473049	88473049	C	T	intronic	CEP290	NA	NA	NA	intronic	ENSG00000198707	NA	NA	NA	NA	NA	12q21.32	NA	NA	NA	NA	rs2468245	0.78	0.78	0.738	0.764577	0.9225	0.9673	0.8804	0.3253	0.9049	0.92	0.96	0.87	0.32	0.8841	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.255587	NA	NA	0.922934	0.424491	NA	0.623	CLINSIG=probable-non-pathogenic;CLNDBN=not_specified;CLNREVSTAT=single;CLNACC=RCV000114200.2;CLNDSDB=.;CLNDSDBID=.	2.270466
1425	15	60742063	60742063	G	T	intronic	NARG2	NA	NA	NA	intronic	ENSG00000128915	NA	NA	NA	NA	NA	15q22.2	NA	NA	NA	NA	rs1869484	0.58	0.58	0.549	0.592452	0.5706	0.8214	0.6499	0.2511	0.7996	0.57	0.84	0.64	0.25	0.6184	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.469392	NA	NA	0.541053	0.274179	NA	0.391	NA	2.269947
1425	9	126146197	126146197	C	G	intronic	DENND1A	NA	NA	NA	intronic	ENSG00000119522	NA	NA	NA	Score=403;Name=lod=58	NA	9q33.3	NA	NA	NA	NA	rs2808411	0.9	0.9	0.902	0.88738	0.9205	0.9653	0.8703	0.8033	0.8988	0.92	0.96	0.88	0.81	0.8919	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.147002	NA	NA	0.918023	0.822288	NA	0.891	NA	2.269577
1425	16	56441862	56441862	A	G	intronic	AMFR	NA	NA	NA	intronic	ENSG00000159461	NA	NA	NA	NA	NA	16q12.2	NA	NA	NA	NA	rs2920704	0.64	0.64	0.669	0.699681	0.5527	0.6091	0.5663	0.8994	0.7689	0.56	0.6	0.56	0.86	0.6128	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.491635	1.491635	NA	0.565	0.850318	NA	0.739	NA	2.2695
1425	3	12845158	12845158	G	A	intronic	CAND2	NA	NA	NA	intronic	ENSG00000144712	NA	NA	NA	NA	NA	3p25.2	NA	NA	NA	NA	rs9835677	0.41	0.41	0.414	0.360224	0.6451	0.1796	0.4164	0.3268	0.2587	0.64	0.16	0.4	0.35	0.487	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.324724	NA	NA	0.598991	0.380822	NA	0.442	NA	2.268909
1425	13	111117745	111117745	C	T	intronic	COL4A2	NA	NA	NA	intronic	ENSG00000134871	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs3803236	0.52	0.52	0.517	0.513978	0.5954	0.3006	0.5115	0.6702	0.4407	0.59	0.28	0.56	0.67	0.5383	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.349845	NA	NA	0.59769	0.648066	NA	0.551	NA	2.26861
1425	19	57954628	57954628	G	A	intronic	ZNF749	NA	NA	NA	intronic	ENSG00000186230,ENSG00000268163	NA	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs7249430	0.59	0.59	0.572	0.597843	0.5547	0.7073	0.6369	0.4085	0.7577	0.56	0.77	0.58	0.45	0.6115	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.241965	NA	NA	0.565248	0.439146	NA	0.543	NA	2.268552
1425	2	219305404	219305404	G	C	intronic	VIL1	NA	NA	NA	intronic	ENSG00000127831	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs2305833	0.52	0.52	0.459	0.503794	0.5915	0.7698	0.5865	0.0651	0.6738	0.6	0.75	0.59	0.07	0.5648	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.090328	NA	NA	0.575698	0.160009	NA	0.355	NA	2.268002
1425	3	47539969	47539969	C	T	intronic	ELP6	NA	NA	NA	intronic	ENSG00000163832	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs13059519	0.48	0.48	0.446	0.458666	0.6034	0.4643	0.5202	0.239	0.5573	0.6	0.46	0.52	0.29	0.5408	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.138058	2.138058	NA	0.587882	0.275105	NA	0.536	NA	2.267918
1425	3	170885097	170885097	C	T	intronic	TNIK	NA	NA	NA	intronic	ENSG00000154310	NA	NA	NA	NA	NA	3q26.2	NA	NA	NA	NA	rs2292005	0.59	0.59	0.558	0.56869	0.5795	0.8532	0.5937	0.2965	0.6145	0.59	0.83	0.58	0.33	0.5825	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.208831	NA	NA	0.570135	0.325518	NA	0.471	NA	2.267865
1425	19	10165932	10165932	A	G	ncRNA_exonic	C3P1	NA	NA	NA	ncRNA_exonic	ENSG00000167798	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs8113341	0.8	0.8	0.82	0.800919	0.8082	0.5744	0.8242	0.9955	0.7474	0.82	0.62	0.81	0.99	0.7997	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.214559	NA	0.69	0.79145	0.948463	NA	0.906	NA	2.2673166
1425	21	46078220	46078220	T	C	UTR3	KRTAP12-3	NM_198697:c.*33T>C	NA	NA	UTR3	ENSG00000205439	ENST00000397907:c.*33T>C	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs9306112	0.72	0.72	0.701	0.740815	0.6998	0.6627	0.7104	0.82	0.7781	0.71	0.64	0.73	0.82	0.7046	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.323717	NA	NA	0.661849	0.809642	NA	0.565	NA	2.2670844
1425	5	132039132	132039132	C	A	intronic	KIF3A	NA	NA	NA	ncRNA_intronic	ENSG00000230612	NA	NA	NA	NA	NA	5q31.1	NA	NA	NA	NA	rs2285700	0.47	0.47	0.477	0.477436	0.7177	0.1667	0.5159	0.3684	0.6708	0.71	0.17	0.57	0.37	0.6084	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.700187	NA	NA	0.740689	0.404134	NA	0.638	NA	2.2665443
1425	16	55844617	55844617	G	A	intronic	CES1	NA	NA	NA	intronic	ENSG00000198848	NA	NA	NA	NA	NA	16q12.2	NA	NA	NA	NA	rs2244614	0.41	0.41	0.364	0.364417	0.6133	0.1865	0.5317	0.2345	0.3487	0.62	0.19	0.56	0.24	0.5122	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.975975	NA	NA	0.609302	0.291856	NA	0.319	NA	2.265198
1426	3	172365619	172365619	G	A	intronic	NCEH1	NA	NA	NA	intronic	ENSG00000144959	NA	NA	NA	NA	NA	3q26.31	NA	NA	NA	NA	rs9865941	0.56	0.56	0.579	0.592053	0.5537	0.5407	0.6153	0.6634	0.5716	0.53	0.49	0.61	0.66	0.5987	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.11921	NA	NA	0.582652	0.66763	NA	0.623	NA	2.264948
1426	1	1918488	1918488	A	G	intronic	KIAA1751	NA	NA	NA	downstream	ENSG00000142609	NA	NA	NA	NA	NA	1p36.33	NA	NA	NA	NA	rs4350140	0.61	0.61	0.639	0.630591	0.4831	0.5278	0.4467	0.9395	0.6012	0.48	0.56	0.5	0.95	0.5607	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.252085	NA	NA	0.52503	0.877017	NA	0.659	NA	2.2645033
1426	2	138030271	138030271	G	A	intronic	THSD7B	NA	NA	NA	intronic	ENSG00000144229	NA	NA	NA	NA	NA	2q22.1	NA	NA	NA	NA	rs10182152	0.72	0.72	0.705	0.717053	0.5666	0.9583	0.6758	0.6687	0.7178	0.55	0.96	0.7	0.7	0.6237	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.767388	NA	NA	0.545577	0.656911	NA	0.674	NA	2.264123
1426	2	140992337	140992337	C	A	intronic	LRP1B	NA	NA	NA	intronic	ENSG00000168702	NA	NA	NA	NA	NA	2q22.1	NA	NA	NA	NA	rs13387241	0.47	0.47	0.456	0.467452	0.5934	0.5069	0.5288	0.3245	0.4468	0.55	0.51	0.5	0.29	0.5495	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.464176	2.464176	NA	0.59351	0.406945	NA	0.384	NA	2.26359
1426	1	38327982	38327982	G	T	UTR3	INPP5B	NM_005540:c.*5C>A	NA	NA	UTR3	ENSG00000204084	ENST00000373023:c.*5C>A,ENST00000373027:c.*5C>A,ENST00000373026:c.*5C>A,ENST00000373024:c.*5C>A	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	rs3843	0.57	0.57	0.543	0.525559	0.7266	0.4802	0.6009	0.3011	0.6155	0.74	0.52	0.59	0.34	0.6405	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.653242	NA	NA	0.703609	0.384368	NA	0.551	NA	2.2626244
1426	16	570454	570454	T	C	intronic	RAB11FIP3	NA	NA	NA	intronic	ENSG00000090565	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs11863276	0.76	0.76	0.745	0.791534	0.5398	0.9911	0.6902	0.8404	0.8507	0.56	0.99	0.68	0.84	0.6597	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.620708	NA	NA	0.53814	0.768287	NA	0.543	NA	2.26236
1426	2	185798504	185798504	A	C	intronic	ZNF804A	NA	NA	NA	intronic	ENSG00000170396	NA	NA	NA	NA	NA	2q32.1	NA	NA	NA	NA	rs4667000	0.55	0.55	0.502	0.48722	0.5825	0.8244	0.6326	0.0582	0.5184	0.61	0.84	0.61	0.08	0.5788	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.088307	NA	NA	0.576413	0.141201	NA	0.449	NA	2.262287
1426	2	9496291	9496291	T	C	intronic	ASAP2	NA	NA	NA	intronic	ENSG00000151693	NA	NA	NA	NA	NA	2p25.1	NA	NA	NA	NA	rs2709591	0.53	0.53	0.532	0.570288	0.5785	0.1359	0.5317	0.938	0.5399	0.57	0.14	0.52	0.92	0.5601	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.633655	NA	NA	0.599419	0.87517	NA	0.594	NA	2.261981
1426	12	96387621	96387621	A	G	intronic	HAL	NA	NA	NA	intronic	ENSG00000084110	NA	NA	NA	NA	NA	12q23.1	NA	NA	NA	NA	rs2302629	0.56	0.56	0.59	0.579673	0.5835	0.497	0.3862	0.789	0.5153	0.6	0.46	0.4	0.75	0.5648	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.846395	NA	NA	0.590719	0.740118	NA	0.529	NA	2.260981
1426	16	3075999	3075999	C	G	intronic	THOC6	NA	NA	NA	intronic	ENSG00000131652	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs2245000	0.55	0.55	0.566	0.55611	0.5696	0.3046	0.5663	0.767	0.5092	0.56	0.31	0.58	0.79	0.5845	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.735438	NA	NA	0.585116	0.744086	NA	0.717	NA	2.260784
1426	2	201464295	201464295	T	C	intronic	AOX1	NA	NA	NA	intronic	ENSG00000138356	NA	NA	NA	NA	NA	2q33.1	NA	NA	NA	NA	rs10179964	0.64	0.64	0.624	0.608626	0.5785	0.7401	0.5692	0.6392	0.4908	0.58	0.74	0.59	0.66	0.5755	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.199236	NA	NA	0.585233	0.602587	NA	0.703	NA	2.260767
1426	12	10746385	10746385	G	A	ncRNA_exonic	KLRAP1	NA	NA	NA	ncRNA_exonic	ENSG00000256667	NA	NA	NA	NA	NA	12p13.2	NA	NA	NA	NA	rs2244387	0.86	0.86	0.851	0.866214	0.7783	0.9663	0.8646	0.8699	0.8497	0.77	0.97	0.84	0.88	0.8279	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.241666	NA	NA	0.799953	0.856332	NA	0.79	NA	2.2605136
1426	17	39726276	39726276	C	A	intronic	KRT9	NA	NA	NA	intronic	ENSG00000171403	NA	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs3816510	0.66	0.66	0.631	0.663139	0.5616	0.9444	0.7161	0.444	0.7362	0.56	0.95	0.67	0.45	0.6289	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.7839	1.7839	NA	0.55	0.452565	NA	0.63	NA	2.2595
1426	3	100374740	100374740	T	C	intronic	GPR128	NA	NA	NA	intronic	ENSG00000144820	NA	NA	NA	NA	NA	3q12.2	NA	NA	NA	NA	rs9866111	0.45	0.45	0.401	0.495008	0.5736	0.4266	0.6052	0.2186	0.7802	0.57	0.38	0.61	0.22	0.5726	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.393562	NA	NA	0.594673	0.263504	ID=COSM149437;OCCURENCE=1(stomach)	0.297	NA	2.259127
1426	9	117073006	117073006	C	T	downstream	COL27A1	NA	NA	NA	UTR3	ENSG00000196739	ENST00000356083:c.*31C>T,ENST00000494090:c.*3051C>T	NA	NA	NA	NA	9q32	NA	NA	NA	NA	rs1249756	0.64	0.64	0.652	0.641573	0.5586	0.6161	0.6931	0.7337	0.592	0.55	0.67	0.65	0.74	0.6038	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.662516	NA	NA	0.579651	0.704948	NA	0.623	NA	2.257949
1426	10	12126490	12126490	A	T	intronic	DHTKD1	NA	NA	NA	intronic	ENSG00000181192	NA	NA	NA	NA	NA	10p14	NA	NA	NA	NA	rs11257527	0.46	0.46	0.451	0.482827	0.5915	0.4792	0.4669	0.2027	0.7648	0.59	0.48	0.49	0.23	0.5613	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.257816	NA	NA	0.589302	0.26305	NA	0.377	NA	2.257898
1426	5	33615904	33615904	G	A	intronic	ADAMTS12	NA	NA	NA	intronic	ENSG00000151388	NA	NA	NA	NA	NA	5p13.3	NA	NA	NA	NA	rs10057235	0.56	0.56	0.558	0.521965	0.6173	0.4415	0.5994	0.6165	0.3241	0.62	0.46	0.58	0.58	0.535	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.560263	NA	NA	0.59	0.618021	NA	0.558	NA	2.2577
1426	19	54197633	54197633	A	G	upstream	MIR519B,MIR526B	NA	NA	NA	upstream	ENSG00000207580,ENSG00000207825	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs10413288	0.6	0.6	0.622	0.65016	0.4533	0.6448	0.5	0.9024	0.6237	0.45	0.64	0.48	0.88	0.517	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.846021	NA	NA	0.439001	0.834503	NA	0.71	NA	2.2573656
1426	1	95358096	95358096	A	G	intronic	SLC44A3	NA	NA	NA	intronic	ENSG00000143036	NA	NA	NA	NA	NA	1p21.3	NA	NA	NA	NA	rs859063	0.5	0.5	0.469	0.452676	0.6014	0.4157	0.5144	0.3253	0.4663	0.6	0.45	0.56	0.38	0.5409	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.360602	NA	NA	0.600698	0.368815	NA	0.442	NA	2.257002
1426	15	99456253	99456253	T	C	intronic	IGF1R	NA	NA	NA	intronic	ENSG00000140443	NA	NA	NA	NA	NA	15q26.3	NA	NA	NA	NA	rs2272037	0.52	0.52	0.468	0.511182	0.5845	0.6746	0.6239	0.2141	0.589	0.58	0.68	0.6	0.19	0.5775	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.577606	NA	NA	0.581685	0.249886	NA	0.572	NA	2.256315
1426	2	141528592	141528592	T	C	intronic	LRP1B	NA	NA	NA	intronic	ENSG00000168702	NA	NA	NA	NA	NA	2q22.1	NA	NA	NA	NA	rs7599219	0.89	0.89	0.873	NA	NA	NA	NA	NA	NA	0.87	1	0.89	0.8	0.8727	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.128305	NA	NA	0.871279	0.774172	NA	0.862	NA	2.256021
1426	3	42448296	42448296	T	C	intronic	LYZL4	NA	NA	NA	intronic	ENSG00000157093	NA	NA	NA	NA	NA	3p22.1	NA	NA	NA	NA	rs33518	0.61	0.61	0.62	0.597843	0.5815	0.4375	0.5231	0.9017	0.4223	0.59	0.43	0.53	0.9	0.5691	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.281548	NA	NA	0.593488	0.847708	NA	0.514	NA	2.255912
1426	1	212900487	212900487	A	G	UTR3	NSL1	NM_015471:c.*11263T>C,NM_001042549:c.*11552T>C	NA	NA	exonic	ENSG00000117697	NA	synonymous SNV	ENSG00000117697:ENST00000366978:exon5:c.T225C:p.V75V	NA	NA	1q32.3	NA	NA	NA	NA	rs2244935	0.92	0.92	0.928	0.909944	0.9155	0.8938	0.9611	0.907	0.8885	0.92	0.9	0.94	0.93	0.9154	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.584978	NA	NA	0.913317	0.916667	NA	0.942	NA	2.255783
1426	1	34071434	34071434	C	T	intronic	CSMD2	NA	NA	NA	intronic	ENSG00000121904	NA	NA	NA	NA	NA	1p35.1	NA	NA	NA	NA	rs1874044	0.54	0.54	0.485	0.527756	0.5755	0.5516	0.6873	0.3487	0.5828	0.58	0.58	0.66	0.35	0.5932	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.140188	NA	NA	0.576047	0.412165	NA	0.478	NA	2.255253
1427	2	182413602	182413602	A	T	intronic	CERKL	NA	NA	NA	intronic	ENSG00000188452	NA	NA	NA	NA	NA	2q31.3	NA	NA	NA	NA	rs13003064	0.58	0.58	0.56	0.647963	0.5447	0.621	0.6282	0.6127	0.8436	0.54	0.6	0.58	0.63	0.6181	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.425823	NA	NA	0.582326	0.614163	NA	0.616	NA	2.254874
1427	5	147554889	147554889	A	C	intronic	SPINK14	NA	NA	NA	intronic	ENSG00000196800	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs10052031	0.55	0.55	0.545	0.522963	0.6004	0.3998	0.4424	0.618	0.499	0.61	0.43	0.5	0.63	0.5815	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.086303	NA	NA	0.563751	0.593309	NA	0.645	NA	2.254349
1427	17	39724047	39724047	T	C	intronic	KRT9	NA	NA	NA	intronic	ENSG00000171403	NA	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs1008753	0.66	0.66	0.633	0.666134	0.5626	0.9444	0.7205	0.4523	0.7362	0.56	0.95	0.68	0.46	0.6314	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.049858	NA	NA	0.552362	0.46362	NA	0.63	NA	2.253638
1427	2	179667090	179667090	C	T	intronic	TTN	NA	NA	NA	intronic	ENSG00000155657	NA	NA	NA	NA	NA	2q31.2	NA	NA	NA	NA	rs3816849	0.69	0.69	0.692	0.703474	0.5616	0.8571	0.6873	0.7262	0.6718	0.56	0.86	0.64	0.72	0.6475	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.673344	NA	NA	0.538372	0.721062	NA	0.681	NA	2.252528
1427	16	3097596	3097596	T	A	intronic	MMP25	NA	NA	NA	intronic	ENSG00000008516	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs3743936	0.56	0.56	0.593	0.565296	0.5666	0.3274	0.5677	0.7874	0.5072	0.55	0.33	0.58	0.8	0.5893	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.820831	NA	NA	0.592485	0.767548	NA	0.725	NA	2.251615
1427	15	62211450	62211450	G	A	intronic	VPS13C	NA	NA	NA	intronic	ENSG00000129003	NA	NA	NA	NA	NA	15q22.2	NA	NA	NA	NA	rs963024	0.64	0.64	0.646	0.673123	0.5706	0.7688	0.5879	0.6921	0.7147	0.57	0.76	0.54	0.69	0.6036	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.418238	NA	NA	0.5755	0.685429	NA	0.681	NA	2.2503
1427	6	42931261	42931261	C	G	intronic	GNMT	NA	NA	NA	intronic	ENSG00000124713	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs2296804	0.61	0.61	0.633	0.647364	0.5885	0.3075	0.6095	0.9788	0.637	0.6	0.33	0.59	0.96	0.5897	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.357754	NA	NA	0.574419	0.914435	NA	0.732	NA	2.247381
1427	2	215928972	215928972	G	C	intronic	ABCA12	NA	NA	NA	intronic	ENSG00000144452	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs1523721	0.66	0.66	0.662	0.624201	0.5885	0.6627	0.5504	0.8177	0.4121	0.59	0.67	0.56	0.8	0.5776	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.526728	NA	NA	0.587695	0.751475	NA	0.623	NA	2.246205
1427	7	6084310	6084310	G	T	intronic	EIF2AK1	NA	NA	NA	intronic	ENSG00000086232	NA	NA	NA	NA	NA	7p22.1	NA	NA	NA	NA	rs511969	0.6	0.6	0.617	0.582867	0.5984	0.4702	0.5879	0.7254	0.4867	0.59	0.5	0.59	0.71	0.5637	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.910711	NA	NA	0.591977	0.681798	NA	0.594	NA	2.245923
1427	11	46105688	46105688	G	A	intronic	PHF21A	NA	NA	NA	intronic	ENSG00000135365	NA	NA	NA	NA	NA	11p11.2	NA	NA	Name=4	NA	rs2932515	0.92	0.92	0.916	0.908147	0.9125	0.998	0.9438	0.8283	0.8937	0.92	1	0.95	0.81	0.9207	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.823287	NA	NA	0.921493	0.839391	NA	0.848	NA	2.245307
1428	6	40399446	40399446	T	C	intronic	LRFN2	NA	NA	NA	intronic	ENSG00000156564	NA	NA	NA	NA	NA	6p21.2	NA	NA	NA	NA	rs7775772	0.66	0.66	0.625	0.609824	0.5895	0.6825	0.6643	0.7572	0.318	0.59	0.69	0.63	0.73	0.5945	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.468159	NA	NA	0.571279	0.727871	NA	0.696	NA	2.244721
1428	3	49365269	49365269	C	T	intronic	USP4	NA	NA	NA	intronic	ENSG00000114316	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs6795772	0.63	0.63	0.602	0.663339	0.5666	0.9296	0.6787	0.3616	0.8855	0.56	0.92	0.65	0.39	0.6302	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.283515	NA	NA	0.558605	0.405583	NA	0.514	NA	2.244595
1428	3	41939993	41939993	T	A	intronic	ULK4	NA	NA	NA	intronic	ENSG00000168038	NA	NA	NA	NA	NA	3p22.1	NA	NA	NA	NA	rs1625226	0.8	0.8	0.896	0.698083	0.8012	0.7698	0.7781	0.5552	0.6544	0.84	0.89	0.87	0.6	0.9546	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.715107	NA	NA	NA	NA	NA	0.862	NA	2.2442
1428	1	59158632	59158632	T	C	intronic	MYSM1	NA	NA	NA	intronic	ENSG00000162601	NA	NA	NA	NA	NA	1p32.1	NA	NA	NA	NA	rs12097333	0.59	0.59	0.572	0.581869	0.5865	0.628	0.6369	0.4849	0.6217	0.59	0.62	0.65	0.49	0.5947	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.610543	1.610543	NA	0.574748	0.477994	NA	0.58	NA	2.244052
1428	12	52843666	52843666	G	A	intronic	KRT6B	NA	NA	NA	intronic	ENSG00000185479	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs673602	0.59	0.59	0.607	0.619609	0.6233	0.6845	0.6916	0.6377	0.4734	0.54	0.72	0.63	0.5	0.5913	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.257354	1.257354	NA	0.542917	0.519065	NA	0.609	NA	2.242483
1428	11	6638506	6638506	A	T	intronic	TPP1	NA	NA	NA	intronic	ENSG00000166340	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs1800738	0.48	0.48	0.428	0.462061	0.6074	0.5575	0.5562	0.1422	0.5798	0.6	0.54	0.56	0.15	0.5494	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.626209	NA	NA	0.601257	0.201045	NA	0.377	NA	2.241943
1428	13	52511362	52511362	C	G	intronic	ATP7B	NA	NA	NA	intronic	ENSG00000123191	NA	NA	NA	NA	NA	13q14.3	NA	NA	NA	NA	rs9535795	0.52	0.52	0.52	0.531749	0.6034	0.4008	0.5836	0.5439	0.5399	0.59	0.4	0.6	0.51	0.5607	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.268251	NA	NA	0.595042	0.524974	NA	0.486	NA	2.240858
1428	2	228118403	228118403	T	G	ncRNA_intronic	LOC654841	NA	NA	NA	ncRNA_intronic	ENSG00000236432	NA	NA	NA	NA	NA	2q36.3	NA	NA	NA	NA	rs12621551	0.81	0.81	0.802	0.786941	0.8012	0.9187	0.8012	0.6248	0.8456	0.81	0.91	0.78	0.69	0.8128	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.198081	NA	NA	0.81208	0.689975	NA	0.717	NA	2.2405866
1428	9	139402663	139402663	T	C	intronic	NOTCH1	NA	NA	NA	intronic	ENSG00000148400	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs3124597	0.76	0.76	0.734	0.767173	0.5795	0.9137	0.6412	0.9576	0.6411	0.57	0.88	0.67	0.96	0.6351	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.092027	NA	NA	0.544849	0.887422	NA	0.725	NA	2.240551
1428	1	227935355	227935355	T	C	intronic	SNAP47	NA	NA	NA	intronic	ENSG00000143740	NA	NA	NA	NA	NA	1q42.13	NA	NA	NA	NA	rs2236360	0.73	0.73	0.732	0.746206	0.5567	0.7808	0.7089	0.9531	0.6524	0.56	0.78	0.7	0.96	0.6345	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.861681	NA	NA	0.56907	0.894916	NA	0.659	NA	2.23973
1428	10	119027123	119027123	C	A	intronic	SLC18A2	NA	NA	NA	intronic	ENSG00000165646	NA	NA	NA	NA	NA	10q25.3	NA	NA	NA	NA	rs363228	0.75	0.75	0.746	0.721845	0.8797	0.5962	0.7781	0.6536	0.7413	0.88	0.62	0.79	0.66	NA	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.391382	NA	NA	0.880578	0.692919	NA	0.826	NA	2.239722
1428	21	44449095	44449095	G	A	intronic	PKNOX1	NA	NA	NA	intronic	ENSG00000160199	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs234729	0.85	0.85	0.839	0.851438	0.8757	0.7431	0.7867	0.9448	0.8579	0.89	0.74	0.81	0.94	0.8846	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.346497	NA	NA	NA	NA	NA	0.877	NA	2.2397
1428	5	176002926	176002926	C	A	intronic	CDHR2	NA	NA	NA	intronic	ENSG00000074276	NA	NA	NA	NA	NA	5q35.2	NA	Name=TR4,AP-2gamma	NA	NA	rs3762968	0.8	0.8	0.754	0.769768	0.9274	0.8403	0.8761	0.4924	0.8344	0.93	0.84	0.9	0.47	0.8906	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.973788	NA	NA	0.943256	0.564911	NA	0.638	NA	2.238744
1428	1	59139223	59139223	C	G	intronic	MYSM1	NA	NA	NA	intronic	ENSG00000162601	NA	NA	NA	NA	NA	1p32.1	NA	NA	NA	NA	rs2064370	0.58	0.58	0.558	0.582069	0.5865	0.628	0.6383	0.4841	0.6227	0.58	0.62	0.64	0.48	0.5978	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.597895	NA	NA	0.577496	0.48955	ID=COSN163111;OCCURENCE=1(breast),1(lung)	0.58	NA	2.238204
1428	7	75185985	75185985	A	G	intronic	HIP1	NA	NA	NA	intronic	ENSG00000127946	NA	NA	NA	NA	NA	7q11.23	NA	NA	NA	NA	rs794368	0.53	0.53	0.517	0.541134	0.6064	0.4504	0.5014	0.531	0.6094	0.6	0.42	0.52	0.56	0.5668	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.567866	NA	NA	0.589419	0.526328	NA	0.652	NA	2.237381
1428	17	2598639	2598639	C	G	intronic	CLUH	NA	NA	NA	intronic	ENSG00000132361	NA	NA	NA	NA	NA	17p13.3	NA	NA	NA	NA	rs1003399	0.49	0.49	0.454	0.469848	0.5706	0.5327	0.6268	0.2065	0.546	0.58	0.54	0.62	0.21	0.5671	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.036476	NA	NA	0.625304	0.281009	NA	0.442	NA	2.236996
1428	2	118704503	118704503	A	G	intronic	CCDC93	NA	NA	NA	intronic	ENSG00000125633	NA	NA	NA	NA	NA	2q14.1	NA	NA	NA	NA	rs2303329	0.62	0.62	0.587	0.594249	0.5716	0.8591	0.7147	0.3094	0.6442	0.58	0.88	0.67	0.33	0.6176	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.745409	NA	NA	0.57407	0.396278	NA	0.478	NA	2.23673
1428	12	118520240	118520240	G	A	intronic	VSIG10	NA	NA	NA	intronic	ENSG00000176834	NA	NA	NA	NA	NA	12q24.23	NA	NA	NA	NA	rs6490164	0.72	0.72	0.714	0.717851	0.5696	0.7004	0.7435	0.9644	0.5368	0.57	0.74	0.69	0.95	0.6227	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.905817	2.905817	NA	0.571028	0.905026	NA	0.645	NA	2.236672
1428	17	78969590	78969590	T	C	intronic	CHMP6	NA	NA	NA	intronic	ENSG00000176108	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs66738175	0.61	0.61	0.592	0.601438	0.5905	0.5079	0.6643	0.7065	0.5225	0.59	0.52	0.63	0.71	0.5888	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.780651	NA	NA	0.584186	0.681199	NA	0.71	NA	2.236514
1428	14	22038915	22038915	A	G	upstream	OR10G3	NA	NA	NA	upstream	ENSG00000169208	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs4982462	0.51	0.51	0.501	0.512181	0.4652	0.6667	0.6412	0.3442	0.5368	0.47	0.65	0.6	0.34	0.5058	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.15464	NA	NA	0.459713	0.356068	NA	0.507	NA	2.2359536
1428	20	33509275	33509275	G	A	intronic	ACSS2	NA	NA	NA	intronic	ENSG00000131069	NA	NA	NA	NA	NA	20q11.22	NA	NA	NA	NA	rs3818273	0.47	0.47	0.477	0.510982	0.5706	0.4345	0.3501	0.4281	0.7546	0.59	0.42	0.41	0.4	0.5766	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.626836	2.626836	NA	0.617093	0.468452	NA	0.594	NA	2.235707
1429	1	6681744	6681744	C	T	UTR3	PHF13	NM_153812:c.*47C>T	NA	NA	UTR3	ENSG00000116273	ENST00000377648:c.*47C>T	NA	NA	NA	NA	1p36.31	NA	NA	NA	NA	rs3747994	0.66	0.66	0.679	0.694688	0.7018	0.5784	0.6167	0.736	0.8067	0.68	0.6	0.64	0.71	0.6858	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.708247	NA	NA	0.711592	0.715842	NA	0.768	NA	2.2341414
1429	17	42501692	42501692	C	A	intronic	GPATCH8	NA	NA	NA	intronic	ENSG00000186566	NA	NA	NA	NA	NA	17q21.31	NA	NA	NA	NA	rs1869495	0.5	0.5	0.489	0.445487	0.6014	0.497	0.5807	0.233	0.4233	0.59	0.52	0.62	0.26	0.5427	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.97587	NA	NA	0.62186	0.283477	NA	0.362	NA	2.23404
1429	15	33765761	33765761	A	G	intronic	RYR3	NA	NA	NA	intronic	ENSG00000198838	NA	NA	NA	NA	NA	15q14	NA	NA	NA	NA	rs2245508	0.64	0.64	0.645	0.648562	0.5954	0.5119	0.6095	0.8986	0.5337	0.59	0.53	0.61	0.87	0.5828	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.05005	NA	NA	0.58827	0.853478	NA	0.688	NA	2.23353
1429	19	49632079	49632079	C	A	intronic	PPFIA3	NA	NA	NA	intronic	ENSG00000177380	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs4802565	0.57	0.57	0.593	0.597843	0.5765	0.253	0.572	0.9168	0.5624	0.58	0.25	0.63	0.9	0.5869	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.36345	3.36345	NA	0.603444	0.849704	NA	0.616	NA	2.233156
1429	18	29617255	29617255	T	G	intronic	RNF125	NA	NA	NA	ncRNA_intronic	ENSG00000263917	NA	NA	NA	NA	NA	18q12.1	NA	NA	NA	NA	rs9947278	0.65	0.65	0.657	0.674321	0.7068	0.4216	0.647	0.8525	0.68	0.7	0.42	0.64	0.85	0.6839	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.13733	NA	NA	0.709767	0.830912	NA	0.797	NA	2.2328663
1429	1	16358685	16358685	C	G	intronic	CLCNKA	NA	NA	NA	intronic	ENSG00000186510	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs6669935	0.7	0.7	0.713	0.686701	0.5915	0.9683	0.549	0.6566	0.6329	0.59	0.97	0.56	0.65	0.6088	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.053407	2.053407	NA	0.56714	0.643733	NA	0.623	NA	2.23256
1429	15	88423463	88423463	C	T	intronic	NTRK3	NA	NA	NA	intronic	ENSG00000140538	NA	NA	NA	NA	NA	15q25.3	NA	NA	NA	NA	rs1560975	0.5	0.5	0.487	0.446885	0.6173	0.6081	0.5648	0.1528	0.4192	0.62	0.61	0.54	0.16	0.5421	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.297568	NA	NA	0.608048	0.22308	NA	0.558	NA	2.232552
1429	19	49519058	49519058	T	C	intronic	RUVBL2	NA	NA	NA	intronic	ENSG00000183207	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs749776	0.57	0.57	0.551	0.578275	0.5994	0.3383	0.6254	0.7405	0.5511	0.61	0.34	0.61	0.74	0.5883	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.888199	1.888199	NA	0.579981	0.721966	ID=COSN165864;OCCURENCE=1(NS)	0.688	NA	2.232319
1429	19	36113658	36113658	A	G	intronic	HAUS5	NA	NA	NA	intronic	ENSG00000249115	NA	NA	NA	NA	NA	19q13.12	NA	NA	NA	NA	rs2285414	0.7	0.7	0.688	0.729233	0.5646	0.8095	0.7795	0.8306	0.6431	0.57	0.77	0.73	0.82	0.6367	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.575493	NA	NA	0.56689	0.784569	NA	0.754	NA	2.23181
1429	2	29419591	29419591	G	T	intronic	ALK	NA	NA	NA	intronic	ENSG00000171094	NA	NA	NA	NA	NA	2p23.2	NA	NA	NA	NA	rs1670284	0.43	0.43	0.416	0.420727	0.6024	0.2698	0.4265	0.3495	0.4816	0.59	0.27	0.47	0.35	0.5279	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.714935	NA	NA	0.638953	0.367453	NA	0.413	NA	2.230747
1429	13	113739518	113739518	G	A	intronic	MCF2L	NA	NA	NA	intronic	ENSG00000126217	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs546818	0.47	0.47	0.462	0.468251	0.6054	0.2579	0.4942	0.441	0.5624	0.62	0.29	0.51	0.43	0.5573	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.187049	NA	NA	0.608539	0.45892	NA	0.471	NA	2.228761
1429	3	126208249	126208249	A	C	intronic	UROC1	NA	NA	NA	intronic	ENSG00000159650	NA	NA	NA	NA	NA	3q21.3	NA	NA	NA	NA	rs777479	0.5	0.5	0.471	0.491613	0.6093	0.5873	0.4914	0.208	0.6554	0.61	0.6	0.52	0.22	0.5576	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.176974	NA	NA	0.605349	0.268271	NA	0.493	NA	2.227751
1429	1	117142531	117142531	G	A	intronic	IGSF3	NA	NA	NA	intronic	ENSG00000143061	NA	NA	NA	NA	NA	1p13.1	NA	NA	NA	NA	rs631461	0.68	0.68	0.66	0.691094	0.6133	0.5635	0.6772	0.8442	0.7055	0.63	0.6	0.68	0.87	0.6012	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.64899	NA	NA	0.55792	0.753521	NA	0.406	NA	2.22758
1429	9	127733926	127733926	C	T	intronic	SCAI	NA	NA	NA	intronic	ENSG00000173611	NA	NA	NA	NA	NA	9q33.3	NA	NA	NA	NA	rs2289631	0.64	0.64	0.632	0.64996	0.5736	0.6389	0.6585	0.6702	0.7065	0.6	0.63	0.66	0.69	0.6276	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.100058	2.100058	NA	0.57176	0.667562	NA	0.63	NA	2.22704
1429	1	210856585	210856585	G	T	UTR3	KCNH1	NM_172362:c.*38C>A,NM_002238:c.*38C>A	NA	NA	UTR3	ENSG00000143473	ENST00000271751:c.*38C>A,ENST00000367007:c.*38C>A	NA	NA	NA	NA	1q32.2	NA	NA	NA	NA	rs3135473	0.71	0.71	0.724	0.756789	0.6909	0.6617	0.6844	0.8744	0.8149	0.69	0.65	0.67	0.85	0.709	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.184088	NA	NA	0.706848	0.858671	NA	0.652	NA	2.2265854
1429	20	31688330	31688330	C	T	intronic	BPIFB4	NA	NA	NA	intronic	ENSG00000186191	NA	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs11696310	0.48	0.48	0.501	0.477037	0.6044	0.247	0.5202	0.5348	0.4744	0.6	0.24	0.54	0.54	0.555	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.288847	NA	NA	0.61407	0.570359	NA	0.5	NA	2.22653
1429	22	18910307	18910307	G	A	intronic	PRODH	NA	NA	NA	intronic	ENSG00000100033	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs2008903	0.75	0.75	0.745	0.78095	0.5567	0.9702	0.6729	0.916	0.7106	0.54	0.96	0.65	0.91	0.64	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.264691	NA	NA	0.577147	0.863595	NA	0.739	NA	2.226153
1429	1	211452678	211452678	G	A	intronic	RCOR3	NA	NA	NA	intronic	ENSG00000117625	NA	NA	NA	NA	NA	1q32.2	NA	NA	NA	NA	rs3767377	0.51	0.51	0.464	0.456669	0.5994	0.62	0.5764	0.1475	0.4744	0.6	0.63	0.6	0.16	0.5673	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.259733	NA	NA	0.607209	0.211076	NA	0.428	NA	2.226091
1429	22	18910301	18910301	A	G	intronic	PRODH	NA	NA	NA	intronic	ENSG00000100033	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs2008904	0.75	0.75	0.745	0.780751	0.5567	0.9692	0.6729	0.916	0.7106	0.54	0.96	0.65	0.91	0.6401	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.638779	NA	NA	0.577478	0.864049	NA	0.739	NA	2.225722
1429	4	66509194	66509194	T	C	intronic	EPHA5	NA	NA	NA	intronic	ENSG00000145242	NA	NA	NA	NA	NA	4q13.1	NA	NA	NA	NA	rs4343775	0.59	0.59	0.567	0.576278	0.5785	0.5972	0.6556	0.5522	0.5286	0.58	0.55	0.66	0.58	0.5937	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.159494	NA	NA	0.602214	0.572308	NA	0.551	NA	2.225586
1430	19	4037525	4037525	C	T	intronic	PIAS4	NA	NA	NA	intronic	ENSG00000105229	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs2305106	0.5	0.5	0.417	0.428514	0.5974	0.7034	0.549	0.0507	0.3967	0.6	0.72	0.54	0.06	0.5596	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.952804	NA	NA	0.618476	0.13775	NA	0.203	NA	2.224524
1430	1	211447625	211447625	G	A	intronic	RCOR3	NA	NA	NA	intronic	ENSG00000117625	NA	NA	NA	NA	NA	1q32.2	NA	NA	NA	NA	rs11580084	0.51	0.51	0.471	0.45607	0.5994	0.6171	0.5764	0.1475	0.4744	0.6	0.63	0.6	0.16	0.569	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.567885	NA	NA	0.607442	0.210168	NA	0.435	NA	2.224158
1430	17	8390733	8390733	A	G	intronic	MYH10	NA	NA	NA	intronic	ENSG00000133026,ENSG00000166579	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs3826463	0.53	0.53	0.501	0.496605	0.6272	0.5724	0.5418	0.2844	0.5389	0.62	0.58	0.6	0.29	0.5619	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.610113	NA	NA	0.589884	0.328189	NA	0.507	NA	2.221016
1430	22	18910756	18910756	C	G	intronic	PRODH	NA	NA	NA	intronic	ENSG00000100033	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs2008878	0.76	0.76	0.777	0.790136	0.5567	0.9702	0.6787	0.947	0.7117	0.54	0.97	0.66	0.94	0.6504	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.381049	NA	NA	0.573224	0.910405	NA	0.732	NA	2.219676
1430	16	4039141	4039141	A	G	intronic	ADCY9	NA	NA	NA	intronic	ENSG00000162104	NA	NA	NA	NA	NA	16p13.3	NA	NA	Name=2	NA	rs2072341	0.87	0.87	0.865	0.873802	0.9235	0.7986	0.938	0.8351	0.907	0.92	0.8	0.91	0.84	0.9203	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.342053	NA	NA	0.93686	0.85594	NA	0.899	NA	2.21934
1430	3	111785208	111785208	G	A	intronic	TMPRSS7	NA	NA	NA	intronic	ENSG00000176040	NA	NA	NA	NA	NA	3q13.2	NA	NA	NA	NA	rs11715561	0.53	0.53	0.505	0.485224	0.6193	0.5268	0.585	0.2958	0.4898	0.63	0.57	0.55	0.29	0.5653	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.249307	NA	NA	0.596205	0.320275	NA	0.464	NA	2.219195
1430	2	219501133	219501133	G	A	intronic	PLCD4	NA	NA	NA	intronic	ENSG00000115556	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs2278530	0.6	0.6	0.575	0.608027	0.5954	0.8214	0.6095	0.4047	0.6748	0.6	0.79	0.61	0.36	0.6018	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.824233	NA	0.77	0.583772	0.500486	NA	0.486	NA	2.219028
1430	17	78970779	78970779	G	C	intronic	CHMP6	NA	NA	NA	intronic	ENSG00000176108	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs12951796	0.65	0.65	0.662	0.651158	0.5915	0.501	0.6801	0.8911	0.5225	0.59	0.51	0.65	0.92	0.605	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.827126	NA	NA	0.584767	0.862006	NA	0.775	NA	2.218733
1430	14	58056257	58056257	G	T	intronic	SLC35F4	NA	NA	NA	intronic	ENSG00000151812	NA	NA	NA	NA	NA	14q22.3	NA	NA	NA	NA	rs1190313	0.66	0.66	0.636	0.663938	0.5954	0.8819	0.5086	0.6362	0.6575	0.59	0.88	0.52	0.61	0.6141	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.377937	3.377937	NA	0.572225	0.63775	NA	0.674	NA	2.218275
1430	12	66814466	66814466	C	G	intronic	GRIP1	NA	NA	NA	intronic	ENSG00000155974	NA	NA	NA	NA	NA	12q14.3	NA	NA	NA	NA	rs7397861	0.4	0.4	0.371	0.390375	0.6123	0.3244	0.513	0.0832	0.5583	0.61	0.33	0.49	0.1	0.5532	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.213186	NA	NA	0.616288	0.162045	NA	0.442	NA	2.218212
1430	13	31903834	31903834	G	T	UTR3	B3GALTL	NM_194318:c.*29G>T	NA	NA	UTR3	ENSG00000187676	ENST00000343307:c.*29G>T	NA	NA	NA	NA	13q12.3	NA	NA	NA	NA	rs1060709	0.52	0.52	0.494	0.487021	0.7306	0.3919	0.6182	0.2345	0.5828	0.73	0.4	0.65	0.22	0.6399	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.160398	NA	NA	0.745116	0.294144	NA	0.413	NA	2.2177174
1430	1	11128654	11128654	G	A	intronic	EXOSC10	NA	NA	NA	ncRNA_exonic	ENSG00000226849	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs2791655	0.64	0.64	0.599	0.590256	0.7227	0.7827	0.7406	0.202	0.6738	0.73	0.81	0.73	0.23	0.6805	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.020395	NA	NA	0.712442	0.281661	NA	0.587	NA	2.2176913
1430	17	78972864	78972864	T	C	intronic	CHMP6	NA	NA	NA	intronic	ENSG00000176108	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs11870458	0.65	0.65	0.665	0.659545	0.5915	0.504	0.6816	0.9206	0.5215	0.59	0.51	0.65	0.92	0.6058	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.58317	NA	NA	0.585233	0.863822	NA	0.775	NA	2.217467
1430	7	100816527	100816527	A	G	intronic	NAT16	NA	NA	NA	intronic	ENSG00000167011	NA	NA	NA	NA	NA	7q22.1	NA	Name=SUZ12,HA-E2F1	NA	NA	rs2009973	0.94	0.94	0.926	0.949681	0.9304	0.9206	0.964	0.9924	0.9315	0.92	0.91	0.96	0.99	0.9289	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.019469	NA	NA	0.923256	0.981381	NA	0.92	NA	2.217444
1430	5	108691738	108691738	A	T	intronic	PJA2	NA	NA	NA	intronic	ENSG00000198961	NA	NA	NA	NA	NA	5q21.3	NA	NA	NA	NA	rs2431253	0.41	0.41	0.408	0.378794	0.5825	0.0575	0.4741	0.3177	0.5153	0.66	0.05	0.52	0.36	0.5557	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.035217	NA	NA	0.644419	0.406222	NA	0.457	NA	2.217381
1430	11	64596916	64596916	C	T	intronic	CDC42BPG	NA	NA	NA	intronic	ENSG00000171219	NA	NA	NA	NA	NA	11q13.1	NA	NA	NA	NA	rs10897529	0.38	0.38	0.381	0.357428	0.6133	0.0536	0.3818	0.3185	0.4427	0.62	0.06	0.44	0.33	0.5114	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.141092	NA	NA	0.657962	0.375626	NA	0.507	NA	2.217338
1430	12	125438414	125438414	A	G	intronic	DHX37	NA	NA	NA	intronic	ENSG00000150990	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs12367953	0.63	0.63	0.552	0.65655	0.5994	0.8472	0.6571	0.4463	0.8027	0.59	0.84	0.64	0.43	0.6421	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.300853	NA	NA	0.541186	0.391464	NA	0.341	NA	2.217314
1430	2	74129474	74129474	T	C	intronic	ACTG2	NA	NA	NA	intronic	ENSG00000163017	NA	NA	NA	NA	NA	2p13.1	NA	NA	NA	NA	rs1726025	0.57	0.57	0.522	0.562899	0.6133	0.5188	0.7147	0.4947	0.5409	0.63	0.5	0.67	0.51	0.5897	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.994527	NA	NA	0.579767	0.512029	NA	0.471	NA	2.217233
1430	2	160889673	160889673	G	A	intronic	PLA2R1	NA	NA	NA	intronic	ENSG00000153246	NA	NA	NA	NA	NA	2q24.2	NA	NA	NA	NA	rs2203053	0.51	0.51	0.495	0.448682	0.6133	0.5685	0.4135	0.2935	0.3906	0.61	0.55	0.46	0.34	0.5439	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.360957	2.360957	NA	0.625698	0.352928	NA	0.478	NA	2.217102
1430	6	34026938	34026938	C	T	intronic	GRM4	NA	NA	NA	intronic	ENSG00000124493	NA	NA	NA	Score=383;Name=lod=48	NA	6p21.31	NA	NA	NA	NA	rs2451359	0.96	0.96	0.973	0.967252	0.9185	0.994	0.9712	0.9985	0.9448	0.92	1	0.95	1	0.9386	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.02359	NA	NA	0.926111	0.987063	NA	0.986	NA	2.216789
1430	1	175097331	175097331	G	A	intronic	TNN	NA	NA	NA	intronic	ENSG00000120332	NA	NA	NA	NA	NA	1q25.1	NA	NA	NA	NA	rs10912891	0.47	0.47	0.46	0.407548	0.6223	0.3581	0.428	0.3086	0.3569	0.64	0.37	0.44	0.33	0.5397	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.294301	NA	NA	0.621512	0.335225	NA	0.384	NA	2.216488
1430	12	10015082	10015082	G	A	intronic	CLEC2B	NA	NA	NA	intronic	ENSG00000110852	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs253147	0.6	0.6	0.621	0.614018	0.6113	0.4871	0.4957	0.8185	0.5552	0.61	0.45	0.52	0.8	0.5949	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.191707	NA	NA	0.578012	0.788629	NA	0.674	NA	2.215788
1430	14	90729984	90729984	C	T	intronic	PSMC1	NA	NA	NA	intronic	ENSG00000100764	NA	NA	NA	NA	NA	14q32.11	NA	NA	NA	NA	rs8015510	0.53	0.53	0.487	0.52516	0.6014	0.4812	0.6398	0.3918	0.591	0.59	0.48	0.61	0.42	0.5882	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.610657	NA	NA	0.594789	0.402955	NA	0.5	NA	2.215611
1430	8	121293331	121293331	G	A	intronic	COL14A1	NA	NA	NA	intronic	ENSG00000187955	NA	NA	NA	NA	NA	8q24.12	NA	NA	NA	NA	rs1563388	0.64	0.64	0.667	0.653954	0.5785	0.5794	0.598	0.8797	0.5429	0.57	0.59	0.62	0.85	0.6021	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.752582	NA	NA	0.603953	0.838783	NA	0.58	NA	2.215447
1431	22	44364594	44364594	C	T	intronic	SAMM50	NA	NA	NA	intronic	ENSG00000100347	NA	NA	NA	NA	NA	22q13.31	NA	NA	NA	NA	rs5764434	0.72	0.72	0.717	0.72504	0.5964	0.8155	0.6239	0.7912	0.7464	0.61	0.84	0.6	0.82	0.6259	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.780535	NA	NA	0.563256	0.755334	NA	0.725	NA	2.214444
1431	8	22442287	22442287	A	G	intronic	PDLIM2	NA	NA	NA	intronic	ENSG00000120913	NA	NA	NA	NA	NA	8p21.3	NA	NA	NA	NA	rs4872003	0.56	0.56	0.542	0.577077	0.6044	0.4603	0.6513	0.5809	0.6115	0.6	0.47	0.61	0.58	0.5941	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.103065	NA	NA	0.588837	0.587608	NA	0.558	NA	2.212663
1431	1	150997940	150997940	T	C	intronic	PRUNE	NA	NA	NA	intronic	ENSG00000143363	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs3738478	0.53	0.53	0.555	0.510583	0.6302	0.4276	0.487	0.4818	0.5286	0.63	0.45	0.54	0.47	0.5555	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.857398	NA	NA	0.60186	0.510667	NA	0.609	NA	2.21244
1431	2	75113572	75113572	G	A	intronic	HK2	NA	NA	NA	intronic	ENSG00000159399	NA	NA	NA	NA	NA	2p12	NA	NA	NA	NA	rs2306806	0.51	0.51	0.501	0.485224	0.6213	0.4454	0.4741	0.3169	0.6217	0.62	0.47	0.52	0.37	0.5618	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.213369	NA	NA	0.606163	0.36995	ID=COSN166144;OCCURENCE=1(NS)	0.449	NA	2.210737
1431	17	66447073	66447073	T	C	intronic	WIPI1	NA	NA	NA	ncRNA_intronic	ENSG00000267009	NA	NA	NA	NA	NA	17q24.2	NA	NA	NA	NA	rs2302783	0.65	0.65	0.645	0.657947	0.7217	0.5317	0.6412	0.6505	0.7444	0.74	0.56	0.64	0.65	0.6888	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.38085	NA	NA	0.712791	0.639582	NA	0.703	NA	2.2100423
1431	2	197065964	197065964	C	A	UTR3	HECW2	NM_020760:c.*37G>T	NA	NA	UTR3	ENSG00000138411	ENST00000260983:c.*37G>T,ENST00000409111:c.*37G>T	NA	NA	NA	NA	2q32.3	NA	NA	NA	NA	rs3820908	0.71	0.71	0.673	0.715655	0.7028	0.8294	0.7666	0.5719	0.7699	0.7	0.84	0.73	0.58	0.7188	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.409127	NA	NA	0.70214	0.576487	NA	0.63	NA	2.2095934
1431	13	111154160	111154160	G	A	intronic	COL4A2	NA	NA	NA	intronic	ENSG00000134871	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs2281968	0.47	0.47	0.467	0.508387	0.6044	0.3839	0.4942	0.4236	0.6626	0.59	0.34	0.5	0.42	0.5717	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.160583	NA	NA	0.6151	0.506893	NA	0.623	NA	2.2088
1431	12	51752897	51752897	G	A	intronic	GALNT6	NA	NA	NA	intronic	ENSG00000139629	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs907347	0.45	0.45	0.447	0.451478	0.6143	0.1815	0.4193	0.5802	0.411	0.6	0.15	0.44	0.57	0.5372	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.732833	NA	NA	0.640349	0.605084	ID=COSN164247;OCCURENCE=1(breast)	0.558	NA	2.208151
1431	3	52867595	52867595	C	A	intronic	MUSTN1,TMEM110-MUSTN1	NA	NA	NA	intronic	ENSG00000243696,ENSG00000248592	NA	NA	NA	NA	NA	3p21.1	NA	NA	NA	NA	rs60332615	0.5	0.5	0.49	0.490016	0.5944	0.628	0.4409	0.2912	0.544	0.59	0.57	0.43	0.34	0.5801	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.745324	NA	NA	0.61738	0.363182	NA	0.507	NA	2.20812
1431	2	170492584	170492584	T	C	intronic	PPIG	NA	NA	NA	intronic	ENSG00000138398	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	rs2290008	0.64	0.64	0.646	0.653954	0.5706	0.6091	0.5173	0.8169	0.6626	0.57	0.64	0.58	0.79	0.6223	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.976419	NA	NA	0.601512	0.775557	ID=COSN166328;OCCURENCE=1(breast)	0.681	NA	2.205588
1431	21	47616080	47616080	G	A	intronic	LSS	NA	NA	NA	intronic	ENSG00000160285	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs2839140	0.59	0.59	0.607	0.58127	0.6123	0.6825	0.4957	0.5401	0.5613	0.61	0.72	0.49	0.49	0.5847	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.413271	NA	NA	0.597442	0.537676	NA	0.681	NA	2.205558
1432	12	68719216	68719216	G	A	UTR3	MDM1	NM_020128:c.*1050C>T,NM_001205029:c.*1998C>T	NA	NA	UTR3	ENSG00000111554	ENST00000393543:c.*1998C>T,ENST00000430606:c.*1050C>T	NA	NA	NA	NA	12q15	NA	NA	NA	NA	rs2870812	0.68	0.68	0.693	0.678315	0.7177	0.4484	0.7378	0.823	0.637	0.71	0.47	0.75	0.84	0.6975	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.283012	NA	NA	0.713721	0.803223	NA	0.659	NA	2.2044124
1432	17	67099129	67099129	A	G	intronic	ABCA6	NA	NA	NA	intronic	ENSG00000154262	NA	NA	NA	NA	NA	17q24.2	NA	NA	NA	NA	rs2364315	0.41	0.41	0.381	0.430911	0.6153	0.3185	0.5346	0.1974	0.5992	0.61	0.26	0.49	0.19	0.5602	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.749354	NA	NA	0.621584	0.286105	NA	0.391	NA	2.202916
1432	5	147510776	147510776	T	C	intronic	SPINK5	NA	NA	NA	intronic	ENSG00000133710	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs6895434	0.51	0.51	0.483	0.509185	0.5924	0.4821	0.6398	0.3903	0.5194	0.56	0.46	0.59	0.43	0.5888	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.008628	NA	NA	0.61593	0.434417	NA	0.478	NA	2.20287
1432	1	175355128	175355128	C	G	intronic	TNR	NA	NA	NA	intronic	ENSG00000116147	NA	NA	NA	NA	NA	1q25.1	NA	NA	NA	NA	rs859436	0.64	0.64	0.641	0.652157	0.5726	0.7252	0.7363	0.6104	0.6554	0.56	0.7	0.69	0.64	0.6291	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.685807	NA	NA	0.595581	0.639355	NA	0.696	NA	2.202719
1432	18	66513662	66513662	T	C	intronic	CCDC102B	NA	NA	NA	intronic	ENSG00000150636	NA	NA	NA	NA	NA	18q22.1	NA	NA	NA	NA	rs1977942	0.55	0.55	0.571	0.55611	0.5915	0.3562	0.5259	0.6657	0.5992	0.6	0.37	0.54	0.68	0.5941	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.677663	NA	NA	0.61186	0.656449	NA	0.529	NA	2.20254
1432	8	121309862	121309862	A	T	intronic	COL14A1	NA	NA	NA	intronic	ENSG00000187955	NA	NA	NA	NA	NA	8q24.12	NA	NA	NA	NA	rs2219241	0.66	0.66	0.661	0.670527	0.5795	0.5784	0.6095	0.9365	0.5429	0.57	0.59	0.63	0.92	0.6146	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.281968	NA	NA	0.603396	0.887778	NA	0.449	NA	2.202504
1432	6	160234625	160234625	G	C	intronic	PNLDC1	NA	NA	NA	intronic	ENSG00000146453	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs13220869	0.58	0.58	0.553	0.595447	0.5885	0.5367	0.6801	0.5832	0.6196	0.58	0.54	0.65	0.57	0.6033	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.576325	NA	NA	0.606163	0.56355	ID=COSM150212;OCCURENCE=1(stomach)	0.732	NA	2.202037
1432	22	25714113	25714113	A	G	upstream	IGLL3P	NA	NA	NA	upstream	ENSG00000206066	NA	NA	NA	NA	NA	22q11.23	NA	NA	NA	NA	rs2330574	0.39	0.39	0.344	0.374201	0.5139	0.0734	0.2896	0.5809	0.3211	0.53	0.08	0.34	0.57	0.445	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.731415	NA	NA	0.506163	0.557273	ID=COSM149269;OCCURENCE=1(stomach)	0.507	NA	2.2016036
1432	21	47639492	47639492	C	G	intronic	LSS	NA	NA	NA	intronic	ENSG00000160285	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs2277826	0.56	0.56	0.543	0.51897	0.6302	0.6716	0.4669	0.3139	0.5613	0.63	0.71	0.48	0.31	0.5756	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.089056	NA	NA	0.592791	0.338783	NA	0.659	NA	2.201409
1432	5	73160730	73160730	G	A	intronic	ARHGEF28	NA	NA	NA	intronic	ENSG00000214944	NA	NA	NA	NA	NA	5q13.2	NA	NA	NA	NA	rs1014550	0.67	0.67	0.682	0.703874	0.5815	0.5813	0.6138	0.9652	0.6667	0.58	0.55	0.63	0.95	0.6285	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.147104	NA	NA	0.589	0.914195	NA	0.659	NA	2.201
1432	12	52884557	52884557	T	C	intronic	KRT6A	NA	NA	NA	intronic	ENSG00000205420	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs298120	0.67	0.67	0.659	0.611621	0.6183	0.6875	0.6873	0.6241	0.456	0.61	0.77	0.68	0.63	0.5871	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.485543	NA	NA	0.59407	0.589424	NA	0.746	NA	2.20053
1432	7	140082363	140082363	G	A	UTR5	SLC37A3	NM_207113:c.-37C>T,NM_032295:c.-37C>T	NA	NA	UTR5	ENSG00000157800	ENST00000477571:c.-37C>T,ENST00000326232:c.-37C>T,ENST00000447932:c.-37C>T,ENST00000340308:c.-37C>T,ENST00000429996:c.-37C>T,ENST00000490760:c.-37C>T,ENST00000469193:c.-37C>T,ENST00000462881:c.-37C>T,ENST00000491505:c.-37C>T	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs6968618	0.74	0.74	0.735	0.764577	0.6839	0.8056	0.7954	0.7284	0.8323	0.69	0.82	0.79	0.71	0.7442	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.702433	NA	NA	0.704767	0.740354	NA	0.783	NA	2.2004664
1432	9	94485928	94485928	C	T	UTR3	ROR2	NM_004560:c.*16G>A	NA	NA	UTR3	ENSG00000169071	ENST00000375708:c.*16G>A	NA	NA	NA	NA	9q22.31	NA	NA	NA	NA	rs2230578	0.79	0.79	0.772	0.757388	0.7078	0.9137	0.7882	0.7799	0.5951	0.72	0.93	0.76	0.78	0.7314	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.123821	NA	NA	0.693695	0.77054	NA	0.761	NA	2.2004384
1432	4	44699506	44699506	C	T	intronic	GUF1	NA	NA	NA	intronic	ENSG00000151806	NA	NA	NA	NA	NA	4p12	NA	NA	NA	NA	rs6821295	0.47	0.47	0.446	0.440096	0.6014	0.4018	0.5202	0.289	0.4611	0.62	0.4	0.53	0.29	0.5625	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.327068	NA	NA	0.635908	0.347115	ID=COSN167190;OCCURENCE=1(large_intestine)	0.601	NA	2.200192
1432	4	44699484	44699484	T	G	intronic	GUF1	NA	NA	NA	intronic	ENSG00000151806	NA	NA	NA	NA	NA	4p12	NA	NA	NA	NA	rs6851576	0.47	0.47	0.448	0.440096	0.6014	0.4018	0.5202	0.289	0.4611	0.62	0.4	0.53	0.29	0.5622	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.408467	1.408467	NA	0.636268	0.34673	ID=COSN167189;OCCURENCE=4(large_intestine)	0.601	NA	2.200132
1432	19	33134425	33134425	G	A	intronic	ANKRD27	NA	NA	NA	intronic	ENSG00000105186	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs259229	0.4	0.4	0.37	0.370008	0.6193	0.252	0.4654	0.1573	0.455	0.62	0.27	0.5	0.15	0.5346	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.887942	NA	NA	0.646279	0.229233	NA	0.406	NA	2.199821
1432	6	76022082	76022082	A	G	intronic	FILIP1	NA	NA	NA	intronic	ENSG00000118407	NA	NA	NA	NA	NA	6q14.1	NA	NA	NA	NA	rs9352202	0.55	0.55	0.539	0.580671	0.5984	0.4613	0.5605	0.6006	0.6728	0.6	0.42	0.58	0.59	0.5903	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.969204	NA	NA	0.611512	0.565138	NA	0.674	NA	2.199788
1432	3	53133526	53133526	A	G	intronic	RFT1	NA	NA	NA	intronic	ENSG00000163933	NA	NA	NA	NA	NA	3p21.1	NA	NA	NA	NA	rs2581829	0.56	0.56	0.538	0.521166	0.6183	0.747	0.598	0.2194	0.5419	0.61	0.73	0.6	0.27	0.5903	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.569025	1.569025	NA	0.591744	0.296641	NA	0.529	NA	2.199656
1432	4	3029588	3029588	G	A	intronic	GRK4	NA	NA	NA	intronic	ENSG00000125388	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs2857844	0.51	0.51	0.473	0.518171	0.6044	0.6895	0.4986	0.143	0.774	0.61	0.69	0.53	0.15	0.5898	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.305219	NA	NA	0.606744	0.224013	NA	0.464	NA	2.199056
1432	22	25714110	25714110	T	C	upstream	IGLL3P	NA	NA	NA	upstream	ENSG00000206066	NA	NA	NA	NA	NA	22q11.23	NA	NA	NA	NA	rs2064141	0.39	0.39	0.347	0.374401	0.5139	0.0734	0.2882	0.5825	0.3211	0.53	0.08	0.34	0.57	0.4457	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.932853	NA	NA	0.508258	0.561136	ID=COSM149268;OCCURENCE=1(stomach)	0.507	NA	2.1988086
1432	10	11316987	11316987	G	A	intronic	CELF2	NA	NA	NA	intronic	ENSG00000048740	NA	NA	NA	NA	NA	10p14	NA	NA	NA	NA	rs2244573	0.44	0.44	0.449	0.426318	0.6272	0.2123	0.4222	0.4342	0.4325	0.63	0.22	0.43	0.43	0.532	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.904643	NA	NA	0.642756	0.474636	NA	0.601	NA	2.198044
1432	15	25334086	25334086	T	C	upstream;downstream	SNORD116-22;SNORD116-21	NA	NA	NA	ncRNA_intronic	ENSG00000224078	NA	NA	NA	NA	NA	15q11.2	NA	NA	NA	NA	rs3863396	0.66	0.66	0.663	0.634984	0.659	0.502	0.6801	0.8298	0.4519	0.67	0.49	0.7	0.8	0.6403	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.471721	NA	NA	0.669432	0.80879	NA	0.667	NA	2.1979346
1432	12	52944060	52944060	T	C	intronic	KRT71	NA	NA	NA	intronic	ENSG00000139648	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs10747643	0.62	0.62	0.565	0.571885	0.6024	0.8085	0.7147	0.3132	0.545	0.6	0.81	0.72	0.36	0.599	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.844956	NA	NA	0.600698	0.33182	NA	0.572	NA	2.197902
1432	20	33533736	33533736	A	C	intronic	GSS	NA	NA	NA	intronic	ENSG00000100983	NA	NA	NA	NA	NA	20q11.22	NA	NA	NA	NA	rs734111	0.6	0.6	0.624	0.664337	0.5686	0.4425	0.4035	0.972	0.7607	0.58	0.43	0.46	0.93	0.6196	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.101652	NA	NA	0.61407	0.883568	NA	0.761	NA	2.19773
1432	10	49392575	49392575	C	G	intronic	FRMPD2	NA	NA	NA	intronic	ENSG00000170324	NA	NA	NA	NA	NA	10q11.22	NA	NA	NA	NA	rs931743	0.58	0.58	0.6	0.533746	0.6282	0.4623	0.4784	0.6475	0.3957	0.63	0.45	0.55	0.66	0.5694	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.835602	NA	NA	0.604884	0.636632	NA	0.659	NA	2.197516
1432	1	160803802	160803802	A	G	intronic	CD244	NA	NA	NA	intronic	ENSG00000122223	NA	NA	NA	NA	NA	1q23.3	NA	NA	NA	NA	rs11265493	0.51	0.51	0.479	0.503195	0.6044	0.4583	0.598	0.3449	0.592	0.61	0.47	0.57	0.37	0.5865	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.324174	NA	NA	0.611744	0.374489	NA	0.572	NA	2.197356
1432	9	135601354	135601354	T	C	intronic	AK8	NA	NA	NA	intronic	ENSG00000165695	NA	NA	NA	NA	NA	9q34.13	NA	NA	NA	NA	rs396819	0.65	0.65	0.617	0.653954	0.6133	0.506	0.7507	0.7829	0.6053	0.61	0.55	0.72	0.79	0.6226	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.163072	NA	NA	0.568488	0.751475	NA	0.652	NA	2.195612
1432	11	22391534	22391534	G	A	intronic	SLC17A6	NA	NA	NA	intronic	ENSG00000091664	NA	NA	NA	NA	NA	11p14.3	NA	NA	NA	NA	rs2665677	0.62	0.62	0.582	0.61901	0.5885	0.5526	0.6816	0.6785	0.5941	0.6	0.56	0.68	0.66	0.6077	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.054604	NA	NA	0.608584	0.633015	NA	0.486	NA	2.195216
1433	9	130221388	130221388	T	C	intronic	LRSAM1	NA	NA	NA	intronic	ENSG00000148356	NA	NA	NA	NA	NA	9q33.3	NA	NA	NA	NA	rs2243767	0.57	0.57	0.544	0.557109	0.6322	0.4067	0.6499	0.6082	0.5	0.64	0.41	0.61	0.61	0.5872	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.344521	NA	NA	0.586163	0.640717	NA	0.464	NA	2.194437
1433	12	119937983	119937983	A	C	intronic	CCDC60	NA	NA	NA	ncRNA_intronic	ENSG00000248636	NA	NA	NA	NA	NA	12q24.23	NA	NA	NA	NA	rs482802	0.81	0.81	0.825	0.824481	0.7097	0.8651	0.7882	0.9289	0.7853	0.7	0.88	0.78	0.93	0.7497	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.157018	NA	NA	0.679651	0.888334	NA	0.826	NA	2.1942823
1433	12	66814487	66814487	C	A	intronic	GRIP1	NA	NA	NA	intronic	ENSG00000155974	NA	NA	NA	NA	NA	12q14.3	NA	NA	NA	NA	rs7397862	0.43	0.43	0.398	0.422324	0.6123	0.3244	0.5259	0.1974	0.5583	0.61	0.33	0.51	0.22	0.5616	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.119762	NA	NA	0.632004	0.276059	NA	0.464	NA	2.194096
1433	11	102584607	102584607	T	C	intronic	MMP8	NA	NA	NA	intronic	ENSG00000118113	NA	NA	NA	NA	NA	11q22.2	NA	NA	NA	NA	rs2509013	0.64	0.64	0.629	0.640974	0.6083	0.6538	0.598	0.6959	0.6176	0.58	0.66	0.6	0.72	0.6138	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.819109	NA	NA	0.584322	0.685202	NA	0.696	NA	2.193578
1433	10	27368126	27368126	A	C	intronic	ANKRD26	NA	NA	NA	intronic	ENSG00000107890	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs3737055	0.43	0.43	0.381	0.398363	0.5994	0.4415	0.4971	0.1316	0.4376	0.59	0.39	0.53	0.15	0.5637	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.905494	NA	NA	0.643455	0.228031	NA	0.399	NA	2.193445
1433	6	86199329	86199329	G	C	intronic	NT5E	NA	NA	NA	intronic	ENSG00000135318	NA	NA	NA	NA	NA	6q14.3	NA	NA	NA	NA	rs9450284	0.57	0.57	0.522	0.578874	0.6133	0.5456	0.7608	0.3956	0.6963	0.61	0.55	0.77	0.39	0.6116	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.149399	NA	NA	0.582791	0.410576	NA	0.674	NA	2.192309
1433	5	140955777	140955777	C	T	intronic	DIAPH1	NA	NA	NA	intronic	ENSG00000131504	NA	NA	NA	NA	NA	5q31.3	NA	NA	NA	NA	rs2302103	0.6	0.6	0.594	0.640974	0.5755	0.3452	0.6916	0.885	0.6472	0.6	0.35	0.69	0.85	0.626	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.199452	NA	NA	0.606404	0.845968	NA	0.652	NA	2.192096
1433	12	56093817	56093817	T	G	intronic	ITGA7	NA	NA	NA	intronic	ENSG00000135424	NA	NA	NA	NA	NA	12q13.2	NA	NA	NA	NA	rs11171660	0.77	0.77	0.765	0.809105	0.5646	0.9375	0.7262	0.9546	0.7904	0.57	0.93	0.69	0.95	0.6811	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.544687	NA	NA	0.562558	0.896051	NA	0.783	NA	2.191742
1433	14	30047580	30047580	C	T	ncRNA_intronic	MIR548AI	NA	NA	NA	intronic	ENSG00000184304	NA	NA	NA	NA	NA	14q12	NA	NA	NA	NA	rs2273815	0.65	0.65	0.67	0.626398	0.7097	0.5387	0.6412	0.7156	0.5	0.71	0.53	0.64	0.72	0.6894	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.148502	NA	NA	0.743488	0.70699	NA	0.768	NA	2.1907453
1433	19	33703706	33703706	A	G	intronic	SLC7A10	NA	NA	NA	intronic	ENSG00000130876	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs11673535	0.45	0.45	0.453	0.446286	0.6362	0.1657	0.3746	0.5522	0.4479	0.63	0.14	0.43	0.56	0.5349	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.230728	NA	NA	0.638605	0.535633	NA	0.572	NA	2.190295
1433	7	813650	813650	G	A	intronic	HEATR2	NA	NA	NA	intronic	ENSG00000164818	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs62432869	0.63	0.63	0.613	0.636581	0.6054	0.62	0.6671	0.621	0.6851	0.59	0.63	0.64	0.67	0.6128	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.179866	NA	NA	0.592326	0.601906	NA	0.572	NA	2.189474
1433	8	52412226	52412226	G	T	intronic	PXDNL	NA	NA	NA	intronic	ENSG00000147485	NA	NA	NA	NA	NA	8q11.22	NA	NA	NA	NA	rs755311	0.48	0.48	0.443	0.453275	0.6173	0.621	0.5706	0.0923	0.5164	0.61	0.61	0.56	0.08	0.5731	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.989017	NA	NA	0.62066	0.177061	NA	0.565	NA	2.18894
1433	9	79259850	79259850	A	G	intronic	PRUNE2	NA	NA	NA	intronic	ENSG00000106772	NA	NA	NA	NA	NA	9q21.2	NA	NA	NA	NA	rs512951	0.62	0.62	0.61	0.648163	0.5736	0.622	0.6628	0.6793	0.6994	0.56	0.62	0.66	0.68	0.6372	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.55139	3.55139	NA	0.600503	0.675702	NA	0.696	NA	2.188697
1433	21	10862618	10862618	T	C	intergenic	TEKT4P2,TPTE	dist=894025;dist=44125	NA	NA	upstream	ENSG00000169861	NA	NA	NA	NA	NA	21p11.2	NA	NA	NA	NA	rs3916251	NA	NA	0.473	0.635383	0.6799	0.6141	0.5879	0.6354	0.6452	NA	NA	NA	NA	0.6339	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.389141	NA	NA	NA	NA	NA	0.652	NA	2.1862
1433	10	27382240	27382240	T	C	intronic	ANKRD26	NA	NA	NA	intronic	ENSG00000107890	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs2297147	0.42	0.42	0.383	0.394968	0.5974	0.4444	0.4957	0.1188	0.4376	0.59	0.39	0.52	0.14	0.5732	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.224561	2.224561	NA	0.643484	0.219664	NA	0.399	NA	2.185916
1433	2	136614255	136614255	G	A	intronic	MCM6	NA	NA	NA	intronic	ENSG00000076003	NA	NA	NA	NA	NA	2q21.3	NA	NA	NA	NA	rs309180	0.4	0.4	0.368	0.336262	0.5835	0.375	0.3862	0.121	0.2975	0.59	0.38	0.42	0.12	0.5439	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.647544	NA	NA	0.687326	0.233545	NA	0.457	NA	2.185274
1434	11	76183924	76183924	A	G	intronic	C11orf30	NA	NA	NA	intronic	ENSG00000158636	NA	NA	NA	NA	NA	11q13.5	NA	NA	NA	NA	rs4245443	0.61	0.61	0.573	0.583666	0.6123	0.6944	0.7478	0.3283	0.6687	0.62	0.71	0.72	0.37	0.6142	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.811418	NA	NA	0.589003	0.390682	NA	0.601	NA	2.184497
1434	1	155928242	155928242	C	T	intronic	ARHGEF2	NA	NA	NA	intronic	ENSG00000116584	NA	NA	NA	NA	NA	1q22	NA	NA	NA	NA	rs2886069	0.81	0.81	0.774	0.780351	0.8936	0.9405	0.9092	0.4334	0.8763	0.9	0.93	0.91	0.44	NA	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.021091	NA	NA	0.92269	0.54263	NA	0.696	NA	2.18371
1434	2	203693559	203693559	C	G	intronic	ICA1L	NA	NA	NA	intronic	ENSG00000163596	NA	NA	NA	NA	NA	2q33.2	NA	Name=CTCF	NA	NA	rs4675296	0.87	0.87	0.872	0.869609	0.9503	0.9276	0.8833	0.6997	0.9468	0.95	0.92	0.88	0.68	0.9177	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.20418	NA	NA	0.949767	0.752837	NA	0.87	NA	2.182233
1434	7	814612	814612	G	A	intronic	HEATR2	NA	NA	NA	intronic	ENSG00000164818	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs34943122	0.65	0.65	0.636	0.665136	0.6054	0.619	0.6715	0.73	0.682	0.59	0.63	0.65	0.75	0.62	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.083344	NA	NA	0.59314	0.681344	NA	0.609	NA	2.18146
1434	12	125438549	125438549	A	G	intronic	DHX37	NA	NA	NA	intronic	ENSG00000150990	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs4606565	0.63	0.63	0.566	0.656749	0.6004	0.8462	0.6571	0.4463	0.8037	0.59	0.84	0.64	0.43	0.6393	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.350126	NA	NA	0.579204	0.43123	NA	0.493	NA	2.181096
1434	8	142229145	142229145	A	G	intronic	SLC45A4	NA	NA	NA	intronic	ENSG00000022567	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs3739235	0.7	0.7	0.668	0.709665	0.6014	0.8175	0.585	0.8238	0.6442	0.58	0.81	0.65	0.8	0.6362	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.748262	NA	NA	0.581305	0.813308	NA	0.594	NA	2.181095
1434	10	69651125	69651125	A	G	intronic	SIRT1	NA	NA	NA	intronic	ENSG00000096717	NA	NA	NA	NA	NA	10q21.3	NA	NA	NA	NA	rs7896005	0.37	0.37	0.342	0.324281	0.6501	0.1567	0.4712	0.056	0.4202	0.66	0.17	0.5	0.09	0.5173	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.903515	3.903515	NA	0.651512	0.15025	NA	0.449	NA	2.181088
1434	1	197059928	197059928	A	G	intronic	ASPM	NA	NA	NA	intronic	ENSG00000066279	NA	NA	NA	NA	NA	1q31.3	NA	NA	NA	NA	rs4915316	0.8	0.8	0.763	0.75639	0.9125	0.9831	0.8746	0.2958	0.9008	0.92	0.99	0.89	0.33	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.146004	NA	NA	0.90658	0.378286	NA	0.667	NA	2.18092
1434	4	76416779	76416779	G	A	intronic	RCHY1	NA	NA	NA	intronic	ENSG00000163743	NA	NA	NA	NA	NA	4q21.1	NA	NA	NA	NA	rs2045863	0.67	0.67	0.64	0.634585	0.6083	0.6171	0.5965	0.7761	0.5153	0.62	0.66	0.61	0.79	0.6176	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.028814	NA	NA	0.59327	0.770167	NA	0.609	NA	2.18083
1434	3	108135609	108135609	A	T	intronic	MYH15	NA	NA	NA	intronic	ENSG00000144821	NA	NA	NA	NA	NA	3q13.13	NA	NA	NA	NA	rs116262927	NA	NA	NA	0.911142	0.9066	0.995	0.9395	0.8064	0.9509	NA	NA	NA	NA	0.9137	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.968196	NA	NA	NA	NA	NA	NA	NA	2.1797
1434	17	4712757	4712757	G	A	intronic	PLD2	NA	NA	NA	intronic	ENSG00000129219	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs2286671	0.43	0.43	0.391	0.39357	0.6203	0.1488	0.6326	0.292	0.3804	0.63	0.13	0.64	0.32	0.5529	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.787317	NA	NA	0.647825	0.360645	NA	0.58	NA	2.178975
1434	10	5827074	5827074	G	A	intronic	GDI2	NA	NA	NA	intronic	ENSG00000057608	NA	NA	NA	NA	NA	10p15.1	NA	NA	NA	NA	rs10795547	0.47	0.47	0.437	0.45607	0.6382	0.2371	0.5735	0.4508	0.4182	0.64	0.22	0.54	0.44	0.5604	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.15237	NA	NA	0.62407	0.486155	NA	0.449	NA	2.17733
1434	10	69692330	69692330	T	C	intronic	HERC4	NA	NA	NA	intronic	ENSG00000148634	NA	NA	NA	NA	NA	10q21.3	NA	NA	NA	NA	rs3758392	0.38	0.38	0.346	0.324681	0.6531	0.1567	0.4712	0.056	0.4192	0.66	0.17	0.5	0.09	0.5182	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.442641	NA	NA	0.652326	0.150477	NA	0.449	NA	2.176374
1434	12	123345347	123345347	G	A	intronic	HIP1R	NA	NA	NA	intronic	ENSG00000130787	NA	NA	NA	NA	NA	12q24.31	NA	NA	Name=8	NA	rs7306948	0.95	0.95	0.943	0.933307	0.9364	0.9891	0.9798	0.9304	0.8436	0.93	0.99	0.97	0.93	0.9364	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.023435	NA	NA	0.951151	0.93733	NA	0.768	NA	2.176049
1434	16	87788756	87788756	A	G	intronic	KLHDC4	NA	NA	NA	intronic	ENSG00000104731	NA	NA	NA	NA	NA	16q24.2	NA	NA	NA	NA	rs2303770	0.75	0.75	0.747	0.772165	0.5706	0.7688	0.7767	0.9281	0.7689	0.59	0.83	0.73	0.93	0.6774	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.321533	NA	NA	0.576512	0.881256	NA	0.652	NA	2.175488
1435	2	152394534	152394534	T	G	intronic	NEB	NA	NA	NA	intronic	ENSG00000183091	NA	NA	NA	NA	NA	2q23.3	NA	NA	NA	NA	rs3732310	0.57	0.57	0.556	0.498802	0.6213	0.5585	0.6585	0.3775	0.362	0.61	0.61	0.67	0.4	0.5837	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.566918	1.566918	NA	0.620605	0.423247	NA	0.558	NA	2.174395
1435	3	47079112	47079112	G	A	intronic	SETD2	NA	NA	NA	intronic	ENSG00000181555	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs6768722	0.68	0.68	0.661	0.677516	0.6044	0.6637	0.6772	0.7829	0.6247	0.61	0.68	0.7	0.79	0.6332	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.022929	NA	NA	0.58814	0.749206	NA	0.71	NA	2.17426
1435	1	227834400	227834400	G	A	intronic	ZNF678	NA	NA	NA	intronic	ENSG00000181450	NA	NA	NA	NA	NA	1q42.13	NA	NA	NA	NA	rs6426468	0.74	0.74	0.735	0.772564	0.5736	0.8214	0.719	0.9198	0.7658	0.58	0.82	0.72	0.91	0.6584	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.030165	NA	NA	0.59428	0.861272	NA	0.645	NA	2.17372
1435	12	123335483	123335483	A	G	intronic	HIP1R	NA	NA	NA	intronic	ENSG00000130787	NA	NA	NA	NA	NA	12q24.31	NA	NA	Name=72	NA	rs2271048	0.96	0.96	0.945	0.94369	0.9364	0.9782	0.9755	0.9629	0.8671	0.93	0.98	0.97	0.96	0.9376	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.280133	NA	NA	0.952314	0.95892	NA	0.971	NA	2.173686
1435	2	219267913	219267913	A	G	intronic	CTDSP1	NA	NA	NA	intronic	ENSG00000144579	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs2227258	0.58	0.58	0.538	0.553315	0.6183	0.6994	0.6066	0.3215	0.6115	0.64	0.71	0.62	0.3	0.5945	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.984435	NA	NA	0.615349	0.381525	NA	0.413	NA	2.171851
1435	4	1659128	1659128	T	C	intronic	FAM53A	NA	NA	NA	intronic	ENSG00000174137	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs56214302	0.62	0.62	0.626	0.636981	0.6243	0.3284	0.6628	0.9486	0.5286	0.62	0.32	0.69	0.94	0.6159	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.310882	NA	NA	0.58814	0.887199	NA	0.681	NA	2.17166
1435	9	96425138	96425138	T	C	intronic	PHF2	NA	NA	NA	intronic	ENSG00000197724	NA	NA	NA	NA	NA	9q22.31	NA	NA	NA	NA	rs3750358	0.59	0.59	0.592	0.514776	0.6093	0.4931	0.4813	0.6573	0.271	0.61	0.52	0.53	0.67	0.5677	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.234031	NA	NA	0.651395	0.629823	NA	0.659	NA	2.171605
1435	8	145665699	145665699	C	T	intronic	TONSL	NA	NA	NA	intronic	ENSG00000160949	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs2721188	0.59	0.59	0.618	0.646166	0.5984	0.4921	0.5288	0.7655	0.7761	0.58	0.45	0.53	0.8	0.6182	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.34574	NA	NA	0.613076	0.721717	NA	0.623	NA	2.170324
1435	9	139410589	139410589	A	G	intronic	NOTCH1	NA	NA	NA	intronic	ENSG00000148400	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs4880099	0.74	0.74	0.703	0.686701	0.6074	0.8651	0.7594	0.7012	0.5133	0.62	0.9	0.72	0.73	0.637	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.569538	NA	NA	0.585278	0.706015	NA	0.717	NA	2.170322
1435	17	26109030	26109030	T	C	intronic	NOS2	NA	NA	NA	intronic	ENSG00000007171	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs3729508	0.64	0.64	0.629	0.682308	0.5835	0.4921	0.7248	0.8215	0.7618	0.59	0.49	0.7	0.86	0.6457	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.240454	NA	NA	0.601279	0.786201	NA	0.761	NA	2.169521
1435	8	136560952	136560952	A	G	intronic	KHDRBS3	NA	NA	NA	intronic	ENSG00000131773	NA	NA	NA	NA	NA	8q24.23	NA	NA	NA	NA	rs12545587	0.58	0.58	0.542	0.563299	0.5915	0.7817	0.6066	0.3064	0.6258	0.6	0.78	0.6	0.3	0.6457	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.150836	NA	NA	0.594828	0.381591	NA	0.442	NA	2.167972
1435	5	33648906	33648906	G	C	intronic	ADAMTS12	NA	NA	NA	intronic	ENSG00000151388	NA	NA	NA	NA	NA	5p13.3	NA	NA	NA	NA	rs6870538	0.58	0.58	0.555	0.540335	0.6014	0.7143	0.6066	0.3585	0.4969	0.59	0.71	0.62	0.37	0.5892	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.056128	2.056128	NA	0.642326	0.437358	NA	0.478	NA	2.167074
1435	22	50646936	50646936	G	C	intronic	SELO	NA	NA	NA	intronic	ENSG00000073169	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs5771102	0.71	0.71	0.718	0.701877	0.6123	0.7649	0.5937	0.8623	0.589	0.61	0.76	0.62	0.87	0.62	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.601571	NA	NA	0.601337	0.818519	NA	0.688	NA	2.166363
1435	2	153378574	153378574	A	G	intronic	FMNL2	NA	NA	NA	intronic	ENSG00000157827	NA	NA	NA	NA	NA	2q23.3	NA	NA	NA	NA	rs4664592	0.54	0.54	0.515	0.538738	0.6312	0.6141	0.5202	0.382	0.591	0.62	0.58	0.51	0.4	0.5881	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.896839	NA	NA	0.615394	0.421009	NA	0.478	NA	2.165306
1436	3	38784029	38784029	T	C	intronic	SCN10A	NA	NA	NA	intronic	ENSG00000185313	NA	NA	NA	NA	NA	3p22.2	NA	NA	NA	NA	rs6599250	0.74	0.74	0.752	0.757788	0.5865	0.8373	0.6239	0.9501	0.6871	0.58	0.86	0.61	0.94	0.6537	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.766267	1.766267	NA	0.595116	0.897413	NA	0.659	NA	2.164684
1436	5	33643617	33643617	C	T	intronic	ADAMTS12	NA	NA	NA	intronic	ENSG00000151388	NA	NA	NA	NA	NA	5p13.3	NA	NA	NA	NA	rs4866409	0.58	0.58	0.57	0.540335	0.6014	0.7153	0.6052	0.3585	0.4969	0.6	0.71	0.62	0.37	0.5912	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.189064	NA	NA	0.643023	0.438493	NA	0.478	NA	2.164377
1436	12	20803549	20803549	T	C	intronic	PDE3A	NA	NA	NA	intronic	ENSG00000172572	NA	NA	NA	NA	NA	12p12.2	NA	NA	NA	NA	rs10743384	0.57	0.57	0.553	0.539736	0.6372	0.7242	0.4813	0.3192	0.589	0.63	0.74	0.51	0.33	0.5852	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.519953	NA	NA	0.613256	0.376078	NA	0.529	NA	2.164344
1436	2	224763816	224763816	C	T	intronic	WDFY1	NA	NA	NA	intronic	ENSG00000085449	NA	NA	NA	NA	NA	2q36.1	NA	NA	Name=5	NA	rs530065	0.9	0.9	0.883	0.911142	0.9433	0.8284	0.9568	0.8775	0.9765	0.94	0.79	0.95	0.9	0.9394	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.549847	NA	NA	0.95314	0.904902	NA	0.935	NA	2.16416
1436	2	152374800	152374800	G	A	intronic	NEB	NA	NA	NA	intronic	ENSG00000183091	NA	NA	NA	NA	NA	2q23.3	NA	NA	NA	NA	rs16830136	0.61	0.61	0.605	0.535942	0.6243	0.5605	0.6643	0.5098	0.364	0.61	0.62	0.67	0.55	0.5895	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.639947	NA	NA	0.622561	0.526019	NA	0.565	NA	2.163639
1436	22	50718397	50718397	A	G	intronic	PLXNB2	NA	NA	NA	intronic	ENSG00000196576	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs28611220	0.58	0.58	0.592	0.621006	0.6163	0.6885	0.5389	0.5749	0.6769	0.59	0.65	0.51	0.54	0.6101	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.76737	NA	NA	0.610458	0.582425	NA	0.514	NA	2.163142
1436	9	139912178	139912178	G	A	intronic	ABCA2	NA	NA	NA	intronic	ENSG00000107331	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs879854	0.66	0.66	0.646	0.661941	0.5905	0.7708	0.5793	0.649	0.6994	0.6	0.77	0.6	0.65	0.6339	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.543402	1.543402	NA	0.612619	0.646739	NA	0.674	NA	2.162981
1436	7	30673345	30673345	C	T	intronic	GARS	NA	NA	NA	intronic	ENSG00000106105	NA	NA	NA	NA	NA	7p14.3	NA	NA	NA	NA	rs2240401	0.46	0.46	0.432	0.404153	0.6451	0.4861	0.5677	0.0756	0.3998	0.65	0.44	0.57	0.1	0.5525	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.580002	NA	NA	0.640049	0.164477	NA	0.304	NA	2.162351
1436	6	36766292	36766292	C	T	intronic	CPNE5	NA	NA	NA	intronic	ENSG00000124772	NA	NA	NA	NA	NA	6p21.2	NA	NA	NA	NA	rs6940728	0.66	0.66	0.647	0.654353	0.5984	0.6647	0.7205	0.7163	0.5706	0.61	0.65	0.7	0.73	0.6255	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.450227	NA	NA	0.61407	0.704721	NA	0.696	NA	2.16203
1436	16	70732761	70732761	G	C	intronic	VAC14	NA	NA	NA	intronic	ENSG00000103043	NA	NA	NA	NA	NA	16q22.1	NA	NA	NA	NA	rs9673700	0.51	0.51	0.48	0.499002	0.6491	0.248	0.5533	0.6437	0.3691	0.67	0.22	0.53	0.59	0.5623	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.153213	NA	NA	0.627093	0.640355	NA	0.616	NA	2.161507
1436	9	90387805	90387805	A	C	upstream	CTSL3P	NA	NA	NA	ncRNA_exonic	ENSG00000188029	NA	NA	NA	NA	NA	9q21.33	NA	NA	NA	NA	rs9410955	0.76	0.76	0.751	0.741214	0.6372	0.8304	0.7738	0.7943	0.6616	0.66	0.82	0.76	0.83	0.7115	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.200237	NA	NA	0.656977	0.786655	NA	0.812	NA	2.1609896
1436	1	11575375	11575375	T	A	intronic	PTCHD2	NA	NA	NA	intronic	ENSG00000204624	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs2594318	0.48	0.48	0.429	0.419129	0.6511	0.2758	0.6441	0.3124	0.3129	0.65	0.28	0.63	0.32	0.5542	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.35427	NA	NA	0.633854	0.394366	NA	0.435	NA	2.160846
1436	17	7700712	7700712	C	T	intronic	DNAH2	NA	NA	NA	intronic	ENSG00000183914	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs1565817	0.54	0.54	0.514	0.533946	0.6183	0.6181	0.6513	0.27	0.6339	0.61	0.6	0.6	0.3	0.6027	0.62	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.869577	NA	NA	0.618721	0.32887	NA	0.493	NA	2.160279
1436	21	45092257	45092257	T	A	intronic	RRP1B	NA	NA	NA	intronic	ENSG00000160208	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs2251253	0.64	0.64	0.603	0.641573	0.6103	0.8353	0.7219	0.4251	0.7096	0.6	0.83	0.67	0.47	0.6429	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.68009	NA	NA	0.586744	0.466409	ID=COSN166671;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.572	NA	2.160056
1436	1	168200733	168200733	T	C	intronic	SFT2D2	NA	NA	NA	intronic	ENSG00000213064	NA	NA	NA	NA	NA	1q24.2	NA	NA	NA	NA	rs11588504	0.51	0.51	0.477	0.435304	0.6471	0.4375	0.4971	0.2821	0.3783	0.68	0.46	0.54	0.31	0.5618	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.088536	NA	NA	0.631279	0.314344	NA	0.493	NA	2.159821
1436	2	224765894	224765894	G	A	intronic	WDFY1	NA	NA	NA	intronic	ENSG00000085449	NA	NA	NA	Score=446;Name=lod=87	NA	2q36.1	NA	NA	NA	NA	rs604990	0.9	0.9	0.885	0.911142	0.9433	0.8284	0.9568	0.8775	0.9765	0.94	0.79	0.95	0.9	0.9408	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.705182	1.705182	NA	0.956163	0.904902	NA	0.935	NA	2.159737
1436	8	143959289	143959289	T	C	intronic	CYP11B1	NA	NA	NA	intronic	ENSG00000104499,ENSG00000160882	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs7818953	0.74	0.74	0.73	0.769768	0.6203	0.8492	0.6945	0.8956	0.7249	0.6	0.84	0.65	0.88	0.6475	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.496247	NA	NA	0.572577	0.853311	NA	0.725	NA	2.159623
1436	7	100410657	100410657	A	G	intronic	EPHB4	NA	NA	NA	intronic	ENSG00000196411	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs314358	0.58	0.58	0.582	0.575479	0.6282	0.6329	0.67	0.4561	0.5562	0.61	0.6	0.6	0.48	0.6083	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.324024	NA	NA	0.606163	0.487744	NA	0.63	NA	2.157337
1436	20	44523248	44523248	T	C	intronic	CTSA	NA	NA	NA	intronic	ENSG00000064601	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs2075962	0.64	0.64	0.611	0.626997	0.6103	0.6845	0.7392	0.5983	0.544	0.63	0.66	0.69	0.56	0.6275	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.156701	NA	NA	0.60593	0.608488	NA	0.667	NA	2.15627
1436	8	143563087	143563087	C	G	intronic	BAI1	NA	NA	NA	intronic	ENSG00000181790	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs11782438	0.53	0.53	0.528	0.519968	0.6223	0.5149	0.4683	0.4365	0.5695	0.64	0.47	0.48	0.46	0.6051	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.62027	NA	NA	0.617052	0.481846	NA	0.406	NA	2.155548
1436	16	83994569	83994569	G	T	intronic	OSGIN1	NA	NA	NA	intronic	ENSG00000140961	NA	NA	NA	NA	NA	16q23.3	NA	NA	NA	NA	rs2136662	0.73	0.73	0.722	0.71246	0.6133	0.7937	0.7089	0.8056	0.6074	0.61	0.83	0.68	0.84	0.6449	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.716146	NA	NA	0.586395	0.769773	NA	0.804	NA	2.155405
1436	19	48601528	48601528	G	T	intronic	PLA2G4C	NA	NA	NA	intronic	ENSG00000105499	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs251683	0.66	0.66	0.644	0.660343	0.6074	0.7341	0.6412	0.7163	0.5767	0.58	0.71	0.65	0.73	0.6109	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.338322	NA	NA	0.626512	0.692919	NA	0.754	NA	2.155188
1437	16	1873087	1873087	C	A	intronic	HAGH	NA	NA	NA	intronic	ENSG00000063854	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs104843	0.58	0.58	0.561	0.550919	0.6083	0.5208	0.6441	0.556	0.4499	0.61	0.53	0.68	0.53	0.5953	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.587503	NA	NA	0.641461	0.585571	NA	0.536	NA	2.154939
1437	10	27454111	27454111	A	T	intronic	MASTL	NA	NA	NA	intronic	ENSG00000120539	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs7068375	0.51	0.51	0.492	0.504792	0.6024	0.4375	0.5231	0.5234	0.4356	0.59	0.38	0.55	0.51	0.5924	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.041611	2.041611	NA	0.650814	0.552429	NA	0.514	NA	2.154386
1437	1	19499835	19499835	G	C	intronic	UBR4	NA	NA	NA	intronic	ENSG00000127481	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs951908	0.72	0.72	0.706	0.71226	0.6044	0.8105	0.732	0.8215	0.5603	0.6	0.82	0.71	0.82	0.6419	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.242333	NA	NA	0.600698	0.793463	NA	0.71	NA	2.153002
1437	19	32954725	32954725	G	A	intronic	DPY19L3	NA	NA	NA	intronic	ENSG00000178904	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs1544511	0.59	0.59	0.591	0.550319	0.6412	0.6399	0.4323	0.4387	0.5992	0.66	0.65	0.51	0.48	0.5845	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.334058	1.334058	NA	0.622558	0.468452	NA	0.551	NA	2.151742
1437	2	158637137	158637137	A	G	intronic	ACVR1	NA	NA	NA	intronic	ENSG00000115170	NA	NA	NA	NA	NA	2q24.1	NA	NA	NA	NA	rs1866885	NA	NA	NA	0.714856	0.7137	0.8383	0.7738	0.6104	0.6881	NA	NA	NA	NA	0.5304	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.416995	NA	NA	0.604327	0.5551	NA	0.667	NA	2.151573
1437	2	136569848	136569848	C	A	intronic	LCT	NA	NA	NA	intronic	ENSG00000115850	NA	NA	NA	NA	NA	2q21.3	NA	NA	NA	NA	rs12988076	0.42	0.42	0.368	0.35623	0.5954	0.3998	0.4323	0.1203	0.3303	0.6	0.41	0.46	0.11	0.5569	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.347062	NA	NA	0.696649	0.235134	NA	0.464	NA	2.151051
1437	18	57147390	57147390	C	G	intronic	CCBE1	NA	NA	NA	intronic	ENSG00000183287	NA	NA	NA	NA	NA	18q21.32	NA	NA	NA	NA	rs1790508	0.73	0.73	0.709	0.711661	0.6332	0.8204	0.7334	0.7489	0.6145	0.64	0.81	0.74	0.76	0.6399	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.249076	NA	NA	0.576186	0.715227	NA	0.355	NA	2.150714
1437	9	96420390	96420390	A	G	intronic	PHF2	NA	NA	NA	intronic	ENSG00000197724	NA	NA	NA	NA	NA	9q22.31	NA	NA	NA	NA	rs3763605	0.6	0.6	0.579	0.52516	0.6103	0.4931	0.4841	0.6914	0.2751	0.61	0.52	0.54	0.71	0.5875	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.023522	NA	NA	0.652164	0.663789	NA	0.667	NA	2.150036
1437	10	96802598	96802598	A	T	intronic	CYP2C8	NA	NA	NA	intronic	ENSG00000138115	NA	NA	NA	NA	NA	10q23.33	NA	NA	NA	NA	rs2275620	0.6	0.6	0.603	0.597843	0.6352	0.4236	0.4467	0.7685	0.6155	0.61	0.47	0.53	0.76	0.5891	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.14492	NA	NA	0.626395	0.762823	NA	0.594	NA	2.149305
1437	4	37636750	37636750	T	G	intronic	RELL1	NA	NA	NA	intronic	ENSG00000181826	NA	NA	NA	NA	NA	4p14	NA	NA	NA	NA	rs2276943	0.56	0.56	0.551	0.575879	0.6282	0.4683	0.611	0.528	0.6728	0.62	0.45	0.63	0.55	0.6024	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.74928	NA	NA	0.620165	0.54418	NA	0.609	NA	2.149235
1437	17	38189055	38189055	A	G	intronic	MED24	NA	NA	NA	intronic	ENSG00000008838	NA	NA	NA	NA	NA	17q21.1	NA	NA	NA	NA	rs3935280	0.61	0.61	0.611	0.626997	0.6163	0.5625	0.6556	0.6029	0.7168	0.61	0.57	0.65	0.64	0.629	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.729195	NA	NA	0.605465	0.604857	NA	0.652	NA	2.149235
1437	8	99162888	99162888	A	G	intronic	POP1	NA	NA	NA	intronic	ENSG00000104356	NA	NA	NA	NA	NA	8q22.2	NA	NA	NA	NA	rs4735530	0.67	0.67	0.675	0.700879	0.6203	0.4613	0.6542	0.9834	0.682	0.63	0.47	0.65	0.98	0.6417	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.042906	NA	NA	0.590349	0.914889	NA	0.819	NA	2.147651
1437	1	19510394	19510394	A	G	intronic	UBR4	NA	NA	NA	intronic	ENSG00000127481	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs3762396	0.72	0.72	0.718	0.716853	0.6064	0.8105	0.7305	0.8374	0.5613	0.6	0.82	0.71	0.82	0.6444	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.619539	NA	NA	0.602093	0.807535	NA	0.732	NA	2.147107
1437	2	136558157	136558157	C	T	intronic	LCT	NA	NA	NA	intronic	ENSG00000115850	NA	NA	NA	NA	NA	2q21.3	NA	NA	NA	NA	rs748841	0.43	0.43	0.417	0.372204	0.5954	0.3978	0.4366	0.1793	0.3313	0.6	0.41	0.46	0.17	0.5604	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.096549	NA	NA	0.697558	0.280073	NA	0.471	NA	2.146642
1437	21	45064296	45064296	C	A	intronic	HSF2BP	NA	NA	NA	intronic	ENSG00000160207	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs2246602	0.66	0.66	0.647	0.667532	0.6173	0.8056	0.7003	0.5658	0.6912	0.61	0.79	0.66	0.6	0.6497	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.201391	NA	NA	0.587907	0.61507	NA	0.587	NA	2.145093
1438	1	19491857	19491857	T	C	intronic	UBR4	NA	NA	NA	intronic	ENSG00000127481	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs3748757	0.73	0.73	0.714	0.718051	0.6083	0.8105	0.7363	0.8366	0.5624	0.6	0.82	0.72	0.82	0.645	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.593163	NA	NA	0.602791	0.806627	NA	0.732	NA	2.143909
1438	12	124220055	124220055	T	C	intronic	ATP6V0A2	NA	NA	NA	intronic	ENSG00000185344	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs2271660	0.68	0.68	0.653	0.679912	0.6093	0.9464	0.7363	0.4879	0.6973	0.61	0.95	0.71	0.43	0.6415	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.025349	NA	NA	0.60686	0.502497	NA	0.703	NA	2.14234
1438	10	115401264	115401264	A	G	intronic	NRAP	NA	NA	NA	intronic	ENSG00000197893	NA	NA	NA	NA	NA	10q25.3	NA	NA	NA	NA	rs3121465	0.58	0.58	0.564	0.564297	0.6243	0.7103	0.6715	0.2965	0.638	0.61	0.71	0.68	0.33	0.6188	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.852015	NA	NA	0.614884	0.351566	NA	0.594	NA	2.142016
1438	1	22310145	22310145	C	T	intronic	CELA3B	NA	NA	NA	intronic	ENSG00000219073	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs10733032	0.84	0.84	0.752	0.847843	0.9672	0.755	0.9366	0.7095	0.9448	0.97	0.71	0.94	0.72	0.8911	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.172922	NA	NA	NA	NA	NA	0.804	NA	2.1417
1438	10	124271595	124271595	G	A	intronic	HTRA1	NA	NA	NA	intronic	ENSG00000166033	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs2272599	0.6	0.6	0.625	0.627995	0.6223	0.6071	0.464	0.7239	0.6421	0.6	0.62	0.49	0.67	0.6113	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.485738	NA	NA	0.625349	0.699955	NA	0.71	NA	2.141051
1438	12	104733165	104733165	A	G	intronic	TXNRD1	NA	NA	NA	intronic	ENSG00000198431	NA	NA	NA	NA	NA	12q23.3	NA	NA	NA	NA	rs10861202	0.63	0.63	0.612	0.600639	0.6113	0.7817	0.5994	0.503	0.5358	0.6	0.81	0.59	0.5	0.6214	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.014501	NA	NA	0.62657	0.531963	NA	0.674	NA	2.14073
1438	11	93534990	93534990	G	A	intronic	MED17	NA	NA	NA	intronic	ENSG00000042429	NA	NA	NA	NA	NA	11q21	NA	NA	NA	NA	rs655699	0.57	0.57	0.511	0.527556	0.6302	0.7401	0.7305	0.1619	0.5532	0.64	0.74	0.7	0.16	0.6075	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.451922	NA	NA	0.622527	0.229214	NA	0.348	NA	2.139773
1438	19	48601350	48601350	T	C	intronic	PLA2G4C	NA	NA	NA	intronic	ENSG00000105499	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs251685	0.63	0.63	0.613	0.6252	0.6123	0.7411	0.6124	0.5968	0.5665	0.59	0.72	0.62	0.61	0.61	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.055314	NA	NA	0.638256	0.602133	NA	0.696	NA	2.139444
1438	6	116878947	116878947	C	T	intronic	FAM26D	NA	NA	NA	intronic	ENSG00000164451	NA	NA	NA	NA	NA	6q22.1	NA	NA	NA	NA	rs6906668	0.66	0.66	0.639	0.642572	0.6123	0.8978	0.7349	0.4198	0.6462	0.61	0.9	0.7	0.42	0.6384	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.423046	NA	NA	0.609884	0.470936	NA	0.536	NA	2.139416
1438	5	7862926	7862926	T	C	intronic	FASTKD3	NA	NA	NA	intronic	ENSG00000124279	NA	NA	NA	NA	NA	5p15.31	NA	NA	NA	NA	rs3733784	0.45	0.45	0.45	0.445088	0.6461	0.3125	0.379	0.3101	0.6043	0.66	0.3	0.41	0.33	0.5627	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.681052	NA	NA	0.651977	0.326146	NA	0.428	NA	2.139223
1438	2	220033830	220033830	A	G	intronic	SLC23A3	NA	NA	NA	intronic	ENSG00000213901	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs3795986	0.44	0.44	0.412	0.413339	0.6541	0.2292	0.4179	0.2436	0.5818	0.67	0.25	0.47	0.27	0.5646	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.184215	NA	NA	0.642109	0.320837	NA	0.5	NA	2.139191
1438	5	176018545	176018545	G	A	intronic	CDHR2	NA	NA	NA	intronic	ENSG00000074276	NA	NA	NA	NA	NA	5q35.2	NA	NA	NA	NA	rs11134984	NA	NA	0.715	0.770567	0.9245	0.7887	0.8631	0.5408	0.8384	NA	NA	NA	NA	NA	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.057094	NA	NA	0.937146	0.589595	NA	0.522	NA	2.138354
1438	20	31291161	31291161	C	T	UTR3	COMMD7	NM_001099339:c.*23G>A,NM_053041:c.*23G>A	NA	NA	UTR3	ENSG00000149600	ENST00000278980:c.*23G>A,ENST00000446419:c.*23G>A	NA	NA	NA	NA	20q11.21	NA	NA	NA	NA	rs9421	0.61	0.61	0.606	0.59385	0.7594	0.4772	0.487	0.5378	0.6953	0.76	0.45	0.56	0.6	0.672	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.487914	NA	NA	0.763704	0.616972	NA	0.652	NA	2.1382294
1438	8	41585571	41585571	C	T	intronic	ANK1	NA	NA	NA	intronic	ENSG00000029534	NA	NA	NA	NA	NA	8p11.21	NA	NA	NA	NA	rs1872877	0.54	0.54	0.532	0.566693	0.6402	0.3363	0.6023	0.643	0.6002	0.65	0.31	0.58	0.62	0.5946	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.176789	2.176789	NA	0.627093	0.629596	NA	0.609	NA	2.138107
1438	17	61838259	61838259	G	A	intronic	CCDC47	NA	NA	NA	intronic	ENSG00000108588	NA	NA	NA	NA	NA	17q23.3	NA	NA	NA	NA	rs11654841	0.68	0.68	0.704	0.726438	0.5974	0.5565	0.6787	0.9569	0.7566	0.6	0.59	0.63	0.96	0.6584	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.196511	NA	NA	0.606163	0.893781	NA	0.681	NA	2.138037
1438	2	240055901	240055901	G	A	intronic	HDAC4	NA	NA	NA	intronic	ENSG00000068024	NA	NA	NA	NA	NA	2q37.3	NA	NA	NA	NA	rs2278778	0.58	0.58	0.554	0.588858	0.6193	0.8562	0.6182	0.1407	0.8671	0.62	0.87	0.59	0.18	0.6357	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.038743	NA	NA	0.607093	0.212988	NA	0.565	NA	2.137907
1438	17	61902822	61902822	C	G	intronic	FTSJ3	NA	NA	NA	intronic	ENSG00000108592	NA	NA	NA	NA	NA	17q23.3	NA	NA	NA	NA	rs716880	0.68	0.68	0.692	0.726438	0.5984	0.5556	0.6787	0.9569	0.7566	0.6	0.58	0.63	0.96	0.6584	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.195852	NA	NA	0.606512	0.894235	NA	0.674	NA	2.136688
1438	7	47319723	47319723	C	T	intronic	TNS3	NA	NA	NA	UTR3	ENSG00000136205	ENST00000428457:c.*35G>A	NA	NA	NA	NA	7p12.3	NA	NA	NA	NA	rs4720590	0.71	0.71	0.708	0.710463	0.674	0.5933	0.781	0.7988	0.6994	0.66	0.65	0.75	0.8	0.6861	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.411161	NA	NA	0.670304	0.777016	NA	0.739	NA	2.1362627
1438	16	57954268	57954268	A	G	intronic	CNGB1	NA	NA	NA	intronic	ENSG00000070729	NA	NA	NA	NA	NA	16q21	NA	NA	NA	NA	rs166000	0.66	0.66	0.626	0.691094	0.6133	0.7133	0.585	0.7156	0.7904	0.6	0.74	0.59	0.7	0.639	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.724625	NA	NA	0.611938	0.701168	NA	0.594	NA	2.135762
1438	17	67081732	67081732	C	T	intronic	ABCA6	NA	NA	NA	intronic	ENSG00000154262	NA	NA	NA	NA	NA	17q24.2	NA	NA	NA	NA	rs2302133	0.46	0.46	0.42	0.482428	0.6441	0.3194	0.5605	0.3563	0.5992	0.64	0.26	0.54	0.35	0.5825	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.645019	NA	NA	0.637674	0.387199	NA	0.42	NA	2.135726
1438	15	100251015	100251015	C	G	intronic	MEF2A	NA	NA	NA	intronic	ENSG00000068305	NA	NA	NA	NA	NA	15q26.3	NA	NA	NA	NA	rs325403	0.58	0.58	0.561	0.547324	0.6083	0.6796	0.6988	0.2912	0.5869	0.62	0.7	0.69	0.32	0.6125	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.153773	NA	NA	0.643576	0.375114	NA	0.457	NA	2.135624
1438	4	57189498	57189498	G	A	intronic	KIAA1211	NA	NA	NA	intronic	ENSG00000109265	NA	NA	NA	NA	NA	4q12	NA	NA	NA	NA	rs2292985	0.54	0.54	0.501	0.550519	0.6322	0.5327	0.7017	0.3411	0.6605	0.63	0.52	0.67	0.34	0.613	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.552594	NA	NA	0.619232	0.401707	NA	0.558	NA	2.135568
1439	3	182681853	182681853	T	C	intronic	DCUN1D1	NA	NA	NA	intronic	ENSG00000043093	NA	NA	NA	NA	NA	3q26.33	NA	NA	NA	NA	rs4859147	0.38	0.38	0.309	0.377796	0.6501	0.2421	0.5865	0.0325	0.5562	0.64	0.21	0.52	0.05	0.5527	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.281606	NA	NA	0.662674	0.144122	NA	0.29	NA	2.134526
1439	8	142176507	142176507	T	C	intronic	DENND3	NA	NA	NA	intronic	ENSG00000105339	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs412706	0.64	0.64	0.63	0.67472	0.6153	0.5506	0.6052	0.8177	0.7198	0.61	0.55	0.65	0.79	0.6434	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.035186	NA	NA	0.607126	0.784385	NA	0.522	NA	2.134174
1439	1	203040816	203040816	G	C	intronic	PPFIA4	NA	NA	NA	intronic	ENSG00000143847	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs2270540	0.55	0.55	0.523	0.549121	0.6223	0.4573	0.5216	0.525	0.6207	0.65	0.42	0.54	0.56	0.618	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.08916	NA	NA	0.626468	0.556359	ID=COSM146737;OCCURENCE=1(stomach)	0.659	NA	2.133232
1439	6	116429623	116429623	T	A	intronic	NT5DC1	NA	NA	NA	intronic	ENSG00000178425	NA	NA	NA	NA	NA	6q22.1	NA	NA	NA	NA	rs517352	0.63	0.63	0.6	0.659345	0.6014	0.7589	0.6916	0.5053	0.8016	0.6	0.77	0.66	0.48	0.6623	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.08291	NA	NA	0.603164	0.524058	NA	0.681	NA	2.133136
1439	6	47654817	47654817	C	A	intronic	GPR111	NA	NA	NA	intronic	ENSG00000153294,ENSG00000164393	NA	NA	NA	NA	NA	6p12.3	NA	NA	NA	NA	rs1556133	0.46	0.46	0.498	0.51897	0.6262	0.3085	0.4352	0.469	0.7526	0.59	0.29	0.48	0.46	0.5949	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.489323	NA	NA	0.646144	0.46703	NA	0.428	NA	2.132756
1439	8	101232701	101232701	T	C	intronic	SPAG1	NA	NA	NA	intronic	ENSG00000104450	NA	NA	NA	NA	NA	8q22.2	NA	NA	NA	NA	rs2919471	0.68	0.68	0.69	0.686302	0.6183	0.5952	0.719	0.8563	0.5971	0.63	0.58	0.72	0.85	0.641	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.122146	NA	NA	0.608953	0.818202	ID=COSN168389;OCCURENCE=1(large_intestine)	0.652	NA	2.131747
1439	1	201338896	201338896	T	C	intronic	TNNT2	NA	NA	NA	intronic	ENSG00000118194	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs10920184	0.54	0.54	0.514	0.529952	0.6511	0.4653	0.7176	0.3132	0.6319	0.65	0.49	0.72	0.31	0.5969	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.639119	NA	NA	0.621047	0.34453	NA	0.536	NA	2.130953
1439	2	28816948	28816948	C	T	intronic	PLB1	NA	NA	NA	UTR3	ENSG00000163803	ENST00000329020:c.*28C>T,ENST00000436544:c.*28C>T	NA	NA	NA	NA	2p23.2	NA	NA	NA	NA	rs4665429	0.5	0.5	0.457	0.488019	0.6899	0.1458	0.6715	0.4145	0.6022	0.69	0.17	0.66	0.46	0.6363	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.732501	NA	NA	0.710196	0.46347	NA	0.464	NA	2.1302707
1439	11	76227182	76227182	G	A	intronic	C11orf30	NA	NA	NA	intronic	ENSG00000158636	NA	NA	NA	NA	NA	11q13.5	NA	NA	NA	NA	rs2508740	0.65	0.65	0.616	0.636182	0.6213	0.8006	0.755	0.3828	0.7403	0.63	0.81	0.73	0.42	0.6438	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.328308	NA	NA	0.605079	0.442273	NA	0.63	NA	2.129821
1439	12	81329536	81329536	A	C	ncRNA_exonic	MIR618	NA	NA	NA	ncRNA_exonic	ENSG00000208022	NA	NA	NA	NA	NA	12q21.31	NA	NA	NA	NA	rs2682818	0.77	0.77	0.755	0.757588	0.8549	0.747	0.8818	0.6604	0.7117	0.86	0.73	0.85	0.6	0.8258	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.057088	NA	NA	0.856505	0.699298	NA	0.826	NA	2.1294616
1439	2	43871983	43871983	T	C	intronic	PLEKHH2	NA	NA	NA	intronic	ENSG00000152527	NA	NA	NA	NA	NA	2p21	NA	NA	NA	NA	rs12105773	0.58	0.58	0.577	0.581869	0.6282	0.2808	0.5476	0.8026	0.5706	0.63	0.31	0.58	0.82	0.6033	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.031091	NA	NA	0.640233	0.770767	ID=COSN166078;OCCURENCE=1(NS)	0.522	NA	2.128267
1439	4	107154273	107154273	T	C	intronic	TBCK	NA	NA	NA	intronic	ENSG00000145348	NA	NA	NA	NA	NA	4q24	NA	NA	NA	NA	rs13138528	0.58	0.58	0.55	0.552716	0.6332	0.5635	0.6066	0.5076	0.4816	0.64	0.58	0.57	0.5	0.6049	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.049305	NA	NA	0.633666	0.527903	NA	0.659	NA	2.128234
1439	22	45218223	45218223	C	T	intronic	ARHGAP8,PRR5-ARHGAP8	NA	NA	NA	intronic	ENSG00000241484,ENSG00000248405	NA	NA	NA	NA	NA	22q13.31	NA	Name=MafK_(ab50322)	NA	NA	rs136662	0.96	0.96	0.942	0.945487	0.9622	0.9087	0.9654	0.9697	0.9192	0.97	0.92	0.96	0.97	0.9493	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.268196	NA	NA	0.960581	0.97231	NA	0.942	NA	2.127919
1439	17	26100321	26100321	A	G	intronic	NOS2	NA	NA	NA	intronic	ENSG00000007171	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs2248814	0.69	0.69	0.677	0.727636	0.6034	0.6567	0.6455	0.8457	0.8272	0.59	0.68	0.67	0.87	0.6565	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.114132	NA	NA	0.612819	0.793896	NA	0.862	NA	2.127281
1439	5	115428439	115428439	T	A	intronic	COMMD10	NA	NA	NA	intronic	ENSG00000145781	NA	NA	NA	NA	NA	5q23.1	NA	NA	NA	NA	rs6894046	0.48	0.48	0.451	0.441693	0.66	0.3839	0.5346	0.1725	0.5746	0.67	0.39	0.62	0.2	0.5707	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.350573	NA	NA	0.642026	0.254095	NA	0.413	NA	2.127274
1439	19	15769625	15769625	A	G	intronic	CYP4F3	NA	NA	NA	intronic	ENSG00000186529	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs1915390	0.72	0.72	0.715	0.721446	0.6243	0.8204	0.7305	0.7791	0.635	0.63	0.82	0.71	0.76	0.6474	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.365084	NA	NA	0.602209	0.772129	NA	0.522	NA	2.126091
1440	14	69392264	69392264	T	G	intronic	ACTN1	NA	NA	NA	intronic	ENSG00000072110	NA	NA	NA	NA	NA	14q24.1	NA	NA	NA	NA	rs4899272	0.76	0.76	0.735	0.803115	0.5736	0.9851	0.7637	0.7844	0.9049	0.6	0.99	0.74	0.77	0.7103	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.951354	NA	NA	0.591744	0.742624	NA	0.645	NA	2.124356
1440	12	122281575	122281575	A	G	intronic	HPD	NA	NA	NA	intronic	ENSG00000158104	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs1795963	0.73	0.73	0.748	0.764577	0.5994	0.8681	0.6282	0.8752	0.7751	0.59	0.83	0.66	0.89	0.6627	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.529377	NA	NA	0.614186	0.84975	NA	0.732	NA	2.123714
1440	17	29653293	29653293	T	C	intronic	NF1	NA	NA	NA	intronic	ENSG00000196712	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs9894648	0.61	0.61	0.615	0.605831	0.6392	0.4494	0.4654	0.764	0.6186	0.65	0.48	0.51	0.76	0.6001	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.54203	NA	NA	0.637442	0.753291	NA	0.58	NA	2.123258
1440	7	150731338	150731338	G	C	intronic	ABCB8	NA	NA	NA	intronic	ENSG00000197150	NA	NA	NA	NA	NA	7q36.1	NA	NA	NA	NA	rs2303923	0.75	0.75	0.752	0.736222	0.5934	0.7034	0.7478	0.9523	0.6166	0.63	0.74	0.72	0.95	0.6705	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.245137	NA	NA	0.613256	0.90808	NA	0.725	NA	2.122844
1440	5	135186075	135186075	A	G	intronic	SLC25A48	NA	NA	NA	intronic	ENSG00000145832	NA	NA	NA	NA	NA	5q31.1	NA	NA	NA	NA	rs2304077	0.65	0.65	0.65	0.665136	0.6292	0.7113	0.5605	0.6914	0.6933	0.62	0.66	0.6	0.71	0.6249	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.033746	NA	NA	0.623197	0.694642	NA	0.754	NA	2.122703
1440	3	119373301	119373301	G	A	intronic	POPDC2	NA	NA	NA	intronic	ENSG00000121577	NA	NA	NA	NA	NA	3q13.33	NA	NA	NA	NA	rs2688630	0.58	0.58	0.569	0.591653	0.6252	0.75	0.5447	0.3548	0.7474	0.64	0.72	0.56	0.36	0.6164	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.063822	NA	NA	0.63593	0.404448	NA	0.522	NA	2.12247
1440	20	60712511	60712511	A	G	intronic	PSMA7	NA	NA	NA	exonic	ENSG00000101182	NA	unknown	UNKNOWN	NA	NA	20q13.33	NA	NA	NA	NA	rs2281740	0.73	0.73	0.711	0.686901	0.8111	0.7748	0.768	0.4569	0.7219	0.82	0.8	0.78	0.46	0.7654	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.041283	NA	0.01	0.801163	0.498184	NA	0.659	NA	2.122337
1440	3	53263279	53263279	A	G	intronic	TKT	NA	NA	NA	intronic	ENSG00000163931	NA	NA	NA	NA	NA	3p21.1	NA	NA	NA	NA	rs3736156	0.57	0.57	0.551	0.600639	0.6322	0.752	0.5591	0.2927	0.8579	0.61	0.74	0.55	0.31	0.6221	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.850263	NA	NA	0.623837	0.358829	NA	0.536	NA	2.121863
1440	21	46191270	46191270	C	T	UTR3	UBE2G2	NM_001202489:c.*22G>A,NM_182688:c.*22G>A,NM_003343:c.*22G>A	NA	NA	UTR3	ENSG00000184787	ENST00000345496:c.*22G>A,ENST00000491513:c.*446G>A,ENST00000330942:c.*22G>A	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs11569	0.8	0.8	0.784	0.795527	0.7256	0.7669	0.732	0.9297	0.7607	0.74	0.8	0.73	0.94	0.7575	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.074956	NA	NA	0.728372	0.921471	NA	0.717	NA	2.1218614
1440	3	119373315	119373315	T	C	intronic	POPDC2	NA	NA	NA	intronic	ENSG00000121577	NA	NA	NA	NA	NA	3q13.33	NA	NA	NA	NA	rs2688629	0.58	0.58	0.563	0.590855	0.6252	0.75	0.5447	0.3548	0.7434	0.64	0.72	0.56	0.36	0.6174	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.1966	NA	NA	0.636163	0.404222	NA	0.522	NA	2.121237
1440	19	49143025	49143025	T	C	ncRNA_intronic	SEC1P	NA	NA	NA	ncRNA_intronic	ENSG00000232871	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs2303147	0.77	0.77	0.739	0.774561	0.8767	0.629	0.8184	0.761	0.8067	0.88	0.6	0.82	0.74	0.814	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.416037	NA	NA	0.855465	0.785974	NA	0.775	NA	2.1205016
1440	8	17406183	17406183	A	G	intronic	SLC7A2	NA	NA	NA	intronic	ENSG00000003989	NA	NA	NA	NA	NA	8p22	NA	NA	NA	NA	rs737039	0.58	0.58	0.553	0.520567	0.6491	0.5942	0.6614	0.348	0.4458	0.65	0.61	0.67	0.36	0.5912	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.126386	NA	NA	0.639884	0.399228	NA	0.536	NA	2.119816
1440	13	110857823	110857823	C	T	intronic	COL4A1	NA	NA	NA	intronic	ENSG00000187498	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs482757	0.59	0.59	0.599	0.59345	0.6233	0.7708	0.5187	0.3835	0.7168	0.61	0.76	0.56	0.38	0.6193	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.4682	NA	NA	0.638721	0.431684	NA	0.493	NA	2.118679
1440	2	86737649	86737649	G	A	intronic	CHMP3,RNF103-CHMP3	NA	NA	NA	intronic	ENSG00000115561,ENSG00000249884	NA	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs966477	0.71	0.71	0.694	0.671326	0.6282	0.9375	0.6787	0.5711	0.5716	0.65	0.96	0.64	0.57	0.6474	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.283742	NA	NA	0.605814	0.570359	NA	0.652	NA	2.118586
1440	8	139151375	139151375	C	T	intronic	FAM135B	NA	NA	NA	intronic	ENSG00000147724	NA	NA	NA	NA	NA	8q24.23	NA	NA	NA	NA	rs4634694	0.58	0.58	0.555	0.546725	0.6412	0.5605	0.6268	0.385	0.5971	0.64	0.56	0.6	0.48	0.6119	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.98067	NA	NA	0.628375	0.436877	NA	0.688	NA	2.118525
1440	17	48469724	48469724	T	C	intronic	LRRC59	NA	NA	NA	intronic	ENSG00000108829	NA	NA	NA	NA	NA	17q21.33	NA	NA	NA	NA	rs757509	0.49	0.49	0.478	0.483626	0.6471	0.2113	0.5965	0.4924	0.5041	0.65	0.21	0.6	0.5	0.5857	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.047251	NA	NA	0.64907	0.516341	NA	0.5	NA	2.11813
1440	1	209950681	209950681	T	C	intronic	TRAF3IP3	NA	NA	NA	intronic	ENSG00000009790	NA	NA	NA	NA	NA	1q32.2	NA	NA	NA	NA	rs649275	0.64	0.64	0.589	0.613818	0.6243	0.6329	0.6729	0.5923	0.5706	0.62	0.67	0.68	0.61	0.6226	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.452183	NA	NA	0.635116	0.564685	NA	0.587	NA	2.117984
1440	17	67109894	67109894	C	T	intronic	ABCA6	NA	NA	NA	intronic	ENSG00000154262	NA	NA	NA	NA	NA	17q24.3	NA	NA	NA	NA	rs9282552	0.43	0.43	0.407	0.455072	0.6431	0.3472	0.5504	0.2383	0.5982	0.64	0.29	0.52	0.22	0.5939	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.64864	NA	NA	0.645034	0.323196	NA	0.428	NA	2.117966
1440	17	26092555	26092555	G	A	intronic	NOS2	NA	NA	NA	intronic	ENSG00000007171	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs2297512	0.69	0.69	0.714	0.730032	0.6123	0.6706	0.6484	0.8056	0.8681	0.6	0.69	0.68	0.84	0.6582	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.59328	NA	NA	0.611565	0.774076	NA	0.848	NA	2.117935
1440	1	45474157	45474157	G	A	intronic	HECTD3	NA	NA	NA	UTR5	ENSG00000126107	ENST00000372168:c.-96C>T	NA	NA	NA	NA	1p34.1	NA	NA	NA	NA	rs2298006	0.59	0.59	0.591	0.570088	0.7137	0.5853	0.4986	0.3828	0.7106	0.71	0.61	0.57	0.39	0.6394	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.396659	NA	NA	0.696262	0.427182	NA	0.435	NA	2.1173047
1440	1	2411451	2411451	A	G	intronic	PLCH2	NA	NA	NA	intronic	ENSG00000149527	NA	NA	NA	NA	NA	1p36.32	NA	NA	NA	NA	rs10797428	0.64	0.64	0.603	0.65655	0.6203	0.7758	0.6585	0.5658	0.6922	0.6	0.76	0.67	0.56	0.6363	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.526078	NA	NA	0.626248	0.609375	NA	0.514	NA	2.117152
1440	2	73650122	73650122	T	A	intronic	ALMS1	NA	NA	NA	intronic	ENSG00000116127	NA	NA	NA	NA	NA	2p13.1	NA	NA	NA	NA	rs1881246	0.54	0.54	0.491	0.532748	0.6501	0.7877	0.562	0.1044	0.7076	0.64	0.76	0.59	0.1	0.6033	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.761652	1.761652	NA	0.630196	0.221983	NA	0.464	NA	2.116404
1440	13	110859743	110859743	C	T	intronic	COL4A1	NA	NA	NA	intronic	ENSG00000187498	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs598893	0.59	0.59	0.566	0.596046	0.6233	0.7698	0.5216	0.3835	0.729	0.62	0.76	0.56	0.38	0.621	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.137531	NA	NA	0.639419	0.430549	NA	0.493	NA	2.116281
1440	8	17921921	17921921	T	C	intronic	ASAH1	NA	NA	NA	intronic	ENSG00000104763	NA	NA	NA	NA	NA	8p22	NA	NA	NA	NA	rs2073574	0.58	0.58	0.592	0.566294	0.6421	0.4921	0.487	0.6831	0.4632	0.65	0.5	0.46	0.64	0.6009	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.047984	NA	NA	0.641643	0.671896	NA	0.609	NA	2.115357
1440	6	47684591	47684591	G	A	intronic	GPR115	NA	NA	NA	intronic	ENSG00000153294	NA	NA	NA	NA	NA	6p12.3	NA	NA	NA	NA	rs1360157	0.49	0.49	0.49	0.51857	0.6352	0.3075	0.4308	0.4894	0.7178	0.63	0.3	0.49	0.49	0.5986	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.197349	NA	NA	0.65093	0.472991	NA	0.435	NA	2.11527
1440	19	15757927	15757927	T	C	intronic	CYP4F3	NA	NA	NA	intronic	ENSG00000186529	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs1290626	0.75	0.75	0.746	0.7502	0.6233	0.8492	0.745	0.8623	0.6309	0.63	0.85	0.72	0.84	0.6554	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.176155	NA	NA	0.606279	0.836813	NA	0.681	NA	2.115021
1441	18	203081	203081	A	C	intronic	USP14	NA	NA	NA	intronic	ENSG00000101557	NA	NA	NA	NA	NA	18p11.32	NA	NA	NA	NA	rs471274	0.61	0.61	0.601	0.653155	0.6272	0.5397	0.7017	0.6059	0.8262	0.63	0.57	0.69	0.59	0.6471	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.155652	NA	NA	0.611279	0.578302	NA	0.645	NA	2.114421
1441	13	110857895	110857895	A	G	intronic	COL4A1	NA	NA	NA	intronic	ENSG00000187498	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs677877	0.59	0.59	0.588	0.596446	0.6243	0.7708	0.5216	0.3843	0.728	0.62	0.76	0.56	0.38	0.6222	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.853044	NA	NA	0.640116	0.4335	NA	0.493	NA	2.113384
1441	20	257812	257812	T	C	intronic	C20orf96	NA	NA	NA	intronic	ENSG00000196476	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs6046375	0.7	0.7	0.709	0.677516	0.6302	0.6935	0.5187	0.8775	0.5521	0.65	0.7	0.53	0.88	0.624	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.574041	NA	NA	0.632674	0.846119	NA	0.609	NA	2.113126
1441	22	50655098	50655098	A	G	intronic	SELO	NA	NA	NA	intronic	ENSG00000073169	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs2272851	0.72	0.72	0.704	0.711661	0.6163	0.7659	0.5994	0.8888	0.5941	0.61	0.75	0.63	0.9	0.6627	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.361108	NA	NA	0.608432	0.858405	NA	0.696	NA	2.112568
1441	3	3189398	3189398	A	G	intronic	TRNT1	NA	NA	NA	intronic	ENSG00000072756	NA	NA	NA	NA	NA	3p26.2	NA	NA	NA	NA	rs1669348	0.42	0.42	0.417	0.400759	0.6759	0.2163	0.4164	0.3018	0.4305	0.66	0.18	0.46	0.32	0.543	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.071139	2.071139	NA	0.670323	0.392822	NA	0.558	NA	2.110777
1441	12	15073831	15073831	G	C	intronic	ERP27	NA	NA	NA	intronic	ENSG00000139055	NA	NA	NA	NA	NA	12p12.3	NA	NA	NA	NA	rs2445382	0.68	0.68	0.68	0.680911	0.6203	0.8562	0.6066	0.6248	0.6912	0.63	0.87	0.59	0.6	0.6569	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.359023	NA	NA	0.612442	0.631412	NA	0.565	NA	2.110358
1441	16	3117937	3117937	G	A	intronic	IL32	NA	NA	NA	intronic	ENSG00000008517	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs2239303	0.57	0.57	0.573	0.563099	0.6262	0.495	0.5303	0.5787	0.5706	0.61	0.53	0.54	0.58	0.6079	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.657431	NA	NA	0.656279	0.598999	NA	0.601	NA	2.109621
1441	1	157485561	157485561	G	A	intronic	FCRL5	NA	NA	NA	intronic	ENSG00000143297	NA	NA	NA	NA	NA	1q23.1	NA	NA	NA	NA	rs3811035	0.51	0.51	0.465	0.504792	0.6252	0.6558	0.6484	0.09	0.684	0.62	0.64	0.62	0.1	0.6255	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.16307	NA	NA	0.640116	0.172038	NA	0.464	NA	2.109184
1441	1	17736578	17736578	A	G	intronic	RCC2	NA	NA	NA	intronic	ENSG00000179051	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs2762890	0.63	0.63	0.626	0.63778	0.6093	0.5476	0.647	0.6929	0.6789	0.63	0.57	0.67	0.7	0.6427	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.340776	NA	NA	0.638953	0.69882	NA	0.609	NA	2.109047
1441	6	42928758	42928758	T	G	intronic	GNMT	NA	NA	NA	intronic	ENSG00000124713	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs2296805	0.61	0.61	0.622	0.644968	0.5885	0.3075	0.6095	0.9697	0.637	0.6	0.33	0.59	0.96	0.6409	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.097551	NA	NA	0.662964	0.933274	NA	0.732	NA	2.107636
1441	10	127436411	127436411	T	C	intronic	C10orf137	NA	NA	NA	ncRNA_intronic	ENSG00000236991	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs2296832	0.71	0.71	0.701	0.70008	0.7485	0.8889	0.5187	0.5454	0.7935	0.76	0.88	0.55	0.53	0.7236	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.039399	NA	NA	0.755233	0.559691	NA	0.681	NA	2.1060003
1441	19	6732018	6732018	C	T	intronic	GPR108	NA	NA	NA	intronic	ENSG00000125734	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs2291666	0.55	0.55	0.526	0.510783	0.6441	0.5635	0.6369	0.323	0.4836	0.63	0.56	0.62	0.37	0.5991	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.060923	NA	NA	0.65138	0.388481	NA	0.449	NA	2.10542
1442	6	138197331	138197331	A	C	intronic	TNFAIP3	NA	NA	NA	intronic	ENSG00000118503	NA	NA	NA	NA	NA	6q23.3	NA	NA	NA	NA	rs661561	0.56	0.56	0.524	0.533546	0.6412	0.8492	0.5706	0.1067	0.6483	0.65	0.83	0.55	0.11	0.6123	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.464413	NA	NA	0.641512	0.176577	NA	0.435	NA	2.104988
1442	2	209315573	209315573	G	A	intronic	PTH2R	NA	NA	NA	intronic	ENSG00000144407	NA	NA	NA	NA	NA	2q34	NA	NA	NA	NA	rs1370371	0.63	0.63	0.608	0.572684	0.6571	0.8671	0.6499	0.2247	0.5982	0.67	0.87	0.64	0.28	0.6119	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.001659	NA	NA	0.626628	0.267136	NA	0.543	NA	2.104372
1442	8	2054012	2054012	C	T	intronic	MYOM2	NA	NA	NA	intronic	ENSG00000036448	NA	NA	NA	NA	NA	8p23.3	NA	NA	NA	NA	rs12677887	0.48	0.48	0.454	0.441893	0.6581	0.3889	0.4899	0.2663	0.4775	0.67	0.38	0.5	0.28	0.576	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.487894	NA	NA	0.66186	0.331139	NA	0.428	NA	2.10404
1442	10	3155428	3155428	C	T	intronic	PFKP	NA	NA	NA	intronic	ENSG00000067057	NA	NA	NA	NA	NA	10p15.2	NA	NA	NA	NA	rs3816701	0.59	0.59	0.57	0.568291	0.6551	0.8115	0.5634	0.2852	0.6145	0.66	0.82	0.51	0.28	0.611	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.618208	NA	NA	0.630814	0.305631	NA	0.58	NA	2.103086
1442	3	45772742	45772742	T	C	intronic	SACM1L	NA	NA	NA	intronic	ENSG00000211456	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs2531755	0.57	0.57	0.493	0.545527	0.6839	0.3839	0.5706	0.6498	0.411	0.7	0.34	0.58	0.62	0.5989	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.074901	NA	NA	0.614329	0.585416	ID=COSN166857;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.449	NA	2.102871
1442	12	6909442	6909442	T	C	intronic	CD4	NA	NA	NA	intronic	ENSG00000010610	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs2255301	0.63	0.63	0.65	0.571486	0.661	0.6161	0.5403	0.5643	0.4652	0.66	0.69	0.57	0.56	0.5998	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.453155	NA	NA	0.63686	0.599183	NA	0.717	NA	2.10234
1442	12	120995332	120995332	G	A	intronic	RNF10	NA	NA	NA	intronic	ENSG00000022840	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs2292681	0.56	0.56	0.538	0.523363	0.6262	0.749	0.6513	0.146	0.6043	0.63	0.76	0.63	0.18	0.6183	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.470726	NA	NA	0.653837	0.212892	NA	0.478	NA	2.101663
1442	4	173232944	173232944	G	T	intronic	GALNTL6	NA	NA	NA	intronic	ENSG00000174473	NA	NA	NA	NA	NA	4q34.1	NA	NA	NA	NA	rs168011	0.53	0.53	0.529	0.578874	0.6233	0.7827	0.6787	0.2269	0.728	0.55	0.71	0.63	0.22	0.64	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.084828	NA	NA	0.635116	0.286655	NA	0.391	NA	2.101584
1442	20	44422705	44422705	G	T	intronic	DNTTIP1	NA	NA	NA	intronic	ENSG00000101457	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs6032545	0.55	0.55	0.528	0.495008	0.6521	0.5367	0.7032	0.2995	0.407	0.68	0.53	0.68	0.3	0.6002	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.150564	NA	NA	0.646279	0.364503	NA	0.486	NA	2.101421
1442	9	137328286	137328286	G	A	intronic	RXRA	NA	NA	NA	intronic	ENSG00000186350	NA	NA	NA	NA	NA	9q34.2	NA	NA	NA	NA	rs1805343	0.54	0.54	0.542	0.483027	0.663	0.6677	0.5735	0.1876	0.4427	0.66	0.66	0.55	0.22	0.588	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.736003	NA	NA	0.648953	0.266455	NA	0.58	NA	2.100047
1442	3	37512646	37512646	T	C	intronic	ITGA9	NA	NA	NA	intronic	ENSG00000144668	NA	NA	NA	NA	NA	3p22.2	NA	NA	NA	NA	rs11713408	0.47	0.47	0.515	0.552716	0.665	0.4732	0.5504	0.5129	0.5746	0.54	0.4	0.54	0.4	0.6028	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.306168	NA	NA	0.632209	0.507717	ID=COSN166839;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	NA	NA	2.099991
1442	2	219353195	219353195	C	T	intronic	USP37	NA	NA	NA	intronic	ENSG00000135913	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs10932782	0.72	0.72	0.694	0.73722	0.6223	0.9048	0.6527	0.7436	0.7342	0.63	0.9	0.67	0.69	0.6612	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.380785	NA	NA	0.61686	0.731276	NA	0.63	NA	2.09964
1442	14	69695792	69695792	G	A	intronic	EXD2	NA	NA	NA	intronic	ENSG00000081177	NA	NA	NA	NA	NA	14q24.1	NA	NA	NA	NA	rs3742899	0.75	0.75	0.739	0.78095	0.5964	0.9385	0.7752	0.7821	0.8108	0.6	0.93	0.74	0.79	0.6931	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.767266	1.767266	NA	0.611628	0.771448	NA	0.732	NA	2.098872
1442	2	10051053	10051053	G	C	intronic	TAF1B	NA	NA	NA	intronic	ENSG00000115750	NA	NA	NA	NA	NA	2p25.1	NA	NA	NA	NA	rs10495576	0.48	0.48	0.47	0.43151	0.6551	0.4514	0.536	0.1309	0.5133	0.64	0.48	0.57	0.15	0.5743	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.94025	NA	NA	0.671744	0.210395	NA	0.536	NA	2.098856
1442	19	56249445	56249445	A	G	intronic	NLRP9	NA	NA	NA	intronic	ENSG00000185792	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs755804	0.61	0.61	0.608	0.652955	0.6113	0.6052	0.5951	0.6732	0.7587	0.6	0.56	0.59	0.7	0.6355	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.878309	NA	NA	0.654651	0.67113	NA	0.659	NA	2.098549
1442	2	152404294	152404294	C	T	intronic	NEB	NA	NA	NA	intronic	ENSG00000183091	NA	NA	NA	NA	NA	2q23.3	NA	NA	NA	NA	rs2288201	0.68	0.68	0.679	0.624002	0.6342	0.748	0.6859	0.5991	0.4755	0.62	0.77	0.67	0.66	0.6402	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.035454	NA	NA	0.627628	0.604545	NA	0.623	NA	2.097972
1442	3	37512647	37512647	G	C	intronic	ITGA9	NA	NA	NA	intronic	ENSG00000144668	NA	NA	NA	NA	NA	3p22.2	NA	NA	NA	NA	rs11709385	0.47	0.47	0.514	0.552117	0.665	0.4722	0.5504	0.5129	0.5726	0.54	0.39	0.54	0.4	0.6025	0.64	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.197719	NA	NA	0.635349	0.511348	ID=COSN166840;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	NA	NA	2.097151
1442	8	136561153	136561153	A	G	intronic	KHDRBS3	NA	NA	NA	intronic	ENSG00000131773	NA	NA	NA	NA	NA	8q24.23	NA	NA	NA	NA	rs11166602	0.6	0.6	0.555	0.586462	0.6292	0.7827	0.6297	0.3109	0.682	0.64	0.78	0.63	0.3	0.644	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.780126	NA	NA	0.630116	0.382433	NA	0.449	NA	2.096684
1442	18	48446953	48446953	C	T	intronic	ME2	NA	NA	NA	intronic	ENSG00000082212	NA	NA	NA	NA	NA	18q21.2	NA	NA	NA	NA	rs674210	0.68	0.68	0.667	0.729233	0.6093	0.6498	0.7709	0.8132	0.7914	0.62	0.63	0.75	0.79	0.6789	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.929561	NA	NA	0.616217	0.773058	NA	0.543	NA	2.095583
1443	8	2965209	2965209	A	G	intronic	CSMD1	NA	NA	NA	intronic	ENSG00000183117	NA	NA	NA	NA	NA	8p23.2	NA	NA	Name=9	NA	rs1531351	0.96	0.96	0.955	0.953474	0.9732	0.9464	0.9755	0.9228	0.9663	0.97	0.96	0.98	0.91	0.9662	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.05416	NA	NA	0.966854	0.916892	NA	0.971	NA	2.093746
1443	1	2409892	2409892	A	G	intronic	PLCH2	NA	NA	NA	intronic	ENSG00000149527	NA	NA	NA	NA	NA	1p36.32	NA	NA	NA	NA	rs12727342	0.69	0.69	0.661	0.707069	0.6292	0.7897	0.6671	0.7352	0.6922	0.61	0.78	0.67	0.71	0.6534	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.339824	NA	NA	0.626749	0.727231	NA	0.587	NA	2.090651
1443	3	37627112	37627112	T	C	intronic	ITGA9	NA	NA	NA	intronic	ENSG00000144668	NA	NA	NA	NA	NA	3p22.2	NA	NA	NA	NA	rs1155741	0.66	0.66	0.658	0.59365	0.6501	0.746	0.6254	0.6301	0.3067	0.66	0.74	0.61	0.62	0.6117	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.292056	NA	NA	0.647916	0.651256	NA	0.652	NA	2.090284
1443	4	62599289	62599289	G	A	intronic	LPHN3	NA	NA	NA	intronic	ENSG00000150471	NA	NA	NA	NA	NA	4q13.1	NA	NA	NA	NA	rs9312082	0.78	0.78	0.771	0.789936	0.6153	0.9454	0.768	0.8941	0.684	0.61	0.94	0.74	0.89	0.6933	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.330152	NA	NA	0.602526	0.859597	NA	0.638	NA	2.088874
1443	10	3155408	3155408	C	T	intronic	PFKP	NA	NA	NA	intronic	ENSG00000067057	NA	NA	NA	NA	NA	10p15.2	NA	NA	NA	NA	rs3816700	0.6	0.6	0.587	0.582268	0.6551	0.8125	0.5677	0.3351	0.6145	0.66	0.82	0.51	0.34	0.6256	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.333273	NA	NA	0.630728	0.350204	NA	0.609	NA	2.088572
1443	11	1218128	1218128	G	A	intergenic	MUC2,MUC5B	dist=113711;dist=26167	NA	NA	intergenic	ENSG00000215182,ENSG00000117983	dist=55767;dist=26168	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs28503875	0.42	0.42	0.405	0.478634	0.4046	0.3512	0.4409	0.5991	0.5501	0.41	0.28	0.41	0.6	0.4345	0.6	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.041737	NA	NA	0.407716	0.556911	NA	0.442	NA	2.0865174
1443	12	133311944	133311944	T	C	intronic	ANKLE2	NA	NA	NA	intronic	ENSG00000176915	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs10747081	0.68	0.68	0.68	0.646366	0.6531	0.7976	0.6916	0.5439	0.59	0.66	0.8	0.68	0.58	0.6488	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.800153	NA	NA	0.611779	0.592487	NA	0.667	NA	2.086321
1443	2	3599700	3599700	G	T	intronic	RNASEH1	NA	NA	NA	intronic	ENSG00000171865	NA	NA	NA	NA	NA	2p25.3	NA	NA	NA	NA	rs7563960	0.62	0.62	0.661	0.632588	0.66	0.4206	0.562	0.8805	0.5378	0.66	0.39	0.54	0.91	0.6131	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.040081	NA	NA	0.641163	0.857694	NA	0.754	NA	2.085737
1444	5	118532034	118532034	A	C	intronic	DMXL1	NA	NA	NA	intronic	ENSG00000172869	NA	NA	NA	NA	NA	5q23.1	NA	NA	NA	NA	rs6595178	0.71	0.71	0.71	0.710064	0.6064	0.9583	0.7075	0.5825	0.7352	0.61	0.97	0.67	0.61	0.682	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.169644	NA	NA	0.626628	0.605132	NA	0.601	NA	2.084972
1444	19	58485439	58485439	C	T	intronic	C19orf18	NA	NA	NA	intronic	ENSG00000177025	NA	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs257676	0.74	0.74	0.747	0.722843	0.6282	0.7192	0.6873	0.9758	0.5072	0.63	0.74	0.7	0.96	0.6532	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.0005	NA	NA	0.634419	0.923967	NA	0.746	NA	2.084181
1444	4	109762918	109762918	C	A	intronic	COL25A1	NA	NA	NA	intronic	ENSG00000188517	NA	NA	NA	NA	NA	4q25	NA	NA	NA	NA	rs11942576	0.62	0.62	0.599	0.672724	0.6292	0.6766	0.7176	0.5651	0.8272	0.64	0.62	0.69	0.54	0.6598	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.502533	NA	NA	0.628055	0.557003	NA	0.761	NA	2.082945
1444	15	28228644	28228644	G	A	intronic	OCA2	NA	NA	NA	intronic	ENSG00000104044	NA	NA	NA	NA	NA	15q13.1	NA	NA	NA	NA	rs12910433	0.37	0.37	0.303	0.321286	0.671	0.1538	0.4597	0.1097	0.3221	0.68	0.12	0.47	0.11	0.546	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.40879	NA	NA	0.700116	0.202451	NA	0.457	NA	2.082884
1444	17	74015590	74015590	C	T	intronic	EVPL	NA	NA	NA	intronic	ENSG00000167880	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs2244371	0.64	0.64	0.599	0.657947	0.6183	0.751	0.6297	0.5658	0.7474	0.63	0.74	0.62	0.54	0.6551	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.161262	2.161262	NA	0.644302	0.581934	NA	0.63	NA	2.082298
1444	3	183756808	183756808	G	A	UTR3	HTR3D	NM_182537:c.*45G>A,NM_001145143:c.*45G>A,NM_001163646:c.*45G>A	NA	NA	UTR3	ENSG00000186090	ENST00000334128:c.*45G>A,ENST00000382489:c.*45G>A,ENST00000453435:c.*45G>A	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs6789882	0.86	0.86	0.863	0.859824	0.7505	0.9821	0.83	0.9834	0.7004	0.73	0.99	0.8	0.97	0.7683	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.75523	NA	NA	0.73314	0.944167	NA	0.942	NA	2.0813934
1444	2	73828310	73828310	T	C	intronic	ALMS1	NA	NA	NA	intronic	ENSG00000116127	NA	NA	NA	NA	NA	2p13.1	NA	NA	NA	NA	rs1320374	0.56	0.56	0.488	0.552915	0.6551	0.7599	0.6974	0.1384	0.6922	0.64	0.72	0.69	0.14	0.6244	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.244924	NA	NA	0.639316	0.268681	NA	0.457	NA	2.081184
1444	17	72862705	72862705	G	A	intronic	FDXR	NA	NA	NA	intronic	ENSG00000161513	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs2070918	0.47	0.47	0.476	0.449481	0.659	0.2589	0.585	0.3472	0.4724	0.66	0.27	0.59	0.32	0.5912	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.335044	NA	NA	0.670312	0.385332	NA	0.529	NA	2.079488
1444	1	240421383	240421383	G	A	intronic	FMN2	NA	NA	NA	intronic	ENSG00000155816	NA	NA	NA	NA	NA	1q43	NA	NA	NA	NA	rs10926181	0.78	0.78	0.774	0.768171	0.6103	0.8403	0.7795	0.9539	0.5971	0.63	0.84	0.8	0.94	0.6819	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.33229	1.33229	NA	0.628698	0.90168	NA	0.725	NA	2.079102
1444	21	34635065	34635065	C	T	intronic	IFNAR2	NA	NA	NA	UTR3	ENSG00000159110	ENST00000404220:c.*44C>T	NA	NA	NA	NA	21q22.11	NA	NA	NA	NA	rs9984273	0.75	0.75	0.704	0.73722	0.6829	0.8978	0.8112	0.5719	0.7986	0.69	0.94	0.79	0.57	0.7268	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.343937	NA	NA	0.677956	0.614719	NA	0.688	NA	2.0790107
1444	1	26310394	26310394	A	G	intronic	PAFAH2	NA	NA	NA	intronic	ENSG00000158006	NA	NA	NA	NA	NA	1p36.11	NA	NA	NA	NA	rs2275102	0.57	0.57	0.53	0.546725	0.6561	0.7113	0.6902	0.1596	0.6861	0.69	0.69	0.68	0.18	0.6315	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.533272	NA	NA	0.633488	0.243759	NA	0.442	NA	2.078912
1444	1	231487017	231487017	T	C	intronic	SPRTN	NA	NA	NA	intronic	ENSG00000010072	NA	NA	NA	NA	NA	1q42.2	NA	NA	NA	NA	rs2474634	0.56	0.56	0.512	0.53135	0.663	0.5308	0.5216	0.407	0.5716	0.68	0.55	0.56	0.36	0.6108	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.473078	1.473078	NA	0.648256	0.438919	NA	0.225	NA	2.077944
1444	10	135352509	135352509	T	A	UTR3	CYP2E1	NM_000773:c.*41T>A	NA	NA	UTR3	ENSG00000130649	ENST00000463117:c.*41T>A,ENST00000252945:c.*41T>A	NA	NA	NA	NA	10q26.3	NA	NA	NA	NA	rs2480257	0.55	0.55	0.507	0.502995	0.7654	0.5258	0.6369	0.1293	0.6196	0.76	0.54	0.63	0.16	0.6987	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.130685	NA	NA	0.792791	0.208579	NA	0.457	NA	2.0764424
1444	1	108292260	108292260	A	G	intronic	VAV3	NA	NA	NA	intronic	ENSG00000134215	NA	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	rs6672483	0.75	0.75	0.74	0.77476	0.6133	0.9563	0.8098	0.6921	0.8405	0.63	0.98	0.78	0.65	0.7028	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.782654	NA	NA	0.608149	0.676431	NA	0.652	NA	2.075751
1444	17	74015595	74015595	T	C	intronic	EVPL	NA	NA	NA	intronic	ENSG00000167880	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs2244370	0.65	0.65	0.604	0.666733	0.6193	0.7579	0.6311	0.5923	0.7474	0.63	0.74	0.63	0.57	0.6603	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.527322	1.527322	NA	0.645116	0.613936	NA	0.645	NA	2.075284
1445	21	45837790	45837790	T	C	intronic	TRPM2	NA	NA	NA	ncRNA_intronic	ENSG00000230061	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs1785452	0.71	0.71	0.683	0.680911	0.7704	0.7778	0.7752	0.5061	0.6585	0.76	0.78	0.77	0.51	0.7326	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.375072	NA	NA	0.755525	0.554471	NA	0.536	NA	2.0748083
1445	1	145535921	145535921	T	C	intronic	ITGA10,NBPF10	NA	NA	NA	intronic	ENSG00000143127	NA	NA	NA	NA	NA	1q21.1	NA	NA	NA	NA	rs2274617	0.6	0.6	0.599	0.58766	0.6581	0.4454	0.5922	0.7141	0.4877	0.64	0.45	0.62	0.72	0.6091	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.275954	NA	NA	0.658721	0.686337	NA	0.565	NA	2.074079
1445	1	16372003	16372003	G	C	intronic	CLCNKB	NA	NA	NA	intronic	ENSG00000184908	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs6604910	0.6	0.6	0.58	0.566494	0.6571	0.7004	0.6902	0.2284	0.7045	0.67	0.74	0.69	0.27	0.626	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.383458	NA	NA	0.642907	0.283477	NA	0.536	NA	2.073993
1445	19	19453521	19453521	T	G	intronic	MAU2	NA	NA	NA	intronic	ENSG00000129933	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs2965191	0.58	0.58	0.507	0.524361	0.674	0.6677	0.5432	0.348	0.4479	0.68	0.66	0.56	0.33	0.6001	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.979859	NA	NA	0.651979	0.38348	NA	0.37	NA	2.073921
1445	8	86171786	86171786	T	C	intronic	CA13	NA	NA	NA	intronic	ENSG00000185015	NA	NA	NA	NA	NA	8q21.2	NA	NA	NA	NA	rs4739698	0.55	0.55	0.546	0.549121	0.662	0.4187	0.5259	0.559	0.5706	0.66	0.43	0.54	0.54	0.6119	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.01612	NA	NA	0.652674	0.570359	NA	0.558	NA	2.073426
1445	3	66432680	66432680	A	G	intronic	LRIG1	NA	NA	NA	intronic	ENSG00000144741,ENSG00000144749	NA	NA	NA	NA	NA	3p14.1	NA	NA	NA	NA	rs332371	0.77	0.77	0.772	0.776358	0.6421	0.8185	0.7147	0.9312	0.7055	0.66	0.81	0.72	0.93	0.6811	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.197909	NA	NA	0.604302	0.881298	NA	0.797	NA	2.072498
1445	5	156899290	156899290	T	C	intronic	NIPAL4	NA	NA	NA	intronic	ENSG00000135074,ENSG00000172548	NA	NA	NA	NA	NA	5q33.3	NA	NA	NA	NA	rs9313607	0.69	0.69	0.707	0.715455	0.6173	0.753	0.611	0.7935	0.7464	0.63	0.73	0.59	0.79	0.6699	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.584823	NA	NA	0.640481	0.797653	NA	0.667	NA	2.072319
1445	2	197171183	197171183	C	T	intronic	HECW2	NA	NA	NA	intronic	ENSG00000138411	NA	NA	NA	NA	NA	2q32.3	NA	NA	NA	NA	rs12468199	0.58	0.58	0.531	0.539337	0.671	0.7817	0.6945	0.1505	0.5695	0.67	0.78	0.63	0.17	0.6207	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.92367	NA	NA	0.636512	0.21153	NA	0.42	NA	2.071788
1445	21	46047971	46047971	T	C	UTR3	KRTAP10-9	NM_198690:c.*4T>C	NA	NA	UTR3	ENSG00000221837	ENST00000397911:c.*4T>C	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs463217	0.77	0.77	0.741	0.785743	0.7763	0.7103	0.7493	0.8714	0.7832	0.77	0.69	0.77	0.85	0.756	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.418593	NA	NA	0.730715	0.851526	NA	0.486	NA	2.0703184
1445	1	36887702	36887702	C	T	intronic	OSCP1	NA	NA	NA	intronic	ENSG00000116885	NA	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	rs2236565	0.67	0.67	0.675	0.706669	0.6282	0.6845	0.5288	0.8351	0.7628	0.63	0.63	0.6	0.83	0.6545	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.353384	NA	NA	0.647209	0.814571	NA	0.638	NA	2.070091
1445	15	75664570	75664570	A	T	intronic	SIN3A	NA	NA	NA	intronic	ENSG00000169375	NA	NA	NA	NA	NA	15q24.2	NA	NA	NA	NA	rs4886696	0.49	0.49	0.084	0.58726	0.7147	0.5565	0.7478	0.4175	0.6033	0.6	0.45	0.63	0.28	0.6939	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.80714	NA	NA	0.522378	0.244053	NA	NA	NA	2.069022
1445	19	19453560	19453560	C	A	intronic	MAU2	NA	NA	NA	intronic	ENSG00000129933	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs2301669	0.58	0.58	0.542	0.524361	0.674	0.6677	0.5432	0.348	0.4479	0.68	0.66	0.56	0.33	0.6001	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.914846	NA	NA	0.656891	0.398593	NA	0.5	NA	2.069009
1445	12	123794450	123794450	A	T	intronic	SBNO1	NA	NA	NA	intronic	ENSG00000139697	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs2277343	0.49	0.49	0.427	0.493011	0.664	0.6994	0.5836	0.0567	0.6299	0.62	0.65	0.56	0.07	0.618	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.542474	NA	NA	0.649557	0.130055	NA	0.384	NA	2.068443
1445	21	33371540	33371540	T	G	UTR3	HUNK	NM_014586:c.*43T>G	NA	NA	UTR3	ENSG00000142149	ENST00000270112:c.*43T>G	NA	NA	NA	NA	21q22.11	NA	NA	NA	NA	rs2070372	0.69	0.69	0.667	0.676118	0.7584	0.6667	0.696	0.5643	0.7382	0.77	0.69	0.65	0.57	0.7311	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.752094	NA	NA	0.775637	0.629748	NA	0.696	NA	2.0681964
1445	12	124268458	124268458	A	G	intronic	DNAH10	NA	NA	NA	intronic	ENSG00000197653	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs7303002	0.79	0.79	0.781	0.800719	0.6451	0.997	0.7262	0.829	0.773	0.64	1	0.73	0.82	0.6825	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.308727	NA	NA	0.604767	0.786201	NA	0.667	NA	2.067633
1445	17	73752999	73752999	C	G	intronic	ITGB4	NA	NA	NA	intronic	ENSG00000108479,ENSG00000132470	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs2249613	0.65	0.65	0.654	0.686102	0.6431	0.6567	0.5576	0.7837	0.7198	0.65	0.61	0.56	0.79	0.6484	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.146993	NA	NA	0.643239	0.719927	NA	0.681	NA	2.065261
1446	10	135352514	135352514	A	G	UTR3	CYP2E1	NM_000773:c.*46A>G	NA	NA	UTR3	ENSG00000130649	ENST00000463117:c.*46A>G,ENST00000252945:c.*46A>G	NA	NA	NA	NA	10q26.3	NA	NA	NA	NA	rs2480256	0.58	0.58	0.537	0.542332	0.7654	0.5248	0.6499	0.2731	0.6186	0.76	0.53	0.65	0.29	0.7101	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.974484	NA	NA	0.792907	0.316387	NA	0.514	NA	2.0649264
1446	19	43920443	43920443	C	G	intronic	TEX101	NA	NA	NA	intronic	ENSG00000131126	NA	NA	NA	NA	NA	19q13.31	NA	NA	NA	NA	rs3810375	0.71	0.71	0.7	0.712061	0.6352	0.7946	0.6095	0.7882	0.6759	0.64	0.78	0.63	0.79	0.66	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.216975	NA	NA	0.640233	0.75783	NA	0.696	NA	2.064567
1446	17	41063466	41063466	T	C	UTR3	G6PC	NM_001270397:c.*489T>C,NM_000151:c.*23T>C	NA	NA	UTR3	ENSG00000131482	ENST00000253801:c.*23T>C,ENST00000585489:c.*489T>C	NA	NA	NA	NA	17q21.31	NA	NA	NA	NA	rs2229611	0.65	0.65	0.646	0.638379	0.7744	0.4623	0.6182	0.671	0.6503	0.78	0.47	0.65	0.67	0.7124	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.039557	NA	NA	0.783096	0.698496	NA	0.674	NA	2.0634374
1446	4	69416353	69416353	T	A	intronic	UGT2B17	NA	NA	NA	intronic	ENSG00000197888	NA	NA	NA	NA	NA	4q13.2	NA	NA	NA	NA	rs62316988	0.45	0.45	0.413	0.530351	0.7217	0.7748	0.4971	0.1422	0.6299	0.66	0.44	0.48	0.13	0.5731	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.040048	NA	NA	0.642306	0.180642	NA	0.239	NA	2.062894
1446	4	158242540	158242540	G	A	intronic	GRIA2	NA	NA	NA	intronic	ENSG00000120251	NA	NA	NA	NA	NA	4q32.1	NA	NA	NA	NA	rs4475186	0.67	0.67	0.63	0.659345	0.6252	0.7897	0.7522	0.4841	0.7311	0.64	0.82	0.73	0.5	0.6664	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.363497	NA	NA	0.645615	0.511126	NA	0.623	NA	2.062785
1446	4	141555062	141555062	G	T	intronic	TBC1D9	NA	NA	NA	intronic	ENSG00000109436	NA	NA	NA	NA	NA	4q31.21	NA	NA	NA	NA	rs6851737	0.69	0.69	0.661	0.698882	0.666	0.6319	0.7003	0.7648	0.7117	0.66	0.61	0.73	0.78	0.6539	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.97503	NA	NA	0.6174	0.727501	NA	0.732	NA	2.0627
1446	11	828784	828784	A	G	intronic	EFCAB4A	NA	NA	NA	ncRNA_intronic	ENSG00000255108	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs28507876	0.85	0.85	0.835	0.785144	0.7465	0.9107	0.8271	0.9062	0.502	0.76	0.93	0.82	0.91	0.7683	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.19463	NA	NA	0.757299	0.892054	NA	0.87	NA	2.0612343
1446	12	125453235	125453235	C	A	intronic	DHX37	NA	NA	NA	intronic	ENSG00000150990	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs11057940	0.74	0.74	0.746	0.727436	0.6292	0.8393	0.6297	0.7988	0.6861	0.64	0.86	0.65	0.8	0.6815	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.781551	NA	NA	0.628372	0.770086	NA	0.732	NA	2.060928
1446	17	67160186	67160186	T	C	intronic	ABCA10	NA	NA	NA	intronic	ENSG00000154263	NA	NA	NA	NA	NA	17q24.3	NA	NA	NA	NA	rs7208382	0.46	0.46	0.437	0.488219	0.665	0.3631	0.5648	0.3011	0.6339	0.66	0.31	0.54	0.29	0.6134	0.66	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.808511	NA	NA	0.660802	0.38788	NA	0.478	NA	2.060798
1446	4	8221058	8221058	G	A	intronic	SH3TC1	NA	NA	NA	intronic	ENSG00000125089	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs4696782	0.7	0.7	0.698	0.684305	0.6402	0.7808	0.7421	0.6513	0.6339	0.65	0.82	0.7	0.66	0.6783	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.419177	NA	NA	0.620754	0.644253	NA	0.587	NA	2.060746
1446	2	37010574	37010574	G	A	intronic	VIT	NA	NA	NA	intronic	ENSG00000205221	NA	NA	NA	NA	NA	2p22.2	NA	NA	NA	NA	rs3821147	0.57	0.57	0.532	0.496605	0.669	0.7778	0.7104	0.0946	0.4213	0.66	0.79	0.7	0.1	0.609	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.406226	4.406226	NA	0.661977	0.181798	NA	0.514	NA	2.060023
1446	5	157164889	157164889	T	C	intronic	THG1L	NA	NA	NA	intronic	ENSG00000113272	NA	NA	NA	NA	NA	5q33.3	NA	NA	NA	NA	rs2270813	0.64	0.64	0.645	0.653355	0.6471	0.8185	0.5043	0.5605	0.7209	0.66	0.8	0.54	0.5	0.6462	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.798029	NA	NA	0.647127	0.559946	NA	0.514	NA	2.059573
1446	14	100813077	100813077	T	C	intronic	WARS	NA	NA	NA	ncRNA_intronic	ENSG00000258666	NA	NA	NA	NA	NA	14q32.2	NA	NA	NA	NA	rs941923	0.71	0.71	0.652	0.697085	0.7734	0.755	0.8372	0.444	0.8016	0.78	0.77	0.84	0.44	0.7513	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.625738	NA	NA	0.749419	0.501816	NA	0.601	NA	2.0592143
1446	14	57101682	57101682	A	G	intronic	TMEM260	NA	NA	NA	ncRNA_intronic	ENSG00000258428	NA	NA	NA	NA	NA	14q22.3	NA	NA	NA	NA	rs913742	0.7	0.7	0.689	0.682308	0.7565	0.7143	0.7867	0.528	0.7076	0.75	0.75	0.74	0.54	0.7476	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.75395	NA	NA	0.771512	0.579664	NA	0.696	NA	2.0577213
1446	5	101726648	101726648	C	A	intronic	SLCO6A1	NA	NA	NA	intronic	ENSG00000205359	NA	NA	NA	NA	NA	5q21.1	NA	NA	NA	NA	rs6874612	0.57	0.57	0.541	0.585463	0.6531	0.4613	0.5331	0.6672	0.5706	0.62	0.49	0.54	0.61	0.6396	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.125057	NA	NA	0.649721	0.650023	NA	0.522	NA	2.057579
1446	1	204006597	204006597	G	A	ncRNA_exonic	LINC00303	NA	NA	NA	ncRNA_exonic	ENSG00000176754	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs4951039	0.88	0.88	0.879	0.864417	0.8688	0.755	0.9409	0.9372	0.82	0.88	0.78	0.94	0.94	0.8688	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.457274	NA	1	0.873124	0.938051	ID=COSN163406;OCCURENCE=1(breast)	0.761	NA	2.0559426
1446	5	145197411	145197411	C	T	intronic	PRELID2	NA	NA	NA	intronic	ENSG00000186314	NA	NA	NA	NA	NA	5q32	NA	NA	NA	NA	rs6870210	0.45	0.45	0.409	0.424321	0.6879	0.2798	0.5692	0.1944	0.5102	0.69	0.27	0.58	0.2	0.5789	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.524002	NA	NA	0.677442	0.268724	NA	0.514	NA	2.055758
1446	13	101289998	101289998	C	A	intronic	TMTC4	NA	NA	NA	intronic	ENSG00000125247	NA	NA	NA	NA	NA	13q32.3	NA	NA	NA	NA	rs7985718	0.7	0.7	0.67	0.685703	0.6481	0.9831	0.6124	0.4871	0.7382	0.64	0.99	0.62	0.52	0.6709	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.049667	NA	NA	0.625581	0.515433	NA	0.652	NA	2.055419
1447	10	118359548	118359548	T	C	intronic	PNLIPRP1	NA	NA	NA	intronic	ENSG00000187021	NA	NA	NA	NA	NA	10q25.3	NA	NA	NA	NA	rs3816355	0.67	0.67	0.66	0.64397	0.6412	0.9444	0.6081	0.4251	0.6585	0.65	0.94	0.6	0.45	0.6626	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.401703	1.401703	NA	0.641744	0.455742	NA	0.609	NA	2.054456
1447	19	41863777	41863777	A	C	intronic	B9D2	NA	NA	NA	intronic	ENSG00000123810,ENSG00000142046	NA	NA	NA	NA	NA	19q13.2	NA	NA	NA	NA	rs11668109	0.52	0.52	0.529	0.52476	0.664	0.1528	0.4971	0.7126	0.5307	0.67	0.16	0.55	0.69	0.6073	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.129595	NA	NA	0.674302	0.71153	NA	0.601	NA	2.054398
1447	11	1158073	1158073	T	C	intergenic	MUC2,MUC5B	dist=53656;dist=86222	NA	NA	exonic	ENSG00000215182	NA	synonymous SNV	ENSG00000215182:ENST00000534821:exon9:c.T1053C:p.C351C,ENSG00000215182:ENST00000356191:exon14:c.T1044C:p.C348C	NA	NA	11p15.5	NA	NA	NA	NA	rs28691231	0.88	0.88	0.873	0.891973	0.7992	0.997	0.9035	0.8389	0.9427	0.8	1	0.88	0.84	0.8547	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.166608	NA	NA	0.792358	0.832377	NA	0.877	NA	2.053742
1447	20	2597978	2597978	G	A	intronic	TMC2	NA	NA	NA	intronic	ENSG00000149488	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs4815428	0.52	0.52	0.507	0.489816	0.662	0.5575	0.621	0.1513	0.6074	0.65	0.56	0.63	0.2	0.6184	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.231919	NA	0.01	0.666512	0.231276	NA	0.406	NA	2.053088
1447	12	125456004	125456004	C	A	intronic	DHX37	NA	NA	NA	intronic	ENSG00000150990	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs4542508	0.73	0.73	0.733	0.722644	0.6312	0.8403	0.6254	0.7791	0.6881	0.64	0.86	0.65	0.78	0.6882	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.473951	NA	NA	0.62785	0.747617	NA	0.71	NA	2.05275
1447	12	6458084	6458084	C	T	intronic	SCNN1A	NA	NA	NA	intronic	ENSG00000111319	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs3764875	0.68	0.68	0.645	0.653155	0.6431	0.8016	0.7464	0.5401	0.5971	0.64	0.81	0.7	0.59	0.6547	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.459682	NA	NA	0.650233	0.5665	NA	0.652	NA	2.051967
1447	3	45772772	45772772	G	A	intronic	SACM1L	NA	NA	NA	intronic	ENSG00000211456	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs2673055	0.57	0.57	0.546	0.545527	0.6839	0.3839	0.5706	0.6498	0.411	0.7	0.34	0.58	0.62	0.6029	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.605828	NA	NA	0.663372	0.627099	ID=COSN166859;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.507	NA	2.049828
1447	19	33349488	33349488	T	C	intronic	SLC7A9	NA	NA	NA	intronic	ENSG00000021488	NA	NA	NA	NA	NA	19q13.11	NA	NA	NA	NA	rs2287879	0.76	0.76	0.813	0.767772	0.668	0.8512	0.536	0.9592	0.6902	0.66	0.87	0.57	0.94	0.663	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.83678	NA	NA	0.619535	0.903541	NA	0.775	NA	2.049465
1447	3	142567327	142567327	G	A	intronic	PCOLCE2	NA	NA	NA	intronic	ENSG00000163710	NA	NA	NA	NA	NA	3q23	NA	NA	NA	NA	rs893883	0.56	0.56	0.554	0.527756	0.6958	0.3304	0.4899	0.6218	0.4581	0.69	0.34	0.53	0.62	0.5927	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.316397	1.316397	NA	0.663526	0.617113	NA	0.572	NA	2.047974
1447	8	141034189	141034189	A	T	intronic	TRAPPC9	NA	NA	NA	intronic	ENSG00000167632	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs9792174	0.59	0.59	0.52	0.538339	0.6809	0.5982	0.5375	0.4039	0.5123	0.68	0.62	0.59	0.43	0.6308	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.052798	NA	NA	0.640465	0.437131	NA	0.493	NA	2.047835
1447	1	3782608	3782608	C	T	intronic	DFFB	NA	NA	NA	intronic	ENSG00000169598	NA	NA	NA	NA	NA	1p36.32	NA	NA	NA	NA	rs10909809	0.47	0.47	0.455	0.434305	0.6511	0.3095	0.5346	0.2693	0.4918	0.65	0.33	0.52	0.32	0.5975	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.670815	NA	NA	0.703745	0.373757	NA	0.471	NA	2.047655
1447	15	80472431	80472431	C	A	intronic	FAH	NA	NA	NA	intronic	ENSG00000103876	NA	NA	NA	NA	NA	15q25.1	NA	NA	NA	NA	rs2043691	0.68	0.68	0.711	0.670327	0.668	0.8542	0.5317	0.5469	0.7485	0.68	0.86	0.58	0.57	0.6557	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.330983	NA	NA	0.628721	0.526328	NA	0.659	NA	2.047579
1447	19	8528310	8528310	A	G	intronic	HNRNPM	NA	NA	NA	intronic	ENSG00000099783	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs8102587	0.89	0.89	0.861	0.86861	0.9761	0.9812	0.9409	0.5756	0.9867	0.98	0.99	0.96	0.57	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.342329	NA	NA	0.976744	0.598266	NA	0.833	NA	2.047156
1447	19	8551852	8551852	A	G	intronic	HNRNPM	NA	NA	NA	intronic	ENSG00000099783	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs11669139	0.9	0.9	0.868	0.882788	0.9761	0.9812	0.9481	0.6256	0.9867	0.98	0.99	0.96	0.61	NA	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.811529	NA	NA	0.977373	0.658237	NA	0.855	NA	2.046527
1448	3	45761115	45761115	G	C	intronic	SACM1L	NA	NA	NA	intronic	ENSG00000211456	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs2064062	0.57	0.57	0.571	0.545527	0.6839	0.3839	0.5706	0.6498	0.411	0.7	0.34	0.58	0.62	0.6079	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.252105	NA	NA	0.663643	0.628461	ID=COSN166854;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.507	NA	2.044557
1448	3	97887495	97887495	C	G	upstream	OR5H15	NA	NA	NA	upstream	ENSG00000233412	NA	NA	NA	NA	NA	3q11.2	NA	NA	NA	NA	rs10212222	0.63	0.63	0.64	0.641573	0.5388	0.5079	0.5922	0.8986	0.5726	0.54	0.56	0.54	0.89	0.5611	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.96413	NA	NA	0.523189	0.831935	NA	0.558	NA	2.0435776
1448	14	21960408	21960408	A	G	intronic	TOX4	NA	NA	NA	intronic	ENSG00000092203	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs3737050	0.66	0.66	0.663	0.660942	0.6571	0.7024	0.6268	0.6755	0.6268	0.65	0.7	0.65	0.62	0.6446	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.826571	NA	NA	0.654868	0.701038	NA	0.732	NA	2.043432
1448	21	47616071	47616071	G	C	intronic	LSS	NA	NA	NA	intronic	ENSG00000160285	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs7282841	0.62	0.62	0.624	0.598842	0.673	0.6835	0.5231	0.5424	0.5654	0.68	0.72	0.53	0.5	0.6268	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.061088	NA	NA	0.65686	0.550159	NA	0.703	NA	2.04334
1448	19	2389958	2389958	T	A	intronic	TMPRSS9	NA	NA	NA	intronic	ENSG00000178297	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs891176	0.58	0.58	0.586	0.584065	0.668	0.4474	0.4352	0.6543	0.6493	0.66	0.44	0.5	0.67	0.6205	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.06041	NA	NA	0.669535	0.612574	NA	0.529	NA	2.041965
1448	17	19609947	19609947	C	G	intronic	SLC47A2	NA	NA	NA	intronic	ENSG00000180638	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs12942065	0.74	0.74	0.73	0.759185	0.6223	0.9544	0.7233	0.7209	0.7761	0.62	0.94	0.7	0.71	0.6932	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.78896	NA	NA	0.642907	0.70404	NA	0.717	NA	2.041593
1448	9	130289615	130289615	C	G	intronic	FAM129B	NA	NA	NA	intronic	ENSG00000136830	NA	NA	NA	NA	NA	9q33.3	NA	NA	NA	NA	rs2243558	0.59	0.59	0.532	0.577276	0.6819	0.4028	0.6873	0.5923	0.5511	0.69	0.41	0.67	0.6	0.6307	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.05346	NA	NA	0.645814	0.632547	NA	0.565	NA	2.041586
1448	19	2389954	2389954	G	A	intronic	TMPRSS9	NA	NA	NA	intronic	ENSG00000178297	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs891175	0.58	0.58	0.596	0.584065	0.668	0.4474	0.4352	0.6543	0.6493	0.66	0.44	0.5	0.67	0.6208	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.966088	NA	NA	0.669651	0.612801	NA	0.529	NA	2.041549
1448	17	48276971	48276971	G	C	intronic	COL1A1	NA	NA	NA	intronic	ENSG00000108821	NA	NA	NA	NA	NA	17q21.33	NA	NA	NA	NA	rs2256835	0.53	0.53	0.513	0.518171	0.662	0.6478	0.5303	0.2216	0.6288	0.67	0.62	0.52	0.23	0.6187	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.716602	1.716602	NA	0.679302	0.306627	NA	0.449	NA	2.039998
1448	7	92027187	92027187	A	G	intronic	ANKIB1	NA	NA	NA	intronic	ENSG00000001629	NA	NA	NA	NA	NA	7q21.2	NA	NA	NA	NA	rs38793	0.71	0.71	0.715	0.727236	0.6491	0.8333	0.6643	0.761	0.6973	0.65	0.82	0.64	0.73	0.6767	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.026305	2.026305	NA	0.63462	0.733183	NA	0.645	NA	2.03958
1448	6	109982160	109982160	C	T	intronic	AK9	NA	NA	NA	intronic	ENSG00000155085	NA	NA	NA	NA	NA	6q21	NA	NA	NA	NA	rs2016207	0.63	0.63	0.595	0.652157	0.6431	0.8472	0.7305	0.3238	0.8487	0.65	0.85	0.69	0.32	0.6786	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.662636	NA	NA	0.638875	0.353714	NA	0.536	NA	2.039425
1448	5	101795490	101795490	A	G	intronic	SLCO6A1	NA	NA	NA	intronic	ENSG00000205359	NA	NA	NA	NA	NA	5q21.1	NA	NA	NA	NA	rs11746217	0.6	0.6	0.558	0.586462	0.6551	0.4613	0.5331	0.6672	0.5736	0.65	0.5	0.57	0.65	0.641	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.451068	NA	NA	0.664535	0.669995	NA	0.565	NA	2.039365
1448	17	19319015	19319015	C	T	intronic	RNF112	NA	NA	NA	intronic	ENSG00000128482	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs1295329	0.39	0.39	0.383	0.327276	0.7217	0.12	0.4813	0.0575	0.3906	0.72	0.13	0.55	0.05	0.547	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.66806	NA	NA	0.693146	0.189528	NA	0.42	NA	2.038154
1448	17	81050982	81050982	G	C	intronic	METRNL	NA	NA	NA	intronic	ENSG00000176845	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs7501742	0.56	0.56	0.594	0.565495	0.665	0.4415	0.5159	0.556	0.6391	0.66	0.39	0.56	0.6	0.624	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.04157	NA	NA	0.67318	0.567635	NA	0.558	NA	2.03782
1448	2	15616030	15616030	C	T	intronic	NBAS	NA	NA	NA	intronic	ENSG00000151779	NA	NA	NA	NA	NA	2p24.3	NA	NA	NA	NA	rs1990756	0.49	0.49	0.479	0.492013	0.6909	0.1696	0.6009	0.5174	0.5082	0.67	0.19	0.59	0.47	0.5908	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.922086	NA	NA	0.681903	0.541307	NA	0.645	NA	2.036397
1448	2	207833848	207833848	A	G	intronic	CPO	NA	NA	NA	intronic	ENSG00000144410	NA	NA	NA	NA	NA	2q33.3	NA	NA	NA	NA	rs7582092	0.63	0.63	0.669	0.623203	0.667	0.5635	0.4539	0.789	0.5358	0.66	0.58	0.49	0.75	0.6246	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.178355	NA	NA	0.672209	0.753972	NA	0.739	NA	2.036191
1448	10	98319367	98319367	A	T	intronic	TM9SF3	NA	NA	NA	intronic	ENSG00000077147	NA	NA	NA	NA	NA	10q24.1	NA	NA	NA	NA	rs3818389	0.63	0.63	0.621	0.600839	0.6461	0.8304	0.5389	0.3411	0.7127	0.66	0.87	0.57	0.35	0.6564	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.74224	NA	NA	0.66147	0.391136	NA	0.616	NA	2.03603
1449	2	15616013	15616013	C	G	intronic	NBAS	NA	NA	NA	intronic	ENSG00000151779	NA	NA	NA	NA	NA	2p24.3	NA	NA	NA	NA	rs1990755	0.49	0.49	0.477	0.492812	0.6909	0.1696	0.6009	0.5174	0.5123	0.67	0.19	0.59	0.47	0.5941	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.398322	NA	NA	0.682442	0.541988	NA	0.652	NA	2.032558
1449	12	52711450	52711450	T	C	intronic	KRT83	NA	NA	NA	intronic	ENSG00000170523	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs2248619	0.71	0.71	0.72	0.717851	0.6441	0.6776	0.585	0.8956	0.6892	0.64	0.67	0.64	0.9	0.6663	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.969571	NA	NA	0.657442	0.874716	NA	0.63	NA	2.032158
1449	2	141709419	141709419	T	G	intronic	LRP1B	NA	NA	NA	intronic	ENSG00000168702	NA	NA	NA	NA	NA	2q22.1	NA	NA	NA	NA	rs1429348	0.55	0.55	0.518	0.536542	0.6441	0.6587	0.6326	0.2776	0.5818	0.65	0.65	0.59	0.26	0.6465	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.236998	3.236998	NA	0.678256	0.353155	NA	0.58	NA	2.031144
1449	2	65200618	65200618	C	A	intergenic	LOC400958,SLC1A4	dist=41037;dist=14961	NA	NA	intergenic	ENSG00000227394,ENSG00000115902	dist=12850;dist=15006	NA	NA	NA	NA	2p14	NA	NA	NA	NA	rs4671636	0.51	0.51	0.516	0.539137	0.4165	0.4524	0.4841	0.7156	0.5552	0.43	0.45	0.46	0.73	0.4753	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.561155	NA	NA	0.412104	0.656393	NA	0.507	NA	2.0294294
1449	10	98287261	98287261	G	C	intronic	TM9SF3	NA	NA	NA	intronic	ENSG00000077147	NA	NA	NA	NA	NA	10q24.1	NA	NA	NA	NA	rs3789957	0.63	0.63	0.604	0.601038	0.6471	0.8304	0.5403	0.3411	0.7117	0.66	0.87	0.58	0.35	0.6584	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.915951	NA	NA	0.665193	0.392322	NA	0.63	NA	2.029307
1449	2	234091158	234091158	T	C	intronic	INPP5D	NA	NA	NA	intronic	ENSG00000168918	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs4571051	0.8	0.8	0.807	0.830272	0.6451	0.9683	0.7277	0.9508	0.7883	0.63	0.96	0.73	0.95	0.7051	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.097455	NA	NA	0.621429	0.903781	NA	0.746	NA	2.028371
1449	3	53814197	53814197	G	A	intronic	CACNA1D	NA	NA	NA	intronic	ENSG00000157388	NA	NA	NA	NA	NA	3p21.1	NA	NA	NA	NA	rs1829423	0.6	0.6	0.577	0.550319	0.674	0.4435	0.6095	0.6339	0.3783	0.69	0.42	0.62	0.65	0.6217	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.681438	NA	NA	0.678256	0.652065	NA	0.601	NA	2.026044
1449	10	13275676	13275676	T	C	intronic	UCMA	NA	NA	NA	intronic	ENSG00000165623	NA	NA	NA	NA	NA	10p13	NA	NA	NA	NA	rs3829926	0.58	0.58	0.527	0.535144	0.6561	0.5357	0.7032	0.4183	0.4489	0.65	0.54	0.74	0.42	0.6268	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.802004	NA	NA	0.692093	0.467317	NA	0.391	NA	2.025007
1450	1	1854109	1854109	A	G	intergenic	TMEM52,KIAA1751	dist=3369;dist=30643	NA	NA	intronic	ENSG00000142609	NA	NA	NA	NA	NA	1p36.33	NA	NA	NA	NA	rs2803348	0.57	0.57	0.542	0.598842	0.5368	0.6359	0.6196	0.562	0.6595	0.54	0.6	0.61	0.55	0.5677	0.61	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.756475	NA	NA	0.537558	0.520881	ID=COSM146378;OCCURENCE=1(breast),1(stomach)	0.449	NA	2.0246087
1450	9	35060302	35060302	T	C	intronic	VCP	NA	NA	NA	intronic	ENSG00000165280	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs684562	0.43	0.43	0.381	0.408746	0.6839	0.0804	0.7032	0.2088	0.5256	0.69	0.09	0.69	0.23	0.5865	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.658769	NA	NA	0.705814	0.281434	NA	0.471	NA	2.023786
1450	15	75664571	75664571	A	T	intronic	SIN3A	NA	NA	NA	intronic	ENSG00000169375	NA	NA	NA	NA	NA	15q24.2	NA	NA	NA	NA	rs56395816	0.54	0.54	0.16	0.627995	0.7177	0.6587	0.7666	0.4796	0.6063	0.6	0.55	0.65	0.34	0.7149	0.65	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.179178	NA	NA	0.543939	0.325858	NA	0.014	NA	2.023461
1450	22	25714218	25714218	A	T	upstream	IGLL3P	NA	NA	NA	upstream	ENSG00000206066	NA	NA	NA	NA	NA	22q11.23	NA	NA	NA	NA	rs2072869	0.39	0.39	0.305	0.397364	0.5785	0.4107	0.2853	0.1346	0.6319	0.57	0.37	0.35	0.14	0.4971	0.57	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.755205	NA	NA	0.56814	0.203451	NA	0.254	NA	2.0229266
1450	7	22857589	22857589	T	C	intronic	TOMM7	NA	NA	NA	intronic	ENSG00000196683	NA	NA	NA	NA	NA	7p15.3	NA	NA	NA	NA	rs7782015	0.78	0.78	0.804	0.784545	0.6441	0.9901	0.6138	0.8638	0.7311	0.66	0.99	0.63	0.84	0.6887	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.757492	NA	NA	0.645465	0.817522	NA	0.848	NA	2.021735
1450	14	22279809	22279809	A	C	intergenic	OR4E2,DAD1	dist=145571;dist=753998	NA	NA	intronic	ENSG00000211783	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs2856411	0.46	0.46	0.442	0.415535	0.5746	0.3363	0.4308	0.3608	0.3967	0.58	0.36	0.46	0.38	0.5089	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.749584	NA	NA	0.563661	0.372416	NA	0.449	NA	2.0195057
1450	2	15676686	15676686	G	A	intronic	NBAS	NA	NA	NA	intronic	ENSG00000151779	NA	NA	NA	NA	NA	2p24.3	NA	NA	NA	NA	rs10208972	0.54	0.54	0.516	0.538339	0.6918	0.2202	0.6254	0.621	0.5348	0.67	0.25	0.63	0.6	0.6076	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.345172	NA	NA	0.681279	0.636591	NA	0.696	NA	2.019321
1450	11	1098637	1098637	A	G	intronic	MUC2	NA	NA	NA	intronic	ENSG00000198788	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs12418069	0.79	0.79	0.782	0.813299	0.6461	0.9911	0.7795	0.7602	0.8978	0.65	0.99	0.75	0.79	0.7099	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.116667	NA	NA	0.625745	0.747218	NA	0.746	NA	2.018255
1450	2	15618339	15618339	G	A	intronic	NBAS	NA	NA	NA	intronic	ENSG00000151779	NA	NA	NA	NA	NA	2p24.3	NA	NA	NA	NA	rs1125534	0.53	0.53	0.53	0.527556	0.6938	0.2222	0.6254	0.5772	0.5348	0.67	0.25	0.64	0.57	0.6066	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.144238	NA	NA	0.683488	0.592189	NA	0.681	NA	2.016112
1450	1	157567751	157567751	A	G	UTR5	FCRL4	NM_031282:c.-17T>C	NA	NA	UTR5	ENSG00000163518	ENST00000271532:c.-17T>C	NA	NA	NA	NA	1q23.1	NA	NA	NA	NA	rs1361889	0.8	0.8	0.791	0.796126	0.7823	0.9008	0.8501	0.6694	0.8354	0.77	0.91	0.83	0.72	0.7766	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.482665	NA	NA	0.758953	0.694054	NA	0.739	NA	2.0154804
1450	11	120097498	120097498	T	C	intronic	OAF	NA	NA	NA	intronic	ENSG00000184232	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs873059	0.4	0.4	0.368	0.328674	0.7117	0.006	0.4366	0.2693	0.271	0.72	0.01	0.52	0.27	0.553	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.886284	NA	NA	0.719884	0.332955	NA	0.435	NA	2.015416
1450	3	182858287	182858287	C	T	intronic	LAMP3	NA	NA	NA	intronic	ENSG00000078081	NA	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs522235	0.53	0.53	0.502	0.515575	0.674	0.4722	0.4827	0.3517	0.6421	0.66	0.5	0.5	0.38	0.621	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.385778	NA	NA	0.689651	0.422152	ID=COSN167096;OCCURENCE=1(large_intestine)	0.486	NA	2.015349
1450	6	31132649	31132649	A	C	intronic	POU5F1	NA	NA	NA	intronic	ENSG00000137310,ENSG00000204531	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs2394882	0.68	0.68	0.67	0.68151	0.668	0.6419	0.67	0.8033	0.5798	0.66	0.59	0.68	0.81	0.6586	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.499847	NA	NA	0.658361	0.788079	NA	0.703	NA	2.015039
1451	18	61326597	61326597	A	C	intronic	SERPINB3	NA	NA	NA	intronic	ENSG00000057149	NA	NA	NA	NA	NA	18q21.33	NA	NA	NA	NA	rs8085479	0.99	0.99	0.99	0.993011	1	1	0.9942	0.9773	0.999	1	1	1	0.96	0.9853	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.148944	NA	NA	NA	NA	NA	0.993	NA	2.0147
1451	18	61326609	61326609	T	G	intronic	SERPINB3	NA	NA	NA	intronic	ENSG00000057149	NA	NA	NA	NA	NA	18q21.33	NA	NA	NA	NA	rs8089201	0.99	0.99	0.99	0.993411	1	0.996	0.9971	0.9811	0.998	1	1	1	0.97	0.9855	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.134717	NA	NA	NA	NA	NA	0.964	NA	2.0145
1451	18	61326602	61326602	A	G	intronic	SERPINB3	NA	NA	NA	intronic	ENSG00000057149	NA	NA	NA	NA	NA	18q21.33	NA	NA	NA	NA	rs8085482	0.99	0.99	0.99	0.994409	1	1	0.9957	0.9818	0.999	1	1	1	0.98	0.9858	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.692615	NA	NA	NA	NA	NA	1	NA	2.0142
1451	3	53212574	53212574	C	G	intronic	PRKCD	NA	NA	NA	intronic	ENSG00000163932	NA	NA	NA	NA	NA	3p21.1	NA	NA	NA	NA	rs2306571	0.62	0.62	0.583	0.565895	0.6779	0.7341	0.6484	0.3116	0.5624	0.68	0.77	0.68	0.32	0.6601	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.600756	NA	NA	0.647907	0.36473	NA	0.623	NA	2.014093
1451	11	62489267	62489267	C	T	ncRNA_intronic	HNRNPUL2-BSCL2	NA	NA	NA	intronic	ENSG00000214753,ENSG00000234857	NA	NA	NA	NA	NA	11q12.3	NA	NA	NA	NA	rs496032	0.74	0.74	0.737	0.747404	0.7873	0.7619	0.8156	0.6483	0.7771	0.78	0.77	0.78	0.63	0.7724	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.675648	NA	NA	0.759664	0.675783	NA	0.674	NA	2.0139693
1451	2	15519992	15519992	G	T	intronic	NBAS	NA	NA	NA	intronic	ENSG00000151779	NA	NA	NA	NA	NA	2p24.3	NA	NA	NA	NA	rs2058866	0.52	0.52	0.508	0.517372	0.6938	0.2232	0.6254	0.5378	0.5348	0.67	0.26	0.63	0.52	0.6086	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.214687	NA	NA	0.684272	0.561535	NA	0.674	NA	2.013328
1451	13	52663491	52663491	A	G	intronic	NEK5	NA	NA	NA	intronic	ENSG00000197168	NA	NA	NA	NA	NA	13q14.3	NA	NA	NA	NA	rs9535861	0.57	0.57	0.533	0.506789	0.7028	0.6121	0.634	0.2526	0.4499	0.69	0.59	0.66	0.28	0.6086	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.395772	NA	NA	0.675547	0.314714	NA	0.464	NA	2.013053
1451	6	47522357	47522357	G	A	intronic	CD2AP	NA	NA	NA	intronic	ENSG00000198087	NA	NA	NA	NA	NA	6p12.3	NA	NA	NA	NA	rs9473132	0.5	0.5	0.494	0.521965	0.6859	0.2808	0.4496	0.4955	0.6892	0.68	0.26	0.49	0.49	0.6156	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.344673	NA	NA	0.68593	0.527236	NA	0.616	NA	2.01257
1451	22	38251686	38251686	T	C	intronic	EIF3L	NA	NA	NA	intronic	ENSG00000100129	NA	NA	NA	NA	NA	22q13.1	NA	NA	NA	NA	rs2157472	0.78	0.78	0.798	0.791134	0.6382	0.879	0.6686	0.9546	0.7239	0.64	0.89	0.65	0.95	0.6989	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.46181	NA	NA	0.650349	0.912619	NA	0.754	NA	2.012551
1451	11	24784862	24784862	A	T	intronic	LUZP2	NA	NA	NA	intronic	ENSG00000187398	NA	NA	NA	NA	NA	11p14.3	NA	NA	NA	NA	rs2716532	0.6	0.6	0.596	0.594848	0.671	0.4643	0.5476	0.6566	0.6012	0.67	0.49	0.53	0.67	0.6418	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.198694	NA	NA	0.674783	0.641947	NA	0.522	NA	2.012417
1451	13	41525586	41525586	A	G	intronic	ELF1	NA	NA	NA	intronic	ENSG00000120690	NA	NA	NA	NA	NA	13q14.11	NA	NA	NA	NA	rs3736953	0.44	0.44	0.396	0.417931	0.7097	0.1538	0.6643	0.1679	0.5532	0.73	0.16	0.63	0.18	0.5996	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.492186	NA	NA	0.678372	0.235588	NA	0.297	NA	2.012328
1451	1	159842691	159842691	C	G	intronic	CCDC19	NA	NA	NA	intronic	ENSG00000213085,ENSG00000256029	NA	NA	NA	NA	NA	1q23.2	NA	NA	NA	NA	rs4460634	0.63	0.63	0.606	0.609026	0.664	0.7887	0.7075	0.3321	0.6718	0.68	0.75	0.68	0.37	0.66	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.503295	NA	NA	0.663759	0.356559	NA	0.471	NA	2.012241
1451	11	117163765	117163765	C	A	intronic	BACE1	NA	NA	NA	intronic	ENSG00000186318	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs490460	0.8	0.8	0.801	0.853035	0.6272	0.9315	0.7723	0.9614	0.9151	0.63	0.95	0.73	0.95	0.7376	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.552839	NA	NA	0.624302	0.90527	NA	0.826	NA	2.010898
1451	11	62365665	62365665	G	A	intronic	MTA2	NA	NA	NA	intronic	ENSG00000149480	NA	NA	NA	NA	NA	11q12.3	NA	NA	NA	NA	rs2849031	0.72	0.72	0.691	0.737021	0.673	0.9474	0.7637	0.5855	0.772	0.68	0.94	0.71	0.52	0.6939	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.033296	NA	NA	0.62278	0.595705	NA	0.623	NA	2.01032
1451	11	62459994	62459994	A	G	ncRNA_intronic	HNRNPUL2-BSCL2	NA	NA	NA	intronic	ENSG00000168000,ENSG00000234857	NA	NA	NA	NA	NA	11q12.3	NA	NA	NA	NA	rs2850597	0.75	0.75	0.706	0.749401	0.7893	0.7589	0.8141	0.6573	0.7771	0.78	0.77	0.78	0.63	0.7756	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.325468	NA	NA	0.758548	0.675749	NA	0.674	NA	2.0098853
1451	1	22168216	22168216	C	T	intronic	HSPG2	NA	NA	NA	intronic	ENSG00000142798	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs7556412	0.65	0.65	0.657	0.623802	0.6769	0.8075	0.5836	0.4607	0.6288	0.67	0.81	0.57	0.47	0.6516	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.955413	NA	NA	0.66186	0.500227	NA	0.551	NA	2.00964
1451	3	78666765	78666765	T	C	intronic	ROBO1	NA	NA	NA	intronic	ENSG00000169855	NA	NA	NA	NA	NA	3p12.3	NA	NA	NA	NA	rs9839790	0.59	0.59	0.595	0.575479	0.6859	0.5784	0.6383	0.4486	0.5859	0.68	0.6	0.65	0.4	0.6225	0.68	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.806929	NA	NA	0.682421	0.485626	NA	0.609	NA	2.009179
1451	6	36294915	36294915	T	A	intronic	C6orf222	NA	NA	NA	intronic	ENSG00000189325	NA	NA	NA	NA	NA	6p21.31	NA	NA	NA	NA	rs6923009	0.75	0.75	0.746	0.775559	0.6481	0.7569	0.7248	0.9864	0.6769	0.63	0.7	0.74	0.98	0.6972	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.358723	NA	NA	0.648488	0.932819	NA	0.826	NA	2.006212
1451	6	47577064	47577064	G	A	intronic	CD2AP	NA	NA	NA	intronic	ENSG00000198087	NA	NA	NA	NA	NA	6p12.3	NA	NA	NA	NA	rs9395287	0.5	0.5	0.494	0.522564	0.6889	0.2808	0.4496	0.4955	0.6892	0.68	0.26	0.49	0.49	0.6173	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.285585	NA	NA	0.687791	0.52769	NA	0.623	NA	2.006009
1452	12	52661209	52661209	T	C	intergenic	KRT7,KRT81	dist=18500;dist=18488	NA	NA	intronic	ENSG00000170442	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs1870223	0.8	0.8	0.815	0.832468	0.841	0.6974	0.732	0.9894	0.8221	0.84	0.68	0.69	0.98	0.8212	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.567157	NA	NA	NA	NA	NA	0.957	NA	2.0044667
1452	2	233712049	233712049	G	A	intronic	GIGYF2	NA	NA	NA	intronic	ENSG00000204120	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs2305137	0.68	0.68	0.691	0.605232	0.7127	0.6458	0.6888	0.6301	0.3599	0.72	0.68	0.7	0.61	0.6351	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.119506	NA	NA	0.648256	0.626872	NA	0.659	NA	2.003944
1452	13	75814526	75814526	A	G	upstream	CTAGE11P	NA	NA	NA	upstream	ENSG00000214249	NA	NA	NA	NA	NA	13q22.2	NA	NA	NA	NA	rs9573500	0.68	0.68	0.608	0.758187	0.8439	0.879	0.817	0.4569	0.911	0.78	0.79	0.73	0.35	0.819	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.273141	NA	NA	NA	NA	NA	0.732	NA	2.0037666
1452	4	87024409	87024409	T	C	intronic	MAPK10	NA	NA	NA	intronic	ENSG00000109339	NA	NA	NA	NA	NA	4q21.3	NA	NA	NA	NA	rs28529458	0.62	0.62	0.584	0.59345	0.6839	0.748	0.6571	0.2466	0.7648	0.7	0.76	0.67	0.31	0.6581	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.533545	NA	NA	0.654535	0.312755	NA	0.565	NA	2.003465
1452	12	130847389	130847389	A	G	intronic	PIWIL1	NA	NA	NA	intronic	ENSG00000125207	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs2242363	0.59	0.59	0.606	0.643371	0.662	0.378	0.4337	0.8684	0.7423	0.64	0.4	0.46	0.83	0.652	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.601013	NA	NA	0.682791	0.843849	NA	0.681	NA	2.003209
1452	19	13039284	13039284	A	G	intronic	FARSA	NA	NA	NA	intronic	ENSG00000179115	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs2293683	0.71	0.71	0.694	0.68131	0.6879	0.8125	0.5403	0.6142	0.7301	0.7	0.82	0.56	0.68	0.6577	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.550308	NA	NA	0.652791	0.603268	NA	0.681	NA	2.001609
1452	6	37447075	37447075	G	A	intronic	FTSJD2	NA	NA	NA	intronic	ENSG00000137200	NA	NA	NA	NA	NA	6p21.2	NA	NA	NA	NA	rs2797790	0.67	0.67	0.708	0.660743	0.6759	0.4524	0.67	0.8699	0.5706	0.66	0.47	0.69	0.89	0.6585	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.84339	NA	NA	0.66407	0.827281	NA	0.681	NA	2.00153
1452	9	130942972	130942972	T	C	intronic	CIZ1	NA	NA	NA	intronic	ENSG00000148337	NA	NA	NA	NA	NA	9q34.11	NA	NA	NA	NA	rs45585631	0.71	0.71	0.707	0.692692	0.66	0.9444	0.768	0.4259	0.774	0.68	0.96	0.76	0.43	0.6878	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.300583	NA	NA	0.650814	0.471176	NA	0.754	NA	2.001386
1452	1	63001120	63001120	A	C	intronic	DOCK7	NA	NA	NA	intronic	ENSG00000116641	NA	NA	NA	NA	NA	1p31.3	NA	NA	NA	NA	rs1168018	0.63	0.63	0.602	0.57508	0.6958	0.7679	0.6124	0.3487	0.5317	0.69	0.78	0.66	0.36	0.6352	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.40986	NA	NA	0.67	0.376305	NA	0.601	NA	1.999
1452	9	138516531	138516531	G	C	intronic	GLT6D1	NA	NA	NA	intronic	ENSG00000204007	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs7466817	0.72	0.72	0.732	0.724042	0.6382	0.7946	0.7579	0.6876	0.7648	0.63	0.81	0.74	0.71	0.6949	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.646347	NA	NA	0.667917	0.684699	NA	0.725	NA	1.998983
1452	19	13029188	13029188	G	A	intronic	SYCE2	NA	NA	NA	intronic	ENSG00000161860	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs2965214	0.7	0.7	0.689	0.68131	0.6869	0.8482	0.5504	0.5825	0.7301	0.7	0.85	0.57	0.63	0.6602	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.297607	NA	NA	0.654019	0.593192	NA	0.688	NA	1.998881
1452	6	33639760	33639760	G	C	intronic	ITPR3	NA	NA	NA	intronic	ENSG00000096433	NA	NA	NA	NA	NA	6p21.31	NA	NA	NA	NA	rs3736893	0.73	0.73	0.732	0.76278	0.6511	0.8185	0.7277	0.7421	0.8732	0.65	0.82	0.72	0.75	0.7058	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.176996	NA	NA	0.644419	0.720608	NA	0.797	NA	1.998681
1452	6	66063513	66063513	G	A	intronic	EYS	NA	NA	NA	intronic	ENSG00000188107	NA	NA	NA	NA	NA	6q12	NA	NA	NA	NA	rs1936439	0.64	0.64	0.639	0.651158	0.6481	0.6349	0.6095	0.6543	0.6963	0.65	0.63	0.63	0.64	0.6746	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.392144	NA	NA	0.678837	0.686564	NA	0.674	NA	1.998463
1452	19	3452683	3452683	A	G	intronic	NFIC	NA	NA	NA	intronic	ENSG00000141905	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs8105687	0.6	0.6	0.594	0.583666	0.7008	0.3681	0.5648	0.7088	0.5297	0.69	0.38	0.6	0.73	0.632	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.917524	NA	NA	0.669923	0.704721	NA	0.638	NA	1.997277
1452	18	72250762	72250762	T	C	intronic	CNDP1	NA	NA	NA	intronic	ENSG00000150656	NA	NA	NA	NA	NA	18q22.3	NA	NA	NA	NA	rs11659237	0.61	0.61	0.559	0.619209	0.674	0.6726	0.7205	0.4024	0.729	0.67	0.67	0.7	0.39	0.661	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.292938	NA	NA	0.66814	0.439628	NA	0.594	NA	1.99686
1452	6	89913108	89913108	C	G	intronic	GABRR1	NA	NA	NA	intronic	ENSG00000146276	NA	NA	NA	NA	NA	6q15	NA	NA	NA	NA	rs4590241	0.73	0.73	0.693	0.742212	0.6521	0.9286	0.7925	0.674	0.6994	0.64	0.92	0.75	0.65	0.6976	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.129564	NA	NA	0.654186	0.685656	NA	0.732	NA	1.996114
1452	6	89913112	89913112	G	A	intronic	GABRR1	NA	NA	NA	intronic	ENSG00000146276	NA	NA	NA	NA	NA	6q15	NA	NA	NA	NA	rs4457139	0.73	0.73	0.688	0.742212	0.6521	0.9286	0.7925	0.674	0.6994	0.64	0.92	0.75	0.65	0.6974	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.239113	NA	NA	0.654535	0.685656	NA	0.732	NA	1.995965
1452	3	100354683	100354683	G	A	intronic	GPR128	NA	NA	NA	intronic	ENSG00000144820	NA	NA	NA	NA	NA	3q12.2	NA	NA	NA	NA	rs1520652	0.72	0.72	0.666	0.745008	0.6372	0.9841	0.7882	0.5272	0.8732	0.63	0.99	0.79	0.49	0.7159	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.232885	NA	NA	0.651395	0.527248	NA	0.377	NA	1.995505
1452	2	220428381	220428381	A	T	intronic	OBSL1	NA	NA	NA	intronic	ENSG00000124006	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs2303543	0.57	0.57	0.538	0.556709	0.6809	0.6627	0.5259	0.2534	0.7515	0.69	0.65	0.56	0.29	0.6462	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.724597	1.724597	NA	0.677809	0.337794	NA	0.623	NA	1.995091
1453	1	204512100	204512100	T	C	intronic	MDM4	NA	NA	NA	intronic	ENSG00000198625	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs4252717	0.57	0.57	0.492	0.535144	0.6879	0.7024	0.6095	0.2073	0.5961	0.69	0.69	0.59	0.22	0.642	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.01918	NA	NA	0.675814	0.279392	NA	0.536	NA	1.994286
1453	20	25027526	25027526	G	A	intronic	ACSS1	NA	NA	NA	intronic	ENSG00000154930	NA	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	rs6083730	0.73	0.73	0.728	0.717252	0.6849	0.7649	0.598	0.8585	0.5951	0.67	0.78	0.64	0.84	0.6673	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.28738	NA	NA	0.656454	0.825342	NA	0.659	NA	1.991346
1453	10	15713667	15713667	C	G	intronic	ITGA8	NA	NA	NA	intronic	ENSG00000077943	NA	NA	NA	NA	NA	10p13	NA	NA	NA	NA	rs7100510	0.61	0.61	0.636	0.63738	0.663	0.7431	0.5548	0.4304	0.8405	0.66	0.73	0.57	0.43	0.6637	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.336199	NA	NA	0.683605	0.470268	NA	0.587	NA	1.989695
1453	7	120428607	120428607	G	A	UTR3	TSPAN12	NM_012338:c.*39C>T	NA	NA	UTR3	ENSG00000106025	ENST00000222747:c.*39C>T,ENST00000450414:c.*807C>T,ENST00000415871:c.*39C>T	NA	NA	NA	NA	7q31.31	NA	NA	NA	NA	rs41622	0.83	0.83	0.81	0.846246	0.7654	0.9593	0.8516	0.7625	0.9223	0.75	0.97	0.83	0.76	0.8048	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.191207	NA	NA	0.77407	0.767257	NA	0.826	NA	1.9890634
1453	2	183088584	183088584	G	A	intronic	PDE1A	NA	NA	NA	intronic	ENSG00000115252	NA	NA	NA	NA	NA	2q32.1	NA	NA	NA	NA	rs3754929	0.69	0.69	0.689	0.726438	0.6461	0.7589	0.6931	0.739	0.7822	0.64	0.74	0.68	0.72	0.6868	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.525983	NA	NA	0.678571	0.729006	NA	0.638	NA	1.988529
1453	8	73926236	73926236	T	G	intronic	TERF1	NA	NA	NA	intronic	ENSG00000147601	NA	NA	NA	NA	NA	8q21.11	NA	NA	NA	NA	rs2975841	0.56	0.56	0.56	0.575479	0.675	0.3065	0.4654	0.7496	0.593	0.67	0.27	0.49	0.76	0.6369	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.868903	NA	NA	0.699721	0.745	ID=COSN168350;OCCURENCE=1(large_intestine)	0.464	NA	1.988379
1453	16	105444	105444	C	T	intronic	SNRNP25	NA	NA	NA	intronic	ENSG00000161981	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs2541594	0.57	0.57	0.512	0.55012	0.675	0.6171	0.5821	0.357	0.591	0.68	0.58	0.62	0.36	0.651	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.568168	NA	NA	0.685698	0.426918	NA	0.572	NA	1.988302
1453	2	233712296	233712296	G	A	intronic	GIGYF2	NA	NA	NA	intronic	ENSG00000204120	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs6437074	0.71	0.71	0.722	0.639976	0.7137	0.6458	0.6945	0.7572	0.3609	0.72	0.68	0.71	0.74	0.6449	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.806369	NA	NA	0.65407	0.740486	NA	0.638	NA	1.98733
1453	14	33242863	33242863	T	C	intronic	AKAP6	NA	NA	NA	intronic	ENSG00000151320	NA	NA	NA	NA	NA	14q12	NA	NA	NA	NA	rs2273163	0.54	0.54	0.505	0.525359	0.6879	0.4385	0.7334	0.2958	0.6104	0.7	0.43	0.75	0.29	0.6418	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.785782	NA	NA	0.683256	0.371312	ID=COSN164658;OCCURENCE=1(NS)	0.507	NA	1.987044
1454	11	43940566	43940566	T	C	ncRNA_intronic	LOC100507300	NA	NA	NA	ncRNA_intronic	ENSG00000244926	NA	NA	NA	NA	NA	11p11.2	NA	NA	NA	NA	rs7926534	0.86	0.86	0.839	0.843051	0.8966	0.9752	0.866	0.6165	0.9417	0.9	0.98	0.88	0.63	0.8887	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.19077	NA	NA	0.896744	0.673627	NA	0.819	NA	1.9846226
1454	7	137801444	137801444	C	T	UTR3	AKR1D1	NM_001190907:c.*61C>T,NM_001190906:c.*36C>T,NM_005989:c.*36C>T	NA	NA	UTR3	ENSG00000122787	ENST00000432161:c.*61C>T,ENST00000411726:c.*36C>T,ENST00000242375:c.*36C>T	NA	NA	NA	NA	7q33	NA	NA	NA	NA	rs1872930	0.77	0.77	0.774	0.777955	0.7813	0.7351	0.6614	0.8759	0.7689	0.78	0.71	0.68	0.89	0.7781	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.063945	NA	NA	0.790349	0.870177	NA	0.855	NA	1.9835844
1454	15	34137292	34137292	C	G	intronic	RYR3	NA	NA	NA	intronic	ENSG00000198838	NA	NA	NA	NA	NA	15q14	NA	NA	NA	NA	rs12899715	0.52	0.52	0.484	0.488818	0.7018	0.4266	0.6916	0.2201	0.5532	0.73	0.41	0.62	0.23	0.6324	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.766154	NA	NA	0.682651	0.30873	NA	0.493	NA	1.983149
1454	12	72030252	72030252	T	C	intronic	ZFC3H1	NA	NA	NA	intronic	ENSG00000133858	NA	NA	NA	NA	NA	12q21.1	NA	NA	NA	NA	rs1149006	0.45	0.45	0.398	0.412939	0.7137	0.1806	0.6556	0.1853	0.4785	0.71	0.18	0.66	0.22	0.5849	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.006509	2.006509	NA	0.719072	0.239601	NA	0.471	NA	1.982328
1454	14	22952088	22952088	G	A	intergenic	OR4E2,DAD1	dist=817850;dist=81719	NA	NA	upstream;downstream	ENSG00000251002;ENSG00000211836,ENSG00000211837	NA	NA	NA	NA	NA	14q11.2	NA	Name=Pol2-4H8	NA	NA	rs227861	0.78	0.78	0.773	0.75	0.8549	0.8353	0.6931	0.6097	0.7843	0.87	0.85	0.72	0.63	0.8077	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.195477	NA	NA	0.855537	0.646242	NA	0.616	NA	1.981863
1454	2	4135981	4135981	C	T	intergenic	LOC100505964,LOC727982	dist=114359;dist=539827	NA	NA	intergenic	ENSG00000264071,ENSG00000229550	dist=58432;dist=48253	NA	NA	NA	NA	2p25.3	NA	NA	NA	NA	rs1024026	0.4	0.4	0.385	0.357827	0.4622	0.1925	0.4726	0.416	0.2607	0.47	0.19	0.5	0.46	0.4202	0.5	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.562696	NA	NA	0.469111	0.445776	NA	0.297	NA	1.9818224
1454	5	160044855	160044855	G	A	intronic	ATP10B	NA	NA	NA	ncRNA_intronic	ENSG00000253687	NA	NA	NA	NA	NA	5q34	NA	NA	NA	NA	rs1363199	0.76	0.76	0.756	0.739816	0.7873	0.8214	0.6729	0.652	0.773	0.79	0.81	0.73	0.66	0.7664	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.865225	NA	NA	0.798464	0.6888	NA	0.768	NA	1.9811693
1454	5	6618186	6618186	T	C	intronic	NSUN2	NA	NA	NA	intronic	ENSG00000037474	NA	NA	NA	NA	NA	5p15.31	NA	NA	NA	NA	rs10475338	0.68	0.68	0.679	0.669329	0.673	0.6746	0.6138	0.7156	0.637	0.66	0.68	0.65	0.73	0.6611	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.655598	NA	NA	0.684884	0.710849	NA	0.681	NA	1.981016
1454	1	16358932	16358932	T	C	intronic	CLCNKA	NA	NA	NA	intronic	ENSG00000186510	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs10803407	0.76	0.76	0.77	0.749002	0.669	0.9742	0.5951	0.7693	0.681	0.67	0.98	0.61	0.77	0.6882	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.462768	NA	NA	0.663605	0.756922	NA	0.71	NA	1.979195
1454	14	51355517	51355517	C	A	intronic	ABHD12B	NA	NA	NA	intronic	ENSG00000100504,ENSG00000131969	NA	NA	NA	NA	NA	14q22.1	NA	NA	NA	NA	rs10144606	0.59	0.59	0.609	0.626797	0.667	0.4365	0.5879	0.6006	0.8446	0.65	0.47	0.57	0.63	0.6619	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.072201	NA	NA	0.692209	0.6069	NA	0.63	NA	1.978891
1454	5	6620459	6620459	A	G	intronic	NSUN2	NA	NA	NA	intronic	ENSG00000037474	NA	NA	NA	NA	NA	5p15.31	NA	NA	NA	NA	rs2288446	0.69	0.69	0.68	0.675519	0.673	0.6786	0.6182	0.733	0.638	0.66	0.68	0.65	0.75	0.6629	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.147846	NA	NA	0.685233	0.733999	NA	0.681	NA	1.978867
1454	6	116264354	116264354	C	A	intronic	FRK	NA	NA	NA	intronic	ENSG00000111816	NA	NA	NA	NA	NA	6q22.1	NA	NA	NA	NA	rs550480	0.75	0.75	0.727	0.755591	0.667	0.9812	0.7579	0.6135	0.8047	0.69	0.98	0.72	0.61	0.7173	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.62786	NA	NA	0.638087	0.619545	NA	0.681	NA	1.977613
1454	5	6602544	6602544	T	C	intronic	NSUN2	NA	NA	NA	intronic	ENSG00000037474	NA	NA	NA	NA	NA	5p15.31	NA	NA	NA	NA	rs2303711	0.69	0.69	0.697	0.676917	0.6759	0.6746	0.621	0.7398	0.635	0.66	0.68	0.65	0.76	0.6627	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.292933	NA	NA	0.684767	0.738538	NA	0.674	NA	1.976633
1454	6	75830974	75830974	G	C	intronic	COL12A1	NA	NA	NA	intronic	ENSG00000111799	NA	NA	NA	NA	NA	6q13	NA	NA	NA	NA	rs499018	0.59	0.59	0.602	0.612819	0.6769	0.4256	0.6614	0.587	0.7403	0.67	0.43	0.64	0.61	0.6551	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.801074	NA	NA	0.691373	0.589362	NA	0.609	NA	1.976627
1454	22	18222263	18222263	A	G	intronic	BID	NA	NA	NA	intronic	ENSG00000015475	NA	NA	NA	NA	NA	22q11.21	NA	NA	NA	NA	rs181390	0.74	0.74	0.696	0.741813	0.6402	0.9315	0.755	0.68	0.7249	0.64	0.94	0.75	0.68	0.7081	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.734785	NA	NA	0.676279	0.703359	NA	0.609	NA	1.975421
1455	1	119466275	119466275	A	G	intronic	TBX15	NA	NA	NA	intronic	ENSG00000092607	NA	NA	NA	NA	NA	1p12	NA	NA	NA	NA	rs4659129	0.66	0.66	0.676	0.641573	0.6839	0.7817	0.6196	0.5696	0.5665	0.68	0.75	0.62	0.56	0.6598	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.799405	NA	NA	0.681744	0.591012	NA	0.761	NA	1.974556
1455	22	51010788	51010788	T	A	ncRNA_intronic	CHKB-CPT1B	NA	NA	NA	intronic	ENSG00000205560,ENSG00000254413	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs131761	0.88	0.88	0.889	0.906949	0.7704	0.9871	0.8401	0.9894	0.9008	0.78	0.98	0.81	0.98	0.8295	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.74144	NA	NA	0.759884	0.96049	NA	0.942	NA	1.9735493
1455	19	10745764	10745764	T	C	intronic	SLC44A2	NA	NA	NA	intronic	ENSG00000129353	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs2163832	0.72	0.72	0.736	0.770767	0.6262	0.7044	0.7896	0.944	0.7403	0.62	0.65	0.75	0.93	0.7263	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.484134	NA	NA	0.675233	0.900136	NA	0.645	NA	1.972267
1455	1	41298652	41298652	T	C	intronic	KCNQ4	NA	NA	NA	intronic	ENSG00000117013	NA	NA	NA	NA	NA	1p34.2	NA	NA	NA	NA	rs913378	0.71	0.71	0.666	0.738618	0.6541	0.8403	0.7738	0.6815	0.773	0.66	0.84	0.73	0.65	0.7139	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.192374	NA	NA	0.660581	0.687245	NA	0.754	NA	1.971419
1455	12	15731744	15731744	C	T	intronic	PTPRO	NA	NA	NA	intronic	ENSG00000151490	NA	NA	NA	NA	NA	12p12.3	NA	NA	NA	NA	rs1024843	0.58	0.58	0.558	0.576877	0.665	0.7004	0.6974	0.1936	0.7914	0.68	0.75	0.65	0.2	0.6713	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.325158	NA	NA	0.693488	0.274977	NA	0.565	NA	1.970212
1455	4	143130219	143130219	T	A	intronic	INPP4B	NA	NA	NA	intronic	ENSG00000109452	NA	NA	NA	NA	NA	4q31.21	NA	NA	NA	NA	rs1994217	0.57	0.57	0.526	0.50639	0.7058	0.7083	0.6888	0.0537	0.5757	0.73	0.71	0.68	0.07	0.6373	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.434504	NA	NA	0.687209	0.172719	NA	0.399	NA	1.969691
1455	1	159828746	159828746	G	A	intronic	VSIG8	NA	NA	NA	intronic	ENSG00000243284,ENSG00000256029	NA	NA	NA	NA	NA	1q23.2	NA	NA	NA	NA	rs2501337	0.65	0.65	0.645	0.638978	0.6799	0.745	0.7493	0.4713	0.636	0.69	0.7	0.7	0.51	0.6731	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.560021	NA	NA	0.67814	0.475261	NA	0.522	NA	1.96886
1455	16	58036347	58036347	G	A	intronic	USB1	NA	NA	NA	intronic	ENSG00000103005	NA	NA	NA	NA	NA	16q21	NA	NA	NA	NA	rs3743560	0.56	0.56	0.567	0.56849	0.6978	0.5	0.4669	0.4622	0.7219	0.7	0.49	0.54	0.46	0.6398	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.529421	NA	NA	0.696067	0.476548	NA	0.659	NA	1.966333
1455	3	125786760	125786760	G	A	intronic	SLC41A3	NA	NA	NA	intronic	ENSG00000114544	NA	NA	NA	NA	NA	3q21.2	NA	NA	NA	NA	rs4308226	0.65	0.65	0.628	0.648163	0.6571	0.6627	0.6816	0.5734	0.7014	0.66	0.65	0.68	0.59	0.677	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.694378	NA	NA	0.700581	0.579437	NA	0.688	NA	1.965319
1455	1	152193990	152193990	A	G	intronic	HRNR	NA	NA	NA	ncRNA_intronic	ENSG00000237975	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs11204938	0.59	0.59	0.594	0.531949	0.829	0.3274	0.5519	0.469	0.5082	0.82	0.36	0.63	0.47	0.7094	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.284622	NA	NA	0.829919	0.523842	NA	0.688	NA	1.9650143
1456	8	121267617	121267617	C	T	intronic	COL14A1	NA	NA	NA	intronic	ENSG00000187955	NA	NA	NA	NA	NA	8q24.12	NA	NA	NA	NA	rs993823	0.77	0.77	0.797	0.770168	0.6581	0.8452	0.7277	0.8933	0.6718	0.65	0.85	0.75	0.88	0.6991	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.252252	NA	NA	0.677907	0.857921	NA	0.797	NA	1.964893
1456	2	241452198	241452198	T	C	intronic	ANKMY1	NA	NA	NA	intronic	ENSG00000144504	NA	NA	NA	NA	NA	2q37.3	NA	NA	NA	NA	rs12695025	0.67	0.67	0.675	0.677316	0.6799	0.7877	0.6239	0.5499	0.771	0.7	0.8	0.62	0.53	0.6945	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.12906	NA	NA	0.661977	0.578075	NA	0.688	NA	1.963623
1456	8	92307978	92307978	C	T	intronic	SLC26A7	NA	NA	NA	intronic	ENSG00000147606	NA	NA	NA	NA	NA	8q21.3	NA	NA	NA	NA	rs10107822	0.6	0.6	0.585	0.613419	0.6998	0.6587	0.5101	0.4955	0.7106	0.71	0.62	0.52	0.49	0.6444	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.031775	NA	NA	0.692326	0.50522	NA	0.659	NA	1.963474
1456	8	104934028	104934028	G	A	intronic	RIMS2	NA	NA	NA	intronic	ENSG00000176406	NA	NA	NA	NA	NA	8q22.3	NA	NA	NA	NA	rs6468897	0.58	0.58	0.616	0.571685	0.7097	0.2421	0.4914	0.7511	0.5838	0.73	0.25	0.54	0.76	0.6366	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.579102	NA	0	0.690798	0.71797	NA	0.587	NA	1.962902
1456	2	241452212	241452212	T	C	intronic	ANKMY1	NA	NA	NA	intronic	ENSG00000144504	NA	NA	NA	NA	NA	2q37.3	NA	NA	NA	NA	rs12695026	0.68	0.68	0.658	0.677117	0.6799	0.7877	0.6225	0.5499	0.771	0.7	0.8	0.62	0.54	0.6952	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.056578	NA	NA	0.662442	0.577621	NA	0.688	NA	1.962458
1456	7	140044979	140044979	C	T	intronic	SLC37A3	NA	NA	NA	intronic	ENSG00000157800	NA	NA	NA	NA	NA	7q34	NA	NA	NA	NA	rs6974016	0.69	0.69	0.719	0.66893	0.6938	0.4871	0.6657	0.9614	0.4376	0.69	0.49	0.64	0.96	0.6609	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.363979	NA	NA	0.687093	0.907853	ID=COSN168207;OCCURENCE=1(large_intestine)	0.746	NA	1.958207
1456	4	48994138	48994138	G	T	intronic	CWH43	NA	NA	NA	intronic	ENSG00000109182	NA	NA	NA	NA	NA	4p11	NA	NA	NA	NA	rs28678278	0.5	0.5	0.441	0.444289	0.7207	0.2867	0.745	0.1755	0.4724	0.73	0.3	0.77	0.19	0.6267	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.051966	2.051966	NA	0.694884	0.254426	NA	0.428	NA	1.957716
1456	9	123632829	123632829	G	C	intronic	PHF19	NA	NA	NA	intronic	ENSG00000119403	NA	NA	NA	NA	NA	9q33.2	NA	NA	NA	NA	rs4836833	0.61	0.61	0.608	0.636981	0.6819	0.498	0.7824	0.5303	0.7751	0.69	0.48	0.76	0.55	0.683	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.341761	NA	NA	0.677558	0.578529	NA	0.638	NA	1.957542
1456	21	42860307	42860307	C	T	intronic	TMPRSS2	NA	NA	NA	intronic	ENSG00000184012	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs422471	0.54	0.54	0.548	0.554712	0.6978	0.3006	0.5605	0.5681	0.6472	0.68	0.3	0.56	0.57	0.624	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.333796	NA	NA	0.721395	0.561734	NA	0.609	NA	1.956805
1457	20	3147024	3147024	G	A	intronic	LZTS3	NA	NA	NA	intronic	ENSG00000088899	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs7260750	0.81	0.81	0.814	0.826078	0.6869	0.9663	0.7003	0.9342	0.7679	0.66	0.96	0.71	0.94	0.704	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.464	NA	NA	0.654268	0.89175	NA	0.841	NA	1.954832
1457	17	37829129	37829129	A	G	intronic	PGAP3	NA	NA	NA	intronic	ENSG00000161395	NA	NA	NA	NA	NA	17q12	NA	NA	NA	NA	rs2247862	0.58	0.58	0.588	0.578874	0.6889	0.4058	0.5562	0.5492	0.7004	0.7	0.48	0.58	0.53	0.6701	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.88725	NA	NA	0.686744	0.564231	NA	0.594	NA	1.954256
1457	21	47722391	47722391	A	G	intronic	C21orf58	NA	NA	NA	intronic	ENSG00000160298	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs1556337	0.55	0.55	0.506	0.53155	0.6789	0.4454	0.6729	0.3525	0.6104	0.67	0.41	0.73	0.38	0.6689	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.947923	NA	NA	0.698651	0.422116	NA	0.297	NA	1.953549
1457	1	160147502	160147502	T	G	intronic	ATP1A4	NA	NA	NA	intronic	ENSG00000132681	NA	NA	NA	NA	NA	1q23.2	NA	NA	NA	NA	rs731852	0.78	0.78	0.749	0.786542	0.673	0.881	0.7867	0.8374	0.7372	0.66	0.89	0.77	0.84	0.7188	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.544251	NA	NA	0.654884	0.813663	NA	0.812	NA	1.953316
1457	3	151085578	151085578	C	A	intronic	MED12L,P2RY12	NA	NA	NA	intronic	ENSG00000144893,ENSG00000169313	NA	NA	NA	NA	NA	3q25.1	NA	NA	NA	NA	rs3732764	0.77	0.77	0.774	0.808706	0.6402	0.8403	0.7767	0.9039	0.8436	0.64	0.82	0.76	0.92	0.7359	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.839391	NA	NA	0.670698	0.878121	NA	0.783	NA	1.953202
1457	13	77725106	77725106	C	A	intronic	MYCBP2	NA	NA	NA	intronic	ENSG00000005810	NA	NA	NA	NA	NA	13q22.3	NA	NA	NA	NA	rs9574006	0.49	0.49	0.44	0.445487	0.7038	0.3482	0.6643	0.1853	0.4765	0.7	0.35	0.69	0.2	0.621	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.335966	1.335966	NA	0.722726	0.266682	NA	0.442	NA	1.952474
1457	3	179109735	179109735	A	G	intronic	MFN1	NA	NA	NA	intronic	ENSG00000171109	NA	NA	NA	NA	NA	3q26.33	NA	NA	NA	NA	rs2287209	0.71	0.71	0.709	0.735224	0.6889	0.6567	0.7637	0.8215	0.727	0.67	0.66	0.77	0.79	0.7004	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.050818	NA	NA	0.66015	0.803002	NA	0.616	NA	1.95055
1457	21	42860485	42860485	G	C	intronic	TMPRSS2	NA	NA	NA	intronic	ENSG00000184012	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs386416	0.54	0.54	0.53	0.555112	0.6998	0.3016	0.5605	0.5681	0.6462	0.69	0.3	0.56	0.57	0.6287	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.876442	NA	NA	0.721047	0.561308	NA	0.609	NA	1.950453
1457	5	160049355	160049355	C	T	intronic	ATP10B	NA	NA	NA	ncRNA_intronic	ENSG00000253687	NA	NA	NA	NA	NA	5q34	NA	NA	NA	NA	rs2032804	0.79	0.79	0.807	0.779153	0.7893	0.8244	0.6816	0.7874	0.7802	0.8	0.81	0.73	0.8	0.7934	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.991021	NA	NA	0.802008	0.801036	NA	0.826	NA	1.9486253
1457	18	28711519	28711519	C	T	intronic	DSC1	NA	NA	NA	ncRNA_exonic	ENSG00000263698	NA	NA	NA	NA	NA	18q12.1	NA	NA	NA	NA	rs1789072	0.61	0.61	0.583	0.591653	0.8141	0.5129	0.6744	0.2965	0.7843	0.83	0.51	0.7	0.32	0.7466	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.655625	NA	NA	0.824419	0.390831	NA	0.457	NA	1.9482143
1457	10	124333308	124333308	G	A	intronic	DMBT1	NA	NA	NA	intronic	ENSG00000187908	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs2277235	0.63	0.63	0.654	0.636581	0.6769	0.7579	0.7752	0.5023	0.5532	0.64	0.73	0.74	0.43	0.6867	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.000036	NA	NA	0.688553	0.543594	NA	0.696	NA	1.947847
1457	14	69376658	69376658	A	C	intronic	ACTN1	NA	NA	NA	intronic	ENSG00000072110	NA	NA	NA	NA	NA	14q24.1	NA	NA	NA	NA	rs743128	0.84	0.84	0.832	0.878395	0.6302	0.996	0.7997	0.9856	0.9233	0.66	1	0.76	0.98	0.7694	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.081821	NA	NA	0.652558	0.933273	NA	0.79	NA	1.947842
1457	1	237732395	237732395	G	A	intronic	RYR2	NA	NA	NA	intronic	ENSG00000198626	NA	NA	NA	NA	NA	1q43	NA	NA	NA	NA	rs2805396	0.5	0.5	0.463	0.492812	0.6978	0.2619	0.7176	0.2443	0.6963	0.7	0.27	0.71	0.29	0.6443	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.03389	NA	NA	0.710501	0.35379	NA	0.529	NA	1.947399
1457	1	22336371	22336371	C	A	intronic	CELA3A	NA	NA	NA	intronic	ENSG00000142789	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs3806297	0.52	0.52	0.554	0.508786	0.7247	0.2599	0.4395	0.4773	0.635	0.72	0.28	0.48	0.5	0.6257	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.629706	NA	NA	0.70407	0.489777	NA	0.362	NA	1.94553
1457	16	1818152	1818152	C	T	intronic	MAPK8IP3	NA	NA	NA	intronic	ENSG00000138834	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs2076430	0.69	0.69	0.146	0.765575	0.7903	0.6488	0.8732	0.8457	0.6759	0.68	0.59	0.8	0.75	0.7884	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.561147	NA	NA	0.475889	0.491185	NA	NA	NA	1.945411
1458	10	124335866	124335866	C	T	intronic	DMBT1	NA	NA	NA	intronic	ENSG00000187908	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs1985025	0.67	0.67	0.648	0.636581	0.6769	0.7579	0.7752	0.5023	0.5532	0.68	0.76	0.76	0.47	0.6896	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.047801	NA	NA	0.689526	0.546397	NA	0.696	NA	1.943974
1458	11	111623088	111623088	T	A	intronic	PPP2R1B	NA	NA	NA	intronic	ENSG00000137713	NA	NA	NA	NA	NA	11q23.1	NA	NA	NA	NA	rs4936675	0.75	0.75	0.759	0.753195	0.674	0.7837	0.7104	0.9183	0.6104	0.67	0.77	0.69	0.89	0.7089	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.273786	NA	NA	0.673726	0.885279	NA	0.812	NA	1.943374
1458	1	111778824	111778824	T	C	intronic	CHI3L2	NA	NA	NA	intronic	ENSG00000064886	NA	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	rs2251608	0.65	0.65	0.604	0.646965	0.674	0.6756	0.6628	0.5287	0.7382	0.68	0.66	0.68	0.55	0.6899	0.69	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.509346	NA	NA	0.694716	0.561081	NA	0.601	NA	1.941384
1458	7	56122058	56122058	A	T	intronic	CCT6A	NA	NA	NA	intronic	ENSG00000146731	NA	NA	NA	NA	NA	7p11.2	NA	NA	NA	NA	rs6593297	0.62	0.62	0.634	0.642372	0.6789	0.7103	0.6614	0.5968	0.5828	0.65	0.67	0.62	0.52	0.6837	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.342133	NA	NA	0.696047	0.598048	NA	0.696	NA	1.941353
1458	19	49424381	49424381	C	A	intronic	NUCB1	NA	NA	NA	intronic	ENSG00000104805	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs12979328	0.46	0.46	0.405	0.449281	0.7048	0.3839	0.5764	0.0386	0.7188	0.72	0.37	0.57	0.07	0.6324	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.20442	NA	NA	0.721912	0.156065	NA	0.391	NA	1.940888
1458	19	1011823	1011823	A	G	intronic	TMEM259	NA	NA	NA	intronic	ENSG00000182087	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs2240161	0.64	0.64	0.674	0.674321	0.6809	0.5308	0.5245	0.8109	0.7372	0.68	0.5	0.57	0.8	0.7045	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.97799	NA	NA	0.674419	0.796236	NA	0.21	NA	1.940181
1458	17	17179299	17179299	C	G	intronic	COPS3	NA	NA	NA	intronic	ENSG00000141030	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs4985760	0.76	0.76	0.765	0.751398	0.6849	0.8462	0.7017	0.7912	0.7035	0.7	0.86	0.69	0.78	0.7032	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.913416	NA	NA	0.671744	0.748525	NA	0.732	NA	1.940156
1458	22	25625554	25625554	G	A	intronic	CRYBB2	NA	NA	NA	intronic	ENSG00000244752	NA	NA	NA	NA	NA	22q11.23	NA	NA	NA	NA	rs4049505	0.78	0.78	0.786	0.791933	0.668	0.9633	0.7219	0.792	0.7924	0.69	0.96	0.72	0.76	0.7242	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.202462	NA	NA	0.669535	0.783704	NA	0.681	NA	1.938265
1458	17	7192198	7192198	T	G	intronic	YBX2	NA	NA	NA	intronic	ENSG00000006047	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs222841	0.49	0.49	0.438	0.473842	0.7068	0.3601	0.5331	0.3033	0.5399	0.67	0.36	0.59	0.28	0.6315	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.537362	NA	NA	0.724884	0.368588	NA	0.486	NA	1.936816
1459	19	50140209	50140209	C	T	intronic	RRAS	NA	NA	NA	intronic	ENSG00000126458	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs1368463	0.76	0.76	0.757	0.73742	0.6978	0.8343	0.7954	0.7769	0.5838	0.7	0.86	0.75	0.77	0.7041	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.158927	NA	NA	0.663256	0.761235	NA	0.783	NA	1.934844
1459	14	55902542	55902542	G	A	intronic	TBPL2	NA	NA	NA	intronic	ENSG00000182521	NA	NA	NA	NA	NA	14q22.3	NA	NA	NA	NA	rs7149317	0.73	0.73	0.699	0.742412	0.6859	0.6786	0.7738	0.8124	0.7495	0.68	0.68	0.8	0.8	0.7117	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.673508	NA	NA	0.667948	0.800182	NA	0.674	NA	1.934452
1459	14	90767746	90767746	C	A	intronic	NRDE2	NA	NA	NA	intronic	ENSG00000119720	NA	NA	NA	NA	NA	14q32.11	NA	NA	NA	NA	rs3742669	0.7	0.7	0.696	0.682708	0.671	0.7976	0.6499	0.59	0.7249	0.68	0.8	0.65	0.64	0.6967	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.117066	NA	NA	0.698069	0.613482	NA	0.688	NA	1.934231
1459	6	76022090	76022090	G	C	intronic	FILIP1	NA	NA	NA	intronic	ENSG00000118407	NA	NA	NA	NA	NA	6q14.1	NA	NA	NA	NA	rs9343281	0.67	0.67	0.692	0.70008	0.6809	0.5734	0.6441	0.8381	0.7035	0.68	0.55	0.66	0.81	0.6847	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.088554	NA	NA	0.700233	0.81911	NA	0.826	NA	1.934167
1459	2	170665108	170665108	G	A	intronic	SSB	NA	NA	NA	intronic	ENSG00000138385	NA	NA	NA	NA	NA	2q31.1	NA	NA	NA	NA	rs2556352	0.59	0.59	0.566	0.564896	0.7097	0.4653	0.7248	0.4834	0.5153	0.7	0.48	0.71	0.46	0.6549	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.22808	NA	NA	0.702674	0.526782	NA	0.638	NA	1.932726
1459	2	26533023	26533023	C	T	intronic	GPR113	NA	NA	NA	intronic	ENSG00000138018,ENSG00000173567	NA	NA	NA	NA	NA	2p23.3	NA	NA	NA	NA	rs3851967	0.67	0.67	0.664	0.626198	0.6928	0.7034	0.6931	0.5098	0.5879	0.7	0.75	0.67	0.52	0.6736	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.089615	NA	NA	0.701512	0.528143	NA	0.486	NA	1.932088
1459	3	73437112	73437112	A	G	intronic	PDZRN3	NA	NA	NA	intronic	ENSG00000121440	NA	NA	NA	NA	NA	3p13	NA	NA	NA	NA	rs6549532	0.8	0.8	0.81	0.782348	0.668	0.8591	0.7435	0.9349	0.6421	0.68	0.88	0.74	0.92	0.7263	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.097017	NA	NA	0.673721	0.896959	NA	0.826	NA	1.931979
1459	17	27004703	27004703	C	A	intronic	SUPT6H	NA	NA	NA	intronic	ENSG00000109111	NA	NA	NA	NA	NA	17q11.2	NA	NA	NA	NA	rs7207976	0.62	0.62	0.604	0.622604	0.6968	0.7748	0.6772	0.3684	0.6943	0.7	0.72	0.66	0.36	0.6677	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.08254	NA	NA	0.704535	0.418747	NA	0.594	NA	1.930965
1459	9	35711806	35711806	G	T	intronic	TLN1	NA	NA	NA	intronic	ENSG00000137076	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs2249250	0.6	0.6	0.567	0.624601	0.6909	0.5883	0.6729	0.447	0.7996	0.7	0.56	0.67	0.42	0.6851	0.7	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.660396	NA	NA	0.693256	0.489333	NA	0.601	NA	1.930744
1459	17	7193060	7193060	A	G	intronic	YBX2	NA	NA	NA	intronic	ENSG00000006047	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs55781423	0.52	0.52	NA	0.503195	0.7068	0.3562	0.5432	0.4085	0.545	0.7	0.36	0.59	0.37	0.6358	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.161413	NA	NA	0.727262	0.452543	NA	0.551	NA	1.930138
1459	1	6695802	6695802	A	G	intronic	DNAJC11	NA	NA	NA	intronic	ENSG00000007923	NA	NA	NA	NA	NA	1p36.31	NA	NA	NA	NA	rs6577583	0.66	0.66	0.683	0.702476	0.6968	0.6359	0.6182	0.733	0.7955	0.68	0.63	0.64	0.71	0.6737	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.344099	NA	NA	0.699419	0.712665	NA	0.761	NA	1.930081
1459	17	3665160	3665160	C	G	intronic	ITGAE	NA	NA	NA	intronic	ENSG00000083457	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs220471	0.58	0.58	0.604	0.561701	0.7495	0.1875	0.5231	0.823	0.4284	0.74	0.18	0.57	0.81	0.6091	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.500216	NA	NA	0.712093	0.793463	NA	0.572	NA	1.929307
1459	1	110169957	110169957	A	G	intronic	AMPD2	NA	NA	NA	intronic	ENSG00000116337	NA	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	rs524998	0.82	0.82	0.825	0.850439	0.6769	0.9812	0.7867	0.8865	0.8906	0.67	0.99	0.77	0.9	0.7462	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.954159	NA	NA	0.648023	0.864276	NA	0.819	NA	1.928877
1459	5	176011264	176011264	T	C	intronic	CDHR2	NA	NA	NA	intronic	ENSG00000074276	NA	NA	NA	NA	NA	5q35.2	NA	NA	NA	NA	rs752139	0.58	0.58	0.569	0.557907	0.6968	0.3502	0.6628	0.6044	0.4918	0.7	0.34	0.72	0.57	0.6475	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.028363	NA	NA	0.727209	0.642306	NA	0.543	NA	1.928491
1459	12	23998888	23998888	T	C	intronic	SOX5	NA	NA	NA	intronic	ENSG00000134532	NA	NA	NA	NA	NA	12p12.1	NA	NA	NA	NA	rs7980561	0.7	0.7	0.68	0.736621	0.665	0.8938	0.7334	0.5885	0.8507	0.65	0.88	0.72	0.57	0.7229	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.254532	NA	NA	0.683837	0.605311	NA	0.609	NA	1.928263
1459	6	8016089	8016089	C	T	ncRNA_intronic	BLOC1S5-TXNDC5,EEF1E1-MUTED	NA	NA	NA	intronic	ENSG00000188428,ENSG00000259040,ENSG00000265818	NA	NA	NA	NA	NA	6p24.3	NA	NA	NA	NA	rs2057185	0.81	0.81	0.806	0.785543	0.8042	0.9712	0.817	0.6135	0.7853	0.82	0.97	0.81	0.6	0.8054	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.419773	NA	NA	0.795814	0.610304	NA	0.739	NA	1.9279193
1459	4	120072233	120072233	G	C	intronic	MYOZ2	NA	NA	NA	intronic	ENSG00000172399	NA	NA	NA	NA	NA	4q26	NA	NA	NA	NA	rs6828875	0.57	0.57	0.516	0.54353	0.7008	0.6141	0.6657	0.2458	0.6247	0.72	0.6	0.64	0.26	0.6479	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.659384	NA	NA	0.724523	0.320926	NA	0.587	NA	1.926777
1459	5	175995935	175995935	C	T	intronic	CDHR2	NA	NA	NA	intronic	ENSG00000074276	NA	NA	NA	NA	NA	5q35.2	NA	NA	NA	NA	rs10056130	0.54	0.54	0.55	0.511382	0.6988	0.3562	0.6556	0.4274	0.4898	0.7	0.35	0.7	0.41	0.6381	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.821235	NA	NA	0.736512	0.449841	NA	0.435	NA	1.926588
1459	4	120072238	120072238	A	G	intronic	MYOZ2	NA	NA	NA	intronic	ENSG00000172399	NA	NA	NA	NA	NA	4q26	NA	NA	NA	NA	rs6828349	0.57	0.57	0.515	0.544129	0.7008	0.6141	0.6657	0.2481	0.6247	0.72	0.6	0.64	0.26	0.6482	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.412286	NA	NA	0.724756	0.321072	NA	0.587	NA	1.926244
1459	6	55381262	55381262	G	A	intronic	HMGCLL1	NA	NA	NA	intronic	ENSG00000146151	NA	NA	NA	NA	NA	6p12.1	NA	NA	NA	NA	rs6459082	0.66	0.66	0.65	0.648163	0.6938	0.5754	0.7536	0.6536	0.5941	0.7	0.57	0.73	0.65	0.6724	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.972317	NA	NA	0.707679	0.653061	NA	0.551	NA	1.926121
1460	19	6151703	6151703	C	T	intronic	ACSBG2	NA	NA	NA	intronic	ENSG00000087903,ENSG00000130377	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs7252466	0.64	0.64	0.588	0.600639	0.7028	0.6825	0.7176	0.382	0.6237	0.71	0.7	0.73	0.41	0.6986	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.515506	1.515506	NA	0.674924	0.439373	NA	0.58	NA	1.923676
1460	9	123908345	123908345	G	A	intronic	CNTRL	NA	NA	NA	intronic	ENSG00000119397	NA	NA	NA	NA	NA	9q33.2	NA	NA	NA	NA	rs7023214	0.64	0.64	0.595	0.644968	0.6968	0.7788	0.7421	0.2564	0.91	0.7	0.8	0.75	0.27	0.6934	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.742296	1.742296	NA	0.687224	0.333637	NA	0.551	NA	1.922576
1460	10	11330525	11330525	G	A	intronic	CELF2	NA	NA	NA	intronic	ENSG00000048740	NA	NA	NA	NA	NA	10p14	NA	NA	NA	NA	rs2277214	0.51	0.51	0.506	0.486222	0.7127	0.3512	0.5274	0.3464	0.5521	0.72	0.36	0.53	0.34	0.6239	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.142175	NA	NA	0.741351	0.426614	NA	0.674	NA	1.922049
1460	10	124742586	124742586	G	A	intronic	PSTK	NA	NA	NA	intronic	ENSG00000179988	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs3736585	0.59	0.59	0.601	0.581869	0.7296	0.3919	0.5591	0.6589	0.5378	0.73	0.38	0.59	0.63	0.6361	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.012505	NA	NA	0.712518	0.646308	ID=COSN163800;OCCURENCE=1(breast)	0.601	NA	1.921782
1460	13	87045827	87045827	T	C	intergenic	SLITRK6,MIR4500HG	dist=672344;dist=1050415	NA	NA	intergenic	ENSG00000214181,ENSG00000231879	dist=116303;dist=331928	NA	NA	NA	NA	13q31.1	NA	NA	NA	NA	rs9513670	0.47	0.47	0.429	0.4375	0.4652	0.7004	0.5303	0.1573	0.4509	0.47	0.67	0.52	0.19	0.4891	0.67	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.826899	NA	NA	0.457559	0.198286	NA	0.333	NA	1.9214744
1460	1	181686216	181686216	T	C	intronic	CACNA1E	NA	NA	NA	intronic	ENSG00000198216	NA	NA	NA	NA	NA	1q25.3	NA	NA	NA	NA	rs7540850	0.6	0.6	0.564	0.555112	0.6829	0.755	0.6311	0.2005	0.6431	0.69	0.78	0.58	0.27	0.6736	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.064791	NA	NA	0.723097	0.312112	NA	0.696	NA	1.920403
1460	22	25124095	25124095	C	T	intronic	PIWIL3	NA	NA	NA	intronic	ENSG00000184571	NA	NA	NA	NA	NA	22q11.23	NA	NA	NA	NA	rs738827	0.66	0.66	0.694	0.648363	0.6849	0.8254	0.4971	0.503	0.7321	0.69	0.82	0.54	0.52	0.6746	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.051371	NA	NA	0.721744	0.561961	NA	0.688	NA	1.918756
1460	1	220808921	220808921	T	C	intronic	MARK1	NA	NA	NA	intronic	ENSG00000116141	NA	NA	NA	NA	NA	1q41	NA	NA	NA	NA	rs10746403	0.69	0.69	0.688	0.705272	0.7008	0.5377	0.5836	0.9357	0.6575	0.68	0.5	0.63	0.94	0.6799	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.608706	NA	NA	0.701279	0.898547	NA	0.659	NA	1.918021
1460	12	27867706	27867706	C	T	intronic	MRPS35	NA	NA	NA	intronic	ENSG00000061794	NA	NA	NA	NA	NA	12p11.22	NA	NA	NA	NA	rs11049106	0.75	0.75	0.748	0.734625	0.7008	0.6657	0.7565	0.885	0.6217	0.69	0.69	0.77	0.89	0.6977	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.044261	NA	NA	0.683488	0.839991	NA	0.855	NA	1.918012
1460	12	133372395	133372395	A	C	intronic	GOLGA3	NA	NA	NA	intronic	ENSG00000090615	NA	NA	NA	NA	NA	12q24.33	NA	NA	NA	NA	rs4758905	0.71	0.71	0.711	0.665935	0.7087	0.8056	0.7133	0.5582	0.59	0.73	0.81	0.71	0.56	0.6914	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.254328	NA	NA	0.681977	0.561507	NA	0.601	NA	1.917923
1460	21	35284734	35284734	A	G	intronic	ATP5O	NA	NA	NA	intronic	ENSG00000241837	NA	NA	NA	NA	NA	21q22.11	NA	NA	NA	NA	rs2211873	0.68	0.68	0.696	0.702276	0.6958	0.7391	0.5591	0.736	0.727	0.67	0.7	0.6	0.74	0.6917	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.401043	NA	NA	0.695116	0.71153	NA	0.63	NA	1.917384
1460	14	64375985	64375985	G	T	intronic	SYNE2	NA	NA	NA	intronic	ENSG00000054654	NA	NA	NA	NA	NA	14q23.2	NA	NA	NA	NA	rs2275018	0.6	0.6	0.564	0.621206	0.7018	0.4782	0.6988	0.5023	0.7914	0.72	0.48	0.72	0.48	0.6805	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.583991	NA	NA	0.700488	0.534903	NA	0.717	NA	1.917212
1460	17	7474277	7474277	C	T	ncRNA_intronic	SENP3-EIF4A1	NA	NA	NA	ncRNA_intronic	ENSG00000265500	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs4968213	0.74	0.74	0.742	0.727835	0.9433	0.5615	0.6153	0.6218	0.9008	0.96	0.58	0.72	0.62	0.8558	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.354206	NA	NA	0.950396	0.716934	NA	0.797	NA	1.9171706
1460	2	113308622	113308622	C	T	intronic	POLR1B	NA	NA	NA	intronic	ENSG00000125630	NA	NA	NA	NA	NA	2q13	NA	NA	NA	NA	rs3816140	0.54	0.54	0.549	0.553115	0.6938	0.4038	0.5562	0.4992	0.6329	0.69	0.35	0.6	0.5	0.6495	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.533428	NA	NA	0.74	0.556287	NA	0.638	NA	1.9167
1460	2	220046349	220046349	G	C	intronic	FAM134A	NA	NA	NA	intronic	ENSG00000144567	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs2272017	0.48	0.48	0.455	0.461062	0.7256	0.2371	0.4769	0.3253	0.592	0.75	0.25	0.52	0.33	0.6251	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.003345	NA	NA	0.732674	0.389469	NA	0.522	NA	1.916626
1460	9	123928486	123928486	T	C	intronic	CNTRL	NA	NA	NA	intronic	ENSG00000119397	NA	NA	NA	NA	NA	9q33.2	NA	NA	NA	NA	rs2273988	0.64	0.64	0.605	0.644169	0.6938	0.7778	0.7406	0.2557	0.9121	0.69	0.8	0.75	0.26	0.7002	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.276765	2.276765	NA	0.689419	0.331366	NA	0.543	NA	1.916581
1460	10	124329746	124329746	A	T	intronic	DMBT1	NA	NA	NA	intronic	ENSG00000187908	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs3740222	0.7	0.7	0.677	0.705671	0.6789	0.7758	0.7882	0.612	0.729	0.69	0.77	0.78	0.58	0.7161	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.067301	NA	NA	0.68916	0.64168	NA	0.732	NA	1.91584
1461	4	66218728	66218728	C	T	intronic	EPHA5	NA	NA	NA	intronic	ENSG00000145242	NA	NA	NA	NA	NA	4q13.1	NA	NA	NA	NA	rs3792649	0.67	0.67	0.658	0.658746	0.7117	0.8194	0.6585	0.4357	0.7403	0.71	0.8	0.65	0.48	0.6847	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.787436	NA	NA	0.688765	0.496596	NA	0.696	NA	1.914835
1461	1	193051685	193051685	G	A	intronic	TROVE2	NA	NA	NA	intronic	ENSG00000116747	NA	NA	NA	NA	NA	1q31.2	NA	NA	NA	NA	rs2275444	0.59	0.59	0.569	0.59345	0.6849	0.4435	0.6614	0.5242	0.6994	0.68	0.44	0.68	0.55	0.6761	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.348327	NA	NA	0.724282	0.544085	NA	0.58	NA	1.914718
1461	16	23768802	23768802	T	G	intronic	CHP2	NA	NA	NA	intronic	ENSG00000166869	NA	NA	NA	NA	NA	16p12.2	NA	NA	NA	NA	rs80950	0.72	0.72	0.728	0.727236	0.7068	0.9226	0.5461	0.6188	0.8221	0.71	0.91	0.58	0.61	0.6933	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.108658	NA	NA	0.685581	0.634046	NA	0.688	NA	1.914319
1461	19	48253579	48253579	A	G	intronic	GLTSCR2	NA	NA	NA	intronic	ENSG00000105373	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs3745754	0.68	0.68	0.674	0.692891	0.6799	0.5536	0.6844	0.7844	0.7321	0.69	0.55	0.69	0.82	0.6962	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.71094	NA	NA	0.709651	0.775533	NA	0.812	NA	1.914249
1461	16	23221183	23221183	A	G	intronic	SCNN1G	NA	NA	NA	ncRNA_intronic	ENSG00000260741	NA	NA	NA	NA	NA	16p12.2	NA	NA	NA	NA	rs5740	0.81	0.81	0.768	0.783746	0.8042	0.872	0.8732	0.6135	0.8384	0.8	0.9	0.87	0.67	0.8106	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.644345	NA	NA	0.806512	0.654529	NA	0.79	NA	1.9120213
1461	4	73615956	73615956	C	T	intergenic	ADAMTS3,COX18	dist=181440;dist=304460	NA	NA	intergenic	ENSG00000156140,ENSG00000270665	dist=181440;dist=57028	NA	NA	NA	NA	4q13.3	NA	NA	NA	NA	rs1350836	0.38	0.38	0.353	0.383986	0.4742	0.4018	0.4467	0.1952	0.4836	0.47	0.38	0.41	0.22	0.4585	0.49	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.991845	NA	NA	0.488699	0.233447	NA	0.275	NA	1.9119344
1461	1	85595645	85595645	C	T	intronic	WDR63	NA	NA	NA	intronic	ENSG00000162643	NA	NA	NA	NA	NA	1p22.3	NA	NA	NA	NA	rs1020770	0.58	0.58	0.577	0.598842	0.6978	0.5685	0.6354	0.3782	0.8006	0.69	0.58	0.61	0.4	0.684	0.71	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.233128	NA	NA	0.706744	0.427145	NA	0.645	NA	1.911456
1461	1	103444679	103444679	T	G	intronic	COL11A1	NA	NA	NA	intronic	ENSG00000060718	NA	NA	NA	NA	NA	1p21.1	NA	NA	NA	NA	rs11164649	0.64	0.64	0.6	0.629193	0.7018	0.9127	0.6916	0.1717	0.8364	0.71	0.91	0.72	0.18	0.6912	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.447448	NA	NA	0.69593	0.270086	NA	0.667	NA	1.91107
1461	1	236724605	236724605	G	T	intronic	HEATR1	NA	NA	NA	intronic	ENSG00000119285	NA	NA	NA	NA	NA	1q43	NA	NA	NA	NA	rs1077438	0.62	0.62	0.603	0.578674	0.7078	0.6538	0.621	0.4493	0.5133	0.7	0.66	0.63	0.46	0.663	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.092158	NA	NA	0.719586	0.499773	NA	0.667	NA	1.909614
1461	12	10271055	10271055	T	C	UTR3	CLEC7A	NM_022570:c.*2A>G,NM_197950:c.*2A>G,NM_197949:c.*57A>G,NM_197948:c.*57A>G,NM_197947:c.*2A>G	NA	NA	UTR3	ENSG00000172243	ENST00000529761:c.*2A>G,ENST00000353231:c.*2A>G,ENST00000298523:c.*57A>G,ENST00000396484:c.*2A>G,ENST00000304084:c.*2A>G	NA	NA	NA	NA	12p13.2	NA	NA	NA	NA	rs7959451	0.67	0.67	0.677	0.640575	0.835	0.3056	0.6599	0.8699	0.4622	0.82	0.3	0.68	0.85	0.7415	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.002202	NA	NA	0.850814	0.87744	ID=COSN164166;OCCURENCE=1(breast)	0.79	NA	1.9060194
1461	10	97397227	97397227	T	C	intronic	ALDH18A1	NA	NA	NA	intronic	ENSG00000059573	NA	NA	NA	NA	NA	10q24.1	NA	NA	NA	NA	rs2275273	0.66	0.66	0.633	0.642572	0.6909	0.749	0.7147	0.5378	0.5736	0.7	0.75	0.7	0.49	0.6862	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.212713	NA	NA	0.717093	0.568316	NA	0.58	NA	1.905807
1461	17	10549184	10549184	G	A	intronic	MYH3	NA	NA	NA	intronic	ENSG00000109063	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs2239933	0.5	0.5	0.493	0.464257	0.7584	0.375	0.5346	0.2383	0.5092	0.74	0.36	0.52	0.27	0.6073	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.266238	NA	NA	0.728605	0.294144	NA	0.609	NA	1.905695
1461	17	10555028	10555028	G	A	intronic	MYH3	NA	NA	NA	intronic	ENSG00000109063	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs2285466	0.5	0.5	0.472	0.464058	0.7584	0.375	0.5346	0.2375	0.5092	0.74	0.36	0.52	0.27	0.6076	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.414112	NA	NA	0.728605	0.294144	NA	0.565	NA	1.905395
1462	17	10535761	10535761	G	A	intronic	MYH3	NA	NA	NA	intronic	ENSG00000109063	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs4792008	0.5	0.5	0.473	0.466853	0.7584	0.3849	0.5346	0.2398	0.5102	0.74	0.37	0.52	0.27	0.6095	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.644251	NA	NA	0.727674	0.295279	NA	0.616	NA	1.904426
1462	1	160151450	160151450	T	C	intronic	ATP1A4	NA	NA	NA	intronic	ENSG00000132681	NA	NA	NA	NA	NA	1q23.2	NA	NA	NA	NA	rs7519748	0.8	0.8	0.801	0.805511	0.6909	0.8889	0.7954	0.8941	0.7249	0.68	0.89	0.78	0.92	0.733	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.002678	NA	NA	0.674651	0.860418	NA	0.797	NA	1.901449
1462	11	20404506	20404506	T	C	intronic	HTATIP2	NA	NA	NA	intronic	ENSG00000109854	NA	NA	NA	NA	NA	11p15.1	NA	NA	NA	NA	rs2403587	0.58	0.58	NA	0.462061	0.5268	0.3671	0.4769	0.4327	0.5225	0.71	0.41	0.65	0.52	0.6569	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.291046	NA	NA	0.914958	0.663785	NA	0.71	NA	1.901342
1462	1	151019180	151019180	A	G	UTR3	BNIPL	NM_001159642:c.*17A>G,NM_138278:c.*17A>G	NA	NA	UTR3	ENSG00000163141	ENST00000368931:c.*17A>G,ENST00000295294:c.*17A>G,ENST00000361277:c.*17A>G	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs6587553	0.81	0.81	0.804	0.811502	0.8111	0.9077	0.8228	0.7118	0.8395	0.81	0.91	0.83	0.69	0.813	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.078103	3.078103	NA	0.808488	0.718112	NA	0.746	NA	1.9007454
1462	3	190341241	190341241	C	A	intronic	IL1RAP	NA	NA	NA	intronic	ENSG00000196083	NA	NA	NA	NA	NA	3q28	NA	NA	NA	NA	rs4687160	0.67	0.67	0.657	0.652955	0.6849	0.8125	0.6354	0.4894	0.6892	0.69	0.78	0.66	0.51	0.7034	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.035082	NA	NA	0.714302	0.550159	NA	0.659	NA	1.897398
1462	14	94097287	94097287	G	A	intronic	UNC79	NA	NA	NA	intronic	ENSG00000133958	NA	NA	NA	NA	NA	14q32.12	NA	NA	NA	NA	rs2148563	0.66	0.66	0.656	0.679712	0.7167	0.3859	0.7305	0.8623	0.6616	0.72	0.39	0.76	0.81	0.6814	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.104275	NA	NA	0.704535	0.839083	NA	0.732	NA	1.897365
1462	2	121744225	121744225	A	G	intronic	GLI2	NA	NA	NA	intronic	ENSG00000074047	NA	NA	NA	NA	NA	2q14.2	NA	NA	NA	NA	rs2276553	0.57	0.57	0.575	0.519569	0.7276	0.4921	0.5865	0.3744	0.4826	0.72	0.52	0.6	0.38	0.641	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.73816	NA	NA	0.734589	0.425329	NA	0.63	NA	1.896811
1462	20	3673815	3673815	A	G	intronic	SIGLEC1	NA	NA	NA	intronic	ENSG00000088827	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs2474436	0.78	0.78	0.755	0.803115	0.6829	0.8621	0.7219	0.907	0.7832	0.7	0.85	0.69	0.88	0.7429	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.283398	NA	NA	0.678605	0.874595	NA	0.804	NA	1.895595
1463	9	101814626	101814626	C	G	intronic	COL15A1	NA	NA	NA	intronic	ENSG00000204291	NA	NA	NA	NA	NA	9q22.33	NA	NA	NA	NA	rs4142986	0.84	0.84	0.851	0.848442	0.6859	0.9087	0.8184	0.9879	0.7863	0.72	0.92	0.79	0.97	0.7478	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.086146	NA	NA	0.672791	0.946891	NA	0.819	NA	1.893509
1463	12	10532111	10532111	T	G	intronic	KLRC4-KLRK1,KLRK1	NA	NA	NA	ncRNA_intronic	ENSG00000245648	NA	NA	NA	NA	NA	12p13.2	NA	NA	NA	NA	rs2255353	0.76	0.76	0.739	0.76238	0.8171	0.7857	0.8401	0.553	0.91	0.82	0.82	0.81	0.59	0.8188	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.77049	NA	NA	0.804073	0.59267	NA	0.623	NA	1.8933603
1463	14	75278302	75278302	G	A	intronic	YLPM1	NA	NA	NA	intronic	ENSG00000119596	NA	NA	NA	NA	NA	14q24.3	NA	NA	NA	NA	rs8022046	0.72	0.72	0.738	0.727636	0.7048	0.7976	0.7594	0.6891	0.7086	0.7	0.77	0.72	0.68	0.7084	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.770488	NA	NA	0.693805	0.697484	NA	0.819	NA	1.892995
1463	10	126185618	126185618	A	G	intronic	LHPP	NA	NA	NA	intronic	ENSG00000107902	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs3824810	0.7	0.7	0.696	0.728435	0.6918	0.5913	0.6816	0.8185	0.819	0.7	0.61	0.7	0.81	0.7245	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.0055	NA	NA	0.69093	0.775533	NA	0.652	NA	1.89277
1463	10	22193422	22193422	T	C	intronic	DNAJC1	NA	NA	NA	intronic	ENSG00000136770	NA	NA	NA	NA	NA	10p12.31	NA	NA	NA	NA	rs792455	0.73	0.73	0.722	0.717851	0.6889	0.9821	0.6499	0.5212	0.7894	0.69	0.99	0.66	0.54	0.7286	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.672637	NA	NA	0.689804	0.549591	NA	0.565	NA	1.892696
1463	12	10532434	10532434	A	G	intronic	KLRC4-KLRK1,KLRK1	NA	NA	NA	ncRNA_exonic	ENSG00000245648	NA	NA	NA	NA	NA	12p13.2	NA	NA	NA	NA	rs2617151	0.82	0.82	0.816	0.824281	0.8171	0.7857	0.8746	0.7693	0.91	0.82	0.82	0.85	0.81	0.8245	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.07566	NA	NA	0.799209	0.761136	NA	0.732	NA	1.8925243
1463	1	7811215	7811215	A	G	intronic	CAMTA1	NA	NA	NA	intronic	ENSG00000171735	NA	NA	NA	NA	NA	1p36.23	NA	NA	NA	NA	rs10779689	0.64	0.64	0.6	0.616014	0.7167	0.4881	0.7882	0.5968	0.5481	0.72	0.49	0.74	0.64	0.6825	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.070881	NA	NA	0.711047	0.627326	NA	0.558	NA	1.889753
1463	19	49459104	49459104	A	G	intronic	BAX	NA	NA	NA	intronic	ENSG00000087088	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs1805419	0.64	0.64	0.641	0.621805	0.7157	0.5873	0.5879	0.5847	0.635	0.69	0.63	0.61	0.58	0.6744	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.06759	3.06759	NA	0.720349	0.593509	NA	0.717	NA	1.889551
1463	2	79312414	79312414	G	A	intronic	REG1B	NA	NA	NA	intronic	ENSG00000172023	NA	NA	NA	NA	NA	2p12	NA	NA	NA	NA	rs3739144	0.64	0.64	0.62	0.638578	0.7117	0.6558	0.7752	0.5477	0.5716	0.71	0.62	0.72	0.49	0.6822	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.214921	NA	NA	0.717558	0.58965	ID=COSM148882;OCCURENCE=1(stomach)	0.674	NA	1.888542
1463	1	220207017	220207017	C	T	ncRNA_intronic	RNU5F-1	NA	NA	NA	intronic	ENSG00000136628	NA	NA	NA	NA	NA	1q41	NA	NA	NA	NA	rs2647456	0.88	0.88	0.899	0.899161	0.7932	0.9405	0.8732	0.9902	0.8609	0.79	0.94	0.85	0.98	0.8438	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.282294	NA	NA	0.80907	0.95665	NA	0.891	NA	1.8872633
1463	6	159188128	159188128	A	G	intronic	EZR	NA	NA	NA	intronic	ENSG00000092820	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs2242318	0.52	0.52	0.501	0.522963	0.7376	0.2153	0.4337	0.5605	0.6319	0.75	0.18	0.5	0.56	0.6369	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.618733	NA	NA	0.738256	0.618702	NA	0.522	NA	1.887244
1463	1	220160433	220160433	A	G	ncRNA_intronic	RNU5F-1	NA	NA	NA	intronic	ENSG00000136628	NA	NA	NA	NA	NA	1q41	NA	NA	NA	NA	rs2647434	0.88	0.88	0.895	0.895966	0.7952	0.9474	0.8732	0.9902	0.8354	0.79	0.95	0.85	0.98	0.843	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.811579	NA	NA	0.809025	0.957104	NA	0.877	NA	1.8861083
1463	11	69999122	69999122	A	C	intronic	ANO1	NA	NA	NA	intronic	ENSG00000131620	NA	NA	NA	NA	NA	11q13.3	NA	NA	NA	NA	rs10160639	0.72	0.72	0.727	0.689696	0.6978	0.7718	0.6527	0.6868	0.6268	0.72	0.79	0.66	0.68	0.7072	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.709017	NA	NA	0.708917	0.701655	NA	0.696	NA	1.886083
1463	10	26443646	26443646	G	A	intronic	MYO3A	NA	NA	NA	intronic	ENSG00000095777	NA	NA	NA	NA	NA	10p12.1	NA	NA	NA	NA	rs3818956	0.7	0.7	0.71	0.682708	0.7276	0.6359	0.7118	0.708	0.6299	0.73	0.68	0.68	0.67	0.696	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.261474	NA	NA	0.691163	0.708579	NA	0.703	NA	1.885237
1464	17	81051007	81051007	G	T	intronic	METRNL	NA	NA	NA	intronic	ENSG00000176845	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs7502442	0.61	0.61	0.65	0.609425	0.7217	0.4633	0.5389	0.6399	0.6534	0.72	0.41	0.58	0.69	0.6743	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.219622	NA	NA	0.722261	0.626476	NA	0.638	NA	1.881739
1464	1	57185818	57185818	A	G	intronic	C1orf168	NA	NA	NA	intronic	ENSG00000187889	NA	NA	NA	NA	NA	1p32.2	NA	NA	NA	NA	rs857141	0.79	0.79	0.81	0.832668	0.669	0.8254	0.7954	0.9811	0.8344	0.68	0.82	0.77	0.96	0.7565	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.302545	NA	NA	0.693492	0.937045	NA	0.797	NA	1.881008
1464	6	27435707	27435707	G	A	intronic	ZNF184	NA	NA	NA	intronic	ENSG00000096654	NA	NA	NA	NA	NA	6p22.1	NA	NA	NA	NA	rs2272814	0.62	0.62	0.613	0.638778	0.7147	0.5774	0.7017	0.5401	0.7127	0.71	0.55	0.68	0.52	0.687	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.472597	NA	NA	0.717791	0.558103	NA	0.667	NA	1.880509
1464	16	28925978	28925978	T	C	intronic	RABEP2	NA	NA	NA	intronic	ENSG00000177548	NA	NA	NA	NA	NA	16p11.2	NA	NA	NA	NA	rs3924376	0.8	0.8	0.814	0.823283	0.7187	0.8839	0.5418	0.9917	0.8405	0.72	0.87	0.64	0.99	0.719	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.777012	NA	NA	0.684517	0.929373	NA	0.87	NA	1.877783
1464	3	195487737	195487737	A	G	intronic	MUC4	NA	NA	NA	intronic	ENSG00000145113	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs2246771	0.7	0.7	0.723	0.691294	0.7157	0.7798	0.5994	0.7186	0.6033	0.72	0.74	0.59	0.72	0.6921	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.615667	NA	NA	0.714419	0.722197	NA	0.652	NA	1.877781
1464	22	26222505	26222505	G	A	intronic	MYO18B	NA	NA	NA	intronic	ENSG00000133454	NA	NA	NA	NA	NA	22q12.1	NA	NA	NA	NA	rs2331162	0.58	0.58	0.56	0.572484	0.7157	0.6696	0.6513	0.2345	0.726	0.69	0.68	0.64	0.25	0.6788	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.435322	NA	NA	0.727986	0.332992	NA	0.529	NA	1.877514
1464	14	22280199	22280199	C	T	intergenic	OR4E2,DAD1	dist=145961;dist=753608	NA	NA	downstream	ENSG00000211783	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs2733773	0.46	0.46	0.443	0.414936	0.5746	0.3363	0.4308	0.3585	0.3967	0.58	0.36	0.46	0.38	0.4996	0.58	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.712639	NA	NA	0.548814	0.346391	NA	0.442	NA	1.876986
1464	6	30553871	30553871	C	T	intronic	ABCF1	NA	NA	NA	intronic	ENSG00000204574	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs1264437	0.72	0.72	0.741	0.752596	0.6988	0.6706	0.6268	0.8449	0.8569	0.71	0.71	0.62	0.81	0.7262	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.038388	NA	NA	0.699721	0.837119	NA	0.768	NA	1.875279
1465	1	220156090	220156090	T	C	ncRNA_intronic	RNU5F-1	NA	NA	NA	intronic	ENSG00000136628	NA	NA	NA	NA	NA	1q41	NA	NA	NA	NA	rs2647462	0.84	0.84	0.841	0.836462	0.8111	0.9216	0.804	0.7995	0.8476	0.81	0.92	0.8	0.82	0.8259	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.022927	NA	NA	0.821628	0.794371	NA	0.848	NA	1.8747053
1465	7	38782951	38782951	G	A	intronic	VPS41	NA	NA	NA	intronic	ENSG00000006715	NA	NA	NA	NA	NA	7p14.1	NA	NA	NA	NA	rs10254567	0.64	0.64	0.627	0.557109	0.7167	0.5565	0.8055	0.4501	0.362	0.72	0.56	0.78	0.49	0.6687	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.956265	NA	NA	0.740056	0.519746	NA	0.681	NA	1.874544
1465	2	17773524	17773524	G	A	intronic	VSNL1	NA	NA	NA	intronic	ENSG00000163032	NA	NA	NA	NA	NA	2p24.2	NA	NA	NA	NA	rs2680827	0.7	0.7	0.647	0.704273	0.6918	0.9881	0.7046	0.3691	0.8773	0.69	0.98	0.69	0.38	0.735	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.130654	NA	NA	0.698721	0.443259	NA	0.638	NA	1.874479
1465	5	180041208	180041208	T	C	intronic	FLT4	NA	NA	NA	intronic	ENSG00000037280	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs659268	0.67	0.67	0.605	0.671925	0.7266	0.5784	0.7954	0.6301	0.681	0.73	0.55	0.74	0.67	0.6967	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.223799	NA	NA	0.702674	0.638675	NA	0.087	NA	1.874026
1465	18	5433570	5433570	A	C	intronic	EPB41L3	NA	NA	NA	intronic	ENSG00000082397	NA	NA	NA	NA	NA	18p11.31	NA	NA	NA	NA	rs2272130	0.56	0.56	0.505	0.514976	0.7296	0.5685	0.6744	0.1974	0.5552	0.74	0.6	0.66	0.17	0.669	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.758211	NA	NA	0.727907	0.286428	NA	0.58	NA	1.873493
1465	1	111770423	111770423	T	G	intronic	CHI3L2	NA	NA	NA	intronic	ENSG00000064886	NA	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	rs755467	0.68	0.68	0.666	0.690895	0.6978	0.6716	0.683	0.6657	0.7434	0.7	0.65	0.7	0.68	0.7132	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.724206	NA	NA	0.71593	0.658874	NA	0.623	NA	1.87307
1465	10	6261704	6261704	T	C	intronic	PFKFB3	NA	NA	NA	intronic	ENSG00000170525	NA	NA	NA	NA	NA	10p15.1	NA	NA	NA	NA	rs1557111	0.71	0.71	0.687	0.678914	0.7237	0.7381	0.6729	0.6952	0.5542	0.73	0.72	0.66	0.71	0.6894	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.272813	NA	NA	0.713837	0.692011	NA	0.623	NA	1.873063
1465	8	95952477	95952477	A	G	intronic	TP53INP1	NA	NA	NA	intronic	ENSG00000156170,ENSG00000164938	NA	NA	NA	NA	NA	8q22.1	NA	NA	NA	NA	rs2956210	0.68	0.68	0.667	0.677915	0.7237	0.7808	0.6873	0.5174	0.7352	0.74	0.75	0.69	0.52	0.7017	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.731735	NA	NA	0.70287	0.546538	NA	0.732	NA	1.87173
1465	15	40558744	40558744	G	A	intronic	PAK6	NA	NA	NA	intronic	ENSG00000137843,ENSG00000259288	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs748556	0.54	0.54	0.542	0.506989	0.7356	0.3353	0.4971	0.4539	0.5276	0.74	0.32	0.54	0.48	0.6465	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.978509	NA	NA	0.749243	0.51549	NA	0.449	NA	1.868657
1465	17	42855472	42855472	T	C	intronic	ADAM11	NA	NA	NA	intronic	ENSG00000073670	NA	NA	NA	NA	NA	17q21.31	NA	NA	NA	NA	rs2070604	0.68	0.68	0.651	0.669529	0.7445	0.7708	0.7233	0.4516	0.7444	0.74	0.78	0.7	0.46	0.6946	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.207446	NA	NA	0.693605	0.518838	NA	0.725	NA	1.867295
1465	16	19505730	19505730	T	C	intronic	TMC5	NA	NA	NA	intronic	ENSG00000103534	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs2245423	0.55	0.55	0.487	0.565495	0.7187	0.4623	0.5288	0.3979	0.7669	0.74	0.43	0.55	0.38	0.6819	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.475767	NA	NA	0.732147	0.441056	NA	0.37	NA	1.867253
1465	16	75148604	75148604	G	A	intronic	LDHD	NA	NA	NA	intronic	ENSG00000166816	NA	NA	NA	NA	NA	16q23.1	NA	NA	NA	NA	rs755099	0.44	0.44	0.42	0.396166	0.7276	0.1776	0.5072	0.2519	0.3967	0.73	0.16	0.56	0.23	0.6598	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.704698	1.704698	NA	0.745721	0.370856	NA	0.536	NA	1.866879
1465	12	120750239	120750239	A	G	intronic	SIRT4	NA	NA	NA	intronic	ENSG00000089163	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs2261612	0.65	0.65	0.643	0.684904	0.7157	0.495	0.781	0.6974	0.7638	0.72	0.48	0.75	0.69	0.7054	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.463744	NA	NA	0.712209	0.720608	NA	0.725	NA	1.866691
1465	8	105367096	105367096	T	C	intronic	DCSTAMP	NA	NA	NA	intronic	ENSG00000164935	NA	NA	NA	NA	NA	8q22.3	NA	NA	NA	NA	rs2458431	0.6	0.6	0.569	0.594649	0.7336	0.5536	0.7176	0.3903	0.683	0.72	0.56	0.69	0.39	0.6841	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.904571	2.904571	NA	0.715748	0.421925	NA	0.601	NA	1.866552
1465	1	20977221	20977221	A	T	UTR3	PINK1	NM_032409:c.*37A>T	NA	NA	ncRNA_exonic	ENSG00000117242	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs686658	0.84	0.84	0.827	0.834465	0.8917	0.8165	0.8112	0.7844	0.8783	0.88	0.82	0.85	0.79	0.8639	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.879422	NA	NA	0.879274	0.802769	NA	0.819	NA	1.865126
1466	10	118646129	118646129	G	C	intronic	KIAA1598	NA	NA	NA	intronic	ENSG00000187164,ENSG00000188316	NA	NA	NA	NA	NA	10q25.3	NA	NA	NA	NA	rs2531685	0.53	0.53	0.486	0.506589	0.7346	0.4474	0.6066	0.2171	0.6534	0.72	0.45	0.7	0.22	0.66	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.614106	NA	NA	0.74058	0.288998	NA	0.536	NA	1.86482
1466	15	28200408	28200408	T	C	intronic	OCA2	NA	NA	NA	intronic	ENSG00000104044	NA	NA	NA	NA	NA	15q13.1	NA	NA	NA	NA	rs7170989	0.45	0.45	0.396	0.428714	0.7505	0.1518	0.5288	0.323	0.455	0.75	0.11	0.55	0.31	0.6203	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.330808	NA	NA	0.765698	0.388334	NA	0.442	NA	1.863502
1466	16	19503598	19503598	C	T	intronic	TMC5	NA	NA	NA	intronic	ENSG00000103534	NA	NA	NA	NA	NA	16p12.3	NA	NA	NA	NA	rs1475962	0.55	0.55	0.52	0.564896	0.7187	0.4593	0.5288	0.3979	0.7669	0.74	0.43	0.55	0.38	0.6823	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.269245	NA	NA	0.737907	0.449477	NA	0.37	NA	1.861093
1466	6	2834265	2834265	C	T	intronic	SERPINB1	NA	NA	NA	intronic	ENSG00000021355	NA	NA	NA	NA	NA	6p25.2	NA	NA	NA	NA	rs386915	0.7	0.7	0.686	0.709665	0.7058	0.747	0.7954	0.6218	0.7331	0.7	0.74	0.78	0.59	0.7109	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.629485	NA	NA	0.722992	0.672535	NA	0.681	NA	1.860308
1466	15	60724118	60724118	C	G	intronic	NARG2	NA	NA	NA	intronic	ENSG00000128915	NA	NA	NA	NA	NA	15q22.2	NA	NA	NA	NA	rs12437617	0.68	0.68	0.635	0.678914	0.7117	0.9157	0.7406	0.3222	0.8395	0.7	0.94	0.73	0.33	0.7244	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.999962	NA	NA	0.703993	0.365481	NA	0.514	NA	1.859907
1466	9	135979751	135979751	C	G	intronic	RALGDS	NA	NA	NA	intronic	ENSG00000160271	NA	NA	NA	NA	NA	9q34.2	NA	NA	NA	NA	rs598499	0.74	0.74	0.733	0.76877	0.7038	0.8433	0.6671	0.7262	0.8885	0.71	0.83	0.65	0.74	0.7404	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.86494	NA	NA	0.696512	0.727644	NA	0.775	NA	1.859288
1466	6	2685677	2685677	T	C	intronic	MYLK4	NA	NA	NA	intronic	ENSG00000145949	NA	NA	NA	NA	NA	6p25.2	NA	NA	NA	NA	rs966232	0.79	0.79	0.772	0.807508	0.7038	0.8968	0.8689	0.795	0.7955	0.69	0.9	0.84	0.78	0.7488	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.193595	NA	NA	0.689884	0.797549	NA	0.746	NA	1.857516
1466	19	9003706	9003706	T	G	intronic	MUC16	NA	NA	NA	intronic	ENSG00000181143	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs11085778	0.63	0.63	0.584	0.602236	0.7177	0.6071	0.7248	0.3941	0.6728	0.7	0.67	0.72	0.44	0.6881	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.778521	NA	NA	0.73719	0.480964	NA	0.551	NA	1.85701
1466	1	220145371	220145371	T	G	ncRNA_intronic	RNU5F-1	NA	NA	NA	intronic	ENSG00000136628	NA	NA	NA	NA	NA	1q41	NA	NA	NA	NA	rs2795315	0.88	0.88	0.893	0.890176	0.8121	0.9216	0.8256	0.9902	0.8487	0.81	0.92	0.82	0.98	0.8425	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.813071	1.813071	NA	0.822919	0.959318	NA	0.833	NA	1.8558143
1467	17	67178954	67178954	C	T	intronic	ABCA10	NA	NA	NA	intronic	ENSG00000154263	NA	NA	NA	NA	NA	17q24.3	NA	NA	NA	NA	rs4968851	0.65	0.65	0.621	0.685703	0.7306	0.4742	0.7767	0.764	0.6871	0.72	0.43	0.74	0.74	0.7031	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.742739	NA	NA	0.713488	0.763504	NA	0.63	NA	1.852812
1467	13	50054346	50054346	G	T	intronic	SETDB2	NA	NA	NA	intronic	ENSG00000136169	NA	NA	NA	NA	NA	13q14.2	NA	NA	NA	NA	rs7996852	0.82	0.82	0.815	0.820487	0.6899	0.873	0.7839	0.9675	0.728	0.7	0.87	0.8	0.95	0.7572	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.366229	NA	NA	0.70186	0.932365	NA	0.804	NA	1.85104
1467	7	1522175	1522175	A	G	intronic	INTS1	NA	NA	NA	intronic	ENSG00000164880	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs10224038	0.8	0.8	0.824	0.786741	0.7276	0.746	0.7695	0.9871	0.6309	0.73	0.76	0.76	0.98	0.7313	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.104458	NA	NA	0.690294	0.932598	NA	0.551	NA	1.850806
1467	11	20959429	20959429	T	C	intronic	NELL1	NA	NA	NA	intronic	ENSG00000165973	NA	NA	NA	NA	NA	11p15.1	NA	NA	NA	NA	rs1880087	0.58	0.58	0.535	0.563898	0.7445	0.5595	0.6974	0.2511	0.7106	0.74	0.58	0.68	0.26	0.6768	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.004773	NA	NA	0.727907	0.330005	NA	0.623	NA	1.850793
1467	11	117064693	117064693	C	G	intronic	SIDT2	NA	NA	NA	intronic	ENSG00000149577	NA	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs521171	0.53	0.53	0.507	0.48143	0.7376	0.376	0.634	0.3404	0.409	0.72	0.37	0.64	0.33	0.648	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.328048	NA	NA	0.763966	0.425034	NA	0.558	NA	1.850434
1467	10	121435955	121435955	A	C	intronic	BAG3	NA	NA	NA	intronic	ENSG00000151929	NA	NA	NA	NA	NA	10q26.11	NA	NA	NA	NA	rs196294	0.66	0.66	0.645	0.635184	0.7485	0.4633	0.6931	0.7216	0.5378	0.75	0.48	0.74	0.68	0.6767	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.218965	NA	NA	0.724471	0.711757	NA	0.761	NA	1.850329
1467	13	50054308	50054308	G	A	intronic	SETDB2	NA	NA	NA	intronic	ENSG00000136169	NA	NA	NA	NA	NA	13q14.2	NA	NA	NA	NA	rs4142285	0.82	0.82	0.815	0.820687	0.6909	0.873	0.7839	0.9675	0.728	0.7	0.87	0.8	0.95	0.7572	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.783811	NA	NA	0.701744	0.932365	NA	0.804	NA	1.850156
1467	19	9002113	9002113	A	G	intronic	MUC16	NA	NA	NA	intronic	ENSG00000181143	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs12462672	0.63	0.63	0.607	0.602236	0.7177	0.6071	0.7248	0.3941	0.6728	0.7	0.67	0.72	0.44	0.6924	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.292468	NA	NA	0.740232	0.486396	NA	0.551	NA	1.849668
1467	19	15273248	15273248	A	C	intronic	NOTCH3	NA	NA	NA	exonic	ENSG00000074181	NA	unknown	UNKNOWN	NA	NA	19p13.12	NA	NA	NA	NA	rs4809029	0.87	0.87	0.878	0.870407	0.8817	0.8016	0.7622	0.9871	0.8487	0.88	0.8	0.79	0.98	0.8736	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.492881	NA	NA	0.896512	0.977077	NA	0.572	NA	1.848188
1467	14	21624197	21624197	T	C	upstream	OR5AU1	NA	NA	NA	UTR5	ENSG00000169327	ENST00000304418:c.-13A>G	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs10135366	0.56	0.56	0.52	0.561502	0.7316	0.4325	0.6527	0.3351	0.7607	0.73	0.41	0.7	0.38	0.6654	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.601612	NA	NA	0.754884	0.406718	NA	0.572	NA	1.848116
1467	8	144332012	144332012	T	C	UTR5	ZFP41	NM_001271156:c.-2T>C,NM_173832:c.-2T>C	NA	NA	UTR5	ENSG00000181638,ENSG00000264668	ENST00000520584:c.-2T>C,ENST00000330701:c.-2T>C;ENST00000522452:c.-2T>C	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs6558339	0.85	0.85	0.862	0.86881	0.83	0.8482	0.8934	0.8593	0.9254	0.82	0.87	0.88	0.87	0.8451	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.373966	NA	NA	0.810305	0.855878	NA	0.891	NA	1.8479284
1467	19	14867186	14867186	G	A	intronic	EMR2	NA	NA	NA	intronic	ENSG00000127507	NA	NA	NA	NA	NA	19p13.12	NA	NA	NA	NA	rs2524386	0.76	0.76	0.751	0.79353	0.7187	0.8214	0.6499	0.8563	0.8589	0.73	0.78	0.65	0.85	0.7327	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.032094	NA	NA	0.702326	0.839537	NA	0.717	NA	1.846274
1467	20	2644407	2644407	C	G	intronic	IDH3B	NA	NA	NA	intronic	ENSG00000101365	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs2073193	0.63	0.63	0.628	0.613019	0.7425	0.623	0.7176	0.444	0.6237	0.74	0.64	0.7	0.42	0.6865	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.495476	NA	NA	0.725116	0.513164	NA	0.587	NA	1.845884
1467	2	79314094	79314094	G	T	intronic	REG1B	NA	NA	NA	intronic	ENSG00000172023	NA	NA	NA	NA	NA	2p12	NA	NA	NA	NA	rs6723688	0.67	0.67	0.647	0.666933	0.7247	0.6974	0.7824	0.6067	0.5757	0.72	0.66	0.73	0.57	0.6985	0.73	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.846804	NA	NA	0.731279	0.642079	NA	0.696	NA	1.845521
1468	11	106408071	106408071	C	T	intergenic	AASDHPPT,GUCY1A2	dist=438652;dist=136667	NA	NA	intergenic	ENSG00000255065,ENSG00000260512	dist=225553;dist=136667	NA	NA	NA	NA	11q22.3	NA	NA	NA	NA	rs1791468	0.52	0.52	0.473	0.507588	0.4831	0.622	0.4755	0.4455	0.5215	0.48	0.63	0.47	0.47	0.5137	0.63	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.155111	NA	NA	0.493213	0.427835	NA	0.478	NA	1.8433204
1468	17	78081551	78081551	T	C	intronic	GAA	NA	NA	NA	intronic	ENSG00000171298	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs2304845	0.6	0.6	0.566	0.601038	0.7515	0.5437	0.5403	0.5174	0.6616	0.74	0.57	0.54	0.48	0.6741	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.153199	NA	NA	0.731471	0.531421	NA	0.616	NA	1.842929
1468	19	51883727	51883727	G	A	intronic	LIM2	NA	NA	NA	intronic	ENSG00000105370	NA	NA	NA	NA	NA	19q13.41	NA	NA	NA	NA	rs2547318	0.78	0.78	0.799	0.767372	0.7087	0.7123	0.7032	0.9818	0.6401	0.72	0.74	0.71	0.98	0.7312	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.123845	NA	NA	0.717674	0.942124	NA	0.826	NA	1.842426
1468	2	190611084	190611084	T	C	intronic	ANKAR	NA	NA	NA	intronic	ENSG00000151687	NA	NA	NA	NA	NA	2q32.2	NA	NA	NA	NA	rs13002216	0.6	0.6	0.578	0.573083	0.7286	0.7302	0.6974	0.1339	0.7566	0.75	0.72	0.68	0.18	0.6916	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.205075	3.205075	NA	0.73866	0.222172	NA	0.514	NA	1.84114
1468	17	67170736	67170736	A	G	intronic	ABCA10	NA	NA	NA	intronic	ENSG00000154263	NA	NA	NA	NA	NA	17q24.3	NA	NA	NA	NA	rs740520	0.65	0.65	0.657	0.707668	0.7316	0.4742	0.7839	0.8427	0.6871	0.71	0.42	0.73	0.78	0.713	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.661635	NA	NA	0.715317	0.831967	NA	0.696	NA	1.840083
1468	7	107800953	107800953	A	G	intronic	NRCAM	NA	NA	NA	intronic	ENSG00000091129	NA	NA	NA	NA	NA	7q31.1	NA	NA	NA	NA	rs12670313	0.63	0.63	0.571	0.580671	0.7396	0.8373	0.7478	0.1619	0.6002	0.74	0.82	0.75	0.16	0.6824	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.321655	NA	NA	0.738488	0.281434	NA	0.514	NA	1.839512
1468	2	190640475	190640475	A	G	intronic	ORMDL1	NA	NA	NA	intronic	ENSG00000128699	NA	NA	NA	NA	NA	2q32.2	NA	NA	NA	NA	rs3816196	0.61	0.61	0.597	0.583666	0.7286	0.7312	0.6988	0.1732	0.7556	0.75	0.72	0.68	0.24	0.6936	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.467633	NA	NA	0.738953	0.248071	NA	0.536	NA	1.838847
1468	14	58771632	58771632	A	G	intronic	ARID4A	NA	NA	NA	intronic	ENSG00000032219	NA	NA	NA	NA	NA	14q23.1	NA	NA	NA	NA	rs7155580	0.65	0.65	0.673	0.682308	0.7386	0.4097	0.6931	0.8389	0.6861	0.72	0.38	0.71	0.83	0.694	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.194995	2.194995	NA	0.730841	0.80495	ID=COSN164690;OCCURENCE=1(breast)	0.681	NA	1.836559
1468	6	31856070	31856070	G	A	intronic	EHMT2	NA	NA	NA	intronic	ENSG00000204371	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs486416	0.8	0.8	0.811	0.823682	0.7217	0.7758	0.8991	0.8888	0.8364	0.7	0.83	0.9	0.87	0.7691	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.179368	NA	NA	0.67368	0.848143	NA	0.819	NA	1.83552
1468	17	78079509	78079509	T	G	intronic	GAA	NA	NA	NA	intronic	ENSG00000171298	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs12452721	0.61	0.61	0.606	0.605631	0.7535	0.5437	0.5418	0.5234	0.6738	0.75	0.57	0.55	0.5	0.6758	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.483425	NA	NA	0.735233	0.540172	NA	0.645	NA	1.835467
1469	12	6635567	6635567	A	T	intronic	NCAPD2	NA	NA	NA	intronic	ENSG00000010292	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs7311174	0.79	0.79	0.789	0.799521	0.7127	0.7034	0.8256	0.9811	0.7239	0.72	0.71	0.81	0.98	0.7463	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.065192	NA	NA	0.706744	0.939174	NA	0.819	NA	1.834256
1469	1	26648551	26648551	G	C	intronic	AIM1L	NA	NA	NA	intronic	ENSG00000176092	NA	NA	NA	NA	NA	1p36.11	NA	NA	NA	NA	rs11247913	0.6	0.6	0.607	0.559704	0.7346	0.4405	0.5749	0.5537	0.5	0.72	0.45	0.6	0.58	0.6672	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.926802	NA	NA	0.764535	0.597367	NA	0.63	NA	1.833665
1469	15	86313048	86313048	T	C	UTR5	KLHL25	NM_022480:c.-7A>G	NA	NA	UTR5	ENSG00000183655	ENST00000337975:c.-7A>G,ENST00000536947:c.-7A>G	NA	NA	NA	NA	15q25.3	NA	NA	NA	NA	rs2614657	0.8	0.8	0.798	0.799521	0.841	0.7698	0.7233	0.7769	0.8722	0.85	0.82	0.77	0.72	0.8282	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.030489	NA	NA	0.830542	0.789545	NA	0.783	NA	1.8335914
1469	1	22313197	22313197	C	A	intronic	CELA3B	NA	NA	NA	intronic	ENSG00000219073	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs34963341	0.59	0.59	0.607	0.61222	0.7525	0.373	0.5274	0.6437	0.7321	0.75	0.35	0.57	0.64	0.6759	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.713752	NA	NA	0.739715	0.654178	NA	0.58	NA	1.831885
1469	3	10258762	10258762	G	C	intronic	IRAK2	NA	NA	NA	intronic	ENSG00000134070	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs2302860	0.55	0.55	0.549	0.519968	0.7435	0.1379	0.6744	0.6452	0.4049	0.76	0.16	0.69	0.61	0.6508	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.79126	NA	NA	0.774186	0.657739	ID=COSN166814;OCCURENCE=1(haematopoietic_and_lymphoid_tissue),1(large_intestine)	0.659	NA	1.831514
1469	9	123888242	123888242	G	T	intronic	CNTRL	NA	NA	NA	intronic	ENSG00000119397	NA	NA	NA	NA	NA	9q33.2	NA	NA	NA	NA	rs10760150	0.77	0.77	0.758	0.788738	0.7107	0.9663	0.7824	0.6135	0.9274	0.71	0.98	0.79	0.6	0.7528	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.213312	NA	NA	0.705397	0.621026	NA	0.703	NA	1.831103
1469	6	155574207	155574207	T	C	intronic	TIAM2	NA	NA	NA	intronic	ENSG00000146426	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs2274824	0.6	0.6	0.602	0.580471	0.7505	0.3462	0.4784	0.6936	0.5665	0.75	0.33	0.54	0.73	0.6743	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.546132	NA	NA	0.745814	0.682932	NA	0.717	NA	1.829386
1469	14	24718515	24718515	G	A	UTR3	TGM1	NM_000359:c.*4C>T	NA	NA	UTR3	ENSG00000092295	ENST00000206765:c.*4C>T,ENST00000544573:c.*4C>T	NA	NA	NA	NA	14q12	NA	NA	NA	NA	rs2229463	0.73	0.73	0.732	0.716254	0.8529	0.5933	0.853	0.6853	0.6472	0.84	0.54	0.84	0.69	0.7913	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.866864	NA	NA	0.859767	0.698366	NA	0.739	NA	1.8293664
1469	1	204978533	204978533	A	G	intronic	NFASC	NA	NA	NA	intronic	ENSG00000163531	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs1530745	0.62	0.62	0.6	0.647564	0.7406	0.4573	0.549	0.6694	0.7883	0.74	0.41	0.64	0.66	0.6972	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.289242	NA	NA	0.7333	0.70605	NA	0.667	NA	1.8289
1469	2	31588288	31588288	T	A	intronic	XDH	NA	NA	NA	intronic	ENSG00000158125	NA	NA	NA	NA	NA	2p23.1	NA	NA	NA	NA	rs2365842	0.69	0.69	0.686	0.662141	0.7416	0.8284	0.6859	0.4274	0.7096	0.75	0.84	0.7	0.41	0.7093	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.127945	NA	NA	0.720349	0.460508	NA	0.696	NA	1.828751
1469	5	52366138	52366138	G	A	intronic	ITGA2	NA	NA	NA	intronic	ENSG00000164171	NA	NA	NA	NA	NA	5q11.2	NA	NA	NA	NA	rs2112290	0.69	0.69	0.677	0.685304	0.7296	0.4454	0.7695	0.7821	0.6963	0.73	0.49	0.76	0.81	0.7134	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.184067	NA	NA	0.72906	0.794825	NA	0.717	NA	1.82794
1469	5	16177807	16177807	A	G	intronic	MARCH11	NA	NA	NA	intronic	ENSG00000183654	NA	NA	NA	NA	NA	5p15.1	NA	NA	NA	NA	rs2582666	0.72	0.72	0.692	0.644768	0.7326	0.9117	0.7406	0.3933	0.5511	0.75	0.93	0.73	0.42	0.7063	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.921168	NA	NA	0.733988	0.447107	NA	0.63	NA	1.827112
1469	10	129183015	129183015	T	G	intronic	DOCK1	NA	NA	NA	intronic	ENSG00000150760	NA	NA	NA	NA	NA	10q26.2	NA	NA	NA	NA	rs878562	0.77	0.77	0.789	0.769169	0.7227	0.7669	0.7536	0.8487	0.7229	0.73	0.77	0.78	0.84	0.7377	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.510639	NA	NA	0.712603	0.82953	NA	0.833	NA	1.826997
1469	2	233350000	233350000	C	G	intronic	ECEL1	NA	NA	NA	intronic	ENSG00000171551	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs2573246	0.68	0.68	0.66	0.673922	0.7276	0.7609	0.7536	0.4508	0.774	0.75	0.77	0.73	0.44	0.7211	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.088111	NA	NA	0.724535	0.497049	NA	0.674	NA	1.826765
1469	2	189866199	189866199	T	A	intronic	COL3A1	NA	NA	NA	intronic	ENSG00000168542	NA	NA	NA	NA	NA	2q32.2	NA	NA	NA	NA	rs2271682	0.75	0.75	0.711	0.776358	0.7068	0.9315	0.7608	0.6785	0.8313	0.71	0.92	0.71	0.66	0.7587	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.102157	NA	NA	0.707907	0.688379	NA	0.725	NA	1.826593
1469	21	34799350	34799350	C	G	intronic	IFNGR2	NA	NA	NA	intronic	ENSG00000159128	NA	NA	NA	NA	NA	21q22.11	NA	NA	NA	NA	rs11910627	0.84	0.84	0.83	0.842252	0.7177	0.9861	0.8285	0.8707	0.7935	0.72	0.99	0.83	0.86	0.7642	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.14174	NA	NA	0.69186	0.86995	NA	0.768	NA	1.82624
1469	6	33641956	33641956	T	C	intronic	ITPR3	NA	NA	NA	intronic	ENSG00000096433	NA	NA	NA	NA	NA	6p21.31	NA	NA	NA	NA	rs7769838	0.8	0.8	0.797	0.830072	0.7028	0.9772	0.7853	0.7776	0.9121	0.7	0.97	0.78	0.78	0.7728	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.860855	NA	NA	0.698372	0.767136	NA	0.833	NA	1.826028
1470	15	42059521	42059521	A	T	UTR3	MGA	NM_001164273:c.*43A>T,NM_001080541:c.*43A>T	NA	NA	UTR3	ENSG00000174197	ENST00000545763:c.*43A>T,ENST00000389936:c.*43A>T,ENST00000219905:c.*43A>T,ENST00000566586:c.*43A>T,ENST00000570161:c.*43A>T	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs2605570	0.82	0.82	0.809	0.80611	0.841	0.8899	0.8473	0.6732	0.8344	0.85	0.88	0.84	0.67	0.8312	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.504567	NA	NA	0.836226	0.693382	NA	0.71	NA	1.8249074
1470	17	1679805	1679805	A	G	intronic	SERPINF1	NA	NA	NA	intronic	ENSG00000132386	NA	NA	NA	NA	NA	17p13.3	NA	NA	NA	NA	rs2071022	0.79	0.79	0.823	0.776957	0.7386	0.7768	0.7565	0.9198	0.638	0.76	0.78	0.71	0.92	0.7294	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.015305	NA	NA	0.707907	0.888788	NA	0.732	NA	1.824093
1470	13	109459020	109459020	G	A	intronic	MYO16	NA	NA	NA	intronic	ENSG00000041515	NA	NA	NA	NA	NA	13q33.3	NA	NA	NA	NA	rs9301323	0.67	0.67	0.63	0.642971	0.7455	0.7857	0.7464	0.3351	0.7331	0.75	0.81	0.76	0.32	0.7168	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.191823	NA	NA	0.714651	0.395143	NA	0.522	NA	1.823049
1470	17	1684772	1684772	T	C	intronic	SMYD4	NA	NA	NA	intronic	ENSG00000186532	NA	NA	NA	NA	NA	17p13.3	NA	NA	NA	NA	rs7224977	0.79	0.79	0.809	0.776558	0.7386	0.7758	0.755	0.9198	0.638	0.76	0.78	0.7	0.92	0.731	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.571975	NA	NA	0.707442	0.890831	NA	0.746	NA	1.822958
1470	4	2829077	2829077	T	C	intronic	SH3BP2	NA	NA	NA	intronic	ENSG00000087266	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs2269485	0.72	0.72	0.731	0.776757	0.7137	0.5526	0.8055	0.9448	0.8252	0.71	0.53	0.75	0.94	0.7481	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.075377	NA	NA	0.716512	0.908534	NA	0.739	NA	1.821688
1470	12	104124061	104124061	A	G	intronic	STAB2	NA	NA	NA	intronic	ENSG00000136011	NA	NA	NA	NA	NA	12q23.3	NA	NA	NA	NA	rs4981042	0.86	0.86	0.864	0.864018	0.7227	0.9752	0.7723	0.9796	0.8037	0.72	0.98	0.79	0.98	0.7653	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.875388	NA	NA	0.690465	0.92079	NA	0.884	NA	1.821535
1470	11	129743012	129743012	A	G	intronic	NFRKB	NA	NA	NA	intronic	ENSG00000170322	NA	NA	NA	NA	NA	11q24.3	NA	NA	NA	NA	rs1650826	0.74	0.74	0.769	0.750599	0.7097	0.6548	0.6873	0.9387	0.682	0.72	0.64	0.71	0.91	0.7542	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.798489	1.798489	NA	0.714935	0.907805	NA	0.812	NA	1.821165
1470	2	242149073	242149073	G	A	intronic	ANO7	NA	NA	NA	intronic	ENSG00000146205	NA	NA	NA	NA	NA	2q37.3	NA	NA	NA	NA	rs10192730	0.73	0.73	0.747	0.717452	0.7266	0.4692	0.8602	0.9803	0.5072	0.72	0.47	0.84	0.95	0.7236	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.535528	NA	NA	0.728711	0.94099	NA	0.717	NA	1.821089
1470	17	1687796	1687796	A	G	intronic	SMYD4	NA	NA	NA	intronic	ENSG00000186532	NA	NA	NA	NA	NA	17p13.3	NA	NA	NA	NA	rs3815612	0.8	0.8	0.81	0.778155	0.7396	0.7768	0.7565	0.9251	0.636	0.76	0.78	0.7	0.93	0.7309	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.157744	NA	NA	0.709186	0.894916	NA	0.761	NA	1.820314
1470	14	94931016	94931016	T	G	intronic	SERPINA9	NA	NA	NA	ncRNA_exonic	ENSG00000256357	NA	NA	NA	NA	NA	14q32.13	NA	NA	NA	NA	rs8020984	0.8	0.8	0.772	0.8123	0.8569	0.6468	0.7867	0.8661	0.8824	0.86	0.66	0.78	0.86	0.8177	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.284661	NA	NA	0.838765	0.84153	NA	0.862	NA	1.8199683
1470	14	22337119	22337119	G	C	intergenic	OR4E2,DAD1	dist=202881;dist=696688	NA	NA	intronic	ENSG00000211788	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs909075	0.68	0.68	0.678	0.689097	0.5994	0.7629	0.6268	0.7352	0.6871	0.61	0.76	0.63	0.75	0.6402	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.376809	NA	NA	0.607905	0.705821	NA	0.754	NA	1.8191617
1470	11	68476011	68476011	A	G	intronic	MTL5	NA	NA	NA	intronic	ENSG00000132749	NA	NA	NA	NA	NA	11q13.3	NA	NA	NA	NA	rs4930597	0.71	0.71	0.686	0.715455	0.7336	0.8611	0.7378	0.5416	0.7658	0.74	0.85	0.68	0.53	0.7439	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.004164	NA	NA	0.703656	0.568182	NA	0.681	NA	1.818844
1470	20	47852822	47852822	G	A	intronic	DDX27	NA	NA	NA	intronic	ENSG00000124228	NA	NA	NA	NA	NA	20q13.13	NA	NA	NA	NA	rs238152	0.61	0.61	0.602	0.561502	0.7515	0.4593	0.611	0.5076	0.5092	0.75	0.43	0.65	0.57	0.6756	0.75	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.853086	NA	NA	0.754419	0.541534	NA	0.609	NA	1.818481
1470	13	24869048	24869048	T	C	intronic	SPATA13	NA	NA	NA	intronic	ENSG00000182957	NA	NA	NA	NA	NA	13q12.12	NA	NA	NA	NA	rs9553233	0.75	0.75	0.753	0.753794	0.7207	0.9216	0.6585	0.7042	0.7495	0.7	0.93	0.67	0.68	0.7268	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.405259	NA	NA	0.735814	0.696096	NA	0.797	NA	1.816686
1470	6	42036395	42036395	A	C	intronic	TAF8	NA	NA	NA	intronic	ENSG00000137413	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs2492926	0.76	0.76	0.743	0.744409	0.7008	0.8185	0.7421	0.8162	0.6176	0.7	0.83	0.77	0.79	0.7394	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.111253	NA	NA	0.743182	0.801435	NA	0.652	NA	1.816618
1470	12	69980028	69980028	G	A	intronic	CCT2	NA	NA	NA	intronic	ENSG00000166226	NA	NA	NA	NA	NA	12q15	NA	NA	NA	NA	rs485288	0.78	0.78	0.787	0.775559	0.7286	0.8948	0.7882	0.6543	0.8558	0.73	0.92	0.79	0.69	0.7488	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.032206	NA	NA	0.707093	0.682478	NA	0.732	NA	1.815507
1470	19	57865082	57865082	T	C	intronic	ZNF304	NA	NA	NA	intronic	ENSG00000131845	NA	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs862703	0.75	0.75	0.737	0.755791	0.7107	0.9415	0.7464	0.5287	0.9243	0.72	0.94	0.74	0.58	0.7573	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.084244	NA	NA	0.71686	0.588289	NA	0.79	NA	1.81514
1470	15	42820451	42820451	C	T	intronic	SNAP23	NA	NA	NA	intronic	ENSG00000092531	NA	NA	NA	NA	NA	15q15.2	NA	NA	NA	NA	rs9302112	0.59	0.59	0.535	0.522165	0.7644	0.7857	0.5173	0.0575	0.6329	0.78	0.79	0.57	0.08	0.676	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.137095	NA	NA	0.744592	0.176123	NA	0.514	NA	1.815008
1471	5	52344610	52344610	A	G	intronic	ITGA2	NA	NA	NA	intronic	ENSG00000164171	NA	NA	NA	NA	NA	5q11.2	NA	NA	NA	NA	rs1421933	0.71	0.71	0.684	0.702276	0.7326	0.506	0.7709	0.7837	0.7147	0.73	0.56	0.76	0.81	0.7213	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.616646	NA	NA	0.731279	0.795733	NA	0.739	NA	1.814821
1471	17	74019572	74019572	T	C	intronic	EVPL	NA	NA	NA	intronic	ENSG00000167880	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs2257388	0.73	0.73	0.79	0.829473	0.7028	0.8413	0.7392	0.9675	0.8252	0.65	0.76	0.66	0.85	0.7636	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.042388	NA	NA	0.726141	0.931984	NA	0.819	NA	1.807459
1471	1	157802979	157802979	C	T	intronic	CD5L	NA	NA	NA	intronic	ENSG00000073754	NA	NA	NA	NA	NA	1q23.1	NA	NA	NA	NA	rs2261295	0.77	0.77	0.768	0.803914	0.7197	0.8095	0.7622	0.8427	0.862	0.72	0.81	0.72	0.85	0.7568	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.15665	NA	NA	0.716047	0.796187	NA	0.862	NA	1.807453
1471	15	49867323	49867323	G	A	intronic	FAM227B	NA	NA	NA	intronic	ENSG00000166262	NA	NA	NA	NA	NA	15q21.2	NA	NA	NA	NA	rs12902107	0.76	0.76	0.723	0.733626	0.7177	0.9375	0.8098	0.5893	0.681	0.72	0.93	0.79	0.6	0.7367	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.993365	NA	NA	0.738411	0.617031	NA	0.681	NA	1.807189
1471	6	44270768	44270768	G	T	intronic	AARS2	NA	NA	NA	intronic	ENSG00000124608,ENSG00000272442	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs325002	0.61	0.61	0.587	0.584265	0.7256	0.4266	0.7666	0.4697	0.6268	0.73	0.44	0.79	0.49	0.7033	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.276541	NA	NA	0.764419	0.521335	NA	0.667	NA	1.806681
1472	4	6377530	6377530	C	G	intronic	PPP2R2C	NA	NA	NA	intronic	ENSG00000074211	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs4688997	0.75	0.75	0.699	0.71905	0.7356	0.9881	0.7767	0.4501	0.7474	0.74	0.99	0.75	0.47	0.7448	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.425448	NA	NA	0.71686	0.496369	NA	0.739	NA	1.80274
1472	6	31097453	31097453	T	G	intronic	PSORS1C1	NA	NA	NA	intronic	ENSG00000204540	NA	NA	NA	NA	NA	6p21.33	NA	NA	NA	NA	rs3130560	0.79	0.79	0.802	0.821086	0.7227	0.8849	0.7565	0.8767	0.8272	0.72	0.87	0.72	0.87	0.7477	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.99598	NA	NA	0.727021	0.85043	NA	0.833	NA	1.802579
1472	3	46967040	46967040	G	A	intronic	CCDC12	NA	NA	NA	intronic	ENSG00000160799	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs2290545	0.71	0.71	0.716	0.701677	0.7376	0.4563	0.7233	0.8949	0.6411	0.74	0.49	0.73	0.91	0.7212	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.421196	NA	NA	0.738837	0.86246	ID=COSN166866;OCCURENCE=1(stomach),31(haematopoietic_and_lymphoid_tissue),1(urinary_tract),1(liver),13(lung)	0.804	NA	1.802363
1472	11	103013954	103013954	G	T	intronic	DYNC2H1	NA	NA	NA	intronic	ENSG00000187240	NA	NA	NA	NA	NA	11q22.3	NA	NA	NA	NA	rs2514006	0.69	0.69	0.641	0.68131	0.7386	0.7827	0.7565	0.4682	0.7526	0.73	0.78	0.75	0.49	0.7317	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.505177	NA	NA	0.72966	0.515686	ID=COSN164036;OCCURENCE=1(breast)	0.739	NA	1.80004
1472	6	89814830	89814830	A	G	intronic	SRSF12	NA	NA	NA	intronic	ENSG00000154548	NA	NA	NA	NA	NA	6q15	NA	NA	NA	NA	rs7753709	0.76	0.76	0.759	0.76877	0.7247	0.8304	0.7248	0.77	0.7802	0.73	0.81	0.71	0.76	0.7497	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.012447	NA	NA	0.727306	0.725673	NA	0.761	NA	1.798294
1472	9	131600111	131600111	T	C	intronic	CCBL1	NA	NA	NA	intronic	ENSG00000171097	NA	NA	NA	NA	NA	9q34.11	NA	NA	NA	NA	rs2280841	0.67	0.67	0.619	0.599441	0.7445	0.7331	0.7853	0.2935	0.5941	0.79	0.75	0.77	0.33	0.708	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.759657	NA	NA	0.74928	0.380413	NA	0.652	NA	1.79822
1472	14	20767618	20767618	G	A	intronic	TTC5	NA	NA	NA	intronic	ENSG00000136319	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs2318864	0.77	0.77	0.768	0.729433	0.7406	0.7907	0.8559	0.7874	0.4867	0.75	0.8	0.83	0.75	0.7278	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.959037	1.959037	NA	0.733953	0.785747	NA	0.732	NA	1.797647
1472	12	7638020	7638020	G	A	intronic	CD163	NA	NA	NA	intronic	ENSG00000177575	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs10743939	0.51	0.51	0.461	0.478235	0.7704	0.38	0.7075	0.1241	0.5951	0.76	0.38	0.7	0.13	0.6714	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.391876	NA	NA	0.760814	0.222424	NA	0.5	NA	1.797386
1472	8	39525750	39525750	C	A	intronic	ADAM18	NA	NA	NA	intronic	ENSG00000168619	NA	NA	NA	NA	NA	8p11.22	NA	NA	NA	NA	rs2305392	0.6	0.6	0.585	0.624601	0.7475	0.245	0.6686	0.7466	0.6933	0.75	0.26	0.69	0.72	0.6938	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.451896	NA	NA	0.761395	0.766682	NA	0.645	NA	1.797305
1472	3	88188420	88188420	G	A	UTR5	ZNF654	NM_018293:c.-41G>A	NA	NA	UTR5	ENSG00000175105	ENST00000309495:c.-41G>A	NA	NA	NA	NA	3p11.1	NA	NA	NA	NA	rs9813894	0.79	0.79	0.778	0.783347	0.8429	0.8363	0.8516	0.5703	0.907	0.83	0.86	0.87	0.59	0.8381	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.377526	NA	NA	0.855058	0.634737	NA	0.674	NA	1.7972754
1472	7	16650427	16650427	C	G	intronic	ANKMY2	NA	NA	NA	intronic	ENSG00000106524	NA	NA	NA	NA	NA	7p21.1	NA	NA	NA	NA	rs572570	0.8	0.8	0.782	0.770168	0.7555	0.8264	0.8084	0.8245	0.6268	0.75	0.84	0.82	0.79	0.7322	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.065982	NA	NA	0.715565	0.820926	NA	0.652	NA	1.796735
1472	17	10553046	10553046	A	G	intronic	MYH3	NA	NA	NA	intronic	ENSG00000109063	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs1989810	0.54	0.54	0.535	0.525759	0.7893	0.3849	0.549	0.379	0.5818	0.78	0.37	0.54	0.37	0.6505	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.109184	NA	NA	0.763488	0.43123	NA	0.659	NA	1.796712
1472	13	113889474	113889474	C	T	intronic	CUL4A	NA	NA	NA	intronic	ENSG00000139842	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs2287250	0.61	0.61	0.623	0.573283	0.7634	0.4514	0.5663	0.5514	0.5378	0.75	0.46	0.59	0.58	0.6738	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.551846	NA	NA	0.766512	0.581934	NA	0.616	NA	1.796288
1473	12	69980141	69980141	G	C	intronic	CCT2	NA	NA	NA	intronic	ENSG00000166226	NA	NA	NA	NA	NA	12q15	NA	NA	NA	NA	rs484319	0.84	0.84	0.864	0.853435	0.7306	0.8958	0.8199	0.9297	0.8569	0.73	0.92	0.83	0.93	0.7685	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.854558	NA	NA	0.708023	0.88266	NA	0.826	NA	1.792877
1473	8	95677132	95677132	T	C	intronic	ESRP1	NA	NA	NA	intronic	ENSG00000104413	NA	NA	NA	NA	NA	8q22.1	NA	NA	NA	NA	rs1426171	0.73	0.73	0.726	0.718051	0.7366	0.7619	0.7406	0.5968	0.8016	0.75	0.79	0.75	0.61	0.7361	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.388873	NA	NA	0.734644	0.612948	NA	0.761	NA	1.792656
1473	15	27890491	27890491	G	T	intergenic	GABRG3,OCA2	dist=112118;dist=109532	NA	NA	intergenic	ENSG00000258594,ENSG00000258853	dist=16056;dist=39153	NA	NA	NA	NA	15q12	NA	NA	NA	NA	rs1871017	0.55	0.55	0.557	0.576677	0.5179	0.7768	0.5216	0.444	0.6493	0.52	0.76	0.46	0.43	0.5316	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.140118	NA	NA	0.491462	0.430365	NA	0.565	NA	1.7923714
1473	3	9841989	9841989	A	G	intronic	ARPC4,ARPC4-TTLL3	NA	NA	NA	intronic	ENSG00000241553,ENSG00000250151	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs6443266	0.67	0.67	0.679	0.655351	0.7734	0.6964	0.621	0.5121	0.7096	0.78	0.69	0.67	0.49	0.7043	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.69274	NA	NA	0.732359	0.575412	NA	0.696	NA	1.789941
1473	11	103033914	103033914	A	T	intronic	DYNC2H1	NA	NA	NA	intronic	ENSG00000187240	NA	NA	NA	NA	NA	11q22.3	NA	NA	NA	NA	rs657936	0.71	0.71	0.681	0.697284	0.7366	0.7857	0.755	0.5393	0.7382	0.74	0.78	0.74	0.57	0.7368	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.416408	NA	NA	0.736703	0.592372	NA	0.725	NA	1.789897
1473	19	19758190	19758190	T	C	intronic	ATP13A1	NA	NA	NA	intronic	ENSG00000105726	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs892035	0.76	0.76	0.747	0.792332	0.7266	0.622	0.8156	0.9175	0.8497	0.73	0.63	0.8	0.92	0.7613	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.774771	NA	NA	0.724419	0.877894	NA	0.732	NA	1.787681
1473	2	160663678	160663678	T	C	intronic	LY75,LY75-CD302	NA	NA	NA	intronic	ENSG00000054219,ENSG00000248672	NA	NA	NA	NA	NA	2q24.2	NA	NA	NA	NA	rs7566887	0.64	0.64	0.65	0.605631	0.7664	0.3948	0.755	0.59	0.5726	0.78	0.42	0.75	0.61	0.6949	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.107474	NA	NA	0.751047	0.579437	NA	0.623	NA	1.787653
1473	15	28116275	28116275	G	C	intronic	OCA2	NA	NA	NA	intronic	ENSG00000104044	NA	NA	NA	NA	NA	15q13.1	NA	NA	NA	NA	rs7175046	0.86	0.86	0.861	0.88778	0.7296	1	0.7824	0.9607	0.911	0.71	1	0.81	0.96	0.7778	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.04755	NA	NA	0.705349	0.920563	NA	0.884	NA	1.787251
1473	11	397706	397706	T	C	intronic	PKP3	NA	NA	NA	intronic	ENSG00000184363	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs9795298	0.85	0.85	0.851	0.896765	0.7177	0.998	0.7565	0.9803	0.9632	0.71	1	0.74	0.97	0.7825	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.050923	NA	NA	0.713319	0.940009	NA	0.754	NA	1.786481
1473	17	2196150	2196150	C	T	intronic	SMG6	NA	NA	NA	intronic	ENSG00000070366	NA	NA	NA	NA	NA	17p13.3	NA	NA	NA	NA	rs216205	0.74	0.74	0.726	0.757788	0.7127	0.7768	0.7709	0.7678	0.7618	0.7	0.79	0.77	0.72	0.7541	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.014732	NA	NA	0.747326	0.761008	NA	0.725	NA	1.785874
1473	5	61826663	61826663	G	T	intronic	IPO11	NA	NA	NA	intronic	ENSG00000086200	NA	NA	NA	NA	NA	5q12.1	NA	NA	NA	NA	rs32179	0.8	0.8	0.802	0.845847	0.7068	0.8105	0.8602	0.9818	0.8313	0.69	0.79	0.81	0.98	0.7756	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.06067	NA	NA	0.73213	0.948636	NA	0.848	NA	1.78547
1474	1	175116252	175116252	C	G	UTR3	TNN	NM_022093:c.*45C>G	NA	NA	UTR3	ENSG00000120332	ENST00000239462:c.*45C>G	NA	NA	NA	NA	1q25.1	NA	NA	NA	NA	rs4651335	0.87	0.87	0.87	0.851038	0.8459	0.7331	0.9049	0.9947	0.7454	0.86	0.74	0.89	0.99	0.8533	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.195963	NA	NA	0.849302	0.963232	NA	0.92	NA	1.7848314
1474	1	1021415	1021415	A	G	intronic	C1orf159	NA	NA	NA	intronic	ENSG00000131591	NA	NA	NA	NA	NA	1p36.33	NA	NA	NA	NA	rs3737728	0.8	0.8	0.778	0.8127	0.7386	0.9177	0.8055	0.8109	0.7883	0.72	0.91	0.78	0.79	0.7559	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.958726	NA	NA	0.721731	0.775682	NA	0.746	NA	1.783769
1474	22	31600460	31600460	T	C	intronic	RNF185	NA	NA	NA	intronic	ENSG00000138942	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs2413035	0.83	0.83	0.856	0.846246	0.7276	0.8819	0.7478	0.9849	0.8139	0.72	0.88	0.76	0.98	0.7642	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.601563	NA	NA	0.724767	0.945075	NA	0.833	NA	1.783433
1474	17	79077957	79077957	T	C	intronic	BAIAP2	NA	NA	NA	intronic	ENSG00000175866	NA	NA	NA	NA	NA	17q25.3	NA	NA	NA	NA	rs34057293	0.78	0.78	0.769	0.800319	0.7147	0.8641	0.8415	0.7678	0.8374	0.71	0.85	0.83	0.78	0.7664	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.388445	NA	NA	0.736854	0.752615	NA	0.775	NA	1.782046
1474	9	117836188	117836188	A	G	intronic	TNC	NA	NA	NA	intronic	ENSG00000041982	NA	NA	NA	NA	NA	9q33.1	NA	NA	NA	NA	rs2210108	0.73	0.73	0.726	0.744409	0.7575	0.5635	0.7334	0.9425	0.6575	0.76	0.55	0.71	0.93	0.7255	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.596987	NA	NA	0.735233	0.909669	NA	0.717	NA	1.781767
1474	3	14939198	14939198	G	A	intronic	FGD5	NA	NA	NA	intronic	ENSG00000154783	NA	NA	NA	NA	NA	3p25.1	NA	NA	NA	NA	rs2117775	0.71	0.71	0.702	0.714856	0.7376	0.5952	0.7017	0.8548	0.635	0.74	0.56	0.71	0.83	0.7263	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.88974	NA	NA	0.754492	0.835257	NA	0.775	NA	1.781608
1474	1	207014472	207014472	A	C	intronic	IL19	NA	NA	NA	intronic	ENSG00000142224	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs2243188	0.62	0.62	0.599	0.613818	0.7594	0.4058	0.6455	0.5582	0.7311	0.77	0.37	0.69	0.62	0.692	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.325591	NA	NA	0.767442	0.608261	NA	0.601	NA	1.781158
1474	8	95186295	95186295	T	C	intronic	CDH17	NA	NA	NA	intronic	ENSG00000079112	NA	NA	NA	NA	NA	8q22.1	NA	NA	NA	NA	rs2514813	0.67	0.67	0.689	0.679912	0.7555	0.369	0.6081	0.9433	0.6176	0.75	0.37	0.62	0.93	0.6959	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.546845	NA	NA	0.768372	0.908988	ID=COSN168373;OCCURENCE=1(large_intestine)	0.819	NA	1.780228
1474	16	74504005	74504005	T	C	intronic	GLG1	NA	NA	NA	intronic	ENSG00000090863	NA	NA	NA	NA	NA	16q23.1	NA	NA	NA	NA	rs2303279	0.73	0.73	0.73	0.673522	0.7614	0.6776	0.5764	0.8109	0.4622	0.76	0.66	0.62	0.83	0.6928	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.924452	NA	NA	0.76593	0.816879	NA	0.739	NA	1.77987
1474	1	89478854	89478854	C	G	intronic	GBP3	NA	NA	NA	intronic	ENSG00000117226	NA	NA	NA	NA	NA	1p22.2	NA	NA	NA	NA	rs4656076	0.56	0.56	0.525	0.547324	0.7604	0.5268	0.5576	0.2534	0.7393	0.76	0.51	0.64	0.25	0.6895	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.192952	NA	NA	0.770814	0.371085	NA	0.529	NA	1.779286
1474	6	152793412	152793412	C	A	intronic	SYNE1	NA	NA	NA	intronic	ENSG00000131018	NA	NA	NA	NA	NA	6q25.2	NA	NA	NA	NA	rs4523096	0.85	0.85	0.863	0.855232	0.7525	0.9494	0.7104	0.9871	0.7883	0.76	0.95	0.72	0.98	0.7657	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.241386	NA	NA	0.704419	0.93645	NA	0.797	NA	1.777381
1474	9	139804346	139804346	C	T	intronic	TRAF2	NA	NA	NA	intronic	ENSG00000127191	NA	NA	NA	NA	NA	9q34.3	NA	NA	NA	NA	rs4448378	0.77	0.77	0.806	0.780152	0.7416	0.88	0.5548	0.829	0.8108	0.74	0.89	0.59	0.81	0.7444	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.735493	NA	NA	0.736628	0.812074	NA	0.79	NA	1.777372
1474	6	32184705	32184705	G	A	intronic	NOTCH4	NA	NA	NA	intronic	ENSG00000204301	NA	NA	NA	NA	NA	6p21.32	NA	NA	NA	NA	rs3134798	0.78	0.78	0.809	0.824481	0.7256	0.9137	0.6902	0.8669	0.8722	0.71	0.9	0.69	0.84	0.7723	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.12801	NA	NA	0.72536	0.849107	NA	0.884	NA	1.77674
1474	2	223806194	223806194	C	T	intronic	ACSL3	NA	NA	NA	intronic	ENSG00000123983	NA	NA	NA	NA	NA	2q36.1	NA	NA	NA	NA	rs1550426	0.87	0.87	0.747	0.898762	0.7893	0.9673	0.8847	0.9191	0.9233	0.77	0.97	0.86	0.91	0.7259	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.624724	NA	NA	0.70876	0.873742	NA	0.326	NA	1.77604
1474	8	139617046	139617046	A	C	intronic	COL22A1	NA	NA	NA	intronic	ENSG00000169436	NA	NA	NA	NA	NA	8q24.23	NA	NA	NA	NA	rs12546923	0.62	0.62	0.584	0.559904	0.7644	0.6984	0.5605	0.2466	0.6299	0.77	0.68	0.6	0.31	0.684	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.604222	NA	NA	0.775581	0.347935	NA	0.514	NA	1.776019
1474	8	39505826	39505826	C	A	intronic	ADAM18	NA	NA	NA	intronic	ENSG00000168619	NA	NA	NA	NA	NA	8p11.22	NA	NA	NA	NA	rs3735880	0.55	0.55	0.528	0.552915	0.7614	0.248	0.6499	0.4735	0.6912	0.76	0.26	0.67	0.46	0.6868	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.146097	NA	NA	0.776227	0.548138	NA	0.551	NA	1.775573
1475	7	31876766	31876766	T	C	intronic	PDE1C	NA	NA	NA	intronic	ENSG00000154678	NA	NA	NA	NA	NA	7p14.3	NA	NA	NA	NA	rs2270218	0.75	0.75	0.737	0.742812	0.7376	0.7669	0.719	0.7784	0.6922	0.75	0.73	0.69	0.82	0.7409	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.54789	NA	NA	0.746744	0.761916	NA	0.812	NA	1.774756
1475	7	7398457	7398457	T	G	intronic	COL28A1	NA	NA	NA	intronic	ENSG00000215018	NA	NA	NA	NA	NA	7p21.3	NA	NA	NA	NA	rs2348042	0.66	0.66	0.634	0.639377	0.7604	0.873	0.7565	0.1762	0.817	0.77	0.87	0.75	0.2	0.7276	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.669381	NA	NA	0.737616	0.279146	NA	0.674	NA	1.774384
1475	7	2962753	2962753	G	A	intronic	CARD11	NA	NA	NA	intronic	ENSG00000198286	NA	NA	NA	NA	NA	7p22.2	NA	NA	NA	NA	rs2527509	0.56	0.56	0.538	0.505391	0.7734	0.3849	0.5994	0.3048	0.5583	0.78	0.42	0.64	0.32	0.6795	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.149185	NA	NA	0.773701	0.363533	NA	0.609	NA	1.773399
1475	8	139620267	139620267	G	A	intronic	COL22A1	NA	NA	NA	intronic	ENSG00000169436	NA	NA	NA	NA	NA	8q24.23	NA	NA	NA	NA	rs11166829	0.63	0.63	0.595	0.559704	0.7644	0.6984	0.5605	0.2466	0.6288	0.78	0.7	0.62	0.33	0.6857	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.576091	NA	NA	0.776512	0.3468	NA	0.514	NA	1.773388
1475	22	31685458	31685458	G	A	intronic	PIK3IP1	NA	NA	NA	intronic	ENSG00000100100	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs5753543	0.82	0.82	0.853	0.845048	0.7266	0.876	0.7478	0.9856	0.8139	0.71	0.87	0.76	0.98	0.7775	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.704033	NA	NA	0.724651	0.945075	NA	0.833	NA	1.771249
1475	14	104561998	104561998	T	C	intronic	ASPG	NA	NA	NA	intronic	ENSG00000166183	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs1770983	0.8	0.8	0.775	0.814097	0.7266	0.8938	0.8429	0.7753	0.8538	0.74	0.89	0.82	0.77	0.7775	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.459062	NA	NA	0.725448	0.76155	NA	0.841	NA	1.770452
1475	13	113854715	113854715	C	T	intronic	PCID2	NA	NA	NA	intronic	ENSG00000126226	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs3751413	0.59	0.59	0.635	0.582268	0.7744	0.4544	0.6239	0.559	0.5184	0.72	0.44	0.6	0.53	0.6817	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.596792	NA	NA	0.77407	0.593282	NA	0.638	NA	1.76983
1475	17	37790371	37790371	G	A	intronic	PPP1R1B	NA	NA	NA	intronic	ENSG00000131771	NA	NA	NA	NA	NA	17q12	NA	NA	NA	NA	rs907094	0.55	0.55	0.557	0.515575	0.7753	0.4365	0.585	0.2156	0.6861	0.78	0.51	0.62	0.22	0.6924	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.416887	NA	NA	0.764651	0.2803	NA	0.594	NA	1.767649
1475	10	72181460	72181460	G	T	intronic	EIF4EBP2	NA	NA	NA	intronic	ENSG00000148730	NA	NA	NA	NA	NA	10q22.1	NA	NA	NA	NA	rs3793809	0.8	0.8	0.803	0.806709	0.7336	0.9683	0.7925	0.6982	0.8722	0.74	0.96	0.78	0.71	0.7689	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.071713	NA	NA	0.730581	0.701089	NA	0.739	NA	1.766919
1475	10	91483908	91483908	G	C	intronic	KIF20B	NA	NA	NA	intronic	ENSG00000138182	NA	NA	NA	NA	NA	10q23.31	NA	NA	NA	NA	rs7079174	0.8	0.8	0.798	0.84984	0.7346	0.9355	0.804	0.8185	0.955	0.74	0.94	0.78	0.76	0.7858	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.480465	NA	NA	0.713216	0.818958	NA	0.732	NA	1.766384
1475	19	49300605	49300605	T	C	intronic	BCAT2	NA	NA	NA	intronic	ENSG00000105552	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs526744	0.73	0.73	0.709	0.729433	0.7425	0.5248	0.7997	0.8646	0.6943	0.75	0.57	0.79	0.85	0.7404	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.633972	NA	NA	0.751163	0.848162	NA	0.746	NA	1.765937
1475	20	47872327	47872327	A	G	intronic	ZNFX1	NA	NA	NA	intronic	ENSG00000124201	NA	NA	NA	NA	NA	20q13.13	NA	NA	NA	NA	rs238220	0.65	0.65	0.643	0.607827	0.7634	0.5278	0.6427	0.5348	0.6043	0.75	0.52	0.67	0.61	0.7014	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.660044	NA	NA	0.769767	0.563777	NA	0.616	NA	1.765433
1476	9	123550027	123550027	G	A	intronic	FBXW2	NA	NA	NA	intronic	ENSG00000119402	NA	NA	NA	NA	NA	9q33.2	NA	NA	NA	NA	rs7026635	0.73	0.73	0.719	0.755591	0.7425	0.5397	0.8487	0.8457	0.8037	0.75	0.55	0.83	0.82	0.7535	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.614331	NA	NA	0.740462	0.837911	NA	0.804	NA	1.763538
1476	11	48184983	48184983	G	T	intronic	PTPRJ	NA	NA	NA	intronic	ENSG00000149177	NA	NA	NA	NA	NA	11p11.2	NA	NA	NA	NA	rs2270990	0.72	0.72	0.593	0.719649	0.7485	0.7738	0.7997	0.5446	0.8139	0.77	0.78	0.8	0.54	0.7494	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.139419	NA	NA	0.742611	0.553612	NA	0.594	NA	1.759489
1476	12	47178307	47178307	A	G	intronic	SLC38A4	NA	NA	NA	intronic	ENSG00000139209	NA	NA	NA	NA	NA	12q13.11	NA	NA	NA	NA	rs180430	0.58	0.58	0.561	0.576478	0.7843	0.499	0.634	0.3517	0.7055	0.77	0.5	0.63	0.36	0.6923	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.175066	NA	NA	0.76407	0.420336	NA	0.587	NA	1.75933
1476	12	47173662	47173662	A	G	intronic	SLC38A4	NA	NA	NA	intronic	ENSG00000139209	NA	NA	NA	NA	NA	12q13.11	NA	NA	NA	NA	rs180426	0.6	0.6	0.593	0.583866	0.7893	0.5575	0.6326	0.3381	0.6973	0.78	0.57	0.63	0.35	0.6915	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.724787	NA	NA	0.760698	0.409669	NA	0.58	NA	1.758502
1476	10	91522605	91522605	G	C	intronic	KIF20B	NA	NA	NA	intronic	ENSG00000138182	NA	NA	NA	NA	NA	10q23.31	NA	NA	NA	NA	rs3740038	0.8	0.8	0.816	0.849042	0.7346	0.9355	0.8055	0.8147	0.955	0.74	0.94	0.78	0.76	0.7949	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.536658	NA	NA	0.712209	0.815252	NA	0.797	NA	1.758291
1476	17	19213335	19213335	C	G	intronic	EPN2	NA	NA	NA	intronic	ENSG00000072134	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs2296981	0.44	0.44	0.42	0.364018	0.8121	0.0119	0.5231	0.2103	0.3609	0.81	0.01	0.6	0.24	0.6224	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.112378	NA	NA	0.807352	0.315479	NA	0.464	NA	1.758148
1476	19	19168183	19168183	C	T	intronic	ARMC6	NA	NA	NA	intronic	ENSG00000105676	NA	NA	NA	NA	NA	19p13.11	NA	NA	NA	NA	rs7258637	0.74	0.74	0.738	0.73722	0.7624	0.881	0.7824	0.5658	0.7628	0.75	0.87	0.75	0.56	0.7418	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.246716	NA	NA	0.738023	0.585565	NA	0.572	NA	1.757777
1476	1	45486272	45486272	T	C	intronic	ZSWIM5	NA	NA	NA	intronic	ENSG00000162415	NA	NA	NA	NA	NA	1p34.1	NA	NA	NA	NA	rs998418	0.67	0.67	0.663	0.648363	0.7813	0.7024	0.562	0.4766	0.7495	0.78	0.72	0.63	0.5	0.7093	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.500885	NA	NA	0.751668	0.532767	NA	0.551	NA	1.757732
1476	4	47898491	47898491	C	T	intronic	NFXL1	NA	NA	NA	intronic	ENSG00000170448	NA	NA	NA	NA	NA	4p12	NA	NA	NA	NA	rs6447592	0.73	0.73	0.709	0.716653	0.7505	0.6875	0.7478	0.6551	0.773	0.77	0.72	0.75	0.65	0.7435	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.024884	NA	NA	0.748488	0.682025	NA	0.775	NA	1.757512
1476	20	3564772	3564772	T	A	intronic	ATRN	NA	NA	NA	intronic	ENSG00000088812	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs170976	0.82	0.82	0.808	0.824481	0.7187	0.999	0.8141	0.7088	0.9172	0.74	1	0.81	0.75	0.7867	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.472044	NA	NA	0.737209	0.719246	NA	0.71	NA	1.757391
1476	10	127426588	127426588	C	A	intronic	C10orf137	NA	NA	NA	intronic	ENSG00000107938	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs3740180	0.74	0.74	0.736	0.73722	0.7505	0.8948	0.5331	0.674	0.7914	0.76	0.89	0.57	0.67	0.736	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.035976	NA	NA	0.757791	0.686564	NA	0.696	NA	1.755709
1476	4	47853843	47853843	T	C	intronic	NFXL1	NA	NA	NA	intronic	ENSG00000170448	NA	NA	NA	NA	NA	4p12	NA	NA	NA	NA	rs6822668	0.73	0.73	0.704	0.716853	0.7505	0.6875	0.7478	0.6558	0.773	0.77	0.72	0.75	0.65	0.7448	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.418081	NA	NA	0.749302	0.683015	NA	0.775	NA	1.755398
1476	3	10219729	10219729	A	G	intronic	IRAK2	NA	NA	NA	intronic	ENSG00000134070	NA	NA	NA	NA	NA	3p25.3	NA	NA	NA	NA	rs1681663	0.6	0.6	0.563	0.582668	0.7694	0.2192	0.6916	0.6286	0.6258	0.77	0.29	0.68	0.63	0.7007	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.655429	NA	NA	0.774651	0.654789	NA	0.572	NA	1.755249
1476	20	3565546	3565546	C	G	intronic	ATRN	NA	NA	NA	intronic	ENSG00000088812	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs235538	0.82	0.82	0.808	0.824481	0.7187	0.999	0.8141	0.7088	0.9172	0.74	1	0.81	0.75	0.7878	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.220978	NA	NA	0.738488	0.719473	NA	0.71	NA	1.755012
1477	19	50796960	50796960	C	T	intronic	MYH14	NA	NA	NA	intronic	ENSG00000105357	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs3745510	0.72	0.72	0.693	0.694489	0.7545	0.9246	0.7752	0.3752	0.7699	0.76	0.92	0.75	0.41	0.7496	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.44476	NA	NA	0.741785	0.397805	NA	0.594	NA	1.754115
1477	5	5235096	5235096	A	G	intronic	ADAMTS16	NA	NA	NA	intronic	ENSG00000145536	NA	NA	NA	NA	NA	5p15.32	NA	NA	NA	NA	rs2913631	0.74	0.74	0.699	0.714257	0.7396	0.8115	0.8271	0.5446	0.7372	0.74	0.82	0.83	0.57	0.7563	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.714669	NA	NA	0.752026	0.582237	NA	0.587	NA	1.752074
1477	1	33134774	33134774	A	C	intronic	RBBP4	NA	NA	NA	intronic	ENSG00000162521	NA	NA	NA	NA	NA	1p35.1	NA	NA	NA	NA	rs359955	0.63	0.63	0.604	0.594249	0.7515	0.7679	0.6383	0.1914	0.7669	0.76	0.77	0.66	0.25	0.7301	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.028662	NA	NA	0.76686	0.292329	NA	0.536	NA	1.75154
1477	7	55228053	55228053	A	T	intronic	EGFR	NA	NA	NA	intronic	ENSG00000146648	NA	NA	NA	NA	NA	7p11.2	NA	NA	NA	NA	rs1558544	0.76	0.76	0.735	0.773363	0.7445	0.997	0.8343	0.5129	0.8814	0.74	1	0.81	0.47	0.7697	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.498247	NA	NA	0.735102	0.52342	NA	0.783	NA	1.750698
1477	1	5939544	5939544	T	G	intronic	NPHP4	NA	NA	NA	UTR3	ENSG00000131697	ENST00000489180:c.*21A>C	NA	NA	NA	NA	1p36.31	NA	NA	NA	NA	rs11121915	0.83	0.83	0.868	0.834265	0.8151	0.8423	0.7522	0.969	0.7219	0.81	0.83	0.72	0.95	0.7983	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.197696	NA	NA	0.804119	0.930365	NA	0.848	NA	1.7491477
1477	22	50876077	50876077	T	C	intronic	PPP6R2	NA	NA	NA	intronic	ENSG00000100239	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs9306550	0.85	0.85	0.866	0.831669	0.7545	0.9593	0.8084	0.9289	0.6646	0.76	0.96	0.79	0.92	0.7698	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.468829	NA	NA	0.727093	0.897413	NA	0.739	NA	1.748607
1477	5	52235802	52235802	T	G	intronic	ITGA1	NA	NA	NA	ncRNA_intronic	ENSG00000249899	NA	NA	NA	NA	NA	5q11.2	NA	NA	NA	NA	rs1904165	0.87	0.87	0.873	0.848842	0.8429	0.8899	0.9179	0.8434	0.771	0.85	0.88	0.9	0.87	0.8712	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.035241	NA	NA	0.871133	0.860354	NA	0.826	NA	1.7481003
1477	10	43659536	43659536	C	T	intronic	CSGALNACT2	NA	NA	NA	intronic	ENSG00000169826	NA	NA	NA	NA	NA	10q11.21	NA	NA	NA	NA	rs2503865	0.67	0.67	0.657	0.668131	0.7634	0.3819	0.7522	0.8752	0.5256	0.76	0.37	0.78	0.81	0.7242	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.141891	NA	NA	0.764302	0.836813	NA	0.812	NA	1.748098
1477	2	160873270	160873270	A	G	intronic	PLA2R1	NA	NA	NA	intronic	ENSG00000153246	NA	NA	NA	NA	NA	2q24.2	NA	NA	NA	NA	rs2667040	0.75	0.75	0.719	0.702676	0.7465	0.8552	0.7594	0.5983	0.6012	0.74	0.86	0.73	0.63	0.7466	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.582768	NA	NA	0.758897	0.629369	NA	0.717	NA	1.748003
1477	14	106452628	106452628	T	G	intergenic	ADAM6,LINC00226	dist=14270;dist=291641	NA	NA	downstream	ENSG00000211934	NA	NA	NA	NA	NA	14q32.33	NA	NA	NA	NA	rs7144717	0.57	0.57	0.542	0.619409	0.6083	0.745	0.5922	0.4539	0.7444	0.57	0.74	0.56	0.38	0.6302	0.74	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.008522	NA	NA	0.515306	0.362194	NA	0.333	NA	1.746194
1477	13	28609825	28609825	A	G	intronic	FLT3	NA	NA	NA	intronic	ENSG00000122025	NA	NA	NA	NA	NA	13q12.2	NA	NA	NA	NA	rs2491227	0.62	0.62	0.575	0.563099	0.7714	0.7351	0.7161	0.1944	0.5613	0.78	0.7	0.7	0.21	0.7014	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.128656	NA	NA	0.782093	0.29301	NA	0.428	NA	1.745107
1478	13	28609846	28609846	A	T	intronic	FLT3	NA	NA	NA	intronic	ENSG00000122025	NA	NA	NA	NA	NA	13q12.2	NA	NA	NA	NA	rs2491228	0.62	0.62	0.583	0.563099	0.7714	0.7351	0.7161	0.1944	0.5613	0.78	0.7	0.7	0.21	0.7029	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.236153	NA	NA	0.782093	0.293463	NA	0.507	NA	1.743607
1478	21	45821794	45821794	C	T	intronic	TRPM2	NA	NA	NA	intronic	ENSG00000142185	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs1785437	0.74	0.74	0.703	0.707867	0.7654	0.7639	0.7435	0.6543	0.638	0.76	0.77	0.76	0.66	0.7351	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.551148	NA	NA	0.756047	0.694281	NA	0.587	NA	1.743453
1478	12	105582245	105582245	A	G	intronic	APPL2	NA	NA	NA	intronic	ENSG00000136044	NA	NA	NA	NA	NA	12q23.3	NA	NA	NA	NA	rs1196852	0.81	0.81	0.803	0.809704	0.7455	0.999	0.8069	0.6914	0.8425	0.74	1	0.82	0.68	0.7757	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.778841	NA	NA	0.735349	0.714934	NA	0.877	NA	1.743451
1478	4	74447510	74447510	A	C	intronic	RASSF6	NA	NA	NA	intronic	ENSG00000169435	NA	NA	NA	NA	NA	4q13.3	NA	NA	NA	NA	rs1247671	0.78	0.78	0.767	0.767971	0.7416	0.8968	0.5591	0.7519	0.8323	0.75	0.91	0.64	0.77	0.7661	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.923331	NA	NA	0.74907	0.738311	NA	0.71	NA	1.74323
1478	21	45826462	45826462	C	A	intronic	TRPM2	NA	NA	NA	intronic	ENSG00000142185	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs1618355	0.71	0.71	0.696	0.676518	0.7674	0.7629	0.7392	0.5363	0.6391	0.76	0.76	0.75	0.54	0.734	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.116805	NA	NA	0.755605	0.583943	NA	0.551	NA	1.742995
1478	21	34726127	34726127	T	A	intronic	IFNAR1	NA	NA	NA	intronic	ENSG00000142166	NA	NA	NA	NA	NA	21q22.11	NA	NA	NA	NA	rs2856973	0.85	0.85	0.84	0.871206	0.7207	0.9911	0.866	0.888	0.8834	0.73	0.99	0.87	0.86	0.7978	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.899638	NA	NA	0.738948	0.863017	NA	0.746	NA	1.742552
1478	7	103175965	103175965	C	T	intronic	RELN	NA	NA	NA	intronic	ENSG00000189056	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs362706	0.72	0.72	0.695	0.710264	0.7614	0.623	0.7478	0.7398	0.681	0.75	0.61	0.76	0.75	0.7396	0.76	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.606827	NA	NA	0.758721	0.753291	NA	0.797	NA	1.740279
1478	13	28607989	28607989	T	G	intronic	FLT3	NA	NA	NA	intronic	ENSG00000122025	NA	NA	NA	NA	NA	13q12.2	NA	NA	NA	NA	rs2491223	0.63	0.63	0.583	0.578674	0.7734	0.7302	0.7248	0.2534	0.5583	0.78	0.7	0.71	0.26	0.7036	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.274364	NA	NA	0.783256	0.347935	NA	0.536	NA	1.739744
1478	4	5018702	5018702	G	A	intronic	CYTL1	NA	NA	NA	intronic	ENSG00000170891	NA	NA	NA	NA	NA	4p16.2	NA	NA	NA	NA	rs11724788	0.71	0.71	0.677	0.673722	0.7793	0.9643	0.781	0.2602	0.7485	0.8	0.97	0.75	0.26	0.7372	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.352519	2.352519	NA	0.74593	0.340218	NA	0.688	NA	1.73757
1478	20	23807028	23807028	A	C	intronic	CST2	NA	NA	NA	intronic	ENSG00000170369	NA	NA	NA	NA	NA	20p11.21	NA	NA	NA	NA	rs4407312	0.82	0.82	0.837	0.81849	0.7495	0.9375	0.719	0.8593	0.7822	0.75	0.93	0.73	0.85	0.7643	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.494322	NA	NA	0.748953	0.842488	NA	0.862	NA	1.737247
1478	10	64005711	64005711	C	T	intronic	RTKN2	NA	NA	NA	intronic	ENSG00000182010	NA	NA	NA	NA	NA	10q21.2	NA	NA	NA	NA	rs3815999	0.77	0.77	0.764	0.717851	0.7515	0.8879	0.7983	0.6286	0.5716	0.76	0.9	0.78	0.61	0.7548	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.347336	NA	NA	0.758046	0.654789	NA	0.652	NA	1.735654
1479	5	479905	479905	A	C	intronic	SLC9A3	NA	NA	NA	ncRNA_exonic	ENSG00000225138	NA	NA	NA	NA	NA	5p15.33	NA	NA	NA	NA	rs890986	0.79	0.79	0.786	0.792332	0.8728	0.5694	0.8084	0.9274	0.7454	0.87	0.54	0.83	0.91	0.8458	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.316901	NA	NA	0.883721	0.916402	NA	0.471	NA	1.7310123
1479	10	135371466	135371466	T	C	intronic	SYCE1	NA	NA	NA	intronic	ENSG00000171772,ENSG00000203772	NA	NA	NA	NA	NA	10q26.3	NA	NA	NA	NA	rs2987792	0.55	0.55	0.513	0.509185	0.7684	0.5317	0.6369	0.1354	0.6339	0.77	0.54	0.63	0.18	0.705	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.272088	NA	NA	0.795698	0.224921	NA	0.464	NA	1.730902
1479	3	184045799	184045799	A	G	intronic	EIF4G1	NA	NA	NA	intronic	ENSG00000114867,ENSG00000145191	NA	NA	NA	NA	NA	3q27.1	NA	NA	NA	NA	rs939317	0.79	0.79	0.811	0.786941	0.7535	0.7103	0.7911	0.9592	0.6646	0.76	0.72	0.77	0.95	0.7582	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.871409	NA	NA	0.757442	0.919201	NA	0.87	NA	1.730858
1479	16	50327456	50327456	C	T	intronic	ADCY7	NA	NA	NA	intronic	ENSG00000121281	NA	NA	NA	NA	NA	16q12.1	NA	NA	NA	NA	rs2302713	0.6	0.6	0.611	0.5623	0.7903	0.1954	0.6282	0.7057	0.4652	0.79	0.19	0.67	0.75	0.676	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.788118	NA	NA	0.803721	0.715521	NA	0.681	NA	1.729979
1479	19	50909389	50909389	T	G	intronic	POLD1	NA	NA	NA	intronic	ENSG00000062822	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs1673041	0.7	0.7	0.697	0.704473	0.7704	0.3075	0.7983	0.9236	0.683	0.79	0.33	0.78	0.92	0.7349	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.038694	NA	NA	0.765465	0.899455	NA	0.746	NA	1.729235
1479	17	42268274	42268274	C	T	UTR3	TMUB2	NM_001076674:c.*42C>T,NM_024107:c.*42C>T,NM_177441:c.*42C>T	NA	NA	UTR3	ENSG00000168591	ENST00000446571:c.*42C>T,ENST00000357984:c.*42C>T,ENST00000538716:c.*42C>T,ENST00000587989:c.*42C>T,ENST00000590235:c.*374C>T,ENST00000319511:c.*42C>T,ENST00000589785:c.*42C>T,ENST00000592825:c.*374C>T,ENST00000589184:c.*223C>T,ENST00000587326:c.*530C>T,ENST00000587172:c.*374C>T	NA	NA	NA	NA	17q21.31	NA	NA	NA	NA	rs757430	0.94	0.94	0.947	0.929113	0.8549	0.997	0.9323	0.9917	0.8487	0.87	1	0.91	0.99	0.8859	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.165301	2.165301	NA	0.864651	0.974807	NA	0.949	NA	1.7278824
1479	10	63982984	63982984	A	G	intronic	RTKN2	NA	NA	NA	intronic	ENSG00000182010	NA	NA	NA	NA	NA	10q21.2	NA	NA	NA	NA	rs10740069	0.8	0.8	0.796	0.753994	0.7525	0.8988	0.8098	0.7549	0.5654	0.76	0.91	0.8	0.73	0.7622	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.75582	NA	NA	0.75838	0.7399	NA	0.667	NA	1.72692
1479	9	35101870	35101870	C	G	intronic	STOML2	NA	NA	NA	intronic	ENSG00000165283	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs693325	0.68	0.68	0.663	0.666134	0.7624	0.4583	0.8184	0.6165	0.7403	0.78	0.49	0.81	0.64	0.736	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.952353	NA	NA	0.77593	0.641625	ID=COSN168538;OCCURENCE=1(large_intestine)	0.754	NA	1.72567
1479	9	27047246	27047246	T	C	intronic	IFT74	NA	NA	NA	intronic	ENSG00000096872	NA	NA	NA	NA	NA	9p21.2	NA	NA	NA	NA	rs10812520	0.79	0.79	0.784	0.778155	0.7425	0.876	0.7867	0.7723	0.7157	0.73	0.89	0.79	0.78	0.7725	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.64724	NA	NA	0.759922	0.773965	NA	0.812	NA	1.725078
1480	15	48720526	48720526	G	C	intronic	FBN1	NA	NA	NA	intronic	ENSG00000166147	NA	NA	NA	NA	NA	15q21.1	NA	NA	NA	NA	rs363832	0.66	0.66	0.618	0.65595	0.7584	0.6508	0.7363	0.4221	0.8149	0.76	0.63	0.76	0.46	0.7404	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.850883	NA	NA	0.777118	0.485441	NA	0.71	NA	1.724082
1480	2	197171175	197171175	C	T	intronic	HECW2	NA	NA	NA	intronic	ENSG00000138411	NA	NA	NA	NA	NA	2q32.3	NA	NA	NA	NA	rs4241189	0.77	0.77	0.754	0.7498	0.7634	0.9603	0.8012	0.5295	0.7802	0.76	0.95	0.76	0.57	0.7586	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.633618	NA	NA	0.754651	0.541761	NA	0.667	NA	1.723349
1480	3	194386881	194386881	A	G	intronic	LSG1	NA	NA	NA	intronic	ENSG00000041802	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs1675944	0.76	0.76	0.749	0.765575	0.7654	0.9395	0.745	0.5825	0.8487	0.77	0.93	0.73	0.57	0.7655	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.557219	NA	NA	0.746977	0.627099	NA	0.681	NA	1.722123
1480	3	194390713	194390713	C	A	intronic	LSG1	NA	NA	NA	intronic	ENSG00000041802	NA	NA	NA	NA	NA	3q29	NA	NA	NA	NA	rs1675926	0.77	0.77	0.756	0.773562	0.7654	0.9395	0.7522	0.612	0.8446	0.77	0.93	0.74	0.59	0.7661	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.412413	NA	NA	0.746744	0.642079	NA	0.688	NA	1.721756
1480	10	134165291	134165291	C	G	intronic	LRRC27	NA	NA	NA	intronic	ENSG00000148814	NA	NA	NA	NA	NA	10q26.3	NA	NA	NA	NA	rs2261222	0.8	0.8	0.789	0.800919	0.7535	0.8661	0.781	0.8207	0.7699	0.75	0.83	0.78	0.84	0.7737	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.585756	NA	NA	0.751397	0.804506	NA	0.493	NA	1.721403
1480	20	2618094	2618094	G	A	intronic	TMC2	NA	NA	NA	intronic	ENSG00000149488	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs6037181	0.77	0.77	0.76	0.778954	0.7515	0.8581	0.7983	0.6823	0.8425	0.75	0.86	0.81	0.67	0.7763	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.217165	NA	NA	0.750814	0.699955	NA	0.725	NA	1.721386
1480	21	45817620	45817620	T	C	intronic	TRPM2	NA	NA	NA	intronic	ENSG00000142185	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs1785436	0.79	0.79	0.781	0.767173	0.7634	0.7946	0.8084	0.8207	0.6411	0.76	0.8	0.8	0.84	0.7587	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.308761	NA	NA	0.75664	0.816447	NA	0.674	NA	1.72126
1480	20	2616679	2616679	C	G	intronic	TMC2	NA	NA	NA	intronic	ENSG00000149488	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs2422808	0.77	0.77	0.781	0.778754	0.7515	0.8571	0.7983	0.6823	0.8425	0.75	0.86	0.81	0.67	0.777	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.463322	NA	NA	0.751047	0.700182	NA	0.732	NA	1.720453
1480	10	64000878	64000878	T	G	intronic	RTKN2	NA	NA	NA	intronic	ENSG00000182010	NA	NA	NA	NA	NA	10q21.2	NA	NA	NA	NA	rs1368158	0.8	0.8	0.803	0.751597	0.7525	0.8879	0.8098	0.7542	0.5654	0.76	0.9	0.8	0.73	0.7676	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.188967	3.188967	NA	0.759748	0.740227	NA	0.674	NA	1.720152
1480	15	42363769	42363769	A	G	intronic	PLA2G4D	NA	NA	NA	intronic	ENSG00000159337	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs1668589	0.67	0.67	0.645	0.640176	0.7644	0.5833	0.7939	0.5068	0.6421	0.77	0.58	0.81	0.54	0.7382	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.437132	2.437132	NA	0.777506	0.580118	NA	0.565	NA	1.719894
1480	4	169835048	169835048	C	G	intronic	PALLD	NA	NA	NA	intronic	ENSG00000129116,ENSG00000145439	NA	NA	NA	NA	NA	4q32.3	NA	NA	NA	NA	rs1532651	0.7	0.7	0.706	0.707069	0.7714	0.9643	0.7003	0.3949	0.8027	0.75	0.92	0.66	0.38	0.7567	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.459113	NA	NA	0.752442	0.448706	NA	0.623	NA	1.719458
1480	5	176733616	176733616	T	C	UTR3	MXD3,PRELID1	NM_001142935:c.*504A>G;NM_001271828:c.*45T>C,NM_013237:c.*45T>C	NA	NA	UTR3	ENSG00000169230,ENSG00000213347	ENST00000303204:c.*45T>C,ENST00000504594:c.*331T>C,ENST00000503216:c.*45T>C;ENST00000427908:c.*504A>G	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs9834	0.78	0.78	0.764	0.780351	0.8877	0.4742	0.7983	0.9478	0.7464	0.89	0.47	0.82	0.95	0.8375	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.868801	NA	NA	0.889373	0.945958	NA	0.87	NA	1.7187604
1480	20	2616556	2616556	T	C	intronic	TMC2	NA	NA	NA	intronic	ENSG00000149488	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs910271	0.78	0.78	0.772	0.786542	0.7515	0.8571	0.7997	0.711	0.8425	0.75	0.86	0.81	0.71	0.7787	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.904666	1.904666	NA	0.751395	0.718566	NA	0.739	NA	1.718405
1480	4	169846255	169846255	T	C	intronic	PALLD	NA	NA	NA	intronic	ENSG00000129116,ENSG00000145439	NA	NA	NA	NA	NA	4q32.3	NA	NA	NA	NA	rs3733656	0.73	0.73	0.72	0.714457	0.7704	0.9643	0.7017	0.4236	0.8016	0.79	0.95	0.69	0.43	0.7599	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.91104	NA	NA	0.752093	0.485701	NA	0.63	NA	1.717607
1480	17	5066305	5066305	A	T	intronic	USP6	NA	NA	NA	intronic	ENSG00000129204	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs2307138	0.61	0.61	0.598	0.577276	0.7763	0.3968	0.6974	0.674	0.3425	0.75	0.36	0.69	0.62	0.6994	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.23755	NA	NA	0.80686	0.701089	NA	0.703	NA	1.71744
1480	7	107824678	107824678	A	G	intronic	NRCAM	NA	NA	NA	intronic	ENSG00000091129	NA	NA	NA	NA	NA	7q31.1	NA	NA	NA	NA	rs6970656	0.72	0.72	0.706	0.688698	0.7644	0.9554	0.7983	0.3457	0.7219	0.77	0.94	0.77	0.34	0.7487	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.132289	NA	NA	0.77	0.440082	NA	0.667	NA	1.7169
1480	19	1074252	1074252	T	G	intronic	HMHA1	NA	NA	NA	intronic	ENSG00000180448	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs11084881	0.79	0.79	0.764	0.782947	0.7396	0.6478	0.8444	0.9463	0.7025	0.75	0.69	0.82	0.93	0.7834	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.133588	NA	NA	0.760526	0.912579	NA	0.79	NA	1.716474
1480	20	20071634	20071634	T	C	intronic	C20orf26	NA	NA	NA	intronic	ENSG00000089101	NA	NA	NA	NA	NA	20p11.23	NA	NA	NA	NA	rs6046614	0.86	0.86	0.866	0.867412	0.7435	0.9881	0.8977	0.851	0.8712	0.75	0.99	0.88	0.86	0.8045	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.944157	NA	NA	0.736163	0.8468	NA	0.804	NA	1.715837
1481	7	107822396	107822396	G	A	intronic	NRCAM	NA	NA	NA	intronic	ENSG00000091129	NA	NA	NA	NA	NA	7q31.1	NA	NA	NA	NA	rs2142325	0.72	0.72	0.693	0.688299	0.7644	0.9554	0.7983	0.3442	0.7219	0.77	0.94	0.77	0.34	0.7517	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.473774	NA	NA	0.769651	0.439855	NA	0.667	NA	1.714249
1481	12	123647725	123647725	G	C	intronic	MPHOSPH9	NA	NA	NA	intronic	ENSG00000051825	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs1727296	0.68	0.68	0.631	0.633586	0.7684	0.9772	0.7262	0.1422	0.7393	0.77	0.97	0.72	0.17	0.7322	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.755427	NA	NA	0.785415	0.255223	NA	0.609	NA	1.713985
1481	10	72813306	72813306	G	A	intergenic	PCBD1,UNC5B	dist=164765;dist=158986	NA	NA	intergenic	ENSG00000259267,ENSG00000107731	dist=97908;dist=159021	NA	NA	NA	NA	10q22.1	NA	NA	NA	NA	rs10762420	0.54	0.54	0.526	0.545327	0.5408	0.6081	0.4784	0.553	0.5225	0.54	0.59	0.48	0.54	0.5331	0.59	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.180166	NA	NA	0.545706	0.560502	NA	0.493	NA	1.7137274
1481	17	37239671	37239671	A	G	intronic	PLXDC1	NA	NA	NA	ncRNA_intronic	ENSG00000263818	NA	NA	NA	NA	NA	17q12	NA	NA	NA	NA	rs9891236	0.84	0.84	0.832	0.853834	0.8767	0.6558	0.9481	0.9955	0.7761	0.87	0.61	0.94	0.99	0.8606	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.204735	NA	NA	0.882326	0.970268	NA	0.884	NA	1.7137073
1481	11	116703640	116703640	G	C	UTR3	APOC3	NM_000040:c.*40G>C	NA	NA	UTR3	ENSG00000110245	ENST00000227667:c.*40G>C,ENST00000375345:c.*40G>C	NA	NA	NA	NA	11q23.3	NA	NA	NA	NA	rs5128	0.81	0.81	0.804	0.765775	0.8757	0.6627	0.7709	0.8351	0.6616	0.88	0.65	0.84	0.86	0.8389	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.502553	1.502553	NA	0.905843	0.845525	NA	0.841	NA	1.7128904
1481	12	123651162	123651162	A	G	intronic	MPHOSPH9	NA	NA	NA	intronic	ENSG00000051825	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs1716167	0.68	0.68	0.635	0.633986	0.7684	0.9772	0.7262	0.1437	0.7393	0.77	0.98	0.72	0.17	0.7333	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.342899	NA	NA	0.785698	0.256015	NA	0.601	NA	1.712602
1481	7	107825108	107825108	T	C	intronic	NRCAM	NA	NA	NA	intronic	ENSG00000091129	NA	NA	NA	NA	NA	7q31.1	NA	NA	NA	NA	rs427909	0.72	0.72	0.699	0.688698	0.7644	0.9554	0.7983	0.3457	0.7219	0.77	0.94	0.77	0.34	0.755	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.371215	NA	NA	0.768864	0.441163	NA	0.667	NA	1.711736
1481	2	95945568	95945568	G	A	intronic	PROM2	NA	NA	NA	intronic	ENSG00000155066	NA	NA	NA	NA	NA	2q11.1	NA	NA	NA	NA	rs7585914	0.78	0.78	0.772	0.786142	0.7594	0.6687	0.8631	0.8812	0.7515	0.75	0.68	0.89	0.87	0.7752	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.079794	NA	NA	0.753721	0.848389	NA	0.797	NA	1.711679
1481	5	96127905	96127905	T	C	intronic	ERAP1	NA	NA	NA	intronic	ENSG00000164307	NA	NA	NA	NA	NA	5q15	NA	NA	NA	NA	rs27640	0.65	0.65	0.652	0.650759	0.7883	0.5456	0.7118	0.5825	0.6667	0.79	0.51	0.7	0.55	0.7203	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.665506	1.665506	NA	0.780116	0.603268	NA	0.681	NA	1.711284
1481	1	85128262	85128262	A	G	intronic	SSX2IP	NA	NA	NA	intronic	ENSG00000117155	NA	NA	NA	NA	NA	1p22.3	NA	NA	NA	NA	rs2911563	0.73	0.73	0.715	0.678115	0.7893	0.7202	0.6326	0.6309	0.6166	0.81	0.72	0.67	0.66	0.7289	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.633619	NA	NA	0.770591	0.646524	NA	0.688	NA	1.711209
1481	9	432330	432330	C	G	intronic	DOCK8	NA	NA	NA	intronic	ENSG00000107099	NA	NA	NA	NA	NA	9p24.3	NA	NA	NA	NA	rs7036567	0.75	0.75	0.733	0.714257	0.7724	0.9772	0.8127	0.4501	0.6708	0.78	0.98	0.79	0.43	0.7577	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.297933	NA	NA	0.759651	0.492737	NA	0.659	NA	1.710249
1481	9	35077441	35077441	T	C	intronic	FANCG	NA	NA	NA	intronic	ENSG00000221829	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs554098	0.7	0.7	0.687	0.701478	0.7694	0.4534	0.8372	0.7368	0.7434	0.77	0.49	0.83	0.75	0.7459	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.215347	NA	NA	0.774884	0.736496	ID=COSN168536;OCCURENCE=1(large_intestine)	0.797	NA	1.709816
1481	1	109735504	109735504	T	C	intronic	KIAA1324	NA	NA	NA	intronic	ENSG00000116299	NA	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	rs659659	0.75	0.75	0.729	0.741414	0.7565	0.998	0.8055	0.3593	0.9325	0.78	1	0.8	0.39	0.7835	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.569177	NA	NA	0.751512	0.412165	NA	0.768	NA	1.708488
1481	3	122843110	122843110	G	T	intronic	PDIA5	NA	NA	NA	intronic	ENSG00000065485	NA	NA	NA	NA	NA	3q21.1	NA	NA	NA	NA	rs861375	0.63	0.63	0.61	0.600839	0.7833	0.5139	0.719	0.469	0.5971	0.77	0.51	0.75	0.48	0.7216	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.302375	NA	NA	0.787093	0.506809	NA	0.746	NA	1.708007
1481	4	47582387	47582387	A	C	intronic	ATP10D	NA	NA	NA	intronic	ENSG00000145246	NA	NA	NA	NA	NA	4p12	NA	NA	NA	NA	rs2351791	0.75	0.75	0.738	0.741613	0.7734	0.7073	0.7147	0.7595	0.7393	0.78	0.71	0.75	0.76	0.7609	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.8047	NA	NA	0.758023	0.764412	NA	0.761	NA	1.707677
1482	1	114641685	114641685	A	G	intronic	SYT6	NA	NA	NA	intronic	ENSG00000134207	NA	NA	NA	NA	NA	1p13.2	NA	NA	NA	NA	rs2774285	0.83	0.83	0.851	0.857827	0.7396	0.9325	0.7392	0.9652	0.8415	0.74	0.94	0.69	0.95	0.7975	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.318032	NA	NA	0.758953	0.921698	NA	0.833	NA	1.703947
1482	12	123746357	123746357	C	G	intronic	CDK2AP1	NA	NA	NA	intronic	ENSG00000111328	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs4759416	0.68	0.68	0.641	0.650559	0.7684	0.998	0.7277	0.149	0.7945	0.76	1	0.72	0.17	0.7408	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.838983	1.838983	NA	0.786977	0.263277	NA	0.601	NA	1.703823
1482	6	7567970	7567970	C	T	intronic	DSP	NA	NA	NA	intronic	ENSG00000096696	NA	NA	NA	NA	NA	6p24.3	NA	NA	NA	NA	rs2076296	0.79	0.79	0.795	0.772764	0.7644	0.8006	0.7896	0.8222	0.6738	0.75	0.84	0.77	0.81	0.7586	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.426589	NA	NA	0.775233	0.795733	NA	0.754	NA	1.701767
1482	16	57998345	57998345	C	T	intronic	CNGB1	NA	NA	NA	intronic	ENSG00000070729	NA	NA	NA	NA	NA	16q21	NA	NA	NA	NA	rs3859043	0.73	0.73	0.682	0.701877	0.7634	0.8214	0.8314	0.4985	0.6984	0.77	0.83	0.83	0.47	0.7626	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.098743	NA	NA	0.772749	0.577952	NA	0.746	NA	1.701251
1482	1	33760743	33760743	T	C	intronic	ZNF362	NA	NA	NA	intronic	ENSG00000160094	NA	NA	NA	NA	NA	1p35.1	NA	NA	NA	NA	rs4641276	0.82	0.82	0.821	0.817292	0.7584	0.7589	0.8357	0.9713	0.7168	0.77	0.76	0.83	0.95	0.7866	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.056349	NA	NA	0.755465	0.936677	NA	0.833	NA	1.699535
1482	17	4863410	4863410	A	G	intronic	SPAG7	NA	NA	NA	UTR3	ENSG00000091640	ENST00000575784:c.*21T>C	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs238224	0.74	0.74	0.727	0.702875	0.829	0.4702	0.8588	0.823	0.5399	0.83	0.48	0.86	0.84	0.7838	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.658271	NA	NA	0.854882	0.830495	NA	0.812	NA	1.6989847
1482	11	4185595	4185595	T	G	intergenic	RRM1,LOC100506082	dist=25489;dist=22787	NA	NA	intergenic	ENSG00000231548,ENSG00000254480	dist=17070;dist=22775	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs979942	0.43	0.43	0.445	0.454473	0.5507	0.3075	0.3804	0.4266	0.5971	0.56	0.3	0.38	0.45	0.5288	0.56	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.616544	NA	NA	0.555304	0.470252	NA	0.312	NA	1.6985294
1482	10	15648243	15648243	C	T	intronic	ITGA8	NA	NA	NA	intronic	ENSG00000077943	NA	NA	NA	NA	NA	10p13	NA	NA	NA	NA	rs2282383	0.7	0.7	0.712	0.725439	0.7654	0.7659	0.6326	0.5893	0.8926	0.77	0.75	0.65	0.58	0.7501	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.739835	NA	NA	0.786512	0.620291	NA	0.79	NA	1.697988
1482	13	32758834	32758834	A	G	intronic	FRY	NA	NA	NA	intronic	ENSG00000073910	NA	NA	NA	NA	NA	13q13.1	NA	NA	NA	NA	rs798971	0.81	0.81	0.817	0.821685	0.7604	0.9762	0.7421	0.7579	0.8681	0.76	0.98	0.7	0.79	0.7885	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.585589	NA	NA	0.753112	0.779743	NA	0.862	NA	1.697988
1482	1	14149622	14149622	T	C	intronic	PRDM2	NA	NA	NA	intronic	ENSG00000116731	NA	NA	NA	NA	NA	1p36.21	NA	NA	NA	NA	rs2697968	0.74	0.74	0.734	0.714657	0.7893	0.621	0.7723	0.7307	0.6718	0.8	0.64	0.79	0.75	0.751	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.129382	NA	NA	0.761725	0.727679	NA	0.768	NA	1.697975
1482	2	33623388	33623388	T	C	intronic	LTBP1	NA	NA	NA	intronic	ENSG00000049323	NA	NA	NA	NA	NA	2p22.3	NA	NA	NA	NA	rs624058	0.72	0.72	0.786	0.780751	0.7903	0.749	0.8069	0.9297	0.5838	0.69	0.7	0.73	0.76	0.7746	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.521728	NA	NA	0.737209	0.885384	NA	NA	NA	1.697891
1482	3	145838895	145838895	C	T	intronic	PLOD2	NA	NA	NA	intronic	ENSG00000152952	NA	NA	NA	NA	NA	3q24	NA	NA	NA	NA	rs4681297	0.78	0.78	0.782	0.781749	0.7684	0.8353	0.7305	0.8185	0.727	0.76	0.83	0.74	0.8	0.7666	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.166225	NA	NA	0.767326	0.812301	NA	0.754	NA	1.697674
1482	2	33623387	33623387	A	G	intronic	LTBP1	NA	NA	NA	intronic	ENSG00000049323	NA	NA	NA	NA	NA	2p22.3	NA	NA	NA	NA	rs624060	0.71	0.71	0.786	0.780751	0.7903	0.749	0.8069	0.9297	0.5838	0.68	0.69	0.72	0.76	0.7747	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.129874	NA	NA	0.738256	0.882887	NA	NA	NA	1.696744
1482	12	123694724	123694724	C	T	intronic	MPHOSPH9	NA	NA	NA	intronic	ENSG00000051825	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs2682434	0.69	0.69	0.641	0.651957	0.7714	0.998	0.732	0.152	0.7914	0.77	1	0.73	0.17	0.745	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.455415	NA	NA	0.787558	0.268044	NA	0.609	NA	1.696042
1482	1	20972048	20972048	G	A	intronic	PINK1	NA	NA	NA	ncRNA_intronic	ENSG00000117242	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs3131713	0.83	0.83	0.82	0.820687	0.8956	0.8145	0.8026	0.7352	0.8783	0.89	0.82	0.84	0.73	0.8628	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.726139	NA	NA	0.879651	0.775079	NA	0.812	NA	1.6952823
1483	1	89520574	89520574	C	A	intronic	GBP1	NA	NA	NA	intronic	ENSG00000117228	NA	NA	NA	NA	NA	1p22.2	NA	NA	NA	NA	rs10922554	0.7	0.7	0.705	0.71885	0.7694	0.5585	0.6153	0.7958	0.8016	0.77	0.54	0.68	0.78	0.7497	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.154744	NA	NA	0.788256	0.814344	NA	0.725	NA	1.692644
1483	1	220825523	220825523	A	G	intronic	MARK1	NA	NA	NA	intronic	ENSG00000116141	NA	NA	NA	NA	NA	1q41	NA	NA	NA	NA	rs3737296	0.76	0.76	0.763	0.795128	0.7704	0.6518	0.6988	0.9841	0.7812	0.75	0.6	0.71	0.98	0.7643	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.17022	NA	NA	0.772907	0.946891	NA	0.717	NA	1.692393
1483	1	76344011	76344011	C	A	intronic	MSH4	NA	NA	NA	intronic	ENSG00000057468	NA	NA	NA	NA	NA	1p31.1	NA	NA	NA	NA	rs1493367	0.8	0.8	0.79	0.792732	0.7515	0.9851	0.7781	0.6846	0.7935	0.77	0.99	0.76	0.66	0.7967	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.889151	NA	NA	0.759419	0.705402	NA	0.725	NA	1.692381
1483	9	116958216	116958216	C	T	intronic	COL27A1	NA	NA	NA	intronic	ENSG00000196739	NA	NA	NA	NA	NA	9q32	NA	NA	NA	NA	rs2567711	0.68	0.68	0.671	0.703874	0.7753	0.504	0.7738	0.6815	0.817	0.79	0.47	0.8	0.68	0.7586	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.800678	NA	NA	0.775814	0.715842	NA	0.616	NA	1.690286
1483	15	63044637	63044637	A	G	intronic	TLN2	NA	NA	NA	intronic	ENSG00000171914	NA	NA	NA	NA	NA	15q22.2	NA	NA	NA	NA	rs7176359	0.73	0.73	0.683	0.720847	0.7893	0.6825	0.8372	0.5711	0.8098	0.8	0.71	0.82	0.59	0.7568	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.083199	NA	NA	0.76407	0.632547	NA	0.674	NA	1.68983
1483	10	115525175	115525175	T	C	intronic	PLEKHS1	NA	NA	NA	intronic	ENSG00000148735	NA	NA	NA	NA	NA	10q25.3	NA	NA	NA	NA	rs4631835	0.67	0.67	0.647	0.650359	0.7942	0.5694	0.7608	0.5212	0.682	0.81	0.58	0.75	0.52	0.7415	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.180348	NA	NA	0.774987	0.553653	NA	0.63	NA	1.689313
1483	3	189712089	189712089	G	A	intronic	LEPREL1	NA	NA	NA	intronic	ENSG00000090530	NA	NA	NA	NA	NA	3q28	NA	NA	NA	NA	rs1719599	0.68	0.68	0.75	0.760982	0.7694	0.9355	0.7781	0.6172	0.7546	0.67	0.85	0.7	0.49	0.7847	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.178773	NA	NA	0.756628	0.582652	NA	NA	NA	1.689272
1483	1	20978832	20978832	T	C	UTR3	DDOST	NM_005216:c.*40A>G	NA	NA	UTR3	ENSG00000244038	ENST00000375048:c.*40A>G,ENST00000602624:c.*40A>G,ENST00000415136:c.*40A>G	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs6893	0.83	0.83	0.805	0.82488	0.8936	0.8274	0.804	0.7421	0.8783	0.89	0.83	0.84	0.75	0.8695	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.817904	NA	NA	0.881251	0.771344	NA	0.819	NA	1.6889824
1483	9	110086149	110086149	G	A	intronic	RAD23B	NA	NA	NA	intronic	ENSG00000119318	NA	NA	NA	NA	NA	9q31.2	NA	NA	NA	NA	rs1805334	0.77	0.77	0.804	0.803714	0.7823	0.7619	0.6441	0.9508	0.7832	0.75	0.77	0.69	0.83	0.7501	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.529007	NA	NA	0.778721	0.903636	NA	0.746	NA	1.688879
1483	12	21711111	21711111	G	C	intronic	GYS2	NA	NA	NA	intronic	ENSG00000111713	NA	NA	NA	NA	NA	12p12.1	NA	NA	NA	NA	rs7977474	0.73	0.73	0.715	0.715655	0.7704	0.7629	0.7522	0.5492	0.8098	0.79	0.77	0.74	0.58	0.7661	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.564269	NA	NA	0.775	0.605311	NA	0.572	NA	1.6885
1483	1	204433093	204433093	A	C	intronic	PIK3C2B	NA	NA	NA	intronic	ENSG00000133056	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs2271415	0.58	0.58	0.522	0.548922	0.7813	0.4236	0.8098	0.2474	0.6616	0.78	0.43	0.79	0.29	0.7149	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.053575	NA	NA	0.81593	0.361552	NA	0.63	NA	1.68787
1483	22	41863423	41863423	A	G	intronic	PHF5A	NA	NA	NA	intronic	ENSG00000100410	NA	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs202631	0.77	0.77	0.777	0.741613	0.7783	0.9444	0.5303	0.7663	0.6115	0.78	0.94	0.52	0.72	0.7449	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.171556	NA	NA	0.789186	0.772356	NA	0.681	NA	1.687614
1483	15	82431219	82431219	A	G	intronic	EFTUD1	NA	NA	NA	intronic	ENSG00000140598	NA	NA	NA	NA	NA	15q25.2	NA	NA	NA	NA	rs2457497	0.82	0.82	0.8	0.784744	0.7555	0.8373	0.8458	0.8714	0.6002	0.74	0.83	0.82	0.9	0.779	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.389886	NA	NA	0.7793	0.852909	NA	0.797	NA	1.6862
1483	4	42003835	42003835	C	G	intronic	SLC30A9	NA	NA	NA	intronic	ENSG00000014824	NA	NA	NA	NA	NA	4p13	NA	NA	NA	NA	rs2581453	0.7	0.7	0.658	0.65595	0.7763	0.9583	0.7997	0.1475	0.8057	0.79	0.96	0.78	0.17	0.7628	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.437833	NA	NA	0.775372	0.25	NA	0.558	NA	1.685528
1483	4	42024982	42024982	A	G	intronic	SLC30A9	NA	NA	NA	intronic	ENSG00000014824	NA	NA	NA	NA	NA	4p13	NA	NA	NA	NA	rs13107768	0.71	0.71	0.658	0.667133	0.7763	0.9583	0.804	0.1884	0.8047	0.79	0.96	0.79	0.22	0.7628	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.490931	NA	NA	0.775413	0.282104	NA	0.558	NA	1.685487
1484	12	21712574	21712574	C	T	intronic	GYS2	NA	NA	NA	intronic	ENSG00000111713	NA	NA	NA	NA	NA	12p12.1	NA	NA	NA	NA	rs1871137	0.75	0.75	0.738	0.740615	0.7704	0.7629	0.7579	0.6407	0.8098	0.79	0.77	0.75	0.68	0.7681	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.692009	NA	NA	0.776769	0.676203	NA	0.58	NA	1.684731
1484	10	125526689	125526689	G	A	intronic	CPXM2	NA	NA	NA	intronic	ENSG00000121898	NA	NA	NA	NA	NA	10q26.13	NA	NA	NA	NA	rs1896392	0.67	0.67	0.648	0.645767	0.7922	0.5823	0.7406	0.5023	0.6871	0.8	0.58	0.75	0.52	0.7389	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.015324	NA	NA	0.784419	0.545847	NA	0.63	NA	1.684481
1484	12	123665695	123665695	A	G	intronic	MPHOSPH9	NA	NA	NA	intronic	ENSG00000051825	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs1727306	0.69	0.69	0.649	0.654553	0.7753	0.998	0.7363	0.1551	0.7935	0.77	1	0.73	0.17	0.7481	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.594905	NA	NA	0.792907	0.27281	NA	0.623	NA	1.683693
1484	9	73442724	73442724	C	T	intronic	TRPM3	NA	NA	NA	intronic	ENSG00000083067	NA	NA	NA	NA	NA	9q21.12	NA	NA	NA	NA	rs1034538	0.76	0.76	0.768	0.766174	0.7763	0.5427	0.8026	0.9569	0.7025	0.77	0.54	0.82	0.96	0.762	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.059196	NA	NA	0.778721	0.909442	NA	0.833	NA	1.682979
1484	6	118475798	118475798	G	A	intronic	SLC35F1	NA	NA	NA	intronic	ENSG00000196376	NA	NA	NA	NA	NA	6q22.2	NA	NA	NA	NA	rs205966	0.71	0.71	0.718	0.761981	0.7594	0.4762	0.8127	0.8464	0.909	0.75	0.49	0.8	0.85	0.7771	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.935921	NA	NA	0.781395	0.839991	NA	0.754	NA	1.682105
1484	9	18950980	18950980	A	T	intronic	FAM154A	NA	NA	NA	intronic	ENSG00000155875	NA	NA	NA	NA	NA	9p22.1	NA	NA	NA	NA	rs6475274	0.75	0.75	0.746	0.772564	0.7734	0.5685	0.7032	0.9539	0.7863	0.76	0.57	0.73	0.93	0.7613	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.68579	NA	NA	0.783256	0.929187	NA	0.71	NA	1.682044
1484	1	201044748	201044748	A	G	intronic	CACNA1S	NA	NA	NA	intronic	ENSG00000081248	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs1998721	0.75	0.75	0.734	0.759585	0.7604	0.9643	0.7536	0.4955	0.909	0.77	0.95	0.75	0.51	0.7814	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.411488	NA	NA	0.776977	0.559464	NA	0.674	NA	1.681223
1484	11	126315024	126315024	T	C	intronic	KIRREL3	NA	NA	NA	intronic	ENSG00000149571	NA	NA	NA	NA	NA	11q24.2	NA	NA	NA	NA	rs3802819	0.67	0.67	0.648	0.642772	0.7734	0.5605	0.6931	0.6157	0.5941	0.8	0.56	0.69	0.6	0.734	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.283994	NA	NA	0.812128	0.690315	NA	0.732	NA	1.680472
1484	17	72346736	72346736	C	T	intronic	KIF19	NA	NA	NA	intronic	ENSG00000196169	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs12451539	0.62	0.62	0.567	0.601637	0.7823	0.7411	0.7478	0.1566	0.7699	0.77	0.72	0.73	0.18	0.7439	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.138945	NA	NA	0.794809	0.250567	NA	0.587	NA	1.678991
1484	2	182350743	182350743	A	G	intronic	ITGA4	NA	NA	NA	intronic	ENSG00000115232	NA	NA	NA	NA	NA	2q31.3	NA	NA	NA	NA	rs155103	0.72	0.72	0.72	0.694089	0.7962	0.6498	0.7911	0.6876	0.5746	0.8	0.63	0.8	0.67	0.7439	0.8	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.783169	NA	NA	0.782694	0.720758	NA	0.725	NA	1.677206
1484	9	117033096	117033096	C	T	intronic	COL27A1	NA	NA	NA	intronic	ENSG00000196739	NA	NA	NA	NA	NA	9q32	NA	NA	NA	NA	rs2636866	0.79	0.79	0.809	0.788538	0.7704	0.6121	0.8213	0.9871	0.6973	0.76	0.63	0.83	0.99	0.7805	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.756388	NA	NA	0.773605	0.955288	NA	0.812	NA	1.675495
1485	9	35100569	35100569	A	G	intronic	STOML2	NA	NA	NA	intronic	ENSG00000165283	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs586017	0.7	0.7	0.675	0.696486	0.7803	0.4603	0.8357	0.6959	0.7556	0.79	0.5	0.83	0.71	0.7563	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.706397	2.706397	NA	0.79093	0.707898	NA	0.79	NA	1.67247
1485	15	60678298	60678298	T	A	intronic	ANXA2	NA	NA	NA	UTR5	ENSG00000182718	ENST00000560014:c.-24A>T	NA	NA	NA	NA	15q22.2	NA	NA	NA	NA	rs11855679	0.83	0.83	0.81	0.838458	0.829	0.999	0.8689	0.6188	0.9581	0.83	1	0.86	0.61	0.8444	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.181192	NA	NA	0.822558	0.638221	NA	0.739	NA	1.6707087
1485	5	176306676	176306676	G	A	intronic	UNC5A	NA	NA	NA	intronic	ENSG00000113763	NA	NA	NA	NA	NA	5q35.2	NA	NA	NA	NA	rs2292257	0.57	0.57	0.531	0.553914	0.8042	0.502	0.5677	0.2867	0.7014	0.8	0.47	0.6	0.3	0.7167	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.117691	NA	NA	0.809286	0.367077	NA	0.428	NA	1.669814
1485	8	124665211	124665211	C	T	upstream	KLHL38	NA	NA	NA	ncRNA_intronic	ENSG00000253286	NA	NA	NA	NA	NA	8q24.13	NA	NA	NA	NA	rs7387855	0.75	0.75	0.76	0.727636	0.8579	0.7113	0.7118	0.6694	0.7004	0.86	0.7	0.73	0.65	0.7943	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.310962	NA	NA	0.847059	0.721154	NA	0.826	NA	1.6674076
1485	1	21801346	21801346	G	A	intronic	NBPF3	NA	NA	NA	intronic	ENSG00000142794	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs7531217	0.74	0.74	0.709	0.749601	0.7724	0.8125	0.7925	0.5371	0.9182	0.77	0.78	0.82	0.57	0.7819	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.184071	NA	NA	0.778721	0.57172	NA	0.717	NA	1.666979
1485	10	7773976	7773976	A	G	intronic	ITIH2	NA	NA	NA	intronic	ENSG00000151655	NA	NA	NA	NA	NA	10p14	NA	NA	NA	NA	rs7098319	0.75	0.75	0.741	0.715256	0.8042	0.6954	0.8718	0.6891	0.5685	0.8	0.72	0.86	0.62	0.7576	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.351513	NA	NA	0.771628	0.702678	NA	0.645	NA	1.666572
1485	6	70965125	70965125	A	C	intronic	COL9A1	NA	NA	NA	intronic	ENSG00000112280	NA	NA	NA	NA	NA	6q13	NA	NA	NA	NA	rs633762	0.87	0.87	0.878	0.8752	0.7515	0.9395	0.8746	0.9939	0.7761	0.75	0.93	0.85	0.99	0.8084	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.588542	NA	NA	0.774302	0.960054	NA	0.92	NA	1.665798
1486	7	120450658	120450658	G	A	intronic	TSPAN12	NA	NA	NA	intronic	ENSG00000106025	NA	NA	NA	NA	NA	7q31.31	NA	NA	NA	NA	rs7805733	0.82	0.82	0.825	0.842252	0.7624	0.9603	0.8415	0.7579	0.9172	0.75	0.97	0.83	0.76	0.8	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.370568	NA	NA	0.772791	0.760781	NA	0.819	NA	1.664809
1486	2	234449462	234449462	T	C	intronic	USP40	NA	NA	NA	intronic	ENSG00000085982	NA	NA	NA	NA	NA	2q37.1	NA	NA	NA	NA	rs1545525	0.77	0.77	0.77	0.763379	0.7535	0.8542	0.8487	0.5696	0.8814	0.77	0.88	0.85	0.59	0.7949	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.708001	NA	NA	0.786952	0.635593	NA	0.797	NA	1.664648
1486	21	47786494	47786494	C	T	intronic	PCNT	NA	NA	NA	intronic	ENSG00000160299	NA	NA	NA	NA	NA	21q22.3	NA	NA	NA	NA	rs2839226	0.69	0.69	0.687	0.657748	0.7833	0.7976	0.7233	0.3933	0.6953	0.77	0.79	0.76	0.4	0.7487	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.03571	NA	NA	0.805157	0.461203	NA	0.652	NA	1.662843
1486	20	42205061	42205061	G	A	intronic	SGK2	NA	NA	NA	intronic	ENSG00000101049	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs763227	0.73	0.73	0.708	0.724241	0.7982	0.7927	0.781	0.5454	0.7791	0.79	0.77	0.79	0.53	0.7604	0.79	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.085344	NA	NA	0.779419	0.588062	NA	0.725	NA	1.661981
1486	5	9066802	9066802	G	A	intronic	SEMA5A	NA	NA	NA	intronic	ENSG00000112902	NA	NA	NA	NA	NA	5p15.31	NA	NA	NA	NA	rs786846	0.82	0.82	0.793	0.803514	0.7694	0.9405	0.8242	0.7247	0.7894	0.77	0.94	0.82	0.73	0.7978	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.547962	NA	NA	0.771163	0.744666	NA	0.768	NA	1.661637
1486	1	161022380	161022380	G	A	intronic	ARHGAP30	NA	NA	NA	intronic	ENSG00000186517	NA	NA	NA	NA	NA	1q23.3	NA	NA	NA	NA	rs4396136	0.79	0.79	0.797	0.782947	0.7913	0.7083	0.7536	0.8941	0.7219	0.79	0.74	0.75	0.87	0.7712	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.385658	NA	NA	0.776163	0.882433	NA	0.855	NA	1.661337
1486	11	60559805	60559805	A	G	intronic	MS4A10	NA	NA	NA	intronic	ENSG00000172689	NA	NA	NA	NA	NA	11q12.2	NA	NA	NA	NA	rs931861	0.74	0.74	0.723	0.736222	0.7883	0.8929	0.7147	0.4834	0.8783	0.79	0.9	0.74	0.48	0.7678	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.434383	NA	NA	0.783787	0.522469	NA	0.638	NA	1.660113
1486	22	51064141	51064141	G	A	intronic	ARSA	NA	NA	NA	intronic	ENSG00000100299	NA	NA	NA	NA	NA	22q13.33	NA	NA	NA	NA	rs762673	0.8	0.8	0.783	0.800719	0.7734	0.9752	0.8401	0.6309	0.8507	0.77	0.97	0.8	0.67	0.7984	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.241355	NA	NA	0.771173	0.657643	NA	0.638	NA	1.657027
1486	19	10741907	10741907	A	G	intronic	SLC44A2	NA	NA	NA	intronic	ENSG00000129353	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs12972963	0.76	0.76	0.753	0.786342	0.7634	0.7113	0.8415	0.8578	0.7515	0.77	0.65	0.81	0.86	0.7938	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.18364	NA	NA	0.786047	0.840899	NA	0.754	NA	1.656753
1486	19	10742287	10742287	C	T	intronic	SLC44A2	NA	NA	NA	intronic	ENSG00000129353	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs1560711	0.77	0.77	0.758	0.790735	0.7634	0.7103	0.8415	0.8623	0.7689	0.77	0.66	0.81	0.86	0.7935	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.675478	NA	NA	0.786395	0.846573	NA	0.775	NA	1.656705
1486	19	10742443	10742443	C	T	intronic	SLC44A2	NA	NA	NA	intronic	ENSG00000129353	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs1560710	0.75	0.75	0.772	0.788938	0.7634	0.7113	0.8415	0.8631	0.7577	0.76	0.65	0.79	0.84	0.7942	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.171124	NA	NA	0.78593	0.847254	NA	0.754	NA	1.65647
1486	19	10742463	10742463	G	T	intronic	SLC44A2	NA	NA	NA	intronic	ENSG00000129353	NA	NA	NA	NA	NA	19p13.2	NA	NA	NA	NA	rs1560709	0.76	0.76	0.766	0.789137	0.7634	0.7113	0.8415	0.8638	0.7577	0.76	0.65	0.81	0.84	0.7941	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.148124	NA	NA	0.786163	0.847254	NA	0.768	NA	1.656337
1486	10	70143774	70143774	C	T	intronic	RUFY2	NA	NA	NA	intronic	ENSG00000204130	NA	NA	NA	NA	NA	10q21.3	NA	NA	NA	NA	rs7899885	0.71	0.71	0.712	0.663938	0.7972	0.8611	0.6744	0.388	0.6892	0.8	0.85	0.73	0.4	0.7463	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.261035	NA	NA	0.800587	0.462658	NA	0.659	NA	1.655913
1486	4	48169769	48169769	A	G	intronic	TEC	NA	NA	NA	intronic	ENSG00000135605	NA	NA	NA	NA	NA	4p12	NA	NA	NA	NA	rs7689953	0.79	0.79	0.789	0.75599	0.7734	0.9097	0.8386	0.5877	0.7485	0.78	0.93	0.8	0.63	0.7853	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.397357	NA	NA	0.785465	0.618021	NA	0.717	NA	1.655835
1486	22	42076381	42076381	C	A	intronic	NHP2L1	NA	NA	NA	intronic	ENSG00000100138	NA	NA	NA	NA	NA	22q13.2	NA	NA	NA	NA	rs5758405	0.81	0.81	0.848	0.777756	0.7903	0.9087	0.5115	0.9175	0.6299	0.8	0.91	0.53	0.91	0.7528	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.889727	NA	NA	0.801163	0.902406	NA	0.804	NA	1.655737
1486	5	137295823	137295823	T	C	intronic	FAM13B	NA	NA	NA	intronic	ENSG00000031003	NA	NA	NA	NA	NA	5q31.2	NA	NA	NA	NA	rs9327802	0.78	0.78	0.786	0.789736	0.7634	0.9712	0.7767	0.5938	0.9039	0.77	0.97	0.73	0.61	0.7988	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.338435	1.338435	NA	0.782375	0.628024	NA	0.717	NA	1.655425
1486	17	4886037	4886037	A	G	intronic	CAMTA2	NA	NA	NA	intronic	ENSG00000108509	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs238232	0.75	0.75	0.734	0.719249	0.7863	0.499	0.8516	0.9486	0.4734	0.79	0.49	0.83	0.93	0.753	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.856542	1.856542	NA	0.805349	0.934862	NA	0.826	NA	1.655351
1486	10	8111409	8111409	C	T	intronic	GATA3	NA	NA	NA	intronic	ENSG00000107485	NA	NA	NA	NA	NA	10p14	NA	NA	NA	NA	rs422628	0.83	0.83	0.799	0.826877	0.7793	0.9544	0.8689	0.736	0.8374	0.76	0.95	0.83	0.78	0.8025	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.169399	NA	NA	0.762907	0.735134	NA	0.71	NA	1.655293
1487	10	13206233	13206233	A	T	intronic	MCM10	NA	NA	NA	intronic	ENSG00000065328	NA	NA	NA	NA	NA	10p13	NA	NA	NA	NA	rs7090944	0.8	0.8	0.786	0.796925	0.7753	0.869	0.8689	0.7035	0.82	0.77	0.86	0.83	0.73	0.7979	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.903071	2.903071	NA	0.772093	0.70177	NA	0.754	NA	1.654707
1487	8	61655690	61655690	G	A	intronic	CHD7	NA	NA	NA	intronic	ENSG00000171316	NA	NA	NA	NA	NA	8q12.2	NA	NA	NA	NA	rs7836586	0.8	0.8	0.775	0.827077	0.7654	0.9395	0.8228	0.7148	0.9294	0.77	0.92	0.78	0.7	0.8119	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.030446	NA	NA	0.768059	0.750757	NA	0.812	NA	1.654641
1487	9	130241822	130241822	T	C	intronic	LRSAM1	NA	NA	NA	intronic	ENSG00000148356	NA	NA	NA	NA	NA	9q33.3	NA	NA	NA	NA	rs1539569	0.73	0.73	0.719	0.727835	0.7972	0.6935	0.8098	0.6278	0.7689	0.81	0.69	0.76	0.63	0.7783	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.501149	NA	NA	0.770349	0.685967	NA	0.739	NA	1.654151
1487	21	34894623	34894623	T	C	intronic	GART	NA	NA	NA	intronic	ENSG00000159131	NA	NA	NA	NA	NA	21q22.11	NA	NA	NA	NA	rs2834234	0.87	0.87	0.847	0.874002	0.7753	0.9831	0.8689	0.9183	0.8067	0.77	0.99	0.87	0.9	0.8103	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.660773	NA	NA	0.760698	0.90286	NA	0.877	NA	1.653702
1487	15	41146581	41146581	T	C	intronic	SPINT1	NA	NA	NA	intronic	ENSG00000166145	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs3736287	0.74	0.74	0.715	0.739217	0.7863	0.7143	0.8184	0.6573	0.771	0.79	0.7	0.83	0.65	0.7849	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.869174	NA	NA	0.77814	0.688153	NA	0.746	NA	1.65066
1487	17	4882952	4882952	G	A	intronic	CAMTA2	NA	NA	NA	intronic	ENSG00000108509	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs1859434	0.75	0.75	0.746	0.71845	0.7843	0.498	0.8487	0.9486	0.4744	0.79	0.49	0.83	0.93	0.7613	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.008081	NA	NA	0.805	0.934862	NA	0.826	NA	1.6494
1487	10	16878204	16878204	T	C	intronic	CUBN	NA	NA	NA	intronic	ENSG00000107611	NA	NA	NA	NA	NA	10p13	NA	NA	NA	NA	rs703062	0.7	0.7	0.688	0.663538	0.8062	0.4871	0.7594	0.6611	0.6339	0.83	0.53	0.74	0.66	0.739	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.950882	NA	NA	0.805814	0.682025	ID=COSN163571;OCCURENCE=1(breast)	0.638	NA	1.648986
1487	8	133961237	133961237	G	C	intronic	TG	NA	NA	NA	intronic	ENSG00000042832	NA	NA	NA	NA	NA	8q24.22	NA	NA	NA	NA	rs2246611	0.79	0.79	0.778	0.810503	0.7624	0.8224	0.8804	0.7905	0.8252	0.76	0.82	0.86	0.74	0.807	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.555065	NA	NA	0.784302	0.801861	NA	0.826	NA	1.646298
1487	8	113842039	113842039	G	A	intronic	CSMD3	NA	NA	NA	intronic	ENSG00000164796	NA	NA	NA	NA	NA	8q23.3	NA	NA	NA	NA	rs10106945	0.85	0.85	0.857	0.869808	0.7724	0.9147	0.8429	0.9289	0.863	0.78	0.91	0.8	0.91	0.815	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.481945	NA	NA	0.766512	0.906718	NA	0.775	NA	1.646088
1488	8	133960991	133960991	C	T	intronic	TG	NA	NA	NA	intronic	ENSG00000042832	NA	NA	NA	NA	NA	8q24.22	NA	NA	NA	NA	rs2246624	0.79	0.79	0.77	0.810703	0.7634	0.8224	0.8804	0.7905	0.8252	0.76	0.82	0.86	0.74	0.8067	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.095424	NA	NA	0.785233	0.802088	NA	0.826	NA	1.644667
1488	2	26671544	26671544	A	G	intronic	DRC1	NA	NA	NA	intronic	ENSG00000157856	NA	NA	NA	NA	NA	2p23.3	NA	NA	NA	NA	rs4072407	0.53	0.53	0.469	0.530351	0.8151	0.2798	0.598	0.3109	0.7444	0.83	0.24	0.65	0.33	0.7157	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.500488	NA	NA	0.825814	0.390831	NA	0.514	NA	1.643386
1488	8	54745538	54745538	C	G	intronic	ATP6V1H	NA	NA	NA	intronic	ENSG00000047249	NA	NA	NA	NA	NA	8q11.23	NA	NA	NA	NA	rs6991513	0.86	0.86	0.867	0.858027	0.7734	0.8671	0.8458	0.9856	0.772	0.78	0.88	0.83	0.98	0.8065	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.898651	NA	NA	0.777093	0.955515	NA	0.841	NA	1.643007
1488	5	137323117	137323117	A	G	intronic	FAM13B	NA	NA	NA	intronic	ENSG00000031003	NA	NA	NA	NA	NA	5q31.2	NA	NA	NA	NA	rs7714536	0.78	0.78	0.777	0.789736	0.7634	0.9712	0.7767	0.5938	0.9039	0.77	0.97	0.73	0.61	0.8148	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.737415	NA	NA	0.783085	0.628065	NA	0.696	NA	1.638715
1488	8	139158317	139158317	T	C	intronic	FAM135B	NA	NA	NA	intronic	ENSG00000147724	NA	NA	NA	NA	NA	8q24.23	NA	NA	NA	NA	rs7006664	0.88	0.88	0.875	0.895567	0.7823	0.997	0.8703	0.8797	0.9468	0.78	0.99	0.86	0.9	0.8196	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.13627	3.13627	NA	0.759651	0.867907	NA	0.913	NA	1.638449
1488	8	139149510	139149510	A	C	intronic	FAM135B	NA	NA	NA	intronic	ENSG00000147724	NA	NA	NA	NA	NA	8q24.23	NA	NA	NA	NA	rs6577877	0.87	0.87	0.875	0.892772	0.7833	0.997	0.8674	0.8744	0.9407	0.78	0.99	0.86	0.89	0.8184	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.714349	NA	NA	0.760386	0.87038	NA	0.906	NA	1.637914
1489	3	46484898	46484898	T	G	intronic	LTF	NA	NA	NA	intronic	ENSG00000012223	NA	NA	NA	NA	NA	3p21.31	NA	NA	NA	NA	rs7615975	0.89	0.89	0.883	0.919928	0.7644	1	0.8674	0.9932	0.9356	0.76	1	0.85	1	0.8359	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.530482	NA	NA	0.765014	0.952111	NA	0.913	NA	1.634686
1489	3	164733721	164733721	G	A	intronic	SI	NA	NA	NA	intronic	ENSG00000090402	NA	NA	NA	NA	NA	3q26.1	NA	NA	NA	NA	rs2290738	0.75	0.75	0.717	0.69349	0.8131	0.8621	0.7478	0.5061	0.6115	0.83	0.87	0.73	0.49	0.7572	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.213089	NA	NA	0.795116	0.553109	NA	0.746	NA	1.634584
1489	16	23486197	23486197	A	G	intronic	GGA2	NA	NA	NA	intronic	ENSG00000103365	NA	NA	NA	NA	NA	16p12.2	NA	NA	NA	NA	rs11074559	0.69	0.69	0.67	0.66254	0.8111	0.6994	0.719	0.472	0.6892	0.81	0.68	0.75	0.5	0.7505	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.186277	NA	NA	0.805349	0.540301	NA	0.638	NA	1.633051
1489	4	48147612	48147612	T	G	intronic	TEC	NA	NA	NA	intronic	ENSG00000135605	NA	NA	NA	NA	NA	4p12	NA	NA	NA	NA	rs2661547	0.84	0.84	0.847	0.824481	0.7734	0.9107	0.866	0.8321	0.7485	0.78	0.93	0.84	0.83	0.8062	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.14758	NA	NA	0.787907	0.843395	NA	0.79	NA	1.632493
1489	4	48170669	48170669	A	G	intronic	TEC	NA	NA	NA	intronic	ENSG00000135605	NA	NA	NA	NA	NA	4p12	NA	NA	NA	NA	rs2243840	0.84	0.84	0.85	0.824281	0.7744	0.9097	0.8646	0.8321	0.7485	0.78	0.93	0.83	0.84	0.8061	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.464196	NA	NA	0.787558	0.846346	NA	0.79	NA	1.631942
1489	6	160225559	160225559	G	C	intronic	PNLDC1	NA	NA	NA	intronic	ENSG00000146453	NA	NA	NA	NA	NA	6q25.3	NA	NA	NA	NA	rs9364536	0.74	0.74	0.709	0.763978	0.7952	0.5893	0.8761	0.7496	0.8517	0.8	0.57	0.87	0.74	0.7944	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.015485	NA	NA	0.781977	0.729914	NA	0.645	NA	1.628423
1489	20	50290654	50290654	T	C	intronic	ATP9A	NA	NA	NA	intronic	ENSG00000054793	NA	NA	NA	NA	NA	20q13.2	NA	NA	NA	NA	rs6091346	0.72	0.72	0.69	0.713458	0.7942	0.7986	0.7752	0.5068	0.7781	0.78	0.81	0.77	0.5	0.7734	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.116282	NA	NA	0.804535	0.591693	NA	0.746	NA	1.627865
1490	22	24472270	24472270	A	G	intronic	CABIN1	NA	NA	NA	intronic	ENSG00000099991	NA	NA	NA	NA	NA	22q11.23	NA	NA	NA	NA	rs2283807	0.66	0.66	0.611	0.65655	0.7843	0.6052	0.7954	0.4644	0.7393	0.8	0.56	0.82	0.47	0.7707	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.674122	NA	NA	0.82093	0.495234	ID=COSN166722;OCCURENCE=1(haematopoietic_and_lymphoid_tissue)	0.551	NA	1.62407
1490	8	61707725	61707725	G	A	intronic	CHD7	NA	NA	NA	intronic	ENSG00000171316	NA	NA	NA	NA	NA	8q12.2	NA	NA	NA	NA	rs4540437	0.86	0.86	0.863	0.896965	0.7714	0.9444	0.8429	0.9576	0.9335	0.77	0.92	0.81	0.95	0.8316	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.199184	NA	NA	0.77552	0.925589	NA	0.899	NA	1.62148
1490	11	403939	403939	A	G	intronic	PKP3	NA	NA	NA	intronic	ENSG00000184363	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs7479832	0.9	0.9	0.9	0.926917	0.7783	0.998	0.8991	0.9826	0.9509	0.78	1	0.88	0.98	0.8396	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.316801	NA	NA	0.761688	0.946033	NA	0.862	NA	1.620412
1490	16	23541223	23541223	G	A	intronic	EARS2	NA	NA	NA	intronic	ENSG00000103356	NA	NA	NA	NA	NA	16p12.2	NA	NA	NA	NA	rs2072061	0.69	0.69	0.7	0.673123	0.8131	0.6974	0.7233	0.5106	0.6881	0.78	0.67	0.75	0.52	0.7557	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.502431	NA	NA	0.812425	0.577178	NA	0.717	NA	1.618775
1490	4	79845007	79845007	C	A	intronic	PAQR3	NA	NA	NA	intronic	ENSG00000163291	NA	NA	NA	NA	NA	4q21.21	NA	NA	NA	NA	rs13108247	0.74	0.74	0.732	0.712061	0.826	0.6597	0.7032	0.7337	0.6258	0.82	0.67	0.73	0.72	0.7491	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.102632	NA	NA	0.808256	0.723332	NA	0.71	NA	1.616644
1491	16	1817768	1817768	T	G	intronic	MAPK8IP3	NA	NA	NA	intronic	ENSG00000138834	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs2076428	0.76	0.76	0.746	0.767971	0.7913	0.6448	0.8746	0.8555	0.6769	0.79	0.62	0.85	0.81	0.7894	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.888232	NA	NA	0.806455	0.852732	NA	0.833	NA	1.612845
1491	13	48563008	48563008	G	A	intronic	SUCLA2	NA	NA	NA	intronic	ENSG00000136143	NA	NA	NA	NA	NA	13q14.2	NA	NA	NA	NA	rs6561424	0.72	0.72	0.728	0.683506	0.8181	0.8006	0.6571	0.553	0.6196	0.8	0.75	0.72	0.55	0.7515	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.388347	NA	NA	0.818023	0.593509	NA	0.797	NA	1.612377
1491	16	1817754	1817754	A	G	intronic	MAPK8IP3	NA	NA	NA	intronic	ENSG00000138834	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs2076427	0.76	0.76	0.751	0.76857	0.7913	0.6488	0.8746	0.8555	0.6759	0.79	0.63	0.85	0.81	0.7897	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.056994	NA	NA	0.808357	0.850941	NA	0.855	NA	1.610643
1491	16	1817935	1817935	A	C	intronic	MAPK8IP3	NA	NA	NA	intronic	ENSG00000138834	NA	NA	NA	NA	NA	16p13.3	NA	NA	NA	NA	rs2076429	0.76	0.76	0.754	0.770767	0.7913	0.6558	0.8746	0.8555	0.68	0.79	0.63	0.85	0.81	0.7899	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.573045	NA	NA	0.808897	0.850525	NA	0.841	NA	1.609903
1491	5	135188214	135188214	G	C	intronic	SLC25A48	NA	NA	NA	intronic	ENSG00000145832	NA	NA	NA	NA	NA	5q31.1	NA	NA	NA	NA	rs2304078	0.74	0.74	0.757	0.742812	0.8211	0.7123	0.67	0.7269	0.7669	0.82	0.66	0.7	0.77	0.7646	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.752128	NA	NA	0.805083	0.751503	NA	0.746	NA	1.609217
1491	10	99682981	99682981	T	C	intronic	CRTAC1	NA	NA	NA	intronic	ENSG00000095713	NA	NA	NA	NA	NA	10q24.2	NA	NA	NA	NA	rs894375	0.82	0.82	0.826	0.798522	0.7942	0.9226	0.8761	0.7504	0.6851	0.81	0.92	0.87	0.72	0.8032	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.720652	NA	NA	0.79344	0.751702	NA	0.841	NA	1.60916
1491	19	1031212	1031212	A	G	intronic	CNN2	NA	NA	NA	intronic	ENSG00000064666	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs7247087	0.81	0.81	0.79	0.812899	0.7903	0.8938	0.7622	0.7481	0.8763	0.8	0.9	0.81	0.73	0.8042	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.682003	NA	NA	0.796348	0.733772	NA	0.79	NA	1.609152
1491	3	64526942	64526942	A	C	intronic	ADAMTS9	NA	NA	NA	intronic	ENSG00000163638	NA	NA	NA	NA	NA	3p14.1	NA	NA	NA	NA	rs3796383	0.55	0.55	0.511	0.533147	0.833	0.4147	0.4769	0.2489	0.771	0.83	0.4	0.58	0.25	0.7075	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.573904	NA	NA	0.850349	0.307081	NA	0.543	NA	1.609151
1491	10	119014948	119014948	C	A	intronic	SLC18A2	NA	NA	NA	intronic	ENSG00000165646	NA	NA	NA	NA	NA	10q25.3	NA	NA	NA	NA	rs363343	0.65	0.65	0.623	0.637979	0.8241	0.4236	0.7378	0.6309	0.6063	0.81	0.42	0.74	0.59	0.7412	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.714846	NA	NA	0.825698	0.646618	NA	0.696	NA	1.609002
1491	10	6005674	6005674	G	A	intronic	IL15RA	NA	NA	NA	intronic	ENSG00000134470	NA	NA	NA	NA	NA	10p15.1	NA	NA	NA	NA	rs3136614	0.86	0.86	0.86	0.878994	0.7773	0.9563	0.8775	0.8797	0.9039	0.81	0.95	0.85	0.84	0.839	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.110667	NA	NA	0.777326	0.884249	NA	0.87	NA	1.606374
1491	4	2928413	2928413	T	C	intronic	ADD1	NA	NA	NA	intronic	ENSG00000087274	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs4964	0.73	0.73	0.725	0.766973	0.7952	0.5724	0.8242	0.8351	0.8057	0.78	0.53	0.81	0.84	0.7902	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.824819	NA	NA	0.808544	0.835202	NA	0.681	NA	1.606056
1491	3	64527336	64527336	C	T	intronic	ADAMTS9	NA	NA	NA	intronic	ENSG00000163638	NA	NA	NA	NA	NA	3p14.1	NA	NA	NA	NA	rs1036919	0.54	0.54	0.511	0.53115	0.833	0.4147	0.4741	0.2421	0.772	0.83	0.4	0.57	0.23	0.7086	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.077417	NA	NA	0.852558	0.309124	NA	0.543	NA	1.605842
1491	3	64527321	64527321	T	C	intronic	ADAMTS9	NA	NA	NA	intronic	ENSG00000163638	NA	NA	NA	NA	NA	3p14.1	NA	NA	NA	NA	rs1373163	0.55	0.55	0.512	0.533147	0.833	0.4147	0.4741	0.2496	0.772	0.83	0.4	0.57	0.25	0.7092	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.10029	NA	NA	0.852408	0.312982	NA	0.543	NA	1.605392
1492	1	22157689	22157689	G	A	intronic	HSPG2	NA	NA	NA	intronic	ENSG00000142798	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs3736355	0.76	0.76	0.753	0.759185	0.8042	0.8046	0.7277	0.6528	0.8323	0.79	0.81	0.72	0.68	0.7923	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.448574	NA	NA	0.802163	0.706764	NA	0.667	NA	1.601337
1492	22	32002294	32002294	T	C	intronic	SFI1	NA	NA	NA	intronic	ENSG00000198089	NA	NA	NA	NA	NA	22q12.2	NA	NA	NA	NA	rs5753723	0.88	0.88	0.886	0.884984	0.7903	0.9246	0.7954	0.9917	0.8609	0.79	0.93	0.82	0.99	0.8204	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.256244	NA	NA	0.788859	0.95827	NA	0.87	NA	1.600441
1492	18	72226539	72226539	T	C	intronic	CNDP1	NA	NA	NA	intronic	ENSG00000150656	NA	NA	NA	NA	NA	18q22.3	NA	NA	NA	NA	rs12607796	0.79	0.79	0.79	0.757188	0.7992	0.9335	0.8573	0.5446	0.7485	0.8	0.92	0.83	0.59	0.7963	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.136756	NA	NA	0.804535	0.582388	NA	0.717	NA	1.599965
1492	9	94456705	94456705	T	A	intergenic	MIR3910-1,ROR2	dist=58062;dist=28173	NA	NA	intronic	ENSG00000169071	NA	NA	NA	NA	NA	9q22.31	NA	NA	NA	NA	rs923770	0.7	0.7	0.695	0.696486	0.7078	0.7788	0.7738	0.6762	0.5726	0.7	0.77	0.71	0.63	0.6639	0.77	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.138023	NA	NA	0.695462	0.677267	NA	0.667	NA	1.5995047
1492	4	2934308	2934308	G	A	intronic	MFSD10	NA	NA	NA	intronic	ENSG00000109736	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs1263349	0.71	0.71	0.722	0.743211	0.8032	0.5427	0.8084	0.7708	0.8047	0.79	0.48	0.8	0.77	0.7862	0.81	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.819478	NA	NA	0.811279	0.768724	NA	0.638	NA	1.599321
1492	19	57834963	57834963	C	T	intronic	ZNF543	NA	NA	NA	intronic	ENSG00000178229	NA	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs4801466	0.8	0.8	0.796	0.807708	0.7843	0.6627	0.7709	0.9826	0.771	0.79	0.68	0.77	0.98	0.8009	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.034594	NA	NA	0.815922	0.954909	NA	0.812	NA	1.598878
1492	2	223787559	223787559	G	A	intronic	ACSL3	NA	NA	NA	intronic	ENSG00000123983	NA	NA	NA	NA	NA	2q36.1	NA	NA	NA	NA	rs11891410	0.88	0.88	0.887	0.904353	0.7893	0.9732	0.8876	0.9342	0.9233	0.79	0.97	0.87	0.93	0.8366	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.496128	NA	NA	0.776512	0.923513	NA	0.899	NA	1.597588
1492	12	48537624	48537624	A	G	intronic	PFKM	NA	NA	NA	intronic	ENSG00000152556	NA	NA	NA	NA	NA	12q13.11	NA	NA	NA	NA	rs4075913	0.65	0.65	0.677	0.645367	0.839	0.3542	0.5504	0.7678	0.6483	0.84	0.4	0.56	0.73	0.7352	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.447361	NA	NA	0.83	0.772356	NA	0.79	NA	1.5958
1493	17	56581651	56581651	C	G	intronic	MTMR4	NA	NA	NA	intronic	ENSG00000108389	NA	NA	NA	NA	NA	17q22	NA	NA	NA	NA	rs4277402	0.89	0.89	0.898	0.910942	0.7734	1	0.8833	0.9599	0.9141	0.79	1	0.85	0.95	0.8461	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.663435	NA	NA	0.78686	0.939174	NA	0.775	NA	1.59364
1493	3	16646745	16646745	C	G	UTR5	DAZL	NM_001351:c.-33G>C	NA	NA	UTR5	ENSG00000092345	ENST00000399444:c.-33G>C	NA	NA	NA	NA	3p24.3	NA	NA	NA	NA	rs9847342	0.95	0.95	0.935	0.967652	0.8926	0.998	0.9582	0.9962	0.9816	0.89	0.99	0.95	1	0.9355	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.047984	NA	NA	0.911895	0.978261	NA	0.486	NA	1.5933384
1493	8	144641753	144641753	A	C	intronic	GSDMD	NA	NA	NA	intronic	ENSG00000104518	NA	NA	NA	NA	NA	8q24.3	NA	NA	NA	NA	rs4874151	0.78	0.78	0.76	0.771366	0.8062	0.9206	0.7176	0.6498	0.7843	0.79	0.91	0.73	0.65	0.7871	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.22053	NA	NA	0.814698	0.64766	NA	0.681	NA	1.592002
1493	2	168986154	168986154	A	G	intronic	STK39	NA	NA	NA	intronic	ENSG00000198648	NA	NA	NA	NA	NA	2q24.3	NA	NA	NA	NA	rs925846	0.81	0.81	0.804	0.802915	0.7932	0.7698	0.8516	0.8253	0.7822	0.81	0.82	0.81	0.83	0.8147	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.234829	1.234829	NA	0.801901	0.81931	NA	0.819	NA	1.590199
1493	17	40024023	40024023	A	T	UTR3	ACLY	NM_001096:c.*40T>A,NM_198830:c.*40T>A	NA	NA	UTR3	ENSG00000131473	ENST00000352035:c.*40T>A,ENST00000590151:c.*40T>A,ENST00000353196:c.*40T>A,ENST00000537919:c.*40T>A,ENST00000393896:c.*40T>A	NA	NA	NA	NA	17q21.2	NA	NA	NA	NA	rs7217218	0.91	0.91	0.907	0.923522	0.8986	1	0.9366	0.8389	0.9755	0.89	1	0.91	0.83	0.9278	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.035277	NA	NA	0.918953	0.857921	NA	0.957	NA	1.5879804
1493	8	124663769	124663769	A	T	intronic	KLHL38	NA	NA	NA	ncRNA_intronic	ENSG00000253286	NA	NA	NA	NA	NA	8q24.13	NA	NA	NA	NA	rs10109736	0.9	0.9	0.916	0.909545	0.9264	0.9315	0.8429	0.8949	0.9366	0.93	0.92	0.85	0.87	0.9039	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.24981	NA	NA	0.915081	0.90447	NA	0.928	NA	1.5879523
1493	17	73242895	73242895	A	G	intronic	GGA3	NA	NA	NA	intronic	ENSG00000125447	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs2242230	0.73	0.73	0.709	0.709864	0.7982	0.8304	0.7954	0.4115	0.8374	0.81	0.89	0.78	0.39	0.8033	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.2181	NA	NA	0.811512	0.498411	NA	0.739	NA	1.586988
1493	10	94545	94545	C	T	intronic	TUBB8	NA	NA	NA	intronic	ENSG00000173876	NA	NA	NA	NA	NA	10p15.3	NA	NA	NA	NA	rs10904047	0.65	0.65	0.61	0.671526	0.838	0.4593	0.6945	0.7254	0.6299	0.78	0.41	0.67	0.71	0.7447	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.53225	NA	NA	0.83112	0.734318	NA	0.014	NA	1.58618
1493	9	14851617	14851617	T	C	intronic	FREM1	NA	NA	NA	intronic	ENSG00000164946	NA	NA	NA	NA	NA	9p22.3	NA	NA	NA	NA	rs2818940	0.78	0.78	0.767	0.769569	0.8111	0.9573	0.7983	0.4939	0.8855	0.82	0.95	0.78	0.53	0.8054	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.024989	NA	NA	0.797353	0.574801	NA	0.819	NA	1.586147
1493	22	37163329	37163329	C	T	intronic	IFT27	NA	NA	NA	intronic	ENSG00000100360	NA	NA	NA	NA	NA	22q12.3	NA	NA	NA	NA	rs1048012	0.8	0.8	0.815	0.752596	0.827	0.9127	0.683	0.6384	0.7147	0.82	0.93	0.71	0.68	0.7788	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.512292	NA	NA	0.808953	0.666818	NA	0.826	NA	1.585247
1494	19	56691912	56691912	G	C	intronic	GALP	NA	NA	NA	intronic	ENSG00000197487	NA	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs274171	0.85	0.85	0.836	0.846845	0.8012	0.9256	0.8631	0.8366	0.8149	0.79	0.92	0.84	0.85	0.827	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.139724	NA	NA	0.789186	0.838175	NA	0.884	NA	1.582614
1494	1	22183471	22183471	A	C	intronic	HSPG2	NA	NA	NA	intronic	ENSG00000142798	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs12024579	0.75	0.75	0.776	0.749002	0.8151	0.8095	0.6772	0.6309	0.8292	0.8	0.82	0.69	0.65	0.791	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.374819	NA	NA	0.81314	0.670676	NA	0.688	NA	1.58076
1494	15	28231793	28231793	T	C	intronic	OCA2	NA	NA	NA	intronic	ENSG00000104044	NA	NA	NA	NA	NA	15q13.1	NA	NA	NA	NA	rs10852218	0.76	0.76	0.724	0.693291	0.8211	0.999	0.7305	0.4168	0.5941	0.82	1	0.74	0.42	0.7793	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.504935	1.504935	NA	0.818953	0.49478	NA	0.703	NA	1.580647
1494	3	41957466	41957466	T	G	intronic	ULK4	NA	NA	NA	intronic	ENSG00000168038	NA	NA	NA	NA	NA	3p22.1	NA	NA	NA	NA	rs1716698	0.7	0.7	0.666	0.68131	0.8091	0.8512	0.8098	0.2806	0.8252	0.8	0.84	0.8	0.28	0.7865	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.19649	NA	NA	0.824231	0.339087	NA	0.652	NA	1.580169
1494	7	825114	825114	T	C	intronic	HEATR2	NA	NA	NA	intronic	ENSG00000164818	NA	NA	NA	NA	NA	7p22.3	NA	NA	NA	NA	rs67721251	0.72	0.72	0.734	0.741014	0.8191	0.619	0.6816	0.7171	0.8609	0.81	0.63	0.67	0.74	0.7795	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.338586	NA	NA	0.822326	0.709714	NA	0.681	NA	1.579074
1494	14	106090927	106090927	G	T	intergenic	TMEM121,ELK2AP	dist=94388;dist=44987	NA	NA	exonic	ENSG00000211892	NA	synonymous SNV	ENSG00000211892:ENST00000390543:exon4:c.C870A:p.L290L	NA	NA	14q32.33	NA	NA	NA	NA	rs8010914	0.88	0.88	0.85	0.868011	0.9831	0.998	0.9597	0.5371	0.998	0.99	0.97	0.95	0.54	0.9532	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.361441	NA	NA	0.987943	0.671008	NA	0.167	NA	1.575757
1495	15	42139038	42139038	G	A	intronic	JMJD7-PLA2G4B,PLA2G4B	NA	NA	NA	intronic	ENSG00000168970,ENSG00000243708	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs890508	0.76	0.76	0.737	0.750599	0.8171	0.876	0.8213	0.5613	0.7587	0.82	0.87	0.81	0.51	0.7965	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.062536	NA	NA	0.811512	0.608034	NA	0.638	NA	1.574888
1495	4	47951945	47951945	G	A	intronic	CNGA1	NA	NA	NA	intronic	ENSG00000198515	NA	NA	NA	NA	NA	4p12	NA	NA	NA	NA	rs1972883	0.89	0.89	0.885	0.880391	0.7913	0.9831	0.8732	0.9289	0.8057	0.81	0.99	0.86	0.92	0.8372	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.143748	NA	NA	0.796936	0.92195	NA	0.92	NA	1.574564
1495	11	1216440	1216440	G	C	intergenic	MUC2,MUC5B	dist=112023;dist=27855	NA	NA	intergenic	ENSG00000215182,ENSG00000117983	dist=54079;dist=27856	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs28415193	0.56	0.56	0.504	0.51278	0.5885	0.6687	0.5562	0.2995	0.5317	0.6	0.72	0.58	0.29	0.5848	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.133714	NA	NA	0.586224	0.330645	NA	0.471	NA	1.5738094
1495	15	42134371	42134371	G	C	intronic	JMJD7-PLA2G4B,PLA2G4B	NA	NA	NA	intronic	ENSG00000168970,ENSG00000243708	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs1648834	0.77	0.77	0.726	0.755591	0.8171	0.88	0.8228	0.5749	0.7607	0.82	0.87	0.81	0.53	0.797	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.475994	NA	NA	0.812093	0.620744	NA	0.667	NA	1.573807
1495	10	116100320	116100320	T	G	intronic	AFAP1L2	NA	NA	NA	intronic	ENSG00000169129	NA	NA	NA	NA	NA	10q25.3	NA	NA	NA	NA	rs4752395	0.74	0.74	0.696	0.694489	0.8181	0.9454	0.781	0.3411	0.7249	0.82	0.94	0.81	0.35	0.7863	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.887991	NA	NA	0.821977	0.423059	NA	0.71	NA	1.573623
1495	18	59174817	59174817	C	A	intronic	CDH20	NA	NA	NA	intronic	ENSG00000101542	NA	NA	NA	NA	NA	18q21.33	NA	NA	NA	NA	rs1547956	0.76	0.76	0.752	0.71865	0.8429	0.751	0.7046	0.5582	0.7843	0.83	0.77	0.77	0.63	0.7786	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.197074	NA	NA	0.805465	0.585565	NA	0.645	NA	1.573035
1495	11	61624885	61624885	G	C	intronic	FADS2	NA	NA	NA	intronic	ENSG00000134824	NA	NA	NA	NA	NA	11q12.2	NA	NA	NA	NA	rs526126	0.7	0.7	0.645	0.680112	0.8111	0.8244	0.8386	0.2375	0.8824	0.81	0.87	0.8	0.25	0.8	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.090177	NA	NA	0.816004	0.340599	NA	0.674	NA	1.572896
1495	11	6243843	6243843	C	G	intronic	FAM160A2	NA	NA	NA	intronic	ENSG00000051009	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs3750946	0.78	0.78	0.766	0.760184	0.8161	0.9593	0.8228	0.4682	0.8476	0.81	0.96	0.85	0.49	0.8028	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.671206	NA	NA	0.80831	0.529305	NA	0.797	NA	1.57279
1495	4	47953515	47953515	A	T	intronic	CNGA1	NA	NA	NA	intronic	ENSG00000198515	NA	NA	NA	NA	NA	4p12	NA	NA	NA	NA	rs3845160	0.89	0.89	0.879	0.88099	0.7913	0.9831	0.8746	0.9304	0.8057	0.81	0.99	0.86	0.92	0.8372	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.834206	NA	NA	0.798938	0.924165	NA	0.92	NA	1.572562
1495	10	105797378	105797378	G	A	intronic	COL17A1	NA	NA	NA	intronic	ENSG00000065618	NA	NA	NA	NA	NA	10q24.33	NA	NA	NA	NA	rs2282437	0.72	0.72	0.694	0.682907	0.8171	0.8194	0.768	0.4153	0.7055	0.81	0.84	0.78	0.4	0.7781	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.064767	NA	NA	0.833023	0.488652	NA	0.746	NA	1.571777
1495	11	1221817	1221817	G	C	intergenic	MUC2,MUC5B	dist=117400;dist=22478	NA	NA	intergenic	ENSG00000215182,ENSG00000117983	dist=59456;dist=22479	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs1132440	0.55	0.55	0.573	0.491414	0.5924	0.6498	0.5533	0.2927	0.4489	0.59	0.72	0.58	0.28	0.5793	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.341228	NA	NA	0.590634	0.336605	NA	0.464	NA	1.5709994
1495	13	25466774	25466774	T	C	intronic	CENPJ	NA	NA	NA	intronic	ENSG00000151849	NA	NA	NA	NA	NA	13q12.12	NA	NA	NA	NA	rs9318917	0.77	0.77	0.729	0.73722	0.7972	0.8601	0.8415	0.6021	0.6575	0.81	0.87	0.81	0.57	0.8036	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.088246	NA	NA	0.830814	0.64503	NA	0.739	NA	1.568386
1495	1	9658707	9658707	G	A	intronic	TMEM201	NA	NA	NA	intronic	ENSG00000188807	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs9430182	0.75	0.75	0.751	0.746406	0.8121	0.6964	0.7767	0.6846	0.7924	0.8	0.71	0.78	0.71	0.7963	0.82	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.753896	NA	NA	0.823927	0.719973	NA	0.572	NA	1.567673
1495	13	25458650	25458650	G	A	intronic	CENPJ	NA	NA	NA	intronic	ENSG00000151849	NA	NA	NA	NA	NA	13q12.12	NA	NA	NA	NA	rs1530876	0.78	0.78	0.751	0.748203	0.7962	0.8601	0.8458	0.6422	0.6575	0.81	0.87	0.81	0.62	0.8066	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.159574	NA	NA	0.831744	0.685202	NA	0.768	NA	1.565456
1495	20	50244098	50244098	T	C	intronic	ATP9A	NA	NA	NA	intronic	ENSG00000054793	NA	NA	NA	NA	NA	20q13.2	NA	NA	NA	NA	rs2426317	0.73	0.73	0.693	0.707867	0.8231	0.8006	0.7277	0.472	0.7986	0.82	0.79	0.76	0.5	0.7829	0.83	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.220017	NA	NA	0.828953	0.571493	NA	0.717	NA	1.565047
1496	15	42137282	42137282	G	A	intronic	JMJD7-PLA2G4B,PLA2G4B	NA	NA	NA	intronic	ENSG00000168970,ENSG00000243708	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs1648829	0.76	0.76	0.724	0.752995	0.8171	0.877	0.8228	0.5681	0.7597	0.82	0.87	0.81	0.52	0.804	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.133402	NA	NA	0.81397	0.623524	NA	0.659	NA	1.56493
1496	20	57565943	57565943	G	C	intronic	NELFCD	NA	NA	NA	intronic	ENSG00000101158	NA	NA	NA	NA	NA	20q13.32	NA	NA	NA	NA	rs163782	0.82	0.82	0.812	0.827077	0.826	0.8641	0.7781	0.8169	0.8384	0.82	0.88	0.8	0.79	0.8047	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.151155	NA	NA	0.807326	0.809805	NA	0.87	NA	1.561974
1496	12	48389643	48389643	A	C	intronic	COL2A1	NA	NA	NA	intronic	ENSG00000139219	NA	NA	NA	NA	NA	12q13.11	NA	NA	NA	NA	rs1034762	0.7	0.7	0.713	0.682708	0.8489	0.4821	0.5965	0.7874	0.638	0.85	0.48	0.62	0.78	0.7489	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.41463	NA	NA	0.840465	0.782569	NA	0.804	NA	1.561735
1496	11	1218143	1218143	A	C	intergenic	MUC2,MUC5B	dist=113726;dist=26152	NA	NA	intergenic	ENSG00000215182,ENSG00000117983	dist=55782;dist=26153	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs28515631	0.57	0.57	0.536	0.503794	0.5954	0.6498	0.5576	0.3343	0.4499	0.59	0.72	0.59	0.33	0.5922	0.72	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.848678	NA	NA	0.587154	0.37935	NA	0.536	NA	1.5585794
1496	8	39521419	39521419	T	C	intronic	ADAM18	NA	NA	NA	intronic	ENSG00000168619	NA	NA	NA	NA	NA	8p11.22	NA	NA	NA	NA	rs6988389	0.68	0.68	0.671	0.699081	0.8211	0.3591	0.7435	0.7511	0.8221	0.82	0.39	0.76	0.73	0.7778	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.257877	NA	NA	0.843336	0.779392	NA	0.761	NA	1.557764
1496	14	23940081	23940081	A	G	intronic	NGDN	NA	NA	NA	intronic	ENSG00000129460	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs1028587	0.71	0.71	0.702	0.70028	0.8489	0.6389	0.6916	0.6172	0.729	0.84	0.65	0.67	0.64	0.7698	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.084913	NA	NA	0.825465	0.634589	NA	0.717	NA	1.555835
1497	14	23945366	23945366	A	G	intronic	NGDN	NA	NA	NA	intronic	ENSG00000129460	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs2295706	0.71	0.71	0.723	0.700679	0.8489	0.6389	0.6916	0.6188	0.729	0.84	0.65	0.67	0.64	0.771	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.515355	NA	NA	0.825814	0.634816	NA	0.717	NA	1.554286
1497	16	16161976	16161976	G	A	intronic	ABCC1	NA	NA	NA	intronic	ENSG00000103222	NA	NA	NA	NA	NA	16p13.11	NA	NA	NA	NA	rs35604	0.82	0.82	0.821	0.782548	0.828	0.8125	0.781	0.8797	0.5746	0.82	0.77	0.76	0.9	0.7914	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.717461	NA	NA	0.826533	0.877783	NA	0.841	NA	1.554067
1497	1	9658465	9658465	T	G	intronic	TMEM201	NA	NA	NA	intronic	ENSG00000188807	NA	NA	NA	NA	NA	1p36.22	NA	NA	NA	NA	rs9430181	0.78	0.78	0.753	0.773762	0.8141	0.7212	0.8948	0.7057	0.7924	0.81	0.74	0.89	0.73	0.8129	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.694515	NA	NA	0.820349	0.733318	NA	0.609	NA	1.552651
1497	7	106786952	106786952	T	C	intronic	PRKAR2B	NA	NA	NA	intronic	ENSG00000005249	NA	NA	NA	NA	NA	7q22.3	NA	NA	NA	NA	rs3729876	0.88	0.88	0.873	0.880192	0.8161	0.9157	0.8977	0.9395	0.817	0.81	0.93	0.87	0.95	0.8272	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.278716	NA	NA	0.80407	0.930322	NA	0.92	NA	1.55263
1497	2	29226559	29226559	C	T	intronic	FAM179A	NA	NA	NA	intronic	ENSG00000189350	NA	NA	NA	NA	NA	2p23.2	NA	NA	NA	NA	rs12619829	0.68	0.68	0.665	0.650359	0.8221	0.6677	0.7666	0.4228	0.681	0.81	0.65	0.78	0.46	0.7742	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.151816	NA	NA	0.856953	0.516393	NA	0.732	NA	1.546747
1497	12	16050808	16050808	T	A	intronic	STRAP	NA	NA	NA	intronic	ENSG00000023734	NA	NA	NA	NA	NA	12p12.3	NA	NA	NA	NA	rs10772879	0.69	0.69	0.661	0.670128	0.833	0.8552	0.634	0.2663	0.8834	0.83	0.85	0.66	0.29	0.7894	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.837544	1.837544	NA	0.831742	0.365166	NA	0.638	NA	1.545858
1497	3	125874388	125874388	C	T	intronic	ALDH1L1	NA	NA	NA	intronic	ENSG00000144908	NA	NA	NA	NA	NA	3q21.3	NA	NA	NA	NA	rs2276731	0.79	0.79	0.785	0.819089	0.8111	0.7391	0.781	0.8487	0.8967	0.81	0.74	0.77	0.85	0.8304	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.052547	NA	NA	0.812863	0.847481	NA	0.826	NA	1.545637
1498	10	13158262	13158262	C	T	intronic	OPTN	NA	NA	NA	intronic	ENSG00000123240	NA	NA	NA	NA	NA	10p13	NA	NA	NA	NA	rs2244380	0.8	0.8	0.786	0.803914	0.8181	0.745	0.8631	0.829	0.774	0.82	0.71	0.85	0.81	0.8156	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.041089	NA	NA	0.821977	0.812982	NA	0.746	NA	1.544323
1498	7	150747746	150747746	A	G	intronic	ASIC3	NA	NA	NA	intronic	ENSG00000213199	NA	NA	NA	NA	NA	7q36.1	NA	NA	NA	NA	rs2288645	0.87	0.87	0.848	0.846645	0.83	0.7728	0.8905	0.9448	0.7761	0.84	0.81	0.87	0.95	0.8248	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.499456	NA	NA	0.803488	0.924875	NA	0.812	NA	1.541712
1498	17	7979463	7979463	A	G	intronic	ALOX12B	NA	NA	NA	intronic	ENSG00000179477	NA	NA	NA	NA	NA	17p13.1	NA	NA	NA	NA	rs2289586	0.86	0.86	0.877	0.867212	0.8022	0.8224	0.8343	0.9713	0.863	0.81	0.85	0.83	0.97	0.8421	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.818416	NA	NA	0.814767	0.950522	NA	0.913	NA	1.540933
1498	19	51128856	51128856	A	C	intronic	SYT3	NA	NA	NA	intronic	ENSG00000213023	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs10426057	0.71	0.71	0.685	0.704073	0.835	0.3085	0.7853	0.8971	0.6585	0.84	0.3	0.79	0.91	0.7824	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.338358	NA	NA	0.842173	0.883795	NA	0.819	NA	1.540427
1498	7	55499058	55499058	A	G	UTR3	LANCL2	NM_018697:c.*45A>G	NA	NA	UTR3	ENSG00000132434	ENST00000254770:c.*45A>G,ENST00000452107:c.*1378A>G	NA	NA	NA	NA	7p11.2	NA	NA	NA	NA	rs815988	0.96	0.96	0.972	0.96905	0.9215	1	0.9467	0.9955	0.9663	0.92	1	0.95	1	0.9441	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.296946	NA	NA	0.929419	0.984793	NA	1	NA	1.5383144
1498	3	138091701	138091701	G	T	intronic	MRAS	NA	NA	NA	intronic	ENSG00000158186	NA	NA	NA	NA	NA	3q22.3	NA	NA	NA	NA	rs1199333	0.89	0.89	0.899	0.884185	0.8191	0.9673	0.8631	0.9387	0.8067	0.83	0.97	0.83	0.93	0.8317	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.702937	NA	NA	0.813953	0.898547	NA	0.891	NA	1.535247
1499	1	227288655	227288655	G	A	intronic	CDC42BPA	NA	NA	NA	intronic	ENSG00000143776	NA	NA	NA	NA	NA	1q42.13	NA	NA	NA	NA	rs2104863	0.83	0.83	0.83	0.834864	0.8111	0.872	0.8343	0.8366	0.819	0.81	0.89	0.84	0.8	0.8345	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.355629	NA	NA	0.824315	0.831589	NA	0.855	NA	1.530085
1499	8	139767349	139767349	T	C	intronic	COL22A1	NA	NA	NA	intronic	ENSG00000169436	NA	NA	NA	NA	NA	8q24.23	NA	NA	NA	NA	rs2318338	0.86	0.86	0.85	0.879593	0.7992	0.9762	0.889	0.8086	0.9519	0.79	0.98	0.88	0.81	0.8554	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.457727	NA	NA	0.815581	0.823877	NA	0.725	NA	1.529819
1499	21	35124253	35124253	A	G	intronic	ITSN1	NA	NA	NA	intronic	ENSG00000205726,ENSG00000249209	NA	NA	NA	NA	NA	21q22.11	NA	NA	NA	NA	rs2834255	0.89	0.89	0.892	0.889776	0.826	0.9871	0.8775	0.8956	0.8558	0.82	0.99	0.87	0.89	0.8441	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.007966	NA	NA	0.80093	0.875624	NA	0.92	NA	1.52897
1499	8	2967639	2967639	G	T	intronic	CSMD1	NA	NA	NA	intronic	ENSG00000183117	NA	NA	NA	NA	NA	8p23.2	NA	NA	NA	NA	rs898512	0.8	0.8	0.78	0.809505	0.8141	0.9464	0.8501	0.5847	0.9387	0.8	0.96	0.86	0.58	0.8386	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.334386	NA	NA	0.818691	0.63525	NA	0.862	NA	1.528609
1499	5	150413406	150413406	A	C	intronic	TNIP1	NA	NA	NA	intronic	ENSG00000145901	NA	NA	NA	NA	NA	5q33.1	NA	NA	NA	NA	rs2233305	0.78	0.78	0.741	0.747204	0.8201	0.9464	0.8415	0.5068	0.7249	0.82	0.94	0.81	0.5	0.8147	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.330467	NA	NA	0.836744	0.585111	NA	0.594	NA	1.528456
1499	1	151402045	151402045	A	G	intronic	POGZ	NA	NA	NA	intronic	ENSG00000143442	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs6587577	0.76	0.76	0.756	0.758986	0.8539	0.6825	0.6902	0.7534	0.7965	0.85	0.65	0.71	0.79	0.7931	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.632741	NA	NA	0.82686	0.753064	NA	0.79	NA	1.52614
1499	16	75277344	75277344	A	T	intronic	BCAR1	NA	NA	NA	intronic	ENSG00000050820	NA	NA	NA	NA	NA	16q23.1	NA	NA	NA	NA	rs4888363	0.85	0.85	0.827	0.855831	0.8151	0.9802	0.889	0.7148	0.9366	0.81	0.98	0.87	0.73	0.857	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.636584	NA	NA	0.802671	0.715844	NA	0.826	NA	1.525229
1499	18	56274514	56274514	A	G	intronic	ALPK2	NA	NA	NA	intronic	ENSG00000198796	NA	NA	NA	NA	NA	18q21.32	NA	NA	NA	NA	rs6566986	0.91	0.91	0.921	0.936901	0.8191	1	0.902	0.9743	0.9673	0.82	1	0.9	0.97	0.8619	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.723123	1.723123	NA	0.793788	0.935657	NA	0.833	NA	1.525212
1500	2	160833188	160833188	A	G	intronic	PLA2R1	NA	NA	NA	intronic	ENSG00000153246	NA	NA	NA	NA	NA	2q24.2	NA	NA	NA	NA	rs2715918	0.86	0.86	0.858	0.819888	0.828	0.8611	0.8588	0.9062	0.6247	0.82	0.87	0.87	0.91	0.8154	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.384591	NA	NA	0.83186	0.88266	NA	0.797	NA	1.52474
1500	15	31244263	31244263	C	T	intronic	MTMR10	NA	NA	NA	intronic	ENSG00000166912	NA	NA	NA	NA	NA	15q13.3	NA	NA	NA	NA	rs2955789	0.83	0.83	0.81	0.834265	0.8101	0.9782	0.8444	0.7073	0.8753	0.81	0.97	0.8	0.69	0.8418	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.060239	NA	NA	0.82778	0.723691	NA	0.877	NA	1.52032
1500	11	11989899	11989899	T	C	intronic	DKK3	NA	NA	NA	intronic	ENSG00000050165	NA	NA	NA	NA	NA	11p15.3	NA	NA	NA	NA	rs2291599	0.84	0.84	0.803	0.857228	0.831	0.7113	0.9222	0.9493	0.864	0.82	0.71	0.91	0.95	0.8301	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.212404	NA	NA	0.818817	0.932303	NA	0.92	NA	1.520083
1500	8	62475276	62475276	C	T	intronic	ASPH	NA	NA	NA	intronic	ENSG00000198363	NA	NA	NA	NA	NA	8q12.3	NA	NA	NA	NA	rs3802286	0.76	0.76	0.747	0.766973	0.828	0.6151	0.7695	0.7776	0.8446	0.84	0.62	0.81	0.76	0.816	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.916414	NA	NA	0.83907	0.777349	NA	0.833	NA	1.51693
1500	2	86359405	86359405	G	T	intronic	PTCD3	NA	NA	NA	intronic	ENSG00000132300	NA	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs1559515	0.69	0.69	0.656	0.678115	0.84	0.6567	0.8271	0.3873	0.8211	0.84	0.67	0.85	0.36	0.7985	0.85	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.36122	NA	NA	0.845814	0.465502	NA	0.71	NA	1.515686
1501	17	17035036	17035036	A	G	intronic	MPRIP	NA	NA	NA	intronic	ENSG00000133030	NA	NA	NA	NA	NA	17p11.2	NA	NA	NA	NA	rs2271520	0.88	0.88	0.885	0.874002	0.836	0.994	0.8487	0.8328	0.863	0.84	0.99	0.85	0.83	0.8445	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.403394	NA	NA	0.806163	0.832274	NA	0.783	NA	1.513337
1501	11	110453009	110453009	G	A	intronic	ARHGAP20	NA	NA	NA	intronic	ENSG00000137727	NA	NA	NA	NA	NA	11q23.1	NA	NA	NA	NA	rs4079590	0.74	0.74	0.725	0.736222	0.8171	0.8254	0.8804	0.4932	0.7873	0.8	0.83	0.88	0.45	0.8213	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.745415	NA	NA	0.848883	0.574057	NA	0.659	NA	1.512717
1501	9	33270748	33270748	G	T	intronic	CHMP5	NA	NA	NA	intronic	ENSG00000086065	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs831271	0.79	0.79	0.776	0.792931	0.8201	0.8383	0.8213	0.7224	0.7935	0.83	0.83	0.79	0.71	0.8273	0.84	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.102163	NA	NA	0.840349	0.736269	NA	0.812	NA	1.512251
1501	5	36168582	36168582	T	C	intronic	SKP2	NA	NA	NA	intronic	ENSG00000145604	NA	NA	NA	NA	NA	5p13.2	NA	NA	NA	NA	rs7736391	0.61	0.61	0.591	0.580471	0.8569	0.4187	0.6758	0.3661	0.6851	0.87	0.39	0.71	0.39	0.7546	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.88585	NA	NA	0.877558	0.443259	NA	0.659	NA	1.510942
1501	12	57883801	57883801	G	A	intronic	MARS	NA	NA	NA	intronic	ENSG00000166986	NA	NA	NA	NA	NA	12q13.3	NA	NA	NA	NA	rs899653	0.66	0.66	0.622	0.627396	0.835	0.7232	0.8055	0.1702	0.8067	0.83	0.72	0.8	0.21	0.7882	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.756443	NA	NA	0.86593	0.276214	NA	0.609	NA	1.51087
1501	5	137241856	137241856	T	C	intronic	PKD2L2	NA	NA	NA	intronic	ENSG00000078795	NA	NA	NA	NA	NA	5q31.2	NA	NA	NA	NA	rs700605	0.8	0.8	0.802	0.802716	0.8201	0.9534	0.8357	0.5651	0.9274	0.83	0.94	0.81	0.6	0.8343	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.407123	1.407123	NA	0.838099	0.6105	NA	0.732	NA	1.507501
1501	11	110452999	110452999	C	A	intronic	ARHGAP20	NA	NA	NA	intronic	ENSG00000137727	NA	NA	NA	NA	NA	11q23.1	NA	NA	NA	NA	rs2008772	0.76	0.76	0.745	0.763778	0.8171	0.8294	0.8847	0.5681	0.82	0.8	0.84	0.88	0.52	0.8299	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.803912	NA	NA	0.847604	0.632213	NA	0.696	NA	1.505396
1501	20	42814931	42814931	T	C	intronic	JPH2	NA	NA	NA	intronic	ENSG00000149596	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs6031442	0.86	0.86	0.849	0.862819	0.8231	0.8194	0.889	0.9425	0.8221	0.83	0.83	0.86	0.92	0.8472	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.939229	NA	NA	0.824419	0.929609	NA	0.812	NA	1.505281
1501	7	107875170	107875170	T	C	intronic	NRCAM	NA	NA	NA	intronic	ENSG00000091129	NA	NA	NA	NA	NA	7q31.1	NA	NA	NA	NA	rs1269633	0.86	0.86	0.86	0.844649	0.829	0.9812	0.8804	0.7693	0.7965	0.84	0.98	0.86	0.77	0.8413	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.758629	1.758629	NA	0.824651	0.783379	NA	0.819	NA	1.505049
1502	6	35258539	35258539	C	A	intronic	ZNF76	NA	NA	NA	UTR3	ENSG00000065029	ENST00000229405:c.*228C>A	NA	NA	NA	NA	6p21.31	NA	NA	NA	NA	rs763157	0.91	0.91	0.907	0.921126	0.8787	0.9891	0.9092	0.882	0.956	0.88	0.99	0.9	0.89	0.9039	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.674641	NA	NA	0.879651	0.876759	NA	0.841	NA	1.5044157
1502	13	20038584	20038584	A	G	intronic	TPTE2	NA	NA	NA	intronic	ENSG00000132958	NA	NA	NA	NA	NA	13q12.11	NA	NA	NA	NA	rs7339103	0.76	0.76	0.719	0.713259	0.8419	0.9554	0.7853	0.3351	0.7914	0.86	0.98	0.75	0.37	0.8123	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.287426	NA	NA	0.845044	0.431911	NA	0.732	NA	1.500756
1502	19	1032369	1032369	C	T	intronic	CNN2	NA	NA	NA	intronic	ENSG00000064666	NA	NA	NA	NA	NA	19p13.3	NA	NA	NA	NA	rs10401325	0.78	0.78	0.777	0.770966	0.833	0.8948	0.7738	0.5318	0.9008	0.84	0.9	0.82	0.52	0.8256	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.263502	NA	NA	0.845465	0.551521	NA	0.79	NA	1.495935
1502	7	104800939	104800939	C	T	intronic	SRPK2	NA	NA	NA	intronic	ENSG00000135250	NA	NA	NA	NA	NA	7q22.3	NA	NA	NA	NA	rs4730071	0.6	0.6	0.543	0.595248	0.8638	0.3681	0.7507	0.3737	0.7423	0.88	0.31	0.74	0.38	0.7658	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.645296	NA	NA	0.875116	0.455061	NA	0.522	NA	1.495284
1503	3	107938240	107938240	G	C	intronic	IFT57	NA	NA	NA	intronic	ENSG00000114446	NA	NA	NA	NA	NA	3q13.13	NA	NA	NA	NA	rs1289754	0.68	0.68	0.683	0.668131	0.8628	0.3879	0.7378	0.6823	0.6881	0.87	0.34	0.77	0.7	0.7814	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.302013	NA	NA	0.861047	0.702905	NA	0.775	NA	1.494753
1503	15	42564369	42564369	C	T	intronic	TMEM87A	NA	NA	NA	intronic	ENSG00000103978	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs4244587	0.63	0.63	0.698	0.64357	0.8648	0.8413	0.6254	0.3396	0.636	0.75	0.78	0.6	0.28	0.7835	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.553424	NA	NA	0.857343	0.441002	NA	NA	NA	1.494357
1503	8	107754583	107754583	T	G	intronic	OXR1	NA	NA	NA	intronic	ENSG00000164830	NA	NA	NA	NA	NA	8q23.1	NA	NA	NA	NA	rs1784468	0.9	0.9	0.91	0.910942	0.834	0.9534	0.902	0.9644	0.8804	0.83	0.95	0.91	0.96	0.8581	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.043509	NA	NA	0.816163	0.936223	NA	0.891	NA	1.491737
1504	9	132678195	132678195	G	A	intronic	FNBP1	NA	NA	NA	intronic	ENSG00000187239	NA	NA	NA	NA	NA	9q34.11	NA	NA	NA	NA	rs7867211	0.82	0.82	0.798	0.788139	0.8439	0.8938	0.8689	0.6634	0.7331	0.86	0.89	0.87	0.66	0.8239	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.518276	1.518276	NA	0.849066	0.706083	NA	0.848	NA	1.483134
1504	3	64527465	64527465	C	T	intronic	ADAMTS9	NA	NA	NA	intronic	ENSG00000163638	NA	NA	NA	NA	NA	3p14.1	NA	NA	NA	NA	rs1036917	NA	NA	0.718	0.563299	0.833	0.4742	0.5548	0.2504	0.8067	NA	NA	NA	NA	0.727	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.135222	NA	NA	0.958256	0.542896	NA	0.543	NA	1.481744
1504	9	94456643	94456643	G	C	intergenic	MIR3910-1,ROR2	dist=58000;dist=28235	NA	NA	UTR3	ENSG00000169071	ENST00000375715:c.*1C>G	NA	NA	NA	NA	9q22.31	NA	NA	NA	NA	rs923771	0.84	0.84	0.825	0.80611	0.7873	0.9167	0.8674	0.8033	0.6718	0.8	0.93	0.84	0.79	0.7842	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.323437	NA	NA	0.781203	0.816151	NA	0.754	NA	1.4806304
1504	1	176857347	176857347	A	G	intronic	ASTN1	NA	NA	NA	intronic	ENSG00000152092	NA	NA	NA	NA	NA	1q25.2	NA	NA	NA	NA	rs2072935	0.83	0.83	0.82	0.829073	0.8588	0.8006	0.7233	0.8601	0.8609	0.85	0.81	0.78	0.86	0.827	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.586226	NA	NA	0.833605	0.874035	NA	0.884	NA	1.480595
1504	4	55161254	55161254	C	T	intronic	PDGFRA	NA	NA	NA	intronic	ENSG00000134853,ENSG00000145216	NA	NA	NA	NA	NA	4q12	NA	NA	NA	NA	rs3733540	0.74	0.74	0.731	0.699081	0.8539	0.8274	0.7075	0.438	0.7546	0.85	0.83	0.74	0.46	0.8021	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.851502	NA	NA	0.863488	0.486609	NA	0.659	NA	1.480512
1504	11	61205434	61205434	G	A	intronic	SDHAF2	NA	NA	NA	intronic	ENSG00000167985,ENSG00000256591	NA	NA	NA	NA	NA	11q12.2	NA	NA	NA	NA	rs879647	0.76	0.76	0.716	0.718051	0.8529	0.9712	0.8372	0.292	0.8098	0.86	0.97	0.84	0.29	0.8195	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.953606	NA	NA	0.847755	0.371935	NA	0.659	NA	1.479845
1504	7	104785779	104785779	T	G	intronic	SRPK2	NA	NA	NA	intronic	ENSG00000135250	NA	NA	NA	NA	NA	7q22.3	NA	NA	NA	NA	rs7780887	0.62	0.62	0.571	0.629792	0.8648	0.4425	0.7579	0.4251	0.7669	0.88	0.37	0.75	0.43	0.7823	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.139415	NA	NA	0.875116	0.489101	NA	0.572	NA	1.477784
1504	13	110861785	110861785	C	G	intronic	COL4A1	NA	NA	NA	intronic	ENSG00000187498	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs645114	0.84	0.84	0.839	0.861222	0.8419	0.7867	0.8674	0.8918	0.9121	0.83	0.77	0.88	0.92	0.8452	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.988544	NA	NA	0.836668	0.876249	NA	0.891	NA	1.476232
1504	9	134465398	134465398	T	C	intronic	RAPGEF1	NA	NA	NA	intronic	ENSG00000107263	NA	NA	NA	NA	NA	9q34.13	NA	NA	NA	NA	rs3818581	0.84	0.84	0.825	0.85004	0.8449	0.7659	0.8386	0.9501	0.8149	0.84	0.78	0.81	0.93	0.8496	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.66916	NA	NA	0.830338	0.93251	NA	0.899	NA	1.475162
1505	8	139631650	139631650	A	G	intronic	COL22A1	NA	NA	NA	intronic	ENSG00000169436	NA	NA	NA	NA	NA	8q24.23	NA	NA	NA	NA	rs7009396	0.75	0.75	0.745	0.741613	0.8688	0.7788	0.7421	0.5439	0.8395	0.86	0.76	0.74	0.58	0.8032	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.007732	NA	NA	0.857558	0.600091	NA	0.645	NA	1.470442
1505	13	113792754	113792754	T	C	intronic	F10	NA	NA	NA	intronic	ENSG00000126218	NA	NA	NA	NA	NA	13q34	NA	NA	NA	NA	rs2251102	0.82	0.82	0.789	0.802716	0.8499	0.9018	0.8948	0.6225	0.8303	0.86	0.89	0.88	0.65	0.8359	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.064833	NA	NA	0.845283	0.671533	NA	0.855	NA	1.468917
1505	7	98513300	98513300	C	T	intronic	TRRAP	NA	NA	NA	intronic	ENSG00000196367	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs1859662	0.67	0.67	0.64	0.672524	0.8569	0.7569	0.7579	0.2466	0.911	0.86	0.74	0.73	0.26	0.8074	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.251027	NA	NA	0.870116	0.351112	NA	0.652	NA	1.465584
1506	19	46329438	46329438	G	A	intronic	SYMPK	NA	NA	NA	intronic	ENSG00000125755	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs7246155	0.86	0.86	0.861	0.855032	0.8419	0.9048	0.7666	0.8926	0.8292	0.84	0.91	0.8	0.88	0.8389	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.383217	NA	NA	0.854249	0.8925	NA	0.913	NA	1.464951
1506	4	8062689	8062689	T	C	intronic	ABLIM2	NA	NA	NA	intronic	ENSG00000163995	NA	NA	NA	NA	NA	4p16.1	NA	NA	NA	NA	rs6811028	0.82	0.82	0.908	0.917332	0.8429	0.9931	0.9121	0.8971	0.9468	0.76	0.87	0.83	0.84	0.8753	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.005081	NA	NA	0.818344	0.879261	NA	0.232	NA	1.463456
1506	14	64520416	64520416	G	A	intronic	SYNE2	NA	NA	NA	intronic	ENSG00000054654	NA	NA	NA	NA	NA	14q23.2	NA	NA	NA	NA	rs10138253	0.73	0.73	0.7	0.677716	0.8638	0.7778	0.7954	0.3464	0.7474	0.86	0.81	0.79	0.38	0.8092	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.017069	NA	NA	0.864713	0.470557	NA	0.696	NA	1.462287
1506	19	46332194	46332194	C	T	intronic	SYMPK	NA	NA	NA	intronic	ENSG00000125755	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs3745929	0.86	0.86	0.857	0.854832	0.8419	0.9048	0.7666	0.8926	0.8282	0.84	0.91	0.8	0.88	0.8446	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.101674	NA	NA	0.853023	0.892419	NA	0.928	NA	1.460477
1506	7	98500956	98500956	C	T	intronic	TRRAP	NA	NA	NA	intronic	ENSG00000196367	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs7777927	0.67	0.67	0.634	0.668331	0.8598	0.7659	0.7622	0.2179	0.9131	0.86	0.75	0.74	0.23	0.8103	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.118998	NA	NA	0.873023	0.329778	NA	0.652	NA	1.456877
1506	1	35561510	35561510	G	A	intronic	ZMYM1	NA	NA	NA	intronic	ENSG00000197056	NA	NA	NA	NA	NA	1p34.3	NA	NA	NA	NA	rs2101973	0.57	0.57	0.534	0.557508	0.8936	0.3522	0.6254	0.2496	0.7914	0.9	0.34	0.68	0.26	0.762	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.375799	NA	NA	0.88754	0.355525	NA	0.645	NA	1.45686
1506	19	46327185	46327185	G	C	intronic	SYMPK	NA	NA	NA	intronic	ENSG00000125755	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs7252416	0.86	0.86	0.858	0.854832	0.8419	0.9048	0.7666	0.8926	0.8282	0.84	0.91	0.8	0.88	0.8454	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.237436	NA	NA	0.856648	0.895629	NA	0.928	NA	1.456052
1507	3	57140108	57140108	G	A	intronic	IL17RD	NA	NA	NA	intronic	ENSG00000144730	NA	NA	NA	NA	NA	3p14.3	NA	NA	NA	NA	rs2035654	0.71	0.71	0.679	0.736821	0.8618	0.5119	0.8501	0.6172	0.9213	0.87	0.51	0.86	0.58	0.8248	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.368434	NA	NA	0.859535	0.659101	NA	0.754	NA	1.453865
1507	9	136561303	136561303	A	T	intronic	SARDH	NA	NA	NA	intronic	ENSG00000123453	NA	NA	NA	NA	NA	9q34.2	NA	NA	NA	NA	rs2502739	0.83	0.83	0.811	0.763978	0.8728	0.9375	0.8732	0.6112	0.6022	0.87	0.94	0.86	0.62	0.8172	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.233075	NA	NA	0.856279	0.652292	NA	0.739	NA	1.453721
1507	2	79350347	79350347	A	G	UTR3	REG1A	NM_002909:c.*6A>G	NA	NA	UTR3	ENSG00000115386	ENST00000233735:c.*6A>G	NA	NA	NA	NA	2p12	NA	NA	NA	NA	rs12228	0.98	0.98	0.985	0.986621	0.9563	1	0.9798	0.997	0.9949	0.96	1	0.98	1	0.9691	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.20971	NA	NA	0.956163	0.993645	NA	0.92	NA	1.4517704
1507	7	47840510	47840510	T	C	intronic	C7orf69,PKD1L1	NA	NA	NA	intronic	ENSG00000136273,ENSG00000136275,ENSG00000158683	NA	NA	NA	NA	NA	7p12.3	NA	NA	NA	NA	rs1466203	0.85	0.85	0.851	0.841054	0.8439	0.9226	0.8141	0.7988	0.8303	0.84	0.93	0.85	0.79	0.8465	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.836504	NA	NA	0.858107	0.818656	NA	0.877	NA	1.451493
1508	10	15729923	15729923	C	T	intronic	ITGA8	NA	NA	NA	intronic	ENSG00000077943	NA	NA	NA	NA	NA	10p13	NA	NA	NA	NA	rs1954181	0.77	0.77	0.746	0.758986	0.8588	0.7877	0.8862	0.5234	0.8548	0.86	0.78	0.86	0.54	0.8353	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.256064	NA	NA	0.86186	0.592374	NA	0.819	NA	1.44404
1508	2	90108778	90108778	G	T	intergenic	MIR4436A,LOC654342	dist=996810;dist=1715931	NA	NA	intronic	ENSG00000211626	NA	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs859745	0.7	0.7	0.642	0.680312	0.7455	0.8601	0.8127	0.3306	0.8067	0.73	0.89	0.81	0.33	0.7441	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.171217	NA	NA	0.733832	0.378656	NA	0.63	NA	1.4432347
1508	11	1217228	1217228	T	C	intergenic	MUC2,MUC5B	dist=112811;dist=27067	NA	NA	intergenic	ENSG00000215182,ENSG00000117983	dist=54867;dist=27068	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs28592983	0.61	0.61	0.567	0.639976	0.6292	0.3532	0.6571	0.9183	0.5583	0.63	0.28	0.64	0.93	0.6118	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.289973	NA	NA	0.652086	0.882454	NA	0.543	NA	1.4402474
1508	12	105534025	105534025	G	A	intronic	KIAA1033	NA	NA	NA	intronic	ENSG00000136051	NA	NA	NA	NA	NA	12q23.3	NA	NA	NA	NA	rs1196808	0.91	0.91	0.914	0.934105	0.8499	1	0.9179	0.9327	0.9663	0.85	1	0.91	0.92	0.8811	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.969316	NA	NA	0.829161	0.928218	NA	0.935	NA	1.439839
1508	22	22782394	22782394	A	G	intergenic	LOC96610,ZNF280B	dist=105070;dist=56378	NA	NA	downstream	ENSG00000211654	NA	NA	NA	NA	NA	22q11.22	NA	NA	NA	NA	rs165704	0.69	0.69	0.71	0.676318	0.6909	0.6111	0.5086	0.8631	0.5951	0.7	0.62	0.56	0.86	0.6717	0.86	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.76852	NA	NA	0.69764	0.82078	NA	0.623	NA	1.43976
1508	12	13142174	13142174	C	G	intronic	HEBP1	NA	NA	NA	intronic	ENSG00000013583	NA	NA	NA	NA	NA	12p13.1	NA	NA	NA	NA	rs850918	0.77	0.77	0.722	0.742612	0.8499	0.9792	0.8761	0.295	0.8988	0.86	0.98	0.87	0.33	0.844	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.406904	NA	NA	0.869186	0.381752	NA	0.674	NA	1.436914
1508	13	33635939	33635939	T	A	intronic	KL	NA	NA	NA	intronic	ENSG00000133116	NA	NA	NA	NA	NA	13q13.1	NA	NA	NA	NA	rs650439	0.78	0.78	0.757	0.757388	0.8787	0.6081	0.8473	0.7035	0.7955	0.89	0.61	0.85	0.74	0.818	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.636049	NA	NA	0.868023	0.731502	NA	0.804	NA	1.435277
1509	2	71891361	71891361	C	T	intronic	DYSF	NA	NA	NA	intronic	ENSG00000135636	NA	NA	NA	NA	NA	2p13.2	NA	NA	NA	NA	rs2303599	0.75	0.75	0.735	0.744808	0.8728	0.6935	0.6772	0.6747	0.8088	0.87	0.68	0.73	0.65	0.8202	0.87	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.798918	NA	NA	0.872093	0.6936	NA	0.703	NA	1.434907
1509	2	56216052	56216052	G	A	downstream	MIR216A	NA	NA	NA	ncRNA_intronic	ENSG00000226702,ENSG00000272180	NA	NA	NA	NA	NA	2p16.1	NA	NA	NA	NA	rs10865292	0.91	0.91	0.923	0.91853	0.9165	0.8651	0.9135	0.9614	0.9213	0.92	0.85	0.9	0.98	0.9087	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.414172	NA	NA	0.907035	0.961416	NA	0.862	NA	1.4344316
1509	1	153320334	153320334	T	C	intronic	PGLYRP4	NA	NA	NA	intronic	ENSG00000163218	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs3006457	0.85	0.85	0.84	0.84365	0.8767	0.9058	0.866	0.7451	0.863	0.89	0.89	0.86	0.73	0.8435	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.240541	NA	NA	0.851128	0.767136	NA	0.761	NA	1.428672
1509	15	66821174	66821174	G	C	intronic	ZWILCH	NA	NA	NA	intronic	ENSG00000174442	NA	NA	NA	NA	NA	15q22.31	NA	NA	NA	NA	rs6494580	0.9	0.9	0.901	0.927117	0.8668	0.9335	0.879	0.9909	0.9305	0.86	0.92	0.86	0.99	0.8686	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.015446	NA	NA	0.836474	0.967969	NA	0.804	NA	1.428126
1510	16	27777831	27777831	A	G	intronic	KIAA0556	NA	NA	NA	intronic	ENSG00000047578	NA	NA	NA	NA	NA	16p12.1	NA	NA	NA	NA	rs8043555	0.88	0.88	0.886	0.907149	0.8509	0.876	0.7853	0.9955	0.9642	0.86	0.87	0.8	0.99	0.8683	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.249497	1.249497	NA	0.858023	0.969504	NA	0.928	NA	1.422777
1510	15	64706259	64706259	G	A	intronic	TRIP4	NA	NA	NA	intronic	ENSG00000103671	NA	NA	NA	NA	NA	15q22.31	NA	NA	NA	NA	rs2046356	0.78	0.78	0.735	0.692093	0.8926	0.9514	0.8948	0.3336	0.5593	0.9	0.95	0.88	0.33	0.8029	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3.835887	3.835887	NA	0.882442	0.418066	NA	0.674	NA	1.422058
1510	10	5978411	5978411	T	C	intronic	FBXO18	NA	NA	NA	intronic	ENSG00000134452	NA	NA	NA	NA	NA	10p15.1	NA	NA	NA	NA	rs646406	0.87	0.87	0.862	0.829872	0.8588	0.8512	0.9236	0.8177	0.728	0.87	0.84	0.93	0.86	0.8536	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.286578	NA	NA	0.866163	0.833409	NA	0.848	NA	1.421437
1510	10	119029744	119029744	G	A	intronic	SLC18A2	NA	NA	NA	intronic	ENSG00000165646	NA	NA	NA	NA	NA	10q25.3	NA	NA	NA	NA	rs363272	0.75	0.75	0.745	0.722843	0.8797	0.5972	0.781	0.6558	0.7403	0.88	0.62	0.79	0.67	0.819	0.88	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.697468	NA	NA	0.881163	0.69655	NA	0.826	NA	1.420137
1511	11	1215698	1215698	A	G	intergenic	MUC2,MUC5B	dist=111281;dist=28597	NA	NA	intergenic	ENSG00000215182,ENSG00000117983	dist=53337;dist=28598	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs28452143	0.58	0.58	0.53	0.60024	0.6322	0.3552	0.6455	0.7693	0.5593	0.64	0.28	0.63	0.78	0.6363	0.78	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.89577	NA	NA	0.651867	0.769409	NA	0.428	NA	1.4129664
1511	5	160097429	160097429	T	C	intronic	ATP10B	NA	NA	NA	intronic	ENSG00000118322	NA	NA	NA	NA	NA	5q34	NA	NA	NA	NA	rs3828604	0.87	0.87	0.88	0.878195	0.8658	0.8938	0.7363	0.9327	0.9018	0.88	0.9	0.77	0.91	0.8566	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.192711	NA	NA	0.86567	0.930761	NA	0.906	NA	1.41193
1511	7	158566138	158566138	T	C	intronic	ESYT2	NA	NA	NA	intronic	ENSG00000117868	NA	NA	NA	NA	NA	7q36.3	NA	NA	NA	NA	rs842447	0.76	0.76	0.753	0.730431	0.8857	0.5258	0.8141	0.7292	0.7239	0.89	0.57	0.85	0.72	0.8217	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.821144	NA	NA	0.880814	0.755107	NA	0.812	NA	1.411786
1511	5	160097453	160097453	A	C	intronic	ATP10B	NA	NA	NA	intronic	ENSG00000118322	NA	NA	NA	NA	NA	5q34	NA	NA	NA	NA	rs1990888	0.87	0.87	0.882	0.877796	0.8658	0.8938	0.7363	0.9327	0.8998	0.88	0.9	0.77	0.91	0.8566	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.448248	NA	NA	0.866247	0.93035	NA	0.913	NA	1.411353
1512	1	57395251	57395251	T	C	intronic	C8B	NA	NA	NA	intronic	ENSG00000021852	NA	NA	NA	NA	NA	1p32.2	NA	NA	NA	NA	rs605648	0.87	0.87	0.85	0.880391	0.8608	0.9306	0.8905	0.7837	0.9724	0.86	0.92	0.89	0.8	0.8822	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.725183	NA	NA	0.855233	0.779846	NA	0.804	NA	1.401767
1512	5	466811	466811	T	C	intronic	EXOC3	NA	NA	NA	intronic	ENSG00000180104	NA	NA	NA	NA	NA	5p15.33	NA	NA	NA	NA	rs2434697	0.78	0.78	0.777	0.791134	0.8678	0.5694	0.804	0.9304	0.7434	0.86	0.54	0.82	0.92	0.8464	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.704567	NA	NA	0.884866	0.91898	NA	0.848	NA	1.400934
1512	12	123339712	123339712	A	G	intronic	HIP1R	NA	NA	NA	intronic	ENSG00000130787	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs2292138	0.82	0.82	0.784	0.785343	0.8648	0.7639	0.928	0.73	0.6994	0.87	0.75	0.91	0.74	0.841	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.229615	NA	NA	0.893364	0.765241	NA	0.848	NA	1.400836
1512	20	42302371	42302371	C	T	intronic	MYBL2	NA	NA	NA	intronic	ENSG00000101057	NA	NA	NA	NA	NA	20q13.12	NA	NA	NA	NA	rs826950	0.79	0.79	0.779	0.776558	0.8976	0.7956	0.8055	0.6256	0.816	0.89	0.77	0.82	0.64	0.829	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.312846	NA	NA	0.873179	0.667808	ID=COSN166531;OCCURENCE=2(haematopoietic_and_lymphoid_tissue)	0.819	NA	1.400221
1512	19	54627097	54627097	T	C	intronic	PRPF31	NA	NA	NA	ncRNA_exonic	ENSG00000237017	NA	NA	NA	NA	NA	19q13.42	NA	NA	NA	NA	rs2303557	0.92	0.92	0.921	0.911142	0.9901	0.7034	0.8905	0.9985	0.9407	0.99	0.75	0.93	0.99	0.9514	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.143864	NA	NA	0.991853	0.995678	NA	0.971	NA	1.3999803
1512	11	6416959	6416959	C	T	intronic	APBB1	NA	NA	NA	intronic	ENSG00000166313	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs1800606	0.91	0.91	0.912	0.877995	0.8797	0.9871	0.8429	0.9168	0.7362	0.89	0.99	0.84	0.88	0.8623	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.251377	NA	NA	0.860568	0.922535	NA	0.906	NA	1.397432
1513	7	89927191	89927191	T	A	intronic	C7orf63	NA	NA	NA	intronic	ENSG00000105792	NA	NA	NA	NA	NA	7q21.13	NA	NA	NA	NA	rs6465256	0.94	0.94	0.94	0.947684	0.8688	0.999	0.8991	0.9887	0.955	0.88	1	0.89	0.98	0.892	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.847702	NA	NA	0.845346	0.968344	NA	0.92	NA	1.393854
1513	7	89901039	89901039	A	C	intronic	C7orf63	NA	NA	NA	intronic	ENSG00000105792	NA	NA	NA	NA	NA	7q21.13	NA	NA	NA	NA	rs10280053	0.94	0.94	0.945	0.947883	0.8688	0.999	0.9006	0.9887	0.955	0.88	1	0.89	0.98	0.8924	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.263214	NA	NA	0.84515	0.967967	NA	0.92	NA	1.39365
1513	10	135020315	135020315	T	C	intronic	KNDC1	NA	NA	NA	intronic	ENSG00000171798	NA	NA	NA	NA	NA	10q26.3	NA	NA	NA	NA	rs3008375	0.78	0.78	0.777	0.762979	0.8897	0.7282	0.8242	0.6853	0.7301	0.88	0.75	0.82	0.64	0.829	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.639875	NA	NA	0.887791	0.722424	NA	0.848	NA	1.393509
1513	12	51740388	51740388	C	A	intronic	CELA1	NA	NA	NA	intronic	ENSG00000139610	NA	NA	NA	NA	NA	12q13.13	NA	NA	NA	NA	rs907354	0.78	0.78	0.937	0.888778	0.9443	0.8671	0.902	0.7958	0.9703	0.87	0.71	0.76	0.72	0.6922	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.06384	NA	NA	0.973919	0.845839	NA	0.551	NA	1.389581
1513	10	5924942	5924942	C	G	intronic	ANKRD16	NA	NA	NA	intronic	ENSG00000134461	NA	NA	NA	NA	NA	10p15.1	NA	NA	NA	NA	rs617165	0.88	0.88	0.884	0.865815	0.8648	0.8472	0.9308	0.91	0.7802	0.87	0.84	0.94	0.9	0.8716	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.309447	NA	NA	0.876512	0.916024	NA	0.855	NA	1.387088
1513	14	21488046	21488046	G	C	intronic	NDRG2	NA	NA	NA	intronic	ENSG00000165795	NA	NA	NA	NA	NA	14q11.2	NA	NA	NA	NA	rs1243448	0.92	0.92	0.914	0.910743	0.8668	0.998	0.8602	0.9274	0.8793	0.87	1	0.85	0.94	0.8855	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.122707	NA	NA	0.862093	0.904448	NA	0.986	NA	1.385607
1514	12	7069620	7069620	T	C	intronic	PTPN6	NA	NA	NA	intronic	ENSG00000111679	NA	NA	NA	NA	NA	12p13.31	NA	NA	NA	NA	rs759052	0.79	0.79	0.768	0.778155	0.8847	0.8661	0.853	0.5106	0.8865	0.89	0.86	0.83	0.54	0.8531	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.0914	NA	NA	0.879383	0.592515	NA	0.688	NA	1.382817
1514	5	176737720	176737720	A	G	intronic	MXD3	NA	NA	NA	intronic	ENSG00000213347	NA	NA	NA	NA	NA	5q35.3	NA	NA	NA	NA	rs13190036	0.8	0.8	0.818	0.792732	0.8926	0.4931	0.7939	0.9939	0.726	0.89	0.49	0.81	0.99	0.8347	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.922867	NA	NA	0.890814	0.976623	ID=COSN167650;OCCURENCE=1(large_intestine)	0.862	NA	1.381886
1514	5	482653	482653	T	C	intronic	SLC9A3	NA	NA	NA	intronic	ENSG00000066230	NA	NA	NA	NA	NA	5p15.33	NA	NA	NA	NA	rs3777230	0.79	0.79	0.777	0.802716	0.8757	0.5873	0.8141	0.9372	0.7597	0.87	0.55	0.83	0.92	0.8527	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.458876	NA	NA	0.89	0.925749	NA	0.848	NA	1.3816
1514	12	15656832	15656832	T	A	intronic	PTPRO	NA	NA	NA	intronic	ENSG00000151490	NA	NA	NA	NA	NA	12p12.3	NA	NA	NA	NA	rs4764199	0.78	0.78	0.765	0.786342	0.8857	0.626	0.879	0.7602	0.819	0.88	0.59	0.88	0.76	0.8496	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.296332	NA	NA	0.886522	0.7825	NA	0.797	NA	1.378178
1514	17	45896478	45896478	T	C	intronic	OSBPL7	NA	NA	NA	intronic	ENSG00000006025	NA	NA	NA	NA	NA	17q21.32	NA	NA	NA	NA	rs878171	0.75	0.75	0.735	0.734026	0.8897	0.7272	0.7507	0.587	0.7679	0.91	0.68	0.76	0.58	0.8343	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.820897	NA	NA	0.899186	0.653881	NA	0.783	NA	1.376814
1514	19	46318963	46318963	C	A	intronic	SYMPK	NA	NA	NA	intronic	ENSG00000125755	NA	NA	NA	NA	NA	19q13.32	NA	NA	NA	NA	rs3810331	0.88	0.88	0.868	0.865815	0.8777	0.8948	0.7867	0.9047	0.8272	0.88	0.91	0.82	0.89	0.8637	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.404002	NA	NA	0.881805	0.906633	NA	0.138	NA	1.376795
1515	8	22020294	22020294	C	A	intronic	SFTPC	NA	NA	NA	intronic	ENSG00000168484	NA	NA	NA	NA	NA	8p21.3	NA	NA	NA	NA	rs2070684	0.7	0.7	0.676	0.676318	0.8897	0.7123	0.6988	0.3487	0.8466	0.89	0.7	0.75	0.37	0.8208	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.178101	NA	NA	0.916313	0.463273	NA	0.674	NA	1.373187
1515	5	230980	230980	A	G	intronic	SDHA	NA	NA	NA	intronic	ENSG00000073578	NA	NA	NA	NA	NA	5p15.33	NA	NA	NA	NA	rs2288461	0.86	0.86	0.847	0.858427	0.8688	0.628	0.8689	0.9879	0.9029	0.88	0.69	0.88	0.99	0.881	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.195164	NA	NA	0.881744	0.972764	NA	0.906	NA	1.368456
1515	10	135204799	135204799	C	T	intronic	PAOX	NA	NA	NA	intronic	ENSG00000148832,ENSG00000254536	NA	NA	NA	NA	NA	10q26.3	NA	NA	NA	NA	rs6537600	0.86	0.86	0.839	0.846246	0.8777	0.9812	0.8948	0.68	0.865	0.89	0.97	0.86	0.67	0.8813	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.329641	NA	NA	0.87407	0.732637	NA	0.906	NA	1.36693
1516	4	69687964	69687964	G	A	intronic	UGT2B10	NA	NA	NA	intronic	ENSG00000109181	NA	NA	NA	NA	NA	4q13.2	NA	NA	NA	NA	rs861340	0.7	0.7	0.663	0.67472	0.8996	0.6954	0.804	0.2579	0.8937	0.9	0.72	0.82	0.27	0.8393	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.742938	NA	NA	0.899884	0.392095	NA	0.529	NA	1.361216
1516	6	47681494	47681494	T	C	intronic	GPR115	NA	NA	NA	intronic	ENSG00000153294	NA	NA	NA	NA	NA	6p12.3	NA	NA	NA	NA	rs6916562	0.83	0.83	0.834	0.826278	0.8877	0.8661	0.9006	0.6823	0.864	0.87	0.87	0.9	0.68	0.8648	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.076955	NA	NA	0.886327	0.706043	NA	0.804	NA	1.361173
1516	1	20964328	20964328	A	G	intronic	PINK1	NA	NA	NA	intronic	ENSG00000158828	NA	NA	NA	NA	NA	1p36.12	NA	NA	NA	NA	rs2298298	0.83	0.83	0.813	0.821885	0.8976	0.8165	0.8026	0.7405	0.8732	0.89	0.82	0.84	0.74	0.8623	0.89	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.882095	NA	NA	0.880116	0.771675	NA	0.812	NA	1.359984
1516	8	51363078	51363078	C	T	intronic	SNTG1	NA	NA	NA	intronic	ENSG00000147481	NA	NA	NA	NA	NA	8q11.21	NA	NA	NA	NA	rs7817955	0.85	0.85	0.849	0.841454	0.8767	0.879	0.8228	0.8086	0.8241	0.88	0.85	0.83	0.82	0.8671	0.9	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.197317	NA	NA	0.900326	0.822969	NA	0.913	NA	1.355874
1516	9	130670652	130670652	A	G	UTR3	ST6GALNAC4	NM_175039:c.*19T>C,NM_175040:c.*19T>C	NA	NA	UTR3	ENSG00000136840	ENST00000335791:c.*19T>C,ENST00000343609:c.*19T>C	NA	NA	NA	NA	9q34.11	NA	NA	NA	NA	rs1043012	0.95	0.95	0.926	0.934904	0.999	0.994	0.9798	0.7708	0.998	1	0.99	0.98	0.78	0.9806	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.979743	NA	NA	0.998486	0.811647	NA	0.957	NA	1.3552474
1517	8	24211278	24211278	C	T	intronic	ADAM28	NA	NA	NA	ncRNA_intronic	ENSG00000253535	NA	NA	NA	NA	NA	8p21.2	NA	NA	NA	NA	rs7815643	0.99	0.99	0.987	0.965855	0.999	1	0.9914	0.9168	0.9448	1	1	0.99	0.95	0.9863	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.189458	NA	NA	0.99593	0.941443	NA	0.993	NA	1.3521033
1517	2	201515939	201515939	T	C	intronic	AOX1	NA	NA	NA	intronic	ENSG00000138356	NA	NA	NA	NA	NA	2q33.1	NA	NA	NA	NA	rs868810	0.79	0.79	0.807	0.79353	0.8917	0.506	0.8199	0.947	0.7628	0.88	0.53	0.84	0.93	0.8513	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.538302	NA	NA	0.906512	0.929187	ID=COSN166379;OCCURENCE=2(large_intestine)	0.746	NA	1.350488
1518	9	107566877	107566877	C	A	intronic	ABCA1	NA	NA	NA	intronic	ENSG00000165029	NA	NA	NA	NA	NA	9q31.1	NA	NA	NA	NA	rs2777801	0.9	0.9	0.897	0.88119	0.8877	0.997	0.9135	0.7784	0.8712	0.88	1	0.9	0.83	0.8842	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.061058	NA	NA	0.88407	0.800045	NA	0.855	NA	1.34403
1518	9	4844507	4844507	G	T	intronic	RCL1	NA	NA	NA	intronic	ENSG00000120158	NA	NA	NA	NA	NA	9p24.1	NA	NA	NA	NA	rs295259	0.92	0.92	0.903	0.908946	0.8827	0.996	0.9179	0.885	0.8722	0.89	1	0.92	0.88	0.8982	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.421569	NA	NA	0.875465	0.90059	NA	0.928	NA	1.343635
1518	6	168468186	168468186	G	T	intronic	FRMD1	NA	NA	NA	intronic	ENSG00000153303	NA	NA	NA	NA	NA	6q27	NA	NA	NA	NA	rs6906979	0.87	0.87	0.872	0.874401	0.8887	0.8413	0.8184	0.879	0.9274	0.89	0.87	0.8	0.91	0.8803	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.026292	NA	NA	0.889692	0.880058	NA	0.92	NA	1.341308
1518	9	4850421	4850421	C	G	intronic	RCL1	NA	NA	NA	intronic	ENSG00000120158	NA	NA	NA	NA	NA	9p24.1	NA	NA	NA	NA	rs455864	0.93	0.93	0.93	0.915735	0.8827	0.996	0.9193	0.9077	0.8753	0.89	1	0.93	0.94	0.9001	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.344842	NA	NA	0.877024	0.904974	NA	0.928	NA	1.340176
1518	1	201187828	201187828	T	C	intronic	IGFN1	NA	NA	NA	intronic	ENSG00000163395	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs3738268	0.93	0.93	0.921	0.929513	0.8946	0.997	0.8501	0.9592	0.9121	0.9	0.99	0.85	0.96	0.8908	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.585929	NA	NA	0.875495	0.948683	NA	0.964	NA	1.339105
1519	11	10526060	10526060	C	T	intronic	AMPD3	NA	NA	NA	intronic	ENSG00000133805	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs7943804	0.87	0.87	0.852	0.861821	0.8907	0.8641	0.9323	0.7708	0.9029	0.9	0.86	0.91	0.8	0.8835	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.502735	NA	NA	0.893922	0.818264	NA	0.855	NA	1.331878
1519	17	48151908	48151908	T	C	intronic	ITGA3	NA	NA	NA	intronic	ENSG00000005884	NA	NA	NA	NA	NA	17q21.33	NA	NA	NA	NA	rs4793639	0.8	0.8	0.803	0.76278	0.9026	0.5268	0.8617	0.8298	0.7014	0.91	0.58	0.89	0.84	0.8553	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.808991	NA	NA	0.914419	0.830005	ID=COSM148294;OCCURENCE=1(stomach)	0.804	NA	1.327681
1519	11	550028	550028	C	G	intronic	LRRC56	NA	NA	NA	intronic	ENSG00000161328	NA	NA	NA	NA	NA	11p15.5	NA	NA	NA	NA	rs11246180	0.87	0.87	0.879	0.852037	0.9036	0.9206	0.9236	0.7617	0.7996	0.91	0.91	0.89	0.76	0.8767	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.199933	NA	NA	0.893115	0.787335	NA	0.79	NA	1.326585
1519	7	50742118	50742118	A	G	intronic	GRB10	NA	NA	NA	intronic	ENSG00000106070	NA	NA	NA	NA	NA	7p12.1	NA	NA	NA	NA	rs2715128	0.92	0.92	0.906	0.913339	0.8996	0.9573	0.9323	0.9319	0.8436	0.9	0.94	0.91	0.94	0.8954	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.560821	NA	NA	0.879057	0.934399	NA	0.92	NA	1.325943
1520	20	48561893	48561893	A	G	intronic	RNF114	NA	NA	NA	intronic	ENSG00000124226	NA	NA	NA	NA	NA	20q13.13	NA	NA	NA	NA	rs4810993	0.92	0.92	0.924	0.93151	0.8857	0.9405	0.9207	0.9667	0.9294	0.87	0.93	0.91	0.98	0.9068	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4.445414	4.445414	NA	0.88593	0.950295	NA	0.942	NA	1.32157
1520	10	115412686	115412686	G	A	intronic	NRAP	NA	NA	NA	intronic	ENSG00000197893	NA	NA	NA	NA	NA	10q25.3	NA	NA	NA	NA	rs3121488	0.87	0.87	0.873	0.877796	0.8926	0.9038	0.9107	0.8109	0.9029	0.88	0.92	0.87	0.81	0.8955	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.223916	NA	NA	0.892093	0.825919	NA	0.725	NA	1.319807
1520	5	176004846	176004846	C	T	intronic	CDHR2	NA	NA	NA	intronic	ENSG00000074276	NA	NA	NA	NA	NA	5q35.2	NA	NA	NA	NA	rs1565149	0.83	0.83	0.808	0.809305	0.9095	0.8194	0.8991	0.6793	0.8078	0.92	0.81	0.93	0.65	0.8442	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.723579	NA	NA	0.927391	0.709941	NA	0.732	NA	1.318909
1520	15	42147206	42147206	T	C	intronic	SPTBN5	NA	NA	NA	intronic	ENSG00000137877	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs1648826	0.94	0.94	0.952	0.928315	0.8907	0.9921	0.9092	0.9826	0.8415	0.9	0.99	0.91	0.98	0.9026	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.385267	NA	NA	0.888033	0.967125	NA	0.899	NA	1.318667
1521	12	54932788	54932788	T	C	intronic	NCKAP1L	NA	NA	NA	intronic	ENSG00000123338	NA	NA	NA	NA	NA	12q13.2	NA	NA	NA	NA	rs4758966	0.91	0.91	0.906	0.889177	0.9016	0.9504	0.9222	0.8079	0.8998	0.91	0.96	0.93	0.82	0.8929	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.899534	NA	NA	0.891279	0.822969	NA	0.848	NA	1.314221
1521	1	155870416	155870416	G	A	intronic	RIT1	NA	NA	NA	intronic	ENSG00000143622	NA	NA	NA	NA	NA	1q22	NA	NA	NA	NA	rs1749409	0.8	0.8	0.771	0.779752	0.8926	0.9405	0.9078	0.4327	0.8763	0.9	0.93	0.91	0.44	0.8772	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.017684	NA	NA	0.920233	0.545847	NA	0.696	NA	1.309967
1521	1	155928232	155928232	T	C	intronic	ARHGEF2	NA	NA	NA	intronic	ENSG00000116584	NA	NA	NA	NA	NA	1q22	NA	NA	NA	NA	rs2364404	0.8	0.8	0.764	0.773962	0.8936	0.9405	0.9078	0.41	0.8763	0.9	0.93	0.91	0.41	0.8758	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.033826	NA	NA	0.920814	0.527009	NA	0.688	NA	1.309786
1521	12	109670468	109670468	T	C	intronic	ACACB	NA	NA	NA	intronic	ENSG00000076555	NA	NA	NA	NA	NA	12q24.11	NA	NA	NA	NA	rs3742027	0.87	0.87	0.869	0.866414	0.9076	0.7054	0.9337	0.9962	0.7669	0.91	0.67	0.92	1	0.8819	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.28086	NA	NA	0.902442	0.972764	NA	0.87	NA	1.308058
1521	7	158455089	158455089	G	A	intronic	NCAPG2	NA	NA	NA	intronic	ENSG00000146918	NA	NA	NA	NA	NA	7q36.3	NA	NA	NA	NA	rs4484634	0.94	0.94	0.939	0.960264	0.8907	0.9692	0.9654	0.9939	0.9734	0.89	0.96	0.96	0.99	0.9189	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.8166	NA	NA	0.88536	0.979989	NA	0.964	NA	1.30504
1522	1	197055925	197055925	T	C	intronic	ASPM	NA	NA	NA	intronic	ENSG00000066279	NA	NA	NA	NA	NA	1q31.3	NA	NA	NA	NA	rs10754213	0.82	0.82	0.78	0.782748	0.9135	1	0.8804	0.379	0.9008	0.92	1	0.9	0.4	0.8786	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.77118	NA	NA	0.907588	0.457519	NA	0.717	NA	1.300312
1522	14	71202650	71202650	C	T	intronic	MAP3K9	NA	NA	NA	intronic	ENSG00000006432	NA	NA	NA	NA	NA	14q24.2	NA	NA	NA	NA	rs4141095	0.85	0.85	0.849	0.860623	0.9165	0.7093	0.8761	0.9228	0.864	0.92	0.68	0.88	0.9	0.8882	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.290547	NA	NA	0.897209	0.920336	NA	0.92	NA	1.298091
1523	2	224777094	224777094	T	C	intronic	WDFY1	NA	NA	NA	intronic	ENSG00000085449	NA	NA	NA	NA	NA	2q36.1	NA	NA	NA	NA	rs541712	0.78	0.78	0.75	0.796126	0.9125	0.5843	0.8487	0.7829	0.8753	0.91	0.53	0.88	0.81	0.8682	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.722135	NA	NA	0.924419	0.810486	NA	0.862	NA	1.294881
1523	1	205890679	205890679	T	C	intronic	SLC26A9	NA	NA	NA	intronic	ENSG00000174502	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs12759719	0.9	0.9	0.898	0.914137	0.8926	0.8849	0.9395	0.9168	0.9448	0.9	0.89	0.93	0.9	0.915	0.93	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.502521	NA	NA	0.897558	0.917385	NA	0.877	NA	1.294842
1523	6	44274797	44274797	T	C	intronic	AARS2	NA	NA	NA	UTR3	ENSG00000272442	ENST00000438774:c.*25T>C,ENST00000505802:c.*25T>C	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs7740535	0.91	0.91	0.896	0.886781	0.9612	0.998	0.9524	0.6649	0.9489	0.96	1	0.95	0.7	0.9473	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.565949	NA	NA	0.966163	0.733545	NA	0.877	NA	1.2920037
1524	1	103496620	103496620	G	T	intronic	COL11A1	NA	NA	NA	UTR3	ENSG00000060718	ENST00000447608:c.*10C>A	NA	NA	NA	NA	1p21.1	NA	NA	NA	NA	rs7523441	0.94	0.94	0.939	0.943091	0.9662	1	0.9726	0.8313	0.9908	0.97	1	0.98	0.81	0.9594	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.579752	NA	NA	0.957308	0.85274	NA	0.928	NA	1.2837587
1524	2	24432667	24432667	C	G	intronic	ITSN2	NA	NA	NA	intronic	ENSG00000198399	NA	NA	NA	NA	NA	2p23.3	NA	NA	NA	NA	rs2303295	0.86	0.86	0.828	0.859625	0.9105	0.9196	0.9265	0.6838	0.9356	0.92	0.92	0.92	0.68	0.8981	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.11809	NA	NA	0.916395	0.692238	NA	0.841	NA	1.275005
1525	7	107820911	107820911	G	T	intronic	NRCAM	NA	NA	NA	intronic	ENSG00000091129	NA	NA	NA	NA	NA	7q31.1	NA	NA	NA	NA	rs414077	0.93	0.93	0.94	0.914936	0.9066	0.999	0.9222	0.8812	0.8773	0.91	1	0.91	0.9	0.9156	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.551145	NA	NA	0.907674	0.902179	NA	0.87	NA	1.270126
1525	7	98461062	98461062	G	A	intronic	TMEM130	NA	NA	NA	intronic	ENSG00000166448	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs1548622	0.87	0.87	0.858	0.875799	0.9095	0.876	0.8372	0.8222	0.9407	0.91	0.88	0.83	0.83	0.9041	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.9612	NA	NA	0.916376	0.854517	NA	0.884	NA	1.270024
1525	11	2940492	2940492	T	C	intronic	SLC22A18	NA	NA	NA	intronic	ENSG00000110628	NA	NA	NA	NA	NA	11p15.4	NA	NA	NA	NA	rs450244	0.92	0.92	0.903	0.906749	0.9145	0.8998	0.8487	0.9221	0.9264	0.92	0.9	0.9	0.94	0.9058	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.109418	NA	NA	0.909979	0.915266	NA	0.891	NA	1.269721
1525	7	98558880	98558880	G	C	intronic	TRRAP	NA	NA	NA	intronic	ENSG00000196367	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs160384	0.86	0.86	0.865	0.886981	0.9155	0.7847	0.853	0.9138	0.9509	0.91	0.76	0.85	0.9	0.9007	0.92	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.688239	NA	NA	0.918488	0.91103	NA	0.899	NA	1.265312
1526	15	73616635	73616635	T	C	intronic	HCN4	NA	NA	NA	intronic	ENSG00000138622	NA	NA	NA	NA	NA	15q24.1	NA	NA	NA	NA	rs481579	0.79	0.79	0.763	0.772963	0.9314	0.8135	0.9438	0.469	0.8579	0.94	0.81	0.94	0.44	0.8758	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.842972	NA	NA	0.931416	0.540301	NA	0.551	NA	1.261384
1526	1	115601615	115601615	A	G	intronic	TSPAN2	NA	NA	NA	intronic	ENSG00000134198	NA	NA	NA	NA	NA	1p13.2	NA	NA	NA	NA	rs7523818	0.96	0.96	0.96	0.965655	0.8986	1	0.964	0.9985	0.956	0.89	1	0.96	1	0.935	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.48506	NA	NA	0.908953	0.983205	NA	0.971	NA	1.257447
1527	3	52546487	52546487	C	T	intronic	STAB1	NA	NA	NA	intronic	ENSG00000010327	NA	NA	NA	NA	NA	3p21.1	NA	NA	NA	NA	rs7644763	0.94	0.94	0.947	0.955072	0.9095	0.9752	0.9078	0.9834	0.9765	0.91	0.98	0.89	0.99	0.9372	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.971617	1.971617	NA	0.91907	0.978665	NA	0.884	NA	1.23423
1527	9	130672221	130672221	C	T	intronic	ST6GALNAC4	NA	NA	NA	intronic	ENSG00000136840	NA	NA	NA	NA	NA	9q34.11	NA	NA	NA	NA	rs10739700	0.81	0.81	0.787	0.800519	0.9354	0.7867	0.8444	0.6165	0.8937	0.93	0.79	0.88	0.61	0.8896	0.94	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.477656	1.477656	NA	0.942648	0.669088	NA	0.768	NA	1.232352
1527	19	49216926	49216926	A	G	intronic	MAMSTR	NA	NA	NA	intronic	ENSG00000176909	NA	NA	NA	NA	NA	19q13.33	NA	NA	NA	NA	rs281384	0.91	0.91	0.938	0.879193	0.9245	0.8611	0.8588	0.9546	0.7638	0.92	0.86	0.9	0.97	0.9006	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.005734	NA	NA	0.943023	0.944848	NA	0.891	NA	1.231877
1527	2	85890771	85890771	T	G	intronic	SFTPB	NA	NA	NA	intronic	ENSG00000168878	NA	NA	NA	NA	NA	2p11.2	NA	NA	NA	NA	rs893159	0.97	0.97	0.957	0.97484	0.9225	0.999	0.9755	0.9977	0.9724	0.91	1	0.99	0.99	0.9365	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.55362	NA	NA	0.91277	0.982029	NA	0.913	NA	1.22823
1527	10	15154974	15154974	A	G	intronic	NMT2	NA	NA	NA	intronic	ENSG00000152465	NA	NA	NA	NA	NA	10p13	NA	NA	NA	NA	rs7072269	0.96	0.96	0.961	0.973642	0.9125	1	0.9597	0.997	0.9877	0.9	1	0.96	1	0.946	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.008383	NA	NA	0.914535	0.983886	NA	0.964	NA	1.226965
1528	3	52537969	52537969	T	C	intronic	STAB1	NA	NA	NA	intronic	ENSG00000010327	NA	NA	NA	NA	NA	3p21.1	NA	NA	NA	NA	rs4687545	0.95	0.95	0.95	0.960463	0.9135	0.9752	0.9207	0.9932	0.9775	0.91	0.98	0.91	0.99	0.9415	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.320033	NA	NA	0.927307	0.981802	NA	0.877	NA	1.217693
1528	1	16376278	16376278	G	A	intronic	CLCNKB	NA	NA	NA	intronic	ENSG00000184908	NA	NA	NA	NA	NA	1p36.13	NA	NA	NA	NA	rs7365182	0.86	0.86	0.841	0.827875	0.9384	0.999	0.9107	0.4856	0.9417	0.95	1	0.9	0.56	0.9106	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.03147	NA	NA	0.935465	0.572855	NA	0.783	NA	1.215535
1529	11	103091546	103091546	G	A	intronic	DYNC2H1	NA	NA	NA	intronic	ENSG00000187240	NA	NA	NA	NA	NA	11q22.3	NA	NA	NA	NA	rs670464	0.93	0.93	0.923	0.920927	0.9374	0.8859	0.9496	0.9478	0.8834	0.94	0.87	0.95	0.95	0.9261	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.493921	NA	NA	0.924994	0.943642	NA	0.899	NA	1.211506
1529	12	125453232	125453232	A	G	intronic	DHX37	NA	NA	NA	intronic	ENSG00000150990	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs10773130	0.94	0.94	0.944	0.946685	0.9274	0.9444	0.8199	0.9932	0.9959	0.94	0.95	0.87	0.99	0.9335	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.548526	NA	NA	0.931279	0.981843	NA	0.884	NA	1.207821
1529	9	36063743	36063743	C	G	intronic	RECK	NA	NA	NA	intronic	ENSG00000122707	NA	NA	NA	NA	NA	9p13.3	NA	NA	NA	NA	rs942478	0.85	0.85	0.867	0.859824	0.9294	0.7351	0.8689	0.8585	0.9121	0.93	0.72	0.89	0.85	0.9167	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.298021	NA	NA	0.946163	0.861552	NA	0.899	NA	1.207737
1530	11	12313887	12313887	C	G	intronic	MICALCL	NA	NA	NA	intronic	ENSG00000133808	NA	NA	NA	NA	NA	11p15.3	NA	NA	NA	NA	rs1874043	0.94	0.94	0.936	0.917532	0.9443	0.9415	0.9467	0.907	0.8589	0.95	0.95	0.93	0.9	0.9239	0.95	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.356099	NA	NA	0.927056	0.916285	NA	0.964	NA	1.204744
1530	12	93206878	93206878	G	A	intronic	EEA1	NA	NA	NA	intronic	ENSG00000102189	NA	NA	NA	NA	NA	12q22	NA	NA	NA	NA	rs3925797	0.92	0.92	0.91	0.915136	0.9433	0.9623	0.938	0.826	0.9417	0.94	0.96	0.94	0.83	0.9259	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.717022	NA	NA	0.92907	0.853088	NA	0.848	NA	1.20173
1530	17	4620497	4620497	C	T	intronic	ARRB2	NA	NA	NA	intronic	ENSG00000141480	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs7208257	0.91	0.91	0.919	0.91873	0.9314	1	0.915	0.8306	0.9438	0.94	1	0.92	0.77	0.9364	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.014018	NA	NA	0.931163	0.842261	NA	0.935	NA	1.201037
1530	10	50227870	50227870	C	T	intronic	VSTM4	NA	NA	NA	intronic	ENSG00000165633	NA	NA	NA	NA	NA	10q11.23	NA	NA	NA	NA	rs1913524	0.89	0.89	0.854	0.873403	0.9414	0.9702	0.9352	0.6808	0.9202	0.95	0.96	0.93	0.68	0.921	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.248505	NA	NA	0.939884	0.737631	NA	0.884	NA	1.197716
1531	10	49661341	49661341	A	G	intronic	ARHGAP22	NA	NA	NA	intronic	ENSG00000128805	NA	NA	NA	NA	NA	10q11.22	NA	NA	NA	NA	rs7092959	0.86	0.86	0.848	0.82488	0.9553	0.9891	0.928	0.5484	0.8221	0.96	0.99	0.92	0.51	0.9034	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.287028	1.287028	NA	0.947326	0.61734	NA	0.804	NA	1.193974
1532	9	79003440	79003440	G	A	intronic	RFK	NA	NA	NA	intronic	ENSG00000135002	NA	NA	NA	NA	NA	9q21.13	NA	NA	NA	NA	rs2501924	0.93	0.93	0.922	0.919728	0.9324	0.999	0.9582	0.8139	0.9407	0.93	1	0.96	0.84	0.9376	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.00562	NA	NA	0.945104	0.831366	NA	0.92	NA	1.184896
1533	2	138163391	138163391	T	C	intronic	THSD7B	NA	NA	NA	intronic	ENSG00000144229	NA	NA	NA	NA	NA	2q22.1	NA	NA	NA	NA	rs1551281	0.88	0.88	0.865	0.879792	0.9513	0.9762	0.9452	0.6505	0.9703	0.95	0.98	0.93	0.61	0.936	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.072436	NA	NA	0.948967	0.714794	NA	0.862	NA	1.163733
1533	2	224758906	224758906	C	T	intronic	WDFY1	NA	NA	NA	intronic	ENSG00000085449	NA	NA	NA	NA	NA	2q36.1	NA	NA	NA	NA	rs625150	0.89	0.89	0.88	0.910144	0.9433	0.8284	0.9496	0.8775	0.9765	0.94	0.79	0.94	0.9	0.9399	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.725732	NA	NA	0.956047	0.904902	NA	0.92	NA	1.160753
1533	20	3723091	3723091	A	G	intronic	HSPA12B	NA	NA	NA	intronic	ENSG00000132622	NA	NA	NA	NA	NA	20p13	NA	NA	NA	NA	rs611073	0.92	0.92	0.903	0.919529	0.9533	0.9137	0.9654	0.8207	0.9918	0.95	0.91	0.96	0.86	0.9422	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.49534	NA	NA	0.946512	0.858148	NA	0.848	NA	1.157988
1534	7	158528158	158528158	C	G	intronic	ESYT2	NA	NA	NA	intronic	ENSG00000117868	NA	NA	NA	NA	NA	7q36.3	NA	NA	NA	NA	rs3816461	0.93	0.93	0.923	0.913139	0.9592	0.9524	0.928	0.8268	0.9315	0.96	0.96	0.94	0.83	0.9374	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.562249	NA	NA	0.95093	0.842941	NA	0.899	NA	1.15247
1534	7	158528170	158528170	G	A	intronic	ESYT2	NA	NA	NA	intronic	ENSG00000117868	NA	NA	NA	NA	NA	7q36.3	NA	NA	NA	NA	rs7787974	0.93	0.93	0.929	0.91893	0.9612	0.9524	0.9265	0.8464	0.9335	0.96	0.96	0.94	0.85	0.9384	0.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.050248	NA	NA	0.951047	0.851339	NA	0.913	NA	1.149353
1534	1	110201580	110201580	C	T	intronic	GSTM4	NA	NA	NA	intronic	ENSG00000168765	NA	NA	NA	NA	NA	1p13.3	NA	NA	NA	NA	rs650985	0.98	0.98	0.976	0.979633	0.9513	1	0.9625	0.9932	0.9816	0.96	1	0.96	0.99	0.9586	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.321831	NA	NA	0.941512	0.98729	NA	0.87	NA	1.148588
1535	2	216243832	216243832	T	C	intronic	FN1	NA	NA	NA	intronic	ENSG00000115414	NA	NA	NA	NA	NA	2q35	NA	NA	NA	NA	rs1250204	0.94	0.94	0.931	0.9375	0.9493	0.999	0.964	0.8661	0.9397	0.96	1	0.95	0.85	0.9523	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.805686	NA	NA	0.95407	0.88039	NA	0.92	NA	1.14433
1535	1	200578093	200578093	G	A	intronic	KIF14	NA	NA	NA	intronic	ENSG00000118193	NA	NA	NA	NA	NA	1q32.1	NA	NA	NA	NA	rs2794409	0.92	0.92	0.905	0.912141	0.9662	0.871	0.8948	0.913	0.91	0.97	0.85	0.9	0.91	0.9305	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.125557	NA	NA	0.962096	0.920213	NA	0.913	NA	1.141204
1535	12	31132479	31132479	A	C	intronic	TSPAN11	NA	NA	NA	intronic	ENSG00000110900	NA	NA	NA	NA	NA	12p11.21	NA	NA	NA	NA	rs35096	0.95	0.95	0.948	0.946885	0.9523	0.9058	0.9496	0.9788	0.9387	0.95	0.91	0.94	0.97	0.9535	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.566534	NA	NA	0.957093	0.968225	NA	0.978	NA	1.137107
1536	6	44269023	44269023	T	C	intronic	AARS2	NA	NA	NA	intronic	ENSG00000124608,ENSG00000272442	NA	NA	NA	NA	NA	6p21.1	NA	NA	NA	NA	rs325007	0.89	0.89	0.869	0.867812	0.9612	0.998	0.9496	0.5915	0.953	0.96	1	0.95	0.6	0.9421	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.135287	NA	NA	0.966047	0.677485	NA	0.87	NA	1.130653
1536	3	111766559	111766559	T	G	intronic	TMPRSS7	NA	NA	NA	intronic	ENSG00000176040	NA	NA	NA	NA	NA	3q13.2	NA	NA	NA	NA	rs1688304	0.92	0.92	0.887	0.915335	0.9583	1	0.9611	0.7383	0.9908	0.96	1	0.95	0.73	0.9537	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.753757	NA	NA	0.960717	0.739884	NA	0.913	NA	1.127283
1537	9	131550722	131550722	C	G	intronic	TBC1D13	NA	NA	NA	intronic	ENSG00000107021	NA	NA	NA	NA	NA	9q34.11	NA	NA	NA	NA	rs1891076	0.94	0.94	0.953	0.944688	0.9583	0.9147	0.9697	0.9599	0.9233	0.96	0.9	0.96	0.97	0.9565	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.219407	NA	NA	0.961047	0.959828	NA	0.935	NA	1.124153
1537	1	3440647	3440647	T	C	intronic	MEGF6	NA	NA	NA	intronic	ENSG00000162591	NA	NA	NA	NA	NA	1p36.32	NA	NA	NA	NA	rs2794322	0.95	0.95	0.947	0.937899	0.9662	0.9137	0.9524	0.9516	0.9049	0.97	0.92	0.95	0.96	0.9493	0.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.696252	NA	NA	0.96266	0.95062	NA	0.899	NA	1.12184
1537	1	103461508	103461508	T	A	intronic	COL11A1	NA	NA	NA	intronic	ENSG00000060718	NA	NA	NA	NA	NA	1p21.1	NA	NA	NA	NA	rs2622867	0.92	0.92	0.91	0.923922	0.9662	1	0.964	0.7632	0.9908	0.97	1	0.97	0.72	0.9536	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.32777	NA	NA	0.960401	0.798457	NA	0.884	NA	1.119799
1538	9	78848542	78848542	C	G	intronic	PCSK5	NA	NA	NA	intronic	ENSG00000099139	NA	NA	NA	NA	NA	9q21.13	NA	NA	NA	NA	rs903545	0.97	0.97	0.957	0.952476	0.9642	0.999	0.9726	0.9289	0.91	0.97	1	0.97	0.93	0.9612	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.446844	NA	NA	0.965846	0.908105	NA	0.986	NA	1.108754
1539	7	101265350	101265350	T	C	intronic	MYL10	NA	NA	NA	intronic	ENSG00000106436	NA	NA	NA	NA	NA	7q22.1	NA	NA	NA	NA	rs4263675	0.98	0.98	0.976	0.986621	0.9553	0.999	0.9798	1	0.9928	0.95	1	0.97	1	0.9752	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.423028	NA	NA	0.967326	0.993872	NA	0.942	NA	1.102174
1539	1	175105942	175105942	G	A	intronic	TNN	NA	NA	NA	intronic	ENSG00000120332	NA	NA	NA	NA	NA	1q25.1	NA	NA	NA	NA	rs4650703	0.98	0.98	0.991	0.987819	0.9583	1	0.9827	0.9962	0.998	0.97	1	0.98	0.99	0.9758	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.453072	NA	NA	0.964651	0.990468	NA	0.993	NA	1.101249
1539	3	64518994	64518994	T	C	intronic	ADAMTS9	NA	NA	NA	intronic	ENSG00000163638	NA	NA	NA	NA	NA	3p14.1	NA	NA	NA	NA	rs1017537	0.96	0.96	0.95	0.961262	0.9622	1	0.9654	0.9047	0.9939	0.96	1	0.97	0.9	0.9706	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.707561	NA	NA	0.966977	0.889242	NA	0.971	NA	1.100223
1540	18	3272874	3272874	T	A	intronic	MYL12B	NA	NA	NA	intronic	ENSG00000118680	NA	NA	NA	NA	NA	18p11.31	NA	NA	NA	NA	rs7407072	0.94	0.94	0.903	0.928914	0.9751	0.8938	0.9035	0.9418	0.9182	0.98	0.88	0.93	0.93	0.9512	0.98	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.179044	NA	NA	0.979419	0.955515	NA	0.739	NA	1.094281
1540	7	80290369	80290369	A	G	intronic	CD36	NA	NA	NA	intronic	ENSG00000135218	NA	NA	NA	NA	NA	7q21.11	NA	NA	NA	NA	rs3211892	0.91	0.91	0.891	0.918331	0.9662	1	0.9669	0.7352	0.998	0.97	1	0.96	0.7	0.9649	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.153944	NA	NA	0.976163	0.811394	NA	0.899	NA	1.092737
1541	5	38962543	38962543	A	G	intronic	RICTOR	NA	NA	NA	intronic	ENSG00000164327	NA	NA	NA	NA	NA	5p13.1	NA	NA	NA	NA	rs7729745	0.96	0.96	0.963	0.9375	0.9861	0.9881	0.9726	0.8646	0.909	0.98	0.99	0.96	0.9	0.9641	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1.85678	1.85678	NA	0.978804	0.882856	NA	0.848	NA	1.070996
1541	15	41346092	41346092	T	C	intronic	INO80	NA	NA	NA	intronic	ENSG00000128908	NA	NA	NA	NA	NA	15q15.1	NA	NA	NA	NA	rs2899010	0.89	0.89	0.873	0.860823	0.993	0.999	0.951	0.5416	0.9499	0.99	1	0.95	0.56	0.9506	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.816638	NA	NA	0.986977	0.623468	NA	0.841	NA	1.069423
1542	4	177087322	177087322	C	T	intronic	WDR17	NA	NA	NA	intronic	ENSG00000150627	NA	NA	NA	NA	NA	4q34.2	NA	NA	NA	NA	rs4388031	0.96	0.96	0.952	0.95607	0.9831	1	0.9769	0.8616	0.9959	0.98	1	0.97	0.86	0.9767	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.034061	NA	NA	0.982674	0.887104	NA	0.906	NA	1.057526
1543	18	71930734	71930734	T	C	intronic	CYB5A	NA	NA	NA	intronic	ENSG00000166347	NA	NA	NA	NA	NA	18q22.3	NA	NA	NA	NA	rs2032262	0.95	0.95	0.939	0.922125	0.9911	0.994	0.9726	0.7882	0.9223	0.99	0.99	0.98	0.8	0.9695	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.378251	NA	NA	0.993605	0.828643	NA	0.877	NA	1.045795
1544	17	3475405	3475405	C	T	intronic	TRPV1	NA	NA	NA	intronic	ENSG00000196689,ENSG00000262304	NA	NA	NA	NA	NA	17p13.2	NA	NA	NA	NA	rs224549	0.88	0.88	0.857	0.867612	0.999	1	0.9697	0.5151	1	0.99	0.99	0.96	0.52	0.9636	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.847358	NA	NA	0.99832	0.610422	NA	0.87	NA	1.03908
1545	14	75415194	75415194	G	C	intronic	PGF	NA	NA	NA	intronic	ENSG00000119630	NA	NA	NA	NA	NA	14q24.3	NA	NA	NA	NA	rs2159907	0.99	0.99	0.993	0.99381	0.994	1	0.9885	1	0.9826	0.99	1	0.98	1	0.9899	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.351966	NA	NA	0.985116	0.998638	NA	0.993	NA	1.030984
1545	9	131392553	131392553	G	A	intronic	SPTAN1	NA	NA	NA	intronic	ENSG00000197694	NA	NA	NA	NA	NA	9q34.11	NA	NA	NA	NA	rs7866175	0.93	0.93	0.913	0.919329	1	0.9464	0.9712	0.7738	0.9683	1	0.95	0.97	0.78	0.9749	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.145773	NA	NA	0.998488	0.79823	NA	0.928	NA	1.026612
1546	9	130670903	130670903	C	A	intronic	ST6GALNAC4	NA	NA	NA	intronic	ENSG00000136840	NA	NA	NA	NA	NA	9q34.11	NA	NA	NA	NA	rs10760511	0.94	0.94	0.939	0.934704	0.999	0.994	0.9798	0.77	0.998	1	0.99	0.98	0.78	0.9811	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.074469	NA	NA	0.998487	0.817439	NA	0.957	NA	1.021413
1546	11	62397177	62397177	C	G	intronic	GANAB	NA	NA	NA	intronic	ENSG00000089597	NA	NA	NA	NA	NA	11q12.3	NA	NA	NA	NA	rs948683	0.95	0.95	0.944	0.95647	0.995	1	0.9841	0.848	0.999	0.99	1	0.99	0.81	0.9866	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-2.451158	NA	NA	0.998139	0.870799	NA	0.935	NA	1.020261
1547	1	160920813	160920813	A	G	intronic	ITLN2	NA	NA	NA	intronic	ENSG00000158764	NA	NA	NA	NA	NA	1q23.3	NA	NA	NA	NA	rs790059	1	1	0.998	0.999002	0.996	1	0.9986	1	1	1	1	1	1	0.9959	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.0676	NA	NA	0.994186	0.99773	NA	1	NA	1.013914
1547	12	120998481	120998481	G	A	intronic	RNF10	NA	NA	NA	intronic	ENSG00000022840	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs787949	0.98	0.98	0.979	0.96865	1	0.999	0.9928	0.8971	0.9847	1	1	0.99	0.91	0.9897	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.758644	NA	NA	0.998953	0.930549	NA	0.964	NA	1.011347
1547	1	151373200	151373200	T	C	intronic	PSMB4	NA	NA	NA	intronic	ENSG00000159377	NA	NA	NA	NA	NA	1q21.3	NA	NA	NA	NA	rs2495391	0.98	0.98	0.974	0.975839	1	1	0.9971	0.91	1	1	1	0.99	0.89	0.9923	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2.270097	2.270097	NA	0.999651	0.913073	NA	0.993	NA	1.008049
1548	4	3240526	3240526	A	G	intronic	HTT	NA	NA	NA	intronic	ENSG00000197386	NA	NA	NA	NA	NA	4p16.3	NA	NA	NA	NA	rs2858081	0.99	0.99	0.983	0.989018	1	0.999	0.9971	0.9607	1	1	1	0.99	0.95	0.9964	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.442937	NA	NA	0.999636	0.958866	NA	0.826	NA	1.003964
1548	17	73328773	73328773	T	C	intronic	GRB2	NA	NA	NA	intronic	ENSG00000177885	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs1529844	0.99	0.99	0.989	0.992013	1	1	0.9986	0.9705	1	1	1	1	0.96	0.9969	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.177768	NA	NA	0.999884	0.965048	NA	0.986	NA	1.003216
1548	17	73279700	73279700	C	T	intronic	SLC25A19	NA	NA	NA	intronic	ENSG00000125454	NA	NA	NA	NA	NA	17q25.1	NA	NA	NA	NA	rs4788882	0.99	0.99	0.989	0.992412	1	1	0.9971	0.9728	1	1	1	1	0.97	0.9976	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.037283	NA	NA	0.999884	0.97458	NA	0.993	NA	1.002516
1548	11	60783135	60783135	A	G	intronic	CD6	NA	NA	NA	intronic	ENSG00000013725	NA	NA	NA	NA	NA	11q12.2	NA	NA	NA	NA	rs3019557	1	1	0.998	0.996605	1	1	1	0.9871	1	1	1	1	0.99	0.9985	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.935771	NA	NA	0.999884	0.984567	NA	1	NA	1.001616
1548	12	123433137	123433137	T	C	intronic	ABCB9	NA	NA	NA	intronic	ENSG00000150967	NA	NA	NA	NA	NA	12q24.31	NA	NA	NA	NA	rs10848106	1	1	0.994	0.997005	1	1	1	0.9887	1	1	1	1	0.99	0.9992	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.143336	NA	NA	1	0.99228	NA	0.993	NA	1.0008
1549	19	56511082	56511082	C	G	upstream	NLRP5	NA	NA	NA	upstream	ENSG00000171487	NA	NA	NA	NA	NA	19q13.43	NA	NA	NA	NA	rs35427984	0.93	0.93	0.926	0.939696	0.9016	0.9276	0.9308	0.9939	0.9243	0.9	0.91	0.93	0.99	0.9199	0.99	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.856711	NA	NA	0.919771	0.983358	NA	0.804	NA	0.9253956
1550	2	101126124	101126124	T	A	intergenic	NMS,PDCL3	dist=26382;dist=53294	NA	NA	downstream	ENSG00000204637	NA	NA	NA	NA	NA	2q11.2	NA	NA	NA	NA	rs1829479	0.96	0.96	0.959	0.970847	0.9056	1	0.9597	0.9894	0.9908	0.92	1	0.96	0.99	0.9386	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-1.597584	NA	NA	0.913099	0.9775	NA	0.957	NA	0.742701
1551	7	4490854	4490854	C	T	intergenic	SDK1,FOXK1	dist=182223;dist=231076	NA	NA	intergenic	ENSG00000146555,ENSG00000261809	dist=182222;dist=60736	NA	NA	NA	NA	7p22.2	NA	NA	NA	NA	rs314605	0.8	0.8	0.799	0.790535	0.8996	0.7649	0.7291	0.7413	0.8149	0.9	0.73	0.77	0.76	0.8456	0.91	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	-0.200213	NA	NA	0.906328	0.772831	NA	0.783	NA	0.6818054